12	22.0	4.8	0.0	chr1	999480	999521	(247956901)	+	(CCCCCG)n	Simple_repeat	1	44	(0)	1253
17	12.8	2.9	0.0	chr1	1000024	1000057	(247956365)	+	G-rich	Low_complexity	1	35	(0)	1254
12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
5980	8.5	2.0	0.6	chr1	1417491	1418377	(247538045)	C	Harlequin-int	LTR/ERV1	(5996)	900	1	1713
2385	8.8	0.3	0.3	chr1	1504368	1504674	(247451748)	+	AluSp	SINE/Alu	1	307	(6)	1866
20	4.1	0.0	0.0	chr1	1504926	1504950	(247451472)	+	(GT)n	Simple_repeat	1	25	(0)	1867
2038	13.2	8.3	0.0	chr1	1874859	1875169	(247081253)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2526
12	18.5	3.6	6.9	chr1	2412373	2412428	(246543994)	+	(GCCGCGC)n	Simple_repeat	1	58	(0)	3202
35	25.6	1.6	7.4	chr1	2412623	2412808	(246543614)	+	G-rich	Low_complexity	1	189	(0)	3203
3577	19.5	4.8	0.6	chr1	2995596	2997090	(245959332)	C	L1MC4a	LINE/L1	(1731)	4913	4126	3651
3975	11.6	8.2	2.2	chr1	3621644	3622155	(245334267)	+	THE1D-int	LTR/ERVL-MaLR	1020	1580	(0)	4158
2001	11.2	10.8	2.6	chr1	3622156	3622504	(245333918)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4158
2096	18.2	6.6	1.7	chr1	5232913	5233331	(243723091)	+	MER39	LTR/ERV1	4	505	(202)	6446
2190	10.5	7.9	0.8	chr1	5233332	5233685	(243722737)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	6447
1866	16.0	0.7	1.4	chr1	6283171	6283463	(242672959)	C	AluSz6	SINE/Alu	(19)	293	3	7943
2288	11.7	0.0	0.7	chr1	6347484	6347790	(242608632)	+	AluSz	SINE/Alu	2	306	(6)	8039
467	29.8	1.3	9.2	chr1	6347791	6347892	(242608530)	+	MIRc	SINE/MIR	160	259	(9)	8038
276	31.2	8.2	0.9	chr1	6496143	6496255	(242460167)	+	MIRb	SINE/MIR	95	216	(52)	8328
28	21.9	0.0	3.8	chr1	6554193	6554272	(242402150)	+	G-rich	Low_complexity	1	80	(0)	8454
17	16.1	3.9	3.7	chr1	6602163	6602214	(242354208)	+	(GCGGC)n	Simple_repeat	1	54	(0)	8522
12	31.0	0.0	1.9	chr1	8818008	8818060	(240138362)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	12309
15	8.2	12.7	3.2	chr1	8879289	8879343	(240077079)	+	(CGCCTG)n	Simple_repeat	1	62	(0)	12447
13	18.2	2.6	2.5	chr1	9539663	9539701	(239416721)	+	(CGGCGA)n	Simple_repeat	1	40	(0)	13848
2378	7.9	0.3	1.6	chr1	9766377	9766692	(239189730)	+	AluSz6	SINE/Alu	1	312	(0)	14327
744	20.3	0.0	0.0	chr1	9817085	9817202	(239139220)	+	AluJo	SINE/Alu	1	118	(194)	14444
2453	7.0	0.3	0.3	chr1	9817330	9817627	(239138795)	C	AluSp	SINE/Alu	(15)	298	1	14445
12	20.2	0.0	6.7	chr1	9823796	9823840	(239132582)	+	G-rich	Low_complexity	1	45	(0)	14454
15	0.0	0.0	0.0	chr1	9823863	9823881	(239132541)	+	(GCC)n	Simple_repeat	1	19	(0)	14455
17	27.1	1.3	3.9	chr1	10210638	10210713	(238745709)	+	(CACCGCC)n	Simple_repeat	1	77	(0)	15342
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
603	28.7	11.2	0.8	chr1	10522301	10522549	(238433873)	+	L3	LINE/CR1	3801	4078	(21)	15970
2237	11.8	0.7	0.3	chr1	11657458	11657763	(237298659)	+	AluSq2	SINE/Alu	1	307	(6)	18175
250	24.7	7.3	2.2	chr1	11657764	11657854	(237298568)	+	MER58C	DNA/hAT-Charlie	81	176	(39)	18176
492	26.4	3.2	1.4	chr1	11657857	11658026	(237298396)	C	MIRc	SINE/MIR	(49)	181	14	18177
2677	15.8	3.1	1.1	chr1	14854352	14854799	(234101623)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	24010
1726	22.1	7.8	1.8	chr1	14973848	14974339	(233982083)	C	MLT1H1	LTR/ERVL-MaLR	(4)	551	3	24276
1380	25.7	9.7	1.6	chr1	14974412	14974962	(233981460)	+	L1ME1	LINE/L1	5575	6177	(2)	24277
309	28.4	2.2	0.0	chr1	15246992	15247093	(233709329)	+	MIR	SINE/MIR	42	146	(62)	24859
1240	28.3	9.0	0.9	chr1	15543052	15543759	(233412663)	C	L2a	LINE/L2	(20)	3406	2647	25505
436	29.3	4.2	3.8	chr1	15543761	15543998	(233412424)	C	L2-1_AMi	LINE/L2	(540)	695	457	25506
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
791	16.1	19.1	6.0	chr1	15795295	15795547	(233160875)	+	LTR37A	LTR/ERV1	1	286	(140)	26053
2178	9.4	0.0	1.7	chr1	15795548	15795844	(233160578)	C	AluSx	SINE/Alu	(20)	292	1	26054
12	25.2	1.8	5.2	chr1	16073508	16073564	(232882858)	+	G-rich	Low_complexity	1	58	(0)	26617
12	14.1	10.3	0.0	chr1	16073610	16073648	(232882774)	+	(CGCCT)n	Simple_repeat	1	43	(0)	26618
16	22.6	3.3	3.2	chr1	16073649	16073664	(232882758)	+	(GCC)n	Simple_repeat	6	62	(0)	26619
14	26.9	2.0	0.0	chr1	16073681	16073729	(232882693)	+	G-rich	Low_complexity	1	50	(0)	26620
2606	7.1	0.0	0.0	chr1	16296370	16296679	(232659743)	+	AluSg	SINE/Alu	1	310	(0)	27131
21	5.9	0.0	2.6	chr1	16296913	16296942	(232659480)	+	(CCCCCCA)n	Simple_repeat	1	29	(0)	27132
2007	15.2	0.3	0.0	chr1	16611991	16612287	(232344135)	C	AluJb	SINE/Alu	(12)	300	3	27818
234	35.9	3.3	0.7	chr1	16914490	16914635	(232041787)	C	MIRb	SINE/MIR	(23)	245	96	28247
189	28.9	13.5	1.1	chr1	17053234	17053324	(231903098)	C	MIRb	SINE/MIR	(39)	229	126	28579
306	22.4	16.9	0.0	chr1	17828862	17828959	(231127463)	C	MLT1L	LTR/ERVL-MaLR	(147)	463	346	30313
218	31.9	1.4	1.4	chr1	17829131	17829203	(231127219)	C	MIRb	SINE/MIR	(189)	79	7	30312
389	23.8	0.0	0.0	chr1	18394895	18394978	(230561444)	+	MER103C	DNA/hAT-Charlie	109	192	(105)	31544
993	25.2	5.3	10.9	chr1	18489581	18490056	(230466366)	+	MLT1H	LTR/ERVL-MaLR	102	549	(0)	31765
14	17.8	10.5	0.0	chr1	18955934	18955990	(230000432)	+	(GGCGCCG)n	Simple_repeat	1	63	(0)	32771
15	24.7	4.2	4.0	chr1	18956044	18956115	(230000307)	+	(GCT)n	Simple_repeat	1	75	(0)	32772
15	18.2	0.0	4.9	chr1	19882621	19882661	(229073761)	+	(GCG)n	Simple_repeat	1	41	(0)	34717
21	21.1	0.0	3.5	chr1	20633486	20633543	(228322879)	+	(CGG)n	Simple_repeat	1	58	(0)	36239
12	21.0	0.0	7.8	chr1	20633687	20633737	(228322685)	+	(GGCTCG)n	Simple_repeat	1	51	(0)	36240
2863	1.7	0.0	0.0	chr1	21135902	21136202	(227820220)	+	AluYb8	SINE/Alu	1	301	(17)	37201
2392	10.0	0.7	0.0	chr1	21136237	21136546	(227819876)	+	AluSx1	SINE/Alu	1	312	(0)	37202
44	2.3	0.0	0.0	chr1	21176568	21176611	(227779811)	+	(CGC)n	Simple_repeat	1	44	(0)	37302
38	35.3	1.8	1.7	chr1	21332590	21332760	(227623662)	+	G-rich	Low_complexity	1	174	(0)	37690
455	31.8	8.1	4.8	chr1	21332928	21333178	(227623244)	C	MIRb	SINE/MIR	(0)	268	9	37691
720	22.2	7.2	6.2	chr1	21827217	21827408	(227129014)	C	MIR	SINE/MIR	(62)	200	7	38777
211	36.1	6.9	0.0	chr1	21827506	21827627	(227128795)	+	L2c	LINE/L2	3257	3387	(0)	38778
336	19.1	3.0	1.6	chr1	21827631	21827753	(227128669)	C	MIRc	SINE/MIR	(127)	141	12	38779
19	24.5	0.0	1.8	chr1	23019614	23019668	(225936754)	+	(GGC)n	Simple_repeat	1	55	(0)	41476
13	15.2	2.5	4.9	chr1	23743733	23743772	(225212650)	+	G-rich	Low_complexity	1	41	(0)	43265
462	26.8	1.6	3.1	chr1	25149105	25149231	(223807191)	+	L2b	LINE/L2	3251	3375	(0)	46483
3292	28.1	14.3	5.5	chr1	25149380	25150179	(223806243)	+	L1ME3E	LINE/L1	28	897	(6206)	46484
19	25.2	2.7	2.6	chr1	25429997	25430070	(223526352)	+	(CCGGC)n	Simple_repeat	1	76	(0)	47147
209	26.4	10.3	1.1	chr1	25501771	25501858	(223454564)	+	MIRb	SINE/MIR	46	142	(126)	47267
274	22.7	14.8	6.4	chr1	25502040	25502180	(223454242)	+	MER5A1	DNA/hAT-Charlie	8	162	(4)	47268
995	19.7	2.5	10.6	chr1	25616873	25617481	(223338941)	+	MER52D	LTR/ERV1	5	1016	(1107)	47517
21	25.8	1.2	4.7	chr1	26164344	26164428	(222791994)	+	(CGC)n	Simple_repeat	1	86	(0)	48725
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
13	14.2	3.2	0.0	chr1	26697262	26697292	(222259130)	+	(CCCCAC)n	Simple_repeat	1	32	(0)	50007
19	15.4	0.0	0.0	chr1	26697414	26697449	(222258973)	+	(GGC)n	Simple_repeat	1	36	(0)	50008
2144	9.8	0.0	7.9	chr1	27116078	27116395	(221840027)	+	AluSx1	SINE/Alu	1	293	(19)	50963
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
1948	16.7	1.9	2.2	chr1	28437219	28437529	(220518893)	C	AluJb	SINE/Alu	(2)	310	1	54205
1833	18.5	2.2	5.6	chr1	28437530	28437834	(220518588)	C	MLT1A0	LTR/ERVL-MaLR	(59)	306	1	54204
16	32.2	1.2	2.5	chr1	28914778	28914857	(220041565)	+	(GGC)n	Simple_repeat	1	81	(0)	55499
650	33.0	9.2	9.2	chr1	29008574	29009216	(219947206)	+	L2c	LINE/L2	2750	3386	(1)	55717
19	20.8	0.0	6.3	chr1	29181798	29181860	(219774562)	+	(GGC)n	Simple_repeat	1	63	(0)	56088
16	22.6	0.0	0.0	chr1	29237551	29237583	(219718839)	+	(GT)n	Simple_repeat	1	33	(0)	56236
7433	21.6	4.1	2.3	chr1	30017506	30019364	(218937058)	C	L1M4	LINE/L1	(5608)	1909	17	57686
3620	28.6	5.8	1.2	chr1	30022215	30023350	(218933072)	C	L1MB8	LINE/L1	(5676)	1191	1	57691
370	30.1	7.4	2.9	chr1	30426199	30426403	(218530019)	+	Charlie16a	DNA/hAT-Charlie	65	279	(63)	58411
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
409	28.2	13.2	4.8	chr1	31110901	31111162	(217845260)	C	L2c	LINE/L2	(245)	3142	2846	59835
21	22.4	3.6	3.5	chr1	31239640	31239729	(217716693)	+	(GCGCCGG)n	Simple_repeat	1	90	(0)	60221
19	20.2	1.9	1.9	chr1	31239829	31239881	(217716541)	+	(GCGCGGA)n	Simple_repeat	1	54	(0)	60222
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
206	34.6	4.3	0.8	chr1	31748201	31748334	(217208088)	C	MIRb	SINE/MIR	(46)	222	84	61248
196	25.0	3.6	4.8	chr1	31748469	31748552	(217207870)	C	L2b	LINE/L2	(2)	3373	3291	61249
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
24	27.4	1.0	4.0	chr1	33256540	33256638	(215699784)	+	(GAGCCG)n	Simple_repeat	1	100	(0)	64795
16	29.2	2.7	5.3	chr1	33349580	33349689	(215606733)	+	(CCCGG)n	Simple_repeat	1	113	(0)	64945
487	20.7	2.4	1.6	chr1	35239719	35239841	(213716581)	C	MIRb	SINE/MIR	(85)	183	60	68346
1809	13.7	0.8	0.0	chr1	35239854	35240116	(213716306)	C	AluSz	SINE/Alu	(6)	306	42	68347
15	26.6	3.5	0.0	chr1	36156163	36156220	(212800202)	+	G-rich	Low_complexity	1	60	(0)	70247
16	0.0	0.0	0.0	chr1	36156365	36156384	(212800038)	+	(GCC)n	Simple_repeat	1	20	(0)	70248
2210	21.2	2.4	7.8	chr1	36240096	36240673	(212715749)	C	MLT2B3	LTR/ERVL	(8)	546	1	70465
182	33.3	0.0	0.0	chr1	36385410	36385460	(212570962)	+	MIRb	SINE/MIR	55	105	(163)	70746
12	11.8	2.3	8.9	chr1	37808027	37808070	(211148352)	+	G-rich	Low_complexity	1	45	(0)	73488
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
12	17.6	5.0	2.4	chr1	39576756	39576795	(209379627)	+	(GCG)n	Simple_repeat	1	42	(0)	76952
15	17.0	9.8	1.5	chr1	39576889	39576949	(209379473)	+	(CGGCG)n	Simple_repeat	1	67	(0)	76953
440	27.4	6.3	6.7	chr1	39577002	39577120	(209379302)	C	MER20B	DNA/hAT-Charlie	(23)	760	649	76954
17	13.3	7.8	1.8	chr1	40980273	40980323	(207976099)	+	G-rich	Low_complexity	1	55	(0)	79991
1815	27.0	6.8	5.8	chr1	41218848	41219532	(207736890)	+	MER21C	LTR/ERVL	128	819	(119)	80356
334	31.5	3.6	0.0	chr1	41341563	41341670	(207614752)	C	L2c	LINE/L2	(38)	3349	3238	80618
606	27.4	2.4	0.0	chr1	41341793	41341956	(207614466)	C	MIRb	SINE/MIR	(31)	237	70	80619
37	24.2	4.0	2.3	chr1	41940800	41940923	(207015499)	+	GA-rich	Low_complexity	1	129	(0)	81708
298	29.0	16.2	2.2	chr1	41940945	41941124	(207015298)	C	L2-3_Crp	LINE/L2	(1138)	958	749	81709
1116	30.4	8.6	2.0	chr1	41941150	41941749	(207014673)	C	L2	LINE/L2	(1507)	1912	1270	81710
6011	24.4	13.1	3.7	chr1	42389825	42390026	(206566396)	C	L2a	LINE/L2	(1358)	2061	1820	82430
408	33.2	8.7	4.8	chr1	42836036	42836462	(206119960)	C	L2a	LINE/L2	(1)	3425	2924	83251
2916	26.2	4.3	7.3	chr1	43205115	43205985	(205750437)	C	L1M4b	LINE/L1	(5913)	954	111	83952
1459	19.3	8.4	0.4	chr1	43205986	43206260	(205750162)	C	AluJb	SINE/Alu	(13)	299	1	83954
268	26.2	6.7	10.6	chr1	43551979	43552166	(205404256)	+	L2	LINE/L2	1670	1849	(1570)	84490
234	30.9	0.0	4.1	chr1	43552199	43552296	(205404126)	+	L2-3_Crp	LINE/L2	719	812	(1284)	84491
411	23.6	12.4	0.9	chr1	43552322	43552428	(205403994)	+	MIRb	SINE/MIR	38	158	(110)	84492
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
15	25.3	2.6	5.1	chr1	43707772	43707848	(205248574)	+	G-rich	Low_complexity	1	79	(0)	84748
15	21.2	0.0	2.5	chr1	44355120	44355159	(204601263)	+	(GGC)n	Simple_repeat	1	40	(0)	85869
617	27.8	7.5	3.4	chr1	44789899	44790103	(204166319)	+	MIRb	SINE/MIR	2	215	(53)	86713
15	29.6	0.0	1.8	chr1	44800491	44800546	(204155876)	+	(CCGCGC)n	Simple_repeat	1	56	(0)	86740
547	31.4	6.6	3.1	chr1	45190334	45190536	(203765886)	+	ERV3-16A3_I-int	LTR/ERVL	4963	5175	(51)	87484
1062	32.0	14.6	6.6	chr1	45875459	45876481	(203079941)	C	L2b	LINE/L2	(575)	2844	1710	88950
5536	9.6	4.9	3.6	chr1	46331236	46332068	(202624354)	C	Harlequin-int	LTR/ERV1	(6039)	857	1	89818
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
300	37.4	0.0	0.0	chr1	47493675	47493781	(201462641)	+	MIRb	SINE/MIR	89	195	(73)	91707
878	28.3	14.6	1.6	chr1	47493857	47494280	(201462142)	C	MLT1N2	LTR/ERVL-MaLR	(8)	554	67	91709
2065	25.3	14.5	6.8	chr1	48302486	48303137	(200653285)	C	L1M4a2	LINE/L1	(1820)	836	159	93149
3799	13.2	2.7	0.3	chr1	48303138	48303783	(200652639)	C	L1MA4	LINE/L1	(4)	6296	5635	93151
61	4.6	0.0	0.0	chr1	48608544	48608611	(200347811)	+	(TGGA)n	Simple_repeat	1	68	(0)	93631
24572	8.4	0.8	0.8	chr1	50360655	50365607	(198590815)	+	L1PA10	LINE/L1	5236	10158	(0)	96652
2353	21.0	7.6	7.7	chr1	50898677	50899481	(198056941)	C	L1MEc	LINE/L1	(4821)	1579	761	97602
23	13.7	2.7	7.8	chr1	51519364	51519438	(197436984)	+	(CCCG)n	Simple_repeat	1	77	(0)	98834
244	31.8	7.0	0.9	chr1	51519558	51519665	(197436757)	+	MIRb	SINE/MIR	88	202	(66)	98835
323	31.6	4.2	4.2	chr1	51552035	51552176	(197404246)	C	MIRb	SINE/MIR	(8)	260	119	98924
537	24.5	7.0	0.7	chr1	51552176	51552323	(197404099)	+	L2a	LINE/L2	3269	3426	(0)	98915
686	24.0	5.8	0.5	chr1	51552329	51552521	(197403901)	C	MIR	SINE/MIR	(0)	268	10	98925
1281	18.7	0.8	0.4	chr1	51726149	51726384	(197230038)	C	L1MCa	LINE/L1	(6271)	237	1	99329
15	19.9	0.0	0.0	chr1	51726399	51726427	(197229995)	+	(T)n	Simple_repeat	1	29	(0)	99333
10093	10.1	8.6	2.8	chr1	51846450	51847931	(197108491)	C	LTR12C	LTR/ERV1	(0)	1579	3	99553
1929	14.4	0.3	3.5	chr1	52502610	52502922	(196453500)	C	AluSx3	SINE/Alu	(7)	304	2	100981
777	26.7	7.8	1.8	chr1	52502963	52503191	(196453231)	C	MIRb	SINE/MIR	(8)	260	17	100982
246	27.5	3.2	1.1	chr1	53678794	53678885	(195277537)	+	MIR3	SINE/MIR	111	204	(4)	103540
13	11.4	0.0	6.2	chr1	54695640	54695671	(194260751)	+	(CTCC)n	Simple_repeat	1	32	(0)	105684
519	26.8	5.5	6.5	chr1	54695719	54696040	(194260382)	C	L2c	LINE/L2	(13)	3374	3053	105685
3972	20.4	3.4	4.1	chr1	54724773	54725624	(194230798)	+	L1M4	LINE/L1	1	846	(6671)	105755
1521	31.1	7.8	6.6	chr1	55178950	55180039	(193776383)	+	L2a	LINE/L2	1836	2939	(480)	106583
1633	20.4	2.3	0.7	chr1	55184954	55185252	(193771170)	C	AluJo	SINE/Alu	(8)	304	1	106591
11224	17.0	7.7	5.8	chr1	55185253	55185558	(193770864)	+	L1MB7	LINE/L1	3507	3798	(2846)	106589
3496	22.8	5.4	4.9	chr1	55456846	55457309	(193499113)	+	L1ME1	LINE/L1	5342	5781	(571)	107133
648	25.8	1.3	0.0	chr1	56001603	56001757	(192954665)	+	LTR33A_	LTR/ERVL	49	205	(326)	108020
509	24.5	9.9	0.0	chr1	56001817	56002008	(192954414)	+	LTR33A_	LTR/ERVL	304	516	(4)	108020
4393	22.2	0.8	4.6	chr1	56700110	56701085	(192255337)	C	L1MB7	LINE/L1	(6514)	1003	66	109353
244	33.9	4.3	1.8	chr1	58654562	58654675	(190301747)	+	L2c	LINE/L2	3266	3382	(5)	113261
243	29.2	3.1	0.4	chr1	58799272	58799368	(190157054)	+	L2c	LINE/L2	3230	3352	(35)	113542
14	5.8	10.5	2.4	chr1	58816594	58816631	(190139791)	+	(CAGTCCT)n	Simple_repeat	1	42	(0)	113581
1172	17.5	5.4	0.0	chr1	59294582	59294792	(189661630)	+	MER58A	DNA/hAT-Charlie	2	224	(0)	114613
319	36.9	3.6	1.5	chr1	59294853	59294987	(189661435)	+	MIRc	SINE/MIR	3	140	(128)	114614
406	24.9	11.3	8.5	chr1	59295051	59295274	(189661148)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	282	114615
1982	27.1	9.7	3.3	chr1	61106759	61108657	(187847765)	C	L1ME3F	LINE/L1	(139)	6104	4068	117673
1774	16.4	5.6	0.3	chr1	61710160	61710446	(187245976)	+	AluJb	SINE/Alu	1	303	(9)	118652
686	29.3	6.2	7.9	chr1	62280846	62281286	(186675136)	+	MLT1H2	LTR/ERVL-MaLR	57	489	(0)	119898
182	24.6	8.1	0.0	chr1	62281289	62281345	(186675077)	C	MIRc	SINE/MIR	(133)	135	74	119899
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
2267	11.0	0.4	0.4	chr1	63387533	63387840	(185568582)	C	AluSx	SINE/Alu	(0)	312	2	121988
19445	10.4	3.4	2.0	chr1	63387841	63388009	(185568413)	C	L1MA3	LINE/L1	(3755)	3810	3643	121986
1692	9.2	0.0	1.0	chr1	63388012	63388218	(185568204)	C	AluSz	SINE/Alu	(107)	205	1	121989
1674	25.6	10.1	2.2	chr1	63547558	63548048	(185408374)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	16	122243
2555	9.7	0.0	0.0	chr1	64888171	64888479	(184067943)	C	AluSc	SINE/Alu	(0)	309	1	124663
513	30.3	6.2	5.0	chr1	65070205	65070444	(183885978)	+	MIRb	SINE/MIR	14	256	(12)	125022
1620	16.5	5.9	0.7	chr1	65535377	65535649	(183420773)	C	AluJo	SINE/Alu	(23)	289	2	125952
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
392	37.6	6.0	3.6	chr1	67955125	67955742	(181000680)	+	L2	LINE/L2	1088	1721	(1698)	129886
1405	25.7	7.4	1.0	chr1	70286496	70286703	(178669719)	+	L1M5	LINE/L1	4060	4288	(1858)	133138
2295	11.9	0.3	0.0	chr1	70286704	70287014	(178669408)	+	AluSx1	SINE/Alu	1	312	(0)	133139
3272	29.4	6.9	2.4	chr1	73292390	73293630	(175662792)	C	L1M4	LINE/L1	(6200)	1317	17	137193
256	26.2	7.2	0.0	chr1	75720526	75720628	(173235794)	+	L1MC4	LINE/L1	7277	7387	(655)	140337
2385	12.5	1.7	11.9	chr1	75720631	75721277	(173235145)	C	MER4E	LTR/ERV1	(9)	757	1	140338
1385	22.3	5.5	4.3	chr1	76040193	76040658	(172915764)	C	MER61E	LTR/ERV1	(54)	515	92	140836
265	20.0	8.0	1.2	chr1	76040694	76040774	(172915648)	C	LTR9A1	LTR/ERV1	(635)	93	7	140837
3103	19.1	4.8	4.0	chr1	76249078	76250180	(172706242)	C	L1MB7	LINE/L1	(0)	6184	5074	141160
1612	19.7	1.4	0.4	chr1	77988045	77988318	(170968104)	C	AluJr4	SINE/Alu	(31)	281	5	143872
1123	28.5	12.7	1.1	chr1	77988335	77988925	(170967497)	+	L2a	LINE/L2	2749	3426	(0)	143869
1784	17.0	1.5	1.5	chr1	78114653	78114981	(170841441)	+	L1MC1	LINE/L1	5999	6327	(6)	144118
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
2364	10.4	1.9	2.7	chr1	81753120	81753486	(167202936)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	148948
11	17.7	5.0	2.4	chr1	81891585	81891624	(167064798)	+	(ATTTCC)n	Simple_repeat	1	42	(0)	149120
15	23.0	4.3	0.0	chr1	82923068	82923114	(166033308)	+	(CAA)n	Simple_repeat	1	49	(0)	150488
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
2762	26.1	7.2	3.1	chr1	85311826	85312628	(163643794)	C	L1M4b	LINE/L1	(5964)	903	64	153990
4536	6.7	0.5	0.0	chr1	85312629	85313198	(163643224)	C	L1PA7	LINE/L1	(1)	6153	5581	153991
20	7.7	15.3	2.4	chr1	87328746	87328817	(161627605)	+	(GAGC)n	Simple_repeat	1	83	(0)	156907
316	34.0	15.1	0.0	chr1	87818440	87818580	(161137842)	+	MIR3	SINE/MIR	33	198	(10)	157620
1695	12.8	5.7	6.6	chr1	92935801	92936104	(156020318)	+	AluJr	SINE/Alu	1	301	(11)	165378
3065	14.5	7.7	7.2	chr1	93108076	93108766	(155847656)	C	L1M4b	LINE/L1	(4291)	2576	1888	165739
14	18.6	2.7	0.0	chr1	93681782	93681818	(155274604)	+	(GCTCCG)n	Simple_repeat	1	38	(0)	166666
3148	15.2	4.2	4.5	chr1	94572827	94573488	(154382934)	C	L1M4	LINE/L1	(5531)	1986	1327	167977
846	23.8	14.5	3.5	chr1	94728080	94728511	(154227911)	C	LTR33	LTR/ERVL	(1)	514	16	168217
13	23.7	1.9	3.7	chr1	94927275	94927327	(154029095)	+	(CCCGCC)n	Simple_repeat	1	54	(0)	168517
228	29.7	0.0	5.9	chr1	94968500	94968567	(153987855)	+	L2c	LINE/L2	3252	3315	(72)	168610
257	26.2	18.4	0.0	chr1	100249358	100249437	(148706985)	+	L2c	LINE/L2	3274	3371	(16)	176247
266	15.1	0.0	1.9	chr1	100249452	100249505	(148706917)	+	L2a	LINE/L2	3354	3406	(20)	176248
439	36.8	9.2	7.6	chr1	105765216	105765535	(143190887)	+	L2c	LINE/L2	2329	2674	(745)	183227
429	28.7	6.2	2.2	chr1	110486224	110486472	(138469950)	C	MIRb	SINE/MIR	(5)	257	1	190239
364	25.0	6.6	0.8	chr1	110492975	110493103	(138463319)	+	MamRep4096	DNA/hAT-Tip100	14	150	(276)	190248
1849	17.4	4.4	6.0	chr1	110505129	110505334	(138451088)	+	MLT1B	LTR/ERVL-MaLR	180	389	(1)	190266
520	27.4	2.1	4.5	chr1	110505473	110505671	(138450751)	+	MIRc	SINE/MIR	37	230	(38)	190269
13	25.9	0.0	8.6	chr1	110674722	110674802	(138281620)	+	G-rich	Low_complexity	1	81	(0)	190557
5494	9.9	4.0	1.6	chr1	112436661	112437513	(136518909)	C	L1PREC2	LINE/L1	(0)	6160	5278	193112
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
14784	13.0	2.7	1.0	chr1	113443930	113445320	(135511102)	+	L1M4c	LINE/L1	17	1447	(4937)	195052
350	28.5	5.4	0.0	chr1	114074201	114074323	(134882099)	C	L2c	LINE/L2	(1035)	2384	2255	196028
573	25.9	3.4	0.6	chr1	114449936	114450106	(134506316)	C	HAL1	LINE/L1	(753)	1754	1579	196595
1626	25.7	7.5	6.1	chr1	115803994	115804705	(133151717)	+	MER21C	LTR/ERVL	9	809	(129)	198734
441	18.7	5.2	0.0	chr1	115804718	115804808	(133151614)	+	MER21C	LTR/ERVL	760	855	(83)	198734
2484	19.5	6.5	2.7	chr1	116096050	116096597	(132859825)	C	L1M4	LINE/L1	(6945)	572	3	199146
1170	27.6	10.7	1.5	chr1	117481471	117481860	(131474562)	C	MLT1H	LTR/ERVL-MaLR	(9)	540	111	201373
582	17.0	2.9	0.0	chr1	119259041	119259140	(129697282)	+	U13	snRNA	2	104	(4)	203849
1680	18.1	4.5	10.2	chr1	119259141	119259201	(129697221)	+	MSTB	LTR/ERVL-MaLR	381	428	(4)	203846
334	32.2	8.8	5.2	chr1	119259221	119259492	(129696930)	C	L2c	LINE/L2	(528)	2891	2609	203844
1638	17.8	14.8	2.4	chr1	144502704	144503142	(104453280)	+	MLT2B1	LTR/ERVL	1	503	(52)	209506
1657	17.3	14.9	1.9	chr1	146431085	146431505	(102524917)	C	MLT2B1	LTR/ERVL	(20)	534	3	212646
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
1288	18.6	19.6	0.9	chr1	149141638	149142058	(99814364)	+	MLT2B4	LTR/ERVL	3	534	(20)	216741
1730	15.0	0.4	0.7	chr1	150152330	150152603	(98803819)	C	AluJb	SINE/Alu	(39)	273	1	218423
705	27.9	5.6	10.4	chr1	150955409	150955806	(98000616)	+	L2c	LINE/L2	2978	3362	(25)	220207
525	15.1	6.0	0.7	chr1	151352423	151352558	(97603864)	C	MER61E	LTR/ERV1	(452)	142	1	221025
20	25.3	4.3	0.0	chr1	151612252	151612321	(97344101)	+	(CGG)n	Simple_repeat	1	73	(0)	221596
9444	0.5	0.0	0.0	chr1	152489882	152491692	(96464730)	C	L1HS	LINE/L1	(0)	6155	4345	222854
971	22.5	15.0	1.2	chr1	152491709	152491955	(96464467)	C	L1M2	LINE/L1	(7191)	1247	961	222851
464	33.8	4.6	2.4	chr1	153966052	153966263	(94990159)	+	Tigger19b	DNA/TcMar-Tigger	125	341	(209)	225146
456	19.3	6.3	4.0	chr1	154979677	154979800	(93976622)	C	MER5B	DNA/hAT-Charlie	(0)	178	52	227135
220	27.1	2.3	8.6	chr1	155049695	155049787	(93906635)	+	L2a	LINE/L2	3339	3425	(1)	227262
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
282	35.8	3.4	3.4	chr1	155296649	155297062	(93659360)	+	L2-3_Crp	LINE/L2	559	972	(1124)	227689
4716	8.8	1.7	2.5	chr1	155642182	155643219	(93313203)	C	MER11A	LTR/ERVK	(0)	1266	1	228475
358	29.7	7.8	8.5	chr1	156367720	156368094	(92588328)	+	L2c	LINE/L2	3003	3374	(13)	230029
231	28.1	15.1	1.0	chr1	156457093	156457189	(92499233)	C	L2c	LINE/L2	(14)	3373	3261	230180
380	28.1	1.7	1.7	chr1	157030696	157030811	(91925611)	+	MIRc	SINE/MIR	61	176	(92)	231157
250	30.9	0.0	0.0	chr1	160087163	160087230	(88869192)	+	L3	LINE/CR1	4021	4088	(11)	235211
368	31.0	8.7	6.8	chr1	160435417	160435568	(88520854)	+	MamGypsy2-I	LTR/Gypsy	1088	1235	(2931)	235741
460	29.9	6.4	1.2	chr1	160435591	160435805	(88520617)	C	L2a	LINE/L2	(0)	3426	3138	235748
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
362	28.1	14.1	2.2	chr1	162292389	162292614	(86663808)	C	MIR	SINE/MIR	(0)	268	18	238901
2608	24.3	10.9	4.9	chr1	162506878	162507113	(86449309)	C	HAL1M8	LINE/L1	(1560)	1431	1153	239257
2222	11.6	1.3	0.3	chr1	162507114	162507416	(86449006)	C	AluSq	SINE/Alu	(6)	307	2	239258
4642	18.6	4.0	1.4	chr1	164454024	164454638	(84501784)	+	L1MB7	LINE/L1	1612	2250	(4617)	242125
276	25.3	2.1	1.1	chr1	164596897	164596988	(84359434)	C	MIRb	SINE/MIR	(131)	137	45	242367
2071	29.4	8.4	5.2	chr1	166544047	166544992	(82411430)	+	L1M4b	LINE/L1	11	1201	(5666)	245427
1405	33.6	6.6	6.9	chr1	167595286	167596337	(81360085)	+	L4_A_Mam	LINE/RTE-X	3890	4926	(15)	246953
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
4884	13.3	5.2	5.4	chr1	167863573	167864915	(81091507)	+	Harlequin-int	LTR/ERV1	1	1349	(5547)	247451
2286	12.5	0.3	2.2	chr1	168171380	168171691	(80784731)	C	AluSg	SINE/Alu	(4)	306	1	247938
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
13	13.2	0.0	0.0	chr1	172533420	172533444	(76422978)	+	(GAA)n	Simple_repeat	1	25	(0)	254354
8499	12.9	0.7	0.2	chr1	172563176	172564413	(76392009)	+	MSTA-int	LTR/ERVL-MaLR	1	1243	(388)	254400
401	34.0	10.0	3.0	chr1	173928639	173929179	(75027243)	+	L2c	LINE/L2	2808	3383	(4)	256346
2301	22.8	9.1	0.2	chr1	174657830	174658318	(74298104)	C	L1MB7	LINE/L1	(6978)	539	3	257478
2256	12.6	0.7	0.0	chr1	174742237	174742538	(74213884)	+	AluSz	SINE/Alu	1	304	(8)	257605
494	24.4	10.2	9.0	chr1	177884774	177884985	(71071437)	+	MER20	DNA/hAT-Charlie	1	215	(4)	262229
21	22.1	7.3	0.0	chr1	178725125	178725192	(70231230)	+	(CG)n	Simple_repeat	1	73	(0)	263565
22	9.4	0.0	0.0	chr1	178725259	178725292	(70231130)	+	(GCG)n	Simple_repeat	1	34	(0)	263566
818	15.6	4.5	0.0	chr1	179053307	179053434	(69902988)	+	FRAM	SINE/Alu	18	151	(25)	264061
1426	22.1	5.7	5.1	chr1	179209041	179209558	(69746864)	+	MER39	LTR/ERV1	6	707	(0)	264343
1068	19.2	0.5	0.0	chr1	179719285	179719487	(69236935)	+	L1MB7	LINE/L1	7	210	(7307)	265198
4193	16.2	3.1	2.2	chr1	179719476	179720976	(69235446)	+	L1MB7	LINE/L1	5043	6552	(130)	265198
1259	23.9	6.3	4.7	chr1	180339696	180340296	(68616126)	C	L2a	LINE/L2	(12)	3414	2786	266218
2507	26.6	10.7	2.6	chr1	180340300	180341102	(68615320)	C	L2a	LINE/L2	(1314)	2105	1230	266218
21151	9.9	2.8	0.7	chr1	180462253	180466165	(68490257)	+	L1PA14	LINE/L1	2346	6346	(0)	266398
399	31.0	15.4	5.1	chr1	181127263	181127459	(67828963)	C	MIRb	SINE/MIR	(22)	246	26	267516
542	27.0	6.4	1.0	chr1	182524450	182524655	(66431767)	+	L1M4a2	LINE/L1	8	225	(2431)	269607
1340	20.8	13.8	6.4	chr1	182824821	182825154	(66131268)	C	Charlie2b	DNA/hAT-Charlie	(635)	2147	1793	270113
679	27.3	2.3	3.6	chr1	182825239	182825462	(66130960)	C	Charlie2b	DNA/hAT-Charlie	(2561)	221	1	270115
1190	28.9	5.5	3.9	chr1	184159912	184160322	(64796100)	C	L2a	LINE/L2	(4)	3422	3005	272194
1410	27.6	5.2	7.1	chr1	184160371	184160917	(64795505)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	1	272195
228	30.1	6.4	7.6	chr1	184447211	184447368	(64509054)	+	Charlie4z	DNA/hAT-Charlie	2	157	(10)	272670
630	32.4	13.3	0.3	chr1	185088003	185088330	(63868092)	C	L2b	LINE/L2	(906)	2513	2137	273719
1685	8.1	0.5	0.0	chr1	185088361	185088569	(63867853)	+	AluSp	SINE/Alu	87	296	(17)	273720
13	18.3	0.0	3.0	chr1	185734404	185734436	(63221986)	+	(GGC)n	Simple_repeat	1	33	(0)	274707
1488	33.0	5.9	3.2	chr1	188822208	188822962	(60133460)	+	L1M4b	LINE/L1	76	852	(6015)	278783
658	35.5	7.8	0.9	chr1	189239611	189239931	(59716491)	C	L2	LINE/L2	(1755)	1664	1320	279305
191	26.7	0.0	1.6	chr1	198175976	198176036	(50780386)	C	MIR	SINE/MIR	(101)	161	102	290881
233	31.4	8.5	0.0	chr1	198176137	198176222	(50780200)	C	L2c	LINE/L2	(1)	3386	3293	290882
640	32.8	5.2	1.2	chr1	200443958	200444216	(48512206)	+	L4_A_Mam	LINE/RTE-X	4221	4490	(500)	294271
3057	32.0	6.4	2.5	chr1	200682430	200683183	(48273239)	C	L2c	LINE/L2	(1882)	1537	776	294775
26	8.8	1.9	5.5	chr1	200739621	200739674	(48216748)	+	(GCG)n	Simple_repeat	1	55	(0)	294917
5184	21.5	9.3	1.7	chr1	200783065	200783478	(48172944)	C	L1ME2	LINE/L1	(511)	5653	5205	294998
238	32.2	22.5	1.4	chr1	201779029	201779308	(47177114)	+	L3b	LINE/CR1	4715	5070	(162)	296622
2283	10.2	0.0	2.2	chr1	201779310	201779624	(47176798)	+	AluSx1	SINE/Alu	1	308	(4)	296623
4152	22.5	4.7	2.6	chr1	203960181	203961150	(44995272)	+	L1M4	LINE/L1	15	1006	(6511)	300679
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
661	2.7	0.0	0.0	chr1	204507028	204507102	(44449320)	C	tRNA-Lys-AAA	tRNA	(1)	75	1	301659
205	28.1	6.6	5.8	chr1	204673029	204673149	(44283273)	+	Tigger19a	DNA/TcMar-Tigger	72	193	(130)	302049
214	28.3	0.0	1.9	chr1	204673160	204673213	(44283209)	+	L2c	LINE/L2	3334	3386	(1)	302050
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
715	26.7	7.8	3.0	chr1	205750878	205751109	(43205313)	+	MIR	SINE/MIR	9	252	(10)	304034
12130	9.7	1.6	2.2	chr1	207237026	207239873	(41716549)	+	L1MA2	LINE/L1	3471	6299	(5)	306385
1366	18.6	7.3	10.4	chr1	207704917	207705366	(41251056)	C	MLT1C	LTR/ERVL-MaLR	(32)	435	1	307042
257	36.1	7.8	0.8	chr1	208015895	208016014	(40940408)	C	MIR3	SINE/MIR	(22)	186	58	307483
11	24.2	5.5	1.7	chr1	211578781	211578835	(37377587)	+	(CGCCGCG)n	Simple_repeat	1	58	(0)	312974
12	12.2	3.7	0.0	chr1	211578815	211578841	(37377581)	+	(GCCGC)n	Simple_repeat	1	28	(0)	312975
17	13.9	0.0	6.7	chr1	211578934	211578978	(37377444)	+	(CCGGAG)n	Simple_repeat	1	45	(0)	312976
1424	29.0	5.0	6.0	chr1	212053800	212054499	(36901923)	C	L1MEf	LINE/L1	(5384)	858	166	313843
1942	10.8	0.0	0.0	chr1	212564045	212564302	(36392120)	+	Tigger3c	DNA/TcMar-Tigger	345	602	(0)	314765
2383	15.0	1.2	0.5	chr1	212564303	212564711	(36391711)	+	L1MC1	LINE/L1	5922	6333	(0)	314766
691	25.5	8.3	11.8	chr1	212723374	212723848	(36232574)	+	MLT1H2	LTR/ERVL-MaLR	1	457	(32)	315037
2173	13.6	1.0	0.0	chr1	212925396	212925704	(36030718)	+	AluSx1	SINE/Alu	1	312	(0)	315446
271	36.2	8.2	4.4	chr1	212967425	212967857	(35988565)	C	L2c	LINE/L2	(433)	2986	2536	315514
5760	19.4	8.9	2.3	chr1	213082454	213083710	(35872712)	+	MLT1F-int	LTR/ERVL-MaLR	142	1484	(5)	315699
592	27.9	5.7	11.1	chr1	214468583	214468749	(34487673)	+	L1MC4	LINE/L1	7902	8042	(0)	317749
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
23372	10.1	2.8	1.0	chr1	220641626	220648062	(28308360)	+	L1PA10	LINE/L1	11	6480	(3)	326533
11	20.1	2.9	0.0	chr1	220690463	220690496	(28265926)	+	G-rich	Low_complexity	1	35	(0)	326595
212	33.6	5.3	1.8	chr1	220691803	220691911	(28264511)	C	L2b	LINE/L2	(26)	3349	3237	326596
3741	17.8	1.0	2.7	chr1	220692087	220692821	(28263601)	+	L1MB5	LINE/L1	5446	6167	(7)	326597
468	30.7	8.8	9.4	chr1	221137622	221138035	(27818387)	+	LTR16C	LTR/ERVL	79	489	(0)	327206
811	30.3	6.8	2.6	chr1	221284015	221284326	(27672096)	C	L4_A_Mam	LINE/RTE-X	(194)	4796	4471	327435
379	31.2	5.3	0.8	chr1	221284334	221284485	(27671937)	+	MIRb	SINE/MIR	2	167	(101)	327436
215	29.9	11.2	1.6	chr1	223143482	223143610	(25812812)	C	MIR1_Amn	SINE/MIR	(78)	152	10	330276
2020	26.5	13.3	6.7	chr1	223333448	223334697	(25621725)	+	HAL1	LINE/L1	3	1568	(939)	330542
810	27.9	8.9	10.1	chr1	223431481	223432040	(25524382)	C	L2a	LINE/L2	(25)	3401	2883	330675
2053	14.8	0.3	0.0	chr1	223432041	223432350	(25524072)	+	AluSx	SINE/Alu	1	311	(1)	330676
8475	6.1	0.4	0.5	chr1	223517924	223519189	(25437233)	+	L1PB	LINE/L1	4242	5505	(646)	330829
1104	31.5	11.1	2.2	chr1	223556116	223556739	(25399683)	+	MamGypLTR1a	LTR/Gypsy	32	717	(67)	330898
231	20.9	0.0	0.0	chr1	223718818	223718860	(25237562)	C	MIR	SINE/MIR	(102)	160	118	331102
528	26.6	8.1	3.8	chr1	223843939	223844173	(25112249)	C	MIRb	SINE/MIR	(14)	254	9	331312
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
2020	13.9	1.4	0.7	chr1	224506871	224507164	(24449258)	C	AluJb	SINE/Alu	(16)	296	1	332689
992	19.6	3.8	2.5	chr1	224507268	224507503	(24448919)	+	MIR	SINE/MIR	14	252	(10)	332690
380	35.4	4.8	2.8	chr1	224521904	224522191	(24434231)	+	MLT1K-int	LTR/ERVL-MaLR	6	299	(1088)	332724
1213	12.6	5.2	0.0	chr1	224593978	224594176	(24362246)	+	L1MB3	LINE/L1	5974	6183	(0)	332840
5946	21.4	8.9	6.5	chr1	224914000	224916480	(24039942)	+	LTR49-int	LTR/ERV1	2741	5288	(1043)	333357
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
912	28.4	16.1	3.5	chr1	224939930	224940381	(24016041)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	36	333389
18759	12.1	3.6	1.4	chr1	225091105	225095659	(23860763)	+	L1PA15	LINE/L1	2027	6690	(2)	333568
33589	8.9	1.1	0.2	chr1	225227592	225228797	(23727625)	+	HERVK22-int	LTR/ERVK	5632	6837	(0)	333685
2665	13.2	7.1	0.6	chr1	225228798	225229271	(23727151)	+	LTR22E	LTR/ERVK	1	507	(0)	333685
3354	20.1	8.3	5.5	chr1	225280625	225281058	(23675364)	+	L1M4a2	LINE/L1	1634	2088	(568)	333745
1904	21.9	2.2	5.9	chr1	225281065	225281582	(23674840)	C	MLT1D	LTR/ERVL-MaLR	(0)	654	1	333747
14	18.3	2.5	2.4	chr1	225427783	225427822	(23528600)	+	GA-rich	Low_complexity	1	41	(0)	333957
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
419	36.5	5.0	5.3	chr1	225655551	225655911	(23300511)	C	MER130	DNA	(141)	1453	1094	334309
2259	13.0	11.5	4.4	chr1	225850295	225850726	(23105696)	+	LTR22B1	LTR/ERVK	1	472	(54)	334686
1452	13.0	0.0	5.5	chr1	225951482	225951719	(23004703)	C	AluJb	SINE/Alu	(13)	299	75	334873
18	10.2	6.8	2.1	chr1	226186453	226186496	(22769926)	+	(GCC)n	Simple_repeat	1	47	(0)	335385
23	14.7	0.0	0.0	chr1	226649826	226649863	(22306559)	+	(A)n	Simple_repeat	1	38	(0)	336238
20	17.0	0.0	6.7	chr1	226870544	226870603	(22085819)	+	G-rich	Low_complexity	1	60	(0)	336618
16	16.4	5.0	4.8	chr1	226870678	226870737	(22085685)	+	(GGCCTGG)n	Simple_repeat	1	63	(0)	336619
5328	15.5	6.0	3.0	chr1	226934149	226935510	(22020912)	+	L1M4	LINE/L1	930	2786	(291)	336720
2057	25.8	8.6	0.9	chr1	227023887	227024812	(21931610)	+	L1ME3F	LINE/L1	5023	6026	(217)	336816
203	23.3	15.1	7.6	chr1	227285799	227285877	(21670545)	+	L2a	LINE/L2	1222	1307	(2112)	337221
3505	19.8	3.3	1.3	chr1	227285888	227286660	(21669762)	C	MSTB-int	LTR/ERVL-MaLR	(862)	789	1	337222
4873	7.5	2.8	0.5	chr1	227595290	227595885	(21360537)	C	Harlequin-int	LTR/ERV1	(6032)	864	264	337686
2721	13.1	0.0	1.5	chr1	227595866	227596269	(21360153)	C	HERVE_a-int	LTR/ERV1	(7449)	398	1	337688
1047	31.6	9.3	6.1	chr1	227651007	227651745	(21304677)	C	L1M3a	LINE/L1	(5095)	860	96	337741
22	22.6	2.4	4.7	chr1	228082878	228082977	(20873445)	+	G-rich	Low_complexity	1	97	(0)	338274
14	18.4	0.0	0.0	chr1	228109057	228109087	(20847335)	+	(CCCT)n	Simple_repeat	1	31	(0)	338301
5957	16.2	4.2	5.4	chr1	228117455	228118644	(20837778)	C	MER57-int	LTR/ERV1	(2629)	4908	3671	338308
529	19.6	0.0	0.0	chr1	228199136	228199232	(20757190)	C	L1M4b	LINE/L1	(4711)	2156	2060	338431
2854	22.7	10.5	4.9	chr1	228199219	228200342	(20756080)	C	L1M4b	LINE/L1	(5012)	1855	661	338431
15	21.3	9.3	0.0	chr1	228735308	228735361	(20221061)	+	(CG)n	Simple_repeat	1	59	(0)	339120
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
3960	23.0	2.4	2.8	chr1	228992067	228992970	(19963452)	+	L1MB7	LINE/L1	15	915	(6602)	339523
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
10268	19.7	5.3	2.6	chr1	229731898	229733231	(19223191)	+	L1M4	LINE/L1	31	1355	(6162)	340815
12	16.6	4.5	4.3	chr1	229925405	229925448	(19030974)	+	A-rich	Low_complexity	1	46	(0)	341132
2231	12.4	1.0	0.0	chr1	229925490	229925788	(19030634)	C	AluSg	SINE/Alu	(7)	303	2	341133
321	30.1	18.6	1.8	chr1	230110436	230110604	(18845818)	+	MIR	SINE/MIR	33	236	(26)	341431
12	17.9	3.1	0.0	chr1	231039984	231040015	(17916407)	+	(CGCCCG)n	Simple_repeat	1	33	(0)	342810
1895	16.7	3.9	2.0	chr1	231043266	231043620	(17912802)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	1	342813
24	18.8	1.6	3.1	chr1	231421889	231421952	(17534470)	+	(GGC)n	Simple_repeat	1	65	(0)	343471
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
255	27.9	17.2	0.0	chr1	232019036	232019146	(16937276)	C	L2c	LINE/L2	(0)	3387	3254	344384
2348	21.6	3.0	2.5	chr1	232204356	232204700	(16751722)	+	L1MD2	LINE/L1	6176	6527	(223)	344643
54	0.0	0.0	0.0	chr1	232204701	232204746	(16751676)	+	(AC)n	Simple_repeat	1	46	(0)	344646
2348	21.6	3.0	2.5	chr1	232204747	232204969	(16751453)	+	L1MD2	LINE/L1	6528	6747	(3)	344643
1595	20.9	1.3	1.6	chr1	232212262	232212577	(16743845)	C	L1M4	LINE/L1	(7198)	319	5	344659
194	34.1	4.2	0.7	chr1	232311880	232312015	(16644407)	+	L2	LINE/L2	2672	2812	(607)	344804
22	7.9	2.3	4.4	chr1	232630076	232630119	(16326303)	+	(CTC)n	Simple_repeat	1	45	(0)	345178
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
576	29.4	2.4	0.6	chr1	233710421	233710616	(15245806)	+	MER21C	LTR/ERVL	9	301	(637)	346794
273	23.6	0.0	0.0	chr1	233710634	233710688	(15245734)	+	MER77B	LTR/ERVL	279	333	(367)	346795
13	18.8	0.0	0.0	chr1	234478558	234478588	(14477834)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	347927
12	19.3	0.0	5.1	chr1	234600126	234600164	(14356258)	+	G-rich	Low_complexity	1	39	(0)	348157
37	15.3	0.0	1.4	chr1	234600189	234600258	(14356164)	+	(GCCCC)n	Simple_repeat	1	70	(0)	348158
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
323	27.0	19.7	0.0	chr1	234876693	234876851	(14079571)	+	MIRb	SINE/MIR	3	200	(68)	348586
2016	13.0	2.0	9.2	chr1	234977954	234978029	(13978393)	C	MLT1B	LTR/ERVL-MaLR	(303)	87	38	348767
15	23.5	2.1	2.0	chr1	234978170	234978217	(13978205)	+	(TGAA)n	Simple_repeat	1	49	(0)	348769
2230	9.9	0.0	0.0	chr1	235030060	235030372	(13926050)	C	AluSq2	SINE/Alu	(0)	313	1	348867
335	31.9	4.7	0.7	chr1	235030419	235030560	(13925862)	+	L1MEd	LINE/L1	408	555	(6531)	348866
633	26.1	7.2	9.2	chr1	235030614	235030719	(13925703)	+	L1MEf	LINE/L1	24	144	(6403)	348868
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
15	18.2	2.1	4.2	chr1	235649786	235649854	(13306568)	+	(CCCCG)n	Simple_repeat	1	67	(0)	350172
2246	11.0	0.0	0.0	chr1	235991343	235991632	(12964790)	C	AluSz	SINE/Alu	(22)	290	1	350770
16	16.0	2.9	0.0	chr1	235991712	235991746	(12964676)	+	(AGC)n	Simple_repeat	1	36	(0)	350771
18796	13.6	6.9	1.1	chr1	236198505	236202408	(12754014)	C	L1PB1	LINE/L1	(1532)	5330	1113	351172
272	30.1	15.8	0.0	chr1	237005604	237005736	(11950686)	+	L2a	LINE/L2	3269	3426	(0)	352629
34	3.0	0.0	0.0	chr1	237005748	237005781	(11950641)	+	(AC)n	Simple_repeat	1	34	(0)	352630
427	29.8	13.4	3.2	chr1	237864245	237864525	(11091897)	C	LTR88a	LTR/Gypsy?	(17)	799	486	353891
17	21.6	2.1	0.0	chr1	240091879	240091926	(8864496)	+	(AGCCGC)n	Simple_repeat	1	49	(0)	357136
2002	29.2	6.1	4.3	chr1	240399325	240400238	(8556184)	+	L1M4b	LINE/L1	62	1221	(5646)	357573
23	22.7	1.6	0.0	chr1	241356738	241356799	(7599623)	+	(GCGCCCG)n	Simple_repeat	1	63	(0)	359175
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
7007	14.4	4.6	1.7	chr1	241690485	241691519	(7264903)	+	L1MC1	LINE/L1	1455	2512	(3809)	359665
579	10.2	7.8	0.8	chr1	241691517	241691635	(7264787)	+	L1MC1	LINE/L1	4124	4251	(2070)	359665
2720	15.9	6.5	1.6	chr1	241691636	241691731	(7264691)	+	L1MC1	LINE/L1	4457	4550	(1771)	359665
2349	11.9	0.3	0.0	chr1	241691732	241692042	(7264380)	+	AluSx1	SINE/Alu	1	312	(0)	359667
196	21.7	0.0	2.1	chr1	244083086	244083132	(4873290)	C	L2	LINE/L2	(1406)	2013	1968	363561
17	7.5	6.2	5.9	chr1	244158992	244159041	(4797381)	+	(TCTCCT)n	Simple_repeat	1	50	(0)	363671
2218	13.2	4.8	5.5	chr1	244735240	244735398	(4221024)	+	LTR23	LTR/ERV1	283	434	(3)	364640
3982	9.6	3.0	1.1	chr1	244735453	244736010	(4220412)	+	MER61E	LTR/ERV1	1	569	(0)	364644
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
329	29.7	9.7	5.7	chr1	245537943	245538453	(3417969)	C	L2-3_Crp	LINE/L2	(1029)	1067	534	366216
19503	13.8	4.2	8.0	chr1	245723516	245726086	(3230336)	+	L1PA11	LINE/L1	116	2576	(3755)	366454
17	15.3	0.0	0.0	chr10	4263254	4263282	(129534140)	+	(TG)n	Simple_repeat	1	29	(0)	376267
21	19.7	6.2	0.0	chr10	4263282	4263291	(129534131)	+	(TAGA)n	Simple_repeat	1	31	(37)	376268
17	17.6	4.4	0.0	chr10	4263292	4263336	(129534086)	+	(GATAGAT)n	Simple_repeat	1	47	(0)	376269
2226	18.1	3.4	2.2	chr10	5419736	5420151	(128377271)	C	L1M4b	LINE/L1	(4610)	2257	1834	377739
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
12	12.0	3.7	0.0	chr10	6203364	6203390	(127594032)	+	(GCCGG)n	Simple_repeat	1	28	(0)	379103
299	16.1	3.5	0.0	chr10	7982964	7983019	(125814403)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	538	381942
535	25.0	4.0	0.8	chr10	10869835	10869954	(122927468)	+	FLAM_A	SINE/Alu	1	124	(18)	386229
2020	18.4	2.7	5.8	chr10	13079205	13079874	(120717548)	+	HERVIP10FH-int	LTR/ERV1	4	829	(4273)	390064
14	14.4	5.0	2.4	chr10	13299914	13299953	(120497469)	+	(GGCGCC)n	Simple_repeat	1	42	(0)	390494
2240	14.0	4.2	1.9	chr10	16465697	16466068	(117331354)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	395883
1309	26.3	6.7	3.6	chr10	16487167	16487615	(117309807)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	4	395932
414	36.3	10.7	1.3	chr10	17199565	17199868	(116597554)	C	L2	LINE/L2	(437)	2982	2647	396957
8989	8.9	0.2	0.5	chr10	21108904	21110137	(112687285)	C	L1P3	LINE/L1	(1899)	4247	3018	402987
1273	23.9	11.7	2.2	chr10	21110137	21110586	(112686836)	C	L1ME1	LINE/L1	(2449)	3870	3373	402983
16	7.8	0.0	3.5	chr10	21173846	21173874	(112623548)	+	(CGG)n	Simple_repeat	1	29	(0)	403076
13	10.7	6.7	0.0	chr10	21173923	21173952	(112623470)	+	(GGCG)n	Simple_repeat	1	32	(0)	403077
18	11.2	0.0	6.8	chr10	21174033	21174090	(112623332)	+	(CTCCGG)n	Simple_repeat	1	54	(0)	403078
14	25.5	1.9	1.9	chr10	21174132	21174158	(112623264)	+	(CGCGCC)n	Simple_repeat	1	52	(0)	403079
13	8.7	4.0	0.0	chr10	21725061	21725085	(112072337)	+	(AAAAC)n	Simple_repeat	1	26	(0)	404247
3435	19.5	6.5	3.0	chr10	21824712	21824761	(111972661)	C	L1MB4	LINE/L1	(0)	6353	6306	404394
22	29.0	0.0	0.0	chr10	22003318	22003381	(111794041)	+	(CAG)n	Simple_repeat	1	64	(0)	404666
8667	18.6	3.6	1.7	chr10	22026348	22028223	(111769199)	C	L1M4	LINE/L1	(5585)	1932	18	404702
527	24.7	13.2	5.2	chr10	22088993	22089282	(111708140)	C	L1ME3	LINE/L1	(2)	6160	5844	404783
22740	7.4	0.5	0.7	chr10	22089278	22095453	(111701969)	+	L1PA6	LINE/L1	175	6315	(12)	404784
1947	19.5	15.7	3.6	chr10	23370068	23370685	(110426737)	C	MER39	LTR/ERV1	(0)	707	1	406715
253	31.5	2.2	8.0	chr10	24672030	24672229	(109125193)	+	L2-3_Crp	LINE/L2	627	813	(1283)	408856
1057	24.9	11.7	0.6	chr10	24672237	24672571	(109124851)	+	L2	LINE/L2	2021	2397	(1022)	408855
1764	14.5	10.6	0.9	chr10	24737112	24737459	(109059963)	+	LOR1b	LTR/ERV1	1	386	(75)	408989
1164	24.3	12.2	6.0	chr10	26525629	26526123	(107271299)	C	MER39	LTR/ERV1	(0)	707	1	411834
603	35.1	8.3	1.4	chr10	27489818	27490308	(106307114)	C	MLT1K	LTR/ERVL-MaLR	(62)	533	6	413515
1794	18.2	1.0	0.3	chr10	28410087	28410388	(105387034)	C	AluJr	SINE/Alu	(8)	304	1	415033
229	31.8	12.9	0.5	chr10	28551514	28551737	(105245685)	+	MARNA	DNA/TcMar-Mariner	185	440	(146)	415339
31	0.0	0.0	0.0	chr10	28687525	28687551	(105109871)	+	(TG)n	Simple_repeat	1	27	(0)	415558
241	19.1	0.0	1.3	chr10	29958516	29958565	(103838857)	C	L2b	LINE/L2	(13)	3374	3324	417794
1354	31.6	8.9	7.5	chr10	32327946	32329040	(101468382)	+	MLT1I-int	LTR/ERVL-MaLR	244	1355	(32)	421799
9596	18.0	3.8	1.4	chr10	35294089	35295019	(98502403)	C	L1MB7	LINE/L1	(1825)	4321	3367	426355
317	22.2	0.0	0.0	chr10	36048489	36048560	(97748862)	C	L1MB8	LINE/L1	(4748)	2119	2048	427468
2094	27.6	3.7	2.3	chr10	36048565	36049173	(97748249)	C	L1MB8	LINE/L1	(6243)	624	7	427468
313	22.4	0.0	1.3	chr10	42546691	42546767	(91250655)	+	L1MB2	LINE/L1	5113	5188	(1450)	432190
4498	17.2	3.7	0.8	chr10	42546765	42548019	(91249403)	+	L1MB2	LINE/L1	5322	6627	(42)	432190
1485	14.9	0.0	6.7	chr10	42807466	42807720	(90989702)	C	AluJr	SINE/Alu	(7)	305	68	432578
1827	19.4	8.2	5.9	chr10	42807721	42808263	(90989159)	C	L1MD2	LINE/L1	(622)	5737	5168	432577
15	16.4	2.2	4.3	chr10	43229415	43229459	(90567963)	+	G-rich	Low_complexity	1	46	(0)	433109
2277	11.1	0.0	0.0	chr10	43372287	43372584	(90424838)	C	AluSx1	SINE/Alu	(14)	298	1	433365
12	18.9	2.7	0.0	chr10	43372585	43372599	(90424823)	+	(ATGT)n	Simple_repeat	3	17	(0)	433366
673	25.8	5.5	2.2	chr10	43372603	43372828	(90424594)	C	MIR	SINE/MIR	(10)	252	19	433367
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
1473	24.9	14.8	2.7	chr10	44865190	44865960	(88931462)	+	L1MEc	LINE/L1	48	927	(5473)	435328
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
630	22.7	9.2	2.1	chr10	47384905	47385292	(86412130)	+	L1M5	LINE/L1	5117	5536	(706)	439115
1023	23.5	7.8	3.9	chr10	48384864	48385279	(85412143)	C	LTR56	LTR/ERV1	(0)	445	12	440481
5298	23.8	5.6	3.5	chr10	48614529	48616017	(85181405)	+	L1M4	LINE/L1	4	1525	(5992)	440789
16	22.3	2.6	0.0	chr10	58512701	58512738	(75284684)	+	(GT)n	Simple_repeat	1	39	(0)	454284
2392	16.0	3.5	5.7	chr10	59608267	59608889	(74188533)	+	L1MD2	LINE/L1	5102	5717	(642)	455804
1255	23.9	8.4	3.2	chr10	59608884	59609037	(74188385)	+	L1MD2	LINE/L1	5967	6136	(223)	455804
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
1922	23.7	5.0	6.4	chr10	63245955	63246685	(70550737)	+	L1MA4	LINE/L1	2358	3084	(4481)	461412
1597	22.4	7.3	3.5	chr10	63462424	63462880	(70334542)	+	MLT1D	LTR/ERVL-MaLR	1	476	(29)	461837
1887	25.8	4.7	6.0	chr10	66815126	66815706	(66981716)	+	L1MB7	LINE/L1	15	587	(6930)	466633
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
1887	12.5	0.0	6.0	chr10	69439686	69440004	(64357418)	+	AluSx1	SINE/Alu	3	302	(10)	471603
12	24.6	0.0	2.5	chr10	69630455	69630494	(64166928)	+	(GCGG)n	Simple_repeat	1	40	(0)	471963
489	23.7	7.8	0.0	chr10	69758388	69758505	(64038917)	+	MIRb	SINE/MIR	54	181	(87)	472205
15	7.3	6.9	0.0	chr10	70146167	70146195	(63651227)	+	(GCA)n	Simple_repeat	1	31	(0)	472842
189	29.3	4.3	11.9	chr10	70322177	70322327	(63475095)	C	MIR3	SINE/MIR	(62)	146	8	473196
14	27.6	0.0	3.6	chr10	70888447	70888502	(62908920)	+	(TCCCCC)n	Simple_repeat	1	56	(0)	474271
12	16.6	2.1	8.2	chr10	70888576	70888623	(62908799)	+	(GGCCG)n	Simple_repeat	1	49	(0)	474272
13	24.9	1.0	3.1	chr10	71319183	71319233	(62478189)	+	G-rich	Low_complexity	1	49	(0)	474994
12	16.5	5.9	0.0	chr10	71319274	71319307	(62478115)	+	(GCG)n	Simple_repeat	1	36	(0)	474995
1966	7.1	5.3	4.1	chr10	71430527	71430821	(62366601)	+	AluSx1	SINE/Alu	1	299	(13)	475263
598	29.3	4.3	3.9	chr10	71430822	71431012	(62366410)	+	L1ME4b	LINE/L1	491	683	(209)	475262
16	16.4	11.4	1.3	chr10	73785769	73785838	(60011584)	+	(CCCTCGG)n	Simple_repeat	1	78	(0)	479943
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
647	29.4	4.3	2.6	chr10	73998479	73998705	(59798717)	+	MIRb	SINE/MIR	30	260	(8)	480358
2355	10.8	0.0	0.0	chr10	74295180	74295476	(59501946)	+	AluSq2	SINE/Alu	1	297	(16)	480964
273	24.9	7.4	12.1	chr10	74295477	74295605	(59501817)	C	L1M5	LINE/L1	(878)	5268	5145	480962
962	25.6	11.2	3.6	chr10	74295618	74296116	(59501306)	C	L1M5	LINE/L1	(2524)	3622	3081	480962
396	32.1	5.4	4.9	chr10	74835348	74835570	(58961852)	C	Charlie15a	DNA/hAT-Charlie	(0)	224	1	481965
420	21.6	21.1	1.1	chr10	74835571	74835776	(58961646)	+	MIRb	SINE/MIR	15	268	(0)	481964
348	25.8	4.8	4.8	chr10	75159483	75159608	(58637814)	+	LTR16C	LTR/ERVL	2	127	(362)	482553
372	28.5	3.8	0.0	chr10	75159762	75159912	(58637510)	+	LTR16C	LTR/ERVL	316	472	(17)	482553
408	29.9	9.9	7.3	chr10	75344369	75344739	(58452683)	+	MLT1J	LTR/ERVL-MaLR	112	493	(19)	482937
15	19.6	0.0	0.0	chr10	75401501	75401535	(58395887)	+	(GGAGCA)n	Simple_repeat	1	35	(0)	483053
16	24.5	0.0	6.2	chr10	75401683	75401747	(58395675)	+	(GCTGC)n	Simple_repeat	1	65	(0)	483054
291	33.6	4.3	7.6	chr10	77773976	77774291	(56023131)	C	MamGypLTR3a	LTR/Gypsy	(52)	929	625	486571
1875	13.8	0.0	2.1	chr10	78771132	78771420	(55026002)	C	AluSz	SINE/Alu	(29)	283	1	488411
230	36.0	2.1	4.1	chr10	78771421	78771467	(55025955)	+	MIRb	SINE/MIR	150	194	(74)	488409
297	29.2	8.3	6.7	chr10	78771624	78771788	(55025634)	C	MIRb	SINE/MIR	(17)	251	84	488412
857	16.2	0.0	1.2	chr10	78864492	78864653	(54932769)	+	MER96B	DNA/hAT-Tip100	1	160	(257)	488604
378	29.2	12.9	5.0	chr10	78864674	78865135	(54932287)	C	LTR78	LTR/ERV1	(98)	1206	703	488605
4152	22.5	6.6	5.4	chr10	81263402	81263792	(52533630)	+	L1M4	LINE/L1	14	438	(7079)	492379
21242	14.6	3.5	2.0	chr10	84412871	84416401	(49381021)	C	L1PA11	LINE/L1	(2726)	3605	4	496830
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
2382	11.2	0.3	0.0	chr10	86647398	86647708	(47149714)	C	AluSz6	SINE/Alu	(0)	312	1	499916
482	19.1	0.0	6.0	chr10	87033566	87033665	(46763757)	+	L1M4	LINE/L1	168	261	(7256)	500599
9011	18.5	1.1	8.9	chr10	87033665	87033940	(46763482)	C	L1PA13	LINE/L1	(2033)	4733	4465	500600
403	28.4	4.5	0.7	chr10	87203523	87203671	(46593751)	+	LTR41B	LTR/ERVL	1	155	(603)	500923
2377	15.2	7.4	0.9	chr10	87585968	87586432	(46210990)	C	LTR44	LTR/ERV1	(3)	516	19	501500
83	29.0	4.6	0.3	chr10	87724527	87724852	(46072570)	+	(TA)n	Simple_repeat	1	341	(0)	501730
18	0.0	0.0	0.0	chr10	87724852	87724871	(46072551)	+	(AC)n	Simple_repeat	1	20	(0)	501731
2016	16.6	5.2	0.4	chr10	87724872	87725234	(46072188)	C	MLT2D	LTR/ERVL	(42)	525	1	501729
2842	17.4	5.2	0.6	chr10	87792062	87792597	(46004825)	+	MER68	LTR/ERVL	2	563	(0)	501839
815	11.6	0.9	0.0	chr10	87854623	87854734	(45942688)	C	AluJr	SINE/Alu	(179)	133	21	501919
860	23.2	8.0	0.5	chr10	87854735	87854942	(45942480)	+	MLT1H-int	LTR/ERVL-MaLR	647	871	(538)	501918
600	16.1	8.3	5.3	chr10	87905303	87905453	(45891969)	C	L1MB5	LINE/L1	(0)	6174	6019	501980
708	27.6	4.2	1.0	chr10	88093182	88093386	(45704036)	+	MIRb	SINE/MIR	9	220	(48)	502314
910	28.9	8.4	2.5	chr10	89189227	89189627	(44607795)	+	L1M4	LINE/L1	16	442	(7075)	504012
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
13	24.7	5.7	2.7	chr10	92689910	92689979	(41107443)	+	(GGAGCGC)n	Simple_repeat	1	74	(0)	509677
3096	22.0	8.8	9.5	chr10	92813460	92814163	(40983259)	+	L2	LINE/L2	1443	2160	(1259)	509948
269	11.4	0.0	0.0	chr10	92814164	92814198	(40983224)	+	LTR1F2	LTR/ERV1	85	119	(620)	509951
3096	22.0	8.8	9.5	chr10	92814199	92814728	(40982694)	+	L2	LINE/L2	2161	2702	(717)	509948
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
2756	22.6	1.9	0.9	chr10	95133925	95134563	(38662859)	C	LTR9D	LTR/ERV1	(0)	645	1	513805
636	23.0	1.1	1.7	chr10	95134564	95134740	(38662682)	C	L1M3	LINE/L1	(3406)	2734	2559	513810
717	30.4	4.2	0.6	chr10	95134712	95135106	(38662316)	C	L1MEg	LINE/L1	(4681)	1952	1559	513811
542	34.0	0.0	1.5	chr10	95480472	95480668	(38316754)	+	MIR3	SINE/MIR	9	202	(6)	514343
256	30.5	13.2	3.8	chr10	95480691	95480964	(38316458)	C	L2b	LINE/L2	(0)	3387	3072	514344
516	22.7	8.3	0.7	chr10	95561764	95561918	(38235504)	+	MIR	SINE/MIR	94	261	(1)	514502
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
15	25.1	2.8	4.1	chr10	96720434	96720504	(37076918)	+	G-rich	Low_complexity	1	73	(0)	516503
12	15.7	2.6	5.0	chr10	96720577	96720615	(37076807)	+	(GCCCGCG)n	Simple_repeat	1	40	(0)	516504
22	24.1	1.4	2.7	chr10	96832658	96832729	(36964693)	+	(CCTCCC)n	Simple_repeat	1	73	(0)	516803
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
6384	8.3	2.8	0.7	chr10	97560442	97561325	(36236097)	C	Harlequin-int	LTR/ERV1	(5993)	903	1	518216
949	29.2	6.6	1.6	chr10	97834390	97834794	(35962628)	+	MLT1L	LTR/ERVL-MaLR	72	604	(6)	518841
23441	14.2	2.4	1.0	chr10	98934031	98936599	(34860823)	C	L1PA10	LINE/L1	(3753)	2708	149	520729
18	13.2	0.0	0.0	chr10	102230673	102230705	(31566717)	+	(GGC)n	Simple_repeat	1	33	(0)	526553
15	22.3	5.1	1.6	chr10	102230750	102230808	(31566614)	+	(GCCCGG)n	Simple_repeat	1	62	(0)	526554
2390	8.6	0.0	0.0	chr10	102724422	102724711	(31072711)	+	AluSc	SINE/Alu	1	290	(19)	527465
2539	19.7	6.8	7.9	chr10	102724712	102725435	(31071987)	C	L1MCb	LINE/L1	(4896)	1149	434	527460
334	29.0	12.1	3.2	chr10	102781343	102781519	(31015903)	C	MIRc	SINE/MIR	(57)	211	27	527581
26	14.1	8.6	0.0	chr10	102918607	102918676	(30878746)	+	(GCGGCT)n	Simple_repeat	1	76	(0)	527859
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
2261	13.3	2.5	2.7	chr10	103504292	103504694	(30292728)	C	L1MC3	LINE/L1	(266)	7519	7118	529101
1790	16.4	1.3	2.3	chr10	104425953	104426256	(29371166)	+	AluJb	SINE/Alu	1	301	(11)	530697
2180	7.6	0.0	0.0	chr10	110140772	110141033	(23656389)	+	AluSc	SINE/Alu	25	286	(23)	538961
198	26.1	0.0	0.0	chr10	110221958	110222003	(23575419)	C	UCON80_AMi	Unknown	(32)	190	145	539131
515	16.9	6.1	0.0	chr10	110256633	110256729	(23540693)	+	L1M4	LINE/L1	5368	5470	(974)	539178
5648	7.0	3.0	0.0	chr10	110448956	110449933	(23347489)	+	L1M1	LINE/L1	3327	4339	(3226)	539535
829	25.4	8.0	2.3	chr10	110745953	110746381	(23051041)	C	MLT1H	LTR/ERVL-MaLR	(16)	473	5	540083
477	27.1	11.2	1.0	chr10	112621167	112621367	(21176055)	C	MER103C	DNA/hAT-Charlie	(4)	293	70	542946
258	31.5	6.1	2.1	chr10	112876791	112876884	(20920538)	C	MER91C	DNA/hAT-Tip100	(2)	138	41	543372
420	30.1	3.2	2.5	chr10	113001913	113002069	(20795353)	+	MIRb	SINE/MIR	43	200	(68)	543633
203	26.6	4.5	0.0	chr10	113168694	113168757	(20628665)	+	L2b	LINE/L2	2758	2824	(595)	543849
506	24.9	8.4	10.6	chr10	113168773	113168979	(20628443)	C	MIRb	SINE/MIR	(41)	227	26	543850
484	27.2	17.4	5.5	chr10	113430521	113430919	(20366503)	+	MLT1H	LTR/ERVL-MaLR	70	547	(2)	544303
2760	23.0	5.1	0.2	chr10	113922816	113923450	(19873972)	+	L1M4b	LINE/L1	13	680	(6187)	545076
1878	11.7	0.4	0.4	chr10	114726554	114726802	(19070620)	+	AluSx1	SINE/Alu	56	304	(8)	546410
2382	15.4	5.0	4.0	chr10	114726803	114726944	(19070478)	C	MSTA	LTR/ERVL-MaLR	(286)	142	1	546409
549	27.6	9.3	4.7	chr10	115053533	115053787	(18743635)	+	LTR78	LTR/ERV1	195	462	(842)	547003
20160	16.1	2.2	0.8	chr10	115272250	115275415	(18522007)	C	ERVL-B4-int	LTR/ERVL	(600)	5114	1894	547281
10340	24.1	5.4	2.9	chr10	115417708	115420039	(18377383)	+	L1MA6	LINE/L1	1776	4175	(3387)	547418
13	4.1	3.7	3.6	chr10	115951316	115951342	(17846080)	+	(TAAAA)n	Simple_repeat	1	28	(0)	548102
15	30.2	1.4	2.7	chr10	117375228	117375299	(16422123)	+	(CCCGCC)n	Simple_repeat	1	73	(0)	550342
569	21.1	8.4	2.6	chr10	117654064	117654219	(16143203)	C	MIR3	SINE/MIR	(6)	202	37	550825
1011	22.7	6.3	10.5	chr10	117654242	117654659	(16142763)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	85	550826
650	24.4	11.1	5.5	chr10	118541617	118541996	(15255426)	+	MLT1H2	LTR/ERVL-MaLR	92	524	(25)	552215
12	24.6	1.7	5.1	chr10	119206853	119206910	(14590512)	+	(CCGCGCG)n	Simple_repeat	1	59	(0)	553462
14	0.0	4.8	0.0	chr10	119356715	119356735	(14440687)	+	(AAC)n	Simple_repeat	1	22	(0)	553764
4524	18.2	13.7	1.8	chr10	120189105	120190076	(13607346)	C	L1M4b	LINE/L1	(5758)	1109	3	555270
845	20.8	5.4	3.0	chr10	121096631	121096828	(12700594)	C	MER58A	DNA/hAT-Charlie	(3)	221	19	556635
1039	21.3	12.2	8.8	chr10	121096839	121097224	(12700198)	C	MLT1H	LTR/ERVL-MaLR	(60)	489	89	556636
2202	23.8	6.4	2.9	chr10	122385744	122386745	(11410677)	C	L1ME1	LINE/L1	(281)	5898	4846	558796
1920	20.6	11.1	1.6	chr10	122386738	122387434	(11409988)	C	L1ME1	LINE/L1	(2522)	3624	2853	558796
3960	23.9	7.7	6.9	chr10	124252095	124252411	(9545011)	+	L1M4b	LINE/L1	7	315	(6552)	561585
2048	13.5	0.0	0.0	chr10	124252412	124252708	(9544714)	C	AluSz	SINE/Alu	(15)	297	1	561586
16	10.1	2.9	2.9	chr10	124917084	124917117	(8880305)	+	(GGC)n	Simple_repeat	1	35	(0)	562765
39	2.6	0.0	0.0	chr10	124917175	124917214	(8880208)	+	(CGC)n	Simple_repeat	1	40	(0)	562766
17	16.4	0.0	0.0	chr10	124917226	124917259	(8880163)	+	GA-rich	Low_complexity	1	34	(0)	562767
4587	15.2	5.6	2.5	chr10	124924306	124924910	(8872512)	C	L1MB7	LINE/L1	(5)	6179	5557	562785
291	29.1	7.3	0.8	chr10	125632352	125632479	(8164943)	+	L2a	LINE/L2	3287	3423	(3)	563807
377	23.9	6.6	1.3	chr10	125768212	125768349	(8029073)	C	MIR1_Amn	SINE/MIR	(39)	169	30	563979
7777	22.9	8.1	9.6	chr10	127509155	127510138	(6287284)	+	HAL1M8	LINE/L1	27	1083	(1908)	566267
543	27.1	12.7	8.7	chr10	128121716	128122106	(5675316)	+	L1ME3B	LINE/L1	5724	6131	(111)	567028
1778	24.5	6.0	8.2	chr10	129320282	129321033	(4476389)	C	L1ME1	LINE/L1	(11)	6168	5435	568383
683	29.9	11.2	9.8	chr10	130739059	130740222	(3057200)	C	L2a	LINE/L2	(271)	3155	1982	569842
17	23.3	0.0	0.0	chr10	132036428	132036472	(1760950)	+	(CGGCGCC)n	Simple_repeat	1	45	(0)	571258
279	28.6	6.0	1.6	chr10	133359955	133360082	(437340)	+	Charlie22a	DNA/hAT-Charlie	60	193	(298)	572436
17	29.6	0.0	2.9	chr11	6611930	6611998	(128474624)	+	(CCCCG)n	Simple_repeat	1	69	(0)	581578
1959	25.6	5.3	3.7	chr11	7875653	7876167	(127210455)	+	L1M4b	LINE/L1	1	524	(6343)	583185
858	28.0	6.1	10.2	chr11	10114250	10115020	(124971602)	C	L1MEd	LINE/L1	(5782)	1321	585	587059
67	1.6	0.0	0.0	chr11	10366351	10366412	(124720210)	+	(TG)n	Simple_repeat	1	62	(0)	587451
650	30.1	13.0	4.0	chr11	10366413	10366492	(124720130)	C	L1M5	LINE/L1	(2459)	3687	3593	587450
3850	23.9	10.4	4.3	chr11	10597656	10597894	(124488728)	C	L1ME4a	LINE/L1	(6250)	853	618	587764
878	30.6	7.7	2.5	chr11	10598031	10598425	(124488197)	C	L1ME4a	LINE/L1	(6664)	439	23	587764
3206	20.3	7.8	1.5	chr11	12063900	12064804	(123021818)	C	L1ME1	LINE/L1	(1)	6178	5206	590170
2104	13.2	1.3	0.7	chr11	12064805	12065108	(123021514)	C	AluSz6	SINE/Alu	(6)	306	1	590171
2209	22.9	9.7	6.1	chr11	12689722	12689958	(122396664)	C	L1MC5	LINE/L1	(45)	9259	9020	591175
283	32.0	0.0	0.0	chr11	14279638	14279712	(120806910)	+	L3	LINE/CR1	4023	4097	(2)	593604
346	27.6	7.2	3.3	chr11	14279787	14279906	(120806716)	+	MIRb	SINE/MIR	68	192	(76)	593605
47	7.3	0.0	0.0	chr11	14389659	14389716	(120696906)	+	(AT)n	Simple_repeat	1	58	(0)	593825
448	27.2	15.2	1.2	chr11	15506087	15506250	(119580372)	C	L3	LINE/CR1	(72)	4027	3837	595624
213	31.6	14.3	0.9	chr11	15506290	15506404	(119580218)	C	L2a	LINE/L2	(0)	3426	3294	595625
603	28.0	8.5	2.0	chr11	15506394	15506590	(119580032)	C	L2a	LINE/L2	(338)	3081	2871	595625
1341	26.5	17.1	1.2	chr11	17540352	17541400	(117545222)	+	L2a	LINE/L2	2168	3426	(0)	598925
22923	8.3	1.3	1.1	chr11	20070959	20074940	(115011682)	C	L1PA7	LINE/L1	(3)	6151	2151	603304
16	23.3	0.0	0.0	chr11	27423085	27423119	(107663503)	+	A-rich	Low_complexity	1	35	(0)	613909
316	25.0	5.5	3.7	chr11	32577578	32577685	(102508937)	+	L1ME3A	LINE/L1	6057	6166	(7)	621892
216	30.1	11.2	7.2	chr11	32577762	32577872	(102508750)	+	MIRb	SINE/MIR	26	141	(127)	621893
20	14.7	6.7	0.0	chr11	32577874	32577918	(102508704)	+	(CA)n	Simple_repeat	1	48	(0)	621894
2261	11.5	1.7	0.0	chr11	32577922	32578209	(102508413)	+	AluSz	SINE/Alu	2	294	(18)	621895
21438	7.8	1.0	0.3	chr11	33725829	33729678	(101356944)	+	L1PA7	LINE/L1	2283	6154	(0)	623967
338	21.9	7.4	10.5	chr11	33729731	33729883	(101356739)	C	MERX	DNA/TcMar-Tigger	(30)	726	579	623968
2388	8.9	0.3	0.0	chr11	36111595	36111896	(98974726)	C	AluSg7	SINE/Alu	(6)	303	1	627875
6673	18.7	3.9	1.8	chr11	36736024	36737707	(98348915)	C	L1M3f	LINE/L1	(4601)	2964	1247	628865
681	30.1	4.2	4.8	chr11	46550119	46550658	(88535964)	C	L1MC5a	LINE/L1	(483)	2294	1994	644137
406	24.8	14.5	1.5	chr11	46550694	46550804	(88535818)	+	L1MC4a	LINE/L1	5707	5835	(2047)	644139
2447	6.7	0.0	3.5	chr11	46550805	46551118	(88535504)	+	AluY	SINE/Alu	1	303	(8)	644140
13	21.3	4.5	5.7	chr11	46918203	46918269	(88168353)	+	G-rich	Low_complexity	1	70	(0)	644903
12	19.3	0.0	5.1	chr11	47565815	47565853	(87520769)	+	(CCCCGT)n	Simple_repeat	1	39	(0)	646186
4277	20.3	4.0	3.6	chr11	49995075	49996782	(85089840)	+	LTR25-int	LTR/ERV1	1	1991	(6928)	649767
2003	20.0	6.2	12.1	chr11	57524777	57525373	(77561249)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	653905
365	25.3	0.0	3.3	chr11	58712064	58712153	(76374469)	+	MLT1H	LTR/ERVL-MaLR	388	474	(75)	655879
496	28.3	2.9	2.9	chr11	58712178	58712348	(76374274)	C	MIRb	SINE/MIR	(29)	239	69	655880
799	14.2	1.6	0.0	chr11	59549189	59549308	(75537314)	C	AluJo	SINE/Alu	(190)	122	1	656942
384	26.0	9.3	0.7	chr11	59549351	59549497	(75537125)	+	MIR	SINE/MIR	45	205	(57)	656943
2124	26.1	8.3	5.3	chr11	60530475	60530692	(74555930)	+	L1M4a2	LINE/L1	9	224	(2432)	658504
2310	12.5	3.4	1.6	chr11	60530693	60531066	(74555556)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	658505
1861	19.7	9.7	3.0	chr11	60825231	60825594	(74261028)	C	MLT1C	LTR/ERVL-MaLR	(58)	409	3	658949
2890	9.6	0.0	1.3	chr11	61094051	61094441	(73992181)	+	HERVE_a-int	LTR/ERV1	1	386	(7461)	659491
20948	4.7	0.7	1.3	chr11	61094435	61097062	(73989560)	+	HERVE_a-int	LTR/ERV1	263	4184	(4794)	659492
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
19	0.0	0.0	0.0	chr11	64779244	64779264	(70307358)	+	(A)n	Simple_repeat	1	21	(0)	666185
2209	10.3	0.0	0.3	chr11	65040013	65040302	(70046320)	C	AluSz	SINE/Alu	(23)	289	1	666736
17	21.5	3.4	4.9	chr11	65354770	65354828	(69731794)	+	(GC)n	Simple_repeat	1	61	(0)	667385
15	8.2	0.0	3.6	chr11	65354964	65354991	(69731631)	+	(GCGG)n	Simple_repeat	1	28	(0)	667386
2188	14.1	0.0	0.0	chr11	65632740	65633043	(69453579)	C	AluJb	SINE/Alu	(7)	305	2	667873
11	22.6	5.4	3.4	chr11	67118416	67118471	(67968151)	+	(GCCCCCGG)n	Simple_repeat	1	59	(0)	671003
1108	19.8	8.6	1.9	chr11	68024426	68024749	(67061873)	C	L1M2	LINE/L1	(4031)	2818	2471	672639
637	25.8	18.2	0.0	chr11	68024755	68025033	(67061589)	C	L1MD3	LINE/L1	(755)	7127	6776	672638
743	21.4	13.2	0.0	chr11	71187005	71187247	(63899375)	+	HERVL40-int	LTR/ERVL	5277	5498	(32)	677836
500	30.0	13.0	4.5	chr11	72425677	72426074	(62660548)	+	L2c	LINE/L2	2951	3387	(0)	679938
1508	25.2	13.3	4.8	chr11	72491373	72491724	(62594898)	+	L1MDa	LINE/L1	4049	4405	(2132)	680067
51	0.0	0.0	0.0	chr11	72491725	72491768	(62594854)	+	(AC)n	Simple_repeat	1	44	(0)	680076
1508	25.2	13.3	4.8	chr11	72491769	72491920	(62594702)	+	L1MDa	LINE/L1	4406	4557	(1980)	680067
1116	14.2	1.9	5.4	chr11	73181021	73181197	(61905425)	C	L1M4	LINE/L1	(1060)	5086	4912	681339
1231	18.9	0.0	2.8	chr11	73181210	73181426	(61905196)	C	L1M4b	LINE/L1	(6550)	317	107	681341
7370	22.2	9.8	5.0	chr11	73475580	73476982	(61609640)	+	L1MB8	LINE/L1	23	1541	(1115)	681926
293	36.2	0.7	9.0	chr11	76371269	76371423	(58715199)	+	L2b	LINE/L2	3018	3159	(216)	687874
351	29.6	17.6	1.2	chr11	76371540	76371795	(58714827)	+	L2a	LINE/L2	1751	2057	(1362)	687875
645	29.3	2.4	1.0	chr11	78319257	78319463	(56767159)	+	L1ME4c	LINE/L1	256	465	(365)	691802
203	33.0	3.0	3.0	chr11	78947554	78947653	(56138969)	C	MER131	DNA?	(96)	119	20	692958
1450	17.9	3.8	0.4	chr11	86334712	86334940	(48751682)	C	AluJo	SINE/Alu	(75)	237	1	705391
7292	20.3	10.5	2.6	chr11	86334941	86336305	(48750317)	+	L1M4	LINE/L1	81	1592	(5925)	705390
1325	32.1	10.3	5.3	chr11	86510772	86511422	(48575200)	+	L2c	LINE/L2	2359	3043	(376)	705686
10771	13.1	0.8	7.9	chr11	88253699	88254621	(46832001)	+	L1P4	LINE/L1	2150	3054	(3092)	708279
299	29.1	6.5	3.2	chr11	92242496	92242640	(42843982)	C	L2c	LINE/L2	(1)	3374	3221	713884
1100	23.9	4.3	6.9	chr11	92620756	92621115	(42465507)	C	MLT1A0	LTR/ERVL-MaLR	(12)	353	4	714428
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
900	21.5	6.0	5.6	chr11	102177934	102178165	(32908457)	+	MIR	SINE/MIR	5	237	(25)	727516
754	29.5	6.2	0.8	chr11	108432144	108432389	(26654233)	+	MIR	SINE/MIR	3	262	(0)	736808
981	24.1	3.2	0.7	chr11	111551729	111552004	(23534618)	+	L1MC4	LINE/L1	7632	7914	(128)	741526
282	29.0	16.6	5.2	chr11	116986337	116986569	(18100053)	+	L2	LINE/L2	1276	1540	(1879)	750272
529	29.0	17.1	3.7	chr11	119409404	119409704	(15676918)	+	L2a	LINE/L2	1634	2002	(1417)	754819
1293	24.4	7.8	5.5	chr11	119409705	119410181	(15676441)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	67	754821
7691	23.0	6.3	3.0	chr11	121529700	121531111	(13555511)	C	L1ME1	LINE/L1	(4000)	2242	797	758250
7537	19.3	8.4	5.1	chr11	129224386	129224829	(5861793)	+	L1M4	LINE/L1	368	847	(7032)	769994
268	32.7	10.0	5.3	chr11	129960272	129960536	(5126086)	+	MARNA	DNA/TcMar-Mariner	294	572	(14)	771060
2554	21.7	4.4	1.7	chr11	134544206	134544566	(542056)	+	L1MC3	LINE/L1	7161	7545	(240)	777367
59	0.0	0.0	0.0	chr11	134744889	134744938	(341684)	+	(CA)n	Simple_repeat	1	50	(0)	777603
8396	20.6	3.6	3.0	chr11	134767043	134772224	(314398)	+	L1MA4A	LINE/L1	22	7716	(6)	777635
2377	11.6	0.0	0.0	chr12	487432	487741	(132787568)	+	AluSz	SINE/Alu	2	311	(1)	778840
1241	16.4	3.7	2.3	chr12	487753	487966	(132787343)	+	AluJb	SINE/Alu	82	298	(14)	778841
205	32.5	6.4	4.9	chr12	570263	570385	(132704924)	+	L3b	LINE/CR1	5089	5213	(19)	778980
991	24.6	23.1	4.2	chr12	975629	976012	(132299297)	+	L2	LINE/L2	1822	2313	(1106)	779821
15	12.4	2.6	5.0	chr12	1530708	1530746	(131744563)	+	(GCCC)n	Simple_repeat	1	40	(0)	780815
20	21.7	4.3	5.1	chr12	2959652	2959745	(130315564)	+	(TCGCTCC)n	Simple_repeat	1	98	(0)	783022
17	3.4	6.7	0.0	chr12	2959797	2959826	(130315483)	+	(CTCCG)n	Simple_repeat	1	32	(0)	783023
2418	8.3	0.0	1.0	chr12	3005485	3005796	(130269513)	C	AluY	SINE/Alu	(0)	311	3	783123
1742	15.8	0.3	10.0	chr12	3005797	3005937	(130269372)	C	AluJo	SINE/Alu	(187)	125	1	783122
1935	17.2	2.2	6.0	chr12	3005938	3006149	(130269160)	+	L1MA7	LINE/L1	6044	6258	(33)	783121
42	21.9	1.6	3.2	chr12	3077254	3077376	(130197933)	+	(CGCCC)n	Simple_repeat	1	125	(0)	783270
450	27.4	3.1	11.2	chr12	3600006	3600247	(129675062)	+	MIRb	SINE/MIR	41	262	(6)	784091
181	29.0	2.8	2.8	chr12	3600317	3600387	(129674922)	+	MamSINE1	SINE/tRNA-RTE	216	286	(4)	784090
2929	28.4	7.2	3.4	chr12	3893600	3895346	(129379963)	+	L2a	LINE/L2	1598	3426	(0)	784564
335	29.3	7.5	3.7	chr12	4450202	4450392	(128824917)	C	LTR88b	LTR/Gypsy?	(634)	203	5	785556
184	25.8	12.6	5.8	chr12	6961488	6961590	(126313719)	+	MIRb	SINE/MIR	125	235	(33)	789702
619	26.0	0.0	5.2	chr12	6961639	6961792	(126313517)	C	MIR	SINE/MIR	(101)	161	16	789703
624	25.9	3.6	1.6	chr12	9672362	9672449	(123602860)	C	L1MC1	LINE/L1	(108)	6400	6311	794166
9420	15.7	3.7	1.6	chr12	9672446	9674544	(123600765)	C	L1PA10	LINE/L1	(4392)	2091	10	794168
23	26.8	3.2	2.1	chr12	9830084	9830176	(123445133)	+	(GTTTT)n	Simple_repeat	1	96	(0)	794365
405	26.3	13.2	3.4	chr12	9830243	9830808	(123444501)	C	L1MC	LINE/L1	(1821)	4319	3700	794366
6003	21.9	4.3	1.8	chr12	9862601	9864900	(123410409)	+	L1M3f	LINE/L1	1238	3609	(3956)	794407
20271	10.9	3.4	2.3	chr12	11108365	11114661	(122160648)	+	L1PA7	LINE/L1	2	6466	(3)	796081
2018	16.1	1.0	0.3	chr12	12285803	12286107	(120989202)	+	AluJo	SINE/Alu	1	307	(5)	797837
4670	7.3	2.5	4.6	chr12	12639664	12640754	(120634555)	C	MER11A	LTR/ERVK	(0)	1266	1	798490
8079	21.5	4.2	5.2	chr12	15175389	15176145	(118099164)	C	L1MB8	LINE/L1	(6725)	792	18	802443
17	20.8	3.4	3.3	chr12	15789446	15789504	(117485805)	+	(CGAG)n	Simple_repeat	1	61	(0)	803291
310	32.0	10.2	0.7	chr12	16369116	16369266	(116906043)	+	MIRc	SINE/MIR	2	168	(100)	804198
661	31.2	5.2	11.9	chr12	16369347	16369532	(116905777)	C	MLT1H	LTR/ERVL-MaLR	(127)	422	282	804199
282	26.9	21.9	4.5	chr12	21637249	21637427	(111637882)	+	MIRb	SINE/MIR	50	268	(0)	811035
6424	23.3	5.3	2.9	chr12	24001994	24005264	(109270045)	+	L1MB8	LINE/L1	3780	7032	(6)	814318
218	25.8	12.8	5.7	chr12	25377656	25377865	(107897444)	+	L2c	LINE/L2	3049	3275	(112)	816410
5377	18.7	5.1	2.9	chr12	25732727	25734038	(107541271)	C	L1M4b	LINE/L1	(3731)	3136	1794	816900
727	32.5	10.1	0.6	chr12	25982873	25983373	(107291936)	+	L1MEd	LINE/L1	486	1039	(6047)	817327
355	27.3	7.3	3.8	chr12	25983376	25983611	(107291698)	C	MER112	DNA/hAT-Charlie	(16)	245	1	817328
8598	23.7	6.0	1.6	chr12	27477236	27479454	(105795855)	C	L1M2	LINE/L1	(4387)	3179	1411	819615
11890	14.5	3.4	1.8	chr12	28644155	28646629	(104628680)	C	L1PA10	LINE/L1	(4035)	2448	10	821338
262	33.6	5.6	4.0	chr12	29741484	29741607	(103533702)	C	MIR3	SINE/MIR	(64)	144	19	822798
3905	26.0	7.0	2.8	chr12	30620685	30621462	(102653847)	+	MLT1H-int	LTR/ERVL-MaLR	519	1351	(58)	823944
2210	11.4	0.0	0.3	chr12	31365917	31366213	(101909096)	+	AluSx1	SINE/Alu	1	296	(16)	825117
618	14.0	0.0	10.1	chr12	31366251	31366358	(101908951)	+	U6	snRNA	1	99	(8)	825118
2060	14.3	0.0	0.3	chr12	31366359	31366658	(101908651)	C	AluJb	SINE/Alu	(13)	299	1	825119
46	4.1	0.0	0.0	chr12	31636903	31636953	(101638356)	+	(TTGG)n	Simple_repeat	1	51	(0)	825692
2188	9.3	0.7	0.0	chr12	31636954	31637232	(101638077)	C	AluSx1	SINE/Alu	(31)	281	1	825693
12	20.9	0.0	4.8	chr12	31959362	31959403	(101315906)	+	(CTGGTC)n	Simple_repeat	1	42	(0)	826462
17	16.4	0.0	4.4	chr12	31959530	31959574	(101315735)	+	G-rich	Low_complexity	1	45	(0)	826463
26	0.0	0.0	0.0	chr12	32399402	32399426	(100875883)	+	(GGC)n	Simple_repeat	1	25	(0)	827410
2377	10.3	0.7	0.0	chr12	32409277	32409586	(100865723)	C	AluSq2	SINE/Alu	(1)	312	1	827437
18	31.3	0.0	2.7	chr12	42237908	42237981	(91037328)	+	(CGC)n	Simple_repeat	1	74	(0)	836252
605	32.4	17.2	3.1	chr12	42379580	42380213	(90895096)	C	L3	LINE/CR1	(608)	3491	2750	836537
186	27.1	1.8	19.6	chr12	42696987	42697119	(90578190)	+	MIR3	SINE/MIR	37	145	(63)	837074
1222	13.6	1.1	0.5	chr12	43362844	43363028	(89912281)	+	MLT1D	LTR/ERVL-MaLR	263	448	(57)	837999
11275	21.6	6.1	3.8	chr12	43363043	43366902	(89908407)	+	L1M4b	LINE/L1	158	3955	(3051)	837997
10274	19.9	5.3	5.4	chr12	45363979	45365993	(87909316)	C	L1MB7	LINE/L1	(5522)	1995	18	840711
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	17.1	5.4	3.4	chr12	45729238	45729306	(87546003)	+	(CCG)n	Simple_repeat	1	70	(0)	841279
7811	23.1	8.1	2.9	chr12	45767952	45769972	(87505337)	+	L1M4b	LINE/L1	89	2237	(4630)	841351
1125	25.1	3.8	7.1	chr12	46433709	46434059	(86841250)	C	L2a	LINE/L2	(4)	3422	3084	842263
15	11.8	5.1	2.4	chr12	47773453	47773491	(85501818)	+	G-rich	Low_complexity	1	41	(0)	844181
628	27.6	5.2	0.0	chr12	49035947	49036145	(84239164)	+	MIR	SINE/MIR	53	262	(0)	846287
1294	10.9	0.0	0.0	chr12	49036314	49036478	(84238831)	C	AluSx3	SINE/Alu	(14)	297	133	846288
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
2723	13.0	0.0	2.5	chr12	49734452	49734847	(83540462)	+	HERVE_a-int	LTR/ERV1	1	386	(7461)	847709
382	24.6	7.2	6.4	chr12	50151169	50151317	(83123992)	+	L2-3_Crp	LINE/L2	724	876	(1220)	848525
508	2.9	11.7	0.0	chr12	50151318	50151385	(83123924)	+	MADE1	DNA/TcMar-Mariner	1	77	(3)	848526
382	24.6	7.2	6.4	chr12	50151386	50151470	(83123839)	+	L2-3_Crp	LINE/L2	877	960	(1136)	848525
20	18.8	0.0	3.9	chr12	50505002	50505053	(82770256)	+	(GGC)n	Simple_repeat	1	52	(0)	849382
533	16.1	0.0	0.0	chr12	51397992	51398072	(81877237)	C	AluSz	SINE/Alu	(230)	82	2	851283
447	31.4	4.9	2.0	chr12	51950409	51950560	(81324749)	C	MIRb	SINE/MIR	(54)	154	3	852205
12	13.1	4.1	7.8	chr12	52498597	52498645	(80776664)	+	(TCTCCCA)n	Simple_repeat	1	51	(0)	853023
237	35.8	10.8	0.0	chr12	53441353	53441500	(79833809)	+	L2c	LINE/L2	3184	3349	(38)	854770
12	24.1	2.6	0.0	chr12	53441508	53441546	(79833763)	+	(GCCCC)n	Simple_repeat	1	40	(0)	854771
237	30.8	0.0	0.0	chr12	53732185	53732236	(79543073)	C	MIRb	SINE/MIR	(18)	250	199	855358
348	31.2	4.6	5.3	chr12	53732447	53732605	(79542704)	C	MIR	SINE/MIR	(6)	224	70	855358
833	16.7	0.8	0.0	chr12	54489823	54489954	(78785355)	C	FLAM_C	SINE/Alu	(10)	133	1	856532
14	10.4	0.0	0.0	chr12	54489955	54489969	(78785340)	+	(TTTATT)n	Simple_repeat	5	19	(0)	856533
829	6.1	1.0	0.0	chr12	56091412	56091510	(77183799)	C	AluSq	SINE/Alu	(16)	297	198	858901
840	14.4	0.0	0.0	chr12	56091512	56091629	(77183680)	C	AluJb	SINE/Alu	(186)	126	9	858902
1500	22.1	9.8	2.2	chr12	56091640	56091930	(77183379)	C	L1MC4	LINE/L1	(428)	7454	7099	858903
36	19.9	2.1	7.6	chr12	56189476	56189616	(77085693)	+	(GCC)n	Simple_repeat	1	144	(0)	859049
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
12	23.1	3.7	3.6	chr12	56314972	56315025	(76960284)	+	GA-rich	Low_complexity	1	56	(0)	859297
6071	19.1	8.7	6.9	chr12	57882682	57884148	(75391161)	+	L1MEc	LINE/L1	37	1528	(4872)	861987
949	26.9	10.1	2.5	chr12	58186874	58187304	(75088005)	+	MLT1J	LTR/ERVL-MaLR	1	467	(45)	862427
3991	18.4	3.0	2.0	chr12	63978214	63979038	(69296271)	C	L1MB8	LINE/L1	(17)	6161	5329	870287
31	3.1	0.0	0.0	chr12	64404467	64404499	(68870810)	+	(GCG)n	Simple_repeat	1	33	(0)	871076
23	18.1	0.0	0.0	chr12	64404541	64404586	(68870723)	+	(CCTG)n	Simple_repeat	1	46	(0)	871077
2238	11.9	3.0	2.5	chr12	64446899	64447260	(68828049)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	871139
563	25.3	8.5	7.4	chr12	65125747	65126002	(68149307)	+	MER102a	DNA/hAT-Charlie	64	322	(8)	872304
891	28.9	3.9	0.7	chr12	67108122	67108420	(66166889)	C	L1M2	LINE/L1	(6535)	314	6	875412
24420	6.7	0.8	0.2	chr12	67405263	67409669	(65865640)	+	L1PA6	LINE/L1	1728	6141	(13)	875863
341	33.2	7.7	1.3	chr12	67427977	67428208	(65847101)	C	LTR78B	LTR/ERV1	(593)	703	456	875903
188	29.6	0.0	0.0	chr12	67795512	67795555	(65479754)	C	L2a	LINE/L2	(13)	3413	3370	876434
36143	6.3	1.9	0.8	chr12	68540690	68547511	(64727798)	+	Harlequin-int	LTR/ERV1	1	6895	(1)	877578
2561	8.0	0.0	1.9	chr12	68851324	68851636	(64423673)	+	AluSc8	SINE/Alu	1	307	(4)	878230
16	13.3	3.0	0.0	chr12	69240134	69240166	(64035143)	+	(CCG)n	Simple_repeat	1	34	(0)	878961
203	25.8	14.7	3.0	chr12	70648564	70648695	(62626614)	C	MIR3	SINE/MIR	(29)	179	30	881224
878	30.3	14.4	2.3	chr12	76698331	76698815	(56576494)	+	L2a	LINE/L2	2856	3422	(4)	889701
357	33.1	1.1	8.5	chr12	83863505	83863692	(49411617)	C	MIR	SINE/MIR	(5)	257	84	899565
766	24.1	8.0	1.4	chr12	89469314	89469536	(43805773)	C	LTR79	LTR/ERVL	(8)	519	281	907070
237	24.1	13.8	3.0	chr12	89469569	89469735	(43805574)	C	LTR79	LTR/ERVL	(321)	206	19	907070
1856	30.2	7.0	2.4	chr12	90288987	90289651	(42985658)	C	L1MB7	LINE/L1	(6151)	716	19	908309
1856	28.4	4.8	6.3	chr12	93116768	93117104	(40158205)	+	LTR16E2	LTR/ERVL	1	332	(236)	912758
776	22.6	0.0	0.0	chr12	93223234	93223366	(40051943)	C	FLAM_C	SINE/Alu	(10)	133	1	912980
229	33.1	7.2	2.6	chr12	94770722	94770952	(38504357)	+	L2a	LINE/L2	3183	3403	(23)	915804
248	26.2	0.0	1.5	chr12	94771120	94771185	(38504124)	C	L1ME4a	LINE/L1	(4)	6120	6056	915805
1132	28.5	3.4	8.6	chr12	94785482	94785923	(38489386)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	95	915831
58	7.3	3.4	0.0	chr12	95239946	95240021	(38035288)	+	(GA)n	Simple_repeat	1	78	(0)	916806
61	0.0	0.0	0.0	chr12	95240022	95240076	(38035233)	+	(AAGG)n	Simple_repeat	1	55	(0)	916807
58	7.3	3.4	0.0	chr12	95240077	95240087	(38035222)	+	(GA)n	Simple_repeat	1	12	(0)	916808
897	14.7	0.0	0.0	chr12	95248710	95248878	(38026431)	+	FLAM_A	SINE/Alu	4	142	(0)	916827
1372	20.9	6.8	3.7	chr12	95248879	95249205	(38026104)	+	MER58B	DNA/hAT-Charlie	1	338	(3)	916828
1317	27.6	19.8	2.5	chr12	95314216	95314989	(37960320)	C	L2a	LINE/L2	(41)	3385	2373	916956
267	37.3	5.7	1.9	chr12	97798919	97799186	(35476123)	C	L2	LINE/L2	(1217)	2202	1924	921188
947	23.9	1.6	0.0	chr12	98037835	98038022	(35237287)	+	L1MB8	LINE/L1	101	291	(6576)	921562
250	32.4	7.3	7.8	chr12	99751609	99751911	(33523398)	C	L2b	LINE/L2	(1)	3386	3099	924289
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
19	26.1	5.4	0.0	chr12	104064727	104064800	(29210509)	+	(GGC)n	Simple_repeat	1	78	(0)	931798
6577	19.0	3.7	3.6	chr12	104921106	104923080	(28352229)	+	L1M1	LINE/L1	2460	4457	(3105)	933503
13	28.8	0.0	0.0	chr12	104957970	104958015	(28317294)	+	G-rich	Low_complexity	1	46	(0)	933576
22244	9.7	1.9	1.7	chr12	105007557	105013982	(28261327)	C	L1PA7	LINE/L1	(50)	6419	3	933652
263	30.2	10.1	2.9	chr12	106118193	106118366	(27156943)	C	MIRb	SINE/MIR	(70)	198	11	935641
12	14.7	2.3	6.8	chr12	108129401	108129443	(25145866)	+	(GAGCCG)n	Simple_repeat	1	44	(0)	939537
734	30.5	3.5	2.0	chr12	108430227	108430477	(24844832)	+	MIRb	SINE/MIR	6	260	(8)	940279
1639	16.4	4.9	1.1	chr12	108430496	108430770	(24844539)	+	AluJb	SINE/Alu	13	298	(14)	940280
18	17.9	0.0	4.2	chr12	108731549	108731596	(24543713)	+	(CCGCCC)n	Simple_repeat	1	48	(0)	940859
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
997	17.5	3.2	4.5	chr12	110000516	110000737	(23274572)	+	MER20	DNA/hAT-Charlie	1	219	(0)	943786
916	31.4	8.5	11.7	chr12	111304479	111305246	(21970063)	C	MamGypLTR3a	LTR/Gypsy	(2)	979	239	946756
2335	9.5	0.0	0.7	chr12	111495024	111495327	(21779982)	+	AluSq2	SINE/Alu	1	302	(11)	947213
18479	12.4	2.7	3.3	chr12	111495328	111495866	(21779443)	+	L1M1	LINE/L1	3633	4183	(3382)	947206
15	17.2	0.0	0.0	chr12	111842307	111842339	(21432970)	+	(GGCGGA)n	Simple_repeat	1	33	(0)	948010
1908	18.2	9.3	3.6	chr12	111915346	111915851	(21359458)	C	L1MD	LINE/L1	(1314)	4832	4295	948132
4203	15.4	1.1	2.5	chr12	111915853	111916442	(21358867)	C	L1MD	LINE/L1	(2079)	4067	3490	948132
3600	5.9	2.0	0.0	chr12	111952472	111952915	(21322394)	+	MLT2A2	LTR/ERVL	1	453	(0)	948202
17	13.5	0.0	8.3	chr12	112108584	112108631	(21166678)	+	(GCCC)n	Simple_repeat	1	48	(0)	948493
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
2199	26.1	1.4	1.1	chr12	116133569	116134123	(17141186)	+	MLT1G3	LTR/ERVL-MaLR	3	559	(36)	957404
17	10.8	0.0	0.0	chr12	116277869	116277898	(16997411)	+	(GAGG)n	Simple_repeat	1	30	(0)	957624
639	21.3	0.0	0.0	chr12	116442365	116442493	(16832816)	+	FLAM_C	SINE/Alu	1	211	(90)	958061
19	14.8	3.5	5.0	chr12	116737904	116737961	(16537348)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	958801
15	32.4	1.1	3.3	chr12	116819327	116819415	(16455894)	+	(GGCCCGG)n	Simple_repeat	1	90	(0)	959020
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
7191	20.4	2.4	3.0	chr12	116943037	116944322	(16330987)	C	L1M4	LINE/L1	(6192)	1325	20	959323
16	0.0	0.0	0.0	chr12	118033548	118033564	(15241745)	+	(A)n	Simple_repeat	1	17	(0)	961675
2387	8.2	0.0	0.0	chr12	119776973	119777263	(13498046)	+	AluSx	SINE/Alu	1	291	(21)	965477
13	14.0	4.7	4.4	chr12	120091574	120091616	(13183693)	+	G-rich	Low_complexity	1	45	(0)	966214
25	18.9	4.3	5.2	chr12	120469569	120469661	(12805648)	+	(CCG)n	Simple_repeat	1	97	(0)	967152
244	29.9	9.9	1.9	chr12	120529536	120529692	(12745617)	C	MER5A	DNA/hAT-Charlie	(15)	174	4	967310
417	28.9	11.8	2.5	chr12	120535127	120535325	(12739984)	C	MIR	SINE/MIR	(40)	222	3	967328
748	26.2	2.3	6.2	chr12	120647210	120647386	(12627923)	C	MIRb	SINE/MIR	(24)	244	73	967589
1902	10.9	5.0	0.3	chr12	121399078	121399360	(11875949)	+	AluSq2	SINE/Alu	1	297	(16)	969319
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
880	15.3	1.5	0.0	chr12	122010969	122011099	(11264210)	+	AluJr4	SINE/Alu	1	133	(179)	970889
2026	13.2	2.7	0.0	chr12	122195254	122195540	(11079769)	C	AluSx1	SINE/Alu	(17)	295	1	971297
3087	17.2	2.4	9.2	chr12	122195541	122195876	(11079433)	C	L1M4b	LINE/L1	(4695)	2172	1836	971294
18	18.8	6.5	1.5	chr12	122500541	122500611	(10774698)	+	(CGCCCT)n	Simple_repeat	1	74	(0)	972003
14	12.5	0.0	0.0	chr12	122500719	122500744	(10774565)	+	(TCG)n	Simple_repeat	1	26	(0)	972004
286	36.1	1.4	2.7	chr12	123396531	123396678	(9878631)	+	MIRc	SINE/MIR	89	234	(34)	973968
644	27.4	2.7	3.2	chr12	123396857	123397041	(9878268)	+	MIR	SINE/MIR	69	252	(10)	973969
15	32.2	0.0	1.6	chr12	123712361	123712423	(9562886)	+	(GCG)n	Simple_repeat	1	63	(0)	974781
4005	10.8	2.8	0.0	chr12	123828282	123828844	(9446465)	C	LTR19B	LTR/ERV1	(1)	579	1	975022
695	33.8	11.0	2.1	chr12	124866287	124866709	(8408600)	+	L2b	LINE/L2	2911	3375	(0)	977003
679	1.4	0.0	0.0	chr12	124927842	124927915	(8347394)	C	tRNA-Phe-TTY	tRNA	(2)	74	1	977166
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
20	35.9	1.0	1.0	chr12	132711086	132711182	(564127)	+	G-rich	Low_complexity	1	98	(0)	989825
455	21.5	0.0	0.0	chr12	132992625	132992703	(282606)	+	Tigger5b	DNA/TcMar-Tigger	391	469	(3)	990310
391	23.1	1.3	0.0	chr12	132992704	132992780	(282529)	C	Tigger5	DNA/TcMar-Tigger	(2328)	78	1	990311
2883	18.9	11.5	3.0	chr12	132992783	132993023	(282286)	C	L1MCa	LINE/L1	(5228)	1280	978	990300
2228	11.9	0.7	0.0	chr13	20419288	20419589	(93944739)	C	AluSp	SINE/Alu	(7)	306	3	994222
601	29.9	7.0	4.0	chr13	21556016	21556523	(92807805)	+	L2	LINE/L2	2191	2355	(1064)	996322
2168	21.1	1.9	10.2	chr13	22951504	22952184	(91412144)	C	MER4D	LTR/ERV1	(135)	768	20	998131
2043	16.8	5.0	2.3	chr13	22952186	22952617	(91411711)	+	L1MB8	LINE/L1	2064	2507	(4360)	998130
333	21.1	20.2	0.0	chr13	23575645	23575739	(90788589)	C	L2a	LINE/L2	(4)	3422	3304	999053
996	22.5	15.2	1.3	chr13	23890191	23890581	(90473747)	+	MLT1C	LTR/ERVL-MaLR	6	460	(7)	999488
2263	16.1	9.9	2.5	chr13	24201739	24202038	(90162290)	C	L1MC2	LINE/L1	(223)	6121	5820	999953
233	30.4	14.4	5.8	chr13	24872543	24872713	(89491615)	C	L2c	LINE/L2	(20)	3367	3180	1000934
230	13.5	0.0	0.0	chr13	24872768	24872804	(89491524)	+	L1MA4A	LINE/L1	6173	6209	(94)	1000935
12263	16.1	4.2	1.0	chr13	26002896	26005683	(88358645)	C	L1MA8	LINE/L1	(498)	5793	2903	1002572
2054	24.1	5.1	2.9	chr13	26136787	26137307	(88227021)	+	L1M4	LINE/L1	28	560	(6957)	1002774
1091	21.7	5.7	6.2	chr13	26592355	26592727	(87771601)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	4	1003516
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
1721	23.7	3.3	1.6	chr13	28829001	28829244	(85535084)	+	L1MB7	LINE/L1	23	265	(7252)	1007393
2065	13.6	0.0	2.0	chr13	28829245	28829545	(85534783)	+	AluSx	SINE/Alu	2	296	(16)	1007394
18	27.4	1.3	4.0	chr13	30464650	30464724	(83899604)	+	(CCG)n	Simple_repeat	1	76	(0)	1009735
31	0.0	0.0	0.0	chr13	30464762	30464788	(83899540)	+	(TG)n	Simple_repeat	1	27	(0)	1009736
981	27.0	7.6	4.0	chr13	30581267	30581361	(83782967)	C	L4_B_Mam	LINE/RTE-X	(615)	4326	4225	1009996
980	25.8	2.7	0.0	chr13	30581362	30581578	(83782750)	+	MER58A	DNA/hAT-Charlie	2	224	(0)	1009997
24	23.2	5.3	2.0	chr13	31199925	31200018	(83164310)	+	(GGC)n	Simple_repeat	1	99	(0)	1011022
2064	13.2	1.3	0.3	chr13	31362038	31362340	(83001988)	+	AluSq	SINE/Alu	1	306	(7)	1011197
1204	8.9	0.0	1.7	chr13	31362573	31362744	(83001584)	+	LOR1-int	LTR/ERV1	7768	7936	(184)	1011196
1170	16.7	14.9	0.4	chr13	31982423	31982698	(82381630)	C	MER33	DNA/hAT-Charlie	(1)	323	1	1012111
460	30.5	6.4	7.8	chr13	31982699	31982791	(82381537)	+	L2c	LINE/L2	3281	3370	(17)	1012110
370	27.5	2.7	4.0	chr13	31982851	31982998	(82381330)	+	LTR81A	LTR/Gypsy	28	173	(1177)	1012112
14	14.3	0.0	3.0	chr13	32427549	32427581	(81936747)	+	G-rich	Low_complexity	1	33	(0)	1012748
448	28.8	5.9	5.1	chr13	34225531	34225859	(80138469)	+	MLT1H	LTR/ERVL-MaLR	118	486	(63)	1015492
739	25.6	7.4	4.0	chr13	34435114	34435361	(79928967)	C	MIR	SINE/MIR	(0)	262	6	1015775
562	34.2	5.8	2.0	chr13	34955318	34955618	(79408710)	C	L2c	LINE/L2	(53)	3334	3022	1016550
7009	20.0	6.8	1.9	chr13	35189784	35191360	(79172968)	+	L1M4	LINE/L1	62	1720	(5797)	1016878
316	21.4	0.0	0.0	chr13	35495487	35495542	(78868786)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	417	1017193
438	20.6	0.0	0.0	chr13	35495555	35495627	(78868701)	C	Tigger5	DNA/TcMar-Tigger	(2333)	73	1	1017194
1131	10.2	7.5	0.0	chr13	35495629	35495824	(78868504)	+	L1M4	LINE/L1	2600	2811	(3335)	1017195
2260	10.5	1.0	0.0	chr13	36373811	36374096	(77990232)	C	AluSc	SINE/Alu	(19)	290	2	1018465
965	27.5	11.0	5.2	chr13	36504247	36504927	(77859401)	C	MER21C	LTR/ERVL	(96)	842	38	1018620
2306	9.5	0.0	0.3	chr13	36926831	36927124	(77437204)	+	AluYm1	SINE/Alu	1	293	(18)	1019285
14442	13.3	1.7	4.3	chr13	37157956	37161058	(77203270)	C	L1PA16	LINE/L1	(1446)	5403	2380	1019643
411	37.9	2.9	3.2	chr13	37367545	37367909	(76996419)	+	L2c	LINE/L2	2800	3159	(228)	1019914
906	28.5	11.4	4.7	chr13	38122582	38123336	(76240992)	C	HAL1	LINE/L1	(377)	2130	1380	1020840
4485	28.0	3.3	4.8	chr13	38239924	38241564	(76122764)	+	L1MB7	LINE/L1	20	1635	(5882)	1021000
454	32.9	3.6	3.6	chr13	38399757	38399923	(75964405)	C	MLT1J	LTR/ERVL-MaLR	(113)	399	233	1021198
3841	13.3	2.2	13.5	chr13	41148180	41148942	(73215386)	+	LTR76	LTR/ERV1	1	675	(0)	1025343
1234	20.0	0.0	0.5	chr13	41555411	41555626	(72808702)	+	L1MB7	LINE/L1	1	215	(7302)	1026025
6819	13.4	2.2	0.6	chr13	41555622	41556746	(72807582)	+	L1MB7	LINE/L1	4759	5899	(745)	1026025
16	31.1	0.0	0.0	chr13	42048809	42048863	(72315465)	+	(CGC)n	Simple_repeat	1	55	(0)	1026762
503	25.7	9.8	0.0	chr13	42275682	42275829	(72088499)	+	MIR	SINE/MIR	77	240	(22)	1027118
5181	12.3	5.0	1.5	chr13	43176666	43177536	(71186792)	C	HSMAR2	DNA/TcMar-Mariner	(2)	1300	398	1028520
1087	12.3	2.2	0.0	chr13	43177530	43177708	(71186620)	C	HSMAR2	DNA/TcMar-Mariner	(1119)	183	1	1028520
14	17.3	5.1	0.0	chr13	44576822	44576860	(69787468)	+	(GCAGCG)n	Simple_repeat	1	41	(0)	1030516
2108	17.4	2.2	0.5	chr13	44832169	44832577	(69531751)	+	L1MB8	LINE/L1	5751	6166	(12)	1031039
1980	18.0	0.0	1.0	chr13	45146214	45146518	(69217810)	+	AluJr	SINE/Alu	1	302	(10)	1031689
308	22.7	26.5	0.0	chr13	46120032	46120203	(68244125)	+	MIRb	SINE/MIR	20	253	(15)	1033383
5604	6.5	3.8	0.3	chr13	46392055	46392807	(67971521)	+	MER4E1	LTR/ERV1	1	781	(0)	1033823
3637	9.1	8.1	0.3	chr13	46671757	46672328	(67692000)	C	L1MC1	LINE/L1	(9)	6324	5705	1034281
20	22.2	7.1	1.1	chr13	48233248	48233332	(66130996)	+	(GCAGCCC)n	Simple_repeat	1	91	(0)	1036515
14796	9.8	7.2	4.6	chr13	49877071	49878126	(64486202)	+	LOR1-int	LTR/ERV1	1343	2395	(5725)	1039242
2880	9.7	0.8	0.3	chr13	49921050	49921422	(64442906)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1039323
443	28.6	2.3	0.8	chr13	50084838	50084964	(64279364)	C	MIRb	SINE/MIR	(1)	267	139	1039602
14	5.0	0.0	0.0	chr13	50125825	50125845	(64238483)	+	(GGC)n	Simple_repeat	1	21	(0)	1039668
12	23.1	3.7	3.6	chr13	50125846	50125875	(64238453)	+	(CGCGGC)n	Simple_repeat	4	56	(0)	1039669
8888	19.4	5.4	3.0	chr13	50538155	50540115	(63824213)	C	L1MB7	LINE/L1	(5507)	2010	3	1040261
13	8.5	0.0	3.7	chr13	51222574	51222600	(63141728)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1041255
12	22.8	4.2	2.0	chr13	51452232	51452279	(62912049)	+	(GCCC)n	Simple_repeat	1	50	(0)	1041599
11	24.1	0.0	0.0	chr13	51453641	51453674	(62910654)	+	G-rich	Low_complexity	1	34	(0)	1041604
22830	7.2	0.7	0.3	chr13	51482264	51486400	(62877928)	C	L1PA7	LINE/L1	(11)	6143	2006	1041658
257	22.0	0.0	0.0	chr13	51522299	51522357	(62841971)	C	L1MC5a	LINE/L1	(2092)	685	627	1041719
247	21.1	0.0	4.0	chr13	51522353	51522426	(62841902)	C	L1MB8	LINE/L1	(1)	6177	6107	1041720
1491	23.4	8.0	15.5	chr13	52067292	52067676	(62296652)	+	MER61E	LTR/ERV1	1	462	(382)	1042511
5546	13.4	15.6	1.3	chr13	52309593	52310674	(62053654)	C	MER11A	LTR/ERVK	(0)	1266	1	1042894
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
1443	24.8	11.7	3.3	chr13	59995606	59996176	(54368152)	C	L2a	LINE/L2	(830)	2589	1965	1052842
4285	20.3	0.7	2.2	chr13	64074922	64075752	(50288576)	C	MER52A	LTR/ERV1	(0)	1755	937	1058100
2159	15.1	0.8	1.3	chr13	64091272	64091648	(50272680)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1058120
7954	24.2	8.1	5.2	chr13	67893856	67898018	(46466310)	+	L1MB3	LINE/L1	11	4363	(2643)	1062843
6141	23.3	3.2	4.2	chr13	70639748	70641721	(43722607)	+	L1M4b	LINE/L1	1258	3211	(3656)	1066400
396	27.1	5.4	8.6	chr13	73870102	73870311	(40494017)	C	L3	LINE/CR1	(2169)	1930	1728	1071202
1373	15.4	8.2	0.4	chr13	74079131	74079411	(40284917)	+	L1MB3	LINE/L1	5877	6181	(2)	1071468
1105	22.6	0.0	1.0	chr13	74140241	74140444	(40223884)	+	AluJr	SINE/Alu	1	202	(110)	1071563
1159	25.4	6.8	0.7	chr13	74758658	74759109	(39605219)	+	HAL1ME	LINE/L1	1196	1677	(788)	1072377
833	30.0	1.9	1.6	chr13	74759236	74759389	(39604939)	C	MLT1J2-int	LTR/ERVL-MaLR	(453)	934	779	1072380
230	19.4	3.1	11.4	chr13	75437801	75437870	(38926458)	C	MER135	DNA	(15)	213	150	1073325
20	16.2	0.0	2.3	chr13	75549747	75549789	(38814539)	+	(GGC)n	Simple_repeat	1	43	(0)	1073544
3623	24.4	2.5	2.5	chr13	75755795	75756936	(38607392)	+	MLT1F-int	LTR/ERVL-MaLR	289	1484	(5)	1073847
1089	31.6	7.4	3.3	chr13	75894964	75895483	(38468845)	+	MLT1H1	LTR/ERVL-MaLR	1	543	(12)	1074018
944	23.0	2.7	2.8	chr13	75895490	75895881	(38468447)	+	L1ME2	LINE/L1	5727	5995	(178)	1074017
1206	23.8	2.7	3.0	chr13	76543012	76543306	(37821022)	+	L1M4b	LINE/L1	11	304	(6563)	1074881
2302	28.7	6.5	2.5	chr13	77196086	77196906	(37167422)	C	L2a	LINE/L2	(298)	3128	2274	1075829
424	30.4	6.3	4.0	chr13	77196922	77197247	(37167081)	C	L2-3_Crp	LINE/L2	(1056)	1040	707	1075830
203	32.1	3.5	2.3	chr13	77509228	77509313	(36855015)	+	L2a	LINE/L2	3316	3402	(24)	1076319
3392	16.1	4.8	1.9	chr13	78802921	78803288	(35561040)	C	L1MC5	LINE/L1	(1082)	6480	6094	1078057
2226	15.5	10.8	9.4	chr13	79487146	79487738	(34876590)	C	L1ME2z	LINE/L1	(384)	6060	5459	1079015
19759	13.5	4.0	2.6	chr13	79560396	79566666	(34797662)	+	L1PA12	LINE/L1	1	6353	(0)	1079133
4873	23.6	6.0	3.1	chr13	88240695	88240986	(26123342)	C	L1M4	LINE/L1	(7202)	315	6	1090069
2345	7.0	2.7	0.0	chr13	93449547	93449833	(20914495)	+	AluSq	SINE/Alu	1	295	(18)	1096920
1000	7.0	0.0	3.1	chr13	93449957	93450085	(20914243)	C	AluSc	SINE/Alu	(184)	125	1	1096921
3771	19.7	8.1	6.4	chr13	94506233	94507349	(19856979)	+	L1MC4a	LINE/L1	6739	7876	(6)	1098427
370	29.8	7.6	2.3	chr13	95258076	95258250	(19106078)	+	L2	LINE/L2	2654	2838	(581)	1099647
565	31.5	5.1	3.6	chr13	96429062	96429301	(17935027)	+	L3b	LINE/CR1	4830	5073	(159)	1101607
491	26.6	4.5	2.9	chr13	96680854	96681027	(17683301)	+	MIRb	SINE/MIR	4	180	(88)	1101940
1150	26.9	7.3	3.9	chr13	96723059	96723549	(17640779)	+	MLT1J	LTR/ERVL-MaLR	2	510	(2)	1102000
1483	20.7	8.6	0.6	chr13	96960418	96960738	(17403590)	+	MLT1A0	LTR/ERVL-MaLR	1	349	(16)	1102307
1538	26.7	5.6	3.1	chr13	97586270	97586787	(16777541)	+	MLT1H	LTR/ERVL-MaLR	18	549	(0)	1103224
1811	22.9	1.1	1.4	chr13	98075078	98075444	(16288884)	C	L1M4	LINE/L1	(7135)	382	17	1104025
14	10.8	6.5	0.0	chr13	98119423	98119453	(16244875)	+	(TTCT)n	Simple_repeat	1	33	(0)	1104118
886	12.6	0.0	0.0	chr13	98119468	98119586	(16244742)	+	AluSx	SINE/Alu	15	133	(179)	1104119
17	10.8	7.5	0.0	chr13	98142939	98142978	(16221350)	+	(CGGAG)n	Simple_repeat	1	43	(0)	1104174
15	19.9	4.8	4.5	chr13	98143122	98143184	(16221144)	+	(GGCGG)n	Simple_repeat	1	66	(0)	1104175
2033	23.4	4.2	0.4	chr13	98441276	98441807	(15922521)	C	MER39	LTR/ERV1	(27)	680	128	1104665
292	34.6	2.7	0.0	chr13	98507461	98507567	(15856761)	+	MIR3	SINE/MIR	98	207	(1)	1104738
2165	10.3	0.0	2.0	chr13	98517344	98517644	(15846684)	+	AluSx1	SINE/Alu	1	295	(17)	1104750
359	33.3	0.0	0.0	chr13	99308759	99308860	(15055468)	+	MIR3	SINE/MIR	96	197	(11)	1106062
14	21.8	6.8	3.8	chr13	99606673	99606758	(14757570)	+	(GGC)n	Simple_repeat	1	88	(0)	1106538
4527	18.1	11.6	1.2	chr13	99610200	99611340	(14752988)	C	L1M4	LINE/L1	(6268)	1249	1	1106543
306	27.6	4.6	10.2	chr13	99758937	99759142	(14605186)	+	MER91A	DNA/hAT-Tip100	1	194	(2)	1106789
21	24.0	4.0	1.3	chr13	99981545	99981619	(14382709)	+	(GCGCGT)n	Simple_repeat	1	78	(0)	1107135
16	31.2	2.9	1.4	chr13	99981581	99981649	(14382679)	+	(GC)n	Simple_repeat	1	71	(0)	1107136
14	14.2	0.0	5.7	chr13	99981891	99981925	(14382403)	+	(GGC)n	Simple_repeat	1	35	(0)	1107140
14	12.7	0.0	0.0	chr13	99982137	99982162	(14382166)	+	(GCG)n	Simple_repeat	1	26	(0)	1107141
364	11.9	5.6	0.0	chr13	102096349	102096415	(12267913)	+	MER94	DNA/hAT-Blackjack	4	74	(60)	1110284
414	37.5	1.4	1.4	chr13	102096497	102096715	(12267613)	C	MIRb	SINE/MIR	(11)	257	39	1110285
2200	27.6	7.5	2.7	chr13	102715045	102715827	(11648501)	+	L1MC5a	LINE/L1	1602	2425	(352)	1111173
1334	18.8	5.5	2.6	chr13	106306785	106307255	(8057073)	C	MER51A	LTR/ERV1	(0)	640	1	1115907
306	32.1	4.2	9.8	chr13	109490428	109490703	(4873625)	C	L1M2	LINE/L1	(1077)	5066	4807	1120113
226	30.2	5.5	6.1	chr13	109490920	109491212	(4873116)	C	L1M5	LINE/L1	(2172)	3974	3684	1120114
17	18.8	5.4	1.7	chr13	110705974	110706029	(3658299)	+	(CCGCCCG)n	Simple_repeat	1	59	(0)	1121626
1256	33.8	4.1	3.9	chr13	112097563	112098264	(2266064)	+	UCON84	Unknown	1	704	(23)	1123172
240	34.2	6.4	4.4	chr13	112213488	112213716	(2150612)	C	UCON66	Unknown	(83)	482	249	1123285
1378	21.6	7.2	6.3	chr13	112416588	112416804	(1947524)	C	L1MC4	LINE/L1	(4221)	1994	1781	1123467
34	0.0	0.0	0.0	chr13	112416805	112416833	(1947495)	+	(TG)n	Simple_repeat	1	29	(0)	1123474
1378	23.7	11.1	4.7	chr13	112416834	112417406	(1946922)	C	L1MC4	LINE/L1	(1264)	1795	1091	1123467
326	35.6	13.2	3.3	chr13	112849679	112849861	(1514467)	C	L2c	LINE/L2	(0)	3387	3172	1123991
2325	10.7	6.6	0.8	chr13	113157676	113158034	(1206294)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1124259
556	25.8	5.6	0.0	chr13	113158054	113158204	(1206124)	+	MER58A	DNA/hAT-Charlie	8	167	(57)	1124260
12	15.8	2.6	5.0	chr13	113394174	113394212	(970116)	+	(GGCGG)n	Simple_repeat	1	40	(0)	1124636
6769	18.1	7.2	2.3	chr13	113642030	113644024	(720304)	+	L1MB3	LINE/L1	498	4136	(2240)	1124930
2592	26.9	6.6	3.9	chr13	114046748	114047654	(316674)	+	L1M5	LINE/L1	4802	5745	(434)	1125209
4848	23.1	2.7	6.0	chr14	21706129	21707481	(85336237)	C	L1M4	LINE/L1	(1350)	1804	92	1130271
2151	12.6	0.3	0.0	chr14	21707482	21707767	(85335951)	C	AluSz	SINE/Alu	(25)	287	1	1130272
626	23.9	8.5	0.5	chr14	24320314	24320498	(82723220)	C	L4_A_Mam	LINE/RTE-X	(92)	4898	4698	1134067
324	28.1	11.8	6.8	chr14	24320567	24320707	(82723011)	C	L4_B_Mam	LINE/RTE-X	(440)	4501	4353	1134068
10634	20.9	5.0	2.4	chr14	29471669	29474217	(77569501)	C	L1MB7	LINE/L1	(4895)	2622	5	1140523
769	34.9	14.1	3.9	chr14	35253697	35254372	(71789346)	+	L2c	LINE/L2	2043	2827	(592)	1149652
19	4.3	0.0	0.0	chr14	36664180	36664203	(70379515)	+	(TC)n	Simple_repeat	1	24	(0)	1151896
16	15.5	2.8	0.0	chr14	36664204	36664215	(70379503)	+	(TCTTTC)n	Simple_repeat	1	37	(0)	1151897
2980	18.5	7.8	1.8	chr14	45142012	45142301	(61901417)	C	L1MC4a	LINE/L1	(0)	7882	7577	1162725
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
959	26.3	10.4	3.6	chr14	51123361	51123699	(55920019)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	190	1171002
10635	15.5	5.7	2.9	chr14	52445987	52450532	(54593186)	+	L1MA3	LINE/L1	14	5000	(2565)	1172958
188	36.0	3.3	2.2	chr14	52922666	52922756	(54120962)	+	MamRTE1	LINE/RTE-BovB	3664	3755	(57)	1173780
721	26.1	7.2	5.0	chr14	52922766	52922849	(54120869)	+	MER58B	DNA/hAT-Charlie	3	86	(255)	1173781
1811	16.2	4.0	0.3	chr14	52922850	52923184	(54120534)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	1173782
477	28.2	6.5	3.3	chr14	53153984	53154163	(53889555)	+	MIR3	SINE/MIR	12	197	(11)	1174115
285	31.5	3.8	3.0	chr14	54598140	54598270	(52445448)	C	MIR	SINE/MIR	(130)	132	1	1176202
26	27.3	2.4	0.0	chr14	56849477	56849558	(50194160)	+	(TCTTCC)n	Simple_repeat	1	84	(0)	1179832
3075	26.4	9.9	6.2	chr14	56849768	56850343	(50193375)	C	L2	LINE/L2	(1040)	2379	1800	1179833
22088	9.3	2.7	0.8	chr14	58923598	58929038	(48114680)	+	L1PA10	LINE/L1	3	5550	(781)	1183006
11925	19.0	4.6	3.2	chr14	60955683	60957261	(46086457)	C	L1M1	LINE/L1	(2657)	4905	3252	1185802
16	4.5	0.0	0.0	chr14	61090497	61090519	(45953199)	+	(AGTG)n	Simple_repeat	1	23	(0)	1185983
4644	21.3	2.1	1.7	chr14	63563389	63563955	(43479763)	+	L1M4	LINE/L1	1	567	(6950)	1189485
2279	8.5	3.0	0.0	chr14	64696967	64697260	(42346458)	C	AluSg7	SINE/Alu	(4)	305	3	1191786
750	28.1	1.8	2.7	chr14	64697362	64697584	(42346134)	+	MIRb	SINE/MIR	13	233	(35)	1191787
2334	13.4	11.0	0.8	chr14	65991947	65992330	(41051388)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1194002
1596	8.8	0.0	0.0	chr14	66904617	66904831	(40138887)	C	HERV9-int	LTR/ERV1	(0)	8436	8222	1195178
2841	17.4	2.3	0.6	chr14	66904833	66905574	(40138144)	C	L1MA4	LINE/L1	(4824)	2741	1989	1195176
192	32.2	20.4	0.0	chr14	68706300	68706420	(38337298)	C	MIR1_Amn	SINE/MIR	(20)	210	59	1198110
12	8.9	10.5	2.4	chr14	69038427	69038464	(38005254)	+	G-rich	Low_complexity	1	42	(0)	1198760
243	32.3	8.0	3.8	chr14	69038576	69038707	(38005011)	C	L3	LINE/CR1	(34)	4065	3928	1198761
483	32.9	4.7	6.2	chr14	69716324	69716582	(37327136)	C	MIR	SINE/MIR	(8)	260	6	1200063
2931	22.9	8.7	5.7	chr14	70356711	70357549	(36686169)	+	L1M4	LINE/L1	1	866	(6651)	1201062
5226	20.4	6.3	1.4	chr14	72758138	72759383	(34284335)	+	L1ME1	LINE/L1	11	1321	(5079)	1204765
272	28.0	2.1	2.1	chr14	74362726	74362820	(32680898)	+	MER5A	DNA/hAT-Charlie	8	102	(87)	1208362
14	20.1	2.0	4.0	chr14	76956446	76956494	(30087224)	+	(CCCCT)n	Simple_repeat	1	50	(0)	1213290
2344	9.6	2.0	0.9	chr14	88786545	88786892	(18256826)	+	THE1A	LTR/ERVL-MaLR	1	352	(3)	1230957
668	27.8	10.9	2.4	chr14	88786893	88787065	(18256653)	C	L2	LINE/L2	(1331)	2088	1889	1230956
246	37.3	5.3	3.4	chr14	88787060	88787206	(18256512)	+	L2c	LINE/L2	3001	3150	(237)	1230958
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
2841	7.6	1.3	1.1	chr14	90526547	90526919	(16516799)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	1234097
2584	21.7	2.5	1.1	chr14	90526920	90527331	(16516387)	C	L1MD3	LINE/L1	(221)	7774	7354	1234096
3303	20.8	4.0	6.9	chr14	90713415	90713945	(16329773)	+	L1ME1	LINE/L1	5373	5894	(285)	1234326
2360	8.5	0.3	0.3	chr14	92133138	92133431	(14910287)	+	AluSp	SINE/Alu	1	294	(19)	1236947
1650	18.4	2.6	2.3	chr14	92133456	92133765	(14909953)	C	AluJb	SINE/Alu	(1)	311	1	1236948
15	4.5	4.0	3.9	chr14	92323594	92323618	(14720100)	+	(GC)n	Simple_repeat	1	26	(0)	1237344
5039	21.0	1.6	1.4	chr14	92480839	92481854	(14561864)	C	L1MB7	LINE/L1	(6493)	1024	7	1237633
381	32.3	11.1	0.0	chr14	92832522	92832682	(14211036)	C	MIRb	SINE/MIR	(73)	195	15	1238325
4597	26.1	8.9	5.3	chr14	93517947	93521730	(13521988)	C	L1MEc	LINE/L1	(2319)	4000	44	1239599
568	24.6	13.1	10.7	chr14	93802561	93803057	(13240661)	+	MLT1H	LTR/ERVL-MaLR	39	549	(0)	1240034
522	13.5	0.1	0.1	chr14	94929374	94929461	(12114257)	C	MSTA	LTR/ERVL-MaLR	(337)	89	1	1242140
236	28.6	9.0	1.1	chr14	94929487	94929578	(12114140)	C	L2a	LINE/L2	(1)	3425	3326	1242141
434	26.1	8.4	4.4	chr14	95219541	95219700	(11824018)	C	MIRb	SINE/MIR	(73)	195	29	1242611
225	29.5	3.9	1.6	chr14	95291821	95291944	(11751774)	+	L1ME4a	LINE/L1	5787	5913	(211)	1242733
481	30.3	3.9	2.8	chr14	95291965	95292144	(11751574)	C	MIR	SINE/MIR	(3)	259	78	1242734
1569	26.1	7.6	1.0	chr14	95634906	95635623	(11408095)	+	L2a	LINE/L2	2647	3426	(0)	1243413
784	31.4	12.5	3.6	chr14	99548811	99549215	(7494503)	+	L1ME3Cz	LINE/L1	575	988	(9)	1250181
244	30.2	12.1	0.8	chr14	99549481	99549597	(7494121)	+	MIR3	SINE/MIR	44	175	(33)	1250187
16	14.5	0.0	6.8	chr14	99793425	99793468	(7250250)	+	(GCGGC)n	Simple_repeat	1	44	(0)	1250642
30	23.9	2.7	3.5	chr14	99793550	99793659	(7250059)	+	(GGC)n	Simple_repeat	1	113	(0)	1250643
633	29.8	1.8	0.5	chr14	100011873	100012088	(7031630)	C	MIRc	SINE/MIR	(19)	249	31	1251013
15	24.6	3.4	1.6	chr14	100306149	100306207	(6737511)	+	(CCCGC)n	Simple_repeat	1	61	(0)	1251630
2414	11.9	1.7	2.7	chr14	102074282	102074659	(4969059)	C	L1MB3	LINE/L1	(41)	6142	5758	1254169
1012	13.5	2.3	2.3	chr14	102074660	102074833	(4968885)	C	L1M4	LINE/L1	(525)	5653	5480	1254171
1876	14.8	2.5	0.0	chr14	102151383	102151688	(4892030)	C	AluJo	SINE/Alu	(0)	312	1	1254351
22	22.7	0.0	1.7	chr14	102319768	102319825	(4723893)	+	(GGC)n	Simple_repeat	1	58	(0)	1254667
15	13.9	0.0	0.0	chr14	102373185	102373208	(4670510)	+	(T)n	Simple_repeat	1	24	(0)	1254792
2278	13.1	1.6	0.0	chr14	102373257	102373616	(4670102)	+	MER47A	DNA/TcMar-Tigger	1	366	(0)	1254793
3699	17.4	4.7	7.1	chr14	103026886	103027841	(4015877)	+	L1MB7	LINE/L1	5195	6128	(56)	1256056
14	20.8	0.0	0.0	chr14	103385584	103385616	(3658102)	+	(CTC)n	Simple_repeat	1	33	(0)	1256713
387	21.6	5.7	3.3	chr14	103607157	103607276	(3436442)	+	MLT1C	LTR/ERVL-MaLR	338	460	(7)	1257143
23	27.9	0.0	2.5	chr14	103715302	103715382	(3328336)	+	(CCCGCC)n	Simple_repeat	1	81	(0)	1257364
267	23.3	6.2	0.0	chr14	103847851	103847940	(3195778)	C	MIR1_Amn	SINE/MIR	(91)	139	44	1257633
2423	3.9	0.0	0.3	chr14	104270841	104271123	(2772595)	+	AluYf1	SINE/Alu	1	282	(29)	1258249
27	0.0	6.1	0.0	chr14	104271124	104271156	(2772562)	+	(AAAAC)n	Simple_repeat	1	35	(0)	1258250
5819	21.1	3.5	2.0	chr14	104271157	104272885	(2770833)	C	L1MC3	LINE/L1	(1760)	6025	4261	1258246
30	3.1	0.0	0.0	chr14	104342231	104342263	(2701455)	+	(GGGGC)n	Simple_repeat	1	33	(0)	1258326
3038	19.7	1.3	9.2	chr14	104488546	104489369	(2554349)	C	MER4D	LTR/ERV1	(0)	903	21	1258468
14022	21.9	7.3	4.1	chr14	104489389	104490228	(2553490)	+	L1MB8	LINE/L1	2593	3468	(48)	1258467
216	14.6	7.8	0.0	chr14	104795935	104796005	(2247713)	+	MIR1_Amn	SINE/MIR	64	148	(82)	1258820
23	19.9	0.0	3.3	chr14	104826530	104826590	(2217128)	+	(CCCGCGC)n	Simple_repeat	1	61	(0)	1258876
3784	22.2	8.1	7.9	chr14	105132196	105133141	(1910577)	+	LOR1-int	LTR/ERV1	1585	2917	(3722)	1259313
476	16.0	1.3	0.0	chr14	105133142	105133216	(1910502)	C	AluJb	SINE/Alu	(5)	307	232	1259318
691	23.2	0.8	0.0	chr14	105133224	105133234	(1910484)	C	FLAM_C	SINE/Alu	(15)	128	118	1259319
40	0.0	0.0	0.0	chr14	105133235	105133268	(1910450)	+	(TG)n	Simple_repeat	1	34	(0)	1259320
691	23.2	0.8	0.0	chr14	105133269	105133381	(1910337)	C	FLAM_C	SINE/Alu	(27)	116	3	1259319
29	16.8	4.8	5.5	chr14	105248546	105248649	(1795069)	+	G-rich	Low_complexity	1	109	(0)	1259422
14	7.5	3.3	3.2	chr14	105248799	105248828	(1794890)	+	(CGGCG)n	Simple_repeat	1	31	(0)	1259423
2317	7.5	2.0	0.3	chr14	105372626	105372918	(1670800)	+	AluY	SINE/Alu	1	298	(13)	1259602
3154	21.1	5.8	3.4	chr14	105372919	105373529	(1670189)	+	L1M4	LINE/L1	4433	5393	(753)	1259601
14	19.9	6.6	3.1	chr14	105398207	105398267	(1645451)	+	(CGCCC)n	Simple_repeat	1	65	(0)	1259622
521	31.8	8.4	10.2	chr14	105406769	105407061	(1636657)	C	L1M4	LINE/L1	(2907)	3239	2936	1259640
2220	12.1	1.0	0.3	chr14	105407062	105407367	(1636351)	C	AluSx	SINE/Alu	(4)	308	1	1259641
20	24.1	4.5	3.3	chr14	105474767	105474854	(1568864)	+	G-rich	Low_complexity	1	92	(0)	1259731
3496	24.6	4.0	0.9	chr14	106793686	106794857	(248861)	C	L1P4	LINE/L1	(2123)	4023	2814	1261075
45589	18.2	2.4	3.5	chr14	106836776	106845293	(198425)	C	HERV3-int	LTR/ERV1	(3)	8423	1	1261124
1824	17.3	0.0	2.9	chr15	22599786	22600097	(79391092)	C	AluSp	SINE/Alu	(10)	303	1	1265982
1474	14.7	0.7	10.7	chr15	22600098	22600324	(79390865)	+	AluJb	SINE/Alu	110	312	(0)	1265981
1716	15.6	4.7	2.7	chr15	22870319	22870613	(79120576)	C	AluJr	SINE/Alu	(11)	301	1	1266464
10599	18.4	6.7	4.9	chr15	25824612	25824879	(76166310)	+	L1M4	LINE/L1	5	265	(7252)	1270565
766	23.6	5.3	0.0	chr15	25824880	25825040	(76166149)	+	AluJo	SINE/Alu	137	306	(6)	1270566
529	27.7	15.4	7.6	chr15	29183390	29183979	(72807210)	+	L1ME3Cz	LINE/L1	337	980	(17)	1275072
8033	20.4	6.8	5.8	chr15	29366983	29368040	(72623149)	+	L1M4	LINE/L1	2	1144	(6373)	1275337
3440	22.3	3.1	3.0	chr15	29522393	29523169	(72468020)	+	L1MB7	LINE/L1	4	781	(6736)	1275563
237	35.3	12.7	8.3	chr15	32852139	32852384	(69138805)	+	L2c	LINE/L2	2403	2674	(745)	1280501
1503	15.1	6.6	0.0	chr15	32852385	32852623	(69138566)	C	AluJr	SINE/Alu	(13)	299	44	1280502
372	27.6	6.1	3.4	chr15	33075051	33075196	(68915993)	+	MIR	SINE/MIR	34	182	(80)	1280806
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
702	31.8	21.0	1.2	chr15	38730776	38731446	(63259743)	+	L3	LINE/CR1	3250	4088	(11)	1288777
1256	29.2	6.8	9.6	chr15	41680437	41681103	(60310086)	C	MER21C	LTR/ERVL	(164)	774	128	1293902
487	32.7	3.8	8.7	chr15	41788298	41788629	(60202560)	C	L2c	LINE/L2	(4)	3383	3069	1294102
6233	16.0	3.6	4.4	chr15	42375654	42376897	(59614292)	C	L1MC3	LINE/L1	(7)	7953	6721	1294994
1542	14.4	4.6	5.6	chr15	43326068	43326187	(58665002)	C	AluJb	SINE/Alu	(193)	119	1	1296786
367	24.7	4.5	0.0	chr15	44028995	44029079	(57962110)	+	L2a	LINE/L2	3338	3426	(0)	1298071
1265	29.9	5.0	1.1	chr15	44441257	44441808	(57549381)	C	L1MCc	LINE/L1	(5824)	599	25	1298924
2238	22.0	5.8	1.4	chr15	45513474	45513967	(56477222)	+	L1M4	LINE/L1	2	518	(6999)	1300819
1050	15.0	3.2	0.6	chr15	52738377	52738557	(49252632)	+	L1M4	LINE/L1	17	202	(7315)	1311811
2612	11.0	4.9	0.9	chr15	52738558	52738987	(49252202)	+	LTR7	LTR/ERV1	1	448	(2)	1311812
7390	20.6	8.6	9.2	chr15	55132433	55134485	(46856704)	C	L1M4b	LINE/L1	(4822)	2045	6	1315013
16087	12.7	1.2	4.8	chr15	55520739	55522273	(46468916)	C	L1PA15	LINE/L1	(223)	7937	6420	1315726
19070	14.8	3.5	2.1	chr15	55971639	55973257	(46017932)	+	L1M1	LINE/L1	2524	4180	(3385)	1316502
2334	10.5	0.0	2.0	chr15	58755773	58756077	(43235112)	C	AluSz	SINE/Alu	(12)	300	2	1320732
15	21.5	1.6	6.5	chr15	61038484	61038544	(40952645)	+	(CAGT)n	Simple_repeat	1	62	(0)	1324698
377	30.1	3.1	3.5	chr15	61038772	61038950	(40952239)	C	MIR3	SINE/MIR	(35)	173	3	1324699
5702	22.1	3.0	1.6	chr15	61891781	61894023	(40097166)	+	L1MA4	LINE/L1	1251	3516	(4049)	1326062
431	27.2	7.1	13.2	chr15	64536322	64536503	(37454686)	+	MLT1N2	LTR/ERVL-MaLR	393	562	(0)	1330583
12	27.2	0.0	3.9	chr15	65185348	65185353	(36805836)	+	(CCCCAC)n	Simple_repeat	1	48	(0)	1332077
13	24.6	0.0	2.4	chr15	65185354	65185395	(36805794)	+	(CCCCCT)n	Simple_repeat	1	42	(0)	1332078
237	28.8	9.8	7.7	chr15	65305347	65305533	(36685656)	C	L1M5	LINE/L1	(561)	5681	5486	1332348
2284	8.0	1.3	1.0	chr15	65305534	65305844	(36685345)	+	AluSq	SINE/Alu	2	313	(0)	1332349
13	26.2	3.7	5.9	chr15	65377693	65377700	(36613489)	+	(CGG)n	Simple_repeat	1	12	(73)	1332490
20	10.1	0.0	0.0	chr15	65377701	65377732	(36613457)	+	(GCA)n	Simple_repeat	1	32	(0)	1332491
13	26.2	3.7	5.9	chr15	65377733	65377774	(36613415)	+	(CGG)n	Simple_repeat	13	85	(0)	1332490
304	12.2	0.0	0.0	chr15	65414950	65414990	(36576199)	C	Alu	SINE/Alu	(91)	42	2	1332569
181	27.8	1.8	0.0	chr15	65415006	65415059	(36576130)	+	MIRc	SINE/MIR	213	267	(1)	1332570
12	17.0	8.3	1.9	chr15	65423107	65423154	(36568035)	+	(CCCTGCG)n	Simple_repeat	1	52	(0)	1332587
256	23.5	5.5	3.4	chr15	66043133	66043220	(35947969)	+	L2c	LINE/L2	3276	3365	(22)	1333886
682	17.9	8.5	0.7	chr15	66178577	66178728	(35812461)	C	MER96	DNA/hAT-Tip100	(5)	170	6	1334119
25	24.4	0.9	6.4	chr15	66253680	66253702	(35737487)	+	(GCGGCGG)n	Simple_repeat	1	61	(49)	1334276
13	25.6	5.7	2.7	chr15	66253703	66253772	(35737417)	+	(GCGG)n	Simple_repeat	1	74	(0)	1334277
25	24.4	0.9	6.4	chr15	66253773	66253788	(35737401)	+	(GCGGCGG)n	Simple_repeat	62	110	(0)	1334276
23	21.7	3.5	4.4	chr15	66253803	66253904	(35737285)	+	(TCCC)n	Simple_repeat	1	100	(0)	1334278
1140	25.7	14.0	6.2	chr15	66682290	66682530	(35308659)	+	MLT1H	LTR/ERVL-MaLR	14	266	(283)	1335243
2143	20.6	11.6	2.9	chr15	66682531	66683040	(35308149)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	1335244
1904	16.4	1.7	0.0	chr15	66817836	66818128	(35173061)	C	AluJb	SINE/Alu	(13)	299	2	1335507
2343	9.6	0.0	0.0	chr15	66818138	66818428	(35172761)	C	AluY	SINE/Alu	(20)	291	1	1335508
6902	17.3	3.6	2.4	chr15	67273370	67275532	(34715657)	C	L1MA4	LINE/L1	(4158)	3407	1242	1336348
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
29	16.2	1.3	5.2	chr15	67542696	67542771	(34448418)	+	(CGC)n	Simple_repeat	1	77	(0)	1336780
16	20.8	5.3	1.7	chr15	67823217	67823273	(34167916)	+	(GCGG)n	Simple_repeat	1	60	(0)	1337183
39	30.9	2.7	2.1	chr15	68229676	68229860	(33761329)	+	G-rich	Low_complexity	1	190	(0)	1337961
268	23.6	11.5	9.0	chr15	68926925	68927101	(33064088)	C	L1ME3G	LINE/L1	(251)	673	492	1339320
983	31.3	6.4	4.0	chr15	68927117	68927942	(33063247)	+	ERVL-E-int	LTR/ERVL	1581	2553	(2443)	1339321
361	20.4	8.8	7.9	chr15	69146338	69146438	(32844751)	+	MIR3	SINE/MIR	75	176	(32)	1339722
21	16.2	2.9	5.6	chr15	70097012	70097080	(31894109)	+	G-rich	Low_complexity	1	71	(0)	1341462
1371	34.6	6.7	5.1	chr15	70270839	70271841	(31719348)	+	ERVL-B4-int	LTR/ERVL	4184	5277	(437)	1341830
18	28.7	0.0	2.8	chr15	72230283	72230354	(29760835)	+	(CCCGCCG)n	Simple_repeat	1	69	(0)	1345107
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
744	24.9	5.1	1.8	chr15	72446748	72446976	(29544213)	+	MLT1L	LTR/ERVL-MaLR	345	581	(29)	1345478
720	17.0	7.8	0.0	chr15	72447039	72447144	(29544045)	+	FLAM_A	SINE/Alu	1	115	(27)	1345479
293	26.5	17.0	1.8	chr15	72499722	72499890	(29491299)	C	HAL1	LINE/L1	(607)	1900	1701	1345602
368	28.7	2.5	0.0	chr15	73010548	73010662	(28980527)	+	L1M6	LINE/L1	3	120	(6376)	1346451
19	17.9	1.9	3.6	chr15	73052520	73052573	(28938616)	+	G-rich	Low_complexity	1	55	(0)	1346528
13	10.5	6.5	0.0	chr15	73052629	73052659	(28938530)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	1346529
21	15.4	4.8	6.9	chr15	73052747	73052829	(28938360)	+	G-rich	Low_complexity	1	87	(0)	1346530
15	14.4	5.0	2.4	chr15	73927563	73927602	(28063587)	+	(GCC)n	Simple_repeat	1	42	(0)	1347952
1628	26.3	9.9	8.5	chr15	74155162	74155282	(27835907)	C	Arthur1B	DNA/hAT-Tip100	(758)	467	351	1348347
837	25.0	7.5	2.0	chr15	74155279	74155528	(27835661)	+	MLT1H2	LTR/ERVL-MaLR	286	545	(4)	1348352
349	30.4	7.3	3.2	chr15	74155531	74155778	(27835411)	C	L1ME3A	LINE/L1	(4885)	2218	1960	1348331
19	12.0	2.8	0.0	chr15	74433806	74433841	(27557348)	+	(CAG)n	Simple_repeat	1	37	(0)	1348811
376	20.5	14.2	3.0	chr15	74575327	74575457	(27415732)	+	L2b	LINE/L2	3222	3369	(6)	1349124
16	14.7	0.0	0.0	chr15	74782153	74782207	(27208982)	+	(GCC)n	Simple_repeat	1	55	(0)	1349517
189	26.9	25.8	2.0	chr15	74835244	74835440	(27155749)	C	MIRb	SINE/MIR	(6)	262	3	1349608
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
565	23.5	10.4	1.9	chr15	75038715	75039141	(26952048)	C	HAL1	LINE/L1	(1088)	1377	877	1350057
443	27.7	13.9	6.0	chr15	75544661	75544910	(26446279)	+	L3	LINE/CR1	712	984	(3115)	1351039
316	31.7	16.2	3.9	chr15	75544911	75545169	(26446020)	+	L2b	LINE/L2	3062	3358	(17)	1351041
2165	6.6	4.3	4.9	chr15	75624377	75624681	(26366508)	+	AluYj4	SINE/Alu	1	303	(8)	1351236
2547	6.7	0.0	0.9	chr15	75624760	75625075	(26366114)	C	AluSq	SINE/Alu	(0)	313	1	1351237
8737	19.4	8.2	1.3	chr15	75938784	75941922	(26049267)	+	L1MB3	LINE/L1	3389	6774	(10)	1351765
4171	18.2	5.2	1.9	chr15	77339497	77340686	(24650503)	+	L1MC2	LINE/L1	4975	6203	(141)	1353888
346	25.7	10.8	4.5	chr15	77737501	77737810	(24253379)	+	L2a	LINE/L2	631	962	(1134)	1354569
19	21.8	2.2	7.5	chr15	77819292	77819383	(24171806)	+	(GCTCG)n	Simple_repeat	1	94	(0)	1354730
356	29.0	9.2	3.5	chr15	78049225	78049367	(23941822)	+	L2a	LINE/L2	3275	3426	(0)	1355099
15	25.5	6.0	4.8	chr15	78131221	78131337	(23859852)	+	(CCGCGGC)n	Simple_repeat	1	124	(0)	1355267
16	28.6	1.3	3.9	chr15	78131451	78131527	(23859662)	+	(GGCACCC)n	Simple_repeat	1	78	(0)	1355268
1488	17.0	10.3	3.8	chr15	78447628	78447749	(23543440)	C	AluJr	SINE/Alu	(179)	133	1	1355918
22	25.2	1.2	3.5	chr15	78447750	78447803	(23543386)	+	(TTTTTCT)n	Simple_repeat	5	55	(0)	1355920
230	24.7	14.7	2.1	chr15	80202953	80203047	(21788142)	+	MIRc	SINE/MIR	92	200	(68)	1359164
7442	13.7	3.7	5.7	chr15	82742048	82742976	(19248213)	+	L1MCa	LINE/L1	71	1019	(5489)	1363363
209	36.6	1.2	0.0	chr15	83127917	83127998	(18863191)	+	L2b	LINE/L2	3282	3364	(11)	1364104
2243	13.1	0.0	0.0	chr15	84785307	84785611	(17205578)	C	AluSz	SINE/Alu	(7)	305	1	1366663
751	21.8	6.0	1.9	chr15	85379504	85379709	(16611480)	C	L1ME3	LINE/L1	(29)	6133	5919	1367728
397	25.1	6.4	2.2	chr15	85379718	85379896	(16611293)	C	MER113B	DNA/hAT-Charlie	(72)	230	44	1367729
1611	22.4	0.6	2.3	chr15	87689745	87690095	(14301094)	+	L1M4	LINE/L1	13	357	(7160)	1371183
1904	29.1	12.4	3.8	chr15	89794514	89795835	(12195354)	+	HAL1	LINE/L1	282	1765	(742)	1374894
2615	12.2	4.4	4.2	chr15	90381107	90381477	(11609712)	C	MSTA	LTR/ERVL-MaLR	(38)	390	1	1376245
2757	6.2	0.0	0.0	chr15	90395313	90395619	(11595570)	C	AluYk3	SINE/Alu	(4)	307	1	1376283
1515	18.1	30.9	3.6	chr15	90460264	90460716	(11530473)	C	L1M4	LINE/L1	(6831)	686	95	1376409
2067	18.6	0.0	0.0	chr15	90460717	90461023	(11530166)	+	AluJb	SINE/Alu	1	307	(5)	1376411
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
29	3.2	0.0	0.0	chr15	92393898	92393929	(9597260)	+	(CGCTGC)n	Simple_repeat	1	32	(0)	1379800
13	21.1	0.0	2.5	chr15	93045995	93046034	(8945155)	+	A-rich	Low_complexity	1	40	(0)	1380923
1846	20.6	9.1	3.8	chr15	93046041	93046515	(8944674)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	1380924
1091	29.5	6.6	0.8	chr15	93733702	93734073	(8257116)	C	L1ME3D	LINE/L1	(6449)	418	24	1382066
1106	26.9	11.0	3.5	chr15	99603701	99603991	(2387198)	C	L1MEc	LINE/L1	(3425)	2894	2569	1390349
899	23.7	13.6	4.3	chr15	99604015	99604888	(2386301)	C	L1MEc	LINE/L1	(4846)	1554	588	1390349
17	21.4	2.7	6.6	chr15	100341683	100341756	(1649433)	+	(GCC)n	Simple_repeat	1	76	(0)	1391323
12	27.6	0.0	0.0	chr15	100341846	100341884	(1649305)	+	(CAG)n	Simple_repeat	1	39	(0)	1391324
20	28.8	2.0	4.0	chr15	101251700	101251798	(739391)	+	(CGG)n	Simple_repeat	1	101	(0)	1392534
16	17.1	0.0	4.7	chr16	72582	72624	(90265721)	+	(GCCC)n	Simple_repeat	1	43	(0)	1394138
12	21.6	0.0	0.0	chr16	78382	78413	(90259932)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1394142
17	4.0	0.0	3.6	chr16	642259	642286	(89696059)	+	(GCCCG)n	Simple_repeat	1	28	(0)	1395045
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
17	10.7	7.1	2.2	chr16	1351946	1351987	(88986358)	+	(GCG)n	Simple_repeat	1	45	(0)	1395772
27	13.7	0.0	0.0	chr16	1964480	1964527	(88373818)	+	(CCCCGG)n	Simple_repeat	1	48	(0)	1396721
17	17.0	2.5	0.0	chr16	1965349	1965388	(88372957)	+	(CTGACCC)n	Simple_repeat	1	41	(0)	1396722
28	34.0	1.5	0.8	chr16	1983983	1984112	(88354233)	+	(CCGGCC)n	Simple_repeat	1	132	(0)	1396745
13	19.5	0.0	2.7	chr16	2048028	2048064	(88290281)	+	(GCGCG)n	Simple_repeat	1	37	(0)	1396836
36	0.0	0.0	0.0	chr16	2148650	2148682	(88189663)	+	(GCC)n	Simple_repeat	1	33	(0)	1396960
17	15.3	2.7	0.0	chr16	2251462	2251498	(88086847)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	1397109
13	11.1	9.3	5.1	chr16	2752706	2752759	(87585586)	+	(GAGGC)n	Simple_repeat	1	59	(0)	1397879
6074	22.0	6.1	4.1	chr16	2808925	2809871	(87528474)	C	L1M2a	LINE/L1	(4035)	3133	2124	1397960
13	16.3	2.8	2.7	chr16	3013386	3013421	(87324924)	+	(GCTGG)n	Simple_repeat	1	37	(0)	1398334
19	23.5	2.9	2.9	chr16	3020314	3020381	(87317964)	+	(GGC)n	Simple_repeat	1	70	(0)	1398343
11	7.0	0.0	12.8	chr16	3020504	3020542	(87317803)	+	G-rich	Low_complexity	1	39	(0)	1398344
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
622	0.0	0.0	0.0	chr16	3189634	3189705	(87148640)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	1398695
612	1.4	0.0	0.0	chr16	3191501	3191573	(87146772)	+	tRNA-Lys-AAG	tRNA	1	73	(3)	1398698
192	26.3	9.5	5.0	chr16	3223047	3223146	(87115199)	C	MamSINE1	SINE/tRNA-RTE	(7)	283	179	1398771
1894	13.8	6.0	3.1	chr16	3293082	3293439	(87044906)	+	THE1D	LTR/ERVL-MaLR	1	369	(12)	1398913
320	28.8	8.8	0.8	chr16	3304824	3304982	(87033363)	+	MIR	SINE/MIR	6	174	(94)	1398928
18	19.7	2.7	6.7	chr16	3717380	3717452	(86620893)	+	(GCCC)n	Simple_repeat	1	75	(0)	1399696
12	22.3	0.0	7.4	chr16	3717424	3717477	(86620868)	+	(CCGGCG)n	Simple_repeat	1	54	(0)	1399697
25	15.6	3.5	0.0	chr16	4351130	4351186	(85987159)	+	(GGCGCCC)n	Simple_repeat	1	59	(0)	1400992
973	26.4	9.8	9.6	chr16	8605318	8605857	(81732488)	+	MLT1F2	LTR/ERVL-MaLR	20	560	(0)	1409401
357	30.6	3.1	1.9	chr16	8605858	8606017	(81732328)	+	L1M5	LINE/L1	5553	5714	(410)	1409400
322	27.9	2.2	0.3	chr16	10939704	10939791	(79398554)	C	L2a	LINE/L2	(26)	3400	3288	1414608
15	4.7	0.0	0.0	chr16	10939968	10939989	(79398356)	+	(GGCA)n	Simple_repeat	1	22	(0)	1414609
12	4.3	8.3	0.0	chr16	11256035	11256058	(79082287)	+	(CCCT)n	Simple_repeat	1	26	(0)	1415250
21	30.8	0.0	0.0	chr16	11742653	11742720	(78595625)	+	(GCC)n	Simple_repeat	1	68	(0)	1416395
742	28.2	10.0	0.0	chr16	11792578	11792793	(78545552)	C	MIR	SINE/MIR	(21)	241	2	1416491
1585	17.8	5.7	2.1	chr16	11816165	11816315	(78522030)	C	AluJb	SINE/Alu	(14)	298	135	1416557
2149	13.5	0.3	0.0	chr16	11816316	11816626	(78521719)	C	AluSz	SINE/Alu	(0)	312	1	1416558
17	4.3	0.0	0.0	chr16	11915649	11915672	(78422673)	+	(GCT)n	Simple_repeat	1	24	(0)	1416784
35	0.0	0.0	0.0	chr16	11915674	11915705	(78422640)	+	(CCG)n	Simple_repeat	1	32	(0)	1416785
7698	20.6	7.2	4.1	chr16	14097560	14099382	(76238963)	C	L1ME1	LINE/L1	(0)	6179	4308	1421511
2459	26.0	17.1	10.8	chr16	14236805	14238051	(76100294)	C	L2a	LINE/L2	(628)	2791	1381	1421711
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
1847	15.8	1.0	2.5	chr16	15792718	15793034	(74545311)	C	AluSz	SINE/Alu	(0)	312	1	1425232
62572	4.7	0.6	0.1	chr16	19394167	19401565	(70936780)	C	HERVK14C-int	LTR/ERVK	(0)	7434	1	1433467
2046	10.2	6.0	1.1	chr16	19506373	19506656	(70831689)	+	AluSx	SINE/Alu	1	299	(13)	1433734
1944	23.5	10.9	7.8	chr16	19506657	19506851	(70831494)	+	L1MC5	LINE/L1	8889	9068	(236)	1433733
616	24.6	14.5	1.0	chr16	21215034	21215230	(69123115)	C	LTR107_Mam	LTR	(208)	362	135	1437425
367	22.2	0.0	1.2	chr16	21215251	21215332	(69123013)	C	LTR107_Mam	LTR	(489)	81	1	1437425
1261	22.5	23.6	9.8	chr16	22739145	22739515	(67598830)	+	LTR50	LTR/ERVL	1	521	(274)	1440731
209	23.9	12.8	12.8	chr16	22937269	22937326	(67401019)	+	MIRb	SINE/MIR	26	81	(187)	1441132
1895	14.6	1.7	1.0	chr16	22937327	22937621	(67400724)	C	AluSp	SINE/Alu	(16)	297	1	1441133
15	29.0	0.0	4.4	chr16	23510188	23510255	(66828090)	+	(CCCGGC)n	Simple_repeat	1	68	(0)	1442437
23	30.6	1.2	0.0	chr16	23510378	23510461	(66827884)	+	(CCGCCG)n	Simple_repeat	1	85	(0)	1442438
235	14.3	0.0	2.3	chr16	23522525	23522567	(66815778)	+	MLT1O	LTR/ERVL-MaLR	508	549	(13)	1442474
12	18.8	5.8	3.6	chr16	23558049	23558100	(66780245)	+	(CGGCAGC)n	Simple_repeat	1	55	(0)	1442575
749	23.3	1.1	7.4	chr16	24623931	24624037	(65714308)	C	MER45A	DNA/hAT-Tip100	(82)	96	1	1445124
717	25.0	13.6	9.9	chr16	24624038	24624399	(65713946)	C	MLT1H	LTR/ERVL-MaLR	(164)	385	5	1445121
28	0.0	3.3	0.0	chr16	28925338	28925367	(61412978)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	1454764
183	25.5	0.0	2.1	chr16	29995016	29995063	(60343282)	+	L2b	LINE/L2	3328	3374	(1)	1457034
11	17.1	2.9	2.8	chr16	29995281	29995315	(60343030)	+	(CCTCCG)n	Simple_repeat	1	36	(0)	1457035
2247	9.1	0.0	0.0	chr16	30127636	30127932	(60210413)	C	AluSg	SINE/Alu	(13)	297	1	1457323
336	26.0	1.0	1.0	chr16	30128012	30128108	(60210237)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	499	1457324
1016	22.9	7.8	3.9	chr16	30133181	30133441	(60204904)	+	AluJo	SINE/Alu	21	296	(16)	1457339
553	19.7	0.8	0.8	chr16	30133443	30133565	(60204780)	C	L1M4b	LINE/L1	(6713)	154	32	1457336
1045	15.7	10.3	13.3	chr16	30150254	30150329	(60188016)	C	MER21A	LTR/ERVL	(5)	863	811	1457392
2093	13.1	0.0	0.3	chr16	30150330	30150641	(60187704)	+	AluSx3	SINE/Alu	1	311	(0)	1457393
229	33.3	18.4	0.0	chr16	30178643	30178810	(60159535)	C	MIRb	SINE/MIR	(35)	233	28	1457472
25	10.2	0.0	2.3	chr16	30183646	30183689	(60154656)	+	(CTC)n	Simple_repeat	1	44	(0)	1457487
15	17.7	5.0	2.4	chr16	30183779	30183818	(60154527)	+	(GC)n	Simple_repeat	1	42	(0)	1457488
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
2505	3.5	0.0	0.0	chr16	30917999	30918284	(59420061)	C	AluYe6	SINE/Alu	(24)	286	1	1459189
13	12.8	5.6	2.6	chr16	30928646	30928681	(59409664)	+	(TCCCT)n	Simple_repeat	1	38	(0)	1459214
210	31.6	7.3	5.8	chr16	30956924	30957044	(59381301)	+	MIR1_Amn	SINE/MIR	31	153	(77)	1459288
21	19.2	3.2	3.1	chr16	30958013	30958075	(59380270)	+	(CGC)n	Simple_repeat	1	65	(0)	1459289
1375	21.5	16.1	2.3	chr16	31877258	31877775	(58460570)	C	MER92B	LTR/ERV1	(0)	636	34	1460891
1228	24.4	7.5	0.6	chr16	31877810	31878159	(58460186)	+	MER21C	LTR/ERVL	521	896	(42)	1460892
588	22.7	8.6	5.6	chr16	31882662	31882876	(58455469)	C	L1MC4a	LINE/L1	(395)	7487	7266	1460900
344	32.4	2.6	0.9	chr16	46621615	46621726	(43716619)	+	MIRc	SINE/MIR	4	117	(151)	1465698
11	26.2	6.2	1.4	chr16	46973334	46973348	(43364997)	+	(GCGCCG)n	Simple_repeat	1	67	(0)	1466441
13	25.7	2.1	2.0	chr16	46973349	46973396	(43364949)	+	(CCG)n	Simple_repeat	1	49	(0)	1466442
2361	28.4	9.6	8.7	chr16	48597865	48599041	(41739304)	+	MER21-int	LTR/ERVL	612	1797	(2394)	1469061
734	25.2	3.3	0.5	chr16	48890259	48890475	(41447870)	C	LTR16	LTR/ERVL	(0)	451	233	1469601
272	28.3	11.7	0.0	chr16	50662453	50662558	(39675787)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	430	1472944
947	28.1	5.2	3.2	chr16	50662577	50662915	(39675430)	C	MLT1H	LTR/ERVL-MaLR	(203)	346	1	1472944
17	14.6	6.4	2.0	chr16	54285946	54285992	(36052353)	+	(GCC)n	Simple_repeat	1	50	(0)	1479230
12	14.8	0.0	5.9	chr16	54286156	54286189	(36052156)	+	(GCTGC)n	Simple_repeat	1	34	(0)	1479231
532	24.0	10.2	2.2	chr16	54698002	54698180	(35640165)	C	Kanga1b	DNA/TcMar-Tc2	(0)	779	585	1479980
376	32.0	0.0	3.2	chr16	56013967	56014092	(34324253)	+	MIRb	SINE/MIR	118	239	(29)	1482380
26	0.0	0.0	0.0	chr16	56415114	56415138	(33923207)	+	(AAAAC)n	Simple_repeat	1	25	(0)	1483004
284	28.2	12.5	8.4	chr16	56415244	56415518	(33922827)	+	Tigger10	DNA/TcMar-Tigger	1518	1805	(39)	1483005
1213	13.3	26.7	0.0	chr16	57818003	57818246	(32520099)	C	AluSz	SINE/Alu	(0)	312	1	1485805
13	15.8	0.0	5.0	chr16	57818247	57818266	(32520079)	+	(TTTC)n	Simple_repeat	4	21	(0)	1485806
187	28.7	15.0	0.9	chr16	57818301	57818364	(32519981)	C	MIRc	SINE/MIR	(131)	137	70	1485800
1862	16.9	1.3	0.0	chr16	57818365	57818659	(32519686)	C	AluJb	SINE/Alu	(12)	300	2	1485807
2042	8.0	5.7	0.0	chr16	58053991	58054254	(32284091)	C	AluSx4	SINE/Alu	(30)	280	1	1486331
15	18.3	7.5	4.2	chr16	66751661	66751727	(23586618)	+	(GCC)n	Simple_repeat	1	72	(0)	1500336
14	17.9	6.5	4.5	chr16	67014089	67014150	(23324195)	+	(CCGC)n	Simple_repeat	1	66	(0)	1500882
286	32.2	7.6	0.0	chr16	67415898	67416018	(22922327)	+	L2b	LINE/L2	3245	3375	(0)	1501591
16	17.4	0.0	4.7	chr16	67842337	67842379	(22495966)	+	(GCGG)n	Simple_repeat	1	43	(0)	1502467
29	0.0	0.0	0.0	chr16	67893278	67893304	(22445041)	+	(GGC)n	Simple_repeat	1	27	(0)	1502544
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
343	39.7	5.5	1.0	chr16	69892514	69892539	(20445806)	+	L2c	LINE/L2	2757	2783	(636)	1506821
2002	14.6	0.3	0.3	chr16	69892540	69892833	(20445512)	C	AluJo	SINE/Alu	(18)	294	1	1506822
2255	10.8	0.0	0.0	chr16	70739958	70740253	(19598092)	C	AluSx	SINE/Alu	(9)	303	8	1508551
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
17	24.6	1.4	5.3	chr16	71884005	71884078	(18454267)	+	(GCCGG)n	Simple_repeat	1	75	(0)	1510563
14	8.9	11.1	0.0	chr16	71884098	71884133	(18454212)	+	(CAGA)n	Simple_repeat	1	40	(0)	1510564
951	23.5	8.4	6.3	chr16	72642635	72642870	(17695475)	+	L1ME3	LINE/L1	5903	6143	(19)	1511783
386	19.6	8.1	3.3	chr16	72642868	72643103	(17695242)	+	L1MC4	LINE/L1	5371	5671	(570)	1511772
334	27.5	10.0	2.3	chr16	72643106	72643280	(17695065)	C	MLT1J-int	LTR/ERVL-MaLR	(658)	729	540	1511786
20	6.5	0.0	2.9	chr16	73096162	73096195	(17242150)	+	(CTGC)n	Simple_repeat	1	34	(0)	1512405
216	36.4	6.0	0.9	chr16	75461674	75461784	(14876561)	+	L2c	LINE/L2	3270	3386	(1)	1516844
3406	14.2	15.8	0.2	chr16	75691799	75692410	(14645935)	+	LTR9A1	LTR/ERV1	1	726	(2)	1517317
4390	17.0	12.1	1.9	chr16	78529943	78530747	(11807598)	C	LTR1D1	LTR/ERV1	(0)	899	1	1521873
187	32.7	1.8	0.0	chr16	78748395	78748449	(11589896)	C	L2c	LINE/L2	(19)	3368	3313	1522319
17	15.9	0.0	2.7	chr16	79600218	79600254	(10738091)	+	(GCG)n	Simple_repeat	1	37	(0)	1523838
2121	21.6	9.5	2.1	chr16	84109367	84109977	(6228368)	+	L1MC4	LINE/L1	7241	7901	(141)	1532162
14	12.4	2.6	5.0	chr16	84116591	84116629	(6221716)	+	(GCCCCC)n	Simple_repeat	1	40	(0)	1532174
4444	10.7	5.2	0.2	chr16	84207346	84207972	(6130373)	+	PABL_A	LTR/ERV1	1	660	(0)	1532336
255	18.8	0.0	0.0	chr16	84819672	84819719	(5518626)	+	MIRb	SINE/MIR	205	252	(16)	1533635
18	25.4	1.4	4.2	chr16	85011296	85011366	(5326979)	+	(GGC)n	Simple_repeat	1	72	(0)	1534008
518	16.5	6.5	1.0	chr16	85191296	85191433	(5146912)	C	L1MB7	LINE/L1	(17)	6163	6025	1534360
26	21.1	1.5	1.5	chr16	87392347	87392413	(2945932)	+	(CGC)n	Simple_repeat	1	68	(0)	1538356
40	2.5	0.0	0.0	chr16	87492912	87492952	(2845393)	+	(CGGCGA)n	Simple_repeat	1	41	(0)	1538508
1521	22.4	0.3	0.3	chr16	87971798	87972092	(2366253)	C	AluJr	SINE/Alu	(17)	295	1	1539428
3219	25.8	12.8	4.3	chr16	87972093	87973165	(2365180)	C	L1M8	LINE/L1	(1128)	1227	34	1539427
14	23.1	3.4	3.3	chr16	89093689	89093747	(1244598)	+	(CCACGG)n	Simple_repeat	1	61	(0)	1540793
2467	5.0	0.0	0.0	chr16	89458222	89458523	(879822)	C	AluY	SINE/Alu	(9)	302	1	1541287
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
581	26.4	7.5	3.9	chr17	210719	211053	(83046388)	C	HAL1	LINE/L1	(1166)	1341	994	1544798
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
2202	9.8	0.0	1.4	chr17	1773247	1773541	(81483900)	C	AluSx1	SINE/Alu	(15)	297	7	1547774
431	25.6	5.3	0.8	chr17	1773544	1773669	(81483772)	+	MIR	SINE/MIR	38	169	(93)	1547775
2227	12.9	0.0	0.7	chr17	1774189	1774497	(81482944)	C	AluSq	SINE/Alu	(6)	307	1	1547777
1256	20.6	12.1	0.0	chr17	1774499	1774760	(81482681)	C	AluSz	SINE/Alu	(13)	299	2	1547778
17	26.5	0.0	3.2	chr17	1829801	1829862	(81427579)	+	(CCCGC)n	Simple_repeat	1	62	(0)	1547918
16	11.9	0.0	7.1	chr17	2049889	2049930	(81207511)	+	(CGCGG)n	Simple_repeat	1	42	(0)	1548358
14	23.8	0.0	5.5	chr17	2050240	2050294	(81207147)	+	(GCCGCG)n	Simple_repeat	1	55	(0)	1548359
13	23.4	2.4	0.0	chr17	4911344	4911384	(78346057)	+	G-rich	Low_complexity	1	42	(0)	1554035
1772	15.5	1.0	3.9	chr17	4966138	4966277	(78291164)	C	AluJb	SINE/Alu	(177)	135	1	1554148
333	28.6	4.9	5.8	chr17	4966331	4966434	(78291007)	+	MIR	SINE/MIR	4	106	(156)	1554150
11	18.8	8.0	1.9	chr17	5438851	5438900	(77818541)	+	(GCAGGC)n	Simple_repeat	1	54	(0)	1555141
28	0.0	3.3	0.0	chr17	7034189	7034218	(76223223)	+	(AAAACAA)n	Simple_repeat	1	31	(0)	1558106
409	31.5	8.3	6.8	chr17	7034297	7034487	(76222954)	C	MIR	SINE/MIR	(6)	256	52	1558107
1337	23.9	11.8	3.5	chr17	7534866	7535351	(75722090)	C	L1M4b	LINE/L1	(6025)	842	175	1559000
2390	7.4	0.0	1.0	chr17	7535352	7535650	(75721791)	C	AluSc8	SINE/Alu	(15)	296	1	1559016
707	2.4	0.0	0.0	chr17	8120314	8120395	(75137046)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	1560130
648	1.4	0.0	0.0	chr17	8125746	8125817	(75131624)	+	tRNA-Gly-GGY	tRNA	1	72	(2)	1560137
691	0.0	0.0	0.0	chr17	8139452	8139525	(75117916)	C	tRNA-Thr-ACY	tRNA	(3)	74	1	1560172
670	0.0	0.0	0.0	chr17	8186358	8186429	(75071012)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1560263
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
779	1.2	0.0	0.0	chr17	8226607	8226691	(75030750)	C	tRNA-Ser-TCY	tRNA	(0)	85	1	1560366
7335	24.8	5.1	4.8	chr17	8775993	8777103	(74480338)	C	L1M4a2	LINE/L1	(1628)	1526	15	1561448
283	35.0	6.0	0.6	chr17	9435133	9435290	(73822151)	C	L2b	LINE/L2	(887)	2532	2366	1562702
1944	16.4	0.0	0.7	chr17	10646772	10647075	(72610366)	+	AluJb	SINE/Alu	7	308	(4)	1565019
463	31.4	3.7	4.9	chr17	10879122	10879285	(72378156)	+	MIR3	SINE/MIR	10	171	(37)	1565468
22442	12.6	2.0	1.1	chr17	12150122	12155536	(71101905)	+	L1PA10	LINE/L1	7	6547	(1034)	1567607
3978	21.5	7.5	2.6	chr17	13323387	13324342	(69933099)	C	L1M4	LINE/L1	(6502)	1015	9	1569585
4926	13.6	3.4	1.4	chr17	13475687	13476489	(69780952)	+	LTR8B	LTR/ERV1	1	820	(0)	1569839
3140	22.7	9.7	3.0	chr17	13511112	13512019	(69745422)	+	Zaphod	DNA/hAT-Tip100	15	990	(3041)	1569891
268	15.4	7.1	0.0	chr17	13546780	13546831	(69710610)	+	L2a	LINE/L2	3370	3425	(1)	1569947
205	29.4	3.2	0.0	chr17	13650310	13650410	(69607031)	+	MIR3	SINE/MIR	20	120	(88)	1570136
284	30.1	1.0	0.5	chr17	13650571	13650664	(69606777)	C	L2c	LINE/L2	(32)	3343	3250	1570137
290	35.5	6.6	1.2	chr17	13888034	13888278	(69369163)	C	LTR88b	LTR/Gypsy?	(435)	402	144	1570527
238	19.4	5.6	5.6	chr17	13888300	13888370	(69369071)	C	LTR88b	LTR/Gypsy?	(783)	79	9	1570527
647	27.4	9.7	2.5	chr17	14057819	14058132	(69199309)	+	Charlie18a	DNA/hAT-Charlie	4	342	(0)	1570841
5427	29.3	8.6	5.4	chr17	14933961	14937044	(68320397)	C	ERV3-16A3_I-int	LTR/ERVL	(337)	4889	1702	1572248
23	6.9	1.9	7.4	chr17	16000038	16000090	(67257351)	+	G-rich	Low_complexity	1	54	(0)	1574054
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
1905	10.8	0.3	11.1	chr17	16252936	16253301	(67004140)	+	AluSp	SINE/Alu	1	313	(0)	1574527
436	22.5	2.6	2.6	chr17	17448737	17448850	(65808591)	+	MER5B	DNA/hAT-Charlie	1	114	(64)	1576683
182	32.2	4.7	5.5	chr17	17675846	17675973	(65581468)	+	OldhAT1	DNA/hAT-Ac	2548	2674	(174)	1577132
315	27.3	10.1	2.0	chr17	17676033	17676178	(65581263)	+	MIR3	SINE/MIR	4	162	(46)	1577133
2637	7.1	0.0	0.0	chr17	18016893	18017201	(65240240)	+	AluSg	SINE/Alu	2	310	(0)	1577781
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
6725	20.1	6.0	4.6	chr17	19621376	19622019	(63635422)	C	L1M4	LINE/L1	(6760)	757	104	1580971
474	28.7	10.3	2.8	chr17	20270710	20271068	(62986373)	C	L1ME4b	LINE/L1	(485)	407	19	1582236
1009	26.9	13.0	3.5	chr17	20271085	20271689	(62985752)	C	HAL1	LINE/L1	(0)	2507	1837	1582237
2761	30.2	6.0	1.8	chr17	20876845	20877755	(62379686)	C	L1M4b	LINE/L1	(5914)	953	2	1583254
3992	24.3	8.9	4.2	chr17	21470520	21471271	(61786170)	C	L1M4	LINE/L1	(6693)	824	24	1584309
2756	30.5	5.8	1.8	chr17	21603323	21604235	(61653206)	+	L1M4b	LINE/L1	2	953	(5914)	1584513
2761	30.7	5.8	1.8	chr17	22099191	22100103	(61157338)	C	L1M4b	LINE/L1	(5914)	953	2	1584979
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
28582	13.3	1.7	1.6	chr17	27687309	27694960	(55562481)	C	HERVK11-int	LTR/ERVK	(1)	7952	1	1587250
5099	16.2	4.8	4.1	chr17	28652607	28653530	(54603911)	+	L1MC3	LINE/L1	6642	7585	(200)	1589081
2187	8.9	0.7	0.4	chr17	28653531	28653811	(54603630)	+	AluSg	SINE/Alu	1	282	(28)	1589084
275	33.6	0.0	0.9	chr17	29042850	29042963	(54214478)	+	Eulor8	DNA/TcMar?	381	493	(69)	1589828
13	17.0	3.0	0.0	chr17	29589693	29589725	(53667716)	+	(CCCCG)n	Simple_repeat	1	34	(0)	1590971
13	25.9	3.2	3.1	chr17	29589778	29589840	(53667601)	+	(GGCCGC)n	Simple_repeat	1	65	(0)	1590972
1272	15.9	0.0	0.0	chr17	30031206	30031394	(53226047)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1591801
238	20.9	7.0	1.4	chr17	30031552	30031660	(53225781)	C	MIR	SINE/MIR	(84)	178	13	1591802
10579	13.2	3.9	4.4	chr17	30157320	30159648	(53097793)	C	L1MA4A	LINE/L1	(7)	6296	3987	1592062
195	33.3	9.2	1.0	chr17	31558703	31558802	(51698639)	C	MIRb	SINE/MIR	(36)	232	124	1594821
17	20.5	3.9	1.9	chr17	32007641	32007692	(51249749)	+	(CCG)n	Simple_repeat	1	54	(0)	1595844
227	29.7	1.5	0.0	chr17	32142119	32142182	(51115259)	C	L2b	LINE/L2	(62)	3313	3249	1596166
222	26.1	16.2	9.3	chr17	32142187	32142283	(51115158)	+	MIR3	SINE/MIR	60	164	(44)	1596167
56	0.0	0.0	0.0	chr17	32142452	32142501	(51114940)	+	(CCG)n	Simple_repeat	1	50	(0)	1596168
758	31.9	6.6	3.8	chr17	32289625	32290067	(50967374)	C	Mam_R4	LINE/Dong-R4	(83)	3726	3271	1596472
18	19.1	3.7	7.1	chr17	32486611	32486692	(50770749)	+	(GGCG)n	Simple_repeat	1	85	(0)	1596915
208	29.7	5.9	0.0	chr17	32829377	32829440	(50428001)	+	MIRb	SINE/MIR	35	102	(166)	1597486
2171	12.2	0.3	0.3	chr17	32829451	32829752	(50427689)	C	AluSz6	SINE/Alu	(9)	303	2	1597487
3910	16.8	1.7	4.0	chr17	33745345	33746169	(49511272)	+	L1M4b	LINE/L1	1865	2670	(4197)	1599235
1060	18.5	3.2	3.2	chr17	33983726	33983943	(49273498)	+	MER20	DNA/hAT-Charlie	1	218	(1)	1599679
25	21.1	5.3	0.0	chr17	34980634	34980709	(48276732)	+	(CGCGG)n	Simple_repeat	1	80	(0)	1601461
2600	16.9	4.9	2.0	chr17	36640179	36640674	(46616767)	C	L1MB8	LINE/L1	(0)	6178	5668	1604316
1840	16.5	0.3	5.4	chr17	38947953	38948207	(44309234)	C	L1MB8	LINE/L1	(0)	6178	5933	1608936
2871	22.1	10.2	4.1	chr17	39375672	39375837	(43881604)	+	L1M4	LINE/L1	83	269	(7248)	1609934
2225	9.9	0.0	0.0	chr17	39375838	39376120	(43881321)	+	AluSx3	SINE/Alu	1	283	(28)	1609936
28	0.0	0.0	0.0	chr17	39573626	39573651	(43683790)	+	(CGC)n	Simple_repeat	1	26	(0)	1610387
385	35.5	12.5	5.3	chr17	40486381	40486963	(42770478)	+	L2b	LINE/L2	2741	3372	(3)	1612149
17	24.2	0.0	0.0	chr17	42532066	42532109	(40725332)	+	(CAG)n	Simple_repeat	1	44	(0)	1615836
35	20.4	1.0	4.1	chr17	42532129	42532225	(40725216)	+	(CGC)n	Simple_repeat	1	98	(0)	1615837
12	19.7	0.0	0.0	chr17	42679606	42679634	(40577807)	+	(GGC)n	Simple_repeat	1	29	(0)	1616139
19	9.2	6.0	3.8	chr17	42761382	42761431	(40496010)	+	G-rich	Low_complexity	1	53	(0)	1616315
381	30.2	6.5	11.8	chr17	43388857	43389213	(39868228)	+	L2c	LINE/L2	3050	3386	(1)	1617686
248	22.7	2.2	17.0	chr17	43538715	43538820	(39718621)	+	L3b	LINE/CR1	5013	5102	(130)	1618061
12	19.6	2.9	0.0	chr17	44123383	44123417	(39134024)	+	(GGAGCGC)n	Simple_repeat	1	36	(0)	1619259
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
39	24.9	1.0	0.0	chr17	44219550	44219649	(39037792)	+	(GCG)n	Simple_repeat	1	101	(0)	1619463
1497	23.4	4.5	1.0	chr17	47075738	47076127	(36181314)	+	MLT1C	LTR/ERVL-MaLR	7	423	(44)	1625286
312	23.3	0.0	16.1	chr17	47076160	47076302	(36181139)	C	MIRc	SINE/MIR	(123)	145	26	1625287
5569	14.8	9.2	8.8	chr17	47076349	47076577	(36180864)	+	Tigger3b	DNA/TcMar-Tigger	1	265	(966)	1625288
462	25.2	7.8	2.5	chr17	47358403	47358740	(35898701)	C	L1ME3G	LINE/L1	(743)	5403	5072	1625853
1517	17.7	0.7	0.7	chr17	47358756	47359028	(35898413)	C	L1M4	LINE/L1	(7237)	280	8	1625854
229	29.3	0.0	0.0	chr17	48024509	48024566	(35232875)	+	MIRb	SINE/MIR	120	177	(91)	1627148
16	20.9	1.1	10.1	chr17	48625316	48625427	(34632014)	+	(CCGGCCC)n	Simple_repeat	1	101	(0)	1628155
14	24.6	3.3	3.2	chr17	48625916	48625976	(34631465)	+	(CGCCGG)n	Simple_repeat	1	63	(0)	1628156
15	18.4	8.2	3.8	chr17	49495286	49495358	(33762083)	+	(CGCAG)n	Simple_repeat	1	79	(0)	1630053
47800	6.1	0.6	0.9	chr17	50413151	50420005	(32837436)	C	Harlequin-int	LTR/ERV1	(0)	6896	1	1631734
2463	15.3	1.8	2.9	chr17	50448504	50448953	(32808488)	C	MER65A	LTR/ERV1	(0)	445	1	1631806
239	20.4	5.0	9.6	chr17	50448989	50449008	(32808433)	C	L1MD3	LINE/L1	(2064)	5931	5910	1631807
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
276	25.0	3.5	3.5	chr17	51153888	51153974	(32103467)	+	L2c	LINE/L2	3299	3385	(2)	1633249
200	15.4	9.3	2.5	chr17	51153987	51154026	(32103415)	C	L2b	LINE/L2	(2)	3373	3331	1633250
12	21.0	5.9	1.9	chr17	51166774	51166824	(32090617)	+	(CGCGCC)n	Simple_repeat	1	54	(0)	1633282
434	25.9	9.0	4.0	chr17	51386561	51386761	(31870680)	C	MamGypLTR1c	LTR/Gypsy	(2)	801	590	1633676
14	20.8	1.8	5.4	chr17	56592518	56592572	(26664869)	+	(ACAGAC)n	Simple_repeat	1	56	(0)	1641533
525	30.0	10.5	12.5	chr17	58436618	58437306	(24820135)	+	LTR85b	LTR/Gypsy?	1	756	(28)	1644989
24041	6.5	0.9	0.2	chr17	58846271	58852395	(24405046)	C	L1PA5	LINE/L1	(1)	6153	4	1645910
1098	17.2	3.5	8.7	chr17	58852400	58852593	(24404848)	C	L1MB3	LINE/L1	(628)	5555	5373	1645908
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
1689	18.9	12.9	4.6	chr17	60553212	60553417	(22704024)	+	MLT1F1	LTR/ERVL-MaLR	97	334	(235)	1649514
2008	16.7	1.0	0.0	chr17	60553418	60553722	(22703719)	C	AluJb	SINE/Alu	(3)	309	2	1649515
1123	18.5	14.2	1.3	chr17	60557742	60558141	(22699300)	C	LTR18B	LTR/ERVL	(63)	551	1	1649526
525	16.1	0.0	0.0	chr17	60558142	60558222	(22699219)	+	FLAM_A	SINE/Alu	52	132	(10)	1649527
11	21.5	6.0	1.9	chr17	61412641	61412690	(21844751)	+	(AGGCAC)n	Simple_repeat	1	53	(0)	1651017
1662	13.3	9.6	3.9	chr17	62470549	62470833	(20786608)	C	AluJr4	SINE/Alu	(9)	303	1	1653055
181	31.1	5.1	2.6	chr17	62470836	62470911	(20786530)	+	L2c	LINE/L2	3279	3356	(31)	1653056
12	11.6	6.9	0.0	chr17	62470916	62470944	(20786497)	+	G-rich	Low_complexity	1	31	(0)	1653057
668	25.6	11.9	0.5	chr17	62471001	62471215	(20786226)	C	MIRb	SINE/MIR	(22)	240	1	1653058
13	16.0	2.7	2.6	chr17	62704029	62704065	(20553376)	+	G-rich	Low_complexity	1	38	(0)	1653549
225	36.8	11.7	5.1	chr17	62960356	62960887	(20296554)	C	L2	LINE/L2	(403)	3016	2445	1654036
462	28.5	9.9	2.9	chr17	63001909	63002114	(20255327)	C	L2a	LINE/L2	(0)	3426	3205	1654103
504	29.3	2.3	10.2	chr17	63002117	63002302	(20255139)	C	LTR16A1	LTR/ERVL	(184)	272	102	1654104
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
1183	28.0	4.5	7.1	chr17	64290994	64291581	(18965860)	C	LTR41B	LTR/ERVL	(186)	572	1	1656239
904	18.9	6.0	9.0	chr17	64291584	64291695	(18965746)	+	L1MEc	LINE/L1	801	921	(5479)	1656236
5284	23.0	2.9	5.1	chr17	65989265	65990253	(17267188)	+	L1M3f	LINE/L1	3219	4205	(3952)	1659528
1995	27.6	7.5	4.9	chr17	67855855	67856901	(15400540)	C	HAL1	LINE/L1	(985)	1522	446	1662974
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
1948	27.3	8.1	4.8	chr17	68213504	68214544	(15042897)	C	HAL1	LINE/L1	(985)	1522	446	1663758
1124	23.8	1.2	8.8	chr17	69323126	69323535	(13933906)	+	LTR24B	LTR/ERV1	163	532	(44)	1665534
725	28.6	5.5	2.8	chr17	71386116	71386467	(11870974)	C	LTR82B	LTR/ERVL	(38)	792	431	1668702
1132	23.7	12.6	3.6	chr17	72620355	72620801	(10636640)	C	MLT1H	LTR/ERVL-MaLR	(1)	548	56	1670703
265	27.1	10.1	8.9	chr17	73474271	73474416	(9783025)	C	MIRb	SINE/MIR	(75)	193	46	1672393
2760	20.6	4.0	0.4	chr17	74296518	74297068	(8960373)	C	L1M4	LINE/L1	(6943)	574	3	1673866
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
16	8.3	0.0	0.0	chr17	75182636	75182661	(8074780)	+	(GGGA)n	Simple_repeat	1	26	(0)	1675545
24	20.0	5.3	1.2	chr17	75896642	75896717	(7360724)	+	G-rich	Low_complexity	1	80	(0)	1676984
17	18.1	5.8	1.8	chr17	76501390	76501441	(6756000)	+	(GCG)n	Simple_repeat	1	55	(0)	1678147
258	33.3	1.4	2.8	chr17	78281256	78281400	(4976041)	C	MARNA	DNA/TcMar-Mariner	(235)	351	209	1681555
2479	8.7	0.0	0.0	chr17	79994412	79994723	(3262718)	C	AluSq10	SINE/Alu	(1)	312	1	1684261
4111	22.9	6.4	0.9	chr17	80114377	80116120	(3141321)	C	L1M4	LINE/L1	(234)	2843	1	1684478
1520	10.6	10.2	6.6	chr17	80147777	80148049	(3109392)	C	AluJb	SINE/Alu	(27)	285	2	1684530
12	22.6	4.2	2.0	chr17	81393862	81393909	(1863532)	+	(GGCC)n	Simple_repeat	1	50	(0)	1686225
181	29.6	0.0	0.0	chr17	81703790	81703843	(1553598)	+	MIR3	SINE/MIR	87	140	(68)	1686664
16	14.5	3.1	9.1	chr17	81917970	81917993	(1339448)	+	(GCGG)n	Simple_repeat	1	42	(24)	1686906
14	8.2	0.0	3.6	chr17	81917994	81918021	(1339420)	+	(GGCCG)n	Simple_repeat	1	28	(0)	1686907
16	14.5	3.1	9.1	chr17	81918022	81918033	(1339408)	+	(GCGG)n	Simple_repeat	43	66	(0)	1686906
14	15.3	2.6	2.6	chr17	81927140	81927177	(1330264)	+	G-rich	Low_complexity	1	39	(0)	1686915
293	28.4	8.4	0.0	chr17	81998661	81998801	(1258640)	C	L1M5	LINE/L1	(2399)	3747	3594	1687038
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
18	19.8	6.9	0.0	chr17	82098746	82098803	(1158638)	+	(CGCGG)n	Simple_repeat	1	62	(0)	1687137
664	0.0	0.0	0.0	chr17	82494721	82494792	(762649)	C	tRNA-Met-i	tRNA	(3)	72	1	1687730
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
334	22.8	14.0	8.9	chr17	82607573	82607707	(649734)	+	L1MEf	LINE/L1	1189	1331	(4869)	1687948
663	18.4	8.1	0.0	chr17	82607709	82607833	(649608)	+	Tigger4a	DNA/TcMar-Tigger	1	136	(100)	1687953
337	30.3	5.0	7.7	chr18	3280486	3280517	(77092768)	C	MIRc	SINE/MIR	(79)	189	168	1694086
2134	11.5	3.3	1.0	chr18	3280518	3280813	(77092472)	C	AluSz6	SINE/Alu	(9)	303	1	1694087
243	28.3	5.7	10.0	chr18	5575123	5575232	(74798053)	+	MIR3	SINE/MIR	38	142	(66)	1697419
2212	17.8	2.8	0.5	chr18	5575245	5575554	(74797731)	+	MSTB	LTR/ERVL-MaLR	1	320	(106)	1697420
2028	15.6	0.3	0.7	chr18	5806683	5806990	(74566295)	C	AluSx	SINE/Alu	(5)	307	1	1697720
3666	17.8	2.7	2.8	chr18	5806991	5807530	(74565755)	C	L1MB7	LINE/L1	(4676)	2191	1538	1697716
47	2.3	0.0	0.0	chr18	6121686	6121730	(74251555)	+	(GT)n	Simple_repeat	1	45	(0)	1698136
226	33.7	2.8	3.7	chr18	6121753	6121860	(74251425)	C	L3	LINE/CR1	(4)	4095	3989	1698137
555	32.9	7.8	0.8	chr18	6121977	6122215	(74251070)	+	MIRc	SINE/MIR	12	268	(0)	1698138
641	26.8	11.5	0.0	chr18	7876418	7876671	(72496614)	C	MLT1H	LTR/ERVL-MaLR	(19)	530	244	1700692
440	26.9	9.5	4.7	chr18	9096411	9096831	(71276454)	C	L1ME4a	LINE/L1	(0)	6124	5929	1702450
270	24.8	13.9	0.6	chr18	9096847	9097008	(71276277)	C	L1M5	LINE/L1	(531)	5593	5407	1702451
1208	26.9	9.5	0.7	chr18	9506693	9507115	(70866170)	C	L1ME2z	LINE/L1	(934)	5603	5140	1703167
866	21.0	2.9	9.2	chr18	9507125	9507386	(70865899)	C	L1ME2z	LINE/L1	(6349)	284	40	1703167
4512	19.0	8.7	2.5	chr18	9580956	9582090	(70791195)	+	L1M4b	LINE/L1	1147	2359	(4508)	1703282
628	21.1	11.3	5.1	chr18	11951548	11951762	(68421523)	+	LTR50	LTR/ERVL	1	230	(565)	1706652
710	24.7	9.6	3.5	chr18	11951806	11951984	(68421301)	+	LTR50	LTR/ERVL	430	618	(177)	1706652
1577	12.6	11.2	0.0	chr18	25033258	25033496	(55339789)	+	AluSg	SINE/Alu	1	269	(41)	1718847
571	23.2	20.8	6.9	chr18	34586206	34586524	(45786761)	+	MSTB2	LTR/ERVL-MaLR	1	375	(82)	1732141
647	26.9	12.5	1.6	chr18	36483681	36483922	(43889363)	C	LTR82B	LTR/ERVL	(474)	356	85	1734856
588	21.5	4.9	1.8	chr18	36483924	36484088	(43889197)	+	MER5A1	DNA/hAT-Charlie	1	182	(7)	1734857
22	0.0	0.0	0.0	chr18	43159355	43159378	(37213907)	+	(A)n	Simple_repeat	1	24	(0)	1743844
229	13.9	0.0	0.0	chr18	43159392	43159427	(37213858)	C	MER63D	DNA/hAT-Blackjack	(676)	385	350	1743845
542	31.2	6.4	4.0	chr18	47950398	47950671	(32422614)	C	MARNA	DNA/TcMar-Mariner	(233)	353	73	1751052
19	16.4	5.2	3.3	chr18	48976165	48976222	(31397063)	+	(GGC)n	Simple_repeat	1	61	(0)	1752763
12	8.1	8.9	6.1	chr18	48976314	48976358	(31396927)	+	(CCGCGG)n	Simple_repeat	1	49	(0)	1752764
265	35.0	6.7	1.4	chr18	49284216	49284357	(31088928)	C	MIR	SINE/MIR	(27)	235	86	1753239
603	36.8	3.1	0.4	chr18	49284488	49284741	(31088544)	C	MIRb	SINE/MIR	(1)	267	7	1753240
1490	9.2	0.0	0.0	chr18	49454030	49454225	(30919060)	+	HUERS-P3-int	LTR/ERV1	8723	8918	(1)	1753555
2688	15.4	7.9	1.8	chr18	49454229	49454617	(30918668)	+	LTR9	LTR/ERV1	1	424	(188)	1753555
844	19.4	1.7	0.0	chr18	50696999	50697168	(29676117)	+	MER5A	DNA/hAT-Charlie	17	189	(0)	1755581
301	29.0	13.3	9.4	chr18	50697175	50697418	(29675867)	+	MIR	SINE/MIR	3	257	(5)	1755582
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
14	4.0	7.7	0.0	chr18	54776099	54776124	(25597161)	+	(TGT)n	Simple_repeat	1	28	(0)	1761746
12	13.3	2.7	5.3	chr18	57083722	57083758	(23289527)	+	(GTTAGCA)n	Simple_repeat	1	38	(0)	1765024
7815	16.6	7.0	2.8	chr18	58586321	58587832	(21785453)	+	L1M4	LINE/L1	22	1601	(5916)	1767481
251	30.9	3.5	5.1	chr18	59053375	59053551	(21319734)	C	L1ME4c	LINE/L1	(93)	737	564	1768360
902	28.3	4.2	0.5	chr18	59053555	59053848	(21319437)	C	L1ME4c	LINE/L1	(305)	525	256	1768361
3182	7.9	0.7	4.2	chr18	63452219	63452611	(16920674)	C	LTR71B	LTR/ERV1	(175)	435	58	1775108
4301	26.0	4.6	6.4	chr18	66620735	66622054	(13751231)	C	L1M4b	LINE/L1	(4418)	2449	1130	1779370
261	36.4	6.9	1.1	chr18	70311070	70311247	(10062038)	+	L2c	LINE/L2	3144	3332	(55)	1784382
3700	24.2	11.9	2.9	chr18	76133395	76134256	(4239029)	C	L1M4	LINE/L1	(6573)	944	16	1791836
4652	23.6	9.9	2.1	chr18	79861579	79863131	(510154)	C	L1MB7	LINE/L1	(5782)	1838	19	1795843
251	31.4	1.1	1.1	chr18	79863149	79863235	(510050)	C	MER5A1	DNA/hAT-Charlie	(79)	87	1	1795848
8904	20.6	10.6	2.4	chr18	79928455	79931730	(441555)	+	L1M4b	LINE/L1	12	3635	(3371)	1795900
1289	22.4	17.3	0.2	chr18	80210221	80210623	(162662)	+	L1M4	LINE/L1	15	500	(7017)	1796275
1640	23.4	2.6	5.2	chr19	998078	998423	(57619193)	+	L1MB3	LINE/L1	5829	6179	(4)	1798042
198	31.4	6.4	1.9	chr19	998452	998555	(57619061)	C	MIR	SINE/MIR	(72)	190	82	1798048
13	14.3	3.0	2.9	chr19	1020920	1020952	(57596664)	+	(CCG)n	Simple_repeat	1	34	(0)	1798079
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
23	20.5	6.2	1.2	chr19	1026576	1026655	(57590961)	+	(CCCGT)n	Simple_repeat	1	85	(0)	1798100
18	22.9	2.3	6.7	chr19	1026656	1026661	(57590955)	+	(GCCC)n	Simple_repeat	2	89	(0)	1798101
24	14.8	1.9	1.8	chr19	1275563	1275616	(57342000)	+	(TGCTGC)n	Simple_repeat	1	55	(0)	1798487
350	27.7	4.7	0.0	chr19	1406997	1407097	(57210519)	+	MIR	SINE/MIR	43	148	(114)	1798746
22	10.7	8.0	0.0	chr19	1407283	1407349	(57210267)	+	(CGCA)n	Simple_repeat	1	72	(0)	1798747
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
12	16.0	2.0	8.0	chr19	1491524	1491572	(57126044)	+	(CGCCCG)n	Simple_repeat	1	50	(0)	1798868
29	2.6	5.1	0.0	chr19	1592382	1592420	(57025196)	+	(CACG)n	Simple_repeat	1	41	(0)	1799091
15	21.8	0.0	5.7	chr19	1592422	1592474	(57025142)	+	G-rich	Low_complexity	1	53	(0)	1799092
381	26.3	10.4	3.7	chr19	1668203	1668443	(56949173)	C	HAL1b	LINE/L1	(1250)	1171	913	1799244
1620	24.9	5.0	2.4	chr19	2106575	2106926	(56510690)	+	L1MB3	LINE/L1	5659	6024	(159)	1800157
2362	8.1	1.0	0.0	chr19	2106982	2107276	(56510340)	+	AluY	SINE/Alu	1	298	(13)	1800159
21	19.8	0.0	0.0	chr19	2163757	2163802	(56453814)	+	(CGTG)n	Simple_repeat	1	46	(0)	1800272
17	27.5	1.3	4.0	chr19	2163789	2163863	(56453753)	+	G-rich	Low_complexity	1	76	(0)	1800273
20	22.1	5.9	0.0	chr19	2164004	2164030	(56453586)	+	(GAGGCC)n	Simple_repeat	1	56	(16)	1800274
384	21.4	8.5	6.2	chr19	2268873	2269066	(56348550)	+	MER97a	DNA/hAT-Tip100	627	825	(65)	1800443
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
559	25.5	5.4	0.0	chr19	2675705	2675861	(55941755)	+	MER20	DNA/hAT-Charlie	52	217	(2)	1801409
1737	16.2	0.3	5.0	chr19	2835810	2836130	(55781486)	C	AluJo	SINE/Alu	(0)	312	7	1801749
24	16.1	6.5	0.0	chr19	3185963	3186024	(55431592)	+	(CCG)n	Simple_repeat	1	66	(0)	1802594
13	19.1	2.6	2.6	chr19	3186112	3186149	(55431467)	+	(GCT)n	Simple_repeat	1	39	(0)	1802595
15	8.1	0.0	3.6	chr19	3186131	3186158	(55431458)	+	(CGC)n	Simple_repeat	1	28	(0)	1802596
18	23.8	1.8	1.8	chr19	4402651	4402706	(54214910)	+	(GCG)n	Simple_repeat	1	57	(0)	1805516
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
605	5.5	0.0	0.0	chr19	4724635	4724707	(53892909)	C	tRNA-Val-GTG	tRNA	(3)	73	1	1806266
1019	17.0	16.9	2.4	chr19	4956231	4956364	(53661252)	C	AluJr	SINE/Alu	(179)	133	1	1806967
186	38.4	6.4	2.0	chr19	4956490	4956638	(53660978)	+	MIR	SINE/MIR	59	214	(48)	1806969
379	31.3	11.9	5.0	chr19	5642966	5643144	(52974472)	C	MIR	SINE/MIR	(61)	201	3	1808512
2090	10.1	1.1	0.0	chr19	6280458	6280735	(52336881)	C	AluSz6	SINE/Alu	(6)	306	26	1809798
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
297	29.2	0.0	3.2	chr19	8005998	8006113	(50611503)	+	MIRc	SINE/MIR	47	155	(53)	1814132
1896	15.3	0.0	4.5	chr19	10039788	10039932	(48577684)	+	AluJb	SINE/Alu	3	143	(169)	1818746
284	33.0	19.6	2.0	chr19	10228987	10229283	(48388333)	+	L2a	LINE/L2	2720	3081	(338)	1819214
2301	10.5	0.0	0.0	chr19	10229296	10229589	(48388027)	C	AluSx1	SINE/Alu	(18)	294	1	1819215
414	23.2	0.0	1.2	chr19	10269474	10269556	(48348060)	+	L2a	LINE/L2	3329	3410	(16)	1819330
317	32.5	5.5	6.1	chr19	10864496	10864823	(47752793)	C	L2b	LINE/L2	(528)	2891	2566	1820864
2090	13.7	0.3	0.6	chr19	10976773	10977085	(47640531)	+	AluSx	SINE/Alu	1	312	(0)	1821162
236	26.9	0.0	0.0	chr19	11344712	11344763	(47272853)	+	MER91A	DNA/hAT-Tip100	1	52	(144)	1822104
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
37	25.8	2.8	5.5	chr19	12838391	12838437	(45779179)	+	(CGC)n	Simple_repeat	1	56	(127)	1825335
15	11.6	0.0	0.0	chr19	12838438	12838465	(45779151)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1825336
37	25.8	2.8	5.5	chr19	12838466	12838568	(45779048)	+	(CGC)n	Simple_repeat	57	183	(0)	1825335
675	29.8	4.2	8.7	chr19	13279310	13279482	(45338134)	+	L1ME3B	LINE/L1	5386	5561	(681)	1826318
1662	20.7	8.0	2.0	chr19	14525363	14525806	(44091810)	+	L1ME1	LINE/L1	5692	6164	(15)	1829718
209	15.2	0.0	0.0	chr19	16112219	16112251	(42505365)	C	MIRc	SINE/MIR	(120)	148	116	1833150
29	24.8	2.8	6.1	chr19	16471766	16471909	(42145707)	+	(CCGC)n	Simple_repeat	1	148	(0)	1833998
553	15.4	18.2	16.9	chr19	17050420	17050499	(41567117)	+	MSTC	LTR/ERVL-MaLR	1	54	(374)	1835384
1670	16.4	0.4	2.5	chr19	17050500	17050615	(41567001)	+	AluSz6	SINE/Alu	23	134	(178)	1835385
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
15	36.9	0.0	2.3	chr19	17555736	17555748	(41061868)	+	(GCC)n	Simple_repeat	1	26	(60)	1836688
15	28.4	0.0	0.0	chr19	17555749	17555795	(41061821)	+	(GCT)n	Simple_repeat	1	47	(0)	1836689
15	36.9	0.0	2.3	chr19	17555796	17555821	(41061795)	+	(GCC)n	Simple_repeat	27	86	(0)	1836688
196	15.6	0.0	0.0	chr19	18340441	18340472	(40277144)	C	MIR1_Amn	SINE/MIR	(76)	154	123	1838667
2154	14.1	0.0	0.3	chr19	18365338	18365643	(40251973)	C	AluJb	SINE/Alu	(7)	305	1	1838731
217	26.3	4.8	9.2	chr19	18417406	18417514	(40200102)	+	MIRc	SINE/MIR	23	126	(142)	1838867
230	24.4	0.0	0.0	chr19	18429973	18430017	(40187599)	+	MIRc	SINE/MIR	84	128	(140)	1838881
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
2366	10.0	0.3	0.6	chr19	19598285	19598595	(39019021)	C	AluSg	SINE/Alu	(0)	310	1	1841256
234	21.9	4.5	0.0	chr19	19598596	19598609	(39019007)	+	L1MC4a	LINE/L1	6298	6313	(31)	1841250
19158	17.3	2.1	2.4	chr19	27842327	27846463	(30771153)	C	HERVFH21-int	LTR/ERV1	(2407)	4122	70	1847995
1030	24.4	4.4	1.6	chr19	27922122	27922433	(30695183)	+	MER46C	DNA/TcMar-Tigger	1	321	(17)	1848066
3046	18.8	3.0	1.0	chr19	28168385	28168971	(30448645)	+	MER73	LTR/ERVL	1	599	(45)	1848374
1228	14.0	14.2	1.7	chr19	28245820	28246102	(30371514)	+	L1MA9	LINE/L1	5852	6174	(138)	1848474
3214	15.7	4.2	2.8	chr19	28246105	28246765	(30370851)	C	L1MA9	LINE/L1	(424)	5888	5209	1848475
3541	19.7	10.4	3.0	chr19	28322042	28322863	(30294753)	+	L1M4	LINE/L1	7	902	(6615)	1848585
947	14.4	11.7	0.0	chr19	28425600	28425780	(30191836)	C	Tigger1a_Art	DNA/TcMar-Tigger	(3)	494	290	1848750
704	21.2	9.1	0.6	chr19	28425767	28425927	(30191689)	C	Tigger1a_Art	DNA/TcMar-Tigger	(321)	176	1	1848750
1463	27.7	1.6	2.5	chr19	28425930	28426077	(30191539)	+	MLT1C	LTR/ERVL-MaLR	38	184	(283)	1848751
13	31.8	0.0	1.8	chr19	29526522	29526578	(29091038)	+	(GCCCCC)n	Simple_repeat	1	57	(0)	1850369
14	14.1	4.7	4.4	chr19	29812487	29812529	(28805087)	+	(CCG)n	Simple_repeat	1	45	(0)	1850909
28	0.0	0.0	0.0	chr19	29812602	29812628	(28804988)	+	(GGACG)n	Simple_repeat	1	27	(0)	1850910
892	17.4	7.5	5.3	chr19	29872814	29873020	(28744596)	C	L1PA16	LINE/L1	(9)	6157	5946	1851043
2524	8.1	0.0	0.0	chr19	30084800	30085106	(28532510)	C	AluSq	SINE/Alu	(6)	307	1	1851366
12	11.5	10.0	2.3	chr19	30227662	30227701	(28389915)	+	(GCGA)n	Simple_repeat	1	44	(0)	1851577
19	4.0	0.0	0.0	chr19	30227737	30227762	(28389854)	+	(GCC)n	Simple_repeat	1	26	(0)	1851578
2632	9.6	0.3	0.3	chr19	30251589	30251955	(28365661)	C	L1PB1	LINE/L1	(3)	6148	5782	1851614
1698	6.7	1.2	0.9	chr19	30251964	30252302	(28365314)	+	L1PB	LINE/L1	5157	5491	(660)	1851615
16	26.5	3.1	1.5	chr19	31349883	31349894	(27267722)	+	(CCCGCC)n	Simple_repeat	1	24	(43)	1853082
14	16.1	2.9	0.0	chr19	31349895	31349929	(27267687)	+	(GGCCCCC)n	Simple_repeat	1	36	(0)	1853083
353	34.5	4.6	0.0	chr19	32363965	32364109	(26253507)	+	MIRb	SINE/MIR	94	245	(23)	1854663
13	21.4	3.9	3.7	chr19	32405916	32405967	(26211649)	+	(GGCG)n	Simple_repeat	1	54	(0)	1854737
13	14.1	3.0	2.9	chr19	32692046	32692078	(25925538)	+	(CCG)n	Simple_repeat	1	34	(0)	1855320
2381	8.8	0.3	0.0	chr19	32710612	32710905	(25906711)	+	AluSp	SINE/Alu	1	295	(18)	1855349
1867	13.3	0.0	0.0	chr19	33133266	33133513	(25484103)	+	AluSz	SINE/Alu	1	248	(64)	1856250
301	18.9	7.8	7.8	chr19	33133514	33133536	(25484080)	+	L1MEg	LINE/L1	1921	1943	(4141)	1856247
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
191	28.8	4.3	12.6	chr19	33370271	33370397	(25247219)	+	L2a	LINE/L2	2842	2957	(462)	1856699
19	26.0	1.4	4.0	chr19	33373697	33373770	(25243846)	+	(GGC)n	Simple_repeat	1	75	(0)	1856707
762	22.5	5.8	1.1	chr19	33376442	33376621	(25240995)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1856710
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
222	31.6	11.4	4.1	chr19	33778034	33778155	(24839461)	C	MIR	SINE/MIR	(117)	145	14	1857292
4783	22.3	9.2	10.4	chr19	33897797	33898859	(24718757)	C	L1MEg	LINE/L1	(4442)	1800	806	1857505
2288	5.3	0.0	2.1	chr19	34047768	34048051	(24569565)	C	AluYc	SINE/Alu	(21)	278	1	1857771
2108	19.6	6.7	2.8	chr19	34048052	34048402	(24569214)	+	L1M4	LINE/L1	76	450	(7067)	1857770
2018	22.1	2.8	1.4	chr19	34295039	34295460	(24322156)	C	L1M4	LINE/L1	(7081)	436	9	1858357
2110	12.9	0.7	0.7	chr19	34474420	34474714	(24142902)	+	AluSz	SINE/Alu	1	295	(17)	1858717
13	24.2	4.0	1.0	chr19	34474715	34474782	(24142834)	+	A-rich	Low_complexity	1	70	(0)	1858718
14	31.3	1.1	5.2	chr19	34482451	34482545	(24135071)	+	(CCTGCCC)n	Simple_repeat	1	96	(0)	1858734
1966	13.0	0.3	6.0	chr19	34482993	34483323	(24134293)	C	AluJb	SINE/Alu	(0)	312	1	1858736
13	15.9	2.6	2.6	chr19	34483324	34483338	(24134278)	+	(TTC)n	Simple_repeat	1	16	(0)	1858737
4059	11.4	0.5	2.1	chr19	34655092	34655711	(23961905)	+	MER4B	LTR/ERV1	1	610	(0)	1858959
522	27.1	8.0	1.8	chr19	34655712	34655857	(23961759)	C	LTR33	LTR/ERVL	(74)	441	279	1858958
1845	19.5	12.3	1.2	chr19	34688550	34689031	(23928585)	C	MER67A	LTR/ERV1	(0)	543	1	1859002
11	13.2	5.7	2.7	chr19	34772894	34772928	(23844688)	+	G-rich	Low_complexity	1	37	(0)	1859111
2493	12.9	0.5	0.8	chr19	34885099	34885465	(23732151)	C	THE1C	LTR/ERVL-MaLR	(0)	375	10	1859272
3269	23.3	8.0	1.1	chr19	34885466	34885599	(23732017)	+	L1MB4	LINE/L1	1763	1900	(5720)	1859269
243	31.6	6.5	2.0	chr19	34999501	34999657	(23617959)	+	MIRb	SINE/MIR	8	168	(100)	1859479
489	29.4	9.2	2.7	chr19	35029573	35029907	(23587709)	C	L2a	LINE/L2	(158)	3268	2910	1859546
307	21.7	13.2	1.1	chr19	35455766	35455858	(23161758)	C	MIRb	SINE/MIR	(144)	124	19	1860448
1323	10.8	0.0	0.0	chr19	35455907	35456073	(23161543)	C	AluSx1	SINE/Alu	(11)	301	135	1860449
12	14.6	0.0	5.9	chr19	35545823	35545856	(23071760)	+	G-rich	Low_complexity	1	34	(0)	1860636
2043	11.6	0.0	6.3	chr19	35660162	35660480	(22957136)	+	AluSx3	SINE/Alu	1	299	(12)	1860880
25	21.7	2.3	4.5	chr19	35717916	35718005	(22899611)	+	(GCCCC)n	Simple_repeat	1	88	(0)	1861037
2515	7.8	0.3	0.0	chr19	35828255	35828563	(22789053)	C	AluSx3	SINE/Alu	(1)	310	1	1861261
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
19	29.6	1.1	3.4	chr19	35868644	35868686	(22748930)	+	(CCGCTG)n	Simple_repeat	1	74	(20)	1861338
19	22.0	0.0	0.0	chr19	35868687	35868730	(22748886)	+	(GCT)n	Simple_repeat	1	44	(0)	1861339
19	29.6	1.1	3.4	chr19	35868731	35868740	(22748876)	+	(CCGCTG)n	Simple_repeat	75	94	(0)	1861338
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
190	32.6	6.9	1.0	chr19	36978718	36978813	(21638803)	+	L2c	LINE/L2	2934	3035	(352)	1863637
371	27.8	4.7	3.6	chr19	37258469	37258636	(21358980)	C	L1M5	LINE/L1	(3170)	2976	2807	1864132
1357	14.1	0.0	3.3	chr19	37491068	37491280	(21126336)	+	AluJb	SINE/Alu	1	206	(106)	1864523
1295	11.5	4.4	0.0	chr19	37491282	37491499	(21126117)	+	THE1D	LTR/ERVL-MaLR	92	319	(62)	1864524
312	32.2	10.0	3.8	chr19	37907541	37907884	(20709732)	+	MIRb	SINE/MIR	1	266	(2)	1865342
1748	14.8	1.7	3.4	chr19	38238628	38238925	(20378691)	+	AluJb	SINE/Alu	1	293	(19)	1866187
2250	11.9	0.7	0.0	chr19	38239600	38239902	(20377714)	+	AluSp	SINE/Alu	2	306	(7)	1866190
606	29.4	15.0	12.1	chr19	38239903	38240294	(20377322)	C	L2a	LINE/L2	(1314)	2105	1654	1866162
511	28.2	19.0	1.4	chr19	38682821	38683101	(19934515)	+	L2a	LINE/L2	3084	3425	(1)	1867245
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
2506	14.7	0.5	0.7	chr19	38862477	38862887	(19754729)	C	LTR35A	LTR/ERV1	(0)	547	138	1867607
603	29.6	6.3	1.3	chr19	39125237	39125462	(19492154)	+	MIRb	SINE/MIR	17	254	(14)	1868332
374	30.9	8.7	0.0	chr19	39128140	39128265	(19489351)	+	MIR	SINE/MIR	118	255	(7)	1868337
14	0.0	0.0	0.0	chr19	39128268	39128285	(19489331)	+	(TGC)n	Simple_repeat	1	18	(0)	1868338
813	24.5	2.5	0.0	chr19	39130983	39131178	(19486438)	C	MIR	SINE/MIR	(33)	229	29	1868348
11	14.8	4.9	4.7	chr19	39320618	39320658	(19296958)	+	G-rich	Low_complexity	1	43	(0)	1868832
22	25.6	4.1	2.9	chr19	39320668	39320765	(19296851)	+	(CGCA)n	Simple_repeat	1	102	(0)	1868833
17	27.4	2.2	5.3	chr19	39409702	39409793	(19207823)	+	G-rich	Low_complexity	1	94	(0)	1869013
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
2162	11.5	1.0	1.9	chr19	39427921	39428234	(19189382)	+	AluSx1	SINE/Alu	1	311	(1)	1869043
232	29.1	11.3	0.0	chr19	39428236	39428321	(19189295)	C	L2a	LINE/L2	(28)	3398	3302	1869044
1721	15.0	0.7	1.4	chr19	39533885	39534177	(19083439)	+	AluJo	SINE/Alu	1	291	(21)	1869295
270	28.1	4.6	4.6	chr19	39996743	39996850	(18620766)	C	L2c	LINE/L2	(0)	3387	3280	1870082
12	20.0	0.0	2.8	chr19	40191451	40191486	(18426130)	+	G-rich	Low_complexity	1	36	(0)	1870440
187	28.1	9.9	0.0	chr19	40192856	40192919	(18424697)	C	MIRb	SINE/MIR	(97)	171	101	1870442
214	25.5	0.0	0.0	chr19	40192988	40193034	(18424582)	C	L2b	LINE/L2	(76)	3299	3253	1870443
1256	16.0	2.8	3.2	chr19	40193090	40193308	(18424308)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1870444
12	27.7	0.0	0.0	chr19	40222398	40222436	(18395180)	+	(GCGGC)n	Simple_repeat	1	39	(0)	1870527
24	10.9	0.0	0.0	chr19	40285268	40285307	(18332309)	+	(CGGCAG)n	Simple_repeat	1	40	(0)	1870651
375	27.3	4.8	2.8	chr19	40356763	40356905	(18260711)	C	L2b	LINE/L2	(447)	2972	2827	1870860
13	20.6	4.9	4.7	chr19	40570594	40570654	(18046962)	+	(CCGGCC)n	Simple_repeat	1	64	(0)	1871443
225	25.8	2.2	3.9	chr19	40599012	40599088	(18018528)	C	MIR3	SINE/MIR	(49)	159	79	1871500
12	11.0	2.9	5.7	chr19	40602488	40602521	(18015095)	+	(GCCCA)n	Simple_repeat	1	35	(0)	1871503
16	25.4	6.6	1.2	chr19	40717230	40717305	(17900311)	+	(GGC)n	Simple_repeat	1	81	(0)	1871779
355	37.9	1.8	1.2	chr19	40802496	40802658	(17814958)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	4	1871998
1626	23.0	6.7	2.0	chr19	41501466	41501864	(17115752)	+	L1PA12	LINE/L1	88	506	(6475)	1873535
726	18.8	4.1	2.9	chr19	41668000	41668169	(16949447)	+	MER21B	LTR/ERVL	690	861	(7)	1873723
13	15.4	0.0	3.2	chr19	42284093	42284123	(16333493)	+	(GCAC)n	Simple_repeat	1	31	(0)	1874957
17	23.3	0.0	0.0	chr19	42284254	42284298	(16333318)	+	GA-rich	Low_complexity	1	45	(0)	1874958
20	12.0	6.9	3.2	chr19	42284301	42284358	(16333258)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1874959
22	12.0	4.4	0.0	chr19	42313328	42313372	(16304244)	+	(GCCGGA)n	Simple_repeat	1	47	(0)	1875003
19	11.5	2.5	2.4	chr19	42313400	42313439	(16304177)	+	(GCT)n	Simple_repeat	1	41	(0)	1875004
355	33.5	4.0	1.2	chr19	43370487	43370655	(15246961)	+	ERVL-E-int	LTR/ERVL	5125	5298	(416)	1876594
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
13	16.5	0.0	8.3	chr19	43639541	43639588	(14978028)	+	(GCCCCC)n	Simple_repeat	1	48	(0)	1877297
1296	15.0	16.6	6.2	chr19	43647834	43648180	(14969436)	C	LTR19A	LTR/ERV1	(18)	468	71	1877317
950	30.0	6.7	0.8	chr19	43691838	43692190	(14925426)	+	L1MEd	LINE/L1	561	935	(6151)	1877446
4359	15.9	4.5	0.1	chr19	43898240	43899068	(14718548)	+	L1MB8	LINE/L1	5312	6178	(0)	1877879
20615	10.9	2.4	2.1	chr19	43969649	43974758	(14642858)	+	L1PA11	LINE/L1	1808	6915	(694)	1877994
275	35.3	3.8	4.3	chr19	44003235	44003444	(14614172)	+	MIRb	SINE/MIR	28	236	(26)	1878041
1348	20.7	1.9	0.8	chr19	44164479	44164746	(14452870)	C	MLT1A0	LTR/ERVL-MaLR	(94)	271	1	1878309
649	28.0	4.0	0.0	chr19	44166745	44166912	(14450704)	+	MER5A	DNA/hAT-Charlie	9	183	(6)	1878313
959	31.3	5.9	3.5	chr19	44229873	44230008	(14387608)	+	L2a	LINE/L2	2660	2798	(621)	1878413
2011	17.0	0.3	0.7	chr19	44230009	44230314	(14387302)	C	AluJr	SINE/Alu	(7)	305	1	1878414
2104	13.7	7.7	2.0	chr19	45608980	45609322	(13008294)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1881767
3697	14.1	5.8	0.2	chr19	46147246	46147814	(12469802)	+	LTR71B	LTR/ERV1	8	610	(0)	1883019
572	25.8	7.8	2.6	chr19	46389573	46389767	(12227849)	C	L1MC5	LINE/L1	(421)	8883	8678	1883530
12	29.1	0.0	6.9	chr19	46389807	46389878	(12227738)	+	(CCCTCC)n	Simple_repeat	1	72	(0)	1883533
17	30.2	0.0	2.8	chr19	46746300	46746371	(11871245)	+	G-rich	Low_complexity	1	72	(0)	1884426
467	26.8	3.1	2.5	chr19	46784208	46784368	(11833248)	C	MIR	SINE/MIR	(24)	238	77	1884535
1052	20.7	5.1	1.3	chr19	47263271	47263531	(11354085)	C	MER68	LTR/ERVL	(22)	582	248	1885693
504	29.0	8.9	1.0	chr19	48539660	48539853	(10077763)	+	MIR	SINE/MIR	51	252	(10)	1889000
391	33.1	5.3	0.0	chr19	48618825	48618966	(9998650)	+	MIR	SINE/MIR	2	151	(111)	1889229
294	20.7	2.7	2.5	chr19	49157903	49158099	(9459517)	C	MSR1	Satellite	(0)	197	1	1890486
13	19.8	0.0	2.7	chr19	49361581	49361617	(9255999)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1890948
29	0.0	0.0	0.0	chr19	49591791	49591818	(9025798)	+	(GCCGG)n	Simple_repeat	1	28	(0)	1891492
190	28.1	5.9	0.0	chr19	50698543	50698606	(7919010)	C	L2c	LINE/L2	(7)	3380	3313	1894116
605	27.7	1.2	0.6	chr19	50698645	50698804	(7918812)	C	MIR	SINE/MIR	(89)	173	13	1894117
2392	10.0	0.7	0.3	chr19	52032436	52032734	(6584882)	C	AluSp	SINE/Alu	(12)	301	2	1896670
229	27.8	8.5	1.0	chr19	55280603	55280700	(3336916)	+	MIR3	SINE/MIR	41	146	(62)	1903375
2451	8.1	0.0	0.7	chr19	55335036	55335345	(3282271)	+	AluSg7	SINE/Alu	2	309	(0)	1903523
14	17.5	5.3	5.0	chr19	55335346	55335370	(3282246)	+	(TACAG)n	Simple_repeat	3	27	(0)	1903524
2360	8.8	0.0	3.1	chr19	55335371	55335690	(3281926)	+	AluY	SINE/Alu	1	310	(1)	1903525
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
15	10.4	3.0	2.9	chr19	55675287	55675319	(2942297)	+	(GGC)n	Simple_repeat	1	34	(0)	1904272
12	25.8	0.0	0.0	chr19	55675311	55675347	(2942269)	+	(GCGT)n	Simple_repeat	1	37	(0)	1904273
17	25.8	2.9	6.5	chr19	55675563	55675587	(2942029)	+	(CCTGTG)n	Simple_repeat	1	49	(59)	1904274
195	32.5	0.5	3.8	chr19	57322834	57322964	(1294652)	C	MIR1_Amn	SINE/MIR	(96)	134	6	1907616
21	19.9	0.0	0.0	chr19	57323022	57323067	(1294549)	+	(TGT)n	Simple_repeat	1	46	(0)	1907617
1457	21.2	11.9	1.7	chr19	57430121	57430475	(1187141)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1907793
2256	24.6	5.1	7.8	chr19	57430476	57430759	(1186857)	C	MER89-int	LTR/ERV1	(5435)	1366	1089	1907788
31543	14.0	4.2	2.1	chr19	57564659	57567399	(1050217)	C	LTR25-int	LTR/ERV1	(3703)	3485	633	1907989
326	16.1	0.0	0.0	chr19	57635133	57635188	(982428)	C	tRNA-Asn-AAC	tRNA	(21)	56	1	1908079
5802	18.9	7.8	6.9	chr19	57635238	57637424	(980192)	C	L1MB3	LINE/L1	(2)	6417	4079	1908080
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
412	33.2	10.4	2.7	chr19	58304721	58305020	(312596)	+	L1MC4a	LINE/L1	7489	7814	(68)	1909307
2448	21.6	4.7	3.4	chr2	3509031	3509743	(238683786)	+	L1MCa	LINE/L1	2492	3214	(3107)	1914551
1309	24.3	6.0	0.3	chr2	7891272	7891601	(234301928)	+	L1M4	LINE/L1	2	351	(7166)	1920584
251	32.7	2.9	1.0	chr2	10599790	10599891	(231593638)	C	MIR3	SINE/MIR	(54)	154	51	1925038
298	37.1	6.2	1.4	chr2	11655450	11655662	(230537867)	+	MIR	SINE/MIR	2	225	(37)	1927037
370	32.7	15.8	4.0	chr2	11856068	11856277	(230337252)	C	L2	LINE/L2	(787)	2632	2391	1927358
225	21.1	1.7	8.1	chr2	11856288	11856349	(230337180)	C	L2-3_Crp	LINE/L2	(1281)	815	758	1927360
3333	10.6	1.0	1.2	chr2	17856479	17856916	(224336613)	C	L1PB2	LINE/L1	(46)	6105	5664	1936628
627	27.5	13.9	3.7	chr2	18855792	18856086	(223337443)	+	L2a	LINE/L2	3075	3404	(22)	1938027
1208	21.9	8.5	4.1	chr2	19409290	19409819	(222783710)	+	L1MEa	LINE/L1	694	1317	(4925)	1938768
714	30.1	5.0	4.2	chr2	19409841	19410336	(222783193)	+	L1MEa	LINE/L1	2542	3041	(3105)	1938768
180	28.6	9.1	0.0	chr2	23669330	23669399	(218524130)	C	L2b	LINE/L2	(261)	3126	3050	1944674
200	23.2	13.7	2.4	chr2	23669498	23669581	(218523948)	+	L2b	LINE/L2	3265	3359	(16)	1944675
13	22.7	0.0	0.0	chr2	25342311	25342346	(216851183)	+	G-rich	Low_complexity	1	36	(0)	1947760
231	33.1	4.7	3.2	chr2	26055075	26055199	(216138330)	C	L2a	LINE/L2	(3)	3423	3297	1949237
866	32.5	7.6	2.7	chr2	27561998	27562309	(214631220)	C	L1MEd	LINE/L1	(1220)	4926	4582	1952054
1409	14.0	3.2	0.9	chr2	27562320	27562533	(214630996)	+	AluJb	SINE/Alu	87	305	(7)	1952056
11580	10.7	2.0	2.2	chr2	27881577	27883106	(214310423)	+	L1PREC2	LINE/L1	4652	6158	(2)	1952670
388	9.1	0.0	0.0	chr2	27883108	27883162	(214310367)	+	MSTB2	LTR/ERVL-MaLR	403	457	(0)	1952674
2630	6.0	0.0	0.0	chr2	27883198	27883498	(214310031)	C	AluYj4	SINE/Alu	(10)	301	1	1952675
924	23.0	8.8	7.2	chr2	28511414	28511519	(213682010)	C	L1MEg	LINE/L1	(4479)	1605	1498	1953691
4017	21.9	10.0	4.7	chr2	28511518	28511781	(213681748)	C	L1M4a1	LINE/L1	(827)	1752	1508	1953695
22509	11.1	1.7	1.2	chr2	37956657	37963165	(204230364)	C	L1PA7	LINE/L1	(0)	6469	2	1968511
305	38.2	13.7	2.1	chr2	45551641	45552014	(196641515)	C	L2	LINE/L2	(338)	3081	2658	1980867
457	32.5	7.3	4.1	chr2	46696878	46697160	(195496369)	C	L2c	LINE/L2	(4)	3383	3073	1982665
579	25.8	12.0	2.1	chr2	46697183	46697376	(195496153)	+	L2a	LINE/L2	3211	3426	(0)	1982666
251	35.9	13.9	4.2	chr2	46697331	46698084	(195495445)	C	L2c	LINE/L2	(663)	2756	1918	1982665
554	21.2	12.2	4.6	chr2	46983655	46983827	(195209702)	+	MER58A	DNA/hAT-Charlie	37	224	(0)	1983198
1798	18.2	1.0	1.0	chr2	47825556	47825876	(194367653)	C	AluJb	SINE/Alu	(0)	312	1	1984870
195	37.6	3.6	2.9	chr2	47845869	47846005	(194347524)	+	L2	LINE/L2	1491	1628	(1791)	1984913
1809	28.9	4.8	2.1	chr2	52060856	52061420	(190132109)	C	L1M4b	LINE/L1	(6280)	587	7	1990823
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
1571	25.5	0.6	0.3	chr2	59538302	59538643	(182654886)	+	L1M4	LINE/L1	4	346	(7171)	2001245
334	34.4	8.2	1.9	chr2	62036260	62036475	(180157054)	C	MIRc	SINE/MIR	(35)	233	3	2005721
864	29.8	13.0	1.0	chr2	66365829	66366559	(175826970)	+	L1ME5	LINE/L1	5338	6190	(4)	2012700
1050	23.6	18.5	6.7	chr2	67234155	67234766	(174958763)	C	LTR41C	LTR/ERVL	(0)	701	1	2013795
490	29.0	9.7	5.9	chr2	68077210	68077495	(174116034)	+	MLT1H	LTR/ERVL-MaLR	35	332	(217)	2014997
1550	19.8	4.4	6.3	chr2	68077613	68078010	(174115519)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2014998
303	31.5	9.6	4.6	chr2	69588521	69588846	(172604683)	C	Mam_R4	LINE/Dong-R4	(113)	3696	3353	2017344
5256	11.7	1.4	1.0	chr2	69789458	69790233	(172403296)	C	LTR19C	LTR/ERV1	(0)	779	1	2017767
515	25.3	8.2	3.3	chr2	71304459	71304642	(170888887)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	415	2020458
2793	19.6	1.0	0.0	chr2	72386197	72386691	(169806838)	+	MST-int	LTR/ERVL-MaLR	417	916	(735)	2021961
728	19.6	1.6	12.5	chr2	73386913	73387128	(168806401)	C	MER3	DNA/hAT-Charlie	(0)	209	18	2023647
876	33.5	15.1	4.8	chr2	73387198	73388159	(168805370)	C	L2b	LINE/L2	(1)	3374	2306	2023648
2623	17.4	1.3	4.3	chr2	73741962	73742448	(168451081)	C	MER70A	LTR/ERVL	(0)	472	1	2024113
12	19.1	6.7	2.1	chr2	74224866	74224910	(167968619)	+	(CTT)n	Simple_repeat	1	48	(0)	2025034
17342	15.4	2.4	3.7	chr2	74309962	74312229	(167881300)	C	L1MC2	LINE/L1	(1630)	4691	2438	2025180
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
2430	28.1	12.5	2.4	chr2	84876024	84876596	(157316933)	C	L2a	LINE/L2	(850)	2569	1954	2039560
199	27.9	0.0	0.0	chr2	84876616	84876658	(157316871)	C	MIR	SINE/MIR	(212)	50	8	2039562
292	30.4	4.3	8.2	chr2	84958709	84958830	(157234699)	+	L2a	LINE/L2	3309	3425	(1)	2039775
2199	9.9	1.6	1.3	chr2	84958987	84959290	(157234239)	C	AluSx1	SINE/Alu	(6)	306	2	2039776
80	11.7	0.0	5.8	chr2	86041150	86041305	(156152224)	+	(TG)n	Simple_repeat	1	156	(0)	2041974
944	25.6	15.8	0.6	chr2	86102979	86103463	(156090066)	C	L2a	LINE/L2	(0)	3426	2848	2042068
405	33.0	8.7	5.2	chr2	86202045	86202444	(155991085)	C	L3	LINE/CR1	(529)	3570	3156	2042233
26	0.0	0.0	0.0	chr2	88627212	88627236	(153566293)	+	(CAG)n	Simple_repeat	1	25	(0)	2046398
1485	19.9	1.1	0.3	chr2	96454142	96454423	(145739106)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	371	2052165
23587	10.7	1.2	0.5	chr2	96454431	96460785	(145732744)	+	L1PA8	LINE/L1	6	6381	(106)	2052166
6748	20.4	5.4	6.7	chr2	96494976	96496604	(145696925)	C	L1M4	LINE/L1	(5881)	1636	17	2052239
5368	20.7	6.5	3.7	chr2	97935677	97936999	(144256530)	+	L1M4	LINE/L1	2	1364	(6153)	2054304
769	20.0	4.1	2.1	chr2	98608861	98609049	(143584480)	C	MER53	DNA/hAT	(0)	193	1	2055213
3629	25.4	8.2	3.4	chr2	99721554	99722577	(142470952)	C	L1ME2	LINE/L1	(787)	1792	470	2056895
3275	28.2	16.0	2.4	chr2	100222864	100224858	(141968671)	+	L2a	LINE/L2	1111	3422	(4)	2057571
2081	13.0	7.0	0.6	chr2	100369001	100369333	(141824196)	C	LTR26	LTR/ERV1	(0)	603	248	2057787
16	19.2	0.0	0.0	chr2	109109171	109109206	(133084323)	+	(TGAA)n	Simple_repeat	1	36	(0)	2070301
334	17.9	3.6	0.9	chr2	109614414	109614520	(132579009)	+	MER52D	LTR/ERV1	373	482	(1641)	2070959
768	28.2	6.5	9.3	chr2	111364082	111364583	(130828946)	+	MLT1H1	LTR/ERVL-MaLR	32	520	(49)	2073435
1676	22.1	10.0	2.9	chr2	111364608	111364780	(130828749)	+	L1MDa	LINE/L1	5190	5382	(1155)	2073434
2499	21.9	3.0	6.9	chr2	111629714	111630262	(130563267)	C	L1MDa	LINE/L1	(4357)	2276	1765	2073786
2236	10.9	0.0	1.3	chr2	111630263	111630564	(130562965)	C	AluSx	SINE/Alu	(14)	298	1	2073787
513	14.0	8.8	13.0	chr2	111991925	111992055	(130201474)	+	MER21A	LTR/ERVL	70	194	(737)	2074379
3043	20.6	5.3	10.3	chr2	111992036	111992470	(130201059)	+	MER21A	LTR/ERVL	131	570	(361)	2074379
941	26.5	8.3	6.1	chr2	113846794	113847122	(128346407)	+	HAL1	LINE/L1	1503	1839	(668)	2077471
727	25.3	17.7	6.1	chr2	113847138	113847532	(128345997)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	99	2077474
182	25.0	3.7	0.0	chr2	119679438	119679489	(122514040)	+	MIRc	SINE/MIR	91	144	(124)	2085746
7718	20.5	5.9	5.3	chr2	120004214	120004616	(122188913)	C	L1M4	LINE/L1	(7078)	439	6	2086284
1799	26.2	12.0	7.6	chr2	121472445	121474137	(120719392)	+	L1MEc	LINE/L1	169	1946	(4454)	2088735
884	27.2	6.4	8.7	chr2	121613817	121614214	(120579315)	C	MLT1H	LTR/ERVL-MaLR	(40)	509	121	2088959
2401	9.1	0.3	0.0	chr2	121629111	121629418	(120564111)	+	AluY	SINE/Alu	2	310	(1)	2088993
408	24.9	3.0	10.6	chr2	121629419	121629508	(120564021)	+	L1ME4a	LINE/L1	5844	5914	(210)	2088992
2352	10.4	0.0	1.3	chr2	121629509	121629825	(120563704)	+	AluSq2	SINE/Alu	1	313	(0)	2088994
20984	12.5	2.1	0.8	chr2	124626283	124632724	(117560805)	+	L1PA10	LINE/L1	10	6482	(1)	2093444
4997	24.6	5.4	2.2	chr2	129419166	129420474	(112773055)	C	L1MB7	LINE/L1	(6161)	1356	4	2100417
4191	8.5	0.5	2.1	chr2	134590494	134590787	(107602742)	C	MER41A	LTR/ERV1	(0)	554	261	2107610
4048	9.1	4.6	0.6	chr2	134590788	134591329	(107602200)	+	MER61E	LTR/ERV1	1	565	(4)	2107611
5219	21.9	3.4	1.0	chr2	140826426	140828311	(101365218)	+	L1MA4	LINE/L1	1252	3594	(3980)	2116637
491	15.7	4.9	0.7	chr2	141814264	141814390	(100379139)	C	MER61E	LTR/ERV1	(462)	132	1	2117987
207	31.8	10.1	6.1	chr2	144120683	144120796	(98072733)	C	MamTip2	DNA/hAT-Tip100	(159)	146	28	2120956
3789	22.9	13.9	5.2	chr2	144818721	144820711	(97372818)	+	L1MB8	LINE/L1	3	2169	(4698)	2121883
2598	7.4	0.0	0.0	chr2	145008870	145009179	(97184350)	+	AluY	SINE/Alu	1	310	(1)	2122119
20912	13.6	3.5	1.1	chr2	146699532	146704310	(95489219)	+	L1MA1	LINE/L1	16	4928	(2637)	2124233
17	9.4	5.7	0.0	chr2	147844537	147844571	(94348958)	+	(GAGCCCG)n	Simple_repeat	1	37	(0)	2125792
36	19.1	3.3	1.1	chr2	147844582	147844672	(94348857)	+	(GCC)n	Simple_repeat	1	94	(0)	2125793
13	18.9	0.0	0.0	chr2	147844750	147844779	(94348750)	+	(GCC)n	Simple_repeat	1	30	(0)	2125794
1787	16.8	7.6	0.3	chr2	148456144	148456471	(93737058)	C	MLT1A0	LTR/ERVL-MaLR	(11)	354	1	2126645
320	13.4	6.9	20.2	chr2	148456472	148456555	(93736974)	+	L2a	LINE/L2	3316	3426	(0)	2126646
8709	17.8	5.9	2.6	chr2	148838445	148839086	(93354443)	C	L1MB8	LINE/L1	(4276)	2591	1902	2127229
244	27.4	0.0	0.0	chr2	151229198	151229248	(90964281)	+	MIRb	SINE/MIR	186	236	(32)	2130521
2316	27.1	10.1	1.6	chr2	151925673	151926521	(90267008)	C	L2	LINE/L2	(641)	2778	1850	2131568
1894	27.8	8.8	3.0	chr2	152101005	152101615	(90091914)	+	L1M4b	LINE/L1	17	666	(6201)	2131857
553	27.4	6.3	0.6	chr2	153020162	153020326	(89173203)	C	LTR16E2	LTR/ERVL	(2)	566	392	2133269
942	34.6	5.9	1.9	chr2	163034562	163035035	(79158494)	C	MLT1K	LTR/ERVL-MaLR	(34)	561	68	2146427
2082	25.1	7.4	3.2	chr2	165825013	165825620	(76367909)	C	HAL1	LINE/L1	(658)	1849	1228	2150186
12	11.6	3.3	3.2	chr2	166311621	166311650	(75881879)	+	(CTT)n	Simple_repeat	1	31	(0)	2150839
1632	29.1	10.1	1.7	chr2	168008174	168008660	(74184869)	C	L2a	LINE/L2	(618)	2801	2280	2152932
239	29.3	3.6	5.3	chr2	168008664	168008890	(74184639)	C	L2-3_Crp	LINE/L2	(1034)	1062	840	2152934
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
1794	15.0	9.6	3.4	chr2	169797596	169797946	(72395583)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2155627
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
1324	24.5	5.7	3.9	chr2	170660143	170660449	(71533080)	C	L1ME3B	LINE/L1	(1685)	4634	4314	2156981
764	27.6	8.5	4.1	chr2	170660480	170660824	(71532705)	C	MLT1H	LTR/ERVL-MaLR	(52)	437	129	2156990
1928	16.1	2.8	0.3	chr2	171383839	171384223	(70809306)	+	L1MB5	LINE/L1	5546	5940	(234)	2158348
3877	16.6	6.9	0.7	chr2	173952355	173953071	(68240458)	+	L1MB7	LINE/L1	5415	6179	(5)	2162441
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
30	27.0	2.1	1.0	chr2	173964409	173964502	(68229027)	+	(GCC)n	Simple_repeat	1	96	(0)	2162457
22545	11.3	2.5	4.0	chr2	177425650	177430807	(64762722)	C	L1PA10	LINE/L1	(1251)	5080	8	2167648
7178	17.6	3.5	0.9	chr2	178424239	178427048	(63766481)	C	L1M3f	LINE/L1	(3467)	4095	1240	2169067
475	32.9	16.9	3.5	chr2	179737983	179738561	(62454968)	C	L3	LINE/CR1	(7)	4092	3420	2170584
498	20.5	7.1	0.0	chr2	179738625	179738741	(62454788)	C	MER5B	DNA/hAT-Charlie	(1)	177	52	2170585
838	35.2	8.0	4.3	chr2	181464075	181464306	(60729223)	C	L2b	LINE/L2	(1211)	2208	1975	2172755
423	25.5	17.6	0.9	chr2	181464374	181464591	(60728938)	C	L2c	LINE/L2	(1)	3386	3125	2172757
435	31.8	10.7	3.3	chr2	184037109	184037384	(58156145)	C	L4_A_Mam	LINE/RTE-X	(142)	4848	4550	2176053
839	27.1	6.8	2.4	chr2	191575268	191575720	(50617809)	+	LTR82B	LTR/ERVL	11	539	(291)	2186078
857	7.7	0.8	13.6	chr2	197435318	197435472	(44758057)	+	FRAM	SINE/Alu	22	156	(20)	2194005
197	26.8	5.1	5.1	chr2	197435497	197435555	(44757974)	C	L3	LINE/CR1	(15)	4084	4026	2194006
246	8.3	0.0	0.0	chr2	197576515	197576550	(44616979)	+	L1M4	LINE/L1	5007	5042	(1104)	2194320
336	24.8	5.6	2.5	chr2	197576639	197576758	(44616771)	+	Tigger16a	DNA/TcMar-Tigger	760	883	(74)	2194321
265	34.5	3.2	2.2	chr2	197613541	197613632	(44579897)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3719	2194367
209	30.9	7.9	6.8	chr2	197613662	197613824	(44579705)	C	MamGypsy2-LTR	LTR/Gypsy	(16)	167	3	2194368
24	6.9	0.0	0.0	chr2	199625007	199625037	(42568492)	+	(CA)n	Simple_repeat	1	31	(0)	2197113
770	30.8	2.1	7.3	chr2	199679413	199680079	(42513450)	C	L1M6	LINE/L1	(4038)	2458	1828	2197186
997	33.7	8.7	1.8	chr2	199680083	199680693	(42512836)	+	L3	LINE/CR1	3290	3946	(153)	2197183
15	20.5	0.0	0.0	chr2	200812354	200812387	(41381142)	+	(CCG)n	Simple_repeat	1	34	(0)	2198904
2326	10.8	0.0	0.0	chr2	201053684	201053980	(41139549)	+	AluSc8	SINE/Alu	2	298	(13)	2199405
682	22.5	0.6	8.0	chr2	201054003	201054190	(41139339)	+	L1M4	LINE/L1	551	724	(6793)	2199406
1678	26.5	7.0	5.8	chr2	204655750	204656269	(37537260)	C	MLT1H	LTR/ERVL-MaLR	(18)	531	5	2205923
255	27.7	4.7	3.8	chr2	211955003	211955107	(30238422)	+	MamGypLTR1b	LTR/Gypsy	669	774	(8)	2216285
3437	22.5	6.5	0.5	chr2	212401824	212402684	(29790845)	+	L1MD2	LINE/L1	5439	6355	(4)	2216910
2133	16.4	6.7	1.7	chr2	213451506	213451914	(28741615)	C	LTR19C	LTR/ERV1	(7)	772	342	2218245
423	29.7	2.5	6.7	chr2	214586921	214587129	(27606400)	C	L1ME3A	LINE/L1	(133)	6040	5841	2219787
382	34.2	7.6	4.6	chr2	218322514	218322859	(23870670)	+	L2a	LINE/L2	3070	3426	(0)	2225870
3693	23.3	3.8	4.9	chr2	218725856	218726457	(23467072)	C	L1M3f	LINE/L1	(4354)	3211	2591	2226709
1582	9.2	0.0	0.0	chr2	220742272	220742478	(21451051)	C	L1P1	LINE/L1	(5826)	329	123	2230000
1248	25.2	12.5	4.0	chr2	221772608	221773210	(20420319)	C	L2a	LINE/L2	(281)	3145	2480	2231598
531	33.1	2.8	0.0	chr2	221773366	221773504	(20420025)	+	MER115	DNA/hAT-Tip100	60	202	(491)	2231599
335	27.3	2.2	0.0	chr2	222090918	222091005	(20102524)	+	MER133B	DNA?	15	104	(36)	2232103
284	29.6	2.0	1.0	chr2	222090919	222091017	(20102512)	C	MER133B	DNA?	(35)	105	6	2232103
1511	21.9	3.1	0.3	chr2	227776714	227777056	(14416473)	C	L1MD3	LINE/L1	(14)	7981	7629	2241109
2318	21.4	2.1	6.4	chr2	229734372	229734915	(12458614)	+	L1M4	LINE/L1	16	535	(6982)	2244013
3188	15.3	6.6	0.5	chr2	230956937	230957502	(11236027)	C	MER44C	DNA/TcMar-Tigger	(30)	703	101	2245969
13	18.2	0.0	0.0	chr2	230957504	230957534	(11235995)	+	G-rich	Low_complexity	1	31	(0)	2245970
1738	29.1	10.4	12.2	chr2	232201075	232201971	(9991558)	+	L1MC4	LINE/L1	7244	8042	(0)	2248330
7883	23.7	5.6	1.9	chr2	232471435	232474484	(9719045)	C	L1MA8	LINE/L1	(3791)	3774	835	2248712
2212	7.6	0.0	0.3	chr2	235681018	235681307	(6512222)	C	AluY	SINE/Alu	(21)	290	2	2253997
13454	18.2	3.8	1.5	chr2	236479125	236481598	(5711931)	C	L1MA4	LINE/L1	(3783)	3779	1251	2255053
349	27.4	4.7	4.7	chr2	236893567	236893738	(5299791)	C	HAL1b	LINE/L1	(1031)	1390	1219	2255643
13	19.3	9.4	0.0	chr2	238239917	238239969	(3953560)	+	G-rich	Low_complexity	1	58	(0)	2257547
220	29.0	20.2	0.3	chr2	238248072	238248365	(3945164)	C	L2a	LINE/L2	(1142)	2277	1911	2257554
7380	19.8	7.0	3.8	chr2	238974394	238976745	(3216784)	+	L1MB8	LINE/L1	1	2525	(4992)	2258451
2002	8.8	0.3	13.7	chr2	241344784	241345134	(848395)	+	AluSq	SINE/Alu	1	304	(9)	2261008
1267	30.8	12.4	2.7	chr20	118147	119020	(64325147)	C	L1MEg2	LINE/L1	(5492)	960	1	2262265
378	29.8	2.6	0.0	chr20	299568	299681	(64144486)	C	MIRc	SINE/MIR	(144)	124	8	2262592
253	30.3	3.5	0.9	chr20	550410	550519	(63893648)	+	MIR	SINE/MIR	150	262	(0)	2263155
14	35.9	0.0	0.0	chr20	653096	653162	(63791005)	+	(GCCCG)n	Simple_repeat	1	67	(0)	2263435
1178	25.5	19.6	3.0	chr20	702872	703213	(63740954)	+	MLT1G3	LTR/ERVL-MaLR	205	593	(2)	2263550
567	28.4	2.6	0.0	chr20	703218	703365	(63740802)	C	MIR	SINE/MIR	(62)	200	49	2263552
3868	23.5	2.1	1.6	chr20	743985	744796	(63699371)	+	L1M4b	LINE/L1	8	823	(6044)	2263665
214	35.9	9.0	1.5	chr20	2119279	2119411	(62324756)	C	L2b	LINE/L2	(292)	3083	2940	2266314
215	27.9	4.4	7.5	chr20	2119535	2119627	(62324540)	C	MIRb	SINE/MIR	(46)	222	133	2266315
5734	20.9	7.3	1.7	chr20	2219010	2220709	(62223458)	C	L1MDa	LINE/L1	(4111)	2522	722	2266516
2566	28.4	9.4	3.0	chr20	2497091	2497732	(61946435)	C	L2a	LINE/L2	(895)	2524	1833	2267072
9162	19.7	3.0	4.1	chr20	2734417	2735575	(61708592)	C	L1M4	LINE/L1	(6338)	1383	221	2267499
720	12.7	0.9	0.9	chr20	3403824	3403933	(61040234)	C	FLAM_A	SINE/Alu	(14)	128	19	2268786
376	20.8	0.0	1.3	chr20	3403957	3404034	(61040133)	+	L2	LINE/L2	1970	2046	(1373)	2268785
2271	10.0	0.0	2.0	chr20	3404035	3404335	(61039832)	C	AluSq2	SINE/Alu	(18)	295	1	2268787
1501	13.2	9.6	0.0	chr20	4041513	4041747	(60402420)	+	AluJb	SINE/Alu	1	260	(52)	2270010
3165	25.3	9.0	4.8	chr20	4260463	4261956	(60182211)	C	MER89-int	LTR/ERV1	(5212)	1589	3	2270456
1163	28.9	12.8	4.0	chr20	4267084	4267491	(60176676)	C	L2a	LINE/L2	(1015)	2404	1936	2270469
429	27.1	2.7	0.7	chr20	4267494	4267638	(60176529)	+	L1ME3Cz	LINE/L1	80	227	(770)	2270472
1867	23.0	5.7	1.2	chr20	4548589	4549094	(59895073)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	20	2270912
636	26.2	10.5	9.7	chr20	4564260	4564580	(59879587)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	226	2270938
2413	9.8	0.0	0.0	chr20	4606668	4606952	(59837215)	C	AluSq2	SINE/Alu	(28)	285	1	2271015
449	10.4	1.5	0.0	chr20	4606995	4607061	(59837106)	C	MER41A	LTR/ERV1	(88)	466	399	2271016
26	20.3	4.4	5.9	chr20	5610705	5610818	(58833349)	+	(CCGGC)n	Simple_repeat	1	119	(0)	2272845
300	26.3	1.0	1.0	chr20	8129716	8129811	(56314356)	C	MLT1J1	LTR/ERVL-MaLR	(302)	187	92	2276787
1876	32.4	12.9	3.9	chr20	11098122	11099230	(53344937)	C	ERVL-E-int	LTR/ERVL	(383)	5284	4075	2281527
2342	18.1	0.7	6.1	chr20	13603771	13604169	(50839998)	+	MER31A	LTR/ERV1	18	393	(92)	2285081
2426	18.5	1.2	0.5	chr20	13604170	13604592	(50839575)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2285082
3808	20.9	4.9	4.1	chr20	14474312	14475945	(49968222)	C	L1MA6	LINE/L1	(3333)	4229	2616	2286474
1094	24.9	9.6	8.4	chr20	17743035	17743559	(46700608)	+	MLT1H	LTR/ERVL-MaLR	18	549	(0)	2291384
2295	8.6	1.4	0.0	chr20	18570396	18570687	(45873480)	+	AluSc	SINE/Alu	1	296	(13)	2292899
365	14.8	2.1	0.0	chr20	20227314	20227384	(44216783)	C	L1M4b	LINE/L1	(4708)	2159	2100	2295352
325	26.2	6.9	0.8	chr20	20608023	20608145	(43836022)	+	MIR3	SINE/MIR	73	203	(5)	2295808
29	6.7	2.0	2.0	chr20	20712582	20712630	(43731537)	+	(CGC)n	Simple_repeat	1	50	(0)	2295951
3296	18.1	2.6	1.3	chr20	21187968	21188582	(43255585)	+	MER39	LTR/ERV1	85	707	(0)	2296734
4408	24.1	8.1	15.6	chr20	24560291	24561751	(39882416)	C	L1M4a1	LINE/L1	(1115)	2324	861	2301054
14	15.4	5.6	0.0	chr20	25057940	25057975	(39386192)	+	(GCT)n	Simple_repeat	1	38	(0)	2301646
697	31.4	9.6	3.6	chr20	25919848	25920626	(38523541)	+	L1MEg	LINE/L1	1250	1875	(5458)	2302955
2530	30.2	5.9	4.7	chr20	26144497	26145436	(38298731)	C	L1M4b	LINE/L1	(5914)	953	2	2303365
2496	7.7	0.6	1.0	chr20	31685122	31685432	(32758735)	+	AluY	SINE/Alu	2	311	(0)	2306622
457	30.8	3.0	1.2	chr20	31685561	31685721	(32758446)	+	MIR3	SINE/MIR	40	203	(5)	2306623
181	26.4	4.0	7.7	chr20	31984508	31984585	(32459582)	C	MIRc	SINE/MIR	(82)	186	112	2307346
620	32.0	3.0	0.5	chr20	31984832	31985067	(32459100)	+	MIR	SINE/MIR	27	261	(1)	2307347
460	24.0	9.3	2.4	chr20	32743631	32743826	(31700341)	+	MIRb	SINE/MIR	46	267	(1)	2309172
6287	11.5	15.0	2.1	chr20	33044919	33045991	(31398176)	+	MER11B	LTR/ERVK	1	1236	(0)	2309823
398	32.3	8.4	2.1	chr20	35251499	35251688	(29192479)	C	MIRc	SINE/MIR	(33)	235	33	2314882
12	13.7	0.0	0.0	chr20	35251726	35251749	(29192418)	+	(ATCA)n	Simple_repeat	1	24	(0)	2314883
2102	4.5	10.3	2.8	chr20	35412360	35412647	(29031520)	+	AluSz6	SINE/Alu	1	312	(0)	2315198
1155	28.1	4.3	1.4	chr20	36408146	36408509	(28035658)	C	LTR16C	LTR/ERVL	(0)	489	115	2317546
2684	22.0	6.0	1.7	chr20	38020354	38021152	(26423015)	+	L1MEg	LINE/L1	6262	7116	(365)	2321266
13	18.8	0.0	0.0	chr20	38473102	38473132	(25971035)	+	(CCCTC)n	Simple_repeat	1	31	(0)	2322241
11407	13.2	1.8	6.7	chr20	43481125	43482267	(20961900)	C	MER57A-int	LTR/ERV1	(1717)	4470	3399	2331267
380	27.6	1.0	3.0	chr20	44015826	44015926	(20428241)	+	MER131	DNA?	22	120	(95)	2332468
480	31.1	17.7	0.3	chr20	44621509	44621863	(19822304)	+	L2	LINE/L2	1931	2360	(1059)	2333923
30	17.1	1.6	1.6	chr20	44816340	44816400	(19627767)	+	(TG)n	Simple_repeat	1	62	(0)	2334417
12	19.7	0.0	0.0	chr20	47281797	47281825	(17162342)	+	(AACAA)n	Simple_repeat	1	29	(0)	2339650
961	27.6	6.1	5.4	chr20	48177254	48177625	(16266542)	C	MER21C	LTR/ERVL	(141)	797	423	2341602
14	29.6	4.8	2.3	chr20	49188169	49188251	(15255916)	+	GA-rich	Low_complexity	1	87	(0)	2343771
1231	24.9	10.1	7.1	chr20	49979982	49980147	(14464020)	C	L1ME3D	LINE/L1	(41)	6201	6010	2345768
748	16.3	11.3	0.0	chr20	49980148	49980288	(14463879)	+	FRAM	SINE/Alu	5	163	(13)	2345769
1748	16.9	0.0	5.8	chr20	50022608	50022915	(14421252)	+	AluJb	SINE/Alu	7	296	(16)	2345880
402	16.9	0.0	0.0	chr20	50022943	50023019	(14421148)	C	MER53	DNA/hAT	(20)	173	97	2345881
14	10.3	2.9	5.6	chr20	50153672	50153706	(14290461)	+	(GGC)n	Simple_repeat	1	36	(0)	2346210
18	15.0	4.1	3.9	chr20	50190916	50190964	(14253203)	+	(GCA)n	Simple_repeat	1	51	(0)	2346323
335	29.8	11.2	7.1	chr20	50794681	50794850	(13649317)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	2347757
2581	4.6	0.7	0.3	chr20	51845230	51845531	(12598636)	+	AluY	SINE/Alu	3	305	(6)	2350057
534	18.0	6.6	9.9	chr20	51845532	51845623	(12598544)	+	MER5A1	DNA/hAT-Charlie	70	166	(0)	2350056
1524	14.2	5.9	12.7	chr20	51845634	51845963	(12598204)	C	AluJr	SINE/Alu	(6)	306	1	2350058
1010	22.8	3.9	3.8	chr20	51895347	51895667	(12548500)	C	L1MC4a	LINE/L1	(24)	7858	7564	2350199
1151	27.0	6.2	8.2	chr20	51977868	51978107	(12466060)	+	MLT1D	LTR/ERVL-MaLR	5	217	(288)	2350431
3732	10.6	1.8	8.7	chr20	51978108	51978532	(12465635)	+	MER61E	LTR/ERV1	1	385	(184)	2350432
467	22.8	5.0	5.0	chr20	52011388	52011586	(12432581)	C	L1ME3G	LINE/L1	(7)	917	719	2350528
954	13.1	1.4	0.0	chr20	52105436	52105580	(12338587)	+	MER5A1	DNA/hAT-Charlie	16	162	(4)	2350768
4741	21.4	7.2	1.9	chr20	58937882	58938869	(5505298)	C	L1M4	LINE/L1	(6386)	1131	87	2363667
619	8.8	2.4	0.0	chr20	58938871	58938950	(5505217)	+	AluYk3	SINE/Alu	219	300	(11)	2363669
571	26.8	7.0	1.8	chr20	59228151	59228367	(5215800)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	321	2364120
416	13.4	4.7	0.0	chr20	62366949	62367030	(2077137)	C	LTR35B	LTR/ERV1	(491)	114	29	2368467
15	11.9	5.9	5.6	chr20	62367121	62367171	(2076996)	+	(CCGCGC)n	Simple_repeat	1	54	(0)	2368468
19	25.8	6.0	2.3	chr20	63177397	63177479	(1266688)	+	(GC)n	Simple_repeat	1	88	(0)	2369341
17	16.5	7.1	1.7	chr20	63177580	63177635	(1266532)	+	(GCGACG)n	Simple_repeat	1	60	(0)	2369342
13	19.6	4.0	3.9	chr20	63272867	63272916	(1171251)	+	(GCCCT)n	Simple_repeat	1	52	(0)	2369449
12	23.1	3.7	3.6	chr20	63642358	63642411	(801756)	+	(CCTCCCG)n	Simple_repeat	1	56	(0)	2369821
15	29.5	0.0	4.2	chr20	63642514	63642584	(801583)	+	(CCCCCG)n	Simple_repeat	1	71	(0)	2369822
200	26.2	6.2	0.0	chr20	63658031	63658091	(786076)	C	L2c	LINE/L2	(685)	2734	2670	2369855
746	22.1	2.8	1.7	chr21	26191651	26191764	(20518219)	C	MER3	DNA/hAT-Charlie	(89)	120	7	2393642
480	27.8	13.5	1.7	chr21	26191782	26192015	(20517968)	C	L2a	LINE/L2	(1814)	1605	1340	2393634
22898	13.7	3.3	3.2	chr21	28554616	28557697	(18152286)	+	L1PA10	LINE/L1	176	3502	(3112)	2396928
8067	20.4	3.3	3.8	chr21	29202948	29204160	(17505823)	C	L1M4	LINE/L1	(6307)	1210	17	2397932
2250	28.2	1.3	3.2	chr21	31240228	31240860	(15469123)	+	L1M4	LINE/L1	20	640	(6877)	2400972
14	15.6	3.4	8.2	chr21	31659922	31659980	(15050003)	+	(GCCCG)n	Simple_repeat	1	61	(0)	2401850
28	20.6	7.3	1.7	chr21	31660030	31660138	(15049845)	+	G-rich	Low_complexity	1	117	(0)	2401851
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
5781	18.0	5.9	4.4	chr21	34039933	34041150	(12668833)	+	L1MB7	LINE/L1	5	1241	(6276)	2406046
253	22.4	13.3	0.0	chr21	34543977	34544060	(12165923)	+	MIRb	SINE/MIR	106	217	(51)	2406798
222	28.0	10.7	0.0	chr21	34544061	34544135	(12165848)	+	MER5A	DNA/hAT-Charlie	3	86	(103)	2406799
243	16.4	21.4	0.0	chr21	34544139	34544193	(12165790)	+	MLT1E3	LTR/ERVL-MaLR	1	70	(610)	2406800
1311	19.1	20.6	2.3	chr21	34544255	34544608	(12165375)	+	MLT1E3	LTR/ERVL-MaLR	189	624	(0)	2406800
1215	23.1	2.9	1.8	chr21	35527592	35527930	(11182053)	C	MLT1A0	LTR/ERVL-MaLR	(13)	352	10	2408244
328	20.2	9.5	16.2	chr21	36964924	36965083	(9744900)	+	MER105	DNA/hAT-Charlie	5	152	(51)	2410746
19	11.9	4.1	3.9	chr21	37368074	37368122	(9341861)	+	G-rich	Low_complexity	1	51	(0)	2411475
12	22.8	6.9	1.6	chr21	37368099	37368156	(9341827)	+	(CGGCCG)n	Simple_repeat	1	62	(0)	2411476
2564	25.5	10.2	2.6	chr21	37383928	37384925	(9325058)	+	L1MEc	LINE/L1	71	1153	(5247)	2411502
2021	27.1	8.9	7.6	chr21	37502174	37503434	(9206549)	C	L1MEf	LINE/L1	(3983)	3054	1747	2411692
1516	20.3	5.0	3.9	chr21	38224043	38224444	(8485539)	C	LTR76	LTR/ERV1	(0)	675	214	2412760
9711	13.6	1.7	0.8	chr21	38227979	38229403	(8480580)	C	HERV3-int	LTR/ERV1	(6987)	1439	2	2412761
1428	21.9	5.0	3.9	chr21	38229404	38229805	(8480178)	C	LTR76	LTR/ERV1	(0)	675	214	2412761
836	27.0	12.3	3.1	chr21	38798222	38798611	(7911372)	C	L2a	LINE/L2	(4)	3422	2992	2413532
436	23.0	3.4	0.0	chr21	38798675	38798787	(7911196)	C	L2a	LINE/L2	(530)	2889	2773	2413532
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
914	23.4	5.0	1.6	chr21	42000967	42001218	(4708765)	C	MIR	SINE/MIR	(0)	262	2	2418291
394	26.3	3.5	1.4	chr21	42001230	42001369	(4708614)	C	MIR	SINE/MIR	(70)	192	52	2418292
212	30.9	9.6	0.0	chr21	42001371	42001464	(4708519)	C	L2a	LINE/L2	(30)	3396	3293	2418293
485	34.6	2.6	0.8	chr21	42080789	42081050	(4628933)	C	L1ME4a	LINE/L1	(225)	5899	5633	2418414
389	33.2	8.6	0.4	chr21	42232410	42232675	(4477308)	C	MamRep605	LTR?	(537)	312	23	2418626
2104	12.1	7.1	1.7	chr21	42609308	42609667	(4100316)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2419086
303	14.9	0.0	0.0	chr21	42609670	42609716	(4100267)	C	LTR47A	LTR/ERVL	(405)	47	1	2419082
367	28.5	6.6	10.3	chr21	42609717	42610014	(4099969)	C	MLT1I	LTR/ERVL-MaLR	(43)	368	83	2419087
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
26	3.1	3.0	0.0	chr21	43719206	43719238	(2990745)	+	(GAGCCC)n	Simple_repeat	1	34	(0)	2420696
13	19.5	0.0	2.7	chr21	43719258	43719294	(2990689)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2420697
13	24.8	5.7	2.7	chr21	43865646	43865715	(2844268)	+	(GCCGG)n	Simple_repeat	1	74	(0)	2420954
4616	24.9	8.7	6.2	chr21	44546628	44548424	(2161559)	C	L1M4	LINE/L1	(5580)	1937	91	2421876
1977	25.9	13.7	5.0	chr21	44868240	44869428	(1840555)	+	L1MC4	LINE/L1	6705	8266	(1038)	2422267
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
11	21.0	0.0	10.0	chr21	45074981	45075040	(1634943)	+	(CGCCCGG)n	Simple_repeat	1	60	(0)	2422495
10407	16.0	4.3	2.8	chr21	45716734	45718471	(991512)	C	L1MB7	LINE/L1	(1365)	5279	3507	2423125
1582	20.3	1.5	0.3	chr21	45718469	45718799	(991184)	C	L1MB7	LINE/L1	(7181)	336	2	2423125
12	7.5	6.7	3.1	chr21	46324785	46324814	(385169)	+	(GCGCGG)n	Simple_repeat	1	32	(0)	2423813
3581	18.4	3.2	1.9	chr22	19049929	19050741	(31767727)	+	L1MD1	LINE/L1	1765	2588	(4279)	2431352
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
13	18.4	1.2	4.9	chr22	20117489	20117554	(30700914)	+	G-rich	Low_complexity	1	63	(0)	2432925
2304	11.9	0.0	0.0	chr22	21218367	21218677	(29599791)	C	AluSx	SINE/Alu	(1)	311	1	2434767
13	24.0	6.0	2.8	chr22	21568143	21568209	(29250259)	+	(GCGCC)n	Simple_repeat	1	71	(0)	2435443
200	28.1	10.6	3.6	chr22	23068113	23068278	(27750190)	+	L2b	LINE/L2	2969	3147	(228)	2437721
15	18.7	0.0	10.4	chr22	23787102	23787168	(27031300)	+	(CCCCGC)n	Simple_repeat	1	67	(0)	2438971
14	22.3	0.0	4.3	chr22	23787357	23787402	(27031066)	+	G-rich	Low_complexity	1	46	(0)	2438972
434	22.8	8.1	3.6	chr22	24146823	24147005	(26671463)	C	MIRb	SINE/MIR	(48)	220	11	2439572
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
2292	11.4	0.0	1.6	chr22	24320001	24320308	(26498160)	+	AluSz	SINE/Alu	10	312	(0)	2439857
907	25.1	5.7	0.8	chr22	24320461	24320709	(26497759)	+	MIR	SINE/MIR	1	262	(0)	2439858
1739	19.8	5.4	9.2	chr22	24529998	24530356	(26288112)	+	L1M4	LINE/L1	3040	3406	(2740)	2440194
854	26.6	3.3	3.7	chr22	24978009	24978110	(25840358)	C	MIR	SINE/MIR	(1)	261	161	2441145
2492	11.1	0.6	0.8	chr22	24978111	24978466	(25840002)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2441146
829	25.0	18.2	1.3	chr22	25443900	25444370	(25374098)	+	L1MC2	LINE/L1	5791	6342	(2)	2442193
817	31.5	6.2	6.0	chr22	25895939	25896438	(24922030)	C	L1MEd	LINE/L1	(6348)	738	238	2443117
334	27.5	20.5	0.8	chr22	25945227	25945468	(24873000)	+	L2c	LINE/L2	3085	3386	(1)	2443215
754	26.5	13.3	6.8	chr22	27431814	27432302	(23386166)	+	MLT1H	LTR/ERVL-MaLR	24	549	(0)	2446674
340	23.4	5.1	2.3	chr22	27632762	27632890	(23185578)	C	MIRc	SINE/MIR	(105)	163	20	2447149
218	28.8	6.3	5.6	chr22	27671009	27671133	(23147335)	+	MIRb	SINE/MIR	31	156	(52)	2447259
412	28.1	8.6	5.6	chr22	27671230	27671444	(23147024)	+	L2b	LINE/L2	2976	3197	(178)	2447260
931	27.6	13.3	0.6	chr22	27676242	27676601	(23141867)	C	L1ME3	LINE/L1	(0)	6162	5750	2447272
1695	24.0	7.5	0.1	chr22	27676605	27677073	(23141395)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	3	2447273
26	19.0	4.4	5.3	chr22	28773015	28773138	(22045330)	+	G-rich	Low_complexity	1	122	(0)	2449171
1547	18.8	3.8	0.7	chr22	28792575	28792856	(22025612)	C	AluSx3	SINE/Alu	(20)	291	1	2449218
2248	12.4	0.0	1.0	chr22	29459230	29459543	(21358925)	+	AluSc8	SINE/Alu	1	311	(0)	2450606
256	34.4	7.6	0.0	chr22	29463398	29463544	(21354924)	C	MIR1_Amn	SINE/MIR	(0)	208	42	2450617
15	20.0	3.6	3.5	chr22	29463575	29463635	(21354833)	+	(GGTGGCT)n	Simple_repeat	1	61	(0)	2450618
749	28.8	3.3	3.7	chr22	29821384	29821625	(20996843)	+	MIRb	SINE/MIR	27	267	(1)	2451406
14	23.7	3.5	3.3	chr22	29883118	29883175	(20935293)	+	(GCGC)n	Simple_repeat	1	60	(0)	2451570
13	0.0	0.0	0.0	chr22	29883217	29883233	(20935235)	+	(GGC)n	Simple_repeat	1	17	(0)	2451571
32	8.3	1.9	1.8	chr22	30246390	30246443	(20572025)	+	(GGA)n	Simple_repeat	1	55	(0)	2452228
2314	10.5	0.3	0.0	chr22	30959962	30960266	(19858202)	C	AluSq2	SINE/Alu	(7)	306	1	2453669
23	33.0	0.0	2.9	chr22	30969596	30969698	(19848770)	+	(CGG)n	Simple_repeat	1	103	(0)	2453683
3844	23.0	3.0	3.1	chr22	31029193	31029588	(19788880)	C	L1MDa	LINE/L1	(4505)	2128	1732	2453810
2392	8.4	1.3	0.3	chr22	31029589	31029897	(19788571)	C	AluSx	SINE/Alu	(0)	312	1	2453823
315	22.4	18.9	0.9	chr22	31123337	31123444	(19695024)	+	MIR3	SINE/MIR	20	151	(57)	2454068
4256	22.1	8.7	10.6	chr22	31568894	31569618	(19248850)	+	L1MC5a	LINE/L1	1618	2373	(404)	2455122
2083	23.3	6.6	5.4	chr22	32619612	32620151	(18198317)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	2457359
15	14.5	3.9	5.7	chr22	32801692	32801742	(18016726)	+	(CAGGCGG)n	Simple_repeat	1	53	(0)	2457743
18	17.7	0.0	0.0	chr22	32801742	32801779	(18016689)	+	(CTC)n	Simple_repeat	1	38	(0)	2457744
463	28.9	7.9	2.1	chr22	35478316	35478506	(15339962)	+	MIR3	SINE/MIR	5	207	(1)	2463106
12	11.9	0.0	6.5	chr22	35630044	35630074	(15188394)	+	G-rich	Low_complexity	1	31	(0)	2463469
18	29.1	0.0	1.6	chr22	37051769	37051829	(13766639)	+	(GGC)n	Simple_repeat	1	61	(0)	2466409
301	28.8	18.7	2.1	chr22	37465672	37466057	(13352411)	C	L2a	LINE/L2	(5)	3421	2957	2467299
12	8.1	3.6	3.5	chr22	37658752	37658779	(13159689)	+	(CGGC)n	Simple_repeat	1	29	(0)	2467752
13	8.5	4.0	0.0	chr22	37905914	37905938	(12912530)	+	(GGC)n	Simple_repeat	1	26	(0)	2468378
14	21.3	2.6	0.0	chr22	38272954	38272991	(12545477)	+	(CGC)n	Simple_repeat	1	39	(0)	2469147
18	21.4	5.1	0.0	chr22	38844089	38844147	(11974321)	+	(CGGCCC)n	Simple_repeat	1	62	(0)	2470392
412	19.0	0.0	1.2	chr22	39147760	39147839	(11670629)	+	MIR3	SINE/MIR	109	187	(21)	2470993
273	35.3	5.8	0.1	chr22	39147919	39148120	(11670348)	C	MIRb	SINE/MIR	(2)	260	47	2470994
13	0.0	5.0	0.0	chr22	39350212	39350231	(11468237)	+	(CGG)n	Simple_repeat	1	21	(0)	2471455
1915	18.6	9.2	1.3	chr22	40444182	40444633	(10373835)	+	L1MDa	LINE/L1	1377	1867	(4766)	2473562
3035	22.1	2.5	8.8	chr22	40517607	40518488	(10299980)	+	MER21C	LTR/ERVL	1	921	(17)	2473711
280	32.5	9.5	0.9	chr22	41429880	41429994	(9388474)	C	MIR	SINE/MIR	(0)	262	137	2475907
393	24.2	1.0	0.0	chr22	41587812	41587910	(9230558)	+	L1ME3G	LINE/L1	825	924	(0)	2476268
1057	24.9	3.1	2.0	chr22	41617165	41617418	(9201050)	+	MIR	SINE/MIR	4	260	(2)	2476336
12	24.6	3.6	3.5	chr22	43186826	43186881	(7631587)	+	(CCG)n	Simple_repeat	1	58	(0)	2479779
7038	18.3	5.0	1.4	chr22	43799658	43802109	(7016359)	+	L1MA4	LINE/L1	1244	3797	(3765)	2480800
14	15.8	4.3	4.2	chr22	44702282	44702335	(6116133)	+	(GGCCGG)n	Simple_repeat	1	54	(0)	2482468
22	21.2	2.4	5.8	chr22	44702384	44702468	(6116000)	+	(GGCGC)n	Simple_repeat	1	87	(0)	2482469
183	37.0	7.1	2.6	chr22	45068816	45069004	(5749464)	+	L2b	LINE/L2	2792	2989	(430)	2483172
505	21.7	5.3	5.3	chr22	45069039	45069189	(5749279)	C	MLT1J1	LTR/ERVL-MaLR	(7)	437	287	2483173
13	21.0	0.0	7.7	chr22	46053863	46053914	(4764554)	+	G-rich	Low_complexity	1	52	(0)	2484960
2157	10.7	0.7	0.0	chr22	46531186	46531505	(4286963)	C	AluSx1	SINE/Alu	(0)	312	1	2485677
2377	9.8	4.9	2.5	chr22	46646750	46647104	(4171364)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2485845
22215	9.7	1.4	1.0	chr22	46817264	46822815	(3995653)	C	L1PA8A	LINE/L1	(0)	6316	753	2486113
503	32.4	2.4	5.6	chr22	47263091	47263430	(3555038)	+	MLT1H	LTR/ERVL-MaLR	108	436	(113)	2486621
2488	26.3	6.7	1.4	chr22	49521516	49522258	(1296210)	C	L1M4	LINE/L1	(6715)	802	17	2489476
321	31.1	5.0	5.6	chr22	49589577	49589736	(1228732)	+	MLT1L	LTR/ERVL-MaLR	271	429	(181)	2489551
6919	13.5	3.7	0.3	chr22	49766981	49768136	(1050332)	C	L1M3f	LINE/L1	(4132)	1196	1	2489732
2264	10.8	0.3	1.9	chr22	49896627	49896940	(921528)	C	AluSx1	SINE/Alu	(3)	309	1	2489922
3698	15.9	5.7	0.4	chr22	49896988	49897658	(920810)	C	L1MC1	LINE/L1	(306)	6027	5322	2489923
8363	18.1	4.2	7.8	chr22	49985205	49987222	(831246)	C	L1M4	LINE/L1	(1067)	5079	3143	2490028
1034	26.8	9.4	2.6	chr22	50595956	50596250	(222218)	+	MLT1H1	LTR/ERVL-MaLR	238	555	(0)	2490927
1000	28.3	11.9	4.1	chr3	4739661	4740169	(193555390)	C	MLT1G1	LTR/ERVL-MaLR	(7)	572	19	2499522
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
607	25.8	5.2	4.4	chr3	8906312	8906538	(189389021)	+	L2a	LINE/L2	1799	2027	(1392)	2506151
411	26.5	2.4	3.5	chr3	8906605	8906776	(189388783)	C	L1MEc	LINE/L1	(6209)	191	22	2506153
676	29.9	4.5	11.5	chr3	9111059	9111537	(189184022)	C	L2b	LINE/L2	(1)	3374	2931	2506514
1488	14.8	0.0	0.5	chr3	9672247	9672462	(188623097)	C	AluSx3	SINE/Alu	(20)	291	77	2507727
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
201	26.7	9.6	1.3	chr3	9843710	9843785	(188451774)	C	MIR3	SINE/MIR	(17)	191	109	2508087
394	24.6	7.2	2.7	chr3	9891094	9891239	(188404320)	+	MIRb	SINE/MIR	87	239	(29)	2508189
12	21.5	7.1	1.7	chr3	10248718	10248773	(188046786)	+	(CGGCGCC)n	Simple_repeat	1	60	(0)	2509045
240	27.2	11.2	0.0	chr3	11147025	11147127	(187148432)	+	MamGypLTR1d	LTR/Gypsy	685	800	(13)	2510852
328	29.7	11.4	1.3	chr3	11147131	11147287	(187148272)	+	L2b	LINE/L2	3193	3367	(8)	2510850
17	22.6	1.4	5.7	chr3	11154565	11154633	(187140926)	+	G-rich	Low_complexity	1	70	(0)	2510877
504	27.1	5.4	4.0	chr3	13179250	13179479	(185116080)	+	L1MCa	LINE/L1	1489	1722	(4695)	2514777
913	18.8	7.5	6.5	chr3	13179490	13179572	(185115987)	+	L1MCa	LINE/L1	2568	2653	(3668)	2514777
238	25.4	3.1	1.6	chr3	14124435	14124498	(184171061)	+	MIRc	SINE/MIR	88	152	(116)	2516338
278	29.9	0.0	0.0	chr3	14453469	14453545	(183842014)	+	MIRc	SINE/MIR	78	154	(114)	2516988
1013	28.7	10.4	5.3	chr3	15243952	15244194	(183051365)	C	L2a	LINE/L2	(1378)	2041	1780	2518433
537	27.5	9.2	1.6	chr3	17138859	17139109	(181156450)	C	LTR16C	LTR/ERVL	(0)	489	218	2521462
1123	23.1	13.1	0.7	chr3	17219628	17219944	(181075615)	C	L1MB7	LINE/L1	(2533)	621	18	2521573
16689	9.4	3.2	1.6	chr3	17489488	17492441	(180803118)	C	L1PA10	LINE/L1	(163)	6190	3194	2521935
1961	28.2	9.0	7.7	chr3	17724395	17725677	(180569882)	C	L1MEd	LINE/L1	(5592)	1494	174	2522270
36	22.6	4.0	2.3	chr3	18425062	18425128	(179870431)	+	(GCCGCT)n	Simple_repeat	1	108	(21)	2523268
21	20.8	0.0	0.0	chr3	18425129	18425174	(179870385)	+	(GCT)n	Simple_repeat	1	46	(0)	2523269
36	22.6	4.0	2.3	chr3	18425175	18425185	(179870374)	+	(GCCGCT)n	Simple_repeat	109	129	(0)	2523268
14	18.1	5.4	5.1	chr3	18425215	18425220	(179870339)	+	(CCG)n	Simple_repeat	1	57	(0)	2523270
15	25.6	2.0	0.0	chr3	18425221	18425271	(179870288)	+	(GCCCGCA)n	Simple_repeat	1	52	(0)	2523271
1909	15.3	4.7	2.5	chr3	18596946	18597301	(179698258)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2523510
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
1517	22.8	14.4	4.3	chr3	23596211	23596701	(174698858)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	2530359
2965	18.9	3.9	3.2	chr3	23940365	23940917	(174354642)	+	Charlie5	DNA/hAT-Charlie	126	689	(1935)	2531062
13	14.9	2.3	6.8	chr3	30606765	30606807	(167688752)	+	(GCGCG)n	Simple_repeat	1	44	(0)	2540793
1545	15.1	8.3	1.1	chr3	33135347	33135625	(165159934)	+	AluJb	SINE/Alu	1	301	(11)	2545374
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
1446	30.6	10.1	4.0	chr3	36782408	36783471	(161512088)	+	L1M7	LINE/L1	639	1775	(4443)	2550394
1601	21.5	1.3	0.0	chr3	41315411	41315717	(156979842)	+	L1M4b	LINE/L1	12	322	(6545)	2557320
5103	25.4	4.7	2.0	chr3	41543753	41545132	(156750427)	C	L1M4	LINE/L1	(6079)	1438	20	2557616
1741	25.9	14.7	0.8	chr3	41780430	41780962	(156514597)	+	LTR87	LTR/ERVL?	5	624	(0)	2557932
965	12.7	2.4	10.3	chr3	42163587	42163693	(156131866)	+	MER5A	DNA/hAT-Charlie	70	171	(18)	2558669
1752	13.9	6.5	5.1	chr3	43138681	43139013	(155156546)	+	MER44A	DNA/TcMar-Tigger	2	339	(0)	2560201
5118	20.4	5.3	3.0	chr3	43139014	43139154	(155156405)	C	L1M4	LINE/L1	(7303)	214	72	2560197
2023	13.8	3.9	0.0	chr3	43139155	43139452	(155156107)	C	AluSc8	SINE/Alu	(1)	310	1	2560202
1511	21.6	17.7	2.0	chr3	43855735	43856398	(154439161)	+	LTR50	LTR/ERVL	2	792	(3)	2561260
2795	16.2	8.4	0.8	chr3	47194063	47194577	(151100982)	C	MER89	LTR/ERV1	(0)	559	2	2566627
16	26.7	0.0	3.5	chr3	49470325	49470381	(148825178)	+	(GGC)n	Simple_repeat	1	57	(0)	2571453
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
1484	30.6	9.3	2.2	chr3	51566647	51567331	(146728228)	C	L1MEd	LINE/L1	(6325)	778	40	2574625
11	26.6	5.6	2.7	chr3	53954786	53954856	(144340703)	+	(AGAAGAC)n	Simple_repeat	1	75	(0)	2578300
1003	25.1	10.4	3.5	chr3	53954931	53955168	(144340391)	+	L1ME3G	LINE/L1	318	562	(362)	2578301
4145	9.3	0.0	9.1	chr3	54212100	54212770	(144082789)	C	MER4B	LTR/ERV1	(0)	610	1	2578751
305	24.5	2.9	3.8	chr3	54212833	54212938	(144082621)	+	MIRb	SINE/MIR	118	222	(46)	2578752
523	31.4	10.2	0.5	chr3	56024106	56024326	(142271233)	C	MLT1N2	LTR/ERVL-MaLR	(1)	561	317	2581391
298	33.5	9.7	1.8	chr3	56024553	56024722	(142270837)	C	MLT1N2	LTR/ERVL-MaLR	(373)	189	5	2581391
1494	20.9	0.0	3.6	chr3	57793783	57794083	(140501476)	+	AluJb	SINE/Alu	6	295	(17)	2584689
2109	25.0	4.9	0.9	chr3	57810489	57811056	(140484503)	+	L2	LINE/L2	1810	2401	(1018)	2584710
5113	17.2	3.0	1.5	chr3	61361623	61362573	(136932986)	+	L1MB8	LINE/L1	4256	5233	(913)	2590427
2381	17.3	13.3	0.4	chr3	61362574	61363084	(136932475)	+	MER34A1	LTR/ERV1	1	587	(0)	2590428
4326	22.3	3.9	5.9	chr3	64296760	64297995	(133997564)	+	L1M4	LINE/L1	17	1208	(6309)	2595469
502	26.7	13.5	9.6	chr3	67457819	67458286	(130837273)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	2600848
319	24.1	0.0	1.2	chr3	67458287	67458366	(130837193)	C	MIR	SINE/MIR	(52)	210	132	2600849
12898	20.7	4.0	1.8	chr3	72225667	72226933	(126068626)	C	L1M4b	LINE/L1	(5447)	1420	101	2608737
2061	22.2	1.7	1.4	chr3	72928152	72928566	(125366993)	+	L1M4b	LINE/L1	11	426	(6441)	2610228
1288	22.5	8.7	1.5	chr3	73323540	73323910	(124971649)	+	MLT1F	LTR/ERVL-MaLR	182	572	(7)	2611036
528	33.2	1.1	2.6	chr3	73324103	73324291	(124971268)	C	MIRb	SINE/MIR	(12)	256	71	2611037
15	14.5	0.0	0.0	chr3	87201313	87201331	(111094228)	+	(TCTT)n	Simple_repeat	1	19	(0)	2629239
2333	9.6	0.0	0.0	chr3	87201332	87201623	(111093936)	C	AluSx1	SINE/Alu	(0)	312	21	2629240
1469	31.4	9.0	12.2	chr3	94204769	94206903	(104088656)	+	L2a	LINE/L2	1361	3418	(8)	2634002
619	34.2	4.4	0.4	chr3	98717544	98717784	(99577775)	C	MIR	SINE/MIR	(8)	254	4	2639353
217	26.2	4.7	3.2	chr3	98717840	98717902	(99577657)	+	L2c	LINE/L2	3324	3387	(0)	2639344
391	33.3	12.4	3.0	chr3	102141555	102141919	(96153640)	C	L2	LINE/L2	(456)	2963	2560	2644139
277	28.2	1.2	2.3	chr3	102141964	102142050	(96153509)	C	L3	LINE/CR1	(2062)	2037	1952	2644129
5785	20.1	7.0	3.8	chr3	107308528	107309920	(90985639)	C	L1M4b	LINE/L1	(5413)	1454	14	2650656
15141	12.5	3.5	1.5	chr3	107609146	107613181	(90682378)	C	L1MA3	LINE/L1	(2257)	5308	1186	2651123
206	40.6	3.0	3.0	chr3	112555910	112556041	(85739518)	+	MamSINE1	SINE/tRNA-RTE	85	216	(74)	2658001
44	2.4	0.0	0.0	chr3	113955360	113955401	(84340158)	+	(GT)n	Simple_repeat	1	42	(0)	2660041
297	31.4	5.4	7.8	chr3	122595194	122595548	(75700011)	+	L2-3_Crp	LINE/L2	622	966	(1130)	2672282
914	24.6	7.2	12.9	chr3	123198027	123198815	(75096744)	C	L1MEf	LINE/L1	(5023)	1377	638	2673324
11670	10.1	0.6	0.5	chr3	123590291	123591868	(74703691)	C	THE1D-int	LTR/ERVL-MaLR	(51)	1580	1	2673970
1807	15.2	1.6	3.5	chr3	123728223	123728538	(74567021)	+	AluJo	SINE/Alu	3	312	(0)	2674203
4099	21.6	3.1	6.2	chr3	123728539	123728575	(74566984)	+	L1MB7	LINE/L1	158	158	(7359)	2674202
34	0.0	0.0	2.8	chr3	123728576	123728611	(74566948)	+	(AAC)n	Simple_repeat	1	36	(0)	2674204
4099	21.6	3.1	6.2	chr3	123728612	123729376	(74566183)	+	L1MB7	LINE/L1	158	942	(6575)	2674202
208	32.6	19.1	1.7	chr3	125058066	125058302	(73237257)	+	L3b	LINE/CR1	4940	5227	(5)	2676360
275	28.1	4.7	1.2	chr3	125058221	125058303	(73237256)	+	MIR3	SINE/MIR	115	200	(8)	2676361
2161	17.7	7.4	1.0	chr3	126477486	126478204	(71817355)	+	L1M4	LINE/L1	4868	5634	(540)	2678643
671	27.8	7.1	8.0	chr3	127469826	127470138	(70825421)	+	MLT1K	LTR/ERVL-MaLR	33	342	(253)	2680087
468	25.0	12.3	1.8	chr3	127591295	127591461	(70704098)	C	MIRb	SINE/MIR	(81)	187	1	2680326
615	28.5	4.2	5.0	chr3	130432131	130432272	(67863287)	C	MIRb	SINE/MIR	(0)	268	131	2685487
11	29.1	3.7	0.0	chr3	134364168	134364221	(63931338)	+	G-rich	Low_complexity	1	56	(0)	2691340
18	21.8	0.0	0.0	chr3	136522529	136522565	(61772994)	+	(T)n	Simple_repeat	1	37	(0)	2694533
182	25.8	9.6	1.5	chr3	138915350	138915416	(59380143)	C	L2a	LINE/L2	(47)	3379	3307	2698510
550	34.1	1.3	3.0	chr3	139318588	139318823	(58976736)	C	MIR	SINE/MIR	(18)	244	13	2699138
544	27.5	8.2	6.3	chr3	141436316	141436503	(56859056)	C	MER102b	DNA/hAT-Charlie	(7)	334	140	2702295
294	26.1	47.0	2.8	chr3	143067712	143067926	(55227633)	+	L2	LINE/L2	142	451	(2968)	2705136
18	14.6	2.6	0.0	chr3	149577990	149578027	(48717532)	+	(CCTC)n	Simple_repeat	1	39	(0)	2713849
13	3.3	12.9	0.0	chr3	150466661	150466691	(47828868)	+	(CTTCCT)n	Simple_repeat	1	35	(0)	2715265
268	25.0	2.7	2.7	chr3	150466713	150466786	(47828773)	+	L2-3_Crp	LINE/L2	751	824	(1272)	2715266
453	31.2	14.0	3.5	chr3	150607445	150607763	(47687796)	C	L2c	LINE/L2	(8)	3379	3022	2715515
416	33.7	6.2	3.0	chr3	150607850	150608146	(47687413)	C	L2c	LINE/L2	(606)	2813	2507	2715515
3188	22.4	10.8	2.2	chr3	151056661	151057241	(47238318)	C	L1ME1	LINE/L1	(477)	5702	5050	2716263
737	32.9	9.2	4.4	chr3	159825614	159826155	(38469404)	C	L2b	LINE/L2	(1)	3374	2799	2728808
3281	21.7	4.9	2.1	chr3	160618910	160619699	(37675860)	C	L1MC3	LINE/L1	(12)	7773	6961	2730068
1772	19.5	7.7	1.6	chr3	161189788	161190152	(37105407)	+	MLT1B	LTR/ERVL-MaLR	2	390	(0)	2730968
301	24.0	2.6	1.3	chr3	167669080	167669155	(30626404)	+	MLT1L	LTR/ERVL-MaLR	197	273	(337)	2739000
2119	23.6	14.8	2.2	chr3	169439365	169440213	(28855346)	+	L1ME3F	LINE/L1	5235	6210	(33)	2741328
1045	24.9	11.5	1.0	chr3	171402895	171403300	(26892259)	+	HAL1	LINE/L1	1573	2026	(481)	2744462
4319	19.8	1.6	4.1	chr3	171640536	171641406	(26654153)	C	L1MB7	LINE/L1	(6664)	853	5	2744857
2271	11.2	0.6	0.6	chr3	172712416	172712727	(25582832)	C	AluSq2	SINE/Alu	(0)	313	2	2746560
2072	14.7	3.2	1.3	chr3	172734862	172735234	(25560325)	C	L1MC1	LINE/L1	(6)	6327	5948	2746607
4292	24.2	6.9	3.4	chr3	172735235	172735415	(25560144)	C	L1M5	LINE/L1	(2206)	3940	3741	2746603
2484	8.3	4.6	1.3	chr3	173155632	173156008	(25139551)	C	HERVH-int	LTR/ERV1	(0)	7713	7324	2747196
1472	12.3	0.0	0.0	chr3	173156009	173156228	(25139331)	C	HERVH-int	LTR/ERV1	(1894)	5819	5600	2747196
7743	12.2	1.6	1.1	chr3	173156230	173158293	(25137266)	C	HERVH-int	LTR/ERV1	(1290)	5364	3140	2747196
302	28.6	1.6	7.8	chr3	173482626	173482754	(24812805)	C	L2a	LINE/L2	(247)	3179	3059	2747619
1684	30.0	9.3	3.1	chr3	175033515	175034168	(23261391)	+	L2a	LINE/L2	1976	2674	(745)	2749836
360	23.3	7.9	0.8	chr3	177836095	177836211	(20459348)	C	L2a	LINE/L2	(1)	3425	3300	2753869
2098	11.3	6.1	5.6	chr3	178134612	178134986	(20160573)	C	THE1D	LTR/ERVL-MaLR	(0)	381	5	2754278
459	32.8	3.2	0.4	chr3	178256229	178256500	(20039059)	+	L1ME1	LINE/L1	1426	1705	(5398)	2754434
12714	12.8	1.4	1.2	chr3	182312558	182316116	(15979443)	C	L1PA10	LINE/L1	(2933)	3528	13	2760872
302	29.5	9.6	2.7	chr3	183365096	183365318	(14930241)	+	L1MC	LINE/L1	4381	4620	(1526)	2762542
346	29.7	8.0	4.5	chr3	183365509	183366002	(14929557)	+	L1MC4	LINE/L1	4949	5461	(753)	2762528
2451	17.3	5.9	1.9	chr3	183653335	183653805	(14641754)	C	LTR4	LTR/ERV1	(0)	596	106	2763106
2383	11.6	0.0	1.3	chr3	185127429	185127739	(13167820)	C	AluSx	SINE/Alu	(5)	307	1	2765816
869	24.1	2.3	0.9	chr3	185127956	185128169	(13167390)	C	Charlie29a	DNA/hAT-Charlie	(110)	609	393	2765817
18	16.7	7.9	5.2	chr3	185498746	185498834	(12796725)	+	(GATCCCG)n	Simple_repeat	1	96	(0)	2766483
2503	8.1	0.3	0.0	chr3	185726937	185727246	(12568313)	+	AluSx1	SINE/Alu	1	311	(1)	2766969
1057	25.3	15.7	1.7	chr3	185807582	185807995	(12487564)	+	MLT1F	LTR/ERVL-MaLR	16	498	(50)	2767127
785	19.3	0.0	2.2	chr3	185807999	185808133	(12487426)	+	FLAM_A	SINE/Alu	1	132	(10)	2767128
301	32.2	0.8	3.2	chr3	186124965	186125089	(12170470)	C	L2c	LINE/L2	(0)	3387	3266	2767759
277	35.5	10.2	4.1	chr3	187651253	187651399	(10644160)	+	MIRc	SINE/MIR	3	159	(109)	2770483
558	35.9	8.2	2.7	chr3	187651419	187652262	(10643297)	+	L2b	LINE/L2	2091	2984	(435)	2770484
258	30.7	12.6	0.7	chr3	188153224	188153377	(10142182)	+	MIR3	SINE/MIR	34	208	(0)	2771372
196	31.9	7.0	3.0	chr3	189458122	189458286	(8837273)	C	L2c	LINE/L2	(8)	3379	3208	2773597
21	17.3	0.0	0.0	chr3	190120671	190120711	(8174848)	+	(GCA)n	Simple_repeat	1	41	(0)	2774610
19599	19.0	2.6	2.1	chr3	191076006	191080586	(7214973)	+	L1PA11	LINE/L1	7	5130	(2451)	2776025
12	20.5	0.0	9.8	chr3	192409780	192409840	(5885719)	+	G-rich	Low_complexity	1	61	(0)	2777877
14	3.7	10.7	0.0	chr3	192409898	192409925	(5885634)	+	(CGC)n	Simple_repeat	1	31	(0)	2777878
18412	15.6	2.6	3.8	chr3	192538248	192541975	(5753584)	C	L1MA3	LINE/L1	(1142)	6423	2699	2778071
548	24.8	10.0	4.9	chr3	192958064	192958309	(5337250)	C	MIR	SINE/MIR	(2)	260	1	2778775
552	30.9	3.0	1.0	chr3	192958310	192958446	(5337113)	C	L2c	LINE/L2	(63)	3324	3182	2778774
6345	10.4	1.5	7.3	chr3	192973333	192973503	(5322056)	+	L1MA3	LINE/L1	2536	2702	(4863)	2778784
1889	16.4	0.0	1.7	chr3	192973504	192973796	(5321763)	+	AluSz	SINE/Alu	2	289	(23)	2778785
574	27.6	22.1	3.9	chr3	194303068	194303838	(3991721)	C	L2a	LINE/L2	(316)	3110	2082	2780899
291	36.5	6.7	0.9	chr3	194303841	194304166	(3991393)	C	L2-3_Crp	LINE/L2	(1216)	880	535	2780902
654	21.7	11.8	0.0	chr3	194346270	194346426	(3949133)	C	MER115	DNA/hAT-Tip100	(503)	190	13	2780974
739	31.2	0.0	0.0	chr3	194346547	194346751	(3948808)	+	MIR	SINE/MIR	36	240	(22)	2780975
12	25.7	0.0	6.9	chr3	194633185	194633242	(3662317)	+	(GCGCG)n	Simple_repeat	1	58	(0)	2781547
387	30.5	0.8	0.0	chr3	194986571	194986698	(3308861)	+	MLT1K	LTR/ERVL-MaLR	464	592	(3)	2782184
13	13.1	5.6	9.3	chr3	195270948	195271018	(3024541)	+	(GGCCAGC)n	Simple_repeat	1	75	(0)	2782627
2276	8.9	2.6	0.0	chr3	196849902	196850204	(1445355)	C	AluSq2	SINE/Alu	(2)	311	1	2785897
299	30.2	1.6	9.4	chr3	196850293	196850515	(1445044)	+	L1M4a1	LINE/L1	321	540	(2039)	2785898
17	22.6	2.7	5.3	chr3	197003012	197003085	(1292474)	+	G-rich	Low_complexity	1	76	(0)	2786205
289	31.6	8.6	3.5	chr3	197005455	197005772	(1289787)	C	L2-3_Crp	LINE/L2	(982)	1114	779	2786209
589	28.5	7.9	0.9	chr3	197212238	197212460	(1083099)	+	L1MD	LINE/L1	4018	4257	(1889)	2786530
1798	19.4	2.8	1.4	chr3	197212466	197212815	(1082744)	C	MLT1C	LTR/ERVL-MaLR	(112)	355	1	2786531
6010	18.2	6.9	4.2	chr3	197239694	197242805	(1052754)	+	L1M3f	LINE/L1	1240	4445	(3117)	2786571
1576	24.8	12.1	0.9	chr3	197708654	197709230	(586329)	+	Tigger13a	DNA/TcMar-Tigger	121	771	(0)	2787367
21	6.8	0.0	0.0	chr3	197709301	197709331	(586228)	+	(ACC)n	Simple_repeat	1	31	(0)	2787368
319	26.9	13.2	5.2	chr3	197821460	197821612	(473947)	C	L1MC5	LINE/L1	(78)	9226	9060	2787606
1885	17.3	0.3	0.3	chr3	197821679	197821973	(473586)	C	AluJb	SINE/Alu	(17)	295	1	2787607
2460	6.6	0.0	0.3	chr4	498722	499023	(189715532)	C	AluSc	SINE/Alu	(8)	301	1	2789188
8128	20.4	6.3	1.1	chr4	1179480	1181484	(189033071)	+	L1M4	LINE/L1	10	2125	(5392)	2789965
10003	13.7	2.0	0.9	chr4	1997715	2000000	(188214555)	+	L1PA10	LINE/L1	740	3051	(3280)	2790924
3026	22.1	5.1	2.2	chr4	2132187	2132949	(188081606)	+	L1MEf	LINE/L1	898	1678	(4522)	2791131
1363	20.9	25.2	8.3	chr4	2524359	2524584	(187689971)	+	L1MB4	LINE/L1	3296	3546	(2600)	2791720
2438	7.9	0.0	2.5	chr4	2524585	2524902	(187689653)	C	AluY	SINE/Alu	(1)	310	1	2791726
2083	10.4	8.7	1.7	chr4	6739932	6740283	(183474272)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	2798984
12	19.6	0.0	0.0	chr4	6783542	6783570	(183430985)	+	(CTCCC)n	Simple_repeat	1	29	(0)	2799090
24	23.1	4.0	6.2	chr4	6783607	6783731	(183430824)	+	G-rich	Low_complexity	1	130	(0)	2799091
34	7.2	1.6	4.6	chr4	7196599	7196662	(183017893)	+	(CCTCC)n	Simple_repeat	1	65	(0)	2799786
14845	18.0	5.1	1.1	chr4	7403999	7409911	(182804644)	C	L1PB4	LINE/L1	(221)	7364	1238	2800104
2903	29.2	5.3	4.8	chr4	12015665	12017763	(178196792)	+	L1M3c	LINE/L1	1356	3154	(4411)	2807136
5907	12.7	3.0	3.4	chr4	15613444	15614731	(174599824)	C	L1PBa	LINE/L1	(4595)	2268	848	2812940
914	20.6	0.0	2.7	chr4	25223832	25223883	(164990672)	+	AluJr	SINE/Alu	122	173	(139)	2828529
3505	12.0	5.9	10.9	chr4	25223884	25224596	(164989959)	C	LTR76	LTR/ERV1	(0)	675	1	2828530
776	29.8	2.0	9.1	chr4	38160634	38160984	(152053571)	+	MLT1I	LTR/ERVL-MaLR	102	410	(1)	2847301
448	32.6	6.1	9.0	chr4	38160986	38161342	(152053213)	+	L2c	LINE/L2	3041	3386	(1)	2847298
4258	17.2	17.6	0.7	chr4	41287940	41288833	(148925722)	C	LTR27E	LTR/ERV1	(0)	1077	1	2853785
2107	10.9	2.8	17.0	chr4	41294560	41294977	(148919578)	+	LTR18A	LTR/ERVL	1	357	(0)	2853803
323	29.5	4.1	8.6	chr4	47860505	47860656	(142353899)	C	L2c	LINE/L2	(0)	3387	3243	2862892
3013	17.4	6.9	10.9	chr4	48417871	48418753	(141795802)	C	L1MD	LINE/L1	(1762)	4384	3540	2863819
498	35.0	8.7	5.0	chr4	48529996	48530872	(141683683)	+	L2b	LINE/L2	2304	3219	(168)	2863982
25949	4.9	0.5	0.2	chr4	53177527	53183662	(137030893)	+	L1PA4	LINE/L1	1	6152	(3)	2867356
3083	27.6	9.3	4.0	chr4	55376536	55377787	(134836768)	+	L2a	LINE/L2	1805	3137	(289)	2870782
559	25.8	8.0	5.3	chr4	61071766	61072031	(129142524)	+	LTR33	LTR/ERVL	13	286	(229)	2878916
373	28.7	7.6	0.8	chr4	61072182	61072304	(129142251)	+	L2a	LINE/L2	1477	1608	(1811)	2878913
5596	16.1	4.0	3.6	chr4	71107916	71109528	(119105027)	C	L1M4c	LINE/L1	(5088)	2429	578	2891777
405	30.6	2.0	0.7	chr4	73432444	73432591	(116781964)	+	L2b	LINE/L2	2291	2440	(979)	2894886
446	27.6	13.3	0.0	chr4	79525948	79526110	(110688445)	+	MIRb	SINE/MIR	60	247	(21)	2903715
2231	14.2	1.7	1.7	chr4	83378461	83378549	(106836006)	+	MER72	LTR/ERV1	365	454	(268)	2909409
1963	17.4	19.7	4.8	chr4	83378550	83379067	(106835488)	+	LTR18B	LTR/ERVL	1	614	(0)	2909415
1548	19.6	7.8	0.0	chr4	85993698	85993993	(104220562)	C	L1M4	LINE/L1	(7194)	323	3	2913272
269	30.1	0.0	0.0	chr4	86845143	86845215	(103369340)	C	L1M5	LINE/L1	(494)	5630	5558	2914456
1418	17.3	10.1	5.3	chr4	88518469	88518919	(101695636)	C	L1M4b	LINE/L1	(4007)	2860	2386	2917320
1392	20.8	6.3	2.1	chr4	88518921	88519254	(101695301)	C	L1M4b	LINE/L1	(6508)	359	11	2917320
6317	19.2	2.1	2.7	chr4	89346721	89348514	(100866041)	C	L1M3f	LINE/L1	(4360)	3205	1418	2918521
482	27.4	13.1	4.6	chr4	94307477	94307976	(95906579)	+	HAL1	LINE/L1	1689	2261	(246)	2924805
2179	23.7	11.1	3.0	chr4	94670920	94671610	(95542945)	C	LTR41B	LTR/ERVL	(3)	755	2	2925346
504	29.2	6.4	2.9	chr4	95550803	95551009	(94663546)	+	MIR	SINE/MIR	20	243	(25)	2926557
658	22.0	12.6	0.0	chr4	95551056	95551228	(94663327)	+	MER3	DNA/hAT-Charlie	1	198	(11)	2926558
1695	17.3	4.0	3.5	chr4	102316743	102317114	(87897441)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	2935509
1330	26.1	14.1	1.4	chr4	106316918	106317609	(83896946)	C	L2a	LINE/L2	(0)	3426	2636	2940650
1774	16.9	0.9	0.6	chr4	107780626	107780936	(82433619)	C	LTR18C	LTR/ERVL	(13)	332	1	2942501
1235	18.5	2.5	2.1	chr4	109234633	109234870	(80979685)	+	L1M4	LINE/L1	19	257	(7260)	2944652
21779	8.3	1.0	1.8	chr4	119482916	119487688	(70726867)	+	L1PA10	LINE/L1	1610	6337	(16)	2958541
20	12.0	0.0	2.6	chr4	119628968	119629005	(70585550)	+	(GGC)n	Simple_repeat	1	38	(0)	2958742
261	20.3	1.5	1.5	chr4	122046370	122046434	(68168121)	+	MIR	SINE/MIR	183	247	(15)	2961992
1132	25.1	3.8	2.6	chr4	123007673	123007983	(67206572)	C	L1MEc	LINE/L1	(5990)	410	96	2963333
3110	15.6	4.4	0.2	chr4	123093089	123093608	(67120947)	C	MER66C	LTR/ERV1	(12)	543	1	2963454
1827	13.4	3.5	0.0	chr4	123093609	123093885	(67120670)	C	MER66-int	LTR/ERV1	(0)	6676	6390	2963454
808	27.7	12.4	6.7	chr4	124191325	124191711	(66022844)	+	MLT1H	LTR/ERVL-MaLR	122	533	(16)	2964983
956	23.7	0.0	2.6	chr4	139182068	139182262	(51032293)	C	MLT1F	LTR/ERVL-MaLR	(358)	190	1	2984103
7830	14.6	8.9	2.4	chr4	139439300	139440615	(50773940)	C	L1M4c	LINE/L1	(4758)	1626	188	2984635
1367	22.7	15.7	5.3	chr4	140554274	140555166	(49659389)	+	L1M5	LINE/L1	3005	4008	(2138)	2986398
340	28.0	4.3	5.7	chr4	140891256	140891395	(49323160)	C	MIRc	SINE/MIR	(120)	148	11	2986963
718	14.8	3.6	7.5	chr4	140891575	140891720	(49322835)	C	MER2	DNA/TcMar-Tigger	(0)	345	206	2986964
290	25.6	0.0	4.4	chr4	141325926	141326015	(48888540)	C	MLT1C	LTR/ERVL-MaLR	(118)	431	346	2987547
326	31.8	5.3	3.1	chr4	141501543	141501672	(48712883)	+	MIRb	SINE/MIR	35	167	(101)	2987769
1142	26.3	7.2	9.6	chr4	151331276	151331578	(38882977)	+	MLT1H	LTR/ERVL-MaLR	237	533	(16)	3001295
10928	17.4	3.9	1.5	chr4	152853075	152853902	(37360653)	C	L1M2	LINE/L1	(3987)	2862	2010	3003671
1136	22.7	7.0	12.3	chr4	153591784	153592445	(36622110)	C	L1MC4	LINE/L1	(0)	8042	7431	3004932
1283	12.6	0.0	0.0	chr4	158956921	158957095	(31257460)	C	AluSx	SINE/Alu	(1)	311	137	3012154
444	31.3	12.1	4.5	chr4	158957096	158957432	(31257123)	+	L2b	LINE/L2	2732	3098	(277)	3012155
220	27.6	0.0	1.7	chr4	159078259	159078317	(31136238)	+	L2a	LINE/L2	3369	3426	(0)	3012356
469	34.0	6.5	2.4	chr4	159158954	159159161	(31055394)	C	MIRb	SINE/MIR	(51)	217	1	3012515
788	27.7	7.1	3.6	chr4	167541377	167541941	(22672614)	C	L1M4	LINE/L1	(6907)	713	14	3023686
249	30.6	8.1	3.3	chr4	168636944	168637095	(21577460)	+	L3b	LINE/CR1	4782	4941	(291)	3025095
515	27.9	18.0	0.9	chr4	169223663	169223984	(20990571)	C	L2a	LINE/L2	(108)	3318	2930	3026002
15217	19.5	2.6	4.4	chr4	169374717	169378707	(20835848)	+	L1MA4	LINE/L1	402	4284	(3278)	3026242
13	13.2	6.1	0.0	chr4	170026518	170026550	(20188005)	+	G-rich	Low_complexity	1	35	(0)	3027259
947	33.4	7.5	4.5	chr4	170071212	170072187	(20142368)	C	L2a	LINE/L2	(174)	3252	2234	3027331
1161	12.8	11.4	0.0	chr4	172956441	172956635	(17257920)	C	HERVH-int	LTR/ERV1	(1894)	5819	5600	3030950
7818	12.5	1.6	1.2	chr4	172956637	172958703	(17255852)	C	HERVH-int	LTR/ERV1	(2564)	5149	3140	3030950
2083	15.2	8.3	2.2	chr4	174757811	174758215	(15456340)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3033385
4700	20.9	4.1	1.4	chr4	174758216	174758808	(15455747)	+	L1MC3	LINE/L1	7180	7784	(1)	3033384
378	35.5	5.6	1.8	chr4	179976929	179977152	(10237403)	C	MLT1I	LTR/ERVL-MaLR	(121)	290	58	3040182
12714	17.2	4.0	3.8	chr4	183599602	183600674	(6613881)	C	L1M4	LINE/L1	(6425)	1092	4	3045240
1835	8.4	9.7	0.3	chr4	185491018	185491316	(4723239)	C	HSMAR1	DNA/TcMar-Mariner	(957)	330	1	3048372
1003	20.1	1.0	0.0	chr4	185491318	185491516	(4723039)	C	L1MB7	LINE/L1	(7315)	564	364	3048359
7490	7.6	1.0	0.8	chr4	185555722	185557095	(4657460)	C	L1PB1	LINE/L1	(367)	6500	5129	3048481
907	25.8	10.8	4.7	chr4	186216614	186216975	(3997580)	C	MLT1E2	LTR/ERVL-MaLR	(177)	450	64	3049361
15	23.4	2.8	5.4	chr5	1004937	1005008	(180533251)	+	G-rich	Low_complexity	1	74	(0)	3055893
1805	19.2	2.9	4.3	chr5	10246473	10246660	(171291599)	C	L1MB8	LINE/L1	(229)	5949	5757	3066547
234	29.7	14.9	7.5	chr5	10371207	10371338	(171166921)	+	MIRb	SINE/MIR	89	241	(27)	3066794
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
6522	21.1	4.2	1.7	chr5	14101923	14103142	(167435117)	+	L1M4b	LINE/L1	89	1348	(5519)	3071780
21	21.3	0.0	4.6	chr5	14144873	14144937	(167393322)	+	(GCGGCG)n	Simple_repeat	1	65	(0)	3071859
2170	11.2	0.0	2.3	chr5	17246200	17246502	(164291757)	+	AluSx3	SINE/Alu	1	296	(15)	3076505
326	27.5	0.0	0.0	chr5	27389547	27389626	(154148633)	C	MER96	DNA/hAT-Tip100	(78)	97	18	3089835
981	32.3	3.1	0.3	chr5	27389633	27389946	(154148313)	C	MLT2F	LTR/ERVL	(180)	483	161	3089836
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
309	35.0	5.2	0.6	chr5	31860977	31861140	(149677119)	+	MLT1L	LTR/ERVL-MaLR	168	339	(271)	3095717
404	21.3	1.1	1.1	chr5	31861235	31861329	(149676930)	+	MLT1L	LTR/ERVL-MaLR	498	592	(18)	3095717
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
6288	9.8	3.4	3.2	chr5	32309323	32309661	(149228598)	+	L1MA3	LINE/L1	5098	5440	(865)	3096586
896	5.6	0.0	0.0	chr5	32309662	32309768	(149228491)	+	U6	snRNA	1	107	(0)	3096587
6288	9.4	4.6	5.3	chr5	32309769	32310032	(149228227)	+	L1MA3	LINE/L1	5441	5668	(637)	3096586
5661	17.4	4.7	4.8	chr5	32339126	32340078	(149198181)	C	MER57-int	LTR/ERV1	(3711)	3826	2773	3096642
228	26.2	1.2	5.6	chr5	32429303	32429391	(149108868)	+	L1ME3A	LINE/L1	415	499	(6604)	3096823
382	7.7	0.0	1.9	chr5	32429392	32429443	(149108816)	+	AluSx	SINE/Alu	97	147	(165)	3096824
249	32.5	3.3	2.5	chr5	32429444	32429563	(149108696)	+	L1ME3A	LINE/L1	459	579	(6524)	3096823
502	13.0	16.0	0.0	chr5	32429566	32429665	(149108594)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	118	3096825
14	14.4	3.1	0.0	chr5	32638630	32638661	(148899598)	+	GA-rich	Low_complexity	1	33	(0)	3097254
10408	20.9	6.2	4.3	chr5	33187103	33189782	(148348477)	C	L1M4b	LINE/L1	(3704)	3302	664	3097943
470	29.4	18.0	3.4	chr5	34827760	34827995	(146710264)	C	L2c	LINE/L2	(11)	3376	3099	3100469
8412	12.6	1.5	2.0	chr5	36901809	36903430	(144634829)	C	L1PA15	LINE/L1	(562)	5603	3990	3103518
1925	28.5	13.0	9.8	chr5	38199365	38200689	(143337570)	+	ERVL-E-int	LTR/ERVL	2722	4095	(1572)	3105727
12	19.5	2.9	0.0	chr5	38846052	38846086	(142692173)	+	(CGCCCCG)n	Simple_repeat	1	36	(0)	3106772
231	36.2	5.5	2.1	chr5	41699775	41699915	(139838344)	C	MIRb	SINE/MIR	(122)	146	1	3110730
194	33.3	10.4	0.0	chr5	41747412	41747480	(139790779)	C	L2c	LINE/L2	(13)	3362	3286	3110784
2237	11.4	0.0	0.7	chr5	43574739	43575037	(137963222)	C	AluSq2	SINE/Alu	(16)	297	1	3113285
2531	17.8	2.8	4.5	chr5	43575038	43575275	(137962984)	C	LTR49-int	LTR/ERV1	(3400)	2931	2704	3113279
797	12.4	9.0	0.0	chr5	43607620	43607740	(137930519)	C	AluSx	SINE/Alu	(179)	133	1	3113342
401	32.1	5.4	2.8	chr5	44828729	44828872	(136709387)	C	MIR3	SINE/MIR	(44)	164	17	3114743
2602	28.9	8.2	7.5	chr5	50906018	50907377	(130630882)	C	L2a	LINE/L2	(241)	3185	1821	3117087
17	18.6	5.3	6.2	chr5	54517730	54517805	(127020454)	+	(CGG)n	Simple_repeat	1	80	(0)	3121856
240	27.3	1.8	0.0	chr5	54894864	54894918	(126643341)	+	Plat_L3	LINE/CR1	3525	3580	(6)	3122409
18	22.0	2.9	4.2	chr5	55173295	55173363	(126364896)	+	(CCCCG)n	Simple_repeat	1	71	(0)	3122809
271	24.3	4.6	4.0	chr5	55700483	55700632	(125837627)	+	L1MEd	LINE/L1	1923	2073	(5013)	3123723
1553	24.8	11.2	20.4	chr5	55700639	55701003	(125837256)	+	L2	LINE/L2	1923	2325	(1094)	3123725
2368	12.7	0.0	0.0	chr5	56712255	56712561	(124825698)	+	AluSx	SINE/Alu	1	307	(5)	3125454
27	21.4	1.7	8.2	chr5	56815642	56815761	(124722498)	+	(GGC)n	Simple_repeat	1	122	(0)	3125610
441	28.5	10.1	1.3	chr5	56904731	56904883	(124633376)	C	LTR33	LTR/ERVL	(11)	504	337	3125744
509	27.2	14.1	1.2	chr5	56904957	56905116	(124633143)	C	LTR33	LTR/ERVL	(331)	184	1	3125744
703	24.1	15.7	0.8	chr5	60722860	60723097	(120815162)	C	L1MC4	LINE/L1	(1187)	1590	1420	3131233
9527	18.6	5.8	0.8	chr5	60994570	60997057	(120541202)	C	L1MA1	LINE/L1	(4788)	2777	19	3131627
438	28.4	14.9	1.0	chr5	61204912	61205107	(120333152)	+	L2	LINE/L2	1883	2110	(1309)	3131908
964	16.8	2.4	2.4	chr5	61205118	61205325	(120332934)	+	SVA_F	Retroposon/SVA	458	665	(710)	3131911
317	32.9	10.0	9.6	chr5	64744758	64745006	(116793253)	C	L1MEd	LINE/L1	(6523)	580	331	3136834
23404	10.3	1.1	0.9	chr5	64934101	64940576	(116597683)	C	L1PA7	LINE/L1	(1)	6468	1	3137127
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
15	0.0	0.0	0.0	chr5	66596841	66596859	(114941400)	+	(GCC)n	Simple_repeat	1	19	(0)	3139672
12	13.9	0.0	0.0	chr5	66596999	66597022	(114941237)	+	(AGG)n	Simple_repeat	1	24	(0)	3139673
180	30.2	1.9	1.9	chr5	66691078	66691131	(114847128)	C	MIR	SINE/MIR	(152)	110	57	3139808
299	35.4	0.7	0.0	chr5	66981699	66981842	(114556417)	C	L4_C_Mam	LINE/RTE-X	(1458)	3680	3536	3140215
525	29.8	4.3	0.0	chr5	67170916	67171113	(114367146)	+	L2c	LINE/L2	2686	2892	(527)	3140442
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
1837	17.3	0.0	1.9	chr5	69474224	69474530	(112063729)	C	AluJr4	SINE/Alu	(11)	301	1	3144129
305	33.3	1.7	0.0	chr5	71482270	71482446	(110055813)	C	L1MEf	LINE/L1	(6119)	281	102	3147510
250	23.4	0.0	0.0	chr5	72562811	72562857	(108975402)	C	MER5B	DNA/hAT-Charlie	(45)	133	87	3149170
456	27.1	3.6	0.6	chr5	72563040	72563199	(108975060)	+	MIR	SINE/MIR	84	248	(14)	3149171
1549	28.5	8.5	3.3	chr5	74120710	74121409	(107416850)	+	MER21C	LTR/ERVL	9	841	(97)	3151527
947	32.5	13.2	4.4	chr5	74121440	74122164	(107416095)	C	LTR78B	LTR/ERV1	(470)	826	29	3151526
539	25.0	0.0	0.7	chr5	74967369	74967509	(106570750)	+	Tigger13a	DNA/TcMar-Tigger	128	267	(504)	3152846
231	38.6	0.0	0.0	chr5	75612905	75612974	(105925285)	C	L2	LINE/L2	(1176)	2243	2174	3153816
281	32.9	6.4	3.7	chr5	75612997	75613346	(105924913)	C	L2-3_Crp	LINE/L2	(1176)	920	561	3153817
296	23.9	13.3	6.4	chr5	77087603	77087727	(104450532)	C	MLT1I	LTR/ERVL-MaLR	(16)	395	261	3156160
2394	11.4	0.0	2.2	chr5	77900237	77900553	(103637706)	+	AluSx1	SINE/Alu	1	310	(2)	3157354
12244	12.3	2.6	1.6	chr5	78064914	78067071	(103471188)	+	L1PA10	LINE/L1	10	2209	(4274)	3157562
3705	22.5	5.6	11.7	chr5	78427474	78429534	(103108725)	C	L1MB8	LINE/L1	(484)	6489	4586	3158118
1107	24.4	5.9	1.8	chr5	78429556	78429830	(103108429)	C	L1M4a2	LINE/L1	(2361)	295	9	3158121
1293	23.8	7.8	3.5	chr5	78618330	78618734	(102919525)	C	MLT1H1	LTR/ERVL-MaLR	(65)	490	67	3158338
214	26.9	0.0	0.0	chr5	78634715	78634766	(102903493)	C	MIR3	SINE/MIR	(91)	117	66	3158358
2139	11.7	6.0	2.2	chr5	78690011	78690376	(102847883)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3158439
6397	19.9	2.5	1.9	chr5	78898803	78900706	(102637553)	C	L1M3f	LINE/L1	(4411)	3154	1249	3158757
492	23.6	15.8	0.7	chr5	79395771	79395915	(102142344)	+	MIRb	SINE/MIR	98	268	(0)	3159669
5667	21.3	6.9	1.8	chr5	80466708	80468005	(101070254)	+	L1M4	LINE/L1	1	1370	(6147)	3161620
54	0.0	0.0	0.0	chr5	81736144	81736189	(99802070)	+	(AC)n	Simple_repeat	1	46	(0)	3163544
271	22.4	1.3	3.3	chr5	81736295	81736378	(99801881)	+	L2a	LINE/L2	3302	3426	(0)	3163545
1660	15.9	19.2	2.0	chr5	81819691	81820042	(99718217)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	3163670
4403	7.9	0.8	2.9	chr5	82272250	82272903	(99265356)	C	Harlequin-int	LTR/ERV1	(5995)	901	262	3164377
2563	8.7	0.5	1.8	chr5	82272899	82273283	(99264976)	C	Harlequin-int	LTR/ERV1	(6516)	380	1	3164378
12459	15.4	4.0	3.7	chr5	87025732	87030945	(94507314)	C	L1PA10	LINE/L1	(1296)	5377	1	3170556
13354	7.5	1.5	0.3	chr5	91045092	91047111	(90491148)	+	L1PB	LINE/L1	3545	5588	(563)	3175548
319	25.8	2.9	15.9	chr5	91847807	91847963	(89690296)	C	Tigger19b	DNA/TcMar-Tigger	(334)	216	81	3176798
368	26.3	7.0	0.0	chr5	93174946	93175078	(88363181)	+	L2a	LINE/L2	1050	1192	(2227)	3178358
2787	29.7	10.1	3.2	chr5	93175096	93176856	(88361403)	+	L2a	LINE/L2	1518	3426	(0)	3178358
2445	28.8	7.3	12.6	chr5	95380356	95381894	(86156365)	C	L2a	LINE/L2	(169)	3257	1925	3181080
2227	24.6	6.4	5.1	chr5	95557764	95558336	(85979923)	+	L1MB8	LINE/L1	6	586	(6281)	3181317
3220	25.4	8.3	4.7	chr5	100181788	100182775	(81355484)	C	L1M4	LINE/L1	(6486)	1031	5	3187406
1686	22.1	3.5	2.4	chr5	100440777	100441202	(81097057)	+	MSTB1	LTR/ERVL-MaLR	1	431	(1)	3187738
809	33.6	4.9	3.7	chr5	104152238	104152748	(77385511)	+	L1M8	LINE/L1	1	523	(1832)	3192360
27	23.0	0.0	1.4	chr5	107451593	107451661	(74086598)	+	(TGAA)n	Simple_repeat	1	69	(0)	3196364
4433	7.0	1.9	0.2	chr5	107451714	107452325	(74085934)	+	L1PA8A	LINE/L1	5482	6104	(27)	3196365
1309	25.5	18.1	8.3	chr5	110865328	110866029	(70672230)	C	LTR50	LTR/ERVL	(2)	793	8	3200740
24	15.1	0.0	5.3	chr5	111224406	111224462	(70313797)	+	(GGC)n	Simple_repeat	1	57	(0)	3201163
317	26.4	0.0	7.5	chr5	113480346	113480375	(68057884)	+	L1M5	LINE/L1	5695	5724	(400)	3204353
1354	23.2	17.2	8.1	chr5	113480376	113480770	(68057489)	+	Kanga1a	DNA/TcMar-Tc2	1	489	(265)	3204354
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
194	40.0	7.7	2.5	chr5	113537733	113537891	(68000368)	+	L2	LINE/L2	2410	2577	(842)	3204440
647	36.5	9.6	4.9	chr5	113537949	113538541	(67999718)	+	L2	LINE/L2	2433	3056	(363)	3204441
3504	32.8	5.4	2.0	chr5	115604301	115605777	(65932482)	+	ERVL-E-int	LTR/ERVL	3669	5197	(470)	3207036
1949	22.3	5.4	0.7	chr5	115605817	115606362	(65931897)	+	L1M5	LINE/L1	3187	3759	(2387)	3207037
583	16.8	4.0	0.0	chr5	115786056	115786150	(65752109)	+	AluJo	SINE/Alu	1	99	(213)	3207283
4531	26.8	3.8	1.5	chr5	116998495	117000000	(64538259)	+	L1M5	LINE/L1	2349	3890	(2256)	3209004
2726	13.8	1.6	5.7	chr5	117713347	117713854	(63824405)	+	LTR76	LTR/ERV1	187	673	(2)	3209952
2645	14.5	1.2	0.2	chr5	117713889	117714316	(63823943)	+	L1PREC2	LINE/L1	4660	5091	(1055)	3209953
10005	20.3	7.3	2.3	chr5	119510529	119512749	(62025510)	+	L1M4b	LINE/L1	11	2351	(4516)	3212414
271	34.3	0.0	5.3	chr5	119584910	119585060	(61953199)	+	ERV3-16A3_LTR	LTR/ERVL	278	420	(2)	3212515
330	32.3	5.2	6.3	chr5	119585201	119585375	(61952884)	C	MLT1J	LTR/ERVL-MaLR	(336)	176	4	3212516
567	36.2	2.3	2.7	chr5	125100599	125100856	(56437403)	C	LTR81A	LTR/Gypsy	(377)	973	717	3219615
1448	12.3	12.4	11.4	chr5	125312446	125312821	(56225438)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	3219889
308	25.7	1.3	0.0	chr5	125581451	125581524	(55956735)	C	MIR	SINE/MIR	(0)	262	188	3220220
2498	7.0	0.3	0.6	chr5	126733171	126733482	(54804777)	+	AluY	SINE/Alu	1	311	(0)	3221838
561	30.7	2.6	2.6	chr5	127041734	127041927	(54496332)	+	MIRc	SINE/MIR	20	213	(55)	3222348
730	29.0	19.2	2.2	chr5	127230964	127231711	(54306548)	+	L2a	LINE/L2	2501	3426	(0)	3222565
1894	25.2	19.1	2.0	chr5	127623228	127624265	(53913994)	+	HAL1	LINE/L1	623	1859	(648)	3223096
22330	9.0	2.3	0.3	chr5	127727505	127728900	(53809359)	+	L1PA10	LINE/L1	1102	2512	(3819)	3223213
33	2.9	0.0	0.0	chr5	128084240	128084274	(53453985)	+	(GCG)n	Simple_repeat	1	35	(0)	3223725
1960	19.4	15.2	1.3	chr5	129048271	129048886	(52489373)	C	ERVL-int	LTR/ERVL	(2022)	3692	2991	3224876
448	30.7	16.1	5.1	chr5	129083376	129083901	(52454358)	C	L2c	LINE/L2	(1209)	2210	1616	3224917
469	34.7	9.2	1.0	chr5	129413582	129413869	(52124390)	+	L2	LINE/L2	1793	2106	(1313)	3225291
334	34.6	3.6	0.6	chr5	129413880	129414039	(52124220)	+	L1MA7	LINE/L1	790	954	(5699)	3225292
20312	16.2	3.5	1.8	chr5	132037729	132044663	(49493596)	C	L1PA13	LINE/L1	(4)	7594	1	3228850
5840	23.5	11.6	10.7	chr5	132305096	132305804	(49232455)	+	L1MB7	LINE/L1	1503	2325	(4542)	3229163
769	29.0	5.8	3.2	chr5	132341958	132342437	(49195822)	+	L1M5	LINE/L1	4976	5470	(654)	3229231
2456	22.4	9.2	4.0	chr5	132342438	132343162	(49195097)	C	MER21C	LTR/ERVL	(62)	876	9	3229233
972	20.3	0.0	2.8	chr5	134398892	134399068	(47139191)	+	FAM	SINE/Alu	14	185	(0)	3232475
12	18.5	3.6	6.9	chr5	134526881	134526936	(47011323)	+	(CGGCG)n	Simple_repeat	1	58	(0)	3232770
12	30.2	2.8	2.7	chr5	134905078	134905149	(46633110)	+	(GGCCGGC)n	Simple_repeat	1	74	(0)	3233621
729	25.6	6.4	13.6	chr5	135707315	135707925	(45830334)	+	L2a	LINE/L2	2824	3413	(13)	3234674
8334	19.8	7.0	2.0	chr5	135970345	135972684	(45565575)	C	L1M4	LINE/L1	(161)	2916	5	3235035
189	28.4	9.9	4.4	chr5	136934628	136934741	(44603518)	+	L3	LINE/CR1	120	240	(3859)	3236300
2463	12.7	7.6	0.9	chr5	137247610	137248029	(44290230)	C	MSTB2	LTR/ERVL-MaLR	(7)	450	1	3236704
1293	26.5	13.9	6.6	chr5	138890252	138890905	(42647354)	C	MER21C	LTR/ERVL	(103)	835	126	3239776
4913	19.4	16.1	7.9	chr5	138940242	138941375	(42596884)	C	L1MD	LINE/L1	(1214)	4932	3680	3239852
3635	11.1	1.4	8.8	chr5	139232118	139232581	(42305678)	C	MER61E	LTR/ERV1	(156)	413	1	3240351
545	15.6	2.0	12.0	chr5	139232582	139232668	(42305591)	+	FLAM_C	SINE/Alu	55	133	(0)	3240350
3511	15.6	4.3	3.4	chr5	139271200	139271518	(42266741)	C	L1MB7	LINE/L1	(358)	5826	5498	3240458
2741	8.2	0.5	0.3	chr5	139526347	139526725	(42011534)	+	Harlequin-int	LTR/ERV1	1	380	(6516)	3240951
4312	8.7	1.6	3.1	chr5	139526721	139527362	(42010897)	+	Harlequin-int	LTR/ERV1	262	893	(6003)	3240952
6515	24.4	9.1	3.0	chr5	140013559	140014234	(41524025)	+	L2a	LINE/L2	1812	2561	(858)	3241862
2030	23.5	8.9	3.7	chr5	140027284	140027500	(41510759)	+	MLT1G3-int	LTR/ERVL-MaLR	653	866	(623)	3241881
1678	9.2	16.3	1.1	chr5	140027501	140027785	(41510474)	+	MER44A	DNA/TcMar-Tigger	2	338	(1)	3241883
266	31.7	7.8	4.7	chr5	140671817	140671965	(40866294)	+	MIRb	SINE/MIR	37	190	(78)	3243042
331	33.6	1.8	1.8	chr5	140672003	140672114	(40866145)	C	MIRb	SINE/MIR	(1)	267	156	3243043
21	17.6	1.9	1.9	chr5	141636810	141636862	(39901397)	+	(CCCGCCG)n	Simple_repeat	1	54	(0)	3244320
17	28.5	0.0	0.0	chr5	141878302	141878356	(39659903)	+	(GGCTGG)n	Simple_repeat	1	55	(0)	3244779
404	31.4	0.8	2.4	chr5	142303842	142303968	(39234291)	+	MIR3	SINE/MIR	35	159	(49)	3245689
256	22.7	9.1	9.1	chr5	142303970	142304090	(39234169)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	47	3245690
3752	21.5	5.9	5.5	chr5	143291675	143292946	(38245313)	C	L1MCb	LINE/L1	(5353)	1398	42	3247459
9082	19.8	7.2	7.2	chr5	143362036	143362360	(38175899)	+	L1MB7	LINE/L1	6	344	(7173)	3247547
374	27.2	4.6	2.8	chr5	143383136	143383241	(38155018)	+	L2a	LINE/L2	3299	3406	(20)	3247570
306	26.7	9.2	8.8	chr5	143811595	143811832	(37726427)	C	L2a	LINE/L2	(1)	3425	3187	3248297
480	29.9	4.0	3.0	chr5	143811835	143812034	(37726225)	C	L2a	LINE/L2	(568)	2851	2650	3248297
185	38.1	2.9	2.2	chr5	145824064	145824200	(35714059)	C	MIR3	SINE/MIR	(36)	172	35	3251350
12	17.0	8.3	1.9	chr5	145824288	145824335	(35713924)	+	(GCAGAAG)n	Simple_repeat	1	52	(0)	3251351
215	27.1	1.4	5.4	chr5	148723248	148723321	(32814938)	+	L2c	LINE/L2	3245	3315	(72)	3256325
301	31.2	3.1	4.6	chr5	149537611	149537741	(32000518)	+	MER5A	DNA/hAT-Charlie	61	189	(0)	3257940
1189	25.9	11.2	1.4	chr5	149610837	149611329	(31926930)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	1	3258124
16	18.4	7.4	4.6	chr5	150357906	150357986	(31180273)	+	(GCGGCCC)n	Simple_repeat	1	87	(0)	3259764
192	20.8	7.0	1.9	chr5	150358028	150358081	(31180178)	+	MIR3	SINE/MIR	103	159	(49)	3259765
363	34.8	6.8	4.5	chr5	151368839	151369304	(30168955)	+	ERV24B_Prim-int	LTR/ERV1	1424	1893	(5682)	3261742
939	16.8	4.0	0.0	chr5	151829401	151829590	(29708669)	+	L1MB7	LINE/L1	1	198	(7319)	3262700
2196	17.7	8.9	0.6	chr5	151829594	151830075	(29708184)	C	L1MB8	LINE/L1	(3)	6175	5650	3262701
183	36.0	0.0	4.3	chr5	154334834	154334926	(27203333)	+	MamSINE1	SINE/tRNA-RTE	7	95	(195)	3266921
809	21.5	4.8	1.1	chr5	154368041	154368219	(27170040)	C	MER5A	DNA/hAT-Charlie	(3)	186	1	3266985
251	20.0	3.5	1.8	chr5	154368242	154368297	(27169962)	+	L2b	LINE/L2	3314	3370	(5)	3266986
444	9.9	0.0	2.7	chr5	154368385	154368457	(27169802)	+	L1MB8	LINE/L1	6108	6178	(0)	3266987
347	28.0	1.9	5.5	chr5	154724200	154724339	(26813920)	C	MIR	SINE/MIR	(7)	261	116	3267888
2250	10.1	0.7	1.0	chr5	154827023	154827329	(26710930)	+	AluSx	SINE/Alu	1	306	(6)	3268124
218	29.2	5.8	1.5	chr5	154827338	154827403	(26710856)	C	L2a	LINE/L2	(1485)	1934	1866	3268117
46	0.0	0.0	0.0	chr5	154827422	154827460	(26710799)	+	(TG)n	Simple_repeat	1	39	(0)	3268125
15	27.4	0.0	0.0	chr5	157266218	157266265	(24271994)	+	G-rich	Low_complexity	1	48	(0)	3272404
1817	24.1	6.1	3.6	chr5	157999165	157999719	(23538540)	C	L1MC4	LINE/L1	(124)	7918	7349	3273821
551	29.8	3.9	3.0	chr5	158842460	158842660	(22695599)	+	MIRb	SINE/MIR	2	204	(64)	3275191
3175	18.6	7.7	0.4	chr5	172247540	172248305	(9289954)	+	L1M4	LINE/L1	2317	3143	(3003)	3297011
2452	10.3	0.0	0.0	chr5	172248308	172248599	(9289660)	+	AluSx4	SINE/Alu	1	292	(18)	3297012
280	32.9	4.0	0.4	chr5	172437428	172437564	(9100695)	C	MIRb	SINE/MIR	(127)	141	1	3297432
93	0.0	0.0	7.2	chr5	172978608	172978746	(8559513)	+	(AGAA)n	Simple_repeat	1	139	(0)	3298656
244	13.5	0.0	2.6	chr5	172978761	172978798	(8559461)	C	Charlie1b	DNA/hAT-Charlie	(473)	50	14	3298657
346	27.7	1.0	0.0	chr5	174363935	174364035	(7174224)	+	L1ME3G	LINE/L1	370	471	(453)	3301361
7598	19.6	4.8	7.5	chr5	174785161	174786464	(6751795)	C	L1MB5	LINE/L1	(5594)	1923	636	3302228
8834	19.4	7.3	2.1	chr5	175148488	175149221	(6389038)	+	L1MC3	LINE/L1	7135	7899	(304)	3302877
252	30.1	9.4	3.8	chr5	175594190	175594610	(5943649)	+	L2a	LINE/L2	627	1073	(1023)	3303717
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
2289	25.7	14.6	7.6	chr5	177317094	177318607	(4219652)	C	MER21-int	LTR/ERVL	(1106)	3085	1452	3307164
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
11	9.7	8.6	2.6	chr5	177446973	177447007	(4091252)	+	G-rich	Low_complexity	1	38	(0)	3307434
12	21.7	0.0	0.0	chr5	177447121	177447152	(4091107)	+	GA-rich	Low_complexity	1	32	(0)	3307435
16	14.2	5.1	0.0	chr5	178113402	178113440	(3424819)	+	G-rich	Low_complexity	1	41	(0)	3308587
18	24.7	7.6	1.0	chr5	178113595	178113686	(3424573)	+	(CCGGCG)n	Simple_repeat	1	99	(0)	3308588
13	26.1	2.2	0.0	chr5	178205115	178205160	(3333099)	+	G-rich	Low_complexity	1	47	(0)	3308795
12	22.0	4.8	0.0	chr5	178205185	178205226	(3333033)	+	(CGCTGG)n	Simple_repeat	1	44	(0)	3308796
19	13.0	4.8	0.0	chr5	178205276	178205317	(3332942)	+	(GCCAGG)n	Simple_repeat	1	44	(0)	3308797
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
13	7.5	0.0	8.8	chr5	179733063	179733096	(1805163)	+	(CCGGCC)n	Simple_repeat	1	34	(0)	3311472
25	18.1	1.5	3.0	chr5	179806880	179806945	(1731314)	+	G-rich	Low_complexity	1	67	(0)	3311614
5035	21.8	3.9	2.0	chr5	180091940	180092617	(1445642)	C	L1M4b	LINE/L1	(6065)	802	118	3312067
2481	6.5	0.7	1.0	chr5	180092618	180092924	(1445335)	+	AluSx3	SINE/Alu	1	306	(5)	3312069
1025	12.2	0.7	0.7	chr5	180434277	180434413	(1103846)	C	AluSg	SINE/Alu	(171)	139	2	3312631
11	27.9	1.6	4.8	chr5	180619104	180619165	(919094)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3312984
17	26.4	4.6	1.5	chr5	180619152	180619216	(919043)	+	(GC)n	Simple_repeat	1	68	(0)	3312985
12	17.5	3.1	0.0	chr5	180649090	180649121	(889138)	+	(CGGCG)n	Simple_repeat	1	33	(0)	3313019
16	16.8	1.9	5.7	chr5	180649257	180649308	(888951)	+	(GGCCC)n	Simple_repeat	1	53	(0)	3313020
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
734	0.0	0.0	0.0	chr5	181187701	181187782	(350477)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3313822
328	29.6	11.4	4.1	chr5	181205822	181206385	(331874)	+	L2b	LINE/L2	2921	3370	(5)	3313849
660	0.0	0.0	0.0	chr5	181222394	181222467	(315792)	C	tRNA-Val-GTG	tRNA	(2)	74	1	3313890
12101	18.0	4.1	3.2	chr6	2326301	2326933	(168479046)	C	L1M4c	LINE/L1	(3516)	2860	2208	3317259
700	21.8	0.7	0.0	chr6	3971562	3971694	(166834285)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	3319731
333	28.3	10.8	2.9	chr6	4917186	4917356	(165888623)	+	L4_A_Mam	LINE/RTE-X	4620	4805	(185)	3321214
19	10.8	0.0	0.0	chr6	6811688	6811718	(163994261)	+	(GAG)n	Simple_repeat	1	31	(0)	3323954
16	23.4	2.5	0.0	chr6	7819103	7819142	(162986837)	+	(GT)n	Simple_repeat	1	41	(0)	3325772
403	16.1	9.0	0.0	chr6	8035364	8035444	(162770535)	+	L1MA4	LINE/L1	2358	2446	(3879)	3326053
403	17.6	0.0	0.0	chr6	8035446	8035519	(162770460)	C	L1M2	LINE/L1	(3435)	2708	2635	3326058
11839	16.3	9.1	2.2	chr6	8035539	8038504	(162767475)	+	L1MA4	LINE/L1	2468	5644	(838)	3326053
3039	22.8	6.9	8.6	chr6	8047445	8048730	(162757249)	C	L1MC5	LINE/L1	(794)	8510	7614	3326073
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
14	14.8	2.4	2.3	chr6	13392754	13392773	(157413206)	+	GA-rich	Low_complexity	1	20	(0)	3334178
1924	16.7	0.0	2.0	chr6	13392774	13393072	(157412907)	+	AluJr	SINE/Alu	1	293	(19)	3334179
216	32.9	8.7	8.9	chr6	14781749	14782072	(156023907)	C	L2c	LINE/L2	(12)	3363	3041	3336542
185	28.6	0.0	0.0	chr6	15580778	15580819	(155225160)	+	L3b	LINE/CR1	4545	4586	(646)	3338108
266	38.7	2.8	1.4	chr6	15580858	15580996	(155224983)	+	L3	LINE/CR1	3580	3720	(379)	3338109
1742	25.4	0.7	0.2	chr6	16228761	16229166	(154576813)	C	HERV3-int	LTR/ERV1	(5950)	2476	2069	3339192
13	21.6	2.2	2.2	chr6	16229246	16229313	(154576666)	+	(CTTTCCA)n	Simple_repeat	1	68	(0)	3339194
236	12.7	12.7	1.8	chr6	18009626	18009681	(152796298)	C	MLT2F	LTR/ERVL	(600)	63	1	3342246
268	30.2	7.8	1.0	chr6	18009769	18009864	(152796115)	C	AluJr4	SINE/Alu	(18)	294	192	3342248
3354	12.0	0.0	5.8	chr6	18090195	18090715	(152715264)	C	MER61E	LTR/ERV1	(78)	491	1	3342415
25146	6.2	3.0	0.3	chr6	18228390	18234361	(152571618)	+	L1PA5	LINE/L1	3	6154	(0)	3342678
258	26.9	4.9	0.0	chr6	18405912	18405989	(152399990)	C	L3	LINE/CR1	(1)	4098	4017	3343016
960	31.1	7.0	0.2	chr6	20814745	20815160	(149990819)	C	L1MEc	LINE/L1	(5923)	477	32	3346665
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
752	1.2	0.0	0.0	chr6	26327589	26327673	(144478306)	+	tRNA-Ser-TCY	tRNA	1	85	(0)	3355033
679	0.0	0.0	0.0	chr6	26532917	26532990	(144272989)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3355416
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
686	0.0	0.0	0.0	chr6	26538054	26538127	(144267852)	+	tRNA-Val-GTG	tRNA	1	74	(2)	3355428
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
973	27.9	3.7	8.4	chr6	27341181	27341726	(143464253)	+	MLT1G1	LTR/ERVL-MaLR	1	578	(1)	3356745
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
2277	12.7	0.0	0.9	chr6	27602220	27602534	(143203445)	C	AluSx1	SINE/Alu	(0)	312	1	3357201
595	0.0	0.0	22.2	chr6	27602568	27602675	(143203304)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357202
633	2.7	0.0	0.0	chr6	27668583	27668657	(143137322)	+	tRNA-Ile-ATT	tRNA	1	75	(2)	3357335
679	0.0	0.0	0.0	chr6	27684695	27684768	(143121211)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3357369
7732	20.5	7.3	4.2	chr6	28372991	28374896	(142431083)	C	L1MDa	LINE/L1	(942)	5595	3607	3358526
2416	6.0	1.3	0.0	chr6	28790370	28790670	(142015309)	+	AluSp	SINE/Alu	2	306	(7)	3359224
15	14.4	0.0	0.0	chr6	28790694	28790718	(142015261)	+	(A)n	Simple_repeat	1	25	(0)	3359225
661	1.4	0.0	0.0	chr6	28790722	28790794	(142015185)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	3359226
722	0.0	0.0	0.0	chr6	28943622	28943703	(141862276)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3359515
4736	16.5	7.8	1.9	chr6	29054943	29055953	(141750026)	C	L1MA9	LINE/L1	(6)	6306	5224	3359694
4545	23.7	3.0	4.5	chr6	29466027	29467199	(141338780)	+	L1M4	LINE/L1	3	1156	(6361)	3360144
6197	7.1	3.5	1.6	chr6	31185415	31186290	(139619689)	C	Harlequin-int	LTR/ERV1	(6003)	893	1	3362970
2350	29.6	6.3	6.1	chr6	31456841	31458066	(139347913)	C	L1M4	LINE/L1	(6280)	1237	9	3363341
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
3959	23.4	3.6	0.5	chr6	33036154	33036935	(137769044)	C	L1M4	LINE/L1	(6710)	1169	363	3365782
4451	16.1	12.9	3.3	chr6	33100885	33101845	(137704134)	C	MER11C	LTR/ERVK	(4)	1067	1	3365845
1224	22.1	3.7	11.7	chr6	34716892	34717118	(136088861)	+	L1ME3Cz	LINE/L1	226	432	(565)	3369001
37	7.2	1.7	1.6	chr6	34889502	34889561	(135916418)	+	(GGC)n	Simple_repeat	1	61	(0)	3369412
306	35.0	1.6	0.0	chr6	34960859	34960981	(135844998)	C	MIR	SINE/MIR	(121)	141	17	3369537
197	27.7	5.1	5.9	chr6	35181755	35181873	(135624106)	C	L2b	LINE/L2	(20)	3355	3238	3369861
239	31.2	4.0	0.0	chr6	35182034	35182129	(135623850)	C	L2a	LINE/L2	(14)	3412	3313	3369862
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
496	25.3	7.2	2.5	chr6	35360421	35360578	(135445401)	C	MIRb	SINE/MIR	(84)	184	19	3370203
913	29.5	8.5	4.1	chr6	35703634	35704124	(135101855)	+	MLT1N2	LTR/ERVL-MaLR	48	562	(0)	3370961
9508	11.0	11.5	0.3	chr6	35908152	35909597	(134896382)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3371418
10968	10.9	3.9	6.7	chr6	35910282	35911433	(134894546)	+	Tigger1	DNA/TcMar-Tigger	658	1822	(596)	3371416
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
23	24.5	3.5	2.3	chr6	37170158	37170242	(133635737)	+	(GGC)n	Simple_repeat	1	88	(0)	3374136
32	0.0	0.0	0.0	chr6	37170248	37170277	(133635702)	+	(GCA)n	Simple_repeat	1	30	(0)	3374137
35	20.9	0.0	0.0	chr6	37170434	37170510	(133635469)	+	(CAGCCA)n	Simple_repeat	1	77	(0)	3374138
895	27.6	6.0	11.6	chr6	37244688	37245134	(133560845)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	105	3374321
779	30.7	3.1	10.7	chr6	37245234	37245653	(133560326)	C	MLT1N2	LTR/ERVL-MaLR	(153)	409	23	3374332
18742	10.1	3.5	1.2	chr6	38532951	38537126	(132268853)	+	L1MA3	LINE/L1	3450	7724	(0)	3376530
265	34.4	13.6	1.0	chr6	38799222	38799535	(132006444)	+	L2	LINE/L2	1573	1932	(1487)	3377004
1790	24.6	7.4	5.9	chr6	39716770	39717754	(131088225)	+	L2a	LINE/L2	2433	3426	(0)	3378424
14	15.6	0.0	0.0	chr6	41073192	41073220	(129732759)	+	(GAGCC)n	Simple_repeat	1	29	(0)	3380581
193	34.9	0.0	0.0	chr6	41449899	41449961	(129356018)	C	L2b	LINE/L2	(7)	3419	3357	3381182
684	29.8	5.5	2.0	chr6	41450055	41450301	(129355678)	+	MIR	SINE/MIR	6	261	(1)	3381183
15	12.6	8.9	2.0	chr6	41786632	41786676	(129019303)	+	(CGG)n	Simple_repeat	1	49	(0)	3381816
198	33.8	17.1	0.8	chr6	41816303	41816547	(128989432)	+	L2	LINE/L2	1980	2272	(1147)	3381865
364	33.3	4.8	3.0	chr6	42194059	42194222	(128611757)	C	L3	LINE/CR1	(19)	4080	3914	3382763
667	22.6	8.4	6.0	chr6	42358525	42358792	(128447187)	+	Charlie18a	DNA/hAT-Charlie	24	298	(44)	3383087
365	26.1	2.2	0.0	chr6	42420157	42420244	(128385735)	+	MIR3	SINE/MIR	98	187	(21)	3383209
14	14.9	5.4	0.0	chr6	42783122	42783158	(128022821)	+	(CGCTCC)n	Simple_repeat	1	39	(0)	3384026
13	16.4	8.6	3.2	chr6	42783234	42783291	(128022688)	+	(CCGCGG)n	Simple_repeat	1	63	(0)	3384027
265	29.1	1.9	3.7	chr6	43282267	43282373	(127523606)	+	MIR3	SINE/MIR	95	199	(9)	3385057
546	26.0	0.0	4.5	chr6	43282494	43282626	(127523353)	C	L2b	LINE/L2	(3)	3372	3246	3385058
16	16.5	0.0	0.0	chr6	43455623	43455649	(127350330)	+	(C)n	Simple_repeat	1	27	(0)	3385385
196	18.6	4.4	0.0	chr6	43901487	43901529	(126904450)	+	MIR3	SINE/MIR	40	84	(124)	3386216
1486	25.5	12.4	13.8	chr6	43901672	43902504	(126903475)	+	LTR8B	LTR/ERV1	1	820	(0)	3386217
8330	12.5	4.1	0.9	chr6	43957128	43958503	(126847476)	+	Tigger2	DNA/TcMar-Tigger	4	1425	(1293)	3386317
16	21.7	0.0	2.6	chr6	44074597	44074635	(126731344)	+	(AC)n	Simple_repeat	1	39	(0)	3386518
554	28.8	11.3	1.4	chr6	44104992	44105213	(126700766)	+	MIRb	SINE/MIR	16	262	(6)	3386579
2455	8.2	0.3	0.0	chr6	44105419	44105723	(126700256)	+	AluSp	SINE/Alu	1	306	(7)	3386580
12	16.4	5.9	0.0	chr6	44246276	44246309	(126559670)	+	(CATCC)n	Simple_repeat	1	36	(0)	3386851
566	31.4	3.8	7.7	chr6	46452305	46452604	(124353375)	C	MLT1I	LTR/ERVL-MaLR	(5)	406	119	3390212
282	29.9	4.0	1.0	chr6	46452674	46452771	(124353208)	+	MIR	SINE/MIR	152	252	(10)	3390211
497	28.4	5.8	9.2	chr6	47568759	47569017	(123236962)	C	L2a	LINE/L2	(1104)	2315	2053	3391964
282	23.5	4.2	0.0	chr6	47569018	47569085	(123236894)	C	L2-3_Crp	LINE/L2	(1281)	815	745	3391967
2680	31.3	2.2	4.1	chr6	50376116	50377064	(120428915)	C	L1MB8	LINE/L1	(5926)	941	11	3395598
22697	11.1	1.4	1.8	chr6	51848919	51855371	(118950608)	C	L1PA8A	LINE/L1	(1)	6445	7	3397647
17	13.2	6.0	7.0	chr6	52362168	52362234	(118443745)	+	(GCTCGG)n	Simple_repeat	1	71	(0)	3398425
1900	19.6	7.2	6.8	chr6	52636794	52637702	(118168277)	+	L1ME2z	LINE/L1	5313	6166	(278)	3398859
1811	20.7	3.5	4.6	chr6	54636178	54636587	(116169392)	C	MLT2D	LTR/ERVL	(7)	407	3	3401879
1995	15.0	11.2	1.8	chr6	55992499	55992885	(114813094)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3403612
3579	26.3	4.8	2.5	chr6	56171854	56173152	(114632827)	+	L1MB1	LINE/L1	1338	2667	(4850)	3403849
15	9.4	5.6	2.6	chr6	56843474	56843509	(113962470)	+	G-rich	Low_complexity	1	38	(0)	3404689
806	35.6	12.7	5.0	chr6	56945244	56945729	(113860250)	C	L2b	LINE/L2	(656)	2763	2230	3404887
682	10.5	0.0	7.1	chr6	56945730	56945842	(113860137)	+	U6	snRNA	1	105	(2)	3404890
806	35.6	12.7	5.0	chr6	56945843	56945853	(113860126)	C	L2b	LINE/L2	(1190)	2229	2229	3404887
1167	12.7	0.9	4.5	chr6	56945854	56946075	(113859904)	+	L1MB8	LINE/L1	5959	6172	(6)	3404891
7090	23.1	7.0	3.1	chr6	57081367	57083478	(113722501)	C	L1MB8	LINE/L1	(4655)	2212	11	3405094
12	18.1	0.0	3.0	chr6	57973720	57973752	(112832227)	+	(TTATTT)n	Simple_repeat	1	33	(0)	3406392
12	4.3	8.3	0.0	chr6	71420624	71420647	(99385332)	+	(AGG)n	Simple_repeat	1	26	(0)	3420543
2369	10.7	0.0	0.3	chr6	72785367	72785708	(98020271)	+	AluSq2	SINE/Alu	1	313	(0)	3422329
2034	17.7	1.3	1.0	chr6	72965100	72965492	(97840487)	+	Tigger17a	DNA/TcMar-Tigger	261	654	(0)	3422590
1276	28.2	8.1	9.1	chr6	75268212	75268937	(95537042)	+	MER21C	LTR/ERVL	125	842	(96)	3425964
12461	14.7	4.3	2.4	chr6	75569995	75570480	(95235499)	+	L1PA10	LINE/L1	1576	2037	(4316)	3426409
3685	16.9	6.9	2.2	chr6	79197006	79197774	(91608205)	C	L1MB7	LINE/L1	(41)	6143	5332	3430939
2728	27.9	4.3	6.8	chr6	79440941	79442079	(91363900)	C	MLT1H-int	LTR/ERVL-MaLR	(0)	1409	300	3431232
1604	26.2	7.1	0.9	chr6	82205952	82206386	(88599593)	+	L1MB7	LINE/L1	2	465	(7052)	3434782
2038	11.5	12.3	0.0	chr6	83867684	83867996	(86937983)	+	LTR18A	LTR/ERVL	1	357	(0)	3437088
1783	17.0	4.9	0.9	chr6	85498588	85498919	(85307060)	C	MLT1A0	LTR/ERVL-MaLR	(16)	349	4	3439134
1604	19.3	9.0	6.2	chr6	85499095	85499546	(85306433)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	2	3439135
1877	9.4	3.4	2.3	chr6	85601060	85601324	(85204655)	+	AluSx1	SINE/Alu	1	268	(44)	3439290
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
1771	11.4	7.9	7.4	chr6	87965843	87966028	(82839951)	+	THE1D	LTR/ERVL-MaLR	1	211	(170)	3442512
30	0.0	0.0	0.0	chr6	87966029	87966054	(82839925)	+	(CT)n	Simple_repeat	1	26	(0)	3442513
1771	11.4	7.9	7.4	chr6	87966055	87966246	(82839733)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	3442512
17	19.1	7.2	2.7	chr6	88166294	88166362	(82639617)	+	(TCGCTC)n	Simple_repeat	1	74	(0)	3442790
1670	22.4	2.8	2.5	chr6	88717534	88717932	(82088047)	+	L1MDa	LINE/L1	128	527	(6106)	3443475
2361	9.0	1.0	0.0	chr6	89307815	89308114	(81497865)	C	AluSx1	SINE/Alu	(9)	303	1	3444540
960	26.1	8.0	8.8	chr6	89471378	89471831	(81334148)	C	L2	LINE/L2	(1047)	2372	1923	3444843
1936	15.6	1.0	0.3	chr6	89535948	89536249	(81269730)	+	AluSz	SINE/Alu	1	304	(8)	3444958
459	30.8	7.5	1.3	chr6	89536250	89536296	(81269683)	+	MIR	SINE/MIR	210	254	(8)	3444957
7374	19.9	5.6	5.5	chr6	99385117	99385685	(71420294)	+	L1MD	LINE/L1	2461	3027	(3119)	3457539
1534	16.2	11.0	2.8	chr6	100520564	100520880	(70285099)	+	Tigger3a	DNA/TcMar-Tigger	1	346	(2)	3459091
422	33.8	12.1	4.5	chr6	100520881	100521053	(70284926)	+	L2c	LINE/L2	3181	3381	(6)	3459090
1309	29.4	10.9	4.0	chr6	104066107	104067162	(66738817)	+	L2a	LINE/L2	2295	3426	(0)	3463508
1621	33.0	12.2	4.7	chr6	106312661	106313442	(64492537)	C	L2a	LINE/L2	(1239)	2180	1328	3466706
17	0.0	0.0	0.0	chr6	107602569	107602613	(63203366)	+	(A)n	Simple_repeat	1	45	(0)	3469099
1894	32.0	13.8	6.9	chr6	108067860	108069298	(62736681)	+	L2c	LINE/L2	1818	3384	(3)	3469891
7164	23.3	7.5	5.7	chr6	108612702	108615989	(62189990)	C	L1ME1	LINE/L1	(1954)	4365	1051	3470893
958	26.0	19.5	0.9	chr6	109472652	109473117	(61332862)	+	L2a	LINE/L2	2341	2914	(505)	3472211
2343	22.2	3.2	2.3	chr6	109722722	109723246	(61082733)	C	L1M4b	LINE/L1	(6337)	530	1	3472573
4732	5.7	1.0	0.3	chr6	111289137	111289771	(59516208)	C	Harlequin-int	LTR/ERV1	(6003)	893	262	3475357
2531	10.1	0.5	0.0	chr6	111289767	111290144	(59515835)	C	Harlequin-int	LTR/ERV1	(6516)	380	1	3475356
17	9.7	2.9	2.8	chr6	111872875	111872909	(58933070)	+	(GCG)n	Simple_repeat	1	36	(0)	3476292
1882	15.0	2.0	3.7	chr6	112196035	112196435	(58609544)	C	L1MA5	LINE/L1	(0)	6300	5907	3476752
650	16.8	0.0	0.0	chr6	112196440	112196546	(58609433)	C	U6	snRNA	(0)	107	1	3476753
7424	14.3	3.0	0.7	chr6	115698045	115699269	(55106710)	+	Tigger1	DNA/TcMar-Tigger	1166	2418	(0)	3481615
3803	26.0	7.8	5.6	chr6	118487374	118488985	(52316994)	+	L1M3d	LINE/L1	413	1787	(4516)	3485229
1647	29.5	9.1	7.8	chr6	118644144	118645397	(52160582)	+	L2a	LINE/L2	2019	3305	(121)	3485438
1622	23.2	7.3	2.9	chr6	118786688	118787108	(52018871)	+	LTR40a	LTR/ERVL	79	519	(0)	3485689
1725	16.2	0.0	2.1	chr6	118787345	118787634	(52018345)	+	AluJr4	SINE/Alu	1	284	(28)	3485690
1513	25.6	7.2	1.9	chr6	118935315	118935928	(51870051)	C	L1M4	LINE/L1	(1034)	5112	4464	3485881
2475	10.3	0.8	0.0	chr6	118935954	118936320	(51869659)	C	THE1C	LTR/ERVL-MaLR	(5)	370	1	3485882
1066	20.1	3.1	6.7	chr6	119326976	119327274	(51478705)	+	MLT1E2	LTR/ERVL-MaLR	2	289	(338)	3486466
524	20.9	1.9	0.0	chr6	119327281	119327385	(51478594)	+	U6	snRNA	1	107	(0)	3486467
2172	11.8	0.3	0.3	chr6	125021893	125022181	(45783798)	C	AluSx	SINE/Alu	(23)	289	1	3493732
21	10.8	0.0	0.0	chr6	125138172	125138202	(45667777)	+	(CA)n	Simple_repeat	1	31	(0)	3493904
1869	19.2	8.8	6.3	chr6	125138371	125138910	(45667069)	+	MER34C2	LTR/ERV1	1	555	(0)	3493905
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
481	6.2	0.0	0.0	chr6	125302382	125302445	(45503534)	+	MER72	LTR/ERV1	659	722	(0)	3494129
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
13	13.2	6.7	4.2	chr6	125956943	125956987	(44848992)	+	(GAGGCGC)n	Simple_repeat	1	48	(0)	3495078
1753	25.1	8.1	6.1	chr6	126671495	126671871	(44134108)	+	L1MEg	LINE/L1	358	750	(5667)	3495902
2251	14.4	0.0	0.0	chr6	126671872	126672183	(44133796)	+	AluSz6	SINE/Alu	1	312	(0)	3495903
32	30.2	2.1	2.7	chr6	127118719	127118862	(43687117)	+	(CCG)n	Simple_repeat	1	147	(0)	3496468
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
305	32.2	0.0	1.1	chr6	127587873	127587963	(43218016)	+	MIR	SINE/MIR	13	102	(160)	3497093
506	31.0	8.3	8.6	chr6	127588042	127588415	(43217564)	C	MLT1H	LTR/ERVL-MaLR	(165)	384	12	3497094
8551	19.1	5.5	2.8	chr6	131393336	131395402	(39410577)	C	L1M4	LINE/L1	(5378)	2139	15	3502268
14	17.6	2.5	2.4	chr6	131950864	131950903	(38855076)	+	(GCCGCA)n	Simple_repeat	1	41	(0)	3503156
13	16.8	0.0	5.4	chr6	131950933	131950969	(38855010)	+	(GCCCG)n	Simple_repeat	1	37	(0)	3503157
22110	10.0	1.8	0.9	chr6	132419552	132425836	(38380143)	C	L1PA10	LINE/L1	(3)	6350	2	3503819
444	16.5	8.5	4.6	chr6	132876668	132876820	(37929159)	+	MER61E	LTR/ERV1	1	157	(437)	3504483
288	20.3	0.0	0.0	chr6	132876851	132876909	(37929070)	+	MER61E	LTR/ERV1	144	202	(818)	3504483
12	20.9	4.4	0.0	chr6	132910082	132910107	(37895872)	+	(TTTCTAG)n	Simple_repeat	1	26	(0)	3504528
30	2.9	0.0	5.1	chr6	133093848	133093886	(37712093)	+	(AT)n	Simple_repeat	1	39	(0)	3504791
273	26.0	7.8	0.0	chr6	133093936	133094047	(37711932)	+	MIRb	SINE/MIR	137	261	(7)	3504790
309	31.1	1.6	7.8	chr6	133094105	133094233	(37711746)	C	MIRb	SINE/MIR	(119)	149	29	3504792
12	24.8	0.0	5.7	chr6	133241192	133241244	(37564735)	+	(CCCCCGG)n	Simple_repeat	1	53	(0)	3504977
21	16.1	0.0	0.0	chr6	133248862	133248896	(37557083)	+	(T)n	Simple_repeat	1	35	(0)	3504983
490	33.1	4.2	8.4	chr6	133278147	133278515	(37527464)	+	L2c	LINE/L2	3020	3372	(15)	3505031
15	24.8	2.1	0.0	chr6	134138471	134138518	(36667461)	+	(TTCTTT)n	Simple_repeat	1	49	(0)	3506251
27	0.0	0.0	0.0	chr6	134138521	134138546	(36667433)	+	(T)n	Simple_repeat	1	26	(0)	3506252
287	28.4	12.1	4.1	chr6	134656453	134656493	(36149486)	+	MIR3	SINE/MIR	152	188	(20)	3507256
14	12.5	0.0	0.0	chr6	134656598	134656623	(36149356)	+	(TTG)n	Simple_repeat	1	26	(0)	3507258
815	18.7	0.0	7.8	chr6	134656625	134656753	(36149226)	C	AluJr	SINE/Alu	(23)	289	171	3507259
23611	8.8	1.7	0.8	chr6	134789082	134794575	(36011404)	+	L1PA10	LINE/L1	5	5552	(779)	3507473
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
38	15.6	4.1	2.9	chr6	138987868	138987965	(31818014)	+	(CGGCTG)n	Simple_repeat	1	102	(0)	3513898
30	34.8	0.0	0.0	chr6	139373348	139373463	(31432516)	+	(GCC)n	Simple_repeat	1	116	(0)	3514554
1100	29.9	15.9	1.9	chr6	142034568	142035153	(28770826)	C	L2a	LINE/L2	(1004)	2415	1732	3517983
320	22.2	0.0	0.0	chr6	142041339	142041401	(28764578)	C	MIR	SINE/MIR	(28)	234	172	3517992
849	21.4	1.0	1.0	chr6	142802247	142802440	(28003539)	C	MLT1J1	LTR/ERVL-MaLR	(249)	195	2	3519000
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
11585	14.8	5.6	3.0	chr6	143919272	143919951	(26886028)	C	L1M4c	LINE/L1	(5699)	685	8	3520584
3907	24.1	4.4	1.7	chr6	147148503	147149422	(23656557)	C	L1M4	LINE/L1	(6537)	980	35	3525011
18	23.2	0.0	3.7	chr6	147509159	147509212	(23296767)	+	(GCC)n	Simple_repeat	1	54	(0)	3525503
599	25.9	9.1	6.6	chr6	151179467	151179870	(19626109)	C	MLT1K	LTR/ERVL-MaLR	(76)	519	29	3531497
1024	26.1	7.7	2.9	chr6	154758212	154758639	(16047340)	C	L1MEf	LINE/L1	(5543)	1097	650	3537004
12	10.4	6.1	2.9	chr6	154951868	154951900	(15854079)	+	(CCTTGT)n	Simple_repeat	1	35	(0)	3537330
4425	21.6	9.9	6.4	chr6	155643446	155643841	(15162138)	C	L1M4	LINE/L1	(7030)	487	17	3538392
10435	14.2	7.8	1.5	chr6	158577083	158577808	(12228171)	+	L1M4c	LINE/L1	1081	1861	(4785)	3542771
6317	14.1	3.1	1.6	chr6	158612303	158613921	(12192058)	C	LTR19-int	LTR/ERV1	(524)	6894	3783	3542832
11240	18.0	4.9	3.0	chr6	158970850	158971428	(11834551)	C	L1M4	LINE/L1	(6901)	616	17	3543459
488	31.6	7.5	5.6	chr6	160575242	160576129	(10229850)	C	L1MEc	LINE/L1	(5316)	1099	109	3545568
1164	31.9	7.4	2.8	chr6	164424522	164425060	(6380919)	+	L1M4	LINE/L1	17	582	(6935)	3550746
279	31.7	2.5	11.5	chr6	165469669	165469982	(5335997)	+	L4_B_Mam	LINE/RTE-X	4090	4374	(567)	3551993
1827	24.2	8.8	9.6	chr6	165651036	165651413	(5154566)	C	L1ME4b	LINE/L1	(536)	356	1	3552215
74	20.8	4.8	4.9	chr6	167826767	167827057	(2978922)	+	(GGC)n	Simple_repeat	1	305	(0)	3554843
13	10.7	3.1	3.0	chr6	167827074	167827105	(2978874)	+	(CGGCCC)n	Simple_repeat	1	33	(0)	3554844
19	18.8	4.0	5.2	chr6	167827252	167827325	(2978654)	+	(GCGCC)n	Simple_repeat	1	77	(0)	3554845
13	26.8	2.2	0.0	chr6	170584448	170584492	(221487)	+	(CCCG)n	Simple_repeat	1	46	(0)	3557615
13	23.8	3.9	4.4	chr7	332515	332580	(159013393)	+	G-rich	Low_complexity	1	65	(0)	3558212
14	24.0	0.0	0.0	chr7	455720	455758	(158890215)	+	(GCCC)n	Simple_repeat	1	39	(0)	3558370
5275	23.9	7.5	3.9	chr7	3738984	3740893	(155605080)	C	L1MA9	LINE/L1	(5556)	1961	5	3563738
667	26.1	8.8	11.7	chr7	6202023	6202457	(153143516)	+	MLT1H	LTR/ERVL-MaLR	63	478	(71)	3568792
2344	8.0	1.6	0.3	chr7	6202458	6202758	(153143215)	C	AluSp	SINE/Alu	(8)	305	1	3568793
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
932	21.6	8.3	4.2	chr7	16819206	16819539	(142526434)	C	L1MB8	LINE/L1	(16)	6162	5814	3583076
3008	27.1	8.7	2.7	chr7	21480672	21481562	(137864411)	C	L1MB8	LINE/L1	(5914)	953	4	3589342
3245	22.8	5.6	5.0	chr7	21496728	21497572	(137848401)	C	L1M4	LINE/L1	(6663)	854	4	3589365
5505	12.6	3.4	0.3	chr7	21822985	21823193	(137522780)	C	L1MA4	LINE/L1	(1004)	5296	5081	3589776
18611	5.2	1.2	0.1	chr7	27447206	27449676	(131896297)	C	L1P2	LINE/L1	(3656)	2490	8	3598516
6289	14.2	3.0	2.3	chr7	29056024	29056938	(130289035)	C	L1MC1	LINE/L1	(6)	6502	5571	3600966
368	34.8	8.8	1.0	chr7	29370900	29371108	(129974865)	+	MIRb	SINE/MIR	28	254	(14)	3601498
1191	24.0	8.8	1.3	chr7	29654104	29654422	(129691551)	+	L1M4	LINE/L1	38	356	(7161)	3601919
1976	25.1	4.4	2.4	chr7	30380164	30380657	(128965316)	C	L1M4a2	LINE/L1	(2147)	509	6	3603062
1034	24.3	1.4	0.5	chr7	32759984	32760231	(126585742)	C	L1M4	LINE/L1	(7257)	260	38	3606729
1099	32.9	3.7	4.0	chr7	32937731	32938354	(126407619)	+	LTR49-int	LTR/ERV1	535	1156	(6419)	3607033
1294	12.8	0.0	1.0	chr7	33026199	33026376	(126319597)	+	AluSx1	SINE/Alu	134	310	(2)	3607220
2183	12.8	0.7	0.0	chr7	33167401	33167698	(126178275)	C	AluSg	SINE/Alu	(10)	300	1	3607472
8633	10.4	2.9	2.1	chr7	33167699	33168812	(126177161)	C	MER57A-int	LTR/ERV1	(2645)	3542	2413	3607471
946	26.3	6.6	0.8	chr7	33707835	33708191	(125637782)	C	L1ME4b	LINE/L1	(501)	391	13	3608245
974	23.1	2.0	0.6	chr7	35184233	35184453	(124161520)	C	L1M4	LINE/L1	(7283)	234	38	3610306
7954	19.3	2.6	1.9	chr7	38135977	38137157	(121208816)	+	L1ME1	LINE/L1	2400	3574	(2963)	3614693
231	28.8	7.1	3.3	chr7	44455118	44455239	(114890734)	+	L2	LINE/L2	2312	2438	(981)	3624204
545	26.0	3.0	5.3	chr7	45245794	45246000	(114099973)	+	L1M4a2	LINE/L1	45	246	(2410)	3625704
46	38.1	0.5	0.5	chr7	45246012	45246203	(114099770)	+	(CACA)n	Simple_repeat	1	193	(0)	3625705
493	31.7	7.1	3.0	chr7	47969679	47969948	(111376025)	+	L1M8	LINE/L1	468	749	(1606)	3629302
472	29.9	10.8	0.5	chr7	50449614	50449821	(108896152)	+	MIR	SINE/MIR	17	248	(14)	3632382
1398	27.0	5.0	2.3	chr7	51381160	51381673	(107964300)	+	L1M2	LINE/L1	2095	2627	(4222)	3633596
773	22.4	0.0	4.0	chr7	70343991	70344167	(89001806)	+	MER96	DNA/hAT-Tip100	1	170	(5)	3658179
2926	23.9	7.0	4.6	chr7	70714182	70715199	(88630774)	C	L1MC5a	LINE/L1	(9)	2768	1725	3658728
364	34.4	12.3	4.5	chr7	72270795	72271278	(87074695)	C	L2	LINE/L2	(574)	2845	2319	3661973
35	5.0	1.4	6.8	chr7	73667848	73667919	(85678054)	+	(CGGAG)n	Simple_repeat	1	73	(0)	3665208
13	14.1	10.3	3.1	chr7	73667942	73667999	(85677974)	+	G-rich	Low_complexity	1	64	(0)	3665209
20	23.2	1.6	1.6	chr7	73719518	73719579	(85626394)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3665292
2087	21.2	9.4	3.9	chr7	73941921	73942518	(85403455)	C	L1M4	LINE/L1	(6849)	668	34	3665838
12	12.0	3.7	0.0	chr7	75092733	75092759	(84253214)	+	(CGCGG)n	Simple_repeat	1	28	(0)	3668774
20	29.7	2.7	0.0	chr7	75092760	75092806	(84253167)	+	(CCG)n	Simple_repeat	2	77	(0)	3668775
7666	19.4	10.3	2.7	chr7	81919514	81921131	(77424842)	C	MER52A	LTR/ERV1	(0)	1755	1	3680182
1079	31.3	14.7	3.9	chr7	87035368	87036189	(72309784)	C	L3	LINE/CR1	(212)	3887	2962	3686698
420	31.4	16.7	4.5	chr7	90791624	90791900	(68554073)	+	L2c	LINE/L2	1907	2245	(1174)	3691625
13290	10.9	4.0	2.3	chr7	92189899	92192047	(67153926)	C	L1PA16	LINE/L1	(1764)	5085	2889	3693496
5500	20.5	8.0	2.2	chr7	94576931	94578207	(64767766)	C	L1M4	LINE/L1	(6135)	1382	26	3696847
11295	16.9	1.6	0.9	chr7	97699220	97701514	(61644459)	+	L1PA12	LINE/L1	8	3141	(4400)	3701178
7674	1.8	0.4	0.0	chr7	97701515	97702898	(61643075)	+	L1PA3	LINE/L1	4758	6147	(8)	3701179
2182	14.9	1.3	4.3	chr7	98726147	98726314	(60619659)	+	THE1D	LTR/ERVL-MaLR	1	164	(217)	3703253
2114	12.5	0.0	1.0	chr7	98726315	98726625	(60619348)	C	AluSx1	SINE/Alu	(4)	308	1	3703254
1656	15.7	3.8	2.1	chr7	98743055	98743341	(60602632)	C	AluJo	SINE/Alu	(20)	292	1	3703296
17	10.8	4.5	4.3	chr7	99143814	99143857	(60202116)	+	(CGCCC)n	Simple_repeat	1	46	(0)	3704035
49	19.1	3.5	5.6	chr7	99144016	99144187	(60201786)	+	(GCCGCC)n	Simple_repeat	1	178	(0)	3704036
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
1253	13.9	2.5	0.5	chr7	99500501	99500694	(59845279)	C	AluSx3	SINE/Alu	(31)	280	83	3704872
2411	16.0	4.3	2.2	chr7	99555028	99555480	(59790493)	+	MLT1C	LTR/ERVL-MaLR	5	467	(0)	3705009
1080	29.4	9.4	5.5	chr7	99555481	99555626	(59790347)	C	ERVL-B4-int	LTR/ERVL	(2178)	3048	2885	3705007
2187	12.1	1.0	0.0	chr7	99555627	99555933	(59790040)	+	AluSx1	SINE/Alu	1	310	(2)	3705010
12	25.9	1.9	3.6	chr7	100272046	100272099	(59073874)	+	G-rich	Low_complexity	1	55	(0)	3706205
19	12.2	7.0	3.3	chr7	100483742	100483812	(58862161)	+	(GCCCCCGC)n	Simple_repeat	1	73	(0)	3706692
1924	10.2	12.9	4.3	chr7	100592272	100592576	(58753397)	C	THE1D	LTR/ERVL-MaLR	(32)	349	1	3706909
45	2.3	0.0	0.0	chr7	100673816	100673860	(58672113)	+	(CGC)n	Simple_repeat	1	45	(0)	3707120
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
2484	6.3	0.0	1.6	chr7	101192792	101193107	(58152866)	+	AluY	SINE/Alu	1	311	(0)	3708212
11093	18.7	5.5	7.3	chr7	103047996	103050421	(56295552)	C	MER57-int	LTR/ERV1	(2404)	5412	1549	3712120
14	27.2	3.5	0.0	chr7	103074995	103075051	(56270922)	+	(CGCCC)n	Simple_repeat	1	59	(0)	3712168
14	20.2	4.3	2.0	chr7	105388347	105388393	(53957580)	+	(CGCC)n	Simple_repeat	1	49	(0)	3715694
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
1251	26.9	9.1	4.2	chr7	106331480	106331906	(53014067)	C	LTR16A1	LTR/ERVL	(1)	455	6	3717443
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
2111	32.9	13.3	2.9	chr7	107666872	107668581	(51677392)	C	L2a	LINE/L2	(687)	2732	808	3719418
326	15.0	30.6	0.0	chr7	107668723	107668822	(51677151)	C	MLT1A	LTR/ERVL-MaLR	(48)	326	183	3719421
938	18.8	2.6	1.1	chr7	111147736	111147923	(48198050)	+	L1MB7	LINE/L1	17	207	(7310)	3723942
2821	19.7	0.8	1.5	chr7	111147924	111148540	(48197433)	+	L1MB7	LINE/L1	6060	6672	(10)	3723942
340	31.2	2.0	0.0	chr7	112572697	112572792	(46773181)	+	L4_A_Mam	LINE/RTE-X	1331	1428	(3562)	3726024
8795	20.6	3.2	2.8	chr7	114209381	114211619	(45134354)	C	L1PA10	LINE/L1	(4251)	3912	20	3728112
429	34.2	7.8	2.1	chr7	116167207	116167448	(43178525)	+	LTR33	LTR/ERVL	115	371	(144)	3730681
1851	20.0	6.6	3.0	chr7	116167502	116167939	(43178034)	+	MLT1C	LTR/ERVL-MaLR	13	467	(0)	3730684
15	20.1	2.5	0.0	chr7	116340495	116340534	(43005439)	+	(CTTTTT)n	Simple_repeat	1	41	(0)	3730913
1967	18.7	7.1	0.5	chr7	121118616	121119008	(38226965)	C	MSTA	LTR/ERVL-MaLR	(0)	428	8	3737257
273	34.2	3.5	2.6	chr7	121133021	121133134	(38212839)	C	MIRc	SINE/MIR	(34)	234	120	3737276
17	5.3	9.3	4.3	chr7	122886177	122886219	(36459754)	+	(GCC)n	Simple_repeat	1	47	(0)	3739683
541	34.0	15.3	3.5	chr7	127845473	127846225	(31499748)	+	L4_A_Mam	LINE/RTE-X	3467	4324	(666)	3746306
964	25.3	13.1	1.7	chr7	128286400	128286757	(31059216)	+	LTR16	LTR/ERVL	1	405	(33)	3746958
20	14.9	0.0	0.0	chr7	129189155	129189220	(30156753)	+	(GCT)n	Simple_repeat	1	66	(0)	3748680
17	29.8	1.5	0.0	chr7	129189247	129189311	(30156662)	+	(GAGCGG)n	Simple_repeat	1	66	(0)	3748681
732	20.6	1.1	3.2	chr7	130824612	130824797	(28521176)	C	L1M4b	LINE/L1	(3465)	3541	3360	3751694
400	20.8	10.2	0.7	chr7	130824800	130824949	(28521024)	C	L1M4b	LINE/L1	(4684)	2183	2018	3751694
12	7.2	2.9	8.3	chr7	131106094	131106128	(28239845)	+	(CCGCC)n	Simple_repeat	1	36	(0)	3752133
13338	17.3	4.2	5.8	chr7	131253010	131254899	(28091074)	+	L1M4b	LINE/L1	11	1912	(4955)	3752466
13338	17.3	4.2	5.8	chr7	131255238	131255586	(28090387)	+	L1M4b	LINE/L1	1913	2206	(4661)	3752466
525	32.8	1.9	3.8	chr7	133071334	133071599	(26274374)	C	L2	LINE/L2	(433)	2986	2726	3755333
1857	19.6	4.4	0.7	chr7	133071622	133072038	(26273935)	+	L1MB8	LINE/L1	5663	6095	(83)	3755334
12633	16.9	4.1	3.2	chr7	133349135	133354979	(25990994)	C	L1MB3	LINE/L1	(0)	6419	20	3755819
203	38.4	9.9	0.7	chr7	133460996	133461142	(25884831)	C	L2c	LINE/L2	(180)	3207	3046	3755972
211	23.1	0.0	3.7	chr7	133461351	133461404	(25884569)	+	L2b	LINE/L2	3320	3371	(4)	3755973
260	33.2	14.7	1.5	chr7	133662224	133662483	(25683490)	C	L2	LINE/L2	(1147)	2272	1973	3756280
16	0.0	0.0	0.0	chr7	133662617	133662636	(25683337)	+	(AAC)n	Simple_repeat	1	20	(0)	3756281
3892	20.4	7.1	4.5	chr7	134085264	134086229	(25259744)	+	L1M4	LINE/L1	15	1008	(6509)	3756928
2262	27.0	2.5	1.3	chr7	137702400	137703030	(21642943)	+	L1M4	LINE/L1	11	649	(6868)	3762289
2088	20.3	7.8	3.7	chr7	138499311	138499766	(20846207)	C	MER70B	LTR/ERVL	(102)	476	1	3763747
189	25.9	21.4	0.0	chr7	139895101	139895247	(19450726)	C	L2c	LINE/L2	(224)	3163	2977	3766378
16	25.2	0.0	3.6	chr7	149147655	149147709	(10198264)	+	(CGG)n	Simple_repeat	1	55	(0)	3780152
3896	24.1	4.6	2.4	chr7	149509823	149510621	(9835352)	+	L1MA4	LINE/L1	2203	3025	(4540)	3780796
904	25.9	5.8	3.1	chr7	150917717	150918066	(8427907)	+	L1M7	LINE/L1	492	851	(5392)	3782645
466	24.5	8.4	0.1	chr7	150918080	150918408	(8427565)	+	L1M7	LINE/L1	908	1295	(1060)	3782645
985	30.2	16.2	2.0	chr7	151463798	151464438	(7881535)	C	L2c	LINE/L2	(729)	2690	1942	3783488
2162	24.8	6.2	4.2	chr7	151579699	151580061	(7765912)	+	L1MEg	LINE/L1	1213	1578	(4598)	3783695
15	23.4	3.9	5.0	chr7	151631866	151631942	(7714031)	+	(CCCCGGA)n	Simple_repeat	1	80	(0)	3783798
13	18.8	0.0	5.0	chr7	151632021	151632060	(7713913)	+	(GGCCG)n	Simple_repeat	1	40	(0)	3783799
180	16.7	0.0	0.0	chr7	151782861	151782890	(7563083)	C	L3b	LINE/CR1	(24)	5208	5179	3784038
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
2083	13.6	0.3	0.0	chr7	152475264	152475572	(6870401)	+	AluSx1	SINE/Alu	1	310	(2)	3785209
14	32.0	0.0	0.0	chr7	156892384	156892437	(2453536)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3791498
2484	10.0	0.0	0.0	chr7	156986595	156986904	(2359069)	+	AluSc8	SINE/Alu	1	310	(1)	3791672
6021	22.0	4.6	2.8	chr7	158937921	158938475	(407498)	+	L1M3f	LINE/L1	2442	2992	(4573)	3793928
5552	15.9	6.6	1.4	chr8	710490	711499	(144427137)	C	L1MC1	LINE/L1	(276)	6057	5003	3795102
2972	24.3	7.7	5.3	chr8	971298	972594	(144166042)	+	L1MCb	LINE/L1	1	1406	(5345)	3795358
19	30.1	1.1	3.3	chr8	1973490	1973579	(143165057)	+	G-rich	Low_complexity	1	91	(0)	3796280
3093	15.7	7.3	1.8	chr8	10255835	10256432	(134882204)	C	L1MC1	LINE/L1	(6)	6327	5695	3807778
181	34.3	1.4	0.0	chr8	10615085	10615154	(134523482)	+	L2c	LINE/L2	3283	3353	(34)	3808344
43	2.3	0.0	0.0	chr8	11808705	11808748	(133329888)	+	(CCCACT)n	Simple_repeat	1	44	(0)	3810191
27464	2.6	0.1	0.0	chr8	15555982	15562028	(129576608)	C	L1PA2	LINE/L1	(0)	6155	126	3815579
525	25.0	1.3	14.3	chr8	15718953	15719134	(129419502)	+	L2a	LINE/L2	2630	2787	(632)	3815783
666	31.2	14.4	4.9	chr8	15719195	15719495	(129419141)	+	L2a	LINE/L2	2969	3286	(140)	3815783
22	34.8	0.0	1.2	chr8	16870843	16870927	(128267709)	+	(TA)n	Simple_repeat	1	85	(0)	3817388
12	26.1	0.0	0.0	chr8	16870898	16870934	(128267702)	+	(TATG)n	Simple_repeat	1	37	(0)	3817389
489	31.2	6.9	2.8	chr8	16959492	16959672	(128178964)	+	MIRb	SINE/MIR	69	257	(11)	3817503
1014	15.1	0.0	0.7	chr8	17496180	17496331	(127642305)	+	AluJb	SINE/Alu	142	292	(20)	3818282
919	34.7	9.2	3.8	chr8	17845992	17846593	(127292043)	C	L3	LINE/CR1	(5)	4094	3457	3818809
928	22.6	4.9	0.0	chr8	17964074	17964268	(127174368)	C	MER3	DNA/hAT-Charlie	(4)	205	1	3819000
280	36.8	7.0	6.3	chr8	17964269	17964398	(127174238)	+	L3	LINE/CR1	3677	3824	(275)	3818999
229	28.9	1.9	9.6	chr8	17964396	17964510	(127174126)	+	MIR	SINE/MIR	134	239	(23)	3819001
31	25.6	0.0	8.8	chr8	19013798	19013956	(126124680)	+	G-rich	Low_complexity	1	159	(0)	3820500
15	10.7	3.3	0.0	chr8	19313633	19313662	(125824974)	+	(GGGCG)n	Simple_repeat	1	31	(0)	3821016
21	14.6	0.0	0.0	chr8	19817439	19817476	(125321160)	+	(GCG)n	Simple_repeat	1	38	(0)	3821835
560	28.9	7.2	0.6	chr8	22123212	22123388	(123015248)	+	MIRb	SINE/MIR	2	192	(76)	3825615
14	22.0	2.0	3.9	chr8	22367197	22367247	(122771389)	+	G-rich	Low_complexity	1	52	(0)	3826083
9748	17.9	6.2	2.2	chr8	23280201	23282522	(121856114)	C	L1MDa	LINE/L1	(2741)	3796	1404	3827664
2838	8.3	0.3	0.3	chr8	23282523	23282884	(121855752)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3827665
20	25.4	4.9	1.2	chr8	23457448	23457528	(121681108)	+	(GCCC)n	Simple_repeat	1	85	(0)	3827940
454	29.4	9.1	0.9	chr8	24907848	24908060	(120230576)	+	MIR	SINE/MIR	31	262	(0)	3830160
303	25.5	15.0	0.0	chr8	24908156	24908257	(120230379)	+	MIRc	SINE/MIR	38	157	(111)	3830161
825	19.6	10.8	2.8	chr8	25497858	25498146	(119640490)	+	L1MC5a	LINE/L1	2144	2458	(319)	3831189
296	29.0	2.7	6.1	chr8	25997636	25997749	(119140887)	+	MIR3	SINE/MIR	16	125	(83)	3831925
4317	16.5	8.4	6.1	chr8	26149719	26150658	(118987978)	C	L1MCa	LINE/L1	(5544)	964	1	3832188
256	23.9	1.4	3.4	chr8	28308136	28308229	(116830407)	+	L2a	LINE/L2	3302	3425	(1)	3835893
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
1673	29.3	5.5	0.8	chr8	30315735	30316250	(114822386)	C	MLT1H1	LTR/ERVL-MaLR	(7)	548	7	3839521
13	20.3	0.0	4.7	chr8	30658004	30658046	(114480590)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	3840123
11	17.2	7.7	0.0	chr8	30727772	30727810	(114410826)	+	(CGCGCGC)n	Simple_repeat	1	42	(0)	3840308
13	18.5	2.6	2.5	chr8	33484703	33484741	(111653895)	+	G-rich	Low_complexity	1	40	(0)	3844585
1710	27.9	11.7	5.0	chr8	37344265	37345927	(107792709)	+	L1ME1	LINE/L1	62	1918	(4497)	3850171
212	30.3	8.3	4.3	chr8	37484867	37485028	(107653608)	+	L2a	LINE/L2	3235	3403	(23)	3850388
449	29.7	9.1	7.5	chr8	37625432	37625958	(107512678)	C	MLT1M	LTR/ERVL-MaLR	(3)	539	113	3850658
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
27	22.6	4.8	2.8	chr8	38382201	38382303	(106756333)	+	(GCC)n	Simple_repeat	1	108	(0)	3852196
14	16.6	8.5	0.0	chr8	38468108	38468154	(106670482)	+	(GCTCGGC)n	Simple_repeat	1	51	(0)	3852336
1783	15.5	0.0	1.4	chr8	38497263	38497559	(106641077)	+	AluJb	SINE/Alu	1	293	(19)	3852399
2383	6.4	0.0	0.3	chr8	38497564	38497874	(106640762)	+	AluY	SINE/Alu	2	311	(0)	3852400
16264	12.4	2.0	1.2	chr8	39125588	39128859	(106009777)	C	L1PA11	LINE/L1	(905)	5426	1991	3853542
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
279	18.0	3.9	0.0	chr8	43124467	43124516	(102014120)	C	5S	rRNA	(59)	62	11	3860157
3971	12.4	2.5	4.8	chr8	43124520	43125207	(102013429)	C	LTR76	LTR/ERV1	(3)	672	1	3860158
7169	23.2	8.2	4.6	chr8	47815159	47815491	(97323145)	+	L1MEf	LINE/L1	4705	5054	(1092)	3862438
1255	25.3	10.5	5.0	chr8	47815513	47815927	(97322709)	+	L1MC4	LINE/L1	6949	7380	(662)	3862446
4836	20.4	4.8	0.2	chr8	48484487	48485569	(96653067)	C	L1MB7	LINE/L1	(5201)	2316	1182	3863366
23057	7.7	1.8	0.6	chr8	48485588	48491678	(96646958)	+	L1PA6	LINE/L1	5	6153	(1)	3863371
13536	17.6	5.8	4.2	chr8	51863978	51867476	(93271160)	+	L1MA6	LINE/L1	2187	5778	(522)	3867348
265	13.9	0.0	0.0	chr8	65099489	65099531	(80039105)	C	MER110A	LTR/ERV1	(4)	464	422	3885306
2352	25.5	8.0	3.4	chr8	68795668	68796353	(76342283)	C	L1M4	LINE/L1	(6785)	732	12	3891146
1139	22.1	6.4	4.1	chr8	70317943	70318310	(74820326)	+	MER57A-int	LTR/ERV1	723	1099	(5088)	3893608
1359	20.5	5.4	2.6	chr8	71857384	71858015	(73280621)	C	L1MB7	LINE/L1	(7212)	305	2	3895767
1082	24.8	11.4	1.9	chr8	73016722	73017095	(72121541)	C	L1MEg2	LINE/L1	(6037)	415	2	3897271
1719	21.7	7.4	1.4	chr8	73196579	73197008	(71941628)	+	L1ME1	LINE/L1	5721	6178	(1)	3897612
2240	13.1	0.3	1.0	chr8	73875768	73876073	(71262563)	+	AluSx1	SINE/Alu	1	304	(8)	3898708
573	25.8	3.5	7.9	chr8	73876074	73876246	(71262390)	+	L2a	LINE/L2	3261	3425	(1)	3898707
1609	24.1	7.1	3.2	chr8	81016648	81017174	(64121462)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	3908716
4850	14.7	2.1	0.2	chr8	86289337	86289993	(58848643)	+	L1PB4	LINE/L1	5491	6155	(1)	3915817
369	27.6	14.8	3.7	chr8	86290091	86290252	(58848384)	+	L2c	LINE/L2	2972	3154	(233)	3915819
550	24.6	3.8	0.0	chr8	91213277	91213402	(53925234)	C	MER94	DNA/hAT-Blackjack	(2)	132	2	3922249
289	28.4	8.3	0.0	chr8	93448415	93448502	(51690134)	C	L2b	LINE/L2	(0)	3375	3280	3925228
1041	12.1	27.8	0.0	chr8	97648983	97649205	(47489431)	+	Tigger3a	DNA/TcMar-Tigger	40	348	(0)	3932082
467	35.5	4.2	2.0	chr8	97649238	97649539	(47489097)	+	L2c	LINE/L2	2654	2962	(457)	3932083
950	9.9	0.0	3.0	chr8	98006800	98006930	(47131706)	+	AluSx1	SINE/Alu	137	263	(49)	3932908
1217	29.5	9.5	2.7	chr8	98552177	98552834	(46585802)	+	L2a	LINE/L2	2677	3426	(0)	3933826
1054	23.3	13.8	3.6	chr8	102906177	102906533	(42232103)	C	MLT1J	LTR/ERVL-MaLR	(50)	462	64	3941343
391	22.2	18.1	9.2	chr8	106421325	106421508	(38717128)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	346	3946512
258	31.8	12.7	8.6	chr8	106421484	106421693	(38716943)	C	MLT1H	LTR/ERVL-MaLR	(117)	432	213	3946512
248	29.2	2.7	0.0	chr8	119821040	119821111	(25317525)	+	L3	LINE/CR1	932	1005	(3094)	3965432
10005	22.1	10.3	1.4	chr8	121066405	121069260	(24069376)	+	L1M4b	LINE/L1	1	3139	(3728)	3967640
2445	10.1	0.0	0.7	chr8	123140078	123140373	(21998263)	+	AluSx	SINE/Alu	1	294	(18)	3971247
4538	20.7	5.7	2.9	chr8	123140374	123140625	(21998011)	C	L1MB8	LINE/L1	(7269)	248	3	3971244
447	16.4	8.7	4.9	chr8	123664124	123664245	(21474391)	C	MER53	DNA/hAT	(65)	128	2	3972336
11	10.0	5.6	5.3	chr8	123664407	123664442	(21474194)	+	(TGCCATT)n	Simple_repeat	1	38	(0)	3972337
383	32.2	9.7	2.3	chr8	124953810	124954028	(20184608)	C	MamRTE1	LINE/RTE-BovB	(791)	3021	2785	3974670
14	18.4	2.7	0.0	chr8	129946491	129946527	(15192109)	+	(GAGGACA)n	Simple_repeat	1	38	(0)	3984004
28	10.8	0.0	0.0	chr8	130052712	130052751	(15085885)	+	(T)n	Simple_repeat	1	40	(0)	3984280
1106	29.2	13.1	4.2	chr8	139570559	139571219	(5567417)	+	L1M4	LINE/L1	14	741	(6776)	4000545
527	22.7	6.6	2.3	chr8	139571278	139571408	(5567228)	+	L1MB5	LINE/L1	6031	6167	(7)	4000546
406	31.7	5.3	0.7	chr8	139706153	139706317	(5432319)	C	MIR3	SINE/MIR	(19)	189	21	4000773
265	35.4	3.8	2.3	chr8	140075147	140075276	(5063360)	+	MIRb	SINE/MIR	92	223	(45)	4001311
474	29.9	9.4	1.9	chr8	140340494	140340724	(4797912)	C	MIRb	SINE/MIR	(7)	255	9	4001775
320	27.3	6.4	0.0	chr8	140340976	140341077	(4797559)	C	MIRb	SINE/MIR	(57)	211	98	4001776
1670	28.4	11.9	4.2	chr8	140584080	140584918	(4553718)	+	L1ME2	LINE/L1	5259	6164	(0)	4002207
226	23.1	1.9	0.0	chr8	141233929	141233980	(3904656)	+	MIR	SINE/MIR	34	86	(176)	4003354
630	24.1	14.1	1.7	chr8	142631629	142631864	(2506772)	C	LTR16A1	LTR/ERVL	(0)	456	187	4005121
16	26.7	0.0	3.5	chr8	143431147	143431203	(1707433)	+	(GCG)n	Simple_repeat	1	57	(0)	4006206
14	7.8	0.0	6.5	chr8	143829032	143829062	(1309574)	+	(CGCCC)n	Simple_repeat	1	31	(0)	4006715
253	31.7	12.3	1.2	chr8	143841639	143841804	(1296832)	+	L2	LINE/L2	1281	1467	(1952)	4006734
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
19	6.7	0.0	3.0	chr8	144104524	144104556	(1034080)	+	(TCGC)n	Simple_repeat	1	33	(0)	4007111
816	24.1	14.3	0.3	chr8	144302833	144303127	(835509)	+	L1M5	LINE/L1	5314	5656	(523)	4007433
677	14.4	7.5	0.0	chr8	144307690	144307800	(830836)	+	AluSz6	SINE/Alu	176	295	(17)	4007445
614	18.3	1.6	0.0	chr8	144307804	144307923	(830713)	C	L1M4	LINE/L1	(7322)	195	74	4007439
4623	9.6	1.3	0.0	chr8	144691402	144692003	(446633)	C	LTR71B	LTR/ERV1	(0)	610	1	4007929
264	25.4	0.0	0.0	chr9	2952636	2952694	(135442023)	C	MER4-int	LTR/ERV1	(5442)	1156	1098	4012903
484	28.9	9.7	1.6	chr9	2952913	2953102	(135441615)	+	MIR	SINE/MIR	15	221	(47)	4012904
3326	11.0	8.7	3.8	chr9	5718167	5718636	(132676081)	C	LTR24C	LTR/ERV1	(127)	508	1	4016927
1314	26.0	7.2	13.6	chr9	8538534	8540092	(129854625)	+	L1MC4	LINE/L1	6539	7896	(146)	4021203
1166	25.0	11.5	0.7	chr9	13104410	13104812	(125289905)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	10	4027159
6826	20.2	5.5	0.2	chr9	21527667	21528918	(116865799)	C	L1PA13	LINE/L1	(5460)	1325	4	4039328
12244	13.2	3.6	4.1	chr9	21528920	21531016	(116863701)	C	Tigger1	DNA/TcMar-Tigger	(331)	2087	1	4039331
2348	11.7	0.0	0.0	chr9	34120872	34121179	(104273538)	+	AluSx	SINE/Alu	1	308	(4)	4056774
2142	21.5	7.0	3.1	chr9	34121180	34121538	(104273179)	+	MER90	LTR/ERV1	199	574	(1)	4056772
2431	9.4	0.0	0.0	chr9	34121663	34121971	(104272746)	+	AluSc5	SINE/Alu	1	309	(0)	4056775
244	21.4	0.0	6.7	chr9	34122107	34122181	(104272536)	C	Charlie24	DNA/hAT-Charlie	(0)	2450	2381	4056776
1674	26.5	6.3	7.2	chr9	34669748	34670439	(103724278)	+	MER21C	LTR/ERVL	133	817	(121)	4057766
204	38.8	3.9	0.0	chr9	36048646	36048743	(102345974)	+	L2b	LINE/L2	3230	3331	(44)	4059854
2039	26.4	5.6	6.8	chr9	36048804	36049415	(102345302)	C	MER21C	LTR/ERVL	(100)	838	233	4059855
376	29.9	6.9	0.2	chr9	38012270	38012471	(100382246)	+	MIR	SINE/MIR	19	242	(26)	4063788
185	28.2	10.5	3.4	chr9	38012512	38012599	(100382118)	C	MIR3	SINE/MIR	(60)	148	54	4063789
9917	20.8	3.0	4.9	chr9	69785773	69786218	(68608499)	C	L1M4	LINE/L1	(7055)	462	2	4082087
1800	21.2	0.0	0.3	chr9	70291868	70292193	(68102524)	C	L1M4	LINE/L1	(7188)	329	5	4082890
614	34.0	12.4	5.4	chr9	70544099	70544937	(67849780)	+	L3b	LINE/CR1	2603	3508	(591)	4083373
7649	20.8	3.1	3.4	chr9	77193646	77194911	(61199806)	C	L1PA15	LINE/L1	(5027)	1759	496	4093926
917	23.4	9.0	5.6	chr9	77236779	77236899	(61157818)	C	L1M4	LINE/L1	(6580)	287	169	4093997
2215	10.4	2.4	0.0	chr9	77236900	77237187	(61157530)	C	AluSc	SINE/Alu	(14)	295	1	4094003
698	28.9	6.9	2.9	chr9	82205488	82205836	(56188881)	C	L1MCc	LINE/L1	(6026)	397	34	4101198
379	18.4	0.0	1.9	chr9	83389836	83389940	(55004777)	C	MER112	DNA/hAT-Charlie	(1)	260	158	4102814
582	27.8	6.3	2.0	chr9	83390093	83390290	(55004427)	C	MIR	SINE/MIR	(46)	216	10	4102815
662	23.8	13.1	4.2	chr9	83649078	83649244	(54745473)	+	MER20B	DNA/hAT-Charlie	605	783	(0)	4103248
2394	10.3	0.3	0.0	chr9	88159080	88159389	(50235328)	C	AluSp	SINE/Alu	(2)	311	1	4110578
270	23.2	0.0	0.0	chr9	88159390	88159445	(50235272)	C	L1MD2	LINE/L1	(5573)	967	912	4110568
12272	18.5	4.8	3.5	chr9	91198890	91199096	(47195621)	+	L1MB7	LINE/L1	5	203	(7314)	4114859
2276	11.9	0.0	0.3	chr9	91199097	91199407	(47195310)	C	AluSq2	SINE/Alu	(3)	310	1	4114860
7121	15.6	6.3	4.0	chr9	92752774	92753508	(45641209)	+	L1MC3	LINE/L1	6999	7785	(0)	4117151
1557	25.7	5.1	1.3	chr9	93639626	93640074	(44754643)	C	L1M4b	LINE/L1	(6348)	519	53	4118413
198	38.2	3.5	0.0	chr9	95272945	95273054	(43121663)	C	MIR1_Amn	SINE/MIR	(93)	137	24	4120945
2568	18.9	8.9	2.1	chr9	95277513	95278164	(43116553)	+	L1M4b	LINE/L1	1959	2605	(4262)	4120953
186	28.4	8.3	10.2	chr9	98882189	98882286	(39512431)	+	OldhAT1	DNA/hAT-Ac	290	385	(2463)	4127411
699	27.8	4.4	0.5	chr9	98882216	98882432	(39512285)	C	L2c	LINE/L2	(1303)	2116	1891	4127405
1891	18.1	0.3	0.3	chr9	99647476	99647784	(38746933)	+	AluJr	SINE/Alu	1	309	(3)	4128869
7436	20.0	5.9	5.1	chr9	99647785	99648914	(38745803)	+	L1M4	LINE/L1	163	1319	(6198)	4128868
1104	29.6	6.7	4.5	chr9	99920047	99920598	(38474119)	+	MLT1L	LTR/ERVL-MaLR	41	605	(5)	4129303
11096	13.9	3.3	6.9	chr9	101391471	101394002	(37000715)	+	L1M2	LINE/L1	2268	4704	(1439)	4131626
529	30.6	19.1	1.8	chr9	101413389	101414046	(36980671)	C	L2	LINE/L2	(683)	2736	1938	4131651
4056	8.9	3.3	1.1	chr9	105121651	105122217	(33272500)	C	LTR19B	LTR/ERV1	(0)	580	1	4136938
420	23.8	14.0	2.0	chr9	113739434	113739583	(24655134)	C	MIRc	SINE/MIR	(86)	182	12	4152299
664	33.9	3.6	2.4	chr9	113748041	113748454	(24646263)	C	L1M7	LINE/L1	(1173)	5041	4623	4152316
2087	27.2	8.0	0.7	chr9	113833186	113833756	(24560961)	+	L1M4	LINE/L1	1	616	(6901)	4152479
14	14.7	0.0	3.1	chr9	121651595	121651626	(16743091)	+	GA-rich	Low_complexity	1	32	(0)	4167463
327	34.2	7.0	3.4	chr9	123967156	123967388	(14427329)	C	L2c	LINE/L2	(5)	3382	3141	4171618
668	27.6	11.6	4.3	chr9	123967397	123967722	(14426995)	C	MLT1H	LTR/ERVL-MaLR	(8)	541	189	4171619
1617	22.0	12.6	1.1	chr9	125455842	125456440	(12938277)	C	L1MEg	LINE/L1	(4542)	1858	1216	4174727
4674	15.9	10.4	0.9	chr9	125575538	125576467	(12818250)	+	L1MC2	LINE/L1	5316	6344	(0)	4174915
2219	10.2	0.3	3.5	chr9	126028610	126028924	(12365793)	C	AluSq2	SINE/Alu	(8)	305	1	4175714
806	27.5	4.9	5.8	chr9	126028927	126029273	(12365444)	C	MLT1H	LTR/ERVL-MaLR	(205)	344	1	4175712
388	36.0	0.7	0.7	chr9	126664913	126665049	(11729668)	+	MIRb	SINE/MIR	93	229	(39)	4176792
39	29.1	1.2	4.1	chr9	127785978	127786147	(10608570)	+	(GGC)n	Simple_repeat	1	172	(0)	4179014
15	17.3	5.2	4.9	chr9	128882181	128882238	(9512479)	+	(CGGC)n	Simple_repeat	1	61	(0)	4181567
1738	14.1	0.0	0.0	chr9	129505935	129506197	(8888520)	C	AluJb	SINE/Alu	(6)	306	44	4182994
658	20.1	12.4	2.3	chr9	129506198	129506370	(8888347)	+	L1MD2	LINE/L1	6112	6304	(55)	4182995
525	10.9	18.8	1.8	chr9	129506375	129506484	(8888233)	C	AluSq10	SINE/Alu	(180)	133	1	4182996
292	28.4	3.2	1.0	chr9	135814863	135814980	(2579737)	+	L2a	LINE/L2	2970	3094	(332)	4193655
4184	17.8	7.2	2.9	chr9	136069589	136070225	(2324492)	+	L1MDa	LINE/L1	2630	3320	(3217)	4193992
11	17.1	2.9	2.8	chr9	136363573	136363607	(2031110)	+	(GCCCCA)n	Simple_repeat	1	36	(0)	4194302
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
19	14.1	2.6	0.0	chr9	136687298	136687336	(1707381)	+	(CAG)n	Simple_repeat	1	40	(0)	4194650
482	17.1	7.1	0.0	chrX	5522813	5522929	(150517966)	+	L1MD1	LINE/L1	6106	6231	(11)	4368626
1986	16.4	0.3	0.0	chrX	5523111	5523414	(150517481)	C	AluJb	SINE/Alu	(6)	306	2	4368627
635	25.1	2.8	2.8	chrX	10491090	10491265	(145549630)	C	MER58C	DNA/hAT-Charlie	(1)	214	39	4376561
605	30.7	9.7	6.7	chrX	10491271	10491432	(145549463)	C	L1ME1	LINE/L1	(2953)	3193	3036	4376557
885	14.7	0.0	0.0	chrX	10491433	10491548	(145549347)	C	AluJo	SINE/Alu	(196)	116	1	4376562
14	4.5	4.3	0.0	chrX	15788283	15788305	(140252590)	+	(ATG)n	Simple_repeat	1	24	(0)	4384965
498	27.4	5.0	5.0	chrX	15788306	15788505	(140252390)	C	MIR	SINE/MIR	(2)	260	61	4384966
18691	14.8	2.7	1.4	chrX	18278179	18281429	(137759466)	+	L1PA16	LINE/L1	46	3833	(3082)	4389204
1249	27.1	3.9	11.1	chrX	18821820	18822407	(137218488)	C	LTR41C	LTR/ERVL	(153)	548	5	4390217
4522	22.4	8.2	1.0	chrX	20248667	20250195	(135790700)	C	L1MD2	LINE/L1	(27)	6723	5100	4392833
442	27.6	12.0	9.8	chrX	20341650	20342078	(135698817)	+	MLT1O	LTR/ERVL-MaLR	86	525	(17)	4392983
2453	21.0	12.4	3.0	chrX	23728433	23729628	(132311267)	+	L1MC4	LINE/L1	6403	7902	(140)	4397917
2379	9.4	1.0	0.0	chrX	23946583	23946890	(132094005)	+	AluSp	SINE/Alu	1	311	(2)	4398452
1761	15.1	0.7	5.6	chrX	23946986	23947289	(132093606)	+	AluJb	SINE/Alu	1	289	(23)	4398453
2117	24.8	6.5	5.2	chrX	24334114	24334838	(131706057)	C	MER21C	LTR/ERVL	(96)	842	14	4399325
4882	15.8	1.8	1.4	chrX	33560887	33561596	(122479299)	C	L1PA16	LINE/L1	(390)	5776	5069	4412738
9893	13.5	4.1	0.6	chrX	34190976	34193916	(121846979)	C	L1MA2	LINE/L1	(2729)	4836	1784	4413489
1096	24.9	7.7	10.4	chrX	37896325	37896889	(118144006)	+	MLT1H	LTR/ERVL-MaLR	1	548	(1)	4418114
973	26.2	2.7	8.7	chrX	37896890	37897202	(118143693)	C	L2a	LINE/L2	(178)	3248	2957	4418113
231	37.0	3.4	10.8	chrX	38088754	38089226	(117951669)	C	L2c	LINE/L2	(15)	3372	2936	4418409
267	31.7	13.4	0.8	chrX	38371587	38371710	(117669185)	C	MIRb	SINE/MIR	(125)	143	2	4418854
10477	17.5	4.8	2.1	chrX	40973295	40973982	(115066913)	C	L1M4b	LINE/L1	(6175)	692	3	4423402
1140	19.1	9.4	9.9	chrX	41024851	41025043	(115015852)	+	LTR41	LTR/ERVL	148	342	(426)	4423520
2022	12.7	0.7	1.6	chrX	41025055	41025361	(115015534)	C	AluJo	SINE/Alu	(7)	305	2	4423522
240	22.8	19.8	0.0	chrX	41104562	41104662	(114936233)	+	Charlie30a	DNA/hAT-Charlie	103	228	(563)	4423685
682	17.1	10.2	0.6	chrX	41106301	41106459	(114934436)	C	L1MB4	LINE/L1	(4317)	2550	2375	4423687
2185	10.0	0.4	0.4	chrX	41106523	41106830	(114934065)	C	AluSx1	SINE/Alu	(0)	312	1	4423688
564	26.2	4.3	7.1	chrX	41146501	41146869	(114894026)	C	L1M5	LINE/L1	(610)	5513	5153	4423750
5859	21.3	5.5	2.0	chrX	42030575	42033885	(114007010)	C	L1M4b	LINE/L1	(3451)	3555	2	4425409
917	20.8	9.7	0.4	chrX	42082215	42082456	(113958439)	C	LTR16C	LTR/ERVL	(1)	488	222	4425482
22472	7.7	1.0	1.4	chrX	44252831	44258609	(111782286)	+	L1PA7	LINE/L1	1	5788	(681)	4428524
2353	6.0	4.7	0.3	chrX	44947392	44947675	(111093220)	C	AluY	SINE/Alu	(14)	297	1	4430073
1769	24.8	4.8	1.6	chrX	45532562	45533000	(110507895)	+	L1M4b	LINE/L1	1	454	(6413)	4430902
865	24.3	10.2	8.1	chrX	46505807	46505988	(109534907)	+	L1M4	LINE/L1	166	368	(7149)	4432248
3092	16.4	3.7	3.4	chrX	46689608	46690937	(109349958)	C	L1PA8	LINE/L1	(4)	6168	4821	4432577
909	21.5	5.9	0.5	chrX	46691021	46691230	(109349665)	C	L1M4a2	LINE/L1	(2432)	224	3	4432578
2013	17.7	1.0	1.0	chrX	46928573	46928761	(109112134)	C	AluJr4	SINE/Alu	(1)	311	122	4433072
26	21.7	0.0	0.0	chrX	47218894	47218952	(108821943)	+	(CGC)n	Simple_repeat	1	59	(0)	4433620
16	22.5	1.6	6.2	chrX	47219042	47219105	(108821790)	+	(GCC)n	Simple_repeat	1	65	(0)	4433621
14	14.6	0.0	3.1	chrX	53320590	53320621	(102720274)	+	(CGCC)n	Simple_repeat	1	32	(0)	4443474
776	18.4	8.2	2.1	chrX	53480528	53480582	(102560313)	+	L1MEc	LINE/L1	740	796	(5604)	4443865
5568	10.3	1.0	1.1	chrX	53480583	53481366	(102559529)	+	LTR1	LTR/ERV1	1	783	(0)	4443871
55870	4.6	1.6	1.3	chrX	53513138	53514245	(102526650)	+	Harlequin-int	LTR/ERV1	1	1124	(5772)	4443947
3377	22.8	7.7	2.6	chrX	53755608	53756240	(102284655)	C	L1M4b	LINE/L1	(6151)	716	8	4444364
1879	30.9	7.6	0.4	chrX	63465477	63466237	(92574658)	C	L1M4	LINE/L1	(6692)	825	6	4450181
5820	20.9	5.2	6.3	chrX	65478338	65479367	(90561528)	C	L1MA6	LINE/L1	(6371)	1350	359	4452354
2283	11.7	0.0	0.0	chrX	65479368	65479666	(90561229)	C	AluSq2	SINE/Alu	(13)	300	2	4452373
3150	23.5	12.1	2.5	chrX	66931351	66932531	(89108364)	C	L1M4b	LINE/L1	(3955)	2912	1588	4454286
270	24.2	17.5	1.0	chrX	69221200	69221299	(86819596)	C	MIRb	SINE/MIR	(12)	256	137	4457791
12	25.6	2.4	0.0	chrX	71068325	71068366	(84972529)	+	G-rich	Low_complexity	1	43	(0)	4460743
17	5.3	12.5	0.0	chrX	71068423	71068462	(84972433)	+	(GCAC)n	Simple_repeat	1	45	(0)	4460744
913	26.5	7.6	0.9	chrX	73586012	73586302	(82454593)	+	MER102b	DNA/hAT-Charlie	7	341	(0)	4464600
353	21.4	2.8	6.4	chrX	73586359	73586468	(82454427)	+	MIRb	SINE/MIR	87	192	(76)	4464601
16170	10.2	2.8	1.4	chrX	73892230	73895710	(82145185)	+	L1PA7	LINE/L1	1	3508	(2953)	4464872
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
10519	20.1	6.3	4.6	chrX	74514038	74516045	(81524850)	+	L1MDa	LINE/L1	48	2122	(4511)	4465763
16326	10.2	1.1	2.1	chrX	76178830	76183734	(79857161)	C	L1P3	LINE/L1	(1523)	4938	1	4467329
1686	18.3	1.6	3.9	chrX	98934036	98934533	(57106362)	C	L1M4b	LINE/L1	(692)	6346	5860	4492610
865	17.8	0.0	0.0	chrX	98934567	98934712	(57106183)	C	L1M4b	LINE/L1	(6620)	247	102	4492610
15	17.6	0.0	4.8	chrX	98934716	98934757	(57106138)	+	(ATATAG)n	Simple_repeat	1	42	(0)	4492612
314	26.8	0.0	2.8	chrX	101447359	101447446	(54593449)	C	L2b	LINE/L2	(4)	3422	3297	4496048
20802	12.3	3.3	1.4	chrX	102666809	102670324	(53370571)	C	L1PA10	LINE/L1	(2960)	3501	10	4497484
324	32.9	9.3	0.0	chrX	103639391	103639538	(52401357)	+	MIR3	SINE/MIR	15	175	(87)	4498933
15	11.7	0.0	0.0	chrX	104166475	104166502	(51874393)	+	(GGCCG)n	Simple_repeat	1	28	(0)	4499664
1181	14.9	1.1	4.1	chrX	107666842	107667035	(48373860)	C	AluJr	SINE/Alu	(124)	188	1	4504597
229	34.2	4.4	6.2	chrX	107667038	107667411	(48373484)	+	L2-3_Crp	LINE/L2	719	1085	(1011)	4504598
5207	23.9	8.0	3.9	chrX	109133013	109135485	(46905410)	+	L1M4b	LINE/L1	24	2605	(4262)	4506529
840	26.8	4.9	1.8	chrX	120123469	120123802	(35917093)	+	HAL1b	LINE/L1	2021	2365	(56)	4522481
1770	26.8	3.5	0.2	chrX	126329099	126329536	(29711359)	C	L1M4	LINE/L1	(7064)	453	1	4531038
3993	23.5	3.2	2.9	chrX	128341879	128342678	(27698217)	+	L1M4	LINE/L1	105	898	(6722)	4533203
1653	23.6	12.5	1.7	chrX	130586149	130586787	(25454108)	+	L1ME3D	LINE/L1	5514	6231	(11)	4536769
2809	22.5	0.8	0.0	chrX	130972768	130973357	(25067538)	C	L1M4	LINE/L1	(6908)	609	15	4537378
6679	20.6	3.1	2.7	chrX	130973361	130974859	(25066036)	C	L1M4b	LINE/L1	(5315)	1552	47	4537379
1874	19.8	0.0	0.0	chrX	134025521	134025828	(22015067)	+	AluJb	SINE/Alu	1	308	(4)	4541985
972	28.4	14.2	1.7	chrX	134025829	134026154	(22014741)	C	L2a	LINE/L2	(141)	3285	2896	4541984
430	25.1	9.7	2.9	chrX	136304339	136304510	(19736385)	C	L1ME4b	LINE/L1	(22)	870	686	4545757
555	25.4	2.9	3.6	chrX	136304520	136304658	(19736237)	C	L2b	LINE/L2	(1)	3374	3237	4545758
11447	18.7	7.5	2.3	chrX	136696651	136699370	(19341525)	+	L1M4b	LINE/L1	105	2967	(3900)	4546422
3008	25.8	5.0	2.3	chrX	138730346	138732758	(17308137)	+	L1ME2	LINE/L1	2520	6959	(0)	4549653
3464	20.6	4.2	2.7	chrX	146731608	146732743	(9308152)	C	L1MB7	LINE/L1	(3818)	3031	1295	4560877
1928	23.1	9.1	0.9	chrX	149250484	149251046	(6789849)	C	L1M4	LINE/L1	(6902)	615	2	4564357
2992	21.4	8.5	6.5	chrX	150578528	150579005	(5461890)	C	L1ME2z	LINE/L1	(1139)	5007	4515	4566126
2471	8.6	0.0	0.0	chrX	150662322	150662623	(5378272)	C	AluSq2	SINE/Alu	(11)	302	1	4566260
5379	15.9	5.2	3.2	chrX	150992732	150993453	(5047442)	+	L1MB8	LINE/L1	4750	5474	(704)	4566889
5692	12.0	2.1	1.0	chrX	153361520	153362413	(2678482)	+	MER49	LTR/ERV1	1	904	(19)	4570160
1140	26.1	6.5	3.0	chrX	153616322	153616875	(2424020)	+	L1MC4	LINE/L1	7043	7744	(298)	4570483
822	12.1	0.0	5.3	chrX	153731065	153731179	(2309716)	C	AluJo	SINE/Alu	(195)	117	3	4570663
1755	28.8	8.5	5.6	chrX	153731180	153732321	(2308574)	C	L1MEd	LINE/L1	(5517)	1569	387	4570661
14	23.4	0.0	2.4	chrX	153971840	153971881	(2069014)	+	(GGC)n	Simple_repeat	1	42	(0)	4570996
1688	17.2	0.0	6.3	chrX	154085140	154085470	(1955425)	+	AluJr	SINE/Alu	2	311	(1)	4571229
12	15.3	5.3	2.5	chrX	154370549	154370586	(1670309)	+	(CTGCCCA)n	Simple_repeat	1	40	(0)	4571754
13	13.2	0.0	0.0	chrX	154370687	154370711	(1670184)	+	(CCAG)n	Simple_repeat	1	25	(0)	4571755
13	0.0	0.0	0.0	chrX	154490487	154490503	(1550392)	+	(GCG)n	Simple_repeat	1	17	(0)	4571926
12	26.2	1.5	6.0	chrX	154546877	154546942	(1493953)	+	(GGCGG)n	Simple_repeat	1	67	(0)	4572046