3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
13	16.7	4.8	2.3	chr1	1000441	1000482	(247955940)	+	G-rich	Low_complexity	1	44	(0)	1255
2500	7.6	0.0	0.0	chr1	2414971	2415273	(246541149)	C	AluY	SINE/Alu	(8)	303	1	3204
293	20.0	0.0	0.0	chr1	3257826	3257880	(245698542)	+	MER2	DNA/TcMar-Tigger	252	306	(39)	3862
196	32.2	2.2	1.7	chr1	3257924	3258032	(245698390)	C	L2b	LINE/L2	(18)	3408	3299	3863
14	16.2	0.0	0.0	chr1	7771353	7771380	(241185042)	+	(CGC)n	Simple_repeat	1	28	(0)	10295
1378	22.4	8.0	1.6	chr1	10077079	10077442	(238878980)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	74	15046
298	24.6	8.4	9.6	chr1	10077447	10077603	(238878819)	+	L2a	LINE/L2	3271	3425	(1)	15037
2744	18.0	6.8	6.2	chr1	10392514	10392637	(238563785)	+	L1M4a1	LINE/L1	1711	1836	(743)	15687
1458	17.4	9.3	0.8	chr1	10392638	10392902	(238563520)	+	AluJr4	SINE/Alu	1	290	(22)	15696
2744	18.0	6.8	6.2	chr1	10392903	10392989	(238563433)	+	L1M4a1	LINE/L1	1837	1904	(675)	15687
2271	11.6	0.3	0.0	chr1	10392990	10393291	(238563131)	+	AluSp	SINE/Alu	1	303	(10)	15697
322	34.1	10.6	5.3	chr1	11013213	11013515	(237942907)	+	L2c	LINE/L2	3066	3386	(1)	16859
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
23	25.8	1.2	3.5	chr1	13749494	13749577	(235206845)	+	(GCCC)n	Simple_repeat	1	85	(0)	21987
261	33.0	2.1	0.0	chr1	15100686	15100776	(233855646)	+	MIRb	SINE/MIR	13	105	(163)	24541
269	28.6	10.5	0.3	chr1	15218407	15218554	(233737868)	+	MIR	SINE/MIR	3	160	(70)	24803
3193	15.4	2.8	0.8	chr1	15218556	15219080	(233737342)	+	MER66C	LTR/ERV1	1	536	(19)	24804
516	18.9	4.0	1.0	chr1	15272101	15272226	(233684196)	+	MIRb	SINE/MIR	38	165	(43)	24906
1397	15.3	1.6	3.6	chr1	15624456	15624705	(233331717)	C	AluJb	SINE/Alu	(3)	309	65	25699
2007	15.2	0.3	0.0	chr1	16611991	16612287	(232344135)	C	AluJb	SINE/Alu	(12)	300	3	27818
185	33.3	18.5	0.0	chr1	16963321	16963479	(231992943)	C	L2	LINE/L2	(367)	3052	2858	28376
194	27.7	0.0	0.0	chr1	16963728	16963774	(231992648)	+	MIR	SINE/MIR	35	81	(181)	28377
457	32.6	10.1	4.3	chr1	19785925	19785976	(229170446)	C	L2c	LINE/L2	(85)	3302	3251	34473
1578	14.4	6.4	6.7	chr1	19785977	19786289	(229170133)	+	AluJo	SINE/Alu	1	312	(0)	34475
1625	14.6	8.0	0.8	chr1	20784943	20785210	(228171212)	C	AluJb	SINE/Alu	(22)	290	2	36556
242	14.4	21.1	6.7	chr1	21441379	21441426	(227514996)	C	L1ME3A	LINE/L1	(15)	6158	6103	37927
1963	17.1	0.0	0.0	chr1	21441427	21441725	(227514697)	+	AluJb	SINE/Alu	3	301	(11)	37928
242	14.4	21.1	6.7	chr1	21441726	21441780	(227514642)	C	L1ME3A	LINE/L1	(71)	6102	6036	37927
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
451	34.7	4.7	4.1	chr1	22712098	22712342	(226244080)	C	MIRc	SINE/MIR	(17)	251	4	40749
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
19	24.5	0.0	1.8	chr1	23019614	23019668	(225936754)	+	(GGC)n	Simple_repeat	1	55	(0)	41476
17	15.1	6.8	0.0	chr1	23168708	23168751	(225787671)	+	(CCG)n	Simple_repeat	1	47	(0)	41760
1847	10.1	5.8	0.4	chr1	23169083	23169359	(225787063)	+	AluJb	SINE/Alu	7	299	(13)	41761
252	25.0	1.6	0.0	chr1	24909468	24909527	(224046895)	+	MIRc	SINE/MIR	123	183	(85)	45975
236	36.9	1.7	4.2	chr1	24909863	24909988	(224046434)	C	MIR3	SINE/MIR	(89)	179	51	45976
254	34.1	7.5	0.1	chr1	25066623	25066767	(223889655)	C	MIRb	SINE/MIR	(90)	178	27	46302
121	5.0	10.1	0.0	chr1	26488460	26488668	(222467754)	+	(TA)n	Simple_repeat	1	230	(0)	49470
2477	8.2	0.3	0.0	chr1	26488702	26489006	(222467416)	C	AluSp	SINE/Alu	(7)	306	1	49471
12	11.3	6.9	0.0	chr1	27012628	27012656	(221943766)	+	(CCGCT)n	Simple_repeat	1	31	(0)	50691
2186	11.3	0.0	0.0	chr1	27169731	27170038	(221786384)	C	AluSx1	SINE/Alu	(0)	312	1	51102
238	32.9	11.5	0.0	chr1	27170060	27170205	(221786217)	+	L2c	LINE/L2	3223	3387	(0)	51103
2129	15.6	0.0	0.0	chr1	27170290	27170596	(221785826)	C	AluJb	SINE/Alu	(4)	308	2	51104
481	26.0	5.6	2.3	chr1	27170633	27170805	(221785617)	C	LTR33	LTR/ERVL	(7)	508	330	51105
2046	12.5	2.0	0.0	chr1	28293199	28293487	(220662935)	C	AluSz	SINE/Alu	(17)	295	1	53785
218	27.3	1.8	0.0	chr1	28293546	28293600	(220662822)	C	L2c	LINE/L2	(215)	3172	3117	53786
358	24.6	8.4	10.5	chr1	28293748	28293796	(220662626)	C	L1ME1	LINE/L1	(3)	6176	6125	53787
2215	9.4	0.7	0.7	chr1	28293797	28294094	(220662328)	C	AluSx1	SINE/Alu	(14)	298	1	53788
2219	10.4	0.0	0.3	chr1	28500808	28501114	(220455308)	C	AluSx1	SINE/Alu	(6)	306	1	54361
13	20.6	2.4	2.4	chr1	28518618	28518658	(220437764)	+	(GCGG)n	Simple_repeat	1	42	(0)	54411
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
1903	14.4	0.3	5.6	chr1	29321021	29321340	(219635082)	C	AluJr	SINE/Alu	(9)	303	1	56387
504	33.0	10.9	1.3	chr1	29321343	29321575	(219634847)	C	MIRb	SINE/MIR	(8)	260	3	56388
487	31.9	2.0	4.0	chr1	29321600	29321798	(219634624)	+	MIRb	SINE/MIR	64	258	(10)	56389
18	24.4	2.1	0.0	chr1	31239383	31239430	(217716992)	+	(CA)n	Simple_repeat	1	49	(0)	60220
21	22.4	3.6	3.5	chr1	31239640	31239729	(217716693)	+	(GCGCCGG)n	Simple_repeat	1	90	(0)	60221
243	20.9	7.4	0.0	chr1	31788876	31788957	(217167465)	C	MIRc	SINE/MIR	(54)	176	83	61315
2576	6.5	0.3	0.0	chr1	32017601	32017906	(216938516)	C	AluSp	SINE/Alu	(6)	307	1	61879
13	8.4	0.0	6.9	chr1	32408270	32408298	(216548124)	+	(CTA)n	Simple_repeat	1	29	(0)	62806
487	29.2	5.5	5.5	chr1	32408304	32408446	(216547976)	C	ERVL-E-int	LTR/ERVL	(2425)	3242	3103	62805
2319	9.7	0.3	0.3	chr1	32408447	32408744	(216547678)	C	AluSp	SINE/Alu	(15)	298	1	62807
6250	13.3	3.1	2.2	chr1	32448198	32449195	(216507227)	+	LTR13	LTR/ERVK	1	1007	(0)	62858
771	21.9	7.7	2.3	chr1	32500104	32500323	(216456099)	+	L1MB5	LINE/L1	5928	6160	(14)	62986
29	2.9	2.8	0.0	chr1	32500418	32500453	(216455969)	+	(GGGCGAGA)n	Simple_repeat	1	37	(0)	62987
15	0.0	0.0	0.0	chr1	32500491	32500509	(216455913)	+	(GGC)n	Simple_repeat	1	19	(0)	62988
14	15.6	2.1	6.1	chr1	32500510	32500535	(216455887)	+	G-rich	Low_complexity	4	49	(0)	62989
12	24.8	0.0	0.0	chr1	32500698	32500731	(216455691)	+	(CCGG)n	Simple_repeat	1	34	(0)	62990
931	25.8	4.5	3.9	chr1	32500964	32501270	(216455152)	C	L1MC4	LINE/L1	(494)	7548	7240	62991
185	29.1	17.7	4.2	chr1	33350207	33350371	(215606051)	C	MIR	SINE/MIR	(2)	260	69	64946
199	22.5	0.0	0.0	chr1	33350423	33350462	(215605960)	+	MIR	SINE/MIR	219	258	(4)	64944
13	14.1	4.7	4.4	chr1	34985166	34985208	(213971214)	+	(CCGCT)n	Simple_repeat	1	45	(0)	67785
263	21.8	20.3	1.2	chr1	34985603	34985766	(213970656)	+	MIRc	SINE/MIR	42	247	(21)	67786
2385	4.8	6.1	0.0	chr1	35641951	35642244	(213314178)	+	AluSp	SINE/Alu	1	313	(0)	69125
337	32.5	18.6	0.8	chr1	35882089	35882600	(213073822)	C	L2	LINE/L2	(889)	2530	1907	69698
187	28.8	5.7	1.5	chr1	35882649	35882715	(213073707)	+	L2b	LINE/L2	3283	3352	(35)	69687
13	11.6	12.2	1.8	chr1	35883203	35883251	(213073171)	+	(CTGGCAG)n	Simple_repeat	1	55	(0)	69699
21	12.9	2.3	2.2	chr1	35883255	35883298	(213073124)	+	(GCG)n	Simple_repeat	1	45	(0)	69700
1933	10.4	8.7	6.3	chr1	36308971	36309194	(212647228)	C	Tigger4b	DNA/TcMar-Tigger	(95)	266	44	70612
2077	12.4	3.6	0.0	chr1	36309195	36309485	(212646937)	C	AluSz6	SINE/Alu	(10)	302	1	70614
2568	6.2	0.7	0.0	chr1	37939435	37939742	(211016680)	C	AluY	SINE/Alu	(1)	310	1	73766
961	16.9	1.2	0.6	chr1	37939745	37939904	(211016518)	C	AluJo	SINE/Alu	(15)	297	137	73767
208	32.4	7.2	1.1	chr1	37990316	37990440	(210965982)	+	MIR3	SINE/MIR	15	154	(114)	73868
513	29.2	7.6	1.4	chr1	38489808	38490029	(210466393)	C	LTR79	LTR/ERVL	(30)	497	261	74751
18	6.5	2.9	2.9	chr1	39105322	39105355	(209851067)	+	(GCC)n	Simple_repeat	1	35	(0)	76100
2586	4.6	0.0	0.7	chr1	39559788	39560089	(209396333)	C	AluY	SINE/Alu	(11)	300	1	76931
468	29.6	4.3	2.5	chr1	40476821	40477024	(208479398)	+	L2a	LINE/L2	3201	3408	(18)	78878
37	2.6	0.0	0.0	chr1	40477027	40477065	(208479357)	+	(TGAA)n	Simple_repeat	1	39	(0)	78889
360	30.4	6.5	0.7	chr1	41657669	41657814	(207298608)	C	MIRb	SINE/MIR	(92)	176	22	81173
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
15	25.3	2.6	5.1	chr1	43707772	43707848	(205248574)	+	G-rich	Low_complexity	1	79	(0)	84748
234	28.8	1.5	0.0	chr1	43836435	43836500	(205119922)	C	L2b	LINE/L2	(20)	3355	3289	85014
309	27.9	9.2	0.1	chr1	43836825	43836942	(205119480)	C	MIR3	SINE/MIR	(99)	169	40	85015
17	24.9	3.5	0.0	chr1	44030752	44030808	(204925614)	+	(GGCA)n	Simple_repeat	1	59	(0)	85305
1717	15.4	4.3	4.3	chr1	44360271	44360575	(204595847)	C	AluJb	SINE/Alu	(7)	305	1	85881
792	25.0	12.6	0.4	chr1	44484198	44484434	(204471988)	C	MLT1J2	LTR/ERVL-MaLR	(178)	270	1	86109
183	26.4	5.3	2.7	chr1	44576316	44576389	(204380033)	C	L3	LINE/CR1	(1623)	2476	2401	86293
19	17.2	0.0	0.0	chr1	44576856	44576894	(204379528)	+	(CTCAT)n	Simple_repeat	1	39	(0)	86294
295	29.7	0.2	0.2	chr1	44739481	44739574	(204216848)	C	MIRb	SINE/MIR	(161)	107	8	86611
2259	15.6	3.6	5.3	chr1	45200869	45201343	(203755079)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	87509
220	17.4	4.2	0.0	chr1	45687561	45687606	(203268816)	C	MIR3	SINE/MIR	(80)	128	81	88537
1965	10.6	0.3	7.8	chr1	45761577	45761711	(203194711)	C	AluSx	SINE/Alu	(179)	133	1	88696
42462	5.8	0.8	0.5	chr1	45761712	45762201	(203194221)	C	HERVIP10B3-int	LTR/ERV1	(7113)	490	1	88694
2546	6.8	0.0	0.3	chr1	46397553	46397862	(202558560)	C	AluSx1	SINE/Alu	(3)	309	1	89974
446	14.9	2.9	0.0	chr1	46397864	46397930	(202558492)	C	AluSx	SINE/Alu	(167)	145	77	89975
2337	10.2	0.0	0.3	chr1	46397931	46398234	(202558188)	C	AluSx1	SINE/Alu	(9)	303	1	89976
22	32.6	1.2	1.2	chr1	46520448	46520532	(202435890)	+	(CA)n	Simple_repeat	1	86	(0)	90185
194	29.4	0.0	7.6	chr1	47179564	47179655	(201776767)	C	L2c	LINE/L2	(46)	3341	3257	91049
362	32.4	9.3	0.6	chr1	47179845	47180021	(201776401)	C	MIRb	SINE/MIR	(68)	200	7	91050
275	30.5	19.0	0.5	chr1	47313393	47313593	(201642829)	+	L2c	LINE/L2	2910	3156	(231)	91313
329	29.9	3.6	6.3	chr1	47986615	47986757	(200969665)	C	L2c	LINE/L2	(211)	3176	3038	92686
276	22.1	2.3	0.0	chr1	50333392	50333477	(198622945)	C	MIRc	SINE/MIR	(136)	132	45	96596
17	15.0	4.3	2.1	chr1	50978056	50978101	(197978321)	+	G-rich	Low_complexity	1	48	(0)	97722
539	31.3	6.8	9.2	chr1	51320126	51320406	(197636016)	+	HAL1	LINE/L1	1892	2138	(369)	98429
1909	11.4	1.0	10.8	chr1	51320407	51320747	(197635675)	C	AluJb	SINE/Alu	(0)	312	6	98431
1756	13.5	0.0	12.9	chr1	51613727	51614082	(197342340)	C	AluJb	SINE/Alu	(2)	310	1	99101
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
44476	8.4	0.9	0.6	chr1	52220076	52225369	(196731053)	C	HERVIP10B3-int	LTR/ERV1	(2333)	5270	1	100420
1107	21.5	5.2	0.0	chr1	52225371	52225626	(196730796)	C	LTR10B2	LTR/ERV1	(0)	503	234	100420
507	29.7	14.7	2.9	chr1	52365191	52365731	(196590691)	C	L2b	LINE/L2	(13)	3362	2745	100698
13	15.2	2.5	4.9	chr1	52365969	52366008	(196590414)	+	(CCGCG)n	Simple_repeat	1	41	(0)	100699
1325	22.2	10.5	2.2	chr1	52601457	52601866	(196354556)	+	LTR16A	LTR/ERVL	4	451	(0)	101223
2177	10.5	1.7	3.0	chr1	52946776	52947079	(196009343)	+	AluSx1	SINE/Alu	2	301	(11)	102154
847	18.0	4.8	1.9	chr1	52947101	52947261	(196009161)	+	AluJr	SINE/Alu	137	302	(10)	102155
344	26.1	6.3	2.2	chr1	52969990	52970216	(195986206)	C	L1PREC2	LINE/L1	(3130)	3016	2780	102221
618	23.8	7.4	0.0	chr1	52970273	52970398	(195986024)	C	FAM	SINE/Alu	(34)	151	16	102222
992	27.1	7.5	7.8	chr1	52970471	52970968	(195985454)	C	L1MC4	LINE/L1	(5659)	556	58	102223
601	29.0	10.3	0.5	chr1	53330555	53330772	(195625650)	+	MIR	SINE/MIR	21	262	(0)	102886
340	38.7	8.2	0.0	chr1	53330904	53331151	(195625271)	+	L2c	LINE/L2	3106	3375	(12)	102887
1405	30.4	10.7	3.9	chr1	53489631	53489731	(195466691)	C	HAL1	LINE/L1	(1270)	1237	1141	103177
302	23.3	0.0	0.0	chr1	53489785	53489844	(195466578)	C	HAL1ME	LINE/L1	(1456)	1009	950	103181
494	19.7	4.5	5.9	chr1	53489845	53489979	(195466443)	C	HAL1	LINE/L1	(1652)	855	723	103177
444	32.4	8.7	1.4	chr1	54119030	54119305	(194837117)	+	L2	LINE/L2	2315	2612	(807)	104450
580	24.9	14.8	2.8	chr1	54715147	54715633	(194240789)	+	L2b	LINE/L2	2808	3373	(2)	105732
16986	12.8	3.2	1.3	chr1	56105976	56108814	(192847608)	+	L1PBa	LINE/L1	1	2906	(3957)	108193
291	36.7	3.9	0.0	chr1	56304744	56304890	(192651532)	C	L2c	LINE/L2	(237)	3150	2998	108571
887	14.1	0.0	2.0	chr1	56304893	56305044	(192651378)	+	L1PB1	LINE/L1	6002	6150	(1)	108572
21	3.5	0.0	0.0	chr1	56578777	56578805	(192377617)	+	(CGGCG)n	Simple_repeat	1	29	(0)	109121
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
19	16.7	3.4	4.9	chr1	56645326	56645384	(192311038)	+	(GGC)n	Simple_repeat	1	61	(0)	109245
14	19.4	2.3	2.3	chr1	58546475	58546517	(190409905)	+	(TCCCC)n	Simple_repeat	1	44	(0)	113060
232	28.1	0.0	0.0	chr1	59428589	59428652	(189527770)	+	MIRc	SINE/MIR	89	152	(116)	114855
185	25.9	7.9	0.0	chr1	59492121	59492178	(189464244)	+	L2a	LINE/L2	3266	3328	(98)	114959
1858	30.0	4.0	3.8	chr1	59492187	59493052	(189463370)	C	HAL1	LINE/L1	(1560)	947	80	114960
1068	26.7	12.1	0.6	chr1	60991481	60991976	(187964446)	+	L2a	LINE/L2	2610	3180	(246)	117471
308	25.8	9.1	1.6	chr1	60991990	60992111	(187964311)	+	L2a	LINE/L2	3269	3400	(26)	117471
15	19.2	4.1	2.0	chr1	61050196	61050245	(187906177)	+	(CCCTCT)n	Simple_repeat	1	51	(0)	117591
24	16.6	0.0	0.0	chr1	61057018	61057070	(187899352)	+	(CA)n	Simple_repeat	1	53	(0)	117597
21	13.3	2.4	0.0	chr1	61057293	61057333	(187899089)	+	(GCG)n	Simple_repeat	1	42	(0)	117598
2402	5.9	3.3	0.0	chr1	61057625	61057914	(187898508)	C	AluSq2	SINE/Alu	(13)	300	1	117599
24	12.1	0.0	0.0	chr1	61453444	61453479	(187502943)	+	(T)n	Simple_repeat	1	36	(0)	118160
760	23.8	24.0	0.7	chr1	61511335	61511695	(187444727)	+	LTR16	LTR/ERVL	1	495	(0)	118284
289	33.6	7.6	7.6	chr1	61973960	61974117	(186982305)	C	MER5A	DNA/hAT-Charlie	(16)	173	16	119210
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
253	25.0	1.4	4.2	chr1	63773658	63773728	(185182694)	C	MIR3	SINE/MIR	(109)	99	31	122678
225	24.1	11.3	0.2	chr1	63773691	63773791	(185182631)	+	MIR3	SINE/MIR	38	149	(81)	122679
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
601	28.8	3.8	1.0	chr1	64469493	64469699	(184486723)	+	MIRb	SINE/MIR	26	238	(30)	123958
17	17.4	2.5	0.0	chr1	64470366	64470405	(184486017)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	123959
266	18.8	0.9	0.0	chr1	64745611	64745674	(184210748)	C	MIR1_Amn	SINE/MIR	(89)	141	70	124433
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
12	16.8	0.0	0.0	chr1	65066925	65066951	(183889471)	+	(CCCCT)n	Simple_repeat	1	27	(0)	125014
15	7.5	0.0	6.2	chr1	65067136	65067167	(183889255)	+	(GGCCC)n	Simple_repeat	1	32	(0)	125015
11	18.1	2.4	4.8	chr1	65067257	65067297	(183889125)	+	(GCCCCCG)n	Simple_repeat	1	42	(0)	125016
20	16.0	0.0	0.0	chr1	65067870	65067904	(183888518)	+	(TG)n	Simple_repeat	1	35	(0)	125018
16	28.3	0.0	4.3	chr1	65793843	65793912	(183162510)	+	(TCCTCCT)n	Simple_repeat	1	70	(0)	126270
247	33.9	5.0	6.5	chr1	67502892	67503014	(181453408)	+	MER117	DNA/hAT-Charlie	77	197	(0)	129001
746	32.6	6.5	4.6	chr1	67503500	67503981	(181452441)	C	MLT1O	LTR/ERVL-MaLR	(23)	519	28	129002
6541	14.5	6.6	2.8	chr1	67597127	67597619	(181358803)	C	Tigger3b	DNA/TcMar-Tigger	(665)	566	1	129222
1850	13.9	0.3	2.8	chr1	67597620	67597923	(181358499)	C	MER33	DNA/hAT-Charlie	(19)	305	7	129221
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
183	36.6	6.8	2.4	chr1	70220282	70220407	(178736015)	C	L2b	LINE/L2	(332)	3055	2924	133039
14092	14.0	2.3	2.6	chr1	71847300	71848805	(177107617)	+	Tigger1	DNA/TcMar-Tigger	1	1472	(946)	135432
35	0.0	0.0	0.0	chr1	72282595	72282627	(176673795)	+	(T)n	Simple_repeat	1	33	(0)	136018
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
18	33.5	0.0	0.0	chr1	74732595	74732668	(174223754)	+	G-rich	Low_complexity	1	74	(0)	139078
13	14.9	7.9	0.0	chr1	75582452	75582490	(173373932)	+	(GGACCAA)n	Simple_repeat	1	42	(0)	140138
62	3.3	0.0	0.0	chr1	75615417	75615478	(173340944)	+	(AC)n	Simple_repeat	1	62	(0)	140184
16	5.3	0.0	0.0	chr1	75615479	75615498	(173340924)	+	(GA)n	Simple_repeat	1	20	(0)	140185
18	12.0	0.0	5.0	chr1	75616022	75616061	(173340361)	+	(CGGCT)n	Simple_repeat	1	40	(0)	140186
23	22.0	3.2	0.0	chr1	75616111	75616185	(173340237)	+	(TGC)n	Simple_repeat	1	77	(0)	140187
15	22.0	0.0	2.3	chr1	75616217	75616291	(173340131)	+	(CCACCCC)n	Simple_repeat	1	73	(0)	140188
1418	15.0	13.4	0.0	chr1	75790710	75790942	(173165480)	C	AluSx	SINE/Alu	(43)	269	1	140460
819	19.2	0.0	0.0	chr1	75790965	75791089	(173165333)	C	AluJb	SINE/Alu	(187)	125	1	140457
1664	19.8	5.5	2.8	chr1	76597932	76598285	(172358137)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	2	141656
12	22.1	0.0	0.0	chr1	77281649	77281680	(171674742)	+	(GTGTGT)n	Simple_repeat	1	32	(0)	142614
12	20.6	1.7	8.3	chr1	77281880	77281938	(171674484)	+	(GCGCG)n	Simple_repeat	1	60	(0)	142615
18	7.7	0.0	0.0	chr1	77888599	77888626	(171067796)	+	(CGG)n	Simple_repeat	1	28	(0)	143695
9436	7.7	11.4	2.2	chr1	80052604	80054032	(168902390)	C	LTR12C	LTR/ERV1	(0)	1579	3	146673
324	20.3	0.0	7.8	chr1	80054033	80054080	(168902342)	+	HERVL18-int	LTR/ERVL	5224	5267	(780)	146672
250	17.8	0.0	0.0	chr1	80054081	80054125	(168902297)	+	HERVL18-int	LTR/ERVL	5946	5990	(57)	146672
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
2442	9.1	0.0	0.3	chr1	81374291	81374588	(167581834)	+	AluSx1	SINE/Alu	3	299	(13)	148363
698	30.9	12.6	2.3	chr1	81387681	81388389	(167568033)	C	L1MEg	LINE/L1	(4872)	1353	526	148382
858	21.1	13.8	6.3	chr1	81388484	81388816	(167567606)	+	MLT1A0	LTR/ERVL-MaLR	1	362	(3)	148383
202	30.4	0.0	1.2	chr1	81745203	81745282	(167211140)	C	MIRc	SINE/MIR	(0)	268	190	148931
305	24.9	9.9	2.0	chr1	81745301	81745433	(167210989)	+	MIRc	SINE/MIR	79	179	(51)	148932
855	16.9	0.0	0.0	chr1	81860353	81860476	(167095946)	C	AluJr	SINE/Alu	(188)	124	1	149091
37	15.9	0.0	0.0	chr1	84078068	84078133	(164878289)	+	(CCG)n	Simple_repeat	1	66	(0)	152037
355	26.1	6.8	1.8	chr1	84198699	84198866	(164757556)	C	L1ME4a	LINE/L1	(12)	6112	5936	152183
18	19.6	0.0	4.0	chr1	84621094	84621143	(164335279)	+	G-rich	Low_complexity	1	50	(0)	152806
29	0.0	0.0	0.0	chr1	84621265	84621289	(164335133)	+	(TG)n	Simple_repeat	1	25	(0)	152807
9171	16.0	6.1	5.0	chr1	85283609	85285342	(163671080)	+	MER52A	LTR/ERV1	1	1755	(0)	153937
1676	12.0	6.6	6.3	chr1	86172638	86172938	(162783484)	C	AluJb	SINE/Alu	(10)	302	1	155237
10822	11.8	2.0	0.4	chr1	86376886	86378486	(162577936)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	155517
6790	8.7	15.2	0.4	chr1	89079689	89080740	(159875682)	+	MER11B	LTR/ERVK	1	1236	(0)	159466
15	8.5	4.7	6.7	chr1	90851702	90851744	(158104678)	+	(GCCCC)n	Simple_repeat	1	45	(0)	161860
13	11.1	9.3	5.1	chr1	91885645	91885698	(157070724)	+	(CTGCCCCG)n	Simple_repeat	1	59	(0)	163408
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
17	17.2	0.0	7.5	chr1	91886335	91886345	(157070077)	+	(CTC)n	Simple_repeat	3	53	(0)	163410
38	0.0	0.0	2.7	chr1	92030450	92030486	(156925936)	+	(TG)n	Simple_repeat	1	37	(0)	163749
22	7.3	0.0	0.0	chr1	92030487	92030515	(156925907)	+	(AG)n	Simple_repeat	1	29	(0)	163750
303	37.0	6.1	1.6	chr1	92680024	92680210	(156276212)	+	L2a	LINE/L2	2699	2894	(525)	164865
3638	21.0	9.0	6.4	chr1	92680212	92681097	(156275325)	+	L1MC4	LINE/L1	6806	7763	(279)	164866
15	11.2	0.0	3.2	chr1	92784787	92784821	(156171601)	+	(CCGC)n	Simple_repeat	1	33	(0)	165066
4238	18.0	3.9	0.6	chr1	92795800	92796184	(156160238)	+	L1MB4	LINE/L1	5785	6173	(7)	165095
9456	12.6	3.6	5.4	chr1	92982191	92982662	(155973760)	+	Tigger1	DNA/TcMar-Tigger	977	1439	(979)	165466
1905	14.7	4.0	0.0	chr1	92982663	92982948	(155973474)	+	AluJb	SINE/Alu	1	298	(14)	165469
9456	12.6	3.6	5.4	chr1	92982949	92983114	(155973308)	+	Tigger1	DNA/TcMar-Tigger	1440	1594	(824)	165466
14	15.4	6.7	2.1	chr1	93680930	93680974	(155275448)	+	(CCTTC)n	Simple_repeat	1	48	(0)	166665
14	18.6	2.7	0.0	chr1	93681782	93681818	(155274604)	+	(GCTCCG)n	Simple_repeat	1	38	(0)	166666
15	12.2	0.0	0.0	chr1	93909201	93909227	(155047195)	+	(GCGG)n	Simple_repeat	1	27	(0)	167023
18	30.7	1.3	2.5	chr1	93909334	93909412	(155047010)	+	(CGG)n	Simple_repeat	1	80	(0)	167024
22	7.2	0.0	0.0	chr1	94685652	94685680	(154270742)	+	(AG)n	Simple_repeat	1	29	(0)	168136
40	12.8	3.9	0.0	chr1	94820301	94820377	(154136045)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	168365
17	15.9	4.8	0.0	chr1	95117298	95117339	(153839083)	+	(GCCGGA)n	Simple_repeat	1	44	(0)	168893
317	31.7	15.9	7.0	chr1	95117577	95117935	(153838487)	+	L1M4b	LINE/L1	208	604	(6263)	168894
1968	15.9	0.0	0.7	chr1	98091912	98092213	(150864209)	C	AluSz6	SINE/Alu	(12)	300	1	172937
393	30.6	6.1	3.3	chr1	99250712	99250981	(149705441)	C	MamGypLTR3a	LTR/Gypsy	(150)	831	554	174590
1654	18.5	0.0	0.3	chr1	99251006	99251293	(149705129)	C	LOR1a	LTR/ERV1	(102)	395	109	174591
662	15.8	2.6	0.9	chr1	100343667	100343781	(148612641)	+	Tigger2b_Pri	DNA/TcMar-Tigger	1	117	(951)	176429
851	16.2	14.8	1.6	chr1	100343778	100343965	(148612457)	+	Tigger2b_Pri	DNA/TcMar-Tigger	852	1068	(0)	176430
653	31.2	7.9	7.8	chr1	100344033	100344500	(148611922)	+	L2b	LINE/L2	2947	3387	(0)	176422
679	14.8	0.9	0.0	chr1	100440361	100440468	(148515954)	+	MER5A	DNA/hAT-Charlie	78	186	(3)	176591
3344	17.9	3.2	0.9	chr1	103211866	103212564	(145743858)	+	L1MB3	LINE/L1	5461	6176	(7)	180221
695	26.9	4.1	1.4	chr1	104188536	104188750	(144767672)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	181414
1084	28.3	8.9	5.0	chr1	104200806	104201247	(144755175)	+	MLT1C	LTR/ERVL-MaLR	7	467	(0)	181432
24	12.2	3.4	4.9	chr1	107964917	107964975	(140991447)	+	(GCC)n	Simple_repeat	1	61	(0)	186143
34	5.2	0.0	0.0	chr1	108560105	108560144	(140396278)	+	(GGC)n	Simple_repeat	1	40	(0)	186918
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
17	3.0	2.4	9.5	chr1	109397405	109397445	(139558977)	+	(CCCG)n	Simple_repeat	1	42	(0)	188515
13	18.3	4.3	4.1	chr1	109397924	109397970	(139558452)	+	(CCGC)n	Simple_repeat	1	49	(0)	188516
368	23.7	12.6	0.7	chr1	110390548	110390700	(138565722)	+	L1MC4	LINE/L1	7804	7977	(65)	190045
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
539	29.0	12.2	2.1	chr1	112675770	112676012	(136280410)	+	L3	LINE/CR1	3261	3531	(568)	193563
534	28.2	12.4	1.2	chr1	112987193	112987443	(135968979)	+	MER57F	LTR/ERV1	153	435	(0)	194207
1663	13.1	9.3	0.0	chr1	112987444	112987716	(135968706)	C	MLT1A0-int	LTR/ERVL-MaLR	(1156)	579	278	194206
382	26.7	0.7	3.6	chr1	113236430	113236569	(135719853)	C	L2	LINE/L2	(1230)	2189	2054	194724
2181	12.0	0.0	1.7	chr1	114497300	114497600	(134458822)	C	AluSq2	SINE/Alu	(17)	296	1	196694
2636	20.2	10.2	2.9	chr1	114497601	114497736	(134458686)	C	Cheshire	DNA/hAT-Charlie	(2271)	149	1	196693
301	30.0	5.5	2.6	chr1	114497739	114497933	(134458489)	+	HAL1	LINE/L1	749	949	(1558)	196695
1227	13.2	0.6	0.0	chr1	114497980	114498146	(134458276)	+	AluSx	SINE/Alu	135	302	(10)	196696
29	6.4	3.9	1.9	chr1	114511648	114511704	(134444718)	+	(TTTGTT)n	Simple_repeat	1	58	(0)	196727
1908	17.1	0.3	0.3	chr1	114565629	114565920	(134390502)	C	AluJo	SINE/Alu	(20)	292	1	196859
2150	25.3	9.6	3.6	chr1	114565921	114566244	(134390178)	C	HAL1	LINE/L1	(1525)	982	634	196858
2007	18.8	7.7	2.0	chr1	115024797	115025235	(133931187)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	2	197591
15	14.9	3.3	7.9	chr1	115089297	115089357	(133867065)	+	(GGCCCCC)n	Simple_repeat	1	63	(0)	197674
3673	16.8	0.7	1.1	chr1	115563569	115564315	(133392107)	+	L1MA4A	LINE/L1	3860	4603	(2959)	198376
25	16.9	0.0	0.0	chr1	115564394	115564441	(133391981)	+	(CGC)n	Simple_repeat	1	48	(0)	198380
33	28.2	1.3	5.1	chr1	115976370	115976524	(132979898)	+	(CCCGC)n	Simple_repeat	1	157	(0)	199010
12	26.5	0.0	4.1	chr1	116152164	116152212	(132804210)	+	(GCGCG)n	Simple_repeat	1	49	(0)	199232
18	19.0	0.0	0.0	chr1	116152659	116152696	(132803726)	+	A-rich	Low_complexity	1	38	(0)	199233
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
213	24.1	1.6	2.8	chr1	117060732	117060815	(131895607)	+	MIR3	SINE/MIR	64	147	(115)	200698
320	27.3	10.8	1.6	chr1	119328190	119328339	(129628083)	+	MamGypLTR3	LTR/Gypsy	724	952	(29)	203975
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
19	14.4	0.0	0.0	chr1	145280999	145281039	(103675383)	+	(G)n	Simple_repeat	1	41	(0)	210763
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
27	0.0	0.0	0.0	chr1	145425615	145425640	(103530782)	+	(AGGCGC)n	Simple_repeat	1	26	(0)	210934
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
1765	17.6	2.8	0.3	chr1	146560303	146560586	(102395836)	+	AluJo	SINE/Alu	2	292	(20)	212870
12	5.0	0.0	4.3	chr1	146560589	146560611	(102395811)	+	(AATA)n	Simple_repeat	1	23	(0)	212871
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
414	25.5	0.9	0.0	chr1	147669481	147669586	(101286836)	+	MER5A1	DNA/hAT-Charlie	44	150	(16)	214456
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
318	19.2	9.1	8.4	chr1	148361761	148361891	(100594531)	C	LTR75	LTR/ERVL	(430)	132	1	215560
320	20.0	7.1	0.0	chr1	148361892	148361955	(100594467)	+	MER45B	DNA/hAT-Tip100	312	380	(660)	215561
28	0.0	0.0	0.0	chr1	150364656	150364681	(98591741)	+	(CCG)n	Simple_repeat	1	26	(0)	218877
12	9.2	0.0	4.0	chr1	150364717	150364741	(98591681)	+	(GGC)n	Simple_repeat	1	25	(0)	218878
4691	15.3	2.4	0.2	chr1	150386455	150387241	(98569181)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(264)	804	1	218934
2092	11.4	0.7	0.0	chr1	150387568	150387889	(98568533)	C	AluSq2	SINE/Alu	(0)	313	1	218935
2263	3.8	2.4	3.4	chr1	150515965	150516257	(98440165)	+	AluSg7	SINE/Alu	1	290	(19)	219233
332	27.3	7.8	1.8	chr1	150919794	150919969	(98036453)	C	L2c	LINE/L2	(1)	3374	3207	220120
538	21.4	7.3	2.8	chr1	150920011	150920154	(98036268)	+	MER5A	DNA/hAT-Charlie	1	151	(38)	220121
2548	3.9	2.2	0.7	chr1	150925525	150925830	(98030592)	C	AluY	SINE/Alu	(0)	311	1	220138
15	12.9	5.0	7.9	chr1	150926373	150926432	(98029990)	+	(CTTCCC)n	Simple_repeat	1	63	(0)	220139
2404	9.6	0.0	0.0	chr1	151007226	151007527	(97948895)	+	AluSc	SINE/Alu	3	304	(5)	220296
16	23.2	0.0	2.1	chr1	151048681	151048727	(97907695)	+	(CACCAC)n	Simple_repeat	1	47	(0)	220394
265	26.5	0.0	12.6	chr1	151443894	151443988	(97512434)	C	MER119	DNA/hAT-Charlie	(29)	554	472	221217
309	27.7	10.6	1.0	chr1	151444011	151444112	(97512310)	C	MER119	DNA/hAT-Charlie	(449)	134	22	221217
1320	10.2	24.7	0.0	chr1	151456671	151456896	(97499526)	+	AluSx	SINE/Alu	1	300	(12)	221249
2787	17.5	31.0	2.0	chr1	151456897	151457130	(97499292)	C	Charlie1a	DNA/hAT-Charlie	(1151)	304	2	221247
1111	16.5	0.0	0.0	chr1	152006640	152006803	(96949619)	+	AluJb	SINE/Alu	133	296	(16)	222259
12	13.9	11.9	3.0	chr1	152048316	152048374	(96908048)	+	(GGCTGT)n	Simple_repeat	1	66	(0)	222321
13	28.8	0.0	0.0	chr1	152110928	152110973	(96845449)	+	(CTGCTC)n	Simple_repeat	1	46	(0)	222409
244	29.8	11.3	4.9	chr1	153356635	153356881	(95599541)	C	L2c	LINE/L2	(60)	3327	3063	223953
21	25.1	1.6	0.0	chr1	153946317	153946377	(95010045)	+	(GGCG)n	Simple_repeat	1	62	(0)	225116
12	17.9	5.0	2.4	chr1	153946514	153946553	(95009869)	+	(CGCTG)n	Simple_repeat	1	42	(0)	225117
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
500	19.5	2.3	3.0	chr1	155140262	155140393	(93816029)	+	L1M1	LINE/L1	325	455	(7110)	227424
15	17.7	0.0	0.0	chr1	155140823	155140854	(93815568)	+	(ATTC)n	Simple_repeat	1	32	(0)	227425
12	18.3	0.0	3.0	chr1	155255459	155255491	(93700931)	+	G-rich	Low_complexity	1	33	(0)	227628
11	13.2	5.7	2.7	chr1	156054978	156055012	(92901410)	+	(CGAGCGG)n	Simple_repeat	1	37	(0)	229385
231	28.1	15.1	1.0	chr1	156457093	156457189	(92499233)	C	L2c	LINE/L2	(14)	3373	3261	230180
326	34.8	11.4	1.4	chr1	156572876	156573482	(92382940)	C	L2c	LINE/L2	(41)	3346	2686	230361
30	25.3	3.2	0.0	chr1	156652289	156652382	(92304040)	+	GA-rich	Low_complexity	1	97	(0)	230526
14	4.5	4.3	0.0	chr1	156693381	156693403	(92263019)	+	(TCC)n	Simple_repeat	1	24	(0)	230586
13	21.5	1.9	5.5	chr1	156693438	156693491	(92262931)	+	(TCCCC)n	Simple_repeat	1	55	(0)	230587
188	27.6	6.5	0.0	chr1	156930985	156931042	(92025380)	C	MIRc	SINE/MIR	(57)	211	150	231004
12	20.4	0.0	2.8	chr1	157045373	157045408	(91911014)	+	(CTCCCT)n	Simple_repeat	1	36	(0)	231175
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
14	21.3	2.2	2.2	chr1	157046335	157046379	(91910043)	+	(CCCGTG)n	Simple_repeat	1	46	(0)	231179
488	18.9	8.6	0.0	chr1	160032357	160032462	(88923960)	C	MER53	DNA/hAT	(77)	116	1	235133
3335	15.9	0.9	0.6	chr1	160925972	160926495	(88029927)	C	MER57-int	LTR/ERV1	(4281)	1665	1140	236466
386	23.6	10.6	0.0	chr1	161077167	161077276	(87879146)	C	MIRc	SINE/MIR	(35)	233	111	236831
20	0.0	0.0	0.0	chr1	161225920	161225941	(87730481)	+	(T)n	Simple_repeat	1	22	(0)	237108
230	30.1	3.5	0.0	chr1	161390599	161390681	(87565741)	C	L1ME4b	LINE/L1	(74)	818	733	237442
969	12.4	11.4	4.6	chr1	161390693	161390887	(87565535)	C	MER2	DNA/TcMar-Tigger	(0)	345	136	237443
19	12.4	0.0	0.0	chr1	161399246	161399280	(87557142)	+	(GCCGGA)n	Simple_repeat	1	35	(0)	237469
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
14	9.3	0.0	0.0	chr1	161439874	161439896	(87516526)	+	(GGT)n	Simple_repeat	1	23	(0)	237535
621	5.4	0.0	0.0	chr1	161440169	161440242	(87516180)	C	tRNA-Gly-GGA	tRNA	(1)	74	1	237536
18	25.5	2.3	5.6	chr1	161440260	161440347	(87516075)	+	(CCCG)n	Simple_repeat	1	90	(0)	237537
662	1.3	0.0	0.0	chr1	161440822	161440896	(87515526)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237538
645	1.4	0.0	0.0	chr1	161540241	161540314	(87416108)	+	tRNA-Asn-AAC	tRNA	1	74	(3)	237691
183	22.6	8.6	0.0	chr1	162632591	162632643	(86323779)	C	X9_LINE	LINE/L1	(61)	875	818	239513
356	29.7	8.1	5.0	chr1	165711442	165711499	(83244923)	+	MIRb	SINE/MIR	209	268	(0)	244140
796	21.1	0.0	0.0	chr1	165711565	165711692	(83244730)	+	FLAM_A	SINE/Alu	1	128	(14)	244142
452	9.3	0.0	0.0	chr1	165718476	165718529	(83237893)	C	AluYg6	SINE/Alu	(13)	298	245	244155
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
276	21.7	17.0	3.0	chr1	168179549	168179695	(80776727)	C	L2c	LINE/L2	(38)	3349	3196	247956
208	21.7	18.6	1.1	chr1	171262708	171262800	(77693622)	C	L2c	LINE/L2	(0)	3387	3275	252435
185	41.8	1.0	2.8	chr1	171262801	171262906	(77693516)	C	L3b	LINE/CR1	(445)	4787	4684	252434
14	28.5	3.1	1.5	chr1	171841146	171841210	(77115212)	+	(GGTGCT)n	Simple_repeat	1	67	(0)	253434
18	12.1	0.0	5.0	chr1	171841403	171841442	(77114980)	+	G-rich	Low_complexity	1	40	(0)	253435
13365	15.6	2.8	1.3	chr1	171927732	171930863	(77025559)	C	L1PA12	LINE/L1	(4296)	3245	1	253564
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
13	13.2	0.0	0.0	chr1	172533420	172533444	(76422978)	+	(GAA)n	Simple_repeat	1	25	(0)	254354
17079	17.0	1.3	2.5	chr1	173616741	173619545	(75336877)	+	L1PA11	LINE/L1	13	4388	(3753)	255862
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
1765	17.6	0.0	4.6	chr1	178419264	178419587	(70536835)	C	AluJr	SINE/Alu	(2)	310	2	263073
14	9.6	0.0	0.0	chr1	179882205	179882227	(69074195)	+	(TCC)n	Simple_repeat	1	23	(0)	265466
18	7.8	0.0	0.0	chr1	180154924	180154972	(68801450)	+	(GCT)n	Simple_repeat	1	49	(0)	265971
233	25.0	0.0	0.0	chr1	180156049	180156108	(68800314)	C	Kanga11a	DNA/TcMar-Tc2	(910)	60	1	265972
22	0.0	0.0	0.0	chr1	180231555	180231578	(68724844)	+	(CG)n	Simple_repeat	1	24	(0)	266086
1592	20.1	0.0	1.1	chr1	180882971	180883253	(68073169)	C	AluJo	SINE/Alu	(20)	292	13	267116
292	31.2	5.5	9.9	chr1	180883262	180883426	(68072996)	C	MIRc	SINE/MIR	(37)	231	74	267117
21	16.6	2.9	3.8	chr1	181105455	181105526	(67850896)	+	G-rich	Low_complexity	1	71	(0)	267474
6821	18.6	5.3	2.4	chr1	182514753	182516156	(66440266)	C	HUERS-P2-int	LTR/ERV1	(1530)	1558	111	269593
1002	14.9	0.0	3.0	chr1	182516175	182516340	(66440082)	C	LTR1F1	LTR/ERV1	(568)	161	1	269595
5243	23.3	2.7	2.5	chr1	182516345	182518005	(66438417)	C	L1MA4	LINE/L1	(3892)	3673	2009	269586
466	24.1	18.9	3.1	chr1	183324170	183324426	(65631996)	+	MamGypLTR2c	LTR/Gypsy	749	1055	(13)	270929
273	27.9	8.1	1.2	chr1	184852414	184852493	(64103929)	+	L2b	LINE/L2	3248	3333	(42)	273324
343	32.0	9.8	0.0	chr1	184852494	184852649	(64103773)	+	MIR3	SINE/MIR	34	206	(2)	273325
21	22.2	1.3	5.3	chr1	185317244	185317318	(63639104)	+	(GCC)n	Simple_repeat	1	76	(0)	274052
18	9.3	0.0	7.3	chr1	185317384	185317424	(63638998)	+	(GCCCC)n	Simple_repeat	1	41	(0)	274053
527	25.5	3.7	3.7	chr1	193104812	193105002	(55851420)	+	MER53	DNA/hAT	1	191	(2)	284361
21	20.9	2.8	4.0	chr1	193105439	193105510	(55850912)	+	(CCCGC)n	Simple_repeat	1	74	(0)	284362
18	14.7	4.3	2.0	chr1	197201312	197201358	(51755064)	+	(CCCCT)n	Simple_repeat	1	49	(0)	289611
1074	29.8	12.9	0.9	chr1	198375754	198376204	(50580218)	+	LTR78	LTR/ERV1	761	1273	(31)	291119
1183	15.8	0.7	4.0	chr1	199394679	199394955	(49561467)	+	L1MDa	LINE/L1	2327	2594	(4039)	292440
2284	11.2	2.6	0.0	chr1	200328911	200329214	(48627208)	+	AluSx	SINE/Alu	1	312	(0)	294028
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
24	20.0	4.2	5.0	chr1	201539287	201539381	(47417041)	+	(GCGCG)n	Simple_repeat	1	99	(0)	296223
216	22.1	18.1	1.3	chr1	201539623	201539700	(47416722)	+	MIR1_Amn	SINE/MIR	108	201	(29)	296224
1679	12.8	5.3	2.7	chr1	202927401	202927696	(46028726)	+	AluJb	SINE/Alu	1	304	(8)	298768
2271	8.1	0.7	1.3	chr1	202927700	202927997	(46028425)	+	AluSz	SINE/Alu	3	298	(14)	298769
15	18.5	1.8	7.0	chr1	203650633	203650688	(45305734)	+	G-rich	Low_complexity	1	57	(0)	300037
2298	9.7	1.3	0.0	chr1	203830531	203830829	(45125593)	+	AluSc8	SINE/Alu	1	303	(8)	300411
1683	11.3	1.6	0.4	chr1	203830926	203831202	(45125220)	C	AluSp	SINE/Alu	(0)	313	42	300412
683	13.9	13.6	0.9	chr1	205166371	205166485	(43789937)	+	FLAM_C	SINE/Alu	2	133	(10)	302914
2313	10.6	0.0	0.0	chr1	205562636	205562936	(43393486)	+	AluSz	SINE/Alu	2	302	(10)	303688
933	18.4	1.6	5.1	chr1	205562937	205563067	(43393355)	C	MER5A	DNA/hAT-Charlie	(60)	129	1	303687
283	23.9	19.0	0.9	chr1	205563109	205563236	(43393186)	C	MIRb	SINE/MIR	(0)	268	117	303689
270	28.2	0.9	13.4	chr1	205563284	205563375	(43393047)	+	L3	LINE/CR1	3968	4053	(46)	303676
11186	9.6	0.5	3.7	chr1	210048657	210049433	(38906989)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	854	310545
4854	13.5	2.7	1.5	chr1	211415376	211416286	(37540136)	+	L1MA4	LINE/L1	5258	6179	(121)	312654
19	22.4	4.8	0.0	chr1	211578138	211578199	(37378223)	+	(GGCCGT)n	Simple_repeat	1	65	(0)	312973
981	24.1	16.1	0.6	chr1	211742399	211742740	(37213682)	C	Charlie2a	DNA/hAT-Charlie	(2353)	508	104	313298
186	34.9	3.5	1.2	chr1	211742891	211742974	(37213448)	C	MamTip2	DNA/hAT-Tip100	(26)	279	194	313299
342	21.1	2.2	3.2	chr1	212440720	212440812	(36515610)	+	MIR	SINE/MIR	79	170	(92)	314513
271	34.5	0.8	1.6	chr1	212595527	212595647	(36360775)	C	MLT1K	LTR/ERVL-MaLR	(473)	122	3	314824
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
670	34.1	5.7	7.8	chr1	213453201	213453646	(35502776)	C	L2b	LINE/L2	(0)	3375	2940	316264
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
647	23.7	5.9	10.6	chr1	216193515	216193880	(32762542)	+	MLT1C	LTR/ERVL-MaLR	51	389	(1)	320060
724	28.2	1.7	3.2	chr1	216193885	216194131	(32762291)	+	LTR16	LTR/ERVL	207	538	(0)	320061
573	32.4	6.3	2.3	chr1	216194134	216194484	(32761938)	+	HERV16-int	LTR/ERVL	5	370	(4626)	320061
14	27.4	2.9	2.8	chr1	218165228	218165296	(30791126)	+	G-rich	Low_complexity	1	71	(0)	322782
12	19.3	0.0	5.1	chr1	220094064	220094102	(28862320)	+	(CCGCC)n	Simple_repeat	1	39	(0)	325675
1630	19.2	7.1	5.7	chr1	220785616	220786074	(28170348)	+	MER31B	LTR/ERV1	1	466	(0)	326738
336	26.5	2.9	2.2	chr1	221086157	221086291	(27870131)	C	UCON29	DNA/PiggyBac?	(83)	356	221	327139
1739	16.4	1.9	0.0	chr1	221086372	221086676	(27869746)	+	L1PB4	LINE/L1	5838	6148	(8)	327140
14	15.3	0.0	0.0	chr1	221741833	221741861	(27214561)	+	(TCTC)n	Simple_repeat	1	29	(0)	328099
32	10.8	0.0	0.0	chr1	221741862	221741911	(27214511)	+	(CA)n	Simple_repeat	1	50	(0)	328100
14	8.1	3.9	0.0	chr1	221742866	221742891	(27213531)	+	(CGCC)n	Simple_repeat	1	27	(0)	328101
15	18.9	2.3	2.2	chr1	222814877	222814920	(26141502)	+	(CCCTCTG)n	Simple_repeat	1	45	(0)	329730
486	25.0	1.7	0.8	chr1	223134016	223134132	(25822290)	+	MIRb	SINE/MIR	55	172	(96)	330257
655	30.7	7.0	0.4	chr1	223495187	223495428	(25460994)	C	MIRc	SINE/MIR	(8)	260	2	330777
217	33.2	18.4	0.9	chr1	223500170	223500388	(25456034)	C	L2b	LINE/L2	(3)	3372	3107	330790
19	20.6	3.0	4.3	chr1	223712887	223712965	(25243457)	+	(GCGG)n	Simple_repeat	1	77	(0)	331090
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
13	7.5	7.1	0.0	chr1	224183155	224183182	(24773240)	+	(GGCG)n	Simple_repeat	1	30	(0)	331974
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
2456	12.1	0.0	0.3	chr1	224331618	224331930	(24624492)	C	AluSx	SINE/Alu	(0)	312	1	332351
1795	12.9	8.6	3.1	chr1	224331931	224331956	(24624466)	C	L1MB3	LINE/L1	(361)	5822	5802	332350
581	18.6	1.4	0.0	chr1	224331959	224332058	(24624364)	+	MSTD	LTR/ERVL-MaLR	223	368	(89)	332352
281	15.8	5.0	0.0	chr1	224332062	224332118	(24624304)	C	L2a	LINE/L2	(3)	3423	3364	332353
12494	14.8	2.5	0.4	chr1	224481311	224483196	(24473226)	C	L1M1	LINE/L1	(5496)	2069	143	332636
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
319	22.9	0.0	0.0	chr1	225230397	225230466	(23725956)	+	L1ME4a	LINE/L1	5980	6049	(75)	333689
259	29.9	17.8	0.6	chr1	225378918	225379075	(23577347)	+	MIR3	SINE/MIR	11	201	(7)	333893
2623	21.3	1.2	0.6	chr1	225480741	225481255	(23475167)	+	LTR53	LTR/ERVL	1	518	(1)	334039
1097	27.3	15.9	10.7	chr1	225526633	225527142	(23429280)	C	HAL1	LINE/L1	(1419)	1088	518	334099
319	26.4	6.5	4.0	chr1	225527717	225527872	(23428550)	+	L2b	LINE/L2	3011	3167	(220)	334102
417	34.9	10.3	2.1	chr1	225539483	225539821	(23416601)	+	L2	LINE/L2	2711	3080	(339)	334108
12	8.1	3.6	3.5	chr1	225652654	225652681	(23303741)	+	(CCCGC)n	Simple_repeat	1	29	(0)	334306
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
2300	25.6	9.0	10.7	chr1	225805295	225806269	(23150153)	C	HAL1	LINE/L1	(760)	1747	695	334610
348	22.9	12.5	5.4	chr1	225806289	225806399	(23150023)	C	L1MC4	LINE/L1	(21)	8021	7902	334615
1758	14.0	5.5	0.4	chr1	225809562	225809839	(23146583)	+	AluJo	SINE/Alu	2	294	(18)	334624
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
293	21.4	5.6	3.5	chr1	225883213	225883299	(23073123)	+	MIR3	SINE/MIR	94	182	(26)	334735
2431	9.0	0.3	0.3	chr1	226084155	226084466	(22871956)	+	AluSz	SINE/Alu	1	312	(0)	335166
1124	22.8	16.5	4.3	chr1	226109093	226109510	(22846912)	+	L2a	LINE/L2	2948	3426	(0)	335221
2490	5.8	0.3	1.9	chr1	226214230	226214541	(22741881)	C	AluY	SINE/Alu	(4)	307	1	335466
258	30.5	11.5	3.0	chr1	226551161	226551295	(22405127)	+	MIRb	SINE/MIR	117	264	(4)	336103
304	35.5	13.2	2.5	chr1	226551653	226551895	(22404527)	C	L2c	LINE/L2	(0)	3387	3115	336104
1043	16.0	1.3	5.2	chr1	226581346	226581563	(22374859)	C	MSTD	LTR/ERVL-MaLR	(0)	428	197	336151
440	11.4	0.0	0.0	chr1	226581566	226581635	(22374787)	C	Alu	SINE/Alu	(2)	309	240	336152
3028	19.1	5.4	3.2	chr1	226615618	226616300	(22340122)	C	MER61-int	LTR/ERV1	(4517)	700	2	336185
1793	15.2	6.8	0.9	chr1	226616304	226616622	(22339800)	C	MER61A	LTR/ERV1	(2)	339	1	336185
341	34.4	3.1	4.6	chr1	227172359	227172553	(21783869)	+	L1MC4	LINE/L1	11	202	(6013)	337025
511	21.6	0.9	0.0	chr1	227172643	227172753	(21783669)	+	L1MD3	LINE/L1	7868	7979	(16)	337026
346	21.8	11.4	0.7	chr1	227312081	227312228	(21644194)	C	MER112	DNA/hAT-Charlie	(95)	166	1	337274
29	0.0	0.0	0.0	chr1	227332400	227332424	(21623998)	+	(TA)n	Simple_repeat	1	25	(0)	337320
1665	18.5	5.7	0.4	chr1	227332425	227332586	(21623836)	C	AluJb	SINE/Alu	(15)	297	127	337321
28	0.0	0.0	0.0	chr1	227332587	227332613	(21623809)	+	(TTAT)n	Simple_repeat	1	27	(0)	337322
1665	18.5	5.7	0.4	chr1	227332614	227332731	(21623691)	C	AluJb	SINE/Alu	(187)	125	1	337321
2303	29.9	9.4	1.7	chr1	228055561	228056991	(20899431)	+	HAL1	LINE/L1	104	1725	(740)	338250
13	27.9	2.9	2.9	chr1	228102203	228102270	(20854152)	+	(CCCGC)n	Simple_repeat	1	70	(0)	338291
20	21.8	5.4	4.1	chr1	228102774	228102876	(20853546)	+	(CCCGC)n	Simple_repeat	1	104	(0)	338292
20	16.4	0.0	0.0	chr1	228103264	228103304	(20853118)	+	(GCAACCC)n	Simple_repeat	1	41	(0)	338293
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
640	17.8	2.3	15.9	chr1	228832471	228832629	(20123793)	+	MER96B	DNA/hAT-Tip100	1	133	(284)	339259
1848	16.8	0.0	1.0	chr1	228832630	228832921	(20123501)	+	AluJb	SINE/Alu	2	290	(22)	339260
28	0.0	12.5	0.0	chr1	229342108	229342155	(19614267)	+	(CCGCGTCCT)n	Simple_repeat	1	54	(0)	340085
13	12.2	2.4	7.1	chr1	229342214	229342254	(19614168)	+	G-rich	Low_complexity	1	42	(0)	340086
13	17.8	0.0	2.9	chr1	229342542	229342575	(19613847)	+	(CCGCC)n	Simple_repeat	1	34	(0)	340087
13	22.4	1.7	6.7	chr1	231421470	231421528	(17534894)	+	(GCC)n	Simple_repeat	1	60	(0)	343470
24	18.8	1.6	3.1	chr1	231421889	231421952	(17534470)	+	(GGC)n	Simple_repeat	1	65	(0)	343471
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
1047	26.9	1.3	4.6	chr1	232299134	232299523	(16656899)	+	L1M5	LINE/L1	2247	2623	(3523)	344783
669	16.9	7.5	4.2	chr1	232299991	232300157	(16656265)	C	MIR	SINE/MIR	(0)	262	90	344784
904	21.9	3.6	6.1	chr1	233483358	233483702	(15472720)	C	L1M6B	LINE/L1	(1415)	1092	757	346473
21	17.3	0.0	2.4	chr1	233613655	233613696	(15342726)	+	(CA)n	Simple_repeat	1	42	(0)	346666
28	18.4	2.9	1.4	chr1	233614033	233614102	(15342320)	+	G-rich	Low_complexity	1	72	(0)	346667
4613	20.8	6.4	3.0	chr1	234150651	234151911	(14804511)	+	HAL1M8	LINE/L1	2	1308	(1683)	347437
13	18.8	0.0	0.0	chr1	234478558	234478588	(14477834)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	347927
2086	22.4	10.4	7.9	chr1	234556844	234557131	(14399291)	C	MER21C	LTR/ERVL	(225)	713	421	348082
1879	18.1	0.3	0.7	chr1	234557132	234557440	(14398982)	C	AluJb	SINE/Alu	(3)	309	2	348084
2086	22.4	10.4	7.9	chr1	234557441	234557706	(14398716)	C	MER21C	LTR/ERVL	(518)	420	125	348082
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
13	22.1	5.6	1.8	chr1	235327257	235327310	(13629112)	+	(GCCCGGC)n	Simple_repeat	1	57	(0)	349500
2426	8.1	0.0	0.7	chr1	235505383	235505689	(13450733)	C	AluSx1	SINE/Alu	(7)	305	1	349878
1270	29.4	8.6	8.8	chr1	235724278	235724361	(13232061)	+	L1MEd	LINE/L1	7	104	(6982)	350298
2420	13.4	6.2	1.9	chr1	235724362	235724825	(13231597)	C	L1MC2	LINE/L1	(4)	6340	5856	350299
1270	29.4	8.6	8.8	chr1	235724826	235725151	(13231271)	+	L1MEd	LINE/L1	105	400	(6686)	350298
15	4.8	0.0	0.0	chr1	236065014	236065035	(12891387)	+	(CAG)n	Simple_repeat	1	22	(0)	350913
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
229	12.9	0.0	0.0	chr1	236535799	236535829	(12420593)	+	L1PA15-16	LINE/L1	1396	1426	(5427)	351846
290	28.6	10.1	0.8	chr1	236535921	236536124	(12420298)	C	L2c	LINE/L2	(1)	3386	3133	351847
1431	14.8	0.5	0.0	chr1	236697138	236697333	(12259089)	+	AluJb	SINE/Alu	94	290	(22)	352121
14	27.7	1.6	3.1	chr1	237042597	237042660	(11913762)	+	G-rich	Low_complexity	1	65	(0)	352680
13	22.5	0.0	7.4	chr1	237042888	237042941	(11913481)	+	(GGCC)n	Simple_repeat	1	54	(0)	352681
3201	18.6	11.7	1.5	chr1	238408880	238409614	(10546808)	+	LTR8B	LTR/ERV1	1	820	(0)	354660
23	12.3	2.2	2.1	chr1	239386589	239386634	(9569788)	+	GA-rich	Low_complexity	1	47	(0)	356035
17	26.6	4.7	4.5	chr1	239386846	239386952	(9569470)	+	(GGCCGC)n	Simple_repeat	1	112	(0)	356036
1389	21.8	12.5	4.5	chr1	239564836	239565297	(9391125)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	356328
188	6.7	0.0	0.0	chr1	240091461	240091490	(8864932)	C	L2a	LINE/L2	(0)	3426	3397	357134
14	14.6	0.0	3.1	chr1	240091763	240091794	(8864628)	+	(GCG)n	Simple_repeat	1	32	(0)	357135
17	21.6	2.1	0.0	chr1	240091879	240091926	(8864496)	+	(AGCCGC)n	Simple_repeat	1	49	(0)	357136
15	16.7	2.9	0.0	chr1	240092260	240092293	(8864129)	+	(GGC)n	Simple_repeat	1	35	(0)	357137
33	12.3	0.0	0.0	chr1	240092724	240092785	(8863637)	+	(GCA)n	Simple_repeat	1	62	(0)	357138
2137	13.1	0.0	0.0	chr1	240128876	240129173	(8827249)	C	AluSx	SINE/Alu	(14)	298	1	357199
1826	13.4	4.8	1.8	chr1	240493542	240493824	(8462598)	C	AluJr	SINE/Alu	(15)	297	6	357711
21	12.2	2.8	0.0	chr1	240611917	240611957	(8344465)	+	(TC)n	Simple_repeat	1	42	(0)	357925
23	22.7	1.6	0.0	chr1	241356738	241356799	(7599623)	+	(GCGCCCG)n	Simple_repeat	1	63	(0)	359175
1541	26.1	6.2	1.0	chr1	241423267	241423789	(7532633)	C	L1MB8	LINE/L1	(7)	6171	5620	359282
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
1055	18.3	2.6	3.8	chr1	241424635	241424984	(7531438)	+	MER52D	LTR/ERV1	470	884	(1239)	359283
30	24.1	0.9	4.7	chr1	241639705	241639834	(7316588)	+	(GGCGG)n	Simple_repeat	1	125	(0)	359585
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
1215	19.2	4.4	4.1	chr1	241688117	241688436	(7267986)	+	L1MB8	LINE/L1	5832	6152	(26)	359663
3733	17.4	4.1	1.1	chr1	241688512	241689611	(7266811)	+	L1MCa	LINE/L1	11	872	(5636)	359664
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
14036	15.1	2.6	1.4	chr10	1864978	1865923	(131931499)	+	Tigger1	DNA/TcMar-Tigger	1479	2418	(0)	373020
1783	21.2	1.7	0.0	chr10	1865928	1866266	(131931156)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	373022
335	29.5	14.0	2.1	chr10	6303858	6304051	(127493371)	+	MLT1J2	LTR/ERVL-MaLR	111	331	(117)	379283
279	28.5	1.2	1.3	chr10	7377956	7378845	(126418577)	+	(TGTG)n	Simple_repeat	1	901	(0)	380922
359	27.8	8.8	10.4	chr10	7378911	7379131	(126418291)	+	MIR	SINE/MIR	18	234	(28)	380923
12	32.0	0.0	0.0	chr10	8049722	8049771	(125747651)	+	(GGCGGA)n	Simple_repeat	1	50	(0)	382054
15	20.9	0.0	7.0	chr10	11611162	11611218	(122186204)	+	(CCGCCCC)n	Simple_repeat	1	57	(0)	387152
19	0.0	9.7	0.0	chr10	11611514	11611544	(122185878)	+	(CGG)n	Simple_repeat	1	34	(0)	387153
316	19.6	15.9	6.3	chr10	13536504	13536661	(120260761)	C	LTR41C	LTR/ERVL	(51)	650	475	390953
259	18.8	8.6	0.0	chr10	13536970	13537033	(120260389)	C	LTR41C	LTR/ERVL	(629)	72	3	390953
294	23.9	8.0	0.0	chr10	13537046	13537137	(120260285)	+	MIR	SINE/MIR	114	213	(49)	390952
24	6.9	0.0	0.0	chr10	13707258	13707288	(120090134)	+	(AC)n	Simple_repeat	1	31	(0)	391219
1908	11.4	4.2	0.0	chr10	13866699	13866969	(119930453)	+	AluSx1	SINE/Alu	22	304	(8)	391514
1036	27.8	9.7	4.7	chr10	14445264	14446165	(119351257)	+	L1ME3E	LINE/L1	4888	5842	(400)	392464
1728	17.1	3.1	0.7	chr10	15378262	15378548	(118418874)	C	AluJr	SINE/Alu	(16)	296	3	394152
13	12.1	0.0	3.5	chr10	15719926	15719954	(118077468)	+	(CCCG)n	Simple_repeat	1	29	(0)	394703
12	22.1	0.0	0.0	chr10	17229093	17229124	(116568298)	+	(GGCCCA)n	Simple_repeat	1	32	(0)	397005
2552	19.4	1.2	1.8	chr10	18244711	18245214	(115552208)	+	MLT1D	LTR/ERVL-MaLR	5	505	(0)	398754
244	22.9	9.0	1.6	chr10	20598880	20598941	(113198481)	C	MamTip3	DNA/hAT-Tip100	(8)	492	426	402262
430	25.9	2.8	4.8	chr10	20598964	20599109	(113198313)	C	MamTip3	DNA/hAT-Tip100	(164)	336	194	402262
2023	14.2	0.3	3.5	chr10	21330184	21330500	(112466922)	+	AluJr	SINE/Alu	2	308	(4)	403427
713	16.4	3.8	0.8	chr10	23360580	23360707	(110436715)	C	AluJo	SINE/Alu	(180)	132	1	406694
2802	19.0	3.6	0.7	chr10	23360877	23361421	(110436001)	+	MER68	LTR/ERVL	3	563	(0)	406695
13	14.0	4.7	4.4	chr10	24724937	24724979	(109072443)	+	(TCACCC)n	Simple_repeat	1	45	(0)	408957
954	8.8	0.9	0.0	chr10	26566774	26566938	(107230484)	+	AluJb	SINE/Alu	169	312	(0)	411918
13	28.1	5.0	0.0	chr10	27240853	27240912	(106556510)	+	(CGC)n	Simple_repeat	1	63	(0)	413144
320	23.4	6.9	4.7	chr10	27241226	27241310	(106556112)	+	MIRb	SINE/MIR	34	120	(148)	413145
16	25.3	3.6	0.0	chr10	28533754	28533809	(105263613)	+	(GCGG)n	Simple_repeat	1	58	(0)	415309
538	20.3	4.4	5.6	chr10	29737330	29737491	(104059931)	C	MER5A	DNA/hAT-Charlie	(0)	189	30	417358
2602	5.3	0.0	0.3	chr10	30393116	30393418	(103404004)	+	AluSg7	SINE/Alu	1	302	(7)	418611
2148	13.6	0.3	0.3	chr10	30418343	30418652	(103378770)	+	AluSx	SINE/Alu	2	311	(1)	418673
213	34.2	2.6	5.9	chr10	30419118	30419235	(103378187)	C	MIRb	SINE/MIR	(132)	136	23	418674
246	17.2	18.3	0.0	chr10	35218265	35218322	(98579100)	C	MER5A	DNA/hAT-Charlie	(68)	121	51	426197
1071	15.0	0.0	1.8	chr10	35218330	35218496	(98578926)	C	AluJb	SINE/Alu	(13)	299	136	426198
236	39.1	0.0	1.1	chr10	35260543	35260630	(98536792)	+	MER5B	DNA/hAT-Charlie	6	92	(86)	426290
225	28.6	0.0	0.0	chr10	37857479	37857541	(95939881)	C	MIR	SINE/MIR	(81)	181	119	430156
21	12.1	0.0	0.0	chr10	43077275	43077323	(90720099)	+	(GCT)n	Simple_repeat	1	49	(0)	432927
20	17.5	1.5	6.1	chr10	43077517	43077581	(90719841)	+	G-rich	Low_complexity	1	66	(0)	432928
1090	9.3	1.9	2.5	chr10	43420119	43420280	(90377142)	C	AluJb	SINE/Alu	(8)	304	144	433466
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
1132	24.4	9.2	6.6	chr10	44462432	44462701	(89334721)	+	MLT1C	LTR/ERVL-MaLR	1	256	(211)	434861
39	7.7	0.0	0.0	chr10	44462702	44462756	(89334666)	+	(GCCAGGGAAT)n	Simple_repeat	1	55	(0)	434862
1132	24.4	9.2	6.6	chr10	44462757	44462937	(89334485)	+	MLT1C	LTR/ERVL-MaLR	257	464	(3)	434861
221	36.8	0.4	8.9	chr10	44462938	44463101	(89334321)	+	L2a	LINE/L2	2745	2892	(527)	434860
24	20.4	3.5	4.5	chr10	45001106	45001191	(88796231)	+	G-rich	Low_complexity	1	89	(0)	435515
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
224	18.5	2.0	0.8	chr10	45673228	45673289	(88124133)	+	MIRb	SINE/MIR	103	163	(105)	436410
12	21.5	6.0	1.9	chr10	45727311	45727360	(88070062)	+	(GGCTG)n	Simple_repeat	1	53	(0)	436502
12	20.4	0.0	0.0	chr10	46030399	46030427	(87766995)	+	GA-rich	Low_complexity	1	29	(0)	437045
265	6.2	0.0	0.0	chr10	46030916	46030947	(87766475)	+	L1MB7	LINE/L1	5888	5919	(265)	437046
2275	8.4	1.3	0.3	chr10	46030986	46031283	(87766139)	+	AluSc8	SINE/Alu	1	301	(10)	437047
661	25.6	3.4	7.5	chr10	47398107	47398414	(86399008)	C	HAL1	LINE/L1	(37)	2470	2176	439127
381	25.9	2.6	0.0	chr10	47398421	47398532	(86398890)	C	HAL1	LINE/L1	(1608)	899	785	439127
1453	25.3	10.9	2.0	chr10	48468207	48468665	(85328757)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	440580
1089	21.1	10.1	6.7	chr10	48468666	48468791	(85328631)	+	MER96B	DNA/hAT-Tip100	281	417	(0)	440579
749	28.3	8.1	0.0	chr10	50027808	50028012	(83769410)	+	MER58A	DNA/hAT-Charlie	2	224	(0)	442735
499	26.4	7.8	5.2	chr10	50028013	50028058	(83769364)	C	Kanga1	DNA/TcMar-Tc2	(350)	1395	1355	442734
1497	21.7	2.4	0.3	chr10	50028072	50028240	(83769182)	C	AluJr	SINE/Alu	(16)	296	126	442736
622	20.3	4.5	0.7	chr10	50625457	50625605	(83171817)	+	MER5A	DNA/hAT-Charlie	16	170	(19)	443661
11	12.0	4.8	6.8	chr10	55631532	55631573	(78165849)	+	(GCTCCT)n	Simple_repeat	1	44	(0)	450427
221	35.1	0.0	0.0	chr10	59307442	59307518	(74489904)	C	MIRb	SINE/MIR	(50)	218	142	455371
1749	21.2	6.3	2.9	chr10	59873164	59873610	(73923812)	+	MLT1C	LTR/ERVL-MaLR	3	465	(2)	456223
358	26.3	2.9	4.8	chr10	59881753	59881856	(73915566)	C	L4_A_Mam	LINE/RTE-X	(310)	4680	4579	456237
26	0.0	0.0	0.0	chr10	60141562	60141586	(73655836)	+	(T)n	Simple_repeat	1	25	(0)	456642
873	26.3	23.4	0.8	chr10	62071911	62072512	(71724910)	C	LTR50	LTR/ERVL	(0)	795	17	459498
15	25.2	4.8	1.5	chr10	63133249	63133311	(70664111)	+	(GGC)n	Simple_repeat	1	66	(0)	461239
982	12.4	0.0	0.0	chr10	63563305	63563441	(70233981)	+	L1MC3	LINE/L1	6668	6804	(981)	462006
674	15.3	0.0	0.0	chr10	63563442	63563539	(70233883)	C	MER44B	DNA/TcMar-Tigger	(0)	550	453	462007
457	17.3	0.0	6.9	chr10	63563542	63563628	(70233794)	C	MER44B	DNA/TcMar-Tigger	(287)	263	183	462007
2700	18.1	8.6	0.5	chr10	63563637	63564214	(70233208)	+	L1MC3	LINE/L1	7118	7746	(39)	462006
1110	34.5	8.9	3.1	chr10	67821701	67822633	(65974789)	C	L2b	LINE/L2	(670)	2749	1758	467959
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
664	27.3	13.8	4.8	chr10	68097115	68097383	(65700039)	+	LFSINE_Vert	SINE/tRNA	14	310	(149)	468508
796	18.6	11.3	1.1	chr10	68097519	68097692	(65699730)	C	MIR	SINE/MIR	(11)	251	58	468509
891	16.7	0.0	0.7	chr10	68403794	68403937	(65393485)	C	AluJr	SINE/Alu	(14)	298	156	469126
259	10.8	0.0	2.7	chr10	68403941	68403977	(65393445)	C	AluYm1	SINE/Alu	(275)	36	1	469127
16	18.9	0.0	0.0	chr10	68527338	68527373	(65270049)	+	(GCCGCC)n	Simple_repeat	1	36	(0)	469455
13	18.9	2.8	0.0	chr10	68561552	68561587	(65235835)	+	G-rich	Low_complexity	1	37	(0)	469548
19	20.8	0.0	6.3	chr10	68561671	68561733	(65235689)	+	(CTCC)n	Simple_repeat	1	63	(0)	469549
14	13.7	0.0	5.6	chr10	68992799	68992834	(64804588)	+	(TTTTG)n	Simple_repeat	1	36	(0)	470597
28	4.5	4.0	3.9	chr10	69801822	69801871	(63995551)	+	(GGA)n	Simple_repeat	1	52	(0)	472288
224	34.0	12.6	0.9	chr10	70169947	70170157	(63627265)	+	MIRc	SINE/MIR	26	264	(4)	472878
364	31.8	0.9	0.0	chr10	71043186	71043295	(62754127)	C	MIR3	SINE/MIR	(40)	168	58	474548
595	27.1	11.0	2.8	chr10	71264989	71265204	(62532218)	+	MIRb	SINE/MIR	25	260	(8)	474900
260	26.1	7.3	0.9	chr10	71305045	71305160	(62492262)	C	L1ME4b	LINE/L1	(77)	815	692	474965
230	24.3	2.6	1.3	chr10	71305172	71305246	(62492176)	C	LTR78B	LTR/ERV1	(2)	1294	1219	474966
209	35.9	1.5	0.0	chr10	71579407	71579470	(62217952)	+	L2c	LINE/L2	3311	3375	(0)	475527
361	27.7	3.5	2.1	chr10	71579484	71579623	(62217799)	C	MER5A	DNA/hAT-Charlie	(1)	188	47	475531
1206	21.9	3.4	11.5	chr10	72103679	72104096	(61693326)	+	MER39	LTR/ERV1	325	707	(0)	476537
249	24.3	9.5	2.7	chr10	72298708	72298821	(61498601)	C	MIRc	SINE/MIR	(49)	219	93	476991
802	21.9	6.7	5.1	chr10	73810659	73810894	(59986528)	C	MIR	SINE/MIR	(18)	244	5	479969
18	15.2	9.0	5.2	chr10	73811036	73811124	(59986298)	+	G-rich	Low_complexity	1	97	(0)	479970
2291	8.9	1.0	0.0	chr10	73906248	73906540	(59890882)	C	AluSz	SINE/Alu	(15)	297	2	480140
4931	5.2	0.7	0.0	chr10	74457412	74458023	(59339399)	+	L1PA7	LINE/L1	5535	6150	(4)	481216
28	0.0	0.0	0.0	chr10	74458120	74458146	(59339276)	+	(T)n	Simple_repeat	1	27	(0)	481217
1380	21.4	1.1	3.5	chr10	74458150	74458438	(59338984)	C	AluJb	SINE/Alu	(30)	282	1	481218
13	13.2	0.0	0.0	chr10	75403419	75403443	(58393979)	+	(GAGG)n	Simple_repeat	1	25	(0)	483057
17	16.1	0.0	0.0	chr10	75509265	75509293	(58288129)	+	(TG)n	Simple_repeat	1	29	(0)	483211
12	15.6	7.3	5.1	chr10	84328520	84328574	(49468848)	+	(GCTGCGC)n	Simple_repeat	1	59	(0)	496706
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
227	28.2	1.3	2.5	chr10	87504364	87504443	(46292979)	C	MER5A	DNA/hAT-Charlie	(108)	81	3	501378
180	36.2	4.1	3.1	chr10	87505755	87505851	(46291571)	C	L2b	LINE/L2	(0)	3375	3278	501379
17	16.1	0.0	0.0	chr10	87506007	87506035	(46291387)	+	(T)n	Simple_repeat	1	29	(0)	501380
214	36.9	5.5	1.0	chr10	88258625	88258728	(45538694)	C	MIR1_Amn	SINE/MIR	(72)	158	50	502593
1067	26.2	14.3	5.5	chr10	89700368	89701065	(44096357)	C	L1MC4	LINE/L1	(32)	8010	7203	504844
22	21.6	3.1	6.1	chr10	91163256	91163351	(42634071)	+	G-rich	Low_complexity	1	99	(0)	506909
27	16.1	4.1	2.6	chr10	91410234	91410306	(42387116)	+	G-rich	Low_complexity	1	76	(0)	507281
18	25.9	1.3	5.2	chr10	91410354	91410429	(42386993)	+	(CGC)n	Simple_repeat	1	77	(0)	507282
231	21.9	0.0	8.8	chr10	93894807	93894886	(39902536)	C	MIR3	SINE/MIR	(32)	176	104	511991
22	29.4	1.3	0.0	chr10	94402731	94402759	(39394663)	+	(GGCGGA)n	Simple_repeat	1	73	(0)	512920
23	15.7	0.0	0.0	chr10	94402760	94402802	(39394620)	+	GA-rich	Low_complexity	1	43	(0)	512921
2141	16.4	0.0	0.0	chr10	94673327	94673638	(39123784)	C	AluJb	SINE/Alu	(0)	312	1	513420
259	20.0	0.0	0.0	chr10	94673640	94673684	(39123738)	+	HERVL74-int	LTR/ERVL	4029	4073	(1612)	513419
2279	22.1	2.1	10.2	chr10	94673676	94674087	(39123335)	+	HERVL74-int	LTR/ERVL	4589	4942	(743)	513419
1767	18.1	10.6	1.1	chr10	95182914	95183369	(38614053)	+	MER101-int	LTR/ERV1	3937	4381	(2258)	513853
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
40	0.0	2.4	2.3	chr10	96229655	96229696	(37567726)	+	(TG)n	Simple_repeat	1	43	(0)	515592
318	20.2	19.3	3.7	chr10	96229886	96230054	(37567368)	+	MIR3	SINE/MIR	6	192	(16)	515593
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
2444	5.4	0.0	0.0	chr10	96845450	96845766	(36951656)	C	AluYe5	SINE/Alu	(0)	310	1	516830
12414	7.9	0.6	0.0	chr10	99950361	99951922	(33845500)	+	THE1B-int	LTR/ERVL-MaLR	3	1573	(7)	522381
18	25.1	5.7	2.1	chr10	100009743	100009758	(33787664)	+	(CTCCGG)n	Simple_repeat	1	39	(54)	522511
19	13.9	1.9	5.6	chr10	100009759	100009811	(33787611)	+	(CCCCCG)n	Simple_repeat	1	54	(0)	522512
18	25.1	5.7	2.1	chr10	100009812	100009830	(33787592)	+	(CTCCGG)n	Simple_repeat	40	93	(0)	522511
12	21.2	2.1	4.2	chr10	100009959	100010005	(33787417)	+	(CCGCCT)n	Simple_repeat	1	48	(0)	522513
266	15.1	0.0	7.0	chr10	100010421	100010477	(33786945)	+	UCON72	Unknown	64	116	(73)	522514
202	31.8	2.9	0.0	chr10	100045973	100046038	(33751384)	+	MIR3	SINE/MIR	127	194	(14)	522605
233	20.4	2.0	0.0	chr10	100046256	100046304	(33751118)	+	MER39B	LTR/ERV1	224	273	(380)	522606
1295	15.5	4.8	12.0	chr10	100046329	100046490	(33750932)	+	AluJo	SINE/Alu	5	136	(176)	522607
2095	12.7	1.0	0.0	chr10	100448631	100448929	(33348493)	+	AluJr	SINE/Alu	1	302	(10)	523396
1887	20.1	1.1	14.4	chr10	100448930	100449280	(33348142)	+	MLT1C	LTR/ERVL-MaLR	183	467	(0)	523395
11	24.1	0.0	0.0	chr10	101067891	101067924	(32729498)	+	G-rich	Low_complexity	1	34	(0)	524413
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
193	22.0	5.7	3.9	chr10	101484885	101484936	(32312486)	C	MIRc	SINE/MIR	(156)	112	60	525185
12	14.3	3.0	2.9	chr10	101485294	101485326	(32312096)	+	A-rich	Low_complexity	1	34	(0)	525186
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
19	4.0	0.0	0.0	chr10	101694598	101694623	(32102799)	+	(CCT)n	Simple_repeat	1	26	(0)	525477
16	15.8	0.0	2.7	chr10	101840054	101840090	(31957332)	+	G-rich	Low_complexity	1	37	(0)	525772
1960	13.1	1.3	3.8	chr10	102449642	102449961	(31347461)	C	AluJb	SINE/Alu	(0)	312	1	526948
12	7.7	3.2	6.2	chr10	102450116	102450146	(31347276)	+	GA-rich	Low_complexity	1	32	(0)	526949
333	29.0	12.1	0.0	chr10	102853740	102853870	(30943552)	C	MIR	SINE/MIR	(78)	184	36	527718
796	16.4	0.0	1.5	chr10	102853897	102854030	(30943392)	C	FLAM_C	SINE/Alu	(11)	132	1	527719
591	26.9	4.9	2.9	chr10	103898661	103898839	(29898583)	C	MIR	SINE/MIR	(79)	183	3	529865
2613	3.3	2.9	0.3	chr10	103966137	103966438	(29830984)	+	AluY	SINE/Alu	1	310	(1)	529994
470	19.6	12.8	2.0	chr10	103966531	103966676	(29830746)	C	MIRb	SINE/MIR	(19)	249	86	529995
12	26.1	0.0	4.1	chr10	103966960	103967008	(29830414)	+	(CACCCCG)n	Simple_repeat	1	49	(0)	529996
280	32.6	3.1	3.1	chr10	109482768	109482960	(24314462)	+	LTR101_Mam	LTR/ERVL	8	200	(629)	538039
360	27.7	8.6	7.6	chr10	109483028	109483316	(24314106)	+	LTR101_Mam	LTR/ERVL	299	590	(239)	538039
2515	7.2	0.3	0.0	chr10	110177019	110177325	(23620097)	C	AluSp	SINE/Alu	(5)	308	1	539047
12	7.2	2.9	8.3	chr10	110304755	110304789	(23492633)	+	G-rich	Low_complexity	1	36	(0)	539232
16	8.7	0.0	0.0	chr10	110304800	110304841	(23492581)	+	(GCA)n	Simple_repeat	1	42	(0)	539233
557	15.8	15.5	0.8	chr10	110305131	110305251	(23492171)	+	MER5A	DNA/hAT-Charlie	48	189	(0)	539234
42	0.0	0.0	0.0	chr10	114095375	114095410	(19702012)	+	(GT)n	Simple_repeat	1	36	(0)	545386
673	28.1	7.6	2.3	chr10	114095556	114095854	(19701568)	+	MLT1N2	LTR/ERVL-MaLR	246	561	(1)	545387
2605	26.3	13.9	6.7	chr10	114223617	114225540	(19571882)	C	HAL1	LINE/L1	(305)	2202	118	545579
432	23.6	1.9	0.0	chr10	114365379	114365484	(19431938)	C	Charlie29a	DNA/hAT-Charlie	(564)	155	48	545820
759	17.4	0.8	4.3	chr10	114472253	114472390	(19325032)	C	AluJr	SINE/Alu	(179)	133	1	545990
617	27.4	2.3	8.8	chr10	114472391	114472515	(19324907)	C	MIR	SINE/MIR	(144)	118	1	545989
15	21.8	0.0	0.0	chr10	114821988	114822024	(18975398)	+	(GCG)n	Simple_repeat	1	37	(0)	546602
2269	10.0	0.3	0.0	chr10	116846369	116846647	(16950775)	C	AluSc8	SINE/Alu	(31)	280	1	549474
448	27.4	3.5	0.6	chr10	116846660	116846844	(16950578)	C	L1ME4a	LINE/L1	(4)	6120	5961	549476
13	23.4	5.8	2.4	chr10	117137134	117137195	(16660227)	+	G-rich	Low_complexity	1	64	(0)	549930
16	24.1	1.8	3.5	chr10	119029967	119030023	(14767399)	+	(GCG)n	Simple_repeat	1	58	(0)	553071
16	23.3	0.0	0.0	chr10	119030023	119030062	(14767360)	+	(CTC)n	Simple_repeat	1	40	(0)	553072
21	12.1	0.0	0.0	chr10	119030110	119030145	(14767277)	+	(CGA)n	Simple_repeat	1	36	(0)	553073
15	7.0	6.7	0.0	chr10	119030612	119030641	(14766781)	+	(CCGC)n	Simple_repeat	1	32	(0)	553074
15	3.3	5.4	7.7	chr10	119030642	119030647	(14766775)	+	(GCC)n	Simple_repeat	2	39	(0)	553075
1033	15.0	4.8	0.0	chr10	119317892	119318071	(14479351)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	553682
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
26	20.4	2.6	2.5	chr10	119872895	119872905	(13924517)	+	(GCGCG)n	Simple_repeat	1	78	(0)	554724
19	15.8	9.2	1.4	chr10	119872906	119872970	(13924452)	+	(GGC)n	Simple_repeat	1	71	(0)	554725
1730	16.2	0.3	10.1	chr10	120294071	120294397	(13503025)	C	AluJb	SINE/Alu	(15)	297	3	555408
15	4.1	4.0	0.0	chr10	120979824	120979848	(12817574)	+	(CCCGC)n	Simple_repeat	1	26	(0)	556460
481	30.3	3.9	4.8	chr10	121032711	121032951	(12764471)	C	MLT1K	LTR/ERVL-MaLR	(343)	267	48	556530
560	25.0	3.8	1.1	chr10	121613341	121613518	(12183904)	C	MLT1C	LTR/ERVL-MaLR	(28)	439	257	557407
667	18.6	9.7	1.1	chr10	121613704	121613882	(12183540)	C	MLT1C	LTR/ERVL-MaLR	(186)	281	86	557407
405	21.4	7.6	2.7	chr10	121974358	121974506	(11822916)	C	MER5A	DNA/hAT-Charlie	(1)	188	32	558053
556	35.3	0.0	0.5	chr10	122766067	122766285	(11031137)	+	MIRb	SINE/MIR	37	254	(14)	559310
2324	12.4	1.3	0.8	chr10	124314713	124315085	(9482337)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	561686
2385	6.7	0.0	0.0	chr10	124801228	124801537	(8995885)	C	AluSp	SINE/Alu	(0)	313	2	562494
16	15.3	0.0	5.0	chr10	125161208	125161247	(8636175)	+	(GCGG)n	Simple_repeat	1	40	(0)	563054
2148	15.5	0.0	1.9	chr10	125400002	125400349	(8397073)	C	AluSx	SINE/Alu	(0)	312	1	563456
180	24.1	4.4	6.5	chr10	125718957	125719049	(8078373)	+	MER5A	DNA/hAT-Charlie	34	124	(65)	563920
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
943	12.9	0.0	0.0	chr10	130116694	130116825	(3680597)	+	FLAM_C	SINE/Alu	2	133	(10)	569127
1675	15.6	1.1	2.5	chr10	130116837	130117118	(3680304)	+	AluJr	SINE/Alu	1	278	(34)	569128
43	0.0	0.0	0.0	chr10	130117121	130117159	(3680263)	+	(ATAA)n	Simple_repeat	1	39	(0)	569129
6583	8.7	17.1	2.5	chr10	130117324	130118400	(3679022)	C	MER11A	LTR/ERVK	(0)	1266	1	569130
210	17.6	7.3	0.0	chr10	133319104	133319154	(478268)	+	MIR3	SINE/MIR	116	170	(38)	572373
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
369	31.5	3.8	0.0	chr11	331129	331255	(134755367)	+	MLT1I-int	LTR/ERVL-MaLR	293	424	(963)	573259
1878	13.5	0.0	1.8	chr11	331610	331891	(134754731)	+	AluJb	SINE/Alu	2	278	(34)	573260
1460	21.1	3.2	1.1	chr11	483442	483806	(134602816)	C	L1M4	LINE/L1	(2122)	4024	3652	573446
1351	27.8	8.3	2.5	chr11	483864	484431	(134602191)	C	L1MC3	LINE/L1	(493)	7292	6689	573445
183	21.6	6.3	0.0	chr11	843408	843481	(134243141)	C	L2b	LINE/L2	(190)	3185	3107	574015
2543	6.6	1.9	0.0	chr11	912563	912867	(134173755)	+	AluY	SINE/Alu	1	311	(0)	574082
402	13.4	7.6	1.2	chr11	2187174	2188103	(132898519)	+	(CA)n	Simple_repeat	1	1001	(0)	575513
822	16.2	2.9	1.8	chr11	3647672	3647841	(131438781)	+	L1MA10	LINE/L1	6163	6334	(0)	577388
2464	6.4	20.1	0.0	chr11	3647949	3648306	(131438316)	+	LTR7	LTR/ERV1	1	448	(2)	577389
13	12.1	7.7	2.4	chr11	3855142	3855180	(131231442)	+	(GGAGCTG)n	Simple_repeat	1	42	(0)	577859
219	34.5	8.4	0.0	chr11	6235510	6235596	(128851026)	C	L2c	LINE/L2	(197)	3190	3096	580993
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
1118	29.1	14.4	4.2	chr11	6604474	6605505	(128481117)	C	L2c	LINE/L2	(209)	3178	2021	581572
490	32.3	6.0	5.0	chr11	6925722	6926119	(128160503)	+	L2	LINE/L2	2062	2463	(956)	581993
2616	16.7	2.6	2.6	chr11	7689391	7689857	(127396765)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	582960
16	14.6	2.5	2.4	chr11	8263184	8263244	(126823378)	+	(CCCCCG)n	Simple_repeat	1	61	(0)	583743
1642	16.4	3.5	0.0	chr11	8821319	8821592	(126265030)	+	AluJo	SINE/Alu	13	296	(16)	584571
33	5.2	0.0	0.0	chr11	8964364	8964403	(126122219)	+	(GGCTCA)n	Simple_repeat	1	40	(0)	584803
23	14.0	2.1	0.0	chr11	10858202	10858248	(124228374)	+	(AGCCGC)n	Simple_repeat	1	48	(0)	588254
269	28.5	7.5	6.1	chr11	10858288	10858418	(124228204)	C	MER5A	DNA/hAT-Charlie	(0)	189	57	588255
27	13.7	3.7	6.0	chr11	12674441	12674521	(122412101)	+	(CGCCG)n	Simple_repeat	1	84	(0)	591160
15	17.7	6.7	0.0	chr11	12674718	12674770	(122411852)	+	G-rich	Low_complexity	1	56	(0)	591161
14	28.0	3.3	0.0	chr11	12674842	12674901	(122411721)	+	G-rich	Low_complexity	1	62	(0)	591162
502	32.1	4.4	10.1	chr11	12764681	12765016	(122321606)	C	MER102b	DNA/hAT-Charlie	(22)	319	4	591293
12	22.1	6.4	0.0	chr11	17207842	17207888	(117878734)	+	(CCTCAG)n	Simple_repeat	1	50	(0)	598286
12	21.7	0.0	0.0	chr11	20023271	20023302	(115063320)	+	(GGAGTG)n	Simple_repeat	1	32	(0)	603234
515	22.6	2.1	4.9	chr11	22177671	22177814	(112908808)	C	MLT1C	LTR/ERVL-MaLR	(322)	145	6	606551
13	19.4	0.0	5.1	chr11	22193319	22193357	(112893265)	+	GA-rich	Low_complexity	1	39	(0)	606581
1377	15.3	0.0	2.2	chr11	27418833	27419054	(107667568)	C	AluJb	SINE/Alu	(12)	300	84	613903
2923	21.0	5.2	3.7	chr11	27419116	27420086	(107666536)	+	L1ME1	LINE/L1	5181	6162	(17)	613904
338	23.8	4.5	0.0	chr11	27469444	27469527	(107617095)	C	L2c	LINE/L2	(0)	3387	3300	613997
11	24.9	2.0	3.9	chr11	30585974	30585990	(104500632)	+	(CGGCTCC)n	Simple_repeat	1	51	(0)	618702
14	14.2	0.0	3.0	chr11	30585991	30586023	(104500599)	+	(CCGCCC)n	Simple_repeat	1	33	(0)	618703
23	21.9	1.5	1.5	chr11	30586282	30586346	(104500276)	+	(GAGC)n	Simple_repeat	1	66	(0)	618704
2682	5.3	0.0	0.3	chr11	32584326	32584628	(102501994)	+	AluSc8	SINE/Alu	1	302	(9)	621911
1441	22.8	2.0	13.5	chr11	32703995	32704575	(102382047)	+	MER52D	LTR/ERV1	1	972	(1151)	622100
6271	17.7	9.3	0.2	chr11	32704581	32705727	(102380895)	+	LTR2752	LTR/ERV1	1	1263	(0)	622101
2496	7.2	0.3	0.0	chr11	33015348	33015654	(102070968)	C	AluSx1	SINE/Alu	(4)	308	1	622658
19	24.2	1.5	2.9	chr11	33016057	33016123	(102070499)	+	(GGCGTGC)n	Simple_repeat	1	68	(0)	622659
1861	24.2	8.8	3.4	chr11	33324326	33324507	(101762115)	C	Charlie17	DNA/hAT-Charlie	(0)	2916	2733	623301
1625	26.9	6.2	0.4	chr11	33324508	33324959	(101761663)	+	LTR16B1	LTR/ERVL	1	480	(0)	623302
1861	24.2	8.8	3.4	chr11	33324960	33325551	(101761071)	C	Charlie17	DNA/hAT-Charlie	(184)	2732	2096	623301
14	19.3	6.4	0.0	chr11	33774502	33774548	(101312074)	+	(CCTGGC)n	Simple_repeat	1	50	(0)	624031
239	28.0	9.7	1.7	chr11	34439472	34439602	(100647020)	+	L2c	LINE/L2	3257	3374	(1)	625271
373	32.7	13.0	5.5	chr11	34439686	34439976	(100646646)	C	L2b	LINE/L2	(0)	3375	3060	625272
3226	4.0	0.0	0.0	chr11	36189579	36189957	(98896665)	C	L1PA5	LINE/L1	(0)	6154	5776	628010
2383	26.4	12.1	10.7	chr11	36189958	36190269	(98896353)	+	HAL1	LINE/L1	804	1101	(1406)	628006
12	19.4	4.7	2.2	chr11	43579413	43579455	(91507167)	+	G-rich	Low_complexity	1	45	(0)	638677
12	14.8	7.5	2.3	chr11	43579542	43579581	(91507041)	+	(GGTC)n	Simple_repeat	1	43	(0)	638678
12	21.9	3.9	3.8	chr11	43943176	43943226	(91143396)	+	(GCA)n	Simple_repeat	1	53	(0)	639241
189	27.4	8.9	4.2	chr11	44565854	44565971	(90520651)	+	MIRb	SINE/MIR	5	128	(140)	640375
490	25.9	12.8	1.6	chr11	45138034	45138276	(89948346)	+	HAL1	LINE/L1	744	1017	(1490)	641552
1765	19.3	0.3	0.7	chr11	45138285	45138580	(89948042)	+	AluJb	SINE/Alu	1	295	(17)	641557
17	16.6	3.9	3.8	chr11	46381722	46381772	(88704850)	+	(GCGA)n	Simple_repeat	1	53	(0)	643864
18	6.0	5.4	2.6	chr11	46381801	46381837	(88704785)	+	(CTGGGGG)n	Simple_repeat	1	39	(0)	643865
31	0.0	3.0	0.0	chr11	47408554	47408586	(87678036)	+	(GGCCGGGC)n	Simple_repeat	1	34	(0)	645844
12	19.3	0.0	5.1	chr11	47565815	47565853	(87520769)	+	(CCCCGT)n	Simple_repeat	1	39	(0)	646186
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
2254	11.4	1.0	0.0	chr11	47918713	47919018	(87167604)	C	AluSx	SINE/Alu	(3)	309	1	647090
668	25.3	11.2	0.0	chr11	47919019	47919200	(87167422)	+	MIRc	SINE/MIR	51	255	(13)	647091
559	18.7	19.1	3.2	chr11	57493084	57493271	(77593351)	C	MIRb	SINE/MIR	(43)	225	1	653824
561	28.5	6.6	3.4	chr11	57493289	57493524	(77593098)	C	MIRc	SINE/MIR	(8)	260	17	653825
317	27.5	7.1	4.2	chr11	59757072	59757261	(75329361)	C	MIRc	SINE/MIR	(67)	201	6	657382
301	27.6	7.2	3.7	chr11	61793081	61793242	(73293380)	+	MIRb	SINE/MIR	15	182	(86)	660848
12	17.5	3.1	0.0	chr11	61827628	61827659	(73258963)	+	(CCCG)n	Simple_repeat	1	33	(0)	660908
422	25.6	3.5	2.8	chr11	61949805	61949945	(73136677)	C	MIR3	SINE/MIR	(56)	152	11	661151
2330	8.4	0.3	0.3	chr11	62336902	62337198	(72749424)	C	AluSp	SINE/Alu	(16)	297	1	661866
13	18.9	4.5	2.2	chr11	62602409	62602452	(72484170)	+	G-rich	Low_complexity	1	46	(0)	662389
1028	11.2	4.6	2.1	chr11	63459510	63459700	(71626922)	C	L1PA8	LINE/L1	(2843)	3618	3423	663706
3816	12.8	3.7	0.2	chr11	63459716	63460294	(71626328)	C	L1PA8	LINE/L1	(5856)	605	6	663706
372	28.6	7.8	0.7	chr11	63544991	63545145	(71541477)	+	MIR3	SINE/MIR	21	187	(21)	663848
363	25.9	0.4	1.4	chr11	63545356	63545447	(71541175)	C	MIR	SINE/MIR	(109)	99	13	663849
356	26.3	8.8	6.6	chr11	63545435	63545646	(71540976)	C	L2	LINE/L2	(852)	2567	2351	663850
2586	6.4	0.0	0.6	chr11	64236434	64236746	(70849876)	+	AluY	SINE/Alu	1	311	(0)	665238
2163	9.3	0.0	1.4	chr11	64236797	64237085	(70849537)	+	AluSq	SINE/Alu	1	285	(28)	665239
190	31.9	15.7	3.5	chr11	65135550	65135721	(69950901)	C	MIRb	SINE/MIR	(46)	222	26	666904
67	24.2	1.5	5.7	chr11	65524835	65525093	(69561529)	+	(CCGCC)n	Simple_repeat	1	263	(0)	667714
2195	11.1	1.0	0.0	chr11	65873967	65874264	(69212358)	+	AluSx	SINE/Alu	1	301	(11)	668325
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
843	29.1	8.4	0.8	chr11	66031354	66031707	(69054915)	C	ERVL-E-int	LTR/ERVL	(1608)	4059	3677	668688
1361	18.5	0.0	3.5	chr11	66031718	66031949	(69054673)	C	AluJr4	SINE/Alu	(87)	225	2	668689
14	21.8	0.0	8.1	chr11	66277970	66278031	(68808591)	+	G-rich	Low_complexity	1	62	(0)	669165
14	21.2	0.0	7.1	chr11	66278127	66278182	(68808440)	+	(CCCCG)n	Simple_repeat	1	56	(0)	669166
1102	28.1	11.5	2.9	chr11	66887058	66887739	(68198883)	+	HAL1	LINE/L1	595	1342	(1165)	670421
911	23.9	14.1	0.5	chr11	66887820	66888193	(68198429)	C	MLT1D	LTR/ERVL-MaLR	(72)	433	1	670422
981	28.5	5.5	2.3	chr11	66888227	66888668	(68197954)	+	HAL1	LINE/L1	1508	1964	(543)	670421
2403	10.5	0.3	0.0	chr11	67189558	67189852	(67896770)	+	AluSx1	SINE/Alu	1	296	(16)	671176
8449	18.2	4.1	10.1	chr11	67189853	67190127	(67896495)	+	L1M4c	LINE/L1	3261	3528	(2848)	671163
105	1.9	1.9	0.0	chr11	67583298	67583405	(67503217)	+	(ATAAA)n	Simple_repeat	1	110	(0)	671936
16	16.9	0.0	0.0	chr11	69939255	69939281	(65147341)	+	(T)n	Simple_repeat	1	27	(0)	675989
210	18.1	7.8	0.0	chr11	69939386	69939446	(65147176)	C	L2b	LINE/L2	(5)	3421	3324	675990
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
314	26.6	3.1	2.1	chr11	73983760	73983855	(61102767)	C	MIRc	SINE/MIR	(90)	178	82	683166
186	22.9	15.3	3.5	chr11	75626259	75626344	(59460278)	C	MIR3	SINE/MIR	(7)	201	104	686460
554	28.1	7.3	1.2	chr11	75626631	75626850	(59459772)	C	MIRb	SINE/MIR	(1)	267	31	686461
17	11.6	0.0	0.0	chr11	76446050	76446078	(58640544)	+	(TCAT)n	Simple_repeat	1	29	(0)	688050
180	22.0	3.8	10.7	chr11	76446102	76446157	(58640465)	C	L2c	LINE/L2	(0)	3387	3336	688051
1611	15.7	6.6	1.7	chr11	77525063	77525349	(57561273)	+	AluJb	SINE/Alu	1	302	(10)	690088
2365	10.7	0.3	0.0	chr11	77803497	77803785	(57282837)	+	AluSz	SINE/Alu	1	290	(22)	690629
1144	25.5	8.6	11.2	chr11	77803786	77803797	(57282825)	+	MER21C	LTR/ERVL	386	398	(540)	690627
1876	17.3	4.0	0.7	chr11	77803798	77804086	(57282536)	+	AluJr	SINE/Alu	1	299	(13)	690630
1144	25.5	8.6	11.2	chr11	77804087	77804429	(57282193)	+	MER21C	LTR/ERVL	399	754	(184)	690627
16	24.7	3.8	0.0	chr11	77819417	77819469	(57267153)	+	(GCA)n	Simple_repeat	1	55	(0)	690657
12	23.5	0.0	0.0	chr11	78417107	78417141	(56669481)	+	(TGACGC)n	Simple_repeat	1	35	(0)	691988
13	15.3	5.3	2.5	chr11	86800994	86801031	(48285591)	+	(CAC)n	Simple_repeat	1	40	(0)	706149
22839	13.4	2.5	1.0	chr11	95117420	95121260	(39965362)	C	L1MA2	LINE/L1	(3659)	3906	12	718157
1050	32.2	7.0	11.2	chr11	96191787	96191905	(38894717)	+	L3	LINE/CR1	3772	3881	(218)	719776
221	30.9	3.5	0.0	chr11	96191920	96192003	(38894619)	+	L3	LINE/CR1	3953	4039	(60)	719776
21	22.7	4.1	4.8	chr11	102452775	102452889	(32633733)	+	G-rich	Low_complexity	1	114	(0)	727947
2512	8.1	0.0	0.0	chr11	103090632	103090941	(31995681)	+	AluSx3	SINE/Alu	2	311	(0)	728979
270	30.2	8.6	2.8	chr11	103108968	103109185	(31977437)	C	MIRb	SINE/MIR	(8)	260	29	729011
14	17.9	0.0	4.8	chr11	103109529	103109570	(31977052)	+	(CTTCCCC)n	Simple_repeat	1	42	(0)	729012
10531	14.3	2.0	2.9	chr11	105958720	105961070	(29125552)	C	L1PA10	LINE/L1	(4128)	2355	4	732898
240	32.9	4.4	3.4	chr11	105961080	105961258	(29125364)	C	L1MC5	LINE/L1	(2390)	6914	6734	732899
236	28.7	5.4	0.8	chr11	107953299	107953421	(27133201)	C	MLT1N2	LTR/ERVL-MaLR	(2)	560	432	735923
1361	33.9	2.8	2.3	chr11	107953496	107954068	(27132554)	C	ERVL-B4-int	LTR/ERVL	(736)	4978	4403	735924
13	6.6	8.8	2.7	chr11	108552449	108552482	(26534140)	+	(AAGCAAC)n	Simple_repeat	1	37	(0)	737014
1536	16.7	3.5	3.5	chr11	108552644	108552900	(26533722)	+	AluJb	SINE/Alu	11	267	(45)	737015
663	30.6	2.6	7.9	chr11	112354591	112354870	(22731752)	C	LTR78	LTR/ERV1	(287)	1017	753	743003
881	29.6	2.6	0.4	chr11	112354872	112355132	(22731490)	+	LTR33	LTR/ERVL	1	267	(248)	743004
2135	19.4	6.1	0.2	chr11	113937806	113938240	(21148382)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	745429
803	30.7	3.1	1.6	chr11	114178259	114178513	(20908109)	C	MIRb	SINE/MIR	(2)	266	8	745852
456	24.2	13.9	3.0	chr11	119147658	119147823	(15938799)	+	MIRb	SINE/MIR	40	226	(42)	754335
1537	14.5	5.0	5.0	chr11	119210108	119210389	(15876233)	+	AluJb	SINE/Alu	14	295	(17)	754448
688	32.4	6.9	7.1	chr11	120985416	120985807	(14100815)	+	L3	LINE/CR1	3708	4098	(1)	757502
13	23.3	4.4	0.0	chr11	120985966	120986010	(14100612)	+	(CCG)n	Simple_repeat	1	47	(0)	757503
19	9.2	2.9	0.0	chr11	120986286	120986320	(14100302)	+	(GGCGG)n	Simple_repeat	1	36	(0)	757504
2035	11.2	0.0	0.0	chr11	122670794	122671061	(12415561)	C	AluSx	SINE/Alu	(43)	269	2	760007
1112	13.7	0.6	1.2	chr11	122671244	122671404	(12415218)	+	AluJr	SINE/Alu	1	160	(152)	760008
24	25.7	4.4	3.4	chr11	122882875	122882987	(12203635)	+	(GGC)n	Simple_repeat	1	118	(0)	760399
1583	14.7	1.3	12.8	chr11	123096799	123097151	(11989471)	C	AluJo	SINE/Alu	(0)	312	1	760822
1048	19.3	0.0	0.0	chr11	123097159	123097329	(11989293)	C	FAM	SINE/Alu	(14)	171	1	760823
2158	12.2	3.0	0.0	chr11	123097333	123097627	(11988995)	C	AluSx	SINE/Alu	(7)	305	2	760824
31	3.3	0.0	0.0	chr11	123430261	123430291	(11656331)	+	(CT)n	Simple_repeat	1	31	(0)	761530
11155	7.0	5.6	3.4	chr11	125089313	125090854	(9995768)	+	LTR12C	LTR/ERV1	2	1579	(0)	763966
903	27.6	5.5	6.3	chr11	125151086	125151611	(9935011)	C	HAL1	LINE/L1	(1308)	1199	678	764051
321	31.0	5.0	0.0	chr11	125435663	125435775	(9650847)	C	L2a	LINE/L2	(0)	3426	3308	764507
15080	12.3	3.7	1.8	chr11	125871309	125871922	(9214700)	C	HERVIP10F-int	LTR/ERV1	(7080)	657	5	765163
368	31.3	15.9	3.1	chr11	126797166	126797389	(8289233)	+	MIRb	SINE/MIR	5	262	(6)	766664
13	16.4	5.7	5.4	chr11	128694298	128694350	(6392272)	+	(GCGG)n	Simple_repeat	1	56	(0)	769254
6950	11.1	13.8	1.5	chr11	128998667	128999747	(6086875)	+	MER11B	LTR/ERVK	1	1236	(0)	769698
19	22.3	1.9	0.0	chr11	130001846	130001977	(5084645)	+	(CGGCCT)n	Simple_repeat	1	134	(0)	771149
227	32.5	8.6	0.0	chr11	130067806	130067965	(5018657)	C	MIRc	SINE/MIR	(10)	258	84	771317
1262	21.6	2.4	12.3	chr11	130067966	130068381	(5018241)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	771318
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
2085	6.3	1.2	0.0	chr12	642274	642526	(132632783)	C	AluSq2	SINE/Alu	(56)	257	2	779137
27	0.0	3.5	0.0	chr12	990356	990384	(132284925)	+	(AAAACAA)n	Simple_repeat	1	30	(0)	779866
16	17.7	1.7	6.8	chr12	991627	991684	(132283625)	+	G-rich	Low_complexity	1	59	(0)	779869
4727	19.6	3.5	5.8	chr12	2004886	2006018	(131269291)	+	Charlie1a	DNA/hAT-Charlie	1	1106	(349)	781545
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
327	34.1	1.5	0.8	chr12	2256139	2256271	(131019038)	+	MER5A	DNA/hAT-Charlie	51	184	(5)	781931
12	16.6	2.8	2.7	chr12	2537954	2537989	(130737320)	+	(CTCCCC)n	Simple_repeat	1	37	(0)	782348
20	21.7	4.3	5.1	chr12	2959652	2959745	(130315564)	+	(TCGCTCC)n	Simple_repeat	1	98	(0)	783022
17	3.4	6.7	0.0	chr12	2959797	2959826	(130315483)	+	(CTCCG)n	Simple_repeat	1	32	(0)	783023
349	34.1	4.2	2.8	chr12	3611398	3611539	(129663770)	+	MamTip2	DNA/hAT-Tip100	65	208	(97)	784114
281	32.4	10.3	0.7	chr12	4649570	4649718	(128625591)	+	MIRc	SINE/MIR	88	252	(16)	785850
435	27.0	3.6	6.9	chr12	7578327	7578558	(125696751)	C	ERV3-16A3_I-int	LTR/ERVL	(3473)	2284	2001	790522
2121	14.9	0.0	0.0	chr12	7578629	7578971	(125696338)	C	L1PB3	LINE/L1	(18)	6136	5794	790523
3874	22.6	0.4	2.2	chr12	10366614	10367445	(122907864)	+	HERV15-int	LTR/ERV1	4210	5026	(3400)	795150
18	0.0	0.0	0.0	chr12	10723070	10723092	(122552217)	+	(GGT)n	Simple_repeat	1	23	(0)	795576
12	21.0	5.0	4.8	chr12	10723235	10723294	(122552015)	+	(GCGGCT)n	Simple_repeat	1	63	(0)	795577
610	28.9	10.8	3.9	chr12	12567534	12567944	(120707365)	C	L2a	LINE/L2	(1)	3425	2983	798352
192	20.0	25.2	0.0	chr12	12567971	12568065	(120707244)	C	L2a	LINE/L2	(493)	2926	2800	798352
13	8.1	3.9	0.0	chr12	12717774	12717799	(120557510)	+	(TTTGT)n	Simple_repeat	1	27	(0)	798630
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
2032	16.9	6.5	1.6	chr12	19036915	19037352	(114237957)	C	LOR1b	LTR/ERV1	(0)	461	1	807419
513	34.1	11.4	3.9	chr12	19037662	19038251	(114237058)	C	L2b	LINE/L2	(0)	3375	2752	807420
2180	11.3	1.6	1.0	chr12	21438130	21438438	(111836871)	C	AluSx1	SINE/Alu	(1)	311	1	810768
14	28.6	3.1	1.5	chr12	22046170	22046234	(111229075)	+	G-rich	Low_complexity	1	67	(0)	811566
14	20.5	2.6	0.0	chr12	22625288	22625326	(110649983)	+	(CCGC)n	Simple_repeat	1	40	(0)	812441
19	26.9	0.0	3.0	chr12	22625357	22625422	(110649887)	+	(GTC)n	Simple_repeat	1	66	(0)	812442
16	21.6	0.0	0.0	chr12	25691974	25692005	(107583304)	+	A-rich	Low_complexity	1	32	(0)	816833
213	29.3	7.4	0.0	chr12	26043050	26043124	(107232185)	C	L2b	LINE/L2	(6)	3369	3289	817416
16	11.2	7.1	4.4	chr12	26126103	26126144	(107149165)	+	(CG)n	Simple_repeat	1	45	(0)	817541
359	25.2	10.3	9.0	chr12	26434230	26434374	(106840935)	+	MIRb	SINE/MIR	117	262	(0)	817966
206	33.7	4.0	2.1	chr12	26434396	26434492	(106840817)	C	L3	LINE/CR1	(2334)	1765	1667	817963
332	28.3	1.1	1.1	chr12	26434705	26434797	(106840512)	+	MIR3	SINE/MIR	110	202	(6)	817967
218	22.4	1.7	0.0	chr12	27362131	27362188	(105913121)	+	MamGypsy2-LTR	LTR/Gypsy	1	59	(124)	819436
281	27.3	0.0	0.0	chr12	27362243	27362319	(105912990)	+	MamGypsy2-I	LTR/Gypsy	889	965	(3201)	819436
2034	23.9	8.0	8.1	chr12	27362425	27362800	(105912509)	C	L1ME3D	LINE/L1	(10)	6232	5873	819437
4074	18.5	7.9	2.2	chr12	27729976	27730446	(105544863)	C	L1MC3	LINE/L1	(0)	7785	7284	820036
1834	13.9	0.3	7.1	chr12	27730447	27730770	(105544539)	C	AluJb	SINE/Alu	(10)	302	1	820037
1444	12.4	0.5	0.5	chr12	32051312	32051520	(101223789)	+	AluJb	SINE/Alu	89	297	(15)	826695
920	12.2	4.5	0.0	chr12	32051541	32051688	(101223621)	+	Tigger3c	DNA/TcMar-Tigger	149	303	(299)	826696
1172	16.6	20.6	0.0	chr12	32051729	32052090	(101223219)	+	LTR44	LTR/ERV1	26	464	(55)	826697
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
325	30.8	10.3	3.6	chr12	32700395	32700462	(100574847)	+	L1ME4b	LINE/L1	562	636	(256)	827971
1779	17.7	1.1	0.4	chr12	32700466	32700742	(100574567)	+	AluJb	SINE/Alu	1	279	(33)	827972
861	23.3	3.4	1.4	chr12	34316416	34328651	(98946658)	C	GSATII	Satellite/centr	(16)	12475	1	830063
768	18.2	0.7	0.0	chr12	40017389	40017531	(93257778)	+	MER92D	LTR/ERV1	177	320	(0)	833183
16	14.8	0.0	4.9	chr12	42144371	42144411	(91130898)	+	(CCCGCGC)n	Simple_repeat	1	41	(0)	836070
18	19.6	1.7	5.1	chr12	42144639	42144696	(91130613)	+	(CGC)n	Simple_repeat	1	59	(0)	836071
13	5.2	0.0	0.0	chr12	42144751	42144770	(91130539)	+	(CCG)n	Simple_repeat	1	20	(0)	836072
561	27.6	6.0	0.3	chr12	42145087	42145286	(91130023)	+	MIRb	SINE/MIR	6	221	(47)	836073
19	23.2	0.0	3.4	chr12	42237770	42237868	(91037441)	+	(CCCCGC)n	Simple_repeat	1	95	(0)	836251
18	31.3	0.0	2.7	chr12	42237908	42237981	(91037328)	+	(CGC)n	Simple_repeat	1	74	(0)	836252
423	31.4	6.0	2.2	chr12	42238822	42239028	(91036281)	C	MIRb	SINE/MIR	(48)	220	4	836253
34	0.0	0.0	0.0	chr12	42484012	42484048	(90791261)	+	(A)n	Simple_repeat	1	37	(0)	836701
500	19.7	12.8	0.0	chr12	45415355	45415476	(87859833)	+	Charlie8	DNA/hAT-Charlie	119	258	(2170)	840769
453	29.2	6.5	2.8	chr12	47222581	47222830	(86052479)	C	MIR	SINE/MIR	(1)	261	2	843313
241	20.8	6.5	7.7	chr12	47222831	47222861	(86052448)	C	L2	LINE/L2	(1074)	2345	2318	843312
393	24.0	7.1	0.0	chr12	47222889	47222992	(86052317)	C	MER94	DNA/hAT-Blackjack	(19)	115	4	843314
13	14.6	0.0	5.9	chr12	48956305	48956338	(84318971)	+	(ACC)n	Simple_repeat	1	34	(0)	846156
12	20.1	2.9	0.0	chr12	49070012	49070045	(84205264)	+	(GCCGC)n	Simple_repeat	1	35	(0)	846320
299	32.3	0.0	1.0	chr12	49910036	49910135	(83365174)	C	MIR3	SINE/MIR	(60)	148	50	848025
747	18.0	6.2	5.7	chr12	50257828	50257923	(83017386)	C	FLAM_C	SINE/Alu	(68)	65	1	848778
2224	21.7	6.5	20.2	chr12	50257924	50258332	(83016977)	C	L1MC4a	LINE/L1	(990)	7052	6670	848775
1708	15.2	1.5	0.8	chr12	50258333	50258596	(83016713)	C	AluJb	SINE/Alu	(46)	266	1	848779
2472	5.7	1.0	0.3	chr12	50762944	50763244	(82512065)	C	AluSp	SINE/Alu	(10)	303	1	849954
1703	11.7	7.4	5.9	chr12	50763351	50763657	(82511652)	+	AluJo	SINE/Alu	1	312	(0)	849955
23	8.8	0.0	0.0	chr12	50764042	50764077	(82511232)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	849956
1954	11.8	0.3	4.9	chr12	51026748	51026894	(82248415)	+	AluJb	SINE/Alu	1	139	(173)	850435
14	30.6	3.6	2.3	chr12	51327043	51327126	(81948183)	+	(CTCTT)n	Simple_repeat	1	87	(0)	851136
778	15.9	0.0	0.0	chr12	51327143	51327255	(81948054)	C	AluSz6	SINE/Alu	(9)	303	191	851137
2316	10.7	0.0	0.0	chr12	51327468	51327766	(81947543)	C	AluSg4	SINE/Alu	(11)	299	1	851138
4184	6.2	14.5	0.2	chr12	53106564	53107128	(80168181)	C	PABL_A	LTR/ERV1	(0)	660	1	854064
21680	6.1	2.2	0.7	chr12	53107130	53107622	(80167687)	C	PABL_A-int	LTR/ERV1	(1)	5014	4518	854064
13	21.9	3.5	5.0	chr12	53221729	53221786	(80053523)	+	(CCCCG)n	Simple_repeat	1	60	(0)	854282
16	12.6	6.7	2.1	chr12	53344828	53344872	(79930437)	+	G-rich	Low_complexity	1	48	(0)	854517
1423	16.0	3.6	10.8	chr12	53489102	53489342	(79785967)	+	AluJb	SINE/Alu	87	306	(6)	854847
229	19.9	13.7	7.6	chr12	53489344	53489445	(79785864)	+	MIRb	SINE/MIR	48	171	(37)	854849
440	28.1	8.2	0.7	chr12	53601418	53601553	(79673756)	+	UCON62	DNA?	1	147	(30)	855057
1445	16.1	14.2	0.4	chr12	53692243	53692497	(79582812)	C	AluJr4	SINE/Alu	(16)	296	1	855284
40	0.0	0.0	0.0	chr12	54079823	54079856	(79195453)	+	(TG)n	Simple_repeat	1	34	(0)	855832
12	25.1	0.0	4.3	chr12	54358797	54358842	(78916467)	+	(CCTT)n	Simple_repeat	1	46	(0)	856315
16	7.5	0.0	3.3	chr12	56189316	56189345	(77085964)	+	(CCCGG)n	Simple_repeat	1	30	(0)	859048
1882	16.4	1.9	1.6	chr12	56680064	56680374	(76594935)	C	AluSz	SINE/Alu	(0)	312	1	860025
1893	15.5	1.6	1.3	chr12	56680378	56680681	(76594628)	C	AluSq2	SINE/Alu	(8)	305	1	860026
27	0.0	0.0	0.0	chr12	56751967	56751992	(76523317)	+	(T)n	Simple_repeat	1	26	(0)	860184
2306	9.4	0.3	1.3	chr12	56757336	56757644	(76517665)	+	AluSx3	SINE/Alu	1	306	(5)	860197
15	30.3	5.6	0.0	chr12	56770129	56770200	(76505109)	+	GA-rich	Low_complexity	1	76	(0)	860226
2411	6.0	0.3	0.0	chr12	57067044	57067342	(76207967)	+	AluY	SINE/Alu	1	300	(11)	860628
1500	16.0	3.5	0.4	chr12	57067355	57067630	(76207679)	C	Tigger1	DNA/TcMar-Tigger	(2132)	286	2	860629
1806	13.4	0.0	0.4	chr12	57067803	57068070	(76207239)	C	AluJb	SINE/Alu	(45)	267	1	860630
597	28.7	6.5	2.2	chr12	57153636	57153902	(76121407)	C	Charlie19a	DNA/hAT-Charlie	(0)	386	108	860791
15	19.9	3.6	3.5	chr12	57430880	57430934	(75844375)	+	G-rich	Low_complexity	1	57	(0)	861302
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	31.2	0.0	0.0	chr12	57431186	57431196	(75844113)	+	(CGCA)n	Simple_repeat	1	54	(0)	861304
38	17.2	0.0	0.0	chr12	57522713	57522784	(75752525)	+	(GGC)n	Simple_repeat	1	72	(0)	861463
22	31.3	1.7	3.4	chr12	57523024	57523140	(75752169)	+	(CCCCGC)n	Simple_repeat	1	119	(0)	861464
19	6.1	2.6	5.1	chr12	57632695	57632732	(75642577)	+	(CCT)n	Simple_repeat	1	39	(0)	861597
13	12.5	0.0	0.0	chr12	57633134	57633159	(75642150)	+	(CGCAG)n	Simple_repeat	1	26	(0)	861598
252	27.1	2.0	4.0	chr12	57782459	57782558	(75492751)	+	MIRc	SINE/MIR	168	265	(3)	861818
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
1193	32.2	4.2	2.4	chr12	63482929	63483351	(69791958)	+	LTR33B	LTR/ERVL	73	503	(0)	869468
1448	14.2	15.2	1.0	chr12	63944247	63944551	(69330758)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	10	870236
1612	22.3	3.7	2.5	chr12	64161267	64161744	(69113565)	C	HAL1	LINE/L1	(1217)	1290	807	870585
2247	17.1	3.0	4.2	chr12	64161766	64162246	(69113063)	+	L1MB8	LINE/L1	5699	6173	(5)	870586
22	0.0	0.0	0.0	chr12	67355977	67356000	(65919309)	+	(T)n	Simple_repeat	1	24	(0)	875783
355	28.7	9.9	0.7	chr12	69070303	69070439	(64204870)	+	MER5A	DNA/hAT-Charlie	36	186	(3)	878618
200	28.6	10.5	3.8	chr12	69070657	69070736	(64204573)	+	L2a	LINE/L2	3304	3389	(37)	878619
266	17.8	0.0	0.0	chr12	69070737	69070781	(64204528)	+	LTR53	LTR/ERVL	1	45	(474)	878620
667	27.1	14.5	9.3	chr12	69446743	69447087	(63828222)	C	HAL1	LINE/L1	(1592)	915	539	879296
16	7.0	6.7	0.0	chr12	71504120	71504149	(61771160)	+	(TTG)n	Simple_repeat	1	32	(0)	882399
23	30.3	4.6	0.9	chr12	75390913	75391020	(57884289)	+	(CCTCTCC)n	Simple_repeat	1	113	(0)	887474
37	8.1	0.0	0.0	chr12	76031137	76031188	(57244121)	+	(TGC)n	Simple_repeat	1	52	(0)	888509
32	0.0	0.0	0.0	chr12	82686970	82686999	(50588310)	+	(GCTGGG)n	Simple_repeat	1	30	(0)	898090
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
279	36.8	1.9	0.9	chr12	88952790	88952896	(44322413)	C	L2c	LINE/L2	(36)	3351	3244	906228
21	6.9	0.0	0.0	chr12	89526490	89526520	(43748789)	+	(ATGA)n	Simple_repeat	1	31	(0)	907166
12	16.8	10.6	0.0	chr12	94649867	94649913	(38625396)	+	(CCGCGCT)n	Simple_repeat	1	52	(0)	915565
19	24.0	0.0	5.6	chr12	94650284	94650355	(38624954)	+	(CCGC)n	Simple_repeat	1	67	(0)	915566
14	6.8	9.7	0.0	chr12	94650569	94650599	(38624710)	+	(CCG)n	Simple_repeat	1	34	(0)	915567
215	31.7	10.4	0.8	chr12	95003196	95003316	(38271993)	C	MIR3	SINE/MIR	(3)	205	72	916301
13	10.1	9.4	0.0	chr12	95790271	95790302	(37485007)	+	(GCA)n	Simple_repeat	1	35	(0)	917876
14	25.8	3.6	0.0	chr12	95790434	95790488	(37484821)	+	G-rich	Low_complexity	1	57	(0)	917877
361	36.8	7.4	4.8	chr12	96308918	96309430	(36965879)	+	L2c	LINE/L2	2694	3231	(156)	918830
286	25.8	9.3	2.0	chr12	96309438	96309536	(36965773)	+	L1ME3A	LINE/L1	4821	4927	(1219)	918831
2103	21.4	5.5	5.3	chr12	96309549	96310250	(36965059)	+	L1ME3A	LINE/L1	5218	5920	(253)	918831
20	22.1	0.0	4.8	chr12	99984569	99984631	(33290678)	+	GA-rich	Low_complexity	1	63	(0)	924662
13	18.9	2.8	0.0	chr12	100199988	100200023	(33075286)	+	(CCGCTGG)n	Simple_repeat	1	37	(0)	925059
2245	8.6	0.0	0.0	chr12	100200081	100200358	(33074951)	C	AluSx1	SINE/Alu	(34)	278	1	925060
1694	20.7	0.0	2.2	chr12	100276319	100276632	(32998677)	C	AluJb	SINE/Alu	(0)	312	6	925247
2508	23.7	6.6	4.4	chr12	100276642	100278187	(32997122)	C	L1MEc	LINE/L1	(2887)	4567	2947	925245
303	30.9	6.0	4.8	chr12	100427272	100427584	(32847725)	C	L2-3_Crp	LINE/L2	(1008)	1088	772	925530
662	22.4	10.4	3.9	chr12	100427632	100427863	(32847446)	+	HAL1	LINE/L1	808	1056	(1451)	925526
14	0.0	8.3	0.0	chr12	102062252	102062275	(31213034)	+	(AACAA)n	Simple_repeat	1	26	(0)	928502
694	8.1	0.9	17.6	chr12	102062512	102062647	(31212662)	C	AluJr	SINE/Alu	(199)	113	1	928503
2063	11.9	0.0	5.3	chr12	104940636	104940955	(28334354)	+	AluSx1	SINE/Alu	1	303	(9)	933540
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
193	26.2	13.7	0.9	chr12	106358283	106358390	(26916919)	C	MIR1_Amn	SINE/MIR	(84)	146	23	936113
350	23.5	5.7	2.5	chr12	106358391	106358508	(26916801)	+	Charlie4z	DNA/hAT-Charlie	8	129	(38)	936114
314	37.7	7.7	1.2	chr12	106358669	106358910	(26916399)	C	L2c	LINE/L2	(341)	3078	2820	936105
435	20.4	2.1	6.1	chr12	106725063	106725161	(26550148)	C	MLT1G	LTR/ERVL-MaLR	(0)	595	501	936725
550	27.9	7.5	1.0	chr12	106725167	106725365	(26549944)	C	MLT1G	LTR/ERVL-MaLR	(369)	222	10	936725
764	21.9	9.1	11.3	chr12	106725370	106725822	(26549487)	+	L1MEi	LINE/L1	1654	2095	(117)	936723
2499	24.0	9.3	8.7	chr12	107091328	107092108	(26183201)	+	L2a	LINE/L2	2570	3416	(10)	937392
499	27.2	0.0	0.0	chr12	107105370	107105505	(26169804)	C	Tigger9a	DNA/TcMar-Tigger	(596)	136	1	937418
471	29.9	9.4	4.5	chr12	107105654	107106088	(26169221)	C	MamGypLTR1c	LTR/Gypsy	(2)	801	326	937419
506	30.5	6.4	10.6	chr12	107147848	107148580	(26126729)	C	L2-3_Crp	LINE/L2	(937)	1159	60	937505
257	10.8	0.0	0.0	chr12	107645698	107645734	(25629575)	+	L2c	LINE/L2	3337	3373	(14)	938610
716	30.2	6.5	0.3	chr12	108512225	108512510	(24762799)	+	MER102c	DNA/hAT-Charlie	2	306	(25)	940455
319	35.0	0.0	2.4	chr12	108562068	108562190	(24713119)	C	MIRb	SINE/MIR	(111)	157	38	940536
283	33.3	4.7	3.1	chr12	108562160	108562286	(24713023)	+	MIR	SINE/MIR	28	156	(106)	940537
15	29.1	5.9	3.2	chr12	108730695	108730813	(24544496)	+	(CCCCAG)n	Simple_repeat	1	126	(0)	940858
2270	10.7	1.6	0.0	chr12	109434010	109434308	(23841001)	C	AluSx	SINE/Alu	(7)	305	2	942531
211	16.2	0.0	0.0	chr12	109900017	109900053	(23375256)	C	MER5B	DNA/hAT-Charlie	(141)	37	1	943607
258	24.7	7.0	1.9	chr12	109900956	109901076	(23374233)	+	MIR3	SINE/MIR	33	175	(55)	943609
205	34.8	1.4	0.0	chr12	110048838	110048906	(23226403)	C	MIRb	SINE/MIR	(62)	206	137	943867
437	26.3	4.7	7.8	chr12	110048901	110049143	(23226166)	+	L2a	LINE/L2	3128	3362	(64)	943868
342	21.4	7.7	0.0	chr12	110923747	110923830	(22351479)	+	MIRb	SINE/MIR	108	198	(70)	945912
387	31.1	3.5	1.8	chr12	110924182	110924348	(22350961)	+	L1MEj	LINE/L1	423	592	(1568)	945913
916	31.4	8.5	11.7	chr12	111304479	111305246	(21970063)	C	MamGypLTR3a	LTR/Gypsy	(2)	979	239	946756
637	28.0	6.1	2.9	chr12	111685062	111685300	(21590009)	+	MIR	SINE/MIR	12	258	(4)	947656
230	27.4	0.0	0.0	chr12	111685385	111685435	(21589874)	C	L2b	LINE/L2	(87)	3288	3238	947657
15	17.2	0.0	0.0	chr12	111842307	111842339	(21432970)	+	(GGCGGA)n	Simple_repeat	1	33	(0)	948010
18	23.0	1.5	4.5	chr12	111842515	111842580	(21432729)	+	(GCC)n	Simple_repeat	1	67	(0)	948011
2217	10.2	0.0	0.0	chr12	113148927	113149219	(20126090)	+	AluSz	SINE/Alu	1	293	(19)	950909
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
1178	21.5	8.4	7.7	chr12	113351796	113352198	(19923111)	C	L1MC4	LINE/L1	(888)	7154	6749	951365
920	18.9	5.5	9.2	chr12	113485206	113485433	(19789876)	+	MER20	DNA/hAT-Charlie	1	219	(0)	951691
669	28.4	15.1	3.1	chr12	113747532	113748057	(19527252)	+	L2a	LINE/L2	2813	3424	(2)	952398
517	25.5	6.9	2.4	chr12	115564472	115564636	(17710673)	+	MIRb	SINE/MIR	91	263	(5)	956288
1847	17.6	0.0	1.0	chr12	116433819	116434120	(16841189)	+	AluJr	SINE/Alu	1	299	(13)	958036
495	23.9	12.4	4.7	chr12	116910536	116910750	(16364559)	+	L2a	LINE/L2	3192	3425	(1)	959264
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
473	30.1	8.4	6.8	chr12	116916303	116916594	(16358715)	C	Charlie8	DNA/hAT-Charlie	(2037)	391	95	959284
678	17.5	3.3	2.5	chr12	116916617	116916736	(16358573)	+	FLAM_A	SINE/Alu	1	121	(21)	959285
447	20.4	21.0	0.0	chr12	116916738	116916884	(16358425)	C	MLT1H	LTR/ERVL-MaLR	(29)	520	335	959286
272	26.4	0.0	1.4	chr12	117129871	117129943	(16145366)	+	MIRb	SINE/MIR	21	92	(176)	959626
33	16.5	1.1	6.5	chr12	117968829	117968920	(15306389)	+	(TGC)n	Simple_repeat	1	93	(0)	961512
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
12	5.5	0.0	0.0	chr12	117969131	117969149	(15306160)	+	(GGA)n	Simple_repeat	1	19	(0)	961514
19	21.7	1.8	1.8	chr12	117969235	117969289	(15306020)	+	(GCGA)n	Simple_repeat	1	56	(0)	961515
1964	14.6	0.3	0.7	chr12	119217857	119218179	(14057130)	C	AluSz	SINE/Alu	(0)	312	1	964262
382	19.0	1.2	1.2	chr12	119218429	119218508	(14056801)	C	MADE2	DNA/TcMar-Mariner	(0)	80	1	964263
225	22.7	0.0	0.0	chr12	119218515	119218558	(14056751)	C	MIR	SINE/MIR	(110)	152	109	964264
20	8.3	5.0	0.0	chr12	119218570	119218593	(14056716)	+	(ATGA)n	Simple_repeat	1	26	(0)	964265
7146	8.1	15.1	0.4	chr12	119218594	119219646	(14055663)	C	MER11B	LTR/ERVK	(0)	1236	1	964266
332	32.0	0.0	0.0	chr12	119667578	119667674	(13607635)	C	L2	LINE/L2	(571)	2848	2752	965294
14	19.2	4.8	0.0	chr12	119667740	119667781	(13607528)	+	(GCCTGG)n	Simple_repeat	1	44	(0)	965295
4096	20.1	11.6	4.1	chr12	120022555	120023113	(13252196)	+	L1MEc	LINE/L1	4	651	(5749)	966081
12	9.7	0.0	0.0	chr12	120087331	120087352	(13187957)	+	(GGCG)n	Simple_repeat	1	22	(0)	966206
2193	10.8	3.9	0.0	chr12	120313946	120314240	(12961069)	C	AluSx1	SINE/Alu	(5)	307	1	966703
17	0.0	0.0	0.0	chr12	120496742	120496760	(12778549)	+	(T)n	Simple_repeat	1	19	(0)	967224
17	19.6	0.0	4.0	chr12	120496935	120496984	(12778325)	+	G-rich	Low_complexity	1	50	(0)	967225
181	34.8	0.0	2.8	chr12	120497142	120497212	(12778097)	C	MamRTE1	LINE/RTE-BovB	(1715)	2097	2029	967226
18	16.8	2.5	0.0	chr12	120687327	120687366	(12587943)	+	(GCT)n	Simple_repeat	1	41	(0)	967692
15	18.9	6.2	0.0	chr12	120687385	120687432	(12587877)	+	(GGCGC)n	Simple_repeat	1	51	(0)	967693
19	26.8	1.5	1.5	chr12	120903964	120904028	(12371281)	+	(GCTG)n	Simple_repeat	1	66	(0)	968071
13	0.0	0.0	0.0	chr12	120904106	120904122	(12371187)	+	(GCG)n	Simple_repeat	1	17	(0)	968072
1939	10.8	7.7	1.1	chr12	121230121	121230398	(12044911)	+	AluSx	SINE/Alu	1	298	(14)	968914
19	16.8	2.0	3.9	chr12	121352690	121352740	(11922569)	+	(GTT)n	Simple_repeat	1	52	(0)	969185
782	16.2	4.4	1.3	chr12	121352743	121352896	(11922413)	C	FAM	SINE/Alu	(14)	171	13	969186
209	28.4	10.2	0.0	chr12	121422947	121423034	(11852275)	C	MIRb	SINE/MIR	(139)	129	32	969360
1876	14.7	0.0	1.7	chr12	121720430	121720729	(11554580)	+	AluJb	SINE/Alu	3	297	(15)	970170
237	32.8	4.9	0.8	chr12	121798105	121798221	(11477088)	+	MIRb	SINE/MIR	5	126	(142)	970347
14	25.2	3.5	1.7	chr12	121803593	121803650	(11471659)	+	(CCCCCGG)n	Simple_repeat	1	60	(0)	970352
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
1067	14.9	1.2	0.0	chr12	122123700	122123860	(11151449)	C	AluJr4	SINE/Alu	(10)	302	140	971148
23	9.4	0.0	7.5	chr12	122226368	122226420	(11048889)	+	(GGCGG)n	Simple_repeat	1	53	(0)	971354
11	19.6	2.8	9.6	chr12	122774536	122774606	(10500703)	+	G-rich	Low_complexity	1	73	(0)	972649
2729	2.3	0.0	1.6	chr12	122774808	122775116	(10500193)	+	AluY	SINE/Alu	1	304	(7)	972650
11012	9.0	3.9	0.6	chr12	123249828	123251861	(10023448)	C	L1PBa1	LINE/L1	(4515)	2348	252	973619
1856	13.7	3.0	0.0	chr12	123455289	123455580	(9819729)	C	AluJb	SINE/Alu	(9)	303	3	974143
1867	15.5	2.1	10.8	chr12	123455581	123455710	(9819599)	C	L1MC3	LINE/L1	(982)	6803	6690	974137
17	24.8	4.8	0.0	chr12	123972426	123972436	(9302873)	+	(CCCGG)n	Simple_repeat	1	62	(0)	975247
13	24.5	4.2	0.0	chr12	123972437	123972484	(9302825)	+	(CCGCCG)n	Simple_repeat	1	50	(0)	975248
704	25.7	22.0	1.5	chr12	124522280	124522678	(8752631)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	976206
269	17.0	1.9	0.0	chr12	124745566	124745621	(8529688)	+	L2a	LINE/L2	3331	3426	(0)	976732
24	13.0	0.0	0.0	chr12	124745718	124745759	(8529550)	+	(GAAT)n	Simple_repeat	1	42	(0)	976733
367	30.8	2.9	4.3	chr12	124766900	124767106	(8508203)	C	MamRep4096	DNA/hAT-Tip100	(220)	206	3	976784
192	27.2	6.6	0.9	chr12	124767272	124767377	(8507932)	C	L2b	LINE/L2	(0)	3387	3241	976785
12	12.6	3.7	0.0	chr12	125185891	125185917	(8089392)	+	(CCCTC)n	Simple_repeat	1	28	(0)	977730
23	10.5	3.6	3.5	chr12	125186267	125186314	(8088995)	+	(GCCCCG)n	Simple_repeat	1	48	(0)	977731
14	9.7	5.7	2.7	chr12	131860791	131860825	(1414484)	+	G-rich	Low_complexity	1	37	(0)	988709
15	26.7	4.7	3.3	chr12	131863232	131863317	(1411992)	+	G-rich	Low_complexity	1	90	(0)	988715
256	31.6	7.8	8.3	chr12	132090685	132090802	(1184507)	C	L1M5	LINE/L1	(1524)	4622	4504	989066
2095	10.4	1.3	3.9	chr12	132090803	132091111	(1184198)	C	AluSp	SINE/Alu	(12)	301	1	989067
256	31.6	7.8	8.3	chr12	132091112	132091370	(1183939)	C	L1M5	LINE/L1	(1643)	4503	4282	989066
29	27.3	2.5	6.0	chr12	132761991	132762152	(513157)	+	(GCGG)n	Simple_repeat	1	166	(0)	989909
439	18.3	1.9	0.9	chr12	132762410	132762514	(512795)	+	AluJb	SINE/Alu	2	107	(205)	989910
237	18.4	0.0	2.0	chr12	133039788	133039837	(235472)	+	L1MEd	LINE/L1	2117	2165	(4938)	990404
2026	11.8	3.7	0.3	chr12	133039853	133040141	(235168)	C	AluSq2	SINE/Alu	(14)	299	1	990405
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
400	24.1	4.1	2.1	chr12	133181177	133181320	(93989)	C	L1MEg	LINE/L1	(4318)	1766	1620	990655
15	22.2	4.4	4.2	chr13	20703650	20703717	(93660611)	+	(GCACGC)n	Simple_repeat	1	71	(0)	994731
13	11.8	7.7	2.4	chr13	21458926	21458964	(92905364)	+	(GCGTCCG)n	Simple_repeat	1	42	(0)	996140
24	30.0	1.8	2.6	chr13	21459329	21459439	(92904889)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	996141
306	19.5	10.6	6.6	chr13	21682922	21683102	(92681226)	C	Charlie7a	DNA/hAT-Charlie	(49)	223	35	996516
290	31.8	1.8	1.8	chr13	24683675	24683786	(89680542)	+	MIRb	SINE/MIR	120	231	(37)	1000641
12	30.3	0.0	2.0	chr13	25287076	25287125	(89077203)	+	G-rich	Low_complexity	1	50	(0)	1001598
13	22.6	4.1	2.0	chr13	25372302	25372350	(88991978)	+	(GGCGC)n	Simple_repeat	1	51	(0)	1001744
12	26.2	0.0	2.3	chr13	25372552	25372594	(88991734)	+	(GTGCGC)n	Simple_repeat	1	43	(0)	1001745
2228	11.1	0.7	1.6	chr13	26640399	26640705	(87723623)	C	AluSz	SINE/Alu	(7)	305	2	1003577
910	26.9	12.7	4.3	chr13	26640750	26641309	(87723019)	C	HAL1	LINE/L1	(1628)	879	266	1003578
21	20.9	4.9	8.1	chr13	27171732	27171873	(87192455)	+	(CGGCCCC)n	Simple_repeat	1	149	(0)	1004433
14	26.4	3.7	0.0	chr13	27621849	27621902	(86742426)	+	(TCCT)n	Simple_repeat	1	56	(0)	1005252
16	26.0	0.0	1.9	chr13	28718808	28718859	(85645469)	+	(CGCGG)n	Simple_repeat	1	52	(0)	1007214
22	20.5	2.2	6.6	chr13	29595690	29595778	(84768550)	+	(CCCCGC)n	Simple_repeat	1	91	(0)	1008352
643	14.0	0.8	12.7	chr13	29596169	29596318	(84768010)	C	FLAM_C	SINE/Alu	(11)	132	1	1008353
2207	18.7	5.6	8.8	chr13	30052047	30052679	(84311649)	+	LTR36	LTR/ERV1	1	611	(0)	1009033
396	36.9	0.5	2.6	chr13	30052746	30052937	(84311391)	+	LOR1-int	LTR/ERV1	115	302	(1484)	1009034
1248	29.9	10.9	2.9	chr13	30267653	30268402	(84095926)	+	L1MEd	LINE/L1	48	864	(6239)	1009369
50	10.7	1.2	0.0	chr13	30422289	30422369	(83941959)	+	(GCCCA)n	Simple_repeat	1	82	(0)	1009665
22	21.6	3.4	0.0	chr13	30422375	30422433	(83941895)	+	(GGC)n	Simple_repeat	1	61	(0)	1009666
3172	18.2	3.9	0.7	chr13	30544252	30544826	(83819502)	+	MER21B	LTR/ERVL	24	617	(251)	1009930
538	22.5	12.6	0.9	chr13	30544980	30545190	(83819138)	C	HAL1	LINE/L1	(1468)	1039	801	1009931
513	15.8	1.2	0.0	chr13	30545197	30545278	(83819050)	+	FLAM_A	SINE/Alu	42	124	(18)	1009932
2250	11.9	0.3	0.0	chr13	35896257	35896559	(78467769)	+	AluSq2	SINE/Alu	1	304	(9)	1017772
229	35.5	4.9	7.0	chr13	35896689	35897148	(78467180)	C	L2c	LINE/L2	(28)	3359	2910	1017773
272	22.7	0.0	4.3	chr13	36164104	36164172	(78200156)	+	X6B_LINE	LINE/CR1	920	985	(87)	1018152
18	23.8	0.0	0.0	chr13	36919656	36919704	(77444624)	+	(CCCCGC)n	Simple_repeat	1	49	(0)	1019273
22	6.2	0.0	2.8	chr13	36919813	36919848	(77444480)	+	(CCCCA)n	Simple_repeat	1	36	(0)	1019274
17	23.8	0.0	6.1	chr13	36920033	36920098	(77444230)	+	(CCCGCC)n	Simple_repeat	1	66	(0)	1019275
13	25.7	0.0	0.0	chr13	36920150	36920186	(77444142)	+	(CGG)n	Simple_repeat	1	37	(0)	1019276
31	0.0	0.0	0.0	chr13	36920188	36920216	(77444112)	+	(GCG)n	Simple_repeat	1	29	(0)	1019277
15	4.7	0.0	0.0	chr13	40666509	40666530	(73697798)	+	(CGGA)n	Simple_repeat	1	22	(0)	1024471
14	20.6	2.1	4.1	chr13	40666565	40666612	(73697716)	+	(GCT)n	Simple_repeat	1	49	(0)	1024472
17	18.1	3.1	6.1	chr13	40666644	40666707	(73697621)	+	(CCGC)n	Simple_repeat	1	66	(0)	1024473
242	36.8	12.7	1.6	chr13	41317353	41317540	(73046788)	C	MamSINE1	SINE/tRNA-RTE	(0)	290	79	1025654
248	23.1	3.7	0.0	chr13	41317689	41317766	(73046562)	C	Charlie15b	DNA/hAT-Charlie	(5)	1056	976	1025655
319	33.6	7.8	3.4	chr13	41317830	41318063	(73046265)	+	Tigger19a	DNA/TcMar-Tigger	14	258	(65)	1025656
10189	13.9	5.7	3.4	chr13	43056899	43059152	(71305176)	C	L1PB1	LINE/L1	(4349)	2514	3	1028332
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
11	33.5	0.0	4.2	chr13	44575830	44575901	(69788427)	+	(GGAGGC)n	Simple_repeat	1	72	(0)	1030511
13	13.2	0.0	0.0	chr13	44576031	44576055	(69788273)	+	(GCG)n	Simple_repeat	1	25	(0)	1030512
13	5.3	0.0	0.0	chr13	44576189	44576208	(69788120)	+	(TCC)n	Simple_repeat	1	20	(0)	1030513
14	15.9	0.0	0.0	chr13	44576554	44576581	(69787747)	+	(CGC)n	Simple_repeat	1	28	(0)	1030514
14	19.0	4.8	0.0	chr13	44576611	44576652	(69787676)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1030515
14	17.3	5.1	0.0	chr13	44576822	44576860	(69787468)	+	(GCAGCG)n	Simple_repeat	1	41	(0)	1030516
183	32.7	5.3	5.3	chr13	45236107	45236219	(69128109)	+	MamTip2	DNA/hAT-Tip100	40	152	(153)	1031849
340	29.3	9.1	0.6	chr13	45236228	45236409	(69127919)	+	CR1_Mam	LINE/CR1	1318	1516	(688)	1031850
26930	3.4	0.0	0.2	chr13	45664065	45670213	(68694115)	C	L1PA3	LINE/L1	(7)	6148	9	1032641
1043	22.6	5.2	0.0	chr13	46614004	46614277	(67750051)	C	L1MA9	LINE/L1	(36)	6276	5988	1034202
2290	11.5	0.3	0.0	chr13	49829339	49829675	(64534653)	+	AluSq2	SINE/Alu	1	313	(0)	1039128
2213	15.5	6.6	7.0	chr13	49829878	49830335	(64533993)	C	MER31B	LTR/ERV1	(8)	458	3	1039129
13	19.7	0.0	6.5	chr13	49936438	49936483	(64427845)	+	G-rich	Low_complexity	1	46	(0)	1039354
5766	11.2	1.9	0.7	chr13	50275510	50276379	(64087949)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	351	1039885
588	20.4	0.0	2.7	chr13	50276409	50276519	(64087809)	C	Tigger3b	DNA/TcMar-Tigger	(1123)	108	1	1039885
334	33.3	5.5	0.6	chr13	51845543	51845699	(62518629)	+	L3	LINE/CR1	3786	3950	(149)	1042187
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
252	23.7	1.7	0.0	chr13	53064764	53064822	(61299506)	+	L2c	LINE/L2	3283	3342	(45)	1044119
649	31.2	7.3	4.0	chr13	53065076	53065325	(61299003)	C	MIRb	SINE/MIR	(0)	268	10	1044120
1486	35.4	6.2	3.9	chr13	55924584	55925475	(58438853)	+	L1MB8	LINE/L1	11	924	(5943)	1047758
5884	12.8	13.2	0.6	chr13	58949241	58950315	(55414013)	+	MER11B	LTR/ERVK	1	1232	(4)	1051400
21	11.2	0.0	0.0	chr13	60397256	60397285	(53967043)	+	(T)n	Simple_repeat	1	30	(0)	1053462
14	7.3	6.9	0.0	chr13	60397311	60397348	(53966980)	+	(CACCCC)n	Simple_repeat	1	40	(0)	1053463
34	17.6	6.6	1.8	chr13	60397601	60397706	(53966622)	+	(GGCGGCG)n	Simple_repeat	1	113	(0)	1053464
3730	31.4	10.3	6.9	chr13	62010115	62012664	(52351664)	C	HERVL40-int	LTR/ERVL	(1934)	3596	999	1055487
1941	12.3	1.0	7.2	chr13	62385734	62386051	(51978277)	+	AluSz	SINE/Alu	1	298	(14)	1055944
1608	19.0	4.8	1.1	chr13	62701752	62702030	(51662298)	+	AluJb	SINE/Alu	1	290	(22)	1056326
43	0.0	0.0	0.0	chr13	62702032	62702071	(51662257)	+	(AAATA)n	Simple_repeat	1	40	(0)	1056327
2679	18.0	1.0	0.2	chr13	63434009	63434499	(50929829)	+	L1MC1	LINE/L1	5834	6328	(5)	1057270
978	13.9	1.7	2.8	chr13	63434520	63434697	(50929631)	+	L1MA8	LINE/L1	5986	6161	(130)	1057271
15	5.6	0.0	0.0	chr13	63773740	63773758	(50590570)	+	(A)n	Simple_repeat	1	19	(0)	1057719
8668	23.6	5.0	4.2	chr13	63953923	63956106	(50408222)	C	L1M1	LINE/L1	(4630)	2935	12	1057930
2792	28.1	5.4	3.8	chr13	64172401	64173311	(50191017)	+	L1MCb	LINE/L1	47	991	(5054)	1058199
4819	9.8	7.1	0.4	chr13	64708337	64709067	(49655261)	C	HERVK14-int	LTR/ERVK	(5312)	784	1	1058886
2034	11.9	9.3	2.4	chr13	64709068	64709437	(49654891)	C	LTR14B	LTR/ERVK	(0)	608	211	1058886
6043	29.6	6.0	2.8	chr13	65637140	65639509	(48724819)	+	HERVL40-int	LTR/ERVL	2050	4496	(1034)	1060065
414	34.5	9.2	0.9	chr13	65647800	65648336	(48715992)	+	ERVL-int	LTR/ERVL	4768	5379	(378)	1060078
5780	29.9	3.4	3.7	chr13	65675956	65677991	(48686337)	C	L1MA9	LINE/L1	(5135)	2431	403	1060095
15273	20.4	2.4	2.1	chr13	65734122	65739328	(48625000)	+	L1MA4	LINE/L1	2527	7719	(0)	1060158
18	7.8	9.8	0.0	chr13	66656118	66656158	(47708170)	+	A-rich	Low_complexity	1	45	(0)	1061298
2303	6.3	0.0	0.0	chr13	67113555	67113825	(47250503)	C	AluY	SINE/Alu	(19)	292	22	1061872
707	32.3	16.2	3.8	chr13	67738324	67738971	(46625357)	C	L2b	LINE/L2	(1)	3425	2643	1062652
6542	20.1	3.8	2.2	chr13	68067375	68070307	(46294021)	C	L1MB3	LINE/L1	(2311)	4071	1097	1063060
3509	18.7	4.0	1.9	chr13	70300767	70301519	(44062809)	+	L1MC3	LINE/L1	7015	7784	(1)	1065961
379	33.7	14.6	7.2	chr13	72616694	72617096	(41747232)	C	L2c	LINE/L2	(1)	3386	2949	1069055
322	22.5	8.0	11.0	chr13	72726685	72726839	(41637489)	C	MIRb	SINE/MIR	(58)	210	61	1069241
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
20	0.0	0.0	0.0	chr13	73060158	73060179	(41304149)	+	(A)n	Simple_repeat	1	22	(0)	1069857
271	25.2	10.4	2.8	chr13	73657940	73658045	(40706283)	+	LTR88b	LTR/Gypsy?	661	775	(62)	1070896
25	26.0	0.0	2.9	chr13	74133820	74133889	(40230439)	+	(CA)n	Simple_repeat	1	70	(0)	1071555
19	12.4	0.0	0.0	chr13	74134159	74134193	(40230135)	+	(TGGGG)n	Simple_repeat	1	35	(0)	1071556
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
25	26.4	3.1	2.0	chr13	74134473	74134570	(40229758)	+	(CCCGC)n	Simple_repeat	1	101	(0)	1071558
1490	19.5	2.7	4.0	chr13	75444125	75444426	(38919902)	C	AluJr	SINE/Alu	(14)	298	1	1073336
237	37.0	11.7	3.2	chr13	76496641	76496858	(37867470)	C	L2c	LINE/L2	(44)	3343	3105	1074816
240	32.6	4.5	6.8	chr13	76497176	76497382	(37866946)	C	L2c	LINE/L2	(337)	3082	2881	1074816
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
293	9.1	0.0	2.2	chr13	77181379	77181423	(37182905)	+	L1MC4	LINE/L1	7865	7908	(134)	1075816
2102	17.3	2.0	0.5	chr13	78754088	78754471	(35609857)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1077993
219	27.1	0.0	0.0	chr13	78754522	78754569	(35609759)	+	MER5A	DNA/hAT-Charlie	9	56	(133)	1077994
257	15.2	2.1	0.0	chr13	78754589	78754634	(35609694)	+	MER5A1	DNA/hAT-Charlie	106	152	(14)	1077995
1990	16.3	0.3	1.0	chr13	78754648	78754960	(35609368)	C	AluSz6	SINE/Alu	(1)	311	1	1077996
75	16.1	1.9	2.5	chr13	79291014	79291172	(35073156)	+	(TTTC)n	Simple_repeat	1	162	(0)	1078719
19	26.2	0.0	3.0	chr13	79405803	79405869	(34958459)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	1078870
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
10631	11.7	2.6	0.1	chr13	79530420	79532015	(34832313)	C	Tigger1	DNA/TcMar-Tigger	(325)	2093	456	1079098
1641	19.4	2.5	1.9	chr13	79532015	79532330	(34831998)	C	Tigger1	DNA/TcMar-Tigger	(2099)	319	2	1079098
2324	10.4	0.3	0.0	chr13	80025026	80025322	(34339006)	+	AluSx1	SINE/Alu	1	298	(14)	1079674
1212	29.5	5.5	2.8	chr13	80025323	80025409	(34338919)	+	MLT1J-int	LTR/ERVL-MaLR	844	924	(463)	1079672
350	26.1	20.5	3.7	chr13	80025439	80025760	(34338568)	+	MLT1J-int	LTR/ERVL-MaLR	996	1385	(2)	1079672
732	31.1	8.2	1.1	chr13	80025764	80026023	(34338305)	+	MLT1J	LTR/ERVL-MaLR	2	281	(231)	1079672
7141	22.5	3.5	2.2	chr13	81419546	81422813	(32941515)	C	L1PBa	LINE/L1	(2029)	4883	1456	1081538
1516	28.3	4.2	3.5	chr13	85230560	85231181	(29133147)	C	Charlie24	DNA/hAT-Charlie	(1737)	713	88	1086268
4183	20.6	8.2	1.2	chr13	85235098	85236549	(29127779)	+	L1MC2	LINE/L1	4165	5748	(596)	1086274
4635	12.9	1.8	4.3	chr13	86924143	86924946	(27439382)	C	LTR1	LTR/ERV1	(0)	783	1	1088318
4597	16.1	1.0	4.3	chr13	87102444	87103283	(27261045)	+	LTR1B1	LTR/ERV1	7	818	(0)	1088576
4900	16.8	3.1	4.9	chr13	87103284	87103424	(27260904)	C	L1M1	LINE/L1	(2659)	3487	3356	1088575
6358	15.9	1.6	1.2	chr13	88051771	88052895	(26311433)	C	LTR28C	LTR/ERV1	(0)	1129	1	1089819
874	33.9	2.0	5.2	chr13	89038636	89039098	(25325230)	+	LTR16C	LTR/ERVL	42	489	(0)	1091073
49	0.0	0.0	0.0	chr13	89039102	89039143	(25325185)	+	(TC)n	Simple_repeat	1	42	(0)	1091074
959	18.4	1.5	2.9	chr13	90896338	90896544	(23467784)	C	MER96B	DNA/hAT-Tip100	(181)	236	33	1093510
779	31.0	10.3	1.3	chr13	91026686	91027071	(23337257)	C	L2a	LINE/L2	(7)	3419	2995	1093671
267	24.7	10.1	0.0	chr13	91027131	91027219	(23337109)	+	L1M5	LINE/L1	5354	5452	(672)	1093672
1739	24.2	4.1	4.0	chr13	91406364	91406893	(22957435)	+	LTR55	LTR/ERVL?	1	531	(17)	1094205
229	32.9	2.6	2.6	chr13	92125672	92125749	(22238579)	C	L2b	LINE/L2	(3)	3372	3295	1095186
2173	12.0	0.3	1.0	chr13	92125913	92126252	(22238076)	C	AluSg	SINE/Alu	(0)	310	1	1095187
661	1.4	0.0	0.0	chr13	94549650	94549722	(19814606)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1098498
249	26.2	0.0	0.0	chr13	94776612	94776691	(19587637)	+	LTR81B	LTR/Gypsy	1095	1174	(219)	1098885
13	14.8	11.1	1.7	chr13	94967763	94967816	(19396512)	+	(GCGCGGC)n	Simple_repeat	1	60	(0)	1099183
13	4.3	3.9	3.7	chr13	95301318	95301343	(19062985)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1099755
29	0.0	0.0	0.0	chr13	95302343	95302367	(19061961)	+	(GT)n	Simple_repeat	1	25	(0)	1099756
332	12.1	3.3	0.0	chr13	98274431	98274488	(16089840)	C	MADE1	DNA/TcMar-Mariner	(20)	60	1	1104417
263	31.0	3.3	4.1	chr13	98756156	98756276	(15608052)	C	L2a	LINE/L2	(2)	3424	3305	1105193
2571	14.4	4.9	6.2	chr13	98756454	98757070	(15607258)	+	MER4B	LTR/ERV1	1	766	(0)	1105194
1399	22.5	1.5	2.3	chr13	100581893	100582234	(13782094)	+	L1MC3	LINE/L1	7765	8103	(1201)	1108171
1702	18.0	4.5	2.6	chr13	100582380	100582727	(13781601)	+	MLT1D	LTR/ERVL-MaLR	1	355	(150)	1108172
400	24.4	0.0	0.0	chr13	100582762	100582851	(13781477)	C	MIR	SINE/MIR	(166)	96	7	1108173
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
388	30.1	5.2	0.7	chr13	100596361	100596507	(13767821)	C	MIRb	SINE/MIR	(15)	253	100	1108195
1022	20.3	6.7	2.2	chr13	100596508	100596734	(13767594)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	228	1108196
556	33.6	8.7	3.5	chr13	100596757	100597157	(13767171)	+	L3	LINE/CR1	1367	1790	(2309)	1108197
549	28.3	5.6	1.0	chr13	102592225	102592513	(11771815)	C	LTR16B2	LTR/ERVL	(94)	368	66	1111008
388	37.6	8.6	6.3	chr13	107409220	107409614	(6954714)	C	L2b	LINE/L2	(0)	3375	2971	1117408
340	36.0	2.2	4.4	chr13	107409629	107409811	(6954517)	C	MIR	SINE/MIR	(45)	223	45	1117409
31	17.3	4.0	4.8	chr13	110561742	110561853	(3802475)	+	(CGCCCC)n	Simple_repeat	1	111	(0)	1121399
317	29.9	4.5	0.0	chr13	111234403	111234529	(3129799)	C	L2a	LINE/L2	(3)	3423	3291	1122329
1263	25.6	4.2	3.3	chr13	112014497	112014916	(2349412)	C	L1MA9	LINE/L1	(202)	6110	5687	1123068
26	10.9	4.6	4.4	chr13	112072661	112072725	(2291603)	+	(CTCC)n	Simple_repeat	1	68	(0)	1123134
1992	26.4	3.2	0.5	chr13	112575157	112575833	(1788495)	+	L1MEf	LINE/L1	2572	3266	(3271)	1123643
396	27.6	12.9	0.5	chr13	112575843	112576039	(1788289)	+	MLT1D	LTR/ERVL-MaLR	273	497	(8)	1123644
1250	30.0	10.6	2.6	chr14	20277395	20278336	(86765382)	C	L1MC4	LINE/L1	(65)	7977	6952	1127766
17	0.0	0.0	0.0	chr14	20462302	20462320	(86581398)	+	(A)n	Simple_repeat	1	19	(0)	1128083
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
16	19.4	2.4	0.0	chr14	20971438	20971478	(86072240)	+	(CTCC)n	Simple_repeat	1	42	(0)	1128895
9907	13.4	5.3	2.5	chr14	21699435	21702281	(85341437)	+	L1PBa	LINE/L1	538	3507	(3355)	1130265
1879	7.5	6.9	4.5	chr14	22930733	22930999	(84112719)	+	AluSq	SINE/Alu	1	274	(39)	1131979
576	25.5	1.3	6.3	chr14	22957344	22957410	(84086308)	C	MIRb	SINE/MIR	(9)	259	197	1132035
2406	5.5	0.7	0.0	chr14	22957411	22957699	(84086019)	C	AluY	SINE/Alu	(20)	291	1	1132036
198	20.4	8.5	0.0	chr14	23286697	23286750	(83756968)	+	OldhAT1	DNA/hAT-Ac	1842	1900	(948)	1132626
538	18.3	0.0	0.0	chr14	23286858	23286939	(83756779)	+	FLAM_A	SINE/Alu	41	122	(20)	1132627
12	19.5	4.7	2.2	chr14	23539160	23539202	(83504516)	+	(GATGAA)n	Simple_repeat	1	45	(0)	1133006
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
27	22.9	0.9	7.1	chr14	26598275	26598385	(80445333)	+	G-rich	Low_complexity	1	112	(0)	1137004
1599	28.4	11.7	0.7	chr14	29753572	29754249	(77289469)	C	L1ME5	LINE/L1	(114)	6080	5319	1140943
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
205	21.9	1.5	9.9	chr14	31208260	31208330	(75835388)	C	MIRb	SINE/MIR	(82)	186	122	1143147
7081	13.0	2.0	3.1	chr14	31715350	31716594	(75327124)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	1	1144076
13	21.4	2.1	4.2	chr14	32077304	32077356	(74966362)	+	GA-rich	Low_complexity	1	51	(0)	1144640
15	17.7	0.0	0.0	chr14	32077370	32077401	(74966317)	+	(CGC)n	Simple_repeat	1	32	(0)	1144641
682	29.4	6.9	5.1	chr14	32130851	32131303	(74912415)	C	L1MC4	LINE/L1	(6)	8036	7623	1144709
7706	9.2	1.1	0.2	chr14	35033780	35034802	(72008916)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	549	1149213
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
2231	30.0	10.7	2.3	chr14	35607026	35607932	(71435786)	+	L1MB8	LINE/L1	11	1222	(5645)	1150304
425	28.5	4.8	1.2	chr14	36833552	36833711	(70210007)	+	Plat_L3	LINE/CR1	2263	2428	(1158)	1152117
247	7.3	0.0	2.4	chr14	36924716	36924757	(70118961)	+	MER2	DNA/TcMar-Tigger	136	176	(169)	1152234
1135	17.3	0.5	0.5	chr14	36924779	36924970	(70118748)	+	MER2	DNA/TcMar-Tigger	154	345	(0)	1152235
2517	27.0	6.0	2.4	chr14	36924971	36925564	(70118154)	+	L1MEc	LINE/L1	2033	2647	(3672)	1152231
1650	19.3	5.9	0.0	chr14	39414659	39414943	(67628775)	C	AluJb	SINE/Alu	(9)	303	1	1155695
12980	14.1	2.8	6.6	chr14	39414944	39415485	(67628233)	C	Tigger1	DNA/TcMar-Tigger	(2014)	404	1	1155694
1680	14.1	6.7	0.0	chr14	45253801	45254063	(61789655)	C	AluJb	SINE/Alu	(30)	282	1	1162926
40	20.7	3.2	0.0	chr14	47674786	47674879	(59368839)	+	(CA)n	Simple_repeat	1	97	(0)	1165885
22	20.0	0.0	6.9	chr14	47674984	47675055	(59368663)	+	(GCG)n	Simple_repeat	1	72	(0)	1165886
2827	1.0	0.0	0.0	chr14	49586580	49586879	(57456839)	+	7SLRNA	srpRNA	1	300	(20)	1168209
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
684	19.6	18.1	8.6	chr14	49692523	49692907	(57350811)	+	L1MC5a	LINE/L1	2049	2478	(299)	1168427
32	31.1	0.0	3.7	chr14	49767978	49768120	(57275598)	+	(GGC)n	Simple_repeat	1	137	(0)	1168592
17	4.3	0.0	0.0	chr14	50312360	50312383	(56731335)	+	(CTCC)n	Simple_repeat	1	24	(0)	1169748
22	14.7	2.2	0.0	chr14	50312611	50312655	(56731063)	+	(CGCCCC)n	Simple_repeat	1	46	(0)	1169749
187	31.9	13.8	0.0	chr14	50312897	50312965	(56730753)	C	L2b	LINE/L2	(22)	3353	3274	1169750
1527	22.6	6.9	3.0	chr14	50440795	50441563	(56602155)	+	L1MC4	LINE/L1	6682	7622	(420)	1169989
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
19	11.5	2.6	0.0	chr14	50560764	50560801	(56482917)	+	(GGGCGGC)n	Simple_repeat	1	39	(0)	1170157
25	21.7	2.1	5.2	chr14	51651786	51651879	(55391839)	+	G-rich	Low_complexity	1	96	(0)	1171808
1658	16.2	7.7	0.4	chr14	54131288	54131565	(52912153)	C	AluJo	SINE/Alu	(12)	300	1	1175494
359	27.1	5.4	2.8	chr14	54328938	54329081	(52714637)	+	Charlie29a	DNA/hAT-Charlie	572	719	(0)	1175775
765	17.9	1.6	0.0	chr14	55304369	55304491	(51739227)	C	AluJr	SINE/Alu	(187)	125	1	1177461
1916	16.2	1.1	0.0	chr14	55304514	55304797	(51738921)	C	AluJr4	SINE/Alu	(25)	287	1	1177462
1915	17.3	1.8	0.0	chr14	56514601	56514929	(50528789)	+	L1MB3	LINE/L1	5842	6176	(7)	1179307
20	0.0	0.0	0.0	chr14	58746605	58746626	(48297092)	+	(A)n	Simple_repeat	1	22	(0)	1182740
250	15.8	20.8	1.3	chr14	58879220	58879296	(48164422)	C	Charlie18a	DNA/hAT-Charlie	(134)	208	113	1182941
524	31.2	8.2	2.9	chr14	59577028	59577234	(47466484)	C	MIRb	SINE/MIR	(1)	267	50	1183903
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
468	20.7	0.0	0.0	chr14	60165538	60165624	(46878094)	+	AluSz	SINE/Alu	48	134	(178)	1184650
2508	7.1	0.7	0.3	chr14	60247348	60247655	(46796063)	+	AluY	SINE/Alu	1	309	(2)	1184788
15	24.0	0.0	0.0	chr14	60657425	60657437	(46386281)	+	A-rich	Low_complexity	1	38	(0)	1185333
13	8.5	4.0	0.0	chr14	60657438	60657462	(46386256)	+	(AAGA)n	Simple_repeat	1	26	(0)	1185334
1563	18.4	1.1	4.1	chr14	60769290	60769582	(46274136)	C	AluJo	SINE/Alu	(27)	285	2	1185545
276	17.3	0.0	0.0	chr14	60769592	60769643	(46274075)	C	L1MB2	LINE/L1	(4)	6167	6116	1185546
1584	17.4	3.0	5.9	chr14	60769661	60769964	(46273754)	C	AluJr4	SINE/Alu	(17)	295	1	1185547
12	19.3	0.0	10.3	chr14	61695436	61695493	(45348225)	+	(CCCTCC)n	Simple_repeat	1	58	(0)	1186912
13	21.9	2.3	2.2	chr14	61695857	61695900	(45347818)	+	(GCCC)n	Simple_repeat	1	45	(0)	1186913
791	21.6	8.4	0.9	chr14	61824738	61824947	(45218771)	+	Charlie1	DNA/hAT-Charlie	1	227	(2554)	1187135
522	21.6	5.0	0.0	chr14	61824942	61825075	(45218643)	+	Charlie1a	DNA/hAT-Charlie	1314	1454	(1)	1187136
658	31.7	7.4	9.4	chr14	61825136	61825286	(45218432)	C	HAL1	LINE/L1	(1655)	852	692	1187137
5010	14.7	5.4	5.9	chr14	61825287	61825411	(45218307)	C	MER6	DNA/TcMar-Tigger	(1)	864	755	1187138
2016	12.8	0.4	1.1	chr14	61825412	61825684	(45218034)	+	AluJo	SINE/Alu	14	284	(28)	1187139
5061	8.2	1.6	0.9	chr14	63752835	63753510	(43290208)	C	LTR8	LTR/ERV1	(10)	681	1	1189960
335	15.8	0.0	0.0	chr14	63753511	63753567	(43290151)	+	AluJb	SINE/Alu	238	294	(8)	1189959
2401	8.8	1.0	0.0	chr14	63753590	63753894	(43289824)	+	AluSp	SINE/Alu	1	308	(5)	1189961
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
593	24.0	6.4	3.3	chr14	64914881	64915061	(42128657)	C	MIR3	SINE/MIR	(16)	192	6	1192089
712	32.2	10.2	10.9	chr14	65242818	65243843	(41799875)	C	L2c	LINE/L2	(0)	3387	2291	1192726
421	28.1	5.0	0.0	chr14	65243844	65243957	(41799761)	+	L2a	LINE/L2	3307	3426	(0)	1192727
712	32.2	10.2	10.9	chr14	65243958	65244602	(41799116)	C	L2c	LINE/L2	(0)	2290	1600	1192726
1013	26.9	12.9	7.2	chr14	65255121	65255592	(41788126)	C	MamGypLTR1a	LTR/Gypsy	(281)	503	1	1192746
1284	12.8	0.0	0.5	chr14	65324499	65324685	(41719033)	+	AluJb	SINE/Alu	120	305	(7)	1192921
2468	6.9	0.0	0.7	chr14	65324994	65325298	(41718420)	+	AluSx	SINE/Alu	1	303	(9)	1192922
1756	20.4	0.0	2.2	chr14	67603051	67603368	(39440350)	C	AluJb	SINE/Alu	(0)	312	2	1196389
17	14.6	4.1	3.9	chr14	68978887	68978899	(38064819)	+	G-rich	Low_complexity	1	55	(0)	1198594
23	0.0	2.4	7.0	chr14	68978900	68978941	(38064777)	+	(GGGGCTG)n	Simple_repeat	1	43	(0)	1198595
14	22.6	0.0	2.3	chr14	69152240	69152282	(37891436)	+	(CCCCCGG)n	Simple_repeat	1	43	(0)	1198956
32	0.0	0.0	0.0	chr14	70189158	70189187	(36854531)	+	(CCCGCAT)n	Simple_repeat	1	30	(0)	1200822
2513	4.7	0.3	4.4	chr14	70359990	70360306	(36683412)	+	AluSq10	SINE/Alu	1	304	(9)	1201067
15	4.1	4.0	0.0	chr14	70642540	70642564	(36401154)	+	(GCCGC)n	Simple_repeat	1	26	(0)	1201470
15	23.1	7.0	3.3	chr14	73786983	73787068	(33256650)	+	(GCCCGA)n	Simple_repeat	1	92	(0)	1207060
2411	10.3	0.0	0.0	chr14	74152681	74152982	(32890736)	+	AluSg	SINE/Alu	2	303	(7)	1207920
882	27.2	14.5	8.4	chr14	74301928	74302614	(32741104)	+	L1ME5	LINE/L1	5419	6187	(7)	1208197
1952	11.7	0.3	0.0	chr14	74303844	74304150	(32739568)	C	AluSp	SINE/Alu	(0)	313	1	1208202
30	19.6	6.3	4.4	chr14	74426050	74426176	(32617542)	+	(GCC)n	Simple_repeat	1	135	(0)	1208508
14	28.2	0.0	3.4	chr14	74426337	74426395	(32617323)	+	G-rich	Low_complexity	1	59	(0)	1208509
14	18.3	2.7	0.0	chr14	74618882	74618918	(32424800)	+	(TTCAC)n	Simple_repeat	1	38	(0)	1208846
2282	10.2	0.0	1.6	chr14	75068008	75068312	(31975406)	+	AluSq	SINE/Alu	1	300	(13)	1209668
18	3.3	2.9	5.6	chr14	75068331	75068365	(31975353)	+	(AAAAC)n	Simple_repeat	1	36	(0)	1209669
13	9.8	0.0	0.0	chr14	80955697	80955718	(26088000)	+	(TGC)n	Simple_repeat	1	22	(0)	1219892
14	14.6	5.0	2.4	chr14	88554542	88554581	(18489137)	+	G-rich	Low_complexity	1	42	(0)	1230606
20	16.6	5.3	5.1	chr14	88554639	88554713	(18489005)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	1230607
13	23.3	4.4	0.0	chr14	88554937	88554981	(18488737)	+	(GGAC)n	Simple_repeat	1	47	(0)	1230608
14	8.4	0.0	3.7	chr14	88792539	88792565	(18251153)	+	(GCG)n	Simple_repeat	1	27	(0)	1230964
27	0.0	3.3	0.0	chr14	88792942	88792971	(18250747)	+	(CCGAG)n	Simple_repeat	1	31	(0)	1230965
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
34	16.9	1.3	4.5	chr14	90758324	90758481	(16285237)	+	(GGCGG)n	Simple_repeat	1	152	(0)	1234414
2191	11.8	1.6	0.0	chr14	90796839	90797144	(16246574)	C	AluSz6	SINE/Alu	(1)	311	1	1234487
2175	26.8	9.8	4.1	chr14	91030509	91031839	(16011879)	+	HAL1	LINE/L1	790	2205	(302)	1234880
1161	32.4	5.7	2.8	chr14	91378489	91379100	(15664618)	C	L1ME3F	LINE/L1	(78)	6165	5535	1235596
20	15.7	1.9	3.7	chr14	91417700	91417752	(15625966)	+	(GCGCCCC)n	Simple_repeat	1	54	(0)	1235654
17	19.5	0.0	0.0	chr14	92040521	92040551	(15003167)	+	A-rich	Low_complexity	1	31	(0)	1236758
2381	9.3	0.3	0.0	chr14	93112438	93112737	(13930981)	C	AluSc8	SINE/Alu	(10)	301	1	1238814
900	14.2	2.1	0.0	chr14	94433860	94434000	(12609718)	+	MSTD	LTR/ERVL-MaLR	253	396	(0)	1241129
406	22.0	10.7	1.0	chr14	95078458	95078558	(11965160)	C	L4_A_Mam	LINE/RTE-X	(210)	4780	4669	1242418
19	18.9	0.0	0.0	chr14	95078725	95078760	(11964958)	+	A-rich	Low_complexity	1	36	(0)	1242419
1222	29.1	11.4	8.7	chr14	96609818	96610586	(10433132)	C	HAL1	LINE/L1	(1340)	1167	376	1245198
3242	22.2	2.0	0.5	chr14	99748689	99749443	(7294275)	C	L1MB8	LINE/L1	(44)	6134	5369	1250552
2993	16.2	4.7	0.4	chr14	99869115	99869627	(7174091)	+	Tigger1	DNA/TcMar-Tigger	1	536	(1882)	1250764
20	25.4	2.7	6.2	chr14	99971306	99971415	(7072303)	+	(CCGCCC)n	Simple_repeat	1	113	(0)	1250931
15	9.1	4.2	0.0	chr14	100567749	100567772	(6475946)	+	(CA)n	Simple_repeat	1	25	(0)	1252064
2335	9.9	0.0	0.3	chr14	100664581	100664883	(6378835)	C	AluSx3	SINE/Alu	(9)	302	1	1252232
303	31.0	8.4	3.4	chr14	101240292	101240368	(5803350)	C	MIR3	SINE/MIR	(23)	185	98	1252911
1866	24.6	1.8	2.9	chr14	101240369	101240879	(5802839)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1252912
20	20.2	4.7	1.5	chr14	102592774	102592837	(4450881)	+	(CCCGC)n	Simple_repeat	1	67	(0)	1255260
65	18.6	0.7	0.7	chr14	102592946	102593081	(4450637)	+	(CGCCGC)n	Simple_repeat	1	137	(0)	1255261
22	5.6	2.6	2.5	chr14	102593199	102593237	(4450481)	+	(CCGCGCC)n	Simple_repeat	1	40	(0)	1255262
13	24.0	4.8	0.0	chr14	102775020	102775061	(4268657)	+	GA-rich	Low_complexity	1	44	(0)	1255664
276	27.9	0.0	0.0	chr14	103013374	103013441	(4030277)	C	MIR	SINE/MIR	(79)	183	116	1256033
1129	25.6	10.0	1.0	chr14	103013462	103013860	(4029858)	+	MLT1C	LTR/ERVL-MaLR	6	444	(23)	1256034
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
3249	16.8	9.2	1.3	chr14	104462498	104463189	(2580529)	+	Tigger3	DNA/TcMar-Tigger	2278	3029	(0)	1258446
9782	10.7	6.7	6.7	chr14	104750448	104752026	(2291692)	C	LTR12C	LTR/ERV1	(0)	1579	1	1258775
1100	19.7	4.0	0.5	chr14	104752292	104752509	(2291209)	+	AluJb	SINE/Alu	73	298	(14)	1258776
31	15.8	0.0	7.8	chr14	105021289	105021378	(2022340)	+	(GCCCC)n	Simple_repeat	1	90	(0)	1259101
2322	24.9	5.1	5.0	chr15	28902097	28902743	(73088446)	+	L1MC3	LINE/L1	7130	7777	(8)	1274721
1986	10.4	2.7	0.3	chr15	34513965	34514253	(67476936)	C	AluSq10	SINE/Alu	(17)	296	1	1282966
232	30.7	5.4	1.1	chr15	35696760	35696848	(66294341)	C	MLT1O	LTR/ERVL-MaLR	(347)	195	103	1284707
15	20.6	0.0	6.0	chr15	38564665	38564714	(63426475)	+	(CGC)n	Simple_repeat	1	50	(0)	1288523
41	4.5	0.0	0.0	chr15	40358234	40358279	(61632910)	+	(CCG)n	Simple_repeat	1	46	(0)	1291052
16	8.7	0.0	0.0	chr15	40358333	40358357	(61632832)	+	(CAG)n	Simple_repeat	1	25	(0)	1291053
13	24.8	0.0	0.0	chr15	41417066	41417103	(60574086)	+	G-rich	Low_complexity	1	38	(0)	1293314
12	27.7	3.5	1.7	chr15	41417104	41417123	(60574066)	+	(CGGAGCG)n	Simple_repeat	1	60	(0)	1293315
16	12.1	0.0	0.0	chr15	41417143	41417170	(60574019)	+	(GCG)n	Simple_repeat	1	28	(0)	1293316
14	8.3	0.0	6.7	chr15	41514140	41514169	(60477020)	+	(GTG)n	Simple_repeat	1	30	(0)	1293532
361	26.9	45.8	3.3	chr15	42108297	42108449	(59882740)	+	HAL1	LINE/L1	420	637	(1870)	1294568
981	27.4	2.2	11.6	chr15	42108475	42108834	(59882355)	+	HAL1	LINE/L1	637	977	(1530)	1294568
2681	13.1	0.9	0.2	chr15	42108835	42109263	(59881926)	C	MER57A1	LTR/ERV1	(0)	432	1	1294569
20	32.9	1.0	2.9	chr15	42920635	42920737	(59070452)	+	(GCT)n	Simple_repeat	1	104	(0)	1296017
15	27.3	1.8	1.8	chr15	42920715	42920769	(59070420)	+	(CCG)n	Simple_repeat	1	56	(0)	1296018
12	31.9	0.0	0.0	chr15	43133656	43133702	(58857487)	+	(GGCCCC)n	Simple_repeat	1	47	(0)	1296447
14	23.4	3.4	3.3	chr15	43133895	43133953	(58857236)	+	(GCCCGC)n	Simple_repeat	1	61	(0)	1296448
230	18.6	1.9	4.2	chr15	43371787	43371849	(58619340)	+	L2c	LINE/L2	3316	3387	(0)	1296865
548	23.5	15.3	0.8	chr15	43371934	43372125	(58619064)	C	MIRb	SINE/MIR	(32)	236	13	1296866
18	17.6	2.7	7.8	chr15	45167093	45167167	(56824022)	+	(GCCGCGG)n	Simple_repeat	1	77	(0)	1300158
1775	6.1	0.0	0.5	chr15	45199770	45199983	(56791206)	+	AluSx3	SINE/Alu	99	311	(0)	1300218
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
423	25.2	2.1	4.1	chr15	45204972	45205116	(56786073)	+	MER5A1	DNA/hAT-Charlie	25	166	(0)	1300227
49	2.1	0.0	0.0	chr15	45205477	45205525	(56785664)	+	(ATCC)n	Simple_repeat	1	49	(0)	1300228
27	3.5	0.0	0.0	chr15	52019445	52019474	(49971715)	+	(CGG)n	Simple_repeat	1	30	(0)	1310541
236	30.6	12.3	4.1	chr15	52699524	52699717	(49291472)	+	L2	LINE/L2	2740	2951	(468)	1311741
18	30.6	0.0	0.0	chr15	55588184	55588243	(46402946)	+	(CGC)n	Simple_repeat	1	60	(0)	1315825
19	12.0	4.1	3.9	chr15	55588493	55588541	(46402648)	+	(CGCCTC)n	Simple_repeat	1	51	(0)	1315826
30	15.3	1.7	0.0	chr15	55993613	55993670	(45997519)	+	GA-rich	Low_complexity	1	59	(0)	1316534
332	30.4	3.6	4.9	chr15	57705997	57706138	(44285051)	+	MER20B	DNA/hAT-Charlie	29	168	(615)	1319091
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
1489	22.4	5.2	8.3	chr15	59449812	59449911	(42541278)	C	L1ME3Cz	LINE/L1	(341)	656	574	1322091
1660	16.6	3.3	5.8	chr15	59449912	59450224	(42540965)	C	AluJb	SINE/Alu	(2)	310	6	1322093
1489	23.4	5.5	8.0	chr15	59450225	59450671	(42540518)	C	L1ME3Cz	LINE/L1	(424)	573	182	1322094
415	25.9	0.7	2.7	chr15	63134141	63134287	(38856902)	+	MER112	DNA/hAT-Charlie	2	145	(116)	1328022
627	26.9	7.0	8.8	chr15	63134293	63134755	(38856434)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	2	1328023
2267	9.5	0.3	0.0	chr15	63487695	63487990	(38503199)	C	AluSx1	SINE/Alu	(3)	309	13	1328673
44	13.7	1.6	8.5	chr15	65319137	65319247	(36671942)	+	(TCT)n	Simple_repeat	1	103	(0)	1332389
2175	9.2	0.0	0.3	chr15	65319248	65319539	(36671650)	C	AluSg4	SINE/Alu	(18)	292	2	1332390
4046	27.1	8.8	5.8	chr15	65971074	65972426	(36018763)	+	HAL1	LINE/L1	11	1464	(1043)	1333721
1360	21.6	6.2	3.3	chr15	66042533	66042983	(35948206)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	1333885
15	12.7	0.0	5.3	chr15	66293695	66293732	(35697457)	+	(CCGCAGC)n	Simple_repeat	1	38	(0)	1334370
23	23.0	3.2	4.2	chr15	66293740	66293832	(35697357)	+	G-rich	Low_complexity	1	96	(0)	1334371
17	20.9	0.0	5.5	chr15	66702311	66702366	(35288823)	+	(GAGC)n	Simple_repeat	1	52	(0)	1335298
205	31.2	11.1	4.3	chr15	67096991	67097107	(34894082)	+	MIR1_Amn	SINE/MIR	7	132	(98)	1336067
1625	16.6	0.3	9.9	chr15	67097201	67097544	(34893645)	C	AluJb	SINE/Alu	(1)	311	1	1336068
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
495	30.3	11.0	2.3	chr15	68078627	68078842	(33912347)	+	MIRb	SINE/MIR	32	268	(0)	1337705
2372	10.9	0.0	0.0	chr15	68604834	68605135	(33386054)	+	AluSg	SINE/Alu	1	302	(8)	1338656
1581	26.6	2.8	1.6	chr15	68605239	68605666	(33385523)	+	L1ME4c	LINE/L1	296	728	(102)	1338657
21	16.2	2.9	5.6	chr15	70097012	70097080	(31894109)	+	G-rich	Low_complexity	1	71	(0)	1341462
17	20.2	2.0	2.0	chr15	70097428	70097476	(31893713)	+	(CTGCCG)n	Simple_repeat	1	50	(0)	1341463
31	11.2	2.0	0.0	chr15	70097767	70097815	(31893374)	+	(AC)n	Simple_repeat	1	50	(0)	1341464
335	28.6	10.4	1.6	chr15	70487767	70487940	(31503249)	C	MIRb	SINE/MIR	(25)	205	22	1342242
247	33.3	10.7	1.4	chr15	70488396	70488614	(31502575)	C	MIRc	SINE/MIR	(8)	260	19	1342243
487	27.6	10.2	2.5	chr15	70856452	70856696	(31134493)	+	Charlie16a	DNA/hAT-Charlie	64	329	(13)	1342872
383	28.4	5.0	6.6	chr15	71689291	71689490	(30301699)	+	MIRc	SINE/MIR	2	212	(56)	1344173
1436	16.3	0.9	0.0	chr15	71973003	71973229	(30017960)	+	MER21-int	LTR/ERVL	273	501	(3690)	1344657
319	20.7	21.9	0.0	chr15	71973238	71973319	(30017870)	C	MER21A	LTR/ERVL	(218)	713	609	1344658
2583	18.5	1.1	1.7	chr15	71973320	71973787	(30017402)	+	MER4B-int	LTR/ERV1	3536	4000	(2758)	1344659
2267	11.5	0.3	3.9	chr15	72070160	72070471	(29920718)	+	AluSx	SINE/Alu	1	301	(11)	1344844
862	15.2	0.8	0.0	chr15	72070585	72070702	(29920487)	+	AluSx3	SINE/Alu	177	295	(16)	1344845
3464	12.2	2.6	1.8	chr15	72070703	72071458	(29919731)	+	L1P4	LINE/L1	4790	5557	(609)	1344846
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
25	27.0	1.0	4.0	chr15	72474642	72474752	(29516437)	+	(GGACGA)n	Simple_repeat	1	107	(0)	1345548
286	32.5	10.3	5.0	chr15	73555391	73555730	(28435459)	+	L2c	LINE/L2	3023	3382	(5)	1347318
30	23.8	4.0	1.0	chr15	73752907	73753006	(28238183)	+	G-rich	Low_complexity	1	104	(0)	1347658
1803	13.9	0.7	0.7	chr15	73992528	73992801	(27998388)	+	AluJr	SINE/Alu	2	275	(37)	1348058
28	14.0	5.8	4.4	chr15	74054087	74054172	(27937017)	+	G-rich	Low_complexity	1	91	(0)	1348180
640	19.1	2.2	0.0	chr15	74054389	74054519	(27936670)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	1348181
1434	11.6	22.1	0.0	chr15	74894408	74894639	(27096550)	+	AluSz	SINE/Alu	1	298	(14)	1349717
1205	14.5	0.0	0.0	chr15	74894641	74894806	(27096383)	+	AluSz6	SINE/Alu	137	302	(10)	1349718
1430	28.8	4.8	6.9	chr15	75241090	75241490	(26749699)	+	L1MEg	LINE/L1	221	598	(5644)	1350435
2319	10.6	0.6	0.6	chr15	75241491	75241802	(26749387)	C	AluSx1	SINE/Alu	(0)	312	1	1350436
659	17.1	3.7	0.0	chr15	75307927	75308055	(26683134)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	1350535
17	26.4	0.0	0.0	chr15	75647818	75647867	(26343322)	+	(CTCCTCC)n	Simple_repeat	1	50	(0)	1351301
12	11.6	3.3	3.2	chr15	75648019	75648048	(26343141)	+	(GGAC)n	Simple_repeat	1	31	(0)	1351302
255	34.5	2.6	7.4	chr15	75841153	75841274	(26149915)	+	L2c	LINE/L2	3268	3383	(4)	1351609
416	20.2	5.7	0.0	chr15	75841650	75841748	(26149441)	+	Charlie4z	DNA/hAT-Charlie	39	143	(24)	1351615
13	17.6	0.0	2.9	chr15	76338004	76338037	(25653152)	+	G-rich	Low_complexity	1	34	(0)	1352424
3648	20.2	6.7	4.6	chr15	76786346	76787383	(25203806)	+	L1MDa	LINE/L1	4235	5295	(1242)	1353031
1104	18.0	1.7	0.0	chr15	76787446	76787623	(25203566)	C	AluJo	SINE/Alu	(131)	181	1	1353038
1815	18.7	7.8	1.7	chr15	76787629	76788207	(25202982)	+	L1MDa	LINE/L1	5292	5915	(835)	1353031
495	10.1	1.2	1.2	chr15	76963369	76963448	(25027741)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	1353311
634	19.3	0.0	1.7	chr15	76963465	76963583	(25027606)	C	FLAM_A	SINE/Alu	(25)	117	1	1353312
1815	16.5	2.7	0.7	chr15	77428687	77428977	(24562212)	+	AluJo	SINE/Alu	1	297	(15)	1354033
291	21.7	16.8	2.3	chr15	78151064	78151195	(23839994)	+	MIR3	SINE/MIR	5	159	(49)	1355319
14	17.3	5.1	0.0	chr15	79311269	79311280	(22679909)	+	(GCTCCT)n	Simple_repeat	1	38	(0)	1357652
15	8.9	0.0	0.0	chr15	79311281	79311304	(22679885)	+	(TGC)n	Simple_repeat	1	24	(0)	1357653
13	15.8	0.0	7.3	chr15	79923094	79923134	(22068055)	+	(CCGCC)n	Simple_repeat	1	41	(0)	1358601
12	16.8	6.3	8.3	chr15	80059481	80059559	(21931630)	+	(TCCGGCC)n	Simple_repeat	1	84	(0)	1358903
327	28.1	3.8	3.8	chr15	80418872	80419004	(21572185)	C	L2a	LINE/L2	(0)	3426	3294	1359503
594	18.3	7.8	5.6	chr15	80419119	80419280	(21571909)	C	MER5A	DNA/hAT-Charlie	(0)	189	24	1359504
415	30.4	9.0	1.0	chr15	81608147	81608328	(20382861)	+	MIRb	SINE/MIR	26	228	(40)	1361533
213	32.5	14.5	2.0	chr15	81608331	81608528	(20382661)	C	L2c	LINE/L2	(1218)	2201	1975	1361528
84	20.4	2.4	2.3	chr15	81608530	81608741	(20382448)	+	(TTTC)n	Simple_repeat	1	217	(0)	1361534
1835	28.8	7.8	4.9	chr15	82066208	82066775	(19924414)	C	MER115	DNA/hAT-Tip100	(99)	594	2	1362283
232	14.3	0.0	0.0	chr15	82066786	82066820	(19924369)	+	MER57A1	LTR/ERV1	1	35	(397)	1362285
226	9.1	0.0	0.0	chr15	82066827	82066859	(19924330)	C	MER57A1	LTR/ERV1	(370)	62	30	1362286
1907	14.8	1.0	2.3	chr15	82747521	82747823	(19243366)	+	AluJb	SINE/Alu	1	299	(13)	1363374
7705	13.9	1.8	9.8	chr15	82747824	82749087	(19242102)	+	L1MCa	LINE/L1	2549	3806	(2515)	1363363
361	28.6	13.0	0.0	chr15	82806377	82806530	(19184659)	+	Charlie24	DNA/hAT-Charlie	2273	2449	(1)	1363488
20	24.8	2.7	2.6	chr15	82810046	82810077	(19181112)	+	(GGCTGG)n	Simple_repeat	1	60	(17)	1363497
13	6.5	5.6	5.3	chr15	82810078	82810113	(19181076)	+	G-rich	Low_complexity	1	38	(0)	1363498
20	24.8	2.7	2.6	chr15	82810114	82810120	(19181069)	+	(GGCTGG)n	Simple_repeat	61	77	(0)	1363497
26	0.0	0.0	0.0	chr15	83207683	83207707	(18783482)	+	(CCG)n	Simple_repeat	1	25	(0)	1364239
8406	13.8	3.4	0.5	chr15	83933309	83934598	(18056591)	+	THE1D-int	LTR/ERVL-MaLR	291	1619	(12)	1365384
16	17.4	4.3	2.0	chr15	84748212	84748258	(17242931)	+	G-rich	Low_complexity	1	49	(0)	1366585
2281	15.8	3.1	0.5	chr15	88661870	88662301	(13328888)	+	L1MD1	LINE/L1	5559	6002	(240)	1372781
1300	27.6	4.3	5.4	chr15	88662321	88662951	(13328238)	+	HAL1	LINE/L1	559	1182	(1325)	1372782
2347	10.9	0.3	0.0	chr15	89206364	89206674	(12784515)	+	AluSp	SINE/Alu	2	313	(0)	1373823
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
2405	5.9	2.7	0.3	chr15	89689849	89690138	(12301051)	+	AluSx	SINE/Alu	1	297	(15)	1374684
11	27.8	0.0	2.2	chr15	89912555	89912599	(12078590)	+	G-rich	Low_complexity	1	45	(0)	1375132
242	22.2	3.6	0.0	chr15	89913142	89913195	(12077994)	C	L4_A_Mam	LINE/RTE-X	(929)	4061	4006	1375133
1489	17.1	5.2	9.7	chr15	89983467	89983746	(12007443)	+	MER57A-int	LTR/ERV1	1105	1381	(5258)	1375336
1352	18.5	9.6	2.5	chr15	89983747	89984027	(12007162)	C	AluJo	SINE/Alu	(9)	303	1	1375337
1489	17.1	5.2	9.7	chr15	89984028	89984148	(12007041)	+	MER57A-int	LTR/ERV1	1382	1487	(5152)	1375336
223	19.9	9.2	0.0	chr15	90210560	90210646	(11780543)	+	MIR	SINE/MIR	137	236	(32)	1375903
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
13	23.3	0.0	2.4	chr15	92655438	92655479	(9335710)	+	(GCCGCT)n	Simple_repeat	1	42	(0)	1380169
24	26.7	3.1	2.0	chr15	92882610	92882706	(9108483)	+	(GCGGCGG)n	Simple_repeat	1	100	(0)	1380695
16	20.8	2.3	0.0	chr15	92882778	92882821	(9108368)	+	GA-rich	Low_complexity	1	45	(0)	1380696
13	14.2	0.0	5.7	chr15	92883099	92883133	(9108056)	+	G-rich	Low_complexity	1	35	(0)	1380697
18	4.7	0.0	0.0	chr15	92900204	92900225	(9090964)	+	(TC)n	Simple_repeat	1	22	(0)	1380713
2206	12.4	0.0	0.3	chr15	97077135	97077441	(4913748)	C	AluSz6	SINE/Alu	(6)	306	1	1386766
555	30.4	5.2	1.5	chr15	97077442	97077601	(4913588)	+	L2a	LINE/L2	3253	3422	(4)	1386765
1162	19.6	5.7	2.1	chr15	97338647	97338881	(4652308)	C	MER21B	LTR/ERVL	(624)	244	1	1387068
2291	6.7	0.3	1.4	chr15	98701325	98701638	(3289551)	C	AluY	SINE/Alu	(0)	311	1	1389068
297	29.9	10.7	2.5	chr15	98701889	98702008	(3289181)	C	MIRc	SINE/MIR	(66)	202	72	1389069
19	0.0	0.0	0.0	chr15	98702034	98702054	(3289135)	+	(T)n	Simple_repeat	1	21	(0)	1389070
15	16.8	0.0	2.8	chr15	99015203	99015238	(2975951)	+	(GCCTCG)n	Simple_repeat	1	36	(0)	1389443
2229	9.0	3.3	0.0	chr15	99063783	99064071	(2927118)	C	AluSq2	SINE/Alu	(13)	300	2	1389552
649	31.7	11.5	1.5	chr15	99064414	99064804	(2926385)	C	LTR78	LTR/ERV1	(776)	528	94	1389551
35	6.8	0.0	0.0	chr15	99733363	99733408	(2257781)	+	(CCGCGAC)n	Simple_repeat	1	46	(0)	1390511
16	0.0	0.0	11.4	chr15	99733556	99733590	(2257599)	+	(CGGGG)n	Simple_repeat	1	35	(0)	1390512
2338	15.9	5.8	4.8	chr15	100063955	100064416	(1926773)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1390979
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
26	0.0	0.0	0.0	chr15	101724604	101724628	(266561)	+	(GGGGC)n	Simple_repeat	1	25	(0)	1393181
40	5.5	3.5	0.0	chr16	10001	10057	(90328288)	+	(TAACCC)n	Simple_repeat	1	59	(0)	1394055
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
1937	7.0	13.1	0.4	chr16	402163	402434	(89935911)	C	AluSx	SINE/Alu	(0)	312	1	1394695
973	26.3	12.7	1.3	chr16	472741	473136	(89865209)	+	MLT1C	LTR/ERVL-MaLR	8	455	(12)	1394851
2221	10.2	0.0	0.0	chr16	508906	509190	(89829155)	C	AluSx1	SINE/Alu	(14)	298	14	1394914
363	33.3	10.6	4.9	chr16	509191	509524	(89828821)	C	HAL1	LINE/L1	(1400)	1107	751	1394911
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
230	27.1	13.4	0.8	chr16	1072058	1072187	(89266158)	+	MER5A	DNA/hAT-Charlie	37	185	(4)	1395471
198	25.0	6.4	7.4	chr16	1092180	1092274	(89246071)	+	L2b	LINE/L2	3263	3356	(19)	1395493
13	24.4	2.2	8.6	chr16	1678512	1678602	(88659743)	+	(GCCGAG)n	Simple_repeat	1	93	(0)	1396237
13	20.3	3.6	5.2	chr16	1678843	1678898	(88659447)	+	(GTGGCC)n	Simple_repeat	1	58	(0)	1396238
1917	15.9	1.0	0.3	chr16	2013181	2013476	(88324869)	+	7SLRNA	srpRNA	2	299	(21)	1396780
389	17.4	2.0	7.5	chr16	2013485	2013590	(88324755)	C	MLT1D	LTR/ERVL-MaLR	(527)	100	1	1396776
17738	25.1	1.3	2.1	chr16	2661288	2668373	(87669972)	C	HERVK13-int	LTR/ERVK	(0)	8116	963	1397751
205	26.3	10.8	3.9	chr16	2778202	2778304	(87560041)	+	MIRc	SINE/MIR	61	171	(97)	1397908
2405	2.9	0.4	0.4	chr16	3045063	3045381	(87292964)	+	AluY	SINE/Alu	1	311	(0)	1398399
1245	24.0	4.2	3.9	chr16	3045382	3045596	(87292749)	+	MLT1B	LTR/ERVL-MaLR	170	382	(8)	1398398
2408	7.4	0.0	0.0	chr16	3107000	3107297	(87231048)	C	AluSg	SINE/Alu	(7)	303	6	1398514
417	13.4	0.0	1.5	chr16	3152162	3152228	(87186117)	C	AluJo	SINE/Alu	(185)	127	62	1398601
204	27.6	11.5	4.7	chr16	3283093	3283221	(87055124)	+	MER5B	DNA/hAT-Charlie	30	168	(10)	1398902
495	20.8	15.9	0.6	chr16	3501279	3501438	(86836907)	+	MER3	DNA/hAT-Charlie	20	208	(1)	1399287
220	29.1	6.6	2.3	chr16	3611935	3612064	(86726281)	C	L2b	LINE/L2	(160)	3215	3080	1399485
2338	9.3	0.0	0.0	chr16	3612248	3612549	(86725796)	C	AluSq	SINE/Alu	(10)	303	2	1399486
376	13.5	0.0	0.0	chr16	3862406	3862457	(86475888)	C	AluYj4	SINE/Alu	(37)	274	223	1399938
3872	5.7	4.1	3.2	chr16	4330781	4330971	(86007374)	+	MER9a3	LTR/ERVK	1	179	(333)	1400958
2483	8.2	0.3	0.0	chr16	4477218	4477523	(85860822)	+	AluSz	SINE/Alu	1	307	(5)	1401227
2406	9.4	0.3	0.0	chr16	4530368	4530675	(85807670)	+	AluSz	SINE/Alu	1	309	(3)	1401322
890	20.6	1.9	0.0	chr16	4530695	4530854	(85807491)	+	AluJo	SINE/Alu	137	299	(13)	1401323
260	5.9	0.0	0.0	chr16	4530872	4530905	(85807440)	C	MADE1	DNA/TcMar-Mariner	(0)	80	47	1401324
2081	8.1	0.0	0.0	chr16	4531070	4531327	(85807018)	C	AluY	SINE/Alu	(53)	258	1	1401325
2288	10.4	0.3	0.0	chr16	4579612	4579910	(85758435)	C	AluSx1	SINE/Alu	(12)	300	1	1401453
12	0.0	0.0	14.7	chr16	4625103	4625136	(85713209)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1401554
612	15.8	0.0	7.9	chr16	4927906	4928019	(85410326)	+	AluJr	SINE/Alu	92	196	(116)	1402156
266	19.5	0.0	0.0	chr16	4928020	4928060	(85410285)	C	AluJr	SINE/Alu	(77)	235	195	1402157
974	17.6	24.6	0.0	chr16	4928148	4928368	(85409977)	C	AluSg	SINE/Alu	(17)	293	1	1402158
21	12.2	2.1	4.1	chr16	5071862	5071909	(85266436)	+	(TGC)n	Simple_repeat	1	49	(0)	1402509
671	27.5	8.8	8.0	chr16	8623328	8623668	(81714677)	C	Tigger18a	DNA/TcMar-Tigger	(283)	569	231	1409450
439	30.0	18.6	0.0	chr16	8623987	8624166	(81714179)	C	MIRb	SINE/MIR	(16)	252	32	1409452
193	23.8	7.3	1.6	chr16	9297780	9297843	(81040502)	+	MER5A	DNA/hAT-Charlie	36	103	(86)	1411067
189	28.9	1.2	4.6	chr16	9343596	9343682	(80994663)	+	L2b	LINE/L2	3288	3371	(4)	1411163
365	27.6	13.2	0.9	chr16	9343727	9343938	(80994407)	C	MIR	SINE/MIR	(16)	246	5	1411164
12	10.0	0.0	0.0	chr16	11202879	11202900	(79135445)	+	(CATC)n	Simple_repeat	1	22	(0)	1415099
2267	7.6	0.7	0.0	chr16	11741752	11742041	(78596304)	+	AluSx	SINE/Alu	1	292	(20)	1416394
186	14.7	0.0	0.0	chr16	14286571	14286604	(76051741)	+	MIRc	SINE/MIR	115	148	(120)	1421773
632	19.3	6.9	1.7	chr16	14286994	14287172	(76051173)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1421774
1381	14.5	6.6	5.6	chr16	19087031	19087188	(71251157)	C	AluJr	SINE/Alu	(8)	304	135	1432653
12	13.7	0.0	0.0	chr16	19521893	19521916	(70816429)	+	(CAG)n	Simple_repeat	1	24	(0)	1433766
1435	16.3	0.8	7.0	chr16	20974451	20974720	(69363625)	C	AluJr	SINE/Alu	(59)	253	1	1436852
14	4.5	4.3	0.0	chr16	20974819	20974841	(69363504)	+	(TTA)n	Simple_repeat	1	24	(0)	1436853
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
14	25.3	1.6	4.8	chr16	21599902	21599963	(68738382)	+	G-rich	Low_complexity	1	63	(0)	1438247
2190	9.4	1.9	0.4	chr16	21708091	21708463	(68629882)	C	MER1A	DNA/hAT-Charlie	(112)	417	1	1438460
528	19.2	4.6	2.3	chr16	21708464	21708591	(68629754)	C	MER5A	DNA/hAT-Charlie	(58)	131	1	1438459
246	8.3	2.7	0.0	chr16	21708592	21708627	(68629718)	C	MIR3	SINE/MIR	(51)	157	121	1438464
1498	18.6	1.6	1.0	chr16	22234557	22234870	(68103475)	C	L1MB8	LINE/L1	(2)	6176	5861	1439609
1080	10.9	1.3	0.0	chr16	22234878	22235024	(68103321)	C	AluSx	SINE/Alu	(7)	305	157	1439610
1500	12.4	0.0	0.0	chr16	22235025	22235225	(68103120)	+	AluSx3	SINE/Alu	93	293	(18)	1439611
46	5.7	0.0	0.0	chr16	24729669	24729723	(65608622)	+	(GCG)n	Simple_repeat	1	55	(0)	1445420
17	21.6	1.8	3.5	chr16	24730022	24730078	(65608267)	+	(GCCGC)n	Simple_repeat	1	58	(0)	1445421
12	7.8	7.4	0.0	chr16	24730119	24730145	(65608200)	+	(CCCCT)n	Simple_repeat	1	29	(0)	1445422
299	33.5	3.9	4.9	chr16	24781599	24781827	(65556518)	+	L2	LINE/L2	2400	2634	(785)	1445517
2538	5.1	0.7	0.0	chr16	24781828	24782121	(65556224)	C	AluY	SINE/Alu	(15)	296	1	1445518
358	17.4	12.2	1.1	chr16	25066638	25066724	(65271621)	+	LTR53-int	LTR/ERVL	1379	1476	(1853)	1446146
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
197	19.2	3.7	7.1	chr16	25258549	25258604	(65079741)	C	L2a	LINE/L2	(24)	3402	3349	1446591
195	11.1	12.2	0.0	chr16	27268509	27268544	(63069801)	+	MIR3	SINE/MIR	109	149	(59)	1450722
507	28.1	3.9	5.9	chr16	28049117	28049221	(62289124)	+	L1M6	LINE/L1	3480	3577	(2823)	1452545
40	0.0	4.1	2.0	chr16	28049222	28049270	(62289075)	+	(TTTAAATTCCT)n	Simple_repeat	1	51	(0)	1452561
533	28.7	13.7	1.0	chr16	28210879	28211099	(62127246)	+	MIR	SINE/MIR	16	267	(1)	1452864
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
23	13.8	2.0	2.0	chr16	28974279	28974328	(61364017)	+	(TCCA)n	Simple_repeat	1	51	(0)	1454897
27	6.1	0.0	0.0	chr16	28974342	28974376	(61363969)	+	(TCCA)n	Simple_repeat	1	35	(0)	1454897
1972	19.5	10.4	4.9	chr16	29928021	29928300	(60410045)	+	MER90a	LTR/ERV1	291	610	(4)	1456882
2124	9.5	1.0	0.0	chr16	29928509	29928793	(60409552)	C	AluSp	SINE/Alu	(25)	288	1	1456884
1608	16.7	0.4	1.4	chr16	30165443	30165718	(60172627)	+	AluJr	SINE/Alu	6	278	(34)	1457440
287	35.0	8.6	7.6	chr16	30165719	30165977	(60172368)	C	L2	LINE/L2	(1161)	2258	1986	1457439
2250	8.4	0.7	0.0	chr16	30165978	30166274	(60172071)	C	AluSx	SINE/Alu	(12)	300	2	1457441
904	15.4	0.0	0.0	chr16	30385845	30385974	(59952371)	+	AluJr	SINE/Alu	2	131	(181)	1457897
1935	16.1	0.0	1.0	chr16	30386002	30386293	(59952052)	+	AluJr	SINE/Alu	9	297	(15)	1457898
11	19.2	9.1	1.7	chr16	30400368	30400422	(59937923)	+	(CCCGGACA)n	Simple_repeat	1	60	(0)	1457932
301	27.2	22.4	5.9	chr16	30441883	30442089	(59896256)	C	HAL1	LINE/L1	(1414)	1093	806	1458038
2193	11.7	0.3	0.3	chr16	30442098	30442395	(59895950)	+	AluSz	SINE/Alu	2	299	(13)	1458048
15	7.0	2.9	5.7	chr16	30527310	30527343	(59811002)	+	(CTC)n	Simple_repeat	1	35	(0)	1458286
615	2.9	0.0	0.0	chr16	30590174	30590243	(59748102)	+	AluSq10	SINE/Alu	2	71	(242)	1458413
905	13.3	4.9	0.0	chr16	30590276	30590410	(59747935)	+	AluSp	SINE/Alu	157	298	(15)	1458414
1839	13.4	0.3	0.3	chr16	30590413	30590704	(59747641)	+	Tigger2	DNA/TcMar-Tigger	1219	1510	(1208)	1458415
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
566	22.4	6.6	2.5	chr16	31071893	31072052	(59266293)	+	MLT1B	LTR/ERVL-MaLR	3	169	(221)	1459559
193	32.0	15.9	2.2	chr16	31072717	31072895	(59265450)	+	L2c	LINE/L2	2911	3118	(269)	1459560
1874	21.5	6.6	1.3	chr16	31874324	31874780	(58463565)	C	MER57E3	LTR/ERV1	(4)	483	1	1460888
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
235	34.5	9.0	5.0	chr16	46907259	46907810	(43430535)	C	L2c	LINE/L2	(38)	3349	2788	1466298
1413	26.3	11.8	7.7	chr16	47129902	47130692	(43207653)	+	HAL1	LINE/L1	283	1116	(1391)	1466761
711	24.8	8.0	4.2	chr16	47130693	47130907	(43207438)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	1466762
260	21.7	9.9	6.9	chr16	47143451	47143941	(43194404)	+	LTR12C	LTR/ERV1	122	628	(951)	1466777
22	15.1	1.8	3.6	chr16	47143991	47144079	(43194266)	+	(CCCGC)n	Simple_repeat	1	87	(0)	1466778
13	0.0	4.3	4.2	chr16	48244640	48244662	(42093683)	+	(GCG)n	Simple_repeat	1	24	(0)	1468423
17	21.5	3.6	1.7	chr16	52546724	52546779	(37791566)	+	G-rich	Low_complexity	1	58	(0)	1476159
10320	11.8	3.5	0.7	chr16	53185074	53186608	(37151737)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1477431
32	3.0	0.0	0.0	chr16	54928377	54928410	(35409935)	+	(GGGGCG)n	Simple_repeat	1	34	(0)	1480394
23	10.8	2.5	0.0	chr16	55479278	55479317	(34859028)	+	(GCG)n	Simple_repeat	1	41	(0)	1481504
1174	29.6	2.7	0.0	chr16	56569217	56569578	(33768767)	+	LTR16C	LTR/ERVL	69	440	(49)	1483312
310	28.2	3.5	3.5	chr16	57649436	57649549	(32688796)	C	L2c	LINE/L2	(188)	3199	3086	1485495
349	29.1	3.1	0.5	chr16	57863585	57863694	(32474651)	+	MIR3	SINE/MIR	87	194	(14)	1485924
11	10.2	2.7	7.9	chr16	58629552	58629588	(31708757)	+	(GTCCCC)n	Simple_repeat	1	38	(0)	1487476
25	26.8	2.2	5.8	chr16	66696773	66696906	(23641439)	+	(GGCGG)n	Simple_repeat	1	137	(0)	1500229
54	0.0	0.0	0.0	chr16	66867872	66867917	(23470428)	+	(AC)n	Simple_repeat	1	46	(0)	1500581
466	31.6	13.7	0.5	chr16	66879815	66880202	(23458143)	C	L2	LINE/L2	(620)	2799	2353	1500613
16	17.4	0.0	4.7	chr16	67842337	67842379	(22495966)	+	(GCGG)n	Simple_repeat	1	43	(0)	1502467
12	27.1	0.0	3.9	chr16	68264971	68265022	(22073323)	+	(TGTGAC)n	Simple_repeat	1	52	(0)	1503254
13	8.4	10.0	2.3	chr16	68265179	68265218	(22073127)	+	(TGGAGCGC)n	Simple_repeat	1	44	(0)	1503255
14	14.4	5.0	2.4	chr16	68520940	68520979	(21817366)	+	(CAGGCC)n	Simple_repeat	1	42	(0)	1503687
258	27.6	12.5	0.0	chr16	68521099	68521196	(21817149)	C	MIR3	SINE/MIR	(44)	164	53	1503688
1783	18.0	0.0	0.7	chr16	68674451	68674745	(21663600)	+	AluJo	SINE/Alu	1	293	(19)	1504038
13	23.7	0.0	4.2	chr16	68707827	68707874	(21630471)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1504115
17	8.9	5.3	2.5	chr16	69311879	69311920	(21026425)	+	(CTCCT)n	Simple_repeat	1	43	(0)	1505549
630	23.3	6.3	4.9	chr16	69312133	69312335	(21026010)	+	MIRb	SINE/MIR	54	259	(9)	1505550
1630	10.2	3.2	2.1	chr16	69595175	69595369	(20742976)	C	Tigger7	DNA/TcMar-Tigger	(170)	2321	2122	1506164
3567	15.4	1.4	2.2	chr16	69595485	69596126	(20742219)	C	Tigger7	DNA/TcMar-Tigger	(1854)	637	1	1506168
16	17.3	8.1	3.0	chr16	70251620	70251681	(20086664)	+	(CCG)n	Simple_repeat	1	67	(0)	1507543
1717	24.8	12.1	2.6	chr16	71917668	71918347	(18419998)	C	HAL1	LINE/L1	(1327)	1180	428	1510640
43	4.8	0.0	6.7	chr16	73058654	73058728	(17279617)	+	(GCG)n	Simple_repeat	1	75	(0)	1512337
1708	16.9	2.0	2.3	chr16	74549832	74550138	(15788207)	+	AluJb	SINE/Alu	1	306	(6)	1514897
195	23.6	16.3	0.7	chr16	74795759	74795903	(15542442)	C	L2a	LINE/L2	(45)	3381	3210	1515469
6645	20.2	12.9	5.9	chr16	74795906	74797266	(15541079)	+	L1MEc	LINE/L1	33	1505	(4895)	1515470
1740	21.5	4.5	5.6	chr16	77748017	77748483	(12589862)	+	MLT1C	LTR/ERVL-MaLR	1	462	(5)	1520407
16	5.3	0.0	0.0	chr16	78168432	78168451	(12169894)	+	(T)n	Simple_repeat	1	20	(0)	1521252
289	31.9	2.7	1.4	chr16	78168453	78168598	(12169747)	C	MIRb	SINE/MIR	(119)	149	2	1521253
37	22.4	0.0	0.0	chr16	78585636	78585713	(11752632)	+	(T)n	Simple_repeat	1	78	(0)	1521984
1132	16.5	10.7	9.5	chr16	78585921	78586205	(11752140)	+	AluJo	SINE/Alu	7	295	(17)	1521985
15083	13.2	1.8	3.0	chr16	79117309	79118608	(11219737)	C	Tigger1	DNA/TcMar-Tigger	(1095)	1323	3	1522990
1161	30.9	7.1	2.6	chr16	79118642	79119246	(11219099)	C	L1ME4a	LINE/L1	(59)	6065	5432	1522992
184	28.9	6.7	3.5	chr16	79172205	79172290	(11166055)	+	L2c	LINE/L2	3264	3352	(35)	1523076
16	25.7	0.0	0.0	chr16	79600073	79600118	(10738227)	+	(CCCC)n	Simple_repeat	1	46	(0)	1523836
13	19.7	4.0	3.9	chr16	79600134	79600183	(10738162)	+	(GCTC)n	Simple_repeat	1	52	(0)	1523837
17	15.9	0.0	2.7	chr16	79600218	79600254	(10738091)	+	(GCG)n	Simple_repeat	1	37	(0)	1523838
234	29.4	0.0	0.0	chr16	83807427	83807494	(6530851)	+	L1M5	LINE/L1	5862	5929	(250)	1531628
19	11.1	5.1	0.0	chr16	83898986	83899024	(6439321)	+	(CCGCC)n	Simple_repeat	1	41	(0)	1531816
13	17.6	2.4	4.7	chr16	83899074	83899115	(6439230)	+	(CGG)n	Simple_repeat	1	43	(0)	1531817
11	24.4	4.0	1.9	chr16	83899201	83899250	(6439095)	+	(CCGGCGG)n	Simple_repeat	1	52	(0)	1531818
901	22.0	3.2	4.0	chr16	84549523	84549745	(5788600)	+	L1MB5	LINE/L1	5954	6174	(0)	1533046
833	13.4	1.6	0.8	chr16	84549869	84549995	(5788350)	C	AluJr	SINE/Alu	(176)	136	9	1533047
14	22.7	4.3	0.0	chr16	84648785	84648830	(5689515)	+	G-rich	Low_complexity	1	48	(0)	1533298
370	31.2	4.3	0.0	chr16	84691563	84691716	(5646629)	+	MamRep137	DNA/TcMar-Tigger	219	379	(131)	1533400
850	27.2	3.3	1.5	chr16	84691721	84691989	(5646356)	+	MLT1C	LTR/ERVL-MaLR	187	460	(7)	1533401
608	32.2	12.8	4.9	chr16	85003874	85004624	(5333721)	+	L2c	LINE/L2	2152	2970	(449)	1533993
181	25.8	7.0	4.3	chr16	85004654	85004722	(5333623)	+	L2c	LINE/L2	3317	3387	(0)	1533993
285	19.6	0.0	0.0	chr16	85066701	85066751	(5271594)	C	L2c	LINE/L2	(1)	3386	3336	1534129
12	15.7	2.6	5.0	chr16	85208463	85208501	(5129844)	+	(CCTGACT)n	Simple_repeat	1	40	(0)	1534391
528	19.1	8.1	5.8	chr16	85208573	85208728	(5129617)	C	MER58C	DNA/hAT-Charlie	(0)	215	56	1534392
235	31.6	3.4	0.9	chr16	85245239	85245353	(5092992)	C	MER113	DNA/hAT-Charlie	(251)	270	153	1534482
50	33.5	1.8	1.3	chr16	85245870	85246089	(5092256)	+	(TG)n	Simple_repeat	1	224	(0)	1534483
15	18.6	0.0	8.6	chr16	85689135	85689192	(4649153)	+	(CCGGC)n	Simple_repeat	1	58	(0)	1535214
791	18.6	0.0	0.0	chr16	85689385	85689508	(4648837)	C	AluJr	SINE/Alu	(188)	124	1	1535215
309	36.4	10.9	0.0	chr16	87185400	87185586	(3152759)	+	MIRb	SINE/MIR	32	241	(27)	1537968
230	30.5	5.5	0.0	chr16	87185616	87185769	(3152576)	+	L1ME4a	LINE/L1	5946	6108	(16)	1537969
238	25.0	6.1	7.7	chr16	87316590	87316706	(3021639)	+	MLT1K	LTR/ERVL-MaLR	25	139	(456)	1538229
783	26.2	10.3	2.0	chr16	87316714	87317005	(3021340)	+	MLT1K	LTR/ERVL-MaLR	271	589	(6)	1538229
11	10.6	0.0	10.5	chr16	87317335	87317372	(3020973)	+	(AACCC)n	Simple_repeat	1	38	(0)	1538230
13	4.7	0.0	4.2	chr16	87317392	87317415	(3020930)	+	(CGCC)n	Simple_repeat	1	24	(0)	1538231
17	9.1	0.0	0.0	chr16	87317814	87317837	(3020508)	+	(T)n	Simple_repeat	1	24	(0)	1538232
349	28.2	14.6	3.6	chr16	87896052	87896246	(2442099)	C	MIRb	SINE/MIR	(41)	227	8	1539263
275	24.0	7.4	0.0	chr16	88887974	88888048	(1450297)	+	MIRc	SINE/MIR	67	147	(121)	1540555
678	12.0	16.3	1.6	chr17	409699	409823	(82847618)	+	AluJo	SINE/Alu	1	147	(165)	1545159
15	18.1	0.0	0.0	chr17	410591	410622	(82846819)	+	GA-rich	Low_complexity	1	32	(0)	1545160
13	14.9	3.2	0.0	chr17	732533	732563	(82524878)	+	(GGCGGA)n	Simple_repeat	1	32	(0)	1545706
17	21.8	4.5	2.9	chr17	732578	732644	(82524797)	+	(GCCGA)n	Simple_repeat	1	70	(0)	1545707
12	0.0	3.7	7.1	chr17	732934	732960	(82524481)	+	(GGCGG)n	Simple_repeat	1	28	(0)	1545708
24	15.8	1.2	9.3	chr17	1179992	1180076	(82077365)	+	G-rich	Low_complexity	1	86	(0)	1546513
2336	9.9	0.0	0.3	chr17	1490216	1490527	(81766914)	+	AluSc8	SINE/Alu	1	311	(0)	1547241
227	26.6	18.6	0.0	chr17	1490874	1491016	(81766425)	+	L2c	LINE/L2	3028	3198	(177)	1547242
265	24.3	3.2	0.9	chr17	2402284	2402383	(80855058)	C	MIR3	SINE/MIR	(89)	173	80	1549026
2181	11.8	0.3	0.0	chr17	2484496	2484791	(80772650)	C	AluSq2	SINE/Alu	(14)	299	3	1549206
3187	12.7	4.5	1.8	chr17	2484986	2485499	(80771942)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1549207
2301	9.0	0.0	3.1	chr17	2725091	2725411	(80532030)	+	AluSx1	SINE/Alu	1	311	(1)	1549783
15	11.3	7.9	0.0	chr17	2853230	2853267	(80404174)	+	G-rich	Low_complexity	1	41	(0)	1550108
1196	25.8	4.6	0.3	chr17	3009941	3010059	(80247382)	C	ORSL-2a	DNA/hAT-Tip100	(11)	331	206	1550434
2186	25.9	11.6	3.8	chr17	4622276	4623469	(78633972)	C	HAL1	LINE/L1	(439)	2068	769	1553415
1519	12.8	0.0	2.1	chr17	4732080	4732141	(78525300)	+	AluSx1	SINE/Alu	75	136	(176)	1553637
2231	7.5	1.0	0.0	chr17	4732142	4732433	(78525008)	+	AluSx1	SINE/Alu	1	295	(17)	1553638
2110	10.8	0.0	1.4	chr17	5197188	5197500	(78059941)	C	AluSp	SINE/Alu	(0)	313	1	1554591
11	18.8	8.0	1.9	chr17	5438851	5438900	(77818541)	+	(GCAGGC)n	Simple_repeat	1	54	(0)	1555141
236	27.3	3.5	9.3	chr17	5501429	5501610	(77755831)	C	L1ME4a	LINE/L1	(17)	6107	5937	1555257
837	26.6	7.6	0.8	chr17	5540019	5540385	(77717056)	+	L1ME4b	LINE/L1	341	734	(158)	1555347
499	27.7	6.1	0.5	chr17	5540526	5540681	(77716760)	+	MIRb	SINE/MIR	2	162	(106)	1555348
766	28.4	6.6	9.3	chr17	6161943	6162458	(77094983)	C	LTR85a	LTR/Gypsy?	(0)	702	202	1556509
12	14.8	0.0	3.0	chr17	7885281	7885307	(75372134)	+	(CCTCC)n	Simple_repeat	1	26	(0)	1559701
42	0.0	0.0	0.0	chr17	7885308	7885345	(75372096)	+	(CCG)n	Simple_repeat	1	38	(0)	1559702
13	5.3	0.0	0.0	chr17	7885411	7885430	(75372011)	+	(GGA)n	Simple_repeat	1	20	(0)	1559703
1400	25.1	12.2	3.9	chr17	7994685	7996379	(75261062)	+	L1ME4b	LINE/L1	4	890	(2)	1559908
299	23.7	9.7	0.0	chr17	8162499	8162591	(75094850)	+	MIR3	SINE/MIR	45	147	(61)	1560200
31	19.2	1.2	3.6	chr17	8163007	8163089	(75094352)	+	G-rich	Low_complexity	1	84	(0)	1560201
394	26.8	4.0	3.5	chr17	8401731	8401904	(74855537)	+	L3	LINE/CR1	3519	3693	(406)	1560744
228	25.9	11.0	1.2	chr17	8402065	8402146	(74855295)	C	MER5A	DNA/hAT-Charlie	(27)	162	72	1560745
358	25.9	5.6	6.0	chr17	13626571	13626804	(69630637)	C	MER112	DNA/hAT-Charlie	(28)	233	1	1570085
407	31.2	1.5	0.8	chr17	13626805	13626933	(69630508)	C	L2	LINE/L2	(2505)	914	785	1570076
225	15.0	0.0	0.0	chr17	13626970	13627009	(69630432)	C	MER3	DNA/hAT-Charlie	(14)	195	156	1570086
1314	22.3	9.5	3.2	chr17	13627011	13627533	(69629908)	C	L1ME1	LINE/L1	(3)	6176	5618	1570087
2084	11.6	2.7	0.0	chr17	14068933	14069216	(69188225)	C	AluJr	SINE/Alu	(20)	292	1	1570862
13	19.6	0.0	0.0	chr17	14301327	14301356	(68956085)	+	(GCC)n	Simple_repeat	1	30	(0)	1571199
18	7.9	0.0	0.0	chr17	14301576	14301602	(68955839)	+	(CCG)n	Simple_repeat	1	27	(0)	1571200
1267	12.7	21.7	0.4	chr17	16386331	16386566	(66870875)	+	AluSz6	SINE/Alu	3	302	(10)	1574868
1106	14.0	0.0	0.0	chr17	16386580	16386743	(66870698)	+	AluJr	SINE/Alu	139	302	(10)	1574869
1741	7.1	0.0	0.0	chr17	16536523	16536734	(66720707)	+	AluSx4	SINE/Alu	89	300	(10)	1575179
1085	21.2	3.8	0.0	chr17	16584038	16584315	(66673126)	+	L1M4	LINE/L1	3112	3400	(2746)	1575251
1057	9.0	0.0	0.0	chr17	16589595	16589727	(66667714)	C	AluSq10	SINE/Alu	(180)	133	1	1575259
4124	25.7	5.0	9.7	chr17	16589777	16590230	(66667211)	+	L1MB5	LINE/L1	2658	3123	(3023)	1575260
31	13.7	0.0	8.2	chr17	17496276	17496404	(65761037)	+	G-rich	Low_complexity	1	118	(0)	1576770
15	26.4	4.8	0.0	chr17	17496441	17496503	(65760938)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1576771
1003	27.2	7.0	4.1	chr17	17666479	17666965	(65590476)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	3	1577112
316	33.3	9.8	0.6	chr17	17692656	17692812	(65564629)	+	MIRb	SINE/MIR	21	193	(75)	1577177
194	30.4	6.1	4.2	chr17	17725213	17725308	(65532133)	+	MIR3	SINE/MIR	75	172	(36)	1577232
13	8.3	3.6	3.5	chr17	17725409	17725436	(65532005)	+	GA-rich	Low_complexity	1	29	(0)	1577233
13	11.6	0.0	6.2	chr17	17811075	17811106	(65446335)	+	(GTCC)n	Simple_repeat	1	32	(0)	1577391
614	25.2	13.1	1.8	chr17	17922534	17922755	(65334686)	+	MIR	SINE/MIR	1	251	(11)	1577578
2274	9.1	0.0	1.1	chr17	17923116	17923402	(65334039)	+	AluSq2	SINE/Alu	1	284	(29)	1577579
478	17.3	0.0	0.0	chr17	19992797	19992899	(63264542)	C	AluSx3	SINE/Alu	(0)	311	207	1581720
446	15.9	8.9	6.5	chr17	19992952	19993126	(63264315)	+	FRAM	SINE/Alu	6	296	(6)	1581721
1967	13.9	1.3	0.0	chr17	19993138	19993440	(63264001)	+	AluJo	SINE/Alu	6	312	(0)	1581722
262	27.8	9.1	0.0	chr17	21551017	21551106	(61706335)	C	Charlie16a	DNA/hAT-Charlie	(214)	128	30	1584442
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
2145	9.8	2.0	0.0	chr17	27472527	27472823	(55784618)	+	AluSx1	SINE/Alu	1	303	(9)	1586857
198	21.8	10.3	1.3	chr17	27654461	27654539	(55602902)	+	MIR3	SINE/MIR	64	150	(58)	1587206
512	27.8	4.9	0.6	chr17	27654920	27655093	(55602348)	C	MIR	SINE/MIR	(70)	192	11	1587207
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
227	27.3	2.4	18.8	chr17	29370698	29370768	(53886673)	+	L2c	LINE/L2	3264	3320	(67)	1590505
2361	8.7	0.0	0.7	chr17	29370769	29371066	(53886375)	C	AluYf1	SINE/Alu	(15)	296	1	1590506
29	0.0	0.0	0.0	chr17	30291955	30291981	(52965460)	+	(CGG)n	Simple_repeat	1	27	(0)	1592285
1871	10.6	0.0	4.4	chr17	30916480	30916753	(52340688)	C	AluSx	SINE/Alu	(2)	310	49	1593593
2058	12.8	0.7	0.0	chr17	30916757	30917038	(52340403)	+	AluSz6	SINE/Alu	16	299	(13)	1593594
181	31.8	5.7	1.5	chr17	31515759	31515825	(51741616)	+	AmnSINE1	SINE/5S-Deu-L2	452	521	(54)	1594737
2384	7.1	0.0	0.3	chr17	31936291	31936586	(51320855)	+	AluSx3	SINE/Alu	1	295	(16)	1595691
4476	2.8	0.0	0.0	chr17	32821864	32822401	(50435040)	+	L1PA5	LINE/L1	5482	6019	(135)	1597471
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
15	18.2	3.6	5.3	chr17	32877282	32877336	(50380105)	+	G-rich	Low_complexity	1	57	(0)	1597570
187	29.3	3.3	0.0	chr17	32877574	32877631	(50379810)	C	MIR	SINE/MIR	(0)	262	203	1597571
199	27.4	10.6	2.3	chr17	32877640	32877725	(50379716)	C	MIR	SINE/MIR	(155)	107	14	1597571
1984	16.2	0.0	1.6	chr17	35595262	35595569	(47661872)	+	AluJb	SINE/Alu	1	303	(9)	1602461
682	23.3	2.3	8.5	chr17	35595570	35595614	(47661827)	C	MER5B	DNA/hAT-Charlie	(133)	45	1	1602460
13	24.0	2.2	2.1	chr17	35795625	35795670	(47461771)	+	G-rich	Low_complexity	1	47	(0)	1602817
210	24.7	7.7	0.0	chr17	36148808	36148934	(47108507)	C	MIR3	SINE/MIR	(10)	252	112	1603463
471	29.2	10.1	1.7	chr17	36149225	36149405	(47108036)	C	MIRb	SINE/MIR	(70)	198	1	1603464
293	31.1	5.7	1.2	chr17	36658391	36658556	(46598885)	C	MIRb	SINE/MIR	(68)	200	27	1604356
1090	16.9	2.6	1.1	chr17	36658652	36658840	(46598601)	+	AluJb	SINE/Alu	104	295	(17)	1604357
14	28.6	0.0	0.0	chr17	37489978	37490024	(45767417)	+	G-rich	Low_complexity	1	47	(0)	1605976
1486	17.8	0.0	3.5	chr17	37849714	37849971	(45407470)	C	AluJo	SINE/Alu	(13)	299	51	1606674
3241	19.6	9.7	14.5	chr17	37850001	37850198	(45407243)	C	L1M4	LINE/L1	(743)	5403	5198	1606675
2088	10.5	4.4	0.0	chr17	38660813	38661097	(44596344)	C	AluSx	SINE/Alu	(14)	298	1	1608296
13	13.2	0.0	0.0	chr17	38702362	38702386	(44555055)	+	(CGG)n	Simple_repeat	1	25	(0)	1608405
13	10.4	6.5	0.0	chr17	38702408	38702438	(44555003)	+	G-rich	Low_complexity	1	33	(0)	1608406
19	21.9	4.2	2.7	chr17	38702481	38702552	(44554889)	+	G-rich	Low_complexity	1	75	(0)	1608406
416	30.3	8.4	0.7	chr17	38702582	38702734	(44554707)	C	MIRb	SINE/MIR	(19)	249	84	1608407
628	4.1	0.0	0.0	chr17	38869291	38869363	(44388078)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608779
725	10.8	1.0	0.0	chr17	39153382	39153483	(44103958)	C	AluJo	SINE/Alu	(15)	297	195	1609430
619	15.8	15.9	0.0	chr17	39153486	39153612	(44103829)	C	MER5A	DNA/hAT-Charlie	(38)	151	1	1609431
641	2.7	0.0	0.0	chr17	39153733	39153805	(44103636)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609432
15	10.7	4.3	6.2	chr17	40062829	40062874	(43194567)	+	(AGCCCG)n	Simple_repeat	1	48	(0)	1611288
2314	7.7	2.3	1.7	chr17	40114219	40114517	(43142924)	+	AluSx1	SINE/Alu	3	303	(9)	1611370
216	27.0	0.0	3.1	chr17	40307917	40307981	(42949460)	C	MIR1_Amn	SINE/MIR	(79)	151	89	1611812
18	0.0	0.0	0.0	chr17	41579348	41579367	(41678074)	+	(A)n	Simple_repeat	1	20	(0)	1613853
305	32.6	6.4	2.2	chr17	42019699	42019833	(41237608)	+	L2b	LINE/L2	3233	3373	(2)	1614783
1172	15.3	15.1	2.1	chr17	42555071	42555312	(40702129)	+	AluJo	SINE/Alu	2	280	(32)	1615881
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
17657	25.6	1.5	1.4	chr17	43325134	43331647	(39925794)	C	HERVK13-int	LTR/ERVK	(0)	8116	1070	1617608
720	27.4	9.1	0.0	chr17	43563540	43563858	(39693583)	+	L1ME5	LINE/L1	5539	5897	(297)	1618110
444	27.2	8.9	1.3	chr17	44124298	44124542	(39132899)	+	L1M5	LINE/L1	5558	5823	(301)	1619261
1817	12.4	0.0	3.5	chr17	44519886	44520053	(38737388)	+	AluJb	SINE/Alu	136	294	(18)	1620130
1194	29.2	9.0	5.1	chr17	44943408	44943695	(38313746)	C	L1M5	LINE/L1	(1908)	4238	3921	1621026
1822	17.4	0.7	3.5	chr17	44943696	44944011	(38313430)	C	AluJr	SINE/Alu	(0)	312	6	1621027
12	5.5	0.0	0.0	chr17	45248052	45248070	(38009371)	+	(GGA)n	Simple_repeat	1	19	(0)	1621666
13	20.0	2.4	2.3	chr17	45317001	45317042	(37940399)	+	(CCGCCGA)n	Simple_repeat	1	43	(0)	1621778
13	24.6	3.3	3.2	chr17	45317023	45317083	(37940358)	+	G-rich	Low_complexity	1	63	(0)	1621779
286	29.9	7.9	0.0	chr17	45326854	45326970	(37930471)	+	MER113	DNA/hAT-Charlie	5	131	(390)	1621803
2067	11.0	0.0	0.0	chr17	45327060	45327383	(37930058)	C	AluSx1	SINE/Alu	(0)	312	1	1621804
639	30.5	17.0	1.0	chr17	45377574	45378152	(37879289)	+	L2b	LINE/L2	698	1387	(2032)	1621931
335	34.0	6.6	4.2	chr17	45378390	45378653	(37878788)	+	L2b	LINE/L2	2797	3067	(352)	1621931
14	20.2	0.0	0.0	chr17	45783597	45783630	(37473811)	+	(ATGA)n	Simple_repeat	1	34	(0)	1622786
48	22.2	1.6	6.5	chr17	45784098	45784280	(37473161)	+	G-rich	Low_complexity	1	186	(0)	1622787
12	31.3	0.0	0.0	chr17	47324096	47324142	(35933299)	+	G-rich	Low_complexity	1	47	(0)	1625797
2427	8.3	0.7	0.3	chr17	47747354	47747654	(35509787)	C	AluSc8	SINE/Alu	(7)	304	3	1626654
636	23.3	0.8	8.4	chr17	47747655	47747736	(35509705)	C	HAL1b	LINE/L1	(378)	2043	1968	1626651
20	0.0	0.0	0.0	chr17	47747835	47747856	(35509585)	+	(T)n	Simple_repeat	1	22	(0)	1626655
24	18.7	3.9	3.7	chr17	47851041	47851118	(35406323)	+	(GGCGGCA)n	Simple_repeat	1	81	(0)	1626827
2085	10.9	3.7	0.0	chr17	47986005	47986288	(35271153)	+	AluSx4	SINE/Alu	1	295	(15)	1627062
11	24.6	0.0	2.5	chr17	48543837	48543876	(34713565)	+	(CCCCTC)n	Simple_repeat	1	40	(0)	1628077
24	14.8	0.0	0.0	chr17	48611613	48611651	(34645790)	+	(A)n	Simple_repeat	1	39	(0)	1628140
21	14.2	5.2	3.3	chr17	48611652	48611670	(34645771)	+	A-rich	Low_complexity	1	61	(0)	1628141
12	13.9	0.0	0.0	chr17	48618425	48618448	(34638993)	+	(ATT)n	Simple_repeat	1	24	(0)	1628153
694	15.9	0.8	7.7	chr17	48690645	48690787	(34566654)	C	L1MD1	LINE/L1	(123)	6510	6378	1628305
1123	17.3	0.0	0.5	chr17	48690810	48690994	(34566447)	C	AluJb	SINE/Alu	(0)	312	129	1628306
14	0.0	0.0	0.0	chr17	48690999	48691016	(34566425)	+	(ATT)n	Simple_repeat	1	18	(0)	1628307
19	16.2	8.6	3.4	chr17	49508139	49508219	(33749222)	+	(CAGGCAG)n	Simple_repeat	1	88	(0)	1630071
186	31.6	10.6	0.0	chr17	50478547	50478622	(32778819)	+	L2b	LINE/L2	3290	3374	(1)	1631862
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
187	28.9	3.8	7.3	chr17	50479170	50479251	(32778190)	+	MIRb	SINE/MIR	36	114	(154)	1631865
1838	10.8	4.5	5.4	chr17	50706619	50706932	(32550509)	+	AluJb	SINE/Alu	1	311	(1)	1632278
25	21.8	2.0	3.4	chr17	51120737	51120828	(32136613)	+	G-rich	Low_complexity	1	90	(0)	1633161
17	18.8	0.0	10.7	chr17	51120903	51120977	(32136464)	+	G-rich	Low_complexity	1	75	(0)	1633162
13	25.2	2.7	6.5	chr17	55421817	55421891	(27835550)	+	(GGTCG)n	Simple_repeat	1	77	(0)	1639592
28	16.9	4.7	3.4	chr17	55421919	55422003	(27835438)	+	(CCTCCCG)n	Simple_repeat	1	89	(0)	1639593
12	10.2	0.0	10.3	chr17	55422139	55422177	(27835264)	+	G-rich	Low_complexity	1	39	(0)	1639594
18	14.9	0.0	2.6	chr17	56593716	56593754	(26663687)	+	(CGC)n	Simple_repeat	1	39	(0)	1641537
31	11.4	0.0	0.0	chr17	56665990	56666038	(26591403)	+	(AC)n	Simple_repeat	1	49	(0)	1641705
13	11.4	0.0	6.2	chr17	56914103	56914134	(26343307)	+	(GCGG)n	Simple_repeat	1	32	(0)	1642230
16	18.9	0.0	0.0	chr17	58005479	58005531	(25251910)	+	(GCTACG)n	Simple_repeat	1	53	(0)	1644248
483	22.5	7.0	11.9	chr17	58156549	58156722	(25100719)	C	MIRb	SINE/MIR	(61)	207	39	1644556
29	28.0	2.3	0.0	chr17	59534529	59534615	(23722826)	+	(AT)n	Simple_repeat	1	89	(0)	1647460
492	10.1	10.2	0.0	chr17	59534888	59534966	(23722475)	C	LTR23	LTR/ERV1	(0)	437	350	1647461
14	7.5	3.3	3.2	chr17	59535018	59535047	(23722394)	+	(TTTAA)n	Simple_repeat	1	31	(0)	1647462
2312	8.9	0.3	0.3	chr17	59535048	59535351	(23722090)	C	AluSp	SINE/Alu	(8)	305	2	1647463
14	16.9	2.3	4.4	chr17	60102666	60102709	(23154732)	+	(GGCCGCG)n	Simple_repeat	1	45	(0)	1648573
18	21.5	0.0	7.3	chr17	60102710	60102730	(23154711)	+	(GGC)n	Simple_repeat	4	68	(0)	1648574
353	24.5	7.8	7.8	chr17	60102889	60103003	(23154438)	+	L1M5	LINE/L1	5573	5687	(437)	1648575
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
7261	21.7	5.7	4.2	chr17	61116297	61117310	(22140131)	C	L1MDa	LINE/L1	(4261)	2372	1313	1650524
1759	18.0	0.3	1.0	chr17	61117311	61117599	(22139842)	+	AluJr	SINE/Alu	1	287	(25)	1650530
7261	21.7	5.7	4.2	chr17	61117600	61117697	(22139744)	C	L1MDa	LINE/L1	(5321)	1312	1255	1650524
981	13.9	4.3	6.7	chr17	61117698	61117890	(22139551)	C	L1MC1	LINE/L1	(17)	6316	6129	1650531
17	20.2	0.0	0.0	chr17	61337658	61337691	(21919750)	+	(T)n	Simple_repeat	1	34	(0)	1650904
2137	13.1	0.0	0.0	chr17	61493952	61494248	(21763193)	C	AluSx	SINE/Alu	(15)	297	1	1651136
261	23.2	6.7	7.7	chr17	61494249	61494299	(21763142)	+	Charlie7a	DNA/hAT-Charlie	224	270	(2)	1651135
285	30.9	4.3	4.3	chr17	61494480	61494594	(21762847)	+	MIRb	SINE/MIR	110	224	(44)	1651137
374	36.0	1.1	2.2	chr17	61495041	61495219	(21762222)	+	MIRc	SINE/MIR	61	237	(31)	1651138
4942	19.6	4.8	5.4	chr17	61652124	61653691	(21603750)	+	L1MCa	LINE/L1	9	1636	(5115)	1651394
28	22.5	1.5	8.2	chr17	62627530	62627662	(20629779)	+	(CCCCCT)n	Simple_repeat	1	135	(0)	1653391
15	5.6	0.0	0.0	chr17	62628029	62628047	(20629394)	+	(GT)n	Simple_repeat	1	19	(0)	1653392
13	16.0	2.7	2.6	chr17	62704029	62704065	(20553376)	+	G-rich	Low_complexity	1	38	(0)	1653549
19	24.2	1.2	6.0	chr17	62704155	62704236	(20553205)	+	(CGGAGG)n	Simple_repeat	1	83	(0)	1653550
2125	12.9	0.3	1.3	chr17	62855706	62856016	(20401425)	+	AluSx1	SINE/Alu	1	308	(4)	1653817
281	27.0	14.0	6.4	chr17	63566387	63566635	(19690806)	+	L1ME3G	LINE/L1	370	640	(284)	1654938
1464	16.8	6.8	4.4	chr17	63566648	63566921	(19690520)	+	AluJb	SINE/Alu	10	290	(22)	1654944
875	15.7	0.0	1.5	chr17	63566969	63567102	(19690339)	C	FLAM_C	SINE/Alu	(10)	133	2	1654945
377	22.1	6.8	1.9	chr17	64118182	64118288	(19139153)	C	MIR3	SINE/MIR	(41)	167	60	1655939
11	10.5	0.0	10.5	chr17	64262874	64262911	(18994530)	+	G-rich	Low_complexity	1	38	(0)	1656173
26	17.3	4.2	6.1	chr17	64263250	64263344	(18994097)	+	(GCC)n	Simple_repeat	1	99	(0)	1656174
27	11.5	5.2	1.6	chr17	64661886	64661943	(18595498)	+	(CGG)n	Simple_repeat	1	61	(0)	1657017
25	22.3	1.6	0.0	chr17	64662112	64662174	(18595267)	+	(GCC)n	Simple_repeat	1	64	(0)	1657018
30	7.0	2.9	7.0	chr17	64662354	64662422	(18595019)	+	G-rich	Low_complexity	1	71	(0)	1657019
15	28.8	1.9	6.5	chr17	64975604	64975708	(18281733)	+	(ACGCC)n	Simple_repeat	1	107	(0)	1657692
533	28.7	3.8	11.2	chr17	65099968	65100226	(18157215)	C	MIR	SINE/MIR	(15)	247	9	1657969
314	10.0	9.1	0.0	chr17	65100357	65100416	(18157025)	+	MADE1	DNA/TcMar-Mariner	1	66	(14)	1657970
50	23.1	0.8	0.8	chr17	65100533	65100655	(18156786)	+	(TCC)n	Simple_repeat	1	124	(0)	1657971
14	13.7	0.0	5.6	chr17	65100844	65100879	(18156562)	+	(CCCGC)n	Simple_repeat	1	36	(0)	1657972
434	27.6	2.9	2.9	chr17	67209658	67209795	(16047646)	+	MIRb	SINE/MIR	25	162	(106)	1661528
1627	17.1	0.0	3.3	chr17	67209934	67210207	(16047234)	+	AluJo	SINE/Alu	1	265	(47)	1661529
11	29.7	1.8	1.8	chr17	67272397	67272451	(15984990)	+	(CAGGAGC)n	Simple_repeat	1	56	(0)	1661656
1084	23.9	17.5	2.8	chr17	67492171	67492597	(15764844)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	1662163
1405	27.0	9.4	3.2	chr17	67492598	67493075	(15764366)	C	L1ME3A	LINE/L1	(105)	6068	5570	1662162
11398	9.5	1.4	2.5	chr17	71617952	71618794	(11638647)	+	THE1B-int	LTR/ERVL-MaLR	1	861	(719)	1669073
2118	2.4	0.0	1.2	chr17	71618795	71619048	(11638393)	+	L1PA3	LINE/L1	5905	6155	(0)	1669074
993	25.8	5.5	12.3	chr17	74410826	74411223	(8846218)	+	MLT1C	LTR/ERVL-MaLR	53	422	(45)	1674108
2109	11.9	0.0	1.1	chr17	74411233	74411558	(8845883)	C	AluSx1	SINE/Alu	(0)	312	6	1674109
442	26.6	4.3	1.9	chr17	74670851	74671007	(8586434)	C	Charlie4z	DNA/hAT-Charlie	(5)	162	2	1674599
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
18	15.8	2.3	2.2	chr17	76265361	76265404	(6992037)	+	(GGC)n	Simple_repeat	1	45	(0)	1677698
23	11.3	0.0	7.3	chr17	76265643	76265697	(6991744)	+	G-rich	Low_complexity	1	55	(0)	1677699
13	26.7	1.2	7.2	chr17	76265748	76265829	(6991612)	+	G-rich	Low_complexity	1	83	(0)	1677699
15	23.2	0.0	2.1	chr17	76265790	76265836	(6991605)	+	(GCCGAGG)n	Simple_repeat	1	47	(0)	1677700
2043	12.0	0.0	0.3	chr17	76302884	76303183	(6954258)	C	AluSq	SINE/Alu	(14)	299	1	1677758
23	21.8	0.0	0.0	chr17	76446440	76446499	(6810942)	+	A-rich	Low_complexity	1	60	(0)	1678044
201	35.0	4.9	1.0	chr17	76446560	76446657	(6810784)	+	UCON80_AMi	Unknown	4	105	(117)	1678045
12	16.0	4.3	6.1	chr17	76446993	76447039	(6810402)	+	(CCTC)n	Simple_repeat	1	49	(0)	1678046
12	18.1	2.4	4.8	chr17	76585911	76585951	(6671490)	+	(CCCG)n	Simple_repeat	1	42	(0)	1678331
1254	23.8	3.7	4.5	chr17	76845167	76845355	(6412086)	C	MER68B	LTR/ERVL	(186)	378	183	1678876
242	29.9	1.3	0.0	chr17	76969746	76969822	(6287619)	C	Tigger4	DNA/TcMar-Tigger	(620)	2111	2034	1679133
13	43.0	1.1	0.0	chr17	77356599	77356688	(5900753)	+	(CTC)n	Simple_repeat	1	91	(0)	1679930
11	20.8	6.8	0.0	chr17	77366795	77366838	(5890603)	+	(GGAGCGG)n	Simple_repeat	1	47	(0)	1679948
18	10.3	2.1	6.2	chr17	77373272	77373318	(5884123)	+	G-rich	Low_complexity	1	48	(0)	1679958
13	22.7	2.0	3.9	chr17	77373399	77373448	(5883993)	+	(GCCCGG)n	Simple_repeat	1	51	(0)	1679959
1677	15.4	0.3	4.2	chr17	78378020	78378330	(4879111)	+	AluJb	SINE/Alu	1	299	(13)	1681761
14	12.7	0.0	0.0	chr17	78378668	78378693	(4878748)	+	(GGC)n	Simple_repeat	1	26	(0)	1681762
186	32.3	5.0	2.0	chr17	78612516	78612613	(4644828)	C	MIRb	SINE/MIR	(23)	245	145	1682140
949	11.2	0.0	9.6	chr17	78612663	78612840	(4644601)	C	AluSx1	SINE/Alu	(15)	297	137	1682141
299	33.6	4.3	2.9	chr17	78665365	78665502	(4591939)	+	MIRb	SINE/MIR	5	144	(124)	1682245
550	25.7	6.4	0.7	chr17	78665530	78665701	(4591740)	C	L2a	LINE/L2	(2)	3424	3191	1682246
14	13.3	9.5	4.3	chr17	80036887	80036949	(3220492)	+	(CCCTCTCT)n	Simple_repeat	1	69	(0)	1684339
1191	16.1	7.3	3.6	chr17	80259524	80259746	(2997695)	C	AluJo	SINE/Alu	(8)	304	73	1684772
816	16.2	20.6	3.9	chr17	80259749	80260057	(2997384)	C	LTR38A1	LTR/ERV1	(169)	374	1	1684770
209	30.6	4.0	0.0	chr17	80260067	80260138	(2997303)	C	MIR1_Amn	SINE/MIR	(86)	144	70	1684773
303	34.7	0.0	4.5	chr17	80758348	80758501	(2498940)	C	L2	LINE/L2	(473)	2946	2800	1685490
19	17.2	0.0	0.0	chr17	81397396	81397428	(1860013)	+	A-rich	Low_complexity	1	33	(0)	1686229
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
1640	26.2	12.8	4.7	chr17	82076255	82076887	(1180554)	C	L1MEc	LINE/L1	(5695)	705	45	1687111
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2058	15.4	2.0	2.5	chr18	335386	335777	(80037508)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1689635
3096	22.2	9.4	12.2	chr18	552563	552865	(79820420)	+	L1MC4a	LINE/L1	6645	6942	(940)	1689984
1082	12.6	0.0	4.2	chr18	552866	553056	(79820229)	+	L1PB1	LINE/L1	5968	6150	(1)	1689985
23	15.5	6.0	0.0	chr18	5296223	5296272	(75077013)	+	(GC)n	Simple_repeat	1	53	(0)	1697045
14	14.3	8.3	1.9	chr18	5296391	5296438	(75076847)	+	(CGCCGG)n	Simple_repeat	1	52	(0)	1697046
25	22.4	7.0	2.5	chr18	5543320	5543433	(74829852)	+	(GCGCCGC)n	Simple_repeat	1	122	(0)	1697365
23	19.4	1.4	5.5	chr18	5543663	5543734	(74829551)	+	(GGCG)n	Simple_repeat	1	73	(0)	1697366
13	19.9	2.4	2.3	chr18	5543797	5543838	(74829447)	+	(CCACGCC)n	Simple_repeat	1	43	(0)	1697367
2089	13.9	0.3	0.3	chr18	5581715	5582016	(74791269)	+	AluJo	SINE/Alu	1	302	(10)	1697429
36	12.7	1.0	8.7	chr18	5895561	5895664	(74477621)	+	(CCCCCGC)n	Simple_repeat	1	95	(0)	1697832
14	10.8	3.1	3.0	chr18	5895687	5895718	(74477567)	+	GA-rich	Low_complexity	1	33	(0)	1697833
14	15.7	0.0	5.1	chr18	5895724	5895762	(74477523)	+	(GGCACGG)n	Simple_repeat	1	39	(0)	1697834
12	13.9	0.0	0.0	chr18	5895958	5895981	(74477304)	+	(TCCC)n	Simple_repeat	1	24	(0)	1697835
20	18.4	0.0	0.0	chr18	5896431	5896467	(74476818)	+	GA-rich	Low_complexity	1	37	(0)	1697836
22351	11.4	1.7	3.2	chr18	6377335	6383770	(73989515)	C	L1PA7	LINE/L1	(12)	6457	5	1698467
18	3.8	0.0	3.5	chr18	6543394	6543423	(73829862)	+	(TTTA)n	Simple_repeat	1	28	(0)	1698702
630	29.6	5.6	3.1	chr18	6543743	6543934	(73829351)	+	MIRb	SINE/MIR	20	216	(52)	1698703
14	28.8	0.0	0.0	chr18	9136873	9136919	(71236366)	+	(GGCGAC)n	Simple_repeat	1	47	(0)	1702521
14	21.9	2.0	3.9	chr18	9137107	9137157	(71236128)	+	(CGCCC)n	Simple_repeat	1	52	(0)	1702522
12	21.0	2.5	2.4	chr18	9137210	9137249	(71236036)	+	(CCG)n	Simple_repeat	1	41	(0)	1702523
16	11.4	5.0	2.4	chr18	9137283	9137322	(71235963)	+	G-rich	Low_complexity	1	42	(0)	1702524
15	13.7	0.0	0.0	chr18	9915436	9915459	(70457826)	+	(T)n	Simple_repeat	1	24	(0)	1703865
20	21.8	1.3	6.3	chr18	12308129	12308206	(68065079)	+	G-rich	Low_complexity	1	79	(0)	1707182
13	24.3	0.0	7.1	chr18	13217608	13217663	(67155622)	+	(GCG)n	Simple_repeat	1	56	(0)	1708813
12	25.1	0.0	4.3	chr18	21242856	21242901	(59130384)	+	G-rich	Low_complexity	1	46	(0)	1712210
1820	13.2	7.7	4.6	chr18	22535999	22536300	(57836985)	C	AluJb	SINE/Alu	(0)	312	1	1714685
13	17.6	0.0	2.9	chr18	22536545	22536578	(57836707)	+	(ATTTT)n	Simple_repeat	1	34	(0)	1714686
22	11.8	0.0	2.5	chr18	23006986	23007017	(57366268)	+	(TG)n	Simple_repeat	1	31	(0)	1715378
2330	10.6	0.0	0.0	chr18	23007018	23007320	(57365965)	C	AluSx1	SINE/Alu	(9)	303	1	1715379
624	24.1	9.5	8.0	chr18	23117853	23118141	(57255144)	C	L2c	LINE/L2	(1)	3386	3093	1715644
13	9.7	0.0	0.0	chr18	23453296	23453317	(56919968)	+	(CGC)n	Simple_repeat	1	22	(0)	1716229
12	20.8	0.0	2.9	chr18	23453660	23453694	(56919591)	+	G-rich	Low_complexity	1	35	(0)	1716230
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
1814	18.1	0.3	0.0	chr18	24369940	24370237	(56003048)	+	AluJo	SINE/Alu	1	299	(13)	1717821
37	25.6	0.9	1.8	chr18	25351813	25351922	(55021363)	+	(GGC)n	Simple_repeat	1	111	(0)	1719215
27	10.9	2.0	1.9	chr18	25351924	25351974	(55021311)	+	(GAG)n	Simple_repeat	1	52	(0)	1719216
14689	12.9	2.6	2.0	chr18	25492738	25495139	(54878146)	+	Tigger1	DNA/TcMar-Tigger	1	2418	(0)	1719411
232	24.0	8.8	8.0	chr18	25562017	25562129	(54811156)	C	LTR81C	LTR/Gypsy	(927)	226	113	1719509
33	2.8	2.8	0.0	chr18	25562219	25562254	(54811031)	+	(AT)n	Simple_repeat	1	37	(0)	1719510
16	28.8	2.5	2.5	chr18	31684626	31684704	(48688581)	+	G-rich	Low_complexity	1	81	(0)	1728040
18	24.3	6.3	1.2	chr18	31685553	31685631	(48687654)	+	(CCG)n	Simple_repeat	1	84	(0)	1728041
1089	19.9	2.3	3.4	chr18	31710494	31710758	(48662527)	+	MLT1C	LTR/ERVL-MaLR	206	467	(0)	1728091
810	16.9	0.8	1.5	chr18	31945541	31945676	(48427609)	C	FLAM_C	SINE/Alu	(8)	135	1	1728485
3700	17.1	1.1	8.1	chr18	31945829	31945925	(48427360)	+	MER4E1	LTR/ERV1	1	89	(692)	1728486
18	25.0	0.0	3.3	chr18	32470449	32470508	(47902777)	+	(CCG)n	Simple_repeat	1	60	(0)	1729399
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
17	22.0	2.0	2.0	chr18	33440758	33440807	(46932478)	+	(GCG)n	Simple_repeat	1	51	(0)	1730735
23	15.2	3.1	4.5	chr18	34224973	34224987	(46148298)	+	(CCCCT)n	Simple_repeat	30	69	(0)	1731667
13	17.6	2.5	2.4	chr18	34225082	34225121	(46148164)	+	(GCAGGCT)n	Simple_repeat	1	41	(0)	1731669
14	24.6	0.0	3.9	chr18	34225331	34225382	(46147903)	+	(TCCCCCT)n	Simple_repeat	1	52	(0)	1731670
2373	10.5	0.0	0.0	chr18	34485633	34485936	(45887349)	+	AluSq2	SINE/Alu	1	304	(9)	1732021
16	9.8	0.0	0.0	chr18	34914314	34914335	(45458950)	+	(T)n	Simple_repeat	1	22	(0)	1732587
15	4.2	4.0	0.0	chr18	35376959	35376983	(44996302)	+	(CCGCG)n	Simple_repeat	1	26	(0)	1733224
4737	16.6	2.7	1.3	chr18	35421968	35422810	(44950475)	C	L1ME1	LINE/L1	(5478)	1690	836	1733291
3021	17.5	3.7	0.0	chr18	35422804	35423347	(44949938)	C	L1ME1	LINE/L1	(6591)	577	13	1733291
369	29.1	2.6	0.9	chr18	35583031	35583141	(44790144)	C	L2a	LINE/L2	(10)	3416	3304	1733550
513	25.2	3.7	0.0	chr18	35583179	35583333	(44789952)	+	MER5A1	DNA/hAT-Charlie	2	162	(4)	1733551
408	31.2	4.9	9.9	chr18	35583426	35583596	(44789689)	+	L2a	LINE/L2	3226	3426	(0)	1733552
221	20.7	1.7	1.7	chr18	37421989	37422047	(42951238)	C	L3b	LINE/CR1	(180)	5052	4994	1736029
814	15.8	0.0	0.8	chr18	46182462	46182588	(34190697)	+	AluJo	SINE/Alu	1	126	(186)	1748201
12	8.3	3.6	3.5	chr18	48409784	48409811	(31963474)	+	(TCTTT)n	Simple_repeat	1	29	(0)	1751863
2104	16.9	3.0	0.2	chr18	49827503	49827948	(30545337)	+	L1M4	LINE/L1	1327	1785	(5732)	1754271
773	26.8	0.0	0.6	chr18	49827949	49828128	(30545157)	C	MER8	DNA/TcMar-Tigger	(0)	239	61	1754272
969	13.0	1.1	2.3	chr18	49828167	49828352	(30544933)	+	L1MB4	LINE/L1	1783	2055	(4670)	1754273
568	21.6	14.2	0.0	chr18	50812787	50812925	(29560360)	+	MER5B	DNA/hAT-Charlie	1	162	(16)	1755789
539	22.1	0.0	0.0	chr18	50812943	50813037	(29560248)	C	MER81	DNA/hAT-Blackjack	(4)	110	16	1755790
1001	20.1	0.0	1.1	chr18	50813423	50813613	(29559672)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1755791
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
207	22.8	10.2	3.7	chr18	50968522	50968603	(29404682)	C	MER5B	DNA/hAT-Charlie	(4)	174	87	1756119
261	31.3	2.0	2.9	chr18	50968735	50968836	(29404449)	+	L2a	LINE/L2	3316	3416	(10)	1756120
20	26.7	3.8	3.7	chr18	51197273	51197378	(29175907)	+	(GGCCGC)n	Simple_repeat	1	106	(0)	1756518
2383	9.9	0.0	2.0	chr18	54269014	54269316	(26103969)	+	AluSq	SINE/Alu	1	297	(16)	1761008
14	26.0	0.0	0.0	chr18	54269571	54269611	(26103674)	+	(GAC)n	Simple_repeat	1	41	(0)	1761009
1529	21.1	2.7	3.3	chr18	57684662	57685028	(22688257)	+	MLT1C	LTR/ERVL-MaLR	1	365	(102)	1765989
2271	9.6	0.0	2.0	chr18	62709887	62710187	(17663098)	+	AluSq2	SINE/Alu	2	296	(17)	1773925
205	25.5	9.7	6.4	chr18	62710188	62710214	(17663071)	+	L2a	LINE/L2	3397	3423	(3)	1773924
373	16.9	6.7	2.4	chr18	62710541	62710625	(17662660)	C	MER135	DNA	(64)	164	76	1773926
12	19.9	9.6	0.0	chr18	69400657	69400708	(10972577)	+	G-rich	Low_complexity	1	57	(0)	1783142
16	18.9	0.0	0.0	chr18	69400822	69400851	(10972434)	+	(C)n	Simple_repeat	1	30	(0)	1783143
13	15.8	2.7	2.6	chr18	69401202	69401238	(10972047)	+	(CGGAGCG)n	Simple_repeat	1	38	(0)	1783144
217	28.8	3.6	3.6	chr18	74495552	74495634	(5877651)	+	MIRb	SINE/MIR	149	231	(37)	1789970
1946	22.0	2.4	2.4	chr18	79150104	79150519	(1222766)	+	L1MEf	LINE/L1	5386	5800	(442)	1795220
1288	18.9	6.8	0.5	chr18	79150708	79150929	(1222356)	+	AluJr4	SINE/Alu	1	237	(75)	1795222
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
12	19.7	0.0	0.0	chr18	79246840	79246868	(1126417)	+	(CTC)n	Simple_repeat	1	29	(0)	1795348
2938	10.7	1.1	0.9	chr18	80262297	80262869	(110416)	+	TAR1	Satellite/telo	645	1218	(893)	1796345
32	0.0	0.0	0.0	chr19	267223	267252	(58350364)	+	(CGCTG)n	Simple_repeat	1	30	(0)	1796658
2366	7.3	2.3	0.0	chr19	267692	267992	(58349624)	+	AluSp	SINE/Alu	3	310	(3)	1796659
277	27.3	10.5	1.5	chr19	513001	513130	(58104486)	+	MLT1F1	LTR/ERVL-MaLR	415	557	(12)	1797055
23	20.5	6.2	1.2	chr19	1026576	1026655	(57590961)	+	(CCCGT)n	Simple_repeat	1	85	(0)	1798100
18	22.9	2.3	6.7	chr19	1026656	1026661	(57590955)	+	(GCCC)n	Simple_repeat	2	89	(0)	1798101
255	18.4	3.9	0.0	chr19	1591116	1591190	(57026426)	+	L2b	LINE/L2	3123	3198	(177)	1799090
2073	10.7	1.3	4.2	chr19	1838026	1838334	(56779282)	+	AluSq	SINE/Alu	1	300	(13)	1799603
12	11.2	4.3	8.3	chr19	1930116	1930161	(56687455)	+	G-rich	Low_complexity	1	48	(0)	1799778
220	31.0	11.4	2.5	chr19	2028708	2028826	(56588790)	C	L3b	LINE/CR1	(167)	5065	4935	1799995
2442	6.0	0.0	0.7	chr19	2029016	2029313	(56588303)	C	AluY	SINE/Alu	(15)	296	1	1799996
17	19.3	0.0	2.3	chr19	2476438	2476480	(56141136)	+	G-rich	Low_complexity	1	43	(0)	1800892
663	32.6	8.6	1.0	chr19	2523538	2523838	(56093778)	+	L1MD2	LINE/L1	6034	6359	(0)	1801010
13	31.8	0.0	1.8	chr19	2841855	2841910	(55775706)	+	(CCCCG)n	Simple_repeat	1	56	(0)	1801762
2267	12.2	0.0	0.0	chr19	2937746	2938056	(55679560)	C	AluSx1	SINE/Alu	(1)	311	1	1801957
1050	22.2	1.3	0.0	chr19	3870566	3870786	(54746830)	+	L1MC3	LINE/L1	7013	7236	(549)	1804203
1520	15.7	1.0	8.0	chr19	4001909	4002080	(54615536)	C	AluJo	SINE/Alu	(22)	290	128	1804534
2323	6.6	2.7	0.0	chr19	4002081	4002368	(54615248)	+	AluY	SINE/Alu	1	296	(15)	1804535
421	24.5	2.8	2.8	chr19	4670677	4670819	(53946797)	+	L1MC4a	LINE/L1	7108	7250	(632)	1806159
887	11.4	0.8	1.5	chr19	5507941	5508072	(53109544)	+	AluJr	SINE/Alu	1	131	(181)	1808185
2364	7.2	0.0	0.3	chr19	5508080	5508372	(53109244)	C	AluY	SINE/Alu	(19)	292	1	1808186
15	24.9	1.4	5.7	chr19	5567588	5567656	(53049960)	+	(CGCCCC)n	Simple_repeat	1	70	(0)	1808366
12	11.1	0.0	8.6	chr19	5567631	5567665	(53049951)	+	(CCCCA)n	Simple_repeat	1	35	(0)	1808367
23	17.2	8.0	5.9	chr19	5567903	5567926	(53049690)	+	(CGGCCGCC)n	Simple_repeat	1	113	(39)	1808368
13	12.7	0.0	9.5	chr19	6459847	6459888	(52157728)	+	G-rich	Low_complexity	1	42	(0)	1810295
807	23.0	7.1	0.9	chr19	6604065	6604275	(52013341)	C	MLT1J	LTR/ERVL-MaLR	(236)	276	52	1810687
329	22.2	11.3	11.3	chr19	6878731	6878824	(51738792)	C	MIR	SINE/MIR	(0)	262	162	1811442
288	24.5	11.3	5.0	chr19	7364429	7364542	(51253074)	C	MIR3	SINE/MIR	(143)	125	4	1812754
2091	12.8	2.2	0.0	chr19	7689611	7689915	(50927701)	C	AluSx1	SINE/Alu	(0)	312	1	1813500
180	35.2	3.3	0.0	chr19	7853528	7853615	(50764001)	C	L2a	LINE/L2	(66)	3360	3270	1813860
181	24.4	4.2	3.2	chr19	7853673	7853765	(50763851)	C	L2a	LINE/L2	(339)	3080	2987	1813860
351	20.1	0.2	5.0	chr19	8096224	8096315	(50521301)	C	MIR	SINE/MIR	(89)	179	87	1814381
2109	11.7	3.2	1.9	chr19	8143485	8143792	(50473824)	C	AluSz6	SINE/Alu	(0)	312	1	1814504
2469	7.7	0.0	0.0	chr19	8224127	8224425	(50393191)	+	AluSg	SINE/Alu	1	299	(11)	1814747
280	36.4	4.7	3.2	chr19	8224449	8224638	(50392978)	C	L2c	LINE/L2	(179)	3208	3016	1814748
1131	10.9	0.0	0.0	chr19	8243077	8243223	(50374393)	+	AluJr	SINE/Alu	166	312	(0)	1814803
209	27.3	3.5	0.0	chr19	9934676	9934730	(48682886)	C	L2b	LINE/L2	(14)	3361	3305	1818495
465	25.5	8.7	0.3	chr19	10380019	10380165	(48237451)	+	MIR	SINE/MIR	105	260	(2)	1819589
226	24.1	0.0	0.0	chr19	10548670	10548723	(48068893)	+	MIRc	SINE/MIR	111	164	(104)	1820070
2154	11.5	0.3	0.0	chr19	10549129	10549416	(48068200)	C	AluSq2	SINE/Alu	(18)	295	7	1820071
1699	14.4	1.8	3.8	chr19	10593195	10593485	(48024131)	C	AluJb	SINE/Alu	(27)	285	1	1820191
2198	12.6	0.3	0.3	chr19	10593649	10593958	(48023658)	+	AluSx	SINE/Alu	2	311	(1)	1820192
16	8.5	0.0	0.0	chr19	10960669	10960693	(47656923)	+	(CCG)n	Simple_repeat	1	25	(0)	1821123
2110	6.8	4.5	0.4	chr19	11089873	11090150	(47527466)	C	AluSx1	SINE/Alu	(22)	290	1	1821402
14	19.8	0.0	4.5	chr19	11090388	11090431	(47527185)	+	(GCCCCC)n	Simple_repeat	1	44	(0)	1821403
2320	7.5	0.0	0.0	chr19	11125841	11126120	(47491496)	+	AluSq2	SINE/Alu	1	280	(33)	1821510
16	5.3	0.0	0.0	chr19	11126378	11126397	(47491219)	+	(T)n	Simple_repeat	1	20	(0)	1821511
14	0.0	0.0	0.0	chr19	11126562	11126579	(47491037)	+	(CATT)n	Simple_repeat	1	18	(0)	1821512
774	16.5	0.0	3.1	chr19	11126580	11126706	(47490910)	C	AluJr	SINE/Alu	(188)	124	2	1821513
1775	13.1	3.3	0.8	chr19	11382218	11382361	(47235255)	C	AluJo	SINE/Alu	(29)	283	137	1822182
2615	4.3	0.3	0.0	chr19	11382362	11382662	(47234954)	C	AluSp	SINE/Alu	(11)	302	1	1822183
1823	13.2	8.2	0.4	chr19	11529417	11529697	(47087919)	+	AluJr	SINE/Alu	1	305	(7)	1822567
1531	20.9	11.6	2.9	chr19	11602031	11602486	(47015130)	C	MER92B	LTR/ERV1	(111)	525	28	1822771
725	23.8	7.8	2.2	chr19	11602547	11602774	(47014842)	+	MER21C	LTR/ERVL	672	913	(25)	1822773
52	11.9	0.0	0.0	chr19	11640511	11640595	(46977021)	+	(TA)n	Simple_repeat	1	85	(0)	1822848
2237	11.8	0.3	0.7	chr19	12543019	12543324	(46074292)	+	AluSx	SINE/Alu	1	305	(7)	1824651
2399	9.5	0.7	0.0	chr19	12543396	12543699	(46073917)	+	AluSx3	SINE/Alu	2	307	(4)	1824652
15	17.7	1.7	8.2	chr19	12946025	12946084	(45671532)	+	G-rich	Low_complexity	1	61	(0)	1825594
11	32.1	0.0	3.3	chr19	12946211	12946271	(45671345)	+	(GCCCCG)n	Simple_repeat	1	61	(0)	1825595
12	21.6	0.0	0.0	chr19	14136479	14136510	(44481106)	+	G-rich	Low_complexity	1	32	(0)	1828671
18	0.0	0.0	0.0	chr19	15331873	15331895	(43285721)	+	(TCC)n	Simple_repeat	1	23	(0)	1831589
22	15.4	0.0	0.0	chr19	15450047	15450082	(43167534)	+	(C)n	Simple_repeat	1	36	(0)	1831820
318	29.2	1.1	0.4	chr19	15890600	15890707	(42726909)	+	MIR3	SINE/MIR	19	125	(105)	1832733
597	26.7	2.5	10.8	chr19	15890732	15890991	(42726625)	+	MIR	SINE/MIR	17	254	(8)	1832734
19	18.4	4.1	0.0	chr19	16076233	16076281	(42541335)	+	GA-rich	Low_complexity	1	51	(0)	1833070
592	31.9	12.6	5.0	chr19	16528492	16528671	(42088945)	C	L1M5	LINE/L1	(2164)	3982	3773	1834141
2070	14.6	0.0	1.9	chr19	17102619	17102927	(41514689)	+	AluJo	SINE/Alu	1	303	(9)	1835492
1599	18.8	3.7	2.4	chr19	17102933	17103224	(41514392)	+	AluJo	SINE/Alu	1	296	(16)	1835493
2500	18.5	3.0	4.9	chr19	17103243	17103775	(41513841)	C	MER74A	LTR/ERVL	(18)	540	17	1835494
1210	28.1	12.0	0.6	chr19	17353219	17353911	(41263705)	+	L2a	LINE/L2	2622	3421	(5)	1836099
13	27.5	2.1	0.0	chr19	17448736	17448783	(41168833)	+	G-rich	Low_complexity	1	49	(0)	1836377
2312	6.7	0.0	0.0	chr19	17448902	17449185	(41168431)	+	AluSg	SINE/Alu	1	284	(26)	1836378
14	19.1	6.2	4.3	chr19	17539743	17539807	(41077809)	+	(GCGTGAG)n	Simple_repeat	1	69	(0)	1836643
31	27.6	2.7	0.9	chr19	18153180	18153289	(40464327)	+	(GGC)n	Simple_repeat	1	113	(0)	1838227
394	27.0	5.3	0.0	chr19	18701268	18701407	(39916209)	+	MIR	SINE/MIR	99	243	(19)	1839406
2246	9.4	0.0	3.9	chr19	18701605	18701913	(39915703)	C	AluSz	SINE/Alu	(11)	301	5	1839407
12	20.2	4.1	3.9	chr19	18831910	18831958	(39785658)	+	(CGACGG)n	Simple_repeat	1	51	(0)	1839690
25	26.8	2.9	2.8	chr19	18831937	18832039	(39785577)	+	(CGG)n	Simple_repeat	1	106	(0)	1839691
16	22.7	3.0	4.3	chr19	18832095	18832161	(39785455)	+	(CCGCGG)n	Simple_repeat	1	69	(0)	1839692
17	4.3	0.0	0.0	chr19	19643609	19643632	(38973984)	+	(GCC)n	Simple_repeat	1	24	(0)	1841358
1833	12.1	3.1	4.7	chr19	23273428	23273725	(35343891)	+	AluSz	SINE/Alu	1	293	(19)	1846448
2208	20.3	2.7	2.9	chr19	23273726	23273754	(35343862)	+	MER57E3	LTR/ERV1	459	481	(6)	1846447
1530	11.6	7.2	0.0	chr19	24033971	24034203	(34583413)	C	AluSz6	SINE/Alu	(18)	294	44	1847496
13	31.8	0.0	1.8	chr19	29526522	29526578	(29091038)	+	(GCCCCC)n	Simple_repeat	1	57	(0)	1850369
1634	23.2	2.8	9.1	chr19	29771548	29772044	(28845572)	+	MLT1C	LTR/ERVL-MaLR	3	467	(0)	1850810
14	20.0	2.4	2.3	chr19	29811263	29811304	(28806312)	+	(TGAA)n	Simple_repeat	1	43	(0)	1850905
1609	16.4	1.8	1.1	chr19	29844021	29844294	(28773322)	C	AluJr	SINE/Alu	(6)	306	31	1850974
26	15.1	0.0	1.9	chr19	29844484	29844536	(28773080)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1850975
806	29.5	15.8	4.3	chr19	30000258	30001290	(28616326)	C	HAL1	LINE/L1	(607)	1900	747	1851284
1672	17.5	0.0	5.8	chr19	30466049	30466231	(28151385)	+	AluJb	SINE/Alu	125	291	(21)	1851895
1762	17.8	0.3	6.8	chr19	30466260	30466585	(28151031)	+	AluJb	SINE/Alu	1	305	(7)	1851898
19	7.4	3.5	0.0	chr19	30466586	30466614	(28151002)	+	(GA)n	Simple_repeat	1	30	(0)	1851899
16	17.0	2.7	0.0	chr19	31349133	31349172	(27268444)	+	GA-rich	Low_complexity	1	41	(0)	1853078
16	16.2	0.0	2.7	chr19	31349229	31349265	(27268351)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	1853079
15	17.9	0.0	4.8	chr19	31349277	31349318	(27268298)	+	G-rich	Low_complexity	1	42	(0)	1853080
39	18.5	1.0	4.0	chr19	31349425	31349523	(27268093)	+	GA-rich	Low_complexity	1	100	(0)	1853081
1922	13.3	0.3	3.8	chr19	32305521	32305813	(26311803)	+	AluSz	SINE/Alu	1	283	(29)	1854560
27	6.1	0.0	0.0	chr19	32305814	32305848	(26311768)	+	(AAAT)n	Simple_repeat	1	35	(0)	1854561
1023	23.5	5.0	12.8	chr19	32305849	32305994	(26311622)	C	L1ME4b	LINE/L1	(50)	842	729	1854559
2142	9.4	0.0	2.8	chr19	32305995	32306180	(26311436)	C	AluSx4	SINE/Alu	(0)	310	132	1854562
61	0.0	0.0	0.0	chr19	32306181	32306232	(26311384)	+	(TA)n	Simple_repeat	1	52	(0)	1854563
2142	9.4	0.0	2.8	chr19	32306233	32306368	(26311248)	C	AluSx4	SINE/Alu	(179)	131	1	1854562
2151	20.3	0.0	0.3	chr19	32372880	32373245	(26244371)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1854680
694	16.9	0.0	5.1	chr19	32373247	32373383	(26244233)	C	MLT1G3	LTR/ERVL-MaLR	(235)	130	1	1854672
1891	10.4	3.7	0.0	chr19	33064062	33064321	(25553295)	+	AluJo	SINE/Alu	1	270	(42)	1856077
21	19.7	1.4	5.6	chr19	33064925	33064997	(25552619)	+	(GCCCC)n	Simple_repeat	1	69	(0)	1856078
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
11	13.2	5.7	2.7	chr19	34772894	34772928	(23844688)	+	G-rich	Low_complexity	1	37	(0)	1859111
2622	4.2	0.0	1.3	chr19	34877139	34877445	(23740171)	+	AluY	SINE/Alu	1	303	(8)	1859259
31	10.7	0.0	0.0	chr19	35900798	35900849	(22716767)	+	(T)n	Simple_repeat	1	52	(0)	1861405
22	11.8	9.1	0.0	chr19	35936427	35936481	(22681135)	+	(CCCGGC)n	Simple_repeat	1	60	(0)	1861511
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
19	21.8	5.0	1.6	chr19	36604933	36604992	(22012624)	+	(CA)n	Simple_repeat	1	63	(0)	1862875
192	25.7	10.7	0.0	chr19	36687879	36687972	(21929644)	+	L2a	LINE/L2	3260	3400	(26)	1863053
438	32.6	0.9	4.2	chr19	38009546	38009785	(20607831)	C	MIRb	SINE/MIR	(34)	234	3	1865612
662	18.3	4.8	19.6	chr19	38544444	38544667	(20072949)	+	MER91B	DNA/hAT-Tip100	1	189	(1)	1866900
6192	16.0	2.8	1.3	chr19	38980490	38981380	(19636236)	+	LTR28C	LTR/ERV1	220	1128	(1)	1867902
51	0.0	0.0	0.0	chr19	39476675	39476718	(19140898)	+	(GT)n	Simple_repeat	1	44	(0)	1869159
270	28.1	4.6	4.6	chr19	39996743	39996850	(18620766)	C	L2c	LINE/L2	(0)	3387	3280	1870082
187	37.0	0.0	1.4	chr19	40219654	40219727	(18397889)	C	L2b	LINE/L2	(78)	3297	3225	1870520
453	33.0	4.9	0.9	chr19	40219783	40219999	(18397617)	+	MIR	SINE/MIR	36	261	(1)	1870521
216	20.0	2.0	0.0	chr19	40220031	40220080	(18397536)	+	L2a	LINE/L2	3376	3426	(0)	1870522
13	29.6	0.0	0.0	chr19	40425604	40425648	(18191968)	+	(CGG)n	Simple_repeat	1	45	(0)	1871022
2445	6.6	0.7	0.3	chr19	40447374	40447678	(18169938)	+	AluYh3	SINE/Alu	1	306	(5)	1871087
264	25.6	0.0	21.5	chr19	42218668	42218750	(16398866)	+	MIR3	SINE/MIR	34	89	(119)	1874826
706	29.7	3.0	5.5	chr19	42256592	42256865	(16360751)	C	MIRb	SINE/MIR	(0)	268	2	1874892
1960	9.6	2.3	6.1	chr19	42256919	42257231	(16360385)	+	AluSq	SINE/Alu	1	301	(12)	1874893
2332	8.4	1.0	0.7	chr19	42257232	42257540	(16360076)	+	AluSp	SINE/Alu	1	310	(3)	1874894
192	21.6	0.0	0.0	chr19	42325126	42325162	(16292454)	+	MIR1_Amn	SINE/MIR	117	153	(77)	1875033
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
521	10.7	1.1	2.6	chr19	42412608	42412723	(16204893)	+	MSR1	Satellite	1	114	(0)	1875228
7943	7.8	0.5	0.0	chr19	43031177	43032178	(15585438)	C	LTR13	LTR/ERVK	(0)	1007	1	1876133
678	28.4	4.9	7.2	chr19	43474766	43474891	(15142725)	C	L2b	LINE/L2	(299)	3076	2971	1876862
12	21.3	7.1	1.7	chr19	43481887	43481942	(15135674)	+	GA-rich	Low_complexity	1	60	(0)	1876883
468	31.5	8.9	0.1	chr19	43482005	43482201	(15135415)	C	MIRb	SINE/MIR	(0)	262	47	1876884
465	17.9	17.8	6.4	chr19	43532423	43532595	(15085021)	C	MIR	SINE/MIR	(38)	224	28	1877037
2064	13.0	5.0	0.0	chr19	44051093	44051414	(14566202)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1878120
411	27.6	16.9	5.4	chr19	44051415	44051524	(14566092)	+	L2	LINE/L2	628	775	(2644)	1878118
227	24.0	17.5	0.0	chr19	44108671	44108774	(14508842)	+	L2a	LINE/L2	3300	3425	(1)	1878216
296	32.5	3.0	0.6	chr19	44113744	44113907	(14503709)	+	MIR	SINE/MIR	69	236	(26)	1878225
891	21.6	3.8	10.6	chr19	44114293	44114516	(14503100)	C	L1MC4	LINE/L1	(392)	7650	7447	1878226
21	4.1	0.0	0.0	chr19	44212367	44212391	(14405225)	+	(T)n	Simple_repeat	1	25	(0)	1878385
14	15.8	0.0	5.1	chr19	44212678	44212716	(14404900)	+	(GAGGCC)n	Simple_repeat	1	39	(0)	1878386
481	27.7	2.8	0.0	chr19	44212780	44212916	(14404700)	+	MIR	SINE/MIR	95	235	(27)	1878387
368	24.9	13.2	1.5	chr19	44490922	44491121	(14126495)	+	L2a	LINE/L2	3190	3416	(10)	1878817
190	34.6	4.9	1.4	chr19	46613757	46613894	(12003722)	C	MIRb	SINE/MIR	(120)	148	6	1884108
506	21.2	3.5	0.0	chr19	46613909	46614045	(12003571)	C	Charlie19a	DNA/hAT-Charlie	(33)	353	212	1884109
1985	15.1	0.0	0.3	chr19	47237966	47238256	(11379360)	C	AluJb	SINE/Alu	(22)	290	1	1885621
2053	14.3	0.3	0.3	chr19	47581023	47581336	(11036280)	+	7SLRNA	srpRNA	1	314	(6)	1886482
983	18.4	0.0	0.0	chr19	47581340	47581507	(11036109)	+	AluJr	SINE/Alu	137	304	(8)	1886483
879	14.8	0.0	0.8	chr19	47744804	47744931	(10872685)	+	FLAM_C	SINE/Alu	1	127	(16)	1886956
1645	18.3	0.3	3.0	chr19	47744950	47745250	(10872366)	+	AluJo	SINE/Alu	1	293	(19)	1886957
32	13.3	1.6	1.6	chr19	47941280	47941340	(10676276)	+	(ACA)n	Simple_repeat	1	62	(0)	1887495
246	27.9	0.0	0.0	chr19	47941403	47941463	(10676153)	+	L1MC4	LINE/L1	650	710	(5505)	1887496
1211	21.3	2.6	1.0	chr19	47994899	47995201	(10622415)	C	MER33	DNA/hAT-Charlie	(7)	317	10	1887649
942	18.4	16.0	12.0	chr19	48110376	48110462	(10507154)	+	MLT1B	LTR/ERVL-MaLR	301	379	(11)	1887967
272	6.2	0.0	0.0	chr19	48393211	48393258	(10224358)	C	MSR1	Satellite	(32)	79	32	1888649
2356	9.7	0.3	0.0	chr19	48667575	48667874	(9949742)	+	AluSx	SINE/Alu	1	301	(11)	1889334
303	30.1	4.8	4.5	chr19	48668153	48668337	(9949279)	+	MIRc	SINE/MIR	13	191	(17)	1889335
897	24.9	0.5	7.9	chr19	48668309	48668548	(9949068)	C	MIR	SINE/MIR	(21)	241	20	1889336
446	28.4	1.5	2.2	chr19	48668616	48668752	(9948864)	+	MIR	SINE/MIR	29	164	(98)	1889337
224	20.8	2.0	0.0	chr19	48668748	48668795	(9948821)	+	L2a	LINE/L2	3378	3426	(0)	1889338
14	16.9	2.3	4.4	chr19	48714440	48714483	(9903133)	+	(CGCGG)n	Simple_repeat	1	45	(0)	1889450
13	18.7	0.0	5.0	chr19	48714563	48714602	(9903014)	+	G-rich	Low_complexity	1	40	(0)	1889451
294	27.5	0.0	3.8	chr19	48714643	48714748	(9902868)	C	MSR1	Satellite	(7)	104	3	1889452
200	11.8	2.9	0.0	chr19	48823003	48823036	(9794580)	C	L2a	LINE/L2	(76)	3350	3316	1889696
509	27.8	2.2	0.0	chr19	48823037	48823212	(9794404)	+	L1MC5a	LINE/L1	2367	2546	(231)	1889697
1331	17.7	0.5	0.5	chr19	48823214	48823428	(9794188)	+	AluJb	SINE/Alu	87	301	(11)	1889698
226	22.2	0.0	0.0	chr19	49097358	49097402	(9520214)	+	L2b	LINE/L2	3312	3356	(19)	1890373
874	8.3	0.8	0.8	chr19	49097405	49097538	(9520078)	+	MER85	DNA/PiggyBac	6	139	(0)	1890374
184	22.6	15.1	3.1	chr19	49097550	49097613	(9520003)	+	OldhAT1	DNA/hAT-Ac	2111	2183	(665)	1890375
294	20.7	2.7	2.5	chr19	49157903	49158099	(9459517)	C	MSR1	Satellite	(0)	197	1	1890486
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
255	26.8	19.8	0.0	chr19	50147795	50147891	(8469725)	+	MIRb	SINE/MIR	33	153	(115)	1892776
2430	9.0	0.3	0.3	chr19	50163434	50163745	(8453871)	C	AluSx	SINE/Alu	(0)	312	1	1892818
948	16.3	3.2	0.0	chr19	50163755	50163937	(8453679)	C	AluSz6	SINE/Alu	(0)	312	125	1892819
31	0.0	0.0	0.0	chr19	50163938	50163971	(8453645)	+	(AT)n	Simple_repeat	1	34	(0)	1892820
2235	11.7	0.0	3.7	chr19	51381029	51381352	(7236264)	+	AluSx1	SINE/Alu	1	312	(0)	1895505
1047	31.7	6.0	9.0	chr19	51381353	51381714	(7235902)	+	MER21C	LTR/ERVL	279	637	(301)	1895504
2286	11.2	0.0	1.0	chr19	51381715	51382027	(7235589)	C	AluY	SINE/Alu	(1)	310	1	1895506
2373	29.6	5.6	2.1	chr19	51514294	51515166	(7102450)	+	ERVL-E-int	LTR/ERVL	2873	3778	(1889)	1895763
1913	27.4	5.7	5.9	chr19	51515190	51515674	(7101942)	C	L1MEg	LINE/L1	(2732)	3587	3079	1895764
415	32.0	11.1	3.9	chr19	51688155	51688544	(6929072)	+	L2c	LINE/L2	2917	3338	(49)	1896047
1872	26.6	3.1	4.2	chr19	53133193	53133715	(5483901)	+	L1MD	LINE/L1	4693	5207	(939)	1898847
685	18.1	4.9	0.0	chr19	54208876	54208991	(4408625)	C	AluJr	SINE/Alu	(190)	122	1	1901311
2040	11.0	0.7	2.3	chr19	55319418	55319747	(3297869)	C	AluSq10	SINE/Alu	(0)	313	3	1903466
19	27.4	0.0	2.9	chr19	55476818	55476886	(3140730)	+	G-rich	Low_complexity	1	69	(0)	1903814
543	7.6	0.0	0.0	chr19	55477350	55477428	(3140188)	C	Alu	SINE/Alu	(1)	310	232	1903815
198	31.6	8.7	0.0	chr19	55504085	55504179	(3113437)	C	MIRb	SINE/MIR	(95)	173	70	1903859
2340	10.3	1.0	0.0	chr19	55780812	55781113	(2836503)	+	AluSx	SINE/Alu	1	305	(7)	1904468
1616	23.0	7.0	2.6	chr19	55781114	55781137	(2836479)	+	L1MA8	LINE/L1	5960	5981	(310)	1904467
33	2.9	0.0	0.0	chr19	55781138	55781172	(2836444)	+	(GGGGCT)n	Simple_repeat	1	35	(0)	1904469
1616	23.0	7.0	2.6	chr19	55781173	55781449	(2836167)	+	L1MA8	LINE/L1	5982	6289	(2)	1904467
1190	22.4	9.8	6.7	chr19	55781531	55782094	(2835522)	C	L1MB3	LINE/L1	(6128)	1492	910	1904454
12185	16.8	4.8	4.9	chr19	57295120	57296115	(1321501)	C	L1M2a	LINE/L1	(1188)	6374	5386	1907582
1114	24.1	0.9	0.0	chr19	57319897	57320120	(1297496)	C	AluJr4	SINE/Alu	(76)	236	11	1907611
325	32.7	10.7	5.8	chr19	57500385	57500764	(1116852)	C	L2	LINE/L2	(538)	2881	2481	1907899
1834	11.0	6.4	0.0	chr19	57826876	57827165	(790451)	C	AluSg	SINE/Alu	(0)	310	3	1908392
874	18.2	0.5	4.3	chr19	58001689	58001895	(615721)	+	L1MB7	LINE/L1	5965	6163	(21)	1908685
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
12	9.2	0.0	4.0	chr19	58347643	58347667	(269949)	+	(GGGC)n	Simple_repeat	1	25	(0)	1909381
14	35.6	0.0	0.0	chr19	58347672	58347738	(269878)	+	(CCGCGC)n	Simple_repeat	1	67	(0)	1909382
2260	10.5	0.3	0.3	chr19	58348071	58348374	(269242)	+	AluSx	SINE/Alu	2	305	(7)	1909383
2634	2.7	0.0	0.3	chr19	58363189	58363488	(254128)	+	AluY	SINE/Alu	1	299	(12)	1909404
398	33.1	20.2	1.6	chr19	58452315	58452688	(164928)	C	L2	LINE/L2	(536)	2883	2423	1909552
306	31.0	11.1	5.1	chr19	58484714	58484776	(132840)	+	L1M5	LINE/L1	4554	4616	(1530)	1909594
2004	13.2	3.4	0.3	chr19	58484777	58485064	(132552)	+	AluJb	SINE/Alu	2	298	(14)	1909595
306	31.0	11.1	5.1	chr19	58485065	58485218	(132398)	+	L1M5	LINE/L1	4617	4774	(1372)	1909594
7941	3.4	12.7	0.7	chr19	58606191	58607452	(10164)	+	TAR1	Satellite/telo	314	1748	(363)	1909801
600	31.9	9.3	4.9	chr2	3269738	3270169	(238923360)	+	ERVL-B4-int	LTR/ERVL	3374	3826	(1841)	1914248
1809	11.1	2.7	2.7	chr2	3574677	3574974	(238618555)	C	AluJb	SINE/Alu	(14)	298	1	1914685
16	17.6	0.0	0.0	chr2	8493969	8493995	(233699534)	+	A-rich	Low_complexity	1	27	(0)	1921466
686	22.2	8.7	5.6	chr2	8494273	8494697	(233698832)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	2	1921467
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
272	29.3	13.6	2.5	chr2	9842774	9842859	(232350670)	C	MIRb	SINE/MIR	(0)	268	170	1923764
811	10.2	6.1	0.0	chr2	9842860	9842967	(232350562)	C	AluJr	SINE/Alu	(195)	117	3	1923765
272	29.3	13.6	2.5	chr2	9842968	9843115	(232350414)	C	MIRb	SINE/MIR	(99)	169	5	1923764
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
489	25.2	0.4	1.4	chr2	10311756	10312946	(231880583)	+	(CATCAT)n	Simple_repeat	1	1196	(0)	1924554
1681	18.9	2.6	1.0	chr2	10691542	10691848	(231501681)	+	7SLRNA	srpRNA	5	316	(4)	1925245
947	22.6	8.2	0.9	chr2	10691850	10692063	(231501466)	+	MIR	SINE/MIR	25	255	(7)	1925246
430	19.8	6.2	2.4	chr2	11071261	11071384	(231122145)	+	L1MC4	LINE/L1	6447	6575	(1467)	1925969
1519	15.7	8.5	1.4	chr2	11071390	11071701	(231121828)	+	MER61B	LTR/ERV1	1	427	(0)	1925970
1806	11.9	0.0	0.4	chr2	11153979	11154230	(231039299)	C	AluSz	SINE/Alu	(14)	298	48	1926127
55	0.0	0.0	0.0	chr2	11483688	11483734	(230709795)	+	(GT)n	Simple_repeat	1	47	(0)	1926728
14	15.4	5.6	0.0	chr2	11830175	11830210	(230363319)	+	(GTGA)n	Simple_repeat	1	38	(0)	1927316
202	28.3	0.0	1.9	chr2	19207485	19207538	(222985991)	+	L2b	LINE/L2	3322	3374	(1)	1938514
230	22.4	0.0	6.5	chr2	19570938	19570999	(222622530)	C	MER81	DNA/hAT-Blackjack	(0)	114	57	1938993
728	14.8	1.7	1.7	chr2	19571015	19571153	(222622376)	C	AluSx3	SINE/Alu	(0)	311	178	1938994
59	8.1	0.0	0.0	chr2	24084341	24084420	(218109109)	+	(CAGGG)n	Simple_repeat	1	80	(0)	1945480
2187	10.7	0.7	1.7	chr2	25361193	25361492	(216832037)	C	AluSx	SINE/Alu	(15)	297	1	1947804
998	15.4	1.1	1.6	chr2	25700040	25700224	(216493305)	C	L1MB3	LINE/L1	(9)	6174	5991	1948405
365	32.4	14.7	1.4	chr2	26346835	26347041	(215846488)	+	MIRb	SINE/MIR	16	254	(14)	1949792
1834	19.7	8.1	2.7	chr2	26402437	26402880	(215790649)	C	ERV3-16A3_I-int	LTR/ERVL	(2204)	3022	2553	1949892
1468	16.5	1.5	20.4	chr2	26402881	26403118	(215790411)	C	MER58B	DNA/hAT-Charlie	(0)	341	109	1949893
13	20.6	0.0	7.7	chr2	27262084	27262135	(214931394)	+	(GGCGGT)n	Simple_repeat	1	52	(0)	1951461
322	28.1	11.8	5.6	chr2	28249953	28250306	(213943223)	C	L2b	LINE/L2	(119)	3307	2955	1953242
249	31.2	6.1	1.1	chr2	28621179	28621272	(213572257)	C	MIRb	SINE/MIR	(167)	101	3	1953871
12	21.7	0.0	0.0	chr2	32039562	32039593	(210153936)	+	(CCCCGA)n	Simple_repeat	1	32	(0)	1959375
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
25	16.0	5.5	2.6	chr2	32947058	32947130	(209246399)	+	(CCCGCTC)n	Simple_repeat	1	77	(0)	1961244
18	17.3	2.0	4.0	chr2	32947622	32947670	(209245859)	+	(CCG)n	Simple_repeat	1	50	(0)	1961245
21	14.9	0.0	4.2	chr2	32947823	32947870	(209245659)	+	(GCCC)n	Simple_repeat	1	48	(0)	1961246
851	30.5	9.7	1.9	chr2	33650640	33650953	(208542576)	+	L3	LINE/CR1	3657	3997	(102)	1962335
2445	18.2	0.6	4.2	chr2	33650997	33651013	(208542516)	C	MER31A	LTR/ERV1	(0)	485	472	1962336
955	9.6	4.2	0.0	chr2	33651014	33651148	(208542381)	+	L1PA12	LINE/L1	6028	6168	(0)	1962337
1915	15.8	4.3	0.0	chr2	36395011	36395301	(205798228)	C	AluSx	SINE/Alu	(8)	304	1	1966010
13	18.2	0.0	0.0	chr2	36598022	36598052	(205595477)	+	(CCGCCT)n	Simple_repeat	1	31	(0)	1966234
29	18.0	4.3	0.0	chr2	36598163	36598232	(205595297)	+	(CGCCC)n	Simple_repeat	1	73	(0)	1966235
18	0.0	0.0	0.0	chr2	36696636	36696655	(205496874)	+	(A)n	Simple_repeat	1	20	(0)	1966374
21	22.7	0.0	0.0	chr2	36696720	36696765	(205496764)	+	(GT)n	Simple_repeat	1	46	(0)	1966375
677	22.2	7.0	10.4	chr2	36771122	36771248	(205422281)	+	L1M5	LINE/L1	5279	5384	(740)	1966500
2300	11.4	0.7	0.0	chr2	36771249	36771555	(205421974)	+	AluSg4	SINE/Alu	2	310	(0)	1966501
1320	20.6	4.9	2.1	chr2	37191358	37191714	(205001815)	C	LTR28C	LTR/ERV1	(58)	709	358	1967310
14	0.0	0.0	0.0	chr2	37324616	37324633	(204868896)	+	(GCG)n	Simple_repeat	1	18	(0)	1967537
13	17.8	5.3	0.0	chr2	37324772	37324809	(204868720)	+	(TCCC)n	Simple_repeat	1	40	(0)	1967538
2256	13.6	1.5	1.2	chr2	38346488	38346823	(203846706)	C	MER1B	DNA/hAT-Charlie	(0)	339	3	1969036
3018	19.2	15.4	4.6	chr2	38739320	38740026	(203453503)	+	L1M4a2	LINE/L1	1344	2140	(516)	1969867
2468	8.1	0.3	0.3	chr2	39440417	39440723	(202752806)	+	AluSx	SINE/Alu	1	307	(5)	1971196
12	15.3	2.4	7.0	chr2	42493992	42494033	(199699496)	+	(CGG)n	Simple_repeat	1	43	(0)	1975681
828	27.6	12.2	2.8	chr2	42713689	42714276	(199479253)	C	L1ME4b	LINE/L1	(311)	581	2	1976204
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
30	27.1	1.2	0.0	chr2	43210845	43210924	(198982605)	+	(CA)n	Simple_repeat	1	81	(0)	1977114
11842	9.6	1.5	1.2	chr2	43284195	43285232	(198908297)	+	MSTA-int	LTR/ERVL-MaLR	597	1631	(0)	1977233
15	19.6	0.0	0.0	chr2	43371561	43371589	(198821940)	+	A-rich	Low_complexity	1	29	(0)	1977382
323	30.2	3.9	9.9	chr2	44372114	44372203	(197821326)	C	L1MEg1	LINE/L1	(6009)	226	150	1979109
1484	17.9	7.1	1.1	chr2	44372204	44372482	(197821047)	+	AluJo	SINE/Alu	2	298	(14)	1979113
323	30.2	3.9	9.9	chr2	44372483	44372582	(197820947)	C	L1MEg1	LINE/L1	(6086)	149	48	1979109
832	14.2	3.8	4.5	chr2	44501736	44501869	(197691660)	+	AluJo	SINE/Alu	136	268	(44)	1979311
1503	12.3	0.5	0.9	chr2	44502024	44502234	(197691295)	+	AluSx1	SINE/Alu	86	295	(17)	1979312
16	25.5	0.0	0.0	chr2	46873906	46873940	(195319589)	+	(TG)n	Simple_repeat	1	35	(0)	1982971
787	30.4	2.7	2.3	chr2	46973765	46974023	(195219506)	C	LTR38-int	LTR/ERV1	(1412)	374	115	1983177
3238	14.2	4.1	5.2	chr2	46974089	46974706	(195218823)	C	LTR36	LTR/ERV1	(0)	611	1	1983178
1879	9.7	4.7	1.9	chr2	47426317	47426584	(194766945)	C	AluSc	SINE/Alu	(33)	276	1	1984075
241	24.3	6.7	1.4	chr2	47426706	47426776	(194766753)	C	MER5A1	DNA/hAT-Charlie	(87)	79	5	1984076
28	0.0	0.0	0.0	chr2	47905403	47905429	(194288100)	+	(CCCG)n	Simple_repeat	1	27	(0)	1985041
62	27.1	0.0	0.0	chr2	47905518	47905677	(194287852)	+	(GGC)n	Simple_repeat	1	160	(0)	1985042
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
393	29.4	10.9	7.5	chr2	55112221	55112459	(187081070)	C	MIRb	SINE/MIR	(0)	268	21	1995315
13	16.2	0.0	0.0	chr2	60557856	60557883	(181635646)	+	(ATGA)n	Simple_repeat	1	28	(0)	2002587
310	5.1	0.0	0.0	chr2	61855355	61855393	(180338136)	C	Alu	SINE/Alu	(112)	190	152	2005332
662	7.6	0.0	0.0	chr2	61855395	61855473	(180338056)	+	AluSx3	SINE/Alu	204	282	(29)	2005333
2651	20.3	6.1	0.0	chr2	61855496	61856080	(180337449)	C	MER63C	DNA/hAT-Blackjack	(89)	841	219	2005334
1757	26.9	2.1	0.6	chr2	61960228	61960739	(180232790)	C	HERVIP10F-int	LTR/ERV1	(4)	7733	7214	2005565
418	25.3	3.9	3.1	chr2	61960812	61961069	(180232460)	C	HERVIP10FH-int	LTR/ERV1	(7508)	277	26	2005566
1104	23.9	7.4	2.4	chr2	61961097	61961488	(180232041)	C	LTR10C	LTR/ERV1	(62)	529	96	2005566
1015	28.2	8.2	2.5	chr2	62817098	62817705	(179375824)	C	L2a	LINE/L2	(1)	3374	2705	2007055
1171	29.8	9.5	4.1	chr2	63491028	63491705	(178701824)	C	HAL1	LINE/L1	(1341)	1166	449	2007928
381	28.9	13.4	2.6	chr2	63491773	63492045	(178701484)	C	HAL1	LINE/L1	(2197)	310	4	2007928
17	9.1	0.0	0.0	chr2	64018742	64018765	(178174764)	+	(A)n	Simple_repeat	1	24	(0)	2008680
16	21.0	4.7	3.0	chr2	64019027	64019090	(178174439)	+	(CGGCGCC)n	Simple_repeat	1	67	(0)	2008681
21	29.5	2.6	0.0	chr2	64019220	64019297	(178174232)	+	(CCG)n	Simple_repeat	1	80	(0)	2008682
2736	17.6	4.9	0.9	chr2	64695542	64696074	(177497455)	+	MER68	LTR/ERVL	9	563	(0)	2009780
279	29.6	5.6	1.9	chr2	64696102	64696256	(177497273)	C	L1MEf	LINE/L1	(5950)	450	290	2009772
442	27.8	4.3	2.0	chr2	64696288	64696489	(177497040)	C	L1MEf	LINE/L1	(6177)	223	17	2009772
433	23.3	0.0	0.0	chr2	64699662	64699734	(177493795)	+	FLAM_A	SINE/Alu	1	73	(69)	2009787
2309	11.1	0.8	1.4	chr2	64699771	64700134	(177493395)	+	THE1C	LTR/ERVL-MaLR	14	375	(0)	2009788
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
254	16.2	10.5	1.4	chr2	64951918	64951986	(177241543)	+	MamGypLTR1b	LTR/Gypsy	705	780	(2)	2010269
2180	12.7	0.3	0.7	chr2	65118470	65118777	(177074752)	C	AluSx3	SINE/Alu	(4)	307	1	2010605
12	20.4	0.0	0.0	chr2	65118826	65118854	(177074675)	+	(ATGT)n	Simple_repeat	1	29	(0)	2010606
1631	16.5	1.4	6.5	chr2	65118907	65119215	(177074314)	+	AluJb	SINE/Alu	1	293	(19)	2010607
2109	8.4	0.0	0.4	chr2	65119224	65119486	(177074043)	+	AluSx1	SINE/Alu	1	262	(50)	2010608
339	25.7	20.9	4.1	chr2	69326478	69326623	(172866906)	+	MER20B	DNA/hAT-Charlie	3	179	(604)	2016862
13	21.3	2.2	2.2	chr2	69643421	69643465	(172550064)	+	(GAGCCCG)n	Simple_repeat	1	46	(0)	2017441
1457	15.7	2.5	0.4	chr2	70110610	70110839	(172082690)	C	AluJo	SINE/Alu	(77)	235	1	2018404
2193	11.1	0.0	0.7	chr2	70110882	70111179	(172082350)	+	AluSz6	SINE/Alu	2	297	(15)	2018405
718	29.3	5.9	4.4	chr2	70738202	70738587	(171454942)	+	L1M6	LINE/L1	1	392	(6104)	2019530
481	29.7	3.7	2.1	chr2	71100061	71100246	(171093283)	C	MamRep605	LTR?	(127)	722	534	2020119
806	15.6	3.8	0.0	chr2	71447949	71448076	(170745453)	+	AluJo	SINE/Alu	1	133	(179)	2020655
985	30.4	14.2	12.2	chr2	71448077	71448527	(170745002)	C	L3	LINE/CR1	(3159)	940	448	2020653
575	17.2	19.3	11.5	chr2	71448586	71448854	(170744675)	C	MLT2B2	LTR/ERVL	(0)	515	221	2020656
2497	24.6	8.4	5.1	chr2	74119371	74120003	(168073526)	C	L1MC4	LINE/L1	(472)	7570	6889	2024825
2522	15.6	0.6	8.5	chr2	74179169	74179239	(168014290)	C	L1MB7	LINE/L1	(16)	6168	6101	2024932
2502	7.2	0.0	0.0	chr2	74510922	74511226	(167682303)	C	AluY	SINE/Alu	(6)	305	1	2025511
683	20.9	0.0	6.0	chr2	74511311	74511444	(167682085)	+	FLAM_A	SINE/Alu	5	130	(12)	2025512
12	22.1	0.0	0.0	chr2	74511661	74511692	(167681837)	+	(TTCA)n	Simple_repeat	1	32	(0)	2025513
2131	11.8	0.6	1.3	chr2	74511896	74512209	(167681320)	C	AluSx1	SINE/Alu	(0)	312	1	2025514
732	29.4	8.8	2.2	chr2	74705194	74705573	(167487956)	+	L1ME4a	LINE/L1	5540	5955	(169)	2025819
1817	17.1	0.0	1.0	chr2	74705574	74705866	(167487663)	C	AluJr	SINE/Alu	(22)	290	1	2025820
732	29.4	8.8	2.2	chr2	74705867	74706024	(167487505)	+	L1ME4a	LINE/L1	5956	6117	(7)	2025819
300	26.7	5.9	8.6	chr2	74820747	74820955	(167372574)	+	L1ME5	LINE/L1	5988	6190	(4)	2026034
1056	21.3	19.0	2.1	chr2	74821094	74821433	(167372096)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	2026035
16	18.9	0.0	0.0	chr2	84905056	84905085	(157288444)	+	(C)n	Simple_repeat	1	30	(0)	2039634
16	7.5	0.0	3.3	chr2	84905594	84905623	(157287906)	+	(GGCGG)n	Simple_repeat	1	30	(0)	2039635
278	30.9	4.5	0.0	chr2	84913389	84913472	(157280057)	C	L2b	LINE/L2	(1)	3374	3287	2039649
201	24.7	4.3	11.9	chr2	84925970	84926070	(157267459)	C	MER91C	DNA/hAT-Tip100	(31)	109	17	2039689
2059	11.4	4.3	0.0	chr2	84926401	84926690	(157266839)	C	AluSx1	SINE/Alu	(9)	303	1	2039690
187	14.3	0.0	0.0	chr2	84959730	84959757	(157233772)	+	MIR3	SINE/MIR	33	60	(148)	2039777
202	28.4	9.9	7.2	chr2	84959768	84959934	(157233595)	C	L2c	LINE/L2	(2)	3385	3214	2039778
255	31.7	1.0	2.9	chr2	84959944	84960047	(157233482)	C	MER5B	DNA/hAT-Charlie	(2)	176	75	2039779
324	22.1	1.4	14.8	chr2	85185422	85185525	(157008004)	C	MIR	SINE/MIR	(105)	157	67	2040271
2636	5.2	0.0	0.3	chr2	85185961	85186266	(157007263)	C	AluY	SINE/Alu	(6)	305	1	2040273
32	21.5	2.7	0.0	chr2	85418577	85418651	(156774878)	+	(CA)n	Simple_repeat	1	77	(0)	2040720
19	24.0	3.9	2.5	chr2	85437616	85437692	(156755837)	+	G-rich	Low_complexity	1	80	(0)	2040751
2381	10.0	0.6	0.3	chr2	85576560	85576870	(156616659)	C	AluSq2	SINE/Alu	(1)	312	1	2041074
778	10.2	0.0	2.8	chr2	85577195	85577302	(156616227)	+	FLAM_C	SINE/Alu	29	133	(10)	2041075
1029	15.3	24.7	10.0	chr2	88554191	88554386	(153639143)	+	Tigger3a	DNA/TcMar-Tigger	80	348	(0)	2046278
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
15	22.9	2.0	2.0	chr2	96265749	96265817	(145927712)	+	G-rich	Low_complexity	1	69	(0)	2051856
18	22.1	2.1	0.0	chr2	96266002	96266048	(145927481)	+	(TCC)n	Simple_repeat	1	48	(0)	2051857
26	19.8	5.3	0.0	chr2	96376247	96376321	(145817208)	+	(AATTTGC)n	Simple_repeat	1	79	(0)	2052033
293	32.7	8.3	2.3	chr2	96376323	96376538	(145816991)	+	LTR88b	LTR/Gypsy?	84	313	(524)	2052034
616	15.3	8.3	0.0	chr2	97664455	97664565	(144528964)	C	FLAM_A	SINE/Alu	(10)	132	12	2053940
1147	7.7	0.0	0.0	chr2	97664589	97664731	(144528798)	C	U4	snRNA	(2)	143	1	2053941
843	16.0	0.0	0.0	chr2	97664750	97664874	(144528655)	C	AluJo	SINE/Alu	(187)	125	1	2053942
3925	9.9	3.2	0.6	chr2	97711948	97712496	(144481033)	C	LTR6A	LTR/ERV1	(0)	564	1	2054036
17	10.4	3.2	0.0	chr2	97712786	97712816	(144480713)	+	(GGA)n	Simple_repeat	1	32	(0)	2054037
12	18.3	4.3	4.1	chr2	98730510	98730556	(143462973)	+	(GCCCCT)n	Simple_repeat	1	49	(0)	2055398
17	26.3	3.0	1.5	chr2	98730782	98730847	(143462682)	+	(CGCCCC)n	Simple_repeat	1	68	(0)	2055399
274	26.4	3.5	13.6	chr2	100971890	100971937	(141221592)	C	MER104	DNA/TcMar-Tc2	(2)	179	139	2058792
2285	11.6	0.0	1.9	chr2	100971938	100972247	(141221282)	C	AluSx1	SINE/Alu	(8)	304	1	2058793
921	22.7	14.3	0.9	chr2	101001331	101001650	(141191879)	+	HAL1	LINE/L1	1389	1758	(749)	2058832
2390	9.5	0.7	0.0	chr2	101043660	101043964	(141149565)	+	AluSq2	SINE/Alu	1	307	(6)	2058885
27	0.0	0.0	9.1	chr2	101151444	101151487	(141042042)	+	(GCCCC)n	Simple_repeat	1	44	(0)	2059059
1009	16.6	3.0	1.2	chr2	101309096	101309258	(140884271)	+	AluJb	SINE/Alu	132	297	(15)	2059377
16	0.0	0.0	0.0	chr2	101309276	101309292	(140884237)	+	(A)n	Simple_repeat	1	17	(0)	2059378
19	18.1	0.0	0.0	chr2	102356190	102356222	(139837307)	+	(T)n	Simple_repeat	1	33	(0)	2060973
14	18.3	2.7	0.0	chr2	102736724	102736760	(139456769)	+	(TCCTGTC)n	Simple_repeat	1	38	(0)	2061466
19	18.9	0.0	0.0	chr2	104844882	104844923	(137348606)	+	(CATG)n	Simple_repeat	1	42	(0)	2064055
19	16.9	8.8	1.4	chr2	104852476	104852543	(137340986)	+	(GGCTGCG)n	Simple_repeat	1	74	(0)	2064060
12	16.1	0.0	3.3	chr2	104853714	104853743	(137339786)	+	(TCCC)n	Simple_repeat	1	30	(0)	2064064
344	32.5	5.8	6.6	chr2	113240742	113241195	(128952334)	C	L2b	LINE/L2	(1)	3374	2925	2076473
12	15.3	3.5	0.0	chr2	118089600	118089628	(124103901)	+	(TCTT)n	Simple_repeat	1	30	(0)	2083166
2168	18.1	6.6	1.1	chr2	118675492	118675932	(123517597)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2084073
267	20.0	3.0	9.2	chr2	118675933	118676042	(123517487)	C	MIR3	SINE/MIR	(60)	148	60	2084072
308	35.3	11.6	0.0	chr2	120695959	120696179	(121497350)	C	MIRb	SINE/MIR	(3)	265	16	2087427
12	15.3	3.5	0.0	chr2	120735780	120735808	(121457721)	+	(GGCG)n	Simple_repeat	1	30	(0)	2087492
13	13.1	0.0	0.0	chr2	120735967	120735991	(121457538)	+	(GGC)n	Simple_repeat	1	25	(0)	2087493
18	0.0	0.0	0.0	chr2	121006396	121006415	(121187114)	+	(GA)n	Simple_repeat	1	20	(0)	2087880
281	29.4	10.9	3.6	chr2	121480822	121481100	(120712429)	+	MLT1K	LTR/ERVL-MaLR	289	590	(5)	2088745
2763	4.4	0.0	0.0	chr2	121531314	121531609	(120661920)	+	AluYe5	SINE/Alu	1	296	(14)	2088813
25	3.5	0.0	0.0	chr2	121649464	121649493	(120544036)	+	(A)n	Simple_repeat	1	30	(0)	2089035
1877	13.3	0.3	2.3	chr2	121650282	121650581	(120542948)	C	AluJb	SINE/Alu	(18)	294	1	2089036
256	26.4	2.7	1.4	chr2	121756187	121756259	(120437270)	+	L2a	LINE/L2	2834	2907	(512)	2089280
19	15.3	3.0	7.2	chr2	127050192	127050258	(115143271)	+	G-rich	Low_complexity	1	69	(0)	2096811
289	32.1	4.4	0.9	chr2	127062628	127062754	(115130775)	+	L4_A_Mam	LINE/RTE-X	4687	4836	(154)	2096827
364	25.3	12.9	0.0	chr2	127293105	127293266	(114900263)	+	Charlie19a	DNA/hAT-Charlie	145	330	(56)	2097199
31	21.5	0.0	0.0	chr2	127387386	127387447	(114806082)	+	(AC)n	Simple_repeat	1	62	(0)	2097356
15	19.3	4.1	2.0	chr2	127387975	127388023	(114805506)	+	(CGTCGCG)n	Simple_repeat	1	51	(0)	2097357
371	26.4	2.5	8.8	chr2	127407476	127407645	(114785884)	+	MER112	DNA/hAT-Charlie	3	161	(100)	2097394
43	25.2	5.0	3.3	chr2	127407870	127408069	(114785460)	+	(CCTCCT)n	Simple_repeat	1	210	(0)	2097395
723	17.3	14.0	1.5	chr2	127701028	127701232	(114492297)	C	L1MD1	LINE/L1	(0)	6242	6008	2097839
1200	23.1	5.2	5.5	chr2	131093833	131093944	(111099585)	C	LTR24B	LTR/ERV1	(81)	495	389	2102813
2351	8.4	1.0	0.3	chr2	131093945	131094242	(111099287)	C	AluSq2	SINE/Alu	(13)	300	1	2102814
28	16.7	0.0	0.0	chr2	134918469	134918522	(107275007)	+	(CCCTC)n	Simple_repeat	1	54	(0)	2108147
6865	16.5	4.7	2.1	chr2	135072211	135074671	(107118858)	C	MER83B-int	LTR/ERV1	(173)	4707	12	2108414
1638	14.0	12.1	7.9	chr2	135074672	135075027	(107118502)	C	MER83C	LTR/ERV1	(0)	373	1	2108414
314	29.4	12.3	7.9	chr2	135528054	135528141	(106665388)	+	MIR	SINE/MIR	11	95	(167)	2109145
1808	17.6	1.0	0.7	chr2	135528142	135528447	(106665082)	C	AluJb	SINE/Alu	(5)	307	1	2109146
1223	28.6	8.4	5.8	chr2	138291344	138291944	(103901585)	C	Charlie2b	DNA/hAT-Charlie	(2157)	625	8	2113232
346	38.0	11.4	2.3	chr2	138292020	138292418	(103901111)	C	L2	LINE/L2	(436)	2983	2544	2113235
13	23.8	2.2	2.1	chr2	138780391	138780436	(103413093)	+	G-rich	Low_complexity	1	47	(0)	2113952
18	20.3	2.2	0.0	chr2	142130769	142130813	(100062716)	+	(CGG)n	Simple_repeat	1	46	(0)	2118372
19	3.2	2.8	5.4	chr2	142131740	142131781	(100061748)	+	(GTTTT)n	Simple_repeat	1	40	(0)	2118373
25	22.5	2.9	1.4	chr2	144516344	144516412	(97677117)	+	(TC)n	Simple_repeat	1	71	(0)	2121493
12	30.9	1.6	1.6	chr2	144516844	144516904	(97676625)	+	(CCGCCC)n	Simple_repeat	1	62	(0)	2121494
19	22.7	4.5	4.3	chr2	144516939	144517027	(97676502)	+	G-rich	Low_complexity	1	93	(0)	2121495
15	0.0	0.0	0.0	chr2	144517172	144517190	(97676339)	+	(CGC)n	Simple_repeat	1	19	(0)	2121496
11	24.0	4.5	0.0	chr2	144848394	144848437	(97345092)	+	A-rich	Low_complexity	1	46	(0)	2121917
22631	3.1	0.2	0.1	chr2	146405742	146411341	(95782188)	+	L1PA2	LINE/L1	127	6155	(0)	2123879
22	10.5	0.0	0.0	chr2	148623170	148623200	(93570329)	+	(A)n	Simple_repeat	1	31	(0)	2126894
2432	9.8	1.3	0.0	chr2	148640288	148640593	(93552936)	+	AluSg	SINE/Alu	1	310	(0)	2126927
12	17.0	6.9	4.8	chr2	149330474	149330531	(92862998)	+	(CCGCGG)n	Simple_repeat	1	62	(0)	2127920
2324	6.9	3.9	6.6	chr2	151409228	151409547	(90783982)	C	AluSx	SINE/Alu	(1)	311	1	2130855
193	32.4	10.2	1.9	chr2	151409614	151409720	(90783809)	+	MIRc	SINE/MIR	22	138	(130)	2130856
21	9.5	0.0	0.0	chr2	151409773	151409806	(90783723)	+	(GGGAA)n	Simple_repeat	1	34	(0)	2130857
854	24.0	10.6	3.8	chr2	152116077	152116392	(90077137)	C	MLT1C	LTR/ERVL-MaLR	(52)	415	76	2131890
1099	17.9	9.0	5.3	chr2	152116393	152116421	(90077108)	+	MER44A	DNA/TcMar-Tigger	1	21	(318)	2131891
2308	9.5	1.0	0.0	chr2	152116422	152116715	(90076814)	C	AluSq2	SINE/Alu	(16)	297	1	2131892
426	26.5	13.3	3.9	chr2	152176579	152176759	(90016770)	+	L2a	LINE/L2	3196	3421	(5)	2131992
408	30.1	8.8	3.7	chr2	152746486	152746647	(89446882)	+	MIRb	SINE/MIR	4	174	(94)	2132870
1917	14.7	1.9	2.6	chr2	152746818	152747129	(89446400)	C	AluJo	SINE/Alu	(2)	310	1	2132871
569	17.4	0.0	3.2	chr2	153509013	153509137	(88684392)	C	MER61-int	LTR/ERV1	(463)	4754	4634	2133808
805	22.9	0.4	6.3	chr2	153509139	153509439	(88684090)	C	MER52D	LTR/ERV1	(1374)	749	496	2133815
478	8.9	3.2	2.2	chr2	153872338	153872429	(88321100)	+	LTR12D	LTR/ERV1	292	384	(870)	2134207
12	17.5	0.0	5.6	chr2	153872944	153872979	(88320550)	+	(TTTC)n	Simple_repeat	1	36	(0)	2134208
20	16.4	0.0	0.0	chr2	156332922	156332955	(85860574)	+	(T)n	Simple_repeat	1	34	(0)	2137288
17	4.9	0.0	0.0	chr2	156333341	156333361	(85860168)	+	(TC)n	Simple_repeat	1	21	(0)	2137289
2826	25.5	4.5	1.2	chr2	158410126	158411906	(83781623)	C	L1MA9	LINE/L1	(3765)	3396	1576	2140108
625	30.6	8.7	5.1	chr2	158411960	158412410	(83781119)	C	L1MA9	LINE/L1	(6699)	469	1	2140108
558	32.8	7.1	1.9	chr2	159215728	159216140	(82977389)	C	L1ME3B	LINE/L1	(301)	5941	5506	2141269
320	31.4	5.5	0.0	chr2	159216157	159216309	(82977220)	C	L1ME3B	LINE/L1	(827)	5415	5254	2141269
23	11.2	0.0	0.0	chr2	160257693	160257731	(81935798)	+	(AAAC)n	Simple_repeat	1	39	(0)	2142830
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
308	29.5	12.4	3.7	chr2	163968745	163968934	(78224595)	C	HAL1	LINE/L1	(1622)	885	677	2147688
27	21.4	2.0	5.8	chr2	164621483	164621593	(77571936)	+	G-rich	Low_complexity	1	106	(0)	2148539
189	21.8	9.8	1.8	chr2	164879969	164880024	(77313505)	+	L3	LINE/CR1	154	214	(3885)	2148922
645	22.9	0.6	9.4	chr2	165474187	165474420	(76719109)	C	AluJo	SINE/Alu	(0)	312	127	2149705
210	23.1	0.0	0.0	chr2	165474564	165474602	(76718927)	C	MIR	SINE/MIR	(116)	146	108	2149706
36	0.0	0.0	0.0	chr2	165953652	165953685	(76239844)	+	(CCCGCTCA)n	Simple_repeat	1	34	(0)	2150388
28	6.0	0.0	0.0	chr2	168247055	168247089	(73946440)	+	(A)n	Simple_repeat	1	35	(0)	2153271
30	0.0	0.0	0.0	chr2	168247287	168247314	(73946215)	+	(GCCGGG)n	Simple_repeat	1	28	(0)	2153272
26	25.8	0.0	0.0	chr2	168247320	168247388	(73946141)	+	(GCC)n	Simple_repeat	1	69	(0)	2153273
24	17.2	0.0	6.1	chr2	168247506	168247571	(73945958)	+	(CGC)n	Simple_repeat	1	66	(0)	2153274
17	26.2	4.0	2.5	chr2	168247582	168247671	(73945858)	+	GA-rich	Low_complexity	1	91	(0)	2153275
17	11.3	2.4	4.7	chr2	168247729	168247770	(73945759)	+	(CCGCTC)n	Simple_repeat	1	43	(0)	2153276
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
335	29.4	5.3	7.9	chr2	168572695	168572908	(73620621)	+	L2c	LINE/L2	3180	3387	(0)	2153765
445	16.3	0.0	0.0	chr2	168573105	168573190	(73620339)	+	L1PB1	LINE/L1	6053	6138	(13)	2153766
2212	10.6	0.0	2.0	chr2	168637197	168637497	(73556032)	+	AluSx3	SINE/Alu	2	296	(15)	2153851
2349	12.0	0.6	1.6	chr2	168829305	168829620	(73363909)	C	AluSq2	SINE/Alu	(0)	313	1	2154139
1367	32.5	9.4	3.6	chr2	168921450	168921846	(73271683)	C	HAL1	LINE/L1	(1418)	1089	696	2154271
2564	5.0	2.9	0.3	chr2	168921847	168922148	(73271381)	C	AluY	SINE/Alu	(1)	310	1	2154273
4505	23.6	10.5	4.3	chr2	169200266	169201392	(72992137)	+	L1MC5a	LINE/L1	1309	2542	(235)	2154633
184	19.7	24.8	1.3	chr2	169584078	169584154	(72609375)	+	L2c	LINE/L2	3281	3381	(6)	2155223
2172	20.8	3.2	2.6	chr2	170222331	170222794	(71970735)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2156308
51	25.7	3.3	3.6	chr2	170770826	170771037	(71422492)	+	(GCCCCC)n	Simple_repeat	1	219	(0)	2157212
1329	22.1	6.8	3.6	chr2	171439021	171439610	(70753919)	C	L1MCa	LINE/L1	(4781)	1879	1160	2158430
17	15.9	8.6	1.6	chr2	171894270	171894327	(70299202)	+	(GCGCGCC)n	Simple_repeat	1	63	(0)	2159210
1262	16.3	2.5	4.9	chr2	171955163	171955329	(70238200)	+	MLT1D-int	LTR/ERVL-MaLR	1	166	(1205)	2159342
2314	10.4	0.3	1.3	chr2	171955330	171955645	(70237884)	+	AluSq2	SINE/Alu	1	313	(0)	2159343
1262	16.3	2.5	4.9	chr2	171955646	171955761	(70237768)	+	MLT1D-int	LTR/ERVL-MaLR	167	277	(1094)	2159342
2335	8.6	0.0	0.7	chr2	171955764	171956053	(70237476)	+	AluSg	SINE/Alu	2	289	(21)	2159344
343	27.8	8.6	10.4	chr2	173076036	173076236	(69117293)	C	L1M4b	LINE/L1	(6211)	656	460	2161104
728	29.8	11.1	6.8	chr2	173834346	173835255	(68358274)	+	HAL1	LINE/L1	78	1031	(1476)	2162254
371	34.1	7.8	1.2	chr2	174603096	174603347	(67590182)	+	MLT1K	LTR/ERVL-MaLR	339	608	(2)	2163557
316	34.3	6.6	4.1	chr2	174603350	174603644	(67589885)	+	MLT1K-int	LTR/ERVL-MaLR	1	303	(1084)	2163557
21	25.1	1.4	2.8	chr2	175004769	175004839	(67188690)	+	(GCCCC)n	Simple_repeat	1	72	(0)	2164157
22	21.7	2.4	4.8	chr2	175004840	175004848	(67188681)	+	(CGCCCC)n	Simple_repeat	3	84	(0)	2164158
23	15.6	3.2	4.6	chr2	175005224	175005286	(67188243)	+	(GGC)n	Simple_repeat	1	65	(0)	2164159
2207	8.3	0.0	0.0	chr2	175758748	175759024	(66434505)	C	L1PB1	LINE/L1	(1)	6150	5874	2165192
969	24.0	0.9	3.6	chr2	175759025	175759228	(66434301)	C	AluJb	SINE/Alu	(25)	287	87	2165191
2808	10.3	3.0	0.2	chr2	175990120	175990539	(66202990)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2165493
20	15.1	2.2	2.1	chr2	176080615	176080660	(66112869)	+	(GCC)n	Simple_repeat	1	47	(0)	2165642
2491	24.4	8.9	3.6	chr2	176362733	176363799	(65829730)	+	L1ME1	LINE/L1	5055	6179	(0)	2166013
320	28.1	6.9	2.4	chr2	176363922	176364045	(65829484)	C	MER102c	DNA/hAT-Charlie	(0)	331	202	2166016
37	15.4	1.5	0.0	chr2	176566075	176566140	(65627389)	+	(CA)n	Simple_repeat	1	67	(0)	2166331
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
821	33.8	4.8	2.9	chr2	178008644	178009054	(64184475)	+	MamRTE1	LINE/RTE-BovB	3176	3594	(218)	2168413
6347	14.1	6.3	1.8	chr2	179899817	179900990	(62292539)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	1	2170791
17	18.6	3.3	4.8	chr2	181891634	181891693	(60301836)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2173261
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
25	26.4	0.0	4.4	chr2	181891943	181891962	(60301567)	+	(CCCTCC)n	Simple_repeat	2	90	(0)	2173263
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
16	26.1	3.4	0.0	chr2	186590241	186590299	(55603230)	+	G-rich	Low_complexity	1	61	(0)	2179278
291	30.4	2.1	2.1	chr2	192166739	192166879	(50026650)	+	MER103C	DNA/hAT-Charlie	1	141	(156)	2186893
445	27.1	0.0	0.0	chr2	192166910	192166994	(50026535)	C	MER81	DNA/hAT-Blackjack	(29)	85	1	2186894
1995	15.9	1.4	0.3	chr2	195604443	195604725	(46588804)	+	AluJb	SINE/Alu	1	286	(26)	2191180
26	21.6	1.8	0.0	chr2	195604726	195604781	(46588748)	+	(TA)n	Simple_repeat	1	57	(0)	2191181
2568	15.8	0.9	0.2	chr2	195604782	195605213	(46588316)	C	L1M2	LINE/L1	(581)	5710	5276	2191182
13	13.2	6.7	4.2	chr2	196593438	196593482	(45600047)	+	(CCGCGGTG)n	Simple_repeat	1	48	(0)	2192634
13	25.0	2.0	2.0	chr2	196593698	196593746	(45599783)	+	(GGCTGA)n	Simple_repeat	1	50	(0)	2192635
181	31.6	6.9	0.0	chr2	196593880	196593974	(45599555)	+	MIRc	SINE/MIR	121	222	(46)	2192636
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
982	30.6	1.9	5.2	chr2	199975148	199975626	(42217903)	C	MLT1J	LTR/ERVL-MaLR	(24)	488	26	2197633
1848	15.0	0.3	5.8	chr2	199975786	199976098	(42217431)	C	AluJb	SINE/Alu	(16)	296	1	2197634
14	19.9	2.4	2.3	chr2	200306622	200306663	(41886866)	+	(GGCG)n	Simple_repeat	1	43	(0)	2198136
22	24.2	2.6	6.7	chr2	200306780	200306895	(41886634)	+	(CGGCCC)n	Simple_repeat	1	119	(0)	2198137
11	24.9	2.0	3.9	chr2	200307261	200307311	(41886218)	+	(CGCCCG)n	Simple_repeat	1	52	(0)	2198138
958	26.8	9.3	3.5	chr2	201231609	201232072	(40961457)	+	L1M5	LINE/L1	5287	5780	(344)	2199791
382	14.2	4.1	2.4	chr2	201232110	201232223	(40961306)	C	LTR41C	LTR/ERVL	(6)	752	609	2199793
825	20.3	12.5	5.8	chr2	201232239	201232551	(40960978)	C	LTR41C	LTR/ERVL	(364)	337	1	2199793
613	11.8	10.5	0.0	chr2	201253564	201253665	(40939864)	+	L1MB3	LINE/L1	6065	6178	(5)	2199841
2412	7.4	0.7	0.0	chr2	201253801	201254097	(40939432)	+	AluSp	SINE/Alu	1	299	(14)	2199842
1906	12.8	4.5	0.3	chr2	203238449	203238566	(38954963)	C	AluJb	SINE/Alu	(193)	119	2	2203558
552	20.3	1.1	18.4	chr2	203238567	203238642	(38954887)	C	MER5A	DNA/hAT-Charlie	(112)	77	4	2203557
12	20.8	4.3	2.1	chr2	203534996	203535041	(38658488)	+	(GGAGGCG)n	Simple_repeat	1	48	(0)	2204167
46	0.0	0.0	0.0	chr2	203535259	203535300	(38658229)	+	(TGAC)n	Simple_repeat	1	42	(0)	2204168
33	12.7	1.6	1.6	chr2	203535304	203535365	(38658164)	+	(GGC)n	Simple_repeat	1	63	(0)	2204169
31	25.4	4.6	2.2	chr2	203535450	203535580	(38657949)	+	(CCGCCCG)n	Simple_repeat	1	137	(0)	2204170
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
29	7.2	2.3	0.0	chr2	204545612	204545655	(37647874)	+	(GCCAGG)n	Simple_repeat	1	45	(0)	2205786
326	23.5	13.1	4.0	chr2	204545685	204545808	(37647721)	C	L1MDb	LINE/L1	(5718)	691	555	2205787
15	21.0	3.9	1.9	chr2	206085225	206085275	(36108254)	+	(CCCGG)n	Simple_repeat	1	53	(0)	2207943
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
26	0.0	0.0	0.0	chr2	206229913	206229937	(35963592)	+	(GCTGGG)n	Simple_repeat	1	25	(0)	2208272
654	29.5	5.3	7.6	chr2	206230450	206230819	(35962710)	+	LTR88c	LTR/Gypsy?	4	364	(498)	2208273
14	18.8	0.0	0.0	chr2	206274569	206274599	(35918930)	+	G-rich	Low_complexity	1	31	(0)	2208373
14	15.8	4.3	4.2	chr2	206274955	206275000	(35918529)	+	G-rich	Low_complexity	1	48	(0)	2208374
442	29.6	13.2	7.5	chr2	207121378	207121618	(35071911)	C	MIRb	SINE/MIR	(10)	258	2	2209577
476	30.5	10.6	5.0	chr2	207618900	207619120	(34574409)	+	MIRb	SINE/MIR	26	260	(8)	2210323
17	18.4	0.0	0.0	chr2	207619174	207619204	(34574325)	+	(T)n	Simple_repeat	1	31	(0)	2210324
13	14.6	0.0	8.9	chr2	208255121	208255165	(33938364)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	2211597
1773	13.6	1.7	6.7	chr2	208255695	208256010	(33937519)	C	AluJb	SINE/Alu	(10)	302	3	2211598
841	21.8	8.0	5.4	chr2	214062891	214063205	(28130324)	C	MER33	DNA/hAT-Charlie	(0)	324	1	2219080
1033	29.5	14.9	7.4	chr2	214063206	214063287	(28130242)	+	L2a	LINE/L2	2964	3043	(376)	2219078
1697	19.5	7.6	1.1	chr2	214063297	214063664	(28129865)	C	MLT1A1	LTR/ERVL-MaLR	(14)	394	1	2219081
197	31.6	14.0	0.0	chr2	214781567	214781664	(27411865)	+	L2c	LINE/L2	3193	3306	(81)	2220072
309	20.8	11.5	0.0	chr2	214781667	214781743	(27411786)	C	L2a	LINE/L2	(0)	3426	3340	2220073
904	21.4	1.1	0.6	chr2	215984372	215984544	(26208985)	+	AluJo	SINE/Alu	136	309	(3)	2221951
852	26.6	12.9	2.1	chr2	215984624	215984996	(26208533)	+	Helitron1Na_Mam	RC/Helitron	517	935	(127)	2221949
596	30.2	3.6	11.7	chr2	217195455	217195722	(24997807)	C	MIRb	SINE/MIR	(0)	268	12	2224045
260	28.5	11.8	8.3	chr2	218085392	218085571	(24107958)	+	HAL1	LINE/L1	1	187	(2320)	2225455
1907	27.8	9.7	4.0	chr2	218085718	218087172	(24106357)	+	HAL1	LINE/L1	624	2164	(343)	2225455
1787	15.7	2.3	1.0	chr2	218215338	218215637	(23977892)	+	AluJb	SINE/Alu	1	304	(8)	2225664
2254	9.2	0.7	0.3	chr2	218215638	218215931	(23977598)	+	AluSx1	SINE/Alu	1	295	(17)	2225665
5582	16.0	6.7	4.9	chr2	223040639	223041547	(19151982)	+	L1M4	LINE/L1	4920	5877	(767)	2233621
12	12.0	3.7	0.0	chr2	223041906	223041932	(19151597)	+	(TTTTA)n	Simple_repeat	1	28	(0)	2233625
122	17.3	0.4	1.6	chr2	223041926	223041939	(19151590)	+	(TTTC)n	Simple_repeat	1	14	(0)	2233626
41	0.0	2.4	0.0	chr2	223041940	223041980	(19151549)	+	(CCTT)n	Simple_repeat	1	42	(0)	2233627
298	33.1	6.7	5.3	chr2	223092079	223092359	(19101170)	+	L2	LINE/L2	2470	2754	(665)	2233721
567	22.3	1.9	10.8	chr2	223092598	223092828	(19100701)	+	MamTip1	DNA/hAT-Tip100	58	267	(0)	2233722
230	40.6	5.7	3.7	chr2	224310843	224311167	(17882362)	+	L3	LINE/CR1	1268	1599	(2500)	2235704
234	34.2	1.3	2.6	chr2	224311401	224311540	(17881989)	+	L2c	LINE/L2	2925	3063	(324)	2235705
226	23.7	1.5	16.6	chr2	224311542	224311614	(17881915)	+	L1ME1	LINE/L1	4269	4328	(1818)	2235706
2349	9.9	0.0	3.3	chr2	224311615	224311917	(17881612)	+	AluSq2	SINE/Alu	1	293	(20)	2235707
18	9.6	1.9	9.1	chr2	229408395	229408449	(12785080)	+	(CTCTCCC)n	Simple_repeat	1	51	(0)	2243489
371	26.6	0.9	5.8	chr2	230723624	230723743	(11469786)	+	LTR33A	LTR/ERVL	84	197	(323)	2245592
2186	12.0	0.7	1.0	chr2	230723962	230724262	(11469267)	+	AluSz	SINE/Alu	1	300	(12)	2245593
228	38.2	2.6	0.9	chr2	232012192	232012302	(10181227)	C	L2c	LINE/L2	(0)	3375	3263	2248068
2051	26.7	10.6	6.4	chr2	233153423	233154148	(9039381)	+	HAL1	LINE/L1	95	912	(1595)	2250001
2062	11.5	0.0	0.0	chr2	233154149	233154418	(9039111)	C	AluSq2	SINE/Alu	(13)	300	31	2250002
3868	17.4	1.5	3.3	chr2	234074614	234075278	(8118251)	C	Tigger17a	DNA/TcMar-Tigger	(1)	653	1	2251335
307	31.5	16.1	3.0	chr2	235639021	235639459	(6554070)	C	L2	LINE/L2	(733)	2686	2180	2253936
539	22.6	8.7	8.3	chr2	235949508	235949724	(6243805)	C	Tigger8	DNA/TcMar-Tigger	(206)	461	244	2254305
328	32.7	6.6	6.6	chr2	236473058	236473358	(5720171)	C	MARNA	DNA/TcMar-Mariner	(224)	362	62	2255051
13	22.9	2.1	4.2	chr2	237291388	237291434	(4902095)	+	(TTCTC)n	Simple_repeat	1	48	(0)	2256186
1105	25.4	13.5	3.1	chr2	237636130	237636705	(4556824)	C	HAL1	LINE/L1	(1054)	1453	809	2256630
198	27.3	2.9	4.3	chr2	237636816	237636884	(4556645)	C	MIR	SINE/MIR	(188)	74	7	2256635
1232	14.2	2.7	4.0	chr2	237866550	237866723	(4326806)	C	Tigger2	DNA/TcMar-Tigger	(4)	2714	2543	2256967
2185	13.8	0.0	0.0	chr2	237866724	237867028	(4326501)	C	AluSx1	SINE/Alu	(7)	305	1	2256968
17	15.7	4.7	0.0	chr2	238289204	238289246	(3904283)	+	(CGGCCAG)n	Simple_repeat	1	45	(0)	2257600
25	13.2	3.9	0.0	chr2	238289266	238289316	(3904213)	+	(TTCA)n	Simple_repeat	1	53	(0)	2257601
184	32.3	8.9	4.7	chr2	238466590	238466761	(3726768)	+	L2c	LINE/L2	3101	3280	(107)	2257852
512	18.1	0.0	0.0	chr2	241338509	241338591	(854938)	+	FLAM_A	SINE/Alu	41	123	(19)	2260999
13	9.9	2.6	7.7	chr2	241701999	241702036	(491493)	+	(CCGC)n	Simple_repeat	1	39	(0)	2261584
39	0.0	0.0	0.0	chr2	241844036	241844071	(349458)	+	(CGGGGGCG)n	Simple_repeat	1	36	(0)	2261779
214	24.7	16.7	0.0	chr20	1194300	1194384	(63249783)	+	L2b	LINE/L2	3247	3348	(27)	2264585
180	22.2	1.8	8.5	chr20	1194552	1194610	(63249557)	C	MIRc	SINE/MIR	(134)	134	80	2264586
280	33.2	9.3	3.1	chr20	2593635	2594025	(61850142)	+	L2	LINE/L2	2665	3082	(337)	2267243
14	24.4	0.0	2.2	chr20	2652173	2652218	(61791949)	+	G-rich	Low_complexity	1	46	(0)	2267366
22	10.7	0.0	4.5	chr20	3805791	3805834	(60638333)	+	(GGAT)n	Simple_repeat	1	44	(0)	2269526
254	29.2	4.4	4.3	chr20	3820017	3820109	(60624058)	+	MER5A	DNA/hAT-Charlie	87	173	(5)	2269562
13	23.8	2.2	2.1	chr20	3820503	3820548	(60623619)	+	(GCGC)n	Simple_repeat	1	47	(0)	2269563
14	25.6	1.9	1.9	chr20	4636896	4636948	(59807219)	+	GA-rich	Low_complexity	1	54	(0)	2271057
14028	12.9	5.0	2.8	chr20	6026343	6026513	(58417654)	+	Tigger1	DNA/TcMar-Tigger	2209	2417	(1)	2273722
653	29.2	9.1	3.1	chr20	6026514	6026704	(58417463)	C	HAL1	LINE/L1	(1533)	974	771	2273721
1249	19.3	3.2	7.8	chr20	6026903	6027082	(58417085)	C	MER58B	DNA/hAT-Charlie	(2)	339	160	2273725
24	9.7	0.0	0.0	chr20	9838172	9838223	(54605944)	+	(CA)n	Simple_repeat	1	52	(0)	2279556
480	26.5	7.7	2.2	chr20	16747457	16747591	(47696576)	+	L2a	LINE/L2	3283	3425	(1)	2289880
185	28.2	20.2	0.0	chr20	16747747	16747817	(47696350)	+	OldhAT1	DNA/hAT-Ac	2703	2791	(57)	2289881
14	20.5	0.0	2.4	chr20	19758513	19758553	(44685614)	+	G-rich	Low_complexity	1	41	(0)	2294580
777	11.8	1.6	6.3	chr20	20003430	20003556	(44440611)	+	AluJr	SINE/Alu	181	301	(11)	2295024
16	25.6	0.0	4.9	chr20	20364443	20364503	(44079664)	+	(GCGG)n	Simple_repeat	1	61	(0)	2295536
269	30.4	3.2	0.0	chr20	23550998	23551089	(40893078)	C	LTR16C	LTR/ERVL	(18)	471	377	2299879
3115	19.6	5.2	8.7	chr20	23627014	23628086	(40816081)	C	L1MB8	LINE/L1	(0)	6178	5171	2299942
2263	9.3	0.0	0.0	chr20	25230661	25230950	(39213217)	+	AluSx4	SINE/Alu	1	290	(20)	2301867
16	23.1	1.6	4.8	chr20	25354323	25354383	(39089784)	+	(AGGC)n	Simple_repeat	1	62	(0)	2302019
13	23.0	5.6	4.0	chr20	25390236	25390306	(39053861)	+	(GCAGG)n	Simple_repeat	1	75	(0)	2302096
18	25.3	1.3	5.1	chr20	25390705	25390781	(39053386)	+	(CCG)n	Simple_repeat	1	78	(0)	2302097
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
235	34.2	8.3	5.2	chr20	25622667	25623014	(38821153)	C	L2c	LINE/L2	(1339)	2080	1721	2302498
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
24	25.8	0.0	2.6	chr20	30290568	30290644	(34153523)	+	G-rich	Low_complexity	1	77	(0)	2304833
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
15	12.2	0.0	0.0	chr20	32031236	32031262	(32412905)	+	(CGA)n	Simple_repeat	1	27	(0)	2307467
185	26.5	0.0	3.9	chr20	32031723	32031773	(32412394)	C	MIR1_Amn	SINE/MIR	(80)	150	102	2307468
3253	22.7	7.7	1.6	chr20	32179283	32180190	(32263977)	C	L1ME2	LINE/L1	(5400)	1687	721	2307829
43	0.0	0.0	0.0	chr20	32676125	32676161	(31768006)	+	(AC)n	Simple_repeat	1	37	(0)	2308985
270	24.5	27.8	1.5	chr20	32676458	32676718	(31767449)	C	L2b	LINE/L2	(0)	3387	3032	2308986
1380	18.2	5.6	0.0	chr20	33368296	33368459	(31075708)	C	AluJb	SINE/Alu	(14)	298	134	2310530
31	0.0	0.0	0.0	chr20	33368460	33368488	(31075679)	+	(T)n	Simple_repeat	1	29	(0)	2310531
514	31.8	2.0	2.4	chr20	33401075	33401325	(31042842)	C	MIR	SINE/MIR	(10)	252	3	2310617
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
378	23.6	12.9	4.2	chr20	33490712	33490901	(30953266)	+	MIRb	SINE/MIR	28	236	(32)	2310887
878	22.1	9.4	3.0	chr20	33866117	33866522	(30577645)	C	MLT1D	LTR/ERVL-MaLR	(0)	467	22	2311785
15	32.0	3.4	2.2	chr20	33993917	33994005	(30450162)	+	(GCG)n	Simple_repeat	1	92	(0)	2312095
14	31.0	0.0	6.0	chr20	33994284	33994315	(30449852)	+	(GCCCCC)n	Simple_repeat	1	57	(27)	2312096
12	19.3	0.0	5.1	chr20	33994316	33994354	(30449813)	+	(CCCGCCC)n	Simple_repeat	1	39	(0)	2312097
14	31.0	0.0	6.0	chr20	33994355	33994367	(30449800)	+	(GCCCCC)n	Simple_repeat	58	84	(0)	2312096
7077	19.4	13.4	3.4	chr20	34209142	34210714	(30233453)	+	MER52A	LTR/ERV1	1	1755	(0)	2312524
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
996	17.6	9.1	7.3	chr20	35955138	35955450	(28488717)	+	MER33	DNA/hAT-Charlie	2	320	(4)	2316478
279	22.9	4.1	13.0	chr20	35978082	35978174	(28465993)	+	L1ME3Cz	LINE/L1	590	672	(325)	2316548
1827	16.0	0.0	5.7	chr20	35978175	35978344	(28465823)	C	AluJb	SINE/Alu	(11)	301	144	2316549
2408	8.0	0.0	0.0	chr20	35978345	35978643	(28465524)	C	AluY	SINE/Alu	(12)	299	1	2316550
225	22.0	18.0	4.2	chr20	38110465	38110559	(26333608)	+	L3	LINE/CR1	3922	4032	(67)	2321401
598	25.0	9.9	4.2	chr20	38110574	38110811	(26333356)	C	MER102a	DNA/hAT-Charlie	(1)	329	77	2321402
13	18.8	0.0	0.0	chr20	38473102	38473132	(25971035)	+	(CCCTC)n	Simple_repeat	1	31	(0)	2322241
205	31.4	23.9	0.0	chr20	41253267	41253387	(23190780)	+	MIRb	SINE/MIR	52	210	(58)	2327232
316	27.1	6.1	1.8	chr20	43974668	43974776	(20469391)	C	L2c	LINE/L2	(4)	3383	3270	2332377
236	31.2	1.9	3.9	chr20	44211385	44211510	(20232657)	+	MIR3	SINE/MIR	37	155	(53)	2332915
181	28.6	1.8	0.0	chr20	44302242	44302297	(20141870)	+	L2c	LINE/L2	3320	3376	(11)	2333131
496	31.2	10.9	1.2	chr20	45015633	45015872	(19428295)	+	MIRb	SINE/MIR	2	267	(1)	2334859
387	28.6	4.3	0.0	chr20	45881480	45881591	(18562576)	+	MIRc	SINE/MIR	40	156	(112)	2336465
280	25.5	8.7	0.0	chr20	46688824	46688917	(17755250)	C	MIR	SINE/MIR	(127)	135	33	2338228
391	24.5	4.5	4.3	chr20	47175341	47175489	(17268678)	+	MIRb	SINE/MIR	30	172	(96)	2339398
1722	14.7	3.0	4.0	chr20	48945582	48945880	(15498287)	+	AluJb	SINE/Alu	1	296	(16)	2343267
2216	12.5	0.0	0.0	chr20	49279343	49279646	(15164521)	+	AluSx	SINE/Alu	1	304	(8)	2344008
203	15.2	0.0	0.0	chr20	49447512	49447544	(14996623)	+	L2c	LINE/L2	3337	3369	(18)	2344443
550	28.0	2.8	3.9	chr20	49447562	49447743	(14996424)	+	MIRb	SINE/MIR	42	221	(47)	2344444
12	17.6	0.0	0.0	chr20	49447769	49447795	(14996372)	+	(TCTT)n	Simple_repeat	1	27	(0)	2344445
208	24.6	2.8	4.2	chr20	49447893	49447964	(14996203)	+	MIR3	SINE/MIR	111	181	(27)	2344446
406	30.4	10.3	3.6	chr20	49448088	49448476	(14995691)	+	MLT1K	LTR/ERVL-MaLR	160	577	(18)	2344447
369	31.9	15.3	0.7	chr20	50358102	50358401	(14085766)	+	L2	LINE/L2	2728	3079	(340)	2346716
209	34.6	8.3	6.1	chr20	50358564	50358618	(14085549)	+	L2b	LINE/L2	2977	3031	(356)	2346717
688	22.6	13.2	0.5	chr20	50358619	50358809	(14085358)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2346718
404	31.6	4.9	12.5	chr20	50358810	50359169	(14084998)	+	L2b	LINE/L2	3032	3360	(15)	2346717
764	23.9	0.6	0.0	chr20	50460209	50460367	(13983800)	+	MIR	SINE/MIR	13	172	(90)	2346996
838	20.1	3.2	0.0	chr20	50460474	50460652	(13983515)	+	MER20	DNA/hAT-Charlie	1	185	(34)	2346997
445	33.7	7.6	1.7	chr20	50511100	50511446	(13932721)	C	L2a	LINE/L2	(1)	3425	3057	2347141
570	17.9	15.2	0.0	chr20	50738815	50738920	(13705247)	C	AluJr	SINE/Alu	(187)	125	1	2347609
15	13.9	0.0	0.0	chr20	50738979	50739002	(13705165)	+	(TG)n	Simple_repeat	1	24	(0)	2347610
2081	10.7	3.1	0.0	chr20	50739165	50739444	(13704723)	+	AluSx	SINE/Alu	1	289	(23)	2347611
1015	28.2	10.8	2.3	chr20	51318124	51318649	(13125518)	+	MLT1G3	LTR/ERVL-MaLR	3	578	(17)	2348896
19	8.3	0.0	0.0	chr20	51594967	51594992	(12849175)	+	(T)n	Simple_repeat	1	26	(0)	2349466
695	33.8	12.0	4.8	chr20	52893623	52894247	(11549920)	+	L1M5	LINE/L1	4475	5150	(996)	2352380
1485	25.3	2.7	1.4	chr20	52894270	52894714	(11549453)	+	MLT1C	LTR/ERVL-MaLR	15	465	(2)	2352381
19	14.5	0.0	0.0	chr20	53595035	53595065	(10849102)	+	(A)n	Simple_repeat	1	31	(0)	2353819
303	19.1	6.0	6.0	chr20	56605502	56605601	(7838566)	+	MER5A1	DNA/hAT-Charlie	7	106	(60)	2359416
13	18.3	5.4	0.0	chr20	56925242	56925278	(7518889)	+	(GCG)n	Simple_repeat	1	39	(0)	2360189
1882	15.4	0.0	3.9	chr20	58919753	58920058	(5524109)	+	AluJb	SINE/Alu	1	294	(18)	2363629
521	24.2	14.6	8.1	chr20	58920090	58920207	(5523960)	C	MIR	SINE/MIR	(15)	247	108	2363630
2282	9.3	0.7	0.0	chr20	58920208	58920497	(5523670)	+	AluSx	SINE/Alu	1	292	(20)	2363631
345	29.4	1.0	0.0	chr20	62166059	62166160	(2278007)	C	MER63A	DNA/hAT-Blackjack	(70)	140	38	2368212
40	0.0	0.0	0.0	chr20	62805393	62805429	(1638738)	+	(CTGGGG)n	Simple_repeat	1	37	(0)	2368972
12	13.2	5.7	2.7	chr20	62805784	62805818	(1638349)	+	(GCAGG)n	Simple_repeat	1	37	(0)	2368973
229	33.8	5.2	1.0	chr20	63310587	63310737	(1133430)	+	MIRc	SINE/MIR	2	166	(96)	2369474
905	19.6	11.5	0.8	chr20	63310864	63311120	(1133047)	C	L1MB8	LINE/L1	(5)	6173	5886	2369475
537	20.7	2.9	3.6	chr20	63786323	63786462	(657705)	+	MER20	DNA/hAT-Charlie	49	187	(32)	2370026
2359	8.8	0.0	0.3	chr20	63786504	63786809	(657358)	C	AluSc	SINE/Alu	(4)	305	1	2370027
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
3392	22.5	10.9	1.1	chr21	8833986	8834421	(37875562)	+	L1MC4a	LINE/L1	6555	7036	(846)	2374034
2088	13.1	0.3	0.3	chr21	8834422	8834711	(37875272)	+	AluSz	SINE/Alu	1	290	(22)	2374035
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
2642	15.0	3.8	3.8	chr21	14084652	14085179	(32624804)	C	LSU-rRNA_Hsa	rRNA	(7)	5028	4501	2377346
27	3.5	0.0	0.0	chr21	15730357	15730386	(30979597)	+	(CGC)n	Simple_repeat	1	30	(0)	2379541
1162	28.3	3.2	1.5	chr21	30956762	30957156	(15752827)	C	MLT1L	LTR/ERVL-MaLR	(66)	544	143	2400510
221	32.7	0.0	8.3	chr21	31476634	31476753	(15233230)	C	MamRTE1	LINE/RTE-BovB	(1340)	2472	2363	2401426
270	14.9	16.2	0.0	chr21	31477113	31477179	(15232804)	C	MADE2	DNA/TcMar-Mariner	(0)	80	1	2401427
33	17.4	1.4	1.4	chr21	31732160	31732232	(14977751)	+	(CGCCC)n	Simple_repeat	1	74	(0)	2401953
12	15.7	2.6	5.0	chr21	31732235	31732273	(14977710)	+	G-rich	Low_complexity	1	40	(0)	2401954
19	15.1	4.5	0.0	chr21	31732278	31732321	(14977662)	+	(CGG)n	Simple_repeat	1	46	(0)	2401955
462	32.6	0.7	0.0	chr21	33140206	33140352	(13569631)	C	MIRb	SINE/MIR	(95)	173	26	2404371
29	24.7	4.5	3.6	chr21	33229801	33229933	(13480050)	+	(GCCCGC)n	Simple_repeat	1	139	(0)	2404550
16	17.2	7.4	1.7	chr21	33230305	33230358	(13479625)	+	(TCC)n	Simple_repeat	1	58	(0)	2404551
14	28.2	4.7	0.0	chr21	33230359	33230368	(13479615)	+	(TCCCTC)n	Simple_repeat	1	67	(0)	2404552
14	15.3	0.0	0.0	chr21	33230490	33230518	(13479465)	+	(CACCC)n	Simple_repeat	1	29	(0)	2404553
2778	16.1	7.5	1.4	chr21	33361833	33362144	(13347839)	+	MER21B	LTR/ERVL	332	672	(196)	2404792
4120	12.7	2.5	0.0	chr21	33362145	33362773	(13347210)	C	LTR9D	LTR/ERV1	(0)	645	1	2404793
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
20	26.4	2.5	2.4	chr21	33588685	33588764	(13121219)	+	(CCCCCG)n	Simple_repeat	1	82	(0)	2405244
363	35.7	6.9	6.1	chr21	33715961	33716303	(12993680)	+	HAL1	LINE/L1	103	448	(2059)	2405508
538	26.9	2.7	5.2	chr21	33716484	33716714	(12993269)	+	HAL1	LINE/L1	663	887	(1620)	2405508
1867	7.7	6.4	0.0	chr21	33716716	33716949	(12993034)	+	AluSg	SINE/Alu	45	294	(16)	2405509
3510	7.5	1.5	0.0	chr21	34116590	34117040	(12592943)	C	LTR22A	LTR/ERVK	(0)	458	1	2406153
609	29.3	12.5	8.9	chr21	34774511	34774587	(11935396)	C	L1MEg	LINE/L1	(5991)	251	174	2407151
192	32.8	11.3	8.2	chr21	34857539	34857744	(11852239)	C	L3b	LINE/CR1	(67)	5165	4953	2407271
17	12.7	0.0	0.0	chr21	34888500	34888525	(11821458)	+	(A)n	Simple_repeat	1	26	(0)	2407308
14	20.9	3.2	6.2	chr21	34888816	34888877	(11821106)	+	(CGC)n	Simple_repeat	1	64	(0)	2407309
1302	20.0	12.4	5.7	chr21	36125394	36125681	(10584302)	+	MLT1C	LTR/ERVL-MaLR	184	466	(1)	2409186
335	20.7	14.2	6.9	chr21	36125684	36125813	(10584170)	C	Charlie17	DNA/hAT-Charlie	(2650)	266	126	2409174
1549	28.9	12.7	4.3	chr21	38850054	38852039	(7857944)	C	L1MEd	LINE/L1	(279)	2228	10	2413604
13	9.3	2.4	9.3	chr21	39313332	39313373	(7396610)	+	GA-rich	Low_complexity	1	43	(0)	2414333
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
16	24.9	0.0	0.0	chr21	39387664	39387701	(7322282)	+	(CC)n	Simple_repeat	1	38	(0)	2414498
1506	12.1	3.3	0.0	chr21	39830523	39830787	(6879196)	C	L1PB1	LINE/L1	(4743)	2120	1847	2415234
344	34.5	11.3	0.0	chr21	39830788	39831022	(6878961)	+	L2b	LINE/L2	2084	2348	(1071)	2415233
235	27.6	2.6	0.0	chr21	39831042	39831117	(6878866)	+	L2-1_AMi	LINE/L2	447	524	(711)	2415236
1258	10.1	0.6	0.0	chr21	41539967	41540134	(5169849)	+	AluSc	SINE/Alu	132	300	(9)	2417594
14	27.8	1.6	3.1	chr21	42010880	42010943	(4699040)	+	(GCGGCGG)n	Simple_repeat	1	65	(0)	2418308
334	23.2	3.5	0.0	chr21	42182626	42182707	(4527276)	C	L1MEi	LINE/L1	(1539)	673	589	2418554
17	0.0	3.6	3.5	chr21	42182874	42182901	(4527082)	+	(AGCCC)n	Simple_repeat	1	29	(0)	2418555
14	8.9	0.0	11.1	chr21	42219618	42219662	(4490321)	+	G-rich	Low_complexity	1	45	(0)	2418613
2222	11.0	0.0	0.7	chr21	42872653	42872951	(3837032)	+	AluSq2	SINE/Alu	1	297	(16)	2419466
280	20.9	1.5	0.0	chr21	44299424	44299490	(2410493)	C	L1ME3A	LINE/L1	(29)	6144	6077	2421589
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
27	8.8	1.4	9.5	chr21	44299996	44300068	(2409915)	+	G-rich	Low_complexity	1	74	(0)	2421591
37	23.7	3.5	3.4	chr21	46324510	46324674	(385309)	+	G-rich	Low_complexity	1	165	(0)	2423812
12	7.5	6.7	3.1	chr21	46324785	46324814	(385169)	+	(GCGCGG)n	Simple_repeat	1	32	(0)	2423813
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
786	20.2	9.4	4.3	chr22	17423533	17423922	(33394546)	C	L1MCa	LINE/L1	(6041)	467	8	2428967
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
15	4.8	0.0	0.0	chr22	19291658	19291679	(31526789)	+	(CGG)n	Simple_repeat	1	22	(0)	2431742
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
47	27.5	3.6	3.9	chr22	19431483	19431707	(31386761)	+	(GCC)n	Simple_repeat	1	233	(0)	2431996
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
20	21.7	2.9	2.9	chr22	20132116	20132183	(30686285)	+	G-rich	Low_complexity	1	70	(0)	2432945
254	13.8	4.4	9.7	chr22	20176604	20176675	(30641793)	+	MIR3	SINE/MIR	94	161	(47)	2432983
16	15.8	0.0	2.7	chr22	21735482	21735518	(29082950)	+	(GCCC)n	Simple_repeat	1	37	(0)	2435784
15	17.2	2.0	5.8	chr22	21735618	21735668	(29082800)	+	(CGCCCCG)n	Simple_repeat	1	52	(0)	2435785
17	20.7	5.7	2.7	chr22	21735873	21735942	(29082526)	+	(CCCGCCT)n	Simple_repeat	1	74	(0)	2435786
20	8.8	0.0	5.0	chr22	21736077	21736116	(29082352)	+	(GGGGC)n	Simple_repeat	1	40	(0)	2435787
33	28.0	2.7	3.3	chr22	21867413	21867558	(28950910)	+	(CCG)n	Simple_repeat	1	150	(0)	2436079
12	9.8	0.0	0.0	chr22	21867625	21867646	(28950822)	+	(TGCC)n	Simple_repeat	1	22	(0)	2436080
19	24.2	1.7	1.6	chr22	21867648	21867707	(28950761)	+	G-rich	Low_complexity	1	61	(0)	2436081
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
12	15.1	2.3	6.8	chr22	21938425	21938467	(28880001)	+	(GAGCGA)n	Simple_repeat	1	44	(0)	2436248
28	14.3	1.5	4.4	chr22	21938582	21938648	(28879820)	+	A-rich	Low_complexity	1	68	(0)	2436249
543	25.0	5.7	3.9	chr22	22298631	22298795	(28519673)	C	L1MDa	LINE/L1	(3392)	3145	2971	2436730
1480	21.3	2.2	0.0	chr22	22298796	22299063	(28519405)	C	AluJr	SINE/Alu	(38)	274	1	2436731
28	3.0	2.9	0.0	chr22	23180571	23180604	(27637864)	+	(GGC)n	Simple_repeat	1	35	(0)	2437897
17	22.7	5.2	3.7	chr22	23180833	23180909	(27637559)	+	(CGC)n	Simple_repeat	1	81	(0)	2437898
589	29.4	4.2	7.0	chr22	23500540	23500802	(27317666)	C	MIR	SINE/MIR	(7)	255	6	2438382
12	21.6	5.3	3.3	chr22	23522607	23522663	(27295805)	+	(TGTTAC)n	Simple_repeat	1	60	(0)	2438434
18	10.4	2.1	6.2	chr22	23522720	23522766	(27295702)	+	G-rich	Low_complexity	1	48	(0)	2438435
291	32.9	6.1	4.3	chr22	23787518	23787679	(27030789)	C	Charlie19a	DNA/hAT-Charlie	(188)	198	34	2438973
914	13.6	0.0	0.0	chr22	23788042	23788173	(27030295)	C	FLAM_C	SINE/Alu	(11)	132	1	2438974
472	21.8	2.9	0.8	chr22	24088800	24088933	(26729535)	C	L1ME3Cz	LINE/L1	(328)	669	533	2439487
204	26.6	3.8	4.5	chr22	27405836	27405975	(23412493)	C	MIRc	SINE/MIR	(128)	140	1	2446614
298	26.0	5.0	4.0	chr22	27406156	27406255	(23412213)	C	MIR3	SINE/MIR	(31)	177	77	2446615
194	18.4	0.0	2.6	chr22	27406266	27406304	(23412164)	C	L2a	LINE/L2	(9)	3417	3380	2446616
421	24.8	13.8	0.0	chr22	27406278	27406402	(23412066)	C	MIRb	SINE/MIR	(16)	252	108	2446617
181	36.2	1.2	1.2	chr22	28054093	28054173	(22764295)	C	AmnSINE2	SINE/tRNA-Deu	(28)	330	250	2447910
1669	26.7	13.1	8.1	chr22	28188127	28189065	(22629403)	+	HAL1	LINE/L1	1	959	(1548)	2448109
874	12.2	3.2	0.8	chr22	28189066	28189188	(22629280)	+	AluJr	SINE/Alu	2	127	(185)	2448110
282	34.9	0.9	1.9	chr22	28678722	28678829	(22139639)	C	L2b	LINE/L2	(9)	3366	3260	2448921
25	27.8	3.2	5.5	chr22	28679779	28679936	(22138532)	+	(CGCGCCC)n	Simple_repeat	1	163	(0)	2448922
21	27.6	0.0	5.4	chr22	28800218	28800309	(22018159)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	2449228
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
743	7.7	0.0	0.0	chr22	28801003	28801093	(22017375)	+	AluSx3	SINE/Alu	211	301	(10)	2449230
28	17.9	5.5	2.0	chr22	29072948	29073031	(21745437)	+	G-rich	Low_complexity	1	86	(0)	2449835
1547	19.1	6.3	0.7	chr22	30115125	30115407	(20703061)	C	AluJb	SINE/Alu	(12)	300	1	2451969
182	31.3	2.9	0.0	chr22	30195879	30195945	(20622523)	C	L2	LINE/L2	(1676)	1743	1675	2452108
17	25.9	3.3	0.0	chr22	30196446	30196505	(20621963)	+	(CGCCAT)n	Simple_repeat	1	62	(0)	2452112
2134	13.0	0.0	1.6	chr22	30588496	30588802	(20229666)	+	AluSx1	SINE/Alu	1	302	(10)	2452955
20	8.8	2.8	0.0	chr22	30588956	30588991	(20229477)	+	(CCCAG)n	Simple_repeat	1	37	(0)	2452956
1521	18.7	7.3	0.0	chr22	31002703	31002969	(19815499)	+	AluJb	SINE/Alu	6	293	(19)	2453752
2039	10.5	2.1	2.1	chr22	31003348	31003633	(19814835)	+	AluSz	SINE/Alu	11	296	(16)	2453753
401	28.4	10.8	0.7	chr22	31273061	31273202	(19545266)	C	MIR3	SINE/MIR	(6)	202	45	2454415
270	24.4	6.5	4.2	chr22	32051254	32051373	(18767095)	+	MIR3	SINE/MIR	78	200	(8)	2456279
1848	19.7	0.0	0.0	chr22	32051375	32051679	(18766789)	+	AluJr4	SINE/Alu	2	306	(6)	2456280
18	18.1	3.9	1.9	chr22	33058470	33058521	(17759947)	+	(ACGCCC)n	Simple_repeat	1	54	(0)	2458292
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2314	9.2	0.0	0.3	chr22	33900765	33901056	(16917412)	+	AluSx	SINE/Alu	1	291	(21)	2460015
1526	21.4	3.9	9.3	chr22	33901057	33901378	(16917090)	+	MLT1C	LTR/ERVL-MaLR	183	467	(0)	2460014
494	26.0	3.0	0.8	chr22	36459841	36459972	(14358496)	+	MIR	SINE/MIR	9	143	(119)	2465104
273	26.1	0.0	0.0	chr22	36883220	36883288	(13935180)	+	L1ME3F	LINE/L1	1610	1678	(6285)	2466056
180	31.4	6.9	0.8	chr22	38315071	38315192	(12503276)	C	MIR1_Amn	SINE/MIR	(80)	150	21	2469240
14821	13.1	3.2	1.4	chr22	38358752	38361082	(12457386)	C	L1M1	LINE/L1	(3929)	3636	1253	2469354
17	12.2	4.0	5.8	chr22	38398524	38398573	(12419895)	+	GA-rich	Low_complexity	1	52	(0)	2469395
14	4.9	0.0	0.0	chr22	38570451	38570471	(12247997)	+	(GAGG)n	Simple_repeat	1	21	(0)	2469801
2389	10.1	0.0	0.0	chr22	39367541	39367846	(11450622)	+	AluSx	SINE/Alu	1	306	(6)	2471495
312	26.8	11.5	2.4	chr22	39367873	39368081	(11450387)	+	L2a	LINE/L2	2933	3161	(226)	2471496
639	26.6	6.0	2.9	chr22	39368173	39368381	(11450087)	C	MIR	SINE/MIR	(25)	237	22	2471497
13	14.5	3.2	0.0	chr22	39489051	39489081	(11329387)	+	(GGAGTG)n	Simple_repeat	1	32	(0)	2471751
710	30.7	5.5	4.5	chr22	39531892	39532288	(11286180)	+	L2b	LINE/L2	2951	3356	(31)	2471833
231	27.4	1.4	1.4	chr22	39792579	39792595	(11025873)	C	SVA_B	Retroposon/SVA	(1174)	209	193	2472332
638	10.5	0.0	0.0	chr22	39792596	39792671	(11025797)	+	AluJo	SINE/Alu	2	77	(235)	2472333
567	14.3	0.0	0.0	chr22	39792681	39792764	(11025704)	+	LTR8	LTR/ERV1	608	691	(0)	2472334
2608	16.1	1.4	0.9	chr22	39792765	39793289	(11025179)	C	L1MA4A	LINE/L1	(478)	5825	5294	2472335
690	25.3	4.9	0.0	chr22	40504233	40504386	(10314082)	+	AluJo	SINE/Alu	137	298	(14)	2473687
1923	19.9	0.0	0.3	chr22	40588700	40588996	(10229472)	+	AluJo	SINE/Alu	1	296	(16)	2473864
276	27.3	6.1	0.0	chr22	40602227	40602303	(10216165)	C	L2c	LINE/L2	(10)	3377	3296	2473891
2079	11.8	0.0	2.9	chr22	40602574	40602852	(10215616)	+	AluSx	SINE/Alu	18	288	(24)	2473892
1441	18.0	5.5	0.4	chr22	40855175	40855452	(9963016)	+	AluJr4	SINE/Alu	2	294	(18)	2474499
16	0.0	0.0	0.0	chr22	40856967	40856984	(9961484)	+	(A)n	Simple_repeat	1	18	(0)	2474500
13	10.5	6.5	0.0	chr22	41021799	41021829	(9796639)	+	G-rich	Low_complexity	1	33	(0)	2474932
185	23.5	3.8	5.6	chr22	41021974	41022027	(9796441)	+	MamRTE1	LINE/RTE-BovB	778	830	(2982)	2474933
301	30.0	1.2	0.0	chr22	41285358	41285437	(9533031)	C	MIR1_Amn	SINE/MIR	(80)	150	70	2475551
215	23.8	4.9	4.2	chr22	41285725	41285809	(9532659)	+	MIRc	SINE/MIR	69	150	(80)	2475552
1419	17.6	6.3	3.4	chr22	41300778	41301100	(9517368)	+	MER31A	LTR/ERV1	153	485	(0)	2475594
2446	4.6	0.0	0.0	chr22	41566660	41566943	(9251525)	+	AluYc	SINE/Alu	3	286	(13)	2476218
445	28.8	3.0	5.9	chr22	41566944	41567019	(9251449)	C	MIR	SINE/MIR	(169)	93	19	2476215
292	18.6	0.0	3.3	chr22	42071333	42071393	(8747075)	C	L2a	LINE/L2	(1)	3425	3367	2477369
3620	15.9	5.8	3.6	chr22	42071396	42071608	(8746860)	C	MER39	LTR/ERV1	(0)	707	499	2477370
2083	13.7	0.0	0.0	chr22	42219574	42219872	(8598596)	+	AluSz	SINE/Alu	1	299	(13)	2477593
2338	11.3	0.0	0.0	chr22	42313591	42313899	(8504569)	C	AluSz	SINE/Alu	(3)	309	1	2477779
337	20.8	0.0	4.3	chr22	42313910	42314016	(8504452)	+	L2a	LINE/L2	3025	3126	(249)	2477780
203	30.7	1.1	6.4	chr22	42314007	42314100	(8504368)	+	L2a	LINE/L2	3265	3353	(22)	2477780
1587	23.7	9.5	3.0	chr22	43587333	43587801	(7230667)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2480473
1287	29.9	10.2	3.6	chr22	43587802	43587880	(7230588)	+	HAL1	LINE/L1	567	664	(1843)	2480471
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
1790	16.9	3.6	0.7	chr22	44533630	44533924	(6284544)	+	AluJb	SINE/Alu	1	304	(8)	2482142
189	25.0	0.0	2.2	chr22	44533975	44534019	(6284449)	C	MIR	SINE/MIR	(2)	260	217	2482143
326	33.4	10.2	4.3	chr22	44533982	44534406	(6284062)	C	L2a	LINE/L2	(14)	3412	2936	2482144
955	21.0	0.0	0.0	chr22	44931054	44931215	(5887253)	C	AluJr	SINE/Alu	(11)	301	140	2482911
283	23.7	2.1	7.0	chr22	45239602	45239701	(5578767)	+	MIRb	SINE/MIR	63	157	(111)	2483502
2329	10.3	0.3	0.0	chr22	45500975	45501276	(5317192)	+	AluSp	SINE/Alu	1	303	(10)	2484073
1094	27.4	10.5	1.3	chr22	45501277	45501453	(5317015)	C	L1ME3A	LINE/L1	(35)	6207	5941	2484072
2175	8.6	0.0	2.8	chr22	45501454	45501768	(5316700)	C	AluSx	SINE/Alu	(0)	312	1	2484074
12	20.4	0.0	9.3	chr22	46297002	46297055	(4521413)	+	G-rich	Low_complexity	1	54	(0)	2485327
1786	21.0	10.5	1.1	chr22	46652059	46652515	(4165953)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2485850
301	35.5	8.3	0.9	chr22	46746159	46746371	(4072097)	C	L2	LINE/L2	(704)	2715	2486	2485993
1493	22.6	9.0	0.3	chr22	48668928	48669260	(2149208)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2488481
196	32.2	4.0	6.4	chr22	48669261	48669336	(2149132)	+	X6B_LINE	LINE/CR1	976	1052	(20)	2488480
431	29.4	4.8	7.8	chr22	49852801	49852929	(965539)	C	MER58B	DNA/hAT-Charlie	(177)	164	29	2489840
12	13.6	2.8	5.4	chr22	49853226	49853261	(965207)	+	(CGCCC)n	Simple_repeat	1	37	(0)	2489842
2981	14.6	4.5	0.0	chr22	50118435	50118949	(699519)	C	LTR45C	LTR/ERV1	(0)	539	1	2490219
236	30.9	12.3	2.9	chr22	50119063	50119202	(699266)	+	MamRep605	LTR?	443	597	(252)	2490220
19	4.5	0.0	0.0	chr22	50185744	50185766	(632702)	+	(G)n	Simple_repeat	1	23	(0)	2490310
23	19.0	3.9	3.8	chr22	50185845	50185921	(632547)	+	(CCCGC)n	Simple_repeat	1	80	(0)	2490311
19	31.1	2.1	2.1	chr22	50186029	50186122	(632346)	+	G-rich	Low_complexity	1	96	(0)	2490312
13	20.4	3.6	5.2	chr22	50271781	50271836	(546632)	+	(CCGCGG)n	Simple_repeat	1	58	(0)	2490390
29	22.8	4.4	5.0	chr22	50481615	50481749	(336719)	+	(CGCCCG)n	Simple_repeat	1	141	(0)	2490731
13	13.3	2.7	5.3	chr22	50530015	50530051	(288417)	+	(CGG)n	Simple_repeat	1	38	(0)	2490813
18	15.8	4.8	0.0	chr22	50583193	50583234	(235234)	+	(CGG)n	Simple_repeat	1	44	(0)	2490907
704	5.2	1.1	2.0	chr3	10001	10916	(198284643)	+	(CTAACC)n	Simple_repeat	1	926	(0)	2492347
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
273	20.2	4.1	0.0	chr3	4492255	4492323	(193803236)	+	L2c	LINE/L2	3290	3383	(4)	2499108
2359	10.9	0.3	0.0	chr3	4962422	4962732	(193332827)	+	AluSp	SINE/Alu	2	313	(0)	2499875
1568	27.2	4.5	7.4	chr3	4962733	4962779	(193332780)	+	L1ME2	LINE/L1	3265	3300	(3641)	2499867
1725	18.8	0.3	4.6	chr3	4962780	4963104	(193332455)	+	AluJr	SINE/Alu	1	311	(1)	2499876
356	24.8	13.1	0.0	chr3	5066813	5066945	(193228614)	+	L3	LINE/CR1	3794	3946	(153)	2500121
180	13.5	1.9	13.3	chr3	5066944	5067003	(193228556)	+	MIRc	SINE/MIR	83	135	(133)	2500122
11	30.1	0.0	3.6	chr3	5187465	5187520	(193108039)	+	G-rich	Low_complexity	1	56	(0)	2500375
14	23.7	4.9	4.7	chr3	5187564	5187644	(193107915)	+	G-rich	Low_complexity	1	85	(0)	2500375
28	0.0	5.9	0.0	chr3	5196914	5196947	(193098612)	+	(TCTTT)n	Simple_repeat	1	36	(0)	2500388
826	10.3	2.5	0.0	chr3	5196948	5197063	(193098496)	C	AluSx3	SINE/Alu	(28)	283	165	2500389
18	19.9	0.0	0.0	chr3	5197065	5197099	(193098460)	+	(T)n	Simple_repeat	1	35	(0)	2500390
241	23.8	10.1	2.4	chr3	5197122	5197203	(193098356)	+	L2b	LINE/L2	3287	3375	(0)	2500391
550	29.4	0.0	5.3	chr3	5197247	5197436	(193098123)	C	MER103C	DNA/hAT-Charlie	(45)	252	73	2500392
2010	19.7	7.1	0.5	chr3	7626406	7626839	(190668720)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	2504077
190	32.1	10.0	1.2	chr3	7627064	7627145	(190668414)	+	MIRc	SINE/MIR	115	204	(64)	2504078
2191	11.2	0.3	0.0	chr3	9648896	9649190	(188646369)	C	AluSz	SINE/Alu	(15)	297	2	2507671
16	27.6	3.0	1.4	chr3	9649441	9649507	(188646052)	+	(GGCGGA)n	Simple_repeat	1	69	(0)	2507672
12	11.5	3.3	3.2	chr3	9649587	9649636	(188645923)	+	(GCC)n	Simple_repeat	1	50	(0)	2507673
1702	14.9	0.7	7.8	chr3	9978029	9978350	(188317209)	+	AluJo	SINE/Alu	1	299	(13)	2508392
311	32.1	4.3	0.0	chr3	13479195	13479306	(184816253)	C	MIR3	SINE/MIR	(62)	146	30	2515336
246	24.4	3.5	5.8	chr3	13479293	13479379	(184816180)	+	MIRb	SINE/MIR	120	204	(64)	2515337
20	26.8	1.4	1.4	chr3	13880100	13880168	(184415391)	+	(CTCC)n	Simple_repeat	1	70	(0)	2516081
365	22.8	2.5	0.0	chr3	13891826	13891904	(184403655)	+	MLT1J	LTR/ERVL-MaLR	99	179	(333)	2516108
2128	20.2	3.6	1.1	chr3	14646624	14647078	(183648481)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2517392
23	29.8	2.1	2.0	chr3	15859410	15859506	(182436053)	+	(CGC)n	Simple_repeat	1	99	(0)	2519512
34	2.3	2.1	4.1	chr3	15859563	15859610	(182435949)	+	(CGC)n	Simple_repeat	1	49	(0)	2519512
289	14.5	1.4	8.0	chr3	18119284	18119358	(180176201)	+	MER5A	DNA/hAT-Charlie	3	72	(117)	2522904
12	25.6	0.0	6.9	chr3	19146921	19146978	(179148581)	+	(CCGCC)n	Simple_repeat	1	58	(0)	2524271
8028	12.8	12.6	1.5	chr3	23271161	23272559	(175023000)	C	LTR12C	LTR/ERV1	(0)	1579	3	2529929
19	0.0	0.0	0.0	chr3	23775151	23775171	(174520388)	+	(TA)n	Simple_repeat	1	21	(0)	2530744
1395	24.1	10.7	0.5	chr3	23775239	23775651	(174519908)	+	LTR16C	LTR/ERVL	1	460	(29)	2530745
18	6.0	8.6	0.0	chr3	23945493	23945527	(174350032)	+	(CGG)n	Simple_repeat	1	38	(0)	2531074
299	20.0	8.0	9.4	chr3	24059406	24059532	(174236027)	+	LTR105_Mam	LTR/ERVL	136	260	(340)	2531292
12	16.9	0.0	0.0	chr3	24494523	24494549	(173801010)	+	(CGCC)n	Simple_repeat	1	27	(0)	2531964
13	23.8	2.2	2.1	chr3	24495068	24495113	(173800446)	+	(CCCCG)n	Simple_repeat	1	47	(0)	2531965
13	5.3	0.0	0.0	chr3	24495218	24495237	(173800322)	+	(GCG)n	Simple_repeat	1	20	(0)	2531966
16	15.2	6.5	2.0	chr3	24495301	24495346	(173800213)	+	(CCG)n	Simple_repeat	1	49	(0)	2531967
12	8.1	3.6	3.5	chr3	24495702	24495729	(173799830)	+	(GCCCG)n	Simple_repeat	1	29	(0)	2531968
14	0.0	0.0	0.0	chr3	25664850	25664867	(172630692)	+	(GCC)n	Simple_repeat	1	18	(0)	2533626
325	29.6	5.4	4.5	chr3	31235634	31235832	(167059727)	C	MIRb	SINE/MIR	(53)	215	14	2541759
1158	25.5	6.0	8.4	chr3	32391104	32391544	(165904015)	+	L1ME2	LINE/L1	5732	6161	(3)	2543799
23	6.9	8.7	0.0	chr3	32391800	32391845	(165903714)	+	(GCGCCC)n	Simple_repeat	1	50	(0)	2543801
12	18.6	0.0	7.1	chr3	32391957	32391998	(165903561)	+	(GCCCG)n	Simple_repeat	1	42	(0)	2543802
29	25.1	5.2	1.6	chr3	33440050	33440165	(164855394)	+	(GCC)n	Simple_repeat	1	122	(0)	2545866
26	24.9	1.2	2.4	chr3	33440394	33440477	(164855082)	+	(CGCCC)n	Simple_repeat	1	85	(0)	2545867
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
405	27.2	6.9	9.9	chr3	34010327	34010391	(164285168)	+	MLT1H1	LTR/ERVL-MaLR	1	52	(497)	2546813
2712	5.4	0.7	0.0	chr3	34010392	34010686	(164284873)	C	AluY	SINE/Alu	(14)	297	1	2546814
1595	26.9	8.7	3.5	chr3	36805304	36805959	(161489600)	+	L1MEg	LINE/L1	92	784	(5300)	2550434
443	28.3	12.3	0.9	chr3	38496656	38496949	(159798610)	+	L2a	LINE/L2	3035	3426	(0)	2553123
3582	11.2	0.7	3.2	chr3	40138669	40139224	(158156335)	C	L1MA5A	LINE/L1	(5)	6292	5751	2555470
1842	24.2	2.9	2.5	chr3	40139247	40139583	(158155976)	C	L1ME1	LINE/L1	(12)	6167	5823	2555471
2187	15.5	0.0	0.0	chr3	40139584	40139879	(158155680)	C	AluJo	SINE/Alu	(16)	296	1	2555472
781	31.2	14.8	3.6	chr3	41710810	41711319	(156584240)	C	L2	LINE/L2	(2234)	1185	606	2557839
214	30.7	10.6	1.6	chr3	42443836	42443964	(155851595)	C	MIR	SINE/MIR	(124)	144	3	2559119
2023	13.8	6.8	1.1	chr3	42444300	42444658	(155850901)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2559120
7693	21.1	7.5	5.2	chr3	42572051	42572898	(155722661)	+	L1MD2	LINE/L1	123	1228	(5405)	2559323
333	16.1	1.6	0.0	chr3	42971942	42972003	(155323556)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	328	2559953
2049	12.5	12.7	0.6	chr3	42972008	42972360	(155323199)	+	MER83	LTR/ERV1	47	448	(0)	2559954
527	16.2	0.4	1.2	chr3	42972361	42972458	(155323101)	C	MLT1B	LTR/ERVL-MaLR	(55)	335	220	2559953
1146	26.9	15.6	1.1	chr3	46110552	46111017	(152184542)	+	MLT1H	LTR/ERVL-MaLR	3	548	(1)	2564933
30	2.9	0.0	2.7	chr3	46883316	46883352	(151412207)	+	(CTCC)n	Simple_repeat	1	37	(0)	2566063
28	0.0	3.3	0.0	chr3	46883357	46883386	(151412173)	+	(CGCT)n	Simple_repeat	1	31	(0)	2566064
2170	11.8	0.3	0.0	chr3	47791177	47791473	(150504086)	+	AluSx1	SINE/Alu	1	298	(14)	2567991
2360	7.0	2.0	1.0	chr3	47801947	47802245	(150493314)	C	AluSq2	SINE/Alu	(11)	302	1	2568027
1432	15.4	10.4	3.1	chr3	48673288	48673573	(149621986)	+	AluJb	SINE/Alu	1	309	(3)	2569681
17	8.3	7.9	0.0	chr3	49120805	49120842	(149174717)	+	(TCCGGT)n	Simple_repeat	1	41	(0)	2570688
11	28.5	4.9	3.5	chr3	49340061	49340142	(148955417)	+	(CGCGCCG)n	Simple_repeat	1	86	(0)	2571124
16	7.5	0.0	3.3	chr3	49357993	49358022	(148937537)	+	(CCGCC)n	Simple_repeat	1	30	(0)	2571163
16	0.0	0.0	0.0	chr3	49358241	49358260	(148937299)	+	(GCC)n	Simple_repeat	1	20	(0)	2571164
1556	14.6	0.3	6.7	chr3	49468837	49468986	(148826573)	C	AluJb	SINE/Alu	(179)	133	1	2571450
277	20.7	0.0	2.4	chr3	49834836	49834919	(148460640)	+	HAL1ME	LINE/L1	1062	1143	(1322)	2572069
2049	11.7	0.7	0.3	chr3	49936703	49936984	(148358575)	C	AluSg	SINE/Alu	(27)	283	1	2572253
267	30.9	4.3	1.8	chr3	49936989	49937100	(148358459)	C	Tigger19a	DNA/TcMar-Tigger	(82)	241	127	2572254
2265	9.8	0.0	0.3	chr3	49937391	49937686	(148357873)	C	AluSx1	SINE/Alu	(4)	308	14	2572255
15	14.7	0.0	0.0	chr3	50260317	50260346	(148035213)	+	(GGAG)n	Simple_repeat	1	30	(0)	2572837
1423	17.0	1.8	0.0	chr3	50463300	50463517	(147832042)	C	AluJb	SINE/Alu	(10)	302	81	2573073
8761	13.1	2.7	1.6	chr3	50847904	50849035	(147446524)	C	L1PA15-16	LINE/L1	(3613)	3236	2103	2573658
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
13	18.4	7.0	0.0	chr3	52897677	52897719	(145397840)	+	G-rich	Low_complexity	1	46	(0)	2576620
26	21.9	4.7	1.1	chr3	53256022	53256107	(145039452)	+	G-rich	Low_complexity	1	90	(0)	2577297
289	27.9	3.5	3.5	chr3	53375209	53375323	(144920236)	+	MIR3	SINE/MIR	32	146	(62)	2577532
180	33.0	13.9	2.2	chr3	53846820	53847002	(144448557)	+	MIRb	SINE/MIR	31	238	(30)	2578144
237	33.7	0.0	0.0	chr3	56086548	56086636	(142208923)	C	X9_LINE	LINE/L1	(726)	210	122	2581479
15	16.5	8.9	1.6	chr3	58332712	58332767	(139962792)	+	(GCGCAG)n	Simple_repeat	1	61	(0)	2585826
16	26.4	1.4	4.2	chr3	58333103	58333172	(139962387)	+	G-rich	Low_complexity	1	71	(0)	2585827
2147	25.6	12.2	3.0	chr3	58377661	58378426	(139917133)	+	HAL1	LINE/L1	12	857	(1650)	2585915
2451	8.7	0.6	0.3	chr3	58378484	58378512	(139917047)	C	AluSp	SINE/Alu	(1)	312	284	2585916
49	0.0	0.0	0.0	chr3	58378513	58378554	(139917005)	+	(TG)n	Simple_repeat	1	42	(0)	2585917
304	31.0	11.7	0.0	chr3	59368879	59369007	(138926552)	+	MIRb	SINE/MIR	111	256	(6)	2587413
12	20.9	0.0	2.8	chr3	59369084	59369119	(138926440)	+	(TCCTCT)n	Simple_repeat	1	36	(0)	2587414
275	35.5	10.3	6.0	chr3	59369537	59369914	(138925645)	+	L2c	LINE/L2	2821	3210	(177)	2587415
14	29.8	2.4	4.6	chr3	61561456	61561540	(136734019)	+	(CGCC)n	Simple_repeat	1	87	(0)	2590827
15	6.9	0.0	8.3	chr3	61561751	61561786	(136733773)	+	(CTCCC)n	Simple_repeat	1	36	(0)	2590828
15	22.1	1.7	5.1	chr3	61561850	61561907	(136733652)	+	(CGCCG)n	Simple_repeat	1	59	(0)	2590829
232	34.8	4.5	3.6	chr3	61686132	61686253	(136609306)	C	MIRc	SINE/MIR	(114)	154	32	2591059
14	25.6	0.0	3.9	chr3	66407595	66407623	(131887936)	+	(ACGCAC)n	Simple_repeat	1	51	(0)	2599176
15	9.8	0.0	0.0	chr3	66407624	66407645	(131887914)	+	(CA)n	Simple_repeat	1	22	(0)	2599177
16	21.6	1.7	5.0	chr3	69013317	69013375	(129282184)	+	G-rich	Low_complexity	1	60	(0)	2603323
19	12.1	0.0	4.9	chr3	69542707	69542747	(128752812)	+	G-rich	Low_complexity	1	41	(0)	2604353
290	34.6	2.4	4.8	chr3	70069308	70069442	(128226117)	C	L2c	LINE/L2	(8)	3379	3219	2605272
221	26.6	16.0	2.5	chr3	70069511	70069591	(128225968)	C	MIRb	SINE/MIR	(111)	157	64	2605273
314	25.1	10.8	2.6	chr3	72447870	72448012	(125847547)	+	MIRb	SINE/MIR	106	260	(2)	2609149
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
9930	12.8	2.8	2.7	chr3	80704591	80706168	(117589391)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2621104
1344	32.0	9.3	3.0	chr3	82128243	82128447	(116167112)	+	ERV3-16A3_I-int	LTR/ERVL	4994	5225	(1)	2622987
773	29.3	15.7	1.9	chr3	82128449	82128820	(116166739)	+	LTR16	LTR/ERVL	2	434	(4)	2622987
19	26.4	4.1	4.5	chr3	87792497	87792618	(110502941)	+	GA-rich	Low_complexity	1	121	(0)	2629960
1880	13.8	5.1	0.0	chr3	93981600	93981895	(104313664)	+	AluJb	SINE/Alu	1	312	(0)	2633636
40	2.5	0.0	0.0	chr3	101849216	101849256	(96446303)	+	(GGAGGCG)n	Simple_repeat	1	41	(0)	2643700
20	9.8	6.8	0.0	chr3	101849316	101849359	(96446200)	+	G-rich	Low_complexity	1	47	(0)	2643701
13	22.6	0.0	2.6	chr3	101849741	101849778	(96445781)	+	(CGC)n	Simple_repeat	1	38	(0)	2643702
210	33.0	13.6	0.5	chr3	102593071	102593256	(95702303)	+	L2a	LINE/L2	2913	3126	(261)	2644735
2489	7.9	1.0	0.0	chr3	102593284	102593586	(95701973)	C	AluY	SINE/Alu	(5)	306	1	2644736
1954	27.7	5.2	7.4	chr3	104192813	104193727	(94101832)	+	MER21C	LTR/ERVL	93	913	(25)	2646755
426	27.8	4.1	0.0	chr3	104193738	104193899	(94101660)	+	L1MEf	LINE/L1	5101	5269	(1050)	2646754
14420	13.5	2.5	2.7	chr3	107213567	107213863	(91081696)	+	Tigger1	DNA/TcMar-Tigger	1	281	(2137)	2650499
2326	11.2	0.3	0.0	chr3	107213864	107214168	(91081391)	C	AluSx1	SINE/Alu	(6)	306	1	2650500
18	23.9	0.0	2.2	chr3	107522822	107522867	(90772692)	+	(TG)n	Simple_repeat	1	46	(0)	2651000
31	0.0	0.0	0.0	chr3	107523219	107523247	(90772312)	+	(GCG)n	Simple_repeat	1	29	(0)	2651001
603	10.1	17.5	0.0	chr3	112988846	112988944	(85306615)	C	FLAM_C	SINE/Alu	(10)	133	14	2658549
461	26.2	6.8	2.5	chr3	113184843	113185038	(85110521)	C	HAL1	LINE/L1	(8)	2499	2295	2658870
1517	20.1	14.7	2.5	chr3	113185093	113185496	(85110063)	+	LTR16B2	LTR/ERVL	1	462	(0)	2658871
3227	25.5	7.6	2.8	chr3	113185498	113186624	(85108935)	+	ERV3-16A3_I-int	LTR/ERVL	7	1192	(4034)	2658871
36	25.1	2.9	0.9	chr3	113211709	113211813	(85083746)	+	(CA)n	Simple_repeat	1	108	(0)	2658908
20	25.1	3.1	5.0	chr3	113212133	113212230	(85083329)	+	G-rich	Low_complexity	1	101	(0)	2658909
190	26.9	2.9	1.5	chr3	113745275	113745342	(84550217)	C	AmnSINE1	SINE/5S-Deu-L2	(417)	158	90	2659670
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
202	34.2	0.0	11.2	chr3	119241221	119241345	(79054214)	+	MIR	SINE/MIR	84	194	(68)	2667270
432	26.5	10.5	7.7	chr3	119639318	119639538	(78656021)	+	Charlie23a	DNA/hAT-Charlie	112	339	(0)	2667926
371	8.0	0.0	0.0	chr3	119639648	119639697	(78655862)	C	Alu	SINE/Alu	(7)	294	245	2667927
373	29.9	16.6	4.7	chr3	121998851	121999082	(76296477)	+	MIRb	SINE/MIR	1	265	(3)	2671317
291	30.7	4.5	5.2	chr3	123941117	123941250	(74354309)	+	MER20B	DNA/hAT-Charlie	1	133	(650)	2674536
19	18.8	4.0	5.2	chr3	126357512	126357585	(71937974)	+	(GGCCC)n	Simple_repeat	1	77	(0)	2678458
557	28.9	14.6	2.6	chr3	126704976	126705366	(71590193)	+	L2a	LINE/L2	2933	3378	(48)	2678969
89	19.5	2.2	2.6	chr3	127547665	127547888	(70747671)	+	(CCCCT)n	Simple_repeat	1	229	(0)	2680227
267	16.8	0.5	0.0	chr3	127548260	127548315	(70747244)	+	MIRb	SINE/MIR	113	170	(98)	2680228
269	30.4	8.2	6.9	chr3	127637284	127637428	(70658131)	C	L3	LINE/CR1	(264)	3835	3689	2680414
319	26.8	8.7	13.7	chr3	127637424	127637605	(70657954)	C	MIRc	SINE/MIR	(4)	264	93	2680415
432	19.9	19.9	0.0	chr3	128011154	128011334	(70284225)	C	LTR8B	LTR/ERV1	(64)	756	531	2681055
845	20.0	0.0	0.0	chr3	129387965	129388099	(68907460)	C	FLAM_C	SINE/Alu	(8)	135	1	2683646
7065	4.8	1.0	0.1	chr3	130348106	130348995	(67946564)	C	L1PA8	LINE/L1	(0)	6172	5275	2685358
21	10.5	0.0	0.0	chr3	132332613	132332643	(65962916)	+	(AG)n	Simple_repeat	1	31	(0)	2688311
41	13.0	0.0	0.0	chr3	134029474	134029549	(64266010)	+	(AC)n	Simple_repeat	1	76	(0)	2690821
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
13	18.9	0.0	0.0	chr3	134651262	134651291	(63644268)	+	(CCTC)n	Simple_repeat	1	30	(0)	2691733
283	31.4	9.2	8.5	chr3	138594821	138595293	(59700266)	C	MamGypLTR3	LTR/Gypsy	(236)	658	182	2697757
18	17.6	6.7	0.0	chr3	138834892	138834936	(59460623)	+	(GC)n	Simple_repeat	1	48	(0)	2698265
19	4.0	0.0	0.0	chr3	138835008	138835033	(59460526)	+	(GCG)n	Simple_repeat	1	26	(0)	2698266
239	30.3	2.0	2.9	chr3	140205730	140205831	(58089728)	C	L2c	LINE/L2	(23)	3364	3264	2700474
297	24.6	3.3	0.0	chr3	140205994	140206111	(58089448)	C	Chap1_Mam	DNA/hAT-Charlie	(154)	188	67	2700475
14	15.3	2.6	2.6	chr3	141402302	141402339	(56893220)	+	G-rich	Low_complexity	1	39	(0)	2702239
21	18.3	6.5	0.0	chr3	141402473	141402534	(56893025)	+	(CGCGG)n	Simple_repeat	1	66	(0)	2702240
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
27	0.0	0.0	0.0	chr3	142829228	142829253	(55466306)	+	(AAAT)n	Simple_repeat	1	26	(0)	2704763
200	34.4	0.0	5.1	chr3	145009139	145009236	(53286323)	+	L3	LINE/CR1	1535	1627	(2472)	2707788
23	17.9	0.0	2.2	chr3	145009332	145009377	(53286182)	+	(TG)n	Simple_repeat	1	46	(0)	2707789
1004	19.8	0.0	0.0	chr3	150704641	150704807	(47590752)	C	AluJr	SINE/Alu	(16)	296	130	2715699
63	0.0	1.7	0.0	chr3	150704809	150704868	(47590691)	+	(TATAT)n	Simple_repeat	1	61	(0)	2715700
2438	6.7	0.0	0.0	chr3	150704869	150705151	(47590408)	C	AluSc8	SINE/Alu	(28)	283	1	2715701
15	15.9	2.9	0.0	chr3	154121389	154121423	(44174136)	+	(CGGCGC)n	Simple_repeat	1	36	(0)	2720752
902	31.3	6.9	6.5	chr3	155456998	155457517	(42838042)	C	MER45C	DNA/hAT-Tip100	(431)	522	1	2722528
1400	15.5	3.3	5.4	chr3	155805476	155805753	(42489806)	+	AluJr	SINE/Alu	38	309	(3)	2723033
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
1324	31.2	7.3	3.8	chr3	157475517	157477024	(40818535)	+	ERV3-16A3_I-int	LTR/ERVL	3458	5048	(178)	2725560
2050	20.5	5.2	2.2	chr3	157477025	157477514	(40818045)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2725561
845	27.0	0.8	3.2	chr3	157477515	157477561	(40817998)	+	ERV3-16A3_I-int	LTR/ERVL	5049	5092	(134)	2725560
852	22.3	5.0	0.5	chr3	157477555	157477766	(40817793)	+	ERV3-16A3_I-int	LTR/ERVL	3734	3955	(1271)	2725562
250	33.3	0.0	0.0	chr3	157477790	157477861	(40817698)	+	ERV3-16A3_I-int	LTR/ERVL	4154	4225	(1442)	2725562
33	0.0	0.0	0.0	chr3	158117882	158117912	(40177647)	+	(TTTC)n	Simple_repeat	1	31	(0)	2726373
1988	16.9	0.0	0.0	chr3	158117948	158118249	(40177310)	C	AluJb	SINE/Alu	(10)	302	1	2726374
704	15.9	10.4	4.8	chr3	165256372	165256516	(33039043)	+	AluJr	SINE/Alu	137	290	(22)	2735967
765	30.8	7.7	5.5	chr3	168217759	168218140	(30077419)	C	MER115	DNA/hAT-Tip100	(0)	693	303	2739756
367	21.9	4.7	0.0	chr3	168218279	168218360	(30077199)	C	MER115	DNA/hAT-Tip100	(602)	91	6	2739756
15	5.6	0.0	0.0	chr3	169242856	169242874	(29052685)	+	(T)n	Simple_repeat	1	19	(0)	2741108
201	30.5	9.4	8.1	chr3	169812781	169813001	(28482558)	C	L2b	LINE/L2	(45)	3330	3107	2741848
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
13	14.4	3.2	0.0	chr3	170357188	170357218	(27938341)	+	G-rich	Low_complexity	1	32	(0)	2742885
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
186	39.0	1.7	0.8	chr3	171797283	171797372	(26498187)	+	L2c	LINE/L2	3187	3277	(110)	2745099
1067	15.1	2.1	0.0	chr3	171797373	171797557	(26498002)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2745100
1568	18.4	5.3	0.3	chr3	174498882	174499203	(23796356)	+	MER44A	DNA/TcMar-Tigger	1	339	(0)	2749073
2317	24.8	3.4	4.9	chr3	174499204	174500000	(23795559)	C	L1ME1	LINE/L1	(785)	5361	4576	2749072
2010	13.8	0.0	1.0	chr3	177190314	177190617	(21104942)	C	AluSq	SINE/Alu	(12)	301	1	2752757
816	28.9	5.5	4.3	chr3	179308819	179309144	(18986415)	+	MER90a	LTR/ERV1	285	614	(0)	2755956
23	16.7	7.3	4.8	chr3	179653052	179653169	(18642390)	+	(GCCCGCT)n	Simple_repeat	1	120	(0)	2756626
189	34.1	10.6	4.0	chr3	179662818	179662962	(18632597)	+	L2c	LINE/L2	2449	2589	(830)	2756648
2929	13.3	2.0	0.6	chr3	179662963	179663445	(18632114)	C	L1MB3	LINE/L1	(1)	6182	5693	2756649
2160	13.9	0.0	0.0	chr3	181889179	181889458	(16406101)	C	AluSq2	SINE/Alu	(32)	281	2	2760162
544	21.8	9.5	0.0	chr3	181889500	181889632	(16405927)	C	Arthur1B	DNA/hAT-Tip100	(1078)	147	1	2760163
194	25.5	0.0	1.8	chr3	181889898	181889953	(16405606)	+	MIR3	SINE/MIR	10	64	(144)	2760164
222	26.9	15.6	4.4	chr3	181890015	181890127	(16405432)	C	MIR3	SINE/MIR	(78)	130	3	2760165
18	12.6	0.0	0.0	chr3	185152313	185152339	(13143220)	+	(A)n	Simple_repeat	1	27	(0)	2765861
12	8.8	4.2	0.0	chr3	185152947	185152970	(13142589)	+	(GCG)n	Simple_repeat	1	25	(0)	2765862
22	22.5	6.0	0.0	chr3	185153040	185153106	(13142453)	+	(GC)n	Simple_repeat	1	71	(0)	2765863
2586	5.3	0.3	0.3	chr3	187535926	187536226	(10759333)	+	AluY	SINE/Alu	1	301	(10)	2770288
327	29.5	13.9	0.7	chr3	188520262	188520411	(9775148)	+	LTR16E2	LTR/ERVL	8	180	(388)	2772042
983	15.0	0.7	0.0	chr3	188520432	188520584	(9774975)	C	THE1C	LTR/ERVL-MaLR	(220)	155	2	2772043
1765	29.1	5.5	2.8	chr3	190971553	190972349	(7323210)	C	ERV3-16A3_I-int	LTR/ERVL	(900)	4814	3789	2775905
688	30.6	10.0	1.3	chr3	190972394	190972704	(7322855)	+	MLT1F1-int	LTR/ERVL-MaLR	1148	1488	(1)	2775906
2253	11.0	0.0	1.0	chr3	192880063	192880370	(5415189)	+	AluSx3	SINE/Alu	1	305	(6)	2778606
26	13.3	2.6	7.6	chr3	194141526	194141602	(4153957)	+	(GGC)n	Simple_repeat	1	79	(0)	2780609
645	24.5	1.3	0.0	chr3	194315941	194316095	(3979464)	+	MER5B	DNA/hAT-Charlie	16	172	(6)	2780925
751	20.1	5.3	0.6	chr3	194316111	194316290	(3979269)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2780926
353	23.0	0.0	0.0	chr3	194316335	194316408	(3979151)	+	MER5A1	DNA/hAT-Charlie	43	116	(50)	2780927
1414	18.4	10.1	0.3	chr3	194316412	194316743	(3978816)	C	L1MA6	LINE/L1	(0)	6300	5933	2780928
14	21.8	5.3	5.0	chr4	932006	932081	(189282474)	+	(CCGCAG)n	Simple_repeat	1	80	(0)	2789688
26	16.8	2.9	2.8	chr4	1767721	1767790	(188446765)	+	(CCGCGCC)n	Simple_repeat	1	72	(0)	2790582
14	20.8	4.5	0.0	chr4	1767912	1767955	(188446600)	+	(CCCCCA)n	Simple_repeat	1	46	(0)	2790583
13	18.7	5.8	3.6	chr4	1767956	1767963	(188446592)	+	(CCGCC)n	Simple_repeat	1	55	(0)	2790584
714	15.5	4.6	3.1	chr4	2009803	2009931	(188204624)	C	AluJo	SINE/Alu	(180)	132	2	2790937
989	23.8	5.2	4.2	chr4	2010076	2010382	(188204173)	+	MER63D	DNA/hAT-Blackjack	314	625	(436)	2790938
1572	16.7	4.8	1.3	chr4	2818921	2819220	(187395335)	C	AluJo	SINE/Alu	(0)	312	2	2792275
2347	16.2	6.0	0.7	chr4	2869149	2869588	(187344967)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	2792369
19	22.9	0.0	0.0	chr4	2963881	2963926	(187250629)	+	(GCG)n	Simple_repeat	1	46	(0)	2792483
254	21.8	3.9	7.2	chr4	3329655	3329809	(186884746)	+	MamGypLTR1d	LTR/Gypsy	718	879	(43)	2793071
3707	17.2	5.6	2.4	chr4	3346046	3347162	(186867393)	C	MER65-int	LTR/ERV1	(2091)	4548	3605	2793094
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
2487	8.7	0.0	0.0	chr4	8099564	8099874	(182114681)	+	AluY	SINE/Alu	1	311	(0)	2801238
314	37.6	5.2	5.8	chr4	12889110	12889383	(177325172)	C	L2c	LINE/L2	(71)	3316	3045	2808444
374	25.5	10.3	7.4	chr4	13483459	13483674	(176730881)	C	MIR	SINE/MIR	(20)	242	20	2809367
6340	20.0	0.8	1.6	chr4	15694467	15695719	(174518836)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	3860	2813073
1983	13.3	1.5	1.2	chr4	15695721	15696062	(174518493)	C	MER50B	LTR/ERV1	(354)	343	1	2813074
279	28.6	5.7	6.3	chr4	20247971	20248112	(169966443)	C	MIRb	SINE/MIR	(0)	268	128	2820688
783	26.7	0.0	0.0	chr4	20248430	20248616	(169965939)	C	MER5A	DNA/hAT-Charlie	(1)	188	2	2820689
1001	17.5	0.0	2.5	chr4	25196850	25197009	(165017546)	C	AluJb	SINE/Alu	(19)	293	138	2828472
269	35.1	4.6	1.8	chr4	25197219	25197386	(165017169)	+	MLT1L	LTR/ERVL-MaLR	344	516	(94)	2828473
229	24.3	2.8	4.1	chr4	25633472	25633544	(164581011)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	491	2829420
1608	18.2	12.4	0.3	chr4	25633815	25634133	(164580422)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	3	2829421
246	31.8	2.3	1.2	chr4	26342373	26342458	(163872097)	C	MIRc	SINE/MIR	(160)	108	22	2830895
271	24.0	3.9	6.5	chr4	39459232	39459338	(150755217)	C	MIR	SINE/MIR	(0)	262	159	2849675
2137	9.4	6.8	0.0	chr4	44493819	44494104	(145720451)	+	AluSz6	SINE/Alu	5	311	(1)	2858359
3593	23.1	7.1	6.9	chr4	44494105	44494853	(145719702)	+	L1M4	LINE/L1	354	1111	(6406)	2858358
20	10.0	0.0	0.0	chr4	46389097	46389129	(143825426)	+	(GAGGA)n	Simple_repeat	1	33	(0)	2860782
13	23.3	0.0	2.4	chr4	48269813	48269854	(141944701)	+	(GAGCCCA)n	Simple_repeat	1	42	(0)	2863589
22	31.4	3.0	2.9	chr4	48269850	48269981	(141944574)	+	(CGCCC)n	Simple_repeat	1	136	(0)	2863590
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
11	24.1	0.0	0.0	chr4	52658759	52658792	(137555763)	+	(CCCCCA)n	Simple_repeat	1	34	(0)	2866514
13	15.1	6.2	3.9	chr4	52659371	52659418	(137555137)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	2866515
20	20.6	2.0	0.0	chr4	56049161	56049210	(134165345)	+	(TGC)n	Simple_repeat	1	51	(0)	2871924
14	24.6	3.3	3.2	chr4	56049218	56049278	(134165277)	+	(GCCG)n	Simple_repeat	1	63	(0)	2871925
12	13.6	6.8	4.3	chr4	56049424	56049467	(134165088)	+	G-rich	Low_complexity	1	47	(0)	2871926
28	0.0	0.0	0.0	chr4	56728884	56728910	(133485645)	+	(T)n	Simple_repeat	1	27	(0)	2873137
2189	7.8	0.7	0.0	chr4	56728913	56729182	(133485373)	C	AluSg	SINE/Alu	(38)	272	1	2873138
484	20.8	20.1	2.4	chr4	56755859	56756070	(133458485)	+	LTR88b	LTR/Gypsy?	70	328	(509)	2873204
1747	9.0	0.0	0.0	chr4	56947188	56947410	(133267145)	+	AluSx4	SINE/Alu	83	305	(5)	2873689
3667	9.4	3.9	2.8	chr4	56947414	56947519	(133267036)	C	MER41A	LTR/ERV1	(14)	540	442	2873690
2340	6.5	3.0	0.3	chr4	56947520	56947810	(133266745)	+	AluY	SINE/Alu	1	299	(12)	2873691
534	29.8	11.1	6.7	chr4	61102374	61102700	(129111855)	+	LTR16E1	LTR/ERVL	164	506	(32)	2878961
19	23.0	2.0	0.0	chr4	61102703	61102753	(129111802)	+	(GTT)n	Simple_repeat	1	52	(0)	2878962
1728	15.9	0.3	5.9	chr4	61346482	61346802	(128867753)	+	AluJr	SINE/Alu	1	303	(9)	2879292
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
3901	18.6	2.1	5.6	chr4	72082545	72083479	(118131076)	C	L1MA8	LINE/L1	(25)	6266	5365	2893065
1499	31.7	9.1	2.2	chr4	72083480	72084207	(118130348)	+	L2	LINE/L2	2069	2851	(568)	2893064
1500	23.9	9.0	5.6	chr4	73165571	73166119	(117048436)	+	MLT1E3	LTR/ERVL-MaLR	27	627	(0)	2894512
379	26.7	1.0	1.0	chr4	73166148	73166249	(117048306)	+	HAL1	LINE/L1	782	883	(1624)	2894511
612	18.0	9.2	2.1	chr4	73166388	73166529	(117048026)	+	HAL1	LINE/L1	1549	1701	(806)	2894511
24	7.9	2.4	2.3	chr4	74933047	74933088	(115281467)	+	(GGC)n	Simple_repeat	1	43	(0)	2896885
4270	15.0	3.1	3.9	chr4	75464715	75465526	(114749029)	C	L1MB7	LINE/L1	(0)	6184	5380	2897484
651	23.6	9.1	2.9	chr4	75465785	75465989	(114748566)	+	L2a	LINE/L2	3207	3425	(1)	2897485
208	34.9	5.0	1.5	chr4	76238009	76238142	(113976413)	C	L2	LINE/L2	(428)	2991	2853	2898944
184	31.7	4.7	1.2	chr4	76238576	76238658	(113975897)	C	L2	LINE/L2	(927)	2492	2407	2898944
228	27.0	8.6	0.0	chr4	76377407	76377480	(113837075)	C	Tigger15a	DNA/TcMar-Tigger	(356)	359	279	2899154
22	22.1	1.7	0.0	chr4	80203221	80203278	(110011277)	+	(GCTGCG)n	Simple_repeat	1	59	(0)	2904529
16	37.5	1.2	0.0	chr4	80203279	80203303	(110011252)	+	(CCG)n	Simple_repeat	3	86	(0)	2904530
327	29.0	0.0	1.1	chr4	81724939	81725032	(108489523)	+	MIR3	SINE/MIR	21	113	(95)	2906574
250	32.6	14.2	2.2	chr4	82804573	82805074	(107409481)	C	L2	LINE/L2	(991)	2428	1857	2908263
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
16	24.6	2.3	0.0	chr4	84499094	84499146	(105715409)	+	(CT)n	Simple_repeat	1	54	(0)	2911182
13	15.0	8.7	2.0	chr4	84499210	84499255	(105715300)	+	(CCTCT)n	Simple_repeat	1	50	(0)	2911183
1283	21.3	1.7	0.0	chr4	84528712	84528946	(105685609)	C	MER8	DNA/TcMar-Tigger	(0)	239	1	2911217
1911	15.3	0.0	2.0	chr4	84652859	84653159	(105561396)	C	AluJb	SINE/Alu	(1)	311	17	2911420
1047	22.2	13.6	0.0	chr4	85743327	85743587	(104470968)	+	AluJb	SINE/Alu	1	302	(10)	2912935
66	0.0	0.0	0.0	chr4	85827462	85827517	(104387038)	+	(GT)n	Simple_repeat	1	56	(0)	2913040
2189	8.0	2.0	1.7	chr4	86893303	86893602	(103320953)	+	AluSg	SINE/Alu	1	301	(9)	2914542
2464	4.3	0.0	0.3	chr4	86893865	86894196	(103320359)	C	AluY	SINE/Alu	(0)	311	1	2914543
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
438	27.9	9.4	2.5	chr4	87025236	87025393	(103189162)	C	MIR	SINE/MIR	(0)	262	93	2914813
15	12.0	7.9	2.4	chr4	88007678	88007715	(102206840)	+	(GC)n	Simple_repeat	1	41	(0)	2916371
19	18.3	0.0	2.2	chr4	88008016	88008077	(102206478)	+	GA-rich	Low_complexity	1	60	(0)	2916372
15142	13.2	2.1	0.2	chr4	89365509	89367880	(100846675)	+	Tigger1	DNA/TcMar-Tigger	2	2418	(0)	2918551
4539	15.1	6.9	1.9	chr4	92060444	92061201	(98153354)	C	LTR1A1	LTR/ERV1	(0)	799	1	2921839
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
22	9.2	0.0	0.0	chr4	95549254	95549288	(94665267)	+	(GGGGGT)n	Simple_repeat	1	35	(0)	2926554
20	17.8	3.9	0.0	chr4	95549289	95549304	(94665251)	+	(GGAGGT)n	Simple_repeat	1	53	(0)	2926555
336	31.4	12.1	2.2	chr4	96318800	96318963	(93895592)	+	MIR	SINE/MIR	81	267	(1)	2927521
186	36.9	3.7	1.9	chr4	96319028	96319132	(93895423)	+	MIR	SINE/MIR	28	134	(128)	2927522
2101	10.1	2.0	2.0	chr4	96319187	96319483	(93895072)	+	AluSq2	SINE/Alu	1	297	(16)	2927523
10306	11.0	0.7	0.2	chr4	97037092	97038554	(93176001)	C	L1PA7	LINE/L1	(4990)	1471	2	2928427
12	25.6	0.0	0.0	chr4	98658520	98658556	(91555999)	+	(CGTC)n	Simple_repeat	1	37	(0)	2930459
26	22.0	4.8	5.4	chr4	98658600	98658723	(91555832)	+	(CGCT)n	Simple_repeat	1	130	(0)	2930460
18	0.0	0.0	0.0	chr4	98929300	98929319	(91285236)	+	(T)n	Simple_repeat	1	20	(0)	2930946
13	27.6	5.6	1.3	chr4	98995966	98996036	(91218519)	+	(CTC)n	Simple_repeat	1	75	(0)	2931109
10044	10.8	7.5	0.9	chr4	102993082	102994600	(87219955)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	2936454
13	14.7	0.0	3.1	chr4	103019725	103019756	(87194799)	+	G-rich	Low_complexity	1	32	(0)	2936488
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
51	13.2	2.1	1.0	chr4	107263710	107263804	(82950751)	+	GA-rich	Low_complexity	1	97	(0)	2941851
631	24.1	2.8	0.7	chr4	107263882	107264019	(82950536)	+	MLT2F	LTR/ERVL	1	141	(522)	2941852
1259	27.7	5.3	2.0	chr4	107264048	107264448	(82950107)	+	ERVL-E-int	LTR/ERVL	736	1150	(4517)	2941853
2333	23.5	3.4	9.8	chr4	108737894	108738634	(81475921)	+	ERV3-16A3_I-int	LTR/ERVL	1991	2689	(2537)	2943978
2842	23.0	13.2	1.3	chr4	108738630	108739396	(81475159)	+	ERV3-16A3_I-int	LTR/ERVL	3479	4337	(889)	2943978
430	29.1	4.6	0.4	chr4	110412311	110412541	(79802014)	C	L1MEh	LINE/L1	(1235)	1000	760	2946569
15	0.0	0.0	0.0	chr4	112516023	112516041	(77698514)	+	(CGG)n	Simple_repeat	1	19	(0)	2949285
19	0.0	0.0	0.0	chr4	112705455	112705478	(77509077)	+	(GGTG)n	Simple_repeat	1	24	(0)	2949674
11742	10.3	0.5	0.5	chr4	112836396	112838026	(77376529)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	2949976
16	26.4	3.2	3.1	chr4	113352733	113352794	(76861761)	+	(TG)n	Simple_repeat	1	64	(0)	2950703
515	22.7	1.7	0.8	chr4	119041837	119041956	(71172599)	C	MER5A	DNA/hAT-Charlie	(67)	122	2	2957894
28	0.0	0.0	0.0	chr4	119626920	119626946	(70587609)	+	(AAAAC)n	Simple_repeat	1	27	(0)	2958739
21	23.0	2.4	4.7	chr4	119627302	119627391	(70587164)	+	(CCGCG)n	Simple_repeat	1	87	(0)	2958740
18185	14.7	3.8	1.6	chr4	119715428	119721778	(70492777)	+	L1PB1	LINE/L1	357	6866	(1)	2958881
75	8.5	1.7	1.7	chr4	121380133	121380248	(68834307)	+	(GA)n	Simple_repeat	1	118	(0)	2961003
1679	27.0	7.5	10.1	chr4	121714623	121715479	(68499076)	C	HAL1	LINE/L1	(624)	1883	1091	2961444
412	21.4	1.1	0.0	chr4	121715552	121715640	(68498915)	C	HAL1	LINE/L1	(1622)	885	796	2961444
20	17.5	2.2	0.0	chr4	121715679	121715723	(68498832)	+	(TTGT)n	Simple_repeat	1	46	(0)	2961446
15092	15.8	4.8	2.3	chr4	123047999	123050739	(67163816)	C	L1MA4	LINE/L1	(1131)	6431	3635	2963398
1948	10.4	2.9	2.9	chr4	123050740	123051019	(67163536)	C	AluSg	SINE/Alu	(15)	295	16	2963400
16	0.0	4.3	0.0	chr4	123505553	123505575	(66708980)	+	(TGA)n	Simple_repeat	1	24	(0)	2964102
20	0.0	0.0	0.0	chr4	123505599	123505620	(66708935)	+	(A)n	Simple_repeat	1	22	(0)	2964103
17	25.9	0.0	1.9	chr4	123505639	123505690	(66708865)	+	(CGC)n	Simple_repeat	1	52	(0)	2964104
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
24	26.3	0.0	1.4	chr4	128062002	128062071	(62152484)	+	(GCC)n	Simple_repeat	1	70	(0)	2970078
258	32.1	6.8	8.5	chr4	138308609	138308819	(51905736)	+	L2c	LINE/L2	2920	3126	(261)	2982742
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
2456	7.4	0.0	0.3	chr4	139831797	139832092	(50382463)	C	AluSc8	SINE/Alu	(16)	295	1	2985314
14	23.8	1.9	3.7	chr4	140755916	140755968	(49458587)	+	(CCG)n	Simple_repeat	1	54	(0)	2986711
13	9.3	0.0	0.0	chr4	140756134	140756156	(49458399)	+	(CGCC)n	Simple_repeat	1	23	(0)	2986712
15	17.0	0.0	6.7	chr4	140756162	140756206	(49458349)	+	(GCG)n	Simple_repeat	1	45	(0)	2986713
13	25.7	3.5	1.7	chr4	140756306	140756362	(49458193)	+	(GCCCCCG)n	Simple_repeat	1	59	(0)	2986714
30	12.4	1.9	0.0	chr4	140756367	140756419	(49458136)	+	(GGA)n	Simple_repeat	1	54	(0)	2986715
18	24.4	4.3	1.4	chr4	141132825	141132893	(49081662)	+	(CCCCG)n	Simple_repeat	1	72	(0)	2987300
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
12	21.0	2.5	2.4	chr4	145481658	145481697	(44732858)	+	G-rich	Low_complexity	1	41	(0)	2992972
13	5.0	0.0	4.3	chr4	145481722	145481744	(44732811)	+	(GCG)n	Simple_repeat	1	23	(0)	2992973
4182	13.1	4.4	1.0	chr4	147803317	147804000	(42410555)	C	L1MA4	LINE/L1	(0)	6300	5593	2996280
2524	23.4	5.0	11.3	chr4	152508087	152508410	(37706145)	+	L1MC4a	LINE/L1	6882	7184	(698)	3003085
1604	15.5	2.0	0.8	chr4	152508411	152508655	(37705900)	+	AluJb	SINE/Alu	1	248	(64)	3003087
2524	23.4	5.0	11.3	chr4	152508656	152509375	(37705180)	+	L1MC4a	LINE/L1	7185	7856	(26)	3003085
1150	22.0	9.7	8.0	chr4	152739086	152739500	(37475055)	C	MLT1C	LTR/ERVL-MaLR	(39)	428	6	3003516
437	36.6	1.8	1.3	chr4	156915202	156915425	(33299130)	+	MER101-int	LTR/ERV1	5381	5605	(1034)	3009414
1744	14.6	4.3	0.8	chr4	156915535	156915801	(33298754)	+	AluSx	SINE/Alu	25	301	(11)	3009415
16	18.9	0.0	0.0	chr4	156971396	156971425	(33243130)	+	(C)n	Simple_repeat	1	30	(0)	3009494
17	22.0	5.8	4.3	chr4	156971449	156971535	(33243020)	+	(GGCGCC)n	Simple_repeat	1	92	(0)	3009495
993	26.8	7.3	3.2	chr4	163748666	163749005	(26465550)	C	MER70C	LTR/ERVL	(176)	355	1	3018477
11829	23.3	4.1	2.2	chr4	168026356	168029614	(22184941)	C	HUERS-P3-int	LTR/ERV1	(5701)	3218	28	3024277
13	13.2	6.1	0.0	chr4	170026518	170026550	(20188005)	+	G-rich	Low_complexity	1	35	(0)	3027259
394	27.9	9.5	5.5	chr4	170227845	170228294	(19986261)	C	MLT1H1	LTR/ERVL-MaLR	(39)	510	1	3027491
3537	8.0	3.1	0.0	chr4	172996190	172996550	(17218005)	+	L1PA13	LINE/L1	5792	6155	(8)	3030992
13	23.0	3.3	4.8	chr4	173529558	173529618	(16684937)	+	(CCGGCT)n	Simple_repeat	1	63	(0)	3031758
13	12.1	0.0	3.5	chr4	173529847	173529875	(16684680)	+	(CCCTC)n	Simple_repeat	1	29	(0)	3031759
22	23.4	1.0	7.1	chr4	176320228	176320324	(13894231)	+	(GGCCGG)n	Simple_repeat	1	98	(0)	3035383
13	0.0	0.0	0.0	chr4	176792219	176792235	(13422320)	+	(GGC)n	Simple_repeat	1	17	(0)	3036002
14	30.2	0.0	4.3	chr4	176792323	176792392	(13422163)	+	G-rich	Low_complexity	1	70	(0)	3036003
43	22.1	2.7	4.6	chr4	176792757	176792905	(13421650)	+	(GGC)n	Simple_repeat	1	153	(0)	3036004
2476	9.7	0.0	3.7	chr4	182298694	182299014	(7915541)	+	AluSx	SINE/Alu	4	312	(0)	3043234
20	19.9	1.6	3.2	chr4	182917179	182917239	(7297316)	+	(GCGCCCC)n	Simple_repeat	1	62	(0)	3044078
13	9.3	0.0	0.0	chr4	182917481	182917503	(7297052)	+	(GGGA)n	Simple_repeat	1	23	(0)	3044079
11	21.1	8.2	0.0	chr4	182917532	182917580	(7296975)	+	(TCCGCGG)n	Simple_repeat	1	53	(0)	3044080
829	29.5	9.2	1.5	chr4	185425025	185425426	(4789129)	C	L2	LINE/L2	(676)	2743	2308	3048266
253	29.9	3.3	6.7	chr4	185426565	185426705	(4787850)	+	L2c	LINE/L2	3272	3426	(0)	3048267
13	14.1	0.0	5.7	chr4	185535556	185535590	(4678965)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3048440
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1006	9.3	0.7	0.0	chr5	1594932	1595071	(179943188)	C	AluJr4	SINE/Alu	(171)	141	1	3056396
13	13.6	6.8	4.3	chr5	6633477	6633520	(174904739)	+	(GCC)n	Simple_repeat	1	47	(0)	3062115
545	27.3	6.3	1.4	chr5	10220428	10220639	(171317620)	C	L3	LINE/CR1	(72)	4027	3805	3066516
510	25.3	3.1	3.6	chr5	10249377	10249590	(171288669)	C	MIR	SINE/MIR	(32)	236	18	3066553
34	0.0	0.0	0.0	chr5	10249898	10249934	(171288325)	+	(A)n	Simple_repeat	1	37	(0)	3066554
285	33.3	1.9	1.2	chr5	10608640	10608800	(170929459)	+	L1M5	LINE/L1	4994	5155	(991)	3067229
338	20.0	1.4	0.0	chr5	10608916	10608985	(170929274)	C	MER96	DNA/hAT-Tip100	(104)	71	1	3067230
1008	18.5	13.3	5.1	chr5	10609026	10609271	(170928988)	+	MER33	DNA/hAT-Charlie	1	285	(39)	3067231
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
228	40.3	5.0	0.5	chr5	14873881	14874092	(166664167)	+	MamSINE1	SINE/tRNA-RTE	51	272	(18)	3072778
22	20.0	3.0	2.9	chr5	16936307	16936373	(164601886)	+	(CCCG)n	Simple_repeat	1	69	(0)	3075812
12	16.1	3.5	0.0	chr5	17216656	17216684	(164321575)	+	(TCTCC)n	Simple_repeat	1	30	(0)	3076464
697	19.6	6.4	4.1	chr5	31638707	31638903	(149899356)	+	MamRep488	DNA/hAT-Tip100	15	216	(3)	3095274
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
16	23.4	5.5	0.0	chr5	32173873	32173927	(149364332)	+	(GTC)n	Simple_repeat	1	58	(0)	3096322
14	12.1	0.0	3.5	chr5	32173926	32173954	(149364305)	+	(CGC)n	Simple_repeat	1	29	(0)	3096323
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
468	26.4	9.4	0.0	chr5	33488395	33488538	(148049721)	C	MIR	SINE/MIR	(12)	250	92	3098436
3875	19.8	10.8	6.8	chr5	33488612	33489690	(148048569)	C	LTR28C	LTR/ERV1	(1)	1128	1	3098437
2349	10.0	0.3	0.0	chr5	34182977	34183276	(147354983)	C	AluSc8	SINE/Alu	(10)	301	1	3099477
634	29.4	16.7	2.4	chr5	35696592	35697146	(145841113)	C	L2a	LINE/L2	(47)	3379	2761	3101761
604	27.0	7.8	0.5	chr5	37248712	37248912	(144289347)	+	L1MC5a	LINE/L1	1874	2090	(687)	3104088
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
193	30.0	5.4	1.4	chr5	37371870	37371940	(144166319)	C	L2c	LINE/L2	(23)	3364	3291	3104377
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
1549	15.7	6.2	3.9	chr5	42908845	42909175	(138629084)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3112242
1661	14.4	0.0	0.0	chr5	43065880	43066122	(138472137)	+	AluSx3	SINE/Alu	65	307	(4)	3112479
14	20.7	2.6	0.0	chr5	52989211	52989249	(128549010)	+	G-rich	Low_complexity	1	40	(0)	3119683
31	3.3	0.0	0.0	chr5	52989806	52989836	(128548423)	+	(AC)n	Simple_repeat	1	31	(0)	3119684
961	21.4	8.8	9.3	chr5	55328886	55329225	(126209034)	C	L1MEc	LINE/L1	(1932)	4450	4112	3123077
1377	16.5	1.2	4.0	chr5	55329226	55329473	(126208786)	C	AluJo	SINE/Alu	(71)	241	1	3123078
961	21.4	8.8	9.3	chr5	55329474	55329487	(126208772)	C	L1MEc	LINE/L1	(2271)	4111	4098	3123077
15375	11.8	2.9	3.8	chr5	56598982	56599853	(124938406)	C	Tigger1	DNA/TcMar-Tigger	(1540)	878	1	3125281
2233	24.5	3.9	9.0	chr5	57025669	57026626	(124511633)	+	L1MD2	LINE/L1	5283	6321	(13)	3125930
2215	12.7	0.0	0.0	chr5	57220461	57220759	(124317500)	C	AluSx1	SINE/Alu	(13)	299	1	3126412
6346	12.0	8.9	0.4	chr5	59760975	59762061	(121776198)	C	Tigger3b	DNA/TcMar-Tigger	(27)	1204	16	3129932
27	18.4	3.9	2.5	chr5	65035559	65035636	(116502623)	+	(GGAGGCG)n	Simple_repeat	1	81	(0)	3137271
404	18.9	13.2	1.5	chr5	65036021	65036154	(116502105)	C	L1ME4a	LINE/L1	(0)	6124	5973	3137272
303	30.8	10.6	3.0	chr5	65036193	65036393	(116501866)	C	L1ME4a	LINE/L1	(189)	5935	5718	3137272
21	18.5	1.3	7.6	chr5	65722126	65722203	(115816056)	+	G-rich	Low_complexity	1	79	(0)	3138300
15	0.0	0.0	0.0	chr5	66596841	66596859	(114941400)	+	(GCC)n	Simple_repeat	1	19	(0)	3139672
12	13.9	0.0	0.0	chr5	66596999	66597022	(114941237)	+	(AGG)n	Simple_repeat	1	24	(0)	3139673
24	6.9	0.0	0.0	chr5	66718165	66718195	(114820064)	+	(T)n	Simple_repeat	1	31	(0)	3139847
21	13.4	0.0	0.0	chr5	66718245	66718277	(114819982)	+	(T)n	Simple_repeat	1	33	(0)	3139847
237	29.7	13.3	2.6	chr5	66849641	66849754	(114688505)	+	L2c	LINE/L2	3248	3375	(12)	3140021
23	14.7	0.0	0.0	chr5	66860757	66860794	(114677465)	+	(A)n	Simple_repeat	1	38	(0)	3140038
2236	24.0	12.5	3.0	chr5	66872470	66872546	(114665713)	C	LTR82A	LTR/ERVL	(797)	75	3	3140051
246	26.2	1.2	3.6	chr5	66872717	66872799	(114665460)	+	UCON55	DNA/TcMar-Tigger	27	107	(85)	3140053
22	0.0	0.0	0.0	chr5	67170817	67170840	(114367419)	+	(A)n	Simple_repeat	1	24	(0)	3140441
1996	13.8	4.0	3.0	chr5	68972911	68973207	(112565052)	+	AluSx1	SINE/Alu	2	301	(11)	3142999
701	27.0	9.2	6.3	chr5	68973210	68973557	(112564702)	+	HAL1	LINE/L1	630	988	(1519)	3143000
22711	13.9	3.7	1.6	chr5	68973569	68977982	(112560277)	+	L1MA1	LINE/L1	14	4599	(2966)	3143001
374	27.2	8.4	9.2	chr5	69264062	69264397	(112273862)	+	HAL1	LINE/L1	835	1167	(1340)	3143636
13	22.1	4.1	2.0	chr5	72209571	72209619	(109328640)	+	(TGTGC)n	Simple_repeat	1	51	(0)	3148633
17	20.3	0.0	0.0	chr5	72209837	72209860	(109328399)	+	A-rich	Low_complexity	1	24	(0)	3148634
1018	18.7	0.6	0.6	chr5	72209861	72210043	(109328216)	+	FRAM	SINE/Alu	1	176	(0)	3148635
23	7.0	0.0	0.0	chr5	72692573	72692602	(108845657)	+	(AC)n	Simple_repeat	1	30	(0)	3149379
779	20.2	0.0	0.0	chr5	72693601	72693758	(108844501)	C	MER5A1	DNA/hAT-Charlie	(0)	166	9	3149380
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
18	19.8	0.0	4.0	chr5	73436796	73436845	(108101414)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3150475
486	27.2	2.5	3.1	chr5	74336426	74336588	(107201671)	+	AmnSINE1	SINE/5S-Deu-L2	334	495	(80)	3151824
246	27.9	1.2	1.2	chr5	74372278	74372357	(107165902)	C	MIR	SINE/MIR	(96)	166	87	3151871
12	18.1	0.0	3.0	chr5	74685110	74685142	(106853117)	+	G-rich	Low_complexity	1	33	(0)	3152359
14	17.6	0.0	0.0	chr5	74685356	74685387	(106852872)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3152360
497	21.6	5.1	0.0	chr5	76221140	76221250	(105317009)	C	MLT1N2	LTR/ERVL-MaLR	(14)	548	432	3154655
11	24.6	0.0	2.5	chr5	76818919	76818958	(104719301)	+	(GCGGAGG)n	Simple_repeat	1	40	(0)	3155688
14	20.1	2.0	4.0	chr5	76818945	76818993	(104719266)	+	G-rich	Low_complexity	1	50	(0)	3155689
17	15.8	2.2	4.3	chr5	77492451	77492496	(104045763)	+	(GCG)n	Simple_repeat	1	47	(0)	3156732
467	22.1	17.6	5.4	chr5	77492785	77492932	(104045327)	C	MIRb	SINE/MIR	(23)	245	76	3156733
248	29.8	6.6	1.7	chr5	77623694	77623809	(103914450)	+	L3	LINE/CR1	3977	4098	(1)	3156910
27	19.2	4.4	5.9	chr5	77630146	77630258	(103908001)	+	G-rich	Low_complexity	1	118	(0)	3156916
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
918	11.2	0.0	0.8	chr5	81970706	81970830	(99567429)	C	AluJo	SINE/Alu	(188)	124	1	3163938
584	29.7	0.5	1.1	chr5	82988385	82988568	(98549691)	C	MamRep38	DNA/hAT	(112)	183	1	3165366
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
3160	22.6	6.0	2.6	chr5	85494880	85495910	(96042349)	+	L1MA7	LINE/L1	2837	3968	(2880)	3168572
107	3.6	0.9	0.0	chr5	88676322	88676436	(92861823)	+	(TCC)n	Simple_repeat	1	116	(0)	3172658
2002	14.5	0.7	1.9	chr5	90401841	90402151	(91136108)	C	AluJo	SINE/Alu	(5)	307	1	3174705
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
12	27.1	0.0	2.2	chr5	90529746	90529791	(91008468)	+	G-rich	Low_complexity	1	46	(0)	3174919
4935	11.5	1.4	0.6	chr5	93712688	93713743	(87824516)	+	L1M1	LINE/L1	4623	5695	(610)	3178991
324	28.1	10.5	2.3	chr5	93713758	93713888	(87824371)	C	L4_A_Mam	LINE/RTE-X	(254)	4736	4594	3178992
523	29.9	4.6	0.5	chr5	93713905	93714092	(87824167)	+	Charlie17a	DNA/hAT-Charlie	6	201	(16)	3178993
16	19.2	2.0	3.9	chr5	95731312	95731372	(85806887)	+	(GCAGCG)n	Simple_repeat	1	59	(0)	3181581
1850	6.2	0.9	0.0	chr5	95834684	95834908	(85703351)	C	AluSc	SINE/Alu	(9)	300	74	3181736
13	24.4	2.0	2.0	chr5	102670015	102670064	(78868195)	+	(ATTTTTT)n	Simple_repeat	1	51	(0)	3190420
18	12.0	0.0	0.0	chr5	103562811	103562837	(77975422)	+	(G)n	Simple_repeat	1	27	(0)	3191611
1885	23.7	3.0	5.8	chr5	104344609	104345158	(77193101)	C	MER44B	DNA/TcMar-Tigger	(14)	536	3	3192583
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
217	27.9	8.0	0.0	chr5	108748072	108748165	(72790094)	C	L2c	LINE/L2	(23)	3403	3276	3198087
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
389	28.0	8.6	4.0	chr5	115296014	115296236	(66242023)	C	MIRb	SINE/MIR	(0)	268	35	3206586
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
58	22.1	1.5	8.4	chr5	115296655	115296913	(66241346)	+	G-rich	Low_complexity	1	263	(0)	3206588
478	23.6	1.8	0.9	chr5	115947035	115947180	(65591079)	+	MLT1J2	LTR/ERVL-MaLR	60	206	(205)	3207521
15	16.9	0.0	0.0	chr5	116574585	116574617	(64963642)	+	G-rich	Low_complexity	1	33	(0)	3208281
14	24.7	0.0	2.2	chr5	120464396	120464440	(61073819)	+	(GCGGCA)n	Simple_repeat	1	45	(0)	3213552
16	18.2	3.2	6.2	chr5	122845518	122845580	(58692679)	+	G-rich	Low_complexity	1	65	(0)	3216525
10911	15.8	4.5	2.5	chr5	123936409	123938127	(57600132)	C	HUERS-P3b-int	LTR/ERV1	(7152)	1767	4	3218011
14	22.0	0.0	0.0	chr5	129460162	129460198	(52078061)	+	(CCACC)n	Simple_repeat	1	37	(0)	3225347
30	20.4	2.4	2.4	chr5	129904499	129904580	(51633679)	+	(GCC)n	Simple_repeat	1	84	(0)	3225896
407	36.3	0.5	3.9	chr5	130402798	130403029	(51135230)	+	MamRep137	DNA/TcMar-Tigger	109	332	(178)	3226532
1852	16.1	2.7	1.2	chr5	130403051	130403377	(51134882)	+	MER1B	DNA/hAT-Charlie	8	339	(0)	3226533
18	18.5	0.0	2.2	chr5	131164481	131164525	(50373734)	+	G-rich	Low_complexity	1	45	(0)	3227448
12	19.9	2.3	4.4	chr5	131164982	131165025	(50373234)	+	(TCCCC)n	Simple_repeat	1	45	(0)	3227449
508	31.9	3.8	5.8	chr5	131400436	131400834	(50137425)	+	L1M3d	LINE/L1	1	391	(5500)	3227896
1500	25.1	11.4	4.0	chr5	131400991	131401275	(50136984)	+	L1MB2	LINE/L1	1165	1694	(4974)	3227897
2200	19.5	7.6	1.1	chr5	131660206	131660744	(49877515)	+	LTR8A	LTR/ERV1	151	727	(0)	3228334
17	24.2	1.6	3.2	chr5	132369671	132369732	(49168527)	+	(CCCGC)n	Simple_repeat	1	63	(0)	3229279
534	32.6	4.8	4.2	chr5	132417308	132417445	(49120814)	+	L2b	LINE/L2	2654	2794	(625)	3229332
2057	15.0	13.4	3.1	chr5	132417446	132417893	(49120366)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	3229333
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
374	18.6	10.2	0.0	chr5	134873855	134873951	(46664308)	+	MER53	DNA/hAT	86	193	(0)	3233563
13	10.8	6.7	0.0	chr5	136132815	136132844	(45405415)	+	(CCTC)n	Simple_repeat	1	32	(0)	3235278
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
328	23.8	9.0	5.2	chr5	138027678	138027707	(43510552)	+	Charlie23a	DNA/hAT-Charlie	141	169	(170)	3237951
1899	13.3	12.0	2.9	chr5	138027708	138028047	(43510212)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3237952
195	31.6	6.4	8.6	chr5	138077398	138077525	(43460734)	+	L2c	LINE/L2	3263	3387	(0)	3238070
665	9.5	5.0	0.0	chr5	138752467	138752561	(42785698)	+	AluJo	SINE/Alu	11	110	(202)	3239535
974	13.5	1.4	0.0	chr5	138752563	138752703	(42785556)	+	FRAM	SINE/Alu	18	160	(16)	3239536
234	26.0	6.1	1.3	chr5	138752718	138752795	(42785464)	+	MIR3	SINE/MIR	116	197	(11)	3239537
15	7.8	3.7	0.0	chr5	138753605	138753631	(42784628)	+	(GCGG)n	Simple_repeat	1	28	(0)	3239540
2107	13.1	0.0	1.4	chr5	139076849	139077145	(42461114)	+	AluSc8	SINE/Alu	1	293	(18)	3240051
318	32.2	5.9	3.4	chr5	139207863	139208010	(42330249)	C	MIRc	SINE/MIR	(1)	267	116	3240284
251	27.5	10.1	0.0	chr5	139208174	139208253	(42330006)	C	L2c	LINE/L2	(1)	3425	3337	3240285
1561	15.0	1.5	3.3	chr5	139292973	139293245	(42245014)	+	AluJr	SINE/Alu	1	268	(44)	3240505
17	13.7	0.0	0.0	chr5	140043211	140043266	(41494993)	+	(GCAGC)n	Simple_repeat	1	56	(0)	3241899
637	27.0	6.0	2.7	chr5	140338889	140339127	(41199132)	+	MIRc	SINE/MIR	21	263	(5)	3242416
2249	11.9	0.0	0.3	chr5	140339381	140339692	(41198567)	C	AluSq2	SINE/Alu	(1)	312	2	3242417
273	31.6	3.0	0.0	chr5	140363175	140363272	(41174987)	+	MIRc	SINE/MIR	31	131	(137)	3242460
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
857	20.2	4.7	3.2	chr5	142794957	142795145	(38743114)	C	MER58C	DNA/hAT-Charlie	(0)	215	24	3246676
550	20.8	7.5	7.5	chr5	142795150	142795310	(38742949)	+	MIRb	SINE/MIR	29	189	(79)	3246677
691	33.1	11.4	2.8	chr5	145836199	145836413	(35701846)	+	L2	LINE/L2	1172	1385	(2034)	3251379
21	15.3	2.1	5.0	chr5	149271777	149271834	(32266425)	+	G-rich	Low_complexity	1	56	(0)	3257348
201	20.5	0.0	2.5	chr5	149272550	149272589	(32265670)	+	L3	LINE/CR1	4042	4080	(19)	3257347
277	35.9	2.5	6.0	chr5	150115433	150115598	(31422661)	C	MIR3	SINE/MIR	(19)	189	30	3259242
2153	17.2	5.2	7.0	chr5	150313397	150313870	(31224389)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	3259674
2604	25.9	9.7	8.0	chr5	150313871	150314079	(31224180)	+	Arthur1B	DNA/hAT-Tip100	721	940	(285)	3259672
498	26.8	14.4	0.6	chr5	150574528	150574707	(30963552)	+	MIR	SINE/MIR	54	262	(0)	3260271
2582	13.8	1.3	0.7	chr5	150992196	150992655	(30545604)	C	LTR46-int	LTR/ERV1	(5700)	1285	823	3260937
3475	13.9	0.9	0.4	chr5	150992754	150993310	(30544949)	C	LTR46-int	LTR/ERV1	(6425)	560	1	3260937
443	23.6	11.6	3.3	chr5	151742622	151742751	(29795508)	C	MIR3	SINE/MIR	(49)	159	18	3262542
12	16.3	2.8	2.7	chr5	151772241	151772276	(29765983)	+	(GCGCGT)n	Simple_repeat	1	37	(0)	3262615
1330	17.4	1.0	13.0	chr5	151788402	151788572	(29749687)	C	AluJo	SINE/Alu	(13)	299	130	3262641
48	0.0	0.0	0.0	chr5	151788573	151788613	(29749646)	+	(TG)n	Simple_repeat	1	41	(0)	3262642
1330	17.4	1.0	13.0	chr5	151788614	151788780	(29749479)	C	AluJo	SINE/Alu	(183)	129	2	3262641
2229	11.3	1.0	0.0	chr5	151788783	151789074	(29749185)	C	AluSp	SINE/Alu	(18)	295	1	3262643
269	30.3	7.9	3.8	chr5	153775058	153775215	(27763044)	+	MER124	DNA?	20	184	(213)	3265865
235	23.7	9.7	2.1	chr5	153775291	153775385	(27762874)	+	MER124	DNA?	295	397	(0)	3265866
447	31.5	3.2	5.6	chr5	158154224	158154367	(23383892)	C	MIRb	SINE/MIR	(121)	147	1	3274116
490	25.2	0.0	0.9	chr5	158154672	158154783	(23383476)	C	MER117	DNA/hAT-Charlie	(40)	157	47	3274118
1750	15.8	3.7	3.7	chr5	159149130	159149427	(22388832)	C	AluJb	SINE/Alu	(14)	298	1	3275630
2245	23.2	2.9	2.1	chr5	159393811	159394325	(22143934)	C	LTR53	LTR/ERVL	(0)	519	1	3276008
1155	26.4	6.8	5.2	chr5	163308831	163309325	(18228934)	+	HAL1	LINE/L1	43	545	(1962)	3282333
291	27.1	14.0	5.1	chr5	163309366	163309540	(18228719)	+	HAL1	LINE/L1	764	956	(1551)	3282333
4907	11.8	4.1	1.9	chr5	163915009	163915789	(17622470)	C	LTR1A1	LTR/ERV1	(0)	799	1	3283277
8983	18.2	2.6	0.2	chr5	164131595	164133179	(17405080)	+	MSTA-int	LTR/ERVL-MaLR	1	1625	(6)	3283592
1335	12.2	0.0	2.5	chr5	168742867	168743062	(12795197)	+	AluSc	SINE/Alu	21	211	(98)	3290686
15831	12.1	2.3	1.2	chr5	168743193	168744007	(12794252)	+	Tigger1	DNA/TcMar-Tigger	4	854	(1564)	3290687
947	27.6	9.1	0.2	chr5	170344573	170345101	(11193158)	C	L2a	LINE/L2	(9)	3417	2821	3293425
876	16.6	0.0	3.5	chr5	171093083	171093227	(10445032)	+	AluSq2	SINE/Alu	156	295	(18)	3294697
22	12.0	0.0	5.9	chr5	171450714	171450764	(10087495)	+	G-rich	Low_complexity	1	51	(0)	3295312
14	21.5	4.0	1.9	chr5	171450923	171450972	(10087287)	+	(GCCCGC)n	Simple_repeat	1	52	(0)	3295313
16	19.2	2.0	3.9	chr5	171451034	171451097	(10087162)	+	(CCCCGCC)n	Simple_repeat	1	62	(0)	3295314
22	24.2	0.0	0.0	chr5	171451215	171451272	(10086987)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3295315
15	5.6	0.0	0.0	chr5	171807243	171807261	(9730998)	+	(T)n	Simple_repeat	1	19	(0)	3296087
342	23.1	0.0	1.3	chr5	173187195	173187273	(8350986)	+	Charlie17a	DNA/hAT-Charlie	36	113	(104)	3299119
784	30.8	8.7	4.3	chr5	173187287	173187762	(8350497)	+	Charlie17b	DNA/hAT-Charlie	158	649	(555)	3299120
109	22.5	2.1	6.2	chr5	174418725	174419105	(7119154)	+	GA-rich	Low_complexity	1	389	(0)	3301474
495	25.9	7.7	1.6	chr5	174421275	174421456	(7116803)	+	MIRc	SINE/MIR	18	204	(58)	3301477
307	35.6	7.3	0.0	chr5	174421436	174421651	(7116608)	C	MIRb	SINE/MIR	(0)	268	36	3301478
2273	9.8	1.0	0.3	chr5	174421883	174422177	(7116082)	C	AluSg4	SINE/Alu	(13)	297	1	3301479
678	18.3	2.2	0.0	chr5	174910589	174910719	(6627540)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	3302458
2272	10.6	0.0	0.0	chr5	174911040	174911340	(6626919)	C	AluSx1	SINE/Alu	(11)	301	1	3302459
368	31.4	0.0	8.8	chr5	175478003	175478173	(6060086)	+	L2a	LINE/L2	2676	2831	(588)	3303489
21	20.7	0.7	8.0	chr5	175478417	175478508	(6059751)	+	G-rich	Low_complexity	1	85	(0)	3303490
393	25.6	7.2	4.4	chr5	175920978	175921113	(5617146)	+	MIRb	SINE/MIR	91	229	(1)	3304414
557	24.9	10.3	5.6	chr5	175921596	175921808	(5616451)	+	Charlie8	DNA/hAT-Charlie	41	264	(2164)	3304415
2527	25.7	15.5	11.0	chr5	176319672	176320331	(5217928)	C	HAL1	LINE/L1	(1407)	1100	340	3304996
1740	16.4	0.3	1.4	chr5	176320332	176320668	(5217591)	C	AluJb	SINE/Alu	(0)	312	1	3305001
5217	17.1	13.5	1.1	chr5	176687280	176688648	(4849611)	C	MER52A	LTR/ERV1	(0)	2123	503	3305800
262	28.2	6.6	0.0	chr5	176781778	176781862	(4756397)	+	MER91C	DNA/hAT-Tip100	48	138	(2)	3305978
265	30.1	4.2	6.1	chr5	176791505	176791690	(4746569)	+	L2a	LINE/L2	3064	3256	(170)	3306001
291	23.1	7.9	1.5	chr5	177005555	177005709	(4532550)	C	MIRb	SINE/MIR	(78)	190	2	3306398
243	30.6	1.6	0.0	chr5	177005789	177005850	(4532409)	+	MIR	SINE/MIR	12	74	(188)	3306399
2289	25.7	14.6	7.6	chr5	177317094	177318607	(4219652)	C	MER21-int	LTR/ERVL	(1106)	3085	1452	3307164
538	28.7	8.8	2.4	chr5	177448938	177449234	(4089025)	C	MER102a	DNA/hAT-Charlie	(0)	330	1	3307440
230	38.5	2.9	0.7	chr5	177449377	177449513	(4088746)	C	MIRb	SINE/MIR	(114)	154	3	3307441
215	21.1	5.5	0.0	chr5	177449558	177449609	(4088650)	C	MIR1_Amn	SINE/MIR	(61)	169	115	3307442
30	25.8	0.0	0.0	chr5	177672176	177672253	(3866006)	+	(GGC)n	Simple_repeat	1	78	(0)	3307830
23	10.1	5.1	4.8	chr5	177672264	177672322	(3865937)	+	(GCCCC)n	Simple_repeat	1	62	(0)	3307831
12	10.6	2.9	5.7	chr5	178232817	178232850	(3305409)	+	(CGCCC)n	Simple_repeat	1	35	(0)	3308834
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2516	4.1	0.3	0.7	chr5	178729873	178730164	(2808095)	C	AluY	SINE/Alu	(20)	291	1	3309714
2356	19.5	4.8	3.3	chr5	178858901	178859711	(2678548)	C	L1MA9	LINE/L1	(534)	5778	4872	3309952
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
3197	17.9	10.1	3.2	chr5	179463727	179464198	(2074061)	C	L1MB8	LINE/L1	(495)	5683	5175	3310859
5198	11.2	3.4	0.7	chr5	179464199	179464972	(2073287)	C	LTR1A1	LTR/ERV1	(3)	796	1	3310862
19	9.8	0.0	2.9	chr5	179550513	179550547	(1987712)	+	(GCCC)n	Simple_repeat	1	35	(0)	3311065
24	26.9	0.0	0.0	chr5	179550600	179550667	(1987592)	+	G-rich	Low_complexity	1	68	(0)	3311066
13	15.7	9.3	0.0	chr5	179550804	179550846	(1987413)	+	(GCGCGCT)n	Simple_repeat	1	47	(0)	3311067
395	19.4	8.2	5.0	chr5	179686398	179686438	(1851821)	C	L1M5	LINE/L1	(845)	5334	5293	3311369
1479	18.3	5.0	2.4	chr5	179686473	179686762	(1851497)	C	AluJb	SINE/Alu	(11)	301	4	3311370
2164	13.2	0.7	0.0	chr5	179686775	179687076	(1851183)	C	AluSq2	SINE/Alu	(9)	304	1	3311371
559	28.6	3.9	0.0	chr5	180180722	180180892	(1357367)	C	L1ME3A	LINE/L1	(3)	6170	5993	3312186
525	22.2	6.0	3.2	chr5	180181209	180181344	(1356915)	+	L1MEc	LINE/L1	1854	2005	(4395)	3312187
18	0.0	0.0	0.0	chr5	180352340	180352359	(1185900)	+	(A)n	Simple_repeat	1	20	(0)	3312465
399	27.7	5.2	1.8	chr5	180394505	180394673	(1143586)	C	MER90a	LTR/ERV1	(144)	470	296	3312556
678	25.2	4.7	1.3	chr5	180399429	180399653	(1138606)	+	MLT1K	LTR/ERVL-MaLR	3	235	(360)	3312567
320	25.8	7.0	5.0	chr5	180399708	180400009	(1138250)	+	MLT1J2	LTR/ERVL-MaLR	112	448	(0)	3312568
12	17.5	3.1	0.0	chr5	180649090	180649121	(889138)	+	(CGGCG)n	Simple_repeat	1	33	(0)	3313019
16	16.8	1.9	5.7	chr5	180649257	180649308	(888951)	+	(GGCCC)n	Simple_repeat	1	53	(0)	3313020
23	10.6	0.0	9.7	chr5	180649605	180649666	(888593)	+	G-rich	Low_complexity	1	62	(0)	3313021
690	17.8	0.0	3.1	chr5	181182541	181182669	(355590)	C	FLAM_C	SINE/Alu	(18)	125	1	3313811
1480	20.1	1.1	2.5	chr5	181182765	181183042	(355217)	+	AluJo	SINE/Alu	39	312	(0)	3313812
2053	19.6	3.8	1.5	chr6	147987	149049	(170656930)	C	TAR1	Satellite/telo	(237)	1087	1	3314432
223	33.7	9.5	0.0	chr6	1868629	1868714	(168937265)	C	MIRc	SINE/MIR	(169)	99	5	3316669
328	32.2	2.0	1.3	chr6	2033724	2033874	(168772105)	C	MER5A	DNA/hAT-Charlie	(1)	188	37	3316873
28	23.7	1.0	5.0	chr6	2226006	2226104	(168579875)	+	GA-rich	Low_complexity	1	100	(0)	3317134
15	25.2	4.3	2.8	chr6	2245428	2245498	(168560481)	+	(GGCG)n	Simple_repeat	1	72	(0)	3317164
436	10.0	0.0	0.0	chr6	2971882	2971941	(167834038)	+	MER41B	LTR/ERV1	130	189	(445)	3318180
2215	8.2	5.8	0.0	chr6	2971943	2972236	(167833743)	+	AluSz	SINE/Alu	1	312	(0)	3318181
314	23.9	3.2	1.1	chr6	2999364	2999456	(167806523)	C	L1MD2	LINE/L1	(456)	5903	5809	3318232
51	22.4	3.1	5.0	chr6	2999648	2999841	(167806138)	+	G-rich	Low_complexity	1	200	(0)	3318233
1000	24.8	5.3	0.0	chr6	3162251	3162484	(167643495)	+	MIR	SINE/MIR	15	261	(1)	3318494
28	17.7	0.0	3.2	chr6	3162495	3162557	(167643422)	+	(TCCC)n	Simple_repeat	1	63	(0)	3318495
5442	15.3	4.8	3.3	chr6	3462491	3463574	(167342405)	+	L1MC3	LINE/L1	6685	7785	(0)	3318924
52	19.4	3.3	0.0	chr6	3857514	3857633	(166948346)	+	(TATATG)n	Simple_repeat	1	124	(0)	3319548
1073	22.6	14.1	3.8	chr6	3857846	3858213	(166947766)	+	MLT1F	LTR/ERVL-MaLR	1	412	(136)	3319549
61	29.6	3.0	5.6	chr6	4135582	4135982	(166669997)	+	G-rich	Low_complexity	1	413	(0)	3320017
4237	13.2	1.8	3.0	chr6	6687670	6688393	(164117586)	C	L1PA17	LINE/L1	(17)	6149	5435	3323759
8374	17.8	5.7	7.2	chr6	6844284	6846287	(163959692)	C	L1MC3	LINE/L1	(0)	7785	5810	3324028
15	18.8	7.0	1.6	chr6	7541463	7541519	(163264460)	+	(GGCGCAG)n	Simple_repeat	1	61	(0)	3325356
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
2323	10.6	0.0	0.0	chr6	7590696	7590996	(163214983)	+	AluJb	SINE/Alu	1	301	(11)	3325413
25	29.9	0.9	3.5	chr6	7727003	7727136	(163078843)	+	(GCCGCC)n	Simple_repeat	1	130	(0)	3325636
13	17.0	3.0	0.0	chr6	7727218	7727250	(163078729)	+	(GGCCCC)n	Simple_repeat	1	34	(0)	3325637
24	25.3	0.0	0.0	chr6	7727253	7727313	(163078666)	+	(CAG)n	Simple_repeat	1	61	(0)	3325638
410	37.0	4.1	2.1	chr6	8114827	8115116	(162690863)	C	L2	LINE/L2	(434)	2985	2690	3326198
372	29.6	9.5	6.3	chr6	8115119	8115403	(162690576)	C	MLT1G3	LTR/ERVL-MaLR	(2)	510	216	3326199
1233	22.3	10.8	1.3	chr6	8115579	8115896	(162690083)	+	MLT1J	LTR/ERVL-MaLR	33	384	(128)	3326200
1370	20.6	10.8	5.3	chr6	9898821	9899255	(160906724)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	3328673
181	41.2	0.0	0.0	chr6	10048811	10048895	(160757084)	C	MIR1_Amn	SINE/MIR	(99)	131	47	3328877
22	15.1	4.8	3.0	chr6	12009028	12009090	(158796889)	+	(GCGGAGG)n	Simple_repeat	1	66	(0)	3332068
28	3.3	0.0	0.0	chr6	12009115	12009145	(158796834)	+	(GGC)n	Simple_repeat	1	31	(0)	3332069
1506	23.1	2.3	5.8	chr6	12663616	12663969	(158142010)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	118	3333013
2760	0.4	0.0	0.0	chr6	12663970	12664278	(158141701)	C	AluYa5	SINE/Alu	(0)	311	1	3333014
2312	11.7	0.0	0.0	chr6	13196412	13196718	(157609261)	C	AluSg	SINE/Alu	(3)	307	1	3333851
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
12	25.3	0.0	5.8	chr6	13574519	13574570	(157231409)	+	GA-rich	Low_complexity	1	52	(0)	3334517
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
17	18.2	1.8	5.4	chr6	13814560	13814614	(156991365)	+	G-rich	Low_complexity	1	56	(0)	3334957
1378	29.6	2.2	0.2	chr6	14321878	14322270	(156483709)	C	LTR16A	LTR/ERVL	(44)	407	7	3335794
1124	23.0	9.0	2.5	chr6	14322281	14322601	(156483378)	C	LTR16A2	LTR/ERVL	(115)	380	37	3335795
1529	20.4	4.5	8.2	chr6	14682350	14682788	(156123191)	+	MLT1C	LTR/ERVL-MaLR	1	422	(45)	3336378
697	19.0	0.0	0.7	chr6	14682801	14682943	(156123036)	+	L1MB5	LINE/L1	6025	6166	(8)	3336377
1553	22.7	2.3	1.1	chr6	14977024	14977371	(155828608)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	116	3336915
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
15	5.6	0.0	0.0	chr6	15663182	15663200	(155142779)	+	(T)n	Simple_repeat	1	19	(0)	3338220
4200	20.1	8.7	2.8	chr6	16135890	16137189	(154668790)	C	L1ME2z	LINE/L1	(87)	6357	4978	3339050
23	6.3	3.0	0.0	chr6	16947954	16947986	(153857993)	+	(GT)n	Simple_repeat	1	34	(0)	3340306
31	0.0	0.0	0.0	chr6	17102344	17102372	(153703607)	+	(AAAC)n	Simple_repeat	1	29	(0)	3340539
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
15	30.2	1.6	0.0	chr6	17393764	17393824	(153412155)	+	G-rich	Low_complexity	1	62	(0)	3341080
490	28.9	9.8	1.4	chr6	17496202	17496415	(153309564)	+	MER103C	DNA/hAT-Charlie	1	234	(63)	3341257
827	18.2	0.0	0.0	chr6	17496493	17496624	(153309355)	C	FLAM_C	SINE/Alu	(10)	133	2	3341258
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
278	33.4	10.1	3.3	chr6	18088737	18089039	(152716940)	C	LTR78	LTR/ERV1	(826)	478	153	3342413
16	0.0	0.0	0.0	chr6	18199700	18199716	(152606263)	+	(T)n	Simple_repeat	1	17	(0)	3342637
1003	28.9	8.6	4.0	chr6	21012340	21013085	(149792894)	C	MLT1J-int	LTR/ERVL-MaLR	(13)	1374	533	3346994
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
243	33.7	12.5	3.2	chr6	24961011	24961333	(145844646)	C	L2b	LINE/L2	(6)	3369	3039	3352838
298	12.3	8.1	0.0	chr6	24961484	24961540	(145844439)	+	MIRc	SINE/MIR	88	149	(119)	3352839
712	27.9	5.8	1.3	chr6	24961591	24961633	(145844346)	C	MIR	SINE/MIR	(13)	249	209	3352840
2330	9.9	1.7	0.7	chr6	24961634	24961926	(145844053)	C	AluSx1	SINE/Alu	(16)	296	1	3352841
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
2198	7.9	0.7	0.7	chr6	26189446	26189754	(144616225)	C	AluSg4	SINE/Alu	(0)	310	1	3354800
668	0.0	0.0	0.0	chr6	26554122	26554195	(144251784)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3355457
708	11.4	0.0	0.0	chr6	27157266	27157353	(143648626)	+	AluSz	SINE/Alu	1	88	(224)	3356394
661	2.8	0.0	0.0	chr6	27158127	27158198	(143647781)	+	tRNA-His-CAY_	tRNA	1	72	(3)	3356395
1354	19.2	3.9	0.6	chr6	27178168	27178461	(143627518)	+	LTR10B2	LTR/ERV1	201	500	(3)	3356434
20	20.6	0.0	0.0	chr6	27605289	27605327	(143200652)	+	(T)n	Simple_repeat	1	39	(0)	3357207
590	0.0	0.0	22.9	chr6	27605637	27605745	(143200234)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357208
1989	13.5	1.0	1.6	chr6	28211860	28212170	(142593809)	C	AluJb	SINE/Alu	(3)	309	1	3358257
32	3.2	0.0	0.0	chr6	28350085	28350116	(142455863)	+	(TG)n	Simple_repeat	1	32	(0)	3358488
593	5.6	0.0	0.0	chr6	28817235	28817306	(141988673)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359275
194	16.3	0.0	8.5	chr6	28897263	28897309	(141908670)	+	L2a	LINE/L2	3366	3408	(18)	3359413
19	3.5	3.5	0.0	chr6	29748630	29748658	(141057321)	+	(GAGAG)n	Simple_repeat	1	30	(0)	3360608
1795	13.3	0.7	9.1	chr6	30516755	30517084	(140288895)	C	AluSx1	SINE/Alu	(10)	302	1	3361728
9746	11.5	6.1	8.6	chr6	30859284	30860464	(139945515)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	541	3362393
14	20.0	2.4	2.3	chr6	31403922	31403963	(139402016)	+	(CTC)n	Simple_repeat	1	43	(0)	3363284
2457	5.7	1.3	0.0	chr6	31494551	31494850	(139311129)	+	AluSp	SINE/Alu	2	305	(8)	3363403
13	23.8	2.2	2.1	chr6	31615971	31616016	(139189963)	+	(TCC)n	Simple_repeat	1	47	(0)	3363630
47	0.0	0.0	0.0	chr6	31652321	31652360	(139153619)	+	(AC)n	Simple_repeat	1	40	(0)	3363672
463	25.9	4.0	2.7	chr6	32947614	32947760	(137858219)	C	MIR	SINE/MIR	(98)	164	16	3365644
14	13.0	6.5	4.1	chr6	33425973	33426018	(137379961)	+	G-rich	Low_complexity	1	49	(0)	3366427
255	31.0	8.2	4.6	chr6	33567138	33567289	(137238690)	+	L2b	LINE/L2	3121	3278	(97)	3366750
17	7.3	3.5	0.0	chr6	33567408	33567436	(137238543)	+	(TGG)n	Simple_repeat	1	30	(0)	3366751
1587	17.4	4.7	0.8	chr6	34415864	34415982	(136389997)	C	AluJb	SINE/Alu	(193)	119	1	3368336
2284	11.4	1.6	0.0	chr6	34416523	34416828	(136389151)	+	AluSx1	SINE/Alu	1	311	(1)	3368338
235	10.5	0.0	0.0	chr6	34430074	34430111	(136375868)	+	L1MEd	LINE/L1	1341	1378	(5708)	3368373
348	29.8	5.3	0.0	chr6	34430162	34430285	(136375694)	+	L2b	LINE/L2	2759	2889	(530)	3368376
1548	14.0	10.1	3.9	chr6	34430286	34430564	(136375415)	C	AluSz6	SINE/Alu	(12)	300	3	3368377
241	31.7	0.8	3.1	chr6	34527038	34527164	(136278815)	+	ORSL-2b	DNA/hAT-Tip100	359	482	(26)	3368606
25	25.1	0.9	6.2	chr6	34527180	34527290	(136278689)	+	G-rich	Low_complexity	1	112	(0)	3368607
444	31.8	13.0	4.7	chr6	34716294	34716453	(136089526)	+	MIRb	SINE/MIR	8	181	(87)	3368999
2262	9.6	2.4	0.0	chr6	34716454	34716744	(136089235)	+	AluSx1	SINE/Alu	1	298	(14)	3369000
186	28.9	9.1	3.2	chr6	35259014	35259106	(135546873)	+	MIRc	SINE/MIR	98	196	(72)	3369992
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
463	21.1	2.1	0.0	chr6	35342211	35342305	(135463674)	+	MIR3	SINE/MIR	96	192	(16)	3370168
714	18.5	17.7	1.3	chr6	35501206	35501225	(135304754)	+	L2a	LINE/L2	2801	2820	(599)	3370495
1566	17.1	4.3	4.6	chr6	35501226	35501529	(135304450)	+	AluJb	SINE/Alu	2	304	(8)	3370496
12	9.7	5.4	5.1	chr6	36839950	36839986	(133965993)	+	(GGCTCCG)n	Simple_repeat	1	39	(0)	3373406
26	18.9	0.0	0.0	chr6	36840090	36840138	(133965841)	+	(GT)n	Simple_repeat	1	49	(0)	3373407
483	24.9	1.1	11.3	chr6	37242881	37243075	(133562904)	C	MLT1L	LTR/ERVL-MaLR	(305)	305	131	3374328
411	30.6	10.5	3.5	chr6	37243222	37243424	(133562555)	+	MLT1J	LTR/ERVL-MaLR	32	250	(262)	3374329
1040	26.3	8.5	10.1	chr6	37896084	37896507	(132909472)	C	L1M5	LINE/L1	(2051)	4095	3689	3375581
96	2.7	0.8	4.0	chr6	37896508	37896631	(132909348)	+	(TCTT)n	Simple_repeat	1	125	(0)	3375582
1040	25.3	8.4	9.5	chr6	37896632	37896666	(132909313)	C	L1M5	LINE/L1	(2455)	3691	3685	3375581
33	3.1	0.0	0.0	chr6	37896667	37896699	(132909280)	+	(TG)n	Simple_repeat	1	33	(0)	3375583
1040	25.3	8.4	9.5	chr6	37896700	37897026	(132908953)	C	L1M5	LINE/L1	(2462)	3684	3338	3375581
829	22.7	10.2	10.2	chr6	38688296	38688579	(132117400)	+	MER90	LTR/ERV1	1	284	(291)	3376792
644	22.9	3.5	4.0	chr6	38688580	38688752	(132117227)	+	MER76	LTR/ERVL	1	172	(519)	3376793
1101	24.6	7.9	8.0	chr6	38688767	38689291	(132116688)	+	MLT1E2	LTR/ERVL-MaLR	61	565	(62)	3376794
2095	14.3	0.3	0.3	chr6	38947748	38948047	(131857932)	C	AluSx	SINE/Alu	(12)	300	1	3377257
259	17.8	2.2	0.0	chr6	38948170	38948214	(131857765)	+	MIR	SINE/MIR	79	124	(138)	3377258
2069	9.3	7.6	0.4	chr6	39175665	39175943	(131630036)	+	AluSq2	SINE/Alu	1	301	(12)	3377597
484	28.2	9.1	0.4	chr6	39175960	39176201	(131629778)	+	L1MC5a	LINE/L1	2313	2577	(200)	3377598
618	11.0	0.0	0.0	chr6	39176225	39176315	(131629664)	+	L1PB3	LINE/L1	6064	6154	(0)	3377599
1076	29.4	5.1	5.1	chr6	40175451	40175495	(130630484)	C	CR1_Mam	LINE/CR1	(935)	1269	1227	3379033
3567	16.1	0.5	0.5	chr6	40175496	40176074	(130629905)	C	MER34D	LTR/ERV1	(0)	579	1	3379034
12	19.4	0.0	5.1	chr6	41427837	41427875	(129378104)	+	G-rich	Low_complexity	1	39	(0)	3381138
360	32.5	2.8	0.9	chr6	41538212	41538354	(129267625)	+	MIRb	SINE/MIR	11	162	(106)	3381362
1542	26.4	5.5	0.2	chr6	41538363	41538761	(129267218)	C	LTR16C	LTR/ERVL	(0)	489	69	3381363
243	30.6	1.4	0.0	chr6	41538819	41538890	(129267089)	+	MIRb	SINE/MIR	165	237	(31)	3381362
25	22.5	1.8	7.0	chr6	41894989	41895100	(128910879)	+	(GGCCCCC)n	Simple_repeat	1	114	(0)	3382035
14	30.2	3.6	2.3	chr6	41895231	41895314	(128910665)	+	(CCTCCCC)n	Simple_repeat	1	87	(0)	3382036
2276	9.8	0.7	0.3	chr6	41933345	41933641	(128872338)	+	AluSx	SINE/Alu	1	298	(14)	3382120
2116	15.3	0.0	0.6	chr6	42187409	42187722	(128618257)	C	AluJb	SINE/Alu	(0)	312	1	3382747
609	21.4	7.2	10.0	chr6	42187723	42187842	(128618137)	C	L1M5	LINE/L1	(3044)	3102	3023	3382745
1992	15.9	0.3	0.0	chr6	42187843	42188144	(128617835)	C	AluJr	SINE/Alu	(8)	304	2	3382748
685	16.4	1.7	0.9	chr6	42778699	42778814	(128027165)	+	AluJo	SINE/Alu	1	117	(195)	3384010
1551	9.4	0.0	4.2	chr6	42778836	42779047	(128026932)	C	AluSx1	SINE/Alu	(30)	282	80	3384011
410	10.5	0.0	1.8	chr6	43149815	43149871	(127656108)	C	AluJo	SINE/Alu	(181)	131	76	3384792
20	6.5	0.0	2.9	chr6	44223992	44224025	(126581954)	+	(TGGGGA)n	Simple_repeat	1	34	(0)	3386814
199	33.4	12.8	6.3	chr6	46756610	46756973	(124049006)	+	L2	LINE/L2	1908	2298	(1121)	3390680
6158	14.0	7.6	1.6	chr6	47484863	47486018	(123319961)	+	Tigger3b	DNA/TcMar-Tigger	1	1231	(0)	3391833
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
2316	7.1	0.7	3.9	chr6	53725499	53725806	(117080173)	+	AluSz	SINE/Alu	2	299	(13)	3400634
1966	14.6	5.0	2.1	chr6	54014379	54014707	(116791272)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3401053
549	33.5	2.2	3.5	chr6	54014815	54015046	(116790933)	C	MIRb	SINE/MIR	(16)	252	24	3401054
513	38.0	10.7	2.6	chr6	54156739	54157165	(116648814)	C	L2c	LINE/L2	(4)	3383	2918	3401261
25	0.0	0.0	0.0	chr6	56542429	56542455	(114263524)	+	(A)n	Simple_repeat	1	27	(0)	3404286
6676	24.4	9.8	3.1	chr6	66007041	66010799	(104795180)	C	L1MA4A	LINE/L1	(2808)	4754	724	3413795
16	0.0	0.0	0.0	chr6	69867094	69867110	(100938869)	+	(T)n	Simple_repeat	1	17	(0)	3418527
13	23.9	0.0	4.2	chr6	75206501	75206548	(95599431)	+	(ATCTCC)n	Simple_repeat	1	48	(0)	3425882
21	20.9	1.6	3.1	chr6	79537106	79537169	(91268810)	+	(CCACCT)n	Simple_repeat	1	65	(0)	3431371
731	21.8	0.0	0.0	chr6	79928728	79928881	(90877098)	C	AluJb	SINE/Alu	(0)	312	159	3431965
236	20.9	15.2	1.0	chr6	79929018	79929115	(90876864)	+	MIR1_Amn	SINE/MIR	49	162	(46)	3431966
235	15.2	6.1	0.0	chr6	82236712	82236757	(88569222)	+	LTR86A1	LTR/ERVL	465	513	(0)	3434839
8663	11.7	10.2	3.1	chr6	82930349	82931859	(87874120)	+	THE1C-int	LTR/ERVL-MaLR	8	1631	(0)	3435808
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
13	20.0	2.0	5.8	chr6	87156134	87156184	(83649795)	+	(CGCCTC)n	Simple_repeat	1	52	(0)	3441138
554	24.9	13.8	2.1	chr6	88873138	88873482	(81932497)	+	HAL1ME	LINE/L1	732	1176	(1289)	3443701
20549	12.7	3.6	1.3	chr6	89235624	89238268	(81567711)	C	L1PB1	LINE/L1	(3901)	2962	258	3444405
2213	7.7	1.0	1.7	chr6	89820075	89820374	(80985605)	+	AluSz	SINE/Alu	1	298	(14)	3445427
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
520	29.6	10.5	8.6	chr6	92922200	92922788	(77883191)	C	MLT1F1	LTR/ERVL-MaLR	(12)	583	1	3449464
732	6.2	45.9	3.6	chr6	99394273	99394485	(71411494)	C	AluSx	SINE/Alu	(9)	303	1	3457559
13	11.2	4.5	6.5	chr6	99520982	99521025	(71284954)	+	(GCCGGAG)n	Simple_repeat	1	46	(0)	3457774
17	13.2	0.0	2.9	chr6	99521007	99521041	(71284938)	+	GA-rich	Low_complexity	1	35	(0)	3457775
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
47	2.3	0.0	0.0	chr6	105402419	105402463	(65403516)	+	(CA)n	Simple_repeat	1	45	(0)	3465368
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
14	20.5	2.6	0.0	chr6	107114957	107114995	(63690984)	+	(CCCCCT)n	Simple_repeat	1	40	(0)	3468217
17	15.4	4.4	2.1	chr6	107115023	107115067	(63690912)	+	(GCC)n	Simple_repeat	1	47	(0)	3468218
16	23.3	0.0	0.0	chr6	107115364	107115398	(63690581)	+	(C)n	Simple_repeat	1	35	(0)	3468219
720	29.2	5.7	9.8	chr6	107194109	107194659	(63611320)	C	L1MC5a	LINE/L1	(203)	2574	2048	3468409
2535	7.8	0.3	1.0	chr6	107194671	107194966	(63611013)	+	AluSx1	SINE/Alu	2	295	(17)	3468410
15	24.7	1.4	5.7	chr6	107491266	107491334	(63314645)	+	(CCGCCT)n	Simple_repeat	1	70	(0)	3468958
2066	19.4	2.8	0.0	chr6	107966134	107966514	(62839465)	+	MER89	LTR/ERV1	166	557	(2)	3469671
3078	19.0	9.4	4.2	chr6	110491486	110492193	(60313786)	C	LTR8B	LTR/ERV1	(72)	748	1	3473730
1838	19.2	6.3	4.4	chr6	110492203	110492655	(60313324)	C	MER110A	LTR/ERV1	(6)	462	1	3473735
15	27.4	0.0	0.0	chr6	111259600	111259647	(59546332)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	3475317
456	22.7	4.3	2.1	chr6	111259722	111259858	(59546121)	+	MIRc	SINE/MIR	15	156	(74)	3475318
2211	9.8	1.7	0.3	chr6	111302623	111302908	(59503071)	+	AluSx	SINE/Alu	1	290	(22)	3475377
17	9.7	2.9	2.8	chr6	111872875	111872909	(58933070)	+	(GCG)n	Simple_repeat	1	36	(0)	3476292
16	18.7	4.7	0.0	chr6	111873142	111873184	(58932795)	+	(GGC)n	Simple_repeat	1	45	(0)	3476293
368	34.2	3.9	2.6	chr6	112288460	112288612	(58517367)	C	MIRb	SINE/MIR	(0)	268	114	3476896
600	20.0	5.2	0.0	chr6	112288613	112288722	(58517257)	+	FRAM	SINE/Alu	11	126	(50)	3476897
1211	14.8	0.0	0.0	chr6	113814095	113814270	(56991709)	C	AluSx1	SINE/Alu	(3)	309	134	3479160
674	25.3	9.1	11.2	chr6	113814273	113814571	(56991408)	+	HAL1	LINE/L1	779	1086	(1421)	3479161
14	15.3	2.6	2.6	chr6	113970813	113970850	(56835129)	+	(GCCCG)n	Simple_repeat	1	39	(0)	3479421
26	0.0	0.0	0.0	chr6	113970946	113970970	(56835009)	+	(CTG)n	Simple_repeat	1	25	(0)	3479422
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
1442	16.5	10.4	3.0	chr6	116665261	116665563	(54140416)	+	L1MC	LINE/L1	4938	5276	(870)	3482899
1759	17.2	0.0	5.5	chr6	116665564	116665889	(54140090)	C	AluJb	SINE/Alu	(3)	309	2	3482900
1442	16.5	10.4	3.0	chr6	116665890	116665922	(54140057)	+	L1MC	LINE/L1	5277	5302	(844)	3482899
1724	17.9	3.0	5.2	chr6	116665919	116666325	(54139654)	+	L1MD	LINE/L1	2426	2823	(3323)	3482901
216	31.4	0.0	8.2	chr6	116680803	116680875	(54125104)	+	L2a	LINE/L2	3322	3388	(38)	3482933
14	22.6	2.4	0.0	chr6	116680890	116680930	(54125049)	+	(GAAT)n	Simple_repeat	1	42	(0)	3482934
37	0.0	0.0	0.0	chr6	116681112	116681145	(54124834)	+	(CCG)n	Simple_repeat	1	34	(0)	3482935
276	32.5	16.4	2.6	chr6	118469405	118469597	(52336382)	+	MamRep137	DNA/TcMar-Tigger	4	228	(282)	3485207
1681	18.5	2.0	3.0	chr6	118469610	118469906	(52336073)	C	AluJb	SINE/Alu	(18)	294	1	3485208
692	24.1	4.4	1.8	chr6	118469915	118470134	(52335845)	+	L1MC5a	LINE/L1	1035	1260	(1517)	3485209
19	9.9	8.3	4.6	chr6	119078776	119078835	(51727144)	+	(CCGCAG)n	Simple_repeat	1	65	(0)	3486086
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
15649	14.2	1.5	1.6	chr6	119412240	119416894	(51389085)	C	L1PB1	LINE/L1	(1502)	5360	646	3486565
18	7.0	0.0	3.1	chr6	121334481	121334521	(49471458)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	3488811
583	32.4	9.2	4.5	chr6	122302714	122303136	(48502843)	+	MamGypLTR1c	LTR/Gypsy	309	753	(50)	3490233
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
15	26.9	2.6	5.0	chr6	123803350	123803427	(47002552)	+	(CGC)n	Simple_repeat	1	80	(0)	3492190
452	27.4	3.3	1.1	chr6	124645600	124645776	(46160203)	+	HAL1	LINE/L1	733	913	(1594)	3493262
508	31.2	5.0	6.6	chr6	124645792	124646093	(46159886)	+	L2a	LINE/L2	3046	3342	(84)	3493263
18	22.1	0.0	0.0	chr6	124961901	124961943	(45844036)	+	(GTGC)n	Simple_repeat	1	43	(0)	3493631
17	23.5	1.2	7.4	chr6	124962503	124962582	(45843397)	+	(CGG)n	Simple_repeat	1	81	(0)	3493632
13	20.8	0.0	0.0	chr6	124962696	124962728	(45843251)	+	(GCGGCT)n	Simple_repeat	1	33	(0)	3493633
1531	19.4	8.2	0.6	chr6	124983793	124984129	(45821850)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3493668
1044	18.1	4.0	0.0	chr6	125107103	125107295	(45698684)	+	MLT1B	LTR/ERVL-MaLR	1	201	(189)	3493863
4794	14.8	1.6	5.0	chr6	125107312	125108283	(45697696)	C	L1M2	LINE/L1	(1576)	5986	5049	3493864
13	11.2	3.2	3.1	chr6	125209884	125209914	(45596065)	+	(TAATT)n	Simple_repeat	1	32	(0)	3494028
2260	9.6	3.5	0.3	chr6	125826916	125827216	(44978763)	+	AluSp	SINE/Alu	1	311	(2)	3494880
1992	20.5	1.3	3.0	chr6	125827217	125827429	(44978550)	C	MSTD	LTR/ERVL-MaLR	(178)	218	1	3494879
16	11.3	4.8	4.5	chr6	128883311	128883352	(41922627)	+	(GCA)n	Simple_repeat	1	44	(0)	3498755
283	23.0	8.1	0.9	chr6	129182049	129182162	(41623817)	+	L1MEd	LINE/L1	4303	4425	(1721)	3499120
1117	27.3	11.6	1.9	chr6	129182228	129182921	(41623058)	+	L1ME3Cz	LINE/L1	226	995	(2)	3499121
394	23.1	8.7	4.5	chr6	129749766	129749934	(41056045)	C	MIR3	SINE/MIR	(8)	200	35	3499887
232	33.9	11.6	0.0	chr6	129886362	129886529	(40919450)	+	L4_B_Mam	LINE/RTE-X	4314	4503	(438)	3500073
814	18.8	8.6	0.0	chr6	129886533	129886681	(40919298)	+	AluJo	SINE/Alu	140	302	(10)	3500074
93	2.0	2.0	1.0	chr6	129886687	129886788	(40919191)	+	(GAAG)n	Simple_repeat	1	104	(0)	3500075
1970	16.3	1.0	0.0	chr6	131634449	131634754	(39171225)	C	AluSx1	SINE/Alu	(2)	310	2	3502636
1784	13.1	0.7	8.2	chr6	131757391	131757718	(39048261)	+	AluSz6	SINE/Alu	1	303	(9)	3502848
12	20.7	0.0	2.9	chr6	132401389	132401423	(38404556)	+	(AGC)n	Simple_repeat	1	35	(0)	3503794
12	15.3	6.4	4.0	chr6	132401470	132401516	(38404463)	+	G-rich	Low_complexity	1	50	(0)	3503795
26	6.1	0.0	0.0	chr6	132401606	132401639	(38404340)	+	(CGTCC)n	Simple_repeat	1	34	(0)	3503796
20	22.9	1.4	5.3	chr6	132401772	132401845	(38404134)	+	GA-rich	Low_complexity	1	75	(0)	3503797
572	19.3	18.9	0.0	chr6	132968484	132968633	(37837346)	+	MER20	DNA/hAT-Charlie	35	219	(0)	3504617
240	8.9	0.0	2.2	chr6	132968690	132968735	(37837244)	C	L1M4	LINE/L1	(986)	5160	5116	3504618
1941	16.3	0.7	0.7	chr6	132968744	132969049	(37836930)	C	AluJb	SINE/Alu	(6)	306	1	3504619
312	27.1	6.8	5.4	chr6	134007086	134007288	(36798691)	+	LTR78	LTR/ERV1	263	468	(836)	3506003
822	29.2	6.1	1.7	chr6	134007344	134007642	(36798337)	+	LTR78	LTR/ERV1	865	1177	(127)	3506003
584	23.1	8.6	2.4	chr6	134007733	134007953	(36798026)	C	MIR	SINE/MIR	(23)	245	2	3506004
234	22.2	1.8	1.8	chr6	134022160	134022214	(36783765)	+	MIR3	SINE/MIR	16	70	(138)	3506031
2007	14.5	0.7	0.3	chr6	134180591	134180887	(36625092)	+	AluJo	SINE/Alu	1	298	(14)	3506332
186	28.3	17.5	2.6	chr6	134180927	134181042	(36624937)	C	MamTip2	DNA/hAT-Tip100	(105)	200	64	3506333
1864	18.0	0.0	3.3	chr6	134346212	134346517	(36459462)	+	AluJr	SINE/Alu	1	296	(16)	3506726
319	23.6	12.8	0.0	chr6	134346556	134346644	(36459335)	C	LTR16C	LTR/ERVL	(0)	489	388	3506727
407	24.4	7.2	5.6	chr6	134346702	134346879	(36459100)	C	LTR16C	LTR/ERVL	(308)	181	1	3506727
444	28.6	3.5	1.2	chr6	135064632	135064797	(35741182)	+	MIR	SINE/MIR	86	255	(7)	3507895
2214	12.6	0.0	0.0	chr6	135188483	135188809	(35617170)	C	AluSx1	SINE/Alu	(0)	312	1	3508098
277	35.2	10.9	6.8	chr6	135188810	135189340	(35616639)	+	L2c	LINE/L2	2760	3328	(59)	3508097
13	10.4	2.9	5.6	chr6	136792031	136792065	(34013914)	+	(CCTCGC)n	Simple_repeat	1	36	(0)	3510465
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
833	21.4	7.9	8.3	chr6	137954212	137954575	(32851404)	C	MLT1D	LTR/ERVL-MaLR	(53)	452	1	3512241
258	30.0	0.0	0.0	chr6	137954581	137954650	(32851329)	C	L1ME3Cz	LINE/L1	(361)	5833	5764	3512244
346	25.4	6.1	11.0	chr6	138603489	138603643	(32202336)	C	L2b	LINE/L2	(6)	3381	3233	3513215
2011	12.5	2.9	0.0	chr6	138630387	138630683	(32175296)	C	AluSp	SINE/Alu	(7)	306	1	3513259
1476	27.6	14.0	3.9	chr6	138956674	138957705	(31848274)	+	HAL1	LINE/L1	769	1921	(586)	3513845
38	15.6	4.1	2.9	chr6	138987868	138987965	(31818014)	+	(CGGCTG)n	Simple_repeat	1	102	(0)	3513898
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
13364	13.8	4.4	4.1	chr6	139863701	139864581	(30941398)	+	Tigger1	DNA/TcMar-Tigger	24	952	(1466)	3515322
4158	23.7	9.2	2.2	chr6	139954020	139955761	(30850218)	C	L1MCa	LINE/L1	(4220)	2531	571	3515454
373	24.4	1.1	0.0	chr6	139955839	139955924	(30850055)	C	L1MCa	LINE/L1	(5481)	564	478	3515454
522	26.8	3.8	2.2	chr6	139955935	139956117	(30849862)	C	L1MCa	LINE/L1	(5859)	186	1	3515454
1293	26.1	10.9	1.2	chr6	139956142	139956572	(30849407)	+	L1ME1	LINE/L1	5698	6175	(4)	3515457
471	31.7	8.8	3.9	chr6	141488304	141488615	(29317364)	C	LTR16C	LTR/ERVL	(1)	488	160	3517327
14	21.4	2.2	2.2	chr6	142301397	142301441	(28504538)	+	(AGTAA)n	Simple_repeat	1	46	(0)	3518335
12	9.3	0.0	4.0	chr6	142301821	142301845	(28504134)	+	(CGC)n	Simple_repeat	1	25	(0)	3518336
365	32.9	12.9	1.3	chr6	142378329	142378485	(28427494)	+	MamTip2	DNA/hAT-Tip100	33	210	(95)	3518438
228	35.0	12.0	2.2	chr6	142378675	142379033	(28426946)	+	L2	LINE/L2	1913	2311	(1108)	3518439
325	31.8	11.7	2.1	chr6	142413775	142413899	(28392080)	C	LTR85a	LTR/Gypsy?	(145)	557	410	3518478
963	27.7	8.2	4.1	chr6	144013483	144013949	(26792030)	C	MLT1D	LTR/ERVL-MaLR	(10)	495	8	3520702
801	23.6	4.7	13.8	chr6	144013973	144014149	(26791830)	+	L1ME2	LINE/L1	4600	4769	(1377)	3520701
378	28.7	2.4	2.4	chr6	144158009	144158133	(26647846)	+	MER5A	DNA/hAT-Charlie	61	185	(4)	3520956
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
14	5.0	0.0	0.0	chr6	144285621	144285641	(26520338)	+	(TCTT)n	Simple_repeat	1	21	(0)	3521176
14	21.2	0.0	7.1	chr6	144320484	144320539	(26485440)	+	(ATTATAA)n	Simple_repeat	1	56	(0)	3521234
2248	13.7	0.0	5.6	chr6	144384199	144384555	(26421424)	+	MER1B	DNA/hAT-Charlie	1	337	(2)	3521348
2356	17.7	7.5	2.4	chr6	144384556	144384917	(26421062)	C	L1MB3	LINE/L1	(161)	6022	5644	3521347
973	27.8	9.9	6.8	chr6	146529244	146529849	(24276130)	+	L1MEh	LINE/L1	482	1108	(1399)	3524147
14	7.8	3.7	0.0	chr6	149059609	149059635	(21746344)	+	(TTTTA)n	Simple_repeat	1	28	(0)	3527859
236	33.1	6.9	3.5	chr6	149088641	149088809	(21717170)	+	L2b	LINE/L2	3146	3320	(55)	3527897
2266	8.2	1.0	0.3	chr6	149721260	149721552	(21084427)	C	AluSp	SINE/Alu	(17)	296	2	3529022
1590	16.2	2.9	2.5	chr6	149721553	149721690	(21084289)	C	AluJo	SINE/Alu	(172)	140	3	3529021
1444	17.6	7.7	17.9	chr6	149721691	149721847	(21084132)	C	L1MC3	LINE/L1	(969)	6816	6667	3529017
17	31.7	2.0	4.0	chr6	149749714	149749812	(21056167)	+	(GCGGCG)n	Simple_repeat	1	101	(0)	3529085
1168	10.9	4.5	0.5	chr6	149991246	149991439	(20814540)	C	LTR19C	LTR/ERV1	(577)	202	1	3529491
2179	7.8	0.7	0.0	chr6	150528406	150528674	(20277305)	+	AluSg	SINE/Alu	32	302	(8)	3530360
11	26.6	5.6	2.7	chr6	150599796	150599812	(20206167)	+	G-rich	Low_complexity	1	29	(46)	3530476
15	14.9	0.0	0.0	chr6	150599813	150599842	(20206137)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3530477
11	26.6	5.6	2.7	chr6	150599843	150599866	(20206113)	+	G-rich	Low_complexity	30	75	(0)	3530476
29	3.2	0.0	0.0	chr6	150599879	150599910	(20206069)	+	(GAGCCC)n	Simple_repeat	1	32	(0)	3530478
249	27.1	12.7	1.0	chr6	150712221	150712317	(20093662)	C	LTR33	LTR/ERVL	(304)	211	102	3530624
235	29.7	3.8	4.7	chr6	150865314	150865419	(19940560)	C	MIRc	SINE/MIR	(80)	188	84	3530871
15	18.5	0.0	6.1	chr6	150865621	150865669	(19940310)	+	(CCGGCCG)n	Simple_repeat	1	49	(0)	3530872
28	0.0	0.0	0.0	chr6	150865722	150865747	(19940232)	+	(CCG)n	Simple_repeat	1	26	(0)	3530873
14	15.2	0.0	7.1	chr6	150865858	150865899	(19940080)	+	(CCGCCC)n	Simple_repeat	1	42	(0)	3530874
21	24.1	3.2	0.0	chr6	150865917	150865979	(19940000)	+	(GCG)n	Simple_repeat	1	65	(0)	3530875
18	8.5	0.0	0.0	chr6	151354151	151354175	(19451804)	+	(A)n	Simple_repeat	1	25	(0)	3531841
2586	6.2	0.3	0.0	chr6	151354364	151354671	(19451308)	C	AluY	SINE/Alu	(2)	309	1	3531842
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
622	13.5	2.6	3.5	chr6	151764107	151764221	(19041758)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	3532589
3809	21.1	6.4	1.9	chr6	153533740	153534738	(17271241)	C	MER21C	LTR/ERVL	(6)	925	3	3535042
392	29.9	2.6	4.5	chr6	153934113	153934266	(16871713)	+	MIRb	SINE/MIR	20	170	(98)	3535575
16446	9.3	2.1	1.1	chr6	153934709	153937352	(16868627)	C	L1PA11	LINE/L1	(0)	6174	3514	3535576
19	8.3	0.0	0.0	chr6	154510937	154510962	(16295017)	+	(A)n	Simple_repeat	1	26	(0)	3536517
32	21.5	5.6	3.0	chr6	154995190	154995314	(15810665)	+	G-rich	Low_complexity	1	132	(0)	3537437
18	0.0	0.0	0.0	chr6	155365639	155365661	(15440318)	+	(TTCA)n	Simple_repeat	1	23	(0)	3538019
13	24.3	3.9	1.9	chr6	156474761	156474812	(14331167)	+	A-rich	Low_complexity	1	54	(0)	3539493
270	31.2	4.4	0.0	chr6	156726535	156726643	(14079336)	C	Charlie15a	DNA/hAT-Charlie	(2)	222	109	3539903
12	32.1	2.8	1.4	chr6	157021871	157021941	(13784038)	+	(CGTCCCG)n	Simple_repeat	1	73	(0)	3540328
13	4.7	0.0	4.2	chr6	157275099	157275122	(13530857)	+	(GGGA)n	Simple_repeat	1	24	(0)	3540654
12	27.6	3.9	0.0	chr6	157275184	157275235	(13530744)	+	(GAGGCGG)n	Simple_repeat	1	54	(0)	3540655
769	26.2	11.9	11.1	chr6	157275258	157275528	(13530451)	C	MLT1C	LTR/ERVL-MaLR	(38)	429	125	3540656
206	31.8	2.2	2.2	chr6	157757294	157757383	(13048596)	C	MIR1_Amn	SINE/MIR	(116)	114	25	3541415
35	14.0	6.7	2.1	chr6	157823035	157823124	(12982855)	+	(CGG)n	Simple_repeat	1	96	(0)	3541541
12	13.7	6.8	4.3	chr6	157823095	157823138	(12982841)	+	(GGCCGAG)n	Simple_repeat	1	47	(0)	3541542
14	21.6	4.7	0.0	chr6	157823308	157823350	(12982629)	+	(GCC)n	Simple_repeat	1	45	(0)	3541543
2150	10.6	2.0	0.3	chr6	157986342	157986634	(12819345)	C	AluSz	SINE/Alu	(14)	298	1	3541777
21	0.0	0.0	0.0	chr6	158167224	158167246	(12638733)	+	(A)n	Simple_repeat	1	23	(0)	3542061
2283	9.0	0.3	0.0	chr6	158167257	158167555	(12638424)	+	AluSx	SINE/Alu	1	300	(12)	3542062
3426	14.1	3.1	0.7	chr6	158194235	158194777	(12611202)	C	LTR6A	LTR/ERV1	(0)	564	9	3542100
1523	16.1	14.6	1.3	chr6	158315162	158315476	(12490503)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	1	3542336
1963	18.7	13.7	2.3	chr6	158315478	158315622	(12490357)	C	L1ME3	LINE/L1	(14)	6148	5998	3542337
2205	17.0	1.6	0.3	chr6	158315623	158315982	(12489997)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3542338
1386	9.7	9.5	16.1	chr6	158367760	158368088	(12437891)	+	AluJb	SINE/Alu	1	305	(7)	3542412
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
14	9.0	5.1	4.9	chr6	158560180	158560218	(12245761)	+	G-rich	Low_complexity	1	41	(0)	3542742
15	18.8	6.2	5.8	chr6	159169709	159169789	(11636190)	+	(CGCTCCG)n	Simple_repeat	1	86	(0)	3543747
727	26.2	7.6	7.9	chr6	159701116	159701393	(11104586)	+	LTR78	LTR/ERV1	871	1147	(157)	3544464
1234	12.1	0.6	0.0	chr6	159701424	159701589	(11104390)	+	AluJr	SINE/Alu	136	302	(10)	3544465
277	28.6	8.2	1.8	chr6	159701590	159701703	(11104276)	+	LTR78	LTR/ERV1	1160	1281	(23)	3544464
411	25.3	11.8	3.2	chr6	159701748	159701902	(11104077)	C	L1M6B	LINE/L1	(189)	180	11	3544466
165	12.6	0.3	5.9	chr6	159898490	159898828	(10907151)	+	(CTC)n	Simple_repeat	1	340	(0)	3544797
182	39.6	0.9	0.0	chr6	159899017	159899127	(10906852)	+	MIRc	SINE/MIR	114	225	(43)	3544798
13	19.9	2.4	2.3	chr6	159969113	159969154	(10836825)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	3544917
17	13.2	0.0	2.9	chr6	159969313	159969347	(10836632)	+	(CTG)n	Simple_repeat	1	35	(0)	3544918
2482	13.1	2.4	0.8	chr6	160520332	160520822	(10285157)	C	LTR12E	LTR/ERV1	(823)	499	1	3545512
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
373	32.5	0.7	1.9	chr6	161588548	161588704	(9217275)	C	L4_A_Mam	LINE/RTE-X	(96)	4894	4740	3546918
711	27.1	4.2	7.0	chr6	164014136	164014476	(6791503)	C	Charlie18a	DNA/hAT-Charlie	(1)	341	11	3550219
2539	13.8	1.9	0.5	chr6	165319288	165319659	(5486320)	+	MER51B	LTR/ERV1	1	377	(0)	3551824
46	0.0	0.0	0.0	chr6	165857699	165857737	(4948242)	+	(GT)n	Simple_repeat	1	39	(0)	3552470
15194	12.4	3.9	1.1	chr6	167351639	167352743	(3453236)	+	Tigger1	DNA/TcMar-Tigger	1	1172	(1246)	3554314
185	34.5	5.4	0.0	chr6	167391854	167391940	(3414039)	+	MIRc	SINE/MIR	20	111	(157)	3554350
929	13.1	4.0	0.0	chr6	169752079	169752223	(1053756)	+	AluSc8	SINE/Alu	136	286	(25)	3556802
12	24.6	1.7	5.1	chr6	170306579	170306584	(499395)	+	(GCCGGC)n	Simple_repeat	1	58	(0)	3557310
14	19.1	3.9	3.8	chr6	170306585	170306635	(499344)	+	(GCGTCC)n	Simple_repeat	1	53	(0)	3557311
13	28.8	0.0	0.0	chr6	170306744	170306824	(499155)	+	(GCGGAG)n	Simple_repeat	1	81	(0)	3557312
13	26.8	2.2	0.0	chr6	170584448	170584492	(221487)	+	(CCCG)n	Simple_repeat	1	46	(0)	3557615
2966	21.6	8.6	2.1	chr7	720358	721364	(158624609)	C	L1MDa	LINE/L1	(3373)	3164	2031	3558798
2901	22.9	8.9	3.4	chr7	1339059	1339693	(158006280)	C	L1MEc	LINE/L1	(5697)	703	45	3559721
420	24.7	8.3	2.9	chr7	1339721	1339891	(158006082)	+	MLT1K	LTR/ERVL-MaLR	381	561	(34)	3559730
225	32.4	1.9	2.8	chr7	1340152	1340259	(158005714)	+	L2a	LINE/L2	2993	3099	(327)	3559731
241	29.5	5.9	7.7	chr7	1505635	1505875	(157840098)	C	L1ME4b	LINE/L1	(71)	821	589	3559984
1834	14.8	2.3	1.4	chr7	1569486	1569782	(157776191)	+	AluJr	SINE/Alu	1	300	(12)	3560095
12	14.3	4.8	4.5	chr7	1569883	1569924	(157776049)	+	(CCTCGG)n	Simple_repeat	1	44	(0)	3560096
1551	19.5	3.7	2.0	chr7	2392276	2392567	(156953406)	+	AluJr	SINE/Alu	1	297	(15)	3561302
21	17.1	5.6	6.4	chr7	6374632	6374720	(152971253)	+	(CGC)n	Simple_repeat	1	94	(0)	3569230
1396	14.2	14.7	1.6	chr7	6375263	6375516	(152970457)	C	AluJr	SINE/Alu	(19)	293	1	3569231
1338	10.4	0.5	9.6	chr7	6482790	6483029	(152862944)	+	AluJb	SINE/Alu	87	304	(8)	3569478
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
2064	31.3	6.1	6.3	chr7	10903749	10905121	(148440852)	C	MLT1I-int	LTR/ERVL-MaLR	(16)	1371	2	3575480
1869	20.1	7.5	0.7	chr7	13044360	13044791	(146301182)	+	MLT1C	LTR/ERVL-MaLR	4	467	(0)	3578213
2720	30.9	8.2	3.3	chr7	17848874	17850023	(141495950)	+	L2a	LINE/L2	2135	3349	(77)	3584430
627	30.7	7.0	6.4	chr7	17961099	17961334	(141384639)	+	L1M5	LINE/L1	4711	4952	(1194)	3584582
1739	16.6	2.2	3.2	chr7	17961335	17961648	(141384325)	+	AluJb	SINE/Alu	2	312	(0)	3584586
32	15.9	7.6	5.0	chr7	18086835	18086903	(141259070)	+	(CCGCG)n	Simple_repeat	1	71	(0)	3584799
32	0.0	0.0	0.0	chr7	18086904	18086933	(141259040)	+	(GCG)n	Simple_repeat	1	30	(0)	3584800
32	15.9	7.6	5.0	chr7	18086934	18086994	(141258979)	+	(CCGCG)n	Simple_repeat	2	64	(0)	3584801
625	26.8	5.8	4.4	chr7	18865088	18865360	(140480613)	C	L2a	LINE/L2	(580)	2839	2563	3585870
16	16.4	4.9	0.0	chr7	19773364	19773371	(139572602)	+	(TTCCTC)n	Simple_repeat	1	21	(22)	3586877
13	16.5	0.0	0.0	chr7	19773372	19773398	(139572575)	+	(CCT)n	Simple_repeat	1	27	(0)	3586878
16	16.4	4.9	0.0	chr7	19773399	19773404	(139572569)	+	(TTCCTC)n	Simple_repeat	22	43	(0)	3586877
2643	5.3	0.0	0.0	chr7	20838861	20839159	(138506814)	C	AluY	SINE/Alu	(12)	299	1	3588356
715	28.8	6.2	9.5	chr7	20839160	20839504	(138506469)	+	MLT1H	LTR/ERVL-MaLR	215	544	(5)	3588355
12	13.0	0.0	9.8	chr7	23471439	23471479	(135874494)	+	G-rich	Low_complexity	1	41	(0)	3592402
20	12.9	8.1	1.5	chr7	23547396	23547416	(135798557)	+	A-rich	Low_complexity	1	22	(0)	3592576
1727	13.3	8.3	0.0	chr7	23547417	23547702	(135798271)	+	AluJo	SINE/Alu	1	312	(0)	3592577
2294	12.2	0.3	0.0	chr7	23617067	23617377	(135728596)	+	AluSz	SINE/Alu	1	312	(0)	3592732
398	26.6	13.0	1.3	chr7	23617443	23617598	(135728375)	C	HAL1	LINE/L1	(1624)	883	707	3592730
528	26.5	8.9	6.1	chr7	23617609	23617805	(135728168)	C	MER21C	LTR/ERVL	(129)	809	607	3592733
323	29.5	0.0	1.3	chr7	24778484	24778562	(134567411)	C	MER81	DNA/hAT-Blackjack	(14)	100	23	3594371
561	36.1	6.3	0.6	chr7	24778581	24778923	(134567050)	C	MLT1J	LTR/ERVL-MaLR	(148)	364	1	3594372
3955	11.4	2.9	2.8	chr7	25196269	25196847	(134149126)	C	LTR19B	LTR/ERV1	(0)	580	1	3595081
492	27.9	2.0	4.4	chr7	25196848	25196904	(134149069)	+	L1MCc	LINE/L1	1710	1767	(5361)	3595079
13	23.8	3.7	2.6	chr7	25196928	25197001	(134148972)	+	A-rich	Low_complexity	1	74	(0)	3595082
2015	11.5	7.3	2.8	chr7	25197055	25197341	(134148632)	C	AluSq2	SINE/Alu	(12)	301	1	3595083
181	29.7	0.0	3.0	chr7	26301646	26301711	(133044262)	C	MIRb	SINE/MIR	(14)	254	191	3596816
1850	13.9	6.8	1.9	chr7	26381667	26382029	(132963944)	C	Tigger3c	DNA/TcMar-Tigger	(0)	602	3	3596958
429	21.5	1.1	1.1	chr7	26687138	26687231	(132658742)	C	MER133A	DNA?	(6)	100	7	3597401
376	23.7	1.0	2.0	chr7	26687144	26687242	(132658731)	+	MER133A	DNA?	7	104	(2)	3597402
1804	13.8	3.8	5.7	chr7	26850298	26850615	(132495358)	+	AluJb	SINE/Alu	1	312	(0)	3597632
13	25.6	1.5	5.9	chr7	27098315	27098381	(132247592)	+	(CTCTC)n	Simple_repeat	1	68	(0)	3598016
2601	21.5	6.5	4.5	chr7	27472893	27473495	(131872478)	C	L1MB7	LINE/L1	(196)	5988	5381	3598552
320	27.8	18.2	0.0	chr7	27721647	27721790	(131624183)	C	MIRb	SINE/MIR	(57)	211	36	3598935
21	3.0	0.0	7.5	chr7	28409184	28409223	(130936750)	+	(GCGGG)n	Simple_repeat	1	40	(0)	3600024
13	24.6	5.1	1.6	chr7	29685300	29685358	(129660615)	+	(GGCGCCC)n	Simple_repeat	1	62	(0)	3601964
12	18.5	0.0	9.6	chr7	30028708	30028759	(129317214)	+	G-rich	Low_complexity	1	52	(0)	3602520
12	12.6	0.0	3.6	chr7	30028809	30028836	(129317137)	+	(GGCCG)n	Simple_repeat	1	28	(0)	3602521
524	24.4	7.5	0.7	chr7	30643842	30643977	(128701996)	C	MER5B	DNA/hAT-Charlie	(0)	178	33	3603419
12	9.4	12.2	3.6	chr7	30644093	30644141	(128701832)	+	(AGTAGAGA)n	Simple_repeat	1	55	(0)	3603420
1357	12.4	0.0	10.2	chr7	30735110	30735383	(128610590)	+	AluJr4	SINE/Alu	65	310	(2)	3603570
321	25.9	22.3	0.0	chr7	30735404	30735577	(128610396)	+	HAL1	LINE/L1	668	891	(1616)	3603571
230	20.5	0.0	0.0	chr7	30735594	30735632	(128610341)	+	Alu	SINE/Alu	1	39	(94)	3603572
396	22.4	0.0	3.0	chr7	30735607	30735710	(128610263)	C	AluJb	SINE/Alu	(96)	205	1	3603573
1223	29.8	8.0	4.2	chr7	30735711	30736336	(128609637)	C	HAL1	LINE/L1	(1852)	655	4	3603569
939	20.7	4.2	0.5	chr7	31778401	31778609	(127567364)	C	MER20	DNA/hAT-Charlie	(1)	218	2	3605196
1750	16.3	15.3	5.3	chr7	32941627	32942100	(126403873)	+	MER34C2	LTR/ERV1	25	554	(1)	3607042
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
2327	7.1	0.0	1.0	chr7	32956669	32956963	(126389010)	C	AluSc	SINE/Alu	(17)	292	1	3607082
16	0.0	0.0	0.0	chr7	32956987	32957003	(126388970)	+	(A)n	Simple_repeat	1	17	(0)	3607083
15	23.3	0.0	0.0	chr7	32957415	32957454	(126388519)	+	(GCGG)n	Simple_repeat	1	40	(0)	3607084
14	22.9	0.0	6.9	chr7	32957516	32957573	(126388400)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3607085
2098	16.2	0.0	0.6	chr7	36497296	36497609	(122848364)	+	AluSz	SINE/Alu	1	312	(0)	3612400
420	30.8	6.1	7.0	chr7	36497610	36497630	(122848343)	C	L1ME4b	LINE/L1	(1027)	5294	5269	3612393
327	26.7	2.6	0.0	chr7	36497688	36497762	(122848211)	+	LTR85b	LTR/Gypsy?	19	95	(689)	3612401
1477	15.8	0.4	5.8	chr7	36498173	36498432	(122847541)	+	AluJo	SINE/Alu	9	254	(58)	3612402
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
208	33.0	4.9	0.0	chr7	38178407	38178503	(121167470)	C	MIRc	SINE/MIR	(82)	186	85	3614740
14	27.0	4.3	2.7	chr7	39951108	39951177	(119394796)	+	(GGC)n	Simple_repeat	1	73	(0)	3617489
22	26.8	1.4	1.4	chr7	39951383	39951455	(119394518)	+	(AGC)n	Simple_repeat	1	74	(0)	3617490
630	25.1	11.7	0.0	chr7	41206835	41207061	(118138912)	C	L1ME3	LINE/L1	(14)	6332	6076	3619511
1630	19.5	5.3	1.1	chr7	41207069	41207468	(118138505)	+	MER88	LTR/ERVL	4	585	(316)	3619512
899	17.6	26.8	0.3	chr7	42887678	42887994	(116457979)	+	MER54B	LTR/ERVL	1	404	(497)	3621806
43	0.0	0.0	0.0	chr7	42887995	42888031	(116457942)	+	(TC)n	Simple_repeat	1	37	(0)	3621807
52	0.0	2.1	0.0	chr7	42888046	42888093	(116457880)	+	(GT)n	Simple_repeat	1	49	(0)	3621808
237	20.6	6.4	5.2	chr7	42888108	42888184	(116457789)	+	MER54B	LTR/ERVL	367	444	(349)	3621806
629	20.1	8.1	8.1	chr7	43152473	43152732	(116193241)	C	HAL1	LINE/L1	(1431)	1076	817	3622188
242	21.8	7.5	9.4	chr7	43152931	43153026	(116192947)	C	HAL1	LINE/L1	(1995)	512	419	3622188
353	28.7	2.7	5.3	chr7	43153392	43153542	(116192431)	C	L1MD	LINE/L1	(1513)	4633	4487	3622189
2075	9.4	1.1	0.0	chr7	43273855	43274120	(116071853)	C	AluSx	SINE/Alu	(13)	299	31	3622389
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
280	25.3	5.6	4.0	chr7	43905786	43905962	(115440011)	C	Charlie18a	DNA/hAT-Charlie	(21)	321	142	3623405
15	23.8	2.0	1.9	chr7	43906341	43906391	(115439582)	+	(CCCCCG)n	Simple_repeat	1	52	(0)	3623406
2414	8.0	0.3	0.0	chr7	44037172	44037470	(115308503)	+	AluSp	SINE/Alu	1	300	(13)	3623718
12	21.9	3.9	3.8	chr7	44796964	44797014	(114548959)	+	(GCG)n	Simple_repeat	1	53	(0)	3624883
4558	23.8	9.5	5.4	chr7	45092116	45093498	(114252475)	+	L1MB8	LINE/L1	154	1610	(5257)	3625467
1227	17.5	3.4	0.5	chr7	45093518	45093717	(114252256)	C	AluJb	SINE/Alu	(22)	290	85	3625472
1383	17.4	3.8	3.1	chr7	45093733	45094099	(114251874)	+	L1MB8	LINE/L1	1622	1996	(4871)	3625467
318	25.9	7.0	2.3	chr7	45436770	45436986	(113908987)	+	L1MEf	LINE/L1	1833	2060	(4140)	3625938
1071	22.4	2.7	2.7	chr7	45437002	45437258	(113908715)	C	MLT1F	LTR/ERVL-MaLR	(7)	541	285	3625940
543	32.1	8.4	0.0	chr7	47266081	47266298	(112079675)	C	MIR	SINE/MIR	(13)	249	12	3628322
277	22.1	0.6	0.0	chr7	47266766	47266836	(112079137)	+	MIRc	SINE/MIR	88	161	(47)	3628323
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
17	28.2	5.2	0.0	chr7	55964833	55964909	(103381064)	+	G-rich	Low_complexity	1	81	(0)	3639596
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
34	0.0	0.0	5.0	chr7	64306899	64306938	(95039035)	+	(TTC)n	Simple_repeat	1	40	(0)	3646128
2300	5.4	2.5	0.0	chr7	64306939	64307216	(95038757)	C	AluSc8	SINE/Alu	(17)	294	10	3646129
35	0.0	0.0	0.0	chr7	64307217	64307249	(95038724)	+	(CGCCCTGC)n	Simple_repeat	1	33	(0)	3646130
2178	14.7	0.6	0.8	chr7	64562251	64562607	(94783366)	+	MER57E3	LTR/ERV1	132	487	(0)	3646433
916	23.2	8.1	0.0	chr7	64563485	64563768	(94782205)	C	MER33	DNA/hAT-Charlie	(15)	309	1	3646434
13	20.4	0.0	2.8	chr7	65509965	65510000	(93835973)	+	(GCG)n	Simple_repeat	1	36	(0)	3647931
185	22.0	3.8	5.7	chr7	65750598	65750650	(93595323)	+	MamRTE1	LINE/RTE-BovB	1637	1688	(2124)	3648385
2212	10.8	0.0	0.0	chr7	66247146	66247423	(93098550)	+	AluSx	SINE/Alu	1	278	(34)	3649614
14	10.3	2.9	2.9	chr7	66247424	66247439	(93098534)	+	(AAC)n	Simple_repeat	3	18	(0)	3649615
249	35.4	2.0	1.0	chr7	66247440	66247539	(93098434)	C	L2a	LINE/L2	(177)	3210	3110	3649612
13	24.4	3.5	3.4	chr7	66628916	66628972	(92717001)	+	(CCGC)n	Simple_repeat	1	59	(0)	3650449
15	20.9	0.0	7.0	chr7	66629333	66629339	(92716634)	+	(CCCCTC)n	Simple_repeat	1	56	(0)	3650450
12	29.9	2.0	0.0	chr7	66629340	66629388	(92716585)	+	(CCCA)n	Simple_repeat	1	50	(0)	3650451
263	28.6	6.7	1.2	chr7	66930483	66930567	(92415406)	C	L2a	LINE/L2	(1337)	2082	1993	3651127
837	19.5	1.3	2.6	chr7	70549546	70549699	(88796274)	+	AluJr4	SINE/Alu	137	288	(24)	3658468
2066	21.0	6.5	2.2	chr7	70846133	70846589	(88499384)	+	HERVIP10F-int	LTR/ERV1	6309	6786	(951)	3658939
36	36.5	1.2	1.2	chr7	70846611	70846781	(88499192)	+	GA-rich	Low_complexity	1	173	(0)	3658940
6469	23.4	4.6	2.4	chr7	70846977	70849655	(88496318)	+	HERVIP10F-int	LTR/ERV1	2608	7737	(0)	3658941
2440	7.3	0.0	0.0	chr7	73322068	73322367	(86023606)	+	AluY	SINE/Alu	1	300	(11)	3664352
14	26.3	1.7	3.4	chr7	74084044	74084122	(85261851)	+	G-rich	Low_complexity	1	77	(0)	3666146
283	31.2	3.4	0.6	chr7	74084398	74084568	(85261405)	+	MIR3	SINE/MIR	19	196	(72)	3666147
269	27.6	6.1	4.7	chr7	75073039	75073167	(84272806)	+	MIR	SINE/MIR	19	149	(113)	3668723
12	27.8	3.1	3.0	chr7	75073438	75073501	(84272472)	+	G-rich	Low_complexity	1	66	(0)	3668724
23	14.7	5.3	5.1	chr7	75073665	75073739	(84272234)	+	(GCCCCA)n	Simple_repeat	1	79	(0)	3668725
1847	9.5	0.0	0.0	chr7	75074130	75074360	(84271613)	C	AluSz	SINE/Alu	(81)	231	1	3668726
1542	12.8	1.8	0.0	chr7	76306807	76307025	(83038948)	C	AluSx1	SINE/Alu	(15)	297	75	3671835
767	16.8	0.0	0.0	chr7	76307026	76307138	(83038835)	+	AluSx3	SINE/Alu	182	294	(17)	3671836
15	24.5	0.0	3.9	chr7	76358446	76358497	(82987476)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	3671937
13	17.6	0.0	2.9	chr7	76358681	76358714	(82987259)	+	GA-rich	Low_complexity	1	34	(0)	3671938
15506	13.7	4.4	0.5	chr7	81901649	81903727	(77442246)	C	L1PB2	LINE/L1	(4455)	2408	291	3680156
13	20.9	3.8	3.6	chr7	88220048	88220100	(71125873)	+	(GCCCT)n	Simple_repeat	1	55	(0)	3688231
20	10.9	7.8	1.8	chr7	90596343	90596393	(68749580)	+	(GGC)n	Simple_repeat	1	55	(0)	3691355
13	9.8	0.0	0.0	chr7	90596516	90596537	(68749436)	+	(GAG)n	Simple_repeat	1	22	(0)	3691356
13	4.9	0.0	4.3	chr7	94509685	94509707	(64836266)	+	(GCC)n	Simple_repeat	1	23	(0)	3696749
13	20.4	0.0	2.8	chr7	94509776	94509811	(64836162)	+	GA-rich	Low_complexity	1	36	(0)	3696750
4634	16.6	3.5	1.2	chr7	97722013	97722887	(61623086)	+	L1MB3	LINE/L1	5275	6166	(17)	3701198
14	25.8	0.0	3.7	chr7	97722898	97722951	(61623022)	+	(AATTAA)n	Simple_repeat	1	54	(0)	3701201
322	32.9	3.1	10.2	chr7	97723302	97723545	(61622428)	+	HAL1b	LINE/L1	2	227	(2194)	3701202
1560	17.6	4.9	0.3	chr7	97972529	97972818	(61373155)	C	AluJb	SINE/Alu	(8)	304	1	3701567
1018	13.9	2.6	0.0	chr7	97972853	97973003	(61372970)	C	AluJr	SINE/Alu	(26)	286	132	3701568
24	0.0	0.0	0.0	chr7	97973007	97973033	(61372940)	+	(AT)n	Simple_repeat	1	27	(0)	3701569
34	4.9	0.0	0.0	chr7	97973033	97973074	(61372899)	+	(AG)n	Simple_repeat	1	42	(0)	3701570
458	18.3	1.5	2.4	chr7	97973075	97973175	(61372798)	C	FLAM_C	SINE/Alu	(15)	118	49	3701571
2549	12.2	6.4	7.6	chr7	97973176	97973663	(61372310)	C	MER51E	LTR/ERV1	(0)	482	1	3701572
2159	10.4	0.0	0.0	chr7	98519754	98520089	(60825884)	C	AluSc	SINE/Alu	(0)	309	1	3702797
2102	12.2	0.0	0.7	chr7	98541609	98541903	(60804070)	+	AluJr	SINE/Alu	10	302	(10)	3702845
37	0.0	0.0	0.0	chr7	98613741	98613772	(60732201)	+	(AC)n	Simple_repeat	1	32	(0)	3702993
330	28.9	2.3	0.0	chr7	99040812	99040939	(60305034)	C	MER45A	DNA/hAT-Tip100	(47)	131	1	3703842
1646	7.6	1.1	14.5	chr7	99438153	99438455	(59907518)	+	AluJr	SINE/Alu	12	273	(39)	3704734
1711	16.1	3.4	0.6	chr7	99685345	99685657	(59660316)	C	MER65A	LTR/ERV1	(86)	359	38	3705192
22	12.8	0.0	0.0	chr7	99685658	99685691	(59660282)	+	(AC)n	Simple_repeat	1	34	(0)	3705193
18079	5.3	0.4	0.6	chr7	99686020	99689554	(59656419)	+	L1PA4	LINE/L1	1	3527	(2619)	3705194
3348	12.2	4.3	2.3	chr7	99990460	99990977	(59354996)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3705611
1049	16.2	16.7	1.2	chr7	100126360	100126512	(59219461)	+	AluJo	SINE/Alu	126	294	(18)	3705907
1668	15.7	0.0	4.7	chr7	100126513	100126811	(59219162)	+	AluJr	SINE/Alu	1	285	(27)	3705910
114	0.8	0.7	4.4	chr7	100131225	100131359	(59214614)	+	(TTTCT)n	Simple_repeat	1	136	(0)	3705918
81	0.0	0.0	0.0	chr7	100694313	100694383	(58651590)	+	(CCG)n	Simple_repeat	1	71	(0)	3707148
14	17.7	6.3	4.5	chr7	100694434	100694496	(58651477)	+	(GCCCCGAC)n	Simple_repeat	1	67	(0)	3707149
45	10.8	0.0	0.0	chr7	100889719	100889788	(58456185)	+	(CCTCC)n	Simple_repeat	1	70	(0)	3707582
13	28.1	0.0	7.6	chr7	101085354	101085432	(58260541)	+	G-rich	Low_complexity	1	79	(0)	3707963
20	21.4	2.8	4.1	chr7	101085609	101085679	(58260294)	+	G-rich	Low_complexity	1	73	(0)	3707964
1841	15.8	4.2	1.6	chr7	101144421	101144724	(58201249)	+	AluJb	SINE/Alu	1	312	(0)	3708095
17	34.2	3.2	2.4	chr7	101162865	101162941	(58183032)	+	G-rich	Low_complexity	1	113	(14)	3708136
18	18.1	2.6	0.0	chr7	101162942	101162979	(58182994)	+	(GC)n	Simple_repeat	1	39	(0)	3708137
18	19.5	0.0	5.7	chr7	101163032	101163084	(58182889)	+	(CTC)n	Simple_repeat	1	53	(0)	3708138
34	18.5	2.2	3.2	chr7	101163297	101163387	(58182586)	+	G-rich	Low_complexity	1	93	(0)	3708139
2359	8.1	0.3	0.0	chr7	101294959	101295254	(58050719)	C	AluSg4	SINE/Alu	(13)	297	1	3708442
1890	10.7	0.0	4.8	chr7	101321173	101321331	(58024642)	+	AluJo	SINE/Alu	134	290	(22)	3708503
875	13.8	0.8	0.0	chr7	101403554	101403676	(57942297)	C	AluJr	SINE/Alu	(188)	124	1	3708723
255	11.9	0.0	0.0	chr7	101403678	101403719	(57942254)	+	MER74B	LTR/ERVL	536	577	(45)	3708724
2053	9.0	0.7	0.0	chr7	101403814	101404080	(57941893)	+	AluSx1	SINE/Alu	1	269	(43)	3708725
3180	20.8	9.9	2.1	chr7	102844629	102845454	(56500519)	C	MER21C	LTR/ERVL	(40)	898	1	3711824
1272	14.7	8.6	11.5	chr7	105358246	105358403	(53987570)	C	Tigger2	DNA/TcMar-Tigger	(59)	2659	2487	3715624
1853	18.9	0.0	0.7	chr7	105358404	105358709	(53987264)	+	AluJb	SINE/Alu	1	304	(8)	3715626
1272	14.7	8.6	11.5	chr7	105358710	105358739	(53987234)	C	Tigger2	DNA/TcMar-Tigger	(232)	2486	2457	3715624
1731	16.3	8.8	4.4	chr7	105358740	105359150	(53986823)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	2	3715627
259	22.9	17.9	2.0	chr7	105389399	105389496	(53956477)	+	MIRc	SINE/MIR	18	134	(134)	3715696
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
1512	25.9	11.8	6.0	chr7	105823937	105824826	(53521147)	+	HAL1	LINE/L1	439	1387	(1120)	3716646
6962	18.2	16.9	2.3	chr7	108579245	108580737	(50765236)	+	MER52A	LTR/ERV1	1	1755	(0)	3720750
22779	9.0	0.9	2.0	chr7	110743470	110749909	(48596064)	+	L1PA7	LINE/L1	2	6469	(0)	3723422
318	27.8	8.0	1.7	chr7	112790794	112790910	(46555063)	+	L2a	LINE/L2	3296	3420	(6)	3726300
10276	5.8	9.9	0.1	chr7	114075984	114077406	(45268567)	C	LTR12C	LTR/ERV1	(0)	1579	2	3727916
587	38.4	1.2	2.5	chr7	115099874	115100309	(44245664)	C	L1MEc	LINE/L1	(5931)	469	40	3729259
301	25.9	0.0	2.4	chr7	116216951	116217033	(43128940)	C	L2a	LINE/L2	(10)	3416	3336	3730746
596	25.5	7.8	3.1	chr7	117304843	117305036	(42040937)	+	LTR79	LTR/ERVL	41	244	(283)	3732369
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
19	4.5	0.0	0.0	chr7	123608971	123608993	(35736980)	+	(A)n	Simple_repeat	1	23	(0)	3740676
324	32.6	8.6	3.7	chr7	123609367	123609554	(35736419)	C	MamTip2	DNA/hAT-Tip100	(107)	198	1	3740677
36	2.7	0.0	0.0	chr7	124032403	124032440	(35313533)	+	(GCT)n	Simple_repeat	1	38	(0)	3741320
29	0.0	0.0	0.0	chr7	127252857	127252883	(32093090)	+	(CGC)n	Simple_repeat	1	27	(0)	3745478
463	29.5	8.0	9.2	chr7	127348259	127348714	(31997259)	+	L1ME4a	LINE/L1	5574	6023	(101)	3745614
334	34.4	3.0	1.5	chr7	128476269	128476398	(30869575)	C	Tigger19b	DNA/TcMar-Tigger	(178)	372	241	3747318
1587	14.5	12.4	0.0	chr7	128761338	128761606	(30584367)	+	7SLRNA	srpRNA	1	307	(13)	3747931
5020	15.2	5.1	7.1	chr7	129156031	129156830	(30189143)	C	L1MC3	LINE/L1	(252)	7533	6756	3748612
1514	12.8	0.0	19.1	chr7	129594822	129595187	(29750786)	C	AluJo	SINE/Alu	(16)	296	1	3749480
3860	17.4	6.2	2.1	chr7	129595188	129595282	(29750691)	C	L1MC3	LINE/L1	(834)	6951	6864	3749479
50	2.0	2.0	0.0	chr7	129595283	129595333	(29750640)	+	(GT)n	Simple_repeat	1	52	(0)	3749481
3860	17.4	6.2	2.1	chr7	129595334	129595383	(29750590)	C	L1MC3	LINE/L1	(922)	6863	6813	3749479
1944	13.8	0.0	3.8	chr7	130364021	130364194	(28981779)	C	AluJb	SINE/Alu	(5)	307	136	3751046
811	19.4	0.0	6.1	chr7	131193769	131193916	(28152057)	C	AluJb	SINE/Alu	(162)	150	12	3752335
259	2.6	0.0	9.3	chr7	131193929	131193971	(28152002)	C	L1MB5	LINE/L1	(0)	6174	6136	3752336
887	14.9	0.0	7.1	chr7	131194007	131194147	(28151826)	C	FLAM_C	SINE/Alu	(10)	133	3	3752337
1251	17.4	5.2	0.8	chr7	131194150	131194387	(28151586)	C	L1MB5	LINE/L1	(34)	6140	5892	3752338
370	22.1	17.5	4.2	chr7	131864310	131864510	(27481463)	C	MIRc	SINE/MIR	(9)	259	16	3753594
1130	27.6	7.4	3.3	chr7	134805115	134805683	(24540290)	C	HAL1	LINE/L1	(1136)	1371	778	3758065
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
493	28.6	5.2	10.0	chr7	135704466	135704836	(23641137)	+	LTR78B	LTR/ERV1	889	1260	(36)	3759440
368	24.6	5.1	3.7	chr7	136851540	136851674	(22494299)	C	LTR16A	LTR/ERVL	(293)	145	9	3761156
325	28.4	12.6	5.5	chr7	136851714	136851933	(22494040)	C	L2a	LINE/L2	(279)	3147	2910	3761155
268	35.0	9.4	4.0	chr7	136851937	136852231	(22493742)	C	L2b	LINE/L2	(3)	3423	3115	3761157
1262	10.4	3.7	2.7	chr7	138413820	138414007	(20931966)	C	MER30B	DNA/hAT-Charlie	(0)	190	1	3763569
1315	18.1	14.8	10.4	chr7	138414008	138414255	(20931718)	C	MLT1C	LTR/ERVL-MaLR	(47)	420	168	3763568
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
13	17.7	4.2	4.0	chr7	139562286	139562333	(19783640)	+	(TGAGA)n	Simple_repeat	1	50	(0)	3765851
1464	11.4	3.9	0.5	chr7	139953908	139954128	(19391845)	+	MER30	DNA/hAT-Charlie	2	230	(0)	3766465
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
2199	11.3	0.7	0.0	chr7	140888558	140888849	(18457124)	+	AluSp	SINE/Alu	4	297	(16)	3768363
685	18.3	6.0	0.0	chr7	140888859	140889000	(18456973)	+	MER20	DNA/hAT-Charlie	2	152	(67)	3768364
5293	13.9	6.2	1.1	chr7	141736646	141737590	(17608383)	+	Tigger3b	DNA/TcMar-Tigger	234	1230	(1)	3769754
431	14.1	6.6	1.0	chr7	141737593	141737692	(17608281)	+	MER96B	DNA/hAT-Tip100	263	368	(49)	3769755
22	19.9	0.0	0.0	chr7	141737767	141737807	(17608166)	+	(T)n	Simple_repeat	1	41	(0)	3769756
1540	14.3	1.3	0.0	chr7	141737809	141738038	(17607935)	C	AluJb	SINE/Alu	(2)	310	78	3769757
18	24.7	1.5	4.3	chr7	148699038	148699105	(10646868)	+	(CGG)n	Simple_repeat	1	69	(0)	3779245
1628	16.8	2.7	3.0	chr7	149149555	149149852	(10196121)	+	AluJr	SINE/Alu	1	297	(15)	3780158
983	15.1	7.9	2.1	chr7	149149853	149149975	(10195998)	C	MER33	DNA/hAT-Charlie	(192)	132	3	3780153
259	33.0	4.6	5.2	chr7	149229202	149229385	(10116588)	C	L2c	LINE/L2	(47)	3340	3131	3780332
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
17312	13.3	2.4	0.4	chr7	149661625	149663693	(9682280)	C	L1PBa	LINE/L1	(4758)	2105	2	3781000
187	29.1	7.2	1.9	chr7	149690746	149690850	(9655123)	+	MER5A	DNA/hAT-Charlie	56	166	(23)	3781035
627	4.1	0.0	0.0	chr7	149691180	149691252	(9654721)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	3781036
887	28.0	14.8	3.0	chr7	149854553	149855044	(9490929)	C	MLT1E2	LTR/ERVL-MaLR	(64)	563	2	3781245
446	22.5	8.6	8.6	chr7	149855046	149855278	(9490695)	+	L1MC4	LINE/L1	7803	8035	(7)	3781244
369	31.1	11.1	0.0	chr7	149855500	149855676	(9490297)	C	LTR78	LTR/ERV1	(436)	868	670	3781246
346	32.9	1.4	1.4	chr7	149855721	149855865	(9490108)	C	LTR78	LTR/ERV1	(715)	589	445	3781246
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
14	15.4	6.7	2.1	chr7	150368946	150368990	(8976983)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	3781959
21	14.1	0.0	0.0	chr7	151059515	151059553	(8286420)	+	(CGCCCC)n	Simple_repeat	1	39	(0)	3782839
302	16.9	4.9	1.3	chr7	151303301	151303378	(8042595)	+	L1MC5	LINE/L1	9057	9137	(167)	3783205
13	18.4	4.2	8.0	chr7	151303539	151303610	(8042363)	+	(GGCTG)n	Simple_repeat	1	75	(0)	3783206
856	10.6	2.2	20.0	chr7	151340963	151341187	(8004786)	C	Tigger7	DNA/TcMar-Tigger	(0)	2491	2308	3783280
1716	18.0	3.5	0.0	chr7	151464633	151464937	(7881036)	C	7SLRNA	srpRNA	(3)	317	2	3783490
2124	12.4	1.9	0.7	chr7	151464976	151465282	(7880691)	+	AluSp	SINE/Alu	2	312	(1)	3783491
1272	19.7	7.8	8.2	chr7	151607854	151608313	(7737660)	+	MLT1C	LTR/ERVL-MaLR	1	473	(32)	3783745
15	23.4	3.9	5.0	chr7	151631866	151631942	(7714031)	+	(CCCCGGA)n	Simple_repeat	1	80	(0)	3783798
13	18.8	0.0	5.0	chr7	151632021	151632060	(7713913)	+	(GGCCG)n	Simple_repeat	1	40	(0)	3783799
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
2353	12.2	0.0	0.0	chr7	151716965	151717275	(7628698)	+	AluSz	SINE/Alu	1	311	(1)	3783937
10030	9.3	10.7	1.6	chr7	151972008	151973174	(7372799)	+	THE1D-int	LTR/ERVL-MaLR	1	1321	(310)	3784346
259	20.0	1.5	1.5	chr7	152025107	152025172	(7320801)	C	L1M	LINE/L1	(2456)	5426	5361	3784460
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
23	12.4	3.5	5.0	chr7	152025935	152025992	(7319981)	+	(GCG)n	Simple_repeat	1	60	(0)	3784463
1583	21.1	0.3	1.7	chr7	152395190	152395488	(6950485)	C	AluJb	SINE/Alu	(17)	295	1	3785022
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
31	0.0	0.0	0.0	chr7	155231575	155231603	(4114370)	+	(CCATGC)n	Simple_repeat	1	29	(0)	3789387
273	35.3	9.1	1.2	chr7	155231609	155231780	(4114193)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	3789388
57	12.4	3.1	0.0	chr7	155509462	155509558	(3836415)	+	GA-rich	Low_complexity	1	100	(0)	3789721
1251	23.9	7.0	6.3	chr7	155659740	155660082	(3685891)	C	MLT1C	LTR/ERVL-MaLR	(29)	438	89	3789960
1106	15.9	6.2	0.4	chr7	156659677	156659903	(2686070)	C	LTR31	LTR/ERV1	(374)	245	5	3791191
17	20.6	1.6	4.8	chr7	157290242	157290302	(2055671)	+	G-rich	Low_complexity	1	62	(0)	3792206
4754	9.3	20.2	0.4	chr7	158099941	158100244	(1245729)	C	L1PB1	LINE/L1	(2)	6149	5782	3792994
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
17	10.7	0.0	3.1	chr8	738983	739014	(144399622)	+	(GCC)n	Simple_repeat	1	32	(0)	3795130
1107	29.1	11.3	4.0	chr8	1978766	1979014	(143159622)	C	MLT1G1-int	LTR/ERVL-MaLR	(1)	1488	1196	3796288
1580	18.0	9.9	11.6	chr8	1979015	1979347	(143159289)	C	MLT2D	LTR/ERVL	(1)	413	88	3796290
356	23.4	11.9	0.0	chr8	11135982	11136122	(134002514)	+	MER104	DNA/TcMar-Tc2	3	162	(19)	3809139
1190	24.2	6.2	3.0	chr8	11136195	11136232	(134002404)	+	MLT1A	LTR/ERVL-MaLR	1	38	(336)	3809140
2264	9.3	3.6	0.0	chr8	11136233	11136522	(134002114)	+	AluSp	SINE/Alu	1	301	(12)	3809141
21	14.0	4.3	0.0	chr8	11955970	11956016	(133182620)	+	G-rich	Low_complexity	1	49	(0)	3810445
12	25.3	5.8	0.0	chr8	15236892	15236943	(129901693)	+	(CCCGCGT)n	Simple_repeat	1	55	(0)	3815071
205	31.8	10.5	1.7	chr8	17366048	17366220	(127772416)	+	L2	LINE/L2	1459	1648	(1771)	3818083
37	9.6	2.9	1.4	chr8	17499322	17499391	(127639245)	+	(TC)n	Simple_repeat	1	72	(0)	3818286
1791	15.8	0.3	3.5	chr8	22088716	22089025	(123049611)	+	AluJr	SINE/Alu	13	312	(0)	3825567
14	31.7	1.6	0.0	chr8	22109394	22109455	(123029181)	+	(GCGGAA)n	Simple_repeat	1	63	(0)	3825592
14	22.0	2.0	3.9	chr8	22367197	22367247	(122771389)	+	G-rich	Low_complexity	1	52	(0)	3826083
60	14.1	3.2	2.3	chr8	22693321	22693446	(122445190)	+	(CCG)n	Simple_repeat	1	130	(0)	3826651
20	15.0	3.6	6.1	chr8	22693671	22693727	(122444909)	+	GA-rich	Low_complexity	1	55	(0)	3826652
10184	5.9	11.3	1.2	chr8	23069937	23071352	(122067284)	C	LTR12C	LTR/ERV1	(0)	1579	3	3827298
13	12.0	5.0	4.8	chr8	23403695	23403734	(121734902)	+	(GCGCC)n	Simple_repeat	1	42	(0)	3827851
217	23.7	2.6	12.6	chr8	23404448	23404534	(121734102)	+	L2c	LINE/L2	3305	3382	(5)	3827852
1932	23.6	4.8	1.0	chr8	23518446	23519015	(121619621)	C	L1ME3A	LINE/L1	(16)	6157	5555	3828075
1788	16.7	0.0	1.8	chr8	26336153	26336434	(118802202)	+	AluJr	SINE/Alu	12	288	(24)	3832568
237	32.0	15.2	0.0	chr8	27705501	27705600	(117433036)	+	MIRb	SINE/MIR	35	152	(116)	3834835
591	35.0	6.1	10.2	chr8	27705621	27706120	(117432516)	C	L2c	LINE/L2	(0)	3387	2910	3834836
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
31	3.1	0.0	0.0	chr8	30384617	30384649	(114753987)	+	(CTC)n	Simple_repeat	1	33	(0)	3839684
27	0.0	3.5	0.0	chr8	30384746	30384774	(114753862)	+	(CTTC)n	Simple_repeat	1	30	(0)	3839685
13	15.9	5.7	0.0	chr8	30385041	30385075	(114753561)	+	(GCCCA)n	Simple_repeat	1	37	(0)	3839686
267	30.1	2.8	0.0	chr8	37360024	37360126	(107778510)	+	MIR3	SINE/MIR	48	153	(55)	3850196
275	30.4	8.1	4.7	chr8	37677997	37678186	(107460450)	+	L2c	LINE/L2	3182	3378	(9)	3850766
1875	19.3	0.0	0.0	chr8	37678206	37678510	(107460126)	+	AluJb	SINE/Alu	7	311	(1)	3850767
264	24.1	1.2	9.8	chr8	38104839	38104930	(107033706)	+	L2	LINE/L2	2317	2400	(1019)	3851655
646	22.1	3.9	0.0	chr8	38230926	38231097	(106907539)	C	AluJr	SINE/Alu	(14)	298	120	3851936
1063	22.9	10.7	2.6	chr8	38721059	38721292	(106417344)	C	MER46C	DNA/TcMar-Tigger	(80)	258	2	3852824
421	32.6	3.9	0.0	chr8	38721301	38721447	(106417189)	C	MIRb	SINE/MIR	(114)	154	2	3852826
2189	9.2	0.0	1.1	chr8	42805699	42806011	(102332625)	C	AluSz	SINE/Alu	(0)	312	1	3859533
1745	27.3	6.0	1.5	chr8	42806012	42806348	(102332288)	C	L1ME3C	LINE/L1	(5)	6118	5757	3859534
25	28.2	0.0	0.0	chr8	52384456	52384523	(92754113)	+	(CA)n	Simple_repeat	1	68	(0)	3868076
402	18.4	19.1	0.7	chr8	52587423	52587575	(92551061)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	3868350
1058	16.1	0.0	0.0	chr8	52587761	52587915	(92550721)	C	AluJo	SINE/Alu	(8)	304	150	3868351
548	11.3	0.9	15.2	chr8	52706362	52706486	(92432150)	C	AluSx	SINE/Alu	(15)	297	191	3868521
2268	4.9	0.0	1.5	chr8	52706487	52706751	(92431885)	+	AluY	SINE/Alu	37	297	(14)	3868522
182	29.0	7.5	0.0	chr8	53843645	53843706	(91294930)	C	MIRb	SINE/MIR	(88)	180	114	3870001
467	28.3	10.7	2.1	chr8	55772631	55772818	(89365818)	C	MIRb	SINE/MIR	(61)	207	2	3872867
349	34.3	7.0	1.7	chr8	56787094	56787268	(88351368)	C	MIRb	SINE/MIR	(34)	234	50	3874437
1299	17.1	0.8	3.7	chr8	56787751	56788023	(88350613)	+	L1MA10	LINE/L1	6070	6334	(0)	3874438
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
186	27.8	12.6	4.9	chr8	57742135	57742338	(87396298)	C	L2	LINE/L2	(820)	2599	2378	3875682
1107	21.1	8.8	10.7	chr8	57742347	57742739	(87395897)	C	MLT1B	LTR/ERVL-MaLR	(4)	386	2	3875683
40	0.0	0.0	0.0	chr8	58553556	58553592	(86585044)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	3876759
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
48	2.1	0.0	0.0	chr8	60678765	60678812	(84459824)	+	(GCG)n	Simple_repeat	1	48	(0)	3879590
18	18.4	0.0	0.0	chr8	60679102	60679138	(84459498)	+	(CGG)n	Simple_repeat	1	37	(0)	3879591
22	13.1	0.0	2.3	chr8	60679205	60679248	(84459388)	+	G-rich	Low_complexity	1	44	(0)	3879592
11	21.7	7.3	1.7	chr8	60679281	60679335	(84459301)	+	(CCGGCGC)n	Simple_repeat	1	59	(0)	3879593
13	20.9	2.4	2.4	chr8	60679348	60679388	(84459248)	+	(GCG)n	Simple_repeat	1	42	(0)	3879594
1763	16.8	6.1	0.0	chr8	61706142	61706432	(83432204)	+	AluJb	SINE/Alu	1	310	(2)	3880989
49	2.7	3.5	5.6	chr8	61706433	61706518	(83432118)	+	(GAA)n	Simple_repeat	1	89	(0)	3880990
863	23.8	4.5	0.9	chr8	61759746	61759978	(83378658)	C	LTR16E1	LTR/ERVL	(1)	537	296	3881082
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
12	5.6	0.0	0.0	chr8	63168758	63168776	(81969860)	+	(CGG)n	Simple_repeat	1	19	(0)	3882839
14	5.0	0.0	0.0	chr8	63168838	63168858	(81969778)	+	(GGC)n	Simple_repeat	1	21	(0)	3882840
1075	22.8	7.0	2.7	chr8	63295325	63295570	(81843066)	+	MER45C	DNA/hAT-Tip100	694	953	(0)	3883053
201	38.8	5.0	2.5	chr8	63295597	63295792	(81842844)	+	L2c	LINE/L2	1335	1535	(1884)	3883055
543	0.0	0.0	21.5	chr8	66113367	66113459	(79025177)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886877
563	0.0	0.0	18.0	chr8	66113988	66114076	(79024560)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886878
588	6.8	0.0	0.0	chr8	66114189	66114261	(79024375)	+	tRNA-Ala-GCY	tRNA	1	73	(3)	3886879
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
17	19.9	2.1	2.0	chr8	66177289	66177336	(78961300)	+	(CGGCTG)n	Simple_repeat	1	49	(0)	3886968
23	17.5	0.0	0.0	chr8	66666906	66666950	(78471686)	+	(GGC)n	Simple_repeat	1	45	(0)	3887825
254	35.5	6.8	3.1	chr8	67028312	67028439	(78110197)	+	MER5A	DNA/hAT-Charlie	54	186	(3)	3888571
15	4.7	0.0	0.0	chr8	67029054	67029075	(78109561)	+	(TAA)n	Simple_repeat	1	22	(0)	3888572
402	33.3	6.4	8.5	chr8	67029119	67029436	(78109200)	+	L2c	LINE/L2	3075	3385	(2)	3888573
514	31.0	2.2	10.0	chr8	70000238	70000461	(75138175)	C	Chap1_Mam	DNA/hAT-Charlie	(36)	306	92	3893041
1896	15.9	0.3	0.7	chr8	70000462	70000751	(75137885)	C	AluJb	SINE/Alu	(21)	291	3	3893042
1631	21.4	22.1	1.6	chr8	70088264	70088871	(75049765)	C	LTR41	LTR/ERVL	(0)	768	1	3893264
15	13.2	0.0	5.4	chr8	70671018	70671054	(74467582)	+	(CTTA)n	Simple_repeat	1	37	(0)	3894223
817	17.2	1.4	6.0	chr8	70671055	70671205	(74467431)	C	AluJr4	SINE/Alu	(33)	279	136	3894224
818	11.1	2.9	1.5	chr8	70671206	70671300	(74467336)	C	L1MA4A	LINE/L1	(353)	5950	5820	3894225
600	29.0	8.1	1.5	chr8	73224498	73224693	(71913943)	+	MIRb	SINE/MIR	1	210	(58)	3897653
1166	24.6	7.5	4.4	chr8	73224699	73225149	(71913487)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	3897654
4854	17.6	1.6	2.1	chr8	73336210	73337142	(71801494)	+	L1MB7	LINE/L1	5255	6182	(2)	3897803
2114	9.3	0.4	0.0	chr8	73660171	73660429	(71478207)	+	AluSg	SINE/Alu	22	281	(29)	3898297
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
186	25.0	5.1	3.5	chr8	78516730	78516787	(66621849)	+	OldhAT1	DNA/hAT-Ac	2483	2541	(307)	3904792
2719	15.5	11.2	7.3	chr8	79783453	79783519	(65355117)	+	L1MB8	LINE/L1	6118	6178	(0)	3906507
669	27.2	4.5	4.9	chr8	80240235	80240478	(64898158)	+	MamTip3	DNA/hAT-Tip100	58	300	(200)	3907311
349	21.9	6.8	2.4	chr8	80489149	80489232	(64649404)	+	MIRc	SINE/MIR	15	102	(166)	3907905
316	26.8	4.5	5.9	chr8	80489278	80489401	(64649235)	C	MIRb	SINE/MIR	(85)	183	59	3907906
44	31.5	1.7	1.1	chr8	80873607	80873781	(64264855)	+	(CTC)n	Simple_repeat	1	178	(0)	3908487
221	31.5	1.1	1.1	chr8	85245228	85245317	(59893319)	+	MIRb	SINE/MIR	167	256	(12)	3914277
12	23.1	0.0	4.5	chr8	85463509	85463552	(59675084)	+	G-rich	Low_complexity	1	44	(0)	3914607
35	0.0	0.0	0.0	chr8	85463770	85463802	(59674834)	+	(GGAGCCCC)n	Simple_repeat	1	33	(0)	3914608
14	15.9	7.1	0.0	chr8	85463829	85463870	(59674766)	+	(CCCCG)n	Simple_repeat	1	45	(0)	3914609
37	0.0	0.0	0.0	chr8	85464147	85464180	(59674456)	+	(CCCCGAT)n	Simple_repeat	1	34	(0)	3914610
298	29.0	3.1	1.6	chr8	85659943	85660068	(59478568)	C	L1ME4b	LINE/L1	(0)	892	765	3914925
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
1662	13.7	4.4	4.7	chr8	86513855	86514153	(58624483)	C	AluJo	SINE/Alu	(14)	298	1	3916200
13	10.8	6.5	0.0	chr8	86514397	86514427	(58624209)	+	(CCCGCC)n	Simple_repeat	1	33	(0)	3916201
1063	25.0	13.8	0.3	chr8	90986097	90986421	(54152215)	+	Arthur1	DNA/hAT-Tip100	319	694	(3253)	3921893
16	10.5	3.2	0.0	chr8	92103158	92103188	(53035448)	+	(CTCC)n	Simple_repeat	1	32	(0)	3923413
17	21.4	3.9	5.0	chr8	92103352	92103428	(53035208)	+	(GCGCCGC)n	Simple_repeat	1	80	(0)	3923414
12	9.8	0.0	0.0	chr8	92103580	92103601	(53035035)	+	(GGGC)n	Simple_repeat	1	22	(0)	3923415
55	13.5	3.7	0.9	chr8	95786775	95786883	(49351753)	+	GA-rich	Low_complexity	1	113	(0)	3929298
474	16.5	6.4	0.0	chr8	97912867	97912969	(47225667)	C	LTR67B	LTR/ERVL	(9)	611	502	3932719
516	29.4	14.7	4.8	chr8	97913003	97913295	(47225341)	C	LTR67B	LTR/ERVL	(276)	344	18	3932719
365	19.8	3.0	13.5	chr8	98345543	98345653	(46792983)	+	L1MC1	LINE/L1	475	573	(5827)	3933547
5595	17.7	9.1	4.5	chr8	98345640	98346002	(46792634)	+	L1MC1	LINE/L1	829	1203	(5197)	3933547
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
12	16.1	5.7	0.0	chr8	100158300	100158334	(44980302)	+	G-rich	Low_complexity	1	37	(0)	3936264
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
271	30.4	8.0	3.4	chr8	100847811	100847929	(44290707)	+	L2c	LINE/L2	3254	3378	(9)	3937648
1984	17.0	3.3	4.1	chr8	100860719	100860775	(44277861)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	335	3937663
1915	13.0	9.1	0.0	chr8	100860776	100861083	(44277553)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3937664
14	18.0	2.5	2.4	chr8	100952688	100952727	(44185909)	+	(GCGCGG)n	Simple_repeat	1	41	(0)	3937836
265	29.1	7.8	0.0	chr8	101127413	101127508	(44011128)	+	MIRb	SINE/MIR	20	123	(107)	3938203
22	27.2	1.0	5.7	chr8	101205283	101205386	(43933250)	+	(CCCGCCC)n	Simple_repeat	1	105	(0)	3938341
12	21.7	1.6	7.9	chr8	101205648	101205709	(43932927)	+	(CGCCT)n	Simple_repeat	1	63	(0)	3938342
12	19.3	0.0	10.3	chr8	102239559	102239616	(42899020)	+	(CCTCC)n	Simple_repeat	1	58	(0)	3940006
13	18.1	0.0	7.0	chr8	102806671	102806713	(42331923)	+	G-rich	Low_complexity	1	43	(0)	3941146
36	2.7	0.0	0.0	chr8	103140446	103140483	(41998153)	+	(GGAT)n	Simple_repeat	1	38	(0)	3941813
377	23.0	9.2	0.6	chr8	103185351	103185529	(41953107)	C	L1MEd	LINE/L1	(5023)	2063	1868	3941891
344	30.1	10.1	8.9	chr8	104436152	104436327	(40702309)	+	HAL1	LINE/L1	798	956	(1509)	3943705
2202	10.7	3.3	0.0	chr8	104436328	104436617	(40702019)	+	AluSx1	SINE/Alu	1	300	(12)	3943706
800	19.6	0.0	0.0	chr8	116690413	116690545	(28448091)	+	FLAM_C	SINE/Alu	1	133	(10)	3960440
11	24.1	0.0	0.0	chr8	116782350	116782383	(28356253)	+	(TTTTTC)n	Simple_repeat	1	34	(0)	3960592
851	17.2	1.1	4.8	chr8	116782391	116782491	(28356145)	C	MLT1C	LTR/ERVL-MaLR	(285)	182	90	3960590
2360	9.4	0.7	0.3	chr8	116782492	116782800	(28355836)	C	AluSx1	SINE/Alu	(2)	310	1	3960593
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
856	25.5	21.1	10.8	chr8	123377421	123377992	(21760644)	C	Charlie29a	DNA/hAT-Charlie	(0)	719	91	3971728
2254	11.6	0.3	0.7	chr8	124295973	124296273	(20842363)	+	AluSx3	SINE/Alu	1	300	(11)	3973473
3990	22.7	7.0	5.6	chr8	124296274	124298388	(20840248)	C	L1ME1	LINE/L1	(128)	7359	5196	3973472
667	30.8	6.5	1.5	chr8	124946309	124946512	(20192124)	+	L1M4b	LINE/L1	308	522	(6345)	3974656
5202	16.0	4.6	3.9	chr8	124946511	124947656	(20190980)	+	L1M4b	LINE/L1	1503	2656	(4211)	3974656
13	20.5	5.8	1.8	chr8	127735917	127735968	(17402668)	+	(TCCCC)n	Simple_repeat	1	55	(0)	3979957
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
13	13.1	0.0	0.0	chr8	130016424	130016448	(15122188)	+	(GCC)n	Simple_repeat	1	25	(0)	3984185
20	10.1	0.0	0.0	chr8	130016501	130016532	(15122104)	+	(GCA)n	Simple_repeat	1	32	(0)	3984186
478	25.4	3.6	2.6	chr8	130527903	130528087	(14610549)	C	MLT1K	LTR/ERVL-MaLR	(355)	187	11	3985267
684	18.4	0.0	1.6	chr8	140937797	140937938	(4200698)	+	FLAM_C	SINE/Alu	9	218	(84)	4002831
2316	9.5	0.0	0.3	chr8	141119975	141120269	(4018367)	C	AluSx1	SINE/Alu	(17)	295	2	4003218
16	28.8	0.0	0.0	chr8	141128444	141128494	(4010142)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4003235
554	20.6	16.4	0.5	chr8	143281228	143281417	(1857219)	C	LTR50	LTR/ERVL	(6)	789	564	4006009
340	26.3	5.0	8.3	chr8	143281609	143281836	(1856800)	C	LTR50	LTR/ERVL	(509)	286	67	4006009
14	21.1	2.6	0.0	chr8	143331880	143331918	(1806718)	+	(GGCGG)n	Simple_repeat	1	40	(0)	4006079
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1855	14.0	0.3	2.3	chr8	143760400	143760699	(1377937)	+	AluJb	SINE/Alu	7	300	(12)	4006625
12	27.3	0.0	3.9	chr8	143761136	143761187	(1377449)	+	(GCCGGA)n	Simple_repeat	1	52	(0)	4006626
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
7746	18.2	1.7	3.5	chr8	145026350	145027823	(110813)	C	HERVK-int	LTR/ERVK	(6090)	1446	1	4008436
3045	17.6	7.2	4.6	chr9	721069	722001	(137672716)	+	LTR49-int	LTR/ERV1	5043	6257	(6)	4009626
525	31.7	1.7	2.7	chr9	804187	804478	(137590239)	+	L2a	LINE/L2	2910	3198	(228)	4009761
290	36.1	6.2	0.0	chr9	996209	996388	(137398329)	+	MER91A	DNA/hAT-Tip100	4	195	(1)	4010097
226	22.9	11.9	4.1	chr9	1960181	1960303	(136434414)	+	LTR88b	LTR/Gypsy?	293	426	(411)	4011478
310	30.1	1.5	8.3	chr9	1960524	1960668	(136434049)	+	LTR88b	LTR/Gypsy?	642	776	(61)	4011478
765	28.3	3.9	0.0	chr9	2478340	2478537	(135916180)	+	MLT1G1	LTR/ERVL-MaLR	3	208	(371)	4012164
675	24.6	0.0	0.0	chr9	2478546	2478667	(135916050)	+	FLAM_A	SINE/Alu	2	123	(19)	4012165
1904	14.6	2.6	0.7	chr9	2478674	2478974	(135915743)	+	AluSx	SINE/Alu	1	307	(5)	4012166
1164	26.3	7.4	0.6	chr9	2478985	2479313	(135915404)	+	MLT1G1	LTR/ERVL-MaLR	212	564	(15)	4012164
1899	18.2	4.6	2.9	chr9	2867319	2867726	(135526991)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	51	4012779
464	27.9	4.2	5.1	chr9	3601827	3602006	(134792711)	C	MIRc	SINE/MIR	(87)	175	2	4013850
15	8.1	0.0	3.6	chr9	4298042	4298069	(134096648)	+	(GCGA)n	Simple_repeat	1	28	(0)	4014804
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
2068	15.4	0.0	1.6	chr9	7138533	7138838	(131255879)	+	AluJr4	SINE/Alu	1	301	(11)	4019293
194	32.4	2.9	8.9	chr9	14273767	14273878	(124120839)	C	L2	LINE/L2	(2855)	564	460	4028744
408	32.0	15.4	2.4	chr9	14543343	14543550	(123851167)	C	MIRb	SINE/MIR	(0)	268	29	4029143
2749	12.3	3.5	0.2	chr9	15610924	15611337	(122783380)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4030847
448	25.6	2.6	3.8	chr9	15611338	15611431	(122783286)	C	HAL1	LINE/L1	(1638)	869	781	4030844
725	32.5	7.5	6.2	chr9	15611550	15611841	(122782876)	C	HAL1	LINE/L1	(1917)	590	295	4030844
493	24.6	4.8	0.0	chr9	17963174	17963311	(120431406)	C	L1ME2z	LINE/L1	(12)	6432	6288	4034040
337	26.6	17.7	2.3	chr9	18805478	18805696	(119589021)	C	MIRb	SINE/MIR	(8)	260	1	4035157
2181	8.1	0.0	6.2	chr9	19380563	19380869	(119013848)	+	AluSx1	SINE/Alu	1	288	(24)	4036215
265	26.4	18.4	2.1	chr9	19557001	19557164	(118837553)	C	MIR3	SINE/MIR	(15)	193	7	4036533
32	22.9	2.1	2.1	chr9	21559832	21559926	(116834791)	+	(GCC)n	Simple_repeat	1	97	(0)	4039359
2036	17.2	6.8	2.2	chr9	27089205	27089666	(111305051)	C	L1MC3	LINE/L1	(1519)	6266	5782	4046633
804	25.8	11.8	3.2	chr9	27089683	27090090	(111304627)	C	HAL1	LINE/L1	(1476)	1031	584	4046634
307	18.8	0.0	0.0	chr9	27090181	27090249	(111304468)	C	L1MB8	LINE/L1	(0)	6178	6110	4046635
427	27.0	6.8	6.2	chr9	32550395	32550556	(105844161)	C	MIRb	SINE/MIR	(103)	165	3	4053835
11	22.1	5.4	3.4	chr9	33676731	33676786	(104717931)	+	(TGGCTC)n	Simple_repeat	1	59	(0)	4055806
30	0.0	0.0	0.0	chr9	33677010	33677037	(104717680)	+	(GCC)n	Simple_repeat	1	28	(0)	4055807
15	12.0	0.0	0.0	chr9	33677312	33677338	(104717379)	+	(CGC)n	Simple_repeat	1	27	(0)	4055808
15	0.0	0.0	0.0	chr9	33677386	33677404	(104717313)	+	(GCC)n	Simple_repeat	1	19	(0)	4055809
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
28	2.9	2.9	0.0	chr9	33817125	33817159	(104577558)	+	(CCCT)n	Simple_repeat	1	36	(0)	4056031
13	25.3	6.0	1.4	chr9	33817376	33817399	(104577318)	+	(CCCCCT)n	Simple_repeat	1	69	(0)	4056032
13	20.4	2.4	2.4	chr9	33817400	33817440	(104577277)	+	(CCT)n	Simple_repeat	1	42	(0)	4056033
21	3.7	0.0	0.0	chr9	33817729	33817756	(104576961)	+	(CCG)n	Simple_repeat	1	28	(0)	4056034
416	29.5	0.0	1.8	chr9	35658839	35658952	(102735765)	+	MIRc	SINE/MIR	125	236	(32)	4059252
440	23.2	2.9	2.9	chr9	36190486	36190587	(102204130)	C	MIRc	SINE/MIR	(69)	199	98	4060131
2552	6.9	0.3	0.0	chr9	36247745	36248049	(102146668)	+	AluSp	SINE/Alu	1	306	(7)	4060235
2259	9.8	0.0	3.0	chr9	36248319	36248623	(102146094)	C	AluSq	SINE/Alu	(17)	296	1	4060236
2442	8.3	0.7	0.0	chr9	36305035	36305335	(102089382)	C	AluSx1	SINE/Alu	(9)	303	1	4060376
766	14.4	4.4	9.9	chr9	36450062	36450253	(101944464)	C	L1MB4	LINE/L1	(0)	6180	6000	4060667
565	25.8	4.8	1.9	chr9	38054973	38055134	(100339583)	C	MER5B	DNA/hAT-Charlie	(1)	177	11	4063851
549	21.1	11.7	5.1	chr9	38065404	38065578	(100329139)	+	MER5A	DNA/hAT-Charlie	2	189	(0)	4063868
888	24.0	5.4	0.4	chr9	41041884	41042146	(97352571)	+	HAL1	LINE/L1	724	1000	(1507)	4068102
3538	18.6	2.8	1.8	chr9	41042150	41042861	(97351856)	+	L1ME1	LINE/L1	5460	6178	(1)	4068090
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
14	17.1	11.9	0.0	chr9	68705180	68705238	(69689479)	+	(GGCAGCC)n	Simple_repeat	1	66	(0)	4080300
51	25.2	3.4	3.8	chr9	69325390	69325595	(69069122)	+	(CGC)n	Simple_repeat	1	213	(0)	4081448
302	21.4	2.3	1.1	chr9	69470873	69470967	(68923750)	C	Zaphod2	DNA/hAT-Tip100	(96)	100	3	4081646
844	22.1	5.2	0.0	chr9	69470998	69471214	(68923503)	+	MIR	SINE/MIR	34	262	(0)	4081647
14	22.6	5.1	4.8	chr9	71910514	71910592	(66484125)	+	(CGCTCCC)n	Simple_repeat	1	83	(0)	4085497
16	20.0	2.5	0.0	chr9	71910975	71911014	(66483703)	+	(CCG)n	Simple_repeat	1	41	(0)	4085498
8032	3.5	1.2	22.6	chr9	72805533	72807284	(65587433)	C	SVA_D	Retroposon/SVA	(0)	1386	15	4087197
2182	14.0	0.3	0.0	chr9	74566515	74566822	(63827895)	+	AluSx	SINE/Alu	1	309	(3)	4089578
2174	11.9	0.7	0.3	chr9	74567033	74567326	(63827391)	C	AluSz	SINE/Alu	(17)	295	1	4089579
926	11.2	1.6	0.8	chr9	74817364	74817488	(63577229)	C	AluJo	SINE/Alu	(186)	126	1	4089986
228	30.9	8.2	6.4	chr9	76899586	76899754	(61494963)	C	L2b	LINE/L2	(1)	3386	3222	4093354
1062	32.1	2.5	1.8	chr9	78823272	78823715	(59571002)	C	LTR16A	LTR/ERVL	(0)	451	5	4096321
26	20.9	1.8	0.0	chr9	79257119	79257174	(59137543)	+	(CT)n	Simple_repeat	1	57	(0)	4096976
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
13	19.5	0.0	2.7	chr9	79572840	79572876	(58821841)	+	G-rich	Low_complexity	1	37	(0)	4097448
1640	22.5	3.0	2.2	chr9	79686382	79686836	(58707881)	+	MLT1C	LTR/ERVL-MaLR	7	465	(2)	4097598
354	36.3	11.5	1.4	chr9	79761612	79761780	(58632937)	+	MIRb	SINE/MIR	7	197	(71)	4097713
13	7.0	6.2	2.9	chr9	83066853	83066884	(55327833)	+	(TTTGG)n	Simple_repeat	1	34	(0)	4102324
14	9.3	0.0	0.0	chr9	83707680	83707702	(54687015)	+	(GGC)n	Simple_repeat	1	23	(0)	4103350
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
331	36.9	2.0	2.5	chr9	85424915	85425081	(52969636)	C	MER5A	DNA/hAT-Charlie	(4)	185	8	4106192
18	18.9	1.1	10.1	chr9	86099514	86099601	(52295116)	+	(GCGCCCA)n	Simple_repeat	1	89	(0)	4107302
10396	17.7	4.5	2.4	chr9	86463935	86465860	(51928857)	C	L1M1	LINE/L1	(5369)	2196	204	4107918
276	31.8	11.2	1.4	chr9	88502717	88502933	(49891784)	C	L2b	LINE/L2	(20)	3355	3115	4111298
628	25.9	9.0	2.5	chr9	88502978	88503258	(49891459)	C	LTR65	LTR/ERV1	(55)	614	314	4111299
815	13.8	0.8	2.3	chr9	89310323	89310452	(49084265)	C	FLAM_A	SINE/Alu	(10)	132	5	4112388
2657	24.3	4.0	0.3	chr9	89557589	89558215	(48836502)	+	Tigger17a	DNA/TcMar-Tigger	2	652	(2)	4112656
590	21.9	1.5	0.0	chr9	90647166	90647293	(47747424)	C	MER5A	DNA/hAT-Charlie	(0)	189	60	4114130
14	32.2	0.0	1.6	chr9	91424464	91424526	(46970191)	+	(CGCGG)n	Simple_repeat	1	63	(0)	4115185
963	23.2	6.4	14.1	chr9	91942610	91942985	(46451732)	+	MLT1C	LTR/ERVL-MaLR	46	467	(0)	4115958
1754	27.6	8.4	2.1	chr9	91942988	91943813	(46450904)	C	L1MC4a	LINE/L1	(960)	7082	6185	4115956
2548	5.3	0.3	0.0	chr9	92115681	92115979	(46278738)	C	AluSp	SINE/Alu	(13)	300	1	4116218
255	29.7	11.9	1.7	chr9	92670393	92670512	(45724205)	+	MIRc	SINE/MIR	37	170	(92)	4117046
2544	8.4	0.3	0.7	chr9	92871948	92872257	(45522460)	+	AluSp	SINE/Alu	1	309	(4)	4117347
1147	20.4	2.1	12.5	chr9	92872258	92872423	(45522294)	+	MLT1D	LTR/ERVL-MaLR	186	341	(164)	4117346
806	4.5	0.0	0.0	chr9	92872424	92872512	(45522205)	+	AluSp	SINE/Alu	217	305	(8)	4117348
1243	22.3	3.4	3.7	chr9	92872515	92872840	(45521877)	+	MLT1D	LTR/ERVL-MaLR	179	503	(2)	4117349
1517	16.9	2.6	5.4	chr9	92915511	92915789	(45478928)	+	AluJb	SINE/Alu	3	273	(39)	4117399
48	10.8	2.0	5.8	chr9	92915790	92915890	(45478827)	+	(TA)n	Simple_repeat	1	103	(0)	4117400
13	13.2	6.1	0.0	chr9	93566861	93566893	(44827824)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	4118315
17	9.2	5.7	0.0	chr9	95206163	95206197	(43188520)	+	(GAGGAAG)n	Simple_repeat	1	37	(0)	4120838
1044	34.3	8.2	1.9	chr9	95297933	95298557	(43096160)	C	L2c	LINE/L2	(508)	2911	2244	4120982
392	22.1	16.0	0.0	chr9	95442392	95442522	(42952195)	C	MER5A	DNA/hAT-Charlie	(21)	168	13	4121247
20	32.1	1.1	2.1	chr9	95508936	95509027	(42885690)	+	(GCT)n	Simple_repeat	1	93	(0)	4121306
17	3.5	3.2	3.1	chr9	95509243	95509273	(42885444)	+	(GAGGG)n	Simple_repeat	1	32	(0)	4121307
864	28.3	6.6	1.6	chr9	95839007	95839394	(42555323)	+	LTR16C	LTR/ERVL	1	409	(80)	4121837
18	3.3	6.5	0.0	chr9	96654925	96654955	(41739762)	+	(CCTCGC)n	Simple_repeat	1	33	(0)	4123268
23	24.9	1.5	0.0	chr9	96655321	96655386	(41739331)	+	G-rich	Low_complexity	1	67	(0)	4123269
711	27.3	10.2	0.7	chr9	97411417	97411726	(40982991)	C	L2a	LINE/L2	(8)	3418	3076	4124477
27	12.0	0.0	0.0	chr9	97412046	97412091	(40982626)	+	(GCGGG)n	Simple_repeat	1	46	(0)	4124478
16	14.9	2.6	2.5	chr9	97412150	97412188	(40982529)	+	(GGC)n	Simple_repeat	1	40	(0)	4124479
521	31.4	9.9	1.0	chr9	97632141	97632333	(40762384)	C	L2a	LINE/L2	(257)	3169	2958	4124835
1722	13.8	1.4	4.9	chr9	97632382	97632685	(40762032)	C	AluJb	SINE/Alu	(19)	293	1	4124841
432	32.8	6.3	1.6	chr9	97876555	97876796	(40517921)	C	L2	LINE/L2	(932)	2487	2234	4125311
285	31.3	11.5	0.0	chr9	97877078	97877192	(40517525)	C	L3	LINE/CR1	(78)	4021	3892	4125312
1163	27.4	7.4	8.3	chr9	99705758	99706453	(38688264)	+	HAL1	LINE/L1	676	1364	(1143)	4128942
12	18.3	0.0	3.0	chr9	100427024	100427056	(37967661)	+	G-rich	Low_complexity	1	33	(0)	4130119
26	20.7	3.0	8.8	chr9	100427145	100427277	(37967440)	+	(CGG)n	Simple_repeat	1	137	(0)	4130120
446	25.4	4.5	0.8	chr9	100696799	100696925	(37697792)	C	MER102c	DNA/hAT-Charlie	(1)	330	199	4130593
2793	22.3	4.7	2.5	chr9	100697054	100697821	(37696896)	C	MER63C	DNA/hAT-Blackjack	(0)	930	145	4130594
1076	31.5	4.8	1.9	chr9	101226740	101227160	(37167557)	+	MamGypLTR1a	LTR/Gypsy	151	584	(200)	4131372
333	26.0	1.0	3.9	chr9	101227175	101227278	(37167439)	+	MamGypLTR1a	LTR/Gypsy	636	736	(48)	4131372
1667	7.1	0.5	0.5	chr9	104763582	104763791	(33630926)	+	AluY	SINE/Alu	83	292	(19)	4136223
3654	13.6	0.5	6.4	chr9	105052976	105053440	(33341277)	+	LTR26	LTR/ERV1	10	448	(155)	4136782
2225	14.5	0.0	0.0	chr9	105053441	105053737	(33340980)	+	AluSx1	SINE/Alu	1	297	(15)	4136783
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
77	12.9	3.7	0.0	chr9	106863000	106863135	(31531582)	+	GA-rich	Low_complexity	1	141	(0)	4139694
63	19.1	0.7	2.7	chr9	106863510	106863655	(31531062)	+	GA-rich	Low_complexity	1	147	(0)	4139695
2174	11.8	0.0	0.0	chr9	108832420	108832707	(29562010)	C	AluSz	SINE/Alu	(24)	288	1	4143367
362	26.3	9.0	3.2	chr9	108833126	108833282	(29561435)	C	LTR85a	LTR/Gypsy?	(3)	699	533	4143368
277	16.4	14.7	5.7	chr9	109055393	109055515	(29339202)	+	HAL1	LINE/L1	803	938	(1569)	4143723
345	27.8	5.7	5.3	chr9	109055552	109055625	(29339092)	+	HAL1	LINE/L1	1032	1109	(1398)	4143723
2514	8.4	0.3	0.0	chr9	109055626	109055933	(29338784)	C	AluSp	SINE/Alu	(4)	309	1	4143724
3851	12.1	0.4	0.0	chr9	109151258	109151784	(29242933)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	4143898
13	27.4	0.0	6.2	chr9	111484194	111484257	(26910460)	+	G-rich	Low_complexity	1	64	(0)	4147933
15	21.9	1.4	8.0	chr9	112174773	112174846	(26219871)	+	(CGCCC)n	Simple_repeat	1	75	(0)	4149310
14	9.6	0.0	0.0	chr9	112175174	112175196	(26219521)	+	(AGC)n	Simple_repeat	1	23	(0)	4149311
13	18.9	4.5	2.2	chr9	112333142	112333185	(26061532)	+	(CCGCGGA)n	Simple_repeat	1	46	(0)	4149606
35	24.5	3.9	2.2	chr9	112333644	112333773	(26060944)	+	(CGCCCC)n	Simple_repeat	1	135	(0)	4149607
11	19.5	10.0	1.5	chr9	113060165	113060224	(25334493)	+	(GCCAGCTGC)n	Simple_repeat	1	66	(0)	4150941
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
26	0.0	0.0	0.0	chr9	114611534	114611558	(23783159)	+	(GGC)n	Simple_repeat	1	25	(0)	4154053
415	33.5	4.7	0.3	chr9	114611909	114612099	(23782618)	+	MIR3	SINE/MIR	1	197	(11)	4154054
249	27.1	11.2	3.4	chr9	115369059	115369223	(23025494)	C	MIRc	SINE/MIR	(26)	182	7	4155488
1900	17.7	1.6	0.0	chr9	120624229	120624527	(17770190)	C	AluJb	SINE/Alu	(8)	304	1	4165380
11	13.9	2.0	10.0	chr9	120929026	120929074	(17465643)	+	G-rich	Low_complexity	1	50	(0)	4166014
368	28.0	9.4	7.5	chr9	122221858	122222085	(16172632)	+	MIR	SINE/MIR	14	246	(16)	4168581
631	26.6	9.3	5.8	chr9	122233987	122234277	(16160440)	C	L2c	LINE/L2	(10)	3377	3076	4168603
191	21.4	0.0	0.0	chr9	122234332	122234373	(16160344)	C	L2c	LINE/L2	(436)	2951	2910	4168603
453	28.3	3.4	3.9	chr9	122234454	122234659	(16160058)	+	MIRb	SINE/MIR	4	208	(60)	4168604
1378	19.1	4.2	0.7	chr9	122474779	122475079	(15919638)	+	MER65D	LTR/ERV1	157	468	(5)	4169069
13	11.5	7.5	2.3	chr9	122475171	122475210	(15919507)	+	G-rich	Low_complexity	1	43	(0)	4169071
647	33.5	5.2	2.4	chr9	122475401	122475736	(15918981)	C	LTR78	LTR/ERV1	(958)	346	1	4169072
624	18.3	1.5	6.4	chr9	123327067	123327137	(15067580)	C	Charlie4a	DNA/hAT-Charlie	(1)	507	443	4170507
2291	12.5	0.0	0.0	chr9	123327138	123327449	(15067268)	C	AluSq	SINE/Alu	(1)	312	1	4170508
2204	12.3	0.0	0.3	chr9	124431277	124431577	(13963140)	+	AluSx	SINE/Alu	1	300	(12)	4172557
848	29.8	10.8	7.3	chr9	124431591	124431847	(13962870)	C	ERVL-B4-int	LTR/ERVL	(2874)	2840	2427	4172554
2403	8.6	0.0	0.7	chr9	124431848	124432149	(13962568)	C	AluSx3	SINE/Alu	(11)	300	1	4172558
199	26.6	3.5	2.2	chr9	124752985	124753056	(13641661)	+	MIRc	SINE/MIR	81	148	(82)	4173169
1024	19.8	16.9	0.0	chr9	124753076	124753404	(13641313)	+	MER113	DNA/hAT-Charlie	1	396	(125)	4173170
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
1776	8.9	6.6	5.2	chr9	125235208	125235476	(13159241)	C	AluSc	SINE/Alu	(13)	296	24	4174229
2380	10.9	0.0	0.0	chr9	125386653	125386963	(13007754)	+	AluSx1	SINE/Alu	1	311	(1)	4174564
2185	11.0	0.0	0.0	chr9	125387114	125387395	(13007322)	+	AluSx	SINE/Alu	2	283	(29)	4174565
419	22.9	9.1	1.4	chr9	126754335	126754476	(11640241)	C	MIR	SINE/MIR	(27)	235	82	4176969
198	26.8	1.4	1.4	chr9	126754541	126754612	(11640105)	+	L2b	LINE/L2	2984	3055	(320)	4176970
356	31.4	2.7	0.0	chr9	126754651	126754830	(11639887)	C	MIR3	SINE/MIR	(77)	185	2	4176971
29	0.0	5.7	0.0	chr9	126860784	126860818	(11533899)	+	(GGCGGGGCA)n	Simple_repeat	1	37	(0)	4177202
16	10.6	10.3	5.3	chr9	127225239	127225306	(11169411)	+	(GCCCGA)n	Simple_repeat	1	75	(0)	4177820
41	4.1	2.0	0.0	chr9	127225801	127225851	(11168866)	+	(GCCCCTCGC)n	Simple_repeat	1	52	(0)	4177821
358	26.5	15.2	1.9	chr9	127753834	127753987	(10640730)	+	MIR3	SINE/MIR	6	183	(25)	4178933
31	27.1	1.4	5.6	chr9	127785379	127785520	(10609197)	+	(GGC)n	Simple_repeat	1	144	(0)	4179013
1844	9.8	9.3	1.4	chr9	128192114	128192399	(10202318)	+	AluJb	SINE/Alu	1	311	(1)	4179939
13	8.5	4.0	0.0	chr9	128457127	128457151	(9937566)	+	(CCCCT)n	Simple_repeat	1	26	(0)	4180572
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
2196	10.6	0.3	0.0	chr9	128922937	128923243	(9471474)	C	AluSq2	SINE/Alu	(0)	313	1	4181648
1002	13.9	1.8	3.0	chr9	128923244	128923377	(9471340)	C	AluJo	SINE/Alu	(178)	134	1	4181647
301	33.7	7.3	0.6	chr9	128923508	128923674	(9471043)	C	L1M5	LINE/L1	(281)	5843	5665	4181649
19	11.1	3.6	6.9	chr9	129413351	129413410	(8981307)	+	(GCCGCCC)n	Simple_repeat	1	58	(0)	4182762
444	22.2	4.8	0.0	chr9	129726428	129726526	(8668191)	+	MIR	SINE/MIR	74	177	(85)	4183491
12	29.6	0.0	2.0	chr9	130042848	130042898	(8351819)	+	(CGCCCC)n	Simple_repeat	1	51	(0)	4184176
16	15.4	2.8	0.0	chr9	130043221	130043256	(8351461)	+	GA-rich	Low_complexity	1	37	(0)	4184177
15	23.6	5.5	0.0	chr9	130043273	130043342	(8351375)	+	(CGCCCC)n	Simple_repeat	1	73	(0)	4184178
12	17.4	4.9	2.3	chr9	130684080	130684120	(7710597)	+	(AGTCAGAG)n	Simple_repeat	1	43	(0)	4185578
2080	9.3	4.1	0.4	chr9	130684504	130684783	(7709934)	C	AluSq2	SINE/Alu	(9)	304	14	4185579
15	4.1	0.0	6.9	chr9	132161956	132161984	(6232733)	+	(CGGG)n	Simple_repeat	1	29	(0)	4188351
21	13.4	2.4	0.0	chr9	132162065	132162105	(6232612)	+	(CGG)n	Simple_repeat	1	42	(0)	4188352
11	24.0	2.6	0.0	chr9	132162116	132162154	(6232563)	+	(GCGCCCC)n	Simple_repeat	1	40	(0)	4188353
226	31.9	3.1	0.7	chr9	133509099	133509218	(4885499)	C	MIR1_Amn	SINE/MIR	(65)	203	82	4190701
2505	8.6	0.0	0.6	chr9	133831154	133831468	(4563249)	+	AluSq2	SINE/Alu	1	313	(0)	4191131
616	30.5	4.5	0.5	chr9	133831815	133832028	(4562689)	+	MIR	SINE/MIR	22	244	(18)	4191132
27	0.0	6.1	0.0	chr9	136545985	136546017	(1848700)	+	(CGCGCCC)n	Simple_repeat	1	35	(0)	4194481
186	39.1	0.2	0.8	chr9	136630737	136631565	(1763152)	+	(ACAC)n	Simple_repeat	1	831	(0)	4194567
447	32.3	4.8	1.1	chr9	136631862	136632121	(1762596)	+	L1M4	LINE/L1	3071	3340	(2806)	4194568
12	22.1	0.0	0.0	chr9	136808477	136808508	(1586209)	+	(GGCCA)n	Simple_repeat	1	32	(0)	4194831
419	33.4	6.3	9.7	chr9	137860410	137861312	(533405)	C	L1MEf	LINE/L1	(5454)	946	44	4196237
4046	10.9	4.7	0.5	chrX	8213971	8214588	(147826307)	+	LTR9D	LTR/ERV1	1	645	(0)	4372827
4470	26.6	5.9	4.6	chrX	10396933	10397846	(145643049)	C	HAL1	LINE/L1	(1069)	1438	510	4376430
1050	20.5	3.7	0.0	chrX	10397847	10398056	(145642839)	C	MER20	DNA/hAT-Charlie	(1)	218	1	4376432
2065	10.3	1.8	0.0	chrX	15585986	15586256	(140454639)	+	AluSz	SINE/Alu	19	294	(18)	4384612
12	21.4	2.1	4.2	chrX	16719564	16719610	(139321285)	+	(GCGGCG)n	Simple_repeat	1	48	(0)	4386549
12	16.7	3.7	7.1	chrX	16946718	16946738	(139094157)	+	(GCGGTG)n	Simple_repeat	1	23	(0)	4387050
29	5.9	0.0	0.0	chrX	16946739	16946774	(139094121)	+	(GGC)n	Simple_repeat	1	36	(0)	4387051
12	16.7	3.7	7.1	chrX	16946775	16946806	(139094089)	+	(GCGGTG)n	Simple_repeat	6	34	(0)	4387052
31	9.3	0.0	0.0	chrX	16946867	16946913	(139093982)	+	(GGC)n	Simple_repeat	1	47	(0)	4387053
57	0.0	0.0	0.0	chrX	19990923	19990973	(136049922)	+	(CCG)n	Simple_repeat	1	51	(0)	4392338
16	7.4	0.0	6.1	chrX	19991076	19991108	(136049787)	+	(CCGCC)n	Simple_repeat	1	33	(0)	4392339
967	21.8	15.3	3.2	chrX	21738590	21738936	(134301959)	+	LTR16B2	LTR/ERVL	2	409	(53)	4394849
14	12.3	2.6	5.0	chrX	24025340	24025378	(132015517)	+	(GGCGG)n	Simple_repeat	1	40	(0)	4398622
19	17.6	2.2	0.0	chrX	24025694	24025738	(132015157)	+	G-rich	Low_complexity	1	46	(0)	4398623
12	14.3	4.8	4.5	chrX	24025746	24025787	(132015108)	+	(GTCCCGC)n	Simple_repeat	1	44	(0)	4398624
298	25.6	6.9	5.5	chrX	24204921	24205048	(131835847)	+	L2c	LINE/L2	3257	3386	(1)	4399067
326	23.9	8.3	3.3	chrX	24259811	24259900	(131780995)	C	MER5A	DNA/hAT-Charlie	(3)	186	92	4399172
1474	19.1	10.3	2.7	chrX	24259901	24260307	(131780588)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	4399173
628	10.6	2.1	0.0	chrX	24260308	24260399	(131780496)	C	MER5A	DNA/hAT-Charlie	(93)	96	3	4399174
628	24.4	5.9	3.4	chrX	28141984	28142246	(127898649)	+	LTR37B	LTR/ERV1	198	467	(1)	4404784
4111	21.6	5.6	2.6	chrX	28142308	28143450	(127897445)	+	LTR37-int	LTR/ERV1	79	1257	(2803)	4404784
1343	27.1	4.7	4.9	chrX	39749758	39750249	(116290646)	+	MLT1J	LTR/ERVL-MaLR	3	493	(19)	4421106
1834	23.1	3.2	2.2	chrX	39750506	39751033	(116289862)	+	MLT1G1	LTR/ERVL-MaLR	1	579	(0)	4421107
15	8.5	0.0	0.0	chrX	39954029	39954053	(116086842)	+	(GGCA)n	Simple_repeat	1	25	(0)	4421512
824	22.5	5.7	1.0	chrX	39984200	39984401	(116056494)	C	LTR16C	LTR/ERVL	(72)	417	206	4421571
17	15.7	0.0	6.2	chrX	40097513	40097560	(115943335)	+	G-rich	Low_complexity	1	48	(0)	4421760
15	12.2	0.0	0.0	chrX	40097719	40097745	(115943150)	+	(TGTG)n	Simple_repeat	1	27	(0)	4421761
14	19.6	2.2	4.3	chrX	40097789	40097833	(115943062)	+	(CCG)n	Simple_repeat	1	46	(0)	4421762
38	15.1	2.4	2.3	chrX	40097986	40098134	(115942761)	+	(TCCC)n	Simple_repeat	1	149	(0)	4421763
16	11.2	0.0	0.0	chrX	40149149	40149177	(115891718)	+	(CTCTG)n	Simple_repeat	1	29	(0)	4421856
13	26.0	1.9	1.9	chrX	40735602	40735653	(115305242)	+	G-rich	Low_complexity	1	53	(0)	4422997
331	18.0	10.9	6.7	chrX	41112739	41112887	(114928008)	+	Chap1_Mam	DNA/hAT-Charlie	50	205	(137)	4423697
2363	9.3	0.7	0.0	chrX	41113197	41113498	(114927397)	C	AluY	SINE/Alu	(7)	304	1	4423698
2274	9.0	1.0	0.0	chrX	41381340	41381629	(114659266)	C	AluSx3	SINE/Alu	(18)	293	1	4424255
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
601	25.5	0.7	6.6	chrX	44531401	44531551	(111509344)	C	HAL1	LINE/L1	(1708)	799	658	4429078
664	21.4	4.3	13.5	chrX	44531555	44531765	(111509130)	+	HAL1	LINE/L1	772	963	(1544)	4429078
46	0.0	0.0	0.0	chrX	44531766	44531804	(111509091)	+	(AC)n	Simple_repeat	1	39	(0)	4429079
664	21.4	4.3	13.5	chrX	44531805	44531851	(111509044)	+	HAL1	LINE/L1	964	1005	(1502)	4429078
12	7.7	0.0	9.1	chrX	44872809	44872841	(111168054)	+	(CCTCC)n	Simple_repeat	1	33	(0)	4429938
3652	6.4	2.9	0.2	chrX	47832093	47832533	(108208362)	C	MLT2A2	LTR/ERVL	(0)	453	1	4434891
14	23.8	2.0	1.9	chrX	49053966	49054016	(106986879)	+	(ACCCCTG)n	Simple_repeat	1	52	(0)	4437396
478	26.8	0.0	0.0	chrX	49626762	49626888	(106414007)	C	L2a	LINE/L2	(3)	3423	3297	4438123
5119	15.7	6.3	4.6	chrX	52604465	52604653	(103436242)	+	Tigger1	DNA/TcMar-Tigger	1	242	(2176)	4442113
1476	9.4	1.4	0.0	chrX	52604654	52604866	(103436029)	C	L1MA2	LINE/L1	(0)	6304	6089	4442114
13	19.6	0.0	0.0	chrX	56995464	56995493	(99045402)	+	(GGC)n	Simple_repeat	1	30	(0)	4448724
2176	14.4	2.3	2.3	chrX	68438908	68439444	(87601451)	+	MER51A	LTR/ERV1	1	640	(0)	4456296
670	14.0	0.0	1.0	chrX	68439445	68439545	(87601350)	+	MLT1A0	LTR/ERVL-MaLR	266	365	(0)	4456295
289	24.7	3.6	2.4	chrX	68439590	68439672	(87601223)	C	MIRc	SINE/MIR	(108)	160	77	4456297
17	17.3	1.7	6.7	chrX	69165279	69165337	(86875558)	+	(CGCGCC)n	Simple_repeat	1	60	(0)	4457674
13	11.2	3.2	3.1	chrX	69165481	69165511	(86875384)	+	(GCG)n	Simple_repeat	1	32	(0)	4457675
250	24.8	11.0	0.0	chrX	69165612	69165732	(86875163)	C	L1ME3Cz	LINE/L1	(6)	991	856	4457676
489	32.4	12.4	2.2	chrX	72067967	72068241	(83972654)	+	L2b	LINE/L2	3069	3375	(0)	4462636
269	31.9	4.3	1.5	chrX	72181005	72181141	(83859754)	C	L1ME4c	LINE/L1	(221)	609	469	4462844
443	22.8	6.5	0.0	chrX	72620548	72620648	(83420247)	C	L2a	LINE/L2	(0)	3426	3319	4463636
9569	12.5	6.2	3.9	chrX	73905284	73906794	(82134101)	+	THE1B-int	LTR/ERVL-MaLR	3	1550	(81)	4464895
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
2934	9.4	1.4	0.5	chrX	74179751	74180188	(81860707)	+	HERVK3-int	LTR/ERVK	2414	2855	(4347)	4465236
1389	7.9	0.0	0.0	chrX	74180192	74180380	(81860515)	+	HERVK3-int	LTR/ERVK	4078	4266	(2936)	4465236
2013	16.6	0.0	0.0	chrX	74242609	74242904	(81797991)	C	7SLRNA	srpRNA	(22)	298	3	4465316
195	28.0	12.3	9.2	chrX	74243163	74243335	(81797560)	+	MIR	SINE/MIR	81	259	(3)	4465317
1289	12.5	0.0	0.0	chrX	74253889	74254088	(81786807)	+	LTR9B	LTR/ERV1	445	644	(0)	4465335
468	17.2	3.1	5.1	chrX	74254089	74254186	(81786709)	+	HUERS-P3b-int	LTR/ERV1	1	96	(7322)	4465335
794	9.6	10.6	0.7	chrX	74254190	74254325	(81786570)	+	HUERS-P3b-int	LTR/ERV1	409	559	(6859)	4465335
13191	10.0	16.3	12.4	chrX	74254334	74256146	(81784749)	+	HUERS-P3b-int	LTR/ERV1	747	2912	(4506)	4465335
1053	20.2	0.0	0.0	chrX	74312462	74312634	(81728261)	C	FAM	SINE/Alu	(0)	185	13	4465433
1852	18.8	7.9	7.6	chrX	74343991	74344242	(81696653)	+	LTR55	LTR/ERVL?	286	531	(17)	4465489
54	0.0	0.0	0.0	chrX	74382544	74382589	(81658306)	+	(CA)n	Simple_repeat	1	46	(0)	4465543
223	23.1	1.9	0.0	chrX	74382619	74382670	(81658225)	+	MIR3	SINE/MIR	150	202	(6)	4465537
2171	12.0	0.0	0.7	chrX	76173222	76173522	(79867373)	C	AluJb	SINE/Alu	(13)	299	1	4467323
12	21.7	0.0	0.0	chrX	77899771	77899802	(78141093)	+	(TTTCTG)n	Simple_repeat	1	32	(0)	4469103
21	19.2	1.8	1.8	chrX	103832218	103832277	(52208618)	+	(CGCCCG)n	Simple_repeat	1	60	(0)	4499219
2411	16.6	1.0	1.5	chrX	104000001	104000404	(52040491)	C	MER1A	DNA/hAT-Charlie	(127)	402	1	4499432
2751	19.9	3.9	3.1	chrX	104000407	104001022	(52039873)	C	LTR49-int	LTR/ERV1	(5710)	621	1	4499433
15	11.2	0.0	3.2	chrX	106177416	106177446	(49863449)	+	(AAAGA)n	Simple_repeat	1	31	(0)	4502465
33	23.2	1.7	5.0	chrX	107826209	107826325	(48214570)	+	(GCG)n	Simple_repeat	1	119	(0)	4504922
13	19.7	10.3	0.0	chrX	107826688	107826745	(48214150)	+	G-rich	Low_complexity	1	64	(0)	4504923
1223	26.3	7.5	7.5	chrX	111825558	111826034	(44214861)	C	LTR33A	LTR/ERVL	(35)	485	9	4510461
463	23.7	7.3	4.8	chrX	111826044	111826189	(44214706)	C	MIR	SINE/MIR	(110)	152	3	4510464
3832	15.5	0.9	10.4	chrX	115719438	115719631	(40321264)	C	L1PB1	LINE/L1	(0)	6151	5974	4516051
1997	12.0	0.0	4.0	chrX	115719632	115719930	(40320965)	C	AluSz	SINE/Alu	(25)	287	1	4516052
11	6.9	2.6	10.3	chrX	118565923	118565960	(37474935)	+	A-rich	Low_complexity	1	39	(0)	4519491
438	27.5	7.4	6.4	chrX	119729736	119729937	(36310958)	C	MIR	SINE/MIR	(2)	260	57	4521683
12	9.7	0.0	0.0	chrX	119730152	119730173	(36310722)	+	(AATA)n	Simple_repeat	1	22	(0)	4521684
2083	10.4	0.3	0.0	chrX	119730175	119730461	(36310434)	+	AluSg	SINE/Alu	1	288	(22)	4521685
17	27.1	0.0	3.3	chrX	120250794	120250854	(35790041)	+	(CGG)n	Simple_repeat	1	61	(0)	4522654
3028	18.2	3.7	0.0	chrX	120334634	120335133	(35705762)	+	LTR53	LTR/ERVL	1	519	(0)	4522779
2310	6.5	0.4	0.0	chrX	120497803	120498078	(35542817)	C	AluSx	SINE/Alu	(35)	277	1	4523057
4150	12.5	1.6	4.7	chrX	127945516	127946235	(28094660)	C	MER50B	LTR/ERV1	(0)	697	1	4532830
294	31.7	0.0	1.4	chrX	128016875	128017018	(28023877)	+	L1MEc	LINE/L1	595	736	(5664)	4532902
475	22.6	0.0	0.0	chrX	128017078	128017161	(28023734)	+	FLAM_A	SINE/Alu	41	124	(18)	4532903
1847	27.4	11.9	1.7	chrX	128017196	128018243	(28022652)	+	L1MEc	LINE/L1	1033	2201	(4199)	4532902
226	27.8	0.0	4.0	chrX	130247795	130247869	(25793026)	+	HAL1	LINE/L1	485	556	(1951)	4536226
403	27.9	5.2	2.7	chrX	130247927	130248114	(25792781)	+	HAL1	LINE/L1	750	942	(1565)	4536226
12300	15.7	2.8	0.3	chrX	130248106	130250166	(25790729)	+	L1PA13	LINE/L1	7	2119	(4666)	4536227
12	33.8	1.7	0.0	chrX	130506863	130506921	(25533974)	+	(TTTC)n	Simple_repeat	1	60	(0)	4536653
424	14.8	23.1	1.0	chrX	130506938	130507038	(25533857)	C	FLAM_C	SINE/Alu	(13)	130	1	4536654
35	30.5	3.3	2.7	chrX	130507203	130507384	(25533511)	+	(CTTC)n	Simple_repeat	1	188	(0)	4536655
17	32.7	2.7	0.0	chrX	130507426	130507499	(25533396)	+	(ATCT)n	Simple_repeat	1	76	(0)	4536656
14	15.3	2.6	2.6	chrX	130524336	130524373	(25516522)	+	(GGAGTGG)n	Simple_repeat	1	39	(0)	4536676
42	0.0	0.0	2.3	chrX	132218094	132218136	(23822759)	+	(CCCACC)n	Simple_repeat	1	43	(0)	4539076
575	24.0	3.1	3.1	chrX	134372652	134372810	(21668085)	C	MIRb	SINE/MIR	(14)	254	96	4542539
201	29.1	0.0	0.0	chrX	134372880	134372934	(21667961)	+	MIRc	SINE/MIR	171	225	(43)	4542540
1853	15.6	3.2	0.0	chrX	134421947	134422221	(21618674)	C	AluJb	SINE/Alu	(28)	284	1	4542626
388	27.0	5.9	2.9	chrX	134422222	134422346	(21618549)	C	L1ME4a	LINE/L1	(296)	5828	5697	4542624
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
860	15.9	0.0	0.0	chrX	135099927	135100058	(20940837)	C	AluJo	SINE/Alu	(23)	289	158	4543937
2840	21.1	2.4	3.7	chrX	135100070	135100513	(20940382)	+	L1MDa	LINE/L1	1892	2340	(4293)	4543938
17	31.5	1.3	1.3	chrX	135422100	135422175	(20618720)	+	(CGGCGG)n	Simple_repeat	1	77	(0)	4544315
15	6.7	6.1	2.9	chrX	135521657	135521689	(20519206)	+	GA-rich	Low_complexity	1	35	(0)	4544493
1894	13.2	4.8	2.0	chrX	135596056	135596357	(20444538)	+	AluJo	SINE/Alu	2	312	(0)	4544590
468	31.1	12.1	1.9	chrX	135596360	135596825	(20444070)	C	LTR41	LTR/ERVL	(229)	539	20	4544591
2087	19.4	6.8	0.2	chrX	135687693	135688218	(20352677)	+	L1M4	LINE/L1	3107	3669	(2477)	4544669
604	29.4	0.6	1.7	chrX	135688501	135688673	(20352222)	+	LTR41	LTR/ERVL	366	536	(232)	4544670
1980	12.5	4.8	0.3	chrX	135688674	135688969	(20351926)	C	AluJo	SINE/Alu	(1)	311	2	4544671
17	20.4	2.2	0.0	chrX	136909304	136909348	(19131547)	+	G-rich	Low_complexity	1	46	(0)	4546851
426	28.4	12.0	0.5	chrX	137083856	137084039	(18956856)	C	MIRb	SINE/MIR	(20)	248	41	4547154
679	25.1	8.4	0.0	chrX	140572856	140573018	(15467877)	+	MER91A	DNA/hAT-Tip100	19	196	(0)	4552449
184	33.3	0.0	0.0	chrX	150229387	150229458	(5811437)	+	MIRb	SINE/MIR	189	260	(8)	4565601
11	30.4	4.3	1.4	chrX	150568901	150568970	(5471925)	+	G-rich	Low_complexity	1	73	(0)	4566107
1121	11.9	0.0	0.6	chrX	153032541	153032699	(3008196)	C	AluJr	SINE/Alu	(17)	295	138	4569752
2370	10.8	0.0	0.0	chrX	153895145	153895449	(2145446)	C	AluSq	SINE/Alu	(8)	305	1	4570903
1562	25.1	8.0	5.7	chrX	153895450	153895600	(2145295)	+	HAL1	LINE/L1	821	955	(1552)	4570902
2200	10.7	0.0	0.3	chrX	153895601	153895890	(2145005)	+	AluSg	SINE/Alu	1	289	(21)	4570904
2062	13.6	0.7	0.0	chrX	154117100	154117408	(1923487)	C	AluSz6	SINE/Alu	(1)	311	1	4571293
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057