16	16.7	2.4	2.3	chr1	1116461	1116502	(247839920)	+	(AGGCGG)n	Simple_repeat	1	43	(0)	1383
822	19.3	3.8	0.5	chr1	3325546	3325748	(245630674)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	258	3911
571	23.8	13.6	1.7	chr1	3326203	3326441	(245629981)	C	MLT1C	LTR/ERVL-MaLR	(187)	280	9	3911
227	28.2	8.6	0.0	chr1	6200028	6200112	(242756310)	+	L2b	LINE/L2	596	688	(2731)	7813
45	0.0	0.0	0.0	chr1	19660069	19660109	(229296313)	+	(GTTTTT)n	Simple_repeat	1	41	(0)	34152
217	26.8	1.4	4.0	chr1	31384416	31384489	(217571933)	+	L2c	LINE/L2	3283	3354	(33)	60554
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
345	26.3	11.3	4.8	chr1	32713473	32713596	(216242826)	+	L2b	LINE/L2	3023	3155	(220)	63560
2209	7.5	0.0	3.6	chr1	32713617	32713951	(216242471)	C	AluY	SINE/Alu	(0)	311	2	63561
12	14.4	5.5	2.6	chr1	38578416	38578482	(210377940)	+	G-rich	Low_complexity	1	68	(0)	74939
109	16.1	0.0	1.0	chr1	46443286	46443478	(202512944)	+	(CCT)n	Simple_repeat	1	193	(0)	90055
1298	11.8	0.0	1.1	chr1	46443479	46443654	(202512768)	C	AluSx	SINE/Alu	(3)	309	134	90056
1090	27.9	5.0	5.5	chr1	57709006	57709476	(191246946)	C	L1MEd	LINE/L1	(5829)	1274	812	111356
3532	12.1	15.0	0.6	chr1	57709477	57710098	(191246324)	C	LTR9A1	LTR/ERV1	(0)	728	2	111364
201	34.6	8.9	0.8	chr1	61725540	61725673	(187230749)	C	MIRb	SINE/MIR	(122)	146	1	118695
570	36.4	10.7	0.3	chr1	62481736	62482085	(186474337)	C	L3	LINE/CR1	(2393)	1706	1316	120321
468	29.2	5.0	0.9	chr1	68443236	68443442	(180512980)	+	MER20B	DNA/hAT-Charlie	4	219	(0)	130666
1385	22.3	5.5	4.3	chr1	76040193	76040658	(172915764)	C	MER61E	LTR/ERV1	(54)	515	92	140836
438	28.6	6.8	6.4	chr1	78176150	78176448	(170779974)	+	L1M5	LINE/L1	5425	5719	(405)	144218
494	28.7	8.0	2.7	chr1	78176597	78176893	(170779529)	+	LTR79	LTR/ERVL	170	483	(44)	144220
84	36.9	2.3	1.2	chr1	78355018	78355416	(170601006)	+	(TCT)n	Simple_repeat	1	408	(0)	144481
61	22.8	1.5	0.4	chr1	80412339	80412482	(168543940)	+	GA-rich	Low_complexity	1	145	(0)	147140
59	19.2	0.8	0.0	chr1	85556056	85556174	(163400248)	+	(CCT)n	Simple_repeat	1	120	(0)	154350
22	24.0	0.0	0.0	chr1	111619785	111619838	(137336584)	+	(CGC)n	Simple_repeat	1	54	(0)	191804
43	2.3	0.0	0.0	chr1	111619876	111619919	(137336503)	+	(GGAGGAGGT)n	Simple_repeat	1	44	(0)	191805
30	4.8	5.7	4.0	chr1	125151026	125151095	(123805327)	+	(GATTCCATTC)n	Simple_repeat	1	74	(0)	207451
3167	19.7	5.0	4.7	chr1	161394003	161394486	(87561936)	C	MER21C	LTR/ERVL	(375)	563	1	237452
412	10.2	0.0	0.0	chr1	161394553	161394611	(87561811)	C	AluJb	SINE/Alu	(16)	296	238	237454
3694	12.2	14.3	0.6	chr1	161394612	161395239	(87561183)	C	LTR9A1	LTR/ERV1	(0)	728	1	237455
16	20.2	5.0	3.2	chr1	164558902	164558961	(84397461)	+	GA-rich	Low_complexity	1	63	(0)	242314
20	13.9	7.0	1.6	chr1	164559013	164559069	(84397353)	+	(CCCTCCT)n	Simple_repeat	1	61	(0)	242315
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
1190	18.1	8.1	1.2	chr1	174232918	174233157	(74723265)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	106	256935
16	18.8	4.7	0.0	chr1	174233158	174233200	(74723222)	+	(TCTC)n	Simple_repeat	1	45	(0)	256936
28071	1.6	0.1	0.0	chr1	174233267	174239293	(74717129)	C	L1PA2	LINE/L1	(2)	6153	125	256937
14	9.6	0.0	0.0	chr1	179882205	179882227	(69074195)	+	(TCC)n	Simple_repeat	1	23	(0)	265466
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
3376	16.7	13.5	0.5	chr1	201156959	201157591	(47798831)	C	LTR9A1	LTR/ERV1	(0)	728	1	295581
2352	9.6	1.6	0.0	chr1	201451496	201451798	(47504624)	C	AluSx4	SINE/Alu	(2)	308	1	296038
15	20.3	4.4	0.0	chr1	203626534	203626582	(45329840)	+	(CACCCA)n	Simple_repeat	1	51	(0)	299984
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
12	26.8	2.2	0.0	chr1	212433219	212433263	(36523159)	+	G-rich	Low_complexity	1	46	(0)	314491
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
30	6.3	3.9	1.9	chr1	224434205	224434256	(24522166)	+	(GGA)n	Simple_repeat	1	54	(0)	332549
41	21.7	1.3	6.5	chr1	224434409	224434559	(24521863)	+	G-rich	Low_complexity	1	153	(0)	332550
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
392	27.3	4.7	2.4	chr1	229269259	229269382	(19687040)	C	LTR104_Mam	LTR/Gypsy	(1328)	181	55	339983
526	29.7	11.0	0.0	chr1	231201776	231201970	(17754452)	C	L2a	LINE/L2	(0)	3426	3208	343098
127	21.2	1.0	2.5	chr1	231202005	231202317	(17754105)	+	GA-rich	Low_complexity	1	316	(0)	343099
318	27.7	4.7	1.6	chr1	231202318	231202464	(17753958)	C	L2a	LINE/L2	(310)	3116	2961	343098
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1600	18.6	11.8	3.0	chr1	236977208	236977578	(11978844)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	352577
973	19.2	2.0	2.5	chr1	237591443	237591645	(11364777)	C	MER20	DNA/hAT-Charlie	(0)	219	18	353571
3606	16.9	4.2	1.4	chr1	240486197	240486821	(8469601)	+	LTR9D	LTR/ERV1	1	643	(2)	357706
412	33.8	4.7	5.7	chr1	240486822	240487028	(8469394)	+	ERV3-16A3_I-int	LTR/ERVL	220	422	(4574)	357705
1626	20.9	4.4	0.9	chr10	11435093	11435421	(122362001)	+	MER34D	LTR/ERV1	3	343	(236)	386892
1728	22.2	13.3	9.2	chr10	11435431	11436154	(122361268)	C	LTR19C	LTR/ERV1	(15)	764	7	386893
13	4.5	0.0	7.4	chr10	11682562	11682588	(122114834)	+	(TTC)n	Simple_repeat	1	27	(0)	387319
63	4.9	4.4	3.4	chr10	11682589	11682702	(122114720)	+	(TCC)n	Simple_repeat	1	119	(0)	387320
3543	13.6	14.0	1.9	chr10	14469684	14470321	(119327101)	+	LTR9A1	LTR/ERV1	1	728	(0)	392514
343	29.6	6.2	4.3	chr10	14470322	14470419	(119327003)	C	MIRb	SINE/MIR	(158)	110	8	392513
3869	12.6	1.6	2.3	chr10	17247301	17247868	(116549554)	+	MER61E	LTR/ERV1	2	565	(4)	397034
521	28.2	6.6	10.4	chr10	17247869	17247980	(116549442)	+	L1M5	LINE/L1	3928	4024	(2122)	397031
2434	10.0	0.6	1.0	chr10	18095216	18095526	(115701896)	C	AluSz	SINE/Alu	(2)	310	1	398504
3529	17.3	12.1	1.7	chr10	18095527	18095653	(115701769)	+	LTR9A1	LTR/ERV1	605	728	(0)	398503
1777	14.5	22.4	1.1	chr10	21403220	21403555	(112393867)	+	LTR29	LTR/ERV1	1	426	(196)	403611
3503	15.2	14.0	0.0	chr10	21403556	21404180	(112393242)	C	LTR9A1	LTR/ERV1	(0)	728	2	403612
271	15.9	0.6	0.4	chr10	21717483	21717956	(112079466)	+	(TCC)n	Simple_repeat	1	477	(0)	404239
1371	10.1	0.0	0.0	chr10	21717977	21718144	(112079278)	C	AluSx1	SINE/Alu	(144)	168	1	404240
4652	15.5	1.9	2.4	chr10	25775528	25775677	(108021745)	+	LTR39	LTR/ERV1	1	152	(631)	410650
3832	13.9	13.9	0.6	chr10	25775678	25776308	(108021114)	C	LTR9A1	LTR/ERV1	(0)	728	1	410651
395	17.6	11.5	0.9	chr10	27001043	27001151	(106796271)	+	L1M5	LINE/L1	4536	4657	(1489)	412684
4135	11.7	9.8	0.1	chr10	27001289	27001946	(106795476)	C	LTR9A1	LTR/ERV1	(0)	728	1	412686
3972	13.6	7.8	1.2	chr10	55211846	55212524	(78584898)	+	LTR9A1	LTR/ERV1	1	728	(0)	449866
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
19	14.2	0.0	0.0	chr10	67885479	67885509	(65911913)	+	(T)n	Simple_repeat	1	31	(0)	468133
2129	14.8	0.0	0.7	chr10	68196475	68196784	(65600638)	C	AluJb	SINE/Alu	(4)	308	1	468692
27	3.5	0.0	0.0	chr10	68196798	68196827	(65600595)	+	(CCT)n	Simple_repeat	1	30	(0)	468693
4473	10.1	9.1	0.6	chr10	70768909	70769574	(63027848)	+	LTR9A1	LTR/ERV1	1	728	(0)	474092
317	31.2	4.2	6.8	chr10	70769575	70769655	(63027767)	C	MLT1K	LTR/ERVL-MaLR	(390)	205	121	474091
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
35	0.0	0.0	0.0	chr10	73168309	73168340	(60629082)	+	(GAG)n	Simple_repeat	1	32	(0)	478774
57	12.4	2.0	1.0	chr10	74025630	74025730	(59771692)	+	G-rich	Low_complexity	1	103	(0)	480419
422	24.2	10.3	4.3	chr10	74025766	74025784	(59771638)	+	MIR	SINE/MIR	74	90	(172)	480420
3492	11.6	16.8	0.7	chr10	74025785	74026394	(59771028)	C	LTR9A1	LTR/ERV1	(0)	728	1	480421
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
6210	7.5	3.0	0.5	chr10	84530309	84531069	(49266353)	C	LTR17	LTR/ERV1	(0)	780	1	496996
1395	19.1	0.8	2.3	chr10	84531070	84531326	(49266096)	+	MER61E	LTR/ERV1	277	529	(40)	496993
5131	20.9	4.1	2.4	chr10	84531334	84532693	(49264729)	C	L1MB8	LINE/L1	(514)	5670	4285	496992
3419	14.8	6.7	4.0	chr10	89019954	89020609	(44776813)	+	MER61F	LTR/ERV1	2	676	(0)	503728
445	33.1	6.3	3.1	chr10	89020620	89020912	(44776510)	C	L1MEi	LINE/L1	(1883)	329	27	503726
1810	13.4	1.9	1.3	chr10	90692341	90692466	(43104956)	C	L1MA9	LINE/L1	(718)	6594	6465	506177
3746	12.7	3.7	9.1	chr10	90692467	90692680	(43104742)	C	LTR9D	LTR/ERV1	(0)	645	446	506179
2411	8.9	0.3	1.0	chr10	90692681	90692993	(43104429)	C	AluY	SINE/Alu	(0)	311	1	506180
819	17.3	8.1	0.2	chr10	95880902	95881118	(37916304)	C	LTR9A1	LTR/ERV1	(0)	728	467	515039
36	20.6	3.5	3.4	chr10	102743955	102744068	(31053354)	+	GA-rich	Low_complexity	1	118	(0)	527500
37	23.4	1.0	1.9	chr10	119542653	119542755	(14254667)	+	GA-rich	Low_complexity	1	104	(0)	554096
2078	14.5	0.0	0.3	chr10	127486916	127487212	(6310210)	+	AluSz6	SINE/Alu	2	297	(15)	566225
6079	19.2	7.0	1.3	chr10	127487213	127488344	(6309078)	+	Charlie1a	DNA/hAT-Charlie	256	1455	(0)	566224
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
63	11.8	0.0	0.0	chr10	132942906	132943015	(854407)	+	(TCAT)n	Simple_repeat	1	110	(0)	572062
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
113	26.6	0.6	1.2	chr10	133787105	133787422	(10000)	+	G-rich	Low_complexity	1	320	(0)	572858
16	19.2	2.0	3.9	chr11	568893	568952	(134517670)	+	(CGCCCCG)n	Simple_repeat	1	58	(0)	573570
667	30.7	11.0	2.6	chr11	1346992	1347413	(133739209)	+	L1MC4a	LINE/L1	6636	7097	(785)	574509
814	10.9	6.2	0.0	chr11	34473258	34473394	(100613228)	+	L1MB3	LINE/L1	6038	6183	(0)	625321
366	17.9	0.0	3.7	chr11	34473395	34473475	(100613147)	+	L2	LINE/L2	2025	2102	(1317)	625322
297	22.2	0.0	0.0	chr11	34473478	34473540	(100613082)	C	FLAM_A	SINE/Alu	(11)	131	69	625323
379	15.1	0.0	0.0	chr11	34473525	34473577	(100613045)	C	AluSc5	SINE/Alu	(123)	186	134	625324
30	21.8	2.4	2.3	chr11	34473579	34473663	(100612959)	+	(TCC)n	Simple_repeat	1	87	(0)	625325
2822	14.7	3.3	1.8	chr11	34473710	34474220	(100612402)	C	L1MB8	LINE/L1	(5)	6173	5655	625326
2317	28.4	7.7	7.2	chr11	43953989	43954212	(91132410)	+	MLT1J2-int	LTR/ERVL-MaLR	1142	1351	(36)	639257
3562	11.6	10.6	1.2	chr11	43954222	43954571	(91132051)	C	LTR9D	LTR/ERV1	(1)	644	281	639263
997	18.3	11.4	0.0	chr11	46238631	46238832	(88847790)	C	MIR	SINE/MIR	(1)	261	34	643569
127	23.1	0.0	5.4	chr11	63771831	63772216	(71314406)	+	GA-rich	Low_complexity	1	386	(0)	664347
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
4194	13.5	8.2	0.0	chr11	74869317	74869984	(60216638)	+	LTR9A1	LTR/ERV1	1	728	(0)	684948
35825	15.3	3.6	2.3	chr11	74869998	74873955	(60212667)	+	HUERS-P3-int	LTR/ERV1	15	4291	(4628)	684948
3931	14.0	8.5	2.6	chr11	74884174	74884748	(60201874)	+	LTR9A1	LTR/ERV1	106	728	(0)	684948
15313	11.6	1.5	1.2	chr11	74884749	74884991	(60201631)	+	L1PREC2	LINE/L1	2958	3186	(2960)	684953
3614	18.1	4.6	3.5	chr11	93890164	93890932	(41195690)	+	LTR19C	LTR/ERV1	1	778	(1)	716363
2046	23.9	5.5	12.9	chr11	93890998	93891452	(41195170)	C	L1ME3B	LINE/L1	(21)	6221	5794	716364
4155	12.1	8.8	0.9	chr11	104122012	104122681	(30963941)	+	LTR9A1	LTR/ERV1	1	728	(0)	730384
470	33.1	2.3	8.2	chr11	110492419	110492747	(24593875)	+	L2	LINE/L2	2695	3003	(416)	739937
3091	16.9	13.1	0.6	chr11	110492861	110493497	(24593125)	C	LTR9A1	LTR/ERV1	(0)	728	1	739938
36	4.9	0.0	0.0	chr11	128521732	128521773	(6564849)	+	(TCC)n	Simple_repeat	1	42	(0)	769016
1617	19.4	2.6	5.3	chr12	804971	805363	(132469946)	C	L1MB3	LINE/L1	(364)	5816	5435	779510
4200	11.2	9.1	0.5	chr12	1056291	1056955	(132218354)	C	LTR9A1	LTR/ERV1	(0)	728	1	780015
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
2318	16.0	3.9	1.7	chr12	5139890	5140319	(128134990)	C	MER61C	LTR/ERV1	(1)	427	4	786586
4468	10.9	8.9	0.6	chr12	9388170	9388836	(123886473)	+	LTR9A1	LTR/ERV1	1	728	(0)	793782
1384	29.7	8.2	1.8	chr12	12803119	12803632	(120471677)	C	MLT1N2	LTR/ERVL-MaLR	(7)	555	6	798808
2149	12.1	0.7	0.0	chr12	17097227	17097508	(116177801)	C	AluSx	SINE/Alu	(24)	288	5	805103
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
591	29.2	0.0	0.0	chr12	24969762	24969915	(108305394)	+	MER63A	DNA/hAT-Blackjack	1	154	(56)	815730
3207	14.5	2.5	1.8	chr12	24969926	24970463	(108304846)	C	MER61E	LTR/ERV1	(19)	657	4	815731
53	14.1	4.5	0.9	chr12	65278446	65278556	(67996753)	+	GA-rich	Low_complexity	1	116	(0)	872573
11	21.5	4.4	2.1	chr12	65278562	65278606	(67996703)	+	(GGCGGCC)n	Simple_repeat	1	47	(0)	872574
266	23.4	1.5	0.0	chr12	67759969	67760032	(65515277)	+	MER61E	LTR/ERV1	159	223	(544)	876388
1571	18.6	12.2	1.1	chr12	67760028	67760439	(65514870)	+	LTR25	LTR/ERV1	161	844	(0)	876389
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
17	7.9	0.0	0.0	chr12	69703218	69703244	(63572065)	+	(TGGG)n	Simple_repeat	1	27	(0)	879761
44	13.7	1.2	2.3	chr12	69703297	69703381	(63571928)	+	GA-rich	Low_complexity	1	86	(0)	879762
362	27.6	14.2	8.6	chr12	69703455	69703638	(63571671)	C	Charlie22a	DNA/hAT-Charlie	(3)	488	273	879763
2361	10.3	0.0	0.3	chr12	69703639	69703948	(63571361)	+	AluSx3	SINE/Alu	3	311	(0)	879764
2393	21.0	3.0	1.8	chr12	79281791	79282280	(53993029)	C	MLT1D	LTR/ERVL-MaLR	(9)	496	1	893302
672	26.2	2.7	1.1	chr12	80408408	80408592	(52866717)	C	MIR	SINE/MIR	(3)	259	72	894977
15	0.0	0.0	0.0	chr12	80408616	80408634	(52866675)	+	(TGC)n	Simple_repeat	1	19	(0)	894978
182	9.9	0.7	0.3	chr12	80408635	80408919	(52866390)	+	(TCC)n	Simple_repeat	1	287	(0)	894979
947	18.5	1.2	0.0	chr12	80408924	80409080	(52866229)	C	AluJo	SINE/Alu	(17)	295	137	894980
2420	9.5	0.0	0.3	chr12	88563679	88563983	(44711326)	+	AluSq2	SINE/Alu	1	304	(9)	905666
287	31.2	8.2	0.9	chr12	94201019	94201131	(39074178)	C	L2b	LINE/L2	(8)	3367	3246	914853
365	25.6	14.0	0.6	chr12	94201443	94201615	(39073694)	C	MIR	SINE/MIR	(0)	262	63	914854
255	31.8	5.7	7.0	chr12	108906816	108906954	(24368355)	C	Tigger14a	DNA/TcMar-Tigger	(82)	242	97	941267
133	11.5	0.0	1.0	chr12	108907075	108907281	(24368028)	+	(CTC)n	Simple_repeat	1	207	(0)	941269
21	20.1	6.9	0.0	chr12	113031009	113031066	(20244243)	+	(CT)n	Simple_repeat	1	62	(0)	950624
183	29.6	10.2	4.3	chr12	124917751	124917842	(8357467)	+	AmnSINE1	SINE/5S-Deu-L2	387	484	(91)	977142
483	31.2	13.1	2.4	chr12	131425421	131425630	(1849679)	C	MIR	SINE/MIR	(0)	262	27	988101
4349	13.7	1.2	0.3	chr12	131425636	131426273	(1849036)	C	LTR9D	LTR/ERV1	(1)	644	1	988102
382	30.3	3.6	0.0	chr12	131432747	131432878	(1842431)	+	MER58B	DNA/hAT-Charlie	202	338	(3)	988114
268	29.1	16.7	0.6	chr12	131883714	131883879	(1391430)	+	L1ME2	LINE/L1	5571	5768	(396)	988755
672	26.0	5.5	1.5	chr12	131884612	131884873	(1390436)	+	L1ME2	LINE/L1	5883	6155	(9)	988755
298	27.1	7.9	1.4	chr12	132262105	132262246	(1013063)	+	MLT1D	LTR/ERVL-MaLR	84	235	(270)	989273
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
19	31.8	2.4	0.0	chr13	25468741	25468746	(88895582)	+	(GCGGCG)n	Simple_repeat	1	12	(72)	1001904
20	8.1	0.0	8.5	chr13	25468747	25468793	(88895535)	+	G-rich	Low_complexity	1	47	(0)	1001905
19	31.8	2.4	0.0	chr13	25468794	25468822	(88895506)	+	(GCGGCG)n	Simple_repeat	13	84	(0)	1001904
13	25.7	2.2	0.0	chr13	25468879	25468924	(88895404)	+	(CCGCCCG)n	Simple_repeat	1	47	(0)	1001906
264	28.6	0.1	0.4	chr13	35957907	35958600	(78405728)	+	(CAC)n	Simple_repeat	1	695	(0)	1017863
2924	15.4	19.1	0.5	chr13	38519166	38519757	(75844571)	+	LTR9A1	LTR/ERV1	1	728	(0)	1021350
2299	18.4	2.6	1.7	chr13	38519758	38519876	(75844452)	C	MSTB	LTR/ERVL-MaLR	(306)	120	2	1021349
4227	12.2	7.8	0.1	chr13	38904900	38905558	(75458770)	+	LTR9A1	LTR/ERV1	1	714	(14)	1021884
832	16.8	0.0	0.0	chr13	38905567	38905697	(75458631)	+	AluJb	SINE/Alu	166	296	(16)	1021883
9806	17.0	9.4	8.2	chr13	47958125	47960820	(66403508)	+	LOR1-int	LTR/ERV1	561	3322	(4798)	1036015
4399	8.0	1.4	0.4	chr13	48619101	48619663	(65744665)	+	MER61E	LTR/ERV1	1	569	(0)	1037109
313	19.6	0.0	0.0	chr13	48619664	48619714	(65744614)	C	Alu	SINE/Alu	(82)	51	1	1037110
2165	11.7	0.0	0.0	chr13	48619723	48620031	(65744297)	C	AluSx	SINE/Alu	(0)	312	1	1037111
2979	18.9	3.7	3.1	chr13	65458312	65458512	(48905816)	C	LTR9D	LTR/ERV1	(0)	645	451	1059841
2508	5.0	0.0	0.3	chr13	65458513	65458819	(48905509)	C	AluY	SINE/Alu	(0)	311	1	1059842
2282	8.5	3.4	2.0	chr13	66927216	66927562	(47436766)	+	L1PA13	LINE/L1	5812	6163	(0)	1061629
2073	17.4	1.0	3.0	chr13	66927563	66927899	(47436429)	C	MLT1B	LTR/ERVL-MaLR	(59)	331	1	1061628
13	26.4	0.0	3.8	chr13	71867035	71867087	(42497241)	+	G-rich	Low_complexity	1	53	(0)	1068021
1930	28.9	9.5	4.4	chr13	75958408	75959648	(38404680)	C	HAL1	LINE/L1	(723)	1784	475	1074111
14	17.7	9.6	0.0	chr13	76884132	76884183	(37480145)	+	(CCCTA)n	Simple_repeat	1	57	(0)	1075375
8727	3.7	0.1	0.2	chr13	85863229	85865082	(28499246)	C	L1PA4	LINE/L1	(0)	6155	4303	1087082
381	26.0	3.7	0.0	chr13	85865083	85865186	(28499142)	+	MLT1E1A	LTR/ERVL-MaLR	270	377	(277)	1087081
1656	22.7	2.1	0.3	chr13	85865194	85865564	(28498764)	+	L1MB8	LINE/L1	5503	5880	(298)	1087083
2741	15.5	5.2	5.3	chr13	90591899	90592436	(23771892)	+	MER61E	LTR/ERV1	1	612	(0)	1093110
2204	14.0	0.3	0.0	chr13	90592533	90592840	(23771488)	C	AluSz	SINE/Alu	(3)	309	1	1093111
906	28.0	8.7	5.0	chr13	91066713	91066873	(23297455)	C	MER21C	LTR/ERVL	(391)	547	375	1093725
4042	11.7	7.5	4.4	chr13	91066874	91067577	(23296751)	C	LTR9A1	LTR/ERV1	(0)	728	1	1093728
1865	27.4	9.4	0.9	chr13	97316001	97316981	(17047347)	+	L2a	LINE/L2	2352	3425	(1)	1102828
16	19.4	2.4	0.0	chr14	20971438	20971478	(86072240)	+	(CTCC)n	Simple_repeat	1	42	(0)	1128895
1158	25.4	4.4	7.0	chr14	22750818	22751215	(84292503)	C	LTR33A_	LTR/ERVL	(0)	531	145	1131631
1853	11.1	0.0	5.1	chr14	22751218	22751493	(84292225)	C	MER4B	LTR/ERV1	(0)	610	349	1131632
12	13.9	6.2	0.0	chr14	23551460	23551491	(83492227)	+	(CCCT)n	Simple_repeat	1	34	(0)	1133022
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
62	23.5	0.6	2.9	chr14	28767452	28767624	(78276094)	+	(CGC)n	Simple_repeat	1	174	(0)	1139694
13	35.4	2.1	2.1	chr14	28767705	28767797	(78275921)	+	(GGACGG)n	Simple_repeat	1	95	(0)	1139695
284	28.0	13.6	1.7	chr14	30306836	30307051	(76736667)	+	MIRc	SINE/MIR	4	265	(3)	1141642
102	19.8	0.5	1.8	chr14	37820856	37821056	(69222662)	+	(TCT)n	Simple_repeat	1	200	(0)	1153444
1112	22.2	5.2	12.5	chr14	48081740	48082074	(58961644)	+	MER61E	LTR/ERV1	257	565	(4)	1166354
4012	12.5	4.8	0.2	chr14	49553749	49554363	(57489355)	+	LTR9D	LTR/ERV1	1	645	(0)	1168133
869	21.6	12.1	11.0	chr14	49554364	49554515	(57489203)	+	LTR37A	LTR/ERV1	76	210	(216)	1168132
2516	7.8	0.0	0.0	chr14	49554516	49554822	(57488896)	+	AluY	SINE/Alu	1	307	(4)	1168134
3430	13.5	6.7	5.2	chr14	54353905	54354561	(52689157)	C	MER61F	LTR/ERV1	(8)	668	1	1175808
514	23.8	7.2	6.7	chr14	56666092	56666285	(50377433)	+	MLT1C	LTR/ERVL-MaLR	77	271	(196)	1179544
3381	10.8	5.9	0.6	chr14	56666304	56666833	(50376885)	+	MER61E	LTR/ERV1	6	565	(4)	1179545
242	15.9	0.0	0.0	chr14	56666838	56666881	(50376837)	+	MLT1C	LTR/ERVL-MaLR	424	467	(0)	1179544
427	29.6	10.3	8.0	chr14	56666898	56667172	(50376546)	+	L2c	LINE/L2	3105	3386	(1)	1179543
379	33.7	8.1	7.3	chr14	62738700	62739054	(44304664)	C	L2c	LINE/L2	(11)	3376	3019	1188232
30	5.5	0.0	0.0	chr14	68548294	68548331	(38495387)	+	(GCCCA)n	Simple_repeat	1	38	(0)	1197866
1348	17.7	8.6	12.6	chr14	69874115	69874502	(37169216)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	4	1200339
1216	26.4	10.7	1.2	chr14	69874626	69875039	(37168679)	+	MLT1J	LTR/ERVL-MaLR	11	468	(44)	1200340
187	22.2	0.0	0.0	chr14	70909794	70909829	(36133889)	+	L2a	LINE/L2	2501	2536	(883)	1201963
296	25.3	11.0	9.1	chr14	70909994	70910025	(36133693)	+	L2a	LINE/L2	2623	2654	(765)	1201963
191	4.1	0.0	0.5	chr14	70910026	70910230	(36133488)	+	(CTC)n	Simple_repeat	1	205	(0)	1201964
296	25.3	11.0	9.1	chr14	70910231	70910384	(36133334)	+	L2a	LINE/L2	2655	2813	(606)	1201963
4297	11.4	8.1	0.6	chr14	71782909	71783581	(35260137)	+	LTR9A1	LTR/ERV1	1	728	(0)	1203326
610	28.8	14.1	4.8	chr14	71783582	71783848	(35259870)	+	Charlie8	DNA/hAT-Charlie	194	487	(1941)	1203325
304	23.6	5.3	0.7	chr14	75210030	75210111	(31833607)	+	L2a	LINE/L2	3284	3416	(10)	1209954
697	30.4	10.1	6.5	chr14	75210141	75210569	(31833149)	+	L2c	LINE/L2	2935	3380	(7)	1209963
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
7798	2.2	0.0	0.0	chr14	80622302	80623469	(26420249)	+	L1PA3	LINE/L1	4985	6152	(3)	1219435
2734	23.9	5.1	4.5	chr14	92371005	92371778	(14671940)	+	LTR19C	LTR/ERV1	1	779	(0)	1237436
706	24.0	8.4	5.6	chr14	92371779	92371822	(14671896)	+	HAL1	LINE/L1	1619	1658	(849)	1237431
204	20.4	2.2	0.0	chr14	92371966	92372009	(14671709)	C	L2b	LINE/L2	(7)	3368	3324	1237437
38	23.2	5.4	3.4	chr14	100238902	100239067	(6804651)	+	(GAGGC)n	Simple_repeat	1	175	(0)	1251501
33	22.3	5.6	2.3	chr14	100239072	100239196	(6804522)	+	(CCCG)n	Simple_repeat	1	132	(0)	1251502
19	29.6	0.0	0.0	chr14	100239373	100239449	(6804269)	+	(CGACGG)n	Simple_repeat	1	77	(0)	1251503
33	2.9	0.0	0.0	chr14	100239451	100239485	(6804233)	+	(CCA)n	Simple_repeat	1	35	(0)	1251504
782	17.8	2.2	1.1	chr14	101607289	101607481	(5436237)	+	MSTD	LTR/ERVL-MaLR	1	194	(214)	1253394
416	9.4	5.4	1.0	chr14	101607484	101608224	(5435494)	+	(CTC)n	Simple_repeat	1	781	(0)	1253395
2230	11.7	1.6	0.0	chr14	102277341	102277640	(4766078)	+	AluSx	SINE/Alu	1	305	(7)	1254545
900	21.2	38.5	1.6	chr14	102277641	102277883	(4765835)	+	L1ME2	LINE/L1	5829	6172	(272)	1254543
30	3.1	0.0	0.0	chr14	104342231	104342263	(2701455)	+	(GGGGC)n	Simple_repeat	1	33	(0)	1258326
2228	21.6	16.8	0.8	chr15	30761329	30761939	(71229250)	C	LTR9A1	LTR/ERV1	(0)	728	1	1277579
2371	20.7	16.4	0.8	chr15	31643801	31644414	(70346775)	+	LTR9A1	LTR/ERV1	1	728	(0)	1278844
3177	14.1	8.1	0.2	chr15	44912880	44913467	(57077722)	C	MER61F	LTR/ERV1	(37)	639	1	1299744
3150	14.3	8.1	0.2	chr15	44979556	44980143	(57011046)	+	MER61F	LTR/ERV1	1	639	(37)	1299896
1081	29.4	7.8	2.2	chr15	49395295	49395707	(52595482)	+	L1MEg2	LINE/L1	3	440	(6012)	1306187
880	29.3	1.3	0.0	chr15	49395758	49395982	(52595207)	+	L1MEg2	LINE/L1	574	801	(5651)	1306187
1301	18.6	5.4	3.9	chr15	56018697	56019015	(45972174)	+	MER34C2	LTR/ERV1	219	629	(15)	1316576
431	21.1	0.0	0.0	chr15	56019037	56019112	(45972077)	C	Tigger17c	DNA/TcMar-Tigger	(1103)	85	10	1316578
2302	14.1	2.6	19.5	chr15	56019113	56019660	(45971529)	+	MLT2A2	LTR/ERVL	1	453	(0)	1316579
253	30.6	21.0	0.6	chr15	57375863	57376037	(44615152)	+	MIRb	SINE/MIR	33	255	(13)	1318604
219	15.8	2.6	0.0	chr15	57376004	57376041	(44615148)	+	L2a	LINE/L2	3375	3413	(13)	1318605
215	23.4	0.0	0.0	chr15	63121411	63121457	(38869732)	C	L2a	LINE/L2	(25)	3401	3355	1327995
20	23.1	0.0	3.3	chr15	63121643	63121702	(38869487)	+	GA-rich	Low_complexity	1	60	(0)	1327996
11	21.6	9.3	0.0	chr15	63121768	63121821	(38869368)	+	(CCGCGCC)n	Simple_repeat	1	59	(0)	1327997
252	28.5	8.5	11.9	chr15	67852883	67853085	(34138104)	+	L2c	LINE/L2	3139	3335	(52)	1337231
4212	11.3	9.2	1.2	chr15	67853086	67853199	(34137990)	C	LTR9A1	LTR/ERV1	(0)	728	621	1337232
2159	11.9	1.7	0.3	chr15	67853200	67853493	(34137696)	+	AluSc	SINE/Alu	1	298	(11)	1337233
1286	34.8	8.6	1.5	chr15	73636792	73637507	(28353682)	+	L2b	LINE/L2	607	1377	(2042)	1347436
3157	20.8	7.6	7.2	chr15	78176967	78177450	(23813739)	+	L1M5	LINE/L1	4468	4976	(1170)	1355367
306	28.6	15.8	1.3	chr15	78195512	78195667	(23795522)	+	MIRc	SINE/MIR	70	252	(16)	1355393
22	20.2	3.7	4.8	chr15	80404293	80404373	(21586816)	+	GA-rich	Low_complexity	1	84	(0)	1359476
19	26.2	1.2	5.8	chr15	80404332	80404417	(21586772)	+	(GGC)n	Simple_repeat	1	87	(0)	1359477
12	17.4	0.0	5.6	chr15	80404448	80404483	(21586706)	+	(CGCCC)n	Simple_repeat	1	36	(0)	1359478
15293	17.4	1.5	3.2	chr15	88969725	88970880	(13020309)	C	L1MA5A	LINE/L1	(3526)	4036	2890	1373332
1686	10.8	1.2	0.0	chr15	88970893	88971143	(13020046)	C	LTR12D	LTR/ERV1	(1000)	254	1	1373350
3277	14.1	12.8	1.8	chr15	89001103	89001718	(12989471)	+	LTR9A1	LTR/ERV1	1	694	(34)	1373428
1615	11.5	0.0	0.0	chr15	89001719	89001926	(12989263)	C	AluSg	SINE/Alu	(102)	208	1	1373429
177	13.1	2.1	2.3	chr15	89043447	89043778	(12947411)	+	GA-rich	Low_complexity	3	333	(0)	1373531
18	9.1	2.7	2.6	chr15	89043863	89043901	(12947288)	+	(TCTTTT)n	Simple_repeat	1	39	(0)	1373532
1245	21.2	7.9	6.0	chr15	92714100	92714481	(9276708)	+	L1MB3	LINE/L1	5796	6176	(7)	1380273
13	23.2	0.0	2.4	chr15	92714586	92714627	(9276562)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	1380277
16	16.8	0.0	0.0	chr15	96330806	96330833	(5660356)	+	(GT)n	Simple_repeat	1	28	(0)	1385726
2339	6.0	0.0	0.0	chr16	234079	234389	(90103956)	C	AluY	SINE/Alu	(0)	311	1	1394434
1014	26.2	9.4	2.2	chr16	5034049	5034500	(85303845)	C	L1MC4	LINE/L1	(0)	8042	7555	1402426
480	23.6	0.8	6.8	chr16	5034505	5034636	(85303709)	C	MER45A	DNA/hAT-Tip100	(5)	173	50	1402427
3797	13.8	7.0	1.7	chr16	5034826	5035034	(85303311)	C	MER61F	LTR/ERV1	(0)	676	472	1402428
2300	10.0	0.0	2.9	chr16	5035035	5035345	(85303000)	C	AluSq2	SINE/Alu	(11)	302	1	1402429
1640	13.4	1.2	3.4	chr16	10356506	10356767	(79981578)	C	AluJb	SINE/Alu	(51)	261	6	1413316
1576	21.6	14.5	6.0	chr16	10356919	10357483	(79980862)	C	LTR25	LTR/ERV1	(9)	835	215	1413317
2345	8.3	0.7	0.7	chr16	18790551	18790839	(71547506)	C	AluSc	SINE/Alu	(14)	295	7	1431958
16	16.0	2.9	0.0	chr16	24540383	24540417	(65797928)	+	(TCC)n	Simple_repeat	1	36	(0)	1444972
2286	10.6	0.3	0.3	chr16	28489775	28490075	(61848270)	+	AluSp	SINE/Alu	1	301	(12)	1453668
2280	11.4	0.0	0.9	chr16	28490161	28490475	(61847870)	+	AluSx	SINE/Alu	1	312	(0)	1453669
333	27.1	7.0	10.7	chr16	30921952	30922100	(59416245)	C	MIRb	SINE/MIR	(30)	238	96	1459204
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
14	23.0	0.0	0.0	chr16	30923682	30923733	(59414612)	+	(CCCCTTT)n	Simple_repeat	1	52	(0)	1459206
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
232	35.4	16.4	2.1	chr16	53729720	53730017	(36608328)	+	L2b	LINE/L2	3031	3355	(20)	1478325
852	19.1	0.0	3.0	chr16	58492559	58492726	(31845619)	C	AluJo	SINE/Alu	(31)	281	119	1487229
2943	14.5	2.7	4.0	chr16	64421142	64421672	(25916673)	C	L1PA15	LINE/L1	(3)	6162	5639	1496339
2795	15.6	0.4	7.3	chr16	64421712	64422245	(25916100)	C	MER61E	LTR/ERV1	(72)	497	1	1496340
2375	8.9	0.7	0.0	chr16	71989150	71989452	(18348893)	C	AluSx1	SINE/Alu	(7)	305	1	1510784
369	20.8	7.8	0.9	chr16	71989618	71989724	(18348621)	+	L4_A_Mam	LINE/RTE-X	4870	4984	(6)	1510785
27	19.8	0.0	0.0	chr16	73057536	73057584	(17280761)	+	A-rich	Low_complexity	1	49	(0)	1512336
3484	17.0	1.9	0.9	chr16	74867258	74867894	(15470451)	+	LTR9D	LTR/ERV1	1	728	(0)	1515625
478	24.8	5.6	0.0	chr16	74867903	74868019	(15470326)	C	L1MD2	LINE/L1	(532)	5827	5704	1515621
288	23.9	0.0	0.0	chr16	74868008	74868095	(15470250)	C	L1MEf	LINE/L1	(4118)	2082	1995	1515626
4120	13.5	7.7	0.6	chr17	3212693	3213368	(80044073)	C	LTR9A1	LTR/ERV1	(0)	728	1	1550720
44	0.0	0.0	0.0	chr17	7884696	7884735	(75372706)	+	(GAG)n	Simple_repeat	1	40	(0)	1559697
13	24.4	4.2	0.0	chr17	7884747	7884794	(75372647)	+	(GCGG)n	Simple_repeat	1	50	(0)	1559698
63	21.0	0.0	0.0	chr17	7884824	7884954	(75372487)	+	GA-rich	Low_complexity	1	131	(0)	1559699
42	7.5	0.0	0.0	chr17	7885026	7885081	(75372360)	+	(CCG)n	Simple_repeat	1	56	(0)	1559700
27	13.3	2.7	6.5	chr17	13636730	13636804	(69620637)	+	A-rich	Low_complexity	1	77	(0)	1570113
2740	17.1	9.6	1.2	chr17	13636858	13637447	(69619994)	C	LTR9D	LTR/ERV1	(0)	645	1	1570114
19	24.3	2.8	2.7	chr17	17752330	17752400	(65505041)	+	(GGCGG)n	Simple_repeat	1	73	(0)	1577284
2770	16.8	16.4	2.9	chr17	21513859	21514484	(61742957)	+	LTR9A1	LTR/ERV1	2	728	(0)	1584375
739	19.5	11.6	1.4	chr17	21514485	21514587	(61742854)	+	MER89	LTR/ERV1	343	466	(93)	1584374
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
35	12.3	1.6	1.5	chr17	37232859	37232922	(46024519)	+	(TCC)n	Simple_repeat	1	65	(0)	1605419
2314	10.7	0.0	0.0	chr17	51357236	51357535	(31899906)	C	AluSz	SINE/Alu	(11)	301	2	1633620
1169	22.2	1.3	2.2	chr17	54794228	54794326	(28463115)	+	MER58A	DNA/hAT-Charlie	1	98	(126)	1638553
2531	20.0	15.0	0.8	chr17	54794327	54794950	(28462491)	C	LTR9A1	LTR/ERV1	(0)	728	1	1638554
2809	19.3	3.1	2.1	chr17	55550293	55550921	(27706520)	C	LTR9D	LTR/ERV1	(0)	645	10	1639851
39	9.5	0.0	0.0	chr17	58756097	58756154	(24501287)	+	(GAACCC)n	Simple_repeat	1	58	(0)	1645698
25	27.6	0.0	0.0	chr17	58756225	58756298	(24501143)	+	GA-rich	Low_complexity	1	74	(0)	1645699
17	29.8	2.5	1.2	chr17	58756310	58756388	(24501053)	+	(GCCGCC)n	Simple_repeat	1	81	(0)	1645700
14	24.1	0.0	0.0	chr17	58756637	58756675	(24500766)	+	(CCCGCC)n	Simple_repeat	1	39	(0)	1645701
533	28.7	3.8	11.2	chr17	65099968	65100226	(18157215)	C	MIR	SINE/MIR	(15)	247	9	1657969
314	10.0	9.1	0.0	chr17	65100357	65100416	(18157025)	+	MADE1	DNA/TcMar-Mariner	1	66	(14)	1657970
50	23.1	0.8	0.8	chr17	65100533	65100655	(18156786)	+	(TCC)n	Simple_repeat	1	124	(0)	1657971
36	31.8	0.0	0.8	chr17	67826114	67826239	(15431202)	+	GA-rich	Low_complexity	1	126	(0)	1662903
12	5.5	0.0	0.0	chr17	67826262	67826280	(15431161)	+	(GAC)n	Simple_repeat	1	19	(0)	1662904
2676	20.3	9.6	6.3	chr17	68733722	68734473	(14522968)	+	LTR19C	LTR/ERV1	1	779	(0)	1664713
941	28.5	5.2	3.0	chr17	71764437	71764866	(11492575)	C	MLT1L	LTR/ERVL-MaLR	(4)	606	167	1669276
13	15.6	5.6	0.0	chr17	74326126	74326161	(8931280)	+	G-rich	Low_complexity	1	38	(0)	1673950
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
272	29.3	2.9	5.0	chr18	14929182	14929321	(65443964)	+	L2c	LINE/L2	3029	3165	(222)	1711019
35	6.7	3.0	2.9	chr18	26548249	26548314	(53824971)	+	(CTC)n	Simple_repeat	1	68	(0)	1721097
23	6.3	0.0	0.0	chr18	26548342	26548374	(53824911)	+	(CTC)n	Simple_repeat	1	33	(0)	1721097
14	11.7	0.0	3.3	chr18	28178573	28178602	(52194683)	+	(TTGTT)n	Simple_repeat	1	30	(0)	1723421
16	28.8	2.5	2.5	chr18	31684626	31684704	(48688581)	+	G-rich	Low_complexity	1	81	(0)	1728040
1792	21.9	18.7	7.7	chr18	31821645	31822323	(48550962)	+	LTR19C	LTR/ERV1	7	777	(2)	1728255
1007	13.8	0.0	0.0	chr18	31822324	31822461	(48550824)	+	AluJb	SINE/Alu	155	292	(20)	1728256
1981	13.9	11.5	1.6	chr18	33560623	33561014	(46812271)	C	MER61C	LTR/ERV1	(0)	428	4	1730886
24321	11.6	2.6	1.4	chr18	33561024	33561050	(46812235)	C	MER61-int	LTR/ERV1	(11)	5206	5159	1730886
94	0.0	0.0	0.0	chr18	33561051	33561132	(46812153)	+	(ATAAGG)n	Simple_repeat	1	82	(0)	1730887
24321	11.6	2.6	1.4	chr18	33561133	33563962	(46809323)	C	MER61-int	LTR/ERV1	(59)	5158	2307	1730886
1292	23.3	3.9	0.7	chr18	34115500	34115874	(46257411)	+	LTR9A1	LTR/ERV1	263	779	(0)	1731532
311	24.0	2.0	11.1	chr18	37251760	37251867	(43121418)	+	L2c	LINE/L2	3266	3363	(24)	1735809
659	20.9	2.0	2.6	chr18	40215615	40215763	(40157522)	C	LTR48B	LTR/ERV1	(0)	644	497	1739727
2958	16.1	0.8	3.7	chr18	40215764	40216311	(40156974)	C	MER61E	LTR/ERV1	(0)	728	1	1739728
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
2859	16.1	6.1	1.1	chr18	52792954	52793481	(27579804)	C	LTR9	LTR/ERV1	(56)	556	1	1758955
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2456	7.0	0.0	2.9	chr19	396067	396381	(58221235)	C	AluY	SINE/Alu	(0)	311	6	1796860
562	26.1	7.3	1.6	chr19	480035	480279	(58137337)	C	L2b	LINE/L2	(195)	3180	2921	1796988
1115	24.5	8.0	0.3	chr19	481733	481770	(58135846)	C	MER33	DNA/hAT-Charlie	(0)	324	287	1796993
1974	17.4	0.0	0.7	chr19	481771	482075	(58135541)	C	AluJr	SINE/Alu	(9)	303	1	1796994
1869	15.7	0.3	2.3	chr19	5534686	5534985	(53082631)	C	AluJr	SINE/Alu	(18)	294	1	1808284
2152	10.0	1.1	0.0	chr19	5795758	5796038	(52821578)	C	AluSx3	SINE/Alu	(27)	284	1	1808862
13	16.7	4.2	6.8	chr19	5796039	5796051	(52821565)	+	(TAATA)n	Simple_repeat	5	17	(0)	1808863
208	25.0	0.0	0.0	chr19	5796084	5796127	(52821489)	C	MIR	SINE/MIR	(10)	252	209	1808864
41	0.0	0.0	0.0	chr19	5796130	5796176	(52821440)	+	(TCT)n	Simple_repeat	1	47	(0)	1808865
1626	16.4	7.0	1.8	chr19	7884175	7884338	(50733278)	+	AluJo	SINE/Alu	134	302	(10)	1813906
123	25.4	3.4	3.9	chr19	7884339	7884429	(50733187)	+	GA-rich	Low_complexity	7	108	(321)	1813908
22	12.5	2.0	4.0	chr19	7884430	7884478	(50733138)	+	A-rich	Low_complexity	1	50	(0)	1813909
123	25.4	3.4	3.9	chr19	7884479	7884761	(50732855)	+	GA-rich	Low_complexity	109	429	(0)	1813908
1842	13.9	7.9	0.0	chr19	7884762	7885041	(50732575)	+	AluSg4	SINE/Alu	1	304	(6)	1813910
1355	16.1	5.0	1.0	chr19	8047014	8047321	(50570295)	+	L1M2	LINE/L1	2251	2571	(3572)	1814263
12	25.2	6.8	2.5	chr19	8378988	8379061	(50238555)	+	GA-rich	Low_complexity	1	79	(0)	1815184
13	13.2	0.0	0.0	chr19	8379085	8379109	(50238507)	+	(GGGA)n	Simple_repeat	1	25	(0)	1815185
5267	8.8	2.9	1.5	chr19	8379161	8379914	(50237702)	+	LTR12D	LTR/ERV1	370	1134	(120)	1815186
319	26.7	4.7	2.7	chr19	13234460	13234569	(45383047)	+	MIRb	SINE/MIR	114	233	(35)	1826214
4183	12.6	8.4	0.5	chr19	13652628	13653297	(44964319)	+	LTR9A1	LTR/ERV1	1	728	(0)	1827396
1680	17.7	9.5	12.2	chr19	13653298	13653313	(44964303)	C	MLT2B1	LTR/ERVL	(415)	105	102	1827395
1972	16.5	0.0	0.7	chr19	13653314	13653610	(44964006)	+	AluJr	SINE/Alu	1	295	(17)	1827397
271	21.1	9.0	1.1	chr19	14575538	14575625	(44041991)	+	MIRb	SINE/MIR	166	268	(0)	1829833
514	17.2	2.0	0.0	chr19	14575838	14575936	(44041680)	C	LTR9A1	LTR/ERV1	(0)	728	628	1829837
1084	15.0	1.2	0.0	chr19	14575937	14576096	(44041520)	C	AluSx	SINE/Alu	(5)	307	146	1829838
2022	12.2	3.4	0.3	chr19	14576108	14576394	(44041222)	C	AluSz	SINE/Alu	(16)	296	1	1829839
74	38.8	1.1	2.8	chr19	14595567	14596030	(44021586)	+	(TGA)n	Simple_repeat	1	469	(0)	1829894
396	26.8	4.7	6.6	chr19	14596239	14596347	(44021269)	+	MIRb	SINE/MIR	103	208	(60)	1829895
4031	14.3	8.9	0.1	chr19	16136440	16137103	(42480513)	+	LTR9A1	LTR/ERV1	1	728	(0)	1833193
339	32.9	3.8	5.6	chr19	16137104	16137223	(42480393)	+	MIR	SINE/MIR	86	201	(61)	1833192
13	23.7	1.6	6.3	chr19	16324576	16324637	(42292979)	+	G-rich	Low_complexity	1	63	(0)	1833721
12	20.8	0.0	2.9	chr19	16324656	16324690	(42292926)	+	(GCC)n	Simple_repeat	1	35	(0)	1833722
13	22.7	0.0	9.0	chr19	16325165	16325231	(42292385)	+	(CGCCGCC)n	Simple_repeat	1	67	(0)	1833723
14	8.2	0.0	3.6	chr19	17328498	17328525	(41289091)	+	(GCCGC)n	Simple_repeat	1	28	(0)	1836039
39	10.2	0.0	0.0	chr19	17328584	17328646	(41288970)	+	(CCT)n	Simple_repeat	1	63	(0)	1836040
19	22.3	3.0	2.9	chr19	17328664	17328729	(41288887)	+	(TCC)n	Simple_repeat	1	68	(0)	1836041
29	22.9	0.0	9.0	chr19	17328730	17328792	(41288824)	+	(CCCGCC)n	Simple_repeat	5	133	(0)	1836042
695	29.0	9.6	1.5	chr19	17778935	17779662	(40837954)	C	L2a	LINE/L2	(23)	3403	2474	1837257
3773	15.7	16.0	1.4	chr19	19709224	19709942	(38907674)	+	LTR25	LTR/ERV1	1	844	(0)	1841501
2148	10.4	1.4	2.1	chr19	21184068	21184356	(37433260)	+	AluSc	SINE/Alu	1	287	(22)	1843651
5098	17.1	1.3	0.2	chr19	21945796	21946630	(36670986)	+	LTR25	LTR/ERV1	1	844	(0)	1844728
19794	13.2	4.8	1.3	chr19	21946631	21950488	(36667128)	+	LTR25-int	LTR/ERV1	1	4127	(3061)	1844728
5139	17.0	1.9	0.4	chr19	22943608	22944438	(35673178)	+	LTR25	LTR/ERV1	1	844	(0)	1845956
28988	14.1	3.5	1.0	chr19	22944439	22948325	(35669291)	+	LTR25-int	LTR/ERV1	1	4127	(3061)	1845956
799	12.2	1.7	1.7	chr19	32972462	32972576	(25645040)	C	AluJo	SINE/Alu	(197)	115	1	1855840
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
19	31.0	0.0	1.4	chr19	38336494	38336564	(20281052)	+	G-rich	Low_complexity	1	71	(0)	1866435
1002	29.2	3.4	9.0	chr19	38450065	38450390	(20167226)	C	L2b	LINE/L2	(565)	2854	2524	1866685
3263	13.7	17.9	4.5	chr19	38450391	38451016	(20166600)	C	LTR9A1	LTR/ERV1	(0)	728	1	1866687
2370	7.9	0.7	0.7	chr19	43662216	43662518	(14955098)	+	AluSq2	SINE/Alu	1	303	(10)	1877357
477	30.9	12.1	4.1	chr19	43662519	43662720	(14954896)	+	L2c	LINE/L2	2821	3082	(305)	1877350
1662	13.3	9.8	0.7	chr19	43662721	43662990	(14954626)	C	AluJr	SINE/Alu	(15)	297	1	1877358
2084	6.3	5.6	0.4	chr19	45422490	45422760	(13194856)	+	AluSz	SINE/Alu	1	286	(26)	1881259
26	0.0	0.0	0.0	chr19	45422761	45422785	(13194831)	+	(AAAT)n	Simple_repeat	1	25	(0)	1881260
912	24.0	6.0	5.4	chr19	45422786	45422847	(13194769)	+	L2a	LINE/L2	3181	3233	(193)	1881258
396	34.1	0.9	4.5	chr19	45422848	45423071	(13194545)	C	MER102a	DNA/hAT-Charlie	(114)	216	1	1881261
249	30.8	7.5	5.2	chr19	45423072	45423243	(13194373)	C	MIR3	SINE/MIR	(37)	171	3	1881262
2055	10.0	4.3	0.0	chr19	47332563	47332853	(11284763)	C	AluSp	SINE/Alu	(9)	304	1	1885894
388	23.8	0.0	2.4	chr19	48900397	48900652	(9716964)	C	MSR1	Satellite	(0)	249	1	1889899
18	32.9	3.2	0.0	chr19	55283867	55283960	(3333656)	+	(CCCTCCC)n	Simple_repeat	1	97	(0)	1903384
17	34.5	0.0	0.0	chr19	55284033	55284098	(3333518)	+	G-rich	Low_complexity	1	66	(0)	1903385
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
241	31.3	4.2	4.2	chr19	55879053	55879172	(2738444)	+	MIRb	SINE/MIR	143	262	(6)	1904632
3425	13.4	13.9	3.5	chr19	55879175	55879824	(2737792)	C	LTR9A1	LTR/ERV1	(0)	728	1	1904633
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
545	34.4	4.6	0.3	chr19	57279572	57279886	(1337730)	+	L2a	LINE/L2	2201	2529	(890)	1907552
400	36.3	8.8	1.1	chr19	58181731	58182087	(435529)	+	L1M5	LINE/L1	4061	4447	(1699)	1909056
4104	12.3	7.6	4.0	chr2	24776957	24777441	(217416088)	C	LTR9A1	LTR/ERV1	(0)	728	212	1946713
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
305	25.6	12.2	0.0	chr2	40464472	40464557	(201728972)	+	LTR78B	LTR/ERV1	288	385	(911)	1972622
12	15.3	2.4	7.0	chr2	42493992	42494033	(199699496)	+	(CGG)n	Simple_repeat	1	43	(0)	1975681
1611	31.6	9.5	1.6	chr2	46435381	46436207	(195757322)	C	L4_A_Mam	LINE/RTE-X	(187)	4803	3905	1982252
2102	21.2	12.7	6.5	chr2	63615039	63615760	(178577769)	+	LTR19C	LTR/ERV1	7	779	(0)	2008097
22	3.6	0.0	0.0	chr2	64750746	64750774	(177442755)	+	(GAG)n	Simple_repeat	1	29	(0)	2009875
18	6.3	2.7	5.3	chr2	64750840	64750876	(177442653)	+	(GGC)n	Simple_repeat	1	38	(0)	2009876
296	38.0	4.2	3.9	chr2	69800430	69800738	(172392791)	C	L2c	LINE/L2	(47)	3340	3031	2017773
3297	16.5	11.0	3.0	chr2	69800776	69801396	(172392133)	C	LTR9A1	LTR/ERV1	(0)	728	47	2017774
3665	14.2	13.2	0.8	chr2	74191601	74192237	(168001292)	+	LTR9A1	LTR/ERV1	1	728	(0)	2024967
1616	15.1	5.8	3.0	chr2	74192238	74192296	(168001233)	C	AluJb	SINE/Alu	(146)	166	111	2024966
4678	9.8	0.1	6.1	chr2	74192297	74192666	(168000863)	C	MER4A	LTR/ERV1	(0)	664	319	2024968
180	10.5	0.4	0.0	chr2	74561018	74561280	(167632249)	+	(AGG)n	Simple_repeat	1	264	(0)	2025560
13	7.2	3.0	5.9	chr2	74561306	74561338	(167632191)	+	(CTCAT)n	Simple_repeat	1	34	(0)	2025561
2118	11.2	0.3	2.3	chr2	88061665	88061967	(154131562)	C	AluSq	SINE/Alu	(16)	297	1	2045217
3290	16.4	13.5	1.7	chr2	88062019	88062631	(154130898)	C	LTR9A1	LTR/ERV1	(0)	728	30	2045218
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
616	15.3	8.3	0.0	chr2	97664455	97664565	(144528964)	C	FLAM_A	SINE/Alu	(10)	132	12	2053940
15	26.0	6.6	1.2	chr2	99772119	99772194	(142421335)	+	GA-rich	Low_complexity	1	81	(0)	2056966
1928	23.9	7.2	6.8	chr2	100359920	100360466	(141833063)	+	L1MDa	LINE/L1	1861	2395	(4345)	2057765
3555	18.0	2.3	1.1	chr2	100360467	100361074	(141832455)	C	LTR9D	LTR/ERV1	(1)	644	28	2057775
54	31.4	1.4	1.4	chr2	103361756	103361906	(138831623)	+	(TCC)n	Simple_repeat	1	153	(0)	2062223
64	8.0	0.0	2.1	chr2	103361907	103362003	(138831526)	+	(CCT)n	Simple_repeat	1	97	(0)	2062224
54	31.4	1.4	1.4	chr2	103362004	103362068	(138831461)	+	(TCC)n	Simple_repeat	1	63	(0)	2062225
2039	11.9	4.5	0.0	chr2	103362073	103362367	(138831162)	C	AluSx1	SINE/Alu	(2)	310	2	2062226
2948	22.3	4.0	7.3	chr2	107673079	107674042	(134519487)	C	L1MC2	LINE/L1	(4849)	1902	751	2068180
3578	16.9	4.8	0.0	chr2	107674043	107674656	(134518873)	C	LTR9D	LTR/ERV1	(0)	645	1	2068187
468	21.6	8.6	2.6	chr2	112541561	112541712	(129651817)	+	L1ME1	LINE/L1	6015	6176	(3)	2075273
685	18.8	2.4	3.8	chr2	118027548	118027845	(124165684)	C	MER101-int	LTR/ERV1	(4134)	989	678	2083064
343	22.6	3.6	7.8	chr2	118027863	118027928	(124165601)	C	MER101-int	LTR/ERV1	(4821)	535	474	2083064
3313	16.9	12.9	0.6	chr2	118027929	118028566	(124164963)	C	LTR9A1	LTR/ERV1	(0)	728	1	2083073
778	23.0	1.7	0.6	chr2	120275425	120275599	(121917930)	+	MER5B	DNA/hAT-Charlie	2	178	(0)	2086701
519	28.6	13.2	10.5	chr2	120275600	120275716	(121917813)	C	L1MEd	LINE/L1	(6987)	99	2	2086700
2625	19.6	13.7	2.5	chr2	120275747	120276318	(121917211)	C	LTR9A1	LTR/ERV1	(0)	728	70	2086702
43	25.2	5.0	3.3	chr2	127407870	127408069	(114785460)	+	(CCTCCT)n	Simple_repeat	1	210	(0)	2097395
20263	12.1	5.1	3.5	chr2	130982290	130982557	(111210972)	C	LOR1-int	LTR/ERV1	(5886)	2234	1989	2102634
34	7.8	1.8	1.7	chr2	130982558	130982614	(111210915)	+	(CCT)n	Simple_repeat	1	58	(0)	2102639
20263	12.1	5.1	3.5	chr2	130982615	130983638	(111209891)	C	LOR1-int	LTR/ERV1	(6132)	1988	957	2102634
3313	16.5	6.3	0.2	chr2	137775342	137775948	(104417581)	C	MER39B	LTR/ERV1	(0)	653	7	2112507
489	28.0	12.5	4.2	chr2	148835708	148836272	(93357257)	+	L2a	LINE/L2	2799	3426	(0)	2127224
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
261	25.4	8.8	9.5	chr2	170102089	170102215	(72091314)	C	L1ME3A	LINE/L1	(110)	6052	5927	2156151
19	25.0	1.2	5.8	chr2	173963715	173963799	(68229730)	+	(GGCGGC)n	Simple_repeat	1	86	(0)	2162453
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
1486	17.1	0.8	1.2	chr2	186893951	186894196	(55299333)	+	AluSz	SINE/Alu	2	246	(66)	2179673
3686	11.4	14.6	0.6	chr2	186894197	186894822	(55298707)	C	LTR9A1	LTR/ERV1	(0)	728	1	2179674
17807	14.0	2.4	1.8	chr2	193026277	193027576	(49165953)	+	L1MA2	LINE/L1	3755	5058	(2507)	2187947
3765	14.7	3.0	0.2	chr2	193027577	193028201	(49165328)	C	LTR9D	LTR/ERV1	(2)	643	1	2187949
381	29.0	8.0	2.2	chr2	218216534	218216734	(23976795)	+	L2c	LINE/L2	3152	3387	(0)	2225667
512	19.1	3.0	1.9	chr2	219968608	219968748	(22224781)	+	MLT1H	LTR/ERVL-MaLR	21	150	(399)	2228792
276	26.7	14.1	5.3	chr2	219968915	219969159	(22224370)	+	L2b	LINE/L2	3077	3346	(29)	2228793
520	19.8	3.1	2.0	chr2	240147000	240147415	(2046114)	+	(TG)n	Simple_repeat	1	438	(890)	2259744
14	7.5	3.3	3.2	chr2	240147416	240147445	(2046084)	+	(GGGTG)n	Simple_repeat	1	31	(0)	2259745
520	19.8	3.1	2.0	chr2	240147446	240148287	(2045242)	+	(TG)n	Simple_repeat	439	1328	(0)	2259744
3858	13.1	1.4	6.9	chr20	16462629	16463311	(47980856)	+	LTR9D	LTR/ERV1	1	645	(0)	2289387
293	24.7	4.7	0.0	chr20	16463430	16463510	(47980657)	+	Charlie2a	DNA/hAT-Charlie	1463	1547	(1314)	2289388
391	26.8	1.6	0.8	chr20	18739082	18739209	(45704958)	+	MER102c	DNA/hAT-Charlie	203	331	(0)	2293164
13	20.6	6.7	0.0	chr20	25217798	25217842	(39226325)	+	(CCTCT)n	Simple_repeat	1	48	(0)	2301853
22	7.3	2.0	7.7	chr20	25217966	25218016	(39226151)	+	(CCT)n	Simple_repeat	1	52	(0)	2301854
20	9.8	2.0	7.7	chr20	25218052	25218102	(39226065)	+	(CCT)n	Simple_repeat	1	52	(0)	2301854
200	32.9	7.9	0.0	chr20	25218296	25218377	(39225790)	+	L2b	LINE/L2	3283	3371	(4)	2301855
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1283	22.6	10.6	6.4	chr20	34317604	34318014	(30126153)	C	MLT1G3	LTR/ERVL-MaLR	(55)	540	102	2312764
2395	16.3	1.9	2.5	chr20	34318018	34318086	(30126081)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	363	2312767
3508	13.3	13.5	0.6	chr20	34318087	34318720	(30125447)	C	LTR9A1	LTR/ERV1	(0)	728	1	2312768
3053	18.2	4.5	2.4	chr20	46683147	46683776	(17760391)	+	LTR9D	LTR/ERV1	1	644	(1)	2338214
524	26.8	16.2	1.4	chr20	46683839	46684122	(17760045)	+	L2a	LINE/L2	2671	3004	(415)	2338215
634	27.1	13.9	1.3	chr20	56710238	56710469	(7733698)	+	MLT1J	LTR/ERVL-MaLR	48	313	(199)	2359671
87	42.3	0.3	3.8	chr20	62421200	62421932	(2022235)	+	(GT)n	Simple_repeat	1	735	(0)	2368540
16	21.6	5.9	2.8	chr20	62804696	62804763	(1639404)	+	G-rich	Low_complexity	1	72	(0)	2368970
29	27.8	0.9	3.5	chr20	62804889	62805000	(1639167)	+	GA-rich	Low_complexity	1	113	(0)	2368971
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1600	19.0	4.3	13.1	chr21	9158641	9159130	(37550853)	+	MER65A	LTR/ERV1	1	445	(0)	2374298
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
470	28.8	8.4	1.6	chr21	34510344	34510678	(12199305)	+	L2a	LINE/L2	2888	3240	(186)	2406754
402	20.2	1.1	0.0	chr21	41765772	41765865	(4944118)	C	Zaphod3	DNA/hAT-Tip100	(2306)	317	223	2417969
2373	10.2	0.0	0.0	chr22	11616593	11616897	(39201571)	C	AluYk3	SINE/Alu	(4)	307	3	2425260
643	22.0	0.5	0.4	chr22	11616898	11617618	(39200850)	+	(TCTC)n	Simple_repeat	2	722	(0)	2425261
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
15	17.3	7.7	0.0	chr22	18528605	18528643	(32289825)	+	(GC)n	Simple_repeat	1	42	(0)	2430648
15	12.0	4.5	10.0	chr22	18528644	18528667	(32289801)	+	(GGAGCGC)n	Simple_repeat	5	70	(0)	2430649
12	29.8	5.1	0.0	chr22	18528716	18528774	(32289694)	+	G-rich	Low_complexity	1	62	(0)	2430650
16	10.1	2.9	2.9	chr22	18528813	18528846	(32289622)	+	(GCA)n	Simple_repeat	1	35	(0)	2430651
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
12	29.8	5.1	0.0	chr22	20702743	20702801	(30115667)	+	G-rich	Low_complexity	1	62	(0)	2433781
13	8.1	3.6	3.5	chr22	20702840	20702867	(30115601)	+	(GCA)n	Simple_repeat	1	29	(0)	2433782
16	10.1	2.9	2.9	chr22	21468148	21468181	(29350287)	+	(GCA)n	Simple_repeat	1	35	(0)	2435227
327	23.9	14.8	0.9	chr22	37661632	37661741	(13156727)	+	L2a	LINE/L2	3297	3424	(2)	2467758
1266	13.2	0.0	1.6	chr22	37661893	37662115	(13156353)	C	AluSx1	SINE/Alu	(0)	312	127	2467759
311	30.6	12.2	2.7	chr22	38461169	38461390	(12357078)	C	MIRc	SINE/MIR	(18)	250	5	2469550
513	16.7	2.1	10.4	chr22	38461872	38461929	(12356539)	C	L1ME3	LINE/L1	(1)	6161	6112	2469551
24	30.9	0.0	1.3	chr22	39546344	39546420	(11272048)	+	(TG)n	Simple_repeat	1	77	(0)	2471867
1922	11.2	0.4	0.4	chr22	40715845	40716111	(10102357)	C	AluSz6	SINE/Alu	(10)	302	36	2474180
524	31.4	4.0	3.5	chr22	40716203	40716400	(10102068)	C	L2a	LINE/L2	(3)	3423	3225	2474181
2352	10.8	0.3	0.0	chr22	40716434	40716739	(10101729)	+	AluSp	SINE/Alu	2	308	(5)	2474182
17	9.4	2.6	5.1	chr22	41092447	41092484	(9725984)	+	(GCG)n	Simple_repeat	1	39	(0)	2475139
14	25.3	1.8	3.6	chr22	41092589	41092643	(9725825)	+	GA-rich	Low_complexity	1	56	(0)	2475140
12	21.7	0.0	0.0	chr22	41092658	41092689	(9725779)	+	(GGCCG)n	Simple_repeat	1	32	(0)	2475141
3947	13.0	9.3	0.9	chr22	45401206	45401871	(5416597)	+	LTR9A1	LTR/ERV1	1	728	(0)	2483841
8314	16.8	5.8	5.4	chr22	45401872	45401889	(5416579)	+	L1MC3	LINE/L1	7713	7718	(67)	2483840
2454	7.5	0.0	0.0	chr22	45401890	45402182	(5416286)	C	AluY	SINE/Alu	(18)	293	1	2483842
13	12.3	0.0	9.3	chr22	49918445	49918487	(899981)	+	G-rich	Low_complexity	1	43	(0)	2489962
2335	9.2	0.3	0.0	chr22	49940682	49940973	(877495)	C	AluSp	SINE/Alu	(20)	293	1	2489993
2210	17.8	16.6	14.6	chr22	49940974	49941097	(877371)	+	LTR9A1	LTR/ERV1	606	727	(1)	2489988
1934	24.3	8.2	5.4	chr3	20305685	20306399	(177989160)	+	LTR19C	LTR/ERV1	1	779	(0)	2525987
2801	24.1	8.0	3.0	chr3	20306440	20307403	(177988156)	C	L1MC5	LINE/L1	(5)	9299	8284	2525988
233	33.5	6.8	1.0	chr3	37794122	37794329	(160501230)	C	MIRb	SINE/MIR	(47)	221	1	2552082
280	32.6	0.0	1.1	chr3	37794605	37794697	(160500862)	+	MIRb	SINE/MIR	163	254	(14)	2552083
11	18.3	5.0	2.4	chr3	37907527	37907566	(160387993)	+	(GGAGGAGT)n	Simple_repeat	1	42	(0)	2552250
802	30.2	7.8	2.9	chr3	37907572	37907987	(160387572)	+	L1ME5	LINE/L1	5755	6192	(2)	2552251
373	27.4	7.8	3.0	chr3	42772835	42773074	(155522485)	+	MIRc	SINE/MIR	2	259	(9)	2559634
16	26.7	0.0	3.5	chr3	49470325	49470381	(148825178)	+	(GGC)n	Simple_repeat	1	57	(0)	2571453
36	4.9	0.0	0.0	chr3	51385311	51385352	(146910207)	+	(GGA)n	Simple_repeat	1	42	(0)	2574229
19	10.4	0.0	0.0	chr3	51385525	51385556	(146910003)	+	(GAGGGC)n	Simple_repeat	1	32	(0)	2574230
1135	35.4	6.9	1.0	chr3	54888996	54889708	(143405851)	C	L2b	LINE/L2	(257)	3118	2365	2579666
31	0.0	0.0	0.0	chr3	57821913	57821941	(140473618)	+	(TCC)n	Simple_repeat	1	29	(0)	2584731
2763	12.5	25.1	4.7	chr3	66596992	66597563	(131697996)	+	LTR9A1	LTR/ERV1	1	728	(0)	2599498
725	19.5	4.2	5.9	chr3	66597564	66597602	(131697957)	+	LTR16C	LTR/ERVL	203	237	(252)	2599497
3411	15.7	15.0	0.6	chr3	67263706	67264328	(131031231)	+	LTR9A1	LTR/ERV1	1	728	(0)	2600570
27	0.0	0.0	0.0	chr3	67264496	67264521	(131031038)	+	(TTTCT)n	Simple_repeat	1	26	(0)	2600571
11013	2.7	0.0	0.0	chr3	67264522	67266565	(131028994)	C	L1PA3	LINE/L1	(7)	6148	4105	2600572
405	33.2	10.6	2.2	chr3	70990832	70991044	(127304515)	+	MIRb	SINE/MIR	16	251	(17)	2606565
3040	16.4	0.4	2.6	chr3	83934488	83935024	(114360535)	+	MER61E	LTR/ERV1	1	525	(44)	2625170
2451	28.2	9.1	5.7	chr3	83935032	83936038	(114359521)	+	MLT-int	LTR/ERVL-MaLR	264	1308	(427)	2625174
36	25.1	0.0	1.0	chr3	84958994	84959090	(113336469)	+	(GCCGCC)n	Simple_repeat	1	97	(0)	2626424
3955	14.7	8.1	0.7	chr3	88189891	88190564	(110104995)	+	LTR9A1	LTR/ERV1	1	728	(0)	2630500
13	8.9	0.0	3.9	chr3	98593139	98593164	(99702395)	+	(CTC)n	Simple_repeat	1	26	(0)	2639139
563	25.7	13.9	3.1	chr3	100523385	100523613	(97771946)	C	L2c	LINE/L2	(0)	3387	3130	2641843
112	16.6	0.0	2.3	chr3	100523635	100523848	(97771711)	+	(CTC)n	Simple_repeat	1	214	(0)	2641844
563	30.6	8.4	4.2	chr3	101530029	101530222	(96765337)	+	LTR84b	LTR/ERVL	1	208	(553)	2643121
3595	16.9	6.5	4.2	chr3	101530223	101530982	(96764577)	C	LTR19C	LTR/ERV1	(0)	779	1	2643122
3696	12.8	6.8	0.7	chr3	112321836	112322433	(85973126)	+	MER61F	LTR/ERV1	3	639	(37)	2657642
1813	16.4	3.2	4.0	chr3	113829734	113829848	(84465711)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	237	2659842
4125	12.0	8.2	0.5	chr3	113829849	113830519	(84465040)	C	LTR9A1	LTR/ERV1	(0)	728	1	2659843
2165	12.8	0.0	0.7	chr3	129831861	129832156	(68463403)	C	AluSx1	SINE/Alu	(18)	294	1	2684479
18	24.4	0.0	8.1	chr3	129832305	129832390	(68463169)	+	A-rich	Low_complexity	1	86	(0)	2684480
3746	13.8	13.1	0.3	chr3	155835332	155835965	(42459594)	+	LTR9A1	LTR/ERV1	2	728	(0)	2723094
20	13.3	0.0	2.3	chr3	155835990	155836002	(42459557)	+	A-rich	Low_complexity	1	13	(0)	2723095
2451	9.3	0.0	0.3	chr3	155836003	155836312	(42459247)	+	AluSc	SINE/Alu	1	309	(0)	2723096
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
1152	27.9	9.3	3.6	chr3	159375845	159376349	(38919210)	+	Tigger10	DNA/TcMar-Tigger	1247	1783	(61)	2728171
691	20.5	1.5	0.5	chr3	168845034	168846504	(29449055)	+	(CTCCTC)n	Simple_repeat	1	1493	(0)	2740610
19	18.5	4.0	0.0	chr3	169149773	169149824	(29145735)	+	(TCATTA)n	Simple_repeat	1	54	(0)	2740989
520	32.6	4.5	10.6	chr3	169478968	169479564	(28815995)	C	L2b	LINE/L2	(2)	3373	2846	2741365
23	0.0	0.0	0.0	chr3	169479653	169479677	(28815882)	+	(A)n	Simple_repeat	1	25	(0)	2741366
1902	18.1	0.4	0.2	chr3	183620904	183621224	(14674335)	C	MER74A	LTR/ERVL	(71)	487	91	2763042
410	12.9	0.0	1.6	chr3	183621225	183621287	(14674272)	+	MER61D	LTR/ERV1	2	63	(438)	2763044
417	18.8	0.0	0.0	chr3	183621283	183621351	(14674208)	+	LTR25	LTR/ERV1	286	354	(490)	2763045
816	21.5	2.1	1.6	chr3	183621329	183621517	(14674042)	+	LTR25	LTR/ERV1	655	844	(0)	2763045
629	26.5	5.0	0.0	chr3	183621518	183621649	(14673910)	C	MER74A	LTR/ERVL	(389)	169	31	2763046
777	10.7	3.8	3.0	chr3	183699432	183699562	(14595997)	+	FLAM_C	SINE/Alu	1	132	(11)	2763199
1059	28.4	16.1	3.2	chr3	183699563	183699872	(14595687)	C	L2	LINE/L2	(1077)	2342	2001	2763198
318	18.4	13.9	2.5	chr3	183699996	183700158	(14595401)	C	L1ME3G	LINE/L1	(659)	5533	5394	2763200
1050	14.4	0.0	3.0	chr3	185665021	185665187	(12630372)	+	AluJr	SINE/Alu	139	300	(12)	2766854
268	14.6	0.2	0.2	chr3	185665188	185665627	(12629932)	+	GA-rich	Low_complexity	3	442	(0)	2766855
527	26.5	5.3	8.1	chr3	185665634	185665684	(12629875)	+	L1ME4a	LINE/L1	1651	1693	(4803)	2766856
2252	10.3	0.0	0.0	chr3	185665685	185665966	(12629593)	+	AluSz6	SINE/Alu	1	282	(30)	2766857
2938	13.2	22.1	0.9	chr3	190361622	190361996	(7933563)	+	LTR9A1	LTR/ERV1	1	460	(268)	2774985
50	1.9	1.9	0.0	chr3	190361997	190362050	(7933509)	+	(ACCTGGTCTA)n	Simple_repeat	1	55	(0)	2774986
2938	13.2	22.1	0.9	chr3	190362051	190362246	(7933313)	+	LTR9A1	LTR/ERV1	461	727	(1)	2774985
3118	19.2	1.4	7.7	chr3	190362247	190362648	(7932911)	+	LTR8	LTR/ERV1	313	691	(0)	2774984
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
25	24.2	2.9	4.7	chr4	4859276	4859378	(185355177)	+	GA-rich	Low_complexity	1	106	(0)	2795607
13	23.9	0.0	2.4	chr4	4859480	4859520	(185355035)	+	(CCCCT)n	Simple_repeat	1	41	(0)	2795608
585	24.4	4.6	1.4	chr4	6660040	6660272	(183554283)	C	MER67A	LTR/ERV1	(0)	543	273	2798829
535	28.5	2.8	1.7	chr4	6660242	6660416	(183554139)	C	MER67A	LTR/ERV1	(306)	405	229	2798829
235	15.4	0.0	1.2	chr4	6660429	6660840	(183553715)	+	GA-rich	Low_complexity	1	412	(0)	2798830
2151	10.6	0.0	0.0	chr4	6660847	6661139	(183553416)	C	AluSc	SINE/Alu	(16)	293	1	2798831
962	25.2	32.8	2.3	chr4	41470163	41470814	(148743741)	+	L2	LINE/L2	1427	2301	(1118)	2854125
1273	17.1	3.6	3.6	chr4	48961126	48961168	(141253387)	C	MER4D1	LTR/ERV1	(0)	664	623	2864715
4584	10.9	8.9	0.1	chr4	48961169	48961832	(141252723)	C	LTR9A1	LTR/ERV1	(0)	728	1	2864716
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
15	8.5	0.0	0.0	chr4	51843656	51843680	(138370875)	+	(GAGC)n	Simple_repeat	1	25	(0)	2865385
12	19.6	2.9	0.0	chr4	72428153	72428187	(117786368)	+	(GAAGTT)n	Simple_repeat	1	36	(0)	2893499
248	13.6	0.2	0.0	chr4	73788114	73788507	(116426048)	+	(AGG)n	Simple_repeat	1	395	(0)	2895345
4500	11.3	8.9	1.6	chr4	88273706	88274168	(101940387)	+	LTR9A1	LTR/ERV1	212	728	(0)	2916865
308	25.7	8.2	1.0	chr4	88274198	88274299	(101940256)	+	MamTip2	DNA/hAT-Tip100	113	222	(83)	2916867
24	19.2	0.0	1.8	chr4	89837163	89837217	(100377338)	+	(TCC)n	Simple_repeat	1	55	(0)	2919194
204	36.4	8.4	6.7	chr4	93407375	93407583	(96806972)	C	AmnSINE2	SINE/tRNA-Deu	(88)	270	58	2923605
139	6.8	0.0	0.0	chr4	93407703	93407872	(96806683)	+	(CTC)n	Simple_repeat	1	170	(0)	2923606
1933	15.2	0.3	4.0	chr4	96266420	96266741	(93947814)	C	AluSx	SINE/Alu	(2)	310	1	2927454
700	19.6	3.0	2.7	chr4	96266742	96266908	(93947647)	C	LTR19C	LTR/ERV1	(0)	779	637	2927455
925	14.4	0.6	0.6	chr4	96266902	96267062	(93947493)	C	LTR9A1	LTR/ERV1	(567)	161	1	2927456
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
11480	11.0	11.6	6.8	chr4	107890692	107891485	(82323070)	C	MER4-int	LTR/ERV1	(5379)	1219	263	2942660
3460	12.6	15.9	0.3	chr4	107891486	107892099	(82322456)	C	LTR9A1	LTR/ERV1	(0)	728	1	2942663
15	17.5	3.1	0.0	chr4	110637577	110637608	(79576947)	+	(GT)n	Simple_repeat	1	33	(0)	2946881
16	0.0	0.0	0.0	chr4	113980213	113980229	(76234326)	+	(T)n	Simple_repeat	1	17	(0)	2951528
35	19.4	1.0	4.1	chr4	124470297	124470392	(65744163)	+	(CTTCTTT)n	Simple_repeat	1	97	(0)	2965314
126	6.4	1.0	3.1	chr4	124470395	124470587	(65743968)	+	(CTTC)n	Simple_repeat	1	195	(0)	2965315
21	28.7	4.8	3.9	chr4	124470588	124470612	(65743943)	+	(CTCT)n	Simple_repeat	1	25	(0)	2965316
56	2.6	4.9	2.3	chr4	124470613	124470694	(65743861)	+	(TCTT)n	Simple_repeat	1	86	(0)	2965317
1567	17.8	0.4	3.9	chr4	141785516	141785801	(48428754)	+	AluJb	SINE/Alu	37	312	(0)	2988135
1673	26.6	8.6	2.5	chr4	141785802	141785948	(48428607)	+	Kanga1c	DNA/TcMar-Tc2	230	383	(346)	2988134
51	6.6	3.8	0.0	chr4	141785949	141786027	(48428528)	+	(TCC)n	Simple_repeat	1	82	(0)	2988136
1673	26.6	8.6	2.5	chr4	141786028	141786310	(48428245)	+	Kanga1c	DNA/TcMar-Tc2	384	675	(54)	2988134
5289	11.2	3.2	4.8	chr4	158642156	158642732	(31571823)	C	L1MA5A	LINE/L1	(2)	6295	5711	3011659
4076	13.8	1.4	0.5	chr4	158642733	158643371	(31571184)	C	LTR9D	LTR/ERV1	(0)	645	1	3011660
265	23.9	16.9	1.4	chr4	182834615	182834754	(7379801)	C	LTR33A	LTR/ERVL	(607)	188	23	3043948
2428	10.2	0.0	1.0	chr4	183850447	183850760	(6363795)	+	AluSx1	SINE/Alu	1	311	(1)	3045713
2557	16.2	16.4	7.0	chr4	185473265	185473919	(4740636)	+	LTR9A1	LTR/ERV1	1	728	(0)	3048343
587	19.2	6.5	3.4	chr4	185473920	185474010	(4740545)	C	Zaphod2	DNA/hAT-Tip100	(433)	3091	3002	3048340
1356	24.6	9.2	5.0	chr4	185474026	185474680	(4739875)	C	Zaphod2	DNA/hAT-Tip100	(2839)	685	1	3048344
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
11	14.4	7.5	2.3	chr5	344074	344113	(181194146)	+	G-rich	Low_complexity	1	43	(0)	3055345
13	19.6	2.9	0.0	chr5	344255	344289	(181193970)	+	(GGC)n	Simple_repeat	1	36	(0)	3055346
345	27.8	1.8	2.3	chr5	344349	345312	(181192947)	+	(GT)n	Simple_repeat	1	962	(0)	3055347
240	13.5	0.0	0.0	chr5	1571119	1571155	(179967104)	C	MER1B	DNA/hAT-Charlie	(210)	129	93	3056370
709	20.3	2.5	0.0	chr5	1571245	1571402	(179966857)	C	MER1B	DNA/hAT-Charlie	(360)	169	1	3056371
442	26.5	12.2	0.7	chr5	3275960	3276111	(178262148)	C	LTR16B2	LTR/ERVL	(4)	458	287	3058181
60	15.6	0.0	1.8	chr5	5416924	5417036	(176121223)	+	GA-rich	Low_complexity	1	113	(0)	3060543
2342	8.6	0.3	4.9	chr5	14105455	14105781	(167432478)	+	AluSp	SINE/Alu	1	312	(1)	3071787
4015	13.8	8.1	0.5	chr5	21845785	21846456	(159691803)	+	LTR9A1	LTR/ERV1	1	728	(0)	3082587
1644	16.6	0.0	1.0	chr5	24718968	24719277	(156818982)	C	L1MA7	LINE/L1	(0)	6291	5985	3086430
1523	25.1	6.2	12.4	chr5	24909352	24909788	(156628471)	+	MER77	LTR/ERVL	24	426	(178)	3086677
1410	25.0	2.8	1.4	chr5	24909789	24910145	(156628114)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	4	3086678
2175	17.7	3.2	4.3	chr5	34547269	34547384	(146990875)	+	MLT1C	LTR/ERVL-MaLR	355	465	(2)	3099971
2089	19.5	3.4	10.8	chr5	34547437	34547907	(146990352)	C	MER61E	LTR/ERV1	(43)	526	92	3099973
220	24.3	28.4	0.2	chr5	65623683	65623842	(115914417)	+	MIR	SINE/MIR	9	217	(45)	3138132
1203	26.4	7.3	1.4	chr5	71887599	71888013	(109650246)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	70	3148208
2863	14.9	4.5	1.3	chr5	73461615	73462159	(108076100)	+	LTR9D	LTR/ERV1	1	645	(0)	3150509
27	16.0	1.7	1.7	chr5	77852620	77852705	(103685554)	+	GA-rich	Low_complexity	1	86	(0)	3157272
36	0.0	0.0	0.0	chr5	77852876	77852906	(103685353)	+	(CA)n	Simple_repeat	1	31	(0)	3157273
107	3.6	0.9	0.0	chr5	88676322	88676436	(92861823)	+	(TCC)n	Simple_repeat	1	116	(0)	3172658
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
20	25.9	5.6	1.1	chr5	111224137	111224183	(70314076)	+	G-rich	Low_complexity	1	91	(0)	3201161
13	15.8	2.6	5.0	chr5	111224184	111224222	(70314037)	+	GA-rich	Low_complexity	1	40	(0)	3201162
24	15.1	0.0	5.3	chr5	111224406	111224462	(70313797)	+	(GGC)n	Simple_repeat	1	57	(0)	3201163
28	15.6	4.2	4.7	chr5	111757232	111757305	(69780954)	+	G-rich	Low_complexity	1	73	(0)	3201825
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
2722	17.5	17.6	1.0	chr5	111875755	111876360	(69661899)	C	LTR9A1	LTR/ERV1	(0)	728	1	3202023
3727	14.0	12.5	0.5	chr5	121686409	121687048	(59851211)	+	LTR9A1	LTR/ERV1	1	728	(0)	3215007
3545	19.5	2.9	2.3	chr5	121687049	121687338	(59850921)	+	L1MB5	LINE/L1	5844	6138	(36)	3215006
465	28.1	7.7	0.9	chr5	168485905	168486154	(13052105)	+	L2a	LINE/L2	3113	3426	(0)	3290164
2007	21.6	16.6	4.4	chr5	171015599	171016301	(10521958)	C	L1MEf	LINE/L1	(5545)	855	50	3294612
293	34.0	1.0	1.9	chr5	171016327	171016431	(10521828)	C	MER58B	DNA/hAT-Charlie	(236)	105	2	3294614
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
18	22.7	1.7	3.3	chr6	8435410	8435469	(162370510)	+	(CTC)n	Simple_repeat	1	61	(0)	3326721
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
4268	9.2	1.6	0.0	chr6	20188405	20188960	(150617019)	C	MER61E	LTR/ERV1	(4)	565	1	3345560
3471	13.8	0.6	1.1	chr6	23300484	23301011	(147504968)	+	MER61E	LTR/ERV1	1	525	(44)	3350346
59	21.5	0.7	3.3	chr6	35213818	35213969	(135592010)	+	GA-rich	Low_complexity	1	153	(0)	3369926
1805	13.4	2.3	0.3	chr6	35776044	35776342	(135029637)	+	AluSz	SINE/Alu	1	305	(7)	3371122
15	15.8	0.0	5.1	chr6	42746494	42746532	(128059447)	+	(GTGG)n	Simple_repeat	1	39	(0)	3383927
12	26.2	1.7	4.9	chr6	42746533	42746547	(128059432)	+	G-rich	Low_complexity	15	61	(0)	3383928
1807	12.7	3.3	3.3	chr6	42891299	42891605	(127914374)	C	AluSz	SINE/Alu	(5)	307	1	3384285
1919	23.4	3.5	1.1	chr6	51309145	51309594	(119496385)	+	MLT1C	LTR/ERVL-MaLR	6	466	(1)	3396891
13	31.9	1.7	0.0	chr6	52421070	52421127	(118384852)	+	(TCTTTCT)n	Simple_repeat	1	59	(0)	3398524
2651	2.9	0.0	1.3	chr6	73645506	73645815	(97160164)	+	AluY	SINE/Alu	2	307	(4)	3423970
409	26.2	22.6	0.3	chr6	87829462	87829760	(82976219)	+	L2	LINE/L2	1956	2340	(1079)	3442296
251	15.0	0.2	2.2	chr6	87829761	87830215	(82975764)	+	(TCC)n	Simple_repeat	1	456	(0)	3442297
2648	19.3	0.9	1.3	chr6	107217765	107218227	(63587752)	+	MER65C	LTR/ERV1	1	461	(0)	3468459
837	25.8	12.4	5.6	chr6	107218233	107218679	(63587300)	+	L2a	LINE/L2	2767	3418	(8)	3468460
3615	14.7	13.9	0.2	chr6	111987631	111988258	(58817721)	+	LTR9A1	LTR/ERV1	1	728	(0)	3476484
1626	21.5	6.4	1.1	chr6	111988414	111988856	(58817123)	+	MER110A	LTR/ERV1	1	468	(0)	3476485
6009	13.9	4.2	2.2	chr6	116743807	116744776	(54061203)	C	L1MA7	LINE/L1	(160)	6131	5147	3483031
2313	20.6	15.4	1.1	chr6	116744777	116745399	(54060580)	C	LTR9A1	LTR/ERV1	(0)	728	1	3483033
2339	16.4	2.9	9.0	chr6	122523988	122524100	(48281879)	C	L1M4	LINE/L1	(2355)	4283	4176	3490515
113	26.6	0.9	2.7	chr6	122524101	122524106	(48281873)	+	(TCT)n	Simple_repeat	1	60	(272)	3490518
130	21.3	0.7	2.3	chr6	122524107	122524408	(48281571)	+	(CTCCTC)n	Simple_repeat	1	304	(0)	3490519
113	26.6	0.9	2.7	chr6	122524409	122524429	(48281550)	+	(TCT)n	Simple_repeat	61	332	(0)	3490518
20	22.9	1.4	5.3	chr6	132401772	132401845	(38404134)	+	GA-rich	Low_complexity	1	75	(0)	3503797
2501	8.8	0.0	0.0	chr6	139691758	139692062	(31113917)	+	AluSg	SINE/Alu	1	305	(5)	3515081
842	26.4	12.4	9.4	chr6	152067856	152068278	(18737701)	C	Charlie29a	DNA/hAT-Charlie	(51)	668	227	3533008
306	30.6	9.3	9.3	chr6	155978084	155978169	(14827810)	+	L2a	LINE/L2	3125	3198	(228)	3538835
44	2.0	1.9	1.9	chr6	155978170	155978221	(14827758)	+	(TCC)n	Simple_repeat	1	53	(0)	3538836
306	30.6	9.3	9.3	chr6	155978222	155978436	(14827543)	+	L2a	LINE/L2	3199	3426	(0)	3538835
63	22.7	2.0	3.9	chr6	156777683	156777881	(14028098)	+	(GGC)n	Simple_repeat	1	203	(0)	3539994
45	14.1	0.0	1.2	chr6	156778169	156778248	(14027731)	+	(CCA)n	Simple_repeat	1	80	(0)	3539995
713	19.1	2.2	0.0	chr6	158214386	158214516	(12591463)	+	AluJr	SINE/Alu	152	285	(27)	3542143
36	0.0	0.0	0.0	chr6	158214517	158214550	(12591429)	+	(AAAAC)n	Simple_repeat	1	34	(0)	3542144
74	0.0	1.4	0.0	chr6	158214661	158214729	(12591250)	+	(CTAT)n	Simple_repeat	1	70	(0)	3542145
2222	21.5	9.1	2.8	chr6	159640747	159641349	(11164630)	+	LTR9D	LTR/ERV1	1	645	(0)	3544368
790	19.1	5.0	6.2	chr6	159641350	159641494	(11164485)	C	MER106A	DNA/hAT-Charlie	(90)	146	1	3544367
3291	19.4	6.2	5.1	chr6	166988471	166989237	(3816742)	C	LTR19C	LTR/ERV1	(0)	779	4	3553874
739	21.7	6.6	3.4	chr6	168659181	168659385	(2146594)	C	MER74A	LTR/ERVL	(0)	558	347	3555668
412	18.9	10.4	0.0	chr6	168660082	168660176	(2145803)	C	MER74A	LTR/ERVL	(452)	106	1	3555668
2110	15.9	12.4	6.7	chr6	169003605	169003693	(1802286)	+	MER4E	LTR/ERV1	63	159	(451)	3556044
3158	16.5	6.8	3.7	chr6	169003694	169004347	(1801632)	C	MER61F	LTR/ERV1	(0)	676	1	3556046
1065	26.8	11.5	2.7	chr6	170280853	170281439	(524540)	C	L1MC5	LINE/L1	(11)	9293	8649	3557289
182	24.7	1.3	0.0	chr6	170452770	170453217	(352762)	+	(GT)n	Simple_repeat	1	454	(0)	3557445
217	18.2	3.7	2.1	chr7	1526083	1526593	(157819380)	+	GA-rich	Low_complexity	1	530	(0)	3560036
339	34.2	9.5	1.5	chr7	1526600	1526937	(157819036)	C	L1MC5a	LINE/L1	(2391)	386	19	3560037
1440	20.1	3.5	1.3	chr7	4039991	4040415	(155305558)	C	LTR45B	LTR/ERV1	(0)	489	19	3564170
4229	12.2	9.1	0.3	chr7	4040416	4041079	(155304894)	C	LTR9A1	LTR/ERV1	(0)	728	1	3564171
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
226	32.5	4.9	0.8	chr7	6680233	6680350	(152665623)	+	MLT1L	LTR/ERVL-MaLR	176	298	(312)	3569931
433	24.4	9.6	1.8	chr7	6680424	6680586	(152665387)	+	MLT1L	LTR/ERVL-MaLR	428	604	(6)	3569931
973	19.0	12.7	10.4	chr7	6707621	6707894	(152638079)	+	LTR37A	LTR/ERV1	4	289	(137)	3569976
2297	11.2	0.0	1.9	chr7	18391104	18391415	(140954558)	+	AluSx	SINE/Alu	2	307	(5)	3585246
325	30.5	4.0	8.2	chr7	18391421	18391627	(140954346)	C	MER103C	DNA/hAT-Charlie	(87)	210	13	3585247
31	10.1	2.9	4.2	chr7	24573277	24573297	(134772676)	+	(GCG)n	Simple_repeat	1	20	(0)	3594106
38	0.0	0.0	0.0	chr7	24573298	24573332	(134772641)	+	(GGA)n	Simple_repeat	1	35	(0)	3594107
31	10.1	2.9	4.2	chr7	24573333	24573380	(134772593)	+	(GCG)n	Simple_repeat	3	50	(0)	3594108
16	10.0	4.0	7.7	chr7	24573401	24573450	(134772523)	+	G-rich	Low_complexity	1	52	(0)	3594109
25	20.8	1.3	5.0	chr7	24573501	24573579	(134772394)	+	(CGG)n	Simple_repeat	1	80	(0)	3594110
325	39.3	3.4	0.4	chr7	30963249	30963478	(128382495)	C	L3	LINE/CR1	(1045)	3054	2818	3603929
32	36.8	1.1	2.1	chr7	32495286	32495475	(126850498)	+	(GCCCC)n	Simple_repeat	1	192	(0)	3606331
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
255	24.5	4.7	9.5	chr7	39746010	39746167	(119599806)	+	MER5A1	DNA/hAT-Charlie	16	165	(1)	3617068
59	7.2	0.0	0.0	chr7	43248671	43248745	(116097228)	+	(CCT)n	Simple_repeat	1	75	(0)	3622340
445	19.6	2.9	0.0	chr7	48472351	48472452	(110873521)	C	LTR23	LTR/ERV1	(0)	437	333	3629959
1082	28.7	8.2	8.9	chr7	48472488	48472881	(110873092)	C	LTR19C	LTR/ERV1	(0)	779	385	3629960
3641	14.0	12.9	0.5	chr7	51796424	51797060	(107548913)	+	LTR9A1	LTR/ERV1	1	728	(0)	3634121
14	22.9	0.0	6.9	chr7	51797061	51797073	(107548900)	+	(TTTA)n	Simple_repeat	2	14	(0)	3634122
3890	12.5	6.4	0.2	chr7	52410655	52411288	(106934685)	C	MER61F	LTR/ERV1	(0)	676	1	3634867
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
440	7.8	6.3	0.4	chr7	66098890	66099632	(93246341)	+	(AGG)n	Simple_repeat	1	790	(0)	3649224
22	11.9	0.0	0.0	chr7	66099714	66099750	(93246223)	+	(AGG)n	Simple_repeat	1	37	(0)	3649225
19	10.5	0.0	0.0	chr7	66099784	66099814	(93246159)	+	(AGG)n	Simple_repeat	1	31	(0)	3649225
30	0.0	0.0	0.0	chr7	66100213	66100240	(93245733)	+	(AGG)n	Simple_repeat	1	28	(0)	3649226
12	5.6	0.0	0.0	chr7	66100275	66100293	(93245680)	+	(AGG)n	Simple_repeat	1	19	(0)	3649226
20	5.3	10.0	0.0	chr7	66100325	66100364	(93245609)	+	GA-rich	Low_complexity	1	44	(0)	3649227
1294	17.3	7.4	3.2	chr7	66100374	66100656	(93245317)	+	AluSc8	SINE/Alu	2	297	(14)	3649228
4306	11.0	2.5	0.6	chr7	69501200	69501830	(89844143)	+	LTR9D	LTR/ERV1	3	645	(0)	3656832
39	6.3	0.0	0.0	chr7	74657649	74657698	(84688275)	+	(A)n	Simple_repeat	1	50	(0)	3667694
15	11.6	0.0	3.3	chr7	74657698	74657727	(84688246)	+	(AGG)n	Simple_repeat	1	30	(0)	3667695
15	16.3	0.0	2.8	chr7	77416499	77416534	(81929439)	+	(GCCGGA)n	Simple_repeat	1	36	(0)	3673726
185	26.0	5.7	0.0	chr7	77416712	77416761	(81929212)	+	MER5B	DNA/hAT-Charlie	125	177	(1)	3673727
595	26.3	3.0	2.5	chr7	83164878	83165076	(76180897)	+	MIRc	SINE/MIR	52	251	(17)	3681898
349	23.3	11.4	10.6	chr7	83165185	83165419	(76180554)	+	MLT1H2	LTR/ERVL-MaLR	304	547	(2)	3681899
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
880	9.7	0.8	0.8	chr7	99559417	99559540	(59786433)	+	AluJr	SINE/Alu	1	124	(188)	3705014
3797	11.4	2.3	1.1	chr7	125661748	125662306	(33683667)	+	MER61E	LTR/ERV1	1	566	(3)	3743420
478	29.9	7.2	7.5	chr7	132561249	132561274	(26784699)	+	L2c	LINE/L2	3108	3134	(253)	3754575
1618	12.2	1.0	1.0	chr7	132561275	132564422	(26781551)	+	(CCT)n	Simple_repeat	1	3179	(0)	3754576
12	20.1	2.6	2.6	chr7	135977720	135977757	(23368216)	+	(TTCC)n	Simple_repeat	1	39	(0)	3759917
12	23.1	0.0	2.6	chr7	135977742	135977779	(23368194)	+	(CCCT)n	Simple_repeat	1	38	(0)	3759918
1083	24.5	13.0	3.8	chr7	140035357	140035835	(19310138)	+	LTR82A	LTR/ERVL	293	822	(50)	3766613
17	21.2	1.7	3.3	chr7	151122481	151122519	(8223454)	+	(CTGCCG)n	Simple_repeat	1	39	(0)	3782941
53	11.1	0.0	0.0	chr7	151122520	151122607	(8223366)	+	(CCT)n	Simple_repeat	1	88	(0)	3782942
17	16.4	0.0	4.3	chr7	151122608	151122626	(8223347)	+	(GCC)n	Simple_repeat	2	19	(0)	3782943
29	27.7	1.6	3.9	chr7	157337247	157337372	(2008601)	+	G-rich	Low_complexity	1	128	(0)	3792328
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
468	15.2	0.0	2.4	chr7	158717098	158717944	(628029)	+	(CCT)n	Simple_repeat	1	847	(0)	3793599
375	21.6	5.8	1.0	chr7	158864156	158864253	(481720)	C	LTR56	LTR/ERV1	(342)	103	1	3793810
1447	24.3	7.4	4.2	chr8	12835914	12836040	(132302596)	+	L1MC4	LINE/L1	6617	6764	(1278)	3811641
2717	18.6	14.6	0.6	chr8	12836041	12836666	(132301970)	C	LTR9A1	LTR/ERV1	(0)	728	1	3811643
189	32.5	8.8	2.3	chr8	20172371	20172477	(124966159)	+	L2b	LINE/L2	3259	3369	(18)	3822384
978	6.5	0.8	0.0	chr8	33512782	33512904	(111625732)	+	AluYc3	SINE/Alu	177	300	(0)	3844635
2259	11.8	0.0	0.0	chr8	42587503	42587806	(102550830)	+	AluSq2	SINE/Alu	1	304	(9)	3859059
391	24.9	36.0	4.6	chr8	42587807	42588154	(102550482)	+	MLT1H2	LTR/ERVL-MaLR	1	463	(86)	3859060
170	18.1	1.6	2.4	chr8	43274747	43275122	(101863514)	+	(TCC)n	Simple_repeat	1	382	(0)	3860358
2665	16.5	1.1	5.2	chr8	55210612	55211171	(89927465)	C	MER61E	LTR/ERV1	(0)	666	1	3872112
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
23	17.5	0.0	0.0	chr8	66666906	66666950	(78471686)	+	(GGC)n	Simple_repeat	1	45	(0)	3887825
2306	3.5	0.3	0.3	chr8	73260265	73260547	(71878089)	+	L1PA5	LINE/L1	5871	6153	(1)	3897702
556	26.0	8.2	12.4	chr8	73260548	73260740	(71877896)	C	L2c	LINE/L2	(137)	3250	3048	3897701
2766	11.6	1.3	14.2	chr8	73260741	73261261	(71877375)	+	MLT2A2	LTR/ERVL	1	453	(0)	3897703
588	30.1	9.5	3.9	chr8	81672124	81672286	(63466350)	+	Tigger13a	DNA/TcMar-Tigger	410	577	(194)	3909599
1101	19.5	8.6	4.0	chr8	81672287	81672708	(63465928)	+	LTR56	LTR/ERV1	1	443	(2)	3909600
588	30.1	9.5	3.9	chr8	81672709	81672882	(63465754)	+	Tigger13a	DNA/TcMar-Tigger	578	768	(3)	3909599
211	28.4	17.3	2.0	chr8	85741664	85741814	(59396822)	C	MIRc	SINE/MIR	(2)	266	88	3914959
725	25.9	9.9	1.1	chr8	85741808	85742051	(59396585)	C	MIR	SINE/MIR	(0)	262	1	3914960
16	19.0	4.5	5.7	chr8	98825936	98826002	(46312634)	+	(GGCG)n	Simple_repeat	1	70	(0)	3934229
29	23.9	1.9	3.7	chr8	98826003	98826021	(46312615)	+	(GGCCGG)n	Simple_repeat	51	107	(0)	3934228
3411	12.8	18.7	0.0	chr8	124914984	124915575	(20223061)	+	LTR9A1	LTR/ERV1	1	728	(0)	3974600
407	23.2	16.5	6.3	chr8	124915706	124915894	(20222742)	+	MIRb	SINE/MIR	51	262	(6)	3974601
1622	16.7	3.4	1.3	chr8	133364552	133365002	(11773634)	+	LTR9D	LTR/ERV1	236	728	(0)	3990295
406	29.2	5.4	4.2	chr8	133365026	133365290	(11773346)	+	MLT1K	LTR/ERVL-MaLR	324	604	(6)	3990296
55	25.7	5.7	3.4	chr8	142448938	142449218	(2689418)	+	(CCAT)n	Simple_repeat	1	297	(0)	4004912
14	4.1	3.7	3.6	chr8	143544381	143544407	(1594229)	+	(TCC)n	Simple_repeat	1	28	(0)	4006306
1078	14.0	0.2	0.5	chr8	143669231	143669438	(1469198)	C	LTR10B1	LTR/ERV1	(55)	492	240	4006487
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
287	25.8	8.5	2.0	chr8	144478530	144478628	(660008)	C	MIRc	SINE/MIR	(73)	195	90	4007653
2192	12.8	0.0	0.0	chr9	1015415	1015712	(137379005)	+	AluJb	SINE/Alu	1	298	(14)	4010136
3077	21.8	6.6	1.3	chr9	1015713	1015853	(137378864)	C	L1ME3A	LINE/L1	(1800)	4346	4211	4010135
844	25.1	15.8	1.2	chr9	1015883	1016217	(137378500)	C	L1ME3A	LINE/L1	(5620)	622	230	4010135
1433	28.5	6.8	8.0	chr9	6239097	6239749	(132154968)	+	LTR19C	LTR/ERV1	135	779	(0)	4017739
321	26.2	7.3	0.0	chr9	6239798	6239928	(132154789)	C	L1MC5a	LINE/L1	(1219)	1558	1459	4017740
453	26.6	8.1	0.5	chr9	6239913	6240105	(132154612)	C	L1MC5a	LINE/L1	(1460)	1317	1109	4017741
267	24.3	10.0	0.5	chr9	6646152	6646265	(131748452)	+	MIRc	SINE/MIR	82	220	(42)	4018393
24	17.2	1.4	5.7	chr9	6646288	6646372	(131748345)	+	(TCCTCC)n	Simple_repeat	1	81	(0)	4018394
1922	13.8	2.0	0.0	chr9	6646386	6646676	(131748041)	+	AluJb	SINE/Alu	8	304	(8)	4018395
1985	7.3	8.4	1.1	chr9	6646758	6647031	(131747686)	C	AluSc8	SINE/Alu	(14)	297	2	4018396
903	22.9	1.0	6.8	chr9	15126911	15127130	(123267587)	C	LTR8A	LTR/ERV1	(0)	727	521	4029971
843	25.9	0.0	0.0	chr9	20543496	20543661	(117851056)	+	FRAM	SINE/Alu	1	166	(10)	4038025
11505	15.6	5.8	3.6	chr9	20543662	20543956	(117850761)	C	Tigger1	DNA/TcMar-Tigger	(2054)	364	10	4038022
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
195	20.6	7.6	5.2	chr9	77849044	77849120	(60545597)	+	MamRTE1	LINE/RTE-BovB	1419	1497	(2315)	4094881
1751	18.8	2.1	1.3	chr9	86107138	86107515	(52287202)	+	L1MA4	LINE/L1	5863	6243	(57)	4107316
1392	18.7	13.2	2.3	chr9	89671812	89672161	(48722556)	+	MLT1C	LTR/ERVL-MaLR	74	467	(0)	4112799
4380	16.9	5.9	7.1	chr9	92519269	92520008	(45874709)	+	L1MB5	LINE/L1	4593	5334	(840)	4116842
1765	17.5	0.3	1.4	chr9	92520009	92520299	(45874418)	+	AluJr	SINE/Alu	10	297	(15)	4116843
4380	14.3	3.8	4.2	chr9	92520300	92521114	(45873603)	+	L1MB5	LINE/L1	5335	6152	(22)	4116842
439	32.1	18.1	3.7	chr9	101400192	101400806	(36993911)	+	L2	LINE/L2	257	979	(2440)	4131636
991	28.3	16.6	8.2	chr9	107289822	107290514	(31104203)	+	L2	LINE/L2	1185	1947	(1472)	4140373
335	32.9	8.4	1.8	chr9	107290533	107290699	(31104018)	+	MIRc	SINE/MIR	60	238	(30)	4140374
753	28.0	8.3	3.5	chr9	129409897	129410233	(8984484)	+	MLT1C	LTR/ERVL-MaLR	34	396	(71)	4182751
225	17.4	1.6	0.0	chr9	129410256	129410685	(8984032)	+	(CACCAT)n	Simple_repeat	1	437	(0)	4182753
186	20.4	2.2	0.0	chr9	133759899	133759942	(4634775)	+	MIRb	SINE/MIR	224	268	(0)	4191054
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1134	13.8	16.7	1.1	chrX	3807449	3807689	(152233206)	C	L1MB3	LINE/L1	(10)	6173	5885	4365635
3703	13.5	2.2	4.2	chrX	3807690	3807799	(152233096)	C	L1PA16	LINE/L1	(0)	6166	6070	4365636
4142	12.3	9.2	0.1	chrX	3807800	3808459	(152232436)	C	LTR9A1	LTR/ERV1	(0)	728	3	4365637
1212	14.6	2.4	5.5	chrX	6310516	6310769	(149730126)	C	LTR8	LTR/ERV1	(0)	691	446	4369910
2883	14.1	2.5	3.4	chrX	6310773	6311302	(149729593)	C	MER61E	LTR/ERV1	(44)	525	1	4369911
1697	23.8	12.6	7.8	chrX	28191812	28192544	(127848351)	+	LTR19C	LTR/ERV1	7	779	(0)	4404846
4099	10.5	1.2	5.6	chrX	28192545	28193476	(127847419)	C	L1M1	LINE/L1	(568)	5736	4798	4404847
36	18.8	6.0	1.7	chrX	41276457	41276554	(114764341)	+	GA-rich	Low_complexity	1	102	(0)	4424008
16	21.1	4.1	0.0	chrX	47582233	47582281	(108458614)	+	G-rich	Low_complexity	1	51	(0)	4434475
2884	22.7	3.5	1.8	chrX	73557342	73557669	(82483226)	+	L1MB7	LINE/L1	5396	5731	(1275)	4464570
2794	18.4	14.3	2.0	chrX	73557670	73558306	(82482589)	C	LTR9A1	LTR/ERV1	(0)	728	1	4464574
268	32.6	6.7	0.3	chrX	73817248	73817385	(82223510)	+	MIR3	SINE/MIR	2	143	(87)	4464779
19	8.8	5.6	0.0	chrX	73817692	73817727	(82223168)	+	(AAC)n	Simple_repeat	1	38	(0)	4464780
13397	19.4	3.3	2.5	chrX	82648484	82651358	(73389537)	C	HUERS-P3-int	LTR/ERV1	(5694)	3225	17	4474076
3350	16.9	12.9	1.9	chrX	82651373	82652018	(73388877)	C	LTR9A1	LTR/ERV1	(0)	728	1	4474076
3580	18.4	4.4	4.2	chrX	87982962	87983739	(68057156)	+	LTR19C	LTR/ERV1	1	779	(0)	4479742
5228	12.7	7.7	0.0	chrX	93242613	93243391	(62797504)	+	LTR25	LTR/ERV1	1	844	(0)	4485386
16861	14.6	5.5	2.3	chrX	93243392	93244403	(62796492)	+	L1PB2	LINE/L1	5493	6535	(332)	4485384
2742	21.7	3.7	1.9	chrX	96109495	96110128	(59930767)	C	MLT1C-int	LTR/ERVL-MaLR	(105)	1384	559	4488720
3552	13.8	13.2	0.6	chrX	96110129	96110764	(59930131)	C	LTR9A1	LTR/ERV1	(0)	728	1	4488721
828	28.0	0.0	1.1	chrX	103864414	103864597	(52176298)	C	MIRb	SINE/MIR	(67)	201	20	4499271
3884	21.1	7.3	0.4	chrX	103864676	103865210	(52175685)	C	LTR25	LTR/ERV1	(0)	844	258	4499272
661	31.1	5.5	0.8	chrX	107656119	107656478	(48384417)	C	L2c	LINE/L2	(514)	2905	2528	4504563
679	15.8	0.0	5.3	chrX	107656850	107656963	(48383932)	+	FLAM_A	SINE/Alu	18	125	(17)	4504566
3725	11.2	1.8	1.8	chrX	114071435	114071999	(41968896)	+	MER61E	LTR/ERV1	1	565	(4)	4513636
772	10.9	5.8	8.0	chrX	114072000	114072124	(41968771)	C	LTR29	LTR/ERV1	(49)	604	454	4513635
444	8.5	1.0	0.0	chrX	114072125	114072201	(41968694)	C	MER57A1	LTR/ERV1	(2)	430	329	4513637
3554	14.0	0.4	1.5	chrX	133247084	133247620	(22793275)	+	MER61E	LTR/ERV1	1	531	(38)	4540607
71	27.0	4.4	4.9	chrX	134796358	134796747	(21244148)	+	GA-rich	Low_complexity	1	407	(0)	4543385
2305	12.3	2.1	1.5	chrX	135058501	135058837	(20982058)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	4543896
1675	18.5	15.6	4.7	chrX	135058838	135059244	(20981651)	+	MER66C	LTR/ERV1	41	500	(55)	4543895
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
296	27.5	0.0	0.0	chrY	11005579	11005647	(46221768)	C	AluYa8	SINE/Alu	(19)	291	223	4588665
338	21.0	6.9	0.0	chrY	11281975	11282055	(45945360)	C	MER21C	LTR/ERVL	(822)	116	30	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056