2020	10.8	2.2	0.0	chr1	1383064	1383332	(247573090)	+	AluSx1	SINE/Alu	1	275	(37)	1655
778	25.4	10.3	7.5	chr1	1383333	1383347	(247573075)	+	MER66C	LTR/ERV1	445	450	(105)	1654
847	23.0	0.6	2.3	chr1	1383348	1383521	(247572901)	+	AluSg4	SINE/Alu	135	305	(5)	1656
778	25.4	10.3	7.5	chr1	1383522	1383628	(247572794)	+	MER66C	LTR/ERV1	451	553	(2)	1654
1447	10.6	20.3	0.4	chr1	1383651	1383887	(247572535)	+	AluY	SINE/Alu	1	296	(15)	1657
1649	18.5	11.6	4.0	chr1	2367929	2368190	(246588232)	+	L1MEc	LINE/L1	5204	5509	(810)	3142
2359	18.8	8.9	0.5	chr1	2368191	2368634	(246587788)	C	MER66B	LTR/ERV1	(0)	486	2	3154
3169	15.4	0.0	0.8	chr1	3965487	3965976	(244990446)	+	MER66B	LTR/ERV1	1	486	(0)	4639
202	33.3	5.3	1.4	chr1	3965996	3966068	(244990354)	+	L2b	LINE/L2	3274	3349	(26)	4640
1545	25.6	6.1	1.4	chr1	3966210	3966649	(244989773)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	1	4641
2079	23.1	1.6	5.7	chr1	4305575	4306079	(244650343)	C	MER66B	LTR/ERV1	(2)	484	1	5125
227	28.2	8.6	0.0	chr1	6200028	6200112	(242756310)	+	L2b	LINE/L2	596	688	(2731)	7813
205	30.0	0.0	0.0	chr1	6200116	6200185	(242756237)	+	L2b	LINE/L2	958	1027	(2392)	7813
590	21.2	3.6	0.0	chr1	6200200	6200331	(242756091)	C	MER5A1	DNA/hAT-Charlie	(29)	137	1	7814
2973	16.5	2.5	0.4	chr1	11553390	11553865	(237402557)	C	MER66B	LTR/ERV1	(0)	486	1	17921
275	30.5	4.5	0.0	chr1	11934297	11934401	(237022021)	C	MIR	SINE/MIR	(36)	226	117	18775
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
14	21.9	2.3	2.2	chr1	11934781	11934824	(237021598)	+	(TGC)n	Simple_repeat	1	45	(0)	18777
273	28.3	13.1	0.0	chr1	11934934	11935085	(237021337)	+	MIR3	SINE/MIR	13	187	(21)	18778
185	27.5	12.5	1.1	chr1	12604654	12604745	(236351677)	+	MIRb	SINE/MIR	14	117	(151)	20069
2086	7.0	1.7	10.9	chr1	12604769	12605097	(236351325)	+	AluSc	SINE/Alu	1	298	(11)	20070
3193	15.4	2.8	0.8	chr1	15218556	15219080	(233737342)	+	MER66C	LTR/ERV1	1	536	(19)	24804
316	31.5	1.8	0.9	chr1	15219092	15219200	(233737222)	+	MIR	SINE/MIR	153	262	(0)	24803
15	12.2	0.0	0.0	chr1	15219328	15219354	(233737068)	+	(AGG)n	Simple_repeat	1	27	(0)	24805
2161	19.9	6.4	0.7	chr1	15252137	15252591	(233703831)	C	MER66B	LTR/ERV1	(3)	483	1	24868
3473	20.2	3.7	5.2	chr1	15282294	15282854	(233673568)	C	MER63C	DNA/hAT-Blackjack	(67)	863	337	24929
2940	18.3	0.0	0.4	chr1	15282855	15283342	(233673080)	C	MER66B	LTR/ERV1	(0)	486	1	24930
17	21.2	2.3	0.0	chr1	15945134	15945177	(233011245)	+	(CCT)n	Simple_repeat	1	45	(0)	26382
256	36.5	0.0	1.0	chr1	16032759	16032855	(232923567)	+	MIRc	SINE/MIR	18	113	(155)	26553
644	1.4	0.0	0.0	chr1	16545939	16546009	(232410413)	C	tRNA-Gly-GGG	tRNA	(3)	71	1	27733
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
615	4.2	0.0	0.0	chr1	16678270	16678341	(232278081)	C	tRNA-Gly-GGG	tRNA	(2)	72	1	27935
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
578	31.6	6.2	0.9	chr1	18259916	18260129	(230696293)	+	MIRb	SINE/MIR	40	265	(3)	31259
2647	16.7	0.2	4.7	chr1	18260332	18260840	(230695582)	C	MER66B	LTR/ERV1	(0)	486	1	31260
2253	14.3	0.9	2.3	chr1	18493313	18493656	(230462766)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	31775
4549	19.4	4.0	4.8	chr1	18493657	18493859	(230462563)	C	L1MC3	LINE/L1	(98)	7687	7483	31774
2702	18.0	2.9	3.7	chr1	18493860	18494117	(230462305)	C	MER66B	LTR/ERV1	(0)	486	238	31776
1861	12.6	7.8	0.0	chr1	18494118	18494387	(230462035)	+	AluSz	SINE/Alu	1	293	(19)	31777
301	26.5	1.7	4.1	chr1	20008172	20008293	(228948129)	C	LTR16B1	LTR/ERVL	(0)	463	345	34920
2337	15.4	1.7	0.5	chr1	20008299	20008695	(228947727)	C	MER66B	LTR/ERV1	(0)	486	85	34921
320	34.7	1.6	0.0	chr1	24413210	24413333	(224543089)	C	MIR3	SINE/MIR	(49)	159	34	44839
2384	7.7	0.0	0.7	chr1	24414048	24414345	(224542077)	C	AluSx1	SINE/Alu	(16)	296	1	44840
21	4.0	0.0	0.0	chr1	24736309	24736334	(224220088)	+	(AG)n	Simple_repeat	1	26	(0)	45612
18	30.9	1.9	0.0	chr1	24736334	24736385	(224220037)	+	(GT)n	Simple_repeat	1	53	(0)	45613
227	40.0	0.0	0.0	chr1	24736432	24736506	(224219916)	+	MIR3	SINE/MIR	16	90	(118)	45614
27	24.1	5.0	1.0	chr1	27603753	27603859	(221352563)	+	(CTCT)n	Simple_repeat	1	111	(0)	52102
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
2542	7.7	0.0	0.6	chr1	27830195	27830507	(221125915)	C	AluSz	SINE/Alu	(0)	312	2	52639
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
247	29.4	0.9	7.6	chr1	27915331	27915354	(221041068)	C	L2b	LINE/L2	(0)	3375	3354	52827
1679	15.8	2.0	1.7	chr1	27915355	27915651	(221040771)	+	AluJr	SINE/Alu	4	301	(11)	52828
13	7.5	7.1	0.0	chr1	28737394	28737421	(220219001)	+	(TTCC)n	Simple_repeat	1	30	(0)	55024
384	22.9	10.9	1.6	chr1	28914017	28914140	(220042282)	C	MIR3	SINE/MIR	(11)	197	61	55497
13	8.9	0.0	3.9	chr1	28914599	28914624	(220041798)	+	(TCGC)n	Simple_repeat	1	26	(0)	55498
16	32.2	1.2	2.5	chr1	28914778	28914857	(220041565)	+	(GGC)n	Simple_repeat	1	81	(0)	55499
694	29.7	1.4	0.8	chr1	30106048	30106267	(218850155)	C	MIRb	SINE/MIR	(11)	257	32	57854
460	24.9	4.0	5.8	chr1	30106404	30106561	(218849861)	+	MIR	SINE/MIR	51	211	(19)	57855
2972	15.5	2.9	0.4	chr1	30304801	30305274	(218651148)	+	MER66B	LTR/ERV1	1	486	(0)	58199
293	24.6	0.0	0.0	chr1	30305297	30305361	(218651061)	+	MER66-int	LTR/ERV1	85	149	(6527)	58199
9168	26.2	6.8	6.7	chr1	30305360	30309176	(218647246)	+	MER66-int	LTR/ERV1	53	3874	(2802)	58199
965	32.0	8.5	0.5	chr1	30338171	30338537	(218617885)	C	L2a	LINE/L2	(0)	3426	3028	58254
324	19.8	0.7	0.0	chr1	30338540	30339159	(218617263)	+	(ATGATG)n	Simple_repeat	1	624	(0)	58255
197	23.5	6.9	2.4	chr1	31811550	31811632	(217144790)	C	MIRb	SINE/MIR	(160)	108	22	61358
676	32.9	3.8	1.3	chr1	31812078	31812311	(217144111)	C	MIRb	SINE/MIR	(20)	248	9	61359
243	36.4	5.5	2.5	chr1	32072401	32072558	(216883864)	C	L2	LINE/L2	(706)	2713	2551	61998
529	30.5	4.3	0.0	chr1	32291425	32291601	(216664821)	+	MIRb	SINE/MIR	81	265	(3)	62537
424	26.6	2.6	0.9	chr1	32291676	32291811	(216664611)	+	MIR3	SINE/MIR	37	170	(38)	62538
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
322	23.7	17.9	3.1	chr1	32292859	32293019	(216663403)	C	L2c	LINE/L2	(178)	3209	3020	62540
2159	12.8	0.3	0.3	chr1	32350296	32350600	(216605822)	C	AluSz6	SINE/Alu	(7)	305	1	62684
2140	25.5	7.9	17.1	chr1	32395125	32395608	(216560814)	+	L2a	LINE/L2	1636	2052	(1367)	62773
3146	12.1	1.4	4.4	chr1	34937703	34938203	(214018219)	+	MER66B	LTR/ERV1	1	486	(0)	67705
2021	21.6	3.9	3.5	chr1	34938204	34938439	(214017983)	+	MLT1F	LTR/ERVL-MaLR	285	520	(28)	67704
15	9.1	0.0	0.0	chr1	35557306	35557329	(213399093)	+	(GGA)n	Simple_repeat	1	24	(0)	68976
846	23.5	7.3	7.3	chr1	35768884	35769241	(213187181)	C	MER96B	DNA/hAT-Tip100	(57)	360	3	69414
16	8.2	0.0	0.0	chr1	37808747	37808772	(211147650)	+	(TGGGG)n	Simple_repeat	1	26	(0)	73489
2510	7.2	0.0	0.0	chr1	37935785	37936088	(211020334)	+	AluY	SINE/Alu	1	304	(7)	73753
200	32.3	10.6	2.6	chr1	37936153	37936338	(211020084)	+	L2c	LINE/L2	2910	3116	(271)	73748
2000	10.8	0.0	0.0	chr1	37936339	37936598	(211019824)	+	AluSx1	SINE/Alu	1	260	(52)	73754
629	33.7	1.1	3.0	chr1	40119514	40119671	(208836751)	+	L2a	LINE/L2	2881	3038	(381)	78136
2623	16.4	2.7	5.7	chr1	40119672	40119989	(208836433)	C	MER66A	LTR/ERV1	(0)	478	163	78137
189	22.2	0.0	2.2	chr1	42957628	42957673	(205998749)	+	L2a	LINE/L2	3373	3417	(9)	83429
17	10.1	3.1	0.0	chr1	42958185	42958216	(205998206)	+	(GCCGGG)n	Simple_repeat	1	33	(0)	83430
1798	17.8	0.0	0.0	chr1	46333994	46334274	(202622148)	+	AluJo	SINE/Alu	11	291	(21)	89823
2363	15.8	12.0	4.6	chr1	46334275	46334379	(202622043)	+	MER66C	LTR/ERV1	439	540	(15)	89807
1110	17.8	4.8	12.9	chr1	46334381	46334599	(202621823)	+	MER65A	LTR/ERV1	133	314	(131)	89824
2223	8.8	3.1	0.3	chr1	46622861	46623145	(202333277)	C	AluSx	SINE/Alu	(19)	293	1	90364
16	24.5	0.0	0.0	chr1	46718973	46719016	(202237406)	+	(CTCCGG)n	Simple_repeat	1	44	(0)	90530
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
203	24.4	15.3	1.9	chr1	47507569	47507677	(201448745)	C	MIR	SINE/MIR	(3)	259	127	91743
221	19.3	6.6	9.5	chr1	47507684	47507746	(201448676)	C	MIR3	SINE/MIR	(130)	78	18	91744
26	18.6	3.1	6.1	chr1	47508214	47508309	(201448113)	+	G-rich	Low_complexity	1	99	(0)	91745
3026	15.5	0.2	0.6	chr1	50607882	50608369	(198348053)	C	MER66B	LTR/ERV1	(0)	486	1	97124
1112	21.6	9.6	2.3	chr1	50873507	50873904	(198082518)	+	MER66A	LTR/ERV1	65	520	(34)	97559
254	15.8	5.0	1.7	chr1	50874008	50874065	(198082357)	C	MER66C	LTR/ERV1	(5)	550	491	97560
1750	12.7	4.4	3.4	chr1	52002059	52002350	(196954072)	+	AluJo	SINE/Alu	1	295	(17)	99937
283	30.6	18.8	0.0	chr1	52002566	52002699	(196953723)	C	MIRb	SINE/MIR	(7)	261	97	99938
2608	5.0	0.0	0.0	chr1	52697569	52697871	(196258551)	C	AluY	SINE/Alu	(8)	303	1	101494
859	28.7	10.0	4.4	chr1	52697872	52697999	(196258423)	+	L2a	LINE/L2	3247	3371	(55)	101487
13	8.1	3.9	0.0	chr1	52698361	52698386	(196258036)	+	(GGCGG)n	Simple_repeat	1	27	(0)	101495
288	27.5	4.8	9.8	chr1	52698589	52698711	(196257711)	C	L2c	LINE/L2	(2)	3373	3242	101496
344	14.8	14.7	2.4	chr1	52937647	52937729	(196018693)	+	Charlie9	DNA/hAT-Charlie	8	102	(2655)	102130
2098	17.6	7.0	11.5	chr1	52937735	52938240	(196018182)	C	MER66D	LTR/ERV1	(0)	484	3	102131
180	26.7	1.6	3.2	chr1	53238890	53238951	(195717471)	+	MIR1_Amn	SINE/MIR	109	169	(61)	102710
220	35.9	4.9	1.7	chr1	54054150	54054268	(194902154)	C	L3	LINE/CR1	(123)	3976	3854	104308
1447	12.8	0.0	9.6	chr1	54480840	54481090	(194475332)	+	MER30	DNA/hAT-Charlie	2	228	(2)	105178
16	0.0	0.0	0.0	chr1	54489318	54489334	(194467088)	+	(A)n	Simple_repeat	1	17	(0)	105196
13	19.2	2.8	0.0	chr1	54489335	54489352	(194467070)	+	A-rich	Low_complexity	2	37	(0)	105197
1117	22.7	4.3	4.0	chr1	54774658	54774983	(194181439)	C	LTR16C	LTR/ERVL	(14)	475	149	105875
252	21.7	10.1	7.8	chr1	54775267	54775464	(194180958)	C	MLT1K	LTR/ERVL-MaLR	(401)	194	1	105876
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
2364	6.0	0.3	3.0	chr1	58700274	58700573	(190255849)	C	AluSq2	SINE/Alu	(19)	294	3	113339
465	34.9	3.6	1.9	chr1	58844792	58845007	(190111415)	+	MIRb	SINE/MIR	38	257	(11)	113643
1426	17.1	9.9	5.2	chr1	58845015	58845341	(190111081)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	113644
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
209	23.1	1.4	0.0	chr1	60871505	60871561	(188084861)	C	L2a	LINE/L2	(1)	3425	3326	117256
430	29.5	3.2	5.1	chr1	60871639	60871795	(188084627)	C	MIRb	SINE/MIR	(19)	249	96	117257
10508	13.7	1.7	1.4	chr1	60964806	60966016	(187990406)	C	THE1C-int	LTR/ERVL-MaLR	(6)	1625	406	117419
5749	20.2	0.8	0.5	chr1	61565272	61566291	(187390131)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	629	118370
798	12.1	0.8	2.2	chr1	61566276	61566410	(187390012)	C	MSTB-int	LTR/ERVL-MaLR	(1518)	133	1	118370
2360	15.7	8.9	0.3	chr1	61566411	61566799	(187389623)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	118370
2129	16.1	0.0	0.0	chr1	62713073	62713371	(186243051)	+	AluJb	SINE/Alu	1	299	(13)	120678
394	23.1	4.4	7.8	chr1	62727810	62727901	(186228521)	C	LTR81A	LTR/Gypsy	(1204)	146	56	120719
1981	19.7	9.1	6.2	chr1	62727902	62728372	(186228050)	C	MER66B	LTR/ERV1	(0)	486	1	120720
394	23.1	4.4	7.8	chr1	62728373	62728420	(186228002)	C	LTR81A	LTR/Gypsy	(1295)	55	11	120719
8440	11.9	17.2	1.3	chr1	62761340	62762661	(186193761)	+	LTR12C	LTR/ERV1	3	1579	(0)	120771
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	18.9	2.8	0.0	chr1	64745015	64745050	(184211372)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	124431
14	4.3	4.2	0.0	chr1	65309511	65309534	(183646888)	+	(CTCC)n	Simple_repeat	1	25	(0)	125553
11	18.6	0.0	7.1	chr1	65420513	65420554	(183535868)	+	G-rich	Low_complexity	1	42	(0)	125759
15	25.9	1.4	5.6	chr1	67053630	67053700	(181902722)	+	(GCCC)n	Simple_repeat	1	72	(0)	128151
27	21.7	1.5	0.0	chr1	67053742	67053806	(181902616)	+	(GCC)n	Simple_repeat	1	66	(0)	128152
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
7174	13.4	2.6	1.3	chr1	68619938	68621021	(180335401)	C	THE1D-int	LTR/ERVL-MaLR	(97)	1534	436	130906
1395	15.7	0.0	0.9	chr1	68621024	68621233	(180335189)	+	AluSx4	SINE/Alu	86	293	(17)	130907
5948	14.8	7.5	1.4	chr1	69354779	69355714	(179600708)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	233	131914
2935	17.1	0.4	0.4	chr1	69355715	69356200	(179600222)	C	MER66B	LTR/ERV1	(0)	486	1	131915
1192	26.9	3.8	1.2	chr1	73902385	73902790	(175053632)	+	LTR52	LTR/ERVL	1	417	(4)	137964
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
334	32.7	7.6	2.8	chr1	78252676	78253002	(170703420)	+	LTR33	LTR/ERVL	166	509	(6)	144324
855	27.9	16.7	3.4	chr1	79132743	79133472	(169822950)	+	HAL1	LINE/L1	1113	1958	(549)	145474
2641	17.9	2.3	1.5	chr1	79133501	79133600	(169822822)	C	MER66B	LTR/ERV1	(0)	486	390	145475
2358	9.7	0.3	0.0	chr1	79133601	79133899	(169822523)	C	AluSp	SINE/Alu	(13)	300	1	145476
9436	7.7	11.4	2.2	chr1	80052604	80054032	(168902390)	C	LTR12C	LTR/ERV1	(0)	1579	3	146673
324	20.3	0.0	7.8	chr1	80054033	80054080	(168902342)	+	HERVL18-int	LTR/ERVL	5224	5267	(780)	146672
250	17.8	0.0	0.0	chr1	80054081	80054125	(168902297)	+	HERVL18-int	LTR/ERVL	5946	5990	(57)	146672
469	31.1	5.1	0.0	chr1	81532019	81532166	(167424256)	+	MIRb	SINE/MIR	39	194	(74)	148577
13	23.3	2.5	0.0	chr1	84690281	84690320	(164266102)	+	(CGCC)n	Simple_repeat	1	41	(0)	152919
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
2864	16.1	0.0	1.6	chr1	87638547	87638845	(161317577)	+	MER66B	LTR/ERV1	191	486	(0)	157326
21	23.3	0.0	0.0	chr1	88683885	88683929	(160272493)	+	A-rich	Low_complexity	1	45	(0)	158815
12	20.4	5.6	3.5	chr1	88684485	88684538	(160271884)	+	(CTCTCCC)n	Simple_repeat	1	57	(0)	158816
15	24.4	0.0	0.0	chr1	88891121	88891159	(160065263)	+	G-rich	Low_complexity	1	39	(0)	159173
15	3.7	7.1	0.0	chr1	88992551	88992578	(159963844)	+	(GCGCC)n	Simple_repeat	1	30	(0)	159336
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
9667	11.0	3.7	3.9	chr1	90139115	90140697	(158815725)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	160911
15	8.5	4.7	6.7	chr1	90851702	90851744	(158104678)	+	(GCCCC)n	Simple_repeat	1	45	(0)	161860
316	29.7	10.5	0.9	chr1	91165555	91165666	(157790756)	+	LTR78	LTR/ERV1	23	146	(1158)	162371
185	18.8	2.0	4.0	chr1	91887133	91887182	(157069240)	+	L2c	LINE/L2	3084	3132	(255)	163411
1760	13.3	0.0	6.6	chr1	91887237	91887564	(157068858)	C	AluSz	SINE/Alu	(0)	312	2	163412
14	8.1	0.0	6.7	chr1	92784627	92784656	(156171766)	+	(GGC)n	Simple_repeat	1	30	(0)	165065
15	11.2	0.0	3.2	chr1	92784787	92784821	(156171601)	+	(CCGC)n	Simple_repeat	1	33	(0)	165066
6329	10.3	5.0	5.3	chr1	93287691	93288731	(155667691)	+	THE1C-int	LTR/ERVL-MaLR	1	1038	(542)	166048
997	32.7	18.0	2.9	chr1	93662141	93663301	(155293121)	C	L3	LINE/CR1	(483)	3616	2242	166640
16	8.5	0.0	0.0	chr1	94926230	94926254	(154030168)	+	(AGC)n	Simple_repeat	1	25	(0)	168515
11	18.1	2.4	4.8	chr1	94927015	94927055	(154029367)	+	(GGCGCG)n	Simple_repeat	1	42	(0)	168516
31	22.1	2.0	4.8	chr1	95234014	95234115	(153722307)	+	(GCCCC)n	Simple_repeat	1	104	(0)	169060
2935	14.8	1.0	1.4	chr1	97488596	97489083	(151467339)	+	MER66B	LTR/ERV1	1	486	(0)	172103
14	21.4	0.0	7.1	chr1	97921042	97921097	(151035325)	+	(GCGGC)n	Simple_repeat	1	56	(0)	172697
13	7.4	3.1	6.1	chr1	98661688	98661719	(150294703)	+	(GGC)n	Simple_repeat	1	33	(0)	173753
13	5.3	0.0	0.0	chr1	99970237	99970256	(148986166)	+	(GGA)n	Simple_repeat	1	20	(0)	175723
1891	22.3	1.9	6.5	chr1	104004480	104004969	(144951453)	+	MER66B	LTR/ERV1	20	486	(0)	181200
683	28.5	9.6	1.9	chr1	104004970	104005449	(144950973)	+	L1ME3B	LINE/L1	5722	6242	(0)	181199
15	19.4	4.1	2.0	chr1	107057503	107057551	(141898871)	+	(TGGAGC)n	Simple_repeat	1	51	(0)	184893
14	4.9	0.0	0.0	chr1	107692727	107692747	(141263675)	+	(AGC)n	Simple_repeat	1	21	(0)	185786
35	0.0	0.0	0.0	chr1	108526269	108526306	(140430116)	+	(A)n	Simple_repeat	1	38	(0)	186866
34	5.2	0.0	0.0	chr1	108560105	108560144	(140396278)	+	(GGC)n	Simple_repeat	1	40	(0)	186918
813	16.4	0.0	0.0	chr1	108827970	108828085	(140128337)	+	AluSz6	SINE/Alu	1	116	(196)	187390
35	0.0	0.0	0.0	chr1	108828088	108828120	(140128302)	+	(AAAC)n	Simple_repeat	1	33	(0)	187391
11	16.7	5.9	0.0	chr1	108828624	108828657	(140127765)	+	G-rich	Low_complexity	1	36	(0)	187392
15	17.7	2.6	0.0	chr1	110210231	110210268	(138746154)	+	(GCGCC)n	Simple_repeat	1	39	(0)	189740
1354	12.1	2.3	0.0	chr1	112820927	112821141	(136135281)	C	HERVH-int	LTR/ERV1	(1894)	5819	5600	193841
6169	12.8	5.4	0.2	chr1	112821143	112822269	(136134153)	C	HERVH-int	LTR/ERV1	(2564)	5149	3962	193841
277	27.9	3.4	1.1	chr1	113389729	113389860	(135566562)	C	MIRc	SINE/MIR	(47)	161	30	194967
185	21.6	2.6	0.0	chr1	113389863	113389899	(135566523)	+	L2b	LINE/L2	3338	3375	(0)	194975
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
1656	15.2	8.1	0.7	chr1	114582047	114582322	(134374100)	C	AluJr	SINE/Alu	(10)	302	5	196898
16	25.7	1.8	1.7	chr1	114670043	114670115	(134286307)	+	(CCCCAG)n	Simple_repeat	1	73	(0)	197085
2437	7.8	1.3	0.0	chr1	114780959	114781265	(134175157)	C	AluSz	SINE/Alu	(1)	311	1	197271
22	0.0	0.0	0.0	chr1	115641538	115641561	(133314861)	+	(TG)n	Simple_repeat	1	24	(0)	198478
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
1538	14.5	6.4	4.5	chr1	115707037	115707325	(133249097)	C	AluJb	SINE/Alu	(17)	295	1	198579
12051	9.4	0.6	0.6	chr1	116837115	116838695	(132117727)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	200352
13	19.2	6.1	1.9	chr1	145859802	145859850	(103096572)	+	(GGCTCG)n	Simple_repeat	1	52	(0)	211658
754	26.6	3.0	7.5	chr1	146787133	146787584	(102168838)	C	L1MEg	LINE/L1	(4396)	1688	1258	213216
1959	17.8	4.8	4.4	chr1	146787597	146788054	(102168368)	C	MER66B	LTR/ERV1	(0)	486	27	213217
202	28.4	8.7	4.0	chr1	147242302	147242400	(101714022)	+	L2b	LINE/L2	3271	3374	(1)	213841
3399	20.3	7.6	4.8	chr1	147394371	147395817	(101560605)	C	L1MD1	LINE/L1	(413)	6220	4745	214025
2075	17.9	8.7	0.7	chr1	147395819	147396251	(101560171)	C	MER66A	LTR/ERV1	(0)	478	8	214026
303	32.8	1.6	1.6	chr1	148522036	148522159	(100434263)	+	Charlie4a	DNA/hAT-Charlie	381	504	(4)	215836
20	9.8	0.0	0.0	chr1	149888245	149888277	(99068145)	+	(TTTTG)n	Simple_repeat	1	33	(0)	217934
15	17.4	2.9	0.0	chr1	150321483	150321516	(98634906)	+	(GCG)n	Simple_repeat	1	35	(0)	218779
16	32.0	1.4	1.4	chr1	150876559	150876629	(98079793)	+	(CGC)n	Simple_repeat	1	72	(0)	220009
2451	6.4	0.3	0.0	chr1	150876981	150877276	(98079146)	+	AluSq	SINE/Alu	1	297	(16)	220010
12	13.9	11.9	3.0	chr1	152048316	152048374	(96908048)	+	(GGCTGT)n	Simple_repeat	1	66	(0)	222321
207	28.6	2.3	4.5	chr1	152925933	152926020	(96030402)	C	MIR	SINE/MIR	(26)	236	151	223409
661	27.3	8.0	2.1	chr1	152926483	152926718	(96029704)	C	MIRb	SINE/MIR	(0)	268	18	223410
358	26.0	2.8	0.9	chr1	153698435	153698539	(95257883)	C	MIRc	SINE/MIR	(0)	268	162	224565
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
443	26.6	4.0	9.7	chr1	154559240	154559476	(94396946)	+	MIRc	SINE/MIR	20	242	(26)	226416
2908	15.3	1.6	0.6	chr1	154664714	154665194	(94291228)	+	MER66B	LTR/ERV1	1	486	(0)	226585
1921	17.3	3.5	6.7	chr1	154665195	154665311	(94291111)	+	LTR47A2	LTR/ERVL	37	149	(283)	226584
2271	8.7	0.0	3.4	chr1	154665312	154665609	(94290813)	+	AluSc	SINE/Alu	1	288	(21)	226586
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
2134	8.4	0.7	0.3	chr1	155244118	155244401	(93712021)	+	AluSx3	SINE/Alu	1	285	(26)	227606
27	3.5	0.0	0.0	chr1	155244402	155244431	(93711991)	+	(AAT)n	Simple_repeat	1	30	(0)	227607
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
12	23.3	0.0	0.0	chr1	155562151	155562185	(93394237)	+	(ACCGAG)n	Simple_repeat	1	35	(0)	228299
32	13.5	0.0	3.2	chr1	155562416	155562477	(93393945)	+	(GGC)n	Simple_repeat	1	62	(0)	228300
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
1426	15.0	13.1	7.8	chr1	155847928	155848259	(93108163)	+	MER66D	LTR/ERV1	131	482	(2)	228943
40	4.5	0.0	0.0	chr1	156053813	156053858	(92902564)	+	(CTCCC)n	Simple_repeat	1	46	(0)	229383
228	26.4	6.2	0.0	chr1	156079927	156080017	(92876405)	+	L3b	LINE/CR1	4937	5033	(199)	229432
2178	8.1	0.0	1.8	chr1	156445463	156445784	(92510638)	C	AluSz	SINE/Alu	(0)	312	1	230147
233	32.5	0.0	1.2	chr1	156446091	156446174	(92510248)	+	Tigger19b	DNA/TcMar-Tigger	376	458	(92)	230148
389	22.2	30.9	0.0	chr1	156446209	156446371	(92510051)	C	MIRb	SINE/MIR	(15)	247	34	230149
300	33.5	8.5	4.9	chr1	159684248	159684451	(89271971)	+	L2b	LINE/L2	2656	2867	(552)	234592
469	31.3	15.1	7.3	chr1	159684884	159685006	(89271416)	+	L2b	LINE/L2	2910	3034	(353)	234592
3018	16.9	0.2	0.4	chr1	160658716	160659202	(88297220)	C	MER66B	LTR/ERV1	(0)	486	1	236084
232	30.4	4.7	4.7	chr1	161389531	161389637	(87566785)	C	MER103C	DNA/hAT-Charlie	(123)	174	68	237440
13	17.2	4.9	2.3	chr1	161389847	161389887	(87566535)	+	(CTCCG)n	Simple_repeat	1	43	(0)	237441
2712	15.9	3.9	2.9	chr1	164524737	164525246	(84431176)	+	MER41B	LTR/ERV1	89	584	(50)	242243
725	17.0	24.0	1.8	chr1	164525247	164525464	(84430958)	+	LTR49	LTR/ERV1	3	271	(351)	242244
418	17.1	17.2	0.0	chr1	165236437	165236547	(83719875)	C	MER53	DNA/hAT	(0)	193	60	243317
823	22.3	11.3	0.0	chr1	165826648	165826844	(83129578)	C	MIR	SINE/MIR	(10)	252	31	244380
569	30.2	3.0	3.0	chr1	168219820	168220051	(80736371)	C	LTR16E1	LTR/ERVL	(0)	538	307	248032
1030	14.0	2.3	2.8	chr1	168220121	168220296	(80736126)	C	LTR9B	LTR/ERV1	(0)	644	470	248033
7060	16.9	2.5	1.1	chr1	171017139	171018900	(77937522)	+	L1PA8	LINE/L1	3	1796	(4687)	252090
3108	21.5	1.4	9.6	chr1	171219993	171220674	(77735748)	+	HERVIP10B3-int	LTR/ERV1	149	766	(4336)	252373
12	14.9	8.1	0.0	chr1	171220855	171220891	(77735531)	+	A-rich	Low_complexity	1	40	(0)	252375
26	33.0	0.0	2.8	chr1	171221017	171221123	(77735299)	+	GA-rich	Low_complexity	1	107	(0)	252376
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
13	13.2	0.0	0.0	chr1	172533420	172533444	(76422978)	+	(GAA)n	Simple_repeat	1	25	(0)	254354
1731	16.9	0.0	3.3	chr1	180578023	180578329	(68378093)	C	AluJr	SINE/Alu	(5)	307	11	266604
2029	15.3	6.3	3.4	chr1	180578342	180578726	(68377696)	+	MSTA	LTR/ERVL-MaLR	23	419	(9)	266605
1766	16.9	6.7	8.1	chr1	191992192	191992640	(56963782)	+	MER66D	LTR/ERV1	105	555	(0)	282824
1097	22.4	5.2	0.3	chr1	191992767	191993061	(56963361)	+	L1MA4	LINE/L1	5991	6300	(0)	282825
2420	18.7	2.0	2.7	chr1	194076061	194076549	(54879873)	+	MER66B	LTR/ERV1	1	486	(0)	285662
442	31.0	7.2	8.2	chr1	194076550	194076846	(54879576)	+	LTR68	LTR/ERV1	152	445	(295)	285661
18	14.5	0.0	2.5	chr1	196608422	196608461	(52347961)	+	G-rich	Low_complexity	1	40	(0)	288876
10597	11.2	2.1	2.2	chr1	197080684	197082265	(51874157)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	289450
14	12.9	2.6	5.1	chr1	200409732	200409769	(48546653)	+	GA-rich	Low_complexity	1	39	(0)	294192
17	11.1	0.0	0.0	chr1	200409951	200409979	(48546443)	+	(CCG)n	Simple_repeat	1	29	(0)	294193
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
1679	12.8	5.3	2.7	chr1	202927401	202927696	(46028726)	+	AluJb	SINE/Alu	1	304	(8)	298768
12	4.7	4.5	0.0	chr1	203327305	203327326	(45629096)	+	(CACC)n	Simple_repeat	1	23	(0)	299418
19	12.1	0.0	0.0	chr1	203327545	203327572	(45628850)	+	(A)n	Simple_repeat	1	28	(0)	299419
13	14.7	0.0	3.1	chr1	203327650	203327681	(45628741)	+	G-rich	Low_complexity	1	32	(0)	299420
524	30.6	6.1	7.2	chr1	204194467	204194730	(44761692)	C	L2c	LINE/L2	(5)	3382	3122	301161
848	19.5	7.0	0.0	chr1	204772279	204772478	(44183944)	C	MER66B	LTR/ERV1	(0)	486	272	302229
935	11.1	2.3	0.0	chr1	205335346	205335471	(43620951)	+	AluJr	SINE/Alu	166	294	(18)	303243
240	23.6	3.3	9.2	chr1	205335929	205336026	(43620396)	+	L2c	LINE/L2	3101	3192	(195)	303244
91	0.0	0.0	0.0	chr1	205648262	205648341	(43308081)	+	(AAAAT)n	Simple_repeat	1	80	(0)	303840
206	20.4	2.2	0.0	chr1	205648379	205648422	(43308000)	C	MIR	SINE/MIR	(158)	104	60	303841
2235	10.8	0.0	0.7	chr1	206082236	206082532	(42873890)	+	AluSg	SINE/Alu	1	295	(15)	304540
16	17.0	4.2	2.0	chr1	207396008	207396055	(41560367)	+	(CAGAAGG)n	Simple_repeat	1	50	(0)	306582
2811	15.8	1.9	0.8	chr1	207396209	207396687	(41559735)	C	MER66B	LTR/ERV1	(2)	484	1	306583
1869	15.3	4.1	3.3	chr1	207579398	207579883	(41376539)	+	MER66C	LTR/ERV1	1	536	(19)	306857
197	28.5	6.7	0.0	chr1	207580120	207580186	(41376236)	+	MIR3	SINE/MIR	35	105	(125)	306858
2066	14.5	2.6	0.0	chr1	207711625	207711927	(41244495)	+	AluSx	SINE/Alu	1	311	(1)	307058
2376	14.7	10.5	5.4	chr1	207711928	207712163	(41244259)	+	MER66C	LTR/ERV1	308	534	(21)	307057
295	28.3	22.0	0.5	chr1	212664925	212665109	(36291313)	C	MIRb	SINE/MIR	(19)	249	14	314922
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
2445	14.9	5.0	1.2	chr1	218137793	218138166	(30818256)	C	MER47B	DNA/TcMar-Tigger	(0)	418	24	322754
2342	16.2	2.3	5.0	chr1	218138167	218138666	(30817756)	C	MER66B	LTR/ERV1	(0)	486	1	322755
2445	14.9	5.0	1.2	chr1	218138667	218138693	(30817729)	C	MER47B	DNA/TcMar-Tigger	(395)	23	1	322754
1050	22.4	9.2	2.0	chr1	218828657	218828855	(30127567)	+	Tigger13a	DNA/TcMar-Tigger	374	577	(194)	323819
31	3.3	0.0	0.0	chr1	218828856	218828886	(30127536)	+	(AC)n	Simple_repeat	1	31	(0)	323820
1050	22.4	9.2	2.0	chr1	218828887	218829027	(30127395)	+	Tigger13a	DNA/TcMar-Tigger	578	741	(30)	323819
2307	18.5	11.1	0.0	chr1	218829031	218829462	(30126960)	C	MER66B	LTR/ERV1	(0)	486	1	323821
251	29.2	0.0	5.0	chr1	220732912	220733012	(28223410)	+	MIRc	SINE/MIR	161	256	(12)	326657
306	30.5	14.3	2.0	chr1	220733353	220733553	(28222869)	C	MER102c	DNA/hAT-Charlie	(85)	246	17	326658
14	15.5	2.6	2.6	chr1	222712506	222712543	(26243879)	+	(CCGCC)n	Simple_repeat	1	39	(0)	329541
15	18.9	2.3	2.2	chr1	222814877	222814920	(26141502)	+	(CCCTCTG)n	Simple_repeat	1	45	(0)	329730
786	29.2	3.3	3.3	chr1	223524466	223524709	(25431713)	C	MIR	SINE/MIR	(11)	251	8	330841
308	21.5	8.9	2.7	chr1	223524688	223524792	(25431630)	+	MIRb	SINE/MIR	163	268	(0)	330838
1899	20.1	2.7	5.3	chr1	223524883	223525443	(25430979)	C	MER41B	LTR/ERV1	(12)	543	1	330842
2818	15.8	3.7	0.4	chr1	223611208	223611677	(25344745)	+	MER66B	LTR/ERV1	1	486	(0)	330905
332	29.9	6.2	5.5	chr1	223611678	223611795	(25344627)	C	MamSINE1	SINE/tRNA-RTE	(82)	208	89	330904
299	5.3	0.0	0.0	chr1	223611949	223611986	(25344436)	C	MER5B	DNA/hAT-Charlie	(0)	178	141	330906
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
1903	13.9	0.7	0.0	chr1	225430909	225431182	(23525240)	C	AluSz	SINE/Alu	(6)	306	31	333961
9078	10.0	9.3	8.4	chr1	225431183	225432744	(23523678)	+	LTR12C	LTR/ERV1	3	1579	(0)	333962
349	35.8	8.5	1.9	chr1	226002404	226002665	(22953757)	+	MamRTE1	LINE/RTE-BovB	3478	3758	(54)	334985
808	18.1	6.9	0.0	chr1	226197332	226197519	(22758903)	+	Arthur1	DNA/hAT-Tip100	3535	3736	(211)	335416
327	28.8	11.1	4.4	chr1	226400677	226401090	(22555332)	+	LTR16D	LTR/ERVL	170	675	(0)	335826
409	10.3	17.9	1.1	chr1	226401104	226401191	(22555231)	+	L1MC1	LINE/L1	5937	6042	(291)	335827
2505	17.4	2.4	0.7	chr1	226401192	226401643	(22554779)	C	MER66B	LTR/ERV1	(0)	486	27	335828
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
281	32.8	6.3	4.5	chr1	226527056	226527256	(22429166)	+	Charlie15a	DNA/hAT-Charlie	19	223	(1)	336065
12	25.5	3.8	1.8	chr1	226527380	226527432	(22428990)	+	G-rich	Low_complexity	1	55	(0)	336066
2446	8.4	0.0	0.0	chr1	226828488	226828795	(22127627)	C	AluSg7	SINE/Alu	(1)	308	1	336551
203	23.3	15.1	7.6	chr1	227285799	227285877	(21670545)	+	L2a	LINE/L2	1222	1307	(2112)	337221
3505	19.8	3.3	1.3	chr1	227285888	227286660	(21669762)	C	MSTB-int	LTR/ERVL-MaLR	(862)	789	1	337222
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
947	21.2	8.8	1.2	chr1	228165156	228165386	(20791036)	+	L1MB3	LINE/L1	5824	6076	(107)	338374
529	19.6	0.0	0.0	chr1	228199136	228199232	(20757190)	C	L1M4b	LINE/L1	(4711)	2156	2060	338431
2854	22.7	10.5	4.9	chr1	228199219	228200342	(20756080)	C	L1M4b	LINE/L1	(5012)	1855	661	338431
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
18	24.5	0.0	0.0	chr1	228646795	228646837	(20309585)	+	(CA)n	Simple_repeat	1	43	(0)	338981
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
281	31.8	2.3	0.0	chr1	228841853	228841937	(20114485)	C	L2a	LINE/L2	(0)	3426	3340	339274
196	24.1	6.9	5.3	chr1	228841984	228842040	(20114382)	+	L2b	LINE/L2	3368	3425	(1)	339273
21	11.2	0.0	0.0	chr1	229559386	229559415	(19397007)	+	(T)n	Simple_repeat	1	30	(0)	340497
3232	12.3	8.7	0.0	chr1	229715069	229715562	(19240860)	+	MER66C	LTR/ERV1	1	541	(14)	340784
2488	16.7	1.5	1.0	chr1	229818793	229819217	(19137205)	+	MER66D	LTR/ERV1	105	598	(36)	340962
195	24.1	0.0	0.0	chr1	229819372	229819429	(19136993)	+	MIRc	SINE/MIR	192	249	(19)	340963
17	11.3	3.5	0.0	chr1	229819435	229819469	(19136953)	+	(AT)n	Simple_repeat	1	36	(0)	340964
376	8.2	0.0	0.0	chr1	230269140	230269188	(18687234)	C	AluYg6	SINE/Alu	(10)	301	253	341623
2315	9.8	0.0	0.0	chr1	230269189	230269485	(18686937)	C	AluSz	SINE/Alu	(15)	297	1	341624
4400	23.4	10.7	5.9	chr1	230533536	230534574	(18421848)	+	L1MEg	LINE/L1	2	1081	(5003)	342026
28	0.0	0.0	0.0	chr1	230753841	230753867	(18202555)	+	(CCTC)n	Simple_repeat	1	27	(0)	342358
15	9.9	0.0	7.9	chr1	230754112	230754149	(18202273)	+	G-rich	Low_complexity	1	38	(0)	342359
20	27.4	5.4	2.1	chr1	230754329	230754420	(18202002)	+	(AT)n	Simple_repeat	1	97	(0)	342360
3120	11.4	8.7	0.2	chr1	231725248	231725740	(17230682)	+	MER66C	LTR/ERV1	1	539	(16)	343977
492	18.1	7.8	5.9	chr1	231725926	231726144	(17230278)	C	LTR50	LTR/ERVL	(535)	260	1	343978
2017	17.1	12.2	0.7	chr1	231731170	231731576	(17224846)	C	MER66B	LTR/ERV1	(0)	486	27	343985
211	27.7	21.7	2.0	chr1	231965640	231965982	(16990440)	+	L2c	LINE/L2	2910	3338	(49)	344318
281	30.1	2.0	4.0	chr1	232143045	232143193	(16813229)	+	Charlie7	DNA/hAT-Charlie	34	179	(2433)	344562
2277	17.9	11.2	1.8	chr1	232143349	232143839	(16812583)	C	MER67A	LTR/ERV1	(0)	543	1	344563
1370	18.7	16.0	0.7	chr1	232243316	232243617	(16712805)	+	MER66D	LTR/ERV1	124	480	(4)	344705
363	24.8	7.5	3.6	chr1	232243800	232243966	(16712456)	+	MIRc	SINE/MIR	16	189	(79)	344708
422	24.9	2.3	9.1	chr1	232950120	232950204	(16006218)	+	MER5B	DNA/hAT-Charlie	89	172	(6)	345697
2087	10.7	2.7	0.0	chr1	234519907	234520195	(14436227)	C	AluSx1	SINE/Alu	(15)	297	1	348022
1441	19.1	0.0	8.6	chr1	234520196	234520410	(14436012)	+	MER50	LTR/ERV1	542	734	(0)	348021
26	44.7	0.0	0.0	chr1	234520468	234520629	(14435793)	+	(TGTG)n	Simple_repeat	1	162	(0)	348023
647	25.5	10.6	0.9	chr1	236081763	236081984	(12874438)	+	LTR16B	LTR/ERVL	143	388	(75)	350955
467	31.6	10.4	0.0	chr1	236082045	236082230	(12874192)	C	MIRc	SINE/MIR	(12)	256	42	350956
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
4538	22.4	7.9	2.4	chr1	236365604	236366794	(12589628)	C	L1MEc	LINE/L1	(4983)	1417	143	351479
2328	9.1	0.0	2.3	chr1	236366795	236367103	(12589319)	+	AluSx	SINE/Alu	1	302	(10)	351482
3476	14.7	0.4	3.9	chr1	239493836	239494396	(9462026)	C	MER66C	LTR/ERV1	(14)	541	1	356219
329	34.8	6.3	3.0	chr1	239550203	239550433	(9405989)	+	L2c	LINE/L2	3098	3336	(51)	356307
1026	20.1	2.3	6.9	chr1	241990214	241990351	(6966071)	+	MLT1G	LTR/ERVL-MaLR	262	400	(191)	360280
2426	7.4	1.0	0.0	chr1	241990352	241990647	(6965775)	C	AluSc8	SINE/Alu	(8)	303	5	360281
2862	15.3	4.1	0.2	chr1	242354043	242354559	(6601863)	+	MER66C	LTR/ERV1	1	538	(17)	360874
8845	20.8	5.7	2.0	chr1	242354560	242357482	(6598940)	C	L1MA7	LINE/L1	(1921)	5641	2593	360873
2639	17.9	0.8	0.4	chr1	242417240	242417717	(6538705)	+	MER66B	LTR/ERV1	7	486	(0)	360964
2461	28.7	9.2	5.1	chr1	242417720	242418681	(6537741)	C	L2a	LINE/L2	(377)	3042	2037	360963
19	17.2	3.1	4.5	chr1	243850281	243850295	(5106127)	+	GA-rich	Low_complexity	1	15	(0)	363170
28	0.0	0.0	0.0	chr1	243850296	243850321	(5106101)	+	(GGC)n	Simple_repeat	1	26	(0)	363171
19	17.2	3.1	4.5	chr1	243850322	243850370	(5106052)	+	GA-rich	Low_complexity	16	63	(0)	363172
14	24.6	1.4	6.9	chr1	243850536	243850606	(5105816)	+	(CCG)n	Simple_repeat	1	72	(0)	363173
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
15	23.9	4.1	0.0	chr1	244048208	244048256	(4908166)	+	(CGC)n	Simple_repeat	1	51	(0)	363518
15	13.1	2.0	8.0	chr1	244048243	244048291	(4908131)	+	(CCGCC)n	Simple_repeat	1	50	(0)	363519
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
939	25.1	27.1	2.9	chr1	245097548	245098474	(3857948)	C	L2a	LINE/L2	(66)	3360	2181	365469
3012	16.1	6.7	0.0	chr1	247793993	247794494	(1161928)	+	MER66C	LTR/ERV1	1	538	(17)	369635
2664	22.5	2.5	3.3	chr1	247794498	247794770	(1161652)	C	L1M3	LINE/L1	(2315)	3825	3562	369629
256	30.9	2.3	0.8	chr10	517218	517344	(133280078)	C	MER104	DNA/TcMar-Tc2	(6)	175	47	371587
15	5.6	0.0	0.0	chr10	1049464	1049482	(132747940)	+	(C)n	Simple_repeat	1	19	(0)	372220
12	25.1	0.0	2.5	chr10	2929297	2929336	(130868086)	+	GA-rich	Low_complexity	1	40	(0)	374370
2232	15.2	0.0	0.0	chr10	4072206	4072502	(129724920)	+	AluSz	SINE/Alu	2	298	(14)	375996
447	15.2	0.0	0.0	chr10	4072582	4072660	(129724762)	C	MER66C	LTR/ERV1	(4)	551	473	375997
2396	18.1	2.5	3.7	chr10	6044176	6044667	(127752755)	C	MER66B	LTR/ERV1	(0)	486	1	378798
12955	3.2	0.1	0.0	chr10	6288203	6290477	(127506945)	C	L1PA3	LINE/L1	(0)	6155	3880	379257
16	0.0	0.0	0.0	chr10	8890687	8890703	(124906719)	+	(A)n	Simple_repeat	1	17	(0)	383485
2218	20.6	3.4	2.1	chr10	8890925	8891396	(124906026)	C	MER66A	LTR/ERV1	(0)	478	1	383486
1112	16.4	0.0	0.0	chr10	10595750	10595908	(123201514)	+	AluSc8	SINE/Alu	136	294	(17)	385846
1763	19.9	3.9	11.7	chr10	10595909	10596129	(123201293)	+	MER66B	LTR/ERV1	268	486	(0)	385845
3416	13.0	3.1	1.1	chr10	10975703	10976246	(122821176)	C	MER66C	LTR/ERV1	(0)	555	1	386386
7519	20.9	6.6	4.3	chr10	11351593	11352099	(122445323)	C	MER66-int	LTR/ERV1	(5960)	716	198	386744
3053	14.9	6.3	0.4	chr10	11352264	11352782	(122444640)	C	MER66C	LTR/ERV1	(3)	552	1	386744
429	22.6	1.2	1.2	chr10	16017314	16017398	(117780024)	C	MER58A	DNA/hAT-Charlie	(139)	85	1	395140
688	9.8	2.9	0.0	chr10	16017590	16017691	(117779731)	C	MER66D	LTR/ERV1	(21)	534	430	395141
7368	3.7	0.7	0.0	chr10	16017705	16018596	(117778826)	C	L1PA5	LINE/L1	(3)	6151	5254	395142
534	32.2	6.7	1.4	chr10	17550211	17550421	(116247001)	C	MIRb	SINE/MIR	(17)	251	29	397608
2774	15.5	4.5	2.5	chr10	17550424	17550717	(116246705)	C	MER66B	LTR/ERV1	(0)	486	202	397609
1606	12.5	22.8	0.3	chr10	17895722	17896067	(115901355)	C	MER66A	LTR/ERV1	(5)	473	27	398221
1666	19.6	0.9	7.2	chr10	21264726	21264920	(112532502)	C	MLT1A0	LTR/ERVL-MaLR	(25)	340	150	403273
33	0.0	5.3	0.0	chr10	21264921	21264958	(112532464)	+	(TTTTAT)n	Simple_repeat	1	40	(0)	403274
1989	10.7	0.0	0.0	chr10	21264966	21265217	(112532205)	C	AluSx	SINE/Alu	(55)	257	6	403275
475	34.4	2.5	0.9	chr10	24503538	24503769	(109293653)	C	MER102b	DNA/hAT-Charlie	(96)	245	10	408589
16	3.5	3.0	5.9	chr10	24723960	24723992	(109073430)	+	(CCTCC)n	Simple_repeat	1	34	(0)	408956
10533	11.5	0.9	3.1	chr10	25390202	25391816	(108405606)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	410140
861	13.0	0.0	0.8	chr10	30175569	30175691	(103621731)	C	FLAM_C	SINE/Alu	(21)	122	1	418186
796	25.0	9.7	12.9	chr10	30175692	30175847	(103621575)	C	L1ME4b	LINE/L1	(739)	153	1	418180
2231	10.2	0.0	3.0	chr10	30175969	30176272	(103621150)	+	AluSx1	SINE/Alu	1	295	(17)	418187
12	8.4	0.0	6.9	chr10	31031928	31031956	(102765466)	+	(GCCCC)n	Simple_repeat	1	29	(0)	419722
19	16.9	2.0	2.0	chr10	31032472	31032520	(102764902)	+	(GCTCCCG)n	Simple_repeat	1	50	(0)	419723
2375	18.0	2.9	0.5	chr10	34206449	34206889	(99590533)	C	MER66A	LTR/ERV1	(0)	478	27	424413
2317	8.5	0.0	0.0	chr10	34674479	34674786	(99122636)	C	AluSx1	SINE/Alu	(0)	312	1	425063
1511	16.4	11.9	3.9	chr10	34674787	34674868	(99122554)	+	MER66A	LTR/ERV1	397	477	(1)	425062
8943	20.9	5.2	2.0	chr10	38239189	38242121	(95555301)	+	L1MA7	LINE/L1	2592	5641	(1921)	430721
2873	15.5	4.1	0.2	chr10	38242122	38242638	(95554784)	C	MER66C	LTR/ERV1	(17)	538	1	430723
325	25.9	18.7	2.8	chr10	43574927	43575208	(90222214)	C	L2a	LINE/L2	(1)	3425	3089	433810
268	28.7	4.9	1.4	chr10	45594285	45594422	(88203000)	C	MIR3	SINE/MIR	(18)	190	48	436270
37	0.0	2.6	0.0	chr10	45594600	45594637	(88202785)	+	(CCCAG)n	Simple_repeat	1	39	(0)	436271
14	8.1	0.0	6.7	chr10	45594704	45594733	(88202689)	+	(GGC)n	Simple_repeat	1	30	(0)	436272
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
12	21.5	6.0	1.9	chr10	45727311	45727360	(88070062)	+	(GGCTG)n	Simple_repeat	1	53	(0)	436502
518	24.9	5.5	6.4	chr10	48552016	48552217	(85245205)	C	MamRep564	Unknown	(83)	274	75	440700
2284	11.2	0.7	0.0	chr10	52400276	52400579	(81396843)	+	AluSx	SINE/Alu	1	306	(6)	446230
2249	17.8	1.3	5.6	chr10	52400580	52400883	(81396539)	C	MER65C	LTR/ERV1	(159)	302	1	446229
421	37.0	8.6	7.3	chr10	52400884	52401074	(81396348)	+	L3	LINE/CR1	3891	4079	(20)	446227
8486	15.0	5.7	4.0	chr10	57211320	57212842	(76584580)	C	THE1D-int	LTR/ERVL-MaLR	(30)	1550	1	452447
986	29.1	3.2	0.0	chr10	59919966	59920208	(73877214)	+	Tigger17c	DNA/TcMar-Tigger	1	251	(937)	456295
1783	18.1	10.8	3.5	chr10	59920209	59920231	(73877191)	+	MSTB	LTR/ERVL-MaLR	1	23	(403)	456296
2879	16.8	2.7	1.1	chr10	59920232	59920701	(73876721)	C	MER66A	LTR/ERV1	(0)	478	1	456297
750	15.9	0.0	1.3	chr10	60845968	60846094	(72951328)	+	FLAM_C	SINE/Alu	14	133	(0)	457711
232	27.2	5.2	1.1	chr10	60846169	60846261	(72951161)	C	MER5A	DNA/hAT-Charlie	(21)	168	72	457712
501	24.5	16.4	0.0	chr10	60846444	60846657	(72950765)	+	MIR	SINE/MIR	2	253	(9)	457713
2873	15.6	1.9	1.7	chr10	61132940	61133416	(72664006)	+	MER66A	LTR/ERV1	1	478	(0)	458132
14	15.2	0.0	7.1	chr10	63521224	63521265	(70276157)	+	(GCCCTG)n	Simple_repeat	1	42	(0)	461935
13	27.7	1.5	4.5	chr10	63521301	63521323	(70276099)	+	G-rich	Low_complexity	1	66	(0)	461936
17	8.3	4.8	4.5	chr10	63521324	63521365	(70276057)	+	(GGCG)n	Simple_repeat	1	44	(0)	461937
1677	23.0	4.2	7.1	chr10	65570727	65571292	(68226130)	+	MER61-int	LTR/ERV1	1	549	(4668)	464914
9061	8.8	3.6	1.8	chr10	65571437	65572559	(68224863)	+	MER61-int	LTR/ERV1	1760	2906	(2311)	464914
1572	20.9	11.0	4.7	chr10	66455411	66455858	(67341564)	+	MER66D	LTR/ERV1	1	480	(4)	466111
1964	20.5	10.2	0.7	chr10	66455868	66456471	(67340951)	+	L1MD1	LINE/L1	4692	5359	(1185)	466107
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
18	4.7	0.0	0.0	chr10	68075419	68075440	(65721982)	+	(G)n	Simple_repeat	1	22	(0)	468461
15	0.0	0.0	0.0	chr10	72027666	72027682	(61769740)	+	(AG)n	Simple_repeat	1	17	(0)	476381
693	11.2	0.0	3.7	chr10	72027962	72028068	(61769354)	C	AluSz6	SINE/Alu	(0)	312	210	476382
1608	9.8	3.1	4.9	chr10	72364016	72364281	(61433141)	C	AluSc8	SINE/Alu	(16)	295	35	477118
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
28	28.2	1.6	4.0	chr10	73495826	73495949	(60301473)	+	G-rich	Low_complexity	1	126	(0)	479398
15	17.6	0.0	4.8	chr10	73997951	73997992	(59799430)	+	G-rich	Low_complexity	1	42	(0)	480356
2774	16.7	2.2	0.4	chr10	74160125	74160576	(59636846)	+	MER66B	LTR/ERV1	27	486	(0)	480669
41	2.6	0.0	0.0	chr10	74160691	74160730	(59636692)	+	(GT)n	Simple_repeat	1	40	(0)	480670
766	21.7	14.3	5.3	chr10	74252738	74252946	(59544476)	+	Arthur1B	DNA/hAT-Tip100	59	289	(936)	480866
522	27.2	9.4	4.2	chr10	74252989	74253066	(59544356)	+	Arthur1B	DNA/hAT-Tip100	366	440	(785)	480867
2089	18.2	5.8	3.0	chr10	74253067	74253535	(59543887)	C	MER66B	LTR/ERV1	(3)	483	1	480868
2615	16.2	1.0	3.8	chr10	86045981	86046480	(47750942)	+	MER66B	LTR/ERV1	1	486	(0)	498897
998	27.9	8.1	3.1	chr10	86258391	86258708	(47538714)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	77	499205
309	33.6	6.3	1.5	chr10	86258918	86259053	(47538369)	+	HAL1b	LINE/L1	1251	1393	(1028)	499206
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
2678	17.1	6.0	1.5	chr10	88804495	88805017	(44992405)	+	MER66C	LTR/ERV1	1	548	(7)	503385
368	35.0	9.6	2.6	chr10	88805081	88805439	(44991983)	C	L2a	LINE/L2	(0)	3426	2977	503386
12429	9.6	0.2	0.3	chr10	89253577	89255158	(44542264)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	504106
1186	24.4	16.2	1.5	chr10	91544351	91544811	(42252611)	+	L1MC5a	LINE/L1	1886	2427	(350)	507445
361	20.0	9.9	10.0	chr10	91545151	91545377	(42252045)	+	L1MC5	LINE/L1	8945	9105	(199)	507446
16	0.0	0.0	0.0	chr10	91797956	91797975	(41999447)	+	(AAC)n	Simple_repeat	1	20	(0)	507863
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
311	27.8	9.5	0.0	chr10	92592773	92592905	(41204517)	C	MIR	SINE/MIR	(20)	242	96	509471
14	8.7	0.0	3.7	chr10	93437262	93437288	(40360134)	+	(TTC)n	Simple_repeat	1	27	(0)	511106
2586	15.2	4.9	1.5	chr10	93712459	93712927	(40084495)	+	MER66B	LTR/ERV1	1	486	(0)	511649
2314	21.0	5.5	6.4	chr10	93712928	93713442	(40083980)	+	MER92B	LTR/ERV1	102	636	(0)	511648
22	29.4	1.3	0.0	chr10	94402731	94402759	(39394663)	+	(GGCGGA)n	Simple_repeat	1	73	(0)	512920
23	15.7	0.0	0.0	chr10	94402760	94402802	(39394620)	+	GA-rich	Low_complexity	1	43	(0)	512921
4092	22.8	7.1	2.4	chr10	95056122	95056823	(38740599)	+	L1MB5	LINE/L1	5332	6083	(91)	513757
2111	17.8	6.4	0.7	chr10	95056824	95057281	(38740141)	C	MER66B	LTR/ERV1	(0)	486	1	513759
2540	23.5	5.1	3.0	chr10	95996419	95996781	(37800641)	C	L1ME3E	LINE/L1	(23)	6219	5831	515228
1559	19.9	7.8	1.8	chr10	95996782	95997164	(37800258)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	515229
2540	23.5	5.1	3.0	chr10	95997165	95997349	(37800073)	C	L1ME3E	LINE/L1	(412)	5830	5655	515228
672	9.6	0.0	0.0	chr10	96256050	96256132	(37541290)	+	AluSz	SINE/Alu	1	83	(229)	515645
387	30.7	6.3	3.0	chr10	96256140	96256337	(37541085)	C	CR1_Mam	LINE/CR1	(1276)	928	724	515646
2511	16.6	5.9	0.2	chr10	96279246	96279679	(37517743)	+	MER66B	LTR/ERV1	27	486	(0)	515681
819	20.4	7.1	0.5	chr10	96279680	96279876	(37517546)	+	L1MC5a	LINE/L1	330	540	(2237)	515682
1047	24.6	11.8	4.8	chr10	96279874	96280022	(37517400)	+	L1MC5a	LINE/L1	691	837	(1940)	515682
1736	14.8	7.2	0.0	chr10	97433754	97434024	(36363398)	C	AluSg	SINE/Alu	(12)	298	7	517980
467	35.5	3.1	0.0	chr10	97446519	97446673	(36350749)	C	MIR3	SINE/MIR	(21)	187	28	518010
471	25.0	4.2	11.1	chr10	98464142	98464348	(35333074)	+	Charlie23a	DNA/hAT-Charlie	135	326	(13)	519964
334	29.5	17.6	3.6	chr10	98464443	98464695	(35332727)	+	L2b	LINE/L2	3080	3375	(0)	519960
15	0.0	0.0	0.0	chr10	100228977	100228993	(33568429)	+	(GC)n	Simple_repeat	1	17	(0)	522978
38	0.0	0.0	0.0	chr10	100228994	100229026	(33568396)	+	(CA)n	Simple_repeat	1	33	(0)	522979
18	28.7	1.6	1.6	chr10	100229115	100229175	(33568247)	+	(CA)n	Simple_repeat	1	62	(0)	522980
2958	15.9	3.3	2.1	chr10	101158695	101159174	(32638248)	+	MER66B	LTR/ERV1	1	486	(0)	524559
13	11.2	0.0	6.1	chr10	102395989	102396021	(31401401)	+	(TGCCCC)n	Simple_repeat	1	33	(0)	526854
183	40.2	3.6	0.0	chr10	102679299	102679405	(31118017)	+	L2a	LINE/L2	3312	3422	(4)	527363
2385	16.1	2.9	11.9	chr10	102847486	102847899	(30949523)	C	MER66B	LTR/ERV1	(0)	486	71	527698
412	24.3	16.2	1.3	chr10	102964648	102964788	(30832634)	+	MIR	SINE/MIR	43	213	(55)	527959
2215	17.3	3.4	1.2	chr10	102964789	102965187	(30832235)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	527960
16	12.7	0.0	5.3	chr10	104254573	104254610	(29542812)	+	(GGTCAG)n	Simple_repeat	1	38	(0)	530422
1610	18.6	16.2	4.5	chr10	106961606	106962027	(26835395)	+	MER66C	LTR/ERV1	61	541	(14)	534554
2412	10.1	1.9	0.0	chr10	106962118	106962424	(26834998)	+	AluSp	SINE/Alu	1	313	(0)	534555
1333	21.4	0.0	0.4	chr10	109956577	109956801	(23840621)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	538672
873	20.6	5.7	9.8	chr10	109956815	109957088	(23840334)	+	MLT1K	LTR/ERVL-MaLR	332	593	(2)	538663
14	30.7	0.0	0.0	chr10	110008207	110008254	(23789168)	+	(GGC)n	Simple_repeat	1	48	(0)	538775
12	7.2	2.9	8.3	chr10	110304755	110304789	(23492633)	+	G-rich	Low_complexity	1	36	(0)	539232
16	8.7	0.0	0.0	chr10	110304800	110304841	(23492581)	+	(GCA)n	Simple_repeat	1	42	(0)	539233
557	15.8	15.5	0.8	chr10	110305131	110305251	(23492171)	+	MER5A	DNA/hAT-Charlie	48	189	(0)	539234
292	29.1	3.7	0.0	chr10	110305284	110305386	(23492036)	+	SVA_F	Retroposon/SVA	194	300	(1075)	539235
817	12.6	0.0	0.0	chr10	110305295	110305405	(23492017)	C	FLAM_C	SINE/Alu	(32)	111	1	539236
15	30.2	1.4	2.7	chr10	117375228	117375299	(16422123)	+	(CCCGCC)n	Simple_repeat	1	73	(0)	550342
972	25.4	8.8	4.8	chr10	121258819	121259153	(12538269)	+	L1ME3A	LINE/L1	5817	6166	(7)	556878
2394	19.5	1.0	0.5	chr10	121259248	121259660	(12537762)	C	MER66B	LTR/ERV1	(0)	486	72	556879
13	14.0	4.7	4.4	chr10	122374765	122374807	(11422615)	+	(GCCGCG)n	Simple_repeat	1	45	(0)	558776
1448	4.5	0.0	0.0	chr10	122928077	122928253	(10869169)	C	L1PA4	LINE/L1	(7)	6148	5972	559498
1546	15.5	4.7	1.1	chr10	122928254	122928318	(10869104)	+	MER66D	LTR/ERV1	419	484	(0)	559497
375	20.3	0.0	0.0	chr10	122928473	122928531	(10868891)	+	Tigger3	DNA/TcMar-Tigger	2	60	(2969)	559499
627	10.9	3.2	0.0	chr10	122928532	122928623	(10868799)	C	LTR32	LTR/ERVL	(0)	457	363	559500
12	20.8	3.6	5.3	chr10	124054102	124054156	(9743266)	+	(CCTT)n	Simple_repeat	1	57	(0)	561290
1998	19.0	7.7	4.4	chr10	125710974	125711233	(8086189)	C	Charlie7	DNA/hAT-Charlie	(832)	1780	1518	563905
2453	17.2	3.5	1.1	chr10	125711234	125711679	(8085743)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	563907
3295	20.2	3.2	2.8	chr10	127607067	127607784	(6189638)	C	L1MD1	LINE/L1	(6)	6236	5516	566398
593	14.9	0.0	0.0	chr10	127607777	127607863	(6189559)	C	L1MDa	LINE/L1	(6376)	257	171	566399
2003	17.0	8.7	11.0	chr10	127607864	127608418	(6189004)	C	MER66C	LTR/ERV1	(14)	541	1	566400
2933	14.6	9.8	0.2	chr10	128554213	128554701	(5242721)	C	MER66C	LTR/ERV1	(14)	541	1	567555
2161	20.3	5.6	0.7	chr10	131660109	131660569	(2136853)	C	MER66B	LTR/ERV1	(1)	485	1	570790
624	7.9	0.0	4.7	chr10	132335531	132335636	(1461786)	C	LTR71B	LTR/ERV1	(150)	460	360	571548
3047	7.7	3.7	0.0	chr10	132335634	132336072	(1461350)	C	LTR71B	LTR/ERV1	(154)	456	1	571549
2542	23.6	8.5	2.0	chr10	133586718	133588370	(209052)	C	L1ME1	LINE/L1	(5)	6174	4390	572658
640	3.9	0.0	0.0	chr10	133588371	133588447	(208975)	C	MER66C	LTR/ERV1	(14)	541	465	572659
277	21.2	4.3	0.0	chr10	133588448	133588513	(208909)	+	L1MD	LINE/L1	3895	3963	(2183)	572660
1064	26.9	4.0	8.7	chr10	133588498	133589001	(208421)	+	L1M5	LINE/L1	4632	5110	(1036)	572661
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
3512	17.6	12.7	4.8	chr11	6683720	6684040	(128402582)	C	Zaphod3	DNA/hAT-Tip100	(0)	2623	2236	581657
13	27.1	0.0	2.2	chr11	9573405	9573450	(125513172)	+	G-rich	Low_complexity	1	46	(0)	586106
12	21.1	0.0	7.8	chr11	9664024	9664074	(125422548)	+	G-rich	Low_complexity	1	51	(0)	586301
2976	16.4	1.0	0.4	chr11	11665505	11665987	(123420635)	+	MER66B	LTR/ERV1	1	486	(0)	589553
255	18.8	3.0	0.0	chr11	11752429	11752492	(123334130)	+	MLT1H	LTR/ERVL-MaLR	21	86	(463)	589685
2344	17.4	2.3	8.9	chr11	11752493	11753009	(123333613)	C	MER66D	LTR/ERV1	(0)	484	3	589686
24	15.5	3.9	1.9	chr11	12830668	12830719	(122255903)	+	(TA)n	Simple_repeat	1	54	(0)	591376
12	28.9	0.0	0.0	chr11	16607416	16607457	(118479165)	+	A-rich	Low_complexity	1	42	(0)	597237
13	30.3	4.0	1.3	chr11	16607821	16607894	(118478728)	+	(CAGG)n	Simple_repeat	1	77	(0)	597238
2557	17.3	1.2	2.4	chr11	19550707	19551198	(115535424)	+	MER66B	LTR/ERV1	1	486	(0)	602420
249	27.3	11.4	1.8	chr11	19551318	19551474	(115535148)	C	MIRb	SINE/MIR	(62)	206	26	602421
2333	9.3	0.3	3.5	chr11	20672852	20673161	(114413461)	C	AluSp	SINE/Alu	(13)	300	1	604309
2288	16.9	7.0	3.2	chr11	23058214	23058677	(112027945)	+	MER66D	LTR/ERV1	2	484	(0)	607806
695	25.0	2.0	1.5	chr11	26417224	26417422	(108669200)	+	L1ME2	LINE/L1	5683	5882	(282)	612453
950	20.3	4.8	3.9	chr11	26417423	26417627	(108668995)	C	MER66D	LTR/ERV1	(0)	484	278	612454
18	27.4	4.0	0.0	chr11	27362890	27362963	(107723659)	+	(TCATCG)n	Simple_repeat	1	77	(0)	613838
12	17.7	3.1	0.0	chr11	27363015	27363046	(107723576)	+	(GCGGCA)n	Simple_repeat	1	33	(0)	613839
27	3.4	0.0	0.0	chr11	31810558	31810587	(103276035)	+	(GCGCTG)n	Simple_repeat	1	30	(0)	620438
15	13.7	4.8	2.3	chr11	31810589	31810630	(103275992)	+	(GCTCGCC)n	Simple_repeat	1	44	(0)	620439
17	18.6	7.3	0.0	chr11	31810721	31810775	(103275847)	+	G-rich	Low_complexity	1	59	(0)	620440
197	35.4	2.5	0.0	chr11	31883303	31883381	(103203241)	+	MIR1_Amn	SINE/MIR	72	152	(78)	620569
1509	19.9	2.3	0.0	chr11	31883467	31883762	(103202860)	+	L1MC1	LINE/L1	6009	6311	(22)	620570
8186	8.2	21.2	0.3	chr11	32887479	32888724	(102197898)	C	LTR12C	LTR/ERV1	(0)	1579	3	622429
19	0.0	3.3	3.2	chr11	33257658	33257687	(101828935)	+	(AGC)n	Simple_repeat	1	31	(0)	623168
14	19.3	6.4	0.0	chr11	33774502	33774548	(101312074)	+	(CCTGGC)n	Simple_repeat	1	50	(0)	624031
253	28.6	2.3	2.3	chr11	34243628	34243713	(100842909)	+	MIRb	SINE/MIR	138	223	(45)	624911
18	3.7	0.0	6.2	chr11	35662600	35662631	(99423991)	+	(TCC)n	Simple_repeat	1	32	(0)	627134
30	14.9	1.4	4.1	chr11	36149834	36149905	(98936717)	+	(CTCATGA)n	Simple_repeat	1	73	(0)	627946
2437	21.7	4.6	0.7	chr11	37717854	37718415	(97368207)	+	L1MC3	LINE/L1	6707	7291	(494)	630248
2016	17.7	9.1	10.4	chr11	37718416	37718964	(97367658)	C	MER66C	LTR/ERV1	(14)	541	1	630249
2496	19.2	0.8	2.3	chr11	37912296	37912780	(97173842)	C	MER66B	LTR/ERV1	(0)	486	9	630521
464	29.3	4.6	0.5	chr11	43881084	43881272	(91205350)	C	MIRb	SINE/MIR	(50)	218	22	639138
252	18.7	14.0	8.9	chr11	43881274	43881408	(91205214)	C	MER5A	DNA/hAT-Charlie	(0)	189	47	639139
459	24.8	3.8	6.1	chr11	44066864	44067026	(91019596)	C	MIR	SINE/MIR	(1)	261	103	639504
438	35.4	4.5	9.9	chr11	45846730	45847011	(89239611)	+	MIRb	SINE/MIR	1	266	(2)	642908
16	16.4	0.0	0.0	chr11	45847015	45847048	(89239574)	+	(TGATGG)n	Simple_repeat	1	34	(0)	642909
2356	9.7	1.3	0.0	chr11	46215039	46215337	(88871285)	+	AluSq2	SINE/Alu	1	303	(10)	643512
2570	15.7	5.3	3.0	chr11	46215338	46215441	(88871181)	+	MER66B	LTR/ERV1	394	486	(0)	643511
958	15.6	0.0	1.9	chr11	46215442	46215572	(88871050)	C	AluJo	SINE/Alu	(41)	271	142	643510
20	17.6	1.8	3.6	chr11	57324777	57324831	(77761791)	+	(CCCCGC)n	Simple_repeat	1	56	(0)	653465
27	8.3	0.0	0.0	chr11	57324891	57324929	(77761693)	+	(CCG)n	Simple_repeat	1	39	(0)	653466
2321	6.6	3.4	0.0	chr11	57752253	57752540	(77334082)	+	AluSx1	SINE/Alu	1	298	(14)	654402
655	15.9	6.1	11.5	chr11	59565602	59565652	(75520970)	+	MER53	DNA/hAT	160	193	(0)	656980
1002	9.7	0.0	0.8	chr11	59565732	59565865	(75520757)	C	AluSz	SINE/Alu	(179)	133	1	656982
1177	12.8	1.7	0.0	chr11	60811670	60811841	(74274781)	C	AluSx	SINE/Alu	(9)	303	129	658918
13	22.3	1.9	5.6	chr11	61281503	61281555	(73805067)	+	GA-rich	Low_complexity	1	54	(0)	659861
2026	13.6	0.7	1.0	chr11	62424449	62424750	(72661872)	+	AluJo	SINE/Alu	1	301	(11)	662046
2169	7.1	0.3	5.9	chr11	62425007	62425329	(72661293)	+	AluSx	SINE/Alu	1	305	(7)	662047
183	27.9	0.0	0.0	chr11	64044955	64044997	(71041625)	C	L2b	LINE/L2	(213)	3162	3120	664906
2532	28.8	7.7	3.2	chr11	64461382	64462138	(70624484)	C	L1ME3G	LINE/L1	(1170)	4976	4179	665668
2382	19.0	2.5	5.6	chr11	64462139	64462348	(70624274)	C	MER66B	LTR/ERV1	(0)	486	291	665670
30	0.0	0.0	0.0	chr11	64462349	64462377	(70624245)	+	(CAGGG)n	Simple_repeat	1	29	(0)	665671
2382	19.0	2.5	5.6	chr11	64462378	64462400	(70624222)	C	MER66B	LTR/ERV1	(196)	290	266	665670
2139	10.2	4.7	0.0	chr11	64462401	64462683	(70623939)	C	AluSx	SINE/Alu	(15)	297	1	665672
27	17.4	5.1	8.3	chr11	64803150	64803287	(70283335)	+	G-rich	Low_complexity	1	145	(0)	666238
315	33.1	11.4	1.8	chr11	64917652	64917817	(70168805)	C	MIRb	SINE/MIR	(32)	236	53	666432
3051	15.3	3.3	0.4	chr11	65146593	65147064	(69939558)	C	MER66B	LTR/ERV1	(0)	486	1	666931
183	26.5	8.1	5.6	chr11	65541044	65541115	(69545507)	C	MIRb	SINE/MIR	(95)	173	100	667740
2480	17.9	4.8	0.0	chr11	65687922	65688373	(69398249)	+	MER66A	LTR/ERV1	1	475	(3)	667982
1411	18.5	3.2	3.2	chr11	65688383	65688723	(69397899)	C	MER83B-int	LTR/ERV1	(1912)	4351	4011	667988
2444	26.5	6.5	4.6	chr11	65699872	65700094	(69386528)	C	MER66-int	LTR/ERV1	(6431)	245	23	668013
2796	15.7	0.4	0.2	chr11	65700229	65700687	(69385935)	C	MER66C	LTR/ERV1	(2)	553	94	668013
239	29.2	6.0	0.9	chr11	66183430	66183573	(68903049)	C	MIR3	SINE/MIR	(99)	169	15	669000
2333	15.7	4.9	0.9	chr11	66183592	66184022	(68902600)	C	MER66A	LTR/ERV1	(3)	475	27	669003
20	10.4	0.0	0.0	chr11	66345675	66345706	(68740916)	+	(TAA)n	Simple_repeat	1	32	(0)	669276
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
2996	14.8	2.7	0.4	chr11	71078556	71079030	(64007592)	+	MER66B	LTR/ERV1	1	486	(0)	677664
2747	25.5	10.7	2.2	chr11	71079031	71079300	(64007322)	+	L1MC4a	LINE/L1	7305	7598	(284)	677663
1718	16.3	3.2	2.1	chr11	73607291	73607572	(61479050)	+	AluJb	SINE/Alu	9	293	(19)	682220
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
218	34.7	19.0	0.0	chr11	73876262	73876457	(61210165)	+	MIRb	SINE/MIR	4	245	(23)	682918
193	39.7	7.3	3.1	chr11	74340705	74341029	(60745593)	C	L2c	LINE/L2	(116)	3271	2932	683873
2170	20.8	4.6	6.8	chr11	74341308	74341410	(60745212)	C	MER41B	LTR/ERV1	(36)	598	437	683874
2375	11.9	0.0	0.0	chr11	74341411	74341721	(60744901)	+	AluSz	SINE/Alu	2	312	(0)	683875
12	21.0	10.0	0.0	chr11	74988963	74989022	(60097600)	+	(GTCTCC)n	Simple_repeat	1	66	(0)	685136
1840	11.8	0.0	0.0	chr11	75398876	75399148	(59687474)	C	AluSx1	SINE/Alu	(0)	312	37	685979
206	37.4	8.7	0.0	chr11	75399208	75399354	(59687268)	+	MIR3	SINE/MIR	33	193	(15)	685980
34	2.8	0.0	0.0	chr11	75815232	75815268	(59271354)	+	(CAGCGGCGG)n	Simple_repeat	1	37	(0)	686819
206	25.3	7.4	0.0	chr11	76784921	76784995	(58301627)	+	MIR1_Amn	SINE/MIR	94	174	(56)	688676
13	19.2	6.1	1.9	chr11	82733767	82733815	(52352807)	+	(CGCCCC)n	Simple_repeat	1	52	(0)	699379
227	38.7	0.0	0.0	chr11	88484996	88485101	(46601521)	C	L1M2b	LINE/L1	(5723)	1486	1381	708646
1401	27.2	2.6	2.3	chr11	88485387	88486060	(46600562)	C	L1P4d	LINE/L1	(5824)	1111	21	708645
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
15	25.8	0.0	3.7	chr11	94544528	94544581	(40542041)	+	(CGG)n	Simple_repeat	1	54	(0)	717313
401	25.9	0.9	0.9	chr11	94559382	94559494	(40527128)	C	Charlie15a	DNA/hAT-Charlie	(2)	222	110	717340
705	28.0	9.3	0.3	chr11	94559622	94559904	(40526718)	+	L4_A_Mam	LINE/RTE-X	2608	2918	(2072)	717341
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
40	4.9	0.0	0.0	chr11	102317589	102317631	(32768991)	+	(GT)n	Simple_repeat	1	43	(0)	727750
2106	12.5	0.7	1.0	chr11	106319900	106320204	(28766418)	+	AluSq2	SINE/Alu	1	304	(9)	733392
1226	11.9	0.0	0.0	chr11	106320206	106320365	(28766257)	+	AluSc5	SINE/Alu	132	291	(18)	733393
500	14.8	1.1	1.1	chr11	106320370	106320458	(28766164)	+	MER66C	LTR/ERV1	446	534	(21)	733390
3450	13.3	2.4	0.2	chr11	109184143	109184669	(25901953)	C	MER66C	LTR/ERV1	(16)	539	1	737995
74	11.5	0.0	0.0	chr11	110444651	110444767	(24641855)	+	(TA)n	Simple_repeat	1	117	(0)	739846
1133	18.0	0.5	0.9	chr11	110444769	110444981	(24641641)	+	MER66B	LTR/ERV1	275	486	(0)	739847
654	6.9	0.0	1.0	chr11	110444983	110445084	(24641538)	C	L1P4	LINE/L1	(1488)	4658	4558	739848
697	22.3	3.7	0.6	chr11	111230090	111230247	(23856375)	C	MIR	SINE/MIR	(86)	176	14	741057
16	17.8	7.2	4.0	chr11	111871300	111871377	(23215245)	+	(CGCCG)n	Simple_repeat	1	80	(0)	742108
2354	13.1	0.0	1.0	chr11	112118005	112118310	(22968312)	+	AluSx1	SINE/Alu	1	303	(9)	742576
2535	16.7	1.1	5.1	chr11	113557057	113557549	(21529073)	C	MER66B	LTR/ERV1	(0)	486	14	744762
401	30.0	7.1	3.2	chr11	116441844	116442002	(18644620)	C	MIR3	SINE/MIR	(28)	180	17	749319
239	19.6	0.0	0.0	chr11	116442055	116442100	(18644522)	+	Helitron1Nb_Mam	RC/Helitron	1	46	(1070)	749320
301	28.9	12.2	5.3	chr11	116442122	116442203	(18644419)	C	MamRep1879	DNA/hAT-Tip100?	(11)	205	122	749321
3383	11.7	2.1	0.0	chr11	116442204	116442675	(18643947)	C	MER66D	LTR/ERV1	(0)	484	3	749322
12	13.6	2.8	5.4	chr11	117179036	117179071	(17907551)	+	(CCCT)n	Simple_repeat	1	37	(0)	750694
21	16.4	2.3	0.0	chr11	117179216	117179258	(17907364)	+	(CGC)n	Simple_repeat	1	44	(0)	750695
1296	10.0	1.2	0.0	chr11	118617473	118617642	(16468980)	C	AluSx1	SINE/Alu	(19)	293	122	753246
2688	16.7	4.6	10.2	chr11	119592709	119592848	(15493774)	+	MER41B	LTR/ERV1	360	581	(53)	755141
433	26.3	6.0	5.0	chr11	119592855	119593034	(15493588)	+	HAL1	LINE/L1	115	296	(2211)	755140
2638	15.6	3.7	0.8	chr11	121264849	121265320	(13821302)	+	MER66B	LTR/ERV1	1	486	(0)	757845
915	25.5	5.9	1.2	chr11	121265513	121265837	(13820785)	+	MER66-int	LTR/ERV1	58	398	(6278)	757845
862	25.1	5.5	2.8	chr11	121265821	121266103	(13820519)	+	MER66-int	LTR/ERV1	271	561	(6115)	757845
12	25.6	0.0	0.0	chr11	124876298	124876334	(10210288)	+	G-rich	Low_complexity	1	37	(0)	763704
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
1839	21.1	8.3	12.2	chr11	126872013	126872580	(8214042)	+	MER66C	LTR/ERV1	1	544	(11)	766760
17	12.5	0.0	0.0	chr11	129399366	129399391	(5687231)	+	(TC)n	Simple_repeat	1	26	(0)	770266
586	24.5	0.0	5.8	chr11	129399392	129399499	(5687123)	C	FLAM_A	SINE/Alu	(11)	131	31	770267
2878	15.6	0.8	4.5	chr11	129399500	129400004	(5686618)	C	MER66B	LTR/ERV1	(0)	486	1	770268
2559	7.1	0.0	0.0	chr11	129411991	129412298	(5674324)	+	AluY	SINE/Alu	1	308	(3)	770291
2843	14.0	3.5	0.9	chr11	129412363	129412809	(5673813)	C	MER66B	LTR/ERV1	(0)	486	28	770292
17	16.9	5.1	4.8	chr11	133928066	133928124	(1158498)	+	(AGC)n	Simple_repeat	1	62	(0)	776539
181	12.9	13.9	11.4	chr11	134868794	134868863	(217759)	+	MamRTE1	LINE/RTE-BovB	2370	2441	(1371)	777755
928	26.9	5.6	8.4	chr11	134868968	134869799	(216823)	C	L1MEc	LINE/L1	(1066)	5875	5111	777756
435	29.1	8.4	2.5	chr12	1091670	1091870	(132183439)	C	L2b	LINE/L2	(540)	2879	2666	780090
2494	7.7	0.0	0.0	chr12	1091999	1092296	(132183013)	C	AluSg	SINE/Alu	(12)	298	1	780091
237	20.8	2.0	0.0	chr12	1847599	1847646	(131427663)	+	MER5A	DNA/hAT-Charlie	77	125	(64)	781341
6057	24.7	11.3	6.6	chr12	1847678	1848039	(131427270)	C	L1MC5	LINE/L1	(37)	9267	8884	781342
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
327	34.1	1.5	0.8	chr12	2256139	2256271	(131019038)	+	MER5A	DNA/hAT-Charlie	51	184	(5)	781931
32	11.9	0.0	0.0	chr12	2853573	2853622	(130421687)	+	(TTTTGT)n	Simple_repeat	6	55	(0)	782782
2085	9.9	0.3	0.0	chr12	2854031	2854324	(130420985)	C	AluSp	SINE/Alu	(18)	295	1	782783
15	10.8	3.3	0.0	chr12	4031250	4031279	(129244030)	+	(CCGC)n	Simple_repeat	1	31	(0)	784812
12	29.7	0.0	2.1	chr12	4031354	4031401	(129243908)	+	(GCGCT)n	Simple_repeat	1	48	(0)	784813
12	15.7	6.5	4.1	chr12	4031390	4031435	(129243874)	+	(GCGCC)n	Simple_repeat	1	49	(0)	784814
17	0.0	0.0	0.0	chr12	4605186	4605206	(128670103)	+	(TTG)n	Simple_repeat	1	21	(0)	785779
1203	22.9	4.9	2.0	chr12	4605209	4605564	(128669745)	C	Charlie2b	DNA/hAT-Charlie	(28)	2754	2388	785780
2996	16.3	0.9	9.5	chr12	6297566	6298103	(126977206)	+	MER41D	LTR/ERV1	63	557	(0)	788425
537	20.7	7.1	14.0	chr12	6298113	6298252	(126977057)	+	Zaphod3	DNA/hAT-Tip100	466	615	(2008)	788427
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
22	2.4	9.1	2.1	chr12	6533857	6533900	(126741409)	+	(CCCAGTG)n	Simple_repeat	1	48	(0)	788907
2383	8.7	0.0	0.7	chr12	7970240	7970548	(125304761)	C	AluSx1	SINE/Alu	(5)	307	1	791512
18	0.0	0.0	0.0	chr12	7971309	7971328	(125303981)	+	(TC)n	Simple_repeat	1	20	(0)	791513
17	0.0	0.0	0.0	chr12	7971328	7971346	(125303963)	+	(CA)n	Simple_repeat	1	19	(0)	791514
2681	3.9	0.0	0.7	chr12	8027396	8027704	(125247605)	+	AluY	SINE/Alu	2	308	(3)	791654
188	18.6	2.3	4.4	chr12	9750693	9750737	(123524572)	C	MIR	SINE/MIR	(35)	227	184	794269
239	21.1	5.3	10.1	chr12	12356797	12356875	(120918434)	+	MIRb	SINE/MIR	124	198	(64)	798012
13	10.8	3.1	3.0	chr12	12357357	12357388	(120917921)	+	(TCCCTG)n	Simple_repeat	1	33	(0)	798018
13	8.1	3.9	0.0	chr12	12717774	12717799	(120557510)	+	(TTTGT)n	Simple_repeat	1	27	(0)	798630
28	0.0	0.0	0.0	chr12	19129442	19129468	(114145841)	+	(T)n	Simple_repeat	1	27	(0)	807582
14	16.1	0.0	0.0	chr12	20369562	20369589	(112905720)	+	GA-rich	Low_complexity	1	28	(0)	809558
229	36.4	3.9	0.0	chr12	21370730	21370828	(111904481)	+	MIRc	SINE/MIR	22	124	(144)	810692
2556	15.5	2.9	2.9	chr12	21370854	21371339	(111903970)	C	MER66B	LTR/ERV1	(0)	486	1	810693
2417	16.7	4.2	6.2	chr12	21472271	21472755	(111802554)	C	MER66D	LTR/ERV1	(0)	484	10	810810
1651	9.5	0.0	0.0	chr12	22124898	22125138	(111150171)	+	THE1A-int	LTR/ERVL-MaLR	1	241	(1339)	811674
6913	9.1	1.1	0.0	chr12	22125150	22126107	(111149202)	+	THE1A-int	LTR/ERVL-MaLR	606	1574	(6)	811674
407	35.0	10.6	8.4	chr12	31117578	31118801	(102156508)	C	L1MDa	LINE/L1	(5629)	1004	402	824695
859	12.3	0.7	2.0	chr12	31118894	31119042	(102156267)	+	HERVE-int	LTR/ERV1	3249	3395	(4418)	824696
468	34.1	9.8	8.8	chr12	31119085	31119883	(102155426)	C	L1MDa	LINE/L1	(5663)	970	402	824697
308	32.6	10.8	6.7	chr12	31120007	31120200	(102155109)	C	L1MDa	LINE/L1	(5781)	852	650	824698
914	27.7	8.5	3.8	chr12	31391033	31391620	(101883689)	+	L2a	LINE/L2	2815	3425	(1)	825180
894	23.4	3.1	2.4	chr12	31728301	31728554	(101546755)	C	MIR	SINE/MIR	(0)	262	7	825910
13	31.2	1.0	6.1	chr12	31728865	31728961	(101546348)	+	(GGCGG)n	Simple_repeat	1	98	(0)	825911
328	29.6	0.0	5.3	chr12	31729530	31729661	(101545648)	C	MIRb	SINE/MIR	(16)	252	128	825912
21	15.4	0.0	0.0	chr12	31736791	31736826	(101538483)	+	(AC)n	Simple_repeat	1	36	(0)	825930
2360	16.5	6.7	2.9	chr12	31736894	31736991	(101538318)	C	MER66A	LTR/ERV1	(3)	475	379	825931
2057	14.4	0.3	0.0	chr12	31736992	31737297	(101538012)	C	AluSx1	SINE/Alu	(5)	307	1	825932
2689	5.2	0.0	0.0	chr12	32060227	32060535	(101214774)	+	AluSg7	SINE/Alu	1	309	(0)	826720
1492	27.5	6.1	4.5	chr12	32060536	32060796	(101214513)	C	MER20B	DNA/hAT-Charlie	(517)	266	1	826717
2027	17.2	4.2	4.7	chr12	38857909	38858272	(94417037)	+	MER67C	LTR/ERV1	33	406	(305)	831627
2838	17.6	0.8	0.4	chr12	38858273	38858756	(94416553)	C	MER66B	LTR/ERV1	(0)	486	1	831629
23	3.7	0.0	0.0	chr12	43758666	43758693	(89516616)	+	(CA)n	Simple_repeat	1	28	(0)	838504
201	34.0	2.0	0.0	chr12	45666323	45666372	(87608937)	+	MamTip2	DNA/hAT-Tip100	1	51	(254)	841175
4166	10.6	1.2	0.2	chr12	45666411	45666999	(87608310)	C	MER41E	LTR/ERV1	(0)	595	1	841176
57	26.7	0.8	5.8	chr12	51590947	51591185	(81684124)	+	(GCGG)n	Simple_repeat	1	241	(0)	851612
17	16.5	0.0	0.0	chr12	51591327	51591360	(81683949)	+	(GCC)n	Simple_repeat	1	34	(0)	851613
2008	15.4	0.7	0.0	chr12	52029408	52029699	(81245610)	+	AluJb	SINE/Alu	1	294	(18)	852335
12	11.2	3.2	3.1	chr12	52030153	52030183	(81245126)	+	(TCTCCC)n	Simple_repeat	1	32	(0)	852336
308	24.7	2.2	2.2	chr12	52069134	52069224	(81206085)	C	MIRc	SINE/MIR	(2)	266	176	852393
2082	13.1	0.0	2.9	chr12	53150564	53150875	(80124434)	+	AluSz	SINE/Alu	1	303	(9)	854163
2429	23.6	6.0	5.4	chr12	53150876	53150904	(80124405)	+	L1MC4	LINE/L1	7201	7224	(818)	854157
2352	17.4	5.5	1.5	chr12	53150905	53151370	(80123939)	C	MER66B	LTR/ERV1	(0)	486	1	854164
12	14.9	8.1	0.0	chr12	53371096	53371132	(79904177)	+	(CTCCT)n	Simple_repeat	1	40	(0)	854609
15	21.4	0.0	0.0	chr12	53371585	53371622	(79903687)	+	(TCCCC)n	Simple_repeat	1	38	(0)	854610
13	16.7	4.8	2.3	chr12	53371725	53371766	(79903543)	+	(ACTCTGG)n	Simple_repeat	1	44	(0)	854611
191	19.7	13.4	9.0	chr12	53848386	53848463	(79426846)	+	L2c	LINE/L2	3296	3377	(10)	855550
214	36.5	7.0	1.8	chr12	53848592	53848700	(79426609)	C	L2b	LINE/L2	(18)	3357	3243	855551
2163	11.4	0.7	5.8	chr12	56085463	56085787	(77189522)	+	AluSz	SINE/Alu	1	308	(4)	858889
16	17.3	2.6	0.0	chr12	56158139	56158177	(77117132)	+	(CCCCCGA)n	Simple_repeat	1	40	(0)	858993
2183	12.5	0.0	0.3	chr12	56360580	56360883	(76914426)	C	AluJb	SINE/Alu	(8)	304	2	859381
2460	6.8	0.0	1.3	chr12	56448445	56448753	(76826556)	+	AluSg	SINE/Alu	1	305	(5)	859559
15	20.4	0.0	2.4	chr12	58920321	58920361	(74354948)	+	(CGCTCG)n	Simple_repeat	1	41	(0)	863390
12	16.1	5.7	0.0	chr12	63844435	63844469	(69430840)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	870032
21	17.9	1.8	3.6	chr12	63844633	63844687	(69430622)	+	(TCC)n	Simple_repeat	1	56	(0)	870033
13	16.7	4.8	2.3	chr12	69470606	69470647	(63804662)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	879354
31	0.0	2.7	2.6	chr12	71755136	71755172	(61520137)	+	(GCG)n	Simple_repeat	1	38	(0)	882813
12	7.8	3.2	6.2	chr12	76879075	76879105	(56396204)	+	(CCGCC)n	Simple_repeat	1	32	(0)	889997
938	24.9	0.5	4.0	chr12	84727834	84728059	(48547250)	+	MER20	DNA/hAT-Charlie	2	219	(0)	900651
562	23.9	3.5	2.1	chr12	84728091	84728231	(48547078)	+	MER65D	LTR/ERV1	5	147	(326)	900652
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
2629	18.5	1.0	0.6	chr12	88331856	88332339	(44942970)	C	MER66B	LTR/ERV1	(0)	486	1	905365
686	33.7	3.9	0.8	chr12	93732902	93733149	(39542160)	+	MIRb	SINE/MIR	13	268	(0)	914037
21	26.4	2.0	5.8	chr12	93733715	93733737	(39541572)	+	(TTCC)n	Simple_repeat	1	24	(0)	914038
2975	10.8	7.6	0.0	chr12	95628914	95629349	(37645960)	C	MER4A1	LTR/ERV1	(0)	472	1	917622
2237	15.4	12.1	4.7	chr12	95629350	95629421	(37645888)	+	MER66B	LTR/ERV1	419	486	(0)	917619
204	28.4	5.0	8.7	chr12	95943038	95943141	(37332168)	+	MIRb	SINE/MIR	71	170	(98)	918160
2013	15.0	7.4	4.5	chr12	99998645	99998844	(33276465)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	178	924687
2776	0.0	0.0	0.0	chr12	99998845	99999164	(33276145)	C	AluYa5	SINE/Alu	(0)	311	1	924688
14	20.4	3.9	7.4	chr12	101697808	101697885	(31577424)	+	(CCAGGCG)n	Simple_repeat	1	81	(0)	927780
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
2630	13.6	9.0	0.5	chr12	104361468	104361904	(28913405)	+	MER66A	LTR/ERV1	1	478	(0)	932403
612	24.3	6.0	2.1	chr12	104361905	104362079	(28913230)	+	Helitron1Na_Mam	RC/Helitron	849	1030	(32)	932402
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
1968	21.9	3.9	1.6	chr12	105567799	105568249	(27707060)	+	MLT1C	LTR/ERVL-MaLR	1	462	(5)	934615
1983	11.6	23.9	7.6	chr12	105568275	105568412	(27706897)	C	MER66C	LTR/ERV1	(12)	543	366	934616
2212	12.5	0.0	0.3	chr12	105568413	105568716	(27706593)	+	AluSx1	SINE/Alu	1	303	(9)	934617
213	27.4	15.7	0.0	chr12	106955106	106955229	(26320080)	C	L2a	LINE/L2	(9)	3417	3271	937151
319	35.0	0.0	2.4	chr12	108562068	108562190	(24713119)	C	MIRb	SINE/MIR	(111)	157	38	940536
283	33.3	4.7	3.1	chr12	108562160	108562286	(24713023)	+	MIR	SINE/MIR	28	156	(106)	940537
13	22.8	5.9	0.0	chr12	109154601	109154651	(24120658)	+	G-rich	Low_complexity	1	54	(0)	941880
14	17.6	0.0	4.8	chr12	109309737	109309778	(23965531)	+	(GGCGCGG)n	Simple_repeat	1	42	(0)	942260
1156	9.8	0.0	0.0	chr12	110613713	110613865	(22661444)	C	AluSx4	SINE/Alu	(2)	308	156	945134
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
2339	20.5	5.6	3.5	chr12	112559595	112560139	(20715170)	+	MER41B	LTR/ERV1	1	607	(27)	949539
206	11.4	0.0	2.8	chr12	112560159	112560194	(20715115)	+	L2b	LINE/L2	3326	3360	(15)	949540
2087	14.2	0.0	0.0	chr12	112560242	112560536	(20714773)	C	AluJb	SINE/Alu	(17)	295	1	949541
3002	15.7	2.9	0.0	chr12	113026303	113026774	(20248535)	C	MER66B	LTR/ERV1	(0)	486	1	950611
2471	8.3	0.8	6.0	chr12	113033202	113033400	(20241909)	+	THE1B	LTR/ERVL-MaLR	180	364	(0)	950629
501	4.7	0.0	0.0	chr12	113033401	113033464	(20241845)	+	MER66B	LTR/ERV1	423	486	(0)	950628
3805	16.1	3.0	1.4	chr12	113033476	113033745	(20241564)	+	L1MB4	LINE/L1	5196	5466	(714)	950626
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
1598	11.5	4.8	0.0	chr12	115433756	115433972	(17841337)	C	MER30	DNA/hAT-Charlie	(2)	228	1	956003
508	25.8	7.6	3.0	chr12	115434037	115434200	(17841109)	+	MIR3	SINE/MIR	7	178	(30)	956004
2270	10.7	1.6	0.7	chr12	116406221	116406529	(16868780)	C	AluSx1	SINE/Alu	(0)	312	1	957955
233	26.1	9.6	7.8	chr12	116406968	116407059	(16868250)	C	L1ME4a	LINE/L1	(0)	6124	6038	957956
300	24.6	0.0	0.0	chr12	116533044	116533108	(16742201)	+	MIRc	SINE/MIR	138	202	(66)	958307
16	24.0	0.0	5.1	chr12	116533329	116533387	(16741922)	+	(CGCCC)n	Simple_repeat	1	59	(0)	958308
172	15.9	4.9	4.2	chr12	116737305	116737777	(16537532)	+	GA-rich	Low_complexity	1	496	(0)	958800
19	14.8	3.5	5.0	chr12	116737904	116737961	(16537348)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	958801
1979	10.5	7.1	0.0	chr12	116797278	116797553	(16477756)	+	AluSz	SINE/Alu	1	297	(15)	958953
1276	15.3	3.0	3.4	chr12	116797554	116797580	(16477729)	+	MLT1B	LTR/ERVL-MaLR	102	128	(262)	958952
2429	17.8	2.7	3.3	chr12	116797581	116798069	(16477240)	C	MER66B	LTR/ERV1	(0)	486	1	958954
1894	12.5	4.9	0.0	chr12	116891466	116891754	(16383555)	+	AluSq	SINE/Alu	2	305	(8)	959216
508	23.4	12.8	10.3	chr12	116891755	116891788	(16383521)	C	MLT1J	LTR/ERVL-MaLR	(18)	494	465	959215
2419	18.7	1.0	3.6	chr12	116891789	116892287	(16383022)	C	MER66B	LTR/ERV1	(0)	486	1	959217
533	19.8	3.5	3.8	chr12	118164937	118165074	(15110235)	C	L2a	LINE/L2	(0)	3426	3251	962009
3065	16.0	0.8	0.4	chr12	119355528	119356011	(13919298)	C	MER66B	LTR/ERV1	(0)	486	1	964594
2667	14.5	4.7	0.6	chr12	119466824	119467289	(13808020)	+	MER66B	LTR/ERV1	1	486	(0)	964855
1734	18.2	5.5	6.4	chr12	119467290	119467330	(13807979)	+	LTR52	LTR/ERVL	348	384	(37)	964854
1639	17.5	6.7	3.3	chr12	119467331	119467691	(13807618)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	964856
1901	13.1	0.3	1.4	chr12	121210498	121210794	(12064515)	+	AluJr	SINE/Alu	1	294	(18)	968859
34	0.0	0.0	0.0	chr12	121478867	121478895	(11796414)	+	(TG)n	Simple_repeat	1	29	(0)	969469
1855	15.8	0.3	1.0	chr12	121478896	121479010	(11796299)	C	AluJb	SINE/Alu	(190)	122	7	969468
2443	4.2	0.0	5.8	chr12	121479168	121479479	(11795830)	+	AluYm1	SINE/Alu	1	294	(17)	969470
21	20.4	0.0	0.0	chr12	123436354	123436401	(9838908)	+	(CCT)n	Simple_repeat	1	48	(0)	974082
593	24.2	3.7	3.2	chr12	123437126	123437313	(9837996)	+	MIRb	SINE/MIR	66	254	(14)	974083
3629	13.6	2.0	0.0	chr12	124151464	124151993	(9123316)	C	MER66C	LTR/ERV1	(14)	541	1	975565
497	29.1	11.3	1.6	chr12	124746375	124746566	(8528743)	+	MIR	SINE/MIR	50	262	(0)	976734
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
248	21.8	1.3	3.7	chr12	124940188	124940268	(8335041)	C	MER5A	DNA/hAT-Charlie	(63)	126	48	977202
1847	26.9	9.9	1.3	chr12	124992683	124993439	(8281870)	C	L1MC5a	LINE/L1	(325)	2452	1624	977331
274	32.0	10.9	1.6	chr12	125183835	125184001	(8091308)	C	MIRc	SINE/MIR	(74)	194	11	977726
2705	14.5	4.9	0.7	chr12	127079278	127079742	(6195567)	C	MER66B	LTR/ERV1	(0)	486	1	980893
3206	15.2	0.2	0.6	chr12	127991580	127992067	(5283242)	+	MER66B	LTR/ERV1	1	486	(0)	982405
205	30.2	16.9	2.9	chr12	127992068	127992156	(5283153)	+	MIRb	SINE/MIR	163	268	(0)	982404
2905	15.2	2.3	1.7	chr12	129845694	129846168	(3429141)	C	MER66A	LTR/ERV1	(0)	478	1	985738
485	23.8	12.6	6.8	chr12	130031849	130032100	(3243209)	C	LTR106_Mam	LTR	(3)	705	437	986049
2546	15.2	9.3	0.5	chr12	130313359	130313801	(2961508)	+	MER66B	LTR/ERV1	1	486	(0)	986538
2190	12.2	3.2	0.0	chr12	130313899	130314201	(2961108)	+	AluSq2	SINE/Alu	1	313	(0)	986539
48	26.1	3.5	2.8	chr12	132274753	132274925	(1000384)	+	(AC)n	Simple_repeat	1	179	(0)	989284
15	18.1	0.0	0.0	chr12	132275567	132275598	(999711)	+	(TCCC)n	Simple_repeat	1	32	(0)	989285
1611	23.9	9.7	6.4	chr12	132955038	132955650	(319659)	C	MER92B	LTR/ERV1	(0)	636	1	990229
911	17.5	0.0	6.2	chr12	132956529	132956705	(318604)	C	AluJo	SINE/Alu	(10)	302	137	990230
1430	16.8	4.7	5.6	chr12	132956755	132956928	(318381)	C	LTR7B	LTR/ERV1	(0)	464	299	990231
2699	3.3	0.0	0.3	chr12	132956929	132957233	(318076)	C	AluY	SINE/Alu	(7)	304	1	990232
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
22	3.8	0.0	0.0	chr12	133081345	133081371	(193938)	+	(AT)n	Simple_repeat	1	27	(0)	990481
577	12.5	7.5	5.8	chr12	133081374	133081477	(193832)	C	AluJr4	SINE/Alu	(14)	298	193	990482
325	28.4	17.3	0.0	chr13	20525267	20525414	(93838914)	+	MIRb	SINE/MIR	55	233	(35)	994394
16	11.8	3.8	7.3	chr13	20525592	20525651	(93838677)	+	G-rich	Low_complexity	1	57	(0)	994395
2175	18.9	10.3	3.6	chr13	22629399	22629902	(91734426)	+	MER66C	LTR/ERV1	1	542	(13)	997698
211	29.8	3.1	5.0	chr13	24053461	24053559	(90310769)	+	MIR3	SINE/MIR	85	181	(27)	999717
1841	13.6	5.4	0.4	chr13	24423682	24423961	(89940367)	C	AluJr	SINE/Alu	(16)	296	2	1000252
624	17.1	0.8	11.4	chr13	24423985	24424124	(89940204)	C	AluJo	SINE/Alu	(187)	125	1	1000253
928	21.7	10.6	3.4	chr13	24424170	24424518	(89939810)	C	L1MC5a	LINE/L1	(260)	2517	2141	1000254
19	0.0	0.0	0.0	chr13	27620497	27620520	(86743808)	+	(CGC)n	Simple_repeat	1	24	(0)	1005251
600	21.5	1.1	3.9	chr13	29585396	29585574	(84778754)	+	MER112	DNA/hAT-Charlie	86	259	(2)	1008338
742	33.4	7.3	8.4	chr13	29953758	29954492	(84409836)	+	L3	LINE/CR1	3353	4078	(21)	1008878
18	27.4	1.3	4.0	chr13	30464650	30464724	(83899604)	+	(CCG)n	Simple_repeat	1	76	(0)	1009735
31	0.0	0.0	0.0	chr13	30464762	30464788	(83899540)	+	(TG)n	Simple_repeat	1	27	(0)	1009736
18	22.8	3.6	0.0	chr13	30464807	30464814	(83899514)	+	(GCGCGG)n	Simple_repeat	1	23	(35)	1009737
14	13.2	0.0	7.7	chr13	30464815	30464853	(83899475)	+	(GCG)n	Simple_repeat	1	39	(0)	1009738
18	22.8	3.6	0.0	chr13	30464854	30464862	(83899466)	+	(GCGCGG)n	Simple_repeat	24	58	(0)	1009737
12	15.5	3.5	0.0	chr13	30464885	30464913	(83899415)	+	G-rich	Low_complexity	1	30	(0)	1009739
15	11.7	0.0	0.0	chr13	30464913	30464940	(83899388)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1009740
15	28.6	1.5	2.9	chr13	30464956	30465022	(83899306)	+	(CCGC)n	Simple_repeat	1	68	(0)	1009741
12	9.2	0.0	4.0	chr13	30465086	30465110	(83899218)	+	(CGCC)n	Simple_repeat	1	25	(0)	1009742
417	35.7	5.5	10.5	chr13	31971001	31971382	(82392946)	+	L2b	LINE/L2	3014	3375	(0)	1012091
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
24	23.4	3.9	1.2	chr13	42272049	42272132	(72092196)	+	(GCG)n	Simple_repeat	1	86	(0)	1027115
245	13.7	5.5	0.0	chr13	44374530	44374580	(69989748)	+	L2b	LINE/L2	3322	3375	(0)	1030201
2158	11.4	0.3	4.9	chr13	45235580	45235904	(69128424)	C	AluSx1	SINE/Alu	(2)	310	1	1031848
183	32.7	5.3	5.3	chr13	45236107	45236219	(69128109)	+	MamTip2	DNA/hAT-Tip100	40	152	(153)	1031849
340	29.3	9.1	0.6	chr13	45236228	45236409	(69127919)	+	CR1_Mam	LINE/CR1	1318	1516	(688)	1031850
2501	12.6	16.5	0.7	chr13	46405516	46405972	(67958356)	+	MER66C	LTR/ERV1	1	544	(11)	1033857
2573	27.1	10.7	0.8	chr13	46636577	46637916	(67726412)	+	L2a	LINE/L2	1928	3420	(6)	1034229
2006	18.4	7.1	2.2	chr13	46911676	46912182	(67452146)	C	L1ME3A	LINE/L1	(16)	6157	5624	1034617
237	26.9	2.0	12.7	chr13	46912246	46912326	(67452002)	+	MER5B	DNA/hAT-Charlie	31	104	(74)	1034618
1833	20.3	11.6	1.1	chr13	46912327	46912759	(67451569)	C	MER66B	LTR/ERV1	(0)	486	3	1034619
541	22.2	6.9	3.8	chr13	46962625	46962807	(67401521)	+	LTR50	LTR/ERVL	15	203	(592)	1034680
485	35.5	3.2	1.1	chr13	46962819	46963000	(67401328)	C	MIRb	SINE/MIR	(82)	186	1	1034681
3801	14.1	0.0	0.2	chr13	49821470	49822022	(64542306)	+	MER66C	LTR/ERV1	1	552	(3)	1039118
4160	19.4	8.1	2.3	chr13	49822157	49824090	(64540238)	+	MER66-int	LTR/ERV1	65	2169	(4507)	1039118
13	19.7	0.0	6.5	chr13	49936438	49936483	(64427845)	+	G-rich	Low_complexity	1	46	(0)	1039354
75	15.5	4.7	4.1	chr13	49996819	49997027	(64367301)	+	G-rich	Low_complexity	1	210	(0)	1039473
1015	20.5	1.8	0.4	chr13	50529757	50529981	(63834347)	+	L1ME1	LINE/L1	5952	6179	(0)	1040258
20	20.4	0.0	0.0	chr13	51323722	51323766	(63040562)	+	(TGAA)n	Simple_repeat	1	45	(0)	1041402
1627	22.8	9.1	7.5	chr13	52651261	52651995	(61712333)	+	L1M5	LINE/L1	4048	4795	(1351)	1043444
13	22.1	4.1	2.0	chr13	52652663	52652711	(61711617)	+	G-rich	Low_complexity	1	51	(0)	1043445
1222	27.5	9.4	6.3	chr13	59201849	59202341	(55161987)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	40	1051734
6074	15.9	5.2	2.1	chr13	62135763	62137460	(52226868)	+	MER4-int	LTR/ERV1	3837	5506	(757)	1055618
2730	21.3	7.0	1.0	chr13	62137461	62138400	(52225928)	+	LTR28C	LTR/ERV1	1	1067	(62)	1055624
4651	13.6	3.0	3.7	chr13	62138405	62139266	(52225062)	+	MER4-int	LTR/ERV1	5706	6561	(37)	1055618
1521	30.3	8.5	2.3	chr13	63909445	63910411	(50453917)	C	L1MEa	LINE/L1	(5097)	1103	26	1057877
2563	18.2	1.6	1.0	chr13	63910438	63910920	(50453408)	C	MER66B	LTR/ERV1	(0)	486	1	1057878
2663	17.1	1.0	2.0	chr13	64183681	64184171	(50180157)	+	MER66B	LTR/ERV1	1	486	(0)	1058215
198	36.0	12.4	3.9	chr13	64184172	64184205	(50180123)	+	L2	LINE/L2	2828	2862	(557)	1058214
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
3614	17.5	17.8	5.7	chr13	67415684	67416618	(46947710)	+	LTR27E	LTR/ERV1	1	1073	(4)	1062246
490	28.1	11.6	4.8	chr13	67416619	67416874	(46947454)	+	L1MEi	LINE/L1	1108	1390	(822)	1062245
9020	13.2	9.3	0.5	chr13	70489920	70491403	(43872925)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	1066203
10389	6.2	7.3	0.1	chr13	70511008	70512471	(43851857)	C	LTR12C	LTR/ERV1	(0)	1579	2	1066231
382	28.9	15.4	0.6	chr13	73171821	73172007	(41192321)	C	MIRb	SINE/MIR	(10)	258	34	1070091
54	0.0	0.0	0.0	chr13	74287350	74287395	(40076933)	+	(GA)n	Simple_repeat	1	46	(0)	1071768
911	22.8	13.0	3.8	chr13	75538434	75538830	(38825498)	C	L1MC4	LINE/L1	(0)	8042	7604	1073517
10725	12.7	2.3	0.6	chr13	76959221	76960822	(37403506)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	1075506
6021	14.9	11.4	0.2	chr13	79393528	79394632	(34969696)	+	MER50-int	LTR/ERV1	1	1231	(5974)	1078857
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
392	31.6	2.9	0.7	chr13	84645399	84645535	(29718793)	C	MIRb	SINE/MIR	(103)	165	26	1085510
3156	11.9	7.8	0.0	chr13	84645549	84646045	(29718283)	C	MER66C	LTR/ERV1	(14)	541	3	1085511
2839	25.1	6.0	5.8	chr13	84845927	84847583	(29516745)	+	L1M4b	LINE/L1	11	2373	(4494)	1085767
2006	17.6	3.1	13.4	chr13	85041007	85041255	(29323073)	C	MER66B	LTR/ERV1	(0)	486	282	1086014
2460	9.9	0.0	0.0	chr13	85041256	85041568	(29322760)	C	AluSq10	SINE/Alu	(0)	313	1	1086015
10356	12.4	2.1	0.0	chr13	86516623	86518168	(27846160)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1087839
439	24.0	1.6	6.7	chr13	87810379	87810512	(26553816)	C	HUERS-P2-int	LTR/ERV1	(2961)	127	1	1089499
4769	13.2	1.9	2.4	chr13	87810513	87811351	(26552977)	C	LTR1A2	LTR/ERV1	(0)	837	3	1089499
837	23.6	1.1	0.6	chr13	88152976	88153158	(26211170)	C	MER66-int	LTR/ERV1	(6278)	398	215	1089952
2109	19.4	5.6	3.8	chr13	88153367	88153843	(26210485)	C	MER66B	LTR/ERV1	(0)	486	1	1089952
1783	32.5	9.4	5.6	chr13	88407636	88408641	(25955687)	+	ERV3-16A3_I-int	LTR/ERVL	3404	4430	(796)	1090271
1890	20.4	4.1	7.4	chr13	88408642	88409144	(25955184)	C	MER66B	LTR/ERV1	(0)	486	1	1090273
2675	13.5	2.3	5.6	chr13	89571498	89572000	(24792328)	+	LTR19A	LTR/ERV1	1	486	(0)	1091778
1739	24.2	4.1	4.0	chr13	91406364	91406893	(22957435)	+	LTR55	LTR/ERVL?	1	531	(17)	1094205
2207	19.9	0.8	6.0	chr13	91714772	91715284	(22649044)	C	MER66B	LTR/ERV1	(0)	486	1	1094648
594	20.4	10.2	0.0	chr13	94548873	94549004	(19815324)	C	MER5A	DNA/hAT-Charlie	(42)	147	1	1098497
661	1.4	0.0	0.0	chr13	94549650	94549722	(19814606)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1098498
11	21.6	0.0	4.9	chr13	111154010	111154050	(3210278)	+	G-rich	Low_complexity	1	41	(0)	1122233
2592	27.3	7.3	5.0	chr13	114045548	114046226	(318102)	+	L1M5	LINE/L1	4129	4801	(1345)	1125209
2173	21.4	1.9	8.4	chr13	114046227	114046747	(317581)	C	MER66B	LTR/ERV1	(0)	486	1	1125210
2592	26.9	6.6	3.9	chr13	114046748	114047654	(316674)	+	L1M5	LINE/L1	4802	5745	(434)	1125209
12	20.4	0.0	6.7	chr14	24442282	24442326	(82601392)	+	(GCCCC)n	Simple_repeat	1	45	(0)	1134266
310	14.9	9.5	0.0	chr14	24802640	24802706	(82241012)	C	L1M	LINE/L1	(2458)	5424	5351	1134679
525	34.4	11.4	2.5	chr14	24802775	24803179	(82240539)	C	L2a	LINE/L2	(19)	3407	2962	1134680
3532	13.3	1.0	5.9	chr14	26378599	26379208	(80664510)	C	MER66C	LTR/ERV1	(13)	542	1	1136727
25	27.1	2.3	1.1	chr14	28764445	28764463	(78279255)	+	GA-rich	Low_complexity	1	58	(31)	1139684
12	23.7	0.0	8.3	chr14	28764464	28764523	(78279195)	+	G-rich	Low_complexity	1	60	(0)	1139685
7706	9.2	1.1	0.2	chr14	35033780	35034802	(72008916)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	549	1149213
1915	9.8	0.4	0.4	chr14	35034803	35035048	(72008670)	C	AluSp	SINE/Alu	(18)	295	50	1149214
882	28.9	11.0	1.9	chr14	36128696	36129154	(70914564)	+	LTR33	LTR/ERVL	2	503	(12)	1151192
1038	20.9	1.3	9.4	chr14	36129155	36129408	(70914310)	+	LTR16A1	LTR/ERVL	1	233	(223)	1151193
585	29.6	10.8	0.6	chr14	36129411	36129757	(70913961)	+	L1ME3Cz	LINE/L1	4689	5075	(1071)	1151194
16	15.3	0.0	2.6	chr14	39102972	39103024	(67940694)	+	(CCCCAGC)n	Simple_repeat	1	51	(0)	1155115
45	4.1	0.0	0.0	chr14	39432565	39432614	(67611104)	+	(GCGGG)n	Simple_repeat	1	50	(0)	1155724
1576	22.0	12.2	8.6	chr14	43875343	43875855	(63167863)	+	MER66C	LTR/ERV1	1	534	(21)	1161029
610	28.2	7.2	2.2	chr14	43875920	43876038	(63167680)	+	LTR16A1	LTR/ERVL	202	332	(124)	1161028
1108	27.6	4.9	3.7	chr14	43876039	43876421	(63167297)	+	MLT1B	LTR/ERVL-MaLR	1	388	(2)	1161030
1680	14.1	6.7	0.0	chr14	45253801	45254063	(61789655)	C	AluJb	SINE/Alu	(30)	282	1	1162926
1044	24.9	7.3	5.0	chr14	48237895	48238022	(58805696)	+	MLT1E1A	LTR/ERVL-MaLR	268	399	(281)	1166551
2566	18.2	1.4	1.0	chr14	48238023	48238506	(58805212)	C	MER66B	LTR/ERV1	(0)	486	1	1166552
2332	7.0	0.7	0.0	chr14	49687713	49687997	(57355721)	C	AluSc	SINE/Alu	(22)	287	1	1168415
13	29.7	1.5	3.0	chr14	49688218	49688282	(57355436)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1168416
280	33.5	12.0	5.4	chr14	49750196	49750473	(57293245)	+	L2c	LINE/L2	2921	3219	(168)	1168564
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
241	29.2	14.8	3.6	chr14	51298763	51298929	(55744789)	+	MIRb	SINE/MIR	77	265	(3)	1171264
81	14.1	1.1	5.0	chr14	52113633	52113804	(54929914)	+	A-rich	Low_complexity	7	172	(0)	1172476
524	33.2	6.0	2.6	chr14	52113948	52114299	(54929419)	+	L4_C_Mam	LINE/RTE-X	1286	1650	(3488)	1172473
1966	16.5	2.3	1.2	chr14	52656949	52657285	(54386433)	+	MER66B	LTR/ERV1	1	341	(145)	1173257
334	15.1	0.0	0.0	chr14	52657293	52657345	(54386373)	+	MER66B	LTR/ERV1	469	521	(34)	1173257
253	20.0	0.0	0.0	chr14	52657345	52657389	(54386329)	+	AluJb	SINE/Alu	240	284	(18)	1173256
16	11.7	0.0	0.0	chr14	52657390	52657417	(54386301)	+	(TCAA)n	Simple_repeat	1	28	(0)	1173258
12	16.9	2.9	2.8	chr14	53153332	53153366	(53890352)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1174114
13	15.1	5.1	2.4	chr14	57268730	57268768	(49774950)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1180525
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
468	20.7	0.0	0.0	chr14	60165538	60165624	(46878094)	+	AluSz	SINE/Alu	48	134	(178)	1184650
2250	6.9	0.4	0.4	chr14	61188740	61189014	(45854704)	C	AluSq	SINE/Alu	(33)	280	6	1186118
24	16.2	4.1	0.0	chr14	61189503	61189551	(45854167)	+	(TC)n	Simple_repeat	1	51	(0)	1186119
2900	18.0	0.4	0.6	chr14	65167128	65167614	(41876104)	+	MER66B	LTR/ERV1	1	486	(0)	1192564
418	31.9	1.4	2.1	chr14	65167615	65167640	(41876078)	C	LTR16B1	LTR/ERVL	(456)	24	1	1192563
200	26.7	4.2	12.6	chr14	65167714	65167816	(41875902)	+	MIR	SINE/MIR	41	134	(128)	1192565
1086	14.6	2.4	0.0	chr14	65167826	65167989	(41875729)	C	AluSx1	SINE/Alu	(1)	311	144	1192566
447	22.4	4.1	2.5	chr14	67673960	67674078	(39369640)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	385	1196533
261	35.8	8.4	1.4	chr14	71204328	71204605	(35839113)	C	L2c	LINE/L2	(1489)	1930	1632	1202380
2722	16.5	4.1	1.5	chr14	71204766	71205238	(35838480)	C	MER66B	LTR/ERV1	(0)	486	1	1202384
3528	12.0	4.0	0.0	chr14	74742471	74742978	(32300740)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1209078
1127	19.5	4.3	5.8	chr14	74742979	74743118	(32300600)	+	L1ME1	LINE/L1	5758	5897	(282)	1209066
374	15.6	1.5	0.0	chr14	74743123	74743186	(32300532)	+	MER47C	DNA/TcMar-Tigger	1	65	(32)	1209079
372	15.7	2.2	18.4	chr14	74743183	74743239	(32300479)	+	Tigger5b	DNA/TcMar-Tigger	381	428	(44)	1209080
874	13.8	0.8	0.8	chr14	74743240	74743369	(32300349)	+	AluJo	SINE/Alu	1	130	(182)	1209081
372	15.7	2.2	18.4	chr14	74743370	74743420	(32300298)	+	Tigger5b	DNA/TcMar-Tigger	429	471	(1)	1209080
297	23.0	5.4	3.3	chr14	76872776	76872865	(30170853)	+	MamRep1879	DNA/hAT-Tip100?	110	201	(15)	1213102
11	24.6	0.0	2.5	chr14	76913439	76913478	(30130240)	+	(CCCAGG)n	Simple_repeat	1	40	(0)	1213194
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
2534	16.1	1.0	10.3	chr14	85858604	85859137	(21184581)	+	MER66D	LTR/ERV1	1	484	(0)	1226854
3425	11.9	2.0	0.4	chr14	88831032	88831570	(18212148)	+	MER66C	LTR/ERV1	1	548	(7)	1231041
249	17.3	4.5	5.3	chr14	88831571	88831669	(18212049)	+	MIR	SINE/MIR	119	219	(49)	1231042
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
12	18.6	5.4	0.0	chr14	90383659	90383695	(16660023)	+	(TCGCCCT)n	Simple_repeat	1	39	(0)	1233810
12	19.2	3.2	7.8	chr14	93430409	93430470	(13613248)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	1239454
13	20.9	0.0	0.0	chr14	93430903	93430935	(13612783)	+	G-rich	Low_complexity	1	33	(0)	1239455
277	18.0	0.0	0.0	chr14	93868444	93868493	(13175225)	+	MER72	LTR/ERV1	15	64	(658)	1240174
2622	17.8	2.7	0.8	chr14	93868494	93868964	(13174754)	C	MER66B	LTR/ERV1	(0)	486	7	1240175
3792	19.0	5.3	1.6	chr14	93868963	93869783	(13173935)	+	MER49	LTR/ERV1	38	884	(39)	1240176
268	25.0	2.9	0.0	chr14	94486116	94486183	(12557535)	+	MIRc	SINE/MIR	81	150	(118)	1241215
677	32.2	4.3	6.0	chr14	95326721	95326777	(11716941)	+	MLT1H1	LTR/ERVL-MaLR	34	90	(479)	1242785
2723	18.4	0.4	1.2	chr14	95326778	95327267	(11716451)	C	MER66B	LTR/ERV1	(0)	486	1	1242786
23	0.0	0.0	0.0	chr14	99234856	99234880	(7808838)	+	(A)n	Simple_repeat	1	25	(0)	1249715
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
2938	17.1	0.0	0.4	chr14	101704168	101704655	(5339063)	+	MER66B	LTR/ERV1	1	486	(0)	1253518
3393	24.1	7.3	2.8	chr14	101704656	101704696	(5339022)	+	L1MEg	LINE/L1	4982	5022	(1124)	1253503
1066	16.3	0.0	3.9	chr14	101704755	101704960	(5338758)	C	AluSx	SINE/Alu	(0)	312	131	1253519
756	17.3	0.8	1.6	chr14	102524471	102524597	(4519121)	C	AluJr	SINE/Alu	(186)	126	1	1255086
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
14	11.7	0.0	3.3	chr14	103075814	103075843	(3967875)	+	(CCGCT)n	Simple_repeat	1	30	(0)	1256158
12	18.8	2.6	2.6	chr14	103075866	103075903	(3967815)	+	(CCGCAG)n	Simple_repeat	1	39	(0)	1256159
2297	7.9	0.6	2.5	chr14	103075955	103076272	(3967446)	+	AluSx1	SINE/Alu	1	312	(0)	1256160
1946	11.3	1.4	2.7	chr14	103076287	103076441	(3967277)	C	AluSg	SINE/Alu	(21)	289	134	1256161
2242	11.9	0.0	0.0	chr14	104528946	104529238	(2514480)	+	AluSx	SINE/Alu	3	295	(17)	1258520
2230	18.5	6.4	4.6	chr14	104529239	104529466	(2514252)	+	MER66B	LTR/ERV1	263	486	(0)	1258519
904	18.1	0.7	0.0	chr14	104529562	104529705	(2514013)	+	AluJb	SINE/Alu	137	281	(31)	1258521
3664	21.5	5.0	2.6	chr14	104748812	104749690	(2294028)	+	MER54A	LTR/ERVL	1	901	(0)	1258773
675	10.6	1.7	0.9	chr14	104749771	104749884	(2293834)	C	MER66C	LTR/ERV1	(14)	541	427	1258774
13	21.7	0.0	7.3	chr14	105093393	105093447	(1950271)	+	G-rich	Low_complexity	1	55	(0)	1259234
23	7.5	12.5	0.0	chr14	105093493	105093548	(1950170)	+	(CCCGCGC)n	Simple_repeat	1	63	(0)	1259235
13	18.2	6.6	4.6	chr14	105093885	105093945	(1949773)	+	G-rich	Low_complexity	1	65	(0)	1259236
12	20.1	4.7	6.0	chr14	105094007	105094070	(1949648)	+	(CGGAGC)n	Simple_repeat	1	67	(0)	1259237
2712	19.2	3.5	0.4	chr14	105100749	105101219	(1942499)	+	MER66B	LTR/ERV1	1	486	(0)	1259252
739	26.7	4.6	5.6	chr14	105101220	105101317	(1942401)	C	L1ME4b	LINE/L1	(426)	466	371	1259250
367	29.6	8.6	5.7	chr14	105101307	105101580	(1942138)	C	L1M5	LINE/L1	(1583)	4563	4291	1259253
812	21.6	2.9	5.7	chr14	105188230	105188376	(1855342)	C	HAL1	LINE/L1	(782)	1725	1587	1259370
2041	13.1	1.7	0.7	chr14	105188377	105188667	(1855051)	+	AluSx3	SINE/Alu	1	294	(17)	1259371
3091	14.1	1.0	0.2	chr15	25882856	25883337	(76107852)	+	MER66B	LTR/ERV1	1	486	(0)	1270660
2136	23.2	5.5	3.0	chr15	25883338	25883849	(76107340)	+	L1ME2	LINE/L1	5734	6265	(72)	1270655
1046	21.9	19.6	0.5	chr15	29682250	29682647	(72308542)	+	MER66C	LTR/ERV1	61	540	(15)	1275866
475	34.4	7.5	5.6	chr15	29682682	29683125	(72308064)	C	L1M4	LINE/L1	(410)	5714	5262	1275867
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
1790	17.7	4.1	3.9	chr15	32016434	32016982	(69974207)	+	MLT2A2	LTR/ERVL	1	554	(0)	1279318
590	30.1	5.6	2.3	chr15	32016987	32017329	(69973860)	+	HAL1M8	LINE/L1	286	640	(2351)	1279315
1363	26.7	12.8	1.3	chr15	32017341	32017932	(69973257)	C	MLT2F	LTR/ERVL	(2)	661	1	1279319
409	26.6	0.9	0.0	chr15	48975601	48975709	(53015480)	+	L1ME2z	LINE/L1	6335	6444	(0)	1305617
28138	2.4	0.1	0.1	chr15	51031622	51037649	(50953540)	C	L1PA3	LINE/L1	(0)	6155	127	1308955
1002	13.3	2.4	0.0	chr15	51037650	51037814	(50953375)	C	L1M1	LINE/L1	(7383)	182	14	1308953
11113	16.8	2.3	2.0	chr15	51037816	51039730	(50951459)	C	L1M2	LINE/L1	(4929)	1920	1	1308956
2722	19.3	15.3	1.2	chr15	58270015	58270659	(43720530)	+	LTR41B	LTR/ERVL	6	757	(1)	1319877
889	25.1	4.0	4.7	chr15	58272459	58272734	(43718455)	+	L1MEg	LINE/L1	3	276	(6176)	1319879
553	22.0	5.6	4.1	chr15	58272767	58272889	(43718300)	+	L1MEg	LINE/L1	347	471	(5981)	1319879
17	11.2	0.0	0.0	chr15	58749538	58749566	(43241623)	+	(CCG)n	Simple_repeat	1	29	(0)	1320716
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
937	16.9	6.0	2.0	chr15	62406108	62406313	(39584876)	C	MLT1B	LTR/ERVL-MaLR	(0)	467	196	1326852
2291	19.3	2.2	2.8	chr15	62406314	62406776	(39584413)	C	MER66B	LTR/ERV1	(0)	486	27	1326853
770	11.1	1.7	0.0	chr15	63382162	63382278	(38608911)	C	LTR8	LTR/ERV1	(0)	691	573	1328439
396	30.6	2.2	0.7	chr15	65401262	65401396	(36589793)	+	MIR3	SINE/MIR	23	159	(49)	1332535
11	9.7	8.6	2.6	chr15	65401592	65401626	(36589563)	+	G-rich	Low_complexity	1	38	(0)	1332536
186	18.9	2.6	0.0	chr15	65401681	65401717	(36589472)	C	L2a	LINE/L2	(19)	3407	3370	1332537
375	28.7	1.1	0.0	chr15	65401770	65401863	(36589326)	C	MIRb	SINE/MIR	(165)	103	9	1332538
208	26.6	3.0	5.9	chr15	66721030	66721097	(35270092)	+	L2c	LINE/L2	3267	3332	(55)	1335327
208	27.1	5.4	2.1	chr15	66721118	66721235	(35269954)	C	MIRc	SINE/MIR	(133)	135	2	1335328
13	24.2	1.9	3.8	chr15	68700832	68700883	(33290306)	+	G-rich	Low_complexity	1	53	(0)	1338871
267	18.3	11.8	4.7	chr15	69074759	69074844	(32916345)	C	MamTip1	DNA/hAT-Tip100	(0)	267	175	1339573
260	26.1	11.5	1.1	chr15	70584773	70584865	(31406324)	C	MIR	SINE/MIR	(90)	172	69	1342425
629	32.2	5.5	2.4	chr15	72273122	72273306	(29717883)	+	MIRb	SINE/MIR	8	202	(66)	1345171
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
16	9.1	2.6	5.0	chr15	72320149	72320187	(29671002)	+	(CCCGAGC)n	Simple_repeat	1	40	(0)	1345248
38	6.4	0.0	0.0	chr15	72320477	72320525	(29670664)	+	(GCACACACAG)n	Simple_repeat	1	49	(0)	1345249
2087	14.8	0.6	0.3	chr15	73665904	73666214	(28324975)	C	AluSx	SINE/Alu	(0)	312	1	1347503
3275	20.1	3.4	2.9	chr15	73666215	73666238	(28324951)	C	L1ME2	LINE/L1	(570)	6902	6885	1347502
2667	13.3	8.6	0.5	chr15	73666239	73666684	(28324505)	C	MER66B	LTR/ERV1	(0)	486	1	1347504
1016	5.1	0.0	0.0	chr15	73745694	73745810	(28245379)	+	AluYc	SINE/Alu	155	271	(28)	1347650
30	0.0	0.0	0.0	chr15	73745811	73745839	(28245350)	+	(AAAAC)n	Simple_repeat	1	29	(0)	1347651
14	18.4	2.7	0.0	chr15	73746028	73746070	(28245119)	+	(ACCCC)n	Simple_repeat	1	44	(0)	1347652
2078	22.1	5.2	5.4	chr15	74058485	74059062	(27932127)	+	MER77B	LTR/ERVL	1	577	(123)	1348191
21	0.0	0.0	0.0	chr15	75023306	75023328	(26967861)	+	(A)n	Simple_repeat	1	23	(0)	1350032
274	31.4	4.8	7.3	chr15	75626243	75626393	(26364796)	+	L2b	LINE/L2	3221	3367	(8)	1351238
310	29.1	6.0	9.5	chr15	75626484	75626673	(26364516)	C	MIRb	SINE/MIR	(0)	268	86	1351239
12	18.9	7.1	0.0	chr15	75738638	75738679	(26252510)	+	(GCCCCA)n	Simple_repeat	1	45	(0)	1351436
216	30.3	1.3	0.0	chr15	75842893	75842968	(26148221)	C	L2a	LINE/L2	(676)	2743	2667	1351618
12	34.4	2.6	1.2	chr15	75843554	75843631	(26147558)	+	(CGGCCC)n	Simple_repeat	1	80	(0)	1351619
1789	15.4	6.5	0.0	chr15	78315422	78315694	(23675495)	+	AluJr	SINE/Alu	6	297	(15)	1355628
385	26.2	3.6	1.8	chr15	78315867	78315975	(23675214)	+	MIR3	SINE/MIR	20	130	(78)	1355629
305	26.6	23.5	0.8	chr15	78374586	78374835	(23616354)	C	L2c	LINE/L2	(25)	3350	3027	1355756
227	33.0	14.3	1.5	chr15	78374904	78375365	(23615824)	C	L2c	LINE/L2	(524)	2895	2365	1355756
3239	22.5	4.5	0.7	chr15	79722744	79723513	(22267676)	+	L1MC4	LINE/L1	6460	7260	(782)	1358273
2715	18.9	0.6	0.4	chr15	79723628	79724094	(22267095)	C	MER66B	LTR/ERV1	(0)	486	19	1358274
2469	4.9	2.0	0.0	chr15	79993083	79993370	(21997819)	+	AluY	SINE/Alu	3	296	(15)	1358746
1557	19.7	5.9	0.3	chr15	82868936	82869271	(19121918)	+	MER66A	LTR/ERV1	123	478	(0)	1363599
402	31.7	8.3	4.7	chr15	82869313	82869450	(19121739)	C	L1ME4a	LINE/L1	(152)	5972	5825	1363600
2496	17.0	0.0	3.8	chr15	83193554	83194031	(18797158)	+	MER66B	LTR/ERV1	27	486	(0)	1364218
2355	17.9	5.8	1.1	chr15	83194032	83194569	(18796620)	+	L1MB3	LINE/L1	5616	6180	(3)	1364215
284	21.3	15.1	1.8	chr15	83478319	83478483	(18512706)	+	MIR1_Amn	SINE/MIR	3	181	(87)	1364684
28	22.4	0.0	6.9	chr15	84716616	84716716	(17274473)	+	(CTTT)n	Simple_repeat	1	101	(0)	1366485
2694	13.1	2.3	6.7	chr15	88622389	88622894	(13368295)	C	LTR2B	LTR/ERV1	(0)	483	1	1372704
1128	27.3	17.4	1.2	chr15	89457036	89457461	(12533728)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	3	1374249
16	0.0	0.0	0.0	chr15	90143767	90143783	(11847406)	+	(A)n	Simple_repeat	1	17	(0)	1375717
26	2.7	2.4	4.7	chr15	90143788	90143829	(11847360)	+	(TCTT)n	Simple_repeat	1	43	(0)	1375718
1200	15.0	11.9	8.0	chr15	90954334	90954607	(11036582)	+	AluSz6	SINE/Alu	3	288	(24)	1377405
266	18.1	11.7	2.4	chr15	97144718	97144802	(4846387)	C	MIRc	SINE/MIR	(126)	142	49	1386858
1713	15.9	1.6	2.9	chr15	99960663	99960971	(2030218)	C	AluJr	SINE/Alu	(7)	305	1	1390865
5212	12.1	22.1	0.7	chr15	101979520	101980763	(10426)	+	TAR1	Satellite/telo	483	2068	(43)	1393518
328	3.1	1.9	3.2	chr15	101980765	101981189	(10000)	+	(GGTTAG)n	Simple_repeat	1	433	(0)	1393519
1456	10.8	1.9	0.0	chr16	588336	588539	(89749806)	+	AluJb	SINE/Alu	88	295	(17)	1394981
372	27.2	1.7	2.6	chr16	849174	849290	(89489055)	C	L1MB5	LINE/L1	(506)	5668	5553	1395282
589	21.5	12.7	1.0	chr16	849292	849493	(89488852)	C	MER66B	LTR/ERV1	(0)	486	258	1395283
2211	11.0	1.0	0.0	chr16	849496	849786	(89488559)	C	AluSx1	SINE/Alu	(18)	294	1	1395284
263	34.2	1.8	2.7	chr16	2128562	2128672	(88209673)	+	MIRb	SINE/MIR	122	231	(37)	1396912
1145	13.5	0.0	0.0	chr16	2128713	2128868	(88209477)	C	AluSx3	SINE/Alu	(20)	291	136	1396913
2229	9.4	0.3	0.0	chr16	2128870	2129156	(88209189)	C	AluSg	SINE/Alu	(18)	292	5	1396914
18	0.0	0.0	6.7	chr16	3106652	3106681	(87231664)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1398512
15	13.2	4.4	4.3	chr16	3106682	3106696	(87231649)	+	(GGCTGG)n	Simple_repeat	1	47	(0)	1398513
2365	10.2	0.3	0.0	chr16	3942925	3943228	(86395117)	+	AluSz	SINE/Alu	1	305	(7)	1400129
2986	14.7	3.7	0.4	chr16	3943464	3943933	(86394412)	C	MER66B	LTR/ERV1	(0)	486	1	1400130
2062	19.8	3.5	5.4	chr16	4110156	4110376	(86227969)	C	MER66B	LTR/ERV1	(0)	486	269	1400456
2139	9.4	0.0	1.7	chr16	4110377	4110689	(86227656)	C	AluSx	SINE/Alu	(0)	312	1	1400457
1011	12.8	2.0	0.0	chr16	4253278	4253426	(86084919)	+	AluJb	SINE/Alu	136	287	(25)	1400764
14	22.7	0.0	2.3	chr16	4253899	4253941	(86084404)	+	G-rich	Low_complexity	1	43	(0)	1400765
359	23.4	17.6	1.3	chr16	4254280	4254435	(86083910)	+	L1ME1	LINE/L1	5875	6061	(118)	1400766
2388	8.4	1.0	0.0	chr16	4254457	4254764	(86083581)	C	AluSp	SINE/Alu	(2)	311	1	1400767
195	33.3	1.4	2.7	chr16	5877310	5877383	(84460962)	C	L2c	LINE/L2	(60)	3327	3255	1404179
2845	16.8	0.6	0.4	chr16	5877515	5877999	(84460346)	C	MER66B	LTR/ERV1	(0)	486	1	1404180
19	9.1	2.9	0.0	chr16	9052955	9052990	(81285355)	+	(CAAAAA)n	Simple_repeat	1	37	(0)	1410459
552	25.5	11.9	4.4	chr16	9052996	9053356	(81284989)	C	MLT1J2	LTR/ERVL-MaLR	(36)	412	20	1410460
841	33.4	5.9	6.7	chr16	9053374	9053615	(81284730)	+	L2a	LINE/L2	2937	3188	(238)	1410461
2524	15.3	7.0	4.6	chr16	9632773	9633246	(80705099)	+	MER66B	LTR/ERV1	1	486	(0)	1411778
1120	18.7	2.3	2.3	chr16	9633261	9633479	(80704866)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1411779
2187	10.4	0.3	2.3	chr16	10385296	10385602	(79952743)	+	AluSq2	SINE/Alu	5	305	(8)	1413404
228	22.4	8.6	0.0	chr16	10385620	10385704	(79952641)	C	MER96B	DNA/hAT-Tip100	(31)	386	294	1413405
363	23.7	32.2	1.8	chr16	10563706	10563884	(79774461)	+	MIR	SINE/MIR	19	252	(10)	1413721
1718	16.7	18.7	2.5	chr16	10563887	10564208	(79774137)	C	MER66B	LTR/ERV1	(0)	486	93	1413722
2336	9.2	0.0	0.0	chr16	10564209	10564511	(79773834)	+	AluSx1	SINE/Alu	1	303	(9)	1413723
2588	19.1	2.0	2.3	chr16	12288139	12288625	(78049720)	+	MER66B	LTR/ERV1	1	486	(0)	1417625
1108	18.8	3.5	5.2	chr16	12288626	12288703	(78049642)	+	AluJr	SINE/Alu	234	310	(2)	1417624
598	30.5	12.4	1.3	chr16	12288710	12288945	(78049400)	C	MIRb	SINE/MIR	(2)	266	1	1417626
1096	22.2	11.5	0.9	chr16	13913419	13913745	(76424600)	+	LTR16A2	LTR/ERVL	83	448	(47)	1421139
2937	15.6	2.5	0.4	chr16	13913765	13914234	(76424111)	C	MER66B	LTR/ERV1	(0)	486	7	1421140
315	35.0	8.2	3.2	chr16	14630435	14630655	(75707690)	C	L2a	LINE/L2	(3)	3423	3191	1422532
1235	18.4	12.5	0.4	chr16	14630658	14630918	(75707427)	+	AluJo	SINE/Alu	3	299	(13)	1422533
596	29.4	3.6	8.3	chr16	16616965	16617645	(73720700)	C	L2a	LINE/L2	(17)	3409	2776	1427278
2776	12.8	0.2	1.4	chr16	16617648	16617746	(73720599)	C	MER66B	LTR/ERV1	(0)	486	389	1427279
1999	12.0	2.7	1.4	chr16	16617747	16618037	(73720308)	C	AluSq2	SINE/Alu	(18)	295	1	1427280
2566	15.8	2.6	1.5	chr16	19237368	19237822	(71100523)	+	MER66B	LTR/ERV1	27	486	(0)	1433058
438	30.2	20.7	1.6	chr16	19237867	19238189	(71100156)	C	L2b	LINE/L2	(427)	2992	2592	1433044
456	30.7	7.2	4.2	chr16	21084060	21084273	(69254072)	+	MIRb	SINE/MIR	33	253	(15)	1437117
2033	21.4	8.6	2.2	chr16	22584350	22584702	(67753643)	+	MLT1E1A	LTR/ERVL-MaLR	1	439	(241)	1440385
2513	17.9	2.3	2.7	chr16	22584703	22585190	(67753155)	C	MER66B	LTR/ERV1	(0)	486	1	1440386
3058	15.8	2.1	0.6	chr16	23282568	23283046	(67055299)	+	MER66B	LTR/ERV1	1	486	(0)	1441883
2059	14.6	1.4	5.1	chr16	23283047	23283129	(67055216)	C	MER47A	DNA/TcMar-Tigger	(66)	300	217	1441882
2112	13.7	0.0	0.0	chr16	23283130	23283422	(67054923)	+	AluSz	SINE/Alu	2	294	(18)	1441884
1338	16.0	9.6	5.2	chr16	23452280	23452567	(66885778)	+	AluJo	SINE/Alu	1	302	(10)	1442305
298	26.4	12.5	0.0	chr16	23735460	23735527	(66602818)	C	Charlie7a	DNA/hAT-Charlie	(0)	272	205	1442990
72	0.0	0.0	0.0	chr16	23735528	23735588	(66602757)	+	(AT)n	Simple_repeat	1	61	(0)	1442991
298	26.4	12.5	0.0	chr16	23735589	23735610	(66602735)	C	Charlie7a	DNA/hAT-Charlie	(68)	204	170	1442990
358	17.4	12.2	1.1	chr16	25066638	25066724	(65271621)	+	LTR53-int	LTR/ERVL	1379	1476	(1853)	1446146
513	23.9	2.7	8.4	chr16	25325954	25326108	(65012237)	C	MIR	SINE/MIR	(13)	249	104	1446764
222	25.0	13.6	0.0	chr16	25326144	25326219	(65012126)	C	L2c	LINE/L2	(228)	3159	3072	1446765
2992	14.1	1.3	0.4	chr16	25326282	25326737	(65011608)	C	MER66B	LTR/ERV1	(0)	486	27	1446766
2555	6.3	0.0	0.7	chr16	29762237	29762539	(60575806)	+	AluYf1	SINE/Alu	1	301	(10)	1456510
2468	16.6	3.8	1.9	chr16	29762540	29762632	(60575713)	+	MER66C	LTR/ERV1	449	537	(18)	1456509
1998	12.2	2.5	0.7	chr16	29762727	29763005	(60575340)	+	AluSq2	SINE/Alu	1	284	(29)	1456511
61	30.9	1.3	1.3	chr16	29807052	29807278	(60531067)	+	(CGC)n	Simple_repeat	1	230	(0)	1456610
276	34.2	9.3	4.4	chr16	29961282	29961486	(60376859)	C	MIRb	SINE/MIR	(31)	237	22	1456976
11309	12.1	2.7	1.0	chr16	30097209	30099040	(60239305)	+	HERVIP10B3-int	LTR/ERV1	1	1864	(5739)	1457253
930	23.2	5.3	1.7	chr16	30409813	30410049	(59928296)	+	MIR	SINE/MIR	17	262	(0)	1457961
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
2281	17.2	2.9	9.7	chr16	31386599	31387114	(58951231)	+	MER66D	LTR/ERV1	1	480	(4)	1460203
914	29.6	15.9	2.1	chr16	31387115	31387370	(58950975)	+	Charlie25	DNA/hAT-Charlie	1289	1600	(924)	1460202
44	19.5	0.9	4.3	chr16	31404778	31404891	(58933454)	+	(TCCT)n	Simple_repeat	1	115	(0)	1460241
1116	19.7	0.6	0.0	chr16	31404893	31405075	(58933270)	C	AluSx	SINE/Alu	(3)	309	126	1460242
942	20.1	7.5	2.1	chr16	31628735	31629004	(58709341)	+	MER66B	LTR/ERV1	214	486	(0)	1460624
2395	17.7	1.2	2.5	chr16	31629005	31629341	(58709004)	+	L1M3a	LINE/L1	5551	5889	(1670)	1460620
4975	20.8	2.5	3.5	chr16	31726764	31727291	(58611054)	C	L1MA9	LINE/L1	(1494)	6065	5551	1460737
1015	19.2	7.4	1.6	chr16	31727292	31727534	(58610811)	C	MER66B	LTR/ERV1	(0)	486	229	1460741
5287	21.0	3.9	2.6	chr16	31727535	31727860	(58610485)	C	L1MA9	LINE/L1	(2526)	5033	4701	1460737
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
6096	21.7	6.8	1.8	chr16	46785195	46786798	(43551547)	+	L1MA8	LINE/L1	746	2137	(4516)	1466047
2244	8.4	4.7	0.0	chr16	46786799	46787082	(43551263)	+	AluSq2	SINE/Alu	1	298	(15)	1466048
59	17.5	0.0	0.0	chr16	46830234	46830343	(43508002)	+	GA-rich	Low_complexity	1	110	(0)	1466113
14	8.2	3.9	0.0	chr16	46831050	46831075	(43507270)	+	(CCGC)n	Simple_repeat	1	27	(0)	1466114
2073	9.4	0.0	9.1	chr16	46869704	46870033	(43468312)	+	AluSc	SINE/Alu	1	300	(9)	1466206
2680	9.1	0.0	8.3	chr16	46870034	46870347	(43467998)	C	THE1C	LTR/ERVL-MaLR	(65)	310	1	1466203
518	13.7	0.0	0.0	chr16	46870358	46870430	(43467915)	+	AluJb	SINE/Alu	230	302	(10)	1466207
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
236	28.8	1.5	1.5	chr16	47038395	47038461	(43299884)	+	MIR	SINE/MIR	82	148	(114)	1466606
529	16.0	3.1	1.1	chr16	47038474	47038567	(43299778)	+	AluJr	SINE/Alu	187	282	(30)	1466607
313	19.8	0.0	8.6	chr16	47038575	47038622	(43299723)	C	MER53	DNA/hAT	(14)	179	136	1466608
2297	10.2	1.9	0.0	chr16	47038623	47038925	(43299420)	C	AluSz	SINE/Alu	(3)	309	1	1466609
2568	17.9	1.2	4.8	chr16	48187848	48188351	(42149994)	+	MER66B	LTR/ERV1	1	486	(0)	1468294
495	27.3	9.4	3.7	chr16	48188352	48188391	(42149954)	+	MIRb	SINE/MIR	234	268	(0)	1468292
350	30.9	7.8	9.6	chr16	48188565	48188761	(42149584)	C	MIR3	SINE/MIR	(10)	198	6	1468295
1894	12.8	5.7	0.0	chr16	49876995	49877157	(40461188)	C	AluJo	SINE/Alu	(13)	299	137	1471286
42	3.2	4.5	2.9	chr16	49877158	49877224	(40461121)	+	(GTTT)n	Simple_repeat	1	70	(0)	1471287
16	6.8	6.5	0.0	chr16	50065936	50065967	(40272378)	+	(CCCCGA)n	Simple_repeat	1	34	(0)	1471725
13	26.4	3.2	3.1	chr16	50066194	50066255	(40272090)	+	(GGC)n	Simple_repeat	1	64	(0)	1471726
2415	18.7	0.8	3.8	chr16	51171027	51171527	(39166818)	C	MER66B	LTR/ERV1	(0)	486	1	1473862
585	21.1	8.0	4.2	chr16	51697544	51697736	(38640609)	+	LTR16C	LTR/ERVL	289	489	(0)	1474820
1959	19.3	2.4	2.9	chr16	51697806	51698259	(38640086)	C	MER66A	LTR/ERV1	(0)	478	27	1474821
12	11.6	3.3	3.2	chr16	53131472	53131501	(37206844)	+	(GCCCC)n	Simple_repeat	1	31	(0)	1477323
1599	21.1	13.1	2.9	chr16	54056416	54056893	(36281452)	+	MLT1F	LTR/ERVL-MaLR	15	548	(0)	1478835
578	23.2	11.6	1.5	chr16	56743609	56743809	(33594536)	C	L1ME3A	LINE/L1	(9)	6164	5941	1483671
12	18.8	2.6	2.6	chr16	58129651	58129688	(32208657)	+	(ACGTG)n	Simple_repeat	1	39	(0)	1486505
371	24.1	0.0	0.0	chr16	58129891	58129973	(32208372)	+	L1M5	LINE/L1	2968	3050	(3096)	1486506
2086	11.9	0.0	0.3	chr16	58129979	58130272	(32208073)	+	AluJb	SINE/Alu	1	293	(19)	1486507
2305	19.7	10.2	0.2	chr16	58442386	58442863	(31895482)	C	MER74A	LTR/ERVL	(0)	558	28	1487114
230	22.8	0.0	1.7	chr16	58442877	58442934	(31895411)	C	Charlie4a	DNA/hAT-Charlie	(448)	60	4	1487112
525	22.0	16.7	1.5	chr16	58442984	58443186	(31895159)	C	MER102c	DNA/hAT-Charlie	(0)	331	92	1487115
12	11.2	6.7	0.0	chr16	58756341	58756370	(31581975)	+	(TATGTG)n	Simple_repeat	1	32	(0)	1487791
252	26.3	8.3	0.0	chr16	62965471	62965569	(27372776)	C	MLT1F	LTR/ERVL-MaLR	(451)	144	37	1494210
1749	20.0	8.3	9.7	chr16	62965675	62966221	(27372124)	C	MER66C	LTR/ERV1	(14)	541	3	1494211
407	24.4	5.9	5.3	chr16	69725986	69726154	(20612191)	C	MER102b	DNA/hAT-Charlie	(167)	174	5	1506424
1044	22.5	8.1	2.2	chr16	70648738	70649060	(19689285)	C	MLT1C	LTR/ERVL-MaLR	(15)	452	109	1508451
2249	18.6	3.7	1.3	chr16	70649087	70649560	(19688785)	C	MER66B	LTR/ERV1	(0)	486	1	1508452
493	26.1	12.8	5.0	chr16	71236809	71237110	(19101235)	+	MLT1C	LTR/ERVL-MaLR	1	329	(176)	1509310
2666	15.2	2.3	0.6	chr16	71237112	71237582	(19100763)	C	MER66B	LTR/ERV1	(0)	486	8	1509311
1695	14.7	16.8	14.9	chr16	71276755	71277225	(19061120)	+	MER41B	LTR/ERV1	1	598	(36)	1509385
5257	17.3	7.1	1.6	chr16	71277230	71278516	(19059829)	+	Charlie1a	DNA/hAT-Charlie	92	1455	(0)	1509386
56	3.5	0.0	0.0	chr16	71301323	71301381	(19036964)	+	(ATAG)n	Simple_repeat	1	59	(0)	1509426
2939	14.9	0.4	1.4	chr16	74146264	74146752	(16191593)	+	MER66B	LTR/ERV1	3	486	(0)	1514094
496	33.3	0.9	5.5	chr16	74146753	74146767	(16191578)	C	MER115	DNA/hAT-Tip100	(675)	18	5	1514093
287	29.2	10.9	5.0	chr16	74146772	74146951	(16191394)	C	LTR33A_	LTR/ERVL	(268)	263	72	1514095
4143	25.6	8.4	10.5	chr16	74146961	74147105	(16191240)	C	L1ME3E	LINE/L1	(863)	5456	5323	1514091
12	26.4	2.2	0.0	chr16	74240123	74240167	(16098178)	+	(TCTTTA)n	Simple_repeat	1	46	(0)	1514250
2700	17.4	3.9	4.3	chr16	74240280	74240665	(16097680)	C	MER66B	LTR/ERV1	(0)	486	93	1514251
2564	17.6	1.9	0.8	chr16	75376669	75377149	(14961196)	+	MER66B	LTR/ERV1	1	486	(0)	1516651
2338	21.4	12.5	4.5	chr16	75377150	75377199	(14961146)	+	L1ME2	LINE/L1	6073	6121	(43)	1516648
15719	14.4	3.1	4.0	chr16	75433679	75434907	(14903438)	+	Tigger17	DNA/TcMar-Tigger	1	1199	(1474)	1516787
192	27.6	12.1	0.0	chr16	81007744	81007801	(9330544)	C	L2a	LINE/L2	(2)	3424	3359	1526294
273	13.6	0.0	0.0	chr16	81096689	81096732	(9241613)	C	LTR8	LTR/ERV1	(647)	44	1	1526469
2920	13.8	8.2	0.0	chr16	81096733	81097209	(9241136)	C	MER41E	LTR/ERV1	(75)	520	1	1526470
2061	13.4	5.8	2.0	chr16	83832765	83833114	(6505231)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1531679
2168	18.4	4.8	4.0	chr16	83833115	83833343	(6505002)	+	MER66B	LTR/ERV1	263	486	(0)	1531678
320	25.9	5.0	1.5	chr16	83833348	83833504	(6504841)	C	MLT1L	LTR/ERVL-MaLR	(91)	488	319	1531680
946	30.9	0.0	0.4	chr16	83833535	83833794	(6504551)	+	LTR16B2	LTR/ERVL	4	262	(200)	1531681
517	32.7	1.5	1.2	chr16	84144114	84144328	(6194017)	C	MIRb	SINE/MIR	(19)	249	28	1532218
1931	14.2	2.0	0.3	chr16	84970282	84970569	(5367776)	C	AluSz	SINE/Alu	(18)	294	2	1533945
225	13.9	0.0	0.0	chr16	84970601	84970636	(5367709)	+	L2b	LINE/L2	3330	3365	(10)	1533946
268	32.7	18.4	2.3	chr16	85460459	85461025	(4877320)	+	L3	LINE/CR1	3282	3960	(139)	1534884
991	20.3	2.3	4.1	chr16	85461162	85461382	(4876963)	C	MER20	DNA/hAT-Charlie	(2)	217	1	1534885
1768	17.2	3.9	1.0	chr16	85471402	85471704	(4866641)	C	AluJo	SINE/Alu	(0)	312	1	1534904
971	18.4	2.4	0.6	chr16	85471712	85471874	(4866471)	C	FRAM	SINE/Alu	(10)	166	1	1534905
540	22.9	7.7	0.0	chr16	85471973	85472129	(4866216)	C	MER20	DNA/hAT-Charlie	(20)	199	30	1534906
12	11.1	6.9	0.0	chr16	86060217	86060245	(4278100)	+	(TCTCC)n	Simple_repeat	1	31	(0)	1535966
1118	25.4	8.0	4.2	chr16	86961701	86962131	(3376214)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	17	1537547
462	29.1	4.2	3.2	chr16	86962311	86962498	(3375847)	C	L2a	LINE/L2	(46)	3380	3191	1537548
295	33.3	4.9	0.7	chr16	86962613	86962753	(3375592)	+	MIR3	SINE/MIR	12	153	(55)	1537549
1305	25.3	7.6	3.2	chr16	86970064	86970504	(3367841)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	1537566
11	10.6	0.0	10.5	chr16	87317335	87317372	(3020973)	+	(AACCC)n	Simple_repeat	1	38	(0)	1538230
13	4.7	0.0	4.2	chr16	87317392	87317415	(3020930)	+	(CGCC)n	Simple_repeat	1	24	(0)	1538231
1385	15.0	3.1	6.7	chr16	88094786	88095052	(2243293)	+	AluJr	SINE/Alu	26	282	(30)	1539530
532	25.2	17.9	3.2	chr16	88323919	88324364	(2013981)	C	MLT1G1	LTR/ERVL-MaLR	(2)	577	20	1539807
1221	20.6	10.0	0.6	chr16	88324470	88324822	(2013523)	C	MER66D	LTR/ERV1	(0)	484	115	1539808
1296	29.9	8.9	6.5	chr16	89396978	89397179	(941166)	+	Charlie1a	DNA/hAT-Charlie	1207	1400	(55)	1541195
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
2472	8.9	0.0	0.0	chr16	89842209	89842512	(495833)	C	AluSx	SINE/Alu	(8)	304	1	1541959
9753	15.4	4.2	0.3	chr16	90054057	90055622	(282723)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1542295
2136	11.9	1.0	0.0	chr17	959515	959807	(82297634)	+	AluSq	SINE/Alu	1	296	(17)	1546119
1954	10.4	3.2	5.3	chr17	1563412	1563729	(81693712)	+	AluSx1	SINE/Alu	1	311	(1)	1547360
503	32.5	16.2	2.1	chr17	1563767	1564473	(81692968)	C	L2c	LINE/L2	(194)	3193	2364	1547361
17	19.6	0.0	5.8	chr17	2400961	2401012	(80856429)	+	(CTCC)n	Simple_repeat	1	52	(0)	1549024
30	19.8	9.2	0.0	chr17	2593836	2593944	(80663497)	+	(CCCT)n	Simple_repeat	1	119	(0)	1549533
22	15.5	5.7	4.0	chr17	2594105	2594174	(80663267)	+	(TCC)n	Simple_repeat	1	74	(0)	1549534
386	25.0	13.5	2.2	chr17	4332429	4332612	(78924829)	+	L2a	LINE/L2	2756	2963	(456)	1552778
374	29.2	22.6	2.2	chr17	4332699	4333059	(78924382)	+	L2a	LINE/L2	2971	3426	(0)	1552778
12	9.2	0.0	4.0	chr17	5184695	5184719	(78072722)	+	(ATAA)n	Simple_repeat	1	25	(0)	1554564
851	20.6	1.5	5.4	chr17	5184720	5184924	(78072517)	C	LTR41C	LTR/ERVL	(504)	197	1	1554565
2468	5.7	0.7	0.3	chr17	7232808	7233107	(76024334)	+	AluY	SINE/Alu	1	301	(10)	1558478
323	33.0	11.0	1.9	chr17	7295903	7296213	(75961228)	+	L2a	LINE/L2	3016	3425	(1)	1558577
258	5.6	0.0	0.0	chr17	7296286	7296334	(75961107)	+	FLAM_C	SINE/Alu	1	34	(99)	1558578
14	12.8	0.0	7.5	chr17	7394560	7394599	(75862842)	+	(CCCCGC)n	Simple_repeat	1	40	(0)	1558758
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
343	23.7	20.1	0.8	chr17	7992575	7992706	(75264735)	C	MLT1K-int	LTR/ERVL-MaLR	(0)	1409	1246	1559900
213	31.5	3.2	3.2	chr17	7992813	7992907	(75264534)	C	L2b	LINE/L2	(7)	3368	3274	1559903
671	10.9	0.0	0.0	chr17	7992957	7993048	(75264393)	C	MER66B	LTR/ERV1	(0)	486	395	1559904
1406	18.6	0.4	0.0	chr17	7993048	7993284	(75264157)	C	MER66B	LTR/ERV1	(248)	238	1	1559904
213	12.7	8.3	11.3	chr17	8016847	8016908	(75240533)	C	MER91C	DNA/hAT-Tip100	(23)	117	58	1559943
15	31.6	0.0	3.0	chr17	8189693	8189758	(75067683)	+	(CCT)n	Simple_repeat	1	66	(0)	1560268
1795	15.7	9.2	1.9	chr17	8610503	8610866	(74646575)	+	MSTD	LTR/ERVL-MaLR	1	393	(3)	1561085
22	9.8	0.0	7.8	chr17	9239979	9240029	(74017412)	+	(GCGG)n	Simple_repeat	1	51	(0)	1562290
13	24.4	0.0	2.2	chr17	9240074	9240118	(74017323)	+	G-rich	Low_complexity	1	45	(0)	1562291
11	21.4	1.5	9.1	chr17	9240273	9240337	(74017104)	+	G-rich	Low_complexity	1	66	(0)	1562292
279	38.7	4.6	3.2	chr17	9434329	9434608	(73822833)	C	L2b	LINE/L2	(540)	2879	2596	1562702
2117	17.4	12.0	5.0	chr17	9434614	9435114	(73822327)	C	MER66C	LTR/ERV1	(14)	541	1	1562704
2028	20.3	13.8	8.6	chr17	9744680	9745160	(73512281)	C	LTR41	LTR/ERVL	(143)	625	81	1563317
2086	11.3	0.0	1.4	chr17	9745161	9745494	(73511947)	C	AluSx3	SINE/Alu	(0)	311	1	1563319
2361	7.8	0.0	0.0	chr17	10182176	10182459	(73074982)	C	AluSq2	SINE/Alu	(29)	284	1	1564205
2505	19.4	4.5	8.0	chr17	10182460	10182580	(73074861)	+	MER41B	LTR/ERV1	356	596	(38)	1564204
2176	22.7	2.3	0.8	chr17	12465424	12465902	(70791539)	+	MER66B	LTR/ERV1	1	486	(0)	1568109
6118	12.6	1.6	1.6	chr17	12465903	12466571	(70790870)	C	L1MC1	LINE/L1	(547)	5786	5115	1568107
3275	14.6	2.5	0.4	chr17	15132022	15132536	(68124905)	+	MER66C	LTR/ERV1	16	541	(14)	1572581
1217	23.9	10.8	3.9	chr17	15132512	15132931	(68124510)	C	MER41G	LTR/ERV1	(233)	652	178	1572580
17	7.0	0.0	5.9	chr17	15651820	15651853	(67605588)	+	(CTCAGG)n	Simple_repeat	1	34	(0)	1573445
1057	9.0	0.0	0.0	chr17	16589595	16589727	(66667714)	C	AluSq10	SINE/Alu	(180)	133	1	1575259
4124	25.7	5.0	9.7	chr17	16589777	16590230	(66667211)	+	L1MB5	LINE/L1	2658	3123	(3023)	1575260
2488	4.9	0.7	0.7	chr17	18087192	18087495	(65169946)	C	AluSp	SINE/Alu	(9)	304	1	1577926
1447	10.0	3.1	8.3	chr17	18087496	18087625	(65169816)	+	MER30	DNA/hAT-Charlie	104	228	(2)	1577924
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
32	12.1	3.9	3.8	chr17	28726266	28726342	(54531099)	+	(GCCCCC)n	Simple_repeat	1	80	(0)	1589203
3431	12.2	6.5	0.0	chr17	29847631	29848136	(53409305)	+	MER66C	LTR/ERV1	1	541	(14)	1591476
1268	16.9	13.0	2.2	chr17	30826000	30826266	(52431175)	+	AluJo	SINE/Alu	1	300	(12)	1593365
13	18.9	2.8	0.0	chr17	31549832	31549867	(51707574)	+	(GCGGAGG)n	Simple_repeat	1	37	(0)	1594797
17	13.7	0.0	0.0	chr17	31549981	31550012	(51707429)	+	(CGGGGC)n	Simple_repeat	1	32	(0)	1594798
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
637	29.1	12.0	4.3	chr17	33035715	33036159	(50221282)	C	L1ME2	LINE/L1	(5577)	732	249	1597829
1703	17.7	4.8	1.0	chr17	33201748	33202047	(50055394)	+	AluJb	SINE/Alu	1	312	(0)	1598167
2739	15.3	0.4	8.3	chr17	33202048	33202173	(50055268)	+	MER66A	LTR/ERV1	386	474	(4)	1598166
2355	16.0	6.0	1.9	chr17	33484652	33485117	(49772324)	+	MER66B	LTR/ERV1	1	486	(0)	1598755
2749	15.0	3.7	7.0	chr17	34648139	34648641	(48608800)	C	MER66B	LTR/ERV1	(0)	486	1	1600802
18	23.6	0.0	0.0	chr17	35587383	35587428	(47670013)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	1602448
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
306	31.9	9.1	1.2	chr17	35992115	35992293	(47265148)	C	L2c	LINE/L2	(190)	3185	2992	1603226
2182	11.9	0.0	0.0	chr17	35992417	35992709	(47264732)	+	AluSx1	SINE/Alu	11	303	(9)	1603227
1718	29.1	3.2	2.7	chr17	36144057	36144653	(47112788)	+	ERVL-E-int	LTR/ERVL	1609	2208	(3459)	1603454
2132	19.2	0.0	0.3	chr17	36144703	36145068	(47112373)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1603456
14	24.0	2.4	0.0	chr17	39924817	39924857	(43332584)	+	GA-rich	Low_complexity	1	42	(0)	1611010
44	21.2	3.6	3.5	chr17	40358400	40358550	(42898891)	+	A-rich	Low_complexity	1	151	(0)	1611875
324	25.6	8.3	0.0	chr17	40358743	40358863	(42898578)	C	MER20B	DNA/hAT-Charlie	(44)	739	608	1611876
474	27.1	0.8	0.8	chr17	40803889	40804022	(42453419)	C	MIRc	SINE/MIR	(13)	255	122	1612671
441	28.0	4.6	0.4	chr17	41005672	41005810	(42251631)	+	MIRb	SINE/MIR	3	143	(125)	1613005
2320	16.6	5.6	1.1	chr17	41005835	41006298	(42251143)	C	MER66B	LTR/ERV1	(0)	486	1	1613006
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
769	16.0	0.0	0.8	chr17	42653215	42653345	(40604096)	C	FLAM_A	SINE/Alu	(12)	130	1	1616089
535	30.6	2.6	1.7	chr17	42653966	42654198	(40603243)	+	L1M5	LINE/L1	4898	5132	(1014)	1616090
7985	10.8	0.6	4.6	chr17	43319366	43320150	(39937291)	C	THE1B-int	LTR/ERVL-MaLR	(298)	1282	501	1617594
2112	11.8	0.0	0.0	chr17	43320151	43320454	(39936987)	C	AluSc	SINE/Alu	(0)	309	1	1617597
2237	8.6	0.3	0.3	chr17	43606541	43606841	(39650600)	+	AluSc	SINE/Alu	1	301	(8)	1618216
316	18.1	15.3	0.0	chr17	43606843	43606925	(39650516)	+	LTR52	LTR/ERVL	109	206	(215)	1618213
727	12.0	0.0	0.0	chr17	43606944	43607051	(39650390)	C	MER66B	LTR/ERV1	(16)	539	432	1618217
1197	10.6	0.0	0.0	chr17	43607055	43607214	(39650227)	C	AluSx3	SINE/Alu	(16)	295	136	1618218
444	27.2	8.9	1.3	chr17	44124298	44124542	(39132899)	+	L1M5	LINE/L1	5558	5823	(301)	1619261
2371	5.0	0.7	1.3	chr17	44186038	44186335	(39071106)	+	AluSp	SINE/Alu	1	296	(17)	1619418
16	20.5	4.5	4.3	chr17	44221524	44221590	(39035851)	+	(CCTCCTG)n	Simple_repeat	1	70	(0)	1619468
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
12	5.5	0.0	0.0	chr17	45248052	45248070	(38009371)	+	(GGA)n	Simple_repeat	1	19	(0)	1621666
241	14.3	2.0	2.0	chr17	45605263	45605312	(37652129)	C	MER102c	DNA/hAT-Charlie	(0)	331	282	1622390
990	24.4	5.4	4.8	chr17	45605332	45605461	(37651980)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	244	1622391
2749	16.7	0.2	6.2	chr17	45605462	45605565	(37651876)	C	MER66B	LTR/ERV1	(0)	486	387	1622392
1905	14.3	3.7	0.7	chr17	45605566	45605851	(37651590)	C	AluSz	SINE/Alu	(17)	295	1	1622393
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
1959	13.3	3.7	0.7	chr17	46240100	46240385	(37017056)	+	AluSz	SINE/Alu	1	295	(17)	1623669
2762	16.7	0.2	5.8	chr17	46240386	46240489	(37016952)	+	MER66B	LTR/ERV1	387	486	(0)	1623667
1020	23.8	4.9	4.2	chr17	46240490	46240619	(37016822)	+	MLT1A	LTR/ERVL-MaLR	242	374	(0)	1623666
243	14.3	2.0	2.0	chr17	46240639	46240688	(37016753)	+	MER102c	DNA/hAT-Charlie	282	331	(0)	1623670
1991	12.2	2.1	0.0	chr17	46240769	46241046	(37016395)	+	AluSx1	SINE/Alu	1	284	(28)	1623671
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
1781	15.9	3.7	0.7	chr17	47102715	47103004	(36154437)	+	AluSz	SINE/Alu	1	299	(13)	1625341
2761	16.9	0.2	5.8	chr17	47103005	47103108	(36154333)	+	MER66B	LTR/ERV1	387	486	(0)	1625339
1053	24.2	4.8	4.1	chr17	47103109	47103238	(36154203)	+	MLT1A	LTR/ERVL-MaLR	246	374	(0)	1625332
252	23.2	1.4	4.2	chr17	47103239	47103307	(36154134)	+	MER102c	DNA/hAT-Charlie	265	331	(0)	1625342
2035	10.0	0.0	0.7	chr17	50782730	50783047	(32474394)	C	AluSz	SINE/Alu	(0)	312	2	1632447
16	20.5	1.4	0.0	chr17	50865473	50865518	(32391923)	+	GA-rich	Low_complexity	1	46	(0)	1632609
3158	14.0	0.2	0.8	chr17	51127929	51128417	(32129024)	C	MER66B	LTR/ERV1	(0)	486	1	1633179
394	22.5	0.0	0.0	chr17	54974557	54974627	(28282814)	+	MER45R	DNA/hAT-Tip100	1	71	(1510)	1638854
2322	18.2	1.9	1.1	chr17	54974629	54975084	(28282357)	C	MER66B	LTR/ERV1	(0)	486	27	1638855
426	28.1	13.8	2.9	chr17	56715778	56715982	(26541459)	+	MIRb	SINE/MIR	38	268	(0)	1641819
348	29.0	16.2	1.4	chr17	56716289	56716435	(26541006)	+	MIRb	SINE/MIR	95	267	(1)	1641820
814	30.2	12.4	1.4	chr17	56818878	56819482	(26437959)	+	L2a	LINE/L2	2665	3345	(81)	1642042
564	14.6	0.0	6.8	chr17	56831791	56831870	(26425571)	+	MER67B	LTR/ERV1	1	73	(470)	1642075
2084	25.1	4.0	3.7	chr17	56831871	56831942	(26425499)	+	MER67B	LTR/ERV1	1	74	(587)	1642075
2306	9.2	0.3	0.7	chr17	56831943	56832245	(26425196)	C	AluSg7	SINE/Alu	(7)	302	1	1642076
21	16.2	2.0	2.0	chr17	58083200	58083251	(25174190)	+	(CCCTCC)n	Simple_repeat	1	52	(0)	1644417
240	41.8	5.9	1.3	chr17	58387991	58388218	(24869223)	C	MamRTE1	LINE/RTE-BovB	(2798)	1014	776	1644916
14	16.9	2.3	4.4	chr17	60102666	60102709	(23154732)	+	(GGCCGCG)n	Simple_repeat	1	45	(0)	1648573
18	21.5	0.0	7.3	chr17	60102710	60102730	(23154711)	+	(GGC)n	Simple_repeat	4	68	(0)	1648574
353	24.5	7.8	7.8	chr17	60102889	60103003	(23154438)	+	L1M5	LINE/L1	5573	5687	(437)	1648575
444	30.1	5.5	4.9	chr17	60613376	60613440	(22644001)	+	MIR	SINE/MIR	13	77	(185)	1649656
11335	8.8	4.3	2.0	chr17	60613441	60614980	(22642461)	+	LTR12C	LTR/ERV1	3	1579	(0)	1649657
1890	17.6	9.9	12.2	chr17	62077936	62078346	(21179095)	+	MER66B	LTR/ERV1	72	486	(0)	1652214
1100	21.7	0.0	3.6	chr17	62078347	62078436	(21179005)	C	MLT1F	LTR/ERVL-MaLR	(122)	447	358	1652210
303	29.4	4.4	3.2	chr17	62078491	62078648	(21178793)	+	LTR33A_	LTR/ERVL	372	531	(0)	1652209
256	35.2	3.0	1.5	chr17	62423406	62423535	(20833906)	C	Tigger19b	DNA/TcMar-Tigger	(178)	372	241	1652930
2069	12.0	3.2	0.3	chr17	62777443	62777743	(20479698)	+	AluSx1	SINE/Alu	3	312	(0)	1653677
2429	20.0	0.9	1.1	chr17	62777744	62777972	(20479469)	+	MER66B	LTR/ERV1	257	486	(0)	1653676
325	29.4	6.0	1.8	chr17	62777979	62778089	(20479352)	C	L2c	LINE/L2	(6)	3381	3266	1653678
288	37.3	5.0	2.6	chr17	62778240	62778473	(20478968)	C	L2c	LINE/L2	(470)	2949	2710	1653678
3006	14.2	1.2	2.2	chr17	64406857	64407347	(18850094)	+	MER66B	LTR/ERV1	1	486	(0)	1656518
2508	8.0	0.0	0.3	chr17	64407438	64407750	(18849691)	+	AluSx1	SINE/Alu	1	312	(0)	1656519
644	23.0	9.9	0.0	chr17	64702760	64702950	(18554491)	C	L2a	LINE/L2	(1)	3425	3214	1657133
742	25.5	0.7	0.0	chr17	64702951	64703103	(18554338)	+	MLT1A0	LTR/ERVL-MaLR	171	324	(41)	1657134
595	29.4	9.5	1.6	chr17	64703107	64703348	(18554093)	C	L2a	LINE/L2	(196)	3230	2968	1657133
11	27.2	2.0	2.0	chr17	64836984	64837033	(18420408)	+	(CCCGCCT)n	Simple_repeat	1	51	(0)	1657417
222	20.8	0.0	0.0	chr17	66365402	66365449	(16891992)	C	MIRb	SINE/MIR	(38)	230	183	1660160
206	36.4	6.1	0.7	chr17	66365732	66365886	(16891555)	+	Tigger19b	DNA/TcMar-Tigger	385	548	(2)	1660161
2465	8.1	0.0	0.3	chr17	68247054	68247360	(15010081)	+	AluSx1	SINE/Alu	2	307	(5)	1663829
17	30.2	1.1	4.4	chr17	68247975	68248063	(15009378)	+	(GGCGC)n	Simple_repeat	1	90	(0)	1663830
1363	20.5	14.3	6.3	chr17	72985777	72986203	(10271238)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1671371
252	20.0	1.8	1.8	chr17	72986385	72986440	(10271001)	+	MER5A1	DNA/hAT-Charlie	51	106	(60)	1671372
892	10.6	3.7	0.8	chr17	74271032	74271136	(8986305)	+	AluJo	SINE/Alu	1	105	(207)	1673817
2733	18.4	2.1	0.4	chr17	74271137	74271612	(8985829)	C	MER66B	LTR/ERV1	(0)	486	3	1673818
642	0.0	0.0	0.0	chr17	75033906	75033978	(8223463)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1675212
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
12	23.2	0.0	4.5	chr17	77140636	77140679	(6116762)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1679537
3378	15.3	1.4	0.2	chr17	77703111	77703680	(5553761)	C	L1MB3	LINE/L1	(0)	6183	5607	1680495
1813	10.2	0.0	0.4	chr17	77703681	77703936	(5553505)	C	MER66C	LTR/ERV1	(15)	540	286	1680496
1499	16.3	1.9	0.7	chr17	77703937	77704245	(5553196)	+	L1MCa	LINE/L1	932	1244	(5264)	1680497
12	14.0	7.3	2.3	chr17	77734435	77734475	(5522966)	+	(TGGCACT)n	Simple_repeat	1	44	(0)	1680550
235	26.6	6.0	6.9	chr17	77772332	77772432	(5485009)	+	LTR75_1	LTR/ERV1	278	377	(169)	1680620
209	35.0	2.7	8.9	chr17	77926757	77926811	(5330630)	C	L2c	LINE/L2	(0)	3387	3337	1680897
2455	20.2	1.2	1.8	chr17	77926812	77927300	(5330141)	C	MER66B	LTR/ERV1	(0)	486	1	1680898
2135	12.1	0.7	0.0	chr17	78297180	78297477	(4959964)	+	AluSq2	SINE/Alu	3	302	(11)	1681592
1909	19.5	2.2	3.8	chr17	78297478	78297509	(4959932)	+	MLT1A0	LTR/ERVL-MaLR	331	362	(3)	1681591
15	24.5	4.7	1.5	chr17	79009588	79009651	(4247790)	+	(GGCCGCG)n	Simple_repeat	1	67	(0)	1682840
23	11.2	0.0	0.0	chr17	79009696	79009734	(4247707)	+	(GGCTG)n	Simple_repeat	1	39	(0)	1682841
324	31.6	9.5	5.0	chr17	79045440	79045859	(4211582)	C	L2b	LINE/L2	(661)	2758	2318	1682899
2497	17.4	3.1	1.9	chr17	80152189	80152715	(3104726)	+	MER41B	LTR/ERV1	1	596	(38)	1684545
1204	17.2	18.3	4.4	chr17	80160436	80160954	(3096487)	C	LTR36	LTR/ERV1	(12)	599	6	1684561
1657	23.8	8.8	3.8	chr17	80160979	80161041	(3096400)	C	LTR49-int	LTR/ERV1	(3985)	2346	2287	1684552
1380	23.9	10.8	6.9	chr17	80161042	80161432	(3096009)	C	MER66D	LTR/ERV1	(0)	484	80	1684562
13	20.5	0.0	2.8	chr17	81346367	81346402	(1911039)	+	G-rich	Low_complexity	1	36	(0)	1686143
12	9.6	8.6	2.6	chr17	81397107	81397141	(1860300)	+	(GCGCG)n	Simple_repeat	1	38	(0)	1686228
19	17.2	0.0	0.0	chr17	81397396	81397428	(1860013)	+	A-rich	Low_complexity	1	33	(0)	1686229
2144	13.0	0.7	0.0	chr17	81872373	81872672	(1384769)	C	AluSx	SINE/Alu	(1)	311	10	1686846
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
16	5.3	0.0	0.0	chr18	3594007	3594026	(76779259)	+	(A)n	Simple_repeat	1	20	(0)	1694718
21	12.6	2.2	2.2	chr18	3594322	3594366	(76778919)	+	(CTCC)n	Simple_repeat	1	46	(0)	1694719
613	24.7	4.0	2.7	chr18	6497157	6497381	(73875904)	+	L1MEd	LINE/L1	4091	4318	(1828)	1698636
2325	18.5	2.8	6.3	chr18	6497432	6497840	(73875445)	C	MER66B	LTR/ERV1	(13)	473	68	1698640
654	25.8	11.8	5.4	chr18	9320053	9320433	(71052852)	+	MLT1G	LTR/ERVL-MaLR	176	591	(0)	1702814
21	10.5	0.0	0.0	chr18	9737308	9737338	(70635947)	+	(CA)n	Simple_repeat	1	31	(0)	1703588
1881	18.9	8.3	10.8	chr18	11307854	11308411	(69064874)	+	MER66C	LTR/ERV1	1	543	(12)	1705694
1018	25.4	5.9	3.8	chr18	11308410	11308826	(69064459)	C	MER65B	LTR/ERV1	(8)	523	98	1705695
331	5.1	0.0	0.0	chr18	12378003	12378041	(67995244)	C	FRAM	SINE/Alu	(23)	153	115	1707304
429	15.6	3.8	1.3	chr18	12378043	12378120	(67995165)	+	L1MEc	LINE/L1	137	216	(6184)	1707305
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
18	3.3	6.5	0.0	chr18	22451713	22451743	(57921542)	+	(AACAA)n	Simple_repeat	1	33	(0)	1714578
293	29.9	10.4	6.3	chr18	22451854	22452028	(57921257)	C	MIR	SINE/MIR	(67)	195	13	1714579
2966	14.3	2.3	0.6	chr18	22482105	22482582	(57890703)	+	MER66B	LTR/ERV1	1	486	(0)	1714618
6208	11.1	2.0	0.6	chr18	22482583	22482900	(57890385)	+	L1MA4A	LINE/L1	7395	7717	(5)	1714617
1384	21.5	11.3	4.6	chr18	23640096	23640382	(56732903)	+	MLT1D	LTR/ERVL-MaLR	194	499	(6)	1716581
1318	28.0	14.4	0.8	chr18	24658576	24659313	(55713972)	C	Charlie15b	DNA/hAT-Charlie	(15)	1046	192	1718312
2482	20.8	0.4	3.5	chr18	28475972	28476464	(51896821)	+	MER66B	LTR/ERV1	9	486	(0)	1723764
11783	24.2	7.6	7.5	chr18	28476494	28480844	(51892441)	+	MER66-int	LTR/ERV1	57	4411	(2265)	1723764
1540	19.7	7.1	8.0	chr18	29117304	29117853	(51255432)	C	MER66D	LTR/ERV1	(32)	523	1	1724629
338	38.5	7.2	2.1	chr18	29629397	29629480	(50743805)	C	MIR	SINE/MIR	(2)	260	171	1725289
2147	18.1	5.2	2.8	chr18	29629481	29629952	(50743333)	C	MER66B	LTR/ERV1	(0)	486	3	1725290
1889	15.1	3.3	0.7	chr18	30054543	30054834	(50318451)	+	AluSz	SINE/Alu	1	300	(12)	1725819
2238	13.4	2.9	17.5	chr18	31015837	31016406	(49356879)	+	MER66D	LTR/ERV1	1	484	(0)	1727098
754	29.7	7.9	6.7	chr18	31016633	31017007	(49356278)	+	LTR16E1	LTR/ERVL	157	536	(2)	1727099
16	25.7	1.8	1.7	chr18	31102451	31102507	(49270778)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	1727208
1087	6.7	0.0	4.0	chr18	32017986	32018135	(48355150)	C	AluSz	SINE/Alu	(167)	145	2	1728648
1562	21.1	1.2	1.2	chr18	32138105	32138507	(48234778)	C	L1MD	LINE/L1	(967)	5179	4777	1728933
2463	16.7	1.2	1.4	chr18	32138511	32138982	(48234303)	C	MER41B	LTR/ERV1	(39)	595	105	1728935
1907	19.6	14.0	2.3	chr18	32993197	32993624	(47379661)	+	MER66B	LTR/ERV1	1	486	(0)	1730162
458	27.7	2.8	7.8	chr18	32993676	32993828	(47379457)	+	L2c	LINE/L2	3243	3387	(0)	1730163
1633	23.4	6.3	2.9	chr18	33116388	33116801	(47256484)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	196	1730309
3811	20.8	3.7	2.3	chr18	33116812	33117528	(47255757)	+	ERVL-B4-int	LTR/ERVL	3620	4322	(1392)	1730310
803	22.5	4.0	4.0	chr18	34458267	34458461	(45914824)	+	L1ME3G	LINE/L1	89	284	(640)	1731984
2267	15.8	3.3	15.4	chr18	34458462	34459014	(45914271)	C	MER66D	LTR/ERV1	(0)	484	1	1731985
473	28.2	1.5	4.9	chr18	34600794	34601035	(45772250)	C	MLT1I	LTR/ERVL-MaLR	(33)	378	35	1732162
2750	16.7	2.5	1.5	chr18	34601018	34601492	(45771793)	C	MER66B	LTR/ERV1	(6)	480	1	1732163
970	20.1	3.8	5.9	chr18	35173794	35174116	(45199169)	+	MER46C	DNA/TcMar-Tigger	2	317	(21)	1732944
202	23.1	0.0	0.0	chr18	35174121	35174159	(45199126)	C	MIRc	SINE/MIR	(117)	151	113	1732945
864	15.3	5.8	0.6	chr18	35174227	35174390	(45198895)	+	MLT1B	LTR/ERVL-MaLR	1	173	(217)	1732946
20	31.6	0.0	0.0	chr18	35174406	35174468	(45198817)	+	(CTCT)n	Simple_repeat	1	63	(0)	1732947
12	16.8	7.5	0.0	chr18	35174475	35174514	(45198771)	+	(CCCCCA)n	Simple_repeat	1	43	(0)	1732948
986	19.6	0.0	7.3	chr18	35174526	35174745	(45198540)	+	MLT1B	LTR/ERVL-MaLR	187	390	(0)	1732946
2064	10.8	1.1	2.8	chr18	35288987	35289272	(45084013)	C	AluSx	SINE/Alu	(31)	281	1	1733111
868	23.8	8.2	5.0	chr18	35386658	35386988	(44986297)	+	LTR41	LTR/ERVL	88	515	(253)	1733240
957	24.9	4.7	1.3	chr18	35386992	35387219	(44986066)	+	ERVL-E-int	LTR/ERVL	3960	4195	(1472)	1733242
4323	26.2	3.5	2.0	chr18	35387235	35388405	(44984880)	+	ERVL-E-int	LTR/ERVL	4168	5355	(312)	1733242
259	27.5	0.0	0.0	chr18	36330334	36330402	(44042883)	+	MIRc	SINE/MIR	196	264	(4)	1734651
34	0.0	0.0	0.0	chr18	36330839	36330870	(44042415)	+	(TGAG)n	Simple_repeat	1	32	(0)	1734652
15	14.4	0.0	0.0	chr18	40036203	40036226	(40337059)	+	(T)n	Simple_repeat	1	24	(0)	1739485
14	6.9	9.7	0.0	chr18	40036227	40036233	(40337052)	+	(TTCTT)n	Simple_repeat	1	34	(0)	1739486
2491	20.0	2.7	0.2	chr18	43418434	43418899	(36954386)	+	MER66A	LTR/ERV1	1	478	(0)	1744170
4822	15.0	3.6	1.1	chr18	43902344	43903000	(36470285)	+	Tigger4	DNA/TcMar-Tigger	1859	2544	(187)	1744812
2301	20.3	3.6	1.1	chr18	43903001	43903464	(36469821)	C	MER66A	LTR/ERV1	(2)	476	1	1744813
333	24.7	5.0	0.4	chr18	47772258	47772376	(32600909)	+	MIR3	SINE/MIR	32	164	(104)	1750779
382	24.0	0.0	0.0	chr18	47772946	47773020	(32600265)	C	Charlie4z	DNA/hAT-Charlie	(6)	161	87	1750780
2319	16.9	2.4	5.1	chr18	50141112	50141584	(30231701)	+	MER66B	LTR/ERV1	27	486	(0)	1754684
374	18.8	3.6	1.2	chr18	50141619	50141699	(30231586)	C	MER77B	LTR/ERVL	(478)	222	140	1754683
279	18.4	0.0	0.0	chr18	50141693	50141741	(30231544)	C	MER77B	LTR/ERVL	(644)	56	8	1754683
1002	28.2	2.4	8.5	chr18	50308145	50308543	(30064742)	+	LTR16A	LTR/ERVL	7	380	(71)	1754933
16	21.6	0.0	0.0	chr18	54358082	54358113	(26015172)	+	(T)n	Simple_repeat	1	32	(0)	1761121
22	13.0	0.0	0.0	chr18	54828793	54828826	(25544459)	+	(TG)n	Simple_repeat	1	34	(0)	1761828
13	30.2	2.8	2.7	chr18	63367241	63367312	(17005973)	+	G-rich	Low_complexity	1	74	(0)	1774949
2097	18.6	7.2	3.0	chr18	63900345	63900809	(16472476)	C	MER66B	LTR/ERV1	(0)	486	1	1775757
2392	14.8	15.2	2.3	chr18	64942297	64942766	(15430519)	C	MER66C	LTR/ERV1	(14)	541	1	1777075
2628	19.2	1.2	1.2	chr18	66039129	66039614	(14333671)	+	MER66B	LTR/ERV1	1	486	(0)	1778624
808	24.7	1.1	4.6	chr18	66039615	66039695	(14333590)	C	MER5A	DNA/hAT-Charlie	(108)	81	1	1778623
2623	18.6	2.5	0.2	chr18	74060525	74060999	(6312286)	+	MER66B	LTR/ERV1	1	486	(0)	1789412
18	4.7	0.0	0.0	chr18	74551910	74551931	(5821354)	+	(A)n	Simple_repeat	1	22	(0)	1790033
17	8.4	7.9	0.0	chr19	1082038	1082075	(57535541)	+	(GGAGCT)n	Simple_repeat	1	41	(0)	1798197
12	20.8	0.0	2.9	chr19	1082493	1082527	(57535089)	+	G-rich	Low_complexity	1	35	(0)	1798198
11	18.4	2.4	4.8	chr19	1508287	1508327	(57109289)	+	G-rich	Low_complexity	1	42	(0)	1798898
239	29.6	9.1	0.6	chr19	1508661	1508757	(57108859)	C	MIR3	SINE/MIR	(85)	123	28	1798899
30	0.0	0.0	0.0	chr19	1508780	1508807	(57108809)	+	(CATT)n	Simple_repeat	1	28	(0)	1798900
15	34.1	1.3	1.9	chr19	1812350	1812451	(56805165)	+	G-rich	Low_complexity	1	101	(0)	1799565
214	26.2	2.1	2.2	chr19	1813101	1813179	(56804437)	C	L2c	LINE/L2	(1)	3386	3299	1799566
2203	11.5	0.0	0.0	chr19	2840491	2840786	(55776830)	C	AluSx1	SINE/Alu	(16)	296	1	1801761
267	28.1	1.9	7.8	chr19	3081474	3081637	(55535979)	C	MIRb	SINE/MIR	(100)	168	19	1802359
595	9.5	4.0	0.0	chr19	3081738	3081832	(55535784)	C	MER66B	LTR/ERV1	(1)	485	387	1802360
2334	11.4	0.0	0.0	chr19	3081837	3082142	(55535474)	C	AluSx	SINE/Alu	(6)	306	1	1802361
1396	17.4	0.0	0.4	chr19	3265055	3265285	(55352331)	+	AluJb	SINE/Alu	1	230	(82)	1802789
1115	15.2	2.5	0.0	chr19	3265306	3265502	(55352114)	C	MER66B	LTR/ERV1	(29)	457	256	1802790
1295	13.8	6.1	0.0	chr19	3265564	3265794	(55351822)	+	MER41B	LTR/ERV1	281	526	(108)	1802791
1070	21.7	5.9	0.0	chr19	3743405	3743611	(54874005)	C	MER58A	DNA/hAT-Charlie	(0)	224	5	1803936
568	28.4	5.9	1.2	chr19	3743651	3743892	(54873724)	C	MLT1J	LTR/ERVL-MaLR	(253)	259	6	1803937
17	0.0	0.0	0.0	chr19	4089081	4089099	(54528517)	+	(A)n	Simple_repeat	1	19	(0)	1804725
769	25.0	1.9	0.0	chr19	4089935	4090094	(54527522)	C	FRAM	SINE/Alu	(13)	163	1	1804726
1021	27.6	9.7	3.8	chr19	4139518	4140150	(54477466)	C	L2a	LINE/L2	(238)	3188	2499	1804841
250	32.3	13.9	2.9	chr19	5679904	5680075	(52937541)	C	MIR3	SINE/MIR	(43)	225	30	1808574
183	24.3	0.0	0.0	chr19	5680176	5680212	(52937404)	C	MIRc	SINE/MIR	(117)	151	115	1808575
1986	16.1	0.0	1.3	chr19	6126095	6126392	(52491224)	C	AluJr	SINE/Alu	(18)	294	1	1809479
21	0.0	0.0	0.0	chr19	6126404	6126426	(52491190)	+	(AC)n	Simple_repeat	1	23	(0)	1809480
1379	25.1	9.3	6.3	chr19	6126478	6126984	(52490632)	C	LTR55	LTR/ERVL?	(24)	524	1	1809481
675	26.0	1.9	1.1	chr19	6790353	6790540	(51827076)	C	MLT1C	LTR/ERVL-MaLR	(0)	505	284	1811171
3120	15.0	1.2	0.0	chr19	6790541	6791020	(51826596)	C	MER66B	LTR/ERV1	(0)	486	1	1811172
2469	16.9	0.4	5.7	chr19	6803864	6804187	(51813429)	+	L1MC1	LINE/L1	5802	6106	(227)	1811208
1166	16.5	6.7	10.9	chr19	6804188	6804408	(51813208)	C	MER66B	LTR/ERV1	(0)	486	273	1811211
2010	14.6	0.0	3.4	chr19	7577723	7578045	(51039571)	+	AluSx1	SINE/Alu	1	312	(0)	1813263
2569	16.7	3.4	4.0	chr19	7578112	7578515	(51039101)	C	MER66A	LTR/ERV1	(1)	477	76	1813264
1702	12.9	9.7	0.7	chr19	7578516	7578787	(51038829)	C	AluSg7	SINE/Alu	(8)	301	3	1813265
2169	9.1	0.3	0.0	chr19	7749877	7750162	(50867454)	+	AluSp	SINE/Alu	11	297	(16)	1813646
3196	16.6	0.2	2.6	chr19	7750163	7750275	(50867341)	+	MER66C	LTR/ERV1	442	548	(7)	1813643
9609	10.8	7.5	3.8	chr19	7756911	7758476	(50859140)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1813660
318	37.0	5.4	0.4	chr19	8525225	8525377	(50092239)	C	L2	LINE/L2	(436)	2983	2828	1815487
17	31.5	2.6	0.0	chr19	8609153	8609230	(50008386)	+	(TGTGTG)n	Simple_repeat	1	80	(0)	1815704
29	0.0	0.0	0.0	chr19	8609235	8609259	(50008357)	+	(TG)n	Simple_repeat	1	25	(0)	1815705
2505	7.4	0.0	1.0	chr19	9163681	9163992	(49453624)	C	AluY	SINE/Alu	(2)	309	1	1816934
355	24.0	4.6	0.9	chr19	9163994	9164098	(49453518)	C	L1MC4	LINE/L1	(5418)	1090	982	1816935
1310	16.9	4.9	2.3	chr19	9164101	9164360	(49453256)	C	MER66A	LTR/ERV1	(0)	478	212	1816936
909	7.4	3.9	0.8	chr19	9164366	9164488	(49453128)	+	THE1B	LTR/ERVL-MaLR	229	355	(9)	1816937
252	17.5	23.1	3.6	chr19	9309485	9309567	(49308049)	C	MER5A	DNA/hAT-Charlie	(0)	189	86	1817218
20	9.1	2.8	0.0	chr19	9309728	9309763	(49307853)	+	(GGGCA)n	Simple_repeat	1	37	(0)	1817219
17	15.8	3.6	5.3	chr19	9310184	9310238	(49307378)	+	G-rich	Low_complexity	1	57	(0)	1817220
2401	18.1	2.1	2.1	chr19	9552969	9553454	(49064162)	+	MER66B	LTR/ERV1	1	486	(0)	1817629
938	18.8	0.0	3.0	chr19	9553455	9553505	(49064111)	+	AluJb	SINE/Alu	242	288	(24)	1817628
253	27.1	0.9	5.3	chr19	9553507	9553619	(49063997)	C	MER4-int	LTR/ERV1	(2543)	4096	3989	1817630
3136	11.5	3.2	2.6	chr19	9673926	9674425	(48943191)	C	LTR10F	LTR/ERV1	(7)	504	2	1817896
700	13.8	0.0	0.0	chr19	9674426	9674534	(48943082)	+	AluSx	SINE/Alu	194	302	(10)	1817895
731	17.2	0.0	0.0	chr19	9675436	9675551	(48942065)	+	FLAM_C	SINE/Alu	1	116	(27)	1817897
2162	13.8	0.0	0.3	chr19	11695366	11695676	(46921940)	+	AluJb	SINE/Alu	1	310	(2)	1822953
15	4.7	0.0	0.0	chr19	12295241	12295262	(46322354)	+	(GGGT)n	Simple_repeat	1	22	(0)	1824168
949	25.0	4.6	4.3	chr19	12295333	12295587	(46322029)	C	LTR8A	LTR/ERV1	(0)	727	472	1824169
767	14.1	0.7	6.3	chr19	12295588	12295709	(46321907)	+	FLAM_C	SINE/Alu	1	120	(23)	1824170
208	22.7	0.0	0.0	chr19	12301485	12301543	(46316073)	C	L2b	LINE/L2	(254)	3172	3110	1824187
1415	20.9	1.0	2.6	chr19	12301574	12301875	(46315741)	+	AluJr	SINE/Alu	2	298	(14)	1824188
27	0.0	0.0	0.0	chr19	12401542	12401567	(46216049)	+	(T)n	Simple_repeat	1	26	(0)	1824374
36	0.0	0.0	0.0	chr19	12401570	12401600	(46216016)	+	(GA)n	Simple_repeat	1	31	(0)	1824375
2029	8.1	2.5	1.8	chr19	12401601	12401872	(46215744)	C	AluSg	SINE/Alu	(35)	275	2	1824376
2193	8.4	2.0	1.7	chr19	12441380	12441676	(46175940)	C	AluSg	SINE/Alu	(11)	299	2	1824455
2341	8.1	0.7	0.0	chr19	12680834	12681131	(45936485)	C	AluSx3	SINE/Alu	(11)	300	1	1824984
2540	4.4	0.3	0.3	chr19	12682007	12682304	(45935312)	C	AluYc	SINE/Alu	(0)	299	2	1824985
538	28.6	4.9	0.0	chr19	13632766	13632919	(44984697)	C	LTR33	LTR/ERVL	(339)	176	15	1827333
547	19.1	8.4	7.0	chr19	13654023	13654256	(44963360)	+	MLT1H2	LTR/ERVL-MaLR	193	549	(0)	1827394
3971	12.6	3.1	2.6	chr19	13654281	13654590	(44963026)	+	MER39B	LTR/ERV1	6	328	(325)	1827399
2744	18.9	0.8	0.6	chr19	13654591	13655074	(44962542)	C	MER66B	LTR/ERV1	(1)	485	1	1827400
194	19.6	1.8	9.7	chr19	13794921	13794982	(44822634)	C	MIRc	SINE/MIR	(146)	122	66	1827823
1464	29.2	10.1	0.0	chr19	14048480	14048917	(44568699)	+	LTR16C	LTR/ERVL	3	489	(0)	1828450
2247	11.4	0.0	2.3	chr19	14361711	14361878	(44255738)	+	AluSx	SINE/Alu	137	301	(11)	1829299
1100	25.0	11.6	1.0	chr19	14361879	14362377	(44255239)	C	L2a	LINE/L2	(307)	3119	2565	1829295
2872	15.4	1.7	7.9	chr19	14849178	14849344	(43768272)	C	L1MA8	LINE/L1	(2)	6289	6126	1830498
213	23.2	7.9	5.8	chr19	15222997	15223083	(43394533)	+	L2c	LINE/L2	3108	3196	(191)	1831420
14	5.0	0.0	0.0	chr19	15223174	15223194	(43394422)	+	(ATGA)n	Simple_repeat	1	21	(0)	1831421
229	16.7	0.0	0.0	chr19	15223195	15223230	(43394386)	C	tRNA-Gly-GGG	tRNA	(38)	36	1	1831422
38	0.0	0.0	0.0	chr19	15223242	15223276	(43394340)	+	(TGAG)n	Simple_repeat	1	35	(0)	1831423
204	23.9	2.1	0.0	chr19	17246881	17246926	(41370690)	C	L2b	LINE/L2	(11)	3364	3318	1835835
201	20.4	2.2	0.0	chr19	17336676	17336719	(41280897)	+	MamTip2	DNA/hAT-Tip100	100	144	(161)	1836059
382	32.4	9.2	0.0	chr19	17336833	17337039	(41280577)	C	L2b	LINE/L2	(158)	3217	2990	1836060
180	34.1	5.5	0.0	chr19	17337067	17337151	(41280465)	C	L3	LINE/CR1	(3010)	1089	1000	1836061
220	27.3	2.0	8.3	chr19	17741696	17741803	(40875813)	C	L2b	LINE/L2	(209)	3166	3066	1837156
203	37.8	3.1	1.3	chr19	17741819	17741976	(40875640)	C	L2b	LINE/L2	(455)	2964	2804	1837156
616	16.7	1.8	0.0	chr19	17742052	17742159	(40875457)	C	MER66B	LTR/ERV1	(11)	544	435	1837157
1093	15.7	6.1	8.5	chr19	17742160	17742324	(40875292)	C	AluJb	SINE/Alu	(0)	312	137	1837158
1861	15.5	0.0	1.4	chr19	17742325	17742620	(40874996)	C	AluJb	SINE/Alu	(20)	292	1	1837159
15	14.9	2.6	2.5	chr19	17984891	17984929	(40632687)	+	(TCCTCCC)n	Simple_repeat	1	40	(0)	1837783
2131	13.9	0.3	0.0	chr19	18184151	18184453	(40433163)	+	AluSx	SINE/Alu	2	305	(7)	1838302
515	18.6	0.0	0.0	chr19	18184603	18184704	(40432912)	C	MER66C	LTR/ERV1	(14)	541	440	1838303
1786	16.6	1.1	0.3	chr19	18184707	18184989	(40432627)	C	AluJo	SINE/Alu	(15)	297	13	1838304
373	26.3	8.8	0.0	chr19	19186211	19186366	(39431250)	+	L2a	LINE/L2	2957	3127	(299)	1840449
2408	11.1	3.2	1.9	chr19	19186379	19186745	(39430871)	+	THE1C	LTR/ERVL-MaLR	4	375	(0)	1840450
21	26.4	2.8	0.0	chr19	19618578	19618649	(38998967)	+	G-rich	Low_complexity	1	74	(0)	1841312
2153	12.2	1.0	0.0	chr19	19686853	19687156	(38930460)	+	AluSz6	SINE/Alu	1	307	(5)	1841442
12	27.7	0.0	2.2	chr19	19687319	19687363	(38930253)	+	(CTCC)n	Simple_repeat	1	45	(0)	1841443
356	26.3	4.8	0.0	chr19	19777091	19777208	(38840408)	+	HERVL40-int	LTR/ERVL	3762	3885	(1645)	1841600
2226	8.5	0.0	1.4	chr19	21358222	21358504	(37259112)	C	AluSg	SINE/Alu	(31)	279	1	1843903
300	15.7	5.4	0.0	chr19	21358506	21358575	(37259041)	+	MER33	DNA/hAT-Charlie	236	309	(15)	1843904
300	8.9	1.8	3.5	chr19	21396677	21396734	(37220882)	+	MER33	DNA/hAT-Charlie	253	309	(15)	1843970
2270	8.2	1.0	2.6	chr19	23249694	23249833	(35367783)	C	AluSx	SINE/Alu	(175)	137	1	1846397
2212	14.8	2.5	14.8	chr19	23249834	23249884	(35367732)	+	MER57E3	LTR/ERV1	441	487	(0)	1846395
624	15.6	5.4	0.7	chr19	23250796	23250937	(35366679)	C	MER33	DNA/hAT-Charlie	(15)	309	161	1846399
1833	12.1	3.1	4.7	chr19	23273428	23273725	(35343891)	+	AluSz	SINE/Alu	1	293	(19)	1846448
2208	20.3	2.7	2.9	chr19	23273726	23273754	(35343862)	+	MER57E3	LTR/ERV1	459	481	(6)	1846447
930	21.2	7.3	5.4	chr19	23687581	23687759	(34929857)	C	MER33	DNA/hAT-Charlie	(16)	308	121	1847042
1530	11.6	7.2	0.0	chr19	24033971	24034203	(34583413)	C	AluSz6	SINE/Alu	(18)	294	44	1847496
16	5.3	0.0	0.0	chr19	32345270	32345289	(26272327)	+	(A)n	Simple_repeat	1	20	(0)	1854638
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
2775	17.2	1.0	1.2	chr19	32573284	32573766	(26043850)	+	MER66B	LTR/ERV1	1	482	(4)	1855070
348	14.1	0.0	1.5	chr19	32573807	32573871	(26043745)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	324	1855071
1249	18.1	11.3	6.5	chr19	32573937	32574213	(26043403)	+	AluJr4	SINE/Alu	1	292	(20)	1855072
3807	9.8	0.2	11.1	chr19	33080508	33080720	(25536896)	+	L1PA15	LINE/L1	5976	6163	(2)	1856120
2736	16.6	0.8	3.6	chr19	33450773	33451272	(25166344)	+	MER66B	LTR/ERV1	1	486	(0)	1856783
3146	14.8	2.6	2.8	chr19	33660426	33660967	(24956649)	+	MER66C	LTR/ERV1	1	541	(14)	1857132
363	11.4	20.2	5.7	chr19	33661110	33661197	(24956419)	+	AluJo	SINE/Alu	65	168	(144)	1857133
2242	8.5	1.3	3.0	chr19	34141844	34142148	(24475468)	C	AluSc8	SINE/Alu	(0)	311	12	1857992
1252	14.7	8.0	2.8	chr19	34142149	34142287	(24475329)	+	L1M5	LINE/L1	5312	5445	(719)	1857990
2885	17.1	1.2	0.4	chr19	34142288	34142763	(24474853)	C	MER66B	LTR/ERV1	(0)	486	7	1857993
2232	11.8	0.0	0.0	chr19	34470525	34470821	(24146795)	C	AluSx3	SINE/Alu	(14)	297	1	1858709
209	36.1	4.7	3.9	chr19	34471260	34471368	(24146248)	C	L3	LINE/CR1	(817)	3282	3169	1858710
2572	15.9	3.8	0.7	chr19	34776649	34777104	(23840512)	C	MER66B	LTR/ERV1	(15)	471	1	1859118
415	26.0	4.0	2.3	chr19	34793435	34793607	(23824009)	C	MER113	DNA/hAT-Charlie	(91)	430	255	1859147
1902	20.7	6.5	5.0	chr19	34793623	34793915	(23823701)	C	MER41B	LTR/ERV1	(36)	598	214	1859148
2180	13.2	1.9	4.5	chr19	34793916	34794289	(23823327)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1859149
2716	14.8	2.9	1.3	chr19	34834559	34835036	(23782580)	+	MER66B	LTR/ERV1	1	486	(0)	1859204
599	29.4	6.1	1.6	chr19	34835175	34835423	(23782193)	C	L1MEg	LINE/L1	(5562)	522	262	1859205
2319	15.5	4.5	5.3	chr19	34979867	34980356	(23637260)	C	MER66B	LTR/ERV1	(0)	486	1	1859434
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
2031	14.6	0.0	0.0	chr19	36379389	36379690	(22237926)	C	AluJo	SINE/Alu	(10)	302	1	1862427
1724	14.1	0.7	1.8	chr19	36417941	36418217	(22199399)	C	AluJr	SINE/Alu	(38)	274	1	1862502
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
15	16.8	0.0	0.0	chr19	36528950	36528976	(22088640)	+	(GT)n	Simple_repeat	1	27	(0)	1862728
19	21.8	5.0	1.6	chr19	36604933	36604992	(22012624)	+	(CA)n	Simple_repeat	1	63	(0)	1862875
13	14.0	0.0	5.7	chr19	36605285	36605319	(22012297)	+	(GCGCAG)n	Simple_repeat	1	35	(0)	1862876
18	19.3	2.3	2.3	chr19	36605646	36605688	(22011928)	+	(CG)n	Simple_repeat	1	44	(0)	1862877
320	20.9	2.9	0.0	chr19	36850363	36850429	(21767187)	C	MER67D	LTR/ERV1	(1)	513	445	1863382
711	18.1	11.3	3.1	chr19	36850413	36850663	(21766953)	C	MER31B	LTR/ERV1	(74)	392	1	1863383
12	19.4	0.0	5.1	chr19	37370707	37370745	(21246871)	+	(CATTCA)n	Simple_repeat	1	39	(0)	1864323
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
2286	8.3	1.0	1.0	chr19	37466348	37466649	(21150967)	+	AluSp	SINE/Alu	1	302	(11)	1864479
366	25.7	6.6	0.0	chr19	37692539	37692651	(20924965)	C	L1MEg	LINE/L1	(4033)	2051	1931	1864911
2274	6.7	1.1	0.7	chr19	37692724	37693007	(20924609)	+	AluSx3	SINE/Alu	1	285	(26)	1864912
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
19	31.0	0.0	1.4	chr19	38336494	38336564	(20281052)	+	G-rich	Low_complexity	1	71	(0)	1866435
268	26.3	49.5	0.0	chr19	38684077	38684209	(19933407)	+	MIR	SINE/MIR	60	259	(3)	1867246
15	8.0	0.0	3.5	chr19	38684748	38684776	(19932840)	+	(TCTTT)n	Simple_repeat	1	29	(0)	1867247
13	21.9	0.0	2.6	chr19	38975822	38975860	(19641756)	+	(GCGG)n	Simple_repeat	1	39	(0)	1867893
28	8.6	0.0	0.0	chr19	42387652	42387689	(16229927)	+	(T)n	Simple_repeat	1	38	(0)	1875173
366	22.6	7.1	2.0	chr19	42396641	42396773	(16220843)	+	MSR1	Satellite	1	139	(3)	1875197
402	24.8	7.5	8.6	chr19	43934794	43934956	(14682660)	C	MIR	SINE/MIR	(40)	222	62	1877949
390	27.7	5.7	0.7	chr19	43951581	43951729	(14665887)	+	MIR	SINE/MIR	83	239	(23)	1877972
273	29.1	8.5	3.8	chr19	43984557	43984713	(14632903)	+	MIR	SINE/MIR	70	234	(28)	1878008
2202	9.8	0.7	1.3	chr19	43985056	43985360	(14632256)	C	AluSz6	SINE/Alu	(9)	303	1	1878009
14	12.7	0.0	0.0	chr19	44025683	44025708	(14591908)	+	(TTGT)n	Simple_repeat	1	26	(0)	1878072
1192	10.6	0.3	0.0	chr19	44456469	44457877	(14159739)	C	ACRO1	Satellite/acro	(55)	1412	1	1878760
2798	13.4	12.0	0.8	chr19	44585523	44586002	(14031614)	C	MER66C	LTR/ERV1	(14)	541	1	1879047
678	9.0	12.3	0.0	chr19	44845398	44845497	(13772119)	+	AluJr	SINE/Alu	1	114	(198)	1879786
22	33.3	0.0	1.2	chr19	44845597	44845676	(13771940)	+	GA-rich	Low_complexity	1	80	(0)	1879787
216	25.9	8.6	1.2	chr19	45139881	45139966	(13477650)	+	L2a	LINE/L2	3017	3109	(317)	1880554
207	30.2	4.0	5.8	chr19	45506393	45506517	(13111099)	+	MIR3	SINE/MIR	50	175	(33)	1881493
18	14.9	0.0	7.7	chr19	45506823	45506874	(13110742)	+	(CCCAC)n	Simple_repeat	1	52	(0)	1881494
2103	7.9	0.7	6.9	chr19	46416109	46416289	(12201327)	+	AluSx	SINE/Alu	136	297	(15)	1883603
408	31.6	3.6	5.1	chr19	46416290	46416337	(12201279)	+	L2a	LINE/L2	2852	2898	(521)	1883602
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
24	20.0	0.0	0.0	chr19	46416949	46416994	(12200622)	+	(T)n	Simple_repeat	1	46	(0)	1883606
2128	10.3	2.4	0.0	chr19	46459549	46459830	(12157786)	C	AluSx1	SINE/Alu	(23)	289	1	1883726
3020	17.2	0.8	0.6	chr19	46459901	46460385	(12157231)	C	MER66B	LTR/ERV1	(0)	486	1	1883727
283	36.0	5.4	2.8	chr19	46633644	46633823	(11983793)	+	MIRb	SINE/MIR	9	193	(75)	1884156
36	18.0	0.0	10.7	chr19	46634355	46634494	(11983122)	+	(CCCTG)n	Simple_repeat	1	140	(0)	1884157
12	25.8	0.0	0.0	chr19	47273279	47273315	(11344301)	+	G-rich	Low_complexity	1	37	(0)	1885715
355	21.2	3.4	5.6	chr19	48203649	48203738	(10413878)	+	L2a	LINE/L2	3338	3425	(1)	1888195
21	30.9	0.0	3.3	chr19	48713895	48713984	(9903632)	+	(CCGGAG)n	Simple_repeat	1	90	(0)	1889449
14	16.9	2.3	4.4	chr19	48714440	48714483	(9903133)	+	(CGCGG)n	Simple_repeat	1	45	(0)	1889450
13	18.7	0.0	5.0	chr19	48714563	48714602	(9903014)	+	G-rich	Low_complexity	1	40	(0)	1889451
294	27.5	0.0	3.8	chr19	48714643	48714748	(9902868)	C	MSR1	Satellite	(7)	104	3	1889452
15	0.0	0.0	5.0	chr19	48836426	48836445	(9781171)	+	(TC)n	Simple_repeat	1	20	(0)	1889738
716	18.0	1.4	1.6	chr19	48836592	48837072	(9780544)	+	MSR1	Satellite	1	480	(0)	1889739
13	15.4	2.5	4.9	chr19	49534118	49534157	(9083459)	+	G-rich	Low_complexity	1	41	(0)	1891317
13	22.0	4.1	2.0	chr19	49638637	49638685	(8978931)	+	(GAGCTCA)n	Simple_repeat	1	51	(0)	1891593
355	35.4	3.0	4.9	chr19	50678035	50678239	(7939377)	C	MIRb	SINE/MIR	(34)	234	34	1894080
12	24.5	4.9	3.1	chr19	50678327	50678387	(7939229)	+	GA-rich	Low_complexity	1	64	(0)	1894081
2088	12.2	2.3	0.0	chr19	50740499	50740800	(7876816)	+	AluSx1	SINE/Alu	1	309	(3)	1894212
2089	17.3	5.5	11.4	chr19	50740801	50740942	(7876674)	+	MER66A	LTR/ERV1	383	477	(1)	1894211
383	20.5	1.1	0.8	chr19	50805116	50805262	(7812354)	C	MSR1	Satellite	(17)	147	1	1894379
2248	13.1	1.1	2.3	chr19	50899480	50899992	(7717624)	C	MER66C	LTR/ERV1	(17)	538	92	1894553
1704	18.6	4.0	0.8	chr19	50994477	50994888	(7622728)	+	MER66A	LTR/ERV1	27	484	(0)	1894774
2838	11.9	3.0	0.0	chr19	51903864	51904282	(6713334)	+	MER57A1	LTR/ERV1	1	432	(0)	1896457
1095	10.6	4.7	3.6	chr19	51904283	51904415	(6713201)	+	LTR8	LTR/ERV1	556	691	(0)	1896456
1495	27.8	1.2	1.9	chr19	51905172	51905603	(6712013)	C	MER57F	LTR/ERV1	(6)	429	1	1896458
12	29.1	3.0	2.9	chr19	52820852	52820917	(5796699)	+	(TCTC)n	Simple_repeat	1	68	(0)	1898247
265	22.7	2.3	0.0	chr19	53394548	53394657	(5222959)	C	FRAM	SINE/Alu	(17)	116	4	1899262
12	24.4	0.0	0.0	chr19	53468212	53468245	(5149371)	+	(CCC)n	Simple_repeat	1	34	(0)	1899412
6751	11.8	1.5	0.5	chr19	53468335	53469326	(5148290)	C	LTR5B	LTR/ERVK	(0)	1002	1	1899413
253	18.6	2.8	6.7	chr19	53793051	53793125	(4824491)	C	MER20	DNA/hAT-Charlie	(63)	156	85	1900254
1336	18.0	0.0	7.1	chr19	53793213	53793507	(4824109)	C	AluJr	SINE/Alu	(38)	274	1	1900255
19	21.4	3.3	1.6	chr19	53867815	53867875	(4749741)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	1900475
14	21.1	0.0	2.5	chr19	53943603	53943642	(4673974)	+	G-rich	Low_complexity	1	40	(0)	1900628
524	31.2	5.6	6.1	chr19	53943989	53944135	(4673481)	C	MIRb	SINE/MIR	(61)	207	59	1900629
2228	9.8	0.3	0.0	chr19	54080691	54080975	(4536641)	+	AluSp	SINE/Alu	1	286	(27)	1901017
28	0.0	0.0	0.0	chr19	54080976	54081002	(4536614)	+	(AAAAT)n	Simple_repeat	1	27	(0)	1901018
235	28.5	9.4	6.3	chr19	54081003	54081147	(4536469)	+	MER113	DNA/hAT-Charlie	377	519	(2)	1901016
513	20.8	0.7	6.5	chr19	55032681	55032834	(3584782)	+	L1MB5	LINE/L1	5873	6017	(157)	1902829
14	13.0	5.9	0.0	chr19	55341277	55341310	(3276306)	+	(CCCTC)n	Simple_repeat	1	36	(0)	1903542
16	29.0	2.0	0.0	chr19	55341572	55341636	(3275980)	+	(TG)n	Simple_repeat	1	66	(0)	1903543
543	25.9	9.0	0.0	chr19	55447550	55447711	(3169905)	+	MER91A	DNA/hAT-Tip100	2	179	(17)	1903757
231	16.7	0.0	2.0	chr19	55447755	55447803	(3169813)	+	Zaphod2	DNA/hAT-Tip100	3470	3517	(7)	1903758
589	10.8	7.6	0.1	chr19	55448013	55449159	(3168457)	+	(AC)n	Simple_repeat	1	1234	(0)	1903759
253	30.3	8.2	0.6	chr19	55454640	55454818	(3162798)	+	L2a	LINE/L2	3059	3252	(174)	1903765
196	34.5	13.0	1.1	chr19	56538018	56538193	(2079423)	C	L2a	LINE/L2	(270)	3156	2957	1905961
308	31.4	8.7	0.0	chr19	56566749	56566853	(2050763)	C	L2a	LINE/L2	(23)	3403	3289	1906003
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
555	28.1	11.2	2.5	chr19	57435976	57436252	(1181364)	C	L2	LINE/L2	(666)	2753	2450	1907803
1927	16.5	12.0	1.5	chr19	57569209	57569609	(1048007)	+	MER66A	LTR/ERV1	27	475	(3)	1907993
2231	9.7	1.4	0.0	chr19	57569741	57570028	(1047588)	+	AluSx	SINE/Alu	2	293	(19)	1907995
3606	11.2	5.4	1.1	chr19	57579173	57579723	(1037893)	C	MER4D1	LTR/ERV1	(324)	576	1	1908004
634	32.0	5.4	5.1	chr19	57614748	57615297	(1002319)	C	L2	LINE/L2	(539)	2880	2329	1908052
1218	6.9	0.0	0.0	chr19	57681471	57681614	(936002)	C	AluSx	SINE/Alu	(168)	144	1	1908160
217	25.0	1.1	18.5	chr19	57682661	57682768	(934848)	C	MIR	SINE/MIR	(142)	120	32	1908161
2161	13.3	0.3	0.0	chr19	57769005	57769312	(848304)	+	AluSz6	SINE/Alu	1	309	(3)	1908289
2187	4.8	10.6	0.0	chr19	57770154	57770424	(847192)	C	AluSx	SINE/Alu	(9)	303	1	1908290
2032	20.9	4.3	8.9	chr19	57847313	57847875	(769741)	+	MER41B	LTR/ERV1	10	621	(13)	1908428
1977	11.5	4.6	0.0	chr19	57847980	57848267	(769349)	C	AluSc8	SINE/Alu	(8)	303	2	1908429
2441	6.8	0.0	3.4	chr19	57916811	57917132	(700484)	+	AluYm1	SINE/Alu	1	311	(0)	1908540
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
1976	14.6	0.0	0.7	chr19	58003372	58003666	(613950)	+	AluJo	SINE/Alu	4	296	(16)	1908687
3638	6.1	5.0	3.9	chr19	58277944	58278458	(339158)	+	MER41C	LTR/ERV1	1	521	(0)	1909251
2337	7.8	1.0	0.0	chr19	58543417	58543711	(73905)	C	AluSq2	SINE/Alu	(15)	298	1	1909716
564	25.6	0.7	0.0	chr19	58543719	58543855	(73761)	C	AluJb	SINE/Alu	(39)	273	136	1909717
17	22.3	3.7	5.9	chr2	676986	677067	(241516462)	+	(GGCCC)n	Simple_repeat	1	85	(0)	1911465
2501	15.2	4.5	0.0	chr2	897810	898216	(241295313)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	1911695
1248	20.9	14.0	9.8	chr2	898218	898674	(241294855)	C	MER66D	LTR/ERV1	(5)	479	1	1911696
453	26.1	7.0	5.7	chr2	1263763	1263941	(240929588)	C	MIRb	SINE/MIR	(86)	182	5	1912048
3642	18.5	12.0	14.2	chr2	1263970	1265064	(240928465)	+	Tigger2b_Pri	DNA/TcMar-Tigger	1	1067	(1)	1912049
254	29.5	6.7	3.5	chr2	2700717	2700832	(239492697)	+	MIR3	SINE/MIR	62	181	(27)	1913569
349	33.8	2.5	1.3	chr2	3107381	3107536	(239085993)	C	L4_A_Mam	LINE/RTE-X	(702)	4288	4131	1914075
1396	26.1	13.7	6.7	chr2	4205639	4206041	(237987488)	+	MLT1F1	LTR/ERVL-MaLR	1	447	(122)	1915448
2748	16.8	1.0	1.2	chr2	4206042	4206528	(237987001)	C	MER66B	LTR/ERV1	(0)	486	1	1915449
32544	20.9	1.9	1.6	chr2	6838364	6846789	(235346740)	C	HUERS-P3-int	LTR/ERV1	(224)	8695	262	1919104
31	2.8	2.7	0.0	chr2	9556318	9556354	(232637175)	+	(CCCCGAG)n	Simple_repeat	1	38	(0)	1923168
901	13.7	0.0	0.0	chr2	10121650	10121788	(232071741)	C	FLAM_C	SINE/Alu	(4)	139	1	1924225
2855	14.7	2.1	2.9	chr2	10211915	10212403	(231981126)	+	MER66B	LTR/ERV1	2	486	(0)	1924397
1775	23.5	9.4	0.8	chr2	10212404	10212674	(231980855)	+	L1ME3A	LINE/L1	5544	5851	(322)	1924388
3227	15.1	1.0	0.2	chr2	10389000	10389478	(231804051)	+	MER66B	LTR/ERV1	1	483	(3)	1924681
1001	23.0	11.1	4.2	chr2	10389479	10389634	(231803895)	+	MLT1A	LTR/ERVL-MaLR	214	362	(12)	1924680
720	31.2	5.3	0.9	chr2	10389640	10389978	(231803551)	C	L1ME3A	LINE/L1	(261)	5912	5558	1924682
4535	25.1	3.0	2.0	chr2	12859562	12860256	(229333273)	+	MLT1F2-int	LTR/ERVL-MaLR	1	694	(795)	1928990
3215	14.6	0.0	0.0	chr2	12860257	12860742	(229332787)	C	MER66B	LTR/ERV1	(0)	486	1	1928992
2294	19.5	10.9	1.6	chr2	14459828	14460318	(227733211)	+	MER66C	LTR/ERV1	1	542	(13)	1931215
295	28.4	1.0	11.2	chr2	18422844	18422950	(223770579)	C	L2c	LINE/L2	(20)	3367	3272	1937437
238	23.9	3.3	8.3	chr2	18422955	18423050	(223770479)	C	L2a	LINE/L2	(0)	3426	3336	1937438
2232	17.0	0.5	1.5	chr2	18423398	18423791	(223769738)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1937439
2741	13.6	4.5	2.5	chr2	19825096	19825571	(222367958)	+	MER66B	LTR/ERV1	1	486	(0)	1939348
11140	11.1	2.4	0.3	chr2	19825572	19825720	(222367809)	C	Tigger1	DNA/TcMar-Tigger	(1461)	957	797	1939347
294	33.3	1.0	2.9	chr2	22489995	22490099	(219703430)	+	MIRb	SINE/MIR	45	147	(121)	1943127
2088	17.3	8.9	1.9	chr2	22490101	22490518	(219703011)	C	MER66A	LTR/ERV1	(0)	478	29	1943128
625	24.0	11.0	9.6	chr2	25559611	25559933	(216633596)	+	MLT1D	LTR/ERVL-MaLR	2	329	(176)	1948136
2203	10.9	2.0	1.3	chr2	25559963	25560266	(216633263)	+	AluSx	SINE/Alu	1	306	(6)	1948137
779	12.4	4.4	5.0	chr2	27854759	27854919	(214338610)	C	L1MA10	LINE/L1	(0)	6334	6175	1952628
685	14.3	0.0	0.8	chr2	27854927	27855046	(214338483)	+	L1MB1	LINE/L1	6042	6160	(8)	1952629
1384	22.0	11.1	8.1	chr2	27855047	27855145	(214338384)	+	MER66C	LTR/ERV1	428	512	(43)	1952627
322	28.1	11.8	5.6	chr2	28249953	28250306	(213943223)	C	L2b	LINE/L2	(119)	3307	2955	1953242
852	18.9	6.7	3.6	chr2	28250334	28250580	(213942949)	C	L1M4a1	LINE/L1	(265)	2314	2060	1953243
16	17.3	2.6	0.0	chr2	28567187	28567225	(213626304)	+	A-rich	Low_complexity	1	40	(0)	1953788
2393	6.8	0.0	0.7	chr2	28567461	28567752	(213625777)	C	AluSc5	SINE/Alu	(0)	309	20	1953789
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
496	21.0	11.2	9.0	chr2	33226183	33226349	(208967180)	C	L1MEf	LINE/L1	(3839)	2301	2144	1961625
2447	17.2	0.4	11.4	chr2	33226350	33226893	(208966636)	C	MER66D	LTR/ERV1	(0)	484	1	1961629
1887	23.0	3.4	7.0	chr2	34426095	34426647	(207766882)	C	MER41B	LTR/ERV1	(36)	598	1	1963552
1762	18.7	2.7	3.4	chr2	34915270	34915764	(207277765)	+	MER66C	LTR/ERV1	1	528	(27)	1964189
1442	22.5	3.3	0.2	chr2	34915836	34916150	(207277379)	C	L1MB5	LINE/L1	(74)	6100	5778	1964190
31	0.0	0.0	0.0	chr2	37156911	37156939	(205036590)	+	(CGC)n	Simple_repeat	1	29	(0)	1967231
12	26.7	4.1	0.0	chr2	37157099	37157147	(205036382)	+	(GGCG)n	Simple_repeat	1	51	(0)	1967232
11	25.7	0.0	7.8	chr2	37924965	37925028	(204268501)	+	G-rich	Low_complexity	1	64	(0)	1968476
276	28.1	11.4	9.6	chr2	39123658	39123765	(203069764)	+	L2a	LINE/L2	3328	3425	(1)	1970601
247	22.4	3.3	0.0	chr2	39123868	39123925	(203069604)	+	L3	LINE/CR1	4035	4094	(5)	1970600
456	21.1	6.7	0.4	chr2	41840508	41840651	(200352878)	C	MIR	SINE/MIR	(15)	247	103	1974501
245	25.6	11.0	0.8	chr2	42809687	42809808	(199383721)	C	Charlie8	DNA/hAT-Charlie	(2256)	172	37	1976360
28	0.0	3.3	0.0	chr2	42810107	42810136	(199383393)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1976361
2803	14.0	7.0	1.1	chr2	45328126	45328580	(196864949)	C	MER66D	LTR/ERV1	(0)	484	1	1980558
292	32.0	4.7	6.7	chr2	46507562	46507799	(195685730)	+	LTR103b_Mam	LTR/ERV1?	242	474	(74)	1982367
205	33.9	4.1	5.2	chr2	46508189	46508362	(195685167)	+	L2b	LINE/L2	2700	2871	(548)	1982368
16	18.9	0.0	0.0	chr2	47344983	47345018	(194848511)	+	A-rich	Low_complexity	1	36	(0)	1983862
2475	6.0	0.0	0.0	chr2	47646117	47646398	(194547131)	+	AluY	SINE/Alu	1	282	(29)	1984464
28	2.5	2.3	4.4	chr2	47646399	47646442	(194547087)	+	(AAAT)n	Simple_repeat	1	45	(0)	1984465
1053	21.3	9.9	3.1	chr2	47646443	47646571	(194546958)	+	MSTD	LTR/ERVL-MaLR	162	312	(84)	1984462
363	26.1	0.0	1.1	chr2	47646607	47646695	(194546834)	C	L2a	LINE/L2	(3)	3423	3336	1984466
2304	13.1	0.3	0.0	chr2	47646696	47647007	(194546522)	C	AluSq2	SINE/Alu	(0)	313	1	1984467
281	32.9	11.3	0.0	chr2	48194797	48195070	(193998459)	+	L2	LINE/L2	2643	2951	(468)	1985540
211	17.1	0.0	0.0	chr2	54331167	54331201	(187862328)	C	MIRb	SINE/MIR	(12)	256	222	1994183
892	25.7	16.4	1.0	chr2	54331220	54331605	(187861924)	+	L2a	LINE/L2	2548	3004	(415)	1994184
393	29.4	10.9	7.5	chr2	55112221	55112459	(187081070)	C	MIRb	SINE/MIR	(0)	268	21	1995315
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
2175	7.0	7.1	0.0	chr2	55519117	55519403	(186674126)	C	AluSx	SINE/Alu	(0)	312	4	1996064
810	27.6	0.5	0.0	chr2	56531609	56531800	(185661729)	+	L1MC5	LINE/L1	6701	6893	(1149)	1997526
1889	12.0	0.7	0.0	chr2	56531801	56532067	(185661462)	C	MER66C	LTR/ERV1	(14)	541	273	1997528
666	27.7	0.0	1.3	chr2	56532065	56532221	(185661308)	C	MLT1D	LTR/ERVL-MaLR	(105)	400	246	1997529
20	21.7	2.3	7.4	chr2	60116107	60116200	(182077329)	+	A-rich	Low_complexity	1	89	(0)	2001993
1170	13.3	1.9	0.9	chr2	60116244	60116456	(182077073)	C	MER66C	LTR/ERV1	(19)	536	322	2001994
16	13.1	0.0	0.0	chr2	60116462	60116486	(182077043)	+	(T)n	Simple_repeat	1	25	(0)	2001995
2501	8.0	1.1	3.6	chr2	60116494	60116857	(182076672)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	2001996
588	28.9	11.5	2.8	chr2	64917502	64917715	(177275814)	+	MIRb	SINE/MIR	28	268	(0)	2010187
12	20.8	3.6	5.3	chr2	64918187	64918241	(177275288)	+	G-rich	Low_complexity	1	57	(0)	2010188
1926	14.4	0.7	0.3	chr2	64918275	64918558	(177274971)	C	AluJb	SINE/Alu	(26)	286	2	2010189
23	19.1	0.0	0.0	chr2	65129922	65129969	(177063560)	+	(GCC)n	Simple_repeat	1	48	(0)	2010632
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
16	5.3	0.0	0.0	chr2	66070944	66070963	(176122566)	+	(T)n	Simple_repeat	1	20	(0)	2012321
1288	27.0	9.4	1.8	chr2	69264743	69265142	(172928387)	+	LTR16	LTR/ERVL	5	438	(0)	2016749
2153	19.2	8.8	1.1	chr2	69265211	69265658	(172927871)	C	MER66B	LTR/ERV1	(0)	486	1	2016753
12	17.6	3.1	0.0	chr2	70767439	70767470	(171426059)	+	(CGCCC)n	Simple_repeat	1	33	(0)	2019581
21	28.1	3.4	1.1	chr2	70767477	70767490	(171426039)	+	(GAGGC)n	Simple_repeat	1	26	(65)	2019582
22	10.5	2.3	2.2	chr2	70767491	70767534	(171425995)	+	G-rich	Low_complexity	1	45	(0)	2019583
21	28.1	3.4	1.1	chr2	70767535	70767565	(171425964)	+	(GAGGC)n	Simple_repeat	27	91	(0)	2019582
11	13.0	8.8	0.0	chr2	73070665	73070698	(169122831)	+	(GCGCTCC)n	Simple_repeat	1	37	(0)	2023053
361	34.2	5.2	0.5	chr2	73272123	73272325	(168921204)	+	MLT1K-int	LTR/ERVL-MaLR	130	342	(1045)	2023426
184	28.6	14.4	0.8	chr2	73737577	73737696	(168455833)	+	MIR3	SINE/MIR	30	168	(40)	2024107
2072	8.9	0.4	0.0	chr2	73737719	73737987	(168455542)	C	AluY	SINE/Alu	(16)	295	26	2024108
307	4.8	0.0	0.0	chr2	77353695	77353736	(164839793)	C	L1PA3	LINE/L1	(5)	6150	6109	2029534
2387	18.1	2.8	2.0	chr2	77353803	77354259	(164839270)	C	MER66A	LTR/ERV1	(0)	478	18	2029535
5160	17.4	2.6	3.1	chr2	77580662	77580927	(164612602)	C	L1MA9	LINE/L1	(0)	6312	6053	2029850
2576	18.8	1.1	0.6	chr2	77580928	77581403	(164612126)	C	MER66A	LTR/ERV1	(0)	478	1	2029851
4640	5.7	0.7	0.0	chr2	77807603	77808185	(164385344)	+	LTR14C	LTR/ERVK	1	587	(0)	2030133
5158	7.8	4.2	2.5	chr2	77808186	77808360	(164385169)	+	MER4E	LTR/ERV1	603	766	(0)	2030132
1205	33.5	6.8	2.3	chr2	77808367	77808494	(164385035)	C	L1M4	LINE/L1	(1794)	4352	4224	2030131
1075	19.3	9.6	3.1	chr2	77863979	77864503	(164329026)	+	MER34C2	LTR/ERV1	1	516	(79)	2030205
763	14.5	6.7	4.1	chr2	77864539	77864683	(164328846)	C	AluJo	SINE/Alu	(16)	296	148	2030206
335	19.0	4.8	6.0	chr2	77864695	77864778	(164328751)	+	LTR48	LTR/ERV1	703	785	(2)	2030207
2816	1.9	0.0	1.3	chr2	77864795	77865105	(164328424)	+	AluYi6	SINE/Alu	1	307	(4)	2030208
2191	18.8	6.0	2.8	chr2	83147187	83147656	(159045873)	+	MER66B	LTR/ERV1	1	486	(0)	2037264
14	16.8	3.9	5.6	chr2	84970686	84970737	(157222792)	+	(GGCCCA)n	Simple_repeat	1	54	(0)	2039809
13	25.9	3.2	3.1	chr2	84970747	84970809	(157222720)	+	G-rich	Low_complexity	1	65	(0)	2039810
2718	13.4	3.3	6.9	chr2	88248279	88248783	(153944746)	C	MER66B	LTR/ERV1	(0)	486	1	2045564
342	26.6	14.2	3.4	chr2	88755829	88756034	(153437495)	+	L2b	LINE/L2	3127	3358	(17)	2046576
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
290	31.1	9.0	0.9	chr2	94981848	94982061	(147211468)	C	L2b	LINE/L2	(17)	3358	3126	2050014
769	25.9	10.8	0.3	chr2	96509110	96509400	(145684129)	+	L1ME3	LINE/L1	5772	6096	(66)	2052259
2657	13.4	8.0	3.2	chr2	96566623	96567084	(145626445)	+	MER66B	LTR/ERV1	1	486	(0)	2052362
12498	17.3	10.1	7.2	chr2	96567085	96567107	(145626422)	+	MER92-int	LTR/ERV1	2346	2364	(2854)	2052360
2242	11.8	0.0	0.0	chr2	96567108	96567404	(145626125)	C	AluSx4	SINE/Alu	(13)	297	1	2052363
13349	16.5	4.3	1.5	chr2	98261925	98264927	(143928602)	C	L1M3c	LINE/L1	(654)	5581	2482	2054773
2615	13.0	8.9	3.9	chr2	101599827	101600284	(140593245)	+	MER66D	LTR/ERV1	1	483	(1)	2059876
567	17.4	15.3	3.5	chr2	101600285	101600345	(140593184)	+	Tigger4a	DNA/TcMar-Tigger	99	163	(73)	2059875
2239	10.4	0.0	0.0	chr2	101600352	101600638	(140592891)	+	AluSp	SINE/Alu	1	287	(26)	2059877
2364	21.1	2.2	0.4	chr2	103579995	103580445	(138613084)	+	MER66B	LTR/ERV1	28	486	(0)	2062483
2544	21.9	5.6	3.7	chr2	103580446	103581335	(138612194)	C	L1MB7	LINE/L1	(3805)	2839	1857	2062482
2962	15.2	0.2	0.4	chr2	107514416	107514876	(134678653)	+	MER66B	LTR/ERV1	27	486	(0)	2067975
1006	20.0	6.0	7.6	chr2	107514878	107514977	(134678552)	C	L1ME2z	LINE/L1	(429)	6015	5918	2067974
4850	14.7	3.5	1.5	chr2	107514978	107515760	(134677769)	C	LTR1A1	LTR/ERV1	(0)	799	1	2067976
301	26.9	10.3	0.0	chr2	108883782	108883885	(133309644)	+	LTR33	LTR/ERVL	396	511	(4)	2069964
3124	14.7	0.2	0.0	chr2	111668048	111668523	(130525006)	+	MER66A	LTR/ERV1	1	477	(1)	2073841
40	2.6	0.0	0.0	chr2	111668644	111668682	(130524847)	+	(GT)n	Simple_repeat	1	39	(0)	2073842
1288	19.6	15.6	2.8	chr2	111668683	111669076	(130524453)	C	MLT2B1	LTR/ERVL	(64)	456	3	2073843
2276	16.8	3.1	3.1	chr2	114199400	114199755	(127993774)	+	MER68	LTR/ERVL	7	366	(197)	2078065
2967	16.4	0.8	0.4	chr2	114199756	114200239	(127993290)	C	MER66B	LTR/ERV1	(0)	486	1	2078066
889	29.5	3.7	8.4	chr2	121135831	121136054	(121057475)	+	MLT1A0	LTR/ERVL-MaLR	1	209	(199)	2088134
2613	16.2	1.0	8.2	chr2	121136055	121136577	(121056952)	C	MER66B	LTR/ERV1	(0)	486	2	2088135
230	20.9	0.0	0.0	chr2	126657383	126657433	(115536096)	+	MIRc	SINE/MIR	109	157	(51)	2096195
14	19.7	2.3	2.3	chr2	127064658	127064700	(115128829)	+	(GAGCAGG)n	Simple_repeat	1	44	(0)	2096829
31	21.5	0.0	0.0	chr2	127387386	127387447	(114806082)	+	(AC)n	Simple_repeat	1	62	(0)	2097356
15	19.3	4.1	2.0	chr2	127387975	127388023	(114805506)	+	(CGTCGCG)n	Simple_repeat	1	51	(0)	2097357
23	15.5	3.9	0.0	chr2	127388158	127388208	(114805321)	+	(CCCGGC)n	Simple_repeat	1	53	(0)	2097358
1982	15.7	6.6	4.7	chr2	127857370	127857798	(114335731)	+	MER67A	LTR/ERV1	106	543	(0)	2098143
19	17.5	3.6	3.5	chr2	127858082	127858137	(114335392)	+	(CGC)n	Simple_repeat	1	58	(0)	2098144
29	18.9	1.1	5.7	chr2	128027619	128027705	(114165824)	+	(CCGC)n	Simple_repeat	1	88	(0)	2098508
556	32.5	2.0	0.5	chr2	129376100	129376300	(112817229)	+	MIRb	SINE/MIR	23	226	(42)	2100383
13	11.1	3.2	3.1	chr2	135876443	135876473	(106317056)	+	(CGC)n	Simple_repeat	1	32	(0)	2109773
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
263	29.9	4.1	0.0	chr2	136118498	136118614	(106074915)	C	MIR3	SINE/MIR	(70)	138	17	2110185
443	33.3	12.6	1.1	chr2	138420247	138420451	(103773078)	+	Zaphod	DNA/hAT-Tip100	87	324	(3707)	2113400
720	16.4	11.7	6.9	chr2	138420457	138420740	(103772789)	+	MSTD	LTR/ERVL-MaLR	1	367	(29)	2113402
797	22.2	1.2	5.5	chr2	138420709	138420961	(103772568)	+	Zaphod	DNA/hAT-Tip100	3790	4031	(0)	2113403
8054	21.0	2.1	0.7	chr2	142397691	142399317	(99794212)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	2118748
19	14.5	0.0	0.0	chr2	144461081	144461111	(97732418)	+	(T)n	Simple_repeat	1	31	(0)	2121440
2687	18.4	1.9	0.2	chr2	150299832	150300309	(91893220)	+	MER66B	LTR/ERV1	1	486	(0)	2129172
3183	27.4	10.1	3.2	chr2	150300310	150303469	(91890060)	C	L1ME3	LINE/L1	(1245)	4901	1438	2129171
31	0.0	0.0	0.0	chr2	156342363	156342391	(85851138)	+	(CCCCCGG)n	Simple_repeat	1	29	(0)	2137294
21	4.2	0.0	0.0	chr2	159712088	159712112	(82481417)	+	(A)n	Simple_repeat	1	25	(0)	2142018
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
1805	11.0	6.2	0.0	chr2	161279685	161279974	(80913555)	+	L1PA10	LINE/L1	5860	6168	(0)	2144206
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
30	29.4	0.9	0.9	chr2	162838754	162838858	(79354671)	+	G-rich	Low_complexity	1	106	(0)	2146179
66	0.0	0.0	0.0	chr2	162839063	162839118	(79354411)	+	(AC)n	Simple_repeat	1	56	(0)	2146180
36	0.0	0.0	0.0	chr2	165953652	165953685	(76239844)	+	(CCCGCTCA)n	Simple_repeat	1	34	(0)	2150388
1805	20.0	7.6	1.6	chr2	171631165	171631606	(70561923)	+	LTR76	LTR/ERV1	205	675	(0)	2158788
1565	16.8	10.7	5.5	chr2	171631607	171631677	(70561852)	+	MER4CL34	LTR/ERV1	350	429	(336)	2158787
16	4.3	0.0	3.9	chr2	172102296	172102321	(70091208)	+	(GCC)n	Simple_repeat	1	26	(0)	2159593
18	32.1	1.3	1.2	chr2	172102401	172102479	(70091050)	+	(GCT)n	Simple_repeat	1	80	(0)	2159594
286	21.7	6.7	4.6	chr2	174487547	174487633	(67705896)	+	MIR	SINE/MIR	5	93	(169)	2163350
26	24.9	0.0	4.5	chr2	179264569	179264659	(62928870)	+	(GGC)n	Simple_repeat	1	86	(0)	2169919
14	12.6	0.0	7.5	chr2	179264814	179264853	(62928676)	+	G-rich	Low_complexity	1	40	(0)	2169920
227	25.7	12.8	1.8	chr2	179264958	179265068	(62928461)	+	MIRc	SINE/MIR	2	126	(142)	2169921
2219	16.0	6.1	3.8	chr2	186704968	186705416	(55488113)	C	MER66B	LTR/ERV1	(0)	486	27	2179464
1364	11.7	24.4	0.0	chr2	187715425	187715653	(54477876)	+	MER66C	LTR/ERV1	8	292	(263)	2180708
924	14.0	0.0	0.7	chr2	187715655	187715791	(54477738)	+	MER66C	LTR/ERV1	406	541	(14)	2180708
232	35.8	14.9	2.3	chr2	189661901	189662203	(52531326)	+	L2	LINE/L2	2485	2832	(587)	2183174
14	14.2	3.2	0.0	chr2	190343878	190343908	(51849621)	+	(CCT)n	Simple_repeat	1	32	(0)	2184207
11	24.0	4.5	0.0	chr2	190344130	190344173	(51849356)	+	(GGCCCC)n	Simple_repeat	1	46	(0)	2184208
29	31.9	0.0	1.1	chr2	193183103	193183190	(49010339)	+	(AT)n	Simple_repeat	1	88	(0)	2188126
2250	15.7	4.1	8.1	chr2	193183229	193183733	(49009796)	C	MER66D	LTR/ERV1	(0)	484	1	2188127
23	21.9	0.0	0.0	chr2	196926620	196926672	(45266857)	+	(GCC)n	Simple_repeat	1	53	(0)	2193088
13	15.0	9.1	3.3	chr2	196926746	196926800	(45266729)	+	(GCGCCT)n	Simple_repeat	1	60	(0)	2193089
11822	11.7	1.6	1.6	chr2	197830079	197832947	(44360582)	+	L1PA7	LINE/L1	1060	3958	(2196)	2194652
9747	11.4	3.7	5.3	chr2	198156854	198158461	(44035068)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2195120
378	27.1	0.9	3.6	chr2	199613550	199613660	(42579869)	+	L2a	LINE/L2	3313	3420	(6)	2197100
603	25.2	13.6	4.1	chr2	199613737	199613955	(42579574)	C	ERV3-16A3_I-int	LTR/ERVL	(1400)	3826	3584	2197101
4939	30.5	6.7	6.1	chr2	199614031	199614928	(42578601)	C	ERV3-16A3_I-int	LTR/ERVL	(1945)	3281	2377	2197101
2175	15.5	5.1	2.6	chr2	200836219	200836552	(41356977)	C	MLT1A0-int	LTR/ERVL-MaLR	(1339)	396	53	2198944
2179	14.2	0.0	0.0	chr2	200836553	200836863	(41356666)	C	AluSx1	SINE/Alu	(1)	311	1	2198949
2175	15.5	5.1	2.6	chr2	200836864	200836913	(41356616)	C	MLT1A0-int	LTR/ERVL-MaLR	(1683)	52	2	2198944
1291	25.8	3.3	4.3	chr2	200836915	200837199	(41356330)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	86	2198944
3233	15.9	0.2	0.4	chr2	201816700	201817186	(40376343)	+	MER66B	LTR/ERV1	1	486	(0)	2200643
4974	12.0	2.1	3.8	chr2	201817187	201817425	(40376104)	C	L1PA17	LINE/L1	(570)	5596	5359	2200642
662	16.7	4.8	0.8	chr2	202994477	202994596	(39198933)	C	AluJr	SINE/Alu	(179)	133	9	2203090
253	26.6	11.4	0.9	chr2	202994636	202994745	(39198784)	C	L1ME1	LINE/L1	(1053)	5093	4971	2203075
1458	16.0	36.5	0.0	chr2	202994748	202995079	(39198450)	C	MER66A	LTR/ERV1	(3)	483	27	2203091
1906	12.8	4.5	0.3	chr2	203238449	203238566	(38954963)	C	AluJb	SINE/Alu	(193)	119	2	2203558
552	20.3	1.1	18.4	chr2	203238567	203238642	(38954887)	C	MER5A	DNA/hAT-Charlie	(112)	77	4	2203557
190	30.2	1.1	7.5	chr2	204544937	204545029	(37648500)	+	MIR3	SINE/MIR	120	206	(2)	2205784
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
29	7.2	2.3	0.0	chr2	204545612	204545655	(37647874)	+	(GCCAGG)n	Simple_repeat	1	45	(0)	2205786
326	23.5	13.1	4.0	chr2	204545685	204545808	(37647721)	C	L1MDb	LINE/L1	(5718)	691	555	2205787
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
2613	15.7	3.3	0.9	chr2	208425273	208425716	(33767813)	+	MER66B	LTR/ERV1	27	481	(5)	2211843
1273	23.3	3.7	3.4	chr2	208425720	208426043	(33767486)	C	L1MDa	LINE/L1	(6288)	345	21	2211840
2842	16.5	0.2	1.8	chr2	208999397	208999890	(33193639)	+	MER66B	LTR/ERV1	1	486	(0)	2212497
16	24.7	7.2	1.4	chr2	216109701	216109769	(26083760)	+	(TC)n	Simple_repeat	1	74	(0)	2222200
12	12.4	5.1	4.9	chr2	218010374	218010412	(24183117)	+	(GCGGC)n	Simple_repeat	1	41	(0)	2225327
16	21.4	4.7	3.0	chr2	218010587	218010650	(24182879)	+	G-rich	Low_complexity	1	67	(0)	2225328
12	19.7	0.0	0.0	chr2	218323319	218323347	(23870182)	+	(CTC)n	Simple_repeat	1	29	(0)	2225871
17	17.8	2.7	7.9	chr2	218323456	218323529	(23870000)	+	G-rich	Low_complexity	1	76	(0)	2225872
1984	12.5	13.3	1.4	chr2	218763582	218763939	(23429590)	C	MLT1A1	LTR/ERVL-MaLR	(1)	407	1	2226764
1114	21.9	13.5	7.0	chr2	218763940	218764128	(23429401)	C	L1ME3A	LINE/L1	(214)	5959	5751	2226762
301	29.7	15.9	1.9	chr2	219598518	219598733	(22594796)	+	MIRb	SINE/MIR	17	268	(0)	2228197
2472	15.8	5.5	1.7	chr2	222404026	222404480	(19789049)	+	MLT2B4	LTR/ERVL	82	556	(0)	2232543
1166	29.4	5.4	0.7	chr2	222404483	222404886	(19788643)	C	LTR33B	LTR/ERVL	(36)	467	44	2232545
422	23.3	9.7	0.0	chr2	222724164	222724232	(19469297)	+	MER81	DNA/hAT-Blackjack	1	80	(34)	2233055
2036	16.5	9.7	13.6	chr2	222724233	222724738	(19468791)	C	MER66D	LTR/ERV1	(0)	484	1	2233056
1026	16.9	4.7	1.0	chr2	224646357	224646559	(17546970)	+	MER20	DNA/hAT-Charlie	2	212	(7)	2236292
22	3.0	2.8	2.7	chr2	226792122	226792157	(15401372)	+	(TCTTTT)n	Simple_repeat	1	37	(0)	2239461
381	27.0	10.4	6.4	chr2	230712235	230712422	(11481107)	C	MIR	SINE/MIR	(30)	232	38	2245574
43	0.0	0.0	0.0	chr2	230987475	230987513	(11206016)	+	(CAGGGC)n	Simple_repeat	1	39	(0)	2246024
261	23.9	1.4	2.7	chr2	231037207	231037279	(11156250)	+	L2b	LINE/L2	3303	3374	(1)	2246120
2596	6.5	0.0	0.0	chr2	231565199	231565504	(10628025)	+	AluY	SINE/Alu	1	306	(5)	2247152
3079	15.9	0.2	3.8	chr2	231565505	231565737	(10627792)	C	MER66B	LTR/ERV1	(27)	459	231	2247151
2292	11.4	0.0	0.0	chr2	231565738	231566036	(10627493)	+	AluSc	SINE/Alu	1	299	(10)	2247153
363	20.9	3.2	0.0	chr2	231832547	231832635	(10360894)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
331	23.9	2.1	0.0	chr2	231832636	231832725	(10360804)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
360	23.2	2.0	2.0	chr2	231832753	231832853	(10360676)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247713
369	20.9	3.2	0.0	chr2	231832854	231832942	(10360587)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
237	28.7	14.4	0.0	chr2	231925179	231925279	(10268250)	+	MIR	SINE/MIR	35	152	(110)	2247911
263	32.1	9.3	6.6	chr2	231961034	231961334	(10232195)	+	L2c	LINE/L2	3034	3386	(1)	2247971
1192	23.8	13.0	0.5	chr2	234730135	234730523	(7463006)	+	MLT1H	LTR/ERVL-MaLR	102	546	(3)	2252438
2607	17.0	1.1	1.1	chr2	238823628	238824079	(3369450)	+	MER66A	LTR/ERV1	27	478	(0)	2258276
399	33.6	0.9	0.0	chr2	238824086	238824198	(3369331)	+	L1ME1	LINE/L1	337	450	(5973)	2258274
32	20.4	2.5	6.4	chr2	241610789	241610910	(582619)	+	(GGACAG)n	Simple_repeat	1	125	(0)	2261426
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
188	27.6	4.9	1.7	chr20	645387	645445	(63798722)	C	L2c	LINE/L2	(210)	3177	3117	2263415
198	30.3	7.8	2.2	chr20	645944	646061	(63798106)	C	MIR3	SINE/MIR	(72)	190	60	2263416
2229	3.4	0.0	4.4	chr20	727636	727930	(63716237)	C	AluSp	SINE/Alu	(30)	283	2	2263617
13	27.3	3.4	1.6	chr20	728423	728481	(63715686)	+	(GGCGC)n	Simple_repeat	1	61	(0)	2263618
353	20.1	4.5	1.2	chr20	1199719	1199823	(63244344)	C	MIR3	SINE/MIR	(89)	119	15	2264600
203	33.2	21.1	0.0	chr20	1199830	1200016	(63244151)	C	L3	LINE/CR1	(13)	4086	3850	2264601
2196	15.2	2.5	19.0	chr20	1200055	1200637	(63243530)	C	MER66D	LTR/ERV1	(0)	484	1	2264602
244	31.4	0.0	9.5	chr20	2195475	2195590	(62248577)	+	MER5A	DNA/hAT-Charlie	63	167	(22)	2266463
313	31.9	14.6	0.7	chr20	2415575	2415874	(62028293)	C	L2	LINE/L2	(718)	2701	2353	2266920
367	29.9	4.4	3.0	chr20	2415895	2416051	(62028116)	C	MER102b	DNA/hAT-Charlie	(0)	341	166	2266921
1024	16.2	2.3	0.0	chr20	2416045	2416211	(62027956)	C	MER66A	LTR/ERV1	(30)	456	286	2266922
277	17.3	0.0	1.9	chr20	2416202	2416253	(62027914)	+	AluJo	SINE/Alu	252	302	(10)	2266923
907	15.8	0.0	2.0	chr20	2599592	2599740	(61844427)	C	AluJb	SINE/Alu	(165)	147	2	2267257
16	5.3	0.0	0.0	chr20	6167834	6167853	(58276314)	+	(TA)n	Simple_repeat	1	20	(0)	2273990
491	22.6	0.7	5.8	chr20	6167859	6168013	(58276154)	C	L1ME3A	LINE/L1	(21)	6152	6006	2273991
3076	14.0	5.0	0.2	chr20	6168014	6168528	(58275639)	C	MER66C	LTR/ERV1	(14)	541	1	2273992
327	34.6	13.6	3.9	chr20	6679875	6680356	(57763811)	+	L2a	LINE/L2	2825	3421	(5)	2274785
2286	18.0	4.9	1.7	chr20	8650202	8650671	(55793496)	+	MER66B	LTR/ERV1	1	486	(0)	2277602
425	21.7	8.6	3.5	chr20	8650672	8650706	(55793461)	+	Charlie7	DNA/hAT-Charlie	691	721	(1891)	2277601
358	19.3	6.7	3.2	chr20	8650700	8650876	(55793291)	+	Charlie7a	DNA/hAT-Charlie	180	264	(8)	2277603
13	26.5	1.6	4.6	chr20	10219528	10219591	(54224576)	+	G-rich	Low_complexity	1	65	(0)	2280188
18	19.5	2.7	6.7	chr20	10219592	10219597	(54224570)	+	(GCGG)n	Simple_repeat	4	75	(0)	2280189
235	36.1	0.0	0.0	chr20	16581189	16581271	(47862896)	C	MIRb	SINE/MIR	(163)	105	23	2289570
2655	13.5	9.9	0.0	chr20	16581416	16581853	(47862314)	C	MER66B	LTR/ERV1	(0)	486	1	2289571
1927	15.9	0.0	1.7	chr20	16659339	16659639	(47784528)	C	AluJo	SINE/Alu	(16)	296	1	2289724
2460	17.8	2.3	6.2	chr20	16659739	16660242	(47783925)	C	MER66D	LTR/ERV1	(0)	484	1	2289725
3383	14.3	0.4	0.0	chr20	16744209	16744747	(47699420)	C	MER66C	LTR/ERV1	(14)	541	1	2289873
1886	15.6	1.9	28.2	chr20	17910863	17911451	(46532716)	+	MER66D	LTR/ERV1	63	484	(0)	2291734
686	30.8	11.2	1.9	chr20	17911452	17911703	(46532464)	+	L2a	LINE/L2	3141	3425	(1)	2291733
266	23.5	0.0	2.9	chr20	18496642	18496711	(45947456)	+	L1ME3F	LINE/L1	6158	6225	(18)	2292770
618	26.6	3.9	9.1	chr20	18793954	18794451	(45649716)	+	MLT2F	LTR/ERVL	5	663	(0)	2293236
554	33.2	6.9	0.0	chr20	19523626	19523827	(44920340)	+	MIRb	SINE/MIR	27	243	(25)	2294245
948	31.7	8.2	1.2	chr20	19523848	19524253	(44919914)	+	LTR16C	LTR/ERVL	36	472	(17)	2294246
684	31.4	7.3	3.0	chr20	20768043	20768265	(43675902)	+	L2a	LINE/L2	3001	3239	(187)	2296044
9356	11.6	2.2	13.5	chr20	20768266	20770047	(43674120)	+	LTR12C	LTR/ERV1	3	1579	(0)	2296045
977	27.1	3.8	3.8	chr20	21059723	21060027	(43384140)	C	L1ME3A	LINE/L1	(70)	6103	5798	2296534
655	23.9	6.0	0.0	chr20	21060054	21060241	(43383926)	C	L1ME3Cz	LINE/L1	(344)	5818	5619	2296536
2043	18.3	2.3	10.2	chr20	21060242	21060364	(43383803)	C	MER66B	LTR/ERV1	(0)	486	365	2296537
3475	5.8	7.1	0.0	chr20	21060365	21060793	(43383374)	C	LTR7B	LTR/ERV1	(2)	462	1	2296538
2761	20.2	0.2	0.4	chr20	23015175	23015661	(41428506)	C	MER66B	LTR/ERV1	(0)	486	1	2299128
2069	19.3	8.4	5.3	chr20	24094654	24095317	(40348850)	C	LTR26E	LTR/ERV1	(0)	622	1	2300482
13	8.1	0.0	6.7	chr20	24095603	24095632	(40348535)	+	(TTTTA)n	Simple_repeat	1	30	(0)	2300483
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
306	36.1	11.6	4.7	chr20	29883098	29883457	(34560710)	+	L1M5	LINE/L1	4758	5145	(1001)	2304630
13	24.0	0.0	0.0	chr20	29883588	29883622	(34560545)	+	(TAT)n	Simple_repeat	1	35	(0)	2304631
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
24	25.8	0.0	2.6	chr20	30290568	30290644	(34153523)	+	G-rich	Low_complexity	1	77	(0)	2304833
15	14.4	0.0	0.0	chr20	30290858	30290881	(34153286)	+	(T)n	Simple_repeat	1	24	(0)	2304834
407	17.1	0.0	0.0	chr20	30290886	30290955	(34153212)	+	MER53	DNA/hAT	124	193	(0)	2304835
16	20.9	0.0	0.0	chr20	30377144	30377176	(34066991)	+	(C)n	Simple_repeat	1	33	(0)	2304972
8707	6.1	0.1	0.1	chr20	30943024	30944114	(33500053)	C	L1P1	LINE/L1	(1142)	5004	3914	2305626
200	31.8	1.2	6.6	chr20	31671200	31671290	(32772877)	C	MIR3	SINE/MIR	(85)	123	38	2306586
15	12.2	0.0	0.0	chr20	32031236	32031262	(32412905)	+	(CGA)n	Simple_repeat	1	27	(0)	2307467
185	26.5	0.0	3.9	chr20	32031723	32031773	(32412394)	C	MIR1_Amn	SINE/MIR	(80)	150	102	2307468
281	27.9	3.5	0.7	chr20	33113186	33113326	(31330841)	+	L2	LINE/L2	2619	2763	(656)	2309986
1846	18.1	10.2	9.8	chr20	33113331	33113868	(31330299)	C	MER66C	LTR/ERV1	(14)	541	2	2309987
17	27.1	2.9	1.4	chr20	33674429	33674497	(30769670)	+	(GCCGCC)n	Simple_repeat	1	71	(0)	2311314
311	30.9	11.3	0.0	chr20	33674701	33674826	(30769341)	+	MIR	SINE/MIR	102	243	(19)	2311315
376	31.4	17.3	0.8	chr20	33674895	33675282	(30768885)	+	L2c	LINE/L2	2742	3209	(178)	2311316
2242	9.6	1.4	0.0	chr20	33986358	33986648	(30457519)	+	AluSc5	SINE/Alu	1	295	(14)	2312082
2758	17.3	0.8	3.1	chr20	33986649	33986753	(30457414)	+	MER66A	LTR/ERV1	386	478	(0)	2312081
1608	22.4	6.5	8.0	chr20	33986754	33986853	(30457314)	C	MLT1H2	LTR/ERVL-MaLR	(390)	99	1	2312080
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
48	2.0	2.0	0.0	chr20	35277769	35277819	(29166348)	+	(GGGCTG)n	Simple_repeat	1	52	(0)	2314926
26	0.0	0.0	0.0	chr20	35277856	35277880	(29166287)	+	(GGCTGG)n	Simple_repeat	1	25	(0)	2314927
2134	10.3	0.3	0.3	chr20	35525270	35525561	(28918606)	+	AluSq2	SINE/Alu	1	292	(21)	2315467
882	23.0	1.9	7.3	chr20	35525562	35525639	(28918528)	+	MLT1C	LTR/ERVL-MaLR	176	248	(219)	2315466
1486	12.6	6.2	1.2	chr20	35525640	35525897	(28918270)	C	MER66B	LTR/ERV1	(0)	486	215	2315468
271	22.7	9.3	8.3	chr20	35525894	35525989	(28918178)	C	FLAM_C	SINE/Alu	(57)	76	1	2315469
244	33.8	6.3	4.2	chr20	35525994	35526207	(28917960)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	344	2315470
2829	15.1	2.5	0.4	chr20	36062372	36062843	(28381324)	+	MER66B	LTR/ERV1	1	482	(4)	2316756
299	18.8	1.2	10.1	chr20	36062844	36062879	(28381288)	C	MER113A	DNA/hAT-Charlie	(282)	32	1	2316755
261	31.5	11.0	0.7	chr20	36062881	36063027	(28381140)	+	MIRb	SINE/MIR	26	189	(79)	2316757
350	29.1	10.7	0.6	chr20	36063078	36063236	(28380931)	C	MIRc	SINE/MIR	(11)	257	81	2316758
2150	11.9	1.3	0.3	chr20	36850248	36850549	(27593618)	+	AluSz	SINE/Alu	2	306	(6)	2318615
13	18.8	0.0	0.0	chr20	38473102	38473132	(25971035)	+	(CCCTC)n	Simple_repeat	1	31	(0)	2322241
649	23.9	5.5	2.8	chr20	38473494	38473704	(25970463)	C	MIRb	SINE/MIR	(8)	260	44	2322242
3101	12.1	4.1	0.2	chr20	41691570	41692034	(22752133)	+	MER66D	LTR/ERV1	1	484	(0)	2327918
188	18.5	6.9	0.0	chr20	43668023	43668076	(20776091)	C	MIR	SINE/MIR	(186)	76	19	2331696
2219	11.9	0.3	0.0	chr20	44531252	44531562	(19912605)	+	AluSx	SINE/Alu	1	312	(0)	2333725
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
267	27.3	1.9	5.3	chr20	45833402	45833509	(18610658)	C	MIRc	SINE/MIR	(81)	187	83	2336325
15	16.6	2.3	4.4	chr20	45833754	45833818	(18610349)	+	G-rich	Low_complexity	1	63	(0)	2336326
12	12.2	8.0	5.6	chr20	46057622	46057671	(18386496)	+	G-rich	Low_complexity	1	54	(0)	2336868
3163	14.4	0.2	1.0	chr20	46580723	46581212	(17862955)	+	MER66B	LTR/ERV1	1	486	(0)	2337951
537	25.1	6.7	9.4	chr20	46581281	46581557	(17862610)	+	MLT1M	LTR/ERVL-MaLR	149	417	(255)	2337952
2295	17.4	5.0	5.9	chr20	48411994	48412482	(16031685)	+	MER66D	LTR/ERV1	1	484	(0)	2342042
59	30.6	1.9	0.9	chr20	48412500	48412714	(16031453)	+	(CCTT)n	Simple_repeat	1	219	(0)	2342043
2057	19.6	7.4	1.5	chr20	48534949	48535159	(15909008)	C	MER66B	LTR/ERV1	(2)	484	258	2342300
27	0.0	0.0	0.0	chr20	48535160	48535185	(15908982)	+	(TTTTGT)n	Simple_repeat	1	26	(0)	2342301
2067	11.7	0.4	0.0	chr20	48535186	48535466	(15908701)	C	AluSz6	SINE/Alu	(30)	282	1	2342302
2653	17.2	2.9	2.7	chr20	48548946	48549430	(15894737)	C	MER66B	LTR/ERV1	(0)	486	1	2342325
1489	27.2	5.2	1.7	chr20	48909707	48910185	(15533982)	C	MLT1J	LTR/ERVL-MaLR	(12)	500	4	2343182
1819	17.3	14.4	8.8	chr20	48910235	48910748	(15533419)	C	MER66C	LTR/ERV1	(7)	548	1	2343183
658	23.8	2.5	1.5	chr20	49384870	49385065	(15059102)	+	Charlie8	DNA/hAT-Charlie	70	267	(2161)	2344281
236	18.4	3.8	14.6	chr20	50469991	50470047	(13974120)	+	L1M5	LINE/L1	5556	5613	(511)	2347025
251	8.6	0.0	0.0	chr20	50470098	50470132	(13974035)	C	L2a	LINE/L2	(3)	3423	3389	2347027
331	23.5	6.6	2.3	chr20	50470140	50470226	(13973941)	C	MLT1J2	LTR/ERVL-MaLR	(4)	407	317	2347028
2774	14.9	0.2	8.7	chr20	50470269	50470797	(13973370)	C	MER66D	LTR/ERV1	(0)	484	1	2347029
1800	23.8	4.1	6.3	chr20	53125586	53126105	(11318062)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	1	2352835
868	28.2	12.2	6.6	chr20	54181506	54181961	(10262206)	+	MLT1K	LTR/ERVL-MaLR	111	595	(0)	2355220
2066	11.3	0.0	0.7	chr20	56584084	56584358	(7859809)	+	AluSx1	SINE/Alu	31	303	(9)	2359349
247	6.8	6.4	0.0	chr20	56584359	56584402	(7859765)	+	MLT1F	LTR/ERVL-MaLR	499	545	(3)	2359350
742	23.7	10.6	0.0	chr20	56584815	56584983	(7859184)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2359351
9923	18.1	3.0	4.1	chr20	57641348	57643470	(6800697)	+	L1MC3	LINE/L1	4392	6474	(1729)	2361524
2587	19.0	1.2	4.0	chr20	57643471	57643970	(6800197)	+	MER66B	LTR/ERV1	1	486	(0)	2361532
6956	17.3	1.6	5.4	chr20	57643971	57644666	(6799501)	+	L1MC3	LINE/L1	6475	7124	(1079)	2361524
2372	8.2	0.0	0.0	chr20	58980597	58980889	(5463278)	C	AluSz	SINE/Alu	(19)	293	1	2363760
239	6.7	0.0	0.0	chr20	58980914	58980943	(5463224)	C	ORSL	DNA/hAT-Tip100	(184)	91	62	2363757
189	24.4	0.0	0.0	chr20	58980963	58981003	(5463164)	C	MIRc	SINE/MIR	(115)	153	113	2363761
2314	11.0	0.0	0.0	chr20	59285298	59285598	(5158569)	C	AluSp	SINE/Alu	(12)	301	1	2364196
2867	17.5	1.2	0.4	chr20	59285723	59286204	(5157963)	C	MER66B	LTR/ERV1	(0)	486	1	2364197
414	30.4	15.1	4.3	chr20	60222408	60223027	(4221140)	C	L2b	LINE/L2	(47)	3328	2626	2365660
317	35.0	7.7	4.0	chr20	60223057	60223205	(4220962)	C	MIRb	SINE/MIR	(2)	266	112	2365661
1099	18.1	5.2	0.5	chr20	60223209	60223430	(4220737)	C	MER66B	LTR/ERV1	(0)	486	254	2365662
482	8.6	0.0	0.0	chr20	60223456	60223513	(4220654)	C	AluSz6	SINE/Alu	(25)	287	230	2365663
267	32.5	10.6	3.0	chr20	61206495	61206694	(3237473)	+	L2b	LINE/L2	3125	3341	(34)	2367074
2002	17.2	8.3	1.2	chr20	61206789	61207201	(3236966)	C	MER66A	LTR/ERV1	(7)	471	27	2367075
257	30.4	11.6	2.1	chr20	62104066	62104307	(2339860)	C	L2a	LINE/L2	(653)	2766	2499	2368135
30	12.7	2.9	9.3	chr20	62220278	62220381	(2223786)	+	(CGCCC)n	Simple_repeat	1	107	(0)	2368303
2402	18.1	9.5	0.0	chr20	62435900	62436329	(2007838)	+	MER66A	LTR/ERV1	1	475	(3)	2368564
705	30.5	10.7	0.0	chr20	62436413	62436704	(2007463)	C	L1M4	LINE/L1	(396)	5778	5452	2368565
2275	9.4	1.0	0.0	chr20	62794891	62795188	(1648979)	+	AluSx1	SINE/Alu	1	301	(11)	2368960
724	24.8	9.3	3.5	chr20	62795189	62795343	(1648824)	C	L1MB7	LINE/L1	(155)	6029	5874	2368959
3208	10.1	3.2	0.2	chr20	64254837	64255294	(188873)	C	MER4A1	LTR/ERV1	(0)	472	1	2370629
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
1205	23.4	0.8	1.9	chr21	5231578	5231838	(41478145)	C	7SLRNA	srpRNA	(60)	260	3	2370966
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
1247	22.8	0.6	0.2	chr21	8232546	8235312	(38474671)	+	(TCTC)n	Simple_repeat	1	2784	(0)	2373335
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
276	23.1	0.7	5.6	chr21	9367331	9367505	(37342478)	+	HSAT5	Satellite	1	166	(0)	2374470
292	25.6	0.0	4.8	chr21	9367666	9367880	(37342103)	+	HSAT5	Satellite	1	204	(1)	2374471
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
16	23.2	0.0	2.1	chr21	14216054	14216115	(32493868)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	2377523
12	12.6	0.0	3.6	chr21	15795441	15795468	(30914515)	+	(TTTG)n	Simple_repeat	1	28	(0)	2379629
2601	18.3	0.8	1.9	chr21	28477418	28477901	(18232082)	+	MER66C	LTR/ERV1	63	541	(14)	2396801
349	16.2	0.9	5.0	chr21	28477906	28477972	(18232011)	+	MER66B	LTR/ERV1	430	553	(2)	2396802
445	26.1	5.9	8.0	chr21	28478130	28478413	(18231570)	C	MamGypLTR1a	LTR/Gypsy	(403)	381	111	2396803
2846	15.6	1.9	0.2	chr21	28652788	28653257	(18056726)	+	MER66C	LTR/ERV1	64	541	(14)	2397061
411	33.9	10.0	1.2	chr21	28653266	28653587	(18056396)	+	L2a	LINE/L2	2836	3179	(247)	2397062
354	27.6	4.8	0.0	chr21	28824896	28824993	(17884990)	+	MER81	DNA/hAT-Blackjack	1	103	(11)	2397313
1214	14.4	0.5	0.0	chr21	28825183	28825369	(17884614)	C	MER5A	DNA/hAT-Charlie	(1)	188	1	2397314
24	15.8	1.7	3.3	chr21	28885363	28885422	(17824561)	+	(CATGCG)n	Simple_repeat	1	61	(0)	2397390
189	25.6	11.3	6.0	chr21	31912410	31912542	(14797441)	C	L2a	LINE/L2	(154)	3272	3132	2402311
1451	16.3	0.0	1.3	chr21	31912543	31912781	(14797202)	C	AluJb	SINE/Alu	(13)	299	64	2402317
1786	14.2	3.5	1.4	chr21	33382707	33382987	(13326996)	+	AluJb	SINE/Alu	1	287	(25)	2404844
488	23.8	1.0	0.0	chr21	33383190	33383290	(13326693)	+	MER81	DNA/hAT-Blackjack	2	103	(11)	2404845
3511	20.9	9.1	0.8	chr21	36614776	36615534	(10094449)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	908	2410200
472	25.0	4.3	2.4	chr21	36860174	36860346	(9849637)	C	MIR	SINE/MIR	(88)	174	4	2410569
16	18.1	5.8	1.8	chr21	36860513	36860564	(9849419)	+	(AATTTT)n	Simple_repeat	1	55	(0)	2410570
241	30.1	6.5	3.4	chr21	37563394	37563541	(9146442)	+	MIRb	SINE/MIR	84	236	(32)	2411792
842	26.7	18.1	1.4	chr21	37832641	37833007	(8876976)	+	LTR33A_	LTR/ERVL	2	432	(99)	2412189
2937	15.5	0.8	3.0	chr21	41292094	41292586	(5417397)	C	MER66B	LTR/ERV1	(0)	486	5	2417223
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
12	10.4	6.1	2.9	chr21	43729052	43729084	(2980899)	+	(GCCC)n	Simple_repeat	1	35	(0)	2420709
1908	15.4	1.0	3.1	chr21	43729657	43729975	(2980008)	+	AluJo	SINE/Alu	1	312	(0)	2420710
2063	19.6	4.9	0.0	chr21	45004931	45005334	(1704649)	+	MSTB	LTR/ERVL-MaLR	1	425	(1)	2422398
279	21.0	0.0	1.6	chr21	45556445	45556507	(1153476)	C	MER102c	DNA/hAT-Charlie	(196)	135	74	2422927
790	28.7	16.9	1.8	chr21	45694646	45695142	(1014841)	+	L1MEg	LINE/L1	5576	6148	(1306)	2423098
634	24.8	22.8	3.6	chr21	45695153	45695728	(1014255)	+	LTR41C	LTR/ERVL	1	692	(9)	2423100
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
2088	7.7	6.5	0.3	chr22	17627980	17628265	(33190203)	C	AluSx	SINE/Alu	(7)	305	1	2429397
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1825	11.8	0.0	10.6	chr22	19559047	19559176	(31259292)	C	AluJo	SINE/Alu	(185)	127	1	2432210
205	33.7	0.0	0.9	chr22	20394683	20394759	(30423709)	C	MIRc	SINE/MIR	(72)	158	84	2433233
293	35.0	11.2	5.9	chr22	21666391	21666528	(29151940)	+	L2	LINE/L2	1672	1813	(1606)	2435647
257	32.1	7.4	5.6	chr22	22719982	22720227	(28098241)	+	MIRb	SINE/MIR	13	249	(13)	2437299
867	24.9	12.5	3.3	chr22	23909023	23909363	(26909105)	+	Arthur1	DNA/hAT-Tip100	1	380	(3567)	2439180
2632	14.9	4.5	3.1	chr22	23909364	23909840	(26908628)	C	MER66D	LTR/ERV1	(0)	484	1	2439181
2493	8.9	0.0	0.6	chr22	25007914	25008226	(25810242)	+	AluSx1	SINE/Alu	1	311	(1)	2441233
2881	16.0	1.0	4.0	chr22	25008227	25008335	(25810133)	+	MER66B	LTR/ERV1	392	486	(0)	2441232
531	27.8	3.5	3.5	chr22	25008336	25008508	(25809960)	+	MIRb	SINE/MIR	76	251	(17)	2441230
364	26.7	19.3	2.2	chr22	25008545	25008724	(25809744)	+	MIRb	SINE/MIR	34	251	(17)	2441234
259	30.1	11.7	2.7	chr22	25016455	25016601	(25801867)	C	MIR3	SINE/MIR	(0)	208	47	2441253
1237	15.8	3.4	4.5	chr22	25016612	25016773	(25801695)	+	L1MB5	LINE/L1	5913	6083	(91)	2441254
2760	17.3	1.4	3.2	chr22	25016774	25017100	(25801368)	C	MER66B	LTR/ERV1	(0)	486	166	2441255
20	20.2	0.0	2.3	chr22	25111218	25111260	(25707208)	+	(AC)n	Simple_repeat	1	43	(0)	2441503
13	14.7	3.3	0.0	chr22	25111408	25111437	(25707031)	+	(GCC)n	Simple_repeat	1	31	(0)	2441504
2229	15.7	5.3	10.2	chr22	25122154	25122665	(25695803)	+	MER66B	LTR/ERV1	1	486	(0)	2441533
2284	7.4	0.0	0.3	chr22	25122693	25122990	(25695478)	+	AluY	SINE/Alu	1	297	(14)	2441534
801	34.1	4.1	5.7	chr22	26230409	26230962	(24587506)	C	L2a	LINE/L2	(2)	3424	2879	2443852
2953	16.7	0.2	1.2	chr22	26230963	26231453	(24587015)	C	MER66B	LTR/ERV1	(0)	486	1	2443853
315	30.6	1.0	1.0	chr22	27723837	27723935	(23094533)	C	MLT1K	LTR/ERVL-MaLR	(324)	271	173	2447378
3237	14.5	0.8	1.4	chr22	27724051	27724539	(23093929)	C	MER66B	LTR/ERV1	(0)	486	1	2447379
11	20.8	0.0	2.9	chr22	27856735	27856769	(22961699)	+	(TGTTTC)n	Simple_repeat	1	35	(0)	2447655
2320	14.8	8.2	0.7	chr22	28405690	28406105	(22412363)	+	MER66A	LTR/ERV1	28	477	(1)	2448446
2696	13.8	7.3	0.2	chr22	28473329	28473772	(22344696)	+	MER66A	LTR/ERV1	1	478	(0)	2448561
1999	15.1	3.3	2.8	chr22	28473773	28474031	(22344437)	+	MLT1B	LTR/ERVL-MaLR	126	390	(0)	2448560
13	23.5	3.3	4.8	chr22	29154521	29154580	(21663888)	+	(CCG)n	Simple_repeat	1	62	(0)	2449982
701	16.4	8.3	0.0	chr22	29154717	29154838	(21663630)	+	FLAM_A	SINE/Alu	1	133	(9)	2449983
13	14.0	0.0	5.7	chr22	29306273	29306307	(21512161)	+	(GCCCA)n	Simple_repeat	1	35	(0)	2450301
232	12.4	0.6	0.0	chr22	29306448	29306497	(21511971)	+	MIRc	SINE/MIR	90	144	(124)	2450302
21	36.9	1.0	1.0	chr22	29489042	29489140	(21329328)	+	GA-rich	Low_complexity	1	100	(0)	2450682
180	22.2	0.0	0.0	chr22	29489456	29489491	(21328977)	C	L2	LINE/L2	(1906)	1513	1478	2450683
277	41.1	2.9	1.5	chr22	30516153	30516357	(20302111)	C	L2	LINE/L2	(499)	2920	2713	2452797
2636	17.2	4.3	1.5	chr22	30516560	30517030	(20301438)	C	MER66B	LTR/ERV1	(1)	485	1	2452798
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
19	16.8	0.0	0.0	chr22	30635690	30635695	(20182773)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2453064
15	17.6	0.0	0.0	chr22	30635696	30635727	(20182741)	+	(GGC)n	Simple_repeat	1	32	(0)	2453065
12	15.3	3.5	0.0	chr22	30635736	30635764	(20182704)	+	(GCGCC)n	Simple_repeat	1	30	(0)	2453066
1707	15.1	8.7	0.0	chr22	30920021	30920305	(19898163)	C	AluJo	SINE/Alu	(0)	312	1	2453622
23	33.0	0.0	2.9	chr22	30969596	30969698	(19848770)	+	(CGG)n	Simple_repeat	1	103	(0)	2453683
391	24.6	3.3	2.5	chr22	30969851	30969971	(19848497)	+	MIR1_Amn	SINE/MIR	21	142	(126)	2453684
2213	16.7	4.9	2.0	chr22	32588825	32589263	(18229205)	+	MER66A	LTR/ERV1	27	478	(0)	2457288
232	22.1	0.0	5.6	chr22	32589392	32589463	(18229005)	C	Charlie24	DNA/hAT-Charlie	(37)	2413	2346	2457289
585	30.7	17.9	3.8	chr22	32589566	32589985	(18228483)	C	L3b	LINE/CR1	(112)	3987	3496	2457290
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
1148	28.4	10.1	4.4	chr22	33883379	33884080	(16934388)	+	L2a	LINE/L2	2657	3426	(0)	2459982
14	15.8	0.0	5.1	chr22	37020037	37020075	(13798393)	+	G-rich	Low_complexity	1	39	(0)	2466324
15	17.9	5.0	2.4	chr22	37020112	37020151	(13798317)	+	GA-rich	Low_complexity	1	42	(0)	2466325
227	32.6	8.7	0.0	chr22	37020209	37020303	(13798165)	C	MIRb	SINE/MIR	(3)	265	162	2466326
2050	6.0	0.0	0.8	chr22	37827620	37827869	(12990599)	+	AluY	SINE/Alu	49	296	(15)	2468158
260	36.2	7.9	0.0	chr22	38318136	38318251	(12500217)	+	MIRc	SINE/MIR	58	183	(85)	2469246
243	26.9	6.8	4.6	chr22	38318491	38318608	(12499860)	C	MIR3	SINE/MIR	(8)	200	79	2469247
318	30.2	0.0	11.3	chr22	38318746	38318809	(12499659)	+	Charlie8	DNA/hAT-Charlie	34	89	(2339)	2469248
2046	8.8	3.2	7.9	chr22	38318810	38319137	(12499331)	C	AluSz	SINE/Alu	(0)	312	1	2469249
2393	7.8	1.0	0.0	chr22	38352792	38353109	(12465359)	C	AluSp	SINE/Alu	(0)	313	2	2469341
12	30.3	0.0	2.0	chr22	38353110	38353146	(12465322)	+	(TTTA)n	Simple_repeat	1	37	(0)	2469342
3080	13.2	3.1	1.1	chr22	38565252	38565727	(12252741)	+	MER66B	LTR/ERV1	1	486	(0)	2469795
14	4.9	0.0	0.0	chr22	38570451	38570471	(12247997)	+	(GAGG)n	Simple_repeat	1	21	(0)	2469801
46	20.3	0.0	0.0	chr22	38862519	38862608	(11955860)	+	A-rich	Low_complexity	1	90	(0)	2470428
2263	19.7	2.5	0.8	chr22	39219447	39219916	(11598552)	+	MER66B	LTR/ERV1	7	484	(2)	2471147
782	17.8	0.0	0.0	chr22	40714107	40714224	(10104244)	C	AluJr	SINE/Alu	(194)	118	1	2474176
276	19.8	15.3	0.7	chr22	40714851	40714952	(10103516)	+	L1ME4b	LINE/L1	253	370	(522)	2474177
285	22.7	15.6	4.1	chr22	40714978	40715147	(10103321)	+	L1ME4b	LINE/L1	447	639	(253)	2474177
272	22.7	12.1	1.1	chr22	41021480	41021600	(9796868)	C	MIRc	SINE/MIR	(111)	157	22	2474931
185	23.5	3.8	5.6	chr22	41021974	41022027	(9796441)	+	MamRTE1	LINE/RTE-BovB	778	830	(2982)	2474933
2195	7.7	5.2	0.7	chr22	41590323	41590619	(9227849)	+	AluSp	SINE/Alu	2	312	(1)	2476271
1559	18.1	1.3	5.0	chr22	41666590	41666777	(9151691)	+	MER2	DNA/TcMar-Tigger	119	304	(41)	2476461
2098	11.9	2.9	0.3	chr22	41667185	41667487	(9150981)	+	AluSx1	SINE/Alu	1	311	(1)	2476466
309	16.3	6.5	10.4	chr22	42091574	42091669	(8726799)	C	MIRc	SINE/MIR	(34)	196	103	2477409
19	29.8	3.1	2.0	chr22	43923595	43923691	(6894777)	+	(CCCAGC)n	Simple_repeat	1	100	(0)	2481023
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
2329	8.4	0.0	3.2	chr22	43940859	43941184	(6877284)	+	AluSg	SINE/Alu	1	310	(0)	2481061
491	34.2	8.2	2.1	chr22	43941358	43941596	(6876872)	+	MIR	SINE/MIR	8	262	(0)	2481062
2054	16.1	0.0	0.0	chr22	44464282	44464579	(6353889)	C	AluJb	SINE/Alu	(14)	298	1	2482006
607	16.0	2.9	0.0	chr22	44464621	44464720	(6353748)	C	AluJr	SINE/Alu	(179)	133	31	2482007
3085	16.0	0.2	1.2	chr22	44464721	44465201	(6353267)	C	MER66A	LTR/ERV1	(0)	478	3	2482008
268	27.7	4.6	5.2	chr22	44591173	44591335	(6227133)	C	MIRb	SINE/MIR	(72)	196	28	2482252
362	27.8	12.0	3.6	chr22	44669941	44670108	(6148360)	+	MER5A	DNA/hAT-Charlie	5	188	(1)	2482389
19	16.0	5.9	4.2	chr22	44820850	44820917	(5997551)	+	(CTGGCG)n	Simple_repeat	1	72	(0)	2482720
2923	13.7	0.0	1.3	chr22	45793766	45794231	(5024237)	C	MER66B	LTR/ERV1	(0)	486	27	2484567
2470	9.3	0.0	0.3	chr22	47206514	47206824	(3611644)	+	AluSx1	SINE/Alu	1	310	(2)	2486529
2677	14.2	3.3	2.2	chr22	47206825	47207027	(3611441)	+	MER66A	LTR/ERV1	268	478	(0)	2486528
197	30.8	16.2	0.5	chr22	47252126	47252389	(3566079)	C	L2c	LINE/L2	(39)	3336	3029	2486598
769	12.3	9.6	0.0	chr22	47252418	47252539	(3565929)	+	MER66B	LTR/ERV1	340	474	(12)	2486599
291	25.7	6.0	5.2	chr22	47252554	47252668	(3565800)	C	MIRb	SINE/MIR	(34)	234	119	2486600
2831	14.9	0.2	3.3	chr22	48284765	48285255	(2533213)	+	MER66A	LTR/ERV1	1	476	(2)	2488061
5243	17.4	7.1	7.8	chr22	48285256	48287076	(2531392)	+	L1MC2	LINE/L1	4969	6752	(10)	2488056
196	32.2	4.0	6.4	chr22	48668849	48668927	(2149541)	+	X6B_LINE	LINE/CR1	901	975	(97)	2488480
1493	22.6	9.0	0.3	chr22	48668928	48669260	(2149208)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2488481
196	32.2	4.0	6.4	chr22	48669261	48669336	(2149132)	+	X6B_LINE	LINE/CR1	976	1052	(20)	2488480
1014	13.6	9.8	0.0	chr22	49091820	49091995	(1726473)	C	MER66B	LTR/ERV1	(0)	486	292	2488975
17	0.0	0.0	0.0	chr22	49092009	49092027	(1726441)	+	(A)n	Simple_repeat	1	19	(0)	2488976
346	29.9	3.9	0.7	chr22	49092085	49092232	(1726236)	+	MLT1C	LTR/ERVL-MaLR	286	438	(29)	2488977
2145	17.9	1.3	0.3	chr22	49755757	49756238	(1062230)	+	MER66C	LTR/ERV1	91	541	(14)	2489713
431	29.4	4.8	7.8	chr22	49852801	49852929	(965539)	C	MER58B	DNA/hAT-Charlie	(177)	164	29	2489840
12	13.6	2.8	5.4	chr22	49853226	49853261	(965207)	+	(CGCCC)n	Simple_repeat	1	37	(0)	2489842
13	9.4	8.3	2.6	chr22	49936340	49936375	(882093)	+	(CGC)n	Simple_repeat	1	39	(0)	2489985
2491	2.4	0.3	0.0	chr22	50341713	50342004	(476464)	+	AluYm1	SINE/Alu	1	293	(18)	2490486
546	21.8	29.2	4.0	chr22	50342271	50342602	(475866)	C	LTR41	LTR/ERVL	(308)	460	5	2490487
209	18.4	0.0	0.0	chr3	11096481	11096518	(187199041)	C	MIRc	SINE/MIR	(119)	149	112	2510744
9762	16.9	3.1	2.2	chr3	12781916	12782355	(185513204)	+	L1MC3	LINE/L1	5845	6278	(1507)	2514089
2720	11.8	3.5	6.8	chr3	12782356	12782856	(185512703)	C	MER66D	LTR/ERV1	(0)	484	1	2514099
365	22.8	2.5	0.0	chr3	13891826	13891904	(184403655)	+	MLT1J	LTR/ERVL-MaLR	99	179	(333)	2516108
320	17.6	12.8	0.0	chr3	14145053	14145120	(184150439)	+	FLAM_A	SINE/Alu	52	129	(13)	2516366
17	23.7	4.4	2.8	chr3	14947927	14947994	(183347565)	+	(GGC)n	Simple_repeat	1	71	(0)	2517904
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
25	19.6	2.8	7.3	chr3	14948527	14948633	(183346926)	+	G-rich	Low_complexity	1	110	(0)	2517906
449	30.4	19.9	4.1	chr3	16399387	16400293	(181895266)	+	L2	LINE/L2	1973	3058	(361)	2520433
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
12	16.9	0.0	0.0	chr3	24494523	24494549	(173801010)	+	(CGCC)n	Simple_repeat	1	27	(0)	2531964
13	23.8	2.2	2.1	chr3	24495068	24495113	(173800446)	+	(CCCCG)n	Simple_repeat	1	47	(0)	2531965
15	19.6	8.2	1.5	chr3	29280643	29280703	(169014856)	+	(CCTT)n	Simple_repeat	1	66	(0)	2538963
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
49	27.8	0.0	0.0	chr3	29281115	29281236	(169014323)	+	(TTTT)n	Simple_repeat	1	122	(0)	2538965
2158	18.1	1.2	12.4	chr3	31057150	31057697	(167237862)	+	MER66B	LTR/ERV1	1	486	(0)	2541489
6286	24.1	6.2	2.7	chr3	31057698	31060067	(167235492)	C	L1MD2	LINE/L1	(1655)	4491	2026	2541484
14	17.5	0.0	0.0	chr3	32570815	32570846	(165724713)	+	(GGCGGC)n	Simple_repeat	1	32	(0)	2544140
13	14.8	0.0	3.1	chr3	32570874	32570905	(165724654)	+	G-rich	Low_complexity	1	32	(0)	2544141
39	22.4	4.3	2.8	chr3	32781872	32782009	(165513550)	+	(TTATT)n	Simple_repeat	1	144	(0)	2544654
324	26.9	5.1	7.4	chr3	34091680	34091802	(164203757)	C	MIRc	SINE/MIR	(77)	153	34	2546933
14	18.3	5.8	5.5	chr3	37176559	37176627	(161118932)	+	(GGAGGCC)n	Simple_repeat	1	73	(0)	2551103
2378	10.4	0.0	0.3	chr3	41833287	41833595	(156461964)	C	AluY	SINE/Alu	(3)	308	1	2558014
8688	7.8	0.9	1.5	chr3	41833596	41833898	(156461661)	C	L1PA8	LINE/L1	(1731)	4415	4113	2558013
786	30.4	9.3	4.1	chr3	42670171	42670468	(155625091)	C	MLT1N2	LTR/ERVL-MaLR	(98)	464	141	2559459
2658	14.3	8.0	1.1	chr3	42670469	42670920	(155624639)	C	MER66B	LTR/ERV1	(0)	486	1	2559460
13	28.4	2.2	6.5	chr3	44477552	44477642	(153817917)	+	(GCC)n	Simple_repeat	1	93	(0)	2562165
2344	10.9	0.0	0.6	chr3	46644394	46644704	(151650855)	C	AluSc	SINE/Alu	(0)	309	1	2565727
3045	16.7	0.0	1.8	chr3	46644771	46645265	(151650294)	C	MER66B	LTR/ERV1	(0)	486	1	2565728
287	22.0	8.4	6.0	chr3	46845188	46845303	(151450256)	C	MIR	SINE/MIR	(49)	159	41	2566014
193	31.2	2.4	2.4	chr3	47324189	47324270	(150971289)	+	L2c	LINE/L2	3269	3350	(37)	2566924
31	9.3	0.0	0.0	chr3	47324278	47324324	(150971235)	+	(T)n	Simple_repeat	1	47	(0)	2566925
1575	19.3	3.3	2.6	chr3	47324552	47324856	(150970703)	+	AluJr	SINE/Alu	1	307	(5)	2566926
2093	18.2	13.8	0.6	chr3	47961895	47962365	(150333194)	+	MER66C	LTR/ERV1	1	543	(12)	2568340
855	22.8	3.8	5.8	chr3	47962364	47962627	(150332932)	+	LTR41C	LTR/ERVL	384	750	(8)	2568339
1713	13.5	2.4	7.9	chr3	51502262	51502565	(146792994)	+	AluJb	SINE/Alu	5	291	(21)	2574467
2192	10.1	0.3	2.7	chr3	53201530	53201827	(145093732)	+	AluSx1	SINE/Alu	3	293	(19)	2577189
2488	17.3	0.7	5.0	chr3	53201828	53201929	(145093630)	+	MER66B	LTR/ERV1	385	486	(0)	2577188
273	25.5	6.0	13.5	chr3	53201959	53202121	(145093438)	+	L1M5	LINE/L1	5433	5582	(541)	2577190
2515	15.7	3.7	1.8	chr3	56401693	56401829	(141893730)	C	MER66B	LTR/ERV1	(23)	463	315	2582053
2243	11.9	3.0	2.2	chr3	56401830	56402190	(141893369)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2582054
215	23.0	1.9	0.0	chr3	56557717	56557774	(141737785)	+	L2a	LINE/L2	3328	3425	(1)	2582353
238	30.1	4.0	0.0	chr3	56557874	56557946	(141737613)	C	L2c	LINE/L2	(33)	3354	3279	2582354
2089	15.1	1.0	0.6	chr3	61664550	61664860	(136630699)	+	AluJb	SINE/Alu	1	312	(0)	2591025
2517	7.3	0.3	0.0	chr3	62486165	62486466	(135809093)	+	AluSc8	SINE/Alu	1	303	(8)	2592340
350	32.8	1.1	9.0	chr3	62486609	62486624	(135808935)	+	L3	LINE/CR1	3903	3918	(181)	2592341
2222	19.5	2.9	4.7	chr3	62486625	62487119	(135808440)	C	MER66B	LTR/ERV1	(0)	486	1	2592342
16	0.0	0.0	0.0	chr3	62895776	62895793	(135399766)	+	(T)n	Simple_repeat	1	18	(0)	2593059
2609	19.2	0.4	3.0	chr3	62895887	62896385	(135399174)	C	MER66B	LTR/ERV1	(0)	486	1	2593060
369	32.2	6.3	5.8	chr3	64023822	64024009	(134271550)	C	MIRb	SINE/MIR	(59)	209	21	2595037
755	29.6	12.1	3.1	chr3	65274812	65275293	(133020266)	C	MLT1K	LTR/ERVL-MaLR	(51)	544	14	2597165
2785	13.3	8.8	0.5	chr3	66668614	66669058	(131626501)	+	MER66B	LTR/ERV1	1	486	(0)	2599660
814	28.5	5.4	2.5	chr3	66669059	66669394	(131626165)	+	MLT1I	LTR/ERVL-MaLR	61	404	(7)	2599659
896	32.5	10.9	0.6	chr3	69445496	69446016	(128849543)	+	L2a	LINE/L2	2832	3426	(0)	2604175
3319	15.4	0.0	0.6	chr3	69711506	69711994	(128583565)	+	MER66B	LTR/ERV1	1	486	(0)	2604678
2506	6.5	0.0	0.3	chr3	69759786	69760077	(128535482)	C	AluY	SINE/Alu	(20)	291	1	2604768
1407	18.3	14.9	4.5	chr3	69760301	69760723	(128534836)	C	MER66C	LTR/ERV1	(20)	535	61	2604769
275	29.6	3.8	6.7	chr3	72152378	72152491	(126143068)	C	MER5A	DNA/hAT-Charlie	(17)	172	60	2608581
246	30.0	8.3	0.9	chr3	73121473	73121583	(125173976)	C	MER102a	DNA/hAT-Charlie	(96)	234	115	2610670
2781	18.2	0.8	0.6	chr3	73121595	73122079	(125173480)	C	MER66B	LTR/ERV1	(0)	486	1	2610671
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
3111	14.2	0.2	0.4	chr3	86273751	86274237	(112021322)	+	MER66B	LTR/ERV1	1	486	(0)	2628068
14	14.2	0.0	5.7	chr3	88058632	88058666	(110236893)	+	(GGC)n	Simple_repeat	1	35	(0)	2630310
23	22.5	4.5	3.3	chr3	88058915	88059002	(110236557)	+	(CCG)n	Simple_repeat	1	92	(0)	2630311
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
20	23.6	0.0	0.0	chr3	88059419	88059468	(110236091)	+	(GGC)n	Simple_repeat	1	50	(0)	2630314
12	12.0	3.7	0.0	chr3	88149520	88149546	(110146013)	+	(TAATT)n	Simple_repeat	1	28	(0)	2630438
886	15.1	1.4	1.4	chr3	94062637	94062782	(104232777)	C	AluJr	SINE/Alu	(15)	297	152	2633773
447	22.7	3.5	0.9	chr3	94063363	94063473	(104232086)	+	L2a	LINE/L2	3313	3426	(0)	2633774
312	23.9	3.7	0.3	chr3	94063510	94063610	(104231949)	C	L1MD3	LINE/L1	(37)	7958	7775	2633775
1501	14.9	1.0	14.9	chr3	100333848	100334196	(97961363)	+	AluJo	SINE/Alu	1	300	(12)	2641562
344	14.5	6.2	3.8	chr3	100334447	100334525	(97961034)	+	MER63B	DNA/hAT-Blackjack	354	434	(2)	2641563
1856	15.4	0.0	1.1	chr3	101622915	101623193	(96672366)	C	AluJb	SINE/Alu	(10)	302	27	2643327
516	15.0	5.0	0.0	chr3	101623194	101623300	(96672259)	C	LTR27	LTR/ERV1	(270)	366	179	2643328
1470	14.9	1.9	3.0	chr3	101623331	101623609	(96671950)	C	MER66B	LTR/ERV1	(14)	541	252	2643329
790	15.5	0.0	0.0	chr3	101623610	101623725	(96671834)	C	AluJr	SINE/Alu	(194)	118	3	2643330
2428	18.5	3.3	1.7	chr3	104142054	104142531	(94153028)	+	MER66B	LTR/ERV1	1	486	(0)	2646689
1733	19.9	5.1	1.6	chr3	110090183	110090627	(88204932)	C	MER31A	LTR/ERV1	(0)	661	6	2654826
3074	14.9	6.8	0.2	chr3	110090708	110091212	(88204347)	C	MER66C	LTR/ERV1	(14)	541	1	2654827
3685	12.7	0.8	0.0	chr3	111392888	111393416	(86902143)	+	MER66C	LTR/ERV1	2	534	(21)	2656462
30	13.7	0.0	0.0	chr3	111393448	111393495	(86902064)	+	(A)n	Simple_repeat	1	48	(0)	2656463
3372	18.9	8.4	11.3	chr3	111393503	111394530	(86901029)	+	L1MA4A	LINE/L1	6722	7717	(5)	2656460
567	31.5	3.1	5.2	chr3	114153064	114153331	(84142228)	+	MIRb	SINE/MIR	7	268	(0)	2660369
2240	10.1	1.7	1.3	chr3	115919613	115919910	(82375649)	C	AluSx	SINE/Alu	(13)	299	1	2662778
3129	16.1	4.5	4.0	chr3	115919912	115920570	(82374989)	C	L1MB1	LINE/L1	(221)	6445	5783	2662779
12	14.7	3.3	0.0	chr3	119322765	119322794	(78972765)	+	(GCTCCT)n	Simple_repeat	1	31	(0)	2667375
22	24.2	0.0	0.0	chr3	119323450	119323513	(78972046)	+	(T)n	Simple_repeat	1	64	(0)	2667376
243	24.2	13.3	0.0	chr3	119323684	119323774	(78971785)	+	MIRc	SINE/MIR	50	154	(114)	2667377
204	34.1	10.8	0.0	chr3	119677683	119677773	(78617786)	C	MIR1_Amn	SINE/MIR	(97)	133	32	2668000
26677	2.4	0.0	0.1	chr3	125936639	125942696	(72352863)	+	L1PA2	LINE/L1	125	6155	(0)	2677921
285	26.8	10.2	6.7	chr3	127074766	127074973	(71220586)	C	MLT1H	LTR/ERVL-MaLR	(17)	532	317	2679464
318	24.9	11.4	10.3	chr3	127075258	127075378	(71220181)	C	MLT1H	LTR/ERVL-MaLR	(100)	449	333	2679465
10452	8.6	9.6	0.1	chr3	127075379	127076805	(71218754)	C	LTR12C	LTR/ERV1	(0)	1579	3	2679466
240	33.4	10.0	4.6	chr3	127354789	127355050	(70940509)	+	L2a	LINE/L2	2932	3234	(192)	2679898
2958	17.7	0.2	1.4	chr3	127355051	127355542	(70940017)	C	MER66B	LTR/ERV1	(0)	486	1	2679899
2094	8.4	2.1	1.4	chr3	128680350	128680635	(69614924)	C	AluSg	SINE/Alu	(22)	288	1	2682211
18	29.3	1.5	0.0	chr3	128845956	128846021	(69449538)	+	(CCAACAG)n	Simple_repeat	1	67	(0)	2682554
346	28.9	4.3	5.6	chr3	128970693	128970835	(69324724)	+	MIRc	SINE/MIR	58	198	(70)	2682780
607	29.6	1.8	0.6	chr3	128971028	128971190	(69324369)	+	MIRb	SINE/MIR	34	198	(70)	2682781
2177	12.3	0.7	0.0	chr3	129027674	129027982	(69267577)	+	AluSx1	SINE/Alu	1	311	(1)	2682902
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
2831	14.8	0.6	9.1	chr3	129940158	129940685	(68354874)	+	MER66D	LTR/ERV1	2	484	(0)	2684714
1197	29.5	11.6	5.0	chr3	129940686	129940910	(68354649)	+	MER115	DNA/hAT-Tip100	278	543	(150)	2684713
631	21.4	4.1	1.4	chr3	129940914	129941055	(68354504)	C	MLT1C	LTR/ERVL-MaLR	(12)	455	310	2684715
4295	25.3	3.7	2.4	chr3	133904130	133905316	(64390243)	C	L1MEg	LINE/L1	(2517)	3802	2596	2690638
2227	16.8	6.6	3.0	chr3	133905317	133905782	(64389777)	C	MER66B	LTR/ERV1	(0)	486	3	2690647
15	8.1	0.0	3.6	chr3	133927527	133927554	(64368005)	+	(GCGT)n	Simple_repeat	1	28	(0)	2690686
455	25.0	5.3	0.0	chr3	133927850	133927973	(64367586)	+	MIRb	SINE/MIR	118	248	(20)	2690687
480	29.4	4.5	2.9	chr3	137820842	137821016	(60474543)	+	MIRb	SINE/MIR	9	186	(82)	2696567
2673	16.2	0.4	1.3	chr3	137963392	137963855	(60331704)	C	MER66B	LTR/ERV1	(0)	486	27	2696743
432	33.9	4.9	0.0	chr3	138593851	138594045	(59701514)	C	MIRb	SINE/MIR	(34)	234	30	2697756
6917	11.9	1.5	1.6	chr3	140815567	140816628	(57478931)	+	L1MC1	LINE/L1	5039	6105	(228)	2701353
2456	18.8	0.4	4.4	chr3	140816629	140817133	(57478426)	C	MER66B	LTR/ERV1	(0)	486	2	2701354
1307	24.4	7.8	2.0	chr3	141370088	141370438	(56925121)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	64	2702204
27	0.0	0.0	0.0	chr3	142829228	142829253	(55466306)	+	(AAAT)n	Simple_repeat	1	26	(0)	2704763
209	32.1	12.0	5.2	chr3	151033833	151034065	(47261494)	+	L2	LINE/L2	255	505	(2914)	2716219
3972	20.4	8.2	4.3	chr3	158915485	158916541	(39379018)	C	MER66-int	LTR/ERV1	(5571)	1105	4	2727479
919	18.4	1.1	0.0	chr3	158916545	158916718	(39378841)	C	MER66B	LTR/ERV1	(0)	486	311	2727479
469	19.4	0.0	0.0	chr3	158916725	158916814	(39378745)	+	MER66B	LTR/ERV1	400	486	(0)	2727482
11017	9.4	2.7	2.9	chr3	159933601	159935147	(38360412)	C	THE1B-int	LTR/ERVL-MaLR	(37)	1543	1	2728978
1596	19.5	6.5	1.6	chr3	174541812	174542236	(23753323)	C	MER66D	LTR/ERV1	(4)	480	62	2749123
2799	17.5	1.2	0.4	chr3	175896214	175896695	(22398864)	+	MER66B	LTR/ERV1	1	486	(0)	2750999
1130	19.0	0.0	0.0	chr3	179261583	179261782	(19033777)	+	Tigger5	DNA/TcMar-Tigger	29	228	(2178)	2755853
2368	19.7	2.7	3.7	chr3	180671233	180671559	(17624000)	+	MER66B	LTR/ERV1	157	486	(0)	2758138
719	15.2	0.0	3.9	chr3	180671560	180671600	(17623959)	+	Tigger1	DNA/TcMar-Tigger	678	714	(1704)	2758137
818	14.4	0.0	0.0	chr3	180671612	180671722	(17623837)	C	AluSx	SINE/Alu	(63)	249	139	2758140
10294	12.8	3.7	1.0	chr3	180671723	180672311	(17623248)	+	Tigger1	DNA/TcMar-Tigger	723	1328	(1090)	2758141
281	20.0	1.4	0.0	chr3	182682024	182682093	(15613466)	C	L1MA8	LINE/L1	(4)	6287	6217	2761408
2329	8.2	0.0	0.7	chr3	184298420	184298725	(13996834)	+	AluSx1	SINE/Alu	1	304	(8)	2764409
8098	3.7	0.3	0.0	chr3	193606271	193608088	(4687471)	C	L1PA5	LINE/L1	(4)	6150	4326	2779756
1010	9.3	4.4	2.8	chr4	498506	498682	(189715873)	+	L1MA6	LINE/L1	5769	5948	(352)	2789187
2460	6.6	0.0	0.3	chr4	498722	499023	(189715532)	C	AluSc	SINE/Alu	(8)	301	1	2789188
714	15.5	4.6	3.1	chr4	2009803	2009931	(188204624)	C	AluJo	SINE/Alu	(180)	132	2	2790937
989	23.8	5.2	4.2	chr4	2010076	2010382	(188204173)	+	MER63D	DNA/hAT-Blackjack	314	625	(436)	2790938
67	1.6	0.0	0.0	chr4	3074877	3074940	(187139615)	+	(CAG)n	Simple_repeat	1	64	(0)	2792719
54	20.4	0.0	0.0	chr4	3074941	3075052	(187139503)	+	(CGC)n	Simple_repeat	1	112	(0)	2792720
1617	17.5	5.1	2.5	chr4	3868047	3868444	(186346111)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	24	2793740
958	23.0	0.5	0.9	chr4	6632103	6632317	(183582238)	C	MLT1A	LTR/ERVL-MaLR	(160)	214	1	2798776
2195	16.7	8.0	2.9	chr4	6632407	6632624	(183581931)	C	MER66B	LTR/ERV1	(7)	479	267	2798780
2049	12.2	0.0	0.3	chr4	6632625	6632918	(183581637)	C	AluSx	SINE/Alu	(19)	293	1	2798781
325	29.5	11.8	4.1	chr4	7123932	7124150	(183090405)	+	MIRc	SINE/MIR	12	249	(19)	2799647
2071	20.2	6.8	4.8	chr4	7124257	7124470	(183090085)	C	MER66B	LTR/ERV1	(2)	484	267	2799648
1920	5.4	8.4	0.0	chr4	7124471	7124711	(183089844)	C	AluSg4	SINE/Alu	(47)	263	1	2799649
229	27.9	11.4	0.0	chr4	13548967	13549060	(176665495)	+	MIR3	SINE/MIR	79	187	(81)	2809474
2469	18.2	5.0	0.8	chr4	19947825	19948327	(170266228)	C	MER41B	LTR/ERV1	(38)	596	16	2820256
195	15.2	16.4	0.0	chr4	25203273	25203318	(165011237)	+	L2b	LINE/L2	3316	3370	(5)	2828486
357	28.0	9.6	3.9	chr4	25203337	25203492	(165011063)	C	MIRb	SINE/MIR	(95)	173	8	2828487
13	11.1	3.2	3.1	chr4	25913543	25913573	(164300982)	+	(GGATG)n	Simple_repeat	1	32	(0)	2829997
1402	20.7	15.5	1.3	chr4	32023811	32024201	(158190354)	+	LTR48	LTR/ERV1	1	457	(330)	2838897
3033	16.1	4.8	0.0	chr4	32024229	32024743	(158189812)	C	MER66C	LTR/ERV1	(14)	541	1	2838898
2109	19.5	1.6	5.9	chr4	32797990	32798497	(157416058)	+	MER66B	LTR/ERV1	1	486	(0)	2839931
862	28.3	5.2	8.4	chr4	32798577	32798958	(157415597)	+	MER66-int	LTR/ERV1	31	399	(6277)	2839931
271	24.0	3.9	6.5	chr4	39459232	39459338	(150755217)	C	MIR	SINE/MIR	(0)	262	159	2849675
225	27.0	3.1	1.6	chr4	40395769	40395832	(149818723)	C	MLT1N2	LTR/ERVL-MaLR	(479)	83	19	2851923
2120	10.9	0.3	1.4	chr4	40927491	40927784	(149286771)	C	AluJb	SINE/Alu	(21)	291	1	2853129
450	33.6	12.6	5.8	chr4	42479386	42479767	(147734788)	+	L3	LINE/CR1	2822	3233	(866)	2855694
348	25.2	11.7	1.9	chr4	42479787	42479948	(147734607)	+	L1ME3A	LINE/L1	5955	6134	(39)	2855685
41	0.0	0.0	0.0	chr4	42479997	42480031	(147734524)	+	(TG)n	Simple_repeat	1	35	(0)	2855695
2054	17.3	3.1	17.6	chr4	43560176	43560744	(146653811)	+	MER66D	LTR/ERV1	1	484	(0)	2857140
2129	21.7	6.7	6.6	chr4	43560745	43560780	(146653775)	+	L1MB8	LINE/L1	5780	5808	(1198)	2857138
1082	17.9	4.0	0.0	chr4	43560781	43560998	(146653557)	+	L1MA8	LINE/L1	6061	6287	(4)	2857141
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
12	13.6	6.8	4.3	chr4	56049424	56049467	(134165088)	+	G-rich	Low_complexity	1	47	(0)	2871926
12	25.4	4.7	3.0	chr4	67545660	67545723	(122668832)	+	(CCTCCAG)n	Simple_repeat	1	67	(0)	2887099
3240	9.4	0.6	5.7	chr4	71857845	71858351	(118356204)	+	LTR21A	LTR/ERV1	1	481	(0)	2892754
12276	11.1	3.2	1.6	chr4	71858352	71859008	(118355547)	C	MER4B-int	LTR/ERV1	(1678)	5080	4438	2892753
15	8.6	7.3	4.5	chr4	72568595	72568635	(117645920)	+	GA-rich	Low_complexity	1	44	(0)	2893667
10618	11.5	4.1	0.5	chr4	72606284	72607846	(117606709)	+	THE1B-int	LTR/ERVL-MaLR	3	1624	(7)	2893727
251	26.5	5.7	2.4	chr4	74932832	74932916	(115281639)	+	L2c	LINE/L2	3291	3378	(9)	2896884
24	7.9	2.4	2.3	chr4	74933047	74933088	(115281467)	+	(GGC)n	Simple_repeat	1	43	(0)	2896885
1202	21.6	10.0	11.9	chr4	75566833	75567430	(114647125)	+	L1MC4	LINE/L1	7466	8034	(8)	2897631
1722	14.2	4.1	9.5	chr4	75567446	75567557	(114646998)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	265	2897632
2219	18.0	3.5	4.3	chr4	75567558	75568045	(114646510)	C	MER66B	LTR/ERV1	(0)	486	3	2897633
609	21.6	8.5	3.0	chr4	77156265	77156464	(113058091)	C	L1MC5a	LINE/L1	(2)	2775	2564	2900479
530	28.5	11.0	7.8	chr4	77707849	77708156	(112506399)	C	LTR16A	LTR/ERVL	(115)	323	5	2901050
19	17.2	0.0	2.3	chr4	81214154	81214196	(109000359)	+	A-rich	Low_complexity	1	43	(0)	2905804
407	32.8	9.8	5.8	chr4	81913102	81913344	(108301211)	C	MIRb	SINE/MIR	(6)	262	9	2906838
678	23.4	0.0	2.1	chr4	81913263	81913406	(108301149)	+	MIR	SINE/MIR	13	153	(109)	2906839
1008	21.6	21.2	2.8	chr4	81913407	81913949	(108300606)	+	LTR50	LTR/ERVL	1	670	(125)	2906840
2243	14.2	4.4	0.3	chr4	83252500	83252873	(106961682)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2909154
1127	21.9	4.4	0.4	chr4	83252874	83253132	(106961423)	C	LTR41B	LTR/ERVL	(488)	270	1	2909153
203	30.0	9.1	1.2	chr4	83260489	83260569	(106953986)	C	MIRb	SINE/MIR	(28)	240	153	2909173
522	21.2	4.0	8.6	chr4	83260570	83260755	(106953800)	C	MER66B	LTR/ERV1	(0)	486	310	2909174
355	32.6	9.1	3.5	chr4	88378539	88378735	(101835820)	C	MIR	SINE/MIR	(36)	226	15	2917063
23	31.3	5.2	0.7	chr4	88379171	88379305	(101835250)	+	G-rich	Low_complexity	1	142	(0)	2917064
2512	9.2	0.0	1.0	chr4	95197981	95198286	(95016269)	C	AluSx	SINE/Alu	(7)	305	3	2926104
719	31.9	11.3	4.8	chr4	98728313	98728750	(91485805)	C	L2c	LINE/L2	(0)	3387	2918	2930556
325	33.0	3.1	1.2	chr4	98929973	98930125	(91284430)	+	MIR	SINE/MIR	29	179	(89)	2930947
2348	9.5	0.3	0.0	chr4	99562825	99563120	(90651435)	C	AluSq2	SINE/Alu	(16)	297	1	2931837
17	27.4	1.4	2.9	chr4	99946256	99946324	(90268231)	+	G-rich	Low_complexity	1	70	(0)	2932375
25	26.9	1.7	5.0	chr4	99946616	99946732	(90267823)	+	(GGCGGC)n	Simple_repeat	1	119	(0)	2932376
3067	14.6	6.2	0.8	chr4	101523675	101524192	(88690363)	+	MER66C	LTR/ERV1	1	548	(7)	2934486
219	30.6	15.7	6.3	chr4	101524318	101524586	(88689969)	+	L2a	LINE/L2	2307	2605	(814)	2934487
198	34.9	0.0	0.0	chr4	111847838	111847900	(78366655)	+	L2c	LINE/L2	3283	3345	(42)	2948324
19	20.8	0.0	0.0	chr4	118888870	118888913	(71325642)	+	(GGC)n	Simple_repeat	1	44	(0)	2957660
2262	10.5	0.7	0.0	chr4	121869543	121869838	(68344717)	C	AluSx1	SINE/Alu	(14)	298	1	2961731
21	11.0	2.6	0.0	chr4	129093794	129093832	(61120723)	+	(AAAC)n	Simple_repeat	1	40	(0)	2971744
1596	18.8	2.1	1.1	chr4	130343663	130343938	(59870617)	C	AluJr	SINE/Alu	(33)	279	1	2973286
1372	24.4	9.8	8.1	chr4	131619844	131620374	(58594181)	+	MER66C	LTR/ERV1	1	541	(14)	2974837
332	27.6	0.0	1.3	chr4	131620427	131620503	(58594052)	C	LTR40A1	LTR/ERVL	(508)	76	1	2974836
5183	15.0	4.5	1.4	chr4	135711248	135712119	(54502436)	+	THE1D-int	LTR/ERVL-MaLR	1	901	(679)	2979588
319	16.7	3.2	0.0	chr4	135712120	135712179	(54502376)	+	THE1D-int	LTR/ERVL-MaLR	1570	1631	(0)	2979588
9919	9.8	5.8	0.1	chr4	136395167	136396652	(53817903)	+	LTR12C	LTR/ERV1	3	1579	(0)	2980404
1634	24.3	12.3	1.9	chr4	137909987	137910565	(52303990)	+	MER76	LTR/ERVL	1	648	(43)	2982252
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
27	8.8	0.0	0.0	chr4	139666098	139666134	(50548421)	+	(GT)n	Simple_repeat	1	37	(0)	2985077
13	15.5	11.9	1.5	chr4	140427653	140427711	(49786844)	+	(GCGCGT)n	Simple_repeat	1	66	(0)	2986212
2843	13.7	5.0	2.5	chr4	140940538	140941009	(49273546)	+	MER66D	LTR/ERV1	1	484	(0)	2987032
336	26.0	8.9	0.0	chr4	140941136	140941258	(49273297)	C	L4_A_Mam	LINE/RTE-X	(184)	4806	4672	2987033
23	21.4	1.6	1.6	chr4	151409002	151409062	(38805493)	+	(GGC)n	Simple_repeat	1	62	(0)	3001452
36	7.2	3.5	0.0	chr4	151409092	151409149	(38805406)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	3001453
27	6.1	0.0	0.0	chr4	152535997	152536031	(37678524)	+	(CAGCGG)n	Simple_repeat	1	35	(0)	3003140
14	22.8	0.0	0.0	chr4	152536311	152536346	(37678209)	+	(CGC)n	Simple_repeat	1	36	(0)	3003141
15	27.2	3.5	0.0	chr4	153249579	153249636	(36964919)	+	(CCGCCC)n	Simple_repeat	1	60	(0)	3004303
12	20.8	0.0	2.9	chr4	173335389	173335423	(16879132)	+	(CTGGC)n	Simple_repeat	1	35	(0)	3031451
2514	18.1	2.8	0.5	chr4	176676744	176677192	(13537363)	+	MER66B	LTR/ERV1	27	486	(0)	3035871
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
306	31.8	4.3	0.9	chr4	186792650	186792760	(3421795)	+	L2a	LINE/L2	3304	3418	(8)	3050149
2998	16.0	1.1	0.0	chr4	186792765	186793282	(3421273)	C	MER66C	LTR/ERV1	(31)	524	1	3050150
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
529	30.1	7.8	5.8	chr5	1310594	1310833	(180227426)	+	L1M5	LINE/L1	3039	3283	(2863)	3056128
382	10.5	14.1	0.2	chr5	1310840	1310919	(180227340)	C	MER66B	LTR/ERV1	(14)	541	406	3056129
3616	10.6	13.6	0.5	chr5	1310920	1311470	(180226789)	C	MER51A	LTR/ERV1	(0)	634	1	3056130
269	24.6	1.5	0.0	chr5	1374561	1374625	(180163634)	+	MER66-int	LTR/ERV1	6324	6389	(287)	3056185
760	19.8	12.7	0.0	chr5	1374709	1374880	(180163379)	C	MER66C	LTR/ERV1	(14)	541	345	3056191
1425	19.2	8.3	0.0	chr5	1374902	1375209	(180163050)	+	MER66-int	LTR/ERV1	6339	6674	(2)	3056185
5815	13.2	19.9	0.3	chr5	1379680	1380686	(180157573)	C	LTR12D	LTR/ERV1	(0)	1254	1	3056197
1393	22.8	2.8	0.9	chr5	1380720	1381069	(180157190)	+	MLT1A0	LTR/ERVL-MaLR	3	359	(6)	3056198
2217	19.1	2.4	0.7	chr5	4718425	4718868	(176819391)	C	MER66A	LTR/ERV1	(0)	478	27	3059719
477	17.1	3.1	3.1	chr5	10546183	10546307	(170991952)	+	LTR37A	LTR/ERV1	1	125	(301)	3067108
1241	24.2	6.5	3.8	chr5	10546308	10546798	(170991461)	C	MLT1C	LTR/ERVL-MaLR	(0)	505	1	3067109
2931	16.3	0.0	1.6	chr5	15166398	15166890	(166371369)	+	MER66B	LTR/ERV1	1	485	(1)	3073248
1723	27.5	10.6	3.6	chr5	15166891	15166943	(166371316)	+	MLT1G1-int	LTR/ERVL-MaLR	1429	1464	(25)	3073247
1143	26.6	8.6	3.4	chr5	15166956	15167454	(166370805)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	3073247
479	22.8	0.0	2.6	chr5	15543908	15544024	(165994235)	+	MER66B	LTR/ERV1	1	114	(372)	3073710
1870	12.2	0.0	0.4	chr5	15544027	15544298	(165993961)	+	MER66B	LTR/ERV1	216	486	(0)	3073710
15	0.0	0.0	0.0	chr5	15544558	15544574	(165993685)	+	(AC)n	Simple_repeat	1	17	(0)	3073711
706	27.1	2.8	0.0	chr5	20336073	20336282	(161201977)	+	HUERS-P3-int	LTR/ERV1	8703	8918	(1)	3080543
3501	10.5	1.8	5.4	chr5	20336283	20336440	(161201819)	+	LTR77	LTR/ERV1	1	141	(481)	3080543
2330	19.0	1.2	2.6	chr5	22947537	22948029	(158590230)	+	MER66B	LTR/ERV1	1	486	(0)	3084112
1123	29.1	1.7	1.1	chr5	22948030	22948348	(158589911)	+	MLT1E	LTR/ERVL-MaLR	236	653	(0)	3084111
8100	8.7	1.9	1.4	chr5	37282818	37283587	(144254672)	C	THE1B-int	LTR/ERVL-MaLR	(297)	1283	497	3104154
1743	9.5	0.0	3.6	chr5	37283581	37283830	(144254429)	+	THE1-int	LTR/ERVL-MaLR	120	360	(1220)	3104156
869	10.1	0.0	0.0	chr5	37283828	37283946	(144254313)	C	THE1B-int	LTR/ERVL-MaLR	(1461)	119	1	3104154
2182	12.5	7.4	2.3	chr5	37283947	37283984	(144254275)	C	THE1B	LTR/ERVL-MaLR	(0)	364	325	3104154
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
19	23.3	1.4	5.4	chr5	40798198	40798270	(140739989)	+	G-rich	Low_complexity	1	74	(0)	3109434
2298	10.2	0.0	0.0	chr5	43064333	43064635	(138473624)	+	AluSx	SINE/Alu	2	304	(8)	3112477
1891	15.9	20.4	3.2	chr5	43064636	43064675	(138473584)	+	MER61D	LTR/ERV1	465	501	(0)	3112476
12	12.0	13.3	0.0	chr5	43065259	43065303	(138472956)	+	A-rich	Low_complexity	1	51	(0)	3112478
14	11.2	3.5	0.0	chr5	43121157	43121185	(138417074)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3112576
2335	14.6	3.7	15.6	chr5	43584134	43584684	(137953575)	+	MER66D	LTR/ERV1	2	484	(0)	3113302
269	30.0	4.8	1.0	chr5	43584713	43584813	(137953446)	+	MER66-int	LTR/ERV1	400	504	(6172)	3113303
2392	10.7	0.0	0.0	chr5	43584872	43585179	(137953080)	C	AluSg	SINE/Alu	(1)	309	2	3113304
13	8.7	0.0	14.0	chr5	56909853	56909902	(124628357)	+	G-rich	Low_complexity	1	50	(0)	3125753
180	21.1	18.3	3.8	chr5	61812840	61812918	(119725341)	C	MIR	SINE/MIR	(4)	258	166	3132824
2717	18.0	0.7	0.4	chr5	61812921	61813378	(119724881)	C	MER66A	LTR/ERV1	(2)	476	18	3132825
263	35.6	10.0	0.0	chr5	64595013	64595147	(116943112)	C	MIR1_Amn	SINE/MIR	(80)	150	1	3136621
2429	19.9	7.9	1.6	chr5	71884845	71885355	(109652904)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	3148201
3120	14.0	0.0	0.8	chr5	71885508	71885989	(109652270)	C	MER66A	LTR/ERV1	(0)	478	1	3148202
1823	15.1	19.0	4.4	chr5	75966392	75966849	(105571410)	+	MER66C	LTR/ERV1	1	541	(14)	3154306
269	33.7	10.6	1.0	chr5	75966855	75966956	(105571303)	+	MIRb	SINE/MIR	11	123	(145)	3154307
835	20.3	0.0	2.5	chr5	75967052	75967208	(105571051)	+	AluJb	SINE/Alu	1	153	(159)	3154308
233	24.5	0.0	0.0	chr5	76104331	76104383	(105433876)	+	L2a	LINE/L2	2019	2071	(1348)	3154504
1071	18.8	0.0	0.0	chr5	76104384	76104548	(105433711)	C	FAM	SINE/Alu	(20)	165	1	3154505
2873	14.5	1.3	0.4	chr5	77029653	77030099	(104508160)	+	MER72	LTR/ERV1	258	722	(0)	3156069
2445	16.6	5.4	0.7	chr5	77410067	77410521	(104127738)	C	MER66A	LTR/ERV1	(0)	478	1	3156648
665	28.2	4.1	12.4	chr5	77892937	77893405	(103644854)	+	MLT1J1	LTR/ERVL-MaLR	10	416	(28)	3157340
279	30.6	15.0	0.0	chr5	78294134	78294241	(103244018)	+	MER5B	DNA/hAT-Charlie	51	177	(1)	3157888
2101	11.5	0.0	2.9	chr5	80406957	80407268	(101130991)	C	AluJr	SINE/Alu	(9)	303	1	3161532
2022	6.6	1.5	5.9	chr5	80555655	80555941	(100982318)	C	AluY	SINE/Alu	(2)	309	36	3161796
220	36.6	11.4	0.0	chr5	82278829	82278921	(99259338)	+	MIR	SINE/MIR	2	106	(156)	3164384
12	9.1	7.7	4.8	chr5	84384811	84384849	(97153410)	+	G-rich	Low_complexity	1	42	(0)	3167185
15	17.6	6.7	0.0	chr5	84384898	84384942	(97153317)	+	(GCCC)n	Simple_repeat	1	48	(0)	3167186
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
1591	21.9	6.0	0.0	chr5	102100716	102101058	(79437201)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3189711
5708	27.2	3.8	1.1	chr5	102101059	102102187	(79436072)	C	L1M4b	LINE/L1	(5691)	1176	13	3189710
257	31.2	0.0	0.0	chr5	104001729	104001792	(77536467)	+	MIR	SINE/MIR	88	151	(111)	3192198
2467	18.9	5.6	0.8	chr5	104001802	104002298	(77535961)	C	MER66C	LTR/ERV1	(18)	537	16	3192199
2585	17.8	4.2	0.4	chr5	104380207	104380670	(77157589)	+	MER66B	LTR/ERV1	5	486	(0)	3192617
3148	24.1	2.9	4.8	chr5	104380671	104380705	(77157554)	+	L1MC3	LINE/L1	7451	7482	(478)	3192613
318	25.8	4.1	3.1	chr5	104380699	104380794	(77157465)	C	L1MC3	LINE/L1	(916)	6869	6773	3192618
21	4.2	0.0	0.0	chr5	104380832	104380856	(77157403)	+	(A)n	Simple_repeat	1	25	(0)	3192619
2103	14.8	0.0	0.0	chr5	104897814	104898118	(76640141)	+	AluSz	SINE/Alu	1	305	(7)	3193207
4338	12.6	1.4	2.4	chr5	106535043	106535532	(75002727)	C	L1PA13	LINE/L1	(19)	6144	5656	3195260
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
2422	18.5	6.8	0.9	chr5	109412849	109413377	(72124882)	+	L1M4	LINE/L1	3	564	(6953)	3198953
1893	18.8	7.6	8.8	chr5	109413379	109413926	(72124333)	C	MER66C	LTR/ERV1	(14)	541	1	3198954
20	30.0	3.5	0.0	chr5	109689790	109689874	(71848385)	+	(GCG)n	Simple_repeat	1	88	(0)	3199330
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
58	22.1	1.5	8.4	chr5	115296655	115296913	(66241346)	+	G-rich	Low_complexity	1	263	(0)	3206588
1647	22.2	10.7	6.2	chr5	120546733	120547247	(60991012)	C	MER66C	LTR/ERV1	(14)	541	1	3213662
2309	18.6	1.4	5.9	chr5	125605841	125606347	(55931912)	+	MER66B	LTR/ERV1	1	484	(2)	3220253
987	21.9	1.7	11.2	chr5	125606348	125606560	(55931699)	+	MLT2B3	LTR/ERVL	111	297	(257)	3220252
216	30.9	4.3	6.8	chr5	125606574	125606691	(55931568)	+	L2c	LINE/L2	3226	3340	(47)	3220254
13	23.2	3.9	1.9	chr5	127073502	127073553	(54464706)	+	(CGCCCCA)n	Simple_repeat	1	54	(0)	3222379
17	16.8	2.5	0.0	chr5	128965434	128965473	(52572786)	+	G-rich	Low_complexity	1	41	(0)	3224771
2429	14.9	6.0	1.1	chr5	130617397	130617858	(50920401)	+	MER66B	LTR/ERV1	1	486	(0)	3226767
3111	14.1	0.8	1.0	chr5	130617859	130618253	(50920006)	C	L1PA16	LINE/L1	(104)	6062	5668	3226766
2216	10.2	0.0	5.5	chr5	134478143	134478467	(47059792)	+	AluSc	SINE/Alu	2	308	(1)	3232652
699	13.5	0.0	0.0	chr5	134478468	134478571	(47059688)	+	MER66B	LTR/ERV1	383	486	(0)	3232650
1684	18.1	4.7	0.0	chr5	134478676	134478957	(47059302)	+	AluJr	SINE/Alu	1	296	(16)	3232653
2524	8.1	0.0	0.0	chr5	138222439	138222746	(43315513)	+	AluSc5	SINE/Alu	1	308	(1)	3238391
399	28.7	10.8	0.0	chr5	138223218	138223398	(43314861)	C	L2a	LINE/L2	(0)	3426	3224	3238392
2389	5.7	0.3	1.0	chr5	139563652	139563947	(41974312)	+	AluY	SINE/Alu	2	295	(16)	3241051
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
13	11.1	3.2	3.1	chr5	141758967	141758997	(39779262)	+	GA-rich	Low_complexity	1	32	(0)	3244547
588	27.3	1.1	7.5	chr5	149222156	149222341	(32315918)	C	MIRb	SINE/MIR	(0)	268	95	3257240
559	25.3	1.9	1.3	chr5	149222395	149222550	(32315709)	+	Charlie4z	DNA/hAT-Charlie	4	160	(7)	3257241
380	11.3	11.4	0.0	chr5	153986768	153986829	(27551430)	C	MER66C	LTR/ERV1	(14)	541	472	3266229
2808	12.5	12.9	1.4	chr5	153987081	153987568	(27550691)	C	MER66C	LTR/ERV1	(3)	552	1	3266230
1878	30.0	13.6	1.6	chr5	157466057	157467012	(24071247)	C	L2c	LINE/L2	(195)	3231	2165	3272726
17	16.9	2.9	0.0	chr5	158175381	158175414	(23362845)	+	(TG)n	Simple_repeat	1	35	(0)	3274158
299	33.1	4.1	6.8	chr5	158452280	158452603	(23085656)	C	UCON78	DNA	(0)	443	129	3274617
13	15.8	0.0	7.3	chr5	159095202	159095242	(22443017)	+	(CCCCTC)n	Simple_repeat	1	41	(0)	3275541
2845	18.0	1.1	0.0	chr5	163186045	163186517	(18351742)	+	MER66A	LTR/ERV1	1	478	(0)	3282123
20	16.4	0.0	0.0	chr5	163186717	163186750	(18351509)	+	A-rich	Low_complexity	1	34	(0)	3282124
301	26.6	10.1	2.0	chr5	163565219	163565364	(17972895)	+	MER102a	DNA/hAT-Charlie	46	204	(126)	3282754
2631	18.1	3.3	0.0	chr5	165410037	165410505	(16127754)	C	MER66B	LTR/ERV1	(0)	486	2	3285298
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
449	30.9	2.6	2.4	chr5	168679374	168679556	(12858703)	C	MIRb	SINE/MIR	(0)	262	87	3290559
266	26.7	9.6	0.0	chr5	168679778	168679852	(12858407)	+	MIRb	SINE/MIR	5	87	(181)	3290560
419	27.7	13.1	4.6	chr5	168679983	168680237	(12858022)	+	MER102c	DNA/hAT-Charlie	61	332	(9)	3290561
279	28.0	2.0	2.9	chr5	171858433	171858535	(9679724)	+	L2c	LINE/L2	3269	3370	(17)	3296186
240	18.5	6.9	0.0	chr5	173235854	173235907	(8302352)	C	MER91C	DNA/hAT-Tip100	(4)	136	79	3299239
12	8.4	0.0	6.9	chr5	173236063	173236091	(8302168)	+	(CCTC)n	Simple_repeat	1	29	(0)	3299240
307	27.5	8.2	2.3	chr5	174935649	174935819	(6602440)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	3302504
357	25.9	18.2	0.8	chr5	175573788	175574032	(5964227)	+	L2a	LINE/L2	2669	2965	(454)	3303664
221	35.6	10.4	2.1	chr5	175574070	175574307	(5963952)	+	L2a	LINE/L2	3075	3334	(92)	3303664
254	28.4	12.7	4.7	chr5	177429041	177429206	(4109053)	+	MIRb	SINE/MIR	22	203	(65)	3307408
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2354	8.3	0.0	1.0	chr5	179388635	179388935	(2149324)	+	AluY	SINE/Alu	1	298	(13)	3310750
2256	15.9	8.2	1.7	chr5	179394333	179394754	(2143505)	+	MER66A	LTR/ERV1	27	478	(0)	3310757
379	19.6	2.0	4.8	chr5	179394755	179394874	(2143385)	C	MLT1E	LTR/ERVL-MaLR	(513)	114	4	3310756
386	27.4	12.3	3.8	chr5	179394907	179395014	(2143245)	+	L1ME2	LINE/L1	5305	5428	(1136)	3310752
481	27.8	16.5	3.4	chr5	179870973	179871266	(1666993)	+	MLT1K	LTR/ERVL-MaLR	259	591	(4)	3311725
1808	19.0	3.7	15.5	chr6	968129	968682	(169837297)	+	MER66B	LTR/ERV1	1	486	(0)	3315453
248	28.9	3.7	0.0	chr6	968722	968825	(169837154)	+	HAL1	LINE/L1	991	1098	(1409)	3315452
1017	19.5	11.8	0.9	chr6	968827	969059	(169836920)	+	L1M4c	LINE/L1	3	264	(6120)	3315454
272	25.7	12.4	1.9	chr6	4792846	4793238	(166012741)	C	L1M5	LINE/L1	(1156)	4990	4563	3321076
207	30.3	42.7	6.8	chr6	4793239	4793416	(166012563)	C	L2a	LINE/L2	(59)	3367	3126	3321078
2316	25.7	7.8	3.3	chr6	6775862	6776075	(164029904)	C	HAL1	LINE/L1	(119)	2388	2193	3323890
2248	15.9	2.5	17.3	chr6	6776076	6776646	(164029333)	C	MER66D	LTR/ERV1	(0)	484	1	3323891
2779	15.7	4.1	1.3	chr6	7974163	7974634	(162831345)	C	MER66B	LTR/ERV1	(0)	486	1	3325976
2415	7.3	0.3	0.7	chr6	10693977	10694279	(160111700)	+	AluSp	SINE/Alu	1	302	(11)	3330012
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
2289	11.7	0.0	1.3	chr6	13751684	13751999	(157053980)	C	AluSz	SINE/Alu	(0)	312	1	3334829
786	18.8	10.2	0.7	chr6	13752077	13752226	(157053753)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3334830
460	8.8	0.0	0.0	chr6	13752243	13752299	(157053680)	+	AluSx	SINE/Alu	156	212	(100)	3334831
1892	19.1	3.5	9.2	chr6	13843456	13843561	(156962418)	+	MLT1C	LTR/ERVL-MaLR	124	203	(264)	3335023
1879	19.2	13.2	0.0	chr6	13843562	13843983	(156961996)	+	MER66B	LTR/ERV1	1	486	(0)	3335025
1892	19.1	3.5	9.2	chr6	13843984	13844250	(156961729)	+	MLT1C	LTR/ERVL-MaLR	204	467	(0)	3335023
17805	17.4	2.8	1.9	chr6	15641232	15646258	(155159721)	+	L1PA17	LINE/L1	343	5162	(1753)	3338194
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
15	5.6	0.0	0.0	chr6	15663182	15663200	(155142779)	+	(T)n	Simple_repeat	1	19	(0)	3338220
298	27.0	4.8	1.0	chr6	15663328	15663428	(155142551)	+	MIRc	SINE/MIR	53	157	(111)	3338221
2311	18.9	5.7	1.7	chr6	17524389	17524847	(153281132)	C	MER66A	LTR/ERV1	(0)	478	1	3341307
527	28.9	3.4	0.0	chr6	18892502	18892643	(151913336)	C	MER5A1	DNA/hAT-Charlie	(19)	147	1	3343724
2959	12.2	5.2	1.1	chr6	18892671	18893134	(151912845)	C	MER66D	LTR/ERV1	(0)	484	1	3343725
7764	16.9	11.4	0.8	chr6	20320049	20321457	(150484522)	+	LTR12C	LTR/ERV1	2	1579	(0)	3345812
13	12.7	2.6	5.1	chr6	25279351	25279388	(145526591)	+	(CCCCG)n	Simple_repeat	1	39	(0)	3353384
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
242	26.7	9.7	1.5	chr6	25993070	25993202	(144812777)	C	L1ME3Cz	LINE/L1	(16)	981	837	3354453
14	13.2	2.9	2.8	chr6	26156401	26156435	(144649544)	+	(CTGCCC)n	Simple_repeat	1	36	(0)	3354734
4810	13.4	10.5	4.0	chr6	26956056	26957143	(143848836)	C	LTR12E	LTR/ERV1	(155)	1167	1	3356080
302	20.0	5.8	0.0	chr6	27114377	27114441	(143691538)	C	MER66-int	LTR/ERV1	(6410)	266	198	3356315
428	25.0	17.4	5.0	chr6	27114533	27114692	(143691287)	C	MER66D	LTR/ERV1	(0)	484	301	3356315
267	21.1	7.8	1.4	chr6	27114686	27114757	(143691222)	C	MER66D	LTR/ERV1	(107)	377	301	3356316
269	20.6	5.2	1.4	chr6	27114751	27114824	(143691155)	C	MER66D	LTR/ERV1	(107)	377	301	3356316
303	18.3	10.1	0.0	chr6	27114816	27114886	(143691093)	C	MER66D	LTR/ERV1	(105)	379	301	3356316
2133	11.7	0.0	0.0	chr6	27678847	27679136	(143126843)	C	AluSq2	SINE/Alu	(22)	291	2	3357356
855	7.6	12.5	0.0	chr6	27679137	27679255	(143126724)	C	AluSx	SINE/Alu	(176)	136	1	3357357
1761	11.9	4.1	4.4	chr6	27679323	27679617	(143126362)	+	AluSq2	SINE/Alu	1	294	(19)	3357358
4870	13.8	7.8	6.9	chr6	28103324	28104519	(142701460)	+	LTR49-int	LTR/ERV1	3712	4918	(1413)	3358072
1485	26.5	9.8	3.1	chr6	28400212	28401574	(142404405)	+	L1MC5a	LINE/L1	7	444	(2333)	3358562
2251	6.5	5.5	0.3	chr6	28730297	28730590	(142075389)	+	AluSx1	SINE/Alu	1	310	(2)	3359113
2564	4.0	1.0	0.3	chr6	28895821	28896121	(141909858)	C	AluY	SINE/Alu	(6)	305	3	3359410
394	20.7	4.4	0.0	chr6	30098679	30098765	(140707214)	+	MLT1C	LTR/ERVL-MaLR	2	92	(375)	3361064
1708	14.9	0.0	7.5	chr6	30098768	30099075	(140706904)	+	AluJb	SINE/Alu	1	285	(27)	3361065
13	9.3	0.0	0.0	chr6	30258994	30259016	(140546963)	+	(AACA)n	Simple_repeat	1	23	(0)	3361346
1739	15.8	1.0	4.7	chr6	30672029	30672350	(140133629)	+	AluJb	SINE/Alu	1	310	(2)	3361999
316	15.2	12.0	1.5	chr6	30672367	30672433	(140133546)	+	MER5A1	DNA/hAT-Charlie	92	166	(0)	3362000
317	28.1	15.4	5.0	chr6	30673180	30673381	(140132598)	C	L2a	LINE/L2	(3)	3423	3197	3362001
280	30.7	0.0	1.1	chr6	30679007	30679095	(140126884)	+	MIR3	SINE/MIR	103	190	(18)	3362013
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
2172	18.2	5.0	11.6	chr6	32621488	32621979	(138184000)	C	MER66B	LTR/ERV1	(0)	486	29	3365154
210	28.6	16.7	0.0	chr6	32796832	32796936	(138009043)	C	MIR	SINE/MIR	(126)	136	11	3365425
926	24.9	3.5	2.7	chr6	32984254	32984509	(137821470)	C	MIR	SINE/MIR	(2)	260	3	3365700
525	27.8	8.2	2.4	chr6	35318903	35319096	(135486883)	+	MIRb	SINE/MIR	5	208	(60)	3370118
615	18.8	6.2	2.9	chr6	36547650	36547819	(134258160)	C	L1MC4a	LINE/L1	(0)	7882	7707	3372734
1760	27.1	6.7	2.3	chr6	37207620	37208528	(133597451)	C	L2a	LINE/L2	(1)	3425	2449	3374237
202	34.2	2.5	1.2	chr6	41035335	41035414	(129770565)	+	MIR3	SINE/MIR	13	93	(115)	3380521
2557	16.4	1.3	0.9	chr6	41035422	41035871	(129770108)	C	MER66A	LTR/ERV1	(0)	478	27	3380522
338	22.4	0.0	0.0	chr6	43706786	43706852	(127099127)	C	L1MC	LINE/L1	(2065)	5817	5751	3385867
243	26.6	1.5	0.0	chr6	43706866	43706929	(127099050)	+	LTR85c	LTR/Gypsy?	435	499	(324)	3385861
277	30.6	2.4	3.2	chr6	43706996	43707120	(127098859)	+	LTR85c	LTR/Gypsy?	679	802	(21)	3385861
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
236	42.7	1.4	1.4	chr6	47035027	47035171	(123770808)	C	MamRTE1	LINE/RTE-BovB	(382)	3430	3286	3391122
13	12.1	5.0	4.8	chr6	47134534	47134573	(123671406)	+	GA-rich	Low_complexity	1	42	(0)	3391286
323	20.4	19.9	1.7	chr6	47135061	47135175	(123670804)	+	L2a	LINE/L2	3270	3410	(16)	3391287
1385	16.2	16.9	5.6	chr6	71870709	71871067	(98934912)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3421145
2804	18.7	2.4	0.0	chr6	80976711	80977249	(89828730)	+	MER66C	LTR/ERV1	1	552	(3)	3433225
7911	22.4	9.3	3.5	chr6	80977472	80977644	(89828335)	+	MER66-int	LTR/ERV1	22	203	(6473)	3433225
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
16	6.4	2.6	7.5	chr6	85643496	85643534	(85162445)	+	(CCCCTC)n	Simple_repeat	1	40	(0)	3439345
20	24.0	2.4	4.6	chr6	85643596	85643680	(85162299)	+	(CCCCG)n	Simple_repeat	1	87	(0)	3439346
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
3497	13.1	0.0	2.0	chr6	88477197	88477750	(82328229)	C	MER66C	LTR/ERV1	(12)	543	1	3443172
2213	7.7	1.0	1.7	chr6	89820075	89820374	(80985605)	+	AluSz	SINE/Alu	1	298	(14)	3445427
2601	18.0	1.6	0.6	chr6	103454738	103455217	(67350762)	+	MER66B	LTR/ERV1	2	486	(0)	3462770
2214	19.2	2.5	2.9	chr6	103455365	103455880	(67350099)	+	L1MA7	LINE/L1	5778	6291	(0)	3462771
1254	9.5	0.0	0.0	chr6	110213381	110213538	(60592441)	C	AluYc	SINE/Alu	(3)	296	139	3473301
210	37.9	5.7	0.8	chr6	113426404	113426520	(57379459)	C	L2b	LINE/L2	(24)	3351	3229	3478462
384	32.6	5.2	0.0	chr6	113426570	113426698	(57379281)	C	MIRb	SINE/MIR	(10)	258	123	3478463
309	38.1	8.4	4.4	chr6	115543358	115543678	(55262301)	C	L2c	LINE/L2	(5)	3382	3048	3481420
22750	9.0	1.4	2.1	chr6	115544770	115551175	(55254804)	+	L1PA10	LINE/L1	4	6347	(6)	3481421
679	28.6	8.4	7.3	chr6	116533612	116534220	(54271759)	+	LTR41B	LTR/ERVL	1	747	(11)	3482692
2478	7.7	0.0	1.9	chr6	116680369	116680680	(54125299)	+	AluSc	SINE/Alu	1	306	(3)	3482932
216	31.4	0.0	8.2	chr6	116680803	116680875	(54125104)	+	L2a	LINE/L2	3322	3388	(38)	3482933
14	22.6	2.4	0.0	chr6	116680890	116680930	(54125049)	+	(GAAT)n	Simple_repeat	1	42	(0)	3482934
37	0.0	0.0	0.0	chr6	116681112	116681145	(54124834)	+	(CCG)n	Simple_repeat	1	34	(0)	3482935
13	16.9	4.8	2.3	chr6	116681759	116681800	(54124179)	+	(CCTCCTC)n	Simple_repeat	1	44	(0)	3482936
21	12.2	0.0	0.0	chr6	117482175	117482210	(53323769)	+	(TGAA)n	Simple_repeat	1	36	(0)	3483949
11	18.8	4.3	4.2	chr6	117482790	117482835	(53323144)	+	(CGGCGG)n	Simple_repeat	1	48	(0)	3483950
23	25.6	3.5	1.1	chr6	117482937	117483021	(53322958)	+	G-rich	Low_complexity	1	88	(0)	3483951
2480	16.1	2.7	1.9	chr6	118031530	118032011	(52773968)	C	MER66B	LTR/ERV1	(0)	486	1	3484633
38427	12.9	2.3	0.9	chr6	118580330	118588950	(52217029)	+	HUERS-P3-int	LTR/ERV1	1	8907	(12)	3485361
12467	11.1	1.4	0.0	chr6	119082302	119083909	(51722070)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	3486089
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2676	16.1	6.8	0.2	chr6	122060677	122061130	(48744849)	C	MER66B	LTR/ERV1	(0)	486	1	3489925
2752	18.7	0.6	0.4	chr6	122584802	122585285	(48220694)	+	MER66B	LTR/ERV1	1	485	(1)	3490592
14	18.5	0.0	0.0	chr6	122996244	122996274	(47809705)	+	(CAG)n	Simple_repeat	1	31	(0)	3491135
16	21.4	0.0	0.0	chr6	122996654	122996691	(47809288)	+	(GCC)n	Simple_repeat	1	38	(0)	3491136
11174	10.5	1.1	0.6	chr6	124569781	124571352	(46234627)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3493179
267	31.8	1.1	0.0	chr6	125986855	125986942	(44819037)	C	L2c	LINE/L2	(38)	3349	3261	3495121
504	27.3	8.8	10.0	chr6	125987044	125987352	(44818627)	C	L2c	LINE/L2	(1)	3386	3082	3495122
470	35.1	14.8	3.0	chr6	125987369	125988463	(44817516)	C	L2c	LINE/L2	(413)	3006	1761	3495122
400	17.6	0.0	0.0	chr6	127160106	127160179	(43645800)	C	MADE2	DNA/TcMar-Mariner	(4)	76	3	3496514
2876	17.3	0.0	0.4	chr6	127160353	127160829	(43645150)	C	MER66B	LTR/ERV1	(2)	484	10	3496515
12	24.8	0.0	5.7	chr6	133241192	133241244	(37564735)	+	(CCCCCGG)n	Simple_repeat	1	53	(0)	3504977
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
11	21.2	6.8	0.0	chr6	134175662	134175705	(36630274)	+	G-rich	Low_complexity	1	47	(0)	3506325
23	15.9	2.0	0.0	chr6	136018748	136018796	(34787183)	+	(TATATA)n	Simple_repeat	1	50	(0)	3509258
18	4.7	0.0	0.0	chr6	136018798	136018819	(34787160)	+	(GT)n	Simple_repeat	1	22	(0)	3509259
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
16	3.5	3.0	5.9	chr6	138161876	138161908	(32644071)	+	(GGCGG)n	Simple_repeat	1	34	(0)	3512561
2503	17.3	6.0	1.3	chr6	141908128	141908590	(28897389)	C	MER66B	LTR/ERV1	(0)	486	1	3517856
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
15	21.8	2.9	0.0	chr6	144216902	144216935	(26589044)	+	(TC)n	Simple_repeat	1	35	(0)	3521046
223	27.2	15.6	2.6	chr6	145815054	145815170	(24990809)	C	MIR3	SINE/MIR	(60)	148	14	3523215
207	29.4	14.4	4.0	chr6	146598586	146598734	(24207245)	+	L3	LINE/CR1	3681	3847	(252)	3524256
843	29.4	5.8	13.8	chr6	149178682	149179269	(21626710)	+	MamGypLTR3a	LTR/Gypsy	434	971	(10)	3528022
2559	19.6	5.2	4.4	chr6	149613540	149613758	(21192221)	+	L1M4c	LINE/L1	1	223	(6161)	3528776
1570	19.4	10.9	0.8	chr6	149613759	149614121	(21191858)	+	MLT1A1	LTR/ERVL-MaLR	1	404	(4)	3528777
2559	19.6	5.2	4.4	chr6	149614122	149614472	(21191507)	+	L1M4c	LINE/L1	224	576	(5808)	3528776
2433	14.4	2.4	0.0	chr6	150413699	150414064	(20391915)	C	MER66A	LTR/ERV1	(0)	478	104	3530177
18	3.8	0.0	3.5	chr6	151665599	151665627	(19140352)	+	(TTCTT)n	Simple_repeat	1	29	(0)	3532430
543	33.3	4.4	0.0	chr6	152095020	152095235	(18710744)	+	L2	LINE/L2	2654	2879	(540)	3533039
235	27.0	5.2	8.6	chr6	152095367	152095543	(18710436)	C	MLT1K	LTR/ERVL-MaLR	(98)	451	225	3533034
2414	18.7	2.3	2.1	chr6	153878123	153878607	(16927372)	C	MER66B	LTR/ERV1	(0)	486	1	3535505
382	23.8	11.8	7.5	chr6	155314942	155315144	(15490835)	+	MIRb	SINE/MIR	53	268	(0)	3537959
2677	19.1	0.6	0.6	chr6	159831892	159832377	(10973602)	+	MER66B	LTR/ERV1	1	486	(0)	3544668
889	12.7	0.0	0.0	chr6	159832588	159832705	(10973274)	+	FLAM_C	SINE/Alu	5	122	(21)	3544669
799	18.5	1.8	6.4	chr6	160252635	160252807	(10553172)	+	MER5A1	DNA/hAT-Charlie	2	166	(0)	3545237
373	29.5	0.8	3.0	chr6	160252810	160252942	(10553037)	+	MIRb	SINE/MIR	111	240	(28)	3545238
2653	15.2	1.2	10.3	chr6	160253023	160253557	(10552422)	C	MER66B	LTR/ERV1	(0)	486	1	3545239
2482	13.1	2.4	0.8	chr6	160520332	160520822	(10285157)	C	LTR12E	LTR/ERV1	(823)	499	1	3545512
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
2043	17.8	2.5	3.2	chr6	161986027	161986426	(8819553)	+	MER66B	LTR/ERV1	90	486	(0)	3547526
16	0.0	0.0	0.0	chr6	161986492	161986508	(8819471)	+	(T)n	Simple_repeat	1	17	(0)	3547527
2128	19.6	9.9	0.5	chr6	162108838	162109277	(8696702)	C	MER66B	LTR/ERV1	(0)	486	1	3547685
11578	9.9	1.3	0.0	chr6	165235866	165237424	(5568555)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3551712
15	4.8	0.0	0.0	chr6	165309246	165309267	(5496712)	+	(CCT)n	Simple_repeat	1	22	(0)	3551810
1121	21.8	10.2	3.7	chr6	165309814	165310113	(5495866)	+	MER2	DNA/TcMar-Tigger	1	322	(23)	3551811
2336	9.4	4.2	1.4	chr6	165751858	165752154	(5053825)	+	AluY	SINE/Alu	1	306	(5)	3552341
3214	12.2	7.2	2.7	chr6	165752155	165752367	(5053612)	+	MER66C	LTR/ERV1	328	541	(14)	3552340
226	37.7	3.2	0.0	chr6	165752382	165752503	(5053476)	+	MLT1F2	LTR/ERVL-MaLR	414	539	(21)	3552339
256	17.1	0.0	0.0	chr6	166067696	166067736	(4738243)	+	MER66D	LTR/ERV1	316	356	(128)	3552746
965	15.3	4.8	0.0	chr6	166067762	166067918	(4738061)	+	MER66D	LTR/ERV1	316	480	(4)	3552746
275	28.6	8.7	2.0	chr6	166067949	166068098	(4737881)	+	LTR82B	LTR/ERVL	560	720	(110)	3552747
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
4783	14.5	4.5	4.1	chr6	169320905	169321182	(1484797)	+	MER4D1	LTR/ERV1	619	900	(0)	3556343
243	20.3	1.7	1.7	chr6	169321186	169321245	(1484734)	C	MLT1A0	LTR/ERVL-MaLR	(17)	525	466	3556345
381	20.5	10.9	4.5	chr6	169321650	169321828	(1484151)	+	LTR16	LTR/ERVL	40	231	(207)	3556346
2221	16.3	6.4	9.4	chr6	169579430	169579929	(1226050)	+	MER66D	LTR/ERV1	1	484	(0)	3556614
1892	19.6	4.6	2.2	chr7	402108	402556	(158943417)	+	MER66B	LTR/ERV1	27	486	(0)	3558296
14	7.4	6.9	0.0	chr7	816429	816457	(158529516)	+	(CCCT)n	Simple_repeat	1	31	(0)	3558954
1051	25.6	9.9	3.8	chr7	1402066	1402538	(157943435)	+	MLT1G1	LTR/ERVL-MaLR	7	475	(14)	3559849
43	19.6	2.0	1.0	chr7	1670094	1670194	(157675779)	+	GA-rich	Low_complexity	1	103	(0)	3560288
2283	8.9	0.0	0.0	chr7	1782036	1782338	(157563635)	+	AluSx1	SINE/Alu	5	307	(5)	3560483
1818	20.9	6.7	4.7	chr7	1782339	1782564	(157563409)	+	MER66A	LTR/ERV1	253	478	(0)	3560482
775	30.6	2.8	2.1	chr7	1782566	1782986	(157562987)	C	L1ME3E	LINE/L1	(2379)	3767	3344	3560472
1458	18.5	0.3	6.9	chr7	2555962	2556106	(156789867)	+	AluJb	SINE/Alu	7	133	(179)	3561629
2213	8.3	0.0	5.1	chr7	2556107	2556420	(156789553)	+	AluSg	SINE/Alu	1	298	(12)	3561630
676	13.9	5.6	0.0	chr7	4401121	4401221	(154944752)	+	MER77	LTR/ERVL	1	107	(497)	3564735
1378	13.0	11.2	0.0	chr7	4401227	4401457	(154944516)	C	MER66C	LTR/ERV1	(18)	537	278	3564736
907	16.4	0.0	10.5	chr7	4401456	4401646	(154944327)	C	MER66C	LTR/ERV1	(384)	171	1	3564736
2505	4.7	0.7	0.0	chr7	5085749	5086044	(154259929)	+	AluY	SINE/Alu	1	298	(13)	3566196
2539	4.2	0.3	2.6	chr7	6104073	6104380	(153241593)	C	AluSx3	SINE/Alu	(10)	301	1	3568622
1421	16.9	1.0	10.8	chr7	6104381	6104411	(153241562)	+	AluJo	SINE/Alu	271	300	(12)	3568621
2692	19.0	1.2	0.6	chr7	12464424	12464906	(146881067)	+	MER66B	LTR/ERV1	1	486	(0)	3577395
5524	15.4	2.2	2.2	chr7	12464907	12465314	(146880659)	C	L1PB3	LINE/L1	(1402)	4744	4338	3577394
5914	14.6	1.7	0.9	chr7	13435696	13436862	(145909111)	C	L1MA4	LINE/L1	(14)	6286	5104	3578755
2860	17.2	0.2	0.2	chr7	13436863	13437340	(145908633)	C	MER66A	LTR/ERV1	(0)	478	1	3578756
9881	13.4	3.2	4.2	chr7	15052208	15052686	(144293287)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1151	3580782
2233	14.0	0.0	0.6	chr7	15052687	15053000	(144292973)	C	AluSx1	SINE/Alu	(0)	312	1	3580783
187	27.5	2.8	2.8	chr7	16420560	16420630	(142925343)	+	L2b	LINE/L2	3287	3357	(18)	3582434
807	28.7	6.8	7.0	chr7	21876490	21876935	(137469038)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	66	3589857
2051	15.2	5.4	2.5	chr7	21992264	21992655	(137353318)	+	L1MB2	LINE/L1	5702	6105	(66)	3590030
1592	16.3	4.3	0.3	chr7	21992656	21992945	(137353028)	+	MER66B	LTR/ERV1	185	486	(0)	3590031
577	23.6	0.0	1.4	chr7	21992946	21993075	(137352898)	+	MER92D	LTR/ERV1	193	320	(0)	3590032
3368	18.4	8.2	3.6	chr7	21993077	21993800	(137352173)	+	MER92-int	LTR/ERV1	3	766	(4452)	3590032
282	24.1	10.4	5.1	chr7	23598095	23598212	(135747761)	+	MIRb	SINE/MIR	16	147	(121)	3592698
16	10.0	0.0	0.0	chr7	27921336	27921357	(131424616)	+	(T)n	Simple_repeat	1	22	(0)	3599241
20	27.1	0.0	0.0	chr7	28854656	28854705	(130491268)	+	(AC)n	Simple_repeat	1	50	(0)	3600671
2429	8.5	0.0	0.7	chr7	29089858	29090162	(130255811)	C	AluSp	SINE/Alu	(10)	303	1	3601014
2250	18.3	5.2	3.0	chr7	29090163	29090238	(130255735)	+	MER66B	LTR/ERV1	410	483	(3)	3601013
17	25.6	3.9	4.4	chr7	29588664	29588785	(129757188)	+	GA-rich	Low_complexity	1	121	(0)	3601816
28	23.6	0.0	0.0	chr7	29589428	29589487	(129756486)	+	(T)n	Simple_repeat	1	60	(0)	3601817
294	26.0	0.0	0.0	chr7	31357574	31357650	(127988323)	C	Zaphod3	DNA/hAT-Tip100	(2438)	185	109	3604537
323	37.4	1.9	0.6	chr7	31357752	31357910	(127988063)	C	L2	LINE/L2	(422)	2997	2837	3604542
534	21.3	7.5	0.0	chr7	31358014	31358149	(127987824)	C	MER96	DNA/hAT-Tip100	(0)	175	29	3604543
2266	9.5	3.0	0.7	chr7	32210934	32211229	(127134744)	+	AluSq2	SINE/Alu	1	303	(10)	3605815
3182	8.4	0.7	0.5	chr7	32696970	32697400	(126648573)	C	L1PA10	LINE/L1	(8)	6160	5729	3606648
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
15	23.3	0.0	0.0	chr7	32957415	32957454	(126388519)	+	(GCGG)n	Simple_repeat	1	40	(0)	3607084
14	22.9	0.0	6.9	chr7	32957516	32957573	(126388400)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3607085
518	27.6	12.9	2.8	chr7	32958260	32958475	(126387498)	C	MIR	SINE/MIR	(10)	252	12	3607086
16	12.1	0.0	0.0	chr7	35536893	35536920	(123809053)	+	(ATGA)n	Simple_repeat	1	28	(0)	3610806
16	20.3	0.0	0.0	chr7	35537285	35537326	(123808647)	+	G-rich	Low_complexity	1	42	(0)	3610807
13	7.5	7.1	0.0	chr7	38909068	38909095	(120436878)	+	(CTCCA)n	Simple_repeat	1	30	(0)	3615797
710	25.1	14.3	0.0	chr7	38909424	38909626	(120436347)	C	MIRb	SINE/MIR	(10)	258	22	3615798
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
788	4.4	0.0	0.0	chr7	39949005	39949095	(119396878)	+	AluSp	SINE/Alu	213	303	(10)	3617483
15	0.0	0.0	0.0	chr7	39949858	39949876	(119396097)	+	(GGC)n	Simple_repeat	1	19	(0)	3617484
13	27.2	3.4	5.5	chr7	39949956	39950043	(119395930)	+	(CCCAG)n	Simple_repeat	1	91	(0)	3617485
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
2577	15.7	2.7	4.8	chr7	40828943	40829262	(118516711)	+	MER66D	LTR/ERV1	1	302	(182)	3619010
28	0.0	0.0	0.0	chr7	40829263	40829288	(118516685)	+	(CTG)n	Simple_repeat	1	26	(0)	3619011
2577	15.7	2.7	4.8	chr7	40829289	40829462	(118516511)	+	MER66D	LTR/ERV1	303	483	(1)	3619010
289	12.1	14.9	3.2	chr7	40829466	40829559	(118516414)	+	L1ME3Cz	LINE/L1	884	990	(7)	3619012
13	24.0	1.9	3.7	chr7	44082775	44082827	(115263146)	+	(GGCGG)n	Simple_repeat	1	54	(0)	3623779
347	28.4	11.1	2.5	chr7	44083067	44083304	(115262669)	+	L1ME4a	LINE/L1	4897	5157	(989)	3623780
12	27.3	2.2	0.0	chr7	44582356	44582400	(114763573)	+	(CCGCCCC)n	Simple_repeat	1	46	(0)	3624448
50	22.4	4.0	6.6	chr7	44885267	44885513	(114460460)	+	(CGC)n	Simple_repeat	1	257	(0)	3625085
188	28.8	19.3	0.9	chr7	44885920	44886147	(114459826)	C	L2b	LINE/L2	(180)	3195	2916	3625086
250	35.8	4.1	3.5	chr7	45109518	45109688	(114236285)	+	MER5B	DNA/hAT-Charlie	5	176	(2)	3625491
2334	9.4	2.0	0.0	chr7	45109695	45109991	(114235982)	+	AluSz	SINE/Alu	1	303	(9)	3625492
1817	20.8	5.9	3.6	chr7	48976149	48976597	(110369376)	C	MER66B	LTR/ERV1	(0)	486	27	3630555
1807	22.6	10.0	2.8	chr7	49341916	49342416	(110003557)	+	MER66C	LTR/ERV1	1	541	(14)	3631017
889	22.9	1.1	0.0	chr7	52101178	52101356	(107244617)	+	MLT1A0	LTR/ERVL-MaLR	1	181	(227)	3634468
601	17.0	0.9	0.0	chr7	52101357	52101462	(107244511)	C	MER66B	LTR/ERV1	(0)	486	380	3634469
7101	6.9	1.2	0.1	chr7	52101463	52102421	(107243552)	C	L1PA5	LINE/L1	(4245)	1910	941	3634470
15	13.7	0.0	0.0	chr7	55365243	55365266	(103980707)	+	(A)n	Simple_repeat	1	24	(0)	3638525
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
2023	13.8	1.4	0.0	chr7	56003218	56003507	(103342466)	+	AluSx	SINE/Alu	1	294	(18)	3639684
2523	5.4	0.0	0.3	chr7	56034521	56034815	(103311158)	C	AluY	SINE/Alu	(17)	294	1	3639769
347	18.2	0.0	0.0	chr7	57495188	57495242	(101850731)	+	AluYj4	SINE/Alu	225	279	(32)	3642545
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2178	14.7	0.6	0.8	chr7	64562251	64562607	(94783366)	+	MER57E3	LTR/ERV1	132	487	(0)	3646433
916	23.2	8.1	0.0	chr7	64563485	64563768	(94782205)	C	MER33	DNA/hAT-Charlie	(15)	309	1	3646434
938	23.1	8.7	0.3	chr7	65006936	65007218	(94338755)	C	MER33	DNA/hAT-Charlie	(15)	309	1	3647047
1673	16.6	0.3	5.4	chr7	66184467	66184652	(93161321)	+	AluJr	SINE/Alu	128	298	(14)	3649458
887	31.5	3.2	4.3	chr7	66184741	66185088	(93160885)	C	LTR78	LTR/ERV1	(395)	909	566	3649460
657	26.1	0.0	3.8	chr7	67596643	67596667	(91749306)	+	MER63A	DNA/hAT-Blackjack	3	27	(183)	3652599
3038	16.3	0.0	0.6	chr7	67596668	67597156	(91748817)	C	MER66B	LTR/ERV1	(0)	486	1	3652600
2306	10.6	0.3	0.0	chr7	68415713	68416014	(90929959)	+	AluSp	SINE/Alu	1	303	(10)	3654428
2033	17.0	12.8	3.0	chr7	68416015	68416235	(90929738)	+	MER66B	LTR/ERV1	260	486	(0)	3654427
2627	13.0	1.9	2.2	chr7	68416236	68416497	(90929476)	C	LTR72	LTR/ERV1	(252)	267	4	3654426
31	2.2	4.0	3.9	chr7	69598310	69598359	(89747614)	+	(CGAG)n	Simple_repeat	1	52	(0)	3657061
12	21.7	0.0	2.9	chr7	69598809	69598843	(89747130)	+	(TCTCC)n	Simple_repeat	1	35	(0)	3657062
14	19.8	0.0	2.7	chr7	69598883	69598919	(89747054)	+	(TCC)n	Simple_repeat	1	37	(0)	3657063
2466	9.9	0.0	0.0	chr7	72331068	72331379	(87014594)	+	AluSx1	SINE/Alu	1	312	(0)	3662101
734	12.5	0.9	0.0	chr7	72331512	72331623	(87014350)	C	MER66B	LTR/ERV1	(13)	542	430	3662102
16	13.9	0.0	2.9	chr7	72331639	72331672	(87014301)	+	(TATT)n	Simple_repeat	1	34	(0)	3662103
3365	9.6	1.1	0.0	chr7	72331686	72332145	(87013828)	C	L1PA11	LINE/L1	(0)	6174	5710	3662104
2923	11.1	10.0	0.0	chr7	72632933	72633419	(86712554)	+	MER66C	LTR/ERV1	1	541	(14)	3662758
816	24.6	8.0	2.9	chr7	72633539	72633848	(86712125)	C	L1ME3	LINE/L1	(123)	6039	5713	3662759
2099	8.4	0.7	0.0	chr7	73522992	73523266	(85822707)	C	AluSp	SINE/Alu	(1)	312	36	3664805
368	30.4	1.7	0.9	chr7	74994348	74994463	(84351510)	+	MIRb	SINE/MIR	77	193	(75)	3668549
1796	15.5	5.2	0.7	chr7	75739994	75740290	(83605683)	C	AluJr	SINE/Alu	(0)	312	2	3670392
905	21.4	7.4	5.8	chr7	77728122	77728468	(81617505)	C	HAL1	LINE/L1	(716)	1791	1439	3674376
1903	23.6	8.3	0.0	chr7	77728487	77728994	(81616979)	C	L1M3f	LINE/L1	(4758)	570	17	3674377
352	25.0	13.3	1.4	chr7	77729015	77729225	(81616748)	C	L1MEd	LINE/L1	(5603)	1483	1244	3674378
11	17.7	5.0	2.4	chr7	87627737	87627776	(71718197)	+	(CCGGACT)n	Simple_repeat	1	42	(0)	3687476
48	0.0	0.0	0.0	chr7	87628585	87628625	(71717348)	+	(GT)n	Simple_repeat	1	41	(0)	3687477
14	9.3	0.0	0.0	chr7	87628861	87628883	(71717090)	+	(GCG)n	Simple_repeat	1	23	(0)	3687478
272	27.0	12.6	5.1	chr7	94371190	94371306	(64974667)	+	MIR3	SINE/MIR	4	130	(78)	3696527
228	32.3	9.2	0.0	chr7	94371357	94371455	(64974518)	+	MIR3	SINE/MIR	85	193	(15)	3696528
1887	14.3	0.6	7.8	chr7	94371609	94371977	(64973996)	+	MLT1B	LTR/ERVL-MaLR	1	342	(48)	3696529
594	32.9	8.3	4.8	chr7	98070997	98071353	(61274620)	+	LTR33	LTR/ERVL	1	371	(144)	3701857
639	12.0	1.1	0.0	chr7	98071438	98071529	(61274444)	C	MER66B	LTR/ERV1	(0)	486	394	3701858
43	0.0	0.0	0.0	chr7	98071532	98071570	(61274403)	+	(TTA)n	Simple_repeat	1	39	(0)	3701859
1909	12.4	0.0	2.6	chr7	98071571	98071843	(61274130)	C	AluSx	SINE/Alu	(46)	266	1	3701860
2205	19.8	7.1	0.7	chr7	98553224	98553670	(60792303)	+	MER66A	LTR/ERV1	1	478	(0)	3702867
1561	14.9	8.7	3.4	chr7	99616160	99616454	(59729519)	+	AluJr	SINE/Alu	1	312	(0)	3705100
218	12.8	0.0	0.0	chr7	99616469	99616507	(59729466)	+	L2c	LINE/L2	3122	3160	(227)	3705101
12	14.4	0.0	0.0	chr7	99616509	99616532	(59729441)	+	(ACAC)n	Simple_repeat	1	24	(0)	3705102
2374	8.1	1.0	0.0	chr7	100427419	100427715	(58918258)	+	AluSx1	SINE/Alu	2	301	(11)	3706564
12	23.3	2.3	2.3	chr7	100427868	100427910	(58918063)	+	(TCCC)n	Simple_repeat	1	44	(0)	3706565
13	24.6	5.1	1.6	chr7	100827218	100827276	(58518697)	+	G-rich	Low_complexity	1	62	(0)	3707461
34	30.9	0.0	4.5	chr7	100827418	100827572	(58518401)	+	G-rich	Low_complexity	1	155	(0)	3707462
11	21.9	0.0	2.5	chr7	100828249	100828259	(58517714)	+	G-rich	Low_complexity	1	11	(0)	3707463
2415	6.0	0.0	4.1	chr7	100828260	100828575	(58517398)	+	AluSz	SINE/Alu	4	306	(6)	3707464
959	25.1	5.2	7.1	chr7	101367968	101368321	(57977652)	C	L1MC5	LINE/L1	(438)	8866	8526	3708627
2981	14.9	1.6	0.6	chr7	101368322	101368801	(57977172)	C	MER66B	LTR/ERV1	(1)	485	1	3708628
2425	18.8	1.4	10.3	chr7	101407618	101408151	(57937822)	+	MER66B	LTR/ERV1	1	486	(0)	3708734
1182	27.7	8.9	1.2	chr7	101408152	101408545	(57937428)	C	LTR16A	LTR/ERVL	(21)	430	1	3708733
2170	19.9	3.7	0.4	chr7	101559194	101559662	(57786311)	C	MER66B	LTR/ERV1	(0)	486	2	3709115
2369	9.2	0.0	0.3	chr7	104944640	104944944	(54401029)	C	AluSx1	SINE/Alu	(8)	304	1	3714874
288	32.3	5.8	0.0	chr7	104945439	104945568	(54400405)	C	MIR3	SINE/MIR	(20)	188	51	3714875
12	23.8	1.8	5.4	chr7	105387935	105387989	(53957984)	+	(CCCGCG)n	Simple_repeat	1	56	(0)	3715693
14	20.2	4.3	2.0	chr7	105388347	105388393	(53957580)	+	(CGCC)n	Simple_repeat	1	49	(0)	3715694
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
484	27.9	15.5	1.6	chr7	106177036	106177224	(53168749)	C	MIRb	SINE/MIR	(10)	258	39	3717231
11	27.8	0.0	3.9	chr7	108002594	108002644	(51343329)	+	G-rich	Low_complexity	1	51	(0)	3719946
26	10.3	7.6	2.8	chr7	108526347	108526412	(50819561)	+	(CGTG)n	Simple_repeat	1	71	(0)	3720664
3000	12.5	9.5	0.4	chr7	110850169	110850657	(48495316)	+	MER66C	LTR/ERV1	4	541	(14)	3723543
18	7.8	0.0	0.0	chr7	114922577	114922603	(44423370)	+	(GGA)n	Simple_repeat	1	27	(0)	3729032
16	18.4	3.8	3.6	chr7	114922984	114923049	(44422924)	+	(GCGGC)n	Simple_repeat	1	66	(0)	3729033
2486	17.1	4.2	0.9	chr7	115121159	115121624	(44224349)	+	MER66B	LTR/ERV1	5	486	(0)	3729289
14	21.9	2.0	3.9	chr7	116716839	116716889	(42629084)	+	(TGGC)n	Simple_repeat	1	52	(0)	3731460
22	8.4	0.0	4.8	chr7	120857358	120857401	(38488572)	+	(GGGGCG)n	Simple_repeat	1	41	(0)	3736915
14	12.5	0.0	0.0	chr7	120857964	120857989	(38487984)	+	(CCG)n	Simple_repeat	1	26	(0)	3736916
18	4.8	0.0	0.0	chr7	120857994	120858015	(38487958)	+	(A)n	Simple_repeat	1	22	(0)	3736917
266	28.4	15.6	4.7	chr7	123967795	123968027	(35377946)	C	L2	LINE/L2	(586)	2833	2571	3741208
1910	20.6	6.0	0.7	chr7	123968036	123968460	(35377513)	C	MER66A	LTR/ERV1	(3)	475	27	3741209
14	15.9	0.0	0.0	chr7	124765942	124765969	(34580004)	+	(CCT)n	Simple_repeat	1	28	(0)	3742264
16	7.4	0.0	6.1	chr7	124766199	124766231	(34579742)	+	(GGGTGG)n	Simple_repeat	1	33	(0)	3742265
334	34.4	3.0	1.5	chr7	128476269	128476398	(30869575)	C	Tigger19b	DNA/TcMar-Tigger	(178)	372	241	3747318
412	31.2	13.5	2.4	chr7	128738496	128738869	(30607104)	C	L2c	LINE/L2	(48)	3339	2918	3747900
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
13	28.8	0.0	1.9	chr7	130668500	130668551	(28677422)	+	(CCGGCC)n	Simple_repeat	1	52	(0)	3751445
202	34.3	6.2	1.9	chr7	131105463	131105569	(28240404)	C	MER5B	DNA/hAT-Charlie	(49)	129	18	3752132
3245	23.8	3.8	3.1	chr7	131785422	131785972	(27560001)	C	L1ME3	LINE/L1	(2)	6160	5621	3753459
1861	18.5	0.6	21.4	chr7	131785973	131786584	(27559389)	C	MER66D	LTR/ERV1	(0)	484	1	3753460
2577	14.4	4.3	3.1	chr7	131904816	131905295	(27440678)	+	MER66B	LTR/ERV1	1	486	(0)	3753661
260	32.9	8.1	0.9	chr7	134327745	134327974	(25017999)	C	Tigger15a	DNA/TcMar-Tigger	(0)	715	468	3757302
374	29.9	5.7	12.2	chr7	134328033	134328295	(25017678)	+	L2b	LINE/L2	3131	3375	(0)	3757303
1040	19.0	2.9	1.0	chr7	137356252	137356458	(21989515)	C	MER66C	LTR/ERV1	(12)	543	333	3761856
25	7.3	4.7	0.0	chr7	137356459	137356501	(21989472)	+	(TATTT)n	Simple_repeat	1	45	(0)	3761857
9565	10.7	4.3	0.9	chr7	137356504	137358562	(21987411)	C	L1PA3	LINE/L1	(3)	6152	4019	3761858
2262	26.4	7.4	8.0	chr7	137363304	137364189	(21981784)	C	MER66-int	LTR/ERV1	(5794)	882	3	3761860
1963	20.4	10.5	4.5	chr7	137364191	137364607	(21981366)	C	MER66C	LTR/ERV1	(12)	543	93	3761860
11259	10.2	1.8	0.1	chr7	137831667	137833220	(21512753)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3762462
601	17.2	12.9	6.1	chr7	138096276	138096579	(21249394)	C	MSTD	LTR/ERVL-MaLR	(26)	370	1	3762881
1234	27.6	14.1	3.3	chr7	138096593	138097258	(21248715)	+	L2	LINE/L2	1981	2730	(689)	3762882
49084	15.0	2.7	1.4	chr7	138557290	138565603	(20780370)	C	HERV3-int	LTR/ERV1	(0)	8426	1	3763836
2212	16.1	13.3	5.1	chr7	138565605	138566149	(20779824)	C	LTR4	LTR/ERV1	(0)	596	1	3763836
52	0.0	0.0	0.0	chr7	143902554	143902600	(15443373)	+	(CCCCT)n	Simple_repeat	1	47	(0)	3772464
1852	11.4	3.4	0.8	chr7	143902607	143902868	(15443105)	C	AluJb	SINE/Alu	(35)	277	9	3772465
2060	3.2	0.0	0.8	chr7	144255822	144256073	(15089900)	+	L1PA2	LINE/L1	5906	6155	(0)	3772957
2523	17.4	1.9	1.6	chr7	147959383	147959867	(11386106)	C	MER66B	LTR/ERV1	(0)	486	1	3777993
2325	8.3	1.6	1.9	chr7	148986497	148986809	(10359164)	+	AluSz	SINE/Alu	1	312	(0)	3779770
15	13.9	0.0	0.0	chr7	149626156	149626179	(9719794)	+	(T)n	Simple_repeat	1	24	(0)	3780953
627	4.1	0.0	0.0	chr7	149691180	149691252	(9654721)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	3781036
1626	14.1	5.6	11.4	chr7	149713156	149713516	(9632457)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3781082
13	18.4	4.2	8.0	chr7	151303539	151303610	(8042363)	+	(GGCTG)n	Simple_repeat	1	75	(0)	3783206
247	23.5	8.1	2.9	chr7	151736812	151736881	(7609092)	C	Plat_L3	LINE/CR1	(3)	3583	3510	3783969
914	24.5	10.8	0.4	chr7	155204985	155205258	(4140715)	+	Charlie1a	DNA/hAT-Charlie	1043	1348	(107)	3789347
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
2277	11.0	1.0	0.0	chr7	155344041	155344348	(4001625)	+	AluSc8	SINE/Alu	1	311	(0)	3789533
57	12.4	3.1	0.0	chr7	155509462	155509558	(3836415)	+	GA-rich	Low_complexity	1	100	(0)	3789721
18	20.0	5.1	1.6	chr7	155815264	155815322	(3530651)	+	(TCCC)n	Simple_repeat	1	62	(0)	3790116
486	20.3	9.2	1.4	chr7	156639458	156639597	(2706376)	+	L1MEc	LINE/L1	37	188	(6212)	3791164
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
327	28.9	4.0	1.6	chr7	156929810	156929932	(2416041)	+	MIRb	SINE/MIR	135	260	(8)	3791578
615	27.2	12.4	0.0	chr7	156929996	156930249	(2415724)	+	L2	LINE/L2	2140	2429	(990)	3791579
246	17.7	3.7	7.1	chr7	156930286	156930370	(2415603)	+	LTR105_Mam	LTR/ERVL	32	113	(487)	3791580
297	9.1	7.9	7.1	chr7	156930342	156930415	(2415558)	C	AluY	SINE/Alu	(73)	60	1	3791581
2503	16.7	2.7	2.9	chr7	158179677	158180163	(1165810)	+	MER66B	LTR/ERV1	1	486	(0)	3793062
18272	15.2	3.3	0.7	chr7	158180164	158182342	(1163631)	C	L1PB3	LINE/L1	(1185)	5677	3435	3793060
298	28.6	1.1	1.1	chr7	158524618	158524709	(821264)	+	MLT1B	LTR/ERVL-MaLR	23	114	(276)	3793330
875	24.6	5.2	0.0	chr7	158524710	158524929	(821044)	C	MER8	DNA/TcMar-Tigger	(7)	232	1	3793331
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1185	19.0	1.7	0.0	chr8	2511171	2511396	(142627240)	C	MER66B	LTR/ERV1	(0)	486	257	3796899
2246	19.3	2.3	1.1	chr8	2579927	2580403	(142558233)	C	MER66B	LTR/ERV1	(2)	484	2	3796999
2572	18.7	1.9	0.4	chr8	4209603	4210081	(140928555)	C	MER66B	LTR/ERV1	(0)	486	1	3799097
2529	18.3	4.3	0.6	chr8	5348182	5348649	(139789987)	C	MER66B	LTR/ERV1	(0)	486	1	3800548
2465	16.7	6.2	0.4	chr8	6173502	6173959	(138964677)	+	MER66B	LTR/ERV1	1	486	(0)	3801611
399	32.6	2.2	0.0	chr8	6174016	6174150	(138964486)	C	MLT1H2	LTR/ERVL-MaLR	(299)	190	53	3801612
231	30.4	6.0	0.0	chr8	10273768	10273846	(134864790)	C	LTR67B	LTR/ERVL	(7)	613	530	3807803
835	22.7	7.6	1.6	chr8	10273936	10274181	(134864455)	C	LTR41	LTR/ERVL	(505)	263	2	3807804
1010	22.9	7.3	1.1	chr8	11796450	11796718	(133341918)	C	MER89	LTR/ERV1	(0)	559	273	3810167
2336	19.0	2.9	1.7	chr8	11796765	11797241	(133341395)	C	MER66B	LTR/ERV1	(3)	483	1	3810168
4013	7.1	1.0	0.2	chr8	11941493	11942000	(133196636)	C	MER9a3	LTR/ERVK	(0)	512	1	3810420
2626	14.9	2.7	11.6	chr8	13210999	13211531	(131927105)	+	MER66D	LTR/ERV1	1	484	(0)	3812308
2095	23.9	1.0	0.8	chr8	15335261	15335745	(129802891)	+	MER66B	LTR/ERV1	1	486	(0)	3815196
2501	5.8	0.3	0.0	chr8	17912374	17912664	(127225972)	C	AluY	SINE/Alu	(19)	292	1	3818930
17248	27.8	2.7	2.6	chr8	17912665	17914948	(127223688)	C	HERVK-int	LTR/ERVK	(4257)	3279	966	3818929
2942	15.2	2.3	0.4	chr8	19215213	19215682	(125922954)	+	MER66B	LTR/ERV1	8	486	(0)	3820854
1114	26.5	4.9	0.5	chr8	21400194	21400561	(123738075)	C	L1ME3E	LINE/L1	(5208)	1895	1511	3824356
2971	14.3	1.0	2.7	chr8	21400564	21401052	(123737584)	C	MER66B	LTR/ERV1	(0)	486	6	3824360
2668	17.8	1.0	3.8	chr8	22771613	22772110	(122366526)	+	MER66B	LTR/ERV1	3	486	(0)	3826774
581	30.2	0.5	6.0	chr8	22772111	22772273	(122366363)	C	MIRb	SINE/MIR	(45)	223	66	3826773
202	21.9	4.0	8.8	chr8	22772320	22772399	(122366237)	+	MIRb	SINE/MIR	193	268	(0)	3826775
1975	15.8	2.6	0.0	chr8	25227873	25228176	(119910460)	C	AluJb	SINE/Alu	(0)	312	1	3830732
1892	19.0	3.8	0.0	chr8	25228319	25228671	(119909965)	C	MER66B	LTR/ERV1	(0)	486	120	3830733
386	31.9	5.0	5.7	chr8	25228674	25228936	(119909700)	C	L1M5	LINE/L1	(1415)	4731	4471	3830734
2542	6.8	0.0	1.0	chr8	26290862	26291171	(118847465)	C	AluSg	SINE/Alu	(3)	307	1	3832498
17	19.8	3.2	4.6	chr8	26291426	26291488	(118847148)	+	(CCGCC)n	Simple_repeat	1	65	(0)	3832499
26	20.3	0.0	1.7	chr8	26291539	26291598	(118847038)	+	(CGC)n	Simple_repeat	1	60	(0)	3832500
972	30.6	7.3	1.4	chr8	27153367	27154013	(117984623)	+	L1ME3F	LINE/L1	5528	6215	(28)	3833889
2896	15.3	1.6	0.8	chr8	27154056	27154537	(117984099)	C	MER66B	LTR/ERV1	(0)	486	1	3833890
3157	14.9	0.6	0.4	chr8	27626558	27627042	(117511594)	+	MER66B	LTR/ERV1	1	486	(0)	3834694
2486	27.6	13.6	2.3	chr8	27627043	27627574	(117511062)	+	MLT1J2-int	LTR/ERVL-MaLR	767	1387	(0)	3834693
2600	16.3	3.9	1.3	chr8	27970290	27970761	(117167875)	+	MER66B	LTR/ERV1	2	486	(0)	3835307
1287	23.3	11.4	4.0	chr8	27970762	27970822	(117167814)	+	MLT1F	LTR/ERVL-MaLR	400	457	(91)	3835306
394	16.7	5.6	1.2	chr8	27970908	27970992	(117167644)	+	MLT1F	LTR/ERVL-MaLR	472	560	(0)	3835306
403	19.4	3.1	4.1	chr8	28088966	28089062	(117049574)	C	L2	LINE/L2	(925)	2494	2399	3835531
2583	10.0	3.8	7.7	chr8	28089257	28089323	(117049313)	C	MER4D1	LTR/ERV1	(1)	899	833	3835532
2924	16.2	1.0	0.6	chr8	28089324	28089807	(117048829)	C	MER66B	LTR/ERV1	(0)	486	1	3835533
2393	17.1	2.1	9.3	chr8	28403890	28404413	(116734223)	+	MER66B	LTR/ERV1	2	486	(0)	3836064
3391	15.1	0.6	0.9	chr8	34579410	34579952	(110558684)	+	MER66C	LTR/ERV1	1	541	(14)	3846314
17	0.0	0.0	0.0	chr8	34580017	34580035	(110558601)	+	(T)n	Simple_repeat	1	19	(0)	3846315
2529	15.7	8.2	0.2	chr8	36474977	36475416	(108663220)	C	MER66A	LTR/ERV1	(0)	478	1	3848963
2464	7.4	0.0	1.3	chr8	38012362	38012672	(107125964)	+	AluY	SINE/Alu	1	307	(4)	3851435
1911	18.8	8.3	5.2	chr8	38012673	38012794	(107125842)	+	MER4-int	LTR/ERV1	1383	1505	(5093)	3851434
27	0.0	0.0	0.0	chr8	38012795	38012820	(107125816)	+	(TTTAT)n	Simple_repeat	1	26	(0)	3851436
1911	18.8	8.3	5.2	chr8	38012821	38013026	(107125610)	+	MER4-int	LTR/ERV1	1506	1707	(4891)	3851434
254	24.2	6.1	0.0	chr8	38012994	38013055	(107125581)	+	MER4-int	LTR/ERV1	2577	2642	(3689)	3851434
4437	7.8	1.8	5.1	chr8	38013084	38013774	(107124862)	C	LTR76	LTR/ERV1	(7)	668	1	3851437
2507	19.1	2.7	0.4	chr8	41333642	41334114	(103804522)	+	MER66B	LTR/ERV1	3	486	(0)	3856823
2473	21.1	0.6	1.7	chr8	42663862	42664344	(102474292)	+	MER66A	LTR/ERV1	1	478	(0)	3859238
1520	15.4	4.2	2.0	chr8	42664454	42664758	(102473878)	C	L1MA4	LINE/L1	(0)	6300	5989	3859239
660	30.2	13.4	5.0	chr8	51958018	51958199	(93180437)	+	LTR16D1	LTR/ERVL	185	355	(320)	3867506
3127	17.0	0.6	0.6	chr8	51958200	51958685	(93179951)	C	MER66B	LTR/ERV1	(0)	486	1	3867507
28	0.0	0.0	0.0	chr8	56210769	56210794	(88927842)	+	(GAG)n	Simple_repeat	1	26	(0)	3873665
16	14.4	0.0	0.0	chr8	56210928	56210958	(88927678)	+	(TTATT)n	Simple_repeat	1	31	(0)	3873666
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
40	0.0	0.0	0.0	chr8	58553556	58553592	(86585044)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	3876759
5054	23.6	5.8	1.5	chr8	61835759	61836993	(83301643)	C	L1M2	LINE/L1	(4868)	1981	690	3881188
2150	13.7	1.6	0.0	chr8	63158512	63158817	(81979819)	+	AluSx1	SINE/Alu	1	311	(1)	3882817
911	21.2	10.7	2.9	chr8	63158818	63159098	(81979538)	+	L1MD3	LINE/L1	7045	7561	(434)	3882814
516	15.5	0.8	5.1	chr8	63159106	63159237	(81979399)	C	MER66D	LTR/ERV1	(35)	519	379	3882818
522	10.1	0.0	0.0	chr8	63159238	63159306	(81979330)	+	L1PB	LINE/L1	3995	4063	(2083)	3882819
4015	12.8	4.7	3.5	chr8	63159307	63159482	(81979154)	C	MER50B	LTR/ERV1	(0)	697	516	3882820
1911	15.6	0.0	3.5	chr8	63159483	63159797	(81978839)	+	AluSx1	SINE/Alu	1	304	(8)	3882821
2924	16.2	1.0	0.6	chr8	65851139	65851622	(79287014)	+	MER66B	LTR/ERV1	1	486	(0)	3886515
1787	20.0	1.7	14.8	chr8	65851623	65851807	(79286829)	+	MLT1C	LTR/ERVL-MaLR	5	141	(326)	3886516
2304	10.5	0.3	0.0	chr8	65851808	65852101	(79286535)	+	AluSp	SINE/Alu	1	295	(18)	3886517
28	0.0	0.0	0.0	chr8	70668749	70668775	(74469861)	+	(T)n	Simple_repeat	1	27	(0)	3894217
38	0.0	0.0	0.0	chr8	70669607	70669639	(74468997)	+	(TG)n	Simple_repeat	1	33	(0)	3894218
13	0.0	0.0	0.0	chr8	70669640	70669656	(74468980)	+	(AGT)n	Simple_repeat	1	17	(0)	3894219
2665	5.0	0.0	0.0	chr8	70669665	70669965	(74468671)	C	AluY	SINE/Alu	(10)	301	1	3894220
870	28.3	5.5	1.4	chr8	76953350	76953629	(68185007)	+	MER115	DNA/hAT-Tip100	368	659	(34)	3902857
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
1662	13.7	4.4	4.7	chr8	86513855	86514153	(58624483)	C	AluJo	SINE/Alu	(14)	298	1	3916200
13	10.8	6.5	0.0	chr8	86514397	86514427	(58624209)	+	(CCCGCC)n	Simple_repeat	1	33	(0)	3916201
2451	20.0	2.9	1.9	chr8	88603822	88604301	(56534335)	C	MER66B	LTR/ERV1	(1)	485	1	3918835
2182	19.6	3.5	1.9	chr8	90019262	90019739	(55118897)	C	MER66B	LTR/ERV1	(0)	486	1	3920639
22814	8.6	0.5	0.5	chr8	90388876	90392910	(54745726)	+	L1PA7	LINE/L1	2120	6154	(0)	3921107
518	30.5	2.1	0.5	chr8	90393178	90393368	(54745268)	C	L1MEd	LINE/L1	(3574)	2572	2379	3921108
35	5.0	0.0	0.0	chr8	90985245	90985286	(54153350)	+	(GGCGGGG)n	Simple_repeat	1	42	(0)	3921892
16	10.5	3.2	0.0	chr8	92103158	92103188	(53035448)	+	(CTCC)n	Simple_repeat	1	32	(0)	3923413
17	21.4	3.9	5.0	chr8	92103352	92103428	(53035208)	+	(GCGCCGC)n	Simple_repeat	1	80	(0)	3923414
12	9.8	0.0	0.0	chr8	92103580	92103601	(53035035)	+	(GGGC)n	Simple_repeat	1	22	(0)	3923415
189	29.5	14.1	6.2	chr8	92842127	92842256	(52296380)	C	L2c	LINE/L2	(33)	3354	3213	3924378
244	31.6	1.7	6.6	chr8	92842268	92842389	(52296247)	+	LTR33	LTR/ERVL	32	147	(356)	3924379
1273	18.9	4.3	0.0	chr8	92842396	92842639	(52295997)	C	MER66B	LTR/ERV1	(0)	486	232	3924380
308	27.1	5.0	2.0	chr8	92842646	92842743	(52295893)	+	MamGypsy2-I	LTR/Gypsy	1438	1538	(2628)	3924381
12	12.0	3.7	0.0	chr8	94474885	94474911	(50663725)	+	(CCTC)n	Simple_repeat	1	28	(0)	3926895
14	13.8	0.0	5.6	chr8	94475139	94475174	(50663462)	+	(CCTGC)n	Simple_repeat	1	36	(0)	3926896
308	16.7	0.0	0.0	chr8	95756554	95756601	(49382035)	+	MIR3	SINE/MIR	114	161	(47)	3929250
276	30.6	1.6	9.5	chr8	95756644	95756780	(49381856)	+	Charlie15a	DNA/hAT-Charlie	52	177	(47)	3929251
180	25.9	10.4	10.4	chr8	97955620	97955744	(47182892)	C	L2b	LINE/L2	(11)	3364	3240	3932810
342	23.5	5.5	3.2	chr8	97955797	97955919	(47182717)	C	L2a	LINE/L2	(0)	3426	3301	3932811
2112	17.6	2.7	8.0	chr8	97955960	97956193	(47182443)	C	MER66B	LTR/ERV1	(0)	486	267	3932812
1971	11.1	4.2	0.0	chr8	97956194	97956463	(47182173)	C	AluSq	SINE/Alu	(18)	295	14	3932813
16	19.0	4.5	5.7	chr8	98825936	98826002	(46312634)	+	(GGCG)n	Simple_repeat	1	70	(0)	3934229
29	23.9	1.9	3.7	chr8	98826003	98826021	(46312615)	+	(GGCCGG)n	Simple_repeat	51	107	(0)	3934228
930	24.2	1.2	2.0	chr8	99950462	99950706	(45187930)	+	MSTD	LTR/ERVL-MaLR	154	396	(0)	3935931
2742	25.8	5.8	10.3	chr8	99950830	99951744	(45186892)	C	MLT1J-int	LTR/ERVL-MaLR	(395)	992	122	3935932
648	25.6	7.5	2.8	chr8	100667499	100667815	(44470821)	C	Charlie20a	DNA/hAT-Charlie	(257)	550	218	3937217
202	18.2	0.0	0.0	chr8	103020634	103020666	(42117970)	+	MIRb	SINE/MIR	217	249	(19)	3941610
181	29.8	0.0	2.1	chr8	103020638	103020685	(42117951)	+	L2a	LINE/L2	3375	3421	(5)	3941611
19	15.2	8.7	2.7	chr8	103020989	103021057	(42117579)	+	(CGGCAG)n	Simple_repeat	1	75	(0)	3941612
17	27.8	2.2	0.0	chr8	104351291	104351336	(40787300)	+	(GT)n	Simple_repeat	1	47	(0)	3943559
2852	15.0	0.8	9.8	chr8	104351378	104351909	(40786727)	C	MER66D	LTR/ERV1	(0)	484	1	3943560
19	14.7	0.0	6.4	chr8	104588904	104588957	(40549679)	+	GA-rich	Low_complexity	1	50	(0)	3943935
33	2.9	0.0	0.0	chr8	104588965	104588999	(40549637)	+	(CGC)n	Simple_repeat	1	35	(0)	3943936
13	18.9	6.0	1.9	chr8	104589053	104589102	(40549534)	+	(GCCGCCC)n	Simple_repeat	1	53	(0)	3943937
11	24.7	4.0	1.9	chr8	109539801	109539850	(35598786)	+	(GCGAGC)n	Simple_repeat	1	52	(0)	3950981
15	20.7	5.1	0.0	chr8	109539836	109539874	(35598762)	+	(GC)n	Simple_repeat	1	41	(0)	3950982
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
1307	30.2	6.4	5.8	chr8	111832081	111832650	(33305986)	+	MLT1E2	LTR/ERVL-MaLR	1	574	(53)	3954024
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
247	29.8	2.3	0.0	chr8	124041193	124041276	(21097360)	+	MIRc	SINE/MIR	63	148	(120)	3972986
1967	18.4	10.1	4.2	chr8	125703795	125704242	(19434394)	C	MER66A	LTR/ERV1	(0)	478	2	3976222
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
1757	20.4	6.4	0.7	chr8	141601664	141602116	(3536520)	+	MER66B	LTR/ERV1	1	481	(5)	4003876
16	13.2	0.0	0.0	chr8	142075069	142075093	(3063543)	+	(CA)n	Simple_repeat	1	25	(0)	4004490
3180	3.5	0.0	0.0	chr8	142075272	142075637	(3062999)	+	L1PA3	LINE/L1	5772	6137	(18)	4004491
186	30.2	3.6	0.0	chr8	142474034	142474086	(2664550)	C	MIRb	SINE/MIR	(90)	178	124	4004946
1213	26.7	9.8	0.6	chr8	142553606	142554239	(2584397)	C	L1MEd	LINE/L1	(2674)	3726	3029	4005038
2729	17.7	2.1	0.4	chr8	142554380	142554849	(2583787)	C	MER66A	LTR/ERV1	(0)	478	1	4005039
361	31.7	6.4	5.3	chr8	143068856	143069251	(2069385)	+	ERVL-E-int	LTR/ERVL	4741	5145	(522)	4005682
3143	19.2	3.8	0.0	chr8	143069252	143069838	(2068798)	+	LTR38B	LTR/ERV1	1	610	(0)	4005683
2012	16.4	0.0	1.6	chr8	143546160	143546476	(1592160)	+	AluJb	SINE/Alu	1	312	(0)	4006312
643	25.8	7.3	13.9	chr8	143546526	143546588	(1592048)	C	MER41B	LTR/ERV1	(11)	473	423	4006313
2162	11.7	0.7	0.0	chr8	143546589	143546879	(1591757)	C	AluSq	SINE/Alu	(20)	293	1	4006314
1078	14.0	0.2	0.5	chr8	143669231	143669438	(1469198)	C	LTR10B1	LTR/ERV1	(55)	492	240	4006487
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
35	30.4	1.3	3.1	chr8	144358138	144358294	(780342)	+	G-rich	Low_complexity	1	159	(0)	4007509
11	23.9	7.4	0.0	chr8	144358704	144358757	(779879)	+	G-rich	Low_complexity	1	58	(0)	4007510
280	24.5	11.3	1.1	chr8	144761107	144761201	(377435)	+	MER67A	LTR/ERV1	1	106	(437)	4008055
1485	17.5	3.5	11.9	chr8	144761223	144761452	(377184)	C	MER66D	LTR/ERV1	(1)	483	258	4008056
1927	14.2	14.7	0.8	chr8	144761453	144761820	(376816)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4008057
2219	13.8	0.3	0.3	chr8	144767200	144767511	(371125)	C	AluJb	SINE/Alu	(0)	312	1	4008066
7745	6.6	1.7	1.5	chr8	144949447	144950446	(188190)	+	LTR5B	LTR/ERVK	1	1002	(0)	4008354
1515	11.5	5.8	0.8	chr9	12415768	12416001	(125978716)	+	MER44A	DNA/TcMar-Tigger	2	248	(91)	4026230
2412	14.6	5.2	0.0	chr9	12416002	12416404	(125978313)	C	MER66C	LTR/ERV1	(2)	553	129	4026231
180	36.3	5.1	4.5	chr9	13268575	13268750	(125125967)	C	L2c	LINE/L2	(191)	3196	3020	4027377
15	4.8	0.0	0.0	chr9	16192132	16192153	(122202564)	+	(CTG)n	Simple_repeat	1	22	(0)	4031597
27	25.4	1.7	5.7	chr9	16192460	16192468	(122202249)	+	(CCCT)n	Simple_repeat	1	121	(0)	4031598
27	23.1	4.5	3.5	chr9	16192469	16192578	(122202139)	+	(CTCTCCT)n	Simple_repeat	1	115	(0)	4031599
2181	8.1	0.0	6.2	chr9	19380563	19380869	(119013848)	+	AluSx1	SINE/Alu	1	288	(24)	4036215
16	15.8	2.2	4.3	chr9	19408910	19408955	(118985762)	+	(AGGCG)n	Simple_repeat	1	47	(0)	4036276
2764	17.2	2.1	0.6	chr9	24906134	24906606	(113488111)	C	MER66B	LTR/ERV1	(0)	486	7	4043673
1922	13.3	4.9	2.8	chr9	27281205	27281566	(111113151)	+	MER66D	LTR/ERV1	115	484	(0)	4046912
54129	7.6	0.5	0.2	chr9	31771655	31778849	(106615868)	+	HERVK11-int	LTR/ERVK	1	7214	(739)	4052850
326	20.0	2.6	0.0	chr9	32526496	32526570	(105868147)	C	L1ME2	LINE/L1	(18)	6146	6070	4053796
12171	8.8	0.5	0.0	chr9	33339528	33341100	(105053617)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4055240
2289	17.9	6.8	1.9	chr9	33410996	33411457	(104983260)	+	MER66B	LTR/ERV1	1	486	(0)	4055378
1760	9.4	0.0	0.0	chr9	33411486	33411708	(104983009)	C	AluSx1	SINE/Alu	(14)	298	76	4055379
11	22.1	5.4	3.4	chr9	33676731	33676786	(104717931)	+	(TGGCTC)n	Simple_repeat	1	59	(0)	4055806
30	0.0	0.0	0.0	chr9	33677010	33677037	(104717680)	+	(GCC)n	Simple_repeat	1	28	(0)	4055807
15	12.0	0.0	0.0	chr9	33677312	33677338	(104717379)	+	(CGC)n	Simple_repeat	1	27	(0)	4055808
15	0.0	0.0	0.0	chr9	33677386	33677404	(104717313)	+	(GCC)n	Simple_repeat	1	19	(0)	4055809
3051	26.7	5.9	8.1	chr9	33677515	33678799	(104715918)	C	L1M4	LINE/L1	(1344)	4802	3485	4055810
2418	16.3	0.2	12.6	chr9	35574734	35575281	(102819436)	+	MER66B	LTR/ERV1	1	480	(6)	4059103
8143	25.4	8.7	8.0	chr9	35575289	35578908	(102815809)	+	MER66-int	LTR/ERV1	1	3647	(3029)	4059103
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
35	42.0	0.8	0.8	chr9	35829424	35829664	(102565053)	+	(CCGCCC)n	Simple_repeat	1	243	(0)	4059488
304	24.6	8.1	0.9	chr9	36036609	36036723	(102357994)	+	MIR3	SINE/MIR	76	199	(9)	4059830
13	14.7	7.9	0.0	chr9	37904198	37904235	(100490482)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	4063617
372	36.0	6.6	0.0	chr9	37904653	37904877	(100489840)	+	MIRc	SINE/MIR	19	259	(9)	4063618
930	25.7	7.4	0.0	chr9	40951786	40952022	(97442695)	+	7SLRNA	srpRNA	3	258	(62)	4067964
383	20.0	1.2	0.0	chr9	40952277	40952356	(97442361)	+	7SLRNA	srpRNA	230	310	(10)	4067964
853	15.3	3.2	19.9	chr9	40952372	40952621	(97442096)	C	L1MB4	LINE/L1	(483)	5700	5483	4067963
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
1917	17.4	3.2	4.8	chr9	61155706	61156145	(77238572)	+	MER66B	LTR/ERV1	54	486	(0)	4071666
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
12	29.1	4.0	2.6	chr9	71446942	71447015	(66947702)	+	(GCCTCC)n	Simple_repeat	1	77	(0)	4084667
534	26.3	12.7	1.1	chr9	74886711	74886898	(63507819)	C	MIR	SINE/MIR	(31)	231	19	4090130
17	16.4	0.0	0.0	chr9	75028093	75028126	(63366591)	+	(GCC)n	Simple_repeat	1	34	(0)	4090399
11335	10.7	0.2	1.1	chr9	80969913	80971507	(57423210)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4099238
9502	13.9	4.4	4.4	chr9	81507203	81508779	(56885938)	+	LTR12C	LTR/ERV1	3	1579	(0)	4100002
1402	19.8	3.2	2.7	chr9	83921775	83922112	(54472605)	C	L1MB5	LINE/L1	(8)	6166	5827	4103728
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
9372	17.3	3.6	2.6	chr9	86649325	86652187	(51742530)	C	L1MD1	LINE/L1	(0)	6242	3349	4108243
2488	18.1	2.3	3.1	chr9	86652220	86652709	(51742008)	C	MER66B	LTR/ERV1	(0)	486	1	4108244
16	0.0	0.0	0.0	chr9	86947767	86947783	(51446934)	+	(T)n	Simple_repeat	1	17	(0)	4108707
28	16.3	0.0	0.0	chr9	86948006	86948053	(51446664)	+	(T)n	Simple_repeat	1	48	(0)	4108708
2454	8.8	0.7	0.0	chr9	92689538	92689843	(45704874)	C	AluY	SINE/Alu	(3)	308	1	4117094
5389	17.1	8.3	1.1	chr9	92689844	92691051	(45703666)	C	L1MCa	LINE/L1	(4700)	2051	708	4117093
13	13.2	6.1	0.0	chr9	93566861	93566893	(44827824)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	4118315
34	23.3	2.2	5.6	chr9	95317200	95317338	(43077379)	+	(CCCGCCT)n	Simple_repeat	1	142	(0)	4121018
12	23.5	1.8	5.4	chr9	95317779	95317833	(43076884)	+	G-rich	Low_complexity	1	56	(0)	4121019
2798	2.3	0.0	0.0	chr9	96231877	96232204	(42162513)	C	AluYa5	SINE/Alu	(0)	311	1	4122453
281	30.8	7.0	6.1	chr9	96232260	96232456	(42162261)	C	MIR3	SINE/MIR	(7)	201	3	4122454
11360	8.6	0.7	0.1	chr9	96865586	96867148	(41527569)	+	THE1B-int	LTR/ERVL-MaLR	1	1573	(7)	4123572
31	0.0	3.0	0.0	chr9	97237764	97237796	(41156921)	+	(TTTA)n	Simple_repeat	1	34	(0)	4124186
2425	6.2	0.7	0.0	chr9	97237799	97238071	(41156646)	C	AluSg4	SINE/Alu	(35)	275	1	4124187
7163	19.7	3.3	2.5	chr9	97753097	97753802	(40640915)	C	L1MD3	LINE/L1	(13)	7982	7281	4125065
2849	14.2	1.2	4.4	chr9	97753803	97754304	(40640413)	C	MER66B	LTR/ERV1	(0)	486	1	4125066
709	29.3	11.2	3.2	chr9	100088270	100088548	(38306169)	+	L2a	LINE/L2	2939	3242	(184)	4129533
25	26.0	3.5	3.4	chr9	104868964	104869083	(33525634)	+	G-rich	Low_complexity	1	120	(0)	4136380
27	13.1	0.0	0.0	chr9	104926447	104926488	(33468229)	+	(A)n	Simple_repeat	1	42	(0)	4136496
15	21.3	8.3	0.0	chr9	104926641	104926700	(33468017)	+	(CCAGC)n	Simple_repeat	1	65	(0)	4136497
2309	8.6	2.6	0.0	chr9	104926930	104927231	(33467486)	+	AluSx	SINE/Alu	1	310	(2)	4136498
689	29.9	11.6	3.4	chr9	107282266	107282749	(31111968)	C	L2a	LINE/L2	(0)	3426	2771	4140360
230	28.6	5.1	0.0	chr9	107282734	107282789	(31111928)	C	MIR	SINE/MIR	(181)	81	23	4140361
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
2054	17.8	7.9	1.3	chr9	108468487	108468935	(29925782)	+	MER66C	LTR/ERV1	61	541	(14)	4142777
559	31.1	1.5	1.0	chr9	109888202	109888399	(28506318)	+	MIRb	SINE/MIR	25	223	(45)	4145288
2947	16.4	4.8	0.2	chr9	109975089	109975584	(28419133)	C	MLT2B1	LTR/ERVL	(0)	520	1	4145441
2628	26.4	9.4	1.9	chr9	113749729	113750650	(24644067)	C	L1M7	LINE/L1	(3682)	2533	1544	4152316
1600	19.6	8.8	6.8	chr9	113750651	113751049	(24643668)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4152318
424	27.2	12.7	6.4	chr9	114169909	114170209	(24224508)	+	MER102b	DNA/hAT-Charlie	1	341	(0)	4153096
295	33.3	4.4	3.0	chr9	114187665	114187930	(24206787)	C	L1ME4a	LINE/L1	(228)	5896	5627	4153132
723	22.4	0.0	3.6	chr9	114187935	114187977	(24206740)	+	MIR	SINE/MIR	28	70	(192)	4153133
2290	17.6	10.9	0.0	chr9	114187978	114188410	(24206307)	C	MER66B	LTR/ERV1	(0)	486	1	4153134
335	21.1	16.5	7.8	chr9	114646618	114646771	(23747946)	+	MIRb	SINE/MIR	86	255	(13)	4154146
5675	11.9	3.9	8.5	chr9	114646816	114647862	(23746855)	C	L1MEg	LINE/L1	(1085)	5061	4047	4154147
194	33.3	2.8	1.4	chr9	116686928	116686997	(21707720)	C	MIR1_Amn	SINE/MIR	(80)	150	80	4157867
296	26.0	8.4	3.4	chr9	116687011	116687161	(21707556)	+	MIR3	SINE/MIR	23	175	(33)	4157868
2650	16.3	3.1	0.4	chr9	119742481	119742947	(18651770)	+	MER66B	LTR/ERV1	7	486	(0)	4163601
2135	13.9	3.0	3.3	chr9	119742979	119743343	(18651374)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4163602
195	33.3	0.0	0.0	chr9	121755812	121755865	(16638852)	+	L2c	LINE/L2	3266	3319	(68)	4167675
12124	8.6	0.3	0.2	chr9	123721880	123723457	(14671260)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4171200
16	0.0	0.0	0.0	chr9	125473079	125473096	(12921621)	+	(T)n	Simple_repeat	1	18	(0)	4174737
33	0.0	0.0	6.7	chr9	127224904	127224948	(11169769)	+	(GCGGG)n	Simple_repeat	1	45	(0)	4177819
890	16.9	0.0	0.0	chr9	127805482	127805611	(10589106)	+	FLAM_C	SINE/Alu	1	130	(13)	4179050
374	30.3	5.8	0.0	chr9	127805930	127806074	(10588643)	C	Kanga2_a	DNA/TcMar-Tc2	(683)	205	52	4179051
2227	7.5	0.0	0.4	chr9	128701942	128702247	(9692470)	C	AluSg	SINE/Alu	(0)	310	1	4181127
2241	11.5	0.0	1.3	chr9	129035657	129035969	(9358748)	C	AluSx3	SINE/Alu	(2)	309	1	4181934
281	29.4	9.4	1.6	chr9	129035970	129036015	(9358702)	C	MIRc	SINE/MIR	(115)	153	103	4181933
191	38.0	6.6	2.8	chr9	129036086	129036261	(9358456)	C	L2c	LINE/L2	(58)	3329	3147	4181935
2023	16.0	10.8	6.6	chr9	129263440	129263848	(9130869)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4182448
369	26.2	10.2	6.3	chr9	129263849	129263898	(9130819)	C	MIRb	SINE/MIR	(134)	134	81	4182447
2906	17.1	0.2	3.4	chr9	129263899	129264130	(9130587)	C	MER66B	LTR/ERV1	(0)	486	267	4182449
2238	12.9	0.0	0.3	chr9	129264131	129264441	(9130276)	C	AluSx1	SINE/Alu	(2)	310	1	4182450
2792	18.1	1.0	2.6	chr9	129272879	129273372	(9121345)	+	MER66B	LTR/ERV1	1	486	(0)	4182472
269	33.1	1.6	5.9	chr9	129273373	129273407	(9121310)	+	L2b	LINE/L2	3353	3386	(1)	4182471
2141	8.2	4.5	0.4	chr9	129623814	129624093	(8770624)	C	AluYh3a3	SINE/Alu	(0)	292	1	4183273
201	22.5	0.0	0.0	chr9	129624096	129624135	(8770582)	+	MIR3	SINE/MIR	154	193	(15)	4183274
247	25.9	1.7	0.0	chr9	129624130	129624187	(8770530)	C	L2c	LINE/L2	(7)	3380	3322	4183275
13	20.6	6.8	3.2	chr9	129803226	129803284	(8591433)	+	(GGC)n	Simple_repeat	1	63	(0)	4183683
16	20.5	3.6	5.2	chr9	129803417	129803472	(8591245)	+	(GC)n	Simple_repeat	1	58	(0)	4183684
13	14.8	0.0	3.1	chr9	130835203	130835234	(7559483)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4185897
53	15.9	8.3	0.0	chr9	130835649	130835781	(7558936)	+	(TC)n	Simple_repeat	1	144	(0)	4185898
789	19.6	0.7	0.0	chr9	131743791	131743933	(6650784)	+	FAM	SINE/Alu	29	172	(13)	4187594
266	26.7	0.0	0.0	chr9	133180156	133180215	(5214502)	C	ERV24_Prim-int	LTR/ERV1	(5607)	2600	2541	4190198
2127	10.4	0.0	0.0	chr9	133180264	133180562	(5214155)	+	AluSz	SINE/Alu	1	299	(13)	4190200
292	32.6	3.7	8.0	chr9	133589267	133589508	(4805209)	C	MIRb	SINE/MIR	(25)	243	2	4190803
244	16.5	1.1	0.4	chr9	134003173	134003619	(4391098)	+	(CCAT)n	Simple_repeat	1	452	(0)	4191388
3327	12.1	1.0	0.6	chr9	134894255	134894737	(3499980)	+	MER66B	LTR/ERV1	2	486	(0)	4192512
500	34.8	1.1	0.6	chr9	134894899	134895077	(3499640)	+	MLT1J2	LTR/ERVL-MaLR	1	180	(268)	4192513
1365	18.1	7.4	15.2	chr9	135142143	135142630	(3252087)	+	MER66A	LTR/ERV1	27	473	(5)	4192817
602	30.8	13.3	0.0	chr9	135142704	135143008	(3251709)	+	L2a	LINE/L2	3069	3420	(6)	4192818
2009	16.6	17.7	2.0	chr9	135172181	135172587	(3222130)	+	MER66B	LTR/ERV1	1	485	(1)	4192860
398	26.6	2.7	0.0	chr9	135172619	135172727	(3221990)	+	MER58A	DNA/hAT-Charlie	84	195	(29)	4192861
903	14.3	0.0	0.0	chr9	135172728	135172853	(3221864)	C	AluSx3	SINE/Alu	(15)	296	171	4192862
210	28.4	17.8	0.9	chr9	135237855	135237994	(3156723)	C	MIRb	SINE/MIR	(99)	169	3	4192937
1295	25.6	3.0	8.7	chr9	135238074	135238520	(3156197)	+	MER31B	LTR/ERV1	2	430	(36)	4192938
696	29.6	11.2	8.0	chr9	135888979	135889515	(2505202)	+	L1MEg	LINE/L1	338	893	(5349)	4193738
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
13	12.3	3.8	9.1	chr9	136118938	136118990	(2275727)	+	(GCCTGC)n	Simple_repeat	1	55	(0)	4194048
561	28.9	3.0	0.0	chr9	136135154	136135347	(2259370)	C	L1MC1	LINE/L1	(173)	6160	5961	4194072
541	30.2	4.5	8.2	chr9	137397382	137397699	(997018)	+	L1M4a1	LINE/L1	577	1156	(1423)	4195582
308	23.8	8.0	8.9	chrX	3034149	3034351	(153006544)	+	L1MEd	LINE/L1	1167	1367	(5736)	4364107
1686	17.4	11.9	3.3	chrX	3034359	3034750	(153006145)	C	MER66A	LTR/ERV1	(1)	477	48	4364108
1892	9.5	0.4	0.0	chrX	3550634	3550875	(152490020)	+	AluSz	SINE/Alu	11	253	(59)	4365072
2661	16.9	0.0	5.2	chrX	3550876	3550981	(152489914)	+	MER66A	LTR/ERV1	377	478	(0)	4365071
430	19.7	0.0	0.0	chrX	3551064	3551134	(152489761)	C	MER81	DNA/hAT-Blackjack	(22)	92	22	4365073
2089	20.4	4.3	0.6	chrX	6611051	6611518	(149429377)	+	MER66B	LTR/ERV1	1	486	(0)	4370406
573	22.6	0.6	6.6	chrX	6611519	6611611	(149429284)	+	MLT1E1	LTR/ERVL-MaLR	572	654	(0)	4370404
401	23.3	8.8	6.4	chrX	6611612	6611730	(149429165)	+	LTR16E1	LTR/ERVL	364	534	(4)	4370407
267	30.4	8.2	1.5	chrX	10358751	10358887	(145682008)	C	LTR67B	LTR/ERVL	(440)	180	34	4376366
2834	14.5	2.1	1.9	chrX	10358937	10359421	(145681474)	C	MER66B	LTR/ERV1	(0)	486	1	4376367
2061	20.1	3.7	4.3	chrX	13921388	13921581	(142119314)	C	MER66B	LTR/ERV1	(27)	459	267	4381975
2325	8.8	0.0	1.0	chrX	13921582	13921876	(142119019)	C	AluSg	SINE/Alu	(18)	292	1	4381976
928	25.7	2.2	2.2	chrX	20122630	20122852	(135918043)	C	MER58A	DNA/hAT-Charlie	(1)	223	1	4392596
2201	13.3	0.0	2.3	chrX	20122944	20123251	(135917644)	C	AluSq2	SINE/Alu	(12)	301	1	4392597
2523	9.5	0.3	0.3	chrX	20123256	20123560	(135917335)	C	AluSx1	SINE/Alu	(7)	305	1	4392598
11	7.5	6.7	3.1	chrX	37685777	37685806	(118355089)	+	(CCAGGT)n	Simple_repeat	1	32	(0)	4417771
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
2407	16.2	7.3	0.7	chrX	43188286	43188733	(112852162)	+	MER66C	LTR/ERV1	61	540	(15)	4427005
2046	13.1	5.8	1.6	chrX	43188965	43189329	(112851566)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4427006
1321	13.6	1.1	0.0	chrX	45742797	45743005	(110297890)	+	AluSx	SINE/Alu	96	312	(0)	4431158
3823	23.7	10.6	14.3	chrX	45743006	45743929	(110296966)	+	MLT1A1-int	LTR/ERVL-MaLR	748	1730	(5)	4431156
3629	13.1	0.6	1.1	chrX	49679867	49680406	(106360489)	C	MER66C	LTR/ERV1	(18)	537	1	4438214
2472	16.2	2.7	5.7	chrX	52363325	52363820	(103677075)	+	MER66C	LTR/ERV1	61	541	(14)	4441785
1482	26.2	5.2	4.8	chrX	53685558	53686114	(102354781)	+	L1ME3G	LINE/L1	122	680	(244)	4444217
187	19.1	2.1	0.0	chrX	53687100	53687146	(102353749)	+	MIR	SINE/MIR	205	252	(10)	4444218
235	33.9	4.8	0.2	chrX	54640098	54640214	(101400681)	+	L2c	LINE/L2	3224	3343	(44)	4446205
17	24.4	1.9	0.0	chrX	57121834	57121886	(98919009)	+	(CCGCCC)n	Simple_repeat	1	54	(0)	4448819
394	25.5	3.9	2.0	chrX	72277439	72277538	(83763357)	C	L2b	LINE/L2	(17)	3358	3257	4463037
2001	19.9	5.2	6.8	chrX	75086732	75087281	(80953614)	+	MER41B	LTR/ERV1	1	600	(34)	4466423
2259	23.3	3.2	5.9	chrX	78441955	78442560	(77598335)	C	HUERS-P1-int	LTR/ERV1	(5066)	1197	609	4469826
850	27.6	33.3	0.0	chrX	78442660	78442948	(77597947)	C	HUERS-P1-int	LTR/ERV1	(5876)	387	1	4469826
778	20.0	0.7	1.4	chrX	78442949	78443095	(77597800)	C	LTR8	LTR/ERV1	(0)	691	546	4469826
1737	11.7	5.2	0.7	chrX	78443106	78443397	(77597498)	C	L1MB7	LINE/L1	(5)	6677	6372	4469827
1058	27.7	8.8	0.3	chrX	95552930	95553230	(60487665)	C	MER45B	DNA/hAT-Tip100	(703)	337	9	4488057
2664	16.4	3.7	1.9	chrX	95553231	95553707	(60487188)	C	MER66B	LTR/ERV1	(0)	486	1	4488066
4683	20.4	5.9	6.1	chrX	95560563	95561659	(60479236)	C	MER66-int	LTR/ERV1	(5581)	1095	1	4488066
2768	17.5	1.0	0.4	chrX	95561660	95562142	(60478753)	C	MER66B	LTR/ERV1	(0)	486	1	4488066
13	15.8	2.7	2.6	chrX	101357263	101357299	(54683596)	+	A-rich	Low_complexity	1	38	(0)	4495899
6332	18.7	3.1	1.2	chrX	101500010	101501242	(54539653)	+	HERV16-int	LTR/ERVL	1840	3096	(1900)	4496127
1235	12.5	0.0	0.0	chrX	101501309	101501492	(54539403)	C	MER66D	LTR/ERV1	(0)	484	301	4496128
33	22.4	0.0	3.4	chrX	101501524	101501612	(54539283)	+	(AGC)n	Simple_repeat	1	89	(0)	4496129
1185	18.6	2.1	8.4	chrX	101501616	101501926	(54538969)	C	MER66D	LTR/ERV1	(193)	291	1	4496128
293	14.0	0.0	0.0	chrX	103297550	103297599	(52743296)	+	L1MB3	LINE/L1	6034	6083	(100)	4498405
2893	15.7	1.6	0.6	chrX	103297600	103298080	(52742815)	C	MER66B	LTR/ERV1	(0)	486	1	4498406
2351	8.7	1.0	0.0	chrX	103652432	103652719	(52388176)	C	AluY	SINE/Alu	(20)	291	1	4498943
340	15.0	0.0	0.0	chrX	103652733	103652792	(52388103)	+	L1P	LINE/L1	5320	5379	(786)	4498944
2982	16.3	0.0	2.2	chrX	103652793	103653289	(52387606)	C	MER66B	LTR/ERV1	(0)	486	1	4498945
21	19.2	1.8	1.8	chrX	103832218	103832277	(52208618)	+	(CGCCCG)n	Simple_repeat	1	60	(0)	4499219
10947	13.8	0.7	0.4	chrX	104975996	104977608	(51063287)	C	MER66-int	LTR/ERV1	(5058)	1618	1	4500911
2990	17.9	0.0	0.0	chrX	104977614	104978094	(51062801)	C	MER66B	LTR/ERV1	(5)	481	1	4500911
3450	20.9	2.2	1.2	chrX	106496372	106496467	(49544428)	C	L1MB8	LINE/L1	(13)	6165	6071	4502804
2384	18.2	1.5	2.6	chrX	106496468	106496929	(49543966)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	4502805
217	16.2	0.0	0.0	chrX	111681010	111681046	(44359849)	+	MIR	SINE/MIR	197	233	(29)	4510262
15	31.9	2.7	1.3	chrX	112840662	112840736	(43200159)	+	GA-rich	Low_complexity	1	77	(0)	4511970
274	38.0	2.5	3.1	chrX	115591770	115591932	(40448963)	C	MIRc	SINE/MIR	(104)	164	3	4515801
356	26.4	6.5	7.5	chrX	123764647	123764925	(32275970)	C	L1M3	LINE/L1	(2660)	3480	3205	4527272
38	0.0	0.0	0.0	chrX	123765232	123765266	(32275629)	+	(CCG)n	Simple_repeat	1	35	(0)	4527273
558	29.3	5.6	4.0	chrX	126620698	126620827	(29420068)	C	L1ME3D	LINE/L1	(11)	6231	6107	4531366
1452	20.9	13.4	4.8	chrX	126620828	126621041	(29419854)	C	MER66B	LTR/ERV1	(0)	486	288	4531367
2535	7.4	0.7	0.0	chrX	126621042	126621350	(29419545)	+	AluSc8	SINE/Alu	1	311	(0)	4531368
260	26.2	3.0	1.5	chrX	129905705	129905770	(26135125)	+	L2a	LINE/L2	3340	3406	(20)	4535554
51	29.3	1.3	4.6	chrX	133985596	133985833	(22055062)	+	G-rich	Low_complexity	1	241	(0)	4541902
575	24.0	3.1	3.1	chrX	134372652	134372810	(21668085)	C	MIRb	SINE/MIR	(14)	254	96	4542539
201	29.1	0.0	0.0	chrX	134372880	134372934	(21667961)	+	MIRc	SINE/MIR	171	225	(43)	4542540
71	27.0	4.4	4.9	chrX	134796358	134796747	(21244148)	+	GA-rich	Low_complexity	1	407	(0)	4543385
18	21.6	2.1	0.0	chrX	135022461	135022508	(21018387)	+	(GCGCT)n	Simple_repeat	1	49	(0)	4543827
1096	18.2	0.0	0.0	chrX	135740456	135740625	(20300270)	C	AluSx	SINE/Alu	(22)	290	121	4544766
556	29.4	13.9	2.9	chrX	135740757	135741176	(20299719)	+	LTR41	LTR/ERVL	127	600	(168)	4544767
2242	16.0	3.3	16.1	chrX	153045365	153045922	(2994973)	+	MER66D	LTR/ERV1	1	484	(0)	4569774
588	11.2	0.0	0.0	chrX	153583179	153583258	(2457637)	+	AluJo	SINE/Alu	6	85	(227)	4570428
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638