17	8.8	0.0	0.0	chr1	8526287	8526310	(240430112)	+	(T)n	Simple_repeat	1	24	(0)	11781
978	26.7	16.8	4.0	chr1	8660893	8661881	(240294541)	C	L2a	LINE/L2	(4)	3422	2274	12013
587	22.5	3.4	3.4	chr1	11354513	11354659	(237601763)	C	LTR105_Mam	LTR/ERVL	(9)	591	445	17523
292	29.3	10.5	4.0	chr1	11354727	11355000	(237601422)	+	L4_A_Mam	LINE/RTE-X	4686	4979	(11)	17524
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
14	21.9	2.3	2.2	chr1	11934781	11934824	(237021598)	+	(TGC)n	Simple_repeat	1	45	(0)	18777
218	30.3	11.6	3.8	chr1	12658792	12658949	(236297473)	+	L2a	LINE/L2	3199	3370	(56)	20180
25	32.2	0.0	3.0	chr1	12658965	12659065	(236297357)	+	(TGAA)n	Simple_repeat	1	101	(0)	20193
1974	13.9	3.2	0.7	chr1	15773862	15774164	(233182258)	+	AluSz	SINE/Alu	2	312	(0)	25998
375	35.2	5.3	1.0	chr1	15774165	15774338	(233182084)	C	L4_A_Mam	LINE/RTE-X	(169)	4821	4636	25997
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
732	22.7	4.6	2.1	chr1	16968444	16968632	(231987790)	C	MIRb	SINE/MIR	(30)	238	45	28391
282	16.7	0.0	0.0	chr1	16968693	16968746	(231987676)	+	L4_C_Mam	LINE/RTE-X	4894	4947	(191)	28392
17	15.8	2.3	2.2	chr1	16968831	16968874	(231987548)	+	GA-rich	Low_complexity	1	45	(0)	28393
386	30.3	11.6	5.9	chr1	17121462	17121647	(231834775)	C	MIR	SINE/MIR	(0)	262	65	28725
330	28.7	12.2	5.0	chr1	17121686	17121922	(231834500)	+	MIRb	SINE/MIR	1	254	(14)	28726
13	24.8	0.0	0.0	chr1	17597106	17597143	(231359279)	+	(CTGCAT)n	Simple_repeat	1	38	(0)	29820
279	19.8	24.7	1.7	chr1	17794534	17794713	(231161709)	+	L4_A_Mam	LINE/RTE-X	4736	4970	(20)	30245
954	21.8	0.9	4.1	chr1	18608723	18608942	(230347480)	+	MER20	DNA/hAT-Charlie	6	218	(1)	32037
330	27.9	3.3	6.4	chr1	18608959	18609115	(230347307)	+	L4_C_Mam	LINE/RTE-X	4884	5035	(103)	32038
713	30.5	9.4	6.4	chr1	19822838	19823331	(229133091)	+	L4_B_Mam	LINE/RTE-X	4370	4874	(67)	34573
2099	15.1	0.3	0.0	chr1	19823332	19823630	(229132792)	C	AluSz6	SINE/Alu	(12)	300	1	34576
814	28.9	3.3	2.7	chr1	21909203	21909536	(227046886)	C	L4_A_Mam	LINE/RTE-X	(1)	4989	4654	38932
193	38.4	3.5	4.3	chr1	22237872	22237988	(226718434)	+	MIRc	SINE/MIR	114	229	(39)	39702
886	25.6	5.8	1.6	chr1	22747988	22748237	(226208185)	+	MIR	SINE/MIR	2	262	(0)	40841
231	23.4	0.0	0.0	chr1	22748269	22748315	(226208107)	+	L4_B_Mam	LINE/RTE-X	4695	4741	(200)	40842
2460	8.6	0.0	0.0	chr1	22748378	22748678	(226207744)	C	AluSg	SINE/Alu	(8)	302	2	40843
356	16.6	0.0	1.9	chr1	23179939	23180025	(225776397)	C	L4_B_Mam	LINE/RTE-X	(200)	4741	4683	41792
665	30.9	1.9	6.0	chr1	23180041	23180245	(225776177)	+	MIR	SINE/MIR	3	207	(55)	41793
13	9.3	0.0	0.0	chr1	23554620	23554642	(225401780)	+	(GAAG)n	Simple_repeat	1	23	(0)	42729
237	28.9	8.2	2.2	chr1	25744001	25744092	(223212330)	+	MIR3	SINE/MIR	84	181	(27)	47749
386	27.3	11.8	0.6	chr1	25744325	25744490	(223211932)	C	Tigger19b	DNA/TcMar-Tigger	(72)	478	292	47750
15	19.1	0.0	6.4	chr1	26111803	26111849	(222844573)	+	(CGG)n	Simple_repeat	1	47	(0)	48599
400	25.9	3.6	0.0	chr1	26865543	26865665	(222090757)	+	MIR3	SINE/MIR	29	159	(49)	50326
13	0.0	0.0	0.0	chr1	27575174	27575190	(221381232)	+	(CCG)n	Simple_repeat	1	17	(0)	52049
14	22.2	5.8	0.0	chr1	27672284	27672335	(221284087)	+	(TCTGCAC)n	Simple_repeat	1	55	(0)	52273
271	25.8	0.0	0.0	chr1	31801194	31801259	(217155163)	+	L4_B_Mam	LINE/RTE-X	4677	4742	(199)	61336
35	0.0	0.0	0.0	chr1	31955940	31955972	(217000450)	+	(ATAA)n	Simple_repeat	1	33	(0)	61708
12	27.6	0.0	0.0	chr1	35192280	35192318	(213764104)	+	(TGG)n	Simple_repeat	1	39	(0)	68202
7043	15.9	6.1	3.6	chr1	36400551	36401780	(212554642)	C	LTR2752	LTR/ERV1	(0)	1263	1	70791
2179	11.0	4.0	0.0	chr1	39191881	39192172	(209764250)	+	AluSz6	SINE/Alu	1	304	(8)	76275
14	14.1	7.7	0.0	chr1	39409005	39409043	(209547379)	+	(GGCGC)n	Simple_repeat	1	42	(0)	76679
12	19.7	2.3	4.4	chr1	39409058	39409101	(209547321)	+	(AGCC)n	Simple_repeat	1	45	(0)	76680
200	23.2	5.1	0.0	chr1	44005661	44005716	(204950706)	+	MIRb	SINE/MIR	110	168	(100)	85267
197	9.4	3.0	0.0	chr1	44005721	44005752	(204950670)	+	L2c	LINE/L2	3373	3405	(21)	85260
17	24.9	3.5	0.0	chr1	44030752	44030808	(204925614)	+	(GGCA)n	Simple_repeat	1	59	(0)	85305
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
16	14.2	0.0	0.0	chr1	44405661	44405691	(204550731)	+	(GGACTG)n	Simple_repeat	1	31	(0)	85974
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
234	23.1	1.0	11.9	chr1	45339770	45339887	(203616535)	+	L2c	LINE/L2	3059	3163	(212)	87767
451	25.9	12.3	2.5	chr1	46198868	46198936	(202757486)	C	MIR	SINE/MIR	(41)	221	147	89530
294	31.4	12.4	5.5	chr1	46340413	46340614	(202615808)	+	L2b	LINE/L2	3009	3226	(149)	89844
220	34.8	5.4	4.8	chr1	46394881	46394927	(202561495)	C	MIR3	SINE/MIR	(6)	202	159	89969
12	20.7	3.1	6.1	chr1	47875393	47875404	(201081018)	+	(AAGGACA)n	Simple_repeat	1	12	(0)	92457
2018	15.1	3.9	0.0	chr1	47875405	47875703	(201080719)	+	AluJr	SINE/Alu	1	311	(1)	92458
259	26.7	9.4	5.6	chr1	51648707	51648849	(197307573)	+	MIR1_Amn	SINE/MIR	68	216	(14)	99177
272	29.2	1.4	0.0	chr1	52703541	52703612	(196252810)	C	MIR3	SINE/MIR	(68)	140	68	101511
1018	13.4	0.0	0.0	chr1	52703632	52703773	(196252649)	+	AluSc8	SINE/Alu	148	289	(22)	101512
2265	11.9	0.3	0.0	chr1	52703783	52704084	(196252338)	+	AluSq2	SINE/Alu	1	303	(10)	101513
384	26.8	6.1	1.3	chr1	53578571	53578725	(195377697)	+	L4_C_Mam	LINE/RTE-X	4845	5007	(131)	103338
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
17	17.4	2.5	0.0	chr1	64470366	64470405	(184486017)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	123959
1564	27.3	7.6	5.2	chr1	65074857	65075510	(183880912)	C	L2	LINE/L2	(1675)	1744	1074	125037
336	27.7	5.1	3.7	chr1	65075673	65075807	(183880615)	+	L2a	LINE/L2	3289	3425	(1)	125030
440	27.9	3.6	2.2	chr1	65264372	65264509	(183691913)	+	L2b	LINE/L2	3258	3386	(1)	125459
291	22.0	4.4	0.0	chr1	66925695	66925791	(182030631)	+	MIR3	SINE/MIR	30	136	(94)	127978
254	31.2	0.0	13.5	chr1	67149488	67149598	(181806824)	+	L2c	LINE/L2	3287	3382	(5)	128317
37	15.9	0.0	0.0	chr1	84078068	84078133	(164878289)	+	(CCG)n	Simple_repeat	1	66	(0)	152037
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
448	26.5	3.3	0.0	chr1	91885013	91885129	(157071293)	C	MIR	SINE/MIR	(22)	240	120	163407
239	33.3	11.3	1.6	chr1	110203244	110203371	(138753051)	C	L2b	LINE/L2	(1)	3374	3233	189730
15	21.8	2.3	0.0	chr1	110243599	110243641	(138712781)	+	GA-rich	Low_complexity	1	44	(0)	189785
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
49	24.3	1.2	4.1	chr1	151458581	151458747	(97497675)	+	(CCCCCG)n	Simple_repeat	1	169	(0)	221252
1828	20.8	11.6	0.5	chr1	153525374	153525755	(95430667)	+	L1PREC2	LINE/L1	719	1148	(7007)	224236
1076	8.6	0.7	0.0	chr1	153525809	153525958	(95430464)	+	MER83	LTR/ERV1	1	151	(297)	224237
2287	16.7	9.8	1.1	chr1	153525959	153526418	(95430004)	C	MER61D	LTR/ERV1	(0)	501	1	224238
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
23	0.0	0.0	0.0	chr1	156525730	156525754	(92430668)	+	(A)n	Simple_repeat	1	25	(0)	230289
215	27.3	3.0	1.5	chr1	156752099	156752165	(92204257)	C	L2c	LINE/L2	(1)	3374	3307	230675
654	30.2	2.8	0.0	chr1	159916219	159916430	(89039992)	+	Chap1_Mam	DNA/hAT-Charlie	1	218	(124)	234955
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
16	20.6	0.0	4.2	chr1	165376796	165376843	(83579579)	+	(CCTC)n	Simple_repeat	1	48	(0)	243522
14	6.9	0.0	10.5	chr1	165827486	165827523	(83128899)	+	G-rich	Low_complexity	1	38	(0)	244381
5335	12.5	2.7	0.6	chr1	167272797	167273623	(81682799)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	787	246454
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
424	33.2	8.2	2.0	chr1	175125515	175125766	(73830656)	C	L1MC4	LINE/L1	(4984)	1231	963	258253
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
267	22.6	16.0	0.0	chr1	182615673	182615756	(66340666)	C	MIR	SINE/MIR	(30)	232	133	269754
309	22.2	0.0	0.0	chr1	182615747	182615809	(66340613)	C	MIR	SINE/MIR	(188)	74	12	269754
236	26.7	8.8	5.2	chr1	182615816	182615969	(66340453)	C	L2a	LINE/L2	(41)	3385	3226	269755
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
21	28.3	0.0	4.0	chr1	200029188	200029261	(48927161)	+	(GC)n	Simple_repeat	1	74	(0)	293523
41	0.0	0.0	0.0	chr1	201480539	201480576	(47475846)	+	(GCGGG)n	Simple_repeat	1	38	(0)	296097
455	23.0	4.4	0.6	chr1	201480658	201480810	(47475612)	+	MER5B	DNA/hAT-Charlie	5	161	(28)	296098
17	24.1	0.0	2.0	chr1	201480833	201480883	(47475539)	+	(GGCGG)n	Simple_repeat	1	51	(0)	296099
13	16.4	5.7	5.4	chr1	201939072	201939124	(47017298)	+	(CCTT)n	Simple_repeat	1	56	(0)	296882
452	26.6	0.9	0.0	chr1	201939244	201939356	(47017066)	C	MIRb	SINE/MIR	(46)	222	109	296883
1679	12.8	5.3	2.7	chr1	202927401	202927696	(46028726)	+	AluJb	SINE/Alu	1	304	(8)	298768
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
348	29.0	7.8	10.1	chr1	206030984	206031221	(42925201)	+	MIRb	SINE/MIR	28	259	(9)	304455
16	0.0	0.0	0.0	chr1	208184749	208184766	(40771656)	+	(AC)n	Simple_repeat	1	18	(0)	307735
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
788	31.3	18.3	1.7	chr1	214568453	214568792	(34387630)	+	L2c	LINE/L2	2012	2444	(975)	317912
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
30	6.3	3.9	1.9	chr1	224434205	224434256	(24522166)	+	(GGA)n	Simple_repeat	1	54	(0)	332549
41	21.7	1.3	6.5	chr1	224434409	224434559	(24521863)	+	G-rich	Low_complexity	1	153	(0)	332550
386	27.4	0.9	0.0	chr1	224624002	224624114	(24332308)	C	L1ME3Cz	LINE/L1	(21)	976	863	332893
15	7.5	0.0	6.2	chr1	225427627	225427658	(23528764)	+	(GCCGC)n	Simple_repeat	1	32	(0)	333956
14	18.3	2.5	2.4	chr1	225427783	225427822	(23528600)	+	GA-rich	Low_complexity	1	41	(0)	333957
3239	16.1	5.7	0.2	chr1	225462619	225463184	(23493238)	+	LTR26	LTR/ERV1	5	603	(0)	334009
184	30.7	22.8	0.0	chr1	225627247	225627555	(23328867)	C	L2	LINE/L2	(963)	2456	2057	334256
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
44	0.0	0.0	0.0	chr1	226711406	226711443	(22244979)	+	(AG)n	Simple_repeat	1	38	(0)	336323
26	3.0	2.9	0.0	chr1	226711444	226711477	(22244945)	+	(TG)n	Simple_repeat	1	35	(0)	336324
20	16.4	0.0	0.0	chr1	228103264	228103304	(20853118)	+	(GCAACCC)n	Simple_repeat	1	41	(0)	338293
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
15	10.0	0.0	0.0	chr1	229158400	229158421	(19798001)	+	(GA)n	Simple_repeat	1	22	(0)	339766
2445	6.9	0.0	2.5	chr1	229343729	229344045	(19612377)	+	AluY	SINE/Alu	1	309	(2)	340088
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
205	37.7	3.3	2.0	chr1	231315720	231315868	(17640554)	+	MIRb	SINE/MIR	57	207	(61)	343281
851	13.8	1.5	0.0	chr1	231316148	231316277	(17640145)	+	FLAM_C	SINE/Alu	4	135	(8)	343282
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
1533	26.0	7.4	3.2	chr1	233635662	233636668	(15319754)	C	L2a	LINE/L2	(0)	3426	2378	346694
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
16	5.3	0.0	0.0	chr1	234746083	234746102	(14210320)	+	(AG)n	Simple_repeat	1	20	(0)	348372
1447	17.7	6.3	0.8	chr1	235082975	235083228	(13873194)	+	AluJo	SINE/Alu	1	269	(43)	348991
14	22.6	3.8	1.8	chr1	235083229	235083267	(13873155)	+	A-rich	Low_complexity	14	54	(0)	348992
56	17.5	4.3	2.0	chr1	235101556	235101729	(13854693)	+	G-rich	Low_complexity	1	177	(0)	349033
15	24.8	4.7	1.5	chr1	235101684	235101747	(13854675)	+	A-rich	Low_complexity	1	67	(0)	349034
299	19.4	0.5	1.7	chr1	235101831	235101912	(13854510)	+	L4_C_Mam	LINE/RTE-X	4895	4966	(172)	349035
494	35.3	5.9	1.7	chr1	235101971	235102374	(13854048)	+	MLT1K	LTR/ERVL-MaLR	10	431	(164)	349036
13	22.1	5.6	1.8	chr1	235327257	235327310	(13629112)	+	(GCCCGGC)n	Simple_repeat	1	57	(0)	349500
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
469	26.8	2.1	4.7	chr1	235917302	235917450	(13038972)	C	MIRb	SINE/MIR	(109)	159	15	350631
15	4.8	0.0	0.0	chr1	236065014	236065035	(12891387)	+	(CAG)n	Simple_repeat	1	22	(0)	350913
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
520	20.9	19.4	0.0	chr1	236141279	236141436	(12814986)	C	Arthur1C	DNA/hAT-Tip100	(81)	282	87	351086
257	27.5	11.8	7.8	chr1	236794837	236794990	(12161432)	C	MIRc	SINE/MIR	(24)	244	84	352267
789	15.8	1.6	0.0	chr1	237154536	237154655	(11801767)	+	FLAM_A	SINE/Alu	3	124	(18)	352844
17	21.6	2.1	0.0	chr1	240091879	240091926	(8864496)	+	(AGCCGC)n	Simple_repeat	1	49	(0)	357136
33	12.3	0.0	0.0	chr1	240092724	240092785	(8863637)	+	(GCA)n	Simple_repeat	1	62	(0)	357138
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
32	12.5	3.3	0.0	chr10	8054764	8054824	(125742598)	+	GA-rich	Low_complexity	1	63	(0)	382058
1854	9.7	1.4	4.2	chr10	16437335	16437622	(117359800)	C	AluJo	SINE/Alu	(11)	301	22	395816
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
49	35.2	6.2	2.0	chr10	29998007	29998439	(103798983)	+	(AC)n	Simple_repeat	1	460	(0)	417874
258	26.3	7.5	0.0	chr10	29998580	29998678	(103798744)	C	L2a	LINE/L2	(0)	3426	3320	417875
182	34.4	6.2	3.2	chr10	34319651	34319776	(99477646)	C	MamRTE1	LINE/RTE-BovB	(1018)	2794	2665	424557
14	4.5	0.0	4.0	chr10	35635626	35635650	(98161772)	+	(TGAA)n	Simple_repeat	1	25	(0)	426866
265	6.2	0.0	0.0	chr10	46030916	46030947	(87766475)	+	L1MB7	LINE/L1	5888	5919	(265)	437046
2275	8.4	1.3	0.3	chr10	46030986	46031283	(87766139)	+	AluSc8	SINE/Alu	1	301	(10)	437047
1082	21.3	7.4	0.0	chr10	48461194	48461470	(85335952)	+	L1ME3A	LINE/L1	5875	6173	(0)	440565
16	9.1	2.6	5.0	chr10	50623872	50623910	(83173512)	+	(CCCGCCG)n	Simple_repeat	1	40	(0)	443660
22	9.4	0.0	0.0	chr10	61751178	61751212	(72046210)	+	(TTGCT)n	Simple_repeat	1	35	(0)	459000
21	0.0	0.0	0.0	chr10	61751214	61751236	(72046186)	+	(T)n	Simple_repeat	1	23	(0)	459001
269	39.4	3.1	0.0	chr10	61751403	61751557	(72045865)	C	L2	LINE/L2	(795)	2624	2465	459002
13	5.2	0.0	0.0	chr10	70145987	70146006	(63651416)	+	(CTC)n	Simple_repeat	1	20	(0)	472841
2564	9.7	1.6	0.0	chr10	70558762	70559133	(63238289)	C	MER83	LTR/ERV1	(70)	378	1	473716
1114	25.4	15.8	1.5	chr10	70559176	70559937	(63237485)	C	L2a	LINE/L2	(260)	3166	2273	473715
2609	19.4	8.1	1.7	chr10	71732971	71733624	(62063798)	C	MER21C	LTR/ERVL	(152)	786	1	475810
336	25.3	3.2	1.1	chr10	71733625	71733716	(62063706)	+	L4_C_Mam	LINE/RTE-X	4872	4965	(173)	475811
404	26.1	6.9	0.0	chr10	71860652	71860785	(61936637)	C	Charlie4z	DNA/hAT-Charlie	(19)	148	5	476035
597	14.6	0.0	0.0	chr10	77587050	77587138	(56210284)	+	5S	rRNA	2	90	(31)	486210
324	20.0	6.2	0.0	chr10	84537798	84537872	(49259550)	C	L4_C_Mam	LINE/RTE-X	(203)	4935	4856	497003
410	21.3	19.1	0.8	chr10	86757718	86757845	(47039577)	C	MIR	SINE/MIR	(59)	203	47	500084
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
470	13.1	0.0	0.0	chr10	95308899	95308959	(38488463)	C	AluYb8	SINE/Alu	(257)	61	1	514071
40	0.0	2.4	2.3	chr10	96229655	96229696	(37567726)	+	(TG)n	Simple_repeat	1	43	(0)	515592
874	28.0	3.1	3.5	chr10	96419816	96420133	(37377289)	+	L4_A_Mam	LINE/RTE-X	4674	4990	(0)	515930
15	24.3	1.8	3.5	chr10	101131171	101131227	(32666195)	+	(CCCTC)n	Simple_repeat	1	58	(0)	524524
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
12	15.3	5.3	2.5	chr10	101695111	101695148	(32102274)	+	(GCCCGA)n	Simple_repeat	1	40	(0)	525478
424	27.5	4.1	4.1	chr10	104294024	104294269	(29503153)	+	L4_B_Mam	LINE/RTE-X	4693	4938	(3)	530485
15	30.5	1.7	0.0	chr10	110207133	110207192	(23590230)	+	(GTGT)n	Simple_repeat	1	61	(0)	539101
296	24.3	0.0	2.8	chr10	110207270	110207341	(23590081)	C	MIRb	SINE/MIR	(4)	264	195	539102
198	26.1	0.0	0.0	chr10	110221958	110222003	(23575419)	C	UCON80_AMi	Unknown	(32)	190	145	539131
592	30.8	6.0	0.8	chr10	110513409	110513660	(23283762)	+	L4_A_Mam	LINE/RTE-X	4626	4891	(99)	539661
240	29.5	1.3	1.3	chr10	110916520	110916598	(22880824)	C	AmnSINE1	SINE/5S-Deu-L2	(181)	394	316	540368
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
34	6.8	0.0	0.0	chr10	116273635	116273646	(17523776)	+	(CA)n	Simple_repeat	1	12	(0)	548528
52	2.1	0.0	0.0	chr10	116273647	116273695	(17523727)	+	(CT)n	Simple_repeat	1	49	(0)	548529
34	6.8	0.0	0.0	chr10	116273696	116273729	(17523693)	+	(CA)n	Simple_repeat	1	34	(0)	548530
677	28.7	4.4	0.5	chr10	117723789	117723984	(16073438)	+	L4_B_Mam	LINE/RTE-X	4574	4777	(164)	550969
2078	10.3	3.7	0.3	chr10	117724078	117724387	(16073035)	+	L1PA10	LINE/L1	5848	6168	(0)	550970
894	30.4	6.7	6.2	chr10	121074457	121074728	(12722694)	C	L2a	LINE/L2	(3)	3423	3126	556596
405	21.4	7.6	2.7	chr10	121974358	121974506	(11822916)	C	MER5A	DNA/hAT-Charlie	(1)	188	32	558053
18	10.5	0.0	0.0	chr10	121975069	121975099	(11822323)	+	(GGGAGC)n	Simple_repeat	1	31	(0)	558054
14	15.2	0.0	7.1	chr10	121975098	121975152	(11822270)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	558055
12	24.2	3.5	3.4	chr10	121975232	121975288	(11822134)	+	(GCGCCA)n	Simple_repeat	1	59	(0)	558056
2202	8.8	0.0	4.4	chr10	122101552	122101871	(11695551)	C	AluY	SINE/Alu	(0)	311	1	558324
741	17.5	0.0	0.0	chr10	122101958	122102077	(11695345)	C	Tigger3c	DNA/TcMar-Tigger	(0)	602	483	558325
303	22.4	1.5	0.0	chr10	122497174	122497240	(11300182)	+	L4_C_Mam	LINE/RTE-X	4862	4929	(209)	558966
322	28.8	1.7	8.3	chr10	122549974	122550227	(11247195)	+	L4_A_Mam	LINE/RTE-X	4737	4973	(17)	559042
314	34.2	10.2	0.0	chr10	124354502	124354650	(9442772)	C	MIRb	SINE/MIR	(69)	199	34	561750
278	13.9	0.0	0.0	chr10	124595558	124595600	(9201822)	+	L4_C_Mam	LINE/RTE-X	4895	4937	(201)	562201
428	15.4	28.9	0.8	chr10	128632230	128632353	(5165069)	C	MER96	DNA/hAT-Tip100	(0)	175	3	567631
1118	29.1	14.4	4.2	chr11	6604474	6605505	(128481117)	C	L2c	LINE/L2	(209)	3178	2021	581572
320	32.2	11.0	4.2	chr11	9137978	9138265	(125948357)	C	L2b	LINE/L2	(27)	3348	3039	585069
461	32.6	3.1	9.5	chr11	11382271	11382649	(123703973)	+	L4_C_Mam	LINE/RTE-X	4598	4951	(187)	589098
20	20.5	1.3	6.5	chr11	16606964	16607004	(118479618)	+	(CTCCCC)n	Simple_repeat	1	75	(0)	597234
16	9.8	6.1	0.0	chr11	16607005	16607037	(118479585)	+	(CCT)n	Simple_repeat	1	35	(0)	597235
13	15.0	2.4	4.8	chr11	16607057	16607097	(118479525)	+	(CGCCCGG)n	Simple_repeat	1	42	(0)	597236
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
735	30.8	7.0	6.5	chr11	32177149	32177525	(102909097)	C	L4_C_Mam	LINE/RTE-X	(6)	5132	4752	621125
2085	14.9	0.0	0.0	chr11	32177526	32177827	(102908795)	C	AluSz6	SINE/Alu	(6)	306	5	621126
485	26.3	8.6	1.7	chr11	44271295	44271468	(90815154)	+	MIR3	SINE/MIR	18	204	(4)	639806
444	24.3	16.2	0.5	chr11	44271470	44271692	(90814930)	+	L4_C_Mam	LINE/RTE-X	4855	5119	(19)	639807
17	19.5	0.0	0.0	chr11	44271698	44271728	(90814894)	+	(GT)n	Simple_repeat	1	31	(0)	639808
301	27.3	6.2	3.9	chr11	44357691	44357846	(90728776)	+	L4_C_Mam	LINE/RTE-X	4860	5019	(119)	639961
266	31.8	1.2	0.0	chr11	44607244	44607328	(90479294)	C	L4_C_Mam	LINE/RTE-X	(176)	4962	4877	640464
17254	5.6	1.3	0.7	chr11	47118178	47119591	(87967031)	C	L1PA6	LINE/L1	(4751)	1433	3	645276
261	31.6	4.9	1.3	chr11	57568015	57568171	(77518451)	C	MamRep1879	DNA/hAT-Tip100?	(49)	167	5	654006
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
434	26.1	1.7	0.9	chr11	60775350	60775465	(74311157)	+	L2a	LINE/L2	3305	3421	(5)	658837
359	27.4	7.3	1.3	chr11	61047667	61047821	(74038801)	+	L4_A_Mam	LINE/RTE-X	4462	4626	(364)	659391
391	23.7	5.6	2.9	chr11	61047832	61047970	(74038652)	+	L4_A_Mam	LINE/RTE-X	4746	4888	(102)	659391
196	28.4	6.3	0.0	chr11	64320386	64320469	(70766153)	C	L2c	LINE/L2	(38)	3349	3260	665378
427	19.8	1.1	0.0	chr11	64320478	64320563	(70766059)	C	L4_C_Mam	LINE/RTE-X	(196)	4942	4856	665379
26	0.0	0.0	0.0	chr11	67266652	67266676	(67819946)	+	(GCG)n	Simple_repeat	1	25	(0)	671333
15	28.1	2.4	4.7	chr11	67266828	67266911	(67819711)	+	(CCCCGA)n	Simple_repeat	1	86	(0)	671334
361	25.4	0.0	0.0	chr11	67519346	67519436	(67567186)	+	L4_A_Mam	LINE/RTE-X	4733	4808	(182)	671792
422	36.2	6.0	0.0	chr11	67519499	67519716	(67566906)	+	MIRb	SINE/MIR	7	238	(30)	671793
220	20.3	12.3	3.0	chr11	69296926	69297024	(65789598)	C	MIRb	SINE/MIR	(38)	230	108	674859
268	25.8	2.3	2.8	chr11	69297061	69297207	(65789415)	+	L4_A_Mam	LINE/RTE-X	4723	5016	(122)	674860
227	13.3	2.2	0.0	chr11	69915168	69915212	(65171410)	C	L4_A_Mam	LINE/RTE-X	(197)	4793	4748	675948
417	25.4	8.6	5.7	chr11	71211995	71212186	(63874436)	+	L4_C_Mam	LINE/RTE-X	4737	4934	(204)	677878
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
12	25.6	0.0	0.0	chr11	124876298	124876334	(10210288)	+	G-rich	Low_complexity	1	37	(0)	763704
21	16.4	0.0	0.0	chr12	389549	389590	(132885719)	+	(CGAGG)n	Simple_repeat	1	42	(0)	778653
1564	10.6	17.5	0.0	chr12	2813042	2813286	(130462023)	C	AluSx1	SINE/Alu	(15)	297	1	782699
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
7666	13.0	2.8	1.2	chr12	7641855	7642913	(125632396)	+	HUERS-P3-int	LTR/ERV1	2164	3252	(5667)	790594
825	21.7	0.7	0.0	chr12	7642917	7643059	(125632250)	+	HUERS-P3-int	LTR/ERV1	4539	4682	(4237)	790594
4493	11.1	3.8	2.0	chr12	7643061	7643281	(125632028)	+	HUERS-P3-int	LTR/ERV1	4901	5127	(3792)	790594
777	21.4	1.7	1.1	chr12	13098876	13099050	(120176259)	+	Arthur1A	DNA/hAT-Tip100	1	176	(1)	799369
12	19.3	4.7	2.2	chr12	24562109	24562151	(108713158)	+	(CCACCTC)n	Simple_repeat	1	45	(0)	815078
33	6.5	2.0	2.0	chr12	24562449	24562498	(108712811)	+	(TG)n	Simple_repeat	1	51	(0)	815079
16	22.7	3.4	1.6	chr12	24562499	24562550	(108712759)	+	(TCGC)n	Simple_repeat	3	55	(0)	815080
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
19	23.4	5.6	3.2	chr12	25251107	25251196	(108024113)	+	G-rich	Low_complexity	1	95	(0)	816205
1815	22.1	10.0	4.2	chr12	31749069	31749596	(101525713)	C	LTR8B	LTR/ERV1	(0)	820	259	825964
328	24.4	14.0	0.0	chr12	31749593	31749678	(101525631)	C	PrimLTR79	LTR/ERV1	(202)	301	202	825965
1735	8.4	0.0	0.0	chr12	31749679	31749893	(101525416)	C	AluSc8	SINE/Alu	(3)	308	94	825966
320	25.2	14.9	0.0	chr12	40727804	40727906	(92547403)	C	LTR16A1	LTR/ERVL	(49)	407	287	834100
463	32.9	3.4	9.4	chr12	40728136	40728517	(92546792)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	151	834101
478	22.4	2.7	6.5	chr12	41846875	41847027	(91428282)	+	UCON48	Unknown	7	153	(111)	835580
22	21.4	1.3	6.2	chr12	49367401	49367479	(83907830)	+	(GGC)n	Simple_repeat	1	80	(0)	847046
396	37.0	4.0	1.6	chr12	50084770	50085011	(83190298)	+	MIRc	SINE/MIR	18	265	(3)	848383
14	24.9	0.0	0.0	chr12	50085032	50085070	(83190239)	+	G-rich	Low_complexity	1	39	(0)	848384
12	30.5	0.0	5.6	chr12	54391299	54391369	(78883940)	+	G-rich	Low_complexity	1	71	(0)	856367
36	19.9	2.1	7.6	chr12	56189476	56189616	(77085693)	+	(GCC)n	Simple_repeat	1	144	(0)	859049
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
366	23.8	3.7	3.7	chr12	64609274	64609382	(68665927)	+	MIRc	SINE/MIR	102	210	(58)	871473
13	16.4	0.0	5.3	chr12	69008082	69008119	(64267190)	+	(CTCCTT)n	Simple_repeat	1	38	(0)	878498
32	0.0	0.0	0.0	chr12	69008135	69008164	(64267145)	+	(CAAAA)n	Simple_repeat	1	30	(0)	878499
12	7.9	7.4	0.0	chr12	71439625	71439651	(61835658)	+	(CTGC)n	Simple_repeat	1	29	(0)	882309
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
17	16.9	2.0	3.9	chr12	76084621	76084670	(57190639)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	888581
2410	27.5	3.0	7.0	chr12	76704554	76705643	(56569666)	+	L2a	LINE/L2	2258	3297	(129)	889717
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
389	23.1	20.1	2.5	chr12	96031614	96031857	(37243452)	+	L4_A_Mam	LINE/RTE-X	4677	4974	(16)	918296
211	32.0	4.0	2.0	chr12	108128930	108129028	(25146281)	C	L2a	LINE/L2	(20)	3406	3306	939534
308	28.3	6.0	1.9	chr12	108129007	108129183	(25146126)	C	MIRb	SINE/MIR	(10)	258	74	939535
16	14.3	2.4	4.7	chr12	108129284	108129325	(25145984)	+	(GGC)n	Simple_repeat	1	43	(0)	939536
762	28.5	5.8	1.7	chr12	108838747	108839042	(24436267)	+	L4_A_Mam	LINE/RTE-X	4657	4965	(25)	941093
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
275	38.6	2.3	3.8	chr12	109261270	109261401	(24013908)	C	L2b	LINE/L2	(0)	3375	3246	942141
2438	10.6	0.0	0.0	chr12	109261589	109261899	(24013410)	+	AluSz	SINE/Alu	1	311	(1)	942142
14	17.6	0.0	4.8	chr12	109309737	109309778	(23965531)	+	(GGCGCGG)n	Simple_repeat	1	42	(0)	942260
566	27.5	4.3	3.4	chr12	109652040	109652246	(23623063)	C	L4_A_Mam	LINE/RTE-X	(166)	4824	4616	942972
535	32.0	8.1	11.1	chr12	109685428	109685915	(23589394)	C	L4_C_Mam	LINE/RTE-X	(146)	4992	4521	943070
979	16.8	5.5	0.0	chr12	111434159	111434366	(21840943)	C	L1MB7	LINE/L1	(20)	6164	5945	947100
509	37.8	4.8	1.2	chr12	111434458	111434776	(21840533)	C	L1ME4c	LINE/L1	(849)	5297	4967	947095
2314	10.0	0.0	1.3	chr12	111443909	111444219	(21831090)	+	AluSx1	SINE/Alu	1	307	(5)	947121
395	27.0	2.5	1.7	chr12	111444298	111444414	(21830895)	C	L4_A_Mam	LINE/RTE-X	(183)	4807	4690	947122
209	19.7	17.4	0.0	chr12	113162087	113162157	(20113152)	+	MIRb	SINE/MIR	167	252	(16)	950935
321	27.4	0.0	0.0	chr12	113422146	113422229	(19853080)	+	MIRc	SINE/MIR	65	148	(120)	951560
235	28.4	1.3	1.3	chr12	113879705	113879779	(19395530)	+	L4_C_Mam	LINE/RTE-X	4892	4966	(172)	952678
277	31.1	3.3	6.9	chr12	113879855	113880013	(19395296)	+	LTR33A	LTR/ERVL	123	275	(245)	952679
241	11.4	0.0	0.0	chr12	116706622	116706656	(16568653)	+	L4_C_Mam	LINE/RTE-X	4892	4926	(212)	958744
319	20.8	15.1	0.0	chr12	116819745	116819840	(16455469)	C	L1ME3	LINE/L1	(1)	6161	6049	959021
1356	16.1	1.9	9.2	chr12	116819848	116820085	(16455224)	C	MER33	DNA/hAT-Charlie	(4)	320	101	959022
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
2507	7.7	0.0	0.0	chr12	121006656	121006952	(12268357)	+	AluY	SINE/Alu	1	297	(14)	968351
441	29.0	9.1	3.8	chr12	121006953	121007119	(12268190)	C	L4_A_Mam	LINE/RTE-X	(70)	4920	4737	968350
699	21.8	4.8	0.0	chr12	121007177	121007355	(12267954)	C	L1MD2	LINE/L1	(0)	6359	6172	968352
263	17.1	1.9	1.4	chr12	121809484	121809543	(11465766)	C	L4_B_Mam	LINE/RTE-X	(202)	4739	4697	970361
235	34.0	0.0	1.0	chr12	121811009	121811106	(11464203)	C	L4_C_Mam	LINE/RTE-X	(186)	4952	4856	970363
323	31.6	10.2	0.0	chr12	122864360	122864536	(10410773)	C	L4_A_Mam	LINE/RTE-X	(167)	4823	4627	972829
407	26.9	6.0	1.2	chr12	123118468	123118640	(10156669)	C	L4_C_Mam	LINE/RTE-X	(188)	4950	4769	973339
17	13.1	0.0	0.0	chr12	124518202	124518227	(8757082)	+	(A)n	Simple_repeat	1	26	(0)	976196
359	25.0	4.9	1.7	chr12	124559628	124559842	(8715467)	C	L4_B_Mam	LINE/RTE-X	(32)	4958	4684	976275
548	21.2	0.9	0.0	chr12	124875752	124875864	(8399445)	+	Zaphod3	DNA/hAT-Tip100	98	211	(2412)	977026
470	14.3	0.0	0.0	chr12	124875867	124875936	(8399373)	+	MER58A	DNA/hAT-Charlie	3	72	(152)	977027
829	23.8	3.6	0.0	chr12	124875937	124876121	(8399188)	+	MER58A	DNA/hAT-Charlie	33	224	(0)	977028
99	15.4	3.3	1.8	chr12	124883228	124883437	(8391872)	+	GA-rich	Low_complexity	1	217	(0)	977052
489	23.7	1.7	0.0	chr12	124883438	124883551	(8391758)	+	MER5A	DNA/hAT-Charlie	61	176	(13)	977053
257	32.7	6.1	9.5	chr12	125064954	125065122	(8210187)	+	L2a	LINE/L2	3259	3421	(5)	977496
13	28.9	0.0	5.7	chr12	131949668	131949737	(1325572)	+	(GCCCC)n	Simple_repeat	1	70	(0)	988881
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
16	31.1	0.0	0.0	chr13	42048809	42048863	(72315465)	+	(CGC)n	Simple_repeat	1	55	(0)	1026762
346	31.9	6.6	2.9	chr13	45781989	45782162	(68582166)	+	Plat_L3	LINE/CR1	3127	3307	(279)	1032822
1441	9.3	0.4	13.6	chr13	52968370	52968563	(61395765)	+	L1PB2	LINE/L1	5913	6087	(64)	1043977
13	13.4	6.1	0.0	chr13	97141833	97141865	(17222463)	+	(CAGAGG)n	Simple_repeat	1	35	(0)	1102578
349	15.8	0.0	0.0	chr13	98783466	98783522	(15580806)	+	L4_B_Mam	LINE/RTE-X	4695	4751	(190)	1105229
15993	10.2	5.9	2.4	chr13	99181494	99183480	(15180848)	C	MER4-int	LTR/ERV1	(2)	6596	4559	1105849
12	23.4	4.6	4.4	chr13	100089149	100089213	(14275115)	+	(CGCTGG)n	Simple_repeat	1	68	(0)	1107378
740	0.0	0.0	0.0	chr14	20625370	20625451	(86418267)	+	tRNA-Leu-CTA_	tRNA	1	82	(3)	1128366
11	10.0	5.7	2.7	chr14	20633079	20633108	(86410610)	+	(TTCTCT)n	Simple_repeat	5	35	(0)	1128378
13	17.6	0.0	2.9	chr14	34873685	34873718	(72170000)	+	(CCCTTC)n	Simple_repeat	1	34	(0)	1148820
12	18.3	6.7	2.1	chr14	54566171	54566215	(52477503)	+	(GCACC)n	Simple_repeat	1	48	(0)	1176154
236	26.5	6.7	2.0	chr14	59252906	59253005	(47790713)	+	L4_C_Mam	LINE/RTE-X	4840	4944	(194)	1183486
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
12	17.0	2.9	2.8	chr14	60724447	60724481	(46319237)	+	(CCTCC)n	Simple_repeat	1	36	(0)	1185460
258	34.9	0.7	11.3	chr14	64671895	64672028	(42371690)	+	MIRb	SINE/MIR	35	155	(113)	1191722
14	13.2	2.9	2.8	chr14	67515085	67515119	(39528599)	+	G-rich	Low_complexity	1	36	(0)	1196211
34	0.0	0.0	0.0	chr14	67515408	67515438	(39528280)	+	(CGG)n	Simple_repeat	1	31	(0)	1196212
12	3.8	6.5	6.1	chr14	68793489	68793519	(38250199)	+	(GTT)n	Simple_repeat	1	33	(0)	1198273
307	29.1	7.1	3.0	chr14	76639423	76639624	(30404094)	+	MER113	DNA/hAT-Charlie	305	515	(6)	1212653
271	22.9	0.0	0.0	chr14	76639643	76639690	(30404028)	+	L4_A_Mam	LINE/RTE-X	4740	4787	(203)	1212654
12	12.0	0.0	6.5	chr14	76812884	76812914	(30230804)	+	(GCCCG)n	Simple_repeat	1	31	(0)	1212987
368	24.0	7.8	2.3	chr14	76813106	76813237	(30230481)	+	MIR3	SINE/MIR	55	194	(14)	1212988
913	29.9	5.9	7.9	chr14	89259179	89259647	(17784071)	+	L4_A_Mam	LINE/RTE-X	4521	4979	(11)	1231760
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
299	21.7	6.2	1.9	chr14	92347404	92347511	(14696207)	+	L4_C_Mam	LINE/RTE-X	4838	4950	(188)	1237390
414	24.2	1.0	2.0	chr14	94827455	94827555	(12216163)	C	L4_B_Mam	LINE/RTE-X	(206)	4735	4636	1241910
287	28.1	4.4	3.5	chr14	95515999	95516155	(11527563)	C	MIRc	SINE/MIR	(49)	159	8	1243178
494	31.1	8.7	2.9	chr14	97226087	97226367	(9817351)	+	L4_C_Mam	LINE/RTE-X	4630	4928	(210)	1246322
1975	18.4	5.0	2.2	chr14	97226450	97226987	(9816731)	+	MLT2A2	LTR/ERVL	1	554	(0)	1246323
724	22.8	7.2	4.0	chr14	99206884	99206956	(7836762)	+	MER58A	DNA/hAT-Charlie	144	210	(14)	1249671
362	25.0	10.3	0.7	chr14	99206964	99207112	(7836606)	+	L4_C_Mam	LINE/RTE-X	4772	4936	(202)	1249673
1526	28.0	5.3	2.5	chr14	99654219	99654625	(7389093)	C	LTR33A_	LTR/ERVL	(102)	429	2	1250372
355	29.1	16.2	3.0	chr14	99654670	99654903	(7388815)	C	L4_C_Mam	LINE/RTE-X	(140)	4998	4728	1250374
285	32.0	13.2	1.5	chr14	100476592	100476791	(6566927)	+	MIRb	SINE/MIR	28	254	(14)	1251926
1882	23.9	3.1	0.8	chr14	100698918	100699422	(6344296)	C	MER89	LTR/ERV1	(0)	559	43	1252280
2866	1.9	0.0	0.0	chr14	100699577	100699891	(6343827)	+	AluYb8	SINE/Alu	1	315	(3)	1252281
12	18.4	5.4	0.0	chr14	102087355	102087391	(4956327)	+	(CCGCCCT)n	Simple_repeat	1	39	(0)	1254195
256	27.4	4.5	0.0	chr14	102087766	102087849	(4955869)	C	CR1_Mam	LINE/CR1	(52)	2152	2065	1254196
406	23.9	15.1	8.4	chr14	102155600	102155777	(4887941)	+	Charlie4a	DNA/hAT-Charlie	2	193	(315)	1254362
12	26.4	3.8	4.9	chr14	104933598	104933676	(2110042)	+	(GGACAGG)n	Simple_repeat	1	82	(0)	1259013
261	12.0	3.9	0.0	chr14	105157539	105157588	(1886130)	C	L4_B_Mam	LINE/RTE-X	(195)	4746	4695	1259340
19	12.7	4.7	0.0	chr15	34515076	34515118	(67476071)	+	(CCCCTCA)n	Simple_repeat	1	45	(0)	1282967
61	0.0	0.0	0.0	chr15	34515281	34515332	(67475857)	+	(CT)n	Simple_repeat	1	52	(0)	1282968
38	0.0	0.0	0.0	chr15	34515333	34515374	(67475815)	+	(GT)n	Simple_repeat	1	42	(0)	1282969
578	19.2	3.0	3.7	chr15	35700957	35701091	(66290098)	+	L4_A_Mam	LINE/RTE-X	4696	4829	(161)	1284713
340	28.2	3.0	3.2	chr15	35701182	35701307	(66289882)	+	MIR3	SINE/MIR	56	183	(25)	1284714
12	22.6	0.0	2.6	chr15	40091660	40091697	(61899492)	+	A-rich	Low_complexity	1	38	(0)	1290670
12	23.1	5.1	3.2	chr15	42491090	42491148	(59500041)	+	(CCGCCG)n	Simple_repeat	1	62	(0)	1295211
15	19.6	0.0	0.0	chr15	59401771	59401799	(42589390)	+	(T)n	Simple_repeat	1	29	(0)	1321992
12	10.0	0.0	0.0	chr15	59401919	59401940	(42589249)	+	(CTTT)n	Simple_repeat	1	22	(0)	1321993
14	4.5	0.0	4.0	chr15	59997380	59997404	(41993785)	+	(CTTT)n	Simple_repeat	1	25	(0)	1323095
33	17.9	0.0	0.0	chr15	59997468	59997526	(41993663)	+	GA-rich	Low_complexity	1	59	(0)	1323096
16	25.4	1.7	3.3	chr15	60004161	60004220	(41986969)	+	(CCT)n	Simple_repeat	1	61	(0)	1323102
566	15.2	0.0	0.0	chr15	65303653	65303744	(36687445)	+	AluJr	SINE/Alu	1	92	(220)	1332343
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
396	30.6	2.2	0.7	chr15	65401262	65401396	(36589793)	+	MIR3	SINE/MIR	23	159	(49)	1332535
11	9.7	8.6	2.6	chr15	65401592	65401626	(36589563)	+	G-rich	Low_complexity	1	38	(0)	1332536
407	28.8	4.6	2.7	chr15	65824176	65824325	(36166864)	C	MIRb	SINE/MIR	(112)	156	4	1333414
491	19.9	16.9	4.3	chr15	65824397	65824606	(36166583)	+	MIRc	SINE/MIR	3	244	(24)	1333415
205	31.7	16.1	0.0	chr15	66698693	66698832	(35292357)	C	MIRb	SINE/MIR	(73)	195	23	1335288
12	22.4	2.7	0.0	chr15	66701480	66701516	(35289673)	+	(CCGG)n	Simple_repeat	1	38	(0)	1335296
308	23.3	0.0	1.4	chr15	66862878	66862951	(35128238)	+	MIR3	SINE/MIR	106	178	(30)	1335605
16	14.2	5.1	0.0	chr15	66863082	66863120	(35128069)	+	(GTGTGC)n	Simple_repeat	1	41	(0)	1335606
706	24.4	1.8	6.5	chr15	67177130	67177361	(34813828)	+	L4_B_Mam	LINE/RTE-X	4588	4808	(133)	1336207
16	19.2	0.0	9.4	chr15	67823594	67823657	(34167532)	+	(CCG)n	Simple_repeat	1	64	(0)	1337184
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
39	30.9	2.7	2.1	chr15	68229676	68229860	(33761329)	+	G-rich	Low_complexity	1	190	(0)	1337961
337	27.3	5.3	1.4	chr15	68320682	68320826	(33670363)	+	L4_C_Mam	LINE/RTE-X	4887	5037	(101)	1338131
723	22.8	6.7	7.8	chr15	68546955	68547273	(33443916)	C	L4_A_Mam	LINE/RTE-X	(3)	4987	4673	1338533
1222	22.2	11.3	0.6	chr15	68559886	68560225	(33430964)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	42	1338559
13	23.2	2.1	2.1	chr15	68579336	68579382	(33411807)	+	G-rich	Low_complexity	1	48	(0)	1338606
375	28.6	13.3	4.9	chr15	69893729	69893974	(32097215)	C	LTR88b	LTR/Gypsy?	(425)	391	122	1341099
464	27.5	5.9	1.2	chr15	70388713	70388903	(31602286)	+	L4_A_Mam	LINE/RTE-X	4675	4936	(202)	1342052
32	0.0	7.5	0.0	chr15	70854226	70854265	(31136924)	+	(CGC)n	Simple_repeat	1	43	(0)	1342867
549	21.7	9.8	6.4	chr15	71569440	71569675	(30421514)	C	L4_A_Mam	LINE/RTE-X	(1)	4989	4745	1343962
2319	13.4	0.0	0.0	chr15	71569712	71570010	(30421179)	+	AluSz	SINE/Alu	1	299	(13)	1343963
14	23.4	3.0	5.8	chr15	73052019	73052085	(28939104)	+	GA-rich	Low_complexity	1	69	(0)	1346523
245	23.1	0.0	0.0	chr15	74196280	74196331	(27794858)	C	L2a	LINE/L2	(0)	3426	3375	1348429
375	29.2	5.5	0.0	chr15	74813715	74813834	(27177355)	C	L4_A_Mam	LINE/RTE-X	(153)	4837	4711	1349574
2253	11.0	0.0	0.3	chr15	74813845	74814144	(27177045)	+	AluSc	SINE/Alu	1	299	(10)	1349575
189	26.9	25.8	2.0	chr15	74835244	74835440	(27155749)	C	MIRb	SINE/MIR	(6)	262	3	1349608
1748	15.2	4.4	0.0	chr15	75903475	75903756	(26087433)	+	AluJb	SINE/Alu	2	296	(16)	1351719
261	26.4	4.2	3.2	chr15	79080087	79080180	(22911009)	+	L4_C_Mam	LINE/RTE-X	4831	4925	(213)	1357203
15	12.7	6.4	4.0	chr15	81000953	81000999	(20990190)	+	(CGGCGG)n	Simple_repeat	1	50	(0)	1360519
26	0.0	0.0	0.0	chr15	83207683	83207707	(18783482)	+	(CCG)n	Simple_repeat	1	25	(0)	1364239
278	27.8	17.1	0.1	chr15	85401981	85402101	(16589088)	+	MIR1_Amn	SINE/MIR	14	156	(52)	1367768
20	28.8	4.4	2.5	chr15	88639010	88639123	(13352066)	+	(GCAGCG)n	Simple_repeat	1	119	(0)	1372728
13	23.2	0.0	2.4	chr15	92714586	92714627	(9276562)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	1380277
460	30.6	7.5	3.2	chr15	101494816	101495068	(496121)	+	L4_B_Mam	LINE/RTE-X	4491	4755	(186)	1392861
474	32.2	14.7	4.4	chr15	101495088	101495595	(495594)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	50	1392862
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
233	32.7	17.6	0.6	chr16	1016206	1016409	(89321936)	+	MIR	SINE/MIR	10	257	(11)	1395410
17	13.7	0.0	0.0	chr16	1773265	1773296	(88565049)	+	(GCCGGG)n	Simple_repeat	1	32	(0)	1396373
50	0.0	0.0	0.0	chr16	1951727	1951771	(88386574)	+	(ATT)n	Simple_repeat	1	45	(0)	1396700
232	31.1	13.1	0.0	chr16	1951799	1951917	(88386428)	+	L4_B_Mam	LINE/RTE-X	4600	4736	(205)	1396701
2029	10.9	0.7	7.1	chr16	1951942	1952263	(88386082)	C	AluSx1	SINE/Alu	(3)	309	9	1396702
18	0.0	0.0	6.7	chr16	3106652	3106681	(87231664)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1398512
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
652	0.0	0.0	0.0	chr16	3158922	3158993	(87179352)	+	tRNA-Pro-CCA	tRNA	1	72	(3)	1398615
2018	10.1	1.4	1.7	chr16	3182232	3182528	(87155817)	+	AluSx	SINE/Alu	3	298	(14)	1398677
622	0.0	0.0	0.0	chr16	3182635	3182706	(87155639)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1398678
2473	4.4	0.0	5.4	chr16	3265202	3265516	(87072829)	C	AluY	SINE/Alu	(13)	298	1	1398856
189	29.1	0.0	0.0	chr16	3772397	3772451	(86565894)	+	MER5B	DNA/hAT-Charlie	1	55	(123)	1399791
758	25.1	9.4	0.0	chr16	3772475	3772677	(86565668)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1399792
1894	16.3	0.7	1.6	chr16	4931088	4931394	(85406951)	+	AluJo	SINE/Alu	7	310	(2)	1402164
816	27.4	12.9	4.8	chr16	8371285	8371825	(81966520)	C	L4_A_Mam	LINE/RTE-X	(0)	4990	4400	1408892
381	30.3	0.7	2.7	chr16	8568018	8568163	(81770182)	+	MIRb	SINE/MIR	2	144	(124)	1409295
310	9.1	0.0	0.0	chr16	8573522	8573565	(81764780)	C	L4_B_Mam	LINE/RTE-X	(203)	4738	4695	1409309
202	32.7	0.0	0.0	chr16	8573590	8573644	(81764701)	C	L2b	LINE/L2	(2)	3385	3331	1409310
390	31.4	6.5	13.7	chr16	8573683	8573996	(81764349)	+	L2c	LINE/L2	3098	3387	(0)	1409311
430	33.0	6.2	1.5	chr16	8856249	8856448	(81481897)	+	L4_A_Mam	LINE/RTE-X	4620	4829	(161)	1409982
14	10.9	5.0	9.5	chr16	8963818	8963877	(81374468)	+	(TCGGCG)n	Simple_repeat	1	63	(0)	1410168
32	16.0	7.9	1.8	chr16	8963924	8964025	(81374320)	+	(CGCGGAG)n	Simple_repeat	1	108	(0)	1410169
277	41.1	0.0	0.0	chr16	9455677	9455822	(80882523)	+	L2c	LINE/L2	3020	3165	(222)	1411381
333	24.8	12.9	2.6	chr16	9455853	9456005	(80882340)	+	L4_A_Mam	LINE/RTE-X	4730	4900	(90)	1411388
350	20.0	10.7	0.0	chr16	10908758	10908832	(79429513)	C	L4_B_Mam	LINE/RTE-X	(161)	4780	4697	1414534
722	33.6	2.5	7.2	chr16	11432585	11432996	(78905349)	+	L4_A_Mam	LINE/RTE-X	4527	4925	(65)	1415660
556	32.6	8.2	3.7	chr16	11607224	11607666	(78730679)	+	L4_A_Mam	LINE/RTE-X	4463	4975	(15)	1416085
447	25.9	6.2	0.0	chr16	11958943	11959077	(78379268)	C	LTR33C	LTR/ERVL	(207)	422	279	1416912
1381	14.5	6.6	5.6	chr16	19087031	19087188	(71251157)	C	AluJr	SINE/Alu	(8)	304	135	1432653
697	20.5	0.0	0.0	chr16	19907393	19907514	(70430831)	C	AluJb	SINE/Alu	(15)	297	176	1434657
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
370	35.0	4.3	1.3	chr16	22298460	22298618	(68039727)	C	MIR	SINE/MIR	(97)	165	2	1439787
313	30.4	11.1	1.8	chr16	22298633	22298803	(68039542)	+	MIR	SINE/MIR	1	189	(73)	1439788
358	25.7	2.2	11.7	chr16	22298824	22298977	(68039368)	C	MIR	SINE/MIR	(16)	246	108	1439789
46	7.6	0.0	0.0	chr16	23409065	23409121	(66929224)	+	(GT)n	Simple_repeat	1	57	(0)	1442203
254	31.0	12.0	5.5	chr16	24635683	24635938	(65702407)	C	L1MD	LINE/L1	(1843)	4303	4029	1445157
316	28.8	0.0	1.8	chr16	24636009	24636121	(65702224)	C	L2	LINE/L2	(1388)	2031	1921	1445158
281	30.2	0.0	2.3	chr16	24636139	24636267	(65702078)	C	L1MC	LINE/L1	(2182)	3964	3839	1445159
322	25.8	2.1	0.0	chr16	28537707	28537799	(61800546)	+	MIRb	SINE/MIR	51	145	(123)	1453784
13	29.6	0.0	0.0	chr16	28863277	28863294	(61475051)	+	(CCCACC)n	Simple_repeat	2	46	(0)	1454615
334	32.0	21.9	3.0	chr16	28925804	28926170	(61412175)	+	L2	LINE/L2	2357	2812	(607)	1454765
619	12.3	0.0	12.3	chr16	28945421	28945522	(61392823)	C	FLAM_A	SINE/Alu	(26)	116	19	1454816
348	28.7	0.0	3.6	chr16	28945423	28945534	(61392811)	+	SVA_A	Retroposon/SVA	219	326	(1061)	1454818
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
502	32.8	3.9	0.8	chr16	54652465	54652716	(35685629)	C	L4_B_Mam	LINE/RTE-X	(117)	4824	4565	1479912
19	7.2	0.0	0.0	chr16	57280559	57280587	(33057758)	+	(CAAAA)n	Simple_repeat	1	29	(0)	1484711
283	14.3	5.9	0.6	chr16	57280592	57280670	(33057675)	+	L4_C_Mam	LINE/RTE-X	4851	4926	(212)	1484712
257	26.9	11.9	0.9	chr16	57914300	57914404	(32423941)	+	L4_C_Mam	LINE/RTE-X	4834	4951	(187)	1486049
1176	30.6	4.1	2.0	chr16	66455464	66455688	(23882657)	C	L4_B_Mam	LINE/RTE-X	(192)	4749	4511	1499772
27	19.8	0.0	0.0	chr16	73057536	73057584	(17280761)	+	A-rich	Low_complexity	1	49	(0)	1512336
19	18.8	6.5	1.5	chr16	84145111	84145172	(6193173)	+	(CCG)n	Simple_repeat	1	66	(0)	1532219
723	31.4	6.4	3.8	chr16	85227795	85228329	(5110016)	C	L2b	LINE/L2	(0)	3375	2830	1534438
372	12.7	3.1	0.0	chr16	85990690	85990752	(4347593)	C	L4_C_Mam	LINE/RTE-X	(194)	4944	4880	1535812
288	23.4	0.0	0.0	chr16	87244048	87244111	(3094234)	+	L4_C_Mam	LINE/RTE-X	4894	4957	(181)	1538073
33	0.0	6.5	2.0	chr16	87244120	87244165	(3094180)	+	(TTTGT)n	Simple_repeat	1	49	(0)	1538074
2290	8.5	0.7	0.0	chr16	87244166	87244447	(3093898)	C	AluSq2	SINE/Alu	(29)	284	1	1538075
27	2.8	2.6	2.5	chr16	87765858	87765896	(2572449)	+	(GCCCTTCTT)n	Simple_repeat	1	40	(0)	1539014
2323	9.2	1.3	0.3	chr16	89182903	89183206	(1155139)	+	AluSq2	SINE/Alu	1	307	(6)	1540875
235	10.5	0.0	0.0	chr16	89183292	89183329	(1155016)	C	L4_C_Mam	LINE/RTE-X	(207)	4931	4894	1540876
320	23.0	2.3	6.5	chr17	3540795	3540896	(79716545)	+	L4_C_Mam	LINE/RTE-X	4865	4951	(187)	1551226
242	25.7	1.4	0.0	chr17	5281840	5281909	(77975532)	C	MIRc	SINE/MIR	(144)	124	54	1554824
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
389	25.9	4.8	1.4	chr17	7188571	7188711	(76068730)	+	L4_B_Mam	LINE/RTE-X	4595	4740	(201)	1558418
2268	11.4	0.0	0.0	chr17	7188830	7189127	(76068314)	+	AluSx1	SINE/Alu	1	298	(14)	1558419
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
691	0.0	0.0	0.0	chr17	8139452	8139525	(75117916)	C	tRNA-Thr-ACY	tRNA	(3)	74	1	1560172
678	0.0	0.0	0.0	chr17	8187593	8187666	(75069775)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1560266
2025	20.2	5.2	4.6	chr17	8991254	8991675	(74265766)	C	Charlie4a	DNA/hAT-Charlie	(79)	429	4	1561846
233	33.6	11.8	0.8	chr17	14297844	14297963	(68959478)	C	MIR3	SINE/MIR	(6)	202	68	1571197
17	7.0	0.0	5.9	chr17	15651820	15651853	(67605588)	+	(CTCAGG)n	Simple_repeat	1	34	(0)	1573445
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
654	26.9	5.1	4.8	chr17	17930708	17931039	(65326402)	C	L4_C_Mam	LINE/RTE-X	(102)	5036	4704	1577596
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
300	31.9	4.8	4.3	chr17	29145519	29145682	(54111759)	+	L2b	LINE/L2	3210	3374	(1)	1589971
1646	31.1	6.1	2.4	chr17	30034584	30035322	(53222119)	C	L4_A_Mam	LINE/RTE-X	(0)	4990	4223	1591809
18	25.5	1.6	3.1	chr17	30600796	30600859	(52656582)	+	(CCG)n	Simple_repeat	1	65	(0)	1592819
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
2244	7.4	0.0	0.7	chr17	39573071	39573354	(43684087)	+	AluSx1	SINE/Alu	1	282	(30)	1610385
29	0.0	0.0	0.0	chr17	39573355	39573382	(43684059)	+	(AAAAT)n	Simple_repeat	1	28	(0)	1610386
28	0.0	0.0	0.0	chr17	39573626	39573651	(43683790)	+	(CGC)n	Simple_repeat	1	26	(0)	1610387
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
17	11.2	0.0	8.7	chr17	40140786	40140838	(43116603)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1611419
241	29.2	5.3	3.6	chr17	41549207	41549316	(41708125)	+	MIR3	SINE/MIR	12	123	(85)	1613795
21	23.8	3.9	4.7	chr17	42423106	42423207	(40834234)	+	(GGAGCG)n	Simple_repeat	1	106	(0)	1615601
18	19.8	6.0	2.8	chr17	42536474	42536540	(40720901)	+	(GGC)n	Simple_repeat	1	71	(0)	1615845
430	28.7	0.8	1.6	chr17	42536759	42536882	(40720559)	+	MIRb	SINE/MIR	67	189	(79)	1615846
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
899	26.1	4.5	3.2	chr17	44317401	44317685	(38939756)	+	L4_A_Mam	LINE/RTE-X	4687	4975	(15)	1619682
1815	15.7	0.3	5.3	chr17	45129182	45129499	(38127942)	+	AluJo	SINE/Alu	11	312	(0)	1621406
218	32.4	0.9	9.0	chr17	45129500	45129554	(38127887)	+	MamRTE1	LINE/RTE-BovB	2458	2505	(1307)	1621404
428	29.5	8.5	4.3	chr17	45129555	45129706	(38127735)	+	MIRb	SINE/MIR	25	247	(21)	1621405
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
53	2.0	0.0	0.0	chr17	47706829	47706878	(35550563)	+	(AC)n	Simple_repeat	1	50	(0)	1626590
15	19.0	4.8	0.0	chr17	48541859	48541900	(34715541)	+	(TCCC)n	Simple_repeat	1	44	(0)	1628076
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
15	0.0	0.0	0.0	chr17	49515400	49515416	(33742025)	+	(AG)n	Simple_repeat	1	17	(0)	1630081
12	21.5	4.4	2.1	chr17	49515437	49515481	(33741960)	+	(GCAG)n	Simple_repeat	1	47	(0)	1630082
14	27.1	0.0	0.0	chr17	49515586	49515629	(33741812)	+	(CCTGAG)n	Simple_repeat	1	44	(0)	1630083
184	28.4	3.9	5.1	chr17	49515902	49515979	(33741462)	C	L2b	LINE/L2	(42)	3345	3269	1630084
607	27.1	6.0	1.4	chr17	50114884	50115108	(33142333)	+	MIRc	SINE/MIR	21	268	(0)	1631180
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
1723	14.0	8.0	0.0	chr17	56798863	56799174	(26458267)	C	MSTB1	LTR/ERVL-MaLR	(99)	333	1	1642005
4591	12.8	4.2	0.6	chr17	56799175	56799891	(26457550)	C	L1MC1	LINE/L1	(265)	6068	5325	1642003
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
2383	4.6	0.4	0.7	chr17	59209539	59209839	(24047602)	C	AluSq2	SINE/Alu	(0)	313	9	1646700
18	14.9	0.0	0.0	chr17	59209850	59209880	(24047561)	+	(T)n	Simple_repeat	1	31	(0)	1646701
1003	9.6	0.0	2.2	chr17	60401596	60401731	(22855710)	+	AluSz	SINE/Alu	1	133	(179)	1649161
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
13	19.1	0.0	0.0	chr17	68292140	68292169	(14965272)	+	(GCA)n	Simple_repeat	1	30	(0)	1663905
308	27.9	8.5	5.0	chr17	74212919	74213159	(9044282)	+	L2c	LINE/L2	3119	3387	(0)	1673699
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
2013	6.7	1.5	2.2	chr17	75905304	75905571	(7351870)	+	AluSc8	SINE/Alu	1	266	(45)	1676998
255	22.3	0.4	0.0	chr17	78113805	78113868	(5143573)	C	L4_B_Mam	LINE/RTE-X	(188)	4802	4688	1681223
382	20.4	10.7	0.8	chr17	78113873	78113996	(5143445)	+	MIR	SINE/MIR	33	177	(91)	1681224
1503	22.3	5.6	4.6	chr17	78114000	78114474	(5142967)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	23	1681225
14	12.7	0.0	0.0	chr17	78378668	78378693	(4878748)	+	(GGC)n	Simple_repeat	1	26	(0)	1681762
19	20.2	5.9	0.0	chr17	81860579	81860629	(1396812)	+	(GC)n	Simple_repeat	1	54	(0)	1686834
1696	28.6	5.3	1.0	chr18	392924	393411	(79979874)	+	L4_A_Mam	LINE/RTE-X	4276	4785	(205)	1689724
364	23.0	0.0	0.0	chr18	393421	393494	(79979791)	+	L4_A_Mam	LINE/RTE-X	4742	4815	(175)	1689725
229	32.8	2.6	0.9	chr18	393532	393645	(79979640)	+	L2c	LINE/L2	2972	3087	(300)	1689726
691	17.3	3.8	0.0	chr18	22342564	22342690	(58030595)	C	FLAM_C	SINE/Alu	(10)	133	2	1714406
816	31.1	14.9	4.8	chr18	23755650	23756297	(56616988)	C	L4_A_Mam	LINE/RTE-X	(193)	4797	4073	1716817
2097	9.6	0.0	1.1	chr18	24076010	24076279	(56297006)	C	AluSx1	SINE/Alu	(45)	267	1	1717310
20	9.1	11.3	2.9	chr18	55413658	55413719	(24959566)	+	GA-rich	Low_complexity	1	69	(0)	1762636
20	14.9	0.0	6.0	chr18	70288985	70289034	(10084251)	+	GA-rich	Low_complexity	1	50	(0)	1784348
1761	19.6	2.7	3.5	chr18	70931902	70932277	(9441008)	+	MER47B	DNA/TcMar-Tigger	1	373	(45)	1785271
41	0.0	0.0	0.0	chr18	77131086	77131120	(3242165)	+	(CA)n	Simple_repeat	1	35	(0)	1793101
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
11	17.5	1.9	9.1	chr19	1208019	1208072	(57409544)	+	(CTGCC)n	Simple_repeat	1	55	(0)	1798411
22	10.7	8.0	0.0	chr19	1407283	1407349	(57210267)	+	(CGCA)n	Simple_repeat	1	72	(0)	1798747
2432	10.0	0.0	0.0	chr19	1741309	1741618	(56875998)	C	AluSg	SINE/Alu	(0)	310	1	1799436
342	25.0	0.0	0.0	chr19	1741621	1741696	(56875920)	+	L4_A_Mam	LINE/RTE-X	4745	4820	(170)	1799437
1822	13.6	4.6	1.0	chr19	2237136	2237429	(56380187)	+	AluJr	SINE/Alu	1	305	(7)	1800384
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
364	36.9	7.3	4.3	chr19	5567073	5567471	(53050145)	+	HAL1	LINE/L1	880	1291	(1216)	1808365
15	24.9	1.4	5.7	chr19	5567588	5567656	(53049960)	+	(CGCCCC)n	Simple_repeat	1	70	(0)	1808366
12	11.1	0.0	8.6	chr19	5567631	5567665	(53049951)	+	(CCCCA)n	Simple_repeat	1	35	(0)	1808367
2116	13.6	1.3	0.0	chr19	5967739	5968046	(52649570)	+	AluSx1	SINE/Alu	1	312	(0)	1809183
50	18.0	6.4	2.4	chr19	6530484	6530640	(52086976)	+	(AGACAG)n	Simple_repeat	1	167	(0)	1810498
755	23.1	5.1	1.1	chr19	7510280	7510467	(51107149)	C	MER20	DNA/hAT-Charlie	(22)	197	2	1813110
232	21.8	10.3	1.1	chr19	7510482	7510569	(51107047)	+	L4_C_Mam	LINE/RTE-X	4832	4928	(210)	1813111
14	24.0	0.0	0.0	chr19	11380923	11380961	(47236655)	+	(AGGATG)n	Simple_repeat	1	39	(0)	1822181
189	30.8	20.4	0.6	chr19	12796429	12796585	(45821031)	C	MIRb	SINE/MIR	(56)	212	17	1825226
808	24.2	4.7	0.9	chr19	13589518	13589742	(45027874)	C	MER58B	DNA/hAT-Charlie	(0)	341	108	1827199
231	36.2	6.1	2.5	chr19	17333841	17334044	(41283572)	+	L2c	LINE/L2	2916	3127	(260)	1836047
659	26.1	10.0	1.0	chr19	17334054	17334254	(41283362)	C	MIR	SINE/MIR	(6)	256	36	1836048
18	20.8	7.6	0.0	chr19	17795057	17795122	(40822494)	+	G-rich	Low_complexity	1	71	(0)	1837292
238	32.4	13.6	0.0	chr19	18142194	18142295	(40475321)	+	L2c	LINE/L2	3007	3124	(263)	1838203
34	0.0	0.0	0.0	chr19	18221608	18221639	(40395977)	+	(GTTT)n	Simple_repeat	1	32	(0)	1838399
2252	8.4	0.0	0.3	chr19	18221640	18221925	(40395691)	C	AluSx	SINE/Alu	(27)	285	1	1838400
47	0.0	0.0	0.0	chr19	18491250	18491292	(40126324)	+	(T)n	Simple_repeat	1	43	(0)	1838952
1836	16.4	4.0	0.0	chr19	18491293	18491412	(40126204)	C	AluJb	SINE/Alu	(180)	132	1	1838951
1593	17.2	9.5	15.3	chr19	18491413	18491632	(40125984)	+	MLT2D	LTR/ERVL	126	357	(57)	1838950
323	25.9	13.8	0.9	chr19	29714866	29714978	(28902638)	+	MIR	SINE/MIR	36	165	(97)	1850682
374	31.6	4.0	9.9	chr19	30129503	30129567	(28488049)	C	L4_C_Mam	LINE/RTE-X	(206)	4932	4874	1851435
2632	0.3	0.0	0.3	chr19	30129568	30129851	(28487765)	+	AluYa5	SINE/Alu	29	311	(0)	1851436
12	20.4	2.4	2.4	chr19	30375459	30375508	(28242108)	+	(GCCCACA)n	Simple_repeat	1	50	(0)	1851768
3207	19.7	11.1	2.2	chr19	32373384	32374169	(26243447)	C	Tigger6a	DNA/TcMar-Tigger	(211)	872	8	1854681
493	31.1	7.7	3.5	chr19	33032759	33033071	(25584545)	+	L4_A_Mam	LINE/RTE-X	4662	4988	(2)	1856001
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
12	23.8	2.2	2.1	chr19	34134452	34134497	(24483119)	+	G-rich	Low_complexity	1	47	(0)	1857971
358	23.9	9.5	3.1	chr19	34429060	34429201	(24188415)	C	MIR	SINE/MIR	(78)	184	43	1858628
12	14.6	0.0	5.9	chr19	35545823	35545856	(23071760)	+	G-rich	Low_complexity	1	34	(0)	1860636
428	26.6	6.0	3.7	chr19	35646806	35646969	(22970647)	C	L2a	LINE/L2	(0)	3426	3259	1860836
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
864	22.2	9.8	1.5	chr19	35999156	35999425	(22618191)	+	LTR16E1	LTR/ERVL	209	503	(35)	1861652
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
15	16.8	0.0	0.0	chr19	36528950	36528976	(22088640)	+	(GT)n	Simple_repeat	1	27	(0)	1862728
13	14.0	0.0	5.7	chr19	36605285	36605319	(22012297)	+	(GCGCAG)n	Simple_repeat	1	35	(0)	1862876
41	2.6	0.0	0.0	chr19	36838107	36838146	(21779470)	+	(CA)n	Simple_repeat	1	40	(0)	1863352
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
423	33.8	3.1	1.4	chr19	38263679	38263900	(20353716)	+	L2b	LINE/L2	3069	3294	(81)	1866263
260	27.1	5.5	3.4	chr19	38263911	38263998	(20353618)	+	L2b	LINE/L2	3128	3217	(158)	1866264
195	21.9	15.1	0.0	chr19	38264104	38264176	(20353440)	+	L2b	LINE/L2	3276	3361	(14)	1866264
18	25.9	4.2	2.7	chr19	38647566	38647637	(19969979)	+	(GC)n	Simple_repeat	1	75	(0)	1867185
18	8.5	0.0	0.0	chr19	38667333	38667357	(19950259)	+	(TG)n	Simple_repeat	1	25	(0)	1867209
400	8.5	1.7	0.0	chr19	38962152	38962210	(19655406)	+	AluSq	SINE/Alu	244	303	(10)	1867850
2003	21.7	13.8	4.5	chr19	38962221	38962706	(19654910)	+	LTR41	LTR/ERVL	64	622	(146)	1867851
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
13	29.6	0.0	0.0	chr19	40425604	40425648	(18191968)	+	(CGG)n	Simple_repeat	1	45	(0)	1871022
552	18.9	15.4	0.0	chr19	40465100	40465231	(18152385)	+	MIR	SINE/MIR	12	167	(95)	1871150
872	27.7	8.3	4.8	chr19	40523132	40523330	(18094286)	C	L2a	LINE/L2	(215)	3211	3011	1871310
88	6.9	0.0	0.0	chr19	40569937	40570042	(18047574)	+	(CA)n	Simple_repeat	1	106	(0)	1871442
2211	8.7	2.0	0.0	chr19	40662554	40662841	(17954775)	C	AluSx1	SINE/Alu	(17)	295	2	1871650
30	0.0	0.0	0.0	chr19	40715846	40715871	(17901745)	+	(TG)n	Simple_repeat	1	26	(0)	1871775
397	32.2	6.5	7.8	chr19	40751530	40751903	(17865713)	+	L2b	LINE/L2	2957	3325	(50)	1871866
490	24.7	4.1	6.9	chr19	40751935	40752051	(17865565)	C	MIR	SINE/MIR	(29)	233	124	1871867
280	32.5	0.0	5.5	chr19	41308838	41308964	(17308652)	+	L2b	LINE/L2	2847	2966	(453)	1873117
13	18.9	2.8	0.0	chr19	43766656	43766691	(14850925)	+	(GCCCCA)n	Simple_repeat	1	37	(0)	1877624
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
827	25.3	3.1	10.1	chr19	45424217	45424524	(13193092)	C	L2b	LINE/L2	(0)	3375	3090	1881264
1191	31.0	4.7	3.8	chr19	45613796	45614362	(13003254)	+	L2b	LINE/L2	2789	3375	(0)	1881783
195	25.4	4.5	0.0	chr19	45614493	45614555	(13003061)	+	L3	LINE/CR1	3948	4013	(86)	1881784
423	27.9	13.9	1.4	chr19	45646425	45646562	(12971054)	+	MIR	SINE/MIR	10	167	(95)	1881882
1857	15.2	3.3	0.0	chr19	47289273	47289569	(11328047)	C	AluSz6	SINE/Alu	(4)	308	2	1885763
2593	15.0	0.2	2.7	chr19	47289570	47289947	(11327669)	C	MER66B	LTR/ERV1	(86)	400	27	1885762
821	14.5	0.0	8.3	chr19	49452002	49452146	(9165470)	+	FLAM_C	SINE/Alu	1	133	(10)	1891121
2412	8.5	0.0	0.0	chr19	49641311	49641616	(8976000)	C	AluSq2	SINE/Alu	(7)	306	1	1891596
594	18.5	4.1	0.1	chr19	49641619	49641750	(8975866)	C	FLAM_C	SINE/Alu	(82)	220	5	1891597
307	19.2	0.0	0.0	chr19	50254869	50254920	(8362696)	C	L4_C_Mam	LINE/RTE-X	(194)	4944	4893	1893110
268	13.9	0.0	0.0	chr19	50824847	50824889	(7792727)	+	L4_C_Mam	LINE/RTE-X	4892	4934	(204)	1894405
2337	9.3	0.3	1.3	chr19	50824890	50825199	(7792417)	C	AluSz	SINE/Alu	(5)	307	1	1894406
1263	16.6	0.0	2.2	chr19	52189248	52189470	(6428146)	+	AluJb	SINE/Alu	95	312	(0)	1896964
1779	11.8	10.6	0.0	chr19	55216200	55216462	(3401154)	C	AluSx	SINE/Alu	(15)	297	4	1903254
333	27.8	10.0	0.0	chr19	55643241	55643348	(2974268)	+	MIRb	SINE/MIR	34	153	(115)	1904223
3638	6.1	5.0	3.9	chr19	58277944	58278458	(339158)	+	MER41C	LTR/ERV1	1	521	(0)	1909251
235	24.5	15.3	0.0	chr2	10072646	10072739	(232120790)	C	L1MC5a	LINE/L1	(13)	2764	2654	1924117
503	30.1	1.2	4.7	chr2	20602187	20602357	(221591172)	+	L4_A_Mam	LINE/RTE-X	4614	4778	(212)	1940627
191	27.6	8.4	4.4	chr2	24490668	24490826	(217702703)	C	MIR3	SINE/MIR	(42)	166	1	1946256
19	22.1	0.0	0.0	chr2	24490925	24490971	(217702558)	+	G-rich	Low_complexity	1	47	(0)	1946257
33	5.6	0.0	0.0	chr2	45651060	45651096	(196542433)	+	(CA)n	Simple_repeat	1	37	(0)	1981029
22	16.0	8.8	2.3	chr2	45651173	45651252	(196542277)	+	(GGCGAGC)n	Simple_repeat	1	87	(0)	1981030
188	20.5	0.0	0.0	chr2	55051353	55051391	(187142138)	+	UCON80_AMi	Unknown	72	110	(112)	1995183
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
3405	29.4	14.3	6.5	chr2	58514560	58516520	(183677009)	+	L2a	LINE/L2	905	3043	(376)	1999901
309	28.3	3.6	1.9	chr2	58516576	58516683	(183676846)	+	L2a	LINE/L2	3152	3261	(165)	1999901
2193	9.5	0.7	1.0	chr2	70321320	70321449	(171872080)	C	AluSx1	SINE/Alu	(177)	135	5	2018883
1020	15.8	0.0	1.8	chr2	70321695	70321859	(171871670)	+	AluJo	SINE/Alu	137	298	(14)	2018885
28	0.0	3.3	0.0	chr2	100416685	100416714	(141776815)	+	(ACA)n	Simple_repeat	1	31	(0)	2057843
2369	23.1	4.3	6.4	chr2	119857653	119857837	(122335692)	C	L1MDa	LINE/L1	(4619)	2014	1846	2086064
2391	16.6	4.0	0.5	chr2	119857838	119858248	(122335281)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2086073
344	25.0	14.1	5.4	chr2	120975263	120975520	(121218009)	C	L4_A_Mam	LINE/RTE-X	(1)	4989	4706	2087832
289	32.1	4.4	0.9	chr2	127062628	127062754	(115130775)	+	L4_A_Mam	LINE/RTE-X	4687	4836	(154)	2096827
1281	21.9	7.0	7.0	chr2	152200586	152201041	(89992488)	+	LTR16A1	LTR/ERVL	1	456	(0)	2132031
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
51	25.7	3.3	3.6	chr2	170770826	170771037	(71422492)	+	(GCCCCC)n	Simple_repeat	1	219	(0)	2157212
1572	14.3	0.0	1.8	chr2	176485310	176485533	(65707996)	C	AluJb	SINE/Alu	(9)	303	84	2166213
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
13	13.2	6.7	4.2	chr2	196593438	196593482	(45600047)	+	(CCGCGGTG)n	Simple_repeat	1	48	(0)	2192634
24	12.6	0.0	0.0	chr2	196987961	196987996	(45205533)	+	(GA)n	Simple_repeat	1	36	(0)	2193213
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
501	35.6	8.5	0.0	chr2	201233589	201233824	(40959705)	C	MIRb	SINE/MIR	(3)	265	8	2199796
13	16.2	4.4	4.3	chr2	219160852	219160896	(23032633)	+	G-rich	Low_complexity	1	47	(0)	2227435
184	25.0	13.6	8.4	chr2	219160993	219161158	(23032371)	+	MIR3	SINE/MIR	10	185	(23)	2227436
12	15.5	3.5	0.0	chr2	222860880	222860908	(19332621)	+	(CGCGC)n	Simple_repeat	1	30	(0)	2233362
13	22.9	2.1	4.2	chr2	237291388	237291434	(4902095)	+	(TTCTC)n	Simple_repeat	1	48	(0)	2256186
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
15	13.9	0.0	0.0	chr20	2873523	2873546	(61570621)	+	(CG)n	Simple_repeat	1	24	(0)	2267731
17	27.7	2.4	4.6	chr20	2873554	2873638	(61570529)	+	(GCC)n	Simple_repeat	1	87	(0)	2267732
2301	6.4	0.3	7.4	chr20	3160066	3160391	(61283776)	+	AluSx	SINE/Alu	3	305	(7)	2268330
476	26.1	5.3	3.1	chr20	17717460	17717773	(46726394)	C	L4_B_Mam	LINE/RTE-X	(107)	5031	4587	2291335
1570	28.5	8.0	6.8	chr20	18584840	18585554	(45858613)	C	MER21C	LTR/ERVL	(89)	849	126	2292931
814	24.2	10.5	6.5	chr20	20603415	20603853	(43840314)	+	MLT1H	LTR/ERVL-MaLR	37	548	(1)	2295801
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
265	27.8	6.9	2.4	chr20	32022087	32022252	(32421915)	+	L4_C_Mam	LINE/RTE-X	4793	4966	(172)	2307439
210	30.4	3.1	0.0	chr20	32022302	32022415	(32421752)	+	MIR3	SINE/MIR	76	193	(69)	2307440
2118	12.1	0.0	0.4	chr20	32066304	32066612	(32377555)	C	AluSz	SINE/Alu	(0)	312	1	2307567
522	28.8	4.6	6.2	chr20	32066613	32066800	(32377367)	+	L4_C_Mam	LINE/RTE-X	4763	4955	(183)	2307566
227	13.9	0.0	0.0	chr20	32066896	32066931	(32377236)	+	L4_C_Mam	LINE/RTE-X	5084	5119	(19)	2307568
46	2.2	0.0	0.0	chr20	32277699	32277744	(32166423)	+	(CGC)n	Simple_repeat	1	46	(0)	2308087
401	27.2	7.6	1.6	chr20	32574281	32574417	(31869750)	C	MIR	SINE/MIR	(49)	213	77	2308712
238	21.2	5.7	0.0	chr20	32574413	32574478	(31869689)	+	MIRb	SINE/MIR	120	189	(79)	2308713
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
2151	9.9	0.7	1.3	chr20	34515892	34516194	(29927973)	C	AluJo	SINE/Alu	(11)	301	1	2313239
1408	23.9	5.9	6.5	chr20	35561115	35561593	(28882574)	+	MLT1K	LTR/ERVL-MaLR	6	481	(114)	2315554
2061	15.3	0.0	0.3	chr20	36811347	36811653	(27632514)	+	AluSz6	SINE/Alu	1	306	(6)	2318502
298	18.7	1.3	1.3	chr20	36811660	36811735	(27632432)	+	L4_C_Mam	LINE/RTE-X	4851	4926	(212)	2318503
487	26.7	10.8	7.9	chr20	38318036	38318377	(26125790)	C	L4_B_Mam	LINE/RTE-X	(2)	4939	4587	2321898
292	27.1	12.7	1.5	chr20	40670159	40670294	(23773873)	C	MIR3	SINE/MIR	(116)	152	1	2326219
510	32.4	1.2	0.0	chr20	40670317	40670486	(23773681)	+	L4_A_Mam	LINE/RTE-X	4631	4802	(188)	2326220
16	9.9	0.0	7.7	chr20	40670541	40670579	(23773588)	+	(TTGTTT)n	Simple_repeat	1	39	(0)	2326221
780	31.7	2.3	1.9	chr20	40986366	40986674	(23457493)	+	L4_A_Mam	LINE/RTE-X	4615	4924	(66)	2326828
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
656	28.6	8.1	2.5	chr20	41698019	41698348	(22745819)	C	L4_A_Mam	LINE/RTE-X	(0)	4941	4585	2327934
449	27.0	0.9	0.0	chr20	41698369	41698479	(22745688)	C	L4_A_Mam	LINE/RTE-X	(416)	4574	4463	2327934
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
700	28.1	3.5	2.0	chr20	46890524	46890774	(17553393)	+	L4_A_Mam	LINE/RTE-X	4733	4987	(3)	2338708
645	34.1	7.8	3.1	chr20	47734527	47734916	(16709251)	C	L4_C_Mam	LINE/RTE-X	(185)	4953	4544	2340740
17	18.2	0.0	0.0	chr20	49982913	49982943	(14461224)	+	(C)n	Simple_repeat	1	31	(0)	2345774
497	22.0	10.2	14.3	chr20	50636265	50636481	(13807686)	+	MamRep38	DNA/hAT	1	207	(88)	2347340
805	25.1	10.6	3.4	chr20	53021929	53022279	(11421888)	C	L4_C_Mam	LINE/RTE-X	(0)	5138	4760	2352641
384	25.7	4.6	2.8	chr20	54071133	54071348	(10372819)	C	L4_B_Mam	LINE/RTE-X	(36)	4954	4683	2354976
34	40.4	0.0	0.0	chr20	57092358	57092524	(7351643)	+	(CA)n	Simple_repeat	1	167	(0)	2360524
12	25.4	1.1	2.2	chr20	62972672	62972736	(1471431)	+	G-rich	Low_complexity	1	64	(0)	2369143
759	19.1	4.4	0.0	chr20	63628567	63628697	(815470)	+	FLAM_C	SINE/Alu	1	137	(6)	2369787
346	26.2	8.7	3.1	chr20	63864155	63864284	(579883)	+	MIR	SINE/MIR	9	146	(116)	2370147
638	19.7	7.5	5.9	chr21	36321223	36321459	(10388524)	C	L1ME3Cz	LINE/L1	(752)	245	5	2409608
529	29.6	2.3	8.0	chr21	36541329	36541691	(10168292)	C	L4_C_Mam	LINE/RTE-X	(96)	5042	4701	2410074
495	21.6	0.0	0.0	chr21	36714336	36714432	(9995551)	C	L4_C_Mam	LINE/RTE-X	(181)	4957	4861	2410365
218	33.8	10.5	3.5	chr21	36714433	36714573	(9995410)	+	MIRc	SINE/MIR	97	248	(20)	2410366
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
492	25.5	12.7	0.5	chr21	39388339	39388539	(7321444)	C	L1MC4	LINE/L1	(283)	7759	7531	2414501
2526	9.4	6.5	3.8	chr21	41783544	41783964	(4926019)	+	LTR3B	LTR/ERVK	1	433	(4)	2417996
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
13	4.1	8.0	0.0	chr21	46325382	46325406	(384577)	+	(GGAG)n	Simple_repeat	1	27	(0)	2423814
47	27.5	3.6	3.9	chr22	19431483	19431707	(31386761)	+	(GCC)n	Simple_repeat	1	233	(0)	2431996
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
13	18.4	1.2	4.9	chr22	20117489	20117554	(30700914)	+	G-rich	Low_complexity	1	63	(0)	2432925
2410	8.5	0.0	1.9	chr22	20633737	20634052	(30184416)	C	AluY	SINE/Alu	(0)	311	2	2433659
252	29.1	5.6	0.8	chr22	20970056	20970173	(29848295)	+	L4_C_Mam	LINE/RTE-X	4810	4933	(205)	2434345
296	31.3	8.1	6.4	chr22	20970223	20970278	(29848190)	C	MIRb	SINE/MIR	(59)	209	157	2434346
1889	15.8	1.9	2.9	chr22	20970279	20970446	(29848022)	C	AluJr	SINE/Alu	(4)	308	137	2434347
298	29.1	13.6	0.0	chr22	22923599	22923763	(27894705)	C	L4_A_Mam	LINE/RTE-X	(116)	4874	4684	2437537
29	3.2	0.0	0.0	chr22	23572402	23572433	(27246035)	+	(AAC)n	Simple_repeat	1	32	(0)	2438519
1012	12.2	0.7	0.7	chr22	23572434	23572461	(27246007)	+	AluSx3	SINE/Alu	284	311	(0)	2438518
1489	15.3	0.0	0.0	chr22	23637609	23637824	(27180644)	+	AluSx	SINE/Alu	84	299	(13)	2438646
2718	5.1	0.3	0.0	chr22	24301767	24302060	(26516408)	+	AluY	SINE/Alu	2	296	(15)	2439828
529	34.8	4.5	4.2	chr22	25771120	25771449	(25047019)	+	L4_A_Mam	LINE/RTE-X	4530	4860	(130)	2442817
522	29.8	5.9	7.0	chr22	25943281	25943706	(24874762)	+	L2a	LINE/L2	2655	3102	(324)	2443211
14	16.6	7.3	0.0	chr22	27372470	27372510	(23445958)	+	(CAG)n	Simple_repeat	1	44	(0)	2446540
464	22.5	9.6	2.1	chr22	29741460	29741604	(21076864)	+	L4_A_Mam	LINE/RTE-X	4728	4884	(106)	2451206
1998	14.8	0.0	2.8	chr22	29741637	29741953	(21076515)	C	AluJr	SINE/Alu	(4)	308	1	2451207
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
249	13.9	0.0	0.0	chr22	30882881	30882923	(19935545)	+	L4_A_Mam	LINE/RTE-X	4738	4780	(210)	2453566
16	6.9	6.5	0.0	chr22	31107917	31107947	(19710521)	+	(AAGA)n	Simple_repeat	1	33	(0)	2454028
289	20.1	17.9	5.3	chr22	32538154	32538342	(18280126)	+	L4_A_Mam	LINE/RTE-X	4734	4951	(39)	2457157
185	29.2	2.7	4.0	chr22	36659706	36659780	(14158688)	+	MIRc	SINE/MIR	11	84	(184)	2465579
14	18.8	0.0	0.0	chr22	37271186	37271216	(13547252)	+	(CTTC)n	Simple_repeat	1	31	(0)	2466858
766	26.1	13.2	1.5	chr22	37271250	37271583	(13546885)	C	L4_B_Mam	LINE/RTE-X	(97)	4844	4466	2466859
2235	6.2	0.4	2.4	chr22	37848993	37849280	(12969188)	C	AluSp	SINE/Alu	(20)	293	12	2468218
29	0.0	0.0	0.0	chr22	38291339	38291363	(12527105)	+	(CA)n	Simple_repeat	1	25	(0)	2469195
17	25.9	1.4	4.2	chr22	38317669	38317738	(12500730)	+	G-rich	Low_complexity	1	71	(0)	2469245
2253	11.2	0.7	0.0	chr22	38420262	38420557	(12397911)	C	AluSx1	SINE/Alu	(14)	298	1	2469447
300	28.3	1.6	6.2	chr22	38420558	38420626	(12397842)	C	MIR3	SINE/MIR	(60)	148	82	2469446
327	19.3	2.4	0.0	chr22	38420654	38420736	(12397732)	+	L4_C_Mam	LINE/RTE-X	4853	4937	(201)	2469448
238	18.0	0.0	5.7	chr22	38420733	38420785	(12397683)	+	L4_C_Mam	LINE/RTE-X	5066	5115	(23)	2469448
829	27.8	3.0	0.9	chr22	38420795	38421023	(12397445)	C	MIRb	SINE/MIR	(15)	253	20	2469449
262	31.9	8.5	7.1	chr22	39682841	39683107	(11135361)	C	L4_C_Mam	LINE/RTE-X	(140)	4998	4728	2472157
677	32.0	4.7	1.9	chr22	42620740	42621051	(8197417)	+	L4_A_Mam	LINE/RTE-X	4668	4988	(2)	2478509
257	30.8	2.4	2.4	chr22	42636882	42637004	(8181464)	+	L2b	LINE/L2	2994	3116	(259)	2478540
279	27.5	0.0	0.0	chr22	42637120	42637188	(8181280)	+	L4_B_Mam	LINE/RTE-X	4671	4739	(202)	2478541
12	4.9	0.0	4.3	chr22	42637214	42637236	(8181232)	+	(TCCT)n	Simple_repeat	1	23	(0)	2478542
341	35.3	1.0	0.5	chr22	43229682	43229883	(7588585)	C	L4_B_Mam	LINE/RTE-X	(140)	4801	4599	2479854
250	30.2	11.4	4.3	chr22	45072387	45072597	(5745871)	+	L2c	LINE/L2	2455	2682	(737)	2483177
241	26.0	2.5	2.5	chr22	46000012	46000090	(4818378)	C	L4_A_Mam	LINE/RTE-X	(187)	4803	4725	2484856
34	36.0	0.0	4.0	chr22	49970634	49970807	(847661)	+	(GT)n	Simple_repeat	1	174	(0)	2490008
195	25.0	5.9	0.0	chr3	4828982	4829029	(193466530)	+	MIRc	SINE/MIR	25	75	(193)	2499641
293	31.5	12.2	2.7	chr3	4829063	4829284	(193466275)	C	MIRc	SINE/MIR	(16)	252	7	2499642
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
209	36.7	2.4	0.0	chr3	9363318	9363437	(188932122)	+	MIR3	SINE/MIR	34	156	(52)	2507069
195	34.5	8.2	2.2	chr3	9363444	9363535	(188932024)	+	L2b	LINE/L2	3256	3353	(22)	2507070
264	19.3	5.0	0.0	chr3	9363541	9363597	(188931962)	C	Charlie24	DNA/hAT-Charlie	(9)	2441	2382	2507071
315	31.9	6.9	4.6	chr3	10418050	10418289	(187877270)	+	L4_A_Mam	LINE/RTE-X	4709	4954	(36)	2509370
483	18.6	5.5	0.0	chr3	10562701	10562842	(187732717)	+	L1ME3G	LINE/L1	5660	5793	(331)	2509663
344	23.1	0.0	0.0	chr3	10562890	10562954	(187732605)	+	L4_B_Mam	LINE/RTE-X	4681	4745	(196)	2509664
511	27.4	18.1	3.0	chr3	15407757	15408129	(182887430)	+	L4_A_Mam	LINE/RTE-X	4523	4964	(26)	2518768
18	22.6	8.3	1.1	chr3	23806890	23806973	(174488586)	+	(CCTGC)n	Simple_repeat	1	91	(0)	2530814
644	25.2	6.3	5.2	chr3	45938792	45938894	(152356665)	+	MER112	DNA/hAT-Charlie	155	260	(1)	2564684
296	26.5	11.3	2.5	chr3	46677762	46677962	(151617597)	+	L4_C_Mam	LINE/RTE-X	4817	5037	(101)	2565779
12	16.3	2.8	2.7	chr3	48429210	48429245	(149866314)	+	(GAGCCCC)n	Simple_repeat	1	37	(0)	2569299
277	31.8	0.0	0.0	chr3	50616271	50616333	(147679226)	+	MIR3	SINE/MIR	85	147	(61)	2573287
273	32.5	9.6	2.9	chr3	50632081	50632457	(147663102)	+	L4_C_Mam	LINE/RTE-X	4654	5058	(80)	2573313
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
1466	14.6	4.1	2.5	chr3	52825320	52825558	(145470001)	+	AluJb	SINE/Alu	1	243	(69)	2576534
17	0.0	4.0	0.0	chr3	77039266	77039290	(121256269)	+	(TTTCC)n	Simple_repeat	1	26	(0)	2616365
276	31.6	14.0	1.4	chr3	123212668	123212959	(75082600)	C	L4_A_Mam	LINE/RTE-X	(0)	4990	4656	2673354
545	27.1	2.2	4.3	chr3	132180364	132180548	(66115011)	C	MER91B	DNA/hAT-Tip100	(9)	181	1	2688040
238	25.9	15.6	1.2	chr3	133943455	133943536	(64352023)	+	L4_C_Mam	LINE/RTE-X	4837	4932	(206)	2690707
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
17	27.5	5.6	3.2	chr3	168294932	168295020	(30000539)	+	(CT)n	Simple_repeat	1	94	(0)	2739864
1059	15.9	2.7	0.0	chr3	168295146	168295327	(30000232)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	2739865
201	30.5	9.4	8.1	chr3	169812781	169813001	(28482558)	C	L2b	LINE/L2	(45)	3330	3107	2741848
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
514	16.5	0.0	4.2	chr3	179247424	179247518	(19048041)	+	FLAM_C	SINE/Alu	46	128	(5)	2755830
845	30.0	0.4	0.0	chr3	179247540	179247782	(19047777)	C	L4_A_Mam	LINE/RTE-X	(158)	4832	4589	2755831
665	23.6	2.0	9.4	chr3	185776837	185777102	(12518457)	C	L4_B_Mam	LINE/RTE-X	(1)	4940	4695	2767066
1005	12.6	0.0	0.0	chr3	185777126	185777268	(12518291)	C	MER6	DNA/TcMar-Tigger	(0)	865	723	2767067
305	14.1	7.8	0.0	chr3	192887606	192887676	(5407883)	+	L1MC5	LINE/L1	9225	9301	(3)	2778620
754	18.9	4.2	0.0	chr3	192887813	192887971	(5407588)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	2778623
13	28.1	3.1	3.0	chr3	193960758	193960821	(4334738)	+	GA-rich	Low_complexity	1	66	(0)	2780273
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
13	30.1	0.0	3.3	chr3	197750593	197750652	(544907)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2787461
402	24.7	7.3	4.3	chr4	124972	125157	(190089398)	C	MER57E3	LTR/ERV1	(0)	487	296	2788669
244	10.9	2.1	0.0	chr4	1783784	1783829	(188430726)	C	L4_A_Mam	LINE/RTE-X	(204)	4786	4747	2790596
290	27.8	2.7	0.0	chr4	1788654	1788761	(188425794)	C	MER94B	DNA/hAT-Blackjack	(8)	125	15	2790600
264	18.9	0.0	0.0	chr4	1788792	1788844	(188425711)	+	L4_B_Mam	LINE/RTE-X	4695	4747	(194)	2790601
325	29.9	2.3	0.8	chr4	7323255	7323382	(182891173)	C	L4_A_Mam	LINE/RTE-X	(212)	4778	4649	2799986
416	28.9	12.4	1.0	chr4	8217520	8217725	(181996830)	C	L4_A_Mam	LINE/RTE-X	(125)	4865	4633	2801426
26	6.3	0.0	0.0	chr4	40055708	40055741	(150158814)	+	(ACC)n	Simple_repeat	1	34	(0)	2851168
419	26.4	4.9	11.7	chr4	75514833	75515141	(114699414)	C	L2c	LINE/L2	(5)	3382	3096	2897554
201	13.6	4.3	4.3	chr4	112286295	112286340	(77928215)	C	MIRc	SINE/MIR	(118)	150	105	2948980
770	7.9	1.0	0.0	chr4	112286359	112286459	(77928096)	C	AluSx3	SINE/Alu	(4)	307	206	2948981
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
26	17.0	0.0	0.0	chr4	140154463	140154508	(50060047)	+	(TG)n	Simple_repeat	1	46	(0)	2985807
1275	18.0	10.6	3.7	chr4	140266274	140266596	(49947959)	C	MLT1A0	LTR/ERVL-MaLR	(6)	359	12	2985991
13	20.2	2.0	5.8	chr4	168832071	168832121	(21382434)	+	(CCCGCT)n	Simple_repeat	1	52	(0)	3025411
18	8.5	0.0	0.0	chr4	170027221	170027245	(20187310)	+	(T)n	Simple_repeat	1	25	(0)	3027260
473	25.6	10.2	2.9	chr5	1792902	1793074	(179745185)	C	MER58A	DNA/hAT-Charlie	(3)	221	35	3056657
40	25.7	2.9	7.5	chr5	10307850	10308095	(171230164)	+	G-rich	Low_complexity	1	253	(0)	3066658
887	16.5	3.0	4.9	chr5	32193444	32193647	(149344612)	C	L1MB8	LINE/L1	(41)	6137	5938	3096372
260	20.4	0.0	0.0	chr5	39080767	39080815	(142457444)	C	MERX	DNA/TcMar-Tigger	(397)	359	311	3107051
226	35.1	2.9	0.0	chr5	39080860	39081027	(142457232)	+	L1MEd	LINE/L1	654	826	(6260)	3107052
12	23.3	0.0	0.0	chr5	40835471	40835505	(140702754)	+	(TTGCTG)n	Simple_repeat	1	35	(0)	3109515
17	12.7	4.3	4.1	chr5	43019447	43019493	(138518766)	+	(TTTAT)n	Simple_repeat	1	49	(0)	3112415
274	26.7	4.7	1.4	chr5	55232733	55232922	(126305337)	C	MIRb	SINE/MIR	(38)	230	33	3122912
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
13	15.4	5.6	0.0	chr5	68215681	68215716	(113322543)	+	G-rich	Low_complexity	1	38	(0)	3141939
225	30.1	8.2	1.6	chr5	71694268	71694392	(109843867)	C	L1MEc	LINE/L1	(6183)	217	84	3147923
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
1511	24.7	14.8	4.7	chr5	77134928	77135356	(104402903)	+	LTR16B1	LTR/ERVL	1	480	(0)	3156247
426	29.7	7.2	1.7	chr5	79361120	79361355	(102176904)	C	L4_C_Mam	LINE/RTE-X	(183)	4955	4706	3159617
248	31.3	10.4	3.0	chr5	90410217	90410384	(91127875)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	3174712
31	3.3	0.0	0.0	chr5	93582772	93582802	(87955457)	+	(GT)n	Simple_repeat	1	31	(0)	3178831
1037	30.9	7.0	1.7	chr5	102780292	102780709	(78757550)	C	MER20B	DNA/hAT-Charlie	(341)	442	1	3190556
1156	15.9	3.3	2.4	chr5	102780720	102780741	(78757518)	C	MER20	DNA/hAT-Charlie	(3)	216	196	3190562
111	1.6	1.5	3.0	chr5	102780742	102780872	(78757387)	+	(TTTC)n	Simple_repeat	1	133	(0)	3190563
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
18	19.8	2.2	0.0	chr5	134526091	134526136	(47012123)	+	(CTCT)n	Simple_repeat	1	47	(0)	3232769
12	30.2	2.8	2.7	chr5	134905078	134905149	(46633110)	+	(GGCCGGC)n	Simple_repeat	1	74	(0)	3233621
13	10.8	6.7	0.0	chr5	136132815	136132844	(45405415)	+	(CCTC)n	Simple_repeat	1	32	(0)	3235278
15	0.0	5.3	0.0	chr5	139294474	139294492	(42243767)	+	(CG)n	Simple_repeat	1	20	(0)	3240506
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
2619	4.5	0.0	1.3	chr5	140719151	140719463	(40818796)	+	AluY	SINE/Alu	1	309	(2)	3243136
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
12	13.9	0.0	0.0	chr5	143403958	143403981	(38134278)	+	(GGC)n	Simple_repeat	1	24	(0)	3247590
19	19.2	0.0	0.0	chr5	145937170	145937205	(35601054)	+	A-rich	Low_complexity	1	36	(0)	3251555
13	27.4	0.0	3.6	chr5	150485874	150485929	(31052330)	+	(CCCCGCC)n	Simple_repeat	1	56	(0)	3260072
29	18.4	3.2	5.1	chr5	150486179	150486273	(31051986)	+	G-rich	Low_complexity	1	98	(0)	3260073
24	27.4	3.6	2.6	chr5	150486521	150486630	(31051629)	+	(GCGG)n	Simple_repeat	1	114	(0)	3260074
11	18.1	2.4	4.8	chr5	154446098	154446138	(27092121)	+	G-rich	Low_complexity	1	42	(0)	3267171
14	8.3	0.0	3.6	chr5	154576898	154576925	(26961334)	+	(CCTCT)n	Simple_repeat	1	28	(0)	3267493
305	24.9	8.0	9.7	chr5	154576933	154577086	(26961173)	+	MIR3	SINE/MIR	27	186	(22)	3267494
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
30	20.1	0.0	0.0	chr5	159099518	159099575	(22438684)	+	A-rich	Low_complexity	1	58	(0)	3275546
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
554	32.6	2.1	2.5	chr5	170068121	170068400	(11469859)	C	L4_B_Mam	LINE/RTE-X	(121)	4820	4542	3292922
266	33.0	12.9	0.0	chr5	172111710	172111824	(9426435)	+	L2a	LINE/L2	3289	3420	(6)	3296698
963	32.8	3.4	1.1	chr5	173398546	173399029	(8139230)	C	L4_A_Mam	LINE/RTE-X	(80)	4910	4354	3299533
2372	8.3	0.0	0.0	chr5	173838575	173838864	(7699395)	+	AluSg7	SINE/Alu	5	294	(15)	3300403
359	29.8	4.1	1.6	chr5	173838952	173839142	(7699117)	+	L4_A_Mam	LINE/RTE-X	4741	4936	(54)	3300404
649	26.2	11.3	1.4	chr5	176578865	176579143	(4959116)	C	L4_A_Mam	LINE/RTE-X	(0)	4990	4681	3305586
3493	21.6	8.2	8.7	chr5	177224010	177225144	(4313115)	C	L1M4	LINE/L1	(1333)	4813	3679	3306978
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
24	20.6	1.6	1.6	chr6	1625684	1625744	(169180235)	+	GA-rich	Low_complexity	1	62	(0)	3316398
1651	23.9	11.1	1.2	chr6	2989587	2990082	(167815897)	C	LTR73	LTR/ERV1	(21)	551	1	3318211
16	21.5	2.0	2.0	chr6	15245869	15245918	(155560061)	+	(GCTGGCG)n	Simple_repeat	1	51	(0)	3337658
13	27.0	4.0	3.8	chr6	26156949	26157024	(144648955)	+	(AGCCA)n	Simple_repeat	1	79	(0)	3354735
1354	19.2	3.9	0.6	chr6	27178168	27178461	(143627518)	+	LTR10B2	LTR/ERV1	201	500	(3)	3356434
1523	3.4	1.6	0.0	chr6	27178469	27178647	(143627332)	+	HERVIP10B3-int	LTR/ERV1	3	184	(7419)	3356434
748	2.4	0.0	0.0	chr6	27505828	27505909	(143300070)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3357009
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
13	0.0	0.0	0.0	chr6	27754388	27754404	(143051575)	+	(AAT)n	Simple_repeat	1	17	(0)	3357537
258	29.5	0.0	0.0	chr6	27754415	27754475	(143051504)	C	tRNA-Val-GTY	tRNA	(15)	61	1	3357538
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
247	33.1	6.1	0.0	chr6	33571611	33571734	(137234245)	+	MIRb	SINE/MIR	123	254	(14)	3366761
16	8.3	0.0	0.0	chr6	35728127	35728152	(135077827)	+	(CGGG)n	Simple_repeat	1	26	(0)	3371015
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
19	0.0	0.0	0.0	chr6	36028792	36028812	(134777167)	+	(T)n	Simple_repeat	1	21	(0)	3371677
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
7127	13.0	5.2	3.8	chr6	37221661	37222920	(133583059)	C	MER52C	LTR/ERV1	(0)	1278	1	3374268
1690	22.7	8.1	5.2	chr6	37222921	37223513	(133582466)	+	L1MEd	LINE/L1	903	1517	(5569)	3374265
1018	23.8	8.8	1.1	chr6	38248881	38249249	(132556730)	+	L1M6	LINE/L1	1488	1930	(789)	3376090
1848	15.4	0.3	4.1	chr6	38249251	38249543	(132556436)	C	AluJr	SINE/Alu	(8)	304	23	3376091
326	34.4	1.8	3.5	chr6	40999809	40999977	(129806002)	+	LTR78B	LTR/ERV1	3	168	(1128)	3380450
690	30.3	6.0	6.5	chr6	41001395	41001796	(129804183)	+	L4_A_Mam	LINE/RTE-X	4591	4990	(0)	3380454
502	29.0	8.0	5.2	chr6	43635317	43635607	(127170372)	+	L2b	LINE/L2	3076	3375	(0)	3385717
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
13	31.9	1.7	0.0	chr6	52421070	52421127	(118384852)	+	(TCTTTCT)n	Simple_repeat	1	59	(0)	3398524
672	20.9	3.8	8.2	chr6	54051871	54052089	(116753890)	C	MLT1K	LTR/ERVL-MaLR	(14)	581	373	3401117
12	21.7	0.0	2.9	chr6	70684926	70684960	(100121019)	+	(TTTC)n	Simple_repeat	1	35	(0)	3419618
406	23.7	15.1	0.7	chr6	70684969	70685104	(100120875)	+	MIRb	SINE/MIR	100	258	(10)	3419619
11	24.8	2.0	3.9	chr6	78868176	78868226	(91937753)	+	A-rich	Low_complexity	1	52	(0)	3430496
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
12	12.2	3.7	0.0	chr6	84774005	84774031	(86031948)	+	(TGCG)n	Simple_repeat	1	28	(0)	3438237
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
874	22.5	0.6	0.0	chr6	87944338	87944497	(82861482)	C	AluJr4	SINE/Alu	(14)	298	138	3442484
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
12	17.9	3.1	0.0	chr6	107116056	107116087	(63689892)	+	(CACA)n	Simple_repeat	1	33	(0)	3468220
508	28.1	8.9	2.6	chr6	110982407	110982636	(59823343)	+	MIRb	SINE/MIR	5	250	(18)	3474773
323	30.7	0.0	0.0	chr6	112233291	112233378	(58572601)	+	L2b	LINE/L2	3287	3374	(1)	3476811
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
13	13.2	6.7	4.2	chr6	125956943	125956987	(44848992)	+	(GAGGCGC)n	Simple_repeat	1	48	(0)	3495078
711	26.7	16.8	2.6	chr6	133340376	133340989	(37464990)	C	L2a	LINE/L2	(107)	3319	2598	3505115
23	22.6	6.2	2.0	chr6	135851783	135851824	(34954155)	+	(TCTT)n	Simple_repeat	1	98	(0)	3509029
2239	12.5	0.0	0.0	chr6	138494961	138495257	(32310722)	+	AluSx	SINE/Alu	1	297	(15)	3513054
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
599	25.9	9.1	6.6	chr6	151179467	151179870	(19626109)	C	MLT1K	LTR/ERVL-MaLR	(76)	519	29	3531497
438	27.6	3.5	2.4	chr6	154615686	154615852	(16190127)	+	LTR16A1	LTR/ERVL	1	169	(287)	3536707
20	3.8	0.0	0.0	chr6	157381083	157381109	(13424870)	+	(GAG)n	Simple_repeat	1	27	(0)	3540819
26	9.9	5.4	1.7	chr6	159693321	159693376	(11112603)	+	(CCGCC)n	Simple_repeat	1	59	(0)	3544447
360	19.7	6.2	0.0	chr6	165706637	165706712	(5099267)	C	L4_C_Mam	LINE/RTE-X	(203)	4935	4855	3552283
419	30.5	1.1	3.5	chr7	1291602	1291786	(158054187)	+	L4_A_Mam	LINE/RTE-X	4622	4788	(202)	3559636
371	24.1	1.1	0.0	chr7	2919770	2919856	(156426117)	+	L4_C_Mam	LINE/RTE-X	4875	4962	(176)	3562288
249	26.2	0.0	0.0	chr7	5331297	5331357	(154014616)	C	L4_B_Mam	LINE/RTE-X	(206)	4735	4675	3566788
935	28.9	2.5	7.1	chr7	5331370	5331640	(154014333)	+	Charlie4a	DNA/hAT-Charlie	7	253	(255)	3566789
364	25.0	10.9	10.9	chr7	20775011	20775239	(138570734)	C	UCON27	Unknown	(875)	393	165	3588252
997	15.2	4.2	1.6	chr7	29088147	29088333	(130257640)	+	MER53	DNA/hAT	1	192	(1)	3601009
606	24.8	13.4	2.8	chr7	30857913	30858124	(128487849)	C	L4_C_Mam	LINE/RTE-X	(171)	4967	4730	3603779
263	28.6	6.7	1.2	chr7	66930483	66930567	(92415406)	C	L2a	LINE/L2	(1337)	2082	1993	3651127
14	3.5	6.1	5.7	chr7	76303882	76303914	(83042059)	+	(GGTGG)n	Simple_repeat	1	35	(0)	3671829
14	8.5	0.0	3.7	chr7	98106950	98106976	(61238997)	+	(GGC)n	Simple_repeat	1	27	(0)	3701943
20	20.6	2.0	0.0	chr7	98107089	98107138	(61238835)	+	(CGGA)n	Simple_repeat	1	51	(0)	3701944
16	11.7	0.0	0.0	chr7	98107207	98107234	(61238739)	+	(GCT)n	Simple_repeat	1	28	(0)	3701945
187	32.8	12.2	1.5	chr7	99679673	99679870	(59666103)	C	MIRc	SINE/MIR	(1)	267	46	3705185
15	9.1	0.0	0.0	chr7	100272316	100272339	(59073634)	+	(TGC)n	Simple_repeat	1	24	(0)	3706206
236	36.2	8.5	4.6	chr7	100272470	100272750	(59073223)	C	L2b	LINE/L2	(28)	3347	3055	3706207
23	8.3	2.4	2.4	chr7	100477180	100477220	(58868753)	+	(GGA)n	Simple_repeat	1	42	(0)	3706674
2107	11.8	0.0	1.4	chr7	101143791	101144087	(58201886)	+	AluJb	SINE/Alu	9	301	(11)	3708094
665	31.8	2.5	0.0	chr7	101971561	101971755	(57374218)	C	L4_A_Mam	LINE/RTE-X	(169)	4821	4622	3710039
12	21.6	0.0	8.8	chr7	105013729	105013785	(54332188)	+	G-rich	Low_complexity	1	57	(0)	3715004
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
30	0.0	0.0	0.0	chr7	112205773	112205798	(47140175)	+	(AC)n	Simple_repeat	1	26	(0)	3725450
11	24.1	2.6	0.0	chr7	117020253	117020291	(42325682)	+	(TCCTGC)n	Simple_repeat	1	40	(0)	3731967
307	21.9	0.0	0.0	chr7	123535453	123535516	(35810457)	C	L4_B_Mam	LINE/RTE-X	(202)	4739	4676	3740555
2092	11.3	3.2	0.7	chr7	123535580	123535879	(35810094)	C	AluSx1	SINE/Alu	(4)	308	1	3740556
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
18	24.7	1.5	4.3	chr7	148699038	148699105	(10646868)	+	(CGG)n	Simple_repeat	1	69	(0)	3779245
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
627	4.1	0.0	0.0	chr7	149691180	149691252	(9654721)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	3781036
31	0.0	0.0	0.0	chr7	149799181	149799209	(9546764)	+	(TTG)n	Simple_repeat	1	29	(0)	3781181
887	28.0	14.8	3.0	chr7	149854553	149855044	(9490929)	C	MLT1E2	LTR/ERVL-MaLR	(64)	563	2	3781245
305	29.9	8.3	0.7	chr7	151368291	151368435	(7977538)	C	MLT1J1	LTR/ERVL-MaLR	(219)	225	69	3783331
12	7.2	10.3	0.0	chr7	152411483	152411511	(6934462)	+	(CTCC)n	Simple_repeat	1	32	(0)	3785063
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
425	34.7	5.8	6.7	chr8	688771	689111	(144449525)	C	L4_C_Mam	LINE/RTE-X	(210)	4928	4584	3795082
17	25.6	0.0	0.0	chr8	6840710	6840753	(138297883)	+	(TGAA)n	Simple_repeat	1	44	(0)	3802668
275	20.7	0.0	0.0	chr8	11065167	11065224	(134073412)	C	L4_C_Mam	LINE/RTE-X	(189)	4949	4892	3809033
675	14.6	1.0	0.0	chr8	22032353	22032455	(123106181)	+	U13_	snRNA	5	108	(0)	3825467
1563	22.4	2.7	7.0	chr8	22032511	22032898	(123105738)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	4	3825468
1791	15.8	0.3	3.5	chr8	22088716	22089025	(123049611)	+	AluJr	SINE/Alu	13	312	(0)	3825567
14	31.7	1.6	0.0	chr8	22109394	22109455	(123029181)	+	(GCGGAA)n	Simple_repeat	1	63	(0)	3825592
602	28.2	5.8	0.5	chr8	22227914	22228109	(122910527)	C	MIRb	SINE/MIR	(23)	245	39	3825793
517	32.2	5.0	1.3	chr8	23539539	23539765	(121598871)	+	MIRc	SINE/MIR	22	250	(18)	3828118
650	22.9	18.3	0.5	chr8	23539811	23540008	(121598628)	+	MIR	SINE/MIR	16	256	(6)	3828119
29	19.9	0.0	0.0	chr8	26867414	26867467	(118271169)	+	(GT)n	Simple_repeat	1	54	(0)	3833461
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
2014	12.1	1.0	2.2	chr8	33473442	33473754	(111664882)	+	AluJo	SINE/Alu	1	309	(3)	3844559
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
1989	10.1	5.2	5.5	chr8	42171877	42172183	(102966453)	C	AluSx1	SINE/Alu	(6)	306	1	3858269
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
15	25.0	3.1	3.0	chr8	47260886	47260950	(97877686)	+	(GGCGC)n	Simple_repeat	1	67	(0)	3861679
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
1123	14.4	11.2	3.1	chr8	98037006	98037234	(47101402)	C	Tigger3a	DNA/TcMar-Tigger	(97)	251	2	3932965
33	3.1	0.0	0.0	chr8	98037387	98037419	(47101217)	+	(TA)n	Simple_repeat	1	33	(0)	3932966
1310	24.7	13.9	0.5	chr8	125426771	125427156	(19711480)	C	LTR16A	LTR/ERVL	(0)	451	6	3975573
544	27.0	12.7	1.3	chr8	125427176	125427404	(19711232)	C	LTR33A	LTR/ERVL	(269)	262	4	3975572
332	23.4	1.3	1.3	chr8	129992854	129992931	(15145705)	C	L4_B_Mam	LINE/RTE-X	(171)	4770	4693	3984125
188	30.6	9.3	1.0	chr8	141521512	141521610	(3617026)	C	L2b	LINE/L2	(10)	3365	3258	4003741
344	24.0	3.0	0.0	chr8	141521702	141521797	(3616839)	+	L4_C_Mam	LINE/RTE-X	4851	4949	(189)	4003742
37	0.0	0.0	0.0	chr8	141521877	141521910	(3616726)	+	(T)n	Simple_repeat	1	34	(0)	4003743
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
2220	19.0	7.0	0.8	chr8	143995654	143996178	(1142458)	+	MER90a	LTR/ERV1	29	588	(26)	4006929
27	20.8	1.8	0.0	chr9	14322297	14322353	(124072364)	+	(GT)n	Simple_repeat	1	58	(0)	4028795
17	4.3	0.0	0.0	chr9	20622409	20622432	(117772285)	+	(CGCT)n	Simple_repeat	1	24	(0)	4038138
18	7.8	0.0	0.0	chr9	20622452	20622478	(117772239)	+	(AGC)n	Simple_repeat	1	27	(0)	4038139
15	22.0	1.7	5.1	chr9	20622547	20622604	(117772113)	+	G-rich	Low_complexity	1	59	(0)	4038140
2523	14.6	4.9	4.5	chr9	33878634	33878983	(104515734)	C	MER83	LTR/ERV1	(81)	367	1	4056201
1578	15.1	4.7	0.8	chr9	33878989	33879233	(104515484)	+	AluJb	SINE/Alu	30	284	(28)	4056203
213	33.3	5.3	3.4	chr9	34612812	34612960	(103781757)	C	L2	LINE/L2	(892)	2527	2376	4057682
527	20.0	6.5	0.0	chr9	37426205	37426319	(100968398)	C	MIRc	SINE/MIR	(50)	218	96	4062647
229	21.6	0.0	1.9	chr9	37426399	37426450	(100968267)	C	L4_C_Mam	LINE/RTE-X	(192)	4946	4896	4062648
611	33.0	11.0	2.1	chr9	38015296	38015682	(100379035)	+	L4_C_Mam	LINE/RTE-X	4525	4950	(188)	4063793
12	15.8	0.0	3.3	chr9	75890707	75890736	(62503981)	+	(GAGC)n	Simple_repeat	1	30	(0)	4091628
268	34.7	8.2	1.5	chr9	76459660	76459864	(61934853)	C	MIRb	SINE/MIR	(47)	221	2	4092595
14	21.4	1.6	6.5	chr9	86947292	86947352	(51447365)	+	(GCCCGCT)n	Simple_repeat	1	62	(0)	4108706
276	33.8	10.8	1.3	chr9	87066837	87066995	(51327722)	+	LTR103_Mam	LTR/ERV1?	289	464	(11)	4108879
360	29.2	2.2	3.8	chr9	98766450	98766634	(39628083)	C	L4_C_Mam	LINE/RTE-X	(211)	4927	4746	4127150
85	1.3	0.0	0.0	chr9	106864040	106864116	(31530601)	+	(CT)n	Simple_repeat	1	77	(0)	4139698
17	16.4	0.0	0.0	chr9	106864157	106864190	(31530527)	+	(GCT)n	Simple_repeat	1	34	(0)	4139699
368	33.7	4.5	0.5	chr9	114080246	114080436	(24314281)	+	L4_C_Mam	LINE/RTE-X	4766	4964	(174)	4152915
398	25.7	2.0	2.0	chr9	114462156	114462306	(23932411)	+	L4_A_Mam	LINE/RTE-X	4750	4900	(90)	4153710
13	25.2	0.0	7.7	chr9	127965552	127965616	(10429101)	+	(TCCC)n	Simple_repeat	1	65	(0)	4179423
17	9.7	2.9	2.8	chr9	128689312	128689346	(9705371)	+	(GCC)n	Simple_repeat	1	36	(0)	4181104
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
16	17.8	4.3	2.0	chr9	128689519	128689524	(9705193)	+	(CCCTCC)n	Simple_repeat	1	13	(36)	4181107
13	12.5	0.0	3.5	chr9	128689525	128689553	(9705164)	+	(CCCTT)n	Simple_repeat	1	29	(0)	4181108
16	17.8	4.3	2.0	chr9	128689554	128689565	(9705152)	+	(CCCTCC)n	Simple_repeat	14	49	(0)	4181107
14	22.1	2.4	0.0	chr9	129174640	129174681	(9220036)	+	(GGCGAG)n	Simple_repeat	1	43	(0)	4182239
14	11.6	0.0	3.3	chr9	129174722	129174751	(9219966)	+	(CTTT)n	Simple_repeat	1	30	(0)	4182240
230	37.4	1.8	0.0	chr9	129483551	129483657	(8911060)	+	MIRb	SINE/MIR	152	260	(8)	4182936
442	30.9	2.5	5.4	chr9	129656011	129656221	(8738496)	C	MIR	SINE/MIR	(4)	258	49	4183323
333	32.8	6.2	2.2	chr9	129656226	129656409	(8738308)	C	L4_C_Mam	LINE/RTE-X	(83)	5055	4864	4183324
17	7.0	3.3	0.0	chr9	129656410	129656439	(8738278)	+	(TTTG)n	Simple_repeat	1	31	(0)	4183325
613	17.9	0.0	0.9	chr9	130240712	130240818	(8153899)	+	MLT1J	LTR/ERVL-MaLR	70	175	(337)	4184633
350	24.3	10.6	8.2	chr9	130240849	130241032	(8153685)	+	MLT1J	LTR/ERVL-MaLR	321	509	(3)	4184633
53	15.9	8.3	0.0	chr9	130835649	130835781	(7558936)	+	(TC)n	Simple_repeat	1	144	(0)	4185898
1144	24.8	8.8	1.3	chr9	131168358	131168745	(7225972)	C	L1ME1	LINE/L1	(9)	6170	5751	4186533
268	7.9	0.0	0.0	chr9	134232596	134232633	(4162084)	C	L4_C_Mam	LINE/RTE-X	(212)	4926	4889	4191757
251	33.0	8.0	1.7	chr9	134257735	134257910	(4136807)	C	L4_B_Mam	LINE/RTE-X	(202)	4739	4604	4191796
215	34.5	5.7	9.9	chr9	134275521	134275742	(4118975)	+	MIRb	SINE/MIR	51	262	(6)	4191827
24	16.6	3.7	0.0	chr9	134641876	134641939	(3752778)	+	GA-rich	Low_complexity	1	66	(0)	4192279
312	30.0	5.1	0.3	chr9	134837234	134837384	(3557333)	C	L4_C_Mam	LINE/RTE-X	(200)	4938	4798	4192452
461	27.8	4.9	0.6	chr9	136509424	136509600	(1885117)	C	L4_C_Mam	LINE/RTE-X	(212)	4926	4742	4194451
186	39.1	0.2	0.8	chr9	136630737	136631565	(1763152)	+	(ACAC)n	Simple_repeat	1	831	(0)	4194567
716	14.8	3.7	3.7	chr9	137924609	137924797	(469920)	C	L1MD1	LINE/L1	(1573)	4573	4385	4196334
3114	18.3	6.5	0.2	chr9	137924800	137925438	(469279)	C	MER54B	LTR/ERVL	(0)	793	112	4196335
201	32.2	16.2	1.2	chrX	13899716	13899888	(142141007)	+	MIR	SINE/MIR	56	259	(3)	4381941
1049	25.7	5.5	7.4	chrX	39785021	39785427	(116255468)	C	L4_A_Mam	LINE/RTE-X	(0)	4990	4592	4421181
732	28.2	12.6	2.4	chrX	41302333	41302710	(114738185)	+	LTR16E2	LTR/ERVL	116	537	(31)	4424082
12	10.2	10.6	3.9	chrX	49101263	49101309	(106939586)	+	(ATCGACC)n	Simple_repeat	1	52	(0)	4437494
587	15.9	1.7	0.9	chrX	72305786	72305899	(83734996)	C	MIRc	SINE/MIR	(130)	138	24	4463099
19	16.5	0.0	0.0	chrX	72305953	72305986	(83734909)	+	(GT)n	Simple_repeat	1	34	(0)	4463100
18	0.0	0.0	0.0	chrX	72573225	72573244	(83467651)	+	(A)n	Simple_repeat	1	20	(0)	4463580
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
266	30.5	9.8	2.8	chrX	107708836	107709014	(48331881)	+	L2	LINE/L2	2668	2860	(559)	4504695
189	31.2	1.5	5.9	chrX	107709229	107709296	(48331599)	C	Tigger19b	DNA/TcMar-Tigger	(201)	349	285	4504696
16	11.2	3.3	0.0	chrX	108439943	108439972	(47600923)	+	(CTT)n	Simple_repeat	1	31	(0)	4505824
18	13.1	4.5	2.2	chrX	135098353	135098396	(20942499)	+	(CGC)n	Simple_repeat	1	46	(0)	4543934
21	29.9	0.8	5.9	chrX	135098548	135098665	(20942230)	+	(GCC)n	Simple_repeat	1	119	(0)	4543935
2248	10.0	0.3	0.0	chrX	136113534	136113823	(19927072)	C	AluSc8	SINE/Alu	(18)	293	3	4545428
277	27.5	10.1	5.5	chrX	136113849	136114083	(19926812)	+	L4_C_Mam	LINE/RTE-X	4883	5129	(9)	4545429