15	6.2	11.8	0.0	chr1	940285	940318	(248016104)	+	(GCC)n	Simple_repeat	1	38	(0)	1189
17	18.9	4.0	1.9	chr1	941911	941960	(248014462)	+	(CCG)n	Simple_repeat	1	52	(0)	1190
15	26.6	0.0	2.0	chr1	942055	942105	(248014317)	+	G-rich	Low_complexity	1	51	(0)	1191
11	27.7	0.0	0.0	chr1	1020686	1020724	(247935698)	+	G-rich	Low_complexity	1	39	(0)	1297
41	23.8	0.0	0.0	chr1	1063601	1063687	(247892735)	+	(GT)n	Simple_repeat	1	87	(0)	1328
14	18.0	0.0	7.8	chr1	1064152	1064202	(247892220)	+	(CCTGG)n	Simple_repeat	1	51	(0)	1329
1522	16.5	1.5	3.0	chr1	1109453	1109719	(247846703)	C	AluJo	SINE/Alu	(0)	312	50	1371
2888	19.3	8.0	0.0	chr1	1109720	1110352	(247846070)	C	MER49	LTR/ERV1	(235)	688	1	1372
39	15.8	3.1	6.7	chr1	1157282	1157345	(247799077)	+	(CAGCC)n	Simple_repeat	1	62	(0)	1419
94	0.0	0.0	0.0	chr1	1157346	1157428	(247798994)	+	(CCATCCCCG)n	Simple_repeat	1	83	(0)	1420
39	15.8	3.1	6.7	chr1	1157429	1157493	(247798929)	+	(CAGCC)n	Simple_repeat	3	64	(0)	1421
16	13.1	9.6	1.8	chr1	1284293	1284344	(247672078)	+	G-rich	Low_complexity	1	57	(0)	1558
16	13.1	0.0	0.0	chr1	1308541	1308565	(247647857)	+	(G)n	Simple_repeat	1	25	(0)	1576
12	31.5	0.0	0.0	chr1	1349764	1349810	(247606612)	+	G-rich	Low_complexity	1	47	(0)	1607
22	13.8	0.0	0.0	chr1	1597452	1597491	(247358931)	+	(CTCCCC)n	Simple_repeat	1	40	(0)	2032
34	11.7	0.0	5.6	chr1	1988802	1988873	(246967549)	+	(CCACCC)n	Simple_repeat	1	72	(0)	2704
397	11.6	14.8	0.0	chr1	1989071	1989156	(246967266)	+	LTR18B	LTR/ERVL	1	101	(244)	2705
12	25.0	0.0	4.3	chr1	2019496	2019542	(246936880)	+	G-rich	Low_complexity	1	47	(0)	2779
442	25.0	11.8	0.0	chr1	2176072	2176243	(246780179)	+	Tigger5	DNA/TcMar-Tigger	12	206	(2200)	2962
2507	5.0	0.0	1.7	chr1	2211901	2212201	(246744221)	C	AluY	SINE/Alu	(10)	301	6	3007
27	0.0	0.0	0.0	chr1	2315270	2315295	(246641127)	+	(GGGGGC)n	Simple_repeat	1	26	(0)	3110
24	29.7	2.1	1.0	chr1	2546203	2546298	(246410124)	+	G-rich	Low_complexity	1	98	(0)	3307
18	17.9	3.7	3.6	chr1	2546378	2546431	(246409991)	+	(CGC)n	Simple_repeat	1	56	(0)	3308
13	18.7	0.0	5.0	chr1	2585490	2585529	(246370893)	+	(GCTCTGG)n	Simple_repeat	1	40	(0)	3363
16	0.0	0.0	0.0	chr1	3900329	3900346	(245056076)	+	(C)n	Simple_repeat	1	18	(0)	4533
1670	13.0	11.0	0.4	chr1	6204557	6204825	(242751597)	+	AluJb	SINE/Alu	1	301	(11)	7829
212	32.4	7.5	0.9	chr1	6204853	6204964	(242751458)	C	L2b	LINE/L2	(15)	3360	3241	7830
283	25.3	6.7	0.0	chr1	6205242	6205324	(242751098)	C	MIR3	SINE/MIR	(84)	124	36	7831
2092	6.2	7.4	0.0	chr1	6205477	6205750	(242750672)	C	AluSz	SINE/Alu	(16)	296	1	7832
337	31.7	12.1	1.0	chr1	6354191	6354471	(242601951)	C	L2b	LINE/L2	(145)	3242	2933	8048
18	18.6	0.0	7.1	chr1	6613790	6613845	(242342577)	+	(CCG)n	Simple_repeat	1	56	(0)	8544
19	22.5	0.0	10.0	chr1	6613962	6614061	(242342361)	+	(CCGCCC)n	Simple_repeat	1	100	(0)	8545
16	21.6	0.0	0.0	chr1	6963256	6963287	(241993135)	+	(C)n	Simple_repeat	1	32	(0)	9195
18	16.5	6.2	0.0	chr1	7885887	7885934	(241070488)	+	(GGT)n	Simple_repeat	1	51	(0)	10476
342	29.3	9.5	0.0	chr1	7954837	7954969	(241001453)	C	L2a	LINE/L2	(16)	3410	3264	10637
442	26.3	9.9	0.0	chr1	8202685	8202802	(240753620)	+	L3	LINE/CR1	3836	3966	(133)	11154
493	34.4	12.2	0.0	chr1	8350361	8350633	(240605789)	+	LTR86C	LTR/ERVL	1	311	(310)	11509
17	8.9	0.0	0.0	chr1	8350636	8350659	(240605763)	+	(C)n	Simple_repeat	1	24	(0)	11510
299	30.6	13.5	2.4	chr1	8350662	8350872	(240605550)	+	LTR86C	LTR/ERVL	374	608	(13)	11509
30	0.0	0.0	0.0	chr1	8817827	8817854	(240138568)	+	(T)n	Simple_repeat	1	28	(0)	12308
12	31.0	0.0	1.9	chr1	8818008	8818060	(240138362)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	12309
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
692	27.0	5.1	2.8	chr1	9559097	9559382	(239397040)	+	L2a	LINE/L2	3134	3426	(0)	13893
231	21.8	11.4	7.3	chr1	9559535	9559643	(239396779)	C	L4_B_Mam	LINE/RTE-X	(225)	4716	4603	13894
276	23.3	1.6	0.0	chr1	9559733	9559792	(239396630)	+	L2	LINE/L2	2674	2734	(685)	13895
395	23.1	5.3	0.0	chr1	9629569	9629676	(239326746)	+	MIRb	SINE/MIR	87	200	(68)	14021
13	25.2	0.0	2.3	chr1	9687551	9687594	(239268828)	+	G-rich	Low_complexity	1	44	(0)	14179
2251	12.0	0.3	0.0	chr1	9736793	9737093	(239219329)	+	AluSx	SINE/Alu	2	303	(9)	14266
12	13.3	9.3	2.1	chr1	10033001	10033043	(238923379)	+	G-rich	Low_complexity	1	47	(0)	14941
15	20.4	0.0	2.4	chr1	10475135	10475175	(238481247)	+	(GCCCC)n	Simple_repeat	1	41	(0)	15885
21	17.8	0.0	0.0	chr1	10695550	10695604	(238260818)	+	(C)n	Simple_repeat	1	55	(0)	16229
27	29.9	1.5	9.7	chr1	10865898	10866161	(238090261)	+	A-rich	Low_complexity	1	268	(0)	16491
42	24.6	9.9	1.7	chr1	10865899	10866160	(238090262)	+	GA-rich	Low_complexity	1	288	(0)	16492
24	9.0	1.9	5.6	chr1	11654463	11654515	(237301907)	+	(CCCCG)n	Simple_repeat	1	54	(0)	18165
27	10.8	1.9	1.9	chr1	11654820	11654873	(237301549)	+	(GCGGG)n	Simple_repeat	1	54	(0)	18166
275	30.5	4.5	0.0	chr1	11934297	11934401	(237022021)	C	MIR	SINE/MIR	(36)	226	117	18775
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
14	21.9	2.3	2.2	chr1	11934781	11934824	(237021598)	+	(TGC)n	Simple_repeat	1	45	(0)	18777
1466	9.7	0.0	0.0	chr1	11971482	11971667	(236984755)	C	AluSx1	SINE/Alu	(126)	186	1	18869
465	20.5	2.4	13.5	chr1	12075463	12075654	(236880768)	C	MLT1D	LTR/ERVL-MaLR	(274)	231	62	19088
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
2475	9.3	0.3	0.0	chr1	12076088	12076399	(236880023)	C	AluSp	SINE/Alu	(0)	313	1	19101
2313	11.6	0.0	0.0	chr1	12147719	12148021	(236808401)	+	AluSz6	SINE/Alu	1	303	(9)	19260
374	31.8	5.4	7.7	chr1	12148132	12148326	(236808096)	C	MIRc	SINE/MIR	(60)	208	13	19261
203	30.6	5.1	6.7	chr1	12148403	12148521	(236807901)	C	MIRc	SINE/MIR	(65)	203	87	19262
2040	13.1	0.7	1.7	chr1	12148646	12148943	(236807479)	C	AluJo	SINE/Alu	(0)	312	18	19263
667	34.4	2.9	6.1	chr1	12158528	12159054	(236797368)	+	L1ME3Cz	LINE/L1	250	713	(284)	19283
33	3.1	0.0	0.0	chr1	12433918	12433950	(236522472)	+	(GA)n	Simple_repeat	1	33	(0)	19789
18	0.0	0.0	0.0	chr1	12433951	12433970	(236522452)	+	(TG)n	Simple_repeat	1	20	(0)	19790
14	0.0	0.0	0.0	chr1	12433970	12433987	(236522435)	+	(GGA)n	Simple_repeat	1	18	(0)	19791
38	4.9	0.0	0.0	chr1	12510514	12510555	(236445867)	+	(TG)n	Simple_repeat	1	42	(0)	19882
25	0.0	0.0	0.0	chr1	12617789	12617815	(236338607)	+	(A)n	Simple_repeat	1	27	(0)	20095
17	0.0	0.0	0.0	chr1	12617860	12617878	(236338544)	+	(A)n	Simple_repeat	1	19	(0)	20095
18	19.8	0.0	4.0	chr1	12618036	12618085	(236338337)	+	(CGCT)n	Simple_repeat	1	50	(0)	20096
12	19.5	5.9	3.7	chr1	13749182	13749232	(235207190)	+	(CCGG)n	Simple_repeat	1	54	(0)	21985
13	29.7	2.3	5.6	chr1	13749236	13749322	(235207100)	+	(CGC)n	Simple_repeat	1	89	(0)	21986
23	25.8	1.2	3.5	chr1	13749494	13749577	(235206845)	+	(GCCC)n	Simple_repeat	1	85	(0)	21987
467	23.1	16.8	3.9	chr1	14334655	14334834	(234621588)	C	MLT1F	LTR/ERVL-MaLR	(171)	377	170	22997
52	27.3	4.0	3.4	chr1	14334836	14334986	(234621436)	+	(ACAGAG)n	Simple_repeat	1	158	(0)	22998
2344	15.4	2.4	6.1	chr1	14334987	14335199	(234621223)	+	MSTB	LTR/ERVL-MaLR	1	198	(228)	22999
2354	11.6	0.0	0.0	chr1	14335200	14335502	(234620920)	C	AluSx	SINE/Alu	(9)	303	1	23000
354	27.4	4.0	5.2	chr1	15255302	15255455	(233700967)	C	L1ME4a	LINE/L1	(7)	6117	5966	24872
191	22.8	17.2	2.9	chr1	15255536	15255639	(233700783)	C	L2b	LINE/L2	(0)	3387	3266	24873
474	27.3	15.4	2.3	chr1	15255707	15255987	(233700435)	C	L2b	LINE/L2	(262)	3113	2776	24873
345	18.7	1.3	3.9	chr1	15409471	15409548	(233546874)	C	UCON78	DNA	(215)	228	153	25190
15	22.2	4.8	0.0	chr1	15409796	15409837	(233546585)	+	(CG)n	Simple_repeat	1	44	(0)	25191
620	24.8	10.3	4.0	chr1	15527392	15527622	(233428800)	C	MIRb	SINE/MIR	(0)	268	4	25474
1240	28.3	9.0	0.9	chr1	15543052	15543759	(233412663)	C	L2a	LINE/L2	(20)	3406	2647	25505
436	29.3	4.2	3.8	chr1	15543761	15543998	(233412424)	C	L2-1_AMi	LINE/L2	(540)	695	457	25506
41	0.0	0.0	0.0	chr1	15544152	15544186	(233412236)	+	(AC)n	Simple_repeat	1	35	(0)	25507
314	21.6	7.4	0.0	chr1	15544187	15544266	(233412156)	C	L1M5	LINE/L1	(515)	5609	5523	25508
11	21.7	6.0	1.9	chr1	15620507	15620556	(233335866)	+	(TTTCCA)n	Simple_repeat	1	53	(0)	25691
291	22.8	16.8	0.0	chr1	15620619	15620732	(233335690)	C	Charlie7a	DNA/hAT-Charlie	(0)	272	136	25692
247	19.2	5.6	12.3	chr1	15620768	15620913	(233335509)	C	Charlie7a	DNA/hAT-Charlie	(93)	179	40	25692
1744	14.2	5.7	3.1	chr1	15652059	15652347	(233304075)	C	AluJo	SINE/Alu	(5)	307	11	25759
1939	11.6	1.0	5.8	chr1	15652396	15652541	(233303881)	+	AluSx	SINE/Alu	1	135	(177)	25760
2483	8.0	0.0	0.6	chr1	15652542	15652854	(233303568)	+	AluY	SINE/Alu	1	311	(0)	25761
32	8.8	0.0	0.0	chr1	15847934	15847981	(233108441)	+	(GCC)n	Simple_repeat	1	48	(0)	26203
15	15.2	0.0	5.0	chr1	15848302	15848341	(233108081)	+	(GCGTCGG)n	Simple_repeat	1	40	(0)	26204
544	16.7	17.5	3.6	chr1	15900771	15900907	(233055515)	C	MER20	DNA/hAT-Charlie	(0)	219	60	26317
214	29.6	10.0	7.7	chr1	15900910	15901026	(233055396)	C	MIR3	SINE/MIR	(14)	194	75	26318
1092	19.6	13.1	2.3	chr1	15901070	15901358	(233055064)	+	AluJb	SINE/Alu	2	312	(0)	26319
257	24.3	18.8	0.0	chr1	16048793	16048900	(232907522)	+	MIR	SINE/MIR	45	169	(93)	26576
14	24.0	2.0	1.9	chr1	16167489	16167539	(232788883)	+	(AGGCAGG)n	Simple_repeat	1	52	(0)	26833
414	26.6	1.1	0.0	chr1	16171318	16171411	(232785011)	C	MIRc	SINE/MIR	(98)	170	76	26844
15	20.5	2.9	0.0	chr1	16171424	16171457	(232784965)	+	(GT)n	Simple_repeat	1	35	(0)	26845
1535	0.0	0.0	0.0	chr1	16514122	16514285	(232442137)	C	U1	snRNA	(1)	164	1	27677
2352	11.0	0.0	0.0	chr1	16640579	16640886	(232315536)	+	AluSq	SINE/Alu	4	311	(2)	27879
2348	8.6	0.0	2.2	chr1	16640887	16641199	(232315223)	+	AluY	SINE/Alu	1	306	(5)	27880
6364	9.3	2.8	5.9	chr1	16641200	16641930	(232314492)	+	L1MA2	LINE/L1	5610	6303	(1)	27878
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
271	25.2	5.5	5.5	chr1	16997240	16997348	(231959074)	C	MIRb	SINE/MIR	(45)	223	115	28440
2179	11.2	0.3	0.0	chr1	16997560	16997846	(231958576)	+	AluSx1	SINE/Alu	1	288	(24)	28441
2023	10.2	0.4	0.4	chr1	17010114	17010377	(231946045)	C	AluSz	SINE/Alu	(48)	264	1	28478
3020	20.9	7.6	8.9	chr1	17217494	17218401	(231738021)	+	MER63C	DNA/hAT-Blackjack	36	930	(0)	28938
1864	28.7	18.0	2.2	chr1	17218413	17220192	(231736230)	C	L2a	LINE/L2	(1208)	2211	89	28934
2091	12.2	0.0	2.3	chr1	17468991	17469292	(231487130)	C	AluSx	SINE/Alu	(16)	296	2	29476
2802	15.3	1.1	7.7	chr1	17469363	17469545	(231486877)	C	MER34C_	LTR/ERV1	(58)	527	372	29477
2224	10.0	2.3	0.0	chr1	17469546	17469845	(231486577)	+	AluSx1	SINE/Alu	1	307	(5)	29478
234	36.8	11.3	3.1	chr1	17588698	17588826	(231367596)	+	MIRb	SINE/MIR	47	187	(81)	29799
59	0.0	0.0	0.0	chr1	17588850	17588899	(231367523)	+	(GT)n	Simple_repeat	1	50	(0)	29800
310	30.4	11.0	1.5	chr1	17589050	17589195	(231367227)	+	MIR	SINE/MIR	2	161	(47)	29801
21	10.8	0.0	0.0	chr1	18528051	18528080	(230428342)	+	(G)n	Simple_repeat	1	30	(0)	31845
1790	17.3	0.3	0.7	chr1	18528151	18528445	(230427977)	+	AluJb	SINE/Alu	1	294	(18)	31846
246	19.2	0.0	1.9	chr1	18807646	18807698	(230148724)	C	L3	LINE/CR1	(113)	3986	3935	32463
269	29.8	3.5	0.0	chr1	18807745	18807848	(230148574)	C	MIRc	SINE/MIR	(66)	202	93	32464
1910	28.0	8.3	3.1	chr1	19135635	19136713	(229819709)	+	L1MEd	LINE/L1	1028	2167	(4919)	33125
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
363	27.5	0.0	4.1	chr1	19325322	19325483	(229630939)	C	MIRb	SINE/MIR	(92)	176	17	33440
245	32.6	2.1	0.0	chr1	19325822	19325916	(229630506)	C	L2b	LINE/L2	(6)	3369	3273	33441
13	5.3	0.0	0.0	chr1	19485439	19485458	(229470964)	+	(GGC)n	Simple_repeat	1	20	(0)	33724
32	20.1	6.7	2.4	chr1	19485680	19485798	(229470624)	+	(GCGGC)n	Simple_repeat	1	127	(0)	33725
316	20.4	18.8	2.5	chr1	19881921	19882082	(229074340)	+	MIRb	SINE/MIR	3	183	(25)	34716
15	18.2	0.0	4.9	chr1	19882621	19882661	(229073761)	+	(GCG)n	Simple_repeat	1	41	(0)	34717
661	30.0	7.4	0.0	chr1	20124389	20124588	(228831834)	C	MIRb	SINE/MIR	(8)	260	45	35142
187	27.1	5.9	0.0	chr1	20124638	20124685	(228831737)	C	MIR	SINE/MIR	(84)	178	128	35143
774	29.5	2.9	1.2	chr1	20476770	20477009	(228479413)	+	MIR	SINE/MIR	13	256	(6)	35867
190	25.6	0.0	0.0	chr1	20477029	20477071	(228479351)	C	MIR3	SINE/MIR	(117)	91	49	35868
477	26.8	11.6	1.3	chr1	20481898	20482095	(228474327)	C	MIRb	SINE/MIR	(48)	214	2	35876
2304	10.1	0.7	0.0	chr1	20515883	20516190	(228440232)	+	AluSp	SINE/Alu	1	310	(3)	35951
14176	5.2	4.3	6.1	chr1	20516191	20516512	(228439910)	+	HUERS-P1-int	LTR/ERV1	2369	2693	(3570)	35950
2196	9.1	2.4	0.7	chr1	20516513	20516797	(228439625)	+	AluSq2	SINE/Alu	1	290	(23)	35952
29	25.9	2.4	4.0	chr1	20787240	20787362	(228169060)	+	(CGCCGC)n	Simple_repeat	1	126	(0)	36557
455	31.8	8.1	4.8	chr1	21332928	21333178	(227623244)	C	MIRb	SINE/MIR	(0)	268	9	37691
15	13.9	0.0	0.0	chr1	21333335	21333358	(227623064)	+	(G)n	Simple_repeat	1	24	(0)	37692
2318	9.4	0.0	0.7	chr1	21333550	21333846	(227622576)	+	AluSz	SINE/Alu	1	295	(17)	37693
42	0.0	0.0	0.0	chr1	21345885	21345920	(227610502)	+	(TG)n	Simple_repeat	1	36	(0)	37718
20	0.0	0.0	0.0	chr1	21345921	21345942	(227610480)	+	(CG)n	Simple_repeat	1	22	(0)	37719
28	21.0	4.2	4.0	chr1	21346056	21346150	(227610272)	+	(TG)n	Simple_repeat	1	99	(0)	37720
47	0.0	0.0	0.0	chr1	21346175	21346214	(227610208)	+	(GT)n	Simple_repeat	1	40	(0)	37721
249	32.4	6.8	2.9	chr1	21352126	21352265	(227604157)	+	LTR103b_Mam	LTR/ERV1?	7	152	(396)	37734
16	0.0	0.0	4.2	chr1	21352561	21352584	(227603838)	+	(GTTT)n	Simple_repeat	1	24	(0)	37735
853	22.7	4.4	1.8	chr1	21352708	21352927	(227603495)	C	MIR	SINE/MIR	(0)	262	37	37736
18	28.1	2.3	3.4	chr1	21619402	21619488	(227336934)	+	(AGAGAC)n	Simple_repeat	1	89	(0)	38301
17	21.8	0.0	0.0	chr1	21651413	21651446	(227304976)	+	(CA)n	Simple_repeat	1	34	(0)	38383
18	12.4	13.1	3.2	chr1	21651542	21651569	(227304853)	+	(CACACAG)n	Simple_repeat	1	54	(41)	38384
22	15.1	0.0	0.0	chr1	21651570	21651606	(227304816)	+	(AC)n	Simple_repeat	1	37	(0)	38385
18	12.4	13.1	3.2	chr1	21651607	21651625	(227304797)	+	(CACACAG)n	Simple_repeat	55	95	(0)	38384
18	30.3	5.2	0.0	chr1	21651692	21651768	(227304654)	+	(CG)n	Simple_repeat	1	81	(0)	38386
14	16.9	0.0	2.9	chr1	21651749	21651783	(227304639)	+	(CGCCC)n	Simple_repeat	1	35	(0)	38387
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
200	27.9	4.8	4.8	chr1	21659612	21659694	(227296728)	C	MIRc	SINE/MIR	(64)	204	122	38410
15	26.0	0.0	3.7	chr1	21669299	21669352	(227287070)	+	(CCG)n	Simple_repeat	1	54	(0)	38431
13	4.2	8.0	0.0	chr1	21669458	21669482	(227286940)	+	(CCCCG)n	Simple_repeat	1	27	(0)	38432
463	23.6	0.8	0.0	chr1	21669510	21669632	(227286790)	C	MIR3	SINE/MIR	(61)	147	24	38433
195	36.1	3.2	14.8	chr1	21905067	21905149	(227051273)	+	L2a	LINE/L2	2842	2921	(498)	38919
43	5.8	1.9	0.0	chr1	21905150	21905203	(227051219)	+	(AC)n	Simple_repeat	1	55	(0)	38920
195	36.1	3.2	14.8	chr1	21905204	21905236	(227051186)	+	L2a	LINE/L2	2922	2935	(484)	38919
36	7.2	0.0	0.0	chr1	21905237	21905280	(227051142)	+	(AC)n	Simple_repeat	1	44	(0)	38921
274	28.8	7.9	3.7	chr1	21905281	21905457	(227050965)	+	L2a	LINE/L2	2936	3145	(281)	38919
2258	8.8	0.0	0.0	chr1	21905469	21905752	(227050670)	+	AluSq2	SINE/Alu	10	293	(20)	38922
278	28.1	3.3	0.0	chr1	21906752	21906840	(227049582)	+	MER103C	DNA/hAT-Charlie	200	291	(6)	38927
259	27.9	1.7	2.7	chr1	22025238	22025366	(226931056)	C	MIRb	SINE/MIR	(28)	180	60	39248
430	27.5	11.9	1.1	chr1	22025945	22026124	(226930298)	+	MIRb	SINE/MIR	58	259	(9)	39249
2471	7.2	0.0	0.3	chr1	22042475	22042779	(226913643)	C	AluY	SINE/Alu	(7)	304	1	39290
781	30.2	15.1	2.3	chr1	22042786	22043228	(226913194)	C	L2a	LINE/L2	(4)	3422	2913	39291
19	20.1	3.3	3.2	chr1	22053256	22053316	(226903106)	+	(GGCGG)n	Simple_repeat	1	63	(0)	39318
18	20.9	2.2	8.6	chr1	22053317	22053344	(226903078)	+	(GCG)n	Simple_repeat	3	93	(0)	39319
348	28.0	10.3	3.9	chr1	23117177	23117384	(225839038)	+	MIRb	SINE/MIR	7	229	(39)	41634
21	0.0	0.0	0.0	chr1	23117455	23117477	(225838945)	+	(CT)n	Simple_repeat	1	23	(0)	41635
18	4.7	0.0	0.0	chr1	23117508	23117529	(225838893)	+	(G)n	Simple_repeat	1	22	(0)	41636
879	12.5	0.0	0.0	chr1	23119252	23119396	(225837026)	C	AluJr4	SINE/Alu	(0)	312	163	41640
273	32.5	0.0	4.9	chr1	23119425	23119505	(225836917)	+	MIR3	SINE/MIR	47	123	(85)	41641
441	27.0	5.4	5.9	chr1	23119587	23119755	(225836667)	+	L2c	LINE/L2	3204	3371	(16)	41642
12	15.0	3.3	0.0	chr1	23344075	23344104	(225612318)	+	(CCACCC)n	Simple_repeat	1	31	(0)	42186
397	28.8	0.9	0.0	chr1	23484865	23484975	(225471447)	+	MIRb	SINE/MIR	76	187	(81)	42533
21	7.7	0.0	0.0	chr1	23531239	23531266	(225425156)	+	(T)n	Simple_repeat	1	28	(0)	42654
16	5.2	0.0	0.0	chr1	23531348	23531367	(225425055)	+	(C)n	Simple_repeat	1	20	(0)	42655
1956	16.4	0.0	0.3	chr1	23544010	23544308	(225412114)	+	AluJr	SINE/Alu	2	299	(13)	42694
399	27.3	5.4	1.4	chr1	23544326	23544466	(225411956)	C	MIRb	SINE/MIR	(52)	216	70	42695
712	29.5	4.3	0.0	chr1	23544478	23544701	(225411721)	C	MIR	SINE/MIR	(26)	236	3	42696
13	9.3	0.0	0.0	chr1	23554620	23554642	(225401780)	+	(GAAG)n	Simple_repeat	1	23	(0)	42729
16	7.1	3.1	3.0	chr1	23554882	23554913	(225401509)	+	(GAGCCA)n	Simple_repeat	1	33	(0)	42730
285	19.1	4.2	1.4	chr1	23558779	23558847	(225397575)	+	MIRc	SINE/MIR	65	135	(133)	42737
363	30.6	5.8	3.2	chr1	23638350	23638535	(225317887)	C	MIR	SINE/MIR	(37)	225	35	42959
16	21.7	0.0	0.0	chr1	23778331	23778362	(225178060)	+	(C)n	Simple_repeat	1	32	(0)	43345
12	11.3	6.9	0.0	chr1	23778451	23778479	(225177943)	+	(GAGGC)n	Simple_repeat	1	31	(0)	43346
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
2669	4.9	0.3	0.0	chr1	24313134	24313438	(224642984)	+	AluSp	SINE/Alu	1	306	(7)	44632
719	23.1	5.6	3.5	chr1	24325919	24326147	(224630275)	+	MIRc	SINE/MIR	30	263	(5)	44663
193	34.3	1.4	0.0	chr1	24326186	24326255	(224630167)	+	MIRb	SINE/MIR	190	260	(8)	44664
2384	7.7	0.0	0.7	chr1	24414048	24414345	(224542077)	C	AluSx1	SINE/Alu	(16)	296	1	44840
23	16.5	3.7	0.0	chr1	24502737	24502790	(224453632)	+	(CCCCCG)n	Simple_repeat	1	56	(0)	45043
26	0.0	0.0	0.0	chr1	24503164	24503188	(224453234)	+	(GCGGG)n	Simple_repeat	1	25	(0)	45044
22	0.0	0.0	0.0	chr1	24503214	24503237	(224453185)	+	(A)n	Simple_repeat	1	24	(0)	45045
2018	13.0	3.0	1.0	chr1	24597224	24597515	(224358907)	+	AluSx	SINE/Alu	1	298	(14)	45262
30	3.1	0.0	0.0	chr1	24597519	24597551	(224358871)	+	(AGGGGG)n	Simple_repeat	1	33	(0)	45263
91	2.4	4.7	0.8	chr1	24597582	24597709	(224358713)	+	(AAAG)n	Simple_repeat	1	134	(0)	45264
721	16.7	10.3	12.3	chr1	24597715	24597747	(224358675)	+	MER20	DNA/hAT-Charlie	4	32	(187)	45265
754	14.4	13.5	0.6	chr1	24597748	24597915	(224358507)	+	MER53	DNA/hAT	1	193	(0)	45266
721	16.7	10.3	12.3	chr1	24597916	24598100	(224358322)	+	MER20	DNA/hAT-Charlie	33	217	(2)	45265
1312	20.3	4.0	4.0	chr1	24598228	24598564	(224357858)	C	L1ME3A	LINE/L1	(7)	6166	5831	45267
2480	10.0	0.3	0.0	chr1	24704112	24704422	(224252000)	+	AluSx1	SINE/Alu	1	312	(0)	45516
290	30.5	7.1	1.9	chr1	24704519	24704625	(224251797)	C	MLT1O	LTR/ERVL-MaLR	(269)	273	161	45517
2018	13.6	0.7	1.9	chr1	24705041	24705348	(224251074)	C	AluJb	SINE/Alu	(8)	304	1	45518
373	23.2	10.7	0.5	chr1	24705760	24705905	(224250517)	+	MIRb	SINE/MIR	83	252	(16)	45519
24	17.9	1.4	5.6	chr1	24745451	24745520	(224210902)	+	(CAG)n	Simple_repeat	1	71	(0)	45644
20	16.5	5.4	1.7	chr1	25431020	25431075	(223525347)	+	(GCG)n	Simple_repeat	1	59	(0)	47148
16	23.9	2.0	0.0	chr1	25431353	25431401	(223525021)	+	G-rich	Low_complexity	1	50	(0)	47149
44	22.2	4.3	3.5	chr1	25616685	25616846	(223339576)	+	(CGG)n	Simple_repeat	1	169	(0)	47516
185	33.3	6.9	0.0	chr1	25804545	25804625	(223151797)	C	L3	LINE/CR1	(1)	4098	4012	47865
18	8.5	0.0	0.0	chr1	25804636	25804660	(223151762)	+	(C)n	Simple_repeat	1	25	(0)	47866
577	26.4	4.2	3.4	chr1	25804807	25804994	(223151428)	+	MIRb	SINE/MIR	3	199	(69)	47867
292	27.2	5.2	2.1	chr1	26037123	26037216	(222919206)	+	MIRb	SINE/MIR	64	160	(108)	48400
253	31.5	0.0	1.4	chr1	26057936	26058009	(222898413)	+	L2b	LINE/L2	3298	3370	(5)	48442
372	20.8	7.0	6.2	chr1	26058032	26058144	(222898278)	+	L2c	LINE/L2	3264	3377	(10)	48443
710	25.8	2.1	0.6	chr1	26058154	26058336	(222898086)	C	MIRc	SINE/MIR	(28)	240	55	48444
15	19.1	0.0	6.4	chr1	26111803	26111849	(222844573)	+	(CGG)n	Simple_repeat	1	47	(0)	48599
15	18.9	0.0	0.0	chr1	26112086	26112121	(222844301)	+	(GCCCCCA)n	Simple_repeat	1	36	(0)	48600
720	17.0	11.3	1.8	chr1	26200279	26200446	(222755976)	+	MIR	SINE/MIR	72	257	(5)	48794
192	30.4	2.5	2.5	chr1	26201080	26201160	(222755262)	C	MIR3	SINE/MIR	(20)	188	108	48795
13	21.3	8.6	3.4	chr1	26280474	26280495	(222675927)	+	(CTGACC)n	Simple_repeat	1	34	(54)	48974
16	8.2	0.0	0.0	chr1	26280496	26280521	(222675901)	+	(CCTCC)n	Simple_repeat	1	26	(0)	48975
16	13.2	0.0	0.0	chr1	26306820	26306844	(222649578)	+	(G)n	Simple_repeat	1	25	(0)	49024
228	33.8	3.8	6.2	chr1	26306921	26307081	(222649341)	+	MIRb	SINE/MIR	52	208	(60)	49025
358	32.0	1.6	0.8	chr1	26317630	26317752	(222638670)	C	MIRb	SINE/MIR	(141)	127	4	49055
234	35.3	9.9	3.8	chr1	26321367	26321631	(222634791)	+	L2c	LINE/L2	3063	3345	(42)	49060
11	23.8	6.1	0.0	chr1	26410210	26410258	(222546164)	+	G-rich	Low_complexity	1	52	(0)	49287
46	0.0	0.0	0.0	chr1	26410378	26410416	(222546006)	+	(GT)n	Simple_repeat	1	39	(0)	49288
12	12.6	0.0	3.6	chr1	26695918	26695945	(222260477)	+	(CCGC)n	Simple_repeat	1	28	(0)	50001
35	1.7	6.2	4.3	chr1	26695951	26696015	(222260407)	+	(CCCT)n	Simple_repeat	1	69	(0)	50002
15	25.3	0.0	0.0	chr1	26779217	26779258	(222177164)	+	GA-rich	Low_complexity	1	42	(0)	50156
219	30.0	1.2	3.6	chr1	26787534	26787616	(222168806)	C	L2b	LINE/L2	(19)	3356	3276	50166
19	8.2	0.0	0.0	chr1	26993578	26993603	(221962819)	+	(G)n	Simple_repeat	1	26	(0)	50663
14	18.4	2.7	0.0	chr1	27392530	27392566	(221563856)	+	(GCCGC)n	Simple_repeat	1	38	(0)	51639
1477	6.6	0.0	1.1	chr1	27526372	27526553	(221429869)	C	AluSc8	SINE/Alu	(131)	180	1	51965
30	3.1	0.0	0.0	chr1	27527865	27527897	(221428525)	+	(GCCCTC)n	Simple_repeat	1	33	(0)	51967
14	10.3	0.0	8.1	chr1	27570873	27570909	(221385513)	+	(GCCCCT)n	Simple_repeat	1	37	(0)	52045
13	0.0	0.0	0.0	chr1	27575174	27575190	(221381232)	+	(CCG)n	Simple_repeat	1	17	(0)	52049
31	0.0	0.0	0.0	chr1	27599180	27599208	(221357214)	+	(CAGGGC)n	Simple_repeat	1	29	(0)	52095
273	39.4	2.9	2.4	chr1	27599521	27599689	(221356733)	+	MIR3	SINE/MIR	36	205	(3)	52096
15	12.8	8.8	0.0	chr1	27599892	27599925	(221356497)	+	(TC)n	Simple_repeat	1	37	(0)	52097
17	4.9	0.0	0.0	chr1	27600463	27600483	(221355939)	+	(A)n	Simple_repeat	1	21	(0)	52098
22	21.2	0.0	0.0	chr1	27603144	27603195	(221353227)	+	(C)n	Simple_repeat	1	52	(0)	52101
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
1029	16.2	6.6	0.0	chr1	28115180	28115407	(220841015)	+	L1M4	LINE/L1	3830	4073	(2073)	53279
673	12.0	16.1	7.2	chr1	28115416	28115549	(220840873)	+	L1MB7	LINE/L1	5966	6107	(77)	53280
1829	13.5	0.3	6.8	chr1	28172988	28173298	(220783124)	+	AluJr	SINE/Alu	1	291	(21)	53442
16	25.2	0.0	0.0	chr1	28173299	28173323	(220783099)	+	GA-rich	Low_complexity	1	25	(0)	53443
1683	14.3	0.3	13.4	chr1	28173324	28173666	(220782756)	+	AluJb	SINE/Alu	1	298	(14)	53444
13	22.6	2.4	0.0	chr1	28260673	28260713	(220695709)	+	(CCTCC)n	Simple_repeat	1	42	(0)	53686
280	24.8	11.0	5.7	chr1	28260824	28260981	(220695441)	C	MIR	SINE/MIR	(1)	267	100	53687
350	26.2	8.8	6.4	chr1	28329781	28329890	(220626532)	+	MIR3	SINE/MIR	35	147	(61)	53913
2346	8.4	0.0	1.6	chr1	28329988	28330296	(220626126)	+	AluSq2	SINE/Alu	1	304	(9)	53914
259	23.9	1.1	12.4	chr1	28330304	28330408	(220626014)	C	MIR3	SINE/MIR	(62)	146	54	53915
220	23.8	16.0	7.9	chr1	28330402	28330515	(220625907)	+	L2b	LINE/L2	3280	3426	(0)	53906
2312	9.4	0.3	0.7	chr1	28378220	28378518	(220577904)	+	AluSx1	SINE/Alu	1	298	(14)	54064
16	24.0	0.0	0.0	chr1	28378519	28378559	(220577863)	+	(TTTT)n	Simple_repeat	1	41	(0)	54065
188	30.2	17.2	0.0	chr1	28582326	28582421	(220374001)	C	MIRb	SINE/MIR	(28)	240	125	54589
1041	13.8	0.0	0.0	chr1	28582607	28582751	(220373671)	C	AluJb	SINE/Alu	(20)	292	148	54590
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
40	17.9	2.9	3.7	chr1	28668844	28668954	(220287468)	+	G-rich	Low_complexity	1	110	(0)	54845
1568	8.5	0.0	1.5	chr1	28884201	28884400	(220072022)	+	AluSx3	SINE/Alu	105	301	(10)	55400
205	23.5	9.6	0.0	chr1	28884404	28884507	(220071915)	+	MIRc	SINE/MIR	87	210	(58)	55401
1715	15.5	0.7	2.4	chr1	28935149	28935438	(220020984)	+	AluSz6	SINE/Alu	1	285	(27)	55549
35	0.0	0.0	0.0	chr1	28935439	28935468	(220020954)	+	(AC)n	Simple_repeat	1	30	(0)	55550
6205	22.6	7.3	8.7	chr1	28935469	28935638	(220020784)	C	L1MC3	LINE/L1	(1070)	6715	6547	55546
2346	9.5	0.0	0.0	chr1	28935639	28935934	(220020488)	+	AluSc5	SINE/Alu	1	296	(13)	55551
12	20.4	2.4	2.4	chr1	29124363	29124403	(219832019)	+	(CGCCAGA)n	Simple_repeat	1	42	(0)	55967
431	29.4	9.2	4.5	chr1	30129565	30129874	(218826548)	+	MER115	DNA/hAT-Tip100	1	326	(367)	57905
12	23.8	2.2	2.1	chr1	30134567	30134612	(218821810)	+	(GCCCCT)n	Simple_repeat	1	47	(0)	57912
738	28.4	8.8	2.9	chr1	30158803	30159787	(218796635)	+	L1M6	LINE/L1	4655	5714	(691)	57940
182	21.3	0.0	4.1	chr1	30477047	30477095	(218479327)	+	MIR3	SINE/MIR	133	179	(29)	58475
126	17.5	0.0	0.0	chr1	30477381	30477611	(218478811)	+	(TGTGTG)n	Simple_repeat	1	231	(0)	58476
695	25.5	6.3	3.7	chr1	30886792	30887007	(218069415)	C	MIRb	SINE/MIR	(43)	225	4	59305
278	31.2	8.1	0.0	chr1	30887315	30887439	(218068983)	+	MIRb	SINE/MIR	40	175	(93)	59306
319	27.3	6.6	0.0	chr1	30887649	30887776	(218068646)	+	L2b	LINE/L2	3235	3371	(4)	59302
248	25.9	0.8	0.2	chr1	30894121	30894745	(218061677)	+	(GT)n	Simple_repeat	1	630	(0)	59320
18	27.4	3.6	2.3	chr1	30952654	30952672	(218003750)	+	GA-rich	Low_complexity	1	32	(54)	59461
15	15.9	2.9	0.0	chr1	30952673	30952707	(218003715)	+	G-rich	Low_complexity	1	36	(0)	59462
18	27.4	3.6	2.3	chr1	30952708	30952736	(218003686)	+	GA-rich	Low_complexity	33	86	(0)	59461
1071	5.9	0.0	0.0	chr1	30952860	30952978	(218003444)	+	AluYc	SINE/Alu	154	272	(27)	59463
36	0.0	4.4	2.1	chr1	30952979	30953023	(218003399)	+	(AAAAC)n	Simple_repeat	1	47	(0)	59464
16	0.0	0.0	0.0	chr1	31064764	31064780	(217891642)	+	(G)n	Simple_repeat	1	17	(0)	59679
1110	12.0	5.2	4.3	chr1	31084168	31084376	(217872046)	C	Tigger7	DNA/TcMar-Tigger	(2)	2489	2279	59743
971	14.2	15.6	0.5	chr1	31084368	31084573	(217871849)	+	MER49	LTR/ERV1	6	248	(675)	59744
989	10.6	0.8	0.0	chr1	31084580	31084711	(217871711)	+	AluSx	SINE/Alu	1	133	(179)	59745
3408	17.3	2.0	6.4	chr1	31084718	31084804	(217871618)	+	MER49	LTR/ERV1	244	326	(597)	59744
2290	12.5	0.3	0.0	chr1	31084805	31085115	(217871307)	C	AluSx	SINE/Alu	(0)	312	1	59746
194	31.4	6.9	3.4	chr1	31154264	31154445	(217801977)	C	L2a	LINE/L2	(132)	3255	3070	59974
471	31.9	4.3	2.7	chr1	31154503	31154686	(217801736)	C	MIRb	SINE/MIR	(18)	250	64	59975
51	30.6	2.7	3.0	chr1	31154953	31155209	(217801213)	+	G-rich	Low_complexity	1	264	(0)	59976
719	28.9	4.3	0.6	chr1	31768968	31769188	(217187234)	+	MIRb	SINE/MIR	9	251	(17)	61281
207	24.5	0.0	1.9	chr1	31769253	31769306	(217187116)	C	L2c	LINE/L2	(38)	3349	3297	61282
243	20.9	7.4	0.0	chr1	31788876	31788957	(217167465)	C	MIRc	SINE/MIR	(54)	176	83	61315
29	7.9	0.0	0.0	chr1	31938062	31938102	(217018320)	+	(CGG)n	Simple_repeat	1	41	(0)	61649
13	20.9	4.3	2.1	chr1	31938121	31938144	(217018278)	+	(CGGCG)n	Simple_repeat	1	46	(0)	61650
16	0.0	0.0	0.0	chr1	31938145	31938164	(217018258)	+	(CGG)n	Simple_repeat	1	20	(0)	61651
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
221	25.5	10.1	1.0	chr1	31940271	31940369	(217016053)	+	L2c	LINE/L2	3198	3306	(81)	61657
11	18.7	4.3	4.2	chr1	31940464	31940509	(217015913)	+	(AATAAG)n	Simple_repeat	1	48	(0)	61658
2462	7.1	0.0	0.0	chr1	31940547	31940840	(217015582)	C	AluYh3	SINE/Alu	(17)	294	1	61659
260	27.7	2.1	5.0	chr1	32248100	32248198	(216708224)	C	MER5B	DNA/hAT-Charlie	(49)	129	34	62399
14	19.1	0.0	2.6	chr1	32248485	32248522	(216707900)	+	(GAGCCG)n	Simple_repeat	1	38	(0)	62400
225	28.2	1.0	1.0	chr1	32272759	32273434	(216682988)	+	(TG)n	Simple_repeat	1	683	(0)	62488
14	15.3	0.0	0.0	chr1	32335758	32335786	(216620636)	+	(CCCCT)n	Simple_repeat	1	29	(0)	62646
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
34002	7.4	6.1	4.9	chr1	32447430	32448197	(216508225)	C	HERVIP10FH-int	LTR/ERV1	(3988)	1114	214	62853
14	16.3	8.0	1.9	chr1	32742147	32742196	(216214226)	+	(AAGGCC)n	Simple_repeat	1	54	(0)	63631
17	26.6	2.6	3.8	chr1	32754386	32754462	(216201960)	+	(ACAC)n	Simple_repeat	1	79	(0)	63658
16	35.1	0.0	1.5	chr1	32754532	32754597	(216201825)	+	(AC)n	Simple_repeat	1	66	(0)	63659
396	26.8	8.9	2.7	chr1	32816357	32816544	(216139878)	C	L2a	LINE/L2	(146)	3280	3080	63802
279	27.6	12.8	1.5	chr1	32816718	32816919	(216139503)	+	L2c	LINE/L2	3107	3344	(31)	63793
24	9.7	0.0	6.0	chr1	33257392	33257441	(215698981)	+	(TTTC)n	Simple_repeat	1	50	(0)	64797
12	25.7	0.0	0.0	chr1	33257557	33257593	(215698829)	+	G-rich	Low_complexity	1	37	(0)	64798
13	14.1	4.7	4.4	chr1	34985166	34985208	(213971214)	+	(CCGCT)n	Simple_repeat	1	45	(0)	67785
1909	12.8	0.7	0.0	chr1	35189981	35190245	(213766177)	+	AluSx	SINE/Alu	2	268	(44)	68201
15	9.1	0.0	0.0	chr1	35557306	35557329	(213399093)	+	(GGA)n	Simple_repeat	1	24	(0)	68976
261	31.7	3.6	7.5	chr1	35559827	35560000	(213396422)	+	L3b	LINE/CR1	4982	5148	(84)	68979
207	33.1	12.0	5.1	chr1	35560042	35560219	(213396203)	+	L3b	LINE/CR1	5012	5203	(29)	68980
846	23.5	7.3	7.3	chr1	35768884	35769241	(213187181)	C	MER96B	DNA/hAT-Tip100	(57)	360	3	69414
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
270	27.2	0.4	0.6	chr1	36126466	36127190	(212829232)	+	(GT)n	Simple_repeat	1	728	(0)	70184
1074	24.7	4.0	0.4	chr1	36160453	36160692	(212795730)	C	MIR	SINE/MIR	(13)	249	1	70256
767	22.2	4.8	0.0	chr1	36161431	36161610	(212794812)	+	MIRb	SINE/MIR	44	232	(36)	70257
15	17.7	5.5	3.5	chr1	36162109	36162163	(212794259)	+	(CTCTGC)n	Simple_repeat	1	58	(0)	70259
520	28.5	10.2	1.7	chr1	36162457	36162647	(212793775)	+	MIRb	SINE/MIR	1	218	(50)	70260
1699	22.2	7.4	4.5	chr1	36368548	36368948	(212587474)	+	L1MC4	LINE/L1	7451	7883	(159)	70712
16	8.2	0.0	0.0	chr1	37808747	37808772	(211147650)	+	(TGGGG)n	Simple_repeat	1	26	(0)	73489
16	18.1	0.0	8.5	chr1	38005703	38005761	(210950661)	+	(CCCCT)n	Simple_repeat	1	59	(0)	73899
296	24.5	14.8	2.7	chr1	38681094	38681239	(210275183)	+	MIR3	SINE/MIR	15	178	(30)	75139
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
552	15.4	6.5	5.7	chr1	38997539	38997661	(209958761)	C	FLAM_C	SINE/Alu	(18)	125	2	75819
15	14.4	0.0	0.0	chr1	39106785	39106808	(209849614)	+	(C)n	Simple_repeat	1	24	(0)	76102
20	9.1	0.0	2.7	chr1	39197207	39197259	(209759163)	+	(AATATA)n	Simple_repeat	1	51	(0)	76285
15	0.0	0.0	0.0	chr1	39197245	39197261	(209759161)	+	(AC)n	Simple_repeat	1	17	(0)	76286
243	18.6	1.8	0.7	chr1	39789650	39789716	(209166706)	C	L2a	LINE/L2	(282)	3093	3028	77404
480	29.0	3.4	1.3	chr1	39789733	39789930	(209166492)	C	MIR	SINE/MIR	(0)	268	60	77405
85	0.0	0.0	0.0	chr1	40200868	40200939	(208755483)	+	(AC)n	Simple_repeat	1	72	(0)	78331
28	11.3	4.2	0.0	chr1	40201023	40201086	(208755336)	+	(AC)n	Simple_repeat	1	66	(0)	78332
596	15.8	5.8	0.0	chr1	40201090	40201203	(208755219)	+	MER5A1	DNA/hAT-Charlie	46	166	(0)	78333
2686	4.6	0.0	0.3	chr1	40201344	40201647	(208754775)	+	AluY	SINE/Alu	1	303	(8)	78334
2106	14.9	0.3	5.2	chr1	40377838	40378122	(208578300)	C	MER2	DNA/TcMar-Tigger	(0)	345	75	78700
1092	15.2	0.6	0.0	chr1	40378123	40378287	(208578135)	C	FRAM	SINE/Alu	(10)	166	1	78701
300	29.3	4.3	4.8	chr1	40531160	40531324	(208425098)	+	L2-3_Crp	LINE/L2	844	1007	(1089)	79002
470	25.6	1.5	0.0	chr1	40653770	40653898	(208302524)	C	MER94	DNA/hAT-Blackjack	(3)	131	1	79244
38	14.9	1.3	1.3	chr1	40654105	40654181	(208302241)	+	(CTCCC)n	Simple_repeat	1	77	(0)	79245
443	29.1	13.4	1.7	chr1	40711861	40712091	(208244331)	+	MIRc	SINE/MIR	2	263	(5)	79375
637	17.0	0.0	0.0	chr1	40864036	40864129	(208092293)	C	AluJr	SINE/Alu	(218)	94	1	79664
17	13.3	7.8	1.8	chr1	40980273	40980323	(207976099)	+	G-rich	Low_complexity	1	55	(0)	79991
251	33.1	3.6	4.6	chr1	40980446	40980641	(207975781)	C	MIRc	SINE/MIR	(22)	246	53	79992
488	25.5	16.6	0.1	chr1	41515660	41515849	(207440573)	+	MIR	SINE/MIR	27	248	(14)	80955
390	28.2	3.7	5.2	chr1	41516381	41516571	(207439851)	+	L2a	LINE/L2	2485	2672	(747)	80956
13	17.4	5.3	5.0	chr1	42334856	42334912	(206621510)	+	(AGGCCCC)n	Simple_repeat	1	60	(0)	82309
19	20.2	0.0	2.1	chr1	42682589	42682635	(206273787)	+	(GCC)n	Simple_repeat	1	47	(0)	82975
363	23.3	1.1	5.3	chr1	42765753	42765847	(206190575)	+	MIR	SINE/MIR	136	226	(36)	83108
20	15.8	0.0	0.0	chr1	42765863	42765899	(206190523)	+	(ATC)n	Simple_repeat	1	37	(0)	83110
197	25.8	4.6	0.0	chr1	42767696	42767757	(206188665)	C	MIRc	SINE/MIR	(76)	192	128	83111
401	25.7	1.9	0.0	chr1	42767861	42767961	(206188461)	C	MIRc	SINE/MIR	(38)	230	128	83112
443	29.7	11.9	3.7	chr1	42923231	42923608	(206032814)	C	L2	LINE/L2	(337)	3082	2670	83366
11	20.7	0.0	2.9	chr1	42923895	42923929	(206032493)	+	(CCCCGA)n	Simple_repeat	1	35	(0)	83367
32	0.0	2.6	2.6	chr1	42924886	42924923	(206031499)	+	(CCCAC)n	Simple_repeat	1	39	(0)	83368
11	24.3	0.0	0.0	chr1	42925014	42925047	(206031375)	+	(CCCGCA)n	Simple_repeat	1	34	(0)	83369
289	30.8	10.1	2.7	chr1	42925405	42925514	(206030908)	C	L2a	LINE/L2	(16)	3410	3292	83370
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
440	25.0	1.9	0.0	chr1	42959265	42959368	(205997054)	+	MIR	SINE/MIR	132	237	(25)	83431
224	31.6	3.0	6.7	chr1	42959491	42959595	(205996827)	+	L2c	LINE/L2	3085	3185	(202)	83432
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
17	24.9	3.5	0.0	chr1	44030752	44030808	(204925614)	+	(GGCA)n	Simple_repeat	1	59	(0)	85305
38	2.8	0.0	0.0	chr1	44031167	44031203	(204925219)	+	(CA)n	Simple_repeat	1	37	(0)	85306
13	13.2	6.1	0.0	chr1	44031405	44031437	(204924985)	+	(GCCGC)n	Simple_repeat	1	35	(0)	85307
20	13.2	1.8	6.9	chr1	44632402	44632458	(204323964)	+	(CCCT)n	Simple_repeat	1	58	(0)	86404
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
731	16.3	0.0	2.8	chr1	44730545	44730685	(204225737)	+	AluJr	SINE/Alu	175	311	(1)	86587
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
11	21.1	8.2	0.0	chr1	45015028	45015076	(203941346)	+	(TGTGTC)n	Simple_repeat	1	53	(0)	87197
272	30.4	8.2	5.2	chr1	45015079	45015231	(203941191)	+	L2a	LINE/L2	3269	3426	(0)	87198
2098	12.3	0.3	0.3	chr1	45303176	45303468	(203652954)	C	AluJb	SINE/Alu	(19)	293	1	87709
13	21.9	0.0	2.6	chr1	45303630	45303668	(203652754)	+	(GGAGCC)n	Simple_repeat	1	39	(0)	87710
1079	19.4	9.8	16.5	chr1	45522401	45522751	(203433671)	+	LTR34	LTR/ERV1	1	291	(408)	88199
406	29.9	16.2	2.4	chr1	45551237	45551450	(203404972)	+	MIRb	SINE/MIR	13	256	(6)	88279
220	17.4	4.2	0.0	chr1	45687561	45687606	(203268816)	C	MIR3	SINE/MIR	(80)	128	81	88537
2473	7.6	0.0	1.3	chr1	46202411	46202724	(202753698)	+	AluSz	SINE/Alu	1	310	(2)	89542
947	14.1	0.0	14.2	chr1	46202725	46202822	(202753600)	+	MER5A1	DNA/hAT-Charlie	76	163	(3)	89541
44	0.0	0.0	0.0	chr1	46202921	46202958	(202753464)	+	(GT)n	Simple_repeat	1	38	(0)	89543
228	26.7	3.2	0.0	chr1	46203085	46203144	(202753278)	C	L2c	LINE/L2	(5)	3370	3309	89544
13	27.9	0.0	0.0	chr1	46472335	46472377	(202484045)	+	(CCCC)n	Simple_repeat	1	43	(0)	90113
230	31.8	3.4	0.0	chr1	46472491	46472575	(202483847)	C	L2c	LINE/L2	(53)	3334	3247	90114
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
2279	8.3	0.0	0.3	chr1	47174048	47174348	(201782074)	+	AluSg	SINE/Alu	1	300	(10)	91034
265	28.7	1.4	12.8	chr1	47174485	47174640	(201781782)	+	L1M5	LINE/L1	5531	5668	(456)	91035
14	20.1	0.0	0.0	chr1	47231965	47231998	(201724424)	+	G-rich	Low_complexity	1	34	(0)	91127
16	16.3	0.0	2.8	chr1	47438097	47438132	(201518290)	+	(GCG)n	Simple_repeat	1	36	(0)	91599
2177	13.2	0.0	0.0	chr1	50712375	50712669	(198243753)	+	AluSz6	SINE/Alu	2	296	(16)	97314
1976	14.2	2.0	0.0	chr1	50712884	50713178	(198243244)	+	AluJb	SINE/Alu	5	305	(7)	97315
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
388	29.8	13.1	0.0	chr1	51293438	51293642	(197662780)	C	MIRc	SINE/MIR	(16)	252	17	98381
823	24.9	4.0	5.2	chr1	51293742	51293991	(197662431)	+	MIR	SINE/MIR	15	261	(1)	98382
11	22.2	0.0	4.9	chr1	51729791	51729831	(197226591)	+	G-rich	Low_complexity	1	41	(0)	99340
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
1747	28.0	9.3	5.1	chr1	52725976	52726273	(196230149)	C	L2	LINE/L2	(2441)	978	634	101571
2313	11.7	0.7	0.0	chr1	54254822	54255130	(194701292)	C	AluSz	SINE/Alu	(1)	311	1	104745
16	9.8	0.0	0.0	chr1	54255151	54255172	(194701250)	+	(G)n	Simple_repeat	1	22	(0)	104746
12	28.0	0.0	0.0	chr1	54255173	54255189	(194701233)	+	G-rich	Low_complexity	1	39	(0)	104747
181	24.8	22.7	0.0	chr1	54255481	54255589	(194700833)	C	MIR3	SINE/MIR	(66)	142	2	104748
186	32.4	9.9	6.2	chr1	54395271	54395415	(194561007)	C	MIR3	SINE/MIR	(56)	152	2	104984
352	32.4	2.7	2.7	chr1	54395624	54395772	(194560650)	C	MIRb	SINE/MIR	(64)	204	56	104985
2396	8.1	0.0	0.0	chr1	54395911	54396219	(194560203)	+	AluSx3	SINE/Alu	1	309	(2)	104986
261	32.7	7.0	3.3	chr1	54402142	54402309	(194554113)	C	MIRb	SINE/MIR	(0)	268	83	104994
14	18.2	0.0	4.9	chr1	54402495	54402535	(194553887)	+	(CCCCCA)n	Simple_repeat	1	41	(0)	104995
22	16.5	3.6	1.7	chr1	54406918	54406973	(194549449)	+	(CCGACC)n	Simple_repeat	1	58	(0)	105001
30	0.0	0.0	0.0	chr1	54407750	54407777	(194548645)	+	(T)n	Simple_repeat	1	28	(0)	105002
209	31.8	4.3	1.6	chr1	54408583	54408723	(194547699)	+	MIRc	SINE/MIR	66	207	(1)	105003
311	27.8	2.2	0.0	chr1	54463249	54463338	(194493084)	C	MIR3	SINE/MIR	(61)	147	56	105136
203	28.3	2.6	8.9	chr1	54463373	54463496	(194492926)	+	MIR3	SINE/MIR	21	136	(72)	105137
15	6.8	2.9	5.6	chr1	54463719	54463753	(194492669)	+	G-rich	Low_complexity	1	36	(0)	105138
36	20.2	2.5	0.0	chr1	54476197	54476275	(194480147)	+	(CA)n	Simple_repeat	1	81	(0)	105165
21	3.7	3.6	0.0	chr1	54476321	54476348	(194480074)	+	(CA)n	Simple_repeat	1	29	(0)	105165
20	26.2	3.7	2.4	chr1	54476356	54476399	(194480023)	+	(CT)n	Simple_repeat	1	44	(0)	105166
32	5.3	2.5	0.0	chr1	54476400	54476439	(194479983)	+	(CA)n	Simple_repeat	1	41	(0)	105167
20	26.2	3.7	2.4	chr1	54476440	54476476	(194479946)	+	(CT)n	Simple_repeat	1	38	(0)	105168
15	14.4	0.0	0.0	chr1	54476526	54476549	(194479873)	+	(TC)n	Simple_repeat	1	24	(0)	105169
16	0.0	0.0	0.0	chr1	54489318	54489334	(194467088)	+	(A)n	Simple_repeat	1	17	(0)	105196
13	19.2	2.8	0.0	chr1	54489335	54489352	(194467070)	+	A-rich	Low_complexity	2	37	(0)	105197
308	24.7	5.9	0.0	chr1	54574506	54574597	(194381825)	C	MIRb	SINE/MIR	(36)	232	125	105407
248	33.6	11.5	1.4	chr1	54574883	54575030	(194381392)	C	MIRc	SINE/MIR	(13)	255	91	105408
196	31.6	16.3	8.2	chr1	55206183	55206485	(193749937)	C	L2c	LINE/L2	(33)	3354	3023	106626
16	13.1	0.0	0.0	chr1	55206649	55206673	(193749749)	+	(A)n	Simple_repeat	1	25	(0)	106627
1613	17.8	4.4	2.7	chr1	55206881	55207173	(193749249)	+	AluJb	SINE/Alu	1	298	(14)	106628
17	21.6	1.7	4.9	chr1	58785069	58785131	(190171291)	+	(ACACGC)n	Simple_repeat	1	60	(0)	113507
351	31.6	3.9	2.3	chr1	58814820	58814994	(190141428)	+	MIRb	SINE/MIR	45	222	(46)	113579
244	32.9	2.8	4.8	chr1	58896346	58896492	(190059930)	C	MIR3	SINE/MIR	(59)	149	6	113762
16	4.5	0.0	0.0	chr1	58896794	58896816	(190059606)	+	(GGGA)n	Simple_repeat	1	23	(0)	113763
14	21.3	0.0	0.0	chr1	61050923	61050955	(187905467)	+	GA-rich	Low_complexity	1	33	(0)	117592
41	24.9	2.5	0.0	chr1	61082191	61082308	(187874114)	+	(GAGC)n	Simple_repeat	1	121	(0)	117647
16	18.9	0.0	0.0	chr1	61082351	61082380	(187874042)	+	(C)n	Simple_repeat	1	30	(0)	117648
22	19.3	6.8	4.5	chr1	61082380	61082482	(187873940)	+	(CGCGG)n	Simple_repeat	1	110	(0)	117649
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
20	24.2	0.0	5.3	chr1	61082849	61082923	(187873499)	+	G-rich	Low_complexity	1	75	(0)	117652
22	22.4	0.0	0.0	chr1	61082925	61082980	(187873442)	+	(GT)n	Simple_repeat	1	56	(0)	117653
35	16.7	0.0	0.0	chr1	61184116	61184176	(187772246)	+	A-rich	Low_complexity	1	61	(0)	117786
20	16.7	0.0	0.0	chr1	61204472	61204505	(187751917)	+	(T)n	Simple_repeat	1	34	(0)	117812
184	33.3	0.0	0.0	chr1	61724614	61724658	(187231764)	+	L2b	LINE/L2	3294	3338	(37)	118694
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
18	0.0	0.0	0.0	chr1	65067782	65067801	(183888621)	+	(A)n	Simple_repeat	1	20	(0)	125017
20	16.0	0.0	0.0	chr1	65067870	65067904	(183888518)	+	(TG)n	Simple_repeat	1	35	(0)	125018
12	22.0	2.7	0.0	chr1	65148891	65148927	(183807495)	+	(CCGTACC)n	Simple_repeat	1	38	(0)	125213
478	27.6	13.8	3.1	chr1	65189936	65190226	(183766196)	+	L4_A_Mam	LINE/RTE-X	4592	4918	(72)	125303
805	19.7	1.1	5.7	chr1	65190241	65190433	(183765989)	C	AluJr	SINE/Alu	(0)	312	129	125304
28	13.7	0.0	4.8	chr1	65310202	65310263	(183646159)	+	G-rich	Low_complexity	1	62	(0)	125554
293	33.1	3.0	10.4	chr1	65525008	65525189	(183431233)	C	L3	LINE/CR1	(6)	4093	3926	125936
15	0.0	0.0	0.0	chr1	74729957	74729973	(174226449)	+	(CT)n	Simple_repeat	1	17	(0)	139076
18	33.5	0.0	0.0	chr1	74732595	74732668	(174223754)	+	G-rich	Low_complexity	1	74	(0)	139078
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
18	7.7	0.0	0.0	chr1	77888599	77888626	(171067796)	+	(CGG)n	Simple_repeat	1	28	(0)	143695
2245	26.5	9.2	3.8	chr1	84102414	84103154	(164853268)	+	MLT1G-int	LTR/ERVL-MaLR	657	1459	(30)	152069
558	26.4	11.6	1.5	chr1	84103160	84103405	(164853017)	+	MLT1G	LTR/ERVL-MaLR	1	284	(307)	152069
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
14	9.9	2.8	5.4	chr1	87328906	87328941	(161627481)	+	(CGCCG)n	Simple_repeat	1	37	(0)	156909
18	12.2	0.0	0.0	chr1	87331057	87331083	(161625339)	+	(C)n	Simple_repeat	1	27	(0)	156911
16	16.9	8.3	3.9	chr1	87331365	87331436	(161624986)	+	(CTCCCGT)n	Simple_repeat	1	78	(0)	156912
15	15.5	0.0	5.0	chr1	87331556	87331595	(161624827)	+	G-rich	Low_complexity	1	40	(0)	156913
14	18.9	0.0	2.6	chr1	87335560	87335597	(161620825)	+	G-rich	Low_complexity	1	38	(0)	156916
1576	21.8	1.0	1.9	chr1	88735155	88735461	(160220961)	C	AluJr	SINE/Alu	(8)	304	1	158896
4156	25.4	5.7	5.2	chr1	88735462	88736365	(160220057)	C	L1M1	LINE/L1	(4581)	2984	2101	158895
15	24.4	0.0	0.0	chr1	88891121	88891159	(160065263)	+	G-rich	Low_complexity	1	39	(0)	159173
2465	8.3	0.0	0.3	chr1	89878684	89878985	(159077437)	+	AluSq	SINE/Alu	1	301	(12)	160479
267	35.2	0.0	0.0	chr1	89879329	89879416	(159077006)	+	L3	LINE/CR1	3837	3924	(175)	160480
692	22.6	4.2	4.2	chr1	89940918	89941083	(159015339)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	160580
448	26.5	3.3	0.0	chr1	91885013	91885129	(157071293)	C	MIR	SINE/MIR	(22)	240	120	163407
13	11.1	9.3	5.1	chr1	91885645	91885698	(157070724)	+	(CTGCCCCG)n	Simple_repeat	1	59	(0)	163408
274	33.9	12.1	10.7	chr1	93178337	93178646	(155777776)	+	L2b	LINE/L2	3045	3359	(16)	165851
248	29.9	14.4	1.3	chr1	93178662	93178739	(155777683)	+	MIR3	SINE/MIR	32	121	(87)	165852
29	0.0	0.0	0.0	chr1	93847897	93847923	(155108499)	+	(GCG)n	Simple_repeat	1	27	(0)	166926
305	28.0	3.3	2.5	chr1	93848110	93848230	(155108192)	C	MER5A	DNA/hAT-Charlie	(16)	173	52	166927
272	17.4	19.6	2.5	chr1	100034436	100034553	(148921869)	C	L1MC4	LINE/L1	(5326)	889	747	175842
317	28.9	0.0	0.0	chr1	100034646	100034721	(148921701)	C	L1MC4	LINE/L1	(5499)	716	641	175842
304	25.6	2.9	12.5	chr1	100034875	100035026	(148921396)	+	MLT1N2	LTR/ERVL-MaLR	422	558	(4)	175843
730	28.0	10.1	3.3	chr1	108533632	108534089	(140422333)	C	LTR78	LTR/ERV1	(42)	1262	770	186882
1830	4.2	1.4	0.9	chr1	108534095	108534333	(140422089)	C	AluY	SINE/Alu	(0)	311	67	186883
192	22.2	0.0	4.3	chr1	108534739	108534785	(140421637)	+	MIRc	SINE/MIR	149	193	(75)	186884
483	32.7	13.5	2.3	chr1	108535114	108535475	(140420947)	+	L2b	LINE/L2	2872	3270	(117)	186880
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
2169	9.9	0.0	0.3	chr1	109241040	109241322	(139715100)	+	AluSx	SINE/Alu	22	303	(9)	188289
2518	7.0	0.0	0.6	chr1	109494555	109494868	(139461554)	+	AluSz	SINE/Alu	1	312	(0)	188672
13	27.3	1.4	5.7	chr1	109630568	109630636	(139325786)	+	GA-rich	Low_complexity	1	70	(0)	188869
2645	3.6	1.0	0.0	chr1	109644293	109644597	(139311825)	C	AluY	SINE/Alu	(3)	308	1	188893
47	0.0	0.0	0.0	chr1	109656551	109656590	(139299832)	+	(TG)n	Simple_repeat	1	40	(0)	188913
4918	10.9	0.0	4.2	chr1	109669640	109670357	(139286065)	C	LTR12_	LTR/ERV1	(0)	688	1	188933
535	29.8	11.9	0.1	chr1	109823141	109823375	(139133047)	+	MIRc	SINE/MIR	2	263	(5)	189141
16	27.0	0.0	5.8	chr1	110034688	110034756	(138921666)	+	(GCC)n	Simple_repeat	1	69	(0)	189456
12	4.7	4.5	0.0	chr1	111619749	111619770	(137336652)	+	(GCGT)n	Simple_repeat	1	23	(0)	191803
22	24.0	0.0	0.0	chr1	111619785	111619838	(137336584)	+	(CGC)n	Simple_repeat	1	54	(0)	191804
43	2.3	0.0	0.0	chr1	111619876	111619919	(137336503)	+	(GGAGGAGGT)n	Simple_repeat	1	44	(0)	191805
2301	8.6	0.7	0.7	chr1	111715086	111715377	(137241045)	C	AluSg7	SINE/Alu	(17)	292	1	191961
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
320	26.3	7.7	0.7	chr1	112956706	112956908	(135999514)	+	MIR	SINE/MIR	17	237	(31)	194127
369	28.0	10.7	1.1	chr1	112957084	112957260	(135999162)	C	MIRb	SINE/MIR	(41)	227	32	194128
250	29.1	2.5	7.1	chr1	112957314	112957439	(135998983)	C	L2c	LINE/L2	(14)	3373	3254	194129
187	21.4	0.0	2.3	chr1	112957430	112957472	(135998950)	C	L2b	LINE/L2	(10)	3365	3324	194130
328	31.4	0.0	0.0	chr1	112957540	112957625	(135998797)	C	MIRb	SINE/MIR	(71)	197	112	194131
20	20.8	1.7	3.3	chr1	113677711	113677770	(135278652)	+	(TTCTT)n	Simple_repeat	1	61	(0)	195346
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
17	18.1	0.0	0.0	chr1	114510751	114510788	(134445634)	+	(GGAGCC)n	Simple_repeat	1	38	(0)	196724
13	23.4	6.0	0.0	chr1	114511170	114511219	(134445203)	+	(GAGC)n	Simple_repeat	1	53	(0)	196725
18	14.9	2.6	2.5	chr1	114511211	114511249	(134445173)	+	(GC)n	Simple_repeat	1	40	(0)	196726
14	5.0	0.0	0.0	chr1	114757666	114757686	(134198736)	+	(CAC)n	Simple_repeat	1	21	(0)	197230
279	24.8	9.0	0.0	chr1	116232004	116232104	(132724318)	+	MIRb	SINE/MIR	89	199	(69)	199361
2012	9.5	0.0	2.9	chr1	116419258	116419569	(132536853)	C	AluSq2	SINE/Alu	(0)	313	23	199660
573	31.7	4.1	5.5	chr1	116419570	116419714	(132536708)	C	L1ME4c	LINE/L1	(371)	459	316	199659
2456	3.2	0.7	0.0	chr1	116419805	116420109	(132536313)	C	AluY	SINE/Alu	(0)	311	2	199661
562	27.0	8.6	1.3	chr1	116492013	116492237	(132464185)	+	MER126	DNA	11	253	(196)	199783
18	0.0	0.0	0.0	chr1	116492392	116492411	(132464011)	+	(TG)n	Simple_repeat	1	20	(0)	199784
27	0.0	0.0	0.0	chr1	116492639	116492664	(132463758)	+	(T)n	Simple_repeat	1	26	(0)	199785
22	17.3	6.4	3.6	chr1	116679845	116679922	(132276500)	+	(CTCTT)n	Simple_repeat	1	83	(0)	200095
266	28.7	9.0	0.0	chr1	116907609	116907709	(132048713)	+	L2a	LINE/L2	3305	3415	(11)	200478
225	26.2	1.6	0.0	chr1	116907683	116907743	(132048679)	C	L2a	LINE/L2	(0)	3426	3365	200479
203	32.3	9.9	7.3	chr1	117572423	117572599	(131383823)	C	MamRTE1	LINE/RTE-BovB	(1270)	2542	2361	201507
1920	17.8	0.0	0.0	chr1	117572935	117573232	(131383190)	+	AluJb	SINE/Alu	1	298	(14)	201508
13	15.4	5.6	0.0	chr1	119712665	119712700	(129243722)	+	G-rich	Low_complexity	1	38	(0)	204434
1524	0.0	0.0	0.0	chr1	143729407	143729570	(105226852)	C	U1	snRNA	(1)	164	1	208249
22	12.8	0.0	0.0	chr1	143729646	143729679	(105226743)	+	(C)n	Simple_repeat	1	34	(0)	208250
2887	13.8	10.0	0.0	chr1	143866957	143867450	(105088972)	C	MER34C_	LTR/ERV1	(0)	585	37	208455
1214	14.7	12.3	2.2	chr1	143867451	143867508	(105088914)	C	L1MEc	LINE/L1	(5051)	1349	1291	208454
4896	8.6	1.4	0.8	chr1	143867509	143868138	(105088284)	C	MER41B	LTR/ERV1	(0)	634	1	208456
631	21.4	3.6	3.0	chr1	144523858	144524021	(104432401)	C	U1	snRNA	(0)	165	1	209540
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1490	0.6	0.0	0.0	chr1	144560666	144560829	(104395593)	C	U1	snRNA	(1)	164	1	209628
14	16.9	2.3	4.4	chr1	145849847	145849890	(103106532)	+	(CCTTTCC)n	Simple_repeat	1	45	(0)	211646
22	7.3	0.0	0.0	chr1	145962633	145962661	(102993761)	+	(G)n	Simple_repeat	1	29	(0)	211831
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
1169	18.3	7.2	7.8	chr1	146387818	146388125	(102568297)	+	LTR4	LTR/ERV1	291	596	(0)	212561
251	6.1	0.0	0.0	chr1	146388126	146388158	(102568264)	+	U1	snRNA	133	165	(0)	212562
115	0.0	2.8	0.0	chr1	147541071	147541178	(101415244)	+	(GA)n	Simple_repeat	1	111	(0)	214258
41	6.0	0.0	0.0	chr1	147541179	147541230	(101415192)	+	(TG)n	Simple_repeat	1	52	(0)	214259
20	16.6	6.8	3.9	chr1	147541295	147541367	(101415055)	+	GA-rich	Low_complexity	1	78	(0)	214260
26	23.2	1.4	1.4	chr1	147600187	147600258	(101356164)	+	(CGC)n	Simple_repeat	1	73	(0)	214369
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
2662	14.2	12.6	0.0	chr1	149774899	149775378	(99181044)	C	MER34C_	LTR/ERV1	(0)	585	37	217723
1177	15.4	12.6	2.2	chr1	149775379	149775436	(99180986)	C	L1MEc	LINE/L1	(5051)	1349	1291	217722
4816	9.1	1.6	0.8	chr1	149775437	149776065	(99180357)	C	MER41B	LTR/ERV1	(0)	634	1	217724
225	25.8	2.1	4.1	chr1	150269399	150269495	(98686927)	+	L3b	LINE/CR1	4968	5062	(170)	218650
272	21.7	20.9	0.0	chr1	150486658	150486763	(98469659)	C	MIRb	SINE/MIR	(28)	234	101	219184
570	11.8	0.0	19.1	chr1	150486764	150486899	(98469523)	+	AluJr	SINE/Alu	1	110	(202)	219185
373	28.9	5.3	0.3	chr1	150486942	150487050	(98469372)	C	MIRb	SINE/MIR	(148)	120	1	219184
2433	7.7	0.0	0.0	chr1	150630024	150630321	(98326101)	+	AluSx1	SINE/Alu	1	298	(14)	219492
1067	8.3	0.0	0.0	chr1	150630671	150630802	(98325620)	+	AluSx	SINE/Alu	1	132	(180)	219493
2146	9.6	0.7	2.0	chr1	150630806	150631107	(98325315)	+	AluSc	SINE/Alu	1	298	(11)	219494
16	32.0	1.4	1.4	chr1	150876559	150876629	(98079793)	+	(CGC)n	Simple_repeat	1	72	(0)	220009
18	21.6	3.7	0.0	chr1	150981936	150981989	(97974433)	+	(GAGCCA)n	Simple_repeat	1	56	(0)	220249
17	25.7	0.0	0.0	chr1	151282307	151282352	(97674070)	+	(GCG)n	Simple_repeat	1	46	(0)	220903
467	31.3	10.7	2.4	chr1	151370040	151370245	(97586177)	+	MIRb	SINE/MIR	5	229	(39)	221064
207	33.3	2.2	2.9	chr1	151370386	151370517	(97585905)	+	MIR	SINE/MIR	24	153	(55)	221065
210	21.8	0.0	6.8	chr1	151370910	151370968	(97585454)	+	MIR3	SINE/MIR	16	70	(138)	221066
49	24.3	1.2	4.1	chr1	151458581	151458747	(97497675)	+	(CCCCCG)n	Simple_repeat	1	169	(0)	221252
295	26.1	13.3	1.8	chr1	151611537	151611649	(97344773)	+	MIRc	SINE/MIR	60	187	(81)	221595
13	14.6	0.0	3.1	chr1	151716659	151716690	(97239732)	+	(CCACCC)n	Simple_repeat	1	32	(0)	221782
17	11.5	5.3	0.0	chr1	151716802	151716839	(97239583)	+	(CCTCCCC)n	Simple_repeat	1	40	(0)	221783
13	29.7	3.1	1.5	chr1	151717312	151717375	(97239047)	+	GA-rich	Low_complexity	1	66	(0)	221784
265	32.0	5.2	3.5	chr1	151862472	151862630	(97093792)	C	MIR3	SINE/MIR	(4)	204	47	222000
303	27.4	8.6	0.9	chr1	151862657	151862763	(97093659)	C	MLT1K	LTR/ERVL-MaLR	(328)	267	152	222001
498	32.0	5.1	0.5	chr1	151970436	151970642	(96985780)	C	ERVL-E-int	LTR/ERVL	(4097)	1570	1354	222198
15	14.4	0.0	0.0	chr1	152036854	152036877	(96919545)	+	(T)n	Simple_repeat	1	24	(0)	222295
13	0.0	5.0	0.0	chr1	152036883	152036902	(96919520)	+	(AAG)n	Simple_repeat	1	21	(0)	222296
14	15.7	2.6	2.6	chr1	153728032	153728069	(95228353)	+	(CCTCCGC)n	Simple_repeat	1	39	(0)	224669
12	8.4	0.0	6.9	chr1	153728480	153728508	(95227914)	+	GA-rich	Low_complexity	1	29	(0)	224670
13	13.1	0.0	0.0	chr1	153922689	153922713	(95033709)	+	(CGGG)n	Simple_repeat	1	25	(0)	225074
14	15.6	5.6	0.0	chr1	153922834	153922892	(95033530)	+	G-rich	Low_complexity	1	62	(0)	225075
40	8.3	0.0	0.0	chr1	153945554	153945605	(95010817)	+	(AC)n	Simple_repeat	1	52	(0)	225115
12	16.5	0.0	0.0	chr1	154221333	154221378	(94735044)	+	(GAGC)n	Simple_repeat	1	46	(0)	225712
18	24.8	5.6	0.0	chr1	154325451	154325521	(94630901)	+	(GCTCCCC)n	Simple_repeat	1	75	(0)	225936
14	24.9	3.9	0.0	chr1	154325494	154325545	(94630877)	+	(CCGCCG)n	Simple_repeat	1	54	(0)	225937
19	15.2	2.5	9.8	chr1	154325685	154325764	(94630658)	+	(CGAGG)n	Simple_repeat	1	82	(0)	225938
37	0.0	0.0	0.0	chr1	154558615	154558648	(94397774)	+	(CCG)n	Simple_repeat	1	34	(0)	226414
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
189	28.7	5.0	2.1	chr1	154962654	154962749	(93993673)	+	MIRc	SINE/MIR	170	268	(0)	227115
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
13	24.6	0.0	4.3	chr1	155002749	155002795	(93953627)	+	GA-rich	Low_complexity	1	47	(0)	227188
181	22.5	2.4	0.0	chr1	155003319	155003358	(93953064)	C	MER131	DNA?	(159)	56	16	227189
585	26.2	5.0	3.0	chr1	155013360	155013556	(93942866)	C	MIR3	SINE/MIR	(7)	201	1	227197
13	18.3	4.4	2.1	chr1	155013677	155013721	(93942701)	+	G-rich	Low_complexity	1	47	(0)	227198
18	9.1	2.6	5.0	chr1	155193006	155193044	(93763378)	+	(CCT)n	Simple_repeat	1	40	(0)	227523
2392	5.6	0.3	0.3	chr1	155194029	155194314	(93762108)	+	AluSg4	SINE/Alu	6	291	(19)	227524
2286	8.9	0.0	8.0	chr1	155206533	155206870	(93749552)	+	AluSq2	SINE/Alu	1	311	(2)	227539
20	22.8	1.8	0.0	chr1	155208685	155208740	(93747682)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	227541
12	21.8	2.7	0.0	chr1	155209171	155209207	(93747215)	+	G-rich	Low_complexity	1	38	(0)	227542
12	24.4	0.0	4.3	chr1	155273439	155273485	(93682937)	+	(CCGGCT)n	Simple_repeat	1	47	(0)	227647
14	27.2	1.6	3.2	chr1	155277400	155277462	(93678960)	+	(CCGC)n	Simple_repeat	1	61	(0)	227659
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
11	13.2	5.7	2.7	chr1	156054978	156055012	(92901410)	+	(CGAGCGG)n	Simple_repeat	1	37	(0)	229385
30	21.8	5.7	0.0	chr1	156082018	156082115	(92874307)	+	GA-rich	Low_complexity	1	103	(0)	229434
19	9.2	2.9	0.0	chr1	156082822	156082856	(92873566)	+	(GGGGGCC)n	Simple_repeat	1	36	(0)	229435
20	19.1	1.7	3.4	chr1	156082887	156082944	(92873478)	+	(CGCTCCC)n	Simple_repeat	1	59	(0)	229436
21	10.8	0.0	0.0	chr1	156248520	156248549	(92707873)	+	(C)n	Simple_repeat	1	30	(0)	229786
2408	6.0	1.7	1.0	chr1	156248608	156248905	(92707517)	C	AluY	SINE/Alu	(11)	300	1	229787
17	27.6	2.7	2.7	chr1	156420427	156420499	(92535923)	+	(CCG)n	Simple_repeat	1	75	(0)	230115
12	13.2	9.3	2.1	chr1	156500042	156500084	(92456338)	+	GA-rich	Low_complexity	1	47	(0)	230237
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
207	35.2	6.1	4.8	chr1	156524205	156524350	(92432072)	+	L3	LINE/CR1	3601	3748	(351)	230287
478	28.3	11.6	3.5	chr1	156524369	156524566	(92431856)	+	MIRb	SINE/MIR	45	260	(8)	230288
31	23.7	0.0	0.0	chr1	156660382	156660448	(92295974)	+	(GT)n	Simple_repeat	1	67	(0)	230532
42	0.0	0.0	0.0	chr1	156661556	156661591	(92294831)	+	(GT)n	Simple_repeat	1	36	(0)	230533
39	2.7	0.0	0.0	chr1	156677982	156678019	(92278403)	+	(AC)n	Simple_repeat	1	38	(0)	230551
248	33.7	1.0	0.0	chr1	156678277	156678371	(92278051)	C	MIR	SINE/MIR	(5)	257	162	230552
201	22.9	1.6	3.2	chr1	156678418	156678480	(92277942)	C	L2b	LINE/L2	(221)	3154	3093	230553
217	22.5	0.0	0.0	chr1	156694469	156694508	(92261914)	C	L2c	LINE/L2	(65)	3322	3283	230588
27	16.6	0.0	0.0	chr1	156747228	156747274	(92209148)	+	(C)n	Simple_repeat	1	47	(0)	230672
21	16.2	5.5	0.0	chr1	156747275	156747282	(92209140)	+	(CCCCCCCT)n	Simple_repeat	1	58	(0)	230673
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
341	23.7	25.3	0.0	chr1	160046251	160046427	(88909995)	C	MIRc	SINE/MIR	(29)	239	3	235151
13	13.3	2.7	5.3	chr1	160362775	160362811	(88593611)	+	GA-rich	Low_complexity	1	38	(0)	235632
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
12	18.0	6.1	3.9	chr1	160400905	160400953	(88555469)	+	A-rich	Low_complexity	1	52	(0)	235701
393	30.6	13.4	0.9	chr1	160665172	160665392	(88291030)	C	MIR	SINE/MIR	(6)	256	4	236093
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
342	20.0	5.8	17.7	chr1	161291704	161291778	(87664644)	+	MER20B	DNA/hAT-Charlie	6	76	(707)	237227
57	0.0	0.0	0.0	chr1	161291779	161291827	(87664595)	+	(TG)n	Simple_repeat	1	49	(0)	237228
342	20.0	5.8	17.7	chr1	161291828	161291909	(87664513)	+	MER20B	DNA/hAT-Charlie	77	143	(640)	237227
12	10.0	0.0	0.0	chr1	161612969	161612990	(87343432)	+	(TTCC)n	Simple_repeat	1	22	(0)	237811
1160	14.2	18.6	1.6	chr1	161613095	161613338	(87343084)	+	LTR25	LTR/ERV1	403	697	(147)	237812
2159	6.6	0.0	3.3	chr1	161728205	161728478	(87227944)	+	AluSq2	SINE/Alu	37	301	(12)	237997
16	16.6	0.0	0.0	chr1	162632648	162632674	(86323748)	+	(T)n	Simple_repeat	1	27	(0)	239514
16	0.0	0.0	0.0	chr1	163071856	163071873	(85884549)	+	(C)n	Simple_repeat	1	18	(0)	240206
16	0.0	0.0	0.0	chr1	164712178	164712194	(84244228)	+	(A)n	Simple_repeat	1	17	(0)	242530
14	6.9	0.0	10.5	chr1	165827486	165827523	(83128899)	+	G-rich	Low_complexity	1	38	(0)	244381
2583	9.1	0.0	0.0	chr1	166353991	166354299	(82602123)	+	AluY	SINE/Alu	1	309	(2)	245154
223	30.1	4.6	4.6	chr1	166354302	166354409	(82602013)	+	MER5A	DNA/hAT-Charlie	63	170	(19)	245155
203	28.3	5.2	14.9	chr1	166842420	166842614	(82113808)	C	L2c	LINE/L2	(68)	3307	3133	245782
765	18.0	0.5	18.1	chr1	166842686	166842922	(82113500)	+	MER20	DNA/hAT-Charlie	25	219	(0)	245783
475	22.6	2.1	2.8	chr1	166842959	166843099	(82113323)	+	Charlie2b	DNA/hAT-Charlie	2354	2493	(289)	245784
274	29.2	8.5	3.0	chr1	166843102	166843302	(82113120)	C	L2c	LINE/L2	(257)	3130	2918	245782
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
12	13.9	0.0	0.0	chr1	167220935	167220958	(81735464)	+	(CAG)n	Simple_repeat	1	24	(0)	246372
23	19.6	2.6	5.1	chr1	167221216	167221292	(81735130)	+	(CCG)n	Simple_repeat	1	79	(0)	246373
3953	13.1	5.7	0.5	chr1	167356546	167357205	(81599217)	C	MER50B	LTR/ERV1	(0)	697	1	246583
441	28.2	8.5	10.2	chr1	167357206	167357337	(81599085)	C	L1ME3G	LINE/L1	(2046)	4100	3958	246579
30	13.7	0.0	0.0	chr1	167357341	167357388	(81599034)	+	(C)n	Simple_repeat	1	48	(0)	246584
1752	19.1	1.0	0.3	chr1	167357391	167357678	(81598744)	C	AluJb	SINE/Alu	(22)	290	1	246585
290	23.5	5.0	3.4	chr1	167357683	167357801	(81598621)	C	L1ME3G	LINE/L1	(2182)	3964	3844	246579
2409	10.3	0.0	0.0	chr1	167357802	167358101	(81598321)	C	AluSc	SINE/Alu	(9)	300	1	246586
453	22.1	15.8	0.6	chr1	167448190	167448346	(81508076)	C	MIR	SINE/MIR	(68)	200	2	246702
517	29.7	1.5	0.0	chr1	167628713	167628840	(81327582)	C	MIRb	SINE/MIR	(119)	149	20	247024
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
665	28.8	13.3	0.0	chr1	167933858	167934072	(81022350)	C	MIRb	SINE/MIR	(5)	263	16	247568
217	23.8	9.1	4.0	chr1	167934997	167935128	(81021294)	C	MIRb	SINE/MIR	(48)	182	48	247569
1148	13.7	0.0	0.0	chr1	168225441	168225608	(80730814)	C	AluJo	SINE/Alu	(11)	301	134	248046
1065	25.5	22.6	2.3	chr1	169915428	169916166	(79040256)	C	L1MEd	LINE/L1	(5974)	1112	204	250640
62	0.0	0.0	0.0	chr1	169916178	169916230	(79040192)	+	(GT)n	Simple_repeat	1	53	(0)	250641
233	20.9	18.6	1.9	chr1	169916428	169916534	(79039888)	C	L1M6	LINE/L1	(4513)	1983	1855	250642
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
606	25.8	15.1	4.5	chr1	172637285	172637776	(76318646)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	4	254489
769	32.1	5.0	1.3	chr1	172637816	172638124	(76318298)	C	MER102c	DNA/hAT-Charlie	(1)	330	10	254490
5756	14.5	14.2	2.5	chr1	173352348	173353431	(75602991)	C	MER11B	LTR/ERVK	(4)	1232	1	255475
18	14.7	0.0	0.0	chr1	174166231	174166260	(74790162)	+	(T)n	Simple_repeat	1	30	(0)	256825
3966	5.3	5.3	0.2	chr1	178554076	178554562	(70401860)	C	MER9a2	LTR/ERVK	(0)	513	1	263261
33775	5.0	1.6	0.3	chr1	178554563	178559396	(70397026)	C	HERVK9-int	LTR/ERVK	(0)	6021	1125	263261
13	19.5	0.0	2.7	chr1	178726029	178726065	(70230357)	+	G-rich	Low_complexity	1	37	(0)	263569
8172	3.1	2.2	30.7	chr1	179039732	179041686	(69914736)	C	SVA_D	Retroposon/SVA	(0)	1386	1	264041
2180	9.6	0.0	5.7	chr1	179083390	179083703	(69872719)	C	AluSg	SINE/Alu	(9)	301	6	264113
13	10.0	5.9	2.8	chr1	179083739	179083772	(69872650)	+	(TTGCAT)n	Simple_repeat	1	36	(0)	264114
32	3.0	0.0	0.0	chr1	179229633	179229666	(69726756)	+	(CGC)n	Simple_repeat	1	34	(0)	264400
27	24.7	2.5	4.9	chr1	179229712	179229831	(69726591)	+	(CCCGCCC)n	Simple_repeat	1	123	(0)	264401
212	30.0	8.2	2.2	chr1	180194485	180194576	(68761846)	C	MIRc	SINE/MIR	(55)	213	116	266018
21	16.0	1.6	6.2	chr1	180229723	180229785	(68726637)	+	(GCCCC)n	Simple_repeat	1	64	(0)	266082
19	11.7	2.7	0.0	chr1	180229938	180229975	(68726447)	+	(GGCGGA)n	Simple_repeat	1	39	(0)	266083
22	15.5	0.0	0.0	chr1	180229990	180230032	(68726390)	+	(GCCCC)n	Simple_repeat	1	43	(0)	266084
17	14.8	3.8	1.2	chr1	180230210	180230254	(68726168)	+	G-rich	Low_complexity	1	46	(0)	266085
1941	10.1	9.2	0.4	chr1	180584364	180584639	(68371783)	C	AluSq2	SINE/Alu	(10)	303	1	266619
228	28.2	6.6	0.0	chr1	180584844	180584928	(68371494)	+	MER113	DNA/hAT-Charlie	43	133	(388)	266620
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
201	30.8	2.8	8.0	chr1	181425552	181425664	(67530758)	C	MIR3	SINE/MIR	(0)	208	102	267971
12	14.8	6.5	7.6	chr1	181425724	181425785	(67530637)	+	(CTCTTT)n	Simple_repeat	1	66	(0)	267972
64	24.1	0.9	4.8	chr1	182299813	182299996	(66656426)	+	GA-rich	Low_complexity	1	176	(0)	269195
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
19	19.6	1.4	6.8	chr1	182391987	182392059	(66564363)	+	G-rich	Low_complexity	1	74	(0)	269391
388	34.4	9.6	0.0	chr1	182782269	182782419	(66174003)	+	LTR88a	LTR/Gypsy?	227	393	(423)	270050
21	3.4	0.0	3.1	chr1	182962561	182962592	(65993830)	+	(ACAA)n	Simple_repeat	1	32	(0)	270347
18	23.7	0.0	6.8	chr1	183472319	183472363	(65484059)	+	(CCCTCT)n	Simple_repeat	1	70	(0)	271188
17	18.8	0.0	0.0	chr1	183472364	183472394	(65484028)	+	(C)n	Simple_repeat	1	31	(0)	271189
12	5.5	0.0	0.0	chr1	183472602	183472620	(65483802)	+	(GCG)n	Simple_repeat	1	19	(0)	271190
2827	19.2	8.5	1.7	chr1	185017250	185017937	(63938485)	+	MER72B	LTR/ERV1	1	739	(29)	273597
825	27.7	5.0	0.8	chr1	185018040	185018290	(63938132)	+	L2a	LINE/L2	1549	1810	(1609)	273598
21	22.2	1.3	5.3	chr1	185317244	185317318	(63639104)	+	(GCC)n	Simple_repeat	1	76	(0)	274052
18	9.3	0.0	7.3	chr1	185317384	185317424	(63638998)	+	(GCCCC)n	Simple_repeat	1	41	(0)	274053
1921	23.5	9.7	0.2	chr1	186194869	186195200	(62761222)	+	ERVL-E-int	LTR/ERVL	436	798	(4869)	275258
379	25.9	5.0	7.1	chr1	186195201	186195383	(62761039)	+	MER5C	DNA/hAT-Charlie	135	313	(0)	275260
480	29.3	3.1	2.5	chr1	186195390	186195550	(62760872)	C	MIRb	SINE/MIR	(89)	179	18	275261
1567	22.1	8.3	1.4	chr1	193056507	193056942	(55899480)	C	BLACKJACK	DNA/hAT-Blackjack	(1370)	1599	1131	284284
278	27.8	16.4	1.5	chr1	193057109	193057243	(55899179)	+	L2	LINE/L2	2430	2588	(831)	284285
1933	14.4	4.0	0.0	chr1	193110509	193110800	(55845622)	+	AluJr	SINE/Alu	1	304	(8)	284374
1039	17.0	15.4	2.9	chr1	193110801	193110921	(55845501)	+	MER90	LTR/ERV1	151	313	(262)	284373
452	14.5	2.6	0.0	chr1	193110953	193111028	(55845394)	C	MER89	LTR/ERV1	(481)	78	1	284375
239	19.8	7.0	2.6	chr1	193111067	193111137	(55845285)	C	L2a	LINE/L2	(0)	3426	3319	284376
478	24.8	4.7	5.3	chr1	193111232	193111401	(55845021)	+	MER58C	DNA/hAT-Charlie	46	214	(1)	284377
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
18	14.7	4.3	2.0	chr1	197201312	197201358	(51755064)	+	(CCCCT)n	Simple_repeat	1	49	(0)	289611
15	7.6	3.6	0.0	chr1	197902930	197902957	(51053465)	+	(CCCGC)n	Simple_repeat	1	29	(0)	290519
15	4.8	4.5	0.0	chr1	197903196	197903217	(51053205)	+	(TG)n	Simple_repeat	1	23	(0)	290520
26	27.1	0.0	0.0	chr1	197928894	197928962	(51027460)	+	A-rich	Low_complexity	1	69	(0)	290533
23	22.3	2.9	1.4	chr1	197929267	197929336	(51027086)	+	(TTATTA)n	Simple_repeat	1	72	(0)	290534
645	27.9	8.0	0.0	chr1	199931786	199932004	(49024418)	C	Charlie1	DNA/hAT-Charlie	(2542)	239	2	293259
1656	18.8	8.2	6.1	chr1	199932023	199932413	(49024009)	+	MLT1A1	LTR/ERVL-MaLR	6	405	(3)	293260
11	16.9	2.9	2.8	chr1	200409131	200409165	(48547257)	+	(TGGTGC)n	Simple_repeat	1	36	(0)	294189
18	4.2	0.0	0.0	chr1	200409262	200409286	(48547136)	+	(GTG)n	Simple_repeat	1	25	(0)	294190
33	26.5	0.0	0.0	chr1	200409595	200409678	(48546744)	+	(GCC)n	Simple_repeat	1	84	(0)	294191
14	12.9	2.6	5.1	chr1	200409732	200409769	(48546653)	+	GA-rich	Low_complexity	1	39	(0)	294192
430	24.4	15.5	2.1	chr1	200670728	200670966	(48285456)	C	L1ME3F	LINE/L1	(126)	6117	5841	294762
784	22.0	6.4	0.0	chr1	200670967	200671157	(48285265)	+	Arthur1B	DNA/hAT-Tip100	576	779	(446)	294763
583	19.4	3.1	2.5	chr1	200671168	200671326	(48285096)	+	Arthur1	DNA/hAT-Tip100	3787	3946	(1)	294764
373	30.1	14.2	2.1	chr1	201015980	201016180	(47940242)	C	MIRb	SINE/MIR	(1)	261	39	295374
329	28.6	3.8	7.2	chr1	201309567	201309732	(47646690)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3652	295814
450	25.3	10.6	0.5	chr1	201309738	201309909	(47646513)	+	MER20B	DNA/hAT-Charlie	32	219	(0)	295815
3635	16.1	4.0	1.3	chr1	201577608	201578362	(47378060)	C	L1MD1	LINE/L1	(4575)	2058	1283	296297
2870	22.4	4.6	11.0	chr1	201578363	201578852	(47377570)	C	L1MD1	LINE/L1	(5824)	809	349	296297
2155	10.9	0.0	0.0	chr1	201578853	201579146	(47377276)	+	AluSq2	SINE/Alu	3	296	(17)	296300
442	21.8	12.0	2.6	chr1	201882712	201882862	(47073560)	+	MIRb	SINE/MIR	50	216	(52)	296783
353	34.3	2.7	7.3	chr1	201883155	201883387	(47073035)	+	MamGypLTR1b	LTR/Gypsy	37	258	(526)	296784
491	26.2	11.3	0.0	chr1	202018807	202018955	(46937467)	+	L2b	LINE/L2	3201	3368	(7)	297044
291	26.4	1.9	10.2	chr1	202106180	202106297	(46850125)	+	MIR3	SINE/MIR	73	180	(28)	297299
214	31.2	4.9	2.5	chr1	202119197	202119275	(46837147)	C	L2b	LINE/L2	(1)	3374	3294	297331
1735	16.2	1.1	1.8	chr1	202119282	202119565	(46836857)	+	AluJo	SINE/Alu	1	282	(30)	297332
187	35.7	5.6	0.0	chr1	202203841	202203924	(46752498)	+	MIRb	SINE/MIR	135	223	(45)	297475
12	28.1	1.9	1.9	chr1	202808521	202808573	(46147849)	+	(CCCGC)n	Simple_repeat	1	54	(0)	298520
336	35.6	8.8	7.0	chr1	202809140	202809541	(46146881)	C	L2c	LINE/L2	(694)	2725	2316	298521
713	21.2	2.7	0.0	chr1	202809547	202809692	(46146730)	C	MIR	SINE/MIR	(16)	246	97	298523
322	21.7	12.2	0.0	chr1	202810167	202810281	(46146141)	+	L1ME2z	LINE/L1	6307	6437	(7)	298524
1679	12.8	5.3	2.7	chr1	202927401	202927696	(46028726)	+	AluJb	SINE/Alu	1	304	(8)	298768
2172	9.9	0.3	1.7	chr1	202967515	202967816	(45988606)	C	AluSz	SINE/Alu	(14)	298	1	298830
656	31.6	5.7	1.7	chr1	203625949	203626183	(45330239)	+	MIRb	SINE/MIR	16	260	(8)	299982
56	0.0	0.0	0.0	chr1	203626273	203626320	(45330102)	+	(GT)n	Simple_repeat	1	48	(0)	299983
2006	14.9	0.0	0.3	chr1	203692180	203692468	(45263954)	C	AluJb	SINE/Alu	(14)	298	11	300112
365	31.8	11.6	2.2	chr1	203692492	203692671	(45263751)	C	L3b	LINE/CR1	(26)	5206	5008	300113
19	11.7	0.0	0.0	chr1	203769774	203769801	(45186621)	+	(G)n	Simple_repeat	1	28	(0)	300270
565	28.7	10.3	3.3	chr1	203769949	203770128	(45186294)	+	MIRb	SINE/MIR	3	196	(72)	300271
225	23.6	5.3	2.2	chr1	203990027	203990117	(44966305)	+	L1M5	LINE/L1	5834	5927	(197)	300730
380	29.8	9.2	3.4	chr1	203990361	203990596	(44965826)	+	MLT1I	LTR/ERVL-MaLR	145	395	(16)	300731
147	20.1	4.2	4.2	chr1	204416648	204417105	(44539317)	+	GA-rich	Low_complexity	1	477	(0)	301507
1828	27.0	20.7	1.4	chr1	204417461	204418214	(44538208)	+	L2c	LINE/L2	941	1830	(1589)	301508
32	23.2	4.5	0.0	chr1	204466610	204466697	(44489725)	+	GA-rich	Low_complexity	1	92	(0)	301576
15	0.0	3.9	3.7	chr1	204624712	204624737	(44331685)	+	(CTCTC)n	Simple_repeat	1	27	(0)	301916
16	5.2	0.0	0.0	chr1	204624747	204624766	(44331656)	+	(C)n	Simple_repeat	1	20	(0)	301917
327	28.2	12.1	0.8	chr1	204711488	204711612	(44244810)	+	MIRb	SINE/MIR	125	265	(3)	302113
763	21.7	0.0	6.1	chr1	204711836	204712031	(44244391)	+	MIR	SINE/MIR	50	233	(29)	302114
983	26.0	4.4	7.5	chr1	205153415	205153719	(43802703)	+	L1MC4	LINE/L1	7588	7867	(175)	302891
1868	10.9	2.1	6.8	chr1	205153720	205154013	(43802409)	C	AluSx	SINE/Alu	(32)	280	1	302892
983	26.0	4.4	7.5	chr1	205154014	205154056	(43802366)	+	L1MC4	LINE/L1	7868	7910	(132)	302891
34	0.0	0.0	0.0	chr1	205154057	205154085	(43802337)	+	(GT)n	Simple_repeat	1	29	(0)	302893
983	26.2	5.0	6.7	chr1	205154086	205154215	(43802207)	+	L1MC4	LINE/L1	7911	8038	(4)	302891
2042	13.8	0.0	1.0	chr1	205200041	205200337	(43756085)	C	AluSx1	SINE/Alu	(18)	294	1	302980
2297	5.8	1.1	0.0	chr1	205229208	205229485	(43726937)	C	AluSx1	SINE/Alu	(31)	281	1	303046
24	14.3	0.0	0.0	chr1	205229541	205229579	(43726843)	+	(G)n	Simple_repeat	1	39	(0)	303047
18	15.5	0.0	0.0	chr1	205230818	205230847	(43725575)	+	(T)n	Simple_repeat	1	30	(0)	303048
16	18.1	3.7	3.6	chr1	205230960	205231013	(43725409)	+	(CCCCCCA)n	Simple_repeat	1	56	(0)	303049
272	24.3	10.4	0.0	chr1	205231185	205231280	(43725142)	+	MIRc	SINE/MIR	51	160	(108)	303050
1993	17.3	0.0	0.0	chr1	205231296	205231596	(43724826)	C	AluJr	SINE/Alu	(11)	301	1	303051
15	13.9	0.0	0.0	chr1	205259182	205259205	(43697217)	+	(T)n	Simple_repeat	1	24	(0)	303082
230	26.4	7.5	2.2	chr1	205259425	205259513	(43696909)	C	MamRep564	Unknown	(123)	234	141	303083
201	30.5	0.0	5.8	chr1	205285285	205285371	(43671051)	C	L3b	LINE/CR1	(162)	3937	3856	303135
2081	11.0	5.8	2.3	chr1	205288605	205288905	(43667517)	C	AluSx	SINE/Alu	(0)	312	1	303142
12	21.6	0.0	4.9	chr1	205450097	205450137	(43506285)	+	G-rich	Low_complexity	1	41	(0)	303452
17	22.6	1.8	3.5	chr1	205450323	205450378	(43506044)	+	(TCCC)n	Simple_repeat	1	57	(0)	303453
17	24.1	1.6	3.2	chr1	205457393	205457454	(43498968)	+	(CCGCC)n	Simple_repeat	1	63	(0)	303463
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
15	29.1	1.9	0.0	chr1	205631725	205631778	(43324644)	+	(CGG)n	Simple_repeat	1	55	(0)	303803
2413	8.5	0.0	0.7	chr1	205657267	205657571	(43298851)	C	AluSq2	SINE/Alu	(6)	307	5	303866
47	0.0	0.0	0.0	chr1	205679686	205679725	(43276697)	+	(AC)n	Simple_repeat	1	40	(0)	303895
1461	23.7	3.7	4.7	chr1	206545200	206545336	(42411086)	C	L1MEc	LINE/L1	(3558)	2761	2626	305274
2307	18.2	3.3	0.2	chr1	206548186	206548598	(42407824)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	305282
4462	18.9	8.2	10.2	chr1	206548599	206548859	(42407563)	C	L1MEc	LINE/L1	(4950)	1450	1174	305274
2366	11.1	0.0	0.0	chr1	206548860	206549165	(42407257)	C	AluSx1	SINE/Alu	(6)	306	1	305283
17	17.3	5.3	4.2	chr1	206556820	206556878	(42399544)	+	G-rich	Low_complexity	1	59	(0)	305297
1459	11.6	5.3	17.1	chr1	206612818	206613001	(42343421)	+	AluJb	SINE/Alu	1	132	(180)	305398
2249	6.6	0.4	0.0	chr1	206613002	206613273	(42343149)	+	AluSp	SINE/Alu	39	311	(2)	305399
14	25.2	4.2	0.0	chr1	206685147	206685194	(42271228)	+	(GGC)n	Simple_repeat	1	50	(0)	305524
33	21.8	4.1	1.0	chr1	206685257	206685353	(42271069)	+	(CCG)n	Simple_repeat	1	101	(0)	305525
206	28.0	9.1	0.0	chr1	206906975	206907024	(42049398)	C	L2b	LINE/L2	(9)	3366	3312	305895
31	13.6	0.0	0.0	chr1	206907081	206907129	(42049293)	+	(G)n	Simple_repeat	1	49	(0)	305896
271	26.2	8.0	2.3	chr1	206907319	206907447	(42048975)	+	MLT1J	LTR/ERVL-MaLR	235	371	(141)	305897
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
2145	10.2	1.9	0.3	chr1	206947596	206947901	(42008521)	C	L1PA10	LINE/L1	(1)	6167	5857	305964
566	22.0	0.6	8.7	chr1	206947906	206948089	(42008333)	C	MamGypLTR2b	LTR/Gypsy	(71)	851	683	305965
23	3.4	3.3	0.0	chr1	207021732	207021761	(41934661)	+	(CA)n	Simple_repeat	1	31	(0)	306093
18	18.3	1.5	0.7	chr1	207025067	207025112	(41931310)	+	G-rich	Low_complexity	1	46	(0)	306096
424	31.6	1.1	4.5	chr1	207025667	207025865	(41930557)	C	Tigger19a	DNA/TcMar-Tigger	(74)	249	58	306097
17774	10.6	1.3	1.8	chr1	207745200	207747909	(41208513)	+	HUERS-P3b-int	LTR/ERV1	4713	7409	(9)	307095
306	26.2	14.3	3.1	chr1	207811824	207811953	(41144469)	C	MIR3	SINE/MIR	(25)	183	37	307161
1928	16.6	7.5	6.1	chr1	209692272	209692747	(39263675)	C	MER31A	LTR/ERV1	(0)	543	1	310049
250	27.6	10.9	3.1	chr1	209692748	209692874	(39263548)	C	MER5B	DNA/hAT-Charlie	(40)	138	1	310050
19	8.1	0.0	0.0	chr1	210311118	210311143	(38645279)	+	(C)n	Simple_repeat	1	26	(0)	310954
48	0.0	0.0	0.0	chr1	210311160	210311200	(38645222)	+	(AC)n	Simple_repeat	1	41	(0)	310955
14	29.9	1.4	2.9	chr1	211259878	211259946	(37696476)	+	(CCCCCCG)n	Simple_repeat	1	70	(0)	312392
22	32.2	0.0	0.0	chr1	211260024	211260092	(37696330)	+	(TT)n	Simple_repeat	1	69	(0)	312393
3339	24.1	13.1	7.7	chr1	211385937	211387546	(37568876)	+	L1ME1	LINE/L1	3309	5028	(1118)	312620
17	13.9	0.0	6.7	chr1	211578934	211578978	(37377444)	+	(CCGGAG)n	Simple_repeat	1	45	(0)	312976
17	25.8	3.9	2.5	chr1	211579416	211579494	(37376928)	+	(GGCGCGG)n	Simple_repeat	1	80	(0)	312977
508	24.4	2.5	1.7	chr1	211655195	211655311	(37301111)	+	MIRb	SINE/MIR	117	234	(34)	313144
578	38.2	6.3	2.4	chr1	211722836	211723170	(37233252)	+	L2b	LINE/L2	3027	3375	(0)	313261
185	31.9	6.2	1.1	chr1	211932402	211932493	(37023929)	C	L2c	LINE/L2	(652)	2767	2671	313653
16	13.9	2.3	4.5	chr1	211932656	211932700	(37023722)	+	(ACCCC)n	Simple_repeat	1	44	(0)	313656
2383	9.4	0.0	0.0	chr1	212151666	212151964	(36804458)	+	AluSq2	SINE/Alu	1	299	(14)	313997
378	20.8	3.6	12.6	chr1	212151978	212152159	(36804263)	C	Charlie18a	DNA/hAT-Charlie	(108)	234	70	313998
6053	12.5	2.7	4.0	chr1	212192907	212193940	(36762482)	C	L1MA9	LINE/L1	(0)	6312	5292	314086
420	15.4	0.0	0.0	chr1	212193942	212194006	(36762416)	+	L1MC1	LINE/L1	6268	6332	(1)	314085
708	20.4	0.7	0.0	chr1	212194009	212194145	(36762277)	+	L1MC3	LINE/L1	7022	7159	(626)	314087
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
665	30.5	5.5	1.3	chr1	212665964	212666189	(36290233)	+	MIR	SINE/MIR	24	259	(3)	314925
55	0.0	0.0	0.0	chr1	214214172	214214218	(34742204)	+	(CA)n	Simple_repeat	1	47	(0)	317370
16	9.3	0.0	0.0	chr1	214465036	214465058	(34491364)	+	(C)n	Simple_repeat	1	23	(0)	317743
331	34.1	3.5	2.1	chr1	214465166	214465306	(34491116)	C	MIR	SINE/MIR	(119)	143	1	317744
2110	14.2	0.7	3.6	chr1	214465328	214465630	(34490792)	+	AluJb	SINE/Alu	1	294	(18)	317745
18	17.9	2.3	0.0	chr1	214603356	214603399	(34353023)	+	(GGCGGCG)n	Simple_repeat	1	45	(0)	317968
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
16	9.3	0.0	0.0	chr1	215568483	215568505	(33387917)	+	(C)n	Simple_repeat	1	23	(0)	319247
229	39.7	4.5	0.8	chr1	218284454	218284580	(30671842)	C	L2b	LINE/L2	(0)	3375	3244	322998
12946	12.1	2.8	2.7	chr1	219116345	219118515	(29837907)	+	L1PA13	LINE/L1	3147	5319	(1447)	324170
7253	22.6	3.3	1.3	chr1	219718276	219720459	(29235963)	+	L1MDa	LINE/L1	18	2487	(4146)	325032
2055	12.5	0.0	0.0	chr1	219906550	219906860	(29049562)	C	AluSx1	SINE/Alu	(0)	312	1	325303
16	21.3	0.0	0.0	chr1	219907498	219907530	(29048892)	+	A-rich	Low_complexity	1	33	(0)	325304
242	29.8	16.1	1.4	chr1	220168960	220169102	(28787320)	C	Tigger19a	DNA/TcMar-Tigger	(0)	323	156	325815
304	23.1	2.6	12.1	chr1	220169417	220169576	(28786846)	C	L2c	LINE/L2	(176)	3199	3024	325816
16	0.0	0.0	0.0	chr1	221709003	221709019	(27247403)	+	(A)n	Simple_repeat	1	17	(0)	328057
12	0.0	3.9	7.4	chr1	223364314	223364339	(25592083)	+	(GCG)n	Simple_repeat	1	27	(0)	330584
200	35.9	0.0	0.0	chr1	223616953	223617016	(25339406)	C	MIR1_Amn	SINE/MIR	(98)	132	69	330911
31	5.5	6.8	1.6	chr1	223617292	223617350	(25339072)	+	(TTGTT)n	Simple_repeat	1	63	(0)	330912
512	34.8	8.3	0.0	chr1	223617700	223617932	(25338490)	C	MIRc	SINE/MIR	(0)	268	15	330913
326	17.7	0.0	0.0	chr1	223846635	223846696	(25109726)	+	L1MB4	LINE/L1	6118	6179	(1)	331315
2258	23.1	7.3	5.5	chr1	224113727	224113840	(24842582)	C	L1MC4	LINE/L1	(835)	7207	7102	331809
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
41	21.7	1.3	6.5	chr1	224434409	224434559	(24521863)	+	G-rich	Low_complexity	1	153	(0)	332550
36	25.6	4.1	2.6	chr1	224434585	224434730	(24521692)	+	(CGG)n	Simple_repeat	1	152	(0)	332551
536	28.1	6.5	8.7	chr1	224531898	224532197	(24424225)	C	L2a	LINE/L2	(0)	3426	3134	332741
858	22.5	12.8	4.8	chr1	224532237	224532614	(24423808)	C	L2a	LINE/L2	(399)	3020	2608	332741
366	23.6	4.3	0.0	chr1	224532851	224532939	(24423483)	C	MIRb	SINE/MIR	(67)	201	109	332742
15	14.6	5.3	0.0	chr1	225593072	225593109	(23363313)	+	(TAACTA)n	Simple_repeat	1	40	(0)	334198
258	30.4	10.1	1.8	chr1	225593183	225593346	(23363076)	C	Charlie16a	DNA/hAT-Charlie	(91)	251	73	334199
20	4.3	0.0	0.0	chr1	225593401	225593424	(23362998)	+	(G)n	Simple_repeat	1	24	(0)	334200
17	12.7	0.0	0.0	chr1	225924502	225924527	(23031895)	+	(C)n	Simple_repeat	1	26	(0)	334819
2455	5.8	0.0	0.0	chr1	225924882	225925175	(23031247)	C	AluSq	SINE/Alu	(19)	294	1	334820
2389	10.4	0.0	0.3	chr1	225927298	225927605	(23028817)	+	AluSx1	SINE/Alu	1	307	(5)	334825
2254	10.2	0.0	0.0	chr1	225961885	225962177	(22994245)	C	AluSg	SINE/Alu	(17)	293	1	334900
282	25.4	2.7	0.0	chr1	225962681	225962751	(22993671)	C	MIR3	SINE/MIR	(72)	136	64	334901
12	23.0	6.9	1.6	chr1	226062414	226062471	(22893951)	+	G-rich	Low_complexity	1	62	(0)	335129
22	24.4	3.0	4.8	chr1	226062503	226062528	(22893894)	+	G-rich	Low_complexity	1	52	(51)	335129
17	25.9	3.9	0.0	chr1	226062529	226062579	(22893843)	+	(GC)n	Simple_repeat	1	53	(0)	335130
22	24.4	3.0	4.8	chr1	226062580	226062602	(22893820)	+	G-rich	Low_complexity	53	103	(0)	335129
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
462	29.3	7.6	3.1	chr1	226187088	226187249	(22769173)	C	MIRc	SINE/MIR	(11)	257	88	335386
1137	18.5	5.4	18.7	chr1	226187253	226187644	(22768778)	C	Arthur1	DNA/hAT-Tip100	(2)	3945	3638	335387
27	3.4	0.0	0.0	chr1	226187645	226187674	(22768748)	+	(T)n	Simple_repeat	1	30	(0)	335388
2031	10.9	0.4	0.4	chr1	226187681	226187954	(22768468)	C	AluSx1	SINE/Alu	(37)	275	2	335389
1703	26.4	5.8	3.0	chr1	226282000	226282538	(22673884)	C	L1ME4b	LINE/L1	(142)	750	193	335597
2611	6.8	0.0	0.0	chr1	226282539	226282849	(22673573)	+	AluSx1	SINE/Alu	1	311	(1)	335598
2343	9.2	0.7	0.0	chr1	226288958	226289261	(22667161)	+	AluSx4	SINE/Alu	2	307	(3)	335608
347	31.8	10.6	8.8	chr1	226289262	226289362	(22667060)	+	L1ME3Cz	LINE/L1	4693	4779	(1367)	335607
1903	16.4	0.3	0.7	chr1	226289363	226289661	(22666761)	C	AluJo	SINE/Alu	(14)	298	1	335609
1191	28.7	10.6	8.4	chr1	226289662	226290329	(22666093)	+	L1ME3Cz	LINE/L1	3	187	(737)	335607
24	21.1	5.5	1.3	chr1	226646007	226646079	(22310343)	+	(CT)n	Simple_repeat	1	77	(0)	336231
18	12.6	0.0	0.0	chr1	226739332	226739358	(22217064)	+	(A)n	Simple_repeat	1	27	(0)	336366
14	24.3	4.3	4.2	chr1	226739366	226739434	(22216988)	+	G-rich	Low_complexity	1	72	(0)	336367
19	12.1	0.0	0.0	chr1	226739472	226739499	(22216923)	+	(T)n	Simple_repeat	1	28	(0)	336368
5851	14.4	10.3	3.0	chr1	227187125	227188442	(21767980)	+	L1MC1	LINE/L1	773	2196	(4312)	337048
1276	24.2	7.8	3.2	chr1	227243889	227244587	(21711835)	+	L1ME3	LINE/L1	5343	6097	(65)	337147
11986	16.0	10.0	4.2	chr1	227244601	227245284	(21711138)	+	L1MA2	LINE/L1	17	740	(6825)	337150
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
14	18.9	0.0	2.6	chr1	227887154	227887191	(21069231)	+	G-rich	Low_complexity	1	38	(0)	338015
305	27.7	6.9	5.5	chr1	228178794	228179075	(20777347)	C	MER74B	LTR/ERVL	(165)	457	124	338391
1930	26.7	13.2	2.3	chr1	228179212	228179873	(20776549)	+	L1MEd	LINE/L1	784	1533	(5553)	338392
529	19.6	0.0	0.0	chr1	228199136	228199232	(20757190)	C	L1M4b	LINE/L1	(4711)	2156	2060	338431
2854	22.7	10.5	4.9	chr1	228199219	228200342	(20756080)	C	L1M4b	LINE/L1	(5012)	1855	661	338431
1496	27.7	11.8	9.1	chr1	228265493	228265785	(20690637)	+	L1M5	LINE/L1	3359	3647	(2499)	338512
243	10.4	11.1	0.0	chr1	228368503	228368550	(20587872)	C	L3	LINE/CR1	(115)	3984	3931	338610
35	27.5	4.0	1.9	chr1	228378431	228378580	(20577842)	+	(CCCCT)n	Simple_repeat	1	156	(0)	338615
1422	14.8	4.9	2.7	chr1	228489311	228489567	(20466855)	C	AluJr	SINE/Alu	(17)	295	33	338800
1525	18.2	1.8	0.4	chr1	228489645	228489925	(20466497)	C	MLT1A0	LTR/ERVL-MaLR	(80)	285	1	338801
407	29.7	10.8	6.8	chr1	229271914	229272090	(19684332)	+	L2c	LINE/L2	3190	3386	(1)	339988
227	31.2	5.4	2.8	chr1	229272352	229272496	(19683926)	C	L2a	LINE/L2	(1)	3425	3277	339989
21	11.2	0.0	0.0	chr1	229559386	229559415	(19397007)	+	(T)n	Simple_repeat	1	30	(0)	340497
1886	8.9	0.4	0.0	chr1	229559420	229559656	(19396766)	C	AluSx	SINE/Alu	(74)	238	1	340498
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
206	26.6	3.0	1.5	chr1	229754427	229754491	(19201931)	C	L2c	LINE/L2	(18)	3369	3304	340841
23	9.8	0.0	0.0	chr1	229754552	229754584	(19201838)	+	(CA)n	Simple_repeat	1	33	(0)	340842
3604	25.3	9.0	6.2	chr1	230064812	230065917	(18890505)	C	L1MC4	LINE/L1	(4637)	1578	416	341370
229	20.6	6.7	7.6	chr1	230066027	230066131	(18890291)	C	L1MC4	LINE/L1	(6003)	212	109	341370
16	20.3	0.0	2.4	chr1	230066975	230067016	(18889406)	+	(CCCCGC)n	Simple_repeat	1	42	(0)	341372
12	18.1	0.0	3.0	chr1	230067368	230067400	(18889022)	+	(GCGCCG)n	Simple_repeat	1	33	(0)	341373
20	20.9	4.4	5.3	chr1	230067416	230067506	(18888916)	+	(GCCCCCT)n	Simple_repeat	1	95	(0)	341374
482	27.2	3.4	8.8	chr1	230111948	230112197	(18844225)	C	MLT1O	LTR/ERVL-MaLR	(10)	532	297	341436
12	20.9	0.0	7.8	chr1	230112656	230112706	(18843716)	+	G-rich	Low_complexity	1	51	(0)	341437
2171	11.4	0.3	0.0	chr1	230127384	230127672	(18828750)	C	AluSc	SINE/Alu	(19)	290	1	341451
36	2.9	0.0	0.0	chr1	230156211	230156245	(18800177)	+	(GA)n	Simple_repeat	1	35	(0)	341483
21	0.0	0.0	0.0	chr1	230156246	230156268	(18800154)	+	(TG)n	Simple_repeat	1	23	(0)	341484
2320	15.4	5.4	0.5	chr1	230170561	230170965	(18785457)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	341503
13	7.0	6.2	2.9	chr1	230171290	230171321	(18785101)	+	(CTTAG)n	Simple_repeat	1	34	(0)	341504
75	15.9	3.8	0.6	chr1	230175527	230175684	(18780738)	+	(TCC)n	Simple_repeat	1	164	(0)	341508
31	23.6	3.3	7.9	chr1	230175685	230175708	(18780714)	+	(TTCCCC)n	Simple_repeat	2	189	(0)	341509
255	25.6	23.0	0.0	chr1	230175920	230176056	(18780366)	+	MIRb	SINE/MIR	81	258	(10)	341510
12	17.9	3.1	0.0	chr1	231039984	231040015	(17916407)	+	(CGCCCG)n	Simple_repeat	1	33	(0)	342810
294	34.8	10.0	5.1	chr1	231418420	231418581	(17537841)	+	MIRb	SINE/MIR	10	190	(78)	343467
1494	19.5	3.7	3.0	chr1	231418582	231418879	(17537543)	+	AluJo	SINE/Alu	1	300	(12)	343468
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
38	0.0	0.0	0.0	chr1	234491193	234491225	(14465197)	+	(AC)n	Simple_repeat	1	33	(0)	347951
23	12.6	0.0	0.0	chr1	234491226	234491260	(14465162)	+	(GA)n	Simple_repeat	1	35	(0)	347952
15	13.9	0.0	0.0	chr1	234507342	234507365	(14449057)	+	(C)n	Simple_repeat	1	24	(0)	347991
1195	8.0	5.8	0.0	chr1	234507488	234507650	(14448772)	C	MER30	DNA/hAT-Charlie	(1)	229	57	347992
18	12.0	0.0	0.0	chr1	234607054	234607080	(14349342)	+	(AT)n	Simple_repeat	1	27	(0)	348162
16	17.7	2.6	0.0	chr1	234609455	234609492	(14346930)	+	(GCC)n	Simple_repeat	1	39	(0)	348164
19	7.2	0.0	0.0	chr1	234609516	234609544	(14346878)	+	(GGA)n	Simple_repeat	1	29	(0)	348165
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
15	27.6	0.0	0.0	chr1	234611146	234611184	(14345238)	+	GA-rich	Low_complexity	1	39	(0)	348169
46	0.0	0.0	0.0	chr1	234723720	234723758	(14232664)	+	(TG)n	Simple_repeat	1	39	(0)	348334
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
256	29.2	6.8	2.8	chr1	234751116	234751256	(14205166)	+	UCON4	Unknown	157	303	(0)	348383
2840	19.1	3.4	4.3	chr1	234779566	234779791	(14176631)	+	LTR49	LTR/ERV1	1	231	(364)	348425
1015	22.3	8.9	7.0	chr1	234851836	234852073	(14104349)	+	LTR16A2	LTR/ERVL	83	317	(178)	348541
822	18.1	3.9	1.7	chr1	234852074	234852247	(14104175)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	348542
371	27.8	16.5	2.1	chr1	234893352	234893542	(14062880)	C	L2b	LINE/L2	(45)	3330	3107	348619
234	25.0	12.5	5.6	chr1	234893615	234893703	(14062719)	C	Charlie17a	DNA/hAT-Charlie	(4)	213	118	348620
404	28.7	14.6	0.0	chr1	234893825	234893988	(14062434)	C	MIRc	SINE/MIR	(16)	252	61	348621
42	0.0	2.4	0.0	chr1	234894106	234894147	(14062275)	+	(AAAC)n	Simple_repeat	1	43	(0)	348622
12	17.7	5.0	2.4	chr1	234961435	234961474	(13994948)	+	(TCTTT)n	Simple_repeat	1	42	(0)	348740
227	29.4	9.7	15.7	chr1	234976236	234976445	(13979977)	+	MamRTE1	LINE/RTE-BovB	2154	2349	(1463)	348766
1128	18.0	0.0	5.1	chr1	235954392	235954608	(13001814)	+	AluJo	SINE/Alu	85	290	(22)	350705
13	18.2	2.6	2.5	chr1	235954616	235954654	(13001768)	+	G-rich	Low_complexity	1	40	(0)	350706
1861	9.0	0.7	7.0	chr1	236349183	236349319	(12607103)	C	AluSx	SINE/Alu	(22)	290	156	351438
4874	6.0	6.8	9.6	chr1	236349320	236349832	(12606590)	C	MER4E	LTR/ERV1	(0)	766	276	351439
2138	11.9	2.3	0.0	chr1	236349833	236350127	(12606295)	+	AluSx	SINE/Alu	4	305	(7)	351440
2326	7.6	2.7	0.0	chr1	236351438	236351727	(12604695)	+	AluSc	SINE/Alu	1	298	(11)	351445
4051	11.5	0.8	2.0	chr1	236351728	236352219	(12604203)	C	MER41E	LTR/ERV1	(99)	496	1	351444
2523	8.0	0.0	0.6	chr1	236532560	236532873	(12423549)	+	AluSq2	SINE/Alu	1	312	(1)	351839
182	17.6	3.8	3.8	chr1	236532874	236532885	(12423537)	+	L2	LINE/L2	2497	2507	(912)	351835
2221	10.5	1.0	0.0	chr1	236533340	236533633	(12422789)	C	AluSp	SINE/Alu	(16)	297	1	351840
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
2202	19.8	9.3	1.7	chr1	243293832	243294482	(5661940)	C	L1MB4	LINE/L1	(5030)	1678	991	362361
41	4.7	0.0	0.0	chr1	243294483	243294526	(5661896)	+	(GA)n	Simple_repeat	1	44	(0)	362363
1155	18.1	3.6	9.1	chr1	243294527	243294742	(5661680)	C	L1MB4	LINE/L1	(6731)	990	679	362361
188	28.9	0.0	4.3	chr1	243473845	243473891	(5482531)	+	L3	LINE/CR1	17	61	(4038)	362653
18	12.2	0.0	0.0	chr1	243473920	243473946	(5482476)	+	(G)n	Simple_repeat	1	27	(0)	362654
22	22.9	4.1	1.3	chr1	243850046	243850118	(5106304)	+	(CGG)n	Simple_repeat	1	76	(0)	363167
13	32.1	0.0	0.0	chr1	243850081	243850130	(5106292)	+	G-rich	Low_complexity	1	50	(0)	363168
15	15.0	2.6	2.5	chr1	243850144	243850183	(5106239)	+	(CCCCT)n	Simple_repeat	1	40	(0)	363169
19	17.2	3.1	4.5	chr1	243850281	243850295	(5106127)	+	GA-rich	Low_complexity	1	15	(0)	363170
28	0.0	0.0	0.0	chr1	243850296	243850321	(5106101)	+	(GGC)n	Simple_repeat	1	26	(0)	363171
19	17.2	3.1	4.5	chr1	243850322	243850370	(5106052)	+	GA-rich	Low_complexity	16	63	(0)	363172
14	24.6	1.4	6.9	chr1	243850536	243850606	(5105816)	+	(CCG)n	Simple_repeat	1	72	(0)	363173
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
16	15.3	2.0	6.0	chr1	244048506	244048554	(4907868)	+	GA-rich	Low_complexity	1	50	(0)	363520
34	19.5	0.0	0.0	chr1	244048593	244048664	(4907758)	+	(C)n	Simple_repeat	1	72	(0)	363521
26	27.2	3.7	1.8	chr1	244048665	244048698	(4907724)	+	(CGCC)n	Simple_repeat	4	113	(0)	363522
22	25.3	1.2	3.7	chr1	244048798	244048877	(4907545)	+	G-rich	Low_complexity	1	81	(0)	363523
2176	7.2	0.7	0.0	chr1	244833995	244834271	(4122151)	C	AluSq4	SINE/Alu	(31)	280	2	364891
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
623	26.4	18.2	1.5	chr1	245337912	245338249	(3618173)	+	Tigger15a	DNA/TcMar-Tigger	244	650	(65)	365885
969	22.7	2.7	0.9	chr1	245338256	245338473	(3617949)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	365886
378	36.7	1.0	1.5	chr1	245957787	245957988	(2998434)	+	L3	LINE/CR1	1722	1922	(2177)	366743
2054	17.6	18.7	3.7	chr1	246110332	246110849	(2845573)	C	LTR18B	LTR/ERVL	(0)	614	1	366955
12	20.1	6.2	2.0	chr1	247332000	247332047	(1624375)	+	G-rich	Low_complexity	1	51	(0)	368975
1860	16.1	0.3	1.6	chr1	247347154	247347457	(1608965)	+	AluJb	SINE/Alu	1	300	(12)	369003
15	5.5	0.0	0.0	chr1	247347578	247347596	(1608826)	+	(C)n	Simple_repeat	1	19	(0)	369004
1529	19.8	0.3	9.9	chr1	247389720	247390042	(1566380)	C	MLT1A0	LTR/ERVL-MaLR	(57)	308	12	369082
16	17.7	1.7	6.8	chr1	247857488	247857545	(1098877)	+	G-rich	Low_complexity	1	59	(0)	369730
12	25.6	0.0	0.0	chr1	248838551	248838587	(117835)	+	G-rich	Low_complexity	1	37	(0)	370880
1016	18.8	13.9	21.5	chr1	248871847	248872192	(84230)	+	MER31B	LTR/ERV1	1	346	(120)	370913
523	20.7	4.8	1.6	chr1	248872199	248872319	(84103)	C	AluJb	SINE/Alu	(187)	125	1	370914
873	12.4	11.0	12.7	chr1	248872320	248872502	(83920)	+	MER31B	LTR/ERV1	277	464	(2)	370913
226	18.3	5.1	10.6	chr1	248872513	248872573	(83849)	+	LTR37B	LTR/ERV1	371	434	(34)	370911
26	0.0	0.0	0.0	chr1	248872574	248872598	(83824)	+	(TTATT)n	Simple_repeat	1	25	(0)	370915
2311	5.0	2.5	1.1	chr1	248872600	248872881	(83541)	C	AluSp	SINE/Alu	(26)	287	2	370916
184	27.8	1.4	0.9	chr10	608105	608733	(133188689)	+	(AC)n	Simple_repeat	1	632	(0)	371679
15	5.6	0.0	0.0	chr10	1049464	1049482	(132747940)	+	(C)n	Simple_repeat	1	19	(0)	372220
1995	13.1	1.4	0.0	chr10	1049662	1049952	(132747470)	C	AluSp	SINE/Alu	(18)	295	1	372221
63	0.0	0.0	0.0	chr10	1755625	1755678	(132041744)	+	(AC)n	Simple_repeat	1	54	(0)	372885
16	17.6	6.6	3.1	chr10	3067478	3067538	(130729884)	+	(GGCGCG)n	Simple_repeat	1	65	(0)	374579
17	25.1	6.7	0.0	chr10	3785252	3785326	(130012096)	+	(CCCGCC)n	Simple_repeat	1	80	(0)	375557
454	27.9	14.1	0.6	chr10	3890506	3890671	(129906751)	+	MER102c	DNA/hAT-Charlie	74	265	(66)	375713
241	22.8	0.0	3.4	chr10	3890734	3890792	(129906630)	+	MER102b	DNA/hAT-Charlie	283	339	(2)	375714
4359	11.5	1.4	0.6	chr10	3890830	3891458	(129905964)	+	MER41B	LTR/ERV1	1	634	(0)	375715
12	24.8	0.0	2.5	chr10	3895547	3895586	(129901836)	+	(AATG)n	Simple_repeat	1	40	(0)	375720
639	19.9	2.7	6.4	chr10	5976441	5976596	(127820826)	+	Charlie4z	DNA/hAT-Charlie	18	167	(0)	378666
51	16.0	2.1	0.0	chr10	6404195	6404287	(127393135)	+	GA-rich	Low_complexity	1	95	(0)	379455
259	17.8	1.1	2.5	chr10	6404368	6404903	(127392519)	+	(TTCT)n	Simple_repeat	1	528	(0)	379456
368	26.1	5.2	0.0	chr10	7028322	7028413	(126769009)	C	Charlie9	DNA/hAT-Charlie	(2660)	97	1	380441
294	29.5	1.3	0.0	chr10	7405707	7405784	(126391638)	C	MIR3	SINE/MIR	(49)	159	81	380962
15	14.4	0.0	0.0	chr10	7406249	7406272	(126391150)	+	(A)n	Simple_repeat	1	24	(0)	380963
1079	20.5	21.0	8.2	chr10	12063314	12063727	(121733695)	C	LTR21A	LTR/ERV1	(0)	481	1	388067
2123	10.5	2.3	2.3	chr10	12063728	12063856	(121733566)	+	AluJb	SINE/Alu	178	308	(4)	388066
15	9.7	0.0	0.0	chr10	12063907	12063928	(121733494)	+	(TG)n	Simple_repeat	1	22	(0)	388068
16	0.0	0.0	0.0	chr10	12063935	12063951	(121733471)	+	(AT)n	Simple_repeat	1	17	(0)	388069
1963	15.7	0.0	0.7	chr10	12063952	12064245	(121733177)	C	AluJr	SINE/Alu	(20)	292	1	388070
24	17.7	1.2	8.3	chr10	12349458	12349540	(121447882)	+	GA-rich	Low_complexity	1	84	(0)	388745
14	4.9	0.0	0.0	chr10	12349652	12349672	(121447750)	+	(GCG)n	Simple_repeat	1	21	(0)	388746
14	14.7	0.0	3.1	chr10	13100170	13100201	(120697221)	+	(GCC)n	Simple_repeat	1	32	(0)	390109
17	18.2	0.0	0.0	chr10	13101387	13101417	(120696005)	+	(C)n	Simple_repeat	1	31	(0)	390110
18	8.5	2.3	6.8	chr10	13347639	13347681	(120449741)	+	(GCC)n	Simple_repeat	1	44	(0)	390593
19	13.7	0.0	4.5	chr10	13347728	13347771	(120449651)	+	(CCTC)n	Simple_repeat	1	44	(0)	390594
17	12.9	0.0	2.8	chr10	13347772	13347807	(120449615)	+	(CGGCGG)n	Simple_repeat	1	36	(0)	390595
12	10.7	6.7	0.0	chr10	14879619	14879648	(118917774)	+	G-rich	Low_complexity	1	32	(0)	393217
18	8.5	0.0	0.0	chr10	15444858	15444882	(118352540)	+	(CA)n	Simple_repeat	1	25	(0)	394277
181	26.9	5.5	3.7	chr10	15803675	15803728	(117993694)	C	L2c	LINE/L2	(69)	3318	3264	394831
1658	30.2	4.5	1.7	chr10	17051424	17052474	(116744948)	+	L1ME2	LINE/L1	894	1981	(4434)	396740
5288	12.7	2.6	1.0	chr10	17202371	17203242	(116594180)	C	MER4D1	LTR/ERV1	(0)	900	15	396961
12	22.1	0.0	0.0	chr10	17229093	17229124	(116568298)	+	(GGCCCA)n	Simple_repeat	1	32	(0)	397005
562	23.0	10.7	5.3	chr10	17606505	17606803	(116190619)	+	Charlie7	DNA/hAT-Charlie	323	639	(1973)	397722
476	21.4	6.0	1.6	chr10	17606824	17606951	(116190471)	C	MIR	SINE/MIR	(20)	242	109	397723
252	25.3	0.0	4.4	chr10	17607071	17607161	(116190261)	+	Charlie7	DNA/hAT-Charlie	2525	2611	(1)	397724
234	31.4	6.8	3.9	chr10	17607167	17607295	(116190127)	C	MIR3	SINE/MIR	(73)	135	3	397725
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
14	18.2	0.0	4.9	chr10	21520459	21520499	(112276923)	+	(CCCTCC)n	Simple_repeat	1	41	(0)	403864
17	0.0	0.0	0.0	chr10	21520647	21520665	(112276757)	+	(CT)n	Simple_repeat	1	19	(0)	403865
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
18	13.2	0.0	0.0	chr10	21526217	21526249	(112271173)	+	(GGGAG)n	Simple_repeat	1	33	(0)	403872
29	18.2	2.9	1.4	chr10	21534386	21534455	(112262967)	+	GA-rich	Low_complexity	1	72	(0)	403879
20	26.9	3.2	3.1	chr10	21534817	21534910	(112262512)	+	(CCGCCG)n	Simple_repeat	1	97	(0)	403880
14	24.9	3.9	0.0	chr10	22320919	22320970	(111476452)	+	G-rich	Low_complexity	1	54	(0)	405115
16	18.9	0.0	0.0	chr10	22321042	22321071	(111476351)	+	G-rich	Low_complexity	1	30	(0)	405116
18	6.3	6.1	0.0	chr10	22321136	22321168	(111476254)	+	(CCCTC)n	Simple_repeat	1	35	(0)	405117
17	25.6	4.2	1.4	chr10	22321169	22321203	(111476219)	+	(CCGC)n	Simple_repeat	4	74	(0)	405118
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
478	29.5	7.8	2.9	chr10	22616325	22616495	(111180927)	C	MIRb	SINE/MIR	(34)	234	55	405517
12	24.6	3.6	3.5	chr10	22713358	22713413	(111084009)	+	(CCGC)n	Simple_repeat	1	58	(0)	405676
833	20.2	1.2	0.0	chr10	22817173	22817340	(110980082)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	205	405853
16	13.7	0.0	0.0	chr10	22817342	22817366	(110980056)	+	(AG)n	Simple_repeat	1	25	(0)	405854
593	19.9	0.0	3.0	chr10	22817376	22817530	(110979892)	C	FLAM_C	SINE/Alu	(90)	212	12	405855
304	23.0	4.2	3.4	chr10	22817515	22817631	(110979791)	C	MLT1B	LTR/ERVL-MaLR	(213)	177	60	405853
2312	10.5	0.0	0.0	chr10	22817689	22817983	(110979439)	C	AluSc	SINE/Alu	(14)	295	1	405856
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
13	20.3	0.0	0.0	chr10	24625051	24625080	(109172342)	+	GA-rich	Low_complexity	1	30	(0)	408765
25	15.9	0.0	0.0	chr10	24625282	24625323	(109172099)	+	A-rich	Low_complexity	1	42	(0)	408766
16	3.5	3.0	5.9	chr10	24723960	24723992	(109073430)	+	(CCTCC)n	Simple_repeat	1	34	(0)	408956
19	16.9	0.0	5.8	chr10	28533488	28533539	(105263883)	+	(CCG)n	Simple_repeat	1	52	(0)	415307
16	3.4	10.0	0.0	chr10	28533647	28533676	(105263746)	+	(GGC)n	Simple_repeat	1	33	(0)	415308
16	25.3	3.6	0.0	chr10	28533754	28533809	(105263613)	+	(GCGG)n	Simple_repeat	1	58	(0)	415309
2428	7.8	0.3	0.0	chr10	28621881	28622176	(105175246)	C	AluSp	SINE/Alu	(16)	297	1	415443
21	10.8	0.0	0.0	chr10	28622415	28622444	(105174978)	+	(C)n	Simple_repeat	1	30	(0)	415444
209	16.9	0.0	2.2	chr10	28878479	28878537	(104918885)	C	L2c	LINE/L2	(1)	3425	3345	415913
518	25.8	6.6	7.0	chr10	28991998	28992210	(104805212)	C	L2c	LINE/L2	(0)	3387	3176	416095
20	0.0	0.0	0.0	chr10	30349280	30349301	(103448121)	+	(A)n	Simple_repeat	1	22	(0)	418534
2053	10.9	1.3	1.0	chr10	30432542	30432843	(103364579)	C	AluJr4	SINE/Alu	(3)	309	7	418704
36	0.0	0.0	0.0	chr10	30432979	30433009	(103364413)	+	(GA)n	Simple_repeat	1	31	(0)	418705
3837	10.2	0.2	0.9	chr10	30483529	30484061	(103313361)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	418790
1027	30.6	2.2	4.3	chr10	30484151	30484288	(103313134)	+	Zaphod3	DNA/hAT-Tip100	811	941	(1682)	418791
601	21.1	4.5	3.8	chr10	30585963	30586095	(103211327)	+	MER20	DNA/hAT-Charlie	50	183	(36)	419040
607	17.8	1.0	0.0	chr10	30586506	30586606	(103210816)	C	MSTD	LTR/ERVL-MaLR	(49)	347	246	419041
1288	7.3	0.0	0.6	chr10	30586609	30586774	(103210648)	C	MER41-int	LTR/ERV1	(944)	5002	4838	419042
911	18.1	2.3	2.3	chr10	30586786	30586960	(103210462)	C	LTR9	LTR/ERV1	(0)	612	438	419043
190	29.2	16.8	0.0	chr10	30783776	30783864	(103013558)	C	MamTip2	DNA/hAT-Tip100	(81)	224	118	419358
1941	17.2	0.0	1.3	chr10	30820901	30821214	(102976208)	C	AluJr	SINE/Alu	(2)	310	1	419422
26	10.1	1.6	6.5	chr10	31319141	31319201	(102478221)	+	G-rich	Low_complexity	1	62	(0)	420164
18	17.8	2.2	2.1	chr10	31319443	31319488	(102477934)	+	(CCG)n	Simple_repeat	1	47	(0)	420165
23	9.7	0.0	0.0	chr10	32055519	32055551	(101741871)	+	(CA)n	Simple_repeat	1	33	(0)	421234
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
19	12.1	0.0	0.0	chr10	33330396	33330423	(100466999)	+	(A)n	Simple_repeat	1	28	(0)	423100
251	38.0	11.2	1.7	chr10	34163314	34163546	(99633876)	C	L2c	LINE/L2	(214)	3173	2916	424360
2417	6.5	1.4	0.7	chr10	42366664	42366957	(91430465)	+	AluSx1	SINE/Alu	1	296	(16)	431996
2311	16.2	1.0	6.8	chr10	42366958	42367072	(91430350)	+	MER57E3	LTR/ERV1	339	440	(47)	431995
2131	6.9	0.0	7.8	chr10	42367073	42367416	(91430006)	C	AluY	SINE/Alu	(0)	311	1	431997
2311	16.2	1.0	6.8	chr10	42367417	42367470	(91429952)	+	MER57E3	LTR/ERV1	441	479	(8)	431995
12	12.1	0.0	11.1	chr10	42639032	42639076	(91158346)	+	A-rich	Low_complexity	1	45	(0)	432329
2907	7.9	11.5	0.0	chr10	42768848	42769277	(91028145)	+	LTR19A	LTR/ERV1	1	486	(0)	432524
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
305	20.0	4.5	4.5	chr10	43397593	43397681	(90399741)	+	L1MC5	LINE/L1	7444	7532	(1772)	433411
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
4627	10.8	1.1	0.2	chr10	45410801	45411428	(88385994)	C	MER41B	LTR/ERV1	(0)	634	1	436025
37	0.0	2.6	0.0	chr10	45594600	45594637	(88202785)	+	(CCCAG)n	Simple_repeat	1	39	(0)	436271
14	8.1	0.0	6.7	chr10	45594704	45594733	(88202689)	+	(GGC)n	Simple_repeat	1	30	(0)	436272
2277	10.5	0.0	0.0	chr10	45675173	45675468	(88121954)	+	AluSg	SINE/Alu	1	296	(14)	436416
832	20.4	0.6	6.2	chr10	45675469	45675630	(88121792)	C	MER58A	DNA/hAT-Charlie	(31)	193	39	436415
425	24.3	4.5	8.2	chr10	45675657	45675694	(88121728)	+	L1M3	LINE/L1	4972	5009	(1131)	436417
2292	11.3	0.0	0.0	chr10	45675695	45675996	(88121426)	+	AluSg	SINE/Alu	1	302	(8)	436418
31	20.8	0.0	0.0	chr10	46597375	46597435	(87199987)	+	(C)n	Simple_repeat	1	61	(0)	437926
229	30.4	2.8	1.4	chr10	46597470	46597539	(87199883)	C	MIRb	SINE/MIR	(140)	128	58	437927
26	28.9	2.5	3.2	chr10	46597721	46597760	(87199662)	+	(CCTC)n	Simple_repeat	1	121	(0)	437928
14	29.1	1.3	5.1	chr10	46597761	46597838	(87199584)	+	(CCTCC)n	Simple_repeat	1	79	(0)	437929
752	20.4	0.8	0.8	chr10	46803119	46803250	(86994172)	C	FLAM_A	SINE/Alu	(10)	132	1	438285
34	3.0	0.0	0.0	chr10	46803339	46803372	(86994050)	+	(GT)n	Simple_repeat	1	34	(0)	438286
1232	25.6	8.1	6.5	chr10	46803390	46803765	(86993657)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	140	438287
630	22.7	9.2	2.1	chr10	47384905	47385292	(86412130)	+	L1M5	LINE/L1	5117	5536	(706)	439115
18	41.9	0.0	2.0	chr10	48462124	48462225	(85335197)	+	(TG)n	Simple_repeat	1	102	(0)	440567
376	25.9	2.3	13.6	chr10	48462299	48462536	(85334886)	C	MIR	SINE/MIR	(29)	239	33	440568
338	31.6	7.3	1.3	chr10	48469889	48470042	(85327380)	+	MIR	SINE/MIR	23	186	(76)	440581
1607	20.6	4.9	0.0	chr10	48506186	48506515	(85290907)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	1	440633
193	22.1	6.8	2.9	chr10	48506804	48506873	(85290549)	C	MIRb	SINE/MIR	(68)	200	128	440634
21	4.1	0.0	0.0	chr10	48656266	48656290	(85141132)	+	(G)n	Simple_repeat	1	25	(0)	440835
3940	13.8	2.5	11.2	chr10	49550639	49551226	(84246196)	C	LTR8	LTR/ERV1	(166)	525	1	442003
373	26.6	7.2	5.9	chr10	50063037	50063188	(83734234)	+	Charlie4z	DNA/hAT-Charlie	1	154	(13)	442801
353	26.1	3.0	1.1	chr10	50331210	50331323	(83466099)	C	MIRb	SINE/MIR	(43)	225	107	443196
518	32.8	6.3	7.6	chr10	50331625	50331688	(83465734)	+	L2b	LINE/L2	2706	2765	(654)	443197
1334	15.1	17.7	2.6	chr10	50331689	50331994	(83465428)	+	MLT1A0	LTR/ERVL-MaLR	1	362	(3)	443198
16	9.1	2.6	5.0	chr10	50623872	50623910	(83173512)	+	(CCCGCCG)n	Simple_repeat	1	40	(0)	443660
271	29.3	2.5	3.3	chr10	59265116	59265235	(74532187)	+	MamRep564	Unknown	111	229	(128)	455300
270	32.3	9.9	5.6	chr10	59885563	59885831	(73911591)	+	L2c	LINE/L2	2916	3197	(190)	456242
383	24.1	3.6	0.9	chr10	60355074	60355182	(73442240)	+	L1ME4a	LINE/L1	5961	6072	(52)	456953
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
12	16.4	2.8	2.7	chr10	63630510	63630545	(70166877)	+	(CGCCCC)n	Simple_repeat	1	37	(0)	462128
12	31.5	1.8	0.0	chr10	63630576	63630630	(70166792)	+	G-rich	Low_complexity	1	56	(0)	462129
9765	14.7	1.0	4.0	chr10	63986198	63987865	(69809557)	+	MER50-int	LTR/ERV1	1	1732	(5473)	462724
1285	19.4	2.7	11.1	chr10	63987864	63988187	(69809235)	+	MER50-int	LTR/ERV1	1555	1850	(5355)	462725
18	4.7	0.0	0.0	chr10	68075419	68075440	(65721982)	+	(G)n	Simple_repeat	1	22	(0)	468461
11	31.8	1.7	1.6	chr10	68560750	68560809	(65236613)	+	G-rich	Low_complexity	1	61	(0)	469547
20	4.3	0.0	0.0	chr10	69242427	69242450	(64554972)	+	(A)n	Simple_repeat	1	24	(0)	471177
523	19.6	10.0	6.1	chr10	69242463	69242625	(64554797)	C	L1MB8	LINE/L1	(6)	6172	6003	471178
259	30.8	5.8	0.8	chr10	69315807	69315937	(64481485)	+	MIRc	SINE/MIR	12	149	(119)	471353
299	32.4	9.7	4.2	chr10	69316188	69316548	(64480874)	C	L2	LINE/L2	(459)	2960	2578	471354
2567	6.5	0.0	0.3	chr10	69325045	69325350	(64472072)	C	AluY	SINE/Alu	(6)	305	1	471368
1215	13.9	0.0	0.0	chr10	69325356	69325521	(64471901)	C	AluSg4	SINE/Alu	(10)	300	135	471369
1984	12.9	0.0	3.6	chr10	69325527	69325828	(64471594)	C	AluSx1	SINE/Alu	(13)	299	9	471370
2251	11.6	0.0	0.0	chr10	69325841	69326133	(64471289)	C	AluSx3	SINE/Alu	(18)	293	1	471371
197	13.7	10.5	5.6	chr10	69461633	69461686	(64335736)	C	L2b	LINE/L2	(18)	3357	3301	471661
245	11.4	0.0	0.0	chr10	69461930	69461964	(64335458)	C	MER5A	DNA/hAT-Charlie	(68)	121	87	471662
1605	18.3	3.9	0.0	chr10	69462007	69462155	(64335267)	C	AluJb	SINE/Alu	(32)	280	126	471663
224	34.0	12.6	0.9	chr10	70169947	70170157	(63627265)	+	MIRc	SINE/MIR	26	264	(4)	472878
275	11.6	2.3	0.0	chr10	70232747	70232789	(63564633)	+	MIR3	SINE/MIR	113	156	(52)	473005
1536	23.6	6.0	1.5	chr10	70528722	70529117	(63268305)	C	MLT1J	LTR/ERVL-MaLR	(97)	415	1	473663
16	0.0	0.0	0.0	chr10	70529209	70529226	(63268196)	+	(C)n	Simple_repeat	1	18	(0)	473664
13	12.0	0.0	3.5	chr10	70529393	70529421	(63268001)	+	(TCCC)n	Simple_repeat	1	29	(0)	473665
303	29.8	6.9	9.3	chr10	70529590	70529826	(63267596)	+	L2c	LINE/L2	3099	3336	(51)	473666
3229	19.9	3.4	2.5	chr10	70575722	70576429	(63220993)	C	MER72	LTR/ERV1	(0)	722	9	473743
471	26.1	3.2	0.0	chr10	70576435	70576553	(63220869)	+	LTR16B1	LTR/ERVL	309	431	(49)	473742
765	30.9	9.5	4.4	chr10	70683606	70683937	(63113485)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	184	473948
2501	15.2	4.7	0.7	chr10	70683938	70684348	(63113074)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	473949
765	30.9	9.5	4.4	chr10	70684349	70684533	(63112889)	C	MLT1H	LTR/ERVL-MaLR	(366)	183	1	473948
450	21.9	10.9	0.0	chr10	70684535	70684657	(63112765)	+	MIRb	SINE/MIR	93	230	(38)	473950
23	19.7	3.4	0.0	chr10	70759314	70759372	(63038050)	+	(TCTC)n	Simple_repeat	1	61	(0)	474076
606	25.4	9.4	0.0	chr10	70759480	70759672	(63037750)	C	MIRb	SINE/MIR	(18)	250	38	474077
271	28.1	12.3	0.8	chr10	71269368	71269496	(62527926)	+	MIR3	SINE/MIR	33	178	(30)	474908
557	30.2	5.8	10.0	chr10	71269657	71270067	(62527355)	C	L2a	LINE/L2	(79)	3347	2941	474909
2031	10.4	3.2	0.0	chr10	71270068	71270336	(62527086)	+	AluSx	SINE/Alu	1	278	(34)	474910
53	3.6	0.0	0.0	chr10	71270341	71270397	(62527025)	+	(AGGG)n	Simple_repeat	1	57	(0)	474911
344	32.1	13.3	3.3	chr10	71270398	71270765	(62526657)	C	L2a	LINE/L2	(483)	2936	2536	474909
14	18.1	0.0	7.8	chr10	71314514	71314564	(62482858)	+	(CCGCC)n	Simple_repeat	1	51	(0)	474984
13	24.9	1.0	3.1	chr10	71319183	71319233	(62478189)	+	G-rich	Low_complexity	1	49	(0)	474994
12	16.5	5.9	0.0	chr10	71319274	71319307	(62478115)	+	(GCG)n	Simple_repeat	1	36	(0)	474995
27	20.4	0.0	2.8	chr10	71878567	71878637	(61918785)	+	G-rich	Low_complexity	1	71	(0)	476081
204	29.3	0.0	0.0	chr10	71878852	71878909	(61918513)	C	L2c	LINE/L2	(35)	3352	3295	476082
467	24.3	6.7	1.4	chr10	71978551	71978692	(61818730)	C	MIR	SINE/MIR	(0)	262	113	476279
29	11.8	1.7	3.3	chr10	71978997	71979055	(61818367)	+	(TTCC)n	Simple_repeat	1	60	(0)	476280
258	26.8	4.5	0.5	chr10	71979151	71979318	(61818104)	+	MIRb	SINE/MIR	11	185	(23)	476281
17	10.7	4.5	4.3	chr10	72260962	72261005	(61536417)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	476891
317	17.0	13.8	4.3	chr10	72266262	72266378	(61531044)	+	MER5A	DNA/hAT-Charlie	34	163	(26)	476904
2274	11.3	0.0	0.0	chr10	72266379	72266671	(61530751)	C	AluSg	SINE/Alu	(17)	293	1	476905
215	20.5	6.1	0.8	chr10	72266705	72266771	(61530651)	+	MIRc	SINE/MIR	75	149	(81)	476906
2536	6.0	0.3	0.3	chr10	72266810	72267110	(61530312)	C	AluSp	SINE/Alu	(12)	301	1	476907
234	34.8	4.2	1.9	chr10	72321118	72321278	(61476144)	+	MIRb	SINE/MIR	36	200	(68)	477046
570	28.6	3.9	3.4	chr10	72321530	72321726	(61475696)	+	MIRb	SINE/MIR	48	239	(23)	477047
16	9.5	5.9	0.0	chr10	72321731	72321766	(61475656)	+	(CCTCTC)n	Simple_repeat	1	38	(0)	477048
223	31.1	0.0	1.3	chr10	72355122	72355196	(61442226)	C	MIR3	SINE/MIR	(33)	175	102	477094
415	22.5	8.5	6.2	chr10	73094361	73094521	(60702901)	+	Charlie4z	DNA/hAT-Charlie	2	166	(1)	478597
738	13.1	6.2	7.4	chr10	73245285	73245432	(60551990)	+	MER1B	DNA/hAT-Charlie	193	338	(1)	478917
18	8.7	0.0	0.0	chr10	73245451	73245475	(60551947)	+	(A)n	Simple_repeat	1	25	(0)	478918
2886	16.5	8.4	0.0	chr10	73366623	73367168	(60430254)	C	LTR31	LTR/ERV1	(15)	604	9	479163
524	15.2	0.0	10.0	chr10	73367227	73367300	(60430122)	+	L1MB7	LINE/L1	5534	5607	(577)	479162
2144	11.5	0.3	4.9	chr10	73367301	73367605	(60429817)	+	AluSx	SINE/Alu	1	291	(21)	479164
1800	12.1	2.2	0.4	chr10	73529171	73529443	(60267979)	+	L1PA13	LINE/L1	5865	6142	(21)	479459
16	16.4	11.4	1.3	chr10	73785769	73785838	(60011584)	+	(CCCTCGG)n	Simple_repeat	1	78	(0)	479943
32	3.2	0.0	0.0	chr10	73786315	73786346	(60011076)	+	(TG)n	Simple_repeat	1	32	(0)	479944
17	5.0	0.0	0.0	chr10	73786347	73786367	(60011055)	+	(CG)n	Simple_repeat	1	21	(0)	479945
264	22.6	20.1	0.0	chr10	73815494	73815608	(59981814)	C	MIRb	SINE/MIR	(39)	229	86	479974
19	22.3	5.7	1.4	chr10	73873725	73873794	(59923628)	+	(GGCGG)n	Simple_repeat	1	74	(0)	480059
13	18.6	3.7	5.4	chr10	73873907	73873960	(59923462)	+	G-rich	Low_complexity	1	56	(0)	480060
12	9.2	0.0	4.0	chr10	73874462	73874486	(59922936)	+	(GCGG)n	Simple_repeat	1	25	(0)	480061
37	21.8	4.0	3.1	chr10	73874612	73874736	(59922686)	+	(CCCCG)n	Simple_repeat	1	130	(0)	480062
212	32.6	4.5	2.3	chr10	73957422	73957509	(59839913)	C	UCON132b	DNA/hAT-Tip100	(42)	106	17	480254
2588	5.9	0.0	0.3	chr10	74009255	74009557	(59787865)	C	AluY	SINE/Alu	(8)	303	2	480383
2052	11.6	3.5	0.0	chr10	74009632	74009907	(59787515)	C	AluSz	SINE/Alu	(26)	286	1	480384
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
24	31.9	1.0	1.9	chr10	74826673	74826776	(58970646)	+	(GGC)n	Simple_repeat	1	105	(0)	481944
511	23.4	11.2	0.0	chr10	75109355	75109498	(58687924)	+	MIRb	SINE/MIR	89	251	(17)	482439
215	24.5	2.0	0.0	chr10	75109470	75109518	(58687904)	+	L2b	LINE/L2	3326	3375	(0)	482440
2096	14.5	0.3	0.0	chr10	75109814	75110116	(58687306)	C	AluSz6	SINE/Alu	(8)	304	1	482441
571	27.8	12.6	2.6	chr10	75772366	75772594	(58024828)	C	Tigger18a	DNA/TcMar-Tigger	(510)	342	88	483575
1095	18.7	5.3	0.5	chr10	75773072	75773270	(58024152)	C	MER20	DNA/hAT-Charlie	(10)	209	1	483576
1235	23.2	13.1	3.3	chr10	77971356	77971810	(55825612)	+	MLT1J	LTR/ERVL-MaLR	4	509	(3)	486935
261	25.0	5.0	15.0	chr10	77971815	77971927	(55825495)	C	MamGypLTR3a	LTR/Gypsy	(807)	174	74	486936
1181	13.9	7.7	1.0	chr10	77971940	77972133	(55825289)	C	AluJb	SINE/Alu	(19)	293	86	486937
610	31.6	3.1	7.4	chr10	78972026	78972295	(54825127)	C	MIRb	SINE/MIR	(10)	258	1	488800
13	20.8	4.3	2.1	chr10	79068124	79068169	(54729253)	+	(CCGCG)n	Simple_repeat	1	48	(0)	488997
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
14	7.8	0.0	6.5	chr10	79069140	79069170	(54728252)	+	(CGGAG)n	Simple_repeat	1	31	(0)	489001
16	17.2	2.4	2.4	chr10	79069217	79069257	(54728165)	+	(CGG)n	Simple_repeat	1	42	(0)	489002
48	0.0	0.0	0.0	chr10	79093136	79093176	(54704246)	+	(AC)n	Simple_repeat	1	41	(0)	489040
431	29.8	8.5	8.1	chr10	79093203	79093284	(54704138)	C	MIRb	SINE/MIR	(42)	226	156	489041
62	0.0	0.0	1.7	chr10	79093285	79093344	(54704078)	+	(TTTA)n	Simple_repeat	1	60	(0)	489042
2206	9.9	0.3	0.0	chr10	79093345	79093626	(54703796)	C	AluSx1	SINE/Alu	(29)	283	1	489043
79	4.9	0.0	0.0	chr10	79114457	79114541	(54682881)	+	(GT)n	Simple_repeat	1	85	(0)	489081
14	11.2	3.5	0.0	chr10	79114544	79114578	(54682844)	+	(GGAG)n	Simple_repeat	1	36	(0)	489082
366	28.5	13.1	2.9	chr10	79150489	79150671	(54646751)	+	MIR3	SINE/MIR	1	206	(62)	489148
222	20.7	8.4	4.0	chr10	79347828	79347922	(54449500)	+	MIR3	SINE/MIR	81	175	(93)	489470
519	31.4	3.6	3.9	chr10	79375210	79375435	(54421987)	C	MIRb	SINE/MIR	(3)	259	22	489510
250	27.0	5.9	8.3	chr10	79391017	79391137	(54406285)	+	MIR3	SINE/MIR	15	132	(76)	489530
180	30.4	8.2	0.0	chr10	79391125	79391180	(54406242)	+	L2c	LINE/L2	3325	3385	(2)	489531
20	9.4	3.9	5.7	chr10	79445563	79445613	(54351809)	+	(CCGCTG)n	Simple_repeat	1	53	(0)	489639
16	15.3	6.8	0.0	chr10	79445685	79445728	(54351694)	+	(GCCCC)n	Simple_repeat	1	47	(0)	489640
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
2421	9.9	0.3	0.0	chr10	80202764	80203065	(53594357)	+	AluSx	SINE/Alu	1	303	(9)	490858
12	23.9	0.0	2.4	chr10	80205036	80205076	(53592346)	+	(CCCGAC)n	Simple_repeat	1	41	(0)	490862
423	25.2	3.0	3.8	chr10	80456730	80456780	(53340642)	C	MIR	SINE/MIR	(48)	214	161	491257
1587	19.7	0.0	2.3	chr10	80466256	80466560	(53330862)	C	AluJo	SINE/Alu	(14)	298	1	491268
1467	22.2	3.4	1.4	chr10	80466666	80467013	(53330409)	C	MER4D	LTR/ERV1	(0)	903	549	491269
1565	15.8	1.7	1.0	chr10	80467048	80467335	(53330087)	C	MER49	LTR/ERV1	(633)	290	1	491270
1216	18.7	2.3	0.0	chr10	80497350	80497558	(53299864)	+	MER58A	DNA/hAT-Charlie	11	224	(0)	491315
191	26.3	13.2	2.0	chr10	80497913	80498013	(53299409)	+	MIR3	SINE/MIR	79	192	(16)	491316
2575	6.8	0.0	0.0	chr10	86939183	86939491	(46857931)	+	AluSg	SINE/Alu	2	310	(0)	500445
65	1.7	0.0	0.0	chr10	86939807	86939866	(46857556)	+	(GT)n	Simple_repeat	1	60	(0)	500446
1107	13.2	0.0	0.0	chr10	86939867	86940017	(46857405)	C	AluSx1	SINE/Alu	(28)	284	134	500447
24	22.0	3.1	1.5	chr10	87095016	87095080	(46702342)	+	(GC)n	Simple_repeat	1	67	(0)	500703
48	22.5	0.0	0.0	chr10	87095085	87095192	(46702230)	+	G-rich	Low_complexity	1	108	(0)	500704
16	12.8	2.8	2.7	chr10	89645039	89645074	(44152348)	+	(CTC)n	Simple_repeat	1	37	(0)	504723
4409	13.0	2.8	0.3	chr10	91796574	91797282	(42000140)	C	Tigger1	DNA/TcMar-Tigger	(1493)	925	199	507862
371	31.4	4.2	6.3	chr10	92590436	92590704	(41206718)	C	L2a	LINE/L2	(489)	2930	2668	509463
181	26.9	1.9	0.0	chr10	92590807	92590858	(41206564)	C	L2a	LINE/L2	(978)	2441	2389	509463
3524	7.4	5.1	0.2	chr10	92591083	92591570	(41205852)	+	LTR10D	LTR/ERV1	1	513	(0)	509465
16	17.8	2.1	4.1	chr10	92689765	92689812	(41107610)	+	G-rich	Low_complexity	1	49	(0)	509676
13	24.7	5.7	2.7	chr10	92689910	92689979	(41107443)	+	(GGAGCGC)n	Simple_repeat	1	74	(0)	509677
8052	17.3	7.2	4.1	chr10	92856164	92857783	(40939639)	C	L1M4b	LINE/L1	(2969)	4031	2363	510034
26	5.5	2.6	0.0	chr10	92857784	92857821	(40939601)	+	(TGTGTGTC)n	Simple_repeat	1	39	(0)	510037
8052	16.5	8.8	6.3	chr10	92857822	92858762	(40938660)	C	L1M4b	LINE/L1	(4505)	2362	1435	510034
515	29.5	14.8	2.7	chr10	93071064	93071429	(40725993)	C	L2a	LINE/L2	(49)	3377	2960	510394
22	10.5	0.0	0.0	chr10	93071484	93071514	(40725908)	+	(A)n	Simple_repeat	1	31	(0)	510395
12	13.7	6.2	0.0	chr10	93071593	93071624	(40725798)	+	(ACCC)n	Simple_repeat	1	34	(0)	510396
3825	17.2	6.8	3.8	chr10	96124232	96125093	(37672329)	C	L1M4c	LINE/L1	(5493)	2074	1186	515430
22	24.1	1.4	2.7	chr10	96832658	96832729	(36964693)	+	(CCTCCC)n	Simple_repeat	1	73	(0)	516803
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
11	16.5	5.9	0.0	chr10	96832966	96832999	(36964423)	+	(GAGGTG)n	Simple_repeat	1	36	(0)	516805
1590	13.7	3.6	7.0	chr10	97335203	97335515	(36461907)	C	AluJo	SINE/Alu	(10)	302	1	517744
369	24.6	13.6	0.9	chr10	98447044	98447158	(35350264)	C	MIR3	SINE/MIR	(62)	146	15	519934
236	24.6	11.0	7.6	chr10	98447318	98447475	(35349947)	+	MamRep1879	DNA/hAT-Tip100?	46	209	(7)	519935
21	20.9	1.6	3.1	chr10	100969452	100969515	(32827907)	+	(CCCCGC)n	Simple_repeat	1	65	(0)	524273
2127	12.2	0.3	2.8	chr10	101041499	101041818	(32755604)	C	AluJb	SINE/Alu	(0)	312	1	524367
19	27.1	4.0	0.0	chr10	101062594	101062669	(32734753)	+	(GCTGCC)n	Simple_repeat	1	79	(0)	524410
695	26.3	5.3	2.2	chr10	102112171	102112409	(31685013)	C	MIRc	SINE/MIR	(26)	242	2	526315
20	18.1	3.3	3.2	chr10	102120184	102120243	(31677179)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	526329
15	19.6	5.6	1.8	chr10	102133972	102134025	(31663397)	+	(GCTGAGG)n	Simple_repeat	1	57	(0)	526367
16	5.2	0.0	0.0	chr10	102395099	102395118	(31402304)	+	(G)n	Simple_repeat	1	20	(0)	526853
12	15.3	3.5	0.0	chr10	102642298	102642326	(31155096)	+	(CGCCC)n	Simple_repeat	1	30	(0)	527306
18	22.0	0.0	0.0	chr10	102643329	102643365	(31154057)	+	A-rich	Low_complexity	1	37	(0)	527307
20	18.0	0.0	5.4	chr10	102643549	102643604	(31153818)	+	G-rich	Low_complexity	1	56	(0)	527308
454	15.9	0.0	2.2	chr10	102645596	102645685	(31151737)	+	UCON4	Unknown	66	153	(150)	527310
26	14.1	8.6	0.0	chr10	102918607	102918676	(30878746)	+	(GCGGCT)n	Simple_repeat	1	76	(0)	527859
15	13.9	0.0	0.0	chr10	103394740	103394763	(30402659)	+	(C)n	Simple_repeat	1	24	(0)	528886
3071	14.2	7.9	4.9	chr10	104252957	104253548	(29543874)	C	LTR36	LTR/ERV1	(0)	611	1	530420
14	30.7	0.0	0.0	chr10	110008207	110008254	(23789168)	+	(GGC)n	Simple_repeat	1	48	(0)	538775
16	0.0	0.0	0.0	chr10	110211074	110211090	(23586332)	+	(T)n	Simple_repeat	1	17	(0)	539109
537	28.7	12.8	7.9	chr10	110569404	110569483	(23227939)	+	MIRb	SINE/MIR	1	82	(148)	539792
1155	3.3	5.6	3.2	chr10	110569484	110569640	(23227782)	+	L1PA6	LINE/L1	5993	6153	(1)	539793
537	28.7	8.1	3.9	chr10	110569641	110569762	(23227660)	+	MIRb	SINE/MIR	77	209	(59)	539792
13	6.3	8.1	5.0	chr10	112951024	112951060	(20846362)	+	(CGG)n	Simple_repeat	1	40	(0)	543550
35	20.3	3.8	5.2	chr10	112951615	112951748	(20845674)	+	(CCGCC)n	Simple_repeat	1	132	(0)	543551
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
299	21.6	1.3	1.3	chr10	116682124	116682198	(17115224)	C	MIR	SINE/MIR	(78)	184	110	549171
321	7.5	0.0	0.0	chr10	116682213	116682252	(17115170)	+	AluSz6	SINE/Alu	238	277	(35)	549172
227	26.3	6.2	0.0	chr10	116682629	116682704	(17114718)	C	MIRc	SINE/MIR	(102)	166	86	549173
2230	4.0	0.0	5.0	chr10	116682706	116683002	(17114420)	C	AluYc	SINE/Alu	(17)	282	1	549174
18	25.7	0.0	0.0	chr10	123008737	123008784	(10788638)	+	(GCC)n	Simple_repeat	1	48	(0)	559613
17	18.0	6.0	0.0	chr10	123135570	123135619	(10661803)	+	(GAGGCG)n	Simple_repeat	1	53	(0)	559848
11	20.3	0.0	9.3	chr10	123135975	123136028	(10661394)	+	(CCGCCCG)n	Simple_repeat	1	54	(0)	559849
16	18.8	0.0	4.3	chr10	123136076	123136128	(10661294)	+	(CCGCCA)n	Simple_repeat	1	50	(0)	559850
29	26.3	1.0	3.0	chr10	123136170	123136269	(10661153)	+	(CCG)n	Simple_repeat	1	101	(0)	559851
25	21.5	3.2	4.2	chr10	125159399	125159491	(8637931)	+	(GCCCG)n	Simple_repeat	1	96	(0)	563044
15	16.1	0.0	0.0	chr10	125159487	125159515	(8637907)	+	(GCG)n	Simple_repeat	1	29	(0)	563045
24	13.3	1.9	3.7	chr10	125159894	125159946	(8637476)	+	(CCG)n	Simple_repeat	1	54	(0)	563046
15	5.6	0.0	0.0	chr10	125159955	125159973	(8637449)	+	(T)n	Simple_repeat	1	19	(0)	563047
1919	17.6	11.9	19.9	chr10	130157070	130157678	(3639744)	C	MLT2B3	LTR/ERVL	(0)	554	1	569194
508	32.8	4.4	6.7	chr10	130157679	130157821	(3639601)	+	MIRb	SINE/MIR	124	259	(9)	569193
850	24.4	15.9	0.0	chr10	131891119	131891541	(1905881)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	571044
338	28.8	2.3	0.8	chr10	132331499	132331624	(1465798)	C	LTR16E1	LTR/ERVL	(3)	535	408	571544
1559	8.0	3.6	0.8	chr10	132335099	132335338	(1462084)	C	LTR71B	LTR/ERV1	(2)	608	362	571547
643	9.1	0.0	1.0	chr10	132335335	132335434	(1461988)	C	LTR71B	LTR/ERV1	(150)	460	362	571548
593	11.1	0.0	4.8	chr10	132335431	132335534	(1461888)	C	LTR71B	LTR/ERV1	(150)	460	362	571548
624	7.9	0.0	4.7	chr10	132335531	132335636	(1461786)	C	LTR71B	LTR/ERV1	(150)	460	360	571548
3047	7.7	3.7	0.0	chr10	132335634	132336072	(1461350)	C	LTR71B	LTR/ERV1	(154)	456	1	571549
2470	4.3	0.0	0.0	chr10	132443348	132443628	(1353794)	+	AluY	SINE/Alu	1	281	(30)	571643
26	0.0	8.3	0.0	chr10	132443630	132443665	(1353757)	+	(AAAAT)n	Simple_repeat	1	39	(0)	571644
355	9.5	0.0	0.4	chr10	132654965	132655031	(1142391)	+	FLAM_C	SINE/Alu	1	51	(82)	571877
798	35.7	5.3	2.6	chr10	132989370	132990367	(807055)	C	L1ME2z	LINE/L1	(286)	6158	5119	572106
21	14.3	6.0	4.2	chr10	133247444	133247510	(549912)	+	(GCAGGT)n	Simple_repeat	1	71	(0)	572307
19	4.5	0.0	0.0	chr10	133316668	133316690	(480732)	+	(C)n	Simple_repeat	1	23	(0)	572371
19	4.3	0.0	0.0	chr10	133316690	133316713	(480709)	+	(CA)n	Simple_repeat	1	24	(0)	572372
4147	23.2	5.8	7.9	chr11	266465	266879	(134819743)	+	L1M5	LINE/L1	4376	4814	(1332)	573171
402	24.5	3.6	0.9	chr11	267122	267228	(134819394)	C	L2a	LINE/L2	(2)	3424	3315	573177
409	21.7	4.2	2.5	chr11	316661	316778	(134769844)	C	LTR8A	LTR/ERV1	(263)	464	345	573241
5461	8.8	2.2	3.8	chr11	316784	317577	(134769045)	C	MER4E1	LTR/ERV1	(0)	781	1	573242
493	26.0	2.7	6.7	chr11	327537	327730	(134758892)	+	MER33	DNA/hAT-Charlie	27	212	(112)	573253
1791	13.3	3.0	3.0	chr11	349106	349504	(134737118)	C	MER41-int	LTR/ERV1	(3974)	3842	3468	573310
393	6.1	6.8	0.0	chr11	349505	350170	(134736452)	+	(AC)n	Simple_repeat	1	711	(0)	573311
15	19.9	0.0	0.0	chr11	395147	395175	(134691447)	+	(GT)n	Simple_repeat	1	29	(0)	573353
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
1675	15.6	5.3	1.0	chr11	696497	696784	(134389838)	+	AluJr	SINE/Alu	1	301	(11)	573784
2173	8.5	0.3	6.6	chr11	696798	697114	(134389508)	+	AluSp	SINE/Alu	1	297	(16)	573785
978	12.6	0.0	0.0	chr11	697127	697261	(134389361)	+	AluJb	SINE/Alu	156	290	(22)	573786
12	17.9	6.5	2.0	chr11	728324	728369	(134358253)	+	G-rich	Low_complexity	1	49	(0)	573837
16	16.4	0.0	0.0	chr11	796292	796325	(134290297)	+	G-rich	Low_complexity	1	34	(0)	573956
15	0.0	5.3	10.0	chr11	798219	798256	(134288366)	+	(CGC)n	Simple_repeat	1	40	(0)	573957
12	25.6	3.4	3.3	chr11	798287	798345	(134288277)	+	(TCCGCCC)n	Simple_repeat	1	61	(0)	573958
16	11.7	0.0	0.0	chr11	810012	810039	(134276583)	+	(CCG)n	Simple_repeat	1	28	(0)	573972
2172	10.8	2.6	0.0	chr11	810512	810807	(134275815)	+	AluSx1	SINE/Alu	1	304	(8)	573973
30	0.0	0.0	3.0	chr11	832893	832925	(134253697)	+	(CGGGG)n	Simple_repeat	1	33	(0)	574001
18	13.3	0.0	0.0	chr11	832968	833000	(134253622)	+	(GCC)n	Simple_repeat	1	33	(0)	574002
12	16.0	0.0	3.3	chr11	833440	833469	(134253153)	+	(GGC)n	Simple_repeat	1	30	(0)	574003
14	16.4	2.9	0.0	chr11	842514	842547	(134244075)	+	(CGGCC)n	Simple_repeat	1	35	(0)	574012
13	9.9	2.6	7.7	chr11	842875	842912	(134243710)	+	(GCG)n	Simple_repeat	1	39	(0)	574013
18	16.2	4.0	1.9	chr11	843048	843097	(134243525)	+	G-rich	Low_complexity	1	52	(0)	574014
465	21.0	2.4	0.2	chr11	1512672	1512790	(133573832)	+	MSTD	LTR/ERVL-MaLR	1	129	(245)	574676
619	24.1	11.7	4.3	chr11	1512969	1513245	(133573377)	+	MSTD	LTR/ERVL-MaLR	63	393	(3)	574676
15	9.2	8.6	0.0	chr11	1572032	1572066	(133514556)	+	(CGTCGC)n	Simple_repeat	1	38	(0)	574743
36	0.0	0.0	0.0	chr11	1572177	1572209	(133514413)	+	(GGCTCG)n	Simple_repeat	1	33	(0)	574744
21	19.8	1.4	5.6	chr11	1572550	1572620	(133514002)	+	(CCCGGCC)n	Simple_repeat	1	72	(0)	574745
16	14.5	0.0	0.0	chr11	1744645	1744675	(133341947)	+	(GGAT)n	Simple_repeat	1	31	(0)	575038
229	28.6	17.3	0.0	chr11	1744787	1744877	(133341745)	C	MIRc	SINE/MIR	(128)	140	31	575039
23	27.1	0.0	1.7	chr11	1773094	1773182	(133313440)	+	G-rich	Low_complexity	1	87	(0)	575068
11	13.2	5.7	2.7	chr11	2700004	2700038	(132386584)	+	(CTGCCG)n	Simple_repeat	1	37	(0)	576063
14	13.7	3.1	0.0	chr11	2912984	2913015	(132173607)	+	G-rich	Low_complexity	1	33	(0)	576309
14	23.9	0.0	7.9	chr11	3165324	3165386	(131921236)	+	GA-rich	Low_complexity	1	63	(0)	576656
112	8.1	1.7	2.2	chr11	3216843	3217021	(131869601)	+	(TTCT)n	Simple_repeat	1	182	(0)	576734
59	4.8	0.0	0.0	chr11	3217022	3217085	(131869537)	+	(TC)n	Simple_repeat	1	64	(0)	576735
15	24.8	3.4	1.6	chr11	3217200	3217258	(131869364)	+	GA-rich	Low_complexity	1	61	(0)	576736
12	4.2	0.0	10.0	chr11	3840729	3840758	(131245864)	+	(CCCG)n	Simple_repeat	1	30	(0)	577809
15	27.9	0.0	9.7	chr11	3840910	3841023	(131245599)	+	G-rich	Low_complexity	1	114	(0)	577810
21	10.2	4.8	0.0	chr11	3840983	3841024	(131245598)	+	(GGGCG)n	Simple_repeat	1	44	(0)	577811
7906	13.4	3.2	1.2	chr11	5258019	5261292	(129825330)	+	L1PA7	LINE/L1	251	3642	(3220)	579797
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
236	34.8	10.2	1.7	chr11	6618535	6618651	(128467971)	C	MIRb	SINE/MIR	(139)	129	2	581583
1779	9.4	12.6	1.1	chr11	8700816	8701081	(126385541)	C	AluSc	SINE/Alu	(3)	306	6	584362
4001	11.3	3.7	5.0	chr11	8701082	8701663	(126384959)	+	LTR9B	LTR/ERV1	68	644	(0)	584361
4442	25.5	11.2	10.4	chr11	9061621	9062961	(126023661)	+	HAL1	LINE/L1	10	1277	(1230)	584950
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
18	19.1	3.5	3.4	chr11	10294071	10294127	(124792495)	+	(GCC)n	Simple_repeat	1	59	(0)	587321
22	13.3	2.4	0.0	chr11	10308044	10308085	(124778537)	+	A-rich	Low_complexity	1	43	(0)	587344
21	27.0	2.1	4.2	chr11	10308292	10308384	(124778238)	+	(CTTC)n	Simple_repeat	1	95	(0)	587345
278	28.0	3.2	11.2	chr11	10695121	10695289	(124391333)	C	MER5A1	DNA/hAT-Charlie	(0)	166	12	587949
604	29.6	2.3	1.2	chr11	11844398	11844568	(123242054)	C	MIR3	SINE/MIR	(6)	202	30	589844
27	13.7	3.7	6.0	chr11	12674441	12674521	(122412101)	+	(CGCCG)n	Simple_repeat	1	84	(0)	591160
15	17.7	6.7	0.0	chr11	12674718	12674770	(122411852)	+	G-rich	Low_complexity	1	56	(0)	591161
14	28.0	3.3	0.0	chr11	12674842	12674901	(122411721)	+	G-rich	Low_complexity	1	62	(0)	591162
497	26.7	5.7	0.6	chr11	12963982	12964147	(122122475)	+	MER45A	DNA/hAT-Tip100	4	178	(0)	591575
3039	15.8	6.3	0.6	chr11	12964496	12965035	(122121587)	C	MER6A	DNA/TcMar-Tigger	(0)	605	33	591576
466	31.1	10.2	1.6	chr11	14232593	14232850	(120853772)	+	L2	LINE/L2	1680	1962	(1457)	593523
843	24.6	25.9	1.7	chr11	14232980	14233501	(120853121)	+	L2	LINE/L2	2191	2882	(537)	593523
24	14.7	0.0	0.0	chr11	14499566	14499610	(120587012)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	594061
250	30.2	5.7	1.7	chr11	16857493	16857610	(118229012)	C	Plat_L3	LINE/CR1	(20)	3566	3444	597584
2199	10.6	0.0	0.0	chr11	16857699	16858018	(118228604)	C	AluSx1	SINE/Alu	(0)	312	1	597585
21	25.2	1.6	0.0	chr11	17209571	17209593	(117877029)	+	(TCTT)n	Simple_repeat	1	24	(0)	598289
53	0.0	8.7	0.0	chr11	17209594	17209662	(117876960)	+	(TTTC)n	Simple_repeat	1	75	(0)	598290
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
2554	6.5	0.0	0.0	chr11	17388300	17388605	(117698017)	+	AluSg	SINE/Alu	1	306	(4)	598661
25	24.8	3.2	5.4	chr11	17389112	17389237	(117697385)	+	(CGCCCG)n	Simple_repeat	1	130	(0)	598662
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
835	8.9	1.0	0.0	chr11	18106390	18106490	(116980132)	C	AluJo	SINE/Alu	(210)	102	1	599910
2325	19.4	13.7	1.2	chr11	18491156	18491761	(116594861)	+	MER77B	LTR/ERVL	1	694	(6)	600627
2420	10.0	0.0	0.0	chr11	20386626	20386934	(114699688)	C	AluSx	SINE/Alu	(3)	309	1	603848
739	23.5	2.5	7.1	chr11	20386935	20387082	(114699540)	C	MIR	SINE/MIR	(102)	160	15	603847
957	24.2	0.9	3.5	chr11	20458972	20459198	(114627424)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	603964
260	26.1	2.8	2.8	chr11	20459298	20459368	(114627254)	C	MER91C	DNA/hAT-Tip100	(28)	112	42	603965
772	20.9	7.8	1.7	chr11	20459436	20459615	(114627007)	+	MER58A	DNA/hAT-Charlie	33	224	(0)	603966
1875	13.2	6.8	0.0	chr11	20477294	20477565	(114609057)	+	AluSx	SINE/Alu	1	292	(20)	603988
2367	11.4	0.0	1.0	chr11	27204221	27204518	(107882104)	C	AluSq2	SINE/Alu	(18)	295	1	613577
564	26.8	4.3	1.3	chr11	27204578	27204809	(107881813)	C	MIR	SINE/MIR	(0)	262	6	613578
517	30.1	7.7	3.6	chr11	27204818	27205247	(107881375)	C	L1ME4a	LINE/L1	(35)	6089	5590	613579
187	17.0	6.0	6.0	chr11	27393654	27393703	(107692919)	C	L2a	LINE/L2	(0)	3426	3377	613868
338	27.5	14.9	2.8	chr11	27393753	27393969	(107692653)	+	MamTip2	DNA/hAT-Tip100	49	296	(9)	613869
12	18.4	6.7	2.1	chr11	31812204	31812248	(103274374)	+	GA-rich	Low_complexity	1	48	(0)	620443
46	0.0	0.0	0.0	chr11	31812303	31812341	(103274281)	+	(TG)n	Simple_repeat	1	39	(0)	620444
61	9.3	7.9	0.0	chr11	33261095	33261208	(101825414)	+	(TA)n	Simple_repeat	1	123	(0)	623169
5620	9.9	2.3	0.9	chr11	33261216	33262031	(101824591)	C	L1PREC2	LINE/L1	(0)	6160	5333	623170
23	26.6	3.5	1.1	chr11	34358179	34358265	(100728357)	+	G-rich	Low_complexity	1	90	(0)	625129
13	12.5	6.1	5.8	chr11	44726790	44726838	(90359784)	+	(GAGGAGGC)n	Simple_repeat	1	52	(0)	640716
2986	14.1	5.6	2.0	chr11	44823105	44823744	(90262878)	C	LTR28C	LTR/ERV1	(2)	634	1	640927
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
21	25.1	4.2	3.0	chr11	46121485	46121519	(88965103)	+	(CGCCCG)n	Simple_repeat	1	94	(0)	643317
26	7.9	7.3	1.7	chr11	46121520	46121574	(88965048)	+	(CCG)n	Simple_repeat	1	59	(0)	643318
13	6.8	0.0	10.5	chr11	46121702	46121753	(88964869)	+	(CCGGCC)n	Simple_repeat	1	46	(0)	643319
19	24.1	0.0	3.5	chr11	46121972	46122029	(88964593)	+	(GCG)n	Simple_repeat	1	58	(0)	643320
13	10.4	4.5	11.6	chr11	46122043	46122108	(88964514)	+	(CCGGCAG)n	Simple_repeat	1	69	(0)	643321
364	34.5	11.8	3.5	chr11	46209861	46210107	(88876515)	C	L2c	LINE/L2	(1085)	2334	2037	643482
13	20.3	0.0	0.0	chr11	46278976	46279005	(88807617)	+	(TCCC)n	Simple_repeat	1	30	(0)	643665
17	4.3	4.2	0.0	chr11	46279166	46279189	(88807433)	+	(CA)n	Simple_repeat	1	25	(0)	643666
15	16.9	2.9	2.8	chr11	46294912	46294946	(88791676)	+	(CT)n	Simple_repeat	1	36	(0)	643699
384	30.4	8.2	0.7	chr11	46297536	46297681	(88788941)	+	MIRc	SINE/MIR	108	265	(3)	643701
398	28.2	2.7	0.0	chr11	46308946	46309055	(88777567)	C	MIRb	SINE/MIR	(126)	142	30	643736
284	26.4	1.1	9.9	chr11	46309112	46309212	(88777410)	+	MIR3	SINE/MIR	110	201	(7)	643737
12	20.3	6.7	0.0	chr11	46382531	46382575	(88704047)	+	(GGCCGCG)n	Simple_repeat	1	48	(0)	643866
13	15.4	9.3	0.0	chr11	46391850	46391892	(88694730)	+	(GCCGC)n	Simple_repeat	1	47	(0)	643876
14	22.4	4.3	0.0	chr11	46392307	46392353	(88694269)	+	(GCCGC)n	Simple_repeat	1	49	(0)	643877
2365	8.1	0.3	0.3	chr11	46614910	46615206	(88471416)	C	AluSp	SINE/Alu	(10)	303	7	644304
2151	11.0	2.9	0.3	chr11	46615213	46615512	(88471110)	C	AluSx1	SINE/Alu	(4)	308	1	644305
16	0.0	0.0	0.0	chr11	46617337	46617354	(88469268)	+	(TC)n	Simple_repeat	1	18	(0)	644307
16	17.2	3.0	0.0	chr11	47177521	47177553	(87909069)	+	(GT)n	Simple_repeat	1	34	(0)	645386
13	20.9	0.0	4.8	chr11	47269595	47269636	(87816986)	+	(GCGCC)n	Simple_repeat	1	42	(0)	645590
350	27.5	1.8	6.0	chr11	47349282	47349397	(87737225)	+	MIR3	SINE/MIR	82	192	(16)	645716
566	25.4	2.3	3.6	chr11	47400745	47400965	(87685657)	+	L1M5	LINE/L1	5255	5472	(771)	645825
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
556	29.9	10.0	4.7	chr11	47643037	47643091	(87443531)	+	L2b	LINE/L2	3126	3187	(188)	646355
2457	8.0	0.0	1.0	chr11	47643092	47643404	(87443218)	C	AluSg	SINE/Alu	(0)	310	1	646356
49	2.1	0.0	0.0	chr11	47765370	47765418	(87321204)	+	(AAAAG)n	Simple_repeat	1	49	(0)	646691
1576	11.4	9.2	5.9	chr11	47765528	47765798	(87320824)	+	AluSz	SINE/Alu	14	294	(18)	646692
851	13.3	1.6	0.8	chr11	47765854	47765981	(87320641)	C	FLAM_C	SINE/Alu	(10)	133	5	646693
224	23.4	9.4	0.0	chr11	47847452	47847528	(87239094)	+	L2c	LINE/L2	3341	3425	(1)	646881
16	9.7	0.0	0.0	chr11	47847635	47847664	(87238958)	+	(G)n	Simple_repeat	1	30	(0)	646890
2436	5.5	0.7	0.0	chr11	47943404	47943693	(87142929)	C	AluSp	SINE/Alu	(20)	293	2	647167
15	30.1	0.0	1.7	chr11	47943694	47943713	(87142909)	+	(TAA)n	Simple_repeat	3	22	(0)	647168
12	30.0	3.2	1.5	chr11	47943713	47943775	(87142847)	+	G-rich	Low_complexity	1	65	(0)	647169
302	23.6	15.4	5.0	chr11	47943801	47943933	(87142689)	C	MIRb	SINE/MIR	(74)	194	34	647170
352	27.5	7.8	7.0	chr11	47944053	47944267	(87142355)	+	LTR104_Mam	LTR/Gypsy	76	292	(1217)	647171
13	10.8	6.5	0.0	chr11	57321955	57321985	(77764637)	+	GA-rich	Low_complexity	1	33	(0)	653460
26	28.3	2.2	5.0	chr11	57322379	57322514	(77764108)	+	(CCTC)n	Simple_repeat	1	139	(0)	653461
17	24.0	0.0	0.0	chr11	57335781	57335819	(77750803)	+	GA-rich	Low_complexity	1	39	(0)	653480
365	22.6	3.1	1.1	chr11	57472784	57472877	(77613745)	C	MIRb	SINE/MIR	(136)	132	37	653780
760	26.8	3.3	0.1	chr11	57472887	57473092	(77613530)	+	MIR	SINE/MIR	40	249	(13)	653781
246	20.8	0.0	0.0	chr11	57473166	57473213	(77613409)	+	L2a	LINE/L2	3377	3424	(2)	653782
494	27.4	0.8	0.0	chr11	57473229	57473352	(77613270)	C	MIR3	SINE/MIR	(3)	205	81	653783
745	16.2	1.2	0.0	chr11	57492076	57492207	(77594415)	+	FLAM_C	SINE/Alu	6	220	(82)	653819
693	30.2	2.0	1.5	chr11	57566342	57566536	(77520086)	+	MIRb	SINE/MIR	25	220	(48)	654003
197	29.5	10.4	1.0	chr11	57566909	57567004	(77519618)	+	L2a	LINE/L2	3312	3417	(9)	654004
35	14.8	2.9	1.4	chr11	57649705	57649773	(77436849)	+	(TC)n	Simple_repeat	1	71	(0)	654197
12	25.8	0.0	2.3	chr11	57649784	57649826	(77436796)	+	G-rich	Low_complexity	1	43	(0)	654198
15	0.0	5.3	0.0	chr11	58579066	58579084	(76507538)	+	(GC)n	Simple_repeat	1	20	(0)	655686
17	14.4	0.0	0.0	chr11	58579218	58579248	(76507374)	+	(CGC)n	Simple_repeat	1	31	(0)	655687
14	12.5	0.0	0.0	chr11	58579456	58579481	(76507141)	+	(GCC)n	Simple_repeat	1	26	(0)	655688
2265	12.0	0.0	0.0	chr11	59960131	59960429	(75126193)	+	AluSx	SINE/Alu	1	299	(13)	657714
257	15.6	4.2	0.0	chr11	59960449	59960493	(75126129)	+	L1MD	LINE/L1	5544	5590	(2405)	657715
911	19.1	4.1	3.2	chr11	59960486	59960503	(75126119)	+	L1MB5	LINE/L1	5626	5643	(531)	657710
2449	22.1	1.6	0.2	chr11	59960504	59961014	(75125608)	+	LTR53	LTR/ERVL	1	518	(1)	657716
212	22.1	7.4	11.7	chr11	60841672	60841799	(74244823)	C	MIR3	SINE/MIR	(69)	139	18	658979
385	31.5	8.1	0.2	chr11	60905900	60906084	(74180538)	C	MIR3	SINE/MIR	(1)	207	11	659080
13	21.9	2.3	2.2	chr11	60906383	60906426	(74180196)	+	(GGCGCCG)n	Simple_repeat	1	45	(0)	659081
2281	8.1	0.0	0.3	chr11	61070240	61070534	(74016088)	+	AluY	SINE/Alu	1	294	(17)	659441
3173	11.8	0.4	1.4	chr11	61070638	61071129	(74015493)	C	LTR15	LTR/ERV1	(6)	487	1	659442
13	22.3	1.9	5.6	chr11	61281503	61281555	(73805067)	+	GA-rich	Low_complexity	1	54	(0)	659861
353	27.9	7.2	5.5	chr11	61390878	61391040	(73695582)	+	LTR33	LTR/ERVL	45	210	(305)	660080
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
11	27.6	0.0	0.0	chr11	61429967	61430005	(73656617)	+	(CCGCCCC)n	Simple_repeat	1	39	(0)	660145
11	17.6	5.0	2.4	chr11	61891329	61891368	(73195254)	+	(GCTCCCG)n	Simple_repeat	1	42	(0)	661020
24	14.5	3.6	1.8	chr11	61891464	61891518	(73195104)	+	(CGC)n	Simple_repeat	1	57	(0)	661021
14	25.0	2.1	0.0	chr11	61891588	61891634	(73194988)	+	(CCCGC)n	Simple_repeat	1	48	(0)	661022
14	23.6	1.3	7.9	chr11	61917599	61917673	(73168949)	+	(GCCCG)n	Simple_repeat	1	76	(0)	661066
39	0.0	0.0	0.0	chr11	61972141	61972176	(73114446)	+	(GGAG)n	Simple_repeat	1	36	(0)	661194
180	26.7	9.6	1.3	chr11	62544883	62544958	(72541664)	C	L2b	LINE/L2	(2)	3373	3291	662281
215	28.2	9.3	1.3	chr11	62545001	62545079	(72541543)	C	L2c	LINE/L2	(12)	3375	3290	662282
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
1857	10.4	9.2	0.4	chr11	62561124	62561392	(72525230)	+	AluSx1	SINE/Alu	1	295	(17)	662306
12	31.2	1.9	0.0	chr11	62599540	62599591	(72487031)	+	A-rich	Low_complexity	1	53	(0)	662385
18	25.8	1.8	0.0	chr11	62771426	62771480	(72315142)	+	(CGC)n	Simple_repeat	1	56	(0)	662766
221	28.3	0.0	1.6	chr11	62771868	62771928	(72314694)	C	MIRc	SINE/MIR	(120)	148	89	662767
11	24.6	0.0	2.5	chr11	62831088	62831127	(72255495)	+	G-rich	Low_complexity	1	40	(0)	662904
312	25.4	2.9	0.0	chr11	62882243	62882309	(72204313)	+	MIR3	SINE/MIR	74	142	(66)	663031
1468	13.5	0.9	1.3	chr11	62882489	62882718	(72203904)	C	AluSx3	SINE/Alu	(17)	294	66	663032
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
756	16.1	8.5	0.6	chr11	63760739	63760900	(71325722)	C	MER5A	DNA/hAT-Charlie	(13)	176	1	664328
12	30.1	0.0	3.6	chr11	63768737	63768792	(71317830)	+	(GGCC)n	Simple_repeat	1	56	(0)	664341
25	21.5	0.0	0.0	chr11	63863440	63863473	(71223149)	+	(C)n	Simple_repeat	1	34	(0)	664564
2083	13.3	0.3	0.0	chr11	63863474	63863759	(71222863)	C	AluSx1	SINE/Alu	(21)	291	5	664565
25	21.5	0.0	0.0	chr11	63863760	63863779	(71222843)	+	(C)n	Simple_repeat	1	20	(0)	664566
15	23.4	1.8	5.2	chr11	63938999	63939055	(71147567)	+	(GCC)n	Simple_repeat	1	58	(0)	664694
737	22.3	23.2	0.7	chr11	64183778	64184167	(70902455)	+	L2a	LINE/L2	2627	3129	(297)	665139
1992	9.2	0.0	3.2	chr11	64184197	64184477	(70902145)	+	AluSz	SINE/Alu	2	273	(39)	665140
1451	13.2	0.4	8.9	chr11	64184478	64184735	(70901887)	+	AluJb	SINE/Alu	77	312	(0)	665141
12	0.0	3.9	7.4	chr11	64208146	64208171	(70878451)	+	(GTGG)n	Simple_repeat	1	27	(0)	665184
231	22.8	13.7	3.8	chr11	64231073	64231177	(70855445)	C	MIRc	SINE/MIR	(141)	127	11	665227
2502	6.5	1.3	0.0	chr11	64231331	64231639	(70854983)	C	AluSp	SINE/Alu	(0)	313	1	665228
11	22.0	2.2	4.3	chr11	64234313	64234358	(70852264)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	665231
17	13.1	0.0	8.2	chr11	64234457	64234505	(70852117)	+	(GCCCC)n	Simple_repeat	1	49	(0)	665232
18	3.7	3.6	0.0	chr11	64234646	64234673	(70851949)	+	(CTGCG)n	Simple_repeat	1	29	(0)	665233
13	14.8	0.0	8.9	chr11	64234706	64234750	(70851872)	+	(CGGCCC)n	Simple_repeat	1	45	(0)	665234
15	12.2	0.0	0.0	chr11	64234903	64234929	(70851693)	+	(GCCC)n	Simple_repeat	1	27	(0)	665235
210	25.6	3.2	10.0	chr11	64269299	64269398	(70817224)	+	L2a	LINE/L2	3290	3421	(5)	665281
201	35.0	0.0	0.0	chr11	64272009	64272068	(70814554)	C	L2b	LINE/L2	(2)	3373	3314	665285
1755	11.6	2.0	0.0	chr11	64272098	64272339	(70814283)	+	AluSc8	SINE/Alu	60	306	(5)	665286
2131	9.9	1.3	3.8	chr11	64318596	64318908	(70767714)	C	AluSx	SINE/Alu	(7)	305	1	665376
12	16.1	4.3	6.1	chr11	64357830	64357876	(70728746)	+	(TCTCC)n	Simple_repeat	1	49	(0)	665463
41	0.0	0.0	7.1	chr11	64836373	64836428	(70250194)	+	(CTCACCCAC)n	Simple_repeat	1	56	(0)	666310
283	22.2	2.7	1.4	chr11	64836621	64836693	(70249929)	C	MIRc	SINE/MIR	(145)	123	50	666311
16	9.3	0.0	0.0	chr11	64836707	64836729	(70249893)	+	(G)n	Simple_repeat	1	23	(0)	666312
396	33.5	7.7	1.1	chr11	64837164	64837344	(70249278)	+	MIRb	SINE/MIR	7	200	(68)	666313
194	33.3	0.0	0.0	chr11	64845222	64845284	(70241338)	C	MIRc	SINE/MIR	(94)	174	112	666323
1782	14.8	4.7	1.7	chr11	64845580	64845870	(70240752)	C	AluJo	SINE/Alu	(12)	300	1	666324
14	22.0	2.4	0.0	chr11	64854629	64854670	(70231952)	+	(CGTCGC)n	Simple_repeat	1	43	(0)	666341
192	38.9	3.1	2.3	chr11	64854974	64855102	(70231520)	+	MIRb	SINE/MIR	100	229	(39)	666342
12	17.3	6.1	3.9	chr11	64887910	64887958	(70198664)	+	(GCCCAG)n	Simple_repeat	1	52	(0)	666394
29	21.7	1.1	5.3	chr11	65181833	65181926	(69904696)	+	GA-rich	Low_complexity	1	95	(0)	667023
274	24.0	5.0	0.0	chr11	65418923	65419018	(69667604)	C	L2a	LINE/L2	(262)	3164	3064	667508
18	0.0	3.9	0.0	chr11	65421803	65421828	(69664794)	+	(AAAT)n	Simple_repeat	1	27	(0)	667511
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
901	25.3	14.0	9.7	chr11	65459204	65459497	(69627125)	C	MLT1F	LTR/ERVL-MaLR	(134)	414	99	667568
1893	19.3	6.3	6.3	chr11	65459498	65459871	(69626751)	+	MER74A	LTR/ERVL	1	374	(184)	667570
2364	9.5	0.3	0.0	chr11	65459872	65460175	(69626447)	+	AluSc8	SINE/Alu	7	311	(0)	667571
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
182	31.5	1.1	13.2	chr11	65524698	65524803	(69561819)	C	MIRb	SINE/MIR	(76)	192	100	667713
67	24.2	1.5	5.7	chr11	65524835	65525093	(69561529)	+	(CCGCC)n	Simple_repeat	1	263	(0)	667714
59	0.0	6.0	0.0	chr11	65664329	65664395	(69422227)	+	(TGTAT)n	Simple_repeat	1	71	(0)	667911
1991	12.7	0.0	2.4	chr11	65893517	65893807	(69192815)	+	AluSz6	SINE/Alu	9	292	(20)	668362
634	30.9	7.1	3.2	chr11	65932312	65932622	(69154000)	C	LTR78	LTR/ERV1	(955)	349	26	668464
2149	13.1	0.0	1.3	chr11	65932721	65933025	(69153597)	C	AluSz	SINE/Alu	(11)	301	1	668467
19	13.3	8.4	3.9	chr11	66012628	66012664	(69073958)	+	(CCTCCACC)n	Simple_repeat	1	77	(0)	668644
24	9.5	0.0	0.0	chr11	66012665	66012698	(69073924)	+	(C)n	Simple_repeat	1	34	(0)	668645
11	24.4	4.0	1.9	chr11	66279173	66279222	(68807400)	+	(CTTCCC)n	Simple_repeat	1	52	(0)	669168
17	14.2	1.9	7.3	chr11	66288893	66288946	(68797676)	+	(CGCGC)n	Simple_repeat	1	55	(0)	669184
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
298	31.1	10.5	0.8	chr11	66466055	66466174	(68620448)	+	MIRb	SINE/MIR	102	234	(34)	669578
15	15.9	2.9	0.0	chr11	66466274	66466308	(68620314)	+	GA-rich	Low_complexity	1	36	(0)	669579
359	26.6	1.9	6.0	chr11	66546597	66546744	(68539878)	C	MIRb	SINE/MIR	(64)	166	28	669759
30	0.0	0.0	0.0	chr11	66728060	66728087	(68358535)	+	(CCCGAC)n	Simple_repeat	1	28	(0)	670105
47	21.3	5.8	4.6	chr11	66728175	66728381	(68358241)	+	(GCGG)n	Simple_repeat	1	219	(0)	670106
22	26.8	3.8	0.0	chr11	66856356	66856435	(68230187)	+	G-rich	Low_complexity	1	83	(0)	670383
390	34.5	13.4	3.3	chr11	67055981	67056280	(68030342)	+	L2c	LINE/L2	3014	3348	(39)	670829
16	31.1	1.4	1.4	chr11	67118966	67119034	(67967588)	+	G-rich	Low_complexity	1	70	(0)	671004
18	4.2	0.0	0.0	chr11	67119342	67119366	(67967256)	+	(CGG)n	Simple_repeat	1	25	(0)	671005
796	29.7	11.7	4.6	chr11	67262772	67263512	(67823110)	C	L2b	LINE/L2	(228)	3198	2401	671330
16	5.2	0.0	0.0	chr11	67289622	67289641	(67796981)	+	(C)n	Simple_repeat	1	20	(0)	671353
13	6.1	11.1	2.5	chr11	67373773	67373808	(67712814)	+	G-rich	Low_complexity	1	40	(0)	671518
12	18.3	0.0	3.0	chr11	67373840	67373872	(67712750)	+	(CGAGG)n	Simple_repeat	1	33	(0)	671519
13	18.6	3.6	6.9	chr11	67374065	67374120	(67712502)	+	(CCT)n	Simple_repeat	1	58	(0)	671520
15	13.9	0.0	0.0	chr11	67375183	67375206	(67711416)	+	(G)n	Simple_repeat	1	24	(0)	671521
629	27.2	2.7	7.8	chr11	67378452	67378639	(67707983)	C	MIRb	SINE/MIR	(69)	199	11	671529
15	15.3	2.6	2.6	chr11	67436943	67436980	(67649642)	+	G-rich	Low_complexity	1	39	(0)	671641
322	35.4	4.7	1.2	chr11	68041017	68041182	(67045440)	+	MIRb	SINE/MIR	6	177	(91)	672666
2417	8.1	0.0	0.7	chr11	68908843	68909140	(66177482)	C	AluSx4	SINE/Alu	(14)	296	1	674202
15	13.7	0.0	0.0	chr11	68909174	68909197	(66177425)	+	(G)n	Simple_repeat	1	24	(0)	674203
2135	12.5	0.0	0.0	chr11	68909200	68909479	(66177143)	C	AluSz6	SINE/Alu	(32)	280	1	674204
18	17.9	0.0	0.0	chr11	69234639	69234670	(65851952)	+	A-rich	Low_complexity	1	32	(0)	674755
15	19.6	0.0	0.0	chr11	69234745	69234773	(65851849)	+	G-rich	Low_complexity	1	29	(0)	674756
639	22.9	14.5	2.1	chr11	69234929	69235169	(65851453)	C	MLT1K	LTR/ERVL-MaLR	(306)	289	14	674757
295	21.6	4.6	8.1	chr11	69948899	69949034	(65137588)	C	LTR33	LTR/ERVL	(29)	486	356	676006
373	25.0	10.9	3.4	chr11	69949128	69949305	(65137317)	C	LTR33	LTR/ERVL	(293)	222	30	676006
47	23.5	4.9	0.7	chr11	70048555	70048696	(65037926)	+	(TC)n	Simple_repeat	1	149	(0)	676187
15	26.1	0.0	7.6	chr11	70048648	70048726	(65037896)	+	(CCCCCAC)n	Simple_repeat	1	79	(0)	676188
1022	12.8	5.2	0.0	chr11	70251454	70251617	(64835005)	C	AluSg4	SINE/Alu	(0)	310	138	676539
16	18.9	0.0	0.0	chr11	70271794	70271823	(64814799)	+	(C)n	Simple_repeat	1	30	(0)	676600
491	29.5	11.0	4.5	chr11	71449237	71449566	(63637056)	C	L1MC4	LINE/L1	(0)	8042	7689	678284
1689	14.5	3.4	3.7	chr11	71449570	71449866	(63636756)	C	AluJo	SINE/Alu	(0)	312	17	678285
1483	18.1	7.8	1.1	chr11	71449994	71450480	(63636142)	C	LTR24B	LTR/ERV1	(6)	570	31	678286
832	11.0	0.0	0.0	chr11	72091761	72091869	(62994753)	C	AluJb	SINE/Alu	(187)	125	17	679333
274	25.3	0.0	0.0	chr11	72223701	72223779	(62862843)	C	MIR1_Amn	SINE/MIR	(77)	153	75	679579
29	24.4	3.2	1.0	chr11	72223794	72223887	(62862735)	+	(GCGCG)n	Simple_repeat	1	97	(0)	679580
5656	6.8	1.6	2.6	chr11	72572338	72573077	(62513545)	C	MER4E	LTR/ERV1	(23)	743	1	680212
1795	11.0	9.4	0.9	chr11	72573078	72573398	(62513224)	+	Tigger4b	DNA/TcMar-Tigger	11	361	(0)	680214
36	9.4	3.5	0.0	chr11	72722141	72722197	(62364425)	+	(GA)n	Simple_repeat	1	59	(0)	680458
37	5.1	0.0	0.0	chr11	72725296	72725336	(62361286)	+	(CT)n	Simple_repeat	1	41	(0)	680465
12	15.9	5.7	0.0	chr11	72752365	72752399	(62334223)	+	(ACCGCC)n	Simple_repeat	1	37	(0)	680518
16	18.0	0.0	2.5	chr11	72752465	72752504	(62334118)	+	G-rich	Low_complexity	1	40	(0)	680519
258	31.6	2.2	8.9	chr11	72788173	72788319	(62298303)	+	MIRc	SINE/MIR	86	227	(41)	680588
15	11.8	8.1	0.0	chr11	73141921	73141957	(61944665)	+	GA-rich	Low_complexity	1	40	(0)	681262
17	17.3	2.0	4.0	chr11	73376875	73376923	(61709699)	+	(GGCGC)n	Simple_repeat	1	50	(0)	681726
249	33.1	9.7	6.7	chr11	73478688	73478836	(61607786)	C	L2b	LINE/L2	(2)	3373	3220	681929
1034	27.7	7.3	5.6	chr11	73478931	73479358	(61607264)	+	MLT1J	LTR/ERVL-MaLR	74	509	(3)	681930
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
367	33.9	9.3	0.0	chr11	73647138	73647302	(61439320)	+	L2b	LINE/L2	3085	3266	(109)	682324
56	0.0	0.0	0.0	chr11	73964766	73964813	(61121809)	+	(TG)n	Simple_repeat	1	48	(0)	683132
24	17.3	1.6	3.2	chr11	74398449	74398510	(60688112)	+	(CCGCCC)n	Simple_repeat	1	63	(0)	683975
199	21.9	0.0	0.0	chr11	74707376	74707416	(60379206)	+	L2c	LINE/L2	3131	3171	(216)	684648
347	31.8	10.7	10.3	chr11	74707606	74708170	(60378452)	+	LTR16E2	LTR/ERVL	1	568	(0)	684649
184	32.8	13.3	3.2	chr11	75468263	75468451	(59618171)	C	L3	LINE/CR1	(7)	4092	3882	686112
497	23.0	4.2	0.0	chr11	75468475	75468587	(59618035)	+	MIRb	SINE/MIR	41	158	(110)	686113
180	25.0	11.7	0.0	chr11	75468698	75468765	(59617857)	C	L3	LINE/CR1	(213)	3886	3810	686112
279	31.7	3.5	6.3	chr11	75468796	75468977	(59617645)	+	MIRb	SINE/MIR	24	209	(59)	686114
15	15.8	4.5	2.2	chr11	75525673	75525716	(59560906)	+	(GCAGG)n	Simple_repeat	1	46	(0)	686263
2215	10.7	2.0	0.0	chr11	75576870	75577159	(59509463)	C	AluSc	SINE/Alu	(13)	296	1	686379
30	0.0	3.1	0.0	chr11	75577322	75577353	(59509269)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	686380
579	26.8	12.0	3.0	chr11	75577477	75577804	(59508818)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	89	686381
198	25.6	2.2	8.2	chr11	76321278	76321375	(58765247)	C	L2b	LINE/L2	(219)	3168	3077	687767
268	34.2	16.9	0.9	chr11	76321391	76321833	(58764789)	+	L2c	LINE/L2	2666	3199	(188)	687774
17	19.8	3.2	4.6	chr11	76380840	76380902	(58705720)	+	(CGCC)n	Simple_repeat	1	65	(0)	687898
16	27.2	1.5	3.0	chr11	76380912	76380976	(58705646)	+	G-rich	Low_complexity	1	66	(0)	687899
14	30.3	0.0	1.9	chr11	76381067	76381120	(58705502)	+	(CCG)n	Simple_repeat	1	54	(0)	687900
21	15.5	0.0	0.0	chr11	76782958	76782993	(58303629)	+	(CA)n	Simple_repeat	1	36	(0)	688673
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
11	14.1	10.3	0.0	chr11	76783236	76783274	(58303348)	+	(CGCCCGG)n	Simple_repeat	1	43	(0)	688675
16	13.1	0.0	5.4	chr11	76860956	76860992	(58225630)	+	(GGC)n	Simple_repeat	1	37	(0)	688821
1321	7.6	0.0	0.0	chr11	76885284	76885454	(58201168)	C	L1PA8	LINE/L1	(1)	6171	6001	688872
2149	20.0	6.5	3.4	chr11	76885455	76885910	(58200712)	C	MER74A	LTR/ERVL	(73)	485	6	688871
823	28.8	10.0	2.0	chr11	76885916	76886422	(58200200)	C	L2a	LINE/L2	(46)	3380	2827	688873
199	24.6	2.8	6.8	chr11	77126774	77126847	(57959775)	+	MIRb	SINE/MIR	190	260	(8)	689302
18	28.5	1.8	0.0	chr11	77128275	77128329	(57958293)	+	GA-rich	Low_complexity	1	56	(0)	689303
17	8.3	0.0	0.0	chr11	77820687	77820712	(57265910)	+	(CCG)n	Simple_repeat	1	26	(0)	690659
222	23.2	1.8	5.1	chr11	78050853	78050911	(57035711)	C	L2c	LINE/L2	(68)	3319	3263	691228
216	31.1	0.0	0.0	chr11	78051072	78051145	(57035477)	+	MIR3	SINE/MIR	116	189	(19)	691229
253	26.5	9.1	11.1	chr11	78051228	78051452	(57035170)	+	Tigger19b	DNA/TcMar-Tigger	227	446	(104)	691230
3328	10.0	2.1	0.7	chr11	78080836	78081299	(57005323)	+	LTR7C	LTR/ERV1	1	471	(0)	691310
9528	20.3	2.3	3.8	chr11	78081300	78085065	(57001557)	+	HERVH-int	LTR/ERV1	1	3876	(3837)	691310
205	30.5	7.9	0.0	chr11	78188432	78188513	(56898109)	C	MIRc	SINE/MIR	(106)	162	74	691567
13	27.1	3.4	1.6	chr11	78189069	78189127	(56897495)	+	(CCAGC)n	Simple_repeat	1	61	(0)	691568
327	26.7	2.8	0.9	chr11	78189235	78189340	(56897282)	+	MIR3	SINE/MIR	24	131	(77)	691569
2292	6.5	1.1	0.4	chr11	78380214	78380488	(56706134)	C	AluSc	SINE/Alu	(17)	292	16	691916
2902	12.2	3.2	2.6	chr11	78380651	78381114	(56705508)	+	LTR24	LTR/ERV1	1	467	(0)	691917
13	17.2	6.9	4.8	chr11	86068534	86068591	(49018031)	+	GA-rich	Low_complexity	1	62	(0)	704855
12	22.6	0.0	2.6	chr11	86068596	86068633	(49017989)	+	G-rich	Low_complexity	1	38	(0)	704856
16	10.8	0.0	3.1	chr11	86068852	86068883	(49017739)	+	(CCCCAC)n	Simple_repeat	1	32	(0)	704857
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
233	29.6	13.1	3.2	chr11	86221301	86221457	(48865165)	+	L2a	LINE/L2	3230	3404	(22)	705169
17	4.9	0.0	0.0	chr11	93850663	93850683	(41235939)	+	(G)n	Simple_repeat	1	21	(0)	716301
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
18	28.0	3.3	3.2	chr11	94771488	94771578	(40315044)	+	(GTTTT)n	Simple_repeat	1	94	(0)	717653
238	28.3	5.5	7.4	chr11	95153218	95153366	(39933256)	+	MIRc	SINE/MIR	119	264	(4)	718204
216	38.4	7.0	0.0	chr11	95153386	95153518	(39933104)	C	MIRc	SINE/MIR	(61)	207	65	718205
538	29.6	8.5	0.9	chr11	95153531	95153758	(39932864)	C	MIRb	SINE/MIR	(20)	248	2	718206
1883	13.3	1.6	4.4	chr11	96254814	96255129	(38831493)	C	AluJb	SINE/Alu	(5)	307	1	719873
458	31.5	0.8	0.0	chr11	96255131	96255260	(38831362)	+	L2c	LINE/L2	2794	2924	(495)	719874
432	24.2	18.2	0.0	chr11	96255286	96255438	(38831184)	C	MIRb	SINE/MIR	(5)	263	77	719875
383	19.9	13.0	5.3	chr11	96255682	96255851	(38830771)	+	MLT1L	LTR/ERVL-MaLR	350	534	(76)	719876
20	16.6	4.2	0.0	chr11	96343173	96343220	(38743402)	+	GA-rich	Low_complexity	1	50	(0)	720005
12	25.8	1.9	3.6	chr11	96343386	96343439	(38743183)	+	(AGCTC)n	Simple_repeat	1	55	(0)	720006
1920	14.0	1.6	0.3	chr11	96506661	96506968	(38579654)	+	LTR46-int	LTR/ERV1	6674	6985	(0)	720203
1920	15.8	3.5	17.0	chr11	96506969	96506999	(38579623)	+	LTR46	LTR/ERV1	1	34	(426)	720203
26	0.0	0.0	0.0	chr11	96507000	96507024	(38579598)	+	(C)n	Simple_repeat	1	25	(0)	720204
1920	15.8	3.5	17.0	chr11	96507025	96507527	(38579095)	+	LTR46	LTR/ERV1	35	459	(1)	720203
27	3.4	0.0	0.0	chr11	111454821	111454850	(23631772)	+	(GGGTTGG)n	Simple_repeat	1	30	(0)	741407
42	0.0	0.0	0.0	chr11	111936846	111936881	(23149741)	+	(GT)n	Simple_repeat	1	36	(0)	742240
38	7.0	0.0	0.0	chr11	111936987	111937032	(23149590)	+	(GT)n	Simple_repeat	1	46	(0)	742241
16	5.2	0.0	0.0	chr11	111937077	111937096	(23149526)	+	(GT)n	Simple_repeat	1	20	(0)	742241
16	33.0	2.2	2.2	chr11	111937098	111937187	(23149435)	+	(GCGC)n	Simple_repeat	1	92	(0)	742242
2138	13.3	14.8	0.0	chr11	113664738	113665105	(21421517)	+	LTR47A2	LTR/ERVL	1	432	(0)	744951
3936	16.4	1.8	2.2	chr11	113665106	113665121	(21421501)	C	L1MB7	LINE/L1	(143)	6539	6529	744950
2735	14.7	9.7	0.2	chr11	113665122	113665578	(21421044)	+	LTR10B	LTR/ERV1	1	505	(0)	744952
936	25.6	7.5	3.3	chr11	113691274	113691632	(21394990)	+	MER113	DNA/hAT-Charlie	1	375	(146)	744999
691	27.4	15.0	2.5	chr11	113838290	113838855	(21247767)	+	L2a	LINE/L2	2750	3394	(32)	745234
17	23.7	0.0	3.7	chr11	115504293	115504358	(19582264)	+	(CAGCCG)n	Simple_repeat	1	63	(0)	747726
2180	9.9	0.3	1.4	chr11	117087158	117087449	(17999173)	+	AluSx1	SINE/Alu	1	289	(23)	750495
690	26.6	3.4	2.3	chr11	117087647	117087889	(17998733)	+	L1ME4c	LINE/L1	5527	5742	(382)	750496
17	16.7	2.4	2.3	chr11	117098372	117098413	(17988209)	+	(GCC)n	Simple_repeat	1	43	(0)	750510
499	21.8	4.0	9.8	chr11	117189495	117189677	(17896945)	+	MIRb	SINE/MIR	47	230	(38)	750710
12	24.9	2.0	3.9	chr11	117232535	117232585	(17854037)	+	(CGG)n	Simple_repeat	1	52	(0)	750766
24	28.1	3.3	2.8	chr11	117232758	117232873	(17853749)	+	G-rich	Low_complexity	1	116	(0)	750767
226	18.2	0.0	0.0	chr11	117908874	117908917	(17177705)	+	Plat_L3	LINE/CR1	3510	3553	(33)	751952
23	16.4	1.9	3.8	chr11	118176619	118176670	(16909952)	+	GA-rich	Low_complexity	1	53	(0)	752450
1083	14.1	3.5	0.0	chr11	118176918	118177080	(16909542)	+	AluSz6	SINE/Alu	6	174	(138)	752451
14	25.5	0.0	6.3	chr11	118437512	118437590	(16649032)	+	(CACCC)n	Simple_repeat	1	73	(0)	752907
2364	8.0	0.7	0.7	chr11	118571808	118572106	(16514516)	+	AluSz	SINE/Alu	1	299	(13)	753161
329	17.3	0.0	13.8	chr11	118572107	118572138	(16514484)	C	L1MB7	LINE/L1	(868)	5278	5247	753159
196	29.6	4.1	1.4	chr11	118572143	118572214	(16514408)	+	MIRc	SINE/MIR	175	248	(20)	753158
180	28.4	2.2	12.0	chr11	118572963	118573062	(16513560)	C	Penelope1_Vert	LINE/Penelope	(139)	948	859	753162
19	2.7	7.1	4.4	chr11	118607526	118607567	(16479055)	+	(GGGACGG)n	Simple_repeat	1	45	(0)	753235
12	21.0	5.9	1.9	chr11	118910433	118910483	(16176139)	+	(CCAGCC)n	Simple_repeat	1	54	(0)	753852
12	18.8	2.6	2.6	chr11	118910595	118910632	(16175990)	+	(CCGCCC)n	Simple_repeat	1	39	(0)	753853
17	9.2	5.7	0.0	chr11	118910659	118910693	(16175929)	+	(GAGC)n	Simple_repeat	1	37	(0)	753854
37	7.0	0.0	0.0	chr11	118918264	118918308	(16168314)	+	(TG)n	Simple_repeat	1	45	(0)	753860
21	13.9	0.0	0.0	chr11	118926247	118926279	(16160343)	+	(AC)n	Simple_repeat	1	33	(0)	753869
390	26.6	9.1	2.0	chr11	118926283	118926450	(16160172)	+	L2c	LINE/L2	3185	3382	(5)	753870
21	0.0	0.0	0.0	chr11	118926498	118926518	(16160104)	+	(TC)n	Simple_repeat	1	21	(0)	753871
31	0.0	0.0	0.0	chr11	118926519	118926545	(16160077)	+	(CA)n	Simple_repeat	1	27	(0)	753872
2435	8.1	1.0	0.0	chr11	119068438	119068744	(16017878)	C	AluSx3	SINE/Alu	(0)	311	2	754201
2241	9.4	0.3	2.9	chr11	119068753	119069059	(16017563)	C	AluSq2	SINE/Alu	(14)	299	1	754202
248	18.3	6.2	3.2	chr11	119338670	119338731	(15747891)	C	MER91A	DNA/hAT-Tip100	(22)	174	111	754709
510	26.0	9.9	10.6	chr11	119427081	119427355	(15659267)	C	L2c	LINE/L2	(15)	3360	3088	754851
960	23.0	0.5	3.6	chr11	119427356	119427549	(15659073)	+	MLT1H2	LTR/ERVL-MaLR	1	188	(301)	754852
1005	24.8	3.5	6.5	chr11	119427766	119427827	(15658795)	+	MLT1G	LTR/ERVL-MaLR	2	59	(532)	754853
2512	6.3	0.0	0.3	chr11	119427828	119428127	(15658495)	+	AluY	SINE/Alu	1	299	(12)	754854
2293	11.5	0.0	0.0	chr11	119583841	119584136	(15502486)	+	AluSx	SINE/Alu	1	296	(16)	755128
466	21.6	1.8	3.5	chr11	119623877	119623991	(15462631)	C	MIRb	SINE/MIR	(142)	126	14	755204
11	16.2	10.0	1.8	chr11	119624416	119624465	(15462157)	+	(CTGGCC)n	Simple_repeat	1	55	(0)	755205
14	25.2	3.5	1.7	chr11	119729178	119729235	(15357387)	+	(CGCTCT)n	Simple_repeat	1	60	(0)	755357
290	25.0	11.8	1.3	chr11	119729597	119729745	(15356877)	C	MIR3	SINE/MIR	(24)	184	30	755358
11	24.9	0.0	2.5	chr11	120210851	120210890	(14875732)	+	(GCCCCC)n	Simple_repeat	1	40	(0)	756149
183	36.5	2.8	4.9	chr11	125075010	125075153	(10011469)	C	MIRc	SINE/MIR	(86)	182	42	763949
14	11.2	2.2	8.5	chr11	125164499	125164544	(9922078)	+	(GCCGCCC)n	Simple_repeat	1	47	(0)	764076
24	10.0	2.2	2.2	chr11	125164817	125164861	(9921761)	+	(GGC)n	Simple_repeat	1	46	(0)	764077
23	26.4	2.9	3.8	chr11	125164926	125165028	(9921594)	+	GA-rich	Low_complexity	1	106	(0)	764078
16	5.3	0.0	0.0	chr11	125517424	125517443	(9569179)	+	(A)n	Simple_repeat	1	20	(0)	764661
1142	17.7	2.1	2.9	chr11	126061939	126062182	(9024440)	C	UCON89	DNA/hAT?	(0)	242	1	765433
17	12.7	0.0	5.3	chr11	126062657	126062694	(9023928)	+	(GCG)n	Simple_repeat	1	38	(0)	765434
12	12.0	0.0	6.5	chr11	126062757	126062787	(9023835)	+	G-rich	Low_complexity	1	31	(0)	765435
378	23.0	4.2	5.0	chr11	126282647	126282763	(8803859)	+	MIRb	SINE/MIR	78	196	(72)	765822
21	16.4	0.0	0.0	chr12	389549	389590	(132885719)	+	(CGAGG)n	Simple_repeat	1	42	(0)	778653
20	27.6	0.0	0.0	chr12	389591	389606	(132885703)	+	(CGGCG)n	Simple_repeat	4	61	(0)	778654
25	11.7	0.0	0.0	chr12	541831	541867	(132733442)	+	(C)n	Simple_repeat	1	37	(0)	778940
187	29.0	0.0	4.2	chr12	575654	575725	(132699584)	+	L2b	LINE/L2	3303	3371	(4)	778991
181	31.4	1.1	1.1	chr12	575748	575834	(132699475)	C	MamTip2	DNA/hAT-Tip100	(151)	154	68	778992
13	32.3	0.0	0.0	chr12	752200	752205	(132523104)	+	(TTC)n	Simple_repeat	1	9	(33)	779403
15	5.6	0.0	0.0	chr12	752206	752224	(132523085)	+	(T)n	Simple_repeat	1	19	(0)	779404
13	32.3	0.0	0.0	chr12	752225	752241	(132523068)	+	(TTC)n	Simple_repeat	10	42	(0)	779403
230	22.4	10.4	9.7	chr12	3203141	3203311	(130071998)	+	L2a	LINE/L2	3190	3426	(0)	783497
348	27.4	2.8	5.4	chr12	4153889	4154000	(129121309)	+	MIRc	SINE/MIR	88	196	(72)	785050
5225	16.3	5.4	2.4	chr12	4154001	4154052	(129121257)	+	L1MC2	LINE/L1	5293	5341	(1003)	785051
27	0.0	0.0	0.0	chr12	4272028	4272056	(129003253)	+	(A)n	Simple_repeat	1	29	(0)	785269
11	21.5	6.0	1.9	chr12	4272316	4272365	(129002944)	+	(GCCCGC)n	Simple_repeat	1	53	(0)	785270
17	10.0	8.9	2.0	chr12	4275448	4275492	(128999817)	+	(CTC)n	Simple_repeat	1	49	(0)	785271
12	22.5	2.7	0.0	chr12	6167868	6167904	(127107405)	+	(GGTGGC)n	Simple_repeat	1	38	(0)	788155
187	29.2	12.4	7.8	chr12	6167939	6168053	(127107256)	C	MIR	SINE/MIR	(114)	148	28	788156
2217	9.6	0.4	0.0	chr12	6168200	6168480	(127106829)	C	AluSq2	SINE/Alu	(30)	283	2	788157
211	31.4	10.1	0.8	chr12	6168491	6168615	(127106694)	C	MamTip2	DNA/hAT-Tip100	(65)	240	103	788158
249	20.9	0.0	8.2	chr12	6168908	6168980	(127106329)	+	MamRep4096	DNA/hAT-Tip100	47	113	(313)	788159
63	0.0	1.8	0.0	chr12	6607672	6607728	(126667581)	+	(AC)n	Simple_repeat	1	58	(0)	789024
11	17.4	0.0	5.6	chr12	6613660	6613695	(126661614)	+	(CCCACT)n	Simple_repeat	1	36	(0)	789029
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
14	13.2	4.3	6.1	chr12	6689168	6689214	(126586095)	+	GA-rich	Low_complexity	1	49	(0)	789181
15	19.6	5.1	2.0	chr12	6764579	6764639	(126510670)	+	GA-rich	Low_complexity	1	62	(0)	789348
2148	10.1	1.0	0.7	chr12	6943024	6943319	(126331990)	+	AluSx3	SINE/Alu	1	297	(14)	789677
27	0.0	3.5	0.0	chr12	7108919	7108947	(126166362)	+	(CTG)n	Simple_repeat	1	30	(0)	789961
31	18.0	1.5	1.5	chr12	7108948	7109012	(126166297)	+	(GT)n	Simple_repeat	1	66	(0)	789962
21	25.4	0.0	0.0	chr12	7108989	7109039	(126166270)	+	GA-rich	Low_complexity	1	51	(0)	789963
14	14.5	5.0	2.4	chr12	7109056	7109095	(126166214)	+	(CTTCCT)n	Simple_repeat	1	42	(0)	789964
14	22.2	2.3	2.2	chr12	7440325	7440368	(125834941)	+	(GCC)n	Simple_repeat	1	45	(0)	790385
307	4.8	5.2	0.0	chr12	7440440	7440488	(125834821)	C	L1PA8A	LINE/L1	(301)	5830	5776	790386
2376	11.9	0.0	0.0	chr12	7440617	7440926	(125834383)	C	AluSx	SINE/Alu	(2)	310	1	790387
19	15.3	0.0	6.1	chr12	8033623	8033671	(125241638)	+	(CCT)n	Simple_repeat	1	49	(0)	791669
11	30.3	2.0	0.0	chr12	8697399	8697447	(124577862)	+	(CGGCCGG)n	Simple_repeat	1	50	(0)	792745
15	21.4	1.6	6.3	chr12	8697834	8697897	(124577412)	+	(CGCCG)n	Simple_repeat	1	60	(0)	792746
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
1095	17.0	9.1	2.0	chr12	9647683	9647736	(123627573)	C	L1MC2	LINE/L1	(269)	6075	6015	794128
15	9.4	9.6	5.3	chr12	12266562	12266613	(121008696)	+	(CCT)n	Simple_repeat	1	57	(0)	797793
508	23.8	0.8	0.8	chr12	12350540	12350666	(120924643)	C	L1ME4b	LINE/L1	(22)	870	744	798004
14	14.1	7.7	0.0	chr12	12562240	12562278	(120713031)	+	(CGCTCC)n	Simple_repeat	1	42	(0)	798342
12	12.3	5.1	4.9	chr12	12562720	12562758	(120712551)	+	G-rich	Low_complexity	1	41	(0)	798343
15	5.5	0.0	0.0	chr12	12716607	12716625	(120558684)	+	(T)n	Simple_repeat	1	19	(0)	798629
13	8.1	3.9	0.0	chr12	12717774	12717799	(120557510)	+	(TTTGT)n	Simple_repeat	1	27	(0)	798630
15	13.1	0.0	5.4	chr12	12724911	12724947	(120550362)	+	G-rich	Low_complexity	1	37	(0)	798633
11	24.1	0.0	0.0	chr12	12725318	12725351	(120549958)	+	(CGCCCC)n	Simple_repeat	1	34	(0)	798634
24	24.3	0.0	0.0	chr12	12725359	12725409	(120549900)	+	(TG)n	Simple_repeat	1	51	(0)	798635
18	27.2	1.7	1.7	chr12	23949251	23949309	(109326000)	+	GA-rich	Low_complexity	1	60	(0)	814232
15	29.1	5.1	0.0	chr12	23949700	23949731	(109325578)	+	(TC)n	Simple_repeat	1	33	(0)	814233
63	4.6	0.0	0.0	chr12	23949732	23949798	(109325511)	+	(CT)n	Simple_repeat	1	67	(0)	814234
15	29.1	5.1	0.0	chr12	23949799	23949824	(109325485)	+	(TC)n	Simple_repeat	2	29	(0)	814235
12	8.9	4.2	0.0	chr12	26833030	26833053	(106442256)	+	(GCC)n	Simple_repeat	1	25	(0)	818545
15	8.9	7.9	2.4	chr12	26833099	26833136	(106442173)	+	(CTC)n	Simple_repeat	1	41	(0)	818546
14	17.2	5.1	0.0	chr12	26833308	26833320	(106441989)	+	G-rich	Low_complexity	1	23	(39)	818547
13	8.4	0.0	3.7	chr12	26833321	26833347	(106441962)	+	(GGGGC)n	Simple_repeat	1	27	(0)	818548
14	17.2	5.1	0.0	chr12	26833348	26833366	(106441943)	+	G-rich	Low_complexity	24	62	(0)	818547
943	15.6	0.0	16.5	chr12	27435137	27435397	(105839912)	C	MER20	DNA/hAT-Charlie	(0)	219	2	819546
13	11.1	0.0	6.1	chr12	31326451	31326483	(101948826)	+	GA-rich	Low_complexity	1	33	(0)	825005
330	30.8	3.2	6.2	chr12	31371237	31371364	(101903945)	+	Charlie4z	DNA/hAT-Charlie	39	162	(5)	825131
229	18.2	0.0	0.0	chr12	31371518	31371561	(101903748)	C	MIR	SINE/MIR	(10)	252	209	825132
2215	10.6	1.9	0.0	chr12	31371573	31371874	(101903435)	+	AluSz	SINE/Alu	1	308	(4)	825133
2235	10.8	0.7	0.7	chr12	31371913	31372218	(101903091)	C	AluSq2	SINE/Alu	(7)	306	1	825134
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
13	31.2	1.0	6.1	chr12	31728865	31728961	(101546348)	+	(GGCGG)n	Simple_repeat	1	98	(0)	825911
2112	12.0	0.0	1.7	chr12	32030350	32030650	(101244659)	+	AluSq2	SINE/Alu	1	296	(17)	826630
16	22.7	0.0	0.0	chr12	32030957	32030988	(101244321)	+	(T)n	Simple_repeat	1	32	(0)	826631
1028	21.4	0.8	4.2	chr12	32031146	32031404	(101243905)	C	LTR16C	LTR/ERVL	(9)	480	231	826632
985	19.4	7.6	10.5	chr12	32040084	32040483	(101234826)	+	MER67C	LTR/ERV1	2	374	(337)	826656
1317	17.4	0.0	1.4	chr12	32681315	32681526	(100593783)	+	AluJb	SINE/Alu	47	255	(57)	827928
15	35.2	0.0	0.0	chr12	32681556	32681612	(100593697)	+	(CC)n	Simple_repeat	1	57	(0)	827929
19	14.6	2.0	4.0	chr12	32896815	32896863	(100378446)	+	(GCCCC)n	Simple_repeat	1	50	(0)	828309
12	12.6	0.0	3.6	chr12	32897112	32897139	(100378170)	+	(GCCCC)n	Simple_repeat	1	28	(0)	828310
249	25.2	8.1	3.6	chr12	34336106	34336270	(98939039)	+	GSATII	Satellite/centr	38	210	(6)	830067
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
186	32.8	11.6	1.6	chr12	45407497	45407620	(87867689)	C	MER5A	DNA/hAT-Charlie	(35)	154	17	840759
227	31.5	13.9	0.9	chr12	45407511	45407622	(87867687)	+	MER5A	DNA/hAT-Charlie	61	189	(0)	840760
410	30.6	15.9	1.0	chr12	45407741	45407938	(87867371)	C	MIRb	SINE/MIR	(34)	234	2	840761
20	0.0	0.0	0.0	chr12	45730874	45730895	(87544414)	+	(T)n	Simple_repeat	1	22	(0)	841284
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
11	22.1	3.9	3.8	chr12	46383051	46383101	(86892208)	+	(GCGGAG)n	Simple_repeat	1	53	(0)	842182
1988	20.9	5.1	1.4	chr12	47396654	47397090	(85878219)	C	MSTB2	LTR/ERVL-MaLR	(3)	454	1	843657
10595	14.3	5.0	1.5	chr12	47397124	47398232	(85877077)	+	L1PA16	LINE/L1	750	1930	(4923)	843658
465	27.5	11.9	11.0	chr12	47709027	47709199	(85566110)	C	MIR	SINE/MIR	(81)	181	1	844079
220	32.6	9.4	2.9	chr12	47812744	47812882	(85462427)	C	MIRb	SINE/MIR	(116)	152	4	844235
15	7.9	7.4	0.0	chr12	47820442	47820468	(85454841)	+	(AC)n	Simple_repeat	1	29	(0)	844248
14	26.8	1.3	6.4	chr12	47820670	47820746	(85454563)	+	(CCCTCC)n	Simple_repeat	1	78	(0)	844249
1269	24.7	2.4	4.7	chr12	47838983	47839322	(85435987)	+	LTR16A	LTR/ERVL	120	451	(0)	844283
2338	10.4	0.0	0.0	chr12	48103931	48104227	(85171082)	+	AluSg	SINE/Alu	1	297	(13)	844706
32	19.5	1.4	1.4	chr12	48104235	48104256	(85171053)	+	GA-rich	Low_complexity	1	36	(34)	844707
19	11.7	0.0	0.0	chr12	48104257	48104284	(85171025)	+	(G)n	Simple_repeat	1	28	(0)	844708
32	19.5	1.4	1.4	chr12	48104285	48104303	(85171006)	+	GA-rich	Low_complexity	37	70	(0)	844707
268	24.3	18.3	0.9	chr12	48104550	48104657	(85170652)	C	L2c	LINE/L2	(0)	3387	3257	844709
373	30.0	16.4	1.2	chr12	48106523	48106687	(85168622)	C	MIR3	SINE/MIR	(7)	201	7	844710
17	8.0	0.0	0.0	chr12	48106703	48106729	(85168580)	+	(CAAA)n	Simple_repeat	1	27	(0)	844711
29	6.3	0.0	0.0	chr12	48212621	48212654	(85062655)	+	(TC)n	Simple_repeat	1	34	(0)	844874
54	2.0	0.0	0.0	chr12	48212672	48212722	(85062587)	+	(GT)n	Simple_repeat	1	51	(0)	844875
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
16	10.7	0.0	3.1	chr12	49187899	49187934	(84087375)	+	(GGGGC)n	Simple_repeat	1	34	(0)	846615
23	11.2	0.0	0.0	chr12	49188009	49188047	(84087262)	+	(CACA)n	Simple_repeat	1	39	(0)	846616
43	2.5	0.0	0.0	chr12	49188073	49188113	(84087196)	+	(CA)n	Simple_repeat	1	41	(0)	846617
14	16.4	0.0	5.3	chr12	49337136	49337173	(83938136)	+	(TCCC)n	Simple_repeat	1	38	(0)	846988
50	2.2	0.0	0.0	chr12	49337717	49337763	(83937546)	+	(GT)n	Simple_repeat	1	47	(0)	846989
35	0.0	0.0	0.0	chr12	49337764	49337793	(83937516)	+	(GA)n	Simple_repeat	1	30	(0)	846990
25	24.8	1.8	9.0	chr12	49337821	49337992	(83937317)	+	(AGAGAC)n	Simple_repeat	1	159	(0)	846991
17	20.5	0.0	9.5	chr12	49623347	49623420	(83651889)	+	G-rich	Low_complexity	1	74	(0)	847520
18	21.1	3.5	6.7	chr12	49623704	49623790	(83651519)	+	G-rich	Low_complexity	1	90	(0)	847521
17	16.3	6.8	3.2	chr12	49707425	49707483	(83567826)	+	(CCGCG)n	Simple_repeat	1	63	(0)	847645
13	29.6	0.0	3.5	chr12	49707465	49707521	(83567788)	+	(CCCT)n	Simple_repeat	1	57	(0)	847646
16	16.5	0.0	0.0	chr12	49828079	49828105	(83447204)	+	G-rich	Low_complexity	1	27	(0)	847878
13	15.4	0.0	3.2	chr12	49828133	49828163	(83447146)	+	GA-rich	Low_complexity	1	31	(0)	847879
11	20.8	0.0	2.9	chr12	49828456	49828490	(83446819)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	847880
1414	13.1	2.5	7.9	chr12	49921069	49921320	(83353989)	+	AluJr	SINE/Alu	40	277	(35)	848054
86	28.5	2.1	2.6	chr12	49921344	49921672	(83353637)	+	GA-rich	Low_complexity	1	327	(0)	848055
818	26.0	7.2	2.8	chr12	50055587	50055839	(83219470)	C	MIRb	SINE/MIR	(0)	268	4	848343
12	11.7	7.3	4.5	chr12	50055854	50055894	(83219415)	+	(CCTCA)n	Simple_repeat	1	44	(0)	848344
17	24.8	3.5	0.0	chr12	50085265	50085321	(83189988)	+	G-rich	Low_complexity	1	59	(0)	848385
14	15.8	0.0	5.1	chr12	50085553	50085591	(83189718)	+	G-rich	Low_complexity	1	39	(0)	848386
446	24.5	11.1	3.2	chr12	51270841	51271022	(82004287)	+	MIRb	SINE/MIR	5	202	(6)	850996
244	31.9	11.9	7.9	chr12	51320371	51320764	(81954545)	+	L2c	LINE/L2	2968	3379	(8)	851120
34	3.0	0.0	0.0	chr12	51320937	51320970	(81954339)	+	(AC)n	Simple_repeat	1	34	(0)	851121
16	21.9	4.7	0.0	chr12	52037162	52037204	(81238105)	+	(GC)n	Simple_repeat	1	45	(0)	852349
564	26.0	10.7	3.4	chr12	52127409	52127617	(81147692)	+	MIR	SINE/MIR	40	261	(1)	852474
339	32.5	14.3	3.0	chr12	52878866	52879204	(80396105)	C	L2b	LINE/L2	(1)	3374	2991	853567
203	26.8	1.4	4.0	chr12	52879338	52879411	(80395898)	+	MIRc	SINE/MIR	1	75	(193)	853568
40	2.3	0.0	2.2	chr12	52903845	52903890	(80371419)	+	(CCACC)n	Simple_repeat	1	46	(0)	853627
17	13.1	0.0	0.0	chr12	52904129	52904154	(80371155)	+	(A)n	Simple_repeat	1	26	(0)	853628
12	12.2	3.7	0.0	chr12	52907323	52907349	(80367960)	+	G-rich	Low_complexity	1	28	(0)	853633
854	5.0	0.0	0.0	chr12	52908226	52908324	(80366985)	C	AluYc	SINE/Alu	(12)	287	189	853634
2240	18.5	3.2	2.8	chr12	52908370	52908724	(80366585)	+	L1MB8	LINE/L1	5704	6072	(106)	853635
1583	15.2	0.0	8.8	chr12	53005392	53005720	(80269589)	+	AluJr	SINE/Alu	10	309	(3)	853907
2109	9.8	0.3	2.4	chr12	53005753	53006047	(80269262)	+	AluSq2	SINE/Alu	1	289	(24)	853908
1060	15.2	8.1	3.3	chr12	53035203	53035356	(80239953)	C	AluJb	SINE/Alu	(10)	302	133	853972
2580	7.4	0.0	0.0	chr12	53035357	53035667	(80239642)	C	AluY	SINE/Alu	(0)	311	1	853973
1060	15.2	8.1	3.3	chr12	53035668	53035723	(80239586)	C	AluJb	SINE/Alu	(181)	131	81	853972
1764	11.9	11.2	0.0	chr12	53035823	53036083	(80239226)	C	AluSg	SINE/Alu	(16)	294	1	853974
265	19.6	0.0	1.9	chr12	53116015	53116066	(80159243)	C	MIR	SINE/MIR	(132)	130	80	854075
6068	1.9	0.6	0.4	chr12	53122340	53123036	(80152273)	C	SVA_D	Retroposon/SVA	(4)	1382	406	854092
892	12.0	0.0	0.8	chr12	53147998	53148122	(80127187)	C	AluJb	SINE/Alu	(187)	125	2	854153
949	11.3	0.7	0.0	chr12	53148203	53148335	(80126974)	C	AluSx3	SINE/Alu	(2)	309	176	854154
2297	8.0	2.0	0.3	chr12	53148425	53148725	(80126584)	+	AluSp	SINE/Alu	2	307	(6)	854155
2292	10.7	0.0	0.7	chr12	53250848	53251157	(80024152)	C	AluSx1	SINE/Alu	(4)	308	1	854340
680	28.2	11.0	6.6	chr12	53251158	53251415	(80023894)	C	L2a	LINE/L2	(284)	3142	2831	854337
315	26.2	13.2	0.4	chr12	53251411	53251531	(80023778)	C	MIR	SINE/MIR	(131)	137	8	854341
14	15.3	2.6	2.6	chr12	53380190	53380227	(79895082)	+	(GTCCGC)n	Simple_repeat	1	39	(0)	854630
18	7.0	0.0	5.9	chr12	53380385	53380418	(79894891)	+	(GCG)n	Simple_repeat	1	34	(0)	854631
12	18.0	5.0	2.4	chr12	53423881	53423920	(79851389)	+	(GCT)n	Simple_repeat	1	42	(0)	854728
13	20.3	0.0	4.7	chr12	53493035	53493077	(79782232)	+	G-rich	Low_complexity	1	43	(0)	854860
11	27.2	2.0	2.0	chr12	53493221	53493270	(79782039)	+	G-rich	Low_complexity	1	51	(0)	854861
11	18.4	11.3	2.5	chr12	53493443	53493513	(79781796)	+	A-rich	Low_complexity	1	79	(0)	854862
24	16.6	3.7	0.0	chr12	53499492	53499545	(79775764)	+	(CCT)n	Simple_repeat	1	56	(0)	854871
16	13.3	0.0	9.8	chr12	53938781	53938831	(79336478)	+	G-rich	Low_complexity	1	51	(0)	855692
28	25.1	0.0	1.3	chr12	53938973	53939049	(79336260)	+	(GCG)n	Simple_repeat	1	77	(0)	855693
16	5.3	0.0	0.0	chr12	53977729	53977748	(79297561)	+	(TG)n	Simple_repeat	1	20	(0)	855726
14	18.9	6.0	1.9	chr12	53978442	53978491	(79296818)	+	(CACCC)n	Simple_repeat	1	53	(0)	855727
20	3.1	6.1	0.0	chr12	53984866	53984898	(79290411)	+	(ACCCCC)n	Simple_repeat	1	35	(0)	855734
13	29.7	5.6	0.0	chr12	53995957	53996027	(79279282)	+	G-rich	Low_complexity	1	75	(0)	855739
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
11	21.6	0.0	4.9	chr12	54018715	54018755	(79256554)	+	(ACGCAC)n	Simple_repeat	1	41	(0)	855762
16	13.1	0.0	0.0	chr12	54019166	54019190	(79256119)	+	(C)n	Simple_repeat	1	25	(0)	855763
2384	7.3	0.7	1.7	chr12	54296128	54296429	(78978880)	+	AluSx	SINE/Alu	4	302	(10)	856192
11	21.2	2.5	2.4	chr12	54379221	54379260	(78896049)	+	(GGCCCG)n	Simple_repeat	1	41	(0)	856341
30	0.0	0.0	0.0	chr12	54379274	54379301	(78896008)	+	(GGGACA)n	Simple_repeat	1	28	(0)	856342
12	30.5	0.0	5.6	chr12	54391299	54391369	(78883940)	+	G-rich	Low_complexity	1	71	(0)	856367
20	20.6	0.0	0.0	chr12	54391631	54391669	(78883640)	+	G-rich	Low_complexity	1	39	(0)	856368
20	13.0	0.0	0.0	chr12	54419093	54419127	(78856182)	+	(GCA)n	Simple_repeat	1	35	(0)	856408
17	29.1	0.0	1.7	chr12	54419128	54419146	(78856163)	+	(GGCGGC)n	Simple_repeat	5	58	(0)	856409
17	8.9	0.0	0.0	chr12	55742515	55742538	(77532771)	+	(C)n	Simple_repeat	1	24	(0)	858160
15	5.6	0.0	0.0	chr12	55830816	55830834	(77444475)	+	(CG)n	Simple_repeat	1	19	(0)	858324
22	15.1	0.0	0.0	chr12	55830834	55830870	(77444439)	+	(CA)n	Simple_repeat	1	37	(0)	858325
12	25.4	1.6	6.2	chr12	56007537	56007599	(77267710)	+	(GCC)n	Simple_repeat	1	64	(0)	858708
23	3.7	0.0	0.0	chr12	56010028	56010055	(77265254)	+	(TC)n	Simple_repeat	1	28	(0)	858710
12	31.4	0.0	1.9	chr12	56020985	56021037	(77254272)	+	(CCCT)n	Simple_repeat	1	53	(0)	858729
17	20.5	2.6	0.0	chr12	56021021	56021059	(77254250)	+	(TC)n	Simple_repeat	1	40	(0)	858730
26	10.8	2.4	0.0	chr12	56021254	56021294	(77254015)	+	(CT)n	Simple_repeat	1	42	(0)	858731
30	5.5	2.6	0.0	chr12	56021295	56021332	(77253977)	+	(CA)n	Simple_repeat	1	39	(0)	858732
423	16.9	3.3	1.1	chr12	56041395	56041484	(77233825)	+	MIR	SINE/MIR	138	229	(33)	858763
244	23.4	3.6	7.5	chr12	56041449	56041545	(77233764)	C	L2c	LINE/L2	(16)	3410	3297	858764
16	17.3	2.6	0.0	chr12	56158139	56158177	(77117132)	+	(CCCCCGA)n	Simple_repeat	1	40	(0)	858993
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
1836	10.4	0.0	1.2	chr12	56644327	56644566	(76630743)	+	AluSx	SINE/Alu	2	238	(74)	859944
693	23.3	9.2	4.0	chr12	56725876	56726175	(76549134)	+	LTR24B	LTR/ERV1	252	568	(8)	860120
241	22.1	4.2	1.4	chr12	56726202	56726270	(76549039)	C	Charlie24	DNA/hAT-Charlie	(50)	2400	2330	860121
11	29.5	1.6	3.2	chr12	57086554	57086614	(76188695)	+	(TCTTTG)n	Simple_repeat	1	62	(0)	860678
13	25.4	0.0	4.0	chr12	57087704	57087753	(76187556)	+	(CCCGC)n	Simple_repeat	1	50	(0)	860679
17	27.1	4.1	1.3	chr12	57089052	57089124	(76186185)	+	(GCGGAG)n	Simple_repeat	1	76	(0)	860682
37	0.0	0.0	0.0	chr12	57112147	57112178	(76163131)	+	(AC)n	Simple_repeat	1	32	(0)	860716
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
17	24.5	3.0	2.9	chr12	57128414	57128479	(76146830)	+	(TCCC)n	Simple_repeat	1	68	(0)	860760
15	19.9	0.0	0.0	chr12	57128601	57128629	(76146680)	+	(C)n	Simple_repeat	1	29	(0)	860761
12	21.8	2.9	0.0	chr12	57128853	57128886	(76146423)	+	GA-rich	Low_complexity	1	35	(0)	860762
27	26.5	4.2	1.0	chr12	57221949	57222044	(76053265)	+	GA-rich	Low_complexity	1	100	(0)	860869
14	14.9	2.4	4.8	chr12	57222343	57222383	(76052926)	+	(CCTGCC)n	Simple_repeat	1	42	(0)	860870
1617	15.0	6.2	0.0	chr12	57429451	57429723	(75845586)	+	AluJb	SINE/Alu	3	293	(19)	861298
20	17.4	0.0	2.1	chr12	57430479	57430525	(75844784)	+	(CCGCCCC)n	Simple_repeat	1	47	(0)	861299
12	17.9	3.1	0.0	chr12	57460123	57460154	(75815155)	+	(CCACC)n	Simple_repeat	1	33	(0)	861366
13	17.8	0.0	6.8	chr12	57460146	57460189	(75815120)	+	(CCCAG)n	Simple_repeat	1	44	(0)	861367
11	27.7	0.0	0.0	chr12	57460155	57460161	(75815148)	+	(CCCACAC)n	Simple_repeat	1	39	(0)	861368
17	15.4	0.0	2.6	chr12	57520767	57520804	(75754505)	+	GA-rich	Low_complexity	1	38	(0)	861459
12	11.9	2.3	8.9	chr12	57520866	57520909	(75754400)	+	G-rich	Low_complexity	1	45	(0)	861460
2423	7.7	0.3	0.6	chr12	57521181	57521493	(75753816)	+	AluSz	SINE/Alu	1	312	(0)	861461
22	31.3	1.7	3.4	chr12	57523024	57523140	(75752169)	+	(CCCCGC)n	Simple_repeat	1	119	(0)	861464
19	11.7	0.0	0.0	chr12	57529419	57529446	(75745863)	+	(C)n	Simple_repeat	1	28	(0)	861467
12	13.7	6.2	0.0	chr12	57611743	57611774	(75663535)	+	(CCTC)n	Simple_repeat	1	34	(0)	861582
13	8.5	0.0	3.7	chr12	57611811	57611837	(75663472)	+	(CGCCC)n	Simple_repeat	1	27	(0)	861583
186	27.5	0.0	0.0	chr12	57612119	57612158	(75663151)	+	L3	LINE/CR1	4051	4090	(9)	861584
18	17.1	2.9	7.1	chr12	57754990	57755064	(75520245)	+	(CTCCC)n	Simple_repeat	1	71	(0)	861785
318	24.8	11.3	4.3	chr12	57782246	57782384	(75492925)	+	L2c	LINE/L2	3277	3426	(0)	861816
252	27.1	2.0	4.0	chr12	57782459	57782558	(75492751)	+	MIRc	SINE/MIR	168	265	(3)	861818
2017	8.2	2.4	1.4	chr12	57843916	57844209	(75431100)	+	AluSx	SINE/Alu	1	297	(15)	861911
25	13.5	11.0	0.0	chr12	57846447	57846453	(75428856)	+	(GCTGG)n	Simple_repeat	1	80	(0)	861915
27	11.7	0.0	7.7	chr12	57846454	57846518	(75428791)	+	G-rich	Low_complexity	1	65	(0)	861916
631	15.6	17.1	0.6	chr12	62602047	62602207	(70673102)	+	MER53	DNA/hAT	1	193	(0)	868190
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
13	21.4	4.7	0.0	chr12	64404711	64404753	(68870556)	+	(CCGCT)n	Simple_repeat	1	45	(0)	871078
6339	21.2	5.6	8.7	chr12	64767289	64768073	(68507236)	+	ERV3-16A3_I-int	LTR/ERVL	2184	2920	(2306)	871781
2491	6.7	0.0	0.7	chr12	66170196	66170494	(67104815)	C	AluSc8	SINE/Alu	(14)	297	1	873920
216	14.3	0.0	4.5	chr12	66170648	66170691	(67104618)	C	MIR	SINE/MIR	(0)	262	221	873921
225	28.0	23.9	1.6	chr12	66170688	66170872	(67104437)	C	L2c	LINE/L2	(235)	3152	2914	873922
1940	14.2	1.0	0.3	chr12	68605771	68606058	(64669251)	+	AluJb	SINE/Alu	7	296	(16)	877703
35	18.3	4.4	1.1	chr12	68606059	68606148	(64669161)	+	GA-rich	Low_complexity	1	94	(0)	877704
780	23.2	0.6	6.8	chr12	68606220	68606304	(64669005)	C	MER45A	DNA/hAT-Tip100	(0)	178	102	877705
2456	6.7	0.0	0.3	chr12	68606305	68606603	(64668706)	+	AluSx1	SINE/Alu	1	298	(14)	877706
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
14	26.2	1.7	3.4	chr12	70243653	70243710	(63031599)	+	GA-rich	Low_complexity	1	59	(0)	880616
14	23.2	3.9	1.9	chr12	70243682	70243733	(63031576)	+	(GGT)n	Simple_repeat	1	54	(0)	880617
2348	9.7	0.3	0.3	chr12	71685453	71685762	(61589547)	+	AluSx	SINE/Alu	1	310	(2)	882667
735	29.5	8.1	2.7	chr12	75781344	75781839	(57493470)	+	LTR85a	LTR/Gypsy?	268	777	(7)	888081
282	30.8	6.1	5.3	chr12	75781872	75781984	(57493325)	+	MamTip2	DNA/hAT-Tip100	37	150	(155)	888082
3510	19.0	1.2	2.2	chr12	75782024	75782749	(57492560)	+	L1MB2	LINE/L1	5449	6167	(4)	888083
12	15.3	5.3	2.5	chr12	79934885	79934922	(53340387)	+	(CGCTTC)n	Simple_repeat	1	40	(0)	894281
20896	12.5	6.3	5.9	chr12	83117932	83122848	(50152461)	C	L1PB1	LINE/L1	(1756)	5106	6	898703
15	16.6	2.2	4.3	chr12	83195951	83195977	(50079332)	+	(TA)n	Simple_repeat	2	27	(0)	898804
2057	11.0	1.3	5.0	chr12	83196170	83196487	(50078822)	+	AluSx3	SINE/Alu	2	307	(4)	898805
3299	15.3	6.9	1.2	chr12	83196556	83197116	(50078193)	C	MER41E	LTR/ERV1	(0)	595	1	898806
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
11	13.2	5.7	2.7	chr12	89709428	89709462	(43565847)	+	G-rich	Low_complexity	1	37	(0)	907477
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
688	28.1	8.1	14.1	chr12	89827523	89827904	(43447405)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	193	907648
504	16.7	10.2	0.0	chr12	89827985	89828098	(43447211)	+	MIR	SINE/MIR	78	204	(58)	907649
3651	19.9	2.0	7.8	chr12	91681456	91682267	(41593042)	+	L1M4c	LINE/L1	22	785	(5599)	910280
232	32.3	0.0	0.0	chr12	92358868	92358932	(40916377)	C	BLACKJACK	DNA/hAT-Blackjack	(2895)	74	10	911411
438	24.7	18.4	0.0	chr12	92359440	92359629	(40915680)	+	MIRc	SINE/MIR	20	252	(16)	911412
2273	16.9	0.0	4.6	chr12	93177670	93177778	(40097531)	C	L1MB7	LINE/L1	(246)	5938	5836	912882
3646	13.8	4.0	2.3	chr12	93177779	93178347	(40096962)	+	LTR19B	LTR/ERV1	1	579	(1)	912883
14	21.8	5.5	1.7	chr12	93571799	93571853	(39703456)	+	(CCCCTC)n	Simple_repeat	1	58	(0)	913739
17	8.2	0.0	0.0	chr12	93571879	93571904	(39703405)	+	(GCG)n	Simple_repeat	1	26	(0)	913740
14	22.0	0.0	0.0	chr12	93571905	93571915	(39703394)	+	(GCCGAG)n	Simple_repeat	1	37	(0)	913741
229	36.9	5.4	1.7	chr12	94101215	94101393	(39173916)	+	Tigger19a	DNA/TcMar-Tigger	27	212	(111)	914667
13	4.9	0.0	4.3	chr12	96399430	96399452	(36875857)	+	(CTC)n	Simple_repeat	1	23	(0)	918976
15	23.2	0.0	8.4	chr12	96399871	96399941	(36875368)	+	(GCCCCC)n	Simple_repeat	1	71	(0)	918977
28	11.5	1.6	4.8	chr12	96400596	96400657	(36874652)	+	G-rich	Low_complexity	1	63	(0)	918978
2182	8.1	0.3	9.6	chr12	98502720	98503041	(34772268)	+	AluSz	SINE/Alu	1	292	(20)	922373
14	25.4	0.0	6.3	chr12	98516105	98516167	(34759142)	+	G-rich	Low_complexity	1	63	(0)	922401
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
620	31.4	13.2	4.1	chr12	103955936	103956522	(29318787)	C	L2a	LINE/L2	(2)	3424	2769	931597
454	13.4	0.0	0.0	chr12	103956534	103956600	(29318709)	C	MSTA1	LTR/ERVL-MaLR	(13)	452	386	931598
1867	16.5	5.0	0.0	chr12	104057250	104057534	(29217775)	+	AluJb	SINE/Alu	1	300	(12)	931780
1294	17.8	1.6	0.0	chr12	104057535	104057781	(29217528)	+	Tigger6b	DNA/TcMar-Tigger	1347	1597	(0)	931781
4135	13.3	3.7	2.1	chr12	104057802	104058513	(29216796)	C	L1M3f	LINE/L1	(4595)	733	10	931782
7717	7.5	0.9	1.5	chr12	104293662	104294674	(28980635)	C	LTR13	LTR/ERVK	(0)	1007	1	932295
529	23.7	11.5	1.7	chr12	104479923	104480094	(28795215)	C	MLT1J	LTR/ERVL-MaLR	(321)	191	1	932669
1701	22.2	7.2	4.2	chr12	104480205	104480297	(28795012)	+	MLT1C	LTR/ERVL-MaLR	21	123	(344)	932671
2430	7.7	0.0	0.7	chr12	104480298	104480597	(28794712)	+	AluSg4	SINE/Alu	3	300	(10)	932672
203	26.4	9.4	5.4	chr12	104566121	104566232	(28709077)	+	MIR	SINE/MIR	69	185	(77)	932848
18	17.4	2.1	2.1	chr12	105946271	105946317	(27328992)	+	(TTTA)n	Simple_repeat	1	48	(0)	935308
23	28.5	1.3	0.0	chr12	106774607	106774682	(26500627)	+	GA-rich	Low_complexity	1	77	(0)	936818
554	18.3	3.4	0.0	chr12	106956654	106956768	(26318541)	C	MamRep1879	DNA/hAT-Tip100?	(90)	126	8	937154
34	3.0	0.0	0.0	chr12	108253828	108253861	(25021448)	+	(AG)n	Simple_repeat	1	34	(0)	939860
15	5.5	0.0	0.0	chr12	108253865	108253883	(25021426)	+	(G)n	Simple_repeat	1	19	(0)	939861
212	20.8	2.0	0.0	chr12	108253940	108253987	(25021322)	+	L2a	LINE/L2	3361	3409	(17)	939862
196	32.0	5.5	0.0	chr12	108253992	108254144	(25021165)	C	L2a	LINE/L2	(733)	2686	2525	939856
204	22.2	0.0	0.0	chr12	108474921	108474956	(24800353)	+	L2b	LINE/L2	3339	3374	(1)	940374
2123	9.2	0.6	8.9	chr12	108474968	108475304	(24800005)	+	AluSz	SINE/Alu	1	309	(3)	940375
231	16.2	0.0	0.0	chr12	108475479	108475515	(24799794)	C	MLT1O	LTR/ERVL-MaLR	(350)	192	156	940376
1529	22.3	7.8	5.1	chr12	108475587	108475998	(24799311)	+	LTR16C	LTR/ERVL	66	489	(0)	940377
289	27.4	8.8	1.5	chr12	108563914	108564050	(24711259)	C	MARNA	DNA/TcMar-Mariner	(232)	354	207	940539
54	0.0	0.0	0.0	chr12	108628319	108628364	(24646945)	+	(AC)n	Simple_repeat	1	46	(0)	940703
496	21.7	6.5	4.3	chr12	108628808	108628975	(24646334)	+	MIR	SINE/MIR	18	193	(69)	940704
59	12.1	4.1	2.3	chr12	110124162	110124284	(23151025)	+	(GCCCC)n	Simple_repeat	1	128	(0)	944095
15	28.0	0.0	0.0	chr12	110124288	110124326	(23150983)	+	(GC)n	Simple_repeat	1	39	(0)	944096
14	24.3	5.6	2.7	chr12	110583338	110583408	(22691901)	+	(CAGCCC)n	Simple_repeat	1	75	(0)	945047
315	25.4	16.7	0.0	chr12	110583732	110583861	(22691448)	C	MamRep488	DNA/hAT-Tip100	(1)	218	63	945048
185	28.1	0.0	5.0	chr12	110583900	110583959	(22691350)	+	L2a	LINE/L2	3013	3069	(306)	945049
16	20.3	0.0	0.0	chr12	110742795	110742829	(22532480)	+	(GGC)n	Simple_repeat	1	35	(0)	945398
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
2281	10.0	0.3	0.3	chr12	111637053	111637353	(21637956)	C	AluSx1	SINE/Alu	(11)	301	1	947563
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
20	19.6	1.5	6.0	chr12	116277602	116277668	(16997641)	+	(TCC)n	Simple_repeat	1	64	(0)	957622
21	24.9	1.4	2.8	chr12	116277749	116277818	(16997491)	+	(GGC)n	Simple_repeat	1	71	(0)	957623
17	10.8	0.0	0.0	chr12	116277869	116277898	(16997411)	+	(GAGG)n	Simple_repeat	1	30	(0)	957624
48	4.1	0.0	0.0	chr12	116359284	116359333	(16915976)	+	(TG)n	Simple_repeat	1	50	(0)	957830
1822	11.9	0.0	0.4	chr12	116385468	116385710	(16889599)	C	AluSx	SINE/Alu	(42)	270	29	957900
15	10.6	4.3	6.2	chr12	116533801	116533846	(16741463)	+	(GGCTGG)n	Simple_repeat	1	48	(0)	958309
18	7.2	3.3	0.0	chr12	116534059	116534088	(16741221)	+	(CTC)n	Simple_repeat	1	31	(0)	958310
13	17.8	5.3	0.0	chr12	116534396	116534433	(16740876)	+	(CCCCT)n	Simple_repeat	1	40	(0)	958311
13	16.1	0.0	0.0	chr12	116599588	116599615	(16675694)	+	(GGCC)n	Simple_repeat	1	28	(0)	958485
17	10.2	6.5	4.1	chr12	116599736	116599781	(16675528)	+	(CCCA)n	Simple_repeat	1	49	(0)	958486
919	13.5	11.9	3.5	chr12	116609748	116609947	(16665362)	C	MER20	DNA/hAT-Charlie	(0)	219	1	958517
2340	9.7	0.0	0.3	chr12	116610010	116610308	(16665001)	C	AluSq2	SINE/Alu	(15)	298	1	958518
520	26.1	6.8	2.1	chr12	117671402	117671542	(15603767)	+	L2b	LINE/L2	3241	3423	(3)	960826
232	31.1	3.6	3.6	chr12	117671579	117671688	(15603621)	+	L2c	LINE/L2	3260	3369	(18)	960828
339	30.2	2.4	4.7	chr12	119665476	119665645	(13609664)	C	Helitron3Na_Mam	RC/Helitron	(88)	398	233	965288
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
2122	7.6	2.7	1.0	chr12	120292321	120292608	(12982701)	+	AluSg4	SINE/Alu	1	293	(17)	966632
517	13.3	5.1	0.0	chr12	120292742	120292816	(12982493)	+	AluYe5	SINE/Alu	212	290	(20)	966633
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
25	18.9	4.3	5.2	chr12	120469569	120469661	(12805648)	+	(CCG)n	Simple_repeat	1	97	(0)	967152
15	13.9	0.0	0.0	chr12	120495690	120495713	(12779596)	+	(G)n	Simple_repeat	1	24	(0)	967222
226	24.5	0.0	0.0	chr12	120495928	120495980	(12779329)	+	LTR71B	LTR/ERV1	309	361	(249)	967223
17	0.0	0.0	0.0	chr12	120496742	120496760	(12778549)	+	(T)n	Simple_repeat	1	19	(0)	967224
17	19.6	0.0	4.0	chr12	120496935	120496984	(12778325)	+	G-rich	Low_complexity	1	50	(0)	967225
181	34.8	0.0	2.8	chr12	120497142	120497212	(12778097)	C	MamRTE1	LINE/RTE-BovB	(1715)	2097	2029	967226
387	33.3	1.7	0.0	chr12	120583127	120583297	(12692012)	C	L1ME3	LINE/L1	(291)	5833	5660	967432
293	27.5	18.0	0.0	chr12	120583689	120583779	(12691530)	C	MIRb	SINE/MIR	(117)	151	41	967435
504	32.5	3.3	2.7	chr12	120583847	120584055	(12691254)	+	MIR	SINE/MIR	37	241	(21)	967436
22	15.1	0.0	0.0	chr12	120584056	120584092	(12691217)	+	(T)n	Simple_repeat	1	37	(0)	967437
19	26.8	1.5	1.5	chr12	120903964	120904028	(12371281)	+	(GCTG)n	Simple_repeat	1	66	(0)	968071
13	23.3	0.0	0.0	chr12	120904736	120904770	(12370539)	+	(TTCG)n	Simple_repeat	1	35	(0)	968073
960	28.0	5.7	3.6	chr12	120904855	120905306	(12370003)	C	L2a	LINE/L2	(6)	3381	2921	968074
2165	9.1	0.0	0.0	chr12	121128481	121128754	(12146555)	+	AluSx	SINE/Alu	1	274	(38)	968634
515	17.9	10.4	18.2	chr12	121128755	121128917	(12146392)	C	LTR16C	LTR/ERVL	(150)	339	198	968633
37	25.0	2.1	0.0	chr12	121128943	121129035	(12146274)	+	(TC)n	Simple_repeat	1	95	(0)	968635
516	27.9	11.5	6.7	chr12	121129037	121129482	(12145827)	+	MLT1O	LTR/ERVL-MaLR	53	522	(20)	968636
1704	11.7	8.4	2.1	chr12	121209583	121209753	(12065556)	C	AluJr	SINE/Alu	(1)	311	139	968857
28	0.0	0.0	0.0	chr12	121209754	121209780	(12065529)	+	(T)n	Simple_repeat	1	27	(0)	968858
1704	11.7	8.4	2.1	chr12	121209781	121209899	(12065410)	C	AluJr	SINE/Alu	(174)	138	1	968857
2194	12.9	1.0	0.0	chr12	121493848	121494156	(11781153)	C	AluSx	SINE/Alu	(0)	312	1	969519
13	13.1	8.9	4.9	chr12	121494249	121494304	(11781005)	+	GA-rich	Low_complexity	1	61	(0)	969520
12	28.7	0.0	0.0	chr12	121580126	121580167	(11695142)	+	A-rich	Low_complexity	1	42	(0)	969720
20	10.8	5.0	0.0	chr12	121580570	121580609	(11694700)	+	G-rich	Low_complexity	1	42	(0)	969721
345	24.8	5.7	8.9	chr12	121776746	121776790	(11498519)	+	MER102b	DNA/hAT-Charlie	38	79	(262)	970308
1762	14.2	2.9	4.2	chr12	121776791	121776954	(11498355)	C	AluJr	SINE/Alu	(6)	306	143	970309
2183	10.0	3.4	0.3	chr12	121776955	121777119	(11498190)	C	AluSc8	SINE/Alu	(12)	299	136	970310
14	9.3	0.0	0.0	chr12	121804672	121804694	(11470615)	+	(GCC)n	Simple_repeat	1	23	(0)	970355
15	16.9	0.0	2.9	chr12	121804750	121804784	(11470525)	+	(CAC)n	Simple_repeat	1	35	(0)	970356
20	13.9	0.0	0.0	chr12	121805690	121805721	(11469588)	+	(T)n	Simple_repeat	1	32	(0)	970357
16	18.7	0.0	4.3	chr12	121805722	121805735	(11469574)	+	(TTATTTT)n	Simple_repeat	1	46	(0)	970358
30	13.9	0.0	0.0	chr12	121807445	121807492	(11467817)	+	(A)n	Simple_repeat	1	48	(0)	970359
463	33.8	2.9	3.9	chr12	121812309	121812514	(11462795)	+	MIRb	SINE/MIR	50	253	(15)	970364
24	12.2	0.0	0.0	chr12	121812752	121812788	(11462521)	+	(GT)n	Simple_repeat	1	37	(0)	970365
1496	17.2	10.8	1.5	chr12	122503800	122504067	(10771242)	+	AluJr	SINE/Alu	1	296	(16)	972013
2174	14.2	1.0	1.0	chr12	122504346	122504647	(10770662)	+	AluSx	SINE/Alu	1	302	(10)	972014
1745	10.8	5.2	6.8	chr12	122863884	122864178	(10411131)	C	AluSz	SINE/Alu	(22)	290	1	972828
323	31.6	10.2	0.0	chr12	122864360	122864536	(10410773)	C	L4_A_Mam	LINE/RTE-X	(167)	4823	4627	972829
212	24.2	3.0	1.5	chr12	122888844	122888910	(10386399)	+	L2	LINE/L2	2342	2409	(1010)	972871
14	13.7	4.5	4.3	chr12	122888958	122889001	(10386308)	+	(CCCTCC)n	Simple_repeat	1	46	(0)	972872
293	29.9	13.7	0.0	chr12	122889047	122889227	(10386082)	C	L2b	LINE/L2	(3)	3372	3191	972873
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
829	10.4	0.0	7.5	chr12	123233964	123234097	(10041212)	C	FLAM_C	SINE/Alu	(15)	128	5	973592
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
15	24.3	1.8	3.5	chr12	123364930	123364986	(9910323)	+	(CTCC)n	Simple_repeat	1	58	(0)	973886
433	18.7	0.0	0.0	chr12	123435771	123435845	(9839464)	+	MER5A	DNA/hAT-Charlie	1	75	(114)	974079
905	15.2	0.0	0.0	chr12	123435846	123435977	(9839332)	+	FLAM_C	SINE/Alu	1	132	(11)	974080
12	13.0	0.0	3.6	chr12	123435979	123436006	(9839303)	+	GA-rich	Low_complexity	1	28	(0)	974081
21	20.4	0.0	0.0	chr12	123436354	123436401	(9838908)	+	(CCT)n	Simple_repeat	1	48	(0)	974082
33	2.9	0.0	0.0	chr12	123533721	123533755	(9741554)	+	(GGC)n	Simple_repeat	1	35	(0)	974334
51	22.1	4.2	4.9	chr12	123533756	123533787	(9741522)	+	G-rich	Low_complexity	181	212	(0)	974335
2007	10.2	0.3	1.4	chr12	123711762	123712046	(9563263)	+	AluSx	SINE/Alu	1	282	(30)	974779
22	3.4	0.0	5.9	chr12	123712062	123712095	(9563214)	+	(CA)n	Simple_repeat	1	34	(0)	974780
15	32.2	0.0	1.6	chr12	123712361	123712423	(9562886)	+	(GCG)n	Simple_repeat	1	63	(0)	974781
34	23.6	6.7	1.9	chr12	123973003	123973151	(9302158)	+	G-rich	Low_complexity	1	159	(0)	975250
14	17.0	0.0	6.7	chr12	123973395	123973439	(9301870)	+	G-rich	Low_complexity	1	45	(0)	975251
1881	12.2	3.0	4.0	chr12	124053368	124053670	(9221639)	+	AluJb	SINE/Alu	1	300	(12)	975364
260	34.5	6.6	8.9	chr12	124054438	124054717	(9220592)	C	L2c	LINE/L2	(8)	3379	3107	975365
234	34.5	2.7	2.1	chr12	124240383	124240527	(9034782)	C	L2c	LINE/L2	(482)	2937	2792	975740
1038	25.1	12.4	3.6	chr12	124240546	124240934	(9034375)	+	MLT1J2	LTR/ERVL-MaLR	3	430	(18)	975741
332	22.3	15.6	1.0	chr12	124723492	124723595	(8551714)	C	MER103C	DNA/hAT-Charlie	(42)	255	134	976671
2311	11.8	0.0	0.3	chr12	124723644	124723949	(8551360)	C	AluSz	SINE/Alu	(7)	305	1	976672
467	31.3	3.7	0.6	chr12	124723962	124724144	(8551165)	C	MIRb	SINE/MIR	(76)	192	4	976673
244	17.0	1.9	3.6	chr12	124745073	124745127	(8530182)	C	MIR3	SINE/MIR	(52)	156	103	976730
426	24.8	9.9	1.4	chr12	124745281	124745419	(8529890)	+	L2b	LINE/L2	3224	3375	(0)	976731
269	17.0	1.9	0.0	chr12	124745566	124745621	(8529688)	+	L2a	LINE/L2	3331	3426	(0)	976732
187	28.3	8.4	3.8	chr12	124864364	124864521	(8410788)	+	L2b	LINE/L2	2942	3107	(319)	976999
197	26.9	2.9	2.9	chr12	124864651	124864719	(8410590)	+	L2b	LINE/L2	3305	3373	(2)	976999
186	30.9	0.0	1.4	chr12	124864704	124864772	(8410537)	C	L2b	LINE/L2	(8)	3367	3300	976999
2478	5.1	0.3	2.9	chr12	124864800	124865110	(8410199)	+	AluSp	SINE/Alu	11	313	(0)	977000
2521	17.5	7.0	5.0	chr12	124921921	124922521	(8352788)	C	L1MA5	LINE/L1	(0)	6300	5687	977153
2318	7.5	0.3	1.4	chr12	124922550	124922842	(8352467)	C	AluSx	SINE/Alu	(22)	290	1	977154
2029	14.7	0.0	0.7	chr12	124923216	124923522	(8351787)	+	AluSz	SINE/Alu	1	305	(7)	977155
274	32.0	10.9	1.6	chr12	125183835	125184001	(8091308)	C	MIRc	SINE/MIR	(74)	194	11	977726
65	0.0	0.0	0.0	chr12	126781537	126781591	(6493718)	+	(CT)n	Simple_repeat	1	55	(0)	980388
552	23.2	0.6	9.9	chr12	130830014	130830195	(2445114)	C	L1MC5	LINE/L1	(14)	9290	9126	987277
16	14.6	4.1	3.9	chr12	130830563	130830611	(2444698)	+	(TATTTCT)n	Simple_repeat	1	51	(0)	987278
238	13.0	13.8	0.0	chr12	131229763	131229831	(2045478)	+	MER53	DNA/hAT	17	96	(97)	987881
2217	11.4	4.2	0.0	chr12	131826897	131827194	(1448115)	+	AluSx	SINE/Alu	1	311	(1)	988653
21	10.8	0.0	0.0	chr12	131827354	131827383	(1447926)	+	(G)n	Simple_repeat	1	30	(0)	988654
180	21.9	0.0	0.0	chr12	131827445	131827476	(1447833)	+	MIRc	SINE/MIR	117	148	(120)	988655
219	31.5	11.0	0.6	chr12	132421649	132421811	(853498)	C	L2	LINE/L2	(980)	2439	2258	989435
236	33.5	7.3	4.0	chr12	132421814	132422115	(853194)	C	L2	LINE/L2	(1014)	2405	2093	989436
237	16.1	12.5	0.0	chr12	132422249	132422304	(853005)	C	MLT1G1	LTR/ERVL-MaLR	(430)	149	86	989437
545	29.7	19.8	1.7	chr12	132426881	132427291	(848018)	C	L2a	LINE/L2	(1)	3425	2922	989442
12	26.3	0.0	5.5	chr12	132427525	132427579	(847730)	+	G-rich	Low_complexity	1	55	(0)	989443
206	32.4	2.9	0.0	chr12	132427583	132427650	(847659)	C	L2a	LINE/L2	(562)	2857	2788	989442
1159	26.7	8.8	3.9	chr12	132427679	132428193	(847116)	C	MLT1F2	LTR/ERVL-MaLR	(10)	550	8	989444
19	11.0	2.4	2.4	chr13	19863432	19863472	(94500856)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	993246
16	11.7	0.0	0.0	chr13	19958702	19958735	(94405593)	+	(CCT)n	Simple_repeat	1	34	(0)	993492
20	16.3	0.0	0.0	chr13	19958915	19958955	(94405373)	+	(CGGAGG)n	Simple_repeat	1	41	(0)	993493
13	14.7	3.3	0.0	chr13	19959005	19959034	(94405294)	+	(CCG)n	Simple_repeat	1	31	(0)	993494
105	24.5	3.3	0.9	chr13	21229204	21229510	(93134818)	+	(CA)n	Simple_repeat	1	317	(0)	995776
19	0.0	0.0	0.0	chr13	27620497	27620520	(86743808)	+	(CGC)n	Simple_repeat	1	24	(0)	1005251
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
46	2.3	0.0	0.0	chr13	28139508	28139551	(86224777)	+	(GT)n	Simple_repeat	1	44	(0)	1006222
15	13.7	0.0	0.0	chr13	28139552	28139575	(86224753)	+	(GGGGA)n	Simple_repeat	4	27	(0)	1006223
318	28.8	19.7	1.8	chr13	28409153	28409322	(85955006)	C	MamSINE1	SINE/tRNA-RTE	(2)	288	81	1006704
13	14.1	3.0	2.9	chr13	28755162	28755194	(85609134)	+	(CTC)n	Simple_repeat	1	34	(0)	1007291
18	27.4	1.3	4.0	chr13	30464650	30464724	(83899604)	+	(CCG)n	Simple_repeat	1	76	(0)	1009735
31	0.0	0.0	0.0	chr13	30464762	30464788	(83899540)	+	(TG)n	Simple_repeat	1	27	(0)	1009736
19	2.9	8.6	0.0	chr13	30466110	30466144	(83898184)	+	(AGAGGC)n	Simple_repeat	1	38	(0)	1009745
1885	12.2	1.4	1.1	chr13	32537791	32538069	(81826259)	+	AluSx3	SINE/Alu	1	280	(31)	1012941
16	18.1	5.8	1.8	chr13	32586783	32586834	(81777494)	+	G-rich	Low_complexity	1	55	(0)	1013053
15	8.2	0.0	3.6	chr13	32586911	32586938	(81777390)	+	(CGG)n	Simple_repeat	1	28	(0)	1013054
27	19.2	5.1	1.2	chr13	32586968	32587046	(81777282)	+	(GCCGCC)n	Simple_repeat	1	83	(0)	1013055
16	26.9	2.9	2.8	chr13	36346430	36346499	(78017829)	+	(CGC)n	Simple_repeat	1	72	(0)	1018402
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
379	27.2	3.7	0.0	chr13	41075075	41075177	(73289151)	+	MER94	DNA/hAT-Blackjack	1	107	(27)	1025187
1792	18.7	0.7	1.4	chr13	41075381	41075674	(73288654)	C	AluJr	SINE/Alu	(14)	298	7	1025188
282	31.1	3.6	9.6	chr13	44368110	44368287	(69996041)	+	X6B_LINE	LINE/CR1	900	1066	(6)	1030194
320	33.0	2.1	0.0	chr13	44368669	44368795	(69995533)	+	L2a	LINE/L2	3242	3426	(0)	1030195
15	23.1	5.8	2.7	chr13	46553067	46553135	(67811193)	+	GA-rich	Low_complexity	1	73	(0)	1034098
20	3.9	0.0	0.0	chr13	46553145	46553171	(67811157)	+	(CGC)n	Simple_repeat	1	27	(0)	1034099
22	14.2	0.0	0.0	chr13	46553466	46553504	(67810824)	+	(CAC)n	Simple_repeat	1	39	(0)	1034100
16	20.8	2.2	2.1	chr13	46553513	46553558	(67810770)	+	(CGG)n	Simple_repeat	1	47	(0)	1034101
31	18.1	0.0	0.0	chr13	49652611	49652666	(64711662)	+	G-rich	Low_complexity	1	56	(0)	1038780
12	20.7	5.1	0.0	chr13	49792354	49792392	(64571936)	+	(CCCGC)n	Simple_repeat	1	41	(0)	1039047
25	19.0	0.0	1.8	chr13	49792507	49792562	(64571766)	+	(GGC)n	Simple_repeat	1	56	(0)	1039048
22	14.9	2.2	0.0	chr13	49792569	49792613	(64571715)	+	G-rich	Low_complexity	1	46	(0)	1039049
13	27.4	0.0	6.2	chr13	49792664	49792727	(64571601)	+	G-rich	Low_complexity	1	64	(0)	1039049
75	15.5	4.7	4.1	chr13	49996819	49997027	(64367301)	+	G-rich	Low_complexity	1	210	(0)	1039473
29	3.2	0.0	0.0	chr13	51451721	51451752	(62912576)	+	(CGC)n	Simple_repeat	1	32	(0)	1041597
25	31.9	0.0	6.5	chr13	51451818	51451970	(62912358)	+	G-rich	Low_complexity	1	153	(0)	1041598
12	22.8	4.2	2.0	chr13	51452232	51452279	(62912049)	+	(GCCC)n	Simple_repeat	1	50	(0)	1041599
13	6.5	8.8	2.7	chr13	51452366	51452399	(62911929)	+	G-rich	Low_complexity	1	37	(0)	1041600
21	11.2	0.0	0.0	chr13	60397256	60397285	(53967043)	+	(T)n	Simple_repeat	1	30	(0)	1053462
14	7.3	6.9	0.0	chr13	60397311	60397348	(53966980)	+	(CACCCC)n	Simple_repeat	1	40	(0)	1053463
41	4.7	0.0	0.0	chr13	72782876	72782919	(41581409)	+	(GT)n	Simple_repeat	1	44	(0)	1069319
28	26.9	2.1	1.0	chr13	77026662	77026756	(37337572)	+	(CCGCC)n	Simple_repeat	1	97	(0)	1075600
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
5596	18.2	9.9	0.2	chr13	80645305	80646344	(33717984)	C	L1MA4A	LINE/L1	(23)	6778	5616	1080583
530	31.8	2.8	6.8	chr13	80667227	80667563	(33696765)	C	UCON28c	Unknown	(177)	391	69	1080601
9630	17.3	4.1	1.9	chr13	80803355	80806375	(33557953)	+	L1MA8	LINE/L1	4126	7229	(22)	1080762
439	36.1	11.7	3.1	chr13	89805678	89806068	(24558260)	C	L2a	LINE/L2	(25)	3401	2973	1092110
1772	28.7	0.7	1.5	chr13	90082114	90082760	(24281568)	C	L1M1	LINE/L1	(5131)	3307	2660	1092484
612	22.2	0.0	3.4	chr13	90082773	90082921	(24281407)	+	L1MA8	LINE/L1	6140	6283	(8)	1092485
37	0.0	0.0	0.0	chr13	90089503	90089534	(24274794)	+	(AC)n	Simple_repeat	1	32	(0)	1092495
1181	22.4	14.2	3.5	chr13	90089772	90090177	(24274151)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1092496
12	13.2	0.0	9.8	chr13	90300906	90300946	(24063382)	+	(AATAATT)n	Simple_repeat	1	41	(0)	1092754
327	35.1	7.0	1.7	chr13	90301108	90301510	(24062818)	+	HAL1ME	LINE/L1	1873	2298	(167)	1092755
1364	25.7	6.0	4.2	chr13	90441461	90441931	(23922397)	+	MLT1D	LTR/ERVL-MaLR	26	505	(0)	1092922
271	28.8	3.8	0.0	chr13	90442476	90442557	(23921771)	C	MIRc	SINE/MIR	(112)	156	69	1092923
2370	9.6	0.0	0.7	chr13	90442593	90442895	(23921433)	+	AluSc8	SINE/Alu	1	301	(10)	1092924
353	32.0	8.2	0.0	chr13	90630953	90631108	(23733220)	C	MIRb	SINE/MIR	(51)	217	48	1093164
217	41.0	0.8	0.8	chr13	90631255	90631372	(23732956)	+	L2b	LINE/L2	3257	3374	(1)	1093165
1805	17.6	0.7	3.5	chr13	90911166	90911484	(23452844)	+	AluJr	SINE/Alu	2	311	(1)	1093528
314	31.8	9.3	3.5	chr13	90911606	90911836	(23452492)	C	MIRb	SINE/MIR	(1)	267	22	1093529
2495	8.5	0.3	0.0	chr13	91080318	91080624	(23283704)	+	AluY	SINE/Alu	1	308	(3)	1093747
1086	20.7	0.9	1.4	chr13	91080742	91080961	(23283367)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1093748
35	8.8	0.0	0.0	chr13	91081032	91081079	(23283249)	+	(TC)n	Simple_repeat	1	48	(0)	1093749
359	34.8	6.7	6.3	chr13	91081083	91081321	(23283007)	C	MLT1J	LTR/ERVL-MaLR	(98)	414	175	1093750
17	20.7	0.0	0.0	chr13	91084305	91084343	(23279985)	+	(ATAT)n	Simple_repeat	1	39	(0)	1093753
12	13.7	6.2	0.0	chr13	91119553	91119584	(23244744)	+	A-rich	Low_complexity	1	34	(0)	1093805
1623	19.6	3.3	0.3	chr13	91325686	91325976	(23038352)	C	AluJb	SINE/Alu	(12)	300	1	1094116
1156	26.8	7.5	10.2	chr13	91325977	91326459	(23037869)	C	Tigger13a	DNA/TcMar-Tigger	(233)	538	37	1094115
3948	13.0	0.0	1.3	chr13	92360210	92360831	(22003497)	+	L1PREC2	LINE/L1	3730	4343	(1803)	1095457
340	31.5	2.9	1.8	chr13	92361050	92361217	(22003111)	C	MER102a	DNA/hAT-Charlie	(122)	208	39	1095458
211	35.2	4.3	1.1	chr13	92473241	92473329	(21890999)	C	MamSINE1	SINE/tRNA-RTE	(21)	269	178	1095619
2371	10.8	0.0	0.6	chr13	92632879	92633192	(21731136)	C	AluSx	SINE/Alu	(0)	312	1	1095838
1165	14.6	2.5	4.5	chr13	92633193	92633309	(21731019)	C	THE1B	LTR/ERVL-MaLR	(190)	174	3	1095837
305	27.9	10.9	2.3	chr13	92660546	92660721	(21703607)	C	L1MEg	LINE/L1	(5112)	972	780	1095887
589	24.5	0.0	3.0	chr13	92660764	92660927	(21703401)	+	MER3	DNA/hAT-Charlie	9	167	(42)	1095888
1699	18.5	2.3	0.0	chr13	92661019	92661310	(21703018)	+	AluJb	SINE/Alu	1	299	(13)	1095889
15	12.8	5.9	0.0	chr13	95300927	95300960	(19063368)	+	(TCC)n	Simple_repeat	1	36	(0)	1099754
13	4.3	3.9	3.7	chr13	95301318	95301343	(19062985)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1099755
1178	14.6	2.1	4.7	chr13	95722491	95722682	(18641646)	+	AluJo	SINE/Alu	1	187	(125)	1100593
790	17.6	3.0	1.5	chr13	95722683	95722813	(18641515)	+	AluJb	SINE/Alu	148	280	(32)	1100594
22	3.8	0.0	0.0	chr13	95722816	95722842	(18641486)	+	(C)n	Simple_repeat	1	27	(0)	1100595
469	19.6	12.5	2.0	chr13	95722882	95723060	(18641268)	C	MER58C	DNA/hAT-Charlie	(0)	215	2	1100596
7187	5.2	3.4	0.3	chr13	99568515	99569384	(14794944)	C	MER11D	LTR/ERVK	(0)	897	1	1106451
32	22.2	1.8	4.5	chr13	99606510	99606661	(14757667)	+	G-rich	Low_complexity	1	147	(0)	1106537
14	21.8	6.8	3.8	chr13	99606673	99606758	(14757570)	+	(GGC)n	Simple_repeat	1	88	(0)	1106538
18	20.9	3.0	4.4	chr13	99980757	99980822	(14383506)	+	GA-rich	Low_complexity	1	68	(0)	1107132
547	33.2	20.7	0.9	chr13	100675717	100676412	(13687916)	+	L2c	LINE/L2	1811	2680	(739)	1108314
1447	17.8	1.9	5.3	chr13	110609724	110610096	(3754232)	+	LOR1-int	LTR/ERV1	6375	7097	(1023)	1121502
653	19.2	2.9	8.7	chr13	110610099	110610281	(3754047)	+	MER4D0	LTR/ERV1	1	172	(700)	1121502
276	29.3	14.7	0.0	chr13	110705314	110705412	(3658916)	+	MIRb	SINE/MIR	125	240	(28)	1121624
17	18.8	5.4	1.7	chr13	110705974	110706029	(3658299)	+	(CCGCCCG)n	Simple_repeat	1	59	(0)	1121626
14	16.5	2.9	0.0	chr13	110712418	110712451	(3651877)	+	(GGCCGA)n	Simple_repeat	1	35	(0)	1121636
16	16.8	0.0	0.0	chr13	111204988	111205017	(3159311)	+	(C)n	Simple_repeat	1	30	(0)	1122294
766	27.0	4.2	9.1	chr13	112722695	112723045	(1641283)	C	MER4D	LTR/ERV1	(24)	879	547	1123870
389	19.5	2.5	0.0	chr13	112723106	112723182	(1641146)	C	MER49	LTR/ERV1	(638)	285	207	1123871
694	23.2	7.3	10.0	chr13	112723205	112723306	(1641022)	C	MER4D	LTR/ERV1	(308)	302	229	1123870
1990	11.3	0.0	0.0	chr13	112723307	112723571	(1640757)	C	AluSx	SINE/Alu	(47)	265	1	1123872
13	27.9	2.1	0.0	chr13	113209255	113209302	(1155026)	+	(GGAGCCC)n	Simple_repeat	1	49	(0)	1124329
47	18.6	5.0	2.7	chr13	113209474	113209614	(1154714)	+	G-rich	Low_complexity	1	148	(0)	1124330
15	26.3	5.5	3.1	chr13	113584448	113584538	(779790)	+	(CGCACG)n	Simple_repeat	1	96	(0)	1124892
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
2277	3.6	3.1	6.2	chr14	20342727	20343030	(86700688)	C	AluY	SINE/Alu	(17)	294	1	1127886
22	3.8	0.0	0.0	chr14	20343033	20343065	(86700653)	+	(T)n	Simple_repeat	1	33	(0)	1127887
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
1183	25.9	12.6	3.4	chr14	21040470	21040966	(86002752)	+	L2a	LINE/L2	2761	3339	(87)	1128990
26	20.4	1.4	1.4	chr14	21098235	21098303	(85945415)	+	G-rich	Low_complexity	1	70	(0)	1129079
36	3.8	3.5	3.3	chr14	21098324	21098381	(85945337)	+	(GGC)n	Simple_repeat	1	60	(0)	1129080
19	12.8	0.0	0.0	chr14	21098669	21098702	(85945016)	+	(GGAG)n	Simple_repeat	1	34	(0)	1129082
291	19.6	0.0	0.0	chr14	21098728	21098778	(85944940)	C	Plat_L3	LINE/CR1	(23)	3563	3513	1129083
340	26.9	7.3	0.8	chr14	21099082	21099206	(85944512)	C	L2b	LINE/L2	(8)	3379	3253	1129084
18	24.3	1.9	0.0	chr14	21476690	21476742	(85566976)	+	(GCCCC)n	Simple_repeat	1	54	(0)	1129819
32	0.0	0.0	0.0	chr14	22883256	22883285	(84160433)	+	(GCACAC)n	Simple_repeat	1	30	(0)	1131891
17	20.5	0.0	0.0	chr14	22883292	22883331	(84160387)	+	(ACACGG)n	Simple_repeat	1	40	(0)	1131892
17	13.8	5.0	0.0	chr14	22886947	22886986	(84156732)	+	(CCGCC)n	Simple_repeat	1	42	(0)	1131899
16	13.1	0.0	0.0	chr14	22900330	22900354	(84143364)	+	(C)n	Simple_repeat	1	25	(0)	1131926
1512	15.3	0.0	1.2	chr14	23010774	23010871	(84032847)	C	AluSx3	SINE/Alu	(9)	302	205	1132135
30	0.0	0.0	0.0	chr14	23010872	23010899	(84032819)	+	(CCCCCA)n	Simple_repeat	1	28	(0)	1132136
1512	15.3	0.0	1.2	chr14	23010900	23011055	(84032663)	C	AluSx3	SINE/Alu	(107)	204	51	1132135
1709	11.1	0.4	0.0	chr14	23011077	23011319	(84032399)	C	AluSz	SINE/Alu	(66)	246	3	1132137
17	20.6	0.0	0.0	chr14	23070194	23070227	(83973491)	+	G-rich	Low_complexity	1	34	(0)	1132247
2440	6.0	3.2	0.7	chr14	23096236	23096534	(83947184)	+	AluSz	SINE/Alu	2	308	(4)	1132278
17	9.4	2.6	5.1	chr14	23113045	23113082	(83930636)	+	(GGT)n	Simple_repeat	1	39	(0)	1132311
20	3.4	3.3	0.0	chr14	23113250	23113279	(83930439)	+	(AAAT)n	Simple_repeat	1	31	(0)	1132312
260	31.6	9.0	5.6	chr14	23186657	23186817	(83856901)	C	MIRc	SINE/MIR	(10)	258	92	1132429
19	10.2	7.1	0.0	chr14	23306619	23306660	(83737058)	+	(AGCCC)n	Simple_repeat	1	45	(0)	1132674
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
16	5.2	0.0	0.0	chr14	24232390	24232409	(82811309)	+	(C)n	Simple_repeat	1	20	(0)	1133955
19	26.1	1.7	0.0	chr14	24430178	24430236	(82613482)	+	(GGCCC)n	Simple_repeat	1	60	(0)	1134255
21	0.0	3.1	3.0	chr14	28766883	28766914	(78276804)	+	(GCT)n	Simple_repeat	1	33	(0)	1139688
19	24.7	0.0	1.8	chr14	28766917	28766942	(78276776)	+	GA-rich	Low_complexity	1	53	(0)	1139689
18	12.0	0.0	0.0	chr14	28766943	28766969	(78276749)	+	(G)n	Simple_repeat	1	27	(0)	1139690
15	13.9	0.0	0.0	chr14	30984123	30984146	(76059572)	+	(C)n	Simple_repeat	1	24	(0)	1142642
12	28.5	4.9	3.5	chr14	30984221	30984302	(76059416)	+	A-rich	Low_complexity	1	86	(0)	1142643
27	13.0	0.0	0.0	chr14	30984267	30984308	(76059410)	+	(A)n	Simple_repeat	1	42	(0)	1142644
736	11.7	0.0	0.0	chr14	30984317	30984410	(76059308)	+	AluSg7	SINE/Alu	193	286	(23)	1142645
89	15.2	0.0	0.0	chr14	31059931	31060083	(75983635)	+	(ATAT)n	Simple_repeat	1	153	(0)	1142833
17	18.7	1.9	3.8	chr14	32076735	32076786	(74966932)	+	G-rich	Low_complexity	1	53	(0)	1144636
13	21.7	0.0	7.3	chr14	32076958	32077012	(74966706)	+	(CGCGC)n	Simple_repeat	1	55	(0)	1144637
13	7.9	7.4	0.0	chr14	32076988	32077014	(74966704)	+	(CGC)n	Simple_repeat	1	29	(0)	1144638
21	4.1	0.0	0.0	chr14	39395895	39395919	(67647799)	+	(G)n	Simple_repeat	1	25	(0)	1155672
373	25.8	15.6	5.2	chr14	39395929	39396214	(67647504)	+	Charlie17b	DNA/hAT-Charlie	357	677	(527)	1155673
2316	9.2	0.6	1.9	chr14	49693735	49694050	(57349668)	C	AluSp	SINE/Alu	(0)	313	2	1168428
17	11.2	0.0	0.0	chr14	54509419	54509447	(52534271)	+	(CCT)n	Simple_repeat	1	29	(0)	1176038
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
2120	7.8	1.6	9.3	chr14	58240713	58241045	(48802673)	+	AluSg4	SINE/Alu	3	309	(1)	1181897
2129	14.3	7.2	3.2	chr14	60094379	60094819	(46948899)	+	LTR46	LTR/ERV1	1	460	(0)	1184556
274	29.9	4.4	0.0	chr14	60094835	60094921	(46948797)	+	MIRb	SINE/MIR	58	148	(120)	1184557
13	21.9	2.3	2.2	chr14	61695857	61695900	(45347818)	+	(GCCC)n	Simple_repeat	1	45	(0)	1186913
12	12.4	10.9	2.0	chr14	63542635	63542680	(43501038)	+	(CGCTCC)n	Simple_repeat	1	51	(0)	1189432
13	9.1	0.0	3.9	chr14	63543158	63543183	(43500535)	+	(GGGA)n	Simple_repeat	1	26	(0)	1189433
21	0.0	0.0	0.0	chr14	64822352	64822374	(42221344)	+	(TC)n	Simple_repeat	1	23	(0)	1191942
33	0.0	0.0	0.0	chr14	64822375	64822402	(42221316)	+	(CA)n	Simple_repeat	1	28	(0)	1191943
13	14.2	3.2	0.0	chr14	65102374	65102404	(41941314)	+	GA-rich	Low_complexity	1	32	(0)	1192406
27	6.0	0.0	0.0	chr14	65102446	65102480	(41941238)	+	(CACT)n	Simple_repeat	1	35	(0)	1192407
17	0.0	4.2	0.0	chr14	65102481	65102495	(41941223)	+	(CA)n	Simple_repeat	1	16	(0)	1192408
17	31.6	0.0	1.5	chr14	65102710	65102725	(41940993)	+	(GGCGC)n	Simple_repeat	1	29	(37)	1192409
22	10.0	0.0	0.0	chr14	65102726	65102757	(41940961)	+	(G)n	Simple_repeat	1	32	(0)	1192410
17	31.6	0.0	1.5	chr14	65102758	65102775	(41940943)	+	(GGCGC)n	Simple_repeat	30	66	(0)	1192409
12	3.8	6.5	6.1	chr14	68793489	68793519	(38250199)	+	(GTT)n	Simple_repeat	1	33	(0)	1198273
14	12.0	0.0	9.1	chr14	68795281	68795324	(38248394)	+	(CCCCCAC)n	Simple_repeat	1	44	(0)	1198274
214	29.5	3.7	12.2	chr14	68796433	68796579	(38247139)	C	MER5A	DNA/hAT-Charlie	(7)	182	49	1198275
498	24.9	9.0	0.8	chr14	68796625	68796769	(38246949)	+	MIRb	SINE/MIR	37	187	(43)	1198276
21	17.3	0.0	2.1	chr14	68979848	68979895	(38063823)	+	(ACCCC)n	Simple_repeat	1	48	(0)	1198599
21	16.4	3.5	3.3	chr14	69152986	69153043	(37890675)	+	(CCG)n	Simple_repeat	1	60	(0)	1198957
229	22.2	9.1	8.2	chr14	69610978	69611075	(37432643)	+	MER5A	DNA/hAT-Charlie	44	142	(47)	1199887
182	27.7	6.7	6.7	chr14	69611092	69611180	(37432538)	C	L3	LINE/CR1	(3359)	740	652	1199888
14	18.8	0.0	5.0	chr14	69611256	69611295	(37432423)	+	(AAT)n	Simple_repeat	1	40	(0)	1199889
16	16.6	7.6	4.2	chr14	69611438	69611503	(37432215)	+	(CGG)n	Simple_repeat	1	71	(0)	1199890
20	20.9	6.1	0.0	chr14	69611512	69611581	(37432137)	+	(GCCCCT)n	Simple_repeat	1	74	(0)	1199891
12	15.3	3.5	0.0	chr14	69611654	69611682	(37432036)	+	(CCTC)n	Simple_repeat	1	30	(0)	1199892
14	19.5	0.0	2.7	chr14	71320464	71320500	(35723218)	+	(GTGA)n	Simple_repeat	1	37	(0)	1202619
14	22.0	3.6	3.5	chr14	71320800	71320855	(35722863)	+	G-rich	Low_complexity	1	58	(0)	1202620
16	24.8	0.0	3.6	chr14	71321008	71321016	(35722702)	+	(GCCGCTC)n	Simple_repeat	1	51	(0)	1202621
16	7.6	11.9	0.0	chr14	71321017	71321058	(35722660)	+	(CGCTCGG)n	Simple_repeat	1	47	(0)	1202622
16	12.2	5.6	0.0	chr14	73026790	73026825	(34016893)	+	(CCACCC)n	Simple_repeat	1	38	(0)	1205313
15	21.6	1.9	3.8	chr14	73026865	73026876	(34016842)	+	(GCCCG)n	Simple_repeat	1	51	(0)	1205314
17	8.8	5.3	2.5	chr14	73026877	73026914	(34016804)	+	(GCCCT)n	Simple_repeat	1	40	(0)	1205315
13	24.5	0.0	2.2	chr14	73058803	73058847	(33984871)	+	G-rich	Low_complexity	1	45	(0)	1205429
882	27.2	14.5	8.4	chr14	74301469	74301647	(32742071)	+	L1ME5	LINE/L1	5259	5418	(776)	1208197
1771	9.1	3.5	0.4	chr14	74301648	74301900	(32741818)	+	AluSq	SINE/Alu	24	284	(29)	1208198
28	0.0	0.0	0.0	chr14	74301901	74301927	(32741791)	+	(AAAG)n	Simple_repeat	1	27	(0)	1208199
882	27.2	14.5	8.4	chr14	74301928	74302614	(32741104)	+	L1ME5	LINE/L1	5419	6187	(7)	1208197
1653	16.2	22.4	0.0	chr14	74762080	74762237	(32281481)	+	LTR54	LTR/ERV1	336	509	(1)	1209135
549	22.5	8.6	0.7	chr14	74762238	74762285	(32281433)	+	L1ME3A	LINE/L1	6125	6172	(1)	1209134
1586	11.9	0.0	0.0	chr14	76913054	76913263	(30130455)	+	AluSx4	SINE/Alu	87	296	(14)	1213193
11	24.6	0.0	2.5	chr14	76913439	76913478	(30130240)	+	(CCCAGG)n	Simple_repeat	1	40	(0)	1213194
11	17.3	0.0	5.6	chr14	76957120	76957155	(30086563)	+	(CCCCCA)n	Simple_repeat	1	36	(0)	1213292
350	32.9	4.4	14.8	chr14	76957290	76957546	(30086172)	+	MIRb	SINE/MIR	27	255	(13)	1213293
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
17	4.9	0.0	0.0	chr14	79011430	79011450	(28032268)	+	(A)n	Simple_repeat	1	21	(0)	1217139
17	18.2	0.0	0.0	chr14	90397627	90397657	(16646061)	+	(C)n	Simple_repeat	1	31	(0)	1233837
19	16.9	0.0	0.0	chr14	90398108	90398140	(16645578)	+	G-rich	Low_complexity	1	33	(0)	1233838
533	23.5	2.5	0.0	chr14	90806065	90806183	(16237535)	C	L2a	LINE/L2	(5)	3421	3300	1234505
2351	8.5	0.0	0.0	chr14	93331599	93331880	(13711838)	+	AluSx1	SINE/Alu	1	282	(30)	1239312
16	20.1	0.0	5.9	chr14	95157310	95157360	(11886358)	+	(GCC)n	Simple_repeat	1	51	(0)	1242512
558	31.4	7.3	3.4	chr14	96917140	96917376	(10126342)	C	MIRb	SINE/MIR	(0)	268	22	1245724
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
195	15.0	2.4	0.0	chr14	99460947	99460986	(7582732)	C	MIR3	SINE/MIR	(82)	126	86	1250072
19	3.8	0.0	0.0	chr14	99605370	99605396	(7438322)	+	(GGCGG)n	Simple_repeat	1	27	(0)	1250260
758	27.8	15.5	0.4	chr14	99605510	99606066	(7437652)	C	L2a	LINE/L2	(3)	3423	2759	1250261
3242	22.2	2.0	0.5	chr14	99748689	99749443	(7294275)	C	L1MB8	LINE/L1	(44)	6134	5369	1250552
399	28.7	1.1	0.0	chr14	99749455	99749548	(7294170)	+	MIR	SINE/MIR	103	197	(65)	1250553
20	25.4	2.7	6.2	chr14	99971306	99971415	(7072303)	+	(CCGCCC)n	Simple_repeat	1	113	(0)	1250931
2655	5.5	0.3	0.0	chr14	100611397	100611706	(6432012)	+	AluY	SINE/Alu	1	311	(0)	1252136
2838	12.4	4.0	5.2	chr14	101229394	101229929	(5813789)	C	LTR1A2	LTR/ERV1	(3)	834	306	1252900
1390	11.4	11.2	1.8	chr14	101230187	101230462	(5813256)	C	LTR1A2	LTR/ERV1	(532)	305	1	1252900
405	13.9	6.5	1.4	chr14	101710859	101710930	(5332788)	+	MSTA	LTR/ERVL-MaLR	1	76	(289)	1253526
939	13.8	11.1	0.0	chr14	101710931	101711090	(5332628)	+	MLT-int	LTR/ERVL-MaLR	1	180	(1555)	1253527
42	15.3	4.7	2.7	chr14	101761566	101761672	(5282046)	+	G-rich	Low_complexity	1	112	(0)	1253612
36	2.7	0.0	0.0	chr14	101761678	101761715	(5282003)	+	(CGC)n	Simple_repeat	1	38	(0)	1253613
12	22.6	5.7	1.8	chr14	102087264	102087316	(4956402)	+	(CGCGCGC)n	Simple_repeat	1	56	(0)	1254194
12	18.4	5.4	0.0	chr14	102087355	102087391	(4956327)	+	(CCGCCCT)n	Simple_repeat	1	39	(0)	1254195
256	27.4	4.5	0.0	chr14	102087766	102087849	(4955869)	C	CR1_Mam	LINE/CR1	(52)	2152	2065	1254196
17	19.8	8.4	1.3	chr14	102776817	102776887	(4266831)	+	(TGCGTG)n	Simple_repeat	1	77	(0)	1255667
12	19.7	0.0	5.1	chr14	102777220	102777258	(4266460)	+	(CGCCC)n	Simple_repeat	1	39	(0)	1255668
25	19.6	1.7	0.0	chr14	103057747	103057810	(3985908)	+	(GGCGG)n	Simple_repeat	1	65	(0)	1256116
15	14.8	1.9	7.5	chr14	103123691	103123742	(3919976)	+	G-rich	Low_complexity	1	53	(0)	1256239
309	30.8	13.6	0.0	chr14	103124223	103124381	(3919337)	C	MIRb	SINE/MIR	(80)	188	5	1256240
53	26.3	6.0	4.0	chr14	103160627	103160957	(3882761)	+	(CAGCCTG)n	Simple_repeat	1	351	(0)	1256298
36	5.2	0.0	0.0	chr14	103271350	103271389	(3772329)	+	(AC)n	Simple_repeat	1	40	(0)	1256467
22	25.6	2.9	1.4	chr14	103271395	103271462	(3772256)	+	(CA)n	Simple_repeat	1	70	(0)	1256468
2370	9.3	0.3	0.0	chr14	103271480	103271779	(3771939)	C	AluSp	SINE/Alu	(12)	301	1	1256469
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
784	11.9	1.5	3.7	chr14	103528850	103528983	(3514735)	C	AluJo	SINE/Alu	(181)	131	1	1256995
15	22.5	1.8	3.6	chr14	103529138	103529192	(3514526)	+	(GGCGGA)n	Simple_repeat	1	56	(0)	1256996
15	34.6	0.0	1.4	chr14	103629120	103629193	(3414525)	+	G-rich	Low_complexity	1	74	(0)	1257196
17	6.8	3.0	2.9	chr14	104689588	104689620	(2354098)	+	(CCGC)n	Simple_repeat	1	34	(0)	1258722
11	13.2	5.7	2.7	chr14	104689643	104689677	(2354041)	+	(CGGCAGC)n	Simple_repeat	1	37	(0)	1258723
13	17.4	5.3	5.0	chr14	104800722	104800729	(2242989)	+	(CCGGCCCG)n	Simple_repeat	1	25	(35)	1258824
17	11.0	4.9	2.3	chr14	104800730	104800770	(2242948)	+	(GCCC)n	Simple_repeat	1	43	(0)	1258825
13	17.4	5.3	5.0	chr14	104800771	104800778	(2242940)	+	(CCGGCCCG)n	Simple_repeat	26	60	(0)	1258824
23	23.4	3.6	6.0	chr14	104800794	104800905	(2242813)	+	(CGG)n	Simple_repeat	1	116	(0)	1258826
15	20.6	0.0	2.4	chr14	105021988	105022028	(2021690)	+	(GGCAGG)n	Simple_repeat	1	41	(0)	1259102
244	26.6	6.8	3.1	chr14	105022089	105022216	(2021502)	C	L2	LINE/L2	(525)	2894	2762	1259103
322	25.6	2.5	0.0	chr14	105086596	105086673	(1957045)	C	MIR	SINE/MIR	(118)	144	65	1259226
54	23.8	4.1	2.9	chr14	105168515	105168711	(1875007)	+	(GCG)n	Simple_repeat	1	205	(0)	1259349
25	22.4	3.2	4.1	chr15	22786514	22786608	(79204581)	+	(CCCCCG)n	Simple_repeat	1	98	(0)	1266288
21	10.4	0.0	6.4	chr15	22786608	22786654	(79204535)	+	G-rich	Low_complexity	1	47	(0)	1266289
29	3.2	0.0	0.0	chr15	22786672	22786703	(79204486)	+	(GCG)n	Simple_repeat	1	32	(0)	1266290
26	20.3	7.8	0.0	chr15	22786839	22786928	(79204261)	+	(GGCAGGC)n	Simple_repeat	1	97	(0)	1266291
13	20.1	0.0	2.8	chr15	22980184	22980219	(79010970)	+	(GGCCC)n	Simple_repeat	1	36	(0)	1266653
41	2.6	0.0	0.0	chr15	25439846	25439885	(76551304)	+	(GT)n	Simple_repeat	1	40	(0)	1269999
14	5.0	0.0	0.0	chr15	25850629	25850649	(76140540)	+	(CTCC)n	Simple_repeat	1	21	(0)	1270596
17	18.2	0.0	0.0	chr15	28295309	28295339	(73695850)	+	G-rich	Low_complexity	1	31	(0)	1273630
619	28.4	1.8	12.9	chr15	28295340	28295445	(73695744)	+	Cheshire	DNA/hAT-Charlie	3	74	(2346)	1273631
1499	15.1	0.0	4.8	chr15	29657056	29657326	(72333863)	C	AluYj4	SINE/Alu	(20)	291	34	1275821
2822	11.8	5.2	13.7	chr15	29657327	29657807	(72333382)	C	LTR12F	LTR/ERV1	(88)	431	1	1275820
3665	14.8	4.4	7.5	chr15	29673425	29673894	(72317295)	C	LTR8	LTR/ERV1	(232)	459	6	1275850
2427	8.5	0.0	0.0	chr15	29674260	29674566	(72316623)	C	AluSg	SINE/Alu	(2)	308	2	1275852
26	16.3	4.2	2.7	chr15	32030399	32030472	(69960717)	+	G-rich	Low_complexity	1	75	(0)	1279332
2254	11.5	4.5	3.5	chr15	34588273	34588649	(67402540)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1283072
279	35.8	4.2	0.7	chr15	34588722	34588859	(67402330)	C	MIR	SINE/MIR	(88)	174	32	1283073
26	18.9	0.0	0.0	chr15	35019363	35019410	(66971779)	+	(C)n	Simple_repeat	1	48	(0)	1283798
93	7.7	0.7	2.1	chr15	35019481	35019623	(66971566)	+	(TCC)n	Simple_repeat	1	144	(0)	1283799
928	27.9	16.9	1.3	chr15	35546809	35547535	(66443654)	C	L2a	LINE/L2	(5)	3421	2555	1284509
6586	18.9	5.4	2.4	chr15	36066813	36068182	(65923007)	C	MER52A	LTR/ERV1	(0)	1755	374	1285197
12	21.5	2.1	4.2	chr15	37098212	37098258	(64892931)	+	G-rich	Low_complexity	1	48	(0)	1286502
54	0.0	0.0	0.0	chr15	37098380	37098425	(64892764)	+	(GA)n	Simple_repeat	1	46	(0)	1286503
22	19.0	0.0	0.0	chr15	37100568	37100609	(64890580)	+	G-rich	Low_complexity	1	42	(0)	1286511
33	14.5	0.0	0.0	chr15	37100691	37100744	(64890445)	+	(GT)n	Simple_repeat	1	54	(0)	1286512
18	17.3	0.0	2.8	chr15	37100727	37100762	(64890427)	+	(GC)n	Simple_repeat	1	36	(0)	1286513
23	17.4	4.9	1.9	chr15	37100766	37100818	(64890371)	+	GA-rich	Low_complexity	1	54	(0)	1286514
12	8.9	4.2	0.0	chr15	37102047	37102070	(64889119)	+	(GGAG)n	Simple_repeat	1	25	(0)	1286517
15	0.0	5.3	0.0	chr15	37102095	37102113	(64889076)	+	(TG)n	Simple_repeat	1	20	(0)	1286518
24	3.5	0.0	0.0	chr15	37102113	37102141	(64889048)	+	(GA)n	Simple_repeat	1	29	(0)	1286519
54	0.0	0.0	0.0	chr15	38251698	38251743	(63739446)	+	(AC)n	Simple_repeat	1	46	(0)	1288012
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
12	20.8	0.0	2.9	chr15	38252257	38252291	(63738898)	+	(GGC)n	Simple_repeat	1	35	(0)	1288014
14	19.8	2.4	2.3	chr15	38253072	38253113	(63738076)	+	(GCC)n	Simple_repeat	1	43	(0)	1288015
13	30.9	0.0	3.4	chr15	38253095	38253153	(63738036)	+	(GCT)n	Simple_repeat	1	59	(0)	1288016
15	20.6	0.0	6.0	chr15	38564665	38564714	(63426475)	+	(CGC)n	Simple_repeat	1	50	(0)	1288523
170	19.5	7.2	1.1	chr15	40050510	40051022	(61940167)	+	(TG)n	Simple_repeat	1	550	(0)	1290591
179	16.5	6.6	3.3	chr15	40051023	40051049	(61940140)	+	(GTGGTGT)n	Simple_repeat	3	578	(0)	1290592
47	16.5	3.5	5.4	chr15	40440994	40441136	(61550053)	+	(GCCC)n	Simple_repeat	1	148	(0)	1291194
18	17.2	4.7	4.5	chr15	40441291	40441354	(61549835)	+	GA-rich	Low_complexity	1	67	(0)	1291195
729	1.2	0.0	0.0	chr15	40593825	40593906	(61397283)	C	tRNA-Ser-AGY	tRNA	(3)	82	1	1291509
15	8.7	0.0	0.0	chr15	40754816	40754840	(61236349)	+	(GCGG)n	Simple_repeat	1	25	(0)	1291861
12	26.2	0.0	2.3	chr15	40907149	40907191	(61083998)	+	G-rich	Low_complexity	1	43	(0)	1292186
23	18.4	2.0	0.0	chr15	41116161	41116210	(60874979)	+	(GGC)n	Simple_repeat	1	51	(0)	1292535
2484	6.6	0.3	0.0	chr15	41544448	41544749	(60446440)	C	AluSx1	SINE/Alu	(9)	303	1	1293600
15	25.8	0.0	7.8	chr15	41544860	41544923	(60446266)	+	(CA)n	Simple_repeat	1	64	(0)	1293601
1227	22.0	4.6	4.7	chr15	42065614	42066205	(59924984)	C	MER77	LTR/ERVL	(174)	764	4	1294504
1439	28.4	4.6	1.8	chr15	42066314	42066432	(59924757)	C	MER90a	LTR/ERV1	(0)	614	495	1294505
38	0.0	0.0	0.0	chr15	42066433	42066465	(59924724)	+	(GT)n	Simple_repeat	1	33	(0)	1294506
1439	28.4	4.6	1.8	chr15	42066466	42066851	(59924338)	C	MER90a	LTR/ERV1	(120)	494	94	1294505
2304	11.4	0.0	0.0	chr15	43509411	43509708	(58481481)	C	AluSx1	SINE/Alu	(14)	298	1	1297145
25	23.9	0.0	0.0	chr15	43509832	43509886	(58481303)	+	A-rich	Low_complexity	1	55	(0)	1297146
458	35.1	1.5	2.3	chr15	43510183	43510408	(58480781)	C	L3b	LINE/CR1	(136)	5096	4917	1297147
18	4.7	0.0	0.0	chr15	43510503	43510524	(58480665)	+	(A)n	Simple_repeat	1	22	(0)	1297148
15	25.1	3.5	1.7	chr15	43510525	43510558	(58480631)	+	(ACAA)n	Simple_repeat	3	60	(0)	1297149
19	21.1	0.0	0.0	chr15	43517580	43517617	(58473572)	+	(C)n	Simple_repeat	1	38	(0)	1297153
11	28.4	0.0	0.0	chr15	43518552	43518590	(58472599)	+	(GCTGGA)n	Simple_repeat	1	39	(0)	1297154
19	4.0	0.0	0.0	chr15	44537197	44537222	(57453967)	+	(GGC)n	Simple_repeat	1	26	(0)	1299120
258	23.3	0.0	1.6	chr15	44710086	44710146	(57281043)	C	MIRb	SINE/MIR	(22)	246	187	1299423
726	27.1	13.4	3.6	chr15	51671971	51672299	(50318890)	C	L2a	LINE/L2	(137)	3289	2924	1309877
1838	16.5	0.0	4.3	chr15	52139160	52139481	(49851708)	+	AluJo	SINE/Alu	1	308	(4)	1310798
609	24.2	6.5	6.8	chr15	52139482	52139713	(49851476)	C	MIR	SINE/MIR	(16)	246	16	1310797
2301	6.2	0.0	4.9	chr15	55406939	55407242	(46583947)	+	AluSq4	SINE/Alu	7	295	(16)	1315478
32	2.1	3.6	5.3	chr15	56243786	56243840	(45747349)	+	(CGC)n	Simple_repeat	1	57	(0)	1316885
669	30.6	7.2	0.0	chr15	56245597	56245815	(45745374)	C	MIR	SINE/MIR	(0)	262	27	1316888
1727	18.8	0.0	0.7	chr15	56293053	56293334	(45697855)	+	AluJo	SINE/Alu	1	280	(32)	1316955
24	18.1	0.0	0.0	chr15	56293371	56293414	(45697775)	+	A-rich	Low_complexity	1	44	(0)	1316956
1781	20.8	13.8	4.6	chr15	56293445	56294075	(45697114)	+	MER77B	LTR/ERVL	3	700	(0)	1316957
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
33	24.8	3.5	2.5	chr15	57323971	57324084	(44667105)	+	GA-rich	Low_complexity	1	118	(0)	1318503
2263	11.8	0.0	3.4	chr15	58471125	58471446	(43519743)	C	AluSz	SINE/Alu	(0)	312	2	1320227
255	30.8	23.0	2.2	chr15	58521286	58521604	(43469585)	C	L2c	LINE/L2	(46)	3341	2937	1320327
15	27.3	0.0	0.0	chr15	58521845	58521888	(43469301)	+	(GAT)n	Simple_repeat	1	44	(0)	1320328
29	0.0	0.0	0.0	chr15	58521906	58521930	(43469259)	+	(TC)n	Simple_repeat	1	25	(0)	1320329
644	16.7	4.2	4.2	chr15	58862866	58863009	(43128180)	+	L1MB8	LINE/L1	6023	6166	(12)	1320974
40	2.6	0.0	0.0	chr15	58863020	58863058	(43128131)	+	(TG)n	Simple_repeat	1	39	(0)	1320977
1967	11.2	0.3	4.1	chr15	58863059	58863352	(43127837)	C	AluSx	SINE/Alu	(21)	291	9	1320978
1585	16.6	9.2	0.0	chr15	58863379	58863655	(43127534)	C	AluJb	SINE/Alu	(7)	305	1	1320979
2068	25.3	3.2	4.5	chr15	58863687	58863878	(43127311)	+	L1M4	LINE/L1	3744	3931	(2215)	1320980
1069	18.4	0.5	0.5	chr15	61119194	61119378	(40871811)	C	AluJr	SINE/Alu	(7)	305	121	1324826
46	18.9	0.0	1.1	chr15	61119384	61119472	(40871717)	+	(TA)n	Simple_repeat	1	89	(0)	1324827
213	33.6	18.3	3.0	chr15	63345072	63345301	(38645888)	+	L3	LINE/CR1	3407	3679	(420)	1328369
17	16.3	6.2	0.0	chr15	63504421	63504468	(38486721)	+	G-rich	Low_complexity	1	51	(0)	1328722
1779	18.7	0.0	1.3	chr15	64246340	64246639	(37744550)	+	AluJr	SINE/Alu	1	296	(16)	1330006
2174	14.2	0.0	0.3	chr15	64380102	64380411	(37610778)	+	AluSx3	SINE/Alu	2	310	(1)	1330256
1659	17.8	5.9	0.3	chr15	64380439	64380725	(37610464)	+	AluJb	SINE/Alu	1	304	(8)	1330257
1081	15.5	0.0	0.0	chr15	64809750	64809910	(37181279)	+	AluJo	SINE/Alu	137	297	(15)	1331257
254	21.9	24.4	2.0	chr15	64810279	64810376	(37180813)	+	MIRb	SINE/MIR	54	180	(28)	1331258
12	27.2	0.0	3.9	chr15	65185348	65185353	(36805836)	+	(CCCCAC)n	Simple_repeat	1	48	(0)	1332077
13	24.6	0.0	2.4	chr15	65185354	65185395	(36805794)	+	(CCCCCT)n	Simple_repeat	1	42	(0)	1332078
959	16.1	7.9	0.0	chr15	65212343	65212516	(36778673)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1332127
1152	12.4	0.0	4.5	chr15	65239956	65240133	(36751056)	C	AluJb	SINE/Alu	(10)	302	133	1332199
1576	10.9	4.9	15.8	chr15	65240135	65240323	(36750866)	C	AluSz	SINE/Alu	(3)	309	169	1332200
47	0.0	0.0	0.0	chr15	65240324	65240363	(36750826)	+	(GT)n	Simple_repeat	1	40	(0)	1332201
1576	10.9	4.9	15.8	chr15	65240364	65240522	(36750667)	C	AluSz	SINE/Alu	(144)	168	1	1332200
2224	19.8	6.7	2.5	chr15	65240532	65240831	(36750358)	C	L1ME1	LINE/L1	(296)	5883	5577	1332197
57	9.9	6.2	1.7	chr15	65294934	65295045	(36696144)	+	(TA)n	Simple_repeat	1	119	(0)	1332319
1122	15.1	0.5	0.5	chr15	65295080	65295271	(36695918)	+	AluJr	SINE/Alu	9	200	(112)	1332320
17	4.9	0.0	0.0	chr15	65295294	65295314	(36695875)	+	(G)n	Simple_repeat	1	21	(0)	1332321
317	30.0	10.9	2.7	chr15	65295324	65295508	(36695681)	+	L1ME3E	LINE/L1	6002	6203	(39)	1332322
1195	10.1	1.2	0.0	chr15	65295576	65295743	(36695446)	+	AluSg4	SINE/Alu	130	299	(11)	1332323
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
332	24.8	8.0	8.0	chr15	65792875	65793036	(36198153)	+	MIR	SINE/MIR	101	262	(0)	1333346
266	27.4	13.6	2.7	chr15	65793171	65793320	(36197869)	C	L2a	LINE/L2	(0)	3387	3219	1333347
2054	14.8	0.3	1.0	chr15	65793337	65793634	(36197555)	+	AluJb	SINE/Alu	1	296	(16)	1333348
14	10.5	4.7	10.4	chr15	66655084	66655147	(35336042)	+	(CTCCCGG)n	Simple_repeat	1	67	(0)	1335177
21	0.0	0.0	0.0	chr15	66655355	66655377	(35335812)	+	(T)n	Simple_repeat	1	23	(0)	1335178
17	20.9	0.0	5.5	chr15	66702311	66702366	(35288823)	+	(GAGC)n	Simple_repeat	1	52	(0)	1335298
366	30.5	15.3	3.7	chr15	67063858	67064075	(34927114)	+	MIRb	SINE/MIR	7	254	(14)	1336012
12	8.1	3.6	3.5	chr15	67064627	67064654	(34926535)	+	(TTGTT)n	Simple_repeat	1	29	(0)	1336013
2177	7.3	0.3	9.4	chr15	67541547	67541874	(34449315)	+	AluSg	SINE/Alu	1	298	(12)	1336779
231	15.6	4.2	0.0	chr15	67799635	67799679	(34191510)	C	LTR79	LTR/ERVL	(219)	308	262	1337152
432	28.7	17.7	1.7	chr15	67800232	67800662	(34190527)	C	Charlie15b	DNA/hAT-Charlie	(2)	1059	555	1337153
15	0.0	0.0	0.0	chr15	68306310	68306326	(33684863)	+	(TC)n	Simple_repeat	1	17	(0)	1338104
208	31.9	1.4	0.0	chr15	68348056	68348124	(33643065)	C	MIRc	SINE/MIR	(27)	241	172	1338173
20	3.1	6.1	0.0	chr15	68818036	68818068	(33173121)	+	(AAAT)n	Simple_repeat	1	35	(0)	1339115
19	19.5	3.1	8.1	chr15	68818107	68818202	(33172987)	+	(CCGCGCC)n	Simple_repeat	1	99	(0)	1339116
18	0.0	0.0	0.0	chr15	68820633	68820652	(33170537)	+	(CA)n	Simple_repeat	1	20	(0)	1339122
391	27.6	1.4	6.1	chr15	69667056	69667215	(32323974)	C	MIR1_Amn	SINE/MIR	(54)	154	6	1340677
15	27.3	0.0	0.0	chr15	69667420	69667463	(32323726)	+	(CCC)n	Simple_repeat	1	44	(0)	1340678
363	24.1	9.2	0.0	chr15	69667550	69667657	(32323532)	+	MIR3	SINE/MIR	6	124	(84)	1340679
256	31.2	11.1	6.3	chr15	70086672	70086876	(31904313)	+	Charlie30a	DNA/hAT-Charlie	175	390	(401)	1341448
270	31.3	2.0	1.0	chr15	70087136	70087235	(31903954)	C	L2b	LINE/L2	(23)	3352	3252	1341449
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
35	27.5	0.0	0.0	chr15	70100033	70100129	(31891060)	+	A-rich	Low_complexity	1	97	(0)	1341466
12	20.6	5.1	0.0	chr15	70101345	70101383	(31889806)	+	(CCCCA)n	Simple_repeat	1	41	(0)	1341468
20	0.0	0.0	0.0	chr15	70101681	70101702	(31889487)	+	(A)n	Simple_repeat	1	22	(0)	1341469
47	0.0	0.0	0.0	chr15	70434733	70434772	(31556417)	+	(CA)n	Simple_repeat	1	40	(0)	1342139
2205	9.1	0.0	1.1	chr15	72226246	72226532	(29764657)	+	AluY	SINE/Alu	1	284	(27)	1345101
30	0.0	0.0	0.0	chr15	72226533	72226561	(29764628)	+	(AAAAT)n	Simple_repeat	1	29	(0)	1345102
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
16	9.1	2.6	5.0	chr15	72320149	72320187	(29671002)	+	(CCCGAGC)n	Simple_repeat	1	40	(0)	1345248
38	6.4	0.0	0.0	chr15	72320477	72320525	(29670664)	+	(GCACACACAG)n	Simple_repeat	1	49	(0)	1345249
22	23.7	5.8	0.0	chr15	73052219	73052287	(28938902)	+	(GC)n	Simple_repeat	1	73	(0)	1346524
28	0.0	0.0	3.2	chr15	73052293	73052323	(28938866)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	1346525
16	13.2	0.0	0.0	chr15	73052406	73052430	(28938759)	+	(C)n	Simple_repeat	1	25	(0)	1346526
12	16.5	5.9	0.0	chr15	73052443	73052476	(28938713)	+	(CTCCC)n	Simple_repeat	1	36	(0)	1346527
19	17.9	1.9	3.6	chr15	73052520	73052573	(28938616)	+	G-rich	Low_complexity	1	55	(0)	1346528
13	10.5	6.5	0.0	chr15	73052629	73052659	(28938530)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	1346529
11	29.6	1.6	3.2	chr15	73685173	73685233	(28305956)	+	G-rich	Low_complexity	1	62	(0)	1347541
49	0.0	0.0	0.0	chr15	73685454	73685495	(28305694)	+	(TG)n	Simple_repeat	1	42	(0)	1347542
317	26.8	9.1	3.1	chr15	73685524	73685719	(28305470)	+	MamRep434	DNA/TcMar-Tigger	185	393	(33)	1347543
22	10.4	0.0	0.0	chr15	74048579	74048609	(27942580)	+	(C)n	Simple_repeat	1	31	(0)	1348166
12	13.7	0.0	0.0	chr15	74048636	74048659	(27942530)	+	(GGT)n	Simple_repeat	1	24	(0)	1348167
318	26.2	2.3	5.1	chr15	74048676	74048812	(27942377)	+	MER113B	DNA/hAT-Charlie	1	133	(169)	1348168
28	14.0	5.8	4.4	chr15	74054087	74054172	(27937017)	+	G-rich	Low_complexity	1	91	(0)	1348180
640	19.1	2.2	0.0	chr15	74054389	74054519	(27936670)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	1348181
282	34.2	15.6	1.2	chr15	74389383	74389628	(27601561)	C	L2a	LINE/L2	(85)	3341	3054	1348752
266	28.1	12.3	4.5	chr15	74390063	74390177	(27601012)	+	MIR	SINE/MIR	111	238	(24)	1348753
2258	11.9	0.0	0.6	chr15	74390178	74390488	(27600701)	+	AluSz	SINE/Alu	2	310	(2)	1348754
428	29.8	1.7	0.0	chr15	74434508	74434621	(27556568)	+	Tigger19a	DNA/TcMar-Tigger	78	193	(130)	1348812
1268	24.3	11.3	5.9	chr15	74490026	74490757	(27500432)	+	L2a	LINE/L2	2645	3426	(0)	1348922
325	32.3	13.2	1.5	chr15	74816898	74817098	(27174091)	C	MIRb	SINE/MIR	(37)	231	4	1349581
741	29.3	8.3	2.1	chr15	74817225	74817461	(27173728)	C	MIRb	SINE/MIR	(14)	254	2	1349582
20	7.9	0.0	0.0	chr15	74873424	74873450	(27117739)	+	(C)n	Simple_repeat	1	27	(0)	1349665
181	27.9	4.6	8.0	chr15	74951275	74951387	(27039802)	+	L2c	LINE/L2	3058	3166	(221)	1349858
1583	8.9	8.1	2.4	chr15	74951416	74951661	(27039528)	C	AluSq2	SINE/Alu	(52)	261	1	1349859
3945	13.8	9.0	4.3	chr15	75065784	75066524	(26924665)	C	LTR19C	LTR/ERV1	(0)	779	1	1350108
11684	7.0	0.9	1.4	chr15	75066525	75067944	(26923245)	+	HERVP71A-int	LTR/ERV1	4558	5971	(1619)	1350106
23	20.4	3.1	1.5	chr15	75451584	75451647	(26539542)	+	G-rich	Low_complexity	1	66	(0)	1350822
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
1670	15.3	0.0	1.5	chr15	75758854	75759114	(26232075)	+	AluJb	SINE/Alu	42	298	(14)	1351474
237	20.4	2.0	0.0	chr15	75842327	75842375	(26148814)	C	L2b	LINE/L2	(18)	3357	3308	1351617
309	23.0	6.3	1.3	chr15	75842393	75842467	(26148722)	C	L2a	LINE/L2	(3)	3423	3345	1351618
216	30.3	1.3	0.0	chr15	75842893	75842968	(26148221)	C	L2a	LINE/L2	(676)	2743	2667	1351618
18	10.0	6.2	0.0	chr15	76336953	76336984	(25654205)	+	(TG)n	Simple_repeat	1	34	(0)	1352421
362	25.8	3.4	5.9	chr15	77659479	77659637	(24331552)	C	MIRb	SINE/MIR	(34)	174	15	1354419
19	15.0	0.0	0.0	chr15	77659830	77659866	(24331323)	+	(GGTGG)n	Simple_repeat	1	37	(0)	1354420
345	29.4	0.0	9.9	chr15	77660082	77660202	(24330987)	+	MIRc	SINE/MIR	94	202	(60)	1354421
12	14.6	0.0	5.9	chr15	77910063	77910096	(24081093)	+	(TATATA)n	Simple_repeat	1	34	(0)	1354870
64	22.5	0.0	0.0	chr15	77992762	77992895	(23998294)	+	(C)n	Simple_repeat	1	134	(0)	1355005
19	20.0	0.9	11.1	chr15	78872783	78872889	(23118300)	+	G-rich	Low_complexity	1	108	(0)	1356790
7190	7.6	4.1	0.1	chr15	78902313	78903239	(23087950)	C	LTR13A	LTR/ERVK	(0)	966	1	1356838
1268	11.5	0.0	0.0	chr15	80866636	80866800	(21124389)	+	AluSq	SINE/Alu	133	297	(16)	1360252
256	24.1	0.8	8.1	chr15	80866999	80867116	(21124073)	+	MIR3	SINE/MIR	61	160	(48)	1360253
613	18.4	2.3	0.0	chr15	80867117	80867241	(21123948)	+	MER5A1	DNA/hAT-Charlie	1	128	(38)	1360254
22	17.7	1.9	1.9	chr15	82046055	82046107	(19945082)	+	(CCCT)n	Simple_repeat	1	54	(0)	1362235
19	23.5	1.4	4.2	chr15	82046309	82046378	(19944811)	+	(CCGCCCC)n	Simple_repeat	1	71	(0)	1362236
413	22.8	25.6	0.0	chr15	82540917	82541131	(19450058)	+	L2a	LINE/L2	3105	3393	(33)	1363031
2171	8.6	0.3	4.6	chr15	83068886	83069067	(18922122)	C	AluY	SINE/Alu	(21)	290	121	1363981
2310	16.1	4.0	13.2	chr15	83069068	83069641	(18921548)	C	LTR12F	LTR/ERV1	(0)	519	1	1363982
2199	11.2	0.3	0.7	chr15	84734371	84734666	(17256523)	C	AluSx1	SINE/Alu	(17)	295	1	1366542
1946	15.2	2.3	0.0	chr15	84734672	84734966	(17256223)	C	AluJb	SINE/Alu	(10)	302	1	1366543
16	17.4	4.3	2.0	chr15	84748212	84748258	(17242931)	+	G-rich	Low_complexity	1	49	(0)	1366585
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
22	15.0	0.0	6.8	chr15	85795061	85795119	(16196070)	+	G-rich	Low_complexity	1	59	(0)	1368355
415	37.0	2.3	3.1	chr15	88244264	88244486	(13746703)	C	MIRb	SINE/MIR	(46)	222	2	1372045
20	28.8	4.4	2.5	chr15	88639010	88639123	(13352066)	+	(GCAGCG)n	Simple_repeat	1	119	(0)	1372728
332	31.1	12.3	3.0	chr15	88987684	88987882	(13003307)	+	MIRc	SINE/MIR	1	220	(48)	1373396
311	26.9	8.2	5.6	chr15	89332532	89332744	(12658445)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1374033
292	35.1	9.9	3.1	chr15	89332820	89333036	(12658153)	+	L2a	LINE/L2	3176	3417	(9)	1374034
27	3.3	0.0	0.0	chr15	89400142	89400172	(12591017)	+	(CCCCG)n	Simple_repeat	1	31	(0)	1374142
12	20.3	0.0	6.7	chr15	90000781	90000825	(11990364)	+	(ACCCGC)n	Simple_repeat	1	45	(0)	1375384
20	15.7	3.5	2.3	chr15	90000979	90001031	(11990158)	+	GA-rich	Low_complexity	1	53	(0)	1375385
19	20.4	5.2	0.0	chr15	90001083	90001140	(11990049)	+	GA-rich	Low_complexity	1	61	(0)	1375385
14	4.0	7.7	0.0	chr15	90001180	90001205	(11989984)	+	(GAAA)n	Simple_repeat	1	28	(0)	1375386
34	25.9	3.0	2.9	chr15	90001826	90001957	(11989232)	+	GA-rich	Low_complexity	1	136	(0)	1375392
36	0.0	0.0	0.0	chr15	90001967	90001997	(11989192)	+	(GA)n	Simple_repeat	1	31	(0)	1375393
23	21.8	0.0	0.0	chr15	90002020	90002072	(11989117)	+	(GCG)n	Simple_repeat	1	53	(0)	1375394
33	20.1	5.2	2.0	chr15	90062142	90062237	(11928952)	+	(TC)n	Simple_repeat	1	101	(0)	1375522
27	24.7	4.9	3.1	chr15	90062238	90062263	(11928926)	+	(TCCCTC)n	Simple_repeat	1	128	(0)	1375523
721	22.0	2.1	5.2	chr15	90142931	90143122	(11848067)	C	L1MA9	LINE/L1	(0)	6312	6127	1375716
620	25.0	9.2	3.7	chr15	90184398	90184613	(11806576)	C	MIRb	SINE/MIR	(0)	268	40	1375845
12	14.3	3.0	2.9	chr15	90184785	90184817	(11806372)	+	G-rich	Low_complexity	1	34	(0)	1375846
13	11.3	7.5	2.3	chr15	90184818	90184823	(11806366)	+	(TGGCCGG)n	Simple_repeat	2	43	(0)	1375847
20	14.5	0.0	0.0	chr15	90184875	90184912	(11806277)	+	(GGGCG)n	Simple_repeat	1	38	(0)	1375848
225	24.9	5.5	1.1	chr15	90185603	90185707	(11805482)	+	MIR1_Amn	SINE/MIR	87	194	(74)	1375849
455	23.9	5.5	3.5	chr15	90185762	90185904	(11805285)	C	MIR3	SINE/MIR	(17)	191	46	1375850
2309	6.7	3.0	0.7	chr15	90188672	90188968	(11802221)	C	AluYk3	SINE/Alu	(7)	304	1	1375858
224	34.0	4.8	2.0	chr15	90189010	90189111	(11802078)	+	L2c	LINE/L2	3282	3386	(1)	1375859
48	14.6	2.3	6.7	chr15	90189113	90189244	(11801945)	+	GA-rich	Low_complexity	1	135	(0)	1375860
675	29.6	4.3	0.9	chr15	90189334	90189558	(11801631)	+	MIRb	SINE/MIR	32	264	(4)	1375861
23	10.0	0.0	0.0	chr15	90286544	90286576	(11704613)	+	(A)n	Simple_repeat	1	33	(0)	1376046
15	19.4	2.3	2.3	chr15	90286906	90286948	(11704241)	+	(ATTT)n	Simple_repeat	1	44	(0)	1376047
2203	10.6	2.6	0.0	chr15	90647831	90648133	(11343056)	+	AluSx	SINE/Alu	1	311	(1)	1376775
2000	12.8	4.3	0.0	chr15	90665815	90666103	(11325086)	C	AluJo	SINE/Alu	(9)	303	2	1376818
2228	4.2	4.7	1.4	chr15	90901351	90901639	(11089550)	+	L1PA8	LINE/L1	5866	6164	(8)	1377330
456	31.5	5.6	4.5	chr15	90901701	90901818	(11089371)	+	L1ME4c	LINE/L1	282	409	(421)	1377331
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
37	29.6	1.2	4.1	chr15	91853567	91853734	(10137455)	+	(GGC)n	Simple_repeat	1	170	(0)	1378973
15	13.8	0.0	12.9	chr15	94845036	94845099	(7146090)	+	(GCC)n	Simple_repeat	1	55	(0)	1383603
25	14.7	2.2	0.0	chr15	96123650	96123694	(5867495)	+	(GT)n	Simple_repeat	1	46	(0)	1385405
20	0.0	3.7	0.0	chr15	96330401	96330427	(5660762)	+	(CGG)n	Simple_repeat	1	28	(0)	1385724
14	21.2	0.0	7.1	chr15	96330426	96330482	(5660707)	+	(GCCCCCC)n	Simple_repeat	1	52	(0)	1385725
17	26.3	2.2	5.4	chr15	98648104	98648193	(3342996)	+	(CCCCG)n	Simple_repeat	1	92	(0)	1389003
14	26.7	0.0	3.5	chr16	54067	54123	(90284222)	+	G-rich	Low_complexity	1	57	(0)	1394122
290	21.1	0.0	5.0	chr16	54213	54292	(90284053)	+	MER96B	DNA/hAT-Tip100	31	106	(311)	1394123
12	21.6	0.0	0.0	chr16	78382	78413	(90259932)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1394142
45	12.9	0.0	4.3	chr16	397653	397744	(89940601)	+	G-rich	Low_complexity	1	92	(0)	1394691
25	16.4	5.0	6.6	chr16	660937	660978	(89677367)	+	(GCCCC)n	Simple_repeat	1	67	(39)	1395055
20	18.3	0.0	0.0	chr16	660979	661015	(89677330)	+	(C)n	Simple_repeat	1	37	(0)	1395056
25	16.4	5.0	6.6	chr16	661016	661037	(89677308)	+	(GCCCC)n	Simple_repeat	68	106	(0)	1395055
200	20.8	13.2	0.0	chr16	675308	675379	(89662966)	C	L2b	LINE/L2	(166)	3209	3127	1395068
237	6.1	0.0	0.0	chr16	675348	675380	(89662965)	C	L2c	LINE/L2	(226)	3161	3129	1395069
13	13.0	0.0	7.7	chr16	715001	715039	(89623306)	+	(CGCCC)n	Simple_repeat	1	39	(0)	1395112
23	17.6	4.4	2.8	chr16	788378	788402	(89549943)	+	(CCGCC)n	Simple_repeat	1	69	(0)	1395210
19	23.2	0.0	0.0	chr16	788403	788443	(89549902)	+	(C)n	Simple_repeat	1	41	(0)	1395211
18	23.1	2.0	0.0	chr16	991559	991609	(89346736)	+	GA-rich	Low_complexity	1	52	(0)	1395385
20	11.3	0.0	0.0	chr16	991705	991733	(89346612)	+	(C)n	Simple_repeat	1	29	(0)	1395386
16	18.9	0.0	0.0	chr16	1103027	1103062	(89235283)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1395499
13	13.6	0.0	7.9	chr16	1152609	1152646	(89185699)	+	(CCCGC)n	Simple_repeat	1	38	(0)	1395552
29	22.0	0.0	2.6	chr16	1152655	1152732	(89185613)	+	G-rich	Low_complexity	1	78	(0)	1395553
41	13.4	3.1	4.0	chr16	1153014	1153110	(89185235)	+	(CCGCC)n	Simple_repeat	1	100	(0)	1395554
17	9.1	0.0	0.0	chr16	1299697	1299732	(89038613)	+	(T)n	Simple_repeat	1	36	(0)	1395715
20	26.3	3.5	2.3	chr16	1308924	1309008	(89029337)	+	(CGCCCC)n	Simple_repeat	1	88	(0)	1395731
217	31.8	0.0	4.3	chr16	1331714	1331782	(89006563)	+	MIR1_Amn	SINE/MIR	87	152	(78)	1395755
13	24.4	2.2	8.6	chr16	1678512	1678602	(88659743)	+	(GCCGAG)n	Simple_repeat	1	93	(0)	1396237
13	20.3	3.6	5.2	chr16	1678843	1678898	(88659447)	+	(GTGGCC)n	Simple_repeat	1	58	(0)	1396238
18	16.0	3.8	3.6	chr16	1771538	1771590	(88566755)	+	(GGCGG)n	Simple_repeat	1	55	(0)	1396372
1108	7.7	0.0	17.2	chr16	1930659	1930828	(88407517)	C	AluSp	SINE/Alu	(8)	305	171	1396665
15	16.3	0.0	2.8	chr16	2022852	2022887	(88315458)	+	(CCCCTC)n	Simple_repeat	1	36	(0)	1396807
11	28.0	0.0	0.0	chr16	2027541	2027579	(88310766)	+	(GTGCGT)n	Simple_repeat	1	39	(0)	1396811
19	31.7	0.0	2.8	chr16	2027678	2027748	(88310597)	+	(GT)n	Simple_repeat	1	71	(0)	1396812
16	22.6	0.0	0.0	chr16	2038401	2038433	(88299912)	+	(C)n	Simple_repeat	1	33	(0)	1396822
12	13.1	2.7	5.3	chr16	2047761	2047797	(88290548)	+	(CGGCTC)n	Simple_repeat	1	38	(0)	1396835
13	19.5	0.0	2.7	chr16	2048028	2048064	(88290281)	+	(GCGCG)n	Simple_repeat	1	37	(0)	1396836
27	18.1	8.6	3.6	chr16	2155964	2156037	(88182308)	+	G-rich	Low_complexity	51	133	(0)	1396970
14	20.7	2.6	0.0	chr16	2156040	2156078	(88182267)	+	(GTCC)n	Simple_repeat	1	40	(0)	1396971
240	26.3	5.7	2.0	chr16	2156098	2156198	(88182147)	C	L2b	LINE/L2	(0)	3375	3271	1396972
736	25.7	1.5	1.0	chr16	2156210	2156402	(88181943)	C	MER20	DNA/hAT-Charlie	(0)	219	26	1396973
223	33.8	8.5	3.0	chr16	2156555	2156749	(88181596)	C	L2b	LINE/L2	(301)	3125	2929	1396972
13	10.4	2.9	5.6	chr16	2196040	2196074	(88142271)	+	G-rich	Low_complexity	1	36	(0)	1397009
15	21.9	1.9	3.8	chr16	2196218	2196269	(88142076)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1397010
226	28.8	13.6	0.0	chr16	2205831	2205972	(88132373)	+	MIRc	SINE/MIR	11	185	(83)	1397038
17	15.3	2.7	0.0	chr16	2251462	2251498	(88086847)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	1397109
2094	11.3	0.7	2.0	chr16	2296236	2296535	(88041810)	C	AluSz	SINE/Alu	(16)	296	1	1397164
257	32.1	14.2	2.5	chr16	2296673	2296870	(88041475)	+	MLT1J	LTR/ERVL-MaLR	43	267	(245)	1397165
15	3.8	3.2	6.2	chr16	2340581	2340611	(87997734)	+	(GGC)n	Simple_repeat	1	32	(0)	1397249
461	13.9	3.4	0.2	chr16	2750735	2750826	(87587519)	+	L1M	LINE/L1	5336	5428	(872)	1397875
2135	14.2	0.6	0.0	chr16	2751161	2751471	(87586874)	+	AluSq2	SINE/Alu	1	313	(0)	1397877
3614	15.3	4.5	7.0	chr16	2795269	2795578	(87542767)	C	L1M4	LINE/L1	(1300)	5700	5395	1397936
2377	16.9	12.2	0.4	chr16	2795579	2796105	(87542240)	C	LTR8B	LTR/ERV1	(0)	820	223	1397941
421	30.1	7.2	3.0	chr16	2970819	2971017	(87367328)	+	MIRb	SINE/MIR	22	229	(39)	1398276
714	17.0	15.2	0.7	chr16	2981043	2981183	(87357162)	C	AluSx	SINE/Alu	(15)	297	133	1398284
2036	13.7	0.0	0.3	chr16	2981187	2981478	(87356867)	C	AluSz	SINE/Alu	(21)	291	1	1398285
2512	18.6	5.7	1.2	chr16	3149106	3149611	(87188734)	C	LTR53B	LTR/ERVL	(0)	533	4	1398594
252	27.5	5.9	0.0	chr16	3149957	3150036	(87188309)	+	MIRb	SINE/MIR	155	239	(29)	1398595
18	7.7	0.0	0.0	chr16	3150096	3150123	(87188222)	+	(TGGGC)n	Simple_repeat	1	28	(0)	1398596
2132	6.8	0.0	5.1	chr16	3151121	3151445	(87186900)	C	AluSp	SINE/Alu	(0)	313	2	1398598
426	15.7	0.0	0.0	chr16	3152609	3152678	(87185667)	C	tRNA-Pro-CCY	tRNA	(4)	71	2	1398602
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
419	21.1	8.2	5.4	chr16	3153172	3153301	(87185044)	+	L1MC5	LINE/L1	8995	9128	(176)	1398604
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
2338	9.3	0.0	0.0	chr16	3612248	3612549	(86725796)	C	AluSq	SINE/Alu	(10)	303	2	1399486
888	5.2	0.8	14.9	chr16	3612554	3612707	(86725638)	C	FLAM_C	SINE/Alu	(10)	133	2	1399487
282	31.2	3.1	1.1	chr16	3612751	3612844	(86725501)	C	L2b	LINE/L2	(667)	2752	2657	1399485
2240	8.6	0.0	5.5	chr16	3803207	3803532	(86534813)	+	AluSg4	SINE/Alu	1	308	(2)	1399833
23	27.5	1.8	4.5	chr16	3879962	3879999	(86458346)	+	(GGCGAG)n	Simple_repeat	1	74	(37)	1399963
15	23.1	1.9	3.6	chr16	3880000	3880053	(86458292)	+	(GCGA)n	Simple_repeat	1	55	(0)	1399964
23	27.5	1.8	4.5	chr16	3880054	3880070	(86458275)	+	(GGCGAG)n	Simple_repeat	75	111	(0)	1399963
14	19.0	6.2	4.3	chr16	3880353	3880417	(86457928)	+	(GCCCGCG)n	Simple_repeat	1	69	(0)	1399965
39	6.0	4.1	2.6	chr16	3880450	3880522	(86457823)	+	(CGC)n	Simple_repeat	1	76	(0)	1399966
15	0.0	0.0	4.3	chr16	4272286	4272308	(86066037)	+	(AGGA)n	Simple_repeat	1	23	(0)	1400802
2069	8.5	1.1	0.4	chr16	4308113	4308383	(86029962)	C	AluSg	SINE/Alu	(37)	273	1	1400909
22	24.8	1.9	6.4	chr16	4315720	4315725	(86022620)	+	(CCCCCCT)n	Simple_repeat	1	14	(96)	1400931
21	15.8	5.8	4.1	chr16	4315726	4315794	(86022551)	+	(TCCC)n	Simple_repeat	1	73	(0)	1400932
22	24.8	1.9	6.4	chr16	4315795	4315827	(86022518)	+	(CCCCCCT)n	Simple_repeat	15	110	(0)	1400931
18	14.9	0.0	2.6	chr16	4315896	4315934	(86022411)	+	G-rich	Low_complexity	1	39	(0)	1400933
610	24.8	8.6	3.3	chr16	5508085	5508338	(84830007)	C	MLT1E1A	LTR/ERVL-MaLR	(5)	675	300	1403430
224	13.5	0.0	0.0	chr16	8868120	8868156	(81470189)	C	MIRc	SINE/MIR	(120)	148	112	1410009
1807	15.1	0.0	2.1	chr16	8870672	8870950	(81467395)	+	AluJb	SINE/Alu	1	273	(39)	1410016
2708	21.1	2.1	3.4	chr16	8870951	8871433	(81466912)	+	L1MB7	LINE/L1	5700	6184	(0)	1410013
2116	15.1	0.0	0.0	chr16	8871439	8871749	(81466596)	+	AluSz	SINE/Alu	1	311	(1)	1410017
15	7.8	0.0	6.5	chr16	9091355	9091385	(81246960)	+	(CTC)n	Simple_repeat	1	31	(0)	1410574
8735	10.3	14.8	1.2	chr16	9183368	9184727	(81153618)	C	LTR12C	LTR/ERV1	(0)	1579	2	1410791
327	32.4	2.7	0.7	chr16	9598744	9598889	(80739456)	+	MIRb	SINE/MIR	2	150	(118)	1411693
606	28.2	2.2	3.2	chr16	9598901	9599087	(80739258)	C	MIRb	SINE/MIR	(42)	226	42	1411694
2203	11.3	0.0	0.0	chr16	10361841	10362124	(79976221)	C	AluSz	SINE/Alu	(28)	284	1	1413335
1624	21.8	6.2	10.1	chr16	10362125	10362571	(79975774)	C	LTR77	LTR/ERV1	(178)	444	2	1413332
3365	14.8	1.8	8.0	chr16	10787205	10787857	(79550488)	+	LTR9	LTR/ERV1	1	612	(0)	1414220
276	30.6	12.2	3.4	chr16	10787858	10787908	(79550437)	+	MIRb	SINE/MIR	118	169	(99)	1414219
1786	17.0	0.3	3.5	chr16	11101791	11102107	(79236238)	C	AluJo	SINE/Alu	(0)	312	6	1414924
16	14.8	0.0	4.9	chr16	11494436	11494476	(78843869)	+	A-rich	Low_complexity	1	41	(0)	1415816
14	11.9	2.4	7.0	chr16	11796979	11797020	(78541325)	+	(GCCCCC)n	Simple_repeat	1	43	(0)	1416499
23	17.5	6.9	0.0	chr16	11797030	11797087	(78541258)	+	(CG)n	Simple_repeat	1	62	(0)	1416500
36	25.6	1.2	7.0	chr16	11797137	11797305	(78541040)	+	(GCG)n	Simple_repeat	1	171	(0)	1416501
2314	10.5	0.7	0.0	chr16	11813478	11813783	(78524562)	+	AluSx	SINE/Alu	2	309	(3)	1416547
643	25.0	7.8	0.5	chr16	11814015	11814203	(78524142)	C	L1MD2	LINE/L1	(10)	6349	6146	1416548
2018	7.8	0.0	6.4	chr16	12525391	12525686	(77812659)	+	AluSx1	SINE/Alu	1	277	(35)	1418116
16	5.2	0.0	0.0	chr16	12525690	12525709	(77812636)	+	(C)n	Simple_repeat	1	20	(0)	1418117
401	30.8	5.4	4.1	chr16	14070771	14070990	(76267355)	+	MIRb	SINE/MIR	15	237	(31)	1421470
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
24	29.2	0.0	5.8	chr16	14071388	14071446	(76266899)	+	G-rich	Low_complexity	1	120	(0)	1421472
13	7.6	1.5	7.6	chr16	14071539	14071573	(76266772)	+	G-rich	Low_complexity	1	32	(0)	1421473
42	5.5	0.0	0.0	chr16	14302004	14302062	(76036283)	+	(CCCCCA)n	Simple_repeat	1	59	(0)	1421813
22	24.1	5.1	0.0	chr16	14302117	14302194	(76036151)	+	(GCCGCC)n	Simple_repeat	1	82	(0)	1421814
1595	10.8	8.1	2.6	chr16	14308508	14308776	(76029569)	C	AluJr	SINE/Alu	(22)	290	6	1421818
213	37.8	1.1	0.0	chr16	14369929	14370018	(75968327)	C	MIR	SINE/MIR	(12)	250	160	1421983
426	32.7	4.1	4.0	chr16	15427655	15427816	(74910529)	C	MIRc	SINE/MIR	(101)	167	3	1424378
229	27.4	9.3	0.0	chr16	15428273	15428418	(74909927)	C	L1ME4a	LINE/L1	(5)	6119	5959	1424379
436	26.3	17.1	2.2	chr16	15509315	15509493	(74828852)	+	MIRb	SINE/MIR	13	223	(45)	1424569
225	31.4	6.8	3.9	chr16	15509457	15509641	(74828704)	C	MIRb	SINE/MIR	(65)	197	4	1424570
662	25.8	0.0	0.7	chr16	15573093	15573244	(74765101)	C	LTR39	LTR/ERV1	(14)	769	619	1424742
2598	13.2	1.3	7.7	chr16	15573253	15573744	(74764601)	C	LTR8	LTR/ERV1	(9)	682	223	1424743
3917	16.5	1.9	3.8	chr16	15577392	15578118	(74760227)	C	MER50	LTR/ERV1	(21)	713	1	1424753
522	20.0	4.9	14.2	chr16	15578129	15578230	(74760115)	C	MLT1C	LTR/ERVL-MaLR	(190)	277	187	1424751
867	17.6	0.0	0.0	chr16	15578231	15578361	(74759984)	C	FLAM_A	SINE/Alu	(10)	132	2	1424754
2188	12.5	1.0	0.0	chr16	15592930	15593233	(74745112)	+	AluSz	SINE/Alu	2	308	(4)	1424789
554	18.4	11.4	1.3	chr16	15593245	15593393	(74744952)	+	MER34	LTR/ERV1	372	537	(5)	1424790
412	23.2	8.1	6.0	chr16	19119462	19119594	(71218751)	C	Charlie8	DNA/hAT-Charlie	(2292)	136	1	1432741
368	30.6	14.1	6.2	chr16	19488469	19488935	(70849410)	+	L2a	LINE/L2	2917	3426	(0)	1433690
18	8.5	0.0	0.0	chr16	21502548	21502572	(68835773)	+	(G)n	Simple_repeat	1	25	(0)	1438016
593	33.8	0.0	1.5	chr16	21555411	21555614	(68782731)	+	MIRb	SINE/MIR	46	246	(22)	1438132
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
31	24.2	1.4	0.0	chr16	23143537	23143624	(67194721)	+	GA-rich	Low_complexity	1	89	(0)	1441504
884	19.9	3.2	0.0	chr16	23143700	23143880	(67194465)	C	MER20	DNA/hAT-Charlie	(4)	215	29	1441505
265	23.9	9.3	6.4	chr16	23509906	23510030	(66828315)	+	MIRb	SINE/MIR	116	244	(24)	1442436
15	29.0	0.0	4.4	chr16	23510188	23510255	(66828090)	+	(CCCGGC)n	Simple_repeat	1	68	(0)	1442437
23	30.6	1.2	0.0	chr16	23510378	23510461	(66827884)	+	(CCGCCG)n	Simple_repeat	1	85	(0)	1442438
451	8.2	1.4	1.4	chr16	23510637	23510710	(66827635)	C	MER53	DNA/hAT	(0)	193	120	1442439
1294	13.1	0.4	7.8	chr16	23510711	23510906	(66827439)	C	AluJb	SINE/Alu	(16)	296	119	1442440
330	21.3	13.9	11.0	chr16	23596815	23596927	(66741418)	+	HAL1b	LINE/L1	1747	1843	(578)	1442649
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
330	21.3	13.9	11.0	chr16	23597463	23597585	(66740760)	+	HAL1b	LINE/L1	1844	1991	(430)	1442649
2456	9.2	0.0	0.0	chr16	23597683	23597987	(66740358)	+	AluSc	SINE/Alu	2	306	(3)	1442651
318	22.1	10.3	1.7	chr16	24729127	24729241	(65609104)	C	MIRb	SINE/MIR	(70)	198	73	1445418
18	0.0	0.0	0.0	chr16	24729302	24729321	(65609024)	+	(T)n	Simple_repeat	1	20	(0)	1445419
46	5.7	0.0	0.0	chr16	24729669	24729723	(65608622)	+	(GCG)n	Simple_repeat	1	55	(0)	1445420
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
2426	8.6	0.3	0.0	chr16	27106800	27107100	(63231245)	C	AluSx1	SINE/Alu	(10)	302	1	1450378
2159	19.3	5.0	0.2	chr16	27107256	27107692	(63230653)	+	LTR71B	LTR/ERV1	152	610	(0)	1450379
394	32.5	1.7	1.7	chr16	27367951	27368122	(62970223)	+	MIR	SINE/MIR	20	191	(71)	1451003
611	27.8	2.8	3.4	chr16	27368483	27368637	(62969708)	+	MIR	SINE/MIR	71	225	(37)	1451004
699	28.4	4.7	0.9	chr16	27550627	27550850	(62787495)	C	MIRb	SINE/MIR	(0)	268	36	1451356
314	28.6	3.9	0.0	chr16	28163644	28163741	(62174604)	C	MIRc	SINE/MIR	(116)	152	51	1452768
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
1287	16.7	8.1	6.5	chr16	28609484	28609776	(61728569)	+	AluJr4	SINE/Alu	3	300	(12)	1453960
32	5.3	0.0	0.0	chr16	28610252	28610290	(61728055)	+	(T)n	Simple_repeat	1	39	(0)	1453961
22	0.0	0.0	0.0	chr16	28822936	28822959	(61515386)	+	(C)n	Simple_repeat	1	24	(0)	1454525
2262	10.9	0.0	0.7	chr16	28862927	28863230	(61475115)	C	AluSx	SINE/Alu	(10)	302	1	1454613
13	16.5	0.0	0.0	chr16	28863250	28863276	(61475069)	+	(CCA)n	Simple_repeat	1	27	(0)	1454614
13	29.6	0.0	0.0	chr16	28863277	28863294	(61475051)	+	(CCCACC)n	Simple_repeat	2	46	(0)	1454615
28	0.0	3.3	0.0	chr16	28925338	28925367	(61412978)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	1454764
334	32.0	21.9	3.0	chr16	28925804	28926170	(61412175)	+	L2	LINE/L2	2357	2812	(607)	1454765
4999	7.1	0.2	0.3	chr16	28926201	28926838	(61411507)	+	L1PA10	LINE/L1	5522	6158	(10)	1454766
289	38.2	3.0	0.0	chr16	29177137	29177267	(61161078)	+	MIR	SINE/MIR	93	227	(35)	1455309
1946	16.8	3.3	4.1	chr16	29227769	29228088	(61110257)	C	MLT1A0	LTR/ERVL-MaLR	(34)	331	2	1455377
234	28.7	3.8	3.8	chr16	29228177	29228281	(61110064)	C	MIRb	SINE/MIR	(89)	179	75	1455379
18	0.0	0.0	0.0	chr16	29284193	29284212	(61054133)	+	(GT)n	Simple_repeat	1	20	(0)	1455460
12	28.0	0.0	0.0	chr16	29284651	29284689	(61053656)	+	(GGT)n	Simple_repeat	1	39	(0)	1455461
267	28.9	3.0	1.0	chr16	29291581	29291678	(61046667)	+	MIRc	SINE/MIR	104	203	(65)	1455467
12	16.3	0.0	7.5	chr16	29663164	29663203	(60675142)	+	(GGTG)n	Simple_repeat	1	40	(0)	1456240
1557	22.6	7.9	4.8	chr16	29679667	29679959	(60658386)	C	LTR14C	LTR/ERVK	(41)	546	152	1456282
2362	5.1	1.0	0.0	chr16	29679960	29680255	(60658090)	C	AluY	SINE/Alu	(12)	299	1	1456283
20	16.1	5.3	1.7	chr16	29805896	29805952	(60532393)	+	(CTCGCG)n	Simple_repeat	1	60	(0)	1456607
24	25.6	2.1	3.2	chr16	29806010	29806102	(60532243)	+	(CCCCTC)n	Simple_repeat	1	95	(0)	1456608
25	18.8	0.0	0.0	chr16	29810099	29810149	(60528196)	+	(GGCAGC)n	Simple_repeat	1	51	(0)	1456613
17	20.2	1.6	6.2	chr16	29898141	29898158	(60440187)	+	(CTCCCCT)n	Simple_repeat	1	45	(20)	1456812
14	12.8	0.0	7.5	chr16	29898159	29898198	(60440147)	+	(CTCCC)n	Simple_repeat	1	40	(0)	1456813
17	20.2	1.6	6.2	chr16	29898199	29898204	(60440141)	+	(CTCCCCT)n	Simple_repeat	46	65	(0)	1456812
32	25.2	1.2	1.1	chr16	29898383	29898468	(60439877)	+	(CT)n	Simple_repeat	1	87	(0)	1456814
20	13.9	0.0	0.0	chr16	30407981	30408012	(59930333)	+	(G)n	Simple_repeat	1	32	(0)	1457955
26	33.6	0.0	0.0	chr16	30408067	30408162	(59930183)	+	GA-rich	Low_complexity	1	96	(0)	1457956
16	19.6	0.0	5.8	chr16	30526709	30526760	(59811585)	+	(GCCCCC)n	Simple_repeat	1	52	(0)	1458285
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
270	32.2	7.0	0.7	chr16	30887626	30887772	(59450573)	+	MIR3	SINE/MIR	32	188	(20)	1459106
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
14	23.0	0.0	0.0	chr16	30923682	30923733	(59414612)	+	(CCCCTTT)n	Simple_repeat	1	52	(0)	1459206
17	21.5	0.0	3.9	chr16	30923794	30923845	(59414500)	+	G-rich	Low_complexity	1	52	(0)	1459207
12	21.8	6.5	3.0	chr16	30924067	30924128	(59414217)	+	G-rich	Low_complexity	1	66	(0)	1459208
464	33.0	2.6	1.6	chr16	30941809	30941996	(59396349)	C	MIRc	SINE/MIR	(61)	207	18	1459254
13	27.9	1.7	3.3	chr16	30949046	30949105	(59389240)	+	(GCTCCG)n	Simple_repeat	1	61	(0)	1459271
21	19.2	3.2	3.1	chr16	30958013	30958075	(59380270)	+	(CGC)n	Simple_repeat	1	65	(0)	1459289
12	31.9	0.0	4.5	chr16	30985333	30985399	(59352946)	+	(TCCC)n	Simple_repeat	1	67	(0)	1459337
13	7.1	12.5	3.7	chr16	30997085	30997132	(59341213)	+	(GGATCAG)n	Simple_repeat	1	54	(0)	1459354
20	15.9	0.0	0.0	chr16	46831259	46831293	(43507052)	+	(GC)n	Simple_repeat	1	35	(0)	1466115
194	26.1	17.8	0.0	chr16	46831759	46831846	(43506499)	C	L2c	LINE/L2	(0)	3387	3281	1466116
862	24.8	6.8	1.8	chr16	46831857	46831957	(43506388)	C	Charlie10	DNA/hAT-Charlie	(0)	2822	2711	1466117
2093	12.0	0.0	3.5	chr16	46831958	46832274	(43506071)	+	AluJr	SINE/Alu	1	306	(6)	1466118
9246	2.9	0.1	25.2	chr16	47180353	47182198	(43156147)	+	SVA_D	Retroposon/SVA	5	1386	(0)	1466836
2269	7.3	0.3	4.8	chr16	48624095	48624408	(41713937)	+	AluSg	SINE/Alu	1	300	(10)	1469125
312	23.3	2.5	5.4	chr16	48624416	48624562	(41713783)	C	MER5B	DNA/hAT-Charlie	(40)	149	1	1469126
25	22.8	2.5	2.4	chr16	50153139	50153218	(40185127)	+	G-rich	Low_complexity	1	82	(0)	1471932
27	6.1	0.0	0.0	chr16	50245954	50245988	(40092357)	+	(TGGGG)n	Simple_repeat	1	35	(0)	1472119
20	11.0	0.0	4.7	chr16	50246029	50246071	(40092274)	+	(CCCCCG)n	Simple_repeat	1	43	(0)	1472120
13	26.8	0.0	6.2	chr16	50368781	50368845	(39969500)	+	(CCCGGC)n	Simple_repeat	1	65	(0)	1472323
18	10.5	7.3	0.0	chr16	50369180	50369222	(39969123)	+	(TCTGTC)n	Simple_repeat	1	46	(0)	1472324
64	30.0	2.6	2.9	chr16	50369211	50369478	(39968867)	+	(TCCT)n	Simple_repeat	1	275	(0)	1472325
435	31.4	11.6	4.5	chr16	50657223	50657486	(39680859)	C	MLT1K	LTR/ERVL-MaLR	(116)	479	195	1472931
201	28.7	13.7	0.0	chr16	50658165	50658265	(39680080)	+	MIRc	SINE/MIR	16	132	(136)	1472932
171	24.0	5.3	4.2	chr16	50692531	50693302	(39645043)	+	(TG)n	Simple_repeat	1	813	(0)	1473001
13	18.1	2.0	6.0	chr16	50742150	50742198	(39596147)	+	G-rich	Low_complexity	1	50	(0)	1473097
214	6.2	3.0	0.0	chr16	50742554	50742585	(39595760)	C	MIR1_Amn	SINE/MIR	(79)	151	119	1473098
548	26.4	0.6	6.2	chr16	53055421	53055598	(37282747)	C	MER5B	DNA/hAT-Charlie	(6)	172	5	1477119
14	18.3	2.7	0.0	chr16	53099565	53099601	(37238744)	+	(TCCTTCC)n	Simple_repeat	1	38	(0)	1477231
11	23.1	1.7	6.8	chr16	54931059	54931116	(35407229)	+	(GGCCAGA)n	Simple_repeat	1	59	(0)	1480396
305	28.3	13.1	3.0	chr16	56422212	56422375	(33915970)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	1483021
2533	18.1	9.6	3.1	chr16	56426033	56426502	(33911843)	+	L1MB8	LINE/L1	5525	6029	(149)	1483027
514	34.2	5.7	3.1	chr16	56729488	56729879	(33608466)	+	L2b	LINE/L2	2952	3354	(21)	1483651
15	3.8	0.0	9.1	chr16	56730007	56730039	(33608306)	+	(GCCCC)n	Simple_repeat	1	33	(0)	1483652
24	9.5	0.0	0.0	chr16	56945849	56945882	(33392463)	+	(C)n	Simple_repeat	1	34	(0)	1484012
345	27.6	2.0	0.0	chr16	56945884	56945981	(33392364)	+	MER103C	DNA/hAT-Charlie	64	163	(134)	1484013
14	15.4	0.0	4.9	chr16	56946149	56946165	(33392180)	+	(TTTTTA)n	Simple_repeat	1	17	(0)	1484014
2143	10.5	0.0	0.0	chr16	56946166	56946461	(33391884)	+	AluSx1	SINE/Alu	1	296	(16)	1484015
2442	10.0	0.0	0.0	chr16	57064642	57064952	(33273393)	+	AluSq2	SINE/Alu	1	311	(2)	1484275
2438	7.7	1.0	0.3	chr16	57370661	57370958	(32967387)	C	AluSx	SINE/Alu	(12)	300	1	1484946
273	15.2	2.1	0.0	chr16	57371024	57371069	(32967276)	+	MIR3	SINE/MIR	109	155	(53)	1484947
15	13.9	0.0	0.0	chr16	57371223	57371251	(32967094)	+	(G)n	Simple_repeat	1	29	(0)	1484948
191	30.9	1.8	0.0	chr16	57463306	57463360	(32874985)	+	MIRb	SINE/MIR	26	81	(187)	1485116
12	12.0	3.7	0.0	chr16	57536735	57536761	(32801584)	+	G-rich	Low_complexity	1	28	(0)	1485265
231	29.4	7.7	0.7	chr16	57536977	57537089	(32801256)	+	MIR3	SINE/MIR	62	186	(82)	1485266
45	24.8	1.2	6.0	chr16	57691050	57691213	(32647132)	+	GA-rich	Low_complexity	1	166	(0)	1485584
307	28.9	17.6	2.6	chr16	57691615	57691801	(32646544)	+	MIRb	SINE/MIR	10	231	(37)	1485585
15	13.9	0.0	0.0	chr16	57694976	57694999	(32643346)	+	(GT)n	Simple_repeat	1	24	(0)	1485594
801	29.9	2.6	0.5	chr16	57695296	57695517	(32642828)	+	MIRb	SINE/MIR	31	257	(11)	1485595
250	25.0	2.7	0.0	chr16	58128540	58128611	(32209734)	+	L2b	LINE/L2	3302	3375	(0)	1486503
199	33.7	1.1	0.0	chr16	58128672	58128757	(32209588)	C	MIRb	SINE/MIR	(95)	173	87	1486504
17	15.3	0.0	2.6	chr16	58434138	58434176	(31904169)	+	(CACCCC)n	Simple_repeat	1	39	(0)	1487090
2375	6.6	0.0	0.7	chr16	58622031	58622319	(31716026)	+	AluY	SINE/Alu	1	287	(24)	1487462
1041	19.3	0.4	12.7	chr16	58622320	58622477	(31715868)	+	L1MC1	LINE/L1	6197	6333	(0)	1487460
2173	12.4	0.0	0.3	chr16	58622578	58622876	(31715469)	+	AluSq2	SINE/Alu	14	311	(2)	1487463
3900	11.0	2.3	1.4	chr16	65768863	65769426	(24568919)	C	MER61E	LTR/ERV1	(0)	569	1	1498482
3084	18.7	0.7	1.8	chr16	65769427	65769719	(24568626)	+	MER72	LTR/ERV1	261	550	(172)	1498481
482	30.9	15.0	6.4	chr16	66516003	66516582	(23821763)	C	L2c	LINE/L2	(3)	3384	2741	1499877
464	26.1	5.7	2.8	chr16	66516691	66516905	(23821440)	C	L2a	LINE/L2	(25)	3401	3133	1499878
15	18.3	7.5	4.2	chr16	66751661	66751727	(23586618)	+	(GCC)n	Simple_repeat	1	72	(0)	1500336
13	28.9	1.4	5.3	chr16	66751777	66751850	(23586495)	+	(GGC)n	Simple_repeat	1	75	(0)	1500337
272	28.1	0.0	2.4	chr16	66752068	66752151	(23586194)	C	MIRc	SINE/MIR	(115)	153	72	1500338
2166	13.9	0.7	0.0	chr16	66978027	66978336	(23360009)	C	AluSz6	SINE/Alu	(0)	312	1	1500800
13	22.7	2.4	0.0	chr16	67170484	67170524	(23167821)	+	(CCGCCC)n	Simple_repeat	1	42	(0)	1501209
572	33.0	14.2	0.6	chr16	67183210	67183556	(23154789)	+	L2b	LINE/L2	2927	3328	(47)	1501228
15	13.9	0.0	0.0	chr16	67241115	67241138	(23097207)	+	(C)n	Simple_repeat	1	24	(0)	1501301
260	35.8	7.4	1.1	chr16	67241538	67241726	(23096619)	C	L2c	LINE/L2	(6)	3381	3180	1501302
17	17.4	2.6	8.9	chr16	67248938	67249014	(23089331)	+	(GGCGGCC)n	Simple_repeat	1	79	(0)	1501308
22	12.0	4.4	0.0	chr16	67431041	67431085	(22907260)	+	(CCCCGC)n	Simple_repeat	1	47	(0)	1501626
19	12.6	4.4	2.1	chr16	67431159	67431194	(22907151)	+	(CCCCG)n	Simple_repeat	1	80	(0)	1501627
21	7.7	4.7	2.2	chr16	67431195	67431237	(22907108)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	1501628
12	17.6	0.0	0.0	chr16	67432245	67432271	(22906074)	+	G-rich	Low_complexity	1	27	(0)	1501629
15	17.8	2.6	0.0	chr16	67562793	67562830	(22775515)	+	(CGGCGC)n	Simple_repeat	1	39	(0)	1501892
27	23.7	0.0	1.4	chr16	67562863	67562968	(22775377)	+	(GCCC)n	Simple_repeat	1	104	(0)	1501893
12	12.8	5.6	2.6	chr16	67883749	67883784	(22454561)	+	G-rich	Low_complexity	1	38	(0)	1502523
2127	11.1	1.0	4.9	chr16	67939188	67939512	(22398833)	C	AluSz6	SINE/Alu	(0)	312	1	1502620
1970	10.8	2.2	0.8	chr16	68040950	68041217	(22297128)	+	AluSx3	SINE/Alu	2	273	(38)	1502818
216	15.4	5.8	4.4	chr16	68080248	68080315	(22258030)	+	MIR1_Amn	SINE/MIR	85	153	(77)	1502894
288	7.3	2.4	0.0	chr16	68090212	68090252	(22248093)	+	MIRb	SINE/MIR	189	230	(38)	1502912
30	3.5	0.0	0.0	chr16	68090323	68090352	(22247993)	+	(AC)n	Simple_repeat	1	30	(0)	1502913
18	20.6	1.9	3.6	chr16	68264487	68264540	(22073805)	+	(CGG)n	Simple_repeat	1	55	(0)	1503253
12	27.1	0.0	3.9	chr16	68264971	68265022	(22073323)	+	(TGTGAC)n	Simple_repeat	1	52	(0)	1503254
13	8.4	10.0	2.3	chr16	68265179	68265218	(22073127)	+	(TGGAGCGC)n	Simple_repeat	1	44	(0)	1503255
424	26.5	4.3	1.5	chr16	69530480	69530613	(20807732)	+	MIR	SINE/MIR	23	160	(102)	1506009
13	14.0	4.7	4.4	chr16	69565635	69565677	(20772668)	+	(CTCTG)n	Simple_repeat	1	45	(0)	1506104
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
14	19.3	2.3	2.3	chr16	69566370	69566412	(20771933)	+	G-rich	Low_complexity	1	44	(0)	1506106
290	25.4	14.3	8.8	chr16	69761746	69761835	(20576510)	+	L2a	LINE/L2	3289	3396	(30)	1506511
810	14.3	9.3	1.7	chr16	69761836	69762013	(20576332)	+	MER53	DNA/hAT	1	193	(0)	1506512
290	25.4	14.3	8.8	chr16	69762014	69762047	(20576298)	+	L2a	LINE/L2	3397	3421	(5)	1506511
249	25.9	4.5	2.3	chr16	69762042	69762128	(20576217)	+	MIR	SINE/MIR	102	190	(72)	1506513
1155	9.1	9.8	0.0	chr16	70155282	70155446	(20182899)	C	AluSq	SINE/Alu	(13)	300	118	1507354
561	19.4	3.0	0.0	chr16	70155447	70155544	(20182801)	+	AluSc8	SINE/Alu	112	212	(99)	1507355
1065	8.8	0.0	0.0	chr16	70155554	70155689	(20182656)	C	AluSp	SINE/Alu	(177)	136	1	1507356
971	20.6	17.3	2.0	chr16	70155801	70156053	(20182292)	C	AluSz6	SINE/Alu	(11)	301	2	1507357
24	9.5	0.0	0.0	chr16	70289739	70289781	(20048564)	+	(C)n	Simple_repeat	1	43	(0)	1507629
28	3.3	0.0	0.0	chr16	70439018	70439048	(19899297)	+	(GCC)n	Simple_repeat	1	31	(0)	1507979
17	28.0	1.7	0.0	chr16	70439121	70439131	(19899214)	+	(CCCGCC)n	Simple_repeat	1	27	(34)	1507980
16	14.7	5.3	0.0	chr16	70439132	70439169	(19899176)	+	(CGC)n	Simple_repeat	1	40	(0)	1507981
17	28.0	1.7	0.0	chr16	70439170	70439180	(19899165)	+	(CCCGCC)n	Simple_repeat	28	61	(0)	1507980
16	0.0	0.0	0.0	chr16	71467961	71467977	(18870368)	+	(G)n	Simple_repeat	1	17	(0)	1509741
2183	10.9	1.0	0.0	chr16	71468075	71468359	(18869986)	C	AluSq2	SINE/Alu	(25)	288	1	1509742
375	30.1	3.1	0.8	chr16	71484168	71484291	(18854054)	+	L2b	LINE/L2	3228	3354	(21)	1509763
1305	17.8	4.6	3.9	chr16	71484733	71485037	(18853308)	+	Charlie4a	DNA/hAT-Charlie	38	344	(164)	1509765
39	2.3	2.3	0.0	chr16	71809207	71809250	(18529095)	+	(GGGGGTAG)n	Simple_repeat	1	45	(0)	1510412
17	24.6	1.4	5.3	chr16	71884005	71884078	(18454267)	+	(GCCGG)n	Simple_repeat	1	75	(0)	1510563
1414	14.9	1.3	4.8	chr16	71894559	71894806	(18443539)	C	AluJb	SINE/Alu	(45)	267	29	1510590
2202	13.4	0.0	0.3	chr16	74574607	74574913	(15763432)	+	AluSz6	SINE/Alu	7	312	(0)	1514945
15	8.9	4.2	0.0	chr16	74574914	74574937	(15763408)	+	(GA)n	Simple_repeat	1	25	(0)	1514946
2148	11.8	0.0	2.6	chr16	74574960	74575263	(15763082)	+	AluSg7	SINE/Alu	2	297	(12)	1514947
528	23.1	6.5	3.4	chr16	74575311	74575458	(15762887)	C	MER104	DNA/TcMar-Tc2	(25)	156	4	1514948
955	10.7	0.0	1.5	chr16	75115914	75116044	(15222301)	C	FLAM_C	SINE/Alu	(14)	129	1	1516114
208	18.2	12.7	0.0	chr16	75116297	75116351	(15221994)	C	MIRc	SINE/MIR	(99)	169	107	1516115
34	24.6	0.0	2.3	chr16	75234052	75234138	(15104207)	+	(CA)n	Simple_repeat	1	87	(0)	1516365
44	0.0	0.0	0.0	chr16	75234165	75234202	(15104143)	+	(AC)n	Simple_repeat	1	38	(0)	1516366
11	18.9	0.0	7.1	chr16	75265853	75265894	(15072451)	+	G-rich	Low_complexity	1	42	(0)	1516406
17	27.5	3.3	0.0	chr16	75265985	75266045	(15072300)	+	(GCC)n	Simple_repeat	1	63	(0)	1516407
194	19.7	14.3	1.5	chr16	75432800	75432866	(14905479)	+	L3	LINE/CR1	3852	3928	(171)	1516786
13	11.6	3.6	0.0	chr16	75517522	75517549	(14820796)	+	(CTGCT)n	Simple_repeat	1	29	(0)	1516962
2510	5.8	0.3	1.0	chr16	75517726	75518035	(14820310)	+	AluSz	SINE/Alu	1	308	(4)	1516963
604	24.6	19.8	1.8	chr16	75579294	75579512	(14758833)	C	MLT1K	LTR/ERVL-MaLR	(100)	495	228	1517083
4076	11.5	2.8	0.5	chr16	77233958	77234576	(13103769)	+	MER41B	LTR/ERV1	1	634	(0)	1519497
19	19.2	0.0	0.0	chr16	79770190	79770225	(10568120)	+	(GT)n	Simple_repeat	1	36	(0)	1524121
15	10.0	0.0	0.0	chr16	79770262	79770283	(10568062)	+	(GT)n	Simple_repeat	1	22	(0)	1524121
13	17.6	0.0	6.8	chr16	79770540	79770583	(10567762)	+	(CCCGC)n	Simple_repeat	1	44	(0)	1524122
18	15.5	0.0	0.0	chr16	79770586	79770615	(10567730)	+	A-rich	Low_complexity	1	30	(0)	1524123
13	15.9	4.2	6.0	chr16	81040322	81040369	(9297976)	+	(GGT)n	Simple_repeat	1	50	(0)	1526366
12	23.1	2.0	4.0	chr16	81445623	81445671	(8892674)	+	G-rich	Low_complexity	1	50	(0)	1527290
211	28.9	7.3	1.3	chr16	81458144	81458220	(8880125)	+	Tigger19b	DNA/TcMar-Tigger	296	377	(173)	1527305
196	18.6	10.6	0.0	chr16	81495883	81495941	(8842404)	+	MIR3	SINE/MIR	119	184	(24)	1527393
430	28.1	8.8	0.0	chr16	81496100	81496234	(8842111)	+	MIR	SINE/MIR	115	262	(0)	1527394
355	27.8	9.1	3.4	chr16	81496245	81496419	(8841926)	C	L2a	LINE/L2	(3)	3423	3238	1527395
1527	16.9	5.8	0.3	chr16	81637804	81638094	(8700251)	C	MLT1A0	LTR/ERVL-MaLR	(57)	308	1	1527680
407	26.7	2.8	3.0	chr16	81638095	81638251	(8700094)	C	MLT1D	LTR/ERVL-MaLR	(205)	262	107	1527681
2338	9.9	0.0	0.7	chr16	81737667	81737969	(8600376)	+	AluSz6	SINE/Alu	6	306	(6)	1527901
240	20.2	2.3	7.7	chr16	81738004	81738094	(8600251)	+	MER5B	DNA/hAT-Charlie	20	105	(73)	1527902
257	30.5	7.8	0.0	chr16	81738403	81738497	(8599848)	+	MIR1_Amn	SINE/MIR	87	189	(41)	1527903
4531	11.7	6.8	3.7	chr16	83888455	83889027	(6449318)	C	LTR19C	LTR/ERV1	(71)	708	111	1531790
2043	11.9	1.7	1.0	chr16	83889028	83889355	(6448990)	C	AluSz	SINE/Alu	(0)	312	1	1531792
2180	13.4	0.0	1.3	chr16	83889357	83889663	(6448682)	C	AluSx1	SINE/Alu	(9)	303	1	1531793
394	27.0	9.3	0.7	chr16	83992076	83992213	(6346132)	C	MER113	DNA/hAT-Charlie	(271)	250	100	1531992
275	30.4	8.1	2.6	chr16	83992668	83992819	(6345526)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1531993
231	38.4	5.2	2.0	chr16	83992707	83992855	(6345490)	C	MER5A	DNA/hAT-Charlie	(29)	160	7	1531993
2368	8.9	0.3	0.0	chr16	84114924	84115225	(6223120)	C	AluSg	SINE/Alu	(7)	303	1	1532172
1849	11.7	0.0	0.0	chr16	84246967	84247222	(6091123)	C	AluSx	SINE/Alu	(55)	257	2	1532427
1818	19.4	3.9	6.4	chr16	84593799	84594201	(5744144)	C	L1MB7	LINE/L1	(55)	6129	5731	1533162
77	29.6	3.0	5.7	chr16	84618272	84618768	(5719577)	+	(CCTCTC)n	Simple_repeat	1	512	(0)	1533213
987	10.4	0.0	1.5	chr16	84881641	84881775	(5456570)	C	AluJo	SINE/Alu	(179)	133	1	1533749
237	27.9	6.3	5.0	chr16	84882132	84882350	(5455995)	+	L1M2	LINE/L1	2270	2491	(3652)	1533750
338	32.5	1.2	1.9	chr16	84959469	84959610	(5378735)	+	MIR3	SINE/MIR	28	161	(47)	1533920
21	21.1	5.2	4.4	chr16	85027948	85028056	(5310289)	+	G-rich	Low_complexity	1	109	(0)	1534048
2263	13.8	5.1	2.2	chr16	85049407	85049821	(5288524)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1534088
50	0.0	0.0	0.0	chr16	85235429	85235471	(5102874)	+	(TG)n	Simple_repeat	1	43	(0)	1534454
50	33.5	1.8	1.3	chr16	85245870	85246089	(5092256)	+	(TG)n	Simple_repeat	1	224	(0)	1534483
65	27.8	2.6	0.5	chr16	85248348	85248541	(5089804)	+	(CT)n	Simple_repeat	1	199	(0)	1534487
263	28.3	11.7	2.8	chr16	85248912	85249129	(5089216)	+	MLT1K	LTR/ERVL-MaLR	312	551	(44)	1534488
441	29.6	1.8	1.2	chr16	85302589	85302752	(5035593)	C	MER5A	DNA/hAT-Charlie	(19)	170	6	1534589
2327	12.3	0.0	0.0	chr16	85327321	85327630	(5010715)	+	AluSz	SINE/Alu	1	310	(2)	1534643
971	21.4	8.2	4.3	chr16	85327631	85327704	(5010641)	C	MLT1G1	LTR/ERVL-MaLR	(505)	74	1	1534642
262	33.0	1.8	3.5	chr16	85327731	85327843	(5010502)	C	MIR3	SINE/MIR	(13)	195	85	1534644
219	20.0	0.0	0.0	chr16	85328079	85328118	(5010227)	+	L2b	LINE/L2	3322	3361	(14)	1534645
199	29.1	10.7	5.7	chr16	85380213	85380336	(4958009)	C	L2b	LINE/L2	(208)	3167	3037	1534744
1942	14.5	2.4	0.3	chr16	85402640	85402929	(4935416)	+	AluJb	SINE/Alu	1	296	(16)	1534782
1216	24.5	11.0	4.6	chr16	85402930	85403412	(4934933)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	1	1534781
13	18.2	0.0	0.0	chr16	85422348	85422378	(4915967)	+	G-rich	Low_complexity	1	31	(0)	1534803
13	8.5	4.0	0.0	chr16	85422488	85422512	(4915833)	+	(AGG)n	Simple_repeat	1	26	(0)	1534804
196	22.2	0.0	0.0	chr16	85422532	85422576	(4915769)	C	L2b	LINE/L2	(13)	3362	3318	1534805
15	5.6	0.0	0.0	chr16	85422579	85422597	(4915748)	+	(A)n	Simple_repeat	1	19	(0)	1534806
1250	14.0	3.7	0.5	chr16	85441132	85441339	(4897006)	C	MER20	DNA/hAT-Charlie	(2)	217	3	1534847
2239	11.2	2.6	0.0	chr16	85441373	85441675	(4896670)	+	AluSx	SINE/Alu	1	311	(1)	1534848
338	31.8	2.7	7.2	chr16	85527773	85527965	(4810380)	C	L2c	LINE/L2	(159)	3228	3045	1535008
467	32.5	5.8	5.8	chr16	85528114	85528312	(4810033)	C	L2a	LINE/L2	(45)	3381	3188	1535009
1368	18.2	4.2	5.2	chr16	85528313	85528625	(4809720)	C	AluJr	SINE/Alu	(0)	312	1	1535010
48	0.0	0.0	0.0	chr16	85528639	85528682	(4809663)	+	(TTTTG)n	Simple_repeat	1	44	(0)	1535011
467	32.5	5.8	5.8	chr16	85528683	85528777	(4809568)	C	L2a	LINE/L2	(252)	3174	3074	1535009
555	29.3	7.7	1.8	chr16	85528826	85529187	(4809158)	C	L2a	LINE/L2	(329)	3097	2643	1535009
23	28.5	1.2	1.2	chr16	85554777	85554858	(4783487)	+	G-rich	Low_complexity	1	83	(0)	1535053
18	8.8	2.5	4.9	chr16	85555105	85555144	(4783201)	+	(GCC)n	Simple_repeat	1	41	(0)	1535054
38	0.0	0.0	0.0	chr16	85567035	85567069	(4771276)	+	(CCCCCA)n	Simple_repeat	1	35	(0)	1535073
1244	27.2	4.5	4.2	chr16	85567278	85567723	(4770622)	C	MLT1G3	LTR/ERVL-MaLR	(45)	550	107	1535074
264	11.0	7.2	1.5	chr16	85572020	85572574	(4765771)	+	(AC)n	Simple_repeat	1	595	(0)	1535081
180	32.7	7.5	7.0	chr16	85601025	85601251	(4737094)	C	L2b	LINE/L2	(219)	3156	2929	1535129
19	19.3	3.8	0.0	chr16	85607061	85607113	(4731232)	+	G-rich	Low_complexity	1	55	(0)	1535137
247	22.1	3.4	0.2	chr16	85612823	85612886	(4725459)	C	L2a	LINE/L2	(21)	3405	3290	1535145
16	13.1	0.0	0.0	chr16	85987749	85987819	(4350526)	+	(C)n	Simple_repeat	1	71	(0)	1535808
1674	24.0	5.4	0.2	chr16	86043606	86044076	(4294269)	+	MLT1D	LTR/ERVL-MaLR	3	499	(6)	1535933
280	25.4	0.0	0.0	chr16	86044077	86044143	(4294202)	C	Charlie4a	DNA/hAT-Charlie	(64)	444	378	1535934
378	28.3	5.4	0.0	chr16	86044427	86044585	(4293760)	+	LTR16C	LTR/ERVL	312	479	(10)	1535935
1017	24.9	12.4	4.1	chr16	86044780	86045197	(4293148)	+	MLT1D	LTR/ERVL-MaLR	1	458	(47)	1535936
16	18.9	0.0	0.0	chr16	87053111	87053140	(3285205)	+	(C)n	Simple_repeat	1	30	(0)	1537716
16	17.2	0.0	0.0	chr16	87063048	87063080	(3275265)	+	(GTT)n	Simple_repeat	1	33	(0)	1537732
2147	12.6	0.7	0.0	chr16	87063121	87063422	(3274923)	C	AluJo	SINE/Alu	(8)	304	1	1537733
1673	12.5	3.7	6.2	chr16	87766142	87766446	(2571899)	+	AluJr	SINE/Alu	1	297	(15)	1539015
738	13.5	0.0	0.0	chr16	87766548	87766651	(2571694)	C	AluSz6	SINE/Alu	(5)	307	204	1539016
16	13.2	0.0	0.0	chr16	87854065	87854089	(2484256)	+	(C)n	Simple_repeat	1	25	(0)	1539174
13	28.1	0.0	0.0	chr16	88455515	88455557	(1882788)	+	(CGCC)n	Simple_repeat	1	43	(0)	1539982
20	29.4	0.0	10.0	chr16	88497392	88497561	(1840784)	+	G-rich	Low_complexity	1	170	(0)	1540031
30	14.2	4.7	4.4	chr16	88561979	88562064	(1776281)	+	(CCATCCC)n	Simple_repeat	1	90	(0)	1540124
14	9.5	8.8	0.0	chr16	88630742	88630779	(1707566)	+	(CCCA)n	Simple_repeat	1	41	(0)	1540243
712	23.5	5.7	15.3	chr16	88662009	88662434	(1675911)	+	L1MD1	LINE/L1	5991	6373	(260)	1540279
789	12.4	8.6	0.8	chr16	88662571	88662699	(1675646)	C	AluJb	SINE/Alu	(30)	282	143	1540286
245	26.7	10.4	0.0	chr16	88685189	88685274	(1653071)	C	MER112	DNA/hAT-Charlie	(123)	138	43	1540328
12	5.0	0.0	4.3	chr16	88685756	88685778	(1652567)	+	(AGGG)n	Simple_repeat	1	23	(0)	1540329
207	35.4	1.6	4.5	chr16	88782861	88782993	(1555352)	+	MER5B	DNA/hAT-Charlie	5	133	(45)	1540421
13	16.9	0.0	0.0	chr16	88785075	88785101	(1553244)	+	(CCT)n	Simple_repeat	1	27	(0)	1540423
15	21.8	0.0	5.7	chr16	88872266	88872318	(1466027)	+	G-rich	Low_complexity	1	53	(0)	1540538
140	18.5	2.6	3.6	chr16	88993555	88993906	(1344439)	+	(CCTTCCT)n	Simple_repeat	1	361	(0)	1540673
209	32.1	11.0	0.0	chr16	89003510	89003590	(1334755)	+	MIRb	SINE/MIR	86	176	(92)	1540686
13	15.6	5.6	0.0	chr16	89003673	89003708	(1334637)	+	(CCAGGCC)n	Simple_repeat	1	38	(0)	1540687
17	22.3	6.0	3.4	chr16	89003942	89004024	(1334321)	+	GA-rich	Low_complexity	1	88	(0)	1540688
1792	13.0	0.4	1.9	chr16	89005026	89005287	(1333058)	C	AluSz6	SINE/Alu	(10)	302	45	1540689
324	29.7	4.1	3.3	chr16	89218387	89218508	(1119837)	C	L1MC4	LINE/L1	(158)	7884	7762	1540932
2049	9.9	0.0	3.8	chr16	89240660	89240833	(1097512)	+	AluSz	SINE/Alu	117	281	(31)	1540965
449	34.6	8.4	7.2	chr16	89240834	89240911	(1097434)	+	L1MEf	LINE/L1	5357	5425	(1119)	1540956
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
1115	19.1	0.0	3.3	chr16	89241689	89241898	(1096447)	C	AluJr	SINE/Alu	(0)	312	110	1540968
289	30.5	2.3	9.1	chr16	89330369	89330599	(1007746)	C	MLT1F	LTR/ERVL-MaLR	(198)	350	136	1541087
531	29.4	6.1	4.2	chr16	89330604	89330844	(1007501)	C	MLT1F1	LTR/ERVL-MaLR	(314)	255	10	1541088
239	21.1	0.0	6.6	chr16	89330865	89330925	(1007420)	+	L1MC5a	LINE/L1	1009	1065	(1712)	1541089
2304	10.2	0.0	0.0	chr16	89330960	89331253	(1007092)	C	AluSx1	SINE/Alu	(18)	294	1	1541090
25	23.9	1.7	0.0	chr16	89489211	89489268	(849077)	+	(AC)n	Simple_repeat	1	59	(0)	1541346
11	16.9	2.9	2.8	chr16	89489367	89489401	(848944)	+	(CCGCCA)n	Simple_repeat	1	36	(0)	1541347
1420	10.3	19.0	0.0	chr16	89564428	89564661	(773684)	+	AluSx	SINE/Alu	1	289	(23)	1541484
182	34.6	5.5	1.9	chr16	89565010	89565115	(773230)	+	LFSINE_Vert	SINE/tRNA	309	418	(41)	1541485
362	32.4	2.8	2.8	chr16	89602098	89602275	(736070)	+	MLT1F1	LTR/ERVL-MaLR	392	569	(0)	1541524
13	23.5	1.8	5.4	chr16	89972927	89972981	(365364)	+	(CCT)n	Simple_repeat	1	56	(0)	1542179
16	20.2	2.1	2.1	chr16	90019460	90019506	(318839)	+	G-rich	Low_complexity	1	48	(0)	1542241
545	30.7	7.7	3.1	chr17	751145	751366	(82506075)	C	MIRb	SINE/MIR	(16)	252	20	1545735
213	27.2	3.2	12.4	chr17	751680	751784	(82505657)	C	MIR	SINE/MIR	(89)	173	79	1545736
12	7.4	0.0	11.1	chr17	1399740	1399775	(81857666)	+	(CCTCCC)n	Simple_repeat	1	36	(0)	1547030
33	0.0	0.0	0.0	chr17	1400607	1400637	(81856804)	+	(TTTTCTT)n	Simple_repeat	1	31	(0)	1547031
2107	8.5	1.4	0.7	chr17	1400638	1400918	(81856523)	C	AluSq	SINE/Alu	(30)	283	1	1547032
2250	10.7	0.0	0.0	chr17	1400999	1401289	(81856152)	+	AluSx3	SINE/Alu	1	291	(20)	1547033
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
2336	9.9	0.0	0.3	chr17	1490216	1490527	(81766914)	+	AluSc8	SINE/Alu	1	311	(0)	1547241
227	26.6	18.6	0.0	chr17	1490874	1491016	(81766425)	+	L2c	LINE/L2	3028	3198	(177)	1547242
12	19.3	4.7	2.2	chr17	1649911	1649953	(81607488)	+	G-rich	Low_complexity	1	45	(0)	1547529
13	29.8	0.0	0.0	chr17	2392861	2392905	(80864536)	+	G-rich	Low_complexity	1	45	(0)	1549013
19	21.7	1.4	5.6	chr17	2398959	2399029	(80858412)	+	(GCCCCC)n	Simple_repeat	1	72	(0)	1549020
12	14.1	3.0	2.9	chr17	3037587	3037619	(80219822)	+	(ATGTA)n	Simple_repeat	1	34	(0)	1550474
12	25.7	4.0	5.1	chr17	3892274	3892349	(79365092)	+	(GCACAC)n	Simple_repeat	1	79	(0)	1551949
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
2354	9.6	0.3	0.0	chr17	4002906	4003208	(79254233)	C	AluSp	SINE/Alu	(9)	304	1	1552176
199	26.8	4.0	2.7	chr17	4144300	4144372	(79113069)	C	L2b	LINE/L2	(35)	3340	3267	1552425
2166	6.8	0.7	1.1	chr17	4795661	4795938	(78461503)	C	AluSg	SINE/Alu	(0)	310	34	1553804
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
18	19.4	0.0	0.0	chr17	4948969	4949009	(78308432)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	1554113
215	37.1	8.9	3.5	chr17	6456642	6457043	(76800398)	+	L2c	LINE/L2	2368	2793	(626)	1557128
482	36.3	9.3	2.3	chr17	6457043	6457479	(76799962)	+	L2c	LINE/L2	2917	3387	(0)	1557128
4091	25.1	5.2	3.7	chr17	6913648	6915975	(76341466)	+	L1PBb	LINE/L1	3	1644	(5219)	1557892
13	15.9	2.6	5.0	chr17	7014818	7014856	(76242585)	+	(GCG)n	Simple_repeat	1	40	(0)	1558088
17	26.0	4.1	1.9	chr17	7014959	7015034	(76242407)	+	G-rich	Low_complexity	1	77	(0)	1558089
14	26.8	3.7	0.0	chr17	7020145	7020198	(76237243)	+	G-rich	Low_complexity	1	56	(0)	1558092
13	17.0	3.0	0.0	chr17	7217447	7217479	(76039962)	+	G-rich	Low_complexity	1	34	(0)	1558468
20	17.1	1.9	3.8	chr17	7217607	7217658	(76039783)	+	GA-rich	Low_complexity	1	53	(0)	1558469
16	16.5	0.0	0.0	chr17	7238276	7238302	(76019139)	+	(C)n	Simple_repeat	1	27	(0)	1558481
16	16.8	0.0	0.0	chr17	7238639	7238665	(76018776)	+	(C)n	Simple_repeat	1	27	(0)	1558482
13	18.3	4.3	4.1	chr17	7242376	7242422	(76015019)	+	(GGC)n	Simple_repeat	1	49	(0)	1558486
13	6.0	10.8	2.4	chr17	7308014	7308050	(75949391)	+	G-rich	Low_complexity	1	41	(0)	1558610
23	21.9	1.9	7.5	chr17	7404780	7404883	(75852558)	+	(GGCG)n	Simple_repeat	1	106	(0)	1558788
13	23.3	3.9	1.9	chr17	7479350	7479401	(75778040)	+	G-rich	Low_complexity	1	54	(0)	1558907
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
11	22.0	2.2	4.3	chr17	7573782	7573827	(75683614)	+	(GCGAGG)n	Simple_repeat	1	47	(0)	1559097
16	18.6	6.1	0.0	chr17	7614616	7614664	(75642777)	+	(CCGGAG)n	Simple_repeat	1	52	(0)	1559152
41	33.8	1.1	2.1	chr17	7614701	7614891	(75642550)	+	(GCC)n	Simple_repeat	1	193	(0)	1559153
24	23.4	0.0	0.0	chr17	7834033	7834092	(75423349)	+	(ACCCCGC)n	Simple_repeat	1	60	(0)	1559618
35	13.9	2.3	5.6	chr17	7838273	7838360	(75419081)	+	GA-rich	Low_complexity	1	90	(0)	1559622
18	4.5	0.0	0.0	chr17	7838448	7838470	(75418971)	+	(CA)n	Simple_repeat	1	23	(0)	1559623
22	0.0	0.0	0.0	chr17	7884072	7884095	(75373346)	+	(AC)n	Simple_repeat	1	24	(0)	1559695
44	4.5	0.0	0.0	chr17	7884447	7884493	(75372948)	+	(TA)n	Simple_repeat	1	47	(0)	1559696
44	0.0	0.0	0.0	chr17	7884696	7884735	(75372706)	+	(GAG)n	Simple_repeat	1	40	(0)	1559697
13	24.4	4.2	0.0	chr17	7884747	7884794	(75372647)	+	(GCGG)n	Simple_repeat	1	50	(0)	1559698
63	21.0	0.0	0.0	chr17	7884824	7884954	(75372487)	+	GA-rich	Low_complexity	1	131	(0)	1559699
42	7.5	0.0	0.0	chr17	7885026	7885081	(75372360)	+	(CCG)n	Simple_repeat	1	56	(0)	1559700
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
226	27.4	0.0	0.0	chr17	8221309	8221359	(75036082)	+	MIRc	SINE/MIR	103	153	(115)	1560358
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
502	32.1	8.3	10.0	chr17	8386911	8387329	(74870112)	C	L2b	LINE/L2	(0)	3375	2965	1560708
2364	10.0	0.0	0.0	chr17	8387411	8387700	(74869741)	C	AluSg	SINE/Alu	(18)	292	3	1560709
1937	19.1	4.8	1.2	chr17	13512683	13513101	(69744340)	+	Zaphod	DNA/hAT-Tip100	3595	4029	(2)	1569895
475	31.6	8.3	0.9	chr17	13513436	13513770	(69743671)	C	L1ME4a	LINE/L1	(30)	6094	5733	1569896
15	22.1	0.0	5.7	chr17	16381261	16381313	(66876128)	+	G-rich	Low_complexity	1	53	(0)	1574858
16	9.8	0.0	0.0	chr17	17305392	17305413	(65952028)	+	(C)n	Simple_repeat	1	22	(0)	1576404
17	30.7	1.3	2.5	chr17	17591331	17591409	(65666032)	+	(ACACGC)n	Simple_repeat	1	80	(0)	1576913
11	21.8	0.0	4.9	chr17	17591984	17592024	(65665417)	+	G-rich	Low_complexity	1	41	(0)	1576914
17	17.5	2.6	0.0	chr17	17681398	17681436	(65576005)	+	(CCGC)n	Simple_repeat	1	40	(0)	1577150
2349	8.4	0.3	2.9	chr17	17825600	17825910	(65431531)	C	AluSx	SINE/Alu	(4)	308	6	1577413
412	32.2	8.6	4.0	chr17	17919036	17919258	(65338183)	+	MIRb	SINE/MIR	4	237	(31)	1577572
2455	8.1	0.0	0.7	chr17	18244235	18244542	(65012899)	C	AluY	SINE/Alu	(5)	306	1	1578216
18	12.0	0.0	0.0	chr17	18244720	18244746	(65012695)	+	(G)n	Simple_repeat	1	27	(0)	1578217
23	25.0	0.0	1.5	chr17	18247108	18247175	(65010266)	+	(CCCCGC)n	Simple_repeat	1	68	(0)	1578218
470	22.7	0.9	0.9	chr17	20908916	20909026	(62348415)	+	MER125	DNA	4	114	(62)	1583315
15	5.5	0.0	0.0	chr17	21043297	21043315	(62214126)	+	(C)n	Simple_repeat	1	19	(0)	1583517
428	23.8	1.7	11.3	chr17	21253725	21253918	(62003523)	C	MIRb	SINE/MIR	(8)	260	86	1583927
266	29.2	0.0	0.0	chr17	27333409	27333504	(55923937)	C	L1ME3G	LINE/L1	(811)	113	18	1586541
2081	14.0	0.3	1.0	chr17	27333631	27333944	(55923497)	C	AluJo	SINE/Alu	(0)	312	1	1586542
1299	12.5	0.0	2.1	chr17	27355962	27356153	(55901288)	C	AluSx1	SINE/Alu	(5)	307	120	1586608
655	13.2	0.0	0.0	chr17	27356286	27356376	(55901065)	C	AluJr	SINE/Alu	(194)	118	28	1586609
558	28.9	6.8	0.8	chr17	27356377	27356610	(55900831)	+	L2a	LINE/L2	2991	3239	(187)	1586610
268	26.3	0.0	2.6	chr17	27356619	27356696	(55900745)	+	MER102c	DNA/hAT-Charlie	236	311	(20)	1586611
2345	11.4	0.7	0.0	chr17	27356707	27357014	(55900427)	C	AluSx1	SINE/Alu	(2)	310	1	1586612
289	25.4	15.0	0.9	chr17	27380834	27380956	(55876485)	C	L2b	LINE/L2	(2)	3424	3247	1586665
1724	17.5	1.0	1.7	chr17	27381570	27381866	(55875575)	+	AluJb	SINE/Alu	2	296	(16)	1586666
359	26.5	1.2	0.0	chr17	27564652	27564734	(55692707)	C	MLT1K	LTR/ERVL-MaLR	(326)	269	186	1587051
16	13.1	0.0	0.0	chr17	27564737	27564761	(55692680)	+	(C)n	Simple_repeat	1	25	(0)	1587052
304	22.9	4.0	8.6	chr17	27576880	27576984	(55680457)	+	MIRb	SINE/MIR	60	159	(109)	1587072
16	5.2	0.0	0.0	chr17	27577041	27577060	(55680381)	+	(T)n	Simple_repeat	1	20	(0)	1587073
512	27.8	4.9	0.6	chr17	27654920	27655093	(55602348)	C	MIR	SINE/MIR	(70)	192	11	1587207
274	35.8	4.3	3.2	chr17	27984391	27984575	(55272866)	C	MIRc	SINE/MIR	(63)	205	19	1587840
19	11.6	0.0	0.0	chr17	27984618	27984645	(55272796)	+	(C)n	Simple_repeat	1	28	(0)	1587841
71	0.0	1.5	0.0	chr17	28092748	28092814	(55164627)	+	(TTTTA)n	Simple_repeat	1	68	(0)	1588069
2142	10.1	1.4	0.0	chr17	28092816	28093092	(55164349)	C	AluSc	SINE/Alu	(28)	281	1	1588070
14	29.9	0.0	6.1	chr17	28645063	28645144	(54612297)	+	(CCCGG)n	Simple_repeat	1	82	(0)	1589065
16	20.6	0.0	2.4	chr17	28662211	28662251	(54595190)	+	(GCG)n	Simple_repeat	1	41	(0)	1589101
266	31.5	7.5	10.1	chr17	28706812	28707158	(54550283)	C	L2b	LINE/L2	(3)	3384	3064	1589174
13	33.8	2.4	2.4	chr17	28727120	28727201	(54530240)	+	G-rich	Low_complexity	1	84	(0)	1589204
2504	8.7	0.0	0.0	chr17	28742791	28743102	(54514339)	+	AluSx1	SINE/Alu	1	312	(0)	1589231
23	3.7	0.0	0.0	chr17	28813023	28813050	(54444391)	+	(G)n	Simple_repeat	1	28	(0)	1589378
20	18.6	0.0	0.0	chr17	28813128	28813164	(54444277)	+	A-rich	Low_complexity	1	37	(0)	1589379
734	22.2	2.4	3.6	chr17	28901752	28901919	(54355522)	+	MIR	SINE/MIR	45	210	(52)	1589590
477	30.9	10.0	3.1	chr17	28901943	28902451	(54354990)	+	L2b	LINE/L2	2661	3214	(161)	1589591
442	32.1	4.5	1.3	chr17	28912173	28912328	(54345113)	+	MIR3	SINE/MIR	3	163	(105)	1589602
15	20.4	0.0	0.0	chr17	28951010	28951038	(54306403)	+	G-rich	Low_complexity	1	29	(0)	1589655
13	23.9	0.0	2.4	chr17	28951407	28951447	(54305994)	+	(CCG)n	Simple_repeat	1	41	(0)	1589656
20	7.8	0.0	0.0	chr17	29116722	29116748	(54140693)	+	(C)n	Simple_repeat	1	27	(0)	1589925
13	22.8	3.6	3.5	chr17	29293104	29293158	(53964283)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	1590286
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
20	20.7	0.0	0.0	chr17	29390817	29390855	(53866586)	+	(C)n	Simple_repeat	1	39	(0)	1590556
15	11.6	0.0	3.3	chr17	29390924	29390953	(53866488)	+	(CCT)n	Simple_repeat	1	30	(0)	1590557
18	23.6	2.2	6.5	chr17	29930050	29930066	(53327375)	+	G-rich	Low_complexity	1	87	(0)	1591635
17	26.2	4.4	0.0	chr17	29930067	29930134	(53327307)	+	(GGAGCGG)n	Simple_repeat	1	71	(0)	1591636
527	25.0	11.1	0.0	chr17	30698191	30698366	(52559075)	C	L2a	LINE/L2	(1)	3425	3228	1593067
345	7.3	0.0	0.0	chr17	30698367	30698407	(52559034)	+	FLAM_A	SINE/Alu	70	110	(32)	1593068
235	22.0	0.0	0.0	chr17	30698368	30698417	(52559024)	C	SVA_E	Retroposon/SVA	(1123)	259	210	1593069
1404	11.1	0.0	0.0	chr17	30698488	30698668	(52558773)	C	AluSz6	SINE/Alu	(10)	302	122	1593070
2646	5.5	0.0	0.0	chr17	30698675	30698985	(52558456)	C	AluY	SINE/Alu	(0)	311	1	1593071
18	22.9	6.1	0.0	chr17	30709071	30709136	(52548305)	+	(GCCCC)n	Simple_repeat	1	70	(0)	1593097
23	18.9	3.5	5.6	chr17	31095059	31095145	(52162296)	+	(CCCCCT)n	Simple_repeat	1	90	(0)	1593994
21	6.7	0.0	0.0	chr17	31095479	31095510	(52161931)	+	(GGAAG)n	Simple_repeat	1	32	(0)	1593995
12	30.2	7.3	0.0	chr17	31095511	31095557	(52161884)	+	GA-rich	Low_complexity	4	88	(0)	1593996
4091	9.2	3.8	10.5	chr17	31516762	31517345	(51740096)	C	MER51A	LTR/ERV1	(96)	538	1	1594739
21	24.8	0.0	1.7	chr17	31937083	31937140	(51320301)	+	(CCTTC)n	Simple_repeat	1	58	(0)	1595692
16	16.3	2.3	2.3	chr17	33641941	33641983	(49615458)	+	(ATTTTTT)n	Simple_repeat	1	44	(0)	1599056
214	17.5	4.2	2.0	chr17	33642467	33642533	(49614908)	+	L2a	LINE/L2	3306	3426	(0)	1599057
234	19.0	5.0	1.9	chr17	33889179	33889239	(49368202)	C	Plat_L3	LINE/CR1	(13)	3573	3520	1599503
302	21.4	0.0	0.0	chr17	33889241	33889296	(49368145)	C	MIR3	SINE/MIR	(67)	141	86	1599504
13	5.3	0.0	0.0	chr17	34039880	34039899	(49217542)	+	(GCC)n	Simple_repeat	1	20	(0)	1599772
14	23.7	3.4	3.3	chr17	34040107	34040165	(49217276)	+	(CCCGGC)n	Simple_repeat	1	61	(0)	1599773
13	41.8	0.0	0.0	chr17	34040391	34040472	(49216969)	+	G-rich	Low_complexity	1	82	(0)	1599774
1409	10.0	1.2	0.0	chr17	35555397	35555566	(47701875)	+	AluSx	SINE/Alu	126	297	(15)	1602383
1935	17.3	0.0	0.0	chr17	35556027	35556309	(47701132)	C	AluSx	SINE/Alu	(1)	311	29	1602384
16	5.3	0.0	0.0	chr17	35588067	35588086	(47669355)	+	(T)n	Simple_repeat	1	20	(0)	1602449
912	11.5	2.3	0.0	chr17	35588312	35588441	(47669000)	C	AluJo	SINE/Alu	(179)	133	1	1602450
820	20.0	1.2	1.2	chr17	36072278	36072449	(47184992)	C	MER5B	DNA/hAT-Charlie	(6)	172	1	1603353
260	33.5	7.2	1.2	chr17	36072450	36072600	(47184841)	C	MLT1K-int	LTR/ERVL-MaLR	(596)	791	630	1603354
2335	15.5	4.4	15.2	chr17	36072804	36073389	(47184052)	+	MLT2B1	LTR/ERVL	1	520	(0)	1603355
29	14.9	0.0	7.7	chr17	36545398	36545475	(46711966)	+	(GGCG)n	Simple_repeat	1	78	(0)	1604134
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
1066	14.4	13.9	9.2	chr17	36603248	36603414	(46654027)	C	MER33	DNA/hAT-Charlie	(0)	324	160	1604238
12	20.7	4.3	2.1	chr17	36722506	36722551	(46534890)	+	G-rich	Low_complexity	1	48	(0)	1604499
17	7.3	3.5	0.0	chr17	36727915	36727943	(46529498)	+	(TCC)n	Simple_repeat	1	30	(0)	1604508
17	18.5	2.3	0.0	chr17	38428325	38428367	(44829074)	+	G-rich	Low_complexity	1	44	(0)	1607838
36	19.3	3.9	5.2	chr17	38705133	38705262	(44552179)	+	(GGCG)n	Simple_repeat	1	135	(0)	1608410
40	19.0	1.0	3.9	chr17	38705440	38705542	(44551899)	+	GA-rich	Low_complexity	1	104	(0)	1608411
24	2.6	2.2	6.5	chr17	38748222	38748266	(44509175)	+	(GGGA)n	Simple_repeat	1	46	(0)	1608484
25	11.7	1.6	6.2	chr17	38748347	38748409	(44509032)	+	G-rich	Low_complexity	1	64	(0)	1608485
18	23.2	4.7	3.0	chr17	38751324	38751387	(44506054)	+	(TC)n	Simple_repeat	1	67	(0)	1608487
23	14.5	0.0	0.0	chr17	38751735	38751772	(44505669)	+	(A)n	Simple_repeat	1	38	(0)	1608488
698	1.3	0.0	0.0	chr17	38751778	38751854	(44505587)	C	tRNA-Asn-AAC	tRNA	(0)	77	1	1608489
797	15.6	18.1	0.0	chr17	38764867	38765020	(44492421)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	1608521
15	13.7	0.0	0.0	chr17	38765127	38765150	(44492291)	+	(G)n	Simple_repeat	1	24	(0)	1608522
1750	16.6	6.0	0.0	chr17	38765216	38765498	(44491943)	C	AluJb	SINE/Alu	(11)	301	1	1608523
1872	11.8	7.4	0.0	chr17	38825947	38826235	(44431206)	C	AluSq	SINE/Alu	(0)	313	2	1608651
2074	8.0	6.0	1.8	chr17	38866814	38867099	(44390342)	+	AluSx1	SINE/Alu	5	303	(9)	1608773
2069	7.8	0.0	8.7	chr17	38867173	38867494	(44389947)	C	AluSx3	SINE/Alu	(17)	294	1	1608774
641	2.7	0.0	0.0	chr17	38867645	38867717	(44389724)	+	tRNA-Cys-TGY	tRNA	1	73	(2)	1608775
17	20.3	0.0	5.4	chr17	38869952	38870007	(44387434)	+	(CGTGCC)n	Simple_repeat	1	56	(0)	1608780
4351	12.1	1.4	4.1	chr17	39014173	39014879	(44242562)	+	LTR8	LTR/ERV1	1	688	(3)	1609127
838	9.1	11.2	1.4	chr17	39014880	39014984	(44242457)	+	MER21A	LTR/ERVL	42	161	(770)	1609126
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
12	19.9	5.0	0.0	chr17	39198329	39198368	(44059073)	+	(GATGAGA)n	Simple_repeat	1	42	(0)	1609529
15	18.3	0.0	2.6	chr17	39461980	39462018	(43795423)	+	G-rich	Low_complexity	1	39	(0)	1610149
16	23.3	0.0	0.0	chr17	39663624	39663658	(43593783)	+	(C)n	Simple_repeat	1	35	(0)	1610548
1893	9.4	3.0	0.4	chr17	39753443	39753698	(43503743)	C	AluSz	SINE/Alu	(11)	301	39	1610714
15	10.7	4.3	6.2	chr17	40062829	40062874	(43194567)	+	(AGCCCG)n	Simple_repeat	1	48	(0)	1611288
11	18.1	2.4	4.8	chr17	40063411	40063451	(43193990)	+	(CCCGCCG)n	Simple_repeat	1	42	(0)	1611289
12	25.7	2.1	2.0	chr17	40063469	40063516	(43193925)	+	(CCCGAGC)n	Simple_repeat	1	49	(0)	1611290
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
14	12.4	5.7	0.0	chr17	40072900	40072934	(43184507)	+	(CCCCAGT)n	Simple_repeat	1	37	(0)	1611302
374	27.8	3.8	1.9	chr17	40073322	40073448	(43183993)	+	MIR	SINE/MIR	24	147	(83)	1611303
2193	8.3	0.0	0.7	chr17	40108683	40108959	(43148482)	+	AluSx1	SINE/Alu	24	298	(14)	1611362
20	26.4	5.1	1.9	chr17	40122194	40122291	(43135150)	+	G-rich	Low_complexity	1	103	(0)	1611392
15	12.6	9.3	0.0	chr17	40122347	40122389	(43135052)	+	(GAGGCG)n	Simple_repeat	1	47	(0)	1611393
13	9.1	8.1	2.5	chr17	40341938	40341977	(42915464)	+	(TTCCTCC)n	Simple_repeat	1	42	(0)	1611855
19	30.7	2.2	2.1	chr17	40342076	40342166	(42915275)	+	G-rich	Low_complexity	1	93	(0)	1611856
232	30.5	0.0	0.0	chr17	40437058	40437116	(42820325)	+	MIRc	SINE/MIR	59	117	(151)	1612043
402	30.7	6.9	0.3	chr17	40437298	40437456	(42819985)	C	MIR3	SINE/MIR	(3)	205	51	1612044
17	0.0	0.0	0.0	chr17	40443293	40443313	(42814128)	+	(GCG)n	Simple_repeat	1	21	(0)	1612057
18	21.5	0.0	5.1	chr17	40443327	40443385	(42814056)	+	(CCCCCT)n	Simple_repeat	1	59	(0)	1612058
12	15.8	2.6	5.0	chr17	40443451	40443489	(42813952)	+	(GCCCCTC)n	Simple_repeat	1	40	(0)	1612059
28	10.8	9.4	3.2	chr17	40443634	40443718	(42813723)	+	(GCGCCCGC)n	Simple_repeat	1	93	(0)	1612060
19	3.4	3.3	0.0	chr17	40476227	40476256	(42781185)	+	(GGGTGG)n	Simple_repeat	1	31	(0)	1612126
70	0.0	0.0	0.0	chr17	40476370	40476429	(42781012)	+	(GT)n	Simple_repeat	1	60	(0)	1612127
2142	11.7	1.3	0.0	chr17	40476584	40476881	(42780560)	+	AluSx	SINE/Alu	2	303	(9)	1612128
1177	10.7	0.0	0.0	chr17	40535771	40535920	(42721521)	C	AluSc8	SINE/Alu	(14)	297	148	1612265
769	26.0	5.7	0.5	chr17	40535931	40536131	(42721310)	C	MLT1J1	LTR/ERVL-MaLR	(169)	275	64	1612264
230	31.4	13.6	0.8	chr17	40647072	40647193	(42610248)	+	L2a	LINE/L2	3283	3422	(4)	1612425
565	29.5	6.8	1.5	chr17	40647209	40647404	(42610037)	C	MIRb	SINE/MIR	(55)	213	7	1612426
2342	7.4	1.7	0.0	chr17	41528711	41529006	(41728435)	C	AluSz	SINE/Alu	(11)	301	1	1613756
25	12.9	0.0	0.0	chr17	41665480	41665522	(41591919)	+	(ACAC)n	Simple_repeat	1	43	(0)	1613988
260	34.5	4.5	8.9	chr17	41667243	41667567	(41589874)	C	L2b	LINE/L2	(42)	3333	3024	1613991
12	7.5	6.7	3.1	chr17	41786139	41786168	(41471273)	+	G-rich	Low_complexity	1	32	(0)	1614291
13	0.0	0.0	8.0	chr17	42050479	42050503	(41206938)	+	(CCGC)n	Simple_repeat	1	25	(0)	1614843
13	15.5	0.0	3.2	chr17	42072122	42072152	(41185289)	+	(CTTCC)n	Simple_repeat	1	31	(0)	1614883
11	20.6	5.1	0.0	chr17	42120926	42120964	(41136477)	+	(GCCCCAG)n	Simple_repeat	1	41	(0)	1614976
43	22.4	1.3	5.8	chr17	42121140	42121291	(41136150)	+	(GGCTGG)n	Simple_repeat	1	154	(0)	1614977
2337	11.0	0.0	0.0	chr17	42319260	42319568	(40937873)	+	AluSz	SINE/Alu	1	309	(3)	1615360
2928	11.8	2.4	0.2	chr17	42535068	42535524	(40721917)	C	MER41B	LTR/ERV1	(167)	467	1	1615833
434	30.2	8.0	4.7	chr17	42535586	42536003	(40721438)	+	L2c	LINE/L2	2938	3387	(0)	1615843
283	33.1	7.1	4.6	chr17	42678626	42678885	(40578556)	C	Plat_L3	LINE/CR1	(118)	3468	3202	1616135
393	26.7	4.8	11.3	chr17	42678934	42679136	(40578305)	C	L3	LINE/CR1	(25)	4074	3886	1616136
19	4.5	0.0	0.0	chr17	43021607	43021629	(40235812)	+	(G)n	Simple_repeat	1	23	(0)	1616897
1373	11.3	2.7	21.1	chr17	43023769	43024138	(40233303)	C	AluJr	SINE/Alu	(11)	301	2	1616903
1734	6.0	15.4	1.2	chr17	43024210	43024460	(40232981)	C	AluY	SINE/Alu	(18)	293	1	1616904
15	34.5	0.0	0.0	chr17	43025143	43025204	(40232237)	+	G-rich	Low_complexity	1	62	(0)	1616905
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
12	22.4	3.5	5.1	chr17	44200421	44200477	(39056964)	+	(CTCCC)n	Simple_repeat	1	59	(0)	1619434
39	24.9	1.0	0.0	chr17	44219550	44219649	(39037792)	+	(GCG)n	Simple_repeat	1	101	(0)	1619463
21	15.4	3.1	6.0	chr17	44219706	44219770	(39037671)	+	(CCG)n	Simple_repeat	1	67	(0)	1619464
20	20.1	0.0	5.2	chr17	44219770	44219827	(39037614)	+	GA-rich	Low_complexity	1	58	(0)	1619465
14	21.1	0.0	6.1	chr17	44219884	44219932	(39037509)	+	(CGCC)n	Simple_repeat	1	49	(0)	1619466
16	20.5	4.5	4.3	chr17	44221524	44221590	(39035851)	+	(CCTCCTG)n	Simple_repeat	1	70	(0)	1619468
339	23.8	16.2	2.1	chr17	44266426	44266611	(38990830)	+	MIRb	SINE/MIR	7	219	(49)	1619566
438	29.7	5.0	11.4	chr17	44266940	44267175	(38990266)	C	MIR	SINE/MIR	(44)	224	5	1619567
1136	21.8	4.8	1.2	chr17	44267206	44267447	(38989994)	+	MIR	SINE/MIR	12	262	(0)	1619568
1420	15.9	15.3	0.4	chr17	44288102	44288352	(38969089)	C	AluJb	SINE/Alu	(16)	296	2	1619616
208	24.7	6.1	3.8	chr17	44288574	44288653	(38968788)	+	L2b	LINE/L2	2482	2563	(856)	1619617
214	17.4	0.0	10.6	chr17	44288816	44288869	(38968572)	+	L2b	LINE/L2	3315	3363	(24)	1619617
2183	9.7	1.7	0.0	chr17	44288870	44289159	(38968282)	C	AluSq2	SINE/Alu	(18)	295	1	1619618
214	8.1	0.0	11.9	chr17	44289160	44289177	(38968264)	+	L2b	LINE/L2	3352	3368	(7)	1619617
1326	10.2	4.7	11.2	chr17	44289282	44289396	(38968045)	C	MER44A	DNA/TcMar-Tigger	(0)	339	250	1619619
17	10.8	0.0	0.0	chr17	44308345	44308374	(38949067)	+	(CGAGG)n	Simple_repeat	1	30	(0)	1619670
14	17.3	5.1	0.0	chr17	44324412	44324450	(38932991)	+	(GCCCG)n	Simple_repeat	1	41	(0)	1619696
24	9.9	5.0	4.8	chr17	44326805	44326864	(38930577)	+	G-rich	Low_complexity	1	63	(0)	1619701
2068	10.7	0.0	0.0	chr17	44327229	44327500	(38929941)	+	AluSx	SINE/Alu	14	285	(27)	1619702
11	21.7	0.0	4.9	chr17	44363084	44363124	(38894317)	+	(CCCTCC)n	Simple_repeat	1	41	(0)	1619783
13	18.9	0.0	0.0	chr17	44363653	44363682	(38893759)	+	(AGC)n	Simple_repeat	1	30	(0)	1619784
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
9357	8.4	13.6	5.1	chr17	44568044	44569479	(38687962)	+	LTR12C	LTR/ERV1	3	1579	(0)	1620224
2889	12.4	6.6	5.6	chr17	44569480	44569542	(38687899)	C	L1MC1	LINE/L1	(490)	5843	5773	1620221
1955	19.3	5.8	8.8	chr17	44569547	44570024	(38687417)	C	MER70A	LTR/ERVL	(4)	468	6	1620225
2134	12.7	0.7	1.3	chr17	44893784	44894090	(38363351)	+	AluSz	SINE/Alu	1	305	(7)	1620938
1765	18.1	3.0	0.7	chr17	44894094	44894385	(38363056)	+	AluJb	SINE/Alu	1	299	(13)	1620939
324	37.9	11.1	2.7	chr17	45146347	45146715	(38110726)	+	L2c	LINE/L2	2983	3386	(1)	1621432
566	27.7	7.4	3.0	chr17	45146783	45147013	(38110428)	+	MIRc	SINE/MIR	22	263	(5)	1621433
18	8.7	0.0	0.0	chr17	45149095	45149119	(38108322)	+	(T)n	Simple_repeat	1	25	(0)	1621436
20	10.0	0.0	0.0	chr17	45172715	45172747	(38084694)	+	(GGGGA)n	Simple_repeat	1	33	(0)	1621483
15	23.3	0.0	0.0	chr17	45228978	45229017	(38028424)	+	GA-rich	Low_complexity	1	40	(0)	1621646
405	26.0	11.8	2.6	chr17	45648536	45648689	(37608752)	+	MIRc	SINE/MIR	24	193	(75)	1622511
16	9.6	0.0	0.0	chr17	45786118	45786140	(37471301)	+	(T)n	Simple_repeat	1	23	(0)	1622788
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
1260	14.6	13.5	4.6	chr17	46195571	46195831	(37061610)	C	AluJb	SINE/Alu	(18)	294	7	1623549
14	10.5	6.5	0.0	chr17	46195915	46195945	(37061496)	+	(ACAA)n	Simple_repeat	1	33	(0)	1623550
21	19.0	1.1	9.5	chr17	46225114	46225207	(37032234)	+	(CCCCGCG)n	Simple_repeat	1	95	(0)	1623616
23	13.3	0.0	0.0	chr17	46225507	46225547	(37031894)	+	(GTCTCT)n	Simple_repeat	1	41	(0)	1623617
18	21.5	2.3	0.0	chr17	46225789	46225831	(37031610)	+	(TA)n	Simple_repeat	1	44	(0)	1623618
29	0.0	0.0	0.0	chr17	46771761	46771788	(36485653)	+	(CCGCG)n	Simple_repeat	1	28	(0)	1624684
27	3.5	0.0	0.0	chr17	46771879	46771908	(36485533)	+	(CCCGCC)n	Simple_repeat	1	30	(0)	1624685
21	14.8	5.6	1.8	chr17	46771927	46771980	(36485461)	+	(CCG)n	Simple_repeat	1	57	(0)	1624686
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
23	12.0	2.1	2.1	chr17	47650536	47650582	(35606859)	+	(CCTCCC)n	Simple_repeat	1	48	(0)	1626491
29	24.0	4.0	1.9	chr17	47693965	47694101	(35563340)	+	GA-rich	Low_complexity	1	139	(0)	1626574
15	21.9	0.0	2.3	chr17	47694205	47694248	(35563193)	+	(GGCTGG)n	Simple_repeat	1	44	(0)	1626575
275	31.8	0.7	5.4	chr17	47732875	47733015	(35524426)	C	L2c	LINE/L2	(199)	3188	3055	1626624
18	25.9	1.8	0.0	chr17	47733143	47733198	(35524243)	+	G-rich	Low_complexity	1	57	(0)	1626625
12	25.9	0.0	2.3	chr17	47733335	47733377	(35524064)	+	(CCCGCCC)n	Simple_repeat	1	43	(0)	1626626
2431	9.6	0.3	0.3	chr17	47842657	47842969	(35414472)	+	AluSp	SINE/Alu	1	313	(0)	1626821
12	8.1	3.6	3.5	chr17	47877881	47877908	(35379533)	+	(CTCC)n	Simple_repeat	1	29	(0)	1626876
14	12.7	0.0	0.0	chr17	48153511	48153536	(35103905)	+	(CAT)n	Simple_repeat	1	26	(0)	1627390
22	3.9	0.0	0.0	chr17	48153895	48153921	(35103520)	+	(A)n	Simple_repeat	1	27	(0)	1627391
15	19.0	4.8	0.0	chr17	48541859	48541900	(34715541)	+	(TCCC)n	Simple_repeat	1	44	(0)	1628076
13	28.3	1.7	3.3	chr17	48546772	48546830	(34710611)	+	GA-rich	Low_complexity	1	60	(0)	1628081
14	6.9	9.7	0.0	chr17	48547552	48547584	(34709857)	+	GA-rich	Low_complexity	1	36	(0)	1628082
16	28.3	0.0	0.0	chr17	48548322	48548372	(34709069)	+	(TTTTT)n	Simple_repeat	1	51	(0)	1628083
12	17.5	0.0	5.6	chr17	48555184	48555219	(34702222)	+	GA-rich	Low_complexity	1	36	(0)	1628090
65	12.5	4.7	0.8	chr17	48555273	48555400	(34702041)	+	GA-rich	Low_complexity	1	134	(0)	1628090
16	13.2	0.0	0.0	chr17	48555663	48555687	(34701754)	+	(C)n	Simple_repeat	1	25	(0)	1628091
26	20.3	0.0	0.0	chr17	48555970	48556020	(34701421)	+	(CA)n	Simple_repeat	1	51	(0)	1628092
22	18.4	0.0	6.2	chr17	48576409	48576472	(34680969)	+	(CTCTTT)n	Simple_repeat	1	64	(0)	1628111
25	7.9	2.5	0.0	chr17	48577529	48577568	(34679873)	+	(CCT)n	Simple_repeat	1	41	(0)	1628112
24	27.0	1.2	2.4	chr17	48578022	48578104	(34679337)	+	(CGG)n	Simple_repeat	1	84	(0)	1628113
15	19.6	0.0	0.0	chr17	48593811	48593839	(34663602)	+	G-rich	Low_complexity	1	29	(0)	1628127
18	19.6	0.0	0.0	chr17	48626377	48626411	(34631030)	+	(C)n	Simple_repeat	1	35	(0)	1628157
17	15.4	0.0	2.6	chr17	48626805	48626842	(34630599)	+	G-rich	Low_complexity	1	38	(0)	1628158
2495	7.1	0.0	1.0	chr17	48891859	48892166	(34365275)	C	AluSx	SINE/Alu	(7)	305	1	1628750
1505	11.0	18.0	2.0	chr17	48972023	48972268	(34285173)	+	AluSx4	SINE/Alu	1	294	(16)	1628949
16	14.2	0.0	0.0	chr17	48972489	48972519	(34284922)	+	(CACCCC)n	Simple_repeat	1	31	(0)	1628950
19	0.0	0.0	0.0	chr17	48997363	48997383	(34260058)	+	(T)n	Simple_repeat	1	21	(0)	1629009
15	7.2	6.9	0.0	chr17	48998498	48998526	(34258915)	+	(GCG)n	Simple_repeat	1	31	(0)	1629010
1085	24.4	9.0	1.6	chr17	49149683	49150053	(34107388)	C	L1ME3G	LINE/L1	(461)	463	63	1629313
6541	5.0	0.4	2.6	chr17	49150063	49150939	(34106502)	+	SVA_D	Retroposon/SVA	549	1386	(0)	1629316
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
304	26.6	1.2	4.8	chr17	49435544	49435626	(33821815)	+	MIR3	SINE/MIR	92	171	(37)	1629945
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
2540	5.3	0.0	0.7	chr17	49740250	49740548	(33516893)	C	AluY	SINE/Alu	(14)	297	1	1630482
904	16.8	13.7	1.0	chr17	49761432	49761635	(33495806)	C	MIR	SINE/MIR	(11)	251	18	1630517
248	26.8	6.6	0.0	chr17	49851659	49851729	(33405712)	C	MIRb	SINE/MIR	(169)	99	24	1630689
30	8.3	0.0	0.0	chr17	50129804	50129842	(33127599)	+	(GT)n	Simple_repeat	1	39	(0)	1631212
22	6.2	5.9	0.0	chr17	50129845	50129878	(33127563)	+	(AG)n	Simple_repeat	1	36	(0)	1631213
181	25.9	1.8	1.8	chr17	50140519	50140573	(33116868)	C	MIR1_Amn	SINE/MIR	(78)	152	98	1631227
12	16.0	0.0	3.3	chr17	50150989	50151018	(33106423)	+	(CGCCG)n	Simple_repeat	1	30	(0)	1631240
18	4.0	0.0	0.0	chr17	50151017	50151042	(33106399)	+	(CCTC)n	Simple_repeat	1	26	(0)	1631241
16	22.0	2.0	2.0	chr17	50151187	50151236	(33106205)	+	(CCCTC)n	Simple_repeat	1	51	(0)	1631242
11	13.3	5.7	2.7	chr17	50201182	50201216	(33056225)	+	(CTCCCG)n	Simple_repeat	1	37	(0)	1631308
506	30.5	8.8	2.9	chr17	50398307	50398552	(32858889)	+	MIR	SINE/MIR	1	262	(0)	1631696
467	20.1	8.8	8.8	chr17	50398563	50398709	(32858732)	+	L2c	LINE/L2	3241	3387	(0)	1631697
26	28.1	1.2	1.2	chr17	50565091	50565170	(32692271)	+	(AC)n	Simple_repeat	1	81	(0)	1632039
16	6.3	2.6	7.5	chr17	50565222	50565260	(32692181)	+	(GTCTCT)n	Simple_repeat	1	40	(0)	1632040
202	35.3	5.8	1.7	chr17	54968066	54968202	(28289239)	+	MIR3	SINE/MIR	40	181	(87)	1638844
241	29.9	3.6	7.0	chr17	55210683	55210883	(28046558)	C	L1ME4a	LINE/L1	(133)	5991	5798	1639243
1070	10.1	0.0	2.5	chr17	55211224	55211382	(28046059)	C	AluSx	SINE/Alu	(0)	312	158	1639244
72	8.7	0.9	1.7	chr17	55734130	55734243	(27523198)	+	(TC)n	Simple_repeat	1	115	(0)	1640144
186	17.1	0.0	2.8	chr17	55734304	55734339	(27523102)	C	MIRb	SINE/MIR	(38)	230	196	1640145
334	36.8	0.0	0.0	chr17	55734564	55734677	(27522764)	C	MIR3	SINE/MIR	(1)	207	94	1640146
13	13.1	0.0	0.0	chr17	56833697	56833721	(26423720)	+	(CGG)n	Simple_repeat	1	25	(0)	1642079
12	20.1	6.2	2.0	chr17	56833757	56833804	(26423637)	+	(GCGGCGC)n	Simple_repeat	1	51	(0)	1642080
2405	9.7	0.0	0.0	chr17	56960242	56960549	(26296892)	+	AluSx1	SINE/Alu	1	308	(4)	1642327
18	18.0	3.9	1.9	chr17	56960631	56960682	(26296759)	+	(CATCCC)n	Simple_repeat	1	54	(0)	1642328
16	22.7	4.6	2.9	chr17	56960706	56960770	(26296671)	+	(GCCC)n	Simple_repeat	1	68	(0)	1642329
301	22.2	4.9	11.4	chr17	57068432	57068563	(26188878)	+	AluJb	SINE/Alu	180	302	(0)	1642585
191	18.6	15.7	0.0	chr17	57130927	57130969	(26126472)	+	MIR3	SINE/MIR	54	104	(104)	1642707
14	17.2	2.4	2.4	chr17	57131184	57131224	(26126217)	+	(CCACCCC)n	Simple_repeat	1	42	(0)	1642708
295	21.0	11.5	1.0	chr17	57131265	57131365	(26126076)	+	MER5A1	DNA/hAT-Charlie	52	164	(2)	1642709
30	26.3	1.1	1.7	chr17	57256433	57256521	(26000920)	+	G-rich	Low_complexity	1	88	(0)	1642979
15	22.2	4.3	0.0	chr17	57256609	57256655	(26000786)	+	GA-rich	Low_complexity	1	49	(0)	1642980
16	18.6	0.0	2.9	chr17	57257428	57257461	(25999980)	+	(TC)n	Simple_repeat	1	34	(0)	1642981
1694	16.6	0.7	5.8	chr17	57447090	57447402	(25810039)	C	AluJr	SINE/Alu	(14)	298	2	1643289
386	31.1	12.8	0.0	chr17	57851419	57851595	(25405846)	C	MIRb	SINE/MIR	(59)	209	7	1643967
45	0.0	2.4	0.0	chr17	57851671	57851712	(25405729)	+	(CA)n	Simple_repeat	1	43	(0)	1643968
708	28.6	5.6	3.2	chr17	57939580	57939857	(25317584)	+	MLT1O	LTR/ERVL-MaLR	6	290	(252)	1644159
289	22.9	2.8	0.0	chr17	57939990	57940059	(25317382)	+	MLT1O	LTR/ERVL-MaLR	469	540	(2)	1644159
247	30.6	9.3	1.6	chr17	57940065	57940197	(25317244)	C	MIRc	SINE/MIR	(105)	163	20	1644160
23	9.4	0.0	0.0	chr17	57988189	57988223	(25269218)	+	(GCG)n	Simple_repeat	1	35	(0)	1644235
15	19.1	5.3	3.3	chr17	58084143	58084199	(25173242)	+	(GGCC)n	Simple_repeat	1	60	(0)	1644418
20	0.0	6.7	0.0	chr17	58328826	58328855	(24928586)	+	(CCT)n	Simple_repeat	1	32	(0)	1644825
11	36.9	0.0	0.0	chr17	58331488	58331541	(24925900)	+	(CCCCCT)n	Simple_repeat	1	54	(0)	1644828
12	4.3	8.3	0.0	chr17	58338042	58338065	(24919376)	+	(CAG)n	Simple_repeat	1	26	(0)	1644834
498	20.5	4.2	1.6	chr17	59329979	59330105	(23927336)	C	MIR3	SINE/MIR	(14)	194	64	1647023
18	6.7	6.2	0.0	chr17	59365806	59365837	(23891604)	+	(GGA)n	Simple_repeat	1	34	(0)	1647086
526	4.2	0.0	0.0	chr17	59618809	59618880	(23638561)	C	Alu	SINE/Alu	(6)	305	234	1647643
2715	4.1	0.0	5.0	chr17	60079102	60079421	(23178020)	+	AluY	SINE/Alu	1	304	(7)	1648531
1444	20.6	5.0	0.6	chr17	60392951	60393292	(22864149)	C	L1MB3	LINE/L1	(3)	6180	5823	1649145
30	0.0	0.0	0.0	chr17	62065374	62065401	(21192040)	+	(CCG)n	Simple_repeat	1	28	(0)	1652181
17	22.8	6.1	3.5	chr17	62065410	62065491	(21191950)	+	(CCGG)n	Simple_repeat	1	87	(0)	1652182
2331	11.2	0.0	0.0	chr17	62143206	62143510	(21113931)	C	AluSp	SINE/Alu	(8)	305	1	1652360
3410	20.2	3.0	8.6	chr17	62143511	62143600	(21113841)	C	L1MB3	LINE/L1	(2413)	5582	5495	1652357
318	14.8	3.2	0.0	chr17	62143601	62143661	(21113780)	C	Alu	SINE/Alu	(0)	301	239	1652361
4052	10.4	1.9	2.1	chr17	62143664	62143828	(21113613)	+	MER61E	LTR/ERV1	1	161	(408)	1652362
2278	8.5	0.0	2.9	chr17	62143829	62144135	(21113306)	+	AluSg	SINE/Alu	1	298	(12)	1652363
4052	10.4	1.9	2.1	chr17	62144136	62144539	(21112902)	+	MER61E	LTR/ERV1	162	569	(0)	1652362
2527	4.8	1.3	28.7	chr17	62147305	62147946	(21109495)	+	LTR7B	LTR/ERV1	1	464	(0)	1652370
2030	13.6	3.0	0.3	chr17	62172450	62172743	(21084698)	+	AluSx4	SINE/Alu	1	302	(8)	1652431
2400	6.8	1.6	1.6	chr17	62173104	62173414	(21084027)	C	AluSp	SINE/Alu	(0)	313	3	1652432
15	40.2	0.0	0.0	chr17	62478685	62478768	(20778673)	+	(CCC)n	Simple_repeat	1	84	(0)	1653080
21	18.0	8.7	0.0	chr17	62478994	62479062	(20778379)	+	(CCGGCGC)n	Simple_repeat	1	75	(0)	1653081
12	20.7	5.1	0.0	chr17	62479131	62479169	(20778272)	+	(CGG)n	Simple_repeat	1	41	(0)	1653082
16	0.0	0.0	0.0	chr17	62479269	62479288	(20778153)	+	(GCG)n	Simple_repeat	1	20	(0)	1653083
12	31.0	1.6	1.6	chr17	62479289	62479319	(20778122)	+	G-rich	Low_complexity	15	62	(0)	1653084
231	32.2	0.0	8.0	chr17	63775071	63775195	(19482246)	+	L2c	LINE/L2	3258	3372	(15)	1655335
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
2391	6.7	1.0	0.3	chr17	63843361	63843659	(19413782)	+	AluSq2	SINE/Alu	9	309	(4)	1655442
193	24.5	4.4	2.0	chr17	63912034	63912100	(19345341)	C	L3b	LINE/CR1	(6)	4093	4057	1655569
392	28.0	9.6	3.0	chr17	63912169	63912369	(19345072)	C	MIRc	SINE/MIR	(11)	257	38	1655570
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
254	27.3	20.0	3.4	chr17	64329000	64329300	(18928141)	+	L2c	LINE/L2	2948	3295	(80)	1656337
18	14.9	0.0	0.0	chr17	64448937	64448966	(18808475)	+	(G)n	Simple_repeat	1	30	(0)	1656605
693	22.9	2.5	1.9	chr17	64572655	64572814	(18684627)	+	MER21C	LTR/ERVL	411	571	(367)	1656821
209	26.1	16.1	2.5	chr17	64630884	64631001	(18626440)	C	L2	LINE/L2	(1334)	2085	1949	1656936
1336	13.6	0.6	0.0	chr17	64631021	64631197	(18626244)	+	AluJr	SINE/Alu	1	178	(134)	1656937
28	20.9	1.3	2.6	chr17	64631206	64631281	(18626160)	+	G-rich	Low_complexity	1	77	(0)	1656938
69	3.0	0.0	0.0	chr17	64631282	64631349	(18626092)	+	(GA)n	Simple_repeat	1	68	(0)	1656939
13	17.2	5.1	0.0	chr17	64631657	64631695	(18625746)	+	A-rich	Low_complexity	1	41	(0)	1656940
267	29.5	0.0	1.3	chr17	64631765	64631843	(18625598)	C	MIR	SINE/MIR	(1)	261	184	1656941
18	4.7	0.0	0.0	chr17	64631962	64631983	(18625458)	+	(G)n	Simple_repeat	1	22	(0)	1656942
2108	9.8	0.4	0.4	chr17	64631996	64632250	(18625191)	C	AluSq2	SINE/Alu	(50)	263	9	1656943
27	11.5	5.2	1.6	chr17	64661886	64661943	(18595498)	+	(CGG)n	Simple_repeat	1	61	(0)	1657017
25	22.3	1.6	0.0	chr17	64662112	64662174	(18595267)	+	(GCC)n	Simple_repeat	1	64	(0)	1657018
30	7.0	2.9	7.0	chr17	64662354	64662422	(18595019)	+	G-rich	Low_complexity	1	71	(0)	1657019
1150	12.7	0.0	1.2	chr17	64918754	64918918	(18338523)	+	AluSx1	SINE/Alu	2	164	(148)	1657590
12	21.5	4.4	2.1	chr17	64918991	64919035	(18338406)	+	(CGG)n	Simple_repeat	1	47	(0)	1657591
18	7.0	3.3	0.0	chr17	64919170	64919199	(18338242)	+	(GGC)n	Simple_repeat	1	31	(0)	1657592
13	29.4	1.2	6.0	chr17	64919291	64919373	(18338068)	+	G-rich	Low_complexity	1	84	(0)	1657593
2065	13.0	2.3	0.3	chr17	65075359	65075539	(18181902)	C	AluSz	SINE/Alu	(5)	307	128	1657901
1916	19.6	2.0	10.3	chr17	65199128	65199488	(18057953)	C	L1MB8	LINE/L1	(0)	6178	5824	1658194
314	31.0	10.2	4.3	chr17	66343517	66343819	(16913622)	C	L2b	LINE/L2	(610)	2809	2487	1660123
359	22.1	0.0	4.9	chr17	66344003	66344083	(16913358)	+	Charlie4z	DNA/hAT-Charlie	91	167	(0)	1660127
768	24.5	2.9	7.7	chr17	66580611	66580897	(16676544)	C	L1ME3A	LINE/L1	(0)	6173	5901	1660494
1145	21.2	1.3	1.7	chr17	66581197	66581436	(16676005)	C	MER58B	DNA/hAT-Charlie	(9)	332	94	1660495
23	14.6	4.7	3.0	chr17	67245234	67245297	(16012144)	+	(CCTCCCG)n	Simple_repeat	1	67	(0)	1661589
15	12.2	0.0	0.0	chr17	67825952	67825978	(15431463)	+	(GCC)n	Simple_repeat	1	27	(0)	1662901
20	13.2	5.6	3.5	chr17	67825998	67826051	(15431390)	+	(CGG)n	Simple_repeat	1	57	(0)	1662902
36	31.8	0.0	0.8	chr17	67826114	67826239	(15431202)	+	GA-rich	Low_complexity	1	126	(0)	1662903
13	19.1	0.0	0.0	chr17	68292140	68292169	(14965272)	+	(GCA)n	Simple_repeat	1	30	(0)	1663905
916	26.9	10.5	2.2	chr17	68463407	68463817	(14793624)	C	L2a	LINE/L2	(0)	3426	2978	1664234
15	14.8	2.4	4.8	chr17	68512499	68512539	(14744902)	+	(CGC)n	Simple_repeat	1	42	(0)	1664337
1985	16.6	0.3	0.0	chr17	74007986	74008287	(9249154)	C	AluSz6	SINE/Alu	(1)	311	9	1673330
717	24.1	0.0	6.9	chr17	74008288	74008358	(9249083)	+	MER5A1	DNA/hAT-Charlie	107	166	(0)	1673329
295	27.8	8.7	2.5	chr17	74210435	74210552	(9046889)	+	MIRb	SINE/MIR	73	198	(70)	1673696
464	30.6	5.2	5.3	chr17	74332789	74332994	(8924447)	+	MIRc	SINE/MIR	15	221	(47)	1673957
466	20.2	3.5	0.2	chr17	74333243	74333359	(8924082)	C	L1MB8	LINE/L1	(225)	6017	5896	1673958
2055	11.7	1.4	0.0	chr17	74333362	74333644	(8923797)	C	AluSz	SINE/Alu	(9)	303	17	1673959
2390	22.1	5.8	1.5	chr17	74667310	74668083	(8589358)	+	L1MCa	LINE/L1	2387	3205	(3359)	1674586
3002	14.1	0.8	2.3	chr17	74668167	74668645	(8588796)	+	MER4A1	LTR/ERV1	1	472	(0)	1674591
235	31.1	10.0	2.2	chr17	74776881	74777018	(8480423)	+	L3	LINE/CR1	3934	4083	(16)	1674794
2358	6.8	2.0	0.0	chr17	74777638	74777930	(8479511)	+	AluSq2	SINE/Alu	1	299	(14)	1674795
17	0.0	0.0	0.0	chr17	74840427	74840445	(8416996)	+	(C)n	Simple_repeat	1	19	(0)	1674855
976	20.3	13.5	0.7	chr17	74961051	74961257	(8296184)	+	MER33	DNA/hAT-Charlie	1	224	(100)	1675068
2436	9.0	0.0	0.0	chr17	74961258	74961567	(8295874)	C	AluSx1	SINE/Alu	(2)	310	1	1675069
16	8.3	0.0	0.0	chr17	75182636	75182661	(8074780)	+	(GGGA)n	Simple_repeat	1	26	(0)	1675545
16	0.0	0.0	0.0	chr17	75904771	75904787	(7352654)	+	(C)n	Simple_repeat	1	17	(0)	1676997
1887	8.6	6.2	6.5	chr17	76078154	76078443	(7178998)	C	AluSq2	SINE/Alu	(0)	313	25	1677346
16	13.9	5.9	3.7	chr17	76239180	76239230	(7018211)	+	A-rich	Low_complexity	1	54	(0)	1677638
14	12.7	0.0	0.0	chr17	76239528	76239553	(7017888)	+	(CCA)n	Simple_repeat	1	26	(0)	1677639
13	7.8	3.5	3.3	chr17	76239773	76239801	(7017640)	+	(GGGCC)n	Simple_repeat	1	30	(0)	1677640
328	20.8	2.5	1.3	chr17	76268230	76268307	(6989134)	C	MIR3	SINE/MIR	(48)	160	82	1677703
14	14.4	5.0	2.4	chr17	76268483	76268522	(6988919)	+	GA-rich	Low_complexity	1	42	(0)	1677704
2422	9.2	0.0	0.3	chr17	76268732	76269034	(6988407)	C	AluSx1	SINE/Alu	(10)	302	1	1677705
1622	11.0	0.0	0.0	chr17	76286668	76286894	(6970547)	+	AluSq2	SINE/Alu	76	302	(11)	1677723
54	1.8	3.5	0.0	chr17	76287031	76287088	(6970353)	+	(CA)n	Simple_repeat	1	60	(0)	1677724
388	30.5	11.5	1.5	chr17	76528725	76528924	(6728517)	+	MIRc	SINE/MIR	9	254	(14)	1678221
202	29.8	4.0	4.8	chr17	76557890	76558010	(6699431)	+	MIR	SINE/MIR	96	216	(52)	1678274
21	6.3	0.0	2.9	chr17	76726788	76726822	(6530619)	+	(CCGCC)n	Simple_repeat	1	35	(0)	1678615
257	12.8	4.1	0.0	chr17	77280778	77280824	(5976617)	C	MIR3	SINE/MIR	(44)	164	116	1679796
14	16.1	0.0	0.0	chr17	77281154	77281182	(5976259)	+	(CCTGG)n	Simple_repeat	1	29	(0)	1679797
17	22.7	0.0	0.0	chr17	77281362	77281397	(5976044)	+	G-rich	Low_complexity	1	36	(0)	1679798
409	34.5	8.7	2.9	chr17	77389568	77389839	(5867602)	C	L3b	LINE/CR1	(6)	5226	4938	1679977
1798	10.6	10.9	0.8	chr17	77459712	77459975	(5797466)	C	AluSx3	SINE/Alu	(17)	294	1	1680076
1848	15.8	14.1	1.4	chr17	77459976	77460153	(5797288)	C	MSTB	LTR/ERVL-MaLR	(228)	198	1	1680075
184	29.0	8.2	3.9	chr17	78000303	78000431	(5257010)	+	L2a	LINE/L2	3291	3425	(1)	1681033
16	9.8	0.0	0.0	chr17	78258857	78258878	(4998563)	+	(G)n	Simple_repeat	1	22	(0)	1681508
13	11.7	3.6	0.0	chr17	78259123	78259150	(4998291)	+	G-rich	Low_complexity	1	29	(0)	1681509
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
249	26.1	3.0	0.0	chr17	78315419	78315483	(4941958)	C	L2a	LINE/L2	(3)	3423	3357	1681636
17	7.3	3.5	0.0	chr17	78315835	78315863	(4941578)	+	(CCT)n	Simple_repeat	1	30	(0)	1681637
214	31.2	7.4	1.8	chr17	78316046	78316159	(4941282)	C	L2a	LINE/L2	(20)	3355	3235	1681636
18	23.6	1.6	3.1	chr17	78484799	78484861	(4772580)	+	(CGCCC)n	Simple_repeat	1	64	(0)	1681917
1903	31.4	8.5	4.9	chr17	78558837	78560236	(4697205)	+	L2a	LINE/L2	1974	3426	(0)	1682038
313	34.0	12.1	1.0	chr17	78782703	78782901	(4474540)	C	X7C_LINE	LINE/CR1	(5)	231	8	1682447
14	14.4	0.0	8.7	chr17	79797731	79797776	(3459665)	+	(CCCCCG)n	Simple_repeat	1	46	(0)	1683952
17	35.2	0.0	0.0	chr17	79797777	79797804	(3459637)	+	(CCCCCGC)n	Simple_repeat	2	75	(0)	1683953
15	24.8	4.3	2.7	chr17	79798020	79798089	(3459352)	+	(CTGCCCG)n	Simple_repeat	1	73	(0)	1683954
18	18.8	2.0	2.0	chr17	79810553	79810602	(3446839)	+	(CCGCTC)n	Simple_repeat	1	51	(0)	1683966
44	7.6	0.0	0.0	chr17	79810659	79810714	(3446727)	+	(TG)n	Simple_repeat	1	56	(0)	1683967
18	19.5	0.0	0.0	chr17	79810795	79810829	(3446612)	+	(C)n	Simple_repeat	1	35	(0)	1683968
12	21.0	2.5	2.4	chr17	79831917	79831956	(3425485)	+	(TCCCC)n	Simple_repeat	1	41	(0)	1684002
22	11.9	0.0	0.0	chr17	79834113	79834149	(3423292)	+	(GCC)n	Simple_repeat	1	37	(0)	1684005
13	26.4	0.0	3.8	chr17	79834263	79834315	(3423126)	+	(GGCGGCT)n	Simple_repeat	1	53	(0)	1684006
36	0.0	0.0	0.0	chr17	79834442	79834474	(3422967)	+	(GTG)n	Simple_repeat	1	33	(0)	1684007
19	17.3	5.8	0.0	chr17	79834476	79834527	(3422914)	+	G-rich	Low_complexity	1	55	(0)	1684008
19	12.1	3.2	7.7	chr17	79838874	79838936	(3418505)	+	(CCCCACC)n	Simple_repeat	1	65	(0)	1684010
20	26.3	2.0	5.0	chr17	79838906	79839004	(3418437)	+	(CCCCGCG)n	Simple_repeat	1	101	(0)	1684011
13	15.6	2.0	7.8	chr17	79839129	79839178	(3418263)	+	(CCGCCGG)n	Simple_repeat	1	51	(0)	1684012
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
17	24.3	5.3	2.5	chr17	79991621	79991696	(3265745)	+	(GGCA)n	Simple_repeat	1	80	(0)	1684258
24	16.6	0.0	0.0	chr17	79991691	79991738	(3265703)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1684259
2290	10.8	0.0	1.9	chr17	80069464	80069778	(3187663)	+	AluSc8	SINE/Alu	1	309	(2)	1684408
11	13.2	5.7	2.7	chr17	80456126	80456160	(2801281)	+	G-rich	Low_complexity	1	37	(0)	1685039
541	24.4	1.0	14.5	chr17	80988787	80988884	(2268557)	C	MER58C	DNA/hAT-Charlie	(31)	184	105	1685745
49	0.0	0.0	0.0	chr17	80988885	80988926	(2268515)	+	(GT)n	Simple_repeat	1	42	(0)	1685747
541	24.4	1.0	14.5	chr17	80988927	80989032	(2268409)	C	MER58C	DNA/hAT-Charlie	(111)	104	1	1685745
587	35.5	5.0	2.2	chr17	80989236	80990011	(2267430)	+	ERVL-E-int	LTR/ERVL	1145	1952	(3762)	1685748
521	26.9	10.9	3.6	chr17	81003509	81003813	(2253628)	C	L1ME1	LINE/L1	(54)	6125	5796	1685765
32	5.3	0.0	0.0	chr17	81004171	81004209	(2253232)	+	(GCCCA)n	Simple_repeat	1	39	(0)	1685766
14	17.5	6.7	0.0	chr17	81004288	81004332	(2253109)	+	(GACCCCTC)n	Simple_repeat	1	48	(0)	1685767
15	5.5	0.0	0.0	chr17	81057974	81057992	(2199449)	+	(C)n	Simple_repeat	1	19	(0)	1685828
919	15.6	1.2	2.4	chr17	81098427	81098590	(2158851)	C	L1MB3	LINE/L1	(0)	6183	6022	1685860
302	33.2	9.2	1.4	chr17	81372948	81373175	(1884266)	+	L2a	LINE/L2	2837	3083	(343)	1686199
15	21.6	2.3	0.0	chr17	81386947	81386989	(1870452)	+	G-rich	Low_complexity	1	44	(0)	1686222
17	18.0	2.1	3.2	chr17	81399423	81399474	(1857967)	+	G-rich	Low_complexity	1	51	(0)	1686231
16	6.4	12.1	0.0	chr17	81512837	81512869	(1744572)	+	(GC)n	Simple_repeat	1	37	(0)	1686352
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
318	31.8	16.4	1.1	chr17	81665674	81665854	(1591587)	+	MIRb	SINE/MIR	45	258	(10)	1686612
235	25.3	14.6	0.0	chr17	81665925	81666070	(1591371)	+	L2	LINE/L2	113	283	(3136)	1686613
2620	3.2	0.0	2.3	chr17	81667317	81667626	(1589815)	C	AluY	SINE/Alu	(8)	303	1	1686614
170	12.3	6.9	1.0	chr17	81742179	81742539	(1514902)	+	(CA)n	Simple_repeat	1	386	(0)	1686732
19	20.2	5.9	0.0	chr17	81860579	81860629	(1396812)	+	(GC)n	Simple_repeat	1	54	(0)	1686834
15	24.0	5.6	2.6	chr17	81868823	81868894	(1388547)	+	(TCCG)n	Simple_repeat	1	76	(0)	1686844
16	20.9	0.0	0.0	chr17	81923249	81923281	(1334160)	+	(C)n	Simple_repeat	1	33	(0)	1686911
21	21.1	0.0	0.0	chr17	82098063	82098111	(1159330)	+	(CCCCGG)n	Simple_repeat	1	49	(0)	1687135
12	18.9	7.1	0.0	chr17	82098434	82098475	(1158966)	+	G-rich	Low_complexity	1	45	(0)	1687136
38	9.3	0.0	1.6	chr17	82119081	82119141	(1138300)	+	(GGGTGG)n	Simple_repeat	1	61	(0)	1687167
15	16.8	5.0	0.0	chr17	82212568	82212607	(1044834)	+	(CGCCGC)n	Simple_repeat	1	42	(0)	1687345
1035	15.1	1.3	0.0	chr17	82214887	82215038	(1042403)	+	AluJr	SINE/Alu	138	291	(21)	1687350
1022	18.6	7.7	2.1	chr17	82215061	82215340	(1042101)	+	MLT1B	LTR/ERVL-MaLR	84	380	(10)	1687351
18	16.6	1.6	7.8	chr17	82242027	82242093	(1015348)	+	(GGAGT)n	Simple_repeat	1	62	(0)	1687370
664	0.0	0.0	0.0	chr17	82494721	82494792	(762649)	C	tRNA-Met-i	tRNA	(3)	72	1	1687730
2441	6.4	1.3	0.0	chr17	82494999	82495294	(762147)	+	AluSp	SINE/Alu	1	300	(13)	1687731
2351	6.8	0.0	1.4	chr17	82717438	82717733	(539708)	+	AluSg	SINE/Alu	1	292	(18)	1688136
88	26.3	5.1	1.9	chr17	82717850	82718204	(539237)	+	(GT)n	Simple_repeat	1	373	(0)	1688137
21	0.0	0.0	0.0	chr17	83080602	83080624	(176817)	+	(T)n	Simple_repeat	1	23	(0)	1688555
29	0.0	0.0	0.0	chr17	83080858	83080884	(176557)	+	(GCCCCC)n	Simple_repeat	1	27	(0)	1688556
1409	17.2	8.4	0.0	chr18	157654	157915	(80215370)	C	Tigger1	DNA/TcMar-Tigger	(2073)	345	60	1689317
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
953	9.5	0.0	0.0	chr18	381343	381479	(79991806)	+	L1MA5	LINE/L1	6158	6294	(6)	1689705
658	29.0	7.8	2.6	chr18	381532	381881	(79991404)	+	L1MC4a	LINE/L1	5526	5895	(1987)	1689706
17	22.5	0.0	0.0	chr18	812316	812351	(79560934)	+	(C)n	Simple_repeat	1	36	(0)	1690509
2181	15.2	9.6	6.7	chr18	2302843	2303392	(78069893)	+	LTR10A	LTR/ERV1	1	612	(21)	1692473
1842	13.7	1.1	1.5	chr18	2303485	2303755	(78069530)	+	AluJb	SINE/Alu	38	307	(5)	1692474
2200	10.7	0.7	0.0	chr18	3038015	3038304	(77334981)	C	AluSx1	SINE/Alu	(20)	292	1	1693656
2455	5.5	0.7	0.0	chr18	3038341	3038632	(77334653)	+	AluY	SINE/Alu	1	294	(17)	1693657
1819	15.4	0.0	3.4	chr18	3038635	3038926	(77334359)	C	AluJb	SINE/Alu	(30)	282	1	1693658
1821	17.8	17.1	5.6	chr18	3359570	3360052	(77013233)	C	Ricksha_c	DNA/MULE-MuDR	(1143)	905	356	1694224
678	24.2	1.2	0.0	chr18	3360169	3360329	(77012956)	+	MER53	DNA/hAT	10	172	(21)	1694225
2327	10.6	0.0	0.0	chr18	3446183	3446483	(76926802)	C	AluSx	SINE/Alu	(11)	301	1	1694435
14	12.6	0.0	7.5	chr18	3448257	3448296	(76924989)	+	(CCTCCTC)n	Simple_repeat	1	40	(0)	1694436
17	15.4	6.2	5.8	chr18	3450073	3450137	(76923148)	+	(GCG)n	Simple_repeat	1	69	(0)	1694438
14	18.7	5.0	4.8	chr18	3450196	3450255	(76923030)	+	GA-rich	Low_complexity	1	63	(0)	1694439
13	28.8	0.0	2.1	chr18	3452651	3452698	(76920587)	+	(TCC)n	Simple_repeat	1	48	(0)	1694441
16	5.3	0.0	0.0	chr18	3594007	3594026	(76779259)	+	(A)n	Simple_repeat	1	20	(0)	1694718
21	12.6	2.2	2.2	chr18	3594322	3594366	(76778919)	+	(CTCC)n	Simple_repeat	1	46	(0)	1694719
190	33.9	6.8	0.0	chr18	3596598	3596706	(76776579)	+	L2a	LINE/L2	3305	3421	(5)	1694721
13	15.8	6.8	2.1	chr18	3655068	3655111	(76718174)	+	(CTCCCCA)n	Simple_repeat	1	47	(0)	1694845
23	15.5	6.0	0.0	chr18	5296223	5296272	(75077013)	+	(GC)n	Simple_repeat	1	53	(0)	1697045
22	25.9	0.9	6.6	chr18	8705449	8705553	(71667732)	+	G-rich	Low_complexity	1	106	(0)	1701817
54082	6.1	1.9	0.5	chr18	8914110	8920902	(71452383)	+	Harlequin-int	LTR/ERV1	1	6896	(0)	1702087
33	0.0	0.0	0.0	chr18	9039316	9039343	(71333942)	+	(CA)n	Simple_repeat	1	28	(0)	1702322
18	23.6	1.6	3.1	chr18	9334698	9334760	(71038525)	+	G-rich	Low_complexity	1	64	(0)	1702841
12	20.1	5.0	0.0	chr18	9335075	9335114	(71038171)	+	G-rich	Low_complexity	1	42	(0)	1702842
18	14.7	0.0	0.0	chr18	9614327	9614356	(70758929)	+	(C)n	Simple_repeat	1	30	(0)	1703334
3302	15.8	7.6	5.0	chr18	9966114	9966513	(70406772)	+	MER44D	DNA/TcMar-Tigger	9	448	(257)	1703936
22	10.5	0.0	0.0	chr18	11998920	11998950	(68374335)	+	(C)n	Simple_repeat	1	31	(0)	1706760
1065	27.6	7.2	7.4	chr18	12048026	12048653	(68324632)	C	REP522	Satellite/telo	(98)	626	1	1706852
27	3.5	0.0	0.0	chr18	12048654	12048683	(68324602)	+	(CTCCAGC)n	Simple_repeat	1	30	(0)	1706853
1065	25.5	11.6	6.9	chr18	12048684	12048784	(68324501)	C	REP522	Satellite/telo	(560)	1257	1162	1706852
16	9.8	0.0	0.0	chr18	12272150	12272171	(68101114)	+	(G)n	Simple_repeat	1	22	(0)	1707116
29	0.0	0.0	0.0	chr18	12272172	12272198	(68101087)	+	(GTT)n	Simple_repeat	1	27	(0)	1707117
2379	10.8	0.0	0.0	chr18	12272207	12272511	(68100774)	C	AluSx	SINE/Alu	(6)	306	2	1707118
565	15.9	8.0	0.8	chr18	12477294	12477420	(67895865)	+	MER3	DNA/hAT-Charlie	65	201	(8)	1707506
385	35.2	4.7	8.3	chr18	12477496	12477870	(67895415)	C	L2c	LINE/L2	(15)	3372	3012	1707507
17	3.5	3.0	5.9	chr18	12657625	12657657	(67715628)	+	(CGG)n	Simple_repeat	1	34	(0)	1707864
12	10.0	0.0	0.0	chr18	21703519	21703540	(58669745)	+	(AAGC)n	Simple_repeat	1	22	(0)	1713144
314	14.6	9.5	0.0	chr18	22103800	22103872	(58269413)	C	MIRb	SINE/MIR	(78)	190	115	1713940
202	27.3	8.3	4.5	chr18	22103897	22104016	(58269269)	+	MIR	SINE/MIR	24	149	(119)	1713941
2325	18.3	2.9	1.1	chr18	22104028	22104515	(58268770)	+	L1MA9	LINE/L1	5771	6268	(44)	1713942
384	18.7	0.0	1.3	chr18	22668480	22668555	(57704730)	+	MIRb	SINE/MIR	65	139	(129)	1714849
782	23.6	8.6	0.6	chr18	22733895	22734214	(57639071)	+	L1MC5a	LINE/L1	2408	2755	(22)	1714945
1828	22.5	10.9	2.3	chr18	22734271	22734839	(57638446)	+	L1MDa	LINE/L1	639	1262	(5371)	1714946
2163	9.0	0.3	5.1	chr18	26468550	26468861	(53904424)	+	AluSz	SINE/Alu	1	297	(15)	1720966
191	37.0	2.1	1.1	chr18	31563683	31563775	(48809510)	C	L2c	LINE/L2	(42)	3345	3252	1727862
13	0.0	7.7	3.6	chr18	31563925	31563950	(48809335)	+	(TGGGG)n	Simple_repeat	1	28	(0)	1727863
272	20.0	1.8	0.0	chr18	31564053	31564107	(48809178)	C	Kanga11a	DNA/TcMar-Tc2	(2)	968	913	1727864
36	0.0	0.0	2.6	chr18	31943294	31943331	(48429954)	+	(GCGGGG)n	Simple_repeat	1	38	(0)	1728480
970	20.1	3.8	5.9	chr18	35173794	35174116	(45199169)	+	MER46C	DNA/TcMar-Tigger	2	317	(21)	1732944
202	23.1	0.0	0.0	chr18	35174121	35174159	(45199126)	C	MIRc	SINE/MIR	(117)	151	113	1732945
864	15.3	5.8	0.6	chr18	35174227	35174390	(45198895)	+	MLT1B	LTR/ERVL-MaLR	1	173	(217)	1732946
20	31.6	0.0	0.0	chr18	35174406	35174468	(45198817)	+	(CTCT)n	Simple_repeat	1	63	(0)	1732947
12	16.8	7.5	0.0	chr18	35174475	35174514	(45198771)	+	(CCCCCA)n	Simple_repeat	1	43	(0)	1732948
986	19.6	0.0	7.3	chr18	35174526	35174745	(45198540)	+	MLT1B	LTR/ERVL-MaLR	187	390	(0)	1732946
1249	18.6	5.7	18.6	chr18	35443827	35444255	(44929030)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	1733326
271	33.3	5.8	5.5	chr18	46918361	46918459	(33454826)	+	L2c	LINE/L2	2917	3020	(367)	1749456
14	12.3	5.4	2.6	chr18	48828892	48828928	(31544357)	+	(CCT)n	Simple_repeat	1	39	(0)	1752501
14	13.9	3.1	0.0	chr18	48952303	48952334	(31420951)	+	(CCCCCA)n	Simple_repeat	1	33	(0)	1752714
234	20.9	0.0	0.0	chr18	49178950	49178992	(31194293)	+	UCON4	Unknown	4	46	(257)	1753072
370	22.3	10.0	3.9	chr18	49179033	49179195	(31194090)	C	MIR3	SINE/MIR	(33)	175	3	1753073
974	16.8	7.4	4.6	chr18	49459831	49460067	(30913218)	+	L1MB7	LINE/L1	5941	6184	(0)	1753565
788	18.0	0.0	0.0	chr18	50785102	50785223	(29588062)	+	AluJb	SINE/Alu	164	285	(27)	1755729
8578	14.4	2.6	0.7	chr18	51005995	51006972	(29366313)	+	HERVL-int	LTR/ERVL	4288	5294	(360)	1756192
1184	21.5	15.6	11.4	chr18	51006973	51007429	(29365856)	+	LTR21A	LTR/ERV1	2	481	(0)	1756195
232	18.4	0.0	0.0	chr18	51039123	51039160	(29334125)	+	Charlie1b	DNA/hAT-Charlie	486	523	(0)	1756259
334	25.8	12.6	0.0	chr18	51039304	51039400	(29333885)	C	MLT1K	LTR/ERVL-MaLR	(52)	543	433	1756260
19	11.7	0.0	0.0	chr18	51039480	51039507	(29333778)	+	(C)n	Simple_repeat	1	28	(0)	1756261
257	24.8	9.5	0.0	chr18	51039508	51039612	(29333673)	C	MLT1K	LTR/ERVL-MaLR	(311)	284	169	1756260
17	8.7	8.1	0.0	chr18	55588240	55588276	(24785009)	+	G-rich	Low_complexity	1	40	(0)	1762869
11	20.8	6.8	0.0	chr18	55588576	55588619	(24784666)	+	(CTCACT)n	Simple_repeat	1	47	(0)	1762870
324	19.4	0.0	1.5	chr18	57234198	57234265	(23139020)	C	L2a	LINE/L2	(0)	3426	3360	1765252
13	17.2	4.9	2.3	chr18	58044093	58044133	(22329152)	+	(CCGC)n	Simple_repeat	1	43	(0)	1766702
14	12.0	0.0	3.5	chr18	58044202	58044230	(22329055)	+	GA-rich	Low_complexity	1	29	(0)	1766703
13	17.4	2.3	4.5	chr18	58044643	58044685	(22328600)	+	(GCGCCGG)n	Simple_repeat	1	44	(0)	1766704
10803	8.4	3.7	4.8	chr18	58459212	58460806	(21912479)	+	LTR12C	LTR/ERV1	3	1579	(0)	1767280
11	26.0	0.0	5.8	chr18	62526814	62526865	(17846420)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1773603
16	5.2	0.0	0.0	chr18	62527010	62527029	(17846256)	+	(C)n	Simple_repeat	1	20	(0)	1773604
16	24.2	3.3	1.6	chr18	75209091	75209150	(5164135)	+	(GCTCG)n	Simple_repeat	1	62	(0)	1790758
799	17.7	4.3	1.9	chr18	79678792	79678949	(694336)	C	AluJo	SINE/Alu	(121)	191	30	1795686
15	13.7	0.0	2.9	chr19	460288	460321	(58157295)	+	(CCCCTC)n	Simple_repeat	1	34	(0)	1796949
13	0.0	0.0	0.0	chr19	460627	460643	(58156973)	+	(CGG)n	Simple_repeat	1	17	(0)	1796950
28	23.0	6.9	4.1	chr19	489272	489430	(58128186)	+	(CCCCGAC)n	Simple_repeat	1	170	(0)	1797014
2629	3.6	0.0	0.3	chr19	566139	566439	(58051177)	+	AluY	SINE/Alu	1	300	(11)	1797163
747	19.8	10.8	4.5	chr19	566440	566617	(58050999)	C	LTR4	LTR/ERV1	(99)	497	297	1797162
347	29.4	3.7	1.9	chr19	566639	566854	(58050762)	C	LTR4	LTR/ERV1	(382)	214	3	1797162
1845	21.3	1.9	3.0	chr19	566855	567281	(58050335)	C	HERV3-int	LTR/ERV1	(11)	8415	7994	1797162
1623	13.0	2.5	1.0	chr19	567308	567724	(58049892)	C	HERV3-int	LTR/ERV1	(2112)	6314	5819	1797162
2367	7.8	0.7	0.3	chr19	664634	664940	(57952676)	C	AluSx	SINE/Alu	(4)	308	1	1797319
238	26.1	2.8	0.0	chr19	665163	665231	(57952385)	+	MIRb	SINE/MIR	49	119	(149)	1797320
11	12.2	2.4	7.0	chr19	665423	665453	(57952163)	+	(CCCTTC)n	Simple_repeat	1	30	(0)	1797321
2363	6.0	0.0	0.0	chr19	665454	665761	(57951855)	C	AluSx	SINE/Alu	(0)	312	1	1797322
12	18.7	0.0	3.0	chr19	681555	681587	(57936029)	+	(GCGCAG)n	Simple_repeat	1	33	(0)	1797356
1285	18.9	0.9	0.0	chr19	707462	707683	(57909933)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1797424
404	29.9	4.4	2.2	chr19	707687	707870	(57909746)	C	MIR	SINE/MIR	(27)	235	40	1797425
185	19.5	2.4	0.0	chr19	710603	710643	(57906973)	C	MIR3	SINE/MIR	(58)	150	109	1797431
2431	7.0	0.0	1.3	chr19	771058	771372	(57846244)	+	AluY	SINE/Alu	1	311	(0)	1797566
317	29.8	5.3	0.9	chr19	771406	771622	(57845994)	+	L2	LINE/L2	2783	3009	(410)	1797567
652	28.3	7.2	0.3	chr19	789226	789512	(57828104)	C	MLT1C	LTR/ERVL-MaLR	(154)	313	6	1797619
182	20.0	2.0	2.0	chr19	789549	789599	(57828017)	+	L2b	LINE/L2	3117	3167	(208)	1797620
1628	21.7	0.3	0.0	chr19	789839	790137	(57827479)	C	AluJb	SINE/Alu	(1)	311	12	1797621
58	7.9	5.2	0.0	chr19	847502	847597	(57770019)	+	(GAAA)n	Simple_repeat	1	101	(0)	1797747
346	25.0	10.8	0.8	chr19	848411	848547	(57769069)	+	MIR1_Amn	SINE/MIR	50	197	(11)	1797748
2052	6.8	3.9	8.4	chr19	860182	860503	(57757113)	C	AluSx1	SINE/Alu	(3)	309	3	1797778
15	10.8	3.3	0.0	chr19	861520	861549	(57756067)	+	(CCCACC)n	Simple_repeat	1	31	(0)	1797780
2174	9.3	0.4	0.0	chr19	906810	907114	(57710502)	C	AluSx1	SINE/Alu	(0)	312	1	1797857
336	31.0	3.7	3.1	chr19	907483	907642	(57709974)	C	MIRb	SINE/MIR	(93)	175	15	1797858
2271	11.8	0.0	1.6	chr19	909515	909829	(57707787)	+	AluSx	SINE/Alu	2	311	(1)	1797863
14	27.5	0.0	4.8	chr19	917233	917294	(57700322)	+	G-rich	Low_complexity	1	62	(0)	1797887
327	28.2	7.1	0.7	chr19	918187	918325	(57699291)	C	MIRb	SINE/MIR	(95)	173	24	1797889
13	22.8	5.9	0.0	chr19	918459	918509	(57699107)	+	G-rich	Low_complexity	1	54	(0)	1797890
709	16.1	7.7	3.7	chr19	921474	921590	(57696026)	+	L1PB1	LINE/L1	5789	5919	(232)	1797893
1480	3.9	0.6	0.6	chr19	921593	921770	(57695846)	C	AluY	SINE/Alu	(119)	192	15	1797895
307	23.1	7.1	0.0	chr19	944135	944212	(57673404)	C	L2b	LINE/L2	(18)	3357	3274	1797940
29	15.9	0.0	0.0	chr19	944326	944374	(57673242)	+	(GT)n	Simple_repeat	1	49	(0)	1797941
185	28.8	11.3	3.1	chr19	953638	953791	(57663825)	C	L2a	LINE/L2	(259)	3167	2998	1797961
19	22.9	1.3	6.4	chr19	1020685	1020761	(57596855)	+	G-rich	Low_complexity	1	78	(0)	1798078
13	14.3	3.0	2.9	chr19	1020920	1020952	(57596664)	+	(CCG)n	Simple_repeat	1	34	(0)	1798079
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
864	12.9	0.0	0.8	chr19	1027393	1027524	(57590092)	+	FLAM_C	SINE/Alu	1	131	(12)	1798102
17	0.0	0.0	0.0	chr19	1161907	1161925	(57455691)	+	(G)n	Simple_repeat	1	19	(0)	1798303
2485	5.4	0.0	0.3	chr19	1162179	1162476	(57455140)	+	AluY	SINE/Alu	2	298	(13)	1798304
11	17.5	1.9	9.1	chr19	1208019	1208072	(57409544)	+	(CTGCC)n	Simple_repeat	1	55	(0)	1798411
2316	7.2	0.0	6.3	chr19	1240660	1240991	(57376625)	C	AluSx1	SINE/Alu	(1)	311	1	1798450
1654	13.1	4.5	1.9	chr19	1270486	1270744	(57346872)	+	AluJo	SINE/Alu	1	266	(46)	1798485
205	13.9	2.7	0.0	chr19	1311195	1311230	(57306386)	C	MIR1_Amn	SINE/MIR	(80)	150	114	1798542
15	5.5	0.0	0.0	chr19	1311233	1311251	(57306365)	+	(C)n	Simple_repeat	1	19	(0)	1798543
183	30.3	3.8	3.8	chr19	1311470	1311548	(57306068)	C	L2c	LINE/L2	(20)	3367	3289	1798544
180	23.9	1.4	14.5	chr19	1316764	1316846	(57300770)	+	MIR	SINE/MIR	76	147	(115)	1798558
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
2654	4.9	0.0	0.0	chr19	1436069	1436375	(57181241)	+	AluSp	SINE/Alu	1	307	(6)	1798773
14	8.2	0.0	3.6	chr19	1446250	1446277	(57171339)	+	(GGGGC)n	Simple_repeat	1	28	(0)	1798793
14	15.5	0.0	0.0	chr19	1482863	1482891	(57134725)	+	(GCCCC)n	Simple_repeat	1	29	(0)	1798847
228	17.1	4.5	0.0	chr19	1493605	1493659	(57123957)	+	MIRb	SINE/MIR	194	260	(8)	1798871
22	0.0	0.0	0.0	chr19	1493709	1493732	(57123884)	+	(AC)n	Simple_repeat	1	24	(0)	1798872
1655	16.8	6.1	1.8	chr19	1590348	1590627	(57026989)	+	AluJb	SINE/Alu	9	301	(11)	1799089
923	15.2	2.7	11.1	chr19	1590628	1590661	(57026955)	+	L1MB7	LINE/L1	6133	6165	(19)	1799087
1905	8.2	7.9	0.0	chr19	1593281	1593547	(57024069)	C	AluSx	SINE/Alu	(18)	294	5	1799094
244	31.8	7.5	5.7	chr19	1593548	1593733	(57023883)	+	L2	LINE/L2	2613	2802	(617)	1799093
387	25.9	16.1	0.0	chr19	1593838	1593999	(57023617)	C	MLT1E2	LTR/ERVL-MaLR	(407)	220	28	1799095
16	22.0	0.0	3.9	chr19	1605463	1605513	(57012103)	+	(GCGCGG)n	Simple_repeat	1	51	(0)	1799129
15	13.9	0.0	0.0	chr19	1605494	1605517	(57012099)	+	(G)n	Simple_repeat	1	24	(0)	1799130
12	0.0	0.0	5.0	chr19	1652412	1652431	(56965185)	+	(GGC)n	Simple_repeat	1	20	(0)	1799197
12	22.9	0.0	4.3	chr19	1747376	1747417	(56870199)	+	(CCGC)n	Simple_repeat	1	40	(0)	1799449
38	2.8	0.0	0.0	chr19	1747418	1747454	(56870162)	+	(CA)n	Simple_repeat	1	37	(0)	1799450
180	24.6	5.0	1.7	chr19	1747689	1747746	(56869870)	C	L2b	LINE/L2	(0)	3375	3316	1799451
249	21.0	3.6	8.0	chr19	1747795	1747882	(56869734)	+	L2c	LINE/L2	3066	3149	(238)	1799452
16	0.0	3.9	3.7	chr19	1795753	1795778	(56821838)	+	(CTC)n	Simple_repeat	1	27	(0)	1799531
74	0.0	0.0	0.0	chr19	1795785	1795847	(56821769)	+	(AC)n	Simple_repeat	1	63	(0)	1799532
15	34.1	1.3	1.9	chr19	1812350	1812451	(56805165)	+	G-rich	Low_complexity	1	101	(0)	1799565
12	16.5	0.0	0.0	chr19	1854110	1854136	(56763480)	+	(CCACC)n	Simple_repeat	1	27	(0)	1799629
13	20.6	2.4	2.4	chr19	1854137	1854177	(56763439)	+	G-rich	Low_complexity	1	42	(0)	1799630
829	23.5	2.3	2.7	chr19	1859796	1860014	(56757602)	+	MER20	DNA/hAT-Charlie	2	219	(0)	1799634
20	16.1	11.8	0.0	chr19	1885296	1885371	(56732245)	+	(GCCCGC)n	Simple_repeat	1	85	(0)	1799665
314	24.5	0.0	3.0	chr19	1885659	1885759	(56731857)	+	MER96B	DNA/hAT-Tip100	3	100	(317)	1799666
2171	11.0	0.7	0.0	chr19	1885764	1886054	(56731562)	C	AluSx1	SINE/Alu	(19)	293	1	1799667
525	23.0	2.3	8.7	chr19	1929067	1929295	(56688321)	+	MLT1C	LTR/ERVL-MaLR	176	389	(1)	1799773
1153	8.6	3.8	0.0	chr19	1929574	1929725	(56687891)	+	AluSq2	SINE/Alu	155	312	(1)	1799777
12	11.2	4.3	8.3	chr19	1930116	1930161	(56687455)	+	G-rich	Low_complexity	1	48	(0)	1799778
2284	10.8	0.0	0.7	chr19	2026546	2026851	(56590765)	+	AluSx	SINE/Alu	1	304	(8)	1799986
198	27.0	11.0	2.2	chr19	2026894	2026984	(56590632)	C	MIR1_Amn	SINE/MIR	(79)	151	52	1799987
38	5.5	5.3	0.0	chr19	2027117	2027173	(56590443)	+	(CA)n	Simple_repeat	1	60	(0)	1799988
2142	10.1	0.0	0.4	chr19	2027201	2027478	(56590138)	+	AluSx1	SINE/Alu	1	277	(35)	1799989
32	12.3	1.9	0.0	chr19	2049894	2049946	(56567670)	+	(AC)n	Simple_repeat	1	54	(0)	1800033
13	12.1	0.0	3.5	chr19	2050096	2050124	(56567492)	+	(CCCTG)n	Simple_repeat	1	29	(0)	1800034
18	11.1	5.1	0.0	chr19	2056871	2056909	(56560707)	+	(CCCAGCA)n	Simple_repeat	1	41	(0)	1800051
1915	12.7	5.2	0.0	chr19	2058828	2059118	(56558498)	C	AluSx	SINE/Alu	(4)	308	2	1800053
797	12.4	2.5	2.5	chr19	2059120	2059240	(56558376)	C	AluJb	SINE/Alu	(167)	145	25	1800054
2305	8.6	2.9	0.3	chr19	2095740	2096043	(56521573)	C	AluSx	SINE/Alu	(0)	312	1	1800144
2290	8.7	0.0	0.0	chr19	2163085	2163373	(56454243)	C	AluSx1	SINE/Alu	(23)	289	1	1800270
957	6.9	0.0	0.0	chr19	2163376	2163491	(56454125)	C	AluSp	SINE/Alu	(197)	116	1	1800271
21	19.8	0.0	0.0	chr19	2163757	2163802	(56453814)	+	(CGTG)n	Simple_repeat	1	46	(0)	1800272
17	27.5	1.3	4.0	chr19	2163789	2163863	(56453753)	+	G-rich	Low_complexity	1	76	(0)	1800273
20	22.1	5.9	0.0	chr19	2164004	2164030	(56453586)	+	(GAGGCC)n	Simple_repeat	1	56	(16)	1800274
20	12.6	0.0	0.0	chr19	2164031	2164065	(56453551)	+	(GCG)n	Simple_repeat	1	35	(0)	1800275
20	22.1	5.9	0.0	chr19	2164066	2164071	(56453545)	+	(GAGGCC)n	Simple_repeat	57	72	(0)	1800274
20	23.1	1.4	4.2	chr19	2164084	2164154	(56453462)	+	(CCGC)n	Simple_repeat	1	72	(0)	1800276
13	12.6	0.0	3.6	chr19	2188435	2188462	(56429154)	+	GA-rich	Low_complexity	1	28	(0)	1800334
16	19.2	0.0	0.0	chr19	2188469	2188498	(56429118)	+	(C)n	Simple_repeat	1	30	(0)	1800335
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
1083	13.4	0.6	0.0	chr19	2416094	2416250	(56201366)	+	AluJb	SINE/Alu	138	295	(17)	1800759
194	25.0	3.5	0.0	chr19	2416288	2416343	(56201273)	C	MIRc	SINE/MIR	(128)	140	83	1800760
203	22.0	0.0	2.0	chr19	2457086	2457136	(56160480)	+	MIR	SINE/MIR	24	73	(189)	1800829
256	10.8	1.5	13.3	chr19	2457203	2457230	(56160386)	+	L1MB7	LINE/L1	5879	5902	(282)	1800830
1858	11.9	7.5	2.7	chr19	2457231	2457523	(56160093)	+	AluSz	SINE/Alu	1	308	(4)	1800831
256	10.8	1.5	13.3	chr19	2457524	2457569	(56160047)	+	L1MB7	LINE/L1	5903	5944	(240)	1800830
1062	22.4	14.5	8.0	chr19	2457570	2457758	(56159858)	C	LTR54B	LTR/ERV1	(2)	496	293	1800832
547	24.9	2.8	6.8	chr19	2579780	2579969	(56037647)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	286	1801151
2370	11.0	0.0	0.0	chr19	2580282	2580589	(56037027)	C	AluSx	SINE/Alu	(3)	309	2	1801152
2319	10.3	0.0	0.0	chr19	2580764	2581064	(56036552)	C	AluSx	SINE/Alu	(11)	301	1	1801154
441	25.6	6.2	1.8	chr19	2631140	2631215	(55986401)	C	MIR	SINE/MIR	(54)	208	116	1801289
412	30.3	7.6	0.5	chr19	2631216	2631403	(55986213)	+	MIRb	SINE/MIR	2	204	(64)	1801290
513	26.5	0.0	2.9	chr19	2631446	2631585	(55986031)	C	MER58A	DNA/hAT-Charlie	(80)	144	9	1801291
1201	21.9	14.0	0.9	chr19	2949859	2950319	(55667297)	+	LTR65	LTR/ERV1	1	524	(145)	1801984
277	34.0	7.0	4.0	chr19	2977758	2978005	(55639611)	+	L2b	LINE/L2	3048	3303	(72)	1802073
241	25.0	0.0	3.8	chr19	3022644	3022722	(55594894)	C	L1M5	LINE/L1	(638)	5806	5731	1802196
1006	22.8	2.7	0.9	chr19	3022793	3023009	(55594607)	C	MER58A	DNA/hAT-Charlie	(3)	221	1	1802197
2118	9.6	5.7	0.0	chr19	3023055	3023335	(55594281)	C	AluSx4	SINE/Alu	(12)	298	1	1802198
31	23.2	3.2	4.6	chr19	3029117	3029242	(55588374)	+	(GCGGCG)n	Simple_repeat	1	130	(0)	1802206
249	33.5	7.7	0.6	chr19	3029544	3029711	(55587905)	C	L2b	LINE/L2	(156)	3219	3039	1802207
216	33.6	7.3	3.5	chr19	3029743	3029805	(55587811)	+	MIRb	SINE/MIR	115	177	(91)	1802208
1922	12.5	1.4	3.4	chr19	3029806	3030101	(55587515)	C	AluJr	SINE/Alu	(21)	291	2	1802209
276	22.6	1.4	0.9	chr19	3036000	3036071	(55581545)	C	MIR1_Amn	SINE/MIR	(99)	169	103	1802226
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
12	9.5	2.4	9.5	chr19	3061828	3061868	(55555748)	+	(CCCGAGG)n	Simple_repeat	1	42	(0)	1802289
196	22.2	0.0	0.0	chr19	3062711	3062746	(55554870)	+	MIR3	SINE/MIR	114	149	(59)	1802286
227	31.9	1.1	5.0	chr19	3062801	3062899	(55554717)	+	MIRc	SINE/MIR	72	166	(102)	1802290
1040	29.7	5.4	4.1	chr19	3146579	3147223	(55470393)	+	L2a	LINE/L2	2603	3262	(164)	1802507
2459	7.6	0.0	0.3	chr19	3313753	3314053	(55303563)	+	AluSq	SINE/Alu	2	301	(12)	1802905
16	18.3	0.0	2.6	chr19	3314162	3314200	(55303416)	+	(GGTG)n	Simple_repeat	1	39	(0)	1802906
46	0.0	0.0	0.0	chr19	3314381	3314419	(55303197)	+	(CA)n	Simple_repeat	1	39	(0)	1802907
56	4.3	4.2	0.0	chr19	3314510	3314581	(55303035)	+	(CT)n	Simple_repeat	1	75	(0)	1802908
2283	10.5	0.3	0.0	chr19	3343234	3343539	(55274077)	+	AluSx1	SINE/Alu	1	307	(5)	1802996
220	26.7	4.8	0.0	chr19	3343563	3343622	(55273994)	+	L2b	LINE/L2	3311	3373	(2)	1802997
811	18.9	1.9	9.5	chr19	3343701	3343922	(55273694)	C	MER20	DNA/hAT-Charlie	(14)	205	1	1802998
239	26.3	4.8	4.8	chr19	3343926	3344029	(55273587)	C	MIRc	SINE/MIR	(99)	169	66	1802999
1097	24.7	4.2	4.4	chr19	3345242	3345718	(55271898)	+	L2a	LINE/L2	2672	3140	(286)	1803003
2059	11.8	1.7	0.3	chr19	3345720	3346008	(55271608)	+	AluSx1	SINE/Alu	1	293	(19)	1803004
663	24.5	2.5	1.9	chr19	3357487	3357644	(55259972)	+	MIR	SINE/MIR	70	228	(34)	1803045
16	16.2	0.0	0.0	chr19	3357840	3357867	(55259749)	+	G-rich	Low_complexity	1	28	(0)	1803046
17	23.2	1.7	3.3	chr19	3359550	3359608	(55258008)	+	(CCCT)n	Simple_repeat	1	60	(0)	1803050
12	13.6	0.0	7.9	chr19	3359975	3360012	(55257604)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	1803051
16	12.1	0.0	3.5	chr19	3361848	3361876	(55255740)	+	(AC)n	Simple_repeat	1	29	(0)	1803054
26	34.4	0.9	1.7	chr19	3361901	3362016	(55255600)	+	(CA)n	Simple_repeat	1	117	(0)	1803055
15	19.6	0.0	0.0	chr19	3366078	3366106	(55251510)	+	G-rich	Low_complexity	1	29	(0)	1803066
251	31.6	10.9	0.0	chr19	3367944	3368057	(55249559)	+	MIR3	SINE/MIR	9	136	(72)	1803072
130	29.7	2.1	2.4	chr19	3368949	3369416	(55248200)	+	(TCTCTC)n	Simple_repeat	1	467	(0)	1803077
15	17.5	0.0	0.0	chr19	3369870	3369901	(55247715)	+	(TCGT)n	Simple_repeat	1	32	(0)	1803078
13	12.8	5.9	0.0	chr19	3468572	3468605	(55149011)	+	G-rich	Low_complexity	1	36	(0)	1803362
15	7.8	3.7	0.0	chr19	3468866	3468892	(55148724)	+	(CCT)n	Simple_repeat	1	28	(0)	1803363
313	24.2	6.9	3.9	chr19	3471903	3472031	(55145585)	C	MIR	SINE/MIR	(55)	207	77	1803372
17	15.0	4.3	2.1	chr19	3572900	3572945	(55044671)	+	G-rich	Low_complexity	1	48	(0)	1803565
479	26.9	7.9	0.0	chr19	3618189	3618374	(54999242)	+	MER20	DNA/hAT-Charlie	5	206	(13)	1803655
185	25.2	8.0	3.8	chr19	3643648	3643779	(54973837)	+	L2b	LINE/L2	2923	3060	(359)	1803699
16	12.1	0.0	0.0	chr19	3699410	3699437	(54918179)	+	(CGCC)n	Simple_repeat	1	28	(0)	1803806
699	6.5	0.0	8.3	chr19	3987134	3987241	(54630375)	+	AluSc	SINE/Alu	205	303	(6)	1804479
2230	9.3	0.0	2.0	chr19	3987257	3987557	(54630059)	+	AluSx1	SINE/Alu	9	303	(9)	1804480
807	17.6	2.3	0.8	chr19	4006816	4006946	(54610670)	+	AluJo	SINE/Alu	2	134	(178)	1804553
16	14.9	9.5	2.9	chr19	4067107	4067169	(54550447)	+	(CCGCG)n	Simple_repeat	1	69	(0)	1804657
18	4.7	0.0	0.0	chr19	4078265	4078286	(54539330)	+	(G)n	Simple_repeat	1	22	(0)	1804696
207	25.2	12.8	12.3	chr19	4078289	4078451	(54539165)	+	MIRc	SINE/MIR	35	198	(70)	1804697
226	20.9	3.1	3.5	chr19	4145112	4145754	(54471862)	+	GA-rich	Low_complexity	1	663	(0)	1804864
14	20.6	6.2	5.8	chr19	4198298	4198378	(54419238)	+	G-rich	Low_complexity	1	86	(0)	1805013
14	8.3	0.0	3.6	chr19	4198577	4198604	(54419012)	+	(CCTCC)n	Simple_repeat	1	28	(0)	1805014
2328	10.5	0.3	0.0	chr19	4352404	4352707	(54264909)	+	AluSx	SINE/Alu	2	306	(6)	1805425
18	18.9	2.4	0.0	chr19	4352911	4352952	(54264664)	+	GA-rich	Low_complexity	1	43	(0)	1805426
187	33.7	4.7	1.9	chr19	4353095	4353197	(54264419)	C	L2b	LINE/L2	(966)	2453	2348	1805409
211	33.1	3.7	0.0	chr19	4375256	4375342	(54242274)	C	MIR1_Amn	SINE/MIR	(49)	159	70	1805459
21	27.1	4.2	2.0	chr19	4472226	4472321	(54145295)	+	(CTCCCG)n	Simple_repeat	1	100	(0)	1805675
21	18.3	1.4	5.7	chr19	4472442	4472510	(54145106)	+	G-rich	Low_complexity	1	70	(0)	1805676
817	26.3	6.6	1.2	chr19	4557686	4558016	(54059600)	+	L2	LINE/L2	2658	3007	(412)	1805855
15	8.8	0.0	0.0	chr19	4558398	4558421	(54059195)	+	(CAG)n	Simple_repeat	1	24	(0)	1805856
412	23.2	5.8	2.2	chr19	4585334	4585491	(54032125)	C	MIRb	SINE/MIR	(61)	201	46	1805926
976	11.4	0.0	0.0	chr19	4638809	4638939	(53978677)	C	FLAM_C	SINE/Alu	(10)	133	3	1806087
200	33.3	0.0	4.0	chr19	4638943	4639017	(53978599)	C	MER5A	DNA/hAT-Charlie	(115)	74	3	1806088
12	24.3	0.0	8.1	chr19	4639434	4639495	(53978121)	+	G-rich	Low_complexity	1	62	(0)	1806089
30	15.0	1.4	4.1	chr19	4639503	4639574	(53978042)	+	(CCGGCC)n	Simple_repeat	1	73	(0)	1806090
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
14	21.4	0.0	4.3	chr19	4831623	4831669	(53785947)	+	G-rich	Low_complexity	1	47	(0)	1806600
15	13.7	0.0	0.0	chr19	5128848	5128871	(53488745)	+	(G)n	Simple_repeat	1	24	(0)	1807230
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
218	28.5	18.8	0.8	chr19	5309367	5309497	(53308119)	C	MIR3	SINE/MIR	(34)	234	69	1807622
1671	26.5	5.4	2.1	chr19	5309611	5310306	(53307310)	+	L2a	LINE/L2	2480	3215	(211)	1807623
19	16.0	4.2	6.7	chr19	5340732	5340803	(53276813)	+	(CGCGCGG)n	Simple_repeat	1	75	(0)	1807705
18	27.3	0.0	3.1	chr19	5340835	5340899	(53276717)	+	(CCG)n	Simple_repeat	1	65	(0)	1807706
19	21.2	0.0	0.0	chr19	5341053	5341096	(53276520)	+	(GGC)n	Simple_repeat	1	44	(0)	1807707
2421	7.7	0.0	0.3	chr19	5522709	5523005	(53094611)	+	AluY	SINE/Alu	1	296	(15)	1808236
817	26.9	3.9	4.1	chr19	5523006	5523478	(53094138)	+	L2b	LINE/L2	2702	3223	(164)	1808235
18	23.3	0.0	0.0	chr19	5523489	5523528	(53094088)	+	A-rich	Low_complexity	1	40	(0)	1808237
198	21.1	9.0	5.3	chr19	5523576	5523650	(53093966)	C	L3	LINE/CR1	(109)	3990	3913	1808238
13	0.0	0.0	0.0	chr19	5805941	5805957	(52811659)	+	(CGC)n	Simple_repeat	1	17	(0)	1808890
16	9.9	0.0	5.6	chr19	6065982	6066017	(52551599)	+	G-rich	Low_complexity	1	36	(0)	1809353
2162	11.1	1.6	0.0	chr19	6361040	6361336	(52256280)	+	AluSx3	SINE/Alu	1	302	(9)	1810058
28	28.8	0.0	3.7	chr19	6424311	6424418	(52193198)	+	(GCCCCC)n	Simple_repeat	1	108	(0)	1810201
25	23.7	0.0	1.6	chr19	6424368	6424428	(52193188)	+	(GC)n	Simple_repeat	1	61	(0)	1810202
171	22.6	0.0	0.0	chr19	6532267	6532635	(52084981)	+	(GTGTGT)n	Simple_repeat	1	369	(0)	1810500
3905	11.4	3.2	3.3	chr19	6571977	6572253	(52045363)	C	L1M1	LINE/L1	(4303)	3262	2989	1810605
2512	20.6	2.2	1.4	chr19	6572245	6572737	(52044879)	C	L1M1	LINE/L1	(7054)	511	15	1810605
261	4.9	0.0	0.8	chr19	6572822	6572863	(52044753)	+	HUERS-P3-int	LTR/ERV1	8833	8860	(59)	1810607
981	25.9	9.5	2.2	chr19	6771847	6772454	(51845162)	C	L2a	LINE/L2	(126)	3300	2631	1811103
13	25.6	2.1	2.0	chr19	6772623	6772670	(51844946)	+	(CTC)n	Simple_repeat	1	49	(0)	1811109
2218	6.3	4.6	0.0	chr19	6863212	6863482	(51754134)	C	AluSq2	SINE/Alu	(29)	284	1	1811398
1352	18.6	4.3	0.1	chr19	7562695	7562974	(51054642)	C	L1MC2	LINE/L1	(514)	5830	5540	1813209
205	39.7	2.3	0.8	chr19	7563149	7563275	(51054341)	+	L2c	LINE/L2	2911	3039	(348)	1813212
1794	17.2	0.0	2.4	chr19	7563422	7563443	(51054173)	C	AluJb	SINE/Alu	(6)	306	285	1813213
65	1.6	0.0	0.0	chr19	7563444	7563505	(51054111)	+	(TTA)n	Simple_repeat	1	62	(0)	1813214
1794	17.2	0.0	2.4	chr19	7563506	7563779	(51053837)	C	AluJb	SINE/Alu	(28)	284	17	1813213
16	23.7	0.0	3.8	chr19	7888424	7888476	(50729140)	+	G-rich	Low_complexity	1	53	(0)	1813921
1992	13.3	3.4	0.0	chr19	7889171	7889456	(50728160)	+	AluSx	SINE/Alu	2	297	(15)	1813922
18	19.5	2.0	2.0	chr19	7903905	7903953	(50713663)	+	(GGC)n	Simple_repeat	1	50	(0)	1813951
17	13.4	7.8	1.8	chr19	7904076	7904126	(50713490)	+	G-rich	Low_complexity	1	55	(0)	1813952
13	26.6	2.9	4.3	chr19	7904129	7904196	(50713420)	+	(GCCCC)n	Simple_repeat	1	70	(0)	1813953
36	21.4	0.6	5.6	chr19	8209047	8209140	(50408476)	+	G-rich	Low_complexity	1	89	(0)	1814706
31	22.6	2.1	7.5	chr19	8209176	8209318	(50408298)	+	(CCCCG)n	Simple_repeat	1	146	(0)	1814707
11	18.8	4.3	4.2	chr19	8209445	8209490	(50408126)	+	(CCCCGGC)n	Simple_repeat	1	48	(0)	1814708
12	10.1	8.3	5.8	chr19	8209546	8209593	(50408023)	+	(CGGCCC)n	Simple_repeat	1	52	(0)	1814709
183	25.9	6.5	3.3	chr19	8324027	8324086	(50293530)	+	MIR3	SINE/MIR	75	136	(72)	1815018
896	18.1	0.6	1.2	chr19	8324142	8324301	(50293315)	+	AluJo	SINE/Alu	137	295	(17)	1815019
1949	7.5	0.0	0.0	chr19	8389534	8389773	(50227843)	C	AluSg	SINE/Alu	(69)	241	2	1815197
231	19.0	6.9	3.5	chr19	8389784	8389868	(50227748)	C	MIR1_Amn	SINE/MIR	(78)	184	97	1815198
2535	5.5	0.0	0.3	chr19	8412533	8412840	(50204776)	C	AluY	SINE/Alu	(0)	311	5	1815248
1454	11.2	0.0	8.7	chr19	8412841	8412976	(50204640)	C	AluJr	SINE/Alu	(186)	126	1	1815247
246	8.8	4.4	4.4	chr19	8611711	8611778	(50005838)	C	MIRc	SINE/MIR	(91)	177	101	1815708
225	32.9	2.3	1.2	chr19	8612011	8612096	(50005520)	+	MIRb	SINE/MIR	110	196	(72)	1815709
734	14.9	0.0	8.1	chr19	9324511	9324658	(49292958)	+	FLAM_C	SINE/Alu	1	136	(7)	1817238
2101	9.4	1.4	2.0	chr19	9582934	9583232	(49034384)	+	AluSx3	SINE/Alu	1	297	(14)	1817696
1191	11.2	0.6	0.0	chr19	9583330	9583490	(49034126)	C	AluSq2	SINE/Alu	(16)	297	136	1817697
2524	6.7	0.0	0.6	chr19	9583492	9583804	(49033812)	C	AluYk2	SINE/Alu	(0)	311	1	1817698
7203	7.1	0.7	0.7	chr19	9790952	9791594	(48826022)	C	LTR13A	LTR/ERVK	(322)	644	1	1818114
1523	19.1	1.0	0.7	chr19	9793373	9793670	(48823946)	C	AluJo	SINE/Alu	(13)	299	1	1818116
358	28.4	12.2	0.0	chr19	9858025	9858218	(48759398)	+	L2b	LINE/L2	2637	2857	(562)	1818274
814	32.2	4.8	2.7	chr19	9858222	9858626	(48758990)	+	L2b	LINE/L2	2962	3375	(0)	1818274
19	0.0	0.0	0.0	chr19	10062055	10062075	(48555541)	+	(GT)n	Simple_repeat	1	21	(0)	1818797
362	24.7	13.8	2.4	chr19	10085781	10085974	(48531642)	C	MIR	SINE/MIR	(18)	244	32	1818870
15	4.7	0.0	0.0	chr19	10195192	10195213	(48422403)	+	(CATT)n	Simple_repeat	1	22	(0)	1819117
418	27.5	6.2	0.8	chr19	10195259	10195400	(48422216)	+	MIRb	SINE/MIR	34	187	(43)	1819118
1662	16.1	0.0	10.2	chr19	10195510	10195844	(48421772)	+	AluJb	SINE/Alu	12	312	(0)	1819119
2378	4.5	0.7	5.2	chr19	10297311	10297620	(48319996)	+	AluY	SINE/Alu	3	298	(13)	1819387
1754	10.9	5.9	7.4	chr19	10297629	10297770	(48319846)	+	AluSz	SINE/Alu	1	133	(179)	1819388
2374	10.3	0.3	0.0	chr19	10297771	10298080	(48319536)	+	AluSc8	SINE/Alu	1	311	(0)	1819389
14	15.4	5.6	0.0	chr19	10300071	10300106	(48317510)	+	(CCT)n	Simple_repeat	1	38	(0)	1819394
2214	11.1	0.0	0.0	chr19	10304124	10304412	(48313204)	C	AluSx	SINE/Alu	(22)	290	2	1819409
939	12.8	0.0	0.8	chr19	10304427	10304559	(48313057)	C	AluJr	SINE/Alu	(179)	133	2	1819410
18	18.9	2.3	2.2	chr19	10304561	10304604	(48313012)	+	(TG)n	Simple_repeat	1	45	(0)	1819411
17	16.4	3.2	6.2	chr19	10304605	10304612	(48313004)	+	(TGTGTC)n	Simple_repeat	3	54	(0)	1819412
14	23.0	0.0	0.0	chr19	10305487	10305523	(48312093)	+	A-rich	Low_complexity	1	37	(0)	1819413
52	2.1	0.0	0.0	chr19	10404178	10404226	(48213390)	+	(CA)n	Simple_repeat	1	49	(0)	1819650
22	0.0	0.0	0.0	chr19	10419057	10419080	(48198536)	+	(T)n	Simple_repeat	1	24	(0)	1819690
13	8.5	4.0	0.0	chr19	10419324	10419348	(48198268)	+	(CGCT)n	Simple_repeat	1	26	(0)	1819691
463	23.0	1.0	1.0	chr19	10451712	10451812	(48165804)	C	MER91C	DNA/hAT-Tip100	(0)	140	40	1819782
49	0.0	0.0	0.0	chr19	10452021	10452062	(48165554)	+	(GT)n	Simple_repeat	1	42	(0)	1819783
341	17.4	6.7	7.5	chr19	10492329	10492434	(48125182)	+	MIR	SINE/MIR	93	197	(65)	1819894
2393	5.6	0.0	2.6	chr19	10492438	10492742	(48124874)	+	AluSx4	SINE/Alu	2	298	(12)	1819895
710	25.8	18.5	3.6	chr19	10551720	10551863	(48065753)	+	L2a	LINE/L2	3274	3422	(4)	1820076
14	13.0	0.0	7.7	chr19	10654426	10654464	(47963152)	+	(CGG)n	Simple_repeat	1	39	(0)	1820366
12	22.0	4.8	0.0	chr19	10654506	10654547	(47963069)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	1820367
12	5.5	0.0	0.0	chr19	10654716	10654734	(47962882)	+	(GGC)n	Simple_repeat	1	19	(0)	1820368
14	27.8	1.9	0.0	chr19	10928174	10928225	(47689391)	+	G-rich	Low_complexity	1	53	(0)	1821014
36	28.3	3.0	4.8	chr19	10960847	10961046	(47656570)	+	G-rich	Low_complexity	1	206	(0)	1821124
15	14.0	4.9	2.3	chr19	11197014	11197066	(47420550)	+	(CCCAG)n	Simple_repeat	1	54	(0)	1821707
14	16.7	2.9	0.0	chr19	11197889	11197922	(47419694)	+	G-rich	Low_complexity	1	35	(0)	1821708
418	19.9	0.0	0.0	chr19	11198073	11198160	(47419456)	+	MIR	SINE/MIR	105	191	(71)	1821709
863	14.2	0.0	0.0	chr19	11198312	11198431	(47419185)	+	AluJo	SINE/Alu	6	125	(187)	1821710
1625	29.4	5.8	1.2	chr19	11460082	11460819	(47156797)	+	L2a	LINE/L2	2484	3279	(147)	1822387
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
196	39.5	0.0	0.0	chr19	11552182	11552257	(47065359)	C	MIR	SINE/MIR	(74)	188	113	1822631
1717	13.1	10.0	2.6	chr19	12035850	12036162	(46581454)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1823622
2288	9.3	0.0	0.0	chr19	12671703	12671993	(45945623)	C	AluSc	SINE/Alu	(16)	293	3	1824965
753	16.0	7.0	8.2	chr19	12671994	12672182	(45945434)	C	Tigger2a	DNA/TcMar-Tigger	(241)	193	2	1824963
2337	9.0	0.3	0.0	chr19	12672327	12672625	(45944991)	+	AluSp	SINE/Alu	1	300	(13)	1824966
1834	16.8	0.3	2.0	chr19	12732912	12733208	(45884408)	C	AluJo	SINE/Alu	(20)	292	1	1825102
375	26.0	12.1	2.4	chr19	12733213	12733338	(45884278)	C	MIRc	SINE/MIR	(120)	148	9	1825103
1163	13.5	4.2	5.0	chr19	12733412	12733630	(45883986)	C	MER20	DNA/hAT-Charlie	(0)	219	3	1825104
313	29.9	5.6	0.8	chr19	12733634	12733751	(45883865)	C	MIRb	SINE/MIR	(20)	248	125	1825105
370	28.2	2.6	0.9	chr19	12733766	12733876	(45883740)	+	L2a	LINE/L2	3312	3424	(2)	1825106
1912	12.6	1.0	3.3	chr19	12777193	12777494	(45840122)	+	AluJb	SINE/Alu	2	296	(16)	1825194
444	31.6	1.3	3.8	chr19	12777855	12778012	(45839604)	C	MIRb	SINE/MIR	(0)	268	115	1825195
13	23.9	3.1	4.5	chr19	12783339	12783402	(45834214)	+	(CCCCCAG)n	Simple_repeat	1	66	(0)	1825204
14	17.2	5.1	0.0	chr19	12788700	12788738	(45828878)	+	(CTGCC)n	Simple_repeat	1	41	(0)	1825214
35	16.1	1.2	3.6	chr19	12789151	12789174	(45828442)	+	(CAGAGA)n	Simple_repeat	1	81	(0)	1825215
40	9.5	0.0	0.0	chr19	12789175	12789230	(45828386)	+	(GA)n	Simple_repeat	1	56	(0)	1825216
16	29.8	1.6	0.0	chr19	12806495	12806555	(45811061)	+	(GCAGCG)n	Simple_repeat	1	62	(0)	1825249
17	13.3	0.0	0.0	chr19	12825712	12825744	(45791872)	+	(GCCGCT)n	Simple_repeat	1	33	(0)	1825310
37	25.8	2.8	5.5	chr19	12838391	12838437	(45779179)	+	(CGC)n	Simple_repeat	1	56	(127)	1825335
15	11.6	0.0	0.0	chr19	12838438	12838465	(45779151)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1825336
37	25.8	2.8	5.5	chr19	12838466	12838568	(45779048)	+	(CGC)n	Simple_repeat	57	183	(0)	1825335
1385	14.2	2.7	1.8	chr19	12886606	12886823	(45730793)	C	AluJb	SINE/Alu	(6)	306	87	1825451
235	8.3	3.6	2.7	chr19	12937925	12937986	(45679630)	C	MIRb	SINE/MIR	(145)	123	60	1825580
335	19.7	1.5	0.4	chr19	12944746	12944833	(45672783)	C	AluY	SINE/Alu	(4)	297	224	1825592
2390	9.1	0.0	1.0	chr19	12964618	12964925	(45652691)	C	AluY	SINE/Alu	(2)	309	5	1825649
1003	23.8	10.4	4.3	chr19	12965023	12965417	(45652199)	C	L2	LINE/L2	(537)	2882	2461	1825650
391	30.8	14.4	0.8	chr19	12965786	12965915	(45651701)	+	L2a	LINE/L2	3115	3268	(158)	1825651
1727	12.1	6.8	4.9	chr19	12965916	12966091	(45651525)	C	AluSz	SINE/Alu	(1)	311	144	1825652
2310	7.9	1.4	0.0	chr19	12966092	12966381	(45651235)	C	AluSp	SINE/Alu	(19)	294	1	1825653
15	7.2	3.2	3.1	chr19	12996510	12996540	(45621076)	+	(GGAGG)n	Simple_repeat	1	32	(0)	1825734
17	4.9	0.0	0.0	chr19	13018331	13018351	(45599265)	+	(G)n	Simple_repeat	1	21	(0)	1825760
14	15.2	2.4	4.8	chr19	13098243	13098283	(45519333)	+	(CACCC)n	Simple_repeat	1	42	(0)	1825871
15	13.3	2.8	2.7	chr19	13101276	13101311	(45516305)	+	G-rich	Low_complexity	1	37	(0)	1825873
19	12.8	0.0	0.0	chr19	13102443	13102476	(45515140)	+	(TGAA)n	Simple_repeat	1	34	(0)	1825875
15	5.5	0.0	0.0	chr19	13103809	13103827	(45513789)	+	(C)n	Simple_repeat	1	19	(0)	1825876
2160	13.0	0.0	0.0	chr19	13103915	13104221	(45513395)	+	AluJb	SINE/Alu	1	307	(5)	1825877
26	21.7	1.0	6.2	chr19	13118791	13118886	(45498730)	+	G-rich	Low_complexity	1	97	(0)	1825910
12	7.5	6.7	3.1	chr19	13163845	13163874	(45453742)	+	(GCCCT)n	Simple_repeat	1	32	(0)	1826010
12	16.9	2.9	2.8	chr19	13164170	13164204	(45453412)	+	(CACCC)n	Simple_repeat	1	36	(0)	1826011
253	28.7	21.9	0.6	chr19	13225992	13226054	(45391562)	+	Zaphod2	DNA/hAT-Tip100	141	203	(3321)	1826187
404	23.1	9.0	0.0	chr19	13226066	13226156	(45391460)	+	MER91B	DNA/hAT-Tip100	91	190	(0)	1826189
18	14.7	0.0	0.0	chr19	13226254	13226283	(45391333)	+	(G)n	Simple_repeat	1	30	(0)	1826190
498	26.1	4.0	6.9	chr19	13262455	13262693	(45354923)	C	MER91B	DNA/hAT-Tip100	(3328)	196	1	1826284
550	19.1	16.7	9.8	chr19	13282563	13282777	(45334839)	+	MIRb	SINE/MIR	23	255	(13)	1826325
14	7.2	0.0	8.6	chr19	13842976	13843010	(44774606)	+	G-rich	Low_complexity	1	35	(0)	1827937
305	25.0	0.0	4.0	chr19	13848264	13848338	(44769278)	+	MIR	SINE/MIR	106	177	(85)	1827946
746	13.6	0.9	0.9	chr19	13848354	13848463	(44769153)	+	AluJo	SINE/Alu	16	125	(187)	1827947
417	25.8	0.0	3.2	chr19	13848464	13848476	(44769140)	C	SVA_D	Retroposon/SVA	(1071)	314	196	1827948
2197	12.3	0.0	2.2	chr19	14027464	14027781	(44589835)	+	AluSx1	SINE/Alu	2	312	(0)	1828382
13	17.9	2.4	4.7	chr19	14057474	14057515	(44560101)	+	(CCT)n	Simple_repeat	1	43	(0)	1828465
13	26.0	2.9	4.2	chr19	14057598	14057626	(44559990)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	1828466
17	22.7	0.0	0.0	chr19	14057627	14057662	(44559954)	+	G-rich	Low_complexity	1	36	(0)	1828467
2326	8.4	0.0	0.0	chr19	14057826	14058121	(44559495)	+	AluSx1	SINE/Alu	1	296	(16)	1828468
2417	7.8	0.0	0.0	chr19	14060766	14061060	(44556556)	C	AluSx	SINE/Alu	(17)	295	1	1828472
12	29.7	1.8	1.8	chr19	14075209	14075263	(44542353)	+	(CCCGG)n	Simple_repeat	1	56	(0)	1828508
251	22.1	12.5	0.0	chr19	14075322	14075398	(44542218)	C	L2b	LINE/L2	(16)	3359	3272	1828509
2279	8.8	0.3	0.3	chr19	14075567	14075862	(44541754)	+	AluSz6	SINE/Alu	1	296	(16)	1828510
364	26.3	14.3	5.1	chr19	14082176	14082363	(44535253)	+	MIRb	SINE/MIR	26	243	(25)	1828530
16	30.2	2.5	2.4	chr19	14090333	14090412	(44527204)	+	(GCG)n	Simple_repeat	1	82	(0)	1828547
15	32.9	0.0	0.0	chr19	14090475	14090531	(44527085)	+	(CCC)n	Simple_repeat	1	57	(0)	1828548
18	0.0	0.0	0.0	chr19	14090582	14090601	(44527015)	+	(A)n	Simple_repeat	1	20	(0)	1828549
32	17.2	1.7	0.0	chr19	14090601	14090660	(44526956)	+	GA-rich	Low_complexity	1	61	(0)	1828550
15	21.8	0.0	0.0	chr19	14090671	14090707	(44526909)	+	(CACA)n	Simple_repeat	1	37	(0)	1828551
20	12.7	2.1	4.2	chr19	14090762	14090808	(44526808)	+	(CGC)n	Simple_repeat	1	48	(0)	1828552
25	19.9	3.2	0.0	chr19	14090823	14090885	(44526731)	+	(CTCC)n	Simple_repeat	1	65	(0)	1828553
15	12.9	2.8	2.7	chr19	14092697	14092732	(44524884)	+	(GTGG)n	Simple_repeat	1	37	(0)	1828555
196	35.9	3.2	5.2	chr19	14092734	14092830	(44524786)	+	X6A_LINE	LINE/CR1	763	857	(223)	1828556
18	12.6	0.0	0.0	chr19	14093062	14093088	(44524528)	+	(A)n	Simple_repeat	1	27	(0)	1828557
12	22.4	0.0	2.6	chr19	14151038	14151075	(44466541)	+	G-rich	Low_complexity	1	38	(0)	1828703
12	13.5	0.0	7.9	chr19	14151318	14151355	(44466261)	+	(CCCCCG)n	Simple_repeat	1	38	(0)	1828704
2654	4.6	0.0	0.0	chr19	14216623	14216929	(44400687)	+	AluY	SINE/Alu	5	311	(0)	1828848
1410	9.2	0.0	0.0	chr19	14216938	14217111	(44400505)	+	AluSz6	SINE/Alu	122	295	(17)	1828849
371	2.4	0.0	0.0	chr19	14217194	14217234	(44400382)	C	FLAM_A	SINE/Alu	(32)	110	70	1828850
529	25.6	11.1	0.0	chr19	14217235	14217410	(44400206)	+	L2a	LINE/L2	3228	3425	(1)	1828851
1897	15.8	0.0	2.3	chr19	14220993	14221178	(44396438)	+	AluJr	SINE/Alu	124	303	(9)	1828859
12	29.5	2.0	0.0	chr19	14249450	14249499	(44368117)	+	(CCCCCT)n	Simple_repeat	1	51	(0)	1828950
15	11.6	3.3	3.2	chr19	14249675	14249704	(44367912)	+	(CA)n	Simple_repeat	1	31	(0)	1828951
47	0.0	0.0	0.0	chr19	14381266	14381305	(44236311)	+	(GT)n	Simple_repeat	1	40	(0)	1829360
12	20.2	2.9	0.0	chr19	14480032	14480065	(44137551)	+	G-rich	Low_complexity	1	35	(0)	1829597
272	31.9	3.6	3.6	chr19	14505468	14505659	(44111957)	+	L2	LINE/L2	2659	2850	(569)	1829666
30	0.0	0.0	0.0	chr19	14505959	14505984	(44111632)	+	(TG)n	Simple_repeat	1	26	(0)	1829675
851	22.4	6.7	8.1	chr19	14506166	14506489	(44111127)	+	MLT1C	LTR/ERVL-MaLR	5	306	(161)	1829676
46	0.0	0.0	0.0	chr19	14776977	14777015	(43840601)	+	(CA)n	Simple_repeat	1	39	(0)	1830353
1564	17.9	1.5	2.6	chr19	15014914	15015186	(43602430)	+	AluJr	SINE/Alu	13	282	(30)	1830860
19	22.8	0.0	0.0	chr19	15631879	15631919	(42985697)	+	G-rich	Low_complexity	1	41	(0)	1832260
400	24.8	6.4	0.0	chr19	15631993	15632109	(42985507)	+	ORSL-2b	DNA/hAT-Tip100	30	154	(354)	1832261
2099	11.7	0.7	0.7	chr19	15868685	15868982	(42748634)	C	AluSz6	SINE/Alu	(12)	300	3	1832690
299	9.8	0.0	0.0	chr19	15869010	15869050	(42748566)	+	L1M	LINE/L1	5377	5417	(762)	1832691
13	21.6	0.0	2.8	chr19	15869051	15869086	(42748530)	+	G-rich	Low_complexity	1	36	(0)	1832692
639	34.3	5.6	2.7	chr19	15869221	15869514	(42748102)	C	LTR16C	LTR/ERVL	(186)	303	1	1832693
246	27.3	0.0	0.0	chr19	16075892	16075946	(42541670)	C	MIR	SINE/MIR	(99)	163	109	1833069
19	18.4	4.1	0.0	chr19	16076233	16076281	(42541335)	+	GA-rich	Low_complexity	1	51	(0)	1833070
209	15.2	0.0	0.0	chr19	16112219	16112251	(42505365)	C	MIRc	SINE/MIR	(120)	148	116	1833150
521	27.8	9.6	6.2	chr19	16112426	16112636	(42504980)	C	MIRb	SINE/MIR	(17)	251	33	1833151
16	13.7	0.0	0.0	chr19	16292983	16293007	(42324609)	+	(A)n	Simple_repeat	1	25	(0)	1833622
13	23.2	0.0	0.0	chr19	16293369	16293404	(42324212)	+	(TTTTCC)n	Simple_repeat	1	36	(0)	1833623
1522	15.1	4.1	8.8	chr19	16293935	16294239	(42323377)	C	AluJr	SINE/Alu	(22)	290	1	1833624
14	11.7	0.0	3.3	chr19	16572409	16572445	(42045171)	+	(GCGGG)n	Simple_repeat	1	35	(0)	1834225
15	18.4	5.4	0.0	chr19	16626920	16626956	(41990660)	+	(CA)n	Simple_repeat	1	39	(0)	1834290
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
2190	11.8	1.0	0.0	chr19	16888397	16888692	(41728924)	C	AluSx1	SINE/Alu	(13)	299	1	1835017
1855	9.9	1.6	0.0	chr19	17073757	17074009	(41543607)	+	AluSc8	SINE/Alu	35	291	(20)	1835434
31	0.0	0.0	0.0	chr19	17074011	17074039	(41543577)	+	(AAATAA)n	Simple_repeat	1	29	(0)	1835435
184	32.2	5.3	5.3	chr19	17074079	17074229	(41543387)	C	L2c	LINE/L2	(798)	2621	2471	1835433
37	30.3	4.2	2.0	chr19	17236074	17236266	(41381350)	+	GA-rich	Low_complexity	1	201	(0)	1835811
265	31.2	11.8	1.5	chr19	17243112	17243316	(41374300)	+	L2b	LINE/L2	3062	3290	(85)	1835829
207	29.5	2.5	0.0	chr19	17244811	17244888	(41372728)	C	MIR1_Amn	SINE/MIR	(76)	154	75	1835830
15	17.8	3.0	7.3	chr19	17246042	17246107	(41371509)	+	G-rich	Low_complexity	1	68	(0)	1835832
18	16.4	0.0	7.3	chr19	17246112	17246166	(41371450)	+	(CCCTCC)n	Simple_repeat	1	55	(0)	1835833
47	0.0	0.0	0.0	chr19	17246433	17246472	(41371144)	+	(AC)n	Simple_repeat	1	40	(0)	1835834
648	18.2	0.0	2.7	chr19	17279450	17279559	(41338057)	+	AluSc	SINE/Alu	203	309	(0)	1835920
235	24.6	1.5	1.5	chr19	17292052	17292117	(41325499)	C	MIR1_Amn	SINE/MIR	(80)	150	85	1835950
358	27.2	13.0	2.2	chr19	17303806	17303948	(41313668)	C	MIRb	SINE/MIR	(32)	176	7	1835983
784	15.3	0.0	0.8	chr19	17303976	17304099	(41313517)	C	AluJr	SINE/Alu	(188)	124	2	1835984
20	21.9	1.6	3.1	chr19	17399268	17399333	(41218283)	+	(GGAGTG)n	Simple_repeat	1	64	(0)	1836233
2406	8.5	0.0	2.5	chr19	17399484	17399802	(41217814)	+	AluSc8	SINE/Alu	1	311	(0)	1836234
20	4.3	0.0	0.0	chr19	17686294	17686317	(40931299)	+	(C)n	Simple_repeat	1	24	(0)	1837005
29	30.0	0.8	4.7	chr19	17688723	17688850	(40928766)	+	(TC)n	Simple_repeat	1	129	(0)	1837008
312	26.7	1.6	4.0	chr19	17688942	17689066	(40928550)	+	L2b	LINE/L2	3095	3216	(159)	1837009
326	26.4	5.4	0.3	chr19	17748691	17748826	(40868790)	+	MIR3	SINE/MIR	30	179	(89)	1837176
225	13.9	2.9	2.1	chr19	17751161	17751218	(40866398)	+	MIRb	SINE/MIR	102	169	(99)	1837184
22	12.9	0.0	2.3	chr19	17948097	17948140	(40669476)	+	(CCCCACC)n	Simple_repeat	1	44	(0)	1837698
18	17.5	0.0	0.0	chr19	18021269	18021301	(40596315)	+	(AC)n	Simple_repeat	1	33	(0)	1837869
242	24.6	3.3	4.6	chr19	18021749	18021893	(40595723)	C	MIR1_Amn	SINE/MIR	(15)	193	56	1837870
2066	10.2	6.3	0.0	chr19	18021942	18022224	(40595392)	C	AluSx1	SINE/Alu	(9)	303	2	1837871
331	28.0	1.8	4.5	chr19	18099535	18099646	(40517970)	C	MIR	SINE/MIR	(119)	143	35	1838101
279	23.7	1.1	2.7	chr19	18099682	18099786	(40517830)	C	L2b	LINE/L2	(313)	3113	3011	1838100
31	27.6	2.7	0.9	chr19	18153180	18153289	(40464327)	+	(GGC)n	Simple_repeat	1	113	(0)	1838227
18	20.0	1.8	3.6	chr19	18194901	18194955	(40422661)	+	(CCGCC)n	Simple_repeat	1	56	(0)	1838337
1992	13.0	3.4	0.0	chr19	18195264	18195547	(40422069)	+	AluSx	SINE/Alu	1	294	(18)	1838338
300	28.9	1.1	0.4	chr19	18208555	18208667	(40408949)	+	MIR	SINE/MIR	77	197	(33)	1838369
181	32.4	4.3	1.8	chr19	18224033	18224145	(40393471)	+	L2c	LINE/L2	3005	3120	(267)	1838407
16	13.4	0.0	2.9	chr19	18280050	18280084	(40337532)	+	A-rich	Low_complexity	1	35	(0)	1838526
12	25.0	6.3	1.5	chr19	18280608	18280670	(40336946)	+	(TGCGCT)n	Simple_repeat	1	67	(0)	1838527
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
254	18.9	3.6	0.0	chr19	18374325	18374377	(40243239)	+	L2b	LINE/L2	3302	3356	(19)	1838750
16	22.1	0.0	0.0	chr19	18374648	18374679	(40242937)	+	G-rich	Low_complexity	1	32	(0)	1838751
1042	17.0	0.0	6.0	chr19	18374903	18375102	(40242514)	+	AluJr	SINE/Alu	1	188	(124)	1838752
187	30.1	4.1	4.1	chr19	18385880	18385976	(40231640)	C	MIRb	SINE/MIR	(58)	210	114	1838787
226	30.4	6.8	0.1	chr19	18386645	18386754	(40230862)	C	MIR1_Amn	SINE/MIR	(83)	185	64	1838788
13	16.6	2.8	2.7	chr19	18389048	18389083	(40228533)	+	(TATT)n	Simple_repeat	1	37	(0)	1838794
31	11.4	0.0	0.0	chr19	18415571	18415619	(40201997)	+	(GGA)n	Simple_repeat	1	49	(0)	1838862
254	38.0	0.0	0.0	chr19	18415660	18415772	(40201844)	C	L2a	LINE/L2	(308)	3118	3006	1838863
364	27.8	6.5	0.9	chr19	18417204	18417319	(40200297)	+	L2c	LINE/L2	3260	3382	(5)	1838866
217	26.3	4.8	9.2	chr19	18417406	18417514	(40200102)	+	MIRc	SINE/MIR	23	126	(142)	1838867
17	20.0	0.0	0.0	chr19	18429057	18429096	(40188520)	+	(GGCGCAG)n	Simple_repeat	1	40	(0)	1838879
15	13.7	0.0	0.0	chr19	18429232	18429255	(40188361)	+	(G)n	Simple_repeat	1	24	(0)	1838880
13	27.5	2.1	0.0	chr19	18433954	18434001	(40183615)	+	(CCTCTC)n	Simple_repeat	1	49	(0)	1838884
71	1.6	0.0	0.0	chr19	18509594	18509658	(40107958)	+	(CA)n	Simple_repeat	1	65	(0)	1838982
2194	10.6	0.0	1.7	chr19	18510087	18510388	(40107228)	+	AluSz6	SINE/Alu	2	298	(14)	1838983
199	33.9	0.0	0.0	chr19	18520495	18520556	(40097060)	C	MIR1_Amn	SINE/MIR	(77)	153	92	1839002
12	21.8	2.7	0.0	chr19	18520692	18520728	(40096888)	+	(CCCCCA)n	Simple_repeat	1	38	(0)	1839003
13	15.9	5.7	0.0	chr19	18542984	18543018	(40074598)	+	(CCA)n	Simple_repeat	1	37	(0)	1839064
41	8.8	0.0	0.0	chr19	18543725	18543785	(40073831)	+	(GCGGGG)n	Simple_repeat	1	61	(0)	1839066
199	28.6	0.0	0.0	chr19	18543825	18543896	(40073720)	+	MIRc	SINE/MIR	96	168	(100)	1839067
196	20.0	5.2	0.0	chr19	18544021	18544075	(40073541)	C	MIR3	SINE/MIR	(69)	139	82	1839068
32	3.0	0.0	0.0	chr19	18683656	18683689	(39933927)	+	(GAG)n	Simple_repeat	1	34	(0)	1839368
30	20.6	1.0	5.9	chr19	18683858	18683957	(39933659)	+	G-rich	Low_complexity	1	101	(0)	1839369
553	26.6	16.1	0.9	chr19	18897297	18897743	(39719873)	+	L2a	LINE/L2	2580	3136	(251)	1839792
182	34.9	1.2	5.7	chr19	18941598	18941685	(39675931)	+	L2	LINE/L2	493	576	(2843)	1839876
18	27.2	4.9	1.2	chr19	19063996	19064076	(39553540)	+	(GGC)n	Simple_repeat	1	85	(0)	1840179
16	8.0	2.0	10.0	chr19	19138816	19138864	(39478752)	+	(ACTAAGT)n	Simple_repeat	1	50	(0)	1840332
515	19.9	7.8	0.0	chr19	19193273	19193403	(39424213)	C	MIRb	SINE/MIR	(102)	166	25	1840466
2367	8.8	1.0	0.0	chr19	19193409	19193713	(39423903)	C	AluSg4	SINE/Alu	(2)	308	1	1840467
183	38.3	12.9	4.1	chr19	21593106	21593323	(37024293)	C	L2b	LINE/L2	(3)	3372	3133	1844288
1469	31.8	2.1	1.4	chr19	21593331	21593853	(37023763)	C	BSR/Beta	Satellite	(27)	526	1	1844289
780	25.4	1.7	5.1	chr19	21593943	21595681	(37021935)	C	BSR/Beta	Satellite	(10)	1680	1	1844290
3123	10.0	4.7	1.1	chr19	21602858	21603332	(37014284)	+	LTR15	LTR/ERV1	1	493	(0)	1844302
5262	19.4	7.0	3.8	chr19	21603333	21604513	(37013103)	+	HERV1_I-int	LTR/ERV1	1	1221	(7580)	1844302
402	28.6	14.5	1.7	chr19	28606436	28606609	(30011007)	+	LTR2	LTR/ERV1	1	200	(263)	1849048
1522	12.0	0.5	0.0	chr19	28606630	28606838	(30010778)	+	LTR2	LTR/ERV1	292	501	(0)	1849048
2582	14.6	0.0	1.3	chr19	28606839	28607227	(30010389)	+	HERVE-int	LTR/ERV1	1	384	(7463)	1849048
25947	15.8	0.8	1.3	chr19	28613571	28614817	(30002799)	+	HERVE-int	LTR/ERV1	6549	7810	(3)	1849048
1527	22.0	7.8	6.4	chr19	28614818	28615273	(30002343)	+	LTR2	LTR/ERV1	1	463	(0)	1849048
1770	18.7	0.0	1.9	chr19	28615532	28615847	(30001769)	+	AluJb	SINE/Alu	1	310	(2)	1849050
361	18.5	24.7	1.4	chr19	28615946	28616093	(30001523)	+	ORSL	DNA/hAT-Tip100	2	195	(80)	1849051
242	36.1	5.7	3.6	chr19	28616342	28616479	(30001137)	C	L2b	LINE/L2	(5)	3370	3230	1849052
18	4.7	0.0	0.0	chr19	28616602	28616623	(30000993)	+	(CA)n	Simple_repeat	1	22	(0)	1849053
18	17.7	0.0	0.0	chr19	29269913	29269944	(29347672)	+	(C)n	Simple_repeat	1	32	(0)	1849995
2103	13.8	3.6	0.6	chr19	29650406	29650814	(28966802)	C	MER4B	LTR/ERV1	(15)	885	181	1850569
377	12.5	10.0	0.0	chr19	29650815	29650886	(28966730)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	1850570
1069	9.0	6.2	0.6	chr19	29650889	29651056	(28966560)	C	MER4B	LTR/ERV1	(432)	178	1	1850569
2345	23.8	2.0	8.2	chr19	29651057	29651433	(28966183)	C	L1ME1	LINE/L1	(106)	6073	5732	1850567
14	14.1	4.7	4.4	chr19	29812487	29812529	(28805087)	+	(CCG)n	Simple_repeat	1	45	(0)	1850909
28	0.0	0.0	0.0	chr19	29812602	29812628	(28804988)	+	(GGACG)n	Simple_repeat	1	27	(0)	1850910
640	31.0	6.8	2.2	chr19	29870932	29871254	(28746362)	C	L1ME3G	LINE/L1	(574)	350	12	1851039
1539	10.1	20.1	0.0	chr19	29871658	29871895	(28745721)	+	AluSz6	SINE/Alu	1	298	(14)	1851040
892	17.4	7.5	5.3	chr19	29872814	29873020	(28744596)	C	L1PA16	LINE/L1	(9)	6157	5946	1851043
199	28.4	6.0	7.8	chr19	32407642	32407744	(26209872)	+	L2a	LINE/L2	3322	3422	(4)	1854740
3342	29.5	5.7	3.2	chr19	32421647	32422629	(26194987)	+	L1M7	LINE/L1	216	1208	(5010)	1854768
13	21.4	2.6	0.0	chr19	33125131	33125188	(25492428)	+	A-rich	Low_complexity	1	59	(0)	1856228
1807	12.1	8.2	0.7	chr19	33125404	33125675	(25491941)	C	AluSx3	SINE/Alu	(17)	294	1	1856229
12	4.3	8.3	0.0	chr19	33263673	33263696	(25353920)	+	(GGAGA)n	Simple_repeat	1	26	(0)	1856502
2540	7.1	0.0	0.0	chr19	33263958	33264266	(25353350)	C	AluY	SINE/Alu	(2)	309	1	1856503
19	26.0	1.4	4.0	chr19	33373697	33373770	(25243846)	+	(GGC)n	Simple_repeat	1	75	(0)	1856707
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
16	22.1	2.9	5.6	chr19	34428444	34428513	(24189103)	+	G-rich	Low_complexity	1	72	(0)	1858627
1758	22.3	10.0	8.1	chr19	34972369	34972853	(23644763)	C	MLT1G1	LTR/ERVL-MaLR	(61)	518	1	1859416
928	15.7	2.4	0.1	chr19	34973115	34973285	(23644331)	C	MLT1E3	LTR/ERVL-MaLR	(8)	616	372	1859418
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
15	4.0	3.6	3.5	chr19	35030408	35030435	(23587181)	+	(CCCT)n	Simple_repeat	1	29	(0)	1859551
31	0.0	0.0	0.0	chr19	35030438	35030466	(23587150)	+	(GCC)n	Simple_repeat	1	29	(0)	1859552
322	35.6	8.0	0.0	chr19	35090684	35090832	(23526784)	C	MIR	SINE/MIR	(0)	262	101	1859690
33	25.6	3.4	1.6	chr19	35134871	35134989	(23482627)	+	(TTTCTG)n	Simple_repeat	1	123	(0)	1859790
21	10.4	0.0	0.0	chr19	35135033	35135063	(23482553)	+	(TG)n	Simple_repeat	1	31	(0)	1859791
19	21.8	1.6	3.2	chr19	35142957	35143018	(23474598)	+	(CGCCCC)n	Simple_repeat	1	63	(0)	1859808
23	14.9	0.0	6.7	chr19	35143133	35143192	(23474424)	+	G-rich	Low_complexity	1	60	(0)	1859809
17	22.3	3.7	0.0	chr19	35269011	35269028	(23348588)	+	(GCCC)n	Simple_repeat	1	18	(0)	1860060
32	0.0	5.4	0.0	chr19	35269029	35269065	(23348551)	+	(CCCCT)n	Simple_repeat	1	39	(0)	1860061
17	22.3	3.7	0.0	chr19	35269066	35269100	(23348516)	+	(GCCC)n	Simple_repeat	3	39	(0)	1860062
13	22.1	0.0	0.0	chr19	35269130	35269161	(23348455)	+	(CCG)n	Simple_repeat	1	32	(0)	1860063
27	0.0	0.0	3.3	chr19	35269188	35269217	(23348399)	+	(CCCCGG)n	Simple_repeat	1	30	(0)	1860064
19	16.2	0.0	2.3	chr19	35269706	35269748	(23347868)	+	(GGCG)n	Simple_repeat	1	43	(0)	1860065
12	15.8	0.0	3.3	chr19	35270024	35270053	(23347563)	+	G-rich	Low_complexity	1	30	(0)	1860066
2058	12.0	0.0	0.0	chr19	35305673	35305947	(23311669)	+	AluSz6	SINE/Alu	1	275	(37)	1860143
209	33.8	5.3	3.8	chr19	35318663	35318902	(23298714)	C	L2a	LINE/L2	(529)	2890	2647	1860170
208	25.8	7.0	0.0	chr19	35495731	35495823	(23121793)	C	L2b	LINE/L2	(34)	3341	3242	1860545
16	0.0	0.0	0.0	chr19	35900075	35900092	(22717524)	+	(C)n	Simple_repeat	1	18	(0)	1861404
1216	29.6	7.9	6.1	chr19	37550278	37551772	(21065844)	+	SST1	Satellite/centr	29	1552	(11)	1864656
19	28.2	6.2	0.0	chr19	37551773	37551853	(21065763)	+	(TG)n	Simple_repeat	1	86	(0)	1864657
1586	28.2	8.6	3.7	chr19	37552041	37552665	(21064951)	C	L1MEc	LINE/L1	(3122)	3197	2516	1864658
2561	6.2	0.3	0.0	chr19	38217922	38218227	(20399389)	+	AluSc	SINE/Alu	1	307	(2)	1866132
408	31.2	8.3	3.9	chr19	38218253	38218535	(20399081)	+	MIRb	SINE/MIR	53	268	(0)	1866133
1693	16.3	4.4	1.7	chr19	38255128	38255415	(20362201)	C	AluJb	SINE/Alu	(16)	296	1	1866235
12	21.6	7.1	4.0	chr19	38255533	38255602	(20362014)	+	(TGTGGC)n	Simple_repeat	1	75	(0)	1866236
21	24.3	0.0	0.0	chr19	38256748	38256798	(20360818)	+	(TTCA)n	Simple_repeat	1	51	(0)	1866237
2298	9.2	0.0	0.0	chr19	38256810	38257104	(20360512)	C	AluSz	SINE/Alu	(17)	295	1	1866238
2151	11.7	0.0	3.5	chr19	38269909	38270025	(20347591)	C	AluSx	SINE/Alu	(196)	116	1	1866272
454	23.7	11.7	5.5	chr19	38270358	38270540	(20347076)	C	L2a	LINE/L2	(0)	3426	3231	1866274
16	21.7	0.0	0.0	chr19	38316031	38316062	(20301554)	+	(C)n	Simple_repeat	1	32	(0)	1866378
967	18.1	3.4	7.0	chr19	38316237	38316451	(20301165)	+	AluJo	SINE/Alu	14	220	(92)	1866379
205	30.3	6.3	6.3	chr19	38374152	38374202	(20243414)	C	L2	LINE/L2	(1077)	2342	2292	1866526
213	26.5	16.4	0.3	chr19	38374243	38374355	(20243261)	+	MIR	SINE/MIR	18	155	(113)	1866528
15	26.1	1.4	4.3	chr19	38388628	38388716	(20228900)	+	(CCCCTCC)n	Simple_repeat	1	86	(0)	1866554
12	20.6	3.8	8.5	chr19	38388723	38388801	(20228815)	+	(GCCGGA)n	Simple_repeat	1	82	(0)	1866555
295	30.4	3.2	0.0	chr19	38649449	38649540	(19968076)	+	MIR	SINE/MIR	48	142	(120)	1867186
2493	7.7	0.0	0.0	chr19	38652804	38653102	(19964514)	+	AluSx1	SINE/Alu	1	299	(13)	1867192
871	9.3	0.8	0.0	chr19	38832012	38832129	(19785487)	+	AluYc	SINE/Alu	181	299	(0)	1867545
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
949	14.5	0.7	0.7	chr19	38851618	38851769	(19765847)	+	AluJr	SINE/Alu	137	288	(24)	1867574
28	30.0	0.0	4.7	chr19	38852165	38852292	(19765324)	+	(CCCCCGC)n	Simple_repeat	1	128	(0)	1867575
212	25.0	4.0	1.4	chr19	38852673	38852745	(19764871)	C	MIRc	SINE/MIR	(122)	146	72	1867576
2425	4.6	0.0	0.3	chr19	39186873	39187196	(19430420)	C	AluY	SINE/Alu	(0)	311	1	1868479
1975	13.2	0.0	3.6	chr19	39187197	39187310	(19430306)	C	AluJb	SINE/Alu	(177)	135	22	1868478
12	21.0	5.9	1.9	chr19	39187316	39187366	(19430250)	+	(TCTCTG)n	Simple_repeat	1	54	(0)	1868480
16	17.1	3.0	0.0	chr19	39320466	39320498	(19297118)	+	(CA)n	Simple_repeat	1	34	(0)	1868831
11	14.8	4.9	4.7	chr19	39320618	39320658	(19296958)	+	G-rich	Low_complexity	1	43	(0)	1868832
22	25.6	4.1	2.9	chr19	39320668	39320765	(19296851)	+	(CGCA)n	Simple_repeat	1	102	(0)	1868833
21	23.4	4.3	4.2	chr19	39320881	39320972	(19296644)	+	(GCC)n	Simple_repeat	1	96	(0)	1868834
1941	11.9	0.0	5.4	chr19	39339407	39339700	(19277916)	+	AluJb	SINE/Alu	1	278	(34)	1868890
38	0.0	0.0	0.0	chr19	39339712	39339744	(19277872)	+	(CA)n	Simple_repeat	1	33	(0)	1868891
812	27.5	19.7	1.7	chr19	39339786	39340027	(19277589)	+	L2a	LINE/L2	2925	3215	(211)	1868884
2108	14.7	0.3	0.3	chr19	39340028	39340339	(19277277)	C	AluSz6	SINE/Alu	(0)	312	1	1868892
15	8.6	7.7	2.4	chr19	39342130	39342180	(19275436)	+	(CGCCC)n	Simple_repeat	1	53	(0)	1868895
60	24.3	4.3	4.1	chr19	39342375	39342630	(19274986)	+	(CGG)n	Simple_repeat	1	267	(0)	1868896
29	2.9	2.9	0.0	chr19	39406768	39406802	(19210814)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1869012
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
2145	10.5	1.0	1.0	chr19	39431435	39431729	(19185887)	+	AluSx	SINE/Alu	1	295	(17)	1869053
2339	10.4	0.7	0.0	chr19	39431743	39432050	(19185566)	+	AluSq2	SINE/Alu	1	310	(3)	1869054
13	22.5	2.0	3.9	chr19	39834170	39834219	(18783397)	+	(CCTCC)n	Simple_repeat	1	51	(0)	1869713
24	10.9	0.0	0.0	chr19	40285268	40285307	(18332309)	+	(CGGCAG)n	Simple_repeat	1	40	(0)	1870651
1825	14.3	0.7	3.6	chr19	40404567	40404873	(18212743)	C	AluJr	SINE/Alu	(14)	298	1	1870962
728	31.9	7.0	5.7	chr19	40424526	40425238	(18192378)	C	L2a	LINE/L2	(145)	3242	2523	1871021
13	29.6	0.0	0.0	chr19	40425604	40425648	(18191968)	+	(CGG)n	Simple_repeat	1	45	(0)	1871022
492	25.5	20.9	0.5	chr19	40433498	40433706	(18183910)	C	L2a	LINE/L2	(338)	3081	2819	1871042
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
245	30.7	0.1	1.1	chr19	40434245	40434336	(18183280)	+	MIRc	SINE/MIR	83	176	(86)	1871051
22	29.3	0.0	2.4	chr19	40530404	40530427	(18087189)	+	(GGCG)n	Simple_repeat	1	78	(0)	1871327
19	26.9	1.9	0.0	chr19	40530428	40530481	(18087135)	+	(GC)n	Simple_repeat	1	55	(0)	1871328
26	0.0	0.0	0.0	chr19	40579099	40579123	(18038493)	+	(ATTT)n	Simple_repeat	1	25	(0)	1871456
243	32.7	3.2	1.7	chr19	40598566	40598696	(18018920)	C	MIR3	SINE/MIR	(136)	132	2	1871499
206	24.1	9.4	0.0	chr19	40702368	40702425	(17915191)	C	MIRc	SINE/MIR	(120)	148	85	1871737
12	13.9	0.0	0.0	chr19	40702447	40702470	(17915146)	+	(GATG)n	Simple_repeat	1	24	(0)	1871738
30	0.0	0.0	0.0	chr19	40715846	40715871	(17901745)	+	(TG)n	Simple_repeat	1	26	(0)	1871775
193	30.9	11.8	0.0	chr19	40716067	40716163	(17901453)	+	MIR3	SINE/MIR	82	191	(17)	1871776
355	37.9	1.8	1.2	chr19	40802496	40802658	(17814958)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	4	1871998
1846	14.8	0.4	0.4	chr19	41362967	41363243	(17254373)	+	AluJo	SINE/Alu	5	281	(31)	1873247
319	24.8	4.2	3.8	chr19	41363546	41363693	(17253923)	C	MIRb	SINE/MIR	(89)	179	27	1873248
598	28.1	7.3	1.5	chr19	41924266	41924471	(16693145)	+	MIR	SINE/MIR	15	233	(29)	1874181
535	31.3	0.6	1.2	chr19	41929930	41930094	(16687522)	+	MIRb	SINE/MIR	97	260	(8)	1874198
13	17.7	5.3	0.0	chr19	41930441	41930478	(16687138)	+	(TGTATC)n	Simple_repeat	1	40	(0)	1874199
2054	13.0	0.0	1.4	chr19	42018374	42018666	(16598950)	+	AluSz6	SINE/Alu	2	290	(22)	1874384
18	4.8	0.0	0.0	chr19	42018669	42018690	(16598926)	+	(G)n	Simple_repeat	1	22	(0)	1874385
200	31.1	10.4	1.0	chr19	42018873	42018976	(16598640)	+	L2c	LINE/L2	3273	3387	(0)	1874386
17	9.4	5.9	5.6	chr19	42076164	42076214	(16541402)	+	(GCGAGA)n	Simple_repeat	1	54	(0)	1874520
15	13.6	0.0	2.9	chr19	42253917	42253950	(16363666)	+	(CCCCGC)n	Simple_repeat	1	34	(0)	1874888
12	18.7	2.1	6.1	chr19	42254041	42254088	(16363528)	+	G-rich	Low_complexity	1	49	(0)	1874889
17	16.5	4.1	2.0	chr19	42269438	42269486	(16348130)	+	G-rich	Low_complexity	1	51	(0)	1874929
13	23.8	2.2	2.1	chr19	42279814	42279859	(16337757)	+	GA-rich	Low_complexity	1	47	(0)	1874950
279	26.7	14.4	1.0	chr19	42280229	42280330	(16337286)	+	MIRb	SINE/MIR	19	136	(132)	1874951
12	28.5	4.6	1.5	chr19	42280618	42280682	(16336934)	+	(GCCG)n	Simple_repeat	1	68	(0)	1874952
14	12.5	0.0	0.0	chr19	42281134	42281159	(16336457)	+	(GGGT)n	Simple_repeat	1	26	(0)	1874953
49	0.0	0.0	0.0	chr19	42303065	42303106	(16314510)	+	(GT)n	Simple_repeat	1	42	(0)	1874978
28	8.6	0.0	0.0	chr19	42387652	42387689	(16229927)	+	(T)n	Simple_repeat	1	38	(0)	1875173
2433	9.3	0.0	0.0	chr19	42387700	42388009	(16229607)	+	AluSg	SINE/Alu	1	310	(0)	1875174
2343	11.6	3.2	1.6	chr19	42548237	42548605	(16069011)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1875496
16	5.2	0.0	0.0	chr19	42548665	42548684	(16068932)	+	(G)n	Simple_repeat	1	20	(0)	1875497
1512	17.0	1.0	9.9	chr19	43500643	43500965	(15116651)	C	AluJr	SINE/Alu	(18)	294	1	1876949
387	26.0	9.4	0.7	chr19	43500966	43501120	(15116496)	+	L1MC5a	LINE/L1	2534	2703	(74)	1876948
2426	8.5	0.0	1.3	chr19	43501168	43501484	(15116132)	C	AluSq2	SINE/Alu	(0)	313	1	1876950
11	17.4	0.0	5.6	chr19	43503931	43503966	(15113650)	+	(CTGCCT)n	Simple_repeat	1	36	(0)	1876955
473	19.9	1.0	3.6	chr19	43634770	43635084	(14982532)	+	MSR1	Satellite	1	306	(0)	1877291
669	15.2	0.3	1.8	chr19	43635426	43636069	(14981547)	+	MSR1	Satellite	1	634	(0)	1877292
12	8.4	0.0	6.9	chr19	43774647	43774675	(14842941)	+	(GGTCA)n	Simple_repeat	1	29	(0)	1877645
17	17.2	0.0	2.4	chr19	43774730	43774779	(14842837)	+	GA-rich	Low_complexity	1	48	(0)	1877646
447	22.6	4.7	0.0	chr19	43774859	43774960	(14842656)	C	L2a	LINE/L2	(16)	3410	3304	1877647
275	35.3	3.8	4.3	chr19	44003235	44003444	(14614172)	+	MIRb	SINE/MIR	28	236	(26)	1878041
21	4.1	0.0	0.0	chr19	44212367	44212391	(14405225)	+	(T)n	Simple_repeat	1	25	(0)	1878385
14	15.8	0.0	5.1	chr19	44212678	44212716	(14404900)	+	(GAGGCC)n	Simple_repeat	1	39	(0)	1878386
481	27.7	2.8	0.0	chr19	44212780	44212916	(14404700)	+	MIR	SINE/MIR	95	235	(27)	1878387
180	16.7	0.0	0.0	chr19	44695952	44695981	(13921635)	+	MIRc	SINE/MIR	119	148	(120)	1879364
2141	12.6	0.0	0.0	chr19	44696049	44696333	(13921283)	+	AluSz	SINE/Alu	1	285	(27)	1879365
18	31.9	0.0	0.0	chr19	44748429	44748491	(13869125)	+	(CCCCC)n	Simple_repeat	1	63	(0)	1879522
11	25.1	2.2	2.2	chr19	44753586	44753630	(13863986)	+	(ACCGGC)n	Simple_repeat	1	46	(0)	1879532
18	22.1	0.0	0.0	chr19	44753804	44753840	(13863776)	+	G-rich	Low_complexity	1	37	(0)	1879533
284	18.2	5.2	0.0	chr19	44753974	44754028	(13863588)	C	MER45A	DNA/hAT-Tip100	(44)	134	77	1879534
2072	5.5	0.3	9.4	chr19	44772034	44772368	(13845248)	C	AluY	SINE/Alu	(0)	311	1	1879581
2070	11.8	0.4	0.0	chr19	44772377	44772656	(13844960)	C	AluSx	SINE/Alu	(15)	297	17	1879582
19	29.8	1.5	0.0	chr19	44846535	44846601	(13771015)	+	(GCCGCT)n	Simple_repeat	1	68	(0)	1879788
20	15.0	0.0	0.0	chr19	44846570	44846606	(13771010)	+	(GCT)n	Simple_repeat	1	37	(0)	1879789
11	15.5	0.0	9.3	chr19	44906273	44906315	(13711301)	+	(AGAATG)n	Simple_repeat	1	43	(0)	1879936
2136	8.2	4.4	0.0	chr19	44909522	44909803	(13707813)	C	AluSz	SINE/Alu	(17)	295	1	1879943
770	18.9	10.1	9.2	chr19	44909812	44910028	(13707588)	C	AluJo	SINE/Alu	(16)	296	78	1879944
1309	14.3	1.4	0.5	chr19	44910030	44910238	(13707378)	C	AluJo	SINE/Alu	(101)	211	1	1879945
737	21.2	7.4	0.0	chr19	45016714	45016850	(13600766)	+	AluSx	SINE/Alu	137	284	(28)	1880239
28	0.0	0.0	0.0	chr19	45016851	45016877	(13600739)	+	(AAAC)n	Simple_repeat	1	27	(0)	1880240
616	28.4	9.3	0.0	chr19	45016891	45017133	(13600483)	C	MER20B	DNA/hAT-Charlie	(515)	268	1	1880236
680	15.4	4.0	1.6	chr19	45017344	45017466	(13600150)	+	AluJr	SINE/Alu	173	298	(14)	1880241
864	13.7	0.0	0.0	chr19	45047325	45047441	(13570175)	+	FRAM	SINE/Alu	60	176	(0)	1880335
729	10.8	2.9	0.0	chr19	45047460	45047561	(13570055)	+	U6	snRNA	3	107	(0)	1880336
787	18.7	11.1	0.5	chr19	45047584	45047793	(13569823)	+	L1MB2	LINE/L1	5936	6170	(1)	1880337
2106	10.9	3.3	0.7	chr19	45047802	45048095	(13569521)	+	AluSq2	SINE/Alu	1	302	(11)	1880338
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
12	19.6	2.9	0.0	chr19	45251417	45251451	(13366165)	+	(CCCTCC)n	Simple_repeat	1	36	(0)	1880813
12	12.2	3.7	0.0	chr19	45251505	45251531	(13366085)	+	GA-rich	Low_complexity	1	28	(0)	1880814
16	23.5	0.0	0.0	chr19	45251540	45251574	(13366042)	+	(C)n	Simple_repeat	1	35	(0)	1880815
590	24.5	0.1	4.0	chr19	45253775	45253946	(13363670)	+	MIRb	SINE/MIR	14	184	(84)	1880819
2073	12.5	2.0	0.7	chr19	45318861	45319156	(13298460)	C	AluJb	SINE/Alu	(12)	300	1	1880993
368	27.7	14.4	0.7	chr19	45319170	45319307	(13298309)	C	MIRb	SINE/MIR	(20)	248	89	1880994
351	21.5	20.7	0.9	chr19	45319320	45319427	(13298189)	C	MIR	SINE/MIR	(11)	251	117	1880995
1939	13.7	0.7	3.6	chr19	45381650	45381956	(13235660)	+	AluSx	SINE/Alu	2	299	(13)	1881157
2000	10.2	5.5	3.3	chr19	45381959	45382263	(13235353)	+	AluSx1	SINE/Alu	1	312	(0)	1881158
12	7.0	5.9	5.6	chr19	45382264	45382297	(13235319)	+	A-rich	Low_complexity	1	36	(0)	1881159
193	27.3	0.0	0.0	chr19	45405400	45405443	(13212173)	+	MIR3	SINE/MIR	111	154	(54)	1881219
827	25.3	3.1	10.1	chr19	45424217	45424524	(13193092)	C	L2b	LINE/L2	(0)	3375	3090	1881264
493	26.8	4.3	3.5	chr19	45424530	45424908	(13192708)	C	L1ME3G	LINE/L1	(769)	5377	5059	1881265
13	28.2	0.0	6.8	chr19	45440176	45440248	(13177368)	+	(CCCCATC)n	Simple_repeat	1	73	(0)	1881323
2362	7.7	1.3	1.9	chr19	45450488	45450799	(13166817)	+	AluSx	SINE/Alu	1	310	(2)	1881347
15	23.3	0.0	4.1	chr19	45450865	45450883	(13166733)	+	(CGCC)n	Simple_repeat	1	44	(0)	1881348
19	11.7	0.0	0.0	chr19	45450884	45450911	(13166705)	+	(C)n	Simple_repeat	1	28	(0)	1881349
11	13.2	5.7	2.7	chr19	45507667	45507701	(13109915)	+	(GAGCCC)n	Simple_repeat	1	37	(0)	1881495
20	3.8	0.0	0.0	chr19	45509518	45509544	(13108072)	+	(CCA)n	Simple_repeat	1	27	(0)	1881496
1076	9.5	1.2	4.8	chr19	45581683	45581796	(13035820)	C	LTR8	LTR/ERV1	(0)	691	579	1881702
2158	10.8	0.7	1.4	chr19	45581797	45582092	(13035524)	C	AluSg	SINE/Alu	(12)	298	5	1881703
1076	9.5	1.2	4.8	chr19	45582093	45582143	(13035473)	C	LTR8	LTR/ERV1	(113)	578	532	1881702
2153	13.3	0.3	0.0	chr19	45582151	45582458	(13035158)	C	AluSx1	SINE/Alu	(2)	310	2	1881704
220	26.8	4.7	0.0	chr19	45639039	45639120	(12978496)	C	MIRb	SINE/MIR	(120)	148	63	1881868
12	12.6	0.0	3.6	chr19	45639451	45639478	(12978138)	+	(CCCGC)n	Simple_repeat	1	28	(0)	1881869
710	23.8	9.3	4.7	chr19	45639574	45639711	(12977905)	+	MIR	SINE/MIR	13	159	(103)	1881870
193	14.9	2.1	6.0	chr19	45642564	45642613	(12975003)	+	MIR3	SINE/MIR	66	113	(95)	1881875
2281	5.7	0.7	8.1	chr19	45642681	45643014	(12974602)	+	AluSc	SINE/Alu	1	309	(0)	1881876
423	27.9	13.9	1.4	chr19	45646425	45646562	(12971054)	+	MIR	SINE/MIR	10	167	(95)	1881882
416	28.1	8.0	1.6	chr19	45646561	45646748	(12970868)	C	L2a	LINE/L2	(0)	3426	3226	1881883
911	11.3	0.8	0.8	chr19	45691538	45691670	(12925946)	C	FLAM_C	SINE/Alu	(10)	133	1	1882013
248	29.5	2.1	6.9	chr19	45693190	45693291	(12924325)	+	MIR3	SINE/MIR	110	206	(2)	1882014
312	32.3	17.6	0.5	chr19	45716759	45716960	(12900656)	C	MIR	SINE/MIR	(11)	251	8	1882072
12	21.2	2.5	2.4	chr19	45730644	45730683	(12886933)	+	(CCACC)n	Simple_repeat	1	41	(0)	1882116
70	0.0	0.0	0.0	chr19	45770205	45770266	(12847350)	+	(CAG)n	Simple_repeat	1	62	(0)	1882221
12	16.3	7.0	2.2	chr19	45770291	45770333	(12847283)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	1882222
12	9.7	0.0	0.0	chr19	45864341	45864362	(12753254)	+	(CGGG)n	Simple_repeat	1	22	(0)	1882444
293	28.3	3.6	0.9	chr19	45868810	45868916	(12748700)	+	L2a	LINE/L2	3245	3354	(72)	1882452
2181	9.9	1.0	4.0	chr19	45868917	45869239	(12748377)	C	AluSp	SINE/Alu	(0)	313	1	1882453
748	24.7	7.7	1.7	chr19	45869253	45869483	(12748133)	+	MIR	SINE/MIR	5	250	(12)	1882454
213	26.0	6.5	2.5	chr19	45883360	45883459	(12734157)	+	MIRc	SINE/MIR	60	166	(64)	1882485
25	27.4	0.0	1.3	chr19	45886057	45886132	(12731484)	+	(GCC)n	Simple_repeat	1	76	(0)	1882486
658	29.1	7.2	5.1	chr19	45900121	45900639	(12716977)	+	L2c	LINE/L2	2823	3373	(2)	1882525
202	33.3	8.7	0.0	chr19	45900699	45900782	(12716834)	+	MIRb	SINE/MIR	90	181	(87)	1882526
947	28.9	12.5	3.0	chr19	46347806	46348305	(12269311)	C	L2a	LINE/L2	(0)	3426	2881	1883451
3984	11.4	0.8	11.5	chr19	46587668	46588412	(12029204)	+	MER4A	LTR/ERV1	1	664	(0)	1884066
36	2.9	0.0	0.0	chr19	46632943	46632977	(11984639)	+	(TC)n	Simple_repeat	1	35	(0)	1884152
56	0.0	0.0	0.0	chr19	46632978	46633027	(11984589)	+	(ATAG)n	Simple_repeat	1	50	(0)	1884153
195	27.3	0.0	0.0	chr19	46633078	46633121	(11984495)	+	L2b	LINE/L2	3271	3314	(61)	1884154
1033	25.9	3.0	3.6	chr19	46633195	46633499	(11984117)	+	L2b	LINE/L2	3073	3375	(0)	1884155
852	25.1	2.9	1.7	chr19	46662391	46662629	(11954987)	+	MIR	SINE/MIR	11	252	(10)	1884231
13	22.6	1.7	6.7	chr19	46745903	46745963	(11871653)	+	(TCCC)n	Simple_repeat	1	57	(0)	1884423
12	24.8	0.0	0.0	chr19	46746024	46746057	(11871559)	+	(CCCG)n	Simple_repeat	1	34	(0)	1884424
13	5.3	0.0	0.0	chr19	46746071	46746090	(11871526)	+	(GGC)n	Simple_repeat	1	20	(0)	1884425
17	30.2	0.0	2.8	chr19	46746300	46746371	(11871245)	+	G-rich	Low_complexity	1	72	(0)	1884426
14	30.0	1.9	0.0	chr19	46787632	46787684	(11829932)	+	(AGC)n	Simple_repeat	1	54	(0)	1884539
17	22.8	5.9	1.4	chr19	46787722	46787789	(11829827)	+	(CCACCG)n	Simple_repeat	1	72	(0)	1884540
13	22.7	2.3	2.3	chr19	46861010	46861052	(11756564)	+	(GCG)n	Simple_repeat	1	44	(0)	1884772
24	11.1	6.1	0.0	chr19	46861071	46861119	(11756497)	+	(CCG)n	Simple_repeat	1	52	(0)	1884773
13	12.0	3.7	0.0	chr19	46861314	46861340	(11756276)	+	GA-rich	Low_complexity	1	28	(0)	1884774
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
15	12.0	0.0	3.3	chr19	47112359	47112388	(11505228)	+	(CCT)n	Simple_repeat	1	30	(0)	1885279
29	30.4	2.4	1.6	chr19	47112440	47112563	(11505053)	+	(GGC)n	Simple_repeat	1	127	(0)	1885280
1689	19.0	1.7	0.3	chr19	47120126	47120409	(11497207)	C	AluJr	SINE/Alu	(22)	290	3	1885301
344	29.1	5.2	2.7	chr19	47120515	47120701	(11496915)	+	LTR37B	LTR/ERV1	246	437	(31)	1885302
1870	17.0	0.7	0.0	chr19	47120702	47120995	(11496621)	C	AluJb	SINE/Alu	(16)	296	1	1885303
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
236	31.0	6.5	6.0	chr19	47227046	47227213	(11390403)	C	MIR1_Amn	SINE/MIR	(51)	179	11	1885598
13	15.2	2.5	4.9	chr19	47230400	47230439	(11387177)	+	(GCCC)n	Simple_repeat	1	41	(0)	1885599
29	0.0	0.0	3.1	chr19	47231234	47231265	(11386351)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1885601
44	2.4	0.0	0.0	chr19	47241347	47241388	(11376228)	+	(CA)n	Simple_repeat	1	42	(0)	1885627
20	21.7	0.0	9.0	chr19	47256748	47256836	(11360780)	+	(GGCGG)n	Simple_repeat	1	89	(0)	1885681
2081	9.8	0.3	1.4	chr19	47312979	47313274	(11304342)	C	AluSg	SINE/Alu	(16)	294	2	1885838
2228	7.2	1.7	0.0	chr19	47313467	47313756	(11303860)	+	AluY	SINE/Alu	1	295	(16)	1885839
444	30.0	2.9	5.7	chr19	47313758	47313969	(11303647)	+	MIRb	SINE/MIR	27	232	(36)	1885840
319	24.4	4.7	13.2	chr19	47315635	47315823	(11301793)	+	MamRep38	DNA/hAT	78	249	(46)	1885847
298	27.0	0.0	1.1	chr19	47315825	47315914	(11301702)	C	L1MC4	LINE/L1	(1)	8041	7953	1885848
51	6.6	0.0	0.0	chr19	47315937	47316000	(11301616)	+	(ATCC)n	Simple_repeat	1	64	(0)	1885849
1641	11.9	0.0	0.8	chr19	47316013	47316248	(11301368)	C	AluSz	SINE/Alu	(19)	293	60	1885850
29	2.6	5.1	0.0	chr19	47316279	47316317	(11301299)	+	(TATC)n	Simple_repeat	1	41	(0)	1885851
18	32.5	6.3	0.7	chr19	47316319	47316445	(11301171)	+	(TCTA)n	Simple_repeat	1	135	(0)	1885852
203	32.0	6.0	2.3	chr19	47337118	47337245	(11280371)	C	MIR	SINE/MIR	(44)	218	86	1885908
2366	8.2	0.0	0.0	chr19	47337382	47337672	(11279944)	+	AluSx4	SINE/Alu	1	291	(19)	1885909
36	28.8	5.8	0.6	chr19	47471853	47472024	(11145592)	+	GA-rich	Low_complexity	1	182	(0)	1886246
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
15	14.4	2.4	4.7	chr19	47608664	47608705	(11008911)	+	G-rich	Low_complexity	1	43	(0)	1886567
22	13.0	0.0	4.3	chr19	47608826	47608871	(11008745)	+	GA-rich	Low_complexity	1	46	(0)	1886568
16	0.0	0.0	0.0	chr19	47608894	47608910	(11008706)	+	(T)n	Simple_repeat	1	17	(0)	1886569
18	20.7	0.0	6.3	chr19	47608967	47609029	(11008587)	+	G-rich	Low_complexity	1	63	(0)	1886570
20	0.0	0.0	0.0	chr19	47609377	47609398	(11008218)	+	(T)n	Simple_repeat	1	22	(0)	1886571
15	22.7	1.8	3.6	chr19	47609411	47609465	(11008151)	+	(CCACCG)n	Simple_repeat	1	56	(0)	1886572
16	11.7	2.4	4.8	chr19	47609610	47609653	(11007963)	+	(CCCCCT)n	Simple_repeat	1	42	(0)	1886573
191	29.7	9.0	0.9	chr19	47648427	47648538	(10969078)	C	L2a	LINE/L2	(107)	3319	3198	1886682
552	9.2	1.3	0.0	chr19	47648591	47648666	(10968950)	+	AluSq10	SINE/Alu	1	77	(236)	1886683
2007	12.4	0.3	3.4	chr19	47648667	47648852	(10968764)	C	AluSz	SINE/Alu	(0)	312	137	1886684
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
536	16.1	1.0	0.2	chr19	47790261	47790358	(10827258)	C	FLAM_C	SINE/Alu	(9)	124	26	1887070
1960	15.9	0.7	0.7	chr19	47790743	47791051	(10826565)	+	AluJb	SINE/Alu	3	311	(1)	1887071
963	12.6	0.0	0.0	chr19	48103046	48103172	(10514444)	C	AluJo	SINE/Alu	(185)	127	1	1887947
205	30.6	6.1	0.0	chr19	48103220	48103281	(10514335)	+	MER91C	DNA/hAT-Tip100	63	128	(12)	1887948
226	32.5	1.2	0.0	chr19	48103567	48103649	(10513967)	+	MER117	DNA/hAT-Charlie	110	193	(4)	1887949
2297	11.5	0.0	0.0	chr19	48324635	48324946	(10292670)	C	AluSx1	SINE/Alu	(0)	312	1	1888476
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
15	28.6	2.3	4.5	chr19	48391489	48391575	(10226041)	+	G-rich	Low_complexity	1	89	(0)	1888647
741	6.7	0.9	0.0	chr19	48391923	48392486	(10225130)	+	MSR1	Satellite	1	569	(0)	1888648
20	4.1	0.0	0.0	chr19	48394182	48394206	(10223410)	+	(TG)n	Simple_repeat	1	25	(0)	1888651
17	26.7	0.0	0.0	chr19	48394258	48394306	(10223310)	+	(GTGT)n	Simple_repeat	1	49	(0)	1888652
199	24.3	2.8	10.3	chr19	48502665	48502742	(10114874)	+	MIRc	SINE/MIR	103	174	(94)	1888885
12	25.3	0.0	5.8	chr19	48511583	48511634	(10105982)	+	GA-rich	Low_complexity	1	52	(0)	1888912
200	26.9	13.3	0.0	chr19	48553696	48553773	(10063843)	+	MIR3	SINE/MIR	33	122	(86)	1889041
269	28.8	6.5	0.1	chr19	48554027	48554131	(10063485)	+	MIRb	SINE/MIR	74	187	(21)	1889042
14	21.7	0.0	10.3	chr19	48646681	48646758	(9970858)	+	(GGAGCG)n	Simple_repeat	1	78	(0)	1889273
7524	6.0	2.2	2.3	chr19	48753520	48753902	(9863714)	C	LTR13A	LTR/ERVK	(1)	965	602	1889516
2433	6.3	0.0	0.7	chr19	48753903	48754202	(9863414)	+	AluY	SINE/Alu	1	298	(13)	1889517
16	0.0	0.0	0.0	chr19	48810737	48810753	(9806863)	+	(T)n	Simple_repeat	1	17	(0)	1889665
2419	7.6	0.0	0.7	chr19	48811212	48811514	(9806102)	+	AluSx1	SINE/Alu	2	302	(10)	1889666
1348	15.1	4.7	0.4	chr19	48989500	48989724	(9627892)	C	AluJb	SINE/Alu	(76)	236	1	1890134
12	19.9	0.0	0.0	chr19	49103626	49103654	(9513962)	+	G-rich	Low_complexity	1	29	(0)	1890386
12	29.6	0.0	3.5	chr19	49119542	49119598	(9498018)	+	(CCAGAG)n	Simple_repeat	1	57	(0)	1890419
13	21.7	2.6	0.0	chr19	49119622	49119659	(9497957)	+	(CCCGGC)n	Simple_repeat	1	39	(0)	1890420
238	24.7	7.2	1.9	chr19	49151379	49151455	(9466161)	C	MIR3	SINE/MIR	(34)	174	98	1890478
294	20.7	2.7	2.5	chr19	49157903	49158099	(9459517)	C	MSR1	Satellite	(0)	197	1	1890486
353	20.2	5.3	2.7	chr19	49362587	49362806	(9254810)	C	MSR1	Satellite	(2)	225	1	1890950
15	10.7	7.3	0.0	chr19	49431785	49431805	(9185811)	+	(TTTTTAA)n	Simple_repeat	1	22	(0)	1891085
843	16.5	0.0	0.0	chr19	49431806	49431938	(9185678)	C	FLAM_C	SINE/Alu	(10)	133	1	1891086
15	10.7	7.3	0.0	chr19	49431939	49431957	(9185659)	+	(TTTTTAA)n	Simple_repeat	2	22	(0)	1891087
1119	13.1	0.0	0.0	chr19	49431962	49432121	(9185495)	C	AluJr	SINE/Alu	(16)	296	137	1891088
365	31.2	1.9	4.8	chr19	49473756	49473920	(9143696)	C	MIR3	SINE/MIR	(3)	205	46	1891167
16	0.0	0.0	0.0	chr19	49491403	49491420	(9126196)	+	(C)n	Simple_repeat	1	18	(0)	1891211
17	25.9	1.2	6.0	chr19	49556227	49556308	(9061308)	+	G-rich	Low_complexity	1	83	(0)	1891388
17	0.0	0.0	0.0	chr19	49591092	49591110	(9026506)	+	(T)n	Simple_repeat	1	19	(0)	1891487
19	20.3	0.0	0.0	chr19	49591155	49591199	(9026417)	+	(CCCCGCC)n	Simple_repeat	1	45	(0)	1891488
16	11.7	0.0	0.0	chr19	49591232	49591259	(9026357)	+	(GGC)n	Simple_repeat	1	28	(0)	1891489
16	20.2	0.0	4.1	chr19	49591443	49591491	(9026125)	+	(CCCCCTC)n	Simple_repeat	1	49	(0)	1891490
2384	8.7	0.0	0.3	chr19	49712061	49712359	(8905257)	+	AluSx1	SINE/Alu	1	298	(14)	1891746
269	29.4	4.7	1.9	chr19	49775892	49775995	(8841621)	C	MLT1L	LTR/ERVL-MaLR	(10)	600	494	1891917
235	30.1	9.1	5.4	chr19	49776156	49776471	(8841145)	+	L2c	LINE/L2	2910	3238	(149)	1891918
18	22.0	0.0	0.0	chr19	49890930	49890966	(8726650)	+	(C)n	Simple_repeat	1	37	(0)	1892143
291	25.1	6.0	5.8	chr19	49891206	49891378	(8726238)	C	MIR3	SINE/MIR	(34)	174	15	1892144
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
2055	12.8	0.3	0.0	chr19	49933980	49934261	(8683355)	+	AluSq2	SINE/Alu	22	304	(9)	1892238
2424	10.0	0.0	0.0	chr19	49934281	49934591	(8683025)	+	AluY	SINE/Alu	1	311	(0)	1892239
801	17.9	0.0	0.0	chr19	49934601	49934723	(8682893)	+	AluJo	SINE/Alu	5	127	(185)	1892240
12	28.5	3.6	0.0	chr19	50203737	50203791	(8413825)	+	(GCCGGCG)n	Simple_repeat	1	57	(0)	1892964
12	28.1	1.7	3.3	chr19	50500436	50500494	(8117122)	+	(TCCCCC)n	Simple_repeat	1	60	(0)	1893651
15	21.4	2.3	0.0	chr19	50551111	50551153	(8066463)	+	(CCGCCCT)n	Simple_repeat	1	44	(0)	1893768
17	16.1	3.9	3.7	chr19	50556247	50556298	(8061318)	+	G-rich	Low_complexity	1	54	(0)	1893779
189	35.2	7.8	3.6	chr19	50556523	50556743	(8060873)	+	L2a	LINE/L2	3194	3424	(2)	1893780
12	23.3	0.0	0.0	chr19	50639747	50639781	(7977835)	+	G-rich	Low_complexity	1	35	(0)	1893983
34	5.9	1.8	3.5	chr19	50639795	50639851	(7977765)	+	(GCC)n	Simple_repeat	1	58	(0)	1893984
269	30.7	13.7	0.0	chr19	50640220	50640434	(7977182)	+	MIRb	SINE/MIR	3	252	(10)	1893985
21	13.3	0.0	0.0	chr19	50719449	50719481	(7898135)	+	(C)n	Simple_repeat	1	33	(0)	1894157
39	18.8	2.7	3.5	chr19	50719701	50719869	(7897747)	+	(CCTC)n	Simple_repeat	1	167	(0)	1894158
14	33.9	0.0	4.5	chr19	50719891	50719978	(7897638)	+	(CGCCCC)n	Simple_repeat	1	88	(0)	1894159
12	25.9	0.0	2.3	chr19	50724026	50724068	(7893548)	+	(CAACCC)n	Simple_repeat	1	43	(0)	1894170
44	0.0	0.0	0.0	chr19	51020199	51020236	(7597380)	+	(AG)n	Simple_repeat	1	38	(0)	1894830
438	25.4	9.5	4.2	chr19	51020448	51020636	(7596980)	C	MIR3	SINE/MIR	(8)	200	1	1894831
2387	7.9	0.0	0.7	chr19	51020668	51020971	(7596645)	+	AluSx3	SINE/Alu	1	302	(9)	1894832
312	22.6	28.8	2.5	chr19	51094427	51094712	(7522904)	+	L2a	LINE/L2	3033	3424	(2)	1895001
1909	10.4	9.3	2.8	chr19	51094963	51095251	(7522365)	C	AluSx1	SINE/Alu	(1)	311	2	1895002
1631	20.0	1.6	5.0	chr19	51131939	51132317	(7485299)	+	MSTB1	LTR/ERVL-MaLR	1	366	(66)	1895064
760	6.4	0.7	0.0	chr19	51310391	51311446	(7306170)	C	MSR1	Satellite	(12)	1063	1	1895353
20	18.4	0.0	0.0	chr19	51311697	51311733	(7305883)	+	(C)n	Simple_repeat	1	37	(0)	1895354
15	28.3	4.0	1.3	chr19	51311939	51312012	(7305604)	+	G-rich	Low_complexity	1	77	(0)	1895355
11558	17.2	2.7	1.5	chr19	51465903	51468055	(7149561)	+	L1M2	LINE/L1	3133	5315	(982)	1895683
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
14	7.2	6.9	0.0	chr19	51689179	51689207	(6928409)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	1896049
14	27.5	6.2	1.2	chr19	51689230	51689309	(6928307)	+	G-rich	Low_complexity	1	85	(0)	1896050
217	29.5	5.2	5.8	chr19	51690676	51690812	(6926804)	+	MIR3	SINE/MIR	58	193	(15)	1896053
4289	7.3	0.5	0.2	chr19	51787119	51787670	(6829946)	+	MER41A	LTR/ERV1	1	554	(0)	1896255
2744	12.1	1.6	2.5	chr19	51807038	51807485	(6810131)	C	LTR3A	LTR/ERVK	(40)	444	1	1896287
3394	12.9	0.9	6.5	chr19	52688725	52689313	(5928303)	+	LTR61	LTR/ERV1	4	559	(0)	1897970
2041	10.4	0.4	0.0	chr19	53520061	53520330	(5097286)	C	AluSq2	SINE/Alu	(26)	287	17	1899506
189	20.0	16.7	0.0	chr19	53520507	53520551	(5097065)	C	OldhAT1	DNA/hAT-Ac	(929)	1919	1866	1899507
2462	8.1	0.0	0.0	chr19	54115892	54116200	(4501416)	C	AluSg	SINE/Alu	(1)	309	1	1901120
299	19.5	3.4	4.3	chr19	54161977	54162110	(4455506)	+	MSR1	Satellite	1	132	(0)	1901199
15	13.9	0.0	0.0	chr19	54162384	54162407	(4455209)	+	(G)n	Simple_repeat	1	24	(0)	1901200
15	3.8	3.5	3.3	chr19	54188174	54188202	(4429414)	+	(CCTCT)n	Simple_repeat	1	30	(0)	1901269
232	23.9	3.3	4.3	chr19	54188632	54188723	(4428893)	+	MSR1	Satellite	7	97	(14)	1901270
2357	9.2	0.0	1.0	chr19	54447616	54447920	(4169696)	C	AluSq2	SINE/Alu	(11)	302	1	1901776
560	29.0	4.6	5.0	chr19	54447921	54447969	(4169647)	+	L1MD3	LINE/L1	7948	7987	(8)	1901775
19	3.2	6.2	0.0	chr19	54447974	54448005	(4169611)	+	(CAAAAA)n	Simple_repeat	1	34	(0)	1901777
26	27.8	0.0	6.0	chr19	54465283	54465399	(4152217)	+	(GCGGCGG)n	Simple_repeat	1	117	(0)	1901794
3054	4.8	52.4	0.4	chr19	54998653	54999161	(3618455)	C	SVA_D	Retroposon/SVA	(20)	1366	624	1902760
1977	11.9	0.4	0.0	chr19	54999169	54999446	(3618170)	C	AluSp	SINE/Alu	(34)	279	1	1902761
17	15.5	0.0	0.0	chr19	55088806	55088834	(3528782)	+	(C)n	Simple_repeat	1	29	(0)	1902982
208	28.4	2.9	0.0	chr19	55089076	55089142	(3528474)	+	L2c	LINE/L2	3026	3094	(293)	1902983
688	30.4	8.0	7.0	chr19	55089366	55089994	(3527622)	+	L2a	LINE/L2	2615	3269	(157)	1902984
15	20.1	0.0	0.0	chr19	55146675	55146708	(3470908)	+	(CCT)n	Simple_repeat	1	34	(0)	1903104
15	22.7	0.0	0.0	chr19	55160495	55160526	(3457090)	+	GA-rich	Low_complexity	1	32	(0)	1903121
235	34.0	12.0	4.0	chr19	55257535	55257831	(3359785)	+	L2c	LINE/L2	3023	3346	(41)	1903325
16	26.1	0.0	3.5	chr19	55258521	55258578	(3359038)	+	G-rich	Low_complexity	1	58	(0)	1903326
18	32.9	3.2	0.0	chr19	55283867	55283960	(3333656)	+	(CCCTCCC)n	Simple_repeat	1	97	(0)	1903384
17	34.5	0.0	0.0	chr19	55284033	55284098	(3333518)	+	G-rich	Low_complexity	1	66	(0)	1903385
485	28.9	0.7	0.7	chr19	55301342	55301484	(3316132)	+	MIR	SINE/MIR	55	197	(65)	1903431
564	26.6	9.2	0.0	chr19	55338695	55338912	(3278704)	+	Tigger3c	DNA/TcMar-Tigger	363	602	(0)	1903538
16	4.5	0.0	0.0	chr19	55338918	55338940	(3278676)	+	(AAAC)n	Simple_repeat	1	23	(0)	1903539
589	10.8	7.6	0.1	chr19	55448013	55449159	(3168457)	+	(AC)n	Simple_repeat	1	1234	(0)	1903759
12	14.7	0.0	5.9	chr19	55451911	55451944	(3165672)	+	(CTGTGT)n	Simple_repeat	1	34	(0)	1903763
428	23.3	11.7	0.0	chr19	55461195	55461323	(3156293)	+	MIRc	SINE/MIR	41	186	(82)	1903779
13	20.0	2.0	5.8	chr19	55461724	55461774	(3155842)	+	(CTCTGC)n	Simple_repeat	1	52	(0)	1903780
19	27.4	0.0	2.9	chr19	55476818	55476886	(3140730)	+	G-rich	Low_complexity	1	69	(0)	1903814
16	12.7	0.0	5.3	chr19	55580750	55580787	(3036829)	+	G-rich	Low_complexity	1	38	(0)	1904073
12	13.2	9.3	2.1	chr19	55580979	55581021	(3036595)	+	G-rich	Low_complexity	1	47	(0)	1904074
268	16.9	4.4	5.8	chr19	55581165	55581233	(3036383)	C	L2a	LINE/L2	(0)	3426	3359	1904075
2423	8.2	0.3	1.3	chr19	55586460	55586774	(3030842)	C	AluSx1	SINE/Alu	(0)	312	1	1904096
765	30.1	8.3	4.9	chr19	55586775	55586970	(3030646)	+	L2a	LINE/L2	3220	3425	(1)	1904095
333	27.8	10.0	0.0	chr19	55643241	55643348	(2974268)	+	MIRb	SINE/MIR	34	153	(115)	1904223
230	27.7	0.0	4.1	chr19	55648720	55648817	(2968799)	+	MSR1	Satellite	1	94	(17)	1904231
659	25.4	3.6	0.5	chr19	55672422	55672611	(2945005)	C	MER20	DNA/hAT-Charlie	(23)	196	1	1904266
267	4.4	4.2	0.0	chr19	55672730	55672774	(2944842)	C	AluY	SINE/Alu	(3)	298	252	1904267
1238	8.5	0.0	1.8	chr19	55672775	55672942	(2944674)	C	AluY	SINE/Alu	(146)	165	1	1904267
432	27.3	5.7	1.5	chr19	56083598	56083731	(2533885)	+	MIRb	SINE/MIR	71	210	(58)	1905079
26	11.5	0.0	0.0	chr19	56083766	56083803	(2533813)	+	(G)n	Simple_repeat	1	38	(0)	1905080
347	28.0	9.9	1.7	chr19	56258279	56258398	(2359218)	C	L2b	LINE/L2	(9)	3366	3236	1905475
662	24.1	10.9	5.3	chr19	56258663	56259170	(2358446)	+	MLT1G1	LTR/ERVL-MaLR	11	563	(6)	1905476
1920	18.8	2.6	5.7	chr19	56309053	56309492	(2308124)	+	L1MB5	LINE/L1	5749	6174	(0)	1905595
200	29.7	0.0	1.5	chr19	56309563	56309627	(2307989)	+	L2c	LINE/L2	3282	3345	(42)	1905596
796	15.2	18.2	0.5	chr19	57632687	57632885	(984731)	C	Tigger2	DNA/TcMar-Tigger	(201)	2517	2276	1908073
400	13.4	0.0	8.2	chr19	57632879	57632951	(984665)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(999)	69	3	1908076
1658	15.2	6.6	0.0	chr19	58218908	58219177	(398439)	+	AluJo	SINE/Alu	1	289	(23)	1909120
1757	15.0	3.5	1.4	chr19	58219251	58219530	(398086)	+	AluSz	SINE/Alu	1	286	(26)	1909121
2206	12.8	0.0	0.0	chr19	58361351	58361656	(255960)	C	AluSx1	SINE/Alu	(6)	306	1	1909402
982	17.0	11.8	3.4	chr19	58361657	58361773	(255843)	+	L1MD1	LINE/L1	6122	6242	(0)	1909401
14	23.8	5.5	0.0	chr19	58558219	58558273	(59343)	+	(CCTCCGA)n	Simple_repeat	1	58	(0)	1909726
45	25.1	5.0	2.1	chr19	58558385	58558565	(59051)	+	(GCC)n	Simple_repeat	1	190	(0)	1909727
4567	16.4	11.9	5.2	chr2	3198531	3199525	(238994004)	C	MER11C	LTR/ERVK	(0)	1071	1	1914181
14	24.3	2.0	2.0	chr2	3575498	3575547	(238617982)	+	G-rich	Low_complexity	1	51	(0)	1914686
17	4.3	0.0	0.0	chr2	3651297	3651320	(238542209)	+	(TGGG)n	Simple_repeat	1	24	(0)	1914778
144	0.0	0.0	0.0	chr2	3651321	3651442	(238542087)	+	(GT)n	Simple_repeat	1	122	(0)	1914779
12	30.6	0.0	4.6	chr2	8583900	8583964	(233609565)	+	(GCCCC)n	Simple_repeat	1	65	(0)	1921598
14	23.3	0.0	0.0	chr2	8677866	8677905	(233515624)	+	(CCCCCCA)n	Simple_repeat	1	40	(0)	1921723
16	0.0	0.0	0.0	chr2	8684538	8684555	(233508974)	+	(CA)n	Simple_repeat	1	18	(0)	1921732
15	4.5	0.0	4.0	chr2	9310768	9310792	(232882737)	+	(CCA)n	Simple_repeat	1	25	(0)	1922752
215	30.1	9.8	9.8	chr2	9386750	9386903	(232806626)	C	MIR3	SINE/MIR	(96)	172	19	1922853
2428	5.2	0.0	3.3	chr2	9386923	9387227	(232806302)	+	AluY	SINE/Alu	1	295	(16)	1922854
857	21.9	7.2	4.2	chr2	9387250	9387463	(232806066)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	1922855
31	2.8	2.7	0.0	chr2	9556318	9556354	(232637175)	+	(CCCCGAG)n	Simple_repeat	1	38	(0)	1923168
411	25.6	9.6	5.9	chr2	10031336	10031505	(232162024)	+	MIRb	SINE/MIR	84	260	(8)	1924043
2153	10.0	4.0	0.0	chr2	10031710	10031999	(232161530)	C	AluSx1	SINE/Alu	(9)	303	2	1924044
1721	16.0	7.7	1.7	chr2	10283838	10284130	(231909399)	+	AluJo	SINE/Alu	1	312	(0)	1924511
750	17.7	0.8	0.0	chr2	10813504	10813627	(231379902)	C	AluJo	SINE/Alu	(54)	258	134	1925523
53	0.0	0.0	0.0	chr2	11132998	11133042	(231060487)	+	(CA)n	Simple_repeat	1	45	(0)	1926079
1825	12.7	6.2	2.0	chr2	11466438	11466729	(230726800)	C	AluJo	SINE/Alu	(7)	305	1	1926688
12	7.0	10.0	0.0	chr2	11779225	11779254	(230414275)	+	(TTTCTC)n	Simple_repeat	1	33	(0)	1927245
253	18.2	0.0	0.0	chr2	11809767	11809810	(230383719)	+	MER124	DNA?	120	163	(234)	1927289
431	29.1	4.8	5.3	chr2	11809824	11810012	(230383517)	+	MIR3	SINE/MIR	14	201	(7)	1927290
248	33.3	11.8	2.5	chr2	11810097	11810505	(230383024)	C	L2c	LINE/L2	(38)	3388	2910	1927291
14	15.4	5.6	0.0	chr2	11830175	11830210	(230363319)	+	(GTGA)n	Simple_repeat	1	38	(0)	1927316
261	14.6	7.3	12.8	chr2	12715650	12715751	(229477778)	+	MER94	DNA/hAT-Blackjack	26	121	(13)	1928767
22	22.1	3.9	2.5	chr2	12716827	12716903	(229476626)	+	G-rich	Low_complexity	1	80	(0)	1928768
18	27.6	1.9	0.0	chr2	12716941	12716992	(229476537)	+	(CG)n	Simple_repeat	1	53	(0)	1928769
16	20.9	0.0	0.0	chr2	12717603	12717635	(229475894)	+	(T)n	Simple_repeat	1	33	(0)	1928770
1923	10.0	0.0	0.4	chr2	15592939	15593188	(226600341)	C	AluSx1	SINE/Alu	(30)	282	34	1932983
14	19.3	2.3	2.3	chr2	16625148	16625190	(225568339)	+	G-rich	Low_complexity	1	44	(0)	1934805
13	16.5	8.2	1.9	chr2	17753811	17753859	(224439670)	+	(GCGCCT)n	Simple_repeat	1	53	(0)	1936458
25	20.3	1.5	2.9	chr2	20350704	20350770	(221842759)	+	(TCC)n	Simple_repeat	1	68	(0)	1940192
11	20.8	6.8	0.0	chr2	20823252	20823295	(221370234)	+	(TTTTCA)n	Simple_repeat	1	47	(0)	1940916
2191	13.2	0.0	0.0	chr2	23927894	23928196	(218265333)	+	AluSx1	SINE/Alu	1	303	(9)	1945111
15	5.6	0.0	0.0	chr2	25252770	25252788	(216940741)	+	(A)n	Simple_repeat	1	19	(0)	1947593
17	6.5	2.9	2.9	chr2	25522351	25522384	(216671145)	+	(AAAACC)n	Simple_repeat	1	35	(0)	1948069
417	27.6	7.9	0.0	chr2	25522434	25522549	(216670980)	C	L2a	LINE/L2	(0)	3426	3301	1948070
23	16.2	2.0	0.0	chr2	26033766	26033814	(216159715)	+	G-rich	Low_complexity	1	50	(0)	1949188
269	26.5	16.2	1.9	chr2	26787802	26788085	(215405444)	C	L1M5	LINE/L1	(1840)	4306	3965	1950615
189	32.7	0.0	0.0	chr2	26788099	26788150	(215405379)	+	L2	LINE/L2	1339	1390	(2029)	1950616
1015	18.9	0.5	3.2	chr2	26788152	26788341	(215405188)	C	AluJb	SINE/Alu	(16)	296	112	1950617
279	24.5	2.0	3.9	chr2	26788407	26788508	(215405021)	+	L2	LINE/L2	1395	1494	(1925)	1950616
17	7.0	3.3	0.0	chr2	27071533	27071562	(215121967)	+	(CCACGG)n	Simple_repeat	1	31	(0)	1951129
16	22.3	4.0	5.1	chr2	27071773	27071847	(215121682)	+	(GGCTGG)n	Simple_repeat	1	78	(0)	1951130
1718	12.2	3.2	1.8	chr2	27279317	27279595	(214913934)	C	AluSz	SINE/Alu	(28)	284	2	1951499
1772	17.9	0.0	3.5	chr2	27279630	27279948	(214913581)	+	AluJb	SINE/Alu	1	308	(4)	1951500
19	11.1	2.3	2.3	chr2	27279949	27279983	(214913546)	+	GA-rich	Low_complexity	7	42	(0)	1951501
1618	14.2	13.3	0.7	chr2	27665972	27666254	(214527275)	+	MER33	DNA/hAT-Charlie	1	324	(0)	1952213
845	9.2	0.8	15.0	chr2	27666275	27666427	(214527102)	C	AluSx3	SINE/Alu	(176)	135	5	1952214
190	21.4	0.0	0.0	chr2	27666443	27666484	(214527045)	+	L3	LINE/CR1	1078	1119	(2980)	1952215
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
25	27.4	4.2	0.0	chr2	28392892	28392933	(213800596)	+	(CGAG)n	Simple_repeat	1	71	(29)	1953485
23	11.2	0.0	0.0	chr2	28392934	28392972	(213800557)	+	(GAGAGA)n	Simple_repeat	1	39	(0)	1953486
25	27.4	4.2	0.0	chr2	28392973	28392987	(213800542)	+	(CGAG)n	Simple_repeat	72	100	(0)	1953485
2034	15.3	7.5	4.3	chr2	28583485	28583822	(213609707)	+	Tigger4	DNA/TcMar-Tigger	59	411	(2320)	1953816
459	16.5	1.2	0.0	chr2	28583835	28583919	(213609610)	+	Tigger4a	DNA/TcMar-Tigger	151	236	(0)	1953818
195	26.1	5.5	1.4	chr2	28584145	28584214	(213609315)	+	L2b	LINE/L2	3303	3375	(0)	1953819
290	30.4	1.9	2.9	chr2	28584722	28584826	(213608703)	C	MamRTE1	LINE/RTE-BovB	(3574)	238	135	1953820
2265	6.5	2.3	3.6	chr2	28894281	28894422	(213299107)	C	AluSp	SINE/Alu	(173)	140	1	1954452
2393	3.1	3.7	1.7	chr2	32278981	32279271	(209914258)	C	AluY	SINE/Alu	(14)	297	1	1959943
29	4.1	8.0	0.0	chr2	32358025	32358078	(209835451)	+	(GTGGGG)n	Simple_repeat	1	58	(0)	1960157
5427	11.9	1.8	3.2	chr2	32713763	32714163	(209479366)	C	L1PA15	LINE/L1	(2)	6163	5784	1960845
2435	8.5	0.0	0.0	chr2	32714164	32714457	(209479072)	C	AluY	SINE/Alu	(17)	294	1	1960846
5427	11.3	2.2	1.4	chr2	32714458	32715518	(209478011)	C	L1PA15	LINE/L1	(382)	5783	4708	1960845
14	0.0	0.0	0.0	chr2	37324616	37324633	(204868896)	+	(GCG)n	Simple_repeat	1	18	(0)	1967537
13	17.8	5.3	0.0	chr2	37324772	37324809	(204868720)	+	(TCCC)n	Simple_repeat	1	40	(0)	1967538
232	18.3	0.0	0.0	chr2	37344212	37344256	(204849273)	+	MIR1_Amn	SINE/MIR	118	160	(48)	1967577
1741	26.8	4.1	4.9	chr2	38392316	38392387	(203801142)	C	MLT1L	LTR/ERVL-MaLR	(4)	606	544	1969129
2380	6.5	0.3	3.2	chr2	38392388	38392697	(203800832)	+	AluSx4	SINE/Alu	1	301	(9)	1969130
1741	26.8	4.1	4.9	chr2	38392698	38393233	(203800296)	C	MLT1L	LTR/ERVL-MaLR	(67)	543	3	1969129
1649	7.3	0.5	0.0	chr2	38536547	38536750	(203656779)	+	AluSx	SINE/Alu	103	307	(5)	1969427
416	25.6	10.6	3.0	chr2	38536814	38536978	(203656551)	+	MIR	SINE/MIR	22	200	(62)	1969428
25	32.5	4.3	0.8	chr2	38536981	38537096	(203656433)	+	(AT)n	Simple_repeat	1	121	(0)	1969429
1673	19.7	4.2	10.3	chr2	42186789	42187061	(200006468)	C	L1ME1	LINE/L1	(2)	6177	5949	1975104
1807	17.2	0.3	1.8	chr2	42187062	42187346	(200006183)	C	AluJo	SINE/Alu	(30)	282	2	1975105
1673	19.7	4.2	10.3	chr2	42187347	42187604	(200005925)	C	L1ME1	LINE/L1	(231)	5948	5680	1975104
1771	15.7	2.7	0.7	chr2	42197074	42197359	(199996170)	C	AluJb	SINE/Alu	(16)	296	5	1975128
18	27.4	2.8	1.4	chr2	42568560	42568631	(199624898)	+	(CCCCT)n	Simple_repeat	1	74	(0)	1975882
34	23.4	1.9	2.8	chr2	42568639	42568743	(199624786)	+	(GGC)n	Simple_repeat	1	107	(0)	1975883
13	14.7	0.0	3.1	chr2	42568923	42568958	(199624571)	+	(CTCCC)n	Simple_repeat	1	34	(0)	1975884
18	10.4	0.0	0.0	chr2	42569189	42569219	(199624310)	+	(GGGGTG)n	Simple_repeat	1	31	(0)	1975885
29	0.0	0.0	0.0	chr2	42927945	42927969	(199265560)	+	(GT)n	Simple_repeat	1	25	(0)	1976562
435	23.7	5.6	2.2	chr2	42967877	42968014	(199225515)	C	MIRc	SINE/MIR	(122)	146	4	1976638
408	22.1	0.0	0.0	chr2	43022380	43022456	(199171073)	+	Tigger16a	DNA/TcMar-Tigger	105	181	(776)	1976731
684	31.7	7.9	3.7	chr2	43022729	43023163	(199170366)	+	Tigger16a	DNA/TcMar-Tigger	503	957	(0)	1976732
17	19.2	2.8	0.0	chr2	43169457	43169492	(199024037)	+	(GT)n	Simple_repeat	1	37	(0)	1977028
214	26.9	0.0	0.0	chr2	43169932	43169983	(199023546)	+	MIRb	SINE/MIR	115	166	(102)	1977029
15	5.5	0.0	0.0	chr2	43223992	43224010	(198969519)	+	(T)n	Simple_repeat	1	19	(0)	1977140
4750	12.5	3.2	1.6	chr2	43724874	43725637	(198467892)	C	LTR19C	LTR/ERV1	(0)	779	3	1977965
33	5.6	0.0	0.0	chr2	45651060	45651096	(196542433)	+	(CA)n	Simple_repeat	1	37	(0)	1981029
22	16.0	8.8	2.3	chr2	45651173	45651252	(196542277)	+	(GGCGAGC)n	Simple_repeat	1	87	(0)	1981030
781	26.6	3.2	2.0	chr2	46098186	46098434	(196095095)	+	MIR	SINE/MIR	11	262	(0)	1981732
14	15.4	5.6	0.0	chr2	46341974	46342009	(195851520)	+	(CCAC)n	Simple_repeat	1	38	(0)	1982109
843	18.5	8.0	0.0	chr2	46342039	46342200	(195851329)	+	MER5B	DNA/hAT-Charlie	3	178	(0)	1982110
1607	22.1	3.9	10.0	chr2	46427927	46428534	(195764995)	+	L1M5	LINE/L1	3176	3744	(2402)	1982238
230	26.8	1.8	1.8	chr2	46428722	46428778	(195764751)	C	MER5B	DNA/hAT-Charlie	(85)	93	37	1982239
25404	8.0	0.8	1.2	chr2	46472059	46478113	(195715416)	C	L1PA5	LINE/L1	(7)	6147	124	1982316
211	31.9	14.7	4.1	chr2	46478114	46478283	(195715246)	C	MIRc	SINE/MIR	(63)	205	15	1982317
1748	15.1	8.2	12.5	chr2	46478379	46478544	(195714985)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	257	1982318
17	0.0	0.0	0.0	chr2	46542196	46542214	(195651315)	+	(T)n	Simple_repeat	1	19	(0)	1982425
18	11.6	3.7	7.1	chr2	46542456	46542509	(195651020)	+	(CTC)n	Simple_repeat	1	56	(0)	1982426
17	4.9	0.0	0.0	chr2	46915807	46915865	(195277664)	+	(C)n	Simple_repeat	1	59	(0)	1983050
2139	12.8	0.0	0.3	chr2	47334502	47334799	(194858730)	C	AluSx	SINE/Alu	(14)	298	2	1983837
315	31.8	1.9	2.6	chr2	47334908	47335062	(194858467)	+	LTR88a	LTR/Gypsy?	653	806	(10)	1983838
1825	0.0	0.0	0.0	chr2	47335315	47335514	(194858015)	+	BC200	scRNA	1	200	(0)	1983839
12	16.8	0.0	0.0	chr2	47783895	47783921	(194409608)	+	G-rich	Low_complexity	1	27	(0)	1984799
48	0.0	0.0	0.0	chr2	47904582	47904622	(194288907)	+	(AC)n	Simple_repeat	1	41	(0)	1985040
12	24.1	0.0	0.0	chr2	47906000	47906033	(194287496)	+	GA-rich	Low_complexity	1	34	(0)	1985043
18	0.0	0.0	0.0	chr2	47906067	47906089	(194287440)	+	(GCG)n	Simple_repeat	1	23	(0)	1985044
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
18	14.2	10.6	0.0	chr2	47906280	47906326	(194287203)	+	(TC)n	Simple_repeat	1	52	(0)	1985046
18	25.1	3.3	0.0	chr2	47906520	47906580	(194286949)	+	G-rich	Low_complexity	1	63	(0)	1985047
7930	11.0	4.1	5.0	chr2	48144044	48145079	(194048450)	C	L1PB1	LINE/L1	(4734)	2129	1094	1985447
330	36.1	4.0	4.4	chr2	48145127	48145355	(194048174)	+	L1MD	LINE/L1	2845	3072	(3074)	1985451
385	28.5	5.4	2.5	chr2	48946880	48947044	(193246485)	+	MIRc	SINE/MIR	6	175	(87)	1986768
17	24.0	0.0	6.1	chr2	53970798	53970863	(188222666)	+	(CCTCCC)n	Simple_repeat	1	66	(0)	1993469
19	16.7	7.4	0.0	chr2	53971071	53971124	(188222405)	+	(CGG)n	Simple_repeat	1	58	(0)	1993470
349	31.4	2.1	3.5	chr2	54569653	54569797	(187623732)	+	MIRb	SINE/MIR	105	247	(21)	1994577
32	21.9	1.3	0.0	chr2	55050129	55050207	(187143322)	+	(TCCTCC)n	Simple_repeat	1	80	(0)	1995181
13	21.7	0.0	0.0	chr2	55050321	55050352	(187143177)	+	(GCC)n	Simple_repeat	1	32	(0)	1995182
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
17	13.7	0.0	0.0	chr2	61017811	61017842	(181175687)	+	(CCGGGA)n	Simple_repeat	1	32	(0)	2003500
12	26.8	0.0	8.9	chr2	61065894	61065972	(181127557)	+	G-rich	Low_complexity	1	79	(0)	2003591
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
16	16.8	7.3	1.7	chr2	61177366	61177378	(181016151)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	2003842
19	11.6	0.0	4.9	chr2	61177379	61177419	(181016110)	+	G-rich	Low_complexity	1	41	(0)	2003843
13	21.0	4.5	0.0	chr2	61470531	61470574	(180722955)	+	(CCGCCCG)n	Simple_repeat	1	46	(0)	2004393
13	18.8	0.0	5.0	chr2	61471025	61471035	(180722494)	+	(CACCGC)n	Simple_repeat	1	39	(0)	2004394
16	11.6	0.0	0.0	chr2	61471036	61471063	(180722466)	+	(CGC)n	Simple_repeat	1	28	(0)	2004395
17	25.1	0.0	0.0	chr2	61538196	61538242	(180655287)	+	(GCTGCC)n	Simple_repeat	1	47	(0)	2004523
13	20.4	0.0	2.8	chr2	61694805	61694840	(180498689)	+	G-rich	Low_complexity	1	36	(0)	2004962
22	10.1	0.0	0.0	chr2	61695282	61695313	(180498216)	+	(T)n	Simple_repeat	1	32	(0)	2004963
14	14.9	9.2	4.2	chr2	62296756	62296820	(179896709)	+	G-rich	Low_complexity	1	71	(0)	2006212
25	17.5	0.0	0.0	chr2	62296868	62296912	(179896617)	+	(TC)n	Simple_repeat	1	45	(0)	2006213
15	23.4	6.9	1.6	chr2	62412128	62412185	(179781344)	+	GA-rich	Low_complexity	1	62	(0)	2006479
108	9.8	0.0	0.0	chr2	62412298	62412452	(179781077)	+	(TC)n	Simple_repeat	1	155	(0)	2006480
18	16.2	0.0	4.4	chr2	64750110	64750154	(177443375)	+	GA-rich	Low_complexity	1	45	(0)	2009874
22	3.6	0.0	0.0	chr2	64750746	64750774	(177442755)	+	(GAG)n	Simple_repeat	1	29	(0)	2009875
18	6.3	2.7	5.3	chr2	64750840	64750876	(177442653)	+	(GGC)n	Simple_repeat	1	38	(0)	2009876
13	20.9	0.0	0.0	chr2	64858996	64859028	(177334501)	+	(TTTGC)n	Simple_repeat	1	33	(0)	2010075
184	29.6	5.8	1.0	chr2	64859572	64859670	(177333859)	C	MIRb	SINE/MIR	(124)	144	41	2010076
623	37.8	5.6	1.6	chr2	64987089	64987464	(177206065)	C	L2	LINE/L2	(652)	2767	2376	2010343
18	12.0	0.0	0.0	chr2	64987636	64987662	(177205867)	+	(C)n	Simple_repeat	1	27	(0)	2010345
418	20.0	0.0	1.2	chr2	64987915	64987994	(177205535)	+	FLAM_A	SINE/Alu	54	132	(10)	2010346
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
15	31.6	0.0	2.9	chr2	65436156	65436189	(176757340)	+	(CGCCC)n	Simple_repeat	1	68	(0)	2011239
13	13.6	2.9	2.9	chr2	65436190	65436223	(176757306)	+	(CCCCCG)n	Simple_repeat	1	35	(0)	2011240
21	21.4	0.0	0.0	chr2	66574408	66574450	(175619079)	+	G-rich	Low_complexity	1	43	(0)	2012925
33	24.8	6.1	0.8	chr2	66575335	66575449	(175618080)	+	(TC)n	Simple_repeat	1	122	(0)	2012928
21	7.5	0.0	0.0	chr2	66579938	66579965	(175613564)	+	(GA)n	Simple_repeat	1	28	(0)	2012929
32	7.8	0.0	0.0	chr2	68253597	68253637	(173939892)	+	(GT)n	Simple_repeat	1	41	(0)	2015307
17	15.9	0.0	0.0	chr2	68253860	68253894	(173939635)	+	(CTCT)n	Simple_repeat	1	35	(0)	2015308
15	12.4	5.7	0.0	chr2	68253898	68253932	(173939597)	+	(CCTCC)n	Simple_repeat	1	37	(0)	2015309
298	31.6	3.6	0.8	chr2	69305299	69305432	(172888097)	+	LTR104_Mam	LTR/Gypsy	1049	1186	(323)	2016830
15	19.5	0.0	0.0	chr2	69305550	69305584	(172887945)	+	G-rich	Low_complexity	1	35	(0)	2016831
47	0.0	0.0	0.0	chr2	69640015	69640054	(172553475)	+	(AC)n	Simple_repeat	1	40	(0)	2017435
24	0.0	0.0	0.0	chr2	69640055	69640080	(172553449)	+	(TC)n	Simple_repeat	1	26	(0)	2017436
491	23.1	18.2	2.0	chr2	69640122	69640204	(172553325)	C	MIRb	SINE/MIR	(0)	262	145	2017437
444	20.7	23.3	0.0	chr2	69640205	69640349	(172553180)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2017438
491	23.2	18.2	2.0	chr2	69640350	69640482	(172553047)	C	MIRb	SINE/MIR	(116)	152	2	2017437
16	0.0	0.0	0.0	chr2	69644166	69644182	(172549347)	+	(C)n	Simple_repeat	1	17	(0)	2017442
2726	6.0	0.0	0.0	chr2	69913673	69913973	(172279556)	+	AluSq2	SINE/Alu	1	301	(12)	2017996
1271	24.1	6.4	3.2	chr2	69934494	69934900	(172258629)	C	L1ME4b	LINE/L1	(31)	861	441	2018026
569	21.1	0.0	0.0	chr2	70108467	70108570	(172084959)	C	MER5B	DNA/hAT-Charlie	(74)	104	1	2018397
19	21.5	4.1	0.0	chr2	70108905	70108953	(172084576)	+	(TG)n	Simple_repeat	1	51	(0)	2018398
2000	13.1	0.7	0.3	chr2	70123689	70123986	(172069543)	+	AluJo	SINE/Alu	2	300	(12)	2018441
481	32.7	1.8	2.9	chr2	70141286	70141455	(172052074)	+	MIRb	SINE/MIR	78	245	(23)	2018485
12	13.9	6.2	0.0	chr2	70303912	70303943	(171889586)	+	(TTGAA)n	Simple_repeat	1	34	(0)	2018837
2238	10.4	0.0	2.9	chr2	70304156	70304462	(171889067)	+	AluSx1	SINE/Alu	5	302	(10)	2018838
1075	14.4	1.0	11.3	chr2	70336453	70336674	(171856855)	+	AluJo	SINE/Alu	102	300	(12)	2018919
1000	18.8	2.3	2.7	chr2	71994760	71994978	(170198551)	+	MER20	DNA/hAT-Charlie	2	219	(0)	2021427
306	19.1	1.2	5.6	chr2	71995011	71995099	(170198430)	C	MLT1L	LTR/ERVL-MaLR	(499)	111	27	2021426
605	24.2	3.0	2.4	chr2	71995159	71995323	(170198206)	C	MER91B	DNA/hAT-Tip100	(0)	190	25	2021428
855	33.8	5.1	3.0	chr2	71995351	71995755	(170197774)	+	L3	LINE/CR1	3448	3861	(238)	2021425
11	13.0	8.8	0.0	chr2	73070665	73070698	(169122831)	+	(GCGCTCC)n	Simple_repeat	1	37	(0)	2023053
51	2.0	0.0	0.0	chr2	73385904	73385953	(168807576)	+	(GGA)n	Simple_repeat	1	50	(0)	2023645
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
12	29.6	0.0	2.0	chr2	73926539	73926589	(168266940)	+	(AATTTT)n	Simple_repeat	1	51	(0)	2024463
490	30.3	5.9	4.2	chr2	74002092	74002308	(168191221)	+	MIR	SINE/MIR	9	229	(33)	2024612
18	4.8	0.0	0.0	chr2	74003425	74003446	(168190083)	+	(T)n	Simple_repeat	1	22	(0)	2024614
12	25.4	0.0	5.8	chr2	74003539	74003590	(168189939)	+	G-rich	Low_complexity	1	52	(0)	2024615
270	36.7	5.2	5.0	chr2	74572024	74572164	(167621365)	+	L3	LINE/CR1	2425	2568	(1531)	2025566
214	20.9	2.3	0.0	chr2	74572271	74572313	(167621216)	+	MIRb	SINE/MIR	26	69	(199)	2025584
1621	17.2	1.9	0.0	chr2	74572348	74572608	(167620921)	C	AluJo	SINE/Alu	(34)	278	13	2025585
699	26.0	2.9	2.9	chr2	74572614	74572819	(167620710)	+	MIRb	SINE/MIR	61	266	(2)	2025584
12	18.1	2.4	4.8	chr2	74715401	74715441	(167478088)	+	(CGCGG)n	Simple_repeat	1	42	(0)	2025835
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
278	25.7	11.4	5.1	chr2	84881924	84882079	(157311450)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	1	2039573
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
1132	24.9	6.2	9.7	chr2	85468972	85469165	(156724364)	+	L1ME3E	LINE/L1	5680	5852	(390)	2040834
1806	12.2	6.1	0.4	chr2	85469166	85469427	(156724102)	C	AluSz	SINE/Alu	(34)	278	1	2040835
1132	24.9	6.2	9.7	chr2	85469428	85469695	(156723834)	+	L1ME3E	LINE/L1	5853	6115	(127)	2040834
1152	16.6	6.6	1.2	chr2	88001427	88001670	(154191859)	C	MER58D	DNA/hAT-Charlie	(0)	386	129	2045094
253	34.4	1.6	2.3	chr2	88001756	88001883	(154191646)	C	LTR41	LTR/ERVL	(132)	626	500	2045095
16	9.7	0.0	7.7	chr2	88001885	88001923	(154191606)	+	(GGACAC)n	Simple_repeat	1	39	(0)	2045096
410	24.5	9.8	2.1	chr2	88001967	88002123	(154191406)	C	LTR41	LTR/ERVL	(616)	179	1	2045095
2318	11.7	0.0	0.0	chr2	88002195	88002503	(154191026)	+	AluSg	SINE/Alu	2	310	(0)	2045097
239	28.9	7.8	1.8	chr2	96637905	96638061	(145555468)	C	MIRc	SINE/MIR	(72)	196	27	2052487
21	23.3	1.2	5.9	chr2	96638090	96638178	(145555351)	+	(GGCCC)n	Simple_repeat	1	84	(0)	2052488
14	25.8	1.7	3.3	chr2	96869369	96869427	(145324102)	+	(CGGCC)n	Simple_repeat	1	60	(0)	2052932
12	12.5	0.0	3.6	chr2	96869468	96869495	(145324034)	+	G-rich	Low_complexity	1	28	(0)	2052933
2222	20.5	6.4	3.0	chr2	98422027	98422795	(143770734)	+	L1M4b	LINE/L1	1391	2362	(710)	2054999
2191	12.9	0.0	1.6	chr2	98422796	98423106	(143770423)	+	AluSx	SINE/Alu	2	307	(5)	2055000
12	11.9	0.0	6.5	chr2	99489774	99489804	(142703725)	+	(CCCGC)n	Simple_repeat	1	31	(0)	2056542
1048	19.2	3.2	4.9	chr2	103292565	103292789	(138900740)	C	MER106A	DNA/hAT-Charlie	(15)	221	1	2062143
2477	15.2	4.3	4.2	chr2	105121984	105122759	(137070770)	C	L1MD	LINE/L1	(642)	5717	4932	2064427
19	22.6	4.2	4.0	chr2	105329279	105329350	(136864179)	+	(AC)n	Simple_repeat	1	75	(0)	2064762
43	29.4	2.9	2.9	chr2	105329455	105329658	(136863871)	+	(CCCCCCG)n	Simple_repeat	1	210	(0)	2064763
491	7.6	0.0	2.8	chr2	105329667	105329774	(136863755)	C	LTR2752	LTR/ERV1	(567)	696	592	2064764
2147	10.4	3.2	2.6	chr2	106067012	106067320	(136126209)	+	AluSp	SINE/Alu	1	311	(2)	2065866
185	31.1	6.2	3.2	chr2	108450016	108450108	(133743421)	+	MIR3	SINE/MIR	111	206	(2)	2069254
498	27.3	6.7	0.7	chr2	108450121	108450275	(133743254)	C	MIR	SINE/MIR	(8)	254	90	2069255
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
24	2.5	7.0	2.2	chr2	108534653	108534695	(133658834)	+	(CGGGC)n	Simple_repeat	1	46	(0)	2069393
2167	22.4	8.0	4.6	chr2	108787226	108787981	(133405548)	C	L1MC4	LINE/L1	(3)	8039	7271	2069807
6500	12.7	5.2	0.8	chr2	111619436	111620506	(130573023)	+	Tigger3b	DNA/TcMar-Tigger	111	1231	(0)	2073771
670	19.9	3.0	1.5	chr2	113888918	113889050	(128304479)	+	MER5A	DNA/hAT-Charlie	48	182	(7)	2077573
755	14.8	0.0	7.4	chr2	113889082	113889216	(128304313)	C	AluJr	SINE/Alu	(187)	125	1	2077574
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
182	31.3	2.5	8.0	chr2	120223941	120224065	(121969464)	C	MIRc	SINE/MIR	(134)	134	17	2086607
184	29.6	24.4	0.0	chr2	120227331	120227482	(121966047)	+	MIRb	SINE/MIR	28	228	(40)	2086611
246	28.6	3.9	8.4	chr2	120227569	120227675	(121965854)	+	L2c	LINE/L2	3257	3358	(29)	2086612
300	25.9	15.6	3.6	chr2	121336163	121336330	(120857199)	C	MIRb	SINE/MIR	(41)	227	36	2088550
1877	13.3	0.3	2.3	chr2	121650282	121650581	(120542948)	C	AluJb	SINE/Alu	(18)	294	1	2089036
245	31.2	0.0	2.5	chr2	126673551	126673629	(115519900)	C	MIRc	SINE/MIR	(145)	123	47	2096220
18	24.6	4.1	2.6	chr2	126673768	126673785	(115519744)	+	(CATGCA)n	Simple_repeat	1	40	(36)	2096221
24	16.9	0.0	0.0	chr2	126673786	126673826	(115519703)	+	(AC)n	Simple_repeat	1	41	(0)	2096222
18	24.6	4.1	2.6	chr2	126673827	126673840	(115519689)	+	(CATGCA)n	Simple_repeat	41	76	(0)	2096221
372	30.2	11.9	1.8	chr2	127100886	127101050	(115092479)	C	MIRb	SINE/MIR	(70)	198	15	2096874
13	20.6	2.0	5.9	chr2	127101116	127101165	(115092364)	+	(CCT)n	Simple_repeat	1	51	(0)	2096875
564	30.1	6.7	2.1	chr2	127101345	127101651	(115091878)	+	L2a	LINE/L2	3058	3425	(1)	2096876
13	10.0	5.9	2.8	chr2	127174448	127174481	(115019048)	+	(CCCACT)n	Simple_repeat	1	36	(0)	2097001
209	26.2	0.0	0.0	chr2	127174553	127174594	(115018935)	+	L2b	LINE/L2	3333	3374	(1)	2097002
331	32.8	9.6	2.6	chr2	127174598	127174791	(115018738)	+	MIRb	SINE/MIR	54	262	(6)	2097003
2672	7.9	17.0	10.6	chr2	128053630	128054111	(114139418)	C	LTR12F	LTR/ERV1	(0)	519	1	2098553
11610	9.4	0.3	2.4	chr2	128054112	128054562	(114138967)	C	L1PB1	LINE/L1	(6174)	688	253	2098547
3684	10.2	1.2	0.0	chr2	128054592	128054922	(114138607)	+	HSMAR1	DNA/TcMar-Mariner	782	1118	(169)	2098554
17	10.0	3.1	0.0	chr2	128322219	128322270	(113871259)	+	(GGCCCC)n	Simple_repeat	1	53	(0)	2099035
233	23.1	0.0	0.0	chr2	130181936	130181987	(112011542)	C	L2b	LINE/L2	(12)	3363	3312	2101458
6856	21.8	7.1	6.0	chr2	131208488	131210470	(110983059)	+	REP522	Satellite/telo	1	2004	(0)	2103014
238	23.1	0.0	0.0	chr2	131492673	131492724	(110700805)	+	L2b	LINE/L2	3312	3363	(12)	2103372
381	37.8	4.7	2.6	chr2	137838297	137838524	(104355005)	C	MIRb	SINE/MIR	(4)	264	32	2112598
12	30.9	1.6	1.6	chr2	144516844	144516904	(97676625)	+	(CCGCCC)n	Simple_repeat	1	62	(0)	2121494
19	22.7	4.5	4.3	chr2	144516939	144517027	(97676502)	+	G-rich	Low_complexity	1	93	(0)	2121495
15	0.0	0.0	0.0	chr2	144517172	144517190	(97676339)	+	(CGC)n	Simple_repeat	1	19	(0)	2121496
42	13.6	2.3	2.3	chr2	144520396	144520481	(97673048)	+	(CCTC)n	Simple_repeat	1	88	(0)	2121497
14	14.4	1.8	8.9	chr2	144522234	144522288	(97671241)	+	(ATTTTAT)n	Simple_repeat	1	56	(0)	2121498
15	13.7	0.0	0.0	chr2	144524562	144524585	(97668944)	+	(G)n	Simple_repeat	1	24	(0)	2121500
12	4.5	4.0	3.9	chr2	148020984	148021008	(94172521)	+	(TCC)n	Simple_repeat	1	26	(0)	2126016
62	5.8	0.0	0.0	chr2	148021452	148021524	(94172005)	+	(TGC)n	Simple_repeat	1	73	(0)	2126017
22	10.2	4.8	0.0	chr2	148021578	148021619	(94171910)	+	(CTC)n	Simple_repeat	1	44	(0)	2126018
336	17.2	0.0	1.7	chr2	148501450	148501508	(93692021)	+	MamRep1879	DNA/hAT-Tip100?	74	131	(85)	2126694
539	24.5	14.7	2.4	chr2	148501848	148502056	(93691473)	C	MIRb	SINE/MIR	(28)	240	2	2126695
1719	14.8	1.3	7.6	chr2	148635279	148635608	(93557921)	+	AluJr4	SINE/Alu	2	310	(2)	2126920
22	0.0	0.0	0.0	chr2	148656002	148656025	(93537504)	+	(TG)n	Simple_repeat	1	24	(0)	2126953
831	24.4	6.3	2.0	chr2	148744423	148744727	(93448802)	+	L1ME4a	LINE/L1	5798	6116	(8)	2127082
238	38.8	1.9	0.0	chr2	148745260	148745362	(93448167)	C	L3	LINE/CR1	(1414)	2685	2581	2127083
13	16.3	2.8	2.7	chr2	148815707	148815742	(93377787)	+	(CTCCC)n	Simple_repeat	1	37	(0)	2127184
774	18.4	5.3	10.1	chr2	148815865	148816063	(93377466)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2127185
31	16.9	2.6	2.5	chr2	149280390	149280466	(92913063)	+	A-rich	Low_complexity	1	79	(0)	2127856
187	21.7	11.5	0.0	chr2	149280865	149280910	(92912619)	+	MIRc	SINE/MIR	22	73	(195)	2127857
2471	7.4	2.3	0.7	chr2	149281000	149281296	(92912233)	C	AluSx1	SINE/Alu	(10)	302	1	2127858
15	24.1	1.4	6.8	chr2	151828341	151828412	(90365117)	+	(GCC)n	Simple_repeat	1	73	(0)	2131422
13	13.0	0.0	3.6	chr2	152717632	152717659	(89475870)	+	GA-rich	Low_complexity	1	28	(0)	2132825
17	4.9	0.0	0.0	chr2	156333341	156333361	(85860168)	+	(TC)n	Simple_repeat	1	21	(0)	2137289
20	17.5	0.0	2.1	chr2	156334441	156334490	(85859039)	+	(TGCCGC)n	Simple_repeat	1	48	(0)	2137290
16	19.8	0.0	8.2	chr2	156334527	156334587	(85858942)	+	G-rich	Low_complexity	1	61	(0)	2137291
302	28.3	7.8	0.0	chr2	157260920	157261025	(84932504)	C	MIR3	SINE/MIR	(73)	135	21	2138505
30	5.5	2.6	0.0	chr2	157875485	157875522	(84318007)	+	(CA)n	Simple_repeat	1	39	(0)	2139333
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
832	28.1	6.6	8.9	chr2	166357208	166357326	(75836203)	C	L1ME4b	LINE/L1	(458)	434	324	2150911
3313	14.6	2.4	0.4	chr2	166357332	166357869	(75835660)	+	LTR73	LTR/ERV1	1	549	(23)	2150913
22061	10.5	3.0	1.1	chr2	167844236	167849605	(74343924)	+	L1PB1	LINE/L1	6	5731	(1131)	2152700
13	28.1	0.0	0.0	chr2	168455786	168455829	(73737700)	+	(CCTTCCC)n	Simple_repeat	1	44	(0)	2153582
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
184	19.7	24.8	1.3	chr2	169584078	169584154	(72609375)	+	L2c	LINE/L2	3281	3381	(6)	2155223
29	0.0	0.0	0.0	chr2	169733603	169733627	(72459902)	+	(CA)n	Simple_repeat	1	25	(0)	2155495
292	31.2	9.2	1.5	chr2	170020877	170021006	(72172523)	C	L3	LINE/CR1	(1)	4098	3958	2156019
2165	11.8	4.9	0.6	chr2	170021280	170021628	(72171901)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2156020
1078	27.9	4.3	3.2	chr2	170641169	170641631	(71551898)	+	L1ME4a	LINE/L1	5359	5826	(298)	2156955
17	8.8	0.0	0.0	chr2	170641859	170641882	(71551647)	+	(G)n	Simple_repeat	1	24	(0)	2156956
15	14.9	2.6	2.5	chr2	170714767	170714805	(71478724)	+	(GTGCGG)n	Simple_repeat	1	40	(0)	2157102
23	3.7	0.0	0.0	chr2	170714945	170714972	(71478557)	+	(GT)n	Simple_repeat	1	28	(0)	2157103
843	10.3	1.6	2.4	chr2	170984841	170984966	(71208563)	C	AluJo	SINE/Alu	(187)	125	1	2157588
21	19.6	2.5	6.2	chr2	171160204	171160282	(71033247)	+	G-rich	Low_complexity	1	81	(0)	2157910
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
1915	17.3	0.0	0.3	chr2	171535640	171535939	(70657590)	C	AluJb	SINE/Alu	(13)	299	1	2158601
332	30.4	8.5	3.3	chr2	171535957	171536133	(70657396)	C	L1ME3A	LINE/L1	(7)	6166	5977	2158602
2051	13.5	1.0	1.6	chr2	171536134	171536306	(70657223)	C	AluSz	SINE/Alu	(11)	301	134	2158603
2263	10.0	0.0	1.3	chr2	171536307	171536605	(70656924)	C	AluSz	SINE/Alu	(17)	295	1	2158604
314	28.2	7.2	10.7	chr2	171699327	171699591	(70493938)	C	L1ME5	LINE/L1	(2389)	3757	3490	2158896
50	0.0	0.0	0.0	chr2	171699592	171699634	(70493895)	+	(GT)n	Simple_repeat	1	43	(0)	2158908
314	28.2	7.2	10.7	chr2	171699635	171699653	(70493876)	C	L1ME5	LINE/L1	(2657)	3489	3484	2158896
1616	15.7	1.2	1.6	chr2	171699654	171699908	(70493621)	C	AluJr4	SINE/Alu	(26)	286	33	2158909
314	28.2	7.2	10.7	chr2	171699909	171699967	(70493562)	C	L1ME5	LINE/L1	(2663)	3483	3426	2158896
613	21.2	11.1	4.7	chr2	172098202	172098394	(70095135)	C	MIRb	SINE/MIR	(3)	265	59	2159589
343	27.8	8.6	10.4	chr2	173076036	173076236	(69117293)	C	L1M4b	LINE/L1	(6211)	656	460	2161104
24	9.9	2.3	0.0	chr2	173355651	173355693	(68837836)	+	(CCCCCAC)n	Simple_repeat	1	44	(0)	2161546
486	25.4	13.4	2.5	chr2	173355954	173356151	(68837378)	+	MIRb	SINE/MIR	35	257	(11)	2161547
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
30	27.0	2.1	1.0	chr2	173964409	173964502	(68229027)	+	(GCC)n	Simple_repeat	1	96	(0)	2162457
15	28.4	0.0	0.0	chr2	173964569	173964615	(68228914)	+	G-rich	Low_complexity	1	47	(0)	2162458
18	0.0	0.0	0.0	chr2	173964685	173964706	(68228823)	+	(CGG)n	Simple_repeat	1	22	(0)	2162459
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
27	27.8	4.9	3.5	chr2	173964826	173964867	(68228662)	+	(CTCCCCT)n	Simple_repeat	4	170	(0)	2162461
12	17.1	2.9	2.8	chr2	173964835	173964869	(68228660)	+	(CGCT)n	Simple_repeat	1	36	(0)	2162462
13	7.8	3.5	3.3	chr2	173965000	173965028	(68228501)	+	(GGAGG)n	Simple_repeat	1	30	(0)	2162463
23	17.3	0.0	5.2	chr2	173965080	173965137	(68228392)	+	(CGG)n	Simple_repeat	1	58	(0)	2162464
3056	13.6	2.6	1.0	chr2	174487832	174488351	(67705178)	+	LTR26C	LTR/ERV1	1	529	(10)	2163351
504	26.8	13.8	0.4	chr2	174788286	174788555	(67404974)	C	LTR107_Mam	LTR	(0)	570	259	2163831
4214	13.9	8.9	1.7	chr2	174788567	174789326	(67404203)	+	LTR1A2	LTR/ERV1	18	837	(0)	2163832
49	2.0	2.0	0.0	chr2	174990214	174990263	(67203266)	+	(GT)n	Simple_repeat	1	51	(0)	2164130
25	35.6	1.0	0.0	chr2	174990264	174990366	(67203163)	+	GA-rich	Low_complexity	1	104	(0)	2164131
320	30.0	5.6	5.6	chr2	175309862	175310041	(66883488)	+	AmnSINE1	SINE/5S-Deu-L2	16	195	(380)	2164623
17	0.0	0.0	0.0	chr2	177332417	177332435	(64861094)	+	(A)n	Simple_repeat	1	19	(0)	2167488
524	26.3	4.9	0.6	chr2	177727835	177727991	(64465538)	C	MIRc	SINE/MIR	(13)	255	92	2168011
478	35.3	4.1	3.4	chr2	182764057	182764592	(59428937)	C	HERVK22-int	LTR/ERVK	(315)	6522	5983	2174446
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
41	0.0	0.0	0.0	chr2	189583789	189583823	(52609706)	+	(AC)n	Simple_repeat	1	35	(0)	2183046
950	21.7	2.6	0.0	chr2	189583902	189584122	(52609407)	+	L1MB5	LINE/L1	5941	6167	(7)	2183047
1342	15.1	12.2	0.0	chr2	190879464	190879714	(51313815)	+	AluJb	SINE/Alu	1	286	(26)	2185067
17	18.4	0.0	0.0	chr2	199456968	199456998	(42736531)	+	G-rich	Low_complexity	1	31	(0)	2196843
13	7.6	0.0	8.8	chr2	199457449	199457482	(42736047)	+	(CTTCCC)n	Simple_repeat	1	34	(0)	2196844
14	24.0	6.1	1.4	chr2	199458317	199458382	(42735147)	+	GA-rich	Low_complexity	1	70	(0)	2196848
12	11.6	3.3	3.2	chr2	199458751	199458780	(42734749)	+	(CCCA)n	Simple_repeat	1	31	(0)	2196849
13	24.2	1.9	3.8	chr2	199458829	199458880	(42734649)	+	(CCGCG)n	Simple_repeat	1	53	(0)	2196850
37	8.5	0.0	0.0	chr2	200360968	200361017	(41832512)	+	(TG)n	Simple_repeat	1	50	(0)	2198213
14	20.1	0.0	0.0	chr2	200361057	200361090	(41832439)	+	(CCACC)n	Simple_repeat	1	34	(0)	2198214
24	20.7	0.0	3.4	chr2	200361078	200361136	(41832393)	+	(CA)n	Simple_repeat	1	59	(0)	2198215
15	14.4	6.2	0.0	chr2	200361274	200361305	(41832224)	+	GA-rich	Low_complexity	1	34	(0)	2198216
369	31.9	5.8	6.2	chr2	200361353	200361576	(41831953)	C	L3b	LINE/CR1	(24)	5208	4986	2198217
14	18.0	8.0	0.0	chr2	200526339	200526388	(41667141)	+	(TCCGGCC)n	Simple_repeat	1	54	(0)	2198471
257	29.8	8.1	0.9	chr2	200526502	200526616	(41666913)	+	L2a	LINE/L2	3300	3423	(3)	2198472
19	4.0	0.0	0.0	chr2	202634995	202635020	(39558509)	+	(GCG)n	Simple_repeat	1	26	(0)	2202411
20	24.8	1.4	4.0	chr2	202635311	202635383	(39558146)	+	(CAG)n	Simple_repeat	1	74	(0)	2202412
28	29.3	0.0	0.0	chr2	202635357	202635439	(39558090)	+	(GCG)n	Simple_repeat	1	83	(0)	2202413
17	17.1	5.4	3.4	chr2	202635571	202635626	(39557903)	+	(CGC)n	Simple_repeat	1	59	(0)	2202414
19	17.1	0.0	0.0	chr2	203534492	203534524	(38659005)	+	(C)n	Simple_repeat	1	33	(0)	2204166
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
186	25.0	20.8	1.2	chr2	207531079	207531159	(34662370)	+	MamRTE1	LINE/RTE-BovB	2696	2796	(1016)	2210183
11	21.0	2.5	2.4	chr2	207792071	207792110	(34401419)	+	(CATTTCT)n	Simple_repeat	1	41	(0)	2210701
245	27.9	8.5	0.0	chr2	207792153	207792238	(34401291)	C	MIRc	SINE/MIR	(141)	127	34	2210702
22	19.0	0.0	0.0	chr2	207792271	207792312	(34401217)	+	(C)n	Simple_repeat	1	42	(0)	2210703
262	34.0	7.7	1.4	chr2	207792551	207792696	(34400833)	C	MIR3	SINE/MIR	(38)	170	15	2210704
488	32.6	12.3	4.4	chr2	208489581	208490243	(33703286)	+	L2a	LINE/L2	2693	3425	(1)	2211937
23	20.3	5.3	1.3	chr2	215436150	215436224	(26757305)	+	(CCCG)n	Simple_repeat	1	79	(0)	2221075
13	13.6	2.9	2.9	chr2	215436365	215436398	(26757131)	+	G-rich	Low_complexity	1	35	(0)	2221076
801	19.3	0.7	0.0	chr2	216775375	216775509	(25418020)	C	FRAM	SINE/Alu	(39)	137	2	2223404
571	28.5	3.3	6.3	chr2	216775606	216775828	(25417701)	C	MIR	SINE/MIR	(14)	254	28	2223405
16	26.0	3.5	4.5	chr2	216880376	216880461	(25313068)	+	(CAGAAGG)n	Simple_repeat	1	89	(0)	2223589
579	30.9	3.7	9.8	chr2	218185725	218186195	(24007334)	+	L2a	LINE/L2	2976	3417	(9)	2225590
279	37.1	2.4	1.6	chr2	218396809	218396934	(23796595)	C	L2a	LINE/L2	(23)	3403	3277	2226033
373	24.6	13.1	0.8	chr2	218398217	218398343	(23795186)	+	MIRb	SINE/MIR	54	198	(70)	2226035
17	26.1	1.6	1.6	chr2	218398557	218398617	(23794912)	+	(CCCCT)n	Simple_repeat	1	62	(0)	2226036
14	23.7	6.8	0.0	chr2	218398637	218398695	(23794834)	+	(GCGCC)n	Simple_repeat	1	63	(0)	2226037
16	16.1	0.0	0.0	chr2	218400532	218400559	(23792970)	+	(C)n	Simple_repeat	1	28	(0)	2226040
13	18.8	6.0	1.9	chr2	218401055	218401104	(23792425)	+	(TGGCCAC)n	Simple_repeat	1	53	(0)	2226041
18	12.1	2.8	0.0	chr2	218568343	218568378	(23625151)	+	(CACG)n	Simple_repeat	1	37	(0)	2226392
15	7.5	0.0	6.2	chr2	218568413	218568444	(23625085)	+	(CCGCC)n	Simple_repeat	1	32	(0)	2226393
18	26.3	2.4	3.6	chr2	219178294	219178375	(23015154)	+	(CGGCGG)n	Simple_repeat	1	84	(0)	2227459
387	37.6	4.1	3.5	chr2	219278767	219279080	(22914449)	C	L2c	LINE/L2	(0)	3387	3072	2227637
43	4.5	0.0	0.0	chr2	219359212	219359257	(22834272)	+	(AC)n	Simple_repeat	1	46	(0)	2227777
1923	13.7	2.1	0.4	chr2	219359409	219359685	(22833844)	+	AluJb	SINE/Alu	1	282	(30)	2227778
14	20.5	3.7	3.6	chr2	219521120	219521173	(22672356)	+	(AGTGG)n	Simple_repeat	1	56	(0)	2228067
240	33.6	1.5	1.5	chr2	219522198	219522330	(22671199)	+	CR1-L3A_Croc	LINE/CR1	3809	3941	(347)	2228068
20	24.0	2.4	4.6	chr2	219571262	219571346	(22622183)	+	G-rich	Low_complexity	1	87	(0)	2228142
2197	11.9	1.0	0.3	chr2	222690280	222690582	(19502947)	+	AluSx1	SINE/Alu	4	308	(4)	2232998
276	29.9	2.2	0.0	chr2	222691087	222691173	(19502356)	C	MER117	DNA/hAT-Charlie	(108)	89	1	2232999
4103	14.5	3.5	1.5	chr2	222738694	222739366	(19454163)	C	LTR8	LTR/ERV1	(4)	687	1	2233085
570	22.7	12.2	5.3	chr2	222866440	222866589	(19326940)	C	MIR	SINE/MIR	(92)	170	16	2233370
24	12.1	2.2	0.0	chr2	222866739	222866744	(19326785)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2233372
30	5.5	0.0	0.0	chr2	222866745	222866782	(19326747)	+	(C)n	Simple_repeat	1	38	(0)	2233373
2500	11.6	0.0	0.0	chr2	222866823	222867132	(19326397)	C	AluSg	SINE/Alu	(0)	310	1	2233374
333	32.7	2.8	4.2	chr2	223837000	223837216	(18356313)	+	L2a	LINE/L2	3213	3426	(0)	2234957
12	20.9	0.0	7.8	chr2	223837325	223837375	(18356154)	+	(GGCCC)n	Simple_repeat	1	51	(0)	2234958
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
253	27.3	1.1	3.3	chr2	224031470	224031560	(18161969)	+	MLT1K	LTR/ERVL-MaLR	145	233	(362)	2235300
291	30.1	0.0	0.0	chr2	224031555	224031637	(18161892)	+	MLT1K	LTR/ERVL-MaLR	151	233	(362)	2235300
409	31.7	8.4	9.4	chr2	224031632	224032066	(18161463)	+	MLT1K	LTR/ERVL-MaLR	151	580	(15)	2235301
219	31.0	6.5	1.0	chr2	224584272	224584372	(17609157)	+	AmnSINE1	SINE/5S-Deu-L2	445	551	(24)	2236168
739	29.8	4.8	6.5	chr2	227480035	227480375	(14713154)	+	L3	LINE/CR1	3595	3929	(170)	2240588
1055	17.5	0.0	0.0	chr2	227480391	227480550	(14712979)	C	AluSx	SINE/Alu	(3)	309	150	2240589
1218	27.3	13.0	1.8	chr2	227480555	227481099	(14712430)	C	HAL1	LINE/L1	(539)	1968	1354	2240590
12	0.0	5.3	0.0	chr2	229921957	229921975	(12271554)	+	(GCG)n	Simple_repeat	1	20	(0)	2244313
737	12.4	0.0	0.0	chr2	230752141	230752245	(11441284)	+	U6	snRNA	1	105	(2)	2245645
1094	19.6	16.0	5.4	chr2	230752319	230752668	(11440861)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	2245646
2066	10.5	3.4	0.3	chr2	231200401	231200685	(10992844)	+	AluSq2	SINE/Alu	2	295	(18)	2246410
1297	11.7	0.0	0.0	chr2	231200686	231200856	(10992673)	+	AluSx	SINE/Alu	134	304	(8)	2246411
963	30.0	17.1	3.8	chr2	231201159	231201989	(10991540)	+	L2a	LINE/L2	517	1492	(1927)	2246412
333	26.7	12.8	5.1	chr2	231612938	231613095	(10580434)	C	MIR	SINE/MIR	(55)	213	42	2247264
2517	7.0	0.0	0.0	chr2	231670599	231670898	(10522631)	C	AluSq	SINE/Alu	(13)	300	1	2247409
14	22.1	0.0	0.0	chr2	231671113	231671149	(10522380)	+	G-rich	Low_complexity	1	37	(0)	2247410
2467	16.8	13.4	1.1	chr2	232689065	232689540	(9503989)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	5	2249137
493	25.0	0.6	7.5	chr2	232689546	232689718	(9503811)	C	MLT1N2	LTR/ERVL-MaLR	(6)	556	396	2249138
13	12.3	3.8	9.1	chr2	238158794	238158846	(4034683)	+	(CCCTGC)n	Simple_repeat	1	55	(0)	2257429
23	21.8	0.0	5.3	chr2	238158847	238158865	(4034664)	+	(CTCCCC)n	Simple_repeat	5	76	(0)	2257430
15	14.9	0.0	7.0	chr2	238158885	238158927	(4034602)	+	G-rich	Low_complexity	1	43	(0)	2257431
18	19.3	2.4	9.2	chr2	238158997	238159081	(4034448)	+	(CCG)n	Simple_repeat	1	87	(0)	2257432
29	29.1	1.3	5.2	chr2	241218397	241218547	(974982)	+	(GGCGG)n	Simple_repeat	1	153	(0)	2260835
521	10.3	0.0	0.0	chr2	241735716	241735783	(457746)	C	AluSc	SINE/Alu	(1)	308	241	2261642
2200	7.6	0.0	0.0	chr2	241735785	241736060	(457469)	C	AluSc	SINE/Alu	(33)	276	1	2261643
55	0.0	0.0	0.0	chr2	241881595	241881641	(311888)	+	(GT)n	Simple_repeat	1	47	(0)	2261811
210	32.3	13.8	1.5	chr20	266606	266941	(64177226)	C	L2a	LINE/L2	(133)	3293	2910	2262508
253	30.9	8.7	2.6	chr20	267225	267417	(64176750)	+	HERVL74-int	LTR/ERVL	3071	3276	(2409)	2262509
14	14.0	4.9	2.3	chr20	325566	325606	(64118561)	+	(GCGGCGGA)n	Simple_repeat	1	43	(0)	2262665
14	21.9	2.3	2.2	chr20	325829	325872	(64118295)	+	(GCC)n	Simple_repeat	1	45	(0)	2262666
23	8.9	0.0	0.0	chr20	372123	372158	(64072009)	+	(AAGG)n	Simple_repeat	1	36	(0)	2262785
12	23.6	0.0	4.5	chr20	382016	382059	(64062108)	+	G-rich	Low_complexity	1	44	(0)	2262815
33	0.0	0.0	0.0	chr20	382100	382127	(64062040)	+	(TG)n	Simple_repeat	1	28	(0)	2262816
76	16.9	4.0	1.1	chr20	407889	408064	(64036103)	+	(CCGGCC)n	Simple_repeat	1	183	(0)	2262881
1659	14.8	3.7	0.4	chr20	2524049	2524311	(61919856)	+	AluJb	SINE/Alu	12	283	(29)	2267110
564	9.3	22.4	0.0	chr20	2524794	2524890	(61919277)	C	FLAM_C	SINE/Alu	(15)	128	4	2267111
602	29.2	8.2	3.0	chr20	3787034	3787404	(60656763)	C	L1ME4a	LINE/L1	(0)	6124	5733	2269489
596	27.0	7.7	1.4	chr20	3980712	3980929	(60463238)	+	MER102b	DNA/hAT-Charlie	1	233	(108)	2269886
44	0.0	0.0	0.0	chr20	4014740	4014777	(60429390)	+	(CA)n	Simple_repeat	1	38	(0)	2269958
13	15.2	0.0	3.2	chr20	5611040	5611070	(58833097)	+	G-rich	Low_complexity	1	31	(0)	2272846
2481	5.4	1.4	0.3	chr20	5611301	5611594	(58832573)	+	AluSx	SINE/Alu	1	297	(15)	2272847
27	24.7	4.1	7.9	chr20	6213230	6213302	(58230865)	+	G-rich	Low_complexity	1	77	(0)	2274058
29	5.8	0.0	0.0	chr20	6213303	6213338	(58230829)	+	(GGT)n	Simple_repeat	1	36	(0)	2274059
27	23.4	4.1	6.4	chr20	6213339	6213488	(58230679)	+	G-rich	Low_complexity	1	146	(0)	2274060
14	4.9	0.0	0.0	chr20	17681710	17681730	(46762437)	+	(GGGA)n	Simple_repeat	1	21	(0)	2291260
25	21.0	0.0	4.2	chr20	17682473	17682543	(46761624)	+	G-rich	Low_complexity	1	71	(0)	2291262
442	22.1	6.6	0.0	chr20	23051695	23051807	(41392360)	C	MER45A	DNA/hAT-Tip100	(0)	178	58	2299172
13	3.7	0.0	11.4	chr20	23421480	23421514	(41022653)	+	(CGCAGG)n	Simple_repeat	1	35	(0)	2299690
16	12.3	9.1	0.0	chr20	25293123	25293166	(39151001)	+	G-rich	Low_complexity	1	48	(0)	2301941
494	29.5	2.9	0.0	chr20	25293280	25293445	(39150722)	C	L1MD3	LINE/L1	(180)	7815	7645	2301942
13	23.0	5.6	4.0	chr20	25390236	25390306	(39053861)	+	(GCAGG)n	Simple_repeat	1	75	(0)	2302096
18	25.3	1.3	5.1	chr20	25390705	25390781	(39053386)	+	(CCG)n	Simple_repeat	1	78	(0)	2302097
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
790	20.8	1.7	3.3	chr20	25695827	25696010	(38748157)	+	MER4E1	LTR/ERV1	720	900	(3)	2302614
16	20.9	0.0	0.0	chr20	30377144	30377176	(34066991)	+	(C)n	Simple_repeat	1	33	(0)	2304972
675	27.6	12.7	2.8	chr20	31595638	31596028	(32848139)	C	L2a	LINE/L2	(31)	3395	2961	2306363
251	31.6	8.2	1.4	chr20	31603962	31604070	(32840097)	C	MIR3	SINE/MIR	(111)	157	42	2306389
197	21.6	0.0	0.0	chr20	31606766	31606802	(32837365)	C	MER5A	DNA/hAT-Charlie	(24)	165	129	2306392
195	30.2	5.5	2.3	chr20	31606870	31606957	(32837210)	C	MIR3	SINE/MIR	(50)	158	68	2306393
910	12.1	0.0	2.9	chr20	31633782	31633921	(32810246)	+	FLAM_C	SINE/Alu	2	137	(6)	2306474
2135	10.5	0.0	0.7	chr20	31634039	31634344	(32809823)	C	AluSx1	SINE/Alu	(8)	304	1	2306475
14	11.6	3.6	0.0	chr20	31675922	31675949	(32768218)	+	(CCT)n	Simple_repeat	1	29	(0)	2306601
1002	25.5	0.9	0.9	chr20	31676226	31676447	(32767720)	C	MIR	SINE/MIR	(24)	238	17	2306602
213	18.0	0.0	12.9	chr20	31704432	31704501	(32739666)	+	MIR3	SINE/MIR	145	205	(3)	2306675
261	31.2	7.5	3.6	chr20	31704886	31705051	(32739116)	C	L2c	LINE/L2	(2)	3385	3213	2306676
16	21.1	0.0	0.0	chr20	31723838	31723875	(32720292)	+	(GCCT)n	Simple_repeat	1	38	(0)	2306714
396	24.4	10.4	3.4	chr20	31737872	31738049	(32706118)	C	L1M5	LINE/L1	(1372)	4774	4583	2306765
2301	8.9	0.0	1.6	chr20	31738052	31738354	(32705813)	C	AluSz	SINE/Alu	(14)	298	1	2306766
12	8.8	4.2	0.0	chr20	31738402	31738425	(32705742)	+	(GTT)n	Simple_repeat	1	25	(0)	2306767
566	22.2	0.0	0.0	chr20	31738467	31738574	(32705593)	C	FLAM_A	SINE/Alu	(34)	108	1	2306768
15	11.7	0.0	0.0	chr20	31968008	31968035	(32476132)	+	(GGCGG)n	Simple_repeat	1	28	(0)	2307303
22	11.5	2.6	0.0	chr20	31968059	31968097	(32476070)	+	(GGA)n	Simple_repeat	1	40	(0)	2307304
2220	11.9	0.0	0.0	chr20	32537777	32538078	(31906089)	C	AluSz	SINE/Alu	(10)	302	1	2308613
187	33.3	1.4	1.4	chr20	32538119	32538191	(31905976)	C	MIR3	SINE/MIR	(19)	189	117	2308614
58	1.8	0.0	0.0	chr20	32538446	32538502	(31905665)	+	(CCTC)n	Simple_repeat	1	57	(0)	2308615
17	24.1	1.3	6.4	chr20	32584067	32584082	(31860085)	+	(CCCCGC)n	Simple_repeat	1	26	(39)	2308734
15	19.9	0.0	0.0	chr20	32584083	32584111	(31860056)	+	(C)n	Simple_repeat	1	29	(0)	2308735
17	24.1	1.3	6.4	chr20	32584112	32584133	(31860034)	+	(CCCCGC)n	Simple_repeat	27	65	(0)	2308734
43	0.0	0.0	0.0	chr20	32584134	32584170	(31859997)	+	(CA)n	Simple_repeat	1	37	(0)	2308736
13	16.3	2.8	2.7	chr20	32584311	32584346	(31859821)	+	(GCCCG)n	Simple_repeat	1	37	(0)	2308737
13	23.5	3.0	5.8	chr20	32584487	32584563	(31859604)	+	(CCCG)n	Simple_repeat	1	74	(0)	2308738
460	24.0	9.3	2.4	chr20	32743631	32743826	(31700341)	+	MIRb	SINE/MIR	46	267	(1)	2309172
17	7.8	0.0	0.0	chr20	32761822	32761848	(31682319)	+	(TCCCC)n	Simple_repeat	1	27	(0)	2309234
12	15.9	5.7	0.0	chr20	32762320	32762354	(31681813)	+	G-rich	Low_complexity	1	37	(0)	2309235
12	24.6	0.0	2.5	chr20	32762485	32762524	(31681643)	+	G-rich	Low_complexity	1	40	(0)	2309236
266	22.9	10.3	1.0	chr20	32764185	32764281	(31679886)	+	MIR	SINE/MIR	96	202	(60)	2309238
208	36.3	3.4	0.9	chr20	32764279	32764392	(31679775)	+	MIRb	SINE/MIR	106	222	(46)	2309239
346	20.0	0.0	0.0	chr20	33299030	33299094	(31145073)	C	U6	snRNA	(42)	65	1	2310369
208	19.0	6.5	0.0	chr20	33299099	33299156	(31145011)	C	MIR3	SINE/MIR	(61)	147	86	2310370
516	29.0	13.8	0.0	chr20	33299541	33299733	(31144434)	+	MIR	SINE/MIR	28	251	(11)	2310371
345	33.8	9.2	1.3	chr20	33400836	33400994	(31043173)	+	MIRb	SINE/MIR	54	226	(42)	2310616
514	31.8	2.0	2.4	chr20	33401075	33401325	(31042842)	C	MIR	SINE/MIR	(10)	252	3	2310617
1161	9.2	0.0	0.0	chr20	33840105	33840257	(30603910)	+	AluSx1	SINE/Alu	142	294	(18)	2311734
268	32.2	10.6	0.0	chr20	33840420	33840562	(30603605)	C	MIRb	SINE/MIR	(101)	167	8	2311735
357	26.7	1.1	0.0	chr20	34571030	34571115	(29873052)	C	MIRb	SINE/MIR	(79)	189	103	2313355
20	3.4	0.0	3.1	chr20	34704187	34704218	(29739949)	+	(GGGAG)n	Simple_repeat	1	32	(0)	2313674
226	23.9	1.5	1.5	chr20	34960723	34960790	(29483377)	+	L2b	LINE/L2	3303	3370	(5)	2314233
500	28.8	3.7	0.6	chr20	34960804	34960960	(29483207)	C	MIRb	SINE/MIR	(13)	255	94	2314234
214	34.7	0.0	11.2	chr20	34961053	34961159	(29483008)	C	MIR3	SINE/MIR	(21)	187	93	2314235
2102	4.5	10.3	2.8	chr20	35412360	35412647	(29031520)	+	AluSz6	SINE/Alu	1	312	(0)	2315198
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
27	16.1	0.0	0.0	chr20	35741988	35742037	(28702130)	+	(TGC)n	Simple_repeat	1	50	(0)	2315914
16	14.4	2.5	2.4	chr20	35742239	35742278	(28701889)	+	(ACACAC)n	Simple_repeat	1	41	(0)	2315915
22	20.9	4.0	2.6	chr20	35772088	35772164	(28672003)	+	(GGCCG)n	Simple_repeat	1	78	(0)	2316009
12	21.9	2.2	4.3	chr20	35772191	35772236	(28671931)	+	(CCCGG)n	Simple_repeat	1	47	(0)	2316010
14	21.0	3.9	1.9	chr20	35772336	35772386	(28671781)	+	G-rich	Low_complexity	1	53	(0)	2316011
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
996	25.4	13.8	2.6	chr20	36051234	36051650	(28392517)	C	L2a	LINE/L2	(0)	3426	2956	2316727
337	30.6	0.8	4.6	chr20	36460801	36460930	(27983237)	C	MIRb	SINE/MIR	(102)	166	42	2317682
17	26.8	1.4	4.1	chr20	36461263	36461334	(27982833)	+	(GGCC)n	Simple_repeat	1	73	(0)	2317683
15	7.8	0.0	3.5	chr20	36461410	36461438	(27982729)	+	(GGGGC)n	Simple_repeat	1	29	(0)	2317684
27	28.0	1.0	2.9	chr20	36461591	36461691	(27982476)	+	(GCCCG)n	Simple_repeat	1	102	(0)	2317685
2370	10.2	0.0	0.0	chr20	36464568	36464870	(27979297)	+	AluSq2	SINE/Alu	1	303	(10)	2317692
446	30.1	8.5	4.1	chr20	36464878	36465096	(27979071)	+	MIRb	SINE/MIR	21	262	(6)	2317693
280	26.2	6.2	6.2	chr20	36465309	36465487	(27978680)	C	MIRc	SINE/MIR	(71)	197	19	2317694
197	19.4	0.0	0.0	chr20	36572260	36572295	(27871872)	+	MIR1_Amn	SINE/MIR	117	152	(78)	2317920
21	3.3	0.0	3.0	chr20	36574476	36574508	(27869659)	+	(CCCCT)n	Simple_repeat	1	33	(0)	2317922
15	13.9	0.0	0.0	chr20	36744968	36744991	(27699176)	+	(G)n	Simple_repeat	1	24	(0)	2318336
251	27.4	0.0	0.0	chr20	36745199	36745260	(27698907)	+	MIRb	SINE/MIR	207	268	(0)	2318337
538	24.1	6.6	0.6	chr20	36745415	36745585	(27698582)	+	MIRc	SINE/MIR	27	208	(60)	2318338
202	32.0	16.2	3.2	chr20	36772732	36772886	(27671281)	+	L2b	LINE/L2	3083	3261	(114)	2318410
679	26.2	3.3	5.9	chr20	36773162	36773389	(27670778)	C	MIRb	SINE/MIR	(8)	260	35	2318411
269	24.2	6.2	10.8	chr20	36774507	36774561	(27669606)	+	L2c	LINE/L2	3050	3107	(280)	2318412
2334	5.6	1.4	3.3	chr20	36774562	36774863	(27669304)	C	AluSx1	SINE/Alu	(16)	296	1	2318413
260	27.9	0.0	0.0	chr20	37378909	37378969	(27065198)	+	L2b	LINE/L2	3312	3372	(3)	2319892
359	34.1	1.5	0.0	chr20	37387166	37387300	(27056867)	+	L2b	LINE/L2	3003	3139	(236)	2319914
602	27.1	2.4	10.2	chr20	37387323	37387548	(27056619)	C	MIRb	SINE/MIR	(35)	233	26	2319915
293	33.6	2.1	6.7	chr20	37387632	37387781	(27056386)	+	L2b	LINE/L2	3245	3387	(0)	2319914
890	25.9	4.5	1.7	chr20	37387789	37388028	(27056139)	C	MIRb	SINE/MIR	(0)	268	22	2319916
17	12.7	0.0	0.0	chr20	37526272	37526297	(26917870)	+	(C)n	Simple_repeat	1	26	(0)	2320189
27	0.0	3.5	0.0	chr20	37901883	37901911	(26542256)	+	(GGGGCGG)n	Simple_repeat	1	30	(0)	2321013
193	37.3	4.5	2.6	chr20	37901977	37902130	(26542037)	+	MIRc	SINE/MIR	20	176	(92)	2321014
13	15.4	0.0	3.2	chr20	37944166	37944196	(26499971)	+	(CCCG)n	Simple_repeat	1	31	(0)	2321128
16	0.0	0.0	0.0	chr20	37993113	37993129	(26451038)	+	(T)n	Simple_repeat	1	17	(0)	2321224
191	13.1	5.0	1.7	chr20	38356059	38356455	(26087712)	+	(AC)n	Simple_repeat	1	417	(0)	2322001
416	29.2	22.3	1.3	chr20	38858938	38859169	(25584998)	C	MLT1H1	LTR/ERVL-MaLR	(272)	283	3	2323023
271	11.1	8.2	16.7	chr20	38859261	38859368	(25584799)	+	L1MB7	LINE/L1	5997	6094	(90)	2323024
967	9.9	1.5	8.2	chr20	38859451	38859497	(25584670)	C	MER33	DNA/hAT-Charlie	(0)	324	278	2323025
1948	16.4	0.3	0.0	chr20	38859498	38859789	(25584378)	C	AluJr	SINE/Alu	(18)	294	2	2323026
365	26.6	3.4	0.0	chr20	43590252	43590366	(20853801)	+	L2b	LINE/L2	3036	3168	(258)	2331495
18	12.1	6.4	2.0	chr20	45348465	45348511	(19095656)	+	(CCGGCC)n	Simple_repeat	1	50	(0)	2335450
307	23.0	2.1	1.2	chr20	45373514	45373615	(19070552)	+	MIRc	SINE/MIR	22	134	(134)	2335520
267	14.6	0.0	0.0	chr20	45858089	45858129	(18586038)	C	L2b	LINE/L2	(3)	3372	3332	2336394
19	9.8	0.0	0.0	chr20	45858359	45858379	(18585788)	+	(TTCA)n	Simple_repeat	1	21	(0)	2336395
1554	17.4	3.9	0.0	chr20	45858380	45858672	(18585495)	C	AluJr	SINE/Alu	(7)	305	1	2336396
13	21.1	2.6	0.0	chr20	45978620	45978657	(18465510)	+	(ATTGTA)n	Simple_repeat	1	39	(0)	2336678
1602	12.4	8.5	4.6	chr20	45987725	45988007	(18456160)	+	AluJr	SINE/Alu	1	295	(17)	2336710
806	7.7	0.0	1.0	chr20	45988030	45988133	(18456034)	+	AluSz	SINE/Alu	1	103	(209)	2336711
2106	13.7	0.0	0.3	chr20	45988164	45988463	(18455704)	C	AluSz6	SINE/Alu	(13)	299	1	2336712
51	0.0	0.0	0.0	chr20	46411196	46411239	(18032928)	+	(GT)n	Simple_repeat	1	44	(0)	2337619
2208	11.6	0.0	0.3	chr20	46411320	46411620	(18032547)	C	AluJb	SINE/Alu	(11)	301	2	2337620
790	23.3	13.4	1.6	chr20	46706243	46706389	(17737778)	C	LTR83	LTR/ERVL	(2)	778	626	2338272
4733	14.7	6.2	0.5	chr20	46706390	46707162	(17737005)	C	LTR8B	LTR/ERV1	(0)	820	1	2338273
345	23.6	16.7	1.8	chr20	46757868	46757979	(17686188)	C	MIRb	SINE/MIR	(117)	151	20	2338389
309	28.2	7.3	7.3	chr20	46758314	46758588	(17685579)	C	L1ME4a	LINE/L1	(3)	6121	5847	2338390
20	17.9	1.9	3.6	chr20	47355015	47355076	(17089091)	+	(CAC)n	Simple_repeat	1	60	(0)	2339805
242	34.3	2.8	5.7	chr20	48621231	48621412	(15822755)	C	MIRb	SINE/MIR	(77)	191	10	2342466
230	23.6	12.1	0.0	chr20	48621712	48621782	(15822385)	C	MIRc	SINE/MIR	(31)	177	100	2342467
482	30.8	11.8	0.1	chr20	48828909	48829144	(15615023)	+	MIR	SINE/MIR	8	268	(0)	2342959
301	22.8	6.3	13.2	chr20	48902636	48902908	(15541259)	C	Charlie18a	DNA/hAT-Charlie	(0)	342	90	2343161
32	2.7	0.0	0.0	chr20	48903009	48903046	(15541121)	+	(GA)n	Simple_repeat	1	38	(0)	2343162
43	0.0	0.0	0.0	chr20	48903047	48903083	(15541084)	+	(GT)n	Simple_repeat	1	37	(0)	2343163
2347	10.6	0.0	0.0	chr20	48903259	48903560	(15540607)	+	AluSx	SINE/Alu	1	302	(10)	2343164
14	29.6	4.8	2.3	chr20	49188169	49188251	(15255916)	+	GA-rich	Low_complexity	1	87	(0)	2343771
22	23.3	1.7	0.0	chr20	49188384	49188443	(15255724)	+	(GCCCCC)n	Simple_repeat	1	61	(0)	2343772
28	14.9	5.5	5.2	chr20	49188641	49188731	(15255436)	+	(CCTT)n	Simple_repeat	1	96	(0)	2343773
340	22.8	1.2	1.2	chr20	49614673	49614752	(14829415)	+	L2b	LINE/L2	3296	3375	(0)	2344886
289	33.6	6.3	0.9	chr20	49614846	49615055	(14829112)	C	L2	LINE/L2	(356)	3063	2842	2344896
20	0.0	0.0	0.0	chr20	49615062	49615083	(14829084)	+	(TG)n	Simple_repeat	1	22	(0)	2344897
28	3.3	0.0	0.0	chr20	49615110	49615140	(14829027)	+	(TTG)n	Simple_repeat	1	31	(0)	2344898
2055	13.2	0.0	0.0	chr20	49615146	49615433	(14828734)	C	AluJb	SINE/Alu	(22)	290	3	2344899
1893	16.3	0.3	0.0	chr20	49668872	49669160	(14775007)	C	AluJo	SINE/Alu	(22)	290	1	2345014
380	12.1	0.0	0.0	chr20	49765053	49765110	(14679057)	+	Alu	SINE/Alu	243	300	(1)	2345259
11	16.1	4.3	6.1	chr20	49765112	49765158	(14679009)	+	(AATGAA)n	Simple_repeat	1	49	(0)	2345260
625	28.4	19.5	7.4	chr20	49765480	49765641	(14678526)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	403	2345261
4062	9.8	0.6	0.0	chr20	49765642	49766190	(14677977)	C	MER41A	LTR/ERV1	(0)	554	3	2345262
2272	10.7	1.0	0.7	chr20	49776637	49776945	(14667222)	C	AluSg	SINE/Alu	(0)	310	1	2345297
1584	24.6	5.4	3.2	chr20	49789671	49790144	(14654023)	+	LTR16C	LTR/ERVL	1	485	(4)	2345346
800	27.8	17.2	7.0	chr20	49790145	49790183	(14653984)	+	MLT1K	LTR/ERVL-MaLR	545	577	(18)	2345344
219	11.8	0.0	0.0	chr20	49790684	49790717	(14653450)	C	L2a	LINE/L2	(0)	3426	3393	2345347
272	22.4	10.1	8.4	chr20	49978820	49978926	(14465241)	+	L1ME4b	LINE/L1	713	821	(71)	2345763
17	18.2	0.0	0.0	chr20	49982913	49982943	(14461224)	+	(C)n	Simple_repeat	1	31	(0)	2345774
202	27.9	10.3	0.0	chr20	49987424	49987484	(14456683)	+	MIR1_Amn	SINE/MIR	83	150	(80)	2345780
386	28.7	2.7	0.0	chr20	49987599	49987706	(14456461)	C	MIRb	SINE/MIR	(87)	181	71	2345781
14	22.7	1.8	5.2	chr20	50113046	50113102	(14331065)	+	(CCCCGG)n	Simple_repeat	1	58	(0)	2346105
18	15.0	4.1	3.9	chr20	50190916	50190964	(14253203)	+	(GCA)n	Simple_repeat	1	51	(0)	2346323
336	28.1	14.8	0.6	chr20	50256413	50256591	(14187576)	C	ORSL-2a	DNA/hAT-Tip100	(64)	278	70	2346482
389	33.3	1.9	0.0	chr20	50257117	50257269	(14186898)	+	MER102b	DNA/hAT-Charlie	36	191	(150)	2346483
321	37.1	5.0	1.8	chr20	50291860	50292101	(14152066)	+	MIRb	SINE/MIR	5	265	(3)	2346565
248	35.1	0.0	0.0	chr20	50292120	50292196	(14151971)	+	MIR	SINE/MIR	178	254	(8)	2346566
304	25.0	8.8	3.5	chr20	50292389	50292516	(14151651)	+	MIR3	SINE/MIR	3	143	(125)	2346567
457	23.9	5.6	5.6	chr20	50308410	50308551	(14135616)	+	MIRc	SINE/MIR	57	198	(70)	2346607
445	33.7	7.6	1.7	chr20	50511100	50511446	(13932721)	C	L2a	LINE/L2	(1)	3425	3057	2347141
665	22.3	0.0	3.9	chr20	50790363	50790516	(13653651)	+	MER5B	DNA/hAT-Charlie	26	173	(5)	2347742
2234	11.8	0.3	0.0	chr20	50881665	50881960	(13562207)	C	AluSz6	SINE/Alu	(15)	297	1	2347978
574	23.8	17.4	2.4	chr20	50881961	50882056	(13562111)	+	L1ME4b	LINE/L1	244	352	(540)	2347977
878	14.5	0.0	2.9	chr20	50882057	50882194	(13561973)	+	AluJb	SINE/Alu	161	294	(18)	2347979
774	28.4	10.6	1.1	chr20	50882214	50882597	(13561570)	+	L1ME4b	LINE/L1	358	789	(41)	2347977
326	32.2	3.7	4.2	chr20	50882616	50882886	(13561281)	+	Charlie8	DNA/hAT-Charlie	2349	2425	(3)	2347980
15	8.9	4.2	0.0	chr20	50929926	50929949	(13514218)	+	(GT)n	Simple_repeat	1	25	(0)	2348040
16	20.8	0.0	0.0	chr20	50930345	50930377	(13513790)	+	(C)n	Simple_repeat	1	33	(0)	2348041
16	19.4	2.4	0.0	chr20	51542508	51542548	(12901619)	+	G-rich	Low_complexity	1	42	(0)	2349347
14	12.8	2.6	5.1	chr20	53593709	53593746	(10850421)	+	G-rich	Low_complexity	1	39	(0)	2353815
21	11.1	3.7	5.4	chr20	53593842	53593895	(10850272)	+	GA-rich	Low_complexity	1	56	(0)	2353816
254	27.9	12.4	8.4	chr20	53606308	53606522	(10837645)	C	MIRb	SINE/MIR	(15)	253	29	2353845
225	31.9	5.3	2.7	chr20	53606717	53606864	(10837303)	+	MIR	SINE/MIR	10	161	(101)	2353846
1530	14.1	9.9	5.4	chr20	53606867	53607163	(10837004)	+	AluJo	SINE/Alu	1	312	(0)	2353847
735	22.0	7.0	0.6	chr20	53623804	53624019	(10820148)	C	MIR	SINE/MIR	(0)	262	33	2353884
30	2.8	0.0	0.0	chr20	53754055	53754090	(10690077)	+	(TC)n	Simple_repeat	1	36	(0)	2354262
43	2.5	0.0	0.0	chr20	53754091	53754131	(10690036)	+	(TG)n	Simple_repeat	1	41	(0)	2354263
13	13.2	0.0	0.0	chr20	53754169	53754193	(10689974)	+	(TAA)n	Simple_repeat	1	25	(0)	2354264
707	20.1	0.0	6.9	chr20	53754198	53754357	(10689810)	C	MIR	SINE/MIR	(24)	238	90	2354265
38	27.0	1.1	0.0	chr20	53915271	53915364	(10528803)	+	GA-rich	Low_complexity	1	95	(0)	2354661
15	8.5	0.0	0.0	chr20	53915453	53915477	(10528690)	+	(TTAT)n	Simple_repeat	1	25	(0)	2354662
237	31.7	8.9	2.7	chr20	57251185	57251372	(7192795)	C	MIR	SINE/MIR	(51)	211	11	2360840
2275	9.7	0.0	0.0	chr20	57251652	57251960	(7192207)	+	AluSz	SINE/Alu	1	309	(3)	2360841
220	26.5	14.0	7.0	chr20	57350285	57350483	(7093684)	C	MIRc	SINE/MIR	(0)	268	54	2361033
1353	10.7	0.0	0.6	chr20	57350667	57350845	(7093322)	C	AluSx	SINE/Alu	(27)	285	108	2361034
59	17.3	0.0	0.0	chr20	57350850	57350953	(7093214)	+	G-rich	Low_complexity	1	104	(0)	2361035
841	8.6	0.0	1.7	chr20	57350954	57351071	(7093096)	C	AluSx	SINE/Alu	(196)	116	1	2361034
38	0.0	0.0	0.0	chr20	57392013	57392047	(7052120)	+	(CCCCCA)n	Simple_repeat	1	35	(0)	2361096
282	23.5	7.5	1.0	chr20	57392155	57392253	(7051914)	C	MamRep1879	DNA/hAT-Tip100?	(0)	216	111	2361097
17	0.0	0.0	0.0	chr20	58402563	58402581	(6041586)	+	(T)n	Simple_repeat	1	19	(0)	2362877
1939	17.2	0.0	0.0	chr20	58402724	58403019	(6041148)	+	AluSz6	SINE/Alu	2	297	(15)	2362878
13	14.8	5.1	2.4	chr20	58652228	58652266	(5791901)	+	(AAGAT)n	Simple_repeat	1	41	(0)	2363300
300	29.6	17.9	5.3	chr20	58875295	58875483	(5568684)	C	MamTip2	DNA/hAT-Tip100	(16)	289	72	2363572
14	21.4	1.6	6.5	chr20	58875887	58875947	(5568220)	+	(AAGGAGC)n	Simple_repeat	1	62	(0)	2363573
13	15.4	0.0	3.2	chr20	58891146	58891176	(5552991)	+	(CCCGG)n	Simple_repeat	1	31	(0)	2363584
37	24.7	3.5	3.4	chr20	58891209	58891351	(5552816)	+	(GCC)n	Simple_repeat	1	148	(0)	2363585
21	32.9	2.8	0.9	chr20	58891362	58891468	(5552699)	+	(CGG)n	Simple_repeat	1	110	(0)	2363586
16	9.4	10.6	1.9	chr20	58891447	58891493	(5552674)	+	(TCGGCC)n	Simple_repeat	1	52	(0)	2363587
13	31.2	0.0	4.2	chr20	58892524	58892595	(5551572)	+	G-rich	Low_complexity	1	72	(0)	2363592
992	25.2	15.8	3.5	chr20	58962689	58963120	(5481047)	C	LTR16A2	LTR/ERVL	(0)	495	1	2363719
9027	14.0	2.2	7.9	chr20	58963159	58964143	(5480024)	+	L1MCa	LINE/L1	267	1144	(5364)	2363720
17	19.2	7.3	1.7	chr20	58981450	58981504	(5462663)	+	(CG)n	Simple_repeat	1	59	(0)	2363762
16	18.9	0.0	0.0	chr20	59933752	59933781	(4510386)	+	(C)n	Simple_repeat	1	30	(0)	2365216
4230	16.0	5.2	4.8	chr20	61513865	61514643	(2929524)	C	LTR39	LTR/ERV1	(0)	783	1	2367458
288	28.9	0.0	0.0	chr20	61525966	61526054	(2918113)	C	MIRc	SINE/MIR	(93)	169	81	2367470
1443	1.2	0.0	1.2	chr20	61526496	61526661	(2917506)	C	L1PA3	LINE/L1	(0)	6155	5992	2367471
15	13.9	0.0	0.0	chr20	62068074	62068097	(2376070)	+	(G)n	Simple_repeat	1	24	(0)	2368056
2152	12.0	0.0	1.6	chr20	62121112	62121428	(2322739)	C	AluSx1	SINE/Alu	(0)	312	1	2368175
17	24.5	1.6	3.2	chr20	62122132	62122192	(2321975)	+	(CCGC)n	Simple_repeat	1	62	(0)	2368176
28	9.6	0.0	0.0	chr20	62143440	62143484	(2300683)	+	(GGCGGCGTCA)n	Simple_repeat	1	45	(0)	2368191
23	21.0	2.3	5.7	chr20	62143897	62143982	(2300185)	+	G-rich	Low_complexity	1	88	(0)	2368192
212	27.5	13.2	2.6	chr20	62362777	62363007	(2081160)	C	L2b	LINE/L2	(168)	3207	2936	2368463
315	29.1	8.2	2.2	chr20	62363256	62363392	(2080775)	+	MIRb	SINE/MIR	46	191	(77)	2368464
15	11.9	5.9	5.6	chr20	62367121	62367171	(2076996)	+	(CCGCGC)n	Simple_repeat	1	54	(0)	2368468
15	31.7	0.0	0.0	chr20	62367410	62367464	(2076703)	+	G-rich	Low_complexity	1	55	(0)	2368469
13	19.5	0.0	2.7	chr20	62458525	62458561	(1985606)	+	G-rich	Low_complexity	1	37	(0)	2368591
1861	31.6	7.8	4.8	chr20	62874540	62875101	(1569066)	+	ERVL-E-int	LTR/ERVL	573	1157	(4510)	2369060
198	13.0	0.6	0.0	chr20	62875203	62875521	(1568646)	+	(CCCCCA)n	Simple_repeat	1	321	(0)	2369062
406	32.0	1.5	0.0	chr20	62875523	62875650	(1568517)	+	ERVL-E-int	LTR/ERVL	1299	1428	(4239)	2369060
1037	26.2	7.7	2.8	chr20	62875746	62876142	(1568025)	+	ERVL-E-int	LTR/ERVL	1609	2026	(3688)	2369060
2210	10.4	1.3	0.0	chr20	62912750	62913057	(1531110)	+	AluSx1	SINE/Alu	1	312	(0)	2369082
13	27.9	3.2	1.6	chr20	63501664	63501725	(942442)	+	G-rich	Low_complexity	1	64	(0)	2369622
250	21.3	1.6	0.0	chr20	63501778	63501838	(942329)	C	MIR	SINE/MIR	(131)	131	70	2369623
180	34.1	4.2	9.2	chr20	63773985	63774136	(670031)	C	MIRb	SINE/MIR	(42)	226	83	2370003
18	24.7	0.0	6.6	chr20	63969527	63969603	(474564)	+	G-rich	Low_complexity	1	71	(0)	2370304
16	23.0	5.6	4.0	chr20	63969865	63969935	(474232)	+	(GC)n	Simple_repeat	1	75	(0)	2370305
17	20.6	0.0	0.0	chr20	64248250	64248283	(195884)	+	(C)n	Simple_repeat	1	34	(0)	2370617
16	0.0	0.0	0.0	chr21	15733132	15733148	(30976835)	+	(C)n	Simple_repeat	1	17	(0)	2379546
483	28.8	1.1	2.4	chr21	31713308	31713473	(14996510)	+	MIR	SINE/MIR	95	257	(11)	2401918
483	32.2	5.7	4.3	chr21	31714022	31714229	(14995754)	+	MIRb	SINE/MIR	42	252	(16)	2401919
12	19.3	0.0	5.1	chr21	31731235	31731273	(14978710)	+	(CCCCCG)n	Simple_repeat	1	39	(0)	2401951
13	22.7	4.3	0.0	chr21	31731432	31731477	(14978506)	+	G-rich	Low_complexity	1	48	(0)	2401952
378	24.6	3.2	1.6	chr21	31943356	31943479	(14766504)	C	UCON107	DNA/hAT-Tag1	(19)	186	61	2402378
500	28.3	4.6	0.0	chr21	32279316	32279460	(14430523)	C	MER5A	DNA/hAT-Charlie	(10)	179	28	2402943
349	24.8	5.6	4.7	chr21	32279476	32279581	(14430402)	+	SVA_C	Retroposon/SVA	205	311	(1073)	2402944
579	22.5	4.4	1.0	chr21	32279496	32279625	(14430358)	C	FLAM_C	SINE/Alu	(80)	222	1	2402945
1178	15.6	10.2	0.0	chr21	32306800	32307010	(14402973)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	2	2402994
2403	10.3	0.0	0.0	chr21	32613220	32613521	(14096462)	+	AluSx	SINE/Alu	1	302	(10)	2403513
183	29.7	2.6	9.8	chr21	32613522	32613536	(14096447)	C	L2a	LINE/L2	(134)	3253	3239	2403512
2028	16.4	9.3	0.2	chr21	32613595	32614230	(14095753)	C	SATR1	Satellite	(45)	693	1	2403514
17	17.0	2.0	3.9	chr21	33543503	33543552	(13166431)	+	(CCTCCG)n	Simple_repeat	1	51	(0)	2405206
226	15.8	0.0	0.0	chr21	33544655	33544692	(13165291)	C	L1M5	LINE/L1	(424)	5818	5781	2405207
2243	11.0	0.3	1.6	chr21	34200868	34201176	(12508807)	+	AluSx1	SINE/Alu	1	305	(7)	2406264
13	19.4	4.9	0.0	chr21	34887236	34887276	(11822707)	+	G-rich	Low_complexity	1	43	(0)	2407306
816	19.9	0.0	4.0	chr21	35027273	35027445	(11682538)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	2407498
2187	10.6	10.3	1.2	chr21	36005108	36005443	(10704540)	+	MER48	LTR/ERV1	38	407	(0)	2408978
545	30.5	6.5	0.8	chr21	36005450	36005697	(10704286)	+	LTR81B	LTR/Gypsy	28	290	(1103)	2408979
381	15.2	0.0	0.0	chr21	36113049	36113107	(10596876)	C	AluSp	SINE/Alu	(16)	297	239	2409152
974	20.2	1.5	0.0	chr21	36113101	36113298	(10596685)	C	MER50	LTR/ERV1	(533)	201	1	2409153
2273	11.0	0.0	1.0	chr21	36113352	36113660	(10596323)	+	AluSg	SINE/Alu	1	306	(4)	2409154
1967	21.4	4.7	3.3	chr21	36113690	36114176	(10595807)	+	MER50	LTR/ERV1	241	734	(0)	2409155
16	12.3	2.7	2.6	chr21	36966675	36966711	(9743272)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	2410751
18	23.7	4.1	2.6	chr21	36966712	36966734	(9743249)	+	(CCCGC)n	Simple_repeat	26	76	(0)	2410750
16	11.7	3.6	0.0	chr21	37073463	37073490	(9636493)	+	(GT)n	Simple_repeat	1	29	(0)	2410978
28	15.5	0.0	0.0	chr21	37339465	37339509	(9370474)	+	A-rich	Low_complexity	1	45	(0)	2411416
41	13.7	3.5	8.7	chr21	37366300	37366443	(9343540)	+	(GGCGCG)n	Simple_repeat	1	149	(0)	2411467
20	15.6	1.5	7.5	chr21	37366467	37366532	(9343451)	+	(CCTCC)n	Simple_repeat	1	67	(0)	2411468
13	21.7	0.0	0.0	chr21	37366867	37366898	(9343085)	+	(GGC)n	Simple_repeat	1	32	(0)	2411469
27	23.2	0.0	0.0	chr21	37366986	37367047	(9342936)	+	(GCT)n	Simple_repeat	1	62	(0)	2411470
295	24.7	6.9	0.0	chr21	37368606	37368737	(9341246)	C	MIRc	SINE/MIR	(33)	229	77	2411477
1532	19.6	11.3	1.7	chr21	37551294	37551714	(9158269)	+	Charlie1b	DNA/hAT-Charlie	16	482	(41)	2411772
20	11.1	0.0	0.0	chr21	38713075	38713103	(7996880)	+	(G)n	Simple_repeat	1	29	(0)	2413371
2764	12.5	1.2	1.0	chr21	38905255	38905659	(7804324)	C	LTR9B	LTR/ERV1	(0)	644	239	2413679
340	22.9	12.5	1.9	chr21	38905876	38905982	(7804001)	+	MIRc	SINE/MIR	19	138	(130)	2413680
311	24.6	8.1	7.1	chr21	39004628	39004811	(7705172)	C	MIR	SINE/MIR	(80)	188	3	2413845
1310	21.1	11.7	3.5	chr21	39005215	39005637	(7704346)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	2413846
16	24.6	1.6	3.2	chr21	39312578	39312638	(7397345)	+	(GCCCC)n	Simple_repeat	1	62	(0)	2414330
11	24.1	0.0	0.0	chr21	39312774	39312807	(7397176)	+	G-rich	Low_complexity	1	34	(0)	2414331
36	13.4	1.5	0.0	chr21	39312939	39313004	(7396979)	+	(CGGGGGG)n	Simple_repeat	1	67	(0)	2414332
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
17	18.5	0.0	0.0	chr21	39349263	39349293	(7360690)	+	(C)n	Simple_repeat	1	31	(0)	2414411
16	24.9	0.0	0.0	chr21	39387664	39387701	(7322282)	+	(CC)n	Simple_repeat	1	38	(0)	2414498
180	22.4	16.9	0.0	chr21	39387889	39387937	(7322046)	C	MIRb	SINE/MIR	(28)	240	182	2414499
1440	13.9	3.8	0.9	chr21	39388093	39388322	(7321661)	+	AluSz	SINE/Alu	1	237	(75)	2414500
267	28.7	1.7	4.2	chr21	39715569	39715688	(6994295)	C	L2a	LINE/L2	(1)	3425	3309	2415070
1787	15.4	2.9	2.3	chr21	41850452	41850756	(4859227)	+	AluJr	SINE/Alu	1	307	(5)	2418074
21	23.4	5.6	2.1	chr21	42010422	42010510	(4699473)	+	G-rich	Low_complexity	1	94	(0)	2418307
2143	10.6	0.7	3.5	chr21	42402522	42402833	(4307150)	C	AluSx	SINE/Alu	(8)	304	2	2418830
2012	24.5	9.5	5.0	chr21	42402834	42403107	(4306876)	+	L1ME3	LINE/L1	5781	6049	(113)	2418827
484	13.6	15.8	14.6	chr21	42403111	42403316	(4306667)	C	MER20	DNA/hAT-Charlie	(0)	219	11	2418831
290	23.2	3.1	2.1	chr21	42403349	42403445	(4306538)	+	L1ME3	LINE/L1	6076	6173	(0)	2418827
70	0.0	0.0	0.0	chr21	42530596	42530655	(4179328)	+	(AC)n	Simple_repeat	1	60	(0)	2419010
2196	10.6	0.7	1.0	chr21	42972547	42972848	(3737135)	C	AluSz	SINE/Alu	(11)	301	1	2419662
3679	14.9	1.3	7.1	chr21	42972849	42973199	(3736784)	C	MER41B	LTR/ERV1	(277)	357	1	2419661
498	18.8	0.8	10.5	chr21	42973200	42973237	(3736746)	+	MER45A	DNA/hAT-Tip100	129	166	(12)	2419660
2511	6.8	0.7	0.0	chr21	43660282	43660591	(3049392)	+	AluSp	SINE/Alu	1	312	(1)	2420582
255	30.8	11.5	2.1	chr21	43660696	43660842	(3049141)	C	L2c	LINE/L2	(326)	3061	2900	2420583
2164	13.5	0.3	0.3	chr21	43732736	43733047	(2976936)	C	AluJb	SINE/Alu	(0)	312	1	2420718
23	16.7	0.0	0.0	chr21	43733238	43733277	(2976706)	+	(C)n	Simple_repeat	1	40	(0)	2420719
16	21.7	3.6	1.8	chr21	43733523	43733580	(2976403)	+	(ACCCTC)n	Simple_repeat	1	59	(0)	2420720
281	29.4	15.2	1.6	chr21	43814997	43815245	(2894738)	C	L2a	LINE/L2	(184)	3242	2954	2420846
942	24.6	5.1	0.0	chr21	43815448	43815728	(2894255)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	95	2420847
2002	14.3	1.3	2.5	chr21	43863827	43864140	(2845843)	+	AluJo	SINE/Alu	2	311	(1)	2420950
29	17.2	1.5	1.5	chr21	43865152	43865240	(2844743)	+	(GGCGGAG)n	Simple_repeat	1	130	(32)	2420951
14	20.1	0.0	7.5	chr21	43865241	43865293	(2844690)	+	(GCCGG)n	Simple_repeat	1	53	(0)	2420952
29	17.2	1.5	1.5	chr21	43865294	43865313	(2844670)	+	(GGCGGAG)n	Simple_repeat	131	162	(0)	2420951
14	26.9	1.8	1.8	chr21	43865508	43865562	(2844421)	+	G-rich	Low_complexity	1	56	(0)	2420953
13	24.8	5.7	2.7	chr21	43865646	43865715	(2844268)	+	(GCCGG)n	Simple_repeat	1	74	(0)	2420954
16	0.0	0.0	0.0	chr21	43866121	43866137	(2843846)	+	(T)n	Simple_repeat	1	17	(0)	2420955
1542	14.0	8.8	0.4	chr21	43917494	43917773	(2792210)	C	LTR36	LTR/ERV1	(0)	611	306	2421042
1404	16.9	4.5	1.3	chr21	43918240	43918538	(2791445)	C	LTR36	LTR/ERV1	(302)	309	1	2421042
2370	8.5	1.0	0.0	chr21	44067840	44068134	(2641849)	+	AluSx1	SINE/Alu	1	298	(14)	2421279
37	0.0	0.0	0.0	chr21	44299198	44299229	(2410754)	+	(AC)n	Simple_repeat	1	32	(0)	2421588
280	20.9	1.5	0.0	chr21	44299424	44299490	(2410493)	C	L1ME3A	LINE/L1	(29)	6144	6077	2421589
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
553	26.8	3.2	0.0	chr21	44334592	44334744	(2375239)	C	MIR	SINE/MIR	(79)	183	26	2421612
4420	26.2	7.0	1.9	chr21	45065695	45067517	(1642466)	+	L1ME3A	LINE/L1	3795	5710	(463)	2422486
921	28.0	3.1	2.2	chr21	45067523	45067840	(1642143)	+	L1ME3A	LINE/L1	5850	6170	(3)	2422486
240	30.2	7.0	3.2	chr21	45255843	45255965	(1454018)	+	MLT1B	LTR/ERVL-MaLR	459	586	(9)	2422685
12	23.1	0.0	4.5	chr21	45359452	45359495	(1350488)	+	(CCCCTCA)n	Simple_repeat	1	44	(0)	2422786
294	19.4	6.9	1.1	chr21	45591254	45592117	(1117866)	+	(CA)n	Simple_repeat	1	924	(0)	2422970
343	33.8	6.3	5.9	chr21	46603066	46603301	(106682)	+	L1M5	LINE/L1	4559	4795	(1351)	2424172
327	35.2	5.6	5.9	chr22	16586065	16586351	(34232117)	C	MamGypLTR2b	LTR/Gypsy	(635)	287	2	2427549
506	18.0	0.0	0.0	chr22	16586425	16586513	(34231955)	+	Alu	SINE/Alu	220	308	(3)	2427550
15	20.4	0.0	2.4	chr22	16601640	16601680	(34216788)	+	(GAGC)n	Simple_repeat	1	41	(0)	2427583
16	24.2	0.0	0.0	chr22	16601729	16601772	(34216696)	+	(CCGCGCC)n	Simple_repeat	1	44	(0)	2427584
19	16.5	7.4	0.0	chr22	16601829	16601882	(34216586)	+	(GCCC)n	Simple_repeat	1	58	(0)	2427585
1147	30.1	4.0	2.9	chr22	16679923	16680470	(34137998)	+	L1MC4a	LINE/L1	40	593	(5807)	2427686
319	31.2	4.2	3.0	chr22	16680558	16680984	(34137484)	+	L1MC4a	LINE/L1	3055	3486	(2833)	2427686
1415	21.6	6.9	0.0	chr22	17889545	17889827	(32928641)	+	AluJo	SINE/Alu	1	304	(8)	2429846
376	23.0	16.0	0.0	chr22	17913952	17914081	(32904387)	+	MIRb	SINE/MIR	109	267	(1)	2429876
410	30.8	7.4	3.9	chr22	19069527	19069786	(31748682)	C	L1ME4a	LINE/L1	(189)	5935	5666	2431379
3580	17.7	4.3	3.2	chr22	19109050	19109781	(31708687)	+	L1MB2	LINE/L1	5402	6145	(26)	2431458
294	27.2	10.7	2.3	chr22	19151274	19151401	(31667067)	+	MIR	SINE/MIR	3	142	(120)	2431512
351	36.9	4.5	1.4	chr22	19151881	19152163	(31666305)	+	L2	LINE/L2	2246	2537	(882)	2431513
189	25.7	6.3	0.0	chr22	19201730	19201803	(31616665)	+	L2a	LINE/L2	503	581	(2838)	2431602
190	37.9	16.0	3.1	chr22	19201805	19202472	(31615996)	+	L2a	LINE/L2	699	1468	(1951)	2431602
867	31.6	20.9	2.2	chr22	19202723	19203032	(31615436)	+	L2a	LINE/L2	1406	1813	(1606)	2431602
3659	12.5	1.5	0.0	chr22	19207567	19208087	(31610381)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	2431611
2559	8.0	0.0	0.0	chr22	19243686	19243996	(31574472)	C	AluYm1	SINE/Alu	(0)	311	1	2431651
1049	15.9	3.2	0.0	chr22	19244273	19244454	(31574014)	+	L1MB7	LINE/L1	5825	6012	(172)	2431652
241	30.2	13.5	0.0	chr22	19290736	19290831	(31527637)	+	MIRb	SINE/MIR	37	147	(121)	2431741
15	4.8	0.0	0.0	chr22	19291658	19291679	(31526789)	+	(CGG)n	Simple_repeat	1	22	(0)	2431742
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
1640	16.3	1.5	1.8	chr22	19304274	19304377	(31514091)	C	AluJo	SINE/Alu	(193)	119	19	2431765
1831	15.2	0.3	3.5	chr22	19304400	19304714	(31513754)	C	AluJb	SINE/Alu	(6)	306	2	2431767
9531	13.2	2.0	2.6	chr22	19304715	19305134	(31513334)	+	PRIMAX-int	LTR/ERV1	1975	2386	(1716)	2431757
2382	10.7	0.0	0.0	chr22	19396234	19396541	(31421927)	+	AluSq	SINE/Alu	1	308	(5)	2431927
229	28.7	4.7	0.0	chr22	19419164	19419264	(31399204)	+	L2a	LINE/L2	2418	2523	(896)	2431969
876	25.5	19.5	2.6	chr22	19419272	19419722	(31398746)	+	L2a	LINE/L2	2871	3415	(11)	2431969
4132	12.8	5.8	0.4	chr22	19632293	19633000	(31185468)	C	LTR1A2	LTR/ERV1	(1)	836	89	2432348
1749	16.5	0.3	2.9	chr22	19660902	19661216	(31157252)	+	AluJo	SINE/Alu	5	311	(1)	2432386
62	3.0	1.5	0.0	chr22	19661502	19661569	(31156899)	+	(CTTC)n	Simple_repeat	1	69	(0)	2432387
1767	18.8	0.7	0.0	chr22	19661587	19661890	(31156578)	C	AluJr	SINE/Alu	(6)	306	1	2432388
4219	15.6	2.2	4.6	chr22	19664485	19664958	(31153510)	+	L1MC1	LINE/L1	5511	5973	(360)	2432394
2009	11.4	0.0	1.0	chr22	19664959	19665255	(31153213)	+	AluSz6	SINE/Alu	2	295	(17)	2432395
223	34.1	3.9	0.8	chr22	19740153	19740276	(31078192)	+	L2b	LINE/L2	3029	3156	(219)	2432493
18	15.4	0.0	0.0	chr22	19760676	19760711	(31057757)	+	G-rich	Low_complexity	1	36	(0)	2432510
52	24.1	3.9	3.8	chr22	19760957	19761161	(31057307)	+	(CGC)n	Simple_repeat	1	213	(0)	2432511
333	34.0	8.4	2.1	chr22	19797415	19797603	(31020865)	+	L1M4	LINE/L1	3824	4025	(2121)	2432553
2124	10.0	1.4	0.4	chr22	19839597	19839875	(30978593)	+	AluSx1	SINE/Alu	1	282	(30)	2432598
40	2.5	0.0	0.0	chr22	19839876	19839916	(30978552)	+	(AAT)n	Simple_repeat	1	41	(0)	2432599
1882	14.3	2.0	2.7	chr22	19839917	19840076	(30978392)	+	AluJo	SINE/Alu	142	295	(17)	2432597
748	16.8	4.2	0.7	chr22	19840078	19840215	(30978253)	C	MER44A	DNA/TcMar-Tigger	(196)	143	1	2432596
2535	21.6	6.1	3.3	chr22	19840224	19840528	(30977940)	+	L1MC3	LINE/L1	6992	7316	(469)	2432600
16	16.2	2.3	2.3	chr22	19941706	19941753	(30876715)	+	(GCGCCGC)n	Simple_repeat	1	48	(0)	2432712
12	20.7	0.0	2.9	chr22	19941852	19941886	(30876582)	+	(GCCGG)n	Simple_repeat	1	35	(0)	2432713
180	29.3	5.7	9.2	chr22	19988004	19988112	(30830356)	C	MIRb	SINE/MIR	(123)	145	41	2432770
184	23.1	0.0	0.0	chr22	19988226	19988264	(30830204)	+	MIRc	SINE/MIR	112	150	(118)	2432771
275	30.0	4.2	2.3	chr22	19994077	19995352	(30823116)	+	(GATG)n	Simple_repeat	1	1330	(0)	2432773
8520	17.9	2.8	2.8	chr22	20003064	20004342	(30814126)	+	L1MB2	LINE/L1	3320	4608	(1532)	2432779
915	22.8	2.4	0.0	chr22	20004343	20004504	(30813964)	+	AluJr	SINE/Alu	137	302	(10)	2432780
8520	17.3	5.3	2.6	chr22	20004505	20005537	(30812931)	+	L1MB2	LINE/L1	4609	5662	(509)	2432779
2328	9.7	0.0	1.0	chr22	20048646	20048944	(30769524)	C	AluSc	SINE/Alu	(13)	296	1	2432844
1477	27.7	9.5	3.5	chr22	20048945	20049378	(30769090)	C	L1M4	LINE/L1	(980)	5166	4731	2432843
1855	16.1	0.0	1.7	chr22	20129929	20130220	(30688248)	+	AluJb	SINE/Alu	1	287	(25)	2432940
15	14.3	2.4	4.7	chr22	20131119	20131160	(30687308)	+	(GCCCC)n	Simple_repeat	1	43	(0)	2432941
6757	8.3	6.5	1.5	chr22	20391615	20392922	(30425546)	C	LTR12C	LTR/ERV1	(0)	1322	1	2433230
1172	14.2	0.0	0.6	chr22	20392949	20393117	(30425351)	+	AluJb	SINE/Alu	124	291	(21)	2433231
391	9.6	0.0	0.0	chr22	20418674	20418725	(30399743)	+	AluSz6	SINE/Alu	175	226	(86)	2433284
1388	8.6	0.0	0.0	chr22	20418726	20418900	(30399568)	C	AluSz	SINE/Alu	(137)	175	1	2433285
54	0.0	0.0	0.0	chr22	20418967	20419012	(30399456)	+	(AC)n	Simple_repeat	1	46	(0)	2433286
234	32.2	11.4	3.2	chr22	20437106	20437385	(30381083)	+	L2b	LINE/L2	2931	3237	(150)	2433314
2317	8.6	0.0	0.3	chr22	20445202	20445505	(30372963)	C	AluSg4	SINE/Alu	(7)	303	1	2433325
869	18.0	1.2	1.8	chr22	20445577	20445743	(30372725)	C	AluJr	SINE/Alu	(9)	303	138	2433326
1933	14.6	1.0	0.0	chr22	20445753	20446060	(30372408)	C	AluJb	SINE/Alu	(1)	311	1	2433327
232	17.4	0.0	8.0	chr22	20546084	20546133	(30272335)	C	L1MC5a	LINE/L1	(345)	2432	2387	2433532
1190	25.6	9.8	0.8	chr22	20642953	20643306	(30175162)	+	MLT1K	LTR/ERVL-MaLR	199	587	(8)	2433678
2531	6.3	0.3	0.0	chr22	20643307	20643606	(30174862)	C	AluY	SINE/Alu	(10)	301	1	2433679
325	32.5	7.5	1.9	chr22	20968268	20968446	(29850022)	+	MIRb	SINE/MIR	9	202	(66)	2434341
2408	8.9	1.0	0.0	chr22	20972123	20972424	(29846044)	+	AluSp	SINE/Alu	1	305	(8)	2434349
2305	10.8	0.0	0.3	chr22	21039509	21039813	(29778655)	+	AluSc	SINE/Alu	1	304	(5)	2434440
2477	25.8	5.6	4.6	chr22	21039814	21040313	(29778155)	+	MER34-int	LTR/ERV1	1247	1754	(6453)	2434437
1539	13.8	11.8	2.6	chr22	21092342	21092609	(29725859)	C	AluJb	SINE/Alu	(15)	297	2	2434548
278	31.7	0.0	0.0	chr22	21092801	21092882	(29725586)	+	L2c	LINE/L2	3246	3327	(60)	2434549
289	29.3	3.5	0.0	chr22	21093079	21093160	(29725308)	+	MLT1O	LTR/ERVL-MaLR	123	207	(335)	2434550
7419	8.6	1.4	0.2	chr22	21093340	21094329	(29724139)	+	LTR5B	LTR/ERVK	1	1002	(0)	2434551
2253	15.9	4.6	2.6	chr22	21109837	21110302	(29708166)	C	L1MA7	LINE/L1	(0)	6291	5816	2434593
1075	17.5	1.9	0.0	chr22	21110304	21110509	(29707959)	+	L1M2	LINE/L1	5386	5595	(696)	2434594
1140	14.8	0.5	3.2	chr22	21110512	21110700	(29707768)	+	AluSx	SINE/Alu	118	301	(11)	2434595
1048	15.2	2.2	0.6	chr22	21110702	21110880	(29707588)	+	L1M2	LINE/L1	5612	5793	(498)	2434594
2514	6.9	0.0	0.3	chr22	21110883	21111202	(29707266)	C	L1PA6	LINE/L1	(11)	6143	5825	2434596
15	25.6	0.0	2.1	chr22	21445581	21445628	(29372840)	+	(GCA)n	Simple_repeat	1	48	(0)	2435174
2244	11.7	0.0	0.0	chr22	21454934	21455231	(29363237)	C	AluSx4	SINE/Alu	(12)	298	1	2435190
1661	14.9	0.0	9.5	chr22	21556426	21556761	(29261707)	C	AluJb	SINE/Alu	(8)	304	1	2435412
2150	10.5	1.3	0.0	chr22	21556778	21557073	(29261395)	+	AluSg	SINE/Alu	1	300	(10)	2435413
1636	20.9	0.0	0.7	chr22	21557083	21557388	(29261080)	+	AluJb	SINE/Alu	1	304	(8)	2435414
1244	18.2	0.0	2.4	chr22	21610381	21610627	(29207841)	+	L1MC1	LINE/L1	6093	6333	(0)	2435526
255	3.3	0.0	0.0	chr22	21701434	21701463	(29117005)	+	U6	snRNA	1	30	(77)	2435705
884	19.9	0.0	0.0	chr22	21701466	21701611	(29116857)	C	AluJr	SINE/Alu	(7)	305	160	2435706
241	21.3	6.2	1.6	chr22	21786689	21786750	(29031718)	C	MLT1E3	LTR/ERVL-MaLR	(432)	192	128	2435886
270	14.7	0.0	2.8	chr22	21786749	21786803	(29031665)	+	MER66C	LTR/ERV1	385	422	(133)	2435887
331	25.0	0.6	10.9	chr22	21786816	21786951	(29031517)	C	MLT1E2	LTR/ERVL-MaLR	(458)	195	3	2435888
634	22.1	20.3	0.0	chr22	21787074	21787277	(29031191)	C	L1MC	LINE/L1	(994)	5152	4897	2435889
4642	16.4	8.7	2.6	chr22	21802736	21803763	(29014705)	C	L1MB8	LINE/L1	(9)	6169	4986	2435927
367	26.7	7.9	5.0	chr22	21807254	21807431	(29011037)	C	MIR3	SINE/MIR	(9)	199	20	2435933
571	29.8	10.0	4.1	chr22	21808182	21808668	(29009800)	C	Tigger10	DNA/TcMar-Tigger	(268)	1576	1058	2435934
2201	9.2	3.1	0.0	chr22	21820339	21820621	(28997847)	C	AluSg	SINE/Alu	(18)	292	1	2435969
2651	4.0	0.0	0.3	chr22	21820814	21821116	(28997352)	C	AluY	SINE/Alu	(9)	302	1	2435970
9489	5.9	1.6	7.9	chr22	21847028	21848451	(28970017)	+	SVA_B	Retroposon/SVA	52	1383	(0)	2436037
787	24.3	1.1	0.0	chr22	21848701	21848889	(28969579)	+	L1ME3D	LINE/L1	579	769	(5466)	2436038
2189	10.1	2.7	0.0	chr22	21916936	21917221	(28901247)	+	AluSc	SINE/Alu	1	294	(15)	2436222
23	9.8	0.0	0.0	chr22	22061681	22061713	(28756755)	+	(TG)n	Simple_repeat	1	33	(0)	2436427
390	30.5	6.3	2.5	chr22	22072616	22072736	(28745732)	C	L2b	LINE/L2	(1)	3374	3249	2436440
26	3.4	0.0	0.0	chr22	22072855	22072884	(28745584)	+	(TTTTG)n	Simple_repeat	1	30	(0)	2436441
321	25.0	12.6	2.4	chr22	22090161	22090324	(28728144)	+	L1MEg1	LINE/L1	3067	3249	(4084)	2436460
329	27.9	2.9	1.2	chr22	22090385	22090551	(28727917)	+	L1MEg1	LINE/L1	3369	3538	(3699)	2436460
1798	16.7	0.7	2.6	chr22	22090568	22090879	(28727589)	+	AluJb	SINE/Alu	7	312	(0)	2436461
752	28.2	3.2	6.0	chr22	22111752	22112005	(28706463)	+	MSTD	LTR/ERVL-MaLR	146	428	(0)	2436490
550	26.3	3.4	2.0	chr22	22133990	22134860	(28683608)	+	ALR/Alpha	Satellite/centr	1	882	(0)	2436520
925	27.5	9.2	2.2	chr22	22490768	22491169	(28327299)	+	L2a	LINE/L2	2994	3426	(0)	2436927
61	3.4	0.0	0.0	chr22	22532760	22532820	(28285648)	+	(TG)n	Simple_repeat	1	61	(0)	2437023
2217	7.8	0.0	3.4	chr22	22532821	22533114	(28285354)	C	AluY	SINE/Alu	(27)	284	1	2437024
798	20.9	4.4	0.0	chr22	22533118	22533270	(28285198)	C	AluJb	SINE/Alu	(18)	294	135	2437025
404	15.6	7.7	4.0	chr22	22533287	22533386	(28285082)	+	MER5B	DNA/hAT-Charlie	75	178	(0)	2437026
430	35.3	11.6	2.8	chr22	22574539	22575103	(28243365)	C	L2	LINE/L2	(349)	3070	2450	2437103
225	33.3	3.9	0.0	chr22	22575281	22575379	(28243089)	C	L2a	LINE/L2	(16)	3410	3308	2437104
3234	20.6	1.4	7.7	chr22	22582929	22583840	(28234628)	C	L1MA10	LINE/L1	(10)	6324	5471	2437115
199	20.5	0.7	0.7	chr22	22652423	22652841	(28165627)	+	(GT)n	Simple_repeat	1	422	(0)	2437226
23884	7.3	1.4	0.6	chr22	22978161	22981443	(27837025)	+	HUERS-P3b-int	LTR/ERV1	3073	6592	(596)	2437603
115	0.0	1.0	0.0	chr22	22991323	22991426	(27827042)	+	(AGAGAGGG)n	Simple_repeat	1	105	(0)	2437621
25	23.5	1.3	3.8	chr22	22991427	22991439	(27827029)	+	GA-rich	Low_complexity	65	77	(0)	2437622
27	39.7	0.0	0.0	chr22	22991459	22991560	(27826908)	+	(AT)n	Simple_repeat	1	102	(0)	2437623
2656	6.5	1.2	0.0	chr22	22991712	22992048	(27826420)	+	L1PA6	LINE/L1	5811	6151	(3)	2437624
3205	24.0	7.3	5.4	chr22	22995226	22996470	(27821998)	+	L1M4a1	LINE/L1	319	1841	(738)	2437626
15	26.1	0.0	4.9	chr22	23401766	23401826	(27416642)	+	G-rich	Low_complexity	1	61	(0)	2438237
2376	8.7	0.3	0.3	chr22	24805407	24805716	(26012752)	C	AluSz	SINE/Alu	(1)	311	2	2440683
17	7.7	0.0	3.3	chr22	24805729	24805758	(26012710)	+	(AAT)n	Simple_repeat	1	30	(0)	2440684
344	22.6	0.9	11.7	chr22	24805800	24805919	(26012549)	C	MIRb	SINE/MIR	(45)	223	117	2440685
25	25.3	2.5	1.2	chr22	24806217	24806297	(26012171)	+	(CGC)n	Simple_repeat	1	83	(0)	2440686
28	19.7	2.6	1.2	chr22	28933705	28933752	(21884716)	+	(CACCCC)n	Simple_repeat	1	50	(0)	2449592
31	0.0	0.0	0.0	chr22	28933753	28933779	(21884689)	+	(CT)n	Simple_repeat	1	27	(0)	2449593
28	19.7	2.6	1.2	chr22	28933780	28933813	(21884655)	+	(CACCCC)n	Simple_repeat	1	34	(0)	2449594
424	20.0	0.0	0.0	chr22	29152701	29152775	(21665693)	C	AluJb	SINE/Alu	(8)	304	230	2449978
3581	13.4	3.1	3.0	chr22	29152776	29153407	(21665061)	C	MER41B	LTR/ERV1	(38)	596	1	2449979
1666	16.4	5.6	2.5	chr22	29948824	29949098	(20869370)	+	AluJb	SINE/Alu	2	285	(27)	2451699
54	0.0	0.0	0.0	chr22	29949099	29949144	(20869324)	+	(AC)n	Simple_repeat	1	46	(0)	2451700
2168	10.0	0.0	2.8	chr22	29949207	29949495	(20868973)	+	AluSx1	SINE/Alu	2	282	(30)	2451701
189	23.5	8.9	0.0	chr22	30560633	30560683	(20257785)	+	MIR3	SINE/MIR	112	167	(41)	2452909
2195	12.6	0.3	0.0	chr22	30560942	30561243	(20257225)	C	AluSx1	SINE/Alu	(9)	303	1	2452910
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
19	16.8	0.0	0.0	chr22	30635690	30635695	(20182773)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2453064
15	17.6	0.0	0.0	chr22	30635696	30635727	(20182741)	+	(GGC)n	Simple_repeat	1	32	(0)	2453065
12	15.3	3.5	0.0	chr22	30635736	30635764	(20182704)	+	(GCGCC)n	Simple_repeat	1	30	(0)	2453066
23	33.0	0.0	2.9	chr22	30969596	30969698	(19848770)	+	(CGG)n	Simple_repeat	1	103	(0)	2453683
391	24.6	3.3	2.5	chr22	30969851	30969971	(19848497)	+	MIR1_Amn	SINE/MIR	21	142	(126)	2453684
188	19.2	7.1	5.5	chr22	30969992	30970046	(19848422)	+	MIRc	SINE/MIR	213	268	(0)	2453685
315	22.4	18.9	0.9	chr22	31123337	31123444	(19695024)	+	MIR3	SINE/MIR	20	151	(57)	2454068
15	20.0	0.0	0.0	chr22	31291453	31291481	(19526987)	+	(C)n	Simple_repeat	1	29	(0)	2454449
13	8.5	4.0	0.0	chr22	31291632	31291656	(19526812)	+	(GGA)n	Simple_repeat	1	26	(0)	2454450
17	20.2	4.8	4.6	chr22	31346017	31346078	(19472390)	+	(CG)n	Simple_repeat	1	65	(0)	2454547
44	24.2	3.4	4.3	chr22	31346131	31346309	(19472159)	+	(GGC)n	Simple_repeat	1	185	(0)	2454548
13	28.1	3.6	0.0	chr22	31346606	31346661	(19471807)	+	(CACTCCC)n	Simple_repeat	1	58	(0)	2454549
12	20.1	0.0	2.8	chr22	31631011	31631046	(19187422)	+	G-rich	Low_complexity	1	36	(0)	2455233
23	25.2	1.4	1.4	chr22	35371884	35371955	(15446513)	+	(CCCGC)n	Simple_repeat	1	73	(0)	2462817
12	18.3	0.0	3.0	chr22	35840509	35840541	(14977927)	+	(CCCCTC)n	Simple_repeat	1	33	(0)	2463826
38	5.0	0.0	0.0	chr22	35840616	35840657	(14977811)	+	(GT)n	Simple_repeat	1	42	(0)	2463827
445	31.1	6.2	3.2	chr22	36481120	36481308	(14337160)	C	MIRb	SINE/MIR	(29)	239	45	2465155
13	15.9	0.0	0.0	chr22	36481469	36481496	(14336972)	+	(CCGC)n	Simple_repeat	1	28	(0)	2465156
2078	7.2	3.6	0.0	chr22	36481703	36481993	(14336475)	C	AluSc	SINE/Alu	(0)	309	5	2465157
2135	9.2	0.0	0.0	chr22	37031474	37031745	(13786723)	C	AluSg	SINE/Alu	(36)	274	3	2466354
354	29.9	5.6	2.2	chr22	37031750	37031793	(13786675)	+	MIRc	SINE/MIR	127	169	(99)	2466355
286	17.6	5.5	0.0	chr22	37230590	37230657	(13587811)	+	MIRb	SINE/MIR	60	131	(137)	2466761
243	28.6	3.0	1.0	chr22	37230740	37230838	(13587630)	+	L2c	LINE/L2	3107	3207	(180)	2466762
15	17.9	0.0	0.0	chr22	37230903	37230934	(13587534)	+	(TAC)n	Simple_repeat	1	32	(0)	2466763
685	31.6	1.7	0.9	chr22	37230940	37231166	(13587302)	C	MIR	SINE/MIR	(20)	242	14	2466764
299	32.5	7.6	5.7	chr22	37244542	37244786	(13573682)	C	L2b	LINE/L2	(16)	3359	3110	2466797
306	30.6	11.3	0.0	chr22	37563260	37563393	(13255075)	+	MIRc	SINE/MIR	60	210	(58)	2467533
232	23.9	5.2	4.1	chr22	37563722	37563824	(13254644)	C	MIRb	SINE/MIR	(56)	174	70	2467534
11	14.0	0.0	8.1	chr22	37675389	37675425	(13143043)	+	(GGAGAT)n	Simple_repeat	1	37	(0)	2467797
407	32.0	3.8	3.8	chr22	37675741	37675925	(13142543)	+	MIR3	SINE/MIR	16	200	(8)	2467798
188	19.1	8.7	0.0	chr22	37803061	37803102	(13015366)	+	MIRc	SINE/MIR	217	262	(6)	2468118
1991	28.1	5.8	8.6	chr22	38240103	38241407	(12577061)	+	HAL1	LINE/L1	822	2088	(419)	2469083
28	0.0	0.0	0.0	chr22	38317283	38317308	(12501160)	+	(GCC)n	Simple_repeat	1	26	(0)	2469241
13	10.1	5.9	2.8	chr22	38317314	38317347	(12501121)	+	(GCTCTG)n	Simple_repeat	1	36	(0)	2469242
30	0.0	0.0	0.0	chr22	38317348	38317375	(12501093)	+	(CGC)n	Simple_repeat	1	28	(0)	2469243
27	27.2	2.0	2.0	chr22	38317381	38317480	(12500988)	+	(CCGC)n	Simple_repeat	1	102	(0)	2469244
17	12.2	4.0	5.8	chr22	38398524	38398573	(12419895)	+	GA-rich	Low_complexity	1	52	(0)	2469395
21	30.2	2.1	2.0	chr22	38398893	38399009	(12419459)	+	(CGCCC)n	Simple_repeat	1	117	(0)	2469396
12	4.7	4.5	0.0	chr22	38399014	38399035	(12419433)	+	(GCGA)n	Simple_repeat	1	23	(0)	2469397
14	23.1	0.0	6.9	chr22	38455963	38456020	(12362448)	+	(CCGC)n	Simple_repeat	1	58	(0)	2469535
13	13.1	2.7	5.3	chr22	38456052	38456088	(12362380)	+	G-rich	Low_complexity	1	38	(0)	2469536
447	25.5	9.6	0.1	chr22	38456378	38456541	(12361927)	C	MIR3	SINE/MIR	(30)	178	7	2469537
15	11.7	0.0	0.0	chr22	38505819	38505846	(12312622)	+	(CTCGC)n	Simple_repeat	1	28	(0)	2469636
957	16.2	6.5	5.6	chr22	38704007	38704269	(12114199)	C	MER21B	LTR/ERVL	(63)	868	621	2470142
37	0.0	2.6	0.0	chr22	38704274	38704311	(12114157)	+	(TTTTTGTT)n	Simple_repeat	1	39	(0)	2470143
1958	10.0	2.9	4.3	chr22	38704317	38704597	(12113871)	C	AluSx	SINE/Alu	(35)	277	1	2470144
16	28.1	2.9	1.4	chr22	38871969	38872038	(11946430)	+	G-rich	Low_complexity	1	72	(0)	2470436
17	16.7	0.0	4.5	chr22	38872066	38872109	(11946359)	+	(CCCCGG)n	Simple_repeat	1	44	(0)	2470437
21	21.3	0.0	0.0	chr22	39936657	39936712	(10881756)	+	GA-rich	Low_complexity	1	56	(0)	2472559
310	28.6	6.5	4.5	chr22	39936756	39936934	(10881534)	+	MER124	DNA?	48	230	(167)	2472560
25	17.7	0.0	3.3	chr22	40951150	40951210	(9867258)	+	(GCCCC)n	Simple_repeat	1	61	(0)	2474735
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
2046	12.0	0.3	1.3	chr22	41380146	41380454	(9438014)	C	AluSx1	SINE/Alu	(6)	306	1	2475776
231	29.8	13.0	0.9	chr22	41382486	41382600	(9435868)	+	MER5A	DNA/hAT-Charlie	22	152	(37)	2475779
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
1035	17.1	8.3	0.5	chr22	41673214	41673413	(9145055)	+	MER20	DNA/hAT-Charlie	1	217	(2)	2476482
2281	11.1	0.3	0.0	chr22	41673543	41673840	(9144628)	+	AluSq2	SINE/Alu	1	299	(14)	2476483
195	36.1	1.0	1.0	chr22	42444743	42444840	(8373628)	C	MIRc	SINE/MIR	(3)	265	168	2478067
294	32.1	1.9	1.9	chr22	43186558	43186665	(7631803)	+	MIRb	SINE/MIR	116	223	(45)	2479778
460	22.4	8.3	2.8	chr22	43449187	43449387	(7369081)	C	MIRc	SINE/MIR	(0)	268	45	2480259
200	30.5	0.0	0.0	chr22	43449362	43449420	(7369048)	+	L2b	LINE/L2	3272	3330	(45)	2480260
12	20.2	0.0	6.7	chr22	46054030	46054074	(4764394)	+	(AGGC)n	Simple_repeat	1	45	(0)	2484961
20	16.7	0.0	0.0	chr22	46054313	46054346	(4764122)	+	G-rich	Low_complexity	1	34	(0)	2484962
2266	4.2	0.0	1.1	chr22	46268668	46268986	(4549482)	C	AluYk3	SINE/Alu	(0)	311	1	2485280
337	34.6	6.7	1.3	chr22	46269362	46269516	(4548952)	C	MIR3	SINE/MIR	(7)	201	38	2485281
13	9.4	8.3	2.6	chr22	49936340	49936375	(882093)	+	(CGC)n	Simple_repeat	1	39	(0)	2489985
17	0.0	0.0	0.0	chr22	49936643	49936661	(881807)	+	(T)n	Simple_repeat	1	19	(0)	2489986
18	11.1	2.3	4.5	chr22	49962317	49962359	(856109)	+	(CCCT)n	Simple_repeat	1	44	(0)	2490004
15	24.4	3.8	0.0	chr22	49962360	49962365	(856103)	+	(GCTCCCC)n	Simple_repeat	5	55	(0)	2490005
262	32.5	13.2	0.0	chr22	50185531	50185727	(632741)	C	MIRc	SINE/MIR	(20)	248	22	2490309
19	4.5	0.0	0.0	chr22	50185744	50185766	(632702)	+	(G)n	Simple_repeat	1	23	(0)	2490310
23	19.0	3.9	3.8	chr22	50185845	50185921	(632547)	+	(CCCGC)n	Simple_repeat	1	80	(0)	2490311
250	34.1	2.5	1.2	chr22	50209523	50209650	(608818)	+	MIR1_Amn	SINE/MIR	70	197	(71)	2490333
18	4.7	0.0	0.0	chr22	50261996	50262017	(556451)	+	(C)n	Simple_repeat	1	22	(0)	2490383
17	18.2	2.2	2.1	chr22	50270303	50270348	(548120)	+	(GCCCCGC)n	Simple_repeat	1	47	(0)	2490386
14	23.2	4.7	3.0	chr22	50270349	50270364	(548104)	+	(CAGCCC)n	Simple_repeat	3	67	(0)	2490387
206	24.7	0.0	1.9	chr22	50271032	50271092	(547376)	+	L2b	LINE/L2	3125	3181	(194)	2490388
19	4.5	0.0	0.0	chr22	50414332	50414354	(404114)	+	(C)n	Simple_repeat	1	23	(0)	2490657
779	10.3	0.0	0.9	chr22	50582003	50582109	(236359)	C	FLAM_C	SINE/Alu	(17)	126	21	2490901
218	27.4	0.0	0.0	chr22	50582145	50582195	(236273)	+	MIRb	SINE/MIR	121	171	(97)	2490902
21	26.5	1.1	4.5	chr22	50582371	50582458	(236010)	+	(CCCGG)n	Simple_repeat	1	89	(0)	2490903
13	20.2	4.3	2.0	chr22	50582505	50582551	(235917)	+	(CTGACCC)n	Simple_repeat	1	49	(0)	2490904
582	35.9	4.8	4.2	chr3	4340395	4340848	(193954711)	C	L2c	LINE/L2	(504)	2915	2459	2498830
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
184	28.1	9.5	0.0	chr3	4493834	4493890	(193801669)	C	OldhAT1	DNA/hAT-Ac	(1409)	1439	1377	2499110
1275	15.9	0.0	2.9	chr3	4902634	4902841	(193392718)	+	AluJr	SINE/Alu	83	284	(28)	2499761
57	0.0	0.0	0.0	chr3	4902846	4902894	(193392665)	+	(AG)n	Simple_repeat	1	49	(0)	2499762
353	22.9	0.0	0.0	chr3	4987358	4987440	(193308119)	C	MIR	SINE/MIR	(101)	161	79	2499900
380	26.8	3.5	0.9	chr3	4988139	4988251	(193307308)	C	MIRb	SINE/MIR	(56)	212	97	2499905
2180	10.9	1.0	0.0	chr3	4988442	4988734	(193306825)	+	AluJb	SINE/Alu	1	296	(16)	2499906
316	25.4	13.2	0.0	chr3	5011319	5011436	(193284123)	C	MIRc	SINE/MIR	(119)	149	14	2499971
398	26.1	12.8	0.6	chr3	5016408	5016565	(193278994)	C	Charlie8	DNA/hAT-Charlie	(2157)	271	92	2499985
409	31.5	3.0	3.9	chr3	5016683	5016887	(193278672)	C	L2c	LINE/L2	(78)	3309	3107	2499986
707	28.6	0.0	1.2	chr3	5016944	5017116	(193278443)	C	MIR	SINE/MIR	(24)	238	68	2499987
2167	11.6	0.0	0.0	chr3	5017453	5017736	(193277823)	+	AluSc	SINE/Alu	1	284	(25)	2499988
216	20.3	13.8	1.6	chr3	5017751	5017839	(193277720)	C	MIR3	SINE/MIR	(137)	131	34	2499989
1828	15.7	1.3	5.3	chr3	5108113	5108430	(193187129)	C	AluSx	SINE/Alu	(7)	305	1	2500221
449	28.0	3.6	2.2	chr3	5108529	5108653	(193186906)	C	MIR3	SINE/MIR	(21)	187	60	2500222
2048	12.5	0.3	2.7	chr3	5108654	5108950	(193186609)	C	AluSx	SINE/Alu	(22)	290	1	2500223
712	17.2	0.0	1.6	chr3	5109160	5109281	(193186278)	+	AluJo	SINE/Alu	193	312	(0)	2500224
2004	12.1	4.9	0.3	chr3	5109287	5109576	(193185983)	+	AluSz6	SINE/Alu	1	304	(8)	2500225
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
1061	15.8	0.0	0.0	chr3	5151296	5151447	(193144112)	+	AluJo	SINE/Alu	136	287	(25)	2500317
2522	21.4	10.0	15.8	chr3	5151448	5151730	(193143829)	C	L1MEf	LINE/L1	(2591)	3045	2747	2500312
1261	20.2	6.4	4.3	chr3	5151731	5152007	(193143552)	C	AluJb	SINE/Alu	(27)	285	3	2500318
2522	18.8	9.6	11.3	chr3	5152008	5152512	(193143047)	C	L1MEf	LINE/L1	(3399)	2747	2236	2500312
399	28.3	9.6	3.7	chr3	5188609	5188795	(193106764)	C	MamRep1879	DNA/hAT-Tip100?	(0)	216	18	2500376
505	25.1	6.3	2.5	chr3	5428359	5428592	(192866967)	+	LTR16A1	LTR/ERVL	242	483	(12)	2500805
20105	9.9	0.8	2.7	chr3	6536641	6541943	(191753616)	C	L1P2	LINE/L1	(1163)	5298	1	2502400
17	18.2	0.0	0.0	chr3	9386371	9386401	(188909158)	+	(C)n	Simple_repeat	1	31	(0)	2507120
224	28.6	2.1	9.9	chr3	9386612	9386712	(188908847)	+	MIRc	SINE/MIR	6	98	(170)	2507121
39	2.6	0.0	0.0	chr3	9397652	9397691	(188897868)	+	(GCC)n	Simple_repeat	1	40	(0)	2507136
2052	14.1	0.0	0.0	chr3	9612133	9612422	(188683137)	C	AluSx1	SINE/Alu	(21)	291	2	2507577
790	21.5	5.9	4.0	chr3	9612457	9612510	(188683049)	C	MIRb	SINE/MIR	(57)	211	161	2507578
2241	13.2	7.9	5.5	chr3	9612511	9612927	(188682632)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2507579
383	27.7	13.4	5.9	chr3	9715577	9715829	(188579730)	C	MamRep564	Unknown	(14)	343	69	2507796
23	19.7	1.9	1.8	chr3	9769207	9769260	(188526299)	+	(AC)n	Simple_repeat	1	55	(0)	2507908
2285	9.5	0.7	0.7	chr3	10240175	10240468	(188055091)	+	AluSx4	SINE/Alu	1	294	(16)	2509021
17	4.9	0.0	0.0	chr3	10240538	10240558	(188055001)	+	(C)n	Simple_repeat	1	21	(0)	2509022
2389	10.0	0.3	0.0	chr3	10240559	10240858	(188054701)	C	AluSp	SINE/Alu	(12)	301	1	2509023
301	26.0	2.7	3.6	chr3	10319438	10319585	(187975974)	C	MIR3	SINE/MIR	(125)	143	2	2509184
40	0.0	0.0	0.0	chr3	10319762	10319795	(187975764)	+	(GA)n	Simple_repeat	1	34	(0)	2509185
66	29.1	3.3	0.0	chr3	10319816	10320028	(187975531)	+	GA-rich	Low_complexity	1	220	(0)	2509186
591	24.4	12.6	0.0	chr3	12810787	12810966	(185484593)	C	L1ME2	LINE/L1	(15)	6149	5944	2514167
809	28.1	15.5	5.3	chr3	12811067	12811446	(185484113)	C	MER115	DNA/hAT-Tip100	(265)	428	3	2514166
2097	9.7	0.0	3.9	chr3	12811572	12811881	(185483678)	C	AluSg	SINE/Alu	(12)	298	1	2514168
367	36.1	14.3	1.3	chr3	12895291	12895970	(185399589)	C	L2	LINE/L2	(634)	2785	2006	2514289
632	25.1	5.9	5.0	chr3	12948033	12948250	(185347309)	+	MIR	SINE/MIR	40	259	(3)	2514350
252	27.9	0.0	0.0	chr3	12994636	12994703	(185300856)	C	MIRc	SINE/MIR	(118)	150	83	2514433
308	21.9	11.0	0.9	chr3	12995200	12995305	(185300254)	+	MIR3	SINE/MIR	5	122	(86)	2514434
345	38.6	13.8	0.8	chr3	13084720	13085085	(185210474)	+	L3	LINE/CR1	3453	3873	(226)	2514614
417	31.8	0.0	0.8	chr3	13085122	13085251	(185210308)	C	MIRb	SINE/MIR	(70)	198	70	2514615
256	31.6	12.3	4.2	chr3	13085334	13085475	(185210084)	+	L3	LINE/CR1	3935	4089	(10)	2514614
710	29.7	9.0	4.6	chr3	13145163	13145617	(185149942)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	134	2514720
1962	16.0	1.6	0.3	chr3	13145981	13146286	(185149273)	C	AluJr	SINE/Alu	(2)	310	1	2514721
1801	18.0	17.2	1.4	chr3	13405062	13405543	(184890016)	+	MLT2B4	LTR/ERVL	117	682	(35)	2515167
306	13.0	0.0	1.8	chr3	13405567	13405621	(184889938)	+	MLT2B2	LTR/ERVL	506	559	(3)	2515168
458	28.6	14.9	0.0	chr3	13405670	13405858	(184889701)	C	MIRb	SINE/MIR	(30)	238	17	2515169
466	28.8	14.2	1.7	chr3	13461224	13461520	(184834039)	C	MamGypLTR3a	LTR/Gypsy	(586)	395	62	2515296
363	26.0	8.0	5.9	chr3	13461708	13461928	(184833631)	+	MamGypLTR3a	LTR/Gypsy	652	877	(104)	2515297
13	20.8	0.0	0.0	chr3	13648801	13648833	(184646726)	+	(TGGCC)n	Simple_repeat	1	33	(0)	2515676
623	26.4	11.5	0.4	chr3	13650226	13650472	(184645087)	C	L2c	LINE/L2	(79)	3308	3031	2515680
407	28.8	3.4	2.7	chr3	14429613	14429774	(183865785)	C	MER5A	DNA/hAT-Charlie	(6)	172	21	2516940
191	29.8	3.5	3.5	chr3	14429981	14430067	(183865492)	C	L2c	LINE/L2	(216)	3171	3085	2516941
199	16.7	4.5	0.0	chr3	14430783	14430824	(183864735)	+	MIR3	SINE/MIR	102	145	(63)	2516942
286	20.2	7.7	5.6	chr3	14430905	14430993	(183864566)	+	MIR3	SINE/MIR	114	204	(4)	2516942
210	28.8	0.0	5.7	chr3	14468650	14468719	(183826840)	C	L2a	LINE/L2	(0)	3426	3361	2517019
14	0.0	0.0	0.0	chr3	14947613	14947630	(183347929)	+	(GGC)n	Simple_repeat	1	18	(0)	2517903
17	23.7	4.4	2.8	chr3	14947927	14947994	(183347565)	+	(GGC)n	Simple_repeat	1	71	(0)	2517904
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
770	27.5	1.3	0.4	chr3	15196451	15196680	(183098879)	C	MLT1G3	LTR/ERVL-MaLR	(363)	232	1	2518351
1125	26.6	5.4	4.7	chr3	15196681	15197103	(183098456)	C	MLT1G3-int	LTR/ERVL-MaLR	(0)	1489	1064	2518351
185	28.3	0.0	0.0	chr3	15426754	15426806	(182868753)	C	L2c	LINE/L2	(51)	3336	3284	2518817
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
27	20.5	3.3	4.3	chr3	18425323	18425413	(179870146)	+	GA-rich	Low_complexity	1	94	(0)	2523272
13	18.2	0.0	0.0	chr3	18425482	18425512	(179870047)	+	G-rich	Low_complexity	1	31	(0)	2523273
20	30.1	2.4	4.2	chr3	18425756	18425861	(179869698)	+	G-rich	Low_complexity	1	104	(0)	2523274
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
15	17.5	0.0	0.0	chr3	20040242	20040274	(178255285)	+	(GCCGCC)n	Simple_repeat	1	33	(0)	2525556
3964	14.7	4.3	3.1	chr3	21670623	21671333	(176624226)	+	MER72	LTR/ERV1	1	720	(2)	2527697
14	23.6	6.1	1.4	chr3	23806671	23806736	(174488823)	+	(CCCCTGC)n	Simple_repeat	1	70	(0)	2530813
18	6.0	8.6	0.0	chr3	23945493	23945527	(174350032)	+	(CGG)n	Simple_repeat	1	38	(0)	2531074
12	23.1	2.0	4.0	chr3	23945800	23945848	(174349711)	+	(GCCCG)n	Simple_repeat	1	50	(0)	2531075
15	9.8	0.0	0.0	chr3	23946025	23946046	(174349513)	+	(GC)n	Simple_repeat	1	22	(0)	2531076
31	15.1	3.4	0.0	chr3	24238253	24238311	(174057248)	+	(GT)n	Simple_repeat	1	61	(0)	2531552
15	16.3	2.9	0.0	chr3	25665280	25665314	(172630245)	+	G-rich	Low_complexity	1	36	(0)	2533627
688	10.0	2.9	0.0	chr3	25781608	25781707	(172513852)	+	AluSq	SINE/Alu	192	294	(19)	2533800
1771	17.5	7.5	1.3	chr3	25897568	25897919	(172397640)	+	MLT2D	LTR/ERVL	1	374	(40)	2534006
54	0.0	0.0	0.0	chr3	25897920	25897965	(172397594)	+	(AC)n	Simple_repeat	1	46	(0)	2534007
1771	17.5	7.5	1.3	chr3	25897966	25898000	(172397559)	+	MLT2D	LTR/ERVL	375	414	(0)	2534006
2243	7.1	0.7	0.0	chr3	25898398	25898689	(172396870)	C	AluYc	SINE/Alu	(0)	299	1	2534008
260	37.8	3.2	3.2	chr3	30397126	30397281	(167898278)	C	L2b	LINE/L2	(299)	3076	2921	2540478
571	22.7	1.2	1.8	chr3	30397398	30397563	(167897996)	C	L1MC5a	LINE/L1	(297)	2480	2316	2540479
1590	9.1	14.4	6.0	chr3	31544686	31544937	(166750622)	+	AluSg	SINE/Alu	5	281	(29)	2542264
1158	28.6	11.0	2.1	chr3	32019598	32020128	(166275431)	C	Charlie25	DNA/hAT-Charlie	(3)	2521	1938	2543048
77	0.0	0.0	0.0	chr3	33074325	33074392	(165221167)	+	(GAAG)n	Simple_repeat	1	68	(0)	2545242
1706	12.9	9.7	0.4	chr3	33074393	33074403	(165221156)	+	AluSc5	SINE/Alu	298	308	(1)	2545241
288	23.3	7.6	8.4	chr3	33074404	33074516	(165221043)	+	MER112	DNA/hAT-Charlie	107	222	(39)	2545238
944	21.2	3.7	0.0	chr3	36893429	36893612	(161401947)	+	MER63A	DNA/hAT-Blackjack	1	191	(19)	2550577
29	29.9	2.4	1.1	chr3	36969649	36969752	(161325807)	+	G-rich	Low_complexity	1	105	(0)	2550745
227	26.3	7.3	5.0	chr3	36969755	36969874	(161325685)	+	HAL1ME	LINE/L1	2356	2478	(29)	2550741
405	24.9	18.8	5.1	chr3	37136585	37136762	(161158797)	+	MER103C	DNA/hAT-Charlie	85	292	(5)	2551026
20	7.9	0.0	0.0	chr3	37136957	37136983	(161158576)	+	(G)n	Simple_repeat	1	27	(0)	2551027
1675	17.9	5.3	0.4	chr3	37136986	37137135	(161158424)	C	AluJb	SINE/Alu	(30)	282	134	2551028
26	0.0	0.0	0.0	chr3	37137136	37137160	(161158399)	+	(TTTTTG)n	Simple_repeat	1	25	(0)	2551029
1675	17.9	5.3	0.4	chr3	37137161	37137277	(161158282)	C	AluJb	SINE/Alu	(195)	117	1	2551028
330	31.7	6.3	0.9	chr3	37137307	37137411	(161158148)	C	MIR	SINE/MIR	(138)	124	14	2551030
213	34.0	11.5	4.4	chr3	37176998	37177246	(161118313)	C	L2c	LINE/L2	(2)	3385	3117	2551104
34	29.6	1.4	3.3	chr3	37999041	37999188	(160296371)	+	(GGCGG)n	Simple_repeat	1	150	(0)	2552384
15	24.0	2.6	0.0	chr3	37999625	37999663	(160295896)	+	(CA)n	Simple_repeat	1	40	(0)	2552385
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
18	17.6	3.6	3.5	chr3	38165766	38165820	(160129739)	+	(GGC)n	Simple_repeat	1	57	(0)	2552612
13	12.7	0.0	0.0	chr3	38166141	38166166	(160129393)	+	(GTGGG)n	Simple_repeat	1	26	(0)	2552613
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
2043	11.7	1.3	0.7	chr3	38347398	38347695	(159947864)	+	AluJo	SINE/Alu	3	302	(10)	2552904
224	23.0	9.8	0.0	chr3	38453450	38453523	(159842036)	C	MIR1_Amn	SINE/MIR	(32)	198	117	2553070
16	14.8	2.6	2.5	chr3	38453820	38453860	(159841699)	+	(GCCC)n	Simple_repeat	1	41	(0)	2553071
15	13.9	0.0	0.0	chr3	38453941	38453964	(159841595)	+	(C)n	Simple_repeat	1	24	(0)	2553072
379	29.2	13.4	1.9	chr3	38949609	38949847	(159345712)	C	MIRc	SINE/MIR	(1)	267	16	2553731
19	11.7	0.0	0.0	chr3	38950058	38950085	(159345474)	+	(C)n	Simple_repeat	1	28	(0)	2553732
14	5.0	0.0	0.0	chr3	39153565	39153585	(159141974)	+	(CGG)n	Simple_repeat	1	21	(0)	2554043
234	25.5	3.8	3.8	chr3	39153892	39153997	(159141562)	C	MIR3	SINE/MIR	(40)	168	63	2554044
1101	23.4	8.6	3.7	chr3	39177204	39177634	(159117925)	C	L1ME4b	LINE/L1	(306)	586	133	2554097
25	15.9	0.0	0.0	chr3	39177702	39177743	(159117816)	+	G-rich	Low_complexity	1	42	(0)	2554098
12	14.6	0.0	5.9	chr3	39178046	39178079	(159117480)	+	G-rich	Low_complexity	1	34	(0)	2554099
25	12.9	0.0	0.0	chr3	42600912	42600955	(155694604)	+	(CCCCGC)n	Simple_repeat	1	44	(0)	2559377
192	23.8	4.5	0.0	chr3	42655112	42655174	(155640385)	+	MIR3	SINE/MIR	64	129	(79)	2559444
1050	14.2	10.6	12.8	chr3	43694877	43695157	(154600402)	C	AluJb	SINE/Alu	(5)	307	34	2560999
1015	22.0	11.3	4.3	chr3	44439689	44440058	(153855501)	C	LTR52	LTR/ERVL	(14)	407	9	2562105
362	22.3	11.1	1.8	chr3	44440065	44440228	(153855331)	+	LTR50	LTR/ERVL	588	795	(0)	2562104
288	25.4	6.3	6.9	chr3	44440468	44440598	(153854961)	C	L1ME3G	LINE/L1	(314)	610	480	2562106
4308	8.9	3.0	2.7	chr3	44441213	44441528	(153854031)	C	MER41B	LTR/ERV1	(320)	314	1	2562107
288	25.4	6.3	6.9	chr3	44441529	44441540	(153854019)	C	L1ME3G	LINE/L1	(445)	479	468	2562106
208	34.8	2.8	0.0	chr3	44441542	44441610	(153853949)	C	MIRc	SINE/MIR	(129)	139	69	2562109
258	29.0	10.3	2.2	chr3	44441693	44441914	(153853645)	C	L1ME3Cz	LINE/L1	(66)	931	690	2562110
363	23.4	0.0	9.6	chr3	45055207	45055310	(153240249)	+	MIR3	SINE/MIR	114	207	(1)	2563133
3358	13.1	3.7	2.7	chr3	45055405	45055963	(153239596)	C	MER34B	LTR/ERV1	(0)	565	1	2563134
2637	9.2	9.6	0.4	chr3	45057641	45058065	(153237494)	C	MER4A1	LTR/ERV1	(0)	594	1	2563140
225	13.3	21.1	0.0	chr3	45058066	45058109	(153237450)	C	LTR37B	LTR/ERV1	(212)	256	201	2563139
302	26.2	10.6	9.5	chr3	45058145	45058219	(153237340)	C	MLT2B4	LTR/ERVL	(0)	556	496	2563141
42	4.6	0.0	0.0	chr3	45058220	45058264	(153237295)	+	(AG)n	Simple_repeat	1	45	(0)	2563142
302	26.2	10.6	9.5	chr3	45058265	45058289	(153237270)	C	MLT2B4	LTR/ERVL	(61)	495	473	2563141
2345	10.0	0.0	0.0	chr3	45058290	45058588	(153236971)	+	AluSg	SINE/Alu	1	299	(11)	2563143
1419	17.6	9.4	5.4	chr3	45058589	45058937	(153236622)	C	MLT2B4	LTR/ERVL	(84)	472	1	2563141
385	18.2	1.1	2.2	chr3	45064319	45064408	(153231151)	C	L1ME4b	LINE/L1	(0)	892	804	2563154
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
312	31.9	11.1	3.1	chr3	45104561	45104751	(153190808)	C	MIRb	SINE/MIR	(54)	214	7	2563232
2251	10.1	2.0	0.0	chr3	45104772	45105067	(153190492)	+	AluSp	SINE/Alu	1	302	(11)	2563233
16	0.0	0.0	0.0	chr3	45210765	45210782	(153084777)	+	(CT)n	Simple_repeat	1	18	(0)	2563443
16	16.8	0.0	0.0	chr3	45210793	45210820	(153084739)	+	(GT)n	Simple_repeat	1	28	(0)	2563444
324	26.9	11.9	0.7	chr3	45210923	45211064	(153084495)	+	MIR	SINE/MIR	28	187	(75)	2563445
28	19.0	1.3	3.9	chr3	46693698	46693774	(151601785)	+	(CCCCG)n	Simple_repeat	1	78	(0)	2565798
283	21.0	4.7	6.9	chr3	46701067	46701153	(151594406)	C	MIR3	SINE/MIR	(9)	199	115	2565813
14	20.5	4.4	0.0	chr3	47371375	47371419	(150924140)	+	(ACCCCCC)n	Simple_repeat	1	47	(0)	2567016
1233	20.6	7.4	3.2	chr3	48239687	48239956	(150055603)	C	LTR8	LTR/ERV1	(402)	325	44	2569006
3961	13.1	3.7	0.6	chr3	48239957	48240580	(150054979)	C	LTR9B	LTR/ERV1	(0)	644	1	2569011
1233	20.6	7.4	3.2	chr3	48240581	48240620	(150054939)	C	LTR8	LTR/ERV1	(684)	43	1	2569006
482	14.5	0.0	0.0	chr3	48240621	48240694	(150054865)	+	Charlie1b	DNA/hAT-Charlie	450	523	(0)	2569012
17	3.0	5.1	4.9	chr3	48241525	48241541	(150054018)	+	(TATTA)n	Simple_repeat	1	15	(0)	2569013
2415	5.2	0.0	0.3	chr3	48241542	48241827	(150053732)	C	AluSg7	SINE/Alu	(22)	287	3	2569014
251	25.8	21.5	0.8	chr3	48430134	48430258	(149865301)	+	MIRb	SINE/MIR	22	179	(89)	2569301
13	9.0	4.9	7.0	chr3	49007806	49007846	(149287713)	+	(GGAGCGC)n	Simple_repeat	1	43	(0)	2570462
22	21.8	1.7	1.6	chr3	49007905	49007964	(149287595)	+	GA-rich	Low_complexity	1	61	(0)	2570463
47	2.2	0.0	0.0	chr3	49673796	49673842	(148621717)	+	(CTCACG)n	Simple_repeat	1	47	(0)	2571786
16	16.5	0.0	0.0	chr3	49806278	49806304	(148489255)	+	G-rich	Low_complexity	1	27	(0)	2572008
11	12.8	8.8	0.0	chr3	49806305	49806311	(148489248)	+	(GGAGGTG)n	Simple_repeat	1	37	(0)	2572009
12	0.0	6.9	6.5	chr3	49806658	49806686	(148488873)	+	(CTTC)n	Simple_repeat	1	31	(0)	2572010
27	22.5	0.0	0.0	chr3	50617072	50617128	(147678431)	+	G-rich	Low_complexity	1	57	(0)	2573289
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
33	0.0	0.0	0.0	chr3	51500117	51500152	(146795407)	+	(A)n	Simple_repeat	1	36	(0)	2574462
13	21.9	0.0	2.6	chr3	51967292	51967330	(146328229)	+	(CGCCC)n	Simple_repeat	1	39	(0)	2575231
19	8.8	5.6	0.0	chr3	51967329	51967378	(146328181)	+	(GCG)n	Simple_repeat	1	52	(0)	2575232
20	24.4	0.0	0.0	chr3	51967496	51967548	(146328011)	+	(CCCC)n	Simple_repeat	1	53	(0)	2575233
350	21.8	5.6	7.3	chr3	52057014	52057190	(146238369)	C	L2a	LINE/L2	(5)	3421	3199	2575387
305	27.3	13.7	0.7	chr3	52144580	52144719	(146150840)	C	MIR	SINE/MIR	(28)	234	74	2575478
58	7.6	1.2	0.0	chr3	52220335	52220418	(146075141)	+	(GGAG)n	Simple_repeat	1	85	(0)	2575602
214	29.7	1.7	9.9	chr3	52220726	52220856	(146074703)	C	L2a	LINE/L2	(95)	3331	3212	2575603
16	18.1	4.3	2.0	chr3	52299011	52299057	(145996502)	+	GA-rich	Low_complexity	1	49	(0)	2575724
364	20.4	2.9	4.8	chr3	52503588	52503706	(145791853)	+	MIRc	SINE/MIR	76	193	(69)	2575974
13	5.2	0.0	0.0	chr3	53046028	53046047	(145249512)	+	(CGG)n	Simple_repeat	1	20	(0)	2576892
23	21.5	6.9	4.0	chr3	53046088	53046203	(145249356)	+	(GCGCCC)n	Simple_repeat	1	124	(0)	2576893
2566	8.8	2.9	6.7	chr3	53197094	53197442	(145098117)	+	THE1C	LTR/ERVL-MaLR	1	350	(25)	2577181
2393	9.7	0.3	0.0	chr3	53197443	53197753	(145097806)	C	AluSx1	SINE/Alu	(0)	312	1	2577182
235	29.1	7.1	3.3	chr3	53881582	53881702	(144413857)	C	MIRb	SINE/MIR	(25)	243	118	2578191
19	8.9	3.5	8.5	chr3	53882033	53882089	(144413470)	+	(CTTCTC)n	Simple_repeat	1	59	(0)	2578192
12	13.0	0.0	9.8	chr3	53882243	53882283	(144413276)	+	G-rich	Low_complexity	1	41	(0)	2578193
503	5.5	2.7	4.0	chr3	56556521	56556595	(141738964)	C	Alu	SINE/Alu	(12)	299	226	2582350
315	28.1	9.1	0.0	chr3	56556620	56556779	(141738780)	+	L1MC5a	LINE/L1	2425	2600	(177)	2582351
75	1.5	0.0	0.0	chr3	56556843	56556910	(141738649)	+	(GT)n	Simple_repeat	1	68	(0)	2582352
2305	10.1	0.0	0.3	chr3	56630562	56630859	(141664700)	+	AluSq2	SINE/Alu	1	297	(16)	2582435
16	16.1	0.0	0.0	chr3	56630913	56630940	(141664619)	+	G-rich	Low_complexity	1	28	(0)	2582436
467	28.4	3.6	0.0	chr3	57007007	57007168	(141288391)	+	L1ME3A	LINE/L1	6006	6173	(0)	2583161
214	29.5	6.7	4.3	chr3	58237249	58237365	(140058194)	+	L2b	LINE/L2	3238	3357	(18)	2585627
38	0.0	4.8	0.0	chr3	58237463	58237504	(140058055)	+	(GGGGCG)n	Simple_repeat	1	44	(0)	2585628
19	31.7	1.0	3.8	chr3	58237792	58237895	(140057664)	+	G-rich	Low_complexity	1	105	(0)	2585629
19	22.1	0.0	0.0	chr3	66039219	66039265	(132256294)	+	(CACGCT)n	Simple_repeat	1	47	(0)	2598519
16	16.6	3.9	3.8	chr3	71064851	71064901	(127230658)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	2606644
18	18.1	0.0	0.0	chr3	71583980	71584011	(126711548)	+	(C)n	Simple_repeat	1	32	(0)	2607457
15	31.5	1.2	3.6	chr3	71584174	71584256	(126711303)	+	G-rich	Low_complexity	1	84	(0)	2607458
424	34.1	10.9	0.0	chr3	72288642	72288856	(126006703)	+	MIR	SINE/MIR	24	267	(1)	2608872
157	22.9	4.5	1.2	chr3	72337237	72337700	(125957859)	+	(GT)n	Simple_repeat	1	485	(0)	2608982
14	33.7	1.2	2.4	chr3	72446952	72447032	(125848527)	+	G-rich	Low_complexity	1	82	(0)	2609147
17	20.9	2.3	0.0	chr3	72447033	72447076	(125848483)	+	(CTCC)n	Simple_repeat	1	45	(0)	2609148
21	6.5	0.0	0.0	chr3	72996644	72996675	(125298884)	+	(CTGGGG)n	Simple_repeat	1	32	(0)	2610398
515	10.7	1.2	0.0	chr3	74267574	74267657	(124027902)	+	L1PA15	LINE/L1	6076	6160	(5)	2612529
25	23.8	4.4	1.1	chr3	98901145	98901234	(99394325)	+	(AGGAGC)n	Simple_repeat	1	94	(0)	2639604
14	28.2	0.0	1.9	chr3	98901217	98901273	(99394286)	+	G-rich	Low_complexity	1	55	(0)	2639605
3595	16.9	6.5	4.2	chr3	101530223	101530982	(96764577)	C	LTR19C	LTR/ERV1	(0)	779	1	2643122
16	28.2	0.0	0.0	chr3	107524609	107524648	(90770911)	+	GA-rich	Low_complexity	1	40	(0)	2651003
17	21.7	3.2	3.1	chr3	107524789	107524850	(90770709)	+	(GGTGG)n	Simple_repeat	1	64	(0)	2651004
16	13.2	0.0	9.8	chr3	113696289	113696339	(84599220)	+	(CCGCCC)n	Simple_repeat	1	51	(0)	2659586
18	20.7	4.2	4.0	chr3	113696340	113696359	(84599200)	+	(GCCGCCC)n	Simple_repeat	2	75	(0)	2659587
18	17.7	0.0	0.0	chr3	113696645	113696676	(84598883)	+	(C)n	Simple_repeat	1	32	(0)	2659588
17	4.9	0.0	0.0	chr3	113747007	113747027	(84548532)	+	(C)n	Simple_repeat	1	21	(0)	2659671
16	23.3	1.9	1.9	chr3	115146880	115146931	(83148628)	+	(TCCC)n	Simple_repeat	1	53	(0)	2661717
29	0.0	0.0	3.1	chr3	115146983	115147014	(83148545)	+	(GGGGC)n	Simple_repeat	1	32	(0)	2661718
13	30.1	0.0	2.0	chr3	115147076	115147126	(83148433)	+	(CCCCA)n	Simple_repeat	1	51	(0)	2661719
17	4.9	0.0	0.0	chr3	119462634	119462654	(78832905)	+	(G)n	Simple_repeat	1	21	(0)	2667613
27	0.0	6.1	0.0	chr3	119677004	119677036	(78618523)	+	(GGGGC)n	Simple_repeat	1	35	(0)	2667998
51	4.7	1.5	1.4	chr3	119677072	119677139	(78618420)	+	(AGAGGGC)n	Simple_repeat	1	69	(0)	2667999
2169	11.2	0.0	0.3	chr3	119695129	119695422	(78600137)	+	AluSz	SINE/Alu	5	297	(15)	2668023
843	27.2	3.9	9.4	chr3	119695448	119695913	(78599646)	+	MER65C	LTR/ERV1	1	439	(22)	2668022
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
221	31.3	5.6	0.0	chr3	120349899	120349965	(77945594)	+	MIRc	SINE/MIR	116	186	(82)	2669019
532	24.8	5.8	3.7	chr3	124468114	124468331	(73827228)	C	MER112	DNA/hAT-Charlie	(2)	259	37	2675329
288	27.5	13.2	1.4	chr3	124468592	124468731	(73826828)	C	MIR3	SINE/MIR	(1)	207	49	2675330
12	11.1	6.9	0.0	chr3	126477041	126477069	(71818490)	+	(CCCAC)n	Simple_repeat	1	31	(0)	2678641
271	36.9	5.7	5.4	chr3	126477071	126477385	(71818174)	+	L2c	LINE/L2	3072	3387	(0)	2678642
182	32.5	7.9	4.9	chr3	126945317	126945439	(71350120)	C	L2c	LINE/L2	(564)	2855	2729	2679312
40	17.9	13.9	3.6	chr3	126945449	126945792	(71349767)	+	G-rich	Low_complexity	1	392	(0)	2679313
30	31.0	2.9	0.0	chr3	128010889	128010991	(70284568)	+	(GT)n	Simple_repeat	1	106	(0)	2681053
377	28.6	5.2	1.3	chr3	128010993	128011141	(70284418)	+	MER67C	LTR/ERV1	7	161	(550)	2681054
432	19.9	19.9	0.0	chr3	128011154	128011334	(70284225)	C	LTR8B	LTR/ERV1	(64)	756	531	2681055
614	19.1	16.4	0.6	chr3	128011489	128011662	(70283897)	+	MER67C	LTR/ERV1	500	706	(5)	2681056
2506	8.1	13.9	22.3	chr3	128152657	128153231	(70142328)	C	LTR12F	LTR/ERV1	(0)	519	1	2681287
484	28.2	9.7	3.8	chr3	128416670	128416931	(69878628)	+	MLT1K	LTR/ERVL-MaLR	265	543	(52)	2681694
13	16.6	0.0	0.0	chr3	128726204	128726230	(69569329)	+	(GGC)n	Simple_repeat	1	27	(0)	2682345
225	15.1	3.6	1.9	chr3	128803721	128803774	(69491785)	+	L1ME3G	LINE/L1	617	671	(253)	2682501
513	26.0	1.9	1.7	chr3	128804130	128804363	(69491196)	+	LTR35B	LTR/ERV1	153	464	(141)	2682502
246	22.4	4.8	1.2	chr3	129249826	129249915	(69045644)	C	MIR3	SINE/MIR	(133)	135	43	2683413
281	32.0	1.0	3.7	chr3	129249930	129250036	(69045523)	+	MIR3	SINE/MIR	64	167	(41)	2683414
378	29.3	3.6	7.6	chr3	129250150	129250353	(69045206)	C	L2b	LINE/L2	(0)	3426	3220	2683415
348	30.2	12.5	2.6	chr3	129439246	129439439	(68856120)	+	MIRb	SINE/MIR	21	236	(32)	2683752
344	27.7	11.2	2.5	chr3	129439637	129439758	(68855801)	C	MIR3	SINE/MIR	(19)	189	56	2683753
2210	8.3	1.1	0.0	chr3	129447534	129447809	(68847750)	C	AluSg	SINE/Alu	(31)	279	1	2683775
2471	16.3	8.0	7.5	chr3	129447810	129447997	(68847562)	C	MER4E	LTR/ERV1	(403)	207	1	2683774
403	35.1	8.4	7.1	chr3	129448001	129448154	(68847405)	+	L2c	LINE/L2	3020	3185	(202)	2683776
4319	11.0	7.8	1.9	chr3	129448155	129448679	(68846880)	C	LTR9A1	LTR/ERV1	(0)	728	159	2683777
661	26.5	7.3	1.9	chr3	129597034	129597241	(68698318)	C	MIR	SINE/MIR	(29)	233	14	2684046
16	9.3	0.0	0.0	chr3	133827747	133827769	(64467790)	+	(C)n	Simple_repeat	1	23	(0)	2690542
3438	11.4	4.6	2.1	chr3	135513505	135514076	(62781483)	+	LTR8	LTR/ERV1	1	587	(104)	2692971
14	4.5	4.3	0.0	chr3	136169207	136169229	(62126330)	+	(TTG)n	Simple_repeat	1	24	(0)	2693884
20	4.3	0.0	0.0	chr3	136169229	136169252	(62126307)	+	(G)n	Simple_repeat	1	24	(0)	2693885
948	14.1	1.0	11.2	chr3	136169271	136169445	(62126114)	C	L1MA4	LINE/L1	(9)	6291	6133	2693886
2305	9.4	0.0	1.3	chr3	136169446	136169752	(62125807)	C	AluSx	SINE/Alu	(9)	303	1	2693887
15	5.8	10.5	2.4	chr3	136751804	136751841	(61543718)	+	G-rich	Low_complexity	1	42	(0)	2695002
13	9.8	9.1	0.0	chr3	136752057	136752089	(61543470)	+	(GCTC)n	Simple_repeat	1	36	(0)	2695003
224	24.4	3.7	10.3	chr3	139329689	139329775	(58965784)	+	MIRc	SINE/MIR	149	229	(39)	2699156
513	33.8	7.5	0.0	chr3	139329788	139329997	(58965562)	C	MIRb	SINE/MIR	(11)	257	31	2699157
17	4.9	0.0	0.0	chr3	141368996	141369016	(56926543)	+	(A)n	Simple_repeat	1	21	(0)	2702203
35	15.0	4.2	4.0	chr3	141486916	141487011	(56808548)	+	G-rich	Low_complexity	1	100	(0)	2702372
14	0.0	0.0	0.0	chr3	141875533	141875565	(56419994)	+	(AAC)n	Simple_repeat	1	33	(0)	2703065
1801	10.9	8.9	0.0	chr3	143004354	143004637	(55290922)	C	AluSx1	SINE/Alu	(0)	312	2	2705061
18	4.8	0.0	0.0	chr3	143005142	143005163	(55290396)	+	(T)n	Simple_repeat	1	22	(0)	2705062
30	24.7	1.2	0.0	chr3	150408250	150408330	(47887229)	+	(CGG)n	Simple_repeat	1	82	(0)	2715186
198	27.9	7.6	0.0	chr3	150733838	150733898	(47561661)	C	L2b	LINE/L2	(17)	3358	3293	2715762
13	25.5	5.5	2.6	chr3	169662638	169662710	(28632849)	+	(CGCAG)n	Simple_repeat	1	77	(0)	2741632
14	19.7	5.6	5.3	chr3	169662977	169662989	(28632570)	+	(TCTCC)n	Simple_repeat	1	73	(0)	2741633
12	24.7	3.6	3.5	chr3	169662990	169663045	(28632514)	+	(TCCC)n	Simple_repeat	1	58	(0)	2741634
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
13	14.4	3.2	0.0	chr3	170357188	170357218	(27938341)	+	G-rich	Low_complexity	1	32	(0)	2742885
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
2168	28.3	7.5	3.6	chr3	170726384	170727260	(27568299)	+	L2a	LINE/L2	858	1771	(1648)	2743500
1081	27.3	13.0	6.7	chr3	171427658	171428423	(26867136)	C	L2a	LINE/L2	(15)	3411	2493	2744506
2833	0.7	0.0	0.0	chr3	171470365	171470686	(26824873)	C	AluYk11	SINE/Alu	(0)	311	1	2744580
528	19.7	0.0	0.0	chr3	171470909	171471016	(26824543)	C	MIR3	SINE/MIR	(25)	183	79	2744581
22	3.9	0.0	0.0	chr3	171471052	171471078	(26824481)	+	(A)n	Simple_repeat	1	27	(0)	2744582
22	23.4	2.3	4.5	chr3	177197028	177197114	(21098445)	+	(CCCCCGG)n	Simple_repeat	1	89	(0)	2752764
13	9.7	0.0	0.0	chr3	177197189	177197210	(21098349)	+	(CGC)n	Simple_repeat	1	22	(0)	2752765
31	23.0	3.8	4.3	chr3	177197564	177197618	(21097941)	+	(GCG)n	Simple_repeat	1	52	(0)	2752766
28	5.8	0.0	0.0	chr3	177197619	177197654	(21097905)	+	(CGGG)n	Simple_repeat	1	36	(0)	2752767
31	23.0	3.8	4.3	chr3	177197655	177197731	(21097828)	+	(GCG)n	Simple_repeat	2	80	(0)	2752768
5275	14.4	10.8	7.2	chr3	177228006	177229116	(21066443)	C	LTR12C	LTR/ERV1	(422)	1157	2	2752832
16	9.6	0.0	0.0	chr3	177346007	177346029	(20949530)	+	(A)n	Simple_repeat	1	23	(0)	2753103
12	24.9	2.0	3.9	chr3	179148365	179148415	(19147144)	+	(TGC)n	Simple_repeat	1	52	(0)	2755688
18	28.2	1.3	2.6	chr3	179148416	179148454	(19147105)	+	(CCGCTG)n	Simple_repeat	5	92	(0)	2755689
12	5.5	0.0	0.0	chr3	179148530	179148548	(19147011)	+	(CGC)n	Simple_repeat	1	19	(0)	2755690
1130	19.0	0.0	0.0	chr3	179261583	179261782	(19033777)	+	Tigger5	DNA/TcMar-Tigger	29	228	(2178)	2755853
21	12.2	2.0	4.0	chr3	180912587	180912635	(17382924)	+	(CCCCTCC)n	Simple_repeat	1	50	(0)	2758546
67	4.0	2.6	0.0	chr3	181702036	181702113	(16593446)	+	(CA)n	Simple_repeat	1	80	(0)	2759748
228	27.2	4.6	4.6	chr3	183212841	183212948	(15082611)	C	MIRb	SINE/MIR	(5)	263	156	2762289
20	11.3	0.0	0.0	chr3	183212949	183212977	(15082582)	+	(G)n	Simple_repeat	1	29	(0)	2762290
6090	10.5	2.9	4.6	chr3	183353948	183354866	(14940693)	+	MER4D	LTR/ERV1	1	903	(0)	2762520
1122	18.8	2.8	1.4	chr3	183533363	183533570	(14761989)	C	AluJo	SINE/Alu	(101)	211	1	2762850
18	17.0	0.0	0.0	chr3	183533663	183533695	(14761864)	+	GA-rich	Low_complexity	1	33	(0)	2762851
14	21.1	2.2	2.1	chr3	183533753	183533798	(14761761)	+	(TCCTCCG)n	Simple_repeat	1	47	(0)	2762852
39	2.7	0.0	0.0	chr3	184133898	184133935	(14161624)	+	(GT)n	Simple_repeat	1	38	(0)	2764086
193	33.1	4.4	4.4	chr3	184133940	184134075	(14161484)	C	L3b	LINE/CR1	(242)	4990	4855	2764087
662	31.5	13.6	2.3	chr3	184154243	184154441	(14141118)	+	L2a	LINE/L2	3187	3425	(1)	2764116
2196	6.8	0.0	5.4	chr3	184154567	184154861	(14140698)	C	AluSp	SINE/Alu	(32)	281	3	2764118
202	29.2	7.7	6.8	chr3	184154877	184154979	(14140580)	C	L2c	LINE/L2	(7)	3380	3277	2764119
223	25.6	8.9	0.0	chr3	184157028	184157109	(14138450)	+	MIRc	SINE/MIR	160	249	(19)	2764124
270	34.0	5.4	3.0	chr3	184712466	184712629	(13582930)	C	L2	LINE/L2	(541)	2878	2711	2765172
2393	7.8	0.0	2.6	chr3	185497975	185498282	(12797277)	+	AluSx	SINE/Alu	1	300	(12)	2766482
21	18.1	6.2	1.5	chr3	185825009	185825072	(12470487)	+	(CTC)n	Simple_repeat	1	68	(0)	2767148
21	23.0	3.4	4.4	chr3	185825048	185825135	(12470424)	+	(CCGC)n	Simple_repeat	1	91	(0)	2767149
2179	10.7	0.0	0.0	chr3	186861169	186861483	(11434076)	+	AluSx1	SINE/Alu	1	312	(0)	2769133
299	30.3	3.7	3.7	chr3	186861491	186861651	(11433908)	+	L1M5	LINE/L1	3968	4128	(2018)	2769134
253	30.3	0.0	1.1	chr3	186930099	186930188	(11365371)	C	MIRb	SINE/MIR	(115)	153	65	2769259
16	9.8	0.0	0.0	chr3	187746894	187746915	(10548644)	+	(G)n	Simple_repeat	1	22	(0)	2770638
15	13.9	0.0	0.0	chr3	191329933	191329956	(6965603)	+	(G)n	Simple_repeat	1	24	(0)	2776383
38	0.0	0.0	0.0	chr3	191330297	191330329	(6965230)	+	(AC)n	Simple_repeat	1	33	(0)	2776384
239	31.1	7.2	0.0	chr3	194021892	194021981	(4273578)	+	MLT1K	LTR/ERVL-MaLR	45	141	(454)	2780384
30	0.0	0.0	0.0	chr3	194022272	194022297	(4273262)	+	(AC)n	Simple_repeat	1	26	(0)	2780385
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
18	10.7	3.3	0.0	chr3	194134845	194134874	(4160685)	+	(AC)n	Simple_repeat	1	31	(0)	2780602
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
11	21.8	2.2	4.3	chr3	194135829	194135874	(4159685)	+	A-rich	Low_complexity	1	47	(0)	2780605
406	21.1	8.4	5.6	chr3	194140531	194140699	(4154860)	+	MIR3	SINE/MIR	18	185	(23)	2780608
218	30.3	11.6	0.0	chr3	194255618	194255693	(4039866)	+	MIR3	SINE/MIR	122	207	(1)	2780828
280	26.5	6.2	8.1	chr3	194486034	194486181	(3809378)	+	MIR3	SINE/MIR	6	150	(58)	2781193
301	31.1	8.4	8.8	chr3	194486407	194486656	(3808903)	+	L1MDb	LINE/L1	511	759	(5650)	2781194
16	23.6	4.4	2.8	chr3	194486657	194486724	(3808835)	+	(CGCCGC)n	Simple_repeat	1	71	(0)	2781195
14	18.3	2.7	0.0	chr3	194486839	194486875	(3808684)	+	G-rich	Low_complexity	1	38	(0)	2781196
2194	7.2	0.0	0.4	chr3	194542794	194543057	(3752502)	+	AluSx1	SINE/Alu	1	263	(49)	2781342
3933	15.3	3.6	2.1	chr3	194543106	194543319	(3752240)	C	L1MC1	LINE/L1	(5)	6328	6117	2781343
2363	10.0	0.0	0.0	chr3	194543320	194543619	(3751940)	C	AluSx4	SINE/Alu	(10)	300	1	2781344
2747	7.9	2.1	0.5	chr3	195225657	195226025	(3069534)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2782568
244	25.0	8.0	5.2	chr3	195910030	195910126	(2385433)	+	MIR3	SINE/MIR	82	181	(27)	2783822
1844	11.1	6.8	0.0	chr3	196224413	196224673	(2070886)	+	AluSq2	SINE/Alu	1	280	(33)	2784537
52	9.9	0.0	4.3	chr3	196224688	196224781	(2070778)	+	(GGGGA)n	Simple_repeat	1	94	(0)	2784538
695	17.1	2.5	0.0	chr3	196224782	196224898	(2070661)	+	MLT1B	LTR/ERVL-MaLR	221	340	(50)	2784539
1538	14.1	11.0	0.0	chr3	196225040	196225273	(2070286)	C	AluSz	SINE/Alu	(49)	263	1	2784540
983	20.3	12.7	9.3	chr3	196517147	196517573	(1777986)	+	MER21B	LTR/ERVL	2	435	(433)	2785201
1949	10.9	0.0	2.9	chr3	196517672	196517829	(1777730)	C	AluSz	SINE/Alu	(14)	298	144	2785202
1949	10.9	0.0	2.9	chr3	196518468	196518584	(1776975)	C	AluSz	SINE/Alu	(169)	143	31	2785202
232	24.1	3.6	0.0	chr3	196518596	196518649	(1776910)	+	LTR9	LTR/ERV1	557	612	(0)	2785204
3356	19.4	2.5	1.3	chr3	196518651	196519277	(1776282)	+	HUERS-P3-int	LTR/ERV1	1	635	(8284)	2785204
28907	13.0	2.4	1.5	chr3	196519312	196520764	(1774795)	+	HUERS-P3-int	LTR/ERV1	749	2277	(6642)	2785204
13	20.0	5.0	0.0	chr3	197297909	197297948	(997611)	+	(GCGGA)n	Simple_repeat	1	42	(0)	2786665
15	25.2	0.0	3.6	chr3	197298664	197298718	(996841)	+	G-rich	Low_complexity	1	55	(0)	2786666
26	6.3	0.0	0.0	chr3	197298935	197298968	(996591)	+	(TTCA)n	Simple_repeat	1	34	(0)	2786667
170	21.3	3.4	2.5	chr3	197344956	197345427	(950132)	+	(AC)n	Simple_repeat	1	488	(0)	2786758
382	33.7	3.1	5.1	chr3	197345501	197345697	(949862)	+	L2c	LINE/L2	3195	3387	(0)	2786756
555	24.4	2.9	1.5	chr3	197444481	197444617	(850942)	C	MIRb	SINE/MIR	(105)	163	25	2786915
34	27.9	4.7	2.2	chr4	674000	674169	(189540386)	+	G-rich	Low_complexity	1	178	(0)	2789392
2393	8.5	0.0	0.0	chr4	765153	765447	(189449108)	+	AluY	SINE/Alu	2	296	(15)	2789495
434	25.8	1.4	0.0	chr4	1511746	1511909	(188702646)	+	MLT1K	LTR/ERVL-MaLR	144	253	(342)	2790269
341	32.3	1.0	0.0	chr4	1511882	1511977	(188702578)	+	MLT1K	LTR/ERVL-MaLR	144	240	(355)	2790269
40	22.4	3.2	5.0	chr4	1511995	1512149	(188702406)	+	G-rich	Low_complexity	1	160	(0)	2790270
19	18.9	10.1	3.3	chr4	1579168	1579276	(188635279)	+	(GCCCCT)n	Simple_repeat	1	120	(0)	2790314
26	16.8	2.9	2.8	chr4	1767721	1767790	(188446765)	+	(CCGCGCC)n	Simple_repeat	1	72	(0)	2790582
14	20.8	4.5	0.0	chr4	1767912	1767955	(188446600)	+	(CCCCCA)n	Simple_repeat	1	46	(0)	2790583
13	18.7	5.8	3.6	chr4	1767956	1767963	(188446592)	+	(CCGCC)n	Simple_repeat	1	55	(0)	2790584
12	24.4	2.2	2.2	chr4	2042256	2042300	(188172255)	+	G-rich	Low_complexity	1	46	(0)	2791001
19	27.7	0.0	2.9	chr4	2042365	2042435	(188172120)	+	(CCGCTG)n	Simple_repeat	1	68	(0)	2791002
16	16.3	1.8	7.1	chr4	2042488	2042564	(188171991)	+	G-rich	Low_complexity	1	72	(0)	2791003
14	21.2	0.0	4.3	chr4	2042696	2042742	(188171813)	+	(CCCCCCG)n	Simple_repeat	1	47	(0)	2791004
2514	4.5	0.0	2.9	chr4	2242780	2243089	(187971466)	+	AluSg4	SINE/Alu	1	301	(9)	2791312
284	26.6	10.1	1.1	chr4	2243205	2243364	(187971191)	C	LTR37B	LTR/ERV1	(152)	316	111	2791313
351	23.3	3.2	0.0	chr4	2395852	2395941	(187818614)	C	MER20	DNA/hAT-Charlie	(5)	214	122	2791500
2110	11.0	2.6	1.3	chr4	2483820	2484128	(187730427)	C	AluSq2	SINE/Alu	(0)	313	1	2791635
13	26.1	0.0	0.0	chr4	2536551	2536591	(187677964)	+	G-rich	Low_complexity	1	41	(0)	2791757
12	21.1	0.0	2.9	chr4	2536598	2536632	(187677923)	+	(CCCCT)n	Simple_repeat	1	35	(0)	2791758
219	33.3	5.1	0.0	chr4	3445450	3445524	(186769031)	C	MIRc	SINE/MIR	(124)	144	66	2793171
17	20.4	8.5	2.2	chr4	6782459	6782540	(183432015)	+	(CCCGCAG)n	Simple_repeat	1	89	(0)	2799089
437	33.6	8.4	6.2	chr4	7418144	7418479	(182796076)	C	L2c	LINE/L2	(20)	3367	3024	2800120
1672	23.6	7.7	3.7	chr4	7418670	7419179	(182795376)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	18	2800121
224	30.9	5.2	8.1	chr4	8159160	8159378	(182055177)	C	MIR3	SINE/MIR	(5)	225	7	2801329
4678	9.9	1.1	2.3	chr4	8243017	8243522	(181971033)	+	MER41B	LTR/ERV1	1	504	(130)	2801458
2205	10.6	0.3	0.7	chr4	8243523	8243824	(181970731)	C	AluSx1	SINE/Alu	(11)	301	1	2801459
14	17.6	2.5	2.4	chr4	10116253	10116292	(180098263)	+	(GGCAG)n	Simple_repeat	1	41	(0)	2804232
17	20.9	3.4	3.3	chr4	10116586	10116644	(180097911)	+	G-rich	Low_complexity	1	61	(0)	2804233
10410	14.7	4.9	1.6	chr4	10172162	10174126	(180040429)	C	HERVK9-int	LTR/ERVK	(4104)	1992	1	2804250
2891	10.8	6.8	1.1	chr4	10174127	10174596	(180039959)	C	MER9B	LTR/ERVK	(0)	499	1	2804250
2116	19.0	3.9	2.6	chr4	10182967	10183420	(180031135)	C	MER66B	LTR/ERV1	(0)	486	27	2804255
993	15.4	10.5	3.2	chr4	10183427	10183647	(180030908)	C	L1PA15	LINE/L1	(489)	5671	5433	2804254
373	25.4	12.8	12.8	chr4	10290352	10290757	(179923798)	C	MLT1D	LTR/ERVL-MaLR	(87)	418	13	2804312
15	0.0	0.0	0.0	chr4	10290819	10290835	(179923720)	+	(GT)n	Simple_repeat	1	17	(0)	2804313
27	0.0	0.0	0.0	chr4	10290838	10290863	(179923692)	+	(GGGGGT)n	Simple_repeat	1	26	(0)	2804314
580	17.9	4.7	0.0	chr4	10291139	10291261	(179923294)	C	MLT2B5	LTR/ERVL	(525)	192	64	2804315
377	25.6	12.9	1.8	chr4	10459030	10459200	(179755355)	+	MIRb	SINE/MIR	51	243	(25)	2804456
976	21.4	8.5	9.1	chr4	10459459	10459885	(179754670)	+	MLT1C	LTR/ERVL-MaLR	1	424	(43)	2804457
355	25.9	7.5	2.9	chr4	17324651	17324789	(172889766)	C	MIR3	SINE/MIR	(3)	205	60	2815974
2566	14.7	8.3	1.7	chr4	17809628	17810145	(172404410)	C	MER34C2	LTR/ERV1	(0)	555	1	2816976
202	32.4	3.9	0.0	chr4	26320446	26320519	(163894036)	+	L2b	LINE/L2	3298	3374	(1)	2830849
458	22.7	12.2	8.0	chr4	26860087	26860273	(163354282)	+	MIR	SINE/MIR	57	252	(10)	2831733
15	14.2	10.6	0.0	chr4	26860767	26860813	(163353742)	+	(GCG)n	Simple_repeat	1	52	(0)	2831734
16	0.0	0.0	0.0	chr4	26860925	26860942	(163353613)	+	(T)n	Simple_repeat	1	18	(0)	2831735
26	23.2	0.0	4.8	chr4	26861040	26861122	(163353433)	+	(GGC)n	Simple_repeat	1	83	(0)	2831736
13	17.3	3.9	5.7	chr4	26861187	26861237	(163353318)	+	(GCTGC)n	Simple_repeat	1	53	(0)	2831737
379	28.6	3.4	4.6	chr4	38319451	38319665	(151894890)	C	MIRb	SINE/MIR	(14)	254	37	2847578
16	0.0	0.0	0.0	chr4	38319885	38319901	(151894654)	+	(T)n	Simple_repeat	1	17	(0)	2847579
22	28.6	1.9	3.8	chr4	38664913	38665016	(151549539)	+	(CCTCCC)n	Simple_repeat	1	106	(0)	2848199
16	25.1	2.8	4.1	chr4	38664975	38665045	(151549510)	+	(CCCG)n	Simple_repeat	1	73	(0)	2848200
194	28.0	2.0	0.0	chr4	39044071	39044120	(151170435)	+	L2b	LINE/L2	3249	3299	(76)	2848877
13	19.6	0.0	0.0	chr4	39365944	39365973	(150848582)	+	(CCTT)n	Simple_repeat	1	30	(0)	2849468
1859	14.3	0.0	0.4	chr4	40054299	40054570	(150159985)	+	AluSx1	SINE/Alu	1	271	(41)	2851167
12	19.9	0.0	0.0	chr4	40056774	40056802	(150157753)	+	(CCCG)n	Simple_repeat	1	29	(0)	2851169
38	17.0	5.8	0.0	chr4	40193474	40193560	(150020995)	+	GA-rich	Low_complexity	1	92	(0)	2851462
20	25.4	1.6	1.6	chr4	41216400	41216413	(148998142)	+	(GCG)n	Simple_repeat	1	31	(33)	2853654
25	11.8	0.0	0.0	chr4	41216414	41216450	(148998105)	+	(G)n	Simple_repeat	1	37	(0)	2853655
20	25.4	1.6	1.6	chr4	41216451	41216462	(148998093)	+	(GCG)n	Simple_repeat	32	64	(0)	2853654
15	9.7	0.0	0.0	chr4	42656757	42656778	(147557777)	+	(AC)n	Simple_repeat	1	22	(0)	2855919
12	19.1	5.9	3.7	chr4	42656945	42656995	(147557560)	+	(CCGCG)n	Simple_repeat	1	54	(0)	2855920
1015	2.4	1.6	0.0	chr4	48269192	48269315	(141945240)	C	L1PA5	LINE/L1	(3)	6151	6026	2863588
21	13.3	0.0	0.0	chr4	48687487	48687525	(141527030)	+	(G)n	Simple_repeat	1	39	(0)	2864225
284	24.2	10.0	1.0	chr4	48687591	48687690	(141526865)	+	L3	LINE/CR1	2885	2994	(1105)	2864226
229	23.7	10.6	0.0	chr4	49512499	49512574	(140701981)	C	MER5A	DNA/hAT-Charlie	(6)	183	99	2865180
47	2.2	0.0	0.0	chr4	49512992	49513038	(140701517)	+	(TCTG)n	Simple_repeat	1	47	(0)	2865181
15	17.2	7.4	1.7	chr4	51843409	51843462	(138371093)	+	G-rich	Low_complexity	1	58	(0)	2865384
15	8.5	0.0	0.0	chr4	51843656	51843680	(138370875)	+	(GAGC)n	Simple_repeat	1	25	(0)	2865385
19	25.8	2.6	2.5	chr4	55546401	55546477	(134668078)	+	(CCCGCCC)n	Simple_repeat	1	79	(0)	2871091
13	13.1	0.0	0.0	chr4	55546669	55546694	(134667861)	+	(CCTTC)n	Simple_repeat	1	26	(0)	2871092
12	15.3	8.1	0.0	chr4	55546695	55546700	(134667855)	+	(CTCCCC)n	Simple_repeat	6	40	(0)	2871093
549	28.9	13.7	0.7	chr4	56389271	56389549	(133825006)	C	HAL1	LINE/L1	(2186)	321	1	2872527
967	25.6	8.0	2.1	chr4	56390019	56390405	(133824150)	+	LTR40c	LTR/ERVL	49	460	(5)	2872528
12	21.8	2.7	0.0	chr4	56908912	56908948	(133305607)	+	(CCGGCGC)n	Simple_repeat	1	38	(0)	2873606
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
3034	27.4	9.8	6.1	chr4	70937826	70938755	(119275800)	C	HAL1	LINE/L1	(1344)	1163	241	2891514
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
13	19.2	6.1	1.9	chr4	72569320	72569368	(117645187)	+	(GCTGCTG)n	Simple_repeat	1	52	(0)	2893670
16	18.9	0.0	0.0	chr4	73258286	73258321	(116956234)	+	(TCCTCG)n	Simple_repeat	1	36	(0)	2894652
23	39.8	0.0	0.0	chr4	73258320	73258377	(116956178)	+	(CGCTGC)n	Simple_repeat	1	101	(0)	2894653
28	25.2	0.0	0.0	chr4	73258339	73258406	(116956149)	+	(GCC)n	Simple_repeat	1	68	(0)	2894654
14	30.4	0.0	0.0	chr4	73258378	73258420	(116956135)	+	(GCT)n	Simple_repeat	1	43	(0)	2894655
29	32.6	0.8	1.6	chr4	73258540	73258660	(116955895)	+	(GCC)n	Simple_repeat	1	122	(0)	2894656
27	20.4	1.6	0.0	chr4	73258763	73258824	(116955731)	+	(GCC)n	Simple_repeat	1	63	(0)	2894657
23	25.4	1.4	1.4	chr4	73258825	73258834	(116955721)	+	(GCCACC)n	Simple_repeat	1	73	(0)	2894658
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
350	31.6	7.9	2.6	chr4	75512547	75512894	(114701661)	+	L2-3_Crp	LINE/L2	559	926	(1170)	2897551
16	5.2	0.0	0.0	chr4	75512903	75512922	(114701633)	+	(G)n	Simple_repeat	1	20	(0)	2897552
185	22.5	0.0	0.0	chr4	76148830	76148869	(114065686)	C	L2c	LINE/L2	(245)	3142	3103	2898786
471	23.3	13.0	0.0	chr4	76148941	76149060	(114065495)	C	MIR	SINE/MIR	(22)	240	103	2898787
443	32.5	3.4	5.7	chr4	76149137	76149348	(114065207)	C	MIR	SINE/MIR	(54)	208	2	2898788
25	22.1	6.3	4.4	chr4	76949773	76949899	(113264656)	+	(AGCCGG)n	Simple_repeat	1	135	(0)	2900137
443	18.6	2.0	11.0	chr4	77861634	77861742	(112352813)	C	L2c	LINE/L2	(0)	3387	3289	2901319
613	16.3	7.5	0.0	chr4	77861747	77861869	(112352686)	+	L1MB7	LINE/L1	6042	6174	(10)	2901320
47	0.0	2.3	0.0	chr4	77861982	77862025	(112352530)	+	(GT)n	Simple_repeat	1	45	(0)	2901321
6046	13.4	4.8	1.6	chr4	78671673	78671850	(111542705)	+	ERV24_Prim-int	LTR/ERV1	7404	7574	(1)	2902526
2826	13.6	5.6	3.1	chr4	78671851	78672305	(111542250)	+	LTR24	LTR/ERV1	1	467	(0)	2902526
15	5.5	0.0	0.0	chr4	78776041	78776059	(111438496)	+	(C)n	Simple_repeat	1	19	(0)	2902732
12	19.1	3.8	5.5	chr4	78776078	78776130	(111438425)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	2902733
15	32.9	0.0	0.0	chr4	79211506	79211554	(111003001)	+	(TA)n	Simple_repeat	1	49	(0)	2903329
429	28.7	6.2	1.6	chr4	79212109	79212292	(111002263)	C	Tigger15a	DNA/TcMar-Tigger	(108)	607	415	2903330
1923	21.1	2.6	5.3	chr4	80007446	80007956	(110206599)	+	MLT1D	LTR/ERVL-MaLR	9	505	(0)	2904264
21228	14.4	1.6	1.5	chr4	80115366	80120925	(110093630)	+	L1PA11	LINE/L1	420	6766	(815)	2904419
17	22.6	0.0	0.0	chr4	82462624	82462659	(107751896)	+	(C)n	Simple_repeat	1	36	(0)	2907661
2219	11.6	0.0	0.0	chr4	83495170	83495461	(106719094)	+	AluSz	SINE/Alu	1	292	(20)	2909644
2098	11.2	3.7	9.9	chr4	83495529	83495581	(106718974)	C	L1MA5A	LINE/L1	(0)	6297	6245	2909645
2329	8.4	0.3	1.4	chr4	83495582	83495877	(106718678)	C	AluYk2	SINE/Alu	(18)	293	1	2909646
2098	11.2	3.7	9.9	chr4	83495878	83495984	(106718571)	C	L1MA5A	LINE/L1	(53)	6244	6159	2909645
1680	15.9	0.9	0.9	chr4	85579723	85580039	(104634516)	C	L1MB8	LINE/L1	(290)	5888	5572	2912710
16	8.5	4.0	0.0	chr4	85580113	85580137	(104634418)	+	(TG)n	Simple_repeat	1	26	(0)	2912711
22	0.0	0.0	0.0	chr4	85580140	85580177	(104634378)	+	(GA)n	Simple_repeat	1	38	(0)	2912712
371	32.2	8.9	2.7	chr4	85580502	85580689	(104633866)	C	LTR78B	LTR/ERV1	(733)	563	363	2912713
545	25.8	11.8	0.8	chr4	86934398	86934624	(103279931)	+	MIRc	SINE/MIR	15	264	(4)	2914646
1796	19.0	0.0	0.7	chr4	87391536	87391830	(102822725)	+	AluJo	SINE/Alu	2	294	(18)	2915433
18	0.0	0.0	0.0	chr4	98929300	98929319	(91285236)	+	(T)n	Simple_repeat	1	20	(0)	2930946
29	19.8	1.9	4.4	chr4	98995507	98995586	(91218969)	+	G-rich	Low_complexity	1	78	(0)	2931108
13	23.0	2.4	0.0	chr4	99894183	99894223	(90320332)	+	(CACCC)n	Simple_repeat	1	42	(0)	2932297
15	17.5	4.6	5.9	chr4	101346054	101346118	(88868437)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	2934244
21	9.4	0.0	0.0	chr4	101346184	101346217	(88868338)	+	(AGGGGG)n	Simple_repeat	1	34	(0)	2934245
13	27.8	3.1	3.0	chr4	101346414	101346477	(88868078)	+	(CAC)n	Simple_repeat	1	66	(0)	2934246
18	8.5	0.0	0.0	chr4	102502333	102502357	(87712198)	+	(CT)n	Simple_repeat	1	25	(0)	2935762
43	0.0	0.0	0.0	chr4	102502391	102502427	(87712128)	+	(CA)n	Simple_repeat	1	37	(0)	2935763
31	17.6	3.3	5.3	chr4	105147970	105148053	(85066502)	+	(TC)n	Simple_repeat	1	83	(0)	2939091
30	3.5	0.0	0.0	chr4	105148054	105148083	(85066472)	+	(AC)n	Simple_repeat	1	30	(0)	2939092
2609	20.7	1.0	0.2	chr4	109174231	109174744	(81039811)	+	LTR53	LTR/ERVL	2	519	(0)	2944560
3784	18.2	4.7	4.0	chr4	109452902	109453875	(80760680)	C	MER11C	LTR/ERVK	(0)	1071	2	2944986
36	20.4	1.8	4.5	chr4	109730096	109730205	(80484350)	+	G-rich	Low_complexity	1	112	(0)	2945437
235	31.4	1.9	2.9	chr4	109730264	109730368	(80484187)	C	MER5B	DNA/hAT-Charlie	(39)	139	36	2945438
27	3.5	0.0	0.0	chr4	110199042	110199071	(80015484)	+	(CCACCC)n	Simple_repeat	1	30	(0)	2946149
44	8.1	3.0	0.0	chr4	112144772	112144838	(78069717)	+	(TC)n	Simple_repeat	1	69	(0)	2948771
1556	12.4	6.0	0.0	chr4	112144839	112145072	(78069483)	C	AluJb	SINE/Alu	(30)	282	34	2948772
1220	19.2	14.4	0.0	chr4	118277837	118278158	(71936397)	C	L1MC3	LINE/L1	(0)	7785	7410	2956657
1885	11.3	0.0	0.0	chr4	118278166	118278404	(71936151)	C	AluSz	SINE/Alu	(73)	239	1	2956658
1055	7.2	2.2	2.9	chr4	119454019	119454157	(70760398)	C	AluJo	SINE/Alu	(152)	160	23	2958492
398	25.9	8.6	1.0	chr4	119454218	119454433	(70760122)	C	FRAM	SINE/Alu	(6)	296	46	2958493
28	11.8	0.0	0.0	chr4	119628600	119628645	(70585910)	+	(CTG)n	Simple_repeat	1	46	(0)	2958741
20	12.0	0.0	2.6	chr4	119628968	119629005	(70585550)	+	(GGC)n	Simple_repeat	1	38	(0)	2958742
1977	8.4	1.5	1.1	chr4	121695663	121695924	(68518631)	+	AluSx1	SINE/Alu	43	305	(7)	2961411
61	0.0	1.7	1.6	chr4	128553015	128553074	(61661481)	+	(CT)n	Simple_repeat	1	61	(0)	2970885
16	5.3	0.0	0.0	chr4	128553281	128553300	(61661255)	+	(AC)n	Simple_repeat	1	20	(0)	2970886
22	0.0	0.0	0.0	chr4	128810451	128810474	(61404081)	+	(T)n	Simple_repeat	1	24	(0)	2971408
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	18.8	0.0	8.0	chr4	128812373	128812422	(61402133)	+	(CGGCGCG)n	Simple_repeat	1	50	(0)	2971410
13	17.8	5.3	0.0	chr4	139177126	139177163	(51037392)	+	(CCGCC)n	Simple_repeat	1	40	(0)	2984094
15	17.7	3.5	6.7	chr4	139177227	139177304	(51037251)	+	(CCT)n	Simple_repeat	1	75	(0)	2984095
12	7.9	7.4	0.0	chr4	140151677	140151703	(50062852)	+	G-rich	Low_complexity	1	29	(0)	2985798
12	23.4	0.0	4.5	chr4	140151741	140151784	(50062771)	+	A-rich	Low_complexity	1	44	(0)	2985799
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
2352	12.5	5.1	0.0	chr4	143242016	143242352	(46972203)	+	LTR18A	LTR/ERVL	3	357	(0)	2989996
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
17	24.1	1.4	5.6	chr4	145180057	145180127	(45034428)	+	(GGCGGC)n	Simple_repeat	1	72	(0)	2992522
12	26.6	4.5	2.9	chr4	148445298	148445363	(41769192)	+	(CCTCG)n	Simple_repeat	1	69	(0)	2997129
19	25.8	4.5	1.4	chr4	148445549	148445615	(41768940)	+	(CG)n	Simple_repeat	1	70	(0)	2997130
16	22.0	1.8	3.5	chr4	148445644	148445699	(41768856)	+	G-rich	Low_complexity	1	57	(0)	2997131
12	19.5	0.0	8.3	chr4	151015367	151015414	(39199141)	+	G-rich	Low_complexity	1	48	(0)	3000636
36	6.7	0.0	0.0	chr4	152535804	152535850	(37678705)	+	(CCGGCT)n	Simple_repeat	1	47	(0)	3003139
27	6.1	0.0	0.0	chr4	152535997	152536031	(37678524)	+	(CAGCGG)n	Simple_repeat	1	35	(0)	3003140
404	27.0	8.0	12.2	chr4	159455395	159455662	(30758893)	+	L1ME3Cz	LINE/L1	5938	6199	(43)	3012934
2132	23.3	2.3	3.5	chr4	163194476	163195098	(27019457)	C	HUERS-P3-int	LTR/ERV1	(8302)	617	3	3017697
4364	15.1	3.2	1.8	chr4	163195102	163195866	(27018689)	C	LTR19C	LTR/ERV1	(0)	779	4	3017697
3473	17.3	7.2	10.1	chr4	169625842	169626695	(20587860)	C	MER21A	LTR/ERVL	(39)	892	65	3026589
48	4.1	0.0	0.0	chr4	172871596	172871645	(17342910)	+	(GT)n	Simple_repeat	1	50	(0)	3030859
30	0.0	5.7	0.0	chr4	172871756	172871790	(17342765)	+	(GTTT)n	Simple_repeat	1	37	(0)	3030860
2130	10.4	0.3	3.4	chr4	172871794	172872091	(17342464)	C	AluSx	SINE/Alu	(22)	290	2	3030861
757	26.7	16.6	6.6	chr4	172998921	172999538	(17215017)	C	LTR41C	LTR/ERVL	(0)	701	10	3030998
208	32.6	14.8	0.0	chr4	172999583	172999680	(17214875)	+	L2	LINE/L2	2338	2452	(967)	3030997
19	8.6	0.0	7.0	chr4	173013542	173013584	(17200971)	+	(CCCCCCA)n	Simple_repeat	1	43	(0)	3031020
14	23.7	6.6	4.1	chr4	173169215	173169305	(17045250)	+	(CGCGGC)n	Simple_repeat	1	97	(0)	3031239
12	7.5	6.7	3.1	chr4	173169705	173169734	(17044821)	+	(CCCG)n	Simple_repeat	1	32	(0)	3031240
13	21.7	0.0	2.6	chr4	173169735	173169742	(17044813)	+	(CCCCAGC)n	Simple_repeat	2	39	(0)	3031241
416	30.3	5.8	1.7	chr4	173258582	173258762	(16955793)	C	MIR	SINE/MIR	(29)	233	45	3031362
408	31.2	10.2	7.5	chr4	182975236	182975569	(7238986)	+	L1MEd	LINE/L1	554	890	(5510)	3044183
592	19.5	2.0	2.5	chr4	182975569	182975585	(7238970)	+	L1MEd	LINE/L1	3245	3259	(3060)	3044183
2425	20.5	2.2	5.6	chr4	182975586	182976154	(7238401)	C	MER44B	DNA/TcMar-Tigger	(1)	549	1	3044185
592	19.5	2.0	2.5	chr4	182976155	182976336	(7238219)	+	L1MEd	LINE/L1	3260	3443	(2876)	3044183
2944	25.6	8.4	2.4	chr4	183348376	183348835	(6865720)	+	Arthur1	DNA/hAT-Tip100	1	507	(3440)	3044782
4144	13.2	2.0	0.0	chr4	183348836	183349456	(6865099)	+	MER41B	LTR/ERV1	1	634	(0)	3044783
667	21.5	7.6	3.5	chr4	183395513	183395782	(6818773)	C	MER102c	DNA/hAT-Charlie	(32)	299	33	3044863
2174	10.6	3.5	0.7	chr4	183395860	183396162	(6818393)	C	AluSx1	SINE/Alu	(0)	312	1	3044864
17	20.0	7.0	0.0	chr4	183504710	183504766	(6709789)	+	(CGCAGG)n	Simple_repeat	1	61	(0)	3045073
1422	17.0	21.4	4.2	chr4	184267430	184267785	(5946770)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	1	3046282
12	18.4	9.6	0.0	chr4	184267786	184267797	(5946758)	+	(ATGCAC)n	Simple_repeat	3	14	(0)	3046283
365	31.1	10.0	1.5	chr4	184268065	184268394	(5946161)	+	L1M6	LINE/L1	1136	1496	(5000)	3046277
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
59	0.0	0.0	0.0	chr4	185023030	185023079	(5191476)	+	(TC)n	Simple_repeat	1	50	(0)	3047549
18	10.8	3.3	0.0	chr4	185023089	185023118	(5191437)	+	(TG)n	Simple_repeat	1	31	(0)	3047550
200	19.0	0.0	13.4	chr5	273806	273872	(181264387)	C	UCON80_AMi	Unknown	(68)	154	97	3055238
2089	9.6	1.7	0.7	chr5	556368	556660	(180981599)	C	AluY	SINE/Alu	(15)	296	1	3055510
1623	25.5	14.3	3.3	chr5	919770	921077	(180617182)	C	L1MEc	LINE/L1	(1868)	4451	2139	3055798
2487	23.1	8.7	2.1	chr5	996795	997467	(180540792)	+	MER72	LTR/ERV1	1	722	(0)	3055886
438	40.0	4.5	3.4	chr5	997468	997531	(180540728)	+	L1ME4a	LINE/L1	5848	5909	(215)	3055885
258	21.4	5.1	10.4	chr5	997537	997661	(180540598)	+	L1ME4a	LINE/L1	6005	6122	(2)	3055885
17	12.7	0.0	0.0	chr5	1556785	1556810	(179981449)	+	(G)n	Simple_repeat	1	26	(0)	3056358
453	30.5	6.2	5.1	chr5	10158553	10158825	(171379434)	C	MER20B	DNA/hAT-Charlie	(81)	702	427	3066421
442	25.9	33.0	2.1	chr5	10158854	10159096	(171379163)	C	MER20B	DNA/hAT-Charlie	(436)	347	28	3066421
1717	7.1	0.4	0.0	chr5	10159301	10159526	(171378733)	+	L1PA8	LINE/L1	5944	6170	(2)	3066424
1819	11.0	5.6	2.1	chr5	10248992	10249282	(171288977)	+	AluSz6	SINE/Alu	2	303	(9)	3066551
189	20.0	3.9	0.0	chr5	10249315	10249364	(171288895)	+	MIR	SINE/MIR	67	118	(144)	3066552
510	25.3	3.1	3.6	chr5	10249377	10249590	(171288669)	C	MIR	SINE/MIR	(32)	236	18	3066553
21	16.7	2.1	0.0	chr5	10354121	10354167	(171184092)	+	G-rich	Low_complexity	1	48	(0)	3066756
585	30.7	6.6	5.1	chr5	10513702	10514075	(171024184)	+	MER68B	LTR/ERVL	155	534	(30)	3067040
13	19.4	0.0	2.7	chr5	10514140	10514176	(171024083)	+	(CCCTTCC)n	Simple_repeat	1	37	(0)	3067041
19	0.0	0.0	0.0	chr5	10528490	10528510	(171009749)	+	(A)n	Simple_repeat	1	21	(0)	3067074
1043	12.5	0.6	1.8	chr5	10528679	10528849	(171009410)	+	MLT1C	LTR/ERVL-MaLR	4	172	(295)	3067075
6290	8.4	1.0	1.3	chr5	10528867	10529544	(171008715)	C	L1PA10	LINE/L1	(5)	6163	5492	3067076
337	25.5	1.1	1.1	chr5	10701714	10701808	(170836451)	+	MER94	DNA/hAT-Blackjack	1	95	(39)	3067345
1872	13.3	4.0	6.9	chr5	34686255	34686643	(146851616)	+	L1MA8	LINE/L1	5913	6289	(2)	3100228
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
15	12.6	0.0	0.0	chr5	36876989	36877015	(144661244)	+	(GGA)n	Simple_repeat	1	27	(0)	3103487
19	4.0	0.0	0.0	chr5	36877200	36877225	(144661034)	+	(CGG)n	Simple_repeat	1	26	(0)	3103488
618	24.7	4.8	2.2	chr5	38379413	38379697	(143158562)	C	LTR48B	LTR/ERV1	(422)	365	1	3106038
16	16.8	0.0	0.0	chr5	38379823	38379850	(143158409)	+	A-rich	Low_complexity	1	28	(0)	3106039
1125	18.7	19.0	0.0	chr5	38379928	38380200	(143158059)	C	MER58B	DNA/hAT-Charlie	(4)	337	1	3106040
80	0.0	0.0	0.0	chr5	39075285	39075352	(142462907)	+	(AC)n	Simple_repeat	1	68	(0)	3107043
339	37.4	3.7	3.0	chr5	39075437	39075571	(142462688)	+	L2b	LINE/L2	3240	3375	(0)	3107044
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
808	21.1	7.0	6.1	chr5	40756521	40756732	(140781527)	C	MER20	DNA/hAT-Charlie	(5)	214	1	3109366
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
3444	19.3	5.7	3.0	chr5	42581660	42583145	(138955114)	+	MER52A	LTR/ERV1	1	1755	(0)	3111787
457	30.4	2.6	5.5	chr5	42876874	42877075	(138661184)	+	MIRb	SINE/MIR	72	267	(1)	3112189
1549	15.7	6.2	3.9	chr5	42908845	42909175	(138629084)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3112242
328	18.5	0.0	1.5	chr5	42909331	42909395	(138628864)	+	FRAM	SINE/Alu	97	160	(16)	3112243
1471	19.4	3.7	0.0	chr5	43038562	43038844	(138499415)	C	AluJb	SINE/Alu	(18)	294	1	3112448
2146	7.4	0.0	1.5	chr5	43105009	43105277	(138432982)	+	AluSg	SINE/Alu	24	288	(22)	3112545
20	21.8	1.9	0.0	chr5	43556761	43556813	(137981446)	+	(CCGGCC)n	Simple_repeat	1	54	(0)	3113263
18	4.1	0.0	0.0	chr5	43556848	43556872	(137981387)	+	(CTC)n	Simple_repeat	1	25	(0)	3113264
12	8.8	4.2	0.0	chr5	43772559	43772582	(137765677)	+	(ACAA)n	Simple_repeat	1	25	(0)	3113551
2241	10.6	0.0	1.0	chr5	55575130	55575431	(125962828)	+	AluSz	SINE/Alu	1	299	(13)	3123490
885	23.0	4.6	6.1	chr5	55575440	55575703	(125962556)	+	L1MD2	LINE/L1	5997	6256	(103)	3123491
1446	15.7	11.8	2.7	chr5	55575829	55576089	(125962170)	C	AluJb	SINE/Alu	(22)	290	3	3123492
17	12.8	2.9	0.0	chr5	55995820	55995853	(125542406)	+	(GTGC)n	Simple_repeat	1	35	(0)	3124230
12	17.6	4.0	5.8	chr5	56951820	56951869	(124586390)	+	(GCCG)n	Simple_repeat	1	52	(0)	3125802
46	0.0	1.9	3.8	chr5	57442128	57442179	(124096080)	+	(TG)n	Simple_repeat	1	53	(0)	3126780
414	32.1	10.7	5.5	chr5	60943961	60944412	(120593847)	+	L2	LINE/L2	2365	2842	(577)	3131565
277	19.8	2.4	11.0	chr5	60944503	60944593	(120593666)	+	L2a	LINE/L2	3343	3425	(1)	3131566
17	27.6	0.0	0.0	chr5	60944706	60944754	(120593505)	+	(CCC)n	Simple_repeat	1	49	(0)	3131567
47	2.2	0.0	0.0	chr5	61332777	61332823	(120205436)	+	(GCC)n	Simple_repeat	1	47	(0)	3132108
12	9.7	0.0	0.0	chr5	61332972	61332993	(120205266)	+	(CCGT)n	Simple_repeat	1	22	(0)	3132109
15	17.8	2.6	0.0	chr5	61333331	61333368	(120204891)	+	(GGCGG)n	Simple_repeat	1	39	(0)	3132110
14	14.3	0.0	3.0	chr5	62306950	62306982	(119231277)	+	G-rich	Low_complexity	1	33	(0)	3133537
14	23.8	1.2	1.2	chr5	65078147	65078194	(116460065)	+	A-rich	Low_complexity	1	47	(0)	3137330
13	15.4	5.6	0.0	chr5	68215681	68215716	(113322543)	+	G-rich	Low_complexity	1	38	(0)	3141939
29	0.0	0.0	0.0	chr5	68217630	68217654	(113320605)	+	(GT)n	Simple_repeat	1	25	(0)	3141940
272	17.4	5.5	12.2	chr5	68244493	68244590	(113293669)	+	LTR9A1	LTR/ERV1	555	645	(83)	3141968
16	9.8	0.0	0.0	chr5	69369224	69369245	(112169014)	+	(C)n	Simple_repeat	1	22	(0)	3143884
2855	16.8	9.4	5.0	chr5	71586451	71587046	(109951213)	C	MER51A	LTR/ERV1	(9)	625	1	3147717
2333	9.3	0.0	0.0	chr5	72078940	72079229	(109459030)	C	AluSg	SINE/Alu	(0)	310	21	3148459
1940	23.0	8.8	1.0	chr5	72954068	72954567	(108583692)	C	Zaphod	DNA/hAT-Tip100	(3482)	549	7	3149766
352	21.0	16.9	9.2	chr5	72954833	72954984	(108583275)	C	L1MC5	LINE/L1	(103)	9201	9036	3149767
20	9.8	2.0	6.0	chr5	73498823	73498871	(108039388)	+	(GGCCA)n	Simple_repeat	1	50	(0)	3150587
1415	17.1	3.7	7.4	chr5	74919910	74920218	(106618041)	+	AluJo	SINE/Alu	1	297	(15)	3152744
12	0.0	8.0	3.7	chr5	75511355	75511379	(106026880)	+	(CCG)n	Simple_repeat	1	27	(0)	3153647
13	8.8	0.0	3.9	chr5	75511436	75511461	(106026798)	+	(GCC)n	Simple_repeat	1	26	(0)	3153648
12	19.5	2.6	2.6	chr5	75511521	75511558	(106026701)	+	A-rich	Low_complexity	1	39	(0)	3153649
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
3815	15.6	9.9	0.0	chr5	76363645	76364293	(105173966)	+	MER72	LTR/ERV1	3	722	(0)	3154887
1893	16.4	0.0	1.3	chr5	76724061	76724370	(104813889)	C	AluJo	SINE/Alu	(6)	306	1	3155467
1881	18.3	7.6	9.1	chr5	76724371	76724654	(104813605)	C	L1MC5a	LINE/L1	(284)	2493	2213	3155466
1082	19.4	10.0	4.7	chr5	76724634	76724887	(104813372)	C	L1MC5a	LINE/L1	(1089)	1688	1420	3155466
233	35.3	9.3	0.8	chr5	78483495	78483731	(103054528)	+	L2	LINE/L2	2452	2710	(709)	3158184
31	21.7	0.0	0.0	chr5	79612336	79612399	(101925860)	+	G-rich	Low_complexity	1	64	(0)	3160094
317	28.1	1.9	1.0	chr5	79810919	79811022	(101727237)	C	LTR78	LTR/ERV1	(0)	1304	1200	3160400
195	28.2	10.5	2.3	chr5	79811072	79811158	(101727101)	C	L2c	LINE/L2	(239)	3148	3054	3160397
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
12	8.6	0.0	6.9	chr5	81852164	81852192	(99686067)	+	(AACA)n	Simple_repeat	1	29	(0)	3163718
47	2.3	0.0	0.0	chr5	81853652	81853696	(99684563)	+	(CA)n	Simple_repeat	1	45	(0)	3163721
684	20.8	14.8	6.7	chr5	81945572	81945704	(99592555)	C	L1M4	LINE/L1	(1009)	5137	5012	3163892
506	30.2	0.8	0.0	chr5	81945705	81945820	(99592439)	C	MLT1G3	LTR/ERVL-MaLR	(275)	320	204	3163895
2776	21.5	4.9	9.0	chr5	81945823	81946190	(99592069)	C	LTR8	LTR/ERV1	(0)	691	310	3163896
2164	13.2	11.2	5.5	chr5	81946191	81946444	(99591815)	+	MSTA	LTR/ERVL-MaLR	1	279	(149)	3163897
17	28.8	1.6	1.6	chr5	87267811	87267873	(94270386)	+	(CTCC)n	Simple_repeat	1	64	(0)	3170894
11	32.9	0.0	0.0	chr5	87267989	87268037	(94270222)	+	(GCAGCG)n	Simple_repeat	1	49	(0)	3170895
12	14.4	6.2	0.0	chr5	87268414	87268445	(94269814)	+	G-rich	Low_complexity	1	34	(0)	3170896
30	9.2	0.0	0.0	chr5	88141725	88141771	(93396488)	+	(CCCCCG)n	Simple_repeat	1	47	(0)	3171929
49	0.0	0.0	0.0	chr5	88142197	88142238	(93396021)	+	(CA)n	Simple_repeat	1	42	(0)	3171930
19	10.1	0.0	0.0	chr5	88142458	88142495	(93395764)	+	(ACAC)n	Simple_repeat	1	38	(0)	3171931
19	13.0	2.9	0.0	chr5	88142669	88142702	(93395557)	+	(AC)n	Simple_repeat	1	35	(0)	3171932
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
248	31.3	10.4	3.0	chr5	90410217	90410384	(91127875)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	3174712
22	2.8	2.4	7.0	chr5	91380210	91380251	(90158008)	+	(CCG)n	Simple_repeat	1	43	(0)	3176168
16	19.2	2.0	3.9	chr5	95731312	95731372	(85806887)	+	(GCAGCG)n	Simple_repeat	1	59	(0)	3181581
17	31.4	1.4	1.4	chr5	95961739	95961810	(85576449)	+	(GCC)n	Simple_repeat	1	73	(0)	3181912
17	16.2	0.0	4.4	chr5	95961875	95961919	(85576340)	+	(CCGCCC)n	Simple_repeat	1	45	(0)	3181913
427	30.3	8.4	6.2	chr5	97182183	97182655	(84355604)	+	L2b	LINE/L2	2814	3289	(98)	3183679
30	31.9	0.0	5.2	chr5	98928804	98928956	(82609303)	+	(CGC)n	Simple_repeat	1	153	(0)	3185759
18	12.0	0.0	0.0	chr5	103562811	103562837	(77975422)	+	(G)n	Simple_repeat	1	27	(0)	3191611
15	16.9	0.0	0.0	chr5	108381811	108381837	(73156422)	+	(CA)n	Simple_repeat	1	27	(0)	3197553
12	9.8	0.0	0.0	chr5	108381945	108381966	(73156293)	+	(GCGA)n	Simple_repeat	1	22	(0)	3197554
16	0.0	0.0	0.0	chr5	109409818	109409834	(72128425)	+	(A)n	Simple_repeat	1	17	(0)	3198946
13	29.5	0.0	2.0	chr5	109409882	109409932	(72128327)	+	(CCT)n	Simple_repeat	1	51	(0)	3198947
28	7.5	0.0	2.3	chr5	109409942	109409985	(72128274)	+	(GCG)n	Simple_repeat	1	44	(0)	3198948
1656	23.3	5.3	4.5	chr5	109688258	109688897	(71849362)	C	LTR41	LTR/ERVL	(47)	721	3	3199329
17	15.5	0.0	0.0	chr5	112879326	112879354	(68658905)	+	G-rich	Low_complexity	1	29	(0)	3203441
551	17.4	1.7	10.2	chr5	112879358	112879465	(68658794)	C	MER2B	DNA/TcMar-Tigger	(22)	314	217	3203442
2566	8.7	0.0	1.0	chr5	112879466	112879775	(68658484)	C	AluY	SINE/Alu	(4)	307	1	3203443
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
282	27.6	4.9	6.5	chr5	115461943	115462066	(66076193)	C	MIRc	SINE/MIR	(45)	223	102	3206826
302	29.5	8.6	6.9	chr5	115462079	115462398	(66075861)	+	HAL1	LINE/L1	91	416	(2091)	3206827
749	28.1	13.3	11.1	chr5	119321225	119322329	(62215930)	+	L2a	LINE/L2	2224	3425	(1)	3212167
884	32.9	13.5	2.0	chr5	119322627	119323323	(62214936)	+	L2b	LINE/L2	2137	2926	(493)	3212169
254	27.1	11.4	0.0	chr5	119323416	119323485	(62214774)	+	L2b	LINE/L2	3292	3370	(5)	3212169
1676	25.8	7.8	2.9	chr5	122862972	122863516	(58674743)	C	L2a	LINE/L2	(0)	3426	2885	3216571
1727	17.5	0.3	9.8	chr5	122863517	122863854	(58674405)	C	AluJb	SINE/Alu	(6)	306	1	3216572
2686	18.1	3.3	4.5	chr5	122924072	122924627	(58613632)	C	MER44B	DNA/TcMar-Tigger	(0)	550	2	3216679
782	29.8	3.6	2.5	chr5	122924652	122924895	(58613364)	C	MIRb	SINE/MIR	(19)	249	3	3216680
2284	6.6	1.4	0.3	chr5	126779617	126779750	(54758509)	+	AluSx1	SINE/Alu	1	135	(177)	3221963
2405	7.8	0.3	0.0	chr5	126779751	126780045	(54758214)	+	AluSc8	SINE/Alu	1	296	(15)	3221964
2284	6.6	1.4	0.3	chr5	126780046	126780200	(54758059)	+	AluSx1	SINE/Alu	137	292	(20)	3221963
519	19.0	5.5	4.6	chr5	126780365	126780538	(54757721)	C	Kanga1c	DNA/TcMar-Tc2	(606)	173	4	3221965
1484	14.0	9.9	1.3	chr5	126947408	126947719	(54590540)	+	L1MC1	LINE/L1	5992	6333	(0)	3222211
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
917	19.7	1.8	4.0	chr5	129093519	129093740	(52444519)	+	MER20	DNA/hAT-Charlie	3	219	(0)	3224934
14	27.8	1.4	4.2	chr5	131264260	131264329	(50273930)	+	G-rich	Low_complexity	1	71	(0)	3227656
400	25.3	7.8	3.1	chr5	132181416	132181542	(49356717)	C	L2a	LINE/L2	(44)	3382	3247	3229001
2184	17.9	10.1	0.5	chr5	132181543	132181981	(49356278)	C	MER66B	LTR/ERV1	(0)	486	1	3229002
31	0.0	0.0	0.0	chr5	132279362	132279388	(49258871)	+	(CA)n	Simple_repeat	1	27	(0)	3229134
496	22.2	10.0	4.5	chr5	132279517	132279695	(49258564)	C	MIR	SINE/MIR	(1)	261	72	3229135
251	24.8	1.8	0.6	chr5	132419489	132419564	(49118695)	+	MIR	SINE/MIR	158	237	(31)	3229337
421	23.5	3.8	3.8	chr5	132457978	132458083	(49080176)	C	MER5B	DNA/hAT-Charlie	(0)	178	73	3229406
370	24.0	3.7	0.9	chr5	132496496	132496600	(49041659)	+	MIR	SINE/MIR	49	156	(106)	3229454
554	22.9	9.8	5.4	chr5	132500581	132500746	(49037513)	C	MER96	DNA/hAT-Tip100	(0)	175	2	3229458
2208	22.9	12.2	10.0	chr5	132788224	132788503	(48749756)	+	LTR102_Mam	LTR/ERVL	579	851	(0)	3229914
240	11.1	11.5	0.0	chr5	132788539	132788592	(48749667)	C	MLT1L	LTR/ERVL-MaLR	(528)	82	22	3229917
325	31.1	6.4	0.0	chr5	132788833	132788964	(48749295)	C	L2c	LINE/L2	(2)	3385	3245	3229918
11	25.6	0.0	2.5	chr5	132830657	132830696	(48707563)	+	(GGCTCC)n	Simple_repeat	1	40	(0)	3229982
17	13.1	0.0	0.0	chr5	132962795	132962820	(48575439)	+	(T)n	Simple_repeat	1	26	(0)	3230228
2146	11.2	0.3	0.3	chr5	132964212	132964515	(48573744)	C	AluSz	SINE/Alu	(8)	304	1	3230231
1575	20.5	21.1	3.9	chr5	133033042	133033524	(48504735)	C	MER92C	LTR/ERV1	(0)	590	3	3230421
2569	8.0	0.0	0.3	chr5	133033789	133034102	(48504157)	C	AluSp	SINE/Alu	(0)	313	1	3230422
38	9.7	0.0	0.0	chr5	133106483	133106537	(48431722)	+	(GT)n	Simple_repeat	1	55	(0)	3230569
2373	6.9	0.3	0.0	chr5	134102387	134102691	(47435568)	+	AluSp	SINE/Alu	1	306	(7)	3231947
204	27.4	33.2	3.8	chr5	134177528	134177671	(47360588)	C	MIRb	SINE/MIR	(81)	187	1	3232044
35	0.0	0.0	0.0	chr5	134371474	134371505	(47166754)	+	(CGG)n	Simple_repeat	1	32	(0)	3232422
607	23.6	4.9	6.8	chr5	134465576	134465805	(47072454)	+	MIRb	SINE/MIR	30	268	(0)	3232623
283	23.8	9.0	2.9	chr5	134466208	134466311	(47071948)	+	MamTip2	DNA/hAT-Tip100	108	218	(87)	3232624
18	19.8	2.2	0.0	chr5	134526091	134526136	(47012123)	+	(CTCT)n	Simple_repeat	1	47	(0)	3232769
12	14.3	4.8	4.5	chr5	135034096	135034137	(46504122)	+	(GCTCAGC)n	Simple_repeat	1	44	(0)	3233795
28	3.3	0.0	0.0	chr5	135034145	135034175	(46504084)	+	(CCGGCT)n	Simple_repeat	1	31	(0)	3233796
17	21.6	0.0	3.1	chr5	135034273	135034345	(46503914)	+	G-rich	Low_complexity	1	70	(0)	3233797
32	25.7	0.8	5.9	chr5	135034349	135034490	(46503769)	+	(CCCGC)n	Simple_repeat	1	134	(0)	3233798
13	26.1	0.0	0.0	chr5	135034704	135034744	(46503515)	+	G-rich	Low_complexity	1	41	(0)	3233799
278	35.0	5.7	0.5	chr5	135134317	135134500	(46403759)	+	L3	LINE/CR1	3754	3947	(152)	3233930
18	17.6	0.0	0.0	chr5	136134038	136134069	(45404190)	+	G-rich	Low_complexity	1	32	(0)	3235279
18	20.1	0.0	0.0	chr5	137753219	137753258	(43785001)	+	(CCG)n	Simple_repeat	1	40	(0)	3237461
2498	4.4	2.0	0.3	chr5	138576175	138576467	(42961792)	+	AluY	SINE/Alu	1	298	(13)	3239129
757	28.2	5.1	4.4	chr5	138714291	138714438	(42823821)	C	L2a	LINE/L2	(660)	2759	2608	3239421
1978	16.0	0.0	2.6	chr5	138714439	138714750	(42823509)	C	AluJb	SINE/Alu	(7)	305	2	3239433
757	28.2	5.1	4.4	chr5	138714751	138714872	(42823387)	C	L2a	LINE/L2	(812)	2607	2487	3239421
299	24.1	1.2	3.5	chr5	138714912	138714997	(42823262)	+	MamGypLTR1a	LTR/Gypsy	177	260	(524)	3239434
15	0.0	5.3	0.0	chr5	139294474	139294492	(42243767)	+	(CG)n	Simple_repeat	1	20	(0)	3240506
21	18.5	0.0	0.0	chr5	139561527	139561569	(41976690)	+	(GGC)n	Simple_repeat	1	43	(0)	3241047
16	21.6	3.6	1.8	chr5	139637422	139637476	(41900783)	+	(CCCCG)n	Simple_repeat	1	57	(0)	3241229
15	15.5	3.4	8.2	chr5	139648213	139648271	(41889988)	+	GA-rich	Low_complexity	1	61	(0)	3241240
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
14	8.2	0.0	3.6	chr5	139648486	139648513	(41889746)	+	(CCCAG)n	Simple_repeat	1	28	(0)	3241243
14	9.6	0.0	0.0	chr5	139648803	139648825	(41889434)	+	(GCG)n	Simple_repeat	1	23	(0)	3241244
13	33.9	1.5	0.0	chr5	139648864	139648892	(41889367)	+	(CCCTCC)n	Simple_repeat	1	66	(0)	3241245
13	12.1	8.3	0.0	chr5	139648893	139648928	(41889331)	+	(CCCCT)n	Simple_repeat	1	39	(0)	3241246
20	12.5	0.0	6.1	chr5	139670165	139670217	(41868042)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	3241282
48	0.0	0.0	0.0	chr5	139698356	139698396	(41839863)	+	(TG)n	Simple_repeat	1	41	(0)	3241324
16	23.8	7.2	0.0	chr5	139698541	139698609	(41839650)	+	(TCTGTG)n	Simple_repeat	1	74	(0)	3241325
12	10.8	6.7	0.0	chr5	139698867	139698896	(41839363)	+	(ATTTGC)n	Simple_repeat	1	32	(0)	3241326
409	31.2	11.0	3.6	chr5	139699198	139699390	(41838869)	C	MIRb	SINE/MIR	(31)	237	29	3241327
26	0.0	0.0	0.0	chr5	139711324	139711348	(41826911)	+	(GCC)n	Simple_repeat	1	25	(0)	3241351
13	22.1	2.3	2.2	chr5	139711430	139711473	(41826786)	+	G-rich	Low_complexity	1	45	(0)	3241352
185	10.0	3.2	0.0	chr5	139711799	139711828	(41826431)	+	MIR3	SINE/MIR	117	147	(61)	3241353
325	15.1	14.9	0.8	chr5	139755843	139755969	(41782290)	C	MER96B	DNA/hAT-Tip100	(32)	385	238	3241461
15	13.9	0.0	0.0	chr5	139788165	139788188	(41750071)	+	(C)n	Simple_repeat	1	24	(0)	3241524
432	31.3	6.8	0.0	chr5	139835387	139835536	(41702723)	C	L2a	LINE/L2	(0)	3426	3266	3241604
16	26.4	0.0	0.0	chr5	139835539	139835581	(41702678)	+	(CCAC)n	Simple_repeat	1	43	(0)	3241605
382	31.1	5.7	2.3	chr5	139835923	139836093	(41702166)	C	MamRep564	Unknown	(113)	244	68	3241606
14	27.4	0.0	1.9	chr5	140113737	140113752	(41424507)	+	(CAGCAG)n	Simple_repeat	1	15	(0)	3242043
29	0.0	0.0	0.0	chr5	140113753	140113779	(41424480)	+	(GGT)n	Simple_repeat	1	27	(0)	3242044
14	27.4	0.0	1.9	chr5	140113780	140113815	(41424444)	+	(CAGCAG)n	Simple_repeat	4	39	(0)	3242045
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
2343	10.6	0.3	0.6	chr5	140286130	140286441	(41251818)	+	AluSx1	SINE/Alu	2	312	(0)	3242308
23	3.7	0.0	0.0	chr5	140286598	140286625	(41251634)	+	(G)n	Simple_repeat	1	28	(0)	3242309
1829	14.1	1.1	1.4	chr5	140286626	140286908	(41251351)	C	AluSx1	SINE/Alu	(30)	282	1	3242310
1623	19.0	2.0	1.0	chr5	140432713	140433002	(41105257)	C	AluJr4	SINE/Alu	(18)	294	2	3242620
1883	14.7	2.1	0.0	chr5	140433080	140433364	(41104895)	C	AluSz6	SINE/Alu	(21)	291	1	3242621
308	32.7	6.6	1.3	chr5	140556770	140556927	(40981332)	C	L2b	LINE/L2	(971)	2448	2282	3242811
12	23.5	2.5	0.0	chr5	140565190	140565229	(40973030)	+	(CACTCA)n	Simple_repeat	1	41	(0)	3242826
211	31.6	6.7	0.5	chr5	140565471	140565548	(40972711)	C	L2c	LINE/L2	(29)	3358	3252	3242827
3742	5.8	2.4	4.6	chr5	140638023	140638543	(40899716)	C	LTR10D	LTR/ERV1	(2)	511	3	3242978
2353	8.1	2.6	0.7	chr5	140638550	140638856	(40899403)	C	AluSq2	SINE/Alu	(0)	313	1	3242979
1467	7.3	3.0	0.0	chr5	140638858	140639049	(40899210)	+	MER4B	LTR/ERV1	569	766	(0)	3242976
15	15.1	2.6	0.0	chr5	141683085	141683100	(39855159)	+	G-rich	Low_complexity	1	17	(0)	3244399
65	3.2	0.0	0.0	chr5	141683101	141683164	(39855095)	+	(GT)n	Simple_repeat	1	64	(0)	3244400
15	15.1	2.6	0.0	chr5	141683165	141683185	(39855074)	+	G-rich	Low_complexity	18	38	(0)	3244401
21	0.0	6.2	0.0	chr5	141850522	141850553	(39687706)	+	(GGGGTG)n	Simple_repeat	1	34	(0)	3244743
16	11.6	0.0	0.0	chr5	141850625	141850653	(39687606)	+	(GGGGT)n	Simple_repeat	1	29	(0)	3244744
15	29.0	3.2	0.0	chr5	141876360	141876422	(39661837)	+	(GCCGGC)n	Simple_repeat	1	65	(0)	3244777
17	28.5	0.0	0.0	chr5	141878302	141878356	(39659903)	+	(GGCTGG)n	Simple_repeat	1	55	(0)	3244779
45	0.0	0.0	0.0	chr5	141878413	141878453	(39659806)	+	(GGC)n	Simple_repeat	1	41	(0)	3244780
23	16.2	4.5	2.9	chr5	141878478	141878543	(39659716)	+	(GCCC)n	Simple_repeat	1	69	(0)	3244781
425	31.9	5.8	0.6	chr5	141968523	141968686	(39569573)	+	MIR	SINE/MIR	78	250	(12)	3244970
247	17.4	6.8	4.2	chr5	141968852	141968923	(39569336)	+	MER5A	DNA/hAT-Charlie	27	100	(89)	3244973
286	27.5	9.9	9.9	chr5	142249731	142249778	(39288481)	C	MIR3	SINE/MIR	(6)	202	153	3245547
788	23.4	0.5	0.0	chr5	142249779	142249966	(39288293)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3245548
27	6.0	0.0	0.0	chr5	142290979	142291013	(39247246)	+	(CTTC)n	Simple_repeat	1	35	(0)	3245656
596	30.0	5.2	2.0	chr5	142291017	142291220	(39247039)	+	MIR	SINE/MIR	52	262	(0)	3245657
16	0.0	0.0	0.0	chr5	142325276	142325292	(39212967)	+	(T)n	Simple_repeat	1	17	(0)	3245723
279	20.6	14.1	1.4	chr5	142325594	142325667	(39212592)	C	MamRep488	DNA/hAT-Tip100	(77)	142	58	3245724
13	11.5	12.2	1.8	chr5	142357141	142357189	(39181070)	+	(TCCGCC)n	Simple_repeat	1	55	(0)	3245797
2537	8.5	0.0	0.0	chr5	143016429	143016721	(38521538)	+	AluSg	SINE/Alu	7	299	(11)	3247055
16	12.5	0.0	5.1	chr5	143017094	143017132	(38521127)	+	A-rich	Low_complexity	1	39	(0)	3247056
1863	14.7	0.0	3.1	chr5	143221530	143221822	(38316437)	C	AluJb	SINE/Alu	(28)	284	1	3247335
35	18.9	0.0	0.0	chr5	143221899	143221978	(38316281)	+	(TGGA)n	Simple_repeat	1	80	(0)	3247336
402	24.2	7.5	9.5	chr5	143222042	143222178	(38316081)	+	Charlie4z	DNA/hAT-Charlie	30	163	(4)	3247337
1693	16.9	4.3	1.9	chr5	148681979	148682297	(32855962)	+	MER58B	DNA/hAT-Charlie	15	341	(0)	3256277
20	21.1	0.0	0.0	chr5	148682606	148682644	(32855615)	+	A-rich	Low_complexity	1	39	(0)	3256278
2208	11.1	4.2	1.1	chr5	148682950	148683315	(32854944)	C	THE1D	LTR/ERVL-MaLR	(0)	381	4	3256279
2296	15.5	3.3	2.8	chr5	149303853	149304310	(32233949)	C	L1MB5	LINE/L1	(0)	6174	5715	3257424
245	26.4	18.9	1.2	chr5	149357557	149357717	(32180542)	C	MIRc	SINE/MIR	(27)	241	46	3257560
265	29.9	2.7	3.6	chr5	149430275	149430385	(32107874)	C	MIRb	SINE/MIR	(119)	149	40	3257719
200	9.4	0.0	3.0	chr5	149680729	149680761	(31857498)	C	L2a	LINE/L2	(17)	3409	3378	3258291
15	6.9	2.9	5.7	chr5	149681096	149681129	(31857130)	+	(TCC)n	Simple_repeat	1	35	(0)	3258292
251	19.7	7.8	2.0	chr5	150156218	150156324	(31381935)	+	MIR1_Amn	SINE/MIR	81	197	(11)	3259323
981	22.4	3.0	0.0	chr5	150214723	150214914	(31323345)	+	AluJr	SINE/Alu	2	199	(113)	3259456
4775	19.2	5.5	6.3	chr5	151046427	151047701	(30490558)	+	L1MC4a	LINE/L1	6616	7879	(3)	3261038
373	28.2	1.8	0.0	chr5	151051471	151051580	(30486679)	+	MIR3	SINE/MIR	81	192	(16)	3261046
205	36.8	2.8	1.9	chr5	151051586	151051693	(30486566)	+	MER5A	DNA/hAT-Charlie	1	109	(80)	3261047
286	29.6	8.4	1.0	chr5	154191141	154191239	(27347020)	C	MIR3	SINE/MIR	(54)	154	48	3266619
16	21.6	0.0	0.0	chr5	154191425	154191456	(27346803)	+	(C)n	Simple_repeat	1	32	(0)	3266620
197	28.6	9.5	3.7	chr5	154653888	154653996	(26884263)	C	MIR3	SINE/MIR	(77)	131	16	3267691
314	34.8	4.3	0.6	chr5	154654293	154654448	(26883811)	C	L1ME4a	LINE/L1	(4)	6120	5959	3267692
28	34.9	2.2	3.3	chr5	154682789	154682966	(26855293)	+	(CTCCCCC)n	Simple_repeat	1	182	(0)	3267769
2650	8.7	0.3	7.5	chr5	154812305	154812525	(26725734)	C	THE1C	LTR/ERVL-MaLR	(0)	375	182	3268102
2334	8.9	0.3	0.0	chr5	154812526	154812816	(26725443)	C	AluSg	SINE/Alu	(18)	292	1	3268103
2650	8.7	0.3	7.5	chr5	154812817	154812994	(26725265)	C	THE1C	LTR/ERVL-MaLR	(194)	181	5	3268102
271	20.9	18.3	0.0	chr5	154813009	154813075	(26725184)	C	MIRb	SINE/MIR	(5)	263	182	3268104
566	31.5	1.6	4.3	chr5	157253863	157254115	(24284144)	C	MIRb	SINE/MIR	(20)	248	4	3272375
317	32.1	7.0	11.1	chr5	157549448	157549808	(23988451)	+	L2c	LINE/L2	3034	3378	(9)	3272904
1170	20.8	5.9	1.9	chr5	157549816	157550112	(23988147)	+	L1MB8	LINE/L1	5748	6015	(163)	3272905
1419	17.5	5.8	4.2	chr5	157550119	157550526	(23987733)	C	MLT1C	LTR/ERVL-MaLR	(8)	382	2	3272906
611	26.1	0.8	0.0	chr5	160261827	160261945	(21276314)	+	L2b	LINE/L2	3256	3375	(0)	3277804
270	28.7	2.5	5.7	chr5	164345972	164346093	(17192166)	C	MamRep488	DNA/hAT-Tip100	(1)	218	101	3283864
2316	10.4	0.0	1.0	chr5	164346161	164346459	(17191800)	C	AluSx1	SINE/Alu	(16)	296	1	3283865
264	29.9	2.5	4.4	chr5	168415587	168415701	(13122558)	C	L2c	LINE/L2	(0)	3426	3301	3289996
44	5.5	3.5	0.0	chr5	168415816	168415873	(13122386)	+	(GT)n	Simple_repeat	1	60	(0)	3289997
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
49	2.2	0.0	0.0	chr5	170331247	170331292	(11206967)	+	(AC)n	Simple_repeat	1	46	(0)	3293404
339	29.9	10.3	3.4	chr5	171388725	171388932	(10149327)	C	MIRb	SINE/MIR	(16)	252	29	3295187
612	26.3	3.7	4.3	chr5	171484683	171484891	(10053368)	C	MIR	SINE/MIR	(9)	253	30	3295399
709	23.8	13.6	14.0	chr5	172423565	172423646	(9114613)	+	MLT1K	LTR/ERVL-MaLR	194	256	(339)	3297402
2134	11.5	3.0	0.0	chr5	172423647	172423942	(9114317)	C	AluSz6	SINE/Alu	(7)	305	1	3297403
475	22.1	12.7	9.5	chr5	172488033	172488222	(9050037)	C	L1ME3G	LINE/L1	(0)	924	728	3297549
208	11.8	0.0	0.0	chr5	172765982	172766015	(8772244)	+	MIRc	SINE/MIR	118	151	(117)	3298151
12	22.4	0.0	2.6	chr5	172771386	172771423	(8766836)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	3298156
2182	9.3	4.0	0.3	chr5	172773008	172773296	(8764963)	+	AluSc	SINE/Alu	2	301	(8)	3298158
314	30.5	4.9	9.9	chr5	172833691	172833861	(8704398)	C	MIRb	SINE/MIR	(35)	233	72	3298311
181	26.8	3.5	1.8	chr5	172834009	172834065	(8704194)	C	MIRc	SINE/MIR	(125)	143	86	3298312
31	0.0	0.0	0.0	chr5	172834268	172834296	(8703963)	+	(GGCGAGT)n	Simple_repeat	1	29	(0)	3298313
17	17.7	2.1	4.1	chr5	172834301	172834348	(8703911)	+	(GGC)n	Simple_repeat	1	49	(0)	3298314
1525	22.3	11.1	12.3	chr5	172908050	172908336	(8629923)	+	MLT1D	LTR/ERVL-MaLR	1	229	(276)	3298484
1905	11.6	0.4	0.0	chr5	172908337	172908595	(8629664)	+	AluSx4	SINE/Alu	41	300	(10)	3298485
1525	22.3	11.1	12.3	chr5	172908596	172908819	(8629440)	+	MLT1D	LTR/ERVL-MaLR	230	505	(0)	3298484
570	28.7	9.7	1.3	chr5	172942990	172943215	(8595044)	+	MIRb	SINE/MIR	6	252	(16)	3298572
429	22.1	10.3	0.0	chr5	172943627	172943739	(8594520)	C	MIRb	SINE/MIR	(116)	152	27	3298573
353	26.2	9.6	0.8	chr5	173632950	173633072	(7905187)	+	MIRb	SINE/MIR	129	263	(5)	3299950
389	36.8	3.2	2.7	chr5	173633138	173633358	(7904901)	+	MIRb	SINE/MIR	24	245	(23)	3299951
23	21.0	0.0	0.0	chr5	173888379	173888454	(7649805)	+	(GGC)n	Simple_repeat	1	76	(0)	3300519
16	5.2	0.0	0.0	chr5	176396607	176396626	(5141633)	+	(AG)n	Simple_repeat	1	20	(0)	3305163
221	28.1	3.0	9.2	chr5	176396740	176396880	(5141379)	+	L2b	LINE/L2	2804	2935	(484)	3305164
196	26.8	0.0	0.0	chr5	176610328	176610368	(4927891)	C	MIRc	SINE/MIR	(118)	150	110	3305651
15	24.0	3.2	3.1	chr5	176610566	176610627	(4927632)	+	(CCCGCC)n	Simple_repeat	1	64	(0)	3305652
413	33.0	0.0	0.0	chr5	176610752	176610860	(4927399)	+	MIRb	SINE/MIR	88	196	(72)	3305653
35	0.0	0.0	0.0	chr5	176614182	176614211	(4924048)	+	(CA)n	Simple_repeat	1	30	(0)	3305661
15	8.8	4.2	0.0	chr5	176614547	176614570	(4923689)	+	(CA)n	Simple_repeat	1	25	(0)	3305662
579	28.6	2.0	4.2	chr5	176614752	176614986	(4923273)	C	MIRb	SINE/MIR	(1)	267	22	3305663
239	18.5	11.0	0.0	chr5	176642733	176642797	(4895462)	+	L2b	LINE/L2	3292	3364	(11)	3305730
18	14.7	0.0	0.0	chr5	176642841	176642870	(4895389)	+	(C)n	Simple_repeat	1	30	(0)	3305731
21	6.1	0.0	5.3	chr5	176643114	176643151	(4895108)	+	(GGA)n	Simple_repeat	1	38	(0)	3305732
2513	14.4	10.6	7.9	chr5	176994560	176995117	(4543142)	C	LTR4	LTR/ERV1	(0)	596	22	3306366
571	19.3	5.8	0.0	chr5	176995122	176995266	(4542993)	+	L1M5	LINE/L1	5627	5780	(399)	3306357
1882	15.2	5.5	1.7	chr5	176995267	176995561	(4542698)	+	AluSz	SINE/Alu	1	307	(5)	3306367
704	27.1	11.9	8.2	chr5	177006938	177007059	(4531200)	+	L1ME3Cz	LINE/L1	270	394	(603)	3306400
2361	9.0	0.3	0.3	chr5	177007060	177007370	(4530889)	+	AluSx	SINE/Alu	2	312	(0)	3306401
716	26.5	32.5	6.0	chr5	177021309	177021657	(4516602)	C	L2a	LINE/L2	(86)	3340	2890	3306447
2300	6.8	0.7	0.3	chr5	177021658	177021951	(4516308)	C	AluSp	SINE/Alu	(18)	295	1	3306449
706	26.4	12.0	5.0	chr5	177021952	177022107	(4516152)	C	L2a	LINE/L2	(530)	2889	2698	3306447
415	29.1	6.8	2.2	chr5	177022114	177022296	(4515963)	C	L2a	LINE/L2	(916)	2503	2312	3306447
265	29.3	1.9	3.1	chr5	177087437	177087561	(4450698)	C	MIRb	SINE/MIR	(127)	141	18	3306634
11	15.9	12.2	0.0	chr5	177133528	177133576	(4404683)	+	(CGGCAG)n	Simple_repeat	1	55	(0)	3306741
13	22.5	3.6	3.5	chr5	177133968	177134022	(4404237)	+	G-rich	Low_complexity	1	57	(0)	3306742
18	26.1	1.2	5.8	chr5	177366518	177366603	(4171656)	+	(CTGT)n	Simple_repeat	1	87	(0)	3307272
12	19.1	2.6	2.6	chr5	177366812	177366849	(4171410)	+	G-rich	Low_complexity	1	39	(0)	3307273
12	31.1	1.8	0.0	chr5	177404202	177404256	(4134003)	+	G-rich	Low_complexity	1	56	(0)	3307346
2020	9.7	4.5	0.4	chr5	177428440	177428717	(4109542)	C	AluSz	SINE/Alu	(22)	290	1	3307406
196	33.8	4.0	2.7	chr5	177428721	177428793	(4109466)	+	MIR3	SINE/MIR	82	155	(53)	3307407
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
11	9.7	8.6	2.6	chr5	177446973	177447007	(4091252)	+	G-rich	Low_complexity	1	38	(0)	3307434
12	21.7	0.0	0.0	chr5	177447121	177447152	(4091107)	+	GA-rich	Low_complexity	1	32	(0)	3307435
16	16.8	0.0	0.0	chr5	177447249	177447276	(4090983)	+	(C)n	Simple_repeat	1	28	(0)	3307436
26	0.0	0.0	0.0	chr5	177456674	177456701	(4081558)	+	(A)n	Simple_repeat	1	28	(0)	3307455
616	13.6	0.0	0.0	chr5	177475433	177475535	(4062724)	C	L1MC3	LINE/L1	(2)	7783	7681	3307485
289	33.0	3.0	0.0	chr5	177475671	177475767	(4062492)	+	L2	LINE/L2	1961	2060	(1359)	3307486
15	28.8	1.8	0.0	chr5	177491435	177491489	(4046770)	+	(AGAC)n	Simple_repeat	1	56	(0)	3307523
36	2.7	0.0	0.0	chr5	177497009	177497046	(4041213)	+	(GGGGA)n	Simple_repeat	1	38	(0)	3307529
17	13.5	0.0	0.0	chr5	177497383	177497415	(4040844)	+	(GGCGGG)n	Simple_repeat	1	33	(0)	3307530
47	0.0	0.0	0.0	chr5	177554490	177554531	(3983728)	+	(CGC)n	Simple_repeat	1	42	(0)	3307611
311	25.6	11.2	2.1	chr5	177554843	177554956	(3983303)	C	MIRc	SINE/MIR	(32)	236	108	3307612
190	28.2	18.9	2.8	chr5	177555054	177555159	(3983100)	C	L2b	LINE/L2	(32)	3343	3217	3307613
279	22.0	3.6	14.3	chr5	177592933	177593022	(3945237)	C	Charlie18a	DNA/hAT-Charlie	(76)	266	192	3307702
471	32.0	6.9	3.0	chr5	177599655	177599709	(3938550)	C	MIR	SINE/MIR	(187)	75	17	3307712
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
15	13.9	0.0	0.0	chr5	178627215	178627238	(2911021)	+	(C)n	Simple_repeat	1	24	(0)	3309511
27	0.0	0.0	0.0	chr5	179805977	179806002	(1732257)	+	(CCTC)n	Simple_repeat	1	26	(0)	3311611
12	32.7	1.5	1.5	chr5	179806382	179806447	(1731812)	+	(GCGCCC)n	Simple_repeat	1	67	(0)	3311612
10116	3.6	5.4	0.1	chr5	179834413	179835696	(1702563)	C	SVA_D	Retroposon/SVA	(0)	1386	31	3311658
13	20.7	3.6	5.2	chr5	180071333	180071388	(1466871)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	3312025
1700	17.3	4.1	0.6	chr5	180072515	180072840	(1465419)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	3312027
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
1936	14.2	2.1	0.0	chr5	180093358	180093632	(1444627)	C	AluJr	SINE/Alu	(30)	282	2	3312070
246	21.6	8.3	0.0	chr5	180093824	180093911	(1444348)	C	HAL1	LINE/L1	(701)	1806	1711	3312071
1185	25.7	8.1	5.2	chr5	180094023	180094261	(1443998)	C	L1ME4b	LINE/L1	(293)	599	351	3312072
2342	7.4	0.6	0.6	chr5	180292807	180293118	(1245141)	+	AluSx1	SINE/Alu	1	312	(0)	3312367
11	17.1	2.9	2.8	chr5	180625055	180625089	(913170)	+	(AGCCAC)n	Simple_repeat	1	36	(0)	3312990
16	5.3	0.0	0.0	chr5	180860690	180860709	(677550)	+	(A)n	Simple_repeat	1	20	(0)	3313358
2468	8.0	0.3	0.0	chr5	181188094	181188405	(349854)	+	AluSp	SINE/Alu	1	313	(0)	3313823
670	1.4	0.0	0.0	chr5	181188416	181188488	(349771)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313824
15	17.7	2.6	0.0	chr5	181204374	181204411	(333848)	+	G-rich	Low_complexity	1	39	(0)	3313845
37	0.0	0.0	0.0	chr5	181205757	181205788	(332471)	+	(CA)n	Simple_repeat	1	32	(0)	3313848
328	29.6	11.4	4.1	chr5	181205822	181206385	(331874)	+	L2b	LINE/L2	2921	3370	(5)	3313849
13	14.4	5.0	2.4	chr6	692814	692853	(170113126)	+	G-rich	Low_complexity	1	42	(0)	3315113
14	19.0	5.0	4.8	chr6	2634350	2634409	(168171570)	+	(CCCGCAG)n	Simple_repeat	1	63	(0)	3317715
226	29.1	12.0	2.6	chr6	2737988	2738100	(168067879)	C	MIR	SINE/MIR	(97)	165	41	3317851
19	11.6	0.0	0.0	chr6	2765183	2765210	(168040769)	+	(C)n	Simple_repeat	1	28	(0)	3317888
2203	12.4	0.0	0.0	chr6	2858331	2858629	(167947350)	C	AluSg	SINE/Alu	(11)	299	1	3318012
2119	12.0	1.6	1.0	chr6	2902509	2902817	(167903162)	C	AluSz	SINE/Alu	(1)	311	1	3318086
429	29.8	9.3	7.5	chr6	3355843	3356096	(167449883)	+	L1ME3E	LINE/L1	5837	6095	(147)	3318774
32	3.0	0.0	0.0	chr6	3457092	3457125	(167348854)	+	(CTC)n	Simple_repeat	1	34	(0)	3318917
2981	15.8	1.7	1.3	chr6	3753120	3753621	(167052358)	+	LTR45	LTR/ERV1	1	509	(16)	3319356
617	21.0	4.6	0.0	chr6	3999877	4000000	(166805979)	+	MamRep38	DNA/hAT	2	131	(164)	3319782
508	22.9	3.7	5.8	chr6	4000015	4000153	(166805826)	+	MamRep38	DNA/hAT	160	295	(0)	3319783
61	29.6	3.0	5.6	chr6	4135582	4135982	(166669997)	+	G-rich	Low_complexity	1	413	(0)	3320017
18	12.2	0.0	0.0	chr6	4675930	4675956	(166130023)	+	(G)n	Simple_repeat	1	27	(0)	3320844
13	26.6	2.2	0.0	chr6	4675957	4675968	(166130011)	+	GA-rich	Low_complexity	14	46	(0)	3320845
16	26.4	1.9	0.0	chr6	4675969	4675976	(166130003)	+	(CGGAGG)n	Simple_repeat	2	55	(0)	3320846
478	25.3	2.4	2.4	chr6	4676048	4676213	(166129766)	C	MER5A	DNA/hAT-Charlie	(23)	166	1	3320847
29	22.4	1.8	5.4	chr6	4776814	4776922	(166029057)	+	(CCCCGCC)n	Simple_repeat	1	111	(0)	3321055
277	21.1	0.0	0.0	chr6	4777353	4777404	(166028575)	C	Eulor9C	DNA	(62)	208	157	3321056
1893	11.2	1.0	11.2	chr6	4780221	4780568	(166025411)	C	AluSz6	SINE/Alu	(0)	312	1	3321064
946	14.9	15.9	1.3	chr6	5294868	5295092	(165510887)	C	MER21A	LTR/ERVL	(667)	264	1	3321814
218	33.1	10.5	2.9	chr6	5295145	5295284	(165510695)	C	MIRb	SINE/MIR	(6)	262	111	3321815
2461	23.6	4.2	0.2	chr6	6730812	6731342	(164074637)	C	MLT1F1	LTR/ERVL-MaLR	(16)	553	1	3323825
15	5.5	0.0	0.0	chr6	7106501	7106519	(163699460)	+	(G)n	Simple_repeat	1	19	(0)	3324623
34	2.8	0.0	0.0	chr6	7107674	7107709	(163698270)	+	(CGC)n	Simple_repeat	1	36	(0)	3324624
26	0.0	3.0	2.9	chr6	7108317	7108349	(163697630)	+	(TCC)n	Simple_repeat	1	34	(0)	3324625
14	14.5	3.2	0.0	chr6	7112449	7112479	(163693500)	+	(TTTC)n	Simple_repeat	1	32	(0)	3324629
1623	22.2	7.2	3.1	chr6	7114728	7115177	(163690802)	C	Tigger11a	DNA/TcMar-Tigger	(58)	677	208	3324633
16	21.6	0.0	0.0	chr6	7201495	7201526	(163604453)	+	(C)n	Simple_repeat	1	32	(0)	3324761
1423	15.0	0.4	5.8	chr6	7693697	7693956	(163112023)	C	AluJr	SINE/Alu	(15)	297	52	3325588
189	37.1	2.0	1.0	chr6	7911846	7911943	(162894036)	+	L2	LINE/L2	2523	2621	(798)	3325892
1028	31.4	17.5	3.3	chr6	7912199	7913363	(162892616)	+	L2a	LINE/L2	212	1577	(1842)	3325893
30	0.0	0.0	0.0	chr6	10414465	10414492	(160391487)	+	(GAAT)n	Simple_repeat	1	28	(0)	3329453
432	26.6	16.5	3.4	chr6	10642919	10643096	(160162883)	C	MIR	SINE/MIR	(8)	260	58	3329907
283	35.3	7.0	5.0	chr6	10643334	10643697	(160162282)	+	L2	LINE/L2	1075	1446	(1973)	3329908
28	3.3	0.0	0.0	chr6	11938960	11938990	(158866989)	+	(TTTA)n	Simple_repeat	1	31	(0)	3331945
22	0.0	0.0	0.0	chr6	11939027	11939050	(158866929)	+	(A)n	Simple_repeat	1	24	(0)	3331946
20	11.2	0.0	0.0	chr6	12011271	12011299	(158794680)	+	(C)n	Simple_repeat	1	29	(0)	3332070
18	19.4	8.1	2.5	chr6	12012201	12012274	(158793705)	+	(CGC)n	Simple_repeat	1	80	(0)	3332072
16	18.5	4.3	6.8	chr6	12012334	12012403	(158793576)	+	(GGC)n	Simple_repeat	1	73	(0)	3332073
16	23.4	5.5	0.0	chr6	12012448	12012502	(158793477)	+	(CGC)n	Simple_repeat	1	58	(0)	3332074
18	17.5	0.0	0.0	chr6	12012603	12012634	(158793345)	+	G-rich	Low_complexity	1	32	(0)	3332075
16	27.8	1.9	0.0	chr6	12012653	12012677	(158793302)	+	(GCGT)n	Simple_repeat	1	53	(0)	3332076
22	3.9	0.0	0.0	chr6	12012678	12012704	(158793275)	+	(GT)n	Simple_repeat	1	27	(0)	3332077
14	18.3	0.0	7.8	chr6	12013008	12013058	(158792921)	+	(GGTCG)n	Simple_repeat	1	51	(0)	3332078
14	18.5	7.0	0.0	chr6	12013074	12013116	(158792863)	+	GA-rich	Low_complexity	1	46	(0)	3332079
629	25.5	8.6	0.0	chr6	12014039	12014230	(158791749)	C	MIRb	SINE/MIR	(20)	248	39	3332081
265	24.3	17.7	0.0	chr6	12014342	12014485	(158791494)	+	MIR	SINE/MIR	78	252	(10)	3332082
690	28.2	11.5	3.0	chr6	12014764	12015096	(158790883)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	47	3332083
16	19.1	0.0	0.0	chr6	13486229	13486258	(157319721)	+	(C)n	Simple_repeat	1	30	(0)	3334348
16	15.2	0.0	3.2	chr6	13486258	13486288	(157319691)	+	(CA)n	Simple_repeat	1	31	(0)	3334349
1496	16.8	7.5	0.8	chr6	14449128	14449389	(156356590)	C	AluJb	SINE/Alu	(25)	287	7	3336024
342	29.1	9.9	1.7	chr6	14449408	14449582	(156356397)	+	MamRep1879	DNA/hAT-Tip100?	24	214	(2)	3336025
1529	20.2	3.6	7.4	chr6	14453945	14454350	(156351629)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3336028
306	30.1	6.6	0.0	chr6	14463879	14463991	(156341988)	C	L2c	LINE/L2	(41)	3346	3226	3336045
12	16.9	2.9	2.8	chr6	14464045	14464079	(156341900)	+	(CAA)n	Simple_repeat	1	36	(0)	3336046
29	0.0	0.0	0.0	chr6	14464088	14464114	(156341865)	+	(AGC)n	Simple_repeat	1	27	(0)	3336047
601	29.2	3.4	5.4	chr6	14689622	14689860	(156116119)	+	MIRb	SINE/MIR	3	236	(32)	3336390
2260	8.9	0.4	0.0	chr6	14689927	14690207	(156115772)	+	AluSp	SINE/Alu	2	283	(30)	3336391
671	18.9	8.7	4.0	chr6	14735266	14735441	(156070538)	C	LTR79	LTR/ERVL	(0)	527	343	3336468
399	29.0	11.2	1.8	chr6	14735485	14735709	(156070270)	C	LTR79	LTR/ERVL	(270)	257	9	3336468
2308	6.6	3.3	0.0	chr6	15018100	15018388	(155787591)	+	AluSx1	SINE/Alu	1	299	(13)	3337017
415	20.7	8.3	1.0	chr6	15018389	15018495	(155787484)	C	MLT1A	LTR/ERVL-MaLR	(232)	158	46	3337016
486	23.1	12.0	8.0	chr6	15018496	15019063	(155786916)	+	MER34A	LTR/ERV1	1	587	(0)	3337018
508	24.0	18.4	2.8	chr6	15184107	15184389	(155621590)	C	MLT1J	LTR/ERVL-MaLR	(171)	341	5	3337474
256	33.3	4.3	2.9	chr6	15184620	15184755	(155621224)	+	L2b	LINE/L2	3219	3333	(93)	3337475
2091	12.9	0.0	0.0	chr6	15184784	15185063	(155620916)	+	AluSq2	SINE/Alu	2	281	(32)	3337476
16	25.3	4.3	2.7	chr6	15246034	15246041	(155559938)	+	(GCT)n	Simple_repeat	1	12	(61)	3337659
19	4.0	0.0	0.0	chr6	15246042	15246067	(155559912)	+	(GCC)n	Simple_repeat	1	26	(0)	3337660
16	25.3	4.3	2.7	chr6	15246068	15246103	(155559876)	+	(GCT)n	Simple_repeat	13	73	(0)	3337659
15	5.6	0.0	0.0	chr6	15246251	15246269	(155559710)	+	(TG)n	Simple_repeat	1	19	(0)	3337661
19	21.4	6.9	1.3	chr6	15248822	15248893	(155557086)	+	(GGC)n	Simple_repeat	1	77	(0)	3337662
250	26.6	14.5	1.6	chr6	15249508	15249633	(155556346)	+	MIRc	SINE/MIR	124	268	(0)	3337663
332	26.1	0.0	0.0	chr6	15275392	15275460	(155530519)	C	UCON39	DNA/TcMar-Tigger	(18)	167	99	3337706
16	9.3	0.0	0.0	chr6	15275522	15275544	(155530435)	+	(C)n	Simple_repeat	1	23	(0)	3337707
2161	11.9	0.0	1.0	chr6	15438747	15439048	(155366931)	+	AluSx1	SINE/Alu	1	299	(13)	3337954
3638	12.5	2.2	2.2	chr6	15569021	15569642	(155236337)	+	LTR26E	LTR/ERV1	1	622	(0)	3338089
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
9544	11.5	1.7	11.6	chr6	16196900	16198653	(154607326)	C	LTR12C	LTR/ERV1	(0)	1579	3	3339137
587	24.1	7.7	7.7	chr6	16237090	16237296	(154568683)	C	MIRb	SINE/MIR	(8)	260	54	3339206
375	31.1	8.1	1.3	chr6	16237379	16237528	(154568451)	+	MIRb	SINE/MIR	91	251	(17)	3339207
2100	12.8	11.7	1.8	chr6	16253292	16253674	(154552305)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3339236
26	24.5	0.0	0.0	chr6	16439339	16439405	(154366574)	+	G-rich	Low_complexity	1	67	(0)	3339525
2326	10.0	0.0	0.3	chr6	16439792	16440090	(154365889)	+	AluSq2	SINE/Alu	1	298	(15)	3339526
37	5.1	0.0	0.0	chr6	16761058	16761098	(154044881)	+	(AC)n	Simple_repeat	1	41	(0)	3340015
2373	10.2	0.0	0.0	chr6	17701382	17701684	(153104295)	+	AluSg7	SINE/Alu	1	303	(6)	3341628
2007	12.1	0.3	1.4	chr6	17701685	17701832	(153104147)	+	AluSg	SINE/Alu	135	280	(30)	3341627
29	0.0	7.1	2.2	chr6	17987667	17987708	(152818271)	+	(GGC)n	Simple_repeat	1	45	(0)	3342186
197	24.7	2.7	6.4	chr6	19805253	19805330	(151000649)	C	L2b	LINE/L2	(19)	3356	3282	3344952
21	4.0	0.0	0.0	chr6	20034259	20034284	(150771695)	+	(GT)n	Simple_repeat	1	26	(0)	3345294
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
26	26.9	1.2	1.1	chr6	20403657	20403742	(150402237)	+	(CGCCCC)n	Simple_repeat	1	87	(0)	3345989
12	8.8	10.5	2.4	chr6	20403887	20403924	(150402055)	+	(GTTGAGCG)n	Simple_repeat	1	42	(0)	3345990
281	24.6	0.9	5.5	chr6	20471756	20471873	(150334106)	C	L1ME4a	LINE/L1	(86)	6038	5966	3346098
52	2.1	0.0	0.0	chr6	20472026	20472074	(150333905)	+	(AC)n	Simple_repeat	1	49	(0)	3346099
1889	17.2	1.0	1.0	chr6	20528199	20528494	(150277485)	+	AluJb	SINE/Alu	11	306	(6)	3346221
1128	9.0	0.0	0.0	chr6	20528814	20528947	(150277032)	+	AluSx	SINE/Alu	1	134	(178)	3346222
2354	11.2	0.0	1.6	chr6	20528949	20529253	(150276726)	+	AluSx1	SINE/Alu	1	300	(12)	3346223
802	6.7	0.0	0.0	chr6	21995170	21995259	(148810720)	+	AluSq2	SINE/Alu	176	265	(48)	3348685
386	30.9	5.5	4.2	chr6	21995451	21995592	(148810387)	C	MIRb	SINE/MIR	(100)	168	25	3348686
11	21.8	8.3	1.5	chr6	22026054	22026113	(148779866)	+	(CTTCCT)n	Simple_repeat	1	65	(0)	3348733
267	33.1	3.7	2.3	chr6	24755257	24755389	(146050590)	C	CR1-3_Croc	LINE/CR1	(1364)	2241	2107	3352487
242	36.2	5.0	9.2	chr6	24755469	24755790	(146050189)	C	L3	LINE/CR1	(1079)	3020	2706	3352486
2133	12.2	0.0	0.3	chr6	24755791	24756078	(146049901)	+	AluSc	SINE/Alu	1	287	(22)	3352488
240	21.4	0.0	5.1	chr6	24774448	24774506	(146031473)	+	L2a	LINE/L2	3353	3408	(18)	3352542
318	38.1	7.5	5.5	chr6	25720282	25720624	(145085355)	C	L2c	LINE/L2	(105)	3270	2919	3354012
315	28.8	0.0	0.9	chr6	25720776	25720880	(145085099)	+	L1ME4c	LINE/L1	382	485	(345)	3354013
2053	12.4	1.7	0.7	chr6	25720944	25721233	(145084746)	+	AluSx	SINE/Alu	1	293	(19)	3354014
381	20.7	3.3	3.3	chr6	25963819	25963908	(144842071)	+	LTR9D	LTR/ERV1	468	557	(88)	3354387
18	11.5	5.3	0.0	chr6	25963911	25963948	(144842031)	+	(CAA)n	Simple_repeat	1	40	(0)	3354388
904	14.0	4.7	2.4	chr6	25964033	25964200	(144841779)	C	LTR49	LTR/ERV1	(0)	595	424	3354389
23	23.8	0.0	6.0	chr6	25964219	25964302	(144841677)	+	(TATG)n	Simple_repeat	1	84	(0)	3354390
1184	16.5	0.4	11.3	chr6	25964337	25964637	(144841342)	C	LTR29	LTR/ERV1	(218)	404	137	3354391
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
1330	28.5	3.9	10.5	chr6	26208438	26209012	(144596967)	C	L2a	LINE/L2	(608)	2811	2252	3354824
423	12.6	27.7	3.9	chr6	26286217	26286319	(144519660)	C	FLAM_C	SINE/Alu	(6)	137	1	3354953
651	0.0	0.0	0.0	chr6	26286526	26286597	(144519382)	+	tRNA-Met-i	tRNA	1	72	(3)	3354954
682	0.0	0.0	0.0	chr6	26299677	26299749	(144506230)	+	tRNA-Arg-CGA	tRNA	1	73	(3)	3354966
13	16.8	0.0	0.0	chr6	26304679	26304706	(144501273)	+	(TTCT)n	Simple_repeat	1	28	(0)	3354976
36	0.0	0.0	0.0	chr6	26304708	26304740	(144501239)	+	(TTTTGT)n	Simple_repeat	1	33	(0)	3354977
391	28.8	0.9	0.9	chr6	26304759	26304863	(144501116)	+	SVA_E	Retroposon/SVA	207	311	(1071)	3354978
725	16.5	0.0	0.0	chr6	26304774	26304882	(144501097)	C	FLAM_C	SINE/Alu	(34)	109	1	3354979
210	31.3	0.0	4.8	chr6	26305006	26305109	(144500870)	C	MER5B	DNA/hAT-Charlie	(63)	115	17	3354980
662	0.0	0.0	0.0	chr6	26319102	26319173	(144486806)	C	tRNA-Trp-TGG	tRNA	(3)	72	1	3355017
650	1.4	0.0	0.0	chr6	26328140	26328212	(144477767)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355034
2075	10.5	1.4	1.4	chr6	26328471	26328766	(144477213)	C	AluSz	SINE/Alu	(13)	299	4	3355035
1155	26.6	7.1	3.4	chr6	26336287	26336722	(144469257)	+	MER90	LTR/ERV1	107	559	(16)	3355050
744	29.3	6.3	6.6	chr6	26336934	26337236	(144468743)	C	LTR33A	LTR/ERVL	(126)	394	93	3355051
834	17.3	0.6	4.8	chr6	26436178	26436345	(144369634)	C	AluJo	SINE/Alu	(11)	301	141	3355231
816	26.6	5.3	0.4	chr6	26436872	26437120	(144368859)	+	MIR	SINE/MIR	1	262	(0)	3355232
392	27.4	16.4	6.4	chr6	26516621	26517183	(144288796)	+	L2a	LINE/L2	2792	3409	(17)	3355378
583	9.6	0.0	0.0	chr6	26521208	26521290	(144284689)	+	tRNA-Leu-CTG	tRNA	1	83	(3)	3355398
2201	10.4	0.0	0.0	chr6	26570159	26570446	(144235533)	C	AluSx1	SINE/Alu	(24)	288	1	3355493
29	0.0	0.0	0.0	chr6	26570449	26570476	(144235503)	+	(AAAAC)n	Simple_repeat	1	28	(0)	3355494
2368	8.1	0.0	0.0	chr6	26570768	26571065	(144234914)	C	AluSq4	SINE/Alu	(13)	298	1	3355495
548	0.0	0.0	21.3	chr6	27020346	27020439	(143785540)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3356155
693	2.4	0.0	0.0	chr6	27097306	27097387	(143708592)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3356287
2221	9.3	3.7	1.7	chr6	27142271	27142561	(143663418)	C	AluSq10	SINE/Alu	(14)	299	3	3356359
905	23.6	12.0	0.6	chr6	27142562	27142628	(143663351)	+	Charlie5	DNA/hAT-Charlie	2532	2608	(16)	3356358
2352	11.4	0.7	0.0	chr6	27142637	27142934	(143663045)	C	AluSx4	SINE/Alu	(10)	300	1	3356360
2268	12.1	0.0	0.0	chr6	27144181	27144460	(143661519)	+	AluSx1	SINE/Alu	2	281	(31)	3356363
16	5.2	0.0	0.0	chr6	27144461	27144480	(143661499)	+	(G)n	Simple_repeat	1	20	(0)	3356364
50	0.0	0.0	0.0	chr6	27145296	27145338	(143660641)	+	(AC)n	Simple_repeat	1	43	(0)	3356366
2402	7.4	0.3	0.3	chr6	27172597	27172894	(143633085)	+	AluSx	SINE/Alu	1	298	(14)	3356421
20	3.7	0.0	0.0	chr6	27172908	27172935	(143633044)	+	(TTTTG)n	Simple_repeat	1	28	(0)	3356422
1890	14.7	2.3	1.6	chr6	27173251	27173428	(143632551)	C	AluSz6	SINE/Alu	(2)	310	137	3356423
33	0.0	0.0	0.0	chr6	27173429	27173459	(143632520)	+	(T)n	Simple_repeat	1	31	(0)	3356424
1890	14.7	2.3	1.6	chr6	27173460	27173586	(143632393)	C	AluSz6	SINE/Alu	(184)	128	3	3356423
20582	9.6	0.8	3.9	chr6	27188071	27190816	(143615163)	+	HERVKC4-int	LTR/ERVK	1	2671	(2591)	3356439
417	14.5	0.0	0.0	chr6	27205534	27205595	(143600384)	C	MER31A	LTR/ERV1	(201)	284	223	3356468
628	4.1	0.0	0.0	chr6	27206088	27206160	(143599819)	C	tRNA-Val-GTG	tRNA	(3)	73	1	3356469
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
644	2.7	0.0	0.0	chr6	27275210	27275284	(143530695)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356626
608	5.5	0.0	0.0	chr6	27280270	27280342	(143525637)	C	tRNA-Val-GTG	tRNA	(3)	73	1	3356638
643	0.0	0.0	0.0	chr6	27479674	27479745	(143326234)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	3356952
1613	22.1	8.4	10.8	chr6	27479944	27480156	(143325823)	+	L1MC4	LINE/L1	7330	7540	(502)	3356953
226	6.5	0.0	0.0	chr6	27480157	27480187	(143325792)	+	MADE1	DNA/TcMar-Mariner	49	79	(1)	3356954
33	0.0	0.0	0.0	chr6	27601452	27601487	(143204492)	+	(A)n	Simple_repeat	1	36	(0)	3357198
25	0.0	0.0	0.0	chr6	27601487	27601514	(143204465)	+	(AT)n	Simple_repeat	1	28	(0)	3357199
1026	14.0	15.7	4.3	chr6	27601965	27602199	(143203780)	C	AluJo	SINE/Alu	(7)	305	39	3357200
1009	24.6	16.1	4.0	chr6	27672796	27673090	(143132889)	+	L2	LINE/L2	1073	1426	(1993)	3357342
2085	9.2	0.7	3.3	chr6	27673091	27673393	(143132586)	+	AluSx	SINE/Alu	2	296	(16)	3357343
1009	24.6	16.1	4.0	chr6	27673394	27673542	(143132437)	+	L2	LINE/L2	1427	1581	(1838)	3357342
405	24.3	12.3	0.0	chr6	27673569	27673704	(143132275)	+	L2	LINE/L2	1989	2143	(1276)	3357342
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
13	18.9	0.0	0.0	chr6	27777763	27777792	(143028187)	+	A-rich	Low_complexity	1	30	(0)	3357575
28	0.0	0.0	0.0	chr6	27777806	27777831	(143028148)	+	(AAC)n	Simple_repeat	1	26	(0)	3357576
633	1.4	0.0	0.0	chr6	27777885	27777956	(143028023)	+	tRNA-Met-i	tRNA	1	72	(3)	3357577
16	4.1	8.0	0.0	chr6	27778039	27778063	(143027916)	+	(TA)n	Simple_repeat	1	27	(0)	3357578
24	3.5	0.0	0.0	chr6	27778063	27778091	(143027888)	+	(TC)n	Simple_repeat	1	29	(0)	3357579
459	31.2	15.4	0.8	chr6	27778205	27778459	(143027520)	+	Charlie2b	DNA/hAT-Charlie	834	1132	(1650)	3357580
639	19.5	0.8	0.8	chr6	27823704	27823821	(142982158)	C	AluJo	SINE/Alu	(194)	118	1	3357656
5817	8.0	4.2	6.0	chr6	27826626	27828514	(142977465)	C	SVA_D	Retroposon/SVA	(450)	936	8	3357662
632	17.2	1.5	2.3	chr6	28159779	28159909	(142646070)	+	MER20	DNA/hAT-Charlie	36	165	(54)	3358158
13	7.7	0.0	9.1	chr6	28159912	28159944	(142646035)	+	(CCCCG)n	Simple_repeat	1	33	(0)	3358159
281	14.8	3.6	0.0	chr6	28159945	28159998	(142645981)	+	MER20	DNA/hAT-Charlie	160	215	(4)	3358160
534	24.9	26.3	3.1	chr6	28219124	28219446	(142586533)	+	L1ME4b	LINE/L1	350	750	(142)	3358269
345	17.1	0.0	0.8	chr6	28544467	28544542	(142261437)	+	AluY	SINE/Alu	1	59	(74)	3358802
396	14.1	4.5	11.5	chr6	28544611	28544706	(142261273)	+	FLAM_C	SINE/Alu	41	129	(4)	3358802
1274	28.8	9.1	1.5	chr6	28544749	28545418	(142260561)	+	L1M4b	LINE/L1	4212	4937	(2069)	3358794
1247	25.5	13.6	2.0	chr6	28565513	28566139	(142239840)	C	L1ME1	LINE/L1	(853)	5389	4682	3358837
1768	17.5	5.3	5.5	chr6	28566269	28566685	(142239294)	+	LTR2C	LTR/ERV1	86	501	(0)	3358839
893	20.7	0.0	0.0	chr6	28566734	28566878	(142239101)	C	AluJo	SINE/Alu	(31)	281	137	3358840
3704	6.3	0.7	0.0	chr6	28566946	28567405	(142238574)	C	LTR2	LTR/ERV1	(0)	463	1	3358841
180	26.7	0.0	3.2	chr6	28709755	28709816	(142096163)	C	MER5A	DNA/hAT-Charlie	(26)	163	104	3359064
667	1.4	0.0	0.0	chr6	28710589	28710660	(142095319)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359065
4552	15.3	4.7	1.1	chr6	28710855	28711641	(142094338)	+	Tigger7	DNA/TcMar-Tigger	25	840	(1651)	3359066
1812	6.0	0.0	3.8	chr6	28734898	28735132	(142070847)	C	AluY	SINE/Alu	(6)	305	80	3359116
536	12.3	0.0	0.0	chr6	28735428	28735500	(142070479)	C	tRNA-Ala-GCY_	tRNA	(2)	73	1	3359117
643	0.0	0.0	0.0	chr6	28758364	28758435	(142047544)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359169
600	4.2	0.0	0.0	chr6	28789770	28789841	(142016138)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359221
1095	6.3	1.4	0.0	chr6	28789996	28790137	(142015842)	+	AluSq	SINE/Alu	154	297	(16)	3359222
619	1.4	0.0	0.0	chr6	28838444	28838515	(141967464)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359318
619	1.4	0.0	0.0	chr6	28863685	28863756	(141942223)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359354
556	6.8	0.0	0.0	chr6	28953265	28953337	(141852642)	C	tRNA-Met_	tRNA	(3)	73	1	3359531
11043	12.2	0.7	0.8	chr6	28960409	28962045	(141843934)	+	L1PB1	LINE/L1	255	1880	(4983)	3359541
716	1.2	0.0	0.0	chr6	28989002	28989083	(141816896)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3359590
473	31.1	11.7	7.4	chr6	29016881	29017519	(141788460)	+	MamGypLTR3	LTR/Gypsy	208	877	(17)	3359639
16	4.1	4.0	0.0	chr6	29628021	29628045	(141177934)	+	(GGA)n	Simple_repeat	1	26	(0)	3360366
13	29.9	2.2	5.4	chr6	29628296	29628385	(141177594)	+	GA-rich	Low_complexity	1	92	(0)	3360367
18	13.7	1.7	8.3	chr6	29632912	29632970	(141173009)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3360372
22	15.1	1.8	3.6	chr6	29633070	29633124	(141172855)	+	G-rich	Low_complexity	1	56	(0)	3360373
59	0.0	1.9	0.0	chr6	29633967	29634020	(141171959)	+	(GT)n	Simple_repeat	1	55	(0)	3360375
2018	22.0	9.2	6.2	chr6	29634170	29634250	(141171729)	C	MER20B	DNA/hAT-Charlie	(4)	779	699	3360376
1943	9.8	4.2	1.8	chr6	29634251	29634525	(141171454)	+	AluSz	SINE/Alu	14	295	(17)	3360377
195	33.0	11.5	2.9	chr6	30066560	30066662	(140739317)	+	L2b	LINE/L2	3220	3332	(43)	3361029
13	22.5	2.0	3.9	chr6	30345413	30345462	(140460517)	+	G-rich	Low_complexity	1	51	(0)	3361461
13	17.2	8.7	0.0	chr6	30556132	30556177	(140249802)	+	(TCTGCT)n	Simple_repeat	1	50	(0)	3361797
336	9.8	4.7	7.6	chr6	30618253	30618318	(140187661)	C	U6	snRNA	(43)	64	1	3361896
13	10.7	9.5	2.2	chr6	30647306	30647347	(140158632)	+	GA-rich	Low_complexity	1	46	(0)	3361953
284	34.2	4.8	1.9	chr6	30681971	30682131	(140123848)	C	X7C_LINE	LINE/CR1	(36)	200	35	3362018
12	20.8	4.3	2.1	chr6	30685565	30685610	(140120369)	+	(TCTCTCTG)n	Simple_repeat	1	48	(0)	3362021
18	13.5	0.0	0.0	chr6	30685711	30685743	(140120236)	+	(TGC)n	Simple_repeat	1	33	(0)	3362022
329	31.9	4.0	1.6	chr6	30769917	30770037	(140035942)	C	HAL1b	LINE/L1	(31)	2390	2267	3362189
302	30.4	9.9	8.6	chr6	30770041	30770389	(140035590)	+	L2c	LINE/L2	2996	3349	(38)	3362190
5182	21.8	6.9	3.5	chr6	30872466	30872526	(139933453)	C	L1MDa	LINE/L1	(5599)	1034	970	3362413
47	0.0	0.0	0.0	chr6	30872527	30872566	(139933413)	+	(GT)n	Simple_repeat	1	40	(0)	3362418
5182	21.8	6.9	3.5	chr6	30872567	30872924	(139933055)	C	L1MDa	LINE/L1	(5664)	969	583	3362413
1679	15.5	4.3	6.1	chr6	30872964	30873340	(139932639)	+	LTR8A	LTR/ERV1	358	727	(0)	3362419
20	22.6	0.0	4.5	chr6	30955811	30955877	(139850102)	+	(GCCCCCA)n	Simple_repeat	1	67	(0)	3362552
182	27.3	3.3	5.4	chr6	30955914	30956006	(139849973)	C	MIRc	SINE/MIR	(8)	260	170	3362553
295	30.9	6.7	0.0	chr6	30956043	30956139	(139849840)	C	MIRb	SINE/MIR	(92)	176	73	3362554
16	10.0	0.0	0.0	chr6	30988784	30988805	(139817174)	+	(G)n	Simple_repeat	1	22	(0)	3362605
952	33.5	6.5	2.4	chr6	31086906	31087440	(139718539)	C	L4_B_Mam	LINE/RTE-X	(4223)	718	161	3362781
420	19.8	9.8	0.0	chr6	31087426	31087526	(139718453)	+	L1MC5a	LINE/L1	2656	2767	(10)	3362786
974	10.9	0.0	0.7	chr6	31087849	31087985	(139717994)	+	FLAM_C	SINE/Alu	1	136	(7)	3362787
753	15.1	2.2	9.1	chr6	31088026	31088090	(139717889)	+	L1MB4	LINE/L1	5765	5822	(358)	3362788
11110	18.6	7.7	4.7	chr6	31102132	31102888	(139703091)	C	L1M1	LINE/L1	(5437)	2128	1279	3362823
2265	7.3	0.7	0.3	chr6	31400352	31400638	(139405341)	+	AluSp	SINE/Alu	1	288	(25)	3363278
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
619	28.1	8.7	2.1	chr6	31637886	31638121	(139167858)	C	MLT1H1	LTR/ERVL-MaLR	(49)	506	254	3363655
327	26.9	6.9	1.8	chr6	31691018	31691127	(139114852)	C	MIRc	SINE/MIR	(138)	130	15	3363722
617	24.2	8.6	2.8	chr6	31691146	31691371	(139114608)	+	MIR	SINE/MIR	29	268	(0)	3363723
14	18.3	2.7	0.0	chr6	31691735	31691771	(139114208)	+	G-rich	Low_complexity	1	38	(0)	3363724
305	24.6	2.3	0.0	chr6	31692082	31692187	(139113792)	C	Charlie9	DNA/hAT-Charlie	(1)	2756	2683	3363725
249	30.0	10.1	10.8	chr6	31692511	31692760	(139113219)	C	MIRb	SINE/MIR	(16)	252	5	3363726
804	17.9	6.6	0.6	chr6	31736956	31737112	(139068867)	C	L1M1	LINE/L1	(6890)	675	509	3363797
216	25.9	13.5	9.8	chr6	31739054	31739111	(139066868)	+	L2c	LINE/L2	3257	3303	(123)	3363799
46	0.0	0.0	0.0	chr6	31739112	31739150	(139066829)	+	(AC)n	Simple_repeat	1	39	(0)	3363800
242	25.9	13.5	9.8	chr6	31739151	31739254	(139066725)	+	L2c	LINE/L2	3289	3426	(0)	3363799
283	20.6	0.0	2.9	chr6	31739518	31739587	(139066392)	C	MIR	SINE/MIR	(6)	256	189	3363801
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
2112	12.6	0.0	1.3	chr6	31813306	31813607	(138992372)	C	AluSz	SINE/Alu	(14)	298	1	3363945
1807	17.6	8.4	2.7	chr6	31813608	31813713	(138992266)	C	L1MB2	LINE/L1	(391)	5780	5661	3363943
1638	6.5	0.0	5.6	chr6	31814127	31814357	(138991622)	+	AluY	SINE/Alu	1	218	(93)	3363946
15	19.7	0.0	0.0	chr6	31822101	31822129	(138983850)	+	(C)n	Simple_repeat	1	29	(0)	3363956
24	23.9	3.8	1.2	chr6	31897640	31897719	(138908260)	+	(GCC)n	Simple_repeat	1	83	(0)	3364122
386	30.8	10.7	0.0	chr6	32113840	32113998	(138691981)	C	MIRb	SINE/MIR	(76)	192	15	3364404
2105	8.5	8.8	0.7	chr6	32114446	32114728	(138691251)	+	AluSx4	SINE/Alu	2	309	(1)	3364405
1823	6.2	8.3	0.0	chr6	32130742	32130983	(138674996)	+	AluSq2	SINE/Alu	1	264	(49)	3364428
2074	8.1	0.4	0.7	chr6	32130988	32131259	(138674720)	+	AluSc5	SINE/Alu	36	306	(3)	3364429
336	4.9	0.0	0.0	chr6	32131270	32131310	(138674669)	+	AluYk11	SINE/Alu	15	55	(256)	3364430
20	13.7	0.0	0.0	chr6	32131312	32131343	(138674636)	+	(G)n	Simple_repeat	1	32	(0)	3364431
1943	9.3	0.0	0.4	chr6	32131345	32131602	(138674377)	+	AluSx1	SINE/Alu	51	307	(5)	3364432
27	19.7	0.0	0.0	chr6	32151949	32152000	(138653979)	+	G-rich	Low_complexity	1	52	(0)	3364476
302	32.4	1.4	4.1	chr6	32155428	32155563	(138650416)	+	MIRc	SINE/MIR	11	143	(125)	3364478
49	5.7	0.0	0.0	chr6	32155564	32155618	(138650361)	+	(GT)n	Simple_repeat	1	55	(0)	3364479
16	23.5	0.0	0.0	chr6	32970868	32970899	(137835080)	+	G-rich	Low_complexity	1	32	(0)	3365687
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
25	20.6	0.0	3.1	chr6	33200310	33200374	(137605605)	+	(CCG)n	Simple_repeat	1	65	(0)	3365969
12	17.0	9.2	4.2	chr6	33204797	33204861	(137601118)	+	(CTCTGACC)n	Simple_repeat	1	71	(0)	3365972
16	26.1	4.6	3.3	chr6	33208607	33208693	(137597286)	+	(GGCGGC)n	Simple_repeat	1	91	(0)	3365977
356	30.6	10.5	5.3	chr6	33299810	33300131	(137505848)	C	L2b	LINE/L2	(7)	3380	3080	3366146
595	28.7	2.1	6.5	chr6	33300275	33300380	(137505599)	+	Charlie1	DNA/hAT-Charlie	5	99	(2682)	3366147
2545	4.8	0.0	0.0	chr6	33300381	33300675	(137505304)	+	AluY	SINE/Alu	2	296	(15)	3366148
20	2.5	9.5	2.2	chr6	33317743	33317784	(137488195)	+	(CCTCCG)n	Simple_repeat	1	46	(0)	3366188
1250	8.6	0.0	0.0	chr6	33345758	33345909	(137460070)	C	AluSx	SINE/Alu	(15)	297	146	3366261
15	4.2	4.0	0.0	chr6	33410885	33410909	(137395070)	+	(GAGGT)n	Simple_repeat	1	26	(0)	3366412
24	38.9	0.0	0.0	chr6	33410913	33411023	(137394956)	+	(CCC)n	Simple_repeat	1	111	(0)	3366413
13	25.5	0.0	0.0	chr6	33411014	33411050	(137394929)	+	(CTG)n	Simple_repeat	1	37	(0)	3366414
13	31.0	3.2	0.0	chr6	33411222	33411284	(137394695)	+	G-rich	Low_complexity	1	65	(0)	3366415
25	32.4	3.2	3.2	chr6	33420810	33420950	(137385029)	+	GA-rich	Low_complexity	1	141	(0)	3366424
17	29.4	3.1	1.5	chr6	33425578	33425642	(137380337)	+	GA-rich	Low_complexity	1	67	(0)	3366425
13	6.7	9.1	2.8	chr6	33425720	33425752	(137380227)	+	GA-rich	Low_complexity	1	36	(0)	3366426
14	13.0	6.5	4.1	chr6	33425973	33426018	(137379961)	+	G-rich	Low_complexity	1	49	(0)	3366427
24	26.4	1.2	2.4	chr6	33427858	33427938	(137378041)	+	(GGC)n	Simple_repeat	1	82	(0)	3366429
27	26.6	2.8	5.4	chr6	33428117	33428267	(137377712)	+	G-rich	Low_complexity	1	147	(0)	3366430
19	12.1	0.0	2.6	chr6	33433692	33433729	(137372250)	+	(GGCCGGG)n	Simple_repeat	1	38	(0)	3366435
12	34.3	0.0	6.0	chr6	33434003	33434086	(137371893)	+	(CTT)n	Simple_repeat	1	84	(0)	3366436
2249	9.0	1.0	1.0	chr6	33480484	33480784	(137325195)	+	AluSq2	SINE/Alu	2	302	(11)	3366529
1724	21.6	4.1	5.1	chr6	33480785	33481169	(137324810)	C	L1MA9	LINE/L1	(199)	6113	5755	3366528
1687	17.2	1.6	0.3	chr6	33481167	33481475	(137324504)	+	L1MA9	LINE/L1	5409	5721	(591)	3366528
13	29.3	3.5	0.0	chr6	33578856	33578913	(137227066)	+	(CCCAGCG)n	Simple_repeat	1	60	(0)	3366770
1908	8.6	0.0	0.0	chr6	33579130	33579363	(137226616)	+	AluSx	SINE/Alu	67	300	(12)	3366771
608	23.1	5.4	3.4	chr6	33619792	33620028	(137185951)	+	MER112	DNA/hAT-Charlie	5	246	(15)	3366868
28	0.0	0.0	0.0	chr6	33620109	33620135	(137185844)	+	(AAAC)n	Simple_repeat	1	27	(0)	3366869
13	8.5	4.0	0.0	chr6	33620136	33620160	(137185819)	+	(ACA)n	Simple_repeat	1	26	(0)	3366870
18	6.1	2.6	5.1	chr6	33621352	33621389	(137184590)	+	(CGGG)n	Simple_repeat	1	39	(0)	3366871
13	19.1	0.0	0.0	chr6	34142690	34142719	(136663260)	+	(TCGC)n	Simple_repeat	1	30	(0)	3367710
16	7.4	3.2	3.1	chr6	34142809	34142839	(136663140)	+	(GGA)n	Simple_repeat	1	32	(0)	3367711
291	25.6	11.3	5.7	chr6	34142950	34143090	(136662889)	+	MamTip2	DNA/hAT-Tip100	74	223	(82)	3367712
389	27.7	3.6	9.1	chr6	34224678	34224852	(136581127)	C	L2a	LINE/L2	(4)	3422	3258	3367907
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
215	18.0	3.8	2.0	chr6	34238432	34238482	(136567497)	+	MIR3	SINE/MIR	68	119	(89)	3367939
254	26.5	5.8	5.8	chr6	34243783	34243886	(136562093)	C	MIR3	SINE/MIR	(11)	197	94	3367945
39	27.9	2.1	2.0	chr6	34392500	34392642	(136413337)	+	(CCG)n	Simple_repeat	1	146	(0)	3368274
411	30.9	10.4	4.6	chr6	34562658	34562874	(136243105)	C	MIR	SINE/MIR	(24)	238	8	3368658
12	13.7	0.0	0.0	chr6	34696759	34696782	(136109197)	+	(ACTC)n	Simple_repeat	1	24	(0)	3368935
17	39.7	0.0	0.0	chr6	34696784	34696874	(136109105)	+	(CCC)n	Simple_repeat	1	91	(0)	3368936
189	27.6	20.4	1.9	chr6	34697704	34697810	(136108169)	C	MIRc	SINE/MIR	(119)	149	18	3368938
308	17.2	4.5	0.0	chr6	35184980	35185043	(135620936)	+	L2a	LINE/L2	3342	3408	(18)	3369873
12	14.4	0.0	0.0	chr6	35185054	35185077	(135620902)	+	(TTAA)n	Simple_repeat	1	24	(0)	3369874
298	32.5	6.8	4.7	chr6	35185790	35185990	(135619989)	+	MIRb	SINE/MIR	1	204	(64)	3369875
182	35.4	3.4	0.9	chr6	35185973	35186086	(135619893)	+	MamRTE1	LINE/RTE-BovB	2156	2272	(1540)	3369876
29	21.7	0.0	0.0	chr6	35217206	35217264	(135588715)	+	G-rich	Low_complexity	1	59	(0)	3369930
246	26.2	11.9	0.0	chr6	35453027	35453152	(135352827)	C	Charlie7	DNA/hAT-Charlie	(17)	2595	2453	3370413
784	25.4	13.5	2.5	chr6	35453202	35453608	(135352371)	C	Charlie7	DNA/hAT-Charlie	(1941)	671	213	3370414
11	13.2	5.7	2.7	chr6	35496605	35496639	(135309340)	+	(GGACAGG)n	Simple_repeat	1	37	(0)	3370489
16	15.9	0.0	0.0	chr6	35496685	35496712	(135309267)	+	G-rich	Low_complexity	1	28	(0)	3370490
16	8.3	0.0	0.0	chr6	35728127	35728152	(135077827)	+	(CGGG)n	Simple_repeat	1	26	(0)	3371015
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
200	23.1	9.7	1.5	chr6	35731260	35731325	(135074654)	+	L2c	LINE/L2	3353	3424	(2)	3371018
13	14.5	3.2	0.0	chr6	35731388	35731418	(135074561)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	3371021
19	25.7	4.9	1.2	chr6	35731935	35731962	(135074017)	+	(GGAGCG)n	Simple_repeat	1	83	(0)	3371022
13	31.6	0.0	0.0	chr6	35731963	35732013	(135073966)	+	G-rich	Low_complexity	1	51	(0)	3371023
624	23.9	6.3	3.6	chr6	36119355	36119601	(134686378)	+	L1ME3Cz	LINE/L1	321	574	(423)	3371825
431	27.1	8.9	5.9	chr6	36123588	36123892	(134682087)	C	L2b	LINE/L2	(5)	3421	3076	3371838
21	11.4	6.1	1.9	chr6	36124030	36124078	(134681901)	+	GA-rich	Low_complexity	1	52	(0)	3371839
23	23.9	0.0	1.5	chr6	36124085	36124118	(134681861)	+	(TTTC)n	Simple_repeat	1	33	(0)	3371840
38	0.0	0.0	0.0	chr6	36124119	36124153	(134681826)	+	(CCTC)n	Simple_repeat	1	35	(0)	3371841
2291	10.8	0.0	0.0	chr6	36124154	36124479	(134681500)	C	AluSq	SINE/Alu	(0)	313	2	3371842
884	20.8	7.7	2.8	chr6	36190653	36190899	(134615080)	C	L1ME1	LINE/L1	(9)	6170	5911	3371975
370	20.0	1.3	2.6	chr6	36191011	36191087	(134614892)	C	MER5A1	DNA/hAT-Charlie	(0)	166	91	3371976
440	17.2	4.9	9.4	chr6	36191654	36191781	(134614198)	+	LTR54	LTR/ERV1	62	183	(327)	3371977
341	26.6	14.4	6.0	chr6	36225665	36225848	(134580131)	C	MIRb	SINE/MIR	(48)	220	19	3372027
808	15.8	1.4	0.7	chr6	36440991	36441130	(134364849)	+	BC200	scRNA	7	147	(53)	3372524
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
2100	12.2	2.7	0.0	chr6	36543646	36543933	(134262046)	C	AluSx	SINE/Alu	(16)	296	1	3372730
1658	18.9	7.7	2.8	chr6	36595382	36595778	(134210201)	C	L1MB5	LINE/L1	(58)	6116	5699	3372885
2023	13.0	0.7	2.3	chr6	36597098	36597405	(134208574)	C	AluSx	SINE/Alu	(9)	303	1	3372887
919	25.6	7.4	0.0	chr6	36852286	36852523	(133953456)	C	MIR	SINE/MIR	(0)	262	6	3373440
450	22.0	9.6	2.0	chr6	36852877	36853029	(133952950)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	3373441
14	7.1	6.2	2.9	chr6	36960626	36960657	(133845322)	+	(CCCT)n	Simple_repeat	1	34	(0)	3373650
1846	10.4	3.5	5.7	chr6	37175979	37176275	(133629704)	C	AluSx1	SINE/Alu	(21)	291	2	3374142
2130	10.5	1.7	0.3	chr6	37176280	37176574	(133629405)	C	AluSz	SINE/Alu	(13)	299	1	3374143
378	26.9	1.4	9.6	chr6	37182951	37183106	(133622873)	C	MIR	SINE/MIR	(109)	159	17	3374165
43	0.0	0.0	0.0	chr6	37183685	37183721	(133622258)	+	(TA)n	Simple_repeat	1	37	(0)	3374169
2092	10.4	2.4	0.7	chr6	37183722	37184002	(133621977)	C	AluSq2	SINE/Alu	(26)	287	1	3374170
942	18.9	0.6	1.8	chr6	37243428	37243594	(133562385)	C	LTR8A	LTR/ERV1	(0)	820	656	3374330
1312	10.0	0.0	0.0	chr6	37243595	37243764	(133562215)	C	AluSp	SINE/Alu	(9)	304	135	3374331
2397	17.9	8.0	6.2	chr6	37243765	37244329	(133561650)	C	LTR8A	LTR/ERV1	(151)	576	1	3374330
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
239	25.8	13.6	0.0	chr6	37433820	37433908	(133372071)	+	MIR3	SINE/MIR	72	174	(34)	3374688
595	24.7	0.6	9.4	chr6	37637680	37637871	(133168108)	+	MIRb	SINE/MIR	94	268	(0)	3375046
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
126	6.5	5.1	0.0	chr6	37698157	37698352	(133107627)	+	(TC)n	Simple_repeat	1	206	(0)	3375153
203	20.4	8.5	0.0	chr6	37741384	37741437	(133064542)	+	MIR	SINE/MIR	204	262	(0)	3375251
1607	13.0	11.6	1.1	chr6	37741455	37741731	(133064248)	+	AluSz6	SINE/Alu	1	310	(2)	3375252
14	14.9	3.2	0.0	chr6	37741808	37741838	(133064141)	+	(TAT)n	Simple_repeat	1	32	(0)	3375253
22	9.8	0.0	2.9	chr6	38722574	38722608	(132083371)	+	(GT)n	Simple_repeat	1	35	(0)	3376864
504	18.1	4.1	0.0	chr6	39222685	39222778	(131583201)	C	L1M3	LINE/L1	(539)	5650	5553	3377676
1236	18.3	3.9	1.1	chr6	39222781	39223051	(131582928)	+	L1MB2	LINE/L1	5892	6170	(1)	3377677
12	25.3	2.4	0.0	chr6	39229797	39229838	(131576141)	+	(TTTATT)n	Simple_repeat	1	43	(0)	3377684
12	4.3	8.3	0.0	chr6	39230123	39230146	(131575833)	+	(TCTTT)n	Simple_repeat	1	26	(0)	3377685
187	35.3	10.8	5.9	chr6	39230149	39230172	(131575807)	+	L2a	LINE/L2	3071	3094	(281)	3377686
2389	7.8	0.7	0.0	chr6	39230173	39230467	(131575512)	C	AluSx	SINE/Alu	(15)	297	1	3377687
2682	10.9	2.9	3.1	chr6	39993176	39993620	(130812359)	C	HERV1_LTRe	LTR/ERV1	(0)	537	94	3378877
3160	25.1	1.4	0.8	chr6	39993652	39994366	(130811613)	C	HERV3-int	LTR/ERV1	(0)	8426	7708	3378878
2592	11.3	6.5	1.2	chr6	39999036	39999455	(130806524)	C	HERV1_LTRe	LTR/ERV1	(1)	536	93	3378878
404	29.3	6.0	6.0	chr6	41442605	41442804	(129363175)	+	MIRc	SINE/MIR	16	215	(53)	3381165
13	11.7	4.9	4.7	chr6	41443311	41443351	(129362628)	+	(CGCCGCCT)n	Simple_repeat	1	43	(0)	3381166
635	16.7	7.7	2.7	chr6	41603368	41603515	(129202464)	C	MIR	SINE/MIR	(0)	262	107	3381454
261	28.7	11.5	0.9	chr6	41681988	41682096	(129123883)	C	Charlie19a	DNA/hAT-Charlie	(44)	342	221	3381612
19	12.1	0.0	0.0	chr6	41682482	41682509	(129123470)	+	(T)n	Simple_repeat	1	28	(0)	3381613
13	11.6	0.0	6.2	chr6	41734758	41734789	(129071190)	+	GA-rich	Low_complexity	1	32	(0)	3381714
13	18.4	5.7	3.6	chr6	41780087	41780139	(129025840)	+	(GCGCGGAG)n	Simple_repeat	1	56	(0)	3381804
12	21.8	2.7	0.0	chr6	41780265	41780301	(129025678)	+	G-rich	Low_complexity	1	38	(0)	3381805
15	12.6	8.9	2.0	chr6	41786632	41786676	(129019303)	+	(CGG)n	Simple_repeat	1	49	(0)	3381816
184	25.8	16.0	0.0	chr6	41846415	41846503	(128959476)	+	L2a	LINE/L2	3321	3426	(0)	3381939
1875	25.9	8.7	3.8	chr6	41846584	41847435	(128958544)	+	L1MB2	LINE/L1	830	1919	(4744)	3381938
2091	10.7	0.0	0.0	chr6	42092417	42092707	(128713272)	C	AluSz6	SINE/Alu	(10)	302	12	3382513
864	21.1	6.4	4.7	chr6	42093072	42093285	(128712694)	C	MER20	DNA/hAT-Charlie	(0)	219	2	3382514
17	16.8	2.3	2.3	chr6	42261016	42261058	(128544921)	+	(ACCCCC)n	Simple_repeat	1	44	(0)	3382888
194	25.0	16.3	1.2	chr6	42261464	42261557	(128544422)	+	MER5A	DNA/hAT-Charlie	72	178	(0)	3382889
444	32.4	16.7	3.8	chr6	42755974	42756629	(128049350)	+	L2b	LINE/L2	1714	2476	(943)	3383952
355	19.6	6.8	6.0	chr6	42756658	42756847	(128049132)	C	MLT1H	LTR/ERVL-MaLR	(1)	488	254	3383954
36	2.9	0.0	0.0	chr6	42756886	42756920	(128049059)	+	(CT)n	Simple_repeat	1	35	(0)	3383955
15	18.1	0.0	0.0	chr6	42756921	42756952	(128049027)	+	(CCTC)n	Simple_repeat	1	32	(0)	3383956
764	26.0	8.9	3.3	chr6	42756955	42757228	(128048751)	C	MLT1H	LTR/ERVL-MaLR	(256)	293	3	3383954
2322	8.8	0.0	1.3	chr6	42757245	42757550	(128048429)	C	AluYm1	SINE/Alu	(8)	303	2	3383957
18	7.1	8.3	3.9	chr6	42782343	42782390	(128023589)	+	G-rich	Low_complexity	1	52	(0)	3384023
18	29.7	0.0	1.5	chr6	42782599	42782665	(128023314)	+	G-rich	Low_complexity	1	67	(0)	3384024
13	16.4	8.6	3.2	chr6	42783234	42783291	(128022688)	+	(CCGCGG)n	Simple_repeat	1	63	(0)	3384027
2166	10.2	0.0	0.0	chr6	42927994	42928286	(127877693)	C	AluSx3	SINE/Alu	(18)	293	1	3384359
1182	17.9	10.3	3.9	chr6	42928292	42928571	(127877408)	C	AluJo	SINE/Alu	(0)	312	13	3384360
226	29.8	9.0	7.6	chr6	42928608	42928738	(127877241)	C	L2b	LINE/L2	(20)	3406	3253	3384355
1692	16.8	0.7	4.3	chr6	42980089	42980257	(127825722)	C	AluJb	SINE/Alu	(16)	296	138	3384466
13	11.7	3.6	0.0	chr6	43021024	43021051	(127784928)	+	G-rich	Low_complexity	1	29	(0)	3384538
245	35.8	0.0	2.1	chr6	43054011	43054107	(127751872)	C	MIR3	SINE/MIR	(17)	191	97	3384600
22	23.3	0.0	0.0	chr6	43054173	43054218	(127751761)	+	A-rich	Low_complexity	1	46	(0)	3384601
925	10.2	0.8	0.8	chr6	43054670	43054796	(127751183)	+	AluJo	SINE/Alu	15	141	(171)	3384602
1802	14.8	4.1	0.0	chr6	43054797	43055074	(127750905)	+	AluJb	SINE/Alu	1	290	(22)	3384603
19	17.6	2.6	0.0	chr6	43142503	43142541	(127663438)	+	(GT)n	Simple_repeat	1	40	(0)	3384781
597	34.0	6.6	0.4	chr6	43182946	43183203	(127622776)	C	MIRb	SINE/MIR	(0)	268	3	3384873
30	26.8	4.2	1.6	chr6	43369433	43369552	(127436427)	+	(CGC)n	Simple_repeat	1	125	(0)	3385201
16	16.5	0.0	0.0	chr6	43455623	43455649	(127350330)	+	(C)n	Simple_repeat	1	27	(0)	3385385
2069	10.7	0.3	0.0	chr6	43618636	43618925	(127187054)	C	AluSz	SINE/Alu	(16)	296	6	3385699
1655	18.1	4.2	0.3	chr6	43619096	43619394	(127186585)	+	AluJb	SINE/Alu	2	312	(0)	3385700
238	27.0	18.4	2.6	chr6	43619401	43619514	(127186465)	+	L2c	LINE/L2	3252	3387	(0)	3385701
502	29.0	8.0	5.2	chr6	43635317	43635607	(127170372)	+	L2b	LINE/L2	3076	3375	(0)	3385717
333	31.0	13.9	3.0	chr6	43723459	43723694	(127082285)	+	MIRb	SINE/MIR	2	267	(1)	3385901
327	14.0	3.8	0.0	chr6	43738088	43738692	(127067287)	+	(TG)n	Simple_repeat	1	628	(0)	3385932
246	28.1	0.0	1.5	chr6	43738871	43738935	(127067044)	C	MER102b	DNA/hAT-Charlie	(3)	338	275	3385933
16	12.7	0.0	5.3	chr6	43770122	43770159	(127035820)	+	G-rich	Low_complexity	1	38	(0)	3385988
786	19.2	5.5	0.0	chr6	43832195	43832350	(126973629)	C	MER6B	DNA/TcMar-Tigger	(0)	210	46	3386092
320	29.5	10.4	2.1	chr6	43832363	43832553	(126973426)	C	L2c	LINE/L2	(177)	3210	3011	3386091
388	24.8	9.4	1.4	chr6	43832798	43832944	(126973035)	+	Charlie7a	DNA/hAT-Charlie	113	272	(0)	3386093
239	32.2	13.1	1.1	chr6	43904134	43904321	(126901658)	C	L3	LINE/CR1	(8)	4091	3878	3386221
413	28.4	11.4	6.3	chr6	43904436	43904642	(126901337)	C	MIRb	SINE/MIR	(13)	255	37	3386222
189	28.1	0.0	12.8	chr6	44004878	44004971	(126801008)	+	L2c	LINE/L2	3269	3350	(37)	3386396
11	17.8	0.0	10.9	chr6	44005173	44005227	(126800752)	+	G-rich	Low_complexity	1	55	(0)	3386397
20	21.1	0.0	0.0	chr6	44127515	44127553	(126678426)	+	(C)n	Simple_repeat	1	39	(0)	3386612
16	20.8	0.0	0.0	chr6	44127606	44127638	(126678341)	+	(C)n	Simple_repeat	1	33	(0)	3386612
270	30.6	8.6	4.0	chr6	44238177	44238322	(126567657)	+	MIRc	SINE/MIR	75	222	(46)	3386833
273	25.2	8.6	5.2	chr6	44238317	44238450	(126567529)	C	MIRb	SINE/MIR	(23)	245	107	3386834
194	36.1	7.7	0.9	chr6	44238385	44238493	(126567486)	+	MIRc	SINE/MIR	137	253	(15)	3386835
17	10.5	6.5	0.0	chr6	44238501	44238531	(126567448)	+	(TC)n	Simple_repeat	1	33	(0)	3386836
19	0.0	0.0	0.0	chr6	44257013	44257033	(126548946)	+	(CT)n	Simple_repeat	1	21	(0)	3386858
30	3.1	0.0	0.0	chr6	44265758	44265790	(126540189)	+	(ATTC)n	Simple_repeat	1	33	(0)	3386871
1727	10.7	12.6	0.7	chr6	44265873	44266144	(126539835)	C	AluSz	SINE/Alu	(1)	311	3	3386872
20	18.4	0.0	0.0	chr6	44388135	44388171	(126417808)	+	(C)n	Simple_repeat	1	37	(0)	3387105
294	16.9	4.6	9.8	chr6	44482541	44482632	(126323347)	+	MER53	DNA/hAT	17	103	(90)	3387269
352	13.9	5.3	5.3	chr6	44482558	44482633	(126323346)	C	MER53	DNA/hAT	(21)	172	97	3387270
196	23.9	4.2	2.1	chr6	44482868	44482914	(126323065)	C	MIRb	SINE/MIR	(10)	258	211	3387271
263	28.6	3.9	0.0	chr6	49532341	49532439	(121273540)	C	L1ME4c	LINE/L1	(438)	5686	5602	3394498
30	19.7	0.0	0.0	chr6	49532524	49532581	(121273398)	+	(T)n	Simple_repeat	1	58	(0)	3394499
2348	9.9	0.0	0.0	chr6	49532584	49532876	(121273103)	C	AluSc5	SINE/Alu	(16)	293	1	3394500
1593	31.3	8.7	9.8	chr6	49782394	49782980	(121022999)	+	MLT1J-int	LTR/ERVL-MaLR	24	582	(805)	3394893
2125	12.2	0.3	0.0	chr6	49782981	49783267	(121022712)	+	AluSx	SINE/Alu	14	301	(11)	3394895
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
2647	11.9	2.8	5.9	chr6	82894153	82894627	(87911352)	+	LTR46	LTR/ERV1	1	460	(0)	3435763
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
3400	14.4	7.4	2.6	chr6	89072858	89073477	(81732502)	+	MER61F	LTR/ERV1	1	652	(24)	3444118
16	18.6	1.6	7.7	chr6	89080343	89080406	(81725573)	+	(TCCCCC)n	Simple_repeat	1	65	(0)	3444133
13	21.1	2.6	0.0	chr6	89081020	89081057	(81724922)	+	(ACCCCGG)n	Simple_repeat	1	39	(0)	3444134
19	21.7	0.0	0.0	chr6	89081515	89081552	(81724427)	+	G-rich	Low_complexity	1	38	(0)	3444135
424	23.2	13.5	0.7	chr6	90185344	90185621	(80620358)	+	L1ME4a	LINE/L1	5801	6119	(5)	3446009
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
17	14.1	5.1	0.0	chr6	98834764	98834802	(71971177)	+	GA-rich	Low_complexity	1	41	(0)	3456775
13	11.2	4.5	6.5	chr6	99520982	99521025	(71284954)	+	(GCCGGAG)n	Simple_repeat	1	46	(0)	3457774
17	13.2	0.0	2.9	chr6	99521007	99521041	(71284938)	+	GA-rich	Low_complexity	1	35	(0)	3457775
209	21.1	3.4	1.7	chr6	99521599	99521656	(71284323)	C	MIR3	SINE/MIR	(60)	148	90	3457776
14	20.5	2.6	0.0	chr6	107114957	107114995	(63690984)	+	(CCCCCT)n	Simple_repeat	1	40	(0)	3468217
17	15.4	4.4	2.1	chr6	107115023	107115067	(63690912)	+	(GCC)n	Simple_repeat	1	47	(0)	3468218
16	23.3	0.0	0.0	chr6	107115364	107115398	(63690581)	+	(C)n	Simple_repeat	1	35	(0)	3468219
267	28.3	0.0	0.0	chr6	109185751	109185810	(61620169)	C	L2b	LINE/L2	(7)	3368	3309	3471795
184	28.3	1.9	1.9	chr6	109185974	109186027	(61619952)	+	L2c	LINE/L2	3334	3387	(0)	3471796
14	21.1	6.1	0.0	chr6	109186028	109186076	(61619903)	+	(GAAT)n	Simple_repeat	1	52	(0)	3471797
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
13	10.0	0.0	0.0	chr6	110875023	110875044	(59930935)	+	(GCG)n	Simple_repeat	1	22	(0)	3474524
852	29.4	14.5	0.0	chr6	111478894	111479199	(59326780)	+	Tigger19b	DNA/TcMar-Tigger	92	449	(101)	3475660
1939	13.0	3.3	3.6	chr6	111479510	111479810	(59326169)	C	AluJo	SINE/Alu	(12)	300	1	3475661
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
2498	2.9	1.0	2.6	chr6	111606275	111606582	(59199397)	+	AluY	SINE/Alu	2	304	(7)	3475907
20	17.8	0.0	0.0	chr6	111606736	111606775	(59199204)	+	(ACAC)n	Simple_repeat	1	40	(0)	3475908
2127	9.0	5.1	0.4	chr6	112347709	112347987	(58457992)	+	AluSg	SINE/Alu	1	293	(17)	3476999
378	25.5	2.5	4.3	chr6	112348031	112348194	(58457785)	C	L1ME4c	LINE/L1	(289)	541	381	3477000
1634	17.0	12.7	8.9	chr6	116280941	116281424	(54524555)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3482347
2255	8.7	1.4	2.7	chr6	118612376	118612674	(52193305)	+	AluY	SINE/Alu	1	295	(16)	3485393
8562	17.5	5.3	6.2	chr6	118612675	118612936	(52193043)	+	L1MD1	LINE/L1	3425	3677	(2860)	3485392
2333	7.8	2.7	0.0	chr6	118612937	118613229	(52192750)	+	AluSq	SINE/Alu	1	301	(12)	3485394
22	0.0	0.0	0.0	chr6	118709533	118709556	(52096423)	+	(GT)n	Simple_repeat	1	24	(0)	3485554
31	0.0	0.0	0.0	chr6	118709557	118709583	(52096396)	+	(GA)n	Simple_repeat	1	27	(0)	3485555
549	17.5	3.6	2.4	chr6	118710726	118710848	(52095131)	C	L2a	LINE/L2	(1)	3425	3276	3485556
2313	15.4	4.4	1.9	chr6	119324073	119324495	(51481484)	+	Tigger2a	DNA/TcMar-Tigger	1	434	(0)	3486460
644	25.5	4.2	4.6	chr6	119324815	119325032	(51480947)	C	MER20	DNA/hAT-Charlie	(2)	217	1	3486461
789	26.3	6.2	4.3	chr6	119325056	119325309	(51480670)	C	MIR	SINE/MIR	(0)	262	4	3486462
18	7.0	0.0	3.1	chr6	121334481	121334521	(49471458)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	3488811
3545	10.8	10.8	0.5	chr6	122438376	122438981	(48366998)	+	L1PA14	LINE/L1	1595	2270	(4419)	3490412
4102	17.8	8.9	1.3	chr6	122438982	122439818	(48366161)	+	MSTA-int	LTR/ERVL-MaLR	745	1651	(0)	3490411
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
389	25.9	7.5	11.2	chr6	130202623	130202774	(40603205)	+	MER103C	DNA/hAT-Charlie	94	239	(58)	3500577
15	21.1	2.2	2.1	chr6	132814792	132814837	(37991142)	+	G-rich	Low_complexity	1	47	(0)	3504376
568	14.7	0.0	5.2	chr6	134416340	134416444	(36389535)	C	FLAM_C	SINE/Alu	(1)	132	39	3506868
216	26.8	7.9	0.0	chr6	135499406	135499487	(35306492)	C	MIR	SINE/MIR	(0)	262	174	3508542
348	31.8	8.1	5.1	chr6	135499652	135499895	(35306084)	C	L2b	LINE/L2	(222)	3165	2925	3508543
474	38.3	0.4	0.0	chr6	135500003	135500237	(35305742)	C	L2	LINE/L2	(639)	2780	2545	3508544
433	21.3	5.4	4.1	chr6	135925900	135926046	(34879933)	C	MER39	LTR/ERV1	(0)	707	559	3509136
2444	6.4	0.0	0.4	chr6	135926105	135926385	(34879594)	C	AluY	SINE/Alu	(30)	281	2	3509137
704	24.2	4.3	7.6	chr6	135926386	135926670	(34879309)	C	MER39	LTR/ERV1	(165)	542	267	3509136
242	24.6	9.8	4.3	chr6	135926646	135926760	(34879219)	C	LTR48B	LTR/ERV1	(519)	125	4	3509138
14881	7.9	0.7	1.0	chr6	136223991	136225469	(34580510)	+	L1PA8A	LINE/L1	4636	6118	(13)	3509535
1770	12.7	0.3	1.3	chr6	136225479	136225763	(34580216)	C	THE1B	LTR/ERVL-MaLR	(25)	403	57	3509538
1319	30.5	9.0	5.7	chr6	136348035	136348835	(34457144)	+	MamRep1527	LTR	48	877	(92)	3509744
1718	18.0	21.2	11.2	chr6	136351708	136352190	(34453789)	+	LTR41	LTR/ERVL	1	620	(148)	3509751
1947	14.9	1.7	0.3	chr6	136352191	136352485	(34453494)	C	AluJb	SINE/Alu	(13)	299	1	3509752
19	11.2	0.0	0.0	chr6	136547817	136547845	(34258134)	+	(AC)n	Simple_repeat	1	29	(0)	3510051
15	13.3	7.0	2.2	chr6	136548076	136548081	(34257898)	+	(CCA)n	Simple_repeat	1	42	(0)	3510052
16	21.3	0.0	0.0	chr6	136548082	136548114	(34257865)	+	(C)n	Simple_repeat	1	33	(0)	3510053
852	23.6	3.1	1.4	chr6	137314061	137314283	(33491696)	+	MIR	SINE/MIR	33	259	(3)	3511309
294	20.5	0.0	7.1	chr6	137866073	137866156	(32939823)	C	MER94B	DNA/hAT-Blackjack	(10)	123	46	3512113
190	19.6	2.1	4.2	chr6	137918563	137918610	(32887369)	+	MIRb	SINE/MIR	222	268	(0)	3512187
957	18.4	0.5	7.2	chr6	137918684	137918918	(32887061)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3512188
61	1.3	5.1	1.2	chr6	137919191	137919268	(32886711)	+	(TTTC)n	Simple_repeat	1	82	(0)	3512189
13	22.8	5.9	0.0	chr6	138773803	138773853	(32032126)	+	(GGCTGT)n	Simple_repeat	1	54	(0)	3513523
16	13.2	0.0	0.0	chr6	139372507	139372531	(31433448)	+	(G)n	Simple_repeat	1	25	(0)	3514553
12	20.0	0.0	0.0	chr6	139373808	139373836	(31432143)	+	(TGC)n	Simple_repeat	1	29	(0)	3514555
18	19.2	0.0	2.3	chr6	139474685	139474728	(31331251)	+	(TTTC)n	Simple_repeat	1	44	(0)	3514740
767	25.2	6.8	3.7	chr6	139517699	139517995	(31287984)	+	MARNA	DNA/TcMar-Mariner	263	569	(17)	3514813
33	0.0	0.0	0.0	chr6	139518314	139518341	(31287638)	+	(CA)n	Simple_repeat	1	28	(0)	3514814
2306	7.8	3.1	0.7	chr6	139518357	139518631	(31287348)	+	AluSx1	SINE/Alu	1	284	(28)	3514815
34	2.5	2.5	0.0	chr6	139518632	139518671	(31287308)	+	(AAAC)n	Simple_repeat	1	41	(0)	3514816
24	26.9	0.0	0.0	chr6	139518687	139518748	(31287231)	+	(AC)n	Simple_repeat	1	62	(0)	3514817
13	17.1	2.3	4.5	chr6	139518788	139518830	(31287149)	+	(CTCCT)n	Simple_repeat	1	44	(0)	3514818
196	30.0	6.2	0.0	chr6	139534688	139534747	(31271232)	+	L2c	LINE/L2	3323	3386	(1)	3514847
361	34.0	7.1	2.4	chr6	139927101	139927282	(30878697)	C	MIRc	SINE/MIR	(21)	187	2	3515421
273	32.7	2.7	3.6	chr6	139927337	139927447	(30878532)	+	L2a	LINE/L2	3316	3425	(1)	3515422
628	33.2	11.5	5.5	chr6	143964545	143965292	(26840687)	+	MamGyp-int	LTR/Gypsy	29	827	(4276)	3520629
523	21.6	3.2	1.9	chr6	143976849	143977004	(26828975)	C	L1M4	LINE/L1	(3089)	3057	2900	3520643
1458	13.5	18.6	1.1	chr6	143977002	143977439	(26828540)	C	L1MC1	LINE/L1	(0)	6333	5819	3520644
6917	16.8	5.9	0.0	chr6	145787342	145788474	(25017505)	+	ERVL-int	LTR/ERVL	4482	5757	(0)	3523187
279	30.8	8.6	0.8	chr6	146544487	146544604	(24261375)	C	MIRc	SINE/MIR	(139)	129	2	3524170
17	12.5	0.0	0.0	chr6	146544764	146544789	(24261190)	+	(C)n	Simple_repeat	1	26	(0)	3524171
1873	14.6	2.0	1.0	chr6	146544961	146545081	(24260898)	+	AluJo	SINE/Alu	2	122	(190)	3524172
2593	8.2	0.0	0.0	chr6	146856727	146857069	(23948910)	+	L1PA6	LINE/L1	5809	6151	(3)	3524601
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
16	32.6	0.0	0.0	chr6	149317603	149317663	(21488316)	+	G-rich	Low_complexity	1	61	(0)	3528246
56	30.4	1.3	2.6	chr6	149317784	149317804	(21488175)	+	(GCG)n	Simple_repeat	1	27	(203)	3528247
13	20.7	1.8	6.9	chr6	149317805	149317861	(21488118)	+	GA-rich	Low_complexity	1	58	(0)	3528248
56	30.4	1.3	2.6	chr6	149317862	149318010	(21487969)	+	(GCG)n	Simple_repeat	28	230	(0)	3528247
19	8.1	0.0	0.0	chr6	150168151	150168176	(20637803)	+	(T)n	Simple_repeat	1	26	(0)	3529786
914	22.1	11.5	4.5	chr6	150168193	150168254	(20637725)	C	MER63B	DNA/hAT-Blackjack	(0)	436	387	3529787
2421	3.9	1.1	0.4	chr6	150168255	150168533	(20637446)	+	AluYk3	SINE/Alu	1	281	(30)	3529788
235	27.5	10.7	1.8	chr6	150271358	150271468	(20534511)	C	LTR67B	LTR/ERVL	(174)	446	325	3529949
3086	17.4	2.8	0.8	chr6	150271671	150272203	(20533776)	C	LTR75_1	LTR/ERV1	(0)	546	3	3529950
2479	6.8	0.0	1.3	chr6	150817555	150817861	(19988118)	C	AluSx1	SINE/Alu	(9)	303	1	3530805
259	25.2	3.5	10.5	chr6	150817862	150817903	(19988076)	C	MER5A	DNA/hAT-Charlie	(113)	76	36	3530804
4582	10.1	1.4	0.2	chr6	151229099	151229724	(19576255)	+	MER41B	LTR/ERV1	1	634	(0)	3531619
1590	16.2	0.7	6.2	chr6	151229725	151229816	(19576163)	C	AluJb	SINE/Alu	(212)	100	11	3531618
14	4.3	0.0	7.1	chr6	151229879	151229906	(19576073)	+	(AAAC)n	Simple_repeat	1	28	(0)	3531620
1706	17.5	0.7	2.0	chr6	151230470	151230601	(19575378)	+	AluJb	SINE/Alu	1	133	(179)	3531621
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
28	19.6	2.0	6.9	chr6	151391701	151391800	(19414179)	+	(GCC)n	Simple_repeat	1	102	(0)	3531915
18	4.7	0.0	0.0	chr6	152978378	152978399	(17827580)	+	(G)n	Simple_repeat	1	22	(0)	3534283
1925	16.7	0.3	1.3	chr6	152978711	152979016	(17826963)	+	AluJo	SINE/Alu	6	308	(4)	3534284
13	18.2	3.5	6.8	chr6	154733522	154733578	(16072401)	+	G-rich	Low_complexity	1	59	(0)	3536959
20	20.5	3.6	0.0	chr6	156777192	156777247	(14028732)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	3539992
12	24.3	0.0	0.0	chr6	156777641	156777674	(14028305)	+	(CCCGC)n	Simple_repeat	1	34	(0)	3539993
63	22.7	2.0	3.9	chr6	156777683	156777881	(14028098)	+	(GGC)n	Simple_repeat	1	203	(0)	3539994
13	16.8	2.2	6.4	chr6	156779480	156779525	(14026454)	+	(CGCGC)n	Simple_repeat	1	47	(0)	3540003
20	22.5	0.0	6.6	chr6	156779625	156779700	(14026279)	+	(GCCGG)n	Simple_repeat	1	76	(0)	3540004
11	17.4	0.0	5.6	chr6	156779710	156779745	(14026234)	+	(CCCCGC)n	Simple_repeat	1	36	(0)	3540005
2299	9.1	0.7	1.0	chr6	157122685	157122981	(13682998)	C	AluSx	SINE/Alu	(16)	296	1	3540448
190	26.7	3.4	5.5	chr6	157123046	157123136	(13682843)	C	L2c	LINE/L2	(1)	3386	3298	3540449
23	18.9	0.0	0.0	chr6	157123177	157123224	(13682755)	+	(TCTC)n	Simple_repeat	1	48	(0)	3540450
18	8.5	0.0	0.0	chr6	157123224	157123248	(13682731)	+	(C)n	Simple_repeat	1	25	(0)	3540451
431	29.2	6.7	1.3	chr6	157123259	157123414	(13682565)	C	L4_B_Mam	LINE/RTE-X	(3509)	1432	1268	3540447
40	0.0	0.0	0.0	chr6	157257253	157257286	(13548693)	+	(AC)n	Simple_repeat	1	34	(0)	3540617
17	13.1	0.0	0.0	chr6	157257304	157257329	(13548650)	+	(GA)n	Simple_repeat	1	26	(0)	3540618
29	0.0	0.0	0.0	chr6	157257737	157257761	(13548218)	+	(AC)n	Simple_repeat	1	25	(0)	3540619
390	15.7	4.1	0.0	chr6	157272464	157272533	(13533446)	C	MER5B	DNA/hAT-Charlie	(101)	77	5	3540650
255	32.5	12.4	2.4	chr6	157272551	157272717	(13533262)	+	MIRc	SINE/MIR	36	221	(47)	3540651
2595	4.5	0.0	1.3	chr6	157515452	157515764	(13290215)	C	AluY	SINE/Alu	(2)	309	1	3541040
1205	26.0	8.6	2.1	chr6	157515858	157516325	(13289654)	C	L1ME3A	LINE/L1	(1)	6172	5672	3541041
393	32.9	9.6	6.3	chr6	157773402	157773991	(13031988)	C	L2	LINE/L2	(449)	2970	2359	3541444
11	20.2	2.9	0.0	chr6	157774111	157774144	(13031835)	+	(AGAGGC)n	Simple_repeat	1	35	(0)	3541445
40	1.8	1.6	6.2	chr6	157774218	157774280	(13031699)	+	(GGAGTGGA)n	Simple_repeat	1	64	(0)	3541446
234	23.6	3.3	8.2	chr6	157874176	157874272	(12931707)	C	Charlie4z	DNA/hAT-Charlie	(20)	147	56	3541622
19	17.9	0.0	4.2	chr6	157981785	157981832	(12824147)	+	GA-rich	Low_complexity	1	48	(0)	3541773
1564	18.7	0.7	2.5	chr6	158496866	158497148	(12308831)	C	AluJr	SINE/Alu	(30)	282	5	3542628
3171	14.5	3.6	4.6	chr6	158611716	158612301	(12193678)	C	LTR19B	LTR/ERV1	(0)	580	1	3542832
19	22.3	3.0	2.9	chr6	158715602	158715667	(12090312)	+	(CACC)n	Simple_repeat	1	68	(0)	3542999
17	7.3	0.0	3.2	chr6	158818324	158818354	(11987625)	+	(GGGCC)n	Simple_repeat	1	31	(0)	3543165
11	27.7	0.0	0.0	chr6	158818711	158818749	(11987230)	+	G-rich	Low_complexity	1	39	(0)	3543166
13	15.7	0.0	7.3	chr6	158818816	158818856	(11987123)	+	G-rich	Low_complexity	1	41	(0)	3543167
16	27.2	1.9	0.0	chr6	159693167	159693219	(11112760)	+	(TGC)n	Simple_repeat	1	54	(0)	3544446
26	9.9	5.4	1.7	chr6	159693321	159693376	(11112603)	+	(CCGCC)n	Simple_repeat	1	59	(0)	3544447
15	15.6	2.8	0.0	chr6	159969015	159969050	(10836929)	+	G-rich	Low_complexity	1	37	(0)	3544915
14	24.5	2.0	2.0	chr6	159969049	159969098	(10836881)	+	(GCTGTC)n	Simple_repeat	1	51	(0)	3544916
13	19.9	2.4	2.3	chr6	159969113	159969154	(10836825)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	3544917
766	15.0	3.8	0.0	chr6	159989603	159989729	(10816250)	C	AluJr	SINE/Alu	(180)	132	1	3544946
16	9.3	0.0	0.0	chr6	163416049	163416075	(7389904)	+	(G)n	Simple_repeat	1	27	(0)	3549423
308	27.2	36.3	3.0	chr6	164347000	164347134	(6458845)	C	MamRep38	DNA/hAT	(29)	266	87	3550662
2117	14.2	0.7	0.0	chr6	164370183	164370478	(6435501)	+	AluSx1	SINE/Alu	1	298	(14)	3550690
3269	11.2	1.2	3.5	chr6	164370479	164370572	(6435407)	+	MER75	DNA/PiggyBac	425	504	(10)	3550689
666	26.5	3.1	9.3	chr6	164370883	164371086	(6434893)	+	LTR16A1	LTR/ERVL	19	209	(247)	3550691
194	29.1	8.3	6.0	chr6	164371308	164371424	(6434555)	+	L2a	LINE/L2	3304	3423	(3)	3550692
328	28.8	12.8	4.1	chr6	166313294	166313463	(4492516)	C	MIR	SINE/MIR	(53)	209	23	3553096
550	17.6	18.6	1.0	chr6	166313485	166313691	(4492288)	C	Charlie1b	DNA/hAT-Charlie	(4)	519	268	3553097
18	17.6	0.0	0.0	chr6	166681665	166681711	(4124268)	+	(C)n	Simple_repeat	1	47	(0)	3553524
310	33.0	9.3	7.4	chr6	166957417	166957859	(3848120)	+	L2a	LINE/L2	2936	3423	(3)	3553814
213	32.0	2.3	4.6	chr6	168035740	168035870	(2770109)	+	MIRc	SINE/MIR	24	151	(117)	3555076
18	12.2	0.0	0.0	chr6	168274079	168274105	(2531874)	+	(G)n	Simple_repeat	1	27	(0)	3555325
11	18.7	4.3	4.2	chr6	169724154	169724199	(1081780)	+	G-rich	Low_complexity	1	48	(0)	3556770
330	30.6	9.8	4.2	chr7	499615	499805	(158846168)	+	MLT1J	LTR/ERVL-MaLR	107	309	(203)	3558419
52	26.9	3.8	5.0	chr7	519432	519719	(158826254)	+	(CCGCCGC)n	Simple_repeat	1	299	(0)	3558445
14	11.7	3.6	0.0	chr7	519776	519803	(158826170)	+	GA-rich	Low_complexity	1	29	(0)	3558446
31	7.8	3.6	1.7	chr7	519881	519936	(158826037)	+	(CCGCCC)n	Simple_repeat	1	58	(0)	3558447
12	14.6	0.0	5.9	chr7	604847	604880	(158741093)	+	GA-rich	Low_complexity	1	34	(0)	3558562
16	9.8	0.0	0.0	chr7	1418726	1418747	(157927226)	+	(C)n	Simple_repeat	1	22	(0)	3559881
15	19.7	0.0	0.0	chr7	1498931	1498959	(157847014)	+	(C)n	Simple_repeat	1	29	(0)	3559976
17	3.7	3.3	3.2	chr7	1666044	1666073	(157679900)	+	(GGA)n	Simple_repeat	1	31	(0)	3560282
16	0.0	0.0	0.0	chr7	1666075	1666094	(157679879)	+	(GCC)n	Simple_repeat	1	20	(0)	3560283
359	28.1	9.7	0.4	chr7	2019411	2019592	(157326381)	+	MIRb	SINE/MIR	36	240	(22)	3560716
32	16.5	4.8	4.6	chr7	2019650	2019753	(157326220)	+	(CCACG)n	Simple_repeat	1	109	(0)	3560717
198	20.8	13.5	0.0	chr7	2559782	2559858	(156786115)	C	L2a	LINE/L2	(123)	3303	3215	3561638
1588	13.4	2.2	5.3	chr7	2559866	2560148	(156785825)	+	AluJr	SINE/Alu	1	274	(38)	3561639
869	23.8	2.3	0.5	chr7	4103832	4104046	(155241927)	C	MER58A	DNA/hAT-Charlie	(0)	224	6	3564255
1882	8.5	0.0	0.4	chr7	5365788	5366023	(153979950)	+	AluSp	SINE/Alu	1	235	(78)	3566858
665	19.9	7.1	3.9	chr7	5366091	5366294	(153979679)	C	MER20	DNA/hAT-Charlie	(2)	217	7	3566859
2056	11.2	1.8	0.0	chr7	5366319	5366623	(153979350)	C	AluSz	SINE/Alu	(0)	312	1	3566860
13	23.9	4.1	0.0	chr7	5422600	5422648	(153923325)	+	(CCGGCGC)n	Simple_repeat	1	51	(0)	3566995
16	0.0	0.0	0.0	chr7	5423835	5423851	(153922122)	+	(A)n	Simple_repeat	1	17	(0)	3566997
13	18.4	7.0	0.0	chr7	5423924	5423966	(153922007)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3566998
18	25.1	1.4	5.3	chr7	5424138	5424160	(153921813)	+	(CCT)n	Simple_repeat	1	73	(0)	3566999
13	20.7	6.1	1.9	chr7	5424161	5424209	(153921764)	+	(CCCT)n	Simple_repeat	1	52	(0)	3567000
14	23.8	0.0	2.2	chr7	5424357	5424402	(153921571)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3567001
15	16.7	5.0	0.0	chr7	5427077	5427116	(153918857)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	3567002
31	0.0	0.0	0.0	chr7	5427180	5427206	(153918767)	+	(GT)n	Simple_repeat	1	27	(0)	3567003
15	0.0	0.0	0.0	chr7	5427207	5427222	(153918751)	+	(GC)n	Simple_repeat	1	16	(0)	3567004
16	9.3	0.0	0.0	chr7	5427222	5427244	(153918729)	+	(GT)n	Simple_repeat	1	23	(0)	3567005
28	0.0	0.0	0.0	chr7	5428728	5428754	(153917219)	+	(T)n	Simple_repeat	1	27	(0)	3567006
893	14.6	0.0	0.0	chr7	5452887	5453016	(153892957)	C	FLAM_C	SINE/Alu	(13)	130	1	3567067
15	5.5	0.0	0.0	chr7	5453301	5453319	(153892654)	+	(T)n	Simple_repeat	1	19	(0)	3567068
1602	8.6	0.5	1.4	chr7	5458290	5458417	(153887556)	+	AluSz	SINE/Alu	8	135	(177)	3567079
2210	10.5	0.3	0.0	chr7	5458418	5458711	(153887262)	+	AluSg	SINE/Alu	1	295	(15)	3567080
1602	8.6	0.5	1.4	chr7	5458712	5458791	(153887182)	+	AluSz	SINE/Alu	136	214	(98)	3567079
46	0.0	0.0	0.0	chr7	5554790	5554828	(153791145)	+	(TG)n	Simple_repeat	1	39	(0)	3567324
15	23.5	0.0	6.5	chr7	5555179	5555240	(153790733)	+	(CCCGC)n	Simple_repeat	1	62	(0)	3567325
13	23.4	1.6	6.3	chr7	5555381	5555442	(153790531)	+	(CCCCGA)n	Simple_repeat	1	63	(0)	3567326
185	36.2	3.2	0.0	chr7	5555490	5555576	(153790397)	C	MIRc	SINE/MIR	(116)	152	59	3567315
290	25.9	3.2	3.5	chr7	5555734	5555854	(153790119)	+	MIR3	SINE/MIR	63	185	(83)	3567327
13	21.9	2.3	2.2	chr7	5556699	5556742	(153789231)	+	G-rich	Low_complexity	1	45	(0)	3567328
1385	13.2	0.5	0.0	chr7	5609187	5609383	(153736590)	+	AluSx1	SINE/Alu	115	312	(0)	3567460
16	0.0	4.3	0.0	chr7	5609384	5609406	(153736567)	+	(AAAG)n	Simple_repeat	1	24	(0)	3567461
1765	8.7	15.7	0.4	chr7	5609853	5610106	(153735867)	C	AluSx4	SINE/Alu	(10)	300	1	3567462
2266	7.7	0.0	0.0	chr7	6435206	6435502	(152910471)	+	AluSc5	SINE/Alu	1	297	(12)	3569356
203	32.7	4.5	7.0	chr7	6435800	6435914	(152910059)	+	MIR3	SINE/MIR	65	176	(32)	3569357
18	14.8	0.0	2.5	chr7	6435996	6436035	(152909938)	+	(TTTGGT)n	Simple_repeat	1	40	(0)	3569358
21	18.6	4.0	5.1	chr7	6436079	6436153	(152909820)	+	GA-rich	Low_complexity	1	78	(0)	3569359
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
17	22.7	2.2	0.0	chr7	7969361	7969406	(151376567)	+	(CCT)n	Simple_repeat	1	47	(0)	3571875
12	16.9	2.9	2.8	chr7	7969428	7969462	(151376511)	+	(CGC)n	Simple_repeat	1	36	(0)	3571876
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
997	22.0	15.0	5.3	chr7	12588442	12588873	(146757100)	C	LTR21A	LTR/ERV1	(0)	481	1	3577552
2250	19.9	1.5	1.9	chr7	12588874	12589215	(146756758)	C	HERVFH21-int	LTR/ERV1	(0)	6529	6184	3577552
187	27.5	2.8	2.8	chr7	16420560	16420630	(142925343)	+	L2b	LINE/L2	3287	3357	(18)	3582434
13	21.9	2.3	2.2	chr7	16646094	16646137	(142699836)	+	G-rich	Low_complexity	1	45	(0)	3582782
32	3.0	0.0	0.0	chr7	16646203	16646236	(142699737)	+	(CTG)n	Simple_repeat	1	34	(0)	3582783
14	11.7	0.0	3.3	chr7	20786969	20786998	(138558975)	+	(GCCGC)n	Simple_repeat	1	30	(0)	3588263
15	15.9	2.9	0.0	chr7	20787033	20787067	(138558906)	+	G-rich	Low_complexity	1	36	(0)	3588264
16	22.8	6.6	0.0	chr7	21428284	21428344	(137917629)	+	(CTCC)n	Simple_repeat	1	65	(0)	3589266
15	12.2	0.0	0.0	chr7	21428680	21428720	(137917253)	+	(AGG)n	Simple_repeat	1	41	(0)	3589267
641	27.8	11.5	4.7	chr7	22565670	22566204	(136779769)	+	L2a	LINE/L2	2111	2686	(733)	3590855
5041	17.1	3.3	8.8	chr7	23749652	23750508	(135595465)	C	L1MCa	LINE/L1	(5704)	804	1	3592932
2097	26.2	3.0	3.8	chr7	23750512	23750735	(135595238)	C	L1M5	LINE/L1	(3087)	3059	2833	3592937
1193	13.4	0.0	0.0	chr7	25068490	25068661	(134277312)	+	AluSx	SINE/Alu	133	304	(8)	3594835
1723	27.4	11.8	1.5	chr7	25068665	25069486	(134276487)	C	L2a	LINE/L2	(780)	2639	1722	3594833
47	29.5	1.4	4.4	chr7	28180622	28180844	(131165129)	+	G-rich	Low_complexity	1	226	(0)	3599624
229	9.3	2.3	0.0	chr7	30746169	30746211	(128599762)	+	L1MD2	LINE/L1	6108	6151	(208)	3603594
1249	14.1	0.0	3.5	chr7	30746254	30746481	(128599492)	+	L1MD2	LINE/L1	6138	6357	(2)	3603594
2650	1.6	0.0	0.0	chr7	30746490	30746792	(128599181)	+	AluYa5	SINE/Alu	1	303	(8)	3603595
616	24.7	5.5	1.2	chr7	30879815	30879986	(128465987)	+	MER104	DNA/TcMar-Tc2	2	181	(0)	3603816
216	33.7	4.8	1.0	chr7	30879997	30880095	(128465878)	+	L2b	LINE/L2	3215	3317	(58)	3603814
16	16.5	0.0	0.0	chr7	30880291	30880317	(128465656)	+	(C)n	Simple_repeat	1	27	(0)	3603817
43	25.8	1.5	6.8	chr7	32891819	32892022	(126453951)	+	(CCGC)n	Simple_repeat	1	207	(0)	3606930
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
194	24.1	6.5	4.9	chr7	36278315	36278375	(123067598)	+	L3	LINE/CR1	3755	3816	(283)	3612036
203	35.1	0.0	1.3	chr7	36278514	36278591	(123067382)	C	MER5B	DNA/hAT-Charlie	(101)	77	1	3612037
9677	13.7	0.3	0.2	chr7	36473037	36474452	(122871521)	C	HERVL18-int	LTR/ERVL	(2)	6045	4629	3612367
548	17.8	5.7	1.9	chr7	36515056	36516516	(122829457)	+	(AC)n	Simple_repeat	1	1544	(0)	3612426
33	22.0	2.3	2.2	chr7	38331434	38331521	(121014452)	+	(TG)n	Simple_repeat	1	90	(0)	3614959
328	18.1	7.8	1.2	chr7	38331595	38331678	(121014295)	C	MER53	DNA/hAT	(79)	114	25	3614960
303	21.6	8.3	1.1	chr7	38331604	38331692	(121014281)	+	MER53	DNA/hAT	98	193	(0)	3614961
289	23.5	3.4	3.4	chr7	38331734	38331821	(121014152)	+	L1ME2z	LINE/L1	6300	6387	(57)	3614962
334	31.2	9.1	6.4	chr7	39621949	39622355	(119723618)	+	L2c	LINE/L2	2351	2769	(650)	3616826
215	22.2	0.0	0.0	chr7	39622447	39622491	(119723482)	+	L2c	LINE/L2	2911	2955	(432)	3616826
15	0.0	0.0	0.0	chr7	39949858	39949876	(119396097)	+	(GGC)n	Simple_repeat	1	19	(0)	3617484
13	27.2	3.4	5.5	chr7	39949956	39950043	(119395930)	+	(CCCAG)n	Simple_repeat	1	91	(0)	3617485
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
50	3.7	1.8	0.0	chr7	40624773	40624827	(118721146)	+	(AC)n	Simple_repeat	1	56	(0)	3618747
318	18.0	6.5	4.8	chr7	40624830	40624934	(118721039)	+	Charlie15a	DNA/hAT-Charlie	118	224	(0)	3618748
1089	27.3	9.9	6.5	chr7	40624997	40625679	(118720294)	C	LTR85b	LTR/Gypsy?	(0)	784	74	3618749
3134	1.6	0.0	0.0	chr7	42706336	42706653	(116639320)	+	AluYb8	SINE/Alu	1	318	(0)	3621584
1797	16.6	2.4	5.4	chr7	42706654	42706926	(116639047)	C	MER61A	LTR/ERV1	(73)	268	3	3621583
418	20.6	14.3	0.0	chr7	43730025	43730126	(115615847)	+	MIR	SINE/MIR	144	262	(0)	3623064
12	12.8	5.6	2.6	chr7	43758492	43758527	(115587446)	+	(GGCGCCA)n	Simple_repeat	1	38	(0)	3623125
23	15.4	1.9	1.9	chr7	43758557	43758608	(115587365)	+	(CCCTC)n	Simple_repeat	1	53	(0)	3623126
13	32.2	0.0	6.5	chr7	43758609	43758648	(115587325)	+	(CCCCCCG)n	Simple_repeat	1	92	(0)	3623127
1848	17.2	0.0	2.2	chr7	43931155	43931473	(115414500)	+	AluJb	SINE/Alu	1	312	(0)	3623476
1752	15.3	11.7	13.3	chr7	43931474	43931694	(115414279)	C	MSTA	LTR/ERVL-MaLR	(36)	392	191	3623474
1780	14.0	5.8	1.0	chr7	43931695	43931987	(115413986)	C	AluSz6	SINE/Alu	(4)	308	1	3623477
1471	15.4	3.6	4.3	chr7	44019778	44020056	(115325917)	C	AluJr	SINE/Alu	(2)	310	34	3623674
8230	3.6	3.9	0.5	chr7	44020067	44021039	(115324934)	+	LTR13	LTR/ERVK	1	1007	(0)	3623675
13	24.8	0.0	0.0	chr7	44748174	44748211	(114597762)	+	(ACTGAGA)n	Simple_repeat	1	38	(0)	3624788
20	12.2	2.1	4.1	chr7	44748351	44748398	(114597575)	+	G-rich	Low_complexity	1	49	(0)	3624789
50	22.4	4.0	6.6	chr7	44885267	44885513	(114460460)	+	(CGC)n	Simple_repeat	1	257	(0)	3625085
13	16.8	2.2	6.4	chr7	45000272	45000317	(114345656)	+	(GGCGGCG)n	Simple_repeat	1	47	(0)	3625320
18	15.1	5.5	3.5	chr7	45000448	45000502	(114345471)	+	G-rich	Low_complexity	1	58	(0)	3625321
258	30.2	3.6	0.9	chr7	47979832	47979938	(111366035)	+	Charlie21a	DNA/hAT-Charlie	27	136	(1077)	3629309
254	25.4	0.0	1.7	chr7	50285582	50285641	(109060332)	C	Charlie4z	DNA/hAT-Charlie	(24)	143	85	3632207
14	22.2	4.3	0.0	chr7	50369114	50369160	(108976813)	+	(ATGTAT)n	Simple_repeat	1	49	(0)	3632291
302	25.7	11.4	1.0	chr7	50369572	50369673	(108976300)	+	Tigger16a	DNA/TcMar-Tigger	102	215	(742)	3632292
657	27.2	10.2	0.9	chr7	50791432	50791644	(108554329)	+	MIRc	SINE/MIR	17	254	(14)	3632780
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
306	32.2	10.1	7.8	chr7	65558452	65558709	(93787264)	C	MIRb	SINE/MIR	(1)	261	4	3648019
219	25.9	10.8	4.6	chr7	65558918	65559061	(93786912)	C	MIR3	SINE/MIR	(111)	151	1	3648020
756	15.0	0.0	8.5	chr7	65732124	65732288	(93613685)	C	AluJb	SINE/Alu	(84)	218	1	3648327
2095	13.2	0.3	0.0	chr7	65732300	65732595	(93613378)	+	AluSx	SINE/Alu	1	297	(15)	3648328
2335	6.9	1.4	0.0	chr7	65769921	65770211	(93575762)	C	AluSq2	SINE/Alu	(18)	295	1	3648427
1013	13.0	14.0	9.0	chr7	65981103	65981211	(93364762)	+	AluJr	SINE/Alu	11	126	(186)	3648922
2146	10.5	0.3	4.3	chr7	65981212	65981534	(93364439)	C	AluSx	SINE/Alu	(0)	312	3	3648923
1013	13.0	14.0	9.0	chr7	65981535	65981701	(93364272)	+	AluJr	SINE/Alu	127	303	(9)	3648922
2385	4.6	4.5	2.3	chr7	66114385	66114687	(93231286)	+	AluSc8	SINE/Alu	1	310	(1)	3649274
17	4.9	0.0	0.0	chr7	66628734	66628754	(92717219)	+	(C)n	Simple_repeat	1	21	(0)	3650448
13	24.4	3.5	3.4	chr7	66628916	66628972	(92717001)	+	(CCGC)n	Simple_repeat	1	59	(0)	3650449
2329	5.7	0.3	2.7	chr7	66844045	66844343	(92501630)	C	AluSg7	SINE/Alu	(17)	292	1	3650960
2441	7.0	0.3	0.0	chr7	66976201	66976498	(92369475)	+	AluSp	SINE/Alu	2	300	(13)	3651243
15	5.5	0.0	0.0	chr7	66976541	66976559	(92369414)	+	(G)n	Simple_repeat	1	19	(0)	3651244
917	12.4	0.0	0.0	chr7	66976604	66976740	(92369233)	C	AluSx	SINE/Alu	(17)	295	159	3651245
1717	4.8	0.5	0.0	chr7	66976743	66976948	(92369025)	C	LTR2B	LTR/ERV1	(276)	207	1	3651246
4442	10.5	1.4	3.5	chr7	67360950	67361269	(91984704)	+	LTR9D	LTR/ERV1	340	645	(0)	3652039
4075	12.1	4.4	1.3	chr7	67361270	67361627	(91984346)	+	MER41B	LTR/ERV1	262	634	(0)	3652038
424	21.8	2.9	1.9	chr7	67438282	67438384	(91907589)	+	MLT1K	LTR/ERVL-MaLR	150	253	(342)	3652233
14	15.4	6.7	2.1	chr7	67438417	67438461	(91907512)	+	(TGTT)n	Simple_repeat	1	48	(0)	3652234
58	4.2	1.4	0.0	chr7	67438591	67438663	(91907310)	+	(GA)n	Simple_repeat	1	74	(0)	3652235
201	26.8	3.5	0.0	chr7	67438830	67438885	(91907088)	+	MIR3	SINE/MIR	144	201	(7)	3652236
2402	6.7	0.0	0.0	chr7	72827126	72827407	(86518566)	+	AluSx	SINE/Alu	1	282	(30)	3663154
1818	8.5	1.7	0.0	chr7	72830298	72830532	(86515441)	+	AluSq2	SINE/Alu	44	282	(31)	3663158
371	32.8	7.9	7.4	chr7	73154240	73154654	(86191319)	+	L2c	LINE/L2	2915	3334	(41)	3663984
29	5.9	0.0	0.0	chr7	73154801	73154836	(86191137)	+	(GCA)n	Simple_repeat	1	36	(0)	3663985
18	23.9	3.5	5.6	chr7	73154956	73155042	(86190931)	+	(CCG)n	Simple_repeat	1	90	(0)	3663986
11	24.7	2.2	2.2	chr7	73155083	73155127	(86190846)	+	(CCCCGCC)n	Simple_repeat	1	46	(0)	3663987
19	9.2	2.9	0.0	chr7	73521779	73521813	(85824160)	+	(CCCGG)n	Simple_repeat	1	36	(0)	3664803
16	22.6	3.3	3.2	chr7	73521924	73521983	(85823990)	+	(GCG)n	Simple_repeat	1	62	(0)	3664804
2099	8.4	0.7	0.0	chr7	73522992	73523266	(85822707)	C	AluSp	SINE/Alu	(1)	312	36	3664805
14	21.7	0.0	8.1	chr7	73557165	73557226	(85788747)	+	G-rich	Low_complexity	1	62	(0)	3664903
21	16.8	3.0	5.8	chr7	73557632	73557698	(85788275)	+	(CGC)n	Simple_repeat	1	69	(0)	3664904
13	17.4	5.3	5.0	chr7	73557829	73557885	(85788088)	+	(CGAGGTG)n	Simple_repeat	1	60	(0)	3664905
2326	8.4	1.0	0.3	chr7	73622209	73622504	(85723469)	+	AluSq	SINE/Alu	1	298	(15)	3665075
1494	15.9	0.7	8.3	chr7	73622505	73622643	(85723330)	C	AluJo	SINE/Alu	(179)	133	1	3665074
2700	3.2	0.0	0.6	chr7	73666962	73667273	(85678700)	C	AluY	SINE/Alu	(1)	310	1	3665206
1074	18.0	11.3	17.9	chr7	73667274	73667430	(85678543)	C	AluJb	SINE/Alu	(167)	135	1	3665205
252	22.4	4.9	0.0	chr7	73667437	73667494	(85678479)	C	MIR3	SINE/MIR	(39)	169	109	3665207
35	5.0	1.4	6.8	chr7	73667848	73667919	(85678054)	+	(CGGAG)n	Simple_repeat	1	73	(0)	3665208
189	30.8	7.1	0.0	chr7	73683366	73683430	(85662543)	+	MamRTE1	LINE/RTE-BovB	857	926	(2886)	3665233
17	23.3	2.0	0.0	chr7	73828071	73828120	(85517853)	+	G-rich	Low_complexity	1	51	(0)	3665577
270	31.7	7.7	0.0	chr7	73828247	73828366	(85517607)	+	MIRc	SINE/MIR	94	223	(45)	3665578
2063	14.7	1.0	0.3	chr7	73885809	73886115	(85459858)	+	AluJr	SINE/Alu	1	309	(3)	3665709
806	19.4	2.2	5.3	chr7	73886116	73886239	(85459734)	C	MER5A	DNA/hAT-Charlie	(56)	133	6	3665708
194	22.7	0.0	4.3	chr7	73886247	73886292	(85459681)	+	UCON132b	DNA/hAT-Tip100	103	146	(2)	3665710
4322	9.3	0.9	3.1	chr7	74160039	74160487	(85185486)	+	MER41B	LTR/ERV1	1	453	(181)	3666363
1898	13.3	0.0	5.6	chr7	74160488	74160810	(85185163)	+	AluSz	SINE/Alu	3	307	(5)	3666364
2062	13.4	0.0	0.0	chr7	74160821	74161125	(85184848)	+	AluSc8	SINE/Alu	1	305	(6)	3666365
21	18.3	0.0	0.0	chr7	74174225	74174268	(85171705)	+	(GCGT)n	Simple_repeat	1	44	(0)	3666407
14	12.3	5.4	2.6	chr7	74174287	74174323	(85171650)	+	(GGC)n	Simple_repeat	1	39	(0)	3666408
1097	18.8	0.5	0.0	chr7	74279824	74280025	(85065948)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	3666661
23	6.0	0.0	2.7	chr7	74280042	74280078	(85065895)	+	(CCTCC)n	Simple_repeat	1	37	(0)	3666662
26	6.3	0.0	0.0	chr7	74280079	74280112	(85065861)	+	(CTTT)n	Simple_repeat	1	34	(0)	3666663
1558	14.7	0.5	0.0	chr7	74280127	74280350	(85065623)	C	AluJr	SINE/Alu	(64)	248	24	3666664
2256	10.7	0.3	0.0	chr7	74280353	74280651	(85065322)	+	AluSx	SINE/Alu	2	301	(11)	3666665
22	13.4	7.0	4.0	chr7	74453999	74454069	(84891904)	+	(CCTCG)n	Simple_repeat	1	76	(0)	3667134
14	18.7	2.2	4.3	chr7	74454098	74454143	(84891830)	+	(GGCCGG)n	Simple_repeat	1	47	(0)	3667135
14	18.3	6.8	0.0	chr7	74454217	74454260	(84891713)	+	(CTCCGC)n	Simple_repeat	1	47	(0)	3667136
1277	24.6	11.4	2.9	chr7	74656107	74656620	(84689353)	+	Tigger13a	DNA/TcMar-Tigger	61	623	(148)	3667693
14	23.5	3.1	4.5	chr7	74658156	74658220	(84687753)	+	G-rich	Low_complexity	1	67	(0)	3667696
14	17.1	0.0	2.9	chr7	74658232	74658266	(84687707)	+	(CCCCCT)n	Simple_repeat	1	35	(0)	3667697
13	9.4	0.0	11.6	chr7	74851375	74851417	(84494556)	+	(GCCGG)n	Simple_repeat	1	43	(0)	3668128
13	21.7	0.0	0.0	chr7	74964560	74964591	(84381382)	+	(CAG)n	Simple_repeat	1	32	(0)	3668468
368	30.4	1.7	0.9	chr7	74994348	74994463	(84351510)	+	MIRb	SINE/MIR	77	193	(75)	3668549
2279	10.1	0.7	0.3	chr7	74994471	74994766	(84351207)	+	AluSx1	SINE/Alu	3	299	(13)	3668550
12	12.0	3.7	0.0	chr7	75092733	75092759	(84253214)	+	(CGCGG)n	Simple_repeat	1	28	(0)	3668774
20	29.7	2.7	0.0	chr7	75092760	75092806	(84253167)	+	(CCG)n	Simple_repeat	2	77	(0)	3668775
796	16.2	7.2	0.7	chr7	75554794	75554923	(83791050)	+	AluJr4	SINE/Alu	1	141	(171)	3669901
1549	16.4	8.7	0.0	chr7	75554924	75555185	(83790788)	+	AluJo	SINE/Alu	1	287	(25)	3669902
796	16.2	7.2	0.7	chr7	75555186	75555196	(83790777)	+	AluJr4	SINE/Alu	142	152	(160)	3669901
269	30.6	13.3	1.8	chr7	75555217	75555329	(83790644)	C	MER5B	DNA/hAT-Charlie	(50)	128	1	3669903
44	2.4	0.0	0.0	chr7	75637993	75638034	(83707939)	+	(CA)n	Simple_repeat	1	42	(0)	3670119
847	8.4	3.1	5.5	chr7	75778463	75778626	(83567347)	C	L1M2	LINE/L1	(806)	5485	5326	3670511
898	11.9	0.0	0.0	chr7	75778629	75778754	(83567219)	C	AluSx3	SINE/Alu	(14)	297	172	3670513
808	7.8	0.0	4.3	chr7	75778797	75778911	(83567062)	+	AluSx3	SINE/Alu	2	111	(200)	3670514
2226	7.8	6.0	1.1	chr7	75778912	75779306	(83566667)	+	LTR7	LTR/ERV1	1	461	(3)	3670515
2850	12.7	0.2	2.1	chr7	75779310	75779777	(83566196)	+	HERVH-int	LTR/ERV1	1	459	(7254)	3670515
7918	12.9	3.8	4.5	chr7	75780003	75781535	(83564438)	+	HERVH-int	LTR/ERV1	458	1978	(5735)	3670515
225	28.4	2.9	0.0	chr7	76048894	76048960	(83297013)	C	MER5A	DNA/hAT-Charlie	(2)	187	119	3671212
16	0.0	0.0	0.0	chr7	76048982	76048998	(83296975)	+	(G)n	Simple_repeat	1	17	(0)	3671213
266	16.7	10.8	0.0	chr7	76049171	76049236	(83296737)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	399	3671214
233	20.4	3.9	0.0	chr7	76049255	76049303	(83296670)	+	Tigger5b	DNA/TcMar-Tigger	412	462	(10)	3671214
2138	8.2	0.7	2.0	chr7	76167260	76167553	(83178420)	+	AluSg7	SINE/Alu	1	290	(19)	3671470
12	25.3	3.8	1.8	chr7	76282879	76282931	(83063042)	+	(GCCGG)n	Simple_repeat	1	55	(0)	3671776
14	3.5	6.1	5.7	chr7	76303882	76303914	(83042059)	+	(GGTGG)n	Simple_repeat	1	35	(0)	3671829
1881	14.5	2.4	0.7	chr7	76304459	76304748	(83041225)	+	AluJr4	SINE/Alu	1	295	(17)	3671830
18	19.6	0.0	0.0	chr7	76327655	76327689	(83018284)	+	(C)n	Simple_repeat	1	35	(0)	3671879
1797	13.8	1.3	8.9	chr7	76379384	76379710	(82966263)	C	AluJo	SINE/Alu	(10)	302	1	3672004
2142	11.9	0.6	1.0	chr7	76410020	76410330	(82935643)	C	AluSz6	SINE/Alu	(2)	310	1	3672083
27	0.0	0.0	0.0	chr7	77537106	77537131	(81808842)	+	(GCGGCT)n	Simple_repeat	1	26	(0)	3673970
13	23.8	0.0	2.1	chr7	77537132	77537169	(81808804)	+	G-rich	Low_complexity	8	45	(0)	3673971
34	0.0	0.0	0.0	chr7	77537204	77537234	(81808739)	+	(GGC)n	Simple_repeat	1	31	(0)	3673972
12	13.7	0.0	0.0	chr7	77537368	77537391	(81808582)	+	(GCC)n	Simple_repeat	1	24	(0)	3673973
28	16.7	4.3	0.8	chr7	78083322	78083381	(81262592)	+	GA-rich	Low_complexity	1	62	(0)	3674981
62	3.3	0.0	0.0	chr7	78083388	78083449	(81262524)	+	(GA)n	Simple_repeat	1	62	(0)	3674982
315	28.8	0.0	10.3	chr7	86882194	86882309	(72463664)	C	L2c	LINE/L2	(15)	3372	3269	3686495
217	39.1	2.6	2.6	chr7	86882594	86882706	(72463267)	+	L2b	LINE/L2	3250	3362	(13)	3686496
336	33.1	14.4	0.7	chr7	86882732	86882880	(72463093)	+	MIR3	SINE/MIR	15	187	(21)	3686497
686	17.2	5.8	1.2	chr7	86921879	86922043	(72423930)	C	MER33	DNA/hAT-Charlie	(0)	324	152	3686551
243	23.7	14.9	3.3	chr7	86922190	86922372	(72423601)	C	L1ME4c	LINE/L1	(57)	773	566	3686552
14	18.4	2.7	0.0	chr7	86922405	86922441	(72423532)	+	A-rich	Low_complexity	1	38	(0)	3686553
334	26.5	14.9	0.9	chr7	86922445	86922657	(72423316)	C	L1ME4a	LINE/L1	(83)	6041	5794	3686554
246	26.0	1.4	0.0	chr7	87105259	87105331	(72240642)	+	L1P4	LINE/L1	5678	5751	(423)	3686791
824	13.5	0.0	1.5	chr7	87105455	87105589	(72240384)	+	MSTA	LTR/ERVL-MaLR	213	345	(83)	3686792
188	35.4	7.1	3.0	chr7	87105675	87105808	(72240165)	C	MIR3	SINE/MIR	(6)	202	63	3686793
13	15.4	2.5	4.9	chr7	87152981	87153020	(72192953)	+	(TTTTTAG)n	Simple_repeat	1	41	(0)	3686860
4477	9.3	1.4	0.2	chr7	87330749	87331310	(72014663)	C	MER61E	LTR/ERV1	(0)	569	1	3687051
4066	15.1	5.5	2.3	chr7	87331453	87332152	(72013821)	+	LTR8A	LTR/ERV1	4	727	(0)	3687053
1939	10.3	8.1	6.7	chr7	88204265	88204639	(71141334)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3688210
22	10.3	9.6	0.0	chr7	90404013	90404064	(68941909)	+	GA-rich	Low_complexity	1	57	(0)	3691027
227	28.7	12.2	4.7	chr7	91940108	91940213	(67405760)	C	MIRb	SINE/MIR	(141)	127	13	3693106
197	33.3	4.1	6.4	chr7	91940294	91940418	(67405555)	C	L2c	LINE/L2	(224)	3163	3042	3693105
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
934	22.8	5.2	2.1	chr7	91953379	91953620	(67392353)	+	MIR	SINE/MIR	12	261	(1)	3693132
16	31.2	0.0	0.0	chr7	92246063	92246121	(67099852)	+	(GGCGGT)n	Simple_repeat	1	59	(0)	3693578
13	24.4	4.2	0.0	chr7	92246093	92246140	(67099833)	+	G-rich	Low_complexity	1	50	(0)	3693579
748	15.0	17.7	0.7	chr7	92447150	92447303	(66898670)	+	MER53	DNA/hAT	3	188	(5)	3693907
225	0.0	0.0	0.0	chr7	92447312	92447336	(66898637)	+	Charlie1b	DNA/hAT-Charlie	495	519	(4)	3693908
26	22.3	3.5	2.2	chr7	92447832	92447918	(66898055)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	3693909
268	27.4	11.7	2.4	chr7	92589482	92589673	(66756300)	C	MIR	SINE/MIR	(53)	215	2	3694134
17	9.0	10.2	1.9	chr7	92836604	92836652	(66509321)	+	(GGCGGAG)n	Simple_repeat	1	54	(0)	3694480
13	16.0	0.0	3.2	chr7	94656131	94656161	(64689812)	+	(CTCCC)n	Simple_repeat	1	31	(0)	3696936
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
691	20.1	6.4	7.3	chr7	97179559	97179762	(62166211)	+	MER20	DNA/hAT-Charlie	18	219	(0)	3700395
3131	18.9	5.2	0.7	chr7	97930076	97930678	(61415295)	+	ERVL-B4-int	LTR/ERVL	1473	2104	(3610)	3701519
193	32.2	3.3	1.7	chr7	97930684	97930743	(61415230)	C	MIR	SINE/MIR	(187)	75	15	3701518
18	14.7	0.0	0.0	chr7	97930841	97930877	(61415096)	+	(C)n	Simple_repeat	1	37	(0)	3701520
2009	13.6	0.7	0.0	chr7	97931065	97931359	(61414614)	+	AluSc	SINE/Alu	7	303	(6)	3701521
12	23.8	2.2	2.1	chr7	98281281	98281326	(61064647)	+	(CCCGCC)n	Simple_repeat	1	47	(0)	3702253
15	10.8	2.1	8.3	chr7	98281484	98281530	(61064443)	+	G-rich	Low_complexity	1	48	(0)	3702254
21	17.2	7.5	1.4	chr7	98281531	98281547	(61064426)	+	(GCG)n	Simple_repeat	4	72	(0)	3702255
1671	19.7	5.7	0.3	chr7	98754555	98754921	(60591052)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	3	3703325
24	6.8	0.0	0.0	chr7	98754928	98754958	(60591015)	+	(C)n	Simple_repeat	1	31	(0)	3703326
2192	21.3	8.0	0.9	chr7	99133437	99133994	(60211979)	+	L1ME3A	LINE/L1	5413	6013	(160)	3704022
372	0.0	0.0	0.0	chr7	99134098	99134137	(60211836)	C	AluJo	SINE/Alu	(10)	302	263	3704023
13	15.9	0.0	0.0	chr7	99134165	99134192	(60211781)	+	(TTGTT)n	Simple_repeat	1	28	(0)	3704024
244	15.4	0.0	0.0	chr7	99134256	99134294	(60211679)	+	L1MD2	LINE/L1	6207	6245	(114)	3704025
730	13.6	0.0	0.0	chr7	99291512	99291621	(60054352)	+	AluJr	SINE/Alu	2	111	(201)	3704398
1892	11.8	5.4	0.0	chr7	99291678	99291956	(60054017)	+	AluSq2	SINE/Alu	2	296	(17)	3704399
259	30.6	11.0	4.0	chr7	99409604	99409729	(59936244)	+	MIRb	SINE/MIR	9	144	(124)	3704672
411	26.5	9.5	0.2	chr7	99409956	99410149	(59935824)	C	MIR3	SINE/MIR	(7)	223	7	3704673
1646	7.6	1.1	14.5	chr7	99438153	99438455	(59907518)	+	AluJr	SINE/Alu	12	273	(39)	3704734
2371	6.0	1.0	0.7	chr7	100082302	100082600	(59263373)	+	AluSx1	SINE/Alu	1	300	(12)	3705822
22	19.5	0.0	3.5	chr7	100100466	100100522	(59245451)	+	(CCCCCG)n	Simple_repeat	1	57	(0)	3705858
1579	15.3	4.5	7.2	chr7	100148165	100148485	(59197488)	C	AluJr	SINE/Alu	(0)	312	1	3705967
2341	6.2	0.0	3.6	chr7	100199774	100200082	(59145891)	+	AluY	SINE/Alu	1	298	(13)	3706057
1704	16.6	0.0	8.4	chr7	100450178	100450292	(58895681)	C	AluJr	SINE/Alu	(197)	115	7	3706609
19	12.2	7.0	3.3	chr7	100483742	100483812	(58862161)	+	(GCCCCCGC)n	Simple_repeat	1	73	(0)	3706692
16	22.6	0.0	0.0	chr7	100483847	100483887	(58862086)	+	G-rich	Low_complexity	1	41	(0)	3706693
13	4.9	0.0	4.3	chr7	100483937	100483959	(58862014)	+	(CTC)n	Simple_repeat	1	23	(0)	3706694
12	7.4	3.1	6.1	chr7	100574779	100574810	(58771163)	+	G-rich	Low_complexity	1	33	(0)	3706890
21	16.5	0.0	9.5	chr7	100604243	100604316	(58741657)	+	(CCGCC)n	Simple_repeat	1	74	(0)	3706932
11	21.4	4.4	2.1	chr7	100676142	100676186	(58669787)	+	(GGCCTCA)n	Simple_repeat	1	47	(0)	3707122
14	17.7	6.3	4.5	chr7	100694434	100694496	(58651477)	+	(GCCCCGAC)n	Simple_repeat	1	67	(0)	3707149
1831	12.0	9.6	0.7	chr7	100694764	100695047	(58650926)	C	AluSz6	SINE/Alu	(0)	312	1	3707150
12	16.5	0.0	0.0	chr7	100825973	100825999	(58519974)	+	(CCCAG)n	Simple_repeat	1	27	(0)	3707460
13	24.6	5.1	1.6	chr7	100827218	100827276	(58518697)	+	G-rich	Low_complexity	1	62	(0)	3707461
2415	6.0	0.0	4.1	chr7	100828260	100828575	(58517398)	+	AluSz	SINE/Alu	4	306	(6)	3707464
11	21.9	0.0	2.5	chr7	100828576	100828603	(58517370)	+	G-rich	Low_complexity	12	38	(0)	3707465
2370	8.4	0.0	0.0	chr7	100828990	100829287	(58516686)	C	AluSz	SINE/Alu	(14)	298	1	3707466
2212	9.3	2.4	0.7	chr7	100984870	100985159	(58360814)	C	AluSx1	SINE/Alu	(17)	295	1	3707772
3770	6.7	4.9	0.2	chr7	100985163	100985672	(58360301)	C	LTR8	LTR/ERV1	(156)	535	1	3707773
19	18.4	4.1	0.0	chr7	101059047	101059095	(58286878)	+	(AGAC)n	Simple_repeat	1	51	(0)	3707871
51	0.0	0.0	0.0	chr7	101059107	101059150	(58286823)	+	(GA)n	Simple_repeat	1	44	(0)	3707872
302	32.6	9.3	2.0	chr7	101059237	101059386	(58286587)	+	MIR3	SINE/MIR	44	205	(3)	3707873
725	7.1	4.0	1.0	chr7	101138804	101138901	(58207072)	+	AluJo	SINE/Alu	24	124	(188)	3708076
28	18.7	3.3	0.0	chr7	101138902	101138962	(58207011)	+	(TA)n	Simple_repeat	1	63	(0)	3708077
1822	13.4	0.4	1.1	chr7	101218299	101218575	(58127398)	C	AluJr	SINE/Alu	(37)	275	1	3708259
323	34.2	13.2	5.7	chr7	101218640	101219024	(58126949)	C	L2c	LINE/L2	(20)	3367	2950	3708260
12	20.2	0.0	0.0	chr7	101729806	101729820	(57616153)	+	(GCTTTG)n	Simple_repeat	1	15	(0)	3709519
1782	14.6	1.7	2.3	chr7	101729821	101730122	(57615851)	C	AluJr	SINE/Alu	(12)	300	1	3709520
16	15.9	0.0	0.0	chr7	101814087	101814114	(57531859)	+	(C)n	Simple_repeat	1	28	(0)	3709741
454	19.3	0.0	2.3	chr7	101902841	101902928	(57443045)	C	AluJr	SINE/Alu	(105)	207	122	3709900
186	27.3	5.0	2.8	chr7	101903049	101903135	(57442838)	+	MIR3	SINE/MIR	95	184	(84)	3709901
18	23.8	2.7	4.0	chr7	102433016	102433089	(56912884)	+	(CTCCC)n	Simple_repeat	1	76	(0)	3710997
15	23.2	1.3	7.8	chr7	102433626	102433701	(56912272)	+	G-rich	Low_complexity	1	77	(0)	3710998
2285	8.5	1.0	0.0	chr7	102441260	102441565	(56904408)	+	AluSx1	SINE/Alu	1	309	(3)	3711015
16	23.3	0.0	0.0	chr7	102441600	102441634	(56904339)	+	(T)n	Simple_repeat	1	35	(0)	3711016
448	23.5	1.2	0.0	chr7	102441653	102441752	(56904221)	C	MER2	DNA/TcMar-Tigger	(230)	106	1	3711017
2341	16.7	2.8	4.6	chr7	102463630	102463825	(56882148)	C	L1MB2	LINE/L1	(414)	5757	5567	3711064
860	12.4	0.0	0.0	chr7	102464182	102464302	(56881671)	C	AluJo	SINE/Alu	(0)	312	192	3711067
23	2.5	7.0	2.2	chr7	102479069	102479111	(56866862)	+	(CCGCCCC)n	Simple_repeat	1	46	(0)	3711088
23	14.7	0.0	0.0	chr7	102572730	102572767	(56773206)	+	(C)n	Simple_repeat	1	38	(0)	3711320
20	8.9	2.8	0.0	chr7	102671806	102671841	(56674132)	+	(CGCACCC)n	Simple_repeat	1	37	(0)	3711561
326	24.9	16.8	5.5	chr7	104208702	104208884	(55137089)	+	MIRb	SINE/MIR	1	208	(60)	3713811
196	31.6	14.5	1.8	chr7	104209240	104209363	(55136610)	+	L2b	LINE/L2	3224	3416	(10)	3713812
2369	9.2	0.0	0.3	chr7	104944640	104944944	(54401029)	C	AluSx1	SINE/Alu	(8)	304	1	3714874
1523	19.5	0.4	0.8	chr7	104999740	105000000	(54345973)	C	AluJb	SINE/Alu	(24)	288	29	3714982
12	21.6	0.0	8.8	chr7	105013729	105013785	(54332188)	+	G-rich	Low_complexity	1	57	(0)	3715004
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
14	20.2	4.3	2.0	chr7	105388347	105388393	(53957580)	+	(CGCC)n	Simple_repeat	1	49	(0)	3715694
16	18.1	3.6	5.2	chr7	105388451	105388506	(53957467)	+	(GCC)n	Simple_repeat	1	58	(0)	3715695
259	22.9	17.9	2.0	chr7	105389399	105389496	(53956477)	+	MIRc	SINE/MIR	18	134	(134)	3715696
279	27.5	4.8	0.0	chr7	105389613	105389692	(53956281)	C	MIRb	SINE/MIR	(86)	182	99	3715697
1644	25.7	8.2	6.2	chr7	105389959	105390419	(53955554)	C	L1MC4	LINE/L1	(0)	8042	7598	3715698
1507	27.7	8.6	1.3	chr7	106100590	106101264	(53244709)	+	L2a	LINE/L2	2601	3350	(76)	3717098
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
17	9.1	0.0	0.0	chr7	106101778	106101801	(53244172)	+	(A)n	Simple_repeat	1	24	(0)	3717100
257	29.9	2.3	5.9	chr7	106101805	106101914	(53244059)	+	L1ME3F	LINE/L1	4786	4893	(1253)	3717101
2007	20.3	7.2	11.4	chr7	106101915	106102096	(53243877)	+	MLT1F1	LTR/ERVL-MaLR	1	169	(400)	3717102
25555	5.7	1.2	0.2	chr7	106211444	106216075	(53129898)	+	L1PA5	LINE/L1	3267	7573	(0)	3717294
250	30.6	4.5	0.0	chr7	106216104	106216188	(53129785)	+	MIR	SINE/MIR	163	251	(11)	3717295
417	29.2	9.9	2.5	chr7	106216380	106216804	(53129169)	C	MLT1J	LTR/ERVL-MaLR	(35)	477	1	3717296
2399	12.8	5.2	0.0	chr7	106448815	106449196	(52896777)	C	MER57B2	LTR/ERV1	(0)	403	1	3717599
2303	19.0	4.8	3.1	chr7	106502076	106502585	(52843388)	+	LTR53	LTR/ERVL	1	519	(0)	3717663
2186	26.8	12.6	6.0	chr7	106502586	106503785	(52842188)	+	L1MC5	LINE/L1	7485	8588	(716)	3717662
578	30.5	3.2	3.7	chr7	106570837	106571054	(52774919)	C	L4_A_Mam	LINE/RTE-X	(2433)	2557	2341	3717760
513	22.9	6.9	7.4	chr7	106571456	106571658	(52774315)	+	MLT1K	LTR/ERVL-MaLR	4	205	(390)	3717762
2944	17.5	2.5	3.6	chr7	106638837	106639090	(52706883)	+	L1MC	LINE/L1	3824	4062	(2084)	3717865
4253	10.4	2.8	0.8	chr7	106639814	106640434	(52705539)	+	MER41B	LTR/ERV1	1	634	(0)	3717868
230	28.7	2.2	13.0	chr7	106662015	106662114	(52683859)	+	L2a	LINE/L2	3299	3426	(0)	3717898
645	15.2	0.0	9.6	chr7	106736944	106737089	(52608884)	C	MER50B	LTR/ERV1	(565)	132	1	3717979
568	28.9	3.4	3.4	chr7	106737207	106737442	(52608531)	C	L1M4c	LINE/L1	(5905)	408	173	3717977
462	27.2	13.3	5.2	chr7	106737493	106737744	(52608229)	C	L1M5	LINE/L1	(348)	5776	5485	3717980
4321	9.3	1.3	2.8	chr7	106774627	106775270	(52570703)	C	MER41B	LTR/ERV1	(0)	634	1	3718049
1222	19.2	7.8	8.9	chr7	107318541	107318888	(52027085)	C	MLT1B	LTR/ERVL-MaLR	(46)	344	1	3718911
551	26.4	8.2	4.4	chr7	107318903	107319286	(52026687)	C	L1MEf	LINE/L1	(5033)	1382	928	3718912
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
24	21.6	0.0	0.0	chr7	108268609	108268657	(51077316)	+	G-rich	Low_complexity	1	49	(0)	3720299
878	22.8	4.5	0.5	chr7	108268878	108269067	(51076906)	C	MIR	SINE/MIR	(28)	234	37	3720300
631	21.6	6.6	9.4	chr7	108269070	108269304	(51076669)	+	MER96B	DNA/hAT-Tip100	3	230	(187)	3720301
225	28.1	1.1	1.1	chr7	108367804	108367893	(50978080)	C	Tigger14a	DNA/TcMar-Tigger	(14)	310	221	3720434
1008	19.1	23.2	5.6	chr7	108553938	108554259	(50791714)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3720715
28	11.8	5.6	4.0	chr7	108666808	108666878	(50679095)	+	(TCT)n	Simple_repeat	1	75	(0)	3720872
2036	25.8	5.3	2.0	chr7	111476439	111476988	(47868985)	C	MLT1E2	LTR/ERVL-MaLR	(8)	619	51	3724372
261	24.2	0.0	0.0	chr7	111477182	111477241	(47868732)	C	MLT1K	LTR/ERVL-MaLR	(331)	264	205	3724373
985	17.9	4.9	0.6	chr7	111477242	111477415	(47868558)	+	MER45C	DNA/hAT-Tip100	1	182	(771)	3724374
3392	25.2	8.8	5.1	chr7	111477416	111477616	(47868357)	C	L1MEg	LINE/L1	(4655)	1429	1222	3724375
813	33.3	7.4	4.3	chr7	111537831	111538244	(47807729)	+	L2c	LINE/L2	2957	3386	(1)	3724466
21	12.0	2.8	0.0	chr7	111538349	111538384	(47807589)	+	(TG)n	Simple_repeat	1	37	(0)	3724468
1985	12.8	0.3	5.3	chr7	111538518	111538838	(47807135)	+	AluJo	SINE/Alu	1	305	(7)	3724469
858	19.6	13.2	3.1	chr7	111752014	111752271	(47593702)	+	L1MC5	LINE/L1	8979	9266	(38)	3724784
522	22.4	14.5	2.4	chr7	111752276	111752481	(47593492)	C	L2c	LINE/L2	(600)	2819	2585	3724781
2249	10.7	0.7	0.4	chr7	111752579	111752884	(47593089)	C	AluSq	SINE/Alu	(0)	313	2	3724788
1118	21.1	6.1	6.4	chr7	111753035	111753192	(47592781)	C	MER46C	DNA/TcMar-Tigger	(1)	337	186	3724789
440	34.8	9.2	3.3	chr7	111854743	111855108	(47490865)	C	L2a	LINE/L2	(9)	3417	3028	3724944
245	29.1	3.9	4.5	chr7	111855462	111855616	(47490357)	C	L2-1_AMi	LINE/L2	(699)	536	383	3724945
215	31.3	6.2	12.1	chr7	111855664	111855903	(47490070)	+	L2c	LINE/L2	3162	3386	(1)	3724946
26	0.0	0.0	0.0	chr7	111952865	111952889	(47393084)	+	(ACAAAA)n	Simple_repeat	1	25	(0)	3725090
1578	18.1	6.5	0.7	chr7	111952946	111953222	(47392751)	+	AluJb	SINE/Alu	3	296	(16)	3725091
16	9.7	0.0	0.0	chr7	112449827	112449848	(46896125)	+	(G)n	Simple_repeat	1	22	(0)	3725833
6572	8.7	1.1	0.1	chr7	112952623	112953745	(46392228)	C	L1PA11	LINE/L1	(21)	6153	5024	3726504
213	32.3	7.7	2.5	chr7	116499175	116499371	(42846602)	C	MIRb	SINE/MIR	(31)	237	30	3731129
13	21.9	2.3	2.2	chr7	116524797	116524840	(42821133)	+	(CTCGCTG)n	Simple_repeat	1	45	(0)	3731164
230	35.5	9.2	7.4	chr7	116712069	116712490	(42633483)	+	L2c	LINE/L2	2960	3386	(1)	3731444
13	26.9	1.8	1.8	chr7	116712733	116712787	(42633186)	+	A-rich	Low_complexity	1	56	(0)	3731446
1378	11.2	11.1	4.4	chr7	118185244	118185494	(41160479)	C	AluJo	SINE/Alu	(0)	312	43	3733558
1959	10.1	3.0	0.7	chr7	121390285	121390574	(37955399)	+	LTR8	LTR/ERV1	1	297	(394)	3737592
296	31.7	2.7	2.0	chr7	121390655	121390802	(37955171)	+	MER5A	DNA/hAT-Charlie	36	184	(5)	3737593
20	4.3	0.0	0.0	chr7	121390849	121390872	(37955101)	+	(G)n	Simple_repeat	1	24	(0)	3737594
28	18.1	0.0	3.2	chr7	126700966	126701028	(32644945)	+	(TCCT)n	Simple_repeat	1	63	(0)	3744763
18	18.1	0.0	0.0	chr7	126701031	126701062	(32644911)	+	(AT)n	Simple_repeat	1	32	(0)	3744764
189	33.3	0.0	0.0	chr7	126701063	126701119	(32644854)	C	MIR	SINE/MIR	(4)	258	202	3744765
217	36.0	8.7	4.2	chr7	126701429	126701570	(32644403)	C	MER5A	DNA/hAT-Charlie	(3)	186	38	3744766
18	12.2	0.0	0.0	chr7	127379834	127379860	(31966113)	+	(C)n	Simple_repeat	1	27	(0)	3745649
32	3.2	0.0	0.0	chr7	127379871	127379902	(31966071)	+	(AG)n	Simple_repeat	1	32	(0)	3745650
508	33.2	8.3	7.7	chr7	127379921	127380325	(31965648)	+	L2c	LINE/L2	2975	3382	(5)	3745651
18	23.0	8.5	3.1	chr7	127392851	127392968	(31953005)	+	(GCCGAGG)n	Simple_repeat	1	128	(0)	3745668
351	30.1	7.8	0.0	chr7	128122244	128122409	(31223564)	C	Charlie16a	DNA/hAT-Charlie	(100)	242	63	3746642
1772	18.2	1.6	1.6	chr7	128122544	128122912	(31223061)	+	L1MB3	LINE/L1	5815	6183	(0)	3746643
18	19.1	3.3	4.8	chr7	128210127	128210187	(31135786)	+	G-rich	Low_complexity	1	63	(0)	3746797
233	28.0	6.2	2.6	chr7	128352980	128353056	(30992917)	C	MIR3	SINE/MIR	(6)	202	123	3747055
513	29.2	1.5	0.0	chr7	128353035	128353164	(30992809)	+	L2a	LINE/L2	3295	3426	(0)	3747056
409	23.8	10.7	7.4	chr7	128353125	128353287	(30992686)	C	MIR3	SINE/MIR	(22)	186	18	3747057
23	10.0	0.0	0.0	chr7	128353442	128353474	(30992499)	+	(CA)n	Simple_repeat	1	33	(0)	3747058
287	12.1	15.9	0.0	chr7	128381979	128382036	(30963937)	+	MER5A1	DNA/hAT-Charlie	7	75	(91)	3747121
2258	11.4	1.6	0.3	chr7	128382038	128382345	(30963628)	+	AluSz	SINE/Alu	1	312	(0)	3747122
24	18.2	0.0	0.0	chr7	128406281	128406324	(30939649)	+	(C)n	Simple_repeat	1	44	(0)	3747157
200	32.4	9.0	7.8	chr7	128406542	128406695	(30939278)	C	MIRc	SINE/MIR	(1)	267	112	3747158
108	16.2	4.4	0.4	chr7	128422086	128422313	(30923660)	+	(GT)n	Simple_repeat	1	238	(0)	3747189
2001	15.1	0.3	2.5	chr7	128422400	128422718	(30923255)	C	AluJo	SINE/Alu	(0)	312	1	3747190
2472	6.4	0.0	0.3	chr7	128425469	128425765	(30920208)	+	AluSx1	SINE/Alu	1	296	(16)	3747195
548	27.9	3.8	6.1	chr7	128426196	128426237	(30919736)	C	MIRc	SINE/MIR	(13)	255	224	3747196
2177	12.5	0.7	0.3	chr7	128426238	128426542	(30919431)	+	AluSx1	SINE/Alu	2	307	(5)	3747197
545	32.1	4.1	2.3	chr7	128459496	128459709	(30886264)	+	MLT1I	LTR/ERVL-MaLR	80	297	(114)	3747276
312	16.7	3.2	1.6	chr7	128459863	128459923	(30886050)	+	MLT1I	LTR/ERVL-MaLR	350	411	(0)	3747276
263	34.8	13.2	3.0	chr7	128459970	128460255	(30885718)	C	L2b	LINE/L2	(75)	3312	2994	3747277
14	10.8	3.1	3.0	chr7	128531075	128531106	(30814867)	+	(GCCC)n	Simple_repeat	1	33	(0)	3747465
12	23.2	0.0	4.5	chr7	128531223	128531266	(30814707)	+	(CCCCACT)n	Simple_repeat	1	44	(0)	3747466
404	21.2	2.4	2.4	chr7	128699347	128699428	(30646545)	C	LTR85c	LTR/Gypsy?	(0)	823	742	3747817
1594	23.4	6.4	3.2	chr7	128699523	128700082	(30645891)	C	L1M5	LINE/L1	(3306)	2840	2262	3747818
16	19.9	0.0	8.2	chr7	128842459	128842519	(30503454)	+	G-rich	Low_complexity	1	61	(0)	3748042
30	3.1	0.0	2.9	chr7	128858565	128858599	(30487374)	+	(CA)n	Simple_repeat	1	35	(0)	3748058
438	32.6	6.7	1.0	chr7	128863311	128863515	(30482458)	C	MIRb	SINE/MIR	(38)	230	10	3748068
1601	13.8	5.0	5.0	chr7	129401048	129401329	(29944644)	+	AluJb	SINE/Alu	1	282	(30)	3749088
307	28.0	10.2	6.6	chr7	129467887	129468112	(29877861)	C	MIRb	SINE/MIR	(23)	245	11	3749186
569	29.7	4.5	1.0	chr7	129468359	129468552	(29877421)	+	MIRc	SINE/MIR	31	231	(37)	3749187
274	29.2	12.2	9.7	chr7	129468719	129469078	(29876895)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	173	3749188
16	15.0	0.0	4.9	chr7	129780249	129780289	(29565684)	+	(CGCCCCG)n	Simple_repeat	1	41	(0)	3749820
510	27.6	7.3	2.8	chr7	129959366	129959598	(29386375)	+	MIRc	SINE/MIR	4	243	(25)	3750189
237	18.7	7.4	3.9	chr7	130135981	130136058	(29209915)	C	LTR85b	LTR/Gypsy?	(250)	534	454	3750650
225	29.7	3.9	1.3	chr7	130155310	130155384	(29190589)	+	MIR3	SINE/MIR	109	185	(23)	3750680
582	19.8	11.8	1.9	chr7	130155508	130155667	(29190306)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	3750681
38	5.9	0.0	3.5	chr7	130734150	130734206	(28611767)	+	(CGC)n	Simple_repeat	1	57	(0)	3751558
13	16.0	2.7	2.6	chr7	130734430	130734466	(28611507)	+	(GCAGCCC)n	Simple_repeat	1	38	(0)	3751559
24	8.9	8.2	0.0	chr7	131107223	131107271	(28238702)	+	(TCC)n	Simple_repeat	1	53	(0)	3752135
13	22.6	2.4	0.0	chr7	131109595	131109635	(28236338)	+	(ACCCCC)n	Simple_repeat	1	42	(0)	3752138
18	25.3	1.7	1.7	chr7	131110039	131110096	(28235877)	+	GA-rich	Low_complexity	1	59	(0)	3752139
4619	19.8	4.5	4.0	chr7	131352985	131354601	(27991372)	C	L1MD	LINE/L1	(570)	5789	4178	3752654
321	30.3	7.6	0.0	chr7	131354692	131354800	(27991173)	C	L1M5	LINE/L1	(1082)	5064	4947	3752655
16	13.1	0.0	0.0	chr7	131497777	131497801	(27848172)	+	(G)n	Simple_repeat	1	25	(0)	3752903
195	15.8	0.0	0.0	chr7	131689908	131689945	(27656028)	+	MIR3	SINE/MIR	106	143	(65)	3753295
2583	16.3	1.6	4.1	chr7	134030216	134030431	(25315542)	+	L1MB7	LINE/L1	5635	5844	(340)	3756834
3033	11.1	3.8	7.2	chr7	134030432	134030957	(25315016)	C	LTR22E	LTR/ERVK	(0)	507	1	3756835
2583	16.3	1.6	4.1	chr7	134030958	134031304	(25314669)	+	L1MB7	LINE/L1	5845	6184	(0)	3756834
14	19.4	3.9	3.8	chr7	134127583	134127633	(25218340)	+	(GGACGA)n	Simple_repeat	1	53	(0)	3757001
242	17.6	0.0	0.0	chr7	134127948	134127998	(25217975)	+	LTR37B	LTR/ERV1	418	468	(0)	3757002
266	27.4	6.1	8.8	chr7	134721270	134721405	(24624568)	+	MIR3	SINE/MIR	74	205	(3)	3757918
335	31.4	3.3	3.9	chr7	134721591	134721793	(24624180)	+	MIR	SINE/MIR	4	202	(60)	3757919
16	9.3	0.0	0.0	chr7	135168289	135168311	(24177662)	+	(C)n	Simple_repeat	1	23	(0)	3758536
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
500	26.9	10.7	2.0	chr7	135711441	135711637	(23634336)	C	MIRb	SINE/MIR	(18)	250	35	3759450
265	17.6	10.8	3.9	chr7	135939377	135939453	(23406520)	+	LTR67B	LTR/ERVL	36	118	(502)	3759853
18	19.9	0.0	0.0	chr7	135939571	135939605	(23406368)	+	G-rich	Low_complexity	1	35	(0)	3759854
406	33.1	9.0	2.6	chr7	135939746	135939900	(23406073)	+	L2b	LINE/L2	3205	3370	(5)	3759855
19	23.9	5.2	3.7	chr7	136874516	136874592	(22471381)	+	(TC)n	Simple_repeat	1	81	(0)	3761184
533	29.3	8.9	4.1	chr7	137962526	137962867	(21383106)	+	L2a	LINE/L2	3067	3426	(0)	3762657
192	34.2	0.9	0.4	chr7	137962968	137963076	(21382897)	C	L3b	LINE/CR1	(817)	4415	4359	3762656
296	30.7	18.1	0.0	chr7	137963259	137963421	(21382552)	C	L3b	LINE/CR1	(1232)	2867	2669	3762656
1065	19.3	4.0	1.6	chr7	139044364	139044610	(20301363)	+	MER20B	DNA/hAT-Charlie	520	772	(11)	3764801
688	28.5	0.0	5.4	chr7	139044609	139044775	(20301198)	+	MER20B	DNA/hAT-Charlie	63	220	(563)	3764802
1019	19.9	0.0	0.6	chr7	139058256	139058426	(20287547)	+	AluJb	SINE/Alu	86	255	(57)	3764828
15	6.7	9.4	0.0	chr7	139058512	139058543	(20287430)	+	G-rich	Low_complexity	1	35	(0)	3764829
2273	11.2	0.3	0.0	chr7	139180428	139180721	(20165252)	+	AluSz6	SINE/Alu	1	295	(17)	3765058
547	32.9	8.8	5.3	chr7	139762719	139763395	(19582578)	C	L2c	LINE/L2	(0)	3387	2685	3766145
689	24.1	4.5	9.8	chr7	139763396	139763630	(19582343)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	3766146
356	32.0	12.4	5.4	chr7	139763631	139763676	(19582297)	C	L2c	LINE/L2	(735)	2684	2641	3766145
2788	16.4	2.8	0.8	chr7	139763679	139764165	(19581808)	+	Tigger17a	DNA/TcMar-Tigger	1	497	(157)	3766147
24	24.5	6.1	4.5	chr7	139777452	139777598	(19568375)	+	G-rich	Low_complexity	1	156	(0)	3766164
28	3.3	0.0	0.0	chr7	139777806	139777836	(19568137)	+	(CGC)n	Simple_repeat	1	31	(0)	3766165
1904	14.5	3.6	13.3	chr7	140268133	140268452	(19077521)	+	THE1B	LTR/ERVL-MaLR	1	323	(41)	3767037
2352	9.8	0.0	1.0	chr7	140619911	140620215	(18725758)	+	AluSx1	SINE/Alu	1	302	(10)	3767886
307	31.9	3.5	14.8	chr7	140620389	140620550	(18725423)	+	L1ME4a	LINE/L1	5960	6102	(22)	3767883
1207	10.4	0.0	0.0	chr7	140696277	140696430	(18649543)	+	AluSx	SINE/Alu	156	309	(3)	3768041
2441	23.3	8.3	12.8	chr7	140876614	140877269	(18468704)	+	L1MEf	LINE/L1	2844	3409	(3135)	3768326
682	18.1	0.7	7.6	chr7	140877270	140877413	(18468560)	C	FLAM_A	SINE/Alu	(8)	134	1	3768331
2441	21.2	5.9	10.1	chr7	140877414	140878243	(18467730)	+	L1MEf	LINE/L1	3256	4128	(2416)	3768326
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
17	3.5	6.7	0.0	chr7	142854748	142854777	(16491196)	+	(CCGAGC)n	Simple_repeat	1	32	(0)	3771081
1433	25.8	3.5	1.2	chr7	142962568	142962983	(16382990)	C	MER57F	LTR/ERV1	(0)	435	10	3771213
12	25.8	5.5	0.0	chr7	143380491	143380545	(15965428)	+	(GCAGTCC)n	Simple_repeat	1	58	(0)	3771836
11	25.1	0.0	4.3	chr7	143380536	143380581	(15965392)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3771837
17	21.6	5.6	0.0	chr7	143381260	143381313	(15964660)	+	(CTCC)n	Simple_repeat	1	57	(0)	3771838
29	22.4	2.9	7.1	chr7	148884095	148884231	(10461742)	+	(CGC)n	Simple_repeat	1	141	(0)	3779539
765	0.0	0.0	0.0	chr7	148941488	148941571	(10404402)	+	HY5	scRNA	1	84	(0)	3779656
28	31.0	0.0	0.0	chr7	148941873	148941948	(10404025)	+	(TA)n	Simple_repeat	1	76	(0)	3779657
588	11.8	0.0	0.0	chr7	148941968	148942043	(10403930)	C	AluSc	SINE/Alu	(30)	279	204	3779658
808	10.6	0.0	6.8	chr7	148942044	148942175	(10403798)	+	FLAM_C	SINE/Alu	13	135	(8)	3779659
792	4.3	0.0	0.0	chr7	148963315	148963407	(10382566)	+	HY4	scRNA	1	93	(0)	3779711
1781	17.3	1.7	0.7	chr7	148963501	148963789	(10382184)	C	AluJo	SINE/Alu	(20)	292	1	3779712
1732	16.0	2.2	1.3	chr7	149125674	149125986	(10219987)	C	7SLRNA	srpRNA	(4)	316	1	3780093
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
16	25.2	0.0	3.6	chr7	149147655	149147709	(10198264)	+	(CGG)n	Simple_repeat	1	55	(0)	3780152
21	20.4	3.8	2.9	chr7	149261226	149261293	(10084680)	+	A-rich	Low_complexity	1	68	(0)	3780411
403	28.8	4.3	1.6	chr7	149496886	149497034	(9848939)	+	MIR	SINE/MIR	71	231	(37)	3780778
12	29.7	3.2	1.5	chr7	149497362	149497424	(9848549)	+	(CGGACCC)n	Simple_repeat	1	65	(0)	3780779
627	4.1	0.0	0.0	chr7	149691180	149691252	(9654721)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	3781036
1291	25.8	8.0	0.5	chr7	149718996	149719389	(9626584)	C	MLT1C	LTR/ERVL-MaLR	(35)	432	7	3781092
13	28.0	0.0	4.9	chr7	150323401	150323461	(9022512)	+	G-rich	Low_complexity	1	61	(0)	3781882
427	32.1	2.1	1.4	chr7	150323695	150323836	(9022137)	C	MIR	SINE/MIR	(3)	259	117	3781883
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
14	15.4	6.7	2.1	chr7	150368946	150368990	(8976983)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	3781959
670	25.2	5.2	0.5	chr7	150406479	150406681	(8939292)	+	MIRc	SINE/MIR	5	217	(51)	3782014
18	17.9	0.0	4.2	chr7	150407097	150407144	(8938829)	+	(AACTGA)n	Simple_repeat	1	48	(0)	3782015
17	9.7	0.0	5.4	chr7	150947113	150947149	(8398824)	+	G-rich	Low_complexity	1	37	(0)	3782696
11	24.9	0.0	2.5	chr7	150947396	150947435	(8398538)	+	G-rich	Low_complexity	1	40	(0)	3782697
2226	12.8	0.0	0.7	chr7	150961295	150961599	(8384374)	C	AluSz	SINE/Alu	(9)	303	1	3782710
380	27.2	5.0	0.5	chr7	150976591	150976746	(8369227)	C	MIR3	SINE/MIR	(76)	192	31	3782731
25	24.8	1.9	4.7	chr7	150978331	150978349	(8367624)	+	(CGCCCC)n	Simple_repeat	1	69	(37)	3782733
13	22.6	6.5	3.7	chr7	150978350	150978426	(8367547)	+	(CCCCCGCT)n	Simple_repeat	1	82	(0)	3782734
25	24.8	1.9	4.7	chr7	150978427	150978434	(8367539)	+	(CGCCCC)n	Simple_repeat	70	106	(0)	3782733
256	26.1	2.2	3.3	chr7	150983706	150983796	(8362177)	+	MamRep1879	DNA/hAT-Tip100?	9	98	(118)	3782741
225	32.3	2.9	0.0	chr7	150997508	150997606	(8348367)	C	MamSINE1	SINE/tRNA-RTE	(156)	134	33	3782760
19	11.3	0.0	4.8	chr7	151009618	151009659	(8336314)	+	(CCAGCC)n	Simple_repeat	1	42	(0)	3782782
18	10.9	11.1	2.9	chr7	151009660	151009680	(8336293)	+	(CCAGGCC)n	Simple_repeat	1	70	(0)	3782783
1644	15.2	2.1	3.8	chr7	151105475	151105763	(8240210)	+	AluJb	SINE/Alu	2	285	(27)	3782918
47	0.0	2.3	0.0	chr7	151105789	151105832	(8240141)	+	(AC)n	Simple_repeat	1	45	(0)	3782919
493	28.8	5.3	3.1	chr7	151314368	151314589	(8031384)	C	L1M5	LINE/L1	(559)	5565	5339	3783230
257	22.9	0.0	0.0	chr7	151314678	151314725	(8031248)	+	L2b	LINE/L2	3328	3375	(0)	3783227
2211	8.8	3.6	0.0	chr7	151314821	151315114	(8030859)	+	AluSz	SINE/Alu	1	305	(7)	3783231
18	29.5	0.0	5.5	chr7	151519551	151519641	(7826332)	+	(GCGGCG)n	Simple_repeat	1	91	(0)	3783577
13	9.3	0.0	0.0	chr7	151519644	151519666	(7826307)	+	(CTCG)n	Simple_repeat	1	23	(0)	3783578
15	23.4	3.9	5.0	chr7	151631866	151631942	(7714031)	+	(CCCCGGA)n	Simple_repeat	1	80	(0)	3783798
13	18.8	0.0	5.0	chr7	151632021	151632060	(7713913)	+	(GGCCG)n	Simple_repeat	1	40	(0)	3783799
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
271	32.0	3.1	2.1	chr7	151687577	151687758	(7658215)	C	MIR3	SINE/MIR	(7)	201	20	3783896
21	6.7	0.0	2.9	chr7	151688002	151688035	(7657938)	+	(GGA)n	Simple_repeat	1	34	(0)	3783897
14	20.9	4.5	4.3	chr7	152179296	152179334	(7166639)	+	A-rich	Low_complexity	30	66	(0)	3784655
318	29.3	7.5	0.8	chr7	152179665	152179675	(7166298)	+	SVA_E	Retroposon/SVA	211	273	(1114)	3784656
712	15.5	4.6	0.0	chr7	152179676	152179778	(7166195)	C	FLAM_A	SINE/Alu	(34)	108	1	3784657
1583	21.1	0.3	1.7	chr7	152395190	152395488	(6950485)	C	AluJb	SINE/Alu	(17)	295	1	3785022
32	0.0	0.0	0.0	chr7	152395497	152395526	(6950447)	+	(GTTTT)n	Simple_repeat	1	30	(0)	3785023
1930	8.4	0.8	0.0	chr7	152395527	152395765	(6950208)	C	AluSx1	SINE/Alu	(29)	283	43	3785024
13	24.6	2.3	0.0	chr7	152436347	152436389	(6909584)	+	(GCTC)n	Simple_repeat	1	44	(0)	3785121
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
1638	15.5	17.3	3.0	chr7	152553720	152554084	(6791889)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3785436
182	29.4	8.6	9.6	chr7	152554154	152554352	(6791621)	C	L2	LINE/L2	(355)	3064	2868	3785437
593	29.7	8.9	4.1	chr7	152759225	152759543	(6586430)	C	L2a	LINE/L2	(0)	3426	3091	3785944
13	19.5	0.0	2.7	chr7	152759662	152759698	(6586275)	+	G-rich	Low_complexity	1	37	(0)	3785945
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
38564	2.9	1.0	0.1	chr7	153409398	153413807	(5932166)	C	HERV-Fc1-int	LTR/ERV1	(176)	4453	1	3786891
2931	3.8	0.0	0.0	chr7	153413808	153414153	(5931820)	C	HERV-Fc1_LTR1	LTR/ERV1	(0)	346	1	3786891
710	24.1	3.6	1.9	chr7	153414228	153414505	(5931468)	C	L1MD3	LINE/L1	(0)	7995	7784	3786892
325	32.6	3.8	1.7	chr7	153414514	153414744	(5931229)	C	L1MEc	LINE/L1	(6123)	277	42	3786888
4089	5.9	1.7	0.4	chr7	154676662	154677185	(4668788)	C	HERV1_LTRd	LTR/ERV1	(4)	531	1	3788600
14	27.5	2.9	2.8	chr7	155003419	155003487	(4342486)	+	G-rich	Low_complexity	1	71	(0)	3789016
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
819	14.9	0.0	0.0	chr7	155323768	155323901	(4022072)	C	Tigger1	DNA/TcMar-Tigger	(180)	2238	2105	3789510
401	26.3	3.3	0.0	chr7	155324002	155324119	(4021854)	+	MER94	DNA/hAT-Blackjack	2	123	(11)	3789511
1641	28.3	5.8	1.0	chr7	156895761	156896359	(2449614)	+	L1ME3E	LINE/L1	5331	5962	(280)	3791506
1014	15.9	4.1	0.5	chr7	156896360	156896548	(2449425)	C	THE1D	LTR/ERVL-MaLR	(0)	381	186	3791507
2432	7.6	0.0	1.0	chr7	156898386	156898686	(2447287)	+	AluY	SINE/Alu	1	298	(13)	3791511
309	33.8	15.1	4.3	chr7	156898687	156898817	(2447156)	+	L2a	LINE/L2	3258	3421	(5)	3791510
597	32.5	12.6	0.0	chr7	156898857	156899084	(2446889)	C	MIRb	SINE/MIR	(7)	261	1	3791512
2135	6.2	2.9	1.1	chr7	156949219	156949490	(2396483)	C	AluSx	SINE/Alu	(35)	277	1	3791613
566	13.2	0.0	0.0	chr7	157138189	157138271	(2207702)	+	Tigger5b	DNA/TcMar-Tigger	386	468	(4)	3791935
14	18.2	8.6	1.6	chr7	157138291	157138348	(2207625)	+	(GTATAT)n	Simple_repeat	1	63	(0)	3791936
1468	15.5	0.0	0.5	chr7	157250404	157250622	(2095351)	C	AluJo	SINE/Alu	(94)	218	1	3792131
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
7605	6.7	1.0	0.2	chr7	158834549	158835506	(510467)	+	LTR13A	LTR/ERVK	1	966	(0)	3793765
614	17.1	0.0	5.1	chr7	158835507	158835529	(510444)	+	MLT1A1	LTR/ERVL-MaLR	406	428	(0)	3793762
331	24.6	5.4	11.6	chr7	158835544	158835681	(510292)	+	L1MC4	LINE/L1	7861	7989	(53)	3793760
375	21.6	5.8	1.0	chr7	158864156	158864253	(481720)	C	LTR56	LTR/ERV1	(342)	103	1	3793810
7628	12.1	5.6	2.4	chr7	158975901	158977135	(368838)	+	MER52C	LTR/ERV1	1	1276	(2)	3793978
1229	20.7	5.7	2.8	chr7	158977136	158977349	(368624)	+	L1MC1	LINE/L1	6102	6324	(9)	3793977
3916	20.5	4.3	2.4	chr7	158977735	158978610	(367363)	C	L1MB3	LINE/L1	(26)	6157	5265	3793979
13	22.5	2.0	3.9	chr8	11201987	11202036	(133936600)	+	(TCTTTT)n	Simple_repeat	1	51	(0)	3809245
326	25.0	1.2	2.3	chr8	11736324	11736409	(133402227)	C	MIR3	SINE/MIR	(34)	174	90	3810076
376	17.7	0.0	2.5	chr8	11736664	11736744	(133401892)	+	Charlie15a	DNA/hAT-Charlie	133	211	(13)	3810077
296	27.5	5.2	2.1	chr8	11736819	11736911	(133401725)	C	MIR3	SINE/MIR	(27)	181	86	3810078
2210	5.9	4.1	1.8	chr8	11769122	11769407	(133369229)	+	AluSx	SINE/Alu	1	293	(19)	3810129
2304	10.8	0.0	1.6	chr8	11804595	11804908	(133333728)	C	AluSx1	SINE/Alu	(3)	309	1	3810182
1676	17.9	0.3	2.9	chr8	11804909	11805215	(133333421)	C	AluJr	SINE/Alu	(13)	299	1	3810183
15	22.6	3.2	4.7	chr8	12755437	12755498	(132383138)	+	(CGC)n	Simple_repeat	1	64	(0)	3811506
14	24.9	3.9	0.0	chr8	12755556	12755607	(132383029)	+	G-rich	Low_complexity	1	54	(0)	3811507
16	13.1	0.0	0.0	chr8	17027213	17027237	(128111399)	+	(C)n	Simple_repeat	1	25	(0)	3817596
24	18.2	2.4	6.9	chr8	17027418	17027516	(128111120)	+	(GGC)n	Simple_repeat	1	94	(0)	3817597
294	24.7	6.1	6.1	chr8	17922388	17922486	(127216150)	+	MIR3	SINE/MIR	87	185	(23)	3818942
566	21.0	7.2	8.1	chr8	19779604	19779800	(125358836)	C	MER20	DNA/hAT-Charlie	(3)	216	22	3821772
25	24.4	2.5	1.2	chr8	21919670	21919748	(123218888)	+	(GGC)n	Simple_repeat	1	81	(0)	3825287
19	12.8	0.0	6.2	chr8	22056553	22056603	(123082033)	+	(GTGCGT)n	Simple_repeat	1	47	(0)	3825500
14	31.7	1.6	0.0	chr8	22109394	22109455	(123029181)	+	(GCGGAA)n	Simple_repeat	1	63	(0)	3825592
281	34.8	10.1	2.3	chr8	22135186	22135513	(123003123)	C	L2c	LINE/L2	(52)	3335	3002	3825625
24	30.6	1.9	2.8	chr8	22164682	22164786	(122973850)	+	GA-rich	Low_complexity	1	107	(0)	3825671
26	0.0	3.0	2.9	chr8	22164945	22164977	(122973659)	+	(GCCCGCG)n	Simple_repeat	1	34	(0)	3825672
18	19.6	0.0	4.0	chr8	22165021	22165070	(122973566)	+	(CCCGG)n	Simple_repeat	1	50	(0)	3825673
29	31.5	1.6	5.8	chr8	22165128	22165313	(122973323)	+	G-rich	Low_complexity	1	189	(0)	3825674
178	19.5	3.9	3.4	chr8	22599016	22599525	(122539111)	+	(CCTCT)n	Simple_repeat	1	530	(0)	3826527
15	25.6	0.0	4.9	chr8	22599658	22599718	(122538918)	+	G-rich	Low_complexity	1	61	(0)	3826528
331	35.6	1.7	0.0	chr8	23287816	23287930	(121850706)	+	MIRb	SINE/MIR	23	139	(129)	3827672
304	13.2	3.6	0.0	chr8	23457015	23457067	(121681569)	+	Charlie29a	DNA/hAT-Charlie	665	719	(0)	3827938
12	7.1	5.9	5.6	chr8	23457135	23457168	(121681468)	+	A-rich	Low_complexity	1	36	(0)	3827939
20	25.4	4.9	1.2	chr8	23457448	23457528	(121681108)	+	(GCCC)n	Simple_repeat	1	85	(0)	3827940
17	19.8	3.2	4.6	chr8	26291426	26291488	(118847148)	+	(CCGCC)n	Simple_repeat	1	65	(0)	3832499
26	20.3	0.0	1.7	chr8	26291539	26291598	(118847038)	+	(CGC)n	Simple_repeat	1	60	(0)	3832500
22	18.5	2.2	4.4	chr8	26292045	26292113	(118846523)	+	G-rich	Low_complexity	1	67	(0)	3832501
439	32.9	3.4	1.7	chr8	27315755	27315927	(117822709)	+	MIR3	SINE/MIR	33	208	(0)	3834170
433	17.5	1.4	2.0	chr8	27839356	27839467	(117299169)	C	MER41B	LTR/ERV1	(422)	212	1	3835078
3682	11.3	6.2	0.2	chr8	27839533	27840091	(117298545)	C	MER41E	LTR/ERV1	(0)	595	1	3835079
18	17.8	0.0	0.0	chr8	27840375	27840412	(117298224)	+	(ATG)n	Simple_repeat	1	38	(0)	3835080
21	23.9	3.6	3.5	chr8	28385626	28385709	(116752927)	+	G-rich	Low_complexity	1	87	(0)	3836023
17	0.0	0.0	0.0	chr8	28386490	28386508	(116752128)	+	(CA)n	Simple_repeat	1	19	(0)	3836025
302	24.8	14.2	7.0	chr8	28411265	28411576	(116727060)	+	L1ME4a	LINE/L1	5775	6112	(12)	3836083
16	28.6	1.7	0.0	chr8	28890493	28890551	(116248085)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3837025
12	7.2	10.3	0.0	chr8	28890577	28890605	(116248031)	+	(CCCT)n	Simple_repeat	1	32	(0)	3837026
13	15.8	2.7	2.6	chr8	29262702	29262738	(115875898)	+	(GGCGCA)n	Simple_repeat	1	38	(0)	3837622
24	19.2	0.0	0.0	chr8	29263113	29263165	(115875471)	+	G-rich	Low_complexity	1	53	(0)	3837623
15	0.0	0.0	0.0	chr8	30156938	30156954	(114981682)	+	(AC)n	Simple_repeat	1	17	(0)	3839162
3127	15.9	3.2	5.1	chr8	30156958	30157588	(114981048)	C	L1PB4	LINE/L1	(12)	6144	5526	3839163
1761	10.8	0.4	2.2	chr8	37900022	37900289	(107238347)	+	AluJo	SINE/Alu	31	293	(19)	3851173
385	22.1	13.7	0.9	chr8	37900777	37900885	(107237751)	C	MIR3	SINE/MIR	(84)	146	30	3851174
16	9.8	0.0	0.0	chr8	38152090	38152111	(106986525)	+	(G)n	Simple_repeat	1	22	(0)	3851753
200	21.4	11.1	0.0	chr8	38362164	38362219	(106776417)	+	L2a	LINE/L2	3346	3408	(18)	3852151
16	5.2	0.0	0.0	chr8	38362254	38362273	(106776363)	+	(G)n	Simple_repeat	1	20	(0)	3852152
27	22.6	4.8	2.8	chr8	38382201	38382303	(106756333)	+	(GCC)n	Simple_repeat	1	108	(0)	3852196
22740	11.6	1.2	0.4	chr8	39796058	39802438	(105336198)	C	L1PA8A	LINE/L1	(0)	6446	2	3854352
1249	25.3	4.2	5.8	chr8	39802440	39802871	(105335765)	+	MER31-int	LTR/ERV1	4300	4724	(212)	3854348
10806	6.6	0.1	0.3	chr8	39874053	39875482	(105263154)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	3854440
4088	5.3	0.6	2.9	chr8	39875483	39876006	(105262630)	+	MER9a3	LTR/ERVK	1	512	(0)	3854440
3411	22.9	9.6	10.1	chr8	41424914	41425166	(103713470)	+	L1ME2z	LINE/L1	5292	5566	(878)	3856962
1807	13.5	8.7	6.5	chr8	41425167	41425325	(103713311)	+	THE1D	LTR/ERVL-MaLR	1	187	(194)	3856968
41	4.8	0.0	0.0	chr8	41425326	41425369	(103713267)	+	(TC)n	Simple_repeat	1	44	(0)	3856969
1807	13.5	8.7	6.5	chr8	41425370	41425538	(103713098)	+	THE1D	LTR/ERVL-MaLR	188	343	(38)	3856968
2285	10.6	0.3	0.6	chr8	41425539	41425849	(103712787)	C	AluSx1	SINE/Alu	(2)	310	1	3856970
889	9.4	0.3	0.0	chr8	41529612	41529737	(103608899)	C	FLAM_C	SINE/Alu	(82)	220	14	3857157
181	30.2	4.0	5.0	chr8	41822929	41823029	(103315607)	+	MIRb	SINE/MIR	89	188	(80)	3857658
1770	13.5	0.0	1.9	chr8	41823509	41823767	(103314869)	+	AluJr	SINE/Alu	33	286	(26)	3857659
354	23.7	10.4	2.8	chr8	41823780	41823950	(103314686)	C	L1ME3C	LINE/L1	(0)	6123	5936	3857660
2138	9.3	0.0	7.5	chr8	42274524	42274855	(102863781)	C	AluSq2	SINE/Alu	(4)	309	3	3858499
2277	12.6	0.0	0.0	chr8	42274866	42275175	(102863461)	C	AluSx	SINE/Alu	(1)	311	2	3858500
2001	12.8	0.3	0.3	chr8	42385121	42385409	(102753227)	+	AluJo	SINE/Alu	12	300	(12)	3858696
298	19.0	18.8	2.6	chr8	42385789	42385939	(102752697)	C	L1ME4a	LINE/L1	(4)	6120	5940	3858697
2580	10.7	7.2	1.7	chr8	43055009	43055428	(102083208)	C	MER4D1	LTR/ERV1	(0)	900	456	3860027
811	8.4	0.0	6.3	chr8	43055459	43055585	(102083051)	C	MER4D1	LTR/ERV1	(491)	119	1	3860027
1573	16.5	3.9	0.0	chr8	43055662	43055934	(102082702)	C	AluJb	SINE/Alu	(26)	286	3	3860028
2160	11.2	0.0	0.7	chr8	53974545	53974829	(91163807)	C	AluSq2	SINE/Alu	(30)	283	1	3870239
325	30.7	14.4	2.1	chr8	53975127	53975362	(91163274)	+	L1ME4a	LINE/L1	5820	6089	(35)	3870240
2422	8.3	0.0	0.3	chr8	54022731	54023018	(91115618)	C	AluSc	SINE/Alu	(21)	288	2	3870337
2434	7.4	2.9	0.0	chr8	54023046	54023342	(91115294)	+	AluSq2	SINE/Alu	1	306	(7)	3870338
10107	4.0	2.4	8.6	chr8	54084968	54086444	(91052192)	+	SVA_B	Retroposon/SVA	1	1383	(0)	3870467
5691	13.2	14.2	1.6	chr8	55544645	55545718	(89592918)	+	MER11B	LTR/ERVK	1	1232	(4)	3872519
913	15.0	0.0	0.0	chr8	55853044	55853176	(89285460)	C	FLAM_C	SINE/Alu	(10)	133	1	3873046
1018	14.8	5.1	1.9	chr8	55853498	55853704	(89284932)	+	MER74A	LTR/ERVL	149	362	(196)	3873047
484	30.2	4.7	2.7	chr8	55920481	55920667	(89217969)	C	MIRb	SINE/MIR	(53)	215	25	3873199
1930	9.1	2.4	10.4	chr8	55920679	55920996	(89217640)	C	AluSx	SINE/Alu	(20)	292	1	3873200
31	0.0	3.3	0.0	chr8	55939458	55939487	(89199149)	+	(AG)n	Simple_repeat	1	31	(0)	3873239
243	25.0	2.4	1.2	chr8	55939828	55939908	(89198728)	C	Kanga11a	DNA/TcMar-Tc2	(886)	84	3	3873240
3854	17.1	5.8	1.7	chr8	56027905	56028658	(89109978)	+	L1MC3	LINE/L1	6837	7623	(162)	3873399
1968	11.9	2.0	2.7	chr8	56028681	56028975	(89109661)	+	AluJo	SINE/Alu	18	310	(2)	3873400
40	0.0	0.0	0.0	chr8	58553556	58553592	(86585044)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	3876759
22	13.1	0.0	2.3	chr8	60679205	60679248	(84459388)	+	G-rich	Low_complexity	1	44	(0)	3879592
11	21.7	7.3	1.7	chr8	60679281	60679335	(84459301)	+	(CCGGCGC)n	Simple_repeat	1	59	(0)	3879593
13	20.9	2.4	2.4	chr8	60679348	60679388	(84459248)	+	(GCG)n	Simple_repeat	1	42	(0)	3879594
21	12.9	3.6	5.2	chr8	60679596	60679651	(84458985)	+	(GGC)n	Simple_repeat	1	58	(0)	3879595
44	20.9	2.8	4.1	chr8	60680315	60680457	(84458179)	+	G-rich	Low_complexity	1	147	(0)	3879596
19	19.2	0.0	0.0	chr8	60923343	60923378	(84215258)	+	G-rich	Low_complexity	1	36	(0)	3879892
237	15.5	4.9	4.9	chr8	60923521	60923581	(84215055)	C	L1MC5a	LINE/L1	(1)	2776	2716	3879893
604	19.9	2.8	14.9	chr8	60923586	60923786	(84214850)	C	MER5A	DNA/hAT-Charlie	(0)	189	14	3879894
654	23.4	8.6	5.3	chr8	61062942	61063167	(84075469)	C	MIRb	SINE/MIR	(16)	252	19	3880112
249	30.3	11.4	10.9	chr8	61063134	61063260	(84075376)	C	L2c	LINE/L2	(64)	3323	3182	3880113
53	2.0	0.0	0.0	chr8	61063261	61063310	(84075326)	+	(GA)n	Simple_repeat	1	50	(0)	3880114
249	30.3	11.4	10.9	chr8	61063311	61063567	(84075069)	C	L2c	LINE/L2	(206)	3181	2938	3880113
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
563	0.0	0.0	18.0	chr8	66113988	66114076	(79024560)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886878
588	6.8	0.0	0.0	chr8	66114189	66114261	(79024375)	+	tRNA-Ala-GCY	tRNA	1	73	(3)	3886879
17	22.5	0.0	0.0	chr8	66935073	66935108	(78203528)	+	(C)n	Simple_repeat	1	36	(0)	3888397
1816	15.4	0.7	2.3	chr8	66935114	66935418	(78203218)	C	LTR39	LTR/ERV1	(260)	523	224	3888398
16	28.6	1.4	2.8	chr8	70402238	70402308	(74736328)	+	(GGTGGA)n	Simple_repeat	1	72	(0)	3893734
16	16.7	0.0	4.5	chr8	70403638	70403681	(74734955)	+	(CGCCCCC)n	Simple_repeat	1	44	(0)	3893735
35	0.0	0.0	0.0	chr8	70403848	70403879	(74734757)	+	(CCT)n	Simple_repeat	1	32	(0)	3893736
963	19.9	19.3	8.1	chr8	72134231	72134652	(73003984)	C	LTR21A	LTR/ERV1	(0)	481	1	3896096
809	25.8	1.2	4.0	chr8	72134711	72135079	(73003557)	+	L1ME1	LINE/L1	5824	6334	(0)	3896097
40	34.2	3.0	0.0	chr8	73315110	73315278	(71823358)	+	(TC)n	Simple_repeat	1	174	(0)	3897775
21	17.8	0.0	0.0	chr8	73627206	73627243	(71511393)	+	G-rich	Low_complexity	1	38	(0)	3898236
19	16.9	0.0	0.0	chr8	79768902	79768934	(65369702)	+	(C)n	Simple_repeat	1	33	(0)	3906482
853	23.3	18.4	7.4	chr8	80028451	80028675	(65109961)	+	MLT1D	LTR/ERVL-MaLR	1	278	(227)	3906891
1772	13.7	4.6	4.6	chr8	80028676	80028982	(65109654)	+	AluJb	SINE/Alu	2	308	(4)	3906892
853	23.3	18.4	7.4	chr8	80028983	80029201	(65109435)	+	MLT1D	LTR/ERVL-MaLR	279	505	(0)	3906891
162	10.5	0.0	0.0	chr8	81842344	81842580	(63296056)	+	(GAGA)n	Simple_repeat	1	237	(0)	3909852
1320	29.2	10.9	5.8	chr8	85127463	85128297	(60010339)	C	L1M6	LINE/L1	(5611)	885	3	3914076
13	12.2	3.7	0.0	chr8	85128417	85128443	(60010193)	+	(CCA)n	Simple_repeat	1	28	(0)	3914077
252	36.7	8.1	7.0	chr8	85128591	85128848	(60009788)	+	L2	LINE/L2	2348	2608	(811)	3914078
14	26.9	2.0	0.0	chr8	86343411	86343459	(58795177)	+	(CTCCAC)n	Simple_repeat	1	50	(0)	3915918
308	28.8	12.7	3.6	chr8	90646835	90647083	(54491553)	+	L2c	LINE/L2	2174	2448	(971)	3921469
4362	13.3	0.8	0.2	chr8	93873619	93874248	(51264388)	C	MER41B	LTR/ERV1	(0)	634	1	3925971
3659	15.7	6.1	4.2	chr8	93874249	93874676	(51263960)	C	LTR8A	LTR/ERV1	(2)	725	316	3925972
20	10.5	2.2	4.3	chr8	93917509	93917553	(51221083)	+	G-rich	Low_complexity	1	46	(0)	3926056
18	0.0	7.3	6.8	chr8	94896244	94896292	(50242344)	+	(CCG)n	Simple_repeat	1	49	(0)	3927774
18	29.3	0.0	0.0	chr8	94949388	94949445	(50189191)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3927879
2025	14.3	0.6	2.9	chr8	94959525	94959839	(50178797)	C	AluJb	SINE/Alu	(4)	308	1	3927895
421	26.9	8.2	5.1	chr8	94991379	94991554	(50147082)	+	MIRb	SINE/MIR	29	210	(58)	3927970
1531	23.7	6.3	6.5	chr8	94991576	94992116	(50146520)	C	L1ME4b	LINE/L1	(83)	809	270	3927971
2191	12.2	0.3	0.3	chr8	94992206	94992501	(50146135)	+	AluSx	SINE/Alu	1	296	(16)	3927972
16	9.3	0.0	0.0	chr8	95208184	95208206	(49930430)	+	(G)n	Simple_repeat	1	23	(0)	3928403
188	36.7	3.2	1.1	chr8	95208628	95208718	(49929918)	C	MamRTE1	LINE/RTE-BovB	(3656)	156	64	3928404
48	27.4	4.2	2.0	chr8	95208794	95208984	(49929652)	+	(CT)n	Simple_repeat	1	199	(0)	3928405
788	0.0	0.0	0.0	chr8	95269657	95269738	(49868898)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3928507
32	3.2	0.0	0.0	chr8	95269957	95269988	(49868648)	+	(GA)n	Simple_repeat	1	32	(0)	3928508
182	22.4	0.0	5.8	chr8	95270235	95270286	(49868350)	+	MIRc	SINE/MIR	213	261	(7)	3928509
2353	25.0	10.1	0.4	chr8	96775206	96775901	(48362735)	C	MER20B	DNA/hAT-Charlie	(12)	771	1	3930795
292	22.1	5.5	1.1	chr8	96775919	96776005	(48362631)	C	MLT1L	LTR/ERVL-MaLR	(517)	93	3	3930796
245	22.6	1.2	16.0	chr8	96776009	96776108	(48362528)	+	L2c	LINE/L2	3303	3387	(0)	3930797
359	25.4	8.0	0.0	chr8	97849654	97849779	(47288857)	+	LTR41B	LTR/ERVL	4	140	(561)	3932575
414	26.0	7.4	3.8	chr8	97850002	97850255	(47288381)	+	LTR41B	LTR/ERVL	501	747	(11)	3932575
306	22.7	8.3	14.1	chr8	97891063	97891190	(47247446)	C	L2c	LINE/L2	(18)	3369	3250	3932663
1577	15.6	15.9	10.7	chr8	97891273	97891325	(47247311)	C	Charlie1	DNA/hAT-Charlie	(0)	2781	2737	3932664
1997	13.9	0.7	0.0	chr8	97891326	97891637	(47246999)	C	AluJb	SINE/Alu	(0)	312	1	3932665
591	26.4	9.0	0.6	chr8	98306627	98306809	(46831827)	+	MIR3	SINE/MIR	3	202	(6)	3933488
36	21.3	0.9	6.0	chr8	98306975	98307089	(46831547)	+	(TTCC)n	Simple_repeat	1	116	(0)	3933489
7975	1.6	0.3	0.0	chr8	98307133	98308365	(46830271)	C	L1PA2	LINE/L1	(0)	6155	4935	3933490
22	10.5	0.0	0.0	chr8	98477700	98477730	(46660906)	+	(G)n	Simple_repeat	1	31	(0)	3933739
14	8.1	0.0	3.6	chr8	98477738	98477765	(46660871)	+	(GAAGG)n	Simple_repeat	1	28	(0)	3933740
739	15.4	19.0	3.3	chr8	98477795	98477975	(46660661)	C	MER20	DNA/hAT-Charlie	(0)	219	4	3933741
2218	9.6	0.7	0.4	chr8	98479206	98479486	(46659150)	+	AluSx1	SINE/Alu	1	282	(30)	3933743
16	5.2	0.0	0.0	chr8	98479487	98479506	(46659130)	+	(G)n	Simple_repeat	1	20	(0)	3933744
450	22.0	7.1	0.8	chr8	98479528	98479646	(46658990)	+	L1MEf	LINE/L1	242	368	(5941)	3933745
2229	21.8	10.4	1.5	chr8	98479661	98480391	(46658245)	+	L1MEf	LINE/L1	831	1634	(4781)	3933745
773	35.4	8.7	2.7	chr8	98540055	98540650	(46597986)	C	L3	LINE/CR1	(384)	3715	3081	3933810
1336	32.4	4.6	3.3	chr8	98540654	98541176	(46597460)	+	LTR67B	LTR/ERVL	12	543	(77)	3933811
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
12	0.0	8.0	3.7	chr8	100471800	100471824	(44666812)	+	(GTTT)n	Simple_repeat	1	27	(0)	3936852
13	16.3	0.0	5.3	chr8	100471822	100471859	(44666777)	+	G-rich	Low_complexity	1	38	(0)	3936853
14	18.0	2.5	2.4	chr8	100952688	100952727	(44185909)	+	(GCGCGG)n	Simple_repeat	1	41	(0)	3937836
13	24.0	0.0	2.4	chr8	100953004	100953044	(44185592)	+	(GCCGG)n	Simple_repeat	1	41	(0)	3937837
12	25.6	2.1	2.0	chr8	101080919	101080966	(44057670)	+	(CCTCCC)n	Simple_repeat	1	49	(0)	3938108
680	27.6	7.6	1.1	chr8	101081336	101081553	(44057083)	+	MIRb	SINE/MIR	31	268	(0)	3938109
35	0.0	0.0	0.0	chr8	101097838	101097867	(44040769)	+	(GA)n	Simple_repeat	1	30	(0)	3938140
3517	17.7	8.1	6.4	chr8	102282682	102283512	(42855124)	+	L1MB8	LINE/L1	5330	6169	(9)	3940066
14	23.2	3.9	1.9	chr8	102411542	102411593	(42727043)	+	(CTCC)n	Simple_repeat	1	54	(0)	3940261
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
21	22.1	0.0	1.8	chr8	102655972	102656027	(42482609)	+	(CGCCCCC)n	Simple_repeat	1	56	(0)	3940829
12	12.0	3.7	0.0	chr8	102656127	102656153	(42482483)	+	(CCGCT)n	Simple_repeat	1	28	(0)	3940830
1910	10.5	8.6	0.4	chr8	102787128	102787404	(42351232)	C	AluSx1	SINE/Alu	(9)	303	2	3941109
1239	22.6	6.4	3.9	chr8	102787405	102787448	(42351188)	+	MLT1A	LTR/ERVL-MaLR	326	373	(1)	3941108
20	4.3	0.0	0.0	chr8	102787470	102787493	(42351143)	+	(G)n	Simple_repeat	1	24	(0)	3941110
691	21.7	13.7	1.3	chr8	102787511	102787739	(42350897)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	206	3941111
4880	12.2	0.1	6.9	chr8	107755000	107755839	(37382797)	+	LTR1	LTR/ERV1	1	783	(0)	3948398
22	18.8	5.1	3.6	chr8	115668447	115668525	(29470111)	+	(CGCGCCC)n	Simple_repeat	1	83	(0)	3958965
31	3.3	0.0	0.0	chr8	115668718	115668748	(29469888)	+	(AG)n	Simple_repeat	1	31	(0)	3958966
15	20.6	0.0	2.4	chr8	116874649	116874689	(28263947)	+	G-rich	Low_complexity	1	41	(0)	3960760
19	11.6	0.0	0.0	chr8	118622163	118622190	(26516446)	+	(G)n	Simple_repeat	1	28	(0)	3963593
54	0.0	0.0	0.0	chr8	123060832	123060877	(22077759)	+	(AC)n	Simple_repeat	1	46	(0)	3971082
40	2.2	0.0	0.0	chr8	123060878	123060923	(22077713)	+	(TC)n	Simple_repeat	1	46	(0)	3971083
3719	12.6	6.0	2.5	chr8	123412759	123413395	(21725241)	+	MER67B	LTR/ERV1	1	661	(0)	3971810
688	24.4	2.2	5.9	chr8	123413400	123413586	(21725050)	C	MIR	SINE/MIR	(29)	233	54	3971811
842	28.8	2.5	0.4	chr8	123417335	123417571	(21721065)	C	MIR	SINE/MIR	(14)	248	7	3971818
2654	15.6	11.0	15.1	chr8	124110530	124111270	(21027366)	C	MER67C	LTR/ERV1	(4)	707	1	3973112
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
20	15.6	0.0	4.3	chr8	126876586	126876632	(18262004)	+	(TTCT)n	Simple_repeat	1	47	(0)	3978350
184	28.7	0.9	10.7	chr8	127898905	127899025	(17239611)	C	LFSINE_Vert	SINE/tRNA	(280)	179	71	3980357
186	30.2	0.0	0.0	chr8	127899216	127899278	(17239358)	+	MIRc	SINE/MIR	77	139	(129)	3980358
288	24.6	0.0	0.0	chr8	127988622	127988690	(17149946)	C	hAT-N1_Mam	DNA/hAT-Tip100?	(68)	272	204	3980554
1603	20.6	1.7	2.3	chr8	129923989	129924289	(15214347)	+	AluJo	SINE/Alu	1	299	(13)	3983958
19	8.2	0.0	0.0	chr8	129924292	129924317	(15214319)	+	(G)n	Simple_repeat	1	26	(0)	3983959
334	29.4	7.5	1.8	chr8	129924494	129924656	(15213980)	C	LTR78	LTR/ERV1	(0)	1304	1132	3983960
1317	17.6	0.4	5.0	chr8	129924686	129924923	(15213713)	+	AluJb	SINE/Alu	2	228	(84)	3983961
567	17.3	0.9	3.2	chr8	130015407	130015566	(15123070)	C	MIRc	SINE/MIR	(117)	151	4	3984184
13	13.1	0.0	0.0	chr8	130016424	130016448	(15122188)	+	(GCC)n	Simple_repeat	1	25	(0)	3984185
20	10.1	0.0	0.0	chr8	130016501	130016532	(15122104)	+	(GCA)n	Simple_repeat	1	32	(0)	3984186
312	22.3	6.8	2.6	chr8	130016850	130016982	(15121654)	C	MIR3	SINE/MIR	(95)	173	29	3984187
2298	12.3	3.6	3.3	chr8	130072229	130072591	(15066045)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3984315
3260	14.2	4.9	1.7	chr8	130072592	130072793	(15065843)	+	MER21A	LTR/ERVL	495	700	(231)	3984309
37	0.0	0.0	0.0	chr8	130072794	130072825	(15065811)	+	(TG)n	Simple_repeat	1	32	(0)	3984316
3260	14.2	4.9	1.7	chr8	130072826	130073046	(15065590)	+	MER21A	LTR/ERVL	701	924	(7)	3984309
564	31.0	7.5	4.6	chr8	130073051	130073141	(15065495)	C	L2	LINE/L2	(993)	2426	2331	3984317
33	0.0	0.0	0.0	chr8	134712719	134712749	(10425887)	+	(GCGGCCG)n	Simple_repeat	1	31	(0)	3992732
14	14.9	5.4	0.0	chr8	134712801	134712837	(10425799)	+	(CCCCAC)n	Simple_repeat	1	39	(0)	3992733
227	26.9	8.8	1.9	chr8	134713977	134714082	(10424554)	+	MER113	DNA/hAT-Charlie	314	427	(94)	3992737
214	30.2	5.0	2.0	chr8	134714336	134714433	(10424203)	+	L2c	LINE/L2	3253	3353	(34)	3992738
534	26.7	8.8	1.1	chr8	134714646	134714823	(10423813)	C	MIRc	SINE/MIR	(67)	201	9	3992739
12	20.4	2.4	2.4	chr8	134831774	134831814	(10306822)	+	(CCCGAC)n	Simple_repeat	1	42	(0)	3992944
14	18.0	8.6	1.6	chr8	134832022	134832079	(10306557)	+	(CGCCCCAG)n	Simple_repeat	1	63	(0)	3992945
1483	21.4	9.3	0.9	chr8	134843026	134843359	(10295277)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3992968
14	12.7	0.0	0.0	chr8	134843382	134843407	(10295229)	+	(CTA)n	Simple_repeat	1	26	(0)	3992969
202	25.4	1.5	0.0	chr8	134843422	134843488	(10295148)	C	MIR	SINE/MIR	(11)	251	184	3992970
229	23.5	10.5	2.9	chr8	140343734	140343803	(4794833)	C	MER5A	DNA/hAT-Charlie	(50)	139	64	4001779
186	30.8	16.1	0.8	chr8	140465169	140465299	(4673337)	+	L2c	LINE/L2	3002	3156	(231)	4002005
16	11.6	2.4	4.8	chr8	140465483	140465523	(4673113)	+	(TATATG)n	Simple_repeat	1	42	(0)	4002006
356	20.0	10.1	2.3	chr8	140465639	140465766	(4672870)	C	L1MC4	LINE/L1	(330)	7712	7574	4002007
541	18.7	8.8	0.0	chr8	140465771	140465904	(4672732)	+	MER65D	LTR/ERV1	1	147	(326)	4002008
19	8.2	0.0	0.0	chr8	140597467	140597492	(4541144)	+	(C)n	Simple_repeat	1	26	(0)	4002234
14	13.7	7.5	0.0	chr8	140597493	140597505	(4541131)	+	(GCCCCCCC)n	Simple_repeat	2	43	(0)	4002235
15	21.8	5.7	0.0	chr8	140597612	140597664	(4540972)	+	(TCAGCT)n	Simple_repeat	1	56	(0)	4002236
4849	12.2	2.0	1.8	chr8	141097486	141098368	(4040268)	C	L1MA4A	LINE/L1	(115)	6188	5304	4003176
309	22.4	3.0	6.7	chr8	141098402	141098506	(4040130)	C	MIR3	SINE/MIR	(6)	202	102	4003177
385	28.5	12.3	5.2	chr8	141098659	141098786	(4039850)	+	MIRb	SINE/MIR	7	151	(117)	4003178
2483	3.8	3.7	0.0	chr8	141098787	141099075	(4039561)	+	AluY	SINE/Alu	1	300	(11)	4003179
358	28.1	13.9	3.0	chr8	141356026	141356223	(3782413)	+	MIRb	SINE/MIR	21	243	(25)	4003529
421	26.8	20.3	0.0	chr8	141356620	141356776	(3781860)	C	MER117	DNA/hAT-Charlie	(0)	197	1	4003530
61	22.0	4.2	2.0	chr8	141415621	141415812	(3722824)	+	G-rich	Low_complexity	1	200	(0)	4003615
18	19.9	0.0	0.0	chr8	141434131	141434165	(3704471)	+	G-rich	Low_complexity	1	35	(0)	4003634
23	25.3	0.0	3.8	chr8	141472993	141473072	(3665564)	+	(GCCCCC)n	Simple_repeat	1	80	(0)	4003679
231	28.1	5.3	0.0	chr8	141473181	141473269	(3665367)	C	Charlie4a	DNA/hAT-Charlie	(234)	274	181	4003680
2168	11.5	0.3	3.8	chr8	141473599	141473912	(3664724)	C	AluSq	SINE/Alu	(10)	303	1	4003681
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
26	3.2	0.0	2.9	chr8	143211778	143211811	(1926825)	+	(GGGCG)n	Simple_repeat	1	34	(0)	4005912
258	37.1	4.9	0.0	chr8	143212094	143212209	(1926427)	C	MIR	SINE/MIR	(130)	132	11	4005913
281	30.3	6.6	0.0	chr8	143212232	143212373	(1926263)	C	MIR3	SINE/MIR	(53)	155	4	4005914
14	21.1	2.6	0.0	chr8	143331880	143331918	(1806718)	+	(GGCGG)n	Simple_repeat	1	40	(0)	4006079
16	13.6	5.6	5.3	chr8	143430381	143430434	(1708202)	+	(GCGCCC)n	Simple_repeat	1	57	(0)	4006203
23	15.6	5.1	1.6	chr8	143430495	143430553	(1708083)	+	(GGC)n	Simple_repeat	1	62	(0)	4006204
12	27.2	2.0	2.0	chr8	143541484	143541533	(1597103)	+	(GCGGA)n	Simple_repeat	1	51	(0)	4006298
2573	18.9	2.6	5.5	chr8	143542021	143542109	(1596527)	+	L1MB3	LINE/L1	5523	5615	(568)	4006299
2264	9.4	0.0	2.6	chr8	143634989	143635297	(1503339)	+	AluSc5	SINE/Alu	1	301	(8)	4006432
828	24.7	3.1	6.6	chr8	143635298	143635393	(1503243)	+	Charlie2b	DNA/hAT-Charlie	1972	2067	(715)	4006431
1151	13.5	2.6	2.1	chr8	143635497	143635688	(1502948)	+	AluJb	SINE/Alu	115	307	(5)	4006433
28	22.1	0.0	0.0	chr8	143716889	143716946	(1421690)	+	(TG)n	Simple_repeat	1	58	(0)	4006573
644	26.4	24.3	1.9	chr8	143716948	143717418	(1421218)	C	L2c	LINE/L2	(313)	3113	2528	4006574
14	7.8	0.0	6.5	chr8	143829032	143829062	(1309574)	+	(CGCCC)n	Simple_repeat	1	31	(0)	4006715
217	32.4	5.7	6.9	chr8	143836265	143836467	(1302169)	C	L2b	LINE/L2	(168)	3207	3013	4006725
23	23.3	0.0	0.0	chr8	143836680	143836729	(1301907)	+	G-rich	Low_complexity	1	50	(0)	4006726
12	18.9	8.9	1.6	chr8	143836768	143836823	(1301813)	+	(GGATGCA)n	Simple_repeat	1	61	(0)	4006727
15	16.1	12.7	0.0	chr8	143876840	143876902	(1261734)	+	(GCCAGG)n	Simple_repeat	1	71	(0)	4006787
13	16.2	0.0	5.3	chr8	143877047	143877084	(1261552)	+	(GGAGCAG)n	Simple_repeat	1	38	(0)	4006788
14	17.6	0.0	0.0	chr8	143877211	143877242	(1261394)	+	(CCCTGC)n	Simple_repeat	1	32	(0)	4006789
12	31.8	1.7	1.6	chr8	143952948	143953007	(1185629)	+	(CCCGC)n	Simple_repeat	1	61	(0)	4006871
32	0.0	3.0	0.0	chr8	143953444	143953476	(1185160)	+	(CCG)n	Simple_repeat	1	34	(0)	4006872
25	23.7	0.0	7.8	chr8	143990327	143990429	(1148207)	+	(CGG)n	Simple_repeat	1	103	(0)	4006926
242	22.5	7.5	9.0	chr8	144100771	144100840	(1037796)	+	L2a	LINE/L2	3090	3164	(262)	4007103
2446	6.1	1.0	0.0	chr8	144100841	144101134	(1037502)	C	AluSp	SINE/Alu	(16)	297	1	4007104
45	9.8	4.3	3.1	chr8	144336364	144336456	(802180)	+	(CTTC)n	Simple_repeat	1	97	(0)	4007463
17	27.7	2.4	7.1	chr8	144336660	144336783	(801853)	+	(GGCGCC)n	Simple_repeat	1	127	(0)	4007464
2640	3.9	0.0	0.0	chr8	144428784	144429088	(709548)	C	AluY	SINE/Alu	(6)	305	1	4007614
13	30.2	0.0	0.0	chr8	144467711	144467755	(670881)	+	(CAG)n	Simple_repeat	1	45	(0)	4007646
957	18.8	11.2	0.0	chr8	144755894	144756122	(382514)	+	MER39B	LTR/ERV1	1	258	(395)	4008043
7745	6.6	1.7	1.5	chr8	144949447	144950446	(188190)	+	LTR5B	LTR/ERVK	1	1002	(0)	4008354
20	16.7	2.5	0.0	chr9	2017375	2017414	(136377303)	+	(GT)n	Simple_repeat	1	41	(0)	4011562
60	0.0	0.0	0.0	chr9	3524828	3524878	(134869839)	+	(CA)n	Simple_repeat	1	51	(0)	4013730
15	4.3	4.2	0.0	chr9	3525231	3525254	(134869463)	+	(AAC)n	Simple_repeat	1	25	(0)	4013731
34	9.2	0.0	0.0	chr9	3525927	3526019	(134868698)	+	(AG)n	Simple_repeat	1	93	(0)	4013735
13	26.4	3.2	3.1	chr9	5628961	5629022	(132765695)	+	(GCGCG)n	Simple_repeat	1	64	(0)	4016814
17	14.2	0.0	0.0	chr9	5629194	5629224	(132765493)	+	(GCC)n	Simple_repeat	1	31	(0)	4016815
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
13	16.4	2.8	2.7	chr9	6008497	6008532	(132386185)	+	(CCCCG)n	Simple_repeat	1	37	(0)	4017400
4678	12.3	2.9	4.5	chr9	14007350	14008193	(124386524)	+	LTR1A2	LTR/ERV1	7	836	(1)	4028388
15	20.5	1.4	0.0	chr9	14030203	14030242	(124364475)	+	G-rich	Low_complexity	1	40	(0)	4028424
21	25.9	2.8	1.4	chr9	14314680	14314751	(124079966)	+	(CCT)n	Simple_repeat	1	74	(0)	4028786
16	0.0	0.0	0.0	chr9	32552175	32552192	(105842525)	+	(A)n	Simple_repeat	1	18	(0)	4053836
28	2.9	2.9	0.0	chr9	33817125	33817159	(104577558)	+	(CCCT)n	Simple_repeat	1	36	(0)	4056031
13	25.3	6.0	1.4	chr9	33817376	33817399	(104577318)	+	(CCCCCT)n	Simple_repeat	1	69	(0)	4056032
13	20.4	2.4	2.4	chr9	33817400	33817440	(104577277)	+	(CCT)n	Simple_repeat	1	42	(0)	4056033
21	3.7	0.0	0.0	chr9	33817729	33817756	(104576961)	+	(CCG)n	Simple_repeat	1	28	(0)	4056034
22	3.1	3.0	0.0	chr9	33818366	33818399	(104576318)	+	(GGGGGT)n	Simple_repeat	1	35	(0)	4056035
21	0.0	0.0	0.0	chr9	33818530	33818552	(104576165)	+	(A)n	Simple_repeat	1	23	(0)	4056036
1764	16.9	0.4	0.4	chr9	34158005	34158276	(104236441)	+	AluJo	SINE/Alu	11	282	(30)	4056864
363	23.5	16.1	10.5	chr9	34158277	34158401	(104236316)	+	L1ME3Cz	LINE/L1	213	326	(671)	4056863
1559	25.7	3.6	2.1	chr9	34158413	34158616	(104236101)	C	ERV3-16A3_I-int	LTR/ERVL	(1236)	3990	3787	4056865
1763	15.7	8.5	7.3	chr9	34158617	34159001	(104235716)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	4056866
1559	25.7	3.6	2.1	chr9	34159002	34159261	(104235456)	C	ERV3-16A3_I-int	LTR/ERVL	(1440)	3786	3519	4056865
7918	20.8	4.5	3.1	chr9	35021837	35024184	(103370533)	C	HERVH-int	LTR/ERV1	(4883)	2830	450	4058235
239	26.8	6.1	4.7	chr9	36666704	36666832	(101727885)	C	L3	LINE/CR1	(1091)	3008	2878	4061215
72	1.4	1.4	1.3	chr9	36666848	36666921	(101727796)	+	(TG)n	Simple_repeat	1	75	(0)	4061216
2492	10.7	0.0	0.7	chr9	36667147	36667455	(101727262)	C	AluSx1	SINE/Alu	(5)	307	1	4061217
19	18.9	0.0	0.0	chr9	37337380	37337415	(101057302)	+	(C)n	Simple_repeat	1	36	(0)	4062452
745	27.2	10.5	3.9	chr9	37422031	37422366	(100972351)	C	MLT1G3	LTR/ERVL-MaLR	(5)	590	230	4062641
2278	9.7	0.0	1.3	chr9	37466643	37466940	(100927777)	+	AluSx1	SINE/Alu	2	295	(17)	4062719
405	29.9	7.1	2.1	chr9	37467259	37467500	(100927217)	+	L1ME4b	LINE/L1	5457	5711	(2171)	4062720
2433	7.8	0.0	0.7	chr9	37467649	37467955	(100926762)	+	AluSg	SINE/Alu	1	305	(5)	4062721
1243	16.9	15.9	7.7	chr9	37753282	37753510	(100641207)	C	MER4D0	LTR/ERV1	(608)	264	2	4063318
15	16.2	0.0	10.2	chr9	38068449	38068507	(100326210)	+	(GAGGCG)n	Simple_repeat	1	59	(0)	4063871
14	11.8	8.1	0.0	chr9	38226936	38226972	(100167745)	+	G-rich	Low_complexity	1	40	(0)	4064195
16	21.7	0.0	0.0	chr9	38227060	38227091	(100167626)	+	G-rich	Low_complexity	1	32	(0)	4064196
14	10.0	6.2	0.0	chr9	69035827	69035858	(69358859)	+	(ACCCAG)n	Simple_repeat	1	34	(0)	4080839
12	11.1	3.2	3.1	chr9	70420323	70420353	(67974364)	+	(CCCGCG)n	Simple_repeat	1	32	(0)	4083114
2348	9.2	0.3	0.7	chr9	70629324	70629628	(67765089)	C	AluSq2	SINE/Alu	(1)	312	9	4083502
29	5.8	0.0	0.0	chr9	71768574	71768609	(66626108)	+	(CCT)n	Simple_repeat	1	36	(0)	4085192
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
11707	9.7	1.5	0.5	chr9	85288866	85289981	(53104736)	+	LTR12C	LTR/ERV1	3	1120	(459)	4105995
35	0.0	2.7	0.0	chr9	85289982	85290018	(53104699)	+	(GGGGGTGGG)n	Simple_repeat	1	38	(0)	4105996
11707	9.7	1.5	0.5	chr9	85290019	85290463	(53104254)	+	LTR12C	LTR/ERV1	1121	1579	(0)	4105995
12	23.6	0.0	0.0	chr9	85610190	85610224	(52784493)	+	A-rich	Low_complexity	1	35	(0)	4106446
272	25.4	7.6	1.6	chr9	86286682	86286932	(52107785)	+	L1M6	LINE/L1	986	1279	(5217)	4107654
565	21.5	8.6	1.6	chr9	86286971	86287164	(52107553)	+	L1M6	LINE/L1	1535	1743	(4753)	4107654
313	24.8	6.5	5.8	chr9	86287282	86287418	(52107299)	C	L1M6	LINE/L1	(4602)	1894	1757	4107655
748	22.5	4.0	2.9	chr9	87547350	87547523	(50847194)	+	MER3	DNA/hAT-Charlie	1	176	(33)	4109671
1453	18.7	9.0	8.8	chr9	87547524	87547578	(50847139)	C	MLT2D	LTR/ERVL	(0)	414	360	4109672
37	2.9	0.0	0.0	chr9	87547579	87547614	(50847103)	+	(GT)n	Simple_repeat	1	36	(0)	4109673
1453	18.7	9.0	8.8	chr9	87547615	87547968	(50846749)	C	MLT2D	LTR/ERVL	(55)	359	4	4109672
239	22.4	4.6	1.4	chr9	87712774	87713467	(50681250)	+	(GT)n	Simple_repeat	1	726	(0)	4109894
13	18.2	0.0	0.0	chr9	88092729	88092759	(50301958)	+	A-rich	Low_complexity	1	31	(0)	4110465
1034	20.6	5.9	2.7	chr9	88092867	88093188	(50301529)	+	LTR26	LTR/ERV1	277	589	(14)	4110466
14	32.2	0.0	1.6	chr9	91424464	91424526	(46970191)	+	(CGCGG)n	Simple_repeat	1	63	(0)	4115185
365	22.1	0.0	6.1	chr9	91908437	91908555	(46486162)	C	MIR	SINE/MIR	(5)	257	155	4115900
1655	16.8	3.0	3.6	chr9	91933687	91934020	(46460697)	+	L1MB5	LINE/L1	5843	6174	(0)	4115943
16	15.4	2.8	0.0	chr9	91934449	91934484	(46460233)	+	(ACCC)n	Simple_repeat	1	37	(0)	4115944
237	29.6	2.7	0.0	chr9	93095351	93095421	(45299296)	+	MIRc	SINE/MIR	77	149	(119)	4117709
17	9.2	5.7	0.0	chr9	93134286	93134320	(45260397)	+	(GCCC)n	Simple_repeat	1	37	(0)	4117770
381	32.4	10.1	0.0	chr9	93159728	93159897	(45234820)	+	MIRb	SINE/MIR	42	230	(38)	4117824
3321	13.2	10.2	5.4	chr9	93160252	93160395	(45234322)	+	L1MB7	LINE/L1	5110	5270	(876)	4117825
2341	8.7	0.0	1.0	chr9	93160396	93160695	(45234022)	C	AluSq	SINE/Alu	(16)	297	1	4117826
17	17.1	0.0	4.7	chr9	93576342	93576384	(44818333)	+	(CGG)n	Simple_repeat	1	43	(0)	4118328
15	16.6	0.0	10.3	chr9	94166924	94166981	(44227736)	+	G-rich	Low_complexity	1	58	(0)	4119126
19	6.2	5.9	0.0	chr9	94734051	94734084	(43660633)	+	(TTTA)n	Simple_repeat	1	36	(0)	4120199
3226	19.8	2.9	5.3	chr9	95432613	95433379	(42961338)	+	L1MB7	LINE/L1	5428	6175	(9)	4121228
2290	5.1	0.0	1.1	chr9	95433840	95434114	(42960603)	C	AluY	SINE/Alu	(39)	272	1	4121231
672	26.4	4.8	1.0	chr9	95434424	95434622	(42960095)	+	LTR16A	LTR/ERVL	57	263	(188)	4121232
14	16.4	7.3	0.0	chr9	95462985	95463025	(42931692)	+	(CACC)n	Simple_repeat	1	44	(0)	4121257
217	24.5	3.9	0.0	chr9	95504881	95504929	(42889788)	+	L2b	LINE/L2	3365	3415	(11)	4121295
21	16.2	2.8	6.8	chr9	96417538	96417608	(41977109)	+	(CCGC)n	Simple_repeat	1	73	(0)	4122831
2635	5.9	0.0	0.0	chr9	96778520	96778826	(41615891)	C	AluSx1	SINE/Alu	(5)	307	1	4123478
15	25.0	1.6	4.8	chr9	97984739	97984800	(40409917)	+	(GCC)n	Simple_repeat	1	63	(0)	4125548
653	28.4	12.3	1.9	chr9	98775170	98775481	(39619236)	+	L1ME4a	LINE/L1	5516	5864	(260)	4127166
246	31.2	12.3	0.0	chr9	99258866	99258993	(39135724)	+	MIR3	SINE/MIR	42	187	(21)	4128102
35	4.6	2.2	0.0	chr9	99820032	99820076	(38574641)	+	(CCCCG)n	Simple_repeat	1	46	(0)	4129130
2342	15.2	0.5	3.4	chr9	100036243	100036679	(38358038)	+	L1PA16	LINE/L1	5743	6166	(0)	4129457
3809	15.2	2.1	7.8	chr9	100036680	100036878	(38357839)	+	L1PA16	LINE/L1	5819	6020	(146)	4129459
5142	18.2	2.0	1.1	chr9	100036913	100037836	(38356881)	+	L1MA2	LINE/L1	11	943	(6622)	4129460
12	18.3	0.0	3.0	chr9	100427024	100427056	(37967661)	+	G-rich	Low_complexity	1	33	(0)	4130119
26	20.7	3.0	8.8	chr9	100427145	100427277	(37967440)	+	(CGG)n	Simple_repeat	1	137	(0)	4130120
18	20.9	4.7	3.0	chr9	100427328	100427391	(37967326)	+	(GCC)n	Simple_repeat	1	67	(0)	4130121
21	19.2	1.8	1.8	chr9	100427427	100427481	(37967236)	+	G-rich	Low_complexity	1	56	(0)	4130122
182	20.0	2.0	2.0	chr9	100427744	100427794	(37966923)	C	MIRb	SINE/MIR	(30)	238	188	4130123
27	13.1	0.0	0.0	chr9	104926447	104926488	(33468229)	+	(A)n	Simple_repeat	1	42	(0)	4136496
15	21.3	8.3	0.0	chr9	104926641	104926700	(33468017)	+	(CCAGC)n	Simple_repeat	1	65	(0)	4136497
2309	8.6	2.6	0.0	chr9	104926930	104927231	(33467486)	+	AluSx	SINE/Alu	1	310	(2)	4136498
17	10.0	0.0	5.6	chr9	105694838	105694873	(32699844)	+	G-rich	Low_complexity	1	36	(0)	4137932
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
14	13.1	0.0	7.7	chr9	107489694	107489732	(30904985)	+	(GCC)n	Simple_repeat	1	39	(0)	4140834
14	24.7	0.0	8.2	chr9	107489948	107490020	(30904697)	+	G-rich	Low_complexity	1	73	(0)	4140835
23	3.7	0.0	0.0	chr9	107751143	107751170	(30643547)	+	(TG)n	Simple_repeat	1	28	(0)	4141503
428	31.3	5.2	5.3	chr9	107751383	107751615	(30643102)	C	MIRb	SINE/MIR	(5)	257	33	4141504
9324	7.6	13.6	1.4	chr9	107817612	107818993	(30575724)	+	LTR12C	LTR/ERV1	3	1579	(0)	4141659
16	9.3	0.0	0.0	chr9	108934333	108934355	(29460362)	+	(G)n	Simple_repeat	1	23	(0)	4143526
899	25.3	2.6	0.0	chr9	109120381	109120605	(29274112)	C	MIR	SINE/MIR	(26)	236	6	4143828
16	25.9	2.9	2.9	chr9	111483551	111483618	(26911099)	+	G-rich	Low_complexity	1	70	(0)	4147932
11	17.3	7.7	0.0	chr9	112073096	112073134	(26321583)	+	G-rich	Low_complexity	1	42	(0)	4149115
25	26.3	4.0	1.9	chr9	112073451	112073550	(26321167)	+	(CTCT)n	Simple_repeat	1	104	(0)	4149116
1844	12.4	0.7	5.4	chr9	112073614	112073911	(26320806)	+	AluSz6	SINE/Alu	10	293	(19)	4149117
16	0.0	3.2	6.2	chr9	112380050	112380080	(26014637)	+	(CGGGG)n	Simple_repeat	1	32	(0)	4149713
14	16.2	0.0	0.0	chr9	112380119	112380146	(26014571)	+	(CGC)n	Simple_repeat	1	28	(0)	4149714
2226	6.6	1.3	6.3	chr9	113376347	113376664	(25018053)	C	AluSg	SINE/Alu	(7)	303	2	4151545
2086	13.8	0.0	2.3	chr9	114493068	114493371	(23901346)	+	AluJo	SINE/Alu	1	297	(15)	4153775
851	12.0	0.8	0.8	chr9	114610940	114611064	(23783653)	+	AluJr	SINE/Alu	1	125	(187)	4154051
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
26	0.0	0.0	0.0	chr9	114611534	114611558	(23783159)	+	(GGC)n	Simple_repeat	1	25	(0)	4154053
19	0.0	0.0	0.0	chr9	116153458	116153478	(22241239)	+	(AG)n	Simple_repeat	1	21	(0)	4156813
16	14.2	0.0	0.0	chr9	116153857	116153887	(22240830)	+	(AAATA)n	Simple_repeat	1	31	(0)	4156814
36	15.6	6.2	2.0	chr9	116154272	116154367	(22240350)	+	(GCC)n	Simple_repeat	1	102	(0)	4156815
78	24.2	1.9	1.4	chr9	116446097	116446309	(21948408)	+	GA-rich	Low_complexity	1	217	(0)	4157408
268	30.2	6.3	4.0	chr9	116446446	116446569	(21948148)	C	MIR3	SINE/MIR	(62)	146	20	4157409
277	27.0	18.7	0.0	chr9	120902169	120902268	(17492449)	+	MER5B	DNA/hAT-Charlie	20	142	(36)	4165955
17	15.1	1.7	0.0	chr9	120902496	120902529	(17492188)	+	G-rich	Low_complexity	1	34	(0)	4165956
382	34.0	14.5	1.1	chr9	120902655	120902916	(17491801)	+	L2b	LINE/L2	3070	3372	(3)	4165957
14	7.2	6.9	0.0	chr9	121201053	121201081	(17193636)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	4166477
232	25.2	2.6	1.5	chr9	122377273	122377365	(16017352)	+	MIRc	SINE/MIR	81	174	(94)	4168932
12	19.7	0.0	0.0	chr9	122377466	122377494	(16017223)	+	(CCGCC)n	Simple_repeat	1	29	(0)	4168933
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
15	27.5	2.5	4.8	chr9	123267620	123267700	(15127017)	+	(CCCT)n	Simple_repeat	1	83	(0)	4170357
434	30.5	4.1	0.6	chr9	123304965	123305129	(15089588)	C	MIR	SINE/MIR	(3)	259	89	4170454
23	7.0	8.7	0.0	chr9	123305525	123305580	(15089137)	+	(CCTTTC)n	Simple_repeat	1	60	(0)	4170455
606	13.5	0.0	0.0	chr9	123305581	123305669	(15089048)	C	AluSx	SINE/Alu	(6)	306	218	4170456
1611	11.1	0.0	0.0	chr9	123305772	123305988	(15088729)	C	AluSx	SINE/Alu	(94)	218	2	4170456
12	23.1	3.2	6.2	chr9	123356083	123356145	(15038572)	+	GA-rich	Low_complexity	1	65	(0)	4170589
1795	17.6	0.7	1.0	chr9	123359406	123359748	(15034969)	C	AluJr	SINE/Alu	(0)	312	2	4170594
332	35.9	3.4	0.0	chr9	123360541	123360682	(15034035)	C	MER5A	DNA/hAT-Charlie	(0)	189	43	4170595
361	24.5	1.1	9.6	chr9	123960490	123960586	(14434131)	C	L2c	LINE/L2	(0)	3387	3300	4171598
463	27.1	15.3	2.8	chr9	123960587	123960768	(14433949)	+	MIRb	SINE/MIR	1	209	(59)	4171599
183	15.0	2.4	0.0	chr9	123960831	123960870	(14433847)	+	L2c	LINE/L2	3347	3387	(0)	4171600
472	34.0	2.1	7.5	chr9	124288588	124288841	(14105876)	C	MIR	SINE/MIR	(7)	255	16	4172329
944	21.2	0.6	0.0	chr9	124288980	124289144	(14105573)	C	AluJr	SINE/Alu	(10)	302	137	4172330
60	0.0	0.0	0.0	chr9	124289188	124289238	(14105479)	+	(CA)n	Simple_repeat	1	51	(0)	4172331
337	27.4	4.2	3.4	chr9	124289348	124289464	(14105253)	+	MIRb	SINE/MIR	116	233	(35)	4172332
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
321	23.9	8.1	4.2	chr9	124940681	124940859	(13453858)	C	MIR3	SINE/MIR	(57)	173	7	4173562
304	26.6	4.9	12.5	chr9	125199032	125199138	(13195579)	C	MIRb	SINE/MIR	(3)	265	168	4174121
2306	8.1	0.0	2.9	chr9	125199139	125199446	(13195271)	C	AluSg	SINE/Alu	(11)	299	1	4174122
304	26.6	4.9	12.5	chr9	125199447	125199514	(13195203)	C	MIRb	SINE/MIR	(101)	167	104	4174121
411	23.4	0.0	1.3	chr9	125236002	125236078	(13158639)	+	AluJr	SINE/Alu	137	212	(100)	4174230
16	0.0	0.0	0.0	chr9	125236083	125236099	(13158618)	+	(A)n	Simple_repeat	1	17	(0)	4174231
15	13.7	0.0	0.0	chr9	126652600	126652623	(11742094)	+	(TG)n	Simple_repeat	1	24	(0)	4176768
502	27.8	11.5	1.7	chr9	126694158	126694391	(11700326)	C	MIRb	SINE/MIR	(8)	260	1	4176849
379	30.5	6.3	2.8	chr9	126940908	126941089	(11453628)	C	L1ME4a	LINE/L1	(9)	6115	5927	4177360
229	20.8	0.0	8.6	chr9	126941090	126941147	(11453570)	+	L2a	LINE/L2	3124	3176	(250)	4177361
1915	12.4	2.0	1.0	chr9	126941165	126941464	(11453253)	+	L1MA2	LINE/L1	6002	6304	(0)	4177362
927	12.5	0.0	2.2	chr9	127585216	127585351	(10809366)	C	FLAM_C	SINE/Alu	(10)	133	1	4178551
538	27.8	12.4	0.0	chr9	127585364	127585554	(10809163)	C	MIRb	SINE/MIR	(16)	252	35	4178552
1926	15.9	0.3	1.6	chr9	127585608	127585915	(10808802)	C	AluJr4	SINE/Alu	(8)	304	1	4178553
5238	14.0	6.0	1.5	chr9	127700414	127701293	(10693424)	+	MER49	LTR/ERV1	1	922	(1)	4178826
31	27.1	1.4	5.6	chr9	127785379	127785520	(10609197)	+	(GGC)n	Simple_repeat	1	144	(0)	4179013
26	9.9	0.0	0.0	chr9	127785879	127785921	(10608796)	+	(GGC)n	Simple_repeat	1	43	(0)	4179014
39	29.1	1.2	4.1	chr9	127785978	127786147	(10608570)	+	(GGC)n	Simple_repeat	1	172	(0)	4179014
185	26.4	10.3	3.3	chr9	127862141	127862230	(10532487)	+	MIRc	SINE/MIR	27	123	(145)	4179193
108	31.8	1.3	1.0	chr9	127865862	127866252	(10528465)	+	(TG)n	Simple_repeat	1	396	(0)	4179205
190	25.5	0.0	5.6	chr9	127878496	127878549	(10516168)	+	L2c	LINE/L2	3304	3354	(21)	4179224
275	25.7	18.6	0.0	chr9	127878701	127878805	(10515912)	+	MIR3	SINE/MIR	9	137	(71)	4179229
667	14.6	0.8	8.8	chr9	127878930	127879066	(10515651)	+	FLAM_C	SINE/Alu	1	126	(17)	4179230
417	22.9	11.3	0.8	chr9	127904085	127904203	(10490514)	C	MIR	SINE/MIR	(20)	242	110	4179297
285	37.8	7.5	0.0	chr9	127904498	127904669	(10490048)	C	MIR3	SINE/MIR	(4)	204	19	4179298
292	29.9	8.7	5.8	chr9	128127246	128127401	(10267316)	C	MIRc	SINE/MIR	(82)	186	26	4179816
7998	7.1	0.6	1.8	chr9	128181336	128182354	(10212363)	+	LTR13	LTR/ERVK	1	1007	(0)	4179912
329	30.0	9.6	0.0	chr9	128370865	128371014	(10023703)	C	L2b	LINE/L2	(994)	2425	2260	4180346
27	6.0	0.0	0.0	chr9	128371210	128371244	(10023473)	+	(CCCTC)n	Simple_repeat	1	35	(0)	4180370
433	27.2	4.5	1.9	chr9	128404336	128404498	(9990219)	C	MIRb	SINE/MIR	(90)	178	19	4180442
15	8.9	0.0	0.0	chr9	128689232	128689255	(9705462)	+	(AGG)n	Simple_repeat	1	24	(0)	4181103
17	9.7	2.9	2.8	chr9	128689312	128689346	(9705371)	+	(GCC)n	Simple_repeat	1	36	(0)	4181104
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
16	17.8	4.3	2.0	chr9	128689519	128689524	(9705193)	+	(CCCTCC)n	Simple_repeat	1	13	(36)	4181107
13	12.5	0.0	3.5	chr9	128689525	128689553	(9705164)	+	(CCCTT)n	Simple_repeat	1	29	(0)	4181108
16	17.8	4.3	2.0	chr9	128689554	128689565	(9705152)	+	(CCCTCC)n	Simple_repeat	14	49	(0)	4181107
14	34.7	0.0	0.0	chr9	128689908	128689958	(9704759)	+	(CCCC)n	Simple_repeat	1	51	(0)	4181109
12	18.5	0.0	7.1	chr9	128703050	128703091	(9691626)	+	(CCCTG)n	Simple_repeat	1	42	(0)	4181128
12	24.4	0.0	0.0	chr9	128723470	128723503	(9671214)	+	(GGTG)n	Simple_repeat	1	34	(0)	4181165
2524	5.4	0.3	0.0	chr9	128760878	128761172	(9633545)	+	AluY	SINE/Alu	1	296	(15)	4181261
477	19.4	7.1	12.2	chr9	128761173	128761282	(9633435)	+	MIRb	SINE/MIR	159	260	(8)	4181260
2067	13.4	1.7	0.0	chr9	128761294	128761585	(9633132)	C	AluSx1	SINE/Alu	(15)	297	1	4181262
2328	8.0	0.0	0.0	chr9	128772487	128772772	(9621945)	+	AluSx	SINE/Alu	1	286	(26)	4181288
1222	11.7	0.0	0.6	chr9	128786493	128786672	(9608045)	C	AluSx	SINE/Alu	(133)	179	1	4181322
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
3192	12.2	6.4	0.4	chr9	128819553	128820048	(9574669)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	4181406
14	22.1	2.4	0.0	chr9	129174640	129174681	(9220036)	+	(GGCGAG)n	Simple_repeat	1	43	(0)	4182239
14	11.6	0.0	3.3	chr9	129174722	129174751	(9219966)	+	(CTTT)n	Simple_repeat	1	30	(0)	4182240
24	11.0	4.5	5.8	chr9	129174945	129175010	(9219707)	+	G-rich	Low_complexity	1	69	(0)	4182241
16	22.6	0.0	0.0	chr9	129175064	129175096	(9219621)	+	A-rich	Low_complexity	1	33	(0)	4182242
260	28.5	15.4	2.0	chr9	129203395	129203641	(9191076)	C	L2a	LINE/L2	(169)	3206	2921	4182302
290	37.5	10.0	0.9	chr9	129246744	129246969	(9147748)	+	L3	LINE/CR1	3224	3472	(627)	4182413
796	15.2	0.0	0.0	chr9	129247093	129247210	(9147507)	C	AluJo	SINE/Alu	(194)	118	1	4182414
359	31.7	2.4	0.0	chr9	129323308	129323430	(9071287)	+	L2b	LINE/L2	3241	3366	(9)	4182568
250	24.5	13.8	2.1	chr9	129323433	129323528	(9071189)	C	MIR3	SINE/MIR	(65)	143	35	4182569
400	23.0	9.2	2.7	chr9	129323904	129324078	(9070639)	+	MIRc	SINE/MIR	1	185	(45)	4182570
15	0.0	0.0	8.3	chr9	129414568	129414591	(8980126)	+	(GT)n	Simple_repeat	1	24	(0)	4182763
23	10.2	0.0	4.3	chr9	129482661	129482735	(8911982)	+	(GGAGGGG)n	Simple_repeat	1	71	(0)	4182935
189	21.3	7.8	0.0	chr9	129489672	129489718	(8904999)	+	MIRc	SINE/MIR	21	71	(197)	4182957
244	25.7	9.3	2.4	chr9	129490155	129490307	(8904410)	+	L2b	LINE/L2	2941	3118	(257)	4182958
40	13.0	1.0	6.2	chr9	129610183	129610278	(8784439)	+	G-rich	Low_complexity	1	97	(0)	4183244
16	16.6	4.2	8.0	chr9	129610534	129610605	(8784112)	+	(CGGAGG)n	Simple_repeat	1	75	(0)	4183245
293	31.8	9.3	4.9	chr9	130701629	130701853	(7692864)	C	MamSINE1	SINE/tRNA-RTE	(29)	261	26	4185615
14	14.9	5.4	0.0	chr9	131393728	131393764	(7000953)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	4187011
13	18.8	4.5	2.2	chr9	131393757	131393800	(7000917)	+	(CCTGGCT)n	Simple_repeat	1	46	(0)	4187012
33	16.2	14.3	1.1	chr9	131394000	131394160	(7000557)	+	(GCGA)n	Simple_repeat	1	184	(0)	4187013
16	18.4	3.3	9.7	chr9	131394159	131394248	(7000469)	+	(GCCCC)n	Simple_repeat	1	93	(0)	4187014
194	37.5	3.7	0.9	chr9	131478810	131478914	(6915803)	C	MIRb	SINE/MIR	(103)	165	58	4187171
15	20.4	1.5	7.6	chr9	131531183	131531247	(6863470)	+	(CCGCGC)n	Simple_repeat	1	66	(0)	4187226
5215	7.4	5.1	2.9	chr9	132668868	132669498	(5725219)	C	MER4E1	LTR/ERV1	(131)	650	1	4189286
12	18.1	0.0	3.0	chr9	132669623	132669655	(5725062)	+	(CCACT)n	Simple_repeat	1	33	(0)	4189288
182	36.7	13.2	0.6	chr9	132983849	132984007	(5410710)	+	MIR	SINE/MIR	17	198	(64)	4189857
13	13.0	0.0	3.6	chr9	132984336	132984363	(5410354)	+	GA-rich	Low_complexity	1	28	(0)	4189858
194	31.6	1.2	1.2	chr9	132984414	132984493	(5410224)	C	MIR3	SINE/MIR	(3)	205	126	4189859
15	7.3	3.2	3.1	chr9	133120413	133120443	(5274274)	+	(CCACCC)n	Simple_repeat	1	32	(0)	4190087
297	28.9	0.1	0.1	chr9	133123678	133124400	(5270317)	+	(AC)n	Simple_repeat	1	723	(0)	4190091
313	31.6	7.2	7.0	chr9	133147097	133147426	(5247291)	+	L2b	LINE/L2	2949	3279	(96)	4190135
763	29.1	3.6	0.5	chr9	133345845	133346058	(5048659)	+	MIR	SINE/MIR	36	256	(6)	4190447
258	32.4	16.9	2.1	chr9	133346245	133346430	(5048287)	C	MIRb	SINE/MIR	(31)	237	19	4190448
19	18.4	3.4	3.3	chr9	133992811	133992869	(4401848)	+	G-rich	Low_complexity	1	61	(0)	4191372
11	21.6	0.0	4.9	chr9	133992904	133992944	(4401773)	+	(CCGCCC)n	Simple_repeat	1	41	(0)	4191373
17	19.5	3.5	3.4	chr9	134068534	134068590	(4326127)	+	(GGCG)n	Simple_repeat	1	59	(0)	4191478
186	28.4	10.0	0.0	chr9	134068751	134068831	(4325886)	+	MIR3	SINE/MIR	103	192	(16)	4191479
2280	7.9	0.0	4.9	chr9	134068967	134069295	(4325422)	C	AluSq2	SINE/Alu	(0)	313	1	4191480
295	29.6	2.8	0.4	chr9	134368506	134369539	(4025178)	+	(TG)n	Simple_repeat	1	1063	(0)	4191942
4589	11.2	2.2	5.1	chr9	135468602	135469313	(2925404)	+	LTR8	LTR/ERV1	1	691	(0)	4193280
1579	12.2	0.0	0.5	chr9	135957770	135957991	(2436726)	C	AluSz6	SINE/Alu	(7)	305	85	4193842
29	0.0	0.0	0.0	chr9	135967784	135967808	(2426909)	+	(GT)n	Simple_repeat	1	25	(0)	4193861
76	36.3	0.9	2.1	chr9	135967825	135968156	(2426561)	+	(TG)n	Simple_repeat	1	335	(0)	4193862
200	36.0	2.6	5.9	chr9	135968262	135968379	(2426338)	C	L2a	LINE/L2	(200)	3187	3074	4193859
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
13	12.3	3.8	9.1	chr9	136118938	136118990	(2275727)	+	(GCCTGC)n	Simple_repeat	1	55	(0)	4194048
56	24.9	3.1	6.4	chr9	136133052	136133340	(2261377)	+	(CCGCC)n	Simple_repeat	1	298	(0)	4194068
214	22.1	17.4	1.0	chr9	136663250	136663345	(1731372)	C	MIRb	SINE/MIR	(115)	153	39	4194625
24	28.0	1.3	0.0	chr9	136687441	136687517	(1707200)	+	G-rich	Low_complexity	1	78	(0)	4194651
31	27.9	2.0	4.6	chr9	136687516	136687665	(1707052)	+	(CGCCC)n	Simple_repeat	1	153	(0)	4194652
924	15.8	3.2	5.6	chr9	136694098	136694292	(1700425)	+	MER53	DNA/hAT	2	191	(2)	4194662
17	8.0	0.0	0.0	chr9	136694393	136694419	(1700298)	+	(GGGGT)n	Simple_repeat	1	27	(0)	4194663
12	20.2	2.9	0.0	chr9	136944255	136944288	(1450429)	+	G-rich	Low_complexity	1	35	(0)	4195030
13	23.9	5.4	3.9	chr9	136945454	136945527	(1449190)	+	(AGAAGGT)n	Simple_repeat	1	78	(0)	4195032
293	12.4	1.4	0.0	chr9	136949908	136949983	(1444734)	C	AluJb	SINE/Alu	(52)	81	1	4195039
389	32.5	14.1	4.7	chr9	137074690	137074911	(1319806)	C	L2b	LINE/L2	(94)	3281	3020	4195196
3968	10.7	2.0	0.0	chr9	137075103	137075645	(1319072)	+	MER41A	LTR/ERV1	1	554	(0)	4195198
194	32.1	11.7	3.1	chr9	137127214	137127470	(1267247)	+	L2a	LINE/L2	2313	2594	(825)	4195267
3182	10.4	4.2	7.7	chr9	137127600	137128119	(1266598)	C	LTR2C	LTR/ERV1	(0)	501	1	4195268
14	7.3	6.9	0.0	chr9	137234077	137234105	(1160612)	+	(CTGCCC)n	Simple_repeat	1	31	(0)	4195371
15	33.2	0.0	0.0	chr9	137316047	137316095	(1078622)	+	(CC)n	Simple_repeat	1	49	(0)	4195486
2733	28.8	6.1	3.1	chr9	137490395	137491094	(903623)	+	L1MDa	LINE/L1	1741	2433	(4200)	4195689
1072	17.1	0.0	0.6	chr9	137491113	137491287	(903430)	+	FAM	SINE/Alu	1	174	(11)	4195691
455	21.2	9.4	0.7	chr9	137491322	137491495	(903222)	+	L1MDa	LINE/L1	2481	2670	(3867)	4195689
44	2.3	0.0	0.0	chrX	317688	317732	(155723163)	+	(CCCAC)n	Simple_repeat	1	45	(0)	4358397
12	15.3	3.5	0.0	chrX	317745	317773	(155723122)	+	(CCCCA)n	Simple_repeat	1	30	(0)	4358398
103	40.8	2.5	3.7	chrX	1392922	1393431	(154647464)	+	(TCTT)n	Simple_repeat	1	503	(0)	4360888
1904	16.0	13.6	2.7	chrX	2609730	2610141	(153430754)	C	MER4C	LTR/ERV1	(1)	464	1	4363230
275	11.8	7.8	0.5	chrX	2610249	2610822	(153430073)	+	(TC)n	Simple_repeat	1	619	(0)	4363231
14	26.0	0.0	8.0	chrX	3713490	3713564	(152327331)	+	G-rich	Low_complexity	1	75	(0)	4365421
1023	15.1	0.0	0.0	chrX	9344005	9344150	(146696745)	+	AluJb	SINE/Alu	167	312	(0)	4374602
2276	11.6	0.0	0.0	chrX	9344403	9344704	(146696191)	C	AluSx1	SINE/Alu	(10)	302	1	4374603
3343	5.9	1.7	8.4	chrX	11123179	11123678	(144917217)	+	L1PA7	LINE/L1	5687	6152	(2)	4377523
2369	8.8	0.0	0.3	chrX	11123729	11124023	(144916872)	C	AluSg	SINE/Alu	(16)	294	1	4377524
16	19.2	0.0	0.0	chrX	13291164	13291193	(142749702)	+	(C)n	Simple_repeat	1	30	(0)	4380951
997	16.1	3.5	5.0	chrX	14872439	14872640	(141168255)	C	MER20	DNA/hAT-Charlie	(5)	214	16	4383369
231	32.8	5.4	7.2	chrX	15404836	15405042	(140635853)	+	MamSINE1	SINE/tRNA-RTE	23	225	(65)	4384317
27	0.0	0.0	0.0	chrX	17737423	17737448	(138303447)	+	(C)n	Simple_repeat	1	26	(0)	4388319
15	22.9	2.7	6.5	chrX	20266637	20266711	(135774184)	+	(CCCG)n	Simple_repeat	1	77	(0)	4392859
42	10.2	0.0	0.0	chrX	20266727	20266791	(135774104)	+	(GCGGCA)n	Simple_repeat	1	65	(0)	4392860
2103	13.7	0.0	0.7	chrX	23694295	23694601	(132346294)	+	AluJb	SINE/Alu	1	305	(7)	4397828
201	33.1	6.8	4.6	chrX	23694602	23694643	(132346252)	C	MamSINE1	SINE/tRNA-RTE	(225)	65	23	4397827
454	21.1	5.8	1.3	chrX	23695012	23695160	(132345735)	C	MER112	DNA/hAT-Charlie	(9)	252	97	4397829
19	17.6	2.2	0.0	chrX	24025694	24025738	(132015157)	+	G-rich	Low_complexity	1	46	(0)	4398623
12	14.3	4.8	4.5	chrX	24025746	24025787	(132015108)	+	(GTCCCGC)n	Simple_repeat	1	44	(0)	4398624
11	20.6	5.1	0.0	chrX	24150109	24150147	(131890748)	+	(AGGCCGA)n	Simple_repeat	1	41	(0)	4398943
23	20.0	4.2	2.7	chrX	24150334	24150405	(131890490)	+	(GGC)n	Simple_repeat	1	75	(0)	4398944
15	12.6	0.0	0.0	chrX	30196337	30196363	(125844532)	+	(TGTA)n	Simple_repeat	1	27	(0)	4407853
277	32.9	0.0	0.0	chrX	38327895	38327964	(117712931)	+	L2a	LINE/L2	3357	3426	(0)	4418769
15	25.4	0.0	2.0	chrX	38806160	38806208	(117234687)	+	(CACCCC)n	Simple_repeat	1	49	(0)	4419536
15	6.6	0.0	10.3	chrX	39689180	39689218	(116351677)	+	(TCCCC)n	Simple_repeat	1	39	(0)	4420984
388	30.9	0.0	0.9	chrX	39851049	39851156	(116189739)	+	L2c	LINE/L2	3278	3384	(3)	4421313
2071	22.2	13.8	0.8	chrX	39851185	39851696	(116189199)	C	MLT1G	LTR/ERVL-MaLR	(2)	589	1	4421314
48	0.0	0.0	0.0	chrX	40014386	40014426	(116026469)	+	(GT)n	Simple_repeat	1	41	(0)	4421630
16	5.2	0.0	0.0	chrX	40014427	40014446	(116026449)	+	(CG)n	Simple_repeat	1	20	(0)	4421631
31	0.0	0.0	0.0	chrX	40014840	40014866	(116026029)	+	(CA)n	Simple_repeat	1	27	(0)	4421632
29	3.2	0.0	0.0	chrX	40014919	40014950	(116025945)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	4421633
12	18.1	0.0	3.0	chrX	40096626	40096658	(115944237)	+	(GCACAC)n	Simple_repeat	1	33	(0)	4421758
14	12.7	0.0	0.0	chrX	40097155	40097180	(115943715)	+	(GCCC)n	Simple_repeat	1	26	(0)	4421759
17	15.7	0.0	6.2	chrX	40097513	40097560	(115943335)	+	G-rich	Low_complexity	1	48	(0)	4421760
13	19.7	6.2	2.0	chrX	40105099	40105146	(115935749)	+	(GCG)n	Simple_repeat	1	51	(0)	4421770
17	4.0	3.9	0.0	chrX	40105325	40105350	(115935545)	+	(CGC)n	Simple_repeat	1	27	(0)	4421771
809	24.4	7.1	2.2	chrX	40111468	40111735	(115929160)	+	L1ME4b	LINE/L1	450	731	(161)	4421777
311	34.6	5.2	0.0	chrX	40111776	40111957	(115928938)	C	L1ME4b	LINE/L1	(188)	704	513	4421778
308	29.5	18.5	6.1	chrX	40111973	40112351	(115928544)	+	L2a	LINE/L2	1961	2397	(1022)	4421779
329	28.9	8.8	3.6	chrX	40117668	40117807	(115923088)	+	MIRb	SINE/MIR	2	149	(119)	4421792
25	28.4	2.6	0.0	chrX	40117950	40118027	(115922868)	+	(CT)n	Simple_repeat	1	80	(0)	4421793
11	25.1	1.8	5.2	chrX	40153892	40153948	(115886947)	+	G-rich	Low_complexity	1	58	(0)	4421858
12	16.9	4.5	4.3	chrX	40154706	40154749	(115886146)	+	(GCAGG)n	Simple_repeat	1	46	(0)	4421861
19	29.7	3.8	1.2	chrX	40154959	40155038	(115885857)	+	(CG)n	Simple_repeat	1	83	(0)	4421862
16	25.9	0.0	2.2	chrX	40155037	40155092	(115885803)	+	G-rich	Low_complexity	1	54	(0)	4421863
180	11.1	5.3	7.7	chrX	40171690	40171728	(115869167)	C	L2	LINE/L2	(2099)	1320	1283	4421887
2311	7.7	0.0	7.4	chrX	40265878	40266064	(115774831)	+	AluSz	SINE/Alu	137	300	(12)	4422113
15	12.0	0.0	0.0	chrX	40735345	40735371	(115305524)	+	(CCG)n	Simple_repeat	1	27	(0)	4422996
13	26.0	1.9	1.9	chrX	40735602	40735653	(115305242)	+	G-rich	Low_complexity	1	53	(0)	4422997
5796	14.5	5.5	1.7	chrX	41081531	41083538	(114957357)	C	L1MB4	LINE/L1	(0)	6180	4083	4423641
1317	11.3	20.7	0.4	chrX	41330453	41330683	(114710212)	C	AluSz	SINE/Alu	(22)	290	1	4424159
272	31.7	13.9	2.1	chrX	41330687	41330876	(114710019)	C	MIRc	SINE/MIR	(43)	225	10	4424160
1125	7.0	0.0	0.7	chrX	41331057	41331199	(114709696)	C	AluSc5	SINE/Alu	(167)	142	1	4424161
17	12.3	0.0	5.1	chrX	41335055	41335093	(114705802)	+	G-rich	Low_complexity	1	39	(0)	4424167
12	7.7	0.0	9.1	chrX	44872809	44872841	(111168054)	+	(CCTCC)n	Simple_repeat	1	33	(0)	4429938
29	20.5	1.5	0.0	chrX	44873335	44873401	(111167494)	+	(GCC)n	Simple_repeat	1	68	(0)	4429939
16359	6.1	1.2	3.6	chrX	45004017	45006327	(111034568)	C	HERVIP10F-int	LTR/ERV1	(5481)	2256	1	4430166
3134	8.3	10.0	0.4	chrX	45006328	45006789	(111034106)	C	LTR10F	LTR/ERV1	(0)	511	1	4430166
16	15.9	0.0	0.0	chrX	47144439	47144466	(108896429)	+	(C)n	Simple_repeat	1	28	(0)	4433479
1347	27.6	7.3	3.7	chrX	47222211	47222806	(108818089)	C	L2a	LINE/L2	(0)	3426	2812	4433623
13	11.8	2.3	8.9	chrX	47483437	47483480	(108557415)	+	(TTTG)n	Simple_repeat	1	45	(0)	4434262
13	25.3	1.8	3.6	chrX	47483481	47483489	(108557406)	+	(GTTTT)n	Simple_repeat	3	56	(0)	4434263
2200	8.9	0.0	0.4	chrX	47562236	47562515	(108478380)	+	AluSq2	SINE/Alu	35	313	(0)	4434448
586	31.2	0.0	3.4	chrX	47579904	47580082	(108460813)	+	MIR	SINE/MIR	90	262	(0)	4434466
4396	9.2	2.6	0.2	chrX	47675916	47676479	(108364416)	+	LTR19B	LTR/ERV1	1	578	(2)	4434640
2469	11.1	1.6	2.2	chrX	47676491	47676859	(108364036)	+	THE1D	LTR/ERVL-MaLR	15	381	(0)	4434641
11	16.4	5.9	0.0	chrX	48521915	48521948	(107518947)	+	(CCCTGCT)n	Simple_repeat	1	36	(0)	4436239
186	31.7	6.8	3.4	chrX	48782746	48782917	(107257978)	C	L2c	LINE/L2	(85)	3290	3110	4436833
180	20.4	2.0	2.0	chrX	48789528	48789577	(107251318)	C	MIR1_Amn	SINE/MIR	(71)	159	110	4436849
20	14.4	7.7	2.9	chrX	48794813	48794877	(107246018)	+	(GTGCAT)n	Simple_repeat	1	70	(0)	4436853
184	29.9	11.8	0.0	chrX	48795353	48795449	(107245446)	C	MIR	SINE/MIR	(139)	123	14	4436854
322	38.8	2.1	0.5	chrX	48795467	48795655	(107245240)	C	MIRb	SINE/MIR	(12)	256	65	4436855
424	19.3	1.2	0.0	chrX	48800982	48801064	(107239831)	C	MIR	SINE/MIR	(101)	161	78	4436864
297	23.4	0.4	2.3	chrX	48801051	48801135	(107239760)	+	MIR	SINE/MIR	104	182	(86)	4436865
18	15.3	0.0	2.6	chrX	49043454	49043492	(106997403)	+	(CCT)n	Simple_repeat	1	39	(0)	4437372
1557	5.2	0.0	2.0	chrX	49155656	49155850	(106885045)	+	L1PA5	LINE/L1	5964	6154	(0)	4437627
2549	17.4	8.6	1.9	chrX	49841102	49841540	(106199355)	C	MER68B	LTR/ERVL	(4)	560	100	4438455
336	18.3	4.3	0.0	chrX	50204259	50204349	(105836546)	C	MER5A	DNA/hAT-Charlie	(0)	189	67	4439055
17	0.0	0.0	0.0	chrX	50204659	50204677	(105836218)	+	(A)n	Simple_repeat	1	19	(0)	4439056
262	33.9	4.2	0.9	chrX	53317467	53317582	(102723313)	+	MIRb	SINE/MIR	73	192	(76)	4443469
11	24.1	7.4	0.0	chrX	53683498	53683551	(102357344)	+	(CCCCACT)n	Simple_repeat	1	58	(0)	4444213
18	4.7	0.0	0.0	chrX	54530146	54530167	(101510728)	+	(C)n	Simple_repeat	1	22	(0)	4446015
17	19.2	0.0	0.0	chrX	64205654	64205689	(91835206)	+	(CGC)n	Simple_repeat	1	36	(0)	4451082
11	29.7	1.6	3.2	chrX	69285842	69285902	(86754993)	+	A-rich	Low_complexity	1	62	(0)	4457939
411	27.1	19.3	0.5	chrX	71098166	71098358	(84942537)	C	MIRc	SINE/MIR	(7)	261	24	4460818
31	13.7	6.0	0.0	chrX	71146104	71146153	(84894742)	+	(CT)n	Simple_repeat	1	52	(0)	4460882
75	1.5	0.0	0.0	chrX	71146154	71146221	(84894674)	+	(CA)n	Simple_repeat	1	68	(0)	4460883
31	13.7	6.0	0.0	chrX	71146222	71146237	(84894658)	+	(CT)n	Simple_repeat	1	18	(0)	4460884
31	34.6	1.6	0.0	chrX	71146349	71146475	(84894420)	+	(TG)n	Simple_repeat	1	129	(0)	4460885
20	32.8	2.0	4.6	chrX	71146476	71146496	(84894399)	+	(TGTGTC)n	Simple_repeat	1	151	(0)	4460886
1844	10.8	2.1	9.8	chrX	71180747	71181053	(84859842)	+	AluSx	SINE/Alu	1	283	(29)	4460943
52	0.0	0.0	0.0	chrX	71181054	71181100	(84859795)	+	(AAAT)n	Simple_repeat	1	47	(0)	4460944
2334	9.9	0.0	0.7	chrX	71181117	71181418	(84859477)	+	AluSq2	SINE/Alu	1	300	(13)	4460945
596	7.7	0.0	0.0	chrX	71181542	71181619	(84859276)	+	MADE1	DNA/TcMar-Mariner	3	80	(0)	4460946
85	3.6	0.0	0.0	chrX	71255085	71255170	(84785725)	+	(TC)n	Simple_repeat	1	86	(0)	4461123
36	22.6	2.2	1.1	chrX	71255181	71255270	(84785625)	+	(CT)n	Simple_repeat	1	92	(0)	4461124
22	9.4	6.5	0.0	chrX	71366187	71366232	(84674663)	+	(CCCCTCT)n	Simple_repeat	1	49	(0)	4461413
52	22.0	0.8	0.0	chrX	73563335	73563363	(82477532)	+	GA-rich	Low_complexity	1	29	(0)	4464581
29	3.2	0.0	0.0	chrX	73563364	73563395	(82477500)	+	(CGT)n	Simple_repeat	1	32	(0)	4464582
52	22.0	0.8	0.0	chrX	73563396	73563487	(82477408)	+	GA-rich	Low_complexity	30	122	(0)	4464583
2489	24.6	7.7	4.7	chrX	73969908	73970539	(82070356)	C	L1MD3	LINE/L1	(1248)	5693	5057	4465017
2281	9.7	0.3	3.1	chrX	73970540	73970858	(82070037)	C	AluSx3	SINE/Alu	(1)	310	1	4465023
2489	24.6	7.7	4.7	chrX	73970859	73971301	(82069594)	C	L1MD3	LINE/L1	(1885)	5056	4576	4465017
19	13.2	0.0	2.9	chrX	74293414	74293448	(81747447)	+	GA-rich	Low_complexity	1	35	(0)	4465402
1127	4.3	0.0	0.0	chrX	76109426	76109592	(79931303)	C	L1PA6	LINE/L1	(0)	6154	6001	4467254
22	17.9	0.0	0.0	chrX	76109708	76109746	(79931149)	+	(T)n	Simple_repeat	1	39	(0)	4467255
16	16.5	0.0	0.0	chrX	76109769	76109796	(79931099)	+	(T)n	Simple_repeat	1	28	(0)	4467255
545	18.9	2.9	3.6	chrX	76109985	76110121	(79930774)	+	L1MA3	LINE/L1	14	149	(7416)	4467256
11417	15.7	3.8	0.9	chrX	76110098	76110153	(79930742)	+	L1MA3	LINE/L1	1103	1148	(6417)	4467256
22	19.4	0.0	0.0	chrX	77785766	77785806	(78255089)	+	(C)n	Simple_repeat	1	41	(0)	4468845
340	27.6	1.3	0.0	chrX	78200009	78200084	(77840811)	C	L2b	LINE/L2	(0)	3375	3299	4469610
248	27.6	9.4	4.6	chrX	79081683	79081863	(76959032)	+	MIR3	SINE/MIR	17	206	(2)	4470492
13	27.8	1.3	6.3	chrX	79082132	79082209	(76958686)	+	(CATT)n	Simple_repeat	1	79	(0)	4470493
107	11.7	3.7	0.5	chrX	80809684	80809870	(75231025)	+	GA-rich	Low_complexity	1	194	(0)	4472223
13	6.8	5.7	5.4	chrX	101408418	101408452	(54632443)	+	(CCCT)n	Simple_repeat	1	37	(0)	4495991
20	25.4	4.3	0.0	chrX	101931757	101931826	(54109069)	+	(GCC)n	Simple_repeat	1	73	(0)	4496657
12	15.8	9.5	0.0	chrX	101931826	101931867	(54109028)	+	(GGCA)n	Simple_repeat	1	46	(0)	4496658
29	3.2	0.0	0.0	chrX	101931878	101931909	(54108986)	+	(GCC)n	Simple_repeat	1	32	(0)	4496659
18	22.1	0.0	0.0	chrX	102516822	102516858	(53524037)	+	(C)n	Simple_repeat	1	37	(0)	4497355
590	17.7	1.0	0.5	chrX	103203274	103203401	(52837494)	+	L1M2	LINE/L1	5174	5299	(847)	4498272
919	17.3	0.0	0.0	chrX	103203402	103203534	(52837361)	+	AluSx3	SINE/Alu	167	299	(12)	4498273
1603	17.2	6.8	5.6	chrX	103203535	103203910	(52836985)	C	L1MB7	LINE/L1	(61)	6621	6241	4498274
6413	17.2	3.1	4.7	chrX	103203899	103204294	(52836601)	C	L1MB7	LINE/L1	(2295)	4349	3982	4498274
584	19.8	2.3	2.9	chrX	103685463	103685634	(52355261)	C	L1MC5	LINE/L1	(0)	9304	9134	4498989
1380	20.9	6.3	7.1	chrX	103685659	103686122	(52354773)	C	L1MC5	LINE/L1	(13)	9291	8832	4498990
21	13.9	0.0	0.0	chrX	103687084	103687116	(52353779)	+	(T)n	Simple_repeat	1	33	(0)	4498992
386	29.9	15.6	0.0	chrX	106802161	106802317	(49238578)	+	MIRb	SINE/MIR	74	259	(3)	4503206
329	30.8	11.8	0.5	chrX	108139210	108139405	(47901490)	+	MIRb	SINE/MIR	40	260	(8)	4505355
2347	14.3	0.6	0.8	chrX	108139706	108140071	(47900824)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	4505356
16	11.2	3.3	0.0	chrX	108439943	108439972	(47600923)	+	(CTT)n	Simple_repeat	1	31	(0)	4505824
340	30.6	11.3	0.6	chrX	110167733	110167890	(45873005)	C	L2c	LINE/L2	(26)	3361	3185	4508043
281	36.9	4.7	0.0	chrX	110168285	110168406	(45872489)	C	L2b	LINE/L2	(24)	3351	3224	4508044
396	23.6	14.4	3.6	chrX	110228328	110228494	(45812401)	C	MIR3	SINE/MIR	(1)	207	20	4508110
734	18.1	2.5	0.6	chrX	110665892	110666047	(45374848)	+	Zaphod3	DNA/hAT-Tip100	19	177	(2446)	4508691
13	24.8	3.7	1.8	chrX	118116823	118116876	(37924019)	+	GA-rich	Low_complexity	1	56	(0)	4518568
256	31.4	12.5	0.0	chrX	119015272	119015411	(37025484)	+	MIR3	SINE/MIR	46	205	(3)	4520317
642	30.0	9.2	8.0	chrX	119389858	119390321	(36650574)	+	L2	LINE/L2	378	847	(2572)	4520957
28	19.6	0.0	0.0	chrX	119605896	119605953	(36434942)	+	(GGC)n	Simple_repeat	1	58	(0)	4521405
13	18.2	0.0	0.0	chrX	120561247	120561277	(35479618)	+	(CGCTCC)n	Simple_repeat	1	31	(0)	4523168
11	30.8	1.5	4.4	chrX	120561438	120561504	(35479391)	+	G-rich	Low_complexity	1	68	(0)	4523169
18	25.3	1.6	9.4	chrX	120561550	120561674	(35479221)	+	GA-rich	Low_complexity	1	127	(0)	4523170
389	28.6	9.9	5.9	chrX	123859361	123859564	(32181331)	+	MIR	SINE/MIR	34	246	(16)	4527538
17	12.4	2.9	0.0	chrX	123859760	123859794	(32181101)	+	G-rich	Low_complexity	1	36	(0)	4527539
408	33.5	12.0	0.6	chrX	123861110	123861286	(32179609)	C	MIR3	SINE/MIR	(2)	206	7	4527540
15	39.9	0.0	1.3	chrX	123861694	123861768	(32179127)	+	(AT)n	Simple_repeat	1	75	(0)	4527541
38	11.2	4.9	2.3	chrX	123961642	123961723	(32079172)	+	(CCCT)n	Simple_repeat	1	86	(0)	4527820
15	29.8	0.0	0.0	chrX	129523567	129523608	(26517287)	+	(CC)n	Simple_repeat	1	42	(0)	4534805
20	23.4	1.3	5.1	chrX	129540592	129540668	(26500227)	+	G-rich	Low_complexity	1	78	(0)	4534851
18	5.1	1.9	11.3	chrX	129742363	129742414	(26298481)	+	(CCCT)n	Simple_repeat	1	53	(0)	4535215
20	24.5	1.6	1.5	chrX	129742415	129742425	(26298470)	+	(CCCCT)n	Simple_repeat	2	65	(0)	4535216
13	26.5	2.2	0.0	chrX	129952734	129952778	(26088117)	+	(TGTC)n	Simple_repeat	1	46	(0)	4535648
14	20.7	2.6	0.0	chrX	129952760	129952798	(26088097)	+	(CTCG)n	Simple_repeat	1	40	(0)	4535649
66	0.0	0.0	0.0	chrX	129952799	129952854	(26088041)	+	(CT)n	Simple_repeat	1	56	(0)	4535650
274	29.4	2.7	5.2	chrX	129956975	129957089	(26083806)	C	X7A_LINE	LINE/CR1	(117)	150	39	4535658
22	20.1	4.2	2.7	chrX	129982405	129982476	(26058419)	+	(CTCC)n	Simple_repeat	1	75	(0)	4535724
724	28.8	0.0	5.1	chrX	130061217	130061407	(25979488)	C	L2c	LINE/L2	(1)	3386	3206	4535870
217	32.4	10.8	0.0	chrX	130165123	130165230	(25875665)	C	MIRc	SINE/MIR	(95)	173	53	4536076
16	21.4	5.6	0.0	chrX	132216520	132216573	(23824322)	+	G-rich	Low_complexity	1	57	(0)	4539075
42	0.0	0.0	2.3	chrX	132218094	132218136	(23822759)	+	(CCCACC)n	Simple_repeat	1	43	(0)	4539076
17	31.5	1.3	1.3	chrX	135422100	135422175	(20618720)	+	(CGGCGG)n	Simple_repeat	1	77	(0)	4544315
15	6.7	6.1	2.9	chrX	135521657	135521689	(20519206)	+	GA-rich	Low_complexity	1	35	(0)	4544493
30	26.9	0.9	3.6	chrX	135521835	135521944	(20518951)	+	(CTC)n	Simple_repeat	1	111	(0)	4544494
14	13.1	0.0	0.0	chrX	136496720	136496745	(19544150)	+	(TCAT)n	Simple_repeat	1	26	(0)	4546082
198	28.0	0.0	0.0	chrX	136496766	136496815	(19544080)	C	L2c	LINE/L2	(39)	3348	3299	4546083
1837	11.3	3.8	3.8	chrX	136878471	136878763	(19162132)	+	AluSx	SINE/Alu	8	300	(12)	4546772
2358	6.2	1.0	0.7	chrX	136908670	136908959	(19131936)	C	AluSx4	SINE/Alu	(13)	297	7	4546850
989	19.8	5.5	6.5	chrX	136908960	136909065	(19131830)	C	MER33	DNA/hAT-Charlie	(177)	147	35	4546848
17	20.4	2.2	0.0	chrX	136909304	136909348	(19131547)	+	G-rich	Low_complexity	1	46	(0)	4546851
879	10.7	0.0	1.5	chrX	139852178	139852310	(16188585)	+	LTR10F	LTR/ERV1	381	511	(0)	4551259
1614	9.9	6.3	0.0	chrX	139852311	139852452	(16188443)	+	HERVIP10FH-int	LTR/ERV1	1	158	(4944)	4551259
31	0.0	0.0	0.0	chrX	139852453	139852481	(16188414)	+	(G)n	Simple_repeat	1	29	(0)	4551260
19755	7.3	1.3	1.5	chrX	139852482	139857325	(16183570)	+	HERVIP10FH-int	LTR/ERV1	157	7733	(4)	4551259
14	27.1	0.0	0.0	chrX	139933089	139933132	(16107763)	+	(CCCCG)n	Simple_repeat	1	44	(0)	4551411
17	17.2	0.0	5.9	chrX	141177117	141177167	(14863728)	+	G-rich	Low_complexity	1	51	(0)	4553425
12	18.9	8.0	1.9	chrX	141177228	141177277	(14863618)	+	(GGCGT)n	Simple_repeat	1	54	(0)	4553426
13	8.1	3.9	0.0	chrX	149939328	149939353	(6101542)	+	(GCGGG)n	Simple_repeat	1	27	(0)	4565178
13	17.6	0.0	2.9	chrX	149939653	149939686	(6101209)	+	(GGCGG)n	Simple_repeat	1	34	(0)	4565179
944	15.6	0.0	0.0	chrX	150897758	150897917	(5142978)	C	MER5A1	DNA/hAT-Charlie	(3)	163	4	4566672
208	35.0	2.8	6.8	chrX	150897992	150898181	(5142714)	C	MER5A	DNA/hAT-Charlie	(7)	182	1	4566673
10092	7.5	9.8	10.3	chrX	151561759	151563344	(4477551)	C	LTR12C	LTR/ERV1	(0)	1579	3	4567810
15008	13.8	1.8	3.0	chrX	151687260	151689046	(4351849)	+	L1M1	LINE/L1	17	1766	(5799)	4567978
33	3.1	0.0	0.0	chrX	151689047	151689079	(4351816)	+	(AG)n	Simple_repeat	1	33	(0)	4567979
15008	13.8	1.8	3.0	chrX	151689080	151689763	(4351132)	+	L1M1	LINE/L1	1767	2457	(5108)	4567978
20	34.4	0.0	0.0	chrX	152733618	152733693	(3307202)	+	(ATCCCC)n	Simple_repeat	1	76	(0)	4569318
13	12.1	0.0	3.5	chrX	153411459	153411487	(2629408)	+	(CCGGC)n	Simple_repeat	1	29	(0)	4570231
14	20.9	0.0	5.5	chrX	153724559	153724631	(2316264)	+	G-rich	Low_complexity	1	68	(0)	4570654
19	12.2	2.8	0.0	chrX	153724921	153724956	(2315939)	+	GA-rich	Low_complexity	1	37	(0)	4570655
11	21.2	0.0	2.9	chrX	154097219	154097253	(1943642)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	4571249
12	29.0	1.6	3.2	chrX	154097422	154097483	(1943412)	+	G-rich	Low_complexity	1	63	(0)	4571250
749	30.9	13.8	1.4	chrX	154308051	154308619	(1732276)	C	L2a	LINE/L2	(95)	3331	2668	4571675
37	16.4	1.1	3.4	chrX	154436813	154436899	(1603996)	+	(GGCGG)n	Simple_repeat	1	88	(0)	4571860
19	8.9	2.6	2.6	chrX	154436933	154436970	(1603925)	+	(CCCGC)n	Simple_repeat	1	39	(0)	4571861
24	24.1	0.0	1.5	chrX	154437168	154437232	(1603663)	+	(GCG)n	Simple_repeat	1	65	(0)	4571862
13	0.0	0.0	0.0	chrX	154490487	154490503	(1550392)	+	(GCG)n	Simple_repeat	1	17	(0)	4571926
19	24.3	1.7	1.6	chrX	154490668	154490727	(1550168)	+	(GCCCC)n	Simple_repeat	1	61	(0)	4571927
16	9.8	0.0	0.0	chrX	154751285	154751306	(1289589)	+	(G)n	Simple_repeat	1	22	(0)	4572376
22	10.4	0.0	0.0	chrX	154806432	154806462	(1234433)	+	(G)n	Simple_repeat	1	31	(0)	4572455
1736	25.3	4.2	2.0	chrX	154806472	154807333	(1233562)	+	L1M5	LINE/L1	4758	5641	(602)	4572456
324	20.9	5.5	6.1	chrX	155026291	155026438	(1014457)	+	Zaphod3	DNA/hAT-Tip100	1789	1935	(688)	4572784
184	29.0	4.6	0.0	chrX	155026506	155026567	(1014328)	+	L2a	LINE/L2	3355	3419	(7)	4572775