760	28.4	17.8	4.0	chr1	3968661	3969080	(244987342)	C	LTR16E2	LTR/ERVL	(25)	543	33	4646
841	36.7	6.2	4.7	chr1	3969312	3969956	(244986466)	C	ERVL-E-int	LTR/ERVL	(4872)	795	151	4647
4124	11.5	1.8	0.5	chr1	9077842	9078453	(239877969)	C	MER41B	LTR/ERV1	(14)	620	1	12902
339	33.5	6.1	2.3	chr1	21455539	21455804	(227500618)	+	L1ME1	LINE/L1	182	458	(5942)	37955
1419	31.6	9.2	4.0	chr1	25584096	25584889	(223371533)	C	LTR78B	LTR/ERV1	(457)	839	1	47437
207	25.0	2.2	0.0	chr1	31548847	31548890	(217407532)	C	MIR3	SINE/MIR	(117)	91	47	60883
496	23.2	22.3	4.1	chr1	31549245	31549608	(217406814)	C	L2a	LINE/L2	(1)	3425	2977	60884
243	36.4	5.5	2.5	chr1	32072401	32072558	(216883864)	C	L2	LINE/L2	(706)	2713	2551	61998
2061	15.7	0.0	0.3	chr1	36328489	36328787	(212627635)	+	AluJb	SINE/Alu	1	298	(14)	70656
403	28.7	13.9	1.8	chr1	36328806	36329025	(212627397)	C	MIRb	SINE/MIR	(0)	268	18	70657
356	22.6	7.7	4.9	chr1	36329053	36329215	(212627207)	C	MER20B	DNA/hAT-Charlie	(6)	777	610	70658
809	13.6	0.8	0.8	chr1	40025961	40026085	(208930337)	+	AluJr4	SINE/Alu	178	302	(10)	77959
1424	20.8	11.1	2.0	chr1	40026094	40026446	(208929976)	C	LTR16B1	LTR/ERVL	(67)	413	25	77960
489	29.0	3.3	1.4	chr1	40026481	40026627	(208929795)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	5077	77960
799	16.3	5.6	0.7	chr1	40026669	40026803	(208929619)	+	AluJr4	SINE/Alu	1	142	(170)	77961
229	25.2	8.3	4.3	chr1	41763086	41763201	(207193221)	+	MIR1_Amn	SINE/MIR	90	210	(20)	81396
972	26.9	4.8	7.3	chr1	54423584	54423817	(194532605)	+	LTR16	LTR/ERVL	1	225	(213)	105039
3035	8.6	2.7	1.1	chr1	55952797	55953233	(193003189)	+	MLT2A1	LTR/ERVL	1	444	(0)	107933
931	35.8	5.5	2.6	chr1	55953446	55953992	(193002430)	+	LTR16E2	LTR/ERVL	1	564	(4)	107934
1007	31.3	2.7	3.8	chr1	58368098	58368542	(190587880)	+	ERV3-16A3_I-int	LTR/ERVL	4685	5124	(102)	112720
382	31.6	9.7	0.0	chr1	58368671	58368828	(190587594)	+	LTR16C	LTR/ERVL	1	175	(314)	112721
1319	13.2	7.3	0.0	chr1	58368832	58369021	(190587401)	+	AluJb	SINE/Alu	87	291	(21)	112722
78	6.6	3.6	0.0	chr1	61588982	61589093	(187367329)	+	(TC)n	Simple_repeat	1	116	(0)	118399
1036	27.2	4.2	6.8	chr1	64534344	64534475	(184421947)	+	MamRep4096	DNA/hAT-Tip100	287	405	(21)	124059
274	32.6	8.0	1.4	chr1	64534587	64534726	(184421696)	+	L2b	LINE/L2	3205	3354	(21)	124062
336	27.2	5.0	7.7	chr1	64534871	64535037	(184421385)	+	MIRb	SINE/MIR	30	182	(80)	124063
1318	27.5	4.1	1.9	chr1	67935539	67935596	(181020826)	C	LTR16C	LTR/ERVL	(0)	489	434	129842
2199	17.2	14.2	0.2	chr1	67935597	67936069	(181020353)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	129843
439	36.5	5.4	1.7	chr1	73965158	73965511	(174990911)	C	L2a	LINE/L2	(1483)	1936	1569	138038
10863	9.6	3.2	0.9	chr1	73965525	73967126	(174989296)	C	L1PA8	LINE/L1	(1304)	4842	3202	138040
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
9436	7.7	11.4	2.2	chr1	80052604	80054032	(168902390)	C	LTR12C	LTR/ERV1	(0)	1579	3	146673
324	20.3	0.0	7.8	chr1	80054033	80054080	(168902342)	+	HERVL18-int	LTR/ERVL	5224	5267	(780)	146672
250	17.8	0.0	0.0	chr1	80054081	80054125	(168902297)	+	HERVL18-int	LTR/ERVL	5946	5990	(57)	146672
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
5081	12.5	20.9	1.6	chr1	85714229	85715222	(163241200)	C	MER11B	LTR/ERVK	(0)	1236	1	154628
11368	10.9	2.0	0.1	chr1	93262206	93263806	(155692616)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	166007
13298	16.9	7.1	5.1	chr1	93374061	93377098	(155579324)	+	L1MA3	LINE/L1	17	2929	(4636)	166201
954	25.1	20.9	2.4	chr1	100927123	100927538	(148028884)	C	L2a	LINE/L2	(1037)	2382	1870	177227
1702	29.8	11.8	3.7	chr1	100927539	100928430	(148027992)	C	L2a	LINE/L2	(2032)	1387	414	177227
4085	13.0	1.4	0.2	chr1	102655170	102655795	(146300627)	+	MER41B	LTR/ERV1	1	634	(0)	179591
1745	33.9	6.3	5.2	chr1	102655796	102656249	(146300173)	C	L2a	LINE/L2	(2833)	586	139	179589
422	37.2	10.1	1.1	chr1	105235346	105235785	(143720637)	C	ERVL-E-int	LTR/ERVL	(4927)	740	257	182606
758	37.2	4.4	4.1	chr1	112102008	112102573	(136853849)	+	LTR16E2	LTR/ERVL	1	568	(0)	192582
2111	13.3	0.0	1.3	chr1	112967159	112967466	(135988956)	C	AluSx	SINE/Alu	(8)	304	1	194161
2016	13.0	0.7	0.0	chr1	112994795	112995078	(135961344)	C	AluSx1	SINE/Alu	(26)	286	1	194227
2301	11.6	0.3	0.0	chr1	112995147	112995448	(135960974)	C	AluSp	SINE/Alu	(9)	304	2	194228
1409	28.7	7.0	2.9	chr1	113769943	113770502	(135185920)	+	MLT1L	LTR/ERVL-MaLR	16	600	(10)	195482
940	20.8	17.4	10.4	chr1	143720101	143720503	(105235919)	C	LTR4	LTR/ERV1	(111)	485	49	208223
608	22.2	0.0	2.3	chr1	143720514	143720642	(105235780)	C	U1	snRNA	(37)	128	3	208224
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1642	16.7	0.0	0.4	chr1	148275129	148275392	(100681030)	+	AluSx	SINE/Alu	49	311	(1)	215408
8010	12.5	3.2	1.4	chr1	148325419	148326950	(100629472)	+	LOR1-int	LTR/ERV1	4213	6064	(2056)	215491
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
15	17.4	2.9	0.0	chr1	150321483	150321516	(98634906)	+	(GCG)n	Simple_repeat	1	35	(0)	218779
1970	14.8	0.0	1.7	chr1	151525115	151525412	(97431010)	+	AluSz	SINE/Alu	1	293	(19)	221406
9085	18.3	1.8	1.3	chr1	152147542	152148949	(96807473)	C	MSTB-int	LTR/ERVL-MaLR	(227)	1424	2	222447
222	31.0	8.3	2.9	chr1	154198789	154198891	(94757531)	C	MIR3	SINE/MIR	(63)	145	37	225656
1465	30.2	7.3	1.4	chr1	156821597	156822160	(92134262)	C	LTR16D1	LTR/ERVL	(74)	601	2	230826
6042	19.7	5.7	6.4	chr1	160736743	160737402	(88219020)	+	L1MDa	LINE/L1	1390	2049	(4584)	236181
975	35.3	4.8	2.9	chr1	163812487	163812935	(85143487)	C	LTR16E1	LTR/ERVL	(80)	458	1	241306
605	32.3	2.4	5.4	chr1	163812936	163813326	(85143096)	C	ERVL-B4-int	LTR/ERVL	(379)	5288	4885	241306
1447	33.0	8.3	0.8	chr1	164370613	164371134	(84585288)	C	LTR16E2	LTR/ERVL	(3)	565	1	241982
1045	34.3	3.0	4.7	chr1	164371248	164371862	(84584560)	C	ERV3-16A3_I-int	LTR/ERVL	(147)	5079	4476	241983
2440	12.0	10.8	0.0	chr1	168154706	168155087	(80801335)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	247904
6646	10.4	2.3	3.5	chr1	168155088	168155391	(80801031)	C	L1MA5A	LINE/L1	(222)	7494	7201	247903
6003	13.2	2.6	1.8	chr1	171722930	171723980	(77232442)	C	MER11C	LTR/ERVK	(5)	1066	7	253222
268	13.2	0.0	0.0	chr1	176949107	176949144	(72007278)	+	MER81	DNA/hAT-Blackjack	35	72	(42)	260944
258	22.4	1.3	12.6	chr1	177186273	177186359	(71770063)	+	MIR3	SINE/MIR	87	163	(45)	261318
691	28.2	1.8	7.2	chr1	178502685	178502921	(70453501)	C	MIRb	SINE/MIR	(22)	246	23	263179
401	29.8	7.1	1.0	chr1	178503181	178503346	(70453076)	+	MIR	SINE/MIR	23	195	(73)	263180
1396	16.2	1.3	0.8	chr1	192875747	192875983	(56080439)	C	7SK	RNA	(91)	240	3	283999
1798	18.9	2.0	6.4	chr1	196535611	196535984	(52420438)	C	LTR18A	LTR/ERVL	(0)	357	1	288783
509	21.6	0.0	0.0	chr1	196535986	196536087	(52420335)	C	HERVL18-int	LTR/ERVL	(0)	6047	5946	288783
285	24.1	1.7	0.0	chr1	196536088	196536145	(52420277)	C	HERVL18-int	LTR/ERVL	(780)	5267	5209	288783
1153	29.8	5.6	1.4	chr1	197632741	197633166	(51323256)	+	ERVL-B4-int	LTR/ERVL	4888	5332	(382)	290156
1868	19.0	3.3	27.6	chr1	197633318	197634343	(51322079)	+	LTR41	LTR/ERVL	1	768	(0)	290157
1806	23.9	12.9	1.8	chr1	200699841	200700316	(48256106)	C	MLT1F1	LTR/ERVL-MaLR	(3)	566	27	294830
2168	12.7	0.0	1.0	chr1	200700317	200700607	(48255815)	C	AluSg	SINE/Alu	(22)	288	1	294831
230	33.1	11.5	7.0	chr1	202173958	202174058	(46782364)	C	L2c	LINE/L2	(184)	3203	3089	297431
310	15.2	11.9	0.0	chr1	204806892	204806950	(44149472)	C	MER63D	DNA/hAT-Blackjack	(994)	67	1	302303
380	27.6	11.9	3.2	chr1	206812809	206813122	(42143300)	+	ERVL-E-int	LTR/ERVL	5323	5667	(0)	305733
1651	24.4	12.8	1.4	chr1	206813129	206813634	(42142788)	+	LTR50	LTR/ERVL	15	586	(209)	305733
216	32.6	17.6	3.0	chr1	213410170	213411069	(35545353)	C	L2b	LINE/L2	(1635)	1784	737	316196
2217	12.3	1.0	0.0	chr1	217249321	217249629	(31706793)	+	AluSp	SINE/Alu	1	312	(1)	321452
668	29.1	17.0	4.7	chr1	217249630	217249725	(31706697)	C	LTR16A2	LTR/ERVL	(412)	83	2	321451
306	34.6	0.9	0.0	chr1	217249915	217250018	(31706404)	C	HERV16-int	LTR/ERVL	(3677)	1319	1215	321453
2494	8.9	0.0	0.0	chr1	225444414	225444717	(23511705)	C	AluSx	SINE/Alu	(5)	307	4	333985
203	23.3	15.1	7.6	chr1	227285799	227285877	(21670545)	+	L2a	LINE/L2	1222	1307	(2112)	337221
3505	19.8	3.3	1.3	chr1	227285888	227286660	(21669762)	C	MSTB-int	LTR/ERVL-MaLR	(862)	789	1	337222
8142	20.8	1.6	0.6	chr1	227633562	227635084	(21321338)	+	L1M1	LINE/L1	283	1821	(5744)	337720
373	23.1	6.3	2.2	chr1	228094693	228094829	(20861593)	C	HAL1	LINE/L1	(812)	1695	1553	338284
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1479	27.8	9.4	2.0	chr1	229720595	229721152	(19235270)	C	Tigger8	DNA/TcMar-Tigger	(56)	611	8	340797
238	16.7	12.2	1.4	chr1	229721339	229721411	(19235011)	+	L1MB3	LINE/L1	3539	3620	(2520)	340798
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2832	21.4	6.3	2.7	chr1	237259917	237260554	(11695868)	+	Tigger6a	DNA/TcMar-Tigger	171	820	(263)	353033
366	32.6	0.0	0.0	chr1	240975916	240976007	(7980415)	+	MLT1H2	LTR/ERVL-MaLR	60	151	(338)	358532
1964	18.5	7.0	0.3	chr1	240976384	240976725	(7979697)	+	MLT2D	LTR/ERVL	1	355	(59)	358533
411	19.6	3.2	0.0	chr1	248831575	248831619	(124803)	+	MER3	DNA/hAT-Charlie	1	48	(161)	370867
2112	25.2	5.8	2.3	chr10	4536772	4537387	(129260035)	C	MER21-int	LTR/ERVL	(61)	4130	3492	376613
196	31.2	10.1	0.0	chr10	4537388	4537467	(129259955)	C	OldhAT1	DNA/hAT-Ac	(54)	2794	2706	376614
985	27.2	4.7	1.7	chr10	9807022	9807313	(123990109)	C	LTR16C	LTR/ERVL	(8)	481	181	384757
952	25.1	4.2	1.1	chr10	9807523	9807842	(123989580)	+	MER2	DNA/TcMar-Tigger	1	344	(1)	384758
434	32.3	7.0	0.5	chr10	17235427	17235625	(116561797)	C	MIRb	SINE/MIR	(30)	238	26	397009
13	17.0	3.0	0.0	chr10	17447571	17447603	(116349819)	+	GA-rich	Low_complexity	1	34	(0)	397397
1965	14.1	5.2	0.4	chr10	17447824	17448100	(116349322)	C	AluSx1	SINE/Alu	(21)	291	1	397398
898	23.8	17.2	8.4	chr10	28003642	28004035	(105793387)	C	LTR16	LTR/ERVL	(1)	437	2	414315
930	29.0	13.6	3.4	chr10	28004037	28004597	(105792825)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	4600	414315
366	34.3	8.7	0.5	chr10	46313723	46313933	(87483489)	C	MIR	SINE/MIR	(25)	237	8	437482
185	26.5	4.6	4.6	chr10	49393697	49393783	(84403639)	C	L3	LINE/CR1	(1930)	2169	2083	441833
828	16.0	0.0	0.8	chr10	69994150	69994274	(63803148)	+	FLAM_A	SINE/Alu	1	124	(18)	472573
16	8.9	0.0	3.9	chr10	69994275	69994293	(63803129)	+	(TA)n	Simple_repeat	1	19	(0)	472574
534	15.3	1.1	0.9	chr10	69994448	69994544	(63802878)	C	MLT1J	LTR/ERVL-MaLR	(338)	174	37	472575
403	21.3	0.0	0.0	chr10	72646710	72646784	(61150638)	C	LTR16B1	LTR/ERVL	(405)	75	1	477731
904	22.8	5.1	2.6	chr10	72646785	72647014	(61150408)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	4991	477731
596	25.5	2.6	6.1	chr10	75645282	75645424	(58151998)	C	MIR	SINE/MIR	(68)	194	52	483398
13	8.5	4.0	0.0	chr10	75645455	75645479	(58151943)	+	(GGTG)n	Simple_repeat	1	26	(0)	483400
1528	24.9	5.7	3.5	chr10	78822312	78822739	(54974683)	C	LTR16	LTR/ERVL	(0)	438	1	488535
5612	27.4	7.1	7.1	chr10	78822740	78825167	(54972255)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	2800	488535
15	20.5	2.5	0.0	chr10	84240949	84240988	(49556434)	+	A-rich	Low_complexity	1	41	(0)	496545
183	23.6	5.2	9.8	chr10	84241021	84241081	(49556341)	C	L2c	LINE/L2	(191)	3184	3127	496540
12	6.6	12.5	0.0	chr10	84241435	84241466	(49555956)	+	(CTCCTGG)n	Simple_repeat	1	36	(0)	496546
2360	5.7	0.3	0.3	chr10	92592356	92592637	(41204785)	+	AluSx	SINE/Alu	1	282	(30)	509469
35	0.0	0.0	0.0	chr10	92592639	92592668	(41204754)	+	(CA)n	Simple_repeat	1	30	(0)	509470
311	27.8	9.5	0.0	chr10	92592773	92592905	(41204517)	C	MIR	SINE/MIR	(20)	242	96	509471
186	29.6	9.0	0.0	chr10	119333292	119333362	(14464060)	C	MIRc	SINE/MIR	(117)	151	74	553713
854	30.1	2.6	0.0	chr10	124210749	124211007	(9586415)	+	ERVL-E-int	LTR/ERVL	2883	3148	(2519)	561523
2654	10.4	1.3	0.0	chr10	124211212	124211597	(9585825)	+	LTR47A2	LTR/ERVL	42	432	(0)	561526
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
258	29.6	6.5	1.2	chr11	2888398	2888558	(132198064)	+	MLT1J2	LTR/ERVL-MaLR	34	203	(245)	576280
3065	20.2	4.0	1.6	chr11	14624403	14625138	(120461484)	+	ERV3-16A3_I-int	LTR/ERVL	4473	5226	(0)	594277
2170	13.1	0.3	0.0	chr11	14625169	14625459	(120461163)	+	AluSq	SINE/Alu	3	294	(19)	594279
431	34.5	7.6	0.4	chr11	20127887	20128117	(114958505)	+	L3	LINE/CR1	3828	4076	(23)	603389
242	25.3	13.0	6.7	chr11	20128118	20128282	(114958340)	+	MIR3	SINE/MIR	1	177	(31)	603390
411	33.3	0.0	0.0	chr11	44685399	44685497	(90401125)	C	MIR	SINE/MIR	(149)	113	15	640603
201	26.8	12.3	1.4	chr11	44685589	44685660	(90400962)	+	MIRc	SINE/MIR	2	82	(186)	640604
286	26.0	12.3	3.9	chr11	44685651	44685754	(90400868)	C	L2b	LINE/L2	(1)	3374	3261	640605
292	17.1	6.8	8.9	chr11	44817599	44817688	(90268934)	C	MLT1H	LTR/ERVL-MaLR	(367)	182	95	640912
208	22.2	10.0	0.0	chr11	44817805	44817867	(90268755)	C	MIR3	SINE/MIR	(53)	155	86	640913
263	35.2	2.7	5.8	chr11	44817873	44818026	(90268596)	C	MIRb	SINE/MIR	(43)	225	77	640914
334	31.0	4.1	0.0	chr11	44820311	44820426	(90266196)	C	MLT1M	LTR/ERVL-MaLR	(443)	229	109	640919
423	28.5	5.6	2.5	chr11	44820478	44820639	(90265983)	+	MIR	SINE/MIR	18	192	(70)	640920
360	25.9	6.7	0.9	chr11	60763286	60763398	(74323224)	+	MIRc	SINE/MIR	2	121	(147)	658813
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
473	25.8	3.0	0.8	chr11	61790097	61790225	(73296397)	C	MIR3	SINE/MIR	(75)	133	2	660841
243	22.4	11.8	1.5	chr11	65095792	65095859	(69990763)	C	MIR	SINE/MIR	(72)	190	115	666852
2306	8.8	0.3	0.0	chr11	68132626	68132930	(66953692)	+	AluSp	SINE/Alu	2	307	(6)	672829
652	20.1	4.0	12.3	chr11	68132937	68133022	(66953600)	+	MER66-int	LTR/ERV1	3902	3987	(2689)	672823
2673	1.0	0.0	0.0	chr11	68133023	68133326	(66953296)	+	AluYa5	SINE/Alu	1	304	(7)	672830
897	23.5	21.7	1.7	chr11	68225502	68225860	(66860762)	C	LTR16A	LTR/ERVL	(0)	451	1	673003
352	25.5	11.2	1.5	chr11	68226053	68226229	(66860393)	+	LTR16C	LTR/ERVL	333	535	(3)	673004
893	32.3	5.0	5.6	chr11	76273780	76274347	(58812275)	C	MLT1K	LTR/ERVL-MaLR	(27)	568	5	687664
545	33.2	5.0	2.9	chr11	76274465	76274740	(58811882)	C	MLT1K-int	LTR/ERVL-MaLR	(118)	1269	988	687664
205	32.9	4.1	4.7	chr11	76836656	76836827	(58249795)	+	L2	LINE/L2	2674	2844	(575)	688767
506	21.1	6.3	0.0	chr11	78690370	78690502	(56396120)	+	L1ME4a	LINE/L1	5978	6119	(5)	692460
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
4199	13.0	1.6	0.5	chr11	100805458	100806084	(34280538)	C	MER41B	LTR/ERV1	(0)	634	1	725540
1918	13.2	0.7	4.5	chr11	107782494	107782804	(27303818)	+	AluSz	SINE/Alu	1	299	(13)	735493
2804	14.8	3.2	1.6	chr11	107782805	107783321	(27303301)	C	MER50	LTR/ERV1	(157)	625	1	735492
3651	11.9	8.1	0.2	chr11	114438321	114438902	(20647720)	+	MER41B	LTR/ERV1	1	632	(2)	746275
467	28.6	8.8	2.9	chr11	115677679	115677885	(19408737)	C	MIR	SINE/MIR	(31)	231	3	748062
354	36.1	0.8	4.7	chr11	115677895	115678022	(19408600)	C	MIRb	SINE/MIR	(133)	135	13	748063
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
2113	11.6	0.3	0.7	chr11	123071152	123071444	(12015178)	+	AluSx	SINE/Alu	1	292	(20)	760755
1821	14.6	0.0	0.4	chr11	123071469	123071735	(12014887)	+	AluSx1	SINE/Alu	29	294	(18)	760756
1123	21.6	28.4	1.6	chr11	124707745	124708319	(10378303)	+	LTR50	LTR/ERVL	3	792	(3)	763449
427	23.1	1.8	4.4	chr11	128849154	128849266	(6237356)	C	MIRc	SINE/MIR	(136)	132	23	769479
2239	5.4	0.0	0.0	chr11	129642653	129642912	(5443710)	+	AluY	SINE/Alu	35	294	(17)	770611
417	30.9	7.8	0.0	chr11	134360661	134360825	(725797)	C	HAL1	LINE/L1	(0)	2507	2329	777129
17	17.9	2.7	7.9	chr12	1594790	1594863	(131680446)	+	(GCGCCC)n	Simple_repeat	1	76	(0)	780921
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
676	29.3	8.0	0.4	chr12	4613166	4613395	(128661914)	+	MIR	SINE/MIR	2	250	(12)	785793
9972	14.7	6.6	5.8	chr12	12105946	12107100	(121168209)	+	L1M4c	LINE/L1	8	1144	(5240)	797526
588	33.4	9.1	5.2	chr12	12510579	12511220	(120764089)	C	L2b	LINE/L2	(9)	3366	2701	798263
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
2241	34.1	7.5	4.1	chr12	23444958	23446304	(109829005)	C	L2b	LINE/L2	(1241)	2178	782	813591
3982	18.3	13.6	2.1	chr12	27705293	27706152	(105569157)	C	LTR28B	LTR/ERV1	(0)	974	1	819983
285	25.0	0.7	13.0	chr12	27706153	27706223	(105569086)	C	L1ME4b	LINE/L1	(341)	551	484	819981
395	31.5	2.9	2.4	chr12	46793839	46793987	(86481322)	+	MIR3	SINE/MIR	42	194	(36)	842717
1408	16.4	1.7	0.0	chr12	47607565	47607796	(85667513)	+	LTR8B	LTR/ERV1	583	818	(2)	843949
338	21.9	0.0	0.0	chr12	47607887	47607950	(85667359)	C	MLT1A-int	LTR/ERVL-MaLR	(993)	742	679	843945
1116	26.9	4.1	1.9	chr12	68895214	68895524	(64379785)	+	MLT1I	LTR/ERVL-MaLR	78	395	(16)	878300
716	8.8	0.0	0.0	chr12	68895698	68895777	(64379532)	+	AluSz	SINE/Alu	1	80	(232)	878301
4364	12.9	0.8	0.9	chr12	76195518	76196152	(57079157)	C	MER41B	LTR/ERV1	(0)	634	1	888828
887	25.8	10.7	2.6	chr12	88527550	88527967	(44747342)	+	L1MC4	LINE/L1	7179	7634	(408)	905609
2284	20.1	7.1	0.7	chr12	88527968	88528428	(44746881)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	13	905610
313	33.1	3.6	3.6	chr12	100070019	100070156	(33205153)	+	MIRc	SINE/MIR	2	139	(129)	924800
1822	11.7	10.1	0.0	chr12	100070291	100070556	(33204753)	C	AluSp	SINE/Alu	(17)	296	1	924801
309	32.1	6.7	0.9	chr12	108203736	108203848	(25071461)	C	MLT1K-int	LTR/ERVL-MaLR	(51)	1336	1217	939733
182	30.5	7.9	3.5	chr12	108203894	108203978	(25071331)	C	L2b	LINE/L2	(531)	2888	2800	939727
226	26.9	1.5	0.0	chr12	109093015	109093081	(24182228)	C	MER5A	DNA/hAT-Charlie	(21)	168	101	941723
195	32.5	0.0	5.9	chr12	109093054	109093138	(24182171)	C	MER5B	DNA/hAT-Charlie	(96)	82	3	941724
375	21.0	3.6	0.0	chr12	109093139	109093207	(24182102)	C	MIR3	SINE/MIR	(50)	158	87	941725
1567	29.1	4.7	0.7	chr12	114305741	114306186	(18969123)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	48	953437
323	18.3	2.4	7.9	chr12	115565354	115565442	(17709867)	+	L1ME3G	LINE/L1	5516	5583	(541)	956289
387	28.1	7.8	2.7	chr12	115565442	115565624	(17709685)	+	L1M5	LINE/L1	5550	5742	(382)	956290
1947	14.1	1.4	0.3	chr12	117057109	117057398	(16217911)	C	AluJo	SINE/Alu	(19)	293	1	959464
309	24.1	8.2	5.9	chr12	117057409	117057527	(16217782)	C	Charlie4z	DNA/hAT-Charlie	(35)	132	11	959465
919	14.9	14.1	1.0	chr12	117057558	117057760	(16217549)	+	L1MB8	LINE/L1	5565	5798	(380)	959466
335	30.1	13.3	8.5	chr12	117192072	117192434	(16082875)	+	L2c	LINE/L2	2998	3380	(7)	959749
486	29.8	4.3	7.1	chr12	132087490	132087781	(1187528)	C	L1ME3G	LINE/L1	(353)	571	287	989057
2290	9.8	0.0	4.3	chr12	132087961	132088285	(1187024)	C	AluSz	SINE/Alu	(1)	311	1	989059
244	34.6	14.3	5.5	chr13	19693059	19693419	(94670909)	+	L2c	LINE/L2	2940	3337	(50)	992825
792	19.9	10.1	2.5	chr13	20772337	20772537	(93591791)	+	MER20	DNA/hAT-Charlie	1	218	(1)	994838
1111	17.6	12.2	3.4	chr13	23038877	23039169	(91325159)	C	LTR25	LTR/ERV1	(0)	844	566	998260
286	15.4	4.4	1.5	chr13	23039166	23039231	(91325097)	C	LTR25	LTR/ERV1	(364)	480	413	998261
189	29.0	9.1	0.0	chr13	27268908	27269007	(87095321)	C	L2b	LINE/L2	(785)	2634	2525	1004622
1244	24.4	3.4	1.8	chr13	27269029	27269391	(87094937)	+	MLT1H	LTR/ERVL-MaLR	13	405	(190)	1004624
22	30.9	0.9	4.4	chr13	28532049	28532161	(85832167)	+	A-rich	Low_complexity	1	114	(0)	1006903
1335	26.9	9.9	1.4	chr13	38310564	38311329	(76052999)	+	ERV3-16A3_I-int	LTR/ERVL	4472	5226	(0)	1021073
1092	28.9	8.5	3.9	chr13	38311330	38311383	(76052945)	+	LTR16B1	LTR/ERVL	1	49	(431)	1021073
2621	6.2	0.0	0.7	chr13	38311384	38311692	(76052636)	+	AluYh3	SINE/Alu	1	307	(4)	1021076
702	29.5	4.4	1.8	chr13	45187569	45187789	(69176539)	+	Tigger19a	DNA/TcMar-Tigger	84	310	(13)	1031760
273	24.1	1.2	2.5	chr13	48778384	48778464	(65585864)	C	MLT1J-int	LTR/ERVL-MaLR	(58)	1329	1250	1037322
2267	8.7	0.0	3.5	chr13	52616906	52617215	(61747113)	+	AluSg	SINE/Alu	3	301	(9)	1043372
266	28.4	1.9	5.6	chr13	52617810	52617917	(61746411)	C	MIR3	SINE/MIR	(68)	140	37	1043373
2279	11.0	0.0	0.3	chr13	62163951	62164259	(52200069)	C	AluY	SINE/Alu	(3)	308	1	1055648
825	32.4	2.9	8.9	chr13	62164260	62164610	(52199718)	C	MLT1F1	LTR/ERVL-MaLR	(170)	399	46	1055647
4060	25.2	4.7	4.7	chr13	62164631	62165056	(52199272)	C	MLT1F1-int	LTR/ERVL-MaLR	(0)	1489	1063	1055647
10996	10.4	0.4	3.3	chr13	65387234	65388861	(48975467)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1059742
4397	16.6	10.6	3.5	chr13	66760366	66761357	(47602971)	+	MER11C	LTR/ERVK	1	1071	(0)	1061422
3352	26.9	6.7	6.1	chr13	66761358	66762152	(47602176)	C	L1M1	LINE/L1	(4929)	2636	1877	1061421
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
14	17.7	0.0	0.0	chr13	69008835	69008866	(45355462)	+	(ATGTGT)n	Simple_repeat	1	32	(0)	1064242
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
2297	32.5	4.5	5.2	chr13	79207050	79208133	(35156195)	+	ERV3-16A3_I-int	LTR/ERVL	4067	5142	(84)	1078597
447	26.6	0.7	10.1	chr13	79208212	79208370	(35155958)	+	LTR16A1	LTR/ERVL	8	151	(305)	1078598
2636	14.0	3.5	1.1	chr13	79208371	79208811	(35155517)	+	LTR32	LTR/ERVL	1	452	(5)	1078599
2154	11.7	1.0	0.0	chr13	85005739	85006028	(29358300)	+	AluSz	SINE/Alu	5	297	(15)	1085975
4422	8.5	0.2	0.0	chr13	85050224	85050800	(29313528)	C	HERVL-int	LTR/ERVL	(497)	5157	4580	1086026
2548	8.9	2.9	1.9	chr13	85050801	85051178	(29313150)	C	THE1A-int	LTR/ERVL-MaLR	(1198)	382	1	1086024
6204	17.5	2.9	6.7	chr13	87078927	87080241	(27284087)	C	LTR2752	LTR/ERV1	(0)	1263	1	1088544
1932	19.6	4.7	1.0	chr13	88541113	88541520	(25822808)	+	MSTC	LTR/ERVL-MaLR	3	426	(2)	1090442
1345	22.2	8.2	3.9	chr13	92775996	92776551	(21587777)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	14	1095998
544	0.0	0.0	22.3	chr14	20653099	20653192	(86390526)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128415
593	12.1	0.0	3.0	chr14	22115316	22115414	(84928304)	+	AluSx3	SINE/Alu	216	311	(0)	1130763
342	33.7	8.5	0.0	chr14	22887831	22888002	(84155716)	C	MIR3	SINE/MIR	(18)	190	3	1131900
324	28.1	11.8	6.8	chr14	24320567	24320707	(82723011)	C	L4_B_Mam	LINE/RTE-X	(440)	4501	4353	1134068
1011	18.1	7.7	0.0	chr14	24320708	24320900	(82722818)	+	MER3	DNA/hAT-Charlie	1	209	(0)	1134069
324	28.1	11.8	6.8	chr14	24320901	24320934	(82722784)	C	L4_B_Mam	LINE/RTE-X	(589)	4352	4317	1134068
805	11.4	0.0	2.4	chr14	24320935	24321060	(82722658)	C	MER1B	DNA/hAT-Charlie	(0)	339	217	1134070
18	4.8	0.0	0.0	chr14	24321089	24321110	(82722608)	+	(T)n	Simple_repeat	1	22	(0)	1134071
18	8.7	0.0	0.0	chr14	28770917	28770941	(78272777)	+	(GA)n	Simple_repeat	1	25	(0)	1139697
17	26.1	0.0	0.0	chr14	28770985	28771025	(78272693)	+	GA-rich	Low_complexity	1	41	(0)	1139698
1219	20.8	0.0	0.0	chr14	39567620	39567816	(67475902)	C	AluJb	SINE/Alu	(21)	291	95	1155899
454	28.8	2.8	3.5	chr14	39567817	39567960	(67475758)	C	LTR16D	LTR/ERVL	(343)	308	166	1155900
374	36.7	5.1	5.1	chr14	48441252	48441547	(58602171)	+	L3	LINE/CR1	1538	1833	(2266)	1166752
22	10.7	0.0	4.5	chr14	48441590	48441633	(58602085)	+	(AACA)n	Simple_repeat	1	44	(0)	1166753
2593	8.9	1.6	0.8	chr14	50554127	50554498	(56489220)	+	LTR57-int	LTR/ERVL	4969	5343	(0)	1170140
2256	17.9	2.2	0.7	chr14	50554499	50554903	(56488815)	+	LTR57	LTR/ERVL	1	411	(0)	1170140
1153	11.4	0.0	0.0	chr14	56499824	56499997	(50543721)	C	AluSz6	SINE/Alu	(0)	312	134	1179280
1017	13.0	0.0	0.0	chr14	56500001	56500131	(50543587)	C	AluSx	SINE/Alu	(181)	131	1	1179281
3366	9.6	1.7	0.2	chr14	56500132	56500592	(50543126)	C	MER41B	LTR/ERV1	(166)	468	1	1179282
340	24.4	12.4	1.6	chr14	81137103	81137231	(25906487)	C	MER5A	DNA/hAT-Charlie	(23)	166	22	1220168
423	18.3	1.2	0.0	chr14	81137331	81137412	(25906306)	+	MLT1G	LTR/ERVL-MaLR	4	86	(505)	1220169
1437	18.7	6.3	0.3	chr14	81137431	81137751	(25905967)	+	MLT1G	LTR/ERVL-MaLR	246	576	(15)	1220169
272	20.0	0.0	0.0	chr14	88262612	88262661	(18781057)	+	MIRb	SINE/MIR	202	251	(17)	1230164
330	28.5	7.1	3.4	chr14	89703089	89703237	(17340481)	C	LTR16A2	LTR/ERVL	(328)	167	13	1232572
2338	15.2	7.7	0.8	chr14	89703281	89703678	(17340040)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1232573
237	27.0	7.4	4.9	chr14	92482878	92483026	(14560692)	+	MIR3	SINE/MIR	26	181	(49)	1237640
191	29.6	6.9	0.0	chr14	92483011	92483064	(14560654)	C	L2c	LINE/L2	(34)	3353	3296	1237641
282	33.2	10.9	0.0	chr14	95741117	95741321	(11302397)	+	MIR	SINE/MIR	4	233	(29)	1243623
2188	21.4	20.3	0.7	chr14	100645427	100646041	(6397677)	C	LTR41	LTR/ERVL	(0)	768	2	1252207
737	33.5	5.0	3.0	chr14	100646099	100646362	(6397356)	C	ERVL-E-int	LTR/ERVL	(66)	5601	5339	1252208
85	25.2	3.2	3.1	chr14	100828321	100828629	(6215089)	+	(TCCTCCC)n	Simple_repeat	1	319	(0)	1252460
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
347	29.1	6.3	0.7	chr15	30730573	30730707	(71260482)	C	L1MD	LINE/L1	(2366)	3780	3638	1277528
267	36.2	5.2	4.8	chr15	30730711	30730980	(71260209)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	238	1277542
12	16.4	2.8	2.7	chr15	38054667	38054702	(63936487)	+	(AGTGTGG)n	Simple_repeat	1	37	(0)	1287672
344	35.2	2.5	5.2	chr15	38054778	38055026	(63936163)	C	MLT1L-int	LTR/ERVL-MaLR	(0)	1387	1146	1287673
13	16.9	0.0	8.5	chr15	56197659	56197705	(45793484)	+	GA-rich	Low_complexity	1	47	(0)	1316832
788	23.9	1.2	1.2	chr15	56197810	56197970	(45793219)	+	LTR86A1	LTR/ERVL	1	161	(352)	1316833
720	23.0	1.7	3.9	chr15	61789710	61789890	(40201299)	+	LTR33	LTR/ERVL	1	177	(338)	1325913
15	0.0	0.0	4.3	chr15	61790100	61790122	(40201067)	+	(AGA)n	Simple_repeat	1	23	(0)	1325914
2080	8.8	1.1	0.0	chr15	63410202	63410462	(38580727)	C	AluSg	SINE/Alu	(45)	265	2	1328494
2196	10.8	0.0	1.0	chr15	64869168	64869462	(37121727)	C	AluSg	SINE/Alu	(18)	292	1	1331381
1586	25.7	8.9	5.2	chr15	64869463	64870166	(37121023)	C	L1MC4	LINE/L1	(135)	7907	7148	1331379
1252	25.9	6.1	2.5	chr15	70628489	70628974	(31362215)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	45	1342499
815	26.3	14.1	1.6	chr15	70628998	70629318	(31361871)	C	LTR16A	LTR/ERVL	(22)	429	62	1342500
330	23.3	10.7	3.3	chr15	74776599	74776646	(27214543)	C	MIR3	SINE/MIR	(154)	76	23	1349505
8782	19.1	5.7	5.9	chr15	75143931	75146047	(26845142)	C	MER52D	LTR/ERV1	(0)	2123	10	1350274
1009	28.9	9.8	3.6	chr15	78561603	78562073	(23429116)	C	L2b	LINE/L2	(188)	3187	2630	1356179
2055	10.8	2.8	0.0	chr15	78562074	78562350	(23428839)	+	AluSp	SINE/Alu	1	285	(28)	1356180
556	22.4	6.7	0.0	chr15	79129917	79130041	(22861148)	C	LTR16C	LTR/ERVL	(0)	489	356	1357297
575	28.4	11.5	2.3	chr15	79130060	79130279	(22860910)	+	LTR16E2	LTR/ERVL	1	243	(325)	1357298
3466	12.2	5.9	0.5	chr15	79130946	79131506	(22859683)	+	LTR49	LTR/ERV1	3	595	(0)	1357300
667	28.1	10.7	1.4	chr15	79131705	79131924	(22859265)	+	LTR16E2	LTR/ERVL	1	243	(325)	1357301
474	31.4	21.4	4.9	chr15	85455527	85456158	(16535031)	C	L3	LINE/CR1	(1074)	3025	2261	1367832
228	37.2	2.8	3.5	chr15	88405107	88405248	(13585941)	C	LTR16D	LTR/ERVL	(286)	389	249	1372345
1152	19.0	17.8	5.1	chr15	88405660	88406030	(13585159)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1372346
2310	11.1	0.3	0.0	chr15	90661603	90661900	(11329289)	C	AluSx1	SINE/Alu	(13)	299	1	1376805
958	15.3	5.2	2.7	chr15	90661901	90661926	(11329263)	+	MER44A	DNA/TcMar-Tigger	169	193	(146)	1376803
610	25.3	9.9	2.7	chr15	90662079	90662265	(11328924)	+	L2a	LINE/L2	3225	3426	(0)	1376806
24	10.8	6.0	0.0	chr15	97046398	97046447	(4944742)	+	(GTTTT)n	Simple_repeat	1	53	(0)	1386711
18	16.2	0.0	4.4	chr15	97699471	97699515	(4291674)	+	(ATTA)n	Simple_repeat	1	45	(0)	1387540
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
2190	9.4	1.9	0.4	chr16	21708091	21708463	(68629882)	C	MER1A	DNA/hAT-Charlie	(112)	417	1	1438460
528	19.2	4.6	2.3	chr16	21708464	21708591	(68629754)	C	MER5A	DNA/hAT-Charlie	(58)	131	1	1438459
246	8.3	2.7	0.0	chr16	21708592	21708627	(68629718)	C	MIR3	SINE/MIR	(51)	157	121	1438464
290	30.5	26.4	4.4	chr16	22166506	22166710	(68171635)	+	MIRb	SINE/MIR	5	254	(14)	1439425
224	19.1	2.1	0.0	chr16	22167020	22167066	(68171279)	+	MIRc	SINE/MIR	34	81	(187)	1439426
2211	9.6	0.4	0.0	chr16	22167166	22167484	(68170861)	C	AluSx	SINE/Alu	(0)	312	1	1439427
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
799	27.4	10.3	12.1	chr16	54533059	54533580	(35804765)	C	LTR33A	LTR/ERVL	(8)	512	1	1479702
1274	21.4	7.0	3.8	chr16	58615800	58616088	(31722257)	+	AluJr4	SINE/Alu	1	299	(13)	1487444
2478	6.1	0.0	0.7	chr16	58616109	58616405	(31721940)	C	AluSg7	SINE/Alu	(14)	295	1	1487445
995	15.6	1.2	1.8	chr16	66553014	66553180	(23785165)	+	FRAM	SINE/Alu	1	166	(10)	1499953
342	32.8	7.6	5.5	chr16	67834041	67834221	(22504124)	+	MIRb	SINE/MIR	84	268	(0)	1502444
4375	16.1	5.0	5.3	chr16	71762299	71763092	(18575253)	+	MER21B	LTR/ERVL	1	811	(57)	1510313
1452	30.5	9.3	0.0	chr16	78139710	78140224	(12198121)	C	LTR16E2	LTR/ERVL	(0)	568	1	1521203
1625	22.2	5.2	7.0	chr16	78140368	78140842	(12197503)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	1521204
2189	13.3	5.4	1.1	chr16	84677901	84678273	(5660072)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1533363
2298	11.1	0.7	0.0	chr16	84678394	84678700	(5659645)	+	AluSz	SINE/Alu	1	309	(3)	1533364
236	32.8	4.7	5.4	chr16	86106692	86106820	(4231525)	C	L2a	LINE/L2	(1)	3425	3298	1536054
1047	27.5	12.2	2.3	chr16	86106989	86107784	(4230561)	+	L2a	LINE/L2	2530	3418	(8)	1536055
321	25.8	7.9	6.6	chr16	86231063	86231199	(4107146)	+	Charlie4z	DNA/hAT-Charlie	16	154	(13)	1536299
547	27.3	5.5	2.4	chr16	86231360	86231569	(4106776)	C	L1ME3A	LINE/L1	(0)	6173	5957	1536300
1437	16.4	18.7	6.2	chr16	87031487	87031816	(3306529)	+	MSTA	LTR/ERVL-MaLR	1	396	(32)	1537678
1172	23.3	8.7	5.1	chr16	88360320	88360479	(1977866)	C	L1ME2z	LINE/L1	(282)	6162	5994	1539864
3563	12.0	5.3	0.0	chr16	88360851	88361351	(1976994)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1539866
2404	9.3	0.3	0.7	chr17	1287351	1287660	(81969781)	C	AluY	SINE/Alu	(2)	309	1	1546774
436	25.2	3.7	1.5	chr17	7865185	7865317	(75392124)	C	MIR	SINE/MIR	(62)	200	65	1559652
630	20.0	37.0	1.1	chr17	7865398	7865751	(75391690)	C	MLT1G1	LTR/ERVL-MaLR	(70)	509	3	1559653
181	27.5	1.4	9.2	chr17	7865828	7865903	(75391538)	+	MIRc	SINE/MIR	13	82	(186)	1559654
5427	29.3	8.6	5.4	chr17	14933961	14937044	(68320397)	C	ERV3-16A3_I-int	LTR/ERVL	(337)	4889	1702	1572248
3853	17.0	4.2	4.6	chr17	17067057	17067639	(66189802)	C	MER44C	DNA/TcMar-Tigger	(129)	604	1	1576044
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
14076	21.5	0.2	0.1	chr17	26878921	26879385	(56378056)	+	(TGGAA)n	Simple_repeat	4	470	(0)	1585978
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
4243	17.1	2.7	4.1	chr17	27694961	27695819	(55561622)	C	MER11A	LTR/ERVK	(0)	1071	225	1587250
658	24.9	3.8	2.2	chr17	29110942	29111122	(54146319)	+	L2a	LINE/L2	3234	3417	(9)	1589921
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
1528	26.9	9.3	2.4	chr17	34800439	34800937	(48456504)	C	LTR16E1	LTR/ERVL	(1)	537	1	1601094
1131	33.6	4.3	3.6	chr17	34801052	34801997	(48455444)	C	ERV3-16A3_I-int	LTR/ERVL	(105)	5121	4174	1601095
221	28.8	0.0	1.5	chr17	34986955	34987021	(48270420)	+	MIR	SINE/MIR	2	67	(195)	1601473
657	27.0	9.7	1.8	chr17	37286780	37287065	(45970376)	+	LTR33A	LTR/ERVL	279	793	(2)	1605507
196	34.9	0.0	0.0	chr17	37287076	37287141	(45970300)	+	MIRb	SINE/MIR	172	237	(31)	1605506
525	25.0	13.8	7.1	chr17	41687787	41688013	(41569428)	+	MER102a	DNA/hAT-Charlie	77	330	(0)	1614052
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
17	22.2	2.9	4.3	chr17	45019336	45019403	(38238038)	+	(GCGG)n	Simple_repeat	1	70	(0)	1621191
384	29.5	7.3	1.4	chr17	45367012	45367152	(37890289)	+	MIRb	SINE/MIR	43	192	(76)	1621906
366	31.6	10.0	3.6	chr17	45858279	45858501	(37398940)	C	MLT1O	LTR/ERVL-MaLR	(8)	534	296	1622920
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
1426	17.4	4.8	1.2	chr17	57010992	57011250	(26246191)	C	AluJr	SINE/Alu	(11)	301	33	1642441
5175	22.4	6.6	2.7	chr17	57011251	57011508	(26245933)	+	ERVL-E-int	LTR/ERVL	5407	5667	(0)	1642438
1262	18.0	23.9	0.4	chr17	57011509	57011984	(26245457)	+	MLT2F	LTR/ERVL	1	601	(62)	1642438
389	23.8	14.4	0.0	chr17	57305976	57306076	(25951365)	C	L2a	LINE/L2	(4)	3422	3305	1643047
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
1933	7.7	0.0	1.6	chr17	62028619	62028865	(21228576)	+	AluYh3	SINE/Alu	60	302	(9)	1652114
1520	19.3	4.2	1.8	chr17	62028876	62029150	(21228291)	+	AluJr4	SINE/Alu	1	282	(30)	1652115
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
1595	16.4	4.8	3.9	chr17	67655652	67655937	(15601504)	+	AluJr	SINE/Alu	1	289	(23)	1662483
240	13.3	0.0	4.3	chr17	67655944	67655990	(15601451)	C	MLT1A0	LTR/ERVL-MaLR	(315)	50	6	1662481
243	29.9	3.8	2.5	chr17	67656019	67656097	(15601344)	+	MIRb	SINE/MIR	94	173	(95)	1662484
805	19.7	5.0	17.1	chr17	67656216	67656583	(15600858)	C	MLT1C	LTR/ERVL-MaLR	(69)	321	1	1662485
2110	13.2	0.0	0.7	chr17	75980055	75980364	(7277077)	+	AluJb	SINE/Alu	1	308	(4)	1677149
2259	28.0	7.8	1.4	chr17	77983155	77984049	(5273392)	+	ERVL-E-int	LTR/ERVL	4711	5667	(0)	1681002
531	21.4	4.4	10.0	chr17	77984050	77984239	(5273202)	+	LTR41C	LTR/ERVL	1	188	(343)	1681002
1563	16.3	4.8	3.8	chr17	77984240	77984528	(5272913)	+	AluJo	SINE/Alu	2	293	(19)	1681003
2497	17.4	3.1	1.9	chr17	80152189	80152715	(3104726)	+	MER41B	LTR/ERV1	1	596	(38)	1684545
659	22.5	4.4	1.7	chr17	81792544	81793663	(1463778)	+	(CA)n	Simple_repeat	1	1175	(0)	1686733
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
659	22.5	4.4	1.7	chr17	81793921	81794546	(1462895)	+	(CA)n	Simple_repeat	1	626	(0)	1686735
13	15.8	2.7	2.6	chr17	81926849	81926885	(1330556)	+	(CCACCTC)n	Simple_repeat	1	38	(0)	1686914
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
1386	28.1	1.2	2.7	chr18	583795	584204	(79789081)	C	LTR16	LTR/ERVL	(0)	438	35	1690047
2393	28.1	8.0	7.8	chr18	584265	584296	(79788989)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	5207	1690048
2258	9.5	2.6	0.0	chr18	584297	584591	(79788694)	C	AluSc8	SINE/Alu	(8)	303	1	1690049
14	25.4	1.9	1.9	chr18	23503490	23503542	(56869743)	+	(AGCCGC)n	Simple_repeat	1	54	(0)	1716343
20	20.5	3.6	0.0	chr18	23503782	23503837	(56869448)	+	(CCCGT)n	Simple_repeat	1	58	(0)	1716344
9611	12.1	8.9	1.9	chr18	26181941	26182808	(54190477)	+	Tigger1	DNA/TcMar-Tigger	652	1611	(807)	1720464
1040	17.4	19.0	1.6	chr18	31997244	31997490	(48375795)	C	AluJr4	SINE/Alu	(10)	302	3	1728599
6455	10.6	13.9	1.3	chr18	34516068	34517142	(45856143)	C	MER11B	LTR/ERVK	(4)	1232	1	1732061
268	18.6	10.7	0.2	chr18	35616847	35616926	(44756359)	+	MIR	SINE/MIR	107	199	(69)	1733591
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
276	20.0	3.2	1.6	chr18	37953011	37953071	(42420214)	C	LTR33A	LTR/ERVL	(0)	520	459	1736738
1084	31.0	8.2	2.0	chr18	37953179	37953737	(42419548)	C	ERVL-E-int	LTR/ERVL	(0)	5667	5071	1736739
1408	16.8	18.6	2.0	chr18	70704003	70704305	(9668980)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1785000
568	17.4	4.0	0.0	chr18	78158870	78158990	(2214295)	C	Tigger6a	DNA/TcMar-Tigger	(382)	701	576	1794308
488	27.1	4.3	3.3	chr18	78159220	78159402	(2213883)	C	Tigger6a	DNA/TcMar-Tigger	(583)	500	316	1794308
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
11534	13.3	2.9	2.2	chr18	80021997	80023821	(349464)	C	LTR25-int	LTR/ERV1	(4813)	2375	539	1796043
218	27.5	9.5	2.9	chr19	3180167	3180312	(55437304)	+	MIR3	SINE/MIR	15	172	(96)	1802576
43	0.0	0.0	0.0	chr19	3180466	3180502	(55437114)	+	(GT)n	Simple_repeat	1	37	(0)	1802577
1974	15.7	2.8	3.4	chr19	3913884	3913954	(54703662)	C	THE1B	LTR/ERVL-MaLR	(1)	363	298	1804325
2555	4.4	0.0	0.0	chr19	3913955	3914250	(54703366)	+	AluY	SINE/Alu	1	296	(15)	1804326
836	26.6	8.5	6.8	chr19	5100048	5100381	(53517235)	C	HAL1	LINE/L1	(983)	1524	1165	1807197
1310	28.7	11.9	2.7	chr19	8396325	8397353	(50220263)	C	L2a	LINE/L2	(1)	3425	2263	1815209
1535	16.0	3.0	3.0	chr19	9641765	9642066	(48975550)	C	LTR7B	LTR/ERV1	(0)	464	163	1817816
292	16.5	7.6	8.6	chr19	9642123	9642215	(48975401)	C	LTR7Y	LTR/ERV1	(185)	287	127	1817817
1490	15.8	11.0	0.4	chr19	10017397	10017655	(48599961)	+	AluJr	SINE/Alu	1	290	(22)	1818694
444	31.6	1.3	3.8	chr19	12777855	12778012	(45839604)	C	MIRb	SINE/MIR	(0)	268	115	1825195
2035	13.7	3.2	0.0	chr19	13330589	13330888	(45286728)	C	AluSz6	SINE/Alu	(2)	310	1	1826463
298	23.2	0.0	9.5	chr19	14118537	14118631	(44498985)	C	MIR	SINE/MIR	(69)	193	108	1828627
809	26.1	3.2	3.6	chr19	14118741	14118959	(44498657)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1828628
238	36.3	8.5	7.8	chr19	15210791	15210882	(43406734)	+	L2c	LINE/L2	2970	3068	(319)	1831386
2400	7.7	1.9	1.3	chr19	15210883	15211192	(43406424)	C	AluSz	SINE/Alu	(0)	312	1	1831387
2024	11.0	0.0	2.8	chr19	19531719	19532039	(39085577)	C	AluSx1	SINE/Alu	(0)	312	1	1841143
14380	17.1	6.4	4.2	chr19	33851149	33852039	(24765577)	+	L1M2	LINE/L1	1992	2871	(3978)	1857417
2306	26.0	12.2	8.1	chr19	36222224	36222774	(22394842)	C	L1MC5a	LINE/L1	(2184)	593	2	1862159
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
280	28.4	0.0	3.9	chr19	44893084	44893160	(13724456)	C	L2b	LINE/L2	(0)	3375	3302	1879902
333	29.2	0.9	0.0	chr19	46173047	46173152	(12444464)	+	ERVL-E-int	LTR/ERVL	5517	5623	(44)	1883051
247	20.4	0.0	0.0	chr19	46173233	46173276	(12444340)	+	LTR33C	LTR/ERVL	30	73	(556)	1883054
475	33.2	2.5	4.6	chr19	46173302	46173379	(12444237)	+	ERVL-E-int	LTR/ERVL	2257	2335	(3332)	1883055
2300	16.8	5.9	0.2	chr19	46173380	46173779	(12443837)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	1883056
2444	13.6	6.2	1.0	chr19	46236271	46236670	(12380946)	+	MSTB	LTR/ERVL-MaLR	1	422	(4)	1883169
481	31.5	3.2	5.1	chr19	46236671	46236752	(12380864)	C	ERVL-B4-int	LTR/ERVL	(3320)	2394	2314	1883168
259	20.4	0.0	0.0	chr19	46236774	46236817	(12380799)	C	LTR33C	LTR/ERVL	(556)	73	30	1883170
347	30.7	1.3	1.3	chr19	46236865	46237016	(12380600)	C	ERVL-E-int	LTR/ERVL	(0)	5667	5516	1883170
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
612	15.2	9.5	0.0	chr19	52640530	52640634	(5976982)	C	AluSc	SINE/Alu	(12)	297	182	1897865
3780	14.8	4.6	0.3	chr19	54069422	54070026	(4547590)	C	MER41B	LTR/ERV1	(0)	634	3	1900982
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
634	32.0	5.4	5.1	chr19	57614748	57615297	(1002319)	C	L2	LINE/L2	(539)	2880	2329	1908052
2744	13.6	4.5	4.9	chr19	57615469	57615978	(1001638)	C	LTR10G	LTR/ERV1	(15)	508	1	1908053
14	24.3	2.0	2.0	chr2	3575498	3575547	(238617982)	+	G-rich	Low_complexity	1	51	(0)	1914686
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
20	13.8	0.0	7.3	chr2	27429023	27429077	(214764452)	+	G-rich	Low_complexity	1	55	(0)	1951815
47	0.0	0.0	0.0	chr2	30714314	30714356	(211479173)	+	(T)n	Simple_repeat	1	43	(0)	1957456
558	25.1	6.2	2.3	chr2	30714633	30714803	(211478726)	C	MIR3	SINE/MIR	(28)	180	3	1957457
1350	27.4	17.9	1.4	chr2	32381998	32382638	(209810891)	C	LTR50	LTR/ERVL	(25)	770	1	1960218
2149	13.5	0.0	0.0	chr2	32382726	32383021	(209810508)	C	AluSg	SINE/Alu	(14)	296	1	1960219
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
481	29.3	1.8	0.0	chr2	40034296	40034462	(202159067)	C	LTR16	LTR/ERVL	(268)	170	1	1972052
438	33.0	2.2	2.2	chr2	40034541	40034723	(202158806)	+	MamGypLTR1a	LTR/Gypsy	45	227	(557)	1972054
1464	29.9	4.8	1.3	chr2	45150394	45150870	(197042659)	C	MLT1J	LTR/ERVL-MaLR	(16)	496	2	1980306
250	31.4	9.5	2.8	chr2	46127737	46127844	(196065685)	C	MLT1N2	LTR/ERVL-MaLR	(7)	555	440	1981768
705	26.5	4.1	2.1	chr2	47325564	47325756	(194867773)	+	MIRc	SINE/MIR	9	205	(63)	1983817
820	26.5	4.6	2.4	chr2	47325760	47326014	(194867515)	+	Charlie18a	DNA/hAT-Charlie	1	261	(81)	1983818
2215	11.7	0.3	0.7	chr2	48570053	48570352	(193623177)	+	AluSz	SINE/Alu	1	299	(13)	1986225
490	23.4	7.4	5.5	chr2	48570353	48570396	(193623133)	+	Chap1_Mam	DNA/hAT-Charlie	185	229	(113)	1986223
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
2126	10.5	2.3	2.0	chr2	61452319	61452623	(180740906)	C	AluSx	SINE/Alu	(6)	306	1	2004346
825	23.0	3.3	13.0	chr2	61452624	61452924	(180740605)	+	AluYj4	SINE/Alu	30	306	(5)	2004345
325	34.5	10.4	0.5	chr2	66945481	66945687	(175247842)	C	MIRc	SINE/MIR	(19)	249	20	2013423
1050	23.6	18.5	6.7	chr2	67234155	67234766	(174958763)	C	LTR41C	LTR/ERVL	(0)	701	1	2013795
376	31.2	2.7	2.3	chr2	67234767	67235025	(174958504)	C	ERVL-E-int	LTR/ERVL	(0)	5667	5408	2013795
14	15.3	2.6	2.6	chr2	74306934	74306971	(167886558)	+	(CCTGTG)n	Simple_repeat	1	39	(0)	2025183
1432	23.0	1.9	1.7	chr2	85802402	85802763	(156390766)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	2041528
2331	12.1	0.0	0.3	chr2	85802958	85803270	(156390259)	+	AluSz	SINE/Alu	1	312	(0)	2041529
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
42228	6.7	1.3	0.2	chr2	104587936	104593528	(137600001)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2063734
13	12.0	0.0	3.5	chr2	106194521	106194549	(135998980)	+	(GCGGC)n	Simple_repeat	1	29	(0)	2066008
2445	16.7	8.4	1.4	chr2	121532350	121532848	(120660681)	+	L1MC3	LINE/L1	7147	7683	(102)	2088815
1273	27.7	10.5	5.5	chr2	129229883	129230566	(112962963)	C	MER21C	LTR/ERVL	(122)	816	38	2100210
2087	12.5	0.3	0.0	chr2	129230592	129230880	(112962649)	+	AluSc	SINE/Alu	14	303	(6)	2100211
705	23.3	5.4	1.1	chr2	130589053	130589230	(111604299)	C	MER74A	LTR/ERVL	(0)	558	373	2102047
1015	25.2	6.7	0.3	chr2	130589229	130589523	(111604006)	+	MER74A	LTR/ERVL	243	557	(1)	2102048
240	13.2	1.1	0.0	chr2	134862185	134862230	(107331299)	+	MER33	DNA/hAT-Charlie	9	89	(120)	2108055
272	35.7	4.1	9.0	chr2	134862296	134862529	(107331000)	C	MamTip2	DNA/hAT-Tip100	(0)	305	84	2108056
3552	25.9	9.9	6.0	chr2	140586087	140588458	(101605071)	+	L1MD1	LINE/L1	19	2405	(4228)	2116290
723	31.4	8.9	6.0	chr2	145069401	145069881	(97123648)	C	LTR33A	LTR/ERVL	(3)	517	22	2122203
373	30.0	4.4	2.3	chr2	145070034	145070166	(97123363)	C	MLT1N2-int	LTR/ERVL-MaLR	(59)	1328	1193	2122204
1624	18.3	2.5	0.6	chr2	151824088	151824401	(90369128)	+	MER47A	DNA/TcMar-Tigger	47	366	(0)	2131414
32	5.4	0.0	0.0	chr2	151824479	151824517	(90369012)	+	(TAA)n	Simple_repeat	1	39	(0)	2131415
254	22.0	0.0	0.0	chr2	151824533	151824582	(90368947)	+	LTR41	LTR/ERVL	222	271	(497)	2131416
279	33.1	7.4	2.8	chr2	151998760	151998939	(90194590)	C	HAL1ME	LINE/L1	(1651)	814	626	2131673
538	30.0	11.1	8.3	chr2	151998965	151999472	(90194057)	C	HAL1ME	LINE/L1	(1931)	534	11	2131673
1226	18.1	4.1	7.2	chr2	152646039	152646315	(89547214)	+	AluJr	SINE/Alu	1	268	(44)	2132741
503	21.6	4.1	0.0	chr2	152646448	152646563	(89546966)	C	MER102c	DNA/hAT-Charlie	(142)	189	69	2132742
9405	12.3	8.2	0.3	chr2	154545939	154547393	(87646136)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2135101
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
293	33.3	5.4	1.4	chr2	174396005	174396147	(67797382)	+	MIRc	SINE/MIR	73	221	(47)	2163187
283	23.8	0.0	1.6	chr2	177742520	177742583	(64450946)	C	L2a	LINE/L2	(0)	3426	3364	2168030
2017	23.4	0.5	1.4	chr2	181728304	181728744	(60464785)	C	LTR16B	LTR/ERVL	(0)	463	27	2173067
3902	25.0	6.1	7.6	chr2	181728755	181730530	(60462999)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	3480	2173067
4288	12.8	0.0	0.9	chr2	191322770	191323409	(50870120)	C	MER41B	LTR/ERV1	(0)	634	1	2185691
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
979	28.0	8.5	2.2	chr2	206833519	206833928	(35359601)	C	LTR16	LTR/ERVL	(0)	451	1	2209193
457	30.2	2.8	0.7	chr2	206833929	206834068	(35359461)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	5084	2209193
2231	32.5	6.4	2.2	chr2	206834067	206835212	(35358317)	C	HERV16-int	LTR/ERVL	(3435)	1561	364	2209194
236	17.3	3.7	0.0	chr2	207154767	207154818	(35038711)	C	MIRc	SINE/MIR	(128)	140	87	2209606
204	30.2	1.6	0.0	chr2	207154870	207154932	(35038597)	C	MIR3	SINE/MIR	(35)	173	110	2209607
542	28.7	6.5	6.9	chr2	207155031	207155292	(35038237)	+	MIR	SINE/MIR	2	262	(0)	2209608
2221	10.5	0.0	1.6	chr2	215383002	215383307	(26810222)	C	AluSz	SINE/Alu	(11)	301	1	2221005
12	8.9	4.2	0.0	chr2	215409942	215409965	(26783564)	+	(GGT)n	Simple_repeat	1	25	(0)	2221046
20	0.0	0.0	0.0	chr2	215410131	215410152	(26783377)	+	(AC)n	Simple_repeat	1	22	(0)	2221047
3554	11.8	12.9	2.1	chr2	216608199	216608762	(25584767)	C	MER41B	LTR/ERV1	(0)	634	1	2223099
3515	26.3	7.1	3.4	chr2	223577104	223577607	(18615922)	C	BLACKJACK	DNA/hAT-Blackjack	(2446)	523	7	2234438
3303	11.0	3.6	0.0	chr2	223646652	223647105	(18546424)	C	MER4A1	LTR/ERV1	(1)	471	1	2234560
828	30.4	4.7	4.2	chr2	223647145	223647560	(18545969)	C	LTR16A	LTR/ERVL	(0)	438	1	2234561
720	29.4	4.3	3.6	chr2	223647561	223647839	(18545690)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	4946	2234561
259	22.2	10.6	6.0	chr2	229807004	229807137	(12386392)	C	L1ME4a	LINE/L1	(28)	6096	5956	2244117
262	30.9	7.2	5.4	chr2	229807166	229807370	(12386159)	C	L1ME4a	LINE/L1	(241)	5883	5675	2244117
358	32.2	0.3	1.2	chr2	229807410	229807544	(12385985)	C	MIR3	SINE/MIR	(91)	177	39	2244118
1083	24.8	15.9	1.0	chr2	238683824	238684234	(3509295)	C	LTR16C	LTR/ERVL	(2)	487	4	2258116
268	31.9	7.3	8.5	chr2	238684235	238684425	(3509104)	C	L3	LINE/CR1	(80)	4019	3828	2258115
670	30.7	8.6	7.8	chr2	238742620	238743170	(3450359)	C	MLT1G1	LTR/ERVL-MaLR	(22)	557	2	2258183
507	27.1	4.5	0.6	chr2	239446545	239446715	(2746814)	C	L1ME3B	LINE/L1	(305)	5937	5760	2258929
795	23.6	12.3	15.8	chr2	240344991	240345472	(1848057)	+	MLT1H1-int	LTR/ERVL-MaLR	1009	1471	(18)	2259957
397	28.4	0.9	0.9	chr2	240345488	240345597	(1847932)	+	MLT1H1	LTR/ERVL-MaLR	1	110	(445)	2259957
314	15.5	12.3	0.0	chr2	240345599	240345669	(1847860)	C	L1MB2	LINE/L1	(196)	5975	5895	2259959
550	26.8	7.3	3.6	chr2	240345671	240346004	(1847525)	C	MLT1C	LTR/ERVL-MaLR	(104)	401	23	2259960
722	29.6	19.0	4.6	chr20	19612642	19613355	(44830812)	+	L2a	LINE/L2	2647	3381	(45)	2294377
1871	7.9	2.6	0.0	chr20	21478871	21479097	(42965070)	C	AluY	SINE/Alu	(78)	233	1	2297161
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
11700	31.6	3.7	2.2	chr20	30850868	30853617	(33590550)	+	PRIMA41-int	LTR/ERV1	1728	4517	(3239)	2305514
182	25.8	8.8	1.6	chr20	38826611	38826673	(25617494)	+	OldhAT1	DNA/hAT-Ac	687	754	(2094)	2322959
1524	24.4	9.9	1.3	chr20	46971188	46971640	(17472527)	C	MLT1J	LTR/ERVL-MaLR	(15)	497	2	2338907
2290	11.2	0.0	0.3	chr20	49209767	49210078	(15234089)	+	AluSc8	SINE/Alu	1	311	(0)	2343846
313	24.1	0.0	0.0	chr20	49210172	49210250	(15233917)	C	HAL1	LINE/L1	(710)	1797	1719	2343847
502	18.8	3.0	0.0	chr20	49210279	49210374	(15233793)	C	HAL1	LINE/L1	(852)	1655	1557	2343847
16	20.6	0.0	4.4	chr20	49210450	49210494	(15233673)	+	(TCC)n	Simple_repeat	1	45	(0)	2343848
913	15.9	0.0	0.0	chr20	50289227	50289358	(14154809)	+	FLAM_C	SINE/Alu	2	133	(10)	2346558
391	21.3	11.1	8.1	chr20	50289481	50289577	(14154590)	C	MER102a	DNA/hAT-Charlie	(98)	232	128	2346559
1249	8.4	16.2	0.5	chr20	50289578	50289769	(14154398)	C	MER30	DNA/hAT-Charlie	(2)	228	1	2346560
247	25.4	0.0	1.5	chr20	52915741	52915808	(11528359)	+	LTR16A	LTR/ERVL	1	67	(384)	2352428
882	28.8	5.0	0.0	chr20	52915875	52916138	(11528029)	+	LTR16A	LTR/ERVL	174	451	(0)	2352428
16	23.8	2.2	2.1	chr20	57736409	57736454	(6707713)	+	(AC)n	Simple_repeat	1	47	(0)	2361688
849	23.6	10.1	3.5	chr20	57736455	57736713	(6707454)	C	MLT1K	LTR/ERVL-MaLR	(298)	297	20	2361689
310	31.9	2.5	1.6	chr20	57736734	57736854	(6707313)	+	L2c	LINE/L2	2321	2442	(977)	2361690
1952	31.6	10.2	8.0	chr20	60023989	60024720	(4419447)	+	MLT1J-int	LTR/ERVL-MaLR	571	1387	(0)	2365352
883	26.1	11.1	5.5	chr20	60024721	60025194	(4418973)	+	MLT1J	LTR/ERVL-MaLR	1	504	(8)	2365352
2127	13.3	0.7	0.0	chr20	61716634	61716934	(2727233)	+	AluSx1	SINE/Alu	7	309	(3)	2367681
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
259	29.9	18.6	1.5	chr21	15006853	15007114	(31702869)	C	L2c	LINE/L2	(151)	3236	2920	2378544
361	25.2	10.1	0.7	chr21	33913007	33913180	(12796803)	+	MIRc	SINE/MIR	2	192	(76)	2405808
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
13	10.7	3.1	3.0	chr21	38990198	38990229	(7719754)	+	GA-rich	Low_complexity	1	33	(0)	2413824
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
8237	6.9	1.8	2.0	chr21	42948301	42949462	(3760521)	C	Harlequin-int	LTR/ERV1	(5474)	1422	263	2419609
2090	15.4	14.8	0.0	chr21	43626380	43626775	(3083208)	+	LTR24	LTR/ERV1	3	467	(0)	2420525
2137	10.0	0.3	2.3	chr21	43626868	43627166	(3082817)	C	AluSz	SINE/Alu	(14)	298	6	2420526
2168	10.7	0.0	6.4	chr21	46287710	46288036	(421947)	+	AluSq2	SINE/Alu	2	307	(6)	2423733
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
235	24.7	4.0	10.2	chr22	11881062	11881169	(38937299)	+	L2c	LINE/L2	3060	3160	(227)	2425488
209	27.4	1.9	0.0	chr22	11881185	11881235	(38937233)	+	L2c	LINE/L2	3324	3375	(12)	2425488
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
991	28.8	18.0	1.7	chr22	24972700	24973304	(25845164)	C	L2a	LINE/L2	(0)	3426	2694	2441130
1931	10.5	2.1	1.1	chr22	24973390	24973693	(25844775)	C	AluSz	SINE/Alu	(0)	312	3	2441131
676	34.1	5.5	1.1	chr22	26411005	26411283	(24407185)	+	L2c	LINE/L2	2501	2792	(627)	2444290
813	30.6	6.8	2.5	chr22	26411553	26411834	(24406634)	+	LTR16D	LTR/ERVL	140	434	(217)	2444291
342	23.5	9.7	1.0	chr22	26762973	26763075	(24055393)	C	L2b	LINE/L2	(37)	3338	3226	2445114
1110	23.4	5.6	4.9	chr22	26763322	26763690	(24054778)	C	MLT1B	LTR/ERVL-MaLR	(18)	372	1	2445115
521	27.0	15.5	1.5	chr22	27123188	27123386	(23695082)	+	MIR	SINE/MIR	31	262	(0)	2445985
2264	10.7	0.0	0.0	chr22	27123392	27123682	(23694786)	C	AluSq2	SINE/Alu	(22)	291	1	2445986
843	25.0	4.1	2.4	chr22	30731204	30731604	(20086864)	C	LTR16D2	LTR/ERVL	(60)	512	1	2453286
255	24.0	1.0	4.0	chr22	30731858	30731957	(20086511)	C	ERV3-16A3_I-int	LTR/ERVL	(162)	5064	4968	2453288
1961	12.1	3.9	0.0	chr22	31023106	31023377	(19795091)	C	AluSz	SINE/Alu	(29)	283	1	2453808
4619	10.6	0.5	1.2	chr22	31023378	31023730	(19794738)	C	MER41B	LTR/ERV1	(185)	449	97	2453806
16	7.0	3.1	3.0	chr22	32378634	32378665	(18439803)	+	(GGAGCT)n	Simple_repeat	1	33	(0)	2456833
416	26.4	7.2	1.5	chr22	32972150	32972397	(17846071)	+	L1ME4b	LINE/L1	353	655	(237)	2458095
577	31.6	2.2	2.2	chr22	32972457	32972637	(17845831)	+	LTR33B	LTR/ERVL	31	211	(292)	2458097
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
5900	24.8	10.0	6.8	chr22	34674246	34675580	(16142888)	+	ERV3-16A3_I-int	LTR/ERVL	3875	5226	(0)	2461462
469	30.7	18.4	7.4	chr22	34675581	34675939	(16142529)	+	ERV3-16A3_LTR	LTR/ERVL	1	400	(22)	2461462
202	18.6	0.9	2.4	chr22	38828609	38828659	(11989809)	+	MIRc	SINE/MIR	117	166	(96)	2470358
214	27.3	1.1	4.3	chr22	38828684	38828775	(11989693)	C	L2b	LINE/L2	(40)	3335	3247	2470359
409	28.9	11.3	1.0	chr22	38829040	38829250	(11989218)	+	MIRb	SINE/MIR	1	241	(21)	2470360
2654	6.4	0.0	0.0	chr22	40668419	40668729	(10149739)	+	AluSq2	SINE/Alu	1	311	(2)	2474062
2058	14.6	11.7	4.3	chr22	40668730	40668953	(10149515)	+	MSTA	LTR/ERVL-MaLR	198	428	(0)	2474061
485	29.3	1.0	8.1	chr22	40668960	40669107	(10149361)	C	MLT1L	LTR/ERVL-MaLR	(261)	349	211	2474063
1134	30.4	6.4	3.3	chr22	40669108	40669655	(10148813)	C	LTR16E2	LTR/ERVL	(0)	568	3	2474064
2396	9.5	0.0	0.0	chr22	44498601	44498906	(6319562)	C	AluSx	SINE/Alu	(6)	306	1	2482061
651	34.8	4.5	6.3	chr22	47214028	47214500	(3603968)	+	MLT1O	LTR/ERVL-MaLR	71	534	(8)	2486535
2590	6.3	0.0	1.6	chr3	7167688	7168003	(191127556)	+	AluY	SINE/Alu	1	311	(0)	2503357
213	26.2	0.0	0.0	chr3	7168188	7168229	(191127330)	+	MIRb	SINE/MIR	208	249	(19)	2503358
1559	22.7	4.4	0.6	chr3	7168295	7168644	(191126915)	+	MLT1A	LTR/ERVL-MaLR	3	366	(8)	2503359
424	23.6	0.0	0.0	chr3	9952563	9952651	(188342908)	C	L3	LINE/CR1	(66)	4033	3945	2508333
848	29.3	10.4	1.8	chr3	10493051	10493668	(187801891)	C	L2a	LINE/L2	(13)	3413	2729	2509526
19	0.0	0.0	0.0	chr3	13815555	13815575	(184479984)	+	(TG)n	Simple_repeat	1	21	(0)	2515957
1406	29.9	9.9	2.1	chr3	25122792	25123461	(173172098)	C	MLT1J-int	LTR/ERVL-MaLR	(31)	1356	629	2532902
372	22.1	12.0	9.4	chr3	38528856	38529208	(159766351)	C	L1MC4	LINE/L1	(2)	8040	7687	2553173
3777	11.9	0.0	0.2	chr3	40351904	40352457	(157943102)	+	MER41B	LTR/ERV1	1	553	(81)	2555797
471	29.2	4.5	4.0	chr3	42238342	42238541	(156057018)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	362	2558773
599	23.2	10.1	1.9	chr3	42238551	42238704	(156056855)	C	MLT1N2	LTR/ERVL-MaLR	(394)	168	1	2558773
31	28.0	0.0	0.0	chr3	42497403	42497481	(155798078)	+	(CA)n	Simple_repeat	1	79	(0)	2559211
2183	12.3	6.0	0.9	chr3	42497580	42497924	(155797635)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2559212
204	32.7	8.6	10.0	chr3	43524633	43525223	(154770336)	+	L2	LINE/L2	2383	2964	(455)	2560745
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
195	30.6	0.0	0.0	chr3	53838746	53838794	(144456765)	+	L2b	LINE/L2	3324	3372	(3)	2578126
272	30.5	3.2	6.2	chr3	53838890	53839050	(144456509)	+	L2	LINE/L2	2645	2800	(619)	2578130
739	31.5	3.6	9.2	chr3	59255684	59256096	(139039463)	C	L2b	LINE/L2	(1)	3374	2986	2587249
30	0.0	0.0	0.0	chr3	63935115	63935142	(134360417)	+	(AATG)n	Simple_repeat	1	28	(0)	2594924
2292	12.1	1.0	0.0	chr3	64705053	64705358	(133590201)	+	AluSx	SINE/Alu	1	309	(3)	2596178
272	36.7	2.5	7.1	chr3	69151521	69151731	(129143828)	+	L2c	LINE/L2	3172	3372	(15)	2603567
1242	20.9	6.8	3.4	chr3	69151962	69152173	(129143386)	C	L1MB4	LINE/L1	(6)	6174	5951	2603568
1476	16.7	7.0	9.2	chr3	73693443	73693791	(124601768)	C	MLT2B3	LTR/ERVL	(211)	343	3	2611581
517	36.0	0.9	4.3	chr3	73693999	73694230	(124601329)	+	LTR16E2	LTR/ERVL	1	224	(344)	2611582
283	30.0	2.0	1.0	chr3	73694313	73694413	(124601146)	+	LTR16E2	LTR/ERVL	355	456	(112)	2611582
715	34.0	7.6	1.4	chr3	74557375	74557732	(123737827)	+	ERV3-16A3_I-int	LTR/ERVL	4534	4915	(752)	2612920
427	35.9	4.8	2.9	chr3	74557762	74557965	(123737594)	+	ERV3-16A3_I-int	LTR/ERVL	5019	5226	(0)	2612920
1484	25.9	3.7	2.3	chr3	74557976	74558370	(123737189)	+	LTR16	LTR/ERVL	38	438	(0)	2612928
1841	21.5	5.3	4.0	chr3	79490571	79490996	(118804563)	+	MER76	LTR/ERVL	1	432	(259)	2619550
1032	21.4	2.2	9.8	chr3	79491085	79491379	(118804180)	+	MER76	LTR/ERVL	420	691	(0)	2619550
15071	15.5	1.7	3.2	chr3	101423590	101424825	(96870734)	+	L1PA13	LINE/L1	18	1266	(5519)	2642990
7482	21.8	2.1	6.4	chr3	102363032	102364740	(95930819)	+	L1M2c	LINE/L1	638	2270	(4519)	2644439
6220	13.3	13.6	1.8	chr3	112036746	112037828	(86257731)	+	MER11B	LTR/ERVK	1	1232	(4)	2657295
1879	20.5	5.7	0.5	chr3	126314913	126315314	(71980245)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	38	2678400
13	12.1	0.0	3.5	chr3	126315557	126315585	(71979974)	+	G-rich	Low_complexity	1	29	(0)	2678401
57	0.0	1.9	0.0	chr3	127382893	127382944	(70912615)	+	(GT)n	Simple_repeat	1	53	(0)	2679950
351	23.9	8.7	6.9	chr3	127383183	127383384	(70912175)	C	MLT1J-int	LTR/ERVL-MaLR	(34)	1353	1148	2679951
14138	15.9	3.5	4.9	chr3	128857767	128859679	(69435880)	C	HERV3-int	LTR/ERV1	(6538)	1888	2	2682563
2833	13.0	5.8	1.5	chr3	128859680	128860156	(69435403)	C	LTR4	LTR/ERV1	(0)	596	98	2682563
1942	14.0	13.1	1.9	chr3	129752758	129753136	(68542423)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2684336
4998	16.8	12.7	3.7	chr3	133486263	133487575	(64807984)	C	MER52A	LTR/ERV1	(14)	1741	2	2689985
1019	18.9	0.0	0.0	chr3	141270904	141271062	(57024497)	C	AluJo	SINE/Alu	(25)	287	129	2702044
2575	10.6	2.5	4.4	chr3	142047184	142047636	(56247923)	+	LTR56	LTR/ERV1	1	444	(1)	2703432
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
475	25.8	4.4	3.0	chr3	149978961	149979022	(48316537)	+	L1MB3	LINE/L1	5196	5256	(890)	2714503
1919	15.2	12.0	2.3	chr3	149979023	149979406	(48316153)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	2714504
1803	16.9	4.9	2.1	chr3	160041988	160042485	(38253074)	C	MER51A	LTR/ERV1	(0)	640	1	2729173
1085	10.3	0.0	0.6	chr3	160042487	160042642	(38252917)	C	LOR1b	LTR/ERV1	(306)	155	1	2729174
3921	11.1	2.1	11.8	chr3	170913244	170913386	(27382173)	C	MER4A	LTR/ERV1	(0)	664	534	2743796
2566	5.4	0.0	0.3	chr3	170913387	170913681	(27381878)	C	AluY	SINE/Alu	(16)	295	2	2743797
1812	16.8	0.7	0.0	chr3	188100340	188100630	(10194929)	+	AluSx	SINE/Alu	14	306	(6)	2771260
588	32.7	7.5	5.6	chr3	188101184	188101523	(10194036)	+	LTR16E2	LTR/ERVL	222	568	(0)	2771261
2689	25.7	2.8	0.6	chr3	191556337	191556974	(6738585)	+	ERVL-E-int	LTR/ERVL	5016	5667	(0)	2776708
327	23.9	4.1	7.9	chr3	191556975	191557101	(6738458)	+	LTR33C	LTR/ERVL	1	122	(507)	2776708
829	32.2	4.6	5.5	chr3	191557115	191557512	(6738047)	C	MLT2F	LTR/ERVL	(163)	500	107	2776709
4132	15.6	1.7	2.9	chr3	193885762	193886306	(4409253)	+	MER50	LTR/ERV1	182	711	(23)	2780173
293	28.3	18.7	0.0	chr3	193894967	193895079	(4400480)	+	L2b	LINE/L2	3237	3375	(0)	2780190
338	20.0	3.4	0.0	chr3	195426822	195426906	(2868653)	+	MLT1D-int	LTR/ERVL-MaLR	1284	1371	(0)	2782910
1608	19.9	9.6	7.0	chr3	195426907	195427391	(2868168)	+	MLT1D	LTR/ERVL-MaLR	1	499	(6)	2782910
545	17.2	16.5	4.3	chr4	1292538	1292701	(188921854)	C	MER20	DNA/hAT-Charlie	(31)	188	1	2790079
190	38.9	3.7	1.9	chr4	3737990	3738149	(186476406)	C	L2b	LINE/L2	(564)	2855	2693	2793532
614	30.7	2.2	0.0	chr4	3741412	3741636	(186472919)	C	MLT1E2	LTR/ERVL-MaLR	(17)	610	381	2793540
311	23.8	0.0	0.0	chr4	39585853	39585915	(150628640)	C	MLT-int	LTR/ERVL-MaLR	(993)	742	680	2849944
919	26.2	11.5	3.4	chr4	48116393	48116862	(142097693)	C	LTR33	LTR/ERVL	(2)	513	1	2863307
2169	11.8	0.0	1.6	chr4	48116882	48117187	(142097368)	C	AluSz	SINE/Alu	(11)	301	1	2863308
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
1372	12.2	9.5	0.0	chr4	53210694	53210931	(137003624)	+	MER21A	LTR/ERVL	3	265	(666)	2867399
305	17.6	7.6	1.2	chr4	53210858	53210943	(137003612)	+	MER39B	LTR/ERV1	270	361	(292)	2867400
3184	15.3	3.1	3.1	chr4	53210938	53210962	(137003593)	+	MER21A	LTR/ERVL	378	400	(531)	2867399
2192	11.9	0.7	0.0	chr4	53210963	53211256	(137003299)	+	AluSc8	SINE/Alu	1	296	(15)	2867401
3992	10.3	0.4	1.1	chr4	74096175	74096724	(116117831)	C	MER41B	LTR/ERV1	(88)	546	1	2895701
350	27.5	6.8	4.0	chr4	76265284	76265510	(113949045)	+	LTR79	LTR/ERVL	276	509	(18)	2898991
305	27.4	1.2	2.3	chr4	81077804	81077889	(109136666)	+	LTR81A	LTR/Gypsy	340	424	(926)	2905636
9193	11.9	2.5	0.3	chr4	83079845	83081155	(107133400)	+	Ricksha_c	DNA/MULE-MuDR	9	1349	(699)	2908818
1007	26.2	15.1	2.1	chr4	88083879	88084303	(102130252)	C	LTR16E1	LTR/ERVL	(1)	537	48	2916513
309	32.0	10.8	6.3	chr4	121473024	121473323	(68741232)	+	MLT1I	LTR/ERVL-MaLR	9	323	(88)	2961114
1704	13.4	2.9	10.4	chr4	123207281	123207616	(67006939)	C	AluJb	SINE/Alu	(2)	310	1	2963636
2456	7.4	0.0	0.3	chr4	139831797	139832092	(50382463)	C	AluSc8	SINE/Alu	(16)	295	1	2985314
1846	30.1	12.2	3.2	chr4	142097897	142099199	(48115356)	C	L2a	LINE/L2	(75)	3351	1915	2988506
2183	31.6	7.0	3.7	chr4	155046945	155048100	(35166455)	+	ERV3-16A3_I-int	LTR/ERVL	4030	5226	(0)	3006876
363	25.7	20.8	0.0	chr4	155048274	155048453	(35166102)	+	LTR16	LTR/ERVL	215	451	(0)	3006877
4035	14.8	2.1	2.4	chr4	162244427	162245131	(27969424)	+	MER50	LTR/ERV1	1	703	(31)	3016455
9298	17.5	1.8	0.7	chr4	174060041	174061656	(16152899)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	15	3032456
674	17.1	1.7	0.0	chr4	174176212	174176320	(16038235)	+	MLT1B	LTR/ERVL-MaLR	280	390	(0)	3032603
525	27.2	3.4	5.3	chr4	174176683	174176936	(16037619)	C	MIRb	SINE/MIR	(11)	257	12	3032607
8791	12.2	5.8	5.1	chr4	175055094	175055788	(15158767)	+	L1PBa	LINE/L1	998	1850	(5013)	3033720
362	28.0	8.9	4.7	chr4	176360508	176360657	(13853898)	+	LTR67B	LTR/ERVL	14	170	(450)	3035428
244	33.6	1.5	5.2	chr4	176360578	176360712	(13853843)	+	MLT1N2	LTR/ERVL-MaLR	117	246	(316)	3035429
279	34.9	5.0	3.8	chr4	176360777	176360934	(13853621)	+	LTR67B	LTR/ERVL	416	575	(45)	3035428
2255	14.2	2.1	2.3	chr4	178669679	178670068	(11544487)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	1	3038500
486	26.7	10.9	2.8	chr4	178670069	178670158	(11544397)	C	LTR33	LTR/ERVL	(191)	324	228	3038499
890	8.9	6.9	0.8	chr4	183267034	183267156	(6947399)	C	FLAM_C	SINE/Alu	(12)	131	1	3044674
316	27.1	7.7	0.0	chr4	185705617	185705712	(4508843)	+	L2a	LINE/L2	3318	3421	(5)	3048650
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
16	26.8	2.1	6.2	chr5	1431542	1431636	(180106623)	+	G-rich	Low_complexity	1	97	(0)	3056237
10914	15.1	1.6	3.2	chr5	19555136	19561654	(161976605)	+	L1PB1	LINE/L1	1	6858	(9)	3079525
1782	17.5	9.9	4.2	chr5	32182743	32183092	(149355167)	+	MSTB1	LTR/ERVL-MaLR	55	432	(0)	3096345
2060	23.3	7.6	6.1	chr5	32183093	32183498	(149354761)	+	MLT1E1	LTR/ERVL-MaLR	225	639	(15)	3096343
3873	5.1	1.1	0.1	chr5	33436168	33436796	(148101463)	C	L1PA5	LINE/L1	(650)	5504	4873	3098342
14	14.0	4.9	2.3	chr5	38404063	38404103	(143134156)	+	(TCATCTGC)n	Simple_repeat	1	43	(0)	3106086
1299	29.1	13.7	0.7	chr5	62266513	62266958	(119271301)	+	LTR33	LTR/ERVL	1	513	(2)	3133463
2084	19.0	1.0	6.3	chr5	68006427	68006837	(113531422)	+	MLT1B	LTR/ERVL-MaLR	1	389	(1)	3141558
2033	20.7	3.0	2.2	chr5	68932389	68932789	(112605470)	C	HERVL18-int	LTR/ERVL	(5549)	498	95	3142931
1405	20.1	16.2	0.7	chr5	68932814	68933114	(112605145)	C	LTR18A	LTR/ERVL	(0)	357	1	3142932
367	19.6	0.0	0.0	chr5	68933137	68933192	(112605067)	C	Tigger3c	DNA/TcMar-Tigger	(543)	59	4	3142929
518	24.8	4.2	8.8	chr5	71945118	71945332	(109592927)	C	MIRb	SINE/MIR	(5)	263	70	3148276
431	30.9	3.3	4.3	chr5	71945586	71945771	(109592488)	C	LTR86B2	LTR/ERVL	(82)	405	222	3148277
412	23.0	9.6	0.0	chr5	72018450	72018562	(109519697)	C	MIRc	SINE/MIR	(14)	254	130	3148383
4534	10.2	0.9	0.5	chr5	76339824	76340454	(105197805)	+	MER41B	LTR/ERV1	1	634	(0)	3154839
1261	24.1	6.6	3.5	chr5	76340455	76340752	(105197507)	C	Arthur1B	DNA/hAT-Tip100	(784)	441	123	3154837
10949	11.2	2.5	0.2	chr5	80462583	80464173	(101074086)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	3161616
34	2.6	0.0	0.0	chr5	97067044	97067082	(84471177)	+	(A)n	Simple_repeat	1	39	(0)	3183527
11544	16.1	1.5	2.3	chr5	104178499	104180970	(77357289)	+	HUERS-P3-int	LTR/ERV1	22	2457	(6462)	3192393
2326	13.9	0.6	0.3	chr5	104746459	104746818	(76791441)	C	THE1B	LTR/ERVL-MaLR	(1)	363	3	3193032
300	29.1	6.6	5.9	chr5	104746819	104746837	(76791422)	+	ERV3-16A3_I-int	LTR/ERVL	5210	5226	(0)	3193028
983	25.1	8.5	1.1	chr5	104746838	104747099	(76791160)	+	LTR16B	LTR/ERVL	1	283	(180)	3193028
5447	9.5	0.3	2.6	chr5	104747107	104747871	(76790388)	+	THE1B-int	LTR/ERVL-MaLR	834	1580	(0)	3193033
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
1033	27.7	7.0	1.0	chr5	124927966	124928355	(56609904)	C	ERV3-16A3_LTR	LTR/ERVL	(7)	415	1	3219374
3863	23.7	9.3	7.9	chr5	124928356	124928656	(56609603)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	4911	3219374
229	26.6	16.9	1.4	chr5	125036152	125036296	(56501963)	C	MER5B	DNA/hAT-Charlie	(0)	178	7	3219532
903	27.9	1.4	4.4	chr5	125493056	125493280	(56044979)	+	LTR16B1	LTR/ERVL	1	218	(262)	3220114
370	23.2	0.2	0.0	chr5	125493285	125493372	(56044887)	+	ERV3-16A3_I-int	LTR/ERVL	2531	2603	(2623)	3220115
323	28.7	4.1	2.1	chr5	125493538	125493633	(56044626)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	5129	3220116
12	25.9	1.9	3.6	chr5	139269066	139269076	(42269183)	+	(TGACAA)n	Simple_repeat	1	11	(0)	3240452
2001	11.5	2.7	1.4	chr5	139269077	139269364	(42268895)	+	AluSz	SINE/Alu	1	292	(20)	3240453
12	21.6	0.0	0.0	chr5	139655515	139655546	(41882713)	+	(CTGTCC)n	Simple_repeat	1	32	(0)	3241256
15	0.0	0.0	0.0	chr5	142244160	142244176	(39294083)	+	(AT)n	Simple_repeat	1	17	(0)	3245537
225	29.1	9.8	6.0	chr5	142244321	142244336	(39293923)	C	MIR3	SINE/MIR	(48)	160	147	3245538
1766	18.7	3.9	6.5	chr5	142244337	142244737	(39293522)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3245539
582	29.7	9.8	3.7	chr5	145980279	145980747	(35557512)	C	L1ME4a	LINE/L1	(129)	5995	5625	3251645
4295	14.8	1.1	1.6	chr5	147296133	147296839	(34241420)	C	MER50	LTR/ERV1	(30)	704	1	3254005
24	27.4	3.6	2.6	chr5	150486521	150486630	(31051629)	+	(GCGG)n	Simple_repeat	1	114	(0)	3260074
716	22.5	12.5	2.8	chr5	154686481	154686710	(26851549)	+	MER102c	DNA/hAT-Charlie	70	301	(30)	3267784
12052	28.8	4.3	1.9	chr5	155696194	155700296	(25837963)	+	ERVL-E-int	LTR/ERVL	1384	5587	(80)	3269646
868	26.6	6.2	4.3	chr5	155700372	155700767	(25837492)	+	LTR41C	LTR/ERVL	1	404	(297)	3269647
656	32.5	5.8	6.8	chr5	164188796	164189251	(17349008)	+	MLT1K	LTR/ERVL-MaLR	143	593	(2)	3283667
4961	10.3	0.3	0.3	chr5	168580930	168581563	(12956696)	+	MER41B	LTR/ERV1	1	634	(0)	3290347
8690	1.8	0.8	0.0	chr5	169996875	169997834	(11540425)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3292771
270	29.3	6.5	1.7	chr5	169997863	169997980	(11540279)	+	MIRc	SINE/MIR	63	186	(82)	3292772
241	35.2	4.4	4.4	chr5	169998031	169998295	(11539964)	+	L2a	LINE/L2	3110	3356	(31)	3292773
1859	29.5	7.0	4.2	chr5	170633699	170634279	(10903980)	C	L2a	LINE/L2	(421)	2998	2406	3294003
769	13.2	9.3	5.7	chr5	176456372	176456547	(5081712)	+	L1MC	LINE/L1	5262	5444	(2341)	3305299
511	14.7	2.6	0.0	chr5	176456554	176456628	(5081631)	C	AluJo	SINE/Alu	(235)	77	1	3305300
244	27.4	8.6	2.3	chr5	176456640	176456770	(5081489)	C	L1M5	LINE/L1	(1333)	4813	4674	3305301
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
462	5.5	0.0	0.0	chr6	685874	685928	(170120051)	C	AluSc	SINE/Alu	(10)	299	245	3315102
2305	6.6	3.1	0.7	chr6	685976	686261	(170119718)	C	AluSc5	SINE/Alu	(16)	293	1	3315103
1927	16.0	5.6	0.5	chr6	3543233	3543602	(167262377)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3319060
1869	17.9	0.0	0.0	chr6	5059059	5059360	(165746619)	+	AluJo	SINE/Alu	1	302	(10)	3321444
484	31.2	8.5	4.8	chr6	5059361	5059500	(165746479)	C	L1ME4b	LINE/L1	(172)	720	576	3321443
2330	7.7	0.3	0.7	chr6	10638265	10638551	(160167428)	C	AluSx1	SINE/Alu	(26)	286	1	3329896
305	13.7	16.1	0.0	chr6	10638575	10638647	(160167332)	C	LTR41C	LTR/ERVL	(592)	109	23	3329897
430	15.6	11.8	0.0	chr6	10638637	10638726	(160167253)	C	LTR41C	LTR/ERVL	(599)	102	1	3329898
330	29.4	0.8	0.8	chr6	14310558	14310677	(156495302)	+	L2a	LINE/L2	3305	3424	(2)	3335776
4064	18.1	6.4	4.4	chr6	17050356	17051199	(153754780)	+	MER21B	LTR/ERVL	2	863	(5)	3340467
7032	12.3	5.2	5.4	chr6	17051351	17051995	(153753984)	+	Tigger3b	DNA/TcMar-Tigger	1	647	(584)	3340468
3968	12.7	1.7	1.9	chr6	19690161	19690795	(151115184)	+	MER41B	LTR/ERV1	1	634	(0)	3344777
4663	13.7	0.0	0.2	chr6	25954377	25955011	(144850968)	C	MER41B	LTR/ERV1	(0)	634	1	3354367
2602	9.1	0.0	0.0	chr6	27153045	27153351	(143652628)	+	AluSg	SINE/Alu	1	307	(3)	3356383
375	28.1	9.1	5.9	chr6	27153352	27153394	(143652585)	C	LTR33	LTR/ERVL	(473)	42	1	3356382
17	22.9	5.9	0.0	chr6	30908441	30908491	(139897488)	+	GA-rich	Low_complexity	1	54	(0)	3362483
216	32.8	0.0	0.0	chr6	33730714	33730771	(137075208)	C	MIR3	SINE/MIR	(87)	121	64	3367038
642	21.1	3.6	0.0	chr6	35127878	35128010	(135677969)	+	LTR41	LTR/ERVL	1	138	(630)	3369758
1970	21.5	3.9	5.2	chr6	35128013	35128576	(135677403)	C	MLT1E1A	LTR/ERVL-MaLR	(4)	676	1	3369759
570	29.6	15.0	1.1	chr6	37715880	37716147	(133089832)	C	MLT1N2	LTR/ERVL-MaLR	(256)	306	1	3375194
1041	31.6	10.4	4.1	chr6	37716148	37716718	(133089261)	C	ERVL-E-int	LTR/ERVL	(0)	5667	5073	3375197
463	30.8	9.5	6.2	chr6	45708409	45709039	(125096940)	C	L2b	LINE/L2	(12)	3363	2718	3389038
7381	9.2	1.7	0.8	chr6	73976863	73977319	(96828660)	C	L1P2	LINE/L1	(3819)	2327	1878	3424462
736	8.3	0.0	4.4	chr6	73977320	73977432	(96828547)	+	L1PA8	LINE/L1	6063	6170	(2)	3424464
266	26.3	4.0	5.9	chr6	73977487	73977587	(96828392)	+	MER94	DNA/hAT-Blackjack	36	134	(0)	3424465
231	21.4	3.5	0.0	chr6	75819530	75819585	(94986394)	C	Charlie9	DNA/hAT-Charlie	(0)	2757	2700	3426890
2038	11.5	12.3	0.0	chr6	83867684	83867996	(86937983)	+	LTR18A	LTR/ERVL	1	357	(0)	3437088
508	21.0	5.3	1.4	chr6	89128914	89129058	(81676921)	+	L1MC5a	LINE/L1	8704	8854	(450)	3444233
358	19.6	13.4	1.0	chr6	89129261	89129358	(81676621)	+	L1ME3	LINE/L1	5781	5892	(270)	3444238
742	16.9	0.7	4.2	chr6	89129359	89129500	(81676479)	+	AluJo	SINE/Alu	158	294	(18)	3444239
5969	22.8	8.9	4.7	chr6	108241505	108242562	(62563417)	+	L1M4a2	LINE/L1	738	1886	(770)	3470218
1270	22.0	6.1	2.6	chr6	108242563	108243062	(62562917)	+	MLT1E1A	LTR/ERVL-MaLR	2	602	(51)	3470222
366	22.3	2.1	1.1	chr6	109362277	109362371	(61443608)	+	LTR41	LTR/ERVL	1	96	(662)	3472044
434	19.3	19.1	4.2	chr6	109362389	109362507	(61443472)	+	L1MEc	LINE/L1	496	636	(5764)	3472045
206	36.2	11.7	5.6	chr6	112322269	112323234	(58482745)	+	L2	LINE/L2	1178	2210	(1209)	3476961
984	27.6	19.7	0.7	chr6	116757777	116758326	(54047653)	C	L2	LINE/L2	(1322)	2097	1418	3483054
390	24.5	5.4	4.1	chr6	116758332	116758476	(54047503)	C	L1ME4b	LINE/L1	(745)	147	1	3483061
797	29.3	6.0	3.5	chr6	118693548	118693890	(52112089)	C	MLT1N2	LTR/ERVL-MaLR	(22)	540	189	3485525
417	19.8	4.7	3.8	chr6	118694166	118694270	(52111709)	C	MLT1N2-int	LTR/ERVL-MaLR	(47)	1340	1235	3485525
1841	15.7	13.8	0.0	chr6	118936420	118936788	(51869191)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	5	3485883
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
1516	18.0	5.0	2.4	chr6	125008269	125008390	(45797589)	C	MER44A	DNA/TcMar-Tigger	(211)	128	1	3493705
16	0.0	0.0	0.0	chr6	125008739	125008756	(45797223)	+	(T)n	Simple_repeat	1	18	(0)	3493707
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
12	16.1	0.0	3.3	chr6	125791095	125791124	(45014855)	+	(CGC)n	Simple_repeat	1	30	(0)	3494828
1457	32.6	10.8	6.9	chr6	125957963	125958651	(44847328)	C	L2c	LINE/L2	(67)	3320	2604	3495079
11	28.1	0.0	5.3	chr6	127343105	127343161	(43462818)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	3496758
47	2.3	0.0	0.0	chr6	131534078	131534122	(39271857)	+	(TG)n	Simple_repeat	1	45	(0)	3502483
1645	30.6	4.1	2.9	chr6	135800510	135801136	(35004843)	C	MLT2F	LTR/ERVL	(2)	661	27	3508961
7753	23.7	5.3	2.2	chr6	135801155	135803032	(35002947)	C	ERVL-E-int	LTR/ERVL	(0)	5667	3728	3508961
6844	22.4	8.7	5.3	chr6	138418236	138420425	(32385554)	+	ERV3-16A3_I-int	LTR/ERVL	2955	5226	(0)	3512931
864	24.3	11.2	16.2	chr6	138420428	138420870	(32385109)	+	ERV3-16A3_LTR	LTR/ERVL	3	420	(2)	3512931
1486	27.9	11.7	2.4	chr6	141550713	141551596	(29254383)	C	L1MB7	LINE/L1	(3998)	3024	2048	3517399
517	27.5	5.1	3.5	chr6	141551648	141551937	(29254042)	C	L1MB7	LINE/L1	(5450)	1678	1384	3517399
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
4090	9.4	0.4	0.0	chr6	143739913	143740464	(27065515)	C	MER41A	LTR/ERV1	(0)	554	1	3520354
2231	11.0	0.3	0.0	chr6	149328300	149328591	(21477388)	C	AluSc8	SINE/Alu	(18)	293	1	3528264
275	35.0	9.2	14.0	chr6	149328619	149328997	(21476982)	C	L2c	LINE/L2	(6)	3381	3023	3528265
1343	20.6	6.5	2.9	chr6	149336875	149337288	(21468691)	+	Charlie4a	DNA/hAT-Charlie	14	443	(65)	3528282
21	13.2	0.0	0.0	chr6	151154610	151154642	(19651337)	+	(T)n	Simple_repeat	1	33	(0)	3531431
666	23.6	0.6	1.3	chr6	154635843	154636001	(16169978)	C	L1ME3	LINE/L1	(0)	6162	6005	3536747
268	17.2	11.1	3.7	chr6	154636044	154636150	(16169829)	+	L1ME4a	LINE/L1	6024	6124	(0)	3536748
1462	13.7	12.5	4.5	chr6	154636234	154636334	(16169645)	+	MLT1A0	LTR/ERVL-MaLR	6	99	(266)	3536749
2464	9.9	0.0	0.0	chr6	154636335	154636626	(16169353)	+	AluSx1	SINE/Alu	1	292	(20)	3536750
3846	19.9	7.9	1.0	chr6	167742882	167743776	(3062203)	+	ERVL-int	LTR/ERVL	4795	5756	(1)	3554724
694	30.0	8.6	1.6	chr6	167743777	167744145	(3061834)	+	MLT2C1	LTR/ERVL	1	397	(0)	3554724
735	26.8	13.3	5.0	chr6	168627823	168628226	(2177753)	+	MER65A	LTR/ERV1	3	445	(0)	3555647
569	28.7	9.4	10.4	chr7	17489266	17489716	(141856257)	+	MLT1J	LTR/ERVL-MaLR	29	474	(38)	3583968
2457	7.0	1.0	3.8	chr7	21944158	21944471	(137401502)	+	AluSq2	SINE/Alu	2	306	(7)	3589933
565	31.1	8.7	4.9	chr7	26729232	26729989	(132615984)	+	L1M6	LINE/L1	790	1579	(4917)	3597459
32	36.8	1.1	2.1	chr7	32495286	32495475	(126850498)	+	(GCCCC)n	Simple_repeat	1	192	(0)	3606331
4353	11.5	3.5	2.9	chr7	35028567	35029195	(124316778)	C	MER41B	LTR/ERV1	(0)	634	2	3610082
1392	16.2	0.8	2.5	chr7	39638507	39638746	(119707227)	C	AluJb	SINE/Alu	(76)	236	1	3616854
1907	20.1	2.1	4.4	chr7	39638747	39639035	(119706938)	C	L1MB8	LINE/L1	(404)	5774	5490	3616853
1902	27.4	6.7	5.7	chr7	44182013	44182852	(115163121)	+	HERVL-int	LTR/ERVL	4378	5226	(0)	3623923
998	26.2	10.3	1.4	chr7	44182853	44183267	(115162706)	+	LTR16A1	LTR/ERVL	1	456	(0)	3623923
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1424	31.8	6.2	7.5	chr7	94076225	94076759	(65269214)	+	ERV3-16A3_I-int	LTR/ERVL	4706	5226	(0)	3696124
975	27.4	13.6	4.3	chr7	94076760	94077152	(65268821)	+	LTR16	LTR/ERVL	1	435	(3)	3696124
710	33.8	2.0	6.9	chr7	101582921	101583339	(57762634)	+	ERVL-E-int	LTR/ERVL	4864	5261	(406)	3709161
1532	28.6	3.7	1.3	chr7	101583480	101584003	(57761970)	+	LTR16E1	LTR/ERVL	1	537	(1)	3709166
404	24.6	11.0	2.1	chr7	102572183	102572323	(56773650)	+	MIRb	SINE/MIR	19	173	(95)	3711319
7984	18.2	1.2	0.9	chr7	111796380	111798534	(47547439)	+	HUERS-P3-int	LTR/ERV1	822	3284	(5635)	3724857
1650	16.8	7.7	2.7	chr7	127765963	127766345	(31579628)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3746202
38	28.4	3.2	1.8	chr7	130531053	130531210	(28814763)	+	G-rich	Low_complexity	1	163	(0)	3751279
20	21.9	4.4	5.8	chr7	130535626	130535753	(28810220)	+	G-rich	Low_complexity	1	126	(0)	3751280
13	27.3	2.8	4.1	chr7	130540022	130540092	(28805881)	+	(GTTGG)n	Simple_repeat	1	73	(0)	3751282
847	24.0	0.0	4.3	chr7	131896921	131897107	(27448866)	C	MER41C	LTR/ERV1	(25)	496	318	3753644
19	0.0	0.0	0.0	chr7	131897108	131897128	(27448845)	+	(T)n	Simple_repeat	1	21	(0)	3753645
469	23.1	12.6	3.6	chr7	134285475	134285698	(25060275)	+	ERVL-E-int	LTR/ERVL	5383	5629	(38)	3757223
606	23.0	7.5	0.6	chr7	134285720	134285894	(25060079)	+	LTR33B	LTR/ERVL	1	188	(315)	3757224
18	17.9	3.7	3.6	chr7	134947691	134947744	(24398229)	+	GA-rich	Low_complexity	1	56	(0)	3758281
2353	23.3	4.6	3.6	chr7	134998193	134998856	(24347117)	C	MER21-int	LTR/ERVL	(58)	4133	3463	3758361
3240	25.1	4.6	6.2	chr7	134998881	135000000	(24345973)	C	MER21-int	LTR/ERVL	(800)	3391	2290	3758361
49	3.8	0.0	0.0	chr7	138718573	138718626	(20627347)	+	(GAGGAATGGG)n	Simple_repeat	1	54	(0)	3764170
1924	16.0	0.0	0.3	chr7	138718903	138719189	(20626784)	+	AluJb	SINE/Alu	1	286	(26)	3764171
321	24.3	5.3	0.9	chr7	139898239	139898346	(19447627)	C	L3	LINE/CR1	(2271)	1828	1716	3766383
672	21.1	0.7	4.5	chr7	145511333	145511486	(13834487)	C	LTR41C	LTR/ERVL	(553)	148	1	3774716
455	26.2	0.8	0.8	chr7	146635520	146635642	(12710331)	+	MamTip3	DNA/hAT-Tip100	65	187	(313)	3776186
442	29.0	4.0	5.1	chr7	146635722	146635899	(12710074)	+	MamTip3	DNA/hAT-Tip100	322	497	(3)	3776187
3896	24.1	4.6	2.4	chr7	149509823	149510621	(9835352)	+	L1MA4	LINE/L1	2203	3025	(4540)	3780796
280	23.7	1.3	5.0	chr7	150343809	150343888	(9002085)	+	Helitron3Na_Mam	RC/Helitron	123	199	(287)	3781901
312	25.0	1.2	7.0	chr7	150343931	150344016	(9001957)	+	Helitron3Na_Mam	RC/Helitron	382	462	(24)	3781901
2527	16.3	6.3	0.2	chr7	150344023	150344586	(9001387)	C	Charlie5	DNA/hAT-Charlie	(312)	2312	1712	3781902
2244	22.0	6.5	9.3	chr7	151311096	151311804	(8034169)	C	LTR41	LTR/ERVL	(75)	693	1	3783223
2697	20.0	10.8	1.6	chr7	151311805	151312096	(8033877)	+	Arthur1	DNA/hAT-Tip100	3529	3865	(82)	3783222
16	0.0	0.0	0.0	chr7	151517691	151517708	(7828265)	+	(A)n	Simple_repeat	1	18	(0)	3783575
890	20.4	1.6	0.0	chr7	157001016	157001196	(2344777)	C	AluJo	SINE/Alu	(7)	305	122	3791694
2616	18.8	5.5	3.8	chr7	157001197	157001490	(2344483)	C	L1MB2	LINE/L1	(278)	5893	5609	3791693
28	0.0	0.0	0.0	chr7	157001491	157001517	(2344456)	+	(T)n	Simple_repeat	1	27	(0)	3791695
1802	30.3	8.4	2.8	chr7	157934739	157935695	(1410278)	C	L1MEf	LINE/L1	(4553)	1647	633	3792862
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1557	20.3	2.7	3.2	chr8	9544115	9544455	(135594181)	C	MLT2C1	LTR/ERVL	(58)	339	1	3806695
16278	18.4	3.4	2.3	chr8	9544456	9546196	(135592440)	C	ERVL-B4-int	LTR/ERVL	(1)	5713	3934	3806695
1195	25.4	9.4	3.4	chr8	26060078	26060488	(119078148)	C	LTR16	LTR/ERVL	(0)	438	1	3832000
9372	26.6	6.7	6.3	chr8	26060489	26060697	(119077939)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	5002	3832000
2052	11.6	1.4	0.0	chr8	26060698	26060973	(119077663)	+	AluSq2	SINE/Alu	26	305	(8)	3832001
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
614	27.2	3.2	5.3	chr8	81686779	81686823	(63451813)	C	MIRb	SINE/MIR	(11)	257	218	3909617
2232	9.9	3.0	0.0	chr8	81686824	81687117	(63451519)	C	AluSq2	SINE/Alu	(10)	303	1	3909618
1642	18.5	0.0	3.3	chr8	86225640	86225915	(58912721)	+	AluJb	SINE/Alu	1	267	(45)	3915720
47	0.0	0.0	0.0	chr8	95268752	95268794	(49869842)	+	(GGGCG)n	Simple_repeat	1	43	(0)	3928506
4178	11.7	0.3	8.7	chr8	97762639	97763208	(47375428)	+	MER41B	LTR/ERV1	1	515	(119)	3932380
1611	11.8	3.0	0.0	chr8	97763209	97763437	(47375199)	C	AluSz	SINE/Alu	(76)	236	1	3932381
617	26.4	7.4	7.8	chr8	102034055	102034477	(43104159)	+	ERVL-E-int	LTR/ERVL	5247	5667	(0)	3939680
288	31.4	7.9	2.1	chr8	102034563	102034705	(43103931)	+	LTR33A	LTR/ERVL	78	229	(291)	3939684
386	35.6	4.2	4.2	chr8	133919947	133920163	(11218473)	+	MLT1K-int	LTR/ERVL-MaLR	1131	1347	(40)	3991462
687	23.7	33.5	2.3	chr8	133920395	133920738	(11217898)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	37	3991463
1736	32.4	12.2	3.8	chr8	142262894	142264898	(2873738)	C	L1MEd	LINE/L1	(1797)	4349	2135	4004721
248	37.5	1.5	0.0	chr8	143345979	143346106	(1792530)	+	L1ME1	LINE/L1	6043	6172	(7)	4006103
1078	14.0	0.2	0.5	chr8	143669231	143669438	(1469198)	C	LTR10B1	LTR/ERV1	(55)	492	240	4006487
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
1174	29.4	8.1	0.2	chr9	1676311	1676722	(136717995)	C	LTR16A	LTR/ERVL	(4)	447	1	4011076
1239	28.1	2.7	2.1	chr9	1676723	1677158	(136717559)	C	ERV3-16A3_I-int	LTR/ERVL	(0)	5226	4788	4011076
1996	17.1	0.7	1.3	chr9	6353617	6353914	(132040803)	+	AluJo	SINE/Alu	3	298	(14)	4017889
1247	34.6	12.3	2.6	chr9	32624996	32626732	(105767985)	+	L2b	LINE/L2	1385	3351	(24)	4053959
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
186	24.4	0.0	0.0	chr9	70418275	70418315	(67976402)	C	MER5A	DNA/hAT-Charlie	(52)	137	97	4083111
226	15.6	4.3	4.3	chr9	70418361	70418407	(67976310)	C	MER5A	DNA/hAT-Charlie	(30)	159	113	4083112
375	33.3	8.0	2.4	chr9	73936294	73936505	(64458212)	+	MIRb	SINE/MIR	22	246	(22)	4088727
963	31.5	9.5	7.1	chr9	81147370	81147831	(57246886)	C	LTR33A	LTR/ERVL	(46)	474	1	4099473
16	16.9	0.0	0.0	chr9	81147869	81147901	(57246816)	+	(TTTA)n	Simple_repeat	1	33	(0)	4099474
2325	17.0	11.0	5.3	chr9	97524538	97525021	(40869696)	C	MLT2B4	LTR/ERVL	(36)	520	2	4124646
7038	12.3	2.7	2.8	chr9	97525022	97526188	(40868529)	C	ERVL-B4-int	LTR/ERVL	(1)	5713	4548	4124646
258	30.9	7.3	5.4	chr9	105107240	105107386	(33287331)	+	MLT1K-int	LTR/ERVL-MaLR	1194	1343	(44)	4136902
346	31.2	9.9	2.5	chr9	105107566	105107723	(33286994)	+	MLT1K	LTR/ERVL-MaLR	152	322	(273)	4136902
250	27.2	1.2	2.4	chr9	109370015	109370097	(29024620)	+	LTR67B	LTR/ERVL	66	147	(473)	4144381
478	27.0	4.5	8.2	chr9	109370033	109370110	(29024607)	+	MLT1N2	LTR/ERVL-MaLR	104	182	(380)	4144382
653	13.6	3.9	11.4	chr9	109370111	109370250	(29024467)	C	FLAM_C	SINE/Alu	(14)	129	1	4144383
478	27.0	4.5	8.2	chr9	109370251	109370377	(29024340)	+	MLT1N2	LTR/ERVL-MaLR	183	301	(261)	4144382
26	20.9	0.0	0.0	chr9	125189733	125189788	(13204929)	+	(GCG)n	Simple_repeat	1	56	(0)	4174090
329	31.4	2.8	4.1	chr9	127544872	127545017	(10849700)	C	MIR3	SINE/MIR	(1)	207	64	4178454
219	33.9	7.4	3.4	chr9	127545127	127545450	(10849267)	+	L2b	LINE/L2	3035	3372	(3)	4178455
1114	28.9	3.0	4.0	chr9	129572708	129573151	(8821566)	+	LTR16E2	LTR/ERVL	1	439	(129)	4183161
415	14.0	0.0	2.3	chr9	134532502	134532589	(3862128)	C	L1MB8	LINE/L1	(0)	6178	6093	4192138
1833	26.3	4.1	5.2	chr9	134532603	134532635	(3862082)	C	L1MB4	LINE/L1	(6)	6174	6147	4192139
1787	17.0	1.0	1.6	chr9	134532636	134532946	(3861771)	+	AluJo	SINE/Alu	1	309	(3)	4192140
4297	10.8	2.5	1.6	chrX	6385235	6385862	(149655033)	C	MER41B	LTR/ERV1	(0)	634	1	4370041
372	20.2	4.4	14.2	chrX	15257984	15258110	(140782785)	+	MLT1H	LTR/ERVL-MaLR	353	526	(23)	4384049
186	29.6	0.0	0.0	chrX	15258135	15258188	(140782707)	C	MIRb	SINE/MIR	(100)	168	115	4384050
314	28.6	17.2	0.7	chrX	20464894	20465034	(135575861)	C	MER91A	DNA/hAT-Tip100	(8)	188	20	4393216
572	31.5	11.8	4.9	chrX	20465084	20465577	(135575318)	+	MLT1H	LTR/ERVL-MaLR	1	533	(16)	4393217
4698	10.5	1.0	0.0	chrX	44485099	44485717	(111555178)	C	MER41B	LTR/ERV1	(0)	634	10	4428965
27	23.9	3.3	1.1	chrX	48466633	48466722	(107574173)	+	G-rich	Low_complexity	1	93	(0)	4436133
1870	16.8	7.8	19.5	chrX	53481742	53482414	(102558481)	C	LTR41	LTR/ERVL	(180)	588	1	4443873
746	16.1	0.0	0.0	chrX	53482485	53482596	(102558299)	+	AluJr4	SINE/Alu	184	295	(17)	4443874
8720	27.2	6.1	4.3	chrX	53482608	53483124	(102557771)	C	ERVL-int	LTR/ERVL	(82)	5675	5166	4443875
814	25.0	1.1	1.6	chrX	72041330	72041520	(83999375)	C	MER102a	DNA/hAT-Charlie	(66)	264	75	4462586
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
512	35.0	6.3	7.2	chrX	103601960	103602442	(52438453)	C	L1ME3D	LINE/L1	(5614)	628	160	4498865
383	25.3	1.1	0.0	chrX	110023969	110024055	(46016840)	+	MIR3	SINE/MIR	96	183	(25)	4507792
10034	21.7	4.1	4.9	chrX	123509902	123512665	(32528230)	+	ERV3-16A3_I-int	LTR/ERVL	2487	5226	(0)	4526860
1197	28.9	4.7	1.5	chrX	123512666	123513073	(32527822)	+	ERV3-16A3_LTR	LTR/ERVL	1	419	(19)	4526860
10764	12.6	0.9	0.4	chrX	125645982	125647604	(30393291)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	4530331
1232	31.4	12.7	1.8	chrX	150349230	150349732	(5691163)	C	LTR16E2	LTR/ERVL	(2)	566	1	4565781
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157