19	13.0	0.0	6.2	chr1	959305	959352	(247997070)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1202
1714	18.8	8.0	0.3	chr1	4234864	4235200	(244721222)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	5018
236	24.4	2.2	0.0	chr1	4235207	4235251	(244721171)	C	tRNA-Leu-TTA	tRNA	(0)	86	41	5019
2755	16.4	1.3	2.7	chr1	5359961	5360444	(243595978)	C	MER31A	LTR/ERV1	(4)	481	5	6639
309	26.4	3.0	7.9	chr1	5467574	5467713	(243488709)	+	MLT1C	LTR/ERVL-MaLR	22	154	(358)	6795
932	30.1	9.3	7.6	chr1	5467854	5468432	(243487990)	+	MLT1C-int	LTR/ERVL-MaLR	1	590	(797)	6795
224	35.9	12.2	3.9	chr1	7624676	7625006	(241331416)	C	L2c	LINE/L2	(3)	3384	3023	10084
1320	15.9	1.4	0.0	chr1	8442431	8442637	(240513785)	+	MSTA	LTR/ERVL-MaLR	216	425	(3)	11628
9089	17.3	3.1	1.1	chr1	8442641	8443180	(240513242)	+	MSTA-int	LTR/ERVL-MaLR	1	538	(1113)	11628
2286	10.5	0.0	3.4	chr1	9634139	9634461	(239321961)	C	AluSx	SINE/Alu	(0)	312	1	14031
2091	14.0	0.3	1.6	chr1	9634462	9634598	(239321824)	C	AluJb	SINE/Alu	(175)	137	1	14030
554	17.7	10.3	0.1	chr1	9634865	9635007	(239321415)	+	MLT1C	LTR/ERVL-MaLR	6	177	(213)	14032
1968	12.5	5.7	0.0	chr1	9635012	9635290	(239321132)	+	AluSx	SINE/Alu	3	298	(14)	14033
17	27.1	1.3	3.9	chr1	10210638	10210713	(238745709)	+	(CACCGCC)n	Simple_repeat	1	77	(0)	15342
13	16.0	9.3	0.0	chr1	10824813	10824855	(238131567)	+	(GCCCCAC)n	Simple_repeat	1	47	(0)	16412
68	23.8	1.8	6.6	chr1	11272907	11273190	(237683232)	+	(CCGCC)n	Simple_repeat	1	289	(0)	17351
271	22.7	1.3	1.3	chr1	11711169	11711244	(237245178)	C	Charlie24	DNA/hAT-Charlie	(6)	2444	2369	18291
3174	27.4	6.8	7.6	chr1	12535938	12536750	(236419672)	C	L1MEf	LINE/L1	(5292)	950	160	19928
1832	16.0	6.6	1.1	chr1	13854708	13855067	(235101355)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	22143
11602	10.7	1.2	0.1	chr1	13855068	13856679	(235099743)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	22143
183	26.2	0.0	0.0	chr1	16122921	16122962	(232833460)	+	MIR3	SINE/MIR	37	78	(130)	26736
322	31.8	21.4	0.7	chr1	16122967	16123240	(232833182)	+	L2c	LINE/L2	2821	3155	(232)	26737
531	34.6	6.5	6.2	chr1	18592488	18592919	(230363503)	+	MLT1J2	LTR/ERVL-MaLR	16	448	(0)	32000
545	25.5	6.8	5.2	chr1	19940858	19941031	(229015391)	+	MLT1K	LTR/ERVL-MaLR	5	181	(414)	34804
248	27.3	0.0	1.5	chr1	19941224	19941290	(229015132)	+	MLT1K	LTR/ERVL-MaLR	495	560	(2)	34804
245	28.7	12.8	3.4	chr1	21177346	21177493	(227778929)	C	MIRb	SINE/MIR	(45)	223	60	37303
2269	8.2	3.0	0.7	chr1	21177816	21178106	(227778316)	+	AluSx1	SINE/Alu	1	298	(14)	37304
1750	13.1	0.0	13.4	chr1	21499020	21499370	(227457052)	C	AluJb	SINE/Alu	(8)	304	1	38022
354	27.3	4.1	6.5	chr1	21499371	21499456	(227456966)	+	MLT1K	LTR/ERVL-MaLR	488	569	(26)	38021
370	33.3	3.1	4.4	chr1	21499476	21499773	(227456649)	+	MLT1K-int	LTR/ERVL-MaLR	1	294	(1093)	38021
3996	15.8	8.2	1.5	chr1	21794989	21795452	(227160970)	C	LTR27C	LTR/ERV1	(0)	767	258	38690
2314	11.3	0.0	0.0	chr1	21795453	21795754	(227160668)	+	AluSg	SINE/Alu	2	303	(7)	38691
380	26.7	8.8	11.7	chr1	23718425	23718743	(225237679)	C	L2a	LINE/L2	(123)	3264	2954	43185
204	28.2	2.3	7.6	chr1	23718949	23719040	(225237382)	+	L2c	LINE/L2	3280	3366	(21)	43188
219	17.8	16.7	0.0	chr1	23719056	23719100	(225237322)	C	MIR3	SINE/MIR	(66)	142	89	43189
592	24.4	10.3	3.2	chr1	25698261	25698471	(223257951)	+	MIRc	SINE/MIR	17	235	(33)	47658
285	31.8	6.8	10.0	chr1	25698433	25698669	(223257753)	C	L2c	LINE/L2	(3)	3423	3148	47659
2165	11.0	0.0	0.3	chr1	26822263	26822561	(222133861)	C	AluSx4	SINE/Alu	(12)	298	1	50239
424	13.2	3.8	0.0	chr1	26822562	26822637	(222133785)	+	LTR50	LTR/ERVL	717	795	(0)	50235
640	28.2	1.9	0.6	chr1	26822644	26822800	(222133622)	C	MLT1J2-int	LTR/ERVL-MaLR	(1127)	260	102	50240
844	28.4	7.8	0.9	chr1	26822927	26823274	(222133148)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	66	50240
258	32.0	0.0	0.0	chr1	27053914	27053988	(221902434)	+	MER5A	DNA/hAT-Charlie	109	183	(6)	50810
15	22.3	0.0	0.0	chr1	27054215	27054252	(221902170)	+	(TCTTT)n	Simple_repeat	1	38	(0)	50811
9768	12.0	3.4	9.6	chr1	27681167	27681803	(221274619)	C	THE1B-int	LTR/ERVL-MaLR	(1093)	538	3	52294
2415	12.1	1.9	2.5	chr1	27681806	27682171	(221274251)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	52294
2061	13.1	3.7	9.1	chr1	29399197	29399624	(219556798)	+	MSTA	LTR/ERVL-MaLR	1	404	(24)	56540
2724	11.7	0.5	0.0	chr1	29399636	29400046	(219556376)	+	MSTA-int	LTR/ERVL-MaLR	1	413	(1218)	56540
24725	4.9	0.3	0.1	chr1	29400060	29404325	(219552097)	C	L1PA5	LINE/L1	(11)	6143	1879	56541
1455	27.1	10.9	3.1	chr1	29869277	29870011	(219086411)	C	MLT1G-int	LTR/ERVL-MaLR	(625)	864	1	57419
941	28.2	5.4	4.0	chr1	29870019	29870537	(219085885)	C	MLT1G	LTR/ERVL-MaLR	(7)	562	18	57419
2350	15.0	6.1	0.5	chr1	30150904	30151305	(218805117)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	57942
9676	16.0	0.6	0.4	chr1	30151308	30152929	(218803493)	+	MSTA-int	LTR/ERVL-MaLR	1	1625	(6)	57942
540	28.6	15.1	0.5	chr1	30743878	30744098	(218212324)	+	MIRb	SINE/MIR	2	260	(8)	58961
683	28.9	0.0	4.4	chr1	31218364	31218569	(217737853)	C	MIRb	SINE/MIR	(8)	260	64	60155
251	23.2	14.5	1.8	chr1	31218577	31218690	(217737732)	+	MIR	SINE/MIR	118	248	(14)	60156
507	30.6	4.0	5.1	chr1	31837707	31837961	(217118461)	C	MIRb	SINE/MIR	(3)	265	14	61423
678	24.2	11.4	9.0	chr1	32919942	32920231	(216036191)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	298	64028
16	16.9	0.0	0.0	chr1	33280172	33280205	(215676217)	+	(GCACGG)n	Simple_repeat	1	34	(0)	64843
12	21.2	0.0	2.9	chr1	33280198	33280232	(215676190)	+	(ACC)n	Simple_repeat	1	35	(0)	64844
1377	19.9	7.8	4.5	chr1	34049804	34050160	(214906262)	+	MLT1A	LTR/ERVL-MaLR	5	374	(0)	66120
4493	14.9	0.3	0.3	chr1	34050180	34050859	(214905563)	+	ERVL-B4-int	LTR/ERVL	4241	4920	(794)	66121
2379	10.3	0.3	0.0	chr1	35318055	35318356	(213638066)	C	AluSx	SINE/Alu	(8)	304	2	68544
3366	19.7	4.5	4.9	chr1	35318357	35318449	(213637973)	+	Tigger6b	DNA/TcMar-Tigger	1231	1313	(284)	68543
2290	11.7	0.0	0.7	chr1	35318450	35318757	(213637665)	C	AluSz	SINE/Alu	(6)	306	1	68545
2922	8.3	5.4	6.0	chr1	37371194	37371640	(211584782)	+	MLT2A1	LTR/ERVL	1	444	(0)	72590
482	27.9	4.9	0.0	chr1	37401511	37401646	(211554776)	C	MIRc	SINE/MIR	(106)	162	20	72644
180	14.3	5.4	0.0	chr1	37401991	37402025	(211554397)	+	UCON132b	DNA/hAT-Tip100	7	43	(105)	72645
1437	23.6	1.6	0.0	chr1	38658795	38659108	(210297314)	C	MLT1J2-int	LTR/ERVL-MaLR	(1068)	319	1	75101
796	30.3	4.2	7.0	chr1	38659109	38659548	(210296874)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	22	75101
11687	20.0	1.9	4.3	chr1	39949475	39950696	(209005726)	C	MER21-int	LTR/ERVL	(2984)	1207	1	77760
2612	19.1	4.2	3.3	chr1	39950697	39951238	(209005184)	C	MER21A	LTR/ERVL	(0)	931	385	77760
575	26.7	12.8	3.0	chr1	40315775	40316006	(208640416)	C	MIRb	SINE/MIR	(7)	261	4	78567
11514	10.7	2.6	0.1	chr1	40893496	40895081	(208061341)	C	THE1D-int	LTR/ERVL-MaLR	(4)	1627	1	79762
1932	13.5	6.6	3.8	chr1	40895082	40895451	(208060971)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	79762
9322	17.4	1.2	0.1	chr1	43840807	43842332	(205114090)	C	MSTA-int	LTR/ERVL-MaLR	(107)	1544	2	85020
232	16.7	0.0	2.3	chr1	43842334	43842376	(205114046)	C	MSTA	LTR/ERVL-MaLR	(0)	428	387	85020
954	12.4	5.8	0.0	chr1	43842376	43842520	(205113902)	+	MSTA	LTR/ERVL-MaLR	248	401	(27)	85023
2266	9.5	2.6	0.0	chr1	43842525	43842818	(205113604)	+	AluSc8	SINE/Alu	1	302	(9)	85024
406	29.9	16.2	2.4	chr1	45551237	45551450	(203404972)	+	MIRb	SINE/MIR	13	256	(6)	88279
2068	15.4	3.9	2.8	chr1	47541526	47541885	(201414537)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	91829
12372	8.1	1.5	0.0	chr1	47541886	47543442	(201412980)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	91829
230	27.4	1.2	6.7	chr1	51345660	51345749	(197610673)	C	Charlie16a	DNA/hAT-Charlie	(58)	284	200	98492
197	30.9	1.8	0.0	chr1	53739685	53739739	(195216683)	C	MIR	SINE/MIR	(161)	101	46	103660
2805	8.2	0.3	0.0	chr1	55030953	55031306	(193925116)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	106391
12080	9.5	0.5	0.2	chr1	55031307	55032881	(193923541)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	106391
1472	20.3	1.9	1.0	chr1	55629683	55629991	(193326431)	C	MSTD-int	LTR/ERVL-MaLR	(1423)	312	1	107447
1889	18.2	4.0	2.8	chr1	55629994	55630383	(193326039)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	107447
6975	23.4	4.5	3.3	chr1	55745205	55746917	(193209505)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	2	107669
2134	17.0	3.4	0.2	chr1	55746919	55747313	(193209109)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	107669
11545	10.3	0.8	0.1	chr1	55933408	55934975	(193021447)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	107901
2344	10.8	1.4	1.7	chr1	55934976	55935331	(193021091)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	107901
383	22.6	16.8	0.0	chr1	56968918	56969041	(191987381)	C	MLT1H-int	LTR/ERVL-MaLR	(1259)	150	2	109880
716	29.6	8.3	6.8	chr1	56969043	56969527	(191986895)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	57	109880
461	32.7	13.5	3.0	chr1	57079287	57079848	(191876574)	+	L2b	LINE/L2	2566	3180	(195)	110078
491	25.4	0.9	0.0	chr1	58741785	58741894	(190214528)	+	MER5B	DNA/hAT-Charlie	13	123	(55)	113428
466	25.3	13.8	1.8	chr1	58742154	58742318	(190214104)	+	MLT1L	LTR/ERVL-MaLR	105	292	(318)	113429
442	23.0	1.0	0.0	chr1	61531492	61531591	(187424831)	+	MamGypLTR1a	LTR/Gypsy	683	783	(1)	118322
246	22.1	3.8	7.2	chr1	61531596	61531678	(187424744)	C	MIR	SINE/MIR	(18)	244	165	118323
5749	20.2	0.8	0.5	chr1	61565272	61566291	(187390131)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	629	118370
798	12.1	0.8	2.2	chr1	61566276	61566410	(187390012)	C	MSTB-int	LTR/ERVL-MaLR	(1518)	133	1	118370
2360	15.7	8.9	0.3	chr1	61566411	61566799	(187389623)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	118370
269	23.4	0.0	3.2	chr1	61572003	61572091	(187384331)	+	MamGypLTR2c	LTR/Gypsy	903	1029	(124)	118380
653	31.7	13.5	5.0	chr1	61572114	61572727	(187383695)	C	LTR78B	LTR/ERV1	(151)	1145	472	118381
2707	10.8	4.3	0.5	chr1	63042871	63043298	(185913124)	C	LTR56	LTR/ERV1	(0)	445	1	121269
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
1271	16.5	1.0	0.0	chr1	63466963	63467162	(185489260)	C	AluJr	SINE/Alu	(90)	222	21	122104
182	17.0	7.0	1.9	chr1	64357287	64357340	(184599082)	+	MIR	SINE/MIR	132	188	(74)	123733
440	26.5	9.3	1.3	chr1	64444728	64444876	(184511546)	+	MIR	SINE/MIR	3	164	(98)	123904
1554	27.2	7.8	2.3	chr1	64444879	64445392	(184511030)	C	LTR67B	LTR/ERVL	(3)	617	68	123905
3329	13.1	0.2	3.5	chr1	66030014	66030583	(182925839)	C	L1P4	LINE/L1	(2167)	3979	3429	126601
3079	16.1	1.5	0.2	chr1	66030584	66031123	(182925299)	+	L1PA16	LINE/L1	5611	6157	(9)	126602
729	20.9	7.4	14.4	chr1	67086023	67086362	(181870060)	+	LTR37B	LTR/ERV1	111	466	(2)	128192
357	29.5	4.4	5.2	chr1	67086464	67086599	(181869823)	+	LTR33	LTR/ERVL	107	241	(274)	128193
292	30.7	4.2	2.6	chr1	67086751	67086867	(181869555)	+	L3	LINE/CR1	3926	4044	(55)	128194
363	25.3	0.0	0.0	chr1	67950339	67950425	(181005997)	C	MER117	DNA/hAT-Charlie	(39)	158	72	129874
1785	18.0	0.3	7.4	chr1	68249846	68250069	(180706353)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	175	130313
498	25.7	8.1	0.0	chr1	68250070	68250182	(180706240)	C	FLAM_A	SINE/Alu	(19)	123	1	130314
1785	18.0	0.3	7.4	chr1	68250183	68250360	(180706062)	C	MLT1B	LTR/ERVL-MaLR	(216)	174	1	130313
1588	24.6	7.1	2.0	chr1	68250376	68251233	(180705189)	C	L1ME2z	LINE/L1	(361)	6083	5166	130315
2522	9.6	2.7	1.9	chr1	68779640	68780011	(180176411)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	131134
9558	12.0	4.2	3.8	chr1	68780012	68781584	(180174838)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	131134
976	27.1	6.4	3.3	chr1	69510508	69510869	(179445553)	+	L1MDa	LINE/L1	16	389	(6244)	132104
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
1818	21.6	6.6	0.4	chr1	70657469	70657938	(178298484)	+	L1ME1	LINE/L1	5644	6144	(35)	133791
4283	16.0	1.4	4.0	chr1	71173903	71174651	(177781771)	C	LTR1F1	LTR/ERV1	(0)	729	1	134495
14233	14.9	1.7	0.5	chr1	71389239	71390796	(177565626)	+	L1M1	LINE/L1	5470	7060	(664)	134796
1886	14.8	2.3	4.3	chr1	71390799	71391150	(177565272)	+	THE1B	LTR/ERVL-MaLR	1	345	(19)	134799
23	0.0	0.0	0.0	chr1	71391151	71391175	(177565247)	+	(A)n	Simple_repeat	1	25	(0)	134800
6892	10.9	1.6	0.0	chr1	71391188	71392156	(177564266)	+	THE1B-int	LTR/ERVL-MaLR	1	985	(595)	134799
10718	12.8	1.3	0.2	chr1	73447474	73449086	(175507336)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	137410
1825	19.0	9.1	1.0	chr1	73449087	73449479	(175506943)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	137410
9768	11.8	3.9	3.7	chr1	73911663	73913240	(175043182)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	137975
1942	17.4	3.2	1.4	chr1	73913241	73913608	(175042814)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	137975
16	5.2	0.0	0.0	chr1	75587905	75587924	(173368498)	+	(CT)n	Simple_repeat	1	20	(0)	140150
51	24.4	2.2	0.0	chr1	75588192	75588325	(173368097)	+	GA-rich	Low_complexity	1	137	(0)	140151
2009	22.2	8.1	2.2	chr1	76651784	76652367	(172304055)	+	L1ME1	LINE/L1	5528	6148	(31)	141737
8410	5.3	20.1	0.9	chr1	77531017	77532288	(171424134)	C	LTR12C	LTR/ERV1	(0)	1579	3	143049
464	26.6	8.5	2.3	chr1	77532476	77532682	(171423740)	+	MIRb	SINE/MIR	33	253	(9)	143050
1332	19.8	0.4	1.6	chr1	78598738	78598984	(170357438)	C	AluJb	SINE/Alu	(8)	304	61	144799
461	28.8	12.3	3.5	chr1	78598985	78599251	(170357171)	+	L1M6	LINE/L1	1980	2278	(4218)	144798
2559	10.6	1.4	0.0	chr1	78753497	78753853	(170202569)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	144986
10299	10.9	3.3	3.7	chr1	78753854	78755434	(170200988)	+	THE1B-int	LTR/ERVL-MaLR	1	1574	(6)	144986
2378	11.7	1.3	1.9	chr1	79164554	79164929	(169791493)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	145518
7889	11.8	15.4	4.2	chr1	79164935	79166326	(169790096)	+	THE1C-int	LTR/ERVL-MaLR	5	1580	(0)	145518
1092	3.7	0.0	0.0	chr1	79179437	79179570	(169776852)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1447	145528
1530	11.2	0.9	0.0	chr1	79179561	79179784	(169776638)	C	THE1B-int	LTR/ERVL-MaLR	(1354)	226	1	145528
2172	11.5	4.7	3.3	chr1	79179785	79180143	(169776279)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	145528
652	33.8	11.9	7.6	chr1	82341783	82342086	(166614336)	+	MLT1I-int	LTR/ERVL-MaLR	1	308	(1079)	149674
10398	11.8	2.2	1.9	chr1	82349564	82351138	(166605284)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	149685
2430	11.3	3.0	0.8	chr1	82351141	82351505	(166604917)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	149685
44	0.0	0.0	2.2	chr1	82451927	82451971	(166504451)	+	(TTTC)n	Simple_repeat	1	45	(0)	149824
2778	29.1	7.6	3.2	chr1	82451972	82452315	(166504107)	C	MLT1B-int	LTR/ERVL-MaLR	(803)	568	5	149823
11987	17.7	2.9	0.9	chr1	82452322	82454446	(166501976)	+	ERVL-B4-int	LTR/ERVL	3547	5714	(0)	149825
11209	10.2	1.0	2.3	chr1	83050326	83051926	(165904496)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	150673
2576	10.4	0.0	0.0	chr1	83051927	83052281	(165904141)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	150673
435	38.4	3.1	5.3	chr1	84374251	84374550	(164581872)	+	MamTip2	DNA/hAT-Tip100	8	300	(5)	152424
581	31.9	2.7	8.3	chr1	84374748	84375024	(164581398)	+	MIR	SINE/MIR	2	262	(0)	152425
238	24.8	7.9	7.1	chr1	84800089	84800201	(164156221)	C	L2-3_Crp	LINE/L2	(5)	2091	1978	153110
2607	24.6	11.4	0.6	chr1	84800217	84801233	(164155189)	C	L2a	LINE/L2	(167)	3259	2115	153094
1567	14.6	2.4	1.1	chr1	86035473	86035756	(162920666)	+	L1MB7	LINE/L1	5897	6184	(0)	155073
307	27.0	8.6	3.9	chr1	86035963	86036116	(162920306)	C	Zaphod	DNA/hAT-Tip100	(1651)	2380	2219	155074
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
2325	25.8	10.0	3.4	chr1	88406723	88407485	(160548937)	C	MLT1F-int	LTR/ERVL-MaLR	(632)	857	2	158431
498	32.6	1.1	0.0	chr1	88407487	88407670	(160548752)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	363	158431
1308	23.7	9.5	6.5	chr1	88407672	88408056	(160548366)	+	MLT1F-int	LTR/ERVL-MaLR	995	1400	(89)	158433
11481	10.7	1.5	0.1	chr1	88617860	88619466	(160336956)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	158693
1813	14.7	5.0	5.3	chr1	88619467	88619846	(160336576)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	158693
1855	14.6	15.2	1.6	chr1	89203974	89204342	(159752080)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	159609
11083	12.0	1.7	1.1	chr1	89204343	89205878	(159750544)	+	MSTA-int	LTR/ERVL-MaLR	1	1555	(76)	159609
10045	14.2	3.5	1.1	chr1	89316338	89318958	(159637464)	+	L1PA10	LINE/L1	6	2651	(3810)	159729
3114	17.3	3.9	2.0	chr1	89958851	89959235	(158997187)	+	L1MB7	LINE/L1	5503	5886	(298)	160614
3880	18.6	5.5	4.3	chr1	89959246	89960073	(158996349)	C	MER21C	LTR/ERVL	(5)	933	1	160617
1913	12.7	4.8	9.5	chr1	90348224	90348622	(158607800)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	161182
11449	11.2	0.9	0.4	chr1	90348625	90350245	(158606177)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	161182
3905	18.4	4.2	3.7	chr1	90989551	90990325	(157966097)	+	L1MB2	LINE/L1	5382	6167	(4)	162064
97	26.5	0.0	0.0	chr1	91040294	91040511	(157915911)	+	(AT)n	Simple_repeat	1	218	(0)	162137
409	11.1	0.0	0.0	chr1	91040532	91040589	(157915833)	+	Ricksha_c	DNA/MULE-MuDR	848	905	(1143)	162138
8316	6.9	0.2	1.1	chr1	91040590	91041730	(157914692)	+	HERVL-int	LTR/ERVL	1	1130	(4524)	162139
2356	10.6	0.0	0.0	chr1	91441442	91441742	(157514680)	+	AluSx	SINE/Alu	1	301	(11)	162717
21	0.0	0.0	0.0	chr1	91441782	91441804	(157514618)	+	(A)n	Simple_repeat	1	23	(0)	162718
23895	6.3	0.4	0.7	chr1	91441818	91447258	(157509164)	+	L1PA6	LINE/L1	1	5402	(744)	162719
563	26.1	8.4	4.2	chr1	93900803	93901036	(155055386)	C	MIRb	SINE/MIR	(0)	268	3	167006
191	27.5	1.9	3.8	chr1	93901047	93901099	(155055323)	+	L2c	LINE/L2	3298	3349	(38)	167007
2982	20.7	8.2	1.9	chr1	94200224	94201016	(154755406)	+	L1ME1	LINE/L1	5284	6130	(49)	167426
2175	12.1	4.9	2.3	chr1	96528500	96528853	(152427569)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	170780
11057	9.8	0.4	1.1	chr1	96528854	96529707	(152426715)	+	THE1B-int	LTR/ERVL-MaLR	1	860	(720)	170780
238	15.9	0.0	2.2	chr1	99537621	99537665	(149418757)	+	L2a	LINE/L2	3383	3426	(0)	174968
595	20.9	6.3	0.0	chr1	99537844	99537991	(149418431)	C	MER77B	LTR/ERVL	(17)	683	526	174969
2383	13.7	6.7	0.9	chr1	99538022	99538442	(149417980)	+	LTR44	LTR/ERV1	73	519	(0)	174970
365	30.7	12.9	2.9	chr1	99842303	99842510	(149113912)	+	LTR81B	LTR/Gypsy	1057	1288	(105)	175466
10122	11.2	8.2	0.5	chr1	100889425	100890927	(148065495)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	177175
620	35.5	13.1	2.5	chr1	101038556	101039307	(147917115)	+	L2c	LINE/L2	2534	3382	(5)	177389
11051	11.3	2.2	0.1	chr1	101039940	101041529	(147914893)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	177391
2202	13.7	7.7	1.7	chr1	101041530	101041931	(147914491)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	177391
5876	23.6	8.2	3.9	chr1	101095143	101096797	(147859625)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	2	177483
1862	21.4	1.6	0.8	chr1	101096799	101097160	(147859262)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	177483
4564	16.3	3.4	2.6	chr1	101356066	101357196	(147599226)	C	L1MA7	LINE/L1	(10)	6281	5138	177928
800	15.0	0.0	0.0	chr1	101800907	101801033	(147155389)	C	MLT1A0	LTR/ERVL-MaLR	(47)	318	192	178519
31126	22.6	1.5	2.0	chr1	102086264	102092788	(146863634)	C	HERVI-int	LTR/ERV1	(24)	7761	1270	178874
7732	13.4	1.5	0.2	chr1	103587999	103589194	(145367228)	C	THE1B-int	LTR/ERVL-MaLR	(369)	1211	1	180720
1767	16.7	7.4	2.9	chr1	103589196	103589541	(145366881)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	180720
1192	16.4	0.0	5.9	chr1	103589544	103589763	(145366659)	C	MER61E	LTR/ERV1	(362)	207	1	180721
3334	22.0	5.0	1.4	chr1	104503188	104504583	(144451839)	+	L1MB2	LINE/L1	4881	6374	(33)	181758
10864	11.3	1.2	0.0	chr1	104616112	104617671	(144338751)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	181881
1882	15.5	5.8	2.0	chr1	104617673	104618021	(144338401)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	181881
8393	21.0	1.1	1.2	chr1	105851567	105851774	(143104648)	+	MSTA-int	LTR/ERVL-MaLR	1447	1651	(0)	183336
1778	18.6	8.4	0.8	chr1	105851775	105852169	(143104253)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	183336
2417	15.1	2.6	0.7	chr1	106232710	106233129	(142723293)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	183806
6248	23.1	1.4	0.8	chr1	106233131	106234449	(142721973)	+	MSTA-int	LTR/ERVL-MaLR	2	1328	(323)	183806
2880	29.5	11.8	5.2	chr1	106303129	106304626	(142651796)	C	MSTC-int	LTR/ERVL-MaLR	(0)	1651	43	183893
2134	18.2	2.6	3.7	chr1	106304654	106305086	(142651336)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	183894
17097	16.7	1.4	1.8	chr1	106476624	106478326	(142478096)	+	L1PB2	LINE/L1	3068	4776	(2139)	184085
1808	17.2	4.1	3.1	chr1	106478327	106478686	(142477736)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	184088
11098	11.5	0.8	0.0	chr1	106478687	106480254	(142476168)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	184088
9760	13.1	3.4	2.2	chr1	106882527	106884081	(142072341)	C	THE1D-int	LTR/ERVL-MaLR	(7)	1573	1	184624
2259	14.4	1.8	0.5	chr1	106884082	106884457	(142071965)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	184624
2168	13.1	4.7	2.3	chr1	107236584	107236936	(141719486)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	185164
11668	9.4	0.9	0.4	chr1	107236937	107238507	(141717915)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	185164
27	6.9	4.3	0.0	chr1	107535853	107535900	(141420522)	+	(CAAAAA)n	Simple_repeat	1	50	(0)	185575
2313	21.8	10.8	2.2	chr1	108081801	108082399	(140874023)	C	MLT2F	LTR/ERVL	(2)	661	5	186328
489	27.0	6.2	0.0	chr1	108103430	108103581	(140852841)	C	LTR33A_	LTR/ERVL	(369)	162	1	186362
253	25.4	0.0	0.0	chr1	108103665	108103727	(140852695)	+	MLT1I	LTR/ERVL-MaLR	334	396	(15)	186363
798	30.3	4.6	2.1	chr1	108103745	108104081	(140852341)	+	MLT1I-int	LTR/ERVL-MaLR	2	347	(1040)	186363
2511	10.8	1.6	1.1	chr1	108173179	108173551	(140782871)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	186464
9445	12.1	3.6	3.3	chr1	108173552	108175120	(140781302)	+	THE1C-int	LTR/ERVL-MaLR	1	1574	(6)	186464
9543	12.1	4.6	0.5	chr1	108784578	108786087	(140170335)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	6	187319
1950	14.1	7.5	1.4	chr1	108786091	108786442	(140169980)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	187319
13	9.6	2.6	7.5	chr1	109669581	109669619	(139286803)	+	(CCCACT)n	Simple_repeat	1	40	(0)	188931
14	23.1	1.9	3.6	chr1	109669620	109669630	(139286792)	+	(TCCCGTC)n	Simple_repeat	5	55	(0)	188932
4918	10.9	0.0	4.2	chr1	109669640	109670357	(139286065)	C	LTR12_	LTR/ERV1	(0)	688	1	188933
8056	19.4	6.8	1.3	chr1	109779532	109781163	(139175259)	C	MLT1A0-int	LTR/ERVL-MaLR	(6)	1729	2	189066
1519	18.1	10.4	2.1	chr1	109781166	109781498	(139174924)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	2	189066
269	34.1	5.6	1.5	chr1	112677189	112677325	(136279097)	+	L3	LINE/CR1	3700	3842	(257)	193563
291	27.5	0.0	2.8	chr1	112677660	112677730	(136278692)	+	L2b	LINE/L2	3306	3374	(1)	193567
185	17.8	11.8	0.0	chr1	112771616	112771660	(136184762)	+	MER5A	DNA/hAT-Charlie	24	74	(115)	193744
943	24.2	1.7	0.0	chr1	112771684	112771899	(136184523)	C	MIR	SINE/MIR	(27)	235	8	193745
10818	10.0	1.0	0.3	chr1	115394792	115396360	(133560062)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	198116
2468	11.4	0.8	0.0	chr1	115396361	115396712	(133559710)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	198116
2196	11.5	4.4	3.3	chr1	115572542	115572901	(133383521)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	198389
10783	10.9	1.2	0.6	chr1	115572902	115574471	(133381951)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	198389
5019	21.6	5.9	8.8	chr1	115820952	115822224	(133134198)	+	L1MC5	LINE/L1	7632	8910	(394)	198758
631	23.9	5.6	0.9	chr1	115822236	115822455	(133133967)	+	L1MC5	LINE/L1	9074	9304	(0)	198758
5334	15.2	4.2	2.5	chr1	116716281	116717365	(132239057)	+	L1MA7	LINE/L1	5148	6252	(39)	200155
211	38.1	5.5	0.6	chr1	116717471	116717626	(132238796)	+	L2	LINE/L2	2884	3047	(372)	200156
2392	12.5	0.3	0.0	chr1	117830066	117830368	(131126054)	C	AluSx	SINE/Alu	(8)	304	1	201854
248	12.8	2.5	0.0	chr1	117830370	117830408	(131126014)	+	MSTA	LTR/ERVL-MaLR	387	426	(0)	201853
3555	15.8	1.0	0.3	chr1	117830409	117830997	(131125425)	+	MSTA-int	LTR/ERVL-MaLR	1	593	(1058)	201853
11283	10.9	0.5	0.2	chr1	118375806	118377381	(130579041)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	202677
2200	14.9	0.5	3.2	chr1	118377382	118377755	(130578667)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	202677
2061	11.2	1.4	0.3	chr1	119141041	119141325	(129815097)	C	AluJb	SINE/Alu	(18)	294	7	203667
1848	16.6	12.8	0.8	chr1	119700561	119700936	(129255486)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	204418
11077	11.6	3.4	0.1	chr1	119700939	119702512	(129253910)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	204418
2620	7.7	1.4	0.0	chr1	120000886	120001235	(128955187)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	204840
1648	13.2	0.0	0.0	chr1	120001261	120001502	(128954920)	C	LSU-rRNA_Hsa	rRNA	(3347)	1688	1447	204841
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
2833	6.0	1.7	0.0	chr1	145760385	145760733	(103195689)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	211476
11825	9.4	0.9	0.1	chr1	145760734	145762300	(103194122)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	211476
2519	4.4	4.9	0.7	chr1	146377967	146378260	(102578162)	C	AluY	SINE/Alu	(3)	308	2	212536
2008	12.8	0.0	5.6	chr1	150206905	150207224	(98749198)	C	AluSx1	SINE/Alu	(10)	302	1	218521
2946	16.2	4.4	0.6	chr1	150207383	150207902	(98748520)	+	MER89	LTR/ERV1	1	541	(18)	218522
980	12.9	2.8	0.0	chr1	150207903	150208041	(98748381)	C	AluSx3	SINE/Alu	(16)	295	153	218523
2042	13.5	0.3	6.6	chr1	150758850	150759168	(98197254)	C	AluJr	SINE/Alu	(13)	299	1	219774
1638	19.9	5.8	0.9	chr1	150759171	150759640	(98196782)	C	L1MEi	LINE/L1	(5737)	1366	879	219775
17	25.7	0.0	0.0	chr1	151282307	151282352	(97674070)	+	(GCG)n	Simple_repeat	1	46	(0)	220903
265	29.7	4.3	5.9	chr1	151825597	151825714	(97130708)	+	MIR3	SINE/MIR	77	192	(16)	221940
1946	13.1	0.3	2.5	chr1	156368529	156368842	(92587580)	C	AluSz	SINE/Alu	(5)	307	1	230030
182	25.9	19.8	1.2	chr1	156648417	156648498	(92307924)	C	MIR	SINE/MIR	(74)	188	88	230521
2662	5.5	0.0	0.0	chr1	157102018	157102324	(91854098)	C	AluYk2	SINE/Alu	(3)	308	2	231281
696	19.4	1.8	16.7	chr1	157102325	157102398	(91854024)	C	MER5A1	DNA/hAT-Charlie	(92)	74	3	231278
11172	10.6	1.5	0.1	chr1	158828173	158829729	(90126693)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	233597
2161	12.7	1.9	5.8	chr1	158829732	158830108	(90126314)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	233597
1926	15.6	7.2	1.5	chr1	159417332	159417670	(89538752)	+	THE1B	LTR/ERVL-MaLR	1	360	(4)	234288
11243	11.2	0.6	0.0	chr1	159417673	159419242	(89537180)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	234289
22158	8.9	0.8	0.4	chr1	160511705	160518027	(88438395)	+	L1PA10	LINE/L1	1	6353	(0)	235870
13	17.2	4.9	2.3	chr1	161389847	161389887	(87566535)	+	(CTCCG)n	Simple_repeat	1	43	(0)	237441
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
2733	11.1	6.8	4.7	chr1	162496834	162497426	(86458996)	C	MER4B	LTR/ERV1	(0)	900	1	239242
333	32.5	8.5	5.4	chr1	163321388	163321592	(85634830)	+	MIRb	SINE/MIR	42	253	(15)	240578
10195	12.3	4.2	0.1	chr1	164092261	164093771	(84862651)	C	THE1B-int	LTR/ERVL-MaLR	(5)	1575	1	241636
1944	17.7	3.2	0.0	chr1	164093772	164094104	(84862318)	C	THE1B	LTR/ERVL-MaLR	(0)	364	21	241636
8760	18.0	2.5	2.9	chr1	164447920	164449575	(84506847)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	2	242118
1090	17.2	2.9	1.9	chr1	164449577	164449783	(84506639)	C	MSTB	LTR/ERVL-MaLR	(2)	424	216	242118
1023	10.4	0.0	0.8	chr1	164449785	164449918	(84506504)	+	AluSz	SINE/Alu	1	133	(179)	242119
2197	12.5	5.2	7.8	chr1	165078660	165079033	(83877389)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	243083
12047	9.9	2.4	0.0	chr1	165079034	165080571	(83875851)	+	THE1B-int	LTR/ERVL-MaLR	1	1576	(4)	243083
311	27.5	2.1	0.0	chr1	165143726	165143816	(83812606)	+	MIR3	SINE/MIR	106	198	(10)	243162
2207	13.9	1.0	0.0	chr1	166829537	166829830	(82126592)	+	AluSp	SINE/Alu	3	299	(14)	245763
2552	10.8	0.6	4.1	chr1	166829831	166829958	(82126464)	+	THE1A	LTR/ERVL-MaLR	236	355	(0)	245762
12372	9.5	0.9	0.2	chr1	166829959	166831526	(82124896)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	245762
3541	14.9	1.6	5.2	chr1	168819945	168820319	(80136103)	+	L1MB1	LINE/L1	5478	5827	(341)	248994
4014	29.5	2.5	3.5	chr1	168886893	168888550	(80067872)	+	L1PBa	LINE/L1	3	1644	(5219)	249102
4078	18.5	6.3	5.5	chr1	169216070	169216909	(79739513)	+	MER21B	LTR/ERVL	1	847	(21)	249640
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
403	27.1	3.0	7.0	chr1	174052411	174052581	(74903841)	C	L1ME4b	LINE/L1	(40)	852	689	256614
2165	13.3	6.9	1.4	chr1	175983209	175983552	(72972870)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	259539
11199	10.3	1.0	0.1	chr1	175983555	175985118	(72971304)	+	THE1B-int	LTR/ERVL-MaLR	3	1580	(0)	259539
1472	28.2	8.7	15.5	chr1	177555187	177556018	(71400404)	C	MSTD-int	LTR/ERVL-MaLR	(201)	1534	765	261802
1784	21.2	2.5	0.3	chr1	177556019	177556406	(71400016)	C	MSTD-int	LTR/ERVL-MaLR	(1338)	397	1	261802
1605	17.9	11.4	1.4	chr1	177556407	177556762	(71399660)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	261802
1395	13.4	3.1	3.1	chr1	177556763	177556821	(71399601)	+	L1M2	LINE/L1	5467	5521	(770)	261803
252	25.2	14.6	0.0	chr1	177773095	177773205	(71183217)	+	MLT1H2	LTR/ERVL-MaLR	404	533	(16)	262067
2448	28.3	10.8	4.9	chr1	177773233	177774168	(71182254)	+	MLT1H2-int	LTR/ERVL-MaLR	1	1003	(406)	262067
1902	15.4	0.0	1.4	chr1	178511088	178511373	(70445049)	+	AluJo	SINE/Alu	1	282	(30)	263190
2166	14.1	0.0	0.0	chr1	179221309	179221606	(69734816)	+	AluSz	SINE/Alu	1	298	(14)	264376
988	21.4	3.5	2.5	chr1	179288862	179289003	(69667419)	+	AluJb	SINE/Alu	133	281	(31)	264557
2281	12.6	0.3	0.0	chr1	180624422	180624731	(68331691)	C	AluSz	SINE/Alu	(1)	311	1	266698
2535	10.5	0.6	1.9	chr1	181528063	181528422	(67428000)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	268121
12153	9.0	0.2	0.0	chr1	181528423	181529998	(67426424)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	268121
376	26.1	15.1	1.9	chr1	182533093	182533299	(66423123)	C	L1ME4a	LINE/L1	(4)	6120	5882	269619
488	32.3	6.3	8.2	chr1	183029267	183029559	(65926863)	+	L2c	LINE/L2	2650	2936	(483)	270462
241	34.3	5.4	3.6	chr1	183029639	183029804	(65926618)	+	L2c	LINE/L2	3147	3328	(59)	270462
1569	31.7	3.3	1.8	chr1	187464520	187466062	(61490360)	C	L1PA17	LINE/L1	(5139)	2023	712	277055
1822	14.5	8.8	2.4	chr1	187946502	187946841	(61009581)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	277688
11290	9.6	2.3	0.0	chr1	187946842	187948384	(61008038)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	277688
2403	9.6	2.5	12.4	chr1	189905791	189906232	(59050190)	C	THE1D-int	LTR/ERVL-MaLR	(1183)	397	1	280211
2230	15.0	3.4	0.0	chr1	189906235	189906600	(59049822)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	280211
10825	11.6	0.7	0.2	chr1	190859826	190861398	(58095024)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	281429
963	16.4	0.0	1.8	chr1	190861399	190861409	(58095013)	+	MSTA	LTR/ERVL-MaLR	155	164	(264)	281426
1806	14.8	9.2	0.0	chr1	190861405	190861729	(58094693)	C	THE1B	LTR/ERVL-MaLR	(6)	358	1	281430
2143	15.6	1.4	1.9	chr1	191396594	191396959	(57559463)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	282082
11004	10.8	1.3	0.0	chr1	191396960	191398519	(57557903)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	282082
9848	11.2	4.7	3.0	chr1	193432259	193433811	(55522611)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	284862
1984	12.5	12.3	0.3	chr1	193433812	193434141	(55522281)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	284862
7720	11.0	1.6	0.6	chr1	194830571	194832528	(54123894)	+	L1PA13	LINE/L1	4175	6152	(11)	286647
602	19.7	1.4	5.5	chr1	195092527	195092671	(53863751)	C	L1MB1	LINE/L1	(83)	6106	5968	287016
792	21.3	1.1	4.6	chr1	195092671	195092867	(53863555)	+	L1MA10	LINE/L1	6133	6322	(12)	287017
10832	10.9	1.1	1.8	chr1	195642974	195644557	(53311865)	C	THE1B-int	LTR/ERVL-MaLR	(8)	1572	1	287667
1865	17.8	3.1	2.0	chr1	195644562	195644917	(53311505)	C	THE1B	LTR/ERVL-MaLR	(4)	360	1	287667
553	21.4	0.8	1.6	chr1	195644918	195645045	(53311377)	C	MLT1A0	LTR/ERVL-MaLR	(226)	139	13	287668
2047	17.3	3.0	0.0	chr1	196795104	196795456	(52160966)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	289095
2124	16.6	2.5	0.0	chr1	196919989	196920343	(52036079)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	289245
2097	13.6	4.7	0.9	chr1	197080334	197080681	(51875741)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	289449
10597	11.2	2.1	2.2	chr1	197080684	197082265	(51874157)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	289450
10253	12.6	3.3	0.5	chr1	198796298	198797882	(50158540)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	291692
2127	10.7	6.8	0.6	chr1	198797883	198798239	(50158183)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	291692
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
7050	21.9	8.1	2.5	chr1	203157038	203158665	(45797757)	C	MSTD-int	LTR/ERVL-MaLR	(6)	1729	2	299152
2281	16.8	1.0	2.5	chr1	203158668	203159069	(45797353)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	299152
1824	18.0	5.8	0.3	chr1	204063746	204064090	(44892332)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	300905
6162	10.8	15.7	2.1	chr1	204751965	204752739	(44203683)	+	MER52C	LTR/ERV1	1	954	(324)	302189
513	31.1	3.2	3.2	chr1	208132384	208132573	(40823849)	+	MIRb	SINE/MIR	16	210	(58)	307649
231	18.1	13.2	2.7	chr1	208461552	208461625	(40494797)	C	MLT1K	LTR/ERVL-MaLR	(38)	557	475	308181
596	22.8	1.7	7.6	chr1	208461907	208462091	(40494331)	C	MER5B	DNA/hAT-Charlie	(3)	175	2	308182
2272	17.2	5.9	0.7	chr1	209518380	209518812	(39437610)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	309771
6776	22.0	4.4	5.3	chr1	209518813	209520473	(39435949)	+	MSTB2-int	LTR/ERVL-MaLR	1	1646	(5)	309771
2538	6.6	18.5	0.0	chr1	210195301	210195678	(38760744)	+	LTR7B	LTR/ERV1	1	464	(0)	310752
308	31.1	4.8	0.0	chr1	210195740	210195858	(38760564)	C	MLT1H1-int	LTR/ERVL-MaLR	(1284)	125	1	310751
521	25.3	12.4	0.0	chr1	210195859	210196028	(38760394)	C	MLT1H1	LTR/ERVL-MaLR	(0)	591	398	310751
4536	7.6	2.6	1.8	chr1	210196067	210197082	(38759340)	C	MER11A	LTR/ERVK	(0)	1266	1	310753
6307	22.6	7.7	8.1	chr1	210412260	210414000	(38542422)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	2	311132
2242	17.1	0.6	0.6	chr1	210414003	210414367	(38542055)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	311132
274	31.2	15.1	1.0	chr1	210781901	210782094	(38174328)	+	L2b	LINE/L2	2956	3181	(194)	311657
1842	13.0	1.3	3.6	chr1	211500105	211500412	(37456010)	+	AluSx	SINE/Alu	2	302	(10)	312806
7601	19.4	4.0	7.0	chr1	211901228	211902959	(37053463)	+	MER52A	LTR/ERV1	100	1755	(0)	313587
2446	15.1	5.8	1.0	chr1	212194197	212194603	(36761819)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	314088
9489	16.9	1.3	1.0	chr1	212194605	212196249	(36760173)	+	MSTA-int	LTR/ERVL-MaLR	2	1651	(0)	314088
2026	28.9	5.9	5.3	chr1	213895710	213897033	(35059389)	C	MLT1J2-int	LTR/ERVL-MaLR	(3)	1384	1	316903
731	27.1	13.7	3.6	chr1	213897058	213897417	(35059005)	C	MLT1J2	LTR/ERVL-MaLR	(23)	425	24	316903
2280	10.9	2.2	2.2	chr1	214576016	214576370	(34380052)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	317923
11109	10.0	3.2	0.5	chr1	214576371	214577906	(34378516)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	317923
10741	11.8	7.0	1.9	chr1	215455834	215457565	(33498857)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	903	319092
857	19.2	7.5	0.0	chr1	215457561	215457721	(33498701)	C	Tigger4	DNA/TcMar-Tigger	(2557)	174	1	319093
10882	10.0	0.2	8.1	chr1	217037604	217039318	(31917104)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	321143
1914	16.2	1.9	3.0	chr1	217039319	217039686	(31916736)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	321143
2171	15.0	0.8	3.2	chr1	217205391	217205763	(31750659)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	321389
11173	10.6	1.0	0.1	chr1	217205764	217207327	(31749095)	+	THE1B-int	LTR/ERVL-MaLR	1	1578	(2)	321389
2280	8.9	7.2	1.1	chr1	220248700	220249051	(28707371)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	325933
9052	11.6	5.4	3.8	chr1	220249052	220250598	(28705824)	+	THE1C-int	LTR/ERVL-MaLR	1	1573	(7)	325933
507	31.0	1.5	1.9	chr1	221937871	221938034	(27018388)	C	MIR3	SINE/MIR	(41)	189	30	328417
8257	10.2	0.9	0.0	chr1	222063491	222064591	(26891831)	C	THE1B-int	LTR/ERVL-MaLR	(460)	1120	1	328594
2322	13.0	4.7	1.7	chr1	222064601	222064953	(26891469)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	328595
2408	12.5	7.8	0.8	chr1	222456885	222457278	(26499144)	+	MSTA	LTR/ERVL-MaLR	5	428	(0)	329154
9644	16.0	1.2	0.2	chr1	222457279	222458892	(26497530)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	329154
308	26.2	3.6	4.5	chr1	224583603	224583714	(24372708)	C	MER5A	DNA/hAT-Charlie	(1)	188	78	332822
10068	12.5	6.9	0.1	chr1	224909906	224911423	(24044999)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	2	333354
2114	11.0	6.8	1.4	chr1	224911425	224911784	(24044638)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	333354
1405	22.4	7.0	9.6	chr1	225582376	225582786	(23373636)	+	L1ME2z	LINE/L1	172	597	(5539)	334178
1759	23.3	13.6	4.1	chr1	225582886	225583154	(23373268)	+	L1ME2z	LINE/L1	1276	1557	(4685)	334178
20	7.5	4.3	4.2	chr1	225677063	225677108	(23279314)	+	G-rich	Low_complexity	1	48	(0)	334365
282	25.4	2.7	0.0	chr1	225962681	225962751	(22993671)	C	MIR3	SINE/MIR	(72)	136	64	334901
491	25.4	15.4	4.7	chr1	226480847	226481284	(22475138)	C	HAL1	LINE/L1	(1136)	1329	785	335986
200	34.3	4.8	2.0	chr1	226493101	226493201	(22463221)	C	MamRTE1	LINE/RTE-BovB	(1561)	2251	2148	336009
351	20.0	0.0	0.0	chr1	226493485	226493544	(22462878)	C	HUERS-P3-int	LTR/ERV1	(7069)	1850	1791	336010
3464	18.9	6.3	3.6	chr1	226493542	226494343	(22462079)	C	HUERS-P3-int	LTR/ERV1	(7267)	1652	748	336010
2718	9.2	1.4	0.0	chr1	226921889	226922245	(22034177)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	336704
2291	8.6	14.8	0.6	chr1	226922248	226922746	(22033676)	+	THE1B-int	LTR/ERVL-MaLR	1	573	(1007)	336704
3505	19.8	3.3	1.3	chr1	227285888	227286660	(21669762)	C	MSTB-int	LTR/ERVL-MaLR	(862)	789	1	337222
1887	18.7	3.3	8.0	chr1	227286669	227287116	(21669306)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	337222
405	18.3	2.4	0.0	chr1	228030507	228030588	(20925834)	+	MLT1A0	LTR/ERVL-MaLR	188	271	(94)	338200
307	25.9	2.9	3.8	chr1	228030649	228030793	(20925629)	+	L2a	LINE/L2	2966	3108	(318)	338199
2627	23.8	5.8	1.1	chr1	228296640	228297472	(20658950)	C	MLT1B-int	LTR/ERVL-MaLR	(459)	1030	2	338534
1312	17.8	3.6	0.0	chr1	228297488	228297779	(20658643)	C	MLT1B	LTR/ERVL-MaLR	(86)	304	2	338534
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1884	27.9	5.9	5.7	chr1	229192799	229193612	(19762810)	+	Charlie7	DNA/hAT-Charlie	346	1161	(1451)	339821
2310	10.4	0.0	0.3	chr1	229254514	229254811	(19701611)	+	AluSx	SINE/Alu	1	297	(15)	339952
239	33.3	3.4	5.8	chr1	229254879	229254999	(19701423)	+	MIR3	SINE/MIR	40	157	(51)	339953
1092	26.4	9.3	1.9	chr1	229284546	229285024	(19671398)	C	L1MEd	LINE/L1	(5611)	1475	958	340007
1708	19.1	1.1	1.8	chr1	229285027	229285309	(19671113)	C	AluJr	SINE/Alu	(31)	281	1	340008
13	12.2	2.4	7.1	chr1	229342214	229342254	(19614168)	+	G-rich	Low_complexity	1	42	(0)	340086
13	17.8	0.0	2.9	chr1	229342542	229342575	(19613847)	+	(CCGCC)n	Simple_repeat	1	34	(0)	340087
24	6.8	0.0	0.0	chr1	231626638	231626668	(17329754)	+	(GT)n	Simple_repeat	1	31	(0)	343832
15	0.0	0.0	0.0	chr1	231626668	231626684	(17329738)	+	(GC)n	Simple_repeat	1	17	(0)	343833
1346	22.1	8.6	0.3	chr1	232092233	232092541	(16863881)	+	MLT1G3	LTR/ERVL-MaLR	258	594	(1)	344503
430	22.6	13.1	3.6	chr1	232092547	232092684	(16863738)	+	MLT1G3-int	LTR/ERVL-MaLR	5	157	(1252)	344503
1381	25.0	8.9	2.4	chr1	232092729	232092827	(16863595)	C	L1ME3Cz	LINE/L1	(187)	810	699	344504
2298	10.0	1.4	0.0	chr1	232092828	232093108	(16863314)	+	AluSq2	SINE/Alu	1	285	(28)	344505
2220	7.4	1.0	6.4	chr1	233739921	233740231	(15216191)	+	AluSq	SINE/Alu	1	294	(19)	346845
1052	32.5	2.7	2.1	chr1	233757321	233757791	(15198631)	C	LTR16C	LTR/ERVL	(1)	488	15	346868
59	3.5	0.0	0.0	chr1	233904440	233904498	(15051924)	+	(AG)n	Simple_repeat	1	59	(0)	347066
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
12	11.6	3.3	3.2	chr1	233904670	233904699	(15051723)	+	(CGACC)n	Simple_repeat	1	31	(0)	347068
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2686	7.0	0.0	1.1	chr1	236161556	236161914	(12794508)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	351120
11372	8.8	1.3	0.0	chr1	236161915	236163473	(12792949)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	351120
214	25.4	3.1	4.5	chr1	236719110	236719175	(12237247)	C	L2b	LINE/L2	(18)	3357	3293	352151
11096	11.5	1.9	0.3	chr1	238074772	238076373	(10880049)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	3	354171
1932	13.7	5.8	2.2	chr1	238076375	238076741	(10879681)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	354171
9347	13.8	3.1	0.7	chr1	239943484	239944914	(9011508)	C	THE1D-int	LTR/ERVL-MaLR	(162)	1469	3	356899
7054	22.5	4.6	2.2	chr1	241445035	241446721	(7509701)	+	MLT1A1-int	LTR/ERVL-MaLR	8	1735	(0)	359299
200	28.2	3.7	2.8	chr1	243979767	243979872	(4976550)	C	L2a	LINE/L2	(54)	3372	3266	363402
12	11.6	6.9	0.0	chr1	244558719	244558747	(4397675)	+	(TCC)n	Simple_repeat	1	31	(0)	364357
30	3.1	0.0	0.0	chr1	244558766	244558798	(4397624)	+	(TCTCCT)n	Simple_repeat	1	33	(0)	364358
2574	15.6	3.1	0.5	chr1	244682858	244683294	(4273128)	C	MER31A	LTR/ERV1	(4)	481	33	364552
1834	15.6	0.4	0.0	chr1	244787067	244787341	(4169081)	C	AluSz	SINE/Alu	(36)	276	1	364768
2022	14.3	0.0	1.3	chr1	244787374	244787673	(4168749)	+	AluSz	SINE/Alu	1	296	(16)	364769
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
2058	17.9	5.5	3.8	chr1	248410468	248410913	(545509)	+	MSTB2	LTR/ERVL-MaLR	4	457	(0)	370376
5361	25.0	5.6	5.6	chr1	248410914	248412564	(543858)	+	MSTB2-int	LTR/ERVL-MaLR	1	1651	(0)	370376
234	21.7	4.2	4.2	chr10	690283	690354	(133107068)	+	MIRc	SINE/MIR	80	151	(117)	371735
6484	14.0	3.5	1.5	chr10	795600	796038	(133001384)	+	L1PA15-16	LINE/L1	1891	2343	(4510)	371852
2563	11.6	0.6	0.3	chr10	796040	796402	(133001020)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	371854
3318	18.7	8.0	5.9	chr10	796403	797317	(133000105)	+	THE1B-int	LTR/ERVL-MaLR	1	936	(644)	371854
294	25.8	4.1	5.1	chr10	6079767	6079864	(127717558)	+	HERV16-int	LTR/ERVL	1794	1890	(3777)	378860
535	32.5	4.3	2.4	chr10	6079929	6080133	(127717289)	+	HERV16-int	LTR/ERVL	2069	2277	(2719)	378860
1964	16.6	1.4	0.6	chr10	6854474	6854836	(126942586)	C	L1MB1	LINE/L1	(4)	6164	5799	380159
56	0.0	0.0	0.0	chr10	6854837	6854884	(126942538)	+	(CA)n	Simple_repeat	1	48	(0)	380160
2143	14.8	1.2	2.0	chr10	6854889	6855540	(126941882)	C	L1MB1	LINE/L1	(503)	5665	5019	380159
21	17.9	3.9	1.9	chr10	7932444	7932495	(125864927)	+	GA-rich	Low_complexity	1	54	(0)	381858
1741	19.0	0.0	0.7	chr10	7932670	7932979	(125864443)	C	AluJb	SINE/Alu	(0)	312	1	381859
838	14.9	0.0	2.2	chr10	8095113	8095246	(125702176)	+	AluJr	SINE/Alu	1	131	(181)	382119
669	21.0	2.4	0.0	chr10	8119051	8119174	(125678248)	C	AluJb	SINE/Alu	(185)	127	1	382160
15	12.2	0.0	0.0	chr10	8119639	8119665	(125677757)	+	(TTAT)n	Simple_repeat	1	27	(0)	382171
2728	6.2	0.0	0.3	chr10	10908215	10908519	(122888903)	C	AluY	SINE/Alu	(7)	304	1	386278
2916	22.9	6.3	2.4	chr10	12520980	12522189	(121275233)	C	L1MEf	LINE/L1	(2849)	3695	2422	389090
1315	23.8	12.4	6.2	chr10	14995226	14996674	(118800748)	C	SATR1	Satellite	(141)	1538	1	393417
1918	18.3	1.6	6.3	chr10	14996530	14999051	(118798371)	+	SATR2	Satellite	1	2402	(7)	393418
2517	16.6	0.9	1.4	chr10	16821787	16822214	(116975208)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	396435
6480	18.5	1.0	0.1	chr10	16822215	16823330	(116974092)	+	MSTB-int	LTR/ERVL-MaLR	1	1126	(525)	396435
626	16.9	1.7	0.8	chr10	17437023	17437140	(116360282)	+	MER65C	LTR/ERV1	321	439	(22)	397374
1772	14.2	0.7	5.1	chr10	17437174	17437469	(116359953)	C	AluJr	SINE/Alu	(27)	285	3	397377
61	0.0	0.0	0.0	chr10	17437611	17437665	(116359757)	+	(TTCC)n	Simple_repeat	1	55	(0)	397378
28	2.4	2.2	4.3	chr10	17437668	17437691	(116359731)	+	(TCTCTT)n	Simple_repeat	1	23	(0)	397379
191	33.1	20.9	3.2	chr10	18438637	18438886	(115358536)	C	L3	LINE/CR1	(149)	3950	3645	399102
2137	20.9	7.9	0.9	chr10	18439002	18439528	(115357894)	C	MER34A	LTR/ERV1	(4)	567	1	399103
719	24.9	9.4	5.2	chr10	19517670	19517902	(114279520)	C	MER34B-int	LTR/ERV1	(5941)	246	3	400704
2087	15.7	5.0	0.5	chr10	19517912	19518289	(114279133)	C	MER57D	LTR/ERV1	(15)	396	1	400704
22	7.4	0.0	0.0	chr10	20623381	20623409	(113174013)	+	(T)n	Simple_repeat	1	29	(0)	402295
253	28.2	2.5	0.0	chr10	20623663	20623740	(113173682)	C	CR1-3_Croc	LINE/CR1	(3)	3602	3523	402296
13	11.3	10.5	0.0	chr10	21295966	21296003	(112501419)	+	(CCTCCTCC)n	Simple_repeat	1	42	(0)	403340
1597	13.4	0.5	0.0	chr10	21296030	21296252	(112501170)	+	AluSx	SINE/Alu	1	224	(88)	403341
527	27.4	7.8	4.9	chr10	22447781	22448003	(111349419)	C	MIRb	SINE/MIR	(16)	252	23	405278
1707	17.6	0.0	1.8	chr10	22448059	22448342	(111349080)	C	AluJr	SINE/Alu	(20)	292	14	405279
362	34.3	1.1	1.7	chr10	22460216	22460396	(111337026)	C	Charlie19a	DNA/hAT-Charlie	(158)	228	49	405300
31	0.0	0.0	0.0	chr10	22460751	22460777	(111336645)	+	(CA)n	Simple_repeat	1	27	(0)	405301
264	31.2	1.0	2.0	chr10	22460940	22461037	(111336385)	+	LTR88c	LTR/Gypsy?	229	325	(537)	405302
1104	30.8	10.2	8.2	chr10	25031973	25032828	(108764594)	C	HAL1	LINE/L1	(1551)	956	62	409572
468	27.5	5.1	2.3	chr10	25032840	25033010	(108764412)	+	MLT1N2	LTR/ERVL-MaLR	387	562	(0)	409576
550	26.7	1.1	8.8	chr10	25340097	25340289	(108457133)	C	L1ME3A	LINE/L1	(5876)	366	189	410083
2323	25.6	7.7	2.3	chr10	25340447	25341326	(108456096)	+	L1MEg	LINE/L1	691	1622	(4462)	410086
2079	15.2	1.9	2.3	chr10	25356432	25356794	(108440628)	+	THE1B	LTR/ERVL-MaLR	1	426	(2)	410106
11245	10.6	0.6	0.1	chr10	25356797	25358369	(108439053)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	410106
1909	29.8	5.3	5.3	chr10	28228020	28228441	(105568981)	+	Charlie25	DNA/hAT-Charlie	1431	1837	(687)	414668
2411	9.8	1.6	0.0	chr10	28228484	28228790	(105568632)	+	AluSx	SINE/Alu	1	312	(0)	414670
308	28.7	1.0	9.8	chr10	28685997	28686108	(105111314)	+	MIRb	SINE/MIR	86	187	(81)	415557
351	29.9	8.7	4.5	chr10	36307413	36307633	(97489789)	+	L1M4	LINE/L1	541	669	(6009)	427799
2171	27.1	4.8	6.5	chr10	36307873	36308540	(97488882)	+	L1M4	LINE/L1	1176	2127	(4541)	427799
2036	15.2	2.2	2.7	chr10	37510347	37510712	(96286710)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	429679
10913	11.7	1.1	0.2	chr10	37510713	37512277	(96285145)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	429679
295	26.9	2.5	2.5	chr10	46225938	46226055	(87571367)	+	MIR	SINE/MIR	32	149	(113)	437374
263	21.0	16.0	1.0	chr10	49235791	49235891	(84561531)	C	L1ME4c	LINE/L1	(226)	604	486	441635
543	24.1	2.8	0.0	chr10	49235917	49236057	(84561365)	C	L1ME4c	LINE/L1	(391)	439	295	441635
6097	9.7	1.4	5.7	chr10	51455034	51455973	(82341449)	C	THE1B-int	LTR/ERVL-MaLR	(681)	899	1	444871
2361	13.0	0.8	2.7	chr10	51455974	51456344	(82341078)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	444871
218	35.1	7.3	1.2	chr10	52013643	52013809	(81783613)	C	L2	LINE/L2	(467)	2952	2775	445715
1911	15.2	4.7	3.2	chr10	52014152	52014526	(81782896)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	445716
43299	19.5	1.1	0.2	chr10	52946908	52955585	(80841837)	C	HERVS71-int	LTR/ERV1	(69)	8909	4	446973
10679	12.5	0.6	0.1	chr10	54226571	54228142	(79569280)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	448597
2021	13.3	4.7	4.1	chr10	54228143	54228504	(79568918)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	448597
2516	8.1	0.0	0.0	chr10	55263724	55264033	(78533389)	C	AluYm1	SINE/Alu	(1)	310	1	449934
11561	20.8	5.2	5.7	chr10	55264034	55266424	(78530998)	+	HUERS-P2-int	LTR/ERV1	751	3085	(3)	449933
2058	14.6	2.6	3.4	chr10	55860885	55861268	(77936154)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	450723
10353	13.8	1.6	0.9	chr10	55861271	55862888	(77934534)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	450723
10736	11.7	0.8	1.4	chr10	55896710	55898299	(77899123)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	450762
2379	11.9	0.6	0.3	chr10	55898300	55898653	(77898769)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	450762
3435	15.0	3.3	3.0	chr10	55917622	55918345	(77879077)	C	L1M2	LINE/L1	(849)	5451	4740	450781
2626	14.9	2.5	0.8	chr10	55918326	55918793	(77878629)	+	L1M2	LINE/L1	2238	2713	(3430)	450782
2149	17.8	3.8	1.2	chr10	56947681	56948095	(76849327)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	452111
7661	21.0	2.9	4.4	chr10	56948096	56949772	(76847650)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	452111
2446	9.9	2.8	0.3	chr10	57031168	57031513	(76765909)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	452229
10569	11.0	2.5	0.9	chr10	57031514	57033068	(76764354)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	452229
8468	17.1	5.8	1.3	chr10	58729944	58731500	(75065922)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	454539
2258	16.8	2.8	2.1	chr10	58731501	58731707	(75065715)	C	MSTA	LTR/ERVL-MaLR	(0)	428	218	454539
29	0.0	0.0	0.0	chr10	58731708	58731732	(75065690)	+	(GA)n	Simple_repeat	1	25	(0)	454540
2258	16.8	2.8	2.1	chr10	58731733	58731949	(75065473)	C	MSTA	LTR/ERVL-MaLR	(211)	217	1	454539
9796	12.3	3.5	4.1	chr10	61191855	61193443	(72603979)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	458229
2551	12.6	0.3	0.0	chr10	61193444	61193815	(72603607)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	458229
2145	12.0	0.0	1.0	chr10	63270177	63270468	(70526954)	C	AluSx	SINE/Alu	(23)	289	1	461449
1877	17.9	0.0	0.3	chr10	63270471	63270767	(70526655)	C	AluJb	SINE/Alu	(16)	296	1	461450
17	11.7	5.4	0.0	chr10	63304411	63304447	(70492975)	+	A-rich	Low_complexity	1	39	(0)	461533
1334	22.8	5.0	4.2	chr10	63672398	63672731	(70124691)	C	LTR16C	LTR/ERVL	(0)	489	153	462220
461	25.4	2.4	0.0	chr10	63713145	63713266	(70084156)	C	MamRep1879	DNA/hAT-Tip100?	(84)	132	8	462297
2705	26.7	6.4	4.3	chr10	65078312	65078368	(68719054)	C	L1ME3	LINE/L1	(898)	6556	6500	464254
1889	16.9	7.1	0.6	chr10	65078369	65078724	(68718698)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	464256
10067	13.1	3.0	0.5	chr10	65078725	65080263	(68717159)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	464256
1754	14.7	8.7	2.8	chr10	65278058	65278415	(68519007)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	464508
10359	12.1	2.5	2.1	chr10	65278416	65280040	(68517382)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	464508
503	31.8	4.3	0.6	chr10	67623584	67623760	(66173662)	+	LTR88a	LTR/Gypsy?	251	434	(382)	467683
2200	11.8	0.7	1.0	chr10	69044755	69045058	(64752364)	C	AluSx1	SINE/Alu	(9)	303	1	470725
15	15.0	0.0	10.9	chr10	69045076	69045130	(64752292)	+	(TAT)n	Simple_repeat	1	55	(0)	470726
591	23.2	9.8	2.0	chr10	69045225	69045422	(64752000)	C	L4_A_Mam	LINE/RTE-X	(99)	4891	4677	470727
2194	16.3	7.7	0.0	chr10	70606845	70607218	(63190204)	+	MLT1A1	LTR/ERVL-MaLR	1	405	(3)	473808
7341	20.4	1.7	7.3	chr10	70607222	70608786	(63188636)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1483	(252)	473808
210	24.4	6.8	3.7	chr10	71512110	71512254	(62285168)	C	MIRb	SINE/MIR	(120)	142	1	475425
626	28.1	4.2	3.2	chr10	71616944	71617153	(62180269)	+	MIRb	SINE/MIR	33	260	(8)	475617
465	29.8	10.3	2.5	chr10	71617550	71617718	(62179704)	C	Charlie7a	DNA/hAT-Charlie	(0)	272	95	475618
2155	12.1	2.3	0.0	chr10	71617719	71618016	(62179406)	+	AluSq4	SINE/Alu	1	305	(6)	475619
39	6.7	0.0	0.0	chr10	76954270	76954316	(56843106)	+	(CA)n	Simple_repeat	1	47	(0)	485178
606	32.1	6.0	2.9	chr10	79615151	79615394	(54182028)	C	MIRb	SINE/MIR	(13)	255	4	489916
483	17.6	1.1	0.0	chr10	79615466	79615556	(54181866)	C	MamGypLTR1a	LTR/Gypsy	(39)	745	654	489917
1497	25.2	3.0	2.4	chr10	82840884	82841346	(50956076)	+	MLT1C	LTR/ERVL-MaLR	1	466	(1)	494579
2032	16.5	0.5	1.3	chr10	82841469	82841822	(50955600)	C	MLT2C1	LTR/ERVL	(53)	509	1	494580
6108	25.6	7.1	1.6	chr10	83251947	83253486	(50543936)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1631	2	495151
1881	21.9	5.9	0.2	chr10	83253487	83253888	(50543534)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	495151
1957	16.9	4.0	1.6	chr10	83750420	83750785	(50046637)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	495820
2618	10.8	8.3	10.7	chr10	83750786	83751291	(50046131)	+	THE1C-int	LTR/ERVL-MaLR	1	493	(1087)	495820
9084	14.5	4.1	4.1	chr10	83752146	83753725	(50043697)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	495823
1514	18.1	11.3	1.2	chr10	83753726	83754067	(50043355)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	495823
330	24.4	1.5	9.4	chr10	88168429	88168577	(45628845)	C	MER104	DNA/TcMar-Tc2	(13)	168	32	502454
694	29.0	4.8	0.8	chr10	88168669	88168929	(45628493)	+	MLT1J-int	LTR/ERVL-MaLR	1	272	(1115)	502452
1945	14.8	12.8	2.4	chr10	90821671	90822052	(42975370)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	506369
11028	12.3	1.5	0.9	chr10	90822054	90823673	(42973749)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	506369
10638	10.9	3.6	7.1	chr10	91096597	91098236	(42699186)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	506788
2849	11.3	0.5	0.5	chr10	91098237	91098611	(42698811)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	506788
462	21.2	3.5	6.8	chr10	92756907	92757053	(41040369)	+	MIR	SINE/MIR	81	222	(40)	509833
14	24.7	0.0	0.0	chr10	95561502	95561540	(38235882)	+	G-rich	Low_complexity	1	39	(0)	514501
516	22.7	8.3	0.7	chr10	95561764	95561918	(38235504)	+	MIR	SINE/MIR	94	261	(1)	514502
2151	10.9	4.5	1.9	chr10	95920188	95920552	(37876870)	C	THE1D	LTR/ERVL-MaLR	(5)	376	2	515108
5925	16.1	4.2	0.0	chr10	95920554	95921598	(37875824)	C	L1MA3	LINE/L1	(6459)	1106	16	515104
504	30.9	4.9	1.1	chr10	97900262	97900438	(35896984)	C	MER103C	DNA/hAT-Charlie	(0)	297	114	518982
2225	13.4	13.1	0.5	chr10	99247698	99248071	(34549351)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	521141
11413	13.5	1.2	0.3	chr10	99248072	99249688	(34547734)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	521141
13	20.0	2.4	2.3	chr10	99329882	99329923	(34467499)	+	(GGAGC)n	Simple_repeat	1	43	(0)	521278
12	21.2	2.1	4.2	chr10	100009959	100010005	(33787417)	+	(CCGCCT)n	Simple_repeat	1	48	(0)	522513
266	15.1	0.0	7.0	chr10	100010421	100010477	(33786945)	+	UCON72	Unknown	64	116	(73)	522514
1873	16.5	1.9	1.6	chr10	100419647	100419955	(33377467)	+	AluJr	SINE/Alu	1	310	(2)	523318
730	28.6	15.1	2.4	chr10	100419956	100420636	(33376786)	C	L2a	LINE/L2	(18)	3408	2559	523319
2249	10.2	1.0	0.0	chr10	102184028	102184320	(31613102)	C	AluSp	SINE/Alu	(17)	296	1	526467
5340	8.2	0.3	3.1	chr10	102184321	102184505	(31612917)	C	THE1B-int	LTR/ERVL-MaLR	(1396)	184	1	526465
2033	14.4	4.7	2.5	chr10	102184506	102184861	(31612561)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	526465
2199	13.0	6.9	1.7	chr10	103258768	103259112	(30538310)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	528540
11515	9.7	0.7	2.6	chr10	103259113	103260391	(30537031)	+	THE1B-int	LTR/ERVL-MaLR	1	1280	(300)	528540
997	35.9	8.9	2.9	chr10	104472241	104473074	(29324348)	+	L2	LINE/L2	327	1215	(2204)	530759
10740	11.2	2.4	0.5	chr10	106326418	106327966	(27469456)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	2	533527
1921	15.9	4.9	2.5	chr10	106327968	106328322	(27469100)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	533527
5381	9.2	1.5	0.3	chr10	106328323	106329428	(27467994)	C	L1PA10	LINE/L1	(435)	5733	4612	533526
14405	16.0	2.8	0.8	chr10	108737653	108738754	(25058668)	C	L1PA15	LINE/L1	(2397)	4276	3176	537026
1097	15.7	3.3	0.5	chr10	108738756	108738960	(25058462)	C	MSTA-int	LTR/ERVL-MaLR	(1438)	213	3	537029
2244	17.5	4.0	0.2	chr10	108738963	108739374	(25058048)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	537029
9720	12.8	4.8	0.7	chr10	108977165	108978678	(24818744)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	537340
2178	10.0	5.3	3.1	chr10	109293878	109294228	(24503194)	+	THE1B	LTR/ERVL-MaLR	6	364	(0)	537801
11329	9.6	2.2	0.1	chr10	109294230	109295776	(24501646)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	537801
1939	14.1	4.4	4.1	chr10	110047969	110048330	(23749092)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	538837
11327	9.6	0.9	1.1	chr10	110048332	110049605	(23747817)	+	THE1B-int	LTR/ERVL-MaLR	1	1281	(299)	538837
2240	13.0	6.9	1.4	chr10	111648929	111649272	(22148150)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	541410
10882	10.5	0.4	0.1	chr10	111649273	111650842	(22146580)	+	THE1B-int	LTR/ERVL-MaLR	1	1574	(6)	541410
194	24.5	0.0	3.6	chr10	113348697	113348751	(20448671)	C	L2c	LINE/L2	(1)	3386	3334	544170
248	25.6	4.2	9.0	chr10	113348893	113349162	(20448260)	C	L2c	LINE/L2	(245)	3142	2878	544170
2353	24.8	5.6	1.9	chr10	116040675	116041322	(17756100)	C	L1MC4	LINE/L1	(129)	7913	7240	548218
1863	24.2	11.3	1.6	chr10	116041325	116041882	(17755540)	C	L1MC4	LINE/L1	(957)	7085	6467	548218
199	25.0	0.0	0.0	chr10	116622722	116622765	(17174657)	+	L2c	LINE/L2	3293	3336	(51)	549089
643	23.8	10.2	1.5	chr10	116622787	116622991	(17174431)	+	MIR	SINE/MIR	37	261	(1)	549090
1186	20.1	2.3	3.3	chr10	117352706	117353008	(16444414)	C	LTR8A	LTR/ERV1	(0)	727	428	550298
235	32.3	9.7	0.0	chr10	117595919	117596011	(16201411)	C	MER91A	DNA/hAT-Tip100	(6)	190	88	550735
223	36.9	1.2	0.0	chr10	117595998	117596081	(16201341)	C	MER91A	DNA/hAT-Tip100	(38)	158	74	550736
264	24.4	5.8	3.7	chr10	117596136	117596271	(16201151)	C	MER112	DNA/hAT-Charlie	(76)	185	47	550737
1973	15.7	7.1	1.5	chr10	118488951	118489293	(15308129)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	552133
12092	8.0	1.3	0.3	chr10	118489294	118490857	(15306565)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	552133
11600	9.6	0.5	0.2	chr10	121755882	121757457	(12039965)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	557662
2282	11.6	2.2	2.8	chr10	121757458	121757820	(12039602)	C	THE1B	LTR/ERVL-MaLR	(0)	364	4	557662
1281	24.6	0.6	4.3	chr10	121766338	121766686	(12030736)	+	L1MD1	LINE/L1	14	349	(6284)	557676
2903	18.3	12.1	5.3	chr10	121766710	121767569	(12029853)	+	L1MD1	LINE/L1	3797	4722	(1815)	557676
730	29.2	5.1	4.0	chr10	121984421	121984673	(11812749)	C	HERV16-int	LTR/ERVL	(4739)	257	2	558079
540	17.5	14.9	0.0	chr10	121984675	121984794	(11812628)	C	LTR16A	LTR/ERVL	(0)	451	311	558079
576	22.7	8.6	0.0	chr10	121984804	121984931	(11812491)	C	LTR16A	LTR/ERVL	(311)	140	1	558079
283	30.5	0.8	0.8	chr10	121984944	121985062	(11812360)	C	HAL1ME	LINE/L1	(365)	2100	1982	558080
256	33.2	20.7	0.0	chr10	122366774	122367083	(11430339)	C	L2	LINE/L2	(526)	2893	2503	558760
271	26.2	0.0	0.0	chr10	122367474	122367534	(11429888)	C	MER5B	DNA/hAT-Charlie	(3)	175	115	558761
2836	19.4	10.5	0.8	chr10	122367535	122368184	(11429238)	+	L1ME3	LINE/L1	5434	6154	(8)	558762
604	27.9	10.2	6.0	chr10	123551182	123551762	(10245660)	C	L2b	LINE/L2	(31)	3344	2730	560500
228	23.8	6.7	9.7	chr10	123551984	123552076	(10245346)	C	MIRb	SINE/MIR	(159)	109	20	560498
2470	5.2	0.3	2.9	chr10	123552083	123552388	(10245034)	C	AluYj4	SINE/Alu	(12)	299	2	560501
452	29.4	14.3	3.9	chr10	125131621	125131900	(8665522)	C	MLT1J2	LTR/ERVL-MaLR	(22)	426	113	563016
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
25	9.6	6.6	3.1	chr10	130109555	130109615	(3687807)	+	(CTATA)n	Simple_repeat	1	65	(0)	569112
1016	30.0	5.4	0.6	chr10	130109646	130109964	(3687458)	+	MLT1L-int	LTR/ERVL-MaLR	3	337	(1050)	569113
10012	12.2	7.3	3.7	chr10	131151122	131152689	(2644733)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	570286
2442	11.9	5.0	0.8	chr10	131152692	131153056	(2644366)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	570286
226	27.3	3.8	2.5	chr10	132028430	132028508	(1768914)	C	L1MD3	LINE/L1	(20)	7975	7896	571244
423	14.5	0.0	8.4	chr10	132029126	132029208	(1768214)	C	SVA_F	Retroposon/SVA	(860)	515	440	571245
11899	10.0	0.5	0.0	chr10	132599065	132600636	(1196786)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	571826
2896	7.1	0.3	0.0	chr10	132600638	132600990	(1196432)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	571826
3237	26.1	14.9	3.7	chr10	132841091	132842627	(954795)	C	MSTC-int	LTR/ERVL-MaLR	(13)	1722	2	571980
2729	13.3	4.5	0.0	chr10	132842628	132843034	(954388)	C	MSTC	LTR/ERVL-MaLR	(2)	426	1	571980
14111	15.1	9.1	1.5	chr10	133484668	133486458	(310964)	C	L1MA4A	LINE/L1	(1804)	5758	3739	572560
402	18.5	1.4	5.6	chr10	133566377	133567481	(229941)	+	G-rich	Low_complexity	1	1121	(0)	572642
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
12	16.0	0.0	3.3	chr11	833440	833469	(134253153)	+	(GGC)n	Simple_repeat	1	30	(0)	574003
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
39	29.0	0.0	2.8	chr11	1396162	1396302	(133690320)	+	(CCCTCGT)n	Simple_repeat	1	141	(0)	574580
7209	20.8	5.3	0.3	chr11	2219029	2220589	(132866033)	C	MSTB1-int	LTR/ERVL-MaLR	(6)	1645	3	575546
2950	12.0	1.2	0.7	chr11	2220590	2221017	(132865605)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	1	575546
12213	8.6	0.5	0.0	chr11	2478698	2480270	(132606352)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	575846
2633	10.5	0.6	3.0	chr11	2480271	2480643	(132605979)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	575846
15	9.6	2.7	5.3	chr11	2706908	2706944	(132379678)	+	G-rich	Low_complexity	1	38	(0)	576071
10852	10.9	2.8	1.1	chr11	3536889	3538441	(131548181)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	577177
2067	14.7	5.0	2.0	chr11	3538442	3538794	(131547828)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	577177
2320	11.6	0.3	0.0	chr11	3658052	3658362	(131428260)	+	AluSx1	SINE/Alu	1	312	(0)	577399
2123	21.8	3.7	8.3	chr11	7791221	7792028	(127294594)	+	L1MA6	LINE/L1	5398	6124	(188)	583079
39	21.1	0.0	0.0	chr11	8079649	8079726	(127006896)	+	(TG)n	Simple_repeat	1	78	(0)	583473
872	29.8	0.4	1.2	chr11	8079757	8080004	(127006618)	+	MIR	SINE/MIR	16	261	(1)	583474
2259	11.3	0.0	0.0	chr11	8467666	8467956	(126618666)	+	AluSc5	SINE/Alu	2	292	(17)	584016
11806	8.9	1.2	0.7	chr11	8467957	8468015	(126618607)	C	THE1B-int	LTR/ERVL-MaLR	(1528)	52	1	584015
2236	12.4	2.7	2.5	chr11	8468016	8468378	(126618244)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	584015
325	23.2	21.1	2.8	chr11	11226189	11226330	(123860292)	+	MIRb	SINE/MIR	7	181	(87)	588846
11546	10.1	0.4	0.6	chr11	11824180	11825761	(123260861)	C	THE1A-int	LTR/ERVL-MaLR	(2)	1578	1	589805
2433	8.9	2.0	0.8	chr11	11825762	11826112	(123260510)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	589805
1860	12.1	1.0	0.7	chr11	12021879	12022169	(123064453)	+	L1MB5	LINE/L1	5254	5545	(629)	590090
2533	11.3	1.3	0.5	chr11	12022170	12022541	(123064081)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	590091
9820	12.9	3.7	4.0	chr11	12022542	12024121	(123062501)	+	THE1C-int	LTR/ERVL-MaLR	1	1575	(5)	590091
2264	10.8	0.3	1.3	chr11	13158772	13159087	(121927535)	+	AluSq2	SINE/Alu	1	313	(0)	591906
189	34.2	1.2	1.2	chr11	13159157	13159236	(121927386)	+	L3b	LINE/CR1	4715	4794	(438)	591907
1321	24.7	3.8	7.4	chr11	14110418	14110889	(120975733)	C	MLT2B3	LTR/ERVL	(7)	547	1	593330
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
12	20.8	6.8	0.0	chr11	14891919	14891962	(120194660)	+	(GGCCC)n	Simple_repeat	1	47	(0)	594638
2057	13.6	5.9	0.8	chr11	15016553	15016908	(120069714)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	594821
7837	13.3	14.8	0.6	chr11	15016909	15018263	(120068359)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	594821
1183	33.1	9.0	6.7	chr11	15791885	15793210	(119293412)	C	MLT1I-int	LTR/ERVL-MaLR	(28)	1359	1	596127
202	35.1	1.5	4.3	chr11	15793426	15793565	(119293057)	+	L2	LINE/L2	2481	2616	(803)	596128
2335	10.7	0.0	0.0	chr11	16873668	16873966	(118212656)	C	AluSx1	SINE/Alu	(13)	299	1	597616
453	31.0	13.9	2.0	chr11	17015243	17015538	(118071084)	+	L2a	LINE/L2	3083	3419	(7)	597891
11887	10.1	0.5	0.1	chr11	17867057	17868630	(117217992)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	599455
2424	9.5	4.7	2.2	chr11	17868631	17868985	(117217637)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	599455
958	21.2	3.3	4.5	chr11	18243816	18244062	(116842560)	+	LTR41C	LTR/ERVL	1	244	(457)	600102
484	27.5	7.2	6.3	chr11	18837116	18837336	(116249286)	+	MIRb	SINE/MIR	1	223	(45)	601316
15681	14.8	1.0	2.6	chr11	18837342	18844027	(116242595)	+	L1PA10	LINE/L1	3	6482	(1)	601317
3323	2.5	0.8	0.0	chr11	19114536	19114930	(115971692)	C	L1PA5	LINE/L1	(0)	6154	5757	601645
603	26.7	11.2	0.0	chr11	19115244	19115434	(115971188)	+	MIRb	SINE/MIR	39	253	(15)	601646
10557	11.1	4.6	0.3	chr11	20555093	20556604	(114530018)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	604126
2782	8.4	1.6	0.8	chr11	20556605	20556976	(114529646)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	604126
11162	10.9	0.4	0.6	chr11	21803170	21804752	(113281870)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	606033
2430	12.5	0.6	0.0	chr11	21804753	21805105	(113281517)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	606033
237	34.0	1.0	2.0	chr11	23723337	23723435	(111363187)	+	L2c	LINE/L2	3236	3333	(54)	608756
1894	12.2	5.0	5.7	chr11	24105769	24106152	(110980470)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	609230
8677	14.3	10.1	0.3	chr11	24106155	24107624	(110978998)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	609231
2139	15.4	1.6	0.8	chr11	25206600	25206960	(109879662)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	610757
3102	10.3	0.5	0.0	chr11	25206961	25207396	(109879226)	+	THE1B-int	LTR/ERVL-MaLR	1	438	(1142)	610757
2245	18.1	3.3	1.2	chr11	25821193	25821611	(109265011)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	611577
2952	17.9	4.3	0.0	chr11	25821612	25822148	(109264474)	+	MSTA-int	LTR/ERVL-MaLR	1	561	(1070)	611577
10411	13.6	1.6	0.1	chr11	28780161	28781716	(106304906)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	616064
22	0.0	0.0	0.0	chr11	28781717	28781740	(106304882)	+	(TA)n	Simple_repeat	1	24	(0)	616065
333	11.7	1.7	7.9	chr11	28781755	28781817	(106304805)	C	THE1B	LTR/ERVL-MaLR	(12)	416	304	616064
1185	6.6	0.0	0.0	chr11	28781818	28781969	(106304653)	+	L1PA5	LINE/L1	5999	6150	(4)	616066
226	22.6	0.0	0.0	chr11	30025737	30025789	(105060833)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	490	617838
18	28.5	1.8	0.0	chr11	30025888	30025942	(105060680)	+	(TC)n	Simple_repeat	1	56	(0)	617839
4692	7.2	0.3	0.0	chr11	30034342	30034976	(105051646)	C	THE1B-int	LTR/ERVL-MaLR	(943)	637	1	617851
2049	12.2	7.7	2.9	chr11	30034977	30035322	(105051300)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	617851
5942	9.1	1.0	0.1	chr11	31272928	31273730	(103812892)	C	THE1B-int	LTR/ERVL-MaLR	(770)	810	1	619732
2105	11.4	6.0	2.3	chr11	31273731	31274080	(103812542)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	619732
1983	14.0	0.3	11.8	chr11	32987929	32988309	(102098313)	+	MER1B	DNA/hAT-Charlie	3	339	(0)	622607
3527	8.5	0.4	0.0	chr11	32988405	32988865	(102097757)	C	LTR2	LTR/ERV1	(0)	463	1	622608
2067	10.9	0.7	0.0	chr11	33434192	33434467	(101652155)	+	THE1B	LTR/ERVL-MaLR	87	364	(0)	623503
316	15.7	0.0	0.0	chr11	33434474	33434524	(101652098)	C	tRNA-Leu-TTA	tRNA	(0)	86	36	623504
2985	5.8	0.3	4.8	chr11	33434525	33434921	(101651701)	C	HERVL-int	LTR/ERVL	(2506)	3148	2770	623505
667	31.9	10.1	7.1	chr11	34012649	34013185	(101073437)	+	MLT1K	LTR/ERVL-MaLR	38	592	(3)	624517
1815	14.4	6.3	6.1	chr11	37694455	37694817	(97391805)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	630219
10807	11.6	1.1	0.1	chr11	37694818	37696382	(97390240)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	630219
2706	17.1	4.0	0.0	chr11	38577505	38578001	(96508621)	C	MSTA-int	LTR/ERVL-MaLR	(1132)	519	2	631372
1780	19.3	9.1	0.3	chr11	38578003	38578392	(96508230)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	631372
10814	10.6	1.3	0.1	chr11	39099518	39101078	(95985544)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	632036
2147	12.9	4.1	3.1	chr11	39101079	39101438	(95985184)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	632036
2241	21.3	6.5	5.6	chr11	39101439	39101694	(95984928)	+	L1MC3	LINE/L1	7010	7252	(533)	632035
2156	13.2	2.0	1.1	chr11	39920653	39921004	(95165618)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	633158
11046	10.9	0.8	1.1	chr11	39921005	39921381	(95165241)	+	THE1A-int	LTR/ERVL-MaLR	1	381	(1199)	633158
1223	21.3	32.3	0.2	chr11	43974595	43974991	(91111631)	+	MLT1F	LTR/ERVL-MaLR	9	537	(11)	639304
921	19.3	10.9	1.6	chr11	43975003	43975244	(91111378)	+	MLT1F-int	LTR/ERVL-MaLR	1	267	(1222)	639304
4468	19.2	5.3	2.8	chr11	43975240	43976282	(91110340)	+	MLT1F-int	LTR/ERVL-MaLR	419	1489	(0)	639304
657	26.3	7.9	6.5	chr11	45279593	45279663	(89806959)	+	MIR	SINE/MIR	196	259	(3)	641803
845	21.9	0.6	0.0	chr11	46273447	46273615	(88813007)	C	MER104	DNA/TcMar-Tc2	(10)	171	2	643658
328	25.8	9.3	0.0	chr11	46273617	46273713	(88812909)	+	MIR	SINE/MIR	156	262	(0)	643657
22	11.0	0.0	2.4	chr11	47412294	47412334	(87674288)	+	(TGGCC)n	Simple_repeat	1	41	(0)	645855
315	28.1	6.6	5.0	chr11	47979393	47979572	(87107050)	+	L2b	LINE/L2	2964	3146	(241)	647274
210	24.8	5.8	6.7	chr11	47979604	47979707	(87106915)	+	MIR	SINE/MIR	65	167	(101)	647275
4219	12.3	0.3	0.5	chr11	56994119	56994741	(78091881)	C	THE1B-int	LTR/ERVL-MaLR	(958)	622	1	652886
2098	15.9	5.2	0.3	chr11	56994742	56995087	(78091535)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	652886
12216	11.2	0.7	0.5	chr11	60677495	60679121	(74407501)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	658659
2355	12.7	4.7	0.8	chr11	60679122	60679487	(74407135)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	658659
1160	22.8	7.5	4.5	chr11	62842647	62843022	(72243600)	C	LTR65	LTR/ERV1	(97)	572	185	662924
2434	9.6	0.0	0.0	chr11	62843122	62843423	(72243199)	+	AluSz6	SINE/Alu	1	302	(10)	662925
17	0.0	0.0	0.0	chr11	64626429	64626450	(70460172)	+	(TTAA)n	Simple_repeat	1	22	(0)	665959
425	26.2	15.5	7.7	chr11	65222973	65223179	(69863443)	C	MIRb	SINE/MIR	(1)	267	42	667088
30	6.0	0.0	0.0	chr11	66417986	66418020	(68668602)	+	(AC)n	Simple_repeat	1	35	(0)	669477
226	30.3	0.0	0.0	chr11	67507869	67507934	(67578688)	C	MIRc	SINE/MIR	(120)	148	83	671763
10935	10.6	2.9	1.1	chr11	67910863	67912414	(67174208)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	672446
2010	16.1	4.7	1.4	chr11	67912415	67912766	(67173856)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	672446
1023	31.4	5.7	4.0	chr11	68289214	68289664	(66796958)	C	MLT1J-int	LTR/ERVL-MaLR	(928)	459	1	673143
2126	19.5	6.3	0.9	chr11	68289710	68289991	(66796631)	+	Charlie1a	DNA/hAT-Charlie	887	1191	(264)	673144
14	13.0	5.9	0.0	chr11	69168279	69168312	(65918310)	+	G-rich	Low_complexity	1	36	(0)	674628
295	30.6	6.4	1.3	chr11	70889552	70889700	(64196922)	+	MER5A	DNA/hAT-Charlie	18	174	(15)	677510
849	20.6	6.2	0.0	chr11	70897387	70897566	(64189056)	+	MLT2C1	LTR/ERVL	150	341	(56)	677521
227	19.6	2.1	0.0	chr11	70897581	70897626	(64188996)	+	MLT1-int	LTR/ERVL-MaLR	1	47	(1324)	677522
19	8.3	0.0	0.0	chr11	70897936	70897961	(64188661)	+	(AC)n	Simple_repeat	1	26	(0)	677523
1992	13.8	2.6	3.0	chr11	70897962	70898265	(64188357)	C	AluSz6	SINE/Alu	(9)	303	1	677524
2054	15.3	4.7	2.0	chr11	71683286	71683639	(63402983)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	678617
10690	11.4	2.9	1.2	chr11	71683640	71685191	(63401431)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	678617
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
226	30.3	2.9	0.0	chr11	73143158	73143256	(61943366)	C	MIR3	SINE/MIR	(26)	182	81	681264
2635	5.6	0.0	0.0	chr11	74481872	74482177	(60604445)	+	AluY	SINE/Alu	1	306	(5)	684178
2086	13.1	1.3	1.0	chr11	74701973	74702277	(60384345)	+	AluJb	SINE/Alu	2	307	(5)	684641
187	29.8	12.5	0.0	chr11	74702434	74702517	(60384105)	+	MamTip2	DNA/hAT-Tip100	52	147	(158)	684642
489	27.6	11.6	1.0	chr11	75156016	75156216	(59930406)	C	MIRb	SINE/MIR	(7)	261	37	685438
3809	8.8	1.5	0.0	chr11	75156580	75157102	(59929520)	C	MER41A	LTR/ERV1	(0)	554	24	685439
860	22.9	9.4	3.9	chr11	76630594	76630784	(58455838)	C	L1MC5	LINE/L1	(10)	9294	9101	688359
660	18.0	4.0	0.8	chr11	76630785	76630906	(58455716)	+	AluJr	SINE/Alu	2	127	(185)	688360
860	22.9	9.4	3.9	chr11	76630909	76631025	(58455597)	C	L1MC5	LINE/L1	(204)	9100	8967	688359
2344	10.9	0.3	0.0	chr11	77248196	77248499	(57838123)	C	AluSg	SINE/Alu	(5)	305	1	689494
2301	11.3	2.8	1.4	chr11	77730591	77730949	(57355673)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	690487
11237	9.4	2.1	0.2	chr11	77730950	77732499	(57354123)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	690487
3156	15.6	7.0	1.6	chr11	77753701	77754107	(57332515)	+	LTR8A	LTR/ERV1	260	762	(58)	690522
1711	15.9	0.3	6.0	chr11	77855819	77856132	(57230490)	+	AluSz6	SINE/Alu	2	297	(15)	690740
10336	13.8	0.6	3.1	chr11	77856133	77856496	(57230126)	C	MSTA-int	LTR/ERVL-MaLR	(1263)	368	1	690736
2094	13.1	13.8	0.5	chr11	77856499	77856867	(57229755)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	690736
1852	15.3	5.8	1.6	chr11	81729408	81729772	(53356850)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	697826
6223	14.8	2.3	1.2	chr11	81729773	81729933	(53356689)	+	THE1D-int	LTR/ERVL-MaLR	1	157	(1474)	697826
1886	15.8	0.3	3.1	chr11	81729934	81730258	(53356364)	C	AluSx1	SINE/Alu	(0)	312	1	697827
11582	9.3	0.9	0.4	chr11	82943494	82945064	(52141558)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	699732
2081	15.1	3.3	2.5	chr11	82945065	82945425	(52141197)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	699732
1316	25.4	9.4	1.8	chr11	83197862	83198313	(51888309)	C	L1MCb	LINE/L1	(5555)	490	1	700228
7224	14.1	1.7	0.1	chr11	84002285	84003391	(51083231)	C	THE1D-int	LTR/ERVL-MaLR	(506)	1125	1	701607
2073	14.2	3.7	3.4	chr11	84003393	84003772	(51082850)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	701607
2133	12.8	4.3	0.9	chr11	88684626	88684963	(46401659)	+	THE1A	LTR/ERVL-MaLR	3	352	(3)	708956
11418	10.1	0.4	0.1	chr11	88684969	88686542	(46400080)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	708956
2074	16.5	1.6	1.3	chr11	91533289	91533668	(43552954)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	712883
8396	13.6	8.2	4.4	chr11	91533673	91535185	(43551437)	+	THE1D-int	LTR/ERVL-MaLR	5	1580	(0)	712883
37735	5.8	0.6	0.1	chr11	93103987	93108893	(41977729)	C	Harlequin-int	LTR/ERV1	(0)	6896	1966	715142
2189	11.8	0.3	0.0	chr11	93314000	93314295	(41772327)	+	AluSc	SINE/Alu	13	309	(0)	715417
7370	11.5	8.6	5.0	chr11	93314296	93314622	(41772000)	C	THE1B-int	LTR/ERVL-MaLR	(1251)	329	1	715416
2690	10.7	0.3	0.0	chr11	93314623	93314985	(41771637)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	715416
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
12351	9.6	0.6	0.9	chr11	94625641	94627224	(40459398)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	717433
2327	11.3	5.2	3.4	chr11	94627225	94627581	(40459041)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	717433
3252	10.8	4.6	0.2	chr11	95933550	95934029	(39152593)	+	LTR22C0	LTR/ERVK	1	502	(0)	719354
1885	17.1	4.3	3.6	chr11	96270759	96271305	(38815317)	+	MLT2A2	LTR/ERVL	1	554	(0)	719893
505	12.0	3.2	0.0	chr11	96271325	96271416	(38815206)	+	THE1C-int	LTR/ERVL-MaLR	1537	1631	(0)	719894
2765	8.7	1.6	0.5	chr11	96271417	96271787	(38814835)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	719894
418	30.0	8.4	1.0	chr11	96467887	96468095	(38618527)	+	Chap1_Mam	DNA/hAT-Charlie	1	226	(116)	720159
196	21.1	16.1	0.0	chr11	96468327	96468378	(38618244)	+	OldhAT1	DNA/hAT-Ac	2433	2494	(354)	720160
2086	12.4	2.6	1.3	chr11	96468518	96468697	(38617925)	C	AluSx1	SINE/Alu	(1)	311	127	720161
2547	24.0	3.3	3.2	chr11	97461124	97461830	(37624792)	+	MER52D	LTR/ERV1	1	1163	(960)	721250
8578	17.4	1.1	1.7	chr11	100620982	100622636	(34463986)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1645	1	725252
2034	16.0	9.3	1.3	chr11	100622637	100623029	(34463593)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	725252
183	15.2	7.0	14.3	chr11	100807496	100807531	(34279091)	C	MIRc	SINE/MIR	(62)	206	180	725543
2361	9.9	0.3	0.3	chr11	102024946	102025249	(33061373)	+	AluSz	SINE/Alu	1	304	(8)	727225
12811	17.1	4.9	14.1	chr11	102072603	102074599	(33012023)	C	L1M2	LINE/L1	(3890)	2593	719	727321
2426	11.6	2.2	1.6	chr11	102195471	102195837	(32890785)	+	THE1C	LTR/ERVL-MaLR	7	375	(0)	727545
3403	16.8	2.3	9.0	chr11	102195946	102196742	(32889880)	+	L1MB7	LINE/L1	5398	6139	(45)	727546
2146	13.6	8.5	0.6	chr11	102431731	102432078	(32654544)	+	THE1D	LTR/ERVL-MaLR	1	378	(3)	727928
11020	10.2	4.0	4.2	chr11	102432082	102433664	(32652958)	+	THE1-int	LTR/ERVL-MaLR	1	1580	(0)	727929
3390	16.6	5.8	0.1	chr11	103373436	103374141	(31712481)	C	L1MA6	LINE/L1	(3230)	4332	3585	729360
1262	12.5	2.4	2.4	chr11	103374142	103374346	(31712276)	+	THE1D	LTR/ERVL-MaLR	1	205	(170)	729365
455	13.4	0.0	0.0	chr11	103374349	103374415	(31712207)	+	THE1D	LTR/ERVL-MaLR	362	428	(0)	729365
10051	11.3	4.6	0.4	chr11	103374416	103375929	(31710693)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	729365
10285	12.6	5.7	0.3	chr11	103723834	103725374	(31361248)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	729870
1440	19.2	5.5	2.9	chr11	103725388	103725703	(31360919)	C	THE1D	LTR/ERVL-MaLR	(1)	380	56	729870
9352	15.1	2.3	3.8	chr11	105129906	105131560	(29955062)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	731780
770	15.9	3.3	0.0	chr11	105131563	105131707	(29954915)	C	THE1D	LTR/ERVL-MaLR	(0)	381	232	731780
494	25.8	7.8	0.0	chr11	105131723	105131871	(29954751)	C	L1M5	LINE/L1	(627)	5535	5376	731781
2447	17.9	1.2	2.9	chr11	106528745	106529233	(28557389)	+	LTR27B	LTR/ERV1	1	481	(113)	733690
11727	9.3	0.2	0.4	chr11	109714049	109715631	(25370991)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	738692
2009	12.3	6.6	2.9	chr11	109715632	109715981	(25370641)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	738692
314	21.9	2.4	4.7	chr11	110371244	110371329	(24715293)	+	MLT1J1	LTR/ERVL-MaLR	69	152	(292)	739747
12	12.6	2.5	7.3	chr11	110371411	110371450	(24715172)	+	G-rich	Low_complexity	1	41	(0)	739748
346	33.2	7.0	1.4	chr11	110371572	110371741	(24714881)	C	L1MEd	LINE/L1	(2272)	235	52	739742
2192	13.8	4.8	2.3	chr11	110440896	110441243	(24645379)	+	THE1B	LTR/ERVL-MaLR	6	362	(2)	739841
12064	8.4	1.1	0.1	chr11	110441246	110442810	(24643812)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	739841
13	22.4	2.3	2.2	chr11	110927541	110927584	(24159038)	+	(GTTT)n	Simple_repeat	1	45	(0)	740569
1305	23.6	7.3	1.2	chr11	113012447	113012867	(22073755)	C	MLT1C	LTR/ERVL-MaLR	(12)	455	7	743972
2138	13.3	14.8	0.0	chr11	113664738	113665105	(21421517)	+	LTR47A2	LTR/ERVL	1	432	(0)	744951
3936	16.4	1.8	2.2	chr11	113665106	113665121	(21421501)	C	L1MB7	LINE/L1	(143)	6539	6529	744950
2735	14.7	9.7	0.2	chr11	113665122	113665578	(21421044)	+	LTR10B	LTR/ERV1	1	505	(0)	744952
1563	21.8	2.5	1.7	chr11	115056301	115056660	(20029962)	+	MLT1A0	LTR/ERVL-MaLR	3	365	(0)	747110
7581	21.5	5.8	4.4	chr11	115056661	115058370	(20028252)	+	MLT1A0-int	LTR/ERVL-MaLR	1	1735	(0)	747110
1348	16.0	1.3	1.8	chr11	115252984	115253212	(19833410)	C	MER30	DNA/hAT-Charlie	(0)	230	3	747390
1762	22.2	9.7	5.4	chr11	116440180	116440659	(18645963)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	749317
1352	24.5	1.5	6.3	chr11	116440749	116441158	(18645464)	C	MLT2C1	LTR/ERVL	(7)	390	1	749318
752	33.8	13.7	4.4	chr11	116749190	116750320	(18336302)	C	L2c	LINE/L2	(0)	3387	2088	749874
367	30.3	10.2	0.9	chr11	116750321	116750543	(18336079)	+	L2c	LINE/L2	1824	2069	(1350)	749875
584	32.7	8.8	5.4	chr11	116750596	116751288	(18335334)	+	L2c	LINE/L2	2651	3377	(10)	749875
3685	7.1	0.4	0.0	chr11	117405619	117406113	(17680509)	C	THE1A-int	LTR/ERVL-MaLR	(1083)	497	1	751108
2392	11.6	0.8	3.3	chr11	117406114	117406477	(17680145)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	751108
1034	22.4	0.0	0.0	chr11	120617370	120617570	(14469052)	C	AluJb	SINE/Alu	(2)	310	110	756862
1855	14.8	9.8	0.6	chr11	120617580	120617912	(14468710)	+	MSTA	LTR/ERVL-MaLR	60	426	(2)	756863
9445	15.1	2.3	0.4	chr11	120617915	120619514	(14467108)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	756863
2377	15.1	0.3	0.3	chr11	121122131	121122495	(13964127)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	757675
940	14.8	0.6	3.0	chr11	121122498	121122555	(13964067)	+	MLT1A0-int	LTR/ERVL-MaLR	2	60	(1675)	757675
1813	15.4	0.0	5.5	chr11	121122556	121122867	(13963755)	+	AluJb	SINE/Alu	3	297	(15)	757676
197	25.5	0.0	0.0	chr11	123227961	123228007	(11858615)	C	L3b	LINE/CR1	(251)	4981	4935	761126
519	22.6	13.8	2.9	chr11	123228180	123228384	(11858238)	C	MIRc	SINE/MIR	(15)	253	23	761127
3655	20.2	0.9	0.0	chr11	123761968	123762655	(11323967)	C	MSTB-int	LTR/ERVL-MaLR	(957)	694	1	762118
2724	16.1	2.4	0.2	chr11	123762656	123763072	(11323550)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	762118
13	8.5	4.0	0.0	chr11	125082993	125083017	(10003605)	+	(CAGCC)n	Simple_repeat	1	26	(0)	763959
13	18.0	0.0	7.0	chr11	125405102	125405144	(9681478)	+	(CCCA)n	Simple_repeat	1	43	(0)	764450
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
3680	11.6	4.1	0.6	chr11	125685330	125685868	(9400754)	+	LTR6A	LTR/ERV1	6	564	(0)	764970
551	24.2	3.0	0.0	chr11	126102033	126102160	(8984462)	+	MIR	SINE/MIR	9	140	(122)	765515
5926	26.0	6.7	1.6	chr11	128088534	128090178	(6996444)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	1	768437
711	22.2	0.7	1.4	chr11	128090188	128090333	(6996289)	C	MLT1A0	LTR/ERVL-MaLR	(12)	396	252	768437
867	28.6	9.9	6.8	chr11	128090334	128091741	(6994881)	C	L1MEc	LINE/L1	(2820)	3499	2028	768435
307	28.8	2.5	0.8	chr11	128265986	128266104	(6820518)	C	MLT1K	LTR/ERVL-MaLR	(15)	580	460	768674
36	4.9	0.0	0.0	chr11	128521732	128521773	(6564849)	+	(TCC)n	Simple_repeat	1	42	(0)	769016
19	0.0	0.0	0.0	chr11	131669185	131669205	(3417417)	+	(AG)n	Simple_repeat	1	21	(0)	773635
2596	7.2	2.0	0.6	chr11	132508510	132508859	(2577763)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	774693
11228	10.8	0.7	0.3	chr11	132508860	132510432	(2576190)	+	THE1A-int	LTR/ERVL-MaLR	1	1579	(1)	774693
2207	15.2	9.2	0.3	chr11	133281185	133281572	(1805050)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	775729
8371	18.9	5.0	1.3	chr11	133281575	133283162	(1803460)	+	MSTB-int	LTR/ERVL-MaLR	2	1651	(0)	775729
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
2210	8.1	1.0	1.0	chr12	1548746	1549055	(131726254)	+	AluY	SINE/Alu	2	311	(0)	780851
2046	12.1	9.6	6.5	chr12	1549056	1549115	(131726194)	+	MSTA	LTR/ERVL-MaLR	391	428	(0)	780850
10453	11.2	3.9	0.9	chr12	1549116	1549601	(131725708)	+	MSTA-int	LTR/ERVL-MaLR	1	483	(1148)	780850
327	34.1	1.5	0.8	chr12	2256139	2256271	(131019038)	+	MER5A	DNA/hAT-Charlie	51	184	(5)	781931
447	23.8	9.5	4.4	chr12	4198234	4198413	(129076896)	+	LTR90A	LTR	787	976	(0)	785148
329	29.1	4.2	1.2	chr12	4198429	4198588	(129076721)	C	MIR3	SINE/MIR	(8)	200	36	785149
188	32.4	1.4	0.0	chr12	6155050	6155117	(127120192)	C	MIRb	SINE/MIR	(138)	130	62	788125
16	15.1	6.8	0.0	chr12	6764153	6764196	(126511113)	+	(CCCACAG)n	Simple_repeat	1	47	(0)	789347
10307	11.2	6.1	0.5	chr12	10233841	10235377	(123039932)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	794969
241	20.0	0.0	12.2	chr12	10645660	10645733	(122629576)	+	MER5B	DNA/hAT-Charlie	2	66	(112)	795469
2254	12.7	4.7	2.5	chr12	10645743	10646098	(122629211)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	795470
11563	10.2	0.6	0.0	chr12	10646099	10647668	(122627641)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	795470
685	24.7	1.1	7.1	chr12	10742869	10743064	(122532245)	+	MER5A	DNA/hAT-Charlie	6	189	(0)	795611
11283	10.4	0.6	0.6	chr12	10754840	10756415	(122518894)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	795628
2095	12.6	6.3	1.4	chr12	10756416	10756761	(122518548)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	795628
16	20.1	0.0	4.1	chr12	12562056	12562104	(120713205)	+	(GCGCCCC)n	Simple_repeat	1	49	(0)	798341
14	14.1	7.7	0.0	chr12	12562240	12562278	(120713031)	+	(CGCTCC)n	Simple_repeat	1	42	(0)	798342
10174	14.8	2.0	0.2	chr12	12647569	12649171	(120626138)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	798501
1993	14.1	14.0	1.3	chr12	12649172	12649544	(120625765)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	798501
2399	9.4	0.3	0.0	chr12	12902786	12903094	(120372215)	+	AluSp	SINE/Alu	1	310	(3)	799036
781	22.7	10.3	4.2	chr12	12903095	12903258	(120372051)	+	L1MC5	LINE/L1	9096	9255	(49)	799034
1720	16.4	0.0	4.7	chr12	12903270	12903586	(120371723)	C	AluJo	SINE/Alu	(10)	302	1	799037
1839	8.3	0.8	0.0	chr12	13219309	13219561	(120055748)	C	THE1D-int	LTR/ERVL-MaLR	(1376)	255	1	799542
556	10.3	0.0	0.0	chr12	13219562	13219639	(120055670)	C	THE1D	LTR/ERVL-MaLR	(0)	381	304	799542
270	25.9	3.6	1.2	chr12	13219767	13219848	(120055461)	C	Tigger16b	DNA/TcMar-Tigger	(7)	329	246	799543
226	28.7	0.0	4.4	chr12	13219832	13219922	(120055387)	+	Tigger16a	DNA/TcMar-Tigger	770	856	(101)	799544
12	19.6	2.9	0.0	chr12	13729819	13729853	(119545456)	+	G-rich	Low_complexity	1	36	(0)	800235
16	0.0	0.0	0.0	chr12	13729984	13730000	(119545309)	+	(T)n	Simple_repeat	1	17	(0)	800236
769	21.6	11.9	5.1	chr12	13745910	13746182	(119529127)	C	L2a	LINE/L2	(5)	3421	3128	800259
193	24.7	18.9	0.0	chr12	13746186	13746258	(119529051)	+	MIRb	SINE/MIR	171	260	(8)	800260
2418	15.2	4.7	0.2	chr12	13746628	13747035	(119528274)	+	MSTB1	LTR/ERVL-MaLR	1	427	(5)	800261
29	14.2	3.8	6.1	chr12	14331637	14331716	(118943593)	+	(AT)n	Simple_repeat	1	78	(0)	801209
436	7.0	0.0	1.7	chr12	14331727	14331774	(118943535)	+	Ricksha_c	DNA/MULE-MuDR	858	904	(1144)	801210
14668	8.1	1.2	0.7	chr12	14331775	14332771	(118942538)	+	HERVL-int	LTR/ERVL	1	1005	(4649)	801211
2050	14.7	3.0	2.5	chr12	14759689	14760050	(118515259)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	801879
9982	10.9	2.1	2.8	chr12	14760052	14761641	(118513668)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	801879
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
2329	12.2	3.1	0.0	chr12	17441797	17442140	(115833169)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	805519
8824	12.4	10.4	0.1	chr12	17442141	17443556	(115831753)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	805519
213	37.9	1.7	0.8	chr12	18374447	18374563	(114900746)	C	MIR3	SINE/MIR	(46)	162	45	806556
2050	16.1	9.0	0.3	chr12	18374660	18375045	(114900264)	+	MSTA	LTR/ERVL-MaLR	2	424	(4)	806557
8398	17.9	5.2	0.6	chr12	18375050	18376623	(114898686)	+	MSTA-int	LTR/ERVL-MaLR	1	1650	(1)	806557
2331	11.3	3.5	1.1	chr12	20659978	20660343	(112614966)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	809949
986	11.8	1.3	0.0	chr12	20660344	20660495	(112614814)	+	THE1C-int	LTR/ERVL-MaLR	1	154	(1426)	809949
1940	14.8	5.0	3.9	chr12	20660504	20660861	(112614448)	+	THE1C	LTR/ERVL-MaLR	3	364	(0)	809949
8589	11.3	0.2	0.4	chr12	20660862	20662074	(112613235)	+	THE1C-int	LTR/ERVL-MaLR	1	1211	(369)	809949
403	32.1	6.2	3.5	chr12	22250185	22250387	(111024922)	+	MIR	SINE/MIR	43	251	(11)	811857
1965	21.1	6.5	4.4	chr12	22317315	22317854	(110957455)	C	MLT1F2	LTR/ERVL-MaLR	(7)	553	2	811951
12	19.6	0.0	0.0	chr12	24561719	24561747	(108713562)	+	G-rich	Low_complexity	1	29	(0)	815077
4868	17.0	3.5	0.8	chr12	24609488	24610825	(108664484)	C	L1MA4	LINE/L1	(9)	6291	4908	815159
1601	15.4	6.0	4.2	chr12	27242659	27242796	(106032513)	+	Charlie4a	DNA/hAT-Charlie	335	465	(43)	819251
921	26.0	13.8	3.0	chr12	27547518	27547921	(105727388)	C	LTR16A1	LTR/ERVL	(1)	455	1	819733
12	13.6	7.0	2.2	chr12	27552656	27552684	(105722625)	+	(CATAACT)n	Simple_repeat	1	32	(0)	819742
2792	11.3	11.4	0.0	chr12	27552685	27553110	(105722199)	C	MER31A	LTR/ERV1	(1)	484	4	819743
12	13.6	7.0	2.2	chr12	27553111	27553123	(105722186)	+	(CATAACT)n	Simple_repeat	5	16	(0)	819744
10546	12.9	1.2	0.4	chr12	28369035	28370651	(104904658)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	2	820969
2162	13.2	4.2	1.1	chr12	28370653	28371021	(104904288)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	820969
2596	20.1	6.8	3.2	chr12	41694455	41694937	(91580372)	+	L1MB3	LINE/L1	4741	5244	(896)	835377
2766	13.2	12.7	0.2	chr12	41694938	41695400	(91579909)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	835378
10432	11.3	2.1	2.6	chr12	43181627	43183214	(90092095)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	837726
2791	8.5	0.0	1.1	chr12	43183215	43183593	(90091716)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	837726
726	21.5	11.7	1.8	chr12	45552852	45553074	(87722235)	+	LTR16E1	LTR/ERVL	287	534	(4)	840974
778	30.1	5.8	0.3	chr12	46465018	46465344	(86809965)	+	MLT1J-int	LTR/ERVL-MaLR	1	346	(1041)	842321
11627	8.6	2.1	0.3	chr12	48719432	48720983	(84554326)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	845631
2055	11.8	7.2	4.0	chr12	48720984	48721335	(84553974)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	845631
331	30.7	10.8	5.7	chr12	49945503	49945923	(83329386)	C	LTR85c	LTR/Gypsy?	(218)	605	161	848122
20	20.5	5.3	2.5	chr12	50185393	50185408	(83089901)	+	(AGCAGGA)n	Simple_repeat	1	38	(42)	848607
14	17.1	0.0	6.7	chr12	50185409	50185453	(83089856)	+	(GCAGGA)n	Simple_repeat	1	45	(0)	848608
20	20.5	5.3	2.5	chr12	50185454	50185468	(83089841)	+	(AGCAGGA)n	Simple_repeat	39	80	(0)	848607
203	33.6	8.9	0.9	chr12	51590369	51590482	(81684827)	C	MIRc	SINE/MIR	(45)	223	100	851611
1414	24.1	2.7	7.5	chr12	54622830	54623255	(78652054)	C	L1MC4	LINE/L1	(1081)	6961	6557	856749
11605	9.6	0.7	0.1	chr12	55569327	55570896	(77704413)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	857892
744	17.4	0.8	0.0	chr12	55920232	55920352	(77354957)	+	AluJr4	SINE/Alu	12	133	(179)	858538
2243	12.3	0.7	0.0	chr12	55920357	55920665	(77354644)	+	AluSz	SINE/Alu	1	311	(1)	858539
414	30.7	6.9	2.4	chr12	55920666	55920955	(77354354)	+	L1ME4a	LINE/L1	5658	5961	(163)	858540
5078	14.5	2.1	1.4	chr12	56761564	56762252	(76513057)	+	L1MB7	LINE/L1	5489	6184	(0)	860204
16	0.0	0.0	0.0	chr12	56762256	56762273	(76513036)	+	(AT)n	Simple_repeat	1	18	(0)	860206
43	0.0	0.0	0.0	chr12	56762274	56762310	(76512999)	+	(AC)n	Simple_repeat	1	37	(0)	860207
1781	15.0	3.5	0.4	chr12	56762505	56762621	(76512688)	+	AluJb	SINE/Alu	1	117	(195)	860208
31	2.8	2.7	0.0	chr12	56762622	56762658	(76512651)	+	(ACAA)n	Simple_repeat	1	38	(0)	860209
1781	15.0	3.5	0.4	chr12	56762659	56762814	(76512495)	+	AluJb	SINE/Alu	118	283	(29)	860208
2221	13.9	13.8	0.5	chr12	56885156	56885524	(76389785)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	860428
11379	13.9	0.3	1.9	chr12	56885526	56887183	(76388126)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	860428
20	19.4	3.8	0.0	chr12	56955605	56955657	(76319652)	+	GA-rich	Low_complexity	1	55	(0)	860500
1823	15.0	1.3	5.1	chr12	57441379	57441544	(75833765)	+	AluSq2	SINE/Alu	137	302	(11)	861327
1813	21.6	5.6	6.0	chr12	57441545	57441603	(75833706)	C	MLT1H2-int	LTR/ERVL-MaLR	(1350)	59	2	861323
2115	21.1	7.0	2.6	chr12	57441605	57441682	(75833627)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	408	861323
2182	12.4	0.3	0.0	chr12	57441683	57441980	(75833329)	C	AluSx1	SINE/Alu	(13)	299	1	861329
2296	24.6	4.6	5.3	chr12	59251082	59252063	(74023246)	+	Charlie2b	DNA/hAT-Charlie	1776	2750	(32)	863864
10711	13.9	0.6	0.3	chr12	59252227	59253853	(74021456)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	863865
9382	13.6	4.3	1.1	chr12	59611514	59613042	(73662267)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	864320
2428	12.7	1.1	0.0	chr12	59613043	59613413	(73661896)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	864320
462	34.6	7.8	2.4	chr12	59818372	59819057	(73456252)	+	L2a	LINE/L2	2618	3414	(12)	864578
13389	10.8	2.2	2.4	chr12	61262290	61264134	(72011175)	+	L1PA10	LINE/L1	3042	4899	(1247)	866321
2092	14.3	2.2	2.5	chr12	61264135	61264499	(72010810)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	866323
11369	10.4	0.2	0.3	chr12	61264500	61266080	(72009229)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	866323
1469	22.7	8.4	3.4	chr12	62040292	62040733	(71234576)	+	MLT1C	LTR/ERVL-MaLR	1	466	(1)	867344
2458	9.2	0.0	1.3	chr12	62513665	62513979	(70761330)	+	AluY	SINE/Alu	1	311	(0)	868048
11456	8.2	1.6	2.8	chr12	62513980	62514345	(70760964)	C	THE1B-int	LTR/ERVL-MaLR	(1213)	367	1	868046
2049	13.3	7.2	2.0	chr12	62514346	62514689	(70760620)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	868046
748	23.4	19.9	3.8	chr12	62813482	62813846	(70461463)	+	Charlie7	DNA/hAT-Charlie	288	725	(1887)	868524
1861	12.0	5.8	15.1	chr12	63178403	63178806	(70096503)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	869085
11112	10.2	2.4	0.1	chr12	63178807	63180350	(70094959)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	869085
2389	11.6	0.3	0.0	chr12	64222943	64223243	(69052066)	C	AluSz	SINE/Alu	(10)	302	1	870686
2336	16.3	3.5	0.7	chr12	64633253	64633666	(68641643)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	871518
1151	11.3	2.6	0.5	chr12	64633667	64633853	(68641456)	+	MSTB-int	LTR/ERVL-MaLR	1	191	(1460)	871518
1732	18.0	1.7	0.0	chr12	64633854	64634147	(68641162)	+	AluJb	SINE/Alu	1	299	(13)	871519
220	35.1	1.5	3.0	chr12	65534624	65534758	(67740551)	+	MIR3	SINE/MIR	20	152	(56)	872930
190	36.3	2.1	1.1	chr12	65802295	65802386	(67472923)	+	L2a	LINE/L2	2930	3022	(404)	873367
2376	9.5	0.0	0.0	chr12	66759859	66760152	(66515157)	C	AluY	SINE/Alu	(16)	295	2	874849
11447	9.3	1.3	0.9	chr12	66760153	66760336	(66514973)	C	THE1A-int	LTR/ERVL-MaLR	(1393)	187	3	874848
2473	11.1	0.8	1.1	chr12	66760338	66760693	(66514616)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	874848
8576	17.6	1.4	5.2	chr12	68064825	68068023	(65207286)	C	L1PA17	LINE/L1	(2354)	4561	1509	876808
744	30.6	2.8	4.5	chr12	68068061	68068348	(65206961)	C	L1PA17	LINE/L1	(6013)	1202	920	876808
1347	24.1	0.0	5.2	chr12	68068408	68068713	(65206596)	C	L1PA17	LINE/L1	(6120)	799	510	876808
11708	9.8	1.1	0.9	chr12	68442340	68443915	(64831394)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	877395
2709	8.8	0.6	0.0	chr12	68443916	68444268	(64831041)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	877395
4816	15.4	3.2	2.5	chr12	68444269	68445495	(64829814)	+	L1MA5A	LINE/L1	4300	5525	(772)	877394
460	26.0	7.1	1.2	chr12	69918025	69918195	(63357114)	+	MER102b	DNA/hAT-Charlie	4	185	(156)	880094
588	24.1	9.6	2.1	chr12	69918563	69918803	(63356506)	C	L1ME3Cz	LINE/L1	(698)	299	79	880095
13763	18.2	2.1	1.5	chr12	70008588	70009948	(63265361)	+	L1M2	LINE/L1	3066	4460	(3102)	880249
9494	14.4	4.7	0.5	chr12	72699158	72700715	(60574594)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1629	3	884129
2451	13.3	0.6	0.3	chr12	72700718	72701080	(60574229)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	884129
10694	11.9	0.9	0.4	chr12	72951511	72953074	(60322235)	C	THE1B-int	LTR/ERVL-MaLR	(8)	1572	1	884426
1905	14.6	5.2	2.6	chr12	72953077	72953428	(60321881)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	884426
1002	24.8	10.4	1.5	chr12	73853991	73854314	(59420995)	C	MSTC-int	LTR/ERVL-MaLR	(1378)	357	2	885478
367	23.8	8.7	0.0	chr12	73854317	73854421	(59420888)	C	MSTC	LTR/ERVL-MaLR	(0)	428	314	885478
2863	13.2	1.7	0.0	chr12	74244895	74245683	(59029626)	C	THE1C-int	LTR/ERVL-MaLR	(745)	835	1	885977
2419	13.2	1.3	0.0	chr12	74245684	74246053	(59029256)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	885977
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
8395	16.8	5.9	1.0	chr12	76517993	76519560	(56755749)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	2	889365
2322	14.7	4.2	0.5	chr12	76519562	76519971	(56755338)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	889365
20217	5.7	0.6	0.0	chr12	77260480	77264547	(56010762)	C	L1P1	LINE/L1	(1474)	4672	580	890616
715	8.0	0.0	0.0	chr12	77264517	77264604	(56010705)	C	L1P1	LINE/L1	(6057)	98	11	890616
248	9.8	6.8	0.0	chr12	77264612	77264652	(56010657)	C	THE1B-int	LTR/ERVL-MaLR	(1536)	44	1	890615
2044	14.5	5.0	2.5	chr12	77264655	77265007	(56010302)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	890615
10483	12.1	0.4	2.9	chr12	78112731	78114350	(55160959)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	891727
2305	10.3	3.3	2.0	chr12	78114363	78114720	(55160589)	C	THE1C	LTR/ERVL-MaLR	(12)	363	1	891727
700	26.8	4.6	7.5	chr12	78114847	78115230	(55160079)	C	Charlie7	DNA/hAT-Charlie	(1874)	738	367	891728
284	7.1	4.5	0.0	chr12	78115291	78115332	(55159977)	C	THE1B-int	LTR/ERVL-MaLR	(1536)	44	1	891729
245	11.8	0.0	0.0	chr12	78115333	78115366	(55159943)	C	THE1B	LTR/ERVL-MaLR	(0)	364	331	891729
252	39.0	4.2	2.4	chr12	78115368	78115580	(55159729)	C	Charlie7	DNA/hAT-Charlie	(2304)	308	92	891728
2451	13.3	0.6	0.3	chr12	78277175	78277537	(54997772)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	891929
9822	11.4	4.8	0.9	chr12	78277538	78279056	(54996253)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	891929
2175	12.2	3.0	2.8	chr12	81590523	81590885	(51684424)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	896622
11005	9.9	2.6	0.0	chr12	81590886	81592424	(51682885)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	896622
2099	16.5	9.1	1.0	chr12	81693216	81693600	(51581709)	+	MSTA	LTR/ERVL-MaLR	10	428	(0)	896743
8393	18.3	2.5	1.5	chr12	81693601	81695234	(51580075)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	896743
1882	16.0	1.0	0.0	chr12	84151214	84151520	(49123789)	C	L1PA16	LINE/L1	(2269)	3877	3568	899915
7774	14.9	4.9	2.4	chr12	84151521	84153718	(49121591)	+	L1PA16	LINE/L1	3906	6156	(10)	899915
1991	13.8	10.4	1.5	chr12	85658353	85658683	(47616626)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	901934
11110	10.5	0.7	2.3	chr12	85658685	85659060	(47616249)	+	THE1B-int	LTR/ERVL-MaLR	2	363	(1217)	901934
4487	8.3	0.9	0.6	chr12	86710548	86711190	(46564119)	+	L1PB2	LINE/L1	5505	6149	(2)	903309
312	31.5	2.6	1.8	chr12	86711352	86711464	(46563845)	C	LTR16A1	LTR/ERVL	(342)	114	1	903310
2348	13.2	2.4	0.8	chr12	89090200	89090567	(44184742)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	906453
9689	11.7	6.4	1.4	chr12	89090569	89090957	(44184352)	+	THE1C-int	LTR/ERVL-MaLR	1	437	(1143)	906453
3275	7.5	0.0	3.9	chr12	90434294	90434750	(42840559)	+	MLT2A1	LTR/ERVL	6	444	(0)	908532
7371	13.6	1.4	0.8	chr12	90434751	90436409	(42838900)	+	HERVL-int	LTR/ERVL	1	1747	(3907)	908532
9508	14.3	2.9	0.8	chr12	90565717	90567263	(42708046)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	908721
1625	18.2	6.0	3.2	chr12	90567264	90567633	(42707676)	C	THE1C	LTR/ERVL-MaLR	(0)	381	1	908721
629	22.2	11.0	0.6	chr12	92760887	92761185	(40514124)	C	MLT1A	LTR/ERVL-MaLR	(16)	374	14	912081
2336	10.9	6.3	1.9	chr12	93632178	93632541	(39642768)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	913854
4810	7.2	0.7	0.0	chr12	93632559	93633159	(39642150)	+	THE1D-int	LTR/ERVL-MaLR	1027	1631	(0)	913854
1781	17.5	12.7	0.5	chr12	94718100	94718473	(38556836)	C	MER57C2	LTR/ERV1	(1)	433	8	915696
556	14.3	6.2	1.9	chr12	94718478	94718584	(38556725)	C	L1MC5	LINE/L1	(349)	8955	8844	915695
2047	12.8	6.0	1.9	chr12	96086003	96086367	(37188942)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	918409
11577	9.9	0.5	6.5	chr12	96086368	96086877	(37188432)	+	THE1D-int	LTR/ERVL-MaLR	1	409	(1222)	918409
2373	11.2	0.8	0.8	chr12	101505600	101505950	(31769359)	+	THE1A	LTR/ERVL-MaLR	5	355	(0)	927463
11490	9.7	0.8	1.0	chr12	101505951	101507533	(31767776)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	927463
445	33.2	5.1	3.6	chr12	102730757	102731009	(30544300)	+	L1M6	LINE/L1	105	361	(6135)	929506
293	24.8	2.7	3.3	chr12	103640318	103640432	(29634877)	+	L2c	LINE/L2	3258	3370	(5)	930993
1284	9.4	0.0	0.0	chr12	104717798	104717957	(28557352)	+	AluSg4	SINE/Alu	129	288	(22)	933164
12	9.3	0.0	4.0	chr12	104717958	104717982	(28557327)	+	(TTAA)n	Simple_repeat	1	25	(0)	933165
941	27.4	3.8	3.4	chr12	104718090	104718350	(28556959)	C	MIR	SINE/MIR	(8)	254	1	933166
8548	10.9	8.5	19.1	chr12	105438397	105440239	(27835070)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	934375
1934	11.1	10.0	2.6	chr12	105440242	105440592	(27834717)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	934375
10064	15.7	3.4	1.4	chr12	106541870	106542325	(26732984)	C	MSTB-int	LTR/ERVL-MaLR	(1189)	462	1	936393
2836	15.0	1.6	0.7	chr12	106542326	106542747	(26732562)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	936393
539	23.4	13.1	1.7	chr12	107081400	107081636	(26193673)	+	L2a	LINE/L2	3069	3412	(14)	937381
690	19.9	1.4	0.0	chr12	107081711	107081846	(26193463)	+	MLT1A0	LTR/ERVL-MaLR	1	138	(227)	937382
525	20.4	7.2	0.0	chr12	107081847	107081949	(26193360)	+	MSTA1	LTR/ERVL-MaLR	1	111	(354)	937383
320	22.4	2.9	0.0	chr12	107081959	107082025	(26193284)	+	MST-int	LTR/ERVL-MaLR	2	70	(1561)	937384
20669	7.5	1.5	0.2	chr12	107082036	107085835	(26189474)	+	L1PA8	LINE/L1	2325	6168	(4)	937385
11612	7.9	4.2	0.3	chr12	111373054	111373454	(21901855)	C	THE1A-int	LTR/ERVL-MaLR	(1134)	446	2	946927
348	18.3	0.0	0.0	chr12	111373455	111373514	(21901795)	C	THE1A	LTR/ERVL-MaLR	(0)	355	296	946927
1812	8.4	1.7	1.7	chr12	111373516	111373754	(21901555)	C	AluSx1	SINE/Alu	(7)	305	67	946929
21	24.2	0.0	6.8	chr12	113335143	113335230	(19940079)	+	(CCCGC)n	Simple_repeat	1	88	(0)	951315
1694	17.9	1.0	1.7	chr12	113335558	113335859	(19939450)	C	AluJb	SINE/Alu	(2)	310	11	951316
232	31.1	3.6	3.6	chr12	117671579	117671688	(15603621)	+	L2c	LINE/L2	3260	3369	(18)	960828
33	16.5	1.1	6.5	chr12	117968829	117968920	(15306389)	+	(TGC)n	Simple_repeat	1	93	(0)	961512
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
12	5.5	0.0	0.0	chr12	117969131	117969149	(15306160)	+	(GGA)n	Simple_repeat	1	19	(0)	961514
19	21.7	1.8	1.8	chr12	117969235	117969289	(15306020)	+	(GCGA)n	Simple_repeat	1	56	(0)	961515
30	19.5	2.8	1.4	chr12	117969563	117969652	(15305657)	+	(GT)n	Simple_repeat	1	91	(0)	961516
335	32.5	7.8	3.0	chr12	120800541	120800835	(12474474)	+	L4_A_Mam	LINE/RTE-X	3206	3515	(1475)	967879
289	25.8	7.9	0.0	chr12	120800841	120800933	(12474376)	C	MIRb	SINE/MIR	(1)	267	167	967882
2891	15.4	3.4	2.4	chr12	120800982	120801565	(12473744)	+	LTR49	LTR/ERV1	1	590	(5)	967883
774	26.4	13.8	4.8	chr12	121436633	121437665	(11837644)	+	L1MEj	LINE/L1	923	2437	(70)	969390
1520	22.6	9.7	0.9	chr12	124243085	124243509	(9031800)	+	MLT1C	LTR/ERVL-MaLR	2	467	(0)	975745
187	35.7	3.4	2.5	chr12	124243510	124243621	(9031688)	C	Tigger19a	DNA/TcMar-Tigger	(33)	290	177	975746
11866	9.2	2.5	0.3	chr12	127966766	127968310	(5306999)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	982361
2418	11.2	4.7	2.2	chr12	127968311	127968665	(5306644)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	982361
304	31.4	5.5	0.0	chr12	128722263	128722418	(4552891)	C	MamGypLTR1d	LTR/Gypsy	(17)	796	632	983726
541	22.3	3.7	0.0	chr12	129055205	129055334	(4219975)	+	MER20	DNA/hAT-Charlie	80	214	(5)	984407
234	27.7	6.0	0.0	chr12	129055637	129055730	(4219579)	C	MLT1N2	LTR/ERVL-MaLR	(2)	560	461	984408
25389	4.5	0.1	0.4	chr12	129055882	129062051	(4213258)	C	L1PA4	LINE/L1	(1)	6154	3	984409
1605	29.5	10.2	0.6	chr12	130726790	130727502	(2547807)	C	Arthur1	DNA/hAT-Tip100	(3156)	791	2	987114
1912	18.3	0.8	1.9	chr12	130923331	130923698	(2351611)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	987480
352	32.3	3.0	5.9	chr12	130923772	130923830	(2351479)	+	MER102b	DNA/hAT-Charlie	3	59	(282)	987481
2342	10.6	0.0	0.3	chr12	130923831	130924142	(2351167)	C	AluSx1	SINE/Alu	(1)	311	1	987482
2065	8.2	4.3	0.4	chr12	131123040	131123344	(2151965)	C	AluSx	SINE/Alu	(0)	312	1	987750
6088	18.0	2.5	2.1	chr12	131705258	131705964	(1569345)	+	L1M2a	LINE/L1	3433	4142	(3420)	988470
300	22.2	1.2	0.0	chr12	132415325	132415405	(859904)	C	MER5A1	DNA/hAT-Charlie	(80)	86	5	989423
492	32.2	7.2	2.9	chr12	132425424	132425807	(849502)	C	MLT1I-int	LTR/ERVL-MaLR	(170)	1217	816	989441
324	29.5	12.1	6.6	chr12	132519122	132519355	(755954)	C	L2b	LINE/L2	(14)	3373	3137	989557
2320	8.3	2.7	0.0	chr12	132519629	132519918	(755391)	+	AluSg7	SINE/Alu	1	298	(11)	989558
1897	25.0	9.8	4.7	chr13	19147718	19148782	(95215546)	C	MLT1D-int	LTR/ERVL-MaLR	(420)	1069	5	992025
1674	23.8	5.6	3.9	chr13	19148792	19149280	(95215048)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	1	992025
9705	12.1	6.0	1.5	chr13	21943930	21945436	(92418892)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	996870
2124	11.6	6.8	4.0	chr13	21945437	21945806	(92418522)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	996870
624	21.9	1.9	1.3	chr13	23503992	23504144	(90860184)	C	L1MCc	LINE/L1	(6246)	177	24	998950
212	33.3	14.9	3.4	chr13	23504152	23504387	(90859941)	C	MamSINE1	SINE/tRNA-RTE	(18)	272	5	998953
536	20.0	2.4	0.0	chr13	24142986	24143105	(90221223)	C	LTR16C	LTR/ERVL	(6)	483	361	999864
2376	12.2	0.0	0.0	chr13	24213263	24213564	(90150764)	C	AluSx4	SINE/Alu	(8)	302	1	999969
5741	23.6	2.1	1.7	chr13	26434917	26437366	(87926962)	+	L1MA5A	LINE/L1	64	2675	(4174)	1003260
2517	14.2	2.9	0.5	chr13	26934504	26934912	(87429416)	+	MSTB1	LTR/ERVL-MaLR	1	419	(13)	1004037
7846	20.1	4.3	2.7	chr13	26934919	26935123	(87429205)	+	MSTB1-int	LTR/ERVL-MaLR	1	208	(1443)	1004037
1540	19.4	0.0	2.2	chr13	26935124	26935401	(87428927)	+	AluJb	SINE/Alu	30	301	(11)	1004038
2491	11.2	0.0	0.0	chr13	28336743	28337047	(86027281)	C	AluSx	SINE/Alu	(7)	305	1	1006577
2357	28.0	5.3	3.3	chr13	29726105	29726603	(84637725)	C	MLT1G1-int	LTR/ERVL-MaLR	(890)	519	1	1008529
393	18.4	0.0	21.9	chr13	29726604	29726640	(84637688)	C	MLT1G1	LTR/ERVL-MaLR	(0)	489	454	1008529
2233	13.7	0.0	1.0	chr13	29726641	29726939	(84637389)	+	AluSz	SINE/Alu	1	296	(16)	1008532
2515	11.0	0.3	0.8	chr13	31314783	31315139	(83049189)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1011143
8902	10.7	3.2	7.1	chr13	31315144	31316433	(83047895)	+	THE1A-int	LTR/ERVL-MaLR	5	1303	(328)	1011143
11317	9.0	1.3	2.2	chr13	31478697	31479869	(82884459)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	428	1011369
10271	12.2	2.6	4.3	chr13	32373536	32374878	(81989450)	C	THE1D-int	LTR/ERVL-MaLR	(316)	1315	2	1012666
2174	11.3	6.9	1.1	chr13	32374879	32375235	(81989093)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	1012666
2854	10.2	0.8	1.1	chr13	32576813	32577188	(81787140)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1013039
10983	10.9	3.9	3.7	chr13	32577189	32578764	(81785564)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1013039
4987	9.5	3.7	1.1	chr13	33162231	33162933	(81201395)	C	THE1A-int	LTR/ERVL-MaLR	(857)	723	2	1013903
2529	9.4	0.8	0.8	chr13	33162935	33163289	(81201039)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1013903
1222	21.2	24.4	1.7	chr13	33345946	33346348	(81017980)	+	MLT1F2	LTR/ERVL-MaLR	1	500	(60)	1014173
2169	12.3	6.0	1.4	chr13	33947109	33947471	(80416857)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1015086
10041	12.2	5.7	3.4	chr13	33947474	33949063	(80415265)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	1015087
823	31.8	12.4	4.4	chr13	36834197	36834850	(77529478)	C	L1ME3G	LINE/L1	(136)	788	136	1019136
5886	22.7	4.8	4.4	chr13	38013542	38016164	(76348164)	C	L1MA8	LINE/L1	(4)	6287	3661	1020736
10520	19.1	1.9	1.9	chr13	38797877	38800642	(75563686)	C	L1M2	LINE/L1	(1897)	5665	2890	1021760
3388	16.3	2.5	8.3	chr13	38949912	38950646	(75413682)	C	LTR8	LTR/ERV1	(0)	691	1	1021943
1068	30.5	13.3	4.3	chr13	39155739	39156465	(75207863)	C	MLT1N2-int	LTR/ERVL-MaLR	(582)	805	3	1022230
2608	14.2	4.0	0.2	chr13	39555805	39556214	(74808114)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1022794
4870	18.1	8.9	1.4	chr13	39556215	39556681	(74807647)	+	MSTB-int	LTR/ERVL-MaLR	1	483	(1168)	1022794
16	0.0	0.0	0.0	chr13	44121369	44121385	(70242943)	+	(A)n	Simple_repeat	1	17	(0)	1029806
16	21.6	0.0	0.0	chr13	44436971	44437002	(69927326)	+	(C)n	Simple_repeat	1	32	(0)	1030298
1598	20.5	2.5	8.7	chr13	45767122	45767375	(68596953)	+	MER31B	LTR/ERV1	7	242	(224)	1032799
1717	17.9	0.7	1.3	chr13	45767376	45767677	(68596651)	C	AluJb	SINE/Alu	(12)	300	1	1032800
1598	20.5	2.5	8.7	chr13	45767678	45767893	(68596435)	+	MER31B	LTR/ERV1	243	447	(19)	1032799
12521	9.1	1.0	0.8	chr13	47872644	47874219	(66490109)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1035883
2002	15.4	5.6	3.4	chr13	47874220	47874568	(66489760)	C	THE1B	LTR/ERVL-MaLR	(0)	364	8	1035883
11162	12.2	3.9	0.9	chr13	48825701	48827281	(65537047)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1037402
2027	14.4	12.1	0.8	chr13	48827285	48827656	(65536672)	C	MSTA	LTR/ERVL-MaLR	(3)	425	6	1037402
2456	4.9	0.7	3.3	chr13	49445647	49445952	(64918376)	+	AluSx1	SINE/Alu	1	298	(14)	1038414
632	10.3	14.5	3.5	chr13	49445958	49446073	(64918255)	+	FLAM_C	SINE/Alu	1	131	(12)	1038415
350	16.2	0.0	1.4	chr13	49446093	49446161	(64918167)	+	L1M5	LINE/L1	5540	5607	(517)	1038416
3222	20.0	5.9	2.6	chr13	50536276	50536543	(63827785)	C	L1M2c	LINE/L1	(5153)	1636	1357	1040263
1308	33.2	4.0	2.8	chr13	50536708	50537321	(63827007)	C	L1M2c	LINE/L1	(6159)	630	9	1040263
665	24.6	9.5	8.7	chr13	50636108	50636419	(63727909)	+	LTR105_Mam	LTR/ERVL	1	315	(285)	1040418
277	36.1	9.7	0.0	chr13	50636696	50636825	(63727503)	C	MIR3	SINE/MIR	(63)	145	2	1040419
364	16.5	1.2	13.2	chr13	52095845	52095860	(62268468)	+	AluJb	SINE/Alu	203	218	(84)	1042563
1865	14.2	15.9	0.8	chr13	52095861	52096223	(62268105)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1042564
10245	14.4	2.3	0.2	chr13	52096228	52097819	(62266509)	+	MSTA-int	LTR/ERVL-MaLR	5	1631	(0)	1042565
3249	20.4	3.7	1.6	chr13	54432095	54432730	(59931598)	+	MER54B	LTR/ERVL	1	650	(143)	1045889
10883	11.4	0.9	0.2	chr13	55890781	55892346	(58471982)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	2	1047708
1752	17.4	6.6	2.0	chr13	55892348	55892694	(58471634)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1047708
10025	12.9	2.8	0.3	chr13	56002272	56003812	(58360516)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1047854
2157	13.0	4.7	3.3	chr13	56003813	56004171	(58360157)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1047854
10971	10.3	0.6	4.3	chr13	57845187	57846827	(56517501)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1050064
2147	10.8	3.9	7.1	chr13	57846828	57847194	(56517134)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1050064
11181	10.1	2.0	0.4	chr13	59075049	59076602	(55287726)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1051565
2331	11.5	4.7	1.4	chr13	59076603	59076954	(55287374)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1051565
11178	11.1	1.0	0.1	chr13	60852159	60853724	(53510604)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1054072
2233	12.6	3.6	1.7	chr13	60853725	60854080	(53510248)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	1054072
8180	14.2	4.4	8.7	chr13	62045425	62047076	(52317252)	C	LTR12C	LTR/ERV1	(0)	1579	3	1055532
311	33.5	5.1	1.3	chr13	62047098	62047248	(52317080)	C	MIRb	SINE/MIR	(1)	267	111	1055533
6854	20.6	7.3	6.1	chr13	62167612	62169337	(52194991)	+	MER52A	LTR/ERV1	1	1748	(7)	1055653
5935	11.6	1.1	0.7	chr13	62855534	62856594	(51507734)	+	L1PB1	LINE/L1	5079	6144	(7)	1056526
431	29.6	10.9	6.2	chr13	62856730	62856938	(51507390)	+	MLT1H	LTR/ERVL-MaLR	98	317	(94)	1056527
1180	31.1	5.3	1.6	chr13	63249160	63249205	(51115123)	C	LTR16B2	LTR/ERVL	(4)	458	413	1057024
37	0.0	0.0	0.0	chr13	63249206	63249237	(51115091)	+	(CA)n	Simple_repeat	1	32	(0)	1057025
1180	31.1	5.3	1.6	chr13	63249238	63249628	(51114700)	C	LTR16B2	LTR/ERVL	(50)	412	4	1057024
1579	26.1	1.9	1.4	chr13	63319195	63319613	(51044715)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	85	1057102
1752	21.5	1.6	4.1	chr13	63319616	63320008	(51044320)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	6	1057103
5644	18.9	2.8	1.7	chr13	63367175	63368291	(50996037)	C	LTR28C	LTR/ERV1	(0)	1129	1	1057166
2180	15.8	5.5	2.0	chr13	63368292	63368622	(50995706)	+	L1MA5	LINE/L1	5950	6296	(4)	1057165
1892	15.3	0.0	4.7	chr13	63571646	63571945	(50792383)	C	AluSz6	SINE/Alu	(26)	286	1	1057463
2212	29.2	4.4	2.1	chr13	63606599	63608170	(50756158)	+	L1M2	LINE/L1	1876	3404	(4162)	1057498
308	33.4	12.9	8.3	chr13	63633875	63634321	(50730007)	+	MLT1K	LTR/ERVL-MaLR	98	568	(27)	1057533
1802	18.6	0.3	1.0	chr13	63929488	63929793	(50434535)	C	AluJb	SINE/Alu	(8)	304	1	1057903
26	0.0	0.0	0.0	chr13	63929803	63929827	(50434501)	+	(TGTTT)n	Simple_repeat	1	25	(0)	1057904
2972	22.1	3.4	8.1	chr13	64078060	64079025	(50285303)	C	MER52A	LTR/ERV1	(752)	1003	1	1058103
24183	7.4	1.3	0.5	chr13	64211032	64217178	(50147150)	C	L1PA5	LINE/L1	(0)	6154	4	1058248
4007	15.4	1.0	6.7	chr13	64462527	64463300	(49901028)	+	LTR1F1	LTR/ERV1	1	729	(0)	1058558
2076	12.3	0.0	3.4	chr13	64662281	64662572	(49701756)	C	AluSx1	SINE/Alu	(30)	282	1	1058827
5885	21.4	14.8	4.1	chr13	64662586	64664145	(49700183)	+	MER52A	LTR/ERV1	1	1755	(0)	1058828
22380	9.7	1.7	1.2	chr13	65103914	65109618	(49254710)	C	L1PA7	LINE/L1	(4)	6465	702	1059346
476	19.5	0.0	0.0	chr13	65829317	65829403	(48534925)	+	MER52D	LTR/ERV1	1	87	(1668)	1060266
4756	23.3	11.2	4.2	chr13	65829403	65830815	(48533513)	+	MER52D	LTR/ERV1	601	2123	(0)	1060266
968	32.6	10.2	7.4	chr13	66007965	66009201	(48355127)	+	ERVL-E-int	LTR/ERVL	1356	2738	(3019)	1060515
8304	10.2	13.8	2.4	chr13	66009202	66010503	(48353825)	+	LTR12C	LTR/ERV1	3	1491	(88)	1060516
1857	14.4	6.8	1.7	chr13	66233105	66233465	(48130863)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1060782
10895	12.9	0.5	3.5	chr13	66233466	66235146	(48129182)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1060782
1941	17.4	10.1	0.5	chr13	66282546	66282932	(48081396)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1060839
3683	27.3	11.7	8.2	chr13	66282933	66284332	(48079996)	C	MSTD-int	LTR/ERVL-MaLR	(268)	1467	4	1060838
18	16.3	2.4	0.0	chr13	66517863	66517903	(47846425)	+	(AATG)n	Simple_repeat	1	42	(0)	1061137
2482	17.7	1.4	0.2	chr13	66517972	66518391	(47845937)	C	MSTB	LTR/ERVL-MaLR	(1)	425	1	1061138
1470	19.3	0.4	1.2	chr13	67247060	67247303	(47117025)	+	AluJo	SINE/Alu	2	243	(69)	1062024
4556	13.0	0.7	0.0	chr13	67812313	67812990	(46551338)	C	THE1B-int	LTR/ERVL-MaLR	(946)	685	3	1062751
2068	15.3	3.3	0.0	chr13	67812993	67813344	(46550984)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1062751
2382	19.8	5.1	0.2	chr13	67857692	67858191	(46506137)	+	L1PBa	LINE/L1	689	1214	(5649)	1062804
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
1516	21.3	8.9	3.6	chr13	67915011	67915889	(46448439)	C	SATR1	Satellite	(65)	911	1	1062864
2507	16.9	14.3	4.2	chr13	68056803	68057351	(46306977)	C	LTR18B	LTR/ERVL	(0)	614	1	1063046
190	29.7	6.3	6.3	chr13	68057352	68057430	(46306898)	C	L2a	LINE/L2	(12)	3414	3336	1063047
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
10365	11.2	2.0	1.2	chr13	68342064	68343631	(46020697)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1063422
1899	16.2	5.0	2.8	chr13	68343632	68343987	(46020341)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1063422
2430	12.1	1.9	0.6	chr13	68510599	68510957	(45853371)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1063634
10446	13.7	1.0	1.3	chr13	68510960	68511325	(45853003)	+	THE1B-int	LTR/ERVL-MaLR	3	370	(1261)	1063634
4130	24.7	2.0	6.5	chr13	69264237	69265782	(45098546)	C	L1PA14	LINE/L1	(5258)	1435	4	1064574
715	7.8	1.0	2.8	chr13	70717106	70717211	(43647117)	+	THE1A	LTR/ERVL-MaLR	1	104	(260)	1066502
972	10.5	0.7	0.0	chr13	70717224	70717356	(43646972)	+	THE1A	LTR/ERVL-MaLR	222	355	(0)	1066502
11002	10.5	1.6	0.1	chr13	70717357	70718913	(43645415)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1066502
2198	22.6	2.4	7.1	chr13	71454329	71454904	(42909424)	+	MLT1F2	LTR/ERVL-MaLR	1	548	(12)	1067466
19	12.8	0.0	2.7	chr13	73138601	73138620	(41225708)	+	(AT)n	Simple_repeat	1	19	(0)	1070011
27	6.1	0.0	0.0	chr13	73138621	73138655	(41225673)	+	(TGTGTGTA)n	Simple_repeat	1	35	(0)	1070012
19	12.8	0.0	2.7	chr13	73138656	73138671	(41225657)	+	(AT)n	Simple_repeat	2	17	(0)	1070013
22406	9.1	1.1	0.9	chr13	74381021	74383867	(39980461)	C	L1PB1	LINE/L1	(1)	6866	4017	1071890
441	21.9	12.3	0.0	chr13	75334841	75334968	(39029360)	C	L1MC4	LINE/L1	(1449)	6593	6448	1073159
7074	15.3	5.8	1.4	chr13	75518379	75519760	(38844568)	+	LTR12C	LTR/ERV1	2	1434	(145)	1073482
1745	18.9	2.2	3.0	chr13	76123380	76123744	(38240584)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	1074317
9373	12.0	7.2	2.9	chr13	76123745	76125254	(38239074)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1074317
4495	16.8	3.9	3.5	chr13	76319516	76320885	(38043443)	C	L1MA9	LINE/L1	(57)	6255	4876	1074566
10393	10.4	0.8	0.2	chr13	76897761	76899250	(37465078)	C	THE1B-int	LTR/ERVL-MaLR	(81)	1499	1	1075397
2236	13.0	2.7	2.5	chr13	76899251	76899613	(37464715)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1075397
10725	12.7	2.3	0.6	chr13	76959221	76960822	(37403506)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	1075506
2341	13.7	0.8	1.3	chr13	76960825	76961201	(37403127)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1075507
986	24.5	2.7	6.0	chr13	76961202	76961304	(37403024)	+	L1MEd	LINE/L1	1932	2026	(5077)	1075505
423	27.8	10.3	10.7	chr13	77905110	77905439	(36458889)	C	MER102c	DNA/hAT-Charlie	(21)	320	1	1076831
2204	12.9	1.3	0.0	chr13	79159269	79159570	(35204758)	C	AluSx	SINE/Alu	(5)	307	2	1078527
4920	11.8	1.7	1.0	chr13	79159571	79159832	(35204496)	C	L1MA4A	LINE/L1	(520)	5783	5522	1078526
344	16.2	1.3	3.9	chr13	79159854	79159930	(35204398)	+	L1M2	LINE/L1	5432	5506	(791)	1078528
619	21.4	8.6	2.0	chr13	79159931	79160126	(35204202)	+	MER5C	DNA/hAT-Charlie	104	313	(0)	1078529
2317	11.9	0.0	0.0	chr13	79367125	79367435	(34996893)	+	AluSx1	SINE/Alu	1	311	(1)	1078815
1910	15.7	5.3	9.6	chr13	79367436	79367825	(34996503)	+	MSTB	LTR/ERVL-MaLR	53	408	(18)	1078814
3379	14.9	0.9	0.9	chr13	80738847	80739423	(33624905)	+	L1MA8	LINE/L1	6604	7180	(71)	1080666
2641	10.6	0.5	0.0	chr13	80990719	80991094	(33373234)	C	THE1B-int	LTR/ERVL-MaLR	(1200)	380	3	1080988
2299	14.0	3.0	1.4	chr13	80991097	80991452	(33372876)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	1080988
1640	19.1	5.8	1.5	chr13	81697810	81698379	(32665949)	C	LTR27D	LTR/ERV1	(224)	543	1	1081878
305	30.9	4.6	2.4	chr13	81698382	81698593	(32665735)	C	L1MEf	LINE/L1	(2504)	3642	3426	1081874
9654	16.1	0.6	0.5	chr13	82437530	82439158	(31925170)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1082769
10417	12.7	1.1	0.5	chr13	82574660	82576228	(31788100)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	1	1082948
417	16.5	2.5	2.5	chr13	82576239	82576319	(31788009)	C	THE1B	LTR/ERVL-MaLR	(8)	367	287	1082948
13856	20.2	2.8	0.9	chr13	82576321	82580581	(31783747)	C	L1PA15	LINE/L1	(1152)	5614	1269	1082947
22516	12.8	1.6	1.7	chr13	82952322	82957173	(31407155)	+	L1PA8	LINE/L1	10	4844	(1617)	1083398
1694	14.9	11.8	2.4	chr13	83186643	83186971	(31177357)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1083698
10693	11.6	0.9	0.7	chr13	83186972	83188545	(31175783)	+	THE1B-int	LTR/ERVL-MaLR	1	1578	(2)	1083698
6148	23.7	5.4	3.6	chr13	83644780	83647293	(30717035)	C	L1MA8	LINE/L1	(2998)	4564	2008	1084223
11514	18.2	2.2	3.0	chr13	84153697	84154747	(30209581)	C	L1PA15-16	LINE/L1	(4813)	2040	977	1084872
2201	15.1	3.0	0.6	chr13	84154748	84155100	(30209228)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1084875
11216	10.6	0.6	0.0	chr13	84155103	84156673	(30207655)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1084876
5610	11.4	10.2	11.6	chr13	84893962	84895112	(29469216)	C	LTR12D	LTR/ERV1	(122)	1132	1	1085819
276	19.6	0.0	0.0	chr13	84895113	84895163	(29469165)	+	L1P4a	LINE/L1	1014	1064	(5439)	1085820
964	34.6	9.7	4.9	chr13	85011392	85011870	(29352458)	C	L2a	LINE/L2	(679)	2740	2209	1085980
1280	26.3	2.0	8.7	chr13	85011875	85012299	(29352029)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1085983
5189	29.1	4.0	3.5	chr13	85012302	85014027	(29350301)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	1085983
8033	18.4	1.5	0.4	chr13	85026852	85028264	(29336064)	C	MSTA-int	LTR/ERVL-MaLR	(201)	1430	2	1086001
919	12.3	4.9	0.7	chr13	85028266	85028420	(29335908)	C	MSTA	LTR/ERVL-MaLR	(0)	428	267	1086001
1754	17.2	13.1	1.6	chr13	85177205	85177582	(29186746)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1086205
10560	13.5	2.7	1.3	chr13	85177583	85177637	(29186691)	+	MSTA-int	LTR/ERVL-MaLR	1	57	(1574)	1086205
2057	17.1	0.6	2.4	chr13	85177638	85178008	(29186320)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1086206
7364	12.9	13.9	3.2	chr13	85204732	85206134	(29158194)	+	LTR12C	LTR/ERV1	3	1579	(0)	1086229
2154	7.2	2.7	0.0	chr13	85362661	85362951	(29001377)	C	L1PA8	LINE/L1	(3)	6169	5871	1086445
5542	11.7	16.8	5.3	chr13	85362955	85364056	(29000272)	+	LTR12D	LTR/ERV1	1	1254	(0)	1086446
6582	19.6	15.8	3.8	chr13	85430684	85432219	(28932109)	+	MER52A	LTR/ERV1	1	1755	(0)	1086545
7393	19.8	10.4	1.8	chr13	85507694	85509295	(28855033)	+	MER52A	LTR/ERV1	1	1755	(0)	1086641
1927	15.0	4.4	3.9	chr13	85524500	85524859	(28839469)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	1086658
10096	12.9	2.8	2.9	chr13	85547453	85549084	(28815244)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1086680
1738	17.5	14.3	1.6	chr13	85549085	85549456	(28814872)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	1086680
9900	12.6	3.0	2.7	chr13	85849543	85851117	(28513211)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1087071
2265	12.6	4.1	0.0	chr13	85851118	85851466	(28512862)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1087071
385	17.5	0.0	0.0	chr13	86062135	86062197	(28302131)	+	MSTC	LTR/ERVL-MaLR	1	63	(365)	1087308
313	22.7	2.6	0.0	chr13	86062197	86062271	(28302057)	+	MSTC	LTR/ERVL-MaLR	352	428	(0)	1087308
2734	31.0	11.1	4.4	chr13	86062272	86063712	(28300616)	+	THE1D-int	LTR/ERVL-MaLR	1	1548	(83)	1087309
1036	30.1	3.1	4.0	chr13	86623997	86624404	(27739924)	C	MER45C	DNA/hAT-Tip100	(0)	953	379	1087985
571	33.1	8.2	1.8	chr13	86624525	86624810	(27739518)	C	MER45C	DNA/hAT-Tip100	(647)	306	1	1087985
9011	10.5	9.2	3.6	chr13	87768842	87770325	(26594003)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	1	1089446
2383	11.2	4.1	1.1	chr13	87770326	87770678	(26593650)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1089446
4222	19.4	1.8	1.6	chr13	88037646	88038567	(26325761)	+	L1MA10	LINE/L1	5409	6332	(2)	1089802
3760	14.5	20.7	15.2	chr13	88344730	88345965	(26018363)	C	LTR12E	LTR/ERV1	(0)	1322	1	1090200
6944	20.3	12.5	2.5	chr13	88724932	88726507	(25637821)	+	MER52A	LTR/ERV1	1	1755	(0)	1090684
2072	14.6	8.4	1.0	chr13	88869000	88869394	(25494934)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	1090864
2298	15.4	4.5	0.7	chr13	89033061	89033471	(25330857)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	1091067
8035	18.1	3.9	4.5	chr13	89033474	89035114	(25329214)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	1091067
88	27.8	1.0	4.1	chr13	89594913	89595226	(24769102)	+	(AT)n	Simple_repeat	1	317	(0)	1091826
16	0.0	0.0	0.0	chr13	89595226	89595243	(24769085)	+	(TG)n	Simple_repeat	1	18	(0)	1091827
376	7.7	0.0	1.9	chr13	89595244	89595296	(24769032)	+	Ricksha_c	DNA/MULE-MuDR	859	910	(1138)	1091828
15212	8.0	0.7	0.2	chr13	89595306	89597273	(24767055)	+	HERVL-int	LTR/ERVL	3421	5397	(257)	1091829
842	29.9	13.8	0.7	chr13	91290601	91291014	(23073314)	C	MLT1G-int	LTR/ERVL-MaLR	(902)	507	31	1094054
14163	18.6	6.0	2.3	chr13	91955360	91959057	(22405271)	+	L1M2	LINE/L1	730	4591	(2971)	1094966
10111	15.6	0.6	0.4	chr13	92357904	92359532	(22004796)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1095456
2086	13.9	12.4	0.8	chr13	92359533	92359910	(22004418)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1095456
1986	13.0	4.7	6.5	chr13	94636146	94636445	(19727883)	C	THE1B	LTR/ERVL-MaLR	(62)	302	2	1098641
1963	22.8	8.7	12.1	chr13	94719525	94719859	(19644469)	C	L1ME3F	LINE/L1	(1146)	5000	4622	1098785
31	3.3	0.0	0.0	chr13	94719860	94719890	(19644438)	+	(TC)n	Simple_repeat	1	31	(0)	1098787
1557	21.4	1.4	0.0	chr13	94719891	94720171	(19644157)	C	AluJb	SINE/Alu	(27)	285	1	1098788
1963	22.8	8.7	12.1	chr13	94720172	94720193	(19644135)	C	L1ME3F	LINE/L1	(1525)	4621	4610	1098785
2170	9.0	1.0	1.4	chr13	94720194	94720481	(19643847)	C	AluSg7	SINE/Alu	(6)	303	17	1098789
2251	11.3	0.3	0.0	chr13	95362338	95362630	(19001698)	+	AluSc8	SINE/Alu	3	296	(15)	1099926
1840	18.0	4.3	15.3	chr13	95362631	95362936	(19001392)	+	LTR8	LTR/ERV1	266	535	(156)	1099922
2307	11.7	0.0	0.3	chr13	95363023	95363331	(19000997)	+	AluSc8	SINE/Alu	1	308	(3)	1099927
17	22.8	0.0	2.1	chr13	99973843	99973890	(14390438)	+	A-rich	Low_complexity	1	48	(0)	1107130
2320	16.1	0.0	0.0	chr13	100688736	100689088	(13675240)	C	MER66-int	LTR/ERV1	(0)	6676	6324	1108344
1064	16.8	1.6	2.2	chr13	100689167	100689349	(13674979)	C	MER66-int	LTR/ERV1	(1848)	4828	4647	1108344
10625	13.4	1.9	2.2	chr13	100689351	100689907	(13674421)	+	THE1C-int	LTR/ERVL-MaLR	5	539	(1092)	1108345
11205	10.3	1.3	0.1	chr13	103092292	103093853	(11270475)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1111735
1842	14.3	5.4	3.2	chr13	103093854	103094200	(11270128)	C	THE1B	LTR/ERVL-MaLR	(0)	364	10	1111735
2043	27.4	7.3	1.8	chr13	103094245	103095582	(11268746)	+	L1ME2	LINE/L1	4944	6507	(0)	1111727
11027	10.6	1.9	0.5	chr13	103830665	103832217	(10532111)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	1	1112676
1992	16.3	2.2	4.3	chr13	103832251	103832622	(10531706)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1112676
2071	12.0	4.7	0.9	chr14	20273781	20274107	(86769611)	+	THE1C	LTR/ERVL-MaLR	1	340	(35)	1127762
1170	9.6	2.7	0.0	chr14	20274106	20274283	(86769435)	C	MSTB-int	LTR/ERVL-MaLR	(1468)	183	1	1127761
2169	14.9	8.0	0.5	chr14	20274284	20274675	(86769043)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	1127761
3185	8.1	1.2	0.0	chr14	21548091	21548511	(85495207)	C	THE1B-int	LTR/ERVL-MaLR	(1154)	426	1	1129976
462	16.2	7.0	0.0	chr14	21548533	21548612	(85495106)	C	THE1B	LTR/ERVL-MaLR	(278)	86	1	1129976
2090	10.7	0.3	2.3	chr14	21548632	21548930	(85494788)	C	AluSg7	SINE/Alu	(15)	294	2	1129981
3032	15.0	0.2	0.4	chr14	21816713	21817241	(85226477)	C	THE1B-int	LTR/ERVL-MaLR	(1121)	530	3	1130413
2152	11.7	6.0	2.0	chr14	21817244	21817592	(85226126)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1130413
6941	16.9	1.5	3.2	chr14	21817594	21819702	(85224016)	C	L1MC1	LINE/L1	(448)	6060	3994	1130414
13	12.5	0.0	0.0	chr14	22333072	22333097	(84710621)	+	(AATAA)n	Simple_repeat	1	26	(0)	1131048
1610	23.4	8.3	6.2	chr14	22333444	22333621	(84710097)	C	LTR106_Mam	LTR	(0)	708	525	1131049
971	26.8	4.5	11.6	chr14	22664261	22664537	(84379181)	+	MLT1G3	LTR/ERVL-MaLR	1	281	(314)	1131500
957	18.8	0.0	0.0	chr14	22664538	22664697	(84379021)	+	AluJo	SINE/Alu	140	299	(13)	1131501
971	27.1	5.6	10.5	chr14	22664698	22664947	(84378771)	+	MLT1G3	LTR/ERVL-MaLR	242	467	(88)	1131500
13	6.6	2.6	10.0	chr14	23408352	23408391	(83635327)	+	(CCT)n	Simple_repeat	1	37	(0)	1132821
11439	10.5	0.5	0.6	chr14	24547702	24549283	(82494435)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1134384
2027	11.7	4.8	3.7	chr14	24549296	24549643	(82494075)	C	THE1B	LTR/ERVL-MaLR	(12)	352	1	1134384
11404	11.7	3.2	0.9	chr14	24623786	24624171	(82419547)	C	L1PA8	LINE/L1	(6052)	409	8	1134447
16652	13.6	1.6	2.4	chr14	27118214	27122196	(79921522)	C	HERVL-int	LTR/ERVL	(0)	5654	1476	1137688
1918	9.7	0.0	1.8	chr14	27122196	27122467	(79921251)	C	HERVL-int	LTR/ERVL	(5384)	270	4	1137688
2907	8.2	2.3	6.3	chr14	27122468	27122925	(79920793)	C	MLT2A1	LTR/ERVL	(3)	441	3	1137688
947	8.6	2.1	0.0	chr14	27420649	27420788	(79622930)	C	THE1C-int	LTR/ERVL-MaLR	(1436)	144	2	1138025
2290	13.9	2.4	0.0	chr14	27420790	27421155	(79622563)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1138025
8903	13.6	6.5	2.1	chr14	27623156	27624663	(79419055)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1138260
2125	14.9	0.6	2.4	chr14	27624665	27625035	(79418683)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1138260
2061	13.1	8.4	1.5	chr14	27803878	27804219	(79239499)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1138499
6200	17.4	2.6	4.6	chr14	27804222	27804626	(79239092)	+	THE1B-int	LTR/ERVL-MaLR	3	425	(1226)	1138499
291	31.7	6.3	0.9	chr14	29566052	29566156	(77477562)	C	MIRc	SINE/MIR	(105)	163	53	1140682
353	7.4	3.6	0.0	chr14	29566347	29566400	(77477318)	C	THE1B-int	LTR/ERVL-MaLR	(1524)	56	1	1140683
2411	11.3	0.0	12.9	chr14	29566401	29566818	(77476900)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1140683
9918	12.1	3.8	3.4	chr14	29566819	29568391	(77475327)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1140683
2437	11.5	1.9	0.0	chr14	29568393	29568749	(77474969)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1140683
7752	9.9	1.6	0.0	chr14	29839475	29840564	(77203154)	C	THE1B-int	LTR/ERVL-MaLR	(472)	1108	1	1141043
2263	10.1	4.7	4.9	chr14	29840565	29840929	(77202789)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1141043
2524	8.6	1.1	1.4	chr14	29879208	29879563	(77164155)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1141092
11081	9.9	2.0	0.7	chr14	29879565	29881123	(77162595)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	1141092
9608	16.1	1.0	3.1	chr14	30090134	30091798	(76951920)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1141358
2205	14.7	10.8	0.5	chr14	30091799	30092182	(76951536)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1141358
15871	10.8	2.6	6.2	chr14	30092183	30094068	(76949650)	+	L1MA2	LINE/L1	4410	6298	(1267)	1141357
10338	11.5	6.0	2.6	chr14	31331240	31331618	(75712100)	C	THE1C-int	LTR/ERVL-MaLR	(1176)	404	1	1143424
2241	13.2	4.8	2.5	chr14	31331619	31331983	(75711735)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	1143424
383	29.6	11.5	4.6	chr14	31331984	31332124	(75711594)	+	L1MC4	LINE/L1	7818	7949	(93)	1143423
848	27.7	4.7	3.6	chr14	32563207	32563457	(74480261)	+	MIR	SINE/MIR	8	261	(1)	1145332
1420	26.0	1.6	7.6	chr14	34310475	34310936	(72732782)	C	MLT1H1-int	LTR/ERVL-MaLR	(975)	434	1	1147555
2101	24.0	8.5	2.9	chr14	34310937	34311459	(72732259)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	1	1147555
600	25.3	11.4	0.6	chr14	36388976	36389154	(70654564)	C	MIRb	SINE/MIR	(65)	203	3	1151539
2214	14.1	0.0	0.3	chr14	37121506	37121818	(69921900)	+	AluSx1	SINE/Alu	1	312	(0)	1152505
11490	9.6	1.9	1.7	chr14	37205939	37207095	(69836623)	+	THE1B-int	LTR/ERVL-MaLR	418	1580	(0)	1152660
16	21.4	0.0	2.2	chr14	37585141	37585185	(69458533)	+	(CCCTC)n	Simple_repeat	1	45	(0)	1153163
700	27.1	9.8	1.1	chr14	37847108	37847376	(69196342)	+	LTR67B	LTR/ERVL	325	619	(1)	1153479
11384	10.2	0.8	0.4	chr14	38060865	38062437	(68981281)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1153773
2208	15.0	0.8	3.5	chr14	38062439	38062812	(68980906)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1153773
3970	21.4	3.7	4.6	chr14	38563602	38565173	(68478545)	+	L1M2	LINE/L1	2189	3736	(3110)	1154406
11281	10.1	1.0	0.1	chr14	40800343	40801907	(66241811)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1157287
2223	12.0	1.1	0.8	chr14	40801910	40802261	(66241457)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	1157287
10695	11.9	0.8	0.8	chr14	40958899	40960477	(66083241)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1157488
1924	15.3	6.6	2.9	chr14	40960479	40960828	(66082890)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1157488
1986	17.7	0.8	3.5	chr14	42271586	42271959	(64771759)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1159118
1759	10.4	5.9	2.0	chr14	42271960	42272093	(64771625)	+	THE1B-int	LTR/ERVL-MaLR	1	150	(1430)	1159118
27	0.0	0.0	0.0	chr14	42272094	42272119	(64771599)	+	(GACTTT)n	Simple_repeat	1	26	(0)	1159119
1759	10.4	5.9	2.0	chr14	42272120	42272278	(64771440)	+	THE1B-int	LTR/ERVL-MaLR	151	306	(1274)	1159118
1973	19.4	2.8	3.6	chr14	42454403	42454964	(64588754)	+	MLT2A2	LTR/ERVL	3	553	(1)	1159333
18581	11.8	1.2	2.0	chr14	42454968	42455300	(64588418)	+	HERVL-int	LTR/ERVL	5	332	(5322)	1159334
4583	12.4	6.4	7.7	chr14	42674062	42674917	(64368801)	C	THE1C-int	LTR/ERVL-MaLR	(736)	844	1	1159595
2049	16.8	1.6	1.6	chr14	42674918	42675292	(64368426)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1159595
1940	16.0	6.3	1.6	chr14	42785073	42785435	(64258283)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1159743
8645	13.9	5.3	4.6	chr14	42785437	42786927	(64256791)	+	THE1D-int	LTR/ERVL-MaLR	2	1502	(78)	1159743
2123	13.7	1.1	0.6	chr14	42986766	42987118	(64056600)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1159975
10925	11.6	0.6	0.4	chr14	42987119	42988692	(64055026)	+	THE1A-int	LTR/ERVL-MaLR	1	1578	(2)	1159975
8845	17.7	3.9	0.5	chr14	44296412	44298005	(62745713)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	2	1161584
2480	14.8	6.6	0.0	chr14	44298009	44298406	(62745312)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	1161584
1763	14.8	8.8	5.7	chr14	44347135	44347486	(62696232)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1161653
11214	10.2	2.2	0.1	chr14	44347487	44349033	(62694685)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1161653
1900	13.5	6.3	3.4	chr14	44721225	44721577	(62322141)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1162085
11897	8.6	0.9	0.1	chr14	44721578	44723143	(62320575)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1162085
1513	22.9	7.6	1.6	chr14	45487079	45487512	(61556206)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	1163226
397	26.8	6.8	0.7	chr14	45487541	45487679	(61556039)	+	L2a	LINE/L2	3081	3228	(198)	1163223
2304	9.5	0.0	0.0	chr14	45487689	45488019	(61555699)	C	AluY	SINE/Alu	(0)	311	1	1163227
1678	15.7	12.6	3.3	chr14	45933714	45934042	(61109676)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1163726
10955	11.0	1.9	0.1	chr14	45934043	45935593	(61108125)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1163726
2694	8.7	1.9	0.8	chr14	46111682	46112052	(60931666)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1163910
9291	12.6	6.2	0.8	chr14	46112053	46113546	(60930172)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1163910
1686	18.5	5.7	2.6	chr14	48182001	48182091	(58861627)	+	ERVL-B4-int	LTR/ERVL	2814	2904	(2810)	1166484
1896	13.7	8.1	1.1	chr14	48182092	48182445	(58861273)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1166485
11142	12.0	0.6	0.9	chr14	48182446	48183903	(58859815)	+	THE1D-int	LTR/ERVL-MaLR	1	1449	(182)	1166485
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
1245	15.1	0.0	2.2	chr14	50510880	50511109	(56532609)	+	L1MC2	LINE/L1	5574	5798	(1987)	1170091
3192	12.6	3.7	2.7	chr14	50511110	50511696	(56532022)	+	L1MA5A	LINE/L1	5695	6287	(10)	1170092
866	23.2	9.3	0.9	chr14	52291233	52291502	(54752216)	C	L1ME3B	LINE/L1	(24)	6218	5925	1172732
599	23.3	10.6	0.5	chr14	52291509	52291711	(54752007)	C	LTR16A1	LTR/ERVL	(0)	456	231	1172733
249	30.3	13.9	3.9	chr14	53006133	53006235	(54037483)	C	L2b	LINE/L2	(90)	3285	3171	1173918
2246	14.1	2.5	1.9	chr14	53984780	53985141	(53058577)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1175305
11709	9.7	1.6	0.0	chr14	53985142	53986695	(53057023)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1175305
890	26.6	15.1	7.5	chr14	54050132	54050834	(52992884)	+	L1MC4	LINE/L1	6991	7747	(295)	1175385
430	25.0	0.0	0.0	chr14	54251761	54251864	(52791854)	C	MER102a	DNA/hAT-Charlie	(0)	330	235	1175652
1403	17.8	21.4	0.0	chr14	54467156	54467442	(52576276)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1175978
7501	21.4	9.9	0.4	chr14	54467444	54469011	(52574707)	+	MLT1A0-int	LTR/ERVL-MaLR	2	1735	(0)	1175978
1845	15.7	0.0	4.3	chr14	54519246	54519550	(52524168)	C	AluJo	SINE/Alu	(20)	292	1	1176056
293	35.5	6.6	1.6	chr14	54519604	54519789	(52523929)	C	L1MEi	LINE/L1	(1883)	329	134	1176057
11093	10.6	1.0	0.1	chr14	55619823	55621387	(51422331)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1178030
2115	13.3	5.0	2.8	chr14	55621389	55621744	(51421974)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1178030
308	30.6	3.5	8.8	chr14	56847677	56847916	(50195802)	C	L2c	LINE/L2	(192)	3195	2969	1179827
542	32.5	8.0	0.4	chr14	56847925	56848165	(50195553)	C	MIR	SINE/MIR	(0)	262	2	1179828
1057	17.5	18.7	4.1	chr14	56921153	56921515	(50122203)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1179967
5247	22.5	9.0	8.7	chr14	56921520	56922066	(50121652)	+	MSTC-int	LTR/ERVL-MaLR	4	497	(1238)	1179967
337	37.2	3.9	6.7	chr14	59426254	59427164	(47616554)	+	L2c	LINE/L2	2331	3207	(180)	1183694
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
468	20.7	0.0	0.0	chr14	60165538	60165624	(46878094)	+	AluSz	SINE/Alu	48	134	(178)	1184650
5836	7.8	1.1	0.0	chr14	61143680	61144418	(45899300)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	834	1186033
1075	7.0	1.4	0.0	chr14	61144419	61144561	(45899157)	C	THE1B-int	LTR/ERVL-MaLR	(1435)	145	1	1186033
1911	11.6	12.6	1.2	chr14	61144562	61144883	(45898835)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1186033
2806	19.8	6.7	1.2	chr14	61240097	61240698	(45803020)	C	LTR9B	LTR/ERV1	(0)	644	7	1186214
492	25.8	3.9	0.8	chr14	61240705	61240829	(45802889)	C	MER21-int	LTR/ERVL	(4061)	130	2	1186203
4172	15.3	11.2	1.4	chr14	61240844	61241620	(45802098)	C	MER21B	LTR/ERVL	(5)	863	1	1186203
10198	10.2	9.0	0.9	chr14	61310133	61311627	(45732091)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	1186331
1331	14.3	4.7	26.2	chr14	61311630	61312121	(45731597)	C	THE1C	LTR/ERVL-MaLR	(0)	381	1	1186331
11137	10.9	2.0	1.5	chr14	61373903	61375447	(45668271)	C	MSTA-int	LTR/ERVL-MaLR	(85)	1546	1	1186425
1680	14.9	18.5	1.4	chr14	61375448	61375801	(45667917)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1186425
1135	8.1	0.0	0.0	chr14	61375899	61376034	(45667684)	+	AluSq	SINE/Alu	165	300	(13)	1186427
2590	12.3	11.3	0.0	chr14	61882954	61883713	(45160005)	C	THE1D-int	LTR/ERVL-MaLR	(783)	848	3	1187206
2241	14.8	3.9	0.0	chr14	61883716	61884081	(45159637)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1187206
958	25.1	7.1	0.4	chr14	62659157	62659392	(44384326)	+	MLT1A1	LTR/ERVL-MaLR	154	406	(2)	1188138
4069	22.7	2.5	4.2	chr14	62659391	62660374	(44383344)	+	MLT1A1-int	LTR/ERVL-MaLR	1	967	(768)	1188138
16	11.2	0.0	3.2	chr14	63599979	63600009	(43443709)	+	(AAT)n	Simple_repeat	1	31	(0)	1189576
1790	16.1	1.7	2.0	chr14	63600214	63600511	(43443207)	+	AluJr4	SINE/Alu	3	299	(13)	1189577
1696	19.6	2.1	6.9	chr14	63829917	63830365	(43213353)	+	L1MB8	LINE/L1	6199	6625	(51)	1190136
1779	17.9	0.7	0.7	chr14	63830379	63830669	(43213049)	+	AluJr	SINE/Alu	1	291	(21)	1190160
12216	9.2	1.9	1.0	chr14	65395041	65396295	(41647423)	C	THE1B-int	LTR/ERVL-MaLR	(309)	1271	1	1193095
2319	12.1	4.4	3.9	chr14	65396296	65396657	(41647061)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1193095
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
699	19.6	3.7	13.9	chr14	69034500	69034772	(38008946)	+	L1ME3	LINE/L1	5913	6156	(6)	1198747
204	31.5	0.0	0.0	chr14	70359196	70359249	(36684469)	+	MIRb	SINE/MIR	117	170	(98)	1201066
1979	11.3	16.7	1.7	chr14	70560557	70560917	(36482801)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	1201335
11365	10.9	1.5	0.4	chr14	70560918	70562530	(36481188)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1201335
1708	25.5	3.7	0.7	chr14	75592840	75593261	(31450457)	C	MSTB2-int	LTR/ERVL-MaLR	(1298)	437	3	1210747
2419	16.4	5.0	1.8	chr14	75593265	75593706	(31450012)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1210747
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
737	29.4	14.4	2.4	chr14	77979476	77979809	(29063909)	C	LTR16E1	LTR/ERVL	(0)	538	158	1215409
276	28.4	6.1	7.7	chr14	77979872	77980039	(29063679)	C	L2b	LINE/L2	(628)	2791	2627	1215407
10870	10.8	1.3	0.8	chr14	83943611	83945175	(23098543)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	7	1224140
1981	14.7	5.0	2.8	chr14	83945182	83945537	(23098181)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1224140
277	31.9	5.6	6.4	chr14	89826672	89826922	(17216796)	C	ERVL-E-int	LTR/ERVL	(5315)	352	104	1232807
737	25.1	10.5	2.7	chr14	89827005	89827303	(17216415)	C	LTR50	LTR/ERVL	(0)	795	471	1232808
11724	8.6	1.8	0.1	chr14	90937902	90939453	(16104265)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1234720
2165	12.4	4.7	3.9	chr14	90939454	90939814	(16103904)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1234720
16	0.0	0.0	0.0	chr14	91127920	91127936	(15915782)	+	(T)n	Simple_repeat	1	17	(0)	1235118
1825	15.1	0.6	6.7	chr14	91128192	91128522	(15915196)	+	AluJb	SINE/Alu	1	311	(1)	1235119
1185	14.3	1.4	6.7	chr14	91754875	91755099	(15288619)	+	MER20	DNA/hAT-Charlie	1	213	(6)	1236266
257	34.1	4.3	3.6	chr14	91755110	91755249	(15288469)	+	L3b	LINE/CR1	5000	5140	(92)	1236267
2131	14.7	3.0	3.0	chr14	91805902	91806265	(15237453)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1236337
11465	9.3	1.1	0.1	chr14	91806266	91807829	(15235889)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1236337
2688	22.4	9.2	2.6	chr14	93504914	93506211	(13537507)	C	L1ME3A	LINE/L1	(3222)	2924	1539	1239586
2754	9.7	0.5	0.5	chr14	94154412	94154786	(12888932)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1240718
10643	11.2	6.0	0.3	chr14	94154790	94156323	(12887395)	+	THE1C-int	LTR/ERVL-MaLR	4	1631	(0)	1240718
2629	12.6	3.1	1.7	chr14	95165987	95166406	(11877312)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1242529
9031	17.2	3.0	0.6	chr14	95166407	95168016	(11875702)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	1242529
643	27.0	12.1	5.4	chr14	95410316	95410777	(11632941)	+	MLT1J	LTR/ERVL-MaLR	1	497	(15)	1242962
215	26.5	8.1	2.9	chr14	95410886	95410955	(11632763)	C	MIRb	SINE/MIR	(148)	120	47	1242963
227	31.7	4.7	3.9	chr14	95411004	95411131	(11632587)	+	MIR3	SINE/MIR	61	189	(19)	1242964
410	31.3	7.0	6.7	chr14	96024995	96025306	(11018412)	C	MLT1K-int	LTR/ERVL-MaLR	(1073)	314	2	1244106
977	24.8	13.0	0.7	chr14	96025350	96025646	(11018072)	C	MLT1K	LTR/ERVL-MaLR	(70)	525	187	1244106
725	22.6	11.4	2.6	chr14	96368560	96368831	(10674887)	+	MSTB1	LTR/ERVL-MaLR	1	299	(133)	1244747
6953	19.7	8.8	0.7	chr14	96368833	96369708	(10674010)	+	MSTB1-int	LTR/ERVL-MaLR	1	940	(711)	1244748
13	18.1	5.3	0.0	chr14	97522264	97522301	(9521417)	+	(CATTTCT)n	Simple_repeat	1	40	(0)	1246867
33	23.0	2.9	2.9	chr14	97522404	97522506	(9521212)	+	(TTTC)n	Simple_repeat	1	103	(0)	1246868
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
290	30.0	2.0	0.0	chr14	99797789	99797888	(7245830)	C	Charlie15a	DNA/hAT-Charlie	(18)	206	105	1250650
928	33.0	13.6	2.1	chr14	99797988	99798392	(7245326)	C	L3	LINE/CR1	(101)	3998	3530	1250651
248	27.3	0.0	3.8	chr14	100155176	100155255	(6888463)	+	Tigger16a	DNA/TcMar-Tigger	126	202	(755)	1251289
12	21.2	2.1	4.2	chr14	100736839	100736885	(6306833)	+	(CCCCGT)n	Simple_repeat	1	48	(0)	1252324
315	27.3	5.3	8.0	chr14	103611165	103611271	(3432447)	C	LTR33A_	LTR/ERVL	(389)	142	42	1257146
1262	17.1	11.7	2.5	chr14	103611502	103611741	(3431977)	+	AluJo	SINE/Alu	46	310	(2)	1257151
885	15.7	3.1	11.4	chr14	103611742	103611906	(3431812)	+	L1MB3	LINE/L1	5960	6124	(59)	1257152
16	15.0	5.3	5.0	chr14	103715758	103715814	(3327904)	+	G-rich	Low_complexity	1	60	(0)	1257366
3770	19.6	3.6	4.3	chr14	103771812	103772665	(3271053)	C	L1ME1	LINE/L1	(2)	6177	5325	1257437
384	32.5	11.4	1.0	chr14	104619547	104619742	(2423976)	+	L1MC4a	LINE/L1	4	222	(5993)	1258600
1966	27.3	10.2	1.4	chr14	104619776	104620982	(2422736)	+	L1MC4a	LINE/L1	287	1608	(4607)	1258600
1595	17.7	5.2	7.2	chr14	105962303	105962691	(1081027)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1260166
1472	11.8	2.1	1.3	chr14	105962694	105962919	(1080799)	+	THE1D-int	LTR/ERVL-MaLR	3	230	(1401)	1260166
4567	6.6	4.8	2.4	chr14	105962920	105963149	(1080569)	+	MER4E1	LTR/ERV1	1	229	(552)	1260167
335	35.5	1.5	0.5	chr14	106108936	106109133	(934585)	C	MER68-int	LTR/ERVL	(2666)	1525	1326	1260326
329	30.9	6.8	6.8	chr14	106109049	106109416	(934302)	C	MER4B-int	LTR/ERV1	(2441)	4317	3950	1260327
425	26.8	2.3	0.0	chr14	106579497	106579623	(464095)	+	MER65B	LTR/ERV1	1	130	(401)	1260841
684	31.6	9.3	5.0	chr14	106580115	106580779	(462939)	C	MER4B-int	LTR/ERV1	(2972)	3786	3090	1260842
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
1920	22.5	5.1	3.6	chr15	27432494	27433198	(74557991)	C	MLT1D-int	LTR/ERVL-MaLR	(666)	705	68	1272623
1032	18.4	4.6	0.0	chr15	27433228	27433433	(74557756)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	290	1272623
621	19.8	0.0	0.2	chr15	27433454	27433587	(74557602)	C	L1MB7	LINE/L1	(7383)	134	17	1272620
834	28.9	7.1	4.6	chr15	31390210	31390844	(70600345)	C	HAL1ME	LINE/L1	(653)	1812	1195	1278527
8849	7.7	1.5	0.0	chr15	35275733	35277438	(66713751)	C	L1PB1	LINE/L1	(280)	5871	4138	1284186
257	8.8	1.2	0.0	chr15	35277439	35277480	(66713709)	+	MSTB	LTR/ERVL-MaLR	380	427	(1)	1284184
8944	16.8	3.5	1.7	chr15	35277482	35278767	(66712422)	+	MSTB-int	LTR/ERVL-MaLR	1	1326	(325)	1284184
11598	9.6	0.6	1.8	chr15	35486678	35488328	(66502861)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	1284433
1803	15.6	6.9	0.3	chr15	35488331	35488684	(66502505)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	1284433
286	32.5	6.8	4.5	chr15	35604810	35605009	(66386180)	C	MIR3	SINE/MIR	(3)	205	1	1284593
390	31.8	11.3	0.6	chr15	35605150	35605310	(66385879)	C	MIR3	SINE/MIR	(7)	201	22	1284594
48	0.0	0.0	0.0	chr15	37101304	37101344	(64889845)	+	(GT)n	Simple_repeat	1	41	(0)	1286515
24	8.8	0.0	0.0	chr15	37101345	37101378	(64889811)	+	(GC)n	Simple_repeat	1	34	(0)	1286516
34	20.0	8.1	3.8	chr15	43824109	43824256	(58166933)	+	(TA)n	Simple_repeat	1	160	(0)	1297702
3219	28.3	6.7	7.5	chr15	49651213	49652770	(52338419)	+	ERV3-16A3_I-int	LTR/ERVL	3682	5225	(1)	1306522
423	30.2	5.8	0.0	chr15	49652772	49652924	(52338265)	+	ERV3-16A3_LTR	LTR/ERVL	1	166	(285)	1306522
383	26.7	9.6	0.7	chr15	49652943	49653093	(52338096)	+	MLT1D	LTR/ERVL-MaLR	322	487	(2)	1306523
1324	22.8	11.8	2.1	chr15	49653090	49653509	(52337680)	+	MLT1D	LTR/ERVL-MaLR	1	462	(43)	1306523
2922	27.3	10.5	4.2	chr15	51167535	51169082	(50822107)	C	L1MD3	LINE/L1	(948)	7047	5391	1309174
16	23.0	6.7	2.5	chr15	52427762	52427836	(49563353)	+	GA-rich	Low_complexity	1	80	(0)	1311271
189	20.0	0.0	0.0	chr15	52428051	52428085	(49563104)	+	L2	LINE/L2	2230	2264	(1155)	1311272
2369	12.1	0.0	0.6	chr15	59929404	59929717	(42061472)	C	AluSq2	SINE/Alu	(1)	312	1	1322990
301	29.7	7.9	0.8	chr15	59930147	59930275	(42060914)	+	MamRep605	LTR?	467	605	(244)	1322991
12234	9.4	0.6	0.5	chr15	60294549	60296122	(41695067)	C	THE1A-int	LTR/ERVL-MaLR	(4)	1576	1	1323560
2792	8.5	0.6	0.0	chr15	60296123	60296474	(41694715)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	1323560
1219	23.8	18.7	0.6	chr15	65082506	65083067	(36908122)	+	L2a	LINE/L2	2745	3418	(8)	1331848
195	33.8	4.3	2.2	chr15	66690462	66690597	(35300592)	+	L2c	LINE/L2	3027	3165	(222)	1335260
2072	16.5	10.5	1.6	chr15	67796270	67796651	(34194538)	C	MSTA	LTR/ERVL-MaLR	(4)	424	5	1337147
708	28.2	8.6	1.5	chr15	67796741	67797116	(34194073)	C	MLT1J	LTR/ERVL-MaLR	(14)	498	1	1337148
945	26.7	10.3	2.2	chr15	67797152	67797683	(34193506)	C	L1MEd	LINE/L1	(5256)	1847	1199	1337145
180	24.7	9.4	3.8	chr15	68191881	68191960	(33799229)	+	MIR	SINE/MIR	18	102	(160)	1337884
1250	24.9	11.0	7.7	chr15	68536606	68537087	(33454102)	+	MLT1J	LTR/ERVL-MaLR	1	500	(12)	1338515
11623	9.8	0.9	2.3	chr15	69707049	69708646	(32282543)	C	THE1A-int	LTR/ERVL-MaLR	(5)	1575	1	1340759
2641	9.9	0.6	0.0	chr15	69708647	69708999	(32282190)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1340759
384	25.0	3.1	6.0	chr15	69801757	69801922	(32189267)	+	L1M6	LINE/L1	40	200	(6296)	1340929
400	29.1	4.1	11.9	chr15	70718412	70718704	(31272485)	+	MLT1I	LTR/ERVL-MaLR	100	368	(43)	1342628
419	26.5	5.8	10.4	chr15	70718737	70718900	(31272289)	+	MLT1I-int	LTR/ERVL-MaLR	5	160	(1227)	1342628
43	12.6	6.1	4.1	chr15	70719021	70719135	(31272054)	+	GA-rich	Low_complexity	1	122	(0)	1342629
2272	11.2	2.2	0.0	chr15	71225536	71225840	(30765349)	C	AluSz	SINE/Alu	(0)	312	1	1343397
540	30.4	9.3	0.5	chr15	71226036	71226250	(30764939)	+	MIRc	SINE/MIR	13	248	(20)	1343398
792	20.1	0.0	2.4	chr15	71758858	71759025	(30232164)	+	L1ME4c	LINE/L1	295	458	(372)	1344309
911	8.8	0.0	5.1	chr15	72237723	72237878	(29753311)	+	L1MA3	LINE/L1	6158	6305	(0)	1345118
219	21.7	0.0	0.0	chr15	72630552	72630597	(29360592)	+	MIRc	SINE/MIR	81	126	(142)	1345822
8057	22.1	2.6	3.2	chr15	73487195	73488940	(28502249)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	1	1347220
1614	17.8	2.3	5.0	chr15	73488941	73489200	(28501989)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	160	1347220
2234	12.2	0.0	0.7	chr15	73489201	73489504	(28501685)	C	AluSz	SINE/Alu	(9)	303	2	1347222
232	21.1	4.3	18.2	chr15	73872760	73872869	(28118320)	C	L2c	LINE/L2	(5)	3382	3289	1347866
2361	10.1	0.3	0.0	chr15	73964430	73964737	(28026452)	C	AluSx	SINE/Alu	(3)	309	1	1348009
2726	23.3	6.1	2.1	chr15	73964738	73964776	(28026413)	C	L1MCc	LINE/L1	(3886)	3055	3020	1348007
275	33.9	8.4	0.0	chr15	73964793	73964901	(28026288)	C	L1MCc	LINE/L1	(5356)	1067	949	1348007
351	22.5	7.3	2.2	chr15	73965004	73965094	(28026095)	C	L1MCc	LINE/L1	(5508)	915	820	1348007
256	33.9	6.1	3.1	chr15	74382295	74382422	(27608767)	C	MIR3	SINE/MIR	(17)	191	60	1348746
2180	12.1	0.3	0.3	chr15	76298046	76298342	(25692847)	C	AluSz	SINE/Alu	(15)	297	1	1352341
547	23.2	12.3	3.1	chr15	76298502	76298692	(25692497)	C	MIR	SINE/MIR	(40)	222	12	1352342
3163	25.5	8.8	3.9	chr15	76566824	76568190	(25422999)	C	L1ME3B	LINE/L1	(5)	6237	4837	1352775
533	32.6	9.1	0.4	chr15	79592652	79592882	(22398307)	+	MIR	SINE/MIR	4	256	(6)	1358078
232	26.4	6.0	4.3	chr15	79592903	79593017	(22398172)	C	L2c	LINE/L2	(78)	3309	3193	1358079
628	34.3	1.5	1.9	chr15	79593346	79593669	(22397520)	C	L1M6	LINE/L1	(5496)	1000	678	1358080
259	33.7	7.0	11.2	chr15	79721504	79721994	(22269195)	C	L2a	LINE/L2	(665)	2754	2286	1358269
554	26.3	5.2	4.0	chr15	79722191	79722416	(22268773)	+	MLT1K	LTR/ERVL-MaLR	367	595	(0)	1358271
16	13.2	0.0	0.0	chr15	79722446	79722470	(22268719)	+	(A)n	Simple_repeat	1	25	(0)	1358272
3239	22.5	4.5	0.7	chr15	79722744	79723513	(22267676)	+	L1MC4	LINE/L1	6460	7260	(782)	1358273
2191	17.0	4.0	1.9	chr15	80080620	80081038	(21910151)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1358940
2453	15.8	4.5	0.2	chr15	81031287	81031686	(20959503)	+	MSTB	LTR/ERVL-MaLR	4	421	(5)	1360571
395	22.6	16.5	4.8	chr15	89574824	89575009	(12416180)	C	L1M5	LINE/L1	(311)	5813	5602	1374497
2757	6.2	0.0	0.0	chr15	90395313	90395619	(11595570)	C	AluYk3	SINE/Alu	(4)	307	1	1376283
12	21.1	6.2	5.9	chr15	90871296	90871375	(11119814)	+	G-rich	Low_complexity	1	85	(0)	1377286
229	20.0	2.6	2.6	chr15	91119574	91119650	(10871539)	C	L1ME4a	LINE/L1	(0)	6124	6048	1377742
15912	7.9	1.1	0.8	chr15	92207685	92210712	(9780477)	+	HERV9N-int	LTR/ERV1	1	2953	(2421)	1379517
834	29.0	11.1	6.4	chr15	92275893	92276364	(9714825)	+	LTR33	LTR/ERVL	5	501	(14)	1379596
649	35.1	3.7	4.1	chr15	92276388	92276898	(9714291)	+	ERVL-E-int	LTR/ERVL	1410	1918	(3749)	1379597
610	26.6	17.9	4.1	chr15	92331854	92332291	(9658898)	+	LTR33	LTR/ERVL	16	515	(0)	1379692
2043	24.7	11.0	2.0	chr15	92332322	92333008	(9658181)	C	L1ME5	LINE/L1	(176)	6018	5263	1379693
432	20.7	16.8	3.5	chr15	93272058	93272227	(8718962)	+	MIRb	SINE/MIR	7	203	(65)	1381351
1607	15.7	0.0	10.8	chr15	93272435	93272628	(8718561)	C	AluJr	SINE/Alu	(16)	296	136	1381352
11124	9.8	1.8	1.3	chr15	95699988	95701558	(6289631)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1384830
2269	13.9	0.8	1.6	chr15	95701559	95701923	(6289266)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	1384830
19	24.2	0.0	0.0	chr15	95912132	95912175	(6079014)	+	GA-rich	Low_complexity	1	44	(0)	1385106
464	28.3	5.8	7.2	chr15	99384871	99385303	(2605886)	C	LTR33	LTR/ERVL	(0)	515	50	1390048
234	22.0	0.0	0.0	chr15	100535340	100535389	(1455800)	C	L2a	LINE/L2	(0)	3426	3377	1391603
8850	9.9	1.1	0.0	chr15	100793681	100794860	(1196329)	C	THE1D-int	LTR/ERVL-MaLR	(433)	1198	6	1391957
1801	22.4	8.8	7.5	chr15	100794865	100795410	(1195779)	C	MLT2B3	LTR/ERVL	(0)	554	1	1391958
364	29.4	10.9	4.4	chr15	101300224	101300429	(690760)	+	L1M2	LINE/L1	3077	3297	(2846)	1392612
1265	12.9	4.1	0.5	chr15	101300696	101300905	(690284)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1392613
604	27.0	9.1	1.5	chr15	101377393	101377595	(613594)	+	MIR	SINE/MIR	28	247	(15)	1392713
6634	10.8	2.8	0.3	chr15	101596517	101597617	(393572)	C	L1PB1	LINE/L1	(4546)	2317	1193	1392991
1112	17.0	0.0	0.0	chr15	101597621	101597814	(393375)	C	L1PB1	LINE/L1	(6669)	194	1	1392991
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
564	11.8	0.0	0.0	chr16	1398215	1398290	(88940055)	+	AluYi6	SINE/Alu	220	295	(16)	1395845
778	25.7	9.0	9.2	chr16	1503558	1503849	(88834496)	+	L1MB3	LINE/L1	5826	6134	(49)	1396016
1794	15.3	3.3	2.0	chr16	1503850	1504150	(88834195)	+	AluJo	SINE/Alu	1	305	(7)	1396018
263	34.2	1.8	2.7	chr16	2128562	2128672	(88209673)	+	MIRb	SINE/MIR	122	231	(37)	1396912
1145	13.5	0.0	0.0	chr16	2128713	2128868	(88209477)	C	AluSx3	SINE/Alu	(20)	291	136	1396913
809	15.3	6.9	9.4	chr16	3365889	3366112	(86972233)	+	MER20	DNA/hAT-Charlie	1	218	(1)	1399060
2341	8.4	0.0	2.2	chr16	3366186	3366496	(86971849)	C	AluY	SINE/Alu	(7)	304	1	1399061
1669	14.6	1.4	3.1	chr16	4129841	4130167	(86208178)	C	AluJo	SINE/Alu	(0)	312	1	1400498
1969	15.6	4.7	2.2	chr16	5281987	5282341	(85056004)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1402947
11000	10.3	2.0	2.8	chr16	5282342	5283934	(85054411)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1402947
2228	14.4	0.3	0.0	chr16	8201086	8201391	(82136954)	C	AluSx1	SINE/Alu	(5)	307	1	1408540
484	33.2	7.2	5.8	chr16	8689452	8689940	(81648405)	C	L2c	LINE/L2	(8)	3418	2875	1409615
399	31.9	2.5	1.9	chr16	8690287	8690446	(81647899)	C	MIRb	SINE/MIR	(35)	233	73	1409616
2071	14.8	0.0	0.3	chr16	9038899	9039195	(81299150)	C	AluSx1	SINE/Alu	(16)	296	1	1410409
28	20.6	0.0	2.7	chr16	9039196	9039217	(81299128)	+	(TTTC)n	Simple_repeat	2	22	(0)	1410410
243	26.7	12.6	0.0	chr16	9039241	9039330	(81299015)	+	L2c	LINE/L2	3231	3333	(54)	1410411
34	0.0	0.0	0.0	chr16	9039371	9039399	(81298946)	+	(AG)n	Simple_repeat	1	29	(0)	1410412
887	17.2	0.6	0.6	chr16	9039542	9039698	(81298647)	+	AluJb	SINE/Alu	156	312	(0)	1410413
763	21.7	15.8	2.5	chr16	9154102	9154385	(81183960)	C	MLT1C	LTR/ERVL-MaLR	(114)	353	25	1410699
13	14.7	3.3	0.0	chr16	10653225	10653254	(79685091)	+	(CCTGC)n	Simple_repeat	1	31	(0)	1413942
2108	10.1	0.3	2.9	chr16	11156080	11156387	(79181958)	+	AluSx	SINE/Alu	1	300	(12)	1415013
2007	10.9	1.0	0.7	chr16	11536314	11536606	(78801739)	C	AluSx4	SINE/Alu	(16)	294	1	1415914
2348	20.1	10.7	3.1	chr16	11536607	11536640	(78801705)	C	MER76	LTR/ERVL	(658)	33	2	1415913
348	33.2	4.1	3.6	chr16	13050078	13050296	(77288049)	+	L1ME4a	LINE/L1	5835	6054	(70)	1419272
448	28.1	8.9	0.8	chr16	13727679	13727832	(76610513)	C	MIRb	SINE/MIR	(76)	192	19	1420737
2485	4.3	0.0	0.3	chr16	14321171	14321471	(76016874)	C	AluYf1	SINE/Alu	(11)	300	1	1421852
336	24.8	5.5	2.4	chr16	14321673	14321798	(76016547)	+	MLT1K	LTR/ERVL-MaLR	144	270	(325)	1421853
9910	11.9	3.2	0.4	chr16	15980732	15982256	(74356089)	C	THE1C-int	LTR/ERVL-MaLR	(11)	1569	1	1425762
2402	13.6	2.1	2.9	chr16	15982257	15982634	(74355711)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1425762
2226	16.3	4.1	10.9	chr16	19389764	19389850	(70948495)	+	LOR1b	LTR/ERV1	1	76	(385)	1433456
255	29.3	2.4	0.0	chr16	19717753	19717834	(70620511)	C	MIRb	SINE/MIR	(155)	113	30	1434174
345	22.7	6.0	6.8	chr16	19886270	19886387	(70451958)	+	L2a	LINE/L2	3304	3420	(6)	1434582
427	29.6	3.9	4.4	chr16	19886480	19886659	(70451686)	+	MIR	SINE/MIR	84	262	(0)	1434583
2302	19.7	5.9	0.2	chr16	20560243	20560644	(69777701)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1436102
2238	19.4	0.7	0.0	chr16	20560645	20561051	(69777294)	+	MSTB-int	LTR/ERVL-MaLR	1	410	(1241)	1436102
322	26.3	2.6	3.4	chr16	23453366	23453391	(66884954)	C	SVA_A	Retroposon/SVA	(1035)	352	236	1442306
694	10.9	0.0	0.0	chr16	23453392	23453483	(66884862)	+	AluJr	SINE/Alu	8	99	(213)	1442307
270	20.8	0.0	0.0	chr16	23453505	23453552	(66884793)	C	AluJo	SINE/Alu	(59)	253	206	1442308
1702	19.8	0.0	1.3	chr16	24507811	24508123	(65830222)	+	AluJr	SINE/Alu	2	310	(2)	1444875
726	28.1	12.1	7.1	chr16	24508124	24508342	(65830003)	C	LTR16C	LTR/ERVL	(223)	266	14	1444872
1914	16.4	0.0	1.7	chr16	24508385	24508683	(65829662)	C	AluJr	SINE/Alu	(18)	294	1	1444876
1519	32.6	10.1	1.9	chr16	24630672	24631261	(65707084)	+	MER115	DNA/hAT-Tip100	37	680	(13)	1445146
1390	29.5	10.8	4.7	chr16	24631277	24631489	(65706856)	+	L2a	LINE/L2	1992	2238	(1181)	1445142
2290	13.5	0.0	0.0	chr16	24631490	24631800	(65706545)	+	AluSz6	SINE/Alu	1	311	(1)	1445147
2914	26.4	7.9	6.8	chr16	25512000	25512387	(64825958)	C	MLT1H1-int	LTR/ERVL-MaLR	(668)	741	349	1447158
31	0.0	0.0	0.0	chr16	25512388	25512416	(64825929)	+	(T)n	Simple_repeat	1	29	(0)	1447161
2914	26.4	7.9	6.8	chr16	25512417	25512771	(64825574)	C	MLT1H1-int	LTR/ERVL-MaLR	(1061)	348	3	1447158
284	17.0	0.8	0.8	chr16	25512775	25512869	(64825476)	C	MLT1H1	LTR/ERVL-MaLR	(33)	558	453	1447158
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
256	36.5	2.8	1.4	chr16	26016792	26016930	(64321415)	+	MLT1I	LTR/ERVL-MaLR	1	141	(307)	1448182
322	30.4	2.6	0.9	chr16	26017043	26017155	(64321190)	+	MLT1I	LTR/ERVL-MaLR	282	396	(15)	1448182
1267	27.2	3.0	0.0	chr16	26017169	26017517	(64320828)	+	MLT1I-int	LTR/ERVL-MaLR	1	360	(1027)	1448182
452	28.0	11.9	2.5	chr16	27444855	27445052	(62893293)	C	MIRb	SINE/MIR	(14)	254	36	1451170
1732	17.2	0.0	4.4	chr16	27690390	27690413	(62647932)	+	AluJb	SINE/Alu	283	306	(6)	1451723
366	26.2	4.1	6.6	chr16	27690414	27690533	(62647812)	C	MLT1H2	LTR/ERVL-MaLR	(417)	132	13	1451722
671	28.1	4.1	2.6	chr16	27690781	27691047	(62647298)	C	MER102b	DNA/hAT-Charlie	(64)	277	7	1451725
782	19.0	1.4	0.0	chr16	27812358	27812499	(62525846)	C	MER58A	DNA/hAT-Charlie	(0)	224	81	1451982
267	18.0	2.0	0.0	chr16	27812563	27812612	(62525733)	+	MER5B	DNA/hAT-Charlie	1	51	(127)	1451983
191	10.7	0.0	0.0	chr16	27812639	27812666	(62525679)	C	MER5B	DNA/hAT-Charlie	(150)	28	1	1451984
15	17.0	0.0	0.0	chr16	27812745	27812777	(62525568)	+	(TTTTGT)n	Simple_repeat	1	33	(0)	1451985
2112	12.0	2.9	0.0	chr16	27812780	27813079	(62525266)	C	AluSz	SINE/Alu	(3)	309	1	1451986
484	23.5	1.5	4.3	chr16	28567242	28567379	(61770966)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	275	1453876
906	15.7	4.8	0.0	chr16	28567326	28567484	(61770861)	+	MLT1A0	LTR/ERVL-MaLR	242	408	(0)	1453877
2202	13.8	2.7	0.0	chr16	28567484	28567844	(61770501)	+	MLT1A0-int	LTR/ERVL-MaLR	2	372	(1363)	1453877
1236	23.9	3.9	9.6	chr16	28567868	28568030	(61770315)	C	LTR56	LTR/ERV1	(2)	443	280	1453878
291	26.6	41.5	0.0	chr16	29821656	29821819	(60516526)	+	MIRb	SINE/MIR	28	260	(8)	1456631
863	12.0	0.0	0.0	chr16	29821944	29822060	(60516285)	+	AluJr	SINE/Alu	1	117	(195)	1456632
17	4.9	0.0	0.0	chr16	29822083	29822103	(60516242)	+	(T)n	Simple_repeat	1	21	(0)	1456633
253	35.3	13.5	6.5	chr16	30408369	30408553	(59929792)	C	L2b	LINE/L2	(29)	3346	3147	1457957
509	27.5	16.4	0.0	chr16	30408579	30408771	(59929574)	C	MIR	SINE/MIR	(0)	262	32	1457958
988	17.2	5.1	0.6	chr16	30408805	30408973	(59929372)	C	AluJb	SINE/Alu	(2)	310	134	1457959
1075	11.5	0.0	3.6	chr16	30747851	30748015	(59590330)	+	AluJr	SINE/Alu	137	295	(17)	1458788
10284	10.4	0.9	0.5	chr16	31579775	31581270	(58757075)	C	THE1B-int	LTR/ERVL-MaLR	(78)	1502	1	1460584
2394	11.5	1.9	3.0	chr16	31581271	31581638	(58756707)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1460584
2237	13.7	1.9	3.0	chr16	31779522	31779889	(58558456)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1460779
10970	11.2	1.7	0.0	chr16	31779890	31781442	(58556903)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1460779
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
404	19.2	1.4	0.0	chr16	34062434	34062506	(56275839)	+	AluSz6	SINE/Alu	225	298	(14)	1463557
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
23689	17.1	0.7	0.1	chr16	35897578	35901340	(54437005)	C	HERVS71-int	LTR/ERV1	(69)	8909	5123	1465246
10624	12.7	2.3	0.1	chr16	47791373	47792966	(42545379)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	1467642
1693	16.5	15.2	2.7	chr16	47792969	47793341	(42545004)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1467643
2137	22.0	3.8	2.4	chr16	49647366	49647863	(40690482)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1470855
2455	26.2	11.2	9.0	chr16	49647864	49648360	(40689985)	+	MLT1D-int	LTR/ERVL-MaLR	1	429	(1060)	1470855
1055	18.1	0.0	0.0	chr16	50007598	50007763	(40330582)	+	AluJb	SINE/Alu	136	301	(11)	1471586
812	13.9	0.0	0.0	chr16	50007764	50007885	(40330460)	+	THE1D	LTR/ERVL-MaLR	260	381	(0)	1471584
12061	10.2	0.5	0.4	chr16	50007886	50009514	(40328831)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1471584
451	30.5	7.2	1.8	chr16	50528994	50529163	(39809182)	C	MIR3	SINE/MIR	(18)	190	11	1472680
279	19.7	3.8	3.8	chr16	50529410	50529488	(39808857)	C	MLT1K	LTR/ERVL-MaLR	(9)	586	508	1472681
830	20.4	1.8	2.4	chr16	53711930	53712096	(36626249)	+	AluJo	SINE/Alu	121	286	(26)	1478295
220	17.6	10.5	0.0	chr16	55501874	55501924	(34836421)	+	L2c	LINE/L2	3330	3386	(1)	1481555
16670	16.6	4.6	1.2	chr16	55920652	55925781	(34412564)	+	L1MA4	LINE/L1	2007	7334	(385)	1482241
4133	20.3	0.5	5.2	chr16	56081661	56082508	(34255837)	C	MLT1A0-int	LTR/ERVL-MaLR	(927)	808	1	1482490
2221	17.3	0.0	0.0	chr16	56082519	56082871	(34255474)	C	MLT1A0	LTR/ERVL-MaLR	(10)	355	3	1482490
11924	8.8	2.0	0.1	chr16	56379444	56380994	(33957351)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1482962
2478	9.2	4.9	2.5	chr16	56380995	56381349	(33956996)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1482962
5601	15.9	4.2	0.9	chr16	56381350	56382004	(33956341)	+	L1MC1	LINE/L1	5822	6506	(2)	1482957
11324	9.7	1.1	0.5	chr16	69635847	69637415	(20700930)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1506248
2455	10.2	0.8	0.6	chr16	69637416	69637769	(20700576)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1506248
1929	15.8	0.0	0.0	chr16	73141399	73141689	(17196656)	C	AluJr	SINE/Alu	(13)	299	9	1512509
373	18.8	4.0	13.8	chr16	73141690	73141808	(17196537)	C	MIRb	SINE/MIR	(62)	206	99	1512508
2164	9.1	1.4	0.4	chr16	73686116	73686391	(16651954)	C	AluSg7	SINE/Alu	(30)	279	1	1513377
376	30.7	6.3	4.0	chr16	73686392	73686477	(16651868)	+	MER103C	DNA/hAT-Charlie	213	292	(5)	1513375
2348	8.8	0.7	0.0	chr16	74726391	74726685	(15611660)	C	AluSq2	SINE/Alu	(15)	298	2	1515318
16	0.0	0.0	0.0	chr16	75346721	75346737	(14991608)	+	(A)n	Simple_repeat	1	17	(0)	1516580
22	7.7	2.2	4.3	chr16	75347045	75347062	(14991283)	+	(AAAAAAG)n	Simple_repeat	1	17	(0)	1516581
2240	12.5	0.3	0.3	chr16	75347063	75347373	(14990972)	+	AluSx3	SINE/Alu	1	311	(0)	1516582
428	6.6	0.0	20.0	chr16	76768496	76768590	(13569755)	+	MADE1	DNA/TcMar-Mariner	1	76	(4)	1518819
34	34.8	3.7	2.0	chr16	78398943	78399185	(11939160)	+	(GGAT)n	Simple_repeat	1	252	(0)	1521660
34	17.5	0.0	0.0	chr16	78994935	78994994	(11343351)	+	(T)n	Simple_repeat	1	60	(0)	1522780
28	11.2	0.0	0.0	chr16	82456564	82456603	(7881742)	+	(T)n	Simple_repeat	1	40	(0)	1529249
18	6.4	6.1	0.0	chr16	83802555	83802587	(6535758)	+	(TTTG)n	Simple_repeat	1	35	(0)	1531617
2493	8.3	0.0	0.3	chr16	83816117	83816429	(6521916)	+	AluSx1	SINE/Alu	1	312	(0)	1531643
768	19.6	1.3	0.7	chr16	83816618	83816771	(6521574)	+	MER20	DNA/hAT-Charlie	63	217	(2)	1531644
310	24.7	5.2	0.0	chr16	83816858	83816930	(6521415)	C	MLT1L	LTR/ERVL-MaLR	(533)	77	1	1531642
1957	13.1	0.0	0.7	chr16	84021082	84021364	(6316981)	C	AluSq2	SINE/Alu	(32)	281	1	1532042
4553	26.0	15.1	5.0	chr16	84021365	84021721	(6316624)	C	MSTC-int	LTR/ERVL-MaLR	(1323)	412	2	1532037
2747	14.7	3.0	0.5	chr16	84021724	84022140	(6316205)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1532037
834	28.0	15.4	2.9	chr16	85683199	85683820	(4654525)	+	L2	LINE/L2	2139	2852	(567)	1535201
277	26.6	12.5	3.3	chr16	86165361	86165530	(4172815)	+	MLT1G1	LTR/ERVL-MaLR	23	262	(317)	1536166
301	20.3	1.5	0.0	chr16	86165581	86165644	(4172701)	+	MLT1G1	LTR/ERVL-MaLR	425	489	(0)	1536166
3197	28.9	8.6	3.0	chr16	86165645	86166969	(4171376)	+	MLT1G1-int	LTR/ERVL-MaLR	1	1406	(3)	1536166
17	15.3	0.0	2.6	chr16	89657993	89658030	(680315)	+	G-rich	Low_complexity	1	38	(0)	1541616
204	18.8	5.9	0.0	chr16	89874465	89874512	(463833)	C	MIRb	SINE/MIR	(48)	220	170	1542010
1216	17.0	0.5	3.3	chr16	89874700	89874911	(463434)	C	AluJb	SINE/Alu	(104)	208	3	1542011
2315	9.9	0.3	0.0	chr16	90053527	90053819	(284526)	+	AluSc	SINE/Alu	1	294	(15)	1542294
1410	12.8	1.3	0.8	chr16	90053820	90054056	(284289)	+	MSTA	LTR/ERVL-MaLR	191	428	(0)	1542295
9753	15.4	4.2	0.3	chr16	90054057	90055622	(282723)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1542295
1395	7.0	1.2	0.0	chr17	518623	518793	(82738648)	+	AluSx	SINE/Alu	137	309	(3)	1545300
2285	11.8	0.0	0.0	chr17	2875062	2875366	(80382075)	C	AluSq2	SINE/Alu	(8)	305	1	1550153
953	23.9	11.5	6.7	chr17	2875367	2875676	(80381765)	C	LTR56	LTR/ERV1	(110)	335	2	1550152
250	35.0	0.0	1.9	chr17	2875805	2875909	(80381532)	+	L2b	LINE/L2	2409	2511	(908)	1550154
15	17.2	2.4	2.4	chr17	4671712	4671752	(78585689)	+	(CTCTGT)n	Simple_repeat	1	42	(0)	1553513
15	19.9	0.0	0.0	chr17	7115011	7115045	(76142396)	+	(TCCC)n	Simple_repeat	1	35	(0)	1558253
1385	16.1	28.8	1.6	chr17	7522858	7523170	(75734271)	C	MER61B	LTR/ERV1	(29)	398	1	1558985
194	27.9	2.5	8.1	chr17	7523178	7523263	(75734178)	+	MamRTE1	LINE/RTE-BovB	2003	2083	(1729)	1558986
9153	12.0	2.7	4.4	chr17	7523264	7523481	(75733960)	C	MER61-int	LTR/ERV1	(87)	5130	4927	1558985
2161	13.4	1.9	0.0	chr17	8130052	8130357	(75127084)	+	AluSx	SINE/Alu	1	312	(0)	1560148
884	28.2	8.1	6.5	chr17	8130358	8130510	(75126931)	C	L2a	LINE/L2	(1154)	2265	2107	1560139
1169	13.7	7.0	0.0	chr17	8130513	8130739	(75126702)	+	L1MA7	LINE/L1	6046	6289	(2)	1560149
591	27.1	1.3	1.9	chr17	10741624	10741777	(72515664)	+	MIRb	SINE/MIR	41	193	(75)	1565177
4094	26.9	10.0	4.6	chr17	11059595	11061181	(72196260)	C	MSTC-int	LTR/ERVL-MaLR	(0)	1580	2	1565783
2134	20.1	2.1	3.9	chr17	11061186	11061619	(72195822)	C	MSTC	LTR/ERVL-MaLR	(2)	426	1	1565783
11033	11.6	3.2	3.4	chr17	12807736	12809319	(70448122)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1568695
2565	10.4	5.2	1.4	chr17	12809320	12809669	(70447772)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1568695
9507	12.6	8.3	0.3	chr17	13138201	13139700	(70117741)	+	THE1C-int	LTR/ERVL-MaLR	1	1631	(0)	1569297
10666	11.6	4.1	3.7	chr17	13769351	13770923	(69486518)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1570323
2486	11.1	1.1	6.8	chr17	13770924	13771153	(69486288)	C	THE1C	LTR/ERVL-MaLR	(0)	375	153	1570323
11877	9.6	1.7	0.9	chr17	14167880	14169497	(69087944)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	1570996
868	5.7	0.0	0.0	chr17	14169498	14169602	(69087839)	C	THE1D	LTR/ERVL-MaLR	(0)	381	277	1570996
202	28.4	4.3	0.0	chr17	15424364	15424430	(67833011)	+	MIR3	SINE/MIR	98	167	(41)	1573018
369	33.3	1.9	1.9	chr17	15424511	15424669	(67832772)	C	MARNA	DNA/TcMar-Mariner	(388)	198	40	1573019
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1915	19.6	0.3	0.0	chr17	32356901	32357201	(50900240)	+	AluJb	SINE/Alu	1	302	(10)	1596638
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
473	30.4	5.7	1.6	chr17	33527759	33527942	(49729499)	+	MIR3	SINE/MIR	5	196	(12)	1598838
10416	10.5	3.6	4.8	chr17	33957733	33959331	(49298110)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1599632
2083	17.2	4.4	3.3	chr17	33959333	33959875	(49297566)	C	MLT2A2	LTR/ERVL	(1)	553	3	1599633
588	28.5	3.8	0.6	chr17	37775855	37776034	(45481407)	C	L1ME4c	LINE/L1	(367)	463	278	1606524
4494	10.9	1.3	0.2	chr17	37804328	37804954	(45452487)	C	MER41B	LTR/ERV1	(0)	634	1	1606574
321	29.0	9.3	1.1	chr17	37805453	37805630	(45451811)	C	MLT1L	LTR/ERVL-MaLR	(401)	194	1	1606570
336	26.9	1.3	0.0	chr17	41705345	41705422	(41552019)	+	L2a	LINE/L2	3348	3426	(0)	1614102
14	15.6	0.0	0.0	chr17	41705425	41705453	(41551988)	+	(ATGA)n	Simple_repeat	1	29	(0)	1614103
2105	12.1	3.3	0.3	chr17	41920318	41920615	(41336826)	+	AluSz6	SINE/Alu	1	307	(5)	1614564
423	30.2	4.8	1.6	chr17	41930142	41930323	(41327118)	C	MIRc	SINE/MIR	(58)	210	20	1614595
946	16.8	0.0	0.0	chr17	42403074	42403228	(40854213)	C	AluJr	SINE/Alu	(18)	294	140	1615565
21	23.8	3.9	4.7	chr17	42423106	42423207	(40834234)	+	(GGAGCG)n	Simple_repeat	1	106	(0)	1615601
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
2299	10.2	0.0	0.6	chr17	43322194	43322506	(39934935)	+	AluSc8	SINE/Alu	1	311	(0)	1617603
2143	9.5	0.3	2.0	chr17	43322518	43322823	(39934618)	+	AluSp	SINE/Alu	9	309	(4)	1617604
16	23.3	0.0	0.0	chr17	44308206	44308240	(38949201)	+	G-rich	Low_complexity	1	35	(0)	1619669
2610	5.5	0.0	0.3	chr17	45989369	45989677	(37267764)	+	AluY	SINE/Alu	1	308	(3)	1623173
14	0.0	3.1	9.1	chr17	45989840	45989875	(37267566)	+	(TTTTA)n	Simple_repeat	1	33	(0)	1623174
307	34.0	8.1	3.6	chr17	45990143	45990307	(37267134)	C	Charlie15a	DNA/hAT-Charlie	(15)	209	37	1623175
1887	10.8	6.4	2.8	chr17	45990332	45990617	(37266824)	+	AluSz6	SINE/Alu	1	297	(15)	1623176
6706	5.1	1.4	0.9	chr17	46534195	46535048	(36722393)	C	SVA_C	Retroposon/SVA	(0)	1384	527	1624266
687	31.5	6.9	8.4	chr17	47768492	47768784	(35488657)	C	L1M5	LINE/L1	(1587)	4559	4267	1626700
279	34.7	8.4	3.9	chr17	47768840	47769043	(35488398)	+	MLT1K	LTR/ERVL-MaLR	140	353	(242)	1626702
232	18.3	13.0	0.0	chr17	47769200	47769259	(35488182)	+	MLT1K	LTR/ERVL-MaLR	469	537	(5)	1626702
442	33.9	7.8	8.4	chr17	47834591	47835018	(35422423)	C	L3b	LINE/CR1	(22)	5210	4786	1626811
2495	15.7	4.0	0.2	chr17	49079790	49080199	(34177242)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1629171
395	26.8	0.7	7.2	chr17	49080200	49080264	(34177177)	C	L2a	LINE/L2	(1327)	2092	2032	1629166
1990	11.6	5.9	0.0	chr17	49321261	49321422	(33936019)	C	AluSx1	SINE/Alu	(9)	303	142	1629689
26	0.0	0.0	0.0	chr17	49321423	49321447	(33935994)	+	(T)n	Simple_repeat	1	25	(0)	1629690
1990	11.6	5.9	0.0	chr17	49321448	49321569	(33935872)	C	AluSx1	SINE/Alu	(184)	128	1	1629689
283	23.5	1.4	2.9	chr17	49321578	49321647	(33935794)	+	MLT1I	LTR/ERVL-MaLR	342	410	(1)	1629687
745	30.5	6.5	2.7	chr17	49321657	49321993	(33935448)	+	MLT1I-int	LTR/ERVL-MaLR	12	362	(1025)	1629687
11375	14.2	3.4	6.6	chr17	49421225	49421555	(33835886)	C	L1MA4A	LINE/L1	(3268)	3937	3580	1629903
2055	15.2	0.3	0.3	chr17	49421556	49421858	(33835583)	C	AluJb	SINE/Alu	(9)	303	1	1629914
11375	13.8	0.9	3.0	chr17	49422487	49423059	(33834382)	C	L1MA4A	LINE/L1	(3942)	3263	2702	1629903
1259	22.1	0.0	0.0	chr17	49423071	49423283	(33834158)	C	AluJb	SINE/Alu	(27)	285	73	1629916
1031	25.6	1.2	0.4	chr17	49446846	49447096	(33810345)	+	MIR	SINE/MIR	10	262	(0)	1629962
460	30.4	12.9	3.9	chr17	49447113	49447374	(33810067)	C	L2c	LINE/L2	(32)	3343	3070	1629963
2344	10.2	0.7	0.0	chr17	49447375	49447679	(33809762)	+	AluSx1	SINE/Alu	1	307	(5)	1629964
47	0.0	0.0	0.0	chr17	49763124	49763163	(33494278)	+	(AC)n	Simple_repeat	1	40	(0)	1630518
12	31.4	4.5	0.0	chr17	49763533	49763599	(33493842)	+	(CCCTCAC)n	Simple_repeat	1	70	(0)	1630519
214	31.8	3.3	1.1	chr17	50846382	50846470	(32410971)	C	MIRb	SINE/MIR	(36)	232	142	1632579
219	20.1	16.3	0.0	chr17	50846489	50846575	(32410866)	+	L2b	LINE/L2	3281	3387	(0)	1632577
303	29.0	10.7	3.7	chr17	54781894	54782083	(28475358)	C	L2c	LINE/L2	(7)	3380	3176	1638531
1798	23.2	10.1	3.2	chr17	56685755	56686253	(26571188)	+	MLT1F	LTR/ERVL-MaLR	3	539	(9)	1641749
5446	21.4	8.3	6.8	chr17	56686256	56686740	(26570701)	+	MLT1F-int	LTR/ERVL-MaLR	1	510	(979)	1641749
4403	15.3	2.9	1.4	chr17	58854867	58855641	(24401800)	+	L1MCa	LINE/L1	120	906	(5602)	1645913
848	14.1	0.8	1.5	chr17	59848645	59848779	(23408662)	C	FLAM_A	SINE/Alu	(7)	135	2	1648082
1757	13.7	0.0	7.3	chr17	59848848	59849160	(23408281)	C	AluJb	SINE/Alu	(21)	291	2	1648083
181	26.7	5.3	10.0	chr17	59853385	59853484	(23403957)	+	L2c	LINE/L2	3288	3382	(5)	1648093
2130	9.9	3.9	1.3	chr17	60672716	60673019	(22584422)	+	AluSx1	SINE/Alu	1	312	(0)	1649806
1876	12.8	1.3	8.7	chr17	60673020	60673222	(22584219)	+	AluJb	SINE/Alu	119	310	(2)	1649805
2155	8.6	0.0	9.4	chr17	60673231	60673569	(22583872)	+	AluSx4	SINE/Alu	1	307	(3)	1649807
3801	24.2	8.6	8.7	chr17	62941003	62941946	(20315495)	+	L1MEg	LINE/L1	1416	2292	(4448)	1653991
439	26.7	0.7	4.6	chr17	64335001	64335153	(18922288)	+	MER5A	DNA/hAT-Charlie	2	148	(41)	1656349
286	26.0	0.0	4.0	chr17	64335172	64335247	(18922194)	C	MIR3	SINE/MIR	(54)	154	82	1656350
820	17.2	0.7	0.0	chr17	64335291	64335424	(18922017)	+	AluJb	SINE/Alu	170	304	(8)	1656351
1923	17.1	0.0	0.0	chr17	64439308	64439605	(18817836)	C	AluSz	SINE/Alu	(14)	298	1	1656583
8642	10.2	1.3	3.5	chr17	64439606	64439728	(18817713)	C	THE1D-int	LTR/ERVL-MaLR	(1513)	118	1	1656581
2044	10.6	6.0	5.8	chr17	64439729	64439769	(18817672)	C	THE1D	LTR/ERVL-MaLR	(0)	381	352	1656581
2282	11.8	0.7	0.0	chr17	64439770	64440073	(18817368)	+	AluSx1	SINE/Alu	1	306	(6)	1656584
408	31.9	0.7	1.5	chr17	64830403	64830539	(18426902)	C	MIRb	SINE/MIR	(57)	211	76	1657407
4908	12.4	9.2	0.7	chr17	64830611	64831436	(18426005)	+	MER4D	LTR/ERV1	1	903	(0)	1657408
14	18.1	0.0	0.0	chr17	66192029	66192060	(17065381)	+	(CCGCCA)n	Simple_repeat	1	32	(0)	1659801
1969	19.6	4.7	3.5	chr17	66817479	66817937	(16439504)	+	MSTB2	LTR/ERVL-MaLR	1	465	(0)	1660855
1076	20.8	6.8	0.4	chr17	66817940	66818214	(16439227)	+	MSTB2-int	LTR/ERVL-MaLR	2	295	(1440)	1660855
2457	21.5	7.2	4.9	chr17	66818324	66818732	(16438709)	+	MSTB2-int	LTR/ERVL-MaLR	933	1385	(350)	1660855
689	18.4	5.3	6.6	chr17	67862637	67863035	(15394406)	C	MLT1C-int	LTR/ERVL-MaLR	(2)	503	3	1662987
1637	18.1	8.1	4.3	chr17	67863042	67863277	(15394164)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	219	1662987
3910	15.0	1.7	6.6	chr17	68417106	68417733	(14839708)	C	L1PB1	LINE/L1	(5818)	1231	640	1664162
1866	12.6	6.1	0.0	chr17	68417734	68418028	(14839413)	C	AluSx3	SINE/Alu	(0)	311	2	1664164
912	27.0	34.2	4.3	chr17	69859843	69860144	(13397297)	C	L1MEg2	LINE/L1	(5604)	848	436	1666423
1213	28.9	6.1	0.5	chr17	69860346	69860731	(13396710)	C	L1MEg2	LINE/L1	(6034)	418	10	1666423
11433	10.5	0.5	0.2	chr17	70983531	70985106	(12272335)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1668096
2024	16.0	2.2	3.0	chr17	70985112	70985472	(12271969)	C	THE1B	LTR/ERVL-MaLR	(5)	359	2	1668096
10020	12.9	3.5	1.7	chr17	71387289	71388840	(11868601)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	1668703
306	33.1	6.2	4.6	chr17	71389060	71389233	(11868208)	C	MER20B	DNA/hAT-Charlie	(604)	179	3	1668704
1971	13.6	2.8	5.1	chr17	71617579	71617951	(11639490)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1669073
11398	9.5	1.4	2.5	chr17	71617952	71618794	(11638647)	+	THE1B-int	LTR/ERVL-MaLR	1	861	(719)	1669073
2334	12.1	11.0	1.0	chr17	72824073	72824457	(10432984)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1671080
10470	13.8	1.9	0.1	chr17	72824460	72826059	(10431382)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	1671080
233	26.4	7.2	3.2	chr17	72923224	72923317	(10334124)	+	MLT1I	LTR/ERVL-MaLR	75	172	(239)	1671258
1627	33.2	7.6	6.8	chr17	72923449	72923862	(10333579)	+	MLT1I-int	LTR/ERVL-MaLR	2	431	(956)	1671258
194	23.2	0.0	1.8	chr17	73983466	73983522	(9273919)	C	MamRTE1	LINE/RTE-BovB	(3568)	244	189	1673276
17	14.5	2.6	0.0	chr17	73983614	73983651	(9273790)	+	(CCACCC)n	Simple_repeat	1	39	(0)	1673277
2979	0.3	0.0	0.0	chr17	75194601	75194913	(8062528)	+	AluYb8	SINE/Alu	1	313	(5)	1675588
440	22.5	3.0	3.7	chr17	75194914	75195006	(8062435)	C	MIRc	SINE/MIR	(151)	117	26	1675587
38	0.0	0.0	0.0	chr17	75195123	75195155	(8062286)	+	(TG)n	Simple_repeat	1	33	(0)	1675589
257	31.5	8.5	0.9	chr17	75195158	75195266	(8062175)	+	L2a	LINE/L2	3289	3406	(20)	1675590
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
565	31.8	11.8	4.6	chr17	77261305	77261748	(5995693)	C	L1MEi	LINE/L1	(1355)	857	367	1679735
252	26.0	9.7	3.7	chr17	77261806	77261941	(5995500)	C	L1MEi	LINE/L1	(2052)	160	16	1679735
204	25.9	6.5	0.0	chr17	77602845	77602902	(5654539)	+	MIR3	SINE/MIR	114	175	(33)	1680305
191	18.2	0.0	0.0	chr17	77705064	77705096	(5552345)	+	L2b	LINE/L2	3335	3367	(8)	1680499
1288	33.7	6.6	6.0	chr17	80185514	80186535	(3070906)	C	L1MC4	LINE/L1	(201)	7841	6809	1684626
2661	8.5	3.0	0.6	chr17	80604564	80604917	(2652524)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	1685296
219	34.8	10.7	1.2	chr17	80670008	80670167	(2587274)	C	MIR3	SINE/MIR	(2)	206	30	1685393
264	29.3	6.6	1.0	chr17	80670564	80670663	(2586778)	+	L2b	LINE/L2	3222	3327	(48)	1685394
1044	24.9	10.5	10.0	chr17	81223885	81224244	(2033197)	C	L1ME1	LINE/L1	(212)	5967	5582	1686008
2200	12.2	0.6	0.6	chr17	81224245	81224556	(2032885)	+	AluSx	SINE/Alu	1	312	(0)	1686009
659	22.5	4.4	1.7	chr17	81792544	81793663	(1463778)	+	(CA)n	Simple_repeat	1	1175	(0)	1686733
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
659	22.5	4.4	1.7	chr17	81793921	81794546	(1462895)	+	(CA)n	Simple_repeat	1	626	(0)	1686735
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
230	26.7	12.2	0.0	chr17	82423137	82423222	(834219)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	392	1687612
935	17.9	0.0	1.3	chr17	82423382	82423532	(833909)	+	FRAM	SINE/Alu	12	160	(16)	1687613
2483	8.1	0.7	0.0	chr17	82423533	82423841	(833600)	+	AluSx1	SINE/Alu	1	311	(1)	1687614
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
367	27.6	2.2	6.9	chr18	569817	569960	(79803325)	C	MIR	SINE/MIR	(119)	143	7	1690025
1962	14.2	1.0	0.3	chr18	570092	570386	(79802899)	+	AluJo	SINE/Alu	1	297	(15)	1690026
457	20.8	10.1	7.3	chr18	3340883	3340911	(77032374)	+	MER34A1	LTR/ERV1	375	409	(178)	1694185
2569	8.2	2.2	0.3	chr18	3340912	3341267	(77032018)	+	L1PA13	LINE/L1	5801	6163	(0)	1694186
8010	16.4	3.9	5.0	chr18	6549636	6551290	(73821995)	C	MSTB-int	LTR/ERVL-MaLR	(15)	1636	1	1698710
2504	14.2	2.1	3.0	chr18	6551291	6551720	(73821565)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1698710
22	18.8	1.8	1.8	chr18	7117874	7117929	(73255356)	+	(CGCCC)n	Simple_repeat	1	57	(0)	1699531
4353	7.0	0.5	0.0	chr18	9865450	9866004	(70507281)	C	THE1B-int	LTR/ERVL-MaLR	(1019)	561	4	1703770
2154	15.4	1.9	3.8	chr18	9866008	9866378	(70506907)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1703770
2117	12.1	0.0	0.0	chr18	11958078	11958374	(68414911)	+	AluSg	SINE/Alu	1	297	(13)	1706671
227	12.9	0.0	0.0	chr18	11958388	11958418	(68414867)	+	Alu	SINE/Alu	5	35	(98)	1706672
1300	16.7	8.2	0.0	chr18	11958429	11958685	(68414600)	C	LTR35	LTR/ERV1	(167)	441	162	1706673
1735	21.4	10.7	0.8	chr18	12412698	12413183	(67960102)	C	Charlie1a	DNA/hAT-Charlie	(0)	1455	916	1707401
1113	13.2	1.1	2.6	chr18	12413200	12413388	(67959897)	+	AluJo	SINE/Alu	43	228	(84)	1707402
233	26.2	1.6	0.0	chr18	12413428	12413488	(67959797)	C	Charlie1a	DNA/hAT-Charlie	(562)	893	832	1707401
1676	26.7	3.0	6.8	chr18	12413517	12413579	(67959706)	C	Charlie1a	DNA/hAT-Charlie	(757)	698	645	1707401
2172	11.5	0.0	0.0	chr18	12413580	12413883	(67959402)	C	AluSx	SINE/Alu	(8)	304	1	1707403
2077	13.9	7.2	1.5	chr18	20940899	20941240	(59432045)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	1711656
11356	8.9	2.6	0.8	chr18	20941241	20942733	(59430552)	+	THE1B-int	LTR/ERVL-MaLR	1	1534	(46)	1711656
2020	12.9	0.0	0.0	chr18	22055307	22055584	(58317701)	+	AluSx1	SINE/Alu	14	291	(21)	1713841
1894	19.7	10.4	8.3	chr18	22055585	22055687	(58317598)	C	MLT1H-int	LTR/ERVL-MaLR	(1314)	95	1	1713834
1431	27.1	5.3	8.8	chr18	22055688	22055756	(58317529)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	482	1713834
776	16.9	0.8	0.0	chr18	22055757	22055880	(58317405)	+	FLAM_A	SINE/Alu	1	125	(17)	1713842
1431	27.1	5.3	8.8	chr18	22055881	22056380	(58316905)	C	MLT1H	LTR/ERVL-MaLR	(68)	481	1	1713834
2673	6.1	0.0	0.0	chr18	22590060	22590369	(57782916)	C	AluSg	SINE/Alu	(0)	310	1	1714762
2621	27.2	7.6	3.0	chr18	22590370	22590820	(57782465)	+	L2c	LINE/L2	591	1055	(2364)	1714761
218	20.4	0.0	1.8	chr18	26545885	26545939	(53827346)	C	MIR3	SINE/MIR	(74)	134	81	1721095
926	19.4	1.2	1.8	chr18	26712828	26712997	(53660288)	+	AluJr	SINE/Alu	140	308	(4)	1721397
898	11.6	0.0	7.2	chr18	26712999	26713136	(53660149)	+	FLAM_C	SINE/Alu	3	130	(13)	1721398
266	32.5	0.8	2.4	chr18	28001970	28002092	(52371193)	+	Tigger14a	DNA/TcMar-Tigger	1	121	(203)	1723185
1925	16.6	10.4	0.3	chr18	30072400	30072779	(50300506)	+	MSTA	LTR/ERVL-MaLR	4	426	(2)	1725845
8841	17.7	1.5	1.6	chr18	30072782	30073279	(50300006)	+	MSTA-int	LTR/ERVL-MaLR	1	502	(1129)	1725845
1952	18.3	3.8	1.4	chr18	30781431	30781785	(49591500)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1726796
10658	12.0	1.2	1.3	chr18	30781786	30783367	(49589918)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1726796
260	30.4	4.3	5.9	chr18	31436993	31437111	(48936174)	C	L2c	LINE/L2	(0)	3387	3271	1727673
18	24.3	6.3	1.2	chr18	31685553	31685631	(48687654)	+	(CCG)n	Simple_repeat	1	84	(0)	1728041
4887	20.8	3.2	3.3	chr18	32150631	32152546	(48220739)	C	L1MA4	LINE/L1	(3634)	3928	2009	1728959
3795	19.6	0.7	0.3	chr18	32152577	32153281	(48220004)	C	L1MA4	LINE/L1	(4620)	1945	1238	1728959
2523	9.6	0.3	1.7	chr18	33339564	33339923	(47033362)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1730595
11420	9.7	0.9	0.0	chr18	33339924	33341480	(47031805)	+	THE1A-int	LTR/ERVL-MaLR	1	1572	(8)	1730595
17	22.0	2.0	2.0	chr18	33440758	33440807	(46932478)	+	(GCG)n	Simple_repeat	1	51	(0)	1730735
1981	13.9	11.5	1.6	chr18	33560623	33561014	(46812271)	C	MER61C	LTR/ERV1	(0)	428	4	1730886
24321	11.6	2.6	1.4	chr18	33561024	33561050	(46812235)	C	MER61-int	LTR/ERV1	(11)	5206	5159	1730886
94	0.0	0.0	0.0	chr18	33561051	33561132	(46812153)	+	(ATAAGG)n	Simple_repeat	1	82	(0)	1730887
24321	11.6	2.6	1.4	chr18	33561133	33563962	(46809323)	C	MER61-int	LTR/ERV1	(59)	5158	2307	1730886
1281	30.4	8.1	4.5	chr18	34297162	34297869	(46075416)	C	MLT1I-int	LTR/ERVL-MaLR	(187)	1222	507	1731756
763	35.5	1.3	0.5	chr18	34297885	34298277	(46075008)	C	MLT1I-int	LTR/ERVL-MaLR	(990)	397	2	1731756
680	35.7	5.8	2.4	chr18	34298292	34298621	(46074664)	C	MLT1I	LTR/ERVL-MaLR	(13)	398	57	1731756
9653	13.6	3.1	2.4	chr18	34462720	34464288	(45908997)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	1731990
1940	13.5	6.8	1.1	chr18	34464289	34464647	(45908638)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1731990
3548	19.1	7.3	0.4	chr18	35278356	35279178	(45094107)	C	MLT1C-int	LTR/ERVL-MaLR	(484)	887	3	1733096
1325	20.9	5.7	0.6	chr18	35279179	35279500	(45093785)	C	MLT1C	LTR/ERVL-MaLR	(40)	427	88	1733096
1886	17.6	1.1	0.8	chr18	35279501	35279855	(45093430)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	10	1733097
8708	12.0	11.4	0.8	chr18	36241153	36242553	(44130732)	C	THE1D-int	LTR/ERVL-MaLR	(60)	1571	3	1734529
2301	12.2	7.6	0.6	chr18	36242556	36242909	(44130376)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1734529
2398	22.0	4.8	2.7	chr18	37770132	37770686	(42602599)	C	MLT1J-int	LTR/ERVL-MaLR	(922)	567	1	1736505
238	21.3	0.0	0.0	chr18	37770689	37770735	(42602550)	C	MLT2F	LTR/ERVL	(2)	561	515	1736506
21	20.3	0.0	0.0	chr18	37770743	37770783	(42602502)	+	(TA)n	Simple_repeat	1	41	(0)	1736507
600	23.8	17.6	8.2	chr18	37770786	37771308	(42601977)	C	MLT2F	LTR/ERVL	(43)	620	3	1736508
7664	12.9	15.7	0.7	chr18	39235173	39236510	(41136775)	+	LTR12C	LTR/ERV1	3	1579	(0)	1738434
11760	9.4	0.5	0.2	chr18	41813032	41814604	(38558681)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	2	1741899
1719	13.7	15.9	1.9	chr18	41814606	41814917	(38558368)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1741899
19	12.8	0.0	0.0	chr18	47931271	47931304	(32441981)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1751016
1138	26.8	10.8	3.6	chr18	48621956	48622566	(31750719)	C	L2a	LINE/L2	(2077)	1342	683	1752205
1562	18.7	5.1	0.8	chr18	50173868	50174170	(30199115)	+	MLT2B2	LTR/ERVL	3	335	(266)	1754724
376	16.1	13.9	0.0	chr18	50174171	50174257	(30199028)	C	Ricksha_c	DNA/MULE-MuDR	(1134)	914	814	1754725
275	30.6	19.1	0.0	chr18	50174433	50174602	(30198683)	+	MIRc	SINE/MIR	45	254	(14)	1754726
1980	21.4	12.8	5.4	chr18	50754336	50754868	(29618417)	+	MLT1G	LTR/ERVL-MaLR	3	580	(11)	1755685
595	22.2	0.8	0.0	chr18	50755069	50755194	(29618091)	+	LTR67B	LTR/ERVL	494	620	(0)	1755686
336	23.7	7.3	4.2	chr18	50755255	50755373	(29617912)	+	MLT1N2	LTR/ERVL-MaLR	440	562	(0)	1755687
1010	25.0	8.8	3.6	chr18	51399897	51400335	(28972950)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	33	1756914
2625	9.1	3.0	0.0	chr18	51928849	51929201	(28444084)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1757702
10210	10.5	3.9	3.9	chr18	51929202	51930781	(28442504)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1757702
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1795	11.5	0.4	5.8	chr18	57630669	57630963	(22742322)	+	AluJb	SINE/Alu	4	282	(30)	1765873
2466	8.7	0.6	0.3	chr18	63759620	63759967	(16613318)	+	THE1A	LTR/ERVL-MaLR	7	355	(0)	1775572
11984	8.7	0.5	0.1	chr18	63759968	63761537	(16611748)	+	THE1A-int	LTR/ERVL-MaLR	1	1576	(4)	1775572
2183	12.9	4.4	2.0	chr18	69359602	69359956	(11013329)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1783095
11392	9.9	0.8	1.4	chr18	69359957	69361230	(11012055)	+	THE1B-int	LTR/ERVL-MaLR	1	1284	(296)	1783095
892	11.2	27.6	0.0	chr18	72712118	72712393	(7660892)	C	THE1B-int	LTR/ERVL-MaLR	(0)	355	4	1787600
2051	10.2	7.7	3.2	chr18	72712394	72712738	(7660547)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	1787600
10652	12.1	0.6	2.6	chr18	72956818	72958428	(7414857)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1787898
2416	13.0	0.6	0.3	chr18	72958430	72958791	(7414494)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	1787898
8928	20.0	0.9	0.4	chr18	75100513	75102155	(5271130)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	1790627
1212	14.8	4.3	1.7	chr18	75102156	75102516	(5270769)	C	MSTB	LTR/ERVL-MaLR	(5)	421	1	1790627
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
311	26.0	0.9	8.9	chr19	602099	602470	(58015146)	+	TAR1	Satellite/telo	1093	1434	(677)	1797209
13	10.8	3.1	3.0	chr19	602658	602689	(58014927)	+	(TCCTG)n	Simple_repeat	1	33	(0)	1797210
307	32.3	2.0	0.0	chr19	667622	667720	(57949896)	C	MIR	SINE/MIR	(73)	189	89	1797328
1856	12.2	0.7	7.2	chr19	667942	668089	(57949527)	+	AluSz	SINE/Alu	1	134	(178)	1797329
2000	12.4	2.8	0.3	chr19	1535607	1535888	(57081728)	+	AluJb	SINE/Alu	7	295	(17)	1798955
422	26.0	8.9	0.7	chr19	1535890	1536044	(57081572)	+	MLT1J-int	LTR/ERVL-MaLR	6	174	(1213)	1798956
2428	9.2	0.0	0.3	chr19	1536120	1536425	(57081191)	+	AluSx1	SINE/Alu	1	305	(7)	1798957
385	31.8	12.3	1.2	chr19	3790479	3790789	(54826827)	+	L2c	LINE/L2	2820	3159	(228)	1804028
344	31.5	9.5	3.4	chr19	3790922	3791128	(54826488)	+	MLT1K	LTR/ERVL-MaLR	374	594	(1)	1804029
14	3.7	6.9	0.0	chr19	3791336	3791351	(54826265)	+	(CTCCAC)n	Simple_repeat	1	18	(0)	1804030
2273	8.9	1.0	0.0	chr19	3791352	3791642	(54825974)	C	AluSx1	SINE/Alu	(18)	294	1	1804031
564	27.0	1.0	7.8	chr19	4627920	4628136	(53989480)	C	MLT1K	LTR/ERVL-MaLR	(113)	482	281	1806053
2214	10.4	1.3	0.3	chr19	4628361	4628527	(53989089)	C	AluSx	SINE/Alu	(12)	300	134	1806054
60	0.0	0.0	0.0	chr19	6166281	6166331	(52451285)	+	(TG)n	Simple_repeat	1	51	(0)	1809599
876	29.9	10.5	1.6	chr19	6914094	6914467	(51703149)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	1811541
608	25.1	19.8	2.4	chr19	6914635	6915010	(51702606)	C	L2a	LINE/L2	(70)	3356	2888	1811540
635	27.0	31.5	2.9	chr19	6924042	6924497	(51693119)	C	LTR67B	LTR/ERVL	(2)	618	27	1811571
6945	14.3	3.4	2.4	chr19	7755014	7755773	(50861843)	C	L1M2	LINE/L1	(3114)	4448	3679	1813655
379	26.5	11.3	0.0	chr19	8594204	8594342	(50023274)	+	MIRc	SINE/MIR	61	223	(45)	1815669
6953	10.2	2.5	1.1	chr19	9311944	9312935	(49304681)	+	LTR13	LTR/ERVK	2	1007	(0)	1817226
2237	12.0	0.0	0.3	chr19	9575463	9575761	(49041855)	+	AluSg	SINE/Alu	2	299	(11)	1817680
3685	20.0	5.9	11.6	chr19	9575762	9576219	(49041397)	+	L1MA4	LINE/L1	2392	2862	(3284)	1817681
751	19.2	0.0	0.0	chr19	9576220	9576344	(49041272)	+	FLAM_C	SINE/Alu	9	133	(10)	1817682
2280	8.9	1.3	0.0	chr19	11606060	11606363	(47011253)	+	AluSc8	SINE/Alu	1	308	(3)	1822781
9581	10.7	3.7	5.1	chr19	11606364	11607128	(47010488)	C	THE1C-int	LTR/ERVL-MaLR	(327)	1253	497	1822780
2172	10.7	0.0	1.3	chr19	12719514	12719812	(45897804)	+	AluSx3	SINE/Alu	1	295	(16)	1825074
1204	30.3	7.8	1.7	chr19	13576650	13576697	(45040919)	+	L2a	LINE/L2	3383	3426	(0)	1827155
686	21.4	1.2	4.8	chr19	13576724	13576890	(45040726)	C	MIR	SINE/MIR	(4)	258	98	1827157
261	23.9	7.2	4.7	chr19	13576939	13577054	(45040562)	C	MIRb	SINE/MIR	(153)	115	2	1827158
254	34.4	9.2	5.8	chr19	13577119	13577199	(45040417)	+	L2	LINE/L2	2520	2599	(820)	1827159
975	20.2	11.5	20.5	chr19	13577200	13577368	(45040248)	+	Charlie4a	DNA/hAT-Charlie	2	189	(319)	1827160
13	23.6	4.8	3.0	chr19	13795528	13795590	(44822026)	+	(GCGGA)n	Simple_repeat	1	66	(0)	1827824
13	15.4	0.0	3.2	chr19	13795618	13795648	(44821968)	+	(CCCGG)n	Simple_repeat	1	31	(0)	1827825
19	19.1	3.8	6.0	chr19	13795670	13795749	(44821867)	+	G-rich	Low_complexity	1	83	(0)	1827826
2091	11.0	0.0	0.3	chr19	15132945	15133235	(43484381)	+	AluSz6	SINE/Alu	1	290	(22)	1831189
369	20.2	5.7	2.0	chr19	15133303	15133403	(43484213)	+	MLT1J	LTR/ERVL-MaLR	385	489	(23)	1831190
1053	31.1	10.0	11.8	chr19	15133492	15133710	(43483906)	+	MLT1J-int	LTR/ERVL-MaLR	12	240	(1147)	1831190
3465	8.9	0.4	0.0	chr19	15903994	15904444	(42713172)	+	MLT2A2	LTR/ERVL	1	453	(0)	1832764
13892	17.9	3.3	2.0	chr19	15904445	15904469	(42713147)	C	L1M2	LINE/L1	(1147)	6418	6395	1832763
447	0.0	0.0	0.0	chr19	15904470	15904519	(42713097)	+	MLT2A2	LTR/ERVL	512	561	(0)	1832765
13892	17.9	3.3	2.0	chr19	15904520	15904544	(42713072)	C	L1M2	LINE/L1	(1171)	6394	6371	1832763
382	6.0	0.0	0.0	chr19	15904545	15904594	(42713022)	+	MLT2A2	LTR/ERVL	512	561	(0)	1832766
13892	17.9	3.3	2.0	chr19	15904595	15907671	(42709945)	C	L1M2	LINE/L1	(1147)	6370	3297	1832763
230	31.9	0.0	0.0	chr19	16056888	16056959	(42560657)	C	MLT1J2	LTR/ERVL-MaLR	(117)	331	260	1833014
436	24.8	12.5	0.0	chr19	16057272	16057404	(42560212)	+	MLT1J-int	LTR/ERVL-MaLR	3	154	(1233)	1833015
478	25.7	5.3	0.7	chr19	16057492	16057636	(42559980)	C	MLT1J2-int	LTR/ERVL-MaLR	(7)	1380	1229	1833014
232	37.3	4.1	1.7	chr19	17214716	17214835	(41402781)	C	MIR	SINE/MIR	(91)	171	49	1835759
579	13.8	11.2	4.3	chr19	17215131	17215246	(41402370)	C	AluJr	SINE/Alu	(187)	125	1	1835760
245	36.2	0.0	1.7	chr19	17868984	17869101	(40748515)	+	L2b	LINE/L2	2803	2918	(501)	1837478
760	23.5	0.7	0.0	chr19	17869114	17869262	(40748354)	C	AluJb	SINE/Alu	(40)	272	123	1837479
199	33.9	0.0	0.0	chr19	18520495	18520556	(40097060)	C	MIR1_Amn	SINE/MIR	(77)	153	92	1839002
2000	14.2	1.0	1.3	chr19	18831382	18831514	(39786102)	C	AluJb	SINE/Alu	(176)	136	1	1839686
220	14.7	0.0	0.0	chr19	18831566	18831599	(39786017)	C	MIR3	SINE/MIR	(60)	148	115	1839688
208	22.5	0.0	0.0	chr19	18831568	18831607	(39786009)	C	MIRc	SINE/MIR	(119)	149	110	1839689
12	20.2	4.1	3.9	chr19	18831910	18831958	(39785658)	+	(CGACGG)n	Simple_repeat	1	51	(0)	1839690
25	26.8	2.9	2.8	chr19	18831937	18832039	(39785577)	+	(CGG)n	Simple_repeat	1	106	(0)	1839691
16	22.7	3.0	4.3	chr19	18832095	18832161	(39785455)	+	(CCGCGG)n	Simple_repeat	1	69	(0)	1839692
2266	11.3	0.0	0.7	chr19	19235263	19235571	(39382045)	C	AluSx1	SINE/Alu	(5)	307	1	1840572
196	37.2	6.5	0.7	chr19	31313821	31313966	(27303650)	+	MIRc	SINE/MIR	7	161	(107)	1853036
2740	11.4	0.3	0.0	chr19	33586884	33587250	(25030366)	+	MER4A1	LTR/ERV1	105	472	(0)	1856995
2148	11.6	0.7	0.3	chr19	34067130	34067458	(24550158)	C	AluSx	SINE/Alu	(0)	312	2	1857811
1656	29.5	10.3	1.7	chr19	34067459	34067540	(24550076)	+	L2	LINE/L2	2797	2882	(537)	1857809
515	34.9	5.4	0.7	chr19	34067554	34067833	(24549783)	+	L1ME3Cz	LINE/L1	285	578	(419)	1857812
825	13.7	0.0	0.8	chr19	34404033	34404156	(24213460)	+	FLAM_C	SINE/Alu	11	133	(10)	1858560
423	20.0	0.0	0.0	chr19	34404168	34404242	(24213374)	C	L1MC5a	LINE/L1	(635)	2142	2068	1858561
11567	9.2	1.8	0.0	chr19	34509560	34511110	(24106506)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1858782
2092	12.9	3.7	0.9	chr19	34511111	34511455	(24106161)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1858782
831	15.5	1.8	4.8	chr19	34511456	34511494	(24106122)	+	FRAM	SINE/Alu	141	174	(2)	1858781
437	30.3	11.4	3.3	chr19	34511517	34511884	(24105732)	C	L1M5	LINE/L1	(453)	5671	5270	1858783
13742	17.6	0.3	0.0	chr19	34553239	34555420	(24062196)	C	HERVS71-int	LTR/ERV1	(69)	8909	6722	1858839
2252	12.0	0.0	0.0	chr19	35234091	35234391	(23383225)	+	AluSx1	SINE/Alu	1	301	(11)	1860000
286	30.9	3.0	3.0	chr19	35234670	35234769	(23382847)	C	MLT1L-int	LTR/ERVL-MaLR	(1134)	253	154	1859997
251	26.0	3.0	6.8	chr19	35234878	35234920	(23382696)	C	MLT1L	LTR/ERVL-MaLR	(1)	410	370	1859997
2077	11.7	0.0	7.7	chr19	35234921	35235244	(23382372)	+	AluSx	SINE/Alu	2	300	(12)	1860001
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
323	29.4	5.0	6.2	chr19	36465909	36466151	(22151465)	+	L1MEi	LINE/L1	1050	1289	(923)	1862602
264	20.2	4.3	3.3	chr19	36466184	36466275	(22151341)	+	L1M5	LINE/L1	5011	5103	(1043)	1862603
2431	9.5	0.3	1.0	chr19	36666088	36666393	(21951223)	C	AluSp	SINE/Alu	(9)	304	1	1863006
320	20.9	2.9	0.0	chr19	36850363	36850429	(21767187)	C	MER67D	LTR/ERV1	(1)	513	445	1863382
711	18.1	11.3	3.1	chr19	36850413	36850663	(21766953)	C	MER31B	LTR/ERV1	(74)	392	1	1863383
6965	18.3	1.3	1.6	chr19	37303956	37305522	(21312094)	C	SST1	Satellite/centr	(0)	1563	1	1864200
1630	17.6	1.0	4.8	chr19	37720447	37720759	(20896857)	+	AluJr	SINE/Alu	1	301	(11)	1864966
649	27.9	2.4	4.7	chr19	38099666	38099879	(20517737)	C	MIRb	SINE/MIR	(58)	210	2	1865842
545	28.5	15.1	8.2	chr19	38100222	38100661	(20516955)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	67	1865843
1908	12.5	3.7	0.3	chr19	39543742	39544029	(19073587)	+	AluSx	SINE/Alu	1	298	(14)	1869316
757	21.4	8.3	9.5	chr19	39544030	39544158	(19073458)	+	MLT1H	LTR/ERVL-MaLR	347	547	(2)	1869315
2350	28.1	3.1	2.8	chr19	39544172	39544612	(19073004)	+	MLT1H-int	LTR/ERVL-MaLR	1	456	(953)	1869315
1887	13.4	0.0	2.6	chr19	39544613	39544917	(19072699)	C	AluJr	SINE/Alu	(15)	297	1	1869317
389	28.1	14.5	8.5	chr19	40645777	40646142	(17971474)	C	L1ME4a	LINE/L1	(41)	6083	5692	1871602
1549	9.6	17.6	0.4	chr19	40878396	40878635	(17738981)	C	AluSx	SINE/Alu	(22)	290	1	1872149
23	18.7	0.0	0.0	chr19	41352982	41353030	(17264586)	+	(CAGCAG)n	Simple_repeat	1	49	(0)	1873223
600	26.7	19.2	1.5	chr19	42003797	42004244	(16613372)	+	L2a	LINE/L2	2739	3294	(132)	1874346
2449	5.6	0.0	0.0	chr19	42367278	42367564	(16250052)	C	AluY	SINE/Alu	(1)	310	24	1875122
272	29.4	2.4	8.6	chr19	42367679	42367853	(16249763)	C	MLT1O	LTR/ERVL-MaLR	(65)	477	314	1875123
1370	19.6	10.9	1.0	chr19	44425313	44425653	(14191963)	+	MLT1F1	LTR/ERVL-MaLR	55	425	(144)	1878715
234	32.8	10.8	4.5	chr19	44426330	44426871	(14190745)	C	L1ME4a	LINE/L1	(12)	6112	5524	1878716
1192	10.6	0.3	0.0	chr19	44456469	44457877	(14159739)	C	ACRO1	Satellite/acro	(55)	1412	1	1878760
1855	14.0	2.8	0.4	chr19	44676638	44676915	(13940701)	C	AluJb	SINE/Alu	(27)	285	1	1879305
1414	28.8	5.8	4.0	chr19	44676916	44677417	(13940199)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	11	1879304
12	23.6	7.6	1.4	chr19	44844643	44844708	(13772908)	+	(CCCGCCT)n	Simple_repeat	1	71	(0)	1879783
14	18.3	2.7	0.0	chr19	44844880	44844916	(13772700)	+	(AGCCC)n	Simple_repeat	1	38	(0)	1879784
14	26.0	1.9	1.9	chr19	44844984	44845035	(13772581)	+	G-rich	Low_complexity	1	53	(0)	1879785
1468	12.4	1.9	0.5	chr19	45150099	45150308	(13467308)	C	AluSx3	SINE/Alu	(17)	294	82	1880568
439	29.9	10.0	3.0	chr19	45150558	45150826	(13466790)	C	MLT1K	LTR/ERVL-MaLR	(209)	386	97	1880569
184	17.0	0.0	11.7	chr19	45353413	45353472	(13264144)	+	MIR3	SINE/MIR	102	154	(54)	1881078
687	14.6	0.0	1.0	chr19	46306473	46306576	(12311040)	C	U6	snRNA	(3)	104	2	1883333
269	22.4	6.9	0.0	chr19	46306748	46306814	(12310802)	C	MIRb	SINE/MIR	(142)	126	55	1883334
661	31.5	10.6	1.0	chr19	46307005	46307318	(12310298)	+	L2a	LINE/L2	3027	3374	(52)	1883335
17	23.2	2.3	6.8	chr19	46661072	46661157	(11956459)	+	(GCCC)n	Simple_repeat	1	88	(0)	1884229
242	34.1	0.0	9.2	chr19	47823595	47823649	(10793967)	+	MIR3	SINE/MIR	9	52	(156)	1887158
2481	7.8	0.0	0.0	chr19	48110067	48110375	(10507241)	+	AluSg	SINE/Alu	2	310	(0)	1887970
942	18.4	16.0	12.0	chr19	48110376	48110462	(10507154)	+	MLT1B	LTR/ERVL-MaLR	301	379	(11)	1887967
506	31.6	0.0	0.7	chr19	48351007	48351146	(10266470)	+	L2a	LINE/L2	2302	2440	(979)	1888537
264	31.6	5.5	0.0	chr19	48351182	48351317	(10266299)	+	L2-1_AMi	LINE/L2	527	670	(565)	1888538
785	25.5	10.9	2.0	chr19	48351326	48351849	(10265767)	+	L2a	LINE/L2	2629	3222	(204)	1888537
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
764	33.1	1.9	0.0	chr19	50633690	50633940	(7983676)	C	MIR	SINE/MIR	(1)	261	6	1893972
277	22.6	10.7	3.8	chr19	50634418	50634557	(7983059)	C	MIRb	SINE/MIR	(77)	191	35	1893973
1857	16.5	1.1	0.0	chr19	50634573	50634880	(7982736)	C	AluSz6	SINE/Alu	(0)	312	1	1893974
15	26.3	2.7	4.0	chr19	51593286	51593358	(7024258)	+	(CCCAG)n	Simple_repeat	1	75	(0)	1895866
2111	12.5	1.0	0.7	chr19	51747222	51747517	(6870099)	C	AluSx	SINE/Alu	(15)	297	1	1896180
242	23.5	0.0	0.0	chr19	54102439	54102489	(4515127)	+	MIRc	SINE/MIR	98	148	(120)	1901088
14	18.9	2.8	0.0	chr19	54773133	54773168	(3844448)	+	GA-rich	Low_complexity	1	37	(0)	1902287
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
235	11.6	0.3	1.3	chr19	57137787	57138159	(1479457)	+	(AGGA)n	Simple_repeat	1	374	(0)	1907274
480	24.0	11.5	0.0	chr19	57138199	57138352	(1479264)	C	MER96	DNA/hAT-Tip100	(0)	175	2	1907275
31543	14.0	4.2	2.1	chr19	57564659	57567399	(1050217)	C	LTR25-int	LTR/ERV1	(3703)	3485	633	1907989
2392	8.2	0.0	0.3	chr19	57727861	57728164	(889452)	C	AluSg	SINE/Alu	(6)	304	2	1908229
1753	27.2	8.8	6.0	chr19	57985123	57985646	(631970)	+	L1M4	LINE/L1	1032	1572	(6866)	1908658
16	0.0	0.0	0.0	chr19	58488553	58488569	(129047)	+	(A)n	Simple_repeat	1	17	(0)	1909606
238	31.0	15.5	0.6	chr19	58519001	58519159	(98457)	+	L2	LINE/L2	2650	2836	(583)	1909663
2664	11.7	1.4	0.3	chr2	336771	337130	(241856399)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1911154
10466	12.1	3.8	3.7	chr2	337131	338709	(241854820)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1911154
1685	17.2	6.8	3.3	chr2	684692	685058	(241508471)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1911477
10013	12.1	2.6	6.9	chr2	685059	686764	(241506765)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1911477
2151	14.2	7.4	1.5	chr2	6858460	6858801	(235334728)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1919122
11864	8.9	1.1	0.1	chr2	6858802	6860364	(235333165)	+	THE1B-int	LTR/ERVL-MaLR	1	1579	(1)	1919122
1195	29.0	15.0	3.4	chr2	6881959	6882993	(235310536)	+	HAL1	LINE/L1	593	1761	(746)	1919148
343	18.9	4.3	2.2	chr2	6883086	6883177	(235310352)	+	LTR33A_	LTR/ERVL	372	465	(66)	1919149
350	24.9	11.3	6.7	chr2	9554870	9555063	(232638466)	C	MamRep1879	DNA/hAT-Tip100?	(1)	215	12	1923167
10181	14.3	4.2	0.2	chr2	10937713	10939277	(231254252)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1925759
2059	14.9	13.6	1.1	chr2	10939278	10939651	(231253878)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1925759
1213	9.8	9.7	1.9	chr2	11460632	11460840	(230732689)	C	Tigger3c	DNA/TcMar-Tigger	(31)	571	345	1926678
549	17.2	0.0	1.1	chr2	11460838	11460925	(230732604)	C	Tigger3b	DNA/TcMar-Tigger	(1089)	142	56	1926679
4692	18.7	4.6	1.9	chr2	11460960	11461340	(230732189)	C	ERVL-B4-int	LTR/ERVL	(4801)	913	517	1926680
1115	20.8	5.6	0.2	chr2	12691948	12692388	(229501141)	C	MLT1C-int	LTR/ERVL-MaLR	(0)	467	1	1928721
1607	18.0	3.3	13.1	chr2	12692389	12692428	(229501101)	C	MLT2C1	LTR/ERVL	(0)	397	361	1928722
46	0.0	0.0	0.0	chr2	12692429	12692467	(229501062)	+	(GT)n	Simple_repeat	1	39	(0)	1928723
1607	18.0	3.3	13.1	chr2	12692468	12692627	(229500902)	C	MLT2C1	LTR/ERVL	(37)	360	243	1928722
1562	26.7	2.9	7.4	chr2	12859352	12859558	(229333971)	+	MLT1F2	LTR/ERVL-MaLR	354	558	(2)	1928990
4535	25.1	3.0	2.0	chr2	12859562	12860256	(229333273)	+	MLT1F2-int	LTR/ERVL-MaLR	1	694	(795)	1928990
1842	12.4	8.6	2.6	chr2	14800181	14800519	(227393010)	+	THE1B	LTR/ERVL-MaLR	2	362	(2)	1931747
1913	23.5	8.4	5.3	chr2	14800520	14801177	(227392352)	C	L1ME1	LINE/L1	(4209)	2191	1511	1931742
210	37.5	12.0	0.4	chr2	15705000	15705272	(226488257)	+	L2b	LINE/L2	2551	2859	(560)	1933152
2188	12.0	3.9	3.9	chr2	18113965	18114328	(224079201)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1936988
10800	9.7	4.9	0.2	chr2	18114329	18115834	(224077695)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1936988
2928	20.5	11.6	4.0	chr2	20330256	20331006	(221862523)	+	MER21B	LTR/ERVL	1	816	(52)	1940144
332	12.3	6.6	0.0	chr2	20331054	20331110	(221862419)	+	MER21-int	LTR/ERVL	2	62	(4129)	1940144
1514	19.2	9.0	1.8	chr2	20331265	20331604	(221861925)	+	MER21-int	LTR/ERVL	146	512	(3679)	1940144
1744	14.9	15.2	2.4	chr2	21534686	21535057	(220658472)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1941880
10035	13.6	2.5	1.1	chr2	21535058	21536665	(220656864)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1941880
9228	13.9	3.8	3.8	chr2	21991649	21993228	(220200301)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1942463
2201	13.1	4.0	1.6	chr2	21993229	21993594	(220199935)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1942463
12	13.9	0.0	0.0	chr2	23674686	23674709	(218518820)	+	(ACCC)n	Simple_repeat	1	24	(0)	1944681
185	31.2	12.4	9.3	chr2	25265835	25265921	(216927608)	+	MIRb	SINE/MIR	170	252	(16)	1947616
1200	19.3	11.7	5.7	chr2	25728536	25728749	(216464780)	C	Charlie1a	DNA/hAT-Charlie	(864)	591	350	1948464
2459	9.3	0.0	0.0	chr2	25728792	25729102	(216464427)	+	AluY	SINE/Alu	1	311	(0)	1948467
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
10352	10.1	3.2	6.1	chr2	39358935	39360563	(202832966)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1971060
2379	12.5	1.9	0.8	chr2	39360564	39360934	(202832595)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1971060
195	21.1	0.0	0.0	chr2	41693474	41693511	(200500018)	+	L2b	LINE/L2	3320	3357	(18)	1974275
256	20.0	0.0	0.0	chr2	41693707	41693756	(200499773)	+	Arthur1B	DNA/hAT-Tip100	86	135	(1090)	1974276
1329	21.5	2.3	0.0	chr2	45739564	45739861	(196453668)	+	L1ME1	LINE/L1	5860	6164	(15)	1981177
2917	21.4	1.9	3.0	chr2	48177851	48178211	(194015318)	C	MSTB1-int	LTR/ERVL-MaLR	(1281)	370	6	1985502
2058	16.6	7.0	0.8	chr2	48178216	48178615	(194014914)	C	MSTB1	LTR/ERVL-MaLR	(3)	429	3	1985502
11242	11.2	0.3	0.3	chr2	49731551	49733130	(192460399)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1987812
2248	13.5	0.3	6.0	chr2	49733131	49733276	(192460253)	C	THE1B	LTR/ERVL-MaLR	(0)	364	227	1987812
2307	11.7	0.0	0.0	chr2	49733277	49733574	(192459955)	C	AluSg	SINE/Alu	(12)	298	1	1987813
2159	22.2	6.0	6.0	chr2	49777511	49778157	(192415372)	+	L1MA9	LINE/L1	5628	6274	(38)	1987878
1448	18.0	8.1	2.5	chr2	50940926	50941284	(191252245)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1989431
11073	12.6	0.6	0.2	chr2	50941285	50942909	(191250620)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1989431
2215	12.7	4.7	2.5	chr2	51431180	51431535	(190761994)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1990058
5165	12.1	0.9	0.1	chr2	51431536	51432297	(190761232)	+	THE1B-int	LTR/ERVL-MaLR	1	768	(812)	1990058
11034	9.6	3.8	0.0	chr2	59614239	59615757	(182577772)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2001339
2155	13.0	2.8	2.8	chr2	59615759	59616122	(182577407)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2001339
391	31.8	0.0	0.0	chr2	59776581	59776687	(182416842)	+	MIR3	SINE/MIR	73	179	(29)	2001558
642	25.0	2.5	7.1	chr2	62713073	62713253	(179480276)	C	L2	LINE/L2	(2508)	911	741	2006897
2108	11.4	3.7	0.7	chr2	62713254	62713543	(179479986)	C	AluSz6	SINE/Alu	(13)	299	1	2006900
11926	17.9	5.2	2.8	chr2	66404590	66405211	(175788318)	+	L1MC3	LINE/L1	6389	7038	(922)	2012744
30	0.0	0.0	0.0	chr2	66405212	66405237	(175788292)	+	(AC)n	Simple_repeat	1	26	(0)	2012748
11926	17.9	5.2	2.8	chr2	66405238	66406154	(175787375)	+	L1MC3	LINE/L1	7039	7958	(2)	2012744
1797	14.3	2.6	4.8	chr2	70643453	70643766	(171549763)	C	AluJb	SINE/Alu	(4)	308	2	2019398
721	21.0	13.2	4.3	chr2	70774042	70774346	(171419183)	+	MLT2B4	LTR/ERVL	56	547	(15)	2019596
3990	23.1	5.3	9.6	chr2	70774347	70774943	(171418586)	+	MLT1A-int	LTR/ERVL-MaLR	1	554	(817)	2019597
12329	8.3	0.5	0.0	chr2	70798352	70799923	(171393606)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2019630
2127	11.4	6.2	0.9	chr2	70799924	70800259	(171393270)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2019630
11964	8.8	1.0	0.2	chr2	71656914	71658480	(170535049)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2020971
2788	7.9	0.3	0.0	chr2	71658481	71658834	(170534695)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2020971
447	29.8	7.7	8.9	chr2	72106914	72107271	(170086258)	C	L2b	LINE/L2	(1)	3374	3022	2021587
247	29.7	8.1	1.6	chr2	72107441	72107625	(170085904)	C	L1ME1	LINE/L1	(3567)	2833	2636	2021572
1470	18.5	5.7	0.0	chr2	73624895	73625175	(168568354)	+	L1MB4	LINE/L1	5882	6179	(1)	2023951
1451	19.6	4.4	0.0	chr2	73685179	73685463	(168508066)	+	L1MB4	LINE/L1	5882	6179	(1)	2024033
11661	9.2	1.9	0.2	chr2	74905750	74907293	(167286236)	C	THE1A-int	LTR/ERVL-MaLR	(1)	1579	10	2026168
2462	5.8	3.1	1.0	chr2	74907299	74907421	(167286108)	C	THE1A	LTR/ERVL-MaLR	(35)	320	190	2026168
2286	11.7	1.3	0.0	chr2	74907422	74907728	(167285801)	+	AluSx1	SINE/Alu	1	311	(1)	2026169
1972	13.2	6.3	7.0	chr2	75486487	75486870	(166706659)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2027038
1615	12.3	0.8	0.0	chr2	75486873	75487132	(166706397)	+	THE1D-int	LTR/ERVL-MaLR	3	264	(1367)	2027038
975	12.7	4.9	0.0	chr2	75487136	75487308	(166706221)	+	THE1D	LTR/ERVL-MaLR	200	381	(0)	2027038
262	21.2	2.9	2.9	chr2	76513761	76513828	(165679701)	+	MLT1C	LTR/ERVL-MaLR	1	68	(399)	2028460
2109	23.1	6.9	0.4	chr2	76513820	76514306	(165679223)	+	LTR53B	LTR/ERVL	13	533	(0)	2028461
1755	18.8	3.3	3.6	chr2	77332863	77333227	(164860302)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2029501
1971	11.8	3.8	0.0	chr2	77333228	77333531	(164859998)	+	THE1B-int	LTR/ERVL-MaLR	1	316	(1264)	2029501
5818	10.9	0.1	0.0	chr2	77333528	77334325	(164859204)	+	THE1B-int	LTR/ERVL-MaLR	782	1580	(0)	2029501
3609	26.4	9.6	13.0	chr2	79099740	79101542	(163091987)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	1	2031841
717	27.6	1.9	0.9	chr2	79101543	79101868	(163091661)	C	MSTD	LTR/ERVL-MaLR	(0)	396	16	2031841
1030	13.6	1.3	0.0	chr2	82501252	82501405	(159692124)	+	THE1B	LTR/ERVL-MaLR	209	364	(0)	2036426
11124	11.0	0.8	0.2	chr2	82501406	82502977	(159690552)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2036426
15	7.8	7.4	0.0	chr2	84423777	84423803	(157769726)	+	GA-rich	Low_complexity	1	29	(0)	2038968
297	27.6	13.0	3.8	chr2	84458315	84458446	(157735083)	C	MIRb	SINE/MIR	(106)	162	17	2039023
286	29.0	7.6	8.8	chr2	84907528	84907690	(157285839)	C	L2c	LINE/L2	(17)	3370	3182	2039636
1349	7.5	1.7	0.0	chr2	84907775	84907947	(157285582)	C	AluSq2	SINE/Alu	(9)	304	129	2039637
2292	8.1	3.2	2.6	chr2	84907951	84908259	(157285270)	C	AluSp	SINE/Alu	(1)	312	2	2039638
1692	18.6	2.0	1.0	chr2	85445445	85445740	(156747789)	C	AluJr	SINE/Alu	(12)	300	2	2040776
244	31.6	3.8	0.0	chr2	85987086	85987161	(156206368)	+	MER117	DNA/hAT-Charlie	96	174	(23)	2041874
550	23.7	8.9	3.3	chr2	85987217	85987460	(156206069)	C	LTR16C	LTR/ERVL	(9)	480	222	2041875
893	27.1	7.5	0.9	chr2	86437699	86438274	(155755255)	C	L1MEh	LINE/L1	(1683)	4463	3847	2042675
1763	10.8	3.7	0.3	chr2	86438343	86438630	(155754899)	+	L1MA8	LINE/L1	5989	6286	(5)	2042676
2350	13.3	8.0	1.0	chr2	87590144	87590539	(154602990)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	2044444
10463	15.1	0.4	0.4	chr2	87590540	87592170	(154601359)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2044444
2266	13.5	4.1	1.7	chr2	88758536	88758890	(153434639)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2046583
12163	8.0	1.1	0.3	chr2	88758891	88760456	(153433073)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2046583
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2753	8.2	5.1	1.8	chr2	90287799	90293618	(151899911)	+	(CCAAGCCAG)n	Simple_repeat	1	6115	(0)	2048155
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
2913	9.0	0.2	0.7	chr2	94664678	94665082	(147528447)	C	THE1B-int	LTR/ERVL-MaLR	(1177)	403	1	2049604
714	21.0	13.5	0.5	chr2	95838110	95838296	(146355233)	C	MSTB-int	LTR/ERVL-MaLR	(1434)	217	3	2051271
2016	21.2	2.2	0.7	chr2	95838350	95838757	(146354772)	C	MSTB	LTR/ERVL-MaLR	(12)	414	1	2051271
347	21.6	2.2	0.0	chr2	96010321	96010408	(146183121)	+	MER96	DNA/hAT-Tip100	1	90	(85)	2051449
1871	13.9	0.7	3.0	chr2	96203682	96203976	(145989553)	+	AluSz	SINE/Alu	2	289	(23)	2051750
1685	14.3	0.0	2.6	chr2	96203999	96204270	(145989259)	+	AluSz	SINE/Alu	29	293	(19)	2051751
746	20.4	13.5	0.5	chr2	97493960	97494146	(144699383)	C	MSTB-int	LTR/ERVL-MaLR	(1434)	217	3	2053741
1779	22.0	2.2	7.1	chr2	97494200	97494635	(144698894)	C	MSTB	LTR/ERVL-MaLR	(12)	414	1	2053741
2630	10.5	0.6	0.0	chr2	98320012	98320372	(143873157)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	2054847
9611	12.6	7.3	0.3	chr2	98320373	98321840	(143871689)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2054847
7762	6.8	1.4	4.5	chr2	100269773	100270806	(141922723)	+	LTR5B	LTR/ERVK	1	1002	(0)	2057644
822	25.6	10.4	4.0	chr2	100270807	100270910	(141922619)	C	ERV3-16A3_I-int	LTR/ERVL	(4840)	156	50	2057642
994	29.7	10.0	0.5	chr2	100270937	100271342	(141922187)	C	LTR16A	LTR/ERVL	(2)	449	1	2057645
9495	12.7	5.3	1.1	chr2	102365046	102366475	(139827054)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	88	2060991
28	2.5	2.3	4.4	chr2	102366476	102366519	(139827010)	+	(CAAACTGTTC)n	Simple_repeat	1	45	(0)	2060992
9495	12.7	5.3	1.1	chr2	102366520	102366601	(139826928)	C	THE1C-int	LTR/ERVL-MaLR	(1493)	87	2	2060991
1357	8.7	32.2	0.0	chr2	102366604	102366856	(139826673)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	2060991
2448	9.7	0.0	0.0	chr2	103032723	103033031	(139160498)	C	AluY	SINE/Alu	(2)	309	1	2061857
13075	18.7	3.5	5.0	chr2	103033032	103036943	(139156586)	C	L1MA9	LINE/L1	(367)	7364	3521	2061856
138	27.8	3.6	0.2	chr2	104650320	104650769	(137542760)	+	GA-rich	Low_complexity	1	464	(0)	2063803
3503	15.7	2.8	1.2	chr2	104650771	104651441	(137542088)	+	L1MB3	LINE/L1	5502	6183	(0)	2063804
542	24.8	0.0	8.1	chr2	106669796	106669936	(135523593)	C	L1PB4	LINE/L1	(24)	6279	6014	2066844
2381	15.0	5.0	1.7	chr2	106669937	106670344	(135523185)	+	MSTA	LTR/ERVL-MaLR	3	424	(4)	2066845
9240	16.0	2.1	0.9	chr2	106670349	106671960	(135521569)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	2066846
248	31.1	6.4	5.0	chr2	108896494	108896632	(133296897)	+	L2c	LINE/L2	3247	3387	(0)	2069975
2219	13.9	3.3	1.7	chr2	110154019	110154376	(132039153)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2071816
11820	8.8	0.4	0.4	chr2	110154377	110155955	(132037574)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2071816
1105	24.8	14.2	11.3	chr2	112931468	112931886	(129261643)	+	MLT1G1	LTR/ERVL-MaLR	114	510	(69)	2075976
540	29.8	4.0	1.8	chr2	112931887	112932108	(129261421)	+	MLT1G1-int	LTR/ERVL-MaLR	1	227	(1182)	2075976
369	26.7	12.9	2.0	chr2	112932111	112932167	(129261362)	+	MLT1G1-int	LTR/ERVL-MaLR	531	596	(813)	2075976
2490	7.1	0.0	1.0	chr2	112932168	112932478	(129261051)	+	AluY	SINE/Alu	3	310	(1)	2075977
1791	19.8	7.5	0.3	chr2	113056072	113056441	(129137088)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	150	2076146
2658	11.8	0.0	0.8	chr2	113056494	113056860	(129136669)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2076145
2487	10.6	1.7	0.0	chr2	116163398	116163746	(126029783)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2080763
11094	10.9	0.6	0.8	chr2	116163747	116165004	(126028525)	+	THE1A-int	LTR/ERVL-MaLR	1	1254	(326)	2080763
10207	14.5	1.0	0.1	chr2	116894974	116896526	(125297003)	C	THE1D-int	LTR/ERVL-MaLR	(64)	1567	1	2081627
2086	11.4	5.8	1.9	chr2	116896527	116896892	(125296637)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2081627
11267	11.8	1.8	0.2	chr2	119612761	119614364	(122579165)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2085650
2432	11.9	1.1	1.9	chr2	119614367	119614744	(122578785)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2085650
1045	8.1	0.0	7.5	chr2	119957424	119957584	(122235945)	+	MER1B	DNA/hAT-Charlie	190	338	(1)	2086214
18	25.5	0.0	0.0	chr2	120511963	120512002	(121681527)	+	A-rich	Low_complexity	1	40	(0)	2087092
635	29.6	3.6	0.5	chr2	120669397	120669586	(121523943)	C	MamRep564	Unknown	(132)	225	30	2087379
2459	9.6	4.2	1.4	chr2	121157286	121157653	(121035876)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	2088179
290	13.3	0.0	0.0	chr2	121157660	121157704	(121035825)	C	tRNA-Leu-TTA	tRNA	(0)	86	42	2088180
2847	19.8	7.3	0.4	chr2	121157849	121158557	(121034972)	C	L1MDa	LINE/L1	(4861)	1772	1011	2088181
498	28.5	4.2	3.2	chr2	122411091	122411405	(119782124)	+	MLT1B	LTR/ERVL-MaLR	1	314	(94)	2090371
1965	15.3	5.0	2.8	chr2	122411442	122411797	(119781732)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2090372
6707	22.6	6.9	0.4	chr2	126525942	126527484	(115666045)	C	MSTB1-int	LTR/ERVL-MaLR	(0)	1651	1	2096037
2433	17.2	1.6	0.2	chr2	126527485	126527910	(115665619)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2096037
2490	14.4	1.6	0.0	chr2	126925202	126925576	(115267953)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2096621
10374	11.7	4.1	1.0	chr2	126925579	126927106	(115266423)	+	THE1D-int	LTR/ERVL-MaLR	3	1580	(0)	2096622
2288	13.8	3.1	1.1	chr2	127237552	127237924	(114955605)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2097105
10382	13.1	4.5	0.8	chr2	127237927	127238816	(114954713)	+	THE1D-int	LTR/ERVL-MaLR	3	909	(722)	2097106
8582	19.3	4.4	0.1	chr2	128707092	128708667	(113484862)	C	MSTB-int	LTR/ERVL-MaLR	(5)	1646	1	2099599
2464	16.4	5.6	0.2	chr2	128708668	128709070	(113484459)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2099599
437	30.7	14.0	1.9	chr2	133491130	133491398	(108702131)	C	L2a	LINE/L2	(0)	3426	3120	2106011
296	26.3	0.6	14.8	chr2	136343084	136343266	(105850263)	C	Charlie8	DNA/hAT-Charlie	(2270)	158	2	2110546
11535	9.7	0.8	0.1	chr2	138735626	138737185	(103456344)	C	THE1B-int	LTR/ERVL-MaLR	(7)	1573	3	2113895
2081	14.4	3.3	3.6	chr2	138737188	138737547	(103455982)	C	THE1B	LTR/ERVL-MaLR	(0)	364	6	2113895
1757	25.4	17.8	1.9	chr2	142531239	142531864	(99661665)	+	MER21C	LTR/ERVL	99	902	(36)	2118921
2247	28.6	11.4	4.3	chr2	143072876	143073608	(99119921)	+	MLT1G1-int	LTR/ERVL-MaLR	49	830	(579)	2119622
1981	27.0	1.4	5.7	chr2	143073609	143074190	(99119339)	+	MLT1F2	LTR/ERVL-MaLR	1	557	(3)	2119624
2057	15.9	3.3	3.0	chr2	143918437	143918799	(98274730)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2120675
11294	10.5	0.9	0.3	chr2	143918801	143920368	(98273161)	+	THE1B-int	LTR/ERVL-MaLR	2	1578	(2)	2120675
1205	29.8	7.6	4.0	chr2	144846350	144846870	(97346659)	+	MLT1F2	LTR/ERVL-MaLR	18	558	(2)	2121911
11064	11.3	0.6	0.0	chr2	145311566	145313134	(96880395)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2122518
2080	14.9	0.3	6.9	chr2	145313136	145313525	(96880004)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2122518
11508	9.1	1.6	0.5	chr2	147268227	147269783	(94923746)	C	THE1B-int	LTR/ERVL-MaLR	(5)	1575	1	2124994
2025	16.8	0.3	5.0	chr2	147269784	147270165	(94923364)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2124994
1018	24.1	12.8	5.0	chr2	150678573	150678929	(91514600)	+	MLT1D	LTR/ERVL-MaLR	95	483	(22)	2129712
5193	23.8	2.8	7.1	chr2	150678930	150680209	(91513320)	+	MLT1D-int	LTR/ERVL-MaLR	1	1242	(129)	2129712
12171	8.2	0.9	0.1	chr2	158027088	158028655	(84164874)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2139610
2034	12.8	0.7	0.7	chr2	158028656	158028953	(84164576)	C	THE1A	LTR/ERVL-MaLR	(0)	355	58	2139610
946	14.4	8.1	0.0	chr2	158839409	158839568	(83353961)	+	MER50	LTR/ERV1	561	734	(0)	2140675
11425	10.7	1.1	0.2	chr2	159014492	159016056	(83177473)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2140989
2015	13.8	2.0	6.2	chr2	159016057	159016427	(83177102)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2140989
599	31.7	8.5	1.2	chr2	159444937	159445188	(82748341)	+	ERVL-E-int	LTR/ERVL	954	1225	(4442)	2141584
971	26.3	9.0	17.4	chr2	159445216	159445840	(82747689)	C	LTR41C	LTR/ERVL	(9)	692	156	2141585
384	19.2	1.3	0.0	chr2	161064050	161064127	(81129402)	+	MADE2	DNA/TcMar-Mariner	2	80	(0)	2143912
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
10150	10.8	8.6	2.8	chr2	162078240	162079725	(80113804)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2145205
2947	9.9	0.0	0.3	chr2	162079726	162080090	(80113439)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2145205
5257	13.4	9.9	0.1	chr2	162848132	162849012	(79344517)	C	THE1D-int	LTR/ERVL-MaLR	(603)	977	1	2146187
1577	16.4	8.7	3.6	chr2	162849013	162849373	(79344156)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2146187
2590	6.6	0.0	2.2	chr2	165156225	165156542	(77036987)	+	AluY	SINE/Alu	1	311	(0)	2149296
5353	16.6	5.8	2.8	chr2	165156617	165156736	(77036793)	C	L1MC3	LINE/L1	(0)	7785	7631	2149297
824	15.7	0.9	0.0	chr2	165156737	165156851	(77036678)	C	AluJo	SINE/Alu	(196)	116	1	2149298
5353	16.6	5.8	2.8	chr2	165156852	165156901	(77036628)	C	L1MC3	LINE/L1	(155)	7630	7586	2149297
2517	8.4	0.0	0.0	chr2	165156902	165157209	(77036320)	C	AluY	SINE/Alu	(3)	308	1	2149299
4582	11.5	5.3	6.5	chr2	165671437	165672264	(76521265)	C	THE1B-int	LTR/ERVL-MaLR	(763)	817	1	2149985
2022	14.1	6.6	2.9	chr2	165672265	165672614	(76520915)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2149985
2224	14.3	0.8	1.9	chr2	166137351	166137713	(76055816)	+	THE1B	LTR/ERVL-MaLR	1	359	(5)	2150616
11705	9.4	1.3	0.0	chr2	166137718	166139277	(76054252)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2150616
24	6.6	0.0	0.0	chr2	166376221	166376252	(75817277)	+	(GT)n	Simple_repeat	1	32	(0)	2150941
2586	9.3	0.3	0.3	chr2	167034818	167035172	(75158357)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2151729
10965	10.4	1.6	0.2	chr2	167035173	167036729	(75156800)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2151729
435	31.9	7.1	2.3	chr2	167283318	167283490	(74910039)	+	MLT1J1	LTR/ERVL-MaLR	263	444	(0)	2152019
2686	28.4	10.4	2.9	chr2	167283492	167284719	(74908810)	+	MLT1J1-int	LTR/ERVL-MaLR	2	1331	(56)	2152019
1361	18.6	6.8	0.0	chr2	167303386	167303633	(74889896)	+	MLT2B1	LTR/ERVL	1	266	(254)	2152048
52	2.1	0.0	0.0	chr2	167303635	167303683	(74889846)	+	(AC)n	Simple_repeat	1	49	(0)	2152049
3746	18.2	7.3	6.1	chr2	167303747	167304566	(74888963)	C	ERVL-B4-int	LTR/ERVL	(4883)	831	1	2152050
320	32.9	6.0	10.4	chr2	168005543	168005908	(74187621)	C	L2c	LINE/L2	(0)	3387	3039	2152931
2433	25.6	15.8	0.7	chr2	168576808	168577855	(73615674)	C	L2a	LINE/L2	(779)	2640	1404	2153773
4692	12.9	3.9	4.2	chr2	169469788	169470091	(72723438)	+	L1MA10	LINE/L1	5477	5785	(549)	2154997
1723	15.2	9.2	0.3	chr2	169470092	169470408	(72723121)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	2154998
2204	15.8	4.4	8.9	chr2	170475801	170476052	(71717477)	+	LTR47A	LTR/ERVL	1	236	(216)	2156686
5446	14.2	3.4	1.1	chr2	170476053	170476857	(71716672)	C	LTR1B	LTR/ERV1	(0)	824	1	2156687
2347	11.2	12.4	3.4	chr2	170551737	170552124	(71641405)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2156829
11956	10.4	2.5	0.9	chr2	170552125	170553730	(71639799)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2156829
2557	12.4	2.2	0.0	chr2	171311416	171311771	(70881758)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2158250
10048	9.4	3.4	0.1	chr2	171311778	171313127	(70880402)	+	THE1B-int	LTR/ERVL-MaLR	1	1403	(177)	2158250
2585	10.8	1.3	0.8	chr2	171422916	171423288	(70770241)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2158412
10671	10.0	3.4	3.6	chr2	171423289	171424872	(70768657)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2158412
1885	16.4	0.0	2.0	chr2	173066378	173066670	(69126859)	+	AluJr4	SINE/Alu	2	288	(24)	2161085
563	30.9	9.5	0.9	chr2	175253358	175253569	(66939960)	C	MIRb	SINE/MIR	(35)	233	2	2164545
1160	21.5	0.8	4.5	chr2	175796092	175796255	(66397274)	+	MLT1G	LTR/ERVL-MaLR	103	258	(333)	2165242
2249	11.8	7.1	1.5	chr2	175796262	175796604	(66396925)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2165244
10656	8.9	3.4	0.1	chr2	175796605	175798125	(66395404)	+	THE1B-int	LTR/ERVL-MaLR	1	1573	(7)	2165244
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
3721	13.8	5.9	0.6	chr2	180428421	180429432	(61764097)	C	THE1C-int	LTR/ERVL-MaLR	(514)	1066	1	2171463
2741	11.5	0.0	0.0	chr2	180429433	180429805	(61763724)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	2171463
10910	11.3	0.6	0.1	chr2	184885915	184887486	(57306043)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2177091
2606	10.2	0.3	0.0	chr2	184887487	184887840	(57305689)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2177091
1650	21.0	8.9	3.9	chr2	185810189	185810537	(56382992)	+	MSTA	LTR/ERVL-MaLR	1	364	(64)	2178251
27	0.0	0.0	0.0	chr2	185810538	185810563	(56382966)	+	(T)n	Simple_repeat	1	26	(0)	2178252
1650	21.0	8.9	3.9	chr2	185810564	185810619	(56382910)	+	MSTA	LTR/ERVL-MaLR	365	427	(1)	2178251
6360	20.4	4.8	5.4	chr2	185810620	185811185	(56382344)	+	MSTA-int	LTR/ERVL-MaLR	1	504	(1147)	2178251
1115	22.3	13.0	6.8	chr2	188043879	188043930	(54149599)	+	MLT1A1	LTR/ERVL-MaLR	371	408	(0)	2181149
1628	18.4	3.4	0.3	chr2	188043931	188044247	(54149282)	+	MLT1A1-int	LTR/ERVL-MaLR	1	327	(1408)	2181149
11481	9.4	1.6	0.1	chr2	188384510	188386066	(53807463)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2181597
2063	17.5	2.7	3.5	chr2	188386067	188386433	(53807096)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2181597
3724	27.6	6.2	6.1	chr2	188610367	188611695	(53581834)	C	MSTC-int	LTR/ERVL-MaLR	(396)	1339	1	2181827
1767	20.8	3.3	4.2	chr2	188611696	188612127	(53581402)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2181827
4141	21.2	2.9	1.2	chr2	188846116	188847166	(53346363)	+	L1MA9	LINE/L1	5197	6274	(38)	2182112
1129	29.6	7.0	1.1	chr2	189673196	189673667	(52519862)	+	L2b	LINE/L2	1998	2499	(920)	2183193
4061	21.4	6.1	5.1	chr2	189940901	189942092	(52251437)	+	L1M3f	LINE/L1	2632	3836	(3726)	2183608
1963	18.4	8.6	0.8	chr2	189942093	189942486	(52251043)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2183614
9839	16.1	1.0	0.7	chr2	189942487	189944131	(52249398)	+	MSTA-int	LTR/ERVL-MaLR	1	1650	(1)	2183614
9725	13.5	3.1	2.5	chr2	190014564	190016181	(52177348)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	2183710
2173	9.5	6.3	2.7	chr2	190016185	190016551	(52176978)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2183711
323	28.2	3.3	5.7	chr2	190402826	190402949	(51790580)	+	L1M5	LINE/L1	4167	4287	(1859)	2184320
883	26.6	10.1	3.6	chr2	190403275	190403461	(51790068)	+	MLT1J	LTR/ERVL-MaLR	10	201	(311)	2184321
2367	10.3	0.3	0.3	chr2	190403462	190403772	(51789757)	C	AluSq	SINE/Alu	(2)	311	1	2184322
11009	10.8	0.7	0.2	chr2	193007574	193009145	(49184384)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2187933
2625	10.1	0.0	0.3	chr2	193009146	193009501	(49184028)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2187933
6644	18.9	12.0	6.2	chr2	194327284	194328930	(47864599)	+	MER52A	LTR/ERV1	2	1755	(0)	2189520
2528	8.8	1.1	0.8	chr2	195387310	195387663	(46805866)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2190816
11255	10.5	0.8	0.4	chr2	195387664	195389238	(46804291)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2190816
2179	14.2	0.0	0.0	chr2	200836553	200836863	(41356666)	C	AluSx1	SINE/Alu	(1)	311	1	2198949
2175	15.5	5.1	2.6	chr2	200836864	200836913	(41356616)	C	MLT1A0-int	LTR/ERVL-MaLR	(1683)	52	2	2198944
1291	25.8	3.3	4.3	chr2	200836915	200837199	(41356330)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	86	2198944
2329	16.9	4.8	1.3	chr2	206343723	206344184	(35849345)	+	MER54A	LTR/ERVL	406	884	(17)	2208475
2460	14.8	5.5	0.5	chr2	206344585	206344985	(35848544)	+	MSTB	LTR/ERVL-MaLR	1	422	(4)	2208476
1592	16.2	1.6	0.0	chr2	206344989	206345296	(35848233)	+	MSTB-int	LTR/ERVL-MaLR	1	313	(1338)	2208476
493	9.9	2.7	0.0	chr2	206345297	206345367	(35848162)	C	MER41B	LTR/ERV1	(0)	634	562	2208477
2327	10.7	4.7	3.6	chr2	206393658	206394017	(35799512)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2208567
3040	6.2	3.2	2.0	chr2	206394029	206394164	(35799365)	+	THE1B-int	LTR/ERVL-MaLR	1142	1277	(303)	2208567
2021	14.0	0.3	1.3	chr2	206394165	206394472	(35799057)	+	AluSz	SINE/Alu	1	305	(7)	2208568
685	31.2	8.5	5.1	chr2	207281959	207282353	(34911176)	C	L2a	LINE/L2	(0)	3426	3017	2209787
4972	22.3	4.1	3.4	chr2	208605075	208605505	(33588024)	+	L1MC4a	LINE/L1	6489	6913	(969)	2212091
2219	12.8	1.6	1.6	chr2	213276947	213277310	(28916219)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2218058
11732	9.1	0.4	0.1	chr2	213277311	213278886	(28914643)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2218058
201	30.2	8.6	3.0	chr2	214945281	214945379	(27248150)	+	OldhAT1	DNA/hAT-Ac	753	857	(1991)	2220352
273	28.8	0.9	10.5	chr2	214945408	214945531	(27247998)	+	UCON29	DNA/PiggyBac?	173	284	(155)	2220353
2364	14.4	2.1	1.9	chr2	215853528	215853901	(26339628)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2221737
10565	13.7	3.5	0.7	chr2	215853902	215855436	(26338093)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2221737
31	12.2	4.5	2.9	chr2	216691768	216691833	(25501696)	+	(TA)n	Simple_repeat	1	69	(0)	2223253
525	27.9	8.4	5.2	chr2	219961006	219961198	(22232331)	C	MER102a	DNA/hAT-Charlie	(19)	311	106	2228781
3585	12.8	7.1	1.6	chr2	219961199	219961771	(22231758)	C	L1MB3	LINE/L1	(1)	6182	5576	2228782
1267	19.2	2.2	4.9	chr2	221590563	221590891	(20602638)	C	MER33	DNA/hAT-Charlie	(0)	324	5	2231276
1553	24.7	2.6	2.6	chr2	221590895	221591360	(20602169)	+	LTR101_Mam	LTR/ERVL	45	510	(319)	2231277
300	26.3	3.3	4.8	chr2	222177192	222177315	(20016214)	+	L1M2	LINE/L1	5597	5718	(573)	2232226
1771	20.1	9.2	7.2	chr2	223799261	223799493	(18394036)	+	MLT1C	LTR/ERVL-MaLR	194	466	(1)	2234873
9487	13.0	4.3	8.9	chr2	224662394	224663530	(17529999)	C	THE1A-int	LTR/ERVL-MaLR	(445)	1186	3	2236325
2805	6.0	0.9	0.3	chr2	224663533	224663882	(17529647)	C	THE1A	LTR/ERVL-MaLR	(0)	355	4	2236325
7952	19.2	3.5	2.9	chr2	227432697	227433403	(14760126)	C	MSTB-int	LTR/ERVL-MaLR	(937)	714	1	2240493
2255	19.0	1.2	4.8	chr2	227433404	227433787	(14759742)	C	MSTB	LTR/ERVL-MaLR	(0)	426	55	2240493
2042	16.8	8.0	4.6	chr2	227582126	227582536	(14610993)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2240733
8458	17.9	2.2	1.4	chr2	227582537	227583588	(14609941)	+	MSTB-int	LTR/ERVL-MaLR	1	1062	(589)	2240733
11030	9.4	5.0	0.0	chr2	229185806	229187306	(13006223)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2243152
2190	11.6	5.0	2.0	chr2	229187307	229187659	(13005870)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2243152
3100	8.0	4.1	0.5	chr2	230119588	230120015	(12073514)	+	MLT2A1	LTR/ERVL	1	444	(0)	2244766
20739	6.2	1.3	0.5	chr2	230120030	230122600	(12070929)	+	HERVL-int	LTR/ERVL	3063	5654	(0)	2244767
12	27.1	0.0	2.2	chr2	230157438	230157483	(12036046)	+	(CAGAGCC)n	Simple_repeat	1	46	(0)	2244823
885	30.3	9.4	2.3	chr2	230157744	230158179	(12035350)	C	L2a	LINE/L2	(0)	3426	2957	2244824
323	24.2	3.2	0.0	chr2	231831755	231831843	(10361686)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247712
351	23.2	2.0	2.0	chr2	231831871	231831971	(10361558)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247712
328	25.0	2.1	0.0	chr2	231831972	231832061	(10361468)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247712
364	22.7	1.1	0.0	chr2	231832103	231832190	(10361339)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
310	24.2	3.2	0.0	chr2	231832191	231832279	(10361250)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
268	25.3	2.2	0.0	chr2	231832282	231832368	(10361161)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
339	22.0	3.2	0.0	chr2	231832369	231832457	(10361072)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
326	23.1	3.2	0.0	chr2	231832458	231832546	(10360983)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
363	20.9	3.2	0.0	chr2	231832547	231832635	(10360894)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
331	23.9	2.1	0.0	chr2	231832636	231832725	(10360804)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
360	23.2	2.0	2.0	chr2	231832753	231832853	(10360676)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247713
373	23.5	1.0	2.0	chr2	231840558	231840647	(10352882)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247733
280	25.3	3.2	0.0	chr2	231840648	231840736	(10352793)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247733
335	22.1	3.1	4.0	chr2	231840737	231840825	(10352704)	+	MER20	DNA/hAT-Charlie	131	218	(1)	2247733
3832	16.2	15.5	2.1	chr2	232986065	232986897	(9206632)	+	L1MA9	LINE/L1	5345	6290	(22)	2249672
2716	33.7	5.2	4.2	chr2	237115659	237116613	(5076916)	+	ERVL-E-int	LTR/ERVL	3778	4762	(905)	2255965
2193	28.5	7.7	3.9	chr2	237880925	237882187	(4311342)	C	L1MC4a	LINE/L1	(1740)	6142	4851	2256987
227	33.7	6.8	7.0	chr2	239582492	239582935	(2610594)	C	L1ME4a	LINE/L1	(4)	6120	5678	2259091
860	29.7	6.5	3.5	chr2	240343085	240343540	(1849989)	+	MLT1H1	LTR/ERVL-MaLR	1	526	(43)	2259957
1657	29.4	6.8	1.0	chr2	240343541	240344224	(1849305)	+	MLT1H1-int	LTR/ERVL-MaLR	1	726	(683)	2259957
39	17.5	1.5	8.0	chr20	420609	420665	(64023502)	+	(CCCCAC)n	Simple_repeat	1	134	(0)	2262906
1086	22.1	1.3	0.4	chr20	540306	540537	(63903630)	C	MLT1E2-int	LTR/ERVL-MaLR	(889)	482	249	2263139
773	10.6	1.9	0.0	chr20	540544	540647	(63903520)	C	AluJb	SINE/Alu	(19)	293	188	2263140
373	17.2	20.2	0.0	chr20	540651	540749	(63903418)	C	MLT1E2-int	LTR/ERVL-MaLR	(1247)	124	1	2263139
2962	19.1	3.8	4.1	chr20	540750	541378	(63902789)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	1	2263139
186	28.2	16.1	2.5	chr20	2236529	2236608	(62207559)	C	L2c	LINE/L2	(4)	3383	3291	2266552
362	36.4	12.0	2.8	chr20	3090191	3090552	(61353615)	+	L2a	LINE/L2	3026	3425	(1)	2268168
220	32.6	12.7	0.0	chr20	3090554	3090691	(61353476)	+	MIRc	SINE/MIR	45	202	(66)	2268173
842	15.9	0.0	3.6	chr20	3090950	3091112	(61353055)	C	FLAM_C	SINE/Alu	(0)	143	1	2268174
512	17.6	0.0	0.0	chr20	4170464	4170548	(60273619)	C	AluSz6	SINE/Alu	(9)	303	219	2270292
1881	15.9	1.4	0.7	chr20	8813548	8813842	(55630325)	+	AluJr	SINE/Alu	1	297	(15)	2277868
12794	8.8	0.2	0.0	chr20	10123523	10125097	(54319070)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2280024
2338	14.3	2.2	2.7	chr20	10125099	10125464	(54318703)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2280024
653	32.4	2.4	2.6	chr20	11254606	11254989	(53189178)	+	MLT1H-int	LTR/ERVL-MaLR	3	385	(1002)	2281717
969	24.4	2.8	4.8	chr20	15248857	15249145	(49195022)	C	LTR16C	LTR/ERVL	(0)	489	207	2287605
1658	27.3	3.7	1.0	chr20	15249534	15250036	(49194131)	+	MER119	DNA/hAT-Charlie	3	519	(64)	2287606
10874	9.7	4.8	0.8	chr20	18180169	18180566	(46263601)	C	THE1A-int	LTR/ERVL-MaLR	(1176)	404	2	2292272
2144	12.9	1.4	3.3	chr20	18180568	18180929	(46263238)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2292272
291	23.7	2.6	0.0	chr20	20946213	20946288	(43497879)	+	MLT1M	LTR/ERVL-MaLR	595	672	(0)	2296358
12	9.7	0.0	0.0	chr20	21028927	21028948	(43415219)	+	(TTTA)n	Simple_repeat	1	22	(0)	2296484
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
33	16.5	5.8	2.2	chr20	29883919	29884004	(34560163)	+	(CA)n	Simple_repeat	1	91	(0)	2304632
4407	13.3	1.5	1.4	chr20	29884017	29884750	(34559417)	C	LTR5_Hs	LTR/ERVK	(0)	968	234	2304633
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
2339	26.4	4.2	3.1	chr20	30828917	30829689	(33614478)	+	L1MA2	LINE/L1	7	732	(6833)	2305492
10690	19.8	5.7	1.0	chr20	30829673	30831843	(33612324)	+	L1MA2	LINE/L1	882	3159	(4406)	2305492
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
576	23.4	6.1	1.9	chr20	30866632	30866788	(33577379)	+	MIRb	SINE/MIR	33	196	(72)	2305530
2182	13.1	0.3	0.3	chr20	32915673	32915970	(31528197)	C	AluSz6	SINE/Alu	(13)	299	2	2309550
3768	19.0	1.7	4.4	chr20	32915971	32916050	(31528117)	C	MLT1A0-int	LTR/ERVL-MaLR	(1660)	75	1	2309547
1667	18.4	5.3	2.9	chr20	32916051	32916251	(31527916)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	155	2309547
2009	16.3	1.0	1.3	chr20	32916252	32916558	(31527609)	C	AluJr	SINE/Alu	(6)	306	1	2309551
11219	9.8	0.5	1.4	chr20	34482206	34483800	(29960367)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2313178
2151	11.3	2.5	2.5	chr20	34483801	34484154	(29960013)	C	THE1B	LTR/ERVL-MaLR	(10)	354	1	2313178
571	27.6	1.9	0.0	chr20	34708394	34708545	(29735622)	C	MIR	SINE/MIR	(64)	198	44	2313684
2386	10.1	0.0	0.0	chr20	35366816	35367121	(29077046)	+	AluSx1	SINE/Alu	5	310	(2)	2315097
577	23.7	4.8	0.7	chr20	35367137	35367276	(29076891)	+	MIR3	SINE/MIR	38	183	(25)	2315098
1951	17.2	0.0	0.3	chr20	35367478	35367785	(29076382)	+	AluJb	SINE/Alu	2	308	(4)	2315099
3370	20.8	8.3	7.9	chr20	35572877	35573147	(28871020)	+	L1M4b	LINE/L1	1606	1861	(5006)	2315581
1720	13.8	10.2	1.4	chr20	35573148	35573423	(28870744)	+	AluSq2	SINE/Alu	2	304	(9)	2315585
2254	13.2	4.4	2.2	chr20	36992774	36993129	(27451038)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2318970
10672	10.5	1.6	1.0	chr20	36993136	36993547	(27450620)	+	THE1B-int	LTR/ERVL-MaLR	6	420	(1160)	2318970
10985	10.5	5.4	1.9	chr20	38280802	38282371	(26161796)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	2321808
2138	12.6	8.4	2.2	chr20	38282375	38282730	(26161437)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	2321808
2504	7.7	0.0	1.0	chr20	38778150	38778462	(25665705)	C	AluSc8	SINE/Alu	(1)	310	1	2322848
247	27.0	7.3	1.1	chr20	38961525	38961614	(25482553)	+	MER5A	DNA/hAT-Charlie	51	146	(43)	2323233
201	23.4	3.8	6.1	chr20	38961850	38961931	(25482236)	C	MIR	SINE/MIR	(87)	175	96	2323234
299	30.4	13.4	2.4	chr20	39951587	39951751	(24492416)	+	L2c	LINE/L2	3147	3332	(55)	2324993
28	16.2	0.0	0.0	chr20	42703199	42703255	(21740912)	+	GA-rich	Low_complexity	1	57	(0)	2329727
284	28.1	2.0	3.0	chr20	42703621	42703719	(21740448)	C	MIR3	SINE/MIR	(28)	180	83	2329728
2348	9.2	0.3	0.0	chr20	43519355	43519648	(20924519)	+	AluSp	SINE/Alu	1	295	(18)	2331359
740	20.2	6.0	6.0	chr20	43519649	43519816	(20924351)	C	AluJo	SINE/Alu	(30)	282	115	2331360
262	17.6	8.6	1.3	chr20	43519817	43519891	(20924276)	C	L1M5	LINE/L1	(961)	5185	5105	2331361
4404	14.1	6.2	1.1	chr20	43519916	43520740	(20923427)	C	L1MB8	LINE/L1	(1)	6177	5308	2331362
19	0.0	6.9	0.0	chr20	45497418	45497446	(18946721)	+	(AAAC)n	Simple_repeat	1	31	(0)	2335769
2142	9.0	1.1	0.0	chr20	45497564	45497869	(18946298)	C	AluSz	SINE/Alu	(0)	312	2	2335770
4278	18.8	11.5	7.2	chr20	48780453	48781407	(15662760)	+	L1MC4a	LINE/L1	6894	7876	(6)	2342852
272	26.7	14.3	0.8	chr20	48781668	48781788	(15662379)	+	MIRb	SINE/MIR	58	197	(71)	2342854
244	30.2	9.1	2.7	chr20	49617785	49617968	(14826199)	+	L2a	LINE/L2	1919	2115	(1304)	2344906
2611	9.1	0.3	0.0	chr20	51217929	51218268	(13225899)	+	HERVL-int	LTR/ERVL	4708	5048	(606)	2348682
234	11.4	0.0	0.0	chr20	51218310	51218344	(13225823)	C	MSTA	LTR/ERVL-MaLR	(2)	379	345	2348681
352	25.5	4.5	0.0	chr20	51218355	51218460	(13225707)	C	Charlie8	DNA/hAT-Charlie	(2246)	182	72	2348680
9543	9.3	13.1	0.5	chr20	52220550	52221967	(12222200)	C	THE1D-int	LTR/ERVL-MaLR	(6)	1625	3	2351041
1668	12.9	3.3	4.0	chr20	52221970	52222012	(12222155)	C	THE1D	LTR/ERVL-MaLR	(0)	381	348	2351041
2251	10.1	2.6	0.7	chr20	52222013	52222309	(12221858)	+	AluSx	SINE/Alu	1	303	(9)	2351042
852	29.4	3.5	0.7	chr20	56306847	56307124	(8137043)	C	LTR33	LTR/ERVL	(0)	515	230	2358771
337	30.2	2.8	0.9	chr20	56307148	56307254	(8136913)	C	LTR33	LTR/ERVL	(350)	165	57	2358771
115	17.0	0.0	2.2	chr20	56570608	56570830	(7873337)	+	GA-rich	Low_complexity	1	223	(0)	2359310
537	20.3	7.1	0.8	chr20	56570831	56570949	(7873218)	C	MER57A-int	LTR/ERV1	(1356)	4831	4705	2359304
810	12.5	0.0	0.9	chr20	56570951	56571062	(7873105)	+	AluSz	SINE/Alu	1	111	(201)	2359311
980	15.3	3.3	7.7	chr20	56571082	56571301	(7872866)	C	THE1D	LTR/ERVL-MaLR	(0)	381	172	2359312
2158	9.8	5.8	0.7	chr20	56571302	56571598	(7872569)	C	AluSp	SINE/Alu	(0)	313	1	2359313
767	24.3	0.0	1.2	chr20	59003409	59003579	(5440588)	+	Tigger5b	DNA/TcMar-Tigger	304	472	(0)	2363797
230	26.6	17.6	1.9	chr20	59003598	59003754	(5440413)	C	L2a	LINE/L2	(186)	3240	3054	2363798
592	27.6	17.3	2.0	chr20	59003807	59004294	(5439873)	C	L2a	LINE/L2	(492)	2927	2350	2363798
718	23.9	2.6	7.4	chr20	61672896	61673180	(2770987)	+	MLT1D	LTR/ERVL-MaLR	119	389	(116)	2367641
1969	18.0	3.7	2.5	chr20	62072970	62073517	(2370650)	+	MLT2A2	LTR/ERVL	1	554	(0)	2368064
4047	9.9	0.0	0.0	chr20	62073537	62074083	(2370084)	+	HERVL-int	LTR/ERVL	4273	4819	(835)	2368065
1821	17.3	6.1	1.6	chr20	62544583	62544970	(1899197)	C	MSTB	LTR/ERVL-MaLR	(0)	426	20	2368680
298	19.5	12.5	0.0	chr20	62544989	62545065	(1899102)	C	L1MD	LINE/L1	(599)	5643	5556	2368681
591	14.5	3.2	0.0	chr20	63442547	63443618	(1000549)	+	(CATCAC)n	Simple_repeat	1	1106	(0)	2369578
198	28.8	7.6	0.0	chr20	64216160	64216232	(227935)	C	L3	LINE/CR1	(1592)	2507	2429	2370596
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1090	23.2	4.0	2.4	chr21	8757475	8757814	(37952169)	C	MER66A	LTR/ERV1	(40)	438	93	2373941
2005	15.9	0.7	0.0	chr21	8871363	8871663	(37838320)	+	AluSz	SINE/Alu	1	303	(9)	2374086
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
471	27.5	6.0	1.2	chr21	10330456	10330628	(36379355)	C	ERVL-E-int	LTR/ERVL	(648)	5019	4838	2375365
1670	18.0	7.8	2.0	chr21	13321741	13322092	(33387891)	+	THE1D	LTR/ERVL-MaLR	5	378	(3)	2376299
7790	13.6	3.5	5.5	chr21	13322096	13323433	(33386550)	+	THE1D-int	LTR/ERVL-MaLR	1	1314	(266)	2376299
2200	13.8	1.4	0.8	chr21	14228490	14228847	(32481136)	+	THE1D	LTR/ERVL-MaLR	1	360	(21)	2377541
10222	12.4	2.5	4.1	chr21	14228859	14230510	(32479473)	+	THE1D-int	LTR/ERVL-MaLR	6	1631	(0)	2377541
221	31.4	7.9	2.8	chr21	15756703	15756810	(30953173)	+	MIRc	SINE/MIR	9	122	(146)	2379590
7237	19.0	10.3	6.4	chr21	16059861	16061542	(30648441)	C	MER52A	LTR/ERV1	(0)	1755	1	2379958
791	24.6	8.3	4.6	chr21	16061543	16061694	(30648289)	C	L1ME3	LINE/L1	(636)	5661	5456	2379957
1926	15.9	7.6	0.3	chr21	18711477	18711829	(27998154)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2383405
9664	12.3	3.6	4.6	chr21	18711830	18713425	(27996558)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2383405
886	27.1	3.1	9.7	chr21	19542811	19543018	(27166965)	C	L2	LINE/L2	(858)	2561	2363	2384462
2345	13.5	1.6	0.6	chr21	19543019	19543383	(27166600)	+	MER83C	LTR/ERV1	1	369	(4)	2384463
886	27.1	3.1	9.7	chr21	19543384	19543537	(27166446)	C	L2	LINE/L2	(1057)	2362	2224	2384462
10677	11.7	2.4	0.0	chr21	20501600	20503141	(26206842)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2385732
2259	9.1	9.9	0.0	chr21	20503142	20503461	(26206522)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2385732
1214	16.8	2.9	3.2	chr21	23604279	23604524	(23105459)	+	THE1A	LTR/ERVL-MaLR	1	245	(110)	2389871
4167	11.3	1.5	0.2	chr21	23604526	23605130	(23104853)	+	THE1A-int	LTR/ERVL-MaLR	1	613	(967)	2389871
1938	18.0	1.9	1.1	chr21	23699228	23699586	(23010397)	+	THE1C	LTR/ERVL-MaLR	14	375	(0)	2390004
9707	13.5	3.2	0.5	chr21	23699587	23701123	(23008860)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2390004
6972	23.0	4.5	0.4	chr21	24308172	24309754	(22400229)	C	MSTB1-int	LTR/ERVL-MaLR	(0)	1651	1	2390953
2205	17.8	2.3	0.5	chr21	24309755	24310178	(22399805)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2390953
10392	11.7	3.0	0.3	chr21	24418315	24419851	(22290132)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2391096
2180	12.5	4.7	2.0	chr21	24419854	24420205	(22289778)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	2391096
7570	12.1	0.5	2.2	chr21	25145979	25147107	(21562876)	C	THE1A-int	LTR/ERVL-MaLR	(471)	1109	1	2392102
2397	9.9	2.8	0.0	chr21	25147110	25147452	(21562531)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	2392102
2100	16.7	2.7	2.5	chr21	25166735	25167097	(21542886)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2392126
10239	10.2	7.6	0.0	chr21	25167098	25168557	(21541426)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2392126
7734	13.7	3.6	5.0	chr21	28029961	28031292	(18678691)	C	THE1D-int	LTR/ERVL-MaLR	(266)	1314	1	2396205
1874	15.5	7.7	1.7	chr21	28031296	28031650	(18678333)	C	THE1D	LTR/ERVL-MaLR	(3)	378	1	2396205
1011	25.7	3.1	5.8	chr21	28180977	28181468	(18528515)	+	L1MD	LINE/L1	5079	5562	(617)	2396411
1939	15.2	6.7	0.6	chr21	28181469	28181820	(18528163)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2396412
7998	13.2	15.2	2.1	chr21	28181824	28183234	(18526749)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	2396413
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
11611	10.5	0.4	0.1	chr21	29252499	29254072	(17455911)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2398012
2350	11.7	0.8	0.8	chr21	29254073	29254427	(17455556)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2398012
473	23.1	10.5	3.0	chr21	29513514	29513744	(17196239)	+	MLT1F	LTR/ERVL-MaLR	323	591	(0)	2398439
622	30.5	8.5	0.2	chr21	29513784	29514045	(17195938)	+	MLT1F-int	LTR/ERVL-MaLR	101	407	(1082)	2398439
15	5.5	0.0	0.0	chr21	35383762	35383780	(11326203)	+	(T)n	Simple_repeat	1	19	(0)	2408039
3362	11.8	3.4	0.0	chr21	36883809	36884293	(9825690)	C	LTR22C0	LTR/ERVK	(0)	502	1	2410609
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
2050	15.5	11.0	2.8	chr21	40799898	40800289	(5909694)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2416554
1700	21.9	8.0	0.5	chr21	40800292	40800694	(5909289)	+	MSTC-int	LTR/ERVL-MaLR	2	437	(1298)	2416554
10443	10.4	4.1	3.7	chr21	40928464	40930035	(5779948)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2416728
2398	10.6	6.1	0.0	chr21	40930037	40930377	(5779606)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	2416728
1963	17.4	6.6	0.0	chr21	42419690	42420029	(4289954)	+	MER47A	DNA/TcMar-Tigger	1	364	(2)	2418852
1612	27.7	2.8	2.2	chr21	42420030	42420068	(4289915)	C	MLT1E1A-int	LTR/ERVL-MaLR	(1448)	41	4	2418851
35	25.9	2.6	1.7	chr21	42420116	42420141	(4289842)	+	(AT)n	Simple_repeat	1	27	(0)	2418853
1315	21.1	9.0	4.3	chr21	42420142	42420468	(4289515)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	2418854
9516	9.1	0.6	0.5	chr21	42999778	43000000	(3709983)	C	THE1B-int	LTR/ERVL-MaLR	(1082)	498	274	2419716
1869	6.0	2.9	0.0	chr21	43000001	43000265	(3709718)	C	THE1B-int	LTR/ERVL-MaLR	(1307)	273	1	2419718
2210	10.5	4.7	3.4	chr21	43000267	43000621	(3709362)	C	THE1B	LTR/ERVL-MaLR	(1)	363	4	2419718
2690	9.3	0.3	0.3	chr21	44611202	44611556	(2098427)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2421949
328	29.2	15.5	0.0	chr21	46316880	46317026	(392957)	+	MIR	SINE/MIR	23	196	(66)	2423798
1644	13.1	7.7	3.6	chr21	46570764	46571000	(138983)	+	L1M4c	LINE/L1	1263	1516	(4868)	2424145
2020	16.5	2.1	1.8	chr21	46571001	46571334	(138649)	+	MER1B	DNA/hAT-Charlie	5	339	(0)	2424146
1714	18.7	1.7	0.0	chr22	10780275	10780563	(40037905)	C	AluJr	SINE/Alu	(18)	294	1	2424641
6038	19.8	6.0	11.2	chr22	11064568	11067436	(39751032)	+	REP522	Satellite/telo	1	2719	(1252)	2424865
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
18616	6.9	0.4	0.0	chr22	11341433	11346064	(39472404)	+	L1P1	LINE/L1	7	4655	(1491)	2425054
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
194	23.1	0.0	1.9	chr22	12174483	12174535	(38643933)	+	MER5A	DNA/hAT-Charlie	118	169	(20)	2425783
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
5759	12.0	4.5	0.9	chr22	17664285	17665519	(33152949)	C	THE1D-int	LTR/ERVL-MaLR	(298)	1282	3	2429498
748	12.6	8.5	0.0	chr22	17665525	17665643	(33152825)	C	THE1D	LTR/ERVL-MaLR	(249)	132	3	2429498
251	12.5	5.9	2.0	chr22	17665646	17665694	(33152774)	C	L1M3	LINE/L1	(306)	5872	5821	2429499
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
660	28.5	7.5	9.3	chr22	19153185	19153729	(31664739)	+	MLT1G1	LTR/ERVL-MaLR	3	578	(1)	2431517
773	28.2	2.5	3.0	chr22	19153736	19154082	(31664386)	+	MLT1G1-int	LTR/ERVL-MaLR	6	397	(1092)	2431517
21899	6.9	0.8	1.5	chr22	19935776	19938863	(30879605)	+	HERVK11-int	LTR/ERVK	1	3067	(4886)	2432709
1813	24.1	4.2	5.2	chr22	20543858	20544315	(30274153)	C	MLT1D-int	LTR/ERVL-MaLR	(900)	471	4	2433526
1687	23.3	5.6	3.5	chr22	20544318	20544383	(30274085)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	437	2433526
2276	6.9	0.3	0.7	chr22	20544384	20544688	(30273780)	+	AluY	SINE/Alu	1	304	(7)	2433530
965	6.2	0.0	4.9	chr22	24556371	24556520	(26261948)	C	AluJb	SINE/Alu	(82)	220	1	2440240
2327	9.7	1.9	0.7	chr22	25350939	25351246	(25467222)	+	AluSx	SINE/Alu	1	312	(0)	2442037
30	0.0	0.0	5.4	chr22	25966233	25966269	(24852199)	+	(TTTTTG)n	Simple_repeat	1	37	(0)	2443266
1575	16.3	10.1	1.1	chr22	30181035	30181304	(20637164)	C	AluJb	SINE/Alu	(15)	297	1	2452083
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2296	13.0	3.0	2.8	chr22	33154780	33155154	(17663314)	+	THE1B	LTR/ERVL-MaLR	1	457	(0)	2458492
11891	9.8	0.8	2.9	chr22	33155155	33156769	(17661699)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2458492
2105	12.6	8.2	0.6	chr22	33788080	33788407	(17030061)	+	THE1B	LTR/ERVL-MaLR	10	364	(0)	2459784
10739	11.2	1.5	3.6	chr22	33788408	33790022	(17028446)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2459784
4253	10.4	4.1	0.2	chr22	34517414	34518020	(16300448)	+	MER41B	LTR/ERV1	1	632	(2)	2461205
992	3.7	2.9	0.0	chr22	34518134	34518267	(16300201)	+	MLT2A1	LTR/ERVL	1	138	(306)	2461206
7947	7.0	4.5	3.4	chr22	34518286	34518783	(16299685)	C	HERVL-int	LTR/ERVL	(3828)	1826	1306	2461207
436	28.4	10.5	2.5	chr22	36371864	36372065	(14446403)	+	L2a	LINE/L2	3206	3425	(1)	2464847
2065	12.5	0.0	4.7	chr22	36372212	36372532	(14445936)	+	AluJr	SINE/Alu	7	312	(0)	2464848
2280	3.7	5.5	0.0	chr22	37844596	37844867	(12973601)	C	AluSc	SINE/Alu	(21)	288	1	2468202
180	31.4	6.9	0.8	chr22	38315071	38315192	(12503276)	C	MIR1_Amn	SINE/MIR	(80)	150	21	2469240
18	12.6	0.0	0.0	chr22	38981378	38981404	(11837064)	+	(A)n	Simple_repeat	1	27	(0)	2470649
13	32.3	1.6	0.0	chr22	39457998	39458058	(11360410)	+	(GCGGAG)n	Simple_repeat	1	62	(0)	2471693
1967	13.9	1.1	0.0	chr22	42677514	42677794	(8140674)	+	AluSx1	SINE/Alu	1	284	(28)	2478659
33	2.7	0.0	2.5	chr22	42677795	42677834	(8140634)	+	(AAAC)n	Simple_repeat	1	40	(0)	2478660
1694	15.4	8.2	5.0	chr22	42677835	42677880	(8140588)	+	THE1D	LTR/ERVL-MaLR	342	375	(6)	2478658
10156	12.6	3.2	4.3	chr22	42677881	42679477	(8138991)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2478658
220	21.4	1.8	3.5	chr22	43295460	43295517	(7522951)	C	L3	LINE/CR1	(108)	3991	3935	2479946
180	22.2	11.3	6.0	chr22	43295764	43295830	(7522638)	C	L2b	LINE/L2	(0)	3375	3305	2479947
272	28.8	7.2	3.0	chr22	45542423	45542552	(5275916)	+	MIR1_Amn	SINE/MIR	37	170	(38)	2484142
236	30.4	11.3	1.6	chr22	45542853	45542979	(5275489)	+	MIRc	SINE/MIR	9	149	(119)	2484143
2227	3.8	0.4	5.2	chr22	46037702	46037989	(4780479)	C	AluY	SINE/Alu	(36)	275	2	2484928
458	15.7	4.8	0.0	chr22	46038269	46038379	(4780089)	+	MIR	SINE/MIR	72	208	(60)	2484929
1182	23.1	14.9	1.1	chr22	47416455	47416805	(3401663)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2486817
7339	19.4	8.4	3.2	chr22	47416806	47418448	(3400020)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1735	(0)	2486817
2651	30.1	4.1	3.4	chr22	49001072	49002559	(1815909)	C	L1MD2	LINE/L1	(5112)	1528	30	2488870
1943	11.9	2.5	0.0	chr22	49707868	49708178	(1110290)	C	MER21-int	LTR/ERVL	(3872)	319	1	2489657
4705	16.6	3.2	2.9	chr22	49708182	49709043	(1109425)	C	MER21B	LTR/ERVL	(3)	865	1	2489657
11320	10.1	1.2	0.3	chr3	6423915	6425480	(191870079)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2502235
2227	14.1	0.8	2.4	chr3	6425481	6425850	(191869709)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2502235
8531	14.1	2.0	0.2	chr3	7552111	7553464	(190742095)	C	THE1D-int	LTR/ERVL-MaLR	(250)	1381	3	2503973
2018	15.8	2.1	4.6	chr3	7553467	7553857	(190741702)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2503973
11606	8.6	1.4	1.0	chr3	11406935	11408503	(186887056)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	2511411
2056	15.8	2.5	1.9	chr3	11408504	11408865	(186886694)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2511411
1393	21.0	0.7	5.9	chr3	11408866	11408911	(186886648)	C	AluJr	SINE/Alu	(267)	45	1	2511409
686	27.3	6.6	1.2	chr3	14233955	14234199	(184061360)	C	Charlie26a	DNA/hAT-Charlie	(8)	317	59	2516503
332	7.5	0.0	9.5	chr3	15886449	15886522	(182409037)	+	MLT2B2	LTR/ERVL	457	523	(39)	2519560
526	10.2	6.7	1.0	chr3	15886524	15886584	(182408975)	+	MLT2B2	LTR/ERVL	457	524	(38)	2519560
75	2.6	1.3	0.0	chr3	15886585	15886663	(182408896)	+	(ATCC)n	Simple_repeat	1	80	(0)	2519561
526	10.2	6.7	1.0	chr3	15886664	15886700	(182408859)	+	MLT2B2	LTR/ERVL	525	561	(1)	2519560
4260	20.0	3.7	1.7	chr3	15886702	15888041	(182407518)	+	MLT1A0-int	LTR/ERVL-MaLR	1	1370	(1)	2519562
815	15.6	5.8	2.2	chr3	17872718	17872900	(180422659)	C	L1P5	LINE/L1	(380)	5776	5587	2522512
2574	10.8	1.3	0.3	chr3	17950335	17950705	(180344854)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2522637
10015	11.0	3.5	3.9	chr3	17950706	17952291	(180343268)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2522637
1925	12.7	15.0	7.7	chr3	18182990	18183406	(180112153)	+	MLT2A2	LTR/ERVL	1	453	(0)	2522991
2338	8.7	0.9	0.0	chr3	18183412	18183734	(180111825)	+	THE1B-int	LTR/ERVL-MaLR	7	332	(1299)	2522992
1537	19.5	5.9	0.0	chr3	20050312	20050613	(178244946)	C	L1ME3	LINE/L1	(20)	6142	5822	2525582
12	28.9	0.0	2.1	chr3	23202990	23203000	(175092559)	+	G-rich	Low_complexity	1	26	(22)	2529842
12	16.1	0.0	3.3	chr3	23203001	23203030	(175092529)	+	GA-rich	Low_complexity	1	30	(0)	2529843
15	31.8	0.0	2.7	chr3	23203579	23203651	(175091908)	+	(CGTGCCC)n	Simple_repeat	1	73	(0)	2529844
810	13.8	7.9	0.6	chr3	23778202	23778376	(174517183)	C	MER33	DNA/hAT-Charlie	(0)	324	136	2530749
1694	21.4	5.4	3.4	chr3	23778377	23778758	(174516801)	+	MSTD	LTR/ERVL-MaLR	1	390	(6)	2530750
5367	11.6	2.0	0.9	chr3	23861404	23862188	(174433371)	+	LTR1A2	LTR/ERV1	44	837	(0)	2530908
11660	9.5	0.6	0.5	chr3	26095726	26097304	(172198255)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2534282
2054	13.3	9.1	1.5	chr3	26097305	26097640	(172197919)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2534282
11760	9.8	0.6	0.0	chr3	26283156	26284725	(172010834)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2534489
1976	14.0	9.9	1.5	chr3	26284726	26285058	(172010501)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2534489
247	29.3	2.6	0.0	chr3	26416292	26416366	(171879193)	+	MIRc	SINE/MIR	144	220	(48)	2534659
238	31.5	6.8	7.3	chr3	28039900	28040077	(170255482)	+	HAL1ME	LINE/L1	118	294	(2171)	2537202
374	33.9	12.5	0.3	chr3	28040310	28040596	(170254963)	+	HAL1ME	LINE/L1	595	921	(1544)	2537202
1563	18.9	0.7	5.3	chr3	29038927	29039035	(169256524)	+	AluJb	SINE/Alu	1	108	(204)	2538638
2613	11.8	0.0	0.3	chr3	29039036	29039400	(169256159)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2538639
10127	12.6	1.7	2.8	chr3	29039401	29040997	(169254562)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2538639
5703	22.4	4.0	2.9	chr3	29097057	29100688	(169194871)	C	L1PB3	LINE/L1	(4127)	2789	56	2538698
1590	9.1	14.4	6.0	chr3	31544686	31544937	(166750622)	+	AluSg	SINE/Alu	5	281	(29)	2542264
12	26.8	0.0	0.0	chr3	32502546	32502585	(165792974)	+	(CCCGAG)n	Simple_repeat	1	40	(0)	2543989
17	12.3	0.0	5.1	chr3	32502871	32502910	(165792649)	+	(CCGCC)n	Simple_repeat	1	37	(0)	2543990
304	29.0	13.8	2.3	chr3	32503027	32503199	(165792360)	C	L2a	LINE/L2	(3)	3423	3228	2543991
1589	15.9	0.7	11.3	chr3	32577059	32577264	(165718295)	C	AluJr	SINE/Alu	(21)	291	108	2544154
33	0.0	5.3	0.0	chr3	32577265	32577302	(165718257)	+	(TTTTG)n	Simple_repeat	1	40	(0)	2544155
1589	15.9	0.7	11.3	chr3	32577303	32577421	(165718138)	C	AluJr	SINE/Alu	(205)	107	1	2544154
240	30.9	2.9	4.0	chr3	32577422	32577596	(165717963)	C	Tigger15a	DNA/TcMar-Tigger	(108)	607	435	2544156
11690	9.2	1.2	0.1	chr3	33266375	33267936	(165027623)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2545596
2065	12.7	4.8	1.5	chr3	33267937	33268279	(165027280)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2545596
8232	11.4	3.6	1.6	chr3	33753315	33754610	(164540949)	C	THE1B-int	LTR/ERVL-MaLR	(257)	1323	1	2546386
2436	13.3	0.6	0.3	chr3	33754611	33754973	(164540586)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2546386
2525	22.9	3.3	5.6	chr3	33754974	33755397	(164540162)	+	L1ME1	LINE/L1	4561	4963	(1183)	2546387
15	13.9	0.0	0.0	chr3	33886764	33886787	(164408772)	+	(A)n	Simple_repeat	1	24	(0)	2546625
275	26.7	11.0	2.7	chr3	34263644	34263793	(164031766)	C	MER5A	DNA/hAT-Charlie	(1)	188	25	2547204
10546	10.7	1.1	4.2	chr3	34702596	34703036	(163592523)	C	THE1B-int	LTR/ERVL-MaLR	(1146)	434	1	2547767
1723	17.8	3.9	5.2	chr3	34703039	34703405	(163592154)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	2547769
5256	8.0	0.3	0.4	chr3	35141571	35142262	(163153297)	C	HERVL-int	LTR/ERVL	(1901)	3753	3063	2548352
331	27.8	5.0	0.9	chr3	35142285	35142400	(163153159)	C	L1MC4	LINE/L1	(1308)	6734	6614	2548353
9399	12.2	3.2	7.1	chr3	35180863	35182503	(163113056)	C	THE1C-int	LTR/ERVL-MaLR	(5)	1575	1	2548386
2054	15.3	5.5	0.6	chr3	35182504	35182865	(163112694)	C	THE1C	LTR/ERVL-MaLR	(0)	381	1	2548386
414	30.9	8.2	4.4	chr3	37317733	37318219	(160977340)	C	L1MC5a	LINE/L1	(810)	5336	4870	2551396
928	13.6	0.0	0.0	chr3	37318222	37318346	(160977213)	C	AluJo	SINE/Alu	(187)	125	1	2551397
4208	20.3	1.8	3.2	chr3	37417889	37418935	(160876624)	C	L1ME1	LINE/L1	(11)	6168	5135	2551538
11450	9.6	2.0	0.8	chr3	37567421	37568981	(160726578)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2551773
311	2.6	0.0	11.6	chr3	37568982	37569024	(160726535)	C	THE1B	LTR/ERVL-MaLR	(0)	381	321	2551773
2242	12.1	4.7	2.5	chr3	37569046	37569401	(160726158)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2551774
14	17.9	0.0	4.8	chr3	37990903	37990944	(160304615)	+	G-rich	Low_complexity	1	42	(0)	2552374
10271	10.9	5.6	1.1	chr3	38432574	38433892	(159861667)	C	THE1C-int	LTR/ERVL-MaLR	(183)	1397	1	2553043
2109	14.2	5.6	0.8	chr3	38433895	38434249	(159861310)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	2553043
2281	13.7	5.5	1.4	chr3	42918197	42918565	(155376994)	C	MER61D	LTR/ERV1	(3)	498	114	2559882
13914	15.1	2.4	5.5	chr3	42918608	42920639	(155374920)	C	LTR25-int	LTR/ERV1	(1)	7187	5231	2559883
296	34.6	2.1	1.7	chr3	42975517	42975743	(155319816)	C	MIRc	SINE/MIR	(6)	256	39	2559956
1588	18.6	2.9	0.7	chr3	43071024	43071326	(155224233)	+	MER63B	DNA/hAT-Blackjack	97	406	(30)	2560092
980	27.1	2.4	1.2	chr3	43071771	43072020	(155223539)	C	MIRb	SINE/MIR	(14)	254	2	2560093
2207	12.0	0.0	0.7	chr3	43414968	43415275	(154880284)	C	AluSz	SINE/Alu	(0)	312	2	2560594
479	20.7	5.8	2.2	chr3	43415276	43415402	(154880157)	C	MIRb	SINE/MIR	(117)	151	18	2560593
2539	9.8	0.0	1.3	chr3	43415527	43415841	(154879718)	C	AluSz	SINE/Alu	(1)	311	1	2560595
1790	31.1	7.7	5.9	chr3	45819068	45820791	(152474768)	+	ERV3-16A3_I-int	LTR/ERVL	349	2244	(2752)	2564508
1472	27.7	10.0	5.4	chr3	45820846	45821567	(152473992)	+	ERV3-16A3_I-int	LTR/ERVL	2185	2943	(2283)	2564508
2088	13.2	7.2	0.6	chr3	54115948	54116282	(144179277)	+	THE1D	LTR/ERVL-MaLR	23	381	(0)	2578593
10631	11.5	2.9	0.8	chr3	54116283	54117829	(144177730)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2578593
307	26.7	5.3	0.0	chr3	55782541	55782630	(142512929)	C	L2a	LINE/L2	(0)	3426	3332	2580996
1942	30.9	10.2	6.1	chr3	59069641	59070929	(139224630)	C	MLT1I-int	LTR/ERVL-MaLR	(39)	1348	1	2586982
487	30.3	14.1	7.1	chr3	59070930	59071113	(139224446)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	218	2586982
26	0.0	6.2	0.0	chr3	59071114	59071145	(139224414)	+	(TTTTG)n	Simple_repeat	1	34	(0)	2586983
487	30.3	14.1	7.1	chr3	59071146	59071340	(139224219)	C	MLT1I	LTR/ERVL-MaLR	(194)	217	1	2586982
6171	15.2	1.3	0.5	chr3	59296465	59297596	(138997963)	+	L1PA14	LINE/L1	3211	4351	(2322)	2587308
879	16.6	3.5	0.0	chr3	59297592	59297754	(138997805)	C	L1PA14	LINE/L1	(6272)	417	249	2587309
239	13.5	0.0	0.0	chr3	59297769	59297805	(138997754)	+	THE1A	LTR/ERVL-MaLR	316	352	(3)	2587310
1271	9.8	2.5	0.0	chr3	59297809	59298002	(138997557)	+	THE1A-int	LTR/ERVL-MaLR	1	199	(1381)	2587310
1549	11.6	0.8	0.0	chr3	59298014	59298255	(138997304)	C	L1PA14	LINE/L1	(6440)	249	6	2587309
328	30.6	9.6	3.2	chr3	59298257	59298442	(138997117)	C	L2c	LINE/L2	(12)	3375	3177	2587311
934	30.0	14.5	2.1	chr3	59376310	59376927	(138918632)	C	L2a	LINE/L2	(1)	3425	2717	2587424
3468	17.8	8.6	1.4	chr3	65601547	65602713	(132692846)	+	L1MB8	LINE/L1	4903	6172	(6)	2597675
461	27.6	6.8	4.1	chr3	65602717	65603060	(132692499)	+	L1M5	LINE/L1	3108	3461	(2685)	2597674
678	32.2	10.0	3.4	chr3	65689887	65690297	(132605262)	+	MLT1K	LTR/ERVL-MaLR	7	447	(148)	2597831
1734	13.1	5.3	10.3	chr3	65690473	65690793	(132604766)	C	AluSz	SINE/Alu	(8)	304	1	2597832
3113	7.5	3.6	0.7	chr3	67833950	67834380	(130461179)	+	MLT2A1	LTR/ERVL	1	444	(0)	2601478
775	19.1	0.0	0.0	chr3	67834406	67834536	(130461023)	C	LSU-rRNA_Hsa	rRNA	(3210)	1825	1695	2601479
26021	6.7	0.3	0.6	chr3	67834537	67838001	(130457558)	+	HERVL-int	LTR/ERVL	2201	5654	(0)	2601480
11092	9.9	2.5	0.1	chr3	68311283	68312822	(129982737)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2602251
1970	15.3	2.5	3.0	chr3	68312824	68313187	(129982372)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	2602251
7895	7.8	0.0	0.0	chr3	68440964	68442002	(129853557)	+	HERVL-int	LTR/ERVL	2816	3854	(1800)	2602464
419	18.2	1.0	2.0	chr3	68442043	68442143	(129853416)	C	MSTC-int	LTR/ERVL-MaLR	(1550)	101	2	2602465
2013	14.0	10.8	2.3	chr3	68442149	68442535	(129853024)	C	MSTC	LTR/ERVL-MaLR	(4)	424	1	2602465
10593	12.8	1.4	0.7	chr3	70712016	70713600	(127581959)	C	MSTA-int	LTR/ERVL-MaLR	(23)	1608	1	2606189
1867	16.4	11.7	2.1	chr3	70713601	70713986	(127581573)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2606189
296	31.8	8.3	6.7	chr3	71610956	71611309	(126684250)	C	MER102b	DNA/hAT-Charlie	(4)	327	1	2607503
1396	18.8	0.0	0.0	chr3	71611318	71611540	(126684019)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	2607504
1781	17.6	1.3	1.3	chr3	72985306	72985612	(125309947)	+	AluJb	SINE/Alu	1	307	(5)	2610362
271	27.1	7.0	4.5	chr3	72985794	72985905	(125309654)	C	MLT1K	LTR/ERVL-MaLR	(4)	591	477	2610363
813	22.2	0.6	0.0	chr3	73324380	73324541	(124971018)	C	MER5A1	DNA/hAT-Charlie	(0)	166	4	2611038
15	7.9	3.7	0.0	chr3	73521677	73521703	(124773856)	+	(ATT)n	Simple_repeat	1	28	(0)	2611300
234	31.8	12.0	4.3	chr3	73521722	73521836	(124773723)	+	L2b	LINE/L2	3243	3367	(8)	2611301
1626	19.5	10.7	0.0	chr3	73521936	73522237	(124773322)	+	MER58B	DNA/hAT-Charlie	4	341	(0)	2611302
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
11778	15.2	1.6	1.8	chr3	78281007	78283872	(120011687)	+	L1PA10	LINE/L1	4	2882	(3579)	2617927
255	29.8	3.5	0.0	chr3	78595779	78595862	(119699697)	+	MamGypLTR2b	LTR/Gypsy	778	864	(58)	2618369
595	28.1	8.0	0.5	chr3	78596178	78596363	(119699196)	C	MIR	SINE/MIR	(57)	205	5	2618370
10272	11.6	3.4	0.1	chr3	82594202	82595726	(115699833)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	5	2623589
1740	15.4	0.7	4.3	chr3	82595729	82596033	(115699526)	C	THE1B	LTR/ERVL-MaLR	(0)	364	71	2623589
10672	12.3	0.5	2.7	chr3	86088683	86090298	(112205261)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2627828
2502	11.3	1.4	0.8	chr3	86090303	86090659	(112204900)	C	THE1B	LTR/ERVL-MaLR	(5)	359	1	2627828
2009	13.8	8.4	0.8	chr3	87194901	87195252	(111100307)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2629236
9307	13.3	5.7	0.4	chr3	87195253	87196748	(111098811)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2629236
1858	12.9	10.8	0.9	chr3	87811791	87812133	(110483426)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2629980
9472	11.2	9.8	0.5	chr3	87812137	87813612	(110481947)	+	THE1D-int	LTR/ERVL-MaLR	4	1631	(0)	2629980
10993	12.2	0.4	0.0	chr3	95606560	95608129	(102687430)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	2635692
1973	14.4	5.0	2.8	chr3	95608130	95608485	(102687074)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2635692
686	22.7	8.0	3.7	chr3	95776200	95776414	(102519145)	C	L1M5	LINE/L1	(364)	5809	5585	2635898
2309	14.0	1.6	0.3	chr3	95776418	95776776	(102518783)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2635900
275	9.9	4.4	0.0	chr3	95776777	95776825	(102518734)	+	THE1B-int	LTR/ERVL-MaLR	1	51	(1529)	2635900
24747	5.7	0.4	0.1	chr3	95776826	95780762	(102514797)	+	L1PA5	LINE/L1	2187	6138	(16)	2635901
10371	12.8	1.5	0.0	chr3	96051822	96053377	(102242182)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2636235
1831	18.6	6.9	1.4	chr3	96053379	96053722	(102241837)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2636235
5267	20.4	1.4	2.8	chr3	96053723	96053988	(102241571)	C	MSTA-int	LTR/ERVL-MaLR	(1388)	263	4	2636234
51	13.5	0.0	0.0	chr3	97168534	97168614	(101126945)	+	(TC)n	Simple_repeat	1	81	(0)	2637488
857	18.0	11.8	2.0	chr3	97168617	97168814	(101126745)	+	MSTA	LTR/ERVL-MaLR	207	426	(2)	2637487
895	11.3	4.4	0.0	chr3	97168817	97168967	(101126592)	+	MSTA-int	LTR/ERVL-MaLR	1	158	(1473)	2637487
2044	10.6	8.7	1.7	chr3	97707665	97708018	(100587541)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2638144
11446	10.8	1.2	0.9	chr3	97708019	97709638	(100585921)	+	THE1D-int	LTR/ERVL-MaLR	1	1625	(6)	2638144
50	2.0	0.0	0.0	chr3	100409957	100410006	(97885553)	+	(ATCT)n	Simple_repeat	1	50	(0)	2641684
2489	19.9	17.6	0.6	chr3	100410054	100410677	(97884882)	+	MLT1-int	LTR/ERVL-MaLR	1	730	(641)	2641685
2262	22.2	4.3	1.1	chr3	102992367	102992886	(95302673)	+	MER68	LTR/ERVL	3	539	(24)	2645260
658	14.4	0.0	0.0	chr3	102992922	102993018	(95302541)	C	THE1-int	LTR/ERVL-MaLR	(342)	1238	1142	2645261
285	5.7	0.0	0.0	chr3	102993030	102993064	(95302495)	C	THE1C	LTR/ERVL-MaLR	(0)	364	330	2645262
919	9.9	0.0	0.0	chr3	102993056	102993176	(95302383)	C	THE1C	LTR/ERVL-MaLR	(254)	121	1	2645262
1080	8.7	6.5	0.0	chr3	102993227	102993399	(95302160)	+	THE1C-int	LTR/ERVL-MaLR	1447	1631	(0)	2645263
10105	10.4	6.0	0.5	chr3	104167112	104168602	(94126957)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	1	2646727
1942	17.9	3.3	2.2	chr3	104168603	104168962	(94126597)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2646727
919	33.9	7.9	4.3	chr3	104820409	104820922	(93474637)	C	LTR16E2	LTR/ERVL	(25)	543	10	2647452
825	14.0	1.2	10.4	chr3	104820936	104821118	(93474441)	+	THE1B	LTR/ERVL-MaLR	194	359	(5)	2647453
10695	12.2	0.6	1.1	chr3	104821131	104822638	(93472921)	+	THE1B-int	LTR/ERVL-MaLR	1	1501	(79)	2647453
4181	12.1	0.3	0.8	chr3	105971288	105971889	(92323670)	C	THE1C-int	LTR/ERVL-MaLR	(7)	1573	975	2648940
2605	10.8	1.8	2.0	chr3	105971901	105972298	(92323261)	C	THE1C-int	LTR/ERVL-MaLR	(1183)	397	1	2648940
2214	14.4	1.9	1.9	chr3	105972299	105972673	(92322886)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2648940
1544	16.6	5.9	6.7	chr3	106255987	106256329	(92039230)	+	MER61A	LTR/ERV1	1	340	(1)	2649287
1740	20.4	3.1	8.9	chr3	106256347	106256829	(92038730)	+	MER61-int	LTR/ERV1	19	472	(4745)	2649287
2019	12.5	7.5	3.2	chr3	106531146	106531491	(91764068)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2649643
5205	11.8	1.3	0.0	chr3	106531494	106532232	(91763327)	+	THE1B-int	LTR/ERVL-MaLR	1	749	(831)	2649643
4459	23.9	8.6	10.3	chr3	106622883	106624370	(91671189)	C	MLT1A1-int	LTR/ERVL-MaLR	(275)	1460	1	2649751
1465	24.3	5.0	2.0	chr3	106624376	106624766	(91670793)	C	MLT1A1	LTR/ERVL-MaLR	(5)	403	1	2649751
10322	11.3	1.5	1.0	chr3	108277724	108279290	(90016269)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	1	2652072
2162	11.4	3.9	2.6	chr3	108279294	108279645	(90015914)	C	THE1B	LTR/ERVL-MaLR	(7)	357	1	2652072
10612	11.0	3.8	0.1	chr3	110948508	110950028	(87345531)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2655914
2118	14.8	3.3	3.0	chr3	110950029	110950391	(87345168)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2655914
12581	20.4	4.2	1.1	chr3	111261054	111265703	(87029856)	+	L1MB2	LINE/L1	1458	6371	(36)	2656314
2514	15.4	4.2	2.4	chr3	112021458	112021875	(86273684)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2657277
6577	20.0	9.4	5.4	chr3	112021877	112023388	(86272171)	+	MSTB-int	LTR/ERVL-MaLR	3	1580	(0)	2657277
2887	15.5	1.1	2.5	chr3	112587367	112587923	(85707636)	C	L1MB3	LINE/L1	(3)	6180	5632	2658043
726	19.1	8.5	1.1	chr3	112767894	112768068	(85527491)	+	LTR54B	LTR/ERV1	308	496	(2)	2658276
2365	9.3	2.7	0.0	chr3	112768160	112768448	(85527111)	+	AluSc8	SINE/Alu	1	297	(14)	2658277
17449	12.9	2.9	0.2	chr3	114273484	114276065	(84019494)	C	L1M1	LINE/L1	(4900)	2665	13	2660546
537	27.9	17.1	2.1	chr3	114276113	114276320	(84019239)	C	L1MC5a	LINE/L1	(0)	2777	2513	2660555
58	1.5	2.9	2.8	chr3	114384101	114384170	(83911389)	+	(TC)n	Simple_repeat	1	72	(0)	2660681
4081	8.3	0.4	0.0	chr3	115967017	115967558	(82328001)	C	THE1B-int	LTR/ERVL-MaLR	(1027)	553	10	2662836
2259	13.7	1.9	2.5	chr3	115967564	115967929	(82327630)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2662836
8707	15.4	2.1	0.1	chr3	115967930	115969271	(82326288)	C	L1M1	LINE/L1	(6181)	1384	15	2662837
1567	14.5	0.0	0.0	chr3	116810718	116810945	(81484614)	+	LTR1F1	LTR/ERV1	1	228	(501)	2663997
622	12.1	2.9	0.0	chr3	116810945	116811043	(81484516)	C	THE1B-int	LTR/ERVL-MaLR	(1478)	102	1	2663998
2245	11.5	4.7	2.5	chr3	116811044	116811399	(81484160)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2663998
2628	12.3	0.0	0.5	chr3	118092038	118092412	(80203147)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	2665761
9528	12.3	3.1	5.9	chr3	118092413	118094039	(80201520)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2665761
11825	9.7	0.2	0.3	chr3	119117601	119119178	(79176381)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	2667117
2250	11.5	4.7	1.7	chr3	119119179	119119531	(79176028)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2667117
1817	16.9	13.1	1.3	chr3	119281437	119281813	(79013746)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2667314
12166	9.9	0.7	0.0	chr3	119281814	119283432	(79012127)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2667314
1293	12.9	0.0	0.0	chr3	119753665	119753865	(78541694)	C	L1PB1	LINE/L1	(1)	6150	5950	2668129
1427	28.0	7.7	7.8	chr3	119753866	119753895	(78541664)	+	L1MEg	LINE/L1	1940	1966	(5367)	2668128
617	14.9	0.0	0.0	chr3	119753907	119754000	(78541559)	+	MLT1B	LTR/ERVL-MaLR	293	386	(4)	2668130
2097	21.5	2.1	0.0	chr3	119754005	119754508	(78541051)	+	MLT1B-int	LTR/ERVL-MaLR	1	661	(710)	2668130
716	15.6	0.8	0.8	chr3	120001121	120001249	(78294310)	+	MSTB	LTR/ERVL-MaLR	68	196	(230)	2668477
845	15.2	1.6	0.0	chr3	120001250	120001374	(78294185)	+	AluSx	SINE/Alu	1	127	(185)	2668479
1236	18.2	2.9	0.8	chr3	120001394	120001631	(78293928)	+	MSTB	LTR/ERVL-MaLR	184	426	(0)	2668477
10362	10.9	7.2	0.7	chr3	120154397	120155918	(78139641)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2668742
2184	12.7	3.1	3.9	chr3	120155921	120156304	(78139255)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2668744
258	25.5	12.2	2.1	chr3	120821812	120821907	(77473652)	C	MLT1M	LTR/ERVL-MaLR	(3)	669	563	2669713
445	32.0	5.5	0.0	chr3	124180515	124180720	(74114839)	+	MIRb	SINE/MIR	45	262	(6)	2674890
1053	24.8	13.0	8.5	chr3	124180882	124180958	(74114601)	C	Tigger16a	DNA/TcMar-Tigger	(8)	949	887	2674891
1689	13.7	0.0	7.2	chr3	124180959	124181236	(74114323)	+	AluSz6	SINE/Alu	11	268	(44)	2674892
2335	10.7	4.7	2.8	chr3	125570522	125570878	(72724681)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2677317
12007	8.6	0.8	0.1	chr3	125570879	125572447	(72723112)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2677317
2126	14.7	4.7	2.0	chr3	125808859	125809212	(72486347)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2677707
11099	10.7	1.8	1.1	chr3	125809213	125810780	(72484779)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2677707
241	22.7	1.5	5.7	chr3	126976236	126976305	(71319254)	+	MER102a	DNA/hAT-Charlie	262	328	(2)	2679355
207	32.4	7.6	3.3	chr3	126976495	126976588	(71318971)	C	L2c	LINE/L2	(189)	3198	3102	2679356
890	14.4	0.8	0.0	chr3	126976589	126976720	(71318839)	+	FLAM_C	SINE/Alu	1	133	(10)	2679357
1835	13.4	8.8	1.1	chr3	129840532	129840879	(68454680)	+	THE1D	LTR/ERVL-MaLR	1	377	(4)	2684496
2943	14.6	0.9	6.5	chr3	129840884	129841305	(68454254)	+	THE1D-int	LTR/ERVL-MaLR	1	422	(1229)	2684496
10849	10.7	2.9	1.1	chr3	130202219	130203769	(68091790)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2685169
1982	15.6	4.7	3.3	chr3	130203770	130204128	(68091431)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2685169
619	32.2	11.3	2.4	chr3	130516186	130516532	(67779027)	+	L2c	LINE/L2	2993	3382	(5)	2685611
49388	6.3	0.8	1.0	chr3	132303682	132309950	(65985609)	+	Harlequin-int	LTR/ERV1	635	6895	(1)	2688264
7518	19.9	6.0	4.8	chr3	132564721	132565614	(65729945)	+	L1MD1	LINE/L1	20	1149	(5484)	2688626
11847	8.5	1.3	0.2	chr3	133098429	133099989	(65195570)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	2689414
2420	9.2	4.5	0.0	chr3	133099992	133100329	(65195230)	C	THE1A	LTR/ERVL-MaLR	(1)	354	1	2689414
712	17.4	5.0	2.7	chr3	134113665	134113848	(64181711)	+	L1M2	LINE/L1	2806	2993	(3849)	2690952
2056	14.8	2.6	3.3	chr3	134113843	134114261	(64181298)	+	L1MA9	LINE/L1	6099	6514	(384)	2690949
266	18.5	0.0	1.8	chr3	136637805	136637859	(61657700)	+	L2a	LINE/L2	3306	3359	(67)	2694755
1115	11.6	0.9	15.9	chr3	136637873	136638123	(61657436)	C	AluJr	SINE/Alu	(14)	298	86	2694756
2303	10.0	0.0	2.6	chr3	136638126	136638434	(61657125)	C	AluSq2	SINE/Alu	(12)	301	1	2694757
247	14.8	19.3	4.3	chr3	138388315	138388406	(59907153)	+	MIRb	SINE/MIR	103	211	(51)	2697452
2366	11.4	0.0	0.9	chr3	138388417	138388731	(59906828)	+	AluSz6	SINE/Alu	1	312	(0)	2697453
984	29.1	6.0	10.5	chr3	139511582	139512139	(58783420)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	12	2699433
284	22.1	12.8	0.0	chr3	139512140	139512234	(58783325)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	454	2699434
1526	16.6	2.0	2.6	chr3	142208293	142208596	(56086963)	C	L1MB4	LINE/L1	(996)	5150	4849	2703743
415	33.7	8.9	10.3	chr3	142208719	142208867	(56086692)	C	L2b	LINE/L2	(50)	3325	3202	2703745
2612	5.4	0.0	0.0	chr3	142208868	142209161	(56086398)	+	AluYk3	SINE/Alu	1	294	(17)	2703746
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
11109	11.5	0.5	0.1	chr3	144714687	144716254	(53579305)	C	THE1A-int	LTR/ERVL-MaLR	(7)	1573	1	2707431
2273	11.8	1.4	0.8	chr3	144716257	144716607	(53578952)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	2707431
4397	24.0	0.7	0.0	chr3	145000937	145001866	(53293693)	C	MSTB-int	LTR/ERVL-MaLR	(714)	937	1	2707780
1967	20.9	4.7	1.2	chr3	145001867	145002277	(53293282)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2707780
11070	10.2	0.6	1.3	chr3	145060700	145062290	(53233269)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2707868
1934	15.7	5.2	2.3	chr3	145062291	145062643	(53232916)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2707868
8957	14.6	3.9	5.1	chr3	145241197	145242795	(53052764)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	2	2708088
1640	13.8	24.4	0.0	chr3	145242797	145243101	(53052458)	C	THE1C	LTR/ERVL-MaLR	(0)	381	1	2708088
2261	19.1	3.0	0.5	chr3	146359596	146360010	(51935549)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2709477
5483	19.9	0.3	0.8	chr3	146360015	146360360	(51935199)	+	MSTB-int	LTR/ERVL-MaLR	5	349	(1302)	2709477
2366	16.1	1.4	3.9	chr3	146360361	146360799	(51934760)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2709478
8527	19.7	1.7	0.9	chr3	147857663	147859300	(50436259)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	2711323
1892	20.8	4.0	5.3	chr3	147859301	147859732	(50435827)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2711323
2494	10.9	1.9	0.8	chr3	149219333	149219692	(49075867)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2713235
1081	9.7	1.3	0.0	chr3	149219693	149219846	(49075713)	+	THE1B-int	LTR/ERVL-MaLR	1	156	(1424)	2713235
60	1.8	0.0	0.0	chr3	150259228	150259283	(48036276)	+	(AT)n	Simple_repeat	1	56	(0)	2714956
381	25.9	1.8	0.0	chr3	150259500	150259607	(48035952)	C	LTR67B	LTR/ERVL	(7)	613	504	2714957
550	27.3	6.0	0.6	chr3	150259842	150260014	(48035545)	C	LTR67B	LTR/ERVL	(419)	201	19	2714957
1017	21.8	5.0	4.0	chr3	154363280	154363556	(43932003)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	129	2721080
3283	14.2	8.0	1.1	chr3	154363557	154364125	(43931434)	+	LTR27D	LTR/ERV1	1	612	(3)	2721081
1486	27.4	6.0	6.7	chr3	156030796	156032009	(42263550)	C	L2a	LINE/L2	(4)	3422	2234	2723465
1939	14.6	0.7	1.6	chr3	160064002	160064309	(38231250)	C	AluSz	SINE/Alu	(7)	305	1	2729231
2490	12.3	1.6	0.3	chr3	160469365	160469732	(37825827)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	2729829
10137	11.8	3.0	0.9	chr3	160469735	160471211	(37824348)	+	THE1C-int	LTR/ERVL-MaLR	1	1508	(72)	2729829
52502	6.6	0.8	1.6	chr3	162044982	162048881	(36246678)	C	Harlequin-int	LTR/ERV1	(0)	6896	2997	2732166
2456	17.4	1.4	0.7	chr3	162662167	162662607	(35632952)	C	MER31A	LTR/ERV1	(9)	476	33	2732879
8755	14.4	6.6	1.2	chr3	165505748	165507233	(32788326)	C	THE1D-int	LTR/ERVL-MaLR	(7)	1573	3	2736333
1567	15.0	3.9	5.8	chr3	165507236	165507546	(32788013)	C	THE1D	LTR/ERVL-MaLR	(0)	381	77	2736333
1662	16.9	3.0	3.3	chr3	165507568	165507872	(32787687)	C	THE1B	LTR/ERVL-MaLR	(60)	304	1	2736334
1165	13.0	5.9	4.2	chr3	171485468	171485615	(26809944)	+	L1MB4	LINE/L1	5959	6115	(65)	2744617
2042	15.7	2.7	0.0	chr3	171485616	171485901	(26809658)	C	AluJb	SINE/Alu	(18)	294	1	2744618
1165	13.0	5.9	4.2	chr3	171485902	171485968	(26809591)	+	L1MB4	LINE/L1	6116	6178	(2)	2744617
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
2126	13.8	4.7	2.8	chr3	173194678	173195034	(25100525)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2747243
8386	11.0	0.7	0.1	chr3	173195035	173196185	(25099374)	+	THE1B-int	LTR/ERVL-MaLR	1	1158	(422)	2747243
19183	13.9	2.7	3.4	chr3	174892941	174894308	(23401251)	+	L1MA1	LINE/L1	2642	4012	(3553)	2749623
2446	9.8	0.0	0.9	chr3	174894309	174894624	(23400935)	+	AluSq	SINE/Alu	1	313	(0)	2749625
19183	11.6	2.7	2.4	chr3	174894625	174897831	(23397728)	+	L1MA1	LINE/L1	4013	7238	(483)	2749623
8280	10.2	0.9	2.4	chr3	175438858	175440912	(22854647)	C	L1PB1	LINE/L1	(2)	6149	4125	2750377
11170	10.4	1.0	1.3	chr3	175734578	175735449	(22560110)	C	THE1B-int	LTR/ERVL-MaLR	(717)	863	2	2750787
2039	11.9	5.8	3.4	chr3	175735451	175735805	(22559754)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2750787
4024	24.5	6.1	3.6	chr3	177001938	177003335	(21292224)	+	L1ME1	LINE/L1	3008	4442	(1704)	2752430
1349	12.8	2.6	17.8	chr3	179347113	179347471	(18948088)	C	AluJo	SINE/Alu	(1)	311	9	2756042
11319	10.0	0.3	2.2	chr3	180006925	180008535	(18287024)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2757230
2641	7.9	0.3	0.6	chr3	180008536	180008891	(18286668)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2757230
11337	10.4	0.5	0.1	chr3	180775760	180777333	(17518226)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2758307
2133	14.2	3.6	3.0	chr3	180777334	180777695	(17517864)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2758307
16	12.6	5.6	0.0	chr3	181712034	181712069	(16583490)	+	GA-rich	Low_complexity	1	38	(0)	2759750
14	19.9	2.4	2.3	chr3	181712415	181712456	(16583103)	+	(GGC)n	Simple_repeat	1	43	(0)	2759751
11876	9.2	2.3	1.1	chr3	183419892	183420279	(14875280)	C	THE1D-int	LTR/ERVL-MaLR	(1243)	388	1	2762642
2013	14.0	4.5	4.5	chr3	183420280	183420319	(14875240)	C	THE1D	LTR/ERVL-MaLR	(0)	381	347	2762642
2225	9.9	0.7	0.3	chr3	183420320	183420612	(14874947)	+	AluSg4	SINE/Alu	1	294	(16)	2762645
183	30.3	13.6	5.3	chr3	185939630	185939723	(12355836)	+	MIR1_Amn	SINE/MIR	102	204	(26)	2767405
694	8.3	14.6	3.7	chr3	185939731	185939839	(12355720)	C	AluJb	SINE/Alu	(12)	300	178	2767406
4304	18.0	4.5	4.2	chr3	185939859	185940570	(12354989)	C	L1MB8	LINE/L1	(0)	6178	5474	2767407
212	31.7	4.7	4.1	chr3	187924474	187924629	(10370930)	+	L2a	LINE/L2	3238	3426	(0)	2770957
373	30.1	0.8	0.0	chr3	187925057	187925179	(10370380)	C	MIR3	SINE/MIR	(37)	171	48	2770958
2573	9.3	0.6	0.3	chr3	192774162	192774515	(5521044)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2778436
10980	10.2	4.0	0.0	chr3	192774516	192776032	(5519527)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2778436
2298	15.6	5.8	0.2	chr3	193082547	193082739	(5212820)	+	MSTA	LTR/ERVL-MaLR	1	217	(211)	2778969
49	0.0	0.0	0.0	chr3	193082740	193082781	(5212778)	+	(CT)n	Simple_repeat	1	42	(0)	2778970
2298	15.6	5.8	0.2	chr3	193082782	193082991	(5212568)	+	MSTA	LTR/ERVL-MaLR	218	427	(1)	2778969
6379	18.1	2.6	0.9	chr3	193082992	193084141	(5211418)	+	MSTA-int	LTR/ERVL-MaLR	1	1171	(480)	2778969
5649	24.1	5.9	5.2	chr3	193533249	193535022	(4760537)	+	L1MD1	LINE/L1	17	1803	(4830)	2779631
2288	9.4	1.0	0.7	chr3	194937471	194937777	(3357782)	+	AluSp	SINE/Alu	1	308	(5)	2782097
2123	8.8	0.0	5.9	chr3	195742098	195742402	(2553157)	C	AluSx1	SINE/Alu	(24)	288	2	2783580
5371	19.1	8.3	7.5	chr3	195742403	195742696	(2552863)	C	L1MC1	LINE/L1	(870)	5276	4943	2783576
837	15.0	0.0	0.0	chr3	196964740	196964859	(1330700)	C	AluJb	SINE/Alu	(15)	297	178	2786128
297	24.8	16.0	0.8	chr3	196964868	196964989	(1330570)	C	MIRb	SINE/MIR	(107)	161	18	2786129
2069	13.8	6.6	1.1	chr3	196965135	196965494	(1330065)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2786130
2021	10.3	12.4	3.0	chr3	197359319	197359647	(935912)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2786792
11713	8.9	2.9	0.3	chr3	197359648	197361185	(934374)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2786792
6158	17.6	6.7	2.2	chr4	3350712	3352370	(186862185)	C	MER65-int	LTR/ERV1	(2923)	1948	81	2793094
2580	13.2	3.4	2.0	chr4	3352453	3352891	(186861664)	C	MER65A	LTR/ERV1	(0)	445	1	2793094
10498	11.7	6.6	0.3	chr4	3379882	3381408	(186833147)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2793118
2406	11.1	4.3	0.6	chr4	3381411	3381771	(186832784)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2793118
265	31.4	7.3	0.0	chr4	3411036	3411177	(186803378)	C	L1P1	LINE/L1	(1039)	5107	4956	2793151
1741	17.8	6.7	1.4	chr4	5221877	5222230	(184992325)	+	MLT1A1	LTR/ERVL-MaLR	35	408	(0)	2796229
7892	21.8	6.3	3.6	chr4	5222231	5223532	(184991023)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1366	(369)	2796229
1977	12.8	9.1	1.5	chr4	5549795	5550128	(184664427)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	2796737
12400	7.9	0.6	0.0	chr4	5550129	5551694	(184662861)	+	THE1B-int	LTR/ERVL-MaLR	1	1575	(5)	2796737
30	19.9	0.0	6.5	chr4	5893053	5893144	(184321411)	+	G-rich	Low_complexity	1	92	(0)	2797373
305	28.4	0.0	0.0	chr4	7832555	7832621	(182381934)	+	L1MEg	LINE/L1	9	75	(6009)	2800736
6008	8.1	2.0	1.9	chr4	7832614	7833589	(182380966)	+	L1PB1	LINE/L1	4599	5587	(564)	2800737
511	32.5	11.9	1.1	chr4	8185503	8185869	(182028686)	C	L1MC3	LINE/L1	(1884)	5998	5587	2801373
3020	6.7	0.9	0.0	chr4	11318167	11318582	(178895973)	+	THE1A-int	LTR/ERVL-MaLR	1	420	(1160)	2806010
2425	15.5	2.8	0.7	chr4	13508476	13508892	(176705663)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2809413
2552	21.4	2.8	3.8	chr4	13508893	13509787	(176704768)	+	MSTB-int	LTR/ERVL-MaLR	1	867	(868)	2809413
2272	12.2	1.1	1.1	chr4	13824206	13824560	(176389995)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2809918
11538	10.1	0.5	0.1	chr4	13824561	13826133	(176388422)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2809918
5461	24.4	12.4	2.9	chr4	14841357	14842920	(175371635)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	2811641
832	13.9	0.8	0.0	chr4	14842921	14843042	(175371513)	C	MSTD	LTR/ERVL-MaLR	(0)	396	274	2811641
346	25.7	0.0	0.0	chr4	14843031	14843104	(175371451)	C	MSTD	LTR/ERVL-MaLR	(248)	117	44	2811641
12374	9.2	0.8	1.6	chr4	15135234	15136826	(175077729)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2812146
2436	12.2	3.0	2.2	chr4	15136827	15137187	(175077368)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2812146
1990	15.0	5.8	0.8	chr4	15206348	15206709	(175007846)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2812256
2073	11.3	0.8	15.2	chr4	15206712	15207171	(175007384)	+	THE1D-int	LTR/ERVL-MaLR	3	395	(1236)	2812256
10597	13.4	1.6	0.2	chr4	15307675	15309280	(174905275)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	2812417
2014	12.8	5.5	3.7	chr4	15309284	15309657	(174904898)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2812417
1800	17.2	14.5	1.4	chr4	16275936	16276306	(173938249)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2814057
10944	11.7	2.6	0.1	chr4	16276307	16277895	(173936660)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2814057
11790	8.3	0.9	0.5	chr4	17860562	17862134	(172352421)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2817037
2078	13.9	6.9	2.6	chr4	17862135	17862482	(172352073)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2817037
2278	14.2	2.1	0.8	chr4	18912216	18912591	(171301964)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2818666
7849	13.7	1.7	0.3	chr4	18912595	18913778	(171300777)	+	THE1D-int	LTR/ERVL-MaLR	4	1204	(427)	2818666
8767	14.6	4.4	4.2	chr4	19450222	19451799	(170762756)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2819496
1787	17.1	1.9	5.6	chr4	19451800	19451868	(170762687)	C	THE1C	LTR/ERVL-MaLR	(0)	375	315	2819496
2304	11.4	0.0	1.3	chr4	19451869	19452183	(170762372)	+	AluY	SINE/Alu	1	311	(0)	2819497
11534	9.4	0.8	0.4	chr4	20781765	20783338	(169431217)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2821412
2219	11.6	2.3	0.6	chr4	20783339	20783684	(169430871)	C	THE1A	LTR/ERVL-MaLR	(0)	355	4	2821412
9606	12.9	7.5	0.8	chr4	22545580	22547051	(167667504)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	2	2824135
2058	16.3	2.4	2.4	chr4	22547053	22547423	(167667132)	C	THE1D	LTR/ERVL-MaLR	(0)	375	5	2824135
3069	25.2	8.5	3.2	chr4	24954224	24955001	(165259554)	C	MLT-int	LTR/ERVL-MaLR	(444)	1291	469	2828034
247	13.5	2.6	0.0	chr4	24955030	24955066	(165259489)	C	MLT1A1-int	LTR/ERVL-MaLR	(1447)	42	5	2828035
1770	16.8	10.8	3.5	chr4	24955071	24955447	(165259108)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2828035
646	29.9	7.8	8.4	chr4	25093020	25093509	(165121046)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	124	2828287
1723	17.9	9.0	6.4	chr4	25522892	25523299	(164691256)	+	MLT1C	LTR/ERVL-MaLR	36	467	(0)	2829099
296	33.6	1.3	3.8	chr4	25523300	25523359	(164691196)	+	L3	LINE/CR1	3840	3895	(204)	2829094
401	31.2	1.3	1.3	chr4	25523432	25523587	(164690968)	C	MIRb	SINE/MIR	(76)	192	37	2829101
1311	23.4	6.8	2.8	chr4	26499473	26499824	(163714731)	+	MLT1J	LTR/ERVL-MaLR	1	367	(145)	2831161
31	0.0	0.0	0.0	chr4	26499830	26499858	(163714697)	+	(TTAT)n	Simple_repeat	1	29	(0)	2831162
1100	12.0	0.0	0.0	chr4	26499859	26500000	(163714555)	C	AluSz6	SINE/Alu	(30)	282	141	2831163
1582	28.4	4.2	4.4	chr4	27405303	27405894	(162808661)	+	MLT1G	LTR/ERVL-MaLR	1	591	(0)	2832551
2663	29.1	7.4	8.5	chr4	27405899	27407105	(162807450)	+	MLT1G-int	LTR/ERVL-MaLR	5	1177	(232)	2832551
10803	11.5	1.3	0.0	chr4	29786780	29788339	(160426216)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2835862
2121	14.6	1.9	2.7	chr4	29788340	29788706	(160425849)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2835862
1911	14.2	3.8	1.6	chr4	30415786	30416092	(159798463)	+	THE1B	LTR/ERVL-MaLR	51	364	(0)	2836680
11108	10.9	1.4	0.0	chr4	30416093	30417647	(159796908)	+	THE1B-int	LTR/ERVL-MaLR	1	1577	(3)	2836680
2328	11.8	2.4	1.9	chr4	31915215	31915585	(158298970)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	2838735
9321	14.4	4.0	1.0	chr4	31915586	31917117	(158297438)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2838735
2362	8.5	1.8	0.3	chr4	35950323	35950651	(154263904)	C	THE1D-int	LTR/ERVL-MaLR	(1295)	336	3	2844096
1895	16.2	4.7	2.2	chr4	35950654	35951024	(154263531)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2844096
11557	10.2	0.3	0.0	chr4	37203393	37204963	(153009592)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	2845814
2054	14.2	5.0	2.0	chr4	37204964	37205314	(153009241)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	2845814
24	11.3	4.8	4.5	chr4	38663970	38664032	(151550523)	+	G-rich	Low_complexity	1	66	(0)	2848197
12	25.3	3.8	1.8	chr4	38664311	38664363	(151550192)	+	(CGCC)n	Simple_repeat	1	55	(0)	2848198
2972	16.3	2.5	3.2	chr4	39019679	39020407	(151194148)	C	L1MA7	LINE/L1	(8)	6292	5606	2848827
777	17.2	0.0	1.6	chr4	39020409	39020530	(151194025)	C	FLAM_A	SINE/Alu	(18)	124	5	2848828
246	31.0	2.3	1.2	chr4	39020466	39020550	(151194005)	+	SVA_B	Retroposon/SVA	122	207	(1176)	2848829
2320	9.9	0.7	0.0	chr4	39020554	39020847	(151193708)	C	AluSc	SINE/Alu	(13)	296	1	2848830
1822	14.5	2.9	4.7	chr4	41992052	41992369	(148222186)	+	AluJb	SINE/Alu	1	312	(0)	2854918
1676	17.0	7.3	5.9	chr4	42912781	42913155	(147301400)	+	THE1C	LTR/ERVL-MaLR	1	381	(0)	2856255
9873	12.5	3.9	1.1	chr4	42913157	42914684	(147299871)	+	THE1C-int	LTR/ERVL-MaLR	2	1574	(6)	2856255
233	20.9	16.4	1.2	chr4	44678895	44679010	(145535545)	+	MIR	SINE/MIR	5	138	(130)	2858628
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
285	26.1	0.0	1.8	chr4	49577533	49577634	(140636921)	C	HSAT5	Satellite	(1)	100	1	2865283
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
3155	12.4	0.6	0.0	chr4	49586304	49586801	(140627754)	+	L1P3	LINE/L1	4555	5055	(1091)	2865291
1801	15.2	1.6	2.5	chr4	52272798	52273227	(137941328)	+	L1M3	LINE/L1	5182	5614	(557)	2865950
1474	12.8	0.0	0.0	chr4	52273250	52273476	(137941079)	+	L1PREC2	LINE/L1	565	791	(6750)	2865953
9545	12.2	2.5	4.3	chr4	52273474	52274408	(137940147)	+	L1PREC2	LINE/L1	2060	3032	(4509)	2865953
2632	19.6	0.8	5.9	chr4	53082506	53083048	(137131507)	+	MLT2B1	LTR/ERVL	6	520	(0)	2867218
1672	18.2	1.9	0.9	chr4	53083053	53083368	(137131187)	+	MLT-int	LTR/ERVL-MaLR	5	323	(1412)	2867219
5790	21.2	4.2	3.4	chr4	54924383	54925737	(135288818)	C	MLT1C-int	LTR/ERVL-MaLR	(5)	1366	1	2870106
1452	21.4	8.0	3.3	chr4	54925758	54926149	(135288406)	C	MLT2C2	LTR/ERVL	(52)	412	1	2870107
14	16.2	4.7	2.2	chr4	55546253	55546295	(134668260)	+	(CCGCC)n	Simple_repeat	1	45	(0)	2871090
19	25.8	2.6	2.5	chr4	55546401	55546477	(134668078)	+	(CCCGCCC)n	Simple_repeat	1	79	(0)	2871091
13	23.8	5.4	3.9	chr4	56907974	56908047	(133306508)	+	(CCGAGGC)n	Simple_repeat	1	78	(0)	2873604
2201	12.9	2.1	1.8	chr4	57691756	57692135	(132522420)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2874830
10810	12.9	1.7	0.2	chr4	57692140	57693742	(132520813)	+	THE1D-int	LTR/ERVL-MaLR	5	1631	(0)	2874830
10937	10.3	1.9	0.1	chr4	61322332	61323882	(128890673)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2879261
1946	14.0	6.0	2.6	chr4	61323883	61324233	(128890322)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2879261
2045	13.8	11.5	1.8	chr4	64427988	64428371	(125786184)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	2883151
9516	16.1	2.0	0.8	chr4	64428375	64429984	(125784571)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	2883151
855	21.6	2.3	3.6	chr4	65596235	65596455	(124618100)	+	MER20	DNA/hAT-Charlie	2	219	(0)	2884569
38	4.1	1.9	1.9	chr4	65596465	65596516	(124618039)	+	(AAAC)n	Simple_repeat	1	53	(0)	2884570
1940	17.3	4.7	0.0	chr4	65677812	65678158	(124536397)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2884674
9974	12.2	1.8	3.0	chr4	65678159	65679758	(124534797)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2884674
10748	11.9	2.9	0.5	chr4	68269552	68271143	(121943412)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2888102
1491	14.4	12.6	1.5	chr4	68271144	68271481	(121943074)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2888102
18	21.1	1.7	4.9	chr4	68349770	68349829	(121864726)	+	(CCG)n	Simple_repeat	1	61	(0)	2888211
341	18.2	12.7	3.5	chr4	68359361	68359474	(121855081)	+	LTR33	LTR/ERVL	390	515	(0)	2888234
16	0.0	0.0	0.0	chr4	68360318	68360337	(121854218)	+	(CAC)n	Simple_repeat	1	20	(0)	2888236
2512	9.1	1.1	0.0	chr4	71408818	71409168	(118805387)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2892188
11348	9.4	1.0	0.0	chr4	71409169	71410681	(118803874)	+	THE1A-int	LTR/ERVL-MaLR	1	1528	(52)	2892188
2387	14.0	0.8	1.3	chr4	72864203	72864579	(117349976)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2894027
8965	13.1	4.8	1.2	chr4	72864583	72866103	(117348452)	+	THE1C-int	LTR/ERVL-MaLR	4	1580	(0)	2894027
10869	20.3	3.8	1.6	chr4	73630906	73636543	(116578012)	+	L1PB3	LINE/L1	56	4936	(1979)	2895149
13	7.6	7.1	0.0	chr4	73944543	73944570	(116269985)	+	(GGGT)n	Simple_repeat	1	30	(0)	2895544
12025	8.3	0.8	0.0	chr4	75531978	75533545	(114681010)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2897570
1192	11.2	1.1	2.6	chr4	75533546	75533737	(114680818)	C	THE1B	LTR/ERVL-MaLR	(0)	364	176	2897570
3836	3.5	0.2	0.0	chr4	75533766	75534222	(114680333)	C	L1PA5	LINE/L1	(4)	6150	5693	2897571
2264	14.1	2.2	0.6	chr4	78010831	78011188	(112203367)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2901563
8625	11.9	1.0	3.9	chr4	78011189	78011597	(112202958)	+	THE1B-int	LTR/ERVL-MaLR	1	399	(1181)	2901563
1908	20.3	6.5	2.9	chr4	78039405	78039890	(112174665)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2901607
2765	25.7	8.6	10.0	chr4	78039891	78041350	(112173205)	+	MLT1D-int	LTR/ERVL-MaLR	1	1413	(76)	2901607
2118	14.4	3.0	2.5	chr4	79659304	79659665	(110554890)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2903888
11369	10.2	0.9	0.1	chr4	79659666	79661232	(110553323)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2903888
252	27.6	5.8	4.6	chr4	80239443	80239594	(109974961)	+	MER112	DNA/hAT-Charlie	4	157	(104)	2904585
1451	29.4	12.2	1.1	chr4	80239660	80240268	(109974287)	+	L2a	LINE/L2	192	877	(2542)	2904586
16260	22.4	5.0	3.0	chr4	80623438	80627011	(109587544)	+	L1MA8	LINE/L1	466	5078	(2484)	2905045
9655	13.3	6.1	0.8	chr4	80905901	80907441	(109307114)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2905392
2453	13.4	0.5	0.0	chr4	80907444	80907816	(109306739)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2905392
2428	8.9	0.0	0.3	chr4	83117446	83117748	(107096807)	+	AluSx3	SINE/Alu	1	302	(9)	2908888
276	25.0	2.1	5.2	chr4	83117797	83117893	(107096662)	+	L1ME4c	LINE/L1	281	374	(456)	2908889
416	14.9	0.0	1.5	chr4	83117907	83117974	(107096581)	+	MER96	DNA/hAT-Tip100	109	175	(0)	2908890
1986	14.8	1.6	0.0	chr4	83118164	83118460	(107096095)	+	AluJb	SINE/Alu	9	310	(2)	2908891
2557	13.4	0.5	1.8	chr4	83621951	83622330	(106592225)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2909897
10378	11.4	4.1	1.0	chr4	83622331	83623860	(106590695)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2909897
2180	15.4	0.0	1.5	chr4	83959201	83959543	(106255012)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	2910485
285	28.4	2.5	4.9	chr4	84531574	84531695	(105682860)	+	L1MC4	LINE/L1	7922	8040	(2)	2911219
2097	15.0	3.0	2.5	chr4	87690783	87691144	(102523411)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2915932
10898	9.1	0.9	9.3	chr4	87691145	87691660	(102522895)	+	THE1B-int	LTR/ERVL-MaLR	1	381	(1199)	2915932
2207	12.9	4.2	0.8	chr4	88025671	88026038	(102188517)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2916407
11707	9.9	1.5	0.7	chr4	88026039	88027657	(102186898)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	2916407
10066	13.3	5.5	0.3	chr4	89444876	89446421	(100768134)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2918663
2191	14.5	9.4	1.5	chr4	89446424	89446815	(100767740)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	2918663
346	29.3	2.6	2.0	chr4	90313619	90313768	(99900787)	+	MER115	DNA/hAT-Tip100	306	456	(237)	2919788
9845	11.6	6.3	0.1	chr4	91820288	91821758	(98392797)	C	THE1A-int	LTR/ERVL-MaLR	(11)	1569	1	2921575
2304	10.2	0.3	2.1	chr4	91821819	91822158	(98392397)	C	THE1A	LTR/ERVL-MaLR	(20)	335	2	2921575
2109	12.4	4.9	3.1	chr4	96307341	96307697	(93906858)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2927509
10640	11.5	1.7	0.2	chr4	96307698	96309253	(93905302)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2927509
2228	16.5	3.7	1.2	chr4	97886729	97887145	(92327410)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2929456
9009	17.9	1.4	0.4	chr4	97887146	97888760	(92325795)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2929456
2121	12.0	5.8	2.6	chr4	98366102	98366453	(91848102)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2930057
11317	9.4	1.3	0.1	chr4	98366454	98368013	(91846542)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2930057
17	27.4	1.4	2.9	chr4	99946256	99946324	(90268231)	+	G-rich	Low_complexity	1	70	(0)	2932375
10272	11.8	3.5	0.4	chr4	100035462	100036991	(90177564)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2932504
2319	13.8	1.1	1.6	chr4	100036992	100037368	(90177187)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2932504
259	27.8	6.2	2.2	chr4	103358956	103359047	(86855508)	+	L1ME4b	LINE/L1	722	817	(75)	2936943
1821	15.8	14.2	1.9	chr4	103359052	103359419	(86855136)	+	MSTA	LTR/ERVL-MaLR	6	426	(2)	2936944
10477	14.4	1.1	0.1	chr4	103359422	103361036	(86853519)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2936944
1382	23.3	11.4	4.3	chr4	103683110	103683800	(86530755)	+	L1MD	LINE/L1	2889	3634	(2512)	2937330
40	10.1	5.1	2.4	chr4	103683815	103683892	(86530663)	+	GA-rich	Low_complexity	1	82	(0)	2937334
3608	26.2	4.9	2.6	chr4	103683987	103684718	(86529837)	+	L1MD	LINE/L1	3898	4658	(1488)	2937330
7137	17.8	3.1	0.0	chr4	103753746	103754948	(86459607)	+	HERVL18-int	LTR/ERVL	4806	6047	(0)	2937413
2136	14.2	2.5	0.0	chr4	103754950	103755259	(86459296)	+	LTR18A	LTR/ERVL	1	318	(39)	2937413
317	28.7	4.0	1.4	chr4	104775266	104775410	(85439145)	+	L4_A_Mam	LINE/RTE-X	3098	3246	(1744)	2938626
327	27.2	4.4	8.5	chr4	104775563	104775751	(85438804)	C	L1M5	LINE/L1	(1352)	4794	4614	2938627
7872	20.2	3.4	1.1	chr4	106089436	106091043	(84123512)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	5	2940369
2272	16.4	3.1	1.0	chr4	106091048	106091387	(84123168)	C	MSTB	LTR/ERVL-MaLR	(0)	426	78	2940369
12230	7.9	0.6	0.1	chr4	106091388	106092956	(84121599)	C	LTR12C	LTR/ERV1	(0)	1579	2	2940372
3650	13.4	4.8	0.7	chr4	107855177	107855853	(82358702)	C	L1M2	LINE/L1	(2959)	3184	2479	2942612
367	33.3	10.6	0.0	chr4	107855857	107856024	(82358531)	C	MIR	SINE/MIR	(74)	188	1	2942613
11694	9.7	1.9	0.1	chr4	109322672	109324271	(80890284)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	1	2944753
1985	12.9	6.6	1.9	chr4	109324272	109324634	(80889921)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2944753
1891	21.8	1.5	2.7	chr4	109675607	109676007	(80538548)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2945353
1294	17.1	4.3	0.4	chr4	109676010	109676256	(80538299)	+	MSTD-int	LTR/ERVL-MaLR	2	258	(1477)	2945353
1051	13.4	0.0	0.0	chr4	109676257	109676390	(80538165)	+	AluSz	SINE/Alu	1	134	(178)	2945354
11617	9.6	1.3	0.0	chr4	110217588	110219147	(79995408)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2946194
2696	9.1	0.3	0.3	chr4	110219148	110219500	(79995055)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	2946194
551	34.6	4.5	7.5	chr4	110392878	110393713	(79820842)	C	L2c	LINE/L2	(20)	3367	2556	2946542
4493	16.4	2.9	6.7	chr4	110393714	110394653	(79819902)	+	MER4D	LTR/ERV1	1	903	(0)	2946550
1173	18.6	1.8	0.5	chr4	112237916	112238136	(77976419)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	2948907
211	30.6	0.0	4.6	chr4	112238161	112238225	(77976330)	+	L2c	LINE/L2	3286	3347	(40)	2948908
188	37.6	4.1	0.0	chr4	113071439	113071531	(77143024)	+	L2c	LINE/L2	3047	3143	(244)	2950352
2517	11.0	0.8	1.9	chr4	113071755	113072133	(77142422)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2950353
2049	17.6	0.8	2.5	chr4	114182056	114182423	(76032132)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	2951772
11171	10.2	1.2	0.1	chr4	114182426	114183985	(76030570)	+	THE1B-int	LTR/ERVL-MaLR	3	1580	(0)	2951772
1940	27.2	6.6	3.4	chr4	115844419	115845045	(74369510)	C	MER76	LTR/ERVL	(42)	649	1	2953735
1220	12.4	0.0	2.7	chr4	115845120	115845305	(74369250)	C	AluSx	SINE/Alu	(3)	309	129	2953736
10431	12.9	2.0	0.2	chr4	115909694	115911295	(74303260)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2953813
1917	14.4	5.3	2.2	chr4	115911297	115911664	(74302891)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	2953813
2158	13.4	1.4	0.8	chr4	116097181	116097533	(74117022)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2954039
10956	11.5	0.6	0.1	chr4	116097534	116099104	(74115451)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2954039
5234	17.2	0.5	0.2	chr4	116359378	116360235	(73854320)	+	HERVL18-int	LTR/ERVL	2720	3579	(2468)	2954338
9672	17.6	2.3	0.7	chr4	116360238	116361865	(73852690)	+	HERVL18-int	LTR/ERVL	4394	6047	(0)	2954338
1972	15.3	2.2	4.6	chr4	117756717	117756898	(72457657)	+	THE1B	LTR/ERVL-MaLR	1	186	(178)	2956037
31	0.0	5.6	0.0	chr4	117756899	117756934	(72457621)	+	(TTTTAAA)n	Simple_repeat	1	38	(0)	2956038
1972	15.3	2.2	4.6	chr4	117756935	117757120	(72457435)	+	THE1B	LTR/ERVL-MaLR	187	360	(4)	2956037
11436	10.3	0.4	0.1	chr4	117757125	117758700	(72455855)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2956037
3530	26.4	3.1	3.7	chr4	117916058	117917161	(72297394)	C	L1PBa	LINE/L1	(5219)	1644	548	2956221
213	31.5	5.3	0.0	chr4	118586459	118586547	(71628008)	+	L2a	LINE/L2	3315	3408	(18)	2957155
337	22.0	9.1	0.0	chr4	118586548	118586671	(71627884)	C	MLT1H	LTR/ERVL-MaLR	(3)	546	345	2957156
3361	24.3	10.9	1.7	chr4	122722012	122723445	(67491110)	C	L1M5	LINE/L1	(1077)	5069	3442	2962911
11751	9.0	0.6	0.9	chr4	122880548	122881821	(67332734)	C	THE1B-int	LTR/ERVL-MaLR	(299)	1281	1	2963164
2235	11.0	5.0	3.6	chr4	122881822	122882178	(67332377)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	2963164
2398	8.4	0.3	3.0	chr4	123428884	123429181	(66785374)	+	AluSp	SINE/Alu	6	295	(18)	2963955
9503	16.1	1.6	0.4	chr4	123688654	123690265	(66524290)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2964384
2705	12.9	2.3	0.2	chr4	123690266	123690684	(66523871)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2964384
2411	33.2	13.8	4.6	chr4	125872014	125872293	(64342262)	+	L2	LINE/L2	1194	1513	(1906)	2967186
275	17.0	0.0	0.0	chr4	125872294	125872346	(64342209)	+	L1PREC2	LINE/L1	4634	4686	(1460)	2967188
2411	33.2	13.8	4.6	chr4	125872347	125873239	(64341316)	+	L2	LINE/L2	1514	2539	(880)	2967186
11461	9.7	0.5	0.5	chr4	126524035	126525614	(63688941)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2967911
2656	9.6	0.0	0.3	chr4	126525615	126525970	(63688585)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2967911
26380	6.2	0.4	0.3	chr4	128261920	128265255	(61949300)	+	Harlequin-int	LTR/ERV1	1584	4925	(1971)	2970458
460	32.7	14.0	1.1	chr4	130518601	130518947	(59695608)	+	L1M5	LINE/L1	3758	4156	(1990)	2973495
12	30.9	0.0	0.0	chr4	130518975	130519018	(59695537)	+	A-rich	Low_complexity	1	44	(0)	2973496
2123	15.4	3.6	1.4	chr4	131099788	131100143	(59114412)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2974213
10078	11.3	1.5	6.9	chr4	131100144	131101814	(59112741)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2974213
13317	19.6	2.3	3.8	chr4	132655205	132656591	(57557964)	C	L1MA4A	LINE/L1	(2568)	4277	3079	2976083
10960	11.2	1.0	0.0	chr4	133771090	133772652	(56441903)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2977346
1972	14.6	4.1	3.1	chr4	133772654	133773013	(56441542)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2977346
8980	15.1	6.5	3.8	chr4	133988178	133989762	(56224793)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	1	2977571
2131	15.4	3.2	1.4	chr4	133989763	133990130	(56224425)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2977571
1855	15.1	5.8	1.4	chr4	134731447	134731808	(55482747)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	2978479
9436	13.8	4.7	0.9	chr4	134731811	134733330	(55481225)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2978479
1634	16.4	7.5	0.7	chr4	135193627	135193979	(55020576)	+	MSTA	LTR/ERVL-MaLR	1	423	(9)	2978989
5640	18.8	7.3	0.9	chr4	135194021	135195151	(55019404)	+	MSTB-int	LTR/ERVL-MaLR	443	1651	(0)	2978990
1582	18.2	6.7	3.2	chr4	135710902	135711247	(54503308)	+	THE1D	LTR/ERVL-MaLR	23	381	(0)	2979588
5183	15.0	4.5	1.4	chr4	135711248	135712119	(54502436)	+	THE1D-int	LTR/ERVL-MaLR	1	901	(679)	2979588
1965	16.4	11.4	0.5	chr4	136453694	136454074	(53760481)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2980488
4977	18.4	10.4	1.8	chr4	136454075	136455164	(53759391)	+	MSTA-int	LTR/ERVL-MaLR	2	1195	(436)	2980488
9446	21.4	6.3	4.2	chr4	138125107	138125625	(52088930)	C	HERVL74-int	LTR/ERVL	(2356)	3329	2837	2982499
2585	15.0	1.6	0.7	chr4	138125626	138126047	(52088508)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2982500
7908	19.2	6.1	1.0	chr4	138126048	138127613	(52086942)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	2982500
11447	10.7	0.4	0.2	chr4	138373585	138375156	(51839399)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	1	2982823
1956	15.2	5.5	2.8	chr4	138375159	138375510	(51839045)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	2982823
3730	28.1	5.4	2.7	chr4	139143976	139145520	(51069035)	+	L1PBa	LINE/L1	3	1591	(5272)	2984019
4278	12.3	5.8	7.9	chr4	141782638	141783407	(48431148)	C	THE1C-int	LTR/ERVL-MaLR	(827)	753	1	2988131
2535	13.3	0.0	0.3	chr4	141783408	141783783	(48430772)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2988131
16	0.0	0.0	0.0	chr4	142178834	142178850	(48035705)	+	(A)n	Simple_repeat	1	17	(0)	2988604
2122	13.9	0.3	0.7	chr4	142179191	142179491	(48035064)	+	AluSx3	SINE/Alu	1	300	(11)	2988605
1328	27.9	6.2	3.5	chr4	143122163	143122597	(47091958)	+	LTR16A	LTR/ERVL	2	449	(2)	2989838
2971	30.1	6.3	6.1	chr4	143122629	143123248	(47091307)	+	ERV3-16A3_I-int	LTR/ERVL	3725	4371	(855)	2989839
2040	11.6	6.1	3.0	chr4	143830380	143830742	(46383813)	+	THE1D	LTR/ERVL-MaLR	1	375	(0)	2990808
10110	11.5	3.4	4.1	chr4	143830743	143832335	(46382220)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2990808
1917	15.1	6.0	3.8	chr4	143951439	143951810	(46262745)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2990973
10083	11.8	3.2	4.4	chr4	143951811	143953410	(46261145)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2990973
1920	14.5	6.4	1.5	chr4	144061399	144061737	(46152818)	+	THE1D	LTR/ERVL-MaLR	1	357	(24)	2991133
10074	11.6	3.2	4.2	chr4	144061738	144063334	(46151221)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2991133
10012	13.4	2.6	0.8	chr4	144441971	144443571	(45770984)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2991606
2013	14.6	11.5	0.8	chr4	144443574	144443953	(45770602)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	2991606
189	32.2	12.9	5.5	chr4	145560785	145560912	(44653643)	C	L2c	LINE/L2	(5)	3382	3244	2993099
382	28.3	8.2	11.7	chr4	145560896	145561023	(44653532)	C	MIRb	SINE/MIR	(3)	265	148	2993100
2333	9.6	0.3	0.0	chr4	145561034	145561347	(44653208)	C	AluSp	SINE/Alu	(0)	313	2	2993101
505	30.9	3.8	7.7	chr4	145789421	145789693	(44424862)	C	MIR	SINE/MIR	(0)	262	1	2993397
13	16.7	4.8	2.3	chr4	147802141	147802182	(42412373)	+	(CTTTTC)n	Simple_repeat	1	44	(0)	2996277
10977	10.5	2.6	0.1	chr4	148636755	148638295	(41576260)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2997382
2723	9.9	0.0	0.0	chr4	148638296	148638650	(41575905)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2997382
884	26.8	6.8	8.1	chr4	148959924	148960416	(41254139)	+	MLT1H	LTR/ERVL-MaLR	1	485	(4)	2997829
3081	24.7	11.5	4.1	chr4	148960421	148961729	(41252826)	+	MLT1H-int	LTR/ERVL-MaLR	1	1408	(1)	2997829
2266	10.4	7.2	1.5	chr4	151736679	151737019	(38477536)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3001914
8577	9.6	1.3	1.2	chr4	151737022	151738298	(38476257)	+	THE1B-int	LTR/ERVL-MaLR	1	1278	(302)	3001914
11772	9.9	1.0	0.1	chr4	152144908	152146471	(38068084)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	3002526
2788	9.1	0.0	0.0	chr4	152146473	152146825	(38067730)	C	THE1A	LTR/ERVL-MaLR	(0)	355	3	3002526
2497	15.4	2.6	4.3	chr4	152146826	152147062	(38067493)	+	MER39	LTR/ERV1	473	701	(6)	3002525
2760	7.6	0.3	0.0	chr4	152875758	152876111	(37338444)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3003696
11229	8.6	3.2	0.5	chr4	152876112	152877648	(37336907)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3003696
8295	17.1	6.4	1.0	chr4	153027824	153029383	(37185172)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	3003908
2317	16.1	4.5	0.5	chr4	153029385	153029790	(37184765)	C	MSTB	LTR/ERVL-MaLR	(1)	425	3	3003908
2515	10.6	4.4	2.0	chr4	153866585	153866939	(36347616)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3005277
10997	10.3	1.5	0.1	chr4	153866940	153868429	(36346126)	+	THE1B-int	LTR/ERVL-MaLR	1	1512	(68)	3005277
244	35.0	2.7	4.3	chr4	154308065	154308249	(35906306)	+	L2	LINE/L2	1908	2089	(1330)	3005837
21	15.9	0.0	0.0	chr4	154308254	154308288	(35906267)	+	A-rich	Low_complexity	1	35	(0)	3005838
13	31.0	2.4	4.7	chr4	154308289	154308337	(35906218)	+	GA-rich	Low_complexity	1	86	(0)	3005839
19	22.6	2.3	6.7	chr4	154308432	154308519	(35906036)	+	(TCAT)n	Simple_repeat	1	90	(0)	3005840
1863	11.5	11.6	0.3	chr4	158952242	158952556	(31261999)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3012146
11250	10.0	1.4	0.6	chr4	158952557	158954124	(31260431)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3012146
2452	11.8	2.5	0.0	chr4	162492194	162492548	(27722007)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3016810
9171	14.1	3.2	5.1	chr4	162492549	162494149	(27720406)	+	THE1B-int	LTR/ERVL-MaLR	1	1570	(10)	3016810
11033	11.3	0.9	0.5	chr4	163235035	163236606	(26977949)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3017760
2532	8.4	2.8	0.6	chr4	163236607	163236953	(26977602)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3017760
1062	20.2	3.3	0.0	chr4	163535844	163536051	(26678504)	+	MER20	DNA/hAT-Charlie	5	219	(0)	3018198
10768	12.5	0.5	0.2	chr4	166210982	166212556	(24001999)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	3022098
2687	8.8	0.3	0.0	chr4	166212560	166212911	(24001644)	C	THE1A	LTR/ERVL-MaLR	(2)	353	1	3022099
2176	11.6	5.0	5.5	chr4	167730098	167730316	(22484239)	+	THE1B	LTR/ERVL-MaLR	155	364	(0)	3023935
10727	10.5	1.8	0.2	chr4	167730318	167731871	(22482684)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	3023935
2816	6.5	0.3	0.3	chr4	168047496	168047850	(22166705)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3024306
11467	9.3	1.4	0.9	chr4	168047851	168048123	(22166432)	+	THE1A-int	LTR/ERVL-MaLR	1	274	(1306)	3024306
2269	10.4	0.3	0.3	chr4	168048124	168048421	(22166134)	C	AluY	SINE/Alu	(13)	298	1	3024307
284	34.9	5.2	0.0	chr4	169311575	169311703	(20902852)	C	L2b	LINE/L2	(11)	3364	3229	3026148
12	23.8	2.2	2.1	chr4	169312235	169312280	(20902275)	+	G-rich	Low_complexity	1	47	(0)	3026149
2512	10.5	0.3	0.0	chr4	169312314	169312619	(20901936)	+	AluSx1	SINE/Alu	1	307	(5)	3026150
2042	13.2	1.9	5.6	chr4	170213924	170214300	(20000255)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	3027475
10355	9.7	0.4	7.3	chr4	170214301	170215998	(19998557)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3027475
9970	12.1	3.5	0.7	chr4	170815393	170816927	(19397628)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3028214
9550	15.8	1.2	1.4	chr4	171069618	171071252	(19143303)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3028524
1589	17.7	15.0	1.1	chr4	171071255	171071620	(19142935)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	3028524
2558	12.1	0.3	0.3	chr4	172733476	172733839	(17480716)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3030660
3709	10.4	10.4	0.0	chr4	172733840	172734425	(17480130)	+	THE1B-int	LTR/ERVL-MaLR	1	654	(926)	3030660
1895	13.7	8.3	2.0	chr4	173660823	173661172	(16553383)	+	THE1D	LTR/ERVL-MaLR	8	381	(0)	3031908
11278	12.4	1.1	0.1	chr4	173661173	173662780	(16551775)	+	THE1D-int	LTR/ERVL-MaLR	1	1625	(6)	3031908
2136	12.2	5.2	2.5	chr4	173842514	173842867	(16371688)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3032163
11457	9.8	0.8	0.2	chr4	173842868	173844438	(16370117)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3032163
484	29.7	6.1	6.6	chr4	174107190	174107387	(16107168)	+	MamRep1879	DNA/hAT-Tip100?	1	197	(19)	3032527
326	34.5	10.6	7.4	chr4	174107520	174107910	(16106645)	C	L2b	LINE/L2	(5)	3370	2966	3032528
279	34.1	5.0	6.9	chr4	175807560	175807805	(14406750)	C	MLT1M	LTR/ERVL-MaLR	(408)	264	24	3034672
525	30.2	9.6	1.3	chr4	175807819	175808056	(14406499)	+	MIR	SINE/MIR	3	262	(0)	3034673
9923	14.5	2.0	0.2	chr4	175877730	175879328	(14335227)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	3034768
1795	16.2	6.1	1.4	chr4	175879331	175879687	(14334868)	C	THE1D	LTR/ERVL-MaLR	(0)	375	1	3034768
245	22.9	1.6	0.0	chr4	176591924	176591984	(13622571)	+	MLT1N2	LTR/ERVL-MaLR	501	562	(0)	3035740
8699	19.8	5.0	6.6	chr4	178240968	178243121	(11971434)	+	MER52D	LTR/ERV1	6	2123	(0)	3037938
1936	13.6	9.2	3.1	chr4	184276202	184276558	(5937997)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3046294
10100	11.3	5.6	0.7	chr4	184276559	184278059	(5936496)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3046294
919	29.6	11.8	1.7	chr4	184985588	184986006	(5228549)	+	L2a	LINE/L2	2938	3404	(22)	3047491
1613	23.9	5.9	0.5	chr4	188254262	188254693	(1959862)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	3	3052321
10194	15.2	0.9	0.7	chr4	189260071	189261699	(952856)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3053638
1730	16.5	11.7	0.8	chr4	189261701	189262067	(952488)	C	MSTA	LTR/ERVL-MaLR	(16)	412	1	3053638
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
23124	11.8	1.4	0.0	chr4	190108264	190111540	(103015)	C	HERVK-int	LTR/ERVK	(1208)	6328	3007	3054628
261	23.3	0.0	0.0	chr4	190111624	190111683	(102872)	C	HERVK-int	LTR/ERVK	(6716)	718	659	3054629
1729	17.1	1.4	0.3	chr4	190111667	190111959	(102596)	C	HERVK-int	LTR/ERVK	(6840)	696	401	3054629
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
254	28.9	3.3	0.4	chr5	1960429	1961298	(179576961)	+	(CA)n	Simple_repeat	1	899	(0)	3056820
2391	12.6	3.6	2.2	chr5	2400630	2400987	(179137272)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	3057247
11395	9.5	1.8	1.1	chr5	2400989	2401225	(179137034)	+	THE1B-int	LTR/ERVL-MaLR	1	240	(1340)	3057247
1333	26.6	2.2	5.7	chr5	2676526	2677000	(178861259)	+	MLT1E2	LTR/ERVL-MaLR	1	458	(169)	3057540
554	30.8	10.2	6.1	chr5	2677087	2677463	(178860796)	+	MLT1E2-int	LTR/ERVL-MaLR	3	396	(991)	3057540
11450	10.5	0.3	0.5	chr5	4394383	4395965	(177142294)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3059344
2021	13.4	5.0	2.8	chr5	4395966	4396318	(177141941)	C	THE1B	LTR/ERVL-MaLR	(0)	364	4	3059344
11913	10.7	0.8	0.1	chr5	4655221	4656790	(176881469)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3059639
2155	13.3	1.2	2.6	chr5	4656791	4657137	(176881122)	C	THE1A	LTR/ERVL-MaLR	(0)	355	14	3059639
239	32.6	4.0	5.0	chr5	6246344	6246543	(175291716)	+	L3	LINE/CR1	3815	4012	(87)	3061576
1664	18.9	11.0	5.9	chr5	8004033	8004436	(173533823)	+	MSTC	LTR/ERVL-MaLR	2	428	(0)	3063841
3730	27.8	10.3	12.3	chr5	8004439	8004896	(173533363)	+	MSTC-int	LTR/ERVL-MaLR	2	423	(1312)	3063841
2183	12.6	0.7	0.0	chr5	10197597	10197898	(171340361)	+	AluSx	SINE/Alu	7	310	(2)	3066479
2291	30.2	10.7	3.0	chr5	10197899	10198242	(171340017)	C	MLT1B-int	LTR/ERVL-MaLR	(1002)	385	4	3066477
841	26.4	14.4	7.0	chr5	10198250	10198619	(171339640)	C	MLT1B	LTR/ERVL-MaLR	(8)	403	2	3066477
2292	11.7	0.0	0.0	chr5	11828248	11828554	(169709705)	+	AluSq	SINE/Alu	1	307	(6)	3068812
2064	13.5	4.7	4.7	chr5	11828555	11828747	(169709512)	+	THE1B	LTR/ERVL-MaLR	186	364	(0)	3068811
11139	10.3	1.3	0.4	chr5	11828748	11830312	(169707947)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3068811
3396	12.9	5.9	7.4	chr5	13997125	13997762	(167540497)	C	MLT1A1-int	LTR/ERVL-MaLR	(1107)	628	1	3071588
1788	17.0	10.1	5.0	chr5	13997763	13997847	(167540412)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	341	3071588
2367	10.1	0.0	0.0	chr5	13997848	13998143	(167540116)	C	AluSx	SINE/Alu	(16)	296	1	3071589
10931	10.3	1.3	4.6	chr5	14604399	14606033	(166932226)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3072408
2159	12.2	5.2	4.4	chr5	14606034	14606394	(166931865)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3072408
12	14.8	0.0	5.9	chr5	14742222	14742255	(166796004)	+	(CCTGCT)n	Simple_repeat	1	34	(0)	3072599
8243	14.3	10.2	0.8	chr5	15583316	15584746	(165953513)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	3073762
996	13.0	7.7	0.5	chr5	15584747	15584940	(165953319)	C	THE1D	LTR/ERVL-MaLR	(0)	381	173	3073762
24	13.7	2.1	0.0	chr5	15585037	15585084	(165953175)	+	(ATAATTT)n	Simple_repeat	1	49	(0)	3073763
2151	9.6	4.6	0.3	chr5	17126256	17126546	(164411713)	C	AluSg	SINE/Alu	(6)	304	1	3076274
1098	19.1	4.8	0.8	chr5	17126736	17126973	(164411286)	+	L1ME2	LINE/L1	5910	6157	(7)	3076275
11111	11.0	0.3	0.3	chr5	18615836	18617413	(162920846)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	3	3078302
2087	12.9	2.5	2.7	chr5	18617416	18617780	(162920479)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3078302
2033	14.8	3.9	2.8	chr5	18855111	18855470	(162682789)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3078604
5684	13.6	15.4	6.1	chr5	18855471	18855948	(162682311)	+	THE1B-int	LTR/ERVL-MaLR	1	414	(1166)	3078604
14236	21.5	4.2	7.2	chr5	22037692	22042610	(159495649)	+	L1MA6	LINE/L1	399	4874	(2688)	3082880
419	31.8	4.3	5.2	chr5	22415340	22415606	(159122653)	+	MLT1H2	LTR/ERVL-MaLR	1	265	(224)	3083384
376	23.9	4.9	4.1	chr5	22415766	22415887	(159122372)	+	MLT1H-int	LTR/ERVL-MaLR	2	124	(1285)	3083385
534	29.3	0.9	5.1	chr5	22415930	22416060	(159122199)	+	MLT1H-int	LTR/ERVL-MaLR	125	256	(1153)	3083385
2129	13.4	7.5	1.5	chr5	22674170	22674509	(158863750)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3083750
6934	9.2	0.3	0.8	chr5	22674510	22675463	(158862796)	+	THE1B-int	LTR/ERVL-MaLR	1	949	(631)	3083750
10749	11.6	0.7	0.4	chr5	23942392	23943966	(157594293)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3085437
2493	12.7	0.0	0.3	chr5	23943967	23944322	(157593937)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3085437
1920	17.3	1.1	3.5	chr5	25529318	25529688	(156008571)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3087438
10384	12.2	1.6	0.3	chr5	25529689	25531247	(156007012)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3087438
5182	9.0	2.6	0.7	chr5	25575356	25576106	(155962153)	+	MER4E	LTR/ERV1	1	766	(0)	3087483
2161	16.0	1.9	0.5	chr5	26409644	26410013	(155128246)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3088534
9411	14.4	6.4	0.2	chr5	26410016	26411543	(155126716)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3088534
1873	17.9	3.9	0.9	chr5	26707138	26707486	(154830773)	+	THE1B	LTR/ERVL-MaLR	3	362	(2)	3088879
7653	12.8	1.6	0.0	chr5	26707489	26708621	(154829638)	+	THE1B-int	LTR/ERVL-MaLR	1	1152	(428)	3088879
6562	22.0	4.5	1.0	chr5	26855103	26856465	(154681794)	C	MSTB-int	LTR/ERVL-MaLR	(234)	1417	6	3089084
1838	23.8	2.1	0.5	chr5	26856477	26856894	(154681365)	C	MSTB	LTR/ERVL-MaLR	(0)	426	2	3089084
2525	11.8	3.4	0.2	chr5	27204554	27204951	(154333308)	C	THE1D-int	LTR/ERVL-MaLR	(1218)	413	3	3089574
1730	20.3	5.8	0.8	chr5	27204954	27205315	(154332944)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3089574
11793	17.6	3.2	3.9	chr5	27746744	27748590	(153789669)	+	L1PA17	LINE/L1	3541	5357	(1492)	3090287
2275	15.7	0.0	2.9	chr5	27748591	27748965	(153789294)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3090289
1581	15.7	4.0	5.7	chr5	34182319	34182469	(147355790)	+	AluJo	SINE/Alu	126	275	(37)	3099474
53	0.0	2.0	0.0	chr5	34182475	34182525	(147355734)	+	(AAAT)n	Simple_repeat	1	52	(0)	3099476
10185	12.2	3.1	0.5	chr5	34310046	34311583	(147226676)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3099631
2046	14.6	3.5	2.2	chr5	34311584	34311953	(147226306)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3099631
10643	11.9	4.0	3.7	chr5	35252230	35253805	(146284454)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3101158
2699	11.9	0.8	0.3	chr5	35253806	35254167	(146284092)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3101158
2268	14.2	4.2	5.4	chr5	36012392	36012777	(145525482)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3102180
9698	15.4	6.4	0.5	chr5	36012780	36014312	(145523947)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3102181
2165	11.2	0.3	0.0	chr5	37367794	37368080	(144170179)	C	AluSg	SINE/Alu	(22)	288	1	3104371
1502	17.3	3.3	5.1	chr5	37368081	37368209	(144170050)	C	AluJb	SINE/Alu	(186)	126	1	3104368
1559	16.3	0.0	4.8	chr5	37368210	37368507	(144169752)	C	AluJb	SINE/Alu	(0)	312	26	3104372
3975	13.1	2.3	2.5	chr5	38660105	38660746	(142877513)	+	LTR9D	LTR/ERV1	5	645	(0)	3106453
412	23.9	1.8	1.8	chr5	38743775	38743885	(142794374)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	500	3106584
2419	8.5	7.0	0.0	chr5	40881494	40881823	(140656436)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3109618
11696	9.8	0.9	0.1	chr5	40881824	40883389	(140654870)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3109618
8076	18.0	3.6	7.1	chr5	41976226	41977659	(139560600)	C	MSTB-int	LTR/ERVL-MaLR	(5)	1646	200	3111074
634	12.7	0.0	0.0	chr5	41977660	41977738	(139560521)	C	AluSx	SINE/Alu	(233)	79	1	3111075
8076	18.0	3.6	7.1	chr5	41977739	41977934	(139560325)	C	MSTB-int	LTR/ERVL-MaLR	(5)	199	1	3111074
2223	20.3	0.5	2.1	chr5	41977935	41978367	(139559892)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3111074
10094	12.7	3.2	0.3	chr5	44596662	44598195	(136940064)	C	THE1C-int	LTR/ERVL-MaLR	(1)	1579	1	3114457
2627	9.9	0.8	1.1	chr5	44598196	44598571	(136939688)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3114457
1889	15.5	4.1	4.6	chr5	51871945	51872310	(129665949)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3118277
10737	11.7	1.3	0.1	chr5	51872311	51873871	(129664388)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3118277
270	31.8	1.1	0.0	chr5	52657450	52657537	(128880722)	C	MIRb	SINE/MIR	(3)	265	177	3119245
311	29.9	12.1	2.9	chr5	60833172	60833343	(120704916)	+	MIR3	SINE/MIR	16	205	(3)	3131394
549	21.5	2.0	5.1	chr5	60833412	60833568	(120704691)	+	LTR16C	LTR/ERVL	290	441	(48)	3131395
817	27.7	5.5	1.2	chr5	60833628	60833872	(120704387)	+	MIRb	SINE/MIR	13	268	(0)	3131396
32	24.3	0.0	0.0	chr5	62151247	62151316	(119386943)	+	(GT)n	Simple_repeat	1	70	(0)	3133270
544	25.7	10.3	2.5	chr5	62686554	62686835	(118851424)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	196	3134219
317	16.0	0.0	0.0	chr5	62686923	62686972	(118851287)	C	MLT2C1	LTR/ERVL	(0)	563	514	3134220
22	21.1	0.0	6.7	chr5	62686974	62687048	(118851211)	+	(CTATAT)n	Simple_repeat	1	75	(0)	3134221
10691	11.5	1.3	0.4	chr5	62963716	62965280	(118572979)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3134576
2144	12.4	4.9	3.1	chr5	62965281	62965637	(118572622)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3134576
11170	11.1	1.1	0.1	chr5	62993484	62995047	(118543212)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3134609
2490	11.9	0.8	0.8	chr5	62995048	62995411	(118542848)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3134609
1666	27.1	13.9	4.4	chr5	65985625	65986352	(115551907)	+	L2	LINE/L2	1731	2538	(881)	3138790
2035	12.6	1.7	0.9	chr5	67895736	67896079	(113642180)	C	THE1C	LTR/ERVL-MaLR	(28)	347	1	3141370
502	10.4	5.0	0.0	chr5	67896080	67896175	(113642084)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	1531	3141370
821	12.8	1.5	0.0	chr5	67896161	67896293	(113641966)	C	THE1C-int	LTR/ERVL-MaLR	(1494)	137	3	3141370
2201	13.6	2.1	1.9	chr5	67896296	67896669	(113641590)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3141370
17	0.0	0.0	0.0	chr5	69517296	69517314	(112020945)	+	(AT)n	Simple_repeat	1	19	(0)	3144226
2090	10.8	0.0	0.7	chr5	69517315	69517592	(112020667)	C	AluSz	SINE/Alu	(16)	296	21	3144227
632	28.3	12.7	2.8	chr5	74099509	74099868	(107438391)	C	MLT1J2	LTR/ERVL-MaLR	(25)	423	23	3151496
5163	8.5	3.7	0.4	chr5	74106107	74106874	(107431385)	C	L1PA10	LINE/L1	(16)	6152	5359	3151512
14041	16.7	4.5	2.7	chr5	75121196	75124989	(106413270)	+	L1PB4	LINE/L1	3020	7003	(2)	3153093
272	26.0	13.3	0.2	chr5	75124997	75125162	(106413097)	+	MIRb	SINE/MIR	36	267	(1)	3153095
20	10.8	0.0	0.0	chr5	77868038	77868067	(103670192)	+	(TG)n	Simple_repeat	1	30	(0)	3157296
11506	9.3	0.8	0.4	chr5	80848811	80850385	(100687874)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3162301
2265	12.9	1.9	2.5	chr5	80850386	80850751	(100687508)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3162301
3037	20.9	4.9	2.8	chr5	82618574	82619312	(98918947)	C	MLT1A1-int	LTR/ERVL-MaLR	(980)	755	1	3164870
1300	21.8	13.5	0.8	chr5	82619313	82619668	(98918591)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3164870
1954	19.4	2.2	0.0	chr5	83610946	83611300	(97926959)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	3166179
8092	22.1	3.2	2.9	chr5	83611309	83613030	(97925229)	+	MLT1A0-int	LTR/ERVL-MaLR	7	1735	(0)	3166179
22291	10.5	1.9	0.9	chr5	87472336	87478717	(94059542)	+	L1PA8	LINE/L1	8	6487	(0)	3171170
725	14.9	1.7	0.0	chr5	90995450	90995563	(90542696)	+	MSTA	LTR/ERVL-MaLR	313	428	(0)	3175487
10952	12.2	1.5	0.3	chr5	90995564	90997172	(90541087)	+	MSTA-int	LTR/ERVL-MaLR	1	1629	(2)	3175487
6923	17.8	18.5	0.1	chr5	91142836	91144268	(90393991)	C	MER52A	LTR/ERV1	(0)	1755	1	3175697
10146	10.9	3.8	4.1	chr5	91564655	91566239	(89972020)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3176451
2207	13.3	2.8	0.6	chr5	91566240	91566595	(89971664)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3176451
2063	15.4	2.6	0.8	chr5	92011028	92011401	(89526858)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3177006
9836	12.7	3.5	1.7	chr5	92011402	92012952	(89525307)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3177006
1165	25.0	13.2	1.0	chr5	92472942	92473341	(89064918)	+	MSTA1	LTR/ERVL-MaLR	2	457	(0)	3177511
5233	25.6	5.9	4.7	chr5	92473342	92474841	(89063418)	+	MSTA1-int	LTR/ERVL-MaLR	1	1486	(165)	3177511
360	31.7	0.0	0.9	chr5	92492460	92492564	(89045695)	C	Eulor9C	DNA	(157)	113	10	3177532
11494	10.7	0.3	0.0	chr5	97342130	97343704	(84194555)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3183841
2057	14.5	7.1	1.7	chr5	97343705	97344048	(84194211)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3183841
1994	9.8	6.3	1.8	chr5	98382838	98383171	(83155088)	C	L1M1	LINE/L1	(4981)	2584	2235	3185064
1114	21.6	3.5	1.6	chr5	98383161	98383414	(83154845)	C	L1M1	LINE/L1	(7294)	271	13	3185064
19896	17.0	2.3	1.5	chr5	98383413	98387513	(83150746)	C	L1M1	LINE/L1	(3313)	4252	118	3185063
13149	15.2	6.9	3.4	chr5	98805196	98805559	(82732700)	+	L1MA5A	LINE/L1	2487	2846	(3297)	3185567
1641	15.9	8.7	1.4	chr5	98805560	98805848	(82732411)	+	AluJr4	SINE/Alu	1	312	(0)	3185568
1993	17.0	10.8	0.5	chr5	100240498	100240881	(81297378)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3187473
2766	8.6	0.5	0.5	chr5	100240882	100241268	(81296991)	+	MSTA-int	LTR/ERVL-MaLR	1	387	(1244)	3187473
375	14.3	2.5	1.3	chr5	100241269	100241346	(81296913)	+	MSTA-int	LTR/ERVL-MaLR	1553	1631	(0)	3187473
11020	10.4	1.3	0.3	chr5	102362700	102364263	(79173996)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3190029
2218	12.3	1.7	0.8	chr5	102364264	102364615	(79173644)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3190029
9500	13.6	3.5	1.6	chr5	104094881	104096387	(77441872)	C	THE1D-int	LTR/ERVL-MaLR	(27)	1553	3	3192298
1737	15.7	9.7	0.9	chr5	104096390	104096736	(77441523)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3192298
8798	22.1	4.5	4.9	chr5	104466981	104468897	(77069362)	C	L1M4b	LINE/L1	(704)	6334	4311	3192723
283	18.6	5.4	1.4	chr5	104468898	104468968	(77069291)	C	THE1B-int	LTR/ERVL-MaLR	(1506)	74	1	3192724
2355	13.7	1.6	0.6	chr5	104468969	104469328	(77068931)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3192724
8798	22.8	4.8	5.5	chr5	104469329	104469974	(77068285)	C	L1M4b	LINE/L1	(2696)	4310	3716	3192723
2381	9.3	3.1	0.0	chr5	104784959	104785301	(76752958)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	3193084
10818	11.7	1.1	0.1	chr5	104785303	104786865	(76751394)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3193084
10413	12.6	2.6	0.4	chr5	105460261	105461856	(76076403)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3193898
1444	18.3	19.4	1.1	chr5	105461857	105462205	(76076054)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3193898
3911	23.9	10.3	8.3	chr5	106208400	106209120	(75329139)	C	MLT1A0-int	LTR/ERVL-MaLR	(1066)	669	2	3194816
1590	19.6	8.0	0.6	chr5	106209126	106209459	(75328800)	C	MLT1A0	LTR/ERVL-MaLR	(4)	361	1	3194816
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
13	14.1	0.0	5.7	chr5	107672698	107672732	(73865527)	+	(CCCCTC)n	Simple_repeat	1	35	(0)	3196634
925	20.9	5.2	2.9	chr5	108303650	108303856	(73234403)	+	Charlie1	DNA/hAT-Charlie	7	218	(2563)	3197458
412	24.8	3.5	0.0	chr5	108303850	108303986	(73234273)	+	Charlie1b	DNA/hAT-Charlie	382	523	(0)	3197459
288	26.8	4.7	0.0	chr5	108304187	108304268	(73233991)	+	Tigger16a	DNA/TcMar-Tigger	605	690	(267)	3197460
1863	13.9	3.3	4.9	chr5	109640147	109640516	(71897743)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3199256
11463	9.4	1.5	0.0	chr5	109640517	109642072	(71896187)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3199256
966	20.2	2.2	0.6	chr5	112747931	112748109	(68790150)	+	MER58A	DNA/hAT-Charlie	43	224	(0)	3203223
13	24.7	0.0	0.0	chr5	112748281	112748318	(68789941)	+	GA-rich	Low_complexity	1	38	(0)	3203224
1687	12.0	6.2	0.4	chr5	113490209	113490483	(68047776)	+	MSTC	LTR/ERVL-MaLR	136	427	(1)	3204368
5354	26.1	8.5	4.0	chr5	113490486	113491838	(68046421)	+	MSTC-int	LTR/ERVL-MaLR	1	1363	(372)	3204368
2192	14.0	2.2	4.6	chr5	113766618	113766990	(67771269)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3204735
12000	9.5	1.8	0.6	chr5	113766991	113768551	(67769708)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3204735
2136	21.7	4.0	0.0	chr5	113881181	113881664	(67656595)	C	L1MB3	LINE/L1	(3091)	3291	2788	3204868
2024	13.6	3.7	9.2	chr5	113881665	113882068	(67656191)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3204870
1418	7.1	1.0	0.5	chr5	113882071	113882268	(67655991)	+	THE1D-int	LTR/ERVL-MaLR	3	201	(1430)	3204870
1056	21.6	1.7	4.1	chr5	113882269	113882340	(67655919)	C	L1MB3	LINE/L1	(3750)	2632	2561	3204868
10702	12.9	1.6	0.6	chr5	114824610	114826221	(66712038)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3206010
2265	14.8	1.1	0.8	chr5	114826224	114826597	(66711662)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3206010
16	11.1	0.0	0.0	chr5	116085200	116085228	(65453031)	+	(GGTGG)n	Simple_repeat	1	29	(0)	3207708
563	28.1	9.9	2.6	chr5	116085485	116085794	(65452465)	+	MER113	DNA/hAT-Charlie	152	486	(35)	3207709
11597	8.6	1.3	0.4	chr5	118702532	118704097	(62834162)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3211162
1799	15.4	3.1	4.4	chr5	118704098	118704457	(62833802)	C	THE1B	LTR/ERVL-MaLR	(0)	355	1	3211162
6189	17.8	5.8	2.2	chr5	118967082	118968363	(62569896)	+	L1MC4a	LINE/L1	6401	7731	(151)	3211576
7754	19.4	4.0	10.4	chr5	119086359	119087796	(62450463)	C	L1M3f	LINE/L1	(2306)	5253	3918	3211817
2332	10.5	0.0	0.0	chr5	119087797	119088100	(62450159)	C	AluSx1	SINE/Alu	(7)	305	2	3211822
1992	11.7	7.6	0.8	chr5	119135526	119135880	(62402379)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3211902
10996	11.4	1.6	0.9	chr5	119135881	119137493	(62400766)	+	THE1D-int	LTR/ERVL-MaLR	1	1625	(6)	3211902
749	28.1	13.3	11.1	chr5	119321225	119322329	(62215930)	+	L2a	LINE/L2	2224	3425	(1)	3212167
1610	14.4	7.1	3.3	chr5	119726349	119726714	(61811545)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3212678
10763	12.7	1.3	0.1	chr5	119726715	119728326	(61809933)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3212678
1368	29.5	3.5	1.3	chr5	119877268	119877852	(61660407)	C	L1M3de	LINE/L1	(5017)	1636	763	3212860
1768	17.6	1.3	0.7	chr5	119877868	119878173	(61660086)	C	AluJr	SINE/Alu	(3)	309	2	3212861
1866	19.8	1.5	4.2	chr5	120191682	120192086	(61346173)	+	MLT2C1	LTR/ERVL	3	396	(1)	3213216
1191	18.6	8.6	1.2	chr5	120192088	120192517	(61345742)	+	MLT1C	LTR/ERVL-MaLR	1	462	(5)	3213217
2225	17.6	6.8	5.9	chr5	121691461	121691967	(59846292)	C	MER67D	LTR/ERV1	(0)	514	3	3215013
1566	11.0	0.5	0.5	chr5	122933843	122934051	(58604208)	C	AluSx	SINE/Alu	(72)	240	32	3216700
414	14.4	4.2	9.1	chr5	122934054	122934152	(58604107)	+	L2a	LINE/L2	3332	3425	(1)	3216701
2196	12.9	0.0	0.0	chr5	122934364	122934657	(58603602)	C	AluSg	SINE/Alu	(16)	294	1	3216702
2052	20.7	9.3	9.0	chr5	123978882	123979439	(57558820)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3218080
5227	23.4	6.2	1.8	chr5	123979440	123980860	(57557399)	+	MLT1F2-int	LTR/ERVL-MaLR	1	1489	(0)	3218080
11509	10.1	0.5	0.0	chr5	125252914	125254485	(56283774)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3219813
1929	15.1	3.6	3.0	chr5	125254486	125254847	(56283412)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3219813
455	32.0	6.5	4.2	chr5	125484091	125484331	(56053928)	C	MIRb	SINE/MIR	(8)	260	14	3220105
500	26.3	1.2	1.8	chr5	126111823	126111992	(55426267)	C	L1ME2z	LINE/L1	(323)	6121	5953	3220793
2377	9.4	0.8	7.2	chr5	126112000	126112376	(55425883)	+	THE1A	LTR/ERVL-MaLR	2	354	(1)	3220794
11203	11.0	0.4	0.2	chr5	126112378	126113954	(55424305)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3220794
9736	12.3	3.9	1.2	chr5	130012784	130014320	(51523939)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3226022
2040	14.5	4.5	2.2	chr5	130014321	130014686	(51523573)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3226022
11336	10.8	0.5	0.0	chr5	130451420	130452991	(51085268)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3226590
2530	9.5	0.8	0.0	chr5	130452992	130453338	(51084921)	C	THE1A	LTR/ERVL-MaLR	(0)	355	6	3226590
933	11.8	0.0	2.2	chr5	133999030	133999164	(47539095)	+	FLAM_C	SINE/Alu	2	133	(10)	3231719
187	22.5	11.2	1.4	chr5	133999322	133999393	(47538866)	+	MIR	SINE/MIR	171	250	(12)	3231720
1046	22.1	8.4	3.0	chr5	133999419	133999688	(47538571)	+	LTR33	LTR/ERVL	5	290	(225)	3231721
235	31.9	11.3	0.7	chr5	134737607	134737748	(46800511)	C	L2a	LINE/L2	(166)	3260	3102	3233227
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
10403	10.5	7.4	0.8	chr5	135523002	135524522	(46013737)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3234418
2245	15.1	1.3	1.3	chr5	135524525	135524899	(46013360)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3234419
214	19.1	0.0	0.0	chr5	138581364	138581405	(42956854)	C	MIR	SINE/MIR	(140)	122	81	3239145
517	27.9	11.0	6.7	chr5	139004124	139004179	(42534080)	C	L1MEd	LINE/L1	(4824)	1401	1351	3239950
861	14.1	2.4	0.0	chr5	139004180	139004300	(42533959)	C	AluJr	SINE/Alu	(188)	124	1	3239951
16	5.3	0.0	0.0	chr5	139693532	139693551	(41844708)	+	(AC)n	Simple_repeat	1	20	(0)	3241317
291	32.1	0.9	2.8	chr5	139693646	139693754	(41844505)	+	MIR3	SINE/MIR	45	151	(57)	3241318
227	29.6	1.0	12.5	chr5	139693794	139693905	(41844354)	C	MIRb	SINE/MIR	(53)	215	117	3241319
2830	8.4	0.0	0.0	chr5	139718223	139718577	(41819682)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3241372
12474	7.4	0.7	1.8	chr5	139718578	139718847	(41819412)	+	THE1A-int	LTR/ERVL-MaLR	1	272	(1308)	3241372
2373	11.9	0.0	0.0	chr5	139718848	139719158	(41819101)	C	AluSx1	SINE/Alu	(0)	312	2	3241373
263	28.6	10.8	0.0	chr5	140424840	140424930	(41113329)	+	MIRb	SINE/MIR	14	115	(153)	3242610
31	0.0	0.0	0.0	chr5	143615793	143615821	(37922438)	+	(T)n	Simple_repeat	1	29	(0)	3247978
1490	20.6	5.6	4.0	chr5	143615822	143615937	(37922322)	C	AluJb	SINE/Alu	(193)	119	1	3247977
294	34.7	8.7	0.9	chr5	143615938	143616135	(37922124)	+	L2a	LINE/L2	3211	3425	(1)	3247976
8598	14.4	3.6	4.9	chr5	145411425	145412719	(36125540)	C	THE1D-int	LTR/ERVL-MaLR	(305)	1275	1	3250661
1984	14.8	6.3	1.4	chr5	145412720	145413081	(36125178)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3250661
5226	15.3	1.4	0.1	chr5	145766974	145767767	(35770492)	+	LTR1E	LTR/ERV1	1	804	(0)	3251244
12	20.8	0.0	2.9	chr5	145926102	145926136	(35612123)	+	GA-rich	Low_complexity	1	35	(0)	3251538
2744	7.6	0.3	0.6	chr5	146728574	146728929	(34809330)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3253061
11637	9.0	1.8	0.2	chr5	146728930	146730483	(34807776)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3253061
4005	21.2	4.0	7.1	chr5	147204670	147205024	(34333235)	C	MSTD-int	LTR/ERVL-MaLR	(1392)	343	1	3253875
1181	21.2	17.9	0.3	chr5	147205025	147205350	(34332909)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3253875
728	22.7	8.7	15.4	chr5	148054612	148055005	(33483254)	+	MER67A	LTR/ERV1	1	359	(155)	3255302
2207	11.9	3.3	1.9	chr5	148055006	148055364	(33482895)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3255303
10601	11.8	2.7	0.2	chr5	148055365	148056904	(33481355)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3255303
240	25.6	3.2	11.8	chr5	148384292	148384393	(33153866)	+	MIR3	SINE/MIR	110	202	(6)	3255800
2313	13.6	2.8	1.4	chr5	148529274	148529632	(33008627)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3256025
11036	10.9	1.5	2.3	chr5	148529633	148531225	(33007034)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3256025
813	26.5	3.0	1.7	chr5	148941537	148941770	(32596489)	+	L1ME3G	LINE/L1	201	437	(487)	3256729
936	22.6	7.3	1.9	chr5	148941778	148942207	(32596052)	+	LTR33A	LTR/ERVL	13	518	(2)	3256730
199	18.2	2.2	0.0	chr5	148953095	148953138	(32585121)	+	MIR3	SINE/MIR	150	194	(14)	3256745
198	30.5	7.8	2.1	chr5	148953315	148953411	(32584848)	+	MIRc	SINE/MIR	52	154	(114)	3256746
537	27.3	15.4	0.5	chr5	148953614	148953823	(32584436)	C	MIRb	SINE/MIR	(6)	256	10	3256747
19	19.9	3.9	0.0	chr5	149731600	149731651	(31806608)	+	G-rich	Low_complexity	1	54	(0)	3258411
216	30.7	2.6	3.4	chr5	150499015	150499132	(31039127)	+	L2c	LINE/L2	3099	3215	(160)	3260106
584	27.1	18.6	2.9	chr5	150499141	150499414	(31038845)	+	MER102a	DNA/hAT-Charlie	1	327	(3)	3260107
1073	25.8	13.9	1.2	chr5	153005555	153005899	(28532360)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3264554
3666	24.8	4.4	4.4	chr5	153005900	153006875	(28531384)	+	MSTD-int	LTR/ERVL-MaLR	1	976	(759)	3264554
11841	9.6	3.2	0.3	chr5	153933830	153935363	(27602896)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3266130
2840	8.8	1.1	0.0	chr5	153935364	153935714	(27602545)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3266130
1384	11.7	0.5	0.0	chr5	153935725	153935920	(27602339)	C	MLT2B4	LTR/ERVL	(357)	199	3	3266131
2319	9.1	2.2	0.7	chr5	154664591	154664897	(26873362)	C	AluSx	SINE/Alu	(0)	312	1	3267718
8453	16.5	7.4	2.9	chr5	154664898	154665111	(26873148)	C	MSTB-int	LTR/ERVL-MaLR	(1411)	240	1	3267712
1302	11.4	0.0	0.0	chr5	154665117	154665322	(26872937)	C	AluSp	SINE/Alu	(0)	313	137	3267719
2442	15.4	7.3	0.0	chr5	154665340	154665734	(26872525)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3267720
716	22.5	12.5	2.8	chr5	154686481	154686710	(26851549)	+	MER102c	DNA/hAT-Charlie	70	301	(30)	3267784
2150	11.4	5.5	1.6	chr5	158034405	158034770	(23503489)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3273891
11180	11.1	2.4	0.2	chr5	158034772	158036321	(23501938)	+	THE1D-int	LTR/ERVL-MaLR	2	1586	(45)	3273891
12393	10.1	0.8	0.0	chr5	159297713	159299280	(22238979)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3275856
2284	13.6	2.8	1.9	chr5	159299281	159299641	(22238618)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3275856
1971	14.3	13.1	1.6	chr5	164104168	164104543	(17433716)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	3283558
11131	12.8	0.4	1.0	chr5	164104546	164106186	(17432073)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3283558
11347	10.2	1.0	0.2	chr5	164126193	164127757	(17410502)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	3	3283586
1796	16.8	2.5	4.4	chr5	164127760	164128121	(17410138)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3283586
1973	14.4	0.0	16.1	chr5	165527287	165527733	(16010526)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3285453
9300	13.1	5.1	3.9	chr5	165527734	165529294	(16008965)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3285453
242	32.2	3.3	1.1	chr5	167030961	167031048	(14507211)	C	MER5A	DNA/hAT-Charlie	(22)	167	78	3287717
196	29.0	4.6	3.1	chr5	168748906	168748969	(12789290)	C	OldhAT1	DNA/hAT-Ac	(689)	2159	2095	3290693
530	35.7	5.2	10.2	chr5	171829318	171829903	(9708356)	+	MLT1N2	LTR/ERVL-MaLR	5	559	(3)	3296123
914	30.8	8.4	11.9	chr5	171829997	171830839	(9707420)	+	MLT1N2-int	LTR/ERVL-MaLR	110	920	(467)	3296123
102	19.1	2.0	5.7	chr5	172322370	172322662	(9215597)	+	(CCTT)n	Simple_repeat	1	299	(0)	3297182
250	28.8	0.0	7.6	chr5	172984851	172984929	(8553330)	+	L2a	LINE/L2	3350	3422	(4)	3298675
2752	3.2	0.3	0.0	chr5	172984965	172985272	(8552987)	+	AluY	SINE/Alu	1	309	(2)	3298676
1088	22.3	10.7	0.3	chr5	173578884	173579185	(7959074)	C	MLT1F-int	LTR/ERVL-MaLR	(1148)	341	5	3299865
2712	19.2	2.9	1.7	chr5	173579190	173579729	(7958530)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	2	3299865
473	31.6	4.2	1.0	chr5	174210510	174210717	(7327542)	C	MLT1K	LTR/ERVL-MaLR	(361)	234	20	3301085
2202	14.2	1.1	0.3	chr5	174497790	174498141	(7040118)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3301599
12483	7.9	0.3	0.0	chr5	174498142	174499716	(7038543)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3301599
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
15	13.9	0.0	0.0	chr5	178627215	178627238	(2911021)	+	(C)n	Simple_repeat	1	24	(0)	3309511
2626	10.5	1.3	1.1	chr5	179399130	179399503	(2138756)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3310769
11116	12.6	1.8	0.4	chr5	179399506	179401112	(2137147)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3310769
13	18.8	4.5	2.2	chr5	180631114	180631157	(907102)	+	(AGGTGTC)n	Simple_repeat	1	46	(0)	3312996
2499	7.0	0.0	0.0	chr5	180631192	180631489	(906770)	+	AluY	SINE/Alu	1	298	(13)	3312997
403	29.2	8.3	3.0	chr6	1166226	1166417	(169639562)	C	MLT1H1	LTR/ERVL-MaLR	(325)	270	35	3315720
2110	15.0	11.2	0.5	chr6	2323932	2324313	(168481666)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3317261
10160	14.6	1.7	0.1	chr6	2324314	2325918	(168480061)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3317261
429	29.8	9.3	7.5	chr6	3355843	3356096	(167449883)	+	L1ME3E	LINE/L1	5837	6095	(147)	3318774
1777	19.8	3.0	3.0	chr6	3479875	3480260	(167325719)	C	MLT1B-int	LTR/ERVL-MaLR	(831)	540	1	3318957
1169	21.4	7.9	13.9	chr6	3480261	3480569	(167325410)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	112	3318957
11817	11.0	2.5	0.4	chr6	4506020	4507614	(166298365)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	3320562
2033	11.4	10.2	2.0	chr6	4507618	4507966	(166298013)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3320563
1586	20.8	4.1	6.5	chr6	5640522	5640969	(165165010)	+	LTR56	LTR/ERV1	9	445	(0)	3322350
2456	9.4	0.8	0.8	chr6	8426340	8426692	(162379287)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	3326712
4951	11.5	2.3	0.0	chr6	8426696	8427414	(162378565)	+	THE1A-int	LTR/ERVL-MaLR	1	736	(844)	3326712
1351	14.4	12.1	6.4	chr6	9549336	9549669	(161256310)	+	MLT2A1	LTR/ERVL	102	515	(40)	3328246
50	0.0	0.0	0.0	chr6	9549670	9549712	(161256267)	+	(TG)n	Simple_repeat	1	43	(0)	3328247
296	20.9	12.4	15.7	chr6	9549713	9549747	(161256232)	+	MLT2A1	LTR/ERVL	516	547	(8)	3328246
2604	7.8	0.0	0.0	chr6	9549766	9550098	(161255881)	+	HERVL-int	LTR/ERVL	3063	3395	(2259)	3328248
2304	9.8	0.3	1.0	chr6	11045133	11045437	(159760542)	+	AluJb	SINE/Alu	4	306	(6)	3330625
235	17.5	0.0	0.0	chr6	11724947	11724986	(159080993)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	372	3331649
301	13.2	1.9	0.0	chr6	11725138	11725190	(159080789)	+	MER96	DNA/hAT-Tip100	1	54	(121)	3331650
2162	16.8	1.6	2.4	chr6	11725198	11725705	(159080274)	+	L1MB3	LINE/L1	5159	5667	(516)	3331651
285	37.9	0.7	6.7	chr6	11918683	11918846	(158887133)	C	MamSINE1	SINE/tRNA-RTE	(65)	225	72	3331905
573	25.8	6.7	4.8	chr6	13971003	13971123	(156834856)	C	L1ME3B	LINE/L1	(84)	6158	6025	3335240
1888	14.7	4.9	3.6	chr6	13971124	13971482	(156834497)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3335241
11100	8.8	2.3	6.1	chr6	13971483	13972018	(156833961)	+	THE1B-int	LTR/ERVL-MaLR	1	445	(1135)	3335241
2152	14.5	3.9	1.8	chr6	14062148	14062527	(156743452)	+	MLT1B	LTR/ERVL-MaLR	3	390	(0)	3335384
2009	18.1	5.1	0.1	chr6	14062528	14062981	(156742998)	+	MLT1B-int	LTR/ERVL-MaLR	1	600	(771)	3335384
3963	18.1	1.3	8.8	chr6	14938609	14939414	(155866565)	C	L1MC3	LINE/L1	(251)	7534	6761	3336810
510	25.5	3.6	9.2	chr6	14939415	14939621	(155866358)	C	Tigger12A	DNA/TcMar-Tigger	(527)	292	98	3336813
2147	10.2	0.7	0.0	chr6	14939623	14939907	(155866072)	C	AluSp	SINE/Alu	(15)	298	12	3336814
2605	11.1	0.8	0.3	chr6	17068798	17069150	(153736829)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3340497
12315	10.0	0.8	0.1	chr6	17069151	17070719	(153735260)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3340497
2377	9.2	0.3	0.0	chr6	17236396	17236690	(153569289)	+	AluSp	SINE/Alu	1	296	(17)	3340788
181	30.8	3.0	3.0	chr6	17337500	17337566	(153468413)	+	L2a	LINE/L2	2813	2879	(540)	3340959
2165	13.2	0.0	0.7	chr6	17337579	17337888	(153468091)	+	AluSx3	SINE/Alu	1	308	(3)	3340960
346	25.5	10.8	6.3	chr6	17410248	17410406	(153395573)	+	MER5A	DNA/hAT-Charlie	1	167	(22)	3341116
2153	8.0	4.4	1.1	chr6	17410573	17410858	(153395121)	C	AluY	SINE/Alu	(15)	296	1	3341117
805	25.7	8.6	1.0	chr6	18241673	18241865	(152564114)	C	MER58C	DNA/hAT-Charlie	(5)	210	2	3342696
339	31.6	16.3	3.1	chr6	18481911	18482132	(152323847)	C	HAL1	LINE/L1	(429)	2078	1822	3343136
682	28.6	16.3	6.2	chr6	18482133	18482903	(152323076)	C	HAL1ME	LINE/L1	(606)	1859	996	3343130
3949	16.4	2.4	4.4	chr6	18618357	18619154	(152186825)	C	MSTA-int	LTR/ERVL-MaLR	(864)	787	6	3343361
2296	17.1	1.9	2.4	chr6	18619165	18619590	(152186389)	C	MSTA	LTR/ERVL-MaLR	(4)	424	1	3343361
716	35.9	7.0	5.6	chr6	22212131	22212849	(148593130)	C	MLT1H-int	LTR/ERVL-MaLR	(659)	728	1	3348970
2112	14.7	3.0	3.0	chr6	22778237	22778600	(148027379)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3349721
9056	12.7	6.3	4.8	chr6	22778601	22780155	(148025824)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3349721
1377	24.6	12.3	3.7	chr6	24065881	24066340	(146739639)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3351365
544	27.8	8.3	3.4	chr6	24066341	24066443	(146739536)	+	MLT1D-int	LTR/ERVL-MaLR	1	104	(1267)	3351365
953	24.9	15.7	4.3	chr6	24066444	24066887	(146739092)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	3351366
1190	10.4	12.8	0.5	chr6	24686326	24686537	(146119442)	C	MSTB	LTR/ERVL-MaLR	(0)	426	185	3352352
58	13.2	3.3	5.8	chr6	24686539	24686688	(146119291)	+	(TTTC)n	Simple_repeat	1	155	(0)	3352353
45714	5.8	0.9	0.8	chr6	26075622	26081311	(144724668)	+	Harlequin-int	LTR/ERV1	1198	6896	(0)	3354604
13	13.7	2.9	2.9	chr6	26234147	26234180	(144571799)	+	(CACCC)n	Simple_repeat	1	35	(0)	3354869
12	15.7	2.6	5.0	chr6	26234322	26234360	(144571619)	+	G-rich	Low_complexity	1	40	(0)	3354870
1318	13.2	0.0	6.4	chr6	26563790	26563879	(144242100)	C	AluJb	SINE/Alu	(17)	295	210	3355480
678	4.8	0.0	0.0	chr6	27230555	27230637	(143575342)	C	tRNA-Leu-TTA	tRNA	(3)	83	1	3356540
2218	25.6	10.7	2.7	chr6	27565658	27566630	(143239349)	C	FordPrefect	DNA/hAT-Tip100	(464)	1219	4	3357125
2795	25.6	8.0	11.1	chr6	29270662	29272079	(141533900)	C	MLT1A-int	LTR/ERVL-MaLR	(1)	1370	2	3359936
1465	19.9	7.5	2.5	chr6	29272081	29272435	(141533544)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3359936
492	9.9	0.0	0.0	chr6	29804018	29804088	(141001891)	+	MSTB1	LTR/ERVL-MaLR	311	381	(0)	3360677
2817	16.8	0.8	0.0	chr6	29804089	29804563	(141001416)	+	MSTB1-int	LTR/ERVL-MaLR	1	479	(1172)	3360677
217	28.4	6.2	0.0	chr6	30444387	30444505	(140361474)	C	MIR3	SINE/MIR	(12)	218	82	3361607
25	0.0	0.0	0.0	chr6	30444797	30444823	(140361156)	+	(A)n	Simple_repeat	1	27	(0)	3361608
2105	13.2	6.6	1.1	chr6	31438035	31438394	(139367585)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3363321
2279	14.8	4.4	5.4	chr6	31438395	31439068	(139366911)	+	THE1D-int	LTR/ERVL-MaLR	1	656	(924)	3363321
465	18.4	0.0	0.0	chr6	31847509	31847584	(138958395)	C	AluSz6	SINE/Alu	(32)	280	205	3364017
20	18.4	0.0	0.0	chr6	31847601	31847637	(138958342)	+	(T)n	Simple_repeat	1	37	(0)	3364018
2796	7.1	0.3	0.0	chr6	32671737	32672090	(138133889)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3365225
11485	10.1	0.3	1.9	chr6	32672091	32673366	(138132613)	+	THE1A-int	LTR/ERVL-MaLR	1	1274	(306)	3365225
450	26.1	13.0	0.0	chr6	32952645	32952778	(137853201)	+	MIRb	SINE/MIR	59	212	(56)	3365655
4939	14.8	1.2	3.2	chr6	33139166	33139750	(137666229)	C	MER57-int	LTR/ERV1	(6946)	591	1	3365883
2781	12.0	0.5	0.0	chr6	33139751	33140149	(137665830)	C	MER57B1	LTR/ERV1	(0)	401	1	3365883
674	29.1	6.1	0.9	chr6	33666061	33666292	(137139687)	C	MIR	SINE/MIR	(0)	262	18	3366960
414	28.6	14.3	4.6	chr6	33666296	33666683	(137139296)	C	L1MC5a	LINE/L1	(2)	2775	2344	3366961
466	28.1	4.3	1.7	chr6	35602969	35603149	(135202830)	+	MIRb	SINE/MIR	47	232	(36)	3370730
2163	27.0	6.3	1.6	chr6	38439857	38440541	(132365438)	C	L2a	LINE/L2	(770)	2649	1931	3376397
2486	6.0	0.0	1.7	chr6	39069352	39069652	(131736327)	+	AluY	SINE/Alu	1	296	(15)	3377418
5554	20.1	9.8	5.7	chr6	39069653	39069823	(131736156)	C	MLT1A1-int	LTR/ERVL-MaLR	(1540)	195	1	3377417
2212	16.7	2.5	3.4	chr6	39069824	39070233	(131735746)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	3	3377417
5152	19.5	2.1	5.2	chr6	41261122	41263053	(129542926)	+	L1M2	LINE/L1	1775	3646	(3199)	3380847
4390	16.2	3.6	6.5	chr6	42467814	42468503	(128337476)	C	MLT1A1-int	LTR/ERVL-MaLR	(1031)	704	2	3383314
1624	18.3	11.8	0.0	chr6	42468503	42468824	(128337155)	C	MLT1A1	LTR/ERVL-MaLR	(3)	405	41	3383314
3165	23.5	6.7	2.6	chr6	42468837	42469947	(128336032)	C	L1MEf	LINE/L1	(3152)	3167	1097	3383304
7454	9.3	1.5	0.8	chr6	44864317	44865405	(125940574)	C	THE1B-int	LTR/ERVL-MaLR	(484)	1096	1	3387857
1927	15.8	4.1	3.6	chr6	44865406	44865767	(125940212)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3387857
17	17.0	8.7	0.0	chr6	46362380	46362425	(124443554)	+	(TA)n	Simple_repeat	1	50	(0)	3390071
881	26.2	11.8	1.3	chr6	47048920	47049368	(123756611)	+	L1ME4b	LINE/L1	5	506	(386)	3391144
303	25.6	1.1	4.3	chr6	47049485	47049578	(123756401)	+	MLT1J-int	LTR/ERVL-MaLR	1	91	(1296)	3391145
2125	13.7	0.0	0.0	chr6	47049630	47049929	(123756050)	+	AluSz	SINE/Alu	6	305	(7)	3391146
673	30.1	1.7	0.0	chr6	49362965	49363140	(121442839)	C	LTR67B	LTR/ERVL	(27)	593	415	3394260
2145	14.3	4.2	0.0	chr6	50648936	50649278	(120156701)	+	THE1B	LTR/ERVL-MaLR	5	362	(2)	3395952
10053	12.0	3.2	3.6	chr6	50649281	50650867	(120155112)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3395952
2316	7.1	0.7	3.9	chr6	53725499	53725806	(117080173)	+	AluSz	SINE/Alu	2	299	(13)	3400634
3280	27.2	6.0	2.9	chr6	54736564	54737583	(116068396)	C	L1PA14	LINE/L1	(5577)	1116	64	3402049
3579	26.3	4.8	2.5	chr6	56171854	56173152	(114632827)	+	L1MB1	LINE/L1	1338	2667	(4850)	3403849
1860	16.1	5.2	1.1	chr6	56270631	56270982	(114534997)	+	THE1D	LTR/ERVL-MaLR	15	381	(0)	3403965
10206	11.7	3.7	2.3	chr6	56270983	56272589	(114533390)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3403965
2067	15.0	4.7	2.5	chr6	62645107	62645462	(108160517)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3409514
10654	12.2	1.5	0.3	chr6	62645463	62647022	(108158957)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3409514
2906	12.0	5.8	0.4	chr6	65896905	65897391	(104908588)	C	THE1D-int	LTR/ERVL-MaLR	(1114)	517	3	3413673
1767	15.0	7.1	1.9	chr6	65897393	65897753	(104908226)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3413673
666	29.6	2.2	2.6	chr6	65912354	65912585	(104893394)	+	MLT1E2	LTR/ERVL-MaLR	387	617	(10)	3413692
1065	22.7	0.8	1.6	chr6	65912594	65912848	(104893131)	+	MLT1E2-int	LTR/ERVL-MaLR	4	256	(1115)	3413692
10432	14.5	1.0	0.8	chr6	66880402	66882024	(103923955)	C	MSTA-int	LTR/ERVL-MaLR	(5)	1626	1	3414825
1714	15.8	13.9	1.6	chr6	66882028	66882399	(103923580)	C	MSTA	LTR/ERVL-MaLR	(3)	425	1	3414825
4556	13.1	8.1	0.1	chr6	68858704	68859439	(101946540)	C	THE1B-int	LTR/ERVL-MaLR	(780)	800	1	3417201
2491	12.2	0.8	0.6	chr6	68859440	68859802	(101946177)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3417201
2228	20.1	3.0	12.7	chr6	69435357	69436063	(101369916)	C	MER92B	LTR/ERV1	(0)	636	1	3417913
11234	10.7	0.4	0.9	chr6	70741105	70742692	(100063287)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3419698
2177	12.7	3.0	3.0	chr6	70742693	70743056	(100062923)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3419698
4166	20.5	4.2	1.9	chr6	71783185	71784408	(99021571)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3421062
794	16.1	12.3	0.0	chr6	71784409	71784551	(99021428)	C	MSTA	LTR/ERVL-MaLR	(0)	428	266	3421062
1887	22.1	0.7	8.2	chr6	71784561	71784671	(99021308)	+	L1M3f	LINE/L1	2	98	(5230)	3421063
2302	11.7	0.0	0.0	chr6	71784672	71784962	(99021017)	C	AluSc8	SINE/Alu	(20)	291	1	3421064
2378	16.6	5.8	0.0	chr6	74985898	74986300	(95819679)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3425661
8320	17.7	1.9	8.2	chr6	74986301	74988062	(95817917)	+	MSTA-int	LTR/ERVL-MaLR	2	1651	(0)	3425661
9793	13.7	3.0	0.8	chr6	76082204	76083737	(94722242)	C	THE1C-int	LTR/ERVL-MaLR	(12)	1568	1	3427261
2291	12.5	1.9	5.2	chr6	76083738	76084125	(94721854)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3427261
2437	12.5	0.8	2.4	chr6	77273735	77274104	(93531875)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3428617
11612	11.0	0.6	0.5	chr6	77274105	77275775	(93530204)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3428617
2043	20.2	3.3	2.4	chr6	77361808	77362228	(93443751)	+	MSTB1	LTR/ERVL-MaLR	1	425	(7)	3428717
3282	26.4	5.9	4.9	chr6	77362252	77363141	(93442838)	C	MST-int	LTR/ERVL-MaLR	(486)	1165	253	3428718
2208	12.9	0.8	0.3	chr6	77961892	77962242	(92843737)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	3429425
11356	10.6	0.8	0.1	chr6	77962245	77963814	(92842165)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3429425
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
771	25.4	14.7	8.5	chr6	79469787	79470161	(91335818)	+	LTR67B	LTR/ERVL	190	591	(29)	3431277
1948	15.4	1.9	0.7	chr6	79992128	79992433	(90813546)	C	AluSz	SINE/Alu	(2)	310	1	3432056
2513	15.3	1.9	3.0	chr6	79992434	79992500	(90813479)	+	MSTB	LTR/ERVL-MaLR	366	426	(0)	3432055
3525	17.1	2.0	6.4	chr6	79992501	79992992	(90812987)	+	MSTB-int	LTR/ERVL-MaLR	1	484	(1167)	3432055
11256	10.2	0.7	1.3	chr6	84290761	84291248	(86514731)	C	THE1B-int	LTR/ERVL-MaLR	(1084)	496	1	3437671
2137	15.0	1.9	2.5	chr6	84291249	84291610	(86514369)	C	THE1B	LTR/ERVL-MaLR	(0)	364	5	3437671
19	25.7	4.0	3.9	chr6	87122597	87122695	(83683284)	+	(CAGCGC)n	Simple_repeat	1	103	(0)	3441091
16	11.8	5.1	2.4	chr6	87122768	87122806	(83683173)	+	(GCG)n	Simple_repeat	1	41	(0)	3441092
2428	14.5	3.5	0.0	chr6	88467503	88467915	(82338064)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3443159
8994	16.5	1.0	6.0	chr6	88467916	88469655	(82336324)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	3443159
5179	16.5	2.6	3.2	chr6	89036920	89037735	(81768244)	+	L1M1	LINE/L1	118	927	(6638)	3444023
2905	7.9	0.5	0.0	chr6	89037736	89038114	(81767865)	C	THE1C-int	LTR/ERVL-MaLR	(1199)	381	1	3444025
2439	10.3	4.0	0.8	chr6	89038115	89038477	(81767502)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3444025
1134	25.2	16.1	1.1	chr6	89038478	89038926	(81767053)	+	L2a	LINE/L2	1256	1784	(1635)	3444026
514	29.9	5.5	7.4	chr6	89376745	89376870	(81429109)	+	MIR	SINE/MIR	23	151	(111)	3444655
2445	15.2	6.0	3.3	chr6	89376871	89377292	(81428687)	+	Tigger2a	DNA/TcMar-Tigger	1	434	(0)	3444656
2117	15.9	1.1	1.4	chr6	92058216	92058578	(78747401)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3448454
4294	17.5	1.2	16.7	chr6	92058583	92059069	(78746910)	+	THE1B-int	LTR/ERVL-MaLR	3	451	(1180)	3448454
365	19.7	0.0	0.0	chr6	94035774	94035839	(76770140)	C	MER1B	DNA/hAT-Charlie	(0)	339	274	3450844
1695	17.1	6.4	1.4	chr6	94035840	94036195	(76769784)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3450845
9016	14.8	3.4	3.8	chr6	94036198	94037782	(76768197)	+	THE1C-int	LTR/ERVL-MaLR	3	1580	(0)	3450845
3080	20.0	4.0	7.6	chr6	96781888	96782633	(74023346)	+	MER50	LTR/ERV1	1	718	(16)	3454141
247	31.7	13.3	5.9	chr6	96782890	96783110	(74022869)	+	MLT1J2-int	LTR/ERVL-MaLR	103	342	(1045)	3454142
2405	9.1	0.0	0.0	chr6	96964372	96964679	(73841300)	+	AluY	SINE/Alu	1	308	(3)	3454378
10755	12.6	1.7	0.1	chr6	98232055	98233655	(72572324)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	3455975
411	15.5	0.0	1.4	chr6	98233659	98233730	(72572249)	C	THE1D	LTR/ERVL-MaLR	(0)	381	311	3455975
8675	6.0	1.2	0.0	chr6	98233749	98235683	(72570296)	C	L1PA6	LINE/L1	(11)	6143	4185	3455976
2975	11.2	2.5	0.0	chr6	98617042	98617471	(72188508)	C	THE1B-int	LTR/ERVL-MaLR	(1138)	442	2	3456452
2079	14.2	4.9	2.5	chr6	98617473	98617827	(72188152)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3456452
9056	12.0	2.0	12.4	chr6	99637204	99638561	(71167418)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1339	3	3457973
2472	10.7	2.8	0.8	chr6	99638564	99638920	(71167059)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3457973
2522	12.6	0.3	0.5	chr6	100038351	100038726	(70767253)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3458484
5194	12.9	9.7	5.8	chr6	100038727	100039670	(70766309)	+	THE1C-int	LTR/ERVL-MaLR	1	984	(596)	3458484
10853	11.2	0.7	0.6	chr6	102307480	102309057	(68496922)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3461410
2105	15.8	1.1	2.4	chr6	102309058	102309426	(68496553)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3461410
8902	13.5	5.6	4.6	chr6	103435929	103437490	(67368489)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	2	3462745
2135	13.8	6.7	0.0	chr6	103437493	103437841	(67368138)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	3462745
1336	14.8	12.9	7.0	chr6	104814644	104815000	(65990979)	+	MSTA	LTR/ERVL-MaLR	1	381	(0)	3464474
11060	10.7	1.7	1.9	chr6	104815001	104815370	(65990609)	+	MSTA-int	LTR/ERVL-MaLR	1	370	(1261)	3464474
1962	14.8	2.0	0.3	chr6	104815371	104815660	(65990319)	C	AluSz	SINE/Alu	(15)	297	3	3464475
411	27.8	0.8	4.8	chr6	106566092	106566234	(64239745)	C	L2a	LINE/L2	(2)	3424	3238	3467134
1354	7.4	0.0	0.0	chr6	106566465	106566637	(64239342)	C	AluSx1	SINE/Alu	(0)	312	135	3467135
13	31.2	1.3	3.9	chr6	107698519	107698594	(63107385)	+	GA-rich	Low_complexity	1	77	(0)	3469231
2390	10.4	0.0	0.0	chr6	108008725	108009031	(62796948)	C	AluY	SINE/Alu	(2)	309	3	3469776
10242	11.2	4.6	1.1	chr6	108009032	108009487	(62796492)	C	THE1C-int	LTR/ERVL-MaLR	(1084)	496	1	3469771
1853	13.6	11.6	2.6	chr6	108009488	108009833	(62796146)	C	THE1C	LTR/ERVL-MaLR	(0)	381	1	3469771
11624	10.0	0.9	0.4	chr6	108014922	108016492	(62789487)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3469792
2594	9.4	1.4	0.3	chr6	108016493	108016843	(62789136)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3469792
523	24.3	3.5	4.5	chr6	109223942	109224128	(61581851)	C	L1ME4a	LINE/L1	(5)	6119	5959	3471856
1054	15.0	6.5	1.9	chr6	109356174	109356413	(61449566)	+	LTR41	LTR/ERVL	503	768	(0)	3472038
640	33.4	5.7	5.1	chr6	109356416	109356453	(61449526)	+	ERVL-E-int	LTR/ERVL	4	33	(5634)	3472038
2778	12.1	1.4	7.0	chr6	109356454	109356907	(61449072)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3472039
2342	9.2	1.0	1.0	chr6	109863807	109864111	(60941868)	C	AluSx1	SINE/Alu	(7)	305	1	3472779
1251	22.2	12.2	5.1	chr6	109864112	109864435	(60941544)	+	MER31B	LTR/ERV1	94	465	(1)	3472778
20	12.4	0.0	0.0	chr6	114466046	114466080	(56339899)	+	(TTTA)n	Simple_repeat	1	35	(0)	3480169
887	18.2	4.6	14.0	chr6	114466185	114466427	(56339552)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3480170
2639	9.9	0.3	0.0	chr6	114659324	114659677	(56146302)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3480444
11210	10.1	0.7	2.1	chr6	114659679	114661279	(56144700)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	3480444
11339	10.2	0.4	0.3	chr6	114945043	114946620	(55859359)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3480767
1784	15.4	5.2	9.9	chr6	114946621	114947003	(55858976)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3480767
2078	13.8	4.8	2.6	chr6	115365606	115365955	(55440024)	+	THE1B	LTR/ERVL-MaLR	1	358	(6)	3481225
11041	10.5	1.4	0.2	chr6	115365956	115367513	(55438466)	+	THE1B-int	LTR/ERVL-MaLR	4	1580	(0)	3481225
10788	10.8	0.8	3.7	chr6	115494212	115495406	(55310573)	C	THE1B-int	LTR/ERVL-MaLR	(426)	1154	1	3481365
2130	14.3	2.2	2.5	chr6	115495407	115495771	(55310208)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3481365
1541	16.7	17.5	1.4	chr6	116848990	116849347	(53956632)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3483165
11325	11.7	1.2	1.1	chr6	116849349	116849703	(53956276)	+	MSTA-int	LTR/ERVL-MaLR	2	362	(1269)	3483165
391	29.2	8.6	5.1	chr6	116899051	116899443	(53906536)	+	L1M5	LINE/L1	4341	4748	(1398)	3483224
313	28.0	10.8	0.0	chr6	116899826	116900034	(53905945)	+	L1M5	LINE/L1	5155	5388	(735)	3483224
9174	8.2	1.3	0.5	chr6	117595399	117597448	(53208531)	C	L1PB1	LINE/L1	(0)	6151	4090	3484114
2556	12.8	6.5	1.2	chr6	119060588	119060992	(51744987)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3486056
8523	15.8	3.1	0.1	chr6	119084289	119085671	(51720308)	C	MSTA-int	LTR/ERVL-MaLR	(205)	1426	1	3486089
2712	12.7	4.4	1.7	chr6	119085672	119086087	(51719892)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3486089
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
20	11.6	0.0	0.0	chr6	119443567	119443595	(51362384)	+	(T)n	Simple_repeat	1	29	(0)	3486585
225	23.7	10.6	0.0	chr6	119443643	119443701	(51362278)	+	L2a	LINE/L2	562	627	(2792)	3486586
358	34.4	6.5	0.6	chr6	119443725	119443882	(51362097)	C	MIRb	SINE/MIR	(1)	267	100	3486587
233	25.0	10.1	0.0	chr6	119443880	119443959	(51362020)	+	MIR	SINE/MIR	126	214	(48)	3486588
770	26.4	14.2	6.1	chr6	119716671	119717126	(51088853)	C	LTR33	LTR/ERVL	(7)	508	10	3486935
1730	20.1	7.0	1.1	chr6	119889505	119889882	(50916097)	+	MLT1A1	LTR/ERVL-MaLR	1	402	(6)	3487149
7387	22.3	4.9	3.3	chr6	119889889	119891594	(50914385)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1735	(0)	3487149
1927	16.8	3.3	3.6	chr6	121564323	121564687	(49241292)	+	MSTA	LTR/ERVL-MaLR	1	364	(0)	3489243
9343	10.4	0.6	0.1	chr6	121564688	121566040	(49239939)	+	MSTA-int	LTR/ERVL-MaLR	1	1360	(220)	3489243
25581	3.6	0.3	0.0	chr6	121566043	121571330	(49234649)	C	L1PA3	LINE/L1	(3)	6152	849	3489244
284	2.6	7.1	0.0	chr6	121571331	121571369	(49234610)	+	MSTA	LTR/ERVL-MaLR	340	381	(0)	3489243
9589	16.7	1.8	0.1	chr6	121571370	121572972	(49233007)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3489243
2273	12.2	3.5	1.6	chr6	121800642	121801008	(49004971)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	3489607
9482	12.6	7.2	3.9	chr6	121801011	121802583	(49003396)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3489607
1984	24.1	7.9	1.9	chr6	122315504	122316016	(48489963)	+	MLT1E2	LTR/ERVL-MaLR	80	625	(2)	3490251
2808	28.7	10.1	2.5	chr6	122316019	122317345	(48488634)	+	MLT1E2-int	LTR/ERVL-MaLR	1	1408	(1)	3490251
5027	9.6	2.8	0.5	chr6	123283058	123283836	(47522143)	+	L1PB1	LINE/L1	2729	3525	(2621)	3491496
526	11.2	1.1	1.1	chr6	123283856	123283945	(47522034)	C	L1PB	LINE/L1	(2579)	3567	3478	3491497
793	7.1	0.0	5.1	chr6	123283946	123284063	(47521916)	+	L1PA5	LINE/L1	6040	6151	(3)	3491498
2564	10.0	1.1	0.0	chr6	124569430	124569780	(46236199)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3493179
11174	10.5	1.1	0.6	chr6	124569781	124571352	(46234627)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3493179
2444	12.4	0.8	0.5	chr6	126891589	126891962	(43914017)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3496151
9647	11.8	3.5	5.8	chr6	126891963	126893579	(43912400)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3496151
10686	11.6	1.2	1.0	chr6	128375575	128377151	(42428828)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3498055
2140	13.4	1.9	4.0	chr6	128377152	128377523	(42428456)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3498055
503	26.8	0.8	5.2	chr6	128377524	128377555	(42428424)	+	L2a	LINE/L2	3391	3420	(6)	3498053
4544	15.5	5.6	4.4	chr6	128820881	128821991	(41983988)	+	L1MC1	LINE/L1	5186	6344	(0)	3498687
2383	9.9	0.3	0.0	chr6	129706606	129706907	(41099072)	+	AluSx	SINE/Alu	2	304	(8)	3499820
5289	11.0	2.6	1.3	chr6	130223672	130224435	(40581544)	C	LTR1A1	LTR/ERV1	(25)	774	1	3500614
1581	15.0	12.8	1.5	chr6	131007121	131007451	(39798528)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	3501678
11363	10.9	1.1	0.5	chr6	131007454	131009065	(39796914)	+	THE1C-int	LTR/ERVL-MaLR	3	1624	(7)	3501678
1687	13.3	2.2	4.6	chr6	131694587	131694871	(39111108)	+	AluSx1	SINE/Alu	35	312	(0)	3502739
20523	6.6	0.4	0.7	chr6	133270214	133272806	(37533173)	C	HERVL-int	LTR/ERVL	(0)	5654	3069	3505017
1633	12.6	0.0	0.0	chr6	133272807	133273028	(37532951)	+	LSU-rRNA_Hsa	rRNA	1704	1925	(3110)	3505018
2946	8.1	5.6	0.9	chr6	133273049	133273086	(37532893)	C	MLT2A1	LTR/ERVL	(0)	444	390	3505019
31	3.3	0.0	0.0	chr6	133273087	133273117	(37532862)	+	(AT)n	Simple_repeat	1	31	(0)	3505020
2946	8.1	5.6	0.9	chr6	133273118	133273501	(37532478)	C	MLT2A1	LTR/ERVL	(55)	389	1	3505019
320	35.0	10.2	4.2	chr6	135051818	135052148	(35753831)	C	L2c	LINE/L2	(5)	3382	3030	3507871
4719	9.2	11.9	3.9	chr6	136068054	136068423	(34737556)	C	MER4D1	LTR/ERV1	(0)	900	538	3509319
2503	4.6	0.0	0.3	chr6	136068424	136068730	(34737249)	C	AluY	SINE/Alu	(0)	311	1	3509320
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
3180	24.1	9.2	8.0	chr6	138809483	138809837	(31996142)	C	L1ME3B	LINE/L1	(2230)	3916	3548	3513589
1083	30.9	3.4	3.1	chr6	138809842	138810285	(31995694)	+	MLT1F2-int	LTR/ERVL-MaLR	1	445	(942)	3513599
391	24.1	26.0	0.0	chr6	139125341	139125531	(31680448)	C	MIR	SINE/MIR	(0)	262	5	3514164
2981	14.1	10.6	5.2	chr6	139133089	139133686	(31672293)	+	MER51A	LTR/ERV1	1	634	(0)	3514179
17	22.0	0.0	9.6	chr6	139975838	139975920	(30830059)	+	(CTTCC)n	Simple_repeat	1	83	(0)	3515491
1807	17.2	12.8	0.8	chr6	140432852	140433227	(30372752)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3516036
10442	13.0	1.8	0.4	chr6	140433228	140434834	(30371145)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3516036
13705	17.2	4.0	1.3	chr6	140798713	140799605	(30006374)	C	L1MA4	LINE/L1	(2852)	3473	2572	3516496
6159	16.9	4.4	2.7	chr6	140799609	140800845	(30005134)	C	L1MA4	LINE/L1	(4068)	1260	2	3516496
11184	10.2	1.0	0.6	chr6	141504725	141506297	(29299682)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	1	3517352
1943	12.8	7.4	2.6	chr6	141506298	141506643	(29299336)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3517352
11174	12.5	5.1	2.9	chr6	141760564	141761290	(29044689)	C	L1PREC2	LINE/L1	(2918)	3228	2509	3517664
10097	15.2	3.4	1.4	chr6	141761291	141761968	(29044011)	+	Tigger1	DNA/TcMar-Tigger	631	1314	(1104)	3517666
11300	10.4	1.1	0.0	chr6	142426070	142427632	(28378347)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3518491
2180	15.8	0.6	2.2	chr6	142427633	142428002	(28377977)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3518491
1885	14.1	7.5	1.4	chr6	142572990	142573341	(28232638)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3518684
10225	12.4	6.2	0.2	chr6	142573344	142574874	(28231105)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3518685
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
2140	13.4	0.0	0.0	chr6	143217518	143217808	(27588171)	C	AluSx1	SINE/Alu	(21)	291	1	3519549
11336	9.1	2.2	1.1	chr6	143784996	143786558	(27019421)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3520420
2780	7.1	0.6	0.0	chr6	143786559	143786911	(27019068)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3520420
437	26.1	9.8	5.5	chr6	143992324	143992469	(26813510)	+	MLT1B	LTR/ERVL-MaLR	278	443	(5)	3520668
1085	27.1	3.3	9.3	chr6	143992474	143992707	(26813272)	+	MLT1B-int	LTR/ERVL-MaLR	1	223	(1164)	3520668
2178	9.9	4.0	1.4	chr6	143992708	143993000	(26812979)	+	AluSz	SINE/Alu	1	301	(11)	3520669
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
15	21.8	2.9	0.0	chr6	144216902	144216935	(26589044)	+	(TC)n	Simple_repeat	1	35	(0)	3521046
2624	11.0	0.8	0.3	chr6	145158446	145158818	(25647161)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3522384
10237	12.2	3.2	0.4	chr6	145158819	145160354	(25645625)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3522384
11606	8.8	0.8	1.3	chr6	145441890	145442314	(25363665)	C	THE1A-int	LTR/ERVL-MaLR	(1151)	429	2	3522783
1732	18.6	5.5	2.8	chr6	145442316	145442669	(25363310)	C	THE1A	LTR/ERVL-MaLR	(0)	364	1	3522783
1171	25.9	0.9	7.5	chr6	146143996	146144366	(24661613)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	29	3523642
1477	19.9	1.9	0.0	chr6	146144369	146144629	(24661350)	+	MSTC	LTR/ERVL-MaLR	163	428	(0)	3523643
5065	28.2	4.4	4.2	chr6	146144632	146146103	(24659876)	+	MSTC-int	LTR/ERVL-MaLR	2	1497	(238)	3523643
11034	9.4	2.5	1.4	chr6	146447807	146449369	(24356610)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3524041
2338	13.2	1.9	2.5	chr6	146449370	146449735	(24356244)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3524041
6739	16.2	3.2	1.1	chr6	148664453	148665702	(22140277)	C	L1MA4	LINE/L1	(2580)	4982	3698	3527268
7144	6.5	15.6	2.1	chr6	148665703	148666794	(22139185)	+	MER11A	LTR/ERVK	1	1266	(0)	3527270
14	14.4	1.8	8.9	chr6	148747132	148747186	(22058793)	+	G-rich	Low_complexity	1	56	(0)	3527384
12	22.2	6.4	0.0	chr6	149133093	149133139	(21672840)	+	GA-rich	Low_complexity	1	50	(0)	3527956
18	3.5	0.0	6.1	chr6	149266272	149266304	(21539675)	+	(TGTGTC)n	Simple_repeat	1	33	(0)	3528149
313	36.1	3.6	0.9	chr6	149266306	149266520	(21539459)	+	MamRep605	LTR?	304	524	(325)	3528150
2120	12.8	0.7	0.3	chr6	150887461	150887756	(19918223)	C	AluSz	SINE/Alu	(15)	297	1	3530921
250	32.7	4.4	8.5	chr6	151539291	151539808	(19266171)	+	L2-3_Crp	LINE/L2	747	1242	(854)	3532211
1479	28.6	9.8	8.2	chr6	151539815	151540053	(19265926)	+	L2a	LINE/L2	2489	2725	(694)	3532209
241	16.3	2.3	0.0	chr6	151540054	151540096	(19265883)	C	MLT1A0-int	LTR/ERVL-MaLR	(1691)	44	1	3532212
1828	18.2	1.6	9.4	chr6	151540097	151540311	(19265668)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	153	3532212
38	4.5	0.0	2.1	chr6	151540312	151540359	(19265620)	+	(CTC)n	Simple_repeat	1	48	(0)	3532213
1828	18.2	1.6	9.4	chr6	151540360	151540373	(19265606)	C	MLT1A0	LTR/ERVL-MaLR	(213)	152	152	3532212
2119	14.2	0.0	0.7	chr6	151540374	151540686	(19265293)	C	AluSz6	SINE/Alu	(0)	312	1	3532214
2375	11.0	0.6	3.0	chr6	152076091	152076454	(18729525)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3533021
11476	10.1	1.1	0.8	chr6	152076455	152078028	(18727951)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3533021
19	3.9	0.0	0.0	chr6	152546957	152546983	(18258996)	+	(AAAAG)n	Simple_repeat	1	27	(0)	3533673
442	23.4	8.3	4.4	chr6	152546998	152547235	(18258744)	+	MLT1H	LTR/ERVL-MaLR	340	579	(0)	3533672
1813	30.1	10.1	7.5	chr6	152547236	152547911	(18258068)	+	MLT1H-int	LTR/ERVL-MaLR	1	714	(695)	3533672
785	21.7	6.8	4.7	chr6	152948037	152948268	(17857711)	C	MIR	SINE/MIR	(12)	250	14	3534246
314	33.8	11.2	0.6	chr6	154613264	154613466	(16192513)	+	L2c	LINE/L2	2994	3221	(166)	3536704
1704	19.5	10.3	2.6	chr6	155782351	155782771	(15023208)	+	MER31B	LTR/ERV1	10	466	(0)	3538563
257	34.9	2.0	1.4	chr6	158085664	158085811	(12720168)	C	MER5B	DNA/hAT-Charlie	(29)	149	1	3541917
10865	10.5	0.6	0.3	chr6	158392998	158394457	(12411522)	C	THE1B-int	LTR/ERVL-MaLR	(167)	1464	1	3542459
1501	17.3	16.1	5.3	chr6	158394458	158394501	(12411478)	C	THE1B	LTR/ERVL-MaLR	(0)	428	399	3542459
2573	6.7	0.0	1.3	chr6	158394502	158394814	(12411165)	+	AluYj4	SINE/Alu	1	309	(2)	3542462
4769	25.3	10.9	4.4	chr6	158959971	158960530	(11845449)	C	MSTC-int	LTR/ERVL-MaLR	(1139)	596	2	3543448
2444	11.3	6.3	3.4	chr6	158960531	158960942	(11845037)	C	MSTC	LTR/ERVL-MaLR	(2)	426	2	3543448
1718	21.4	8.5	0.3	chr6	159944006	159944361	(10861618)	+	MSTD	LTR/ERVL-MaLR	1	388	(8)	3544869
5260	23.1	5.1	4.1	chr6	159944371	159945681	(10860298)	+	MSTD-int	LTR/ERVL-MaLR	2	1326	(409)	3544869
9108	13.8	3.6	6.7	chr6	160303084	160304766	(10501213)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	3	3545293
2566	11.9	0.6	0.3	chr6	160304769	160305131	(10500848)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3545293
15	0.0	0.0	0.0	chr6	160741619	160741635	(10064344)	+	(TC)n	Simple_repeat	1	17	(0)	3545737
23549	9.2	2.1	0.5	chr6	160741668	160746893	(10059086)	C	L1PREC2	LINE/L1	(3)	8152	2833	3545738
246	15.4	5.7	2.4	chr6	161374165	161374761	(9431218)	+	(GT)n	Simple_repeat	1	631	(0)	3546590
1522	30.4	5.0	5.0	chr6	161549779	161550723	(9255256)	C	L2a	LINE/L2	(2)	3424	2483	3546860
670	31.5	4.6	1.8	chr6	164212681	164213020	(6592959)	+	MLT1G1	LTR/ERVL-MaLR	16	321	(227)	3550480
313	18.6	2.1	3.4	chr6	164213082	164213175	(6592804)	+	MLT1G1	LTR/ERVL-MaLR	413	547	(8)	3550480
459	20.2	0.0	6.4	chr6	164213195	164213288	(6592691)	+	AluJo	SINE/Alu	218	305	(7)	3550481
2411	29.0	7.7	5.7	chr6	164213289	164214218	(6591761)	+	MLT1G1-int	LTR/ERVL-MaLR	18	1082	(407)	3550480
1537	19.8	6.7	4.5	chr6	164442343	164442739	(6363240)	+	MLT1A1	LTR/ERVL-MaLR	3	408	(0)	3550765
4955	21.4	2.7	5.4	chr6	164442740	164442926	(6363053)	+	MLT1A1-int	LTR/ERVL-MaLR	1	182	(1553)	3550765
1392	11.4	3.9	0.9	chr6	164442927	164443148	(6362831)	+	MER30	DNA/hAT-Charlie	1	229	(1)	3550766
9932	14.1	2.0	3.9	chr6	164525196	164526857	(6279122)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3550861
4423	14.4	3.5	1.3	chr6	164814294	164815076	(5990903)	C	THE1D-int	LTR/ERVL-MaLR	(830)	801	1	3551210
1702	16.3	8.4	2.8	chr6	164815077	164815435	(5990544)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3551210
10165	15.7	0.6	1.0	chr6	165258043	165259680	(5546299)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3551737
1834	14.0	11.4	10.0	chr6	165259681	165260101	(5545878)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3551737
439	11.5	0.0	0.0	chr6	165880321	165880381	(4925598)	+	LTR41	LTR/ERVL	706	766	(2)	3552495
240	21.4	0.0	0.0	chr6	165880388	165880429	(4925550)	C	tRNA-Leu-TTA	tRNA	(0)	86	45	3552496
1901	13.7	0.0	7.2	chr6	166252936	166253270	(4552709)	+	AluJb	SINE/Alu	2	312	(0)	3553001
9711	11.6	5.2	0.3	chr6	168185769	168187269	(2618710)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	3555235
1938	13.4	4.8	4.8	chr6	168187270	168187644	(2618335)	C	THE1D	LTR/ERVL-MaLR	(0)	375	1	3555235
2299	19.0	7.2	1.8	chr6	168187645	168187916	(2618063)	C	LTR45C	LTR/ERV1	(249)	290	3	3555234
400	23.8	0.0	0.0	chr6	169323249	169323332	(1482647)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	282	3556345
3211	21.1	5.0	5.5	chr6	169323482	169324313	(1481666)	C	MLT1A0-int	LTR/ERVL-MaLR	(907)	828	2	3556348
2112	17.3	1.6	1.1	chr6	169324317	169324678	(1481301)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	1	3556348
6785	13.8	0.3	0.1	chr6	170035837	170036872	(769107)	C	MSTA-int	LTR/ERVL-MaLR	(593)	1038	1	3557084
1729	17.0	13.3	3.1	chr6	170036873	170037255	(768724)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3557084
598	30.9	10.0	4.9	chr7	1854807	1855859	(157490114)	C	MLT1A0-int	LTR/ERVL-MaLR	(240)	1131	5	3560575
454	25.3	12.2	0.0	chr7	1855893	1856159	(157489814)	C	MLT1A0	LTR/ERVL-MaLR	(34)	331	1	3560575
1458	18.5	0.3	6.9	chr7	2555962	2556106	(156789867)	+	AluJb	SINE/Alu	7	133	(179)	3561629
1733	13.1	0.7	1.7	chr7	2843362	2843651	(156502322)	+	AluJr	SINE/Alu	1	287	(25)	3562096
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
1892	12.5	9.4	3.1	chr7	7630762	7631117	(151714856)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3571354
9490	10.8	9.8	0.8	chr7	7631121	7632601	(151713372)	+	THE1D-int	LTR/ERVL-MaLR	4	1631	(0)	3571354
2647	9.3	0.3	0.6	chr7	8524576	8524931	(150821042)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3572597
11452	9.9	0.4	0.3	chr7	8524932	8526510	(150819463)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3572597
764	22.5	0.0	5.5	chr7	8587295	8587476	(150758497)	C	FAM	SINE/Alu	(13)	172	1	3572686
3573	6.2	0.0	0.0	chr7	8587491	8587939	(150758034)	C	L1PA7	LINE/L1	(5)	6149	5701	3572687
5422	22.0	5.3	2.8	chr7	9211003	9212405	(150133568)	C	L1MC3	LINE/L1	(7)	7778	6338	3573458
190	33.3	12.7	0.0	chr7	9212415	9212510	(150133463)	+	L2a	LINE/L2	3316	3425	(1)	3573459
1915	12.1	11.3	3.0	chr7	10054071	10054403	(149291570)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3574473
11093	11.0	0.7	0.1	chr7	10054404	10055973	(149290000)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3574473
7159	13.3	1.5	0.7	chr7	10400580	10401658	(148944315)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	544	3574895
2364	10.8	3.0	0.0	chr7	10401646	10402005	(148943968)	C	THE1D-int	LTR/ERVL-MaLR	(1260)	371	1	3574895
1778	13.5	10.8	4.2	chr7	10402006	10402360	(148943613)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3574895
1764	18.7	11.2	1.8	chr7	11868297	11868683	(147477290)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3576718
10125	13.6	1.8	3.7	chr7	11868684	11869563	(147476410)	+	MSTA-int	LTR/ERVL-MaLR	1	849	(782)	3576718
3082	15.8	0.2	0.6	chr7	12098726	12099254	(147246719)	C	L1PA15	LINE/L1	(0)	6165	5639	3576988
2001	15.4	11.9	1.3	chr7	12099256	12099637	(147246336)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3576989
407	16.4	4.0	0.3	chr7	12099638	12099741	(147246232)	+	MSTA-int	LTR/ERVL-MaLR	1	112	(1623)	3576989
8354	14.3	1.4	1.1	chr7	12099747	12101206	(147244767)	C	L1PA15	LINE/L1	(780)	5366	3903	3576988
10712	13.7	0.7	0.4	chr7	12833370	12834996	(146510977)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3577925
1770	15.6	13.9	2.1	chr7	12834997	12835370	(146510603)	C	MSTA	LTR/ERVL-MaLR	(0)	428	4	3577925
1021	31.8	8.3	1.4	chr7	17028045	17028486	(142317487)	C	LTR16D1	LTR/ERVL	(232)	443	1	3583347
300	21.9	20.4	5.4	chr7	21319622	21319732	(138026241)	+	MER91C	DNA/hAT-Tip100	2	133	(7)	3589057
1664	16.3	9.8	6.1	chr7	21319742	21320133	(138025840)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3589058
3999	18.2	6.8	9.0	chr7	21320134	21320356	(138025617)	+	MLT1A1-int	LTR/ERVL-MaLR	1	256	(1479)	3589058
1907	16.8	0.3	1.6	chr7	21320357	21320659	(138025314)	+	AluJb	SINE/Alu	1	299	(13)	3589059
340	35.0	2.4	0.7	chr7	21659578	21659778	(137686195)	C	MIR3	SINE/MIR	(3)	205	2	3589558
4258	14.2	1.6	0.9	chr7	23213662	23214337	(136131636)	C	MER50	LTR/ERV1	(23)	711	31	3591919
298	27.5	3.2	0.0	chr7	23299006	23299096	(136046877)	C	L2a	LINE/L2	(39)	3387	3294	3592090
2432	12.8	1.1	0.6	chr7	23832551	23832910	(135513063)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3593032
10859	9.9	1.3	4.3	chr7	23832913	23834543	(135511430)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3593032
528	23.4	5.4	1.8	chr7	23965856	23966023	(135379950)	+	MER5B	DNA/hAT-Charlie	1	184	(5)	3593203
2461	16.4	6.6	0.7	chr7	25252848	25253306	(134092667)	+	MLT1D	LTR/ERVL-MaLR	18	505	(0)	3595171
1742	26.1	8.1	7.1	chr7	25253307	25254014	(134091959)	+	MLT1D-int	LTR/ERVL-MaLR	1	716	(773)	3595171
401	36.4	9.8	5.7	chr7	25928163	25928978	(133416995)	+	L2c	LINE/L2	2543	3382	(5)	3596126
1383	23.0	3.2	6.9	chr7	27682768	27683249	(131662724)	+	L1MA9	LINE/L1	5828	6287	(25)	3598849
1751	19.6	0.3	0.6	chr7	27683250	27683583	(131662390)	C	MLT1A0	LTR/ERVL-MaLR	(28)	337	5	3598853
273	23.7	2.6	2.6	chr7	27935922	27935999	(131409974)	C	MER96	DNA/hAT-Tip100	(0)	175	98	3599265
7189	13.8	3.4	1.3	chr7	30951798	30953278	(128392695)	C	THE1C-int	LTR/ERVL-MaLR	(4)	1627	6	3603914
1728	23.1	4.7	14.4	chr7	30953283	30953899	(128392074)	C	MLT2B3	LTR/ERVL	(0)	554	1	3603915
630	28.9	0.5	7.8	chr7	30962011	30962082	(128383891)	C	MIRb	SINE/MIR	(145)	123	57	3603926
1008	17.7	1.4	14.0	chr7	30962168	30962417	(128383556)	C	MER20	DNA/hAT-Charlie	(0)	219	2	3603928
1688	20.4	3.8	2.8	chr7	31482153	31482545	(127863428)	+	MER31A	LTR/ERV1	89	485	(0)	3604744
227	34.5	13.8	2.0	chr7	31482651	31482949	(127863024)	C	L2	LINE/L2	(799)	2620	2281	3604745
771	16.1	6.4	1.2	chr7	32846593	32846756	(126499217)	C	MER5A	DNA/hAT-Charlie	(16)	173	1	3606857
776	20.4	8.4	2.4	chr7	32905064	32905162	(126440811)	+	MER34	LTR/ERV1	315	410	(132)	3606965
2190	19.0	7.0	3.8	chr7	32905163	32905632	(126440341)	C	MER66B	LTR/ERV1	(0)	486	1	3606968
776	20.4	8.4	2.4	chr7	32905633	32905743	(126440230)	+	MER34	LTR/ERV1	411	539	(3)	3606965
1931	18.1	3.0	2.8	chr7	34382011	34382373	(124963600)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3609207
1867	12.2	1.9	0.0	chr7	34382374	34382677	(124963296)	+	THE1B-int	LTR/ERVL-MaLR	1	310	(1270)	3609207
6827	10.8	0.1	0.7	chr7	34382649	34383634	(124962339)	+	THE1B-int	LTR/ERVL-MaLR	601	1580	(0)	3609207
11580	9.7	0.9	0.1	chr7	34882500	34884062	(124461911)	C	THE1A-int	LTR/ERVL-MaLR	(4)	1576	1	3609876
2586	9.2	1.7	0.0	chr7	34884063	34884411	(124461562)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3609876
51	10.8	6.9	0.0	chr7	39884316	39884416	(119461557)	+	A-rich	Low_complexity	1	108	(0)	3617325
2381	10.8	0.0	1.6	chr7	42777829	42778144	(116567829)	C	AluY	SINE/Alu	(0)	311	1	3621693
1655	18.0	11.9	4.3	chr7	42778145	42778398	(116567575)	+	MSTA	LTR/ERVL-MaLR	164	428	(0)	3621692
11250	11.7	0.7	1.8	chr7	42778401	42780047	(116565926)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	3621694
119	33.4	2.7	2.6	chr7	43247636	43248161	(116097812)	+	A-rich	Low_complexity	1	540	(0)	3622339
1959	11.5	6.1	5.0	chr7	43715776	43716133	(115629840)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3623043
11435	9.8	0.9	0.2	chr7	43716136	43717703	(115628270)	+	THE1-int	LTR/ERVL-MaLR	1	1580	(0)	3623044
1974	10.4	0.0	0.0	chr7	44953982	44954232	(114391741)	C	AluSz	SINE/Alu	(21)	291	41	3625245
1090	21.1	15.6	8.6	chr7	44954268	44954522	(114391451)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	95	3625246
2111	12.1	3.0	0.3	chr7	44954523	44954819	(114391154)	C	AluSq2	SINE/Alu	(8)	305	1	3625247
35	0.0	0.0	0.0	chr7	45987379	45987416	(113358557)	+	(A)n	Simple_repeat	1	38	(0)	3626678
2018	20.7	2.6	2.6	chr7	53833756	53834181	(105511792)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3636709
7064	20.8	1.7	10.2	chr7	53834182	53835965	(105510008)	+	MSTB-int	LTR/ERVL-MaLR	1	1631	(0)	3636709
213	30.5	10.9	0.0	chr7	55573169	55573250	(103772723)	C	L2b	LINE/L2	(6)	3369	3278	3638829
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2212	12.7	0.3	0.0	chr7	64001897	64002179	(95343794)	C	AluSg	SINE/Alu	(25)	285	2	3645689
1807	20.6	3.0	3.0	chr7	64002180	64002533	(95343440)	C	L1PREC2	LINE/L1	(2973)	3173	2821	3645688
185	22.0	3.8	5.7	chr7	65750598	65750650	(93595323)	+	MamRTE1	LINE/RTE-BovB	1637	1688	(2124)	3648385
1647	10.9	2.6	4.4	chr7	66681394	66681667	(92664306)	C	AluJr	SINE/Alu	(7)	305	37	3650581
19171	7.7	3.9	0.1	chr7	66906837	66909329	(92436644)	C	HERVL-int	LTR/ERVL	(0)	5654	3064	3651077
3243	9.5	2.4	0.7	chr7	66909345	66909789	(92436184)	C	MLT2A2	LTR/ERVL	(0)	453	1	3651078
12023	8.9	0.3	0.9	chr7	67528800	67530389	(91815584)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3652445
2699	8.8	0.6	0.3	chr7	67530390	67530743	(91815230)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3652445
7454	18.1	6.7	7.7	chr7	69017977	69019645	(90326328)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	3655738
2398	18.0	4.5	0.0	chr7	69019646	69020050	(90325923)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	3655738
691	25.9	13.9	0.8	chr7	69502412	69502672	(89843301)	C	MLT2F	LTR/ERVL	(362)	301	1	3656834
1112	30.8	8.7	7.7	chr7	69502960	69503318	(89842655)	C	LTR16E2	LTR/ERVL	(9)	559	215	3656835
22	18.4	0.0	0.0	chr7	70605498	70605507	(88740466)	+	(T)n	Simple_repeat	1	10	(0)	3658552
27	5.6	2.6	0.0	chr7	70605508	70605545	(88740428)	+	(TCTT)n	Simple_repeat	1	39	(0)	3658553
22	18.4	0.0	0.0	chr7	70605546	70605578	(88740395)	+	(T)n	Simple_repeat	1	33	(0)	3658554
17	20.6	1.9	1.9	chr7	70605579	70605587	(88740386)	+	(TTTGTC)n	Simple_repeat	5	46	(0)	3658555
749	23.2	15.0	6.5	chr7	72828500	72828723	(86517250)	+	L1MC5a	LINE/L1	2371	2625	(152)	3663155
2406	20.7	2.4	0.5	chr7	74438031	74438583	(84907390)	C	MLT1A1-int	LTR/ERVL-MaLR	(1118)	617	5	3667089
1699	18.2	8.3	6.7	chr7	74438587	74438987	(84906986)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3667089
242	30.2	0.0	0.0	chr7	75627211	75627273	(83718700)	+	L2a	LINE/L2	3364	3426	(0)	3670096
247	27.5	12.1	0.0	chr7	75627486	75627565	(83718408)	+	MIRb	SINE/MIR	109	199	(69)	3670097
569	24.9	2.6	7.5	chr7	75628109	75628308	(83717665)	+	L2a	LINE/L2	3237	3426	(0)	3670098
2138	12.9	0.0	0.0	chr7	75628476	75628778	(83717195)	C	AluSz	SINE/Alu	(9)	303	1	3670099
1941	16.7	6.1	5.9	chr7	76293519	76293901	(83052072)	C	MER31A	LTR/ERV1	(8)	477	75	3671800
2166	14.0	0.7	0.0	chr7	79019538	79019844	(80326129)	C	AluSx	SINE/Alu	(3)	309	1	3676223
1794	15.1	5.9	7.9	chr7	79019845	79019890	(80326083)	+	THE1D	LTR/ERVL-MaLR	342	375	(0)	3676222
10881	12.9	1.1	0.9	chr7	79019893	79020484	(80325489)	+	THE1D-int	LTR/ERVL-MaLR	2	593	(1038)	3676222
9534	14.9	5.0	0.0	chr7	83182184	83183732	(76162241)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3681925
1821	17.5	12.9	1.9	chr7	83183733	83184111	(76161862)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	3681925
6413	21.4	10.5	1.8	chr7	83184112	83184621	(76161352)	C	L1MA6	LINE/L1	(2167)	3979	3470	3681924
2142	14.1	5.0	0.6	chr7	85931757	85932119	(73413854)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	3685383
9796	13.6	2.9	0.7	chr7	85932121	85933665	(73412308)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3685383
1941	17.5	2.4	2.1	chr7	86151065	86151437	(73194536)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3685623
9326	13.8	4.1	3.7	chr7	86151440	86153011	(73192962)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	3685623
10430	9.3	3.5	5.8	chr7	87204309	87205924	(72140049)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	3686916
2005	12.1	9.1	3.2	chr7	87205925	87206266	(72139707)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3686916
12566	9.8	0.2	0.0	chr7	87298234	87299810	(72046163)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3687024
2096	16.1	4.1	3.6	chr7	87299811	87300172	(72045801)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3687024
18	0.0	0.0	0.0	chr7	87934661	87934680	(71411293)	+	(T)n	Simple_repeat	1	20	(0)	3687846
2662	6.2	0.0	0.0	chr7	88030835	88031143	(71314830)	+	AluY	SINE/Alu	1	309	(2)	3687987
2046	13.8	8.9	4.7	chr7	88031144	88031211	(71314762)	+	MSTA	LTR/ERVL-MaLR	367	428	(0)	3687986
7524	16.2	9.5	1.4	chr7	88031214	88032662	(71313311)	+	MSTA-int	LTR/ERVL-MaLR	3	1580	(0)	3687986
30	3.1	0.0	0.0	chr7	91439979	91440011	(67905962)	+	(AGGG)n	Simple_repeat	1	33	(0)	3692469
2530	10.9	2.4	0.0	chr7	91440013	91440380	(67905593)	+	THE1D	LTR/ERVL-MaLR	5	381	(0)	3692470
10632	11.1	3.0	0.7	chr7	91440381	91441924	(67904049)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3692470
10744	12.0	2.6	0.8	chr7	91680324	91681923	(67664050)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	3692759
2151	16.8	1.6	0.5	chr7	91681926	91682302	(67663671)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3692759
4848	22.1	9.7	5.3	chr7	92205926	92207380	(67138593)	+	L1MA4	LINE/L1	945	2470	(4379)	3693527
288	8.1	0.0	0.0	chr7	92207394	92207430	(67138543)	+	MADE1	DNA/TcMar-Mariner	1	37	(43)	3693528
13505	16.0	3.6	3.5	chr7	92207432	92207575	(67138398)	+	L1MA4	LINE/L1	3196	3339	(3506)	3693527
2168	12.8	0.3	0.6	chr7	92207576	92207887	(67138086)	+	AluSz6	SINE/Alu	2	312	(0)	3693529
13505	16.0	3.6	3.5	chr7	92207888	92209780	(67136193)	+	L1MA4	LINE/L1	3340	5255	(1590)	3693527
2057	30.4	5.1	4.6	chr7	92975928	92976862	(66369111)	+	L2	LINE/L2	1973	2912	(507)	3694660
11385	10.7	0.6	0.1	chr7	94319774	94321344	(65024629)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	3696451
2615	8.5	0.3	4.1	chr7	94321346	94321476	(65024497)	C	THE1A	LTR/ERVL-MaLR	(0)	355	232	3696451
2185	10.7	0.7	0.0	chr7	94321477	94321792	(65024181)	C	AluSp	SINE/Alu	(0)	313	1	3696452
1874	15.4	2.5	3.9	chr7	94843369	94843732	(64502241)	+	THE1B	LTR/ERVL-MaLR	6	364	(0)	3697137
11385	10.3	0.9	0.1	chr7	94843733	94845299	(64500674)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3697137
411	2.3	0.0	0.0	chr7	100513300	100513343	(58832630)	+	AluYk11	SINE/Alu	1	44	(267)	3706767
1681	18.2	1.7	1.0	chr7	100513349	100513644	(58832329)	+	AluJr	SINE/Alu	1	298	(14)	3706768
241	23.0	20.6	3.5	chr7	100544862	100545005	(58800968)	+	L3b	LINE/CR1	4940	5114	(118)	3706852
2736	27.4	8.9	4.8	chr7	101308329	101309221	(58036752)	+	L1M2	LINE/L1	2	1495	(5621)	3708475
2401	9.0	0.0	0.6	chr7	102618548	102618858	(56727115)	+	AluSq2	SINE/Alu	1	309	(4)	3711430
1229	18.0	6.4	1.3	chr7	102618861	102619158	(56726815)	+	L1MB2	LINE/L1	5817	6130	(41)	3711431
721	25.6	0.9	8.2	chr7	105270348	105270410	(54075563)	+	MIRb	SINE/MIR	22	72	(196)	3715425
2400	8.4	0.7	0.3	chr7	105270411	105270708	(54075265)	C	AluSq2	SINE/Alu	(14)	299	1	3715426
1847	12.1	0.0	3.3	chr7	105580938	105581210	(53764763)	+	AluSq2	SINE/Alu	1	264	(49)	3716177
2000	12.8	0.0	0.0	chr7	105883233	105883505	(53462468)	C	AluSx1	SINE/Alu	(2)	310	38	3716742
1250	26.2	11.1	5.7	chr7	105883506	105884446	(53461527)	C	L1ME3G	LINE/L1	(419)	505	6	3716741
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
11374	9.5	0.8	1.0	chr7	106340585	106342168	(53003805)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3717448
2236	11.4	5.8	2.6	chr7	106342169	106342520	(53003453)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3717448
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
256	23.5	14.0	0.0	chr7	108423670	108423767	(50922206)	C	Tigger15a	DNA/TcMar-Tigger	(113)	602	489	3720504
11235	11.5	1.7	0.3	chr7	108556220	108557828	(50788145)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3720717
1724	18.0	12.8	2.4	chr7	108557829	108558210	(50787763)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3720717
10340	10.6	3.0	4.1	chr7	110672422	110674018	(48671955)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3723335
2746	10.2	0.8	0.0	chr7	110674019	110674390	(48671583)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3723335
4085	16.1	7.6	1.8	chr7	112278740	112279583	(47066390)	C	L1MB1	LINE/L1	(5)	6163	5267	3725550
183	28.6	5.1	0.0	chr7	113068208	113068263	(46277710)	C	L2b	LINE/L2	(1388)	2031	1973	3726656
212	37.6	0.5	5.3	chr7	113068314	113068521	(46277452)	C	L2b	LINE/L2	(1551)	1868	1671	3726656
228	33.7	9.8	0.0	chr7	113068609	113068700	(46277273)	C	MamTip2	DNA/hAT-Tip100	(180)	125	24	3726661
9610	12.7	3.9	3.2	chr7	113958570	113960139	(45385834)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	3727745
1854	16.2	4.7	2.2	chr7	113960140	113960510	(45385463)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3727745
10338	11.4	3.2	0.1	chr7	114486466	114487995	(44857978)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3728462
2385	13.8	0.3	0.3	chr7	114487996	114488359	(44857614)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3728462
4247	10.0	2.2	0.2	chr7	114762586	114763204	(44582769)	C	L1PA8	LINE/L1	(1464)	4682	4051	3728791
1576	20.8	5.5	11.8	chr7	115052369	115052694	(44293279)	+	MLT1D	LTR/ERVL-MaLR	1	304	(201)	3729188
2226	13.9	3.7	0.8	chr7	115052695	115053064	(44292909)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3729189
568	28.0	7.0	6.6	chr7	116233463	116233668	(43112305)	+	MIRb	SINE/MIR	26	228	(40)	3730766
11	11.3	6.9	0.0	chr7	116862408	116862436	(42483537)	+	(CACGCG)n	Simple_repeat	1	31	(0)	3731664
16	4.5	0.0	0.0	chr7	116862569	116862591	(42483382)	+	(GCC)n	Simple_repeat	1	23	(0)	3731665
16	14.1	5.1	0.0	chr7	116862909	116862955	(42483018)	+	G-rich	Low_complexity	1	49	(0)	3731666
2179	15.2	0.8	1.6	chr7	118134227	118134593	(41211380)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3733484
12104	8.5	0.2	0.0	chr7	118134594	118136170	(41209803)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3733484
2016	19.0	7.5	0.8	chr7	118589291	118589687	(40756286)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3734127
9214	13.6	3.6	4.3	chr7	119885271	119886862	(39459111)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3735686
2283	13.4	0.6	0.8	chr7	119886865	119887226	(39458747)	C	THE1B	LTR/ERVL-MaLR	(2)	362	2	3735686
2437	10.6	0.0	0.0	chr7	120255795	120256106	(39089867)	C	AluSp	SINE/Alu	(1)	312	1	3736134
1635	15.9	15.4	2.2	chr7	120256107	120256239	(39089734)	+	MSTA	LTR/ERVL-MaLR	284	423	(5)	3736132
10638	13.7	0.9	1.3	chr7	120256245	120257875	(39088098)	+	MSTA-int	LTR/ERVL-MaLR	2	1625	(6)	3736132
2088	11.7	8.5	1.2	chr7	123215184	123215520	(36130453)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3740119
1276	12.1	32.2	3.1	chr7	123215521	123215802	(36130171)	+	THE1B-int	LTR/ERVL-MaLR	1	364	(0)	3740119
1322	24.4	3.0	6.1	chr7	123424124	123424499	(35921474)	C	MLT1A	LTR/ERVL-MaLR	(10)	364	1	3740413
710	18.6	11.9	0.0	chr7	123424500	123424639	(35921334)	C	MLT1A-int	LTR/ERVL-MaLR	(0)	1735	1577	3740413
15	9.7	0.0	0.0	chr7	123424676	123424697	(35921276)	+	(GT)n	Simple_repeat	1	22	(0)	3740414
30	8.2	4.5	1.4	chr7	123424729	123424794	(35921179)	+	(AGAT)n	Simple_repeat	1	69	(0)	3740415
4442	11.8	3.0	0.7	chr7	123424800	123425506	(35920467)	+	Tigger3	DNA/TcMar-Tigger	2255	2978	(51)	3740416
2690	17.9	2.8	0.2	chr7	124117767	124118696	(35227277)	+	L1MA9	LINE/L1	4831	5783	(508)	3741442
367	22.9	0.0	0.0	chr7	124118697	124118757	(35227216)	+	Tigger3c	DNA/TcMar-Tigger	1	61	(541)	3741443
14	15.9	0.0	0.0	chr7	124765942	124765969	(34580004)	+	(CCT)n	Simple_repeat	1	28	(0)	3742264
1541	19.2	8.7	0.3	chr7	125846893	125847206	(33498767)	+	MSTA	LTR/ERVL-MaLR	84	426	(2)	3743679
7373	19.0	4.3	0.8	chr7	125847207	125848624	(33497349)	+	MSTA-int	LTR/ERVL-MaLR	1	1470	(181)	3743679
9538	14.2	3.9	0.2	chr7	126275105	126276625	(33069348)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	2	3744220
2281	13.7	1.1	4.4	chr7	126276626	126277015	(33068958)	C	THE1D	LTR/ERVL-MaLR	(4)	377	1	3744220
1686	11.9	9.7	4.5	chr7	127129902	127130254	(32215719)	+	THE1C	LTR/ERVL-MaLR	2	374	(1)	3745326
2557	7.7	3.5	0.3	chr7	127130256	127130618	(32215355)	+	THE1C-int	LTR/ERVL-MaLR	1	375	(1256)	3745326
2096	12.9	0.0	0.0	chr7	128661128	128661407	(30684566)	C	AluSx1	SINE/Alu	(31)	281	2	3747741
2061	13.2	4.7	7.7	chr7	128661408	128661628	(30684345)	+	THE1B	LTR/ERVL-MaLR	153	364	(0)	3747739
11974	7.9	2.5	0.4	chr7	128661629	128663174	(30682799)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3747739
1677	18.1	1.0	2.7	chr7	129297740	129298038	(30047935)	+	AluJb	SINE/Alu	1	294	(18)	3748897
1823	15.0	5.0	0.6	chr7	129314401	129314728	(30031245)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	23	3748921
555	27.3	2.1	0.0	chr7	129314935	129315073	(30030900)	+	MIRb	SINE/MIR	117	258	(10)	3748922
12672	8.4	0.9	0.5	chr7	129660283	129661854	(29684119)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3749622
2310	13.1	3.3	3.6	chr7	129661855	129662219	(29683754)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3749622
2533	6.1	0.0	0.0	chr7	130833320	130833615	(28512358)	C	AluY	SINE/Alu	(14)	297	2	3751707
2153	11.3	6.8	1.4	chr7	131305907	131306266	(28039707)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3752589
11297	11.0	1.0	2.9	chr7	131306267	131307928	(28038045)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3752589
2288	10.4	6.0	0.0	chr7	132905264	132905608	(26440365)	+	L1PA11	LINE/L1	5808	6174	(0)	3755094
3241	7.3	5.4	0.2	chr7	135073532	135073970	(24272003)	C	LTR2	LTR/ERV1	(0)	463	1	3758439
256	31.5	2.4	4.1	chr7	135211094	135211262	(24134711)	+	MIR3	SINE/MIR	1	166	(42)	3758572
280	27.6	7.0	0.7	chr7	135558617	135558762	(23787211)	+	MER20B	DNA/hAT-Charlie	1	156	(627)	3759182
11259	10.2	1.8	0.1	chr7	137831667	137833220	(21512753)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3762462
2339	11.5	2.2	2.5	chr7	137833221	137833585	(21512388)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3762462
2092	8.9	0.4	0.0	chr7	137972179	137972437	(21373536)	+	AluSg	SINE/Alu	21	280	(30)	3762675
2018	26.6	9.5	7.4	chr7	138522854	138523473	(20822500)	+	L1MEg	LINE/L1	2897	3581	(2565)	3763795
14	14.0	4.9	2.3	chr7	138658815	138658855	(20687118)	+	(ATCTATAA)n	Simple_repeat	1	43	(0)	3764032
3173	11.2	7.4	5.3	chr7	138658911	138659210	(20686763)	+	MER4B	LTR/ERV1	33	364	(246)	3764033
12	22.0	4.8	4.5	chr7	143132118	143132180	(16213793)	+	(TGCTCC)n	Simple_repeat	1	66	(0)	3771439
1774	7.8	0.8	0.0	chr7	144573577	144573818	(14772155)	C	THE1C-int	LTR/ERVL-MaLR	(1335)	245	2	3773388
2062	12.8	5.1	1.1	chr7	144573824	144574179	(14771794)	C	THE1C	LTR/ERVL-MaLR	(4)	371	1	3773388
1913	16.6	5.0	1.1	chr7	144628219	144628584	(14717389)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3773463
9343	12.3	4.7	4.6	chr7	144628589	144630157	(14715816)	+	THE1D-int	LTR/ERVL-MaLR	9	1578	(2)	3773463
1989	12.8	8.0	1.2	chr7	144743639	144743977	(14601996)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3773623
567	11.3	12.6	0.0	chr7	144743978	144744074	(14601899)	+	THE1B-int	LTR/ERVL-MaLR	1	111	(1469)	3773623
406	12.3	9.5	0.0	chr7	144744072	144744145	(14601828)	+	THE1B-int	LTR/ERVL-MaLR	235	319	(1261)	3773623
2027	13.0	5.2	1.1	chr7	146258906	146259270	(13086703)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3775644
10718	13.2	0.6	0.4	chr7	146259271	146260898	(13085075)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3775644
296	33.6	9.0	2.9	chr7	148272169	148272407	(11073566)	+	L3	LINE/CR1	2773	3027	(1072)	3778502
448	32.6	5.3	2.2	chr7	148272437	148272709	(11073264)	+	CR1-3_Croc	LINE/CR1	2139	2420	(1185)	3778508
2773	18.1	3.5	0.6	chr7	148484267	148484771	(10861202)	C	MLT2B1	LTR/ERVL	(0)	520	1	3778848
442	24.6	0.3	10.9	chr7	149240439	149240632	(10105341)	+	MIR3	SINE/MIR	23	193	(15)	3780362
187	29.4	8.1	2.9	chr7	149240897	149240966	(10105007)	C	L2c	LINE/L2	(69)	3318	3245	3780363
183	31.4	0.0	9.7	chr7	149241132	149241151	(10104822)	C	X7B_LINE	LINE/CR1	(17)	250	231	3780364
981	10.9	0.7	0.0	chr7	149688653	149688790	(9657183)	C	MSTD	LTR/ERVL-MaLR	(257)	139	1	3781030
12	16.3	2.8	2.7	chr7	149689359	149689394	(9656579)	+	(TTCCACA)n	Simple_repeat	1	37	(0)	3781031
213	17.5	1.7	6.6	chr7	149714269	149714329	(9631644)	C	L2c	LINE/L2	(1)	3386	3329	3781083
16	13.4	0.0	2.9	chr7	149714673	149714707	(9631266)	+	G-rich	Low_complexity	1	35	(0)	3781084
1339	23.9	9.7	7.3	chr7	151402072	151402399	(7943574)	+	MLT1D	LTR/ERVL-MaLR	159	505	(0)	3783377
187	27.9	2.9	2.9	chr7	151402400	151402469	(7943504)	C	L2c	LINE/L2	(54)	3333	3264	3783379
2104	12.2	5.2	1.9	chr7	151971640	151972007	(7373966)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3784346
10030	9.3	10.7	1.6	chr7	151972008	151973174	(7372799)	+	THE1D-int	LTR/ERVL-MaLR	1	1321	(310)	3784346
940	20.1	9.0	12.2	chr7	155190200	155190567	(4155406)	+	MLT1B	LTR/ERVL-MaLR	1	355	(35)	3789326
1465	29.8	4.1	1.8	chr7	156450413	156450963	(2895010)	C	L1ME5	LINE/L1	(243)	5951	5388	3790914
2207	13.1	12.4	2.1	chr7	156628368	156628750	(2717223)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3791152
9799	16.8	1.5	1.1	chr7	156628751	156629407	(2716566)	+	MSTA-int	LTR/ERVL-MaLR	1	662	(969)	3791152
3401	20.3	8.2	7.6	chr7	158466073	158466758	(879215)	C	L1MA9	LINE/L1	(42)	6270	5552	3793272
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
10580	12.8	0.7	0.2	chr8	4029646	4031217	(141107419)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	3798859
2242	15.5	0.6	1.9	chr8	4031219	4031587	(141107049)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3798859
1589	22.3	11.1	0.0	chr8	4852199	4852575	(140286061)	+	MSTB	LTR/ERVL-MaLR	3	426	(0)	3799871
8098	20.2	1.8	1.2	chr8	4852576	4854215	(140284421)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	3799871
47	1.8	0.0	0.0	chr8	10666632	10666688	(134471948)	+	(GAAA)n	Simple_repeat	1	57	(0)	3808443
282	33.0	5.5	6.3	chr8	10666767	10667005	(134471631)	C	MLT1J-int	LTR/ERVL-MaLR	(1145)	242	6	3808439
383	32.7	10.7	8.5	chr8	10667011	10667502	(134471134)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	6	3808439
16	9.7	0.0	0.0	chr8	11681493	11681514	(133457122)	+	(G)n	Simple_repeat	1	22	(0)	3809994
10956	10.2	2.2	2.9	chr8	12554653	12556244	(132582392)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3811201
2163	14.1	4.7	2.0	chr8	12556245	12556598	(132582038)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3811201
1011	29.2	14.3	1.5	chr8	17401134	17401865	(127736771)	C	L2a	LINE/L2	(168)	3258	2415	3818123
1846	17.2	1.9	0.0	chr8	21541219	21541537	(123597099)	C	MSTB1-int	LTR/ERVL-MaLR	(1326)	325	1	3824603
2750	13.1	0.7	1.1	chr8	21541538	21541971	(123596665)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3824603
237	23.6	15.2	2.5	chr8	22849179	22849298	(122289338)	C	MIR	SINE/MIR	(51)	211	71	3826917
2508	18.4	6.3	1.5	chr8	29832192	29832722	(115305914)	C	MER74A	LTR/ERVL	(0)	558	1	3838571
7835	20.9	4.6	1.9	chr8	33294012	33295697	(111842939)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	2	3844208
1997	17.9	0.6	3.5	chr8	33295700	33296075	(111842561)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3844208
2631	9.8	2.1	0.5	chr8	33650873	33651241	(111487395)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3844993
10909	12.6	2.5	0.2	chr8	33651244	33652836	(111485800)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3844993
12168	19.4	6.0	3.9	chr8	37119717	37121802	(108016834)	+	L1MC3	LINE/L1	2474	4592	(1729)	3849850
2046	15.4	0.0	1.0	chr8	38280751	38281055	(106857581)	C	AluJo	SINE/Alu	(10)	302	1	3852024
1984	12.1	0.7	0.3	chr8	38446206	38446510	(106692126)	C	AluSx1	SINE/Alu	(6)	306	1	3852296
2178	12.6	4.6	1.1	chr8	39352328	39352687	(105785949)	+	THE1C	LTR/ERVL-MaLR	3	375	(0)	3853775
9062	13.3	7.9	1.8	chr8	39352690	39354214	(105784422)	+	THE1D-int	LTR/ERVL-MaLR	3	1627	(4)	3853776
11371	9.6	1.8	0.1	chr8	39422762	39424313	(105714323)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3853867
2819	5.7	0.6	0.3	chr8	39424314	39424667	(105713969)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3853867
20	0.0	2.9	5.7	chr8	41799163	41799196	(103339440)	+	(TTG)n	Simple_repeat	1	35	(0)	3857608
2122	9.4	2.5	0.4	chr8	42032872	42033172	(103105464)	C	AluSx1	SINE/Alu	(0)	312	1	3858007
192	25.5	0.0	2.1	chr8	42207789	42207836	(102930800)	C	L3	LINE/CR1	(1)	4098	4052	3858340
13	0.0	0.0	4.8	chr8	42672919	42672939	(102465697)	+	(TTA)n	Simple_repeat	1	21	(0)	3859258
1737	17.1	0.4	0.4	chr8	42672942	42673222	(102465414)	C	AluJr	SINE/Alu	(31)	281	1	3859259
12211	16.9	6.5	4.7	chr8	43109840	43110635	(102028001)	C	MER41-int	LTR/ERV1	(2286)	3660	3013	3860135
2035	9.8	1.7	2.4	chr8	43110636	43110931	(102027705)	+	AluSq2	SINE/Alu	1	294	(19)	3860136
1769	18.8	8.9	2.1	chr8	51873537	51873893	(93264743)	+	MSTA	LTR/ERVL-MaLR	1	394	(34)	3867358
32	0.0	5.4	0.0	chr8	51873894	51873930	(93264706)	+	(TTTCTT)n	Simple_repeat	1	39	(0)	3867359
1678	9.8	6.0	0.4	chr8	51873931	51874164	(93264472)	C	AluSc	SINE/Alu	(29)	280	33	3867360
259	35.2	3.9	0.0	chr8	52199202	52199323	(92939313)	+	MIRb	SINE/MIR	119	245	(23)	3867837
240	28.6	9.0	6.8	chr8	52519218	52519423	(92619213)	+	LTR33	LTR/ERVL	297	507	(8)	3868249
1351	19.7	14.6	1.4	chr8	52519476	52519881	(92618755)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	65	3868250
604	21.5	8.3	1.1	chr8	52519748	52519926	(92618710)	C	MLT2C1	LTR/ERVL	(204)	193	1	3868251
2548	9.9	0.3	0.0	chr8	53397072	53397375	(91741261)	+	AluY	SINE/Alu	2	306	(5)	3869438
4028	24.7	8.9	3.8	chr8	53397376	53397506	(91741130)	C	MLT1H-int	LTR/ERVL-MaLR	(1278)	131	2	3869437
260	24.0	0.9	13.3	chr8	53397509	53397628	(91741008)	C	MLT1H	LTR/ERVL-MaLR	(1)	568	464	3869437
396	18.9	10.9	0.9	chr8	53397629	53397735	(91740901)	+	L1MB4	LINE/L1	6062	6180	(0)	3869439
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
242	31.5	5.9	3.0	chr8	57693948	57694078	(87444558)	C	UCON26	Unknown	(85)	258	124	3875625
22	3.8	0.0	0.0	chr8	57694110	57694136	(87444500)	+	(AG)n	Simple_repeat	1	27	(0)	3875626
9556	9.7	0.3	0.3	chr8	58306759	58308102	(86830534)	C	THE1B-int	LTR/ERVL-MaLR	(236)	1344	1	3876410
2200	11.5	4.4	2.5	chr8	58308103	58308459	(86830177)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3876410
717	16.5	6.4	7.8	chr8	60119290	60119480	(85019156)	+	MER3	DNA/hAT-Charlie	22	209	(0)	3878700
460	28.1	13.2	7.6	chr8	61135315	61135734	(84002902)	+	MLT1K	LTR/ERVL-MaLR	146	592	(3)	3880231
733	24.7	1.6	2.6	chr8	61135968	61136158	(84002478)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3880232
2181	13.9	0.8	0.8	chr8	61324153	61324507	(83814129)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3880479
1611	8.1	0.8	0.0	chr8	61324508	61324742	(83813894)	+	THE1A-int	LTR/ERVL-MaLR	1	237	(1343)	3880479
777	8.6	0.0	0.0	chr8	61324748	61324852	(83813784)	C	L1PA13	LINE/L1	(544)	5630	5526	3880478
3688	25.5	6.7	3.7	chr8	61324866	61325195	(83813441)	C	MLT1H-int	LTR/ERVL-MaLR	(186)	1223	886	3880477
3243	18.2	4.4	1.0	chr8	61903932	61904618	(83234018)	C	MER67C	LTR/ERV1	(0)	711	1	3881267
1946	16.1	11.7	1.6	chr8	63380638	63381021	(81757615)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3883189
6233	16.1	5.6	3.0	chr8	63381024	63382155	(81756481)	+	MSTA-int	LTR/ERVL-MaLR	3	1165	(415)	3883189
2150	14.5	3.2	0.8	chr8	64730797	64731157	(80407479)	+	THE1C	LTR/ERVL-MaLR	1	370	(5)	3884847
8989	13.8	5.9	0.9	chr8	64731160	64732659	(80405977)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3884847
558	29.2	4.5	11.3	chr8	65903199	65903304	(79235332)	+	MIRb	SINE/MIR	8	113	(155)	3886582
2085	14.8	2.1	2.1	chr8	65903305	65903685	(79234951)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3886583
7288	16.7	6.6	14.5	chr8	65903686	65905489	(79233147)	+	THE1D-int	LTR/ERVL-MaLR	1	1651	(0)	3886583
1270	28.0	3.6	3.3	chr8	69329011	69329851	(75808785)	+	L1MD	LINE/L1	4973	5817	(425)	3891857
904	29.1	9.1	2.7	chr8	69921771	69922116	(75216520)	+	L2a	LINE/L2	2534	2896	(523)	3892831
12	16.4	2.8	2.7	chr8	70218005	70218077	(74920559)	+	(AGAGGAC)n	Simple_repeat	1	73	(0)	3893450
17	0.0	0.0	0.0	chr8	70218200	70218218	(74920418)	+	(T)n	Simple_repeat	1	19	(0)	3893451
414	20.8	0.0	0.0	chr8	70218523	70218599	(74920037)	+	AluJo	SINE/Alu	56	132	(180)	3893452
22598	11.0	2.0	2.0	chr8	70723948	70724828	(74413808)	C	L1PA8	LINE/L1	(0)	894	11	3894293
264	12.8	4.1	0.0	chr8	70724844	70724890	(74413746)	C	THE1C-int	LTR/ERVL-MaLR	(1531)	49	1	3894291
2076	14.1	3.5	1.6	chr8	70724891	70725258	(74413378)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3894291
834	20.5	0.0	1.2	chr8	73335316	73335481	(71803155)	C	FAM	SINE/Alu	(2)	183	20	3897800
2163	10.3	2.7	0.0	chr8	73335508	73335797	(71802839)	C	AluSx	SINE/Alu	(14)	298	1	3897801
1840	27.1	8.4	6.5	chr8	73440080	73441257	(71697379)	+	L2a	LINE/L2	2114	3304	(122)	3897989
2420	12.5	0.6	0.0	chr8	74654389	74654741	(70483895)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3899935
11452	10.1	0.7	0.5	chr8	74654742	74656318	(70482318)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3899935
522	34.2	9.3	3.5	chr8	75395907	75396300	(69742336)	C	MLT1I-int	LTR/ERVL-MaLR	(968)	419	1	3900894
485	30.2	4.5	3.5	chr8	75396301	75396499	(69742137)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	211	3900894
8378	20.0	1.3	0.5	chr8	76548866	76550500	(68588136)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	3	3902379
2036	21.3	5.2	0.5	chr8	76550503	76550908	(68587728)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3902379
803	28.8	3.8	4.2	chr8	77014211	77014471	(68124165)	C	MIR	SINE/MIR	(0)	262	3	3902952
270	33.4	6.4	4.1	chr8	78284194	78284544	(66854092)	C	MLT1I-int	LTR/ERVL-MaLR	(1031)	356	1	3904483
280	40.2	3.8	1.7	chr8	78284649	78284881	(66853755)	C	MLT1I	LTR/ERVL-MaLR	(111)	300	63	3904483
2245	12.7	4.7	1.4	chr8	79582707	79583074	(65555562)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3906189
8562	13.2	9.6	2.4	chr8	79583075	79584537	(65554099)	+	THE1D-int	LTR/ERVL-MaLR	1	1579	(1)	3906189
366	31.0	2.5	3.3	chr8	79652650	79652769	(65485867)	C	MIR	SINE/MIR	(0)	262	144	3906278
1803	17.2	0.7	0.7	chr8	80220585	80220881	(64917755)	C	AluJb	SINE/Alu	(15)	297	1	3907263
1970	25.5	2.3	5.3	chr8	80220882	80221105	(64917531)	C	L1MEc	LINE/L1	(3571)	2748	2524	3907259
2693	9.6	0.3	0.0	chr8	80944887	80945240	(64193396)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3908620
11765	9.8	0.3	0.1	chr8	80945241	80946817	(64191819)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3908620
2635	10.5	0.0	0.3	chr8	81018448	81018810	(64119826)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3908719
10585	10.9	4.0	0.4	chr8	81018811	81020333	(64118303)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3908719
2228	16.2	6.5	0.5	chr8	82116124	82116525	(63022111)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3910230
1082	14.9	2.7	0.0	chr8	82116526	82116706	(63021930)	+	MSTA-int	LTR/ERVL-MaLR	1	186	(1445)	3910230
1873	16.9	2.1	7.8	chr8	83465938	83466335	(61672301)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3911921
6474	15.8	1.7	3.1	chr8	83466338	83467447	(61671189)	+	THE1C-int	LTR/ERVL-MaLR	3	1096	(535)	3911921
10094	12.8	3.7	0.1	chr8	83921272	83922794	(61215842)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3912446
1855	17.1	3.6	3.9	chr8	83922796	83923159	(61215477)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	3912446
10208	11.2	4.2	1.0	chr8	84277445	84278973	(60859663)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3912948
1968	14.2	6.9	0.0	chr8	84278974	84279312	(60859324)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3912948
1110	13.8	0.6	0.0	chr8	84522861	84523027	(60615609)	C	THE1B	LTR/ERVL-MaLR	(0)	364	197	3913288
409	7.9	4.5	0.0	chr8	84523030	84523092	(60615544)	C	THE1B-int	LTR/ERVL-MaLR	(1514)	66	1	3913288
2233	11.3	2.7	5.3	chr8	84523093	84523466	(60615170)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3913288
11304	10.2	1.1	0.1	chr8	87784490	87786053	(57352583)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3917775
2194	11.6	5.0	2.0	chr8	87786054	87786406	(57352230)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3917775
4679	22.7	4.9	2.7	chr8	89746065	89748267	(55390369)	+	L1M2	LINE/L1	1452	3522	(3323)	3920192
2089	12.8	5.6	1.1	chr8	89807874	89808230	(55330406)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	3920295
10532	11.1	2.9	3.5	chr8	89808232	89809821	(55328815)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3920295
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
32	3.2	0.0	0.0	chr8	95269957	95269988	(49868648)	+	(GA)n	Simple_repeat	1	32	(0)	3928508
11	15.0	1.8	10.7	chr8	95329187	95329241	(49809395)	+	A-rich	Low_complexity	1	56	(0)	3928605
2368	20.7	6.6	0.2	chr8	95329278	95329799	(49808837)	+	MER89	LTR/ERV1	1	558	(1)	3928606
243	23.9	10.1	5.5	chr8	95465578	95465718	(49672918)	+	Charlie2b	DNA/hAT-Charlie	6	157	(2704)	3928823
353	13.0	0.0	0.0	chr8	96013127	96013180	(49125456)	+	MLT1C	LTR/ERVL-MaLR	414	467	(0)	3929616
1245	20.3	8.9	4.8	chr8	96013200	96013598	(49125038)	C	MLT1C	LTR/ERVL-MaLR	(43)	424	8	3929617
2211	11.4	5.3	1.2	chr8	96680282	96680627	(48458009)	+	THE1B	LTR/ERVL-MaLR	1	361	(3)	3930680
11196	10.5	2.3	0.0	chr8	96680632	96682175	(48456461)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3930680
4853	25.0	6.4	3.4	chr8	97236358	97237721	(47900915)	C	MLT1H1-int	LTR/ERVL-MaLR	(1)	1408	1	3931430
9710	16.5	3.2	0.6	chr8	97384065	97385465	(47753171)	C	MSTA-int	LTR/ERVL-MaLR	(208)	1443	1	3931638
2118	16.9	10.1	1.3	chr8	97385466	97385855	(47752781)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3931638
23968	9.5	1.5	1.9	chr8	97529889	97534484	(47604152)	+	L1PA7	LINE/L1	9	4563	(1898)	3931852
9267	16.4	2.9	1.9	chr8	97967264	97968897	(47169739)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	3932832
2445	15.9	2.6	1.4	chr8	97968898	97969318	(47169318)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3932832
12179	8.3	0.7	0.2	chr8	98319306	98320867	(46817769)	C	THE1B-int	LTR/ERVL-MaLR	(10)	1570	1	3933513
2395	14.7	3.0	1.4	chr8	98320868	98321225	(46817411)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3933513
7145	16.7	8.2	2.0	chr8	99025385	99026865	(46111771)	C	L1MA5	LINE/L1	(2313)	5249	3629	3934610
1760	14.9	6.8	2.5	chr8	100545241	100545604	(44593032)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3936978
11376	9.9	3.2	0.1	chr8	100545605	100547185	(44591451)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3936978
627	20.9	2.7	10.8	chr8	102059839	102059969	(43078667)	C	MER5A	DNA/hAT-Charlie	(2)	187	75	3939734
2460	9.3	0.0	0.3	chr8	102059970	102060280	(43078356)	C	AluSc8	SINE/Alu	(1)	310	1	3939735
821	34.6	10.8	3.5	chr8	103320011	103320850	(41817786)	C	L2b	LINE/L2	(1739)	1680	772	3942112
11744	9.0	0.6	0.5	chr8	103562120	103563698	(41574938)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3942503
2159	11.9	5.5	2.3	chr8	103563699	103564050	(41574586)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3942503
30	0.0	0.0	0.0	chr8	105318846	105318873	(39819763)	+	(GCG)n	Simple_repeat	1	28	(0)	3944980
16	29.0	0.0	0.0	chr8	105318884	105318937	(39819699)	+	(AGCCGC)n	Simple_repeat	1	54	(0)	3944981
1178	22.5	5.2	3.0	chr8	106457171	106457468	(38681168)	+	MSTD	LTR/ERVL-MaLR	92	396	(0)	3946561
6524	24.2	7.2	2.1	chr8	106457471	106459114	(38679522)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	3946561
1444	18.1	6.8	2.5	chr8	106933710	106934077	(38204559)	C	LTR52	LTR/ERVL	(36)	385	1	3947305
4992	25.8	3.0	2.3	chr8	106934078	106935289	(38203347)	C	LTR52-int	LTR/ERVL	(0)	3556	2337	3947305
2602	11.1	1.1	0.3	chr8	109681755	109682126	(35456510)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3951195
10154	10.9	4.5	3.8	chr8	109682127	109683694	(35454942)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3951195
2208	15.1	0.6	2.5	chr8	110170659	110171025	(34967611)	+	THE1B	LTR/ERVL-MaLR	3	362	(2)	3951806
9325	13.2	4.6	1.2	chr8	110171028	110172552	(34966084)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3951806
4849	23.1	10.8	10.3	chr8	112399555	112400091	(32738545)	C	MLT1A0-int	LTR/ERVL-MaLR	(1199)	536	3	3954749
1578	19.7	7.7	1.5	chr8	112400096	112400435	(32738201)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	1	3954749
1992	16.5	4.7	0.8	chr8	112414205	112414570	(32724066)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3954770
10039	12.4	3.3	0.9	chr8	112414571	112416108	(32722528)	+	THE1D-int	LTR/ERVL-MaLR	1	1576	(4)	3954770
10811	12.2	0.9	0.5	chr8	113702076	113703648	(31434988)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3956459
1846	19.8	2.8	1.7	chr8	113703649	113704008	(31434628)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3956459
4619	10.9	0.6	0.1	chr8	115308889	115309558	(29829078)	C	THE1A-int	LTR/ERVL-MaLR	(907)	673	1	3958521
2376	9.7	4.5	0.0	chr8	115309559	115309897	(29828739)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3958521
9566	12.1	6.2	0.5	chr8	116314639	116316127	(28822509)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3959868
2486	10.3	1.6	2.4	chr8	116316128	116316505	(28822131)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3959868
24	23.9	4.7	6.4	chr8	116720200	116720349	(28418287)	+	A-rich	Low_complexity	1	157	(0)	3960473
942	16.1	5.8	0.6	chr8	116720369	116720530	(28418106)	+	THE1B	LTR/ERVL-MaLR	194	364	(0)	3960474
10735	9.0	4.7	0.8	chr8	116720531	116722048	(28416588)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3960474
1963	10.9	5.0	3.0	chr8	118570749	118571079	(26567557)	+	THE1B	LTR/ERVL-MaLR	10	347	(17)	3963515
1288	9.2	3.5	0.0	chr8	118571145	118571340	(26567296)	+	THE1B-int	LTR/ERVL-MaLR	2	204	(1376)	3963515
7301	9.9	3.0	1.3	chr8	118571342	118572446	(26566190)	+	THE1B-int	LTR/ERVL-MaLR	454	1578	(2)	3963515
3234	28.5	11.4	4.7	chr8	120860794	120862724	(24275912)	C	L1PBa	LINE/L1	(4781)	2082	7	3967304
2104	15.5	1.9	2.5	chr8	122240111	122240474	(22898162)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3969567
11499	9.7	1.5	0.0	chr8	122240475	122242031	(22896605)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3969567
345	23.1	0.0	0.0	chr8	123158542	123158619	(21980017)	+	L1ME2z	LINE/L1	6360	6437	(7)	3971281
227	22.1	2.9	10.5	chr8	123690298	123690373	(21448263)	C	Charlie15a	DNA/hAT-Charlie	(50)	174	105	3972385
215	17.5	0.0	2.4	chr8	123690419	123690459	(21448177)	+	MER91C	DNA/hAT-Tip100	24	63	(77)	3972386
1871	31.3	6.5	3.7	chr8	125525669	125526471	(19612165)	C	HERV16-int	LTR/ERVL	(4169)	827	1	3975808
1455	25.9	6.0	4.7	chr8	125526472	125526913	(19611723)	C	LTR16	LTR/ERVL	(0)	456	1	3975808
2311	13.3	0.6	1.9	chr8	126039395	126039761	(19098875)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3976779
10677	9.6	6.5	0.3	chr8	126039764	126041244	(19097392)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3976779
2455	11.6	0.3	3.0	chr8	126676042	126676406	(18462230)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3977995
11542	9.6	0.9	0.2	chr8	126676407	126677975	(18460661)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3977995
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
1677	12.8	0.0	0.0	chr8	130548427	130548645	(14589991)	C	AluSx	SINE/Alu	(93)	219	1	3985310
2026	21.6	5.2	11.0	chr8	130548646	130548962	(14589674)	C	MLT1F2-int	LTR/ERVL-MaLR	(1161)	328	1	3985308
553	26.6	3.4	1.4	chr8	130548989	130549133	(14589503)	C	MLT1F2	LTR/ERVL-MaLR	(49)	511	364	3985308
1049	12.4	0.0	0.0	chr8	130549134	130549270	(14589366)	+	AluSz	SINE/Alu	1	137	(175)	3985311
12074	11.8	1.2	0.0	chr8	130706283	130707893	(14430743)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3985628
2284	15.0	11.4	0.8	chr8	130707894	130708275	(14430361)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3985628
2045	14.7	6.6	1.9	chr8	131008258	131008618	(14130018)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	3986173
2858	15.7	3.9	3.2	chr8	131008620	131009361	(14129275)	+	THE1D-int	LTR/ERVL-MaLR	2	894	(841)	3986173
2267	14.7	3.0	1.4	chr8	135011962	135012319	(10126317)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3993318
11852	10.2	0.2	0.0	chr8	135012320	135013896	(10124740)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3993318
9088	12.4	5.8	6.3	chr8	137386731	137388312	(7750324)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	1	3997095
2157	17.3	0.3	0.0	chr8	137388320	137388671	(7749965)	C	THE1B	LTR/ERVL-MaLR	(11)	353	1	3997095
311	22.2	0.0	2.4	chr8	137388693	137388775	(7749861)	+	L1MC4	LINE/L1	7960	8040	(2)	3997094
12020	9.3	0.5	0.0	chr8	138990168	138991740	(6146896)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3999720
2248	12.7	6.9	1.4	chr8	138991741	138992084	(6146552)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3999720
41	0.0	0.0	0.0	chr8	141986479	141986513	(3152123)	+	(TG)n	Simple_repeat	1	35	(0)	4004380
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
2319	9.0	1.9	1.3	chr8	143773024	143773333	(1365303)	+	AluSz	SINE/Alu	1	312	(0)	4006649
13	4.3	0.0	7.1	chr8	143773532	143773559	(1365077)	+	(CCCCA)n	Simple_repeat	1	28	(0)	4006650
13	11.4	10.5	0.0	chr8	143773560	143773568	(1365068)	+	(CCCACAC)n	Simple_repeat	2	42	(0)	4006651
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
983	19.0	4.8	0.0	chr8	144233153	144233368	(905268)	C	L1MB3	LINE/L1	(3)	6180	5954	4007362
1068	22.4	3.6	0.7	chr8	144233505	144233801	(904835)	C	L1MB3	LINE/L1	(183)	6000	5695	4007363
3802	19.5	6.3	3.1	chr8	144233789	144234002	(904634)	C	L1M4	LINE/L1	(1378)	4768	4562	4007364
1828	17.5	1.7	1.1	chr9	1903144	1903495	(136491222)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	4011386
11402	10.1	1.4	0.0	chr9	1903496	1905053	(136489664)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4011386
2395	9.4	0.0	0.3	chr9	2201084	2201393	(136193324)	C	AluSc8	SINE/Alu	(0)	311	2	4011796
10134	13.8	6.8	0.9	chr9	2201394	2201598	(136193119)	C	MSTA-int	LTR/ERVL-MaLR	(1421)	210	1	4011795
2250	14.0	13.1	0.5	chr9	2201599	2201972	(136192745)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4011795
8872	17.3	3.9	0.8	chr9	2591267	2592864	(135801853)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	4012337
1981	19.0	1.7	10.4	chr9	2592869	2593331	(135801386)	C	MSTB	LTR/ERVL-MaLR	(4)	422	1	4012337
1142	33.4	7.6	5.5	chr9	10226097	10226692	(128168025)	C	MER45C	DNA/hAT-Tip100	(343)	610	2	4023472
2084	16.9	1.1	1.4	chr9	13834004	13834368	(124560349)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4028155
10398	11.0	2.9	2.9	chr9	13834369	13835947	(124558770)	+	THE1B-int	LTR/ERVL-MaLR	1	1579	(1)	4028155
3900	17.4	6.2	6.7	chr9	18534602	18535588	(119859129)	C	THE1C-int	LTR/ERVL-MaLR	(598)	982	1	4034805
1920	16.3	3.5	2.7	chr9	18535589	18535960	(119858757)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4034805
770	19.8	1.1	4.4	chr9	20253526	20253705	(118141012)	+	MER5B	DNA/hAT-Charlie	5	178	(0)	4037618
334	19.7	0.0	0.0	chr9	20254335	20254395	(118140322)	C	L2b	LINE/L2	(8)	3367	3307	4037619
10191	11.2	2.6	3.5	chr9	22996563	22998156	(115396561)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4041258
2440	12.2	0.8	0.3	chr9	22998157	22998518	(115396199)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4041258
1649	16.7	0.7	1.8	chr9	30513033	30513313	(107881404)	+	MSTB	LTR/ERVL-MaLR	1	278	(148)	4051276
8049	21.3	2.2	1.6	chr9	30513368	30513671	(107881046)	+	MSTB-int	LTR/ERVL-MaLR	1	309	(1342)	4051277
1681	18.4	11.9	0.5	chr9	30513672	30514049	(107880668)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	4051278
2472	5.3	1.6	0.3	chr9	33076868	33077171	(105317546)	+	AluSp	SINE/Alu	2	309	(4)	4054715
215	35.3	9.3	0.0	chr9	34603996	34604131	(103790586)	C	L2c	LINE/L2	(318)	3069	2920	4057668
2435	9.7	0.6	0.0	chr9	34604162	34604472	(103790245)	+	AluSp	SINE/Alu	1	313	(0)	4057669
1864	12.4	9.3	0.0	chr9	34639295	34639576	(103755141)	+	AluJb	SINE/Alu	1	311	(1)	4057715
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
556	20.2	1.8	9.8	chr9	62864476	62864711	(75530006)	C	MER52A	LTR/ERV1	(1538)	217	1	4073744
1381	16.6	4.3	4.0	chr9	62864713	62865033	(75529684)	+	LTR8	LTR/ERV1	365	686	(5)	4073745
2007	14.1	8.4	1.5	chr9	63257865	63258206	(75136511)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4074120
7827	15.8	2.7	3.3	chr9	63258209	63258612	(75136105)	+	THE1B-int	LTR/ERVL-MaLR	3	424	(1227)	4074120
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
7578	14.3	3.8	1.6	chr9	66897408	66898463	(71496254)	+	L1MCb	LINE/L1	4273	5343	(1221)	4078002
410	8.1	3.1	0.0	chr9	66898484	66898545	(71496172)	C	MSTA-int	LTR/ERVL-MaLR	(1562)	69	6	4078005
1776	14.8	16.4	1.1	chr9	66898550	66898911	(71495806)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4078005
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
1949	12.9	1.8	2.1	chr9	71348539	71348870	(67045847)	C	AluSx1	SINE/Alu	(0)	312	1	4084528
1762	8.0	3.6	0.5	chr9	76571733	76572034	(61822683)	+	LSU-rRNA_Hsa	rRNA	4695	5034	(1)	4092814
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
24	21.3	2.5	3.6	chr9	78032030	78032043	(60362674)	+	G-rich	Low_complexity	3	83	(0)	4095149
466	23.8	14.3	1.6	chr9	78367485	78367672	(60027045)	+	MIRc	SINE/MIR	36	251	(17)	4095661
535	25.9	9.7	0.0	chr9	78367746	78367903	(60026814)	C	MER96	DNA/hAT-Tip100	(0)	175	1	4095662
2074	13.4	0.3	1.3	chr9	78368031	78368337	(60026380)	C	AluSx	SINE/Alu	(8)	304	1	4095663
2111	15.8	1.6	1.1	chr9	78948904	78949274	(59445443)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	4096491
9379	13.2	5.6	0.7	chr9	78949277	78950778	(59443939)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4096491
11390	11.1	0.4	0.1	chr9	79088327	79089900	(59304817)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	1	4096710
181	28.6	6.1	8.3	chr9	79577807	79577890	(58816827)	C	MamRTE1	LINE/RTE-BovB	(1954)	1858	1777	4097451
1908	22.9	4.7	4.4	chr9	80468434	80469094	(57925623)	C	L1MA9	LINE/L1	(38)	6274	5651	4098630
2588	11.2	0.0	1.3	chr9	80593229	80593608	(57801109)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4098782
9604	11.8	4.8	4.3	chr9	80593609	80595179	(57799538)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4098782
11335	10.7	0.2	1.1	chr9	80969913	80971507	(57423210)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4099238
1982	25.8	1.9	0.0	chr9	82783449	82783928	(55610789)	C	MLT1D-int	LTR/ERVL-MaLR	(1000)	489	1	4101924
1333	22.2	15.1	4.5	chr9	82783929	82784371	(55610346)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	8	4101924
9268	17.3	2.2	3.1	chr9	83319972	83321899	(55072818)	C	L1M2a1	LINE/L1	(1808)	5304	3394	4102687
6064	17.5	4.3	0.3	chr9	83321899	83322948	(55071769)	C	L1M2a1	LINE/L1	(6019)	1097	4	4102687
2326	10.2	0.7	0.0	chr9	83710793	83711087	(54683630)	C	AluSx	SINE/Alu	(15)	297	1	4103358
400	33.2	11.5	4.2	chr9	83711397	83711981	(54682736)	+	L2c	LINE/L2	2670	3331	(56)	4103359
1720	15.5	2.8	3.8	chr9	84510462	84510751	(53883966)	C	AluJr	SINE/Alu	(25)	287	1	4104845
302	23.5	16.9	12.6	chr9	84510752	84510880	(53883837)	C	L1ME1	LINE/L1	(67)	6112	5949	4104843
255	29.5	8.7	0.0	chr9	84510885	84510979	(53883738)	+	LTR33B	LTR/ERVL	400	503	(0)	4104841
2493	13.0	2.8	0.3	chr9	88000799	88001153	(50393564)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4110289
12117	8.8	0.8	0.3	chr9	88001154	88002725	(50391992)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4110289
395	30.8	1.5	0.0	chr9	89856458	89856587	(48538130)	+	L1MB3	LINE/L1	101	232	(6375)	4113062
4203	6.3	0.4	0.0	chr9	90739744	90740254	(47654463)	C	MER9a2	LTR/ERVK	(0)	513	1	4114243
7745	13.2	3.5	1.1	chr9	90740255	90740450	(47654267)	C	THE1C-int	LTR/ERVL-MaLR	(1382)	198	1	4114242
1854	17.0	4.5	3.0	chr9	90740451	90740819	(47653898)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4114242
29243	9.3	1.5	1.2	chr9	90755224	90759266	(47635451)	C	HERVE-int	LTR/ERV1	(2649)	5164	1108	4114264
5449	21.7	1.8	10.2	chr9	92118872	92120370	(46274347)	C	MLT1C-int	LTR/ERVL-MaLR	(0)	1371	1	4116223
1251	22.6	8.0	4.5	chr9	92120371	92120783	(46273934)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	36	4116223
528	21.1	3.1	3.9	chr9	92892121	92892248	(45502469)	+	THE1D-int	LTR/ERVL-MaLR	1110	1236	(395)	4117372
317	10.2	2.0	0.0	chr9	92892237	92892285	(45502432)	C	MSTA-int	LTR/ERVL-MaLR	(616)	1015	966	4117370
399	28.0	0.8	6.7	chr9	92892301	92892434	(45502283)	C	MSTA	LTR/ERVL-MaLR	(302)	126	1	4117374
1281	15.8	4.0	1.6	chr9	92892435	92892679	(45502038)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1401	4117374
23653	11.7	2.3	1.2	chr9	93782279	93789910	(44604807)	C	L1MA2	LINE/L1	(0)	7723	1	4118566
1905	27.7	9.9	9.9	chr9	93821720	93823108	(44571609)	C	L1MC4	LINE/L1	(1)	8041	6653	4118610
11602	8.2	0.8	0.8	chr9	93971301	93972879	(44421838)	C	THE1A-int	LTR/ERVL-MaLR	(1)	1579	1	4118842
2652	8.2	0.0	0.0	chr9	93972880	93973234	(44421483)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4118842
3028	21.5	8.6	8.4	chr9	95655095	95655496	(42739221)	+	BLACKJACK	DNA/hAT-Blackjack	2513	2911	(58)	4121536
13	6.8	0.0	12.5	chr9	95655814	95655853	(42738864)	+	GA-rich	Low_complexity	1	40	(0)	4121540
2276	10.4	7.7	0.9	chr9	97778552	97778900	(40615817)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4125118
6614	11.7	6.4	0.2	chr9	97778901	97779278	(40615439)	+	THE1C-int	LTR/ERVL-MaLR	1	433	(1147)	4125118
210	30.5	19.3	0.0	chr9	98185692	98185858	(40208859)	C	MIRb	SINE/MIR	(13)	255	49	4126014
247	27.6	2.6	2.6	chr9	98186182	98186259	(40208458)	+	MIR3	SINE/MIR	67	144	(64)	4126015
366	25.7	0.0	0.0	chr9	98186414	98186487	(40208230)	+	MIRc	SINE/MIR	86	159	(109)	4126016
2218	14.2	3.0	1.7	chr9	102416074	102416430	(35978287)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	4133021
11044	10.0	2.1	0.1	chr9	102416433	102417981	(35976736)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4133021
9808	13.9	5.6	0.2	chr9	103209284	103210826	(35183891)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	4134052
1647	15.9	16.1	1.6	chr9	103210827	103211191	(35183526)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4134052
646	9.0	0.0	0.0	chr9	105558488	105558565	(32836152)	C	AluSx	SINE/Alu	(234)	78	1	4137705
216	33.0	3.3	3.3	chr9	105558587	105558677	(32836040)	+	MIR3	SINE/MIR	87	177	(31)	4137706
431	29.9	5.7	0.0	chr9	106470263	106470429	(31924288)	C	MER5B	DNA/hAT-Charlie	(1)	177	1	4139060
1865	14.9	14.0	2.1	chr9	106470479	106470854	(31923863)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4139061
3024	8.9	2.2	0.0	chr9	106470855	106471304	(31923413)	+	MSTA-int	LTR/ERVL-MaLR	1	460	(1171)	4139061
6856	7.3	0.8	0.8	chr9	107518957	107520322	(30874395)	C	L1PA7	LINE/L1	(2)	6152	4790	4140914
17	15.0	7.0	4.9	chr9	107520537	107520550	(30874167)	+	(AT)n	Simple_repeat	1	13	(0)	4140915
831	15.2	0.0	0.0	chr9	107520551	107520668	(30874049)	+	FLAM_C	SINE/Alu	2	119	(24)	4140916
11008	11.6	2.0	2.7	chr9	107772481	107774124	(30620593)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	4141555
2229	13.2	11.7	0.8	chr9	107774125	107774505	(30620212)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4141555
213	29.7	1.1	8.1	chr9	108125051	108125149	(30269568)	+	L2c	LINE/L2	3258	3349	(38)	4142229
280	28.6	11.0	0.9	chr9	109143976	109144081	(29250636)	C	L4_A_Mam	LINE/RTE-X	(2598)	2392	2275	4143884
2111	11.8	2.7	0.0	chr9	109144376	109144664	(29250053)	C	AluSx1	SINE/Alu	(15)	297	1	4143885
2022	10.7	0.7	6.4	chr9	110297423	110297749	(28096968)	C	AluSq	SINE/Alu	(5)	308	1	4146050
6369	6.8	0.7	0.0	chr9	111091247	111092086	(27302631)	+	HERVL-int	LTR/ERVL	1	846	(4808)	4147285
2826	7.9	0.0	0.0	chr9	111092106	111092460	(27302257)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4147286
1088	26.5	12.2	0.3	chr9	111165810	111166169	(27228548)	+	L1M3c	LINE/L1	1	409	(6759)	4147421
1702	32.1	6.9	3.0	chr9	111166255	111167134	(27227583)	+	L1M3c	LINE/L1	1092	2008	(5160)	4147421
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
11125	8.7	1.5	8.0	chr9	114601322	114602006	(23792711)	C	THE1A-int	LTR/ERVL-MaLR	(964)	616	1	4154023
2747	6.9	1.7	0.3	chr9	114602007	114602356	(23792361)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4154023
13	15.5	5.6	0.0	chr9	117951680	117951715	(20443002)	+	(CTCCTC)n	Simple_repeat	1	38	(0)	4160374
191	37.7	1.3	0.0	chr9	117951800	117951876	(20442841)	C	L3	LINE/CR1	(90)	4009	3932	4160375
284	33.3	0.8	6.8	chr9	118645587	118645718	(19748999)	C	L2c	LINE/L2	(183)	3204	3081	4161549
32	11.7	0.0	0.0	chr9	118645737	118645784	(19748933)	+	(GA)n	Simple_repeat	1	48	(0)	4161550
960	27.1	3.6	6.5	chr9	118645856	118646222	(19748495)	+	MLT1A	LTR/ERVL-MaLR	19	374	(0)	4161551
6150	25.7	3.6	6.8	chr9	118646225	118648014	(19746703)	+	MLT1A-int	LTR/ERVL-MaLR	2	1731	(4)	4161551
2326	11.9	0.0	0.3	chr9	119908563	119908864	(18485853)	C	AluSq	SINE/Alu	(2)	311	11	4163930
544	32.6	6.1	9.6	chr9	120768087	120768480	(17626237)	+	L2b	LINE/L2	2992	3370	(5)	4165665
11930	8.4	1.2	1.9	chr9	125353124	125353535	(13041182)	C	THE1B-int	LTR/ERVL-MaLR	(1156)	424	1	4174497
1820	12.8	11.8	2.7	chr9	125353536	125353865	(13040852)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4174497
2268	9.2	1.0	0.0	chr9	127182437	127182728	(11211989)	C	AluSx1	SINE/Alu	(17)	295	1	4177763
719	12.6	5.3	11.7	chr9	127182729	127182798	(11211919)	+	MSTB	LTR/ERVL-MaLR	362	425	(1)	4177761
2387	13.2	7.3	2.7	chr9	127182829	127183234	(11211483)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4177764
343	31.5	2.3	0.0	chr9	128135704	128135833	(10258884)	C	L1MB4	LINE/L1	(6366)	241	109	4179823
1435	15.7	7.4	5.5	chr9	128159643	128159935	(10234782)	+	AluJb	SINE/Alu	1	299	(13)	4179863
16	25.9	1.6	3.1	chr9	128160164	128160226	(10234491)	+	G-rich	Low_complexity	1	64	(0)	4179864
1614	15.4	0.0	8.8	chr9	133185691	133186008	(5208709)	+	AluJb	SINE/Alu	2	291	(21)	4190207
841	23.7	3.2	0.0	chr9	133186009	133186209	(5208508)	+	L1MB5	LINE/L1	5775	5981	(193)	4190203
503	25.3	3.5	5.0	chr9	133186249	133186418	(5208299)	+	L1MB5	LINE/L1	5977	6143	(31)	4190203
2094	7.9	1.0	0.7	chr9	133186419	133186709	(5208008)	+	AluSg	SINE/Alu	1	292	(18)	4190208
15	13.2	3.0	0.0	chr9	133978129	133978161	(4416556)	+	G-rich	Low_complexity	1	34	(0)	4191346
333	31.9	6.0	3.4	chr9	134895807	134895952	(3498765)	+	MLT1J2	LTR/ERVL-MaLR	279	428	(20)	4192514
1064	26.6	9.6	3.9	chr9	134997752	134998185	(3396532)	+	MLT1D	LTR/ERVL-MaLR	3	463	(42)	4192636
1639	19.0	11.3	0.0	chr9	134998371	134998701	(3396016)	+	MER83C	LTR/ERV1	1	373	(0)	4192637
210	28.4	12.1	0.0	chr9	136887509	136887624	(1507093)	C	L2	LINE/L2	(1275)	2144	2013	4194944
670	24.7	3.4	0.5	chr9	137346609	137346807	(1047910)	C	MLT1E2-int	LTR/ERVL-MaLR	(1166)	205	1	4195523
2339	6.2	0.0	1.0	chr9	137346812	137347099	(1047618)	C	AluSg7	SINE/Alu	(10)	299	15	4195526
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1984	22.0	6.5	1.6	chr9	137981779	137982055	(412662)	C	MLT1F2-int	LTR/ERVL-MaLR	(1192)	297	1	4196399
1684	22.5	9.5	5.1	chr9	137982056	137982589	(412128)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	4196399
288	32.3	0.0	0.3	chrX	2895067	2895163	(153145732)	+	MIR	SINE/MIR	170	265	(3)	4363787
2074	16.1	0.3	0.0	chrX	2895354	2895664	(153145231)	+	AluJb	SINE/Alu	1	312	(0)	4363788
2359	13.5	6.4	6.7	chrX	6692768	6693358	(149347537)	C	MER4B	LTR/ERV1	(0)	900	26	4370568
42	0.0	0.0	0.0	chrX	13161351	13161386	(142879509)	+	(AC)n	Simple_repeat	1	36	(0)	4380718
4073	15.3	10.1	2.9	chrX	13161390	13161446	(142879449)	C	MER21B	LTR/ERVL	(18)	850	790	4380719
54	0.0	0.0	0.0	chrX	13161447	13161492	(142879403)	+	(TG)n	Simple_repeat	1	46	(0)	4380720
4073	15.3	10.1	2.9	chrX	13161493	13162221	(142878674)	C	MER21B	LTR/ERVL	(79)	789	1	4380719
262	24.1	8.0	4.7	chrX	16505860	16505996	(139534899)	C	MIR	SINE/MIR	(35)	233	87	4386119
1977	23.8	3.9	2.1	chrX	16506196	16506672	(139534223)	+	LTR16C	LTR/ERVL	2	487	(2)	4386120
1089	24.6	23.7	2.4	chrX	19681421	19682238	(136358657)	C	L2a	LINE/L2	(2)	3424	2341	4391774
2209	12.0	3.7	1.3	chrX	20541239	20541610	(135499285)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4393340
11095	12.2	1.9	0.1	chrX	20541613	20543212	(135497683)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	4393340
237	30.5	4.4	5.1	chrX	21947306	21947443	(134093452)	+	MER5A	DNA/hAT-Charlie	48	184	(5)	4395216
1557	18.2	0.7	0.7	chrX	24002649	24002917	(132037978)	C	AluJb	SINE/Alu	(33)	279	11	4398566
494	26.4	6.0	3.1	chrX	24412338	24412532	(131628363)	C	Charlie7	DNA/hAT-Charlie	(2410)	202	2	4399462
522	26.6	11.9	0.9	chrX	24828214	24828429	(131212466)	C	MIR	SINE/MIR	(17)	245	3	4400213
12	17.4	0.0	5.6	chrX	25015790	25015825	(131025070)	+	(GGTG)n	Simple_repeat	1	36	(0)	4400470
14	19.8	0.0	7.4	chrX	25015887	25015940	(131024955)	+	(TGCCCGC)n	Simple_repeat	1	54	(0)	4400471
2299	11.2	4.2	1.1	chrX	25134565	25134933	(130905962)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4400675
2775	8.0	0.3	0.0	chrX	25134945	25135319	(130905576)	+	THE1D-int	LTR/ERVL-MaLR	1142	1517	(63)	4400675
11785	9.1	0.2	0.2	chrX	28796248	28797826	(127243069)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4405762
2119	14.2	3.6	2.2	chrX	28797827	28798185	(127242710)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4405762
2281	15.4	6.6	2.7	chrX	31105987	31106394	(124934501)	+	MSTB2	LTR/ERVL-MaLR	4	428	(0)	4409288
5853	20.3	9.4	9.5	chrX	31106395	31106543	(124934352)	+	MSTB2-int	LTR/ERVL-MaLR	1	102	(1549)	4409288
2131	11.6	11.6	1.5	chrX	31106544	31106885	(124934010)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4409289
1732	13.0	3.7	2.6	chrX	35010713	35010980	(121029915)	C	THE1B	LTR/ERVL-MaLR	(93)	271	1	4414538
22	21.1	5.9	0.0	chrX	35010990	35011057	(121029838)	+	GA-rich	Low_complexity	1	72	(0)	4414539
1391	20.0	1.0	1.6	chrX	35011128	35011674	(121029221)	+	L1PA13	LINE/L1	2045	2657	(4908)	4414540
7990	17.3	10.2	3.5	chrX	37370366	37371999	(118668896)	+	MER52A	LTR/ERV1	1	1755	(0)	4417315
471	34.1	2.6	9.3	chrX	39456643	39457052	(116583843)	+	L3	LINE/CR1	2682	3063	(1036)	4420568
1038	26.0	12.4	2.2	chrX	39457102	39457470	(116583425)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	37	4420569
22	7.4	0.0	0.0	chrX	39509307	39509335	(116531560)	+	(T)n	Simple_repeat	1	29	(0)	4420652
1181	25.8	7.2	9.3	chrX	39509460	39509899	(116530996)	C	MLT1H2	LTR/ERVL-MaLR	(16)	473	44	4420653
2026	14.0	1.3	0.3	chrX	41096433	41096739	(114944156)	C	AluSx1	SINE/Alu	(2)	310	1	4423665
185	23.1	13.6	12.3	chrX	41096740	41096841	(114944054)	+	MIR3	SINE/MIR	52	159	(49)	4423664
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
2024	15.8	6.1	8.3	chrX	44543240	44543623	(111497272)	+	MER31B	LTR/ERV1	1	381	(85)	4429098
1812	15.8	0.3	0.7	chrX	44543624	44543915	(111496980)	C	AluJo	SINE/Alu	(20)	292	2	4429099
4106	20.6	5.9	4.0	chrX	46350566	46351552	(109689343)	C	MLT1A0-int	LTR/ERVL-MaLR	(725)	1010	5	4431996
2834	16.6	0.2	11.6	chrX	46351557	46351619	(109689276)	C	MLT2B1	LTR/ERVL	(0)	520	466	4431997
1599	17.9	3.8	2.8	chrX	46351620	46351904	(109688991)	C	AluJb	SINE/Alu	(23)	289	2	4431998
2834	16.6	0.2	11.6	chrX	46351905	46352427	(109688468)	C	MLT2B1	LTR/ERVL	(55)	465	1	4431997
2570	9.8	1.6	4.2	chrX	46478421	46478805	(109562090)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4432204
2432	7.1	1.6	14.1	chrX	46478808	46479144	(109561751)	+	THE1C-int	LTR/ERVL-MaLR	3	290	(1341)	4432204
11259	9.1	4.0	0.1	chrX	48852176	48853692	(107187203)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	4436976
3667	6.5	3.0	0.0	chrX	48853724	48854172	(107186723)	+	LTR2	LTR/ERV1	1	463	(0)	4436977
24720	16.2	0.6	2.5	chrX	49139967	49144004	(106896891)	C	HERVE-int	LTR/ERV1	(2)	7811	3832	4437605
2476	7.0	0.0	0.3	chrX	49144005	49144306	(106896589)	C	AluY	SINE/Alu	(9)	302	2	4437606
2156	19.1	5.6	5.2	chrX	51233912	51234409	(104806486)	+	MLT1D	LTR/ERVL-MaLR	5	504	(1)	4440400
703	12.0	3.1	1.6	chrX	51234411	51234537	(104806358)	+	MLT1D-int	LTR/ERVL-MaLR	1	129	(1242)	4440400
368	25.3	1.0	0.0	chrX	51234542	51234631	(104806264)	+	MLT1D-int	LTR/ERVL-MaLR	1380	1470	(19)	4440401
1853	18.6	7.9	5.0	chrX	51234632	51235049	(104805846)	+	MLT1D	LTR/ERVL-MaLR	1	431	(74)	4440401
262	22.0	0.0	0.0	chrX	54807589	54807638	(101233257)	+	MIRb	SINE/MIR	10	59	(209)	4446410
19	25.4	5.3	0.0	chrX	54808161	54808235	(101232660)	+	(AGTAGGA)n	Simple_repeat	1	79	(0)	4446411
14	27.3	5.3	1.2	chrX	54808223	54808298	(101232597)	+	G-rich	Low_complexity	1	80	(0)	4446412
1379	23.3	6.2	2.0	chrX	56737762	56738208	(99302687)	C	L1MA1	LINE/L1	(0)	8042	7576	4448475
267	15.5	0.0	17.4	chrX	56738209	56738294	(99302601)	C	MER21A	LTR/ERVL	(0)	938	868	4448476
2983	18.6	6.8	13.1	chrX	56738288	56739214	(99301681)	C	MER21A	LTR/ERVL	(27)	904	82	4448476
6236	24.0	5.7	2.1	chrX	62833373	62834956	(93205939)	C	MSTB1-int	LTR/ERVL-MaLR	(7)	1644	1	4449710
1436	19.3	16.0	2.4	chrX	62834957	62835156	(93205739)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	205	4449710
36	2.9	0.0	0.0	chrX	62835157	62835191	(93205704)	+	(GA)n	Simple_repeat	1	35	(0)	4449711
1436	19.3	16.0	2.4	chrX	62835192	62835362	(93205533)	C	MSTB1	LTR/ERVL-MaLR	(228)	204	2	4449710
10577	12.8	0.2	1.3	chrX	62973616	62975213	(93065682)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4449811
1860	14.8	7.4	2.0	chrX	62975214	62975557	(93065338)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4449811
1610	26.0	8.7	0.2	chrX	63343009	63343525	(92697370)	+	L1M4c	LINE/L1	8	572	(6035)	4450070
1620	18.5	3.0	4.6	chrX	63768591	63768958	(92271937)	+	THE1D	LTR/ERVL-MaLR	3	364	(0)	4450555
10123	14.6	0.8	5.0	chrX	63768959	63770608	(92270287)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	4450555
2564	11.9	5.2	0.5	chrX	64626166	64626542	(91414353)	+	MLT2A1	LTR/ERVL	1	385	(59)	4451564
49	0.0	0.0	0.0	chrX	64626543	64626584	(91414311)	+	(GT)n	Simple_repeat	1	42	(0)	4451565
2564	11.9	5.2	0.5	chrX	64626585	64626629	(91414266)	+	MLT2A1	LTR/ERVL	386	443	(1)	4451564
35681	9.2	1.5	0.9	chrX	64626630	64631703	(91409192)	+	HERVL-int	LTR/ERVL	1	5104	(550)	4451564
1997	12.2	6.9	2.2	chrX	65900487	65900847	(90140048)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	4453047
884	13.4	1.2	0.0	chrX	65900849	65901005	(90139890)	+	THE1D-int	LTR/ERVL-MaLR	3	161	(1470)	4453047
931	36.9	7.2	0.9	chrX	65901059	65901670	(90139225)	C	L2b	LINE/L2	(243)	3132	2479	4453048
2144	20.5	1.0	1.2	chrX	66406898	66407380	(89633515)	C	MSTB-int	LTR/ERVL-MaLR	(1168)	483	2	4453669
2087	19.1	5.4	1.2	chrX	66407382	66407789	(89633106)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4453669
11	29.7	1.6	3.2	chrX	69285842	69285902	(86754993)	+	A-rich	Low_complexity	1	62	(0)	4457939
2260	10.8	0.7	2.2	chrX	70122067	70122380	(85918515)	+	AluSq2	SINE/Alu	2	310	(3)	4459147
48	3.5	3.4	0.0	chrX	70122389	70122447	(85918448)	+	(CTCTCC)n	Simple_repeat	1	61	(0)	4459148
10304	4.1	0.7	8.0	chrX	70122448	70123902	(85916993)	+	SVA_B	Retroposon/SVA	35	1383	(0)	4459149
3984	16.5	2.6	5.0	chrX	72689159	72690323	(83350572)	C	L1MB8	LINE/L1	(1)	7038	5893	4463737
1745	14.4	6.5	4.7	chrX	72690324	72690688	(83350207)	+	MLT1B	LTR/ERVL-MaLR	1	372	(18)	4463738
10022	16.6	4.9	1.5	chrX	72690697	72690762	(83350133)	C	L1MB8	LINE/L1	(1110)	5896	5854	4463737
484	24.0	10.4	7.5	chrX	73521368	73521673	(82519222)	+	L1MC5	LINE/L1	8954	9269	(35)	4464551
2170	20.7	1.4	0.5	chrX	73521674	73522095	(82518800)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	4464552
2176	16.4	0.5	0.0	chrX	73522097	73522467	(82518428)	+	MSTB-int	LTR/ERVL-MaLR	2	374	(1277)	4464552
9569	12.5	6.2	3.9	chrX	73905284	73906794	(82134101)	+	THE1B-int	LTR/ERVL-MaLR	3	1550	(81)	4464895
9692	15.2	1.5	1.4	chrX	76878331	76879955	(79160940)	C	THE1D-int	LTR/ERVL-MaLR	(4)	1627	1	4467824
286	8.5	0.0	4.1	chrX	76879956	76880004	(79160891)	C	THE1D	LTR/ERVL-MaLR	(0)	381	335	4467824
15353	9.8	0.1	0.1	chrX	76880007	76882207	(79158688)	+	L1P2	LINE/L1	7	2205	(3979)	4467825
9668	12.8	3.2	6.0	chrX	77023898	77025522	(79015373)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	2	4467943
2306	14.1	1.3	1.1	chrX	77025524	77025897	(79014998)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4467943
2179	12.9	2.2	4.0	chrX	78146963	78147333	(77893562)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4469570
11867	9.0	0.5	0.0	chrX	78147335	78148906	(77891989)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	4469570
11072	11.0	1.6	0.2	chrX	78538425	78539982	(77500913)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4469911
2156	13.8	2.2	2.7	chrX	78539983	78540348	(77500547)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4469911
1431	11.3	3.5	5.5	chrX	81295575	81295635	(74745260)	C	MER30	DNA/hAT-Charlie	(169)	61	2	4472726
2046	14.4	4.0	0.0	chrX	81295636	81295974	(74744921)	C	MSTA-int	LTR/ERVL-MaLR	(1277)	354	2	4472725
1581	18.1	16.1	0.6	chrX	81295976	81296336	(74744559)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4472725
2269	16.3	0.6	0.8	chrX	81728422	81728786	(74312109)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4473148
9994	14.2	1.3	2.6	chrX	81728788	81730388	(74310507)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	4473148
2621	23.9	9.8	2.0	chrX	82160388	82160981	(73879914)	C	Tigger6a	DNA/TcMar-Tigger	(437)	646	1	4473616
1713	18.2	12.6	0.5	chrX	82160983	82161358	(73879537)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4473618
9858	16.2	0.5	0.3	chrX	82161377	82163001	(73877894)	+	MSTA-int	LTR/ERVL-MaLR	4	1631	(0)	4473618
8841	19.0	1.1	0.1	chrX	84039192	84040805	(72000090)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	4475514
1872	14.2	17.5	0.8	chrX	84040806	84041161	(71999734)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4475514
8172	18.6	4.1	2.4	chrX	85025372	85026993	(71013902)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1	4476533
1840	17.8	7.8	4.6	chrX	85026994	85027405	(71013490)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	4476533
22181	13.0	1.1	1.1	chrX	85555431	85561869	(70479026)	C	L1PA8A	LINE/L1	(2)	6473	1	4477129
1539	14.8	11.8	1.3	chrX	85865168	85865505	(70175390)	+	THE1D	LTR/ERVL-MaLR	1	424	(2)	4477407
11258	9.9	2.7	0.2	chrX	85865508	85867097	(70173798)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	4477407
2817	10.6	4.1	0.9	chrX	86306403	86306830	(69734065)	+	MLT2A1	LTR/ERVL	1	442	(2)	4477950
41134	7.8	0.9	0.4	chrX	86306833	86312455	(69728440)	+	HERVL-int	LTR/ERVL	1	5654	(0)	4477950
10057	14.9	1.8	0.5	chrX	86804481	86806089	(69234806)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	4478472
2292	12.9	11.0	0.5	chrX	86806090	86806472	(69234423)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4478472
9184	16.8	3.4	0.9	chrX	87787635	87789174	(68251721)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4479540
2311	15.1	1.6	0.8	chrX	87789175	87789535	(68251360)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4479540
11159	12.1	0.4	0.4	chrX	88969877	88971507	(67069388)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	4480873
1770	14.0	6.3	5.6	chrX	88971508	88971553	(67069342)	C	THE1D	LTR/ERVL-MaLR	(0)	381	342	4480873
1834	15.6	0.0	7.5	chrX	88971554	88971886	(67069009)	+	AluSz	SINE/Alu	1	308	(4)	4480874
9556	13.7	6.5	0.0	chrX	89485974	89487450	(66553445)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4481478
1940	16.0	3.6	3.6	chrX	89487451	89487813	(66553082)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	4481478
9973	15.4	1.7	0.5	chrX	91962079	91963687	(64077208)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	4484022
2625	12.0	0.0	0.3	chrX	91963690	91964065	(64076830)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4484023
8880	17.2	3.6	1.4	chrX	92258667	92259253	(63781642)	C	MSTA-int	LTR/ERVL-MaLR	(1045)	586	1	4484381
2580	13.5	3.3	0.2	chrX	92259260	92259668	(63781227)	C	MSTA	LTR/ERVL-MaLR	(6)	422	1	4484381
2202	13.4	1.4	2.7	chrX	92446339	92446707	(63594188)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4484590
10750	11.6	1.2	0.0	chrX	92446708	92448268	(63592627)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4484590
1980	13.0	6.9	3.1	chrX	93298909	93299258	(62741637)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4485463
10764	12.0	1.6	0.2	chrX	93299259	93300816	(62740079)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4485463
2385	29.1	3.6	10.3	chrX	93727164	93728633	(62312262)	C	MLT1E2-int	LTR/ERVL-MaLR	(1)	1370	2	4486004
1422	26.8	16.3	3.9	chrX	93728638	93729180	(62311715)	C	MLT1E2	LTR/ERVL-MaLR	(3)	624	1	4486004
1257	14.6	3.1	1.6	chrX	94172933	94173189	(61867706)	C	L1MA8	LINE/L1	(6)	6285	6025	4486618
567	21.5	2.3	0.0	chrX	94173190	94173319	(61867576)	C	MSTB1-int	LTR/ERVL-MaLR	(1518)	133	1	4486619
1298	15.0	2.2	2.2	chrX	94173320	94173551	(61867344)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	201	4486619
1997	27.9	5.5	2.5	chrX	94523475	94524830	(61516065)	+	L1M4c	LINE/L1	1322	3150	(92)	4487036
517	21.1	4.4	0.9	chrX	94524832	94524941	(61515954)	+	L1M2	LINE/L1	6	119	(6730)	4487040
1486	25.5	8.2	1.6	chrX	94524936	94525310	(61515585)	+	L1M2	LINE/L1	548	949	(5900)	4487040
11057	10.6	0.5	0.1	chrX	94620644	94622217	(61418678)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4487148
2446	9.9	0.6	3.0	chrX	94622218	94622581	(61418314)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4487148
10961	11.4	1.5	0.1	chrX	94988838	94990394	(61050501)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4487497
1933	15.1	5.5	3.1	chrX	94990395	94990749	(61050146)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4487497
18812	15.6	2.3	0.8	chrX	95238868	95246445	(60794450)	+	L1MA1	LINE/L1	16	7717	(4)	4487739
9980	9.2	0.2	0.0	chrX	96226708	96228013	(59812882)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	272	4488865
2606	9.0	0.0	1.1	chrX	96228050	96228408	(59812487)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	4488865
245	36.4	3.0	0.8	chrX	96732935	96733064	(59307831)	C	L2	LINE/L2	(466)	2953	2821	4489579
9667	11.7	5.3	4.2	chrX	98619337	98620898	(57419997)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4492278
2502	11.9	1.1	0.0	chrX	98620899	98621258	(57419637)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4492278
3526	10.7	0.6	0.0	chrX	98727945	98728441	(57312454)	C	THE1B-int	LTR/ERVL-MaLR	(1080)	500	1	4492384
2174	13.3	4.7	1.4	chrX	98728442	98728793	(57312102)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4492384
3483	12.7	4.2	4.1	chrX	101284916	101285213	(54755682)	C	L1MA8	LINE/L1	(423)	5868	5565	4495749
2596	8.8	0.0	0.7	chrX	101285214	101285519	(54755376)	+	AluSz	SINE/Alu	1	304	(8)	4495750
12	14.7	3.3	0.0	chrX	101617440	101617469	(54423426)	+	(CCCACC)n	Simple_repeat	1	31	(0)	4496263
2151	12.4	4.5	5.0	chrX	102971330	102971712	(53069183)	+	THE1B	LTR/ERVL-MaLR	1	381	(0)	4497889
10727	11.2	2.8	1.5	chrX	102971716	102973321	(53067574)	+	THE1B-int	LTR/ERVL-MaLR	4	1631	(0)	4497889
451	34.1	7.7	5.0	chrX	103606170	103606549	(52434346)	C	L2	LINE/L2	(652)	2767	2377	4498879
6508	21.5	1.3	9.9	chrX	105712685	105714438	(50326457)	C	THE1D-int	LTR/ERVL-MaLR	(29)	1602	2	4501943
1485	21.2	7.3	2.1	chrX	105714441	105714815	(50326080)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4501944
196	17.8	4.3	6.2	chrX	106415298	106415345	(49625550)	+	MIRc	SINE/MIR	116	162	(106)	4502695
604	13.6	13.7	1.5	chrX	106461797	106461930	(49578965)	C	MSTA	LTR/ERVL-MaLR	(60)	368	216	4502771
396	25.0	0.9	0.9	chrX	106461930	106462042	(49578853)	+	MLT1C	LTR/ERVL-MaLR	446	558	(2)	4502768
1848	24.0	7.1	3.6	chrX	106462062	106462795	(49578100)	+	MLT1C-int	LTR/ERVL-MaLR	4	818	(671)	4502768
7416	18.4	4.6	4.3	chrX	106604485	106605905	(49434990)	+	L1MD	LINE/L1	3698	5126	(1020)	4502918
1941	9.8	1.3	1.3	chrX	106605906	106605962	(49434933)	+	L1MA3	LINE/L1	6007	6063	(242)	4502920
2026	15.1	0.7	0.0	chrX	106605963	106606267	(49434628)	+	AluSz6	SINE/Alu	1	307	(5)	4502921
278	26.7	9.0	0.0	chrX	107728708	107728808	(48312087)	+	UCON132b	DNA/hAT-Tip100	4	114	(34)	4504719
1244	13.8	6.6	2.0	chrX	109573588	109573832	(46467063)	+	MSTA1	LTR/ERVL-MaLR	207	463	(2)	4507023
4951	26.4	4.4	5.5	chrX	109573835	109575354	(46465541)	+	MSTA1-int	LTR/ERVL-MaLR	1	1497	(154)	4507023
2594	16.4	0.9	0.0	chrX	114934512	114934949	(41105946)	C	MSTA-int	LTR/ERVL-MaLR	(1209)	442	1	4514705
1942	16.2	11.5	0.3	chrX	114934952	114935329	(41105566)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	4514705
5339	19.3	6.8	2.9	chrX	115587752	115588670	(40452225)	+	Charlie1a	DNA/hAT-Charlie	483	1455	(0)	4515794
13	14.2	3.2	0.0	chrX	116547619	116547649	(39493246)	+	GA-rich	Low_complexity	1	32	(0)	4516820
1357	15.2	6.0	2.9	chrX	116547747	116547949	(39492946)	+	MSTB	LTR/ERVL-MaLR	176	392	(34)	4516821
2084	15.7	0.0	0.0	chrX	116547950	116548242	(39492653)	C	AluSx	SINE/Alu	(19)	293	1	4516822
11438	10.2	0.4	0.1	chrX	116899749	116901323	(39139572)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4517134
1837	18.9	1.4	3.8	chrX	116901324	116901696	(39139199)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4517134
10485	12.1	0.6	2.9	chrX	116995646	116997260	(39043635)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	3	4517225
2179	15.5	0.6	3.5	chrX	116997261	116997634	(39043261)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4517225
20573	12.0	3.9	5.0	chrX	117173272	117178182	(38862713)	+	MER61-int	LTR/ERV1	14	5206	(11)	4517432
2183	14.4	8.9	0.8	chrX	117178195	117178587	(38862308)	+	MER61C	LTR/ERV1	1	428	(0)	4517432
13243	7.8	0.1	0.1	chrX	118304453	118306031	(37734864)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4518930
2367	12.8	3.3	3.0	chrX	118306032	118306394	(37734501)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4518930
642	30.0	9.2	8.0	chrX	119389858	119390321	(36650574)	+	L2	LINE/L2	378	847	(2572)	4520957
971	28.2	4.1	7.4	chrX	119682063	119682327	(36358568)	+	L1ME3G	LINE/L1	669	922	(2)	4521572
198	35.0	4.9	2.0	chrX	120561977	120562075	(35478820)	C	MamSINE1	SINE/tRNA-RTE	(114)	176	75	4523171
1560	18.8	14.0	1.1	chrX	121275522	121275893	(34765002)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4524210
2367	11.4	0.8	0.0	chrX	121275894	121276251	(34764644)	+	MSTA-int	LTR/ERVL-MaLR	1	361	(1270)	4524210
9400	15.8	2.9	2.9	chrX	122112295	122114656	(33926239)	C	L1PBa	LINE/L1	(4288)	2575	260	4525158
1607	31.2	8.0	3.0	chrX	123740784	123741506	(32299389)	C	ERVL-E-int	LTR/ERVL	(383)	5284	4523	4527214
4147	14.7	12.7	1.7	chrX	123824964	123825730	(32215165)	+	MER21B	LTR/ERVL	1	864	(4)	4527442
44	2.0	0.0	0.0	chrX	123960603	123960652	(32080243)	+	(A)n	Simple_repeat	1	50	(0)	4527819
20729	14.1	1.8	1.2	chrX	126322946	126329094	(29711801)	+	L1PA11	LINE/L1	369	6489	(0)	4531037
3994	13.5	0.6	0.5	chrX	126973984	126974610	(29066285)	C	MSTA-int	LTR/ERVL-MaLR	(1003)	628	1	4531746
2232	13.2	8.2	0.8	chrX	126974611	126975006	(29065889)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4531746
2018	15.8	2.8	1.7	chrX	127221051	127221410	(28819485)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4532021
9524	12.8	4.9	1.4	chrX	127221412	127222934	(28817961)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	4532021
5156	17.0	3.3	3.4	chrX	127982073	127983313	(28057582)	C	L1MC1	LINE/L1	(0)	6333	5096	4532867
252	22.7	1.1	12.9	chrX	127983314	127983342	(28057553)	C	SVA_A	Retroposon/SVA	(1171)	216	200	4532868
646	18.0	0.9	0.9	chrX	127983343	127983453	(28057442)	+	AluJo	SINE/Alu	1	111	(201)	4532869
655	16.1	0.4	4.7	chrX	127983396	127983549	(28057346)	C	THE1D	LTR/ERVL-MaLR	(61)	371	211	4532870
22	10.7	5.8	1.8	chrX	129843377	129843428	(26197467)	+	(GCCGGAG)n	Simple_repeat	1	55	(0)	4535413
16	18.2	7.6	2.8	chrX	129843488	129843495	(26197400)	+	(ACGCAC)n	Simple_repeat	1	25	(46)	4535414
18	28.4	0.0	0.0	chrX	129843496	129843542	(26197353)	+	(CA)n	Simple_repeat	1	47	(0)	4535415
16	18.2	7.6	2.8	chrX	129843543	129843553	(26197342)	+	(ACGCAC)n	Simple_repeat	26	71	(0)	4535414
2155	13.3	0.0	1.0	chrX	133716952	133717260	(22323635)	C	AluSz6	SINE/Alu	(5)	307	2	4541465
9189	18.9	4.5	8.1	chrX	133717261	133717309	(22323586)	+	L1M4	LINE/L1	1816	1855	(5662)	4541463
3960	4.8	0.0	0.0	chrX	133717310	133717772	(22323123)	+	LTR2	LTR/ERV1	1	463	(0)	4541466
1694	14.1	14.0	2.5	chrX	137934093	137934413	(18106482)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4548638
6049	8.7	0.6	0.0	chrX	137934414	137935250	(18105645)	+	THE1B-int	LTR/ERVL-MaLR	1	842	(738)	4548638
1327	21.9	8.5	6.0	chrX	138148584	138148997	(17891898)	+	MSTC	LTR/ERVL-MaLR	4	428	(0)	4548895
5154	25.5	11.9	2.5	chrX	138149000	138150566	(17890329)	+	MSTC-int	LTR/ERVL-MaLR	2	1735	(0)	4548895
7827	17.1	3.4	0.2	chrX	139044658	139046008	(16994887)	C	MSTA-int	LTR/ERVL-MaLR	(256)	1395	1	4550095
2233	16.4	5.8	1.9	chrX	139046009	139046419	(16994476)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4550095
2075	13.3	7.1	0.8	chrX	139306533	139306889	(16734006)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4550524
6560	11.6	18.8	0.6	chrX	139306891	139308150	(16732745)	+	THE1D-int	LTR/ERVL-MaLR	2	1542	(38)	4550524
2276	14.2	2.4	0.5	chrX	140171624	140171991	(15868904)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4551832
10310	11.5	4.2	0.7	chrX	140171992	140173514	(15867381)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4551832
3188	11.1	0.7	0.0	chrX	140695835	140696267	(15344628)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	1196	4552643
2952	10.1	0.0	0.5	chrX	140696288	140696664	(15344231)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4552643
10226	14.8	5.3	0.3	chrX	143544428	143545976	(12494919)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	4556686
2273	16.7	7.7	0.8	chrX	143545977	143546374	(12494521)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4556686
1998	16.2	1.6	3.8	chrX	143874590	143874961	(12165934)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4557136
11659	9.1	0.2	0.4	chrX	143874962	143876543	(12164352)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4557136
2751	15.5	8.4	0.2	chrX	148028306	148028776	(8012119)	C	MLT2B4	LTR/ERVL	(43)	513	1	4562732
11782	9.0	0.8	0.1	chrX	148667831	148669395	(7371500)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	3	4563638
2272	13.6	3.3	1.7	chrX	148669398	148669755	(7371140)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4563638
2454	9.7	0.7	0.0	chrX	149842454	149842752	(6198143)	C	AluSp	SINE/Alu	(12)	301	1	4565081
9813	14.7	8.1	0.7	chrX	149842753	149843002	(6197893)	C	MSTA-int	LTR/ERVL-MaLR	(1375)	256	1	4565080
2286	13.0	13.6	0.8	chrX	149843003	149843375	(6197520)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4565080
279	32.4	8.8	5.8	chrX	149843376	149843544	(6197351)	C	L1MD2	LINE/L1	(5831)	716	547	4565078
10284	10.6	3.5	4.0	chrX	152505814	152507401	(3533494)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	4569031
1916	14.5	8.0	1.4	chrX	152507402	152507751	(3533144)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	4569031
12	12.0	0.0	6.5	chrX	153765965	153765995	(2274900)	+	(CCCCT)n	Simple_repeat	1	31	(0)	4570723
13	15.5	9.3	0.0	chrX	154373080	154373122	(1667773)	+	G-rich	Low_complexity	1	47	(0)	4571756
12	5.6	0.0	0.0	chrX	155279028	155279046	(761849)	+	(ATG)n	Simple_repeat	1	19	(0)	4573158
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
338	21.0	6.9	0.0	chrY	11281975	11282055	(45945360)	C	MER21C	LTR/ERVL	(822)	116	30	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157