2137	15.8	12.2	0.0	chr1	1470519	1470858	(247485564)	C	LTR10A	LTR/ERV1	(62)	547	171	1798
1862	13.1	18.2	2.6	chr1	1470859	1471236	(247485186)	+	LTR7	LTR/ERV1	1	450	(0)	1799
12	18.0	5.0	2.4	chr1	3774857	3774896	(245181526)	+	(CTCCC)n	Simple_repeat	1	42	(0)	4334
249	34.1	3.7	8.1	chr1	3775045	3775208	(245181214)	+	MIRc	SINE/MIR	9	162	(46)	4335
4092	8.5	1.8	0.2	chr1	8122631	8123171	(240833251)	C	MER41A	LTR/ERV1	(4)	550	1	10968
1017	30.8	8.9	2.4	chr1	8123172	8123386	(240833036)	C	L1MC4	LINE/L1	(242)	7800	7553	10967
2014	12.8	0.0	1.1	chr1	8790604	8790885	(240165537)	C	AluSz6	SINE/Alu	(33)	279	1	12254
1933	12.8	0.7	1.4	chr1	8859711	8859880	(240096542)	C	AluSx	SINE/Alu	(7)	305	135	12414
2238	9.1	0.0	0.0	chr1	8859881	8860176	(240096246)	C	AluSg4	SINE/Alu	(14)	296	1	12415
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
465	20.5	2.4	13.5	chr1	12075463	12075654	(236880768)	C	MLT1D	LTR/ERVL-MaLR	(274)	231	62	19088
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
500	9.4	0.0	0.0	chr1	12218534	12218597	(236737825)	+	AluJb	SINE/Alu	226	289	(23)	19421
261	29.0	12.3	1.0	chr1	12218610	12218710	(236737712)	C	MIRc	SINE/MIR	(35)	233	120	19422
1987	13.8	0.7	0.3	chr1	12449843	12450132	(236506290)	+	AluSx	SINE/Alu	1	291	(21)	19811
241	32.4	3.4	10.4	chr1	12450133	12450253	(236506169)	C	MIRb	SINE/MIR	(99)	169	57	19810
280	31.7	4.7	2.2	chr1	13808682	13808826	(235147596)	C	L2a	LINE/L2	(22)	3404	3224	22065
15	5.6	0.0	0.0	chr1	15834460	15834478	(233121944)	+	(T)n	Simple_repeat	1	19	(0)	26169
886	30.0	8.4	5.5	chr1	16614267	16614887	(232341535)	+	L2b	LINE/L2	2508	3162	(213)	27821
2041	16.7	0.0	1.0	chr1	16615322	16615632	(232340790)	+	AluJb	SINE/Alu	2	309	(3)	27822
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
2240	9.7	3.9	0.0	chr1	16624670	16624969	(232331453)	+	AluSz	SINE/Alu	1	312	(0)	27844
1037	20.8	4.8	0.0	chr1	16643865	16644061	(232312361)	C	MER3	DNA/hAT-Charlie	(0)	209	3	27883
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
4196	15.3	4.0	2.3	chr1	17360311	17360529	(231595893)	C	LTR62	LTR/ERVL	(487)	222	1	29249
2912	20.4	2.6	5.7	chr1	18421927	18422180	(230534242)	+	LTR49-int	LTR/ERV1	181	429	(7778)	31615
3179	14.4	6.5	12.3	chr1	18422181	18422855	(230533567)	+	MER41B	LTR/ERV1	2	634	(0)	31617
2594	6.2	0.0	0.0	chr1	18534118	18534421	(230422001)	+	AluY	SINE/Alu	1	304	(7)	31859
702	25.9	6.7	6.1	chr1	18534422	18534742	(230421680)	C	LTR85a	LTR/Gypsy?	(411)	373	1	31858
4262	9.8	2.8	0.0	chr1	19878130	19878724	(229077698)	C	LTR9	LTR/ERV1	(0)	612	1	34706
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
3255	15.4	3.0	4.9	chr1	21791392	21791926	(227164496)	C	MER41B	LTR/ERV1	(37)	597	73	38679
2017	9.4	0.0	0.4	chr1	21791927	21792182	(227164240)	+	AluY	SINE/Alu	1	255	(56)	38680
3255	15.4	3.0	4.9	chr1	21792183	21792255	(227164167)	C	MER41B	LTR/ERV1	(562)	72	1	38679
195	36.1	3.2	14.8	chr1	21905067	21905149	(227051273)	+	L2a	LINE/L2	2842	2921	(498)	38919
43	5.8	1.9	0.0	chr1	21905150	21905203	(227051219)	+	(AC)n	Simple_repeat	1	55	(0)	38920
195	36.1	3.2	14.8	chr1	21905204	21905236	(227051186)	+	L2a	LINE/L2	2922	2935	(484)	38919
36	7.2	0.0	0.0	chr1	21905237	21905280	(227051142)	+	(AC)n	Simple_repeat	1	44	(0)	38921
181	24.4	0.0	0.0	chr1	23018902	23018946	(225937476)	C	L2	LINE/L2	(350)	3069	3025	41473
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
305	27.4	2.1	1.0	chr1	23835964	23836059	(225120363)	+	L1M5	LINE/L1	3354	3450	(2696)	43476
3365	15.4	3.6	5.1	chr1	23836061	23836705	(225119717)	+	L1MB4	LINE/L1	5448	6082	(98)	43484
295	32.3	2.4	4.6	chr1	27490708	27490837	(221465585)	+	MIRb	SINE/MIR	63	189	(79)	51854
403	30.4	16.9	0.2	chr1	27542523	27542734	(221413688)	C	MIRb	SINE/MIR	(4)	258	8	52004
354	32.2	4.5	3.2	chr1	28248318	28248471	(220707951)	+	MIR3	SINE/MIR	46	201	(7)	53650
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
1580	4.5	1.0	0.0	chr1	28508558	28508759	(220447663)	+	U17	snRNA	1	204	(3)	54380
523	28.9	6.8	0.0	chr1	28511132	28511292	(220445130)	+	MIR	SINE/MIR	34	206	(56)	54385
1874	7.9	10.4	0.4	chr1	28511390	28511667	(220444755)	C	AluYj4	SINE/Alu	(1)	310	2	54386
1967	11.2	0.7	1.4	chr1	28511668	28511963	(220444459)	C	AluSz	SINE/Alu	(18)	294	1	54387
982	21.4	6.0	0.1	chr1	28512481	28512806	(220443616)	C	L1MEc	LINE/L1	(2974)	3345	2996	54389
1811	9.8	6.4	0.0	chr1	28512808	28513072	(220443350)	C	AluYc	SINE/Alu	(16)	283	1	54390
1972	8.8	0.0	0.4	chr1	28515900	28516162	(220440260)	+	AluSq2	SINE/Alu	1	262	(51)	54403
544	5.9	0.0	0.0	chr1	28516163	28516230	(220440192)	+	AluSx	SINE/Alu	69	136	(176)	54404
2102	8.4	3.4	0.3	chr1	28516232	28516518	(220439904)	+	AluSg7	SINE/Alu	1	296	(13)	54405
1594	9.7	15.7	0.0	chr1	28747291	28747538	(220208884)	+	AluSq4	SINE/Alu	2	295	(16)	55038
386	7.4	0.0	1.8	chr1	28747554	28747608	(220208814)	C	AluY	SINE/Alu	(4)	297	244	55039
814	9.2	0.0	0.0	chr1	28747609	28747717	(220208705)	C	AluY	SINE/Alu	(202)	109	1	55039
462	34.5	6.1	2.5	chr1	28883328	28883565	(220072857)	+	L2b	LINE/L2	2946	3192	(183)	55398
196	26.6	18.3	0.0	chr1	28883685	28883778	(220072644)	C	MIRc	SINE/MIR	(100)	168	54	55399
477	28.2	3.0	5.8	chr1	30768785	30768957	(218187465)	C	MIRc	SINE/MIR	(53)	215	48	59021
611	23.0	6.3	5.8	chr1	30777041	30777229	(218179193)	C	MIR	SINE/MIR	(60)	208	19	59038
326	30.7	11.3	0.2	chr1	30777173	30777357	(218179065)	+	MIRb	SINE/MIR	20	233	(35)	59039
3690	13.9	3.5	1.9	chr1	30918903	30919495	(218036927)	C	LTR26	LTR/ERV1	(0)	603	1	59391
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
385	25.8	12.3	3.5	chr1	31066293	31066316	(217890106)	+	L1MB7	LINE/L1	4978	5001	(1142)	59681
2499	5.4	0.0	0.3	chr1	31066317	31066614	(217889808)	+	AluY	SINE/Alu	1	297	(14)	59682
2927	19.7	2.2	12.8	chr1	31171162	31171364	(217785058)	+	LTR8	LTR/ERV1	1	192	(499)	60029
552	27.6	16.6	2.2	chr1	31827153	31827419	(217129003)	C	LTR16E1	LTR/ERVL	(223)	315	3	61399
641	24.6	0.0	0.0	chr1	31827423	31827564	(217128858)	C	L1ME3B	LINE/L1	(626)	5617	5476	61397
2262	9.2	0.4	0.0	chr1	31955659	31955939	(217000483)	+	AluSp	SINE/Alu	2	283	(30)	61707
35	0.0	0.0	0.0	chr1	31955940	31955972	(217000450)	+	(ATAA)n	Simple_repeat	1	33	(0)	61708
372	30.9	4.6	1.8	chr1	32179169	32179330	(216777092)	C	MIR3	SINE/MIR	(85)	183	20	62269
475	37.4	10.3	3.0	chr1	32390925	32391079	(216565343)	C	L2c	LINE/L2	(1046)	2373	2194	62764
243	28.8	2.6	2.6	chr1	32391107	32391220	(216565202)	C	L2-1_AMi	LINE/L2	(991)	244	131	62768
185	29.1	17.7	4.2	chr1	33350207	33350371	(215606051)	C	MIR	SINE/MIR	(2)	260	69	64946
199	22.5	0.0	0.0	chr1	33350423	33350462	(215605960)	+	MIR	SINE/MIR	219	258	(4)	64944
373	21.3	18.6	0.8	chr1	34843950	34844096	(214112326)	C	MIRb	SINE/MIR	(40)	228	39	67526
3196	21.1	4.7	8.3	chr1	35278720	35280084	(213676338)	C	MLT1C-int	LTR/ERVL-MaLR	(103)	1386	44	68443
188	33.3	4.9	0.0	chr1	35930475	35930552	(213025870)	C	L2	LINE/L2	(528)	2891	2810	69780
691	19.2	0.8	0.8	chr1	36248315	36248439	(212707983)	C	AluJr	SINE/Alu	(187)	125	1	70487
1177	13.0	13.8	0.0	chr1	36248448	36248647	(212707775)	C	AluJr	SINE/Alu	(10)	302	71	70488
205	34.5	7.4	12.0	chr1	36248791	36248887	(212707535)	C	L2c	LINE/L2	(0)	3375	3285	70489
1877	14.6	5.8	0.3	chr1	36248888	36249182	(212707240)	C	AluSx	SINE/Alu	(0)	312	1	70490
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
3666	20.2	0.7	6.0	chr1	38523591	38524916	(210431506)	C	L1MB8	LINE/L1	(25)	6153	4899	74825
524	24.9	12.8	3.8	chr1	40039338	40039550	(208916872)	+	MIRb	SINE/MIR	31	265	(3)	77994
280	27.4	19.1	3.6	chr1	42686726	42686918	(206269504)	C	MIR	SINE/MIR	(32)	230	1	82980
1183	16.0	1.6	0.0	chr1	42856518	42856705	(206099717)	C	AluJb	SINE/Alu	(12)	300	110	83288
2863	11.0	7.0	0.5	chr1	42856712	42857150	(206099272)	+	LTR7C	LTR/ERV1	1	470	(1)	83289
2884	11.6	7.0	0.0	chr1	42859447	42859884	(206096538)	+	LTR7C	LTR/ERV1	1	471	(0)	83290
435	28.6	2.8	3.5	chr1	42922454	42922598	(206033824)	C	MIRb	SINE/MIR	(103)	165	22	83365
833	31.4	2.9	0.4	chr1	42937520	42937756	(206018666)	+	MIR	SINE/MIR	10	252	(10)	83383
1148	21.4	4.7	1.9	chr1	42950085	42950351	(206006071)	+	MER58B	DNA/hAT-Charlie	67	341	(0)	83413
528	19.3	20.2	1.2	chr1	42963707	42963874	(205992548)	+	L1ME3A	LINE/L1	5836	6043	(130)	83440
983	16.9	2.4	11.4	chr1	42963892	42964164	(205992258)	+	MER96B	DNA/hAT-Tip100	170	417	(0)	83441
1267	32.1	13.1	2.3	chr1	43522548	43523633	(205432789)	C	L2c	LINE/L2	(154)	3233	2005	84451
731	16.3	0.0	2.8	chr1	44730545	44730685	(204225737)	+	AluJr	SINE/Alu	175	311	(1)	86587
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
581	20.9	3.5	0.0	chr1	44819555	44819664	(204136758)	C	AluSx3	SINE/Alu	(17)	294	181	86770
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
1409	10.3	0.0	0.0	chr1	45315799	45315973	(203640449)	+	AluSz	SINE/Alu	3	177	(135)	87729
2015	13.2	17.3	0.8	chr1	45315974	45316348	(203640074)	+	LTR7	LTR/ERV1	1	450	(0)	87730
220	17.4	4.2	0.0	chr1	45687561	45687606	(203268816)	C	MIR3	SINE/MIR	(80)	128	81	88537
334	33.9	4.4	0.8	chr1	46420143	46420273	(202536149)	C	MIRc	SINE/MIR	(113)	155	20	90014
495	15.6	7.2	0.0	chr1	46450150	46450226	(202506196)	+	AluJo	SINE/Alu	105	187	(125)	90071
246	26.3	21.7	2.0	chr1	46450227	46450428	(202505994)	C	MIRb	SINE/MIR	(11)	257	5	90072
19	22.7	0.0	0.0	chr1	46522733	46522773	(202433649)	+	(TG)n	Simple_repeat	1	41	(0)	90191
201	32.9	1.4	2.7	chr1	46544914	46544988	(202411434)	C	MIRb	SINE/MIR	(77)	191	118	90225
201	27.7	0.0	0.0	chr1	46545134	46545180	(202411242)	+	L2b	LINE/L2	3291	3337	(38)	90226
2346	9.2	0.0	0.3	chr1	47382099	47382401	(201574021)	+	AluSz	SINE/Alu	1	302	(10)	91481
335	37.6	8.8	5.9	chr1	51519964	51520251	(197436171)	+	L2b	LINE/L2	3059	3355	(20)	98837
374	28.0	15.4	4.7	chr1	51520339	51520574	(197435848)	+	L2c	LINE/L2	3105	3370	(17)	98838
2328	17.3	11.8	4.2	chr1	51622406	51622925	(197333497)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	99119
2818	13.7	16.0	4.7	chr1	51631557	51631891	(197324531)	C	LTR8A	LTR/ERV1	(372)	355	1	99137
5087	10.2	6.5	5.9	chr1	51631892	51632338	(197324084)	C	Tigger3b	DNA/TcMar-Tigger	(692)	539	64	99134
2316	11.9	0.0	0.0	chr1	51873480	51873810	(197082612)	C	AluSx1	SINE/Alu	(0)	312	1	99615
1482	10.0	0.4	7.3	chr1	53004376	53004662	(195951760)	+	LTR7B	LTR/ERV1	1	237	(227)	102281
24378	6.0	0.6	0.1	chr1	53004663	53010782	(195945640)	+	L1PA5	LINE/L1	8	6146	(8)	102282
8266	15.1	3.7	2.8	chr1	53432998	53434803	(195521619)	+	HERVH-int	LTR/ERV1	12	2150	(5563)	103078
2006	10.2	8.8	2.9	chr1	53434809	53435177	(195521245)	+	LTR7	LTR/ERV1	6	450	(0)	103079
561	25.4	12.0	0.5	chr1	57227273	57227478	(191728944)	C	L2a	LINE/L2	(4)	3422	3190	110392
2088	15.3	0.3	1.0	chr1	57227508	57227519	(191728903)	C	AluJb	SINE/Alu	(7)	305	294	110393
50	0.0	0.0	0.0	chr1	57227520	57227562	(191728860)	+	(TG)n	Simple_repeat	1	43	(0)	110394
2088	15.3	0.3	1.0	chr1	57227563	57227856	(191728566)	C	AluJb	SINE/Alu	(19)	293	1	110393
564	26.3	15.5	2.3	chr1	65292780	65293086	(183663336)	C	MLT1H	LTR/ERVL-MaLR	(28)	521	167	125517
865	23.1	5.2	11.6	chr1	65293098	65293493	(183662929)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	16	125518
761	16.0	17.3	5.1	chr1	65318148	65318384	(183638038)	+	ORSL	DNA/hAT-Tip100	2	273	(2)	125568
2626	7.9	2.1	0.5	chr1	65318510	65318877	(183637545)	+	L1PA11	LINE/L1	5800	6173	(1)	125569
335	33.3	5.3	0.0	chr1	67689965	67690090	(181266332)	+	L2b	LINE/L2	3243	3375	(0)	129415
12	19.5	2.9	0.0	chr1	67690248	67690282	(181266140)	+	(AATTCTT)n	Simple_repeat	1	36	(0)	129416
684	25.7	6.9	4.8	chr1	67922134	67922447	(181033975)	+	MER34	LTR/ERV1	1	523	(184)	129817
292	4.2	9.4	0.0	chr1	67922472	67922519	(181033903)	C	MER57B2	LTR/ERV1	(0)	403	351	129818
2118	10.2	2.4	4.3	chr1	67922556	67922859	(181033563)	+	AluSz	SINE/Alu	1	298	(14)	129819
601	18.9	14.5	6.9	chr1	67923019	67923337	(181033085)	C	LTR54	LTR/ERV1	(112)	386	1	129820
14094	14.3	2.0	2.9	chr1	67923338	67925906	(181030516)	C	MER57A-int	LTR/ERV1	(392)	5795	3251	129818
277	12.8	17.6	0.0	chr1	70367544	70367589	(178588833)	C	AluSg4	SINE/Alu	(38)	272	217	133304
2739	12.0	5.5	1.9	chr1	70367629	70368061	(178588361)	+	LTR7	LTR/ERV1	1	450	(0)	133305
2162	12.3	0.7	0.0	chr1	77976500	77976792	(170979630)	C	AluSz	SINE/Alu	(17)	295	1	143849
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
183	35.6	0.0	3.3	chr1	84688843	84688932	(164267490)	C	MIR1_Amn	SINE/MIR	(75)	155	69	152918
2658	11.1	2.7	0.0	chr1	86461466	86461862	(162494560)	C	MER61E	LTR/ERV1	(161)	408	1	155637
629	25.4	11.8	0.4	chr1	93349732	93349956	(155606466)	C	MER5C	DNA/hAT-Charlie	(51)	262	9	166158
2350	8.7	0.3	0.3	chr1	93664121	93664418	(155292004)	C	AluSp	SINE/Alu	(15)	298	1	166642
3127	8.7	2.0	0.9	chr1	94572384	94572826	(154383596)	C	LTR7	LTR/ERV1	(2)	448	1	167978
3148	15.2	4.2	4.5	chr1	94572827	94573488	(154382934)	C	L1M4	LINE/L1	(5531)	1986	1327	167977
361	35.4	2.1	0.5	chr1	94635287	94635430	(154320992)	+	MIR3	SINE/MIR	19	162	(46)	168059
1554	20.5	6.3	7.3	chr1	99771425	99771902	(149184520)	C	MER65D	LTR/ERV1	(0)	473	1	175335
3289	16.9	2.1	5.8	chr1	100362799	100363434	(148592988)	C	LTR9	LTR/ERV1	(0)	612	1	176463
2035	10.4	18.7	0.3	chr1	109727238	109727604	(139228818)	C	LTR7	LTR/ERV1	(0)	450	1	189008
2877	11.1	5.9	2.9	chr1	109727607	109728373	(139228049)	C	PABL_A-int	LTR/ERV1	(5330)	1268	503	189009
4051	10.7	0.2	0.0	chr1	110031079	110031631	(138924791)	C	MER41A	LTR/ERV1	(0)	554	1	189448
181	17.6	0.0	0.0	chr1	110031638	110031671	(138924751)	C	MIRc	SINE/MIR	(106)	162	129	189449
6553	26.9	3.1	1.2	chr1	111084309	111086120	(137870302)	C	L1PA15	LINE/L1	(4512)	3643	1796	191081
571	36.5	5.7	2.5	chr1	111162011	111162485	(137793937)	C	L2	LINE/L2	(404)	3015	2525	191188
20	20.8	1.7	3.3	chr1	113677711	113677770	(135278652)	+	(TTCTT)n	Simple_repeat	1	61	(0)	195346
591	22.0	3.6	3.0	chr1	120354987	120355150	(128601272)	+	U1	snRNA	1	165	(0)	205414
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
267	23.3	1.9	9.5	chr1	120942901	120943016	(128013406)	+	AluSz	SINE/Alu	16	122	(190)	206304
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1188	16.7	3.4	15.8	chr1	145991760	145992094	(102964328)	+	AluJo	SINE/Alu	2	293	(19)	211891
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
2228	8.4	0.7	0.7	chr1	146035980	146036276	(102920146)	C	AluSq	SINE/Alu	(16)	297	1	211989
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
452	30.3	13.4	3.2	chr1	149848933	149849212	(99107210)	+	L2	LINE/L2	2365	2677	(742)	217850
325	20.3	6.0	4.8	chr1	149849291	149849373	(99107049)	C	MER5A	DNA/hAT-Charlie	(105)	84	1	217851
4089	9.7	2.2	0.2	chr1	153343705	153344272	(95612150)	+	LTR19B	LTR/ERV1	1	580	(0)	223933
356	37.2	2.0	0.0	chr1	153433113	153433354	(95523068)	+	HERV16-int	LTR/ERVL	1332	1578	(4089)	224064
1866	21.9	8.5	0.5	chr1	153433357	153433947	(95522475)	+	MER77B	LTR/ERVL	1	681	(19)	224065
504	9.1	0.0	0.0	chr1	153671590	153671655	(95284767)	C	AluSq10	SINE/Alu	(246)	67	2	224507
723	10.6	3.4	0.0	chr1	153671656	153671768	(95284654)	C	L1PB2	LINE/L1	(39)	6112	5996	224508
1810	10.8	0.4	0.0	chr1	155306973	155307212	(93649210)	C	AluSx3	SINE/Alu	(70)	241	1	227711
456	11.5	3.3	4.4	chr1	155307213	155307272	(93649150)	+	MER51B	LTR/ERV1	318	377	(0)	227710
432	10.3	0.0	0.0	chr1	155307273	155307340	(93649082)	C	L1MB3	LINE/L1	(250)	5933	5866	227712
2126	11.9	4.9	0.3	chr1	155307341	155307693	(93648729)	+	MER41A	LTR/ERV1	1	370	(184)	227713
508	28.9	4.3	1.8	chr1	162391749	162391900	(86564522)	C	MIRb	SINE/MIR	(65)	203	40	239041
14	12.9	0.0	5.1	chr1	162392150	162392171	(86564251)	+	GA-rich	Low_complexity	1	20	(0)	239042
70	0.0	0.0	0.0	chr1	162392172	162392233	(86564189)	+	(AAGG)n	Simple_repeat	1	62	(0)	239043
1989	19.2	4.5	0.9	chr1	166471418	166471848	(82484574)	+	LTR7C	LTR/ERV1	25	471	(0)	245316
4022	8.0	0.9	3.4	chr1	166692851	166693418	(82263004)	C	MER41A	LTR/ERV1	(0)	554	1	245613
572	32.1	8.3	7.0	chr1	166700026	166700510	(82255912)	C	MLT1O	LTR/ERVL-MaLR	(46)	496	5	245624
746	32.3	13.1	3.3	chr1	166705221	166705697	(82250725)	C	LTR16E1	LTR/ERVL	(12)	526	3	245632
211	35.5	8.1	1.9	chr1	167249439	167249808	(81706614)	C	L2c	LINE/L2	(2146)	1273	879	246419
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
658	0.0	0.0	0.0	chr1	167715488	167715559	(81240863)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	247182
879	29.0	9.1	1.6	chr1	167821282	167821656	(81134766)	+	LTR79	LTR/ERVL	6	411	(116)	247369
1949	16.9	5.5	1.4	chr1	167984837	167985184	(80971238)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	247637
2457	15.8	7.0	0.2	chr1	168865665	168866103	(80090319)	C	LTR7C	LTR/ERV1	(0)	471	1	249061
317	31.4	5.1	7.0	chr1	168866104	168866227	(80090195)	+	L3	LINE/CR1	3950	4067	(32)	249060
1843	15.2	0.7	3.4	chr1	171371589	171371884	(77584538)	+	AluJo	SINE/Alu	1	288	(24)	252585
241	34.5	5.5	7.5	chr1	171371887	171371955	(77584467)	C	L2b	LINE/L2	(131)	3256	3184	252586
2804	11.0	9.1	1.1	chr1	171371956	171372388	(77584034)	+	LTR7C	LTR/ERV1	1	471	(0)	252587
1561	16.6	0.0	2.5	chr1	173861613	173861847	(75094575)	+	AluSz6	SINE/Alu	1	229	(83)	256231
971	10.4	15.0	1.4	chr1	173861848	173861991	(75094431)	C	AluSz6	SINE/Alu	(68)	244	78	256232
3934	7.6	5.0	0.2	chr1	179363083	179363609	(69592813)	C	MER41A	LTR/ERV1	(0)	554	1	264713
2123	12.7	0.0	1.9	chr1	179877259	179877566	(69078856)	+	AluJr	SINE/Alu	1	302	(10)	265459
3896	12.8	4.1	0.7	chr1	181173937	181174423	(67781999)	+	MER41B	LTR/ERV1	1	509	(125)	267598
480	22.3	3.2	1.6	chr1	182575814	182575936	(66380486)	+	MER46C	DNA/TcMar-Tigger	6	130	(208)	269686
885	25.8	16.8	4.9	chr1	186082218	186082650	(62873772)	C	MLT1H	LTR/ERVL-MaLR	(13)	476	1	275140
34	0.0	0.0	2.9	chr1	186375989	186376022	(62580400)	+	(GT)n	Simple_repeat	1	34	(0)	275491
1541	10.7	1.9	1.9	chr1	186902306	186902563	(62053859)	+	HERVH-int	LTR/ERV1	7441	7698	(15)	276278
1479	13.7	3.9	5.4	chr1	186902564	186902886	(62053536)	+	LTR7	LTR/ERV1	47	412	(38)	276279
2222	8.2	19.1	0.3	chr1	192980176	192980540	(55975882)	C	LTR7	LTR/ERV1	(0)	450	1	284175
9543	9.4	0.6	1.2	chr1	192980541	192981910	(55974512)	+	Charlie3	DNA/hAT-Charlie	1345	2706	(0)	284176
2081	13.3	7.1	1.5	chr1	195866760	195867102	(53089320)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	287952
14	9.3	2.5	7.3	chr1	195867189	195867228	(53089194)	+	(TAACAA)n	Simple_repeat	1	41	(0)	287953
14039	15.1	1.2	1.9	chr1	196515650	196520574	(52435848)	+	L1PREC2	LINE/L1	19	6253	(1888)	288768
220	32.3	1.0	6.8	chr1	201170595	201170697	(47785725)	C	L2b	LINE/L2	(7)	3419	3310	295611
442	21.8	12.0	2.6	chr1	201882712	201882862	(47073560)	+	MIRb	SINE/MIR	50	216	(52)	296783
2940	17.9	3.9	0.6	chr1	204172039	204172561	(44783861)	+	MER87	LTR/ERV1	1	541	(0)	301120
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
12	20.4	0.0	0.0	chr1	204672677	204672705	(44283717)	+	(CTCC)n	Simple_repeat	1	29	(0)	302048
1597	17.9	13.3	3.4	chr1	206735427	206735871	(42220551)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	8	305601
21343	13.8	2.2	4.0	chr1	206846257	206848499	(42107923)	+	L1MA2	LINE/L1	159	2361	(5204)	305805
2166	16.7	1.4	4.7	chr1	207520092	207520538	(41435884)	+	MER54A	LTR/ERVL	3	434	(467)	306770
14	24.5	4.6	1.5	chr1	207626741	207626755	(41329667)	+	(AATAA)n	Simple_repeat	1	16	(0)	306929
2325	12.9	0.0	0.0	chr1	207626756	207627057	(41329365)	+	AluSq	SINE/Alu	1	302	(11)	306930
7708	8.5	0.7	0.2	chr1	207635112	207636074	(41320348)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	306944
259	13.5	7.5	17.8	chr1	207636075	207636164	(41320258)	C	SVA_F	Retroposon/SVA	(450)	925	846	306945
13912	4.3	0.2	0.0	chr1	207636165	207637777	(41318645)	C	HERVK-int	LTR/ERVK	(95)	7441	5826	306946
2007	17.6	7.5	0.5	chr1	207743986	207744395	(41212027)	C	LTR8	LTR/ERV1	(250)	441	1	307097
4873	9.9	3.9	5.2	chr1	207744396	207745208	(41211214)	+	HUERS-P3b-int	LTR/ERV1	3073	3874	(3544)	307095
2717	13.4	6.8	0.2	chr1	209471561	209472000	(39484422)	C	LTR7C	LTR/ERV1	(0)	471	1	309699
1909	17.8	3.0	4.6	chr1	209472001	209472322	(39484100)	C	MLT1A0	LTR/ERVL-MaLR	(44)	321	1	309697
37	6.6	0.0	0.0	chr1	211607238	211607285	(37349137)	+	(GA)n	Simple_repeat	1	48	(0)	313030
1793	17.5	11.1	3.1	chr1	212478011	212478420	(36478002)	C	LTR54B	LTR/ERV1	(44)	454	2	314582
407	27.8	3.1	2.3	chr1	212478475	212478603	(36477819)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	433	314585
568	28.7	9.4	5.6	chr1	219902600	219903049	(29053373)	C	Tigger20a	DNA/TcMar-Tigger	(7)	966	498	325296
453	26.6	6.7	4.1	chr1	221738616	221738760	(27217662)	C	MIR3	SINE/MIR	(35)	173	25	328098
659	22.9	8.6	12.3	chr1	221947155	221947746	(27008676)	C	LOR1-int	LTR/ERV1	(2697)	2426	1552	328426
3761	6.7	1.1	0.6	chr1	221947781	221948249	(27008173)	+	LTR7C	LTR/ERV1	1	471	(0)	328427
3784	8.5	0.2	0.2	chr1	221958165	221958635	(26997787)	+	LTR7C	LTR/ERV1	1	471	(0)	328430
371	37.7	2.9	1.2	chr1	225881247	225881415	(23075007)	+	MIR	SINE/MIR	91	262	(0)	334734
2330	9.2	0.0	0.3	chr1	225980918	225981220	(22975202)	+	AluYm1	SINE/Alu	2	303	(8)	334951
895	24.6	10.0	0.0	chr1	225981374	225981588	(22974834)	+	LTR16B	LTR/ERVL	1	239	(224)	334952
216	33.3	9.8	3.2	chr1	226110954	226111077	(22845345)	C	MIRb	SINE/MIR	(72)	196	64	335234
717	24.6	16.5	1.2	chr1	226111078	226111487	(22844935)	C	LTR82B	LTR/ERVL	(271)	559	21	335235
2842	11.8	6.8	0.7	chr1	226833503	226833944	(22122478)	+	LTR7C	LTR/ERV1	1	471	(0)	336564
2246	7.4	1.0	0.0	chr1	228485782	228486079	(20470343)	C	AluSc5	SINE/Alu	(8)	301	1	338795
1499	23.2	6.6	8.5	chr1	228501092	228501759	(20454663)	C	MER77B	LTR/ERVL	(6)	694	41	338819
4058	13.4	2.0	1.0	chr1	230138555	230139059	(18817363)	C	MER41B	LTR/ERV1	(122)	512	2	341466
375	35.1	6.3	3.0	chr1	231048983	231049287	(17907135)	C	L3	LINE/CR1	(342)	3757	3442	342826
4290	7.5	0.9	1.1	chr1	233471574	233471990	(15484432)	+	MER41A	LTR/ERV1	5	418	(136)	346456
2144	11.5	16.7	0.3	chr1	233471991	233472366	(15484056)	+	LTR7	LTR/ERV1	1	450	(0)	346457
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
1878	13.0	3.5	0.3	chr1	233706901	233707200	(15249222)	C	THE1D	LTR/ERVL-MaLR	(0)	381	72	346788
38	0.0	0.0	0.0	chr1	234491193	234491225	(14465197)	+	(AC)n	Simple_repeat	1	33	(0)	347951
23	12.6	0.0	0.0	chr1	234491226	234491260	(14465162)	+	(GA)n	Simple_repeat	1	35	(0)	347952
346	30.9	11.7	5.5	chr1	234547192	234547390	(14409032)	+	MIRb	SINE/MIR	25	237	(25)	348063
399	29.9	5.6	3.0	chr1	234980616	234980877	(13975545)	C	AmnSINE1	SINE/5S-Deu-L2	(195)	380	112	348770
4051	11.5	0.8	2.0	chr1	236351728	236352219	(12604203)	C	MER41E	LTR/ERV1	(99)	496	1	351444
1369	13.1	3.3	3.7	chr1	236352220	236352422	(12604000)	C	LTR54	LTR/ERV1	(306)	204	1	351441
1827	17.0	0.0	3.5	chr1	236352423	236352565	(12603857)	+	AluJr	SINE/Alu	1	141	(171)	351446
4382	12.6	0.0	0.3	chr1	241696323	241696958	(7259464)	C	MER41B	LTR/ERV1	(0)	634	1	359670
748	13.2	0.0	0.0	chr1	243101895	243102000	(5854422)	+	AluSz6	SINE/Alu	184	289	(23)	362075
314	20.9	0.0	0.0	chr1	243102011	243102077	(5854345)	+	L1MB8	LINE/L1	6106	6172	(6)	362076
2054	17.6	18.7	3.7	chr1	246110332	246110849	(2845573)	C	LTR18B	LTR/ERVL	(0)	614	1	366955
32	10.7	0.0	0.0	chr1	246153400	246153450	(2802972)	+	(GGAG)n	Simple_repeat	1	51	(0)	367028
4756	12.3	2.9	4.6	chr1	246418297	246418825	(2537597)	C	LTR1A2	LTR/ERV1	(9)	828	318	367424
2658	10.2	0.4	13.3	chr1	246418826	246419358	(2537064)	+	LTR7B	LTR/ERV1	1	464	(0)	367425
1164	12.8	2.5	0.0	chr1	246582357	246582512	(2373910)	C	AluSx	SINE/Alu	(16)	296	137	367720
246	18.6	0.0	0.0	chr1	246582578	246582620	(2373802)	+	MER5C1	DNA/hAT-Charlie	221	263	(0)	367721
182	19.2	10.3	0.0	chr1	247361153	247361204	(1595218)	C	OldhAT1	DNA/hAT-Ac	(869)	1979	1922	369021
203	34.8	3.5	2.6	chr10	4848769	4848883	(128948539)	+	MIR3	SINE/MIR	37	152	(56)	376999
1475	26.2	9.0	0.7	chr10	4867250	4867706	(128929716)	C	L1MD2	LINE/L1	(139)	6220	5722	377029
3434	15.2	1.2	0.5	chr10	9825470	9826030	(123971392)	+	MER61E	LTR/ERV1	1	565	(4)	384785
198	21.3	7.8	0.0	chr10	11179000	11179046	(122618376)	C	MIRc	SINE/MIR	(114)	154	104	386578
201	26.9	9.7	0.0	chr10	14325658	14325748	(119471674)	+	L2b	LINE/L2	3269	3376	(11)	392275
83	28.9	1.2	0.8	chr10	14604707	14604958	(119192464)	+	(CT)n	Simple_repeat	1	255	(0)	392731
4147	10.3	1.9	4.6	chr10	15627751	15628324	(118169098)	+	MER41B	LTR/ERV1	1	570	(64)	394578
2261	16.5	7.4	0.9	chr10	17376962	17377401	(116420021)	+	LTR7C	LTR/ERV1	1	471	(0)	397268
1813	13.4	17.1	0.8	chr10	17385379	17385754	(116411668)	C	LTR7	LTR/ERV1	(0)	450	1	397278
2873	11.3	2.5	1.5	chr10	17385755	17385917	(116411505)	+	MER4A1	LTR/ERV1	311	470	(2)	397274
2706	18.6	2.5	0.2	chr10	17425839	17426344	(116371078)	+	LTR53	LTR/ERVL	2	519	(0)	397359
779	26.0	4.0	1.8	chr10	17662596	17662818	(116134604)	+	MIR	SINE/MIR	6	233	(29)	397832
746	14.2	1.7	0.0	chr10	18658722	18658834	(115138588)	+	AluJo	SINE/Alu	1	115	(197)	399447
26	27.4	2.4	0.0	chr10	18658842	18658925	(115138497)	+	(ATGA)n	Simple_repeat	1	86	(0)	399448
889	22.9	22.0	3.5	chr10	24569310	24569688	(109227734)	+	MER54B	LTR/ERVL	1	449	(452)	408696
249	27.8	7.6	3.6	chr10	28494493	28494630	(105302792)	+	L2c	LINE/L2	3241	3384	(3)	415236
655	26.4	4.0	0.0	chr10	28734851	28735043	(105062379)	C	Tigger15a	DNA/TcMar-Tigger	(58)	657	457	415663
482	21.2	2.9	0.0	chr10	28735046	28735144	(105062278)	C	MIR	SINE/MIR	(155)	107	6	415664
2550	8.4	0.0	0.0	chr10	29005783	29006079	(104791343)	C	AluY	SINE/Alu	(14)	297	1	416125
16	10.7	0.0	0.0	chr10	29006080	29006092	(104791330)	+	(AATTTT)n	Simple_repeat	6	18	(0)	416126
195	30.3	0.0	13.6	chr10	29006141	29006228	(104791194)	C	L2b	LINE/L2	(94)	3281	3206	416127
1123	15.4	0.0	0.0	chr10	29006314	29006475	(104790947)	+	AluJb	SINE/Alu	148	309	(3)	416128
2419	11.2	0.3	0.0	chr10	29009250	29009554	(104787868)	C	AluSc	SINE/Alu	(3)	306	1	416135
199	28.2	4.5	14.1	chr10	29009555	29009596	(104787826)	+	MER5A	DNA/hAT-Charlie	125	168	(21)	416134
1274	24.4	2.2	4.8	chr10	29009605	29009979	(104787443)	C	MLT1A	LTR/ERVL-MaLR	(8)	366	2	416136
1513	7.8	5.7	4.0	chr10	34107549	34107774	(99689648)	C	MER30	DNA/hAT-Charlie	(0)	230	1	424289
2595	16.5	1.9	1.7	chr10	34107775	34107955	(99689467)	+	LTR72B	LTR/ERV1	302	481	(19)	424288
2195	12.1	0.3	1.9	chr10	34572360	34572672	(99224750)	+	AluSz	SINE/Alu	4	311	(1)	424912
30	0.0	0.0	0.0	chr10	35465906	35465938	(98331484)	+	(AG)n	Simple_repeat	1	33	(0)	426620
46	4.3	0.0	0.0	chr10	35465939	35465986	(98331436)	+	(GT)n	Simple_repeat	1	48	(0)	426621
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
1853	12.8	1.4	3.6	chr10	43418428	43418731	(90378691)	+	AluSz	SINE/Alu	8	304	(8)	433461
4627	10.8	1.1	0.2	chr10	45410801	45411428	(88385994)	C	MER41B	LTR/ERV1	(0)	634	1	436025
1083	23.8	2.9	1.9	chr10	48481311	48481580	(85315842)	+	Arthur1C	DNA/hAT-Tip100	88	360	(3)	440595
1675	22.8	4.7	0.7	chr10	48481666	48482358	(85315064)	C	L1M5	LINE/L1	(570)	5609	4885	440596
481	29.6	11.9	3.8	chr10	49183920	49184960	(84612462)	+	L1ME3G	LINE/L1	1	599	(398)	441552
1237	28.1	4.4	1.9	chr10	49260654	49261077	(84536345)	+	LTR16A	LTR/ERVL	17	451	(0)	441666
191	15.6	2.2	2.2	chr10	49261139	49261184	(84536238)	+	MIRc	SINE/MIR	178	223	(45)	441667
344	28.5	4.4	1.9	chr10	50310571	50310724	(83486698)	+	L1ME3Cz	LINE/L1	800	957	(40)	443168
293	34.6	1.5	1.5	chr10	50310764	50310895	(83486527)	+	L2c	LINE/L2	3251	3382	(5)	443166
23	21.8	0.0	0.0	chr10	50326147	50326194	(83471228)	+	A-rich	Low_complexity	1	48	(0)	443191
518	32.8	6.3	7.6	chr10	50331625	50331688	(83465734)	+	L2b	LINE/L2	2706	2765	(654)	443197
1334	15.1	17.7	2.6	chr10	50331689	50331994	(83465428)	+	MLT1A0	LTR/ERVL-MaLR	1	362	(3)	443198
1653	14.4	7.7	2.6	chr10	50358432	50358702	(83438720)	+	AluSz6	SINE/Alu	4	289	(23)	443232
2654	24.9	10.5	3.2	chr10	50578917	50580156	(83217266)	+	HAL1	LINE/L1	790	2130	(377)	443570
199	27.0	13.7	1.6	chr10	60978637	60978700	(72818722)	C	AmnSINE2	SINE/tRNA-Deu	(45)	313	241	457911
2415	9.7	13.3	1.3	chr10	64506820	64507214	(69290208)	+	LTR7	LTR/ERV1	1	450	(0)	463496
2593	12.6	11.9	0.0	chr10	72888319	72888746	(60908676)	+	LTR19A	LTR/ERV1	1	486	(0)	478225
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
191	33.9	5.7	0.9	chr10	73456053	73456168	(60341254)	+	L2	LINE/L2	2374	2495	(924)	479317
401	30.4	13.6	2.6	chr10	73456173	73456466	(60340956)	C	L2c	LINE/L2	(12)	3363	3055	479318
3521	17.0	2.8	7.0	chr10	73742860	73743582	(60053840)	C	LTR8	LTR/ERV1	(0)	691	1	479874
273	25.6	3.5	4.7	chr10	73743583	73743617	(60053805)	+	L2a	LINE/L2	3392	3426	(0)	479873
210	33.6	16.8	3.0	chr10	74021058	74021287	(59776135)	+	L2c	LINE/L2	3015	3282	(105)	480410
2319	6.9	1.4	0.0	chr10	75110824	75111112	(58686310)	C	AluSq2	SINE/Alu	(20)	293	1	482443
295	35.6	12.9	0.9	chr10	75111113	75111193	(58686229)	+	MIRb	SINE/MIR	176	259	(9)	482442
695	28.6	6.5	6.5	chr10	77896255	77896560	(55900862)	+	L1MC4	LINE/L1	7630	7941	(101)	486759
1758	10.2	8.4	1.1	chr10	77896561	77896834	(55900588)	+	AluSq2	SINE/Alu	3	298	(15)	486760
302	25.3	8.4	0.0	chr10	79347073	79347159	(54450263)	C	MamRep4096	DNA/hAT-Tip100	(0)	426	332	489468
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
429	29.6	21.4	1.2	chr10	80201226	80201570	(53595852)	+	L2	LINE/L2	2081	2514	(905)	490857
1988	11.8	0.0	0.0	chr10	84525091	84525370	(49272052)	+	MER61E	LTR/ERV1	1	280	(289)	496993
6224	6.8	3.2	0.5	chr10	84525371	84526129	(49271293)	C	LTR17	LTR/ERV1	(0)	780	1	496994
30	8.2	0.0	0.0	chr10	87879104	87879142	(45918280)	+	(TG)n	Simple_repeat	1	39	(0)	501950
2360	10.9	0.3	0.3	chr10	87879314	87879624	(45917798)	C	AluSx	SINE/Alu	(0)	312	2	501951
239	29.3	1.2	1.0	chr10	95532128	95532233	(38265189)	+	MIRb	SINE/MIR	51	156	(112)	514437
3201	7.4	0.4	11.4	chr10	101183756	101184274	(32613148)	C	LTR7B	LTR/ERV1	(2)	462	1	524619
3214	11.6	2.5	3.7	chr10	101184276	101184838	(32612584)	C	HERVH-int	LTR/ERV1	(1)	7712	7157	524619
373	26.8	18.6	0.0	chr10	102422465	102422621	(31374801)	+	MER102b	DNA/hAT-Charlie	71	263	(78)	526883
2254	12.0	11.1	3.0	chr10	103521834	103522264	(30275158)	C	LTR7Y	LTR/ERV1	(2)	470	1	529135
2053	9.4	4.3	2.3	chr10	103522327	103522625	(30274797)	+	AluSp	SINE/Alu	2	306	(7)	529136
357	15.9	1.6	0.0	chr11	224681	224743	(134861879)	+	MER68-int	LTR/ERVL	2679	2742	(248)	573097
1770	14.1	21.1	3.5	chr11	331893	332202	(134754420)	+	LTR7	LTR/ERV1	1	393	(57)	573261
2115	9.7	4.4	1.5	chr11	333767	334167	(134752455)	C	LTR7	LTR/ERV1	(2)	462	1	573267
255	28.7	6.3	1.4	chr11	355690	355901	(134730721)	C	LTR40b	LTR/ERVL	(37)	425	203	573320
2269	15.6	11.7	1.2	chr11	2331244	2331664	(132754958)	C	LTR7C	LTR/ERV1	(0)	471	1	575690
993	23.8	11.1	3.6	chr11	2331665	2331715	(132754907)	C	MLT2B1	LTR/ERVL	(312)	208	160	575689
3198	25.6	9.3	11.0	chr11	3210913	3211589	(131875033)	+	L1MEb	LINE/L1	3035	3806	(2340)	576722
2766	14.3	6.8	0.2	chr11	3211590	3212029	(131874593)	+	LTR7C	LTR/ERV1	1	471	(0)	576728
4517	4.9	1.1	0.0	chr11	3509348	3509899	(131576723)	C	LTR6B	LTR/ERV1	(0)	558	1	577132
2298	11.1	0.0	0.3	chr11	3509900	3510216	(131576406)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	577133
1623	25.6	9.4	2.8	chr11	4657682	4658253	(130428369)	+	MLT1E2	LTR/ERVL-MaLR	11	624	(3)	579034
28	0.0	0.0	0.0	chr11	5242575	5242601	(129844021)	+	(ACAT)n	Simple_repeat	1	27	(0)	579775
1100	23.5	11.2	1.5	chr11	5247162	5247498	(129839124)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	579783
18	14.0	0.0	4.7	chr11	5250977	5251019	(129835603)	+	(TTTTTG)n	Simple_repeat	1	43	(0)	579786
37	8.7	0.0	0.0	chr11	5280499	5280548	(129806074)	+	(AT)n	Simple_repeat	1	50	(0)	579817
3746	10.5	0.4	0.4	chr11	5367228	5367773	(129718849)	C	MER41A	LTR/ERV1	(8)	546	1	579913
6532	9.6	4.9	0.9	chr11	9318776	9319704	(125766918)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	585472
4081	14.0	5.5	1.3	chr11	9319705	9320031	(125766591)	C	MER50	LTR/ERV1	(391)	343	1	585471
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
588	33.6	8.3	5.4	chr11	12149088	12149866	(122936756)	C	L2c	LINE/L2	(266)	3121	2310	590330
301	30.6	6.1	1.1	chr11	12149958	12150145	(122936477)	C	L2c	LINE/L2	(1366)	2053	1856	590330
1805	16.4	11.4	0.5	chr11	14500930	14501359	(120585263)	C	L1MD2	LINE/L1	(62)	6297	5815	594062
1509	13.4	10.9	2.2	chr11	17186793	17187060	(117899562)	+	AluJb	SINE/Alu	1	294	(18)	598235
231	35.3	1.4	2.2	chr11	17187068	17187206	(117899416)	C	L2	LINE/L2	(1037)	2382	2245	598236
24	35.1	3.3	0.8	chr11	27420561	27420682	(107665940)	+	(TA)n	Simple_repeat	1	126	(0)	613906
561	34.3	13.8	2.2	chr11	34809906	34810277	(100276345)	C	L2a	LINE/L2	(122)	3304	2896	625847
550	30.5	5.4	8.5	chr11	34810280	34810680	(100275942)	C	L2a	LINE/L2	(636)	2783	2396	625847
2317	28.4	7.7	7.2	chr11	43952820	43953061	(91133561)	+	MLT1J2-int	LTR/ERVL-MaLR	920	1141	(246)	639257
4178	11.0	3.5	1.6	chr11	43953062	43953233	(91133389)	+	MER41B	LTR/ERV1	1	169	(465)	639261
2287	9.8	0.3	2.9	chr11	43953234	43953540	(91133082)	+	AluSg4	SINE/Alu	2	300	(10)	639262
4468	12.7	0.6	0.2	chr11	44530330	44530960	(90555662)	C	MER41B	LTR/ERV1	(0)	634	1	640306
726	19.8	8.0	0.0	chr11	46832586	46832757	(88253865)	C	MIR	SINE/MIR	(5)	257	71	644727
1007	21.1	0.0	0.0	chr11	46832809	46832969	(88253653)	+	AluJb	SINE/Alu	135	295	(17)	644728
2148	9.5	1.0	1.0	chr11	47767753	47768046	(87318576)	+	AluSg4	SINE/Alu	2	295	(15)	646697
207	33.3	7.1	0.0	chr11	47999401	47999478	(87087144)	C	L3	LINE/CR1	(113)	3986	3903	647328
350	23.6	8.7	9.8	chr11	47999528	47999701	(87086921)	+	MER5B	DNA/hAT-Charlie	7	178	(0)	647329
347	32.4	10.3	4.3	chr11	57658013	57658247	(77428375)	C	MIRc	SINE/MIR	(6)	262	12	654219
2392	8.0	0.0	0.7	chr11	59536789	59537089	(75549533)	C	AluSx1	SINE/Alu	(13)	299	1	656914
296	32.0	13.9	2.7	chr11	59545915	59546086	(75540536)	C	L2	LINE/L2	(768)	2651	2455	656932
1055	19.3	4.0	8.7	chr11	59546097	59546385	(75540237)	+	MLT1C	LTR/ERVL-MaLR	2	276	(191)	656934
5484	16.3	0.4	2.3	chr11	59961717	59962449	(75124173)	+	MER49	LTR/ERV1	197	914	(9)	657717
1713	16.2	1.9	0.0	chr11	62850390	62850654	(72235968)	+	AluJb	SINE/Alu	19	288	(24)	662955
2153	8.1	0.0	9.3	chr11	62850957	62851128	(72235494)	+	AluSp	SINE/Alu	132	301	(12)	662956
2046	12.0	1.7	0.7	chr11	62851138	62851429	(72235193)	+	AluSc8	SINE/Alu	1	295	(16)	662958
960	17.7	8.6	0.0	chr11	62851443	62851634	(72234988)	+	AluSx1	SINE/Alu	49	258	(54)	662959
439	22.5	13.8	3.5	chr11	62851677	62851818	(72234804)	+	AluJo	SINE/Alu	137	295	(17)	662960
13	18.7	0.0	5.0	chr11	62855797	62855836	(72230786)	+	A-rich	Low_complexity	1	40	(0)	662962
529	9.1	0.0	0.3	chr11	63534736	63534826	(71551796)	C	MER21C	LTR/ERVL	(746)	192	123	663827
3683	17.2	4.8	2.4	chr11	65141527	65142253	(69944369)	+	L1MB7	LINE/L1	5369	6111	(73)	666920
14	8.8	0.0	0.0	chr11	65425196	65425219	(69661403)	+	(CAAA)n	Simple_repeat	1	24	(0)	667513
450	30.8	13.7	5.0	chr11	65428988	65429477	(69657145)	C	L1ME4a	LINE/L1	(251)	5873	5367	667515
505	31.0	12.1	3.3	chr11	65429593	65429862	(69656760)	C	L1ME4a	LINE/L1	(891)	5255	4959	667515
339	26.9	7.7	1.2	chr11	65430028	65430148	(69656474)	+	MIRb	SINE/MIR	31	156	(112)	667517
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
213	31.4	3.4	0.0	chr11	66361417	66361502	(68725120)	C	MIR	SINE/MIR	(167)	95	7	669319
203	33.3	1.1	0.0	chr11	66361566	66361652	(68724970)	+	L2b	LINE/L2	2688	2775	(644)	669320
404	31.5	12.5	1.8	chr11	66361634	66361905	(68724717)	+	L2b	LINE/L2	3071	3375	(0)	669320
799	16.2	3.9	0.0	chr11	66694545	66694692	(68391930)	+	L1PA16	LINE/L1	6012	6165	(1)	670057
1011	24.7	3.0	4.0	chr11	66694712	66694985	(68391637)	+	LTR41C	LTR/ERVL	1	271	(430)	670058
328	33.3	7.4	4.7	chr11	67168294	67168504	(67918118)	+	L2c	LINE/L2	3130	3346	(41)	671132
321	32.5	6.7	1.6	chr11	67545479	67545606	(67541016)	+	MLT1K	LTR/ERVL-MaLR	128	262	(333)	671845
8470	0.7	0.8	0.0	chr11	67603354	67604313	(67482309)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	671981
3437	13.6	4.7	1.7	chr11	67604314	67604346	(67482276)	C	LTR26	LTR/ERV1	(572)	31	4	671980
247	36.0	9.9	1.9	chr11	67604350	67604842	(67481780)	C	L2c	LINE/L2	(222)	3165	2544	671982
415	32.7	10.4	2.5	chr11	67605626	67605829	(67480793)	+	MIRc	SINE/MIR	9	230	(38)	671984
2198	9.0	1.0	0.3	chr11	68459681	68459969	(66626653)	+	AluSq2	SINE/Alu	1	291	(22)	673465
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
2002	14.7	7.6	1.5	chr11	70057466	70057860	(65028762)	C	LTR7C	LTR/ERV1	(47)	424	4	676199
27	0.0	0.0	0.0	chr11	70057861	70057886	(65028736)	+	(ACAAA)n	Simple_repeat	1	26	(0)	676200
3858	12.1	0.6	0.0	chr11	70057895	70058531	(65028091)	C	HERVH-int	LTR/ERV1	(21)	7692	7052	676199
2242	12.0	0.0	0.3	chr11	71712560	71712876	(63373746)	+	HERVS71-int	LTR/ERV1	8594	8909	(69)	678661
4505	4.9	1.4	0.0	chr11	71712877	71713426	(63373196)	+	LTR6B	LTR/ERV1	1	558	(0)	678662
249	28.9	13.5	0.0	chr11	72113181	72113270	(62973352)	C	L2b	LINE/L2	(33)	3342	3239	679367
593	28.8	11.2	6.8	chr11	74070757	74071175	(61015447)	+	L2c	LINE/L2	2925	3341	(46)	683351
467	33.7	5.8	4.0	chr11	74460575	74460976	(60625646)	C	L2	LINE/L2	(358)	3061	2652	684121
619	29.9	6.0	3.7	chr11	75099928	75100385	(59986237)	C	L1ME3G	LINE/L1	(75)	817	341	685330
1350	14.4	2.3	0.0	chr11	75104042	75104249	(59982373)	+	AluJr	SINE/Alu	86	298	(14)	685336
429	15.9	7.0	0.0	chr11	75104261	75104367	(59982255)	+	L2	LINE/L2	1708	1822	(1597)	685335
346	25.6	5.2	1.6	chr11	75104506	75104678	(59981944)	+	L1MC5	LINE/L1	7362	7472	(1832)	685337
5187	7.2	1.8	5.6	chr11	75331794	75331867	(59754755)	+	MER4E1	LTR/ERV1	91	157	(624)	685811
1997	12.5	18.0	2.9	chr11	75331868	75332247	(59754375)	+	LTR7	LTR/ERV1	1	450	(0)	685814
439	33.0	11.9	3.7	chr11	76702315	76702720	(58383902)	+	L2b	LINE/L2	2932	3375	(0)	688502
1924	24.4	9.1	0.2	chr11	76702746	76703245	(58383377)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	688503
3998	13.0	2.7	3.8	chr11	76825703	76826412	(58260210)	+	MER4D0	LTR/ERV1	1	702	(170)	688744
4399	7.7	1.2	1.2	chr11	77549596	77550174	(57536448)	+	MER84-int	LTR/ERV1	4301	4879	(75)	690145
2411	14.9	7.4	1.4	chr11	77550175	77550616	(57536006)	+	LTR7C	LTR/ERV1	1	471	(0)	690146
2434	14.6	8.5	1.6	chr11	77555270	77555707	(57530915)	+	LTR7C	LTR/ERV1	1	471	(0)	690147
3422	10.4	0.4	0.2	chr11	78086563	78087032	(56999590)	+	LTR7C	LTR/ERV1	1	471	(0)	691312
326	32.2	4.3	3.7	chr11	91791245	91791269	(43295353)	C	MER103C	DNA/hAT-Charlie	(109)	188	165	713234
2020	16.7	0.3	0.0	chr11	93717912	93718210	(41368412)	C	AluJo	SINE/Alu	(12)	300	1	716038
640	17.0	7.5	3.6	chr11	93729191	93729330	(41357292)	+	AluJb	SINE/Alu	43	188	(124)	716062
300	21.9	2.1	0.0	chr11	93729331	93729392	(41357230)	+	AluJb	SINE/Alu	220	284	(17)	716062
16	4.5	0.0	0.0	chr11	95147100	95147122	(39939500)	+	(GTTT)n	Simple_repeat	1	23	(0)	718193
216	38.4	7.0	0.0	chr11	95153386	95153518	(39933104)	C	MIRc	SINE/MIR	(61)	207	65	718205
538	29.6	8.5	0.9	chr11	95153531	95153758	(39932864)	C	MIRb	SINE/MIR	(20)	248	2	718206
1448	22.4	11.1	6.1	chr11	97963447	97964133	(37122489)	C	MER61E	LTR/ERV1	(2)	777	1	721865
1432	23.5	7.1	7.4	chr11	97973243	97973850	(37112772)	C	MER61E	LTR/ERV1	(29)	616	7	721869
1326	23.2	3.0	8.2	chr11	102341892	102342308	(32744314)	C	LTR55	LTR/ERVL?	(8)	540	152	727795
38	0.0	0.0	0.0	chr11	102342309	102342341	(32744281)	+	(TG)n	Simple_repeat	1	33	(0)	727796
51	0.0	0.0	0.0	chr11	102342345	102342388	(32744234)	+	(TA)n	Simple_repeat	1	44	(0)	727797
4019	23.7	5.5	1.1	chr11	113663695	113664595	(21422027)	+	FordPrefect	DNA/hAT-Tip100	659	1601	(82)	744949
3936	16.4	1.8	2.2	chr11	113664596	113664737	(21421885)	C	L1MB7	LINE/L1	(0)	6682	6540	744950
2057	9.3	21.3	0.6	chr11	121298713	121299068	(13787554)	C	LTR7	LTR/ERV1	(0)	450	1	757892
278	34.4	6.2	0.0	chr11	123718122	123718243	(11368379)	+	MIRb	SINE/MIR	35	164	(104)	762058
300	20.3	1.5	1.5	chr11	124482042	124482106	(10604516)	C	MIR	SINE/MIR	(10)	252	188	763098
567	26.9	7.7	0.6	chr11	125273637	125273793	(9812829)	+	MIR3	SINE/MIR	33	201	(7)	764249
6271	9.9	1.8	1.3	chr11	125552167	125553314	(9533308)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	1769	764722
10111	14.6	2.1	4.4	chr11	125553312	125554733	(9531889)	C	HUERS-P3b-int	LTR/ERV1	(7267)	1652	254	764722
302	32.1	4.4	0.0	chr12	1304589	1304697	(131970612)	C	Tigger13a	DNA/TcMar-Tigger	(653)	118	5	780452
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
1821	19.8	4.7	10.8	chr12	7241875	7242152	(126033157)	C	L1ME3	LINE/L1	(166)	5996	5705	790140
3236	16.0	13.5	0.6	chr12	7242153	7242786	(126032523)	+	LTR9A1	LTR/ERV1	1	728	(0)	790141
2101	17.0	6.3	1.2	chr12	9751687	9751892	(123523417)	C	MSTA	LTR/ERVL-MaLR	(0)	428	221	794270
31	3.3	0.0	0.0	chr12	9751893	9751923	(123523386)	+	(AG)n	Simple_repeat	1	31	(0)	794271
2101	17.0	6.3	1.2	chr12	9751924	9752122	(123523187)	C	MSTA	LTR/ERVL-MaLR	(208)	220	2	794270
2426	14.4	7.2	0.7	chr12	14724891	14725330	(118549979)	C	LTR7C	LTR/ERV1	(0)	471	1	801823
7982	18.7	3.7	6.4	chr12	14725338	14726762	(118548547)	C	L1MDa	LINE/L1	(1661)	4876	3530	801813
3772	12.0	1.6	2.5	chr12	22899020	22899590	(110375719)	C	MER61E	LTR/ERV1	(3)	566	1	812855
183	28.2	4.9	8.2	chr12	31618117	31618201	(101657108)	+	MIR	SINE/MIR	169	250	(12)	825637
1905	18.6	6.1	9.8	chr12	31618246	31618390	(101656919)	+	LTR54	LTR/ERV1	1	147	(363)	825642
3758	13.3	2.7	0.0	chr12	31618391	31618969	(101656340)	C	MER41E	LTR/ERV1	(0)	595	1	825643
1260	9.2	0.6	0.0	chr12	32005392	32005554	(101269755)	+	AluSx1	SINE/Alu	133	296	(16)	826558
4308	12.8	0.3	0.5	chr12	32021013	32021530	(101253779)	C	MER41B	LTR/ERV1	(117)	517	2	826606
2657	17.6	4.7	11.4	chr12	32021531	32021598	(101253711)	C	MER67C	LTR/ERV1	(328)	383	363	826605
197	31.2	5.9	1.5	chr12	48852554	48852618	(84422691)	C	MIRb	SINE/MIR	(81)	187	120	845901
2233	11.5	0.3	1.3	chr12	49090641	49090667	(84184642)	C	AluSz	SINE/Alu	(1)	311	286	846375
15	13.8	0.0	2.9	chr12	50050777	50050810	(83224499)	+	(CCCCTC)n	Simple_repeat	1	34	(0)	848331
2235	10.8	0.0	0.3	chr12	51021344	51021639	(82253670)	+	AluSz6	SINE/Alu	1	295	(17)	850427
2578	4.7	0.0	0.7	chr12	53310278	53310578	(79964731)	+	AluSc	SINE/Alu	1	299	(10)	854448
2457	14.4	7.4	0.5	chr12	54736203	54736640	(78538669)	+	LTR7C	LTR/ERV1	1	471	(0)	856934
2281	11.3	2.3	0.0	chr12	57517816	57518117	(75757192)	C	AluSc	SINE/Alu	(0)	309	1	861456
563	16.3	0.0	1.0	chr12	57861898	57861996	(75413313)	C	MLT1N2	LTR/ERVL-MaLR	(4)	558	461	861944
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
385	22.8	1.1	0.0	chr12	66131210	66131301	(67144008)	+	L1MA10	LINE/L1	6224	6316	(18)	873859
893	16.4	1.9	0.6	chr12	68351935	68352093	(64923216)	+	MLT1A0	LTR/ERVL-MaLR	1	161	(204)	877220
670	14.3	1.9	0.9	chr12	68352094	68352199	(64923110)	+	MER41-int	LTR/ERV1	5840	5946	(0)	877221
3886	10.1	2.7	1.1	chr12	68352200	68352738	(64922571)	+	MER41B	LTR/ERV1	1	548	(86)	877221
1993	9.8	5.2	0.7	chr12	69624340	69624616	(63650693)	C	AluSc5	SINE/Alu	(19)	290	1	879618
3977	12.0	1.1	0.0	chr12	70090836	70091394	(63183915)	C	MER61E	LTR/ERV1	(4)	565	1	880366
2218	11.8	1.9	1.0	chr12	76036791	76037095	(57238214)	+	AluSx	SINE/Alu	1	308	(4)	888515
211	26.8	1.8	1.8	chr12	92404962	92405018	(40870291)	C	L3	LINE/CR1	(0)	4099	4043	911480
2300	13.6	10.8	1.2	chr12	92957049	92957473	(40317836)	C	LTR7C	LTR/ERV1	(0)	471	1	912425
93	1.1	1.1	1.1	chr12	94144353	94144446	(39130863)	+	(TATGC)n	Simple_repeat	1	95	(0)	914745
253	28.3	6.4	15.2	chr12	96906710	96907005	(36368304)	+	L2b	LINE/L2	3139	3396	(30)	919870
2319	15.1	7.2	1.4	chr12	100582022	100582464	(32692845)	C	LTR7C	LTR/ERV1	(0)	471	1	925860
4232	6.0	4.3	0.0	chr12	110271335	110271864	(23003445)	C	MER41A	LTR/ERV1	(0)	554	1	944394
255	29.8	0.0	0.0	chr12	110271866	110271922	(23003387)	C	L2a	LINE/L2	(95)	3331	3275	944395
1809	13.9	8.4	0.0	chr12	110405065	110405359	(22869950)	C	LTR2	LTR/ERV1	(1)	462	141	944654
529	10.9	18.6	1.9	chr12	110405358	110405460	(22869849)	C	LTR7	LTR/ERV1	(326)	124	1	944653
2836	11.1	0.7	2.9	chr12	110405461	110405915	(22869394)	C	HERVH-int	LTR/ERV1	(0)	7713	7269	944653
2448	6.6	18.7	0.5	chr12	110410701	110411068	(22864241)	C	LTR7	LTR/ERV1	(0)	450	1	944653
1165	8.8	0.7	0.0	chr12	110411069	110411215	(22864094)	C	AluSp	SINE/Alu	(165)	148	1	944656
2813	0.7	0.3	0.0	chr12	110418061	110418360	(22856949)	C	AluYa5	SINE/Alu	(10)	301	1	944683
3622	6.7	1.4	3.6	chr12	110418361	110418632	(22856677)	C	LTR15	LTR/ERV1	(221)	272	1	944682
317	25.7	0.0	1.3	chr12	116197137	116197211	(17078098)	+	UCON94	Unknown	43	116	(17)	957508
232	31.6	7.1	0.0	chr12	116197364	116197480	(17077829)	C	UCON94	Unknown	(0)	133	8	957509
339	30.2	2.4	4.7	chr12	119665476	119665645	(13609664)	C	Helitron3Na_Mam	RC/Helitron	(88)	398	233	965288
2028	12.7	1.4	0.7	chr12	120195650	120195940	(13079369)	+	AluSg	SINE/Alu	1	293	(17)	966422
1628	12.9	0.0	7.9	chr12	120195941	120196064	(13079245)	+	AluSx1	SINE/Alu	134	257	(55)	966421
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
325	22.2	0.0	1.4	chr12	120540295	120540367	(12734942)	C	MER5B	DNA/hAT-Charlie	(104)	74	3	967335
2452	6.1	0.0	1.6	chr12	121628966	121629276	(11646033)	C	AluY	SINE/Alu	(5)	306	1	969873
1136	26.4	7.7	1.0	chr12	122064182	122064568	(11210741)	+	MLT1K	LTR/ERVL-MaLR	145	559	(36)	971015
2181	14.6	12.7	1.4	chr12	124107089	124107505	(9167804)	C	LTR7C	LTR/ERV1	(0)	471	1	975467
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
300	34.8	5.4	7.1	chr12	124940953	124941164	(8334145)	C	L1MC5	LINE/L1	(2137)	7167	6963	977204
1633	13.4	2.6	3.4	chr12	124941165	124941432	(8333877)	C	AluJr	SINE/Alu	(44)	268	3	977205
3989	13.4	2.0	0.2	chr12	126907913	126908534	(6366775)	C	MER41B	LTR/ERV1	(0)	634	1	980595
3510	7.7	1.3	0.6	chr12	127157602	127158069	(6117240)	+	LTR7C	LTR/ERV1	1	471	(0)	981004
3612	6.0	1.1	0.8	chr12	128019852	128020321	(5254988)	C	LTR7C	LTR/ERV1	(0)	471	1	982447
977	31.3	10.2	0.7	chr12	128020324	128020742	(5254567)	C	LTR16B	LTR/ERVL	(0)	463	1	982448
218	30.2	1.6	0.0	chr12	131000169	131000231	(2275078)	+	MIRc	SINE/MIR	176	239	(29)	987620
4197	13.9	2.4	1.9	chr12	131362184	131362814	(1912495)	C	MER41B	LTR/ERV1	(0)	634	1	988030
2023	29.7	4.3	5.0	chr12	131362815	131362842	(1912467)	+	L1MC5a	LINE/L1	2448	2472	(305)	988027
2089	15.9	3.3	0.3	chr12	131362843	131363196	(1912113)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	988031
3692	9.8	7.8	0.2	chr12	133079464	133079975	(195334)	+	MER41A	LTR/ERV1	1	554	(0)	990480
1812	17.4	17.1	5.5	chr13	21522864	21523319	(92841009)	+	MLT2B1	LTR/ERVL	1	520	(0)	996276
1718	16.7	0.9	0.6	chr13	27138393	27138711	(87225617)	C	LTR47A2	LTR/ERVL	(112)	320	1	1004378
234	26.8	2.3	4.4	chr13	27138748	27138837	(87225491)	C	X7A_LINE	LINE/CR1	(164)	103	16	1004380
1671	13.0	0.4	0.4	chr13	45123093	45123331	(69240997)	+	7SK	RNA	1	239	(92)	1031634
2145	14.9	0.0	0.7	chr13	45123346	45123647	(69240681)	+	AluJr	SINE/Alu	1	300	(12)	1031635
8100	19.8	4.7	1.2	chr13	50533239	50535632	(63828696)	C	L1MB7	LINE/L1	(232)	6450	3951	1040261
2078	22.8	5.6	7.6	chr13	64274384	64275072	(50089256)	+	MER61E	LTR/ERV1	1	776	(3)	1058319
619	25.9	8.4	4.4	chr13	80680571	80680910	(33683418)	C	HAL1	LINE/L1	(17)	2490	2136	1080612
261	31.0	10.3	0.0	chr13	80680941	80681053	(33683275)	+	L2a	LINE/L2	3301	3426	(0)	1080613
523	5.9	0.0	0.0	chr13	80869803	80869870	(33494458)	C	MER41A	LTR/ERV1	(91)	463	396	1080834
1723	30.4	9.6	6.5	chr13	80869876	80871158	(33493170)	C	HAL1	LINE/L1	(324)	2183	811	1080833
332	36.1	0.6	1.8	chr13	89868832	89869000	(24495328)	+	MIR	SINE/MIR	54	220	(42)	1092203
250	31.3	8.4	6.1	chr13	90010394	90010583	(24353745)	+	MIRb	SINE/MIR	9	203	(5)	1092392
2227	16.0	0.6	0.3	chr13	90272825	90273187	(24091141)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1092719
1503	19.2	10.1	0.6	chr13	90310151	90310342	(24053986)	+	MLT1A0	LTR/ERVL-MaLR	139	364	(1)	1092763
1950	27.2	4.4	4.7	chr13	90310343	90311000	(24053328)	+	MLT1E1A	LTR/ERVL-MaLR	25	680	(0)	1092769
2132	19.8	3.5	0.6	chr13	90342232	90342735	(24021593)	+	L1MA4	LINE/L1	6480	6998	(4)	1092797
2225	18.5	2.8	2.3	chr13	90373064	90373495	(23990833)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	1	1092848
6913	23.4	5.3	5.6	chr13	90426694	90427351	(23936977)	C	L1MCb	LINE/L1	(1584)	4980	4276	1092910
309	26.9	4.0	8.7	chr13	90465141	90465370	(23898958)	+	MER58D	DNA/hAT-Charlie	1	381	(5)	1092964
547	23.3	16.5	1.0	chr13	90507380	90507787	(23856541)	+	L1MEc	LINE/L1	2096	2561	(3758)	1093023
834	18.7	2.8	13.4	chr13	90568040	90568323	(23796005)	C	L1MA9	LINE/L1	(1)	6311	6059	1093079
1726	21.0	11.1	1.6	chr13	90568377	90568874	(23795454)	C	L1MD	LINE/L1	(1221)	4925	4375	1093080
24	34.1	0.0	0.0	chr13	90610581	90610661	(23753667)	+	(AT)n	Simple_repeat	1	81	(0)	1093134
250	28.4	4.7	1.9	chr13	90610934	90611037	(23753291)	C	L1MEd	LINE/L1	(6304)	782	676	1093135
180	19.7	14.5	5.3	chr13	90689195	90689269	(23675059)	+	L2	LINE/L2	188	270	(3149)	1093242
11709	18.2	4.6	2.1	chr13	90783809	90786087	(23578241)	C	L1MA7	LINE/L1	(1410)	4733	2388	1093374
2961	3.9	0.0	0.0	chr13	90961722	90962077	(23402251)	+	L1PA5	LINE/L1	5793	6148	(6)	1093589
2395	21.1	4.1	3.0	chr13	91097198	91097708	(23266620)	+	MER68	LTR/ERVL	37	563	(0)	1093779
3845	24.6	14.6	3.7	chr13	91097709	91099245	(23265083)	C	Charlie2a	DNA/hAT-Charlie	(1106)	1755	2	1093777
1018	18.2	9.3	1.4	chr13	91570271	91570487	(22793841)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	1094435
1066	26.6	6.0	6.0	chr13	91649917	91650380	(22713948)	C	L1MD2	LINE/L1	(0)	6359	5896	1094551
17	4.0	0.0	3.6	chr13	91650521	91650548	(22713780)	+	(AAAAC)n	Simple_repeat	1	28	(0)	1094552
15	24.0	0.0	4.1	chr13	91780454	91780459	(22583869)	+	(TTTC)n	Simple_repeat	1	48	(0)	1094733
15	14.5	2.4	4.7	chr13	91780460	91780501	(22583827)	+	(TCCT)n	Simple_repeat	1	43	(0)	1094734
1787	28.6	10.2	3.3	chr13	91819459	91820681	(22543647)	C	L1ME3B	LINE/L1	(267)	5975	4664	1094792
22122	8.1	3.0	0.9	chr13	92293450	92294813	(22069515)	C	L1PB1	LINE/L1	(1749)	5113	3754	1095387
662	27.4	13.4	1.3	chr13	92494889	92495280	(21869048)	C	L1MEd	LINE/L1	(5323)	1763	1317	1095652
14	19.5	0.0	6.4	chr13	92602067	92602113	(21762215)	+	(TTAA)n	Simple_repeat	1	47	(0)	1095788
456	23.7	0.0	0.0	chr13	92614297	92614389	(21749939)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	380	1095807
317	29.6	3.6	8.0	chr13	92616774	92616949	(21747379)	+	L1M5	LINE/L1	2453	2620	(3526)	1095813
3791	6.2	0.2	0.2	chr13	110957367	110957837	(3406491)	C	LTR7C	LTR/ERV1	(0)	471	1	1121987
11208	10.4	4.8	1.5	chr13	110962667	110963654	(3400674)	+	MER41-int	LTR/ERV1	4951	5944	(2)	1121988
3830	12.7	0.2	1.4	chr13	110963655	110964213	(3400115)	+	MER41A	LTR/ERV1	1	552	(2)	1121988
2451	14.4	7.0	1.1	chr13	111062980	111063422	(3300906)	+	LTR7C	LTR/ERV1	1	471	(0)	1122111
2182	9.1	19.1	0.8	chr14	20494772	20495138	(86548580)	C	LTR7	LTR/ERV1	(0)	450	1	1128146
1248	17.7	6.0	4.6	chr14	20495139	20495230	(86548488)	C	AluJb	SINE/Alu	(215)	97	6	1128145
740	0.0	0.0	0.0	chr14	20625370	20625451	(86418267)	+	tRNA-Leu-CTA_	tRNA	1	82	(3)	1128366
2206	14.9	11.9	0.9	chr14	20700836	20701254	(86342464)	+	LTR7C	LTR/ERV1	1	471	(0)	1128479
3477	13.1	0.6	1.1	chr14	20705620	20706160	(86337558)	+	HERVH-int	LTR/ERV1	7176	7713	(0)	1128480
2313	14.4	11.9	0.7	chr14	20706162	20706579	(86337139)	+	LTR7C	LTR/ERV1	1	471	(0)	1128480
2561	13.5	7.4	0.5	chr14	21796229	21796666	(85247052)	+	LTR7C	LTR/ERV1	1	471	(0)	1130393
2398	7.1	0.0	0.3	chr14	23007871	23008180	(84035538)	+	AluSq2	SINE/Alu	1	309	(4)	1132132
959	19.9	3.6	0.0	chr14	23279786	23279946	(83763772)	C	FAM	SINE/Alu	(18)	167	1	1132612
3556	9.2	0.4	0.0	chr14	23939576	23940044	(83103674)	C	LTR7C	LTR/ERV1	(0)	471	1	1133572
1599	24.7	8.1	1.7	chr14	24425223	24425683	(82618035)	+	MLT1J	LTR/ERVL-MaLR	12	504	(8)	1134251
4037	9.0	1.4	3.1	chr14	32020721	32021296	(75022422)	C	MER61E	LTR/ERV1	(3)	566	1	1144530
627	25.7	4.9	0.0	chr14	36264598	36264772	(70778946)	+	MLT1J	LTR/ERVL-MaLR	1	184	(328)	1151352
275	29.5	14.0	4.9	chr14	36264798	36265043	(70778675)	+	MLT1J	LTR/ERVL-MaLR	241	512	(0)	1151352
2886	29.1	4.5	1.4	chr14	44404704	44405638	(62638080)	C	L4_A_Mam	LINE/RTE-X	(99)	4891	3927	1161722
2488	6.9	0.7	26.9	chr14	44450078	44450708	(62593010)	C	LTR7B	LTR/ERV1	(0)	464	1	1161775
273	26.7	1.1	10.0	chr14	50321259	50321358	(56722360)	C	MIR3	SINE/MIR	(25)	183	93	1169766
2264	11.3	0.0	0.0	chr14	50927217	50927517	(56116201)	C	AluSx1	SINE/Alu	(4)	308	8	1170693
1939	16.9	4.2	1.4	chr14	61104356	61104722	(45938996)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	13	1185992
2101	10.3	7.0	0.0	chr14	64362980	64363270	(42680448)	+	AluSp	SINE/Alu	1	313	(0)	1191134
4404	11.3	1.9	0.2	chr14	64363425	64364047	(42679671)	+	MER41B	LTR/ERV1	1	634	(0)	1191135
198	34.3	2.9	4.7	chr14	68786803	68786909	(38256809)	C	L3	LINE/CR1	(87)	4012	3908	1198270
303	14.6	0.0	0.0	chr14	72907419	72907465	(34136253)	C	FLAM_C	SINE/Alu	(185)	117	71	1205057
3767	6.1	2.1	0.0	chr14	72907466	72907924	(34135794)	+	MER41A	LTR/ERV1	1	469	(85)	1205058
1895	12.5	18.2	1.9	chr14	73133662	73134036	(33909682)	C	LTR7	LTR/ERV1	(0)	450	1	1205584
2389	9.2	0.7	0.0	chr14	77414176	77414478	(29629240)	C	AluY	SINE/Alu	(6)	305	1	1214161
318	25.3	13.2	0.6	chr14	91267849	91268007	(15775711)	C	L2c	LINE/L2	(936)	2483	2302	1235428
2102	10.0	0.7	0.0	chr14	91268100	91268400	(15775318)	+	LTR62	LTR/ERVL	2	304	(405)	1235437
1054	30.1	12.8	0.9	chr14	101687842	101688267	(5355451)	+	LTR16C	LTR/ERVL	1	484	(5)	1253495
3506	13.9	4.3	0.0	chr14	101688283	101688837	(5354881)	+	LTR19B	LTR/ERV1	1	580	(0)	1253496
2595	8.9	0.0	3.0	chr14	102533654	102534023	(4509695)	C	MER41A	LTR/ERV1	(169)	385	21	1255114
685	17.0	4.3	0.0	chr14	102534024	102534135	(4509583)	+	AluJo	SINE/Alu	13	129	(183)	1255116
2411	6.5	2.0	0.0	chr14	102534144	102534437	(4509281)	+	AluY	SINE/Alu	2	301	(10)	1255117
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
2719	13.7	1.8	3.1	chr15	29519313	29519731	(72471458)	+	Tigger2	DNA/TcMar-Tigger	2267	2685	(33)	1275558
2258	12.7	14.3	1.0	chr15	29519732	29520136	(72471053)	+	LTR7C	LTR/ERV1	3	470	(1)	1275559
4217	11.9	0.2	4.1	chr15	34656194	34656851	(67334338)	+	MER41B	LTR/ERV1	1	632	(2)	1283172
1985	15.7	4.9	11.4	chr15	39399723	39400247	(62590942)	C	LTR54B	LTR/ERV1	(0)	498	10	1289637
1505	18.2	10.7	7.2	chr15	39400245	39400675	(62590514)	C	MER31B	LTR/ERV1	(18)	448	1	1289638
1416	13.1	0.0	0.0	chr15	41131098	41131295	(60859894)	+	AluSx	SINE/Alu	29	226	(86)	1292575
3031	8.2	0.4	11.3	chr15	41131296	41131816	(60859373)	+	LTR7B	LTR/ERV1	1	464	(0)	1292576
2094	9.3	19.1	0.6	chr15	41285321	41285686	(60705503)	C	LTR7	LTR/ERV1	(0)	450	1	1292974
428	21.8	10.1	3.9	chr15	41285691	41285819	(60705370)	+	Charlie4z	DNA/hAT-Charlie	30	167	(0)	1292975
2224	11.5	2.0	0.3	chr15	44530247	44530542	(57460647)	+	AluSz	SINE/Alu	1	301	(11)	1299103
1071	16.7	0.0	0.0	chr15	56735480	56735641	(45255548)	+	AluJo	SINE/Alu	136	297	(15)	1317509
887	13.8	9.7	4.9	chr15	56735646	56735850	(45255339)	C	LTR54	LTR/ERV1	(277)	233	18	1317508
2333	9.8	1.2	0.0	chr15	56735851	56736185	(45255004)	+	L1PB1	LINE/L1	5811	6149	(2)	1317510
3474	13.1	4.0	1.1	chr15	58352020	58352550	(43638639)	C	MER41B	LTR/ERV1	(87)	547	1	1320027
1668	8.0	1.4	0.0	chr15	58352551	58352763	(43638426)	C	MER41-int	LTR/ERV1	(2)	5944	5729	1320027
4460	8.8	0.0	0.4	chr15	63226696	63227251	(38763938)	C	MER41A	LTR/ERV1	(0)	554	1	1328196
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
4640	12.0	0.0	0.3	chr15	66624022	66624655	(35366534)	+	MER41B	LTR/ERV1	3	634	(0)	1335108
282	34.2	15.6	1.2	chr15	74389383	74389628	(27601561)	C	L2a	LINE/L2	(85)	3341	3054	1348752
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
3945	13.8	9.0	4.3	chr15	75065784	75066524	(26924665)	C	LTR19C	LTR/ERV1	(0)	779	1	1350108
2227	10.4	0.3	0.0	chr15	82645156	82645452	(19345737)	C	AluSx1	SINE/Alu	(14)	298	1	1363208
2215	23.4	5.7	8.2	chr15	83461927	83462523	(18528666)	+	MER65-int	LTR/ERV1	3635	4215	(656)	1364663
1393	28.0	6.3	2.1	chr15	83462541	83463011	(18528178)	+	MER65-int	LTR/ERV1	4380	4871	(0)	1364663
494	33.1	6.4	7.5	chr15	88537760	88538108	(13453081)	+	L2b	LINE/L2	3030	3374	(1)	1372565
3776	6.3	9.0	0.0	chr15	88538134	88538641	(13452548)	+	LTR6B	LTR/ERV1	1	558	(0)	1372566
277	36.4	5.2	2.7	chr15	90598537	90598835	(11392354)	C	L2a	LINE/L2	(831)	2588	2282	1376700
3280	13.7	2.6	0.6	chr15	90648416	90648950	(11342239)	+	MER41B	LTR/ERV1	2	547	(87)	1376776
456	31.5	5.6	4.5	chr15	90901701	90901818	(11089371)	+	L1ME4c	LINE/L1	282	409	(421)	1377331
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
2499	14.7	7.5	0.5	chr15	92779720	92780156	(9211033)	C	LTR7C	LTR/ERV1	(1)	470	1	1380424
234	33.7	7.3	4.5	chr15	96273842	96274040	(5717149)	+	L2b	LINE/L2	3148	3352	(23)	1385647
2148	8.1	6.1	1.4	chr16	138924	139219	(90199126)	+	AluSc8	SINE/Alu	1	311	(0)	1394235
1136	13.8	0.0	1.2	chr16	144669	144835	(90193510)	+	AluSx	SINE/Alu	134	298	(14)	1394246
1955	22.5	2.4	3.9	chr16	144861	145323	(90193022)	C	L1MB5	LINE/L1	(9)	6165	5710	1394247
2430	9.7	0.0	0.0	chr16	2140427	2140735	(88197610)	+	AluSc5	SINE/Alu	1	309	(0)	1396944
1792	19.8	7.4	3.0	chr16	10339645	10340071	(79998274)	C	LTR7C	LTR/ERV1	(0)	471	25	1413271
578	19.3	1.2	12.5	chr16	10340121	10340149	(79998196)	C	L1ME2	LINE/L1	(0)	6179	6152	1413272
3747	10.0	6.4	0.7	chr16	10340150	10340711	(79997634)	+	LTR4	LTR/ERV1	1	596	(0)	1413273
2203	11.3	0.0	0.0	chr16	10361841	10362124	(79976221)	C	AluSz	SINE/Alu	(28)	284	1	1413335
1624	21.8	6.2	10.1	chr16	10362125	10362571	(79975774)	C	LTR77	LTR/ERV1	(178)	444	2	1413332
972	18.7	0.0	0.0	chr16	14289639	14289804	(76048541)	C	AluJo	SINE/Alu	(10)	302	137	1421779
248	22.9	1.6	0.0	chr16	14289896	14289956	(76048389)	+	MamGypLTR3	LTR/Gypsy	598	659	(235)	1421780
234	27.4	6.2	5.4	chr16	14289984	14290095	(76048250)	+	MIR1_Amn	SINE/MIR	84	196	(34)	1421781
568	20.6	5.5	12.4	chr16	15576553	15576746	(74761599)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	285	1424751
3137	18.8	2.6	1.9	chr16	15576752	15577391	(74760954)	C	LTR9D	LTR/ERV1	(0)	645	1	1424752
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
341	21.6	1.0	5.8	chr16	21191689	21191791	(69146554)	+	L1ME3Cz	LINE/L1	1	98	(899)	1437385
673	19.6	8.1	11.0	chr16	21191792	21192053	(69146292)	C	MLT1A0	LTR/ERVL-MaLR	(134)	231	1	1437386
229	19.6	2.1	0.0	chr16	23557030	23557075	(66781270)	+	MIR1_Amn	SINE/MIR	104	150	(80)	1442574
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
330	21.3	13.9	11.0	chr16	23597463	23597585	(66740760)	+	HAL1b	LINE/L1	1844	1991	(430)	1442649
2167	11.1	0.0	0.0	chr16	25213319	25213598	(65124747)	C	AluSg	SINE/Alu	(29)	281	2	1446486
3911	11.0	3.2	0.2	chr16	25553531	25554078	(64784267)	C	MER61E	LTR/ERV1	(4)	565	1	1447246
289	26.6	1.2	0.0	chr16	30092840	30092918	(60245427)	C	MIRc	SINE/MIR	(77)	191	112	1457246
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11359	12.0	0.1	0.4	chr16	31607906	31609056	(58729289)	+	L1PA8A	LINE/L1	3	1160	(5323)	1460611
2270	14.2	11.7	2.1	chr16	31609057	31609479	(58728866)	+	LTR7C	LTR/ERV1	3	471	(0)	1460612
650	31.9	11.4	3.4	chr16	47391898	47392131	(42946214)	C	L2a	LINE/L2	(1)	3425	3176	1467115
903	13.5	0.0	0.8	chr16	47392132	47392257	(42946088)	+	AluJo	SINE/Alu	1	125	(187)	1467116
650	29.2	10.1	2.1	chr16	47392258	47392530	(42945815)	C	L2a	LINE/L2	(251)	3175	2874	1467115
256	36.5	0.0	0.0	chr16	57519725	57519828	(32818517)	C	MER5A	DNA/hAT-Charlie	(50)	139	36	1485228
3900	11.0	2.3	1.4	chr16	65768863	65769426	(24568919)	C	MER61E	LTR/ERV1	(0)	569	1	1498482
498	27.1	5.3	6.8	chr16	72014240	72014429	(18323916)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	1510832
2490	15.9	6.8	0.7	chr16	78413893	78414334	(11924011)	+	LTR7C	LTR/ERV1	1	471	(0)	1521682
432	22.2	14.9	1.1	chr16	81338910	81339127	(8999218)	+	MER5C	DNA/hAT-Charlie	4	261	(2)	1527078
40	0.0	0.0	0.0	chr16	85050326	85050362	(5287983)	+	(TATT)n	Simple_repeat	1	37	(0)	1534089
1793	17.4	0.0	0.7	chr16	87778561	87778854	(2559491)	C	AluJr	SINE/Alu	(16)	296	5	1539048
286	25.4	7.1	7.1	chr16	88809011	88809074	(1529271)	+	MLT1D	LTR/ERVL-MaLR	115	176	(451)	1540475
333	22.7	18.5	0.0	chr16	88809124	88809264	(1529081)	+	MLT1D	LTR/ERVL-MaLR	296	468	(37)	1540475
12	16.5	0.0	0.0	chr16	89658319	89658345	(680000)	+	(CAGG)n	Simple_repeat	1	27	(0)	1541617
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
801	6.4	0.0	0.0	chr17	5239744	5239837	(78017604)	+	AluSg7	SINE/Alu	1	94	(215)	1554700
897	18.3	5.0	0.5	chr17	5239873	5240064	(78017377)	+	LTR7C	LTR/ERV1	25	225	(246)	1554701
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
4156	13.4	7.3	0.6	chr17	11908402	11909062	(71348379)	C	LTR62	LTR/ERVL	(0)	709	1	1567241
1192	13.5	0.0	2.9	chr17	11909063	11909172	(71348269)	C	L1MA5A	LINE/L1	(95)	6202	6094	1567240
2906	12.8	7.2	0.0	chr17	13928566	13929002	(69328439)	C	LTR7C	LTR/ERV1	(0)	471	1	1570602
2084	9.9	6.3	4.1	chr17	13929003	13929108	(69328333)	C	AluSx	SINE/Alu	(206)	106	1	1570601
2793	11.9	0.8	2.2	chr17	16493424	16493673	(66763768)	C	MER31A	LTR/ERV1	(0)	485	245	1575084
4189	14.4	5.9	0.9	chr17	16493674	16494346	(66763095)	+	LTR62	LTR/ERVL	1	709	(0)	1575085
874	19.1	4.9	11.6	chr17	17417825	17417876	(65839565)	+	MLT1H	LTR/ERVL-MaLR	20	65	(484)	1576639
3383	14.5	8.8	4.6	chr17	17417877	17418549	(65838892)	+	LTR62	LTR/ERVL	3	706	(3)	1576640
10597	5.0	1.4	0.5	chr17	39333171	39334488	(43922953)	+	SVA_B	Retroposon/SVA	54	1383	(0)	1609821
3711	7.9	0.4	0.0	chr17	40372447	40372915	(42884526)	C	LTR7C	LTR/ERV1	(0)	471	1	1611906
857	19.9	8.6	0.0	chr17	41678325	41678495	(41578946)	+	LTR27D	LTR/ERV1	287	473	(142)	1614027
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
2928	11.8	2.4	0.2	chr17	42535068	42535524	(40721917)	C	MER41B	LTR/ERV1	(167)	467	1	1615833
434	30.2	8.0	4.7	chr17	42535586	42536003	(40721438)	+	L2c	LINE/L2	2938	3387	(0)	1615843
5189	16.6	2.7	5.7	chr17	44159417	44160286	(39097155)	C	LTR13A	LTR/ERVK	(0)	966	138	1619361
438	29.7	5.0	11.4	chr17	44266940	44267175	(38990266)	C	MIR	SINE/MIR	(44)	224	5	1619567
1420	15.9	15.3	0.4	chr17	44288102	44288352	(38969089)	C	AluJb	SINE/Alu	(16)	296	2	1619616
899	26.1	4.5	3.2	chr17	44317401	44317685	(38939756)	+	L4_A_Mam	LINE/RTE-X	4687	4975	(15)	1619682
679	21.2	4.9	1.3	chr17	44317695	44317852	(38939589)	+	L2c	LINE/L2	3223	3386	(1)	1619683
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
2141	12.3	1.0	1.0	chr17	47218507	47218816	(36038625)	+	AluSz6	SINE/Alu	3	312	(0)	1625587
273	31.2	12.0	1.1	chr17	47218964	47219141	(36038300)	C	MIR	SINE/MIR	(5)	257	58	1625588
847	9.5	0.0	5.1	chr17	49569546	49569682	(33687759)	C	FLAM_C	SINE/Alu	(12)	131	2	1630178
2316	7.5	0.0	0.0	chr17	49569710	49570014	(33687427)	C	AluSx	SINE/Alu	(7)	305	1	1630179
2163	11.2	2.0	0.3	chr17	57997934	57998229	(25259212)	+	AluSx1	SINE/Alu	2	302	(10)	1644244
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
5602	9.5	3.5	2.8	chr17	59290107	59290917	(23966524)	C	LTR5_Hs	LTR/ERVK	(151)	817	1	1646915
2277	9.4	0.3	1.6	chr17	59290952	59291258	(23966183)	C	AluSq2	SINE/Alu	(10)	303	1	1646916
26	16.9	0.0	0.0	chr17	59787516	59787539	(23469902)	+	(TTAA)n	Simple_repeat	1	24	(0)	1647941
2247	10.2	0.7	0.0	chr17	59787540	59787824	(23469617)	+	AluSx1	SINE/Alu	1	287	(25)	1647942
22	4.0	0.0	0.0	chr17	59838096	59838121	(23419320)	+	(T)n	Simple_repeat	1	26	(0)	1648064
4052	10.4	1.9	2.1	chr17	62143664	62143828	(21113613)	+	MER61E	LTR/ERV1	1	161	(408)	1652362
2278	8.5	0.0	2.9	chr17	62143829	62144135	(21113306)	+	AluSg	SINE/Alu	1	298	(12)	1652363
2527	4.8	1.3	28.7	chr17	62147305	62147946	(21109495)	+	LTR7B	LTR/ERV1	1	464	(0)	1652370
308	21.5	1.5	0.0	chr17	64497593	64497657	(18759784)	+	MER5A	DNA/hAT-Charlie	1	66	(123)	1656726
255	25.2	6.6	10.7	chr17	64922924	64923023	(18334418)	C	L1MEi	LINE/L1	(1525)	687	601	1657602
784	29.8	6.3	3.3	chr17	64923050	64923354	(18334087)	C	L1MEi	LINE/L1	(1883)	329	15	1657602
292	34.0	4.5	3.0	chr17	66620440	66620636	(16636805)	C	MLT1J	LTR/ERVL-MaLR	(311)	201	2	1660547
430	8.6	0.0	0.0	chr17	67784650	67784707	(15472734)	C	MER83B	LTR/ERV1	(28)	350	293	1662784
2620	12.8	7.4	0.9	chr17	68122451	68122890	(15134551)	C	LTR7C	LTR/ERV1	(0)	471	1	1663578
1917	12.9	6.7	7.2	chr17	69047321	69047419	(14210022)	C	THE1C	LTR/ERVL-MaLR	(0)	375	280	1665147
3084	12.2	9.2	2.5	chr17	69047420	69047973	(14209468)	+	LTR4	LTR/ERV1	1	595	(1)	1665148
1837	9.5	0.4	0.4	chr17	75123357	75123609	(8133832)	C	AluY	SINE/Alu	(15)	296	44	1675402
253	28.7	4.2	15.4	chr17	75123610	75123640	(8133801)	C	L1ME4a	LINE/L1	(292)	5832	5814	1675400
2309	9.0	0.0	0.0	chr17	75775945	75776234	(7481207)	+	AluSc	SINE/Alu	2	291	(18)	1676749
202	29.8	4.0	4.8	chr17	76557890	76558010	(6699431)	+	MIR	SINE/MIR	96	216	(52)	1678274
2818	13.1	3.6	0.0	chr17	76601713	76602163	(6655278)	C	MER41B	LTR/ERV1	(166)	468	1	1678372
1833	7.3	13.4	0.1	chr17	77087688	77088029	(6169412)	C	MER41A	LTR/ERV1	(165)	469	3	1679418
278	32.6	14.0	0.0	chr17	77088042	77088176	(6169265)	C	L3	LINE/CR1	(2256)	1843	1687	1679419
1527	16.3	6.2	9.5	chr17	77109400	77109649	(6147792)	C	LTR54	LTR/ERV1	(259)	251	1	1679471
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
364	30.0	7.4	7.0	chr17	82461940	82462154	(795287)	+	MIRb	SINE/MIR	2	217	(51)	1687674
713	10.2	16.3	0.0	chr17	82734603	82734720	(522721)	+	AluSc5	SINE/Alu	1	141	(168)	1688165
2300	5.5	1.9	1.6	chr17	82734722	82735030	(522411)	+	AluY	SINE/Alu	1	310	(1)	1688166
1847	20.1	9.7	4.0	chr18	1053600	1054172	(79319113)	C	MLT1E2	LTR/ERVL-MaLR	(15)	612	1	1690905
2336	25.4	13.3	2.9	chr18	1406621	1407047	(78966238)	+	L1ME3	LINE/L1	3193	3669	(2650)	1691332
2584	3.8	1.0	0.0	chr18	1407048	1407340	(78965945)	+	AluY	SINE/Alu	1	296	(15)	1691335
2369	7.6	1.0	1.3	chr18	2679198	2679499	(77693786)	+	AluYj4	SINE/Alu	1	301	(10)	1693086
6344	19.4	7.2	4.7	chr18	2679500	2680834	(77692451)	C	L1MB7	LINE/L1	(5616)	1901	468	1693081
565	30.4	5.8	1.0	chr18	3210767	3210962	(77162323)	+	MIRb	SINE/MIR	7	212	(56)	1693961
930	13.9	0.0	0.0	chr18	3453100	3453236	(76920049)	C	FLAM_C	SINE/Alu	(5)	138	2	1694442
2949	26.8	10.7	6.7	chr18	3460654	3462492	(76910793)	C	L1M4a1	LINE/L1	(247)	2505	249	1694444
24	32.4	0.0	1.4	chr18	5245927	5245998	(75127287)	+	(AT)n	Simple_repeat	1	72	(0)	1696994
554	22.6	13.0	13.0	chr18	5246011	5246279	(75127006)	C	MLT1H	LTR/ERVL-MaLR	(31)	518	250	1696995
56	0.0	0.0	0.0	chr18	6676183	6676230	(73697055)	+	(CA)n	Simple_repeat	1	48	(0)	1698892
3723	11.7	1.2	1.4	chr18	9008705	9009267	(71364018)	C	LTR73	LTR/ERV1	(0)	572	11	1702257
250	12.8	0.0	0.0	chr18	9009275	9009313	(71363972)	+	MER2B	DNA/TcMar-Tigger	298	336	(0)	1702258
2155	11.2	0.3	1.0	chr18	9009364	9009659	(71363626)	+	AluSp	SINE/Alu	1	294	(19)	1702259
337	27.5	17.1	2.5	chr18	9849472	9850083	(70523202)	C	L2a	LINE/L2	(0)	3375	2665	1703746
7327	18.6	3.1	5.0	chr18	9876145	9876951	(70496334)	+	L1MC3	LINE/L1	7004	7785	(0)	1703784
573	30.5	9.2	2.8	chr18	12302625	12302948	(68070337)	+	MER115	DNA/hAT-Tip100	347	693	(0)	1707176
1792	21.9	18.7	7.7	chr18	31821645	31822323	(48550962)	+	LTR19C	LTR/ERV1	7	777	(2)	1728255
2241	10.1	16.4	3.6	chr18	31826669	31827058	(48546227)	C	LTR7	LTR/ERV1	(0)	450	1	1728266
2357	20.1	9.4	1.9	chr18	31827059	31827366	(48545919)	+	LTR48B	LTR/ERV1	322	644	(0)	1728265
294	28.0	2.0	5.7	chr18	32093844	32093949	(48279336)	+	MER5A	DNA/hAT-Charlie	37	138	(51)	1728829
1095	3.6	0.0	2.9	chr18	32093954	32094090	(48279195)	C	AluY	SINE/Alu	(178)	133	1	1728830
15	5.6	0.0	0.0	chr18	32094200	32094218	(48279067)	+	(T)n	Simple_repeat	1	19	(0)	1728831
2078	9.9	18.9	1.9	chr18	58646337	58646708	(21726577)	C	LTR7	LTR/ERV1	(0)	450	1	1767590
749	8.0	19.4	2.6	chr18	74293089	74293242	(6080043)	+	LTR7	LTR/ERV1	1	186	(264)	1789688
399	32.5	8.9	1.1	chr19	380157	380424	(58237192)	+	L1M5	LINE/L1	4956	5246	(900)	1796837
2197	11.2	0.7	0.0	chr19	380483	380778	(58236838)	+	AluY	SINE/Alu	1	298	(13)	1796838
2527	7.4	0.0	0.3	chr19	516373	516682	(58100934)	C	AluSc	SINE/Alu	(0)	309	1	1797069
3733	5.0	2.2	5.0	chr19	516683	516981	(58100635)	C	HERV1_LTRc	LTR/ERV1	(204)	287	1	1797068
244	35.8	3.4	0.9	chr19	925385	925516	(57692100)	C	MIRc	SINE/MIR	(106)	162	25	1797903
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
1201	21.9	14.0	0.9	chr19	2949859	2950319	(55667297)	+	LTR65	LTR/ERV1	1	524	(145)	1801984
226	27.4	6.7	6.7	chr19	3763129	3763218	(54854398)	+	MIR3	SINE/MIR	21	110	(98)	1803981
2130	9.0	6.2	0.0	chr19	4146060	4146347	(54471269)	C	AluSx	SINE/Alu	(5)	307	1	1804865
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
27	35.1	0.7	3.5	chr19	5799137	5799278	(52818338)	+	(TC)n	Simple_repeat	1	143	(0)	1808879
296	8.1	0.0	0.0	chr19	5857794	5857830	(52759786)	+	AluYi6	SINE/Alu	3	39	(272)	1808996
2676	14.0	6.8	1.4	chr19	5857833	5858275	(52759341)	+	LTR7C	LTR/ERV1	1	469	(2)	1808997
978	11.3	0.0	0.0	chr19	6580096	6580228	(52037388)	+	AluSx	SINE/Alu	1	133	(179)	1810624
2090	13.9	0.7	0.0	chr19	6589380	6589689	(52027927)	C	AluSx1	SINE/Alu	(0)	312	1	1810659
174	31.0	3.4	0.7	chr19	6589690	6590075	(52027541)	+	(CT)n	Simple_repeat	2	396	(0)	1810660
30	0.0	0.0	0.0	chr19	6862717	6862742	(51754874)	+	(AC)n	Simple_repeat	1	26	(0)	1811397
2238	9.9	2.9	0.3	chr19	8032929	8033231	(50584385)	C	AluSq2	SINE/Alu	(2)	311	1	1814223
3817	11.9	1.4	6.8	chr19	8033232	8033694	(50583922)	C	LTR19B	LTR/ERV1	(140)	440	1	1814222
2218	10.7	18.9	0.3	chr19	8203645	8204010	(50413606)	C	LTR7	LTR/ERV1	(0)	450	1	1814691
390	23.4	2.7	6.1	chr19	8204011	8204062	(50413554)	+	MER81	DNA/hAT-Blackjack	63	110	(4)	1814690
1707	17.9	0.0	3.5	chr19	8418488	8418829	(50198787)	C	AluJr	SINE/Alu	(0)	312	1	1815265
1626	12.5	0.0	0.0	chr19	9539119	9539342	(49078274)	C	AluSz6	SINE/Alu	(16)	296	73	1817614
2639	13.1	8.9	0.0	chr19	9539343	9539771	(49077845)	+	LTR7C	LTR/ERV1	1	471	(0)	1817615
2831	12.1	7.0	0.0	chr19	9550133	9550570	(49067046)	+	LTR7C	LTR/ERV1	1	471	(0)	1817620
422	19.7	0.0	0.0	chr19	9621595	9621665	(48995951)	+	FLAM_C	SINE/Alu	1	71	(62)	1817789
3155	15.1	1.8	2.5	chr19	9621666	9622251	(48995365)	C	LTR10C	LTR/ERV1	(62)	529	1	1817790
1799	20.4	6.9	0.9	chr19	10028654	10029074	(48588542)	C	LTR7C	LTR/ERV1	(0)	471	24	1818732
4141	24.4	2.6	2.1	chr19	10029158	10030207	(48587409)	C	HERVH-int	LTR/ERV1	(18)	7695	6640	1818732
397	28.7	6.0	4.1	chr19	10259150	10259345	(48358271)	+	L2	LINE/L2	2766	2965	(454)	1819303
2188	12.9	0.0	0.0	chr19	10288166	10288474	(48329142)	+	AluJb	SINE/Alu	1	309	(3)	1819378
18	7.9	0.0	0.0	chr19	10288577	10288603	(48329013)	+	(TTG)n	Simple_repeat	1	27	(0)	1819379
17	27.5	5.7	3.9	chr19	10421965	10422086	(48195530)	+	(TGTGAC)n	Simple_repeat	1	129	(0)	1819696
1263	20.5	13.0	10.3	chr19	11747275	11747813	(46869803)	+	L1MEc	LINE/L1	1317	1946	(4454)	1823062
1638	16.6	8.3	8.1	chr19	12571531	12571733	(46045883)	+	LTR39	LTR/ERV1	222	422	(361)	1824724
2166	8.9	19.8	0.6	chr19	12571734	12572096	(46045520)	+	LTR7	LTR/ERV1	1	450	(0)	1824726
2260	9.9	0.0	0.7	chr19	12787775	12788098	(45829518)	+	AluSg	SINE/Alu	1	310	(0)	1825212
853	28.3	4.3	0.0	chr19	12788161	12788404	(45829212)	+	MIR	SINE/MIR	6	260	(2)	1825213
232	3.5	0.0	0.0	chr19	13155390	13155418	(45462198)	+	MIRc	SINE/MIR	120	148	(120)	1825988
1858	11.2	0.0	0.4	chr19	14275708	14275956	(44341660)	C	AluSx1	SINE/Alu	(1)	311	64	1829037
2510	15.4	6.3	0.2	chr19	14275958	14276392	(44341224)	+	LTR7C	LTR/ERV1	9	471	(0)	1829038
1982	11.3	0.0	4.5	chr19	14343621	14343705	(44273911)	+	AluSz	SINE/Alu	1	83	(229)	1829249
2857	7.5	1.9	14.0	chr19	14343706	14344066	(44273550)	+	LTR7B	LTR/ERV1	1	293	(171)	1829250
3565	5.0	1.7	3.5	chr19	15835691	15836170	(42781446)	+	LTR7C	LTR/ERV1	1	471	(0)	1832599
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
1974	9.9	0.0	0.4	chr19	17746951	17747203	(40870413)	C	AluSx1	SINE/Alu	(2)	310	59	1837174
424	30.5	1.3	2.1	chr19	17747264	17747416	(40870200)	+	MIRb	SINE/MIR	35	196	(72)	1837175
1551	16.9	2.3	1.9	chr19	18387260	18387520	(40230096)	+	AluJr	SINE/Alu	14	275	(37)	1838789
12	14.8	3.0	2.9	chr19	18387522	18387554	(40230062)	+	(TAAG)n	Simple_repeat	1	34	(0)	1838790
261	15.7	5.5	0.0	chr19	18387621	18387671	(40229945)	C	L2b	LINE/L2	(0)	3375	3322	1838791
1600	14.3	0.0	0.0	chr19	18389417	18389639	(40227977)	C	AluJb	SINE/Alu	(6)	306	84	1838795
588	31.3	6.9	7.6	chr19	18390227	18390593	(40227023)	C	L2b	LINE/L2	(19)	3356	2993	1838796
876	11.6	0.7	0.0	chr19	21129348	21129485	(37488131)	C	LTR7C	LTR/ERV1	(0)	471	333	1843569
1354	6.6	1.6	0.0	chr19	21129483	21129664	(37487952)	C	LTR7C	LTR/ERV1	(286)	185	1	1843569
3451	9.2	0.2	1.3	chr19	21134781	21135256	(37482360)	C	LTR7C	LTR/ERV1	(0)	471	1	1843570
1527	22.0	7.8	6.4	chr19	28614818	28615273	(30002343)	+	LTR2	LTR/ERV1	1	463	(0)	1849048
1770	18.7	0.0	1.9	chr19	28615532	28615847	(30001769)	+	AluJb	SINE/Alu	1	310	(2)	1849050
361	18.5	24.7	1.4	chr19	28615946	28616093	(30001523)	+	ORSL	DNA/hAT-Tip100	2	195	(80)	1849051
1101	26.7	2.1	0.4	chr19	34919838	34920111	(23697505)	C	LTR16A	LTR/ERVL	(0)	451	173	1859333
6287	12.8	1.2	1.2	chr19	34920178	34921118	(23696498)	+	LTR5_Hs	LTR/ERVK	1	941	(27)	1859334
2485	6.8	18.7	0.3	chr19	35067753	35068119	(23549497)	C	LTR7	LTR/ERV1	(0)	450	1	1859643
1285	9.6	1.2	0.0	chr19	35068120	35068286	(23549330)	C	AluSx1	SINE/Alu	(143)	169	1	1859644
4497	9.9	3.9	0.2	chr19	35165102	35165711	(23451905)	C	MER41B	LTR/ERV1	(0)	634	1	1859854
1109	17.3	4.7	2.6	chr19	35165712	35165781	(23451835)	C	Tigger4a	DNA/TcMar-Tigger	(171)	65	1	1859853
897	18.6	4.7	0.0	chr19	35165817	35166045	(23451571)	C	L2a	LINE/L2	(310)	3116	2868	1859852
17	22.9	1.5	5.8	chr19	35267593	35267660	(23349956)	+	GA-rich	Low_complexity	1	69	(0)	1860057
467	28.8	12.5	5.7	chr19	36104089	36104438	(22513178)	C	L2a	LINE/L2	(0)	3426	3050	1861883
876	24.5	1.9	4.0	chr19	38882763	38883069	(19734547)	+	LTR82A	LTR/ERVL	10	297	(533)	1867661
2443	8.5	0.0	2.5	chr19	38883070	38883388	(19734228)	C	AluSq2	SINE/Alu	(2)	311	1	1867662
538	28.9	10.0	1.4	chr19	40440262	40440472	(18177144)	+	MIR	SINE/MIR	11	241	(21)	1871070
1187	18.7	12.4	0.0	chr19	40440485	40440709	(18176907)	C	AluJb	SINE/Alu	(55)	257	1	1871071
1464	16.2	7.8	1.8	chr19	40446769	40447046	(18170570)	C	AluJr	SINE/Alu	(15)	297	2	1871085
7224	10.4	1.8	0.2	chr19	40822624	40823609	(17794007)	+	LTR5B	LTR/ERVK	1	1002	(0)	1872027
632	23.6	2.7	3.2	chr19	42557152	42557339	(16060277)	C	MIRb	SINE/MIR	(0)	268	82	1875506
2810	11.7	7.7	0.0	chr19	42557356	42557790	(16059826)	+	LTR7C	LTR/ERV1	1	471	(0)	1875507
355	25.6	8.8	0.6	chr19	44165401	44165557	(14452059)	+	MIR	SINE/MIR	61	231	(31)	1878310
2020	10.9	18.3	1.9	chr19	44591494	44591866	(14025750)	C	LTR7	LTR/ERV1	(0)	450	3	1879065
1578	6.7	0.9	3.7	chr19	44591867	44591910	(14025706)	+	L1PA8	LINE/L1	6134	6170	(2)	1879064
685	28.1	0.8	7.8	chr19	45585170	45585427	(13032189)	+	MIR	SINE/MIR	10	249	(13)	1881709
2873	6.3	0.4	22.6	chr19	46109616	46109974	(12507642)	C	LTR7B	LTR/ERV1	(229)	235	1	1882957
961	22.2	9.0	2.7	chr19	46109975	46110374	(12507242)	+	LTR76	LTR/ERV1	244	596	(0)	1882956
869	13.5	1.9	3.1	chr19	46191607	46191767	(12425849)	C	LTR64	LTR/ERV1	(369)	159	1	1883091
2301	12.1	0.0	0.6	chr19	46192908	46193220	(12424396)	+	AluSz	SINE/Alu	1	311	(1)	1883095
2633	19.0	1.9	5.8	chr19	46193221	46193729	(12423887)	+	Tigger7	DNA/TcMar-Tigger	94	580	(1911)	1883094
2053	12.7	0.0	0.4	chr19	46194540	46194814	(12422802)	+	AluSx1	SINE/Alu	1	274	(38)	1883096
2447	13.0	13.4	0.7	chr19	46202976	46203386	(12414230)	C	LTR7C	LTR/ERV1	(0)	471	1	1883114
3157	20.0	3.1	1.3	chr19	46205120	46205748	(12411868)	+	LTR9D	LTR/ERV1	1	641	(4)	1883119
299	27.4	11.5	4.0	chr19	46205848	46205999	(12411617)	C	LTR52	LTR/ERVL	(231)	190	26	1883120
1487	9.0	1.0	1.0	chr19	48254471	48254670	(10362946)	+	AluSx3	SINE/Alu	1	200	(111)	1888294
2155	15.2	6.5	3.7	chr19	48254703	48255085	(10362531)	+	MER65A	LTR/ERV1	3	406	(39)	1888295
3891	4.3	0.2	0.2	chr19	48269717	48270187	(10347429)	+	LTR7C	LTR/ERV1	1	471	(0)	1888326
7899	7.5	1.4	0.3	chr19	48876222	48877217	(9740399)	C	LTR13	LTR/ERVK	(0)	1007	1	1889840
775	14.5	0.0	3.1	chr19	48967917	48968044	(9649572)	+	FLAM_C	SINE/Alu	5	128	(5)	1890083
1723	13.5	0.3	6.4	chr19	49486861	49487171	(9130445)	+	AluJo	SINE/Alu	1	292	(20)	1891207
13	12.3	5.1	4.9	chr19	50620647	50620685	(7996931)	+	GA-rich	Low_complexity	1	41	(0)	1893943
2465	7.3	0.0	0.0	chr19	52912113	52912412	(5705204)	C	AluY	SINE/Alu	(11)	300	1	1898447
1990	14.7	0.0	1.6	chr19	52912444	52912755	(5704861)	+	AluSc8	SINE/Alu	1	307	(4)	1898448
5433	16.1	3.4	1.4	chr19	52936055	52937035	(5680581)	+	LTR5B	LTR/ERVK	2	1002	(0)	1898502
1545	14.0	0.0	0.5	chr19	53358686	53358907	(5258709)	C	AluSg4	SINE/Alu	(19)	291	71	1899196
1018	6.3	4.2	5.5	chr19	53358908	53359094	(5258522)	+	LTR7B	LTR/ERV1	1	240	(210)	1899197
28625	7.3	0.6	0.2	chr19	53359095	53360013	(5257603)	+	HERVK-int	LTR/ERVK	3824	4740	(2796)	1899198
5313	11.1	8.3	0.3	chr2	6846889	6847664	(235345865)	C	LTR25	LTR/ERV1	(0)	844	1	1919104
1260	21.4	8.8	1.6	chr2	9200972	9201285	(232992244)	C	MER58B	DNA/hAT-Charlie	(2)	339	1	1922552
2764	10.5	8.9	0.2	chr2	9476484	9476913	(232716616)	C	LTR7C	LTR/ERV1	(0)	471	1	1923016
864	16.6	1.3	1.9	chr2	9476914	9477045	(232716484)	C	AluJb	SINE/Alu	(43)	269	137	1923015
272	33.1	7.3	0.0	chr2	21228424	21228562	(220964967)	C	MIRc	SINE/MIR	(19)	249	100	1941477
311	22.6	4.2	5.0	chr2	24009580	24009700	(218183829)	C	MLT1J	LTR/ERVL-MaLR	(287)	225	106	1945327
18	25.2	0.0	0.0	chr2	24458076	24458123	(217735406)	+	(ATG)n	Simple_repeat	1	48	(0)	1946188
2127	14.9	13.2	0.7	chr2	24784987	24785398	(217408131)	+	LTR7C	LTR/ERV1	1	471	(0)	1946733
244	34.5	7.6	3.5	chr2	32168731	32168931	(210024598)	C	L2	LINE/L2	(404)	3015	2806	1959683
252	37.9	7.6	5.8	chr2	32480089	32480488	(209713041)	+	L2c	LINE/L2	2974	3381	(6)	1960384
2201	10.4	0.3	0.0	chr2	38827867	38828155	(203365374)	C	AluSp	SINE/Alu	(23)	290	1	1970061
277	30.0	6.4	9.1	chr2	39149984	39150120	(203043409)	+	MLT1H2	LTR/ERVL-MaLR	199	330	(219)	1970659
766	19.9	7.0	2.9	chr2	39150209	39150439	(203043090)	+	MLT1H2	LTR/ERVL-MaLR	284	555	(0)	1970659
4212	8.2	0.6	1.6	chr2	39468180	39468739	(202724790)	+	MER41A	LTR/ERV1	1	554	(0)	1971259
16	0.0	0.0	7.1	chr2	42353768	42353795	(199839734)	+	(AAAC)n	Simple_repeat	1	28	(0)	1975378
1555	19.9	1.6	1.9	chr2	42353913	42354276	(199839253)	+	L1MB8	LINE/L1	5816	6178	(0)	1975379
865	10.8	0.8	1.6	chr2	42359897	42360025	(199833504)	C	FLAM_C	SINE/Alu	(15)	128	1	1975392
190	30.1	16.3	1.9	chr2	47297728	47297832	(194895697)	+	MIRb	SINE/MIR	41	163	(105)	1983749
407	21.8	12.1	7.9	chr2	47297833	47297958	(194895571)	+	MamTip1	DNA/hAT-Tip100	1	128	(139)	1983750
3763	13.0	8.8	0.9	chr2	47297959	47298541	(194894988)	+	MER41B	LTR/ERV1	1	634	(0)	1983751
3111	8.0	0.4	10.8	chr2	47582656	47583173	(194610356)	C	LTR7B	LTR/ERV1	(0)	464	1	1984363
37663	16.4	2.0	3.6	chr2	47583174	47591063	(194602466)	C	HERVH-int	LTR/ERV1	(0)	7713	1	1984363
2149	20.0	8.2	17.7	chr2	47687884	47688008	(194505521)	C	LTR41	LTR/ERVL	(77)	691	604	1984556
1979	8.9	24.8	0.3	chr2	47688009	47688346	(194505183)	+	LTR7	LTR/ERV1	3	450	(0)	1984558
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
615	22.4	13.9	0.0	chr2	61002079	61002239	(181191290)	+	MER5A	DNA/hAT-Charlie	2	188	(1)	2003471
346	31.8	16.1	3.5	chr2	61002240	61002445	(181191084)	C	L3	LINE/CR1	(2318)	1781	1558	2003467
558	28.4	4.0	1.8	chr2	64228932	64229086	(177964443)	+	MIR	SINE/MIR	37	198	(64)	2009035
5220	11.7	1.4	1.4	chr2	69798832	69799610	(172393919)	C	LTR19C	LTR/ERV1	(0)	779	1	2017771
17	20.5	0.0	4.7	chr2	83951433	83951475	(158242054)	+	(CT)n	Simple_repeat	1	43	(0)	2038329
199	25.0	4.5	9.7	chr2	83951574	83951666	(158241863)	+	L2c	LINE/L2	3299	3386	(1)	2038330
2760	15.8	0.9	0.0	chr2	85497535	85497982	(156695547)	+	MER57A-int	LTR/ERV1	5344	5795	(392)	2040905
572	20.1	12.6	7.1	chr2	85497983	85498207	(156695322)	+	LTR54	LTR/ERV1	1	239	(271)	2040906
1612	10.5	11.8	0.4	chr2	85546187	85546425	(156647104)	+	AluY	SINE/Alu	21	290	(21)	2041002
1873	11.4	5.2	0.0	chr2	85546437	85546707	(156646822)	+	AluSx1	SINE/Alu	3	288	(24)	2041003
3227	6.5	0.9	9.1	chr2	85657641	85658146	(156535383)	C	LTR7B	LTR/ERV1	(0)	464	1	2041237
3600	8.3	5.2	1.8	chr2	85890279	85890657	(156302872)	C	MER41C	LTR/ERV1	(150)	371	2	2041677
1294	18.9	6.4	2.8	chr2	85934224	85934506	(156259023)	+	LTR64	LTR/ERV1	27	320	(208)	2041776
1296	22.3	6.1	8.8	chr2	85934507	85935143	(156258386)	+	LTR49-int	LTR/ERV1	2704	3785	(2854)	2041777
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
2918	14.4	1.1	1.1	chr2	96918679	96919141	(145274388)	+	LTR2	LTR/ERV1	1	463	(0)	2053007
4327	10.9	3.5	1.0	chr2	96921850	96922343	(145271186)	+	MER41B	LTR/ERV1	1	509	(125)	2053011
3925	9.9	3.2	0.6	chr2	97711948	97712496	(144481033)	C	LTR6A	LTR/ERV1	(0)	564	1	2054036
2077	9.7	19.3	0.3	chr2	98045195	98045558	(144147971)	C	LTR7	LTR/ERV1	(0)	450	1	2054467
6202	20.6	8.6	5.9	chr2	98045559	98045708	(144147821)	+	L1MDa	LINE/L1	2385	2522	(4111)	2054464
248	34.6	12.4	1.9	chr2	98734989	98735147	(143458382)	C	L2b	LINE/L2	(82)	3293	3116	2055407
8962	7.8	3.1	0.9	chr2	99773692	99775704	(142417825)	+	L1PA11	LINE/L1	4103	6174	(0)	2056970
320	25.3	9.6	6.8	chr2	100292303	100292463	(141901066)	C	L1MCc	LINE/L1	(6034)	389	224	2057670
3643	6.5	2.3	0.0	chr2	101248690	101249149	(140944380)	C	LTR7C	LTR/ERV1	(0)	471	1	2059262
2111	9.1	19.6	0.3	chr2	101251269	101251631	(140941898)	C	LTR7	LTR/ERV1	(0)	450	1	2059268
1569	8.3	4.0	6.2	chr2	101251632	101251744	(140941785)	+	L1PB2	LINE/L1	6039	6148	(3)	2059267
3913	15.2	3.5	7.3	chr2	111433554	111434291	(130759238)	C	LTR62	LTR/ERVL	(0)	709	1	2073526
20201	9.5	2.1	2.4	chr2	112069222	112070818	(130122711)	C	L1PREC2	LINE/L1	(60)	6720	5135	2074503
2525	15.0	6.9	0.0	chr2	119338578	119338998	(122854531)	C	LTR47A	LTR/ERVL	(0)	452	1	2085158
610	20.0	1.7	0.0	chr2	119339002	119339116	(122854413)	+	L1MC4	LINE/L1	7926	8042	(0)	2085145
457	32.5	9.9	2.9	chr2	126969875	126970118	(115223411)	+	MIRb	SINE/MIR	2	264	(4)	2096672
395	22.1	12.7	0.8	chr2	144595384	144595515	(97598014)	+	MIRc	SINE/MIR	74	223	(45)	2121621
2653	11.2	13.6	0.0	chr2	151380467	151380905	(90812624)	C	LTR54	LTR/ERV1	(0)	510	3	2130784
657	1.4	0.0	0.0	chr2	156401147	156401217	(85792312)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	2137396
292	32.7	6.2	1.3	chr2	157234962	157235113	(84958416)	+	L2c	LINE/L2	3228	3387	(0)	2138463
302	28.3	7.8	0.0	chr2	157260920	157261025	(84932504)	C	MIR3	SINE/MIR	(73)	135	21	2138505
2046	16.4	7.6	1.2	chr2	157343067	157343474	(84850055)	C	LTR7C	LTR/ERV1	(0)	471	36	2138620
7852	17.0	0.6	0.9	chr2	157343501	157345005	(84848524)	+	HERVH-int	LTR/ERV1	6214	7713	(0)	2138621
2466	14.7	6.8	0.7	chr2	157345008	157345447	(84848082)	+	LTR7C	LTR/ERV1	3	471	(0)	2138621
18380	11.6	1.9	5.7	chr2	157929591	157930549	(84262980)	C	Tigger4	DNA/TcMar-Tigger	(1856)	875	1	2139462
2395	21.0	9.3	2.5	chr2	159134926	159135548	(83057981)	C	L1MB8	LINE/L1	(0)	6178	5514	2141173
2982	19.3	5.4	1.8	chr2	159298173	159298189	(82895340)	C	L1MB7	LINE/L1	(9)	6175	6165	2141387
2488	14.3	7.5	0.5	chr2	159298190	159298625	(82894904)	+	LTR7C	LTR/ERV1	3	471	(0)	2141388
362	25.6	17.8	0.0	chr2	168202397	168202521	(73991008)	C	MIRb	SINE/MIR	(73)	195	44	2153207
2121	11.3	2.0	0.0	chr2	169012478	169012768	(73180761)	+	AluSx1	SINE/Alu	16	312	(0)	2154390
936	22.8	7.0	4.2	chr2	169415198	169415504	(72778025)	C	MLT1G3	LTR/ERVL-MaLR	(104)	491	176	2154924
327	27.4	13.8	1.9	chr2	169583866	169583973	(72609556)	+	MIRc	SINE/MIR	22	144	(124)	2155222
184	19.7	24.8	1.3	chr2	169584078	169584154	(72609375)	+	L2c	LINE/L2	3281	3381	(6)	2155223
1782	16.7	25.9	3.6	chr2	169711625	169712096	(72481433)	C	LTR18B	LTR/ERVL	(0)	614	1	2155456
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
1261	27.1	10.0	4.8	chr2	170264251	170264553	(71928976)	C	MLT1H1	LTR/ERVL-MaLR	(211)	344	3	2156369
2108	8.7	0.0	0.0	chr2	170650673	170650942	(71542587)	C	AluSg	SINE/Alu	(0)	310	40	2156974
2255	15.4	8.9	3.2	chr2	175199644	175200086	(66993443)	C	LTR7C	LTR/ERV1	(0)	471	1	2164455
2194	12.7	0.3	1.9	chr2	175200087	175200248	(66993281)	+	AluSz	SINE/Alu	152	311	(1)	2164454
1872	15.5	0.0	2.4	chr2	176020997	176021286	(66172243)	+	AluJb	SINE/Alu	4	286	(26)	2165542
1551	17.4	9.9	0.0	chr2	177222526	177222789	(64970740)	+	AluJb	SINE/Alu	1	293	(19)	2167301
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
3968	7.7	1.8	3.9	chr2	188234862	188235427	(53958102)	+	MER41A	LTR/ERV1	1	554	(0)	2181395
421	30.5	9.1	2.6	chr2	190182073	190182267	(52011262)	C	L3	LINE/CR1	(47)	4052	3844	2183964
285	23.9	2.7	0.0	chr2	190182307	190182377	(52011152)	+	Charlie4z	DNA/hAT-Charlie	89	161	(6)	2183965
4057	10.4	1.7	8.0	chr2	195368772	195369448	(46824081)	C	MER41B	LTR/ERV1	(0)	634	1	2190796
4841	2.5	0.2	0.2	chr2	201126038	201126595	(41066934)	C	LTR6B	LTR/ERV1	(0)	558	1	2199587
2553	15.3	6.8	0.7	chr2	204270464	204270905	(37922624)	C	LTR7C	LTR/ERV1	(0)	471	1	2205373
560	22.7	5.5	5.5	chr2	204270907	204271088	(37922441)	C	MIR	SINE/MIR	(2)	260	79	2205374
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
4360	16.6	1.9	3.0	chr2	216114477	216115267	(26078262)	+	MER50C	LTR/ERV1	1	782	(0)	2222208
2393	12.1	8.4	2.4	chr2	230647055	230647476	(11546053)	C	LTR7	LTR/ERV1	(0)	450	1	2245437
376	6.8	0.0	7.8	chr2	230647477	230647540	(11545989)	C	HERVH-int	LTR/ERV1	(0)	7713	7655	2245437
303	12.5	0.0	0.0	chr2	230647542	230647581	(11545948)	+	AluSz	SINE/Alu	27	66	(246)	2245438
3857	9.6	2.5	0.9	chr2	237939676	237940080	(4253449)	C	MER61E	LTR/ERV1	(4)	565	155	2257098
1726	9.0	0.4	0.0	chr2	237940081	237940339	(4253190)	C	AluSp	SINE/Alu	(0)	313	50	2257099
415	27.4	7.7	2.9	chr20	896638	896810	(63547357)	+	MIRb	SINE/MIR	19	200	(68)	2263985
1747	11.9	21.8	0.3	chr20	896877	897229	(63546938)	+	LTR7	LTR/ERV1	1	450	(0)	2263986
3322	11.3	0.6	5.9	chr20	900654	901225	(63542942)	+	HERVH-int	LTR/ERV1	7173	7713	(0)	2263986
2199	10.2	17.1	0.3	chr20	901226	901599	(63542568)	+	LTR7	LTR/ERV1	1	450	(0)	2263986
1296	24.2	8.7	2.3	chr20	1187009	1187405	(63256762)	+	L2a	LINE/L2	2997	3421	(5)	2264569
919	30.6	7.1	2.3	chr20	1187449	1187892	(63256275)	C	L2c	LINE/L2	(70)	3317	2850	2264570
25	6.6	0.0	0.0	chr20	3910296	3910327	(60533840)	+	(T)n	Simple_repeat	1	32	(0)	2269775
1628	26.9	4.1	1.3	chr20	4673541	4674014	(59770153)	C	MER74B	LTR/ERVL	(75)	547	60	2271132
549	17.8	3.3	0.8	chr20	4674030	4674148	(59770019)	+	MER3	DNA/hAT-Charlie	70	191	(18)	2271133
454	23.3	16.0	1.2	chr20	5113660	5113824	(59330343)	C	L1ME1	LINE/L1	(1)	6178	5985	2272044
1395	20.1	1.1	2.2	chr20	5675718	5675985	(58768182)	C	AluJr4	SINE/Alu	(47)	265	1	2273021
1666	25.2	3.0	0.4	chr20	13654149	13654602	(50789565)	+	LTR16A2	LTR/ERVL	29	494	(1)	2285166
1632	16.1	14.1	2.4	chr20	31571459	31571673	(32872494)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	178	2306290
1886	8.1	0.0	0.4	chr20	31571674	31571907	(32872260)	+	AluY	SINE/Alu	2	234	(77)	2306291
14	11.6	3.6	0.0	chr20	31675922	31675949	(32768218)	+	(CCT)n	Simple_repeat	1	29	(0)	2306601
1002	25.5	0.9	0.9	chr20	31676226	31676447	(32767720)	C	MIR	SINE/MIR	(24)	238	17	2306602
4335	8.0	2.8	1.6	chr20	31917745	31918317	(32525850)	C	LTR19B	LTR/ERV1	(0)	580	1	2307184
312	34.3	9.4	1.9	chr20	33690170	33690346	(30753821)	+	MIRb	SINE/MIR	2	204	(64)	2311349
226	28.9	7.7	6.6	chr20	33690349	33690473	(30753694)	+	MER102a	DNA/hAT-Charlie	1	134	(196)	2311350
16	0.0	4.3	0.0	chr20	34955253	34955275	(29488892)	+	(ATGA)n	Simple_repeat	1	24	(0)	2314220
2161	17.8	9.2	3.3	chr20	36083085	36083264	(28360903)	+	MLT2B1	LTR/ERVL	268	490	(30)	2316807
3733	7.5	0.9	10.3	chr20	36083265	36083722	(28360445)	+	MER41A	LTR/ERV1	1	463	(91)	2316809
245	29.4	12.7	3.1	chr20	37972826	37973032	(26471135)	+	L2b	LINE/L2	2919	3155	(232)	2321179
180	31.5	14.1	0.0	chr20	37973181	37973253	(26470914)	C	MIR	SINE/MIR	(98)	164	80	2321180
496	29.0	10.3	2.9	chr20	38563672	38563948	(25880219)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	311	2322394
1118	21.0	6.9	7.7	chr20	46635394	46635625	(17808542)	+	L2a	LINE/L2	3038	3254	(172)	2338088
4109	13.4	2.5	2.1	chr20	46635626	46636256	(17807911)	+	MER41B	LTR/ERV1	1	634	(0)	2338089
2331	10.4	0.0	1.9	chr20	47199725	47199925	(17244242)	C	AluSx1	SINE/Alu	(0)	312	112	2339468
4383	5.2	0.9	1.2	chr20	47199926	47200485	(17243682)	+	LTR6B	LTR/ERV1	1	558	(0)	2339469
295	27.7	1.1	7.8	chr20	47365240	47365341	(17078826)	C	L2a	LINE/L2	(350)	3076	2982	2339828
1860	18.5	0.0	0.3	chr20	47365363	47365660	(17078507)	+	AluJo	SINE/Alu	1	297	(15)	2339829
2500	21.9	4.0	6.8	chr20	49286345	49287070	(15157097)	C	HERVIP10B3-int	LTR/ERV1	(6898)	705	1	2344011
1922	19.0	19.2	0.5	chr20	49287071	49287514	(15156653)	C	LTR10B1	LTR/ERV1	(0)	547	1	2344011
4331	10.9	0.6	6.2	chr20	51338509	51339180	(13104987)	C	MER41B	LTR/ERV1	(0)	634	1	2348941
646	26.2	15.5	0.0	chr20	51339197	51339398	(13104769)	C	MIR	SINE/MIR	(11)	251	13	2348942
316	32.2	4.4	4.4	chr20	53181067	53181375	(11262792)	+	L2a	LINE/L2	3070	3411	(15)	2352950
4360	11.5	1.3	2.2	chr20	59012309	59012469	(5431698)	C	MER41B	LTR/ERV1	(478)	156	1	2363806
333	30.2	5.3	1.2	chr20	64221076	64221239	(222928)	C	MIRb	SINE/MIR	(45)	223	53	2370601
392	21.7	0.0	0.0	chr21	8993968	8994036	(37715947)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2374114
305	35.1	14.0	4.0	chr21	8994800	8995099	(37714884)	+	L1M5	LINE/L1	4807	5141	(1005)	2374115
462	22.0	2.0	0.0	chr21	8996315	8996414	(37713569)	C	MER21A	LTR/ERVL	(336)	595	494	2374119
10320	13.3	3.4	0.4	chr21	14744794	14746373	(31963610)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	2378256
637	33.6	4.5	2.1	chr21	14753143	14753541	(31956442)	+	L1M3c	LINE/L1	539	863	(5800)	2378266
1357	26.4	9.7	8.1	chr21	24272433	24273157	(22436826)	+	LTR19C	LTR/ERV1	1	779	(0)	2390888
211	27.4	1.6	0.0	chr21	29074154	29074215	(17635768)	C	MIRb	SINE/MIR	(19)	249	187	2397697
491	29.2	2.2	1.4	chr21	29074299	29074461	(17635522)	C	MIR	SINE/MIR	(39)	169	3	2397697
11	11.0	12.8	0.0	chr21	31659245	31659283	(15050700)	+	A-rich	Low_complexity	1	44	(0)	2401849
483	26.5	4.5	6.4	chr21	32545982	32546154	(14163829)	C	L2c	LINE/L2	(9)	3378	3185	2403414
530	16.5	16.6	0.0	chr21	33215893	33216013	(13493970)	+	Tigger4a	DNA/TcMar-Tigger	2	146	(90)	2404522
11964	18.5	5.6	1.1	chr21	33330569	33333614	(13376369)	+	L1M2a	LINE/L1	399	3616	(3950)	2404738
436	29.1	21.3	1.8	chr21	33977589	33977703	(12732280)	C	L2a	LINE/L2	(18)	3408	3251	2405923
1578	17.7	1.4	3.3	chr21	33977704	33978002	(12731981)	+	AluJo	SINE/Alu	2	294	(18)	2405924
2648	20.5	4.4	5.6	chr21	34110615	34111259	(12598724)	C	Tigger17a	DNA/TcMar-Tigger	(12)	642	6	2406140
39	7.9	0.0	0.0	chr21	35106755	35106808	(11603175)	+	(CCAGC)n	Simple_repeat	1	54	(0)	2407621
2073	14.5	0.3	0.0	chr21	36097345	36097641	(10612342)	C	AluSz6	SINE/Alu	(14)	298	1	2409136
2779	14.4	19.6	4.4	chr21	36097642	36097784	(10612199)	+	MER4CL34	LTR/ERV1	628	762	(3)	2409135
2059	14.4	8.8	12.3	chr21	36327452	36327874	(10382109)	C	LTR54	LTR/ERV1	(50)	460	22	2409624
2218	12.3	0.0	0.0	chr21	36327875	36328175	(10381808)	C	AluSz	SINE/Alu	(10)	302	2	2409628
203	33.5	2.8	3.4	chr21	36939387	36939565	(9770418)	+	MER5A	DNA/hAT-Charlie	7	184	(5)	2410693
434	28.1	5.0	3.4	chr21	39174162	39174338	(7535645)	C	MIRb	SINE/MIR	(86)	182	3	2414113
1440	13.9	3.8	0.9	chr21	39388093	39388322	(7321661)	+	AluSz	SINE/Alu	1	237	(75)	2414500
492	25.5	12.7	0.5	chr21	39388339	39388539	(7321444)	C	L1MC4	LINE/L1	(283)	7759	7531	2414501
3942	11.8	1.4	5.2	chr21	42935862	42936444	(3773539)	+	Harlequin-int	LTR/ERV1	6263	6828	(68)	2419593
4769	3.4	0.4	0.0	chr21	42936445	42937000	(3772983)	+	LTR6B	LTR/ERV1	1	558	(0)	2419595
3871	10.8	4.0	10.2	chr21	42971099	42971776	(3738207)	+	MER41B	LTR/ERV1	1	634	(0)	2419659
1776	14.5	0.3	1.7	chr21	44939420	44939708	(1770275)	+	AluJr	SINE/Alu	1	285	(27)	2422348
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	3.1	6.1	0.0	chr21	45073746	45073778	(1636205)	+	(AAAC)n	Simple_repeat	1	35	(0)	2422492
387	18.9	1.9	7.8	chr21	45360498	45360543	(1349440)	+	MLT1D	LTR/ERVL-MaLR	573	616	(64)	2422787
6396	17.6	8.4	3.5	chr22	16793777	16795684	(34022784)	+	L1PA16	LINE/L1	1550	3603	(2880)	2427832
3001	22.0	5.7	2.4	chr22	18976957	18977909	(31840559)	+	L1ME1	LINE/L1	5175	6165	(14)	2431250
356	22.1	14.5	6.2	chr22	19022695	19022839	(31795629)	+	L1ME3F	LINE/L1	5904	6062	(181)	2431325
3632	23.5	6.7	4.4	chr22	19044617	19045255	(31773213)	C	L1MD	LINE/L1	(652)	5527	4859	2431347
2271	7.9	1.7	0.0	chr22	19056043	19056333	(31762135)	+	AluSc8	SINE/Alu	5	300	(11)	2431364
2700	12.9	4.6	1.6	chr22	19075461	19075964	(31742504)	C	L1MB3	LINE/L1	(58)	6726	6207	2431389
4982	20.4	4.6	2.4	chr22	19077024	19077820	(31740648)	C	L1MB3	LINE/L1	(815)	5926	5092	2431389
1955	13.5	12.3	2.0	chr22	19096198	19096604	(31721864)	+	L1MA4	LINE/L1	5844	6298	(2)	2431425
3580	17.7	4.3	3.2	chr22	19109050	19109781	(31708687)	+	L1MB2	LINE/L1	5402	6145	(26)	2431458
22	15.1	0.0	0.0	chr22	19111833	19111869	(31706599)	+	(T)n	Simple_repeat	1	37	(0)	2431463
2222	11.4	0.0	1.9	chr22	19141706	19142022	(31676446)	+	AluSx1	SINE/Alu	1	311	(1)	2431497
580	37.7	7.3	0.5	chr22	19142023	19142225	(31676243)	C	L2a	LINE/L2	(180)	3246	3032	2431496
1498	11.4	4.9	1.3	chr22	19145078	19145314	(31673154)	C	AluSg	SINE/Alu	(20)	290	45	2431501
290	31.7	11.6	0.7	chr22	19191492	19191637	(31626831)	+	L2a	LINE/L2	3110	3273	(153)	2431593
3650	17.5	3.6	2.3	chr22	19228866	19229608	(31588860)	+	L1MB3	LINE/L1	5431	6183	(0)	2431633
2406	9.6	0.0	0.0	chr22	19255628	19255928	(31562540)	+	AluSx	SINE/Alu	1	301	(11)	2431677
2122	24.5	8.3	4.3	chr22	19255929	19256145	(31562323)	+	L1M5	LINE/L1	4384	4609	(1537)	2431675
1860	16.5	0.3	4.0	chr22	19256146	19256324	(31562144)	C	AluJr	SINE/Alu	(2)	310	137	2431678
1980	13.8	0.0	0.3	chr22	19256325	19256657	(31561811)	C	AluSz	SINE/Alu	(0)	312	1	2431679
927	19.7	0.0	0.0	chr22	19272791	19272942	(31545526)	C	AluJr	SINE/Alu	(24)	288	137	2431705
487	29.5	7.8	0.6	chr22	19290197	19290432	(31528036)	+	MIRb	SINE/MIR	8	267	(1)	2431739
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
501	22.5	6.3	8.8	chr22	19292177	19292501	(31525967)	+	Tigger3	DNA/TcMar-Tigger	5	322	(26)	2431744
3255	13.3	10.2	1.6	chr22	19298641	19299219	(31519249)	+	LTR24C	LTR/ERV1	1	635	(0)	2431757
2030	13.3	0.0	1.7	chr22	19307170	19307463	(31511005)	+	AluSx	SINE/Alu	1	289	(23)	2431773
1642	21.4	0.0	0.3	chr22	19307565	19307854	(31510614)	C	AluJb	SINE/Alu	(23)	289	1	2431774
1568	17.6	12.2	4.7	chr22	19307950	19308372	(31510096)	C	L1M4c	LINE/L1	(1830)	4546	4088	2431775
5344	17.3	5.3	13.4	chr22	19313364	19313812	(31504656)	+	L1MD1	LINE/L1	3674	4099	(2047)	2431785
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
2286	12.2	0.0	0.0	chr22	19317024	19317327	(31501141)	+	AluSz	SINE/Alu	5	308	(4)	2431795
3534	19.3	4.4	5.2	chr22	19325948	19326556	(31491912)	+	L1MB8	LINE/L1	5480	6072	(106)	2431809
6690	9.3	7.0	2.8	chr22	19337164	19337798	(31480670)	+	L1PBa	LINE/L1	1771	2418	(4445)	2431840
5521	17.4	9.4	1.5	chr22	19344037	19345261	(31473207)	+	L1M3	LINE/L1	2932	4263	(1877)	2431850
2114	12.2	0.0	2.6	chr22	19363616	19363918	(31454550)	+	AluSz	SINE/Alu	1	295	(17)	2431880
1866	15.5	11.4	2.1	chr22	19363919	19364167	(31454301)	+	L1MC1	LINE/L1	6049	6333	(0)	2431879
715	18.5	5.5	3.9	chr22	19364169	19364348	(31454120)	+	L1MCa	LINE/L1	2446	2628	(3693)	2431875
2246	11.3	0.0	0.0	chr22	19367369	19367660	(31450808)	C	AluSx	SINE/Alu	(14)	298	7	2431888
1829	17.1	0.9	8.0	chr22	19367661	19367886	(31450582)	C	MER2B	DNA/TcMar-Tigger	(117)	219	1	2431887
2364	9.7	0.3	0.0	chr22	19372572	19372871	(31445597)	C	AluSq	SINE/Alu	(12)	301	1	2431894
609	20.5	8.1	1.6	chr22	19372879	19373005	(31445463)	C	AluJo	SINE/Alu	(176)	136	1	2431895
1155	12.8	0.0	0.5	chr22	19373006	19373202	(31445266)	C	L1MB7	LINE/L1	(979)	5167	4972	2431893
423	26.6	7.2	1.5	chr22	19387224	19387353	(31431115)	+	MIRb	SINE/MIR	117	254	(14)	2431916
2221	8.4	1.9	4.7	chr22	19390311	19390630	(31427838)	+	AluSx1	SINE/Alu	1	311	(1)	2431918
729	20.2	5.9	10.8	chr22	19390751	19391000	(31427468)	C	L1ME2	LINE/L1	(477)	5685	5449	2431919
340	29.6	5.1	4.6	chr22	19394655	19394870	(31423598)	C	MER103C	DNA/hAT-Charlie	(34)	263	47	2431924
379	34.8	10.3	2.3	chr22	19395624	19395882	(31422586)	+	L2b	LINE/L2	3091	3372	(3)	2431926
890	26.4	14.8	1.6	chr22	19400592	19401041	(31417427)	+	L2a	LINE/L2	615	1134	(2285)	2431933
774	27.1	19.9	2.0	chr22	19401490	19402249	(31416219)	+	L2a	LINE/L2	2377	3412	(14)	2431933
759	33.0	12.2	7.1	chr22	19402266	19402823	(31415645)	C	L1M5	LINE/L1	(1570)	4576	3978	2431935
759	34.9	12.7	6.0	chr22	19403631	19404204	(31414264)	C	L1M5	LINE/L1	(2373)	3773	3138	2431935
203	29.6	3.9	6.7	chr22	19413280	19413384	(31405084)	+	MIRb	SINE/MIR	1	102	(166)	2431951
19	3.5	3.5	0.0	chr22	19413385	19413413	(31405055)	+	(ATTTT)n	Simple_repeat	1	30	(0)	2431952
876	25.5	19.5	2.6	chr22	19419272	19419722	(31398746)	+	L2a	LINE/L2	2871	3415	(11)	2431969
2407	6.2	0.7	0.0	chr22	19432933	19433224	(31385244)	C	AluSg7	SINE/Alu	(15)	294	1	2431998
1797	13.6	7.4	9.1	chr22	19437125	19437521	(31380947)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2432003
1082	16.6	0.6	0.0	chr22	19446707	19446869	(31371599)	C	AluJr	SINE/Alu	(15)	297	134	2432023
348	30.5	3.9	4.9	chr22	19468684	19468866	(31349602)	C	L1MC5	LINE/L1	(30)	9274	9094	2432054
6265	18.5	2.7	1.6	chr22	19489738	19490363	(31328105)	C	L1MD1	LINE/L1	(3454)	3083	2448	2432089
445	31.1	11.8	2.2	chr22	19512593	19512780	(31305688)	C	HAL1ME	LINE/L1	(68)	2397	2064	2432123
2308	13.5	4.9	1.9	chr22	19512781	19513195	(31305273)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	3	2432124
1967	10.5	1.4	0.0	chr22	19536838	19537141	(31281327)	C	AluSg	SINE/Alu	(0)	310	1	2432161
5195	16.8	8.0	4.0	chr22	19552623	19552947	(31265521)	C	L1MB5	LINE/L1	(1898)	4746	4427	2432196
2125	9.5	1.9	1.6	chr22	19552948	19553253	(31265215)	C	AluSq	SINE/Alu	(6)	307	1	2432199
1758	12.9	0.4	2.9	chr22	19578413	19578690	(31239778)	+	AluJr	SINE/Alu	42	312	(0)	2432251
894	25.5	9.3	0.7	chr22	19582461	19582744	(31235724)	+	L1MD	LINE/L1	2297	2607	(3539)	2432257
2146	15.4	0.0	0.0	chr22	19582751	19583056	(31235412)	+	AluSq2	SINE/Alu	3	308	(5)	2432258
1756	18.6	3.9	13.2	chr22	19640756	19640936	(31177532)	C	L1MB3	LINE/L1	(339)	5832	5661	2432361
323	31.8	4.2	3.3	chr22	19643390	19643622	(31174846)	C	L1ME3G	LINE/L1	(758)	166	18	2432365
9688	18.4	6.7	3.7	chr22	19648166	19648664	(31169804)	+	L1M4	LINE/L1	1398	1883	(5634)	2432369
32	5.4	0.0	0.0	chr22	19648665	19648703	(31169765)	+	(AACAA)n	Simple_repeat	1	39	(0)	2432373
9688	18.4	6.7	3.7	chr22	19648704	19649055	(31169413)	+	L1M4	LINE/L1	1884	2241	(5276)	2432369
870	13.9	3.4	7.0	chr22	19681243	19681383	(31137085)	+	L1MA10	LINE/L1	6196	6333	(1)	2432424
8325	17.0	5.5	5.3	chr22	19681384	19682759	(31135709)	+	L1MDa	LINE/L1	1012	2390	(4243)	2432423
1928	15.5	3.9	1.0	chr22	19682760	19683062	(31135406)	+	AluJr4	SINE/Alu	1	312	(0)	2432426
9543	15.0	8.3	3.9	chr22	19683508	19684555	(31133913)	+	L1MDa	LINE/L1	2501	3597	(2940)	2432423
328	33.9	7.3	3.2	chr22	19691016	19691265	(31127203)	C	L1MC4	LINE/L1	(1202)	6680	6420	2432436
16	8.3	0.0	0.0	chr22	19730565	19730590	(31087878)	+	(AGTG)n	Simple_repeat	1	26	(0)	2432487
13	9.6	0.0	0.0	chr22	19753952	19753974	(31064494)	+	(GTTT)n	Simple_repeat	1	23	(0)	2432504
2297	19.7	3.9	1.0	chr22	19774424	19774946	(31043522)	+	L1MB2	LINE/L1	5595	6133	(38)	2432522
889	13.7	2.2	0.0	chr22	19774948	19775078	(31043390)	C	AluJo	SINE/Alu	(178)	134	1	2432525
3905	19.2	4.8	1.8	chr22	19779977	19780770	(31037698)	C	L1MB3	LINE/L1	(0)	6291	5492	2432535
3898	18.3	2.9	0.5	chr22	19781402	19781841	(31036627)	C	L1MB3	LINE/L1	(850)	5290	4839	2432535
367	28.2	6.6	4.7	chr22	19790819	19790967	(31027501)	+	L1M7	LINE/L1	2344	2495	(3720)	2432543
1686	14.7	0.4	1.2	chr22	19790972	19791229	(31027239)	+	AluJr	SINE/Alu	24	279	(33)	2432547
2952	26.4	9.1	2.3	chr22	19793158	19794011	(31024457)	+	L1MEf	LINE/L1	1327	2368	(4475)	2432549
1781	26.9	13.3	10.2	chr22	19814394	19814789	(31003679)	+	L1MD3	LINE/L1	7229	7677	(318)	2432559
1722	17.5	0.0	1.1	chr22	19814790	19815057	(31003411)	+	AluJo	SINE/Alu	40	304	(8)	2432563
4349	27.1	11.6	2.5	chr22	19832579	19833424	(30985044)	+	L1MEf	LINE/L1	520	1419	(5221)	2432586
2194	10.4	1.7	0.0	chr22	19835413	19835701	(30982767)	+	AluSx3	SINE/Alu	16	309	(2)	2432590
5058	21.3	5.7	5.6	chr22	19835702	19836897	(30981571)	+	L1MEf	LINE/L1	3172	4363	(2181)	2432586
2344	22.9	8.0	5.2	chr22	19838163	19838459	(30980009)	+	L1ME1	LINE/L1	5297	5594	(585)	2432593
311	26.7	22.5	2.9	chr22	19847052	19847325	(30971143)	+	MLT1I	LTR/ERVL-MaLR	77	408	(3)	2432606
487	25.0	9.8	0.0	chr22	19855963	19856118	(30962350)	+	L5	LINE/RTE-X	2078	2250	(15)	2432614
6027	15.9	5.8	3.8	chr22	19857239	19858777	(30959691)	C	L1MB3	LINE/L1	(1)	6182	4633	2432617
5829	24.9	9.5	6.0	chr22	19864989	19866202	(30952266)	C	L1MEf	LINE/L1	(1768)	4378	3089	2432625
5829	23.0	21.2	4.3	chr22	19866513	19866856	(30951612)	C	L1MEf	LINE/L1	(3058)	3088	2680	2432625
1915	16.7	9.6	5.9	chr22	19893958	19894429	(30924039)	+	L1MB3	LINE/L1	5686	6176	(7)	2432653
894	21.9	1.2	0.0	chr22	19894484	19894647	(30923821)	+	FRAM	SINE/Alu	1	166	(10)	2432654
255	7.3	6.4	1.1	chr22	19909490	19910005	(30908463)	+	(AC)n	Simple_repeat	1	549	(0)	2432668
2071	18.5	6.7	2.8	chr22	19942683	19943183	(30875285)	C	MER67A	LTR/ERV1	(21)	522	1	2432714
818	24.7	2.9	5.3	chr22	19943187	19943365	(30875103)	C	MER31-int	LTR/ERV1	(24)	4912	4731	2432714
1949	15.8	2.6	0.0	chr22	19943366	19943669	(30874799)	+	AluJr	SINE/Alu	1	312	(0)	2432715
7558	8.4	2.6	0.5	chr22	19947258	19948243	(30870225)	C	LTR13	LTR/ERVK	(0)	1007	1	2432723
8520	17.9	2.8	2.8	chr22	20003064	20004342	(30814126)	+	L1MB2	LINE/L1	3320	4608	(1532)	2432779
184	30.8	4.4	0.0	chr22	20011038	20011102	(30807366)	+	L3	LINE/CR1	3945	4012	(87)	2432789
2215	12.3	0.3	1.6	chr22	20018798	20019113	(30799355)	+	AluSx1	SINE/Alu	1	312	(0)	2432798
368	34.5	3.5	1.8	chr22	20019178	20019345	(30799123)	+	L3	LINE/CR1	3825	3995	(104)	2432799
191	32.3	15.2	2.9	chr22	20022109	20022280	(30796188)	C	MIRc	SINE/MIR	(49)	219	23	2432802
2316	12.9	3.8	0.2	chr22	20026936	20027339	(30791129)	C	MSTA	LTR/ERVL-MaLR	(9)	419	1	2432807
350	32.2	10.3	4.9	chr22	20034216	20034501	(30783967)	C	L1MEg	LINE/L1	(5303)	781	474	2432817
2445	9.5	0.0	0.0	chr22	20039348	20039653	(30778815)	+	AluSz	SINE/Alu	2	307	(5)	2432824
2345	11.2	0.3	0.0	chr22	20051250	20051561	(30766907)	+	AluSp	SINE/Alu	1	313	(0)	2432849
1962	14.1	1.6	1.6	chr22	20051576	20051881	(30766587)	+	AluJb	SINE/Alu	7	312	(0)	2432850
3287	15.0	3.3	1.2	chr22	20058676	20059274	(30759194)	C	LTR51	LTR/ERV1	(0)	671	60	2432855
1918	20.9	4.6	5.6	chr22	20059275	20059960	(30758508)	C	L1MB8	LINE/L1	(418)	5766	4993	2432853
1737	15.5	1.4	3.4	chr22	20059961	20060068	(30758400)	C	AluJb	SINE/Alu	(17)	295	188	2432856
2574	5.9	0.0	0.0	chr22	20060069	20060372	(30758096)	+	AluY	SINE/Alu	2	305	(6)	2432857
1887	15.2	3.2	2.3	chr22	20067442	20067750	(30750718)	+	AluJo	SINE/Alu	1	312	(0)	2432866
1553	21.6	10.7	8.8	chr22	20067751	20067975	(30750493)	+	MLT1C	LTR/ERVL-MaLR	183	432	(35)	2432864
359	27.9	1.3	8.3	chr22	20071340	20071472	(30746996)	C	L1MC4a	LINE/L1	(32)	7850	7727	2432873
2634	14.1	4.5	3.8	chr22	20071474	20071953	(30746515)	C	MER31A	LTR/ERV1	(0)	485	2	2432876
1703	17.1	9.1	2.6	chr22	20071955	20072318	(30746150)	C	MER31-int	LTR/ERV1	(20)	4916	4525	2432876
2127	18.0	2.0	1.0	chr22	20076295	20076684	(30741784)	C	MER31-int	LTR/ERV1	(4540)	396	2	2432876
2487	13.3	9.9	1.1	chr22	20076687	20077126	(30741342)	C	MER31A	LTR/ERV1	(2)	483	1	2432876
1911	13.4	1.0	2.6	chr22	20079586	20079708	(30738760)	C	AluJr	SINE/Alu	(190)	122	1	2432891
387	29.2	6.2	4.5	chr22	20101019	20101194	(30717274)	C	MER21C	LTR/ERVL	(631)	307	129	2432916
2462	5.4	0.0	0.7	chr22	20101295	20101590	(30716878)	+	AluY	SINE/Alu	1	294	(17)	2432917
1558	26.6	7.7	1.8	chr22	20103155	20103478	(30714990)	C	L1ME1	LINE/L1	(1537)	4609	4273	2432918
378	27.3	10.3	7.2	chr22	20103483	20103978	(30714490)	C	L1ME1	LINE/L1	(2260)	3886	3318	2432918
14	25.2	0.0	5.3	chr22	20116722	20116778	(30701690)	+	(CCCTC)n	Simple_repeat	1	57	(0)	2432923
293	23.5	17.6	6.8	chr22	20118560	20118705	(30699763)	C	MIRb	SINE/MIR	(15)	253	89	2432927
2154	14.5	2.4	0.0	chr22	20128305	20128635	(30689833)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2432938
4676	11.7	8.7	4.6	chr22	20235521	20236321	(30582147)	+	LTR1A2	LTR/ERV1	1	837	(0)	2433033
801	20.3	0.6	0.6	chr22	20384061	20384219	(30434249)	C	MER5A1	DNA/hAT-Charlie	(4)	162	4	2433216
2659	19.5	1.8	0.0	chr22	20384220	20384757	(30433711)	C	L1MA7	LINE/L1	(755)	5388	4841	2433206
456	32.2	3.3	3.3	chr22	20393313	20393495	(30424973)	+	MIR	SINE/MIR	70	252	(10)	2433232
1274	25.0	13.3	7.7	chr22	20444075	20444431	(30374037)	+	MLT1E2	LTR/ERVL-MaLR	220	623	(4)	2433321
534	23.1	10.7	2.2	chr22	20444459	20444595	(30373873)	C	MER5A	DNA/hAT-Charlie	(39)	150	1	2433323
391	30.6	5.3	2.3	chr22	20475314	20475534	(30342934)	C	L1M5	LINE/L1	(985)	5161	4934	2433377
2104	10.4	0.3	1.0	chr22	20475565	20475861	(30342607)	C	AluSg	SINE/Alu	(15)	295	1	2433378
1018	15.0	0.6	2.3	chr22	20484732	20484904	(30333564)	C	AluJb	SINE/Alu	(11)	301	132	2433405
193	31.3	0.0	0.0	chr22	20485202	20485268	(30333200)	C	L2	LINE/L2	(1170)	2249	2183	2433406
1943	13.2	1.4	0.0	chr22	20494388	20494676	(30323792)	C	AluSx	SINE/Alu	(19)	293	1	2433425
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
324	24.2	15.2	2.6	chr22	20526434	20526628	(30291840)	C	HAL1	LINE/L1	(295)	2212	1989	2433497
288	16.1	0.4	0.4	chr22	20526693	20526750	(30291718)	C	AluSx	SINE/Alu	(234)	86	29	2433498
996	28.1	14.3	7.1	chr22	20527217	20527453	(30291015)	C	HAL1	LINE/L1	(1301)	1206	962	2433497
232	17.4	0.0	8.0	chr22	20546084	20546133	(30272335)	C	L1MC5a	LINE/L1	(345)	2432	2387	2433532
3271	15.4	3.1	4.5	chr22	20639785	20640449	(30178019)	+	L1MA4	LINE/L1	5641	6295	(5)	2433670
1699	13.3	5.4	0.4	chr22	20656294	20656572	(30161896)	C	HERV35I-int	LTR/ERV1	(4087)	2831	2538	2433708
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
6603	25.6	4.5	8.2	chr22	20663057	20664982	(30153486)	C	L1M1	LINE/L1	(4890)	2675	19	2433710
335	23.4	9.6	7.2	chr22	20701662	20701813	(30116655)	C	L1ME4c	LINE/L1	(333)	497	342	2433780
13	8.1	3.6	3.5	chr22	20702840	20702867	(30115601)	+	(GCA)n	Simple_repeat	1	29	(0)	2433782
1764	16.3	2.0	0.0	chr22	20759044	20759343	(30059125)	C	AluJr4	SINE/Alu	(6)	306	1	2433866
2226	12.5	0.0	1.0	chr22	20778219	20778523	(30039945)	+	AluSx	SINE/Alu	1	302	(10)	2433916
336	31.5	3.3	2.7	chr22	20784518	20784667	(30033801)	+	MIRb	SINE/MIR	118	268	(0)	2433927
864	23.5	6.1	5.3	chr22	20789127	20789306	(30029162)	+	MIR	SINE/MIR	18	200	(62)	2433933
30	2.9	0.0	2.7	chr22	20789307	20789343	(30029125)	+	(ATTT)n	Simple_repeat	1	37	(0)	2433934
2304	9.8	0.0	0.0	chr22	20789344	20789629	(30028839)	C	AluSx	SINE/Alu	(26)	286	1	2433935
275	26.6	15.8	0.0	chr22	20813021	20813174	(30005294)	+	MIRc	SINE/MIR	21	203	(65)	2433974
818	14.9	3.6	0.0	chr22	20816295	20816428	(30002040)	C	FLAM_C	SINE/Alu	(4)	139	1	2433981
412	22.3	1.9	1.9	chr22	20816524	20816645	(30001823)	+	FRAM	SINE/Alu	9	160	(6)	2433982
359	22.5	8.5	2.7	chr22	20823468	20823654	(29994814)	+	Tigger15a	DNA/TcMar-Tigger	467	665	(50)	2433998
19378	12.9	2.7	2.0	chr22	20828853	20830758	(29987710)	C	L1PA15	LINE/L1	(2182)	4584	2664	2434005
256	26.1	6.4	0.0	chr22	20838463	20838550	(29979918)	C	L1MC5a	LINE/L1	(1979)	798	705	2434024
991	13.5	0.7	0.7	chr22	20840735	20840875	(29977593)	+	AluJo	SINE/Alu	1	141	(171)	2434031
1623	7.1	0.0	0.0	chr22	20840880	20841090	(29977378)	+	MER41A	LTR/ERV1	1	211	(343)	2434032
2095	18.7	4.2	5.0	chr22	20841615	20841933	(29976535)	+	MLT1D	LTR/ERVL-MaLR	7	325	(180)	2434034
2465	7.8	0.0	0.0	chr22	20871601	20871894	(29946574)	+	AluY	SINE/Alu	1	294	(17)	2434100
966	14.4	0.0	0.0	chr22	20886155	20886286	(29932182)	C	FLAM_C	SINE/Alu	(10)	133	2	2434133
2271	10.7	1.3	1.0	chr22	20886299	20886608	(29931860)	C	AluSz	SINE/Alu	(1)	311	1	2434134
2128	8.9	2.2	0.0	chr22	20890794	20891062	(29927406)	+	AluYh3a3	SINE/Alu	1	275	(17)	2434141
2291	9.7	0.0	0.0	chr22	20933089	20933378	(29885090)	+	AluSc8	SINE/Alu	1	290	(21)	2434265
2206	10.8	0.3	0.3	chr22	20933385	20933681	(29884787)	+	AluSq2	SINE/Alu	1	297	(16)	2434266
667	23.4	0.0	0.0	chr22	20948674	20948797	(29869671)	C	FLAM_A	SINE/Alu	(17)	125	2	2434302
2053	10.9	0.7	1.4	chr22	20954745	20955028	(29863440)	C	AluSx	SINE/Alu	(29)	283	2	2434311
2145	6.6	0.0	1.8	chr22	20955056	20955329	(29863139)	+	AluSg7	SINE/Alu	31	299	(10)	2434312
2073	13.3	0.0	0.7	chr22	20959295	20959588	(29858880)	+	AluJb	SINE/Alu	1	292	(20)	2434325
18	0.0	0.0	0.0	chr22	20959708	20959730	(29858738)	+	(TTTG)n	Simple_repeat	1	23	(0)	2434326
2321	9.9	0.0	3.1	chr22	20959734	20960055	(29858413)	C	AluSx1	SINE/Alu	(0)	312	1	2434327
2084	7.0	0.4	0.0	chr22	20969437	20969692	(29848776)	C	AluY	SINE/Alu	(18)	293	37	2434344
245	27.9	0.0	0.0	chr22	20981567	20981623	(29836845)	C	L2b	LINE/L2	(341)	3085	3026	2434356
2320	10.2	0.0	0.3	chr22	21020580	21020874	(29797594)	C	AluSx	SINE/Alu	(1)	311	18	2434410
2729	25.8	3.1	4.9	chr22	21105750	21106776	(29711692)	C	L1MA6	LINE/L1	(52)	6248	5227	2434587
341	28.7	11.3	1.2	chr22	21452114	21452367	(29366101)	C	HAL1	LINE/L1	(0)	2507	2225	2435180
1057	17.7	1.2	0.0	chr22	21556249	21556412	(29262056)	+	FRAM	SINE/Alu	1	166	(10)	2435411
1661	14.9	0.0	9.5	chr22	21556426	21556761	(29261707)	C	AluJb	SINE/Alu	(8)	304	1	2435412
364	30.5	12.9	5.0	chr22	21566600	21566848	(29251620)	+	L2b	LINE/L2	2822	3122	(253)	2435437
569	25.9	7.5	3.4	chr22	21566846	21567049	(29251419)	+	MIRb	SINE/MIR	29	241	(27)	2435440
2181	9.8	0.0	0.0	chr22	21567166	21567462	(29251006)	C	AluSx3	SINE/Alu	(14)	297	1	2435441
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
2056	11.2	0.0	0.0	chr22	21574685	21574970	(29243498)	+	AluSg	SINE/Alu	1	286	(24)	2435452
419	29.7	13.3	6.0	chr22	21588015	21588415	(29230053)	C	L3	LINE/CR1	(1657)	2442	2008	2435475
2172	11.2	0.0	0.3	chr22	21600030	21600343	(29218125)	+	AluSq2	SINE/Alu	1	313	(0)	2435505
2212	9.3	0.0	2.6	chr22	21607225	21607537	(29210931)	+	AluSx1	SINE/Alu	1	305	(7)	2435525
1467	15.5	2.7	4.7	chr22	21614682	21614872	(29203596)	+	L1MB7	LINE/L1	5593	5780	(404)	2435539
2464	8.4	0.0	0.3	chr22	21614873	21615183	(29203285)	+	AluSq2	SINE/Alu	2	311	(2)	2435540
16	9.8	0.0	0.0	chr22	21698262	21698283	(29120185)	+	(A)n	Simple_repeat	1	22	(0)	2435702
2375	8.4	0.0	1.3	chr22	21840827	21841125	(28977343)	C	AluSx3	SINE/Alu	(16)	295	1	2436020
2121	16.9	10.3	8.4	chr22	21841126	21841162	(28977306)	+	L1MB7	LINE/L1	6149	6182	(2)	2436015
2688	16.9	8.8	1.8	chr22	21841172	21841733	(28976735)	+	L1MC3	LINE/L1	6790	7394	(391)	2436021
3019	13.8	7.6	12.5	chr22	21844425	21844872	(28973596)	+	L1MB2	LINE/L1	5577	6053	(118)	2436029
2249	7.4	5.3	0.0	chr22	21844873	21845157	(28973311)	+	AluY	SINE/Alu	1	301	(10)	2436031
3569	23.6	9.6	4.9	chr22	21890199	21891019	(28927449)	+	L1MB4	LINE/L1	1071	1895	(4751)	2436143
3066	24.1	4.7	5.7	chr22	21900372	21900895	(28917573)	C	L1MD2	LINE/L1	(5022)	1618	1097	2436165
345	29.2	6.1	0.7	chr22	21972203	21972357	(28846111)	+	L1ME4a	LINE/L1	5961	6124	(0)	2436291
529	18.7	10.6	4.0	chr22	22010743	22010809	(28807659)	+	L1MEh	LINE/L1	1011	1087	(1148)	2436369
619	14.9	1.8	0.0	chr22	22010810	22010916	(28807552)	C	MER81	DNA/hAT-Blackjack	(1)	113	5	2436370
529	18.7	10.6	4.0	chr22	22010917	22011076	(28807392)	+	L1MEh	LINE/L1	1088	1255	(980)	2436369
13	23.3	2.5	0.0	chr22	22090880	22090919	(28727549)	+	A-rich	Low_complexity	1	41	(0)	2436462
392	31.8	6.4	1.1	chr22	22090920	22091097	(28727371)	+	L1MEg1	LINE/L1	3544	3731	(3506)	2436460
3572	12.2	3.4	1.6	chr22	22109629	22110335	(28708133)	C	LTR60	LTR/ERV1	(10)	755	3	2436489
1265	12.9	5.9	2.8	chr22	22196994	22197208	(28621260)	+	MER30	DNA/hAT-Charlie	9	230	(0)	2436575
2443	6.4	2.6	0.0	chr22	22209138	22209435	(28609033)	+	AluYk4	SINE/Alu	1	306	(5)	2436595
20	25.2	0.0	4.2	chr22	22359266	22359336	(28459132)	+	(TATT)n	Simple_repeat	1	71	(0)	2436785
8721	14.6	4.3	1.9	chr22	22359339	22361738	(28456730)	C	L1PB1	LINE/L1	(0)	6151	3590	2436786
817	17.8	1.1	2.7	chr22	22461104	22461288	(28357180)	C	MER51-int	LTR/ERV1	(3681)	4135	3954	2436872
357	20.0	7.4	0.0	chr22	22461314	22461388	(28357080)	C	HUERS-P3-int	LTR/ERV1	(484)	6934	6854	2436873
1671	22.9	0.0	0.3	chr22	22461408	22461727	(28356741)	C	HUERS-P3-int	LTR/ERV1	(2007)	6912	6594	2436873
12	18.8	9.5	1.4	chr22	31764716	31764760	(19053708)	+	(TCTTCCT)n	Simple_repeat	7	53	(0)	2455571
1846	15.3	17.1	1.1	chr22	39066094	39066470	(11751998)	C	LTR7	LTR/ERV1	(0)	450	1	2470808
924	10.6	8.2	2.7	chr22	39066471	39066654	(11751814)	C	HERVH-int	LTR/ERV1	(0)	7713	7519	2470808
2875	15.6	12.1	0.2	chr22	40814035	40814665	(10003803)	+	LTR62	LTR/ERVL	1	709	(0)	2474419
204	30.6	1.8	4.4	chr22	41845930	41846042	(8972426)	C	L2c	LINE/L2	(243)	3144	3035	2476908
389	28.3	7.0	0.0	chr22	41846163	41846282	(8972186)	C	MLT1N2	LTR/ERVL-MaLR	(2)	560	432	2476909
698	26.2	7.5	0.5	chr3	4987603	4987824	(193307735)	C	MIR	SINE/MIR	(22)	240	2	2499901
6735	7.8	4.4	1.0	chr3	5081627	5082560	(193212999)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2500157
1828	15.7	1.3	5.3	chr3	5108113	5108430	(193187129)	C	AluSx	SINE/Alu	(7)	305	1	2500221
449	28.0	3.6	2.2	chr3	5108529	5108653	(193186906)	C	MIR3	SINE/MIR	(21)	187	60	2500222
2048	12.5	0.3	2.7	chr3	5108654	5108950	(193186609)	C	AluSx	SINE/Alu	(22)	290	1	2500223
11	13.4	5.7	2.7	chr3	5430032	5430066	(192865493)	+	(GGAACCA)n	Simple_repeat	1	37	(0)	2500809
428	31.5	14.2	8.8	chr3	5437605	5438161	(192857398)	C	L3	LINE/CR1	(1054)	3045	2454	2500821
312	19.3	0.0	0.0	chr3	5438174	5438230	(192857329)	+	MER91B	DNA/hAT-Tip100	36	92	(98)	2500822
2600	12.6	7.2	1.1	chr3	5508718	5509159	(192786400)	C	LTR7C	LTR/ERV1	(0)	471	1	2500950
435	32.0	5.1	4.7	chr3	5509160	5509311	(192786248)	+	MIRb	SINE/MIR	93	250	(18)	2500949
2402	7.7	0.0	2.6	chr3	9646176	9646486	(188649073)	C	AluY	SINE/Alu	(8)	303	1	2507663
1509	17.0	4.5	9.8	chr3	9646487	9646561	(188648998)	C	LTR54	LTR/ERV1	(184)	326	259	2507660
2144	12.6	0.0	4.0	chr3	9646562	9646886	(188648673)	+	AluSx	SINE/Alu	1	312	(0)	2507664
228	29.5	0.5	13.7	chr3	9786410	9786566	(188508993)	C	MIRc	SINE/MIR	(57)	151	20	2507955
265	29.4	18.8	0.7	chr3	9786496	9786669	(188508890)	+	MIRb	SINE/MIR	19	240	(28)	2507956
447	27.4	10.0	0.5	chr3	9786681	9786841	(188508718)	+	L1ME3A	LINE/L1	5978	6148	(14)	2507957
184	31.2	20.0	0.0	chr3	9976506	9976617	(188318942)	+	L3	LINE/CR1	3904	4043	(56)	2508391
732	18.1	11.4	5.0	chr3	9979221	9979400	(188316159)	+	MER5C1	DNA/hAT-Charlie	71	263	(0)	2508394
536	28.5	2.1	0.0	chr3	9979402	9979538	(188316021)	+	MIR	SINE/MIR	4	143	(119)	2508395
347	30.8	6.6	4.0	chr3	12165858	12166033	(186129526)	+	MIRc	SINE/MIR	3	183	(85)	2512796
2207	10.2	2.1	0.0	chr3	12173634	12173918	(186121641)	+	AluSg4	SINE/Alu	1	291	(19)	2512809
1138	27.9	14.1	2.3	chr3	12173919	12174352	(186121207)	+	L2a	LINE/L2	2009	2507	(912)	2512808
198	38.4	3.2	1.3	chr3	12999813	12999965	(185295594)	+	L2	LINE/L2	2737	2892	(527)	2514447
482	25.5	7.2	2.8	chr3	13000093	13000306	(185295253)	+	L1M5	LINE/L1	5254	5477	(647)	2514448
335	21.7	2.2	0.0	chr3	13087407	13087494	(185208065)	+	MIRb	SINE/MIR	85	175	(93)	2514618
315	25.2	9.3	0.0	chr3	13087560	13087666	(185207893)	C	MER113	DNA/hAT-Charlie	(66)	455	338	2514619
1801	18.0	17.2	1.4	chr3	13405062	13405543	(184890016)	+	MLT2B4	LTR/ERVL	117	682	(35)	2515167
546	25.6	17.4	0.5	chr3	13546449	13546648	(184748911)	C	MIR	SINE/MIR	(0)	262	22	2515487
508	30.4	1.8	0.6	chr3	13650942	13651110	(184644449)	+	Charlie4a	DNA/hAT-Charlie	216	386	(122)	2515684
3936	9.3	3.3	0.0	chr3	14120797	14121357	(184174202)	C	LTR19B	LTR/ERV1	(0)	580	1	2516330
379	25.3	9.9	4.7	chr3	14179214	14179404	(184116155)	C	L2a	LINE/L2	(0)	3426	3225	2516419
400	32.1	13.0	8.9	chr3	15305366	15305768	(182989791)	C	L2b	LINE/L2	(14)	3361	2940	2518532
312	26.9	9.7	0.0	chr3	20323561	20323653	(177971906)	C	LTR46	LTR/ERV1	(357)	103	1	2526022
394	34.6	3.1	2.6	chr3	20323680	20323869	(177971690)	C	L2b	LINE/L2	(185)	3190	3000	2526021
6858	9.4	0.5	1.0	chr3	20351531	20352949	(177942610)	C	L1MA1	LINE/L1	(5)	6297	4886	2526058
215	32.7	0.0	0.0	chr3	20353037	20353091	(177942468)	C	MamRTE1	LINE/RTE-BovB	(397)	3415	3361	2526059
2110	13.8	11.1	2.4	chr3	32796461	32796870	(165498689)	C	LTR7	LTR/ERV1	(0)	450	1	2544695
589	10.4	0.0	0.0	chr3	32796871	32796947	(165498612)	C	AluSc5	SINE/Alu	(109)	200	124	2544696
1944	13.0	0.7	4.6	chr3	32796948	32797270	(165498289)	C	AluSq	SINE/Alu	(2)	311	2	2544697
272	17.6	4.2	5.6	chr3	33097529	33097600	(165197959)	+	MER5A	DNA/hAT-Charlie	5	75	(114)	2545278
2330	6.8	0.0	0.0	chr3	33097601	33097878	(165197681)	+	AluSq2	SINE/Alu	15	292	(21)	2545279
2231	9.1	0.3	0.3	chr3	33905324	33905609	(164389950)	C	AluSc8	SINE/Alu	(25)	286	1	2546659
1583	22.4	3.0	1.3	chr3	33905611	33905999	(164389560)	C	Charlie4a	DNA/hAT-Charlie	(75)	433	38	2546660
427	32.3	7.7	6.6	chr3	36958021	36958355	(161337204)	+	L2c	LINE/L2	3049	3387	(0)	2550713
34	29.6	1.4	3.3	chr3	37999041	37999188	(160296371)	+	(GGCGG)n	Simple_repeat	1	150	(0)	2552384
1090	20.1	20.6	6.2	chr3	40456791	40456943	(157838616)	+	L1MC4	LINE/L1	7845	8041	(1)	2556016
1903	13.6	4.0	0.0	chr3	40463974	40464259	(157831300)	C	AluSx	SINE/Alu	(14)	298	1	2556031
521	18.9	5.4	0.9	chr3	43584248	43584354	(154711205)	+	LTR18B	LTR/ERVL	1	112	(502)	2560826
1592	12.0	11.6	0.3	chr3	43584379	43584670	(154710889)	+	LTR18B	LTR/ERVL	286	614	(0)	2560826
3193	9.2	1.9	0.2	chr3	43678308	43678762	(154616797)	+	LTR2	LTR/ERV1	1	463	(0)	2560981
565	14.1	20.2	0.0	chr3	43687169	43687267	(154608292)	+	AluJo	SINE/Alu	1	124	(188)	2560989
2423	6.8	1.7	0.0	chr3	43690061	43690354	(154605205)	C	AluSp	SINE/Alu	(14)	299	1	2560994
247	25.7	15.1	0.0	chr3	43692654	43692754	(154602805)	C	MIRb	SINE/MIR	(93)	175	57	2560996
1771	8.3	4.2	0.0	chr3	44437556	44437784	(153857775)	C	PRIMA41-int	LTR/ERV1	(7515)	241	3	2562099
234	10.5	9.5	0.0	chr3	44437872	44437909	(153857650)	C	MER41C	LTR/ERV1	(0)	521	480	2562099
892	8.2	0.0	0.0	chr3	44437901	44438010	(153857549)	C	MER41C	LTR/ERV1	(411)	110	1	2562099
366	11.3	0.0	0.0	chr3	44438012	44438064	(153857495)	C	MER41A	LTR/ERV1	(580)	54	2	2562097
4308	8.9	3.0	2.7	chr3	44441213	44441528	(153854031)	C	MER41B	LTR/ERV1	(320)	314	1	2562107
288	25.4	6.3	6.9	chr3	44441529	44441540	(153854019)	C	L1ME3G	LINE/L1	(445)	479	468	2562106
208	34.8	2.8	0.0	chr3	44441542	44441610	(153853949)	C	MIRc	SINE/MIR	(129)	139	69	2562109
3794	6.2	0.2	0.2	chr3	44522608	44523078	(153772481)	+	LTR7C	LTR/ERV1	1	471	(0)	2562250
646	27.1	6.3	3.2	chr3	44648119	44648469	(153647090)	+	L1MC5a	LINE/L1	2400	2764	(13)	2562450
5739	5.7	1.0	0.0	chr3	45053730	45054413	(153241146)	C	LTR8	LTR/ERV1	(0)	691	1	2563131
321	2.6	0.0	0.0	chr3	45061246	45061284	(153234275)	+	MER4C	LTR/ERV1	1	39	(426)	2563146
3845	11.1	0.7	2.0	chr3	45061285	45061704	(153233855)	+	MER41A	LTR/ERV1	1	415	(139)	2563147
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
312	31.9	11.1	3.1	chr3	45104561	45104751	(153190808)	C	MIRb	SINE/MIR	(54)	214	7	2563232
376	29.3	5.7	0.8	chr3	45716058	45716191	(152579368)	C	L2	LINE/L2	(419)	3000	2860	2564338
1763	17.4	2.8	1.1	chr3	45716192	45716472	(152579087)	+	AluJr	SINE/Alu	1	286	(26)	2564339
1388	22.3	9.1	2.9	chr3	46027905	46028297	(152267262)	+	LTR27D	LTR/ERV1	166	782	(62)	2564805
4037	19.2	3.9	3.6	chr3	46028311	46028579	(152266980)	C	L1M4	LINE/L1	(749)	5425	5164	2564806
2527	15.1	7.2	0.5	chr3	46326736	46327174	(151968385)	C	LTR7C	LTR/ERV1	(0)	471	1	2565239
3105	13.7	4.1	0.9	chr3	46327175	46327698	(151967861)	C	HERVH-int	LTR/ERV1	(0)	7713	7173	2565239
2392	16.2	7.0	0.7	chr3	46387685	46388125	(151907434)	C	LTR7C	LTR/ERV1	(0)	471	1	2565323
4023	9.0	0.5	1.4	chr3	46388126	46388687	(151906872)	C	HERVH-int	LTR/ERV1	(0)	7713	7157	2565323
294	17.2	0.0	4.9	chr3	46509178	46509197	(151786362)	C	MLT2B2	LTR/ERVL	(43)	519	500	2565502
834	11.5	0.0	0.0	chr3	46509199	46509311	(151786248)	+	MER83	LTR/ERV1	1	113	(335)	2565504
1667	13.3	8.2	6.7	chr3	46509386	46509731	(151785828)	+	MER83	LTR/ERV1	97	448	(0)	2565504
1775	26.1	15.7	3.5	chr3	47315159	47316335	(150979224)	+	HAL1	LINE/L1	187	1519	(988)	2566906
2422	17.2	7.2	0.9	chr3	51755826	51756266	(146539293)	C	LTR7C	LTR/ERV1	(0)	471	1	2574918
2488	13.9	0.8	1.2	chr3	51756267	51756666	(146538893)	C	HERVH-int	LTR/ERV1	(0)	7713	7316	2574918
1736	15.7	18.1	1.7	chr3	53354817	53355238	(144940321)	C	LTR54	LTR/ERV1	(3)	507	1	2577507
533	34.3	1.0	6.9	chr3	53355239	53355353	(144940206)	+	L2a	LINE/L2	3014	3117	(309)	2577506
12	11.1	6.9	0.0	chr3	98584064	98584092	(99711467)	+	A-rich	Low_complexity	1	31	(0)	2639125
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
7792	4.7	1.8	0.1	chr3	100272494	100273445	(98022114)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2641450
3521	10.5	3.6	1.1	chr3	100273446	100273923	(98021636)	+	L1PREC2	LINE/L1	4572	5065	(1081)	2641449
52313	17.9	1.7	1.8	chr3	101632600	101641508	(96654051)	+	HERVS71-int	LTR/ERV1	4	8909	(69)	2643354
3707	12.2	3.0	0.2	chr3	101641509	101642056	(96653503)	+	LTR6A	LTR/ERV1	1	564	(0)	2643355
712	20.8	2.6	7.5	chr3	101643829	101643989	(96651570)	+	L1M5	LINE/L1	5608	5760	(483)	2643340
4184	11.3	3.8	0.8	chr3	101643990	101644474	(96651085)	+	MER41B	LTR/ERV1	1	508	(126)	2643360
6344	12.8	1.7	0.5	chr3	118539850	118540839	(79754720)	C	LTR5B	LTR/ERVK	(0)	1002	1	2666315
583	26.8	8.2	1.1	chr3	118938296	118938476	(79357083)	+	MER102c	DNA/hAT-Charlie	136	330	(1)	2666897
2605	26.3	5.5	2.0	chr3	118938829	118939293	(79356266)	+	L1ME1	LINE/L1	2377	2873	(3273)	2666898
1435	16.5	2.1	0.0	chr3	126247095	126247330	(72048229)	C	LTR1F1	LTR/ERV1	(0)	824	584	2678295
2670	13.9	6.8	0.5	chr3	126247331	126247771	(72047788)	+	LTR7C	LTR/ERV1	1	471	(0)	2678296
4361	8.5	2.4	0.0	chr3	129413215	129413779	(68881780)	+	LTR19B	LTR/ERV1	2	580	(0)	2683699
3986	13.8	4.5	2.8	chr3	141312045	141312735	(56982824)	C	LTR62	LTR/ERVL	(5)	704	1	2702098
16	8.3	0.0	0.0	chr3	141353707	141353732	(56941827)	+	(TGAA)n	Simple_repeat	1	26	(0)	2702170
275	27.6	3.3	2.2	chr3	141361353	141361441	(56934118)	+	MIR1_Amn	SINE/MIR	32	121	(109)	2702186
215	14.9	18.3	4.3	chr3	141361456	141361525	(56934034)	C	MIRc	SINE/MIR	(128)	140	59	2702187
180	36.4	0.0	1.0	chr3	141361529	141361628	(56933931)	+	MIRc	SINE/MIR	160	258	(10)	2702188
36145	3.7	0.4	2.0	chr3	142438293	142442703	(55852856)	+	HERV17-int	LTR/ERV1	1679	6019	(2607)	2704139
2547	11.1	6.0	2.3	chr3	143072320	143072752	(55222807)	C	LTR7	LTR/ERV1	(0)	450	1	2705147
1487	21.6	13.1	2.5	chr3	143072753	143072871	(55222688)	C	MLT1D	LTR/ERVL-MaLR	(390)	115	1	2705146
3869	18.2	3.3	4.6	chr3	143084616	143085413	(55210146)	C	MER54A	LTR/ERVL	(126)	775	1	2705164
280	31.6	8.7	0.4	chr3	149233635	149233749	(49061810)	+	MIR	SINE/MIR	2	122	(140)	2713262
374	28.0	19.2	0.0	chr3	150451603	150451745	(47843814)	+	MIRb	SINE/MIR	24	200	(68)	2715238
658	24.7	13.1	0.0	chr3	150451877	150452062	(47843497)	C	AluJr	SINE/Alu	(13)	299	86	2715239
249	35.8	0.0	3.6	chr3	152327245	152327328	(45968231)	C	L2b	LINE/L2	(0)	3375	3295	2718041
2182	13.8	0.3	0.3	chr3	152327337	152327647	(45967912)	C	AluSz	SINE/Alu	(0)	312	2	2718042
3495	8.7	0.4	0.0	chr3	155282777	155283245	(43012314)	C	LTR7C	LTR/ERV1	(0)	471	1	2722264
378	22.1	4.6	2.8	chr3	156620256	156620362	(41675197)	C	MIR	SINE/MIR	(6)	256	148	2724312
2283	13.9	7.6	0.0	chr3	156620366	156620695	(41674864)	+	LTR18A	LTR/ERVL	1	357	(0)	2724313
2074	8.6	20.0	0.3	chr3	168932955	168933315	(29362244)	C	LTR7	LTR/ERV1	(0)	450	1	2740714
1491	11.7	1.6	1.2	chr3	168933318	168933559	(29362000)	C	THE1A	LTR/ERVL-MaLR	(112)	243	1	2740712
266	29.1	12.0	0.0	chr3	171447542	171447644	(26847915)	+	MIRb	SINE/MIR	30	146	(122)	2744535
9084	5.3	0.5	10.3	chr3	179031977	179033503	(19262056)	+	SVA_B	Retroposon/SVA	1	1377	(6)	2755523
2032	11.8	1.4	0.0	chr3	185575733	185576004	(12719555)	+	AluSx1	SINE/Alu	31	306	(6)	2766660
939	15.4	0.6	5.1	chr3	195161940	195162114	(3133445)	+	AluJb	SINE/Alu	134	300	(12)	2782457
380	22.2	13.1	2.3	chr3	195162117	195162245	(3133314)	C	MIRb	SINE/MIR	(118)	150	6	2782458
3448	12.3	11.4	1.4	chr3	196842744	196843192	(1452367)	C	MER41B	LTR/ERV1	(124)	510	1	2785874
2252	24.8	3.7	4.0	chr3	196843223	196843275	(1452284)	C	LTR82A	LTR/ERVL	(0)	872	833	2785876
1823	14.7	4.2	0.0	chr3	196843276	196843568	(1451991)	C	AluJb	SINE/Alu	(4)	308	3	2785877
7969	6.3	23.6	0.1	chr4	6672541	6673747	(183540808)	+	LTR12C	LTR/ERV1	2	1579	(0)	2798852
313	7.5	0.0	0.0	chr4	23496361	23496400	(166718155)	+	LTR7B	LTR/ERV1	1	40	(424)	2825630
2457	16.2	6.8	0.2	chr4	23496421	23496860	(166717695)	+	LTR7C	LTR/ERV1	1	471	(0)	2825631
256	29.3	10.7	0.0	chr4	38317247	38317379	(151897176)	+	MIRc	SINE/MIR	80	228	(40)	2847575
3999	9.2	1.4	4.4	chr4	38317443	38317888	(151896667)	+	MER41A	LTR/ERV1	1	439	(115)	2847576
2398	6.7	0.3	0.3	chr4	38573304	38573602	(151640953)	C	AluY	SINE/Alu	(12)	299	1	2848016
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
235	33.9	13.5	2.4	chr4	73246561	73246895	(116967660)	C	L2	LINE/L2	(1052)	2367	1990	2894632
3992	10.3	0.4	1.1	chr4	74096175	74096724	(116117831)	C	MER41B	LTR/ERV1	(88)	546	1	2895701
219	34.4	4.3	7.1	chr4	78691909	78692077	(111522478)	C	L2c	LINE/L2	(228)	3159	2996	2902571
887	21.6	3.7	0.6	chr4	80143909	80144090	(110070465)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	2904451
2357	11.0	0.0	0.0	chr4	80144194	80144493	(110070062)	+	AluSx3	SINE/Alu	1	300	(11)	2904452
3916	10.5	2.8	0.0	chr4	83495985	83496544	(106718011)	C	LTR19B	LTR/ERV1	(0)	580	5	2909647
2102	10.6	4.0	0.7	chr4	102872077	102872369	(87342186)	C	AluSx3	SINE/Alu	(8)	303	1	2936286
4509	14.2	4.4	0.7	chr4	123349123	123349802	(66864753)	C	LTR62	LTR/ERVL	(2)	707	2	2963818
1164	29.0	9.4	2.9	chr4	140529556	140530031	(49684524)	+	L2a	LINE/L2	2917	3426	(0)	2986363
246	21.1	5.7	5.1	chr4	169098769	169098861	(21115694)	+	MIR1_Amn	SINE/MIR	83	167	(41)	3025811
497	28.3	13.7	8.9	chr4	184537191	184537727	(5676828)	+	L1M6	LINE/L1	43	613	(5883)	3046748
1723	15.4	7.5	0.3	chr4	184537728	184538047	(5676508)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3046749
23124	11.8	1.4	0.0	chr4	190108264	190111540	(103015)	C	HERVK-int	LTR/ERVK	(1208)	6328	3007	3054628
2051	26.6	8.9	2.1	chr5	10294577	10295021	(171243238)	C	L2a	LINE/L2	(617)	2802	2332	3066630
3171	18.1	5.1	7.2	chr5	10303607	10304078	(171234181)	+	MER72	LTR/ERV1	15	494	(228)	3066651
213	24.1	1.2	7.8	chr5	10351793	10351882	(171186377)	+	MIR	SINE/MIR	179	262	(0)	3066753
531	24.9	8.4	2.0	chr5	10589189	10589389	(170948870)	+	MER54A	LTR/ERVL	373	587	(314)	3067192
4449	24.7	7.2	1.4	chr5	12614767	12616035	(168922224)	+	MLT1F2-int	LTR/ERVL-MaLR	120	1467	(22)	3069781
2042	21.0	2.5	5.5	chr5	16417402	16417906	(165120353)	C	MER65B	LTR/ERV1	(42)	489	1	3074970
2350	15.5	3.3	3.5	chr5	16417910	16418338	(165119921)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	7	3074971
3610	12.3	2.3	0.4	chr5	36442167	36442687	(145095572)	C	MER61E	LTR/ERV1	(38)	531	1	3102806
2017	13.2	1.4	1.0	chr5	40825714	40826008	(140712251)	C	AluSx	SINE/Alu	(16)	296	1	3109499
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
2783	11.8	6.8	0.9	chr5	43607164	43607606	(137930653)	+	LTR7C	LTR/ERV1	1	471	(0)	3113341
2026	11.6	17.3	0.3	chr5	44110488	44110860	(137427399)	C	LTR7	LTR/ERV1	(0)	450	1	3113898
1446	10.2	2.5	0.4	chr5	44110861	44111087	(137427172)	C	HERVH-int	LTR/ERV1	(0)	7713	7481	3113898
1895	16.4	7.1	0.5	chr5	54386389	54386770	(127151489)	+	MLT1A1	LTR/ERVL-MaLR	1	457	(0)	3121632
4433	7.1	1.4	2.9	chr5	74591530	74591966	(106946293)	C	MER41A	LTR/ERV1	(109)	445	1	3152193
423	26.2	3.1	1.6	chr5	74592001	74592128	(106946131)	+	Charlie2a	DNA/hAT-Charlie	6	135	(2726)	3152195
3815	15.6	9.9	0.0	chr5	76363645	76364293	(105173966)	+	MER72	LTR/ERV1	3	722	(0)	3154887
2185	10.2	16.9	0.3	chr5	76789188	76789562	(104748697)	C	LTR7	LTR/ERV1	(0)	450	1	3155619
1521	14.2	0.4	0.4	chr5	76789565	76789790	(104748469)	C	AluSx	SINE/Alu	(63)	249	24	3155620
831	35.3	14.1	3.6	chr5	89132602	89134136	(92404123)	+	L2b	LINE/L2	698	2420	(999)	3173191
4249	4.9	1.6	0.2	chr5	95707337	95707886	(85830373)	C	LTR6B	LTR/ERV1	(0)	558	1	3181553
2278	8.3	0.9	0.0	chr5	95707887	95708199	(85830060)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	3181554
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
195	26.3	1.1	6.2	chr5	95729290	95729364	(85808895)	+	L2c	LINE/L2	3263	3349	(38)	3181578
1528	18.7	3.7	0.9	chr5	95729571	95729915	(85808344)	C	L1MB2	LINE/L1	(62)	6109	5755	3181580
3909	9.7	1.4	0.0	chr5	96808822	96809367	(84728892)	C	MER41A	LTR/ERV1	(0)	554	1	3183135
2236	13.6	0.0	0.0	chr5	98440585	98440886	(83097373)	+	AluY	SINE/Alu	1	302	(9)	3185121
2421	15.7	6.8	0.9	chr5	98440895	98441337	(83096922)	+	LTR7C	LTR/ERV1	1	471	(0)	3185120
2356	12.5	10.2	1.9	chr5	101156037	101156467	(80381792)	C	LTR7C	LTR/ERV1	(0)	471	1	3188609
817	17.8	4.5	1.7	chr5	103057143	103057314	(78480945)	C	MER57A-int	LTR/ERV1	(5174)	1013	837	3190904
2326	11.9	0.1	2.6	chr5	103057315	103057717	(78480542)	+	MER41A	LTR/ERV1	1	436	(198)	3190911
1042	25.0	4.2	3.2	chr5	108531424	108532124	(73006135)	+	MER61E	LTR/ERV1	1	728	(0)	3197775
46401	5.2	1.2	0.1	chr5	112444459	112450410	(69087849)	+	HERV17-int	LTR/ERV1	1	6017	(2609)	3202771
5875	14.7	1.2	2.9	chr5	112547994	112548932	(68989327)	+	MER49	LTR/ERV1	1	923	(0)	3202895
1829	20.1	6.3	3.5	chr5	126702901	126703329	(54834930)	C	LTR7C	LTR/ERV1	(5)	466	25	3221751
1952	24.4	6.5	1.7	chr5	131368917	131369619	(50168640)	C	L1ME3B	LINE/L1	(54)	6188	5446	3227848
543	23.2	12.8	9.7	chr5	131372728	131372923	(50165336)	+	MIRb	SINE/MIR	44	246	(22)	3227855
333	34.0	9.4	0.1	chr5	131747239	131747403	(49790856)	+	L4_A_Mam	LINE/RTE-X	4124	4330	(660)	3228460
2103	13.5	0.7	0.7	chr5	132177939	132178234	(49360025)	C	AluSz	SINE/Alu	(16)	296	1	3228995
356	25.2	10.0	4.3	chr5	135051551	135051691	(46486568)	C	MIRb	SINE/MIR	(92)	176	27	3233819
278	35.0	5.7	0.5	chr5	135134317	135134500	(46403759)	+	L3	LINE/CR1	3754	3947	(152)	3233930
5268	9.9	0.7	2.7	chr5	136382624	136382884	(45155375)	C	L1PA11	LINE/L1	(0)	6174	5918	3235597
2092	15.4	11.7	2.4	chr5	136382885	136383310	(45154949)	+	LTR7C	LTR/ERV1	1	471	(0)	3235598
1192	18.0	4.5	0.5	chr5	138469469	138469662	(43068597)	C	AluJb	SINE/Alu	(26)	286	85	3238922
237	16.2	0.0	0.0	chr5	138469763	138469799	(43068460)	C	MER77B	LTR/ERVL	(282)	418	382	3238923
3053	9.3	0.4	4.5	chr5	138834780	138835263	(42702996)	C	LTR7B	LTR/ERV1	(0)	464	1	3239696
1092	14.0	0.0	0.0	chr5	139285535	139285684	(42252575)	+	AluSp	SINE/Alu	145	294	(19)	3240485
1096	17.9	16.4	0.1	chr5	139285685	139286089	(42252170)	+	L1M3c	LINE/L1	1791	2263	(4526)	3240486
186	25.3	14.4	0.0	chr5	139635751	139635833	(41902426)	C	MIR	SINE/MIR	(134)	128	32	3241227
225	27.1	15.3	4.7	chr5	140186621	140186748	(41351511)	+	L2a	LINE/L2	3283	3426	(0)	3242145
1423	28.4	13.1	3.7	chr5	148639077	148639617	(32898642)	+	L2a	LINE/L2	2646	3246	(180)	3256198
20	21.1	0.0	0.0	chr5	148682606	148682644	(32855615)	+	A-rich	Low_complexity	1	39	(0)	3256278
2992	13.5	13.6	5.0	chr5	151245662	151245853	(30292406)	C	MER51A	LTR/ERV1	(388)	246	2	3261488
12446	8.4	1.6	0.2	chr5	151245854	151247486	(30290773)	C	HERV4_I-int	LTR/ERV1	(0)	6539	4884	3261488
1360	15.3	11.2	2.6	chr5	154239332	154239640	(27298619)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3266726
7774	22.3	6.7	5.2	chr5	159127839	159128710	(22409549)	C	L1M4a1	LINE/L1	(1702)	877	8	3275593
3851	9.2	0.9	3.0	chr5	163339654	163340222	(18198037)	+	HERVH-int	LTR/ERV1	7157	7713	(0)	3282371
2076	11.1	19.6	0.3	chr5	163340223	163340585	(18197674)	+	LTR7	LTR/ERV1	1	450	(0)	3282371
821	13.7	0.8	6.4	chr5	170151678	170151816	(11386443)	+	MER20	DNA/hAT-Charlie	1	131	(88)	3293066
288	28.8	9.9	0.8	chr5	173855457	173855575	(7682684)	+	MLT1L	LTR/ERVL-MaLR	158	288	(322)	3300445
373	25.2	11.2	8.8	chr5	173855636	173855831	(7682428)	+	MLT1L	LTR/ERVL-MaLR	301	600	(10)	3300445
1198	23.5	0.7	1.2	chr5	176754215	176754613	(4783646)	+	L1ME1	LINE/L1	5136	5534	(645)	3305924
1243	22.4	8.6	7.1	chr5	176754609	176755103	(4783156)	+	L1ME1	LINE/L1	5675	6177	(2)	3305924
671	1.3	0.0	0.0	chr5	181207755	181207830	(330429)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	3313853
2402	17.8	6.6	8.2	chr5	181208006	181208641	(329618)	C	L1MB3	LINE/L1	(4)	6179	5555	3313854
246	22.4	1.5	0.0	chr6	658350	658416	(170147563)	C	L1MD	LINE/L1	(1489)	4657	4590	3315066
519	30.1	6.5	0.6	chr6	658417	658590	(170147389)	+	L2a	LINE/L2	3242	3426	(0)	3315067
239	34.7	1.2	2.9	chr6	1789984	1790158	(169015821)	C	Plat_L3	LINE/CR1	(698)	2888	2717	3316579
1150	15.9	14.1	0.4	chr6	2842280	2842512	(167963467)	C	MLT1A1	LTR/ERVL-MaLR	(138)	270	1	3317992
2317	12.3	2.1	7.1	chr6	2979556	2979829	(167826150)	+	MER4D1	LTR/ERV1	635	898	(2)	3318193
4258	12.6	0.2	5.1	chr6	2979919	2980585	(167825394)	+	MER41B	LTR/ERV1	1	634	(0)	3318195
314	34.1	0.0	7.9	chr6	2990481	2990620	(167815359)	+	L2b	LINE/L2	3244	3372	(3)	3318213
3903	10.6	2.7	0.5	chr6	2990658	2991209	(167814770)	+	LTR6A	LTR/ERV1	1	564	(0)	3318214
3783	17.8	3.0	1.2	chr6	3117494	3118217	(167687762)	C	L1MB3	LINE/L1	(5)	6178	5442	3318429
1000	24.8	5.3	0.0	chr6	3162251	3162484	(167643495)	+	MIR	SINE/MIR	15	261	(1)	3318494
2427	16.1	4.6	10.0	chr6	3337812	3338330	(167467649)	+	MER34A	LTR/ERV1	1	495	(76)	3318755
2052	9.7	6.1	0.0	chr6	3338331	3338609	(167467370)	C	AluSg	SINE/Alu	(13)	297	1	3318756
2427	16.1	4.6	10.0	chr6	3338610	3338691	(167467288)	+	MER34A	LTR/ERV1	496	568	(3)	3318755
1598	28.5	14.5	1.7	chr6	3392439	3393299	(167412680)	C	L2a	LINE/L2	(581)	2838	1849	3318822
644	24.7	5.5	1.0	chr6	3393339	3393530	(167412449)	C	MER3	DNA/hAT-Charlie	(8)	201	1	3318824
285	27.4	0.0	10.6	chr6	3407768	3407955	(167398024)	C	L4_A_Mam	LINE/RTE-X	(7)	4983	4816	3318843
460	33.6	6.3	3.9	chr6	4911231	4911540	(165894439)	C	L4_A_Mam	LINE/RTE-X	(128)	4862	4545	3321207
20	3.9	3.7	0.0	chr6	7110477	7110503	(163695476)	+	(GT)n	Simple_repeat	1	28	(0)	3324627
18	13.2	3.0	0.0	chr6	7199621	7199653	(163606326)	+	(TG)n	Simple_repeat	1	34	(0)	3324755
1124	13.8	0.0	0.0	chr6	7199658	7199842	(163606137)	C	AluJr	SINE/Alu	(0)	312	122	3324756
2349	7.2	0.3	0.3	chr6	10886422	10886713	(159919266)	C	AluSz	SINE/Alu	(20)	292	1	3330389
3062	11.5	0.4	3.2	chr6	13674481	13674973	(157131006)	+	LTR3B_	LTR/ERVK	21	499	(0)	3334668
3861	16.6	7.2	4.0	chr6	13674974	13676011	(157129968)	+	L1MCa	LINE/L1	2861	3934	(2630)	3334666
791	23.3	5.2	0.3	chr6	13923249	13923580	(156882399)	C	L1ME4b	LINE/L1	(247)	677	321	3335167
989	23.1	10.9	0.0	chr6	14710777	14711211	(156094768)	C	LTR50	LTR/ERVL	(3)	792	214	3336431
456	23.5	12.3	0.0	chr6	14711232	14711367	(156094612)	C	LTR50	LTR/ERVL	(639)	156	2	3336431
4371	10.3	2.4	3.4	chr6	15019436	15019520	(155786459)	+	MER41B	LTR/ERV1	1	100	(534)	3337019
2241	7.9	1.8	0.0	chr6	15019521	15019797	(155786182)	C	AluSq2	SINE/Alu	(2)	311	30	3337020
17	12.7	0.0	0.0	chr6	15107037	15107062	(155698917)	+	(TC)n	Simple_repeat	1	26	(0)	3337250
1937	17.9	16.6	2.4	chr6	15894898	15895405	(154910574)	+	LTR49	LTR/ERV1	1	595	(0)	3338636
781	21.8	9.3	3.0	chr6	15895408	15895639	(154910340)	C	MIR	SINE/MIR	(10)	252	5	3338637
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
1215	29.3	8.2	2.1	chr6	16005496	16006053	(154799926)	C	MLT1L	LTR/ERVL-MaLR	(5)	605	11	3338838
758	22.1	3.6	8.1	chr6	16028528	16028991	(154776988)	+	L1ME3B	LINE/L1	5813	6135	(38)	3338871
2444	19.0	3.0	4.1	chr6	16031415	16031909	(154774070)	+	MER61E	LTR/ERV1	85	531	(38)	3338877
2280	13.5	7.4	0.3	chr6	16044129	16044507	(154761472)	C	LTR47A	LTR/ERVL	(42)	410	3	3338899
19	4.5	0.0	0.0	chr6	16131030	16131052	(154674927)	+	(A)n	Simple_repeat	1	23	(0)	3339046
2133	13.9	0.7	0.0	chr6	16214180	16214489	(154591490)	C	AluSx1	SINE/Alu	(0)	312	1	3339168
1060	16.1	0.5	11.1	chr6	16214490	16214666	(154591313)	C	LTR8	LTR/ERV1	(522)	169	1	3339167
452	27.8	12.2	2.4	chr6	16214672	16214832	(154591147)	+	Charlie2b	DNA/hAT-Charlie	2457	2647	(135)	3339169
3387	14.0	11.9	1.6	chr6	16265461	16266134	(154539845)	+	LTR12	LTR/ERV1	1	753	(73)	3339250
2040	7.9	7.3	3.1	chr6	16266521	16266810	(154539169)	+	AluYk3	SINE/Alu	1	303	(8)	3339251
1627	13.1	0.6	11.3	chr6	16266811	16267081	(154538898)	+	LTR12_	LTR/ERV1	363	609	(79)	3339252
2237	7.0	3.7	1.9	chr6	16267380	16267699	(154538280)	+	LTR12_	LTR/ERV1	363	688	(0)	3339254
197	32.4	11.0	2.8	chr6	17907681	17907788	(152898191)	C	L2a	LINE/L2	(332)	3094	2977	3342044
16	8.7	4.0	0.0	chr6	17962733	17962757	(152843222)	+	(CT)n	Simple_repeat	1	26	(0)	3342142
4268	9.2	1.6	0.0	chr6	20188405	20188960	(150617019)	C	MER61E	LTR/ERV1	(4)	565	1	3345560
2331	14.2	7.1	0.7	chr6	24311884	24312317	(146493662)	+	LTR7C	LTR/ERV1	1	464	(7)	3351687
4361	10.9	1.6	0.5	chr6	24756192	24756815	(146049164)	C	MER41B	LTR/ERV1	(0)	634	4	3352489
242	36.2	5.0	9.2	chr6	24756816	24756900	(146049079)	C	L3	LINE/CR1	(1506)	2593	2522	3352486
26	0.0	0.0	0.0	chr6	24756901	24756925	(146049054)	+	(T)n	Simple_repeat	1	25	(0)	3352490
235	25.3	2.6	0.0	chr6	25535300	25535374	(145270605)	+	Plat_L3	LINE/CR1	3198	3274	(312)	3353771
1499	23.8	9.0	6.9	chr6	26029259	26029778	(144776201)	C	MER34	LTR/ERV1	(0)	542	11	3354515
1521	11.7	8.2	9.3	chr6	26053941	26054077	(144751902)	C	Tigger7	DNA/TcMar-Tigger	(209)	2282	2137	3354557
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
2411	5.8	0.3	0.3	chr6	26172204	26172497	(144633482)	+	AluSc8	SINE/Alu	1	294	(17)	3354760
496	27.1	10.6	8.0	chr6	26190592	26190823	(144615156)	+	Charlie4a	DNA/hAT-Charlie	5	247	(261)	3354801
2419	8.7	0.0	0.3	chr6	26190824	26191132	(144614847)	+	AluY	SINE/Alu	2	309	(2)	3354802
2009	12.2	0.7	1.6	chr6	26198329	26198631	(144607348)	C	AluSg	SINE/Alu	(10)	300	1	3354813
730	22.1	9.5	6.8	chr6	26205551	26205846	(144600133)	+	LOR1b	LTR/ERV1	3	307	(154)	3354820
2406	8.7	0.0	0.0	chr6	26208138	26208437	(144597542)	C	AluSc8	SINE/Alu	(11)	300	1	3354826
1330	28.5	3.9	10.5	chr6	26208438	26209012	(144596967)	C	L2a	LINE/L2	(608)	2811	2252	3354824
1398	17.1	12.2	1.9	chr6	26213544	26213865	(144592114)	+	MLT1B	LTR/ERVL-MaLR	24	383	(7)	3354835
2150	8.1	0.0	1.4	chr6	26215158	26215474	(144590505)	C	AluSc8	SINE/Alu	(0)	311	2	3354840
951	23.8	2.9	1.2	chr6	26215623	26215862	(144590117)	C	AluJr	SINE/Alu	(47)	265	22	3354841
1477	15.7	7.1	0.0	chr6	26215900	26216148	(144589831)	C	AluSq2	SINE/Alu	(22)	291	24	3354842
35	20.0	1.6	6.4	chr6	26520821	26520943	(144285036)	+	(CCCCTC)n	Simple_repeat	1	125	(0)	3355396
679	0.0	0.0	0.0	chr6	26532917	26532990	(144272989)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3355416
511	4.0	0.0	17.8	chr6	26577104	26577193	(144228786)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	3355507
514	2.7	0.0	18.0	chr6	26594874	26594962	(144211017)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3355542
2713	5.4	0.0	0.0	chr6	27134616	27134912	(143671067)	C	AluY	SINE/Alu	(14)	297	1	3356345
4115	12.1	6.3	0.3	chr6	27135841	27136436	(143669543)	C	MER41B	LTR/ERV1	(0)	634	1	3356348
229	32.4	8.5	0.0	chr6	27136437	27136507	(143669472)	C	L2	LINE/L2	(800)	2619	2543	3356347
384	22.6	6.2	0.9	chr6	27141901	27142007	(143663972)	+	Charlie5	DNA/hAT-Charlie	14	126	(2498)	3356357
905	23.6	12.0	0.6	chr6	27142006	27142270	(143663709)	+	Charlie5	DNA/hAT-Charlie	2234	2531	(93)	3356358
1685	13.8	1.2	2.0	chr6	27144795	27145047	(143660932)	C	AluSz	SINE/Alu	(12)	300	50	3356365
50	0.0	0.0	0.0	chr6	27145296	27145338	(143660641)	+	(AC)n	Simple_repeat	1	43	(0)	3356366
678	4.8	0.0	0.0	chr6	27230555	27230637	(143575342)	C	tRNA-Leu-TTA	tRNA	(3)	83	1	3356540
754	2.4	0.0	0.0	chr6	27553413	27553494	(143252485)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3357102
2117	11.6	0.7	0.0	chr6	27684096	27684397	(143121582)	C	AluSx1	SINE/Alu	(8)	304	1	3357368
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
3642	7.6	0.2	0.4	chr6	27773907	27774370	(143031609)	+	LTR2	LTR/ERV1	1	463	(0)	3357570
8465	3.2	0.0	0.1	chr6	27774460	27775428	(143030551)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3357571
912	9.7	0.8	1.5	chr6	27797007	27797140	(143008839)	+	FLAM_C	SINE/Alu	1	133	(10)	3357611
4297	8.0	1.7	12.1	chr6	27797141	27797746	(143008233)	+	MER4A	LTR/ERV1	120	664	(0)	3357609
2019	13.5	0.0	0.0	chr6	27806651	27806938	(142999041)	C	AluJb	SINE/Alu	(20)	292	5	3357633
1747	11.2	0.0	0.4	chr6	27812495	27812736	(142993243)	+	AluSx3	SINE/Alu	68	308	(3)	3357637
2135	13.2	1.0	0.0	chr6	27812871	27813174	(142992805)	+	AluJr	SINE/Alu	1	307	(5)	3357638
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
626	1.4	0.0	0.0	chr6	27902908	27902978	(142903001)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	3357803
4976	14.1	3.2	2.2	chr6	28220221	28221124	(142584855)	C	MER49	LTR/ERV1	(8)	915	3	3358273
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
13	9.7	9.1	0.0	chr6	28336875	28336907	(142469072)	+	(GTTGTT)n	Simple_repeat	1	36	(0)	3358464
7905	6.3	0.8	0.4	chr6	28491047	28492049	(142313930)	+	LTR13	LTR/ERVK	1	1007	(0)	3358718
288	32.7	5.5	7.4	chr6	28563671	28564023	(142241956)	+	MLT1L	LTR/ERVL-MaLR	121	466	(144)	3358834
629	4.0	0.0	0.0	chr6	28726018	28726091	(142079888)	+	tRNA-Thr-ACY_	tRNA	1	74	(3)	3359101
582	6.9	0.0	0.0	chr6	28795964	28796035	(142009944)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359235
2564	4.0	1.0	0.3	chr6	28895821	28896121	(141909858)	C	AluY	SINE/Alu	(6)	305	3	3359410
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
2294	8.8	1.0	0.3	chr6	28924297	28924601	(141881378)	+	AluSc	SINE/Alu	1	307	(2)	3359466
624	0.0	0.0	0.0	chr6	28982199	28982270	(141823709)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	3359575
18	20.3	0.0	0.0	chr6	30614692	30614726	(140191253)	+	(AC)n	Simple_repeat	1	35	(0)	3361894
2434	8.5	0.0	1.9	chr6	30717993	30718311	(140087668)	C	AluSp	SINE/Alu	(0)	313	1	3362079
282	21.4	6.7	4.5	chr6	30726051	30726138	(140079841)	+	MER5A	DNA/hAT-Charlie	18	107	(82)	3362089
364	30.6	10.2	2.7	chr6	30781620	30781846	(140024133)	C	MIRc	SINE/MIR	(15)	253	1	3362216
2066	7.9	7.4	0.4	chr6	31542686	31542962	(139263017)	C	AluSx1	SINE/Alu	(14)	298	1	3363472
260	35.8	14.3	0.5	chr6	31725783	31726203	(139079776)	+	L2c	LINE/L2	2327	2815	(604)	3363787
249	28.8	5.5	13.6	chr6	31726300	31726520	(139079459)	+	L2c	LINE/L2	2961	3165	(222)	3363787
242	25.9	13.5	9.8	chr6	31739151	31739254	(139066725)	+	L2c	LINE/L2	3289	3426	(0)	3363799
283	20.6	0.0	2.9	chr6	31739518	31739587	(139066392)	C	MIR	SINE/MIR	(6)	256	189	3363801
18	11.3	2.5	2.4	chr6	31807224	31807263	(138998716)	+	A-rich	Low_complexity	1	41	(0)	3363933
2228	11.0	0.3	0.0	chr6	31807302	31807602	(138998377)	+	AluSx1	SINE/Alu	1	302	(10)	3363934
1638	6.5	0.0	5.6	chr6	31814127	31814357	(138991622)	+	AluY	SINE/Alu	1	218	(93)	3363946
652	17.6	3.7	5.1	chr6	31834263	31834400	(138971579)	C	AluJb	SINE/Alu	(176)	136	1	3363975
14	10.4	3.0	2.9	chr6	31834405	31834437	(138971542)	+	(TTTTG)n	Simple_repeat	1	34	(0)	3363980
18	4.1	0.0	6.9	chr6	31834547	31834575	(138971404)	+	(GC)n	Simple_repeat	1	29	(0)	3363981
1850	12.1	4.4	2.1	chr6	31841975	31842263	(138963716)	C	AluSp	SINE/Alu	(17)	296	1	3364000
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
230	33.6	12.5	2.0	chr6	31973218	31973509	(138832470)	C	L2	LINE/L2	(824)	2595	2269	3364259
275	24.6	12.3	2.6	chr6	32857536	32857652	(137948327)	+	MIRc	SINE/MIR	124	253	(15)	3365501
356	30.6	10.5	5.3	chr6	33299810	33300131	(137505848)	C	L2b	LINE/L2	(7)	3380	3080	3366146
272	33.0	13.7	3.1	chr6	33390848	33391075	(137414904)	+	MIRb	SINE/MIR	4	259	(9)	3366376
820	27.3	10.5	3.2	chr6	33570669	33571073	(137234906)	+	Charlie13a	DNA/hAT-Charlie	447	884	(630)	3366760
267	27.8	6.1	0.9	chr6	34661645	34661753	(136144226)	+	MLT1O	LTR/ERVL-MaLR	406	520	(22)	3368849
1433	22.7	10.7	0.5	chr6	34663806	34664226	(136141753)	+	MLT1D	LTR/ERVL-MaLR	37	505	(0)	3368857
863	16.5	0.0	0.0	chr6	34664348	34664468	(136141511)	C	FLAM_A	SINE/Alu	(20)	122	2	3368858
947	13.1	1.4	0.0	chr6	34668678	34668814	(136137165)	C	AluJr	SINE/Alu	(14)	298	160	3368866
8454	3.4	0.0	0.1	chr6	34719460	34720428	(136085551)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3369011
12	9.9	2.6	7.7	chr6	36025602	36025639	(134780340)	+	(TCCCTCA)n	Simple_repeat	1	39	(0)	3371670
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
14	12.8	5.9	0.0	chr6	36441895	36441928	(134364051)	+	(TTCCAA)n	Simple_repeat	1	36	(0)	3372526
20	15.3	0.0	2.6	chr6	36442045	36442082	(134363897)	+	(TA)n	Simple_repeat	1	38	(0)	3372527
1758	9.4	0.0	2.1	chr6	36442096	36442328	(134363651)	C	AluSx1	SINE/Alu	(84)	228	1	3372528
1847	14.0	5.5	1.4	chr6	36615024	36615316	(134190663)	+	AluJo	SINE/Alu	1	306	(6)	3372917
235	28.9	14.9	1.0	chr6	36848590	36848687	(133957292)	C	L3b	LINE/CR1	(239)	4993	4880	3373432
597	27.6	8.1	6.3	chr6	36862417	36862821	(133943158)	+	MLT1L	LTR/ERVL-MaLR	124	610	(0)	3373456
2000	14.8	1.3	1.3	chr6	37049599	37049901	(133756078)	C	AluJb	SINE/Alu	(9)	303	1	3373816
892	24.9	3.3	1.7	chr6	37109550	37109790	(133696189)	C	MIR	SINE/MIR	(2)	260	16	3373969
910	26.6	1.2	2.5	chr6	37109844	37110107	(133695872)	+	MIRc	SINE/MIR	7	268	(0)	3373970
2130	10.5	1.7	0.3	chr6	37176280	37176574	(133629405)	C	AluSz	SINE/Alu	(13)	299	1	3374143
1053	13.6	0.0	1.9	chr6	37176667	37176821	(133629158)	+	AluJr4	SINE/Alu	115	266	(46)	3374144
38	0.0	0.0	0.0	chr6	37176837	37176869	(133629110)	+	(AC)n	Simple_repeat	1	33	(0)	3374145
870	23.0	10.2	1.8	chr6	37176905	37177239	(133628740)	C	Charlie7	DNA/hAT-Charlie	(2076)	536	63	3374146
716	16.3	1.6	2.3	chr6	37182813	37182941	(133623038)	C	FLAM_A	SINE/Alu	(14)	128	1	3374168
378	26.9	1.4	9.6	chr6	37182951	37183106	(133622873)	C	MIR	SINE/MIR	(109)	159	17	3374165
328	30.4	9.4	4.6	chr6	41938759	41938910	(128867069)	+	MIR3	SINE/MIR	38	197	(11)	3382129
274	29.2	0.9	12.4	chr6	41958446	41958574	(128847405)	C	L2c	LINE/L2	(0)	3387	3274	3382179
316	27.3	0.0	0.0	chr6	41958742	41958818	(128847161)	+	MER94	DNA/hAT-Blackjack	35	111	(23)	3382180
247	30.3	11.0	6.8	chr6	42017426	42017659	(128788320)	+	L2c	LINE/L2	3076	3320	(67)	3382348
1151	23.3	17.9	7.2	chr6	42199452	42199870	(128606109)	+	MLT1G3	LTR/ERVL-MaLR	79	577	(2)	3382776
854	20.4	2.1	0.0	chr6	43118116	43118254	(127687725)	+	MER3	DNA/hAT-Charlie	20	161	(48)	3384732
2356	9.3	0.3	0.0	chr6	43118255	43118555	(127687424)	+	AluSx1	SINE/Alu	1	302	(10)	3384733
739	19.3	1.3	6.6	chr6	43608527	43608692	(127197287)	C	AluJo	SINE/Alu	(19)	293	137	3385676
2905	22.4	4.1	0.8	chr6	49644151	49644885	(121161094)	C	L1MB7	LINE/L1	(110)	6074	5315	3394720
232	33.0	6.9	9.8	chr6	49646617	49646841	(121159138)	C	MIRb	SINE/MIR	(27)	241	24	3394724
804	27.3	4.1	6.9	chr6	49827134	49827511	(120978468)	+	L1MDa	LINE/L1	34	400	(6233)	3394943
2240	23.5	6.4	3.6	chr6	49827570	49828369	(120977610)	+	L1MDa	LINE/L1	1710	2533	(4100)	3394943
1189	31.5	7.4	1.3	chr6	50962297	50963046	(119842933)	C	L2a	LINE/L2	(8)	3418	2610	3396392
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
1116	28.9	5.6	3.8	chr6	67878926	67879080	(102926899)	C	L1MEc	LINE/L1	(2366)	3953	3801	3416011
1241	24.0	4.4	5.1	chr6	67879083	67879506	(102926473)	+	MER39	LTR/ERV1	1	603	(104)	3416014
2649	2.5	0.3	0.0	chr6	67879508	67879824	(102926155)	C	L1PA2	LINE/L1	(1119)	5027	4710	3416015
7791	1.8	0.0	0.0	chr6	67879824	67880939	(102925040)	+	L1PA2	LINE/L1	5032	6147	(8)	3416015
1477	24.3	8.7	1.0	chr6	67889062	67889473	(102916506)	C	LTR7C	LTR/ERV1	(0)	471	25	3416018
13	16.6	0.0	0.0	chr6	68041631	68041657	(102764322)	+	(CAA)n	Simple_repeat	1	27	(0)	3416208
187	30.0	0.0	2.0	chr6	72560727	72560777	(98245202)	+	MER5B	DNA/hAT-Charlie	129	178	(0)	3422031
217	35.7	10.9	6.3	chr6	72560871	72560926	(98245053)	+	L2c	LINE/L2	1917	1973	(1446)	3422032
3531	14.9	1.9	0.3	chr6	72560927	72561512	(98244467)	+	MER41E	LTR/ERV1	1	595	(0)	3422033
244	22.2	16.3	0.0	chr6	73417987	73418094	(97387885)	+	L1MC	LINE/L1	3118	3246	(2900)	3423372
1232	10.8	2.9	0.0	chr6	73418147	73418313	(97387666)	+	AluSc8	SINE/Alu	2	173	(138)	3423373
271	15.4	10.3	0.0	chr6	73418316	73418393	(97387586)	+	L1MEg	LINE/L1	1155	1241	(4843)	3423374
239	29.3	6.0	4.3	chr6	79604391	79604521	(91201458)	+	MIRb	SINE/MIR	131	267	(1)	3431488
910	25.4	3.0	3.0	chr6	79604663	79604930	(91201049)	+	MLT1G1-int	LTR/ERVL-MaLR	1140	1407	(2)	3431489
1716	25.0	10.1	8.6	chr6	83974325	83975082	(86830897)	C	LTR19C	LTR/ERV1	(2)	777	7	3437229
472	22.8	4.6	1.4	chr6	84035457	84035603	(86770376)	+	MER112	DNA/hAT-Charlie	7	158	(103)	3437338
2336	19.8	5.6	0.8	chr6	109304290	109304783	(61501196)	C	LTR53	LTR/ERVL	(0)	519	1	3471962
356	24.4	5.8	10.0	chr6	109304784	109304861	(61501118)	C	MamGypLTR2c	LTR/Gypsy	(220)	848	777	3471961
357	39.9	8.1	2.5	chr6	110819381	110819655	(59986324)	C	L2	LINE/L2	(723)	2696	2409	3474371
3230	16.0	3.5	2.6	chr6	110819659	110820224	(59985755)	+	MER41B	LTR/ERV1	1	571	(63)	3474373
216	36.6	10.0	1.9	chr6	111804819	111804974	(59001005)	+	MIR3	SINE/MIR	16	185	(23)	3476215
1001	18.5	3.7	0.9	chr6	136251842	136252054	(34553925)	C	HAL1M8	LINE/L1	(2215)	776	558	3509586
1231	16.6	8.0	0.4	chr6	137170726	137170967	(33635012)	C	LTR47A	LTR/ERVL	(190)	262	1	3511072
347	33.6	4.4	0.0	chr6	137171147	137171277	(33634702)	C	L2a	LINE/L2	(7)	3419	3283	3511074
35768	11.5	3.2	2.0	chr6	137371174	137376212	(33429767)	C	MER57A-int	LTR/ERV1	(0)	6187	1089	3511377
325	25.2	5.5	5.5	chr6	139445802	139445910	(31360069)	C	MIR3	SINE/MIR	(5)	203	95	3514687
416	37.0	14.5	1.3	chr6	139569970	139570434	(31235545)	+	L3	LINE/CR1	3454	3990	(109)	3514904
3312	11.5	0.2	0.0	chr6	143064809	143065278	(27740701)	C	LTR7C	LTR/ERV1	(0)	471	1	3519342
320	21.1	0.0	1.4	chr6	144544922	144544993	(26260986)	C	L1M5	LINE/L1	(281)	5842	5772	3521569
1055	29.9	15.4	2.4	chr6	144545059	144545737	(26260242)	+	L2a	LINE/L2	2529	3317	(109)	3521564
218	28.8	1.5	0.0	chr6	144886951	144887016	(25918963)	+	MIR	SINE/MIR	195	261	(1)	3522016
6917	16.8	5.9	0.0	chr6	145787342	145788474	(25017505)	+	ERVL-int	LTR/ERVL	4482	5757	(0)	3523187
194	27.9	4.2	8.1	chr6	146548901	146548974	(24257005)	+	L3b	LINE/CR1	5117	5187	(45)	3524179
14	14.9	5.1	2.4	chr6	146549081	146549119	(24256860)	+	(CTT)n	Simple_repeat	1	41	(0)	3524180
191	23.6	9.8	1.8	chr6	146884905	146884960	(23921019)	C	MIR3	SINE/MIR	(87)	121	61	3524634
302	32.9	0.4	4.2	chr6	146886813	146886923	(23919056)	C	MIRc	SINE/MIR	(114)	154	41	3524636
4557	10.5	0.9	0.9	chr6	146887061	146887694	(23918285)	C	MER41B	LTR/ERV1	(0)	634	1	3524637
532	32.4	4.9	4.6	chr6	147201568	147201829	(23604150)	C	MIRb	SINE/MIR	(3)	265	3	3525088
187	19.4	0.0	0.0	chr6	147201993	147202028	(23603951)	+	MER5A	DNA/hAT-Charlie	136	171	(18)	3525089
221	29.3	9.7	2.9	chr6	147209769	147209940	(23596039)	C	L2b	LINE/L2	(270)	3117	2933	3525096
373	27.6	11.6	4.6	chr6	147227292	147227530	(23578449)	C	HAL1	LINE/L1	(22)	2485	2228	3525122
557	25.1	15.1	0.9	chr6	149728652	149728969	(21077010)	+	L2a	LINE/L2	2881	3245	(181)	3529035
1167	19.4	4.1	0.3	chr6	152490031	152490326	(18315653)	+	MER2	DNA/TcMar-Tigger	26	344	(1)	3533599
1858	17.4	14.4	0.7	chr6	152490339	152490744	(18315235)	+	LTR7C	LTR/ERV1	1	471	(0)	3533600
258	35.1	8.3	2.9	chr6	157326729	157326966	(13479013)	+	Tigger16b	DNA/TcMar-Tigger	80	331	(5)	3540723
4506	6.2	0.5	0.2	chr6	157754759	157755310	(13050669)	C	MER41A	LTR/ERV1	(0)	554	1	3541411
3386	22.9	7.8	2.2	chr6	157809120	157810465	(12995514)	+	L1ME1	LINE/L1	4737	6168	(11)	3541510
565	21.6	5.6	0.7	chr6	158004004	158004138	(12801841)	+	LTR87	LTR/ERVL?	480	621	(3)	3541802
4781	9.6	1.6	0.2	chr6	158004149	158004773	(12801206)	+	MER41B	LTR/ERV1	1	634	(0)	3541803
504	31.8	8.1	9.5	chr6	158826107	158826449	(11979530)	+	L2b	LINE/L2	2918	3256	(119)	3543183
708	23.5	4.3	0.6	chr6	163777362	163777541	(7028438)	+	MER58A	DNA/hAT-Charlie	34	220	(4)	3549910
4256	11.2	2.5	0.3	chr6	164337813	164338432	(6467547)	+	MER41B	LTR/ERV1	1	634	(0)	3550658
3264	18.1	2.5	2.5	chr6	164404832	164405442	(6400537)	+	MER73	LTR/ERVL	1	611	(33)	3550728
928	26.2	4.9	4.2	chr6	164405483	164405959	(6400020)	C	L1M4b	LINE/L1	(5423)	1770	1202	3550721
4315	14.0	2.4	2.3	chr6	167099884	167100591	(3705388)	C	LTR62	LTR/ERVL	(0)	709	1	3554031
2026	17.4	6.0	6.4	chr6	167100661	167101114	(3704865)	C	LTR47A	LTR/ERVL	(0)	452	1	3554032
5503	17.9	4.5	1.9	chr7	2022586	2023666	(157322307)	+	L1MCa	LINE/L1	2173	3294	(3027)	3560721
1052	6.6	0.0	3.6	chr7	2960886	2961022	(156384951)	+	AluYb8	SINE/Alu	1	132	(186)	3562365
2156	12.7	0.0	0.0	chr7	2961027	2961325	(156384648)	+	AluY	SINE/Alu	2	300	(11)	3562366
1017	16.4	0.0	1.3	chr7	5525180	5525338	(153820635)	C	AluJr	SINE/Alu	(19)	293	137	3567248
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
27	22.1	0.0	0.0	chr7	5525625	5525687	(153820286)	+	(ATGA)n	Simple_repeat	1	63	(0)	3567251
1578	18.3	1.2	0.4	chr7	5575278	5575534	(153770439)	C	AluJb	SINE/Alu	(0)	312	54	3567383
4301	6.5	1.3	1.1	chr7	6988359	6988915	(152357058)	C	LTR6B	LTR/ERV1	(0)	558	1	3570501
229	34.4	2.1	1.3	chr7	8233001	8233142	(151112831)	C	MIR1_Amn	SINE/MIR	(27)	181	37	3572235
3118	14.8	3.2	11.4	chr7	10972817	10973509	(148372464)	+	MER51A	LTR/ERV1	1	634	(0)	3575590
700	31.9	7.2	5.6	chr7	20219895	20220355	(139125618)	+	MLT1N2	LTR/ERVL-MaLR	93	561	(1)	3587458
2219	17.5	9.4	5.1	chr7	22913142	22913443	(136432530)	+	L1M4b	LINE/L1	920	1211	(5656)	3591447
1704	14.4	19.6	0.8	chr7	22913465	22913829	(136432144)	+	LTR7	LTR/ERV1	1	450	(0)	3591449
1249	16.8	2.3	0.5	chr7	26233830	26234044	(133111929)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3596658
3982	7.2	6.3	0.0	chr7	29794679	29795195	(129550778)	C	MER41A	LTR/ERV1	(2)	552	1	3602132
1918	10.7	19.1	5.2	chr7	30479569	30479952	(128866021)	+	LTR7	LTR/ERV1	1	450	(0)	3603187
2695	10.6	4.8	1.2	chr7	30484498	30484918	(128861055)	+	HERVH-int	LTR/ERV1	7277	7713	(0)	3603187
2087	10.8	19.0	0.3	chr7	30484921	30485283	(128860690)	+	LTR7	LTR/ERV1	4	450	(0)	3603187
262	33.9	5.1	0.0	chr7	36216360	36216489	(123129484)	+	L1ME4c	LINE/L1	135	271	(559)	3611922
2562	17.9	2.4	5.2	chr7	39721751	39721955	(119624018)	+	L1MB8	LINE/L1	4185	4375	(1771)	3617013
4195	10.2	1.1	5.5	chr7	39721956	39722595	(119623378)	C	LTR9	LTR/ERV1	(0)	612	1	3617014
7213	15.0	5.0	3.3	chr7	46769170	46769232	(112576741)	+	HUERS-P1-int	LTR/ERV1	627	682	(5581)	3627650
2403	15.5	6.8	1.4	chr7	46769233	46769677	(112576296)	+	LTR7C	LTR/ERV1	1	471	(0)	3627652
2409	21.1	5.1	6.6	chr7	65927464	65928083	(93417890)	C	LTR71B	LTR/ERV1	(0)	610	1	3648807
3635	10.1	5.7	2.8	chr7	72710928	72711473	(86634500)	+	LTR19B	LTR/ERV1	1	566	(14)	3662913
2063	14.7	1.0	0.3	chr7	73885809	73886115	(85459858)	+	AluJr	SINE/Alu	1	309	(3)	3665709
806	19.4	2.2	5.3	chr7	73886116	73886239	(85459734)	C	MER5A	DNA/hAT-Charlie	(56)	133	6	3665708
194	22.7	0.0	4.3	chr7	73886247	73886292	(85459681)	+	UCON132b	DNA/hAT-Tip100	103	146	(2)	3665710
1097	18.8	0.5	0.0	chr7	74279824	74280025	(85065948)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	3666661
12965	7.0	0.3	0.9	chr7	77873227	77874356	(81471617)	C	HERVL-int	LTR/ERVL	(4523)	1131	1	3674629
4079	13.7	0.8	0.2	chr7	84821526	84822155	(74523818)	C	MER41B	LTR/ERV1	(0)	634	1	3684024
2928	17.7	0.2	6.0	chr7	84822156	84822504	(74523469)	+	L1MC3	LINE/L1	7370	7701	(84)	3684022
1029	26.0	14.0	3.7	chr7	87060728	87061409	(72284564)	C	L1ME4a	LINE/L1	(7)	6117	5354	3686722
375	23.4	1.8	6.7	chr7	87140319	87140437	(72205536)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	399	3686846
4477	9.3	1.4	0.2	chr7	87330749	87331310	(72014663)	C	MER61E	LTR/ERV1	(0)	569	1	3687051
598	25.3	1.6	2.6	chr7	87416641	87416840	(71929133)	+	MIR	SINE/MIR	70	265	(3)	3687159
1673	25.2	7.0	4.2	chr7	88689978	88690875	(70655098)	+	L1MEc	LINE/L1	1485	2418	(3982)	3688859
18141	9.4	0.2	0.4	chr7	99833671	99836055	(59509918)	C	HERV15-int	LTR/ERV1	(5)	8730	6349	3705357
308	28.2	6.5	8.6	chr7	103996121	103996341	(55349632)	+	L1MEd	LINE/L1	90	305	(6781)	3713474
682	23.6	5.8	1.0	chr7	103996353	103996549	(55349424)	+	MER5C1	DNA/hAT-Charlie	2	208	(55)	3713475
267	18.7	5.2	3.2	chr7	104995584	104995677	(54350296)	+	L1MA4A	LINE/L1	5999	6094	(209)	3714976
766	13.0	0.0	3.9	chr7	104995778	104995905	(54350068)	+	MER1B	DNA/hAT-Charlie	217	339	(0)	3714977
1975	16.5	6.6	2.4	chr7	106466987	106467408	(52878565)	+	LTR56	LTR/ERV1	1	441	(4)	3717614
2303	19.0	4.8	3.1	chr7	106502076	106502585	(52843388)	+	LTR53	LTR/ERVL	1	519	(0)	3717663
2756	7.5	15.7	0.7	chr7	106569510	106569937	(52776036)	+	LTR10F	LTR/ERV1	1	504	(7)	3717761
4320	10.9	4.0	3.0	chr7	106767153	106767852	(52578121)	C	LTR62	LTR/ERVL	(2)	707	1	3718033
296	34.9	11.4	2.7	chr7	106767859	106767985	(52577988)	C	MIRc	SINE/MIR	(20)	248	97	3718034
1528	14.5	0.4	0.0	chr7	106774310	106774544	(52571429)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	1	3718048
4321	9.3	1.3	2.8	chr7	106774627	106775270	(52570703)	C	MER41B	LTR/ERV1	(0)	634	1	3718049
4031	9.6	2.5	0.2	chr7	106796527	106796945	(52549028)	C	MER41A	LTR/ERV1	(130)	424	1	3718093
13041	9.0	2.6	0.9	chr7	106796946	106798625	(52547348)	C	MER41-int	LTR/ERV1	(2)	5944	4225	3718093
2884	13.9	1.1	3.3	chr7	106829151	106829634	(52516339)	+	MER50	LTR/ERV1	133	605	(129)	3718145
2902	11.4	6.8	0.0	chr7	106829635	106830073	(52515900)	+	LTR7C	LTR/ERV1	1	471	(0)	3718146
17538	12.7	0.5	0.1	chr7	106835466	106838081	(52507892)	+	HERVH-int	LTR/ERV1	5086	7713	(0)	3718146
2946	11.2	6.8	0.0	chr7	106838082	106838519	(52507454)	+	LTR7C	LTR/ERV1	1	470	(1)	3718146
212	20.4	5.4	5.4	chr7	106980083	106980175	(52365798)	C	UCON132b	DNA/hAT-Tip100	(43)	105	13	3718374
9419	17.2	3.8	0.9	chr7	107109836	107111624	(52234349)	+	L1M1	LINE/L1	10	1852	(5713)	3718610
224	35.3	11.4	3.1	chr7	111438610	111438770	(47907203)	+	LFSINE_Vert	SINE/tRNA	24	199	(260)	3724321
248	34.1	7.9	0.0	chr7	111438900	111438981	(47906992)	C	L2c	LINE/L2	(8)	3379	3291	3724322
3392	25.2	8.8	5.1	chr7	111477416	111477616	(47868357)	C	L1MEg	LINE/L1	(4655)	1429	1222	3724375
2239	11.9	0.3	0.0	chr7	111477617	111477909	(47868064)	+	AluSp	SINE/Alu	1	294	(19)	3724376
12	24.4	2.6	0.0	chr7	112450737	112450775	(46895198)	+	(GGC)n	Simple_repeat	1	40	(0)	3725834
217	37.1	1.1	1.1	chr7	116439008	116439097	(42906876)	C	L2b	LINE/L2	(18)	3357	3268	3731045
1618	11.4	2.2	1.1	chr7	116446207	116446473	(42899500)	+	L1MB2	LINE/L1	5898	6167	(4)	3731055
2594	17.9	3.1	1.4	chr7	116876678	116877187	(42468786)	C	LTR53	LTR/ERVL	(0)	519	1	3731689
4279	19.8	2.2	1.4	chr7	121038602	121039507	(38306466)	C	L1MC3	LINE/L1	(172)	7613	6701	3737147
227	30.9	4.2	0.0	chr7	121081843	121081910	(38264063)	C	MIRb	SINE/MIR	(15)	253	183	3737207
502	26.7	11.5	2.0	chr7	127896404	127896552	(31449421)	+	MER5A1	DNA/hAT-Charlie	2	166	(0)	3746375
541	32.5	3.6	5.9	chr7	128099949	128100129	(31245844)	+	MIR	SINE/MIR	13	185	(77)	3746601
336	24.6	9.2	3.3	chr7	129055449	129055570	(30290403)	C	L2c	LINE/L2	(41)	3346	3217	3748377
204	35.8	3.4	9.5	chr7	129752304	129752556	(29593417)	C	L2c	LINE/L2	(362)	3057	2821	3749781
2434	12.0	5.6	2.1	chr7	131587863	131588296	(27757677)	C	LTR7	LTR/ERV1	(0)	450	1	3753084
253	33.3	6.5	2.2	chr7	135508746	135508923	(23837050)	C	Tigger19a	DNA/TcMar-Tigger	(66)	257	72	3759069
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
2311	10.6	0.0	1.0	chr7	135981852	135982152	(23363821)	+	AluSx3	SINE/Alu	1	298	(13)	3759925
412	36.2	8.6	5.7	chr7	135982153	135982168	(23363805)	+	MLT1I-int	LTR/ERVL-MaLR	893	908	(479)	3759923
2900	10.5	4.1	1.8	chr7	135982177	135982630	(23363343)	C	MER4C	LTR/ERV1	(0)	465	1	3759926
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
565	27.5	16.7	1.6	chr7	138352588	138352874	(20993099)	+	MLT1G	LTR/ERVL-MaLR	1	287	(304)	3763419
247	25.0	2.9	3.9	chr7	138352906	138353009	(20992964)	+	MLT1G	LTR/ERVL-MaLR	366	468	(101)	3763419
2001	18.6	4.1	1.2	chr7	138353043	138353483	(20992490)	C	MER67B	LTR/ERV1	(216)	445	41	3763420
1847	21.7	4.7	6.6	chr7	138461977	138462338	(20883635)	+	LTR40a	LTR/ERVL	4	365	(154)	3763678
2872	0.3	0.0	0.0	chr7	138462339	138462639	(20883334)	C	AluY	SINE/Alu	(10)	301	1	3763679
4871	2.9	0.0	0.2	chr7	139091867	139092425	(20253548)	C	LTR6B	LTR/ERV1	(0)	558	1	3764901
1603	17.7	1.1	2.8	chr7	139111661	139111942	(20234031)	+	AluJr	SINE/Alu	1	277	(35)	3764948
128	13.8	5.2	2.0	chr7	139111946	139112231	(20233742)	+	A-rich	Low_complexity	1	301	(0)	3764949
1009	24.6	7.9	4.0	chr7	139112301	139112651	(20233322)	C	ERV3-16A3_LTR	LTR/ERVL	(8)	414	49	3764950
2343	8.8	0.3	0.0	chr7	139339886	139340182	(20005791)	C	AluSp	SINE/Alu	(15)	298	1	3765382
3594	21.0	5.1	1.8	chr7	139908384	139909253	(19436720)	C	L1MDa	LINE/L1	(4149)	2484	1585	3766395
306	24.2	18.9	0.0	chr7	139909299	139909397	(19436576)	+	Charlie4z	DNA/hAT-Charlie	25	146	(21)	3766397
1872	16.3	0.0	2.3	chr7	139914030	139914336	(19431637)	C	AluJr	SINE/Alu	(12)	300	1	3766406
181	30.0	4.8	3.6	chr7	139914483	139914565	(19431408)	+	MIRb	SINE/MIR	149	232	(36)	3766407
247	33.6	4.1	9.2	chr7	139914570	139914929	(19431044)	+	L2c	LINE/L2	3046	3386	(1)	3766408
13	16.9	0.0	8.5	chr7	139940979	139941025	(19404948)	+	(ATACAC)n	Simple_repeat	1	47	(0)	3766446
3036	11.1	1.8	0.7	chr7	140391619	140392061	(18953912)	+	MER83	LTR/ERV1	1	448	(0)	3767324
989	13.3	4.8	0.0	chr7	140392062	140392219	(18953754)	+	MER83A-int	LTR/ERV1	12	177	(4108)	3767324
675	29.3	4.6	1.4	chr7	140479687	140479936	(18866037)	+	MIRb	SINE/MIR	1	261	(7)	3767542
1849	16.9	9.6	7.3	chr7	140507910	140508374	(18837599)	+	MER34A	LTR/ERV1	3	479	(92)	3767638
2023	13.6	0.7	0.7	chr7	140508379	140508688	(18837285)	+	AluSz	SINE/Alu	1	310	(2)	3767639
2611	9.3	11.4	0.8	chr7	141584043	141584442	(17761531)	C	LTR7	LTR/ERV1	(2)	448	1	3769520
1252	11.5	0.0	0.5	chr7	141584445	141584636	(17761337)	+	MER4A	LTR/ERV1	474	664	(0)	3769521
3494	15.9	4.2	6.9	chr7	143262710	143263273	(16082700)	C	LTR8A	LTR/ERV1	(153)	574	1	3771648
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
13	19.0	8.3	0.0	chr7	149027905	149027952	(10318021)	+	(CCCTCT)n	Simple_repeat	1	52	(0)	3779849
1213	12.6	4.7	0.0	chr7	150307057	150307239	(9038734)	C	MER4E1	LTR/ERV1	(13)	768	577	3781852
3239	11.2	1.5	0.0	chr7	150307240	150307703	(9038270)	+	LTR7C	LTR/ERV1	1	471	(0)	3781853
254	26.0	8.3	0.0	chr7	150312680	150312756	(9033217)	+	HERVH-int	LTR/ERV1	7568	7651	(62)	3781853
3759	7.5	0.2	0.0	chr7	150312817	150313286	(9032687)	+	LTR7C	LTR/ERV1	1	471	(0)	3781854
4381	10.9	3.0	0.7	chr7	150322212	150322830	(9023143)	+	MER41B	LTR/ERV1	1	634	(0)	3781881
184	19.4	0.0	0.0	chr7	150421349	150421384	(8924589)	+	L2a	LINE/L2	3391	3426	(0)	3782041
6554	9.3	4.1	2.9	chr7	151027014	151027969	(8318004)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3782808
434	35.0	8.6	1.9	chr7	151084008	151084214	(8261759)	+	MIRb	SINE/MIR	18	239	(29)	3782874
2080	15.6	4.2	2.4	chr7	152026289	152026961	(7319012)	+	MER4A	LTR/ERV1	1	740	(26)	3784464
844	22.3	11.7	0.0	chr7	152674851	152675047	(6670926)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	3785717
1055	27.0	7.1	8.2	chr7	153407735	153407952	(5938021)	C	L1MEc	LINE/L1	(3417)	2902	2713	3786888
40	2.6	0.0	0.0	chr7	153407953	153407991	(5937982)	+	(TG)n	Simple_repeat	1	39	(0)	3786889
1312	25.3	6.6	3.4	chr7	153407992	153408695	(5937278)	C	L1MEc	LINE/L1	(3607)	2712	1977	3786888
762	26.9	7.2	0.5	chr7	154672776	154672984	(4672989)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	3788596
774	16.5	0.0	0.0	chr7	156660516	156660636	(2685337)	C	FLAM_A	SINE/Alu	(10)	132	12	3791192
226	14.9	9.6	0.0	chr7	156660647	156660693	(2685280)	C	Charlie9	DNA/hAT-Charlie	(0)	2757	2706	3791193
1617	23.4	3.0	5.3	chr7	156660699	156661322	(2684651)	C	MER4D	LTR/ERV1	(0)	903	23	3791194
2363	16.3	16.7	3.9	chr8	2733496	2734158	(142404478)	C	LTR60B	LTR/ERV1	(0)	765	1	3797229
1993	14.7	10.3	5.3	chr8	8777650	8777687	(136360949)	+	MSTA	LTR/ERVL-MaLR	395	427	(1)	3805320
4032	14.0	6.4	0.3	chr8	8777730	8778091	(136360545)	+	LTR62	LTR/ERVL	8	402	(307)	3805322
970	25.1	0.8	2.3	chr8	18122672	18122936	(127015700)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	124	3819211
1010	18.8	0.0	0.0	chr8	18122940	18123099	(127015537)	C	AluJb	SINE/Alu	(17)	295	136	3819212
1239	30.2	9.7	1.1	chr8	22681705	22682172	(122456464)	+	L2a	LINE/L2	2913	3425	(1)	3826634
14	10.6	13.2	1.7	chr8	23494338	23494390	(121644246)	+	(CAGCTGG)n	Simple_repeat	1	60	(0)	3828018
234	27.3	0.0	13.5	chr8	23506953	23507041	(121631595)	C	Tigger15a	DNA/TcMar-Tigger	(589)	126	50	3828046
613	37.2	1.2	1.2	chr8	29318910	29319404	(115819232)	+	HERVK22-int	LTR/ERVK	6023	6517	(320)	3837715
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
280	28.9	1.1	7.2	chr8	37673597	37673693	(107464943)	+	L2a	LINE/L2	3335	3425	(1)	3850758
2654	11.1	10.2	0.7	chr8	38003697	38004122	(107134514)	C	LTR7C	LTR/ERV1	(0)	471	1	3851406
985	12.2	0.0	0.0	chr8	38004127	38004257	(107134379)	+	AluSz	SINE/Alu	3	133	(179)	3851407
4110	15.1	2.6	3.5	chr8	38081124	38081815	(107056821)	+	LTR39	LTR/ERV1	24	709	(74)	3851615
3608	12.4	4.2	0.9	chr8	41818754	41819299	(103319337)	+	MER61E	LTR/ERV1	1	565	(4)	3857650
4245	6.1	1.8	3.4	chr8	42266541	42266989	(102871647)	+	MER41A	LTR/ERV1	1	441	(113)	3858477
3971	12.4	2.5	4.8	chr8	43124520	43125207	(102013429)	C	LTR76	LTR/ERV1	(3)	672	1	3860158
3161	17.1	4.8	14.1	chr8	48466545	48467329	(96671307)	+	LTR62	LTR/ERVL	1	708	(1)	3863348
3654	11.8	2.5	3.0	chr8	49110428	49110995	(96027641)	+	MER61E	LTR/ERV1	1	565	(4)	3864039
17	17.8	1.9	5.7	chr8	58492541	58492592	(86646044)	+	A-rich	Low_complexity	1	53	(0)	3876664
1498	22.1	1.9	8.2	chr8	67366063	67366342	(77772294)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	113	3889129
4914	8.4	0.2	1.9	chr8	67366343	67366533	(77772103)	+	MER41B	LTR/ERV1	1	190	(444)	3889130
1592	25.9	11.0	5.9	chr8	89755031	89755809	(55382827)	C	HAL1	LINE/L1	(448)	2059	1236	3920206
2304	13.7	7.7	0.9	chr8	89755839	89756273	(55382363)	+	LTR7C	LTR/ERV1	1	467	(4)	3920207
546	37.6	6.8	1.0	chr8	93501860	93502259	(51636377)	+	L2c	LINE/L2	1912	2336	(1083)	3925304
1987	11.1	7.4	2.2	chr8	93878357	93878720	(51259916)	C	LTR7	LTR/ERV1	(2)	448	1	3925984
259	29.2	3.3	0.0	chr8	93878722	93878810	(51259826)	+	MIRb	SINE/MIR	160	251	(17)	3925985
409	23.1	4.4	1.8	chr8	95226660	95226769	(49911867)	+	LTR85b	LTR/Gypsy?	65	177	(607)	3928440
13	0.0	5.0	0.0	chr8	97762557	97762576	(47376060)	+	(TGTT)n	Simple_repeat	1	21	(0)	3932378
197	30.1	0.8	13.4	chr8	97762621	97762638	(47375998)	+	L2c	LINE/L2	3264	3281	(106)	3932379
4178	11.7	0.3	8.7	chr8	97762639	97763208	(47375428)	+	MER41B	LTR/ERV1	1	515	(119)	3932380
2226	12.4	12.9	0.9	chr8	100501529	100501976	(44636660)	C	LTR54	LTR/ERV1	(0)	510	1	3936907
966	17.6	2.6	11.1	chr8	101042481	101042862	(44095774)	+	LTR37A	LTR/ERV1	76	464	(4)	3938039
604	27.6	3.2	5.7	chr8	107331542	107331733	(37806903)	+	MIRb	SINE/MIR	53	239	(29)	3947818
2467	14.4	7.4	0.2	chr8	115709936	115710372	(29428264)	+	LTR7C	LTR/ERV1	1	471	(0)	3959018
292	29.7	5.6	1.0	chr8	123179034	123179135	(21959501)	+	MIR3	SINE/MIR	72	178	(30)	3971330
1893	15.7	10.1	1.7	chr8	123179160	123179521	(21959115)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3971331
4680	7.2	0.2	0.0	chr8	124450022	124450574	(20688062)	C	MER41A	LTR/ERV1	(0)	554	1	3973736
1107	20.7	8.4	3.8	chr8	124525909	124526339	(20612297)	+	LTR56	LTR/ERV1	13	635	(0)	3973867
482	25.2	7.4	2.6	chr8	124720818	124720972	(20417664)	C	MIRb	SINE/MIR	(10)	258	96	3974193
321	25.9	9.7	0.0	chr8	124721012	124721123	(20417513)	+	MamRep1879	DNA/hAT-Tip100?	9	132	(84)	3974194
331	29.9	0.8	7.9	chr8	124843433	124843559	(20295077)	+	MIR1_Amn	SINE/MIR	33	150	(80)	3974469
2225	11.2	0.0	0.0	chr8	124887215	124887509	(20251127)	C	AluSx1	SINE/Alu	(17)	295	1	3974562
4002	28.6	8.2	7.8	chr8	124887510	124887556	(20251080)	C	ERV3-16A3_I-int	LTR/ERVL	(3714)	1512	1483	3974560
504	23.1	2.7	0.0	chr8	124887557	124887664	(20250972)	+	MER81	DNA/hAT-Blackjack	1	111	(3)	3974563
4002	29.1	8.6	7.1	chr8	124887665	124889001	(20249635)	C	ERV3-16A3_I-int	LTR/ERVL	(3744)	1482	83	3974560
418	32.0	4.4	1.9	chr8	127741885	127742040	(17396596)	C	MIRb	SINE/MIR	(53)	215	56	3979963
530	28.8	8.6	2.5	chr8	127742153	127742348	(17396288)	C	MIR	SINE/MIR	(19)	243	35	3979964
184	28.7	0.9	10.7	chr8	127898905	127899025	(17239611)	C	LFSINE_Vert	SINE/tRNA	(280)	179	71	3980357
368	26.7	1.0	1.0	chr8	129557005	129557106	(15581530)	+	LTR33C	LTR/ERVL	30	131	(498)	3983362
539	28.8	10.2	0.0	chr8	129557131	129557394	(15581242)	+	LTR33C	LTR/ERVL	336	629	(0)	3983362
1072	8.4	0.0	0.0	chr8	144061158	144061311	(1077325)	+	MER41A	LTR/ERV1	1	154	(400)	4007036
1672	7.8	0.9	0.5	chr8	144061319	144061535	(1077101)	+	AluSx	SINE/Alu	85	302	(10)	4007037
220	37.0	9.4	0.7	chr9	20376629	20376764	(118017953)	C	L3b	LINE/CR1	(281)	4951	4803	4037799
2323	8.2	0.3	0.0	chr9	34150971	34151261	(104243456)	C	AluY	SINE/Alu	(3)	308	17	4056842
368	22.2	7.9	4.1	chr9	36398089	36398210	(101996507)	C	L2c	LINE/L2	(14)	3373	3247	4060557
271	25.8	13.2	3.2	chr9	37593336	37593491	(100801226)	+	L1MC5a	LINE/L1	2603	2776	(1)	4062997
2320	10.4	0.0	0.7	chr9	37593508	37593816	(100800901)	C	AluSx	SINE/Alu	(5)	307	1	4062998
6262	12.8	1.2	1.9	chr9	64478771	64479744	(73914973)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	4075366
4217	11.5	2.7	0.2	chr9	77893076	77893693	(60501024)	+	MER41B	LTR/ERV1	1	634	(0)	4094938
979	10.9	13.7	3.6	chr9	85884643	85884943	(52509774)	C	LTR7	LTR/ERV1	(0)	450	1	4106910
3742	16.4	3.6	2.0	chr9	85884946	85885035	(52509682)	C	L1MC3	LINE/L1	(132)	7653	7565	4106912
833	10.4	0.0	0.0	chr9	86145992	86146097	(52248620)	+	AluSg7	SINE/Alu	1	106	(203)	4107405
2245	15.4	11.9	0.7	chr9	86146098	86146515	(52248202)	+	LTR7C	LTR/ERV1	1	471	(0)	4107406
272	31.2	13.3	1.7	chr9	86285521	86285693	(52109024)	C	MIRc	SINE/MIR	(25)	243	48	4107652
2283	8.8	18.7	0.5	chr9	88514137	88514504	(49880213)	C	LTR7	LTR/ERV1	(0)	450	1	4111322
671	27.0	13.9	1.9	chr9	91764643	91765124	(46629593)	C	L1MEi	LINE/L1	(5342)	1761	1157	4115712
745	13.7	0.8	2.3	chr9	94165547	94165677	(44229040)	+	AluJb	SINE/Alu	176	304	(8)	4119124
244	21.3	1.3	0.5	chr9	94165714	94165828	(44228889)	C	MIR	SINE/MIR	(98)	170	57	4119125
1329	19.0	4.5	6.1	chr9	96683365	96683723	(41710994)	C	MER65B	LTR/ERV1	(178)	353	1	4123321
432	28.7	7.3	0.0	chr9	97924882	97925045	(40469672)	+	MIRc	SINE/MIR	88	264	(4)	4125415
1245	17.3	3.8	1.2	chr9	97925595	97925851	(40468866)	+	L1MD3	LINE/L1	7730	7993	(2)	4125418
356	24.2	0.0	4.2	chr9	97925908	97926002	(40468715)	+	MER5B	DNA/hAT-Charlie	88	178	(0)	4125419
201	29.1	4.7	6.1	chr9	97926013	97926128	(40468589)	+	L2c	LINE/L2	3277	3421	(5)	4125420
2105	9.5	0.3	7.0	chr9	97960587	97960913	(40433804)	C	AluSz	SINE/Alu	(7)	305	1	4125486
427	22.2	15.6	1.2	chr9	97981689	97981852	(40412865)	+	MIRb	SINE/MIR	28	219	(43)	4125542
18	4.0	0.0	0.0	chr9	97981890	97981915	(40412802)	+	(TTTTG)n	Simple_repeat	1	26	(0)	4125543
3430	14.2	0.6	0.2	chr9	98049370	98049871	(40344846)	C	MER41B	LTR/ERV1	(130)	504	1	4125682
2450	16.1	0.7	0.0	chr9	98049875	98050272	(40344445)	C	MER57B1	LTR/ERV1	(0)	401	1	4125683
8118	7.4	4.7	2.7	chr9	98050273	98050781	(40343936)	C	MER57-int	LTR/ERV1	(0)	7537	7007	4125683
606	26.2	5.1	1.4	chr9	98182591	98182784	(40211933)	+	MIRb	SINE/MIR	10	217	(51)	4126005
392	18.7	14.1	1.7	chr9	98182797	98182948	(40211769)	+	MER104	DNA/TcMar-Tc2	1	179	(2)	4126006
3874	13.8	4.3	1.3	chr9	98851583	98852197	(39542520)	C	MER41B	LTR/ERV1	(0)	634	1	4127345
484	28.4	1.3	0.6	chr9	98852198	98852237	(39542480)	+	MIRb	SINE/MIR	226	264	(4)	4127344
246	32.3	0.0	0.0	chr9	99075006	99075067	(39319650)	+	MIR	SINE/MIR	46	107	(155)	4127794
279	26.7	13.2	1.5	chr9	99075107	99075239	(39319478)	+	MIR	SINE/MIR	108	258	(4)	4127794
1489	11.7	1.8	0.0	chr9	100033780	100033993	(38360724)	+	MER41-int	LTR/ERV1	5729	5946	(0)	4129454
1186	20.2	2.5	0.8	chr9	100033994	100034022	(38360695)	+	HERVK14-int	LTR/ERVK	5894	5926	(170)	4129455
3606	10.4	3.5	2.2	chr9	100034023	100034561	(38360156)	+	MER41B	LTR/ERV1	1	546	(88)	4129454
188	24.6	11.5	1.4	chr9	101398283	101398352	(36996365)	C	MIRb	SINE/MIR	(113)	155	78	4131635
3029	17.9	1.0	0.2	chr9	101840667	101841181	(36553536)	C	LTR53	LTR/ERVL	(0)	519	1	4132282
412	30.7	11.0	1.3	chr9	105296880	105297058	(33097659)	C	MIR3	SINE/MIR	(10)	198	6	4137311
1571	21.2	4.7	1.4	chr9	105435287	105435702	(32959015)	C	LTR7C	LTR/ERV1	(17)	454	25	4137553
342	21.6	3.4	0.0	chr9	108094355	108094465	(30300252)	C	MIRb	SINE/MIR	(91)	177	64	4142184
2449	27.1	10.4	5.0	chr9	112422260	112423337	(25971380)	+	L1MEj	LINE/L1	518	1668	(492)	4149808
1158	18.4	9.0	2.3	chr9	113345533	113345962	(25048755)	C	LTR54	LTR/ERV1	(5)	505	4	4151469
2242	13.5	0.0	2.2	chr9	113346016	113346334	(25048383)	C	AluSx	SINE/Alu	(0)	312	1	4151470
4193	11.2	2.8	3.0	chr9	114557588	114557916	(23836801)	C	MER41B	LTR/ERV1	(290)	344	1	4153921
1994	19.3	4.4	6.4	chr9	114557917	114558081	(23836636)	C	Tigger9b	DNA/TcMar-Tigger	(315)	309	149	4153918
222	27.0	6.3	7.5	chr9	116465108	116465187	(21929530)	C	MIRb	SINE/MIR	(188)	80	2	4157442
12	20.8	0.0	2.9	chr9	116465597	116465631	(21929086)	+	(AAT)n	Simple_repeat	1	35	(0)	4157443
242	14.6	0.0	0.0	chr9	116466830	116466870	(21927847)	+	MIRc	SINE/MIR	119	159	(109)	4157446
332	26.8	12.4	0.8	chr9	116558792	116558919	(21835798)	+	MIR	SINE/MIR	112	256	(6)	4157609
513	26.0	3.0	0.8	chr9	116558921	116559052	(21835665)	C	L2a	LINE/L2	(2)	3424	3290	4157610
440	38.1	4.5	0.8	chr9	120826940	120827177	(17567540)	C	MIRc	SINE/MIR	(20)	248	2	4165787
767	27.6	6.1	0.0	chr9	120827201	120827494	(17567223)	C	L1MC5a	LINE/L1	(13)	2764	2452	4165788
826	22.4	7.9	2.8	chr9	126859224	126859439	(11535278)	+	MIRb	SINE/MIR	41	268	(0)	4177199
1435	15.7	7.4	5.5	chr9	128159643	128159935	(10234782)	+	AluJb	SINE/Alu	1	299	(13)	4179863
499	34.2	1.1	2.1	chr9	129863365	129863555	(8531162)	C	MIRb	SINE/MIR	(19)	249	61	4183807
6283	15.0	1.3	0.8	chr9	133283398	133284394	(5110323)	+	LTR5B	LTR/ERVK	1	1002	(0)	4190352
4211	10.3	0.0	0.0	chrX	3701577	3702130	(152338765)	+	MER41A	LTR/ERV1	1	554	(0)	4365397
791	28.9	6.4	3.3	chrX	16771508	16771808	(139269087)	+	AluJb	SINE/Alu	2	312	(0)	4386663
2479	21.8	4.7	3.0	chrX	41010229	41010837	(115030058)	+	LTR33C	LTR/ERVL	1	620	(9)	4423485
1968	17.0	1.9	0.0	chrX	49244549	49244854	(106796041)	C	AluJr	SINE/Alu	(0)	312	1	4437774
403	27.0	1.0	0.0	chrX	63434863	63434962	(92605933)	C	LTR46	LTR/ERV1	(359)	101	1	4450156
280	29.4	5.0	0.6	chrX	63434965	63435135	(92605760)	+	L1ME3C	LINE/L1	5838	6016	(107)	4450157
356	28.7	4.6	0.5	chrX	63435136	63435324	(92605571)	+	L1ME3Cz	LINE/L1	794	990	(7)	4450158
788	19.4	7.0	7.0	chrX	103098300	103098543	(52942352)	C	LTR23-int	LTR/ERV1	(3927)	2260	2017	4498052
3110	18.2	3.7	12.3	chrX	103098747	103099552	(52941343)	C	MER50	LTR/ERV1	(0)	734	1	4498056
4126	9.9	5.8	1.3	chrX	110000728	110001332	(46039563)	C	MER41B	LTR/ERV1	(0)	634	1	4507751
3725	11.2	1.8	1.8	chrX	114071435	114071999	(41968896)	+	MER61E	LTR/ERV1	1	565	(4)	4513636
3008	11.4	6.8	0.0	chrX	153094556	153094994	(2945901)	C	LTR7C	LTR/ERV1	(0)	471	1	4569839
6260	11.7	1.3	0.5	chrX	153094995	153095469	(2945426)	C	HERVH-int	LTR/ERV1	(0)	7713	7240	4569839
3097	10.5	6.8	0.0	chrX	153101038	153101476	(2939419)	C	LTR7C	LTR/ERV1	(0)	471	1	4569839
3475	26.4	3.6	3.2	chrX	153101477	153102442	(2938453)	C	MSTD-int	LTR/ERVL-MaLR	(147)	1588	619	4569838