633	13.8	3.3	0.0	chr1	788635	788750	(248167672)	C	MER67C	LTR/ERV1	(0)	711	592	1025
30	0.0	10.9	0.0	chr1	791053	791098	(248165324)	+	(GGAATG)n	Simple_repeat	1	51	(0)	1026
2181	9.9	0.7	0.0	chr1	991544	991825	(247964597)	C	AluSp	SINE/Alu	(29)	284	1	1240
847	20.1	5.2	6.5	chr1	991826	991915	(247964507)	C	L1MEc	LINE/L1	(1977)	4342	4253	1233
924	24.2	8.8	2.4	chr1	991966	992151	(247964271)	C	L1MEc	LINE/L1	(5005)	1395	1188	1233
2292	10.1	0.3	3.5	chr1	992152	992469	(247963953)	C	AluSx1	SINE/Alu	(4)	308	1	1241
1406	15.2	13.2	2.1	chr1	1192109	1192383	(247764039)	C	L1MB8	LINE/L1	(3499)	3145	2820	1447
4754	16.8	8.4	6.4	chr1	1192842	1193044	(247763378)	C	L1MB8	LINE/L1	(3800)	2844	2568	1447
30	2.1	5.7	3.6	chr1	1366336	1366388	(247590034)	+	(GTGTGAATG)n	Simple_repeat	1	56	(0)	1627
427	16.9	2.0	0.2	chr1	3370789	3371596	(245584826)	+	(CCAT)n	Simple_repeat	1	824	(0)	3949
438	32.6	1.1	2.1	chr1	3725366	3726967	(245229455)	+	G-rich	Low_complexity	1	1620	(0)	4274
212	22.4	2.0	0.0	chr1	4302801	4302849	(244653573)	C	MIRc	SINE/MIR	(129)	139	90	5119
12	24.6	0.0	2.5	chr1	4302852	4302891	(244653531)	+	(TCC)n	Simple_repeat	1	40	(0)	5120
140	18.5	0.7	0.0	chr1	4302955	4302983	(244653439)	+	(TTCCA)n	Simple_repeat	1	31	(0)	5121
64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
485	20.5	2.1	0.8	chr1	6149586	6150660	(242805762)	+	(GATG)n	Simple_repeat	1	1098	(0)	7739
737	17.5	4.8	0.3	chr1	6174363	6175681	(242780741)	+	(GATG)n	Simple_repeat	1	1382	(0)	7776
35	7.0	0.0	0.0	chr1	6175682	6175727	(242780695)	+	(ATGG)n	Simple_repeat	1	46	(0)	7777
737	17.5	4.8	0.3	chr1	6175728	6176060	(242780362)	+	(GATG)n	Simple_repeat	3	346	(0)	7778
488	29.9	17.3	0.8	chr1	6491749	6492004	(242464418)	C	L3	LINE/CR1	(7)	4092	3786	8317
344	32.3	12.4	1.5	chr1	6492017	6492217	(242464205)	+	MIRb	SINE/MIR	35	260	(8)	8318
224	18.8	2.3	0.8	chr1	7884690	7885164	(241071258)	+	(CATC)n	Simple_repeat	1	486	(0)	10475
336	31.0	10.3	12.1	chr1	8685828	8685980	(240270442)	C	L2a	LINE/L2	(934)	2485	2330	12049
1974	16.9	0.0	0.7	chr1	8685981	8686282	(240270140)	C	AluJb	SINE/Alu	(12)	300	1	12050
255	24.1	1.4	0.0	chr1	9356789	9357378	(239599044)	+	(ATGG)n	Simple_repeat	1	598	(0)	13418
2334	9.2	0.0	2.2	chr1	9542805	9543118	(239413304)	C	AluSz6	SINE/Alu	(4)	308	2	13852
1962	15.1	0.0	2.2	chr1	10351684	10352000	(238604422)	+	AluJo	SINE/Alu	1	310	(2)	15610
332	31.7	3.1	3.6	chr1	10352285	10352477	(238603945)	C	L2	LINE/L2	(641)	2778	2587	15611
196	27.0	0.6	0.0	chr1	10806868	10807368	(238149054)	+	(ATCC)n	Simple_repeat	1	504	(0)	16372
245	28.6	1.1	8.1	chr1	10807369	10807467	(238148955)	C	L2a	LINE/L2	(0)	3426	3335	16373
402	32.6	0.0	1.8	chr1	10807538	10807685	(238148737)	+	MIR3	SINE/MIR	21	158	(50)	16374
457	22.1	1.3	4.0	chr1	12582732	12583981	(236372441)	+	(ATCC)n	Simple_repeat	1	1266	(0)	20026
17	0.0	0.0	0.0	chr1	12617860	12617878	(236338544)	+	(A)n	Simple_repeat	1	19	(0)	20095
18	19.8	0.0	4.0	chr1	12618036	12618085	(236338337)	+	(CGCT)n	Simple_repeat	1	50	(0)	20096
292	26.7	1.2	0.4	chr1	14844808	14844956	(234111466)	+	(TGGA)n	Simple_repeat	1	149	(0)	23981
27	6.1	0.0	0.0	chr1	14844957	14844991	(234111431)	+	(ATGG)n	Simple_repeat	1	35	(0)	23982
292	26.7	1.2	0.4	chr1	14844992	14845599	(234110823)	+	(TGGA)n	Simple_repeat	2	615	(0)	23983
2552	5.7	0.0	2.2	chr1	15396903	15397219	(233559203)	+	AluYm1	SINE/Alu	1	310	(1)	25166
12	31.0	0.0	1.9	chr1	15524014	15524066	(233432356)	+	G-rich	Low_complexity	1	53	(0)	25466
208	34.8	5.1	0.9	chr1	18098442	18098554	(230857868)	C	L2	LINE/L2	(482)	2937	2820	30926
284	26.8	8.5	0.0	chr1	18098883	18098979	(230857443)	+	L2b	LINE/L2	3257	3362	(13)	30927
182	33.8	5.5	0.0	chr1	18925681	18925748	(230030674)	+	L2a	LINE/L2	3345	3416	(10)	32708
363	2.9	0.0	2.5	chr1	18925749	18926152	(230030270)	+	(ATGG)n	Simple_repeat	1	404	(0)	32709
15	18.6	0.0	2.6	chr1	18926328	18926366	(230030056)	+	(AGGCC)n	Simple_repeat	1	39	(0)	32710
12	21.0	0.0	7.8	chr1	20633687	20633737	(228322685)	+	(GGCTCG)n	Simple_repeat	1	51	(0)	36240
188	20.0	1.3	2.8	chr1	22333591	22334043	(226622379)	+	(TGGA)n	Simple_repeat	1	459	(0)	39927
50	3.2	1.5	2.9	chr1	22334071	22334137	(226622285)	+	(TGGA)n	Simple_repeat	1	68	(0)	39927
19	17.9	0.0	0.0	chr1	22336131	22336169	(226620253)	+	(GATG)n	Simple_repeat	1	39	(0)	39930
575	17.3	3.0	2.8	chr1	22336175	22337516	(226618906)	+	(CATC)n	Simple_repeat	1	1382	(0)	39931
925	12.6	0.0	0.7	chr1	22372496	22372630	(226583792)	+	AluSz6	SINE/Alu	1	134	(178)	40012
1412	17.9	2.4	1.2	chr1	22372634	22372884	(226583538)	+	AluSx	SINE/Alu	6	259	(53)	40013
12	14.9	0.0	8.7	chr1	22372899	22372918	(226583504)	+	GA-rich	Low_complexity	1	18	(0)	40014
45	8.5	0.0	0.0	chr1	22372919	22372982	(226583440)	+	(GGAAT)n	Simple_repeat	1	64	(0)	40015
12	14.9	0.0	8.7	chr1	22372983	22373007	(226583415)	+	GA-rich	Low_complexity	19	41	(0)	40016
1279	25.4	8.5	4.3	chr1	22373046	22373564	(226582858)	+	MLT1H1	LTR/ERVL-MaLR	1	537	(11)	40017
1162	28.0	10.1	3.1	chr1	22433825	22434930	(226521492)	C	L1ME4b	LINE/L1	(336)	556	4	40157
1445	15.0	0.0	0.0	chr1	23184527	23184746	(225771676)	C	AluJb	SINE/Alu	(91)	221	2	41807
2243	10.3	1.9	0.0	chr1	23345431	23345732	(225610690)	+	AluSq	SINE/Alu	1	308	(5)	42187
1245	26.2	4.5	0.6	chr1	23371595	23371939	(225584483)	C	MamRep4096	DNA/hAT-Tip100	(57)	369	11	42244
24	17.9	1.4	5.6	chr1	24745451	24745520	(224210902)	+	(CAG)n	Simple_repeat	1	71	(0)	45644
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
12	27.7	3.1	3.0	chr1	25859514	25859535	(223096887)	+	(CCGCC)n	Simple_repeat	1	66	(0)	47961
184	23.6	15.4	0.0	chr1	25859934	25859988	(223096434)	+	MIRc	SINE/MIR	34	98	(170)	47962
12	23.3	2.5	0.0	chr1	27575934	27575973	(221380449)	+	G-rich	Low_complexity	1	41	(0)	52050
188	21.2	7.0	0.6	chr1	27576188	27576246	(221380176)	+	MIR3	SINE/MIR	117	177	(85)	52051
231	23.8	5.6	6.7	chr1	27576264	27576353	(221380069)	+	MIR3	SINE/MIR	79	167	(41)	52052
16	17.4	0.0	0.0	chr1	27773082	27773115	(221183307)	+	(CAGCCC)n	Simple_repeat	1	34	(0)	52509
2149	12.8	0.0	2.3	chr1	27919531	27919834	(221036588)	C	AluSz	SINE/Alu	(15)	297	1	52844
278	19.1	0.0	1.6	chr1	28236203	28236266	(220720156)	C	LTR16D1	LTR/ERVL	(484)	191	129	53615
2570	4.2	0.3	0.7	chr1	28329281	28329587	(220626835)	C	AluSp	SINE/Alu	(7)	306	1	53911
2126	8.2	0.7	0.7	chr1	28504856	28505147	(220451275)	+	AluSg4	SINE/Alu	3	294	(16)	54371
236	17.9	5.0	16.7	chr1	28505148	28505195	(220451227)	C	L1MB3	LINE/L1	(61)	6122	6081	54369
17	15.5	0.0	0.0	chr1	28505201	28505231	(220451191)	+	(T)n	Simple_repeat	1	31	(0)	54372
1951	16.0	0.0	2.0	chr1	28659253	28659419	(220297003)	+	AluSz6	SINE/Alu	134	300	(12)	54810
2420	14.3	0.0	1.8	chr1	28659439	28659822	(220296600)	C	HERVL-int	LTR/ERVL	(4074)	1580	1204	54802
1233	19.3	1.7	11.8	chr1	28659851	28660007	(220296415)	+	AluJb	SINE/Alu	5	133	(179)	54812
1984	9.2	10.9	0.0	chr1	28660008	28660278	(220296144)	+	AluSg	SINE/Alu	1	304	(6)	54813
2174	11.0	0.0	2.0	chr1	28730378	28730669	(220225753)	C	AluSg	SINE/Alu	(24)	286	1	55008
372	29.2	0.0	0.0	chr1	28882364	28882459	(220073963)	+	MIRc	SINE/MIR	57	152	(116)	55396
13	20.6	4.0	3.9	chr1	28927641	28927692	(220028730)	+	(TCCC)n	Simple_repeat	1	52	(0)	55531
461	24.1	12.1	2.0	chr1	28927969	28928116	(220028306)	C	LTR104_Mam	LTR/Gypsy	(325)	1184	1020	55532
409	27.2	4.6	0.8	chr1	29136549	29136674	(219819748)	C	L1ME4c	LINE/L1	(320)	510	380	55995
401	5.4	1.8	0.0	chr1	29136927	29136982	(219819440)	+	Alu	SINE/Alu	1	57	(254)	55996
310	25.0	0.0	0.0	chr1	29136983	29137046	(219819376)	C	FLAM_A	SINE/Alu	(75)	67	4	55997
2536	3.0	0.0	0.0	chr1	29137116	29137411	(219819011)	+	AluYc	SINE/Alu	1	296	(3)	55998
17	2.9	0.0	13.0	chr1	29698208	29698253	(219258169)	+	G-rich	Low_complexity	1	46	(0)	57107
17	13.0	7.4	3.5	chr1	29698254	29698259	(219258163)	+	(GCAGG)n	Simple_repeat	3	58	(0)	57108
494	24.5	11.6	2.6	chr1	29736413	29736593	(219219829)	C	MIR3	SINE/MIR	(10)	198	3	57193
3955	16.9	0.6	2.5	chr1	30780319	30781023	(218175399)	+	L1MB3	LINE/L1	5469	6162	(21)	59047
556	11.5	0.0	0.0	chr1	30781027	30781104	(218175318)	+	MSTC	LTR/ERVL-MaLR	1	78	(350)	59049
439	10.0	0.0	12.5	chr1	30781119	30781223	(218175199)	C	AluSx3	SINE/Alu	(0)	311	212	59050
306	13.3	0.0	0.0	chr1	30781237	30781281	(218175141)	C	AluSx	SINE/Alu	(45)	257	213	59051
43	0.0	0.0	0.0	chr1	30781282	30781321	(218175101)	+	(AGTGG)n	Simple_repeat	1	40	(0)	59052
1728	10.6	0.0	0.0	chr1	30781327	30781561	(218174861)	C	AluSx	SINE/Alu	(77)	235	1	59051
247	19.8	1.0	0.4	chr1	30839828	30840325	(218116097)	+	(TGGA)n	Simple_repeat	1	503	(0)	59195
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
856	9.3	0.0	0.0	chr1	31112985	31113091	(217843331)	C	AluYk2	SINE/Alu	(1)	310	204	59840
816	21.2	16.7	1.1	chr1	31152483	31152744	(217803678)	C	MLT1K	LTR/ERVL-MaLR	(281)	314	4	59968
2401	9.1	0.0	0.0	chr1	31152857	31153154	(217803268)	C	AluSc5	SINE/Alu	(11)	298	1	59969
2346	6.7	0.0	2.0	chr1	31925473	31925771	(217030651)	+	AluY	SINE/Alu	1	293	(18)	61632
2066	9.9	5.0	0.7	chr1	31925867	31926150	(217030272)	+	AluSc5	SINE/Alu	4	300	(9)	61633
18	4.5	0.0	0.0	chr1	31926151	31926173	(217030249)	+	(TA)n	Simple_repeat	1	23	(0)	61634
2347	10.2	0.0	0.3	chr1	32122674	32122976	(216833446)	+	AluSp	SINE/Alu	1	302	(11)	62143
401	33.3	0.9	7.0	chr1	32122981	32123222	(216833200)	C	L2	LINE/L2	(662)	2757	2531	62144
756	18.6	8.1	2.0	chr1	32123261	32123457	(216832965)	C	MER106B	DNA/hAT-Charlie	(2)	1057	848	62145
1596	14.1	0.0	1.2	chr1	32143111	32143352	(216813070)	C	AluJb	SINE/Alu	(60)	252	14	62198
2345	7.7	2.9	0.3	chr1	32148558	32148856	(216807566)	C	AluSx3	SINE/Alu	(4)	307	1	62209
748	13.3	1.6	3.1	chr1	32148864	32148991	(216807431)	C	FLAM_C	SINE/Alu	(17)	126	1	62210
4942	19.8	4.7	6.7	chr1	32148992	32149407	(216807015)	C	L1MB4	LINE/L1	(5989)	1528	1140	62200
232	14.6	7.7	2.0	chr1	32163611	32163659	(216792763)	C	Charlie24	DNA/hAT-Charlie	(18)	2432	2381	62242
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
2140	25.5	7.9	17.1	chr1	32395125	32395608	(216560814)	+	L2a	LINE/L2	1636	2052	(1367)	62773
841	12.3	0.0	0.0	chr1	32536452	32536565	(216419857)	C	AluSx3	SINE/Alu	(0)	311	198	63098
555	31.2	17.1	3.2	chr1	32536598	32537393	(216419029)	+	L2a	LINE/L2	2481	3399	(27)	63096
12	15.7	2.6	5.0	chr1	33036893	33036931	(215919491)	+	(ACGC)n	Simple_repeat	1	40	(0)	64297
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
2168	10.9	0.3	0.0	chr1	33037556	33037838	(215918584)	+	AluSq2	SINE/Alu	1	284	(29)	64299
1637	17.0	3.6	2.6	chr1	33070383	33070688	(215885734)	+	AluJo	SINE/Alu	2	310	(2)	64379
431	31.5	3.3	3.3	chr1	33070689	33070768	(215885654)	C	L2b	LINE/L2	(381)	2994	2918	64378
95	9.5	1.1	4.5	chr1	33070773	33070946	(215885476)	+	GA-rich	Low_complexity	1	176	(0)	64380
643	28.8	5.9	7.5	chr1	33070947	33071291	(215885131)	C	L2	LINE/L2	(411)	3008	2670	64381
73	29.2	1.0	4.5	chr1	34136894	34137200	(214819222)	+	(TCCA)n	Simple_repeat	1	310	(0)	66272
1212	11.9	2.8	0.0	chr1	34935353	34935528	(214020894)	C	AluSp	SINE/Alu	(0)	313	133	67699
1045	24.8	7.7	8.0	chr1	34935548	34935697	(214020725)	C	L1M5	LINE/L1	(2530)	3616	3468	67698
2013	14.9	12.2	2.8	chr1	34935698	34936084	(214020338)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	67700
1045	24.8	7.7	8.0	chr1	34936085	34936337	(214020085)	C	L1M5	LINE/L1	(2679)	3467	3206	67698
1176	11.3	0.0	0.0	chr1	35032118	35032310	(213924112)	C	AluSx	SINE/Alu	(0)	312	133	67887
2075	13.9	6.9	0.0	chr1	35058081	35058417	(213898005)	C	L1P1	LINE/L1	(5793)	362	1	67936
2691	9.8	7.9	1.0	chr1	35058419	35058830	(213897592)	+	LTR10F	LTR/ERV1	62	504	(7)	67933
1300	11.5	0.0	1.5	chr1	35058833	35059027	(213897395)	+	MER50	LTR/ERV1	543	734	(0)	67932
1366	24.7	11.5	0.0	chr1	35727136	35727504	(213228918)	C	LTR16A	LTR/ERVL	(2)	449	33	69334
1102	27.2	12.6	3.0	chr1	36166689	36166876	(212789546)	C	L2a	LINE/L2	(597)	2822	2612	70265
488	29.5	2.9	10.0	chr1	36166877	36167480	(212788942)	C	L2-1_AMi	LINE/L2	(985)	1111	92	70270
182	33.3	0.0	0.0	chr1	36385410	36385460	(212570962)	+	MIRb	SINE/MIR	55	105	(163)	70746
14	22.6	2.4	0.0	chr1	36385664	36385705	(212570717)	+	(CCCGCTC)n	Simple_repeat	1	43	(0)	70747
12	26.2	4.0	0.0	chr1	36385706	36385713	(212570709)	+	(CCCGCAC)n	Simple_repeat	1	52	(0)	70748
506	31.2	4.5	1.5	chr1	36842722	36842916	(212113506)	C	MIRb	SINE/MIR	(65)	203	3	71669
269	29.2	10.1	3.6	chr1	36843017	36843183	(212113239)	C	L2	LINE/L2	(539)	2880	2702	71670
595	30.9	3.3	2.3	chr1	36843338	36843574	(212112848)	C	MIRb	SINE/MIR	(19)	249	3	71671
15	12.2	0.0	0.0	chr1	37946464	37946490	(211009932)	+	(TCC)n	Simple_repeat	1	27	(0)	73786
28	3.3	0.0	0.0	chr1	38046632	38046662	(210909760)	+	(CCG)n	Simple_repeat	1	31	(0)	73973
257	19.3	0.0	0.0	chr1	38418460	38418516	(210537906)	+	Charlie15a	DNA/hAT-Charlie	128	184	(40)	74640
14	12.2	0.0	0.0	chr1	38418677	38418703	(210537719)	+	(GATTG)n	Simple_repeat	1	27	(0)	74641
752	31.3	9.6	1.7	chr1	38418704	38419234	(210537188)	C	L2a	LINE/L2	(0)	3426	2844	74642
20	27.3	0.0	1.6	chr1	38859494	38859557	(210096865)	+	(GCCTCC)n	Simple_repeat	1	64	(0)	75454
17	28.2	2.6	2.6	chr1	38859558	38859569	(210096853)	+	(GCC)n	Simple_repeat	1	78	(0)	75455
18	6.5	2.9	2.9	chr1	39105322	39105355	(209851067)	+	(GCC)n	Simple_repeat	1	35	(0)	76100
503	17.4	0.0	1.0	chr1	40373376	40373474	(208582948)	+	MIR	SINE/MIR	164	261	(1)	78693
12	24.3	0.0	8.1	chr1	40373475	40373536	(208582886)	+	(CTTC)n	Simple_repeat	1	62	(0)	78694
13	23.1	1.8	5.3	chr1	40373648	40373703	(208582719)	+	G-rich	Low_complexity	1	57	(0)	78695
801	25.2	7.2	1.1	chr1	40383012	40383454	(208572968)	C	LTR33A	LTR/ERVL	(0)	520	12	78711
1789	17.2	1.7	0.3	chr1	40530585	40530881	(208425541)	C	AluJb	SINE/Alu	(11)	301	1	79001
1355	26.0	6.9	11.9	chr1	40530882	40531159	(208425263)	+	L2	LINE/L2	1799	2041	(1378)	78998
300	29.3	4.3	4.8	chr1	40531160	40531324	(208425098)	+	L2-3_Crp	LINE/L2	844	1007	(1089)	79002
2097	14.9	0.0	2.9	chr1	41437758	41438073	(207518349)	+	AluJo	SINE/Alu	1	307	(5)	80804
301	27.4	9.9	2.3	chr1	41438085	41438215	(207518207)	+	ERVL-E-int	LTR/ERVL	1711	1852	(3815)	80803
3354	31.1	7.2	2.3	chr1	41438229	41440257	(207516165)	+	ERVL-E-int	LTR/ERVL	1882	4063	(1604)	80803
232	25.2	1.2	0.5	chr1	41489496	41490088	(207466334)	+	(CCAT)n	Simple_repeat	1	600	(0)	80908
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
440	25.0	1.9	0.0	chr1	42959265	42959368	(205997054)	+	MIR	SINE/MIR	132	237	(25)	83431
365	29.3	13.5	1.8	chr1	43059079	43059307	(205897115)	+	MIR	SINE/MIR	3	262	(0)	83690
437	27.4	3.7	3.7	chr1	43059308	43059470	(205896952)	+	MIRb	SINE/MIR	76	238	(30)	83691
306	32.4	10.7	2.5	chr1	43201080	43201437	(205754985)	C	L2a	LINE/L2	(1027)	2392	2002	83943
1267	32.1	13.1	2.3	chr1	43522548	43523633	(205432789)	C	L2c	LINE/L2	(154)	3233	2005	84451
1947	12.6	3.2	5.0	chr1	43523765	43524082	(205432340)	+	AluSz6	SINE/Alu	1	312	(0)	84452
975	28.0	4.2	3.4	chr1	43773805	43774224	(205182198)	+	L1MC4	LINE/L1	7351	7649	(393)	84909
12	27.5	4.3	2.8	chr1	44138102	44138170	(204818252)	+	G-rich	Low_complexity	1	72	(0)	85528
17	23.8	3.9	0.0	chr1	44138208	44138258	(204818164)	+	GA-rich	Low_complexity	1	53	(0)	85529
495	24.0	7.4	0.0	chr1	44154101	44154225	(204802197)	C	FLAM_C	SINE/Alu	(8)	135	1	85558
792	25.0	12.6	0.4	chr1	44484198	44484434	(204471988)	C	MLT1J2	LTR/ERVL-MaLR	(178)	270	1	86109
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
24	15.2	0.0	3.6	chr1	44775763	44775817	(204180605)	+	G-rich	Low_complexity	1	55	(0)	86689
17	20.6	4.0	0.0	chr1	45206721	45206770	(203749652)	+	(CGCC)n	Simple_repeat	1	52	(0)	87512
42462	12.0	2.1	2.1	chr1	45753815	45756245	(203200177)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	5174	88694
44	0.0	0.0	0.0	chr1	46202921	46202958	(202753464)	+	(GT)n	Simple_repeat	1	38	(0)	89543
228	26.7	3.2	0.0	chr1	46203085	46203144	(202753278)	C	L2c	LINE/L2	(5)	3370	3309	89544
431	29.3	3.9	2.6	chr1	46246756	46246906	(202709516)	C	MIRb	SINE/MIR	(11)	257	105	89650
307	25.0	19.0	1.5	chr1	47710396	47710525	(201245897)	C	MIRc	SINE/MIR	(104)	164	7	92155
205	37.4	1.5	3.2	chr1	48082318	48082468	(200873954)	C	MIR3	SINE/MIR	(110)	152	4	92876
38	7.0	0.0	0.0	chr1	51237425	51237470	(197718952)	+	(TA)n	Simple_repeat	1	46	(0)	98249
1770	21.6	11.6	3.4	chr1	51621526	51622009	(197334413)	C	L1MC5a	LINE/L1	(217)	2560	2022	99117
670	30.0	14.5	5.2	chr1	51622061	51622405	(197334017)	C	L2b	LINE/L2	(799)	2620	2228	99115
2328	17.3	11.8	4.2	chr1	51622406	51622925	(197333497)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	99119
670	30.0	14.5	5.2	chr1	51622926	51623290	(197333132)	C	L2b	LINE/L2	(1192)	2227	1833	99115
235	30.7	14.7	2.5	chr1	52145485	52145681	(196810741)	+	MIRb	SINE/MIR	30	254	(14)	100284
973	30.3	18.7	1.3	chr1	52243843	52244598	(196711824)	C	L2b	LINE/L2	(1108)	2311	1394	100455
237	29.7	4.5	0.0	chr1	52404996	52405059	(196551363)	C	L2a	LINE/L2	(6)	3369	3303	100772
231	30.0	7.7	4.8	chr1	53196121	53196246	(195760176)	+	L3	LINE/CR1	3950	4079	(20)	102641
266	33.2	14.0	4.5	chr1	53196369	53196567	(195759855)	C	MIRb	SINE/MIR	(9)	259	39	102642
584	33.6	12.2	5.4	chr1	54082567	54083543	(194872879)	C	L2b	LINE/L2	(345)	3074	2023	104377
13	22.4	0.0	4.4	chr1	54488682	54488726	(194467696)	+	G-rich	Low_complexity	1	45	(0)	105195
3154	8.0	2.9	2.0	chr1	54922249	54922696	(194033726)	C	L1PA13	LINE/L1	(2)	6161	5710	106159
277	29.3	1.7	0.0	chr1	55429009	55429089	(193527333)	+	MIRc	SINE/MIR	37	122	(86)	107098
390	29.2	4.2	5.6	chr1	55429545	55429719	(193526703)	+	MIRc	SINE/MIR	3	179	(89)	107099
1227	28.5	5.3	4.6	chr1	55726058	55726548	(193229874)	C	L2	LINE/L2	(951)	2468	1968	107640
256	34.5	4.0	1.6	chr1	55726771	55726891	(193229531)	+	LTR33A	LTR/ERVL	190	313	(207)	107642
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
1825	20.8	5.5	7.0	chr1	56676127	56676639	(192279783)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	109311
349	28.4	17.1	0.0	chr1	56676790	56676930	(192279492)	C	Charlie29a	DNA/hAT-Charlie	(285)	434	265	109310
333	24.0	0.0	12.7	chr1	56676969	56677078	(192279344)	C	Charlie29a	DNA/hAT-Charlie	(545)	174	79	109310
43327	6.8	0.4	1.5	chr1	57557525	57562090	(191394332)	+	HERVL-int	LTR/ERVL	2	4519	(1135)	111074
640	29.9	7.6	5.9	chr1	59364524	59364793	(189591629)	C	L2c	LINE/L2	(0)	3387	3113	114747
269	10.0	0.0	0.0	chr1	59364815	59364854	(189591568)	+	MLT2B4	LTR/ERVL	517	556	(0)	114748
280	32.9	12.7	3.4	chr1	59364907	59365347	(189591075)	C	L2c	LINE/L2	(809)	2610	2123	114747
259	32.2	6.9	5.5	chr1	59946992	59947119	(189009303)	C	MIR3	SINE/MIR	(73)	135	6	115687
24	16.6	0.0	0.0	chr1	61057018	61057070	(187899352)	+	(CA)n	Simple_repeat	1	53	(0)	117597
19	0.0	0.0	0.0	chr1	62783687	62783707	(186172715)	+	(T)n	Simple_repeat	1	21	(0)	120815
213	29.6	3.5	1.8	chr1	63172129	63172202	(185784220)	+	MIR3	SINE/MIR	9	89	(141)	121525
30	28.7	1.9	0.9	chr1	63172666	63172770	(185783652)	+	A-rich	Low_complexity	1	107	(0)	121526
455	27.9	11.3	1.0	chr1	64086788	64086993	(184869429)	C	MIRb	SINE/MIR	(5)	263	34	123277
985	32.5	5.6	4.3	chr1	64225264	64225825	(184730597)	C	L2	LINE/L2	(361)	3058	2489	123508
2710	20.1	2.9	3.3	chr1	64225832	64226532	(184729890)	+	L1ME2	LINE/L1	5465	6162	(2)	123509
21	18.1	0.0	8.2	chr1	64966524	64966596	(183989826)	+	(CCGCC)n	Simple_repeat	1	73	(0)	124796
1890	15.6	0.0	4.6	chr1	65114166	65114346	(183842076)	+	AluJb	SINE/Alu	134	312	(0)	125129
892	28.7	9.4	3.0	chr1	65118639	65119004	(183837418)	+	L2a	LINE/L2	3031	3422	(4)	125140
239	37.4	0.0	0.0	chr1	65119017	65119131	(183837291)	C	L2a	LINE/L2	(1417)	2002	1888	125134
268	32.1	14.8	4.0	chr1	65119414	65119522	(183836900)	C	MIRb	SINE/MIR	(9)	259	123	125141
568	21.4	3.8	0.0	chr1	65147117	65147242	(183809180)	+	L2a	LINE/L2	3296	3426	(0)	125209
180	24.5	2.0	2.0	chr1	65147285	65147334	(183809088)	+	MIRb	SINE/MIR	208	257	(11)	125210
17	7.9	0.0	0.0	chr1	65147483	65147509	(183808913)	+	(GGAGT)n	Simple_repeat	1	27	(0)	125211
1049	17.2	0.0	0.0	chr1	65165418	65165580	(183790842)	+	FAM	SINE/Alu	17	179	(6)	125251
1054	23.4	3.2	14.0	chr1	65447107	65447358	(183509064)	C	L1MD	LINE/L1	(1005)	5141	4904	125813
7904	12.3	1.6	3.3	chr1	65447353	65447523	(183508899)	C	L1MCa	LINE/L1	(1603)	4718	4556	125815
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
226	18.8	12.5	0.0	chr1	67466090	67466138	(181490284)	C	MIRb	SINE/MIR	(9)	259	200	128896
1709	15.3	0.4	0.4	chr1	67466554	67466808	(181489614)	+	AluSz	SINE/Alu	1	255	(57)	128897
717	31.9	10.1	2.5	chr1	67653203	67653516	(181302906)	+	L2	LINE/L2	1395	1739	(1680)	129351
2046	27.6	25.7	2.1	chr1	68432186	68434091	(180522331)	C	L2a	LINE/L2	(9)	3417	875	130651
26289	2.6	0.1	0.1	chr1	68875778	68881805	(180074617)	C	L1PA2	LINE/L1	(0)	6155	127	131255
2441	16.4	1.3	0.4	chr1	68881808	68882267	(180074155)	+	Tigger1	DNA/TcMar-Tigger	1953	2416	(2)	131256
26591	4.3	0.4	0.3	chr1	69922814	69928952	(179027470)	C	L1PA3	LINE/L1	(3)	6152	9	132641
792	11.1	6.5	28.9	chr1	73183398	73183570	(175772852)	+	LTR10F	LTR/ERV1	89	260	(251)	137087
338	2.1	0.0	0.0	chr1	73183571	73183617	(175772805)	+	LTR10F	LTR/ERV1	113	159	(352)	137089
489	14.4	6.7	7.3	chr1	73183618	73183767	(175772655)	+	LTR10F	LTR/ERV1	104	252	(259)	137090
314	6.5	0.0	0.0	chr1	73183768	73183813	(175772609)	+	LTR10F	LTR/ERV1	114	159	(352)	137089
2643	8.0	5.2	1.0	chr1	73183814	73184204	(175772218)	+	LTR10F	LTR/ERV1	104	511	(0)	137091
954	36.0	3.6	1.5	chr1	74272163	74272695	(174683727)	C	L2a	LINE/L2	(9)	3417	2867	138432
339	33.2	4.3	2.9	chr1	74272721	74272928	(174683494)	C	MIRb	SINE/MIR	(44)	224	14	138433
21	17.6	2.3	0.0	chr1	75297942	75297985	(173658437)	+	A-rich	Low_complexity	1	45	(0)	139759
366	29.4	6.7	4.9	chr1	76140474	76140602	(172815820)	+	L2c	LINE/L2	3180	3310	(77)	140999
626	31.2	8.8	7.9	chr1	77169900	77170652	(171785770)	+	L2a	LINE/L2	2596	3425	(1)	142461
2389	12.1	7.0	2.5	chr1	77224742	77225139	(171731283)	C	MSTA	LTR/ERVL-MaLR	(0)	428	12	142532
323	26.9	2.1	0.0	chr1	77587147	77587239	(171369183)	+	L1MC5a	LINE/L1	2679	2773	(4)	143143
2562	6.2	0.0	0.7	chr1	77587259	77587563	(171368859)	C	AluY	SINE/Alu	(8)	303	1	143144
324	20.3	0.0	7.8	chr1	80054033	80054080	(168902342)	+	HERVL18-int	LTR/ERVL	5224	5267	(780)	146672
250	17.8	0.0	0.0	chr1	80054081	80054125	(168902297)	+	HERVL18-int	LTR/ERVL	5946	5990	(57)	146672
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
331	27.4	6.5	8.6	chr1	81193359	81193544	(167762878)	+	MLT1O	LTR/ERVL-MaLR	41	200	(342)	148124
1201	28.5	16.1	5.6	chr1	81359606	81360347	(167596075)	+	L2a	LINE/L2	2332	3164	(262)	148345
2268	9.4	0.0	0.0	chr1	84620194	84620511	(164335911)	C	AluSc	SINE/Alu	(0)	309	1	152804
12	16.9	0.0	0.0	chr1	84620578	84620604	(164335818)	+	(CTTC)n	Simple_repeat	1	27	(0)	152805
18	19.6	0.0	4.0	chr1	84621094	84621143	(164335279)	+	G-rich	Low_complexity	1	50	(0)	152806
2631	6.2	0.0	0.0	chr1	85197645	85197953	(163758469)	C	AluY	SINE/Alu	(2)	309	1	153781
256	31.1	4.7	14.1	chr1	85198139	85198351	(163758071)	+	MIRb	SINE/MIR	29	220	(48)	153782
309	24.2	13.9	5.8	chr1	85275153	85275323	(163681099)	+	L2a	LINE/L2	3234	3420	(6)	153915
18	24.0	3.6	1.7	chr1	86157579	86157634	(162798788)	+	(CA)n	Simple_repeat	1	58	(0)	155216
792	17.6	6.7	1.1	chr1	86771217	86771400	(162185022)	C	Charlie2a	DNA/hAT-Charlie	(1199)	1662	1468	156071
51	4.7	1.5	1.4	chr1	86771444	86771511	(162184911)	+	(GATG)n	Simple_repeat	1	69	(0)	156072
636	25.0	13.3	1.5	chr1	86771624	86771895	(162184527)	C	Charlie2a	DNA/hAT-Charlie	(2552)	309	1	156073
5386	22.2	12.5	4.0	chr1	86922447	86923222	(162033200)	C	L1MEc	LINE/L1	(4565)	1835	992	156345
1838	12.8	9.9	5.2	chr1	86923223	86923398	(162033024)	C	THE1B	LTR/ERVL-MaLR	(0)	364	178	156348
2486	8.1	0.0	0.0	chr1	86923399	86923694	(162032728)	C	AluY	SINE/Alu	(14)	297	2	156349
397	24.8	8.5	1.5	chr1	88016005	88016135	(160940287)	C	L1ME4a	LINE/L1	(478)	5646	5506	157927
364	25.9	0.0	2.3	chr1	88016598	88016684	(160939738)	C	Charlie24	DNA/hAT-Charlie	(0)	2450	2366	157929
423	30.5	6.9	9.1	chr1	88076078	88076286	(160880136)	C	L2a	LINE/L2	(0)	3426	3184	157992
892	34.2	3.6	2.0	chr1	88076414	88076822	(160879600)	C	L2a	LINE/L2	(487)	2932	2517	157992
226	27.0	15.5	5.2	chr1	88076901	88077072	(160879350)	+	Tigger15a	DNA/TcMar-Tigger	23	215	(500)	157993
45372	6.7	0.9	0.4	chr1	88898894	88904109	(160052313)	+	HERVL-int	LTR/ERVL	426	5654	(0)	159188
2335	18.6	12.3	3.9	chr1	90596016	90596634	(158359788)	+	L1MEc	LINE/L1	759	1439	(4961)	161502
2417	9.1	0.0	0.7	chr1	90596635	90596932	(158359490)	+	AluY	SINE/Alu	1	296	(15)	161503
12	14.4	6.2	0.0	chr1	90721146	90721177	(158235245)	+	GA-rich	Low_complexity	1	34	(0)	161682
304	27.7	7.9	7.8	chr1	91166558	91166807	(157789615)	C	MLT1L	LTR/ERVL-MaLR	(52)	543	322	162372
1514	28.4	11.5	3.0	chr1	91894032	91894785	(157061637)	+	L2a	LINE/L2	1437	2271	(1148)	163428
2346	7.8	0.0	0.0	chr1	91894786	91895068	(157061354)	C	AluSc8	SINE/Alu	(27)	284	2	163429
367	27.8	10.1	8.3	chr1	92188162	92188365	(156768057)	C	L2c	LINE/L2	(3)	3384	3177	164033
358	31.4	15.3	2.2	chr1	92188517	92188884	(156767538)	C	L2c	LINE/L2	(582)	2837	2413	164033
230	32.3	4.0	2.9	chr1	93080207	93080343	(155876079)	C	MIRc	SINE/MIR	(69)	199	54	165675
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
1768	18.6	0.0	1.7	chr1	93255449	93255738	(155700684)	+	AluJb	SINE/Alu	1	285	(27)	165993
53	1.9	0.0	0.0	chr1	93255740	93255792	(155700630)	+	(GAAGAAGAG)n	Simple_repeat	1	53	(0)	165994
5656	16.4	10.2	27.4	chr1	93433545	93435716	(155520706)	C	MER52A	LTR/ERV1	(0)	1755	1	166296
2342	10.2	0.0	0.0	chr1	93446239	93446533	(155509889)	+	AluSq2	SINE/Alu	2	296	(17)	166314
469	30.5	11.9	5.2	chr1	93672878	93673258	(155283164)	+	L2a	LINE/L2	2918	3327	(99)	166654
81	35.3	1.6	0.3	chr1	94674885	94675199	(154281223)	+	(GGAT)n	Simple_repeat	1	320	(0)	168120
284	31.8	10.3	13.8	chr1	95039022	95039272	(153917150)	C	L2c	LINE/L2	(226)	3161	2922	168736
2407	7.9	0.3	1.3	chr1	95236045	95236347	(153720075)	+	AluSq2	SINE/Alu	1	300	(13)	169066
285	37.6	6.6	4.2	chr1	95236348	95236450	(153719972)	C	Tigger19a	DNA/TcMar-Tigger	(212)	111	2	169065
12	22.4	4.8	0.0	chr1	95236453	95236494	(153719928)	+	(CATT)n	Simple_repeat	1	44	(0)	169067
22	23.8	1.9	0.0	chr1	95288470	95288523	(153667899)	+	(TG)n	Simple_repeat	1	55	(0)	169142
272	28.9	5.7	0.0	chr1	95288552	95288634	(153667788)	C	MIR3	SINE/MIR	(21)	187	100	169143
281	25.3	4.2	1.1	chr1	95288634	95288725	(153667697)	+	L2c	LINE/L2	2002	2096	(1323)	169144
936	17.2	3.4	8.5	chr1	95288871	95289118	(153667304)	C	MER106A	DNA/hAT-Charlie	(1)	235	1	169145
432	36.6	7.4	1.7	chr1	98632455	98632812	(150323610)	C	L2	LINE/L2	(954)	2465	2086	173716
258	24.6	19.8	4.2	chr1	99761885	99762028	(149194394)	C	MIRb	SINE/MIR	(6)	262	91	175315
320	31.5	10.4	2.0	chr1	100341852	100341983	(148614439)	C	L2	LINE/L2	(691)	2728	2571	176426
2247	13.3	0.7	0.0	chr1	100341984	100342277	(148614145)	C	AluSz	SINE/Alu	(16)	296	1	176427
456	23.9	3.4	1.7	chr1	100361470	100361584	(148594838)	+	L2b	LINE/L2	3259	3375	(0)	176460
270	29.4	11.2	0.0	chr1	100362142	100362260	(148594162)	+	Plat_L3	LINE/CR1	3440	3573	(13)	176461
387	19.7	14.3	0.0	chr1	100604616	100604747	(148351675)	C	L2a	LINE/L2	(1890)	1529	1376	176809
687	8.2	3.5	2.6	chr1	101019350	101019462	(147936960)	+	L1MB3	LINE/L1	6058	6171	(12)	177361
27016	3.3	0.2	0.0	chr1	104658854	104664872	(144291550)	C	L1PA3	LINE/L1	(0)	6155	124	181932
15	13.9	0.0	0.0	chr1	104665063	104665086	(144291336)	+	(T)n	Simple_repeat	1	24	(0)	181933
202	28.6	9.1	0.0	chr1	107630219	107630316	(141326106)	+	L2a	LINE/L2	3265	3426	(0)	185714
37	0.0	2.4	2.3	chr1	107630339	107630380	(141326042)	+	(ATGG)n	Simple_repeat	1	43	(0)	185715
329	25.8	6.5	3.2	chr1	107630443	107630548	(141325874)	C	MIRc	SINE/MIR	(105)	163	49	185716
411	26.3	9.0	3.7	chr1	107693847	107694152	(141262270)	+	MLT1J2	LTR/ERVL-MaLR	66	396	(15)	185787
276	33.3	9.8	1.5	chr1	107920998	107921128	(141035294)	+	L2	LINE/L2	2718	2860	(559)	186078
365	28.2	5.6	3.5	chr1	108094918	108095145	(140861277)	+	L1ME4b	LINE/L1	445	677	(215)	186349
340	29.1	2.2	11.8	chr1	108095506	108095708	(140860714)	+	L2b	LINE/L2	3093	3275	(100)	186345
2278	26.8	8.4	1.9	chr1	109440562	109441619	(139514803)	+	L2a	LINE/L2	2205	3350	(76)	188586
396	26.3	6.2	2.1	chr1	109655549	109655688	(139300734)	C	MamRep605	LTR?	(253)	596	451	188912
1951	20.1	13.1	3.6	chr1	109797880	109798410	(139158012)	C	MLT1G	LTR/ERVL-MaLR	(2)	589	1	189098
259	33.0	2.6	1.8	chr1	109798411	109798507	(139157915)	C	MLT1I	LTR/ERVL-MaLR	(251)	160	64	189097
69	1.2	0.0	0.0	chr1	110080042	110080122	(138876300)	+	(TCTAT)n	Simple_repeat	1	81	(0)	189509
94	2.6	5.8	0.0	chr1	110080123	110080242	(138876180)	+	(CCATTC)n	Simple_repeat	1	127	(0)	189510
2061	11.1	0.7	0.0	chr1	110080244	110080522	(138875900)	C	AluSz	SINE/Alu	(31)	281	1	189511
1742	26.1	11.1	2.9	chr1	110138176	110138976	(138817446)	C	L1ME4b	LINE/L1	(13)	879	5	189615
454	23.2	19.9	2.1	chr1	110138995	110139183	(138817239)	C	L2a	LINE/L2	(3)	3423	3193	189616
279	25.0	9.4	6.5	chr1	110461337	110461460	(138494962)	+	MamRep1879	DNA/hAT-Tip100?	70	197	(19)	190192
12	4.7	4.5	0.0	chr1	111619749	111619770	(137336652)	+	(GCGT)n	Simple_repeat	1	23	(0)	191803
22	24.0	0.0	0.0	chr1	111619785	111619838	(137336584)	+	(CGC)n	Simple_repeat	1	54	(0)	191804
43	2.3	0.0	0.0	chr1	111619876	111619919	(137336503)	+	(GGAGGAGGT)n	Simple_repeat	1	44	(0)	191805
354	28.9	7.7	6.2	chr1	111739965	111740156	(137216266)	C	L2a	LINE/L2	(26)	3400	3206	191993
14	26.4	4.6	1.5	chr1	111989950	111990014	(136966408)	+	G-rich	Low_complexity	1	68	(0)	192419
184	13.9	10.0	1.4	chr1	112369432	112369504	(136586918)	C	MIRc	SINE/MIR	(2)	266	187	192974
383	26.9	9.9	0.0	chr1	112465988	112466132	(136490290)	+	MIRb	SINE/MIR	89	249	(19)	193160
216	25.9	10.4	1.8	chr1	112466539	112466652	(136489770)	+	MIR	SINE/MIR	144	268	(0)	193161
2252	11.0	0.0	0.3	chr1	112902701	112903000	(136053422)	C	AluSx	SINE/Alu	(13)	299	1	194020
1425	21.8	2.2	8.8	chr1	112903001	112903197	(136053225)	+	MER21C	LTR/ERVL	748	933	(5)	194019
21183	13.1	2.7	5.2	chr1	113314356	113315340	(135641082)	+	L1M1	LINE/L1	3268	4128	(3437)	194841
277	27.9	3.4	1.1	chr1	113389729	113389860	(135566562)	C	MIRc	SINE/MIR	(47)	161	30	194967
185	21.6	2.6	0.0	chr1	113389863	113389899	(135566523)	+	L2b	LINE/L2	3338	3375	(0)	194975
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
365	25.2	9.2	0.0	chr1	113799613	113799751	(135156671)	+	L1ME4a	LINE/L1	5967	6119	(5)	195533
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
299	23.5	2.3	1.2	chr1	114509254	114509339	(134447083)	+	MER46C	DNA/TcMar-Tigger	1	87	(251)	196722
320	25.1	14.9	8.1	chr1	114509355	114509540	(134446882)	+	MER46C	DNA/TcMar-Tigger	134	334	(4)	196723
4419	15.8	2.6	0.5	chr1	115147580	115147818	(133808604)	+	L1PB4	LINE/L1	5782	6034	(122)	197765
28319	4.9	0.4	0.3	chr1	115147822	115153959	(133802463)	+	L1PA2	LINE/L1	136	6280	(23)	197767
737	13.1	11.5	0.0	chr1	115259490	115259656	(133696766)	+	L1PA10	LINE/L1	5987	6168	(0)	197931
233	27.4	7.4	2.6	chr1	115259884	115259999	(133696423)	+	CR1-3_Croc	LINE/CR1	1848	1969	(1636)	197932
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
407	30.3	5.3	4.2	chr1	118185498	118185738	(130770684)	C	L3	LINE/CR1	(71)	4028	3785	202420
220	25.3	18.6	0.0	chr1	118185907	118185985	(130770437)	C	MIRb	SINE/MIR	(0)	262	166	202421
215	26.8	16.4	5.9	chr1	119744495	119744613	(129211809)	C	L2b	LINE/L2	(8)	3367	3234	204475
30	4.8	5.7	4.0	chr1	125151026	125151095	(123805327)	+	(GATTCCATTC)n	Simple_repeat	1	74	(0)	207451
28	5.0	5.9	4.2	chr1	143539689	143539756	(105416666)	+	(GATTCCATTC)n	Simple_repeat	1	72	(0)	207963
41	4.5	8.2	2.8	chr1	143539826	143539923	(105416499)	+	(GATTCCATTC)n	Simple_repeat	1	106	(0)	207964
299	29.6	4.3	4.3	chr1	143721075	143721212	(105235210)	C	Charlie4a	DNA/hAT-Charlie	(8)	500	363	208225
471	20.4	2.7	3.6	chr1	143721385	143721496	(105234926)	C	LTR56	LTR/ERV1	(326)	119	9	208226
965	5.7	0.0	2.5	chr1	143721498	143721619	(105234803)	+	AluSx	SINE/Alu	2	120	(192)	208227
701	1.3	0.0	0.0	chr1	144419267	144419341	(104537081)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	209379
691	0.0	0.0	0.0	chr1	145287766	145287841	(103668581)	+	tRNA-Asn-AAC	tRNA	1	76	(1)	210782
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
13	19.2	6.1	1.9	chr1	145859802	145859850	(103096572)	+	(GGCTCG)n	Simple_repeat	1	52	(0)	211658
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
2300	8.2	0.0	0.0	chr1	147173021	147173299	(101783123)	+	AluSc	SINE/Alu	1	279	(30)	213748
390	35.4	7.5	8.5	chr1	147869058	147869492	(101086930)	C	L2b	LINE/L2	(8)	3367	2938	214763
1488	23.1	19.6	8.0	chr1	147869500	147869995	(101086427)	+	MLT1F2	LTR/ERVL-MaLR	5	557	(3)	214764
368	31.5	0.7	0.7	chr1	148402185	148402328	(100554094)	+	Charlie4a	DNA/hAT-Charlie	362	505	(3)	215661
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
374	31.5	0.7	0.7	chr1	149636221	149636364	(99320058)	+	Charlie4a	DNA/hAT-Charlie	362	505	(3)	217500
2408	9.7	0.3	0.0	chr1	149939648	149939957	(99016465)	+	AluSx1	SINE/Alu	1	311	(1)	218016
24	3.5	0.0	0.0	chr1	150009942	150009970	(98946452)	+	(CA)n	Simple_repeat	1	29	(0)	218140
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
2239	11.0	0.3	2.5	chr1	151251285	151251466	(97704956)	+	AluSx1	SINE/Alu	137	312	(0)	220811
21	7.9	4.8	2.3	chr1	151251514	151251555	(97704867)	+	(TTTC)n	Simple_repeat	1	44	(0)	220813
935	12.1	0.8	0.0	chr1	151251556	151251687	(97704735)	C	AluSz	SINE/Alu	(179)	133	1	220814
265	20.8	21.3	0.0	chr1	151735037	151735132	(97221290)	+	MIR	SINE/MIR	64	185	(77)	221822
1912	14.7	3.7	0.0	chr1	151735461	151735745	(97220677)	C	AluSz	SINE/Alu	(12)	300	5	221823
12	13.9	11.9	3.0	chr1	152048316	152048374	(96908048)	+	(GGCTGT)n	Simple_repeat	1	66	(0)	222321
449	31.2	6.9	5.0	chr1	152053960	152054643	(96901779)	C	L1M5	LINE/L1	(1310)	4836	4136	222331
228	33.3	8.9	3.8	chr1	152870070	152870228	(96086194)	+	MIRc	SINE/MIR	81	248	(20)	223327
931	24.6	8.8	8.3	chr1	153584913	153585109	(95371313)	+	L1MEd	LINE/L1	4028	4191	(1955)	224331
362	29.6	9.4	0.7	chr1	153585145	153585290	(95371132)	+	L1MEh	LINE/L1	371	530	(1705)	224336
17	8.9	0.0	0.0	chr1	153585293	153585316	(95371106)	+	(T)n	Simple_repeat	1	24	(0)	224337
589	32.2	13.8	5.4	chr1	154353219	154354243	(94602179)	+	L2	LINE/L2	1431	2555	(864)	225966
349	26.8	16.7	6.3	chr1	154436157	154436208	(94520214)	C	MLT1H1	LTR/ERVL-MaLR	(5)	550	507	226175
2008	9.2	4.8	0.4	chr1	154436209	154436489	(94519933)	+	AluSq2	SINE/Alu	1	294	(19)	226176
13	8.7	4.0	0.0	chr1	154502729	154502753	(94453669)	+	(CCACT)n	Simple_repeat	1	26	(0)	226305
1059	17.2	10.6	0.4	chr1	154534031	154534264	(94422158)	+	MER58B	DNA/hAT-Charlie	79	340	(1)	226383
273	21.3	0.9	2.6	chr1	154534311	154534410	(94422012)	+	L1ME3G	LINE/L1	21	88	(836)	226384
992	19.9	12.7	4.0	chr1	154534419	154534747	(94421675)	C	L1M4a2	LINE/L1	(2260)	396	35	226385
321	6.4	8.1	1.1	chr1	154713961	154714648	(94241774)	+	(GT)n	Simple_repeat	1	744	(0)	226654
1649	25.3	4.1	4.4	chr1	154851437	154852028	(94104394)	+	L2a	LINE/L2	2418	3007	(412)	226890
1687	19.3	1.8	2.8	chr1	154852143	154852207	(94104215)	+	Charlie5	DNA/hAT-Charlie	2235	2299	(325)	226891
20	22.8	1.8	0.0	chr1	155208685	155208740	(93747682)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	227541
12	21.8	2.7	0.0	chr1	155209171	155209207	(93747215)	+	G-rich	Low_complexity	1	38	(0)	227542
554	14.9	0.0	0.0	chr1	155226863	155226965	(93729457)	C	FLAM_C	SINE/Alu	(90)	212	38	227580
232	37.5	10.9	1.3	chr1	155276386	155276782	(93679640)	C	L2c	LINE/L2	(340)	3079	2640	227656
18	3.8	0.0	3.5	chr1	155276868	155276896	(93679526)	+	(TTTGT)n	Simple_repeat	1	29	(0)	227658
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
3588	12.3	2.6	2.0	chr1	155691833	155692373	(93264049)	C	LTR14	LTR/ERVK	(4)	544	1	228566
21938	18.5	6.2	5.6	chr1	155692376	155693679	(93262743)	C	HERVKC4-int	LTR/ERVK	(6)	5256	3950	228566
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
221	31.6	7.3	2.6	chr1	156291138	156291254	(92665168)	+	MIR	SINE/MIR	136	258	(4)	229861
235	35.6	5.2	0.0	chr1	156337638	156337783	(92618639)	C	MIRb	SINE/MIR	(31)	237	84	229967
15	5.5	0.0	0.0	chr1	156337793	156337811	(92618611)	+	(A)n	Simple_repeat	1	19	(0)	229968
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
196	31.4	6.4	8.9	chr1	156444433	156444544	(92511878)	C	L2a	LINE/L2	(1884)	1535	1427	230130
17	18.7	0.0	4.3	chr1	156444648	156444693	(92511729)	+	(TTCA)n	Simple_repeat	1	46	(0)	230143
417	24.8	1.3	12.3	chr1	156571885	156572063	(92384359)	+	MER5A	DNA/hAT-Charlie	1	159	(30)	230360
326	34.8	11.4	1.4	chr1	156572876	156573482	(92382940)	C	L2c	LINE/L2	(41)	3346	2686	230361
189	32.9	2.7	1.4	chr1	156741566	156741639	(92214783)	C	L3	LINE/CR1	(0)	4099	4025	230666
12	18.8	2.6	2.6	chr1	156920241	156920278	(92036144)	+	(CCCCAGC)n	Simple_repeat	1	39	(0)	230987
13	21.9	1.9	5.6	chr1	159945550	159945602	(89010820)	+	(CTCCG)n	Simple_repeat	1	54	(0)	234978
497	33.0	12.7	5.9	chr1	160132132	160132943	(88823479)	C	L2	LINE/L2	(372)	3047	2173	235288
322	34.3	11.3	0.6	chr1	160132960	160133132	(88823290)	C	MIRb	SINE/MIR	(74)	194	1	235289
367	29.0	3.3	2.4	chr1	160133142	160133353	(88823069)	C	L2-3_Crp	LINE/L2	(1124)	972	759	235290
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
20	0.0	0.0	0.0	chr1	161225920	161225941	(87730481)	+	(T)n	Simple_repeat	1	22	(0)	237108
2225	6.4	0.7	2.7	chr1	161389205	161389500	(87566922)	+	AluSp	SINE/Alu	9	298	(15)	237439
232	30.4	4.7	4.7	chr1	161389531	161389637	(87566785)	C	MER103C	DNA/hAT-Charlie	(123)	174	68	237440
13	17.2	4.9	2.3	chr1	161389847	161389887	(87566535)	+	(CTCCG)n	Simple_repeat	1	43	(0)	237441
22869	11.4	1.6	1.2	chr1	162099629	162106422	(86850000)	C	L1PA4	LINE/L1	(0)	7590	16	238600
17	16.9	0.0	0.0	chr1	164749665	164749698	(84206724)	+	(GGAT)n	Simple_repeat	1	34	(0)	242585
1573	14.7	1.6	2.5	chr1	164749876	164750120	(84206302)	+	AluJo	SINE/Alu	60	302	(10)	242586
1186	26.6	5.3	4.6	chr1	165057294	165057726	(83898696)	+	MLT1J1	LTR/ERVL-MaLR	9	444	(0)	243047
190	33.3	1.5	0.0	chr1	167553987	167554052	(81402370)	C	MIRc	SINE/MIR	(124)	144	78	246883
617	20.9	4.3	3.5	chr1	167554207	167554397	(81402025)	C	PrimLTR79	LTR/ERV1	(9)	610	360	246884
844	24.2	5.5	7.6	chr1	167699240	167699699	(81256723)	C	MLT1C	LTR/ERVL-MaLR	(20)	485	34	247155
702	35.4	6.4	3.1	chr1	167699704	167700123	(81256299)	+	L2b	LINE/L2	2941	3375	(0)	247156
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
1672	17.8	2.1	1.4	chr1	167820658	167820944	(81135478)	+	AluJb	SINE/Alu	2	290	(22)	247368
4884	13.3	5.2	5.4	chr1	167863573	167864915	(81091507)	+	Harlequin-int	LTR/ERV1	1	1349	(5547)	247451
276	21.7	17.0	3.0	chr1	168179549	168179695	(80776727)	C	L2c	LINE/L2	(38)	3349	3196	247956
512	32.3	15.3	3.6	chr1	168179861	168180632	(80775790)	C	L2c	LINE/L2	(359)	3060	2183	247956
1148	13.7	0.0	0.0	chr1	168225441	168225608	(80730814)	C	AluJo	SINE/Alu	(11)	301	134	248046
852	17.9	8.2	0.0	chr1	168863222	168863366	(80093056)	+	FAM	SINE/Alu	1	158	(27)	249056
442	27.5	13.0	1.8	chr1	168863489	168863651	(80092771)	C	MIR3	SINE/MIR	(9)	199	16	249057
13	5.3	0.0	0.0	chr1	169367760	169367779	(79588643)	+	(CAC)n	Simple_repeat	1	20	(0)	249846
242	25.5	4.7	12.5	chr1	170167246	170167429	(78788993)	C	MIRc	SINE/MIR	(88)	180	12	250953
1558	16.5	5.3	1.1	chr1	171780612	171780883	(77175539)	+	AluJb	SINE/Alu	7	290	(22)	253321
14	28.5	3.1	1.5	chr1	171841146	171841210	(77115212)	+	(GGTGCT)n	Simple_repeat	1	67	(0)	253434
18	12.1	0.0	5.0	chr1	171841403	171841442	(77114980)	+	G-rich	Low_complexity	1	40	(0)	253435
43	0.0	0.0	0.0	chr1	172359126	172359162	(76597260)	+	(AC)n	Simple_repeat	1	37	(0)	254131
19	9.5	2.9	0.0	chr1	172541890	172541923	(76414499)	+	(TTGT)n	Simple_repeat	1	35	(0)	254370
214	30.1	14.8	0.6	chr1	172541924	172542097	(76414325)	C	L2b	LINE/L2	(866)	2553	2351	254369
2447	7.6	0.3	1.0	chr1	172542099	172542399	(76414023)	+	AluSp	SINE/Alu	2	300	(13)	254371
2168	23.9	7.9	1.1	chr1	172653016	172653535	(76302887)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	1	254518
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
1675	15.8	2.5	2.5	chr1	175180873	175181151	(73775271)	C	AluJr4	SINE/Alu	(33)	279	1	258339
44874	6.9	1.5	0.1	chr1	175242967	175248539	(73707883)	+	HERVL-int	LTR/ERVL	1	5654	(0)	258439
14	14.2	3.2	0.0	chr1	178093445	178093475	(70862947)	+	A-rich	Low_complexity	1	32	(0)	262568
3934	14.5	5.8	2.0	chr1	178107457	178108274	(70848148)	C	L1MB4	LINE/L1	(0)	6180	5330	262588
185	28.3	18.4	0.0	chr1	179016979	179017098	(69939324)	+	L2c	LINE/L2	3220	3366	(9)	264006
20	0.0	0.0	0.0	chr1	179586177	179586198	(69370224)	+	(A)n	Simple_repeat	1	22	(0)	265038
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
1858	5.5	5.0	17.4	chr1	182838488	182838831	(66117591)	C	AluSx1	SINE/Alu	(13)	299	1	270131
310	30.6	0.0	1.2	chr1	182838895	182838980	(66117442)	C	MIRb	SINE/MIR	(19)	249	165	270132
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
875	24.7	16.3	4.9	chr1	185248910	185249416	(63707006)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	4	273970
2177	21.4	9.8	3.8	chr1	185249463	185250121	(63706301)	C	MLT1G1-int	LTR/ERVL-MaLR	(68)	1421	719	273970
3182	28.8	5.0	2.4	chr1	190898586	190900914	(58055508)	+	L1M3b	LINE/L1	1220	3319	(4247)	281480
2806	23.1	4.9	6.3	chr1	192065908	192066290	(56890132)	+	Charlie10	DNA/hAT-Charlie	1818	2204	(618)	282921
28	0.0	0.0	0.0	chr1	192066291	192066317	(56890105)	+	(T)n	Simple_repeat	1	27	(0)	282922
1504	19.6	5.6	2.5	chr1	192066321	192066478	(56889944)	C	AluJr	SINE/Alu	(28)	284	134	282923
26	0.0	0.0	0.0	chr1	192066479	192066503	(56889919)	+	(T)n	Simple_repeat	1	25	(0)	282924
1504	19.6	5.6	2.5	chr1	192066504	192066619	(56889803)	C	AluJr	SINE/Alu	(196)	116	1	282923
594	28.6	11.1	0.9	chr1	196878354	196878579	(52077843)	+	MIRb	SINE/MIR	17	268	(0)	289194
18	14.7	4.3	2.0	chr1	197201312	197201358	(51755064)	+	(CCCCT)n	Simple_repeat	1	49	(0)	289611
2304	29.9	11.8	0.8	chr1	198546565	198547511	(50408911)	+	L2a	LINE/L2	2100	3169	(257)	291355
203	30.5	3.7	7.1	chr1	198547532	198547672	(50408750)	+	MIR	SINE/MIR	127	262	(0)	291356
2161	12.3	3.9	0.0	chr1	199860075	199860253	(49096169)	C	AluSx1	SINE/Alu	(0)	312	134	293114
28	8.4	0.0	0.0	chr1	199898500	199898537	(49057885)	+	(A)n	Simple_repeat	1	38	(0)	293187
205	33.3	20.0	2.6	chr1	200390257	200390527	(48565895)	+	L2c	LINE/L2	3056	3385	(2)	294166
18	4.2	0.0	0.0	chr1	200409262	200409286	(48547136)	+	(GTG)n	Simple_repeat	1	25	(0)	294190
33	26.5	0.0	0.0	chr1	200409595	200409678	(48546744)	+	(GCC)n	Simple_repeat	1	84	(0)	294191
14	12.9	2.6	5.1	chr1	200409732	200409769	(48546653)	+	GA-rich	Low_complexity	1	39	(0)	294192
17	11.1	0.0	0.0	chr1	200409951	200409979	(48546443)	+	(CCG)n	Simple_repeat	1	29	(0)	294193
2598	15.3	8.3	16.4	chr1	200638765	200639134	(48317288)	+	MER6A	DNA/TcMar-Tigger	52	327	(278)	294690
2570	8.1	0.3	0.3	chr1	200639135	200639441	(48316981)	C	AluSp	SINE/Alu	(6)	307	1	294692
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
383	5.3	0.0	0.0	chr1	200746116	200746172	(48210250)	+	L1MB3	LINE/L1	6120	6176	(7)	294927
445	29.8	17.4	3.6	chr1	200746173	200746620	(48209802)	C	L2	LINE/L2	(610)	2809	2265	294928
1388	19.1	9.6	0.4	chr1	200782783	200783064	(48173358)	C	AluJr	SINE/Alu	(0)	312	1	294999
5184	21.5	9.3	1.7	chr1	200783065	200783478	(48172944)	C	L1ME2	LINE/L1	(511)	5653	5205	294998
3201	26.9	7.1	3.7	chr1	201245985	201247594	(47708828)	+	L1ME3D	LINE/L1	3942	5608	(634)	295718
26	0.0	0.0	0.0	chr1	201247595	201247619	(47708803)	+	(T)n	Simple_repeat	1	25	(0)	295722
2147	10.1	0.7	0.0	chr1	201247621	201247897	(47708525)	C	AluSx1	SINE/Alu	(33)	279	1	295723
848	29.7	5.2	12.9	chr1	201937783	201937895	(47018527)	+	L2a	LINE/L2	3317	3424	(2)	296872
683	29.3	1.6	3.2	chr1	201938014	201938126	(47018296)	C	MIRb	SINE/MIR	(6)	256	150	296880
2461	7.3	0.3	0.0	chr1	201938127	201938428	(47017994)	C	AluSp	SINE/Alu	(10)	303	1	296881
3124	0.3	0.0	0.0	chr1	202341297	202341606	(46614816)	+	AluYa5	SINE/Alu	1	310	(1)	297722
297	28.4	3.8	1.0	chr1	202969247	202969349	(45987073)	C	MER94B	DNA/hAT-Blackjack	(4)	129	24	298832
285	29.2	2.1	1.4	chr1	203118081	203118190	(45838232)	+	MIR	SINE/MIR	108	215	(53)	299080
1863	12.6	0.0	8.4	chr1	203544824	203545156	(45411266)	C	AluJb	SINE/Alu	(7)	305	1	299798
131	12.8	0.0	0.0	chr1	203603947	203604181	(45352241)	+	(CCAT)n	Simple_repeat	1	235	(0)	299926
196	37.0	1.2	0.0	chr1	203604385	203604465	(45351957)	C	L3b	LINE/CR1	(151)	5081	5000	299927
1641	17.7	3.4	0.7	chr1	204786331	204786613	(44169809)	+	AluJo	SINE/Alu	1	291	(21)	302253
1700	18.5	13.3	9.1	chr1	204786614	204787065	(44169357)	C	L1M4	LINE/L1	(588)	5591	5169	302252
715	26.7	7.8	3.0	chr1	205750878	205751109	(43205313)	+	MIR	SINE/MIR	9	252	(10)	304034
221	29.6	3.0	1.0	chr1	206912388	206912486	(42043936)	+	MIRc	SINE/MIR	166	266	(2)	305906
26	3.4	0.0	0.0	chr1	207645822	207645851	(41310571)	+	(TGGGC)n	Simple_repeat	1	30	(0)	306954
35	2.8	0.0	0.0	chr1	208244300	208244336	(40712086)	+	(GCG)n	Simple_repeat	1	37	(0)	307822
82	6.2	0.0	0.0	chr1	209588320	209588419	(39368003)	+	(TGGAT)n	Simple_repeat	1	100	(0)	309891
223	33.3	6.2	0.8	chr1	210400993	210401113	(38555309)	C	MIRc	SINE/MIR	(17)	251	124	311112
14911	13.6	3.6	2.6	chr1	211420280	211422138	(37534284)	+	Tigger4	DNA/TcMar-Tigger	5	1923	(808)	312663
181	32.4	5.6	2.2	chr1	211592093	211592231	(37364191)	C	MIR3	SINE/MIR	(5)	203	60	313000
1571	28.2	14.9	4.6	chr1	211814666	211815768	(37140654)	+	L2b	LINE/L2	1791	3026	(393)	313442
13	7.6	3.1	6.1	chr1	212529442	212529473	(36426949)	+	(CTCC)n	Simple_repeat	1	33	(0)	314693
234	23.4	6.1	0.0	chr1	212549052	212549128	(36407294)	+	MamTip3	DNA/hAT-Tip100	47	128	(372)	314730
2080	13.8	0.0	0.0	chr1	212549144	212549440	(36406982)	+	AluSz	SINE/Alu	1	297	(15)	314731
180	30.4	5.5	1.4	chr1	212561553	212561622	(36394800)	+	MIR3	SINE/MIR	41	113	(95)	314757
395	26.1	2.3	8.3	chr1	212561812	212561996	(36394426)	C	X7B_LINE	LINE/CR1	(1)	266	75	314758
23	11.5	8.8	0.0	chr1	212950625	212950684	(36005738)	+	(GCCCCA)n	Simple_repeat	1	65	(0)	315493
49	19.7	1.8	0.9	chr1	212964752	212964864	(35991558)	+	(ATCC)n	Simple_repeat	1	115	(0)	315511
1969	15.7	1.7	0.0	chr1	212964923	212965215	(35991207)	C	AluSx	SINE/Alu	(14)	298	1	315512
21	7.7	0.0	0.0	chr1	213987549	213987576	(34968846)	+	(A)n	Simple_repeat	1	28	(0)	317037
22	15.2	0.0	2.2	chr1	213987703	213987748	(34968674)	+	G-rich	Low_complexity	1	46	(0)	317038
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
61	25.9	3.3	2.3	chr1	213988205	213988272	(34968150)	+	(CTCTT)n	Simple_repeat	34	219	(0)	317039
592	30.2	4.3	2.6	chr1	214495123	214495350	(34461072)	+	MIRb	SINE/MIR	20	251	(17)	317796
2485	7.4	0.3	1.0	chr1	214495664	214495994	(34460428)	C	AluSp	SINE/Alu	(0)	313	1	317797
1302	17.2	5.7	4.5	chr1	214537791	214538101	(34418321)	C	MER33	DNA/hAT-Charlie	(0)	324	10	317857
14	7.5	3.3	3.2	chr1	214538196	214538225	(34418197)	+	(AAGG)n	Simple_repeat	1	31	(0)	317858
440	33.1	3.4	0.0	chr1	214538259	214538427	(34417995)	+	MIR	SINE/MIR	7	181	(81)	317859
174	17.5	0.9	0.0	chr1	214679623	214679938	(34276484)	+	(TTC)n	Simple_repeat	1	319	(0)	318055
28485	1.2	0.0	0.1	chr1	217690493	217696523	(31259899)	C	L1PA2	LINE/L1	(4)	6151	125	322095
22	3.6	0.0	0.0	chr1	218441677	218441705	(30514717)	+	(AAC)n	Simple_repeat	1	29	(0)	323257
947	33.6	6.6	5.1	chr1	218690854	218691623	(30264799)	C	L2a	LINE/L2	(227)	3199	2423	323649
18	7.8	0.0	0.0	chr1	219536572	219536598	(29419824)	+	(GTT)n	Simple_repeat	1	27	(0)	324751
268	36.6	8.1	4.2	chr1	220095693	220096000	(28860422)	C	L2	LINE/L2	(349)	3070	2750	325679
380	33.1	2.4	1.8	chr1	220261430	220261598	(28694824)	+	L2	LINE/L2	2700	2869	(550)	325940
393	33.3	2.5	3.5	chr1	220261594	220261792	(28694630)	+	L2c	LINE/L2	2665	2861	(558)	325941
803	33.6	14.6	3.1	chr1	220269903	220271077	(28685345)	+	L2c	LINE/L2	1806	3152	(235)	325954
14	26.7	0.0	2.0	chr1	220271814	220271864	(28684558)	+	G-rich	Low_complexity	1	51	(0)	325956
1589	21.5	5.6	5.9	chr1	221727880	221728270	(27228152)	+	MSTD	LTR/ERVL-MaLR	1	390	(6)	328084
189	35.4	0.0	6.8	chr1	222456732	222456819	(26499603)	+	MIR	SINE/MIR	65	146	(116)	329152
535	23.5	5.1	7.8	chr1	222456832	222456884	(26499538)	+	MER5B	DNA/hAT-Charlie	1	51	(127)	329153
2408	12.5	7.8	0.8	chr1	222456885	222457278	(26499144)	+	MSTA	LTR/ERVL-MaLR	5	428	(0)	329154
9644	16.0	1.2	0.2	chr1	222457279	222458892	(26497530)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	329154
486	25.0	1.7	0.8	chr1	223134016	223134132	(25822290)	+	MIRb	SINE/MIR	55	172	(96)	330257
1221	15.7	12.4	2.5	chr1	223675299	223675644	(25280778)	C	MSTA	LTR/ERVL-MaLR	(2)	426	7	330997
322	4.7	0.0	0.0	chr1	223675650	223675692	(25280730)	+	L1PREC2	LINE/L1	6117	6159	(1)	330996
213	33.2	12.1	7.7	chr1	223682553	223682904	(25273518)	+	L2a	LINE/L2	2938	3309	(78)	331004
232	30.0	15.5	5.9	chr1	223837871	223838309	(25118113)	+	L2a	LINE/L2	2935	3423	(3)	331302
534	11.4	1.2	0.0	chr1	223838644	223838722	(25117700)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	331303
1726	24.6	9.5	0.7	chr1	223847663	223848377	(25108045)	C	L2a	LINE/L2	(195)	3231	2435	331317
4070	9.0	0.4	0.4	chr1	223848437	223848992	(25107430)	C	L1PA14	LINE/L1	(0)	6161	5606	331318
574	14.7	3.3	0.0	chr1	224011568	224011683	(24944739)	C	MER67C	LTR/ERV1	(0)	711	592	331633
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
1226	25.1	16.5	4.3	chr1	224053580	224053945	(24902477)	+	L1MC4	LINE/L1	7374	7792	(250)	331685
233	33.2	20.1	2.0	chr1	224218865	224219168	(24737254)	C	L2c	LINE/L2	(28)	3359	2987	332075
1288	12.1	9.6	0.5	chr1	224219286	224219484	(24736938)	C	AluSz6	SINE/Alu	(9)	303	85	332076
36	25.6	4.1	2.6	chr1	224434585	224434730	(24521692)	+	(CGG)n	Simple_repeat	1	152	(0)	332551
565	31.5	7.8	8.5	chr1	224727243	224727537	(24228885)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	118	333054
1015	25.1	13.5	7.0	chr1	225580154	225580581	(23375841)	+	MLT1F2	LTR/ERVL-MaLR	94	553	(7)	334176
184	34.6	1.9	4.6	chr1	225597997	225598105	(23358317)	C	MIRb	SINE/MIR	(79)	189	84	334204
2019	12.8	1.3	2.2	chr1	226319885	226320196	(22636226)	C	AluSq2	SINE/Alu	(4)	309	1	335669
286	33.7	1.1	2.2	chr1	226320224	226320240	(22636182)	+	L1MB8	LINE/L1	5753	5769	(425)	335670
1359	6.3	5.9	0.0	chr1	226320241	226320430	(22635992)	+	L1PREC2	LINE/L1	5959	6160	(0)	335671
286	22.5	0.0	0.0	chr1	226622330	226622400	(22334022)	+	L1M4	LINE/L1	3557	3627	(2519)	336196
298	16.1	0.0	3.5	chr1	226622815	226622836	(22333586)	+	SVA_A	Retroposon/SVA	252	307	(1080)	336197
298	2.8	0.0	0.0	chr1	226622837	226622872	(22333550)	C	Alu	SINE/Alu	(238)	63	28	336198
1604	14.8	1.9	3.0	chr1	226622922	226623192	(22333230)	+	AluJb	SINE/Alu	1	268	(44)	336199
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
3980	25.6	11.6	2.4	chr1	227364382	227365576	(21590846)	C	L2a	LINE/L2	(1284)	2135	784	337381
2224	18.6	3.2	2.1	chr1	227564047	227564512	(21391910)	C	MER57E3	LTR/ERV1	(16)	471	1	337651
2721	13.1	0.0	1.5	chr1	227595866	227596269	(21360153)	C	HERVE_a-int	LTR/ERV1	(7449)	398	1	337688
8555	18.3	6.2	6.1	chr1	227955196	227956949	(20999473)	C	L1MD2	LINE/L1	(809)	5337	3575	338096
5422	17.6	5.9	2.7	chr1	228032516	228033979	(20922443)	C	L1MB7	LINE/L1	(345)	5839	4331	338205
215	22.9	5.4	0.0	chr1	228310179	228310787	(20645635)	+	(CATC)n	Simple_repeat	1	642	(0)	338541
287	38.6	3.0	0.8	chr1	228310798	228310925	(20645497)	C	L2c	LINE/L2	(0)	3387	3257	338542
11	19.2	9.1	1.7	chr1	228809029	228809083	(20147339)	+	(AATGAG)n	Simple_repeat	1	60	(0)	339226
189	27.0	3.1	1.6	chr1	228809173	228809236	(20147186)	C	MIR3	SINE/MIR	(3)	205	141	339227
686	25.8	3.6	3.2	chr1	229296248	229296467	(19659955)	+	MIR	SINE/MIR	13	233	(29)	340018
644	22.9	3.4	0.7	chr1	229296469	229296613	(19659809)	C	MER3	DNA/hAT-Charlie	(60)	149	1	340019
675	28.8	5.8	0.9	chr1	229296920	229297133	(19659289)	+	MIRb	SINE/MIR	35	259	(9)	340020
182	36.8	9.0	1.3	chr1	229508750	229509126	(19447296)	+	L2c	LINE/L2	2326	2734	(685)	340395
16	20.3	0.0	2.4	chr1	230066975	230067016	(18889406)	+	(CCCCGC)n	Simple_repeat	1	42	(0)	341372
2251	14.7	3.9	0.7	chr1	231248065	231248446	(17707976)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2334	343176
896	11.2	0.8	3.0	chr1	231248447	231248580	(17707842)	+	FLAM_C	SINE/Alu	1	131	(12)	343177
2157	17.7	3.5	7.3	chr1	231248581	231248648	(17707774)	C	Tigger2a	DNA/TcMar-Tigger	(375)	59	2	343176
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
212	34.4	10.1	4.9	chr1	231605825	231605939	(17350483)	+	MIRb	SINE/MIR	137	252	(16)	343792
427	30.9	3.0	6.5	chr1	231606203	231606467	(17349955)	+	MIRb	SINE/MIR	3	252	(10)	343794
30037	9.4	1.3	1.2	chr1	232197077	232201638	(16754784)	C	HERVL-int	LTR/ERVL	(0)	5654	1022	344640
2832	15.1	2.3	0.0	chr1	232571562	232571977	(16384445)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	345106
3979	22.2	11.4	7.1	chr1	233390753	233391758	(15564664)	C	L1M4b	LINE/L1	(5520)	1347	257	346312
43	15.7	4.8	1.8	chr1	234207363	234207467	(14748955)	+	(TCCT)n	Simple_repeat	1	110	(0)	347516
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
21	23.3	0.0	0.0	chr1	234609909	234609953	(14346469)	+	G-rich	Low_complexity	1	45	(0)	348166
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
5224	22.9	8.2	3.8	chr1	234686800	234688511	(14267911)	+	L1ME1	LINE/L1	3804	5601	(751)	348277
224	34.4	2.3	1.6	chr1	234711540	234711666	(14244756)	+	L2c	LINE/L2	2504	2631	(788)	348316
346	22.9	14.1	0.7	chr1	234711673	234711813	(14244609)	+	MIR	SINE/MIR	100	262	(0)	348317
1895	16.1	0.7	1.0	chr1	234711816	234712113	(14244309)	C	AluJr	SINE/Alu	(15)	297	1	348318
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
959	28.6	2.5	3.1	chr1	234832211	234832531	(14123891)	C	Charlie23a	DNA/hAT-Charlie	(15)	324	6	348507
320	24.0	3.9	0.0	chr1	234832836	234832935	(14123487)	+	L1ME4a	LINE/L1	6016	6119	(5)	348508
1601	19.6	3.1	0.0	chr1	234864376	234864660	(14091762)	+	AluJr	SINE/Alu	1	294	(18)	348563
594	27.6	20.0	2.0	chr1	235411759	235412157	(13544265)	+	L2	LINE/L2	1723	2211	(1208)	349695
61	4.6	2.0	4.0	chr1	235412158	235412256	(13544166)	+	(TCCCC)n	Simple_repeat	1	101	(0)	349696
31	19.5	4.4	7.9	chr1	235585080	235585238	(13371184)	+	(TTCC)n	Simple_repeat	1	153	(0)	350042
1252	16.5	7.6	0.0	chr1	235585239	235585444	(13370978)	C	AluJr	SINE/Alu	(7)	305	83	350043
14	12.2	8.2	3.8	chr1	235588828	235588876	(13367546)	+	(CCACT)n	Simple_repeat	1	53	(0)	350049
2680	14.5	11.3	3.9	chr1	235589033	235589593	(13366829)	+	LTR18B	LTR/ERVL	1	608	(6)	350050
11442	21.4	1.8	2.0	chr1	235672704	235675132	(13281290)	+	HERVIP10B3-int	LTR/ERV1	5179	7602	(1)	350207
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
293	28.8	10.9	2.4	chr1	236307323	236307489	(12648933)	+	MER102b	DNA/hAT-Charlie	123	305	(26)	351357
184	23.1	0.0	0.0	chr1	236390908	236390946	(12565476)	+	MIR	SINE/MIR	66	104	(158)	351528
1117	13.8	0.0	0.0	chr1	236390960	236391111	(12565311)	C	AluSc	SINE/Alu	(24)	285	134	351529
354	32.2	8.8	4.0	chr1	236391182	236391333	(12565089)	C	MLT1K	LTR/ERVL-MaLR	(387)	208	49	351530
2222	12.3	0.0	0.3	chr1	240102865	240103165	(8853257)	C	AluSx	SINE/Alu	(12)	300	1	357153
474	25.7	16.3	0.4	chr1	240201980	240202206	(8754216)	C	LTR67B	LTR/ERVL	(336)	284	15	357314
2540	7.9	0.0	0.0	chr1	240218003	240218307	(8738115)	+	AluSc	SINE/Alu	1	305	(4)	357332
436	13.6	1.3	4.9	chr1	240218495	240218575	(8737847)	+	7SLRNA	srpRNA	236	313	(7)	357333
1953	12.8	0.0	6.9	chr1	240370941	240371259	(8585163)	C	AluSz	SINE/Alu	(15)	297	1	357538
2002	29.2	6.1	4.3	chr1	240399325	240400238	(8556184)	+	L1M4b	LINE/L1	62	1221	(5646)	357573
207	28.9	6.6	5.9	chr1	240613722	240613857	(8342565)	C	MIR1_Amn	SINE/MIR	(29)	201	65	357928
23542	16.2	2.0	2.4	chr1	241450793	241455070	(7501352)	C	ERVL-B4-int	LTR/ERVL	(2)	5712	1452	359303
979	18.6	1.7	0.0	chr1	241455053	241455224	(7501198)	C	ERVL-B4-int	LTR/ERVL	(3434)	2323	2149	359303
6179	18.8	2.4	4.0	chr1	241455231	241456515	(7499907)	C	ERVL-B4-int	LTR/ERVL	(4245)	1512	249	359303
30	24.1	0.9	4.7	chr1	241639705	241639834	(7316588)	+	(GGCGG)n	Simple_repeat	1	125	(0)	359585
1026	20.1	2.3	6.9	chr1	241990214	241990351	(6966071)	+	MLT1G	LTR/ERVL-MaLR	262	400	(191)	360280
2426	7.4	1.0	0.0	chr1	241990352	241990647	(6965775)	C	AluSc8	SINE/Alu	(8)	303	5	360281
2366	14.0	9.0	1.2	chr1	242206441	242206851	(6749571)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2273	360625
1698	19.7	1.2	2.3	chr1	242206896	242207243	(6749179)	C	MLT2C1	LTR/ERVL	(53)	344	1	360624
212	33.3	5.0	0.9	chr1	242207499	242207613	(6748809)	+	L2c	LINE/L2	2972	3091	(296)	360626
237	33.3	3.0	5.8	chr1	243480140	243480276	(5476146)	C	L2	LINE/L2	(610)	2809	2677	362665
344	6.8	1.3	5.1	chr1	243480279	243480915	(5475507)	+	(ATGG)n	Simple_repeat	1	645	(0)	362666
231	24.6	1.6	0.0	chr1	244658570	244658630	(4297792)	+	L2a	LINE/L2	3362	3423	(3)	364512
2500	19.7	11.2	0.2	chr1	244659255	244659803	(4296619)	C	MLT1E2	LTR/ERVL-MaLR	(3)	624	8	364513
1979	14.8	1.0	1.0	chr1	244734936	244735239	(4221183)	C	AluSx1	SINE/Alu	(8)	304	1	364643
2218	13.2	4.8	5.5	chr1	244735240	244735398	(4221024)	+	LTR23	LTR/ERV1	283	434	(3)	364640
3982	9.6	3.0	1.1	chr1	244735453	244736010	(4220412)	+	MER61E	LTR/ERV1	1	569	(0)	364644
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
326	36.1	0.8	0.6	chr1	247275661	247276440	(1679982)	+	(GAATG)n	Satellite	1	779	(0)	368878
814	26.3	11.1	6.5	chr10	299002	299465	(133497957)	C	L1MC4	LINE/L1	(3)	8039	7552	371401
3305	18.9	4.8	4.6	chr10	299499	300523	(133496899)	+	L1MB3	LINE/L1	4985	6028	(155)	371402
6119	15.8	3.8	0.8	chr10	838036	839436	(132957986)	+	L1MC1	LINE/L1	4885	6328	(5)	371892
734	19.4	1.6	2.2	chr10	1443931	1445569	(132351853)	+	(ATCC)n	Simple_repeat	1	1666	(0)	372581
14	11.2	12.0	1.8	chr10	1685191	1685240	(132112182)	+	(TGTGTGT)n	Simple_repeat	1	56	(0)	372818
14	10.6	0.0	5.9	chr10	1685251	1685284	(132112138)	+	(AGACAG)n	Simple_repeat	1	34	(0)	372819
1113	22.8	4.0	11.9	chr10	3198325	3198727	(130598695)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	5	374757
2453	8.5	0.3	0.0	chr10	5853050	5853354	(127944068)	+	AluSp	SINE/Alu	1	306	(7)	378442
215	26.9	0.0	0.0	chr10	5853355	5853406	(127944016)	C	L2b	LINE/L2	(664)	2755	2704	378431
520	18.8	9.5	0.0	chr10	5853443	5853575	(127943847)	+	MLT1G3	LTR/ERVL-MaLR	39	185	(394)	378443
684	12.4	8.9	0.0	chr10	5853576	5853688	(127943734)	C	AluYh3a3	SINE/Alu	(14)	278	155	378444
248	36.9	6.2	1.0	chr10	5860400	5860599	(127936823)	+	LTR67B	LTR/ERVL	410	620	(0)	378462
369	24.3	10.7	8.8	chr10	5860615	5860853	(127936569)	+	L1ME4b	LINE/L1	350	593	(299)	378463
278	14.5	14.8	6.8	chr10	6151942	6152015	(127645407)	C	MER5B	DNA/hAT-Charlie	(14)	164	84	378983
342	16.0	0.5	0.8	chr10	6259053	6259661	(127537761)	+	(CATC)n	Simple_repeat	1	612	(0)	379197
624	27.1	11.2	9.5	chr10	6344494	6344958	(127452464)	+	MLT1J	LTR/ERVL-MaLR	1	474	(38)	379363
1286	17.5	6.8	2.4	chr10	6598554	6598800	(127198622)	C	L1MA4	LINE/L1	(2)	6298	6038	379756
1069	18.9	5.7	8.9	chr10	6911071	6911282	(126886140)	+	MER39	LTR/ERV1	393	594	(113)	380247
2722	5.7	0.3	0.0	chr10	6911283	6911583	(126885839)	+	AluY	SINE/Alu	10	311	(0)	380248
2273	11.2	0.0	0.0	chr10	7436154	7436449	(126360973)	+	AluSg	SINE/Alu	2	297	(13)	381004
13	16.9	4.8	2.3	chr10	7436597	7436638	(126360784)	+	(TCTTCC)n	Simple_repeat	1	44	(0)	381005
60	0.0	0.0	0.0	chr10	7878691	7878744	(125918678)	+	(ATGT)n	Simple_repeat	1	54	(0)	381774
1977	15.7	0.4	0.0	chr10	7878746	7879026	(125918396)	C	AluSz	SINE/Alu	(29)	283	2	381775
18	20.3	1.4	6.9	chr10	8054413	8054483	(125742939)	+	(CCCG)n	Simple_repeat	1	72	(0)	382057
2413	12.3	7.0	2.2	chr10	8160198	8160604	(125636818)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	382246
477	25.8	5.6	6.5	chr10	11612005	11612203	(122185219)	+	MIR	SINE/MIR	12	208	(54)	387154
1758	16.5	2.5	0.0	chr10	11774452	11774723	(122022699)	C	AluJb	SINE/Alu	(12)	300	22	387488
14	10.4	9.3	2.1	chr10	12333442	12333484	(121463938)	+	(GGAGAGAT)n	Simple_repeat	1	47	(0)	388712
1917	20.6	4.8	0.2	chr10	12624245	12624677	(121172745)	C	L1MB1	LINE/L1	(2)	6166	5713	389290
281	25.3	3.5	0.0	chr10	13161117	13161199	(120636223)	C	MIR3	SINE/MIR	(41)	167	82	390207
24	6.9	0.0	0.0	chr10	13707258	13707288	(120090134)	+	(AC)n	Simple_repeat	1	31	(0)	391219
418	30.6	7.9	3.1	chr10	14537393	14537557	(119259865)	+	MIRb	SINE/MIR	26	204	(64)	392623
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
1407	23.5	11.1	6.9	chr10	15431312	15431600	(118365822)	C	L1MC5	LINE/L1	(239)	9065	8791	394247
3556	11.9	0.9	4.2	chr10	15431601	15431975	(118365447)	+	MER1A	DNA/hAT-Charlie	3	376	(153)	394249
1898	31.7	14.2	4.2	chr10	15705210	15706472	(118090950)	+	L2a	LINE/L2	1360	2792	(627)	394687
26658	8.2	1.0	0.4	chr10	16167828	16171514	(117625908)	C	HERVL-int	LTR/ERVL	(1944)	3710	1	395352
279	10.0	0.3	10.5	chr10	18552605	18553307	(115244115)	+	(TTCCA)n	Simple_repeat	1	705	(0)	399307
1435	9.0	0.8	11.6	chr10	18555341	18563565	(115233857)	+	(GAATG)n	Satellite	1	8290	(0)	399308
1932	8.9	0.5	11.4	chr10	18563574	18573516	(115223906)	+	(TTCCA)n	Simple_repeat	1	9997	(0)	399309
2418	13.9	2.3	0.9	chr10	19166286	19166720	(114630702)	+	L1MA4	LINE/L1	5853	6293	(7)	400199
324	31.1	7.2	3.0	chr10	19166835	19167016	(114630406)	+	MIRb	SINE/MIR	6	196	(72)	400200
191	30.7	17.0	3.8	chr10	19167017	19167077	(114630345)	+	MIR	SINE/MIR	1	80	(182)	400201
2319	11.0	0.0	0.0	chr10	19167078	19167378	(114630044)	+	AluSc8	SINE/Alu	1	301	(10)	400202
1267	20.4	7.7	2.2	chr10	19718885	19719153	(114078269)	+	AluJr4	SINE/Alu	1	285	(27)	401014
81	8.3	0.0	0.0	chr10	19719155	19719259	(114078163)	+	(TA)n	Simple_repeat	1	105	(0)	401015
57	0.0	0.0	0.0	chr10	21508523	21508571	(112288851)	+	(TG)n	Simple_repeat	1	49	(0)	403849
28	27.4	2.5	0.0	chr10	21508573	21508653	(112288769)	+	GA-rich	Low_complexity	1	83	(0)	403850
13	14.1	0.0	5.7	chr10	21526051	21526085	(112271337)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	403870
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
2031	14.3	0.3	0.7	chr10	22021139	22021438	(111775984)	+	AluJo	SINE/Alu	3	301	(11)	404696
1102	32.8	14.6	4.6	chr10	22021439	22021692	(111775730)	C	L2	LINE/L2	(1366)	2053	1816	404695
2167	9.8	0.7	3.8	chr10	22021693	22022007	(111775415)	C	AluSx1	SINE/Alu	(7)	305	1	404697
254	28.1	3.8	3.0	chr10	22553307	22553438	(111243984)	+	MIRb	SINE/MIR	26	158	(110)	405432
266	28.7	14.4	2.0	chr10	22553487	22553632	(111243790)	C	MIR	SINE/MIR	(56)	206	40	405433
41	2.5	0.0	0.0	chr10	22712914	22712953	(111084469)	+	(GT)n	Simple_repeat	1	40	(0)	405675
12	24.6	3.6	3.5	chr10	22713358	22713413	(111084009)	+	(CCGC)n	Simple_repeat	1	58	(0)	405676
2426	21.3	3.6	1.9	chr10	22794792	22795210	(111002212)	C	L1ME1	LINE/L1	(1)	6178	5760	405821
2318	15.5	2.1	7.9	chr10	22795211	22795665	(111001757)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	405822
350	8.6	1.8	8.7	chr10	23330962	23331762	(110465660)	+	G-rich	Low_complexity	1	815	(0)	406629
1302	24.2	11.1	0.0	chr10	23331921	23332312	(110465110)	+	L1ME4b	LINE/L1	235	675	(217)	406630
2214	9.8	1.0	0.7	chr10	26845861	26846155	(106951267)	+	AluSx1	SINE/Alu	1	296	(16)	412410
2358	11.6	0.0	0.0	chr10	26846332	26846642	(106950780)	C	AluSz	SINE/Alu	(1)	311	1	412411
18	0.0	0.0	0.0	chr10	27714010	27714029	(106083393)	+	(A)n	Simple_repeat	1	20	(0)	413888
99	21.5	2.2	0.0	chr10	29254165	29254387	(104543035)	+	GA-rich	Low_complexity	1	228	(0)	416573
350	16.8	5.6	0.7	chr10	29870276	29871081	(103926341)	+	(CCAT)n	Simple_repeat	1	851	(0)	417635
187	31.8	1.5	1.5	chr10	29871094	29871160	(103926262)	C	MIRc	SINE/MIR	(110)	158	92	417636
2099	17.7	6.1	1.9	chr10	29971283	29971692	(103825730)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	417817
2507	12.0	2.8	3.6	chr10	29971788	29971854	(103825568)	C	L1MB3	LINE/L1	(2)	6181	6126	417818
26	10.1	1.6	6.5	chr10	31319141	31319201	(102478221)	+	G-rich	Low_complexity	1	62	(0)	420164
18	17.8	2.2	2.1	chr10	31319443	31319488	(102477934)	+	(CCG)n	Simple_repeat	1	47	(0)	420165
16	26.5	1.6	3.2	chr10	31319540	31319601	(102477821)	+	(CCG)n	Simple_repeat	1	63	(0)	420165
1352	23.8	11.8	6.5	chr10	36427886	36428105	(97369317)	+	MER20B	DNA/hAT-Charlie	539	775	(8)	427987
33	24.1	2.1	1.1	chr10	36428324	36428416	(97369006)	+	(GAATG)n	Simple_repeat	1	95	(0)	427989
1726	15.9	7.0	0.0	chr10	36428720	36429052	(97368370)	+	MLT1A0	LTR/ERVL-MaLR	8	365	(0)	427990
38	10.4	0.0	0.0	chr10	42165831	42165892	(91631530)	+	(GAATG)n	Simple_repeat	1	62	(0)	431764
85	9.6	1.3	1.3	chr10	42165959	42166108	(91631314)	+	(GGAAT)n	Simple_repeat	1	152	(0)	431765
1266	15.3	0.2	0.0	chr10	42321688	42322914	(91474508)	+	ALR/Alpha	Satellite/centr	1	1228	(0)	431942
2432	10.1	0.0	0.0	chr10	43375019	43375326	(90422096)	C	AluSx1	SINE/Alu	(4)	308	1	433373
209	16.7	4.0	0.0	chr10	43375405	43375452	(90421970)	+	L2b	LINE/L2	3324	3373	(2)	433374
181	30.6	0.0	2.0	chr10	43375836	43375885	(90421537)	C	MamRTE1	LINE/RTE-BovB	(1492)	2320	2272	433375
1473	24.9	14.8	2.7	chr10	44865190	44865960	(88931462)	+	L1MEc	LINE/L1	48	927	(5473)	435328
12027	20.2	3.4	2.7	chr10	46239732	46244977	(87552445)	+	L1M2	LINE/L1	358	5730	(1832)	437389
250	28.7	3.1	2.1	chr10	49629849	49629944	(84167478)	C	L2	LINE/L2	(667)	2752	2656	442115
1214	33.3	16.0	2.6	chr10	49629959	49631168	(84166254)	C	L2	LINE/L2	(843)	2576	1174	442115
14	34.1	0.0	0.0	chr10	51074669	51074730	(82722692)	+	(GAGCTG)n	Simple_repeat	1	62	(0)	444311
321	26.7	9.3	3.8	chr10	52106794	52106976	(81690446)	C	Chap1_Mam	DNA/hAT-Charlie	(122)	220	27	445841
7575	19.5	2.2	2.3	chr10	53666246	53668646	(80128776)	+	L1PA16	LINE/L1	1	2047	(4806)	447889
380	37.1	4.6	1.2	chr10	59683724	59683892	(74113530)	+	L2b	LINE/L2	3201	3375	(0)	455928
15	5.6	0.0	0.0	chr10	60781041	60781059	(73016363)	+	(TA)n	Simple_repeat	1	19	(0)	457610
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
276	28.3	5.0	3.4	chr10	60945061	60945177	(72852245)	C	L2b	LINE/L2	(1)	3374	3256	457857
207	34.7	13.6	1.6	chr10	60964535	60964727	(72832695)	C	L3b	LINE/CR1	(186)	5046	4827	457889
397	27.8	13.9	4.3	chr10	61454761	61454993	(72342429)	+	MIR	SINE/MIR	4	262	(6)	458592
1058	18.6	3.7	8.2	chr10	61455082	61455362	(72342060)	C	MER90a	LTR/ERV1	(11)	603	336	458593
895	13.1	15.7	0.0	chr10	61985475	61985657	(71811765)	+	L1MB8	LINE/L1	5899	6115	(63)	459382
304	20.9	1.7	10.8	chr10	62046240	62046368	(71751054)	+	UCON78	DNA	34	150	(293)	459472
506	20.5	0.8	5.4	chr10	62803537	62803665	(70993757)	+	MIR	SINE/MIR	124	246	(16)	460641
16	18.1	2.6	0.0	chr10	62813712	62813749	(70983673)	+	(GCT)n	Simple_repeat	1	39	(0)	460645
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
259	27.5	6.4	4.4	chr10	63707801	63707937	(70089485)	+	UCON99	DNA	2	141	(230)	462288
16770	13.2	3.6	2.1	chr10	67416632	67417450	(66379972)	+	L1PA16	LINE/L1	5668	6494	(9)	467419
15	14.9	8.9	0.0	chr10	67417661	67417705	(66379717)	+	A-rich	Low_complexity	1	49	(0)	467421
664	27.3	13.8	4.8	chr10	68097115	68097383	(65700039)	+	LFSINE_Vert	SINE/tRNA	14	310	(149)	468508
796	18.6	11.3	1.1	chr10	68097519	68097692	(65699730)	C	MIR	SINE/MIR	(11)	251	58	468509
89	18.3	2.2	0.6	chr10	68529582	68529759	(65267663)	+	(TA)n	Simple_repeat	1	182	(0)	469462
4565	7.0	1.4	0.7	chr10	68529862	68530378	(65267044)	C	LTR10C	LTR/ERV1	(0)	591	70	469463
13	18.9	2.8	0.0	chr10	68561552	68561587	(65235835)	+	G-rich	Low_complexity	1	37	(0)	469548
95	1.1	0.0	2.1	chr10	69725380	69725476	(64071946)	+	(CCAT)n	Simple_repeat	1	97	(0)	472143
483	26.8	2.3	0.0	chr10	69725539	69725665	(64071757)	C	LTR16D	LTR/ERVL	(4)	647	518	472144
184	19.1	11.3	0.0	chr10	69800423	69800469	(63996953)	C	MIR3	SINE/MIR	(139)	69	17	472287
28	4.5	4.0	3.9	chr10	69801822	69801871	(63995551)	+	(GGA)n	Simple_repeat	1	52	(0)	472288
18	17.2	0.0	2.4	chr10	70404143	70404204	(63393218)	+	(GCT)n	Simple_repeat	1	60	(0)	473402
14	21.3	1.8	5.4	chr10	70404189	70404243	(63393179)	+	(CTGAGG)n	Simple_repeat	1	56	(0)	473403
22	15.4	0.0	0.0	chr10	70404220	70404300	(63393122)	+	(GCGGCG)n	Simple_repeat	1	81	(0)	473404
15	15.0	2.4	4.8	chr10	70404332	70404372	(63393050)	+	(GCC)n	Simple_repeat	1	42	(0)	473405
1105	15.3	1.2	0.0	chr10	71604136	71604305	(62193117)	+	AluJo	SINE/Alu	137	308	(4)	475590
229	35.3	3.3	4.1	chr10	71773830	71773950	(62023472)	+	L2c	LINE/L2	3268	3387	(0)	475880
44	0.0	0.0	0.0	chr10	71774052	71774089	(62023333)	+	(CA)n	Simple_repeat	1	38	(0)	475881
799	10.3	3.3	7.0	chr10	71852163	71852318	(61945104)	C	MER39	LTR/ERV1	(11)	696	547	476013
320	28.4	2.9	0.0	chr10	71852454	71852555	(61944867)	C	MIRc	SINE/MIR	(125)	143	39	476014
1288	12.0	4.4	0.9	chr10	71992983	71993201	(61804221)	+	MER30	DNA/hAT-Charlie	1	227	(3)	476311
13714	11.6	4.1	6.4	chr10	71993202	71993674	(61803748)	C	Tigger1	DNA/TcMar-Tigger	(519)	1899	1457	476307
1821	13.2	1.0	5.5	chr10	71993675	71993817	(61803605)	+	AluJr4	SINE/Alu	1	142	(170)	476312
2308	11.2	0.3	0.3	chr10	72048028	72048339	(61749083)	C	AluSz	SINE/Alu	(0)	312	1	476433
458	29.7	3.1	4.2	chr10	72048773	72048965	(61748457)	+	MER102b	DNA/hAT-Charlie	2	192	(149)	476434
1608	9.8	3.1	4.9	chr10	72364016	72364281	(61433141)	C	AluSc8	SINE/Alu	(16)	295	35	477118
18	28.1	0.0	4.0	chr10	72740574	72740647	(61056775)	+	(ATTTTT)n	Simple_repeat	1	74	(0)	477952
24	20.0	7.4	2.0	chr10	72740648	72740662	(61056760)	+	(TTCTGAT)n	Simple_repeat	25	102	(0)	477951
1423	25.6	3.8	5.2	chr10	72740909	72741087	(61056335)	C	Helitron1Na_Mam	RC/Helitron	(0)	1062	897	477953
909	14.8	6.1	0.0	chr10	73414704	73414858	(60382564)	+	MER5A	DNA/hAT-Charlie	15	179	(10)	479256
247	29.9	8.0	6.6	chr10	73415129	73415339	(60382083)	+	L2a	LINE/L2	2205	2418	(1001)	479257
286	29.6	7.9	3.1	chr10	73892541	73892693	(59904729)	+	L2b	LINE/L2	2988	3156	(270)	480109
583	28.6	7.2	3.1	chr10	73997114	73997541	(59799881)	+	L1ME3G	LINE/L1	316	805	(119)	480355
15	17.6	0.0	4.8	chr10	73997951	73997992	(59799430)	+	G-rich	Low_complexity	1	42	(0)	480356
1667	14.2	0.0	12.7	chr10	75192407	75192589	(58604833)	C	AluJo	SINE/Alu	(17)	295	127	482625
306	28.2	7.3	8.0	chr10	75371436	75371697	(58425725)	C	MLT1O	LTR/ERVL-MaLR	(181)	361	102	482994
2359	9.1	0.0	0.7	chr10	75371925	75372231	(58425191)	C	AluSx1	SINE/Alu	(7)	305	1	482995
16	24.5	0.0	6.2	chr10	75401683	75401747	(58395675)	+	(GCTGC)n	Simple_repeat	1	65	(0)	483054
16	4.2	4.0	0.0	chr10	75401880	75401904	(58395518)	+	(CCG)n	Simple_repeat	1	26	(0)	483055
13	13.2	0.0	0.0	chr10	75403419	75403443	(58393979)	+	(GAGG)n	Simple_repeat	1	25	(0)	483057
840	30.4	10.1	3.5	chr10	75480577	75481485	(58315937)	C	L2a	LINE/L2	(479)	2940	1966	483165
2520	9.0	1.0	0.3	chr10	75875422	75875731	(57921691)	C	AluSq2	SINE/Alu	(1)	312	1	483728
2235	18.0	11.4	1.0	chr10	76102946	76103071	(57694351)	C	L1PA15	LINE/L1	(450)	5715	5565	484061
193	29.9	3.4	8.3	chr10	76103253	76103409	(57694013)	+	L3	LINE/CR1	3853	4001	(98)	484063
16	0.0	0.0	0.0	chr10	78029613	78029630	(55767792)	+	(T)n	Simple_repeat	1	18	(0)	487025
195	27.3	14.4	0.0	chr10	78267696	78267772	(55529650)	C	L2b	LINE/L2	(25)	3350	3261	487492
1826	14.1	3.1	0.0	chr10	78267937	78268249	(55529173)	+	MLT1D	LTR/ERVL-MaLR	180	502	(3)	487493
534	32.7	2.0	2.0	chr10	78916010	78916212	(54881210)	C	MIRc	SINE/MIR	(16)	252	50	488698
30	3.1	0.0	0.0	chr10	78916272	78916304	(54881118)	+	(TTCCA)n	Simple_repeat	1	33	(0)	488699
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
14	7.8	0.0	6.5	chr10	79069140	79069170	(54728252)	+	(CGGAG)n	Simple_repeat	1	31	(0)	489001
16	17.2	2.4	2.4	chr10	79069217	79069257	(54728165)	+	(CGG)n	Simple_repeat	1	42	(0)	489002
29	0.0	0.0	0.0	chr10	79242540	79242567	(54554855)	+	(CCCTC)n	Simple_repeat	1	28	(0)	489319
22	20.9	4.8	5.5	chr10	79242947	79243050	(54554372)	+	G-rich	Low_complexity	1	109	(0)	489320
17	11.2	2.3	6.7	chr10	79243084	79243127	(54554295)	+	(TCC)n	Simple_repeat	1	45	(0)	489321
15	16.1	2.9	0.0	chr10	79243263	79243297	(54554125)	+	(CGCCCC)n	Simple_repeat	1	36	(0)	489322
17	15.0	0.0	4.9	chr10	79243326	79243366	(54554056)	+	(GGC)n	Simple_repeat	1	41	(0)	489323
3818	17.6	7.3	3.5	chr10	79466641	79467232	(54330190)	+	L1MB7	LINE/L1	5584	6165	(19)	489684
2199	8.0	5.3	0.3	chr10	79467252	79467537	(54329885)	+	AluSx	SINE/Alu	1	301	(11)	489690
1648	15.3	4.7	2.4	chr10	80407619	80407906	(53389516)	C	AluJb	SINE/Alu	(12)	300	6	491174
3106	9.3	1.0	16.5	chr10	84126186	84126791	(49670631)	C	LTR10F	LTR/ERV1	(0)	511	1	496356
12	15.6	7.3	5.1	chr10	84328520	84328574	(49468848)	+	(GCTGCGC)n	Simple_repeat	1	59	(0)	496706
720	24.3	7.4	1.8	chr10	84537192	84537409	(49260013)	C	MIR	SINE/MIR	(29)	233	3	497001
194	20.9	3.4	11.3	chr10	84537453	84537549	(49259873)	C	MIRc	SINE/MIR	(117)	151	63	497002
324	20.0	6.2	0.0	chr10	84537798	84537872	(49259550)	C	L4_C_Mam	LINE/RTE-X	(203)	4935	4856	497003
529	21.1	13.4	5.9	chr10	84665940	84666125	(49131297)	+	LTR50	LTR/ERVL	1	202	(593)	497179
1018	23.3	10.3	0.0	chr10	84666247	84666525	(49130897)	+	LTR50	LTR/ERVL	475	785	(10)	497179
1216	10.2	11.8	0.0	chr10	86601628	86601814	(47195608)	C	MSTC	LTR/ERVL-MaLR	(216)	212	1	499836
865	21.2	7.1	0.5	chr10	86602010	86602232	(47195190)	C	LTR33	LTR/ERVL	(0)	515	277	499840
22	23.0	0.0	0.0	chr10	86760189	86760241	(47037181)	+	(TTTT)n	Simple_repeat	1	53	(0)	500089
1994	12.6	5.8	0.0	chr10	86760242	86760535	(47036887)	C	AluSx	SINE/Alu	(0)	312	1	500090
619	24.8	17.4	6.5	chr10	87783002	87783097	(46014325)	+	L1MEd	LINE/L1	2108	2196	(4907)	501824
1773	17.4	3.3	0.7	chr10	87783098	87783395	(46014027)	+	AluJb	SINE/Alu	1	306	(6)	501828
619	24.8	17.4	6.5	chr10	87783396	87783435	(46013987)	+	L1MEd	LINE/L1	2197	2234	(4869)	501824
456	31.6	17.3	6.5	chr10	88053715	88054114	(45743308)	C	L2b	LINE/L2	(1)	3386	2935	502232
204	31.3	11.7	1.6	chr10	88054224	88054408	(45743014)	C	L2b	LINE/L2	(653)	2766	2561	502232
225	34.7	3.2	0.8	chr10	88054410	88054531	(45742891)	+	MamGypsy2-I	LTR/Gypsy	2733	2857	(1309)	502227
193	33.8	2.4	2.4	chr10	91607909	91607990	(42189432)	+	L2c	LINE/L2	2672	2753	(666)	507573
4107	13.3	2.5	11.3	chr10	92553586	92554271	(41243151)	+	L1M1	LINE/L1	3229	3911	(2235)	509376
1567	21.6	3.4	0.7	chr10	92554272	92554562	(41242860)	+	AluJo	SINE/Alu	1	299	(13)	509377
2270	11.2	0.3	2.6	chr10	92554566	92554877	(41242545)	+	AluSp	SINE/Alu	1	305	(8)	509378
8052	16.5	8.8	6.3	chr10	92859065	92859542	(40937880)	C	L1M4b	LINE/L1	(5433)	1434	968	510034
730	25.7	7.8	1.7	chr10	92859557	92859786	(40937636)	C	LTR16A1	LTR/ERVL	(47)	409	165	510039
48	0.0	0.0	0.0	chr10	92859822	92859862	(40937560)	+	(TG)n	Simple_repeat	1	41	(0)	510040
835	25.9	6.8	2.5	chr10	93492041	93492278	(40305144)	C	MIR	SINE/MIR	(10)	252	4	511230
816	11.8	0.0	13.1	chr10	93492416	93492568	(40304854)	+	FLAM_C	SINE/Alu	1	133	(10)	511231
756	10.2	0.0	0.0	chr10	94165464	94165561	(39631861)	C	L1PA4	LINE/L1	(6057)	98	1	512477
2296	11.0	0.7	0.0	chr10	94165715	94166004	(39631418)	C	AluSx1	SINE/Alu	(19)	293	2	512478
379	20.3	0.0	1.4	chr10	94358316	94358384	(39439038)	C	AluJo	SINE/Alu	(243)	69	2	512838
447	27.5	7.2	5.6	chr10	94358411	94358575	(39438847)	C	MER20B	DNA/hAT-Charlie	(20)	199	31	512839
265	31.7	15.8	3.3	chr10	94358587	94358977	(39438445)	+	L2	LINE/L2	817	1265	(2154)	512840
322	29.7	1.1	1.1	chr10	94359023	94359114	(39438308)	C	L2a	LINE/L2	(30)	3396	3305	512841
26711	10.2	2.1	0.4	chr10	94650940	94655169	(39142253)	+	HERVL-int	LTR/ERVL	5	4347	(1307)	513401
765	19.2	0.8	0.0	chr10	95657379	95657508	(38139914)	+	FLAM_A	SINE/Alu	2	132	(10)	514690
53	0.0	0.0	0.0	chr10	97840249	97840293	(35957129)	+	(AG)n	Simple_repeat	1	45	(0)	518854
199	30.4	14.7	3.3	chr10	97840521	97840700	(35956722)	+	L2c	LINE/L2	3023	3226	(161)	518855
257	31.2	20.9	0.6	chr10	98134109	98134440	(35662982)	C	L2a	LINE/L2	(1177)	2242	1826	519432
14	7.0	6.2	2.9	chr10	100729069	100729100	(33068322)	+	GA-rich	Low_complexity	1	34	(0)	523886
16	30.8	6.4	0.0	chr10	100729456	100729549	(33067873)	+	(CCTCT)n	Simple_repeat	1	100	(0)	523887
273	24.2	14.5	6.8	chr10	103504780	103504912	(30292510)	C	L2b	LINE/L2	(140)	3235	3091	529098
1694	16.0	0.3	4.8	chr10	103505049	103505220	(30292202)	C	AluJr	SINE/Alu	(13)	299	140	529102
2003	12.5	0.3	1.3	chr10	103505221	103505524	(30291898)	C	AluSx1	SINE/Alu	(11)	301	1	529103
395	31.4	10.4	2.4	chr10	103511635	103511882	(30285540)	+	L2b	LINE/L2	3103	3372	(3)	529112
234	29.5	15.9	4.0	chr10	103512043	103512141	(30285281)	C	L2b	LINE/L2	(0)	3375	3263	529113
16	19.6	6.7	1.6	chr10	103555148	103555228	(30242194)	+	(GTGCTGC)n	Simple_repeat	1	85	(0)	529199
14	17.1	3.0	0.0	chr10	103555279	103555311	(30242111)	+	GA-rich	Low_complexity	1	34	(0)	529200
645	23.0	1.2	4.6	chr10	109904438	109904610	(23892812)	C	MER103C	DNA/hAT-Charlie	(11)	286	120	538570
4490	15.9	3.4	1.9	chr10	109904612	109905213	(23892209)	+	L1MB2	LINE/L1	5324	5948	(223)	538571
2399	7.8	0.3	1.3	chr10	110014519	110014826	(23782596)	C	AluSp	SINE/Alu	(8)	305	1	538781
16	0.0	0.0	0.0	chr10	110211074	110211090	(23586332)	+	(T)n	Simple_repeat	1	17	(0)	539109
11691	8.3	0.1	3.4	chr10	110331271	110332899	(23464523)	+	LTR12C	LTR/ERV1	5	1579	(0)	539278
1408	27.3	8.7	3.1	chr10	113054876	113055525	(20741897)	C	L1ME3Cz	LINE/L1	(354)	643	14	543718
13	18.0	6.5	2.0	chr10	113063497	113063542	(20733880)	+	GA-rich	Low_complexity	1	49	(0)	543725
53	0.0	0.0	0.0	chr10	114778569	114778613	(19018809)	+	(AC)n	Simple_repeat	1	45	(0)	546505
576	26.9	7.5	2.0	chr10	114778996	114779147	(19018275)	+	MamGypsy2-I	LTR/Gypsy	3910	4070	(96)	546500
641	26.1	15.8	0.5	chr10	114779174	114779392	(19018030)	C	MIR	SINE/MIR	(0)	262	4	546506
464	23.8	4.7	5.9	chr10	114796652	114796708	(19000714)	+	MIR3	SINE/MIR	109	172	(36)	546542
738	34.1	8.5	2.7	chr10	114796703	114797411	(19000011)	+	L2	LINE/L2	560	1313	(2106)	546544
2415	10.0	0.7	0.0	chr10	114993919	114994227	(18803195)	C	AluSx1	SINE/Alu	(0)	312	2	546904
20160	16.1	2.2	0.8	chr10	115272250	115275415	(18522007)	C	ERVL-B4-int	LTR/ERVL	(600)	5114	1894	547281
3866	15.8	2.0	0.5	chr10	115275415	115276044	(18521378)	C	ERVL-B4-int	LTR/ERVL	(4067)	1647	1008	547281
248	36.4	8.8	4.3	chr10	116947365	116947548	(16849874)	C	LFSINE_Vert	SINE/tRNA	(109)	350	158	549605
13	23.4	5.8	2.4	chr10	117137134	117137195	(16660227)	+	G-rich	Low_complexity	1	64	(0)	549930
934	27.9	8.8	4.9	chr10	117496110	117496645	(16300777)	+	L2a	LINE/L2	2879	3426	(0)	550581
15	15.2	0.0	5.0	chr10	117543187	117543192	(16254230)	+	(GCGGCGG)n	Simple_repeat	1	37	(0)	550657
12	12.0	0.0	6.5	chr10	117543193	117543223	(16254199)	+	(GGC)n	Simple_repeat	1	31	(0)	550658
15	0.0	0.0	0.0	chr10	117543427	117543445	(16253977)	+	(GCC)n	Simple_repeat	1	19	(0)	550659
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
391	33.6	9.9	4.3	chr10	118181177	118181481	(15615941)	C	MLT1N2	LTR/ERVL-MaLR	(160)	402	79	551675
69	7.2	0.0	0.0	chr10	118181646	118181734	(15615688)	+	(TGGAA)n	Simple_repeat	1	89	(0)	551676
1703	12.6	7.6	0.7	chr10	118746895	118747189	(15050233)	+	MER1B	DNA/hAT-Charlie	1	317	(22)	552529
1477	23.1	7.3	14.6	chr10	118747203	118747802	(15049620)	+	L1ME1	LINE/L1	5633	6196	(156)	552522
18	8.9	5.6	0.0	chr10	119360732	119360767	(14436655)	+	(TCCCTCC)n	Simple_repeat	1	38	(0)	553769
2632	17.6	4.0	1.7	chr10	120989001	120989524	(12807898)	+	LTR27	LTR/ERV1	3	494	(142)	556480
317	22.9	9.9	6.8	chr10	120989541	120989657	(12807765)	+	MER61-int	LTR/ERV1	40	160	(7028)	556481
1744	11.7	11.7	0.0	chr10	121091029	121091285	(12706137)	+	AluSg	SINE/Alu	1	291	(19)	556626
230	37.5	0.0	0.0	chr10	121091546	121091633	(12705789)	+	MER5A	DNA/hAT-Charlie	1	88	(101)	556627
581	28.9	0.6	0.6	chr10	121303342	121303501	(12493921)	+	MamRep434	DNA/TcMar-Tigger	6	165	(261)	556948
2144	7.1	0.0	1.6	chr10	121303774	121304026	(12493396)	+	AluY	SINE/Alu	30	278	(33)	556949
1840	21.4	7.3	6.6	chr10	122306037	122306407	(11491015)	+	MLT1D	LTR/ERVL-MaLR	117	505	(0)	558650
317	34.0	3.2	1.9	chr10	122306413	122306577	(11490845)	C	MIR	SINE/MIR	(70)	192	33	558649
189	31.0	9.4	0.0	chr10	122306535	122306621	(11490801)	+	MIR3	SINE/MIR	30	125	(83)	558653
736	19.9	4.2	0.6	chr10	122306622	122306783	(11490639)	C	MER96B	DNA/hAT-Tip100	(0)	417	250	558654
470	34.1	4.7	1.4	chr10	123065805	123066012	(10731410)	+	L2	LINE/L2	2622	2836	(583)	559719
337	29.8	6.4	2.2	chr10	123066088	123066221	(10731201)	C	L1M4	LINE/L1	(2386)	3760	3621	559720
195	32.1	0.0	0.0	chr10	124355262	124355314	(9442108)	+	L2c	LINE/L2	3335	3387	(0)	561751
154	22.9	2.8	6.4	chr10	124598695	124599304	(9198118)	+	(CCAT)n	Simple_repeat	1	627	(0)	562206
340	31.8	10.3	2.7	chr10	124599307	124599494	(9197928)	C	MIRb	SINE/MIR	(39)	229	32	562207
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
35	0.0	0.0	0.0	chr10	124792505	124792537	(9004885)	+	(TTTGT)n	Simple_repeat	1	33	(0)	562471
2296	5.1	0.3	2.7	chr10	124792538	124792693	(9004729)	C	AluSp	SINE/Alu	(28)	285	134	562472
2385	6.7	0.0	0.0	chr10	124801228	124801537	(8995885)	C	AluSp	SINE/Alu	(0)	313	2	562494
2032	14.8	0.0	1.3	chr10	125780945	125781248	(8016174)	C	AluJb	SINE/Alu	(12)	300	1	563994
308	28.6	7.4	0.0	chr10	126057938	126058049	(7739373)	+	MLT1K	LTR/ERVL-MaLR	146	266	(329)	564389
2071	10.6	2.9	0.0	chr10	126190991	126191293	(7606129)	C	AluSz6	SINE/Alu	(0)	312	1	564538
305	29.8	9.6	3.6	chr10	126191295	126191569	(7605853)	C	L2c	LINE/L2	(556)	2863	2571	564534
418	23.0	6.8	5.6	chr10	126251333	126251405	(7546017)	C	MIRb	SINE/MIR	(101)	167	97	564613
2927	17.3	5.2	2.2	chr10	126251406	126251443	(7545979)	C	MLT2B3	LTR/ERVL	(0)	554	517	564614
377	7.3	0.8	7.5	chr10	126251444	126252320	(7545102)	+	(GGAT)n	Simple_repeat	1	884	(0)	564615
3983	23.6	6.2	5.0	chr10	130911566	130912641	(2884781)	C	L1MB8	LINE/L1	(4957)	1910	810	570036
548	26.3	0.0	2.2	chr10	132279462	132279597	(1517825)	+	AluJb	SINE/Alu	121	253	(59)	571474
267	28.9	2.0	4.0	chr10	132415067	132415167	(1382255)	C	HAL1	LINE/L1	(156)	2351	2253	571618
2126	13.0	0.7	0.7	chr10	133315489	133315821	(481601)	C	AluSq	SINE/Alu	(0)	313	2	572369
2560	14.5	13.7	0.4	chr10	133315853	133316302	(481120)	+	LTR12F	LTR/ERV1	1	519	(0)	572370
627	26.0	7.3	5.5	chr10	133519330	133519744	(277678)	+	L1M5	LINE/L1	5153	5583	(660)	572590
421	23.7	12.9	2.9	chr10	133519764	133519902	(277520)	+	L1M5	LINE/L1	5636	5790	(452)	572590
284	20.4	2.3	2.1	chr10	133520013	133520101	(277321)	+	L1ME3D	LINE/L1	5963	6055	(188)	572594
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
433	29.0	5.2	2.0	chr11	255749	255896	(134830726)	+	L2a	LINE/L2	3273	3425	(1)	573148
229	22.1	0.8	0.4	chr11	255908	256406	(134830216)	+	(ATGG)n	Simple_repeat	1	503	(0)	573151
5046	24.3	8.4	0.4	chr11	681725	683200	(134403422)	C	L1M4b	LINE/L1	(5257)	1610	7	573764
393	21.8	0.6	1.2	chr11	1069583	1069622	(134017000)	+	(TCCA)n	Simple_repeat	1	41	(0)	574299
29	3.2	0.0	0.0	chr11	1069623	1069654	(134016968)	+	(CCAC)n	Simple_repeat	1	32	(0)	574300
393	21.8	0.6	1.2	chr11	1069655	1070430	(134016192)	+	(TCCA)n	Simple_repeat	2	774	(0)	574301
27	6.1	0.0	0.0	chr11	1070431	1070465	(134016157)	+	(CCAT)n	Simple_repeat	1	35	(0)	574302
393	21.8	0.6	1.2	chr11	1070466	1070522	(134016100)	+	(TCCA)n	Simple_repeat	3	57	(0)	574303
43	0.0	0.0	0.0	chr11	1070523	1070561	(134016061)	+	(CCAC)n	Simple_repeat	1	39	(0)	574304
1967	12.6	2.1	1.2	chr11	1264402	1264730	(133821892)	C	THE1D	LTR/ERVL-MaLR	(0)	381	50	574419
2630	7.0	2.8	0.6	chr11	1264731	1265077	(133821545)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	574420
1986	18.8	5.7	4.9	chr11	1334930	1335300	(133751322)	C	L1MB7	LINE/L1	(814)	5332	4963	574489
272	37.9	4.5	3.2	chr11	1335352	1335569	(133751053)	+	L2c	LINE/L2	3051	3271	(116)	574491
14	15.3	0.0	0.0	chr11	1550433	1550461	(133536161)	+	(CCCT)n	Simple_repeat	1	29	(0)	574730
28	0.0	0.0	0.0	chr11	1551968	1551994	(133534628)	+	(CCAT)n	Simple_repeat	1	27	(0)	574731
429	24.4	17.9	1.3	chr11	1861214	1861441	(133225181)	+	L2a	LINE/L2	3153	3426	(0)	575188
243	24.6	23.4	1.7	chr11	1862344	1862463	(133224159)	C	L3	LINE/CR1	(75)	4024	3871	575189
180	26.2	0.0	0.0	chr11	1892596	1892637	(133193985)	+	L2b	LINE/L2	3334	3375	(0)	575207
523	28.5	0.7	0.5	chr11	1892638	1894049	(133192573)	+	(GGAT)n	Simple_repeat	1	1422	(0)	575208
213	27.4	1.4	1.4	chr11	1932704	1933329	(133153293)	+	(TCCA)n	Simple_repeat	1	635	(0)	575257
164	22.9	3.0	2.1	chr11	2102112	2102580	(132984042)	+	(TGGA)n	Simple_repeat	1	483	(0)	575433
712	33.3	1.1	1.3	chr11	2124880	2127337	(132959285)	+	(TGGA)n	Simple_repeat	1	2485	(0)	575466
438	16.2	1.3	1.2	chr11	3131249	3132081	(131954541)	+	(CCAT)n	Simple_repeat	1	844	(0)	576624
264	31.6	2.5	4.9	chr11	3676906	3677028	(131409594)	C	MIRc	SINE/MIR	(138)	130	11	577428
13	29.1	4.3	1.4	chr11	6234899	6234983	(128851639)	+	G-rich	Low_complexity	1	87	(0)	580992
219	34.5	8.4	0.0	chr11	6235510	6235596	(128851026)	C	L2c	LINE/L2	(197)	3190	3096	580993
1118	29.1	14.4	4.2	chr11	6604474	6605505	(128481117)	C	L2c	LINE/L2	(209)	3178	2021	581572
465	32.4	2.7	0.9	chr11	9606782	9606996	(125479626)	C	L2	LINE/L2	(2493)	926	708	586173
221	19.1	10.5	5.6	chr11	9607095	9607166	(125479456)	C	L2	LINE/L2	(2908)	511	436	586173
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
276	29.8	5.0	4.1	chr11	11559381	11559478	(123527144)	+	L2b	LINE/L2	3238	3336	(39)	589389
339	26.9	0.8	0.1	chr11	11559504	11560353	(123526269)	+	G-rich	Low_complexity	1	857	(0)	589390
10274	20.8	6.8	3.8	chr11	11599918	11601718	(123484904)	C	L1PA8A	LINE/L1	(268)	3248	881	589452
1167	14.8	3.3	5.6	chr11	11601719	11601933	(123484689)	C	MER6B	DNA/TcMar-Tigger	(0)	210	1	589458
198	31.8	12.0	5.5	chr11	12704416	12704741	(122381881)	+	L2c	LINE/L2	3014	3363	(24)	591193
18	19.6	0.0	0.0	chr11	12704998	12705038	(122381584)	+	(GAAT)n	Simple_repeat	1	41	(0)	591194
576	31.5	8.7	2.1	chr11	12933160	12933352	(122153270)	C	L4_B_Mam	LINE/RTE-X	(1054)	3887	3673	591524
958	20.4	11.8	0.8	chr11	12933405	12933646	(122152976)	C	MER2	DNA/TcMar-Tigger	(73)	272	1	591530
235	26.6	19.0	0.0	chr11	12933696	12933819	(122152803)	C	MIRb	SINE/MIR	(35)	233	81	591531
6169	2.4	0.0	0.7	chr11	12933832	12934551	(122152071)	+	L1PA4	LINE/L1	5438	6152	(3)	591532
986	33.0	8.4	2.7	chr11	13107283	13108372	(121978250)	+	L2b	LINE/L2	2252	3422	(4)	591816
358	34.2	1.3	0.6	chr11	15808319	15808474	(119278148)	+	MER102c	DNA/hAT-Charlie	175	331	(0)	596152
27	20.0	2.8	1.4	chr11	16606190	16606263	(118480359)	+	(TTTCTTT)n	Simple_repeat	1	75	(0)	597232
1956	28.2	17.6	1.7	chr11	17011268	17012726	(118073896)	+	L2a	LINE/L2	1666	3406	(20)	597886
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
12	24.5	2.2	2.2	chr11	18321661	18321705	(116764917)	+	GA-rich	Low_complexity	1	46	(0)	600253
458	24.1	7.9	0.0	chr11	18321821	18321936	(116764686)	C	L2b	LINE/L2	(0)	3375	3250	600254
383	23.2	1.0	4.0	chr11	18394162	18394260	(116692362)	C	L2a	LINE/L2	(5)	3421	3326	600435
901	11.0	0.8	2.9	chr11	18619337	18619472	(116467150)	+	FLAM_C	SINE/Alu	1	133	(10)	600889
2318	10.1	0.0	0.0	chr11	18619477	18619774	(116466848)	+	AluSc5	SINE/Alu	1	298	(11)	600890
404	27.1	10.9	6.5	chr11	18763709	18763957	(116322665)	C	MIRb	SINE/MIR	(2)	260	1	601177
779	31.7	9.1	1.6	chr11	18764056	18764421	(116322201)	C	L3	LINE/CR1	(4)	4095	3700	601178
77	7.0	5.0	3.7	chr11	19610682	19610862	(115475760)	+	(ATGG)n	Simple_repeat	1	190	(0)	602534
13	19.4	0.0	5.1	chr11	22193319	22193357	(112893265)	+	GA-rich	Low_complexity	1	39	(0)	606581
18	20.3	3.9	0.0	chr11	27158717	27158767	(107927855)	+	(TTGTT)n	Simple_repeat	1	53	(0)	613485
953	10.6	0.0	0.8	chr11	27158768	27158890	(107927732)	C	AluYm1	SINE/Alu	(189)	122	1	613486
452	27.3	8.9	1.3	chr11	27445078	27445233	(107641389)	+	L2c	LINE/L2	3118	3286	(101)	613956
30604	15.6	4.2	2.6	chr11	27549312	27554966	(107531656)	C	ERVL-int	LTR/ERVL	(5)	5752	2	614153
23	14.6	0.0	2.1	chr11	27718546	27718592	(107368030)	+	(CCCCT)n	Simple_repeat	1	47	(0)	614396
14	18.4	0.0	0.0	chr11	29343850	29343880	(105742742)	+	A-rich	Low_complexity	1	31	(0)	616885
313	33.6	5.6	1.6	chr11	29344019	29344139	(105742483)	C	MIRb	SINE/MIR	(3)	265	140	616886
513	31.5	9.0	1.5	chr11	29344161	29344366	(105742256)	C	MIR	SINE/MIR	(14)	248	26	616887
753	24.4	5.1	4.0	chr11	31972501	31972752	(103113870)	C	MIR	SINE/MIR	(0)	262	8	620736
733	23.2	10.8	0.0	chr11	32583338	32583535	(102503087)	C	L1ME1	LINE/L1	(468)	5711	5490	621907
288	27.4	16.3	0.4	chr11	32947672	32947924	(102138698)	C	L1MEg	LINE/L1	(3534)	2612	2312	622515
13	11.6	3.6	0.0	chr11	32948091	32948118	(102138504)	+	GA-rich	Low_complexity	1	29	(0)	622519
327	30.5	3.3	2.2	chr11	32948127	32948304	(102138318)	+	L1M5	LINE/L1	2875	3054	(3092)	622520
417	18.8	4.0	0.0	chr11	32948332	32948427	(102138195)	C	L1ME3B	LINE/L1	(193)	6049	5950	622521
1154	18.4	0.0	2.3	chr11	32948430	32948647	(102137975)	+	AluJo	SINE/Alu	87	299	(13)	622522
19	20.9	5.9	1.4	chr11	33257311	33257378	(101829244)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	623167
27	3.5	0.0	0.0	chr11	33869482	33869511	(101217111)	+	(CGC)n	Simple_repeat	1	30	(0)	624189
18	26.0	3.7	2.4	chr11	33869617	33869697	(101216925)	+	(CCGCGG)n	Simple_repeat	1	84	(0)	624190
15	8.9	0.0	0.0	chr11	33869675	33869698	(101216924)	+	(GCT)n	Simple_repeat	1	24	(0)	624191
16	17.5	5.5	3.5	chr11	33869724	33869778	(101216844)	+	(CCG)n	Simple_repeat	1	58	(0)	624192
277	33.6	4.3	0.9	chr11	34405037	34405147	(100681475)	+	MIRb	SINE/MIR	88	202	(66)	625216
339	32.1	6.8	4.1	chr11	34405174	34405345	(100681277)	+	MIRb	SINE/MIR	2	178	(90)	625217
2822	23.0	7.5	4.0	chr11	35019270	35019622	(100067000)	C	BLACKJACK	DNA/hAT-Blackjack	(318)	2651	2276	626144
1514	11.5	4.1	4.5	chr11	35019623	35019913	(100066709)	C	L1MA1	LINE/L1	(0)	6302	6013	626147
2822	23.0	7.5	4.0	chr11	35019914	35020187	(100066435)	C	BLACKJACK	DNA/hAT-Blackjack	(694)	2275	1997	626144
18	3.7	0.0	6.2	chr11	35662600	35662631	(99423991)	+	(TCC)n	Simple_repeat	1	32	(0)	627134
12	35.1	1.4	1.4	chr11	35663487	35663556	(99423066)	+	GA-rich	Low_complexity	1	71	(0)	627135
30	14.9	1.4	4.1	chr11	36149834	36149905	(98936717)	+	(CTCATGA)n	Simple_repeat	1	73	(0)	627946
3468	16.0	3.8	6.2	chr11	43548954	43549660	(91536962)	+	LTR8	LTR/ERV1	2	690	(1)	638645
217	33.4	7.9	1.1	chr11	43550339	43550523	(91536099)	C	L2b	LINE/L2	(283)	3143	2933	638646
2455	8.1	1.3	0.0	chr11	43680064	43680371	(91406251)	C	AluSz	SINE/Alu	(0)	312	1	638832
39	36.7	0.0	0.7	chr11	45771137	45771290	(89315332)	+	(CA)n	Simple_repeat	1	154	(0)	642734
303	21.3	0.7	5.7	chr11	45771657	45771754	(89314868)	+	MIR	SINE/MIR	45	138	(130)	642735
289	27.5	16.9	2.2	chr11	45771850	45772041	(89314581)	+	L2a	LINE/L2	3126	3332	(94)	642736
1724	17.4	3.2	2.0	chr11	47213902	47214206	(87872416)	+	AluJo	SINE/Alu	3	311	(1)	645474
1604	12.6	0.0	6.9	chr11	47214511	47214787	(87871835)	+	AluJo	SINE/Alu	42	299	(13)	645475
1310	15.3	2.1	4.4	chr11	47379677	47380031	(87706591)	C	L1PB4	LINE/L1	(277)	6027	5670	645779
239	37.6	3.7	0.8	chr11	47380421	47380549	(87706073)	C	L2c	LINE/L2	(0)	3387	3228	645780
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
16	18.4	8.4	2.6	chr11	47553221	47553291	(87533331)	+	(GCGCCGA)n	Simple_repeat	1	77	(0)	646146
191	22.6	3.6	1.9	chr11	47553495	47553548	(87533074)	+	L2c	LINE/L2	3333	3387	(0)	646147
1302	24.1	11.5	6.2	chr11	50083186	50083825	(85002797)	+	L2a	LINE/L2	2563	3230	(196)	649892
26	21.3	0.0	2.9	chr11	50083826	50083894	(85002728)	+	(TTCT)n	Simple_repeat	1	69	(0)	649893
1585	17.3	0.4	5.3	chr11	50083895	50084052	(85002570)	C	AluJr	SINE/Alu	(33)	279	136	649894
20	0.0	0.0	0.0	chr11	57249810	57249831	(77836791)	+	(T)n	Simple_repeat	1	22	(0)	653334
2406	4.0	3.0	2.3	chr11	59549924	59550225	(75536397)	C	AluY	SINE/Alu	(7)	304	1	656944
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
656	1.4	0.0	0.0	chr11	59560335	59560407	(75526215)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	656970
2447	21.2	3.7	4.9	chr11	59561188	59561430	(75525192)	C	MER34A1	LTR/ERV1	(0)	587	328	656971
358	32.1	3.5	0.9	chr11	59668147	59668256	(75418366)	C	MIR3	SINE/MIR	(38)	170	58	657192
167	7.5	2.5	2.1	chr11	61122264	61122544	(73964078)	+	(ATGG)n	Simple_repeat	1	288	(0)	659539
408	31.5	14.3	0.5	chr11	61673611	61673827	(73412795)	C	L2a	LINE/L2	(556)	2863	2612	660661
321	16.8	1.8	2.7	chr11	61673847	61674567	(73412055)	+	(TGGA)n	Simple_repeat	1	714	(0)	660669
2469	9.0	0.0	0.3	chr11	62311415	62311726	(72774896)	+	AluSq10	SINE/Alu	1	311	(2)	661814
2173	8.7	0.7	0.3	chr11	62770240	62770539	(72316083)	C	AluSp	SINE/Alu	(12)	301	1	662764
931	13.4	0.0	0.0	chr11	64270649	64270782	(70815840)	+	FRAM	SINE/Alu	1	134	(42)	665282
19	24.7	3.7	3.5	chr11	64305585	64305666	(70780956)	+	(CGG)n	Simple_repeat	1	85	(0)	665354
24	32.9	0.0	1.2	chr11	64331663	64331747	(70754875)	+	(TG)n	Simple_repeat	1	85	(0)	665406
255	26.3	19.1	0.0	chr11	64331763	64331952	(70754670)	C	L2	LINE/L2	(348)	3071	2837	665407
461	30.3	10.0	5.4	chr11	64372728	64373133	(70713489)	C	MLT1K	LTR/ERVL-MaLR	(26)	569	143	665487
14	28.7	5.1	5.7	chr11	64594465	64594486	(70492136)	+	(TAGA)n	Simple_repeat	1	23	(0)	665927
43	0.0	0.0	0.0	chr11	64594487	64594525	(70492097)	+	(TAGG)n	Simple_repeat	1	39	(0)	665928
14	28.7	5.1	5.7	chr11	64594526	64594620	(70492002)	+	(TAGA)n	Simple_repeat	4	97	(0)	665929
1166	8.4	0.2	2.5	chr11	64594628	64596467	(70490155)	+	(ATGG)n	Simple_repeat	1	1844	(0)	665930
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
390	15.0	0.0	0.0	chr11	65477747	65477806	(69608816)	+	AluJo	SINE/Alu	74	133	(179)	667619
21	9.5	8.5	2.0	chr11	65477807	65477853	(69608769)	+	(AC)n	Simple_repeat	1	51	(0)	667620
181	26.7	10.3	3.0	chr11	66282791	66282925	(68803697)	+	MIR3	SINE/MIR	30	175	(33)	669177
501	32.5	9.3	0.0	chr11	66834095	66834288	(68252334)	C	MIRb	SINE/MIR	(22)	246	33	670355
833	26.0	5.6	0.9	chr11	66982262	66982482	(68104140)	+	MIR	SINE/MIR	6	237	(25)	670636
2104	12.5	0.7	2.0	chr11	67475664	67475796	(67610826)	C	AluSx1	SINE/Alu	(177)	135	1	671712
2308	24.5	7.5	9.9	chr11	67656135	67656610	(67430012)	+	MER101-int	LTR/ERV1	2007	2503	(4136)	672047
1990	12.2	2.7	2.7	chr11	67656611	67656906	(67429716)	C	AluSx	SINE/Alu	(16)	296	1	672050
2391	19.3	3.8	1.4	chr11	68251318	68251479	(66835143)	C	MLT2B3	LTR/ERVL	(388)	282	119	673066
331	14.9	13.8	0.0	chr11	68251483	68251576	(66835046)	+	L1M4	LINE/L1	3685	3793	(2851)	673054
1325	15.9	5.6	2.5	chr11	68251577	68251853	(66834769)	+	L1MB4	LINE/L1	5894	6179	(1)	673069
2198	9.0	1.0	0.3	chr11	68459681	68459969	(66626653)	+	AluSq2	SINE/Alu	1	291	(22)	673465
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
13	8.2	3.9	0.0	chr11	68460278	68460303	(66626319)	+	(CCCCG)n	Simple_repeat	1	27	(0)	673467
2523	7.1	0.0	0.3	chr11	68793464	68793772	(66292850)	+	AluY	SINE/Alu	1	308	(3)	673963
372	12.5	0.0	0.0	chr11	69110405	69111059	(65975563)	+	(CCAT)n	Simple_repeat	1	655	(0)	674529
338	37.4	9.6	1.6	chr11	69171127	69171397	(65915225)	C	L4_B_Mam	LINE/RTE-X	(207)	4931	4581	674633
1273	26.0	5.6	5.0	chr11	69171404	69171834	(65914788)	C	MLT2C2	LTR/ERVL	(0)	464	27	674634
288	9.4	2.3	2.3	chr11	69313736	69314297	(65772325)	+	(CATC)n	Simple_repeat	1	575	(0)	674883
332	34.6	5.5	0.0	chr11	69314494	69314649	(65771973)	+	MIRb	SINE/MIR	104	268	(0)	674884
2533	11.5	2.2	0.0	chr11	69482039	69482394	(65604228)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	675161
147	18.5	0.4	0.0	chr11	69482399	69482671	(65603951)	+	(GATG)n	Simple_repeat	1	274	(0)	675162
1688	21.6	3.1	0.5	chr11	69482695	69483071	(65603551)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	1	675163
17	0.0	4.0	0.0	chr11	69700767	69700791	(65385831)	+	(CCAGG)n	Simple_repeat	1	26	(0)	675530
596	8.9	3.1	3.2	chr11	70194029	70195316	(64891306)	+	(GATG)n	Simple_repeat	1	1287	(0)	676410
1870	11.4	1.5	0.7	chr11	72081141	72081413	(63005209)	+	AluJb	SINE/Alu	1	275	(37)	679310
651	23.8	14.0	9.0	chr11	72446813	72447012	(62639610)	+	L1ME4b	LINE/L1	698	880	(12)	679975
20	6.9	0.0	0.0	chr11	72447194	72447224	(62639398)	+	(CCATT)n	Simple_repeat	1	31	(0)	679982
394	27.5	1.4	14.2	chr11	72447454	72447758	(62638864)	C	L2b	LINE/L2	(201)	3186	2937	679983
6666	10.2	2.2	0.1	chr11	74496646	74497549	(60589073)	+	Tigger4	DNA/TcMar-Tigger	1	923	(1808)	684208
7865	9.8	1.0	0.6	chr11	74497547	74498644	(60587978)	+	Tigger4	DNA/TcMar-Tigger	1629	2731	(0)	684209
2474	6.8	0.0	0.3	chr11	76207080	76207386	(58879236)	+	AluSq2	SINE/Alu	1	306	(7)	687529
403	23.1	9.6	5.6	chr11	76207387	76207557	(58879065)	C	MIR	SINE/MIR	(52)	216	21	687528
26	0.0	0.0	0.0	chr11	76365357	76365381	(58721241)	+	(GTTTT)n	Simple_repeat	1	25	(0)	687860
1684	16.9	0.4	1.1	chr11	76365394	76365666	(58720956)	C	AluJb	SINE/Alu	(21)	291	21	687861
13	6.9	2.8	8.1	chr11	76657575	76657610	(58429012)	+	G-rich	Low_complexity	1	37	(0)	688404
16	17.7	1.7	6.8	chr11	76860858	76860921	(58225701)	+	(GGCCG)n	Simple_repeat	1	60	(0)	688820
16	13.1	0.0	5.4	chr11	76860956	76860992	(58225630)	+	(GGC)n	Simple_repeat	1	37	(0)	688821
295	25.0	8.3	6.5	chr11	77162340	77162446	(57924176)	+	MIRb	SINE/MIR	66	174	(94)	689363
276	33.0	1.0	1.0	chr11	77162624	77162721	(57923901)	C	MIR3	SINE/MIR	(1)	207	110	689364
13	10.6	0.0	8.3	chr11	77163018	77163053	(57923569)	+	(CCCTG)n	Simple_repeat	1	36	(0)	689365
2056	8.6	1.7	9.5	chr11	78080452	78080777	(57005845)	+	AluSq2	SINE/Alu	1	300	(13)	691309
31540	6.7	0.7	0.4	chr11	79124975	79128887	(55957735)	+	HERVL-int	LTR/ERVL	1	3927	(1727)	693329
12	16.2	7.0	2.2	chr11	82901319	82901361	(52185261)	+	(CCTC)n	Simple_repeat	1	46	(0)	699673
1344	18.5	6.0	2.4	chr11	86060216	86060654	(49025968)	C	Charlie1b	DNA/hAT-Charlie	(15)	508	1	704846
777	31.3	1.6	2.0	chr11	86787792	86788042	(48298580)	C	MIRc	SINE/MIR	(16)	252	3	706127
468	31.9	5.0	3.9	chr11	86930809	86931129	(48155493)	C	L2b	LINE/L2	(307)	3068	2751	706335
2169	21.1	4.5	3.0	chr11	86931154	86931721	(48154901)	+	L1ME2	LINE/L1	5561	6137	(27)	706337
238	29.1	4.8	0.0	chr11	87037226	87037304	(48049318)	+	L3	LINE/CR1	3992	4074	(25)	706529
1690	16.3	9.7	0.2	chr11	90239594	90239986	(44846636)	C	L1MA9	LINE/L1	(0)	6312	5879	711198
609	7.8	0.0	0.0	chr11	90239998	90240087	(44846535)	C	L1PA5	LINE/L1	(0)	6154	6065	711199
10413	7.3	0.7	0.0	chr11	90240088	90241455	(44845167)	+	L1P1	LINE/L1	17	1394	(4761)	711200
2555	14.8	0.8	0.2	chr11	90271290	90271690	(44814932)	C	L1PA7	LINE/L1	(6055)	406	4	711228
19	14.9	0.0	0.0	chr11	90271703	90271733	(44814889)	+	(T)n	Simple_repeat	1	31	(0)	711229
1263	7.3	1.2	0.0	chr11	90271734	90271897	(44814725)	C	LTR17	LTR/ERV1	(454)	326	161	711230
238	27.7	9.7	2.6	chr11	94136361	94136475	(40950147)	+	L2c	LINE/L2	3192	3315	(72)	716719
921	22.9	0.0	1.6	chr11	94774575	94774760	(40311862)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	717656
664	31.2	7.8	7.0	chr11	95093194	95093662	(39992960)	+	L2c	LINE/L2	2910	3382	(5)	718117
475	35.5	7.4	2.9	chr11	95512473	95512716	(39573906)	+	MIRb	SINE/MIR	5	260	(8)	718742
16	3.6	6.9	0.0	chr11	95513080	95513109	(39573513)	+	(TCTTT)n	Simple_repeat	1	32	(0)	718743
11495	24.4	6.0	5.9	chr11	95542977	95547277	(39539345)	C	ERV3-16A3_I-int	LTR/ERVL	(912)	4314	7	718795
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
2342	14.6	13.3	0.7	chr11	95836486	95837023	(39249599)	+	L1MB7	LINE/L1	5569	6184	(0)	719211
331	32.6	11.1	6.7	chr11	95922568	95922807	(39163815)	C	L2c	LINE/L2	(12)	3375	3124	719341
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
12	12.6	3.7	0.0	chr11	102111432	102111458	(32975164)	+	(TTCC)n	Simple_repeat	1	28	(0)	727407
28	20.4	2.9	0.0	chr11	102717124	102717192	(32369430)	+	(ATTCC)n	Simple_repeat	1	71	(0)	728385
1186	22.3	2.5	4.3	chr11	102717457	102717780	(32368842)	C	L1ME5	LINE/L1	(253)	5941	5624	728386
14	17.9	0.0	4.8	chr11	103109529	103109570	(31977052)	+	(CTTCCCC)n	Simple_repeat	1	42	(0)	729012
12	16.8	0.0	5.4	chr11	107591030	107591066	(27495556)	+	(CCGCGC)n	Simple_repeat	1	37	(0)	735149
14	17.5	2.4	2.4	chr11	107591296	107591336	(27495286)	+	(GAGCGCG)n	Simple_repeat	1	42	(0)	735150
20	8.9	5.7	5.4	chr11	107858872	107858924	(27227698)	+	(CGCT)n	Simple_repeat	1	56	(0)	735683
12	10.7	2.9	5.7	chr11	107859162	107859195	(27227427)	+	(GTGA)n	Simple_repeat	1	35	(0)	735684
14	7.8	0.0	6.5	chr11	107859229	107859259	(27227363)	+	(CCCT)n	Simple_repeat	1	31	(0)	735685
2406	8.2	1.0	0.0	chr11	107859304	107859608	(27227014)	+	AluSx1	SINE/Alu	1	308	(4)	735686
2293	12.8	0.7	0.0	chr11	108027274	108027571	(27059051)	C	AluSx1	SINE/Alu	(12)	300	1	736082
1783	11.9	10.7	3.1	chr11	108027572	108027705	(27058917)	C	AluSz6	SINE/Alu	(179)	133	2	736081
4577	28.9	10.1	3.9	chr11	108027706	108028556	(27058066)	+	L2a	LINE/L2	1919	2833	(586)	736079
2641	12.8	1.3	0.8	chr11	108602859	108603237	(26483385)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	737106
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
12	22.7	0.0	2.6	chr11	111602442	111602479	(23484143)	+	G-rich	Low_complexity	1	38	(0)	741647
14	23.3	0.0	2.4	chr11	111602500	111602541	(23484081)	+	(CCGC)n	Simple_repeat	1	42	(0)	741648
2832	16.9	1.2	2.2	chr11	112273617	112274235	(22812387)	+	L1PA10	LINE/L1	1	595	(5280)	742863
218	31.9	5.2	0.0	chr11	112632001	112632091	(22454531)	+	MIRb	SINE/MIR	150	245	(23)	743424
16	17.6	0.0	0.0	chr11	112632119	112632145	(22454477)	+	(T)n	Simple_repeat	1	27	(0)	743425
1086	26.7	7.6	1.3	chr11	112632146	112632452	(22454170)	C	LTR16C	LTR/ERVL	(33)	456	129	743426
183	34.6	0.0	5.8	chr11	112632542	112632627	(22453995)	+	L2c	LINE/L2	3269	3349	(38)	743421
17	31.1	0.0	0.0	chr11	113155822	113155878	(21930744)	+	(TCCCC)n	Simple_repeat	1	57	(0)	744174
11	21.3	2.5	2.4	chr11	114399551	114399590	(20687032)	+	(GGAAGAT)n	Simple_repeat	1	41	(0)	746214
13	17.8	0.0	2.9	chr11	115180331	115180364	(19906258)	+	A-rich	Low_complexity	1	34	(0)	747336
17	23.7	0.0	3.7	chr11	115504293	115504358	(19582264)	+	(CAGCCG)n	Simple_repeat	1	63	(0)	747726
2254	10.5	0.0	2.9	chr11	117294220	117294525	(17792097)	C	AluSq2	SINE/Alu	(16)	297	1	750894
2330	9.5	0.0	0.3	chr11	117294602	117294896	(17791726)	+	AluSq2	SINE/Alu	1	294	(19)	750895
215	34.6	1.3	1.3	chr11	117807525	117807603	(17279019)	+	MIRb	SINE/MIR	120	198	(70)	751803
1966	11.5	0.0	0.0	chr11	117807859	117808119	(17278503)	C	AluSg	SINE/Alu	(49)	261	1	751804
16	0.0	7.7	0.0	chr11	117947125	117947150	(17139472)	+	(CACTC)n	Simple_repeat	1	28	(0)	752024
17	20.8	5.2	1.6	chr11	119057209	119057266	(16029356)	+	(GCCCG)n	Simple_repeat	1	61	(0)	754173
675	33.5	12.4	5.0	chr11	119120360	119121078	(15965544)	C	L2c	LINE/L2	(73)	3314	2526	754272
25	15.6	0.0	1.9	chr11	119334698	119334749	(15751873)	+	(CGACC)n	Simple_repeat	1	52	(0)	754708
14	10.8	3.1	3.0	chr11	120062439	120062470	(15024152)	+	GA-rich	Low_complexity	1	33	(0)	755915
348	33.5	8.8	5.0	chr11	120289652	120290009	(14796613)	+	L2c	LINE/L2	3014	3386	(1)	756299
635	21.7	4.8	2.7	chr11	120324638	120324809	(14761813)	C	MIR	SINE/MIR	(13)	249	83	756366
213	25.9	17.6	3.6	chr11	120324915	120325026	(14761596)	+	L2b	LINE/L2	3268	3420	(6)	756367
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
472	32.9	1.2	0.0	chr11	120835892	120836049	(14250573)	+	Chap1_Mam	DNA/hAT-Charlie	2	161	(181)	757233
610	26.9	12.7	3.8	chr11	120836178	120836413	(14250209)	+	MIR	SINE/MIR	3	262	(0)	757234
1196	30.4	11.7	1.4	chr11	121029862	121030662	(14055960)	C	L2a	LINE/L2	(1)	3425	2525	757578
1745	25.3	4.6	8.4	chr11	121030715	121031653	(14054969)	C	L1ME3E	LINE/L1	(77)	6046	5158	757579
851	21.2	8.0	1.9	chr11	124706647	124706705	(10379917)	+	L1M5	LINE/L1	5273	5338	(785)	763444
1941	16.3	1.0	1.7	chr11	124706706	124707005	(10379617)	+	AluJr	SINE/Alu	2	299	(13)	763446
851	21.2	8.0	1.9	chr11	124707006	124707214	(10379408)	+	L1M5	LINE/L1	5339	5559	(564)	763444
328	23.4	3.8	1.3	chr11	124707243	124707320	(10379302)	C	LTR79	LTR/ERVL	(2)	525	446	763447
895	16.9	0.0	0.0	chr11	124707349	124707478	(10379144)	+	FLAM_C	SINE/Alu	1	130	(13)	763448
4333	25.6	9.7	6.0	chr11	124952024	124953627	(10132995)	+	L2a	LINE/L2	1685	3426	(0)	763813
20	10.8	0.0	0.0	chr11	128915369	128915398	(6171224)	+	(TG)n	Simple_repeat	1	30	(0)	769568
466	26.7	2.2	3.0	chr11	128915626	128915760	(6170862)	+	L2c	LINE/L2	3254	3387	(0)	769569
150	17.4	0.7	0.4	chr11	128915771	128916049	(6170573)	+	(ATGG)n	Simple_repeat	1	281	(0)	769570
50	0.0	0.0	0.0	chr11	128916103	128916147	(6170475)	+	(TGGA)n	Simple_repeat	1	45	(0)	769571
138	6.8	1.1	1.0	chr11	128916183	128916372	(6170250)	+	(TGGA)n	Simple_repeat	1	192	(0)	769571
218	25.4	8.3	0.3	chr11	129395763	129395852	(5690770)	+	MIR	SINE/MIR	15	110	(158)	770262
60	0.0	0.0	0.0	chr11	129923644	129923694	(5162928)	+	(GA)n	Simple_repeat	1	51	(0)	771000
23	15.4	2.5	4.9	chr11	130314765	130314825	(4771797)	+	G-rich	Low_complexity	1	59	(0)	771694
19	14.1	0.0	4.7	chr11	130314827	130314869	(4771753)	+	(GCC)n	Simple_repeat	1	43	(0)	771695
16	8.9	0.0	9.3	chr11	130314958	130315000	(4771622)	+	G-rich	Low_complexity	1	43	(0)	771696
22	26.5	0.0	1.4	chr11	131691728	131691796	(3394826)	+	G-rich	Low_complexity	1	69	(0)	773658
190	30.8	4.2	14.9	chr11	131691817	131691923	(3394699)	C	MIRb	SINE/MIR	(47)	221	127	773659
13	19.5	2.9	0.0	chr11	134036995	134037029	(1049593)	+	(CCCCG)n	Simple_repeat	1	36	(0)	776692
68	4.1	0.0	0.0	chr11	134037051	134037125	(1049497)	+	(ACTCTTCTCG)n	Simple_repeat	1	75	(0)	776693
18	18.3	1.6	6.2	chr11	134037391	134037453	(1049169)	+	G-rich	Low_complexity	1	64	(0)	776694
353	24.1	3.5	1.8	chr11	134037532	134037645	(1048977)	C	MIR3	SINE/MIR	(6)	202	87	776695
180	13.2	7.3	0.0	chr11	134139654	134139691	(946931)	+	L3	LINE/CR1	876	916	(3183)	776862
1697	10.2	15.1	0.4	chr11	134140155	134140409	(946213)	C	AluSq	SINE/Alu	(14)	299	1	776863
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
784	26.9	7.5	2.8	chr12	216850	217101	(133058208)	C	MIRb	SINE/MIR	(3)	265	1	778396
164	7.5	0.9	0.0	chr12	217203	217418	(133057891)	+	(TGGA)n	Simple_repeat	1	218	(0)	778397
908	16.2	6.7	0.0	chr12	511014	511209	(132764100)	C	AluJb	SINE/Alu	(0)	312	118	778880
1032	7.0	2.2	4.6	chr12	511220	513215	(132762094)	+	(ACCTTCC)n	Simple_repeat	1	2041	(0)	778881
1976	14.7	0.0	3.5	chr12	666439	666757	(132608552)	C	AluSz	SINE/Alu	(4)	308	1	779187
2296	9.8	0.3	0.0	chr12	1606637	1606933	(131668376)	+	AluSz	SINE/Alu	1	298	(14)	780943
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
1564	10.6	17.5	0.0	chr12	2813042	2813286	(130462023)	C	AluSx1	SINE/Alu	(15)	297	1	782699
20	21.7	4.3	5.1	chr12	2959652	2959745	(130315564)	+	(TCGCTCC)n	Simple_repeat	1	98	(0)	783022
17	3.4	6.7	0.0	chr12	2959797	2959826	(130315483)	+	(CTCCG)n	Simple_repeat	1	32	(0)	783023
940	11.5	0.0	0.0	chr12	3872817	3872946	(129402363)	+	AluSz6	SINE/Alu	174	303	(9)	784520
12	16.4	5.9	0.0	chr12	3873171	3873204	(129402105)	+	(CCCCG)n	Simple_repeat	1	36	(0)	784521
2348	9.4	0.0	0.0	chr12	5142678	5142975	(128132334)	C	AluSc	SINE/Alu	(7)	302	5	786592
1857	15.0	4.2	6.3	chr12	5142976	5143107	(128132202)	C	MSTA	LTR/ERVL-MaLR	(231)	197	74	786591
581	16.5	0.0	0.0	chr12	5143421	5143517	(128131792)	C	MSTA	LTR/ERVL-MaLR	(331)	97	1	786591
2371	4.4	0.0	0.0	chr12	5143584	5143856	(128131453)	+	AluY	SINE/Alu	35	307	(4)	786593
1118	21.2	1.4	0.4	chr12	6289807	6290071	(126985238)	C	L1M4	LINE/L1	(1090)	5056	4774	788404
2574	16.1	3.5	9.2	chr12	6291645	6292028	(126983281)	C	L1M4	LINE/L1	(1332)	4814	4424	788404
19	3.6	3.5	0.0	chr12	6363133	6363161	(126912148)	+	(TAA)n	Simple_repeat	1	30	(0)	788558
14	16.4	0.0	8.3	chr12	6363260	6363307	(126912002)	+	(TTATTT)n	Simple_repeat	1	48	(0)	788559
14	7.2	0.0	8.6	chr12	6363385	6363419	(126911890)	+	G-rich	Low_complexity	1	35	(0)	788560
15	19.6	5.1	2.0	chr12	6764579	6764639	(126510670)	+	GA-rich	Low_complexity	1	62	(0)	789348
887	17.9	1.8	3.0	chr12	6891808	6891975	(126383334)	+	AluJb	SINE/Alu	135	300	(12)	789582
389	30.4	8.0	1.4	chr12	7700780	7701002	(125574307)	+	L1M5	LINE/L1	5375	5613	(511)	790776
800	14.8	2.2	1.5	chr12	7701005	7701139	(125574170)	+	AluSz6	SINE/Alu	1	136	(176)	790777
487	17.7	0.0	1.3	chr12	7701172	7701250	(125574059)	+	AluJo	SINE/Alu	2	79	(233)	790778
900	9.7	0.0	0.8	chr12	7701299	7701422	(125573887)	+	AluJo	SINE/Alu	2	124	(188)	790779
13	0.0	5.0	0.0	chr12	7701503	7701522	(125573787)	+	(AAAC)n	Simple_repeat	1	21	(0)	790780
26	0.0	0.0	3.3	chr12	7936254	7936283	(125339026)	+	(CCCCA)n	Simple_repeat	1	30	(0)	791411
19	0.0	0.0	0.0	chr12	7936413	7936433	(125338876)	+	(T)n	Simple_repeat	1	21	(0)	791412
2030	12.8	1.4	0.3	chr12	8658067	8658355	(124616954)	+	AluSz	SINE/Alu	1	292	(20)	792660
15	21.4	1.6	6.3	chr12	8697834	8697897	(124577412)	+	(CGCCG)n	Simple_repeat	1	60	(0)	792746
5449	18.5	13.1	5.2	chr12	9065174	9066669	(124208640)	+	MER52D	LTR/ERV1	490	2121	(2)	793384
2397	4.8	0.0	2.8	chr12	10568286	10568575	(122706734)	C	AluYc	SINE/Alu	(16)	283	2	795361
216	28.0	0.0	0.0	chr12	12712565	12712614	(120562695)	+	L2c	LINE/L2	3106	3155	(232)	798623
16	19.7	2.1	2.0	chr12	12897486	12897533	(120377776)	+	GA-rich	Low_complexity	1	49	(0)	799022
2151	13.2	0.0	0.3	chr12	12897607	12897909	(120377400)	C	AluSx	SINE/Alu	(10)	302	1	799023
2413	16.6	8.1	0.8	chr12	12999144	12999624	(120275685)	C	MER44B	DNA/TcMar-Tigger	(0)	550	32	799224
12	16.8	0.0	0.0	chr12	13315706	13315732	(119959577)	+	A-rich	Low_complexity	1	27	(0)	799675
1011	28.3	6.5	4.2	chr12	13315835	13316266	(119959043)	C	L1ME4b	LINE/L1	(78)	814	372	799676
2223	11.3	0.0	2.2	chr12	14364588	14364905	(118910404)	C	AluSx	SINE/Alu	(1)	311	1	801267
286	30.6	11.0	2.3	chr12	14364916	14365089	(118910220)	C	MIRb	SINE/MIR	(60)	208	18	801268
24	25.9	3.3	2.1	chr12	14365688	14365778	(118909531)	+	(GCG)n	Simple_repeat	1	94	(0)	801269
5038	11.5	7.7	0.3	chr12	15688314	15689073	(117586236)	+	LTR1A2	LTR/ERV1	17	837	(0)	803141
2149	12.1	0.7	0.0	chr12	17097227	17097508	(116177801)	C	AluSx	SINE/Alu	(24)	288	5	805103
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
358	23.1	15.0	0.0	chr12	18698123	18698269	(114577040)	C	MER112	DNA/hAT-Charlie	(8)	253	81	806946
45	15.9	0.0	0.0	chr12	18698270	18698349	(114576960)	+	(CTATT)n	Simple_repeat	1	80	(0)	806947
13	16.3	0.0	5.3	chr12	21641868	21641905	(111633404)	+	A-rich	Low_complexity	1	38	(0)	811041
1063	25.2	9.3	5.6	chr12	25110275	25110935	(108164374)	+	L2a	LINE/L2	2727	3417	(9)	815978
2277	11.5	0.7	0.0	chr12	25333449	25333753	(107941556)	+	AluSq2	SINE/Alu	1	307	(6)	816329
281	25.4	0.0	0.0	chr12	25334067	25334125	(107941184)	+	MamRep1151	LTR?	3	61	(648)	816330
386	35.6	11.7	2.3	chr12	25458376	25458677	(107816632)	+	L2c	LINE/L2	3042	3375	(12)	816543
241	39.5	10.8	0.9	chr12	25615203	25615427	(107659882)	+	L3b	LINE/CR1	4546	4795	(437)	816728
1929	14.8	0.3	3.8	chr12	25615444	25615760	(107659549)	C	AluSz	SINE/Alu	(6)	306	1	816729
2006	22.1	15.9	4.0	chr12	26017261	26017915	(107257394)	C	LTR41	LTR/ERVL	(2)	766	19	817390
617	31.4	8.0	7.8	chr12	26112435	26112896	(107162413)	C	L2a	LINE/L2	(17)	3409	2947	817527
277	17.9	16.7	2.1	chr12	26113061	26113157	(107162152)	+	L2a	LINE/L2	3310	3423	(3)	817528
37279	7.3	0.7	0.2	chr12	26776000	26781630	(106493679)	+	HERVL-int	LTR/ERVL	1	5654	(0)	818454
189	20.8	4.0	0.0	chr12	26832755	26832802	(106442507)	+	Tigger19b	DNA/TcMar-Tigger	320	369	(181)	818544
12	8.9	4.2	0.0	chr12	26833030	26833053	(106442256)	+	(GCC)n	Simple_repeat	1	25	(0)	818545
19	8.2	0.0	0.0	chr12	26952088	26952113	(106323196)	+	(T)n	Simple_repeat	1	26	(0)	818748
1807	19.6	12.2	0.8	chr12	26967809	26968301	(106307008)	+	L2b	LINE/L2	2148	2704	(715)	818762
274	22.4	11.7	2.0	chr12	26968320	26968510	(106306799)	+	L1ME4c	LINE/L1	5730	5775	(349)	818763
5964	3.7	0.0	0.0	chr12	27040517	27041223	(106234086)	C	L1PA5	LINE/L1	(1)	6153	5447	818888
9973	6.4	0.6	0.0	chr12	27041224	27043552	(106231757)	+	L1P2	LINE/L1	1195	3521	(2625)	818889
16	3.4	6.2	2.9	chr12	28192343	28192374	(105082935)	+	(GGAGT)n	Simple_repeat	1	34	(0)	820740
2338	11.7	0.0	0.0	chr12	29590505	29590811	(103684498)	+	AluSg	SINE/Alu	1	307	(3)	822570
2457	9.7	0.8	1.7	chr12	29590812	29590967	(103684342)	+	LTR56	LTR/ERV1	293	445	(0)	822569
198	29.8	0.0	0.0	chr12	31369799	31369845	(101905464)	C	L2a	LINE/L2	(2)	3424	3378	825128
367	25.9	14.3	2.4	chr12	31370116	31370281	(101905028)	+	MIR3	SINE/MIR	17	205	(3)	825129
202	29.5	1.6	1.6	chr12	32283298	32283359	(100991950)	C	MIR	SINE/MIR	(183)	79	18	827195
39	2.4	0.0	2.2	chr12	32283360	32283404	(100991905)	+	(CCACT)n	Simple_repeat	1	45	(0)	827196
383	28.9	21.8	0.8	chr12	32283427	32283813	(100991496)	C	L2a	LINE/L2	(2106)	1313	823	827193
1822	19.0	0.7	0.0	chr12	32718955	32719249	(100556060)	C	AluJr	SINE/Alu	(15)	297	1	828002
13	21.2	2.6	0.0	chr12	32843856	32843893	(100431416)	+	A-rich	Low_complexity	1	39	(0)	828221
20	22.9	0.0	0.0	chr12	41774625	41774672	(91500637)	+	(ATAGA)n	Simple_repeat	1	48	(0)	835480
418	30.4	8.4	3.7	chr12	41774941	41775155	(91500154)	C	L3	LINE/CR1	(259)	3840	3615	835481
1408	29.7	5.5	2.6	chr12	42276594	42277136	(90998173)	+	LTR78	LTR/ERV1	745	1304	(0)	836330
7914	14.5	10.3	1.0	chr12	43015033	43016454	(90258855)	+	MSTA-int	LTR/ERVL-MaLR	3	1571	(9)	837508
2178	12.5	0.0	1.0	chr12	43837332	43837643	(89437666)	C	AluSg	SINE/Alu	(0)	310	2	838636
437	31.7	17.7	0.3	chr12	43975964	43976276	(89299033)	+	L3	LINE/CR1	3205	3583	(516)	838846
2525	11.9	9.3	1.7	chr12	43976280	43976747	(89298562)	C	LTR22E	LTR/ERVK	(0)	507	1	838847
347	31.6	16.5	0.7	chr12	45075789	45076059	(88199250)	C	L2	LINE/L2	(475)	2944	2623	840274
466	30.2	8.2	1.9	chr12	45076061	45076276	(88199033)	+	L4_C_Mam	LINE/RTE-X	4796	5026	(112)	840271
25	9.2	0.0	0.0	chr12	47904453	47904487	(85370822)	+	(A)n	Simple_repeat	1	35	(0)	844400
183	25.7	11.0	1.9	chr12	47904578	47904684	(85370625)	C	L3	LINE/CR1	(3138)	961	844	844401
476	23.6	12.1	0.8	chr12	48197502	48197625	(85077684)	+	Charlie15a	DNA/hAT-Charlie	47	186	(38)	844851
12	15.3	3.5	0.0	chr12	48957329	48957357	(84317952)	+	(CGC)n	Simple_repeat	1	30	(0)	846157
1147	12.2	0.0	1.1	chr12	48995164	48995346	(84279963)	C	MIRb	SINE/MIR	(15)	253	73	846233
1952	13.7	0.3	1.1	chr12	49192244	49192528	(84082781)	+	AluSz6	SINE/Alu	7	289	(23)	846621
184	33.7	1.1	1.1	chr12	49192793	49192882	(84082427)	+	L2	LINE/L2	1887	1976	(1443)	846622
27	0.0	3.5	0.0	chr12	49192897	49192925	(84082384)	+	(TTGT)n	Simple_repeat	1	30	(0)	846623
1863	13.7	4.9	0.0	chr12	49192926	49193195	(84082114)	C	AluSx1	SINE/Alu	(28)	284	1	846624
1806	25.1	14.1	2.9	chr12	49400057	49400864	(83874445)	C	L2a	LINE/L2	(1303)	2116	1298	847122
228	27.1	11.1	2.0	chr12	49690431	49690528	(83584781)	+	L2a	LINE/L2	3260	3367	(59)	847603
307	24.2	1.5	0.0	chr12	49690599	49690664	(83584645)	C	MIRb	SINE/MIR	(187)	81	15	847609
1621	12.8	8.5	0.0	chr12	49690812	49691060	(83584249)	+	AluJb	SINE/Alu	31	302	(10)	847610
1996	10.5	3.3	4.3	chr12	51316209	51316513	(81958796)	+	AluSx1	SINE/Alu	1	302	(10)	851111
232	34.6	8.4	5.5	chr12	51316580	51316889	(81958420)	+	L2b	LINE/L2	2940	3257	(130)	851109
2347	8.4	0.3	0.0	chr12	51316890	51317175	(81958134)	C	AluSp	SINE/Alu	(26)	287	1	851112
40888	8.3	1.8	0.6	chr12	51797116	51801772	(81473537)	C	HERVL-int	LTR/ERVL	(0)	5654	957	851920
596	24.1	2.8	5.8	chr12	51944783	51944922	(81330387)	C	L1MEd	LINE/L1	(4912)	2191	2024	852195
1352	14.7	3.9	0.0	chr12	51944923	51945147	(81330162)	C	Tigger4a	DNA/TcMar-Tigger	(1)	235	2	852196
2194	10.1	0.3	0.3	chr12	53012277	53012564	(80262745)	+	AluSp	SINE/Alu	5	292	(21)	853920
2393	8.0	0.6	1.0	chr12	53380938	53381251	(79894058)	C	AluSp	SINE/Alu	(0)	313	1	854632
13	20.3	0.0	4.7	chr12	53493035	53493077	(79782232)	+	G-rich	Low_complexity	1	43	(0)	854860
18	7.9	7.1	2.2	chr12	53677189	53677230	(79598079)	+	G-rich	Low_complexity	1	45	(0)	855237
18	19.8	9.2	4.6	chr12	53966206	53966328	(79308981)	+	(TCCCTCTC)n	Simple_repeat	1	128	(0)	855718
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
5144	20.9	3.6	3.0	chr12	54758781	54760506	(78514803)	C	L1MA4	LINE/L1	(4504)	3061	1340	856953
1688	17.9	0.3	5.4	chr12	54760507	54760819	(78514490)	C	AluJb	SINE/Alu	(15)	297	1	856958
2475	6.5	0.0	2.6	chr12	56098123	56098430	(77176879)	+	AluY	SINE/Alu	1	300	(11)	858910
15	11.5	0.0	3.2	chr12	56221859	56221889	(77053420)	+	(GGGAA)n	Simple_repeat	1	31	(0)	859117
28923	6.0	1.9	0.9	chr12	56398527	56400360	(76874949)	+	HERVL-int	LTR/ERVL	303	2118	(3536)	859469
12	13.7	6.2	0.0	chr12	56632475	56632506	(76642803)	+	(CCACAC)n	Simple_repeat	1	34	(0)	859930
248	41.1	2.3	3.8	chr12	56652720	56652982	(76622327)	+	L2	LINE/L2	654	912	(2507)	859961
186	35.3	4.6	0.5	chr12	56770264	56770451	(76504858)	+	L2b	LINE/L2	1825	2020	(1399)	860227
2556	12.9	6.4	1.8	chr12	57645652	57646121	(75629188)	+	MER4-int	LTR/ERV1	2791	3291	(3307)	861619
2249	11.0	1.6	0.0	chr12	57646122	57646420	(75628889)	C	AluSp	SINE/Alu	(9)	304	1	861628
2556	12.9	6.4	1.8	chr12	57646421	57646460	(75628849)	+	MER4-int	LTR/ERV1	3292	3329	(3269)	861619
26978	2.0	0.2	0.0	chr12	57646480	57652498	(75622811)	+	L1PA2	LINE/L1	125	6154	(1)	861629
241	35.1	6.3	5.0	chr12	62471741	62472037	(70803272)	C	L2	LINE/L2	(1681)	1738	1438	867978
2970	14.1	3.8	0.9	chr12	63418829	63419098	(69856211)	C	MER34C_	LTR/ERV1	(3)	582	295	869381
3170	8.3	1.0	14.5	chr12	63419099	63419690	(69855619)	+	LTR10F	LTR/ERV1	1	511	(0)	869382
550	24.0	7.6	0.0	chr12	63918766	63918911	(69356398)	C	L2a	LINE/L2	(0)	3426	3269	870195
1907	16.2	0.0	2.8	chr12	63919037	63919357	(69355952)	C	AluJb	SINE/Alu	(0)	312	1	870196
45998	6.1	0.7	0.9	chr12	64340412	64346075	(68929234)	C	HERVL-int	LTR/ERVL	(0)	5654	2	870939
367	25.9	9.5	2.5	chr12	64451139	64451273	(68824036)	C	MIRb	SINE/MIR	(109)	159	9	871145
17	7.5	6.2	5.9	chr12	64451496	64451543	(68823766)	+	(TAAGTTT)n	Simple_repeat	1	51	(0)	871146
392	31.2	12.1	0.0	chr12	65233051	65233241	(68042068)	C	MIR	SINE/MIR	(40)	228	4	872489
285	32.9	0.0	9.6	chr12	65233370	65233463	(68041846)	C	MIRb	SINE/MIR	(161)	107	23	872490
862	16.0	1.7	9.0	chr12	65944865	65945052	(67330257)	C	AluJo	SINE/Alu	(18)	294	121	873576
2491	6.7	0.0	0.7	chr12	66170196	66170494	(67104815)	C	AluSc8	SINE/Alu	(14)	297	1	873920
256	22.7	2.6	2.6	chr12	66714774	66714850	(66560459)	+	L2	LINE/L2	2533	2609	(810)	874777
53	6.8	0.0	6.6	chr12	66714866	66714971	(66560338)	+	(CCAT)n	Simple_repeat	1	106	(0)	874778
14	21.6	4.2	5.4	chr12	66804439	66804509	(66470800)	+	A-rich	Low_complexity	1	74	(0)	874927
750	27.2	7.8	2.3	chr12	68040349	68040588	(65234721)	+	MIR	SINE/MIR	3	268	(0)	876788
983	28.4	6.4	0.5	chr12	68040889	68041256	(65234053)	C	MLT1G1	LTR/ERVL-MaLR	(188)	391	1	876789
14838	13.4	2.3	1.4	chr12	68205253	68207583	(65067726)	C	Tigger2	DNA/TcMar-Tigger	(10)	2708	356	877013
2145	8.6	1.7	2.3	chr12	68807302	68807602	(64467707)	C	AluSx1	SINE/Alu	(13)	299	1	878135
2023	29.8	7.9	2.1	chr12	68918119	68918594	(64356715)	+	L2b	LINE/L2	2096	2601	(818)	878347
52	6.6	0.0	0.0	chr12	68918595	68918659	(64356650)	+	(TCCAA)n	Simple_repeat	1	65	(0)	878348
2023	28.7	9.3	8.0	chr12	68918660	68919469	(64355840)	+	L2b	LINE/L2	2602	3390	(36)	878347
16	13.3	3.0	0.0	chr12	69240134	69240166	(64035143)	+	(CCG)n	Simple_repeat	1	34	(0)	878961
275	26.0	18.7	3.9	chr12	69585014	69585221	(63690088)	+	HAL1	LINE/L1	2256	2501	(6)	879550
488	26.2	1.5	5.1	chr12	69639160	69639296	(63636013)	+	FordPrefect_a	DNA/hAT-Tip100	62	193	(315)	879650
326	19.6	0.0	0.0	chr12	69639359	69639409	(63635900)	+	FordPrefect_a	DNA/hAT-Tip100	414	464	(44)	879651
14	26.2	1.7	3.4	chr12	70243653	70243710	(63031599)	+	GA-rich	Low_complexity	1	59	(0)	880616
14	23.2	3.9	1.9	chr12	70243682	70243733	(63031576)	+	(GGT)n	Simple_repeat	1	54	(0)	880617
2128	6.7	0.4	0.0	chr12	71574071	71574323	(61700986)	+	AluSx3	SINE/Alu	50	303	(8)	882515
1556	28.1	6.6	4.6	chr12	71652888	71653733	(61621576)	+	L1ME1	LINE/L1	882	1745	(5612)	882626
4893	13.5	4.5	0.8	chr12	71731559	71732363	(61542946)	+	LTR1A2	LTR/ERV1	1	837	(0)	882763
2302	13.3	7.1	2.3	chr12	71732364	71732529	(61542780)	C	LTR47A	LTR/ERVL	(286)	166	1	882761
2106	10.9	0.7	1.3	chr12	71839102	71839403	(61435906)	+	AluSx	SINE/Alu	1	300	(12)	882972
290	32.8	10.1	0.7	chr12	71839404	71839458	(61435851)	C	MIRc	SINE/MIR	(200)	68	6	882971
702	28.0	14.4	1.6	chr12	72196605	72196923	(61078386)	+	L2a	LINE/L2	1538	1904	(1515)	883509
291	31.6	2.8	7.6	chr12	72196926	72197189	(61078120)	+	L2-3_Crp	LINE/L2	722	972	(1124)	883510
867	29.6	8.9	0.9	chr12	72197195	72197515	(61077794)	+	L2a	LINE/L2	3076	3424	(2)	883509
722	4.6	0.0	0.0	chr12	72640665	72640751	(60634558)	C	L1PA3	LINE/L1	(6067)	88	2	884060
15	7.9	3.7	0.0	chr12	72640826	72640852	(60634457)	+	(AATT)n	Simple_repeat	1	28	(0)	884061
36279	10.8	1.5	0.5	chr12	75372313	75377281	(57898028)	C	HERVL-int	LTR/ERVL	(620)	5034	1	887450
1661	20.2	5.4	2.0	chr12	76868993	76869386	(56405923)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	889982
261	25.8	0.0	7.0	chr12	76869387	76869432	(56405877)	+	MLT1K	LTR/ERVL-MaLR	139	180	(415)	889981
2464	28.0	6.7	5.2	chr12	77109963	77110423	(56164886)	C	HAL1	LINE/L1	(0)	2507	2073	890383
2566	10.5	0.8	0.3	chr12	77110424	77110785	(56164524)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	890384
681	31.4	7.3	3.8	chr12	78235048	78235446	(55039863)	C	L2a	LINE/L2	(108)	3318	2646	891875
1783	15.9	11.4	1.9	chr12	78235480	78235851	(55039458)	+	MLT2C2	LTR/ERVL	5	416	(48)	891877
493	16.8	0.0	5.3	chr12	79617609	79617721	(53657588)	C	L1MA6	LINE/L1	(1)	6299	6193	893748
1232	16.8	9.7	7.2	chr12	79617727	79618099	(53657210)	+	MSTB	LTR/ERVL-MaLR	1	421	(5)	893749
1431	11.8	7.4	3.7	chr12	79618102	79618122	(53657187)	C	L1MA6	LINE/L1	(110)	6190	6177	893748
2175	13.7	0.7	0.0	chr12	79618123	79618428	(53656881)	C	AluSz6	SINE/Alu	(4)	308	1	893750
80	2.6	8.4	0.0	chr12	79639802	79639920	(53635389)	+	(TTCCTA)n	Simple_repeat	1	129	(0)	893789
2013	13.6	0.7	0.0	chr12	79639923	79640202	(53635107)	C	AluSx1	SINE/Alu	(30)	282	1	893790
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
29	26.9	3.4	0.0	chr12	91321324	91321412	(41953897)	+	(AT)n	Simple_repeat	1	92	(0)	909785
15	20.0	2.5	0.0	chr12	93838201	93838214	(39437095)	+	(TTTTCT)n	Simple_repeat	1	40	(0)	914206
21	4.2	0.0	0.0	chr12	93838215	93838239	(39437070)	+	(T)n	Simple_repeat	1	25	(0)	914207
31	2.7	2.6	0.0	chr12	93838385	93838422	(39436887)	+	(CACTCCACT)n	Simple_repeat	1	39	(0)	914208
25	16.9	0.0	0.0	chr12	93838497	93838544	(39436765)	+	(CCCT)n	Simple_repeat	1	48	(0)	914209
19	36.7	0.0	2.3	chr12	93838545	93838582	(39436727)	+	(CCTT)n	Simple_repeat	1	86	(0)	914210
999	5.0	0.0	0.0	chr12	95073939	95074059	(38201250)	C	L1PA5	LINE/L1	(0)	6154	6034	916458
1914	17.0	1.3	1.7	chr12	95117422	95117721	(38157588)	C	AluJb	SINE/Alu	(8)	304	6	916542
2441	10.1	0.3	0.0	chr12	95117764	95118061	(38157248)	+	AluSg	SINE/Alu	3	301	(9)	916543
1396	25.6	3.5	10.2	chr12	96043675	96044020	(37231289)	C	L2	LINE/L2	(647)	2772	2462	918315
853	13.7	0.0	0.8	chr12	96044021	96044144	(37231165)	C	FLAM_C	SINE/Alu	(19)	124	2	918316
1396	25.6	3.5	10.2	chr12	96044145	96044288	(37231021)	C	L2	LINE/L2	(958)	2461	2316	918315
304	27.1	2.0	0.0	chr12	96044289	96044384	(37230925)	C	L2	LINE/L2	(1207)	2212	2115	918315
191	26.3	5.0	9.5	chr12	101698633	101698716	(31576593)	C	L3	LINE/CR1	(2270)	1829	1750	927781
1492	12.0	0.0	2.3	chr12	101699085	101699301	(31576008)	C	AluSx	SINE/Alu	(14)	298	87	927782
3366	9.3	2.7	3.9	chr12	104272070	104272514	(29002795)	C	LTR10F	LTR/ERV1	(0)	511	72	932241
2415	7.6	1.0	0.3	chr12	104272515	104272817	(29002492)	+	AluY	SINE/Alu	3	307	(4)	932242
16	20.7	2.2	2.1	chr12	104457113	104457158	(28818151)	+	(GGC)n	Simple_repeat	1	47	(0)	932618
18	15.3	0.0	2.6	chr12	104457138	104457175	(28818134)	+	GA-rich	Low_complexity	1	38	(0)	932619
13	20.4	4.3	2.0	chr12	104457323	104457369	(28817940)	+	G-rich	Low_complexity	1	49	(0)	932620
25	12.2	0.0	0.0	chr12	104457786	104457822	(28817487)	+	(T)n	Simple_repeat	1	37	(0)	932621
2745	3.2	0.0	1.3	chr12	107686686	107686999	(25588310)	+	AluY	SINE/Alu	2	311	(0)	938706
610	24.7	5.1	3.2	chr12	107687381	107687535	(25587774)	C	MER5B	DNA/hAT-Charlie	(19)	159	2	938707
518	18.2	2.0	0.2	chr12	109808703	109809711	(23465598)	+	(CCAT)n	Simple_repeat	1	1029	(0)	943352
12	5.6	0.0	0.0	chr12	109996273	109996291	(23279018)	+	(GGC)n	Simple_repeat	1	19	(0)	943774
1310	10.9	0.6	0.0	chr12	110060057	110060231	(23215078)	+	AluSp	SINE/Alu	113	288	(25)	943899
1385	32.0	4.0	10.8	chr12	110060237	110060753	(23214556)	+	L2	LINE/L2	1817	2353	(1066)	943900
1951	10.0	0.4	0.0	chr12	110060754	110061003	(23214306)	+	AluSx1	SINE/Alu	1	251	(61)	943901
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
1475	16.7	10.8	0.4	chr12	112418286	112418543	(20856766)	C	AluJb	SINE/Alu	(24)	288	1	949168
373	23.0	2.9	9.9	chr12	112418544	112418648	(20856661)	C	MIR	SINE/MIR	(110)	152	56	949169
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
36	2.7	0.0	0.0	chr12	113080590	113080627	(20194682)	+	(GAATG)n	Simple_repeat	1	38	(0)	950746
12	8.7	0.0	3.6	chr12	113080628	113080649	(20194660)	+	(GAATA)n	Simple_repeat	1	21	(0)	950747
1954	15.0	0.7	0.3	chr12	113080696	113080989	(20194320)	+	AluJo	SINE/Alu	3	297	(15)	950748
1803	16.9	1.0	1.0	chr12	113098732	113099033	(20176276)	+	AluJr	SINE/Alu	2	303	(9)	950789
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
365	12.7	3.7	8.1	chr12	115388183	115388236	(17887073)	C	LTR50	LTR/ERVL	(2)	793	742	955910
2465	13.1	10.8	0.5	chr12	115388237	115388619	(17886690)	+	MSTA	LTR/ERVL-MaLR	1	427	(1)	955911
274	34.0	8.9	4.9	chr12	115736428	115736631	(17538678)	C	MIRb	SINE/MIR	(8)	260	48	956673
404	30.4	9.7	3.4	chr12	115736851	115737112	(17538197)	+	L2c	LINE/L2	2522	2801	(618)	956674
278	32.1	6.5	1.9	chr12	115917564	115917725	(17357584)	C	L2c	LINE/L2	(250)	3137	2968	957073
438	13.1	0.0	4.5	chr12	116040656	116040743	(17234566)	+	L1M5	LINE/L1	5728	5811	(362)	957272
209	38.7	4.0	2.0	chr12	116175892	116176086	(17099223)	C	L2	LINE/L2	(969)	2450	2252	957470
604	23.5	2.8	15.4	chr12	116176123	116176388	(17098921)	+	MIR	SINE/MIR	13	251	(11)	957471
28	0.0	0.0	0.0	chr12	116176396	116176421	(17098888)	+	(CAT)n	Simple_repeat	1	26	(0)	957472
12	25.6	2.1	2.0	chr12	116176422	116176469	(17098840)	+	A-rich	Low_complexity	1	49	(0)	957473
2321	8.4	0.0	1.7	chr12	116270146	116270443	(17004866)	C	AluSc	SINE/Alu	(15)	294	2	957612
12	10.0	0.0	0.0	chr12	116276617	116276638	(16998671)	+	(AGGC)n	Simple_repeat	1	22	(0)	957621
145	15.9	5.0	0.6	chr12	116295360	116295677	(16979632)	+	(ATGG)n	Simple_repeat	1	334	(0)	957672
3757	12.0	4.5	2.9	chr12	116733484	116733874	(16541435)	+	Tigger3	DNA/TcMar-Tigger	2332	2741	(288)	958791
2279	11.3	0.0	0.0	chr12	116733875	116734176	(16541133)	C	AluSz6	SINE/Alu	(10)	302	1	958793
441	25.6	2.9	1.0	chr12	116788740	116789993	(16485316)	+	(TGGA)n	Simple_repeat	1	1290	(0)	958930
458	31.2	5.2	7.6	chr12	116839034	116839310	(16435999)	+	L2c	LINE/L2	3118	3387	(0)	959074
128	33.0	0.8	2.0	chr12	116839311	116839802	(16435507)	+	(GGAT)n	Simple_repeat	1	496	(0)	959075
31	5.0	2.4	0.0	chr12	117469909	117469950	(15805359)	+	(TCCA)n	Simple_repeat	1	43	(0)	960431
106	26.6	3.1	1.6	chr12	117469965	117470193	(15805116)	+	(CATC)n	Simple_repeat	1	231	(0)	960432
39	0.0	0.0	0.0	chr12	117470194	117470229	(15805080)	+	(ATCC)n	Simple_repeat	1	36	(0)	960433
106	26.6	3.1	1.6	chr12	117470230	117470353	(15804956)	+	(CATC)n	Simple_repeat	4	131	(0)	960434
27	7.5	2.3	0.0	chr12	117470387	117470429	(15804880)	+	(ATCC)n	Simple_repeat	1	44	(0)	960435
348	26.8	20.7	5.7	chr12	117875661	117875977	(15399332)	+	L2a	LINE/L2	3039	3415	(11)	961275
15	9.8	0.0	0.0	chr12	117882354	117882375	(15392934)	+	(AC)n	Simple_repeat	1	22	(0)	961294
270	29.0	0.0	1.6	chr12	117882407	117882469	(15392840)	+	L3	LINE/CR1	4033	4094	(5)	961295
330	19.0	0.0	0.3	chr12	117882489	117883119	(15392190)	+	(CCAT)n	Simple_repeat	1	631	(0)	961296
2185	12.4	0.3	0.0	chr12	119239897	119240202	(14035107)	C	AluSx	SINE/Alu	(5)	307	1	964323
2113	18.5	8.8	11.4	chr12	119240203	119240653	(14034656)	+	MLT2B4	LTR/ERVL	117	556	(0)	964322
250	23.9	4.1	0.0	chr12	119240658	119240728	(14034581)	+	MIRb	SINE/MIR	114	187	(81)	964321
276	24.3	18.4	4.2	chr12	119240746	119240951	(14034358)	C	L2b	LINE/L2	(133)	3254	3013	964324
1507	4.5	0.0	0.0	chr12	119668966	119669142	(13606167)	+	AluYh7	SINE/Alu	131	307	(4)	965296
17	3.3	6.1	2.9	chr12	120116651	120116683	(13158626)	+	(GGCG)n	Simple_repeat	1	35	(0)	966261
15	27.2	1.6	3.2	chr12	120116778	120116838	(13158471)	+	(CCT)n	Simple_repeat	1	62	(0)	966262
250	29.3	2.4	1.6	chr12	120489243	120489367	(12785942)	+	L2-1_AMi	LINE/L2	420	545	(690)	967205
947	26.1	5.9	5.0	chr12	120489373	120489749	(12785560)	+	L2a	LINE/L2	2526	3213	(213)	967204
2278	9.1	0.3	1.7	chr12	120489750	120490047	(12785262)	C	AluSx3	SINE/Alu	(17)	294	1	967206
417	28.9	11.8	2.5	chr12	120535127	120535325	(12739984)	C	MIR	SINE/MIR	(40)	222	3	967328
833	26.8	5.4	6.6	chr12	120889283	120889741	(12385568)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	968045
305	13.4	1.4	0.4	chr12	120987987	120988497	(12286812)	+	(TCCA)n	Simple_repeat	1	518	(0)	968311
1439	7.4	1.1	1.1	chr12	121614660	121614848	(11660461)	+	AluYh3	SINE/Alu	122	310	(1)	969829
2056	11.1	7.7	0.0	chr12	121614849	121615182	(11660127)	C	MSTA	LTR/ERVL-MaLR	(59)	369	8	969825
421	16.9	2.6	0.2	chr12	121615167	121615262	(11660047)	C	MLT1C	LTR/ERVL-MaLR	(301)	166	64	969822
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
793	11.6	0.0	0.0	chr12	121861917	121862028	(11413281)	+	AluJo	SINE/Alu	190	301	(11)	970498
1231	21.6	1.1	2.3	chr12	121862030	121862294	(11413015)	+	MER68-int	LTR/ERVL	1278	1539	(1451)	970497
2245	8.9	0.3	0.0	chr12	121862295	121862596	(11412713)	C	AluSq2	SINE/Alu	(10)	303	1	970499
573	22.4	1.0	6.8	chr12	121888204	121888402	(11386907)	C	MIR	SINE/MIR	(2)	228	42	970591
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
3686	18.3	6.2	2.2	chr12	122102147	122103015	(11172294)	+	L1MB8	LINE/L1	5196	6122	(56)	971100
1652	12.3	0.0	13.5	chr12	122103016	122103199	(11172110)	C	AluJb	SINE/Alu	(24)	288	126	971101
558	24.0	6.6	12.4	chr12	122296625	122296717	(10978592)	+	L1MC5	LINE/L1	9064	9151	(153)	971502
1000	18.3	1.2	0.0	chr12	122296718	122296881	(10978428)	+	FRAM	SINE/Alu	1	166	(10)	971503
558	24.0	6.6	12.4	chr12	122296882	122297044	(10978265)	+	L1MC5	LINE/L1	9152	9304	(0)	971502
2159	9.3	0.3	4.8	chr12	122464667	122464978	(10810331)	+	AluSx3	SINE/Alu	1	298	(13)	971921
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
19	13.3	2.3	2.3	chr12	122966098	122966140	(10309169)	+	(GCTGCGG)n	Simple_repeat	1	44	(0)	973066
829	10.4	0.0	7.5	chr12	123233964	123234097	(10041212)	C	FLAM_C	SINE/Alu	(15)	128	5	973592
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
76	22.7	5.8	1.8	chr12	123670490	123670609	(9604700)	+	(TA)n	Simple_repeat	1	122	(0)	974681
909	12.8	5.1	0.0	chr12	123670850	123670997	(9604312)	C	L1PA15	LINE/L1	(8)	6157	6002	974682
1436	0.0	7.5	0.0	chr12	125409559	125411209	(7864100)	+	(AGTGG)n	Simple_repeat	1	1775	(0)	978195
2079	6.7	0.0	1.5	chr12	125411252	125411524	(7863785)	+	L1PA7	LINE/L1	5884	6152	(2)	978196
1173	20.2	4.9	1.2	chr12	131587991	131588246	(1687063)	+	MLT1A0	LTR/ERVL-MaLR	96	361	(4)	988305
264	19.8	0.0	0.2	chr12	131588249	131588744	(1686565)	+	(GAATG)n	Satellite	1	496	(0)	988309
360	32.9	4.7	0.0	chr12	131631210	131631352	(1643957)	+	L2b	LINE/L2	3226	3375	(0)	988362
57	33.6	1.3	0.8	chr12	131631356	131631501	(1643808)	+	(TGGA)n	Simple_repeat	1	147	(0)	988365
100	4.7	0.0	0.0	chr12	131631502	131631611	(1643698)	+	(TGGATGGA)n	Simple_repeat	1	110	(0)	988366
57	33.6	1.3	0.8	chr12	131631612	131631696	(1643613)	+	(TGGA)n	Simple_repeat	4	89	(0)	988367
2342	7.6	1.6	1.3	chr12	131860112	131860414	(1414895)	+	AluY	SINE/Alu	1	304	(7)	988707
45	7.9	3.3	4.9	chr12	131860426	131860517	(1414792)	+	A-rich	Low_complexity	1	90	(0)	988708
14	9.7	5.7	2.7	chr12	131860791	131860825	(1414484)	+	G-rich	Low_complexity	1	37	(0)	988709
3590	11.4	0.0	0.4	chr12	132210901	132211438	(1063871)	+	HSMAR1	DNA/TcMar-Mariner	751	1286	(1)	989222
232	37.5	6.1	0.8	chr12	132211642	132211875	(1063434)	C	MIRb	SINE/MIR	(16)	252	6	989223
404	25.7	1.1	1.0	chr12	132217116	132218162	(1057147)	+	(CATC)n	Simple_repeat	1	1059	(0)	989228
535	24.9	0.2	0.4	chr12	132313039	132314253	(961056)	+	(CACC)n	Simple_repeat	1	1217	(0)	989320
390	30.0	0.6	0.2	chr12	132401279	132402373	(872936)	+	(CCAC)n	Simple_repeat	1	1101	(0)	989411
355	24.4	20.8	0.0	chr12	132428200	132428408	(846901)	C	L2a	LINE/L2	(661)	2758	2495	989442
348	23.5	1.1	0.5	chr12	132518212	132519013	(756296)	+	(ATCC)n	Simple_repeat	1	811	(0)	989556
324	29.5	12.1	6.6	chr12	132519122	132519355	(755954)	C	L2b	LINE/L2	(14)	3373	3137	989557
1659	19.2	10.7	5.2	chr12	132617669	132618134	(657175)	+	L1MB5	LINE/L1	5672	6166	(8)	989680
22	16.3	0.0	0.0	chr12	132618225	132618260	(657049)	+	A-rich	Low_complexity	1	36	(0)	989681
1939	12.7	10.5	1.8	chr12	132985525	132985862	(289447)	C	LTR8A	LTR/ERV1	(356)	371	1	990298
506	27.5	6.3	1.3	chr12	132985913	132986063	(289246)	C	L1MB7	LINE/L1	(3665)	2550	2392	990290
3692	9.8	7.8	0.2	chr12	133079464	133079975	(195334)	+	MER41A	LTR/ERV1	1	554	(0)	990480
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
16	11.7	0.0	0.0	chr13	19958702	19958735	(94405593)	+	(CCT)n	Simple_repeat	1	34	(0)	993492
20	16.3	0.0	0.0	chr13	19958915	19958955	(94405373)	+	(CGGAGG)n	Simple_repeat	1	41	(0)	993493
13	14.7	3.3	0.0	chr13	19959005	19959034	(94405294)	+	(CCG)n	Simple_repeat	1	31	(0)	993494
2356	9.1	0.7	0.0	chr13	20883768	20884065	(93480263)	C	AluSp	SINE/Alu	(13)	300	1	995014
1527	17.3	3.1	4.4	chr13	20884093	20884387	(93479941)	+	AluJo	SINE/Alu	1	291	(21)	995015
33	8.9	0.0	0.0	chr13	20884396	20884444	(93479884)	+	(AATCC)n	Simple_repeat	1	49	(0)	995016
1650	17.5	0.4	1.5	chr13	20884445	20884712	(93479616)	C	AluJb	SINE/Alu	(47)	265	1	995017
715	20.4	0.0	0.0	chr13	20884737	20884849	(93479479)	+	AluJo	SINE/Alu	170	282	(30)	995018
13	21.8	2.7	0.0	chr13	21671291	21671327	(92693001)	+	(TTA)n	Simple_repeat	1	38	(0)	996500
154	4.4	0.5	3.4	chr13	21743342	21743545	(92620783)	+	(ATCC)n	Simple_repeat	1	205	(0)	996608
1034	30.7	5.0	4.3	chr13	21743554	21744217	(92620111)	+	L2a	LINE/L2	2772	3426	(0)	996609
14474	15.5	3.6	0.3	chr13	22017304	22019539	(92344789)	+	Tigger4	DNA/TcMar-Tigger	354	2663	(68)	996965
1343	12.9	0.5	7.8	chr13	23382784	23383015	(90981313)	C	AluJr	SINE/Alu	(13)	299	85	998763
31	3.3	0.0	0.0	chr13	24694862	24694892	(89669436)	+	(CA)n	Simple_repeat	1	31	(0)	1000654
236	29.5	19.4	0.6	chr13	24695014	24695180	(89669148)	C	MIRc	SINE/MIR	(55)	213	8	1000655
2301	10.4	0.0	0.0	chr13	27202929	27203226	(87161102)	+	AluSx4	SINE/Alu	1	298	(12)	1004510
2726	28.7	4.7	2.7	chr13	27203227	27203628	(87160700)	+	ERVL-E-int	LTR/ERVL	4516	4935	(732)	1004506
1065	11.5	0.0	3.4	chr13	27348136	27348283	(87016045)	C	AluJr	SINE/Alu	(34)	278	136	1004784
209	27.4	0.0	0.0	chr13	27348287	27348337	(87015991)	+	MamGypsy2-LTR	LTR/Gypsy	44	94	(89)	1004785
277	27.1	10.9	5.0	chr13	27348447	27348644	(87015684)	C	L2	LINE/L2	(914)	2505	2295	1004786
2665	3.3	0.0	0.0	chr13	28084695	28084993	(86279335)	+	AluY	SINE/Alu	2	300	(11)	1006078
1958	26.5	2.0	8.2	chr13	28084994	28085064	(86279264)	C	L1MEc	LINE/L1	(3392)	2927	2869	1006077
2244	10.4	1.0	0.7	chr13	28085065	28085373	(86278955)	+	AluSx3	SINE/Alu	2	311	(0)	1006079
21969	12.1	2.2	1.3	chr13	28688078	28694338	(85669990)	C	L1PA7	LINE/L1	(0)	6339	12	1007171
1110	15.8	4.5	1.0	chr13	28694347	28694667	(85669661)	C	L1PBa	LINE/L1	(3959)	2907	2521	1007170
2125	18.8	3.5	4.5	chr13	28730606	28731073	(85633255)	C	MLT1C	LTR/ERVL-MaLR	(4)	463	1	1007237
7829	21.3	5.0	1.9	chr13	29095425	29097395	(85266933)	C	L1M4b	LINE/L1	(4822)	2045	11	1007726
383	34.5	5.3	1.4	chr13	29519831	29519974	(84844354)	C	MIRc	SINE/MIR	(117)	151	2	1008263
109	14.6	3.1	1.7	chr13	29519988	29520210	(84844118)	+	(CATC)n	Simple_repeat	1	230	(0)	1008264
222	31.3	6.9	7.4	chr13	29520236	29520411	(84843917)	C	L2b	LINE/L2	(55)	3320	3146	1008265
1798	12.0	7.8	0.4	chr13	30585410	30585683	(83778645)	+	AluSz	SINE/Alu	5	300	(12)	1010009
576	27.3	9.3	5.2	chr13	30585772	30586038	(83778290)	+	L2	LINE/L2	1750	2028	(1391)	1010010
910	16.6	7.0	1.8	chr13	30586061	30586223	(83778105)	C	AluJb	SINE/Alu	(9)	303	132	1010011
2978	28.8	15.3	7.9	chr13	30663743	30664420	(83699908)	C	L2a	LINE/L2	(402)	3017	2256	1010153
281	29.1	11.6	1.7	chr13	30870056	30870253	(83494075)	+	MIRc	SINE/MIR	19	234	(34)	1010521
16	18.1	5.8	1.8	chr13	32586783	32586834	(81777494)	+	G-rich	Low_complexity	1	55	(0)	1013053
240	15.4	0.0	0.0	chr13	32844050	32844088	(81520240)	C	MER65A	LTR/ERV1	(492)	39	1	1013429
369	32.1	11.9	4.5	chr13	32851520	32851829	(81512499)	C	L2c	LINE/L2	(1)	3386	3051	1013440
1057	31.0	5.3	9.5	chr13	32851970	32852621	(81511707)	+	L1MEd	LINE/L1	8	630	(6456)	1013441
2100	26.2	8.2	1.7	chr13	32982205	32983025	(81381303)	+	L1ME5	LINE/L1	5208	6086	(108)	1013651
9868	14.8	2.3	0.6	chr13	34989656	34991257	(79373071)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1016598
18	21.6	2.1	0.0	chr13	39603217	39603264	(74761064)	+	(CCTCC)n	Simple_repeat	1	49	(0)	1022860
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
20	6.3	0.0	5.4	chr13	41263790	41263826	(73100502)	+	(GGGA)n	Simple_repeat	1	37	(0)	1025541
3461	13.9	7.4	4.8	chr13	41268576	41269185	(73095143)	C	MER4B-int	LTR/ERV1	(2943)	3655	3021	1025556
2288	11.5	0.6	0.6	chr13	41269186	41269497	(73094831)	C	AluSq2	SINE/Alu	(1)	312	1	1025558
647	19.5	4.5	1.3	chr13	43830369	43830519	(70533809)	C	LTR16A2	LTR/ERVL	(3)	492	337	1029400
185	31.7	8.2	7.4	chr13	44350198	44350534	(70013794)	+	L2c	LINE/L2	3044	3383	(4)	1030156
16	21.6	0.0	0.0	chr13	44436971	44437002	(69927326)	+	(C)n	Simple_repeat	1	32	(0)	1030298
2510	4.6	1.9	0.7	chr13	44628027	44628329	(69735999)	+	AluY	SINE/Alu	1	307	(4)	1030629
1296	17.9	8.4	2.2	chr13	44628330	44628416	(69735912)	+	MSTA	LTR/ERVL-MaLR	200	288	(140)	1030628
719	14.8	0.0	0.9	chr13	44628566	44628674	(69735654)	C	U13	snRNA	(0)	108	1	1030630
2059	15.6	0.3	0.3	chr13	44628676	44628982	(69735346)	C	AluJb	SINE/Alu	(5)	307	1	1030631
247	27.9	7.9	6.5	chr13	45670987	45671124	(68693204)	C	MIRc	SINE/MIR	(0)	268	129	1032643
23	20.5	4.4	4.2	chr13	49220073	49220163	(65144165)	+	G-rich	Low_complexity	1	95	(0)	1037997
14	23.7	1.9	3.6	chr13	49220195	49220248	(65144080)	+	(GCGCA)n	Simple_repeat	1	55	(0)	1037998
13	21.9	2.3	2.2	chr13	49285475	49285499	(65078829)	+	(TTTTCT)n	Simple_repeat	2	26	(0)	1038126
215	32.6	3.2	2.1	chr13	49285587	49285680	(65078648)	+	MIR3	SINE/MIR	50	144	(64)	1038127
9907	12.7	7.6	1.3	chr13	50051869	50053333	(64310995)	+	Tigger2	DNA/TcMar-Tigger	1164	2717	(1)	1039565
1015	20.5	1.8	0.4	chr13	50529757	50529981	(63834347)	+	L1ME1	LINE/L1	5952	6179	(0)	1040258
2461	17.8	4.2	0.8	chr13	52355788	52356396	(62007932)	+	L1MB1	LINE/L1	4846	5468	(712)	1042972
3349	20.7	4.2	5.0	chr13	52356397	52357200	(62007128)	+	MER21C	LTR/ERVL	6	895	(43)	1042973
21	20.9	1.6	3.1	chr13	52851310	52851373	(61512955)	+	(GGAGCCG)n	Simple_repeat	1	65	(0)	1043783
1218	25.9	7.3	6.0	chr13	53768756	53769128	(60595200)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	121	1045095
1623	22.0	0.0	0.3	chr13	53769129	53769428	(60594900)	C	AluJr	SINE/Alu	(13)	299	1	1045096
41684	9.1	0.6	1.0	chr13	55447653	55452354	(58911974)	+	HERVL-int	LTR/ERVL	966	5654	(0)	1047182
40223	9.2	1.2	0.5	chr13	55586571	55591975	(58772353)	C	HERVL-int	LTR/ERVL	(0)	5654	207	1047359
1161	27.8	10.4	2.0	chr13	62642638	62642893	(51721435)	+	MLT2B2	LTR/ERVL	1	283	(232)	1056258
2740	6.7	3.1	23.0	chr13	62642894	62643536	(51720792)	+	LTR10F	LTR/ERV1	1	511	(0)	1056259
2639	32.2	15.2	1.8	chr13	63622585	63623741	(50740587)	C	L2	LINE/L2	(541)	2878	1595	1057518
2169	10.8	2.0	0.3	chr13	63623742	63624037	(50740291)	+	AluSc	SINE/Alu	1	301	(8)	1057519
13131	16.5	2.7	2.1	chr13	63982831	63985188	(50379140)	C	Tigger1	DNA/TcMar-Tigger	(47)	2371	1	1057976
32575	9.5	1.4	1.7	chr13	66178524	66183032	(48181296)	C	HERVL-int	LTR/ERVL	(0)	5757	1173	1060718
526	17.3	0.0	0.0	chr13	66183033	66183143	(48181185)	C	AluSq2	SINE/Alu	(0)	313	204	1060719
2250	13.1	0.0	0.0	chr13	66787334	66787638	(47576690)	+	AluSx1	SINE/Alu	1	305	(7)	1061454
1102	20.6	17.9	0.6	chr13	66788056	66788382	(47575946)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1061455
2275	20.5	1.8	0.5	chr13	67039155	67039600	(47324728)	+	LTR45B	LTR/ERV1	3	454	(35)	1061781
2818	17.8	1.2	2.6	chr13	67790919	67791323	(46573005)	C	MER61D	LTR/ERV1	(11)	490	92	1062725
2079	14.8	0.0	0.0	chr13	67791324	67791621	(46572707)	+	AluSc8	SINE/Alu	1	298	(13)	1062726
2507	16.9	14.3	4.2	chr13	68056803	68057351	(46306977)	C	LTR18B	LTR/ERVL	(0)	614	1	1063046
190	29.7	6.3	6.3	chr13	68057352	68057430	(46306898)	C	L2a	LINE/L2	(12)	3414	3336	1063047
1942	23.2	3.6	7.9	chr13	68190899	68191478	(46172850)	+	MLT2B3	LTR/ERVL	1	554	(0)	1063215
3341	19.6	4.1	1.6	chr13	69163955	69164638	(45199690)	+	Tigger2b_Pri	DNA/TcMar-Tigger	365	1066	(2)	1064449
37	0.0	0.0	0.0	chr13	69164639	69164670	(45199658)	+	(CA)n	Simple_repeat	1	32	(0)	1064450
1877	20.3	5.3	3.7	chr13	69164677	69165157	(45199171)	+	L1MA9	LINE/L1	5793	6281	(31)	1064436
1870	24.4	11.2	0.4	chr13	71396875	71397437	(42966891)	+	L1ME1	LINE/L1	5658	6289	(63)	1067395
245	33.3	10.4	2.4	chr13	71536642	71536764	(42827564)	C	L2b	LINE/L2	(0)	3375	3242	1067577
772	31.7	13.1	4.1	chr13	71536758	71537541	(42826787)	+	L2a	LINE/L2	2559	3412	(14)	1067578
2833	11.7	3.2	0.2	chr13	72838405	72838823	(41525505)	C	MER57A1	LTR/ERV1	(0)	432	1	1069423
724	33.0	13.4	3.3	chr13	72838824	72839532	(41524796)	C	L2c	LINE/L2	(292)	3095	2314	1069422
1865	24.6	4.7	4.2	chr13	74102243	74102413	(40261915)	+	L1MC4	LINE/L1	7225	7384	(658)	1071505
2248	10.5	0.3	0.3	chr13	74102416	74102709	(40261619)	+	AluSx1	SINE/Alu	1	294	(18)	1071510
187	37.6	9.5	1.7	chr13	74574369	74574601	(39789727)	+	L2	LINE/L2	2808	3060	(359)	1072127
887	19.7	6.8	0.5	chr13	74574612	74574805	(39789523)	+	MER3	DNA/hAT-Charlie	1	207	(2)	1072128
712	21.4	13.5	4.5	chr13	74634533	74634733	(39729595)	+	MER58A	DNA/hAT-Charlie	1	222	(2)	1072206
35442	7.6	0.9	1.4	chr13	74804240	74808893	(39555435)	+	HERVL-int	LTR/ERVL	1025	5654	(0)	1072440
2782	12.7	2.1	0.5	chr13	75221793	75222213	(39142115)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1072994
2309	25.6	7.6	2.3	chr13	75391226	75391762	(38972566)	+	L2a	LINE/L2	1774	2339	(1080)	1073247
551	31.3	6.3	4.5	chr13	75391738	75392155	(38972173)	+	L2a	LINE/L2	2910	3335	(91)	1073247
505	21.4	0.0	2.8	chr13	75408428	75408533	(38955795)	C	L1PB4	LINE/L1	(5)	6151	6049	1073278
2366	17.2	3.2	0.0	chr13	75408533	75408989	(38955339)	C	L1MB8	LINE/L1	(484)	5694	5227	1073277
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
911	22.8	13.0	3.8	chr13	75538434	75538830	(38825498)	C	L1MC4	LINE/L1	(0)	8042	7604	1073517
359	27.3	6.0	0.0	chr13	75746304	75746413	(38617915)	+	L3	LINE/CR1	2762	2878	(1221)	1073832
311	27.2	11.7	2.5	chr13	75746474	75746635	(38617693)	+	MER102b	DNA/hAT-Charlie	27	205	(136)	1073833
14	8.1	3.9	0.0	chr13	75746709	75746734	(38617594)	+	(TTTA)n	Simple_repeat	1	27	(0)	1073834
326	37.0	8.6	1.5	chr13	75782335	75782525	(38581803)	+	MIRb	SINE/MIR	32	240	(28)	1073876
1880	18.8	9.1	5.0	chr13	75782526	75783007	(38581321)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	1073877
939	12.4	10.6	0.0	chr13	76271807	76271983	(38092345)	+	L1PB1	LINE/L1	3	200	(6663)	1074505
10024	14.7	4.7	0.9	chr13	76271963	76275663	(38088665)	+	L1PB1	LINE/L1	811	4708	(2154)	1074505
16034	12.9	4.9	0.3	chr13	76740777	76743380	(37620948)	+	Tigger4	DNA/TcMar-Tigger	1	2731	(0)	1075153
464	36.3	0.5	7.1	chr13	76842148	76842387	(37521941)	C	L2b	LINE/L2	(3)	3372	3149	1075316
405	35.1	12.4	1.6	chr13	76842482	76842918	(37521410)	C	L2b	LINE/L2	(2158)	1261	771	1075316
3512	8.9	28.1	0.2	chr13	77047494	77048101	(37316227)	+	LTR25	LTR/ERV1	1	844	(0)	1075642
1479	18.8	5.2	3.4	chr13	77048102	77048403	(37315925)	+	MLT1A0	LTR/ERVL-MaLR	48	363	(2)	1075641
361	26.2	8.3	2.4	chr13	77048602	77048726	(37315602)	+	MIRb	SINE/MIR	89	221	(47)	1075643
17	7.9	0.0	0.0	chr13	77699235	77699261	(36665067)	+	(TTAT)n	Simple_repeat	1	27	(0)	1076571
7778	20.8	8.5	3.1	chr13	77866933	77868726	(36495602)	+	L1M4b	LINE/L1	12	1912	(4955)	1076779
15	23.9	0.9	4.4	chr13	78603149	78603224	(35761104)	+	G-rich	Low_complexity	1	73	(0)	1077763
574	26.3	3.2	1.9	chr13	79069984	79070138	(35294190)	+	MIRb	SINE/MIR	84	240	(28)	1078397
6021	14.9	11.4	0.2	chr13	79393528	79394632	(34969696)	+	MER50-int	LTR/ERV1	1	1231	(5974)	1078857
8889	21.3	5.0	2.7	chr13	79970627	79974921	(34389407)	C	L1PA17	LINE/L1	(2337)	4578	343	1079622
431	31.1	3.5	5.3	chr13	85392360	85392566	(28971762)	C	LTR86B2	LTR/ERVL	(228)	259	57	1086492
1525	20.9	1.3	0.3	chr13	87805839	87806136	(26558192)	C	MER74C	LTR/ERVL	(0)	460	160	1089493
585	20.9	1.7	0.0	chr13	87806271	87806385	(26557943)	C	MER74C	LTR/ERVL	(304)	156	40	1089493
878	15.1	10.2	1.7	chr13	89079587	89079882	(25284446)	+	MER106B	DNA/hAT-Charlie	562	885	(174)	1091127
15	10.1	2.9	2.9	chr13	89079892	89079925	(25284403)	+	A-rich	Low_complexity	1	35	(0)	1091128
343	35.5	10.7	2.9	chr13	89724530	89724874	(24639454)	+	L2a	LINE/L2	2404	2778	(641)	1092001
2581	5.9	0.0	0.3	chr13	89866889	89867191	(24497137)	+	AluY	SINE/Alu	2	303	(8)	1092200
350	35.3	9.5	4.9	chr13	89867192	89867474	(24496854)	+	L2a	LINE/L2	2043	2346	(1073)	1092198
9913	16.0	2.3	0.4	chr13	90026907	90028504	(24335824)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1092416
9622	12.6	3.7	4.0	chr13	90546834	90548398	(23815930)	C	THE1B-int	LTR/ERVL-MaLR	(7)	1573	13	1093056
200	39.9	7.8	0.5	chr13	91133798	91133986	(23230342)	+	L3	LINE/CR1	3883	4086	(13)	1093835
17	25.4	0.0	0.0	chr13	91134251	91134297	(23230031)	+	(TTTTT)n	Simple_repeat	1	47	(0)	1093836
249	33.8	1.2	0.0	chr13	92200714	92200793	(22163535)	C	MLT1K	LTR/ERVL-MaLR	(359)	236	156	1095284
49	2.2	0.0	0.0	chr13	92200975	92201020	(22163308)	+	(AC)n	Simple_repeat	1	46	(0)	1095285
3493	14.3	0.8	7.1	chr13	93262771	93263351	(21100977)	C	MER41E	LTR/ERV1	(0)	595	53	1096651
18	18.8	2.3	0.0	chr13	93321944	93321986	(21042342)	+	(TCC)n	Simple_repeat	1	44	(0)	1096745
380	26.1	10.3	0.0	chr13	93321989	93322153	(21042175)	C	MER5C	DNA/hAT-Charlie	(42)	271	88	1096746
1543	7.6	7.4	0.0	chr13	93322164	93322387	(21041941)	C	L1PA13	LINE/L1	(19)	6144	5903	1096747
522	32.5	12.0	3.1	chr13	94427207	94427847	(19936481)	+	MamGypLTR3	LTR/Gypsy	188	893	(1)	1098280
196	22.5	0.0	0.0	chr13	94550361	94550400	(19813928)	C	L2b	LINE/L2	(10)	3365	3326	1098499
65	4.2	0.0	1.3	chr13	94550535	94550610	(19813718)	+	(TGGA)n	Simple_repeat	1	76	(0)	1098500
279	10.5	0.0	0.0	chr13	94550753	94550790	(19813538)	+	tRNA-Gly-GGA	tRNA	1	38	(37)	1098501
9601	11.4	5.5	1.3	chr13	95806978	95808494	(18555834)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	1134	1100711
668	27.0	7.0	0.9	chr13	97327960	97328172	(17036156)	C	MIR	SINE/MIR	(20)	242	16	1102852
20	0.0	0.0	0.0	chr13	97328174	97328195	(17036133)	+	(T)n	Simple_repeat	1	22	(0)	1102853
14	12.6	5.7	0.0	chr13	98576055	98576089	(15788239)	+	(GTCCCGG)n	Simple_repeat	1	37	(0)	1104829
12	14.6	0.0	5.9	chr13	98576268	98576301	(15788027)	+	(CCCG)n	Simple_repeat	1	34	(0)	1104830
1561	20.9	10.8	1.2	chr13	99578301	99578711	(14785617)	+	MLT1C	LTR/ERVL-MaLR	13	467	(0)	1106469
778	26.1	5.1	6.0	chr13	111228143	111228440	(3135888)	+	L1MC5a	LINE/L1	2315	2609	(168)	1122326
1598	27.9	4.5	4.1	chr13	111429128	111429228	(2935100)	C	L1MC4	LINE/L1	(983)	7059	6964	1122514
13	16.2	0.0	5.3	chr13	111429491	111429528	(2934800)	+	(CTGCCC)n	Simple_repeat	1	38	(0)	1122518
228	28.7	17.4	3.7	chr13	111429572	111429734	(2934594)	+	L2c	LINE/L2	2410	2599	(820)	1122519
31	1.3	3.9	11.3	chr13	111590150	111590251	(2774077)	+	(GATG)n	Simple_repeat	1	106	(0)	1122696
26	10.9	4.6	4.4	chr13	112072661	112072725	(2291603)	+	(CTCC)n	Simple_repeat	1	68	(0)	1123134
5232	16.9	4.8	2.0	chr13	112333684	112334605	(2029723)	+	Tigger3b	DNA/TcMar-Tigger	199	1154	(77)	1123373
1401	21.8	10.0	0.5	chr13	112714768	112715173	(1649155)	C	L1MB3	LINE/L1	(3)	6180	5732	1123861
324	18.9	2.2	0.6	chr13	112972183	112972863	(1391465)	+	(GATG)n	Simple_repeat	1	696	(0)	1124107
30	10.5	0.0	0.0	chr13	113759536	113759586	(604742)	+	(CTGTCT)n	Simple_repeat	1	51	(0)	1125004
668	37.1	6.1	8.3	chr14	19927560	19928268	(87115450)	+	ERVL-E-int	LTR/ERVL	4090	4781	(886)	1127317
31	0.0	0.0	2.9	chr14	19928279	19928312	(87115406)	+	(TTAT)n	Simple_repeat	1	34	(0)	1127318
292	31.6	5.5	0.0	chr14	19928313	19928448	(87115270)	C	L1MEg	LINE/L1	(4939)	1145	1002	1127319
1505	10.1	0.0	6.7	chr14	20342186	20342423	(86701295)	C	AluSx1	SINE/Alu	(9)	303	82	1127885
2277	3.6	3.1	6.2	chr14	20342727	20343030	(86700688)	C	AluY	SINE/Alu	(17)	294	1	1127886
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
722	0.0	0.0	0.0	chr14	20610132	20610213	(86433505)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1128337
267	10.2	0.0	24.4	chr14	20630432	20630509	(86413209)	C	tRNA-Tyr-TAC	tRNA	(15)	61	3	1128375
544	0.0	0.0	22.3	chr14	20653099	20653192	(86390526)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128415
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
563	0.0	0.0	18.0	chr14	20683273	20683361	(86360357)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	1128459
327	25.7	1.9	2.9	chr14	20753026	20753129	(86290589)	+	MER41-int	LTR/ERV1	768	870	(5393)	1128541
561	34.0	5.0	6.6	chr14	20753134	20753876	(86289842)	+	MER41-int	LTR/ERV1	457	1129	(5993)	1128541
201	23.5	8.9	0.0	chr14	21015189	21015239	(86028479)	C	MamRTE1	LINE/RTE-BovB	(27)	3785	3730	1128965
376	35.8	15.2	0.9	chr14	21015571	21015897	(86027821)	C	MamRTE1	LINE/RTE-BovB	(745)	3067	2686	1128966
2362	9.4	3.2	0.7	chr14	21221768	21222066	(85821652)	+	AluY	SINE/Alu	1	307	(4)	1129296
1191	20.3	12.9	3.6	chr14	21222067	21222376	(85821342)	+	L1M4	LINE/L1	5375	5711	(473)	1129295
879	16.7	15.6	0.5	chr14	21222388	21222610	(85821108)	C	L1MB8	LINE/L1	(215)	5963	5701	1129297
2415	10.1	0.0	0.0	chr14	21285324	21285629	(85758089)	+	AluSc8	SINE/Alu	1	306	(5)	1129428
842	33.2	10.0	3.1	chr14	21285630	21285984	(85757734)	C	L2a	LINE/L2	(351)	3075	2656	1129427
21	16.1	0.0	0.0	chr14	21384077	21384117	(85659601)	+	(T)n	Simple_repeat	1	41	(0)	1129660
346	28.2	2.8	2.8	chr14	22664151	22664256	(84379462)	C	MIRb	SINE/MIR	(11)	257	152	1131499
971	26.8	4.5	11.6	chr14	22664261	22664537	(84379181)	+	MLT1G3	LTR/ERVL-MaLR	1	281	(314)	1131500
957	18.8	0.0	0.0	chr14	22664538	22664697	(84379021)	+	AluJo	SINE/Alu	140	299	(13)	1131501
971	27.1	5.6	10.5	chr14	22664698	22664947	(84378771)	+	MLT1G3	LTR/ERVL-MaLR	242	467	(88)	1131500
14	0.0	0.0	0.0	chr14	22872318	22872335	(84171383)	+	(CCT)n	Simple_repeat	1	18	(0)	1131878
17	8.8	0.0	9.1	chr14	22872439	22872482	(84171236)	+	(CCCCAG)n	Simple_repeat	1	44	(0)	1131879
236	32.1	2.3	1.2	chr14	23182422	23182506	(83861212)	+	MER5A	DNA/hAT-Charlie	79	164	(25)	1132422
5641	11.0	0.6	1.5	chr14	23703474	23704278	(83339440)	+	HSMAR1	DNA/TcMar-Mariner	1	798	(489)	1133235
2753	6.7	5.5	0.0	chr14	23704327	23704700	(83339018)	+	L1P1	LINE/L1	4653	5048	(1098)	1133236
16	22.2	0.0	0.0	chr14	24036320	24036361	(83007357)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	1133673
18	3.2	5.9	2.8	chr14	24443018	24443051	(82600667)	+	(AAACC)n	Simple_repeat	1	36	(0)	1134267
582	16.4	5.3	2.5	chr14	24696040	24697528	(82346190)	+	(AGTG)n	Simple_repeat	1	1568	(0)	1134547
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
14	24.3	1.5	6.1	chr14	28766590	28766596	(78277122)	+	(GCGG)n	Simple_repeat	1	61	(0)	1139686
12	21.8	1.9	5.6	chr14	28766597	28766649	(78277069)	+	G-rich	Low_complexity	1	54	(0)	1139687
1476	12.0	2.9	0.0	chr14	30965538	30965737	(76077981)	+	AluSx1	SINE/Alu	1	206	(106)	1142613
401	7.8	0.0	0.0	chr14	30965738	30965788	(76077930)	+	AluSq2	SINE/Alu	253	303	(10)	1142614
3039	8.9	3.7	9.9	chr14	30965849	30966394	(76077324)	+	LTR10F	LTR/ERV1	1	511	(0)	1142615
29964	10.8	3.4	2.8	chr14	30969449	30972048	(76071670)	+	HERVIP10FH-int	LTR/ERV1	2484	5102	(0)	1142615
2991	8.1	3.0	4.8	chr14	30972049	30972553	(76071165)	+	LTR10F	LTR/ERV1	1	496	(15)	1142615
1538	15.9	1.2	2.8	chr14	30972554	30972804	(76070914)	+	AluJr	SINE/Alu	36	282	(30)	1142618
824	20.1	0.0	1.8	chr14	31197457	31197623	(75846095)	+	MER5A1	DNA/hAT-Charlie	3	166	(0)	1143128
379	26.8	9.5	2.2	chr14	31197731	31197955	(75845763)	+	L2c	LINE/L2	1866	2108	(1311)	1143129
5204	18.5	5.5	2.9	chr14	31197956	31198769	(75844949)	+	Charlie1a	DNA/hAT-Charlie	108	955	(500)	1143130
2490	7.7	0.0	0.3	chr14	32210799	32211097	(74832621)	C	AluY	SINE/Alu	(13)	298	1	1144841
35	0.0	0.0	0.0	chr14	32934320	32934349	(74109369)	+	(GT)n	Simple_repeat	1	30	(0)	1145775
23	8.8	3.7	5.4	chr14	32934774	32934827	(74108891)	+	(GCCCGA)n	Simple_repeat	1	56	(0)	1145776
24094	9.0	0.7	1.8	chr14	34139341	34142492	(72901226)	+	L1PA7	LINE/L1	2	3147	(3314)	1147301
2367	10.5	0.0	0.0	chr14	34142493	34142796	(72900922)	+	AluY	SINE/Alu	1	304	(7)	1147302
334	27.2	7.1	10.1	chr14	34539085	34539301	(72504417)	C	MIRc	SINE/MIR	(6)	262	53	1148041
16	19.5	0.0	7.3	chr14	34539791	34539845	(72503873)	+	(GGCGG)n	Simple_repeat	1	55	(0)	1148042
2466	5.9	1.3	0.3	chr14	34539860	34540162	(72503556)	C	AluSp	SINE/Alu	(7)	306	1	1148043
26	0.0	0.0	0.0	chr14	35808843	35808867	(71234851)	+	(CTGCCA)n	Simple_repeat	1	25	(0)	1150653
11	23.5	0.0	6.4	chr14	36519375	36519421	(70524297)	+	GA-rich	Low_complexity	1	47	(0)	1151704
412	35.6	10.5	4.5	chr14	37042795	37043734	(69999984)	+	L2c	LINE/L2	2276	3275	(112)	1152385
200	34.2	4.4	6.5	chr14	37561046	37561276	(69482442)	+	L2c	LINE/L2	3097	3322	(65)	1153135
327	30.8	4.1	2.5	chr14	39103689	39103808	(67939910)	C	L2a	LINE/L2	(1)	3425	3304	1155116
333	27.2	14.4	2.3	chr14	39318759	39318936	(67724782)	+	MIR3	SINE/MIR	7	206	(2)	1155568
1922	13.8	0.0	1.4	chr14	44913459	44913748	(62129970)	C	AluSz6	SINE/Alu	(26)	286	1	1162329
17	15.5	0.0	0.0	chr14	44961473	44961501	(62082217)	+	A-rich	Low_complexity	1	29	(0)	1162406
40	20.7	3.2	0.0	chr14	47674786	47674879	(59368839)	+	(CA)n	Simple_repeat	1	97	(0)	1165885
22	20.0	0.0	6.9	chr14	47674984	47675055	(59368663)	+	(GCG)n	Simple_repeat	1	72	(0)	1165886
488	26.9	7.1	0.5	chr14	49579814	49580009	(57463709)	+	MIRb	SINE/MIR	7	218	(50)	1168191
244	29.7	4.7	1.0	chr14	49580321	49580422	(57463296)	+	L2	LINE/L2	391	496	(2923)	1168192
820	25.1	7.2	2.2	chr14	49580469	49580589	(57463129)	+	Arthur1B	DNA/hAT-Tip100	1	131	(1094)	1168193
4291	22.8	9.4	2.6	chr14	52560162	52561326	(54482392)	+	L1ME1	LINE/L1	4375	5634	(545)	1173116
876	16.1	0.0	0.0	chr14	52561327	52561450	(54482268)	+	FLAM_A	SINE/Alu	1	124	(18)	1173120
3132	22.8	5.3	3.3	chr14	52561451	52561999	(54481719)	+	L1ME1	LINE/L1	5635	6178	(1)	1173116
2222	10.4	0.7	0.3	chr14	52706062	52706359	(54337359)	+	AluSx	SINE/Alu	1	299	(13)	1173366
384	33.3	3.8	1.7	chr14	52712195	52712374	(54331344)	C	MER5A	DNA/hAT-Charlie	(5)	184	1	1173370
3307	7.3	0.6	20.9	chr14	53181384	53182025	(53861693)	C	LTR10F	LTR/ERV1	(0)	511	1	1174163
1301	16.4	1.8	1.3	chr14	55191897	55192122	(51851596)	C	AluJr	SINE/Alu	(1)	311	85	1177223
1801	16.7	1.3	1.3	chr14	55959301	55959599	(51084119)	C	AluJb	SINE/Alu	(2)	310	12	1178588
744	33.0	8.7	7.9	chr14	56565366	56566034	(50477684)	+	MamGypLTR1b	LTR/Gypsy	36	710	(72)	1179407
342	25.7	15.1	11.0	chr14	57281352	57281578	(49762140)	C	MLT1O	LTR/ERVL-MaLR	(25)	517	280	1180544
5725	14.4	2.2	3.6	chr14	58310310	58310963	(48732755)	+	L1MA8	LINE/L1	4674	5328	(815)	1182020
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
28127	1.3	0.2	0.1	chr14	59946505	59952523	(47091195)	C	L1PA2	LINE/L1	(1)	6154	127	1184394
19	4.0	0.0	0.0	chr14	59952624	59952649	(47091069)	+	(TGT)n	Simple_repeat	1	26	(0)	1184395
22727	10.8	2.1	0.6	chr14	59952651	59959063	(47084655)	C	L1PA8	LINE/L1	(9)	6478	10	1184396
11466	19.8	8.2	5.5	chr14	60126376	60128930	(46914788)	+	L1MB7	LINE/L1	14	2642	(4225)	1184589
405	32.7	9.2	7.8	chr14	60959366	60959803	(46083915)	C	L1M1	LINE/L1	(5696)	1800	1356	1185802
1004	19.2	7.9	7.4	chr14	60959797	60960134	(46083584)	C	L1ME3E	LINE/L1	(228)	6014	5675	1185808
302	27.7	10.4	2.6	chr14	60980673	60980787	(46062931)	+	MIR	SINE/MIR	21	145	(117)	1185830
13	9.1	0.0	3.9	chr14	63543158	63543183	(43500535)	+	(GGGA)n	Simple_repeat	1	26	(0)	1189433
15	25.1	4.9	0.0	chr14	63852902	63852962	(43190756)	+	G-rich	Low_complexity	1	64	(0)	1190225
15	31.8	0.0	0.0	chr14	63853205	63853262	(43190456)	+	G-rich	Low_complexity	1	58	(0)	1190226
355	26.2	1.8	8.6	chr14	64551764	64551870	(42491848)	+	L2c	LINE/L2	3279	3377	(10)	1191475
183	35.3	3.8	11.9	chr14	64551890	64552175	(42491543)	C	L2	LINE/L2	(644)	2775	2514	1191476
2296	10.7	0.0	0.0	chr14	64552207	64552505	(42491213)	+	AluSx1	SINE/Alu	1	299	(13)	1191477
16	16.0	0.0	2.7	chr14	67021550	67021591	(40022127)	+	(TTTGG)n	Simple_repeat	1	40	(0)	1195339
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
3317	9.0	3.2	0.2	chr14	67709836	67710293	(39333425)	+	MER4A1	LTR/ERV1	1	472	(0)	1196601
13163	14.5	10.8	12.0	chr14	67710294	67710942	(39332776)	C	MER4-int	LTR/ERV1	(2597)	4001	2576	1196598
13	11.4	0.0	6.2	chr14	68364193	68364224	(38679494)	+	(TCCC)n	Simple_repeat	1	32	(0)	1197597
1871	23.7	5.4	3.8	chr14	69016270	69016720	(38026998)	C	L1M5	LINE/L1	(1017)	5129	4668	1198697
1777	16.5	1.6	4.7	chr14	69016721	69016910	(38026808)	C	AluJb	SINE/Alu	(0)	312	137	1198698
26	0.0	0.0	0.0	chr14	69016911	69016935	(38026783)	+	(T)n	Simple_repeat	1	25	(0)	1198699
1777	16.5	1.6	4.7	chr14	69016936	69017066	(38026652)	C	AluJb	SINE/Alu	(182)	130	1	1198698
583	33.0	5.3	5.6	chr14	70712130	70712450	(36331268)	+	L2c	LINE/L2	2592	2911	(508)	1201613
4315	26.9	10.6	6.7	chr14	71132407	71134206	(35909512)	C	ERV3-16A3_I-int	LTR/ERVL	(540)	4686	2808	1202238
41085	6.6	2.4	0.4	chr14	71459860	71464360	(35579358)	C	HERVL-int	LTR/ERVL	(0)	5654	1093	1202846
36326	6.4	1.1	0.3	chr14	71936518	71940970	(35102748)	C	HERVL-int	LTR/ERVL	(0)	5654	1168	1203544
16	12.2	5.6	0.0	chr14	73026790	73026825	(34016893)	+	(CCACCC)n	Simple_repeat	1	38	(0)	1205313
15	21.6	1.9	3.8	chr14	73026865	73026876	(34016842)	+	(GCCCG)n	Simple_repeat	1	51	(0)	1205314
17	8.8	5.3	2.5	chr14	73026877	73026914	(34016804)	+	(GCCCT)n	Simple_repeat	1	40	(0)	1205315
1711	19.5	12.7	4.1	chr14	73662446	73662905	(33380813)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1206806
252	28.8	17.5	1.7	chr14	73662906	73662966	(33380752)	+	L2c	LINE/L2	2576	2637	(782)	1206805
257	35.3	7.6	4.6	chr14	73728436	73728780	(33314938)	+	L2b	LINE/L2	3018	3373	(2)	1206949
206	22.2	11.3	0.0	chr14	73728994	73729056	(33314662)	C	MIRb	SINE/MIR	(71)	197	127	1206950
298	20.0	1.5	0.0	chr14	73729263	73729327	(33314391)	C	MADE2	DNA/TcMar-Mariner	(0)	80	15	1206951
16	27.8	0.0	0.0	chr14	73950046	73950091	(33093627)	+	(CAGCGA)n	Simple_repeat	1	46	(0)	1207453
2488	8.7	0.0	0.0	chr14	74251169	74251479	(32792239)	+	AluSq2	SINE/Alu	2	312	(1)	1208112
200	22.9	4.7	1.6	chr14	74251497	74251558	(32792160)	+	MER5B	DNA/hAT-Charlie	115	178	(0)	1208113
2744	14.9	11.7	7.8	chr14	74491681	74492342	(32551376)	+	LTR8	LTR/ERV1	1	691	(0)	1208640
420	27.6	2.0	9.1	chr14	74762815	74763094	(32280624)	C	L1MD	LINE/L1	(1534)	4612	4360	1209137
12	19.9	0.0	0.0	chr14	74763532	74763560	(32280158)	+	(CCG)n	Simple_repeat	1	29	(0)	1209138
285	16.8	1.0	5.3	chr14	76856518	76857204	(30186514)	+	(GGAT)n	Simple_repeat	1	694	(0)	1213074
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
251	23.1	0.0	3.7	chr14	78239231	78239284	(28804434)	C	MIR	SINE/MIR	(210)	52	1	1215889
266	29.1	1.9	3.7	chr14	78239301	78239407	(28804311)	+	L2c	LINE/L2	3274	3378	(9)	1215890
577	25.1	9.1	7.5	chr14	78239503	78239693	(28804025)	+	L2a	LINE/L2	2913	3121	(305)	1215891
2024	12.5	1.3	1.6	chr14	78239694	78239997	(28803721)	C	AluSx1	SINE/Alu	(3)	309	7	1215892
440	34.6	14.0	2.6	chr14	89303087	89303507	(17740211)	+	L2c	LINE/L2	2910	3386	(1)	1231825
349	29.0	0.0	1.1	chr14	89537116	89537209	(17506509)	+	L2c	LINE/L2	3254	3346	(41)	1232260
53	0.0	0.0	0.0	chr14	89537442	89537489	(17506229)	+	(TGGA)n	Simple_repeat	1	48	(0)	1232261
15	19.1	0.0	2.6	chr14	89537523	89537560	(17506158)	+	(ATGG)n	Simple_repeat	1	38	(0)	1232262
183	28.2	0.5	0.0	chr14	89537561	89537621	(17506097)	C	MIRb	SINE/MIR	(159)	109	45	1232263
2167	17.2	2.5	7.5	chr14	89586944	89587370	(17456348)	C	MLT2D	LTR/ERVL	(0)	414	10	1232355
1465	13.1	5.5	2.7	chr14	89794764	89794968	(17248750)	C	L1MC3	LINE/L1	(1)	7784	7565	1232753
10301	15.3	4.4	2.1	chr14	91016687	91018315	(16025403)	+	ERVL-B4-int	LTR/ERVL	3772	5420	(294)	1234852
549	18.6	0.8	3.1	chr14	91113797	91113924	(15929794)	+	MER5B	DNA/hAT-Charlie	16	140	(38)	1235085
1034	21.6	20.8	3.1	chr14	91257474	91257894	(15785824)	+	LTR33	LTR/ERVL	1	515	(0)	1235415
297	30.8	6.3	1.5	chr14	91824432	91824566	(15219152)	+	L2	LINE/L2	2468	2609	(810)	1236362
568	32.6	9.0	6.2	chr14	91824560	91824979	(15218739)	C	L2b	LINE/L2	(0)	3426	2956	1236363
24	22.4	1.3	3.8	chr14	93115402	93115479	(13928239)	+	(CCGC)n	Simple_repeat	1	79	(0)	1238816
2510	5.3	0.0	1.0	chr14	93185866	93186168	(13857550)	C	AluY	SINE/Alu	(11)	300	1	1239032
732	16.5	2.3	11.0	chr14	93984767	93984957	(13058761)	+	MER20	DNA/hAT-Charlie	46	219	(0)	1240409
241	20.3	1.7	1.7	chr14	93985088	93985147	(13058571)	C	MARNA	DNA/TcMar-Mariner	(348)	238	179	1240410
41	0.0	0.0	0.0	chr14	93985291	93985325	(13058393)	+	(AC)n	Simple_repeat	1	35	(0)	1240411
16	20.1	0.0	5.9	chr14	95157310	95157360	(11886358)	+	(GCC)n	Simple_repeat	1	51	(0)	1242512
13	3.3	12.9	0.0	chr14	96939589	96939619	(10104099)	+	(TGGAC)n	Simple_repeat	1	35	(0)	1245768
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
3947	12.9	8.9	6.0	chr14	100004208	100005066	(7038652)	C	MER4-int	LTR/ERV1	(2967)	3631	2738	1250997
1965	12.7	0.3	8.1	chr14	100023197	100023371	(7020347)	C	AluSx1	SINE/Alu	(6)	306	137	1251030
26	0.0	0.0	0.0	chr14	100023372	100023396	(7020322)	+	(T)n	Simple_repeat	1	25	(0)	1251031
1965	12.7	0.3	8.1	chr14	100023397	100023416	(7020302)	C	AluSx1	SINE/Alu	(176)	136	137	1251030
1638	10.5	0.5	0.0	chr14	100023417	100023626	(7020092)	C	AluSp	SINE/Alu	(102)	211	1	1251032
152	9.8	0.0	3.2	chr14	100585195	100585474	(6458244)	+	(CCAT)n	Simple_repeat	1	280	(0)	1252095
271	27.2	5.0	0.0	chr14	100585512	100585601	(6458117)	+	MIRb	SINE/MIR	159	264	(4)	1252096
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
16	0.0	0.0	0.0	chr14	102317173	102317189	(4726529)	+	(T)n	Simple_repeat	1	17	(0)	1254659
16	18.9	2.3	2.2	chr14	103385444	103385487	(3658231)	+	(GCG)n	Simple_repeat	1	45	(0)	1256712
14	20.8	0.0	0.0	chr14	103385584	103385616	(3658102)	+	(CTC)n	Simple_repeat	1	33	(0)	1256713
283	31.7	2.9	0.0	chr14	103866023	103866123	(3177595)	C	MIR3	SINE/MIR	(66)	142	39	1257685
2181	9.2	0.0	0.7	chr14	103866462	103866767	(3176951)	C	AluSc	SINE/Alu	(0)	309	1	1257686
699	21.2	2.7	1.6	chr14	104078003	104078184	(2965534)	+	LTR41C	LTR/ERVL	2	185	(516)	1258068
336	24.4	10.3	7.1	chr14	104078215	104078439	(2965279)	+	LTR41C	LTR/ERVL	363	595	(106)	1258068
232	30.1	7.0	0.0	chr14	104479088	104479180	(2564538)	C	MER103C	DNA/hAT-Charlie	(105)	192	93	1258454
37	21.2	0.8	5.7	chr14	104479518	104479638	(2564080)	+	(TGGAA)n	Simple_repeat	1	122	(0)	1258455
196	26.0	8.8	1.4	chr14	104675403	104675476	(2368242)	+	L2a	LINE/L2	3344	3423	(3)	1258703
154	22.1	3.2	0.3	chr14	104675486	104675861	(2367857)	+	(TGGA)n	Simple_repeat	1	388	(0)	1258704
319	31.0	0.9	1.1	chr14	104685562	104686541	(2357177)	+	G-rich	Low_complexity	1	989	(0)	1258719
23	19.9	0.0	3.3	chr14	104826530	104826590	(2217128)	+	(CCCGCGC)n	Simple_repeat	1	61	(0)	1258876
679	18.3	0.6	0.3	chr14	104889859	104891116	(2152602)	+	(TGGA)n	Simple_repeat	1	1266	(0)	1258964
1991	11.4	5.5	2.0	chr14	105416893	105417171	(1626547)	C	AluSx	SINE/Alu	(20)	292	1	1259661
445	28.9	16.6	0.0	chr14	105417172	105417216	(1626502)	C	HAL1b	LINE/L1	(1586)	835	786	1259660
2571	4.7	0.7	0.0	chr14	105417395	105417695	(1626023)	C	AluY	SINE/Alu	(7)	304	2	1259663
512	8.1	6.6	6.6	chr15	25758566	25758671	(76232518)	+	LTR10F	LTR/ERV1	104	209	(302)	1270461
441	6.3	10.4	6.9	chr15	25758678	25758779	(76232410)	+	LTR10F	LTR/ERV1	104	209	(302)	1270461
2452	11.3	0.0	10.3	chr15	25758786	25759240	(76231949)	+	LTR10F	LTR/ERV1	104	511	(0)	1270462
891	22.4	6.8	0.4	chr15	28277229	28277474	(73713715)	+	L1MD2	LINE/L1	6081	6343	(16)	1273592
1451	18.9	6.4	6.1	chr15	28277821	28277974	(73713215)	C	MER2	DNA/TcMar-Tigger	(0)	345	208	1273595
283	36.5	3.2	4.1	chr15	28897132	28897177	(73094012)	+	L1ME3A	LINE/L1	68	117	(2660)	1274713
36	0.0	0.0	2.9	chr15	28897178	28897212	(73093977)	+	(AC)n	Simple_repeat	1	35	(0)	1274714
1020	23.9	1.9	3.7	chr15	28897213	28897333	(73093856)	+	L1ME3A	LINE/L1	5372	5482	(691)	1274713
2336	11.2	0.0	1.0	chr15	28897334	28897647	(73093542)	+	AluSx1	SINE/Alu	2	312	(0)	1274715
252	32.0	4.8	6.6	chr15	32662739	32662949	(69328240)	C	Tigger16a	DNA/TcMar-Tigger	(737)	220	14	1280256
73	6.7	4.5	0.0	chr15	32663033	32663143	(69328046)	+	(AT)n	Simple_repeat	1	116	(0)	1280257
1896	21.8	2.9	7.0	chr15	32981868	32982496	(69008693)	+	L1ME1	LINE/L1	5106	5724	(455)	1280669
2583	20.2	5.8	1.7	chr15	32982497	32983088	(69008101)	+	MLT2B4	LTR/ERVL	117	717	(0)	1280671
2842	26.9	14.7	5.1	chr15	33262913	33263772	(68727417)	+	L2a	LINE/L2	1380	2335	(1084)	1281119
2254	11.5	4.5	3.5	chr15	34588273	34588649	(67402540)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1283072
279	35.8	4.2	0.7	chr15	34588722	34588859	(67402330)	C	MIR	SINE/MIR	(88)	174	32	1283073
1780	16.7	2.6	2.0	chr15	35696407	35696711	(66294478)	C	AluJo	SINE/Alu	(5)	307	1	1284708
232	30.7	5.4	1.1	chr15	35696760	35696848	(66294341)	C	MLT1O	LTR/ERVL-MaLR	(347)	195	103	1284707
19	10.1	0.0	0.0	chr15	39976788	39976819	(62014370)	+	(CGAGGA)n	Simple_repeat	1	32	(0)	1290481
14	20.1	3.9	3.8	chr15	39976890	39976940	(62014249)	+	(TTCC)n	Simple_repeat	1	53	(0)	1290482
12	26.4	0.0	5.5	chr15	40323531	40323585	(61667604)	+	(GGCTCCC)n	Simple_repeat	1	55	(0)	1291015
74	22.4	2.8	4.2	chr15	40323703	40323954	(61667235)	+	(GGC)n	Simple_repeat	1	259	(0)	1291016
11	23.2	1.6	7.7	chr15	40925943	40926006	(61065183)	+	(CCAGGCC)n	Simple_repeat	1	65	(0)	1292209
2369	11.2	0.0	0.7	chr15	42625920	42626222	(59364967)	C	AluSx1	SINE/Alu	(10)	302	2	1295502
153	13.1	2.3	0.0	chr15	42626235	42626494	(59364695)	+	(TCTTCC)n	Simple_repeat	1	266	(0)	1295503
2356	9.2	0.3	5.4	chr15	42626495	42626811	(59364378)	C	AluSq	SINE/Alu	(12)	301	1	1295504
2313	9.0	0.0	1.0	chr15	42926371	42926669	(59064520)	C	AluSq2	SINE/Alu	(17)	296	1	1296034
23	0.0	0.0	0.0	chr15	43745443	43745467	(58245722)	+	(A)n	Simple_repeat	1	25	(0)	1297536
2453	7.8	0.0	0.0	chr15	43745470	43745778	(58245411)	+	AluY	SINE/Alu	3	311	(0)	1297537
453	25.9	2.9	0.0	chr15	45178929	45179063	(56812126)	C	LTR33A	LTR/ERVL	(6)	514	376	1300173
512	24.0	6.0	1.6	chr15	45179168	45179294	(56811895)	C	MIRb	SINE/MIR	(80)	188	56	1300174
15	13.4	3.0	0.0	chr15	45457028	45457060	(56534129)	+	(GCCCA)n	Simple_repeat	1	34	(0)	1300697
216	18.7	8.5	1.3	chr15	45704628	45704703	(56286486)	+	L2b	LINE/L2	3038	3119	(256)	1301229
2906	11.2	7.1	2.0	chr15	51785434	51785941	(50205248)	+	L1MA4	LINE/L1	5758	6293	(7)	1310086
14	20.4	2.5	0.0	chr15	51785942	51785981	(50205208)	+	(CATTTAA)n	Simple_repeat	1	41	(0)	1310087
19	19.2	0.0	0.0	chr15	51786032	51786067	(50205122)	+	(AT)n	Simple_repeat	1	36	(0)	1310088
222	32.2	3.3	2.5	chr15	52569689	52569809	(49421380)	+	L2	LINE/L2	1944	2065	(1354)	1311519
20	7.9	0.0	0.0	chr15	52762970	52762996	(49228193)	+	(AG)n	Simple_repeat	1	27	(0)	1311842
5358	15.7	1.9	8.2	chr15	56070092	56071336	(45919853)	+	L1MC1	LINE/L1	4272	5436	(885)	1316649
18	24.6	4.5	5.1	chr15	56094834	56094863	(45896326)	+	(GTTGGA)n	Simple_repeat	1	31	(0)	1316702
29	0.0	0.0	0.0	chr15	56094864	56094890	(45896299)	+	(GTGGGT)n	Simple_repeat	1	27	(0)	1316703
18	24.6	4.5	5.1	chr15	56094891	56094971	(45896218)	+	(GTTGGA)n	Simple_repeat	2	80	(0)	1316704
14598	12.5	2.0	3.5	chr15	56719686	56720980	(45270209)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1173	1317483
12	20.1	2.9	0.0	chr15	56733162	56733195	(45257994)	+	GA-rich	Low_complexity	1	35	(0)	1317504
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
278	28.5	6.4	6.8	chr15	56927451	56927687	(45063502)	C	L1ME4a	LINE/L1	(225)	5899	5664	1317875
750	27.8	8.2	1.2	chr15	56928057	56928304	(45062885)	+	MIRb	SINE/MIR	2	268	(0)	1317876
581	24.6	22.1	0.3	chr15	57727481	57727766	(44263423)	+	L2a	LINE/L2	3061	3426	(0)	1319112
269	30.2	4.1	1.7	chr15	57727922	57728039	(44263150)	C	MIRb	SINE/MIR	(58)	210	90	1319118
17	11.2	0.0	0.0	chr15	58749538	58749566	(43241623)	+	(CCG)n	Simple_repeat	1	29	(0)	1320716
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
629	26.7	4.1	3.8	chr15	58946990	58947254	(43043935)	+	L1ME3B	LINE/L1	5374	5639	(534)	1321112
786	24.6	1.2	2.9	chr15	58947267	58947441	(43043748)	C	AluJb	SINE/Alu	(4)	308	137	1321133
1147	23.7	6.2	3.2	chr15	58947457	58947891	(43043298)	+	L1ME3B	LINE/L1	5663	6115	(127)	1321112
432	29.4	2.0	0.7	chr15	60652134	60652277	(41338912)	+	MIRb	SINE/MIR	3	148	(120)	1324128
473	29.2	5.8	3.5	chr15	62768797	62769048	(39222141)	C	MIR	SINE/MIR	(8)	254	4	1327385
424	31.6	12.9	0.6	chr15	62769332	62769500	(39221689)	+	MER91A	DNA/hAT-Tip100	3	195	(1)	1327386
61	24.9	5.3	2.5	chr15	63277309	63277571	(38713618)	+	(CCGCGCC)n	Simple_repeat	1	277	(0)	1328275
17	4.3	0.0	0.0	chr15	64990092	64990115	(37001074)	+	(AGG)n	Simple_repeat	1	24	(0)	1331656
208	27.6	7.9	19.2	chr15	66167692	66167785	(35823404)	C	MIR3	SINE/MIR	(88)	120	33	1334100
408	28.8	15.9	1.4	chr15	66167960	66168335	(35822854)	+	L2b	LINE/L2	2720	3152	(223)	1334102
209	23.1	9.7	7.1	chr15	66269143	66269212	(35721977)	+	AmnSINE2	SINE/tRNA-Deu	27	98	(260)	1334317
17	7.8	0.0	0.0	chr15	67150477	67150503	(34840686)	+	(AAAG)n	Simple_repeat	1	27	(0)	1336160
2293	8.1	0.0	7.2	chr15	67150799	67151158	(34840031)	C	AluSx1	SINE/Alu	(0)	312	1	1336161
2135	12.9	0.0	3.5	chr15	67246099	67246416	(34744773)	+	AluJb	SINE/Alu	1	307	(5)	1336306
2023	15.3	0.0	0.7	chr15	68075784	68076083	(33915106)	C	AluSx1	SINE/Alu	(14)	298	1	1337700
2185	11.1	3.2	0.0	chr15	68076229	68076526	(33914663)	+	AluSc8	SINE/Alu	1	308	(3)	1337701
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
39	30.9	2.7	2.1	chr15	68229676	68229860	(33761329)	+	G-rich	Low_complexity	1	190	(0)	1337961
13	23.2	2.1	2.1	chr15	68579336	68579382	(33411807)	+	G-rich	Low_complexity	1	48	(0)	1338606
13	24.2	1.9	3.8	chr15	68700832	68700883	(33290306)	+	G-rich	Low_complexity	1	53	(0)	1338871
464	24.9	10.6	1.2	chr15	70042950	70043120	(31948069)	+	MIR	SINE/MIR	73	261	(1)	1341381
1424	16.6	5.8	0.0	chr15	70758889	70759117	(31232072)	C	AluJb	SINE/Alu	(12)	300	58	1342687
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
2157	11.4	0.7	5.1	chr15	72463108	72463422	(29527767)	C	AluSx	SINE/Alu	(11)	301	1	1345520
457	34.0	8.6	9.4	chr15	72463423	72463499	(29527690)	+	L2c	LINE/L2	3286	3375	(0)	1345518
452	25.9	9.1	4.7	chr15	72463639	72463839	(29527350)	C	MIR	SINE/MIR	(21)	247	34	1345521
223	31.2	6.8	1.8	chr15	72782867	72782977	(29208212)	C	L2	LINE/L2	(1266)	2153	2037	1346083
1432	21.5	7.4	8.0	chr15	74161505	74161954	(27829235)	C	L1ME1	LINE/L1	(307)	5872	5426	1348360
1951	15.3	0.4	0.0	chr15	74162288	74162621	(27828568)	C	AluJo	SINE/Alu	(0)	312	1	1348361
16	14.9	0.0	4.9	chr15	74208813	74208853	(27782336)	+	(CTTTC)n	Simple_repeat	1	41	(0)	1348444
2026	9.9	8.7	0.0	chr15	75079441	75079724	(26911465)	+	AluSq2	SINE/Alu	1	311	(2)	1350134
2541	23.4	2.0	7.7	chr15	75079725	75080478	(26910711)	+	L1ME1	LINE/L1	4057	4760	(1386)	1350132
13591	20.0	3.5	8.8	chr15	76025895	76026840	(25964349)	+	L1M2c	LINE/L1	2675	3626	(3939)	1351883
422	27.9	5.8	4.5	chr15	76059054	76059207	(25931982)	+	MER106B	DNA/hAT-Charlie	902	1057	(2)	1351930
19	13.2	0.0	6.4	chr15	76335895	76335943	(25655246)	+	A-rich	Low_complexity	1	45	(0)	1352419
25	27.4	0.0	2.4	chr15	76335943	76336024	(25655165)	+	GA-rich	Low_complexity	1	82	(0)	1352420
906	32.5	6.0	1.3	chr15	77212428	77212948	(24778241)	+	L4_C_Mam	LINE/RTE-X	4278	4824	(314)	1353707
250	35.1	1.9	1.9	chr15	77213199	77213355	(24777834)	C	L2c	LINE/L2	(44)	3343	3187	1353708
2204	12.5	0.3	0.0	chr15	77213411	77213714	(24777475)	+	AluSg4	SINE/Alu	2	306	(4)	1353709
186	22.6	0.0	15.1	chr15	78860089	78860161	(23131028)	+	OldhAT1	DNA/hAT-Ac	165	226	(2622)	1356756
17	22.0	3.2	3.1	chr15	78860433	78860494	(23130695)	+	A-rich	Low_complexity	1	64	(0)	1356757
737	21.5	3.4	3.4	chr15	79340406	79340583	(22650606)	+	MLT1F	LTR/ERVL-MaLR	371	548	(0)	1357699
1850	9.0	1.9	1.5	chr15	79924368	79924633	(22066556)	C	AluSx	SINE/Alu	(45)	267	1	1358602
2527	5.0	0.7	0.0	chr15	79925119	79925416	(22065773)	C	AluYk2	SINE/Alu	(11)	300	1	1358603
222	30.6	9.5	5.0	chr15	80030635	80030875	(21960314)	+	L2b	LINE/L2	2526	2778	(641)	1358826
114	17.9	0.5	0.9	chr15	80030876	80031099	(21960090)	+	(ATCC)n	Simple_repeat	1	225	(0)	1358827
658	31.6	6.8	2.8	chr15	80031101	80031494	(21959695)	C	L2c	LINE/L2	(0)	3387	2977	1358828
54	1.8	1.8	0.0	chr15	80153168	80153224	(21837965)	+	(GGAGT)n	Simple_repeat	1	58	(0)	1359073
213	20.5	14.3	2.5	chr15	80153278	80153357	(21837832)	+	MIR	SINE/MIR	41	131	(131)	1359074
16	22.4	1.8	3.5	chr15	80959722	80959777	(21031412)	+	GA-rich	Low_complexity	1	57	(0)	1360427
349	23.9	1.4	0.0	chr15	80959887	80959957	(21031232)	C	MER63B	DNA/hAT-Blackjack	(49)	387	316	1360428
331	25.4	0.0	0.0	chr15	80959962	80960032	(21031157)	C	MER63B	DNA/hAT-Blackjack	(352)	84	14	1360428
1554	17.2	10.2	4.1	chr15	80997714	80998052	(20993137)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	1	1360513
82	7.7	0.0	0.9	chr15	81886246	81886358	(20104831)	+	(GGAT)n	Simple_repeat	1	113	(0)	1361966
2744	19.9	4.6	1.9	chr15	82093782	82094459	(19896730)	+	Tigger7	DNA/TcMar-Tigger	2	705	(0)	1362343
17	17.9	3.7	3.6	chr15	83447824	83447877	(18543312)	+	(GCGGAG)n	Simple_repeat	1	56	(0)	1364647
2301	11.3	0.3	0.0	chr15	83766813	83767113	(18224076)	+	AluSx1	SINE/Alu	1	302	(10)	1365104
36	8.6	1.6	1.5	chr15	84143269	84143332	(17847857)	+	(GGCA)n	Simple_repeat	1	65	(0)	1365650
897	13.1	0.0	0.0	chr15	84600120	84600241	(17390948)	+	AluJo	SINE/Alu	2	123	(189)	1366241
26	15.5	0.0	0.0	chr15	84600267	84600325	(17390864)	+	(TATATA)n	Simple_repeat	1	59	(0)	1366242
255	34.7	1.0	1.0	chr15	84600651	84600749	(17390440)	C	MIR3	SINE/MIR	(25)	183	85	1366243
2384	7.1	0.0	4.0	chr15	84630824	84631145	(17360044)	+	AluSg7	SINE/Alu	1	309	(0)	1366309
806	31.3	14.1	2.5	chr15	84922119	84922934	(17068255)	+	L2a	LINE/L2	2242	3166	(260)	1366917
16	25.8	5.8	0.0	chr15	85741304	85741373	(16249816)	+	(AGGAGC)n	Simple_repeat	1	74	(0)	1368274
583	11.3	13.4	2.8	chr15	85741608	85741713	(16249476)	+	FLAM_C	SINE/Alu	15	133	(10)	1368275
17	0.0	10.0	0.0	chr15	85741714	85741743	(16249446)	+	(AAAC)n	Simple_repeat	1	33	(0)	1368276
415	37.0	2.3	3.1	chr15	88244264	88244486	(13746703)	C	MIRb	SINE/MIR	(46)	222	2	1372045
189	31.9	2.8	0.0	chr15	88620920	88620988	(13370201)	C	MIRb	SINE/MIR	(64)	204	134	1372701
2009	9.7	4.5	0.0	chr15	88924210	88924488	(13066701)	+	AluSq2	SINE/Alu	2	293	(20)	1373262
19139	10.7	5.6	6.3	chr15	88924489	88924902	(13066287)	+	HUERS-P1-int	LTR/ERV1	2712	3601	(3317)	1373259
1208	23.5	5.5	5.8	chr15	89040911	89041343	(12949846)	+	MLT1H2	LTR/ERVL-MaLR	32	463	(26)	1373524
957	23.9	4.4	9.7	chr15	89148142	89148569	(12842620)	+	L1ME3G	LINE/L1	49	358	(566)	1373719
310	27.2	3.1	3.1	chr15	89148609	89148737	(12842452)	C	MLT1H	LTR/ERVL-MaLR	(307)	242	114	1373722
395	22.6	16.5	4.8	chr15	89574824	89575009	(12416180)	C	L1M5	LINE/L1	(311)	5813	5602	1374497
1028	10.2	0.0	0.0	chr15	90274911	90275047	(11716142)	+	AluSx	SINE/Alu	2	138	(174)	1376023
13	26.1	0.0	0.0	chr15	90275080	90275120	(11716069)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1376024
13	5.3	0.0	0.0	chr15	90275295	90275314	(11715875)	+	(GGC)n	Simple_repeat	1	20	(0)	1376025
1836	18.7	7.7	14.2	chr15	90451225	90451716	(11539473)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1376391
1683	14.7	0.0	4.6	chr15	90528896	90529180	(11462009)	+	AluJb	SINE/Alu	3	274	(38)	1376555
594	19.5	11.7	0.0	chr15	90980104	90980216	(11010973)	+	FLAM_C	SINE/Alu	1	128	(15)	1377460
2077	11.3	4.9	0.7	chr15	90980513	90980805	(11010384)	C	AluSz	SINE/Alu	(6)	306	1	1377461
5324	18.8	2.8	3.6	chr15	93096758	93097167	(8894022)	C	HERVL74-int	LTR/ERVL	(4197)	1488	1076	1380979
2359	6.6	0.3	0.0	chr15	93097168	93097469	(8893720)	C	AluY	SINE/Alu	(8)	303	1	1380982
21	0.0	0.0	0.0	chr15	95498788	95498810	(6492379)	+	(A)n	Simple_repeat	1	23	(0)	1384530
14863	14.6	0.9	3.0	chr15	95567947	95570416	(6420773)	C	Tigger1	DNA/TcMar-Tigger	(2)	2416	1	1384647
26596	4.2	0.5	0.5	chr15	97289926	97296313	(4694876)	C	L1PA3	LINE/L1	(3)	6152	9	1387029
814	15.7	0.0	5.1	chr15	97296308	97296485	(4694704)	C	L1PB4	LINE/L1	(1717)	5848	5680	1387023
770	29.2	6.7	10.3	chr15	98241106	98241571	(3749618)	+	MLT1J	LTR/ERVL-MaLR	1	448	(64)	1388319
551	10.6	0.0	0.0	chr15	98241643	98241708	(3749481)	+	AluSx3	SINE/Alu	209	274	(37)	1388320
4131	19.0	4.5	3.8	chr15	98241709	98242175	(3749014)	+	L1MB3	LINE/L1	5023	5506	(677)	1388321
924	17.0	1.2	0.0	chr15	99076991	99077161	(2914028)	+	MER5B	DNA/hAT-Charlie	1	173	(5)	1389581
807	26.7	14.0	5.8	chr15	99253467	99254066	(2737123)	C	L2b	LINE/L2	(346)	3073	2417	1389850
2384	17.5	1.2	1.8	chr15	99405012	99405499	(2585690)	C	MER31A	LTR/ERV1	(0)	485	1	1390068
184	28.2	0.0	0.0	chr15	99405510	99405548	(2585641)	C	L2c	LINE/L2	(67)	3320	3282	1390069
439	28.0	9.0	3.5	chr15	101095498	101095697	(895492)	+	L1M5	LINE/L1	3710	3921	(2225)	1392309
1496	11.9	2.9	0.0	chr15	101553327	101553528	(437661)	C	AluSz6	SINE/Alu	(92)	220	13	1392934
1115	25.1	7.1	4.1	chr15	101553540	101553976	(437213)	C	MLT1D	LTR/ERVL-MaLR	(54)	451	1	1392935
510	29.6	1.3	1.9	chr15	101553981	101554135	(437054)	C	MIR	SINE/MIR	(2)	260	107	1392936
2378	7.2	0.0	1.3	chr15	101653255	101653558	(337631)	+	AluSc8	SINE/Alu	1	300	(11)	1393065
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
345	32.0	8.0	1.2	chr16	632270	632434	(89705911)	+	MIR	SINE/MIR	59	237	(31)	1395034
200	20.8	13.2	0.0	chr16	675308	675379	(89662966)	C	L2b	LINE/L2	(166)	3209	3127	1395068
237	6.1	0.0	0.0	chr16	675348	675380	(89662965)	C	L2c	LINE/L2	(226)	3161	3129	1395069
22	9.0	6.1	1.9	chr16	675675	675723	(89662622)	+	(GCGGA)n	Simple_repeat	1	52	(0)	1395070
19	6.1	0.0	7.5	chr16	675744	675783	(89662562)	+	(CCCGGC)n	Simple_repeat	1	40	(0)	1395071
21	4.2	7.1	6.7	chr16	680436	680491	(89657854)	+	G-rich	Low_complexity	1	60	(0)	1395074
2152	11.3	0.0	0.0	chr16	712402	712683	(89625662)	C	AluSg	SINE/Alu	(23)	287	6	1395108
907	22.9	15.9	3.8	chr16	712697	713043	(89625302)	C	L1MB3	LINE/L1	(2)	6181	5790	1395109
2460	7.2	1.3	0.0	chr16	713044	713348	(89624997)	+	AluSp	SINE/Alu	5	313	(0)	1395110
57	0.0	0.0	0.0	chr16	981349	981391	(89356954)	+	(TG)n	Simple_repeat	2	44	(0)	1395378
13	20.4	0.0	7.7	chr16	981581	981632	(89356713)	+	(CGCGG)n	Simple_repeat	1	52	(0)	1395379
422	26.1	0.8	0.1	chr16	993512	994523	(89343822)	+	(CACC)n	Simple_repeat	1	1020	(0)	1395389
244	26.8	23.3	0.0	chr16	994527	994720	(89343625)	C	L2c	LINE/L2	(1)	3386	3134	1395390
328	35.3	8.8	0.0	chr16	1002490	1002707	(89335638)	+	L1MB7	LINE/L1	5737	5975	(209)	1395397
261	34.3	3.6	5.6	chr16	1002724	1002865	(89335480)	+	L1MB7	LINE/L1	6028	6166	(8)	1395397
1055	8.0	3.9	2.8	chr16	1032545	1034717	(89303628)	+	(ATCC)n	Simple_repeat	1	2258	(0)	1395429
12	21.8	0.0	6.2	chr16	1110016	1110063	(89228282)	+	G-rich	Low_complexity	1	48	(0)	1395502
185	31.8	0.0	0.0	chr16	1110208	1110251	(89228094)	+	L2a	LINE/L2	3371	3414	(12)	1395503
201	37.4	6.8	4.3	chr16	1982517	1982639	(88355706)	+	L2b	LINE/L2	2655	2771	(648)	1396743
1816	14.3	3.0	1.7	chr16	1982640	1982933	(88355412)	+	AluJo	SINE/Alu	1	298	(14)	1396744
15	16.3	0.0	2.8	chr16	2022852	2022887	(88315458)	+	(CCCCTC)n	Simple_repeat	1	36	(0)	1396807
570	13.9	0.0	0.0	chr16	2249945	2250030	(88088315)	+	AluSx	SINE/Alu	216	301	(11)	1397096
1258	11.4	1.1	1.6	chr16	2250103	2250286	(88088059)	+	AluSx1	SINE/Alu	126	308	(4)	1397107
395	31.7	4.3	2.6	chr16	2351771	2352113	(87986232)	C	L1ME1	LINE/L1	(1644)	4502	4154	1397257
346	31.1	7.5	7.5	chr16	2352272	2352431	(87985914)	C	MER91A	DNA/hAT-Tip100	(36)	160	1	1397272
431	29.1	7.8	7.0	chr16	2352585	2353319	(87985026)	C	L1ME1	LINE/L1	(2181)	3965	3222	1397257
2348	10.8	0.0	0.0	chr16	2978466	2978762	(87359583)	+	AluSx	SINE/Alu	1	297	(15)	1398281
3623	22.3	5.2	3.4	chr16	2978763	2978804	(87359541)	+	L1M4b	LINE/L1	987	1028	(5839)	1398280
1538	14.6	0.0	0.0	chr16	2978805	2979023	(87359322)	C	AluSx	SINE/Alu	(10)	302	84	1398282
2101	13.6	1.0	0.0	chr16	2979054	2979363	(87358982)	+	AluSq2	SINE/Alu	1	313	(0)	1398283
672	0.0	0.0	0.0	chr16	3150674	3150746	(87187599)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1398597
2132	6.8	0.0	5.1	chr16	3151121	3151445	(87186900)	C	AluSp	SINE/Alu	(0)	313	2	1398598
15	20.2	2.0	4.0	chr16	3188533	3188581	(87149764)	+	G-rich	Low_complexity	1	50	(0)	1398694
484	26.2	0.5	0.5	chr16	3550924	3552102	(86786243)	+	(TCCA)n	Simple_repeat	1	1185	(0)	1399373
183	20.0	16.7	9.7	chr16	3552103	3552174	(86786171)	C	L2a	LINE/L2	(0)	3426	3349	1399374
793	28.4	13.1	1.8	chr16	4225593	4226235	(86112110)	+	L2a	LINE/L2	2570	3294	(132)	1400708
653	21.1	0.8	0.4	chr16	4226271	4227623	(86110722)	+	(TGGA)n	Simple_repeat	1	1364	(0)	1400709
60	1.8	0.0	0.0	chr16	4272948	4273003	(86065342)	+	(GT)n	Simple_repeat	1	56	(0)	1400804
19	30.2	0.0	6.4	chr16	4273125	4273233	(86065112)	+	G-rich	Low_complexity	1	109	(0)	1400805
16	0.0	0.0	0.0	chr16	4273331	4273347	(86064998)	+	(A)n	Simple_repeat	1	17	(0)	1400806
35	5.1	0.0	0.0	chr16	4387524	4387564	(85950781)	+	(CCACCT)n	Simple_repeat	1	41	(0)	1401042
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
1460	9.6	19.4	0.0	chr16	4767449	4767677	(85570668)	+	AluSp	SINE/Alu	3	286	(27)	1401814
33	0.0	2.6	2.5	chr16	4767678	4767716	(85570629)	+	(AAAT)n	Simple_repeat	1	40	(0)	1401815
2297	11.8	0.0	0.9	chr16	5499558	5499872	(84838473)	C	AluSx1	SINE/Alu	(0)	312	1	1403413
345	32.3	0.0	8.6	chr16	5499873	5499909	(84838436)	C	MIRb	SINE/MIR	(206)	62	26	1403412
64	12.6	0.8	3.2	chr16	5500073	5500194	(84838151)	+	(CCTC)n	Simple_repeat	1	123	(0)	1403414
35	11.0	0.0	0.0	chr16	5500196	5500255	(84838090)	+	(CATTC)n	Simple_repeat	1	60	(0)	1403415
1598	17.6	0.8	0.4	chr16	5500260	5500521	(84837824)	C	AluJr	SINE/Alu	(49)	263	1	1403416
848	20.3	9.1	0.4	chr16	7795856	7796127	(82542218)	C	L1MC5	LINE/L1	(15)	9289	8992	1407732
1231	22.5	6.0	7.5	chr16	7796146	7796582	(82541763)	C	L1MC5	LINE/L1	(447)	8857	8428	1407732
971	24.2	1.1	3.6	chr16	7796575	7796848	(82541497)	C	L1MC5	LINE/L1	(2018)	7286	7020	1407732
2077	21.5	5.8	7.5	chr16	8655096	8655653	(81682692)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	5	1409519
108	5.4	2.5	2.4	chr16	8711667	8711828	(81626517)	+	(GATG)n	Simple_repeat	1	166	(0)	1409676
22	23.5	0.0	0.0	chr16	8711832	8711886	(81626459)	+	(ATGG)n	Simple_repeat	1	55	(0)	1409677
2097	10.8	4.3	1.4	chr16	8711958	8712252	(81626093)	+	AluSz	SINE/Alu	1	304	(8)	1409678
2162	12.9	0.0	1.0	chr16	8793109	8793410	(81544935)	+	AluSx1	SINE/Alu	1	299	(13)	1409888
2897	20.2	3.5	6.8	chr16	8793412	8793826	(81544519)	+	L1MB4	LINE/L1	5490	5893	(287)	1409889
1960	14.5	1.3	0.0	chr16	8793827	8794122	(81544223)	+	AluSx1	SINE/Alu	1	300	(12)	1409890
226	16.7	13.5	2.6	chr16	10510005	10510081	(79828264)	+	MLT1D	LTR/ERVL-MaLR	8	90	(377)	1413589
1891	13.8	2.4	1.7	chr16	10510084	10510372	(79827973)	+	AluJr	SINE/Alu	1	291	(21)	1413590
139	25.0	4.1	4.1	chr16	11523809	11524392	(78813953)	+	(TCCA)n	Simple_repeat	1	608	(0)	1415882
403	18.8	0.2	3.9	chr16	11524393	11524490	(78813855)	C	MIR	SINE/MIR	(119)	111	23	1415883
17	4.3	0.0	0.0	chr16	11915649	11915672	(78422673)	+	(GCT)n	Simple_repeat	1	24	(0)	1416784
35	0.0	0.0	0.0	chr16	11915674	11915705	(78422640)	+	(CCG)n	Simple_repeat	1	32	(0)	1416785
13	22.7	0.0	0.0	chr16	11915898	11915929	(78422416)	+	(GCG)n	Simple_repeat	1	32	(0)	1416786
16	5.2	0.0	0.0	chr16	12525690	12525709	(77812636)	+	(C)n	Simple_repeat	1	20	(0)	1418117
19	19.7	0.0	2.1	chr16	12803887	12803934	(77534411)	+	G-rich	Low_complexity	1	48	(0)	1418653
646	18.5	5.6	7.2	chr16	12804069	12804249	(77534096)	+	MER53	DNA/hAT	2	179	(14)	1418654
55	37.0	1.9	1.5	chr16	13155049	13155369	(77182976)	+	(AATGG)n	Simple_repeat	1	327	(0)	1419515
186	14.7	0.0	0.0	chr16	14286571	14286604	(76051741)	+	MIRc	SINE/MIR	115	148	(120)	1421773
315	35.0	8.2	3.2	chr16	14630435	14630655	(75707690)	C	L2a	LINE/L2	(3)	3423	3191	1422532
1235	18.4	12.5	0.4	chr16	14630658	14630918	(75707427)	+	AluJo	SINE/Alu	3	299	(13)	1422533
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
2246	10.8	0.0	1.0	chr16	15591311	15591594	(74746751)	+	AluSc	SINE/Alu	1	282	(27)	1424783
159	36.6	1.0	1.4	chr16	15799915	15800597	(74537748)	+	(GATG)n	Simple_repeat	1	679	(0)	1425253
52	0.0	0.0	0.0	chr16	15800598	15800644	(74537701)	+	(TGGA)n	Simple_repeat	1	47	(0)	1425254
159	36.6	1.0	1.4	chr16	15800645	15800668	(74537677)	+	(GATG)n	Simple_repeat	4	28	(0)	1425255
2189	13.2	0.0	0.0	chr16	15800924	15801225	(74537120)	+	AluSz	SINE/Alu	1	302	(10)	1425256
1853	13.6	0.0	0.8	chr16	15945906	15946170	(74392175)	C	AluSx	SINE/Alu	(5)	307	45	1425673
1973	15.2	0.0	1.6	chr16	15946171	15946307	(74392038)	C	AluSz	SINE/Alu	(179)	133	1	1425672
1060	23.2	3.9	3.0	chr16	15946308	15946513	(74391832)	C	L1ME3	LINE/L1	(580)	5582	5378	1425666
201	6.7	0.0	0.0	chr16	15946514	15946543	(74391802)	+	L2a	LINE/L2	3397	3426	(0)	1425674
327	28.8	13.2	0.8	chr16	16158096	16158214	(74180131)	+	MIRc	SINE/MIR	21	156	(112)	1426224
307	30.1	0.0	1.1	chr16	16158210	16158303	(74180042)	C	MIRb	SINE/MIR	(0)	268	176	1426225
64	15.6	3.0	4.7	chr16	16158353	16158518	(74179827)	+	(ATCC)n	Simple_repeat	1	171	(0)	1426226
324	35.7	8.3	4.3	chr16	17238922	17239199	(73099146)	+	L2	LINE/L2	2483	2772	(647)	1428640
241	7.5	2.7	4.6	chr16	17239201	17239712	(73098633)	+	(CATC)n	Simple_repeat	1	526	(0)	1428641
51	28.9	1.1	3.1	chr16	17239730	17239919	(73098426)	+	(TCCA)n	Simple_repeat	1	192	(0)	1428642
201	32.5	4.3	10.3	chr16	17239923	17240097	(73098248)	C	L2c	LINE/L2	(2)	3385	3222	1428643
1381	14.5	6.6	5.6	chr16	19087031	19087188	(71251157)	C	AluJr	SINE/Alu	(8)	304	135	1432653
12	24.3	0.0	0.0	chr16	21502176	21502209	(68836136)	+	GA-rich	Low_complexity	1	34	(0)	1438015
18	8.5	0.0	0.0	chr16	21502548	21502572	(68835773)	+	(G)n	Simple_repeat	1	25	(0)	1438016
157	28.4	0.6	1.5	chr16	22161294	22161771	(68176574)	+	(GATG)n	Simple_repeat	1	481	(0)	1439412
1845	15.3	5.7	0.7	chr16	22161801	22162208	(68176137)	+	L1M4	LINE/L1	5222	5646	(538)	1439413
77	10.0	15.3	4.4	chr16	23225111	23225488	(67112857)	+	(TCCAT)n	Simple_repeat	1	436	(0)	1441710
298	5.7	0.0	0.0	chr16	23225518	23225552	(67112793)	C	U2	snRNA	(153)	35	1	1441711
640	28.1	0.5	7.5	chr16	23225571	23225809	(67112536)	+	MIR	SINE/MIR	31	252	(10)	1441712
1338	16.0	9.6	5.2	chr16	23452280	23452567	(66885778)	+	AluJo	SINE/Alu	1	302	(10)	1442305
6683	10.6	3.9	0.1	chr16	26752353	26753298	(63585047)	+	HSMAR1	DNA/TcMar-Mariner	1	983	(304)	1449624
361	30.4	1.6	0.8	chr16	26753360	26753485	(63584860)	C	L2a	LINE/L2	(5)	3421	3295	1449625
1006	22.4	1.9	0.5	chr16	26753487	26753692	(63584653)	+	MER58A	DNA/hAT-Charlie	3	211	(13)	1449626
439	14.7	1.1	0.3	chr16	28030719	28031472	(62306873)	+	G-rich	Low_complexity	1	762	(0)	1452517
326	26.0	13.0	3.8	chr16	28973908	28974039	(61364306)	+	MamRep1879	DNA/hAT-Tip100?	58	203	(13)	1454896
23	13.8	2.0	2.0	chr16	28974279	28974328	(61364017)	+	(TCCA)n	Simple_repeat	1	51	(0)	1454897
27	6.1	0.0	0.0	chr16	28974342	28974376	(61363969)	+	(TCCA)n	Simple_repeat	1	35	(0)	1454897
528	30.7	0.6	0.7	chr16	29196826	29197458	(61140887)	+	(TGGA)n	Simple_repeat	1	629	(0)	1455332
37	2.2	4.3	0.0	chr16	29197459	29197504	(61140841)	+	(GATG)n	Simple_repeat	1	48	(0)	1455333
528	30.7	0.6	0.7	chr16	29197505	29198439	(61139906)	+	(TGGA)n	Simple_repeat	2	938	(0)	1455334
2246	9.6	0.3	0.0	chr16	29691083	29691394	(60646951)	+	AluSq	SINE/Alu	1	313	(0)	1456319
1478	15.6	0.0	2.7	chr16	29691402	29691657	(60646688)	+	AluJb	SINE/Alu	5	253	(59)	1456320
23	10.9	0.0	2.4	chr16	29691994	29692035	(60646310)	+	(GTGTGC)n	Simple_repeat	1	42	(0)	1456321
15	27.4	2.9	2.8	chr16	29807510	29807578	(60530767)	+	(GCG)n	Simple_repeat	1	71	(0)	1456611
28	27.9	0.0	0.0	chr16	29815725	29815797	(60522548)	+	GA-rich	Low_complexity	1	73	(0)	1456621
1351	16.6	2.7	2.7	chr16	29943750	29943868	(60394477)	C	AluJb	SINE/Alu	(161)	151	27	1456928
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
1935	16.5	0.3	0.7	chr16	29944267	29944569	(60393776)	+	AluJb	SINE/Alu	1	302	(10)	1456932
2215	6.5	1.3	5.2	chr16	30075444	30075752	(60262593)	+	AluSp	SINE/Alu	1	297	(16)	1457215
26	0.0	0.0	0.0	chr16	30076007	30076031	(60262314)	+	(GCG)n	Simple_repeat	1	25	(0)	1457216
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
2046	7.2	11.0	0.0	chr16	30634914	30635189	(59703156)	+	AluSp	SINE/Alu	1	310	(3)	1458517
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
828	20.5	3.6	0.0	chr16	30877271	30877431	(59460914)	C	AluJo	SINE/Alu	(9)	303	137	1459070
193	32.0	15.9	2.2	chr16	31072717	31072895	(59265450)	+	L2c	LINE/L2	2911	3118	(269)	1459560
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
338	23.5	2.9	0.0	chr16	34063160	34063227	(56275118)	+	AluYh9	SINE/Alu	224	293	(18)	1463560
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
401	17.2	1.5	0.0	chr16	34064477	34064540	(56273805)	+	AluYj4	SINE/Alu	224	288	(23)	1463565
390	17.2	3.0	0.0	chr16	34064754	34064817	(56273528)	+	AluYj4	SINE/Alu	224	289	(22)	1463566
71	9.4	0.9	0.8	chr16	34064818	34064933	(56273412)	+	(GGAAT)n	Simple_repeat	1	117	(0)	1463567
271	28.1	0.0	0.0	chr16	34065378	34065441	(56272904)	+	AluYj4	SINE/Alu	224	287	(24)	1463569
416	14.1	4.5	0.0	chr16	34065560	34065623	(56272722)	+	AluYj4	SINE/Alu	224	290	(21)	1463570
366	9.1	0.0	0.0	chr16	34065828	34065871	(56272474)	+	AluYj4	SINE/Alu	224	267	(44)	1463571
325	21.3	3.2	0.0	chr16	34071217	34071277	(56267068)	+	AluYa8	SINE/Alu	225	287	(23)	1463577
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
297	19.8	1.0	0.0	chr16	34097894	34097955	(56240390)	C	AluY	SINE/Alu	(26)	275	224	1463602
418	15.6	3.0	0.0	chr16	34098164	34098227	(56240118)	C	AluYj4	SINE/Alu	(22)	289	224	1463605
45	7.2	2.7	1.3	chr16	34098503	34098577	(56239768)	+	(ATTCC)n	Simple_repeat	1	77	(0)	1463606
325	17.2	3.0	0.0	chr16	34098582	34098645	(56239700)	C	AluYj4	SINE/Alu	(22)	289	224	1463607
434	14.1	3.0	0.0	chr16	34099221	34099284	(56239061)	C	AluYj4	SINE/Alu	(22)	289	224	1463609
304	25.4	2.7	0.0	chr16	34099488	34099558	(56238787)	C	AluYj4	SINE/Alu	(13)	298	226	1463610
1143	16.0	0.4	0.2	chr16	34099855	34108438	(56229907)	C	ALR/Alpha	Satellite/centr	(57)	8603	1	1463611
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
14	23.2	5.3	1.7	chr16	47461027	47461083	(42877262)	+	(GCC)n	Simple_repeat	1	60	(0)	1467211
13	28.8	0.0	3.5	chr16	47461309	47461366	(42876979)	+	G-rich	Low_complexity	1	58	(0)	1467212
12	18.3	4.0	5.8	chr16	49382779	49382828	(40955517)	+	(TCCCTCT)n	Simple_repeat	1	52	(0)	1470441
274	26.0	9.4	0.0	chr16	49382892	49382987	(40955358)	C	LTR85b	LTR/Gypsy?	(596)	106	1	1470437
258	26.0	2.0	1.5	chr16	49506233	49506963	(40831382)	+	(TGGA)n	Simple_repeat	1	746	(0)	1470636
522	30.3	8.1	0.8	chr16	49507022	49507246	(40831099)	+	MIRc	SINE/MIR	22	266	(2)	1470637
713	19.3	2.2	3.7	chr16	50187932	50188066	(40150279)	C	AluJo	SINE/Alu	(179)	133	1	1472017
1022	26.8	7.9	9.9	chr16	50188067	50188623	(40149722)	C	Charlie29a	DNA/hAT-Charlie	(153)	566	13	1472015
2162	15.7	5.7	3.1	chr16	50396541	50397080	(39941265)	C	MLT2A2	LTR/ERVL	(0)	554	3	1472390
207	24.6	6.2	6.2	chr16	50397227	50397291	(39941054)	+	MIRc	SINE/MIR	46	110	(158)	1472391
199	25.9	6.6	2.3	chr16	50397288	50397357	(39940988)	C	L2c	LINE/L2	(258)	3129	3056	1472392
555	26.5	9.9	8.1	chr16	50397358	50397608	(39940737)	+	MIRb	SINE/MIR	1	256	(12)	1472393
18	22.7	4.8	4.5	chr16	53130468	53130551	(37207794)	+	(GGC)n	Simple_repeat	1	88	(0)	1477320
645	9.2	1.0	0.0	chr16	53737848	53737945	(36600400)	C	L1MB8	LINE/L1	(250)	5928	5830	1478339
506	17.5	0.0	0.0	chr16	53737946	53738025	(36600320)	C	AluJo	SINE/Alu	(4)	308	229	1478340
2306	7.1	1.4	0.0	chr16	53738026	53738305	(36600040)	C	AluSp	SINE/Alu	(13)	300	17	1478341
19	37.2	1.9	0.9	chr16	55689974	55690076	(34648269)	+	(TCAT)n	Simple_repeat	1	105	(0)	1481816
42	30.7	0.7	0.7	chr16	55690050	55690189	(34648156)	+	(CATC)n	Simple_repeat	1	141	(0)	1481817
411	28.5	5.4	0.0	chr16	55690210	55690332	(34648013)	C	L2c	LINE/L2	(2)	3385	3256	1481818
430	32.4	12.7	1.5	chr16	55690337	55690664	(34647681)	C	MamGypLTR1c	LTR/Gypsy	(10)	793	424	1481819
5041	22.3	3.5	4.1	chr16	57554676	57555205	(32783140)	C	L1ME1	LINE/L1	(3001)	3940	3399	1485302
1525	12.4	22.4	1.4	chr16	57555206	57555500	(32782845)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1485307
5041	22.3	3.5	4.1	chr16	57555501	57555775	(32782570)	C	L1ME1	LINE/L1	(3543)	3398	3111	1485302
250	30.9	4.0	1.0	chr16	57705190	57705287	(32633058)	C	L3	LINE/CR1	(88)	4011	3911	1485617
11	25.1	5.1	4.9	chr16	57706936	57707013	(32631332)	+	(CCACTCC)n	Simple_repeat	1	82	(0)	1485618
762	25.6	0.2	0.2	chr16	57728760	57730482	(32607863)	+	(GGAT)n	Simple_repeat	1	1726	(0)	1485662
909	14.4	11.7	1.4	chr16	58050332	58050477	(32287868)	+	FRAM	SINE/Alu	4	166	(10)	1486320
2243	11.4	0.7	0.3	chr16	58050506	58050813	(32287532)	+	AluSx1	SINE/Alu	1	309	(3)	1486321
243	12.7	8.7	6.0	chr16	58331718	58331784	(32006561)	C	L1MB5	LINE/L1	(0)	6174	6106	1486883
242	8.6	0.0	0.0	chr16	58331754	58331788	(32006557)	C	L1MB5	LINE/L1	(1)	6173	6139	1486884
2518	16.7	4.6	5.0	chr16	58331789	58332007	(32006338)	C	L1MB5	LINE/L1	(1)	6173	5958	1486885
40	2.2	0.0	4.0	chr16	58332008	58332057	(32006288)	+	(ATTT)n	Simple_repeat	1	50	(0)	1486886
2366	6.8	0.0	0.0	chr16	58332058	58332335	(32006010)	C	AluY	SINE/Alu	(28)	283	6	1486887
1162	20.0	3.4	3.1	chr16	58349423	58349727	(31988618)	+	L1MB2	LINE/L1	5856	6171	(9)	1486918
19	4.5	0.0	0.0	chr16	58349728	58349750	(31988595)	+	(T)n	Simple_repeat	1	23	(0)	1486919
6381	13.2	3.2	1.1	chr16	58350056	58351357	(31986988)	+	L1MA6	LINE/L1	4973	6299	(1)	1486920
2056	18.6	7.8	6.5	chr16	58391076	58391568	(31946777)	C	MER74B	LTR/ERVL	(67)	555	56	1486996
426	29.7	9.1	5.4	chr16	58391662	58391882	(31946463)	+	MLT1M	LTR/ERVL-MaLR	59	288	(384)	1486997
283	31.9	9.7	9.4	chr16	66502516	66502892	(23835453)	+	L2b	LINE/L2	2426	2781	(638)	1499854
894	15.0	0.0	2.1	chr16	66502893	66503032	(23835313)	+	FLAM_C	SINE/Alu	1	137	(6)	1499855
2011	11.3	1.0	3.1	chr16	66867369	66867686	(23470659)	C	AluSx1	SINE/Alu	(1)	311	1	1500580
425	24.6	3.0	5.1	chr16	66867687	66867801	(23470544)	C	MIRb	SINE/MIR	(112)	156	40	1500579
54	0.0	0.0	0.0	chr16	66867872	66867917	(23470428)	+	(AC)n	Simple_repeat	1	46	(0)	1500581
2089	13.1	0.0	3.5	chr16	66982848	66983160	(23355185)	+	AluSz	SINE/Alu	1	302	(10)	1500812
2178	15.2	1.2	7.4	chr16	66983161	66983480	(23354865)	C	L1M4b	LINE/L1	(3698)	3169	2883	1500806
21	22.3	4.4	4.3	chr16	67326772	67326861	(23011484)	+	(GGCG)n	Simple_repeat	1	94	(0)	1501441
13	4.1	0.0	9.7	chr16	67660948	67660978	(22677367)	+	(GGGC)n	Simple_repeat	1	31	(0)	1502113
1801	16.4	1.0	5.8	chr16	67768108	67768238	(22570107)	+	AluJb	SINE/Alu	1	133	(179)	1502307
2165	12.8	0.3	0.3	chr16	67768239	67768550	(22569795)	+	AluSz6	SINE/Alu	1	312	(0)	1502308
464	27.9	10.1	1.4	chr16	68528539	68528745	(21809600)	+	MIRb	SINE/MIR	1	227	(41)	1503704
1618	9.9	6.0	14.4	chr16	68529246	68529578	(21808767)	C	AluJo	SINE/Alu	(9)	303	1	1503705
21	6.0	0.0	5.1	chr16	68539679	68539717	(21798628)	+	(GGGGC)n	Simple_repeat	1	39	(0)	1503727
12	4.7	0.0	7.7	chr16	68539854	68539879	(21798466)	+	(CATC)n	Simple_repeat	1	26	(0)	1503728
18	22.4	0.0	0.0	chr16	68540317	68540353	(21797992)	+	A-rich	Low_complexity	1	37	(0)	1503729
1922	14.8	0.0	5.3	chr16	69123806	69124123	(21214222)	+	AluSx3	SINE/Alu	1	301	(10)	1505124
2312	10.7	1.0	0.0	chr16	69159706	69160014	(21178331)	+	AluSx1	SINE/Alu	1	312	(0)	1505205
424	26.5	4.3	1.5	chr16	69530480	69530613	(20807732)	+	MIR	SINE/MIR	23	160	(102)	1506009
729	16.6	0.8	4.3	chr16	70299628	70299766	(20038579)	C	FLAM_C	SINE/Alu	(9)	134	1	1507661
269	30.8	5.1	4.4	chr16	70299768	70299911	(20038434)	+	L2c	LINE/L2	3212	3370	(17)	1507662
563	28.0	16.4	8.1	chr16	70413799	70414132	(19924213)	C	L1MEi	LINE/L1	(1837)	375	9	1507928
636	2.7	0.0	0.0	chr16	70779036	70779109	(19559236)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	1508603
305	34.6	6.2	9.4	chr16	71659087	71659247	(18679098)	+	MIR3	SINE/MIR	6	164	(44)	1510103
26290	4.2	0.1	0.2	chr16	72580799	72586932	(17751413)	+	L1PA4	LINE/L1	12	6144	(11)	1511683
13	9.7	2.6	5.1	chr16	74984289	74984315	(15354030)	+	(AATTA)n	Simple_repeat	2	26	(0)	1515867
236	28.0	21.9	1.4	chr16	74984322	74984466	(15353879)	C	MIR	SINE/MIR	(77)	185	3	1515868
248	34.9	3.4	14.7	chr16	75072272	75072546	(15265799)	+	L2b	LINE/L2	3102	3353	(34)	1516051
16	10.5	3.2	0.0	chr16	75250885	75250915	(15087430)	+	(CGCTCC)n	Simple_repeat	1	32	(0)	1516382
188	20.3	8.0	6.8	chr16	75251092	75251165	(15087180)	C	MIR3	SINE/MIR	(53)	155	81	1516383
16	17.5	2.6	0.0	chr16	75555731	75555769	(14782576)	+	(CCCCAT)n	Simple_repeat	1	40	(0)	1517047
2386	7.9	0.0	0.0	chr16	75565390	75565680	(14772665)	C	AluSx1	SINE/Alu	(21)	291	1	1517067
21	27.4	5.8	2.4	chr16	75566366	75566485	(14771860)	+	(CCGCTG)n	Simple_repeat	1	127	(0)	1517068
854	16.9	0.0	0.7	chr16	75593657	75593792	(14744553)	+	FLAM_C	SINE/Alu	1	135	(8)	1517120
2718	15.0	4.2	4.8	chr16	75593797	75594320	(14744025)	C	MER74A	LTR/ERVL	(5)	553	33	1517121
1739	27.2	9.9	3.7	chr16	77345799	77346393	(12991952)	+	L2a	LINE/L2	2788	3421	(5)	1519663
14	12.0	5.3	2.5	chr16	79591265	79591302	(10747043)	+	G-rich	Low_complexity	1	40	(0)	1523825
1280	27.0	5.8	6.0	chr16	80396400	80396503	(9941842)	C	MLT1G1	LTR/ERVL-MaLR	(430)	149	3	1525211
110	12.9	2.1	4.2	chr16	80396569	80396801	(9941544)	+	(AATGG)n	Simple_repeat	1	238	(0)	1525213
227	31.7	9.1	2.4	chr16	80396838	80397125	(9941220)	+	L1MC5	LINE/L1	4811	5119	(1027)	1525203
192	27.6	12.1	0.0	chr16	81007744	81007801	(9330544)	C	L2a	LINE/L2	(2)	3424	3359	1526294
2324	9.9	0.0	0.0	chr16	81007825	81008127	(9330218)	+	AluSx1	SINE/Alu	1	303	(9)	1526295
471	34.6	7.6	6.3	chr16	83967168	83967364	(6370981)	+	L2a	LINE/L2	3241	3426	(0)	1531947
326	18.8	2.0	1.0	chr16	83967365	83968058	(6370287)	+	(GGAT)n	Simple_repeat	1	708	(0)	1531949
504	25.7	0.8	0.2	chr16	84324755	84325206	(6013139)	+	(TCCA)n	Simple_repeat	1	456	(0)	1532601
507	26.6	16.9	4.0	chr16	84534476	84534752	(5803593)	+	L3	LINE/CR1	2884	3207	(892)	1533005
91	22.3	4.2	3.4	chr16	84534940	84535248	(5803097)	+	(CTTCTC)n	Simple_repeat	1	322	(0)	1533007
422	23.3	4.1	0.3	chr16	85345852	85346960	(4991385)	+	(GATG)n	Simple_repeat	1	1154	(0)	1534683
988	33.5	4.9	2.3	chr16	85387339	85387815	(4950530)	+	L2a	LINE/L2	2937	3426	(0)	1534754
499	19.4	0.0	0.0	chr16	85387828	85388756	(4949589)	+	(ATGG)n	Simple_repeat	1	929	(0)	1534755
17	0.0	0.0	0.0	chr16	85652546	85652566	(4685779)	+	(GGC)n	Simple_repeat	1	21	(0)	1535176
258	26.9	3.7	16.1	chr16	86016254	86016408	(4321937)	C	MIR3	SINE/MIR	(38)	170	36	1535863
12	14.9	8.1	0.0	chr16	86510202	86510238	(3828107)	+	(CGGCCT)n	Simple_repeat	1	40	(0)	1536781
14	29.0	3.2	1.6	chr16	86510251	86510312	(3828033)	+	G-rich	Low_complexity	1	64	(0)	1536782
14	13.0	5.9	0.0	chr16	86510351	86510384	(3827961)	+	G-rich	Low_complexity	1	36	(0)	1536782
27	3.5	0.0	0.0	chr16	86510482	86510511	(3827834)	+	(TCC)n	Simple_repeat	1	30	(0)	1536783
19	20.8	1.7	1.7	chr16	86510512	86510563	(3827782)	+	(CGGCGG)n	Simple_repeat	6	57	(0)	1536784
28	5.3	2.6	0.0	chr16	86510605	86510643	(3827702)	+	(CGG)n	Simple_repeat	1	40	(0)	1536785
230	23.5	4.2	0.0	chr16	87558614	87558681	(2779664)	C	L1ME2z	LINE/L1	(102)	6342	6272	1538661
155	22.6	0.3	0.0	chr16	87558687	87559012	(2779333)	+	(CATC)n	Simple_repeat	1	327	(0)	1538662
378	25.2	9.0	0.0	chr16	87559013	87559143	(2779202)	C	L1ME2z	LINE/L1	(125)	6319	6176	1538663
401	26.4	0.8	1.2	chr16	88162944	88163612	(2174733)	+	(TGGA)n	Simple_repeat	1	665	(0)	1539616
47	0.0	0.0	0.0	chr16	88163613	88163655	(2174690)	+	(GATG)n	Simple_repeat	1	43	(0)	1539617
401	32.0	0.8	1.1	chr16	88163656	88164016	(2174329)	+	(TGGA)n	Simple_repeat	4	366	(0)	1539618
36	6.0	1.8	1.8	chr16	88164017	88164071	(2174274)	+	(ATGGATGA)n	Simple_repeat	1	56	(0)	1539619
401	32.0	0.8	1.1	chr16	88164072	88164533	(2173812)	+	(TGGA)n	Simple_repeat	3	465	(0)	1539620
457	25.2	0.1	0.3	chr16	88243644	88243911	(2094434)	+	(TGGA)n	Simple_repeat	1	266	(0)	1539723
48	0.0	0.0	0.0	chr16	88243912	88243952	(2094393)	+	(AT)n	Simple_repeat	1	41	(0)	1539724
457	25.2	0.1	0.3	chr16	88243953	88244744	(2093601)	+	(TGGA)n	Simple_repeat	3	795	(0)	1539725
1082	36.0	0.8	0.0	chr16	88518219	88521140	(1817205)	+	(GGTG)n	Simple_repeat	2	2947	(0)	1540059
364	19.7	9.9	0.0	chr16	88664133	88664259	(1674086)	C	L1MB4	LINE/L1	(52)	6128	5988	1540290
1160	21.6	0.7	3.8	chr16	89363782	89364068	(974277)	+	AluJr	SINE/Alu	9	286	(26)	1541143
9943	15.6	7.2	5.7	chr16	89375792	89376437	(961908)	+	Tigger2	DNA/TcMar-Tigger	539	1160	(1558)	1541163
2119	11.3	0.0	0.3	chr16	89376438	89376738	(961607)	C	AluSx1	SINE/Alu	(12)	300	1	1541164
2260	8.8	0.7	0.7	chr16	89579009	89579304	(759041)	+	AluSx3	SINE/Alu	1	296	(15)	1541502
315	24.4	7.8	3.2	chr16	89579305	89579402	(758943)	C	L1ME2	LINE/L1	(24)	6140	6036	1541501
13	32.4	1.6	1.5	chr16	89586869	89586932	(751413)	+	GA-rich	Low_complexity	1	65	(0)	1541507
568	28.2	12.6	0.5	chr17	222157	222352	(83035089)	C	MIR	SINE/MIR	(38)	224	2	1544824
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
2230	8.9	0.0	2.0	chr17	980696	980997	(82276444)	+	AluSg4	SINE/Alu	1	296	(14)	1546162
971	9.2	0.8	0.0	chr17	996420	996550	(82260891)	C	AluSx3	SINE/Alu	(179)	132	1	1546196
715	29.6	9.9	1.9	chr17	1174605	1174921	(82082520)	+	MamTip3	DNA/hAT-Tip100	156	500	(0)	1546500
21	18.1	0.0	0.0	chr17	1175024	1175061	(82082380)	+	A-rich	Low_complexity	1	38	(0)	1546501
2447	6.5	0.0	0.0	chr17	1175130	1175423	(82082018)	+	AluSx1	SINE/Alu	1	294	(18)	1546502
1623	11.1	5.9	6.2	chr17	1259671	1259976	(81997465)	+	AluY	SINE/Alu	2	306	(5)	1546710
2470	4.4	1.3	0.0	chr17	1323552	1323846	(81933595)	+	AluSq2	SINE/Alu	1	299	(14)	1546850
252	29.6	10.6	13.1	chr17	1323856	1323895	(81933546)	+	MER5B	DNA/hAT-Charlie	1	52	(126)	1546851
53	0.0	0.0	0.0	chr17	1323896	1323940	(81933501)	+	(AC)n	Simple_repeat	1	45	(0)	1546852
252	29.6	10.6	13.1	chr17	1323941	1324074	(81933367)	+	MER5B	DNA/hAT-Charlie	53	169	(9)	1546851
366	30.3	11.1	3.7	chr17	1618201	1618416	(81639025)	+	MIR	SINE/MIR	14	247	(15)	1547478
13	15.9	0.0	0.0	chr17	1685202	1685229	(81572212)	+	(CATT)n	Simple_repeat	1	28	(0)	1547584
193	4.9	4.0	3.9	chr17	2679326	2679671	(80577770)	+	(ATGG)n	Simple_repeat	1	360	(0)	1549723
498	30.1	7.7	3.5	chr17	2679716	2680087	(80577354)	C	L1MC4	LINE/L1	(105)	7937	7549	1549724
421	6.9	2.7	2.4	chr17	3519320	3520019	(79737422)	+	(ATGG)n	Simple_repeat	1	719	(0)	1551172
2261	12.0	0.3	0.3	chr17	4028267	4028566	(79228875)	+	AluSx1	SINE/Alu	1	300	(12)	1552214
559	15.6	13.5	3.9	chr17	4028570	4028722	(79228719)	+	L1MEc	LINE/L1	2295	2464	(3936)	1552208
412	20.5	4.9	0.0	chr17	4028809	4028886	(79228555)	+	MER2B	DNA/TcMar-Tigger	254	335	(1)	1552215
308	30.9	8.5	1.0	chr17	4028890	4028987	(79228454)	+	L1MEc	LINE/L1	2471	2576	(3743)	1552208
1662	25.1	1.8	10.3	chr17	4028988	4029614	(79227827)	+	L1MD	LINE/L1	2511	3078	(3068)	1552216
2499	7.4	0.0	0.0	chr17	4264924	4265222	(78992219)	+	AluSx	SINE/Alu	1	299	(13)	1552644
229	31.1	1.9	3.7	chr17	4265314	4265420	(78992021)	C	L2	LINE/L2	(2673)	746	642	1552645
814	17.2	3.0	0.0	chr17	4265437	4265564	(78991877)	C	FLAM_C	SINE/Alu	(11)	132	1	1552646
892	18.5	0.6	4.3	chr17	4265703	4265886	(78991555)	+	AluJo	SINE/Alu	132	308	(4)	1552647
772	2.3	1.2	1.2	chr17	4462078	4462894	(78794547)	+	(CATC)n	Simple_repeat	1	827	(0)	1553145
231	22.1	16.7	3.1	chr17	4586343	4586440	(78671001)	C	Charlie22a	DNA/hAT-Charlie	(153)	338	225	1553356
13	26.7	0.0	0.0	chr17	4672024	4672064	(78585377)	+	(AGGTGG)n	Simple_repeat	1	41	(0)	1553514
589	7.0	0.0	0.0	chr17	4709598	4709668	(78547773)	+	AluSz6	SINE/Alu	242	312	(0)	1553586
189	33.5	10.3	7.3	chr17	4709672	4709916	(78547525)	+	L2b	LINE/L2	3095	3347	(28)	1553587
18	29.6	1.1	4.5	chr17	4709917	4710003	(78547438)	+	(GGAT)n	Simple_repeat	1	88	(0)	1553588
287	32.9	10.3	2.8	chr17	4730608	4730857	(78526584)	+	L2	LINE/L2	2795	3065	(354)	1553635
1913	9.8	1.8	0.0	chr17	4730911	4731186	(78526255)	+	AluSx1	SINE/Alu	15	295	(17)	1553636
2207	10.7	0.3	0.7	chr17	5502292	5502590	(77754851)	C	AluSz	SINE/Alu	(14)	298	1	1555259
1823	24.1	4.8	6.4	chr17	5585821	5586370	(77671071)	C	MER21C	LTR/ERVL	(56)	882	342	1555411
683	26.9	3.3	2.4	chr17	5586374	5586586	(77670855)	+	L2a	LINE/L2	2636	2850	(569)	1555412
323	31.6	6.9	2.6	chr17	6060385	6060579	(77196862)	C	L2a	LINE/L2	(3)	3423	3220	1556325
468	25.2	11.2	0.0	chr17	6525792	6525962	(76731479)	+	MIRb	SINE/MIR	69	267	(1)	1557257
258	5.6	0.0	0.0	chr17	7296286	7296334	(75961107)	+	FLAM_C	SINE/Alu	1	34	(99)	1558578
3372	17.9	6.1	4.2	chr17	7767107	7767728	(75489713)	C	L1MB5	LINE/L1	(170)	6004	5376	1559486
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
281	35.8	1.7	6.0	chr17	8762974	8763157	(74494284)	C	LTR101_Mam	LTR/ERVL	(45)	784	609	1561421
1843	18.6	5.2	4.2	chr17	8927707	8928115	(74329326)	+	MSTB1	LTR/ERVL-MaLR	17	419	(13)	1561731
590	15.7	0.8	0.1	chr17	8928150	8928259	(74329182)	+	L1MD1	LINE/L1	1431	1610	(5023)	1561730
4855	17.4	3.5	2.0	chr17	8928304	8929605	(74327836)	+	L1MD1	LINE/L1	1552	2927	(3610)	1561730
2083	10.1	1.4	0.0	chr17	9818529	9818651	(73438790)	C	AluSq2	SINE/Alu	(185)	128	5	1563477
2129	19.2	0.3	2.1	chr17	9818652	9818794	(73438647)	C	MSTA	LTR/ERVL-MaLR	(245)	183	48	1563475
290	30.9	0.3	0.5	chr17	10846407	10847301	(72410140)	+	(GTGGTG)n	Simple_repeat	1	898	(0)	1565404
2148	12.2	0.0	1.4	chr17	13107184	13107478	(70149963)	+	AluSz	SINE/Alu	1	291	(21)	1569232
295	24.4	15.3	2.3	chr17	13107562	13107691	(70149750)	+	MER113A	DNA/hAT-Charlie	2	151	(163)	1569233
208	19.1	3.2	7.1	chr17	13416078	13416163	(69841278)	C	L2b	LINE/L2	(6)	3381	3301	1569755
2084	11.6	2.7	0.0	chr17	14068933	14069216	(69188225)	C	AluJr	SINE/Alu	(20)	292	1	1570862
2071	13.7	0.0	0.0	chr17	14456129	14456405	(68801036)	+	AluSx	SINE/Alu	28	304	(8)	1571484
1199	28.5	14.3	4.9	chr17	14456444	14457231	(68800210)	C	HAL1	LINE/L1	(604)	1903	1047	1571483
387	29.5	3.2	1.4	chr17	14458348	14458560	(68798881)	C	HAL1	LINE/L1	(604)	1903	1687	1571486
344	23.5	13.9	3.2	chr17	16214364	16214517	(67042924)	+	Tigger19a	DNA/TcMar-Tigger	60	232	(91)	1574431
2142	13.7	8.3	4.9	chr17	16267014	16267443	(66989998)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2273	1574565
481	7.4	2.9	1.4	chr17	16267433	16267501	(66989940)	C	MER8	DNA/TcMar-Tigger	(169)	70	1	1574566
948	19.1	5.4	0.0	chr17	16267558	16267714	(66989727)	+	FRAM	SINE/Alu	1	166	(10)	1574567
935	17.1	4.7	0.6	chr17	16340428	16340591	(66916850)	C	AluJo	SINE/Alu	(6)	306	136	1574746
20	14.3	0.0	0.0	chr17	16340652	16340687	(66916754)	+	(TTGA)n	Simple_repeat	1	36	(0)	1574747
2256	8.2	1.1	0.0	chr17	16340688	16340968	(66916473)	C	AluSq2	SINE/Alu	(28)	285	2	1574748
1267	12.7	21.7	0.4	chr17	16386331	16386566	(66870875)	+	AluSz6	SINE/Alu	3	302	(10)	1574868
1106	14.0	0.0	0.0	chr17	16386580	16386743	(66870698)	+	AluJr	SINE/Alu	139	302	(10)	1574869
35	2.8	0.0	0.0	chr17	17042418	17042454	(66214987)	+	(CGCC)n	Simple_repeat	1	37	(0)	1576015
11	28.0	2.3	0.0	chr17	17042584	17042627	(66214814)	+	(GGCCCGC)n	Simple_repeat	1	45	(0)	1576016
984	26.9	6.4	1.8	chr17	17613827	17614167	(65643274)	+	L1MC5	LINE/L1	8576	8933	(371)	1576971
441	33.9	3.3	0.6	chr17	17667316	17667490	(65589951)	C	MIRb	SINE/MIR	(82)	186	7	1577113
1708	16.9	1.8	0.4	chr17	17776659	17776963	(65480478)	C	AluJo	SINE/Alu	(0)	312	1	1577332
374	27.4	21.9	4.5	chr17	17776964	17777302	(65480139)	C	L1ME4b	LINE/L1	(236)	656	245	1577330
216	33.8	4.0	3.7	chr17	21235565	21235772	(62021669)	+	L2a	LINE/L2	2911	3120	(267)	1583899
2326	8.7	0.3	0.7	chr17	21322673	21322981	(61934460)	+	AluSx1	SINE/Alu	1	308	(4)	1584074
349	21.8	1.3	0.0	chr17	21323125	21323202	(61934239)	C	MLT1J	LTR/ERVL-MaLR	(336)	176	98	1584075
145	30.8	0.9	0.5	chr17	21356587	21356663	(61900778)	+	(CCAT)n	Simple_repeat	1	78	(0)	1584138
69	8.1	0.0	0.0	chr17	21356664	21356756	(61900685)	+	(ATCC)n	Simple_repeat	1	93	(0)	1584139
145	30.8	0.9	0.5	chr17	21356757	21357121	(61900320)	+	(CCAT)n	Simple_repeat	3	368	(0)	1584140
448	29.8	0.9	0.6	chr17	21362200	21363486	(61893955)	+	(GATG)n	Simple_repeat	1	1299	(0)	1584148
401	24.1	1.1	0.9	chr17	21407092	21408055	(61849386)	+	(CATC)n	Simple_repeat	1	975	(0)	1584234
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
14076	21.5	0.2	0.1	chr17	26876741	26878758	(56378683)	+	(TGGAA)n	Simple_repeat	3	2025	(0)	1585974
301	19.1	3.1	0.0	chr17	26878759	26878821	(56378620)	+	AluYj4	SINE/Alu	224	288	(23)	1585975
14076	21.5	0.2	0.1	chr17	26878821	26878874	(56378567)	+	(TGGAA)n	Simple_repeat	1	53	(0)	1585976
35	6.8	0.0	0.0	chr17	26878875	26878920	(56378521)	+	(AGTGG)n	Simple_repeat	1	46	(0)	1585977
14076	21.5	0.2	0.1	chr17	26878921	26879385	(56378056)	+	(TGGAA)n	Simple_repeat	4	470	(0)	1585978
354	19.1	1.6	0.0	chr17	26879386	26879448	(56377993)	+	AluYj4	SINE/Alu	224	287	(24)	1585979
14076	21.5	0.2	0.1	chr17	26879448	26880125	(56377316)	+	(TGGAA)n	Simple_repeat	1	678	(0)	1585980
357	17.5	3.1	0.0	chr17	26880137	26880199	(56377242)	+	AluYj4	SINE/Alu	224	288	(23)	1585981
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
1545	18.6	0.5	0.9	chr17	26939888	26940398	(56317043)	+	(GAATG)n	Satellite	3	514	(0)	1585998
301	22.2	3.1	0.0	chr17	26940399	26940461	(56316980)	+	AluYj4	SINE/Alu	224	288	(23)	1585999
1545	18.6	0.5	0.9	chr17	26940461	26941027	(56316414)	+	(GAATG)n	Satellite	4	569	(0)	1586000
20	25.6	3.7	0.9	chr17	28041410	28041481	(55215960)	+	A-rich	Low_complexity	1	74	(0)	1587976
13	16.2	2.7	2.6	chr17	28041431	28041467	(55215974)	+	GA-rich	Low_complexity	1	38	(0)	1587977
18	10.5	0.0	0.0	chr17	29294512	29294543	(53962898)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1590289
18	23.6	2.2	6.5	chr17	29930050	29930066	(53327375)	+	G-rich	Low_complexity	1	87	(0)	1591635
17	26.2	4.4	0.0	chr17	29930067	29930134	(53327307)	+	(GGAGCGG)n	Simple_repeat	1	71	(0)	1591636
2465	19.7	3.2	1.1	chr17	30002435	30002984	(53254457)	C	L1MDa	LINE/L1	(4323)	2310	1749	1591758
739	17.7	2.7	15.0	chr17	30002995	30003230	(53254211)	C	L1MDa	LINE/L1	(5082)	1551	1347	1591758
15	25.3	1.9	1.8	chr17	30379573	30379626	(52877815)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	1592485
2736	21.2	10.8	3.9	chr17	30400977	30401191	(52856250)	C	L1MEf	LINE/L1	(4719)	1523	1337	1592524
77	30.4	1.8	0.7	chr17	30401195	30401476	(52855965)	+	(CTGCTT)n	Simple_repeat	1	285	(0)	1592527
229	32.4	1.2	4.5	chr17	30401477	30401500	(52855941)	C	L1MEf	LINE/L1	(4497)	2352	2330	1592528
1893	16.6	0.0	0.7	chr17	30401501	30401784	(52855657)	C	AluJb	SINE/Alu	(29)	283	2	1592529
930	31.4	8.4	3.4	chr17	32761253	32761818	(50495623)	+	L2	LINE/L2	1901	2497	(922)	1597361
25	28.1	0.0	6.6	chr17	35089283	35089292	(48168149)	+	(CCCCG)n	Simple_repeat	1	25	(96)	1601649
12	24.0	3.9	6.2	chr17	35089293	35089369	(48168072)	+	(CCCAGC)n	Simple_repeat	1	80	(0)	1601650
25	28.1	0.0	6.6	chr17	35089370	35089403	(48168038)	+	(CCCCG)n	Simple_repeat	26	121	(0)	1601649
5815	5.9	1.6	5.1	chr17	35230626	35231444	(48025997)	C	L1PA13	LINE/L1	(18)	6145	5356	1601966
19	22.2	1.9	0.0	chr17	36948809	36948860	(46308581)	+	(CGCGCA)n	Simple_repeat	1	53	(0)	1604977
2603	28.9	8.9	6.4	chr17	39137578	39137931	(44119510)	+	HAL1	LINE/L1	1570	1948	(559)	1609395
1692	18.8	3.2	1.0	chr17	39137932	39138235	(44119206)	C	AluJb	SINE/Alu	(1)	311	1	1609397
299	21.3	15.0	1.8	chr17	40251639	40251748	(43005693)	+	MIRc	SINE/MIR	10	136	(132)	1611694
208	27.1	2.0	0.0	chr17	40251757	40251813	(43005628)	+	MIRc	SINE/MIR	104	161	(69)	1611695
496	25.4	3.5	0.0	chr17	40251971	40252080	(43005361)	C	FLAM_A	SINE/Alu	(20)	122	9	1611696
195	25.4	0.0	8.3	chr17	40287313	40287372	(42970069)	+	MIR3	SINE/MIR	40	94	(114)	1611780
385	35.5	12.5	5.3	chr17	40486381	40486963	(42770478)	+	L2b	LINE/L2	2741	3372	(3)	1612149
2583	8.4	0.0	0.0	chr17	40665443	40665753	(42591688)	+	AluSx1	SINE/Alu	2	312	(0)	1612461
71	40.3	0.2	1.6	chr17	41567291	41567720	(41689721)	+	(TCCACC)n	Simple_repeat	1	431	(0)	1613833
2157	12.6	0.3	0.0	chr17	41735358	41735658	(41521783)	+	AluSx	SINE/Alu	2	303	(9)	1614164
203	35.4	0.0	1.2	chr17	41737904	41737986	(41519455)	+	L2b	LINE/L2	3289	3370	(5)	1614170
214	24.1	17.1	2.2	chr17	41738204	41738292	(41519149)	C	MIRc	SINE/MIR	(49)	219	115	1614171
1757	15.2	1.0	2.4	chr17	42602660	42602955	(40654486)	+	AluJb	SINE/Alu	1	292	(20)	1615966
275	31.0	9.4	2.0	chr17	42602956	42603071	(40654370)	C	L1M5	LINE/L1	(661)	5463	5342	1615965
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
31	0.0	0.0	0.0	chr17	43530610	43530636	(39726805)	+	(GT)n	Simple_repeat	1	27	(0)	1618040
13	16.8	0.0	0.0	chr17	43530719	43530746	(39726695)	+	(CATTC)n	Simple_repeat	1	28	(0)	1618041
497	24.8	1.8	15.2	chr17	43556132	43556351	(39701090)	C	L1ME4b	LINE/L1	(29)	863	668	1618092
12	23.3	2.5	0.0	chr17	43556688	43556727	(39700714)	+	(AGAAGTG)n	Simple_repeat	1	41	(0)	1618094
2233	10.0	0.0	0.0	chr17	43556850	43557148	(39700293)	C	AluSz	SINE/Alu	(13)	299	1	1618095
1751	11.7	5.4	0.4	chr17	43576278	43576587	(39680854)	C	AluSx4	SINE/Alu	(0)	310	2	1618142
372	29.5	0.9	0.0	chr17	43576920	43577031	(39680410)	C	MIR3	SINE/MIR	(57)	151	39	1618143
12	21.6	0.0	0.0	chr17	43906518	43906549	(39350892)	+	(TCCA)n	Simple_repeat	1	32	(0)	1618830
12	19.6	2.9	0.0	chr17	44123383	44123417	(39134024)	+	(GGAGCGC)n	Simple_repeat	1	36	(0)	1619259
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
27	0.0	0.0	5.7	chr17	44220905	44220939	(39036502)	+	(CCGC)n	Simple_repeat	1	35	(0)	1619467
16	20.5	4.5	4.3	chr17	44221524	44221590	(39035851)	+	(CCTCCTG)n	Simple_repeat	1	70	(0)	1619468
1428	13.4	3.3	1.3	chr17	44522697	44522934	(38734507)	+	AluJb	SINE/Alu	2	244	(68)	1620137
310	27.7	9.8	2.3	chr17	44689917	44690110	(38567331)	C	MIRb	SINE/MIR	(47)	221	3	1620501
476	18.6	1.0	2.9	chr17	44690379	44690483	(38566958)	C	MIRb	SINE/MIR	(36)	232	130	1620502
2100	9.2	5.8	0.3	chr17	44690485	44690620	(38566821)	+	AluSx	SINE/Alu	1	136	(176)	1620503
2336	9.4	0.3	0.0	chr17	44690621	44690927	(38566514)	+	AluSp	SINE/Alu	1	308	(5)	1620504
1910	9.6	10.0	0.4	chr17	44842126	44842405	(38415036)	+	AluSx	SINE/Alu	1	310	(2)	1620845
13	20.0	2.4	2.3	chr17	45317001	45317042	(37940399)	+	(CCGCCGA)n	Simple_repeat	1	43	(0)	1621778
13	24.6	3.3	3.2	chr17	45317023	45317083	(37940358)	+	G-rich	Low_complexity	1	63	(0)	1621779
243	32.3	8.5	3.0	chr17	45332330	45332531	(37924910)	+	L2b	LINE/L2	3185	3387	(0)	1621822
262	26.9	1.3	0.0	chr17	45332833	45332910	(37924531)	C	L1ME4b	LINE/L1	(294)	598	520	1621823
433	16.8	13.6	0.0	chr17	45948996	45949090	(37308351)	C	L1MB7	LINE/L1	(0)	6184	6075	1623100
188	30.2	2.8	1.6	chr17	45969346	45969545	(37287896)	+	(CCAT)n	Simple_repeat	1	200	(0)	1623143
30	5.7	0.0	0.0	chr17	45969546	45969582	(37287859)	+	(CATC)n	Simple_repeat	1	37	(0)	1623144
188	30.2	2.8	1.6	chr17	45969583	45969648	(37287793)	+	(CCAT)n	Simple_repeat	1	67	(0)	1623145
30	5.7	0.0	0.0	chr17	45969649	45969685	(37287756)	+	(CATC)n	Simple_repeat	1	37	(0)	1623146
188	30.2	2.8	1.6	chr17	45969686	45969933	(37287508)	+	(CCAT)n	Simple_repeat	4	258	(0)	1623147
86	8.7	3.3	2.7	chr17	45969934	45970115	(37287326)	+	(CATC)n	Simple_repeat	1	188	(0)	1623148
188	30.2	2.8	1.6	chr17	45970116	45970376	(37287065)	+	(CCAT)n	Simple_repeat	3	265	(0)	1623149
31	10.7	0.0	0.0	chr17	45970379	45970430	(37287011)	+	(CATC)n	Simple_repeat	1	52	(0)	1623150
2255	12.9	0.0	0.3	chr17	46112088	46112398	(37145043)	+	AluSq2	SINE/Alu	4	313	(0)	1623393
2195	13.6	0.7	0.0	chr17	46112403	46112711	(37144730)	+	AluSx	SINE/Alu	1	311	(1)	1623394
2333	8.9	0.0	0.0	chr17	46116250	46116541	(37140900)	+	AluY	SINE/Alu	2	293	(18)	1623400
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
25	0.0	0.0	0.0	chr17	46198423	46198449	(37058992)	+	(A)n	Simple_repeat	1	27	(0)	1623558
2029	15.2	0.0	0.0	chr17	46198452	46198741	(37058700)	+	AluSx	SINE/Alu	3	292	(20)	1623559
270	29.6	1.4	1.0	chr17	46903681	46904446	(36352995)	+	(GGAT)n	Simple_repeat	1	768	(0)	1624959
90	4.1	1.0	0.0	chr17	46904447	46904547	(36352894)	+	(TGGA)n	Simple_repeat	1	102	(0)	1624960
270	29.6	1.4	1.0	chr17	46904548	46904640	(36352801)	+	(GGAT)n	Simple_repeat	1	94	(0)	1624961
483	31.4	7.2	0.6	chr17	48090399	48090568	(35166873)	+	L2b	LINE/L2	2540	2721	(698)	1627266
247	27.2	18.1	3.5	chr17	48090653	48090831	(35166610)	+	L2b	LINE/L2	3030	3235	(152)	1627266
485	34.3	14.9	1.9	chr17	48090810	48091228	(35166213)	C	L2a	LINE/L2	(0)	3426	2944	1627267
15	14.9	2.6	2.5	chr17	48101118	48101156	(35156285)	+	G-rich	Low_complexity	1	40	(0)	1627294
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
14	23.0	1.6	6.2	chr17	48107845	48107907	(35149534)	+	G-rich	Low_complexity	1	64	(0)	1627313
878	28.4	0.5	1.8	chr17	48236894	48237112	(35020329)	C	MIRb	SINE/MIR	(27)	241	26	1627514
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
14	16.1	2.1	6.2	chr17	48817324	48817370	(34440071)	+	(CAGCC)n	Simple_repeat	1	48	(0)	1628551
1610	15.9	4.4	1.5	chr17	48962088	48962351	(34295090)	C	AluJb	SINE/Alu	(30)	282	11	1628928
215	30.4	2.5	1.2	chr17	49260017	49260096	(33997345)	+	MIRc	SINE/MIR	122	202	(66)	1629559
12	27.1	0.0	2.2	chr17	50560616	50560661	(32696780)	+	(GGCGCGC)n	Simple_repeat	1	46	(0)	1632032
13	3.0	10.0	6.8	chr17	50560724	50560763	(32696678)	+	(GCTC)n	Simple_repeat	1	44	(0)	1632033
25	26.4	0.0	1.4	chr17	50560762	50560835	(32696606)	+	(CGG)n	Simple_repeat	1	74	(0)	1632034
2987	10.4	6.4	4.9	chr17	51434317	51434810	(31822631)	C	LTR10F	LTR/ERV1	(7)	504	3	1633781
4706	9.4	4.3	1.2	chr17	51434885	51435552	(31821889)	+	LTR8	LTR/ERV1	1	690	(1)	1633782
7576	23.6	8.7	7.0	chr17	53559094	53560700	(29696741)	+	L1MB8	LINE/L1	11	1688	(5179)	1636903
444	27.1	4.7	8.7	chr17	56701457	56701767	(26555674)	+	Charlie26a	DNA/hAT-Charlie	4	301	(24)	1641783
300	28.2	17.0	0.0	chr17	56915727	56915843	(26341598)	C	MIRb	SINE/MIR	(123)	145	5	1642234
192	26.2	2.3	0.0	chr17	56916023	56916064	(26341377)	C	L2b	LINE/L2	(5)	3370	3328	1642238
15	22.2	4.3	0.0	chr17	57256609	57256655	(26000786)	+	GA-rich	Low_complexity	1	49	(0)	1642980
21	16.2	2.0	2.0	chr17	58083200	58083251	(25174190)	+	(CCCTCC)n	Simple_repeat	1	52	(0)	1644417
181	21.1	0.0	5.0	chr17	58755400	58755439	(24502002)	C	OldhAT1	DNA/hAT-Ac	(1740)	1108	1071	1645697
16	0.0	0.0	0.0	chr17	59221420	59221436	(24036005)	+	(T)n	Simple_repeat	1	17	(0)	1646720
18	19.3	6.4	0.0	chr17	59964739	59964785	(23292656)	+	(GC)n	Simple_repeat	1	50	(0)	1648327
13	23.1	2.1	2.1	chr17	59964783	59964829	(23292612)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1648328
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
272	24.5	6.2	11.4	chr17	60526470	60526627	(22730814)	C	Charlie4z	DNA/hAT-Charlie	(24)	143	4	1649442
14	22.0	0.0	0.0	chr17	61133130	61133166	(22124275)	+	(AACCAA)n	Simple_repeat	1	37	(0)	1650552
663	29.8	9.2	1.3	chr17	61142099	61142329	(22115112)	C	MIRb	SINE/MIR	(16)	252	2	1650570
631	23.8	3.4	0.0	chr17	61142701	61142872	(22114569)	+	L1MC5	LINE/L1	9118	9295	(9)	1650571
31	31.4	2.0	0.0	chr17	61157498	61157599	(22099842)	+	(CT)n	Simple_repeat	1	104	(0)	1650594
272	35.8	5.8	4.0	chr17	61337916	61338116	(21919325)	+	L2b	LINE/L2	3169	3373	(2)	1650906
3860	15.7	7.9	5.7	chr17	62514879	62515927	(20741514)	C	L1MB3	LINE/L1	(39)	6144	5045	1653172
945	27.1	11.3	1.3	chr17	63775287	63775838	(19481603)	C	L2a	LINE/L2	(0)	3426	2805	1655336
219	23.7	4.8	3.3	chr17	63827987	63828047	(19429394)	C	MIRb	SINE/MIR	(200)	68	7	1655424
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
1609	17.0	5.8	0.0	chr17	65064074	65064349	(18193092)	C	AluJr	SINE/Alu	(19)	293	1	1657871
1859	14.8	0.7	1.7	chr17	65064871	65065167	(18192274)	C	AluJo	SINE/Alu	(18)	294	1	1657872
12	21.5	4.4	2.1	chr17	65561628	65561672	(17695769)	+	(CGCCG)n	Simple_repeat	1	47	(0)	1658890
29	2.9	0.0	2.7	chr17	65561686	65561722	(17695719)	+	(CGCCC)n	Simple_repeat	1	37	(0)	1658891
13	18.9	2.8	0.0	chr17	65561838	65561873	(17695568)	+	(CTCCTGC)n	Simple_repeat	1	37	(0)	1658892
363	32.8	5.1	2.9	chr17	66187077	66187286	(17070155)	+	L2	LINE/L2	2636	2850	(569)	1659792
1006	33.6	9.8	3.7	chr17	66187317	66188270	(17069171)	+	L2c	LINE/L2	1902	2937	(482)	1659789
1156	9.3	0.0	0.7	chr17	66237731	66237881	(17019560)	C	AluSz6	SINE/Alu	(161)	151	2	1659900
263	36.5	9.0	2.5	chr17	66238236	66238432	(17019009)	+	L3	LINE/CR1	979	1189	(2910)	1659901
30	30.3	3.4	2.6	chr17	66302124	66302272	(16955169)	+	GA-rich	Low_complexity	1	154	(0)	1660070
50	0.0	0.0	0.0	chr17	66302333	66302377	(16955064)	+	(GCC)n	Simple_repeat	1	45	(0)	1660071
2577	18.6	5.4	3.5	chr17	66509210	66509724	(16747717)	C	MLT2B4	LTR/ERVL	(29)	527	2	1660383
385	31.4	12.1	0.6	chr17	66509725	66509784	(16747657)	C	MLT1H2	LTR/ERVL-MaLR	(427)	62	1	1660382
334	27.4	1.2	0.0	chr17	66509821	66509904	(16747537)	+	L2b	LINE/L2	3291	3375	(0)	1660385
297	11.8	7.3	0.0	chr17	67247146	67247196	(16010245)	C	MADE1	DNA/TcMar-Mariner	(25)	55	1	1661592
237	32.5	11.6	3.2	chr17	67247331	67247581	(16009860)	+	L2a	LINE/L2	2662	2936	(483)	1661593
308	34.9	9.0	3.5	chr17	67599246	67599767	(15657674)	C	L2	LINE/L2	(954)	2465	1912	1662362
624	29.4	15.3	0.4	chr17	67599831	67600086	(15657355)	+	L1MEi	LINE/L1	29	329	(1883)	1662363
1505	22.7	11.4	5.0	chr17	67600197	67600743	(15656698)	+	L1MEi	LINE/L1	537	1132	(1080)	1662363
486	19.6	4.4	10.3	chr17	67711840	67711928	(15545513)	+	MER53	DNA/hAT	103	193	(0)	1662609
548	28.8	10.2	1.9	chr17	67711930	67712198	(15545243)	C	L2	LINE/L2	(514)	2905	2612	1662611
826	31.1	8.3	2.8	chr17	67712195	67712704	(15544737)	+	L2	LINE/L2	2283	2823	(596)	1662612
31	0.0	0.0	0.0	chr17	67712717	67712745	(15544696)	+	(T)n	Simple_repeat	1	29	(0)	1662613
2067	11.2	0.0	5.0	chr17	67712747	67713069	(15544372)	+	AluSg	SINE/Alu	1	307	(3)	1662614
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
2498	12.3	6.8	0.8	chr17	68689079	68689480	(14567961)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1664638
243	29.1	5.5	1.0	chr17	68689528	68689631	(14567810)	+	CR1-3_Croc	LINE/CR1	744	852	(2753)	1664639
386	33.7	10.6	4.3	chr17	68878006	68878427	(14379014)	C	L2a	LINE/L2	(1)	3425	2974	1664926
522	27.6	6.5	1.2	chr17	69326080	69326287	(13931154)	+	MIRc	SINE/MIR	21	232	(30)	1665540
14754	14.2	1.2	4.5	chr17	69398440	69398927	(13858514)	+	Tigger1	DNA/TcMar-Tigger	1	488	(1930)	1665695
2432	11.7	0.0	0.0	chr17	69398928	69399235	(13858206)	+	AluSq2	SINE/Alu	1	308	(5)	1665696
429	31.2	2.1	7.6	chr17	71172081	71172330	(12085111)	C	MER103C	DNA/hAT-Charlie	(57)	240	5	1668378
1045	12.9	22.4	0.4	chr17	71172505	71172730	(12084711)	C	AluSx	SINE/Alu	(12)	290	1	1668379
8630	24.3	8.3	5.6	chr17	71716736	71719255	(11538186)	+	L1ME3A	LINE/L1	146	2777	(4090)	1669207
474	34.7	8.4	2.5	chr17	73477395	73477640	(9779801)	+	MIRb	SINE/MIR	2	262	(6)	1672399
398	30.0	8.6	0.6	chr17	74425592	74425752	(8831689)	+	MIRc	SINE/MIR	90	264	(4)	1674149
2214	11.0	0.0	2.6	chr17	74426091	74426398	(8831043)	+	AluSx1	SINE/Alu	1	300	(12)	1674150
2092	15.0	0.0	0.0	chr17	75534480	75534779	(7722662)	C	AluJr	SINE/Alu	(11)	301	2	1676321
2287	11.5	0.0	0.0	chr17	76242899	76243202	(7014239)	C	AluSx1	SINE/Alu	(8)	304	1	1677645
13	23.3	6.0	0.0	chr17	76476844	76476893	(6780548)	+	(GCT)n	Simple_repeat	1	53	(0)	1678099
202	29.8	4.0	4.8	chr17	76557890	76558010	(6699431)	+	MIR	SINE/MIR	96	216	(52)	1678274
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
12	12.2	3.7	0.0	chr17	76698415	76698441	(6559000)	+	G-rich	Low_complexity	1	28	(0)	1678563
28	0.0	0.0	0.0	chr17	76698713	76698739	(6558702)	+	(T)n	Simple_repeat	1	27	(0)	1678564
14	6.5	2.6	7.7	chr17	76701961	76701998	(6555443)	+	A-rich	Low_complexity	1	39	(0)	1678571
815	28.2	2.9	2.1	chr17	76937011	76937289	(6320152)	C	L1MEg	LINE/L1	(5490)	752	472	1679062
140	20.7	1.2	2.1	chr17	76937302	76937631	(6319810)	+	(GGAT)n	Simple_repeat	1	334	(0)	1679066
424	32.9	4.3	1.9	chr17	76937756	76937913	(6319528)	C	MIR3	SINE/MIR	(17)	191	30	1679067
2991	25.7	6.9	3.8	chr17	77294441	77295263	(5962178)	C	Arthur1B	DNA/hAT-Tip100	(343)	882	46	1679822
727	21.7	6.5	14.3	chr17	77574816	77574992	(5682449)	C	MER20	DNA/hAT-Charlie	(2)	217	70	1680259
894	25.7	3.6	1.5	chr17	77651254	77651522	(5605919)	C	L1ME1	LINE/L1	(2)	6177	5903	1680397
3565	21.7	4.3	5.0	chr17	77651529	77652455	(5604986)	C	MER21C	LTR/ERVL	(17)	921	1	1680398
117	38.1	0.7	0.7	chr17	77861072	77861115	(5396326)	+	(ATGG)n	Simple_repeat	1	44	(0)	1680767
72	5.9	1.1	0.0	chr17	77861116	77861205	(5396236)	+	(TGGA)n	Simple_repeat	1	91	(0)	1680768
117	38.1	0.7	0.7	chr17	77861206	77861636	(5395805)	+	(ATGG)n	Simple_repeat	1	432	(0)	1680769
571	24.4	11.3	0.0	chr17	77971373	77971569	(5285872)	+	L2c	LINE/L2	2257	2478	(941)	1680976
315	20.8	8.9	0.0	chr17	77971593	77971664	(5285777)	+	L1M5	LINE/L1	3531	3609	(2537)	1680977
367	24.3	1.0	0.0	chr17	77971666	77971768	(5285673)	+	L2c	LINE/L2	2485	2588	(831)	1680976
2804	22.5	4.8	3.3	chr17	77971784	77972230	(5285211)	+	L1M4	LINE/L1	2859	3301	(2845)	1680978
376	31.0	10.1	0.9	chr17	78123027	78123279	(5134162)	+	L2b	LINE/L2	3007	3305	(82)	1681235
216	29.0	0.5	1.6	chr17	78123330	78123954	(5133487)	+	(GATG)n	Simple_repeat	1	628	(0)	1681236
2196	8.6	4.2	3.0	chr17	78187686	78187989	(5069452)	+	AluSg	SINE/Alu	2	309	(1)	1681348
436	23.5	0.1	2.1	chr17	78540335	78541374	(4716067)	+	(GGTG)n	Simple_repeat	1	1041	(0)	1682002
40	4.5	0.0	0.0	chr17	78541378	78541423	(4716018)	+	(TGGA)n	Simple_repeat	1	46	(0)	1682003
218	33.9	0.8	4.5	chr17	78541435	78541567	(4715874)	C	L2c	LINE/L2	(40)	3347	3220	1682004
13	8.4	0.0	3.7	chr17	78590269	78590295	(4667146)	+	(CCCCA)n	Simple_repeat	1	27	(0)	1682080
561	22.9	15.1	0.0	chr17	78590306	78590462	(4666979)	+	MER5A	DNA/hAT-Charlie	5	189	(0)	1682081
18340	13.7	2.6	2.8	chr17	79012266	79015576	(4241865)	+	MER41-int	LTR/ERV1	1	4655	(1291)	1682845
333	30.0	0.7	1.4	chr17	79498374	79498597	(3758844)	+	(CATC)n	Simple_repeat	1	217	(0)	1683500
30	8.4	3.0	2.9	chr17	79498598	79498664	(3758777)	+	(CCAT)n	Simple_repeat	1	69	(0)	1683501
333	28.5	0.7	1.3	chr17	79498665	79499490	(3757951)	+	(CATC)n	Simple_repeat	1	820	(0)	1683502
85	4.2	6.5	0.0	chr17	79611091	79611213	(3646228)	+	(CT)n	Simple_repeat	1	131	(0)	1683649
751	17.3	3.9	0.0	chr17	79722733	79722882	(3534559)	+	L1MC3	LINE/L1	6686	6841	(944)	1683813
26	2.2	0.0	10.5	chr17	79722888	79722944	(3534497)	+	(ACATGCAC)n	Simple_repeat	1	57	(0)	1683814
35	37.4	0.0	0.0	chr17	79722953	79723086	(3534355)	+	(CACA)n	Simple_repeat	1	134	(0)	1683815
2309	23.1	5.0	5.8	chr17	79723093	79723544	(3533897)	+	L1MC3	LINE/L1	6865	7322	(463)	1683813
2209	9.4	4.5	0.0	chr17	79723545	79723841	(3533600)	C	AluSq2	SINE/Alu	(2)	311	1	1683816
19	12.1	3.2	7.7	chr17	79838874	79838936	(3418505)	+	(CCCCACC)n	Simple_repeat	1	65	(0)	1684010
20	26.3	2.0	5.0	chr17	79838906	79839004	(3418437)	+	(CCCCGCG)n	Simple_repeat	1	101	(0)	1684011
13	15.6	2.0	7.8	chr17	79839129	79839178	(3418263)	+	(CCGCCGG)n	Simple_repeat	1	51	(0)	1684012
15	17.1	6.5	0.0	chr17	79839383	79839428	(3418013)	+	(CCGGCTC)n	Simple_repeat	1	49	(0)	1684013
210	34.7	16.6	2.0	chr17	79932247	79932640	(3324801)	C	L3b	LINE/CR1	(229)	5003	4541	1684193
1289	18.8	3.9	1.8	chr17	80495309	80495585	(2761856)	C	L1MB3	LINE/L1	(3)	6180	5898	1685096
657	20.7	0.0	0.0	chr17	80495628	80495762	(2761679)	C	L1MB3	LINE/L1	(421)	5750	5616	1685096
266	26.3	1.8	10.8	chr17	80495763	80495911	(2761530)	C	MIRb	SINE/MIR	(114)	154	12	1685097
765	17.2	1.9	1.8	chr17	80503152	80503311	(2754130)	+	THE1C	LTR/ERVL-MaLR	1	167	(261)	1685109
291	23.0	2.2	5.4	chr17	81291512	81291603	(1965838)	+	L1ME3A	LINE/L1	5425	5513	(666)	1686067
1119	21.3	0.5	0.3	chr17	82147079	82149352	(1108089)	+	(TGGA)n	Simple_repeat	1	2286	(0)	1687231
2242	12.0	0.0	0.0	chr17	82295148	82295447	(961994)	C	AluSq2	SINE/Alu	(13)	300	1	1687442
1114	18.4	6.1	3.3	chr17	82295448	82295642	(961799)	C	L1MA8	LINE/L1	(310)	5981	5775	1687443
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
19	21.2	0.0	2.0	chr17	83051904	83051954	(205487)	+	(GGCGG)n	Simple_repeat	1	51	(0)	1688528
330	22.1	2.9	0.0	chr17	83241110	83241177	(16264)	+	MLT2B3	LTR/ERVL	3	72	(482)	1688722
322	20.6	2.9	0.0	chr17	83241203	83241270	(16171)	+	MLT2B3	LTR/ERVL	3	72	(482)	1688722
306	17.5	6.0	0.0	chr17	83241298	83241360	(16081)	+	MLT2B3	LTR/ERVL	6	72	(482)	1688722
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2159	12.1	0.0	0.3	chr18	6688183	6688464	(73684821)	+	AluSz	SINE/Alu	1	281	(31)	1698913
38	0.0	0.0	0.0	chr18	6688465	6688499	(73684786)	+	(TGGAA)n	Simple_repeat	1	35	(0)	1698914
5692	15.2	3.0	1.9	chr18	6688500	6689661	(73683624)	+	L1MC1	LINE/L1	5165	6332	(1)	1698912
473	29.4	5.8	5.3	chr18	6919867	6920053	(73453232)	+	L2	LINE/L2	2429	2616	(803)	1699240
93	15.4	0.9	5.7	chr18	6920265	6920489	(73452796)	+	(GGTGGT)n	Simple_repeat	1	227	(0)	1699241
13	6.6	5.6	5.3	chr18	8609193	8609228	(71764057)	+	A-rich	Low_complexity	1	38	(0)	1701666
3444	9.6	2.5	5.3	chr18	8882794	8883319	(71489966)	C	LTR10F	LTR/ERV1	(0)	511	1	1702053
1568	16.2	2.6	2.6	chr18	8883381	8883652	(71489633)	C	AluJr	SINE/Alu	(4)	308	37	1702054
1733	11.4	3.8	13.5	chr18	9057779	9058162	(71315123)	+	LTR45B	LTR/ERV1	11	355	(134)	1702354
806	14.5	6.8	1.4	chr18	9058153	9058292	(71314993)	+	LTR72B	LTR/ERV1	353	500	(0)	1702355
7322	22.1	3.3	2.2	chr18	9680715	9682523	(70690762)	C	L1M4b	LINE/L1	(5256)	1611	15	1703483
1759	10.6	0.0	0.0	chr18	11806960	11807186	(68566099)	+	AluSx	SINE/Alu	84	310	(2)	1706361
350	11.3	7.5	0.0	chr18	11807190	11807251	(68566034)	C	L1PA13	LINE/L1	(300)	5863	5797	1706359
570	26.6	8.8	0.9	chr18	11807252	11807482	(68565803)	C	L2	LINE/L2	(566)	2853	2603	1706362
281	27.1	5.0	3.2	chr18	11807541	11807696	(68565589)	C	L2-1_AMi	LINE/L2	(694)	541	383	1706363
526	27.4	16.0	0.0	chr18	11807730	11807981	(68565304)	C	L2	LINE/L2	(1125)	2294	1995	1706362
14	4.9	0.0	0.0	chr18	12861663	12861683	(67511602)	+	(AAC)n	Simple_repeat	1	21	(0)	1708241
343	29.5	14.6	1.8	chr18	12971693	12971972	(67401313)	C	L2c	LINE/L2	(125)	3262	2941	1708484
266	27.7	7.5	7.8	chr18	12972084	12972377	(67400908)	C	L2c	LINE/L2	(649)	2770	2478	1708484
198	30.9	7.8	2.1	chr18	21109215	21109310	(59263975)	+	L2c	LINE/L2	3268	3369	(18)	1711923
1138	29.3	5.2	3.3	chr18	21191505	21191841	(59181444)	+	ERV3-16A3_I-int	LTR/ERVL	201	568	(4428)	1712083
12	25.1	0.0	4.3	chr18	21242856	21242901	(59130384)	+	G-rich	Low_complexity	1	46	(0)	1712210
2186	6.9	0.0	0.7	chr18	21611831	21612107	(58761178)	C	AluSq	SINE/Alu	(5)	308	34	1712919
545	16.1	0.0	0.0	chr18	22231928	22232858	(58140427)	+	(CCAT)n	Simple_repeat	1	931	(0)	1714198
280	26.5	5.3	4.1	chr18	22391810	22391978	(57981307)	+	L1ME3G	LINE/L1	735	905	(19)	1714485
2291	18.8	8.2	3.3	chr18	22672680	22672724	(57700561)	C	MLT2B1	LTR/ERVL	(0)	520	476	1714858
2880	13.7	0.5	4.6	chr18	22672725	22673177	(57700108)	+	Tigger2a	DNA/TcMar-Tigger	1	434	(0)	1714859
16	0.0	0.0	0.0	chr18	23719670	23719686	(56653599)	+	(T)n	Simple_repeat	1	17	(0)	1716755
360	24.2	0.0	14.9	chr18	23719955	23720095	(56653190)	+	L2a	LINE/L2	3304	3423	(3)	1716756
383	28.5	12.8	1.5	chr18	24530360	24530561	(55842724)	+	MIRb	SINE/MIR	33	262	(0)	1718119
5184	24.4	9.7	4.8	chr18	25021333	25023185	(55350100)	+	L1M4a1	LINE/L1	792	2571	(8)	1718830
2138	12.9	6.6	1.2	chr18	25502955	25503353	(54869932)	+	L1MA4	LINE/L1	5868	6289	(11)	1719421
1287	27.7	7.6	4.2	chr18	25503363	25503935	(54869350)	C	MLT2F	LTR/ERVL	(69)	594	1	1719422
45	6.0	0.0	0.0	chr18	25504018	25504069	(54869216)	+	(TC)n	Simple_repeat	1	52	(0)	1719423
2537	0.7	0.0	6.3	chr18	26261173	26261499	(54111786)	C	AluYa5	SINE/Alu	(0)	311	1	1720615
6439	21.5	11.3	2.8	chr18	26261500	26262477	(54110808)	C	L1M4b	LINE/L1	(5694)	1173	119	1720606
6351	12.1	2.2	3.0	chr18	26430157	26430691	(53942594)	C	L1MA3	LINE/L1	(0)	6305	5781	1720903
237	22.5	0.3	0.0	chr18	28314735	28314795	(52058490)	+	MLT1J	LTR/ERVL-MaLR	3	64	(546)	1723576
249	24.3	4.6	1.9	chr18	28314859	28314963	(52058322)	+	MLT1J	LTR/ERVL-MaLR	79	186	(326)	1723576
946	29.0	6.6	3.4	chr18	28315024	28315434	(52057851)	+	LTR101_Mam	LTR/ERVL	122	546	(283)	1723577
3354	10.1	0.8	5.6	chr18	30141375	30141911	(50231374)	C	LTR10F	LTR/ERV1	(0)	511	1	1725939
8398	15.1	3.1	2.0	chr18	30141912	30142924	(50230361)	C	MER51-int	LTR/ERV1	(6772)	1044	1	1725935
969	28.7	21.9	2.0	chr18	31226912	31227662	(49145623)	+	L2	LINE/L2	2066	3008	(411)	1727401
1087	6.7	0.0	4.0	chr18	32017986	32018135	(48355150)	C	AluSz	SINE/Alu	(167)	145	2	1728648
2254	16.5	5.4	1.0	chr18	32203621	32204029	(48169256)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1729044
13	13.2	0.0	0.0	chr18	32321156	32321180	(48052105)	+	(AATA)n	Simple_repeat	1	25	(0)	1729209
258	32.9	17.7	2.3	chr18	32321411	32321843	(48051442)	+	L2b	LINE/L2	2253	2766	(653)	1729210
18	25.0	0.0	3.3	chr18	32470449	32470508	(47902777)	+	(CCG)n	Simple_repeat	1	60	(0)	1729399
186	20.8	3.6	7.0	chr18	32763870	32763926	(47609359)	C	L2c	LINE/L2	(87)	3300	3246	1729856
398	31.4	7.5	4.4	chr18	33210115	33210384	(47162901)	C	L2a	LINE/L2	(0)	3426	3148	1730430
2188	15.3	9.4	0.0	chr18	33466434	33466818	(46906467)	+	MSTA	LTR/ERVL-MaLR	1	425	(3)	1730777
17	32.4	2.9	0.0	chr18	33578113	33578181	(46795104)	+	(GC)n	Simple_repeat	1	71	(0)	1730902
46	24.3	2.0	2.6	chr18	33578269	33578458	(46794827)	+	(CCGCCC)n	Simple_repeat	1	188	(0)	1730903
9754	14.9	2.5	0.9	chr18	33613929	33615357	(46757928)	C	Tigger1	DNA/TcMar-Tigger	(200)	2218	765	1730947
676	24.3	1.7	4.0	chr18	34978814	34978989	(45394296)	+	MER5B	DNA/hAT-Charlie	1	172	(6)	1732685
1950	21.4	9.8	6.8	chr18	35648915	35649835	(44723450)	C	L1ME1	LINE/L1	(301)	5830	4884	1733634
26823	5.2	0.1	0.1	chr18	35897481	35903637	(44469648)	+	L1PA4	LINE/L1	1	6154	(1)	1733947
1892	10.3	8.0	2.2	chr18	36067891	36068207	(44305078)	+	L1MA2	LINE/L1	5968	6304	(0)	1734239
31	7.5	0.0	0.0	chr18	44836481	44836523	(35536762)	+	(CTCCA)n	Simple_repeat	1	43	(0)	1746028
205	18.6	0.3	0.0	chr18	46546273	46546655	(33826630)	+	(CATTC)n	Satellite	1	384	(0)	1748842
15	17.0	9.4	0.0	chr18	46546806	46546858	(33826427)	+	G-rich	Low_complexity	1	58	(0)	1748843
29	26.6	2.6	2.6	chr18	48161692	48161804	(32211481)	+	(CCCGC)n	Simple_repeat	1	116	(0)	1751434
13	11.6	0.0	6.2	chr18	48161947	48161978	(32211307)	+	(GGCCC)n	Simple_repeat	1	32	(0)	1751435
501	19.0	0.5	0.6	chr18	48602775	48603744	(31769541)	+	(ATGG)n	Simple_repeat	1	975	(0)	1752182
189	31.5	17.9	0.0	chr18	48729553	48729644	(31643641)	C	MIR3	SINE/MIR	(76)	132	21	1752362
441	30.0	7.9	0.0	chr18	48730039	48730178	(31643107)	C	MER3	DNA/hAT-Charlie	(0)	209	58	1752363
2264	9.0	0.4	3.5	chr18	50967071	50967358	(29405927)	C	AluSz6	SINE/Alu	(33)	279	1	1756117
8547	13.3	0.4	1.3	chr18	51003702	51004692	(29368593)	+	HERVL-int	LTR/ERVL	1014	1996	(3658)	1756192
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
34	0.0	0.0	0.0	chr18	55587338	55587374	(24785911)	+	(A)n	Simple_repeat	1	37	(0)	1762867
22	15.9	2.4	0.0	chr18	55587583	55587624	(24785661)	+	(CA)n	Simple_repeat	1	43	(0)	1762868
484	30.9	4.0	3.5	chr18	57235186	57235386	(23137899)	C	MIRb	SINE/MIR	(3)	265	64	1765254
229	30.0	9.8	2.6	chr18	58419440	58419552	(21953733)	+	L2b	LINE/L2	3254	3375	(0)	1767211
470	15.4	0.2	0.4	chr18	58419553	58420358	(21952927)	+	(GGAT)n	Simple_repeat	1	808	(0)	1767212
226	5.1	23.5	0.0	chr18	59309062	59309100	(21064185)	C	MER66B	LTR/ERV1	(141)	345	295	1768762
825	25.4	11.4	0.3	chr18	59628832	59629166	(20744119)	+	L2a	LINE/L2	2548	2924	(495)	1769232
266	35.0	9.3	5.4	chr18	61974725	61974929	(18398356)	+	L2c	LINE/L2	3174	3387	(0)	1772739
16	21.8	0.0	4.2	chr18	63218408	63218455	(17154830)	+	(TCTT)n	Simple_repeat	1	48	(0)	1774723
248	34.3	7.1	0.0	chr18	69553450	69553554	(10819731)	+	MIRb	SINE/MIR	5	117	(151)	1783344
559	29.8	5.6	4.1	chr18	69838496	69838740	(10534545)	C	MIR	SINE/MIR	(2)	260	12	1783743
28	30.3	0.3	11.0	chr18	69839094	69839427	(10533858)	+	(CCTCC)n	Simple_repeat	1	335	(0)	1783744
285	28.0	2.6	0.0	chr18	74497016	74497090	(5876195)	+	MIRc	SINE/MIR	79	155	(113)	1789972
38	0.0	0.0	0.0	chr18	74551362	74551394	(5821891)	+	(AC)n	Simple_repeat	1	33	(0)	1790032
18	4.7	0.0	0.0	chr18	74551910	74551931	(5821354)	+	(A)n	Simple_repeat	1	22	(0)	1790033
222	25.1	1.1	1.0	chr18	76605315	76605886	(3767399)	+	(CATC)n	Simple_repeat	1	578	(0)	1792342
635	10.0	3.5	3.5	chr18	78957064	78957177	(1416108)	+	THE1D	LTR/ERVL-MaLR	1	114	(267)	1795026
1636	12.5	5.7	1.3	chr18	78957558	78957857	(1415428)	+	THE1D	LTR/ERVL-MaLR	68	381	(0)	1795026
375	14.5	3.8	0.0	chr18	79895096	79895171	(478114)	C	L1M4b	LINE/L1	(3704)	3163	3085	1795880
226	13.4	15.2	0.0	chr18	79895163	79895229	(478056)	C	L1M4b	LINE/L1	(3704)	3163	3085	1795880
371	15.6	3.6	0.2	chr18	79895259	79895355	(477930)	C	L1M4b	LINE/L1	(3702)	3165	3085	1795881
267	13.3	15.7	0.0	chr18	79895332	79895406	(477879)	C	L1M4b	LINE/L1	(3686)	3181	3093	1795879
270	14.3	12.5	0.0	chr18	79895408	79895470	(477815)	C	L1M4b	LINE/L1	(3709)	3158	3087	1795879
312	14.1	10.1	0.0	chr18	79895520	79895590	(477695)	C	L1M4b	LINE/L1	(3704)	3163	3085	1795879
359	17.8	7.2	0.0	chr18	79895621	79895710	(477575)	C	L1M4b	LINE/L1	(3686)	3181	3085	1795879
2366	7.3	2.3	0.0	chr19	267692	267992	(58349624)	+	AluSp	SINE/Alu	3	310	(3)	1796659
2456	7.0	0.0	2.9	chr19	396067	396381	(58221235)	C	AluY	SINE/Alu	(0)	311	6	1796860
1111	19.1	0.5	0.0	chr19	442151	444212	(58173404)	+	(TGGA)n	Simple_repeat	1	2072	(0)	1796915
186	35.5	13.9	2.4	chr19	464531	464784	(58152832)	+	L2b	LINE/L2	3028	3315	(60)	1796961
54	0.0	3.3	1.6	chr19	464873	464932	(58152684)	+	(ATGG)n	Simple_repeat	1	62	(0)	1796962
1003	24.5	1.3	0.1	chr19	464958	467296	(58150320)	+	(GGAT)n	Simple_repeat	1	2369	(0)	1796963
1115	24.5	8.0	0.3	chr19	481733	481770	(58135846)	C	MER33	DNA/hAT-Charlie	(0)	324	287	1796993
1974	17.4	0.0	0.7	chr19	481771	482075	(58135541)	C	AluJr	SINE/Alu	(9)	303	1	1796994
32	0.0	0.0	0.0	chr19	544707	544736	(58072880)	+	(TCCC)n	Simple_repeat	1	30	(0)	1797110
126	29.1	3.2	0.6	chr19	544737	545138	(58072478)	+	(ATCC)n	Simple_repeat	4	415	(0)	1797111
246	35.7	2.1	0.9	chr19	816045	817070	(57800546)	+	(CACC)n	Simple_repeat	1	1048	(0)	1797650
535	21.8	0.7	0.4	chr19	1549368	1550492	(57067124)	+	(ATCC)n	Simple_repeat	1	1133	(0)	1799001
2116	7.8	3.9	0.0	chr19	1703957	1704254	(56913362)	+	AluY	SINE/Alu	1	311	(0)	1799341
13	10.7	0.0	8.3	chr19	1704273	1704308	(56913308)	+	A-rich	Low_complexity	1	36	(0)	1799342
511	23.9	1.2	0.6	chr19	1704307	1704722	(56912894)	+	(ATGG)n	Simple_repeat	1	423	(0)	1799343
1634	17.4	13.7	6.5	chr19	1705108	1705416	(56912200)	C	MSTB1	LTR/ERVL-MaLR	(72)	360	1	1799344
511	23.9	1.2	0.6	chr19	1705417	1706210	(56911406)	+	(ATGG)n	Simple_repeat	4	798	(0)	1799346
509	28.3	1.8	1.5	chr19	1716744	1718327	(56899289)	+	(ATGG)n	Simple_repeat	1	1612	(0)	1799376
160	34.2	0.9	1.3	chr19	2156306	2156543	(56461073)	+	(ATCC)n	Simple_repeat	1	239	(0)	1800243
2365	9.5	0.0	0.0	chr19	2156569	2156872	(56460744)	+	AluSc5	SINE/Alu	1	304	(5)	1800244
280	19.4	4.6	0.0	chr19	2165690	2165751	(56451865)	C	HY1	scRNA	(54)	65	1	1800277
1004	9.4	0.0	14.1	chr19	2256943	2257086	(56360530)	C	AluSz	SINE/Alu	(175)	137	9	1800400
2296	10.4	0.0	0.0	chr19	2257378	2257674	(56359942)	+	AluSx1	SINE/Alu	1	297	(15)	1800402
587	26.6	0.6	0.3	chr19	2356751	2358184	(56259432)	+	(ATCC)n	Simple_repeat	1	1442	(0)	1800597
1717	16.0	6.3	0.4	chr19	2385587	2385867	(56231749)	+	AluJb	SINE/Alu	1	299	(13)	1800675
2539	7.4	0.0	0.0	chr19	2531871	2532179	(56085437)	+	AluYk2	SINE/Alu	2	310	(1)	1801029
2397	25.0	4.0	11.2	chr19	2532180	2533596	(56084020)	+	L1ME2z	LINE/L1	807	1312	(4930)	1801024
308	16.9	0.4	0.0	chr19	2590427	2590966	(56026650)	+	(ATCC)n	Simple_repeat	1	542	(0)	1801175
1926	15.4	1.0	5.2	chr19	2661375	2661699	(55955917)	+	AluSx1	SINE/Alu	1	311	(1)	1801371
16	14.5	0.0	0.0	chr19	2661700	2661730	(55955886)	+	(GGAA)n	Simple_repeat	1	31	(0)	1801372
538	17.6	5.3	0.0	chr19	2661749	2661873	(55955743)	+	MLT1F1	LTR/ERVL-MaLR	288	419	(150)	1801367
3016	20.0	10.0	3.3	chr19	2661916	2661977	(55955639)	C	MER21B	LTR/ERVL	(3)	865	812	1801373
12	19.7	6.2	2.0	chr19	2820169	2820216	(55797400)	+	G-rich	Low_complexity	1	51	(0)	1801709
369	29.6	2.3	0.0	chr19	2962110	2962234	(55655382)	+	L1ME1	LINE/L1	6039	6166	(13)	1802025
2366	11.1	0.0	0.0	chr19	2962529	2962835	(55654781)	C	AluSx1	SINE/Alu	(5)	307	1	1802026
276	22.6	1.4	0.9	chr19	3036000	3036071	(55581545)	C	MIR1_Amn	SINE/MIR	(99)	169	103	1802226
688	22.5	0.9	0.7	chr19	3153278	3154797	(55462819)	+	(GATG)n	Simple_repeat	1	1534	(0)	1802521
306	24.3	1.4	1.0	chr19	3231268	3232045	(55385571)	+	(GGAT)n	Simple_repeat	1	789	(0)	1802690
1449	27.4	6.4	1.7	chr19	3234672	3235487	(55382129)	+	L2a	LINE/L2	2537	3389	(37)	1802701
219	7.6	2.4	2.4	chr19	3235488	3235860	(55381756)	+	(GGAT)n	Simple_repeat	1	382	(0)	1802702
204	37.1	5.3	5.9	chr19	3235861	3235889	(55381727)	+	L2a	LINE/L2	3339	3369	(6)	1802701
12	26.6	0.0	0.0	chr19	3235897	3235933	(55381683)	+	(GTGG)n	Simple_repeat	1	37	(0)	1802703
14	14.3	0.0	8.7	chr19	3275215	3275260	(55342356)	+	(GCCCA)n	Simple_repeat	1	46	(0)	1802809
28	3.3	0.0	0.0	chr19	3275439	3275469	(55342147)	+	(CAGA)n	Simple_repeat	1	31	(0)	1802810
413	22.2	1.0	0.8	chr19	3322257	3323187	(55294429)	+	(TGGA)n	Simple_repeat	1	940	(0)	1802928
616	32.7	2.8	1.0	chr19	3475409	3476488	(55141128)	+	(ATGG)n	Simple_repeat	1	1094	(0)	1803382
339	21.6	2.4	0.7	chr19	3776208	3776999	(54840617)	+	(TGGA)n	Simple_repeat	1	811	(0)	1804005
533	31.8	6.1	1.8	chr19	3777066	3777283	(54840333)	+	MIRb	SINE/MIR	4	231	(37)	1804006
1967	21.1	4.8	5.1	chr19	3898485	3898676	(54718940)	C	L1MB5	LINE/L1	(240)	5934	5747	1804282
2179	13.9	0.0	0.0	chr19	3898677	3898979	(54718637)	C	AluSc	SINE/Alu	(6)	303	1	1804284
1967	21.1	4.8	5.1	chr19	3898980	3899082	(54718534)	C	L1MB5	LINE/L1	(428)	5746	5646	1804282
12	12.5	7.9	2.4	chr19	3899197	3899234	(54718382)	+	A-rich	Low_complexity	1	41	(0)	1804285
2387	9.4	0.0	0.3	chr19	3899307	3899614	(54718002)	C	AluSx	SINE/Alu	(5)	307	1	1804286
689	28.2	14.5	2.0	chr19	3923094	3923393	(54694223)	+	L1MEd	LINE/L1	517	860	(6226)	1804354
431	21.8	0.7	0.3	chr19	3923404	3924316	(54693300)	+	(ATGG)n	Simple_repeat	1	919	(0)	1804355
626	29.4	8.5	11.8	chr19	4183936	4184083	(54433533)	C	L2b	LINE/L2	(276)	3099	2971	1804968
203	25.1	0.6	0.6	chr19	4184754	4185247	(54432369)	+	(TGGA)n	Simple_repeat	1	497	(0)	1804970
15	14.9	5.4	0.0	chr19	4185290	4185326	(54432290)	+	G-rich	Low_complexity	1	39	(0)	1804971
525	21.0	2.7	0.2	chr19	4334372	4335564	(54282052)	+	(CCAT)n	Simple_repeat	1	1225	(0)	1805380
391	26.9	1.2	1.4	chr19	4553042	4554135	(54063481)	+	(TGGA)n	Simple_repeat	1	1107	(0)	1805849
615	24.6	1.7	0.6	chr19	4602066	4602121	(54015495)	+	(GGAT)n	Simple_repeat	4	60	(0)	1805976
34	7.9	4.3	1.4	chr19	4602122	4602190	(54015426)	+	(ATGG)n	Simple_repeat	1	72	(0)	1805977
615	24.6	1.7	0.6	chr19	4602191	4603634	(54013982)	+	(GGAT)n	Simple_repeat	1	1459	(0)	1805978
1155	13.9	1.2	0.0	chr19	5326540	5326705	(53290911)	+	FRAM	SINE/Alu	1	168	(8)	1807673
60	21.7	2.8	3.2	chr19	5326707	5326886	(53290730)	+	GA-rich	Low_complexity	1	185	(0)	1807674
19	16.0	4.2	6.7	chr19	5340732	5340803	(53276813)	+	(CGCGCGG)n	Simple_repeat	1	75	(0)	1807705
18	27.3	0.0	3.1	chr19	5340835	5340899	(53276717)	+	(CCG)n	Simple_repeat	1	65	(0)	1807706
205	28.3	4.0	1.2	chr19	5367334	5368106	(53249510)	+	(GGAT)n	Simple_repeat	1	804	(0)	1807782
109	9.7	2.2	1.6	chr19	5388583	5388764	(53228852)	+	(GGGGA)n	Simple_repeat	1	186	(0)	1807851
219	39.1	3.8	2.6	chr19	5388779	5388933	(53228683)	C	L2c	LINE/L2	(614)	2805	2649	1807847
2212	10.9	2.3	1.0	chr19	5389186	5389487	(53228129)	+	AluSz6	SINE/Alu	7	312	(0)	1807852
195	19.2	2.2	0.2	chr19	5423644	5424054	(53193562)	+	(TCCA)n	Simple_repeat	1	420	(0)	1807945
384	35.9	0.0	0.0	chr19	5424055	5424182	(53193434)	C	L2b	LINE/L2	(0)	3375	3248	1807946
863	26.6	10.4	2.5	chr19	5435352	5436109	(53181507)	+	L2b	LINE/L2	2592	3387	(0)	1807979
423	24.6	2.6	0.8	chr19	5524669	5525656	(53091960)	+	(TCCA)n	Simple_repeat	1	1005	(0)	1808241
44	2.4	0.0	0.0	chr19	5525657	5525698	(53091918)	+	(AC)n	Simple_repeat	1	42	(0)	1808242
423	24.6	2.6	0.8	chr19	5525699	5525852	(53091764)	+	(TCCA)n	Simple_repeat	2	160	(0)	1808243
14	27.1	0.0	0.0	chr19	5525827	5525870	(53091746)	+	(CACA)n	Simple_repeat	1	44	(0)	1808244
350	36.1	10.9	1.0	chr19	5525874	5526178	(53091438)	C	L2b	LINE/L2	(0)	3375	3037	1808245
1869	15.7	0.3	2.3	chr19	5534686	5534985	(53082631)	C	AluJr	SINE/Alu	(18)	294	1	1808284
292	24.1	1.4	2.2	chr19	5673408	5674184	(52943432)	+	(CATC)n	Simple_repeat	1	788	(0)	1808563
216	22.3	0.4	0.6	chr19	5681430	5681899	(52935717)	+	(CCAT)n	Simple_repeat	1	472	(0)	1808577
365	38.8	3.4	8.2	chr19	5682026	5682732	(52934884)	C	L2	LINE/L2	(391)	3028	2357	1808578
1628	15.3	3.7	13.2	chr19	5762364	5762535	(52855081)	C	THE1D	LTR/ERVL-MaLR	(214)	167	1	1808782
314	20.3	0.0	1.4	chr19	5762536	5763152	(52854464)	+	(TGGA)n	Simple_repeat	3	612	(0)	1808785
537	14.0	0.0	4.0	chr19	5763362	5763461	(52854155)	+	AluSz6	SINE/Alu	216	311	(1)	1808786
204	34.3	6.2	1.9	chr19	5892844	5892950	(52724666)	C	MIR	SINE/MIR	(113)	149	38	1809085
629	29.8	7.7	1.5	chr19	5960043	5960311	(52657305)	+	MLT1K	LTR/ERVL-MaLR	305	591	(4)	1809175
512	28.4	8.9	0.5	chr19	5960410	5960593	(52657023)	+	L2a	LINE/L2	3217	3417	(9)	1809176
1505	27.3	12.5	10.2	chr19	6068278	6069986	(52547630)	C	L2a	LINE/L2	(0)	3426	1688	1809355
262	1.2	0.0	3.2	chr19	6069987	6070265	(52547351)	+	(GGATG)n	Simple_repeat	1	279	(0)	1809356
1505	27.9	13.9	11.4	chr19	6070266	6070345	(52547271)	C	L2a	LINE/L2	(1732)	1687	1590	1809355
186	27.3	12.5	3.8	chr19	6209409	6209488	(52408128)	C	LFSINE_Vert	SINE/tRNA	(216)	243	156	1809702
188	21.4	0.5	0.5	chr19	6209682	6210085	(52407531)	+	(TCCA)n	Simple_repeat	1	406	(0)	1809703
1650	17.7	1.4	0.4	chr19	6539444	6539720	(52077896)	+	AluJo	SINE/Alu	11	290	(22)	1810519
498	16.2	6.9	20.4	chr19	6539721	6539789	(52077827)	+	MLT1C	LTR/ERVL-MaLR	181	234	(233)	1810518
1001	14.1	8.2	0.0	chr19	6539796	6539951	(52077665)	+	AluSz	SINE/Alu	1	170	(142)	1810520
873	20.3	0.6	2.6	chr19	6539980	6540179	(52077437)	+	MLT1C	LTR/ERVL-MaLR	212	463	(4)	1810518
539	17.7	0.4	0.3	chr19	6775986	6776750	(51840866)	+	(ATCC)n	Simple_repeat	1	766	(0)	1811115
2228	9.9	1.6	0.3	chr19	6776751	6777053	(51840563)	C	AluSg7	SINE/Alu	(2)	307	1	1811116
274	19.7	1.4	0.7	chr19	7228804	7229377	(51388239)	+	(GGAT)n	Simple_repeat	1	582	(0)	1812336
359	32.0	3.9	3.9	chr19	7229415	7229596	(51388020)	+	L1MC	LINE/L1	4412	4593	(1553)	1812337
249	19.6	0.0	0.0	chr19	7246942	7246987	(51370629)	+	MLT1H	LTR/ERVL-MaLR	504	549	(0)	1812394
14008	16.0	2.0	6.3	chr19	7799205	7800625	(50816991)	C	HERVKC4-int	LTR/ERVK	(3838)	1424	96	1813741
2167	14.8	0.0	5.3	chr19	7815456	7815854	(50801762)	C	LTR1	LTR/ERV1	(0)	783	406	1813791
1024	12.5	4.2	0.6	chr19	7815972	7816131	(50801485)	+	FRAM	SINE/Alu	1	166	(10)	1813792
2450	8.5	0.7	0.0	chr19	7868045	7868349	(50749267)	+	AluSc	SINE/Alu	1	307	(2)	1813879
28	4.3	3.9	3.7	chr19	8106557	8106608	(50511008)	+	(GGAT)n	Simple_repeat	1	54	(0)	1814412
487	23.1	2.6	0.7	chr19	8106653	8106729	(50510887)	+	(GATG)n	Simple_repeat	1	79	(0)	1814413
27	3.5	0.0	0.0	chr19	8106730	8106759	(50510857)	+	(TGGA)n	Simple_repeat	1	30	(0)	1814414
487	23.1	2.6	0.7	chr19	8106760	8107934	(50509682)	+	(GATG)n	Simple_repeat	4	1200	(0)	1814415
2535	5.5	0.0	0.3	chr19	8412533	8412840	(50204776)	C	AluY	SINE/Alu	(0)	311	5	1815248
1454	11.2	0.0	8.7	chr19	8412841	8412976	(50204640)	C	AluJr	SINE/Alu	(186)	126	1	1815247
369	20.3	1.8	1.4	chr19	8677897	8678734	(49938882)	+	(TCCA)n	Simple_repeat	1	853	(0)	1815899
366	22.6	13.8	0.0	chr19	9036684	9036789	(49580827)	C	MER5A1	DNA/hAT-Charlie	(0)	166	44	1816585
122	28.7	1.2	0.0	chr19	9036871	9037208	(49580408)	+	(TGGA)n	Simple_repeat	1	342	(0)	1816586
183	23.5	3.8	0.0	chr19	9037296	9037346	(49580270)	+	L2b	LINE/L2	3304	3356	(19)	1816587
334	17.9	2.9	0.0	chr19	9404686	9404752	(49212864)	C	Ricksha_c	DNA/MULE-MuDR	(1132)	916	848	1817373
2761	18.6	9.5	0.3	chr19	9404776	9405644	(49211972)	C	MER66-int	LTR/ERV1	(4515)	2161	1210	1817374
2054	12.4	0.3	0.0	chr19	9599564	9599846	(49017770)	+	AluSx	SINE/Alu	1	284	(28)	1817720
64	1.6	1.5	0.0	chr19	9599847	9599911	(49017705)	+	(GAATG)n	Simple_repeat	1	66	(0)	1817721
2115	8.3	8.9	0.0	chr19	9599912	9600188	(49017428)	+	AluSx	SINE/Alu	2	305	(7)	1817722
1118	16.2	3.6	1.4	chr19	10000058	10000276	(48617340)	+	MER87B	LTR/ERV1	286	509	(0)	1818663
386	25.7	4.1	9.1	chr19	10000389	10000452	(48617164)	+	L2	LINE/L2	2739	2801	(618)	1818664
32	0.0	0.0	0.0	chr19	10000453	10000482	(48617134)	+	(T)n	Simple_repeat	1	30	(0)	1818665
801	10.5	2.6	0.0	chr19	10000484	10000597	(48617019)	C	AluJr	SINE/Alu	(195)	117	1	1818666
975	16.9	0.0	2.8	chr19	10518227	10518403	(48099213)	C	AluJr	SINE/Alu	(8)	304	133	1819959
1524	11.7	16.3	5.8	chr19	11693452	11693854	(46923762)	C	MER4B	LTR/ERV1	(45)	565	121	1822950
281	17.6	1.9	0.0	chr19	11693858	11693908	(46923708)	+	THE1D	LTR/ERVL-MaLR	1	52	(329)	1822952
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
27	0.0	0.0	0.0	chr19	12401542	12401567	(46216049)	+	(T)n	Simple_repeat	1	26	(0)	1824374
36	0.0	0.0	0.0	chr19	12401570	12401600	(46216016)	+	(GA)n	Simple_repeat	1	31	(0)	1824375
2029	8.1	2.5	1.8	chr19	12401601	12401872	(46215744)	C	AluSg	SINE/Alu	(35)	275	2	1824376
2193	8.4	2.0	1.7	chr19	12441380	12441676	(46175940)	C	AluSg	SINE/Alu	(11)	299	2	1824455
1014	10.1	0.5	9.6	chr19	12441677	12441884	(46175732)	C	L1MA2	LINE/L1	(145)	6159	5971	1824456
1220	5.8	31.0	0.0	chr19	12736084	12736290	(45881326)	C	AluSx4	SINE/Alu	(10)	300	1	1825111
2286	9.2	0.0	1.6	chr19	12736293	12736596	(45881020)	C	AluSx	SINE/Alu	(13)	299	1	1825112
11	29.4	1.5	4.4	chr19	12792580	12792646	(45824970)	+	(AAGCGG)n	Simple_repeat	1	68	(0)	1825218
73	27.7	1.6	0.5	chr19	13495718	13496102	(45121514)	+	(CCAT)n	Simple_repeat	1	389	(0)	1826939
1887	14.7	1.1	2.7	chr19	13596980	13597271	(45020345)	+	AluJo	SINE/Alu	1	287	(25)	1827222
107	31.1	1.4	0.8	chr19	13597382	13597743	(45019873)	+	(ATGG)n	Simple_repeat	1	367	(0)	1827223
2362	8.8	0.0	0.0	chr19	13854122	13854415	(44763201)	C	AluSg	SINE/Alu	(16)	294	1	1827966
877	15.6	0.7	0.7	chr19	13854420	13854560	(44763056)	C	AluSx	SINE/Alu	(171)	141	1	1827967
1678	18.3	0.3	2.7	chr19	13854561	13854721	(44762895)	C	AluJo	SINE/Alu	(18)	294	134	1827968
2041	4.7	8.2	0.0	chr19	13854722	13855007	(44762609)	C	AluY	SINE/Alu	(0)	311	1	1827969
393	31.2	1.4	3.4	chr19	13906766	13906914	(44710702)	C	MIRb	SINE/MIR	(74)	194	49	1828084
339	23.0	13.8	0.0	chr19	13907045	13907144	(44710472)	+	MIRb	SINE/MIR	39	154	(114)	1828085
18	22.1	2.9	4.3	chr19	13952544	13952611	(44665005)	+	(GCG)n	Simple_repeat	1	70	(0)	1828204
24	8.3	7.7	0.0	chr19	14337890	14337901	(44279715)	+	A-rich	Low_complexity	1	12	(0)	1829229
2298	10.6	1.0	1.3	chr19	14337902	14338212	(44279404)	+	AluSz6	SINE/Alu	2	311	(1)	1829230
807	25.8	4.9	4.9	chr19	14419807	14419916	(44197700)	C	L1ME2	LINE/L1	(186)	5978	5875	1829443
2809	14.9	4.0	16.5	chr19	15106687	15106819	(43510797)	C	MER4A1_	LTR/ERV1	(469)	131	3	1831131
436	19.8	3.8	4.7	chr19	15106820	15106887	(43510729)	+	MLT1G3	LTR/ERVL-MaLR	527	593	(2)	1831130
30	14.1	2.6	5.0	chr19	15107324	15107429	(43510187)	+	G-rich	Low_complexity	1	103	(0)	1831135
1583	16.1	2.7	4.0	chr19	15310214	15310380	(43307236)	C	AluSx1	SINE/Alu	(12)	300	137	1831544
2283	7.2	0.4	0.0	chr19	15310381	15310658	(43306958)	C	AluY	SINE/Alu	(32)	279	1	1831545
208	25.0	3.5	2.9	chr19	16131337	16131852	(42485764)	+	(TGGA)n	Simple_repeat	1	524	(0)	1833182
56	1.8	0.0	0.0	chr19	16131853	16131907	(42485709)	+	(TGGT)n	Simple_repeat	1	55	(0)	1833183
208	25.0	3.5	2.9	chr19	16131908	16132152	(42485464)	+	(TGGA)n	Simple_repeat	1	241	(0)	1833184
328	33.9	2.4	7.3	chr19	16816079	16816339	(41801277)	C	MER102a	DNA/hAT-Charlie	(9)	321	74	1834876
3993	8.4	3.2	0.4	chr19	16824709	16825246	(41792370)	+	MER41A	LTR/ERV1	1	554	(0)	1834904
767	31.2	7.5	0.9	chr19	16825339	16825687	(41791929)	+	L2b	LINE/L2	2612	2985	(434)	1834905
729	23.9	14.2	0.5	chr19	16978523	16978711	(41638905)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1835202
106	38.2	3.8	1.4	chr19	16978732	16979366	(41638250)	+	(TCTA)n	Simple_repeat	1	659	(0)	1835203
237	17.2	1.7	0.0	chr19	16979368	16979425	(41638191)	C	L1ME2z	LINE/L1	(131)	6313	6255	1835204
96	16.4	0.0	0.0	chr19	16979426	16979592	(41638024)	+	(CCAT)n	Simple_repeat	1	167	(0)	1835205
226	32.8	0.6	0.9	chr19	17145903	17146362	(41471254)	+	(GATG)n	Simple_repeat	1	462	(0)	1835598
33	11.2	0.0	0.0	chr19	17146363	17146420	(41471196)	+	(ATGG)n	Simple_repeat	1	58	(0)	1835599
226	32.8	0.6	0.9	chr19	17146421	17146769	(41470847)	+	(GATG)n	Simple_repeat	3	347	(0)	1835600
862	12.9	8.0	3.2	chr19	17332246	17332400	(41285216)	C	FRAM	SINE/Alu	(11)	165	3	1836046
277	25.9	2.5	1.0	chr19	17445456	17446254	(41171362)	+	(CATC)n	Simple_repeat	1	819	(0)	1836371
278	28.5	8.7	3.5	chr19	17446496	17446637	(41170979)	+	L2b	LINE/L2	2701	2850	(569)	1836372
2451	5.2	0.0	0.0	chr19	17511032	17511319	(41106297)	C	AluSc8	SINE/Alu	(22)	289	2	1836555
2333	10.0	0.0	0.0	chr19	17703427	17703727	(40913889)	+	AluSx1	SINE/Alu	2	302	(10)	1837053
19	0.0	0.0	3.7	chr19	17703737	17703763	(40913853)	+	(ATA)n	Simple_repeat	1	27	(0)	1837054
16	16.3	4.9	0.0	chr19	17703869	17703909	(40913707)	+	(GATTG)n	Simple_repeat	1	43	(0)	1837055
508	26.3	18.8	0.0	chr19	17704158	17704351	(40913265)	C	MIR	SINE/MIR	(22)	240	2	1837056
214	29.8	7.5	5.3	chr19	17865921	17866051	(40751565)	+	MIRb	SINE/MIR	104	237	(31)	1837470
169	22.2	0.5	1.3	chr19	17866343	17866726	(40750890)	+	(CCAT)n	Simple_repeat	1	386	(0)	1837471
446	21.8	0.8	0.2	chr19	18083629	18084269	(40533347)	+	(CCAT)n	Simple_repeat	4	647	(0)	1838046
231	17.5	1.6	0.0	chr19	18084279	18084341	(40533275)	C	L1ME2z	LINE/L1	(126)	6318	6255	1838047
656	29.3	13.3	3.0	chr19	18108853	18109256	(40508360)	C	L2b	LINE/L2	(6)	3369	2918	1838131
181	32.4	4.3	1.8	chr19	18224033	18224145	(40393471)	+	L2c	LINE/L2	3005	3120	(267)	1838407
447	17.9	4.4	0.0	chr19	18295016	18295978	(40321638)	+	(TCCA)n	Simple_repeat	1	1005	(0)	1838559
207	31.7	1.6	0.0	chr19	18295986	18296045	(40321571)	C	L2a	LINE/L2	(1)	3425	3365	1838560
882	19.2	1.8	1.2	chr19	18522822	18522988	(40094628)	C	AluJb	SINE/Alu	(7)	305	138	1839005
1926	9.2	5.9	5.9	chr19	18590215	18590518	(40027098)	C	AluSz6	SINE/Alu	(6)	306	3	1839179
2056	13.4	3.9	0.3	chr19	18596257	18596555	(40021061)	+	AluSx	SINE/Alu	1	310	(2)	1839191
268	32.9	11.9	5.0	chr19	18799221	18799438	(39818178)	+	L2c	LINE/L2	3153	3387	(0)	1839586
169	7.6	3.4	3.0	chr19	18799442	18799769	(39817847)	+	(TGGA)n	Simple_repeat	1	339	(0)	1839587
211	28.7	1.8	0.5	chr19	18799776	18800388	(39817228)	+	(ATGG)n	Simple_repeat	1	624	(0)	1839588
620	18.9	0.9	0.7	chr19	18954145	18955367	(39662249)	+	(CATC)n	Simple_repeat	1	1234	(0)	1839911
1919	15.8	11.2	6.8	chr19	19668165	19668579	(38949037)	C	LTR21B	LTR/ERV1	(0)	437	2	1841393
577	30.0	7.4	2.9	chr19	24118352	24118809	(34498807)	C	L1MB2	LINE/L1	(642)	6231	5738	1847620
1770	18.9	0.0	0.7	chr19	24118830	24119125	(34498491)	+	AluSx3	SINE/Alu	1	294	(17)	1847626
625	31.0	8.8	7.3	chr19	29540663	29541461	(29076155)	C	L2c	LINE/L2	(2)	3385	2574	1850386
300	34.0	2.1	0.6	chr19	29541464	29542614	(29075002)	+	(GATG)n	Simple_repeat	1	1175	(0)	1850387
217	18.6	3.6	0.0	chr19	30408690	30409158	(28208458)	+	(ATCC)n	Simple_repeat	1	486	(0)	1851817
375	21.7	0.0	0.0	chr19	30409179	30409247	(28208369)	+	L2a	LINE/L2	3358	3426	(0)	1851818
219	21.9	0.4	0.8	chr19	31205931	31206402	(27411214)	+	(ATGG)n	Simple_repeat	1	474	(0)	1852894
1263	25.1	12.0	3.5	chr19	33351683	33352230	(25265386)	C	Tigger18a	DNA/TcMar-Tigger	(4)	848	248	1856654
411	23.5	0.0	8.5	chr19	33373111	33373240	(25244376)	+	SVA_E	Retroposon/SVA	194	312	(1070)	1856705
767	12.5	0.0	0.9	chr19	33373142	33373253	(25244363)	C	AluJo	SINE/Alu	(196)	116	6	1856706
185	29.6	21.8	1.1	chr19	33375853	33376033	(25241583)	C	L2	LINE/L2	(526)	2893	2665	1856709
222	31.6	11.4	4.1	chr19	33778034	33778155	(24839461)	C	MIR	SINE/MIR	(117)	145	14	1857292
42	35.7	1.4	0.9	chr19	33778542	33778750	(24838866)	+	A-rich	Low_complexity	1	212	(0)	1857293
47	0.0	0.0	0.0	chr19	33778898	33778937	(24838679)	+	(AC)n	Simple_repeat	1	40	(0)	1857294
251	28.4	12.4	0.0	chr19	33778939	33779128	(24838488)	+	L2	LINE/L2	1667	1883	(1536)	1857295
2715	9.7	0.8	0.5	chr19	33871890	33872261	(24745355)	C	THE1C	LTR/ERVL-MaLR	(0)	375	3	1857462
291	28.2	0.0	0.1	chr19	33872262	33872832	(24744784)	+	(CACC)n	Simple_repeat	4	573	(0)	1857463
769	21.0	1.2	1.2	chr19	34056712	34056875	(24560741)	+	L1MC4	LINE/L1	6444	6607	(1435)	1857791
299	19.3	2.0	1.1	chr19	34056885	34057550	(24560066)	+	(TGGA)n	Simple_repeat	1	672	(0)	1857792
14	22.7	5.8	5.4	chr19	35140881	35140967	(23476649)	+	(CCTCTC)n	Simple_repeat	1	92	(0)	1859804
2477	6.8	0.3	0.7	chr19	36190295	36190603	(22427013)	+	AluSp	SINE/Alu	1	308	(5)	1862078
597	23.6	3.2	8.1	chr19	36190604	36190694	(22426922)	+	MLT1D	LTR/ERVL-MaLR	106	188	(317)	1862077
2386	9.1	0.0	2.8	chr19	36190701	36191020	(22426596)	+	AluSz	SINE/Alu	1	311	(1)	1862079
1764	17.2	0.7	5.7	chr19	36536626	36536922	(22080694)	+	AluJb	SINE/Alu	1	282	(30)	1862747
48	0.0	0.0	0.0	chr19	36536923	36536966	(22080650)	+	(AAAAT)n	Simple_repeat	1	44	(0)	1862748
386	28.6	9.8	5.4	chr19	36536967	36537032	(22080584)	+	L1M5	LINE/L1	4760	4825	(1321)	1862738
225	23.9	2.9	0.0	chr19	36537191	36537257	(22080359)	+	L1PB	LINE/L1	4991	5059	(1087)	1862749
2664	5.5	0.3	0.0	chr19	36537333	36537625	(22079991)	C	AluY	SINE/Alu	(17)	294	1	1862750
609	24.6	14.5	0.5	chr19	37654034	37654241	(20963375)	C	MIR	SINE/MIR	(17)	245	4	1864833
438	30.5	2.6	7.0	chr19	37994202	37994356	(20623260)	+	MER113A	DNA/hAT-Charlie	118	272	(42)	1865571
33	38.0	2.3	1.4	chr19	39425917	39426133	(19191483)	+	(ATCC)n	Simple_repeat	1	222	(0)	1869036
207	26.1	11.2	7.8	chr19	39504875	39505003	(19112613)	C	L2c	LINE/L2	(229)	3158	3025	1869221
270	28.1	4.6	4.6	chr19	39996743	39996850	(18620766)	C	L2c	LINE/L2	(0)	3387	3280	1870082
2568	7.4	0.0	0.0	chr19	40012814	40013112	(18604504)	C	AluYj4	SINE/Alu	(12)	299	1	1870112
2188	9.5	1.1	0.0	chr19	40385720	40386002	(18231614)	C	AluSq2	SINE/Alu	(25)	288	3	1870928
1551	22.5	2.6	11.6	chr19	40386003	40386060	(18231556)	+	L2a	LINE/L2	3227	3281	(145)	1870926
728	31.9	7.0	5.7	chr19	40424526	40425238	(18192378)	C	L2a	LINE/L2	(145)	3242	2523	1871021
13	29.6	0.0	0.0	chr19	40425604	40425648	(18191968)	+	(CGG)n	Simple_repeat	1	45	(0)	1871022
389	28.1	14.5	8.5	chr19	40645777	40646142	(17971474)	C	L1ME4a	LINE/L1	(41)	6083	5692	1871602
227	21.7	0.0	0.0	chr19	40646353	40646398	(17971218)	C	MLT1K	LTR/ERVL-MaLR	(19)	523	478	1871603
956	7.4	0.0	0.0	chr19	40646400	40646521	(17971095)	+	AluSx3	SINE/Alu	185	306	(5)	1871604
286	33.0	2.5	2.5	chr19	41883869	41883986	(16733630)	C	MIR3	SINE/MIR	(61)	147	30	1874122
12	13.9	6.2	0.0	chr19	42176848	42176879	(16440737)	+	(CGCC)n	Simple_repeat	1	34	(0)	1874737
30	22.1	0.0	3.6	chr19	42177009	42177092	(16440524)	+	(GCGG)n	Simple_repeat	1	84	(0)	1874738
17	6.5	2.8	5.4	chr19	42177108	42177143	(16440473)	+	(GCCC)n	Simple_repeat	1	37	(0)	1874739
28	3.3	0.0	0.0	chr19	42177252	42177282	(16440334)	+	(CCCGCT)n	Simple_repeat	1	31	(0)	1874740
7920	7.5	1.1	0.0	chr19	43191200	43192195	(15425421)	C	LTR13	LTR/ERVK	(0)	1007	1	1876368
910	10.7	2.3	0.8	chr19	43651887	43652017	(14965599)	C	AluJr	SINE/Alu	(179)	133	1	1877330
228	29.6	6.6	0.0	chr19	43652580	43652650	(14964966)	C	L2b	LINE/L2	(41)	3334	3259	1877331
1865	18.5	0.0	0.0	chr19	43652653	43652950	(14964666)	C	AluJb	SINE/Alu	(14)	298	1	1877332
530	27.9	23.4	2.3	chr19	44002277	44002540	(14615076)	+	L2	LINE/L2	459	778	(2641)	1878040
532	31.1	5.0	0.5	chr19	44024720	44024929	(14592687)	+	L2a	LINE/L2	888	1107	(2312)	1878071
1642	22.8	7.4	3.3	chr19	44111462	44111864	(14505752)	+	L1MB5	LINE/L1	5655	6088	(86)	1878222
3328	12.6	7.9	3.1	chr19	44111865	44112444	(14505172)	C	LTR9	LTR/ERV1	(0)	612	3	1878223
2257	16.2	1.2	1.2	chr19	44164068	44164473	(14453143)	C	L1MB7	LINE/L1	(156)	6028	5623	1878307
1348	20.7	1.9	0.8	chr19	44164479	44164746	(14452870)	C	MLT1A0	LTR/ERVL-MaLR	(94)	271	1	1878309
337	29.3	14.2	4.6	chr19	44206824	44207020	(14410596)	C	L1ME3A	LINE/L1	(3594)	2552	2334	1878355
429	31.0	2.4	3.3	chr19	44207025	44207234	(14410382)	C	L1ME3A	LINE/L1	(5521)	721	514	1878355
356	27.1	1.9	4.5	chr19	44643586	44643737	(13973879)	+	MIR	SINE/MIR	7	150	(80)	1879203
1414	28.8	5.8	4.0	chr19	44676916	44677417	(13940199)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	11	1879304
43	0.0	4.5	0.0	chr19	44677433	44677476	(13940140)	+	(GA)n	Simple_repeat	1	46	(0)	1879306
198	34.5	9.8	2.9	chr19	44677495	44677664	(13939952)	C	L3	LINE/CR1	(176)	3923	3741	1879307
22	33.3	0.0	1.2	chr19	44845597	44845676	(13771940)	+	GA-rich	Low_complexity	1	80	(0)	1879787
34	3.0	0.0	0.0	chr19	45341181	45341214	(13276402)	+	(TG)n	Simple_repeat	1	34	(0)	1881061
29	0.0	0.0	0.0	chr19	45341555	45341579	(13276037)	+	(GT)n	Simple_repeat	1	25	(0)	1881062
34	3.0	0.0	0.0	chr19	45341769	45341802	(13275814)	+	(GT)n	Simple_repeat	1	34	(0)	1881063
302	32.1	5.5	0.6	chr19	45477998	45478220	(13139396)	+	L2b	LINE/L2	3106	3340	(47)	1881420
803	0.0	0.0	0.0	chr19	45478602	45478687	(13138929)	C	tRNA-SeC(e)-TGA	tRNA	(3)	86	1	1881421
248	29.5	2.1	6.9	chr19	45693190	45693291	(12924325)	+	MIR3	SINE/MIR	110	206	(2)	1882014
2191	8.0	5.5	0.0	chr19	45927336	45927624	(12689992)	+	AluSx1	SINE/Alu	1	306	(6)	1882601
591	24.4	5.2	2.4	chr19	45927752	45927919	(12689697)	+	LTR67B	LTR/ERVL	2	174	(446)	1882602
355	18.3	3.2	0.5	chr19	46330269	46331038	(12286578)	+	(ATGG)n	Simple_repeat	1	795	(0)	1883403
1105	14.7	10.1	0.0	chr19	46887291	46887522	(11730094)	+	L1MD3	LINE/L1	7728	7985	(10)	1884833
1900	16.7	1.6	0.3	chr19	47047569	47047874	(11569742)	+	AluJo	SINE/Alu	1	310	(2)	1885143
63	33.6	3.1	1.5	chr19	47405872	47406320	(11211296)	+	(GATG)n	Simple_repeat	1	456	(0)	1886089
230	20.0	0.0	0.0	chr19	47483859	47483903	(11133713)	C	MER117	DNA/hAT-Charlie	(95)	102	58	1886269
14	22.7	2.0	3.9	chr19	47515119	47515168	(11102448)	+	(CGC)n	Simple_repeat	1	51	(0)	1886320
1645	18.3	0.3	3.0	chr19	47744950	47745250	(10872366)	+	AluJo	SINE/Alu	1	293	(19)	1886957
83	25.4	1.0	0.0	chr19	47769009	47769209	(10848407)	+	(CCAT)n	Simple_repeat	1	203	(0)	1887011
263	7.9	0.0	0.0	chr19	47769210	47769247	(10848369)	+	L1MC5a	LINE/L1	1939	1976	(801)	1887012
2464	6.2	1.4	0.0	chr19	47769251	47769542	(10848074)	+	AluSx1	SINE/Alu	1	296	(16)	1887013
153	5.7	4.5	1.6	chr19	47769564	47769810	(10847806)	+	(CATC)n	Simple_repeat	1	258	(0)	1887014
2735	23.1	6.4	0.9	chr19	48181109	48181848	(10435768)	C	L1ME3A	LINE/L1	(7)	6166	5384	1888138
312	21.4	1.4	0.3	chr19	48548166	48548854	(10068762)	+	(TGGA)n	Simple_repeat	1	699	(0)	1889028
254	32.2	0.0	4.3	chr19	48903147	48903240	(9714376)	C	MIRb	SINE/MIR	(68)	200	111	1889908
330	17.4	21.8	0.0	chr19	48903274	48903359	(9714257)	+	L2a	LINE/L2	3317	3426	(0)	1889909
440	16.0	0.1	0.3	chr19	48903362	48904108	(9713508)	+	(ATGG)n	Simple_repeat	1	748	(0)	1889910
913	27.4	10.5	3.2	chr19	49084893	49085054	(9532562)	+	L2a	LINE/L2	3262	3426	(0)	1890340
238	24.7	7.2	1.9	chr19	49151379	49151455	(9466161)	C	MIR3	SINE/MIR	(34)	174	98	1890478
225	35.9	7.9	0.8	chr19	49420905	49421033	(9196583)	+	MIRb	SINE/MIR	18	156	(112)	1891072
950	21.1	0.5	1.9	chr19	49532976	49533183	(9084433)	C	MIR	SINE/MIR	(44)	218	14	1891316
332	22.1	2.8	4.8	chr19	49640837	49640967	(8976649)	C	MSR1	Satellite	(0)	128	1	1891595
262	27.0	1.1	3.3	chr19	49641001	49641092	(8976524)	C	MSR1	Satellite	(1)	110	21	1891595
288	26.2	5.0	0.2	chr19	49766133	49766271	(8851345)	+	MIRc	SINE/MIR	60	199	(31)	1891890
988	10.6	0.0	0.0	chr19	50137196	50137327	(8480289)	C	AluYa5	SINE/Alu	(179)	132	1	1892744
189	27.5	9.2	0.0	chr19	50252142	50252210	(8365406)	C	L2a	LINE/L2	(82)	3293	3218	1893104
536	31.2	1.9	0.0	chr19	50252241	50252442	(8365174)	C	L2a	LINE/L2	(299)	3127	2922	1893104
879	28.7	19.2	0.6	chr19	50384708	50385389	(8232227)	C	L2a	LINE/L2	(24)	3402	2482	1893387
2343	10.4	0.3	0.3	chr19	50385520	50385828	(8231788)	C	AluSx1	SINE/Alu	(3)	309	1	1893388
35	35.9	0.0	2.2	chr19	50444100	50444121	(8173495)	+	(TCCA)n	Simple_repeat	1	21	(0)	1893521
131	5.7	1.8	4.0	chr19	50444122	50444339	(8173277)	+	(CATC)n	Simple_repeat	1	222	(0)	1893522
35	35.9	0.0	2.2	chr19	50444340	50444497	(8173119)	+	(TCCA)n	Simple_repeat	2	156	(0)	1893523
297	31.7	1.6	10.4	chr19	50444504	50444598	(8173018)	C	L2b	LINE/L2	(0)	3426	3333	1893524
212	33.5	2.3	5.5	chr19	50479184	50479366	(8138250)	+	L2a	LINE/L2	2945	3121	(305)	1893617
228	20.7	1.7	0.0	chr19	50479627	50479684	(8137932)	C	MLT1J	LTR/ERVL-MaLR	(372)	140	82	1893618
19	0.0	0.0	0.0	chr19	50607990	50608010	(8009606)	+	(A)n	Simple_repeat	1	21	(0)	1893906
227	30.1	2.3	0.6	chr19	50644183	50644959	(7972657)	+	(TGGA)n	Simple_repeat	1	795	(0)	1893997
2387	7.9	0.0	0.7	chr19	51020668	51020971	(7596645)	+	AluSx3	SINE/Alu	1	302	(9)	1894832
721	27.3	8.8	0.0	chr19	51021025	51021211	(7596405)	+	MER3	DNA/hAT-Charlie	1	205	(4)	1894833
33	25.2	1.1	1.1	chr19	51060995	51061084	(7556532)	+	(ATCC)n	Simple_repeat	1	91	(0)	1894934
110	9.0	1.1	1.6	chr19	51061101	51061284	(7556332)	+	(CCAT)n	Simple_repeat	1	186	(0)	1894935
1069	27.5	19.3	1.0	chr19	51061339	51061925	(7555691)	+	L2a	LINE/L2	2304	3023	(396)	1894936
2029	14.8	3.9	0.5	chr19	51472580	51472953	(7144663)	C	L1MB3	LINE/L1	(15)	6168	5782	1895695
22	22.2	0.0	1.7	chr19	51473251	51473309	(7144307)	+	(AACAAT)n	Simple_repeat	1	59	(0)	1895696
411	28.9	5.8	7.6	chr19	54231813	54232015	(4385601)	C	ERV3-16A3_I-int	LTR/ERVL	(1072)	4154	3950	1901354
2167	10.9	3.2	0.7	chr19	54232016	54232318	(4385298)	C	AluSx1	SINE/Alu	(0)	312	2	1901355
131	4.8	2.1	2.6	chr19	54304742	54304927	(4312689)	+	(TTTC)n	Simple_repeat	1	190	(0)	1901463
1749	16.0	2.6	1.0	chr19	54927946	54928252	(3689364)	+	AluSz6	SINE/Alu	1	312	(0)	1902556
1664	14.8	2.7	1.4	chr19	54928253	54928417	(3689199)	+	AluSz	SINE/Alu	137	306	(6)	1902555
188	27.6	5.4	3.3	chr19	54928717	54928806	(3688810)	C	L2	LINE/L2	(447)	2972	2881	1902557
305	31.3	0.0	0.0	chr19	55385569	55385651	(3231965)	C	L2a	LINE/L2	(1)	3425	3343	1903625
543	25.9	9.0	0.0	chr19	55447550	55447711	(3169905)	+	MER91A	DNA/hAT-Tip100	2	179	(17)	1903757
231	16.7	0.0	2.0	chr19	55447755	55447803	(3169813)	+	Zaphod2	DNA/hAT-Tip100	3470	3517	(7)	1903758
589	10.8	7.6	0.1	chr19	55448013	55449159	(3168457)	+	(AC)n	Simple_repeat	1	1234	(0)	1903759
550	24.2	0.7	0.5	chr19	55542140	55543440	(3074176)	+	(ATCC)n	Simple_repeat	1	1310	(0)	1903961
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
38964	6.7	2.3	0.1	chr19	57195090	57199946	(1417670)	C	HERVL-int	LTR/ERVL	(2)	5652	688	1907416
17	0.0	0.0	0.0	chr19	58401886	58401904	(215712)	+	(A)n	Simple_repeat	1	19	(0)	1909472
1178	6.7	0.0	1.3	chr19	58401920	58402069	(215547)	+	AluSx1	SINE/Alu	134	281	(31)	1909473
262	19.5	0.0	4.0	chr19	58402465	58402540	(215076)	C	L1MB8	LINE/L1	(1)	6183	6109	1909474
4344	8.3	1.2	0.2	chr2	493692	494272	(241699257)	C	L1PA13	LINE/L1	(0)	6163	5577	1911304
887	10.0	0.0	0.0	chr2	494276	494413	(241699116)	+	L1PA13	LINE/L1	5410	5547	(621)	1911304
23	26.6	2.2	4.3	chr2	3294946	3295037	(238898492)	+	(AC)n	Simple_repeat	1	94	(0)	1914276
1497	27.9	16.0	4.2	chr2	3520483	3521318	(238672211)	+	L2c	LINE/L2	1851	2822	(597)	1914572
1738	16.4	4.7	0.0	chr2	3521319	3521605	(238671924)	+	AluSg	SINE/Alu	2	302	(8)	1914573
1314	30.4	6.5	1.3	chr2	8667450	8667926	(233525603)	+	L2a	LINE/L2	2923	3426	(0)	1921711
382	33.9	6.0	3.3	chr2	9058308	9058403	(233135126)	C	L1M4	LINE/L1	(1934)	4212	4120	1922245
1359	26.6	17.6	0.3	chr2	9058405	9059038	(233134491)	C	LTR50	LTR/ERVL	(103)	692	1	1922247
480	29.1	5.0	0.0	chr2	9651974	9652162	(232541367)	+	LTR33	LTR/ERVL	297	495	(20)	1923364
173	8.1	3.9	3.3	chr2	9652179	9652560	(232540969)	+	(TCCA)n	Simple_repeat	1	397	(0)	1923365
15	12.2	0.0	0.0	chr2	9652577	9652603	(232540926)	+	(CCAT)n	Simple_repeat	1	27	(0)	1923366
203	34.1	9.2	5.2	chr2	9652653	9652788	(232540741)	C	L2b	LINE/L2	(8)	3367	3226	1923353
201	17.9	0.0	0.0	chr2	9740032	9740387	(232453142)	+	(TCCA)n	Simple_repeat	1	356	(0)	1923564
248	30.3	13.2	2.2	chr2	9757367	9757548	(232435981)	+	L2a	LINE/L2	3137	3341	(85)	1923599
682	31.6	3.1	1.9	chr2	10452193	10452515	(231741014)	+	MARNA	DNA/TcMar-Mariner	231	557	(29)	1924780
466	32.6	4.4	2.0	chr2	10891811	10892010	(231301519)	C	MIRb	SINE/MIR	(30)	238	34	1925678
352	33.5	4.1	0.2	chr2	10892052	10892237	(231301292)	C	MIRb	SINE/MIR	(15)	193	1	1925679
106	20.9	0.5	0.0	chr2	10892384	10892604	(231300925)	+	(CCAT)n	Simple_repeat	1	222	(0)	1925680
94	27.7	0.6	4.2	chr2	11155100	11155450	(231038079)	+	G-rich	Low_complexity	1	353	(0)	1926128
2425	9.2	0.0	2.8	chr2	11255638	11255954	(230937575)	+	AluSz	SINE/Alu	1	308	(4)	1926302
253	25.9	12.8	0.0	chr2	11255969	11256084	(230937445)	+	L1M4a1	LINE/L1	1181	1313	(5102)	1926299
1825	12.7	6.2	2.0	chr2	11466438	11466729	(230726800)	C	AluJo	SINE/Alu	(7)	305	1	1926688
453	29.4	3.5	3.0	chr2	11584031	11584198	(230609331)	C	MER5B	DNA/hAT-Charlie	(2)	176	8	1926915
5982	17.7	3.9	1.7	chr2	14944571	14945798	(227247731)	+	L1M3f	LINE/L1	1238	2493	(5072)	1931946
1923	29.0	13.0	8.8	chr2	15243543	15244790	(226948739)	+	MLT1J1-int	LTR/ERVL-MaLR	46	1353	(34)	1932423
1042	33.0	3.2	0.9	chr2	18378614	18379038	(223814491)	C	LTR16	LTR/ERVL	(0)	438	4	1937369
473	25.6	1.8	11.6	chr2	20014185	20014244	(222179285)	+	MLT1N2	LTR/ERVL-MaLR	3	47	(515)	1939605
3051	14.9	1.2	4.7	chr2	20014245	20014780	(222178749)	C	MLT2B1	LTR/ERVL	(3)	517	1	1939606
473	25.6	1.8	11.6	chr2	20014781	20014909	(222178620)	+	MLT1N2	LTR/ERVL-MaLR	48	173	(389)	1939605
650	19.8	12.4	1.3	chr2	20342979	20343135	(221850394)	C	AluJb	SINE/Alu	(31)	281	105	1940175
848	20.3	0.0	0.0	chr2	20343234	20343376	(221850153)	+	AluJb	SINE/Alu	123	265	(47)	1940176
338	5.9	7.5	3.9	chr2	20343377	20343427	(221850102)	+	AluJo	SINE/Alu	241	293	(19)	1940177
14	22.7	4.3	0.0	chr2	20343433	20343478	(221850051)	+	A-rich	Low_complexity	1	48	(0)	1940178
772	25.4	10.7	3.8	chr2	20430490	20430869	(221762660)	+	MLT1H	LTR/ERVL-MaLR	3	440	(139)	1940358
322	30.0	4.3	1.8	chr2	24349388	24349499	(217844030)	C	Charlie4z	DNA/hAT-Charlie	(22)	145	31	1945916
348	4.7	0.0	0.0	chr2	24349644	24349686	(217843843)	C	MER41B	LTR/ERV1	(114)	520	478	1945917
1104	26.5	11.6	2.6	chr2	24349841	24350255	(217843274)	C	Charlie20a	DNA/hAT-Charlie	(337)	470	14	1945918
38	2.4	0.0	2.2	chr2	25009884	25009928	(217183601)	+	(AAATCACCAT)n	Simple_repeat	1	45	(0)	1947117
393	30.9	11.3	0.6	chr2	25009948	25010113	(217183416)	+	MIR3	SINE/MIR	4	189	(19)	1947118
260	25.6	18.8	7.9	chr2	26013639	26013765	(216179764)	+	MamTip3	DNA/hAT-Tip100	190	333	(167)	1949129
354	25.0	4.0	0.0	chr2	26013883	26013978	(216179551)	+	LTR103b_Mam	LTR/ERV1?	368	467	(81)	1949130
2185	13.5	0.0	0.0	chr2	26014092	26014394	(216179135)	+	AluSx1	SINE/Alu	1	303	(9)	1949131
23	16.2	2.0	0.0	chr2	26033766	26033814	(216159715)	+	G-rich	Low_complexity	1	50	(0)	1949188
13	13.3	6.1	0.0	chr2	26414862	26414894	(215778635)	+	(CCTCT)n	Simple_repeat	1	35	(0)	1949921
2327	11.5	0.0	0.0	chr2	26525805	26526116	(215667413)	+	AluSz	SINE/Alu	1	312	(0)	1950087
168	25.4	0.2	0.7	chr2	26526117	26526476	(215667053)	+	(ATGG)n	Simple_repeat	4	361	(0)	1950088
27	9.8	0.0	0.0	chr2	26526490	26526533	(215666996)	+	(GATG)n	Simple_repeat	1	44	(0)	1950089
267	35.4	3.0	7.7	chr2	26526642	26526849	(215666680)	C	L3	LINE/CR1	(519)	3580	3383	1950083
328	34.2	9.5	6.1	chr2	26679125	26679671	(215513858)	C	L2c	LINE/L2	(0)	3387	2822	1950378
186	32.1	0.0	1.8	chr2	26679792	26679848	(215513681)	C	MIRb	SINE/MIR	(24)	244	189	1950379
988	29.2	7.0	7.0	chr2	27995880	27996416	(214197113)	C	L1MEg1	LINE/L1	(5242)	2308	1787	1952835
1174	27.7	5.0	1.1	chr2	27996530	27996956	(214196573)	C	L1MEg1	LINE/L1	(5921)	531	10	1952835
195	26.1	5.5	1.4	chr2	28584145	28584214	(213609315)	+	L2b	LINE/L2	3303	3375	(0)	1953819
3078	11.0	4.5	0.2	chr2	28949416	28949878	(213243651)	C	MER1A	DNA/hAT-Charlie	(9)	520	37	1954540
1402	26.2	18.1	1.9	chr2	28949879	28950805	(213242724)	C	L2a	LINE/L2	(169)	3257	2150	1954539
5928	23.3	2.2	1.4	chr2	29425023	29426266	(212767263)	+	L1M4b	LINE/L1	2	1256	(5611)	1955297
376	16.9	2.5	1.3	chr2	29426268	29426345	(212767184)	C	MLT1C	LTR/ERVL-MaLR	(385)	82	4	1955298
1767	7.0	0.0	0.0	chr2	30238886	30239099	(211954430)	C	AluSx3	SINE/Alu	(8)	303	90	1956618
299	30.6	5.8	0.0	chr2	30453577	30453674	(211739855)	C	L2c	LINE/L2	(18)	3369	3266	1957042
340	29.3	6.2	2.6	chr2	30711474	30711627	(211481902)	+	MIRb	SINE/MIR	82	241	(27)	1957450
1267	23.0	12.4	9.0	chr2	30711628	30712222	(211481307)	+	LTR41C	LTR/ERVL	1	623	(78)	1957451
555	21.1	6.7	9.5	chr2	32459092	32459470	(209734059)	C	L1MB7	LINE/L1	(77)	6107	5634	1960354
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2100	24.2	5.2	2.1	chr2	37085703	37086221	(205107308)	C	MLT1F	LTR/ERVL-MaLR	(12)	536	1	1967102
2479	25.2	9.8	2.7	chr2	37173222	37174227	(205019302)	+	L2a	LINE/L2	2080	3170	(256)	1967274
1399	17.1	13.4	0.0	chr2	37174228	37174492	(205019037)	C	AluJb	SINE/Alu	(0)	312	6	1967275
225	34.6	5.7	1.5	chr2	37588391	37588525	(204605004)	+	MIR3	SINE/MIR	45	185	(23)	1967970
496	33.1	10.9	9.2	chr2	37588496	37589097	(204604432)	+	L2b	LINE/L2	2757	3386	(1)	1967971
1649	7.3	0.5	0.0	chr2	38536547	38536750	(203656779)	+	AluSx	SINE/Alu	103	307	(5)	1969427
2064	13.1	9.0	6.0	chr2	38667852	38668189	(203525340)	+	MER39	LTR/ERV1	258	615	(92)	1969679
959	18.6	0.0	0.6	chr2	38668190	38668350	(203525179)	C	FRAM	SINE/Alu	(16)	160	1	1969680
2064	13.1	9.0	6.0	chr2	38668351	38668409	(203525120)	+	MER39	LTR/ERV1	616	668	(39)	1969679
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
298	24.7	6.1	0.0	chr2	42061455	42061531	(200131998)	C	MIRb	SINE/MIR	(26)	242	161	1974882
719	13.3	0.9	0.0	chr2	42975704	42975808	(199217721)	C	AluJb	SINE/Alu	(29)	283	178	1976650
189	29.8	1.7	0.0	chr2	44953493	44953549	(197239980)	C	L2c	LINE/L2	(77)	3298	3241	1980000
2143	8.5	0.0	3.1	chr2	44953957	44954275	(197239254)	+	AluSc5	SINE/Alu	1	309	(0)	1980001
188	31.9	8.9	2.6	chr2	46520525	46520640	(195672889)	+	L2b	LINE/L2	3015	3138	(237)	1982387
589	22.8	3.9	3.2	chr2	46520873	46521026	(195672503)	C	L1ME3B	LINE/L1	(10)	6232	6078	1982388
6121	11.9	13.4	1.0	chr2	46642561	46643641	(195549888)	C	MER11B	LTR/ERVK	(0)	1236	1	1982580
142	27.1	2.9	0.2	chr2	46999055	46999472	(195194057)	+	(CCAT)n	Simple_repeat	1	430	(0)	1983225
2202	9.1	0.0	0.7	chr2	47082102	47082387	(195111142)	+	AluSz	SINE/Alu	1	284	(28)	1983334
32	0.0	0.0	0.0	chr2	47082388	47082417	(195111112)	+	(AAAT)n	Simple_repeat	1	30	(0)	1983335
2361	18.7	6.7	3.5	chr2	47082418	47082781	(195110748)	+	MLT1D	LTR/ERVL-MaLR	126	504	(1)	1983333
1492	25.5	2.8	2.3	chr2	47207158	47207288	(194986241)	+	L2a	LINE/L2	2590	2716	(703)	1983538
1100	15.6	0.0	1.2	chr2	47207289	47207455	(194986074)	C	FRAM	SINE/Alu	(11)	165	1	1983539
1492	24.8	2.6	3.8	chr2	47207456	47207895	(194985634)	+	L2a	LINE/L2	2717	3401	(25)	1983538
216	4.5	2.1	2.0	chr2	47502415	47502702	(194690827)	+	(ATGGATGG)n	Simple_repeat	1	294	(0)	1984225
494	26.0	4.6	2.5	chr2	47502780	47502985	(194690544)	C	MIRb	SINE/MIR	(32)	236	34	1984226
846	23.4	5.5	3.0	chr2	48189510	48189676	(194003853)	+	L1MC4	LINE/L1	7687	7856	(186)	1985526
5053	12.1	6.5	0.1	chr2	48189677	48190444	(194003085)	C	LTR8B	LTR/ERV1	(0)	820	1	1985527
999	19.2	7.5	6.3	chr2	54116227	54116620	(188076909)	C	Charlie2b	DNA/hAT-Charlie	(77)	2705	2307	1993802
393	29.4	10.9	7.5	chr2	55112221	55112459	(187081070)	C	MIRb	SINE/MIR	(0)	268	21	1995315
2439	6.5	0.0	0.3	chr2	55223800	55224093	(186969436)	C	AluSg	SINE/Alu	(16)	294	2	1995514
1035	18.4	6.5	2.1	chr2	55490372	55490644	(186702885)	C	Charlie5	DNA/hAT-Charlie	(0)	324	13	1995997
258	23.6	13.9	1.1	chr2	55490644	55490737	(186702792)	+	MLT1O	LTR/ERVL-MaLR	98	205	(337)	1995998
335	27.6	2.3	0.2	chr2	55490848	55490956	(186702573)	+	MLT1O	LTR/ERVL-MaLR	431	541	(21)	1995998
7707	17.4	2.4	0.5	chr2	58005706	58007035	(184186494)	+	ERVL-B4-int	LTR/ERVL	513	1868	(3846)	1999236
11287	9.4	1.3	0.4	chr2	58210497	58212062	(183981467)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1999476
14	11.8	8.1	0.0	chr2	58749200	58749236	(183444293)	+	(TTGGCA)n	Simple_repeat	1	40	(0)	2000224
13	21.0	4.5	0.0	chr2	61470531	61470574	(180722955)	+	(CCGCCCG)n	Simple_repeat	1	46	(0)	2004393
13	18.8	0.0	5.0	chr2	61471025	61471035	(180722494)	+	(CACCGC)n	Simple_repeat	1	39	(0)	2004394
16	11.6	0.0	0.0	chr2	61471036	61471063	(180722466)	+	(CGC)n	Simple_repeat	1	28	(0)	2004395
1008	28.7	10.6	1.4	chr2	61620867	61621257	(180572272)	C	MLT1G	LTR/ERVL-MaLR	(14)	541	129	2004765
2135	11.5	0.0	1.7	chr2	61621259	61621546	(180571983)	+	AluSx	SINE/Alu	1	283	(29)	2004766
327	33.9	7.7	8.0	chr2	62708708	62709361	(179484168)	C	L2c	LINE/L2	(231)	3156	2495	2006893
3596	25.3	6.9	1.9	chr2	63469873	63471268	(178722261)	+	L2a	LINE/L2	1948	3426	(0)	2007911
1771	26.5	3.1	4.5	chr2	64003860	64004618	(178188911)	+	L1MC4	LINE/L1	6744	7494	(548)	2008651
1385	19.1	7.5	6.3	chr2	64004619	64004786	(178188743)	C	Charlie4a	DNA/hAT-Charlie	(0)	508	326	2008652
2019	15.5	1.0	0.0	chr2	64004787	64005077	(178188452)	C	AluJo	SINE/Alu	(18)	294	1	2008653
588	22.0	16.4	3.8	chr2	64032324	64032588	(178160941)	+	L1ME3A	LINE/L1	5866	6170	(3)	2008708
768	29.0	7.4	2.3	chr2	64032638	64033022	(178160507)	C	MLT1K	LTR/ERVL-MaLR	(182)	413	8	2008711
22	3.6	0.0	0.0	chr2	64750746	64750774	(177442755)	+	(GAG)n	Simple_repeat	1	29	(0)	2009875
18	6.3	2.7	5.3	chr2	64750840	64750876	(177442653)	+	(GGC)n	Simple_repeat	1	38	(0)	2009876
18	11.9	3.9	5.7	chr2	64751033	64751083	(177442446)	+	(GGAGC)n	Simple_repeat	1	53	(0)	2009877
13	24.2	3.6	1.8	chr2	64751221	64751275	(177442254)	+	(GTGGAGG)n	Simple_repeat	1	57	(0)	2009878
896	15.1	1.4	2.7	chr2	65049196	65049345	(177144184)	C	LTR72B	LTR/ERV1	(0)	500	353	2010480
2200	13.6	3.4	0.9	chr2	65049333	65049681	(177143848)	C	LTR45B	LTR/ERV1	(131)	358	1	2010481
855	24.7	7.7	7.1	chr2	65049682	65050215	(177143314)	C	L1MC4	LINE/L1	(621)	7421	6999	2010482
2108	8.4	5.2	2.0	chr2	65186713	65187008	(177006521)	C	AluSq	SINE/Alu	(7)	306	1	2010785
15	31.6	0.0	2.9	chr2	65436156	65436189	(176757340)	+	(CGCCC)n	Simple_repeat	1	68	(0)	2011239
11926	17.9	5.2	2.8	chr2	66404590	66405211	(175788318)	+	L1MC3	LINE/L1	6389	7038	(922)	2012744
243	32.0	7.9	3.0	chr2	67738692	67738823	(174454706)	C	L2c	LINE/L2	(292)	3095	2957	2014473
388	23.6	1.4	0.0	chr2	67738899	67738970	(174454559)	+	AluJr	SINE/Alu	129	201	(111)	2014474
25174	6.5	0.8	0.2	chr2	67738971	67745083	(174448446)	C	L1PA6	LINE/L1	(4)	6323	195	2014475
255	4.2	0.0	0.4	chr2	67906469	67906741	(174286788)	+	(GGAAA)n	Simple_repeat	1	273	(0)	2014731
208	32.2	6.8	7.3	chr2	67917740	67917930	(174275599)	+	L2c	LINE/L2	2972	3161	(226)	2014750
2262	11.0	0.0	0.7	chr2	67917972	67918272	(174275257)	C	AluSq	SINE/Alu	(14)	299	1	2014751
5160	15.5	10.0	3.8	chr2	68228373	68229033	(173964496)	C	L1MDa	LINE/L1	(2681)	3856	3144	2015268
1441	19.3	4.9	1.8	chr2	68229034	68229308	(173964221)	C	AluJr	SINE/Alu	(24)	288	5	2015269
5160	16.0	10.1	3.6	chr2	68229309	68229965	(173963564)	C	L1MDa	LINE/L1	(3394)	3143	2471	2015268
11	20.5	2.9	0.0	chr2	68252737	68252770	(173940759)	+	G-rich	Low_complexity	1	35	(0)	2015306
2311	10.0	0.3	0.0	chr2	68361726	68362014	(173831515)	+	AluSx	SINE/Alu	1	290	(22)	2015503
211	21.2	0.4	4.3	chr2	68362303	68362367	(173831162)	+	L2c	LINE/L2	3309	3383	(4)	2015504
4583	17.3	4.6	4.5	chr2	69610074	69611028	(172582501)	+	L1MB3	LINE/L1	4705	5650	(530)	2017377
1623	20.7	7.2	11.5	chr2	69611029	69611640	(172581889)	+	MLT2B5	LTR/ERVL	1	590	(11)	2017381
660	21.4	17.0	2.1	chr2	70340870	70341325	(171852204)	C	MLT1F	LTR/ERVL-MaLR	(5)	543	1	2018933
410	31.7	1.6	0.8	chr2	70900986	70901106	(171292423)	C	L2b	LINE/L2	(2)	3373	3252	2019792
731	15.1	6.2	5.1	chr2	70947284	70947458	(171246071)	C	MER5A	DNA/hAT-Charlie	(12)	177	1	2019880
333	11.8	1.9	0.0	chr2	71277402	71277452	(170916077)	+	MER31A	LTR/ERV1	353	404	(81)	2020407
490	30.3	5.9	4.2	chr2	74002092	74002308	(168191221)	+	MIR	SINE/MIR	9	229	(33)	2024612
290	15.7	1.8	2.8	chr2	74198223	74198296	(167995233)	+	L2a	LINE/L2	3313	3426	(0)	2024986
953	31.1	9.3	4.3	chr2	74831585	74832432	(167361097)	C	L2a	LINE/L2	(282)	3144	1981	2026053
235	30.7	7.4	2.2	chr2	84881618	84881707	(157311822)	+	MIRb	SINE/MIR	148	242	(26)	2039571
278	25.7	11.4	5.1	chr2	84881924	84882079	(157311450)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	1	2039573
1649	15.3	19.7	1.1	chr2	84919766	84920220	(157273309)	C	MER44B	DNA/TcMar-Tigger	(0)	550	6	2039670
2876	15.5	1.5	1.1	chr2	84920228	84920696	(157272833)	+	MLT2B3	LTR/ERVL	45	515	(39)	2039669
16	14.2	0.0	0.0	chr2	85612145	85612175	(156581354)	+	(TCGGG)n	Simple_repeat	1	31	(0)	2041126
19	14.4	0.0	0.0	chr2	85612207	85612237	(156581292)	+	(T)n	Simple_repeat	1	31	(0)	2041127
304	30.6	3.9	0.0	chr2	85612390	85612487	(156581042)	+	MIR	SINE/MIR	81	182	(80)	2041128
78	22.3	5.9	2.1	chr2	85667310	85667581	(156525948)	+	(TCTCA)n	Simple_repeat	1	288	(0)	2041252
14	20.2	0.0	0.0	chr2	86195447	86195480	(155998049)	+	(GCGT)n	Simple_repeat	1	34	(0)	2042218
234	29.3	0.0	2.6	chr2	86195964	86196040	(155997489)	C	MIRb	SINE/MIR	(186)	82	8	2042219
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
1763	18.9	0.3	0.3	chr2	88060058	88060358	(154133171)	C	AluJb	SINE/Alu	(11)	301	1	2045215
1497	19.2	0.0	1.1	chr2	88060359	88060422	(154133107)	C	MER58B	DNA/hAT-Charlie	(218)	123	61	2045214
390	21.5	0.1	0.5	chr2	88469305	88470127	(153723402)	+	(ACTCT)n	Simple_repeat	1	824	(0)	2046087
273	34.9	0.4	0.0	chr2	88628199	88628309	(153565220)	C	MIR3	SINE/MIR	(145)	123	11	2046399
1864	15.3	0.7	1.0	chr2	88628529	88628822	(153564707)	C	AluJr4	SINE/Alu	(19)	293	1	2046400
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
79	4.4	1.0	1.0	chr2	91423327	91423422	(150770107)	+	(CCATT)n	Simple_repeat	1	97	(0)	2048315
2303	8.8	0.0	0.0	chr2	94986080	94986362	(147207167)	C	AluSq2	SINE/Alu	(29)	284	2	2050024
1051	19.7	14.7	1.1	chr2	94986408	94986694	(147206835)	C	L1MC5	LINE/L1	(904)	8400	8068	2050025
2097	13.6	14.0	0.5	chr2	95224347	95224716	(146968813)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2050379
2044	19.2	2.8	2.3	chr2	95224717	95225093	(146968436)	+	MSTD	LTR/ERVL-MaLR	15	396	(0)	2050378
19	20.4	0.0	3.7	chr2	95345722	95345775	(146847754)	+	G-rich	Low_complexity	1	54	(0)	2050548
25	28.2	2.0	6.0	chr2	96760837	96760984	(145432545)	+	G-rich	Low_complexity	1	151	(0)	2052732
1656	17.8	1.4	2.0	chr2	97653035	97653327	(144540202)	+	AluJb	SINE/Alu	1	291	(21)	2053936
3023	22.4	10.9	10.2	chr2	97653328	97654281	(144539248)	C	L1MC4a	LINE/L1	(498)	7384	6487	2053934
7423	18.2	5.9	6.1	chr2	101103692	101104733	(141088796)	+	L1MC3	LINE/L1	4399	5465	(1099)	2058966
1006	15.0	1.3	0.0	chr2	101439717	101439869	(140753660)	C	AluSq2	SINE/Alu	(17)	296	142	2059589
970	22.9	4.1	1.3	chr2	101439878	101440116	(140753413)	C	L1MD2	LINE/L1	(1309)	5228	4983	2059586
4601	24.8	8.4	5.5	chr2	102470018	102471357	(139722172)	C	L1M4b	LINE/L1	(5484)	1383	1	2061116
28	19.9	0.0	0.0	chr2	104656798	104656850	(137536679)	+	A-rich	Low_complexity	1	53	(0)	2063810
19	16.9	8.8	1.4	chr2	104852476	104852543	(137340986)	+	(GGCTGCG)n	Simple_repeat	1	74	(0)	2064060
16	16.8	0.0	0.0	chr2	104852749	104852775	(137340754)	+	(C)n	Simple_repeat	1	27	(0)	2064061
33	31.6	1.5	0.8	chr2	104854134	104854263	(137339266)	+	GA-rich	Low_complexity	1	132	(0)	2064065
1852	7.7	13.0	0.0	chr2	109199080	109199326	(132994203)	+	AluY	SINE/Alu	3	286	(25)	2070423
603	0.2	0.2	0.0	chr2	109199331	109199851	(132993678)	+	(AATGG)n	Simple_repeat	1	522	(0)	2070424
238	23.7	1.7	0.0	chr2	109199866	109199924	(132993605)	C	MLT1A0	LTR/ERVL-MaLR	(314)	60	1	2070421
310	13.9	2.7	2.7	chr2	109199944	109200017	(132993512)	+	MER20	DNA/hAT-Charlie	31	104	(115)	2070425
248	20.8	18.1	0.0	chr2	109200002	109200078	(132993451)	+	MER20	DNA/hAT-Charlie	123	216	(3)	2070426
2176	8.8	1.8	0.4	chr2	109604445	109604717	(132588812)	+	AluYm1	SINE/Alu	1	277	(34)	2070939
17	35.4	2.2	2.1	chr2	109604718	109604735	(132588794)	+	GA-rich	Low_complexity	75	92	(0)	2070940
1856	11.4	3.7	4.0	chr2	111884655	111884951	(130308578)	+	AluJo	SINE/Alu	9	304	(8)	2074183
468	21.6	8.6	2.6	chr2	112541561	112541712	(129651817)	+	L1ME1	LINE/L1	6015	6176	(3)	2075273
485	27.1	0.8	0.0	chr2	112970135	112970263	(129223266)	C	MER5B	DNA/hAT-Charlie	(40)	138	9	2076037
1837	34.8	7.8	2.9	chr2	112970270	112970853	(129222676)	+	ERVL-E-int	LTR/ERVL	1143	1769	(3898)	2076036
2145	25.0	9.1	1.7	chr2	114060498	114061123	(128132406)	+	L2a	LINE/L2	2228	2889	(530)	2077834
2424	8.4	1.3	0.0	chr2	114061124	114061421	(128132108)	+	AluSx1	SINE/Alu	1	302	(10)	2077835
20	22.4	1.3	5.3	chr2	118185529	118185603	(124007926)	+	G-rich	Low_complexity	1	76	(0)	2083311
1994	13.2	0.3	0.3	chr2	119517166	119517453	(122676076)	C	AluJr	SINE/Alu	(18)	294	7	2085496
4620	17.3	2.4	5.3	chr2	119517454	119517469	(122676060)	+	L1MA9	LINE/L1	6271	6286	(26)	2085494
1260	20.6	8.0	7.7	chr2	119517840	119518228	(122675301)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2085497
240	33.3	7.5	1.6	chr2	119815198	119815322	(122378207)	+	MIRb	SINE/MIR	84	216	(52)	2086000
15	18.4	2.7	0.0	chr2	120736788	120736824	(121456705)	+	(CCTT)n	Simple_repeat	1	38	(0)	2087494
15	35.9	1.0	2.9	chr2	120736815	120736915	(121456614)	+	(CCTCC)n	Simple_repeat	1	102	(0)	2087495
455	27.3	3.4	0.7	chr2	121160537	121160680	(121032849)	+	MER117	DNA/hAT-Charlie	2	149	(48)	2088183
2445	16.7	8.4	1.4	chr2	121532350	121532848	(120660681)	+	L1MC3	LINE/L1	7147	7683	(102)	2088815
4734	12.3	4.9	5.2	chr2	126307724	126308563	(115884966)	C	LTR1A2	LTR/ERV1	(0)	837	1	2095747
44431	7.2	1.6	0.1	chr2	126646416	126651983	(115541546)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2096188
2407	18.3	1.6	2.8	chr2	128225309	128225635	(113967894)	C	L1MD2	LINE/L1	(3211)	3326	2992	2098890
783	16.9	2.4	2.2	chr2	128225636	128225809	(113967720)	+	MSTB	LTR/ERVL-MaLR	1	178	(250)	2098908
260	6.2	0.0	0.0	chr2	128225796	128225827	(113967702)	+	MSTB	LTR/ERVL-MaLR	102	133	(324)	2098908
6587	20.8	8.9	7.4	chr2	131541893	131544506	(110649023)	+	REP522	Satellite/telo	1	2654	(1250)	2103442
935	14.5	0.0	9.3	chr2	135739274	135739445	(106454084)	C	AluJo	SINE/Alu	(20)	292	137	2109532
359	35.7	12.6	2.1	chr2	135739457	135739673	(106453856)	+	L2c	LINE/L2	2566	2828	(591)	2109526
2205	12.1	0.0	0.0	chr2	135739674	135739971	(106453558)	C	AluSg	SINE/Alu	(12)	298	1	2109533
525	24.8	3.6	1.5	chr2	135811263	135811397	(106382132)	+	MLT1D	LTR/ERVL-MaLR	12	149	(356)	2109650
703	19.0	0.0	0.0	chr2	135811602	135811722	(106381807)	+	AluJr	SINE/Alu	184	304	(8)	2109651
199	34.3	1.9	6.4	chr2	135811726	135811798	(106381731)	C	L2c	LINE/L2	(264)	3123	3052	2109652
1679	18.5	1.0	2.2	chr2	135811799	135812112	(106381417)	+	AluJo	SINE/Alu	1	310	(2)	2109653
183	22.2	0.0	0.0	chr2	136248020	136248055	(105945474)	+	MER5A	DNA/hAT-Charlie	154	189	(0)	2110392
22	11.8	0.0	4.9	chr2	136248467	136248507	(105945022)	+	(TG)n	Simple_repeat	1	41	(0)	2110393
1574	31.9	8.2	5.3	chr2	138506423	138507112	(103686417)	C	L2c	LINE/L2	(688)	2731	2010	2113528
370	33.5	10.9	5.2	chr2	140651624	140652263	(101541266)	+	L1M6	LINE/L1	582	1259	(5237)	2116384
12	30.9	1.6	1.6	chr2	144516844	144516904	(97676625)	+	(CCGCCC)n	Simple_repeat	1	62	(0)	2121494
19	22.7	4.5	4.3	chr2	144516939	144517027	(97676502)	+	G-rich	Low_complexity	1	93	(0)	2121495
15	0.0	0.0	0.0	chr2	144517172	144517190	(97676339)	+	(CGC)n	Simple_repeat	1	19	(0)	2121496
5375	23.4	7.0	2.1	chr2	144749577	144751635	(97441894)	+	L1ME1	LINE/L1	2286	4448	(2096)	2121816
2386	23.9	4.1	5.9	chr2	144751633	144751825	(97441704)	+	L1ME1	LINE/L1	5838	6042	(535)	2121816
34	0.0	0.0	0.0	chr2	144751826	144751857	(97441672)	+	(T)n	Simple_repeat	1	32	(0)	2121818
2386	23.9	4.1	5.9	chr2	144751858	144752389	(97441140)	+	L1ME1	LINE/L1	6043	6548	(29)	2121816
22631	3.1	0.2	0.1	chr2	146405742	146411341	(95782188)	+	L1PA2	LINE/L1	127	6155	(0)	2123879
43533	7.2	1.7	0.2	chr2	146543792	146549359	(95644170)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2124051
30442	10.2	1.1	0.1	chr2	146775208	146780811	(95412718)	+	HERVL-int	LTR/ERVL	1	5653	(1)	2124334
17	9.4	5.7	0.0	chr2	147844537	147844571	(94348958)	+	(GAGCCCG)n	Simple_repeat	1	37	(0)	2125792
36	19.1	3.3	1.1	chr2	147844582	147844672	(94348857)	+	(GCC)n	Simple_repeat	1	94	(0)	2125793
13	18.9	0.0	0.0	chr2	147844750	147844779	(94348750)	+	(GCC)n	Simple_repeat	1	30	(0)	2125794
14	9.0	4.9	7.0	chr2	147844870	147844910	(94348619)	+	(TTG)n	Simple_repeat	1	43	(0)	2125795
19	24.0	0.0	0.0	chr2	147844944	147844987	(94348542)	+	(TT)n	Simple_repeat	1	44	(0)	2125796
3226	9.7	4.7	3.2	chr2	148008440	148008942	(94184587)	+	LTR10F	LTR/ERV1	1	511	(0)	2126003
1763	13.6	12.2	13.4	chr2	148747950	148748383	(93445146)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2127088
242	21.9	4.5	0.0	chr2	149588088	149588151	(92605378)	+	L2b	LINE/L2	3303	3369	(6)	2128268
599	33.2	14.6	5.0	chr2	150034304	150034944	(92158585)	+	L1MEg	LINE/L1	166	878	(5364)	2128819
19	27.4	0.0	1.8	chr2	150487475	150487529	(91706000)	+	(AT)n	Simple_repeat	1	55	(0)	2129423
272	34.6	1.8	10.5	chr2	152202294	152202474	(89991055)	C	MER5A	DNA/hAT-Charlie	(21)	168	4	2132035
3483	9.3	0.8	4.7	chr2	152202477	152203008	(89990521)	+	LTR10F	LTR/ERV1	1	511	(0)	2132036
13	14.7	3.3	0.0	chr2	157628876	157628905	(84564624)	+	G-rich	Low_complexity	1	31	(0)	2138967
810	27.9	12.4	4.1	chr2	159723990	159724700	(82468829)	C	HAL1	LINE/L1	(741)	1766	988	2142040
472	31.2	5.7	3.5	chr2	160456486	160456744	(81736785)	C	Tigger15a	DNA/TcMar-Tigger	(121)	594	330	2143106
12	19.7	0.0	0.0	chr2	160456833	160456861	(81736668)	+	(AATTC)n	Simple_repeat	1	29	(0)	2143107
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
300	32.4	5.4	1.4	chr2	164870249	164870389	(77323140)	+	MIRb	SINE/MIR	104	250	(18)	2148908
2351	10.4	0.0	0.0	chr2	164870494	164870791	(77322738)	+	AluSg4	SINE/Alu	1	298	(12)	2148909
13	23.2	3.3	4.8	chr2	168532971	168533031	(73660498)	+	A-rich	Low_complexity	1	63	(0)	2153695
1017	9.1	0.5	0.6	chr2	168533124	168533310	(73660219)	C	L1P3	LINE/L1	(2360)	3786	3601	2153696
67	7.2	0.0	0.0	chr2	168533311	168533397	(73660132)	+	(TTGGAATAGA)n	Simple_repeat	1	87	(0)	2153697
1141	7.4	3.6	0.0	chr2	168533400	168533561	(73659968)	C	L1P3	LINE/L1	(1949)	4197	4030	2153698
8488	13.0	2.0	0.9	chr2	168533562	168535650	(73657879)	C	L1PA10	LINE/L1	(4367)	2116	4	2153699
16	13.4	0.0	2.9	chr2	168788275	168788309	(73405220)	+	(CTTTTT)n	Simple_repeat	1	35	(0)	2154069
327	27.4	13.8	1.9	chr2	169583866	169583973	(72609556)	+	MIRc	SINE/MIR	22	144	(124)	2155222
184	19.7	24.8	1.3	chr2	169584078	169584154	(72609375)	+	L2c	LINE/L2	3281	3381	(6)	2155223
2775	6.1	0.0	0.0	chr2	169721612	169721922	(72471607)	+	AluY	SINE/Alu	1	311	(0)	2155466
1592	18.8	2.7	11.4	chr2	169721923	169722209	(72471320)	+	MLT1A1	LTR/ERVL-MaLR	79	340	(68)	2155465
292	33.3	9.6	5.8	chr2	171152191	171152381	(71041148)	C	Tigger19b	DNA/TcMar-Tigger	(4)	546	348	2157897
22	3.2	3.1	0.0	chr2	171152510	171152541	(71040988)	+	(GTT)n	Simple_repeat	1	33	(0)	2157898
2077	20.6	8.3	2.2	chr2	171926725	171927223	(70266306)	+	L1MB8	LINE/L1	5578	6104	(74)	2159281
244	24.8	16.6	4.0	chr2	171927280	171927405	(70266124)	+	MIR	SINE/MIR	109	253	(9)	2159284
498	25.2	3.9	3.3	chr2	171927440	171927591	(70265938)	C	L1MC4	LINE/L1	(1098)	6944	6792	2159285
1878	14.0	2.4	0.7	chr2	171927592	171927883	(70265646)	C	AluSz6	SINE/Alu	(15)	297	1	2159286
3297	26.2	11.2	5.0	chr2	171935908	171936640	(70256889)	C	L2	LINE/L2	(2408)	1011	188	2159299
1573	14.7	0.0	0.0	chr2	171936958	171937182	(70256347)	C	AluJb	SINE/Alu	(15)	297	73	2159303
4031	19.5	12.6	6.6	chr2	172578230	172579605	(69613924)	C	L1MB7	LINE/L1	(6047)	1470	1	2160350
20	16.7	0.0	0.0	chr2	172931168	172931201	(69262328)	+	G-rich	Low_complexity	1	34	(0)	2160901
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
26401	2.5	0.1	0.0	chr2	173527290	173533317	(68660212)	C	L1PA3	LINE/L1	(0)	6155	127	2161822
5170	15.0	1.5	1.3	chr2	173533325	173534369	(68659160)	C	L1M2	LINE/L1	(2068)	4075	3029	2161821
806	19.7	7.2	0.7	chr2	173935099	173935240	(68258289)	+	FRAM	SINE/Alu	1	152	(24)	2162402
233	23.1	1.9	0.0	chr2	175766329	175766380	(66427149)	+	L2a	LINE/L2	3374	3426	(0)	2165195
876	31.0	11.3	2.5	chr2	176004613	176005356	(66188173)	C	L2b	LINE/L2	(208)	3167	2343	2165518
62	21.4	7.7	2.5	chr2	176106239	176106499	(66087030)	+	GA-rich	Low_complexity	1	281	(0)	2165663
20	16.4	5.9	4.2	chr2	176106847	176106915	(66086614)	+	(TCC)n	Simple_repeat	1	70	(0)	2165664
15	11.9	0.0	9.1	chr2	176106942	176106985	(66086544)	+	(GCGG)n	Simple_repeat	1	44	(0)	2165665
13	21.9	0.0	7.3	chr2	176106994	176107048	(66086481)	+	(GCGGCCA)n	Simple_repeat	1	55	(0)	2165666
5042	20.3	4.1	5.1	chr2	176408387	176409857	(65783672)	C	L1MD	LINE/L1	(2165)	3981	2526	2166082
204	27.3	11.3	5.7	chr2	177023517	177023659	(65169870)	+	MIR	SINE/MIR	23	174	(94)	2166968
2204	18.1	7.1	4.5	chr2	177774791	177775281	(64418248)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2168076
1120	28.8	12.5	2.0	chr2	177775282	177775338	(64418191)	+	L2a	LINE/L2	2477	2532	(887)	2168075
403	28.2	0.0	0.0	chr2	177775366	177775468	(64418061)	+	L2a	LINE/L2	2767	2869	(550)	2168075
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
2215	11.3	0.7	0.0	chr2	178188130	178188404	(64005125)	C	AluSx1	SINE/Alu	(35)	277	1	2168702
1352	26.4	6.6	4.3	chr2	178188464	178189264	(64004265)	+	L2a	LINE/L2	2598	3421	(5)	2168703
651	31.5	5.2	0.5	chr2	178522694	178522894	(63670635)	C	MIR	SINE/MIR	(0)	262	52	2169225
213	26.0	2.7	6.4	chr2	178523566	178523643	(63669886)	C	MIR3	SINE/MIR	(7)	201	127	2169226
4593	14.0	6.0	0.5	chr2	179460227	179461001	(62732528)	+	LTR8B	LTR/ERV1	1	820	(0)	2170205
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
25	26.4	0.0	4.4	chr2	181891943	181891962	(60301567)	+	(CCCTCC)n	Simple_repeat	2	90	(0)	2173263
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
25975	10.3	3.6	2.5	chr2	182390183	182392104	(59801425)	+	HERVL-int	LTR/ERVL	1	1894	(3760)	2173887
14	30.1	1.6	1.6	chr2	182716123	182716185	(59477344)	+	(CGCCAC)n	Simple_repeat	1	64	(0)	2174385
22480	11.8	3.8	4.5	chr2	185362073	185365423	(56828106)	C	HERVL-int	LTR/ERVL	(1835)	3819	474	2177692
22744	10.2	0.9	2.3	chr2	187532280	187538742	(54654787)	+	L1PA7	LINE/L1	2	6465	(4)	2180502
2320	11.0	0.0	2.2	chr2	190038889	190038901	(52154628)	C	AluSx	SINE/Alu	(1)	311	299	2183747
135	5.6	1.2	1.1	chr2	190038902	190039074	(52154455)	+	(TTC)n	Simple_repeat	1	175	(0)	2183748
2320	11.0	0.0	2.2	chr2	190039075	190039378	(52154151)	C	AluSx	SINE/Alu	(14)	298	1	2183747
399	32.2	4.5	0.0	chr2	191677452	191677600	(50515929)	+	MIR3	SINE/MIR	39	194	(14)	2186262
5399	16.9	6.5	2.0	chr2	192500207	192501137	(49692392)	+	LTR1D	LTR/ERV1	1	975	(0)	2187317
13	0.0	0.0	0.0	chr2	197804607	197804623	(44388906)	+	(GCC)n	Simple_repeat	1	17	(0)	2194616
220	38.2	4.2	2.4	chr2	198704815	198705023	(43488506)	C	L2b	LINE/L2	(633)	2786	2574	2195874
620	33.6	6.4	3.8	chr2	199992142	199992723	(42200806)	C	L2a	LINE/L2	(0)	3426	2818	2197664
650	28.6	12.7	4.5	chr2	199992730	199993147	(42200382)	C	L2a	LINE/L2	(1379)	2040	1584	2197664
2379	10.8	0.0	0.0	chr2	202197893	202198197	(39995332)	+	AluSq2	SINE/Alu	2	306	(7)	2201411
947	31.8	6.5	4.3	chr2	202198198	202198473	(39995056)	C	L2a	LINE/L2	(223)	3203	2917	2201409
2641	5.1	0.0	0.3	chr2	202343469	202343780	(39849749)	+	AluY	SINE/Alu	1	311	(0)	2201766
615	13.0	0.0	0.0	chr2	202343811	202343902	(39849627)	C	MSTA	LTR/ERVL-MaLR	(336)	92	1	2201767
214	31.2	5.9	1.8	chr2	202343975	202344088	(39849441)	C	MIRc	SINE/MIR	(130)	138	20	2201768
1318	18.3	4.6	2.9	chr2	202718303	202718646	(39474883)	C	L1MB1	LINE/L1	(2088)	4052	3703	2202571
5636	12.1	5.2	3.3	chr2	203009078	203009407	(39184122)	+	L1MCa	LINE/L1	3087	3431	(2890)	2203112
359	33.2	4.2	4.5	chr2	203009454	203009754	(39183775)	+	MamRep605	LTR?	258	561	(288)	2203123
2257	12.2	0.3	0.3	chr2	203009755	203010065	(39183464)	C	AluSz6	SINE/Alu	(0)	312	2	2203124
259	22.5	0.7	5.9	chr2	204443084	204443180	(37750349)	C	MLT1L	LTR/ERVL-MaLR	(340)	270	112	2205626
1659	14.4	0.0	0.7	chr2	204443367	204443660	(37749869)	+	L1MA8	LINE/L1	5996	6287	(4)	2205627
9869	19.8	6.2	6.7	chr2	205838190	205839737	(36353792)	+	L1MB4	LINE/L1	2793	4418	(2588)	2207470
447	27.7	2.0	2.0	chr2	205902223	205902373	(36291156)	+	MER134	DNA?	20	170	(343)	2207594
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
30	3.1	0.0	0.0	chr2	207530383	207530415	(34663114)	+	(GGCGGCG)n	Simple_repeat	1	33	(0)	2210182
4206	16.1	10.1	1.2	chr2	208033828	208034573	(34158956)	+	LTR8B	LTR/ERV1	1	820	(0)	2211172
1062	18.8	7.5	3.9	chr2	210712615	210712924	(31480605)	C	L1MA8	LINE/L1	(4)	6287	5966	2214674
1316	23.5	0.9	1.9	chr2	210712922	210713246	(31480283)	C	L1M4b	LINE/L1	(5725)	1142	821	2214673
2210	28.6	8.0	1.6	chr2	210713251	210713885	(31479644)	C	L1M4b	LINE/L1	(6179)	688	10	2214673
12	16.5	5.9	0.0	chr2	216283771	216283804	(25909725)	+	(GTGG)n	Simple_repeat	1	36	(0)	2222460
579	30.9	3.7	9.8	chr2	218185725	218186195	(24007334)	+	L2a	LINE/L2	2976	3417	(9)	2225590
1782	15.1	4.4	2.8	chr2	218246689	218246979	(23946550)	+	AluSz	SINE/Alu	1	296	(16)	2225716
1758	17.8	2.7	0.7	chr2	218246980	218247134	(23946395)	+	AluJb	SINE/Alu	138	292	(20)	2225715
421	26.0	36.9	2.9	chr2	218722604	218722877	(23470652)	C	L2a	LINE/L2	(452)	2967	2597	2226703
13	22.1	0.0	4.3	chr2	219046174	219046219	(23147310)	+	(CCTTCCT)n	Simple_repeat	1	46	(0)	2227255
472	34.1	5.0	2.0	chr2	219046277	219046530	(23146999)	+	MIR	SINE/MIR	1	262	(0)	2227256
13	16.2	4.4	4.3	chr2	219160852	219160896	(23032633)	+	G-rich	Low_complexity	1	47	(0)	2227435
184	25.0	13.6	8.4	chr2	219160993	219161158	(23032371)	+	MIR3	SINE/MIR	10	185	(23)	2227436
299	34.7	7.6	3.2	chr2	219161197	219161634	(23031895)	+	L2c	LINE/L2	2913	3371	(16)	2227437
1588	25.4	12.8	10.9	chr2	219376516	219376991	(22816538)	+	L1MC5a	LINE/L1	1695	2148	(629)	2227822
244	30.3	10.9	1.6	chr2	219433815	219433938	(22759591)	+	MER5A	DNA/hAT-Charlie	4	140	(49)	2227946
312	31.1	12.1	4.1	chr2	219433956	219434290	(22759239)	+	L2c	LINE/L2	2767	3132	(255)	2227947
23966	6.2	0.4	0.2	chr2	222584378	222590526	(19603003)	+	L1PA5	LINE/L1	6	6154	(0)	2232815
2811	19.4	2.7	2.4	chr2	222678267	222678658	(19514871)	C	L1ME1	LINE/L1	(704)	5475	5083	2232962
1712	8.9	0.0	3.4	chr2	222709094	222709328	(19484201)	+	AluSz6	SINE/Alu	64	290	(22)	2233032
14	21.2	4.6	4.4	chr2	222860758	222860822	(19332707)	+	(CCCGCT)n	Simple_repeat	1	68	(0)	2233361
12	15.5	3.5	0.0	chr2	222860880	222860908	(19332621)	+	(CGCGC)n	Simple_repeat	1	30	(0)	2233362
2047	15.8	1.3	1.3	chr2	223076319	223076696	(19116833)	+	MLT1B	LTR/ERVL-MaLR	5	382	(8)	2233691
2130	16.9	2.2	0.0	chr2	223076972	223077327	(19116202)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2233692
2037	10.5	4.1	6.6	chr2	223405253	223405600	(18787929)	+	THE1D	LTR/ERVL-MaLR	3	341	(40)	2234164
23	14.6	0.0	0.0	chr2	227234178	227234215	(14959314)	+	(GA)n	Simple_repeat	1	38	(0)	2240126
2203	11.5	0.0	7.9	chr2	227465909	227466238	(14727291)	+	AluSz6	SINE/Alu	2	305	(7)	2240561
768	22.3	9.6	12.9	chr2	227466239	227466306	(14727223)	+	MamRep4096	DNA/hAT-Tip100	360	417	(9)	2240560
1434	13.8	0.8	0.4	chr2	228048503	228048742	(14144787)	+	Tigger3a	DNA/TcMar-Tigger	1	241	(107)	2241552
620	13.2	4.2	0.0	chr2	228048743	228048878	(14144651)	C	L1P5	LINE/L1	(744)	5412	5271	2241553
440	23.5	3.0	0.0	chr2	228048879	228048976	(14144553)	+	Tigger3d	DNA/TcMar-Tigger	221	321	(0)	2241554
459	29.5	13.6	0.2	chr2	228048998	228049202	(14144327)	+	MIR	SINE/MIR	20	249	(13)	2241555
4276	6.1	2.5	0.9	chr2	230655603	230655716	(11537813)	+	MER41A	LTR/ERV1	437	554	(0)	2245453
224	29.7	16.2	2.4	chr2	230656108	230656314	(11537215)	C	L2b	LINE/L2	(23)	3352	3112	2245455
208	26.2	1.6	0.0	chr2	231052833	231052893	(11140636)	C	MIRb	SINE/MIR	(186)	82	21	2246150
2074	25.1	9.0	8.1	chr2	231863491	231864362	(10329167)	C	L1MC5	LINE/L1	(770)	8534	8192	2247784
1274	28.5	4.6	12.1	chr2	232988308	232989165	(9204364)	+	L1ME4b	LINE/L1	67	855	(37)	2249675
86	8.4	2.8	3.3	chr2	233176296	233176474	(9017055)	+	(ATGG)n	Simple_repeat	1	184	(0)	2250042
114	26.7	2.9	2.1	chr2	233176478	233176521	(9017008)	+	(TGGA)n	Simple_repeat	1	43	(0)	2250043
26	0.0	0.0	0.0	chr2	233176522	233176546	(9016983)	+	(GAT)n	Simple_repeat	1	25	(0)	2250044
598	26.6	8.2	3.3	chr2	234539626	234539925	(7653604)	C	L2a	LINE/L2	(162)	3264	2949	2252140
604	26.4	1.1	1.7	chr2	234539934	234540110	(7653419)	C	L2	LINE/L2	(432)	2987	2812	2252141
429	35.4	9.7	0.0	chr2	234540166	234540360	(7653169)	C	MIR	SINE/MIR	(8)	254	39	2252142
1099	24.2	3.2	8.2	chr2	235584350	235584749	(6608780)	+	MLT1B	LTR/ERVL-MaLR	1	379	(11)	2253854
439	29.7	3.3	4.7	chr2	235820933	235821224	(6372305)	+	L1ME4c	LINE/L1	277	505	(325)	2254158
1279	4.8	0.0	0.0	chr2	235821383	235821527	(6372002)	C	AluYc	SINE/Alu	(11)	288	144	2254159
989	19.1	3.4	7.4	chr2	236143952	236144166	(6049363)	+	MER63A	DNA/hAT-Blackjack	1	206	(4)	2254580
288	32.1	0.9	2.6	chr2	236144575	236144689	(6048840)	C	MIR	SINE/MIR	(98)	164	52	2254581
10837	15.5	6.4	1.1	chr2	237106888	237109366	(5084163)	+	L1MA8	LINE/L1	3532	6173	(118)	2255959
380	19.9	1.4	0.0	chr2	237109353	237109433	(5084096)	+	L1MC4	LINE/L1	6750	6819	(1223)	2255957
2636	28.0	12.8	4.5	chr2	237109429	237111329	(5082200)	+	L1MEc	LINE/L1	31	2112	(4288)	2255960
215	33.3	2.2	2.2	chr2	237421535	237421623	(4771906)	C	L2a	LINE/L2	(1)	3425	3337	2256323
241	27.8	8.5	2.7	chr2	237421795	237421905	(4771624)	+	HAL1	LINE/L1	276	393	(2114)	2256324
647	26.9	1.2	0.6	chr2	237516754	237518473	(4675056)	+	(GATG)n	Simple_repeat	1	1740	(0)	2256471
77	2.5	1.2	1.2	chr2	237917834	237917918	(4275611)	+	(AGAT)n	Simple_repeat	1	86	(0)	2257042
763	23.9	6.2	0.0	chr2	237917919	237918132	(4275397)	+	L1M5	LINE/L1	5553	5781	(343)	2257040
2029	10.6	0.0	3.5	chr2	237918269	237918579	(4274950)	C	AluSz	SINE/Alu	(11)	301	2	2257043
10629	17.7	5.0	3.9	chr2	238071891	238073662	(4119867)	C	L1MB7	LINE/L1	(46)	6998	5190	2257328
49	2.1	0.0	0.0	chr2	238125768	238125816	(4067713)	+	(TGGAG)n	Simple_repeat	1	49	(0)	2257394
384	23.9	4.1	1.9	chr2	238125960	238127216	(4066313)	+	(TCTGTG)n	Simple_repeat	1	1309	(0)	2257395
813	32.5	13.6	6.3	chr2	238235131	238236093	(3957436)	C	L2	LINE/L2	(773)	2646	1566	2257543
237	33.6	5.4	2.1	chr2	239754519	239754661	(2438868)	+	L2a	LINE/L2	3279	3426	(0)	2259287
367	29.7	1.6	1.4	chr2	239754667	239755852	(2437677)	+	(GATG)n	Simple_repeat	1	1205	(0)	2259288
2293	6.8	5.2	1.0	chr2	241299239	241299534	(893995)	+	AluSx4	SINE/Alu	1	309	(1)	2260941
2333	9.7	0.0	0.0	chr2	241299634	241299932	(893597)	+	AluY	SINE/Alu	1	299	(12)	2260942
3585	18.1	10.2	0.1	chr2	241575041	241575873	(617656)	+	ERVL-B4-int	LTR/ERVL	344	1269	(4445)	2261364
1966	23.1	0.2	0.1	chr20	63841	67292	(64376875)	+	(ATTCC)n	Simple_repeat	2	3456	(0)	2262202
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
2378	9.5	0.3	0.3	chr20	369376	369680	(64074487)	+	AluSx	SINE/Alu	1	305	(7)	2262782
2004	25.6	11.6	3.1	chr20	369681	370095	(64074072)	+	L2a	LINE/L2	2813	3292	(134)	2262777
837	26.0	6.8	5.2	chr20	383740	383810	(64060357)	C	L1ME4b	LINE/L1	(544)	348	280	2262818
270	32.1	12.1	5.2	chr20	383934	384287	(64059880)	+	L2c	LINE/L2	2500	2895	(524)	2262820
1357	26.4	11.1	2.4	chr20	384288	384356	(64059811)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	448	2262821
1192	29.1	12.5	1.7	chr20	406838	407578	(64036589)	C	L2a	LINE/L2	(0)	3426	2581	2262879
245	32.2	11.9	1.7	chr20	407651	407824	(64036343)	+	MIRb	SINE/MIR	3	196	(72)	2262880
64914	4.8	0.4	0.9	chr20	799462	800388	(63643779)	+	HERVIP10F-int	LTR/ERV1	6815	7737	(0)	2263759
3736	6.1	0.4	8.6	chr20	800389	800945	(63643222)	+	LTR10F	LTR/ERV1	1	511	(0)	2263759
373	12.9	18.3	4.5	chr20	800946	801034	(63643133)	+	LTR1A1	LTR/ERV1	166	269	(549)	2263758
277	17.1	6.2	5.0	chr20	801017	801096	(63643071)	+	LTR1A1	LTR/ERV1	207	287	(485)	2263758
1264	18.2	4.7	1.3	chr20	801091	801385	(63642782)	+	LTR1A1	LTR/ERV1	385	742	(0)	2263758
368	28.9	10.4	4.8	chr20	1019242	1019430	(63424737)	C	MIRc	SINE/MIR	(60)	208	8	2264255
125	29.3	4.3	1.6	chr20	1019433	1019965	(63424202)	+	(CCAT)n	Simple_repeat	1	556	(0)	2264256
678	21.8	4.4	6.6	chr20	1118101	1118311	(63325856)	+	MIR	SINE/MIR	35	240	(22)	2264467
18	21.0	3.5	1.7	chr20	1894251	1894308	(62549859)	+	(CCCCCCG)n	Simple_repeat	1	59	(0)	2265847
2135	11.8	1.3	0.7	chr20	2681578	2681873	(61762294)	C	AluSq2	SINE/Alu	(15)	298	1	2267419
1756	16.3	0.3	6.8	chr20	2681874	2682068	(61762099)	+	AluJb	SINE/Alu	126	305	(7)	2267418
197	11.9	0.3	1.3	chr20	2682072	2682387	(61761780)	+	(AGAAGA)n	Simple_repeat	1	317	(0)	2267420
562	22.9	6.0	1.9	chr20	2682478	2682637	(61761530)	+	MER63A	DNA/hAT-Blackjack	1	167	(43)	2267421
7427	3.9	0.5	0.0	chr20	2682648	2683587	(61760580)	C	L1PA5	LINE/L1	(1362)	4784	3840	2267422
183	26.0	4.0	2.7	chr20	2688576	2688650	(61755517)	+	L2c	LINE/L2	3271	3346	(41)	2267435
20	26.4	3.3	3.2	chr20	3046631	3046721	(61397446)	+	(AGCAGG)n	Simple_repeat	1	94	(0)	2268077
1894	7.4	4.9	0.0	chr20	3047119	3047387	(61396780)	+	AluSz	SINE/Alu	1	283	(29)	2268078
2358	7.5	0.7	0.0	chr20	3408986	3409280	(61034887)	C	AluSx1	SINE/Alu	(15)	297	1	2268794
621	31.4	2.5	4.3	chr20	3727063	3727385	(60716782)	C	LTR103_Mam	LTR/ERV1?	(111)	364	48	2269389
407	27.5	2.4	3.6	chr20	3727427	3727592	(60716575)	+	L2c	LINE/L2	2254	2417	(1002)	2269390
2317	9.1	0.7	0.3	chr20	3795080	3795388	(60648779)	+	AluSx4	SINE/Alu	1	310	(0)	2269515
316	27.3	4.1	1.7	chr20	3795777	3795894	(60648273)	+	MIR	SINE/MIR	35	152	(116)	2269516
235	5.5	0.4	0.0	chr20	4118533	4118800	(60325367)	+	(TTC)n	Simple_repeat	1	269	(0)	2270166
13	24.0	0.0	0.0	chr20	6006258	6006296	(58437871)	+	(GCGCGCG)n	Simple_repeat	1	39	(0)	2273691
747	28.7	15.9	1.5	chr20	8454199	8454629	(55989538)	C	L2a	LINE/L2	(384)	3035	2524	2277287
898	25.2	10.4	4.4	chr20	8454653	8454993	(55989174)	+	L2a	LINE/L2	3063	3426	(0)	2277289
24	27.4	2.1	3.1	chr20	10673536	10673629	(53770538)	+	(CGC)n	Simple_repeat	1	96	(0)	2280873
2592	4.3	1.3	0.7	chr20	14146041	14146343	(50297824)	+	AluY	SINE/Alu	1	305	(6)	2286006
226	23.7	19.2	3.3	chr20	14146857	14146978	(50297189)	C	MER5A	DNA/hAT-Charlie	(0)	189	44	2286007
26	6.3	0.0	0.0	chr20	17696947	17696980	(46747187)	+	(TGA)n	Simple_repeat	1	34	(0)	2291292
21	0.0	0.0	0.0	chr20	23975873	23975895	(40468272)	+	(T)n	Simple_repeat	1	23	(0)	2300338
4532	21.3	4.9	2.9	chr20	25726429	25726848	(38717319)	C	L1PB4	LINE/L1	(4709)	2857	2443	2302624
2361	17.6	4.2	0.2	chr20	25726849	25727259	(38716908)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2302627
4532	21.3	4.9	2.9	chr20	25727260	25727398	(38716769)	C	L1PB4	LINE/L1	(5124)	2442	2292	2302624
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
568	20.5	1.0	1.0	chr20	32613215	32614432	(31829735)	+	(GATG)n	Simple_repeat	1	1230	(0)	2308822
474	33.4	12.6	4.3	chr20	32614526	32615245	(31828922)	+	L2b	LINE/L2	2566	3363	(12)	2308823
173	19.8	0.3	0.3	chr20	33074615	33074958	(31369209)	+	(CATC)n	Simple_repeat	1	345	(0)	2309884
233	17.6	3.8	0.0	chr20	33075037	33075087	(31369080)	C	L2c	LINE/L2	(1)	3386	3334	2309885
243	30.3	5.7	2.9	chr20	33334003	33334104	(31110063)	C	MIRc	SINE/MIR	(22)	246	142	2310451
198	13.8	3.8	1.7	chr20	33334125	33334524	(31109643)	+	(GATG)n	Simple_repeat	1	415	(0)	2310452
275	23.8	14.4	6.0	chr20	33334621	33334803	(31109364)	+	MamRep434	DNA/TcMar-Tigger	196	396	(30)	2310453
323	23.7	4.1	11.9	chr20	35539508	35539641	(28904526)	+	L1MCa	LINE/L1	1854	1976	(4532)	2315514
19	0.0	4.2	0.0	chr20	35539644	35539667	(28904500)	+	(TA)n	Simple_repeat	1	25	(0)	2315515
1303	13.7	2.8	12.5	chr20	35539685	35539744	(28904423)	C	AluJr4	SINE/Alu	(30)	282	224	2315516
2255	10.7	10.8	8.3	chr20	35539745	35540213	(28903954)	+	MER51E	LTR/ERV1	1	482	(0)	2315517
280	26.2	6.2	6.2	chr20	36465309	36465487	(27978680)	C	MIRc	SINE/MIR	(71)	197	19	2317694
348	22.4	7.8	10.1	chr20	36866443	36866486	(27577681)	C	MIRb	SINE/MIR	(60)	148	99	2318645
1863	21.5	11.4	8.1	chr20	36866487	36867042	(27577125)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	2318646
202	31.2	20.9	1.8	chr20	37193633	37194255	(27249912)	C	L2b	LINE/L2	(830)	2589	1816	2319472
28	0.0	0.0	0.0	chr20	37194256	37194281	(27249886)	+	(TTG)n	Simple_repeat	1	26	(0)	2319475
2261	8.3	0.0	0.0	chr20	37194286	37194561	(27249606)	C	AluSq2	SINE/Alu	(37)	276	1	2319476
235	36.6	5.7	10.2	chr20	37251414	37251708	(27192459)	+	L2b	LINE/L2	3069	3349	(26)	2319576
536	32.6	6.2	2.6	chr20	37352043	37352275	(27091892)	+	MIR	SINE/MIR	5	246	(16)	2319824
175	24.4	0.7	1.4	chr20	37430047	37430475	(27013692)	+	(TCCA)n	Simple_repeat	1	432	(0)	2320022
41	0.0	0.0	0.0	chr20	37430683	37430717	(27013450)	+	(TG)n	Simple_repeat	1	35	(0)	2320023
1354	30.9	8.2	5.8	chr20	38043014	38043998	(26400169)	C	L2a	LINE/L2	(5)	3421	2312	2321310
2277	20.0	9.1	4.1	chr20	38044004	38044372	(26399795)	C	MER68	LTR/ERVL	(2)	561	182	2321311
339	30.0	18.4	3.3	chr20	41309710	41310398	(23133769)	+	L2	LINE/L2	697	1512	(1907)	2327340
8926	14.5	4.5	1.6	chr20	42495848	42497454	(21946713)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	1062	2329382
598	34.0	10.3	8.4	chr20	43503402	43503629	(20940538)	C	L1MEd	LINE/L1	(6751)	335	107	2331324
2388	9.0	0.0	0.3	chr20	43503632	43503930	(20940237)	C	AluY	SINE/Alu	(13)	298	1	2331326
374	22.5	14.7	1.3	chr20	44217682	44217834	(20226333)	+	L1ME3A	LINE/L1	5995	6171	(2)	2332930
14	13.9	2.2	6.5	chr20	44885524	44885568	(19558599)	+	(CCCTGC)n	Simple_repeat	1	46	(0)	2334594
33	26.3	0.0	0.0	chr20	44885718	44885803	(19558364)	+	(CCG)n	Simple_repeat	1	86	(0)	2334595
2332	8.2	0.3	0.0	chr20	45910342	45910633	(18533534)	+	AluSz	SINE/Alu	9	301	(11)	2336528
513	25.3	3.0	8.0	chr20	46041114	46041289	(18402878)	+	MER5B	DNA/hAT-Charlie	1	167	(11)	2336838
51	0.0	0.0	0.0	chr20	46411196	46411239	(18032928)	+	(GT)n	Simple_repeat	1	44	(0)	2337619
281	19.2	0.5	2.3	chr20	46724389	46724995	(17719172)	+	(GATG)n	Simple_repeat	1	610	(0)	2338319
14	14.3	8.3	1.9	chr20	46725302	46725349	(17718818)	+	(GCCTGG)n	Simple_repeat	1	52	(0)	2338320
882	27.3	11.6	2.0	chr20	47500404	47500991	(16943176)	C	L2a	LINE/L2	(141)	3285	2635	2340293
1080	28.3	3.0	2.5	chr20	47501131	47501489	(16942678)	C	L1MC4	LINE/L1	(460)	7582	7222	2340294
239	35.3	3.5	0.7	chr20	47815150	47815286	(16628881)	C	L2a	LINE/L2	(555)	2864	2724	2340892
287	31.1	3.6	1.9	chr20	47966539	47966646	(16477521)	+	MIR3	SINE/MIR	78	187	(21)	2341202
296	26.3	7.1	0.8	chr20	47967132	47967250	(16476917)	C	MLT1K	LTR/ERVL-MaLR	(343)	252	126	2341203
251	33.3	10.9	4.0	chr20	48388227	48388473	(16055694)	+	MLT1K	LTR/ERVL-MaLR	342	607	(3)	2342002
286	29.3	3.9	2.0	chr20	48388594	48388694	(16055473)	C	MIR3	SINE/MIR	(21)	187	85	2342003
238	26.1	1.1	10.7	chr20	48449455	48449557	(15994610)	C	L2c	LINE/L2	(7)	3380	3288	2342127
400	29.5	8.5	3.3	chr20	48449630	48449747	(15994420)	+	MER112	DNA/hAT-Charlie	1	125	(136)	2342128
453	4.2	7.2	0.0	chr20	48449748	48450431	(15993736)	+	(GATGG)n	Simple_repeat	1	733	(0)	2342129
2041	11.6	1.0	1.0	chr20	48920897	48921198	(15522969)	C	AluJo	SINE/Alu	(10)	302	1	2343218
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
185	20.0	2.4	0.0	chr20	49181280	49181319	(15262848)	+	MIR	SINE/MIR	222	262	(0)	2343759
2173	12.9	0.6	0.3	chr20	49181483	49181793	(15262374)	+	AluSx	SINE/Alu	1	312	(0)	2343760
28	14.9	5.5	5.2	chr20	49188641	49188731	(15255436)	+	(CCTT)n	Simple_repeat	1	96	(0)	2343773
608	27.1	5.9	0.6	chr20	49188743	49188902	(15255265)	C	L2a	LINE/L2	(1)	3425	3257	2343774
2290	11.2	0.0	0.3	chr20	49209767	49210078	(15234089)	+	AluSc8	SINE/Alu	1	311	(0)	2343846
313	24.1	0.0	0.0	chr20	49210172	49210250	(15233917)	C	HAL1	LINE/L1	(710)	1797	1719	2343847
502	18.8	3.0	0.0	chr20	49210279	49210374	(15233793)	C	HAL1	LINE/L1	(852)	1655	1557	2343847
16	20.6	0.0	4.4	chr20	49210450	49210494	(15233673)	+	(TCC)n	Simple_repeat	1	45	(0)	2343848
71	8.1	2.4	1.6	chr20	49430402	49430524	(15013643)	+	(TCCA)n	Simple_repeat	1	126	(0)	2344398
701	34.6	1.1	5.0	chr20	49430673	49430955	(15013212)	C	L2b	LINE/L2	(0)	3375	3104	2344399
65	48.1	0.8	1.2	chr20	49591963	49592317	(14851850)	+	(TCAT)n	Simple_repeat	1	355	(0)	2344825
51	7.7	0.0	0.0	chr20	49592318	49592386	(14851781)	+	(CCAT)n	Simple_repeat	1	69	(0)	2344826
65	48.1	0.8	1.2	chr20	49592387	49592528	(14851639)	+	(TCAT)n	Simple_repeat	4	143	(0)	2344827
11	10.3	2.7	7.9	chr20	49592608	49592644	(14851523)	+	(CCTCTT)n	Simple_repeat	1	38	(0)	2344828
1286	27.9	10.8	3.9	chr20	49618440	49619067	(14825100)	+	L2a	LINE/L2	2748	3426	(0)	2344906
528	11.4	1.1	3.7	chr20	49619068	49620028	(14824139)	+	(GGAT)n	Simple_repeat	1	972	(0)	2344908
259	25.0	5.4	1.1	chr20	49706230	49706318	(14737849)	C	MIRb	SINE/MIR	(31)	237	145	2345086
1275	14.2	3.7	4.1	chr20	50165637	50165856	(14278311)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2346247
22	12.6	4.4	0.0	chr20	50166362	50166406	(14277761)	+	(CTTCT)n	Simple_repeat	1	47	(0)	2346248
1578	15.4	5.4	10.2	chr20	50166407	50166714	(14277453)	C	L1MB3	LINE/L1	(328)	5855	5547	2346249
123	30.9	1.2	0.9	chr20	50322647	50323067	(14121100)	+	(CCAT)n	Simple_repeat	1	426	(0)	2346638
1716	17.7	0.4	0.0	chr20	50458692	50458956	(13985211)	+	AluJb	SINE/Alu	1	266	(46)	2346991
20	4.2	0.0	0.0	chr20	50458963	50458987	(13985180)	+	(AC)n	Simple_repeat	1	25	(0)	2346992
281	17.7	1.8	0.2	chr20	50459077	50459625	(13984542)	+	(ATGG)n	Simple_repeat	1	559	(0)	2346993
14	28.9	0.0	0.0	chr20	50459627	50459672	(13984495)	+	A-rich	Low_complexity	1	46	(0)	2346994
1106	23.2	2.8	6.9	chr20	50649999	50650310	(13793857)	C	MLT1A0	LTR/ERVL-MaLR	(23)	444	46	2347376
1875	16.7	0.3	1.0	chr20	50650311	50650603	(13793564)	C	AluSz	SINE/Alu	(21)	291	1	2347377
1011	24.9	12.8	5.1	chr20	51221269	51222061	(13222106)	C	L2a	LINE/L2	(2)	3424	2567	2348686
409	25.8	7.8	7.8	chr20	51545254	51545446	(12898721)	+	MLT1K	LTR/ERVL-MaLR	3	195	(400)	2349354
189	19.6	3.0	0.5	chr20	51545511	51545938	(12898229)	+	(ATGG)n	Simple_repeat	1	441	(0)	2349355
2342	24.3	11.5	4.8	chr20	52883933	52885850	(11558317)	C	L1ME4a	LINE/L1	(3589)	2730	672	2352361
46	19.3	0.7	0.0	chr20	52972406	52972558	(11471609)	+	(TG)n	Simple_repeat	1	154	(0)	2352542
57	13.9	1.0	0.0	chr20	52972696	52972792	(11471375)	+	(GAG)n	Simple_repeat	1	98	(0)	2352543
210	25.0	4.2	5.6	chr20	53010176	53010247	(11433920)	+	MER5A	DNA/hAT-Charlie	114	184	(5)	2352613
12	7.4	10.3	0.0	chr20	53010394	53010422	(11433745)	+	(CAA)n	Simple_repeat	1	32	(0)	2352614
185	19.1	6.0	16.0	chr20	53611715	53611789	(10832378)	C	AmnSINE1	SINE/5S-Deu-L2	(414)	161	95	2353857
28	27.0	1.2	0.0	chr20	53611873	53611954	(10832213)	+	(TTTAT)n	Simple_repeat	1	83	(0)	2353858
1584	5.5	3.9	0.5	chr20	53918642	53918840	(10525327)	+	AluSx	SINE/Alu	107	312	(0)	2354667
331	29.8	5.5	4.2	chr20	54102863	54103076	(10341091)	C	MER103C	DNA/hAT-Charlie	(79)	218	2	2355049
35	14.6	1.4	1.4	chr20	54103200	54103269	(10340898)	+	(AATT)n	Simple_repeat	1	71	(0)	2355050
355	23.9	13.7	4.1	chr20	56359556	56359825	(8084342)	+	MER113	DNA/hAT-Charlie	176	475	(46)	2358878
195	34.7	6.0	4.5	chr20	56359877	56360060	(8084107)	+	MIRb	SINE/MIR	32	227	(41)	2358879
13	18.3	5.4	0.0	chr20	56925242	56925278	(7518889)	+	(GCG)n	Simple_repeat	1	39	(0)	2360189
418	25.7	4.9	0.0	chr20	57473551	57473686	(6970481)	C	MER5B	DNA/hAT-Charlie	(29)	149	7	2361264
731	31.4	1.2	0.0	chr20	57473775	57474039	(6970128)	C	MER102c	DNA/hAT-Charlie	(5)	326	78	2361265
13	31.2	0.0	4.2	chr20	58892524	58892595	(5551572)	+	G-rich	Low_complexity	1	72	(0)	2363592
50	19.6	2.6	0.0	chr20	59767777	59767892	(4676275)	+	(TTTCC)n	Simple_repeat	1	119	(0)	2365011
21	28.8	1.1	3.3	chr20	59767907	59767995	(4676172)	+	(TCTC)n	Simple_repeat	1	90	(0)	2365012
392	21.5	0.0	0.0	chr20	60314268	60314332	(4129835)	+	AluJb	SINE/Alu	134	198	(104)	2365796
61	0.0	1.7	0.0	chr20	60314416	60314473	(4129694)	+	(TCCT)n	Simple_repeat	1	59	(0)	2365797
36	35.1	1.9	4.1	chr20	62776953	62777214	(1666953)	+	G-rich	Low_complexity	1	267	(0)	2368932
726	17.7	1.0	0.6	chr20	63491620	63493004	(951163)	+	(GGAT)n	Simple_repeat	1	1399	(0)	2369618
243	11.4	0.0	0.0	chr20	63693421	63693781	(750386)	+	(CCA)n	Simple_repeat	1	361	(0)	2369894
250	31.1	0.0	8.5	chr20	63892598	63892727	(551440)	C	L2c	LINE/L2	(1)	3386	3268	2370190
293	28.0	13.1	0.0	chr20	63892834	63892926	(551241)	+	MIRb	SINE/MIR	123	229	(39)	2370191
1142	23.0	0.4	0.2	chr21	5327288	5328868	(41381115)	+	(TGGAA)n	Simple_repeat	1	1581	(0)	2371008
1142	23.0	0.4	0.2	chr21	5328933	5329957	(41380026)	+	(TGGAA)n	Simple_repeat	2	1031	(0)	2371010
10927	3.9	0.1	0.7	chr21	5329982	5331757	(41378226)	C	L1HS	LINE/L1	(3478)	2668	905	2371011
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
15708	0.1	0.0	0.0	chr21	8436876	8438744	(38271239)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373613
13	8.1	3.6	3.5	chr21	8438766	8438793	(38271190)	+	(CCG)n	Simple_repeat	1	29	(0)	2373614
12	18.8	2.6	2.6	chr21	8438825	8438862	(38271121)	+	(CGCGTG)n	Simple_repeat	1	39	(0)	2373615
16	8.3	0.0	0.0	chr21	8438857	8438882	(38271101)	+	(CGTT)n	Simple_repeat	1	26	(0)	2373616
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1191	25.7	7.6	1.6	chr21	14046600	14046971	(32663012)	+	L1MCa	LINE/L1	689	1084	(5338)	2377284
1092	12.5	0.7	0.0	chr21	14046975	14047126	(32662857)	+	AluSp	SINE/Alu	138	290	(23)	2377285
46	6.5	0.0	2.9	chr21	14047139	14047207	(32662776)	+	(GAGTG)n	Simple_repeat	1	69	(0)	2377286
2348	21.5	5.2	3.3	chr21	14047210	14047543	(32662440)	+	L1MCa	LINE/L1	1095	1526	(5602)	2377284
504	17.2	0.0	1.1	chr21	17454673	17454759	(29255224)	C	AluSp	SINE/Alu	(13)	300	215	2381627
591	4.0	0.0	0.0	chr21	17454786	17454859	(29255124)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	2381628
1887	13.6	0.0	4.2	chr21	17454974	17455283	(29254700)	+	AluJo	SINE/Alu	1	297	(15)	2381629
2782	22.6	2.6	1.7	chr21	23449487	23449886	(23260097)	+	MER6	DNA/TcMar-Tigger	5	411	(454)	2389656
2887	9.2	4.4	4.8	chr21	23449887	23450341	(23259642)	+	MLT2A2	LTR/ERVL	1	453	(0)	2389657
211	27.4	1.6	0.0	chr21	29074154	29074215	(17635768)	C	MIRb	SINE/MIR	(19)	249	187	2397697
1915	22.4	7.2	6.1	chr21	29278944	29279440	(17430543)	+	L1ME2	LINE/L1	5614	6148	(14)	2398058
2248	25.1	6.5	3.3	chr21	29279454	29280395	(17429588)	+	L1ME3	LINE/L1	5185	6159	(3)	2398062
18	14.7	4.3	2.0	chr21	31344320	31344366	(15365617)	+	(CCTC)n	Simple_repeat	1	49	(0)	2401151
366	30.6	2.0	2.7	chr21	31403808	31403955	(15306028)	C	L2c	LINE/L2	(59)	3328	3182	2401268
340	26.5	3.8	3.8	chr21	31479233	31479338	(15230645)	+	MIR3	SINE/MIR	98	203	(5)	2401430
72	11.1	0.8	0.8	chr21	31479358	31479487	(15230496)	+	(TGGA)n	Simple_repeat	1	131	(0)	2401431
542	26.4	8.1	1.5	chr21	31479493	31479688	(15230295)	+	MER63A	DNA/hAT-Blackjack	1	210	(0)	2401432
1002	32.4	7.4	4.2	chr21	31781528	31782366	(14927617)	+	L2b	LINE/L2	2334	3248	(139)	2402074
12	16.6	4.5	4.3	chr21	31872932	31872975	(14837008)	+	(CTCCGCCA)n	Simple_repeat	1	46	(0)	2402248
13	14.9	3.3	0.0	chr21	31873244	31873273	(14836710)	+	(CGG)n	Simple_repeat	1	31	(0)	2402249
354	24.0	6.8	0.0	chr21	33490825	33490920	(13219063)	C	MIR3	SINE/MIR	(28)	180	78	2405098
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
2285	9.6	0.0	4.3	chr21	33649735	33650058	(13059925)	+	AluSg	SINE/Alu	1	310	(0)	2405376
21	13.2	0.0	0.0	chr21	33650396	33650428	(13059555)	+	(TG)n	Simple_repeat	1	33	(0)	2405377
278	29.2	0.9	0.0	chr21	33650993	33651105	(13058878)	+	L2a	LINE/L2	3302	3415	(11)	2405378
263	30.6	2.9	4.3	chr21	33651225	33651364	(13058619)	C	L2	LINE/L2	(532)	2887	2750	2405379
2492	6.3	1.0	0.0	chr21	33708383	33708685	(13001298)	C	AluSp	SINE/Alu	(7)	306	1	2405498
4910	23.9	8.3	3.5	chr21	33708686	33709338	(13000645)	C	L1ME1	LINE/L1	(1012)	5134	4437	2405497
16	0.0	0.0	7.1	chr21	33916176	33916203	(12793780)	+	(ACAAA)n	Simple_repeat	1	28	(0)	2405811
3018	11.6	2.1	1.2	chr21	33916273	33916751	(12793232)	C	MER31A	LTR/ERV1	(0)	485	3	2405812
27	22.0	5.3	5.0	chr21	34074110	34074242	(12635741)	+	(GCCCGCC)n	Simple_repeat	1	140	(0)	2406107
17	35.9	0.0	2.5	chr21	34753818	34753898	(11956085)	+	(ACAT)n	Simple_repeat	1	81	(0)	2407118
12	15.8	0.0	3.3	chr21	34753977	34754006	(11955977)	+	(ATTCG)n	Simple_repeat	1	30	(0)	2407119
13	9.8	0.0	0.0	chr21	37060460	37060481	(9649502)	+	(GCA)n	Simple_repeat	1	22	(0)	2410949
246	19.1	3.0	1.2	chr21	41635699	41636260	(5073723)	+	(TCCA)n	Simple_repeat	1	579	(0)	2417774
420	33.2	6.8	0.5	chr21	42262698	42262903	(4447080)	+	MIRb	SINE/MIR	26	245	(23)	2418660
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
2365	7.9	2.0	0.0	chr21	44018419	44018709	(2691274)	+	AluSc	SINE/Alu	1	297	(12)	2421191
1806	15.9	2.8	0.3	chr21	44019065	44019347	(2690636)	C	AluJb	SINE/Alu	(20)	292	3	2421192
2066	9.7	5.1	0.0	chr21	44255239	44255516	(2454467)	+	AluSx1	SINE/Alu	1	293	(19)	2421525
3097	24.7	10.4	4.5	chr21	45232882	45234180	(1475803)	+	Charlie2a	DNA/hAT-Charlie	1142	2536	(325)	2422663
191	30.9	1.9	0.0	chr21	45507964	45508543	(1201440)	+	(GGTG)n	Simple_repeat	1	591	(0)	2422900
194	29.4	18.5	0.0	chr21	45508730	45508848	(1201135)	C	L2b	LINE/L2	(1)	3374	3229	2422901
6541	12.7	4.3	1.3	chr21	46143385	46144361	(565622)	+	LTR13	LTR/ERVK	1	1007	(0)	2423545
1459	26.7	9.2	4.8	chr21	46148651	46149174	(560809)	+	L1MC4	LINE/L1	7483	8042	(0)	2423549
8118	4.3	0.0	0.7	chr21	46225021	46226027	(483956)	+	LTR13	LTR/ERVK	6	1005	(2)	2423633
3076	15.8	1.1	0.9	chr22	10721335	10730387	(40088081)	+	(TCCATTCCAT)n	Simple_repeat	1	9151	(0)	2424547
277	15.7	1.9	0.0	chr22	10730388	10730438	(40088030)	C	MER31A	LTR/ERV1	(433)	52	1	2424548
328	31.0	6.0	6.0	chr22	10730461	10730645	(40087823)	+	L1MEd	LINE/L1	693	877	(6209)	2424549
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
520	22.2	3.6	0.0	chr22	16917552	16917686	(33900782)	C	LTR55	LTR/ERVL?	(7)	541	402	2427984
784	23.5	9.7	3.5	chr22	16917716	16917963	(33900505)	C	LTR55	LTR/ERVL?	(205)	343	72	2427984
21	3.3	0.0	3.0	chr22	17121362	17121394	(33697074)	+	(GGCGG)n	Simple_repeat	1	33	(0)	2428253
2174	10.2	0.0	0.0	chr22	18001916	18002220	(32816248)	+	AluSz	SINE/Alu	1	305	(7)	2430020
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1333	17.8	9.6	2.9	chr22	19103764	19104044	(31714424)	+	AluJr4	SINE/Alu	1	302	(10)	2431447
995	20.1	4.6	0.0	chr22	19104044	19104252	(31714216)	C	Charlie1	DNA/hAT-Charlie	(2562)	219	1	2431448
37	7.6	2.7	2.7	chr22	20199436	20199508	(30618960)	+	(ATCC)n	Simple_repeat	1	75	(0)	2433007
457	25.1	10.1	5.7	chr22	20410102	20410269	(30408199)	C	L1ME4a	LINE/L1	(200)	5924	5738	2433256
267	28.9	2.4	1.2	chr22	20410291	20410374	(30408094)	C	L1ME4a	LINE/L1	(433)	5691	5607	2433256
332	28.4	3.3	4.1	chr22	20410536	20410656	(30407812)	C	L1ME4a	LINE/L1	(695)	5429	5310	2433256
234	32.2	11.4	3.2	chr22	20437106	20437385	(30381083)	+	L2b	LINE/L2	2931	3237	(150)	2433314
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
2181	9.8	0.0	0.0	chr22	21567166	21567462	(29251006)	C	AluSx3	SINE/Alu	(14)	297	1	2435441
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
4721	27.4	5.3	1.5	chr22	22748219	22749827	(28068641)	C	ERVL-B4-int	LTR/ERVL	(759)	4955	3282	2437336
30409	18.9	4.2	4.4	chr22	23538730	23546008	(27272460)	+	HERVK-int	LTR/ERVK	1	7267	(269)	2438464
890	26.2	4.1	1.3	chr22	23549952	23552988	(27265480)	+	(CATC)n	Simple_repeat	1	3162	(0)	2438469
1234	9.6	1.1	2.2	chr22	23657518	23657695	(27160773)	C	AluSx4	SINE/Alu	(0)	310	135	2438691
88	30.5	0.0	0.4	chr22	23657711	23657962	(27160506)	+	(TCC)n	Simple_repeat	1	252	(0)	2438692
298	20.7	3.2	4.4	chr22	23657963	23658085	(27160383)	C	FLAM_C	SINE/Alu	(109)	193	2	2438693
1183	8.0	3.3	6.9	chr22	24010696	24010884	(26807584)	+	MER30	DNA/hAT-Charlie	47	228	(2)	2439357
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
4736	16.3	4.6	0.9	chr22	24835952	24837002	(25981466)	C	L1MB2	LINE/L1	(3)	6168	5069	2440767
33	14.5	0.0	0.0	chr22	24972449	24972524	(25845944)	+	(CATGCATC)n	Simple_repeat	1	76	(0)	2441129
991	28.8	18.0	1.7	chr22	24972700	24973304	(25845164)	C	L2a	LINE/L2	(0)	3426	2694	2441130
2413	8.7	0.0	1.6	chr22	25486795	25487106	(25331362)	C	AluY	SINE/Alu	(4)	307	1	2442311
483	26.3	5.5	7.1	chr22	25487107	25487207	(25331261)	+	L2a	LINE/L2	3330	3426	(0)	2442310
358	27.1	0.3	0.6	chr22	25487213	25488121	(25330347)	+	(GATG)n	Simple_repeat	1	912	(0)	2442312
522	29.8	5.9	7.0	chr22	25943281	25943706	(24874762)	+	L2a	LINE/L2	2655	3102	(324)	2443211
2429	10.2	0.0	0.6	chr22	25943707	25944021	(24874447)	C	AluSq2	SINE/Alu	(0)	313	1	2443212
320	26.2	1.6	1.4	chr22	26735954	26737089	(24081379)	+	(CATCC)n	Simple_repeat	1	1138	(0)	2445050
16	29.5	0.0	4.2	chr22	27222070	27222140	(23596328)	+	A-rich	Low_complexity	1	71	(0)	2446238
180	22.3	2.4	0.0	chr22	27222178	27222593	(23595875)	+	(ATGG)n	Simple_repeat	1	426	(0)	2446239
2115	14.3	0.0	0.0	chr22	27702642	27702941	(23115527)	+	AluJo	SINE/Alu	3	302	(10)	2447333
1397	27.5	4.8	3.4	chr22	27702942	27703345	(23115123)	+	MER113	DNA/hAT-Charlie	92	501	(20)	2447332
456	25.0	12.0	4.0	chr22	27746215	27746389	(23072079)	+	MIRb	SINE/MIR	76	266	(2)	2447424
240	19.1	6.8	2.9	chr22	27746381	27746450	(23072018)	+	L2c	LINE/L2	3314	3386	(1)	2447425
210	33.0	15.6	0.0	chr22	28799753	28799855	(22018613)	C	MIRb	SINE/MIR	(21)	247	126	2449227
743	7.7	0.0	0.0	chr22	28801003	28801093	(22017375)	+	AluSx3	SINE/Alu	211	301	(10)	2449230
12323	6.7	2.9	0.7	chr22	29413279	29414968	(21403500)	C	HERVIP10FH-int	LTR/ERV1	(2183)	2919	1192	2450503
851	19.6	5.5	2.6	chr22	29414974	29415167	(21403301)	C	HERVIP10FH-int	LTR/ERV1	(7385)	462	263	2450503
2615	14.7	6.8	0.1	chr22	29415161	29415598	(21402870)	C	HERVE_a-int	LTR/ERV1	(7384)	463	1	2450504
3273	16.0	3.3	7.0	chr22	29581711	29582293	(21236175)	C	LTR8	LTR/ERV1	(0)	691	126	2450912
788	33.2	14.8	1.1	chr22	29765878	29766045	(21052423)	+	L2b	LINE/L2	2706	2889	(530)	2451277
768	11.8	10.5	0.0	chr22	29766046	29766164	(21052304)	+	FLAM_C	SINE/Alu	1	133	(10)	2451280
788	28.5	19.4	1.7	chr22	29766165	29766544	(21051924)	+	L2b	LINE/L2	2890	3368	(7)	2451277
182	31.3	2.9	0.0	chr22	30195879	30195945	(20622523)	C	L2	LINE/L2	(1676)	1743	1675	2452108
17	25.9	3.3	0.0	chr22	30196446	30196505	(20621963)	+	(CGCCAT)n	Simple_repeat	1	62	(0)	2452112
561	16.2	24.9	0.0	chr22	30444853	30444994	(20373474)	+	MER53	DNA/hAT	5	193	(0)	2452623
252	28.9	10.2	6.1	chr22	30592487	30592514	(20225954)	+	MamRep4096	DNA/hAT-Tip100	101	130	(296)	2452962
2368	9.5	0.0	0.0	chr22	30592515	30592818	(20225650)	+	AluSx	SINE/Alu	1	304	(8)	2452963
418	25.0	2.7	0.0	chr22	31055235	31055342	(19763126)	+	MIR3	SINE/MIR	78	188	(20)	2453898
18	7.9	3.7	0.0	chr22	31055534	31055560	(19762908)	+	(AC)n	Simple_repeat	1	28	(0)	2453899
314	27.8	5.8	5.6	chr22	31055967	31056105	(19762363)	+	MIRb	SINE/MIR	17	160	(108)	2453900
2036	15.6	0.0	0.0	chr22	31313059	31313347	(19505121)	C	AluSz6	SINE/Alu	(23)	289	1	2454498
732	27.4	12.5	5.5	chr22	32695999	32696346	(18122122)	C	MLT1J2	LTR/ERVL-MaLR	(8)	440	65	2457529
317	27.9	7.8	2.5	chr22	32800405	32800554	(18017914)	+	MIRc	SINE/MIR	87	237	(31)	2457739
18	18.1	3.9	1.9	chr22	33058470	33058521	(17759947)	+	(ACGCCC)n	Simple_repeat	1	54	(0)	2458292
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
362	32.4	8.3	3.2	chr22	33294614	33294830	(17523638)	+	L2b	LINE/L2	3147	3375	(0)	2458748
503	29.5	11.0	3.4	chr22	33294855	33295089	(17523379)	+	MIRb	SINE/MIR	2	256	(12)	2458749
56	7.1	2.1	2.1	chr22	34308746	34308839	(16509629)	+	(CCACT)n	Simple_repeat	1	96	(0)	2460809
41	3.5	3.2	3.1	chr22	34308840	34308902	(16509566)	+	(CCCAT)n	Simple_repeat	1	65	(0)	2460810
376	28.7	11.6	0.6	chr22	34308930	34309097	(16509371)	+	MIR	SINE/MIR	4	192	(70)	2460811
2036	11.8	6.6	2.7	chr22	35230881	35231246	(15587222)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2462530
221	33.0	7.3	1.7	chr22	35231258	35231374	(15587094)	C	L2c	LINE/L2	(1)	3386	3263	2462531
547	21.6	1.0	0.4	chr22	35438186	35438471	(15379997)	+	(TCCA)n	Simple_repeat	1	290	(0)	2462992
226	12.5	0.0	0.0	chr22	35438472	35438519	(15379949)	C	L1ME2z	LINE/L1	(126)	6318	6271	2462993
547	21.6	1.0	0.4	chr22	35438519	35439545	(15378923)	+	(TCCA)n	Simple_repeat	2	1032	(0)	2462994
270	19.6	1.1	0.0	chr22	35463312	35463840	(15354628)	+	(ATCC)n	Simple_repeat	1	535	(0)	2463064
226	27.3	17.0	0.0	chr22	35463858	35463945	(15354523)	C	L2b	LINE/L2	(0)	3375	3270	2463065
284	34.4	1.5	1.5	chr22	35657588	35657720	(15160748)	+	MIR3	SINE/MIR	61	193	(15)	2463535
771	25.5	9.8	0.0	chr22	36085929	36086159	(14732309)	C	MIR	SINE/MIR	(5)	257	2	2464334
2148	8.3	2.6	5.7	chr22	36123560	36123873	(14694595)	C	AluSz	SINE/Alu	(8)	304	1	2464438
2401	7.8	0.3	0.0	chr22	36354448	36354743	(14463725)	C	AluSx1	SINE/Alu	(15)	297	1	2464810
412	29.7	0.8	4.5	chr22	36354758	36354891	(14463577)	C	L1ME4c	LINE/L1	(424)	406	278	2464811
17	12.7	0.0	0.0	chr22	36354931	36354956	(14463512)	+	(A)n	Simple_repeat	1	26	(0)	2464812
53	0.0	0.0	0.0	chr22	36354957	36355001	(14463467)	+	(AC)n	Simple_repeat	1	45	(0)	2464813
2078	7.2	3.6	0.0	chr22	36481703	36481993	(14336475)	C	AluSc	SINE/Alu	(0)	309	5	2465157
16	13.2	2.1	6.2	chr22	36482131	36482197	(14336271)	+	(GGCGG)n	Simple_repeat	1	64	(0)	2465158
2226	11.2	0.0	0.3	chr22	36482316	36482627	(14335841)	C	AluSz	SINE/Alu	(1)	311	1	2465159
88	17.4	1.2	0.0	chr22	36551202	36551367	(14267101)	+	(TCCA)n	Simple_repeat	1	168	(0)	2465317
13	15.8	0.0	7.3	chr22	36551360	36551400	(14267068)	+	(TCAAT)n	Simple_repeat	1	41	(0)	2465318
207	30.4	9.8	4.2	chr22	36551401	36551496	(14266972)	C	L2c	LINE/L2	(0)	3387	3286	2465319
14	15.9	0.0	0.0	chr22	36776112	36776139	(14042329)	+	(CCT)n	Simple_repeat	1	28	(0)	2465819
39	0.0	4.7	0.0	chr22	37661332	37661374	(13157094)	+	(GTGTG)n	Simple_repeat	1	45	(0)	2467757
327	23.9	14.8	0.9	chr22	37661632	37661741	(13156727)	+	L2a	LINE/L2	3297	3424	(2)	2467758
1266	13.2	0.0	1.6	chr22	37661893	37662115	(13156353)	C	AluSx1	SINE/Alu	(0)	312	127	2467759
1609	13.9	11.6	0.4	chr22	37716428	37716694	(13101774)	C	AluSx1	SINE/Alu	(11)	301	1	2467904
360	35.6	3.0	0.6	chr22	37716701	37716864	(13101604)	C	L2	LINE/L2	(528)	2891	2724	2467905
1032	31.7	6.3	5.8	chr22	37716865	37716969	(13101499)	+	L1MC4	LINE/L1	7176	7282	(760)	2467906
11017	6.1	9.1	0.1	chr22	37716970	37718404	(13100064)	C	LTR12C	LTR/ERV1	(0)	1579	3	2467907
17	21.0	0.0	5.5	chr22	37843852	37843918	(12974550)	+	(GCCCC)n	Simple_repeat	1	63	(0)	2468201
1587	26.0	6.6	0.9	chr22	38387159	38387589	(12430879)	+	L1MCa	LINE/L1	3	459	(6049)	2469387
17	12.2	4.0	5.8	chr22	38398524	38398573	(12419895)	+	GA-rich	Low_complexity	1	52	(0)	2469395
495	29.6	12.9	1.0	chr22	38706962	38707166	(12111302)	+	MIR	SINE/MIR	20	252	(10)	2470145
18	12.6	0.0	0.0	chr22	38981378	38981404	(11837064)	+	(A)n	Simple_repeat	1	27	(0)	2470649
979	15.8	18.1	0.3	chr22	39533082	39533367	(11285101)	+	Charlie1	DNA/hAT-Charlie	2393	2740	(41)	2471834
399	21.6	0.9	0.1	chr22	39582712	39583565	(11234903)	+	(CCAT)n	Simple_repeat	1	862	(0)	2471949
473	24.2	1.8	2.4	chr22	39671971	39672139	(11146329)	+	L1MEj	LINE/L1	1933	2100	(60)	2472143
2153	12.7	0.6	1.6	chr22	40457083	40457397	(10361071)	+	AluSx1	SINE/Alu	1	312	(0)	2473589
83	5.9	3.1	1.5	chr22	40457398	40457525	(10360943)	+	(GAAA)n	Simple_repeat	1	132	(0)	2473590
2490	12.4	3.2	0.0	chr22	40552411	40552773	(10265695)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2473784
13	23.6	0.0	0.0	chr22	40636655	40636689	(10181779)	+	(CGC)n	Simple_repeat	1	35	(0)	2473972
2473	7.5	0.0	0.0	chr22	40707898	40708192	(10110276)	C	AluY	SINE/Alu	(16)	295	1	2474155
46	10.8	1.2	3.5	chr22	40708273	40708358	(10110110)	+	GA-rich	Low_complexity	1	87	(0)	2474156
547	31.8	3.7	0.8	chr22	40708364	40708598	(10109870)	C	L2	LINE/L2	(1137)	2282	2041	2474157
464	22.4	5.6	4.4	chr22	40708614	40708772	(10109696)	+	MLT1C	LTR/ERVL-MaLR	8	168	(299)	2474158
410	20.6	10.3	9.3	chr22	41023024	41023205	(9795263)	C	L1MC5	LINE/L1	(12)	9292	9109	2474934
467	25.2	13.0	2.1	chr22	41023417	41023655	(9794813)	C	L2	LINE/L2	(725)	2694	2426	2474935
1585	14.7	1.8	0.0	chr22	41023692	41023916	(9794552)	C	AluSx3	SINE/Alu	(81)	230	2	2474936
1548	14.8	7.2	1.7	chr22	41108989	41109278	(9709190)	+	AluJb	SINE/Alu	1	307	(5)	2475172
310	24.3	6.4	2.8	chr22	41109419	41109524	(9708944)	+	MIR	SINE/MIR	153	262	(0)	2475173
2375	10.4	0.0	0.0	chr22	41565174	41565472	(9252996)	+	AluSg	SINE/Alu	5	303	(7)	2476213
632	18.2	0.0	0.0	chr22	41565519	41565617	(9252851)	+	AluJb	SINE/Alu	208	306	(6)	2476214
1895	20.4	2.8	3.2	chr22	42133120	42133538	(8684930)	C	L1M4	LINE/L1	(5782)	1735	1319	2477467
2381	9.2	1.3	0.0	chr22	42133539	42133844	(8684624)	C	AluSg	SINE/Alu	(0)	310	1	2477470
14359	12.9	3.7	2.6	chr22	42236720	42238835	(8579633)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	231	2477626
1075	22.0	13.7	3.7	chr22	43187850	43188009	(7630459)	C	BLACKJACK	DNA/hAT-Blackjack	(740)	2229	2079	2479780
878	12.1	0.8	0.0	chr22	43188010	43188133	(7630335)	+	FLAM_A	SINE/Alu	1	125	(17)	2479781
1075	22.0	13.7	3.7	chr22	43188134	43188430	(7630038)	C	BLACKJACK	DNA/hAT-Blackjack	(891)	2078	1719	2479780
27	16.5	0.9	0.0	chr22	43201333	43201377	(7617091)	+	A-rich	Low_complexity	1	45	(0)	2479815
1383	20.9	14.8	0.5	chr22	43201386	43201817	(7616651)	+	MLT2B2	LTR/ERVL	1	505	(10)	2479816
1466	13.6	0.0	0.0	chr22	44037225	44037445	(6781023)	+	AluJb	SINE/Alu	85	305	(7)	2481236
519	26.4	11.0	2.1	chr22	44037485	44037674	(6780794)	C	MIR	SINE/MIR	(18)	244	36	2481237
428	10.9	1.6	0.8	chr22	44322916	44323691	(6494777)	+	(TCCA)n	Simple_repeat	1	788	(0)	2481761
18	13.6	0.0	4.4	chr22	44323692	44323707	(6494761)	+	(TTCA)n	Simple_repeat	4	18	(0)	2481762
2143	9.0	2.4	1.7	chr22	44684261	44684549	(6133919)	+	AluSx	SINE/Alu	1	291	(21)	2482425
392	30.9	5.7	0.7	chr22	44685008	44685157	(6133311)	+	MIRb	SINE/MIR	21	178	(90)	2482426
211	21.7	7.8	3.9	chr22	44685253	44685335	(6133133)	+	MIR1_Amn	SINE/MIR	79	159	(49)	2482427
329	32.3	11.0	1.9	chr22	45106355	45106619	(5711849)	+	L2b	LINE/L2	3079	3370	(5)	2483261
44232	5.5	0.7	0.8	chr22	45556296	45561682	(5256786)	C	HERVL-int	LTR/ERVL	(274)	5380	1	2484161
276	33.7	12.1	4.4	chr22	45929175	45929357	(4889111)	+	L2c	LINE/L2	3136	3334	(53)	2484750
2146	24.8	9.1	2.0	chr22	46009636	46010183	(4808285)	+	MLT1G	LTR/ERVL-MaLR	1	591	(0)	2484870
706	13.3	0.0	0.0	chr22	46568754	46568851	(4249617)	+	AluSq2	SINE/Alu	216	313	(0)	2485742
29	25.0	2.4	0.0	chr22	46648068	46648150	(4170318)	+	(ATGG)n	Simple_repeat	1	85	(0)	2485846
32	7.7	1.3	6.2	chr22	46648153	46648231	(4170237)	+	(GATG)n	Simple_repeat	1	80	(0)	2485847
13	21.8	2.6	0.0	chr22	46648267	46648304	(4170164)	+	(ATGG)n	Simple_repeat	1	39	(0)	2485848
348	9.0	1.9	2.8	chr22	46648319	46648985	(4169483)	+	(TGGA)n	Simple_repeat	1	680	(0)	2485849
292	32.7	10.2	2.6	chr22	46954171	46954368	(3864100)	+	MIRb	SINE/MIR	31	241	(27)	2486280
188	9.6	2.1	2.6	chr22	47302592	47302970	(3515498)	+	(ATCC)n	Simple_repeat	1	387	(0)	2486682
93	19.7	0.0	0.0	chr22	47379205	47379385	(3439083)	+	(GCG)n	Simple_repeat	1	181	(0)	2486767
239	28.1	2.2	1.1	chr22	47379395	47379484	(3438984)	+	L1MEi	LINE/L1	1394	1484	(728)	2486768
410	18.2	3.0	0.8	chr22	48686597	48687483	(2130985)	+	(TGGA)n	Simple_repeat	1	914	(0)	2488496
793	20.7	4.4	0.0	chr22	49123435	49123608	(1694860)	+	MER31A	LTR/ERV1	1	182	(303)	2489014
602	25.4	0.4	5.6	chr22	49124152	49124450	(1694018)	C	L1ME3D	LINE/L1	(160)	6082	5793	2489015
2290	10.4	0.0	0.3	chr22	49893882	49894179	(924289)	+	AluSx	SINE/Alu	1	297	(15)	2489919
667	31.1	13.3	1.0	chr22	49894180	49894744	(923724)	+	L1MEg	LINE/L1	3012	3670	(3567)	2489918
2006	22.2	11.8	10.9	chr22	50212003	50213065	(605403)	C	L1MB3	LINE/L1	(2354)	4028	3083	2490334
1964	14.8	1.4	0.0	chr22	50213066	50213356	(605112)	C	AluSz	SINE/Alu	(17)	295	1	2490336
17	18.2	2.2	2.1	chr22	50270303	50270348	(548120)	+	(GCCCCGC)n	Simple_repeat	1	47	(0)	2490386
14	23.2	4.7	3.0	chr22	50270349	50270364	(548104)	+	(CAGCCC)n	Simple_repeat	3	67	(0)	2490387
12	13.9	6.2	0.0	chr22	50343231	50343283	(475185)	+	(CCCCG)n	Simple_repeat	1	56	(0)	2490488
26	18.0	0.0	4.4	chr22	50612841	50612908	(205560)	+	(GCCCC)n	Simple_repeat	1	68	(0)	2490951
452	20.0	0.0	0.0	chr22	50749454	50749538	(68930)	C	L1M5	LINE/L1	(494)	5685	5601	2491154
2022	25.8	5.0	2.1	chr22	50749532	50750149	(68319)	C	L1ME1	LINE/L1	(73)	6106	5470	2491155
417	14.7	2.9	0.0	chr22	50800307	50800374	(18094)	+	MLT2B3	LTR/ERVL	3	72	(482)	2491221
337	21.6	3.5	1.4	chr22	50800400	50800492	(17976)	+	MLT2B3	LTR/ERVL	3	96	(621)	2491222
323	22.9	3.5	1.4	chr22	50800493	50800585	(17883)	+	MLT2B3	LTR/ERVL	3	96	(621)	2491223
339	21.6	3.5	1.4	chr22	50800586	50800678	(17790)	+	MLT2B3	LTR/ERVL	3	96	(621)	2491224
210	29.5	16.8	4.7	chr3	10026799	10026926	(188268633)	+	MIRb	SINE/MIR	119	261	(1)	2508499
2049	12.7	0.0	0.7	chr3	10125113	10125403	(188170156)	C	AluSx	SINE/Alu	(22)	290	2	2508697
1694	26.8	3.2	4.4	chr3	10125404	10125430	(188170129)	C	MLT1E2	LTR/ERVL-MaLR	(589)	38	13	2508696
16	11.7	3.6	0.0	chr3	10125559	10125586	(188169973)	+	(GT)n	Simple_repeat	1	29	(0)	2508698
186	22.7	2.0	2.2	chr3	10368426	10368924	(187926635)	+	(CATC)n	Simple_repeat	1	509	(0)	2509275
1049	23.2	10.4	4.7	chr3	11596872	11597215	(186698344)	+	L1MC4	LINE/L1	6751	7116	(926)	2511719
6171	10.4	6.3	1.0	chr3	12867827	12868729	(185426830)	+	LTR13_	LTR/ERVK	1	954	(0)	2514258
266	28.8	1.0	7.0	chr3	12962222	12962338	(185333221)	C	MIR	SINE/MIR	(0)	268	159	2514373
188	31.3	5.7	1.2	chr3	12963003	12963086	(185332473)	+	MIRb	SINE/MIR	1	88	(180)	2514374
510	18.4	1.9	0.0	chr3	13206215	13206317	(185089242)	+	Tigger7	DNA/TcMar-Tigger	2380	2484	(7)	2514826
31	30.4	6.4	0.0	chr3	13895363	13895535	(184400024)	+	(GAGCG)n	Simple_repeat	1	184	(0)	2516116
33	5.1	0.0	0.0	chr3	13895541	13895581	(184399978)	+	(GGAGCCGAGC)n	Simple_repeat	1	41	(0)	2516117
3966	16.9	6.0	1.5	chr3	14679857	14680665	(183614894)	+	L1MB8	LINE/L1	5331	6178	(0)	2517441
265	19.6	1.8	0.0	chr3	15113786	15113841	(183181718)	+	L2a	LINE/L2	3361	3417	(9)	2518205
339	25.8	2.2	0.0	chr3	15113857	15113945	(183181614)	+	MIR	SINE/MIR	82	172	(90)	2518206
628	26.7	8.2	9.8	chr3	15113989	15114324	(183181235)	C	MLT1J1	LTR/ERVL-MaLR	(111)	333	4	2518207
3174	15.0	0.9	3.5	chr3	15114343	15114888	(183180671)	+	LTR26C	LTR/ERV1	1	532	(7)	2518208
1775	9.9	0.0	0.5	chr3	15202546	15202766	(183092793)	C	AluSx1	SINE/Alu	(91)	221	1	2518361
560	24.0	6.4	1.1	chr3	15203231	15203407	(183092152)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	2518362
1978	18.6	0.5	6.7	chr3	15534237	15534540	(182761019)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	102	2519011
2418	8.8	0.0	0.7	chr3	15534541	15534846	(182760713)	C	AluSx3	SINE/Alu	(7)	304	1	2519012
3132	7.9	0.8	12.8	chr3	16101342	16101889	(182193670)	C	LTR10F	LTR/ERV1	(29)	482	1	2519934
257	15.2	0.0	0.0	chr3	16515621	16515666	(181779893)	+	L2b	LINE/L2	3330	3375	(0)	2520631
1917	25.7	26.6	2.1	chr3	17580473	17580960	(180714599)	+	L2a	LINE/L2	1574	2306	(1113)	2522067
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
21	22.5	1.2	6.0	chr3	20040468	20040549	(178255010)	+	G-rich	Low_complexity	1	83	(0)	2525557
33	9.0	5.0	0.0	chr3	20040837	20040896	(178254663)	+	(CCCGCCT)n	Simple_repeat	1	63	(0)	2525558
677	22.7	11.7	0.8	chr3	24445858	24446092	(173849467)	+	L1ME4a	LINE/L1	5784	6047	(77)	2531885
19	12.1	0.0	0.0	chr3	24446561	24446588	(173848971)	+	(A)n	Simple_repeat	1	28	(0)	2531889
12	16.9	0.0	0.0	chr3	24494523	24494549	(173801010)	+	(CGCC)n	Simple_repeat	1	27	(0)	2531964
14	15.3	0.0	0.0	chr3	27369307	27369335	(170926224)	+	(GTCCC)n	Simple_repeat	1	29	(0)	2535958
2005	8.4	2.1	0.0	chr3	27711868	27712104	(170583455)	+	AluSx	SINE/Alu	5	246	(66)	2536636
28	5.9	0.0	0.0	chr3	27712110	27712145	(170583414)	+	(T)n	Simple_repeat	1	36	(0)	2536637
3299	8.3	8.0	0.4	chr3	27828666	27829137	(170466422)	+	LTR10F	LTR/ERV1	1	511	(0)	2536843
345	25.4	11.6	3.0	chr3	28241156	28241289	(170054270)	+	L2a	LINE/L2	3279	3425	(1)	2537505
570	24.5	6.5	0.6	chr3	32178167	32178326	(166117233)	+	MLT1H	LTR/ERVL-MaLR	23	192	(357)	2543367
282	37.5	6.3	6.1	chr3	35839524	35840029	(162455530)	+	MamGypLTR1b	LTR/Gypsy	276	782	(0)	2549170
205	31.4	14.2	2.0	chr3	35840071	35840268	(162455291)	C	L2c	LINE/L2	(63)	3324	3099	2549171
258	35.5	7.2	0.0	chr3	35840308	35840462	(162455097)	C	L2c	LINE/L2	(929)	2490	2324	2549171
1003	30.8	5.0	2.0	chr3	36762319	36762725	(161532834)	C	LTR16C	LTR/ERVL	(0)	489	70	2550360
109	27.3	0.0	0.7	chr3	37688805	37689088	(160606471)	+	G-rich	Low_complexity	1	284	(0)	2551932
2232	11.1	0.7	0.0	chr3	38174302	38174598	(160120961)	+	AluSz6	SINE/Alu	1	299	(13)	2552628
1594	22.2	12.2	6.6	chr3	38174599	38174858	(160120701)	C	L2a	LINE/L2	(623)	2796	2484	2552627
2000	14.4	7.2	6.6	chr3	39131536	39131960	(159163599)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2554017
2328	7.8	1.0	0.0	chr3	40476017	40476310	(157819249)	+	AluSg	SINE/Alu	1	297	(13)	2556062
5831	11.8	1.2	3.0	chr3	40476311	40476514	(157819045)	C	MER4D1	LTR/ERV1	(694)	206	1	2556059
226	27.9	15.5	1.2	chr3	40476521	40476680	(157818879)	C	MIR	SINE/MIR	(57)	205	19	2556063
16	0.0	0.0	0.0	chr3	43565733	43565750	(154729809)	+	(A)n	Simple_repeat	1	18	(0)	2560808
26503	2.5	0.1	0.0	chr3	43565823	43571847	(154723712)	+	L1PA2	LINE/L1	125	6154	(1)	2560809
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
2292	17.1	14.9	2.8	chr3	45649794	45650294	(152645265)	C	L1MB7	LINE/L1	(4724)	1676	1072	2564226
7132	6.2	1.0	0.2	chr3	45650339	45651637	(152643922)	C	L1PA6	LINE/L1	(2)	6152	4846	2564229
2102	22.9	3.7	0.6	chr3	46558358	46558849	(151736710)	C	L1MEf	LINE/L1	(5546)	1001	494	2565597
1243	17.8	5.5	0.1	chr3	46558827	46559106	(151736453)	+	L1MA7	LINE/L1	5886	6179	(112)	2565602
1957	31.7	7.2	8.8	chr3	46834473	46835025	(151460534)	C	ERVL-E-int	LTR/ERVL	(3977)	1690	1138	2565995
5560	15.0	6.4	3.4	chr3	46835026	46836001	(151459558)	C	LTR13	LTR/ERVK	(0)	1007	1	2565996
1767	18.7	1.1	0.7	chr3	47651023	47651306	(150644253)	+	AluJb	SINE/Alu	1	285	(27)	2567627
1069	29.1	5.4	6.5	chr3	47651308	47651861	(150643698)	+	L2a	LINE/L2	2810	3376	(50)	2567628
44115	7.1	1.7	0.7	chr3	48005375	48007676	(150287883)	+	HERVL-int	LTR/ERVL	953	3289	(2365)	2568427
825	29.7	5.2	6.5	chr3	48193968	48194163	(150101396)	+	L2b	LINE/L2	1983	2175	(1244)	2568905
194	28.8	4.3	0.0	chr3	48194318	48194383	(150101176)	+	L2b	LINE/L2	3306	3374	(1)	2568905
13	19.2	0.0	0.0	chr3	48898796	48898825	(149396734)	+	(GTCA)n	Simple_repeat	1	30	(0)	2570220
1151	28.3	9.3	3.5	chr3	48899105	48899581	(149395978)	C	L2a	LINE/L2	(0)	3426	2904	2570221
2499	5.1	0.0	0.3	chr3	49890730	49891025	(148404534)	C	AluY	SINE/Alu	(16)	295	1	2572151
12	18.3	0.0	3.0	chr3	49891583	49891615	(148403944)	+	(GCAGG)n	Simple_repeat	1	33	(0)	2572152
1935	12.2	4.3	0.0	chr3	49930379	49930666	(148364893)	+	AluSz	SINE/Alu	1	301	(11)	2572231
503	21.1	0.7	17.4	chr3	49930667	49930775	(148364784)	C	MER5B	DNA/hAT-Charlie	(56)	122	31	2572230
12	22.8	0.0	7.5	chr3	50256500	50256552	(148039007)	+	(GCT)n	Simple_repeat	1	53	(0)	2572835
926	33.9	2.9	0.5	chr3	50519360	50519736	(147775823)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	25	2573144
8613	2.2	1.1	0.0	chr3	50519892	50520848	(147774711)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	2573145
13	23.3	3.9	1.9	chr3	50542981	50543032	(147752527)	+	(GAGCTGG)n	Simple_repeat	1	54	(0)	2573176
3344	9.1	1.0	5.4	chr3	50801044	50801578	(147493981)	C	LTR10F	LTR/ERV1	(0)	511	1	2573587
27456	2.7	0.0	0.0	chr3	50973138	50979172	(147316387)	C	L1PA3	LINE/L1	(0)	6155	124	2573803
11367	17.1	1.9	1.9	chr3	50979179	50979311	(147316248)	C	L1M2	LINE/L1	(1637)	5925	5797	2573801
1855	18.2	5.9	3.1	chr3	50979312	50979725	(147315834)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2573804
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
33	0.0	0.0	0.0	chr3	51500117	51500152	(146795407)	+	(A)n	Simple_repeat	1	36	(0)	2574462
2595	17.9	8.7	2.3	chr3	51801912	51802436	(146493123)	+	LTR75	LTR/ERVL	1	562	(0)	2574991
3686	7.7	0.8	5.6	chr3	51902374	51902910	(146392649)	+	LTR10F	LTR/ERV1	1	511	(0)	2575131
940	26.2	4.7	3.2	chr3	52946379	52946776	(145348783)	C	L1ME3B	LINE/L1	(276)	5966	5511	2576696
2153	13.9	0.0	0.0	chr3	52946777	52947070	(145348489)	C	AluSz6	SINE/Alu	(17)	295	2	2576697
719	21.2	6.0	8.1	chr3	52947071	52947112	(145348447)	C	L1ME3B	LINE/L1	(732)	5510	5481	2576696
2550	7.2	0.0	0.0	chr3	52947113	52947416	(145348143)	C	AluY	SINE/Alu	(7)	304	1	2576698
2340	12.9	11.2	0.3	chr3	53386031	53386410	(144909149)	C	MSTA	LTR/ERVL-MaLR	(0)	428	2	2577555
264	34.2	4.5	9.0	chr3	53386411	53386573	(144908986)	C	L2c	LINE/L2	(88)	3299	3146	2577554
2136	13.3	0.3	0.0	chr3	53386593	53386886	(144908673)	C	AluSx1	SINE/Alu	(16)	296	2	2577556
27652	2.2	0.1	0.5	chr3	53921748	53927805	(144367754)	C	L1PA2	LINE/L1	(1)	6154	124	2578250
424	27.9	5.6	10.9	chr3	54407960	54408242	(143887317)	C	L2a	LINE/L2	(4)	3422	3135	2579028
850	20.2	7.8	5.2	chr3	54408354	54408745	(143886814)	+	LTR54B	LTR/ERV1	56	496	(2)	2579029
28281	6.1	0.6	0.1	chr3	55260823	55264254	(143031305)	+	HERVL-int	LTR/ERVL	1	3449	(2205)	2580175
263	28.7	12.9	2.5	chr3	57951305	57951422	(140344137)	C	MIRb	SINE/MIR	(120)	148	17	2585001
2051	12.1	2.0	1.6	chr3	58016049	58016353	(140279206)	C	AluSq	SINE/Alu	(7)	306	1	2585198
26	16.5	1.9	0.0	chr3	58016468	58016521	(140279038)	+	(ATAT)n	Simple_repeat	1	55	(0)	2585199
945	25.4	8.1	2.6	chr3	58306734	58307373	(139988186)	C	L2a	LINE/L2	(0)	3426	2741	2585764
1702	11.0	11.8	0.8	chr3	58307442	58307704	(139987855)	+	AluSz6	SINE/Alu	1	296	(16)	2585765
20	16.7	2.5	0.0	chr3	58324884	58324923	(139970636)	+	(TA)n	Simple_repeat	1	41	(0)	2585803
15	19.7	0.0	0.0	chr3	58324906	58324934	(139970625)	+	(T)n	Simple_repeat	1	29	(0)	2585804
2076	14.3	0.3	1.0	chr3	58325083	58325390	(139970169)	C	AluJo	SINE/Alu	(5)	307	2	2585805
571	32.9	8.1	4.5	chr3	58474036	58474391	(139821168)	C	MLT1L	LTR/ERVL-MaLR	(205)	405	36	2586086
2910	14.9	5.6	0.4	chr3	58474392	58474883	(139820676)	C	LTR53	LTR/ERVL	(0)	519	1	2586088
350	28.3	8.4	0.7	chr3	58726275	58726427	(139569132)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	246	2586567
318	38.2	5.5	6.7	chr3	58726694	58727104	(139568455)	+	L1MDa	LINE/L1	383	748	(5885)	2586568
1020	27.1	2.5	3.2	chr3	58727138	58727432	(139568127)	C	MLT1I-int	LTR/ERVL-MaLR	(438)	949	651	2586567
1766	22.1	11.9	1.1	chr3	58995549	58995975	(139299584)	+	MLT2B1	LTR/ERVL	1	484	(36)	2586891
12	19.5	2.9	0.0	chr3	60729047	60729081	(137566478)	+	A-rich	Low_complexity	1	36	(0)	2589426
18	26.3	0.0	0.0	chr3	61563128	61563178	(136732381)	+	G-rich	Low_complexity	1	51	(0)	2590830
258	27.5	6.3	3.5	chr3	61583379	61583492	(136712067)	+	MIRb	SINE/MIR	111	236	(32)	2590860
210	30.8	3.7	0.0	chr3	62018954	62019031	(136276528)	+	L3	LINE/CR1	3770	3850	(249)	2591611
168	19.8	0.3	2.6	chr3	69374961	69375336	(128920223)	+	(CATC)n	Simple_repeat	1	377	(0)	2604039
394	31.3	8.7	8.7	chr3	69375338	69375589	(128919970)	C	MIR	SINE/MIR	(5)	257	6	2604040
537	17.8	14.1	15.8	chr3	69668842	69669036	(128626523)	C	MLT1F2	LTR/ERVL-MaLR	(58)	502	306	2604576
351	28.4	1.9	0.0	chr3	69669111	69669212	(128626347)	C	MLT1F2	LTR/ERVL-MaLR	(399)	161	58	2604576
193	35.5	3.2	4.7	chr3	69669399	69669525	(128626034)	+	L2c	LINE/L2	3263	3387	(0)	2604578
354	30.1	1.1	0.0	chr3	69669544	69669636	(128625923)	+	MIRc	SINE/MIR	66	159	(109)	2604579
2990	0.6	0.0	2.5	chr3	69691516	69691829	(128603730)	C	AluYa5	SINE/Alu	(5)	306	1	2604629
20	0.0	0.0	3.6	chr3	69785267	69785294	(128510265)	+	(CAG)n	Simple_repeat	1	28	(0)	2604804
470	31.6	12.8	0.9	chr3	69785314	69785533	(128510026)	C	MIR	SINE/MIR	(10)	252	3	2604805
276	25.0	6.5	0.0	chr3	69924692	69924763	(128370796)	C	Charlie4z	DNA/hAT-Charlie	(62)	105	29	2605041
2180	19.9	3.0	3.6	chr3	70780485	70780730	(127514829)	C	MER6	DNA/TcMar-Tigger	(628)	237	1	2606286
244	36.1	6.1	6.1	chr3	70780737	70781016	(127514543)	C	L2c	LINE/L2	(78)	3297	3018	2606284
30	19.1	0.0	0.0	chr3	71583424	71583478	(126712081)	+	(T)n	Simple_repeat	1	55	(0)	2607453
13	22.1	0.0	0.0	chr3	71583468	71583499	(126712060)	+	(TTG)n	Simple_repeat	1	32	(0)	2607454
24	31.4	3.9	0.0	chr3	71583622	71583723	(126711836)	+	(CG)n	Simple_repeat	1	106	(0)	2607455
1856	22.2	2.6	3.4	chr3	72217039	72217180	(126078379)	C	LTR40b	LTR/ERVL	(319)	143	1	2608720
572	27.8	15.5	1.8	chr3	72217183	72217570	(126077989)	+	L2a	LINE/L2	2526	2976	(443)	2608716
12898	20.7	4.0	1.8	chr3	72225667	72226933	(126068626)	C	L1M4b	LINE/L1	(5447)	1420	101	2608737
17	7.0	0.0	5.9	chr3	72380443	72380476	(125915083)	+	(AAAACA)n	Simple_repeat	1	34	(0)	2609058
1912	11.0	4.1	2.4	chr3	72380505	72380794	(125914765)	C	AluSx3	SINE/Alu	(16)	295	1	2609059
2061	22.2	1.7	1.4	chr3	72928152	72928566	(125366993)	+	L1M4b	LINE/L1	11	426	(6441)	2610228
1023	19.1	3.5	0.5	chr3	72928575	72928769	(125366790)	+	L1M4b	LINE/L1	823	1023	(5844)	2610228
225	16.7	11.1	4.0	chr3	72928767	72928841	(125366718)	+	L1M4b	LINE/L1	2933	3013	(3854)	2610228
17	21.3	5.6	0.0	chr3	72928989	72929042	(125366517)	+	(CCG)n	Simple_repeat	1	57	(0)	2610229
1413	18.4	2.3	3.0	chr3	80770588	80770950	(117524609)	C	LTR1A2	LTR/ERV1	(435)	348	1	2621188
1084	17.9	0.5	7.6	chr3	85487233	85487455	(112808104)	+	AluJr	SINE/Alu	1	207	(105)	2627078
120	12.8	0.0	0.0	chr3	85487479	85487666	(112807893)	+	(AGG)n	Simple_repeat	1	188	(0)	2627079
44	9.1	0.0	0.0	chr3	85487725	85487784	(112807775)	+	(TG)n	Simple_repeat	1	60	(0)	2627080
378	29.4	7.4	12.1	chr3	87798506	87798934	(110496625)	+	L2c	LINE/L2	1804	2210	(1209)	2629965
3630	19.4	4.5	0.0	chr3	95959222	95959898	(102335661)	+	ERVL-B4-int	LTR/ERVL	1022	1730	(3984)	2636124
18	12.0	0.0	0.0	chr3	97465964	97465990	(100829569)	+	(T)n	Simple_repeat	1	27	(0)	2637834
518	22.9	10.7	0.5	chr3	97466417	97466600	(100828959)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	381	2637835
2829	27.9	16.2	0.2	chr3	97675866	97676949	(100618610)	C	L2	LINE/L2	(744)	2675	1385	2638092
602	16.9	4.1	0.8	chr3	97676955	97677073	(100618486)	+	Charlie5	DNA/hAT-Charlie	5	127	(2497)	2638093
821	18.8	18.5	2.0	chr3	97677059	97677351	(100618208)	+	Charlie5	DNA/hAT-Charlie	2226	2577	(47)	2638094
2313	14.9	4.2	5.3	chr3	99804059	99804432	(98491127)	C	MSTA	LTR/ERVL-MaLR	(39)	389	1	2640736
11087	15.9	0.1	0.1	chr3	99804433	99806064	(98489495)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2640736
2210	14.3	1.3	0.0	chr3	100555980	100556280	(97739279)	C	AluSx1	SINE/Alu	(7)	305	1	2641906
435	30.8	5.2	0.0	chr3	100611518	100611699	(97683860)	C	L4_C_Mam	LINE/RTE-X	(181)	4957	4766	2641979
19	7.4	0.0	0.0	chr3	100611852	100611880	(97683679)	+	(CACTC)n	Simple_repeat	1	29	(0)	2641980
434	21.8	7.8	9.3	chr3	100611992	100612239	(97683320)	C	Charlie24	DNA/hAT-Charlie	(22)	2428	2185	2641981
16	0.0	0.0	0.0	chr3	100993561	100993578	(97301981)	+	(A)n	Simple_repeat	1	18	(0)	2642427
22220	14.3	1.4	1.4	chr3	101692862	101698340	(96597219)	+	HERVK-int	LTR/ERVK	1	5534	(2002)	2643453
249	23.8	8.7	0.0	chr3	101771471	101771554	(96524005)	C	L1MA10	LINE/L1	(63)	6271	6180	2643581
2203	18.2	6.8	7.0	chr3	101771584	101772145	(96523414)	C	L1ME1	LINE/L1	(290)	5889	5320	2643582
18	23.9	0.0	2.2	chr3	107522822	107522867	(90772692)	+	(TG)n	Simple_repeat	1	46	(0)	2651000
31	0.0	0.0	0.0	chr3	107523219	107523247	(90772312)	+	(GCG)n	Simple_repeat	1	29	(0)	2651001
14667	13.2	2.3	2.8	chr3	107600858	107602432	(90693127)	+	Tigger1	DNA/TcMar-Tigger	1	1592	(826)	2651113
224	37.1	2.1	3.1	chr3	107900140	107900331	(90395228)	+	L2	LINE/L2	2674	2863	(556)	2651506
30051	7.7	1.4	0.3	chr3	109774936	109780540	(88515019)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2654403
975	26.2	9.9	2.7	chr3	111780102	111780257	(86515302)	+	MSTD	LTR/ERVL-MaLR	3	183	(213)	2656913
149	3.9	0.6	0.0	chr3	111780258	111780416	(86515143)	+	(AAG)n	Simple_repeat	1	160	(0)	2656914
975	26.2	9.9	2.7	chr3	111780417	111780624	(86514935)	+	MSTD	LTR/ERVL-MaLR	184	395	(1)	2656913
7241	18.2	4.2	3.8	chr3	112589784	112590446	(85705113)	C	L1M3	LINE/L1	(1737)	4403	3727	2658045
21	23.3	0.0	0.0	chr3	112590447	112590489	(85705070)	+	(GT)n	Simple_repeat	1	43	(0)	2658047
370	35.2	3.0	2.5	chr3	112590531	112590728	(85704831)	C	L1MC4	LINE/L1	(5601)	614	416	2658042
9820	10.8	0.5	1.2	chr3	112692601	112694117	(85601442)	+	L1PB1	LINE/L1	252	1757	(5105)	2658181
9640	7.3	0.4	0.2	chr3	112694118	112695398	(85600161)	+	HERVL-int	LTR/ERVL	1396	2679	(2975)	2658182
239	29.3	0.0	0.0	chr3	113119644	113119701	(85175858)	+	MIRc	SINE/MIR	87	144	(124)	2658757
1100	24.6	1.5	1.5	chr3	113120258	113120517	(85175042)	C	MIRb	SINE/MIR	(8)	260	1	2658758
1007	18.7	5.6	1.1	chr3	113577813	113578001	(84717558)	C	MER63A	DNA/hAT-Blackjack	(7)	203	6	2659410
190	26.9	2.9	1.5	chr3	113745275	113745342	(84550217)	C	AmnSINE1	SINE/5S-Deu-L2	(417)	158	90	2659670
2506	17.9	2.8	0.2	chr3	114060676	114061124	(84234435)	C	Tigger7	DNA/TcMar-Tigger	(2026)	465	5	2660187
403	27.6	6.0	0.7	chr3	114061276	114061417	(84234142)	+	MamRep605	LTR?	574	723	(126)	2660188
16	14.1	0.0	5.7	chr3	114214153	114214187	(84081372)	+	GA-rich	Low_complexity	1	35	(0)	2660474
603	29.0	5.6	0.6	chr3	114214655	114214824	(84080735)	+	X6B_LINE	LINE/CR1	894	1072	(0)	2660475
477	32.3	2.4	4.8	chr3	118884455	118884693	(79410866)	+	MIR	SINE/MIR	1	223	(45)	2666821
291	18.4	6.2	7.3	chr3	118884680	118884761	(79410798)	C	MIRc	SINE/MIR	(29)	239	159	2666822
12	14.7	3.3	0.0	chr3	119322765	119322794	(78972765)	+	(GCTCCT)n	Simple_repeat	1	31	(0)	2667375
245	30.7	10.9	1.8	chr3	119637928	119638093	(78657466)	+	L2	LINE/L2	2393	2575	(844)	2667924
198	21.6	5.5	0.0	chr3	119892185	119892235	(78403324)	+	L2c	LINE/L2	2807	2860	(559)	2668312
227	37.5	11.5	1.1	chr3	119892389	119892652	(78402907)	+	L2c	LINE/L2	3074	3368	(19)	2668312
2159	9.2	1.8	0.7	chr3	121746454	121746779	(76548780)	C	AluSq2	SINE/Alu	(0)	313	1	2670936
475	21.2	3.4	0.9	chr3	121746780	121746893	(76548666)	C	MIR	SINE/MIR	(67)	195	79	2670937
440	24.6	7.6	1.8	chr3	121750228	121750339	(76545220)	C	MIR3	SINE/MIR	(46)	162	44	2670942
326	27.9	13.4	6.1	chr3	122744804	122745410	(75550149)	+	L1M4	LINE/L1	3736	4413	(1733)	2672540
3677	16.7	7.4	2.7	chr3	122745411	122746106	(75549453)	+	MER44C	DNA/TcMar-Tigger	3	733	(0)	2672541
14	13.3	2.9	2.8	chr3	123949551	123949585	(74345974)	+	A-rich	Low_complexity	1	36	(0)	2674549
244	36.1	6.0	2.7	chr3	123949743	123950001	(74345558)	+	L2c	LINE/L2	3086	3353	(34)	2674550
16	14.6	0.0	6.8	chr3	123961449	123961492	(74334067)	+	G-rich	Low_complexity	1	44	(0)	2674568
20	10.1	0.0	0.0	chr3	124033192	124033223	(74262336)	+	(GGC)n	Simple_repeat	1	32	(0)	2674684
47	22.1	1.7	0.0	chr3	124033219	124033333	(74262226)	+	GA-rich	Low_complexity	1	117	(0)	2674685
16	9.0	0.0	9.3	chr3	124033430	124033472	(74262087)	+	(GCCCCG)n	Simple_repeat	1	43	(0)	2674686
2215	12.0	0.0	0.3	chr3	125358035	125358335	(72937224)	+	AluSx1	SINE/Alu	6	305	(7)	2676848
193	18.2	0.0	0.0	chr3	125370409	125370441	(72925118)	C	L2a	LINE/L2	(2)	3424	3392	2676870
4634	17.1	1.7	2.3	chr3	126400778	126401365	(71894194)	+	L1MB4	LINE/L1	5582	6180	(0)	2678529
12	11.1	6.9	0.0	chr3	126477041	126477069	(71818490)	+	(CCCAC)n	Simple_repeat	1	31	(0)	2678641
271	36.9	5.7	5.4	chr3	126477071	126477385	(71818174)	+	L2c	LINE/L2	3072	3387	(0)	2678642
258	36.3	3.5	9.5	chr3	126703553	126703890	(71591669)	+	L2b	LINE/L2	3058	3374	(1)	2678968
599	30.1	7.1	7.7	chr3	127224091	127224569	(71070990)	+	HAL1	LINE/L1	2	477	(2030)	2679707
2582	26.5	11.9	5.4	chr3	127224597	127224705	(71070854)	+	HAL1	LINE/L1	568	686	(1821)	2679707
1844	18.2	8.9	1.9	chr3	127241305	127241787	(71053772)	+	MLT2B4	LTR/ERVL	1	517	(3)	2679738
40	45.7	0.0	0.0	chr3	127574847	127575070	(70720489)	+	(TGTG)n	Simple_repeat	1	224	(0)	2680295
57	32.7	2.6	4.3	chr3	127575071	127575087	(70720472)	+	(GTATGT)n	Simple_repeat	295	350	(0)	2680294
189	25.0	0.0	2.0	chr3	127790643	127790691	(70504868)	C	L2c	LINE/L2	(53)	3334	3287	2680677
2321	9.6	1.3	0.0	chr3	128739788	128740089	(69555470)	+	AluSp	SINE/Alu	1	306	(7)	2682367
1948	10.4	0.0	3.6	chr3	128740091	128740370	(69555189)	+	AluSc	SINE/Alu	1	270	(39)	2682368
227	30.8	13.9	4.9	chr3	128784188	128784494	(69511065)	+	L2	LINE/L2	2433	2771	(648)	2682461
19	25.0	0.0	0.0	chr3	129160917	129160965	(69134594)	+	(CGCC)n	Simple_repeat	1	49	(0)	2683173
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
14	10.7	0.0	5.9	chr3	129314486	129314519	(68981040)	+	(CCCTCC)n	Simple_repeat	1	34	(0)	2683537
1451	25.6	12.8	7.2	chr3	134246345	134247236	(64048323)	+	HAL1	LINE/L1	1252	2211	(296)	2691128
656	30.7	13.9	5.6	chr3	136173232	136174215	(62121344)	+	L2c	LINE/L2	2308	3387	(0)	2693895
2106	9.6	6.6	5.8	chr3	138642595	138642970	(59652589)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	2697858
4908	21.2	2.3	8.4	chr3	138642971	138643306	(59652253)	C	L1PB	LINE/L1	(2249)	3897	3562	2697855
18	17.6	6.7	0.0	chr3	138834892	138834936	(59460623)	+	(GC)n	Simple_repeat	1	48	(0)	2698265
2369	11.2	0.0	0.3	chr3	138903885	138904195	(59391364)	+	AluSz	SINE/Alu	1	310	(2)	2698477
1571	17.8	1.4	10.3	chr3	138904196	138904338	(59391221)	C	L1MC3	LINE/L1	(62)	7723	7591	2698476
839	23.7	0.0	1.8	chr3	138904339	138904507	(59391052)	C	AluJr4	SINE/Alu	(10)	302	137	2698478
1571	17.8	1.4	10.3	chr3	138904508	138904524	(59391035)	C	L1MC3	LINE/L1	(195)	7590	7590	2698476
2294	10.5	0.3	0.0	chr3	138904525	138904818	(59390741)	C	AluSg	SINE/Alu	(15)	295	1	2698479
17	11.2	0.0	0.0	chr3	138914877	138914905	(59380654)	+	(GGAT)n	Simple_repeat	1	29	(0)	2698508
606	28.6	10.8	2.7	chr3	138915037	138915334	(59380225)	+	L2a	LINE/L2	3094	3418	(8)	2698509
2659	29.6	11.1	3.9	chr3	139906201	139907072	(58388487)	+	L2b	LINE/L2	421	1302	(2117)	2700038
1342	26.3	7.6	2.3	chr3	140128385	140128855	(58166704)	C	LTR33	LTR/ERVL	(2)	513	16	2700363
137	1.4	1.4	1.4	chr3	141191273	141191416	(57104143)	+	(ATGG)n	Simple_repeat	1	146	(0)	2701930
15	29.5	0.0	0.0	chr3	141191426	141191475	(57104084)	+	(TGGA)n	Simple_repeat	1	50	(0)	2701931
328	25.7	7.1	8.7	chr3	141191535	141191649	(57103910)	+	L2c	LINE/L2	3275	3387	(0)	2701932
190	32.6	1.1	0.0	chr3	141191677	141191764	(57103795)	+	MIRb	SINE/MIR	88	177	(91)	2701933
2071	14.2	0.0	1.3	chr3	141645371	141645680	(56649879)	C	AluJb	SINE/Alu	(6)	306	1	2702624
14455	12.6	2.8	1.4	chr3	142285641	142288065	(56007494)	+	HUERS-P3b-int	LTR/ERV1	4489	6946	(472)	2703887
991	11.2	1.2	1.2	chr3	142288073	142288244	(56007315)	+	PABL_A-int	LTR/ERV1	2388	2559	(2456)	2703888
1211	13.6	0.5	0.0	chr3	142288401	142288598	(56006961)	+	HUERS-P3b-int	LTR/ERV1	8721	8919	(0)	2703887
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
913	19.8	3.7	3.2	chr3	142595960	142596147	(55699412)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2704383
12	31.9	3.2	0.0	chr3	142596364	142596425	(55699134)	+	G-rich	Low_complexity	1	64	(0)	2704384
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
381	31.6	9.6	3.0	chr3	148309172	148309504	(49986055)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	215	2711960
786	11.0	16.8	4.7	chr3	148309506	148309677	(49985882)	C	MER20	DNA/hAT-Charlie	(6)	213	17	2711961
508	29.8	10.1	1.8	chr3	148309698	148309861	(49985698)	C	MLT1H1	LTR/ERVL-MaLR	(353)	202	24	2711960
3765	7.1	0.6	4.0	chr3	148753232	148753759	(49541800)	C	LTR10F	LTR/ERV1	(0)	511	2	2712520
181	15.7	1.8	0.6	chr3	150796560	150796892	(47498667)	+	(TTC)n	Simple_repeat	1	339	(0)	2715871
1769	15.6	0.0	1.8	chr3	150796893	150797168	(47498391)	C	AluSz	SINE/Alu	(39)	273	3	2715872
286	31.6	5.1	1.3	chr3	152718867	152719017	(45576542)	C	Tigger15a	DNA/TcMar-Tigger	(141)	574	418	2718575
26	0.0	0.0	0.0	chr3	153210292	153210316	(45085243)	+	(T)n	Simple_repeat	1	25	(0)	2719435
1747	13.8	0.3	10.3	chr3	155086796	155087136	(43208423)	C	AluJo	SINE/Alu	(5)	307	1	2722024
1133	15.2	0.5	0.0	chr3	155270589	155270786	(43024773)	+	L1PBa	LINE/L1	2	200	(6663)	2722258
9661	11.7	5.2	2.4	chr3	155270791	155273015	(43022544)	+	L1PBa	LINE/L1	834	3105	(3757)	2722258
263	33.2	8.1	7.7	chr3	156535434	156535903	(41759656)	+	L2	LINE/L2	2282	2753	(666)	2724171
13	10.4	6.5	0.0	chr3	157436845	157436875	(40858684)	+	(CTCTCA)n	Simple_repeat	1	33	(0)	2725503
1324	31.2	7.3	3.8	chr3	157475517	157477024	(40818535)	+	ERV3-16A3_I-int	LTR/ERVL	3458	5048	(178)	2725560
15	3.6	6.5	3.0	chr3	158727858	158727888	(39567671)	+	(CACTC)n	Simple_repeat	1	33	(0)	2727194
12	11.8	4.8	6.8	chr3	158791284	158791325	(39504234)	+	(TTTTC)n	Simple_repeat	1	44	(0)	2727306
596	18.2	1.4	0.0	chr3	158791457	158791563	(39503996)	C	LTR41	LTR/ERVL	(587)	181	82	2727307
13	18.9	2.8	0.0	chr3	159763190	159763225	(38532334)	+	GA-rich	Low_complexity	1	37	(0)	2728698
239	35.4	6.6	0.0	chr3	160027640	160027766	(38267793)	+	MIR	SINE/MIR	14	149	(113)	2729143
805	18.7	0.0	0.8	chr3	160027767	160027900	(38267659)	+	AluJb	SINE/Alu	1	133	(179)	2729144
235	20.4	9.3	6.7	chr3	160449195	160449299	(37846260)	+	MIR	SINE/MIR	59	166	(96)	2729796
1775	19.9	0.0	1.4	chr3	161019202	161019497	(37276062)	C	AluJr	SINE/Alu	(20)	292	1	2730706
414	17.9	7.0	1.9	chr3	161220869	161220976	(37074583)	C	L2a	LINE/L2	(1)	3425	3312	2731017
984	12.8	1.7	2.3	chr3	163916006	163916181	(34379378)	+	MER30	DNA/hAT-Charlie	56	230	(0)	2734324
1784	17.5	2.5	6.7	chr3	163916202	163916672	(34378887)	+	MLT2A2	LTR/ERVL	1	455	(99)	2734325
17039	22.6	3.1	2.9	chr3	164020263	164025721	(34269838)	C	HERVFH21-int	LTR/ERV1	(1845)	5405	4	2734444
714	13.9	5.0	0.0	chr3	170182016	170182130	(28113429)	+	AluJr	SINE/Alu	5	125	(187)	2742510
20	12.6	2.1	4.2	chr3	170182138	170182184	(28113375)	+	(AAT)n	Simple_repeat	1	48	(0)	2742511
809	26.0	12.5	6.7	chr3	170397386	170397450	(27898109)	C	MLT1F	LTR/ERVL-MaLR	(1)	547	490	2742963
724	19.8	0.0	10.2	chr3	170397451	170397627	(27897932)	+	FRAM	SINE/Alu	1	159	(17)	2742964
809	25.3	15.7	4.7	chr3	170397628	170398044	(27897515)	C	MLT1F	LTR/ERVL-MaLR	(59)	489	6	2742963
3742	16.0	2.4	1.4	chr3	170959902	170960398	(27335161)	+	L1M1	LINE/L1	1968	2476	(5089)	2743846
2292	11.3	0.0	0.3	chr3	170960399	170960700	(27334859)	+	AluSg4	SINE/Alu	1	301	(9)	2743847
628	30.0	13.8	4.9	chr3	171346461	171347182	(26948377)	C	L2b	LINE/L2	(21)	3354	2548	2744377
20	16.5	0.0	0.0	chr3	171347222	171347255	(26948304)	+	A-rich	Low_complexity	1	34	(0)	2744378
841	18.9	0.0	0.0	chr3	171848162	171848320	(26447239)	C	MER5A1	DNA/hAT-Charlie	(5)	161	3	2745179
230	28.3	3.4	1.7	chr3	171848485	171848560	(26446999)	+	MER112	DNA/hAT-Charlie	11	90	(171)	2745180
51	2.0	0.0	0.0	chr3	171848561	171848611	(26446948)	+	(ATAGA)n	Simple_repeat	1	51	(0)	2745181
230	28.3	3.4	1.7	chr3	171848612	171848623	(26446936)	+	MER112	DNA/hAT-Charlie	91	102	(159)	2745180
29	5.7	0.0	0.0	chr3	171848624	171848660	(26446899)	+	(GAGTG)n	Simple_repeat	1	37	(0)	2745182
230	28.3	3.4	1.7	chr3	171848661	171848685	(26446874)	+	MER112	DNA/hAT-Charlie	103	127	(134)	2745180
378	27.7	10.6	2.8	chr3	171944483	171944692	(26350867)	C	MIRc	SINE/MIR	(17)	251	26	2745328
317	34.9	9.4	3.6	chr3	172729642	172729861	(25565698)	+	MamGypLTR1b	LTR/Gypsy	346	579	(203)	2746597
445	30.4	0.0	0.0	chr3	172865196	172865333	(25430226)	C	MER91B	DNA/hAT-Tip100	(33)	157	20	2746830
198	30.0	10.4	0.0	chr3	177250348	177250467	(21045092)	C	L2	LINE/L2	(584)	2835	2702	2752891
560	26.7	9.8	13.2	chr3	177250471	177250552	(21045007)	C	L1MEh	LINE/L1	(761)	1704	1634	2752892
680	20.9	2.3	0.0	chr3	177250553	177250681	(21044878)	+	FLAM_A	SINE/Alu	1	132	(10)	2752893
560	26.3	10.1	13.4	chr3	177250682	177250890	(21044669)	C	L1MEh	LINE/L1	(832)	1633	1434	2752892
428	25.4	10.8	3.4	chr3	177358979	177359157	(20936402)	C	MIRb	SINE/MIR	(70)	198	5	2753123
1298	19.4	10.8	0.9	chr3	177556367	177556700	(20738859)	C	MER31A	LTR/ERV1	(0)	543	110	2753449
2096	17.1	3.1	3.5	chr3	177556703	177557258	(20738301)	+	MLT2A2	LTR/ERVL	3	554	(0)	2753450
16	16.4	2.2	4.3	chr3	181711744	181711788	(16583771)	+	(CCT)n	Simple_repeat	1	46	(0)	2759749
13	16.1	2.5	4.9	chr3	182364969	182365008	(15930551)	+	G-rich	Low_complexity	1	41	(0)	2760930
24537	14.2	4.7	2.0	chr3	183435040	183436435	(14859124)	+	ERVL-B4-int	LTR/ERVL	615	2045	(3669)	2762670
341	32.2	3.8	0.7	chr3	183481669	183481821	(14813738)	C	MIR	SINE/MIR	(6)	256	99	2762749
12	14.4	0.0	0.0	chr3	183636873	183636896	(14658663)	+	(GCC)n	Simple_repeat	1	24	(0)	2763074
507	19.2	5.5	5.5	chr3	183653800	183653909	(14641650)	+	LTR4	LTR/ERV1	506	675	(0)	2763107
255	32.9	5.0	3.3	chr3	183654045	183654258	(14641301)	+	L2-3_Crp	LINE/L2	754	971	(1125)	2763108
1116	25.7	10.8	9.1	chr3	184479008	184479884	(13815675)	C	L1MC4	LINE/L1	(4904)	1311	418	2764712
832	28.9	0.0	1.4	chr3	184480002	184480215	(13815344)	C	L2	LINE/L2	(549)	2870	2660	2764722
1783	12.5	0.4	5.7	chr3	184779599	184779895	(13515664)	+	AluJb	SINE/Alu	1	281	(31)	2765305
272	20.2	7.0	0.0	chr3	184779956	184780034	(13515525)	C	MIRc	SINE/MIR	(150)	118	34	2765304
386	27.0	7.4	5.2	chr3	184780267	184780477	(13515082)	C	X8_LINE	LINE/CR1	(52)	244	29	2765306
265	28.8	5.2	1.4	chr3	185960483	185960556	(12335003)	+	L2c	LINE/L2	2748	2824	(595)	2767458
757	28.1	7.7	3.5	chr3	185960559	185960868	(12334691)	+	L2a	LINE/L2	2758	3081	(338)	2767459
2087	14.3	4.8	2.2	chr3	185960875	185961009	(12334550)	+	THE1C	LTR/ERVL-MaLR	1	137	(238)	2767460
219	36.0	1.1	4.2	chr3	193513539	193513632	(4781927)	C	L2b	LINE/L2	(32)	3355	3237	2779588
981	21.1	8.0	6.3	chr3	194016669	194016952	(4278607)	C	MER33	DNA/hAT-Charlie	(9)	315	27	2780374
807	20.6	5.2	2.0	chr3	194326487	194328036	(3967523)	+	(CA)n	Simple_repeat	1	1630	(0)	2780940
648	25.7	15.4	0.4	chr3	194328516	194328753	(3966806)	+	LTR16E1	LTR/ERVL	259	538	(0)	2780941
13	12.5	0.0	0.0	chr3	196739832	196739857	(1555702)	+	(GCCCC)n	Simple_repeat	1	26	(0)	2785665
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
261	21.2	1.5	2.9	chr3	197030504	197030571	(1264988)	C	MIR3	SINE/MIR	(88)	120	54	2786245
820	19.6	11.1	0.0	chr3	197030691	197030858	(1264701)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2786246
5716	18.9	0.7	0.8	chr3	197243557	197244546	(1051013)	C	HERVIP10FH-int	LTR/ERV1	(392)	4710	3722	2786576
15	25.2	0.0	3.6	chr3	197298664	197298718	(996841)	+	G-rich	Low_complexity	1	55	(0)	2786666
1010	9.2	0.0	5.7	chr3	197949501	197949641	(345918)	C	FLAM_C	SINE/Alu	(10)	133	1	2787876
15	23.0	3.3	3.2	chr3	197949653	197949712	(345847)	+	A-rich	Low_complexity	1	62	(0)	2787877
386	33.7	8.4	6.2	chr4	554549	555000	(189659555)	C	HERV16-int	LTR/ERVL	(3574)	1422	960	2789252
3880	22.8	9.6	2.0	chr4	645595	646622	(189567933)	C	L1MC3	LINE/L1	(4171)	2580	1439	2789348
1063	23.7	9.1	5.8	chr4	646764	646857	(189567698)	C	L1MC3	LINE/L1	(4883)	1162	1080	2789348
2129	12.3	0.3	0.3	chr4	646858	647157	(189567398)	C	AluSx1	SINE/Alu	(12)	300	1	2789364
457	25.9	3.2	0.1	chr4	1475403	1476685	(188737870)	+	(GGAT)n	Simple_repeat	1	1324	(0)	2790234
248	20.9	0.4	0.0	chr4	2283101	2283595	(187930960)	+	(CATC)n	Simple_repeat	1	497	(0)	2791353
391	30.3	12.2	8.3	chr4	2283596	2283861	(187930694)	C	L2c	LINE/L2	(0)	3387	3110	2791354
2207	12.1	1.0	0.0	chr4	2446410	2446689	(187767866)	C	AluSx1	SINE/Alu	(29)	283	1	2791566
225	32.2	13.5	4.1	chr4	2446690	2446771	(187767784)	+	L2a	LINE/L2	3348	3426	(0)	2791565
555	23.9	1.7	1.1	chr4	2446772	2448148	(187766407)	+	(GGAT)n	Simple_repeat	1	1400	(0)	2791568
658	16.1	4.6	0.2	chr4	3609760	3611116	(186603439)	+	(CATC)n	Simple_repeat	1	1419	(0)	2793381
14	23.6	7.3	3.9	chr4	4673268	4673363	(185541192)	+	(CCACGC)n	Simple_repeat	1	103	(0)	2795210
264	30.9	14.8	0.3	chr4	5998641	5998818	(184215737)	+	L2c	LINE/L2	3130	3364	(23)	2797575
349	31.7	8.2	5.5	chr4	6630580	6630763	(183583792)	C	L1MC4	LINE/L1	(3948)	2267	2067	2798774
680	26.9	0.0	0.0	chr4	6631111	6631266	(183583289)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	215	2798776
198	29.2	3.0	6.8	chr4	7103108	7103210	(183111345)	C	MIR3	SINE/MIR	(52)	156	58	2799601
264	26.9	2.8	6.3	chr4	7103178	7103288	(183111267)	+	L2b	LINE/L2	3255	3361	(14)	2799602
23	15.1	0.0	8.6	chr4	7103441	7103510	(183111045)	+	(GCCCC)n	Simple_repeat	1	70	(0)	2799603
444	19.7	2.8	0.1	chr4	7117916	7118883	(183095672)	+	(GATG)n	Simple_repeat	1	995	(0)	2799635
558	16.5	0.2	0.1	chr4	7543264	7544222	(182670333)	+	(CATC)n	Simple_repeat	1	961	(0)	2800298
532	22.5	3.8	0.4	chr4	7613769	7615134	(182599421)	+	(CATC)n	Simple_repeat	1	1418	(0)	2800411
998	21.4	13.6	4.3	chr4	7844128	7844479	(182370076)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2800761
515	29.9	7.4	9.2	chr4	7844480	7844672	(182369883)	+	L2b	LINE/L2	3171	3370	(5)	2800760
863	15.7	14.3	0.0	chr4	8165959	8166162	(182048393)	+	MLT2C1	LTR/ERVL	113	350	(47)	2801339
342	22.6	2.7	0.2	chr4	8166209	8167024	(182047531)	+	(CATC)n	Simple_repeat	1	838	(0)	2801340
505	19.6	2.9	0.0	chr4	8233599	8234645	(181979910)	+	(TCCA)n	Simple_repeat	22	1120	(0)	2801446
235	9.1	2.3	1.8	chr4	8294583	8295012	(181919543)	+	(TCCA)n	Simple_repeat	1	440	(0)	2801550
22	35.1	0.6	5.0	chr4	8295056	8295213	(181919342)	+	(TTCC)n	Simple_repeat	1	159	(0)	2801551
708	26.8	1.1	0.6	chr4	13628381	13628560	(176585995)	C	MIR	SINE/MIR	(10)	252	72	2809600
324	27.8	3.8	2.1	chr4	17614255	17614388	(172600167)	C	MIR3	SINE/MIR	(78)	152	20	2816582
3597	15.2	2.0	1.7	chr4	20160311	20160897	(170053658)	+	ERVL-B4-int	LTR/ERVL	1106	1694	(4020)	2820561
2390	9.0	0.0	0.7	chr4	20463593	20463893	(169750662)	+	AluY	SINE/Alu	1	299	(12)	2821004
249	37.5	3.2	3.2	chr4	20464867	20464990	(169749565)	+	L2c	LINE/L2	3256	3379	(8)	2821005
41	22.4	2.0	0.0	chr4	21534965	21535065	(168679490)	+	(TTCCA)n	Simple_repeat	1	103	(0)	2822651
272	35.6	4.2	0.0	chr4	25631389	25631478	(164583077)	+	L2c	LINE/L2	3287	3380	(7)	2829414
284	33.2	13.5	2.5	chr4	25631481	25631915	(164582640)	C	L2b	LINE/L2	(453)	2966	2477	2829413
518	25.8	11.8	4.1	chr4	26917244	26917437	(163297118)	+	L2a	LINE/L2	3216	3426	(0)	2831823
268	28.1	6.6	6.6	chr4	30842451	30842572	(159371983)	+	L2c	LINE/L2	3266	3387	(0)	2837252
228	33.2	9.2	4.0	chr4	30842637	30842862	(159371693)	C	L2	LINE/L2	(465)	2954	2716	2837253
306	31.5	12.8	1.1	chr4	30842873	30843058	(159371497)	+	L2a	LINE/L2	3216	3426	(0)	2837254
35269	10.2	0.9	1.2	chr4	35339405	35344354	(154870201)	+	HERVL-int	LTR/ERVL	1	4937	(717)	2843317
743	25.4	22.9	3.2	chr4	37826072	37826373	(152388182)	C	L1ME3B	LINE/L1	(1122)	5024	4641	2846761
14	11.7	8.1	0.0	chr4	37826624	37826660	(152387895)	+	(CTCCGC)n	Simple_repeat	1	40	(0)	2846764
338	27.4	11.8	0.7	chr4	40333815	40333991	(149880564)	+	MIR3	SINE/MIR	2	193	(15)	2851778
269	26.9	2.1	10.8	chr4	47913085	47913242	(142301313)	+	Tigger19a	DNA/TcMar-Tigger	120	263	(60)	2862966
243	29.0	2.0	0.0	chr4	47913474	47913558	(142300997)	C	Charlie8	DNA/hAT-Charlie	(2163)	265	183	2862967
14	12.2	0.0	0.0	chr4	48779878	48779904	(141434651)	+	(GCGCC)n	Simple_repeat	1	27	(0)	2864375
326	30.5	8.4	0.6	chr4	48909844	48910018	(141304537)	+	L2c	LINE/L2	3020	3209	(178)	2864616
1174	15.5	0.0	0.6	chr4	48910079	48910252	(141304303)	C	FAM	SINE/Alu	(12)	173	1	2864617
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
3657	14.9	1.0	0.7	chr4	54586540	54587148	(135627407)	C	MER50	LTR/ERV1	(123)	611	1	2869574
13	27.2	3.1	3.0	chr4	61366636	61366700	(128847855)	+	(ATATTT)n	Simple_repeat	1	67	(0)	2879327
42255	9.0	0.8	0.6	chr4	64672449	64678088	(125536467)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2883435
1963	15.5	0.7	0.0	chr4	65872044	65872327	(124342228)	+	AluSx1	SINE/Alu	1	286	(26)	2884937
14	20.5	0.0	5.9	chr4	65872328	65872369	(124342186)	+	(TAA)n	Simple_repeat	3	41	(0)	2884938
7461	25.4	6.0	3.5	chr4	66207874	66210152	(124004403)	C	L1MB8	LINE/L1	(4522)	2345	7	2885343
14582	22.2	3.2	2.4	chr4	66620881	66626039	(123588516)	+	ERVL-B4-int	LTR/ERVL	1	5310	(344)	2885813
3316	13.9	5.4	4.9	chr4	70939605	70940340	(119274215)	C	LTR1A2	LTR/ERV1	(0)	783	42	2891530
596	25.1	4.7	1.7	chr4	72031637	72031829	(118182726)	C	MIR	SINE/MIR	(1)	261	63	2892989
2082	16.2	5.3	2.5	chr4	73051663	73052066	(117162489)	C	MSTC	LTR/ERVL-MaLR	(12)	416	1	2894309
12	4.8	4.5	0.0	chr4	74875081	74875102	(115339453)	+	(ATAA)n	Simple_repeat	1	23	(0)	2896800
362	35.8	7.9	10.7	chr4	74906914	74907267	(115307288)	+	L2b	LINE/L2	3033	3375	(0)	2896844
22501	8.1	0.8	0.4	chr4	75074259	75080389	(115134166)	C	L1PA6	LINE/L1	(18)	6136	5	2897075
331	30.2	8.2	3.6	chr4	78775319	78775541	(111439014)	+	MIRc	SINE/MIR	5	241	(27)	2902731
14	21.7	0.0	2.6	chr4	80266834	80266872	(109947683)	+	(TCC)n	Simple_repeat	1	39	(0)	2904622
12	4.5	4.0	3.9	chr4	80266956	80266980	(109947575)	+	(CAG)n	Simple_repeat	1	26	(0)	2904623
5650	7.9	12.2	0.0	chr4	82338578	82339302	(107875253)	C	LTR12	LTR/ERV1	(0)	826	1	2907447
2203	10.8	0.0	4.0	chr4	82420918	82421240	(107793315)	+	AluSq	SINE/Alu	2	311	(2)	2907597
305	19.8	12.9	4.7	chr4	82439630	82439715	(107774840)	+	MIR	SINE/MIR	101	201	(67)	2907618
408	13.9	1.2	0.0	chr4	82439743	82439821	(107774734)	C	L2	LINE/L2	(740)	2679	2600	2907619
305	33.3	2.4	1.9	chr4	82439823	82440027	(107774528)	C	L2-1_AMi	LINE/L2	(583)	652	447	2907620
459	23.2	2.6	0.0	chr4	82440031	82440142	(107774413)	C	L2	LINE/L2	(1049)	2370	2256	2907621
1543	12.9	0.0	12.2	chr4	82811595	82811880	(107402675)	C	AluJb	SINE/Alu	(53)	259	9	2908278
11313	17.3	1.9	0.7	chr4	84296414	84298781	(105915774)	+	L1MA4A	LINE/L1	3392	5787	(1775)	2910924
27549	2.3	0.0	0.1	chr4	84298781	84304810	(105909745)	+	L1PA2	LINE/L1	127	6152	(3)	2910925
1796	19.0	0.0	0.7	chr4	87391536	87391830	(102822725)	+	AluJo	SINE/Alu	2	294	(18)	2915433
1816	18.8	1.0	0.0	chr4	87472741	87473043	(102741512)	C	AluJo	SINE/Alu	(5)	307	2	2915580
18	20.2	1.8	3.6	chr4	87651547	87651601	(102562954)	+	(TTA)n	Simple_repeat	1	56	(0)	2915875
226	18.2	5.2	3.5	chr4	87651694	87651750	(102562805)	+	L2a	LINE/L2	3369	3426	(0)	2915876
10371	18.4	12.0	5.5	chr4	88071582	88071975	(102142580)	C	L1M4b	LINE/L1	(5498)	1369	949	2916486
1904	18.4	0.0	0.0	chr4	88071976	88072282	(102142273)	C	AluJb	SINE/Alu	(0)	312	1	2916492
17	20.6	0.0	0.0	chr4	88823320	88823358	(101391197)	+	(CTC)n	Simple_repeat	1	39	(0)	2917721
32	8.3	2.0	0.0	chr4	88823366	88823416	(101391139)	+	(CCT)n	Simple_repeat	1	52	(0)	2917722
286	20.7	0.5	0.7	chr4	88913002	88913588	(101300967)	+	GA-rich	Low_complexity	1	590	(0)	2917847
323	24.4	2.5	1.3	chr4	88913612	88913690	(101300865)	+	L2a	LINE/L2	3347	3426	(0)	2917848
2767	13.2	13.2	7.2	chr4	89284675	89285193	(100929362)	+	LTR8A	LTR/ERV1	1	582	(145)	2918417
1153	8.4	4.6	0.0	chr4	89285194	89285360	(100929195)	+	L1PA6	LINE/L1	5980	6154	(0)	2918418
2444	10.3	0.3	0.0	chr4	89755766	89756077	(100458478)	C	AluSp	SINE/Alu	(0)	313	1	2919080
12	23.2	0.0	4.5	chr4	90128267	90128310	(100086245)	+	G-rich	Low_complexity	1	44	(0)	2919579
30	3.5	0.0	0.0	chr4	90128488	90128517	(100086038)	+	(TG)n	Simple_repeat	1	30	(0)	2919580
12566	15.4	2.3	2.8	chr4	94153449	94153527	(96061028)	+	HERVL-int	LTR/ERVL	1119	1201	(4453)	2924552
183	21.4	5.1	12.5	chr4	94153528	94153591	(96060964)	+	L3	LINE/CR1	186	244	(3855)	2924555
12566	15.4	2.3	2.8	chr4	94153592	94154874	(96059681)	+	HERVL-int	LTR/ERVL	1202	2558	(3096)	2924552
16	17.1	0.0	4.7	chr4	94842126	94842168	(95372387)	+	(TTTTAA)n	Simple_repeat	1	43	(0)	2925635
915	28.7	12.1	3.3	chr4	98916478	98916995	(91297560)	+	HAL1	LINE/L1	1309	1878	(629)	2930919
60	0.0	0.0	0.0	chr4	98917084	98917134	(91297421)	+	(AC)n	Simple_repeat	1	51	(0)	2930920
2420	9.4	0.0	0.0	chr4	98930857	98931155	(91283400)	+	AluSx	SINE/Alu	1	299	(13)	2930948
198	32.1	4.9	1.3	chr4	100189147	100189225	(90025330)	C	MIR	SINE/MIR	(133)	129	48	2932747
774	22.6	11.0	3.9	chr4	100189298	100189620	(90024935)	+	L1ME2	LINE/L1	5760	6112	(52)	2932748
869	23.9	17.3	2.6	chr4	101977079	101977421	(88237134)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	8	2935042
270	36.6	9.9	3.0	chr4	102115364	102115560	(88098995)	+	MamSINE1	SINE/tRNA-RTE	17	228	(62)	2935232
214	29.6	2.7	1.4	chr4	102115500	102115571	(88098984)	+	MamRTE1	LINE/RTE-BovB	194	266	(3546)	2935233
15	26.6	0.0	0.0	chr4	102345350	102345394	(87869161)	+	(CTGT)n	Simple_repeat	1	45	(0)	2935547
25045	5.0	0.1	0.3	chr4	102374730	102380899	(87833656)	C	L1PA4	LINE/L1	(0)	6155	2	2935596
18	8.5	0.0	0.0	chr4	102502333	102502357	(87712198)	+	(CT)n	Simple_repeat	1	25	(0)	2935762
457	30.0	6.4	4.0	chr4	102627780	102628053	(87586502)	C	MLT1L	LTR/ERVL-MaLR	(208)	402	122	2935934
326	21.0	39.7	1.4	chr4	102780417	102780573	(87433982)	+	ERVL-E-int	LTR/ERVL	2883	3100	(2567)	2936136
665	27.1	7.3	1.6	chr4	102780625	102780844	(87433711)	+	ERVL-E-int	LTR/ERVL	4873	5167	(590)	2936136
249	32.3	0.0	0.0	chr4	102780859	102780923	(87433632)	+	LTR16D	LTR/ERVL	182	246	(405)	2936139
469	29.2	0.0	0.8	chr4	102780929	102781059	(87433496)	+	LTR16D	LTR/ERVL	521	650	(1)	2936139
378	20.1	18.8	5.2	chr4	102959713	102959850	(87254705)	+	MER5C1	DNA/hAT-Charlie	18	168	(95)	2936423
878	29.4	8.8	6.5	chr4	105620766	105621300	(84593255)	+	MLT1H1	LTR/ERVL-MaLR	5	549	(6)	2939750
2458	13.0	0.3	0.5	chr4	107980550	107980935	(82233620)	+	MER57C1	LTR/ERV1	1	385	(0)	2942777
782	21.5	3.9	2.8	chr4	107980939	107981193	(82233362)	+	MER31-int	LTR/ERV1	3	296	(5891)	2942777
16	0.0	0.0	0.0	chr4	107981231	107981247	(82233308)	+	(A)n	Simple_repeat	1	17	(0)	2942778
2138	12.5	0.7	0.0	chr4	107981269	107981563	(82232992)	+	AluSx1	SINE/Alu	16	312	(0)	2942779
2124	12.5	0.3	2.9	chr4	109527492	109527803	(80686752)	+	AluSx3	SINE/Alu	1	304	(7)	2945134
12	11.1	6.9	0.0	chr4	112170090	112170118	(78044437)	+	(TTTC)n	Simple_repeat	1	31	(0)	2948807
2432	18.1	6.4	4.8	chr4	112170248	112170788	(78043767)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	2948808
201	13.6	4.3	4.3	chr4	112286295	112286340	(77928215)	C	MIRc	SINE/MIR	(118)	150	105	2948980
770	7.9	1.0	0.0	chr4	112286359	112286459	(77928096)	C	AluSx3	SINE/Alu	(4)	307	206	2948981
414	33.8	10.4	3.7	chr4	112494432	112494889	(77719666)	+	L2	LINE/L2	1717	2208	(1211)	2949255
15	0.0	0.0	0.0	chr4	112516023	112516041	(77698514)	+	(CGG)n	Simple_repeat	1	19	(0)	2949285
17	12.1	5.6	0.0	chr4	115113815	115113850	(75100705)	+	(GCT)n	Simple_repeat	1	38	(0)	2952865
7338	9.5	2.3	0.2	chr4	115458253	115459245	(74755310)	C	HERVL-int	LTR/ERVL	(3693)	1961	948	2953273
302	33.2	7.4	7.1	chr4	118835728	118836038	(71378517)	+	L1M4b	LINE/L1	210	521	(6346)	2957575
290	26.1	6.1	0.0	chr4	119300200	119300312	(70914243)	+	MIR	SINE/MIR	60	184	(24)	2958229
2168	3.9	0.0	8.1	chr4	119301143	119301425	(70913130)	+	AluSx1	SINE/Alu	22	281	(31)	2958230
2300	9.3	2.0	0.0	chr4	119465579	119465867	(70748688)	+	AluSq	SINE/Alu	1	295	(18)	2958513
1040	17.0	13.1	4.5	chr4	119465868	119465961	(70748594)	+	AluJr	SINE/Alu	134	245	(67)	2958512
443	22.8	8.7	2.9	chr4	119465974	119466113	(70748442)	C	Charlie18a	DNA/hAT-Charlie	(177)	165	17	2958514
451	28.7	6.4	2.1	chr4	120916426	120916589	(69297966)	+	L1MCc	LINE/L1	2470	2638	(4399)	2960388
2205	24.4	7.6	4.1	chr4	120916609	120917613	(69296942)	+	L2a	LINE/L2	2387	3423	(3)	2960391
14	13.1	11.5	1.7	chr4	121823742	121823793	(68390762)	+	(CAGCC)n	Simple_repeat	1	58	(0)	2961635
3577	9.1	0.8	9.3	chr4	122786288	122786846	(67427709)	+	LTR10F	LTR/ERV1	1	511	(0)	2963020
16	0.0	4.3	0.0	chr4	123505553	123505575	(66708980)	+	(TGA)n	Simple_repeat	1	24	(0)	2964102
20	0.0	0.0	0.0	chr4	123505599	123505620	(66708935)	+	(A)n	Simple_repeat	1	22	(0)	2964103
17	25.9	0.0	1.9	chr4	123505639	123505690	(66708865)	+	(CGC)n	Simple_repeat	1	52	(0)	2964104
17	4.0	0.0	3.6	chr4	127633380	127633407	(62581148)	+	(TTGTT)n	Simple_repeat	1	28	(0)	2969339
797	16.5	0.0	0.0	chr4	128056541	128056655	(62157900)	C	FLAM_A	SINE/Alu	(27)	115	1	2970061
264	33.8	12.9	3.6	chr4	128056680	128057016	(62157539)	+	L2	LINE/L2	2577	2949	(470)	2970062
2317	9.7	1.0	0.0	chr4	128057027	128057345	(62157210)	C	AluSz	SINE/Alu	(0)	312	2	2970063
886	15.2	18.7	2.2	chr4	128387527	128387708	(61826847)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2970676
13	21.9	3.5	5.0	chr4	128393637	128393694	(61820861)	+	GA-rich	Low_complexity	1	60	(0)	2970684
22452	9.0	2.6	0.2	chr4	128398495	128403431	(61811124)	C	L1PA17	LINE/L1	(360)	6507	1451	2970694
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
2058	13.4	1.7	0.0	chr4	129814025	129814307	(60400248)	+	AluSx1	SINE/Alu	1	288	(24)	2972632
99	3.1	0.0	0.0	chr4	129814308	129814407	(60400148)	+	(GAAG)n	Simple_repeat	1	100	(0)	2972633
258	36.7	8.7	0.0	chr4	130062021	130062208	(60152347)	+	PRIMA4-int	LTR/ERV1	2391	2596	(5017)	2972942
1517	16.5	20.8	1.4	chr4	131360906	131361249	(58853306)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2974527
4500	21.4	4.5	2.6	chr4	131361250	131362296	(58852259)	+	L1MC2	LINE/L1	5256	6319	(25)	2974526
26	25.3	0.0	8.2	chr4	137532599	137532639	(52681916)	+	GA-rich	Low_complexity	1	120	(0)	2981785
13	27.6	3.8	3.7	chr4	137532640	137532718	(52681837)	+	G-rich	Low_complexity	1	82	(0)	2981786
12	11.2	6.9	0.0	chr4	137532725	137532753	(52681802)	+	(TCCT)n	Simple_repeat	1	31	(0)	2981787
917	21.5	4.8	9.5	chr4	139214206	139214488	(51000067)	C	MLT1B	LTR/ERVL-MaLR	(121)	269	1	2984188
280	25.8	0.0	0.0	chr4	139214497	139214558	(50999997)	C	L1M5	LINE/L1	(658)	5584	5523	2984189
1152	26.4	12.1	4.9	chr4	139345931	139346322	(50868233)	C	L2	LINE/L2	(1486)	1933	1481	2984490
1873	10.2	10.1	0.0	chr4	139346555	139346820	(50867735)	C	AluSp	SINE/Alu	(17)	296	1	2984492
417	18.9	0.9	1.3	chr4	139607053	139607143	(50607412)	C	L1M4	LINE/L1	(1960)	4186	4092	2984947
17	19.5	0.0	0.0	chr4	139607557	139607587	(50606968)	+	(T)n	Simple_repeat	1	31	(0)	2984948
586	35.0	5.7	0.0	chr4	140013533	140013749	(50200806)	C	MIRb	SINE/MIR	(25)	243	14	2985583
195	32.6	5.0	7.8	chr4	140013800	140013902	(50200653)	+	L2b	LINE/L2	3270	3369	(6)	2985584
15	8.9	0.0	0.0	chr4	140152800	140152823	(50061732)	+	(CCA)n	Simple_repeat	1	24	(0)	2985801
15	22.4	0.0	5.8	chr4	140153131	140153182	(50061373)	+	(GCC)n	Simple_repeat	1	52	(0)	2985802
12	13.7	6.2	0.0	chr4	140154048	140154079	(50060476)	+	(CGCTGC)n	Simple_repeat	1	34	(0)	2985803
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
516	27.1	11.2	0.0	chr4	143381444	143381642	(46832913)	+	MIR	SINE/MIR	12	235	(27)	2990250
2111	15.3	10.8	0.8	chr4	143798102	143798484	(46416071)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	2990765
10756	11.8	3.1	0.2	chr4	143798487	143800067	(46414488)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	4	2990765
18	21.7	2.6	6.2	chr4	145733135	145733212	(44481343)	+	(GCCC)n	Simple_repeat	1	80	(0)	2993328
434	30.4	4.2	1.4	chr4	146977700	146977839	(43236716)	C	MIRb	SINE/MIR	(16)	252	109	2995024
14	4.3	4.2	0.0	chr4	147787233	147787256	(42427299)	+	(TATT)n	Simple_repeat	1	25	(0)	2996235
1022	25.7	15.2	1.7	chr4	151874774	151875501	(38339054)	C	L2a	LINE/L2	(1)	3425	2574	3002106
620	28.8	5.3	3.4	chr4	151875651	151875855	(38338700)	+	MIRb	SINE/MIR	6	214	(54)	3002107
599	27.3	3.8	2.4	chr4	153486408	153486617	(36727938)	C	MLT1L	LTR/ERVL-MaLR	(8)	602	390	3004759
936	17.9	2.6	1.1	chr4	153486963	153487148	(36727407)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3004760
1255	20.6	6.4	4.5	chr4	153564315	153564519	(36650036)	+	MLT1A0	LTR/ERVL-MaLR	155	365	(0)	3004885
247	33.7	15.7	1.4	chr4	153564825	153565228	(36649327)	+	L2c	LINE/L2	2870	3340	(47)	3004887
216	26.8	3.5	0.0	chr4	155392880	155392961	(34821594)	+	L2b	LINE/L2	2146	2230	(1189)	3007350
1989	14.8	0.7	0.0	chr4	155393052	155393349	(34821206)	+	AluJr	SINE/Alu	13	312	(0)	3007351
249	40.1	6.5	3.5	chr4	156773922	156774262	(33440293)	+	L2	LINE/L2	2652	3003	(416)	3009233
265	27.2	4.6	8.8	chr4	156774669	156774781	(33439774)	C	L2b	LINE/L2	(9)	3366	3259	3009234
753	31.4	6.0	1.9	chr4	156922888	156923341	(33291214)	+	L2a	LINE/L2	2651	3122	(304)	3009428
1858	12.1	5.1	6.0	chr4	158998889	158999203	(31215352)	+	AluJb	SINE/Alu	1	312	(0)	3012200
2161	30.8	14.7	6.8	chr4	164407524	164408597	(25805958)	+	L2a	LINE/L2	1343	2556	(870)	3019377
14	26.4	1.4	6.8	chr4	167234628	167234700	(22979855)	+	(CTC)n	Simple_repeat	1	74	(0)	3023323
237	32.7	8.8	1.9	chr4	168649589	168649694	(21564861)	C	MIRb	SINE/MIR	(1)	267	154	3025115
16	13.2	0.0	0.0	chr4	169438650	169438674	(20775881)	+	(A)n	Simple_repeat	1	25	(0)	3026339
1410	30.0	12.7	1.3	chr4	169438689	169439303	(20775252)	+	L2	LINE/L2	678	1372	(2047)	3026340
15	22.4	4.3	0.0	chr4	169791712	169791758	(20422797)	+	(GGCG)n	Simple_repeat	1	49	(0)	3026840
1728	12.3	10.2	7.6	chr4	171521728	171522071	(18692484)	C	MSTC	LTR/ERVL-MaLR	(0)	428	75	3029095
901	15.7	11.4	0.0	chr4	171522074	171522220	(18692335)	C	AluJo	SINE/Alu	(12)	300	135	3029096
1141	15.6	3.2	5.4	chr4	173258920	173259143	(16955412)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3031363
4277	19.1	4.7	0.8	chr4	173260713	173261458	(16953097)	C	MER6	DNA/TcMar-Tigger	(99)	766	3	3031365
15	14.3	5.1	1.2	chr4	173547737	173547781	(16666774)	+	A-rich	Low_complexity	1	46	(0)	3031775
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
28	10.0	0.0	0.0	chr4	182449187	182449230	(7765325)	+	(GCG)n	Simple_repeat	1	44	(0)	3043420
2192	16.7	4.5	0.7	chr4	183195862	183196272	(7018283)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	3044571
13	6.2	7.9	4.9	chr4	183797083	183797120	(6417435)	+	(GAGGTGG)n	Simple_repeat	1	41	(0)	3045633
18	8.5	0.0	0.0	chr4	183987340	183987364	(6227191)	+	(TG)n	Simple_repeat	1	25	(0)	3045898
1875	21.1	5.6	3.5	chr4	185120045	185120495	(5094060)	+	MER65C	LTR/ERV1	1	461	(0)	3047714
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
588	19.8	2.4	0.0	chr5	426008	426128	(181112131)	+	MER63B	DNA/hAT-Blackjack	313	436	(0)	3055415
490	17.8	1.2	0.4	chr5	426194	427129	(181111130)	+	(ATGG)n	Simple_repeat	1	947	(0)	3055416
459	23.2	0.4	0.5	chr5	517017	518019	(181020240)	+	(CATC)n	Simple_repeat	1	1007	(0)	3055481
249	29.5	4.5	5.4	chr5	518023	518133	(181020126)	C	L2a	LINE/L2	(0)	3426	3317	3055482
403	18.9	4.0	1.9	chr5	1418367	1419378	(180118881)	+	(ATCC)n	Simple_repeat	1	1053	(0)	3056230
1742	23.4	8.6	3.6	chr5	5351315	5351949	(176186310)	+	MER21C	LTR/ERVL	8	778	(160)	3060455
700	22.1	4.6	2.9	chr5	5352138	5352309	(176185950)	+	MER21C	LTR/ERVL	722	896	(42)	3060456
2120	12.9	0.0	0.0	chr5	5352378	5352663	(176185596)	+	AluSx1	SINE/Alu	1	286	(26)	3060457
6522	21.1	4.2	1.7	chr5	14101923	14103142	(167435117)	+	L1M4b	LINE/L1	89	1348	(5519)	3071780
3155	23.6	8.4	5.0	chr5	14194783	14195850	(167342409)	C	L1MC4	LINE/L1	(0)	8042	6935	3071911
642	15.8	0.0	0.0	chr5	17304333	17304427	(164233832)	C	MER44B	DNA/TcMar-Tigger	(2)	548	454	3076593
713	19.7	4.1	0.0	chr5	17304429	17304570	(164233689)	C	MER44B	DNA/TcMar-Tigger	(285)	265	118	3076593
427	23.3	2.8	1.0	chr5	20028551	20028654	(161509605)	C	MER44B	DNA/TcMar-Tigger	(0)	550	445	3080115
1135	22.6	3.9	0.0	chr5	20028668	20028888	(161509371)	C	MER44B	DNA/TcMar-Tigger	(321)	229	1	3080115
2162	12.9	0.3	0.7	chr5	23616683	23616992	(157921267)	C	AluSq2	SINE/Alu	(0)	313	5	3085004
2142	29.0	8.7	4.2	chr5	23616993	23617246	(157921013)	C	L1MC4	LINE/L1	(5220)	995	710	3085003
4922	26.7	4.6	6.5	chr5	27965650	27966548	(153571711)	+	L1MB8	LINE/L1	33	955	(5912)	3090570
480	6.1	0.0	0.0	chr5	27966549	27966614	(153571645)	+	L1PA6	LINE/L1	6086	6151	(3)	3090571
4922	26.7	4.6	6.5	chr5	27966615	27967355	(153570904)	+	L1MB8	LINE/L1	956	1640	(5227)	3090570
2142	11.4	2.0	4.5	chr5	32140374	32140681	(149397578)	+	AluSz	SINE/Alu	1	300	(12)	3096242
1309	18.6	10.7	7.9	chr5	32140682	32140819	(149397440)	+	AluJo	SINE/Alu	134	300	(12)	3096241
414	24.5	11.7	6.7	chr5	32140820	32140879	(149397380)	+	HAL1	LINE/L1	1478	1539	(968)	3096240
2323	12.3	0.0	0.3	chr5	32140880	32141180	(149397079)	+	AluSz6	SINE/Alu	1	300	(12)	3096243
45208	6.4	1.7	0.3	chr5	32287596	32293169	(149245090)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3096553
15	22.2	3.7	1.8	chr5	37840055	37840108	(143698151)	+	G-rich	Low_complexity	1	56	(0)	3105101
206	29.1	8.1	2.5	chr5	38265807	38265887	(143272372)	+	MER5A	DNA/hAT-Charlie	97	182	(7)	3105838
664	32.2	10.3	7.3	chr5	38414280	38415059	(143123200)	+	L3	LINE/CR1	3292	4097	(2)	3106098
11	24.1	2.6	0.0	chr5	43603102	43603140	(137935119)	+	G-rich	Low_complexity	1	40	(0)	3113334
24783	5.5	0.0	0.1	chr5	51348668	51354822	(130183437)	+	L1PA4	LINE/L1	3	6153	(2)	3117631
15	22.3	5.8	0.0	chr5	51383440	51383491	(130154768)	+	(GCC)n	Simple_repeat	1	55	(0)	3117662
245	38.3	8.8	5.7	chr5	52805123	52805581	(128732678)	C	L2	LINE/L2	(417)	3002	2528	3119433
12	27.1	0.0	0.0	chr5	52915756	52915795	(128622464)	+	GA-rich	Low_complexity	1	40	(0)	3119590
17	18.6	5.3	6.2	chr5	54517730	54517805	(127020454)	+	(CGG)n	Simple_repeat	1	80	(0)	3121856
844	18.2	0.0	0.0	chr5	56112388	56112519	(125425740)	+	FLAM_C	SINE/Alu	4	135	(8)	3124489
1072	15.3	0.0	0.0	chr5	57024883	57025026	(124513233)	C	FRAM	SINE/Alu	(31)	145	2	3125927
1998	17.1	4.8	1.9	chr5	57025027	57025389	(124512870)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	3125928
226	18.0	7.4	0.0	chr5	58918141	58918190	(122620069)	C	MER94	DNA/hAT-Blackjack	(4)	130	77	3128800
912	19.8	2.4	0.0	chr5	59220236	59220397	(122317862)	+	FRAM	SINE/Alu	1	166	(10)	3129227
242	27.1	2.9	14.1	chr5	59220475	59220672	(122317587)	+	X7A_LINE	LINE/CR1	1	175	(92)	3129228
7734	16.0	3.5	2.0	chr5	60956201	60956651	(120581608)	C	L1M3	LINE/L1	(1832)	4308	3840	3131583
33795	6.8	0.5	0.3	chr5	61908556	61913030	(119625229)	C	HERVL-int	LTR/ERVL	(0)	5654	1171	3132956
468	29.1	9.9	4.8	chr5	62780842	62781068	(118757191)	C	MIRb	SINE/MIR	(14)	254	5	3134359
2720	3.3	0.3	0.0	chr5	62781272	62781572	(118756687)	C	AluY	SINE/Alu	(9)	302	1	3134360
12	16.0	0.0	3.3	chr5	64964399	64964428	(116573831)	+	(TTTAA)n	Simple_repeat	1	30	(0)	3137165
5305	25.2	9.8	2.7	chr5	65716754	65718164	(115820095)	C	L2a	LINE/L2	(1015)	2404	907	3138292
185	30.0	7.2	11.8	chr5	65722782	65722883	(115815376)	C	OldhAT1	DNA/hAT-Ac	(2353)	495	399	3138301
1012	28.6	11.5	1.8	chr5	66754592	66755326	(114782933)	C	L2a	LINE/L2	(0)	3426	2500	3139891
13	15.4	5.6	0.0	chr5	68215681	68215716	(113322543)	+	G-rich	Low_complexity	1	38	(0)	3141939
210	9.4	0.0	0.7	chr5	69013912	69014215	(112524044)	+	(TCTTCT)n	Simple_repeat	1	304	(0)	3143065
2123	15.2	0.7	0.0	chr5	69014216	69014525	(112523734)	C	AluSz	SINE/Alu	(0)	312	1	3143066
5279	18.7	12.3	2.4	chr5	69407852	69408506	(112129753)	C	L1M4b	LINE/L1	(5135)	1732	1073	3143974
2227	11.6	1.0	0.3	chr5	69408507	69408809	(112129450)	C	AluSz	SINE/Alu	(6)	306	2	3143976
5279	18.7	12.3	2.4	chr5	69408810	69409358	(112128901)	C	L1M4b	LINE/L1	(5795)	1072	408	3143974
586	31.5	7.6	8.4	chr5	72661297	72661774	(108876485)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	36	3149319
393	32.1	14.7	0.9	chr5	73641865	73642081	(107896178)	C	MIRb	SINE/MIR	(13)	255	4	3150845
19290	18.0	7.9	6.7	chr5	74786316	74788423	(106749836)	+	HERVL-int	LTR/ERVL	4	2156	(3498)	3152507
12	0.0	8.0	3.7	chr5	75511355	75511379	(106026880)	+	(CCG)n	Simple_repeat	1	27	(0)	3153647
13	8.8	0.0	3.9	chr5	75511436	75511461	(106026798)	+	(GCC)n	Simple_repeat	1	26	(0)	3153648
12	19.5	2.6	2.6	chr5	75511521	75511558	(106026701)	+	A-rich	Low_complexity	1	39	(0)	3153649
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
12	21.2	2.1	4.2	chr5	75656642	75656688	(105881571)	+	G-rich	Low_complexity	1	48	(0)	3153885
12	16.6	0.0	0.0	chr5	77518644	77518670	(104019589)	+	(TTTA)n	Simple_repeat	1	27	(0)	3156761
21888	6.5	1.7	3.0	chr5	78067072	78068042	(103470217)	+	L1PA10	LINE/L1	2605	3579	(2882)	3157562
1346	15.4	10.5	8.2	chr5	79490651	79490929	(102047330)	+	AluJr	SINE/Alu	2	287	(25)	3159829
15	12.6	0.0	0.0	chr5	79490934	79490960	(102047299)	+	(TAAA)n	Simple_repeat	1	27	(0)	3159830
32	0.0	0.0	0.0	chr5	79491076	79491110	(102047149)	+	(A)n	Simple_repeat	1	35	(0)	3159831
1817	15.0	3.0	5.4	chr5	79491149	79491462	(102046797)	+	AluJb	SINE/Alu	1	306	(6)	3159832
2570	7.9	0.3	1.0	chr5	79572981	79573285	(101964974)	C	AluSx4	SINE/Alu	(7)	303	1	3160005
1590	20.1	3.4	11.9	chr5	79573286	79573376	(101964883)	C	LTR49-int	LTR/ERV1	(3621)	1502	1417	3160003
11	12.8	8.7	4.0	chr5	79991100	79991145	(101547114)	+	(CCTGCGC)n	Simple_repeat	1	50	(0)	3160666
184	27.8	18.9	1.5	chr5	79991496	79991630	(101546629)	+	MIR	SINE/MIR	89	252	(10)	3160667
421	32.4	5.4	8.6	chr5	80083550	80083816	(101454443)	+	L2c	LINE/L2	3129	3386	(1)	3160813
27	0.0	0.0	0.0	chr5	80487395	80487420	(101050839)	+	(TTAT)n	Simple_repeat	1	26	(0)	3161654
2062	10.9	0.0	0.4	chr5	80487424	80487699	(101050560)	C	AluSz	SINE/Alu	(37)	275	1	3161655
220	36.6	11.4	0.0	chr5	82278829	82278921	(99259338)	+	MIR	SINE/MIR	2	106	(156)	3164384
2318	11.2	0.0	0.0	chr5	82278930	82279240	(99259019)	C	AluSx1	SINE/Alu	(1)	311	1	3164385
2880	11.4	3.5	2.9	chr5	82969116	82969614	(98568645)	C	LTR10F	LTR/ERV1	(43)	590	1	3165350
1813	9.7	3.8	29.2	chr5	82975612	82976282	(98561977)	C	LTR10F	LTR/ERV1	(16)	495	2	3165353
12	22.1	4.8	0.0	chr5	83471372	83471413	(98066846)	+	G-rich	Low_complexity	1	44	(0)	3166012
16	22.3	0.0	2.3	chr5	83471655	83471698	(98066561)	+	(CCT)n	Simple_repeat	1	44	(0)	3166013
42310	8.2	0.8	1.5	chr5	85245147	85250836	(96287423)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3168301
12751	9.0	4.3	0.6	chr5	89800457	89802253	(91736006)	+	L1PA6	LINE/L1	5	1872	(4312)	3173991
2766	21.6	5.3	10.2	chr5	90207974	90208322	(91329937)	+	L1MB3	LINE/L1	2983	3319	(3063)	3174461
27286	2.9	0.1	0.3	chr5	90208332	90214364	(91323895)	+	L1PA2	LINE/L1	126	6151	(4)	3174463
248	31.3	10.4	3.0	chr5	90410217	90410384	(91127875)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	3174712
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
12	27.1	0.0	2.2	chr5	90529746	90529791	(91008468)	+	G-rich	Low_complexity	1	46	(0)	3174919
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
17	15.2	4.3	2.1	chr5	93582091	93582136	(87956123)	+	(CCTCTC)n	Simple_repeat	1	48	(0)	3178829
16	16.8	0.0	0.0	chr5	93582272	93582299	(87955960)	+	A-rich	Low_complexity	1	28	(0)	3178830
31	3.3	0.0	0.0	chr5	93582772	93582802	(87955457)	+	(GT)n	Simple_repeat	1	31	(0)	3178831
1065	22.1	4.2	3.6	chr5	95222850	95223130	(86315129)	C	MLT2D	LTR/ERVL	(41)	373	91	3180839
2445	28.8	6.8	15.6	chr5	95382558	95383279	(86154980)	C	L2a	LINE/L2	(1495)	1924	1179	3181080
20	19.6	0.0	0.0	chr5	95963708	95963744	(85574515)	+	(T)n	Simple_repeat	1	37	(0)	3181914
22	3.3	0.0	3.0	chr5	96662314	96662346	(84875913)	+	(CCCT)n	Simple_repeat	1	33	(0)	3182909
1371	29.2	11.1	2.8	chr5	96682201	96682810	(84855449)	C	L1M6	LINE/L1	(5138)	1358	675	3182944
240	31.1	10.0	4.1	chr5	96683011	96683328	(84854931)	C	L1M6	LINE/L1	(6029)	467	129	3182944
1088	16.1	0.0	0.0	chr5	99020595	99020756	(82517503)	+	AluJr	SINE/Alu	137	298	(14)	3185926
215	29.6	16.6	0.5	chr5	101678329	101678476	(79859783)	C	MIRc	SINE/MIR	(7)	201	23	3189189
786	15.2	4.5	2.3	chr5	102809236	102809391	(78728868)	+	FLAM_C	SINE/Alu	1	143	(0)	3190601
1613	14.6	2.5	3.9	chr5	105822024	105822304	(75715955)	C	AluJo	SINE/Alu	(35)	277	1	3194316
624	26.3	2.6	0.0	chr5	105822305	105822533	(75715726)	C	L1MEc	LINE/L1	(3941)	2459	2226	3194313
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
14	9.3	0.0	0.0	chr5	107672098	107672120	(73866139)	+	(GCA)n	Simple_repeat	1	23	(0)	3196632
3996	22.1	7.8	2.5	chr5	108372208	108373632	(73164627)	+	L1M4	LINE/L1	1704	3162	(3705)	3197536
3573	15.4	11.0	0.0	chr5	109708547	109709143	(71829116)	C	MLT2B5	LTR/ERVL	(76)	641	2	3199358
1004	12.8	0.0	0.0	chr5	112734794	112734926	(68803333)	C	AluSz6	SINE/Alu	(15)	297	165	3203202
319	27.0	6.2	0.7	chr5	112735022	112735174	(68803085)	C	Charlie15b	DNA/hAT-Charlie	(112)	949	788	3203203
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
775	5.9	0.0	1.0	chr5	115626287	115626387	(65911872)	C	AluSz6	SINE/Alu	(0)	312	213	3207058
700	27.7	7.2	1.4	chr5	115626532	115626754	(65911505)	+	MIR	SINE/MIR	20	256	(6)	3207059
2560	11.5	2.7	0.8	chr5	115929951	115930343	(65607916)	C	LTR10F	LTR/ERV1	(7)	504	104	3207496
1386	11.7	5.1	4.5	chr5	115930368	115930670	(65607589)	C	LTR10F	LTR/ERV1	(306)	303	1	3207497
1521	25.0	7.7	5.3	chr5	116948068	116948637	(64589622)	C	L1MCc	LINE/L1	(5817)	606	22	3208918
17	0.0	0.0	0.0	chr5	116948638	116948656	(64589603)	+	(TG)n	Simple_repeat	1	19	(0)	3208919
337	34.6	3.0	2.6	chr5	116948667	116948930	(64589329)	C	L1M6	LINE/L1	(1301)	5099	4835	3208914
282	29.1	16.0	3.8	chr5	118987716	118987901	(62550358)	C	L2	LINE/L2	(1028)	2391	2179	3211602
8797	17.9	1.1	1.2	chr5	119255193	119256832	(62281427)	+	L1PBa1	LINE/L1	1541	3272	(4883)	3212059
227	28.6	1.1	2.1	chr5	119453232	119453324	(62084935)	C	MER102b	DNA/hAT-Charlie	(0)	341	250	3212327
1543	30.7	8.1	5.9	chr5	119749172	119750307	(61787952)	+	L2a	LINE/L2	2242	3421	(5)	3212716
3805	19.5	4.0	1.6	chr5	124078229	124078963	(57459296)	C	L1MA5A	LINE/L1	(6033)	756	4	3218182
857	18.6	21.3	3.2	chr5	124480828	124480983	(57057276)	+	L1ME3	LINE/L1	5922	6152	(12)	3218711
226	34.7	8.3	1.5	chr5	124481017	124481218	(57057041)	C	L2c	LINE/L2	(144)	3243	3027	3218713
15	3.4	2.8	8.1	chr5	125107220	125107255	(56431004)	+	(AGAAAT)n	Simple_repeat	1	37	(0)	3219627
228	36.0	1.6	14.3	chr5	125107467	125107683	(56430576)	C	MIR3	SINE/MIR	(4)	204	16	3219628
4298	18.7	14.8	1.2	chr5	126265376	126266300	(55271959)	+	LTR27E	LTR/ERV1	1	1073	(4)	3220958
504	26.4	1.4	0.0	chr5	126595497	126595640	(54942619)	C	MER5A1	DNA/hAT-Charlie	(0)	166	21	3221484
387	20.7	5.1	0.3	chr5	126600436	126600565	(54937694)	C	MER2B	DNA/TcMar-Tigger	(0)	336	97	3221498
13	17.7	5.3	0.0	chr5	127290221	127290258	(54248001)	+	(CCACCCT)n	Simple_repeat	1	40	(0)	3222643
26414	2.6	0.1	0.1	chr5	127747108	127753135	(53785124)	C	L1PA3	LINE/L1	(0)	6155	128	3223230
346	31.6	10.6	0.4	chr5	128131227	128131376	(53406883)	C	L2a	LINE/L2	(2)	3424	3206	3223778
2144	7.7	0.0	12.1	chr5	128131382	128131719	(53406540)	+	AluY	SINE/Alu	1	297	(14)	3223779
2058	23.2	12.7	1.5	chr5	131205016	131205939	(50332320)	C	L1ME3Cz	LINE/L1	(7)	990	2	3227537
13290	12.8	4.3	8.1	chr5	131627675	131629499	(49908760)	+	Tigger1	DNA/TcMar-Tigger	1	1740	(678)	3228289
17	13.1	0.0	0.0	chr5	132962795	132962820	(48575439)	+	(T)n	Simple_repeat	1	26	(0)	3230228
1278	26.4	11.8	4.5	chr5	133174401	133174564	(48363695)	C	L1ME3Cz	LINE/L1	(1338)	4808	4592	3230670
1981	15.9	4.0	1.5	chr5	133174565	133174902	(48363357)	+	Tigger3a	DNA/TcMar-Tigger	2	348	(0)	3230672
231	36.1	2.0	4.5	chr5	135395543	135395742	(46142517)	+	Eulor2B	DNA?	74	268	(5)	3234228
180	37.4	1.0	0.0	chr5	136150565	136150663	(45387596)	C	L2c	LINE/L2	(216)	3171	3072	3235304
338	29.4	6.9	0.6	chr5	137220410	137220573	(44317686)	C	MIR	SINE/MIR	(7)	255	81	3236666
187	27.9	3.2	0.0	chr5	137220645	137220705	(44317554)	+	L2c	LINE/L2	3281	3343	(44)	3236667
2496	15.4	3.3	0.5	chr5	137331448	137331857	(44206402)	C	MSTB	LTR/ERVL-MaLR	(4)	422	1	3236816
15	18.1	0.0	0.0	chr5	137754305	137754336	(43783923)	+	(GCC)n	Simple_repeat	1	32	(0)	3237464
299	27.8	14.2	1.2	chr5	138470322	138470492	(43067767)	C	L2c	LINE/L2	(104)	3283	3087	3238924
2498	4.4	2.0	0.3	chr5	138576175	138576467	(42961792)	+	AluY	SINE/Alu	1	298	(13)	3239129
1018	24.1	2.3	3.1	chr5	139025270	139025527	(42512732)	+	MIR	SINE/MIR	5	261	(1)	3239972
578	30.0	9.3	2.9	chr5	139025526	139025777	(42512482)	+	L2c	LINE/L2	2812	3076	(343)	3239973
1255	20.4	0.9	0.0	chr5	139025778	139025998	(42512261)	C	MER58A	DNA/hAT-Charlie	(1)	223	1	3239974
774	33.5	9.7	4.4	chr5	139162695	139163238	(42375021)	C	L2b	LINE/L2	(2)	3373	2820	3240189
1450	17.2	10.3	0.8	chr5	139580103	139580364	(41957895)	C	AluJb	SINE/Alu	(22)	290	1	3241096
1110	18.1	2.3	8.7	chr5	139580365	139580465	(41957794)	+	AluJr	SINE/Alu	27	122	(190)	3241097
2130	9.0	5.4	0.0	chr5	139580466	139580744	(41957515)	C	AluSc8	SINE/Alu	(16)	295	1	3241098
14	8.2	0.0	3.6	chr5	139648486	139648513	(41889746)	+	(CCCAG)n	Simple_repeat	1	28	(0)	3241243
14	9.6	0.0	0.0	chr5	139648803	139648825	(41889434)	+	(GCG)n	Simple_repeat	1	23	(0)	3241244
13	33.9	1.5	0.0	chr5	139648864	139648892	(41889367)	+	(CCCTCC)n	Simple_repeat	1	66	(0)	3241245
13	12.1	8.3	0.0	chr5	139648893	139648928	(41889331)	+	(CCCCT)n	Simple_repeat	1	39	(0)	3241246
1467	7.3	3.0	0.0	chr5	140638858	140639049	(40899210)	+	MER4B	LTR/ERV1	569	766	(0)	3242976
21	24.2	0.0	8.7	chr5	140639334	140639436	(40898823)	+	(GCCCC)n	Simple_repeat	1	103	(0)	3242980
695	12.5	1.8	0.0	chr5	140711450	140711561	(40826698)	+	L1MC3	LINE/L1	6747	6860	(925)	3243113
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
600	28.2	9.3	8.9	chr5	140720237	140720495	(40817764)	C	L1MC4	LINE/L1	(5386)	829	560	3243123
1482	14.5	2.9	11.2	chr5	140720496	140720833	(40817426)	C	AluSz6	SINE/Alu	(3)	309	1	3243138
600	28.2	9.3	8.9	chr5	140720834	140721106	(40817153)	C	L1MC4	LINE/L1	(5656)	559	305	3243123
3616	10.2	0.8	4.5	chr5	143088591	143089121	(38449138)	C	LTR10F	LTR/ERV1	(0)	511	1	3247156
550	30.2	9.4	2.5	chr5	148805510	148805826	(32732433)	C	MER102b	DNA/hAT-Charlie	(2114)	314	1	3256473
2341	10.7	0.0	0.0	chr5	149326258	149326566	(32211693)	+	AluSz6	SINE/Alu	2	310	(2)	3257480
8083	16.2	6.0	4.3	chr5	149326567	149327243	(32211016)	+	L1M4b	LINE/L1	917	1582	(5285)	3257478
401	31.0	4.1	0.8	chr5	149780372	149780545	(31757714)	+	MIR3	SINE/MIR	16	200	(8)	3258530
2005	12.5	1.3	0.0	chr5	149804392	149804688	(31733571)	+	AluSz	SINE/Alu	1	301	(11)	3258583
220	30.0	10.1	0.0	chr5	149804825	149804994	(31733265)	C	L2a	LINE/L2	(404)	3015	2827	3258582
534	31.2	8.0	2.4	chr5	151449591	151449885	(30088374)	+	L3	LINE/CR1	3785	4097	(2)	3261889
2336	7.9	2.4	0.0	chr5	154825378	154825668	(26712591)	+	AluSg	SINE/Alu	1	298	(12)	3268120
603	24.5	0.0	8.3	chr5	154825669	154825788	(26712471)	C	L2a	LINE/L2	(184)	3242	3193	3268117
448	30.2	4.5	6.2	chr5	154825794	154826199	(26712060)	C	L2-1_AMi	LINE/L2	(577)	658	260	3268121
401	23.1	7.2	5.8	chr5	157511313	157511450	(24026809)	C	MIRb	SINE/MIR	(121)	147	8	3272814
295	20.8	2.0	3.0	chr5	157511528	157511626	(24026633)	+	UCON37	Unknown	42	139	(4)	3272815
67	3.8	4.2	4.1	chr5	157668477	157668594	(23869665)	+	(CATC)n	Simple_repeat	1	123	(0)	3273129
181	29.7	12.9	0.0	chr5	157668697	157668770	(23869489)	+	MIR3	SINE/MIR	34	118	(90)	3273130
380	29.3	2.8	3.5	chr5	157668779	157668923	(23869336)	C	MIR3	SINE/MIR	(24)	184	41	3273131
361	28.0	1.1	1.1	chr5	157668927	157669020	(23869239)	+	MIRc	SINE/MIR	132	225	(43)	3273132
636	29.8	10.8	6.9	chr5	158013902	158014449	(23523810)	C	MamGypLTR3	LTR/Gypsy	(55)	839	268	3273844
13	17.6	0.0	0.0	chr5	158014495	158014521	(23523738)	+	(AGT)n	Simple_repeat	1	27	(0)	3273846
14	15.2	0.0	7.1	chr5	158957958	158957999	(22580260)	+	A-rich	Low_complexity	1	42	(0)	3275369
2234	12.3	1.7	1.3	chr5	159077155	159077454	(22460805)	+	AluSq2	SINE/Alu	3	303	(10)	3275524
678	22.5	20.3	1.5	chr5	159077455	159077655	(22460604)	+	L2a	LINE/L2	3158	3425	(1)	3275519
1897	13.4	5.6	2.4	chr5	159077746	159078037	(22460222)	C	AluJb	SINE/Alu	(8)	304	3	3275525
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
30	20.1	0.0	0.0	chr5	159099518	159099575	(22438684)	+	A-rich	Low_complexity	1	58	(0)	3275546
206	34.7	9.7	2.4	chr5	159757238	159757485	(21780774)	+	L2	LINE/L2	1612	1879	(1540)	3276662
215	36.7	7.1	6.7	chr5	159757626	159758072	(21780187)	+	L2	LINE/L2	2148	2596	(823)	3276662
13	31.6	3.2	0.0	chr5	160119325	160119386	(21418873)	+	(CGC)n	Simple_repeat	1	64	(0)	3277395
285	22.2	2.9	4.6	chr5	160120031	160120127	(21418132)	C	L2a	LINE/L2	(8)	3418	3292	3277396
743	25.0	15.8	2.6	chr5	168612284	168612632	(12925627)	C	HAL1	LINE/L1	(800)	1707	1304	3290417
228	33.3	0.0	0.0	chr5	168612643	168612705	(12925554)	+	Tigger13a	DNA/TcMar-Tigger	1	63	(708)	3290418
850	24.2	16.5	3.7	chr5	168612707	168613080	(12925179)	+	Tigger13a	DNA/TcMar-Tigger	226	656	(115)	3290419
2384	23.2	6.5	1.8	chr5	168613092	168613359	(12924900)	+	L1MC4	LINE/L1	7316	7588	(454)	3290420
504	9.5	1.9	1.9	chr5	170754116	170755039	(10783220)	+	(TGGA)n	Simple_repeat	1	942	(0)	3294247
405	21.1	33.2	0.6	chr5	171416561	171416832	(10121427)	+	L1ME1	LINE/L1	5771	6135	(44)	3295239
13	21.0	5.9	1.9	chr5	172283505	172283555	(9254704)	+	G-rich	Low_complexity	1	54	(0)	3297091
12	17.1	3.8	7.3	chr5	172283768	172283820	(9254439)	+	(CGCTC)n	Simple_repeat	1	55	(0)	3297092
14	24.9	1.3	6.6	chr5	172284016	172284090	(9254169)	+	(CCCCGGC)n	Simple_repeat	1	76	(0)	3297093
29	27.4	4.1	3.3	chr5	172284162	172284320	(9253939)	+	GA-rich	Low_complexity	1	160	(0)	3297094
46	22.0	4.1	0.0	chr5	172718507	172718627	(8819632)	+	(GATG)n	Simple_repeat	1	126	(0)	3298041
321	8.3	0.0	2.6	chr5	172718635	172719133	(8819126)	+	(TGGA)n	Simple_repeat	1	499	(0)	3298042
582	25.9	0.0	2.7	chr5	172777966	172778112	(8760147)	C	MIRb	SINE/MIR	(42)	226	84	3298170
655	16.1	4.1	0.0	chr5	172778569	172778686	(8759573)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	268	3298171
403	21.2	0.9	0.1	chr5	173284361	173285203	(8253056)	+	(CATC)n	Simple_repeat	1	851	(0)	3299341
230	22.1	11.5	0.0	chr5	173332143	173332219	(8206040)	+	Tigger16a	DNA/TcMar-Tigger	97	183	(774)	3299416
317	27.6	18.0	0.7	chr5	174082568	174082709	(7455550)	+	MIRb	SINE/MIR	69	240	(28)	3300822
357	31.0	2.5	0.0	chr5	174082802	174082917	(7455342)	+	L2	LINE/L2	2710	2828	(591)	3300823
99	21.9	0.9	1.7	chr5	174347272	174347503	(7190756)	+	(TGGA)n	Simple_repeat	1	234	(0)	3301333
1652	22.4	11.2	2.2	chr5	174378454	174378956	(7159303)	C	MLT1F2	LTR/ERVL-MaLR	(6)	554	1	3301394
407	32.5	3.5	3.1	chr5	174379210	174379463	(7158796)	+	MER121	DNA/hAT?	76	330	(71)	3301395
193	27.9	0.0	0.0	chr5	174380255	174380297	(7157962)	+	MIRb	SINE/MIR	134	176	(92)	3301397
97	17.2	0.0	0.0	chr5	174380416	174380589	(7157670)	+	(TCCA)n	Simple_repeat	1	174	(0)	3301398
13	32.4	1.6	0.0	chr5	174502465	174502525	(7035734)	+	(CCCAC)n	Simple_repeat	1	62	(0)	3301605
208	28.4	8.2	1.9	chr5	174502697	174502814	(7035445)	+	L2b	LINE/L2	3198	3333	(54)	3301606
553	28.0	5.0	0.1	chr5	174505443	174505625	(7032634)	C	MIR	SINE/MIR	(48)	220	31	3301613
180	36.4	5.0	5.0	chr5	174532514	174532652	(7005607)	C	MIR	SINE/MIR	(101)	161	23	3301677
589	23.9	10.6	0.0	chr5	174532863	174533016	(7005243)	+	MER45A	DNA/hAT-Tip100	4	178	(0)	3301678
2036	21.1	2.8	7.1	chr5	176376617	176377140	(5161119)	C	MER57A-int	LTR/ERV1	(1351)	4836	4336	3305123
2577	25.2	2.3	5.2	chr5	176377199	176377758	(5160501)	C	MER57A-int	LTR/ERV1	(1911)	4276	3872	3305126
2289	25.7	14.6	7.6	chr5	177317094	177318607	(4219652)	C	MER21-int	LTR/ERVL	(1106)	3085	1452	3307164
12	19.6	0.0	0.0	chr5	177426628	177426656	(4111603)	+	G-rich	Low_complexity	1	29	(0)	3307400
22	6.4	0.0	0.0	chr5	177426737	177426769	(4111490)	+	(CGAGC)n	Simple_repeat	1	33	(0)	3307401
412	12.7	4.9	1.3	chr5	178244920	178245737	(3292522)	+	(ATCC)n	Simple_repeat	1	858	(0)	3308860
305	30.5	3.3	2.5	chr5	178245742	178245862	(3292397)	C	L2b	LINE/L2	(4)	3371	3250	3308861
280	10.2	1.9	1.8	chr5	178269288	178269823	(3268436)	+	(CATC)n	Simple_repeat	1	546	(0)	3308906
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2211	12.9	0.3	0.0	chr5	178716797	178717107	(2821152)	+	AluSx	SINE/Alu	1	312	(0)	3309690
884	30.1	20.0	7.9	chr5	178717108	178718054	(2820205)	C	L2a	LINE/L2	(482)	2937	1842	3309689
13	15.7	9.3	0.0	chr5	179550804	179550846	(1987413)	+	(GCGCGCT)n	Simple_repeat	1	47	(0)	3311067
483	30.9	11.7	0.0	chr5	179658611	179658791	(1879468)	C	L1MC	LINE/L1	(2230)	5652	5448	3311285
267	18.5	18.2	0.0	chr5	179798779	179798859	(1739400)	C	MIR	SINE/MIR	(70)	192	94	3311607
29	16.4	4.4	0.0	chr5	179907885	179907952	(1630307)	+	(CGGAG)n	Simple_repeat	1	71	(0)	3311776
1658	16.0	3.3	1.4	chr5	180603918	180604027	(934232)	+	AluJb	SINE/Alu	196	305	(7)	3312971
577	30.7	11.5	2.8	chr5	180604215	180604673	(933586)	+	L2	LINE/L2	2471	2974	(445)	3312973
6845	10.0	0.8	1.1	chr5	180766843	180767782	(770477)	C	L1MA2	LINE/L1	(0)	6304	5361	3313211
539	21.7	4.4	7.7	chr5	181163260	181163494	(374765)	+	L1M5	LINE/L1	5321	5547	(897)	3313755
648	0.0	0.0	0.0	chr5	181188854	181188925	(349334)	C	tRNA-Pro-CCA	tRNA	(3)	72	1	3313825
1979	10.3	0.0	3.0	chr5	181244494	181244793	(293466)	+	AluSx1	SINE/Alu	3	293	(19)	3313918
387	16.2	2.9	0.0	chr5	181473430	181473497	(64762)	+	MLT2B3	LTR/ERVL	3	72	(482)	3314297
359	19.1	2.9	0.0	chr5	181473523	181473590	(64669)	+	MLT2B3	LTR/ERVL	3	72	(482)	3314297
354	19.1	2.9	0.0	chr5	181473616	181473683	(64576)	+	MLT2B3	LTR/ERVL	3	72	(482)	3314297
322	20.6	2.9	0.0	chr5	181473709	181473776	(64483)	+	MLT2B3	LTR/ERVL	3	72	(482)	3314297
297	21.2	2.9	0.1	chr6	440277	440975	(170365004)	+	(CATCC)n	Simple_repeat	1	719	(0)	3314816
266	34.1	2.4	0.8	chr6	441110	441233	(170364746)	+	MLT1I	LTR/ERVL-MaLR	59	184	(227)	3314817
2953	16.9	3.1	2.6	chr6	667364	667860	(170138119)	+	MLT2B3	LTR/ERVL	16	507	(47)	3315077
62	1.7	0.0	0.0	chr6	667861	667920	(170138059)	+	(CCAT)n	Simple_repeat	1	60	(0)	3315078
2953	16.9	3.1	2.6	chr6	667921	667958	(170138021)	+	MLT2B3	LTR/ERVL	508	553	(1)	3315077
1154	19.8	10.6	0.0	chr6	667961	668238	(170137741)	C	L1MCa	LINE/L1	(4916)	1592	1282	3315076
1256	19.2	14.2	2.4	chr6	719306	719646	(170086333)	+	MLT1B	LTR/ERVL-MaLR	3	390	(0)	3315139
274	21.7	1.4	0.0	chr6	1190912	1190980	(169614999)	+	MIR3	SINE/MIR	118	187	(21)	3315759
454	29.0	10.2	6.9	chr6	3251707	3251895	(167554084)	C	MIR3	SINE/MIR	(11)	197	2	3318645
664	23.2	4.2	6.2	chr6	4880981	4881338	(165924641)	C	L1ME2z	LINE/L1	(3826)	2493	2140	3321169
2596	4.0	0.3	0.3	chr6	5892092	5892413	(164913566)	C	L1PA2	LINE/L1	(5707)	448	127	3322710
201	24.6	12.3	7.3	chr6	5892791	5892913	(164913066)	C	L2a	LINE/L2	(9)	3366	3237	3322704
1788	15.9	5.3	0.0	chr6	6200285	6200567	(164605412)	+	AluJb	SINE/Alu	1	299	(13)	3323107
232	27.1	0.0	1.7	chr6	6998093	6998152	(163807827)	C	MIR	SINE/MIR	(122)	140	82	3324362
12	3.9	11.1	0.0	chr6	6998257	6998283	(163807696)	+	(TGGAG)n	Simple_repeat	1	30	(0)	3324363
480	12.9	1.4	0.0	chr6	7949305	7949374	(162856605)	+	THE1B	LTR/ERVL-MaLR	294	364	(0)	3325930
3016	0.7	0.0	0.0	chr6	10070573	10070872	(160735107)	+	AluYa5	SINE/Alu	1	300	(11)	3328903
207	30.1	16.5	3.3	chr6	11139207	11139416	(159666563)	C	L2	LINE/L2	(2129)	1290	1048	3330788
196	35.5	10.2	3.1	chr6	11254917	11255143	(159550836)	C	L2c	LINE/L2	(5)	3382	3138	3330953
13	13.7	0.0	0.0	chr6	11255298	11255322	(159550657)	+	(ATTC)n	Simple_repeat	1	25	(0)	3330954
2215	12.7	0.0	0.0	chr6	12025758	12026057	(158779922)	+	AluSq2	SINE/Alu	1	300	(13)	3332094
628	26.5	9.5	0.0	chr6	12103251	12103431	(158702548)	C	MIRb	SINE/MIR	(35)	233	34	3332196
566	28.5	6.2	1.0	chr6	13488014	13488242	(157317737)	C	MIRb	SINE/MIR	(0)	262	14	3334350
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
1626	20.6	8.4	3.5	chr6	14015057	14015428	(156790551)	C	MSTD	LTR/ERVL-MaLR	(0)	396	5	3335304
251	24.0	1.3	2.6	chr6	15382556	15382632	(155423347)	C	MIR3	SINE/MIR	(7)	201	126	3337875
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
15	5.6	0.0	0.0	chr6	15663182	15663200	(155142779)	+	(T)n	Simple_repeat	1	19	(0)	3338220
298	27.0	4.8	1.0	chr6	15663328	15663428	(155142551)	+	MIRc	SINE/MIR	53	157	(111)	3338221
255	30.7	0.0	1.3	chr6	16333919	16333994	(154471985)	+	L3	LINE/CR1	3008	3082	(1017)	3339358
921	33.6	11.0	2.3	chr6	16334052	16334457	(154471522)	+	L3	LINE/CR1	3087	3536	(563)	3339358
935	31.8	5.2	2.6	chr6	16434938	16435586	(154370393)	C	L2a	LINE/L2	(711)	2708	2042	3339520
598	25.0	12.4	3.3	chr6	16435737	16435889	(154370090)	+	MIRb	SINE/MIR	24	192	(76)	3339521
1536	24.0	11.3	1.7	chr6	16771491	16772314	(154033665)	+	L2a	LINE/L2	2508	3426	(0)	3340028
227	23.9	1.5	1.5	chr6	17033451	17033518	(153772461)	+	UCON92	Unknown	61	128	(4)	3340444
1294	4.2	5.6	0.0	chr6	17327164	17327331	(153478648)	C	LTR21C	LTR/ERVL	(246)	265	88	3340930
987	19.9	17.2	7.4	chr6	17327332	17327379	(153478600)	C	LTR21B	LTR/ERV1	(0)	97	1	3340929
30	18.7	4.9	1.2	chr6	17327479	17327560	(153478419)	+	(TTGGA)n	Simple_repeat	1	86	(0)	3340931
2267	12.6	0.3	0.0	chr6	17327578	17327886	(153478093)	+	AluSz6	SINE/Alu	1	310	(2)	3340932
223	27.7	4.4	0.0	chr6	18596795	18596859	(152209120)	+	L3	LINE/CR1	4031	4098	(1)	3343332
38896	7.3	0.8	0.1	chr6	19401579	19406518	(151399461)	C	HERVL-int	LTR/ERVL	(682)	4972	1	3344382
306	29.1	13.4	0.0	chr6	19459754	19459901	(151346078)	C	MIR3	SINE/MIR	(24)	184	14	3344460
554	31.7	3.0	3.4	chr6	19459901	19460135	(151345844)	C	MIRb	SINE/MIR	(0)	268	35	3344461
13	0.0	0.0	0.0	chr6	19460231	19460247	(151345732)	+	(AAC)n	Simple_repeat	1	17	(0)	3344462
332	34.8	1.8	4.1	chr6	19460301	19460471	(151345508)	+	MIRc	SINE/MIR	57	223	(45)	3344463
13	13.8	2.9	2.9	chr6	19460476	19460509	(151345470)	+	(ATAATT)n	Simple_repeat	1	35	(0)	3344464
23264	10.2	2.5	0.8	chr6	20592767	20597105	(150208874)	C	L1PA7	LINE/L1	(2093)	4368	1	3346337
426	25.4	17.8	12.7	chr6	24284630	24285178	(146520801)	+	L2a	LINE/L2	2820	3424	(2)	3351644
305	34.3	4.0	5.3	chr6	24285325	24285549	(146520430)	+	L2c	LINE/L2	3117	3338	(49)	3351646
371	30.0	5.8	3.0	chr6	25470937	25471070	(145334909)	+	L2b	LINE/L2	3238	3375	(0)	3353680
661	24.9	15.6	2.2	chr6	25471480	25471701	(145334278)	+	MIR	SINE/MIR	6	262	(0)	3353682
318	38.1	7.5	5.5	chr6	25720282	25720624	(145085355)	C	L2c	LINE/L2	(105)	3270	2919	3354012
315	28.8	0.0	0.9	chr6	25720776	25720880	(145085099)	+	L1ME4c	LINE/L1	382	485	(345)	3354013
1844	15.2	2.6	2.2	chr6	25958727	25959180	(144846799)	+	MER61D	LTR/ERV1	1	490	(11)	3354382
526	17.1	21.5	1.6	chr6	25959186	25959378	(144846601)	+	LTR29	LTR/ERV1	372	595	(0)	3354381
2219	9.0	0.0	0.0	chr6	26053651	26053940	(144752039)	+	AluSx1	SINE/Alu	10	299	(13)	3354558
1521	11.7	8.2	9.3	chr6	26053941	26054077	(144751902)	C	Tigger7	DNA/TcMar-Tigger	(209)	2282	2137	3354557
663	30.5	12.0	0.5	chr6	26173337	26173691	(144632288)	C	L1M5	LINE/L1	(1863)	4283	3891	3354764
651	0.0	0.0	0.0	chr6	26313124	26313195	(144492784)	C	tRNA-Met-i	tRNA	(3)	72	1	3354999
511	4.0	0.0	17.8	chr6	26577104	26577193	(144228786)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	3355507
243	24.6	5.4	12.2	chr6	26594653	26594791	(144211188)	C	L1ME3	LINE/L1	(25)	6137	6009	3355541
514	2.7	0.0	18.0	chr6	26594874	26594962	(144211017)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3355542
16844	7.6	1.6	1.3	chr6	27183989	27186157	(143619822)	+	HERVIP10B3-int	LTR/ERV1	5429	7603	(0)	3356434
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
2289	8.1	1.9	1.0	chr6	27214173	27214481	(143591498)	C	AluSz	SINE/Alu	(0)	312	1	3356489
1149	12.3	0.0	0.0	chr6	27229803	27229957	(143576022)	C	AluSz6	SINE/Alu	(22)	290	136	3356538
2198	7.9	0.0	0.0	chr6	27229960	27230251	(143575728)	C	AluSq2	SINE/Alu	(0)	313	18	3356539
21	18.4	0.0	2.0	chr6	27251567	27251617	(143554362)	+	G-rich	Low_complexity	1	51	(0)	3356580
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
362	20.0	10.1	4.6	chr6	27298547	27298677	(143507302)	+	L1MC5a	LINE/L1	2595	2733	(44)	3356673
2695	15.7	5.9	10.1	chr6	27313089	27313957	(143492022)	+	L1MC2	LINE/L1	5163	5984	(360)	3356699
2181	11.0	0.0	0.7	chr6	27334586	27334877	(143471102)	+	AluSx	SINE/Alu	1	290	(22)	3356731
634	5.3	0.0	0.0	chr6	27334987	27335062	(143470917)	C	tRNA-Lys-AAA	tRNA	(0)	76	1	3356732
571	8.3	0.0	0.0	chr6	27576068	27576139	(143229840)	+	tRNA-Lys-AAA	tRNA	2	73	(3)	3357148
441	15.1	0.0	1.4	chr6	27618356	27618429	(143187550)	+	tRNA-Thr-ACA	tRNA	1	73	(3)	3357231
17969	6.6	1.5	1.9	chr6	27634032	27636313	(143169666)	C	HERVL-int	LTR/ERVL	(3382)	2272	1	3357263
671	0.0	0.0	0.0	chr6	28543115	28543186	(142262793)	C	tRNA-Arg-CGA	tRNA	(4)	72	1	3358801
187	30.7	7.3	8.2	chr6	28589183	28589292	(142216687)	C	L3b	LINE/CR1	(531)	4701	4593	3358868
666	0.0	0.0	0.0	chr6	28589379	28589450	(142216529)	+	tRNA-Gln-CAA	tRNA	1	72	(3)	3358869
27	13.0	0.0	0.0	chr6	28589832	28589873	(142216106)	+	(T)n	Simple_repeat	1	42	(0)	3358870
2565	4.6	0.0	0.7	chr6	28641078	28641380	(142164599)	C	AluY	SINE/Alu	(7)	304	4	3358954
1317	17.8	16.3	3.3	chr6	28641381	28641681	(142164298)	C	MSTA	LTR/ERVL-MaLR	(68)	360	2	3358953
656	24.5	13.2	2.7	chr6	28945426	28945647	(141860332)	+	LTR50	LTR/ERVL	10	258	(537)	3359517
402	18.5	3.6	1.2	chr6	28945780	28945861	(141860118)	+	LTR50	LTR/ERVL	572	655	(140)	3359517
2211	7.7	2.1	0.3	chr6	28950429	28950713	(141855266)	C	AluSc	SINE/Alu	(16)	293	4	3359525
656	1.4	0.0	0.0	chr6	28951029	28951101	(141854878)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359526
5773	22.1	1.8	3.5	chr6	29021315	29021933	(141784046)	C	L1M1	LINE/L1	(4832)	2733	2105	3359643
811	13.2	2.4	0.0	chr6	29021934	29022054	(141783925)	C	MSTA	LTR/ERVL-MaLR	(0)	428	305	3359646
4456	10.2	7.4	0.8	chr6	30322509	30322788	(140483191)	C	LTR8	LTR/ERV1	(0)	691	391	3361428
1916	9.7	0.4	6.2	chr6	30322789	30323078	(140482901)	+	AluSq2	SINE/Alu	35	307	(6)	3361429
19	14.4	0.0	0.0	chr6	30571118	30571148	(140234831)	+	(A)n	Simple_repeat	1	31	(0)	3361824
17	22.9	5.9	0.0	chr6	30908441	30908491	(139897488)	+	GA-rich	Low_complexity	1	54	(0)	3362483
36490	6.8	0.9	0.4	chr6	30966374	30967510	(139838469)	+	HERVL-int	LTR/ERVL	879	2028	(3626)	3362571
1163	22.4	10.1	0.9	chr6	31058256	31058580	(139747399)	+	Charlie13b	DNA/hAT-Charlie	155	512	(0)	3362717
1617	15.4	5.7	5.7	chr6	31130700	31130847	(139675132)	C	AluJo	SINE/Alu	(177)	135	1	3362879
697	19.4	0.7	0.2	chr6	31130857	31130885	(139675094)	C	FLAM_C	SINE/Alu	(6)	314	101	3362881
317	36.2	5.0	1.9	chr6	31130886	31131040	(139674939)	+	SVA_A	Retroposon/SVA	88	247	(1140)	3362882
697	19.4	0.7	0.2	chr6	31131041	31131051	(139674928)	C	FLAM_C	SINE/Alu	(6)	100	2	3362881
2336	9.7	0.7	1.6	chr6	31131312	31131622	(139674357)	+	AluSq2	SINE/Alu	1	308	(5)	3362883
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
752	18.9	0.8	0.8	chr6	31791230	31791350	(139014629)	+	AluJb	SINE/Alu	1	122	(190)	3363897
26	0.0	0.0	3.3	chr6	31791351	31791380	(139014599)	+	(AAATT)n	Simple_repeat	1	30	(0)	3363898
19	8.9	3.5	8.5	chr6	31902313	31902418	(138903561)	+	(CGCCCG)n	Simple_repeat	1	100	(0)	3364127
15	13.7	0.0	0.0	chr6	32972077	32972100	(137833879)	+	(CG)n	Simple_repeat	1	24	(0)	3365688
25	20.6	0.0	3.1	chr6	33200310	33200374	(137605605)	+	(CCG)n	Simple_repeat	1	65	(0)	3365969
23	25.1	0.0	0.0	chr6	34132556	34132614	(136673365)	+	(TCTG)n	Simple_repeat	1	59	(0)	3367692
336	29.8	15.1	2.1	chr6	34484813	34485093	(136320886)	C	L2a	LINE/L2	(161)	3265	2942	3368513
325	12.3	0.0	5.0	chr6	34485226	34485285	(136320694)	C	HY4	scRNA	(0)	93	37	3368514
614	28.4	25.2	1.3	chr6	34485286	34486114	(136319865)	C	L2a	LINE/L2	(611)	2808	1715	3368513
1860	13.6	5.1	0.4	chr6	34672110	34672388	(136133591)	C	AluSz	SINE/Alu	(19)	293	1	3368874
814	13.8	1.6	0.0	chr6	34672434	34672556	(136133423)	+	AluJo	SINE/Alu	1	125	(187)	3368875
440	27.5	2.0	2.0	chr6	35260653	35260804	(135545175)	+	MIR3	SINE/MIR	57	208	(0)	3369994
659	21.3	12.3	0.0	chr6	35471142	35471291	(135334688)	C	AluSp	SINE/Alu	(16)	297	127	3370448
346	24.5	5.1	9.5	chr6	36441359	36441540	(134364439)	+	MLT1J1	LTR/ERVL-MaLR	19	192	(219)	3372525
46	2.3	0.0	0.0	chr6	36680308	36680351	(134125628)	+	(GT)n	Simple_repeat	1	44	(0)	3373075
376	27.1	6.3	3.6	chr6	37022823	37022960	(133783019)	C	MIR	SINE/MIR	(33)	229	88	3373747
483	24.9	1.1	11.3	chr6	37242881	37243075	(133562904)	C	MLT1L	LTR/ERVL-MaLR	(305)	305	131	3374328
411	30.6	10.5	3.5	chr6	37243222	37243424	(133562555)	+	MLT1J	LTR/ERVL-MaLR	32	250	(262)	3374329
2795	16.5	8.4	8.4	chr6	37574638	37575026	(133230953)	C	L1MB7	LINE/L1	(294)	5890	5464	3374921
541	31.6	6.4	1.7	chr6	37575032	37575269	(133230710)	C	LTR78	LTR/ERV1	(1052)	252	3	3374924
17	21.1	0.0	7.8	chr6	37697623	37697686	(133108293)	+	(CGC)n	Simple_repeat	1	64	(0)	3375149
16	21.4	1.9	3.7	chr6	37697791	37697843	(133108136)	+	G-rich	Low_complexity	1	54	(0)	3375150
18	15.0	0.0	7.7	chr6	37697920	37697971	(133108008)	+	(CTC)n	Simple_repeat	1	52	(0)	3375151
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
652	28.7	10.2	1.7	chr6	37877784	37878070	(132927909)	C	L2	LINE/L2	(458)	2961	2648	3375551
10256	16.4	5.9	1.4	chr6	37997981	38000000	(132805979)	+	L1MC3	LINE/L1	5658	7773	(12)	3375755
16	12.4	6.9	7.8	chr6	39792379	39792450	(131013529)	+	(AGCGCG)n	Simple_repeat	1	77	(0)	3378541
405	28.9	3.9	7.0	chr6	41368819	41369004	(129436975)	+	MIRb	SINE/MIR	63	242	(26)	3381017
22	27.9	3.1	2.0	chr6	41488815	41488912	(129317067)	+	GA-rich	Low_complexity	1	101	(0)	3381255
32	23.3	0.0	0.0	chr6	41744029	41744104	(129061875)	+	(GAATG)n	Simple_repeat	1	76	(0)	3381730
2460	6.9	0.0	0.0	chr6	42881184	42881486	(127924493)	+	AluY	SINE/Alu	1	303	(8)	3384268
653	20.3	1.3	11.1	chr6	42881487	42881560	(127924419)	C	MER2B	DNA/TcMar-Tigger	(92)	244	181	3384267
1712	12.1	2.6	10.0	chr6	42881566	42881759	(127924220)	C	AluSz6	SINE/Alu	(6)	306	135	3384269
2136	11.6	0.0	1.0	chr6	42881760	42882060	(127923919)	C	AluSz	SINE/Alu	(14)	298	1	3384270
12	20.2	2.9	0.0	chr6	43456003	43456036	(127349943)	+	(CTC)n	Simple_repeat	1	35	(0)	3385386
13	16.3	2.8	2.7	chr6	43456099	43456134	(127349845)	+	(CCACC)n	Simple_repeat	1	37	(0)	3385387
186	30.5	0.0	1.7	chr6	43742403	43742462	(127063517)	C	L2b	LINE/L2	(0)	3375	3317	3385939
22	14.9	0.0	0.0	chr6	43769692	43769738	(127036241)	+	(GT)n	Simple_repeat	1	47	(0)	3385987
1249	16.6	4.2	1.1	chr6	44332425	44332699	(126473280)	C	L1MB3	LINE/L1	(40)	6143	5853	3386985
27679	2.0	0.1	0.0	chr6	45062448	45068476	(125737503)	+	L1PA2	LINE/L1	124	6155	(0)	3388113
465	34.6	6.8	2.8	chr6	45652968	45653291	(125152688)	+	L2	LINE/L2	2738	3075	(344)	3388946
970	20.1	3.6	3.0	chr6	45653330	45653574	(125152405)	C	L2a	LINE/L2	(208)	3218	2957	3388947
16	9.7	0.0	0.0	chr6	48826817	48826838	(121979141)	+	(T)n	Simple_repeat	1	22	(0)	3393625
474	23.5	25.8	0.5	chr6	51966682	51966878	(118839101)	C	L2a	LINE/L2	(9)	3417	3154	3397783
51	0.0	0.0	0.0	chr6	51966886	51966931	(118839048)	+	(GATTG)n	Simple_repeat	1	46	(0)	3397784
607	16.7	14.8	0.0	chr6	51967220	51967351	(118838628)	+	MER58A	DNA/hAT-Charlie	68	222	(2)	3397785
285	24.5	15.0	0.0	chr6	52577609	52577710	(118228269)	C	L2a	LINE/L2	(14)	3412	3293	3398746
58	28.9	2.2	0.0	chr6	52587120	52587303	(118218676)	+	(TGGA)n	Simple_repeat	1	188	(0)	3398770
706	27.2	7.9	2.3	chr6	53754411	53754493	(117051486)	+	LTR16D2	LTR/ERVL	8	97	(475)	3400687
32	9.1	0.0	0.0	chr6	53754494	53754541	(117051438)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3400688
706	27.4	12.5	2.1	chr6	53754542	53754926	(117051053)	+	LTR16D2	LTR/ERVL	98	522	(50)	3400687
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
20	25.2	0.0	7.6	chr6	53795054	53795075	(117010904)	+	(GCG)n	Simple_repeat	53	103	(0)	3400740
12	5.5	0.0	0.0	chr6	53795238	53795256	(117010723)	+	(GGC)n	Simple_repeat	1	19	(0)	3400742
1130	9.5	7.6	0.0	chr6	57961606	57961763	(112844216)	C	AluSx1	SINE/Alu	(14)	298	128	3406375
347	34.0	14.2	4.3	chr6	63694936	63695331	(107110648)	C	L2a	LINE/L2	(50)	3376	2935	3410998
335	32.8	3.2	3.2	chr6	63695352	63695537	(107110442)	C	L3	LINE/CR1	(2142)	1957	1772	3410999
796	29.3	19.8	1.0	chr6	63695530	63696012	(107109967)	C	L2a	LINE/L2	(502)	2917	2322	3410998
1225	27.9	4.6	1.8	chr6	64396339	64396895	(106409084)	C	L1ME3A	LINE/L1	(866)	5280	4675	3411842
304	27.1	6.1	8.3	chr6	64396921	64397089	(106408890)	C	L1M5	LINE/L1	(1292)	4854	4690	3411844
12	4.3	8.3	0.0	chr6	71420624	71420647	(99385332)	+	(AGG)n	Simple_repeat	1	26	(0)	3420543
415	10.8	2.6	1.3	chr6	73550596	73550670	(97255309)	+	L1MD3	LINE/L1	7904	7979	(16)	3423732
2032	13.8	0.3	0.7	chr6	73550941	73551238	(97254741)	+	AluSx1	SINE/Alu	1	297	(15)	3423733
36	5.3	0.0	0.0	chr6	73580860	73580899	(97225080)	+	(GT)n	Simple_repeat	1	40	(0)	3423810
36	0.0	0.0	0.0	chr6	73653499	73653531	(97152448)	+	(CCCCCG)n	Simple_repeat	1	33	(0)	3423987
221	39.0	2.4	0.8	chr6	73749853	73749976	(97056003)	C	L2	LINE/L2	(568)	2851	2726	3424175
26	20.2	0.0	0.0	chr6	75284721	75284777	(95521202)	+	(CGCCGC)n	Simple_repeat	1	57	(0)	3425987
22	21.5	3.2	1.5	chr6	75284852	75284927	(95521052)	+	GA-rich	Low_complexity	1	77	(0)	3425988
3091	16.7	1.8	0.9	chr6	75562653	75563191	(95242788)	+	L1PA15-16	LINE/L1	1	544	(6309)	3426403
8469	12.2	2.7	2.1	chr6	75563174	75563329	(95242650)	+	L1PA15-16	LINE/L1	1458	1611	(5242)	3426403
38	0.0	0.0	0.0	chr6	75563330	75563362	(95242617)	+	(TG)n	Simple_repeat	1	33	(0)	3426404
8541	25.9	6.3	2.5	chr6	79120195	79121499	(91684480)	+	L1ME1	LINE/L1	2954	4318	(2623)	3430827
2054	12.5	0.3	2.7	chr6	79121500	79121795	(91684184)	+	AluSx	SINE/Alu	1	289	(23)	3430829
17	12.0	2.6	2.6	chr6	82364685	82364722	(88441257)	+	(GCAGGA)n	Simple_repeat	1	39	(0)	3435072
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
1710	12.7	0.7	1.8	chr6	87484042	87484314	(83321665)	C	HERVIP10FH-int	LTR/ERV1	(4832)	270	1	3441621
3145	7.0	1.4	10.3	chr6	87484318	87484871	(83321108)	C	LTR10F	LTR/ERV1	(7)	504	1	3441621
17	19.1	7.2	2.7	chr6	88166294	88166362	(82639617)	+	(TCGCTC)n	Simple_repeat	1	74	(0)	3442790
19	16.7	0.0	2.4	chr6	88166571	88166612	(82639367)	+	(CCT)n	Simple_repeat	1	42	(0)	3442791
488	15.1	2.3	0.0	chr6	88962771	88962856	(81843123)	+	AluJb	SINE/Alu	123	210	(102)	3443855
20	16.6	0.0	0.0	chr6	88963742	88963782	(81842197)	+	(CGCCC)n	Simple_repeat	1	41	(0)	3443858
461	29.2	4.7	2.2	chr6	90187745	90187947	(80618032)	C	MIR	SINE/MIR	(10)	252	50	3446012
12	10.1	9.4	0.0	chr6	90284201	90284232	(80521747)	+	A-rich	Low_complexity	1	35	(0)	3446154
13	13.2	0.0	0.0	chr6	90669554	90669578	(80136401)	+	(GTGG)n	Simple_repeat	1	25	(0)	3446714
44	0.0	0.0	0.0	chr6	93395576	93395613	(77410366)	+	(CA)n	Simple_repeat	1	38	(0)	3450031
12	13.7	6.2	0.0	chr6	93416522	93416553	(77389426)	+	A-rich	Low_complexity	1	34	(0)	3450051
15	17.6	0.0	4.8	chr6	95577454	95577495	(75228484)	+	(GCCCC)n	Simple_repeat	1	42	(0)	3452635
4883	11.7	3.2	3.5	chr6	97978783	97979621	(72826358)	+	LTR1A2	LTR/ERV1	1	837	(0)	3455725
24	20.3	2.0	0.0	chr6	98836468	98836518	(71969461)	+	GA-rich	Low_complexity	1	52	(0)	3456779
12	8.0	7.4	0.0	chr6	98845843	98845869	(71960110)	+	(TCCTT)n	Simple_repeat	1	29	(0)	3456782
15	16.9	0.0	2.9	chr6	100881024	100881058	(69924921)	+	(CCT)n	Simple_repeat	1	35	(0)	3459592
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
359	28.3	10.9	2.7	chr6	103123386	103123570	(67682409)	C	L1MDa	LINE/L1	(6221)	412	211	3462360
43555	7.3	2.2	0.3	chr6	105217494	105222766	(65583213)	C	HERVL-int	LTR/ERVL	(274)	5380	1	3465155
342	34.6	6.4	1.4	chr6	106443355	106443562	(64362417)	C	L4_A_Mam	LINE/RTE-X	(244)	4746	4528	3466937
1934	8.4	0.0	0.0	chr6	106443720	106443994	(64361985)	C	L1MA3	LINE/L1	(0)	6305	6031	3466938
263	27.6	3.6	6.3	chr6	107746029	107746116	(63059863)	C	L2a	LINE/L2	(225)	3201	3112	3469304
647	27.6	2.2	1.3	chr6	107746112	107746335	(63059644)	C	L2a	LINE/L2	(411)	3008	2783	3469304
215	23.3	5.5	1.0	chr6	107746371	107746474	(63059505)	C	L2a	LINE/L2	(748)	2671	2563	3469304
17	0.0	0.0	0.0	chr6	107819667	107819685	(62986294)	+	(A)n	Simple_repeat	1	19	(0)	3469432
507	19.1	0.0	0.0	chr6	107948506	107948594	(62857385)	+	L1M4c	LINE/L1	118	206	(6178)	3469638
1483	11.7	5.5	1.9	chr6	107948592	107948609	(62857370)	+	L1M4c	LINE/L1	1944	1961	(4423)	3469638
1848	14.3	24.8	4.3	chr6	107948610	107949098	(62856881)	+	LTR29	LTR/ERV1	1	622	(0)	3469639
1483	11.7	5.5	1.9	chr6	107949099	107949341	(62856638)	+	L1M4c	LINE/L1	1962	2215	(4169)	3469638
366	31.1	2.9	2.5	chr6	108782904	108783107	(62022872)	+	L1ME5	LINE/L1	5983	6187	(7)	3471143
511	26.1	3.4	21.2	chr6	109480733	109481019	(61324960)	+	MIRb	SINE/MIR	34	267	(1)	3472226
201	38.7	7.2	5.1	chr6	110158782	110158958	(60647021)	+	L2c	LINE/L2	3059	3239	(148)	3473233
3078	19.0	9.4	4.2	chr6	110491486	110492193	(60313786)	C	LTR8B	LTR/ERV1	(72)	748	1	3473730
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
15	27.4	0.0	0.0	chr6	111259600	111259647	(59546332)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	3475317
456	22.7	4.3	2.1	chr6	111259722	111259858	(59546121)	+	MIRc	SINE/MIR	15	156	(74)	3475318
1932	19.6	4.6	4.9	chr6	111274141	111274825	(59531154)	C	L1M2	LINE/L1	(3629)	3930	2840	3475340
1674	17.6	5.3	1.4	chr6	111274907	111275195	(59530784)	C	AluJr	SINE/Alu	(0)	312	12	3475344
451	33.1	5.4	6.7	chr6	111567971	111568401	(59237578)	+	Plat_L3	LINE/CR1	2911	3335	(251)	3475843
68	0.0	0.0	0.0	chr6	111568433	111568490	(59237489)	+	(GT)n	Simple_repeat	1	58	(0)	3475844
488	11.9	1.5	0.0	chr6	111568636	111568702	(59237277)	+	AluSz	SINE/Alu	1	68	(244)	3475845
13	15.7	9.3	0.0	chr6	111568709	111568751	(59237228)	+	(ATCCATG)n	Simple_repeat	1	47	(0)	3475846
828	26.2	15.2	1.4	chr6	111957495	111957839	(58848140)	C	MER20B	DNA/hAT-Charlie	(352)	431	31	3476434
381	25.0	9.8	4.5	chr6	111957857	111958078	(58847901)	C	L2	LINE/L2	(2976)	443	209	3476430
300	27.4	13.3	5.0	chr6	113971785	113972009	(56833970)	C	MIRb	SINE/MIR	(8)	260	5	3479424
504	33.1	9.4	1.7	chr6	114111760	114112103	(56693876)	+	L2b	LINE/L2	858	1230	(2189)	3479658
1577	17.4	13.1	3.6	chr6	114112110	114112557	(56693422)	+	MLT1D	LTR/ERVL-MaLR	8	504	(1)	3479659
1442	16.5	10.4	3.0	chr6	116665261	116665563	(54140416)	+	L1MC	LINE/L1	4938	5276	(870)	3482899
1759	17.2	0.0	5.5	chr6	116665564	116665889	(54140090)	C	AluJb	SINE/Alu	(3)	309	2	3482900
1442	16.5	10.4	3.0	chr6	116665890	116665922	(54140057)	+	L1MC	LINE/L1	5277	5302	(844)	3482899
11	18.8	4.3	4.2	chr6	117482790	117482835	(53323144)	+	(CGGCGG)n	Simple_repeat	1	48	(0)	3483950
23	25.6	3.5	1.1	chr6	117482937	117483021	(53322958)	+	G-rich	Low_complexity	1	88	(0)	3483951
6512	20.0	2.7	4.3	chr6	117829384	117832721	(52973258)	+	L1MA4	LINE/L1	1253	4455	(3107)	3484382
4971	20.1	4.7	0.8	chr6	118576793	118578078	(52227901)	+	HERVIP10B3-int	LTR/ERV1	6265	7601	(2)	3485357
2083	9.8	1.1	0.4	chr6	118751621	118751897	(52054082)	C	AluSq2	SINE/Alu	(33)	280	2	3485631
2144	25.6	5.8	6.2	chr6	118751898	118752445	(52053534)	C	L2a	LINE/L2	(594)	2825	2277	3485627
22098	8.0	1.6	1.2	chr6	118833885	118838156	(51967823)	C	L1PA7	LINE/L1	(8)	6146	1875	3485749
2173	10.3	1.3	1.0	chr6	118838157	118838457	(51967522)	C	AluY	SINE/Alu	(8)	303	2	3485750
23	12.6	0.0	0.0	chr6	118893825	118893864	(51912115)	+	(A)n	Simple_repeat	1	40	(0)	3485823
24	17.9	5.4	2.6	chr6	118893924	118893997	(51911982)	+	(CCG)n	Simple_repeat	1	78	(0)	3485824
21	22.8	1.4	4.1	chr6	118935172	118935243	(51870736)	+	G-rich	Low_complexity	1	73	(0)	3485880
1513	25.6	7.2	1.9	chr6	118935315	118935928	(51870051)	C	L1M4	LINE/L1	(1034)	5112	4464	3485881
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2327	25.6	5.4	4.5	chr6	119866331	119867050	(50938929)	+	L1M4a1	LINE/L1	901	1620	(959)	3487125
2609	5.0	0.3	0.0	chr6	121411677	121411978	(49394001)	+	AluY	SINE/Alu	1	303	(8)	3488950
730	25.7	3.7	5.0	chr6	121411979	121412014	(49393965)	C	MER58A	DNA/hAT-Charlie	(123)	101	60	3488949
46	9.6	0.0	0.0	chr6	121412015	121412083	(49393896)	+	(GAATA)n	Simple_repeat	1	69	(0)	3488951
730	25.7	3.7	5.0	chr6	121412084	121412136	(49393843)	C	MER58A	DNA/hAT-Charlie	(165)	59	7	3488949
385	26.4	6.0	1.0	chr6	121884712	121884850	(48921129)	+	MIRb	SINE/MIR	108	259	(3)	3489723
512	35.6	10.8	3.8	chr6	122395307	122395891	(48410088)	C	L2c	LINE/L2	(0)	3387	2758	3490354
473	24.3	2.6	1.8	chr6	122395891	122396003	(48409976)	C	MIRc	SINE/MIR	(64)	204	91	3490355
805	18.5	1.4	12.2	chr6	122726724	122726969	(48079010)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3490773
1009	28.0	0.8	0.4	chr6	122726985	122727228	(48078751)	+	MIR	SINE/MIR	17	261	(1)	3490774
14	18.5	0.0	0.0	chr6	122996244	122996274	(47809705)	+	(CAG)n	Simple_repeat	1	31	(0)	3491135
12	11.5	3.3	3.2	chr6	123522292	123522321	(47283658)	+	(GTTCT)n	Simple_repeat	1	31	(0)	3491795
20	0.0	0.0	0.0	chr6	123522518	123522539	(47283440)	+	(T)n	Simple_repeat	1	22	(0)	3491796
4966	7.2	0.3	0.0	chr6	123794052	123794680	(47011299)	+	HERVL-int	LTR/ERVL	1	631	(5023)	3492182
34471	7.8	1.5	0.1	chr6	123794687	123798699	(47007280)	+	HERVL-int	LTR/ERVL	1154	5230	(424)	3492182
371	32.0	7.4	6.2	chr6	124470012	124470460	(46335519)	C	L2b	LINE/L2	(213)	3162	2695	3493033
17	12.0	0.0	3.3	chr6	124470547	124470576	(46335403)	+	(AC)n	Simple_repeat	1	30	(0)	3493034
1513	13.8	8.4	13.6	chr6	125511282	125511685	(45294294)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3494435
1374	34.4	7.8	4.0	chr6	125511686	125511862	(45294117)	+	ERV3-16A3_I-int	LTR/ERVL	2047	2395	(3259)	3494434
1668	23.2	8.1	3.3	chr6	125512003	125512425	(45293554)	+	LTR16A1	LTR/ERVL	12	456	(0)	3494436
16	0.0	0.0	0.0	chr6	125679476	125679492	(45126487)	+	(T)n	Simple_repeat	1	17	(0)	3494680
267	31.8	1.1	0.0	chr6	125986855	125986942	(44819037)	C	L2c	LINE/L2	(38)	3349	3261	3495121
16	11.3	4.8	4.5	chr6	128883311	128883352	(41922627)	+	(GCA)n	Simple_repeat	1	44	(0)	3498755
25	0.0	0.0	0.0	chr6	128883787	128883801	(41922178)	+	(TA)n	Simple_repeat	1	15	(0)	3498756
41	0.0	0.0	0.0	chr6	128883802	128883836	(41922143)	+	(AC)n	Simple_repeat	1	35	(0)	3498757
15	21.9	0.0	5.7	chr6	128917049	128917101	(41888878)	+	(TTCT)n	Simple_repeat	1	53	(0)	3498788
584	25.8	0.8	13.2	chr6	129710856	129711127	(41094852)	C	MIRb	SINE/MIR	(10)	258	8	3499825
10016	16.6	4.4	2.5	chr6	132179549	132181191	(38624788)	+	L1PB1	LINE/L1	258	1926	(4937)	3503514
2121	13.4	18.9	6.0	chr6	132793443	132793893	(38012086)	+	LTR64	LTR/ERV1	2	524	(4)	3504333
2494	8.1	0.0	0.7	chr6	132794096	132794402	(38011577)	C	AluSx	SINE/Alu	(6)	306	2	3504334
7573	10.5	1.3	0.0	chr6	132904460	132905575	(37900404)	C	HSMAR1	DNA/TcMar-Mariner	(13)	1274	144	3504521
29689	7.2	0.8	0.3	chr6	133558921	133561510	(37244469)	C	HERVL-int	LTR/ERVL	(3040)	2614	2	3505383
12720	7.2	0.7	0.3	chr6	133654072	133655802	(37150177)	+	HERVL-int	LTR/ERVL	25	1762	(3892)	3505520
1289	7.1	0.6	0.0	chr6	133655800	133655969	(37150010)	+	HERVL-int	LTR/ERVL	3544	3714	(1940)	3505520
23	22.6	6.2	2.0	chr6	135851783	135851824	(34954155)	+	(TCTT)n	Simple_repeat	1	98	(0)	3509029
517	19.8	20.1	1.8	chr6	136184400	136184569	(34621410)	C	MER3	DNA/hAT-Charlie	(0)	209	1	3509471
1761	17.2	5.5	0.0	chr6	136230092	136230381	(34575598)	+	AluJr	SINE/Alu	4	310	(2)	3509548
239	20.7	20.4	7.6	chr6	136230400	136230530	(34575449)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	459	3509549
605	32.3	7.8	1.9	chr6	136403294	136403510	(34402469)	C	MIR	SINE/MIR	(23)	245	7	3509828
1103	31.8	8.5	3.9	chr6	136403523	136404316	(34401663)	+	L4_C_Mam	LINE/RTE-X	1612	2445	(2693)	3509829
852	23.6	3.1	1.4	chr6	137314061	137314283	(33491696)	+	MIR	SINE/MIR	33	259	(3)	3511309
498	32.6	16.7	2.5	chr6	137843337	137843943	(32962036)	C	L2c	LINE/L2	(798)	2621	1911	3512065
334	31.4	13.9	3.3	chr6	137844000	137844243	(32961736)	C	L2a	LINE/L2	(0)	3426	3153	3512069
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
11	18.6	0.0	7.1	chr6	138161813	138161854	(32644125)	+	(GCCCCA)n	Simple_repeat	1	42	(0)	3512560
16	3.5	3.0	5.9	chr6	138161876	138161908	(32644071)	+	(GGCGG)n	Simple_repeat	1	34	(0)	3512561
322	30.3	7.1	11.9	chr6	139027596	139028041	(31777938)	C	MLT1M	LTR/ERVL-MaLR	(129)	543	121	3513980
334	33.0	26.7	2.3	chr6	139569401	139569614	(31236365)	+	L3	LINE/CR1	2985	3250	(849)	3514904
344	31.7	7.3	8.9	chr6	139569632	139569811	(31236168)	C	MIRc	SINE/MIR	(14)	254	78	3514907
2761	1.3	0.0	0.7	chr6	139662406	139662703	(31143276)	+	AluYa5	SINE/Alu	12	307	(4)	3515035
2854	12.8	0.2	0.5	chr6	139662957	139663403	(31142576)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2273	3515036
28330	9.4	3.2	1.9	chr6	140331735	140335940	(30470039)	C	HERVL-int	LTR/ERVL	(0)	4311	1	3515930
207	32.4	14.3	1.0	chr6	142349025	142349127	(28456852)	C	MIRc	SINE/MIR	(140)	128	10	3518390
866	31.4	6.9	11.0	chr6	143834654	143835407	(26970572)	C	L2	LINE/L2	(447)	2972	2252	3520490
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
15	21.8	2.9	0.0	chr6	144216902	144216935	(26589044)	+	(TC)n	Simple_repeat	1	35	(0)	3521046
18	18.9	4.2	0.0	chr6	145814784	145814831	(24991148)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3523214
1493	17.6	4.6	3.8	chr6	146542640	146543178	(24262801)	+	L1MA9	LINE/L1	5064	5616	(696)	3524165
12	21.6	0.0	0.0	chr6	146543341	146543372	(24262607)	+	(GGCCCC)n	Simple_repeat	1	32	(0)	3524168
1188	19.4	6.5	2.8	chr6	147118281	147118785	(23687194)	+	L1MB3	LINE/L1	5109	5651	(523)	3524963
1328	24.0	2.6	8.2	chr6	147118786	147119198	(23686781)	+	MSTD	LTR/ERVL-MaLR	1	389	(7)	3524964
12	21.4	4.3	2.1	chr6	147172802	147172847	(23633132)	+	(GTCTTAT)n	Simple_repeat	1	48	(0)	3525043
33	0.0	0.0	0.0	chr6	147515177	147515207	(23290772)	+	(T)n	Simple_repeat	1	31	(0)	3525507
144	19.0	0.4	0.0	chr6	147515360	147515634	(23290345)	+	(TCCA)n	Simple_repeat	1	276	(0)	3525508
318	17.8	0.0	8.8	chr6	147674608	147674687	(23131292)	+	LTR33B	LTR/ERVL	428	500	(3)	3525736
26004	6.4	0.6	0.1	chr6	148858498	148864630	(21941349)	C	L1PA5	LINE/L1	(0)	6327	177	3527561
384	9.3	0.0	0.0	chr6	148864634	148864687	(21941292)	C	MLT2A2	LTR/ERVL	(398)	55	2	3527562
1823	15.0	1.6	1.6	chr6	149498538	149498844	(21307135)	+	AluJr	SINE/Alu	1	307	(5)	3528549
2571	18.4	6.2	4.2	chr6	149498845	149499443	(21306536)	+	L1MD1	LINE/L1	5206	5823	(419)	3528546
4908	14.2	3.3	2.4	chr6	149618511	149619331	(21186648)	+	L1MA5	LINE/L1	5044	5881	(810)	3528767
2047	13.2	1.0	0.7	chr6	149619332	149619633	(21186346)	+	AluSx3	SINE/Alu	2	304	(7)	3528789
17	5.0	0.0	0.0	chr6	149983851	149983871	(20822108)	+	(T)n	Simple_repeat	1	21	(0)	3529473
15	5.6	0.0	0.0	chr6	149983976	149983994	(20821985)	+	(T)n	Simple_repeat	1	19	(0)	3529474
18	4.8	0.0	0.0	chr6	149984167	149984188	(20821791)	+	(T)n	Simple_repeat	1	22	(0)	3529475
15	5.6	0.0	0.0	chr6	149984321	149984339	(20821640)	+	(T)n	Simple_repeat	1	19	(0)	3529476
2474	7.3	0.7	0.0	chr6	150827274	150827575	(19978404)	C	AluSp	SINE/Alu	(9)	304	1	3530828
202	22.1	2.5	6.1	chr6	151263879	151263960	(19542019)	+	L2	LINE/L2	2283	2361	(1058)	3531691
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
28	19.6	2.0	6.9	chr6	151391701	151391800	(19414179)	+	(GCC)n	Simple_repeat	1	102	(0)	3531915
622	13.5	2.6	3.5	chr6	151764107	151764221	(19041758)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	3532589
2147	9.1	2.1	1.4	chr6	152973593	152973877	(17832102)	+	AluSc	SINE/Alu	14	300	(9)	3534278
693	14.6	0.0	0.0	chr6	152974125	152974220	(17831759)	+	AluSq2	SINE/Alu	202	297	(16)	3534279
316	33.6	9.0	5.8	chr6	154997015	154997324	(15808655)	+	L2c	LINE/L2	2910	3230	(157)	3537438
552	32.0	6.8	0.0	chr6	154997349	154997526	(15808453)	+	MER91A	DNA/hAT-Tip100	5	195	(1)	3537439
1772	16.5	1.1	0.0	chr6	154997630	154997937	(15808042)	C	AluJb	SINE/Alu	(0)	312	1	3537440
1704	19.5	10.3	2.6	chr6	155782351	155782771	(15023208)	+	MER31B	LTR/ERV1	10	466	(0)	3538563
1435	21.3	4.4	2.1	chr6	156806762	156807092	(13998887)	C	MER58B	DNA/hAT-Charlie	(2)	339	1	3540039
17	8.0	0.0	0.0	chr6	157240914	157240940	(13565039)	+	(GGGA)n	Simple_repeat	1	27	(0)	3540589
28	0.0	0.0	0.0	chr6	157472484	157472510	(13333469)	+	(AGTGG)n	Simple_repeat	1	27	(0)	3540969
393	32.9	9.6	6.3	chr6	157773402	157773991	(13031988)	C	L2	LINE/L2	(449)	2970	2359	3541444
11	20.2	2.9	0.0	chr6	157774111	157774144	(13031835)	+	(AGAGGC)n	Simple_repeat	1	35	(0)	3541445
40	1.8	1.6	6.2	chr6	157774218	157774280	(13031699)	+	(GGAGTGGA)n	Simple_repeat	1	64	(0)	3541446
1279	17.6	4.6	2.3	chr6	157833844	157834146	(12971833)	C	LTR45B	LTR/ERV1	(0)	783	182	3541553
880	18.8	0.7	1.9	chr6	157834151	157834339	(12971640)	C	AluJb	SINE/Alu	(0)	312	131	3541554
1774	16.1	0.4	3.1	chr6	157834347	157834632	(12971347)	C	AluJr	SINE/Alu	(12)	300	23	3541555
295	24.7	2.3	5.6	chr6	157961254	157961343	(12844636)	+	MLT1I	LTR/ERVL-MaLR	322	408	(3)	3541734
2365	25.7	10.3	1.7	chr6	158052786	158053502	(12752477)	C	L1MC4	LINE/L1	(191)	7851	7085	3541873
301	25.5	1.3	0.4	chr6	158053534	158054278	(12751701)	+	(ATCC)n	Simple_repeat	1	755	(0)	3541875
740	21.9	0.0	0.8	chr6	158054279	158054451	(12751528)	C	L1MC4	LINE/L1	(791)	7091	6922	3541873
779	23.6	7.8	9.0	chr6	159974048	159974585	(10831394)	C	L1M5	LINE/L1	(574)	5605	5088	3544924
530	33.2	8.4	6.2	chr6	160944045	160944510	(9861469)	C	L2c	LINE/L2	(0)	3387	2911	3545975
13	0.0	7.7	3.6	chr6	160944676	160944701	(9861278)	+	(GGATT)n	Simple_repeat	1	28	(0)	3545976
420	21.1	5.3	2.5	chr6	161411585	161412905	(9393074)	+	(ACTC)n	Simple_repeat	1	1391	(0)	3546646
624	31.7	12.1	1.9	chr6	163554535	163554955	(7251024)	+	L2	LINE/L2	2378	2847	(572)	3549622
1280	23.6	4.6	3.3	chr6	166584067	166584429	(4221550)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	5	3553415
15	20.1	3.6	3.5	chr6	166999124	166999178	(3806801)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3553893
198	27.6	22.6	2.2	chr6	168732741	168732897	(2073082)	+	MIRb	SINE/MIR	52	243	(19)	3555741
706	17.7	0.7	3.2	chr6	169217950	169219450	(1586529)	+	(ATGG)n	Simple_repeat	1	1512	(0)	3556250
18	21.0	2.4	7.1	chr6	169959441	169959522	(846457)	+	(CCCTC)n	Simple_repeat	1	84	(0)	3557021
10714	21.2	4.5	1.3	chr6	170194878	170199188	(606791)	+	L1MD1	LINE/L1	2089	6633	(0)	3557216
1667	9.8	0.0	1.7	chr6	170199199	170199432	(606547)	+	AluY	SINE/Alu	82	311	(0)	3557218
274	31.4	8.5	2.5	chr7	102496	102616	(159243357)	+	MIR	SINE/MIR	22	150	(112)	3557958
333	27.9	2.8	6.8	chr7	102759	102955	(159243018)	+	L1MB7	LINE/L1	2498	2682	(3464)	3557959
3346	23.6	2.7	2.9	chr7	365872	366774	(158979199)	C	L1MA5	LINE/L1	(21)	6279	5379	3558250
79	7.8	0.9	0.0	chr7	482261	482369	(158863604)	+	(ATGG)n	Simple_repeat	1	110	(0)	3558400
298	26.7	1.6	0.4	chr7	482373	483179	(158862794)	+	(TGGA)n	Simple_repeat	1	820	(0)	3558401
85	0.0	2.2	2.1	chr7	483416	483506	(158862467)	+	(ATGG)n	Simple_repeat	1	93	(0)	3558402
2256	12.4	0.0	1.0	chr7	619839	620152	(158725821)	C	AluJo	SINE/Alu	(0)	312	2	3558600
327	33.6	5.3	7.5	chr7	620153	620441	(158725532)	C	L1M5	LINE/L1	(1491)	4655	4352	3558597
718	28.6	9.5	1.6	chr7	620640	621132	(158724841)	C	L1MD	LINE/L1	(1823)	4323	3788	3558601
28	21.0	0.0	1.6	chr7	1136662	1136723	(158209250)	+	(TA)n	Simple_repeat	1	62	(0)	3559355
603	27.9	22.5	3.9	chr7	1136724	1137242	(158208731)	+	L2a	LINE/L2	2433	3076	(343)	3559350
430	27.5	12.8	3.2	chr7	1137252	1137469	(158208504)	+	L2a	LINE/L2	3185	3426	(0)	3559350
30	3.1	0.0	0.0	chr7	1188649	1188681	(158157292)	+	(CCTAAC)n	Simple_repeat	1	33	(0)	3559459
543	20.4	0.0	0.0	chr7	1188688	1188775	(158157198)	+	AluJo	SINE/Alu	46	133	(179)	3559460
202	17.8	1.6	0.0	chr7	1188776	1189155	(158156818)	+	GA-rich	Low_complexity	1	386	(0)	3559461
1759	19.0	0.3	1.3	chr7	1189303	1189613	(158156360)	+	AluJb	SINE/Alu	2	309	(3)	3559462
1195	13.3	3.3	1.7	chr7	1210150	1210330	(158135643)	+	AluSx1	SINE/Alu	121	304	(8)	3559515
300	25.3	1.2	1.2	chr7	1210472	1210551	(158135422)	+	UCON105	Unknown	188	267	(6)	3559516
194	31.4	3.9	1.6	chr7	1305712	1305837	(158040136)	+	L2	LINE/L2	2087	2215	(1204)	3559657
348	23.9	0.2	1.5	chr7	1305840	1306647	(158039326)	+	(CCAT)n	Simple_repeat	1	810	(0)	3559658
631	18.6	1.2	1.1	chr7	1415156	1416424	(157929549)	+	(TGGA)n	Simple_repeat	1	1284	(0)	3559877
1348	25.4	9.1	2.2	chr7	1520244	1520693	(157825280)	+	MLT2B3	LTR/ERVL	59	554	(0)	3560018
506	32.3	3.4	0.5	chr7	1520722	1520923	(157825050)	C	MLT1G3	LTR/ERVL-MaLR	(387)	208	1	3560021
1624	13.0	0.0	11.1	chr7	1568948	1569111	(157776862)	C	AluJr	SINE/Alu	(181)	131	1	3560093
1438	26.1	3.4	1.2	chr7	1577266	1577673	(157768300)	C	L1ME1	LINE/L1	(262)	5917	5501	3560113
727	18.2	1.4	0.9	chr7	1594005	1595465	(157750508)	+	(TCCA)n	Simple_repeat	1	1481	(0)	3560140
285	33.3	4.1	3.1	chr7	1595505	1595746	(157750227)	C	L2a	LINE/L2	(58)	3368	3070	3560141
360	24.2	2.1	0.8	chr7	1690044	1690959	(157655014)	+	(GATG)n	Simple_repeat	1	935	(0)	3560315
384	34.2	3.3	2.0	chr7	1691058	1691206	(157654767)	C	MIRc	SINE/MIR	(113)	155	5	3560316
648	17.9	5.1	4.7	chr7	2314817	2316847	(157029126)	+	(CACT)n	Simple_repeat	1	2135	(0)	3561121
121	16.2	2.9	0.0	chr7	3297520	3297757	(156048216)	+	GA-rich	Low_complexity	1	245	(0)	3563098
184	36.4	1.7	1.0	chr7	4124803	4125560	(155220413)	+	(TGAA)n	Simple_repeat	1	771	(0)	3564284
28	0.0	0.0	0.0	chr7	5428728	5428754	(153917219)	+	(T)n	Simple_repeat	1	27	(0)	3567006
12	18.4	5.4	0.0	chr7	6348780	6348816	(152997157)	+	(GCCGC)n	Simple_repeat	1	39	(0)	3569143
2409	7.6	0.0	0.3	chr7	6373948	6374249	(152971724)	C	AluSq2	SINE/Alu	(7)	306	6	3569227
17	27.8	2.4	3.5	chr7	6374414	6374496	(152971477)	+	G-rich	Low_complexity	1	85	(0)	3569228
25	27.2	1.9	3.6	chr7	6374618	6374631	(152971342)	+	(GCCCCGC)n	Simple_repeat	1	105	(0)	3569229
21	17.1	5.6	6.4	chr7	6374632	6374720	(152971253)	+	(CGC)n	Simple_repeat	1	94	(0)	3569230
31360	6.5	1.4	0.3	chr7	7722257	7726231	(151619742)	+	HERVL-int	LTR/ERVL	1	4016	(1638)	3571496
2113	13.0	1.9	3.2	chr7	11567111	11567490	(147778483)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3576338
33	0.0	0.0	0.0	chr7	13920442	13920469	(145425504)	+	(GT)n	Simple_repeat	1	28	(0)	3579355
9855	18.0	3.4	2.8	chr7	14794179	14795839	(144550134)	+	ERVL-B4-int	LTR/ERVL	1	1660	(4054)	3580430
613	30.3	10.5	5.2	chr7	20508166	20508589	(138837384)	+	LTR33A	LTR/ERVL	68	516	(4)	3587870
13	16.3	2.8	2.7	chr7	22083380	22083415	(137262558)	+	(CGCCC)n	Simple_repeat	1	37	(0)	3590177
1806	12.7	5.9	4.0	chr7	23532310	23532464	(135813509)	C	AluJb	SINE/Alu	(6)	306	143	3592524
9310	21.3	8.6	2.3	chr7	24616455	24618953	(134727020)	C	L1MA5A	LINE/L1	(3780)	3782	778	3594167
226	26.3	0.0	1.3	chr7	24618951	24619027	(134726946)	C	L1M3	LINE/L1	(2869)	3271	3196	3594169
296	22.9	5.4	3.2	chr7	24619268	24619393	(134726580)	C	HAL1ME	LINE/L1	(1481)	984	856	3594170
2692	5.1	0.0	0.3	chr7	24619436	24619746	(134726227)	+	AluY	SINE/Alu	1	310	(1)	3594171
25	16.3	8.4	2.9	chr7	25259623	25259717	(134086256)	+	GA-rich	Low_complexity	1	103	(0)	3595180
1085	16.4	2.8	0.5	chr7	26091385	26091593	(133254380)	+	L1MB3	LINE/L1	5970	6183	(0)	3596399
1649	21.2	0.8	6.0	chr7	26160428	26160843	(133185130)	C	MLT2C1	LTR/ERVL	(2)	395	2	3596531
385	27.3	3.2	5.1	chr7	26160857	26161014	(133184959)	+	MIRb	SINE/MIR	114	268	(0)	3596532
184	29.7	0.0	0.0	chr7	26161055	26161091	(133184882)	+	L3	LINE/CR1	54	90	(4009)	3596533
277	32.8	0.0	0.8	chr7	26161125	26161241	(133184732)	+	Plat_L3	LINE/CR1	3178	3293	(293)	3596534
340	25.2	4.2	12.2	chr7	26385046	26385226	(132960747)	C	L2c	LINE/L2	(4)	3383	3218	3596963
1259	22.6	12.3	2.2	chr7	26385228	26385635	(132960338)	+	MLT1K	LTR/ERVL-MaLR	1	455	(140)	3596964
1804	13.8	3.8	5.7	chr7	26850298	26850615	(132495358)	+	AluJb	SINE/Alu	1	312	(0)	3597632
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
12	22.7	2.3	2.3	chr7	28686205	28686247	(130659726)	+	(TTTTA)n	Simple_repeat	1	44	(0)	3600425
24	32.4	2.8	0.9	chr7	28686276	28686383	(130659590)	+	(TCC)n	Simple_repeat	1	111	(0)	3600426
17	5.0	0.0	0.0	chr7	28686474	28686523	(130659450)	+	(A)n	Simple_repeat	1	50	(0)	3600427
20	27.1	0.0	0.0	chr7	28854656	28854705	(130491268)	+	(AC)n	Simple_repeat	1	50	(0)	3600671
784	24.3	2.8	1.9	chr7	28854754	28854967	(130491006)	+	MLT2C1	LTR/ERVL	1	216	(181)	3600672
14	23.2	4.7	3.0	chr7	29609652	29609715	(129736258)	+	(CTTTCT)n	Simple_repeat	1	67	(0)	3601850
561	35.3	12.3	3.4	chr7	30278117	30278679	(129067294)	+	L2	LINE/L2	2454	3073	(346)	3602910
4487	9.5	10.3	5.1	chr7	30580502	30581427	(128764546)	C	LTR12	LTR/ERV1	(108)	1146	76	3603342
548	32.2	5.8	10.3	chr7	30823580	30824015	(128521958)	C	L1MEd	LINE/L1	(6171)	932	518	3603718
2524	17.2	3.7	0.0	chr7	30824056	30824467	(128521506)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3603726
216	31.8	9.8	4.3	chr7	31736364	31736478	(127609495)	+	L2b	LINE/L2	3244	3365	(10)	3605122
289	32.4	5.0	2.8	chr7	32818115	32818292	(126527681)	+	L1ME3G	LINE/L1	313	494	(430)	3606829
65	0.0	0.0	0.0	chr7	32818378	32818432	(126527541)	+	(TG)n	Simple_repeat	1	55	(0)	3606830
2252	11.0	0.0	1.3	chr7	32818632	32818941	(126527032)	C	AluSx4	SINE/Alu	(4)	306	1	3606831
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
1411	28.6	7.3	3.1	chr7	32948758	32948881	(126397092)	C	MLT1K	LTR/ERVL-MaLR	(418)	177	55	3607058
25	12.7	0.0	0.0	chr7	32948888	32948930	(126397043)	+	(AGAG)n	Simple_repeat	1	43	(0)	3607060
2431	12.2	2.0	7.4	chr7	32949039	32949158	(126396815)	C	LTR56	LTR/ERV1	(0)	445	335	3607061
1702	17.6	2.1	0.4	chr7	32949159	32949437	(126396536)	C	AluJr4	SINE/Alu	(18)	294	11	3607062
2431	12.2	2.0	7.4	chr7	32949438	32949647	(126396326)	C	LTR56	LTR/ERV1	(111)	334	144	3607061
983	15.8	3.4	0.5	chr7	33041298	33041500	(126304473)	+	L1MB3	LINE/L1	5975	6183	(0)	3607247
25	19.4	0.0	0.0	chr7	33062804	33062856	(126283117)	+	(CCCGC)n	Simple_repeat	1	53	(0)	3607295
629	21.7	10.0	8.5	chr7	38932516	38932762	(120413211)	C	UCON4	Unknown	(43)	260	10	3615838
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
2108	17.6	2.1	0.3	chr7	40717195	40717618	(118628355)	C	MER61C	LTR/ERV1	(0)	428	13	3618877
207	21.0	10.0	3.6	chr7	40987777	40987860	(118358113)	+	L2c	LINE/L2	3278	3367	(20)	3619210
15	21.6	0.0	0.0	chr7	40987943	40987974	(118357999)	+	(TC)n	Simple_repeat	1	32	(0)	3619211
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
508	29.0	5.9	7.2	chr7	42994746	42994763	(116351210)	C	HAL1	LINE/L1	(463)	2044	2030	3621957
1526	11.9	16.7	0.8	chr7	42994764	42995015	(116350958)	C	AluSg	SINE/Alu	(10)	300	1	3621958
1332	13.4	3.7	1.3	chr7	44556133	44556367	(114789606)	C	LTR45B	LTR/ERV1	(62)	427	187	3624407
2140	12.8	0.0	3.1	chr7	44556381	44556701	(114789272)	C	AluSz	SINE/Alu	(1)	311	1	3624408
261	29.8	5.0	1.1	chr7	45112115	45112209	(114233764)	C	Charlie8	DNA/hAT-Charlie	(2303)	125	27	3625496
232	25.0	2.7	0.0	chr7	45112211	45112282	(114233691)	C	HAL1	LINE/L1	(402)	2105	2032	3625497
2079	9.8	3.9	0.7	chr7	45112285	45112580	(114233393)	+	AluSz6	SINE/Alu	7	312	(0)	3625498
1336	16.4	11.4	4.4	chr7	45753875	45754018	(113591955)	C	AluJr4	SINE/Alu	(15)	297	142	3626308
2407	7.9	2.0	0.0	chr7	45754019	45754310	(113591663)	C	AluSq	SINE/Alu	(15)	298	1	3626309
232	18.4	0.0	0.0	chr7	50451006	50451054	(108894919)	+	Charlie16a	DNA/hAT-Charlie	168	216	(126)	3632385
567	25.3	11.3	8.0	chr7	50451248	50451612	(108894361)	C	MLT1L	LTR/ERVL-MaLR	(11)	599	221	3632386
250	31.8	10.1	3.4	chr7	50839204	50839470	(108506503)	+	L3	LINE/CR1	2117	2403	(1696)	3632870
184	27.5	2.8	2.8	chr7	51606761	51606831	(107739142)	C	MIR	SINE/MIR	(115)	147	77	3633883
265	25.2	6.2	16.1	chr7	51606842	51607021	(107738952)	C	MIR	SINE/MIR	(29)	233	73	3633884
607	27.0	5.2	7.4	chr7	52162159	52162725	(107183248)	+	LTR102_Mam	LTR/ERVL	5	657	(194)	3634543
5739	10.9	1.1	1.0	chr7	54933085	54933175	(104412798)	+	L1MA3	LINE/L1	7464	7557	(167)	3637987
12	27.4	1.8	3.5	chr7	54933238	54933293	(104412680)	+	G-rich	Low_complexity	1	57	(0)	3637989
12	12.8	5.6	2.6	chr7	54933402	54933437	(104412536)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	3637990
2654	15.5	1.9	0.5	chr7	55359912	55360333	(103985640)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3638518
444	21.9	2.8	0.9	chr7	55380462	55380567	(103965406)	+	L1MEf	LINE/L1	84	191	(5945)	3638559
2144	11.2	0.3	0.3	chr7	55380866	55381160	(103964813)	C	AluSq	SINE/Alu	(8)	305	11	3638560
360	17.7	3.1	0.0	chr7	57487360	57487421	(101858552)	+	AluYj4	SINE/Alu	226	289	(22)	3642531
351	21.6	1.4	2.7	chr7	57487757	57487830	(101858143)	+	AluJb	SINE/Alu	208	280	(32)	3642532
83	11.1	0.7	0.7	chr7	57488109	57488257	(101857716)	+	(GAATG)n	Simple_repeat	1	150	(0)	3642533
343	14.9	0.0	0.0	chr7	57488568	57488614	(101857359)	+	AluYh9	SINE/Alu	226	272	(39)	3642534
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
317	15.6	0.0	0.0	chr7	57491465	57491509	(101854464)	+	AluYj4	SINE/Alu	226	270	(41)	3642538
231	23.8	0.0	6.0	chr7	57491608	57491674	(101854299)	C	SVA_E	Retroposon/SVA	(978)	404	342	3642539
351	20.0	1.5	0.0	chr7	57491640	57491704	(101854269)	+	AluYj4	SINE/Alu	224	289	(22)	3642540
407	15.6	3.0	0.0	chr7	57493746	57493809	(101852164)	+	AluYj4	SINE/Alu	224	289	(22)	3642542
356	19.7	2.9	0.0	chr7	57493917	57493982	(101851991)	+	AluYj4	SINE/Alu	226	293	(18)	3642543
347	18.2	0.0	0.0	chr7	57495188	57495242	(101850731)	+	AluYj4	SINE/Alu	225	279	(32)	3642545
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
18	20.3	0.0	0.0	chr7	57496789	57496829	(101849144)	+	(GGAAT)n	Simple_repeat	1	41	(0)	3642550
43	7.2	0.0	0.0	chr7	57496838	57496895	(101849078)	+	(TGGAA)n	Simple_repeat	1	58	(0)	3642551
397	16.2	2.9	0.0	chr7	57496896	57496957	(101849016)	+	AluYj4	SINE/Alu	226	289	(22)	3642552
93	15.3	0.0	0.0	chr7	57496958	57497117	(101848856)	+	(GGAAT)n	Simple_repeat	1	160	(0)	3642553
58	9.0	1.0	1.0	chr7	58067671	58067766	(101278207)	+	(CCATT)n	Simple_repeat	1	97	(0)	3643199
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
3608	20.9	3.8	8.4	chr7	64908241	64908457	(94437516)	C	L1PA11	LINE/L1	(0)	6174	5948	3646919
2939	12.0	2.3	3.2	chr7	65374362	65374853	(93971120)	C	MER57E3	LTR/ERV1	(0)	487	1	3647751
194	29.4	15.4	11.4	chr7	65448670	65448880	(93897093)	+	L2a	LINE/L2	3143	3414	(12)	3647851
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
2893	1.9	0.0	0.0	chr7	65490169	65490477	(93855496)	C	AluYa5	SINE/Alu	(2)	309	1	3647906
48	19.0	0.9	2.6	chr7	65490478	65490541	(93855432)	+	(CTCCA)n	Simple_repeat	4	67	(0)	3647907
54	8.2	2.1	2.0	chr7	65490543	65490638	(93855335)	+	(CATTC)n	Simple_repeat	1	98	(0)	3647908
49	9.9	0.0	0.0	chr7	65490711	65490786	(93855187)	+	(ATTCC)n	Simple_repeat	1	76	(0)	3647909
1507	24.9	5.9	2.1	chr7	65490788	65491307	(93854666)	C	L1M4	LINE/L1	(2037)	4109	3569	3647910
1009	23.4	10.0	1.7	chr7	65929830	65930177	(93415796)	C	L1M5	LINE/L1	(1533)	4613	4234	3648813
1836	20.5	2.0	1.2	chr7	65930182	65930635	(93415338)	C	MER89	LTR/ERV1	(0)	559	4	3648814
7932	20.0	4.5	6.9	chr7	65930637	65931641	(93414332)	C	L1MEf	LINE/L1	(1901)	4245	3230	3648815
208	22.5	1.1	0.2	chr7	69257571	69258022	(90087951)	+	(TGGA)n	Simple_repeat	1	457	(0)	3656253
224	33.3	4.0	0.0	chr7	70126750	70126821	(89219152)	+	MIRb	SINE/MIR	47	121	(147)	3657904
2086	10.2	0.4	5.1	chr7	70126831	70127125	(89218848)	C	AluSx	SINE/Alu	(31)	281	1	3657905
321	26.9	10.2	2.8	chr7	70595589	70595733	(88750240)	+	MIR3	SINE/MIR	31	187	(21)	3658540
2196	9.8	0.7	0.7	chr7	73337307	73337613	(86008360)	C	AluSx1	SINE/Alu	(5)	307	1	3664386
439	24.7	0.2	0.0	chr7	73866418	73867394	(85478579)	+	(CCAT)n	Simple_repeat	1	979	(0)	3665672
1040	19.2	0.2	0.2	chr7	74048679	74050605	(85295368)	+	(CATC)n	Simple_repeat	1	1928	(0)	3666056
40	0.0	0.0	0.0	chr7	74050606	74050642	(85295331)	+	(CATT)n	Simple_repeat	1	37	(0)	3666057
188	28.1	0.8	1.1	chr7	74053633	74054163	(85291810)	+	(TGGA)n	Simple_repeat	1	535	(0)	3666066
195	21.1	17.5	0.0	chr7	75889931	75889982	(83455991)	+	L2b	LINE/L2	3313	3375	(0)	3670827
2151	12.2	0.0	1.0	chr7	75890049	75890183	(83455790)	+	AluSz	SINE/Alu	1	135	(177)	3670828
2056	7.8	7.6	0.0	chr7	75890184	75890451	(83455522)	+	AluSg7	SINE/Alu	1	290	(19)	3670829
1801	12.9	0.0	6.9	chr7	76314612	76314914	(83031059)	+	AluJo	SINE/Alu	1	282	(30)	3671851
27	0.0	0.0	0.0	chr7	77537106	77537131	(81808842)	+	(GCGGCT)n	Simple_repeat	1	26	(0)	3673970
13	23.8	0.0	2.1	chr7	77537132	77537169	(81808804)	+	G-rich	Low_complexity	8	45	(0)	3673971
34	0.0	0.0	0.0	chr7	77537204	77537234	(81808739)	+	(GGC)n	Simple_repeat	1	31	(0)	3673972
12	13.7	0.0	0.0	chr7	77537368	77537391	(81808582)	+	(GCC)n	Simple_repeat	1	24	(0)	3673973
349	30.7	0.0	0.9	chr7	77693974	77694088	(81651885)	C	MIR3	SINE/MIR	(28)	180	67	3674311
2089	12.3	0.0	1.0	chr7	77694274	77694565	(81651408)	C	AluSx	SINE/Alu	(13)	299	11	3674312
12965	7.0	0.3	0.9	chr7	77872388	77872936	(81473037)	C	HERVL-int	LTR/ERVL	(3985)	1669	1132	3674629
21	21.6	0.0	0.0	chr7	80210703	80210745	(79135228)	+	(T)n	Simple_repeat	1	43	(0)	3677847
190	24.4	4.2	0.0	chr7	80211125	80211169	(79134804)	C	MamRTE1	LINE/RTE-BovB	(2151)	1661	1615	3677848
1723	20.6	8.6	1.2	chr7	80721176	80721603	(78624370)	+	L1MB8	LINE/L1	5709	6171	(7)	3678550
858	23.9	4.0	2.7	chr7	83534609	83534827	(75811146)	+	MER58A	DNA/hAT-Charlie	2	223	(1)	3682397
42206	9.2	0.6	0.6	chr7	86088190	86093848	(73252125)	+	HERVL-int	LTR/ERVL	1	5654	(0)	3685557
48	0.0	0.0	0.0	chr7	87628585	87628625	(71717348)	+	(GT)n	Simple_repeat	1	41	(0)	3687477
21	10.7	0.0	0.0	chr7	88399752	88399781	(70946192)	+	(T)n	Simple_repeat	1	30	(0)	3688500
15600	9.3	0.7	1.3	chr7	90365676	90369954	(68976019)	C	L1P2	LINE/L1	(1904)	4242	4	3690973
2358	9.6	0.7	0.0	chr7	90582614	90582915	(68763058)	C	AluSx	SINE/Alu	(8)	304	1	3691334
632	30.3	14.7	11.1	chr7	90582916	90583464	(68762509)	+	L2b	LINE/L2	2324	2892	(527)	3691332
2167	13.8	0.0	0.0	chr7	92291012	92291308	(67054665)	+	AluSx	SINE/Alu	1	297	(15)	3693659
2147	11.0	5.9	4.0	chr7	92291309	92291465	(67054508)	+	L1MA3	LINE/L1	6145	6304	(1)	3693658
114	21.5	4.7	0.9	chr7	92423632	92423948	(66922025)	+	(TG)n	Simple_repeat	1	332	(0)	3693856
13	11.2	3.2	3.1	chr7	94657531	94657561	(64688412)	+	(AGTGG)n	Simple_repeat	1	32	(0)	3696939
1560	17.6	4.9	0.3	chr7	97972529	97972818	(61373155)	C	AluJb	SINE/Alu	(8)	304	1	3701567
1018	13.9	2.6	0.0	chr7	97972853	97973003	(61372970)	C	AluJr	SINE/Alu	(26)	286	132	3701568
37	0.0	0.0	0.0	chr7	98613741	98613772	(60732201)	+	(AC)n	Simple_repeat	1	32	(0)	3702993
2194	9.5	0.0	1.6	chr7	98792507	98792821	(60553152)	C	AluSx	SINE/Alu	(2)	310	1	3703413
400	28.1	8.2	10.4	chr7	98793217	98793466	(60552507)	C	UCON40	Unknown	(22)	293	50	3703414
4351	18.6	2.0	1.6	chr7	99086372	99087078	(60258895)	+	L1MB7	LINE/L1	5456	6168	(16)	3703936
544	25.0	8.1	0.6	chr7	99104398	99104558	(60241415)	+	MIR	SINE/MIR	3	176	(86)	3703973
604	24.6	7.1	1.0	chr7	99104565	99104766	(60241207)	C	L1ME4a	LINE/L1	(206)	5918	5699	3703972
320	27.1	4.7	0.8	chr7	99104918	99105040	(60240933)	+	MLT1N2	LTR/ERVL-MaLR	433	560	(2)	3703974
1287	7.4	0.0	18.7	chr7	99974611	99974790	(59371183)	+	L1MA2	LINE/L1	6134	6294	(10)	3705582
1460	16.8	1.5	2.6	chr7	99974813	99975110	(59370863)	+	MLT2D	LTR/ERVL	113	515	(40)	3705585
34	30.9	0.0	4.5	chr7	100827418	100827572	(58518401)	+	G-rich	Low_complexity	1	155	(0)	3707462
300	26.0	0.0	2.5	chr7	101078082	101078160	(58267813)	C	L1MDa	LINE/L1	(4116)	2517	2441	3707936
2063	12.8	0.3	0.0	chr7	101591768	101592071	(57753902)	+	AluSx1	SINE/Alu	2	306	(6)	3709184
169	24.7	0.5	0.0	chr7	101592113	101592499	(57753474)	+	(CATC)n	Simple_repeat	1	389	(0)	3709185
293	27.7	5.1	2.3	chr7	101592505	101592637	(57753336)	C	L2b	LINE/L2	(1)	3374	3238	3709186
249	25.2	18.2	0.0	chr7	101689101	101689233	(57656740)	C	MIRb	SINE/MIR	(73)	189	23	3709417
220	26.9	18.4	2.5	chr7	101689381	101689498	(57656475)	+	L2a	LINE/L2	3028	3168	(219)	3709418
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
767	25.1	1.9	1.9	chr7	105531692	105531906	(53814067)	+	HAL1	LINE/L1	584	798	(1709)	3716067
12	14.6	0.0	5.9	chr7	105531920	105531953	(53814020)	+	A-rich	Low_complexity	1	34	(0)	3716068
2981	4.2	0.0	0.0	chr7	105921248	105921600	(53424373)	+	L1PA4	LINE/L1	5803	6155	(0)	3716806
968	19.1	5.4	1.0	chr7	105921707	105921902	(53424071)	C	MER3	DNA/hAT-Charlie	(0)	209	5	3716807
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
42308	7.0	0.7	0.7	chr7	107732828	107736660	(51609313)	+	HERVL-int	LTR/ERVL	1	3835	(1819)	3719534
15	24.1	0.0	0.0	chr7	108246414	108246447	(51099526)	+	GA-rich	Low_complexity	1	34	(0)	3720271
247	19.1	0.0	0.0	chr7	108427390	108427431	(50918542)	+	L2a	LINE/L2	3377	3418	(8)	3720507
17	19.7	2.1	2.0	chr7	114086036	114086083	(45259890)	+	(CAACAA)n	Simple_repeat	1	49	(0)	3727930
373	27.7	15.3	0.6	chr7	117604881	117605047	(41740926)	+	MIRb	SINE/MIR	6	201	(67)	3732783
1101	33.1	9.3	3.0	chr7	120608935	120609544	(38736429)	C	MamRTE1	LINE/RTE-BovB	(781)	3031	2379	3736605
41014	8.3	0.9	0.3	chr7	122203020	122208641	(37137332)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3738785
615	34.2	10.2	3.4	chr7	123147859	123148412	(36197561)	+	L2	LINE/L2	319	914	(2505)	3740029
883	33.5	11.7	4.1	chr7	123637194	123638346	(35707627)	+	L2b	LINE/L2	1718	2970	(449)	3740729
224	24.2	0.0	8.8	chr7	127383537	127383604	(31962369)	C	L3	LINE/CR1	(4)	4095	4034	3745654
501	33.6	6.1	7.2	chr7	127383764	127384013	(31961960)	+	Tigger19a	DNA/TcMar-Tigger	60	306	(17)	3745655
371	25.6	12.0	0.0	chr7	128225979	128226103	(31119870)	+	MIR3	SINE/MIR	66	207	(1)	3746830
351	16.5	3.2	1.3	chr7	128226189	128226934	(31119039)	+	(CCAT)n	Simple_repeat	1	770	(0)	3746831
1033	16.0	2.7	0.0	chr7	128227025	128227205	(31118768)	+	MLT2D	LTR/ERVL	1	186	(228)	3746832
4512	15.9	6.2	6.0	chr7	128568769	128569832	(30776141)	C	L1MB2	LINE/L1	(39)	6132	5045	3747550
19	32.7	0.0	1.2	chr7	129225229	129225309	(30120664)	+	(GGCCCC)n	Simple_repeat	1	81	(0)	3748760
45728	6.1	1.4	0.3	chr7	129444646	129450234	(29895739)	C	HERVL-int	LTR/ERVL	(0)	5654	1	3749160
350	28.5	2.3	7.0	chr7	131048757	131048941	(28297032)	+	L2a	LINE/L2	705	880	(1216)	3752035
391	26.4	5.4	2.5	chr7	131383195	131383341	(27962632)	+	MLT1H2	LTR/ERVL-MaLR	16	210	(339)	3752711
397	24.8	11.6	1.4	chr7	131383391	131383597	(27962376)	+	MLT1H2	LTR/ERVL-MaLR	309	532	(17)	3752711
748	36.1	7.9	2.6	chr7	131383644	131384144	(27961829)	+	L2	LINE/L2	2484	3013	(406)	3752712
221	34.9	5.7	3.6	chr7	132288923	132289059	(27056914)	C	MIR1_Amn	SINE/MIR	(88)	142	3	3754180
436	29.3	5.8	6.3	chr7	132289260	132289525	(27056448)	+	L2a	LINE/L2	3157	3395	(31)	3754181
1939	18.3	0.0	0.7	chr7	132289526	132289831	(27056142)	C	AluJb	SINE/Alu	(7)	305	2	3754182
250	29.6	0.6	0.3	chr7	132316905	132317613	(27028360)	+	G-rich	Low_complexity	1	713	(0)	3754225
13	25.5	0.0	9.5	chr7	134127159	134127242	(25218731)	+	A-rich	Low_complexity	1	84	(0)	3757000
454	29.4	3.2	1.9	chr7	134420978	134421133	(24924840)	+	MER5A	DNA/hAT-Charlie	6	163	(26)	3757460
274	27.4	9.3	2.5	chr7	135170070	135170189	(24175784)	C	MIRb	SINE/MIR	(110)	158	30	3758537
2644	20.3	9.6	10.4	chr7	135853802	135854687	(23491286)	C	MER21C	LTR/ERVL	(4)	934	57	3759701
1984	17.3	0.3	0.3	chr7	135854694	135855005	(23490968)	C	AluJb	SINE/Alu	(0)	312	1	3759702
604	32.7	15.2	4.2	chr7	135956421	135957020	(23388953)	+	L2	LINE/L2	1352	2029	(1390)	3759886
12	20.1	2.6	2.6	chr7	135977720	135977757	(23368216)	+	(TTCC)n	Simple_repeat	1	39	(0)	3759917
12	23.1	0.0	2.6	chr7	135977742	135977779	(23368194)	+	(CCCT)n	Simple_repeat	1	38	(0)	3759918
30	16.3	5.1	4.8	chr7	140176637	140176734	(19169239)	+	(GGC)n	Simple_repeat	1	103	(0)	3766821
21	31.3	1.2	1.2	chr7	140176845	140176928	(19169045)	+	(CGC)n	Simple_repeat	1	85	(0)	3766822
298	32.4	2.7	7.8	chr7	140220421	140220574	(19125399)	C	Charlie15a	DNA/hAT-Charlie	(76)	148	3	3766918
2394	7.8	0.7	0.0	chr7	140220592	140220885	(19125088)	C	AluSp	SINE/Alu	(17)	296	1	3766919
4192	12.0	6.9	1.2	chr7	140672105	140672755	(18673218)	C	LTR8	LTR/ERV1	(0)	691	1	3767990
214	33.9	5.9	5.2	chr7	145461429	145461680	(13884293)	+	L2a	LINE/L2	2368	2621	(798)	3774663
302	37.8	8.2	6.7	chr7	145937691	145938076	(13407897)	+	L1M2	LINE/L1	1714	2105	(5461)	3775272
2632	6.8	0.0	0.0	chr7	149066212	149066519	(10279454)	+	AluSx	SINE/Alu	1	308	(4)	3779939
2300	28.2	12.1	1.7	chr7	149632139	149632965	(9713008)	+	L2	LINE/L2	1970	2894	(525)	3780962
403	34.2	4.0	0.0	chr7	149842723	149842912	(9503061)	C	HAL1	LINE/L1	(627)	1880	1683	3781225
270	26.4	7.5	13.9	chr7	149842972	149843173	(9502800)	+	L1ME4a	LINE/L1	5910	6097	(27)	3781226
4298	22.4	11.7	7.8	chr7	150927934	150929968	(8416005)	+	L1MC5	LINE/L1	6771	8713	(591)	3782664
1962	9.3	8.0	0.7	chr7	151029042	151029319	(8316654)	+	AluSz6	SINE/Alu	1	300	(12)	3782809
24	15.5	0.0	0.0	chr7	151126346	151126390	(8219583)	+	(GGAGC)n	Simple_repeat	1	45	(0)	3782947
58	0.0	0.0	0.0	chr7	151126413	151126465	(8219508)	+	(AGGCTGGGAG)n	Simple_repeat	1	53	(0)	3782948
17	17.9	2.6	0.0	chr7	151248580	151248636	(8097337)	+	(CTCT)n	Simple_repeat	1	58	(0)	3783101
31	0.0	0.0	5.3	chr7	151248739	151248776	(8097197)	+	(CGC)n	Simple_repeat	1	38	(0)	3783102
548	32.3	1.2	0.0	chr7	151263018	151263178	(8082795)	C	MIR	SINE/MIR	(68)	194	32	3783128
388	24.8	5.3	5.3	chr7	151459743	151459912	(7886061)	+	MER5A	DNA/hAT-Charlie	1	170	(19)	3783483
247	23.5	8.1	2.9	chr7	151736812	151736881	(7609092)	C	Plat_L3	LINE/CR1	(3)	3583	3510	3783969
308	30.5	5.9	0.0	chr7	151736883	151736977	(7608996)	C	MIRb	SINE/MIR	(133)	135	35	3783970
1074	25.1	13.1	1.1	chr7	152005907	152006462	(7339511)	C	L2	LINE/L2	(1032)	2387	1755	3784408
391	25.8	12.2	0.6	chr7	152006507	152006666	(7339307)	+	L2	LINE/L2	2590	2770	(649)	3784409
183	14.3	0.0	2.8	chr7	152006712	152006747	(7339226)	+	L2a	LINE/L2	3392	3426	(0)	3784410
2033	11.6	2.3	3.0	chr7	152006763	152007065	(7338908)	C	AluSz	SINE/Alu	(10)	302	2	3784411
844	22.3	11.7	0.0	chr7	152674851	152675047	(6670926)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	3785717
2960	21.7	6.0	0.1	chr7	156464524	156465193	(2880780)	+	L1MB3	LINE/L1	5471	6182	(1)	3790933
416	17.9	16.4	0.8	chr7	157110348	157110465	(2235508)	+	MER4CL34	LTR/ERV1	1	140	(625)	3791864
1318	19.9	6.3	4.0	chr7	157110459	157110526	(2235447)	+	MER4CL34	LTR/ERV1	434	496	(269)	3791864
2341	10.8	0.0	1.0	chr7	157110527	157110833	(2235140)	C	AluSz	SINE/Alu	(8)	304	1	3791865
811	16.2	4.3	0.2	chr7	157764827	157766507	(1579466)	+	(ATCC)n	Simple_repeat	1	1754	(0)	3792726
298	28.6	1.1	1.1	chr7	158524618	158524709	(821264)	+	MLT1B	LTR/ERVL-MaLR	23	114	(276)	3793330
875	24.6	5.2	0.0	chr7	158524710	158524929	(821044)	C	MER8	DNA/TcMar-Tigger	(7)	232	1	3793331
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
203	31.9	4.2	3.4	chr8	11642099	11642215	(133496421)	+	MIRb	SINE/MIR	144	261	(7)	3809927
294	24.7	6.1	6.1	chr8	17922388	17922486	(127216150)	+	MIR3	SINE/MIR	87	185	(23)	3818942
225	28.3	5.0	4.2	chr8	19758178	19758295	(125380341)	C	MIRb	SINE/MIR	(146)	122	4	3821729
2153	15.1	2.9	1.3	chr8	20133329	20133703	(125004933)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3822319
1599	23.0	8.1	4.5	chr8	22378266	22378797	(122759839)	C	MLT1E3	LTR/ERVL-MaLR	(35)	645	78	3826103
13	10.4	8.9	4.1	chr8	23336469	23336513	(121802123)	+	(GGAGT)n	Simple_repeat	1	49	(0)	3827736
472	12.0	1.3	0.0	chr8	23336642	23336716	(121801920)	C	ERVL-B4-int	LTR/ERVL	(3552)	2162	2087	3827737
2128	12.2	1.0	1.3	chr8	27706142	27706452	(117432184)	C	AluSz	SINE/Alu	(2)	310	1	3834837
504	27.6	12.6	5.8	chr8	27706969	27707380	(117431256)	+	HAL1	LINE/L1	401	844	(1663)	3834838
89	6.0	0.0	0.0	chr8	27720619	27720723	(117417913)	+	(TCCA)n	Simple_repeat	1	105	(0)	3834869
133	29.9	0.5	0.5	chr8	27720734	27721113	(117417523)	+	(ATCC)n	Simple_repeat	1	382	(0)	3834870
27	15.5	0.0	0.0	chr8	27721075	27721124	(117417512)	+	(TCCC)n	Simple_repeat	1	50	(0)	3834871
301	24.0	7.2	10.5	chr8	27721136	27721307	(117417329)	C	ORSL-2b	DNA/hAT-Tip100	(1)	507	342	3834872
17	0.0	0.0	0.0	chr8	28386490	28386508	(116752128)	+	(CA)n	Simple_repeat	1	19	(0)	3836025
703	24.6	14.2	9.4	chr8	37152878	37153290	(107985346)	C	LTR16	LTR/ERVL	(1)	437	2	3849907
1375	19.5	3.4	1.6	chr8	37316212	37316529	(107822107)	+	MER33	DNA/hAT-Charlie	1	324	(0)	3850133
326	33.3	3.6	2.2	chr8	37316936	37317070	(107821566)	+	MIRb	SINE/MIR	15	151	(117)	3850134
233	30.5	10.2	7.8	chr8	37341112	37341303	(107797333)	C	MER124	DNA?	(154)	243	47	3850165
21	16.8	0.0	0.0	chr8	37359475	37359509	(107779127)	+	A-rich	Low_complexity	1	35	(0)	3850195
267	30.1	2.8	0.0	chr8	37360024	37360126	(107778510)	+	MIR3	SINE/MIR	48	153	(55)	3850196
328	36.5	4.2	2.1	chr8	37398339	37398478	(107740158)	+	L2b	LINE/L2	3230	3372	(3)	3850254
1689	17.7	0.6	5.2	chr8	37584864	37585180	(107553456)	+	AluJo	SINE/Alu	1	304	(8)	3850571
35	4.0	3.7	1.8	chr8	37585181	37585234	(107553402)	+	(TGGAAATAAT)n	Simple_repeat	1	56	(0)	3850572
529	31.0	10.0	0.6	chr8	37585244	37585326	(107553310)	+	MIR	SINE/MIR	152	235	(27)	3850570
1792	18.8	1.0	0.3	chr8	37585665	37585972	(107552664)	C	AluJr	SINE/Alu	(0)	312	3	3850573
768	27.8	5.6	11.8	chr8	37723000	37723729	(107414907)	+	L2a	LINE/L2	2730	3422	(4)	3850860
24	20.9	0.0	0.0	chr8	37723730	37723784	(107414852)	+	(TGAAT)n	Simple_repeat	1	55	(0)	3850861
15	27.5	0.0	1.9	chr8	38996645	38996698	(106141938)	+	(TCTGCT)n	Simple_repeat	1	54	(0)	3853348
21	16.2	0.0	4.4	chr8	38996919	38996963	(106141673)	+	(CG)n	Simple_repeat	1	45	(0)	3853349
224	29.2	9.4	2.8	chr8	41097312	41097420	(104041216)	C	L2b	LINE/L2	(16)	3359	3243	3856411
29	7.9	0.0	0.0	chr8	41097576	41097616	(104041020)	+	(TCCAA)n	Simple_repeat	1	41	(0)	3856412
15803	15.8	4.6	3.5	chr8	42025508	42029559	(103109077)	C	L1MA4A	LINE/L1	(747)	6815	2678	3857997
673	23.3	2.1	0.4	chr8	42451134	42452767	(102685869)	+	GA-rich	Low_complexity	1	1668	(0)	3858811
771	21.7	11.4	0.4	chr8	42524226	42524466	(102614170)	+	L1MC5	LINE/L1	9025	9295	(9)	3858949
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
2162	21.9	4.2	1.2	chr8	42673546	42674094	(102464542)	+	L1ME3	LINE/L1	5592	6162	(0)	3859260
185	31.2	8.4	7.6	chr8	42674441	42674558	(102464078)	+	L2b	LINE/L2	3257	3375	(0)	3859256
240	14.2	0.0	0.8	chr8	42674559	42674954	(102463682)	+	(GGAT)n	Simple_repeat	1	396	(0)	3859261
2348	22.2	4.9	5.2	chr8	43130950	43131424	(102007212)	C	L1ME2	LINE/L1	(256)	5908	5432	3860166
837	16.1	2.1	0.0	chr8	43131427	43131563	(102007073)	C	FRAM	SINE/Alu	(4)	172	33	3860168
2450	20.6	18.9	2.9	chr8	43131569	43131711	(102006925)	C	L1ME2	LINE/L1	(1185)	4961	4805	3860166
314	23.4	3.5	6.7	chr8	49987319	49987437	(95151199)	+	L1MB8	LINE/L1	56	170	(6697)	3865106
860	23.4	1.0	0.0	chr8	49987407	49987598	(95151038)	+	L1MB8	LINE/L1	896	1089	(5778)	3865106
2036	10.7	0.0	0.0	chr8	49987650	49987912	(95150724)	C	AluY	SINE/Alu	(13)	298	36	3865107
2298	7.5	0.0	0.7	chr8	52442018	52442324	(92696312)	C	AluSc8	SINE/Alu	(0)	311	2	3868138
422	20.6	0.0	0.0	chr8	52442695	52442767	(92695869)	+	U4	snRNA	2	74	(71)	3868139
722	15.2	9.4	1.2	chr8	52442828	52442993	(92695643)	+	MER53	DNA/hAT	13	193	(0)	3868140
15	4.1	0.0	6.9	chr8	52448652	52448680	(92689956)	+	(TGTA)n	Simple_repeat	1	29	(0)	3868153
303	25.7	3.4	2.6	chr8	52449506	52449621	(92689015)	+	L4_A_Mam	LINE/RTE-X	2922	3038	(1952)	3868154
5043	20.1	7.7	10.1	chr8	52636666	52637381	(92501255)	C	L1M4	LINE/L1	(1062)	5084	4338	3868418
688	20.8	2.4	0.0	chr8	52637382	52637501	(92501135)	C	FLAM_A	SINE/Alu	(19)	123	1	3868419
5043	20.1	7.7	10.1	chr8	52637502	52637658	(92500978)	C	L1M4	LINE/L1	(1062)	4337	4173	3868418
17	16.4	0.0	0.0	chr8	53939687	53939720	(91198916)	+	(TGC)n	Simple_repeat	1	34	(0)	3870169
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
331	31.4	7.1	0.0	chr8	57560993	57561110	(87577526)	+	MIRb	SINE/MIR	121	247	(21)	3875491
13	14.2	3.2	0.0	chr8	57561372	57561402	(87577234)	+	(CCAGGC)n	Simple_repeat	1	32	(0)	3875492
434	34.8	9.5	1.2	chr8	57599565	57599901	(87538735)	C	L2a	LINE/L2	(0)	3426	3059	3875532
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
12	5.6	0.0	0.0	chr8	63168758	63168776	(81969860)	+	(CGG)n	Simple_repeat	1	19	(0)	3882839
14	5.0	0.0	0.0	chr8	63168838	63168858	(81969778)	+	(GGC)n	Simple_repeat	1	21	(0)	3882840
13	17.5	0.0	2.9	chr8	63169077	63169110	(81969526)	+	(GCGG)n	Simple_repeat	1	34	(0)	3882841
1385	14.2	0.7	1.3	chr8	63844569	63844793	(81293843)	+	MLT1A0	LTR/ERVL-MaLR	88	315	(50)	3883742
1045	31.2	8.2	1.8	chr8	63844811	63845344	(81293292)	+	L2a	LINE/L2	2843	3421	(5)	3883737
7773	20.2	5.7	4.5	chr8	65973806	65974145	(79164491)	+	MLT1A1-int	LTR/ERVL-MaLR	1387	1735	(0)	3886691
1752	19.0	12.3	0.0	chr8	65974146	65974503	(79164133)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3886691
7790	21.4	4.2	5.4	chr8	65974504	65976254	(79162382)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1729	(6)	3886691
543	0.0	0.0	21.5	chr8	66113367	66113459	(79025177)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886877
563	0.0	0.0	18.0	chr8	66113988	66114076	(79024560)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886878
16	23.2	0.0	2.1	chr8	66712880	66712926	(78425710)	+	(GGCGG)n	Simple_repeat	1	47	(0)	3887940
13	13.1	0.0	0.0	chr8	69834860	69834884	(75303752)	+	(GTCT)n	Simple_repeat	1	25	(0)	3892661
12	21.5	2.5	2.4	chr8	69835110	69835149	(75303487)	+	(CAGC)n	Simple_repeat	1	41	(0)	3892662
1107	33.7	13.0	0.9	chr8	70666591	70667324	(74471312)	C	L2b	LINE/L2	(614)	2805	1970	3894214
1524	26.1	3.3	3.5	chr8	70667477	70667873	(74470763)	+	MamRep137	DNA/TcMar-Tigger	78	473	(37)	3894216
2225	23.5	6.6	1.9	chr8	70702213	70702937	(74435699)	C	L1M4a2	LINE/L1	(3279)	2867	2126	3894270
751	27.0	10.8	2.1	chr8	70702916	70703293	(74435343)	C	L1M4a1	LINE/L1	(833)	1746	1332	3894271
1286	17.1	16.5	1.3	chr8	70703330	70703637	(74434999)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	1	3894272
206	21.6	8.3	7.4	chr8	71770793	71770887	(73367749)	+	L2a	LINE/L2	2447	2542	(877)	3895655
584	29.6	5.2	4.7	chr8	71770925	71771170	(73367466)	+	MIRb	SINE/MIR	26	265	(3)	3895656
240	37.1	1.3	5.0	chr8	71925235	71925393	(73213243)	+	MIRb	SINE/MIR	39	191	(77)	3895837
1789	16.3	0.7	2.4	chr8	73089884	73090177	(72048459)	C	AluJb	SINE/Alu	(22)	290	2	3897403
242	28.4	11.4	0.0	chr8	73090179	73090287	(72048349)	C	MIRc	SINE/MIR	(109)	159	37	3897404
186	25.0	5.1	3.5	chr8	78516730	78516787	(66621849)	+	OldhAT1	DNA/hAT-Ac	2483	2541	(307)	3904792
25	11.7	0.0	0.0	chr8	80011114	80011150	(65127486)	+	(T)n	Simple_repeat	1	37	(0)	3906863
13	24.9	0.0	0.0	chr8	80011379	80011416	(65127220)	+	(TTCTTT)n	Simple_repeat	1	38	(0)	3906864
2291	10.8	1.6	0.0	chr8	80011472	80011778	(65126858)	+	AluSz	SINE/Alu	1	312	(0)	3906865
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
2475	25.0	6.2	7.0	chr8	90975373	90976305	(54162331)	+	L1ME1	LINE/L1	5425	6351	(1)	3921882
15	5.5	0.0	0.0	chr8	93916685	93916703	(51221933)	+	(G)n	Simple_repeat	1	19	(0)	3926054
15	24.9	0.0	0.0	chr8	93916808	93916850	(51221786)	+	(CCGCCC)n	Simple_repeat	1	43	(0)	3926055
44555	6.7	0.9	0.8	chr8	94300899	94303106	(50835530)	C	HERVL-int	LTR/ERVL	(3464)	2190	1	3926617
1353	20.8	7.7	9.3	chr8	94321929	94322058	(50816578)	+	MER57C2	LTR/ERV1	278	401	(33)	3926639
789	26.4	12.6	3.4	chr8	94322075	94322340	(50816296)	+	MER57A-int	LTR/ERV1	3	296	(5891)	3926639
260	34.9	2.9	2.5	chr8	94322385	94322622	(50816014)	+	MER57A-int	LTR/ERV1	941	1179	(6434)	3926639
1160	33.1	9.0	2.6	chr8	94421075	94421955	(50716681)	+	L2	LINE/L2	1905	2847	(572)	3926790
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
18	29.3	0.0	0.0	chr8	94949388	94949445	(50189191)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3927879
1745	12.3	2.6	10.8	chr8	95268166	95268497	(49870139)	+	AluJo	SINE/Alu	2	305	(7)	3928505
47	0.0	0.0	0.0	chr8	95268752	95268794	(49869842)	+	(GGGCG)n	Simple_repeat	1	43	(0)	3928506
390	25.4	0.8	6.7	chr8	96172051	96172168	(48966468)	+	Charlie9	DNA/hAT-Charlie	1	111	(2646)	3929850
58	1.8	0.0	0.0	chr8	96172169	96172225	(48966411)	+	(GAATG)n	Simple_repeat	1	57	(0)	3929851
390	25.4	0.8	6.7	chr8	96172226	96172241	(48966395)	+	Charlie9	DNA/hAT-Charlie	112	127	(2630)	3929850
36	2.6	2.6	0.0	chr8	96172290	96172328	(48966308)	+	(TG)n	Simple_repeat	1	40	(0)	3929852
2715	4.5	0.0	0.0	chr8	97774712	97775020	(47363616)	+	AluY	SINE/Alu	2	310	(1)	3932410
2504	6.0	0.3	0.3	chr8	97775242	97775543	(47363093)	+	AluSq2	SINE/Alu	1	302	(11)	3932411
1788	16.1	11.2	2.6	chr8	98733862	98734251	(46404385)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3934085
359	37.7	7.6	1.7	chr8	98734259	98734433	(46404203)	C	MIRb	SINE/MIR	(36)	194	9	3934086
16	19.0	4.5	5.7	chr8	98825936	98826002	(46312634)	+	(GGCG)n	Simple_repeat	1	70	(0)	3934229
29	23.9	1.9	3.7	chr8	98826003	98826021	(46312615)	+	(GGCCGG)n	Simple_repeat	51	107	(0)	3934228
352	28.4	13.3	13.0	chr8	98866578	98866634	(46272002)	C	MIRb	SINE/MIR	(16)	252	201	3934331
1254	25.1	6.7	5.3	chr8	98866635	98867064	(46271572)	C	LTR16	LTR/ERVL	(2)	436	1	3934332
29492	5.9	0.4	2.4	chr8	100203385	100205734	(44932902)	+	HERVL-int	LTR/ERVL	1	2323	(3331)	3936369
445	30.7	8.6	0.9	chr8	102614043	102614256	(42524380)	C	MIRb	SINE/MIR	(18)	250	19	3940747
2750	18.3	10.7	12.5	chr8	102942343	102942454	(42196182)	C	MER21C	LTR/ERVL	(9)	929	821	3941425
120	5.7	0.7	0.7	chr8	102942455	102942603	(42196033)	+	(ATCCC)n	Simple_repeat	1	150	(0)	3941426
2750	18.3	10.7	12.5	chr8	102942604	102942718	(42195918)	C	MER21C	LTR/ERVL	(118)	820	707	3941425
1411	11.4	5.1	1.9	chr8	102942719	102942957	(42195679)	C	AluSx3	SINE/Alu	(0)	311	65	3941427
202	18.2	0.0	0.0	chr8	103020634	103020666	(42117970)	+	MIRb	SINE/MIR	217	249	(19)	3941610
181	29.8	0.0	2.1	chr8	103020638	103020685	(42117951)	+	L2a	LINE/L2	3375	3421	(5)	3941611
19	15.2	8.7	2.7	chr8	103020989	103021057	(42117579)	+	(CGGCAG)n	Simple_repeat	1	75	(0)	3941612
2167	11.5	0.3	0.0	chr8	105271496	105271782	(39866854)	C	AluSx1	SINE/Alu	(20)	292	5	3944918
11679	22.6	4.8	3.4	chr8	105271783	105272669	(39865967)	C	L1M4b	LINE/L1	(5819)	1048	98	3944916
3253	14.7	4.2	2.7	chr8	106059649	106060242	(39078394)	+	LTR26	LTR/ERV1	1	603	(0)	3945969
15	25.1	5.6	0.0	chr8	106060244	106060297	(39078339)	+	GA-rich	Low_complexity	1	57	(0)	3945970
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
199	20.9	4.4	0.0	chr8	109645521	109645563	(35493073)	+	MIRc	SINE/MIR	20	64	(204)	3951140
836	23.1	0.0	0.0	chr8	109645628	109645796	(35492840)	C	FRAM	SINE/Alu	(0)	176	8	3951141
3021	14.8	5.8	0.0	chr8	109881463	109881970	(35256666)	C	LTR26C	LTR/ERV1	(0)	539	1	3951427
2160	23.0	6.5	5.1	chr8	109881971	109882183	(35256453)	+	MER77	LTR/ERVL	403	598	(6)	3951426
4180	14.8	1.7	0.4	chr8	116887117	116887808	(28250828)	C	LTR41C	LTR/ERVL	(0)	701	1	3960782
212	36.6	2.1	0.0	chr8	117520346	117520438	(27618198)	+	MIR	SINE/MIR	20	114	(148)	3961723
304	30.7	8.0	0.7	chr8	119645085	119645235	(25493401)	C	MIRc	SINE/MIR	(104)	164	2	3965115
1838	16.1	3.3	0.7	chr8	120153187	120153484	(24985152)	C	AluJb	SINE/Alu	(6)	306	1	3966179
247	32.7	9.2	5.0	chr8	120153860	120154097	(24984539)	C	MLT1K	LTR/ERVL-MaLR	(346)	249	1	3966180
230	17.9	6.9	1.5	chr8	123057697	123057764	(22080872)	+	L1M5	LINE/L1	5741	5812	(312)	3971073
475	27.9	9.3	0.0	chr8	123061492	123061638	(22076998)	+	MIRb	SINE/MIR	1	162	(106)	3971086
2995	7.1	9.7	0.0	chr8	123061660	123062068	(22076568)	+	MLT2A2	LTR/ERVL	1	453	(0)	3971087
2155	15.1	0.5	9.2	chr8	124339222	124339542	(20799094)	+	MER57C1	LTR/ERV1	101	385	(0)	3973525
15	3.9	0.0	6.7	chr8	124339697	124339726	(20798910)	+	(GATTG)n	Simple_repeat	1	30	(0)	3973527
2972	20.6	0.5	0.3	chr8	124987055	124987624	(20151012)	+	ERVL-int	LTR/ERVL	1	571	(5143)	3974730
24492	13.3	4.3	0.8	chr8	124987618	124991707	(20146929)	+	ERVL-int	LTR/ERVL	1493	5757	(0)	3974730
457	23.5	0.0	0.0	chr8	127725609	127725723	(17412913)	C	L1PB4	LINE/L1	(0)	6156	6042	3979937
264	20.4	0.0	0.0	chr8	127725724	127725772	(17412864)	C	Charlie9	DNA/hAT-Charlie	(2702)	55	7	3979938
64	12.6	0.0	7.9	chr8	127898200	127898351	(17240285)	+	GA-rich	Low_complexity	1	152	(0)	3980356
184	28.7	0.9	10.7	chr8	127898905	127899025	(17239611)	C	LFSINE_Vert	SINE/tRNA	(280)	179	71	3980357
579	31.3	8.9	1.4	chr8	130447574	130447852	(14690784)	C	L2	LINE/L2	(1246)	2173	1872	3985048
245	36.2	1.7	0.1	chr8	131916035	131916147	(13222489)	+	L2a	LINE/L2	3256	3425	(1)	3987636
329	28.2	13.5	5.8	chr8	131916171	131916531	(13222105)	C	L2a	LINE/L2	(612)	2807	2415	3987635
218	8.8	0.0	2.1	chr8	132966926	132967265	(12171371)	+	(TCCA)n	Simple_repeat	1	340	(0)	3989519
455	32.7	15.6	3.4	chr8	135377776	135378218	(9760418)	C	LTR16E1	LTR/ERVL	(3)	535	29	3993919
1836	11.8	8.7	1.7	chr8	140463410	140463696	(4674940)	C	AluJb	SINE/Alu	(3)	309	1	4002001
1571	29.8	19.6	2.7	chr8	141515349	141516712	(3621924)	+	L2b	LINE/L2	670	2367	(1052)	4003731
298	24.0	2.6	5.1	chr8	141516957	141517035	(3621601)	+	L2a	LINE/L2	3337	3413	(13)	4003733
154	26.3	1.9	2.1	chr8	141625971	141626538	(3512098)	+	(TGGA)n	Simple_repeat	1	567	(0)	4003907
359	24.1	9.3	3.5	chr8	141626616	141626770	(3511866)	+	MIR3	SINE/MIR	18	186	(22)	4003908
545	23.3	1.7	0.2	chr8	142149966	142151213	(2987423)	+	(ATGG)n	Simple_repeat	1	1269	(0)	4004582
1028	6.7	4.1	3.4	chr8	142221654	142223680	(2914956)	+	(CACTCACT)n	Simple_repeat	1	2110	(0)	4004668
27	4.9	4.8	0.0	chr8	142791452	142791493	(2347143)	+	(CATC)n	Simple_repeat	1	44	(0)	4005313
417	18.5	4.7	0.2	chr8	142791496	142792019	(2346617)	+	(CCAT)n	Simple_repeat	1	546	(0)	4005314
3154	3.2	0.3	0.0	chr8	142792020	142792391	(2346245)	+	L1PA4	LINE/L1	5783	6155	(0)	4005315
417	18.5	4.7	0.2	chr8	142792392	142792821	(2345815)	+	(CCAT)n	Simple_repeat	3	453	(0)	4005316
313	9.8	2.3	1.9	chr8	143391895	143392503	(1746133)	+	(CATC)n	Simple_repeat	1	623	(0)	4006159
249	26.4	2.2	0.9	chr8	143418073	143418692	(1719944)	+	(CCAC)n	Simple_repeat	1	631	(0)	4006193
28	5.5	0.0	2.5	chr8	143418693	143418732	(1719904)	+	(CCAT)n	Simple_repeat	1	40	(0)	4006194
249	26.4	2.2	0.9	chr8	143418733	143418834	(1719802)	+	(CCAC)n	Simple_repeat	4	104	(0)	4006195
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
14	31.9	3.9	0.0	chr8	143733516	143733592	(1405044)	+	(GCCCC)n	Simple_repeat	1	80	(0)	4006585
15	7.8	0.0	3.5	chr8	143733637	143733665	(1404971)	+	(CGCCC)n	Simple_repeat	1	29	(0)	4006586
38	28.9	5.0	2.4	chr8	143779456	143779657	(1358979)	+	(ATTC)n	Simple_repeat	1	212	(0)	4006669
416	28.0	10.8	1.1	chr8	143779666	143779849	(1358787)	+	MIRb	SINE/MIR	65	268	(0)	4006670
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
12	17.6	3.1	0.0	chr8	144147411	144147442	(991194)	+	(CCTCCG)n	Simple_repeat	1	33	(0)	4007189
17	22.6	1.4	5.7	chr8	144374133	144374201	(764435)	+	(CCCGAGA)n	Simple_repeat	1	70	(0)	4007537
1600	17.4	5.4	0.0	chr8	144374209	144374490	(764146)	C	AluJb	SINE/Alu	(11)	301	4	4007538
602	22.9	7.9	1.1	chr8	144853757	144853933	(284703)	+	L1M4	LINE/L1	5295	5484	(700)	4008206
445	13.5	2.6	0.0	chr8	144853934	144854007	(284629)	+	AluYh3	SINE/Alu	1	76	(235)	4008207
878	15.0	0.7	0.7	chr8	144854011	144854164	(284472)	C	MSTA	LTR/ERVL-MaLR	(274)	154	1	4008208
732	23.4	3.1	1.9	chr8	144854206	144854366	(284270)	+	AluJb	SINE/Alu	1	163	(149)	4008209
601	21.7	13.9	3.9	chr9	998153	998358	(137396359)	C	MIR	SINE/MIR	(0)	262	33	4010102
631	34.3	16.6	2.2	chr9	1987520	1988363	(136406354)	C	L2	LINE/L2	(1170)	2249	1261	4011510
242	34.2	4.8	2.4	chr9	2843147	2843269	(135551448)	+	L2	LINE/L2	2851	2976	(443)	4012732
2920	3.6	0.0	0.0	chr9	2843571	2843877	(135550840)	C	AluY	SINE/Alu	(4)	307	1	4012733
462	33.3	13.7	3.2	chr9	2859735	2860171	(135534546)	+	L3	LINE/CR1	2566	3055	(1044)	4012764
187	27.9	5.5	4.4	chr9	3027540	3027629	(135367088)	C	MIRb	SINE/MIR	(58)	210	120	4013028
225	36.1	0.0	0.0	chr9	4683535	4683606	(133711111)	C	L2	LINE/L2	(445)	2974	2903	4015470
1625	17.2	0.3	8.5	chr9	4802817	4803147	(133591570)	C	AluJo	SINE/Alu	(8)	304	1	4015700
13668	6.8	1.5	0.6	chr9	5738653	5740418	(132654299)	C	HERVL-int	LTR/ERVL	(3872)	1782	1	4016957
2172	19.2	3.5	4.5	chr9	6023564	6023887	(132370830)	+	L1MC5a	LINE/L1	1745	2075	(702)	4017422
645	29.1	12.2	0.4	chr9	6023888	6024146	(132370571)	+	LTR50	LTR/ERVL	8	301	(494)	4017424
504	26.5	16.5	4.3	chr9	6024194	6024473	(132370244)	+	LTR50	LTR/ERVL	322	793	(2)	4017424
1869	27.2	13.4	6.4	chr9	6079232	6080313	(132314404)	+	HERVI-int	LTR/ERV1	14	1171	(6614)	4017508
37184	19.1	1.2	2.1	chr9	6080644	6087331	(132307386)	+	HERVI-int	LTR/ERV1	1144	7769	(16)	4017508
202	31.7	7.9	5.8	chr9	6764785	6765092	(131629625)	+	L2c	LINE/L2	2395	2709	(710)	4018707
252	29.9	8.4	12.6	chr9	6765274	6765637	(131629080)	+	L2c	LINE/L2	3039	3385	(2)	4018707
25	10.0	2.3	0.0	chr9	13587817	13587859	(124806858)	+	(CCT)n	Simple_repeat	1	44	(0)	4027850
713	28.1	9.9	3.8	chr9	14192462	14192890	(124201827)	+	LTR33A	LTR/ERVL	21	520	(0)	4028643
13	23.3	0.0	0.0	chr9	14243650	14243684	(124151033)	+	(TTATT)n	Simple_repeat	1	35	(0)	4028702
13	9.8	0.0	0.0	chr9	14313779	14313800	(124080917)	+	(GCC)n	Simple_repeat	1	22	(0)	4028782
13	14.1	3.0	2.9	chr9	14313833	14313865	(124080852)	+	(TTG)n	Simple_repeat	1	34	(0)	4028783
23	16.3	0.0	6.5	chr9	14313943	14314004	(124080713)	+	(GGCG)n	Simple_repeat	1	62	(0)	4028784
654	23.1	6.8	8.0	chr9	14913119	14913429	(123481288)	+	L1M5	LINE/L1	3697	4003	(2143)	4029622
1034	27.2	6.5	2.2	chr9	14913451	14913946	(123480771)	+	L1M5	LINE/L1	4110	4628	(1518)	4029622
20	10.0	0.0	0.0	chr9	15694638	15694670	(122700047)	+	(ATCCA)n	Simple_repeat	1	33	(0)	4030971
239	31.1	8.6	0.9	chr9	15694748	15694854	(122699863)	+	L2	LINE/L2	2651	2766	(653)	4030969
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
723	29.3	2.8	1.9	chr9	20315692	20315900	(118078817)	+	MLT1O	LTR/ERVL-MaLR	54	264	(278)	4037717
18	15.0	0.0	0.0	chr9	20316062	20316091	(118078626)	+	(T)n	Simple_repeat	1	30	(0)	4037718
2238	15.9	5.3	1.2	chr9	21391662	21392075	(117002642)	C	Tigger2a	DNA/TcMar-Tigger	(1)	433	2	4039165
14	20.8	1.2	10.8	chr9	21974812	21974893	(116419824)	+	(CCG)n	Simple_repeat	1	83	(0)	4039935
5047	22.2	2.2	5.5	chr9	24702623	24703847	(113690870)	+	L1MB8	LINE/L1	11	1194	(5673)	4043424
17	3.6	6.9	0.0	chr9	24703871	24703899	(113690818)	+	(CAA)n	Simple_repeat	1	31	(0)	4043425
311	25.3	10.8	2.1	chr9	26945441	26945533	(111449184)	C	L3	LINE/CR1	(6)	4093	3992	4046391
438	34.1	3.8	0.0	chr9	26945514	26945689	(111449028)	+	L2c	LINE/L2	2683	2865	(554)	4046392
242	30.8	13.9	11.2	chr9	26945760	26946088	(111448629)	+	L2c	LINE/L2	3049	3387	(0)	4046392
1457	9.5	1.0	0.0	chr9	27388470	27388659	(111006058)	C	L1PB1	LINE/L1	(3)	6148	5957	4047069
852	31.5	8.8	5.6	chr9	27388688	27389135	(111005582)	+	L2a	LINE/L2	2437	2910	(509)	4047070
32	2.1	6.0	1.9	chr9	29211545	29211594	(109183123)	+	(CTTCT)n	Simple_repeat	1	53	(0)	4049633
13591	17.5	9.1	4.3	chr9	33322218	33323472	(105071245)	+	L1M4b	LINE/L1	116	1523	(5344)	4055201
755	27.0	2.2	3.1	chr9	33866572	33866800	(104527917)	C	L1ME3A	LINE/L1	(38)	6135	5909	4056164
869	20.3	1.7	8.3	chr9	33866803	33867055	(104527662)	C	L1M5	LINE/L1	(855)	5291	5056	4056165
267	13.3	0.0	0.0	chr9	33867060	33867104	(104527613)	C	L1MB4	LINE/L1	(1)	6179	6135	4056166
727	8.4	0.0	0.0	chr9	33867105	33867187	(104527530)	C	AluYi6	SINE/Alu	(228)	83	1	4056167
1466	20.2	15.3	1.8	chr9	33867211	33867704	(104527013)	C	L1ME3A	LINE/L1	(273)	5900	5328	4056164
21	14.2	0.0	0.0	chr9	34665385	34665423	(103729294)	+	(GGGCG)n	Simple_repeat	1	39	(0)	4057758
2442	7.8	0.0	0.0	chr9	35610970	35611264	(102783453)	+	AluY	SINE/Alu	1	295	(16)	4059157
2992	18.7	4.3	2.6	chr9	35877222	35877880	(102516837)	C	L1ME1	LINE/L1	(5314)	1553	883	4059545
1518	23.0	2.0	0.0	chr9	35877867	35878209	(102516508)	C	L1MEc	LINE/L1	(3464)	2857	2508	4059550
440	23.2	2.9	2.9	chr9	36190486	36190587	(102204130)	C	MIRc	SINE/MIR	(69)	199	98	4060131
1243	16.9	15.9	7.7	chr9	37753282	37753510	(100641207)	C	MER4D0	LTR/ERV1	(608)	264	2	4063318
498	21.1	13.5	0.0	chr9	38037491	38037618	(100357099)	+	MIR	SINE/MIR	19	166	(96)	4063822
2569	5.2	1.3	0.3	chr9	39020611	39020916	(99373801)	C	AluY	SINE/Alu	(1)	310	2	4065520
2596	6.2	0.0	0.7	chr9	39021107	39021412	(99373305)	C	AluY	SINE/Alu	(7)	304	1	4065521
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
14	17.1	11.9	0.0	chr9	68705180	68705238	(69689479)	+	(GGCAGCC)n	Simple_repeat	1	66	(0)	4080300
35	0.0	5.0	0.0	chr9	68705613	68705652	(69689065)	+	(CCCCTCCCG)n	Simple_repeat	1	42	(0)	4080301
480	25.5	7.9	2.5	chr9	69675127	69675386	(68719331)	+	L4_B_Mam	LINE/RTE-X	4637	5105	(33)	4081938
1730	17.1	2.4	0.3	chr9	69675470	69675755	(68718962)	+	AluJr	SINE/Alu	2	293	(19)	4081939
18	4.7	0.0	0.0	chr9	69760011	69760032	(68634685)	+	(CG)n	Simple_repeat	1	22	(0)	4082050
16	10.7	3.3	0.0	chr9	69760047	69760076	(68634641)	+	(GCC)n	Simple_repeat	1	31	(0)	4082051
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
296	26.2	1.9	3.7	chr9	70038730	70038836	(68355881)	+	MER102c	DNA/hAT-Charlie	201	305	(26)	4082517
17	0.0	0.0	0.0	chr9	70509711	70509732	(67884985)	+	(ATTT)n	Simple_repeat	1	22	(0)	4083312
448	27.2	7.0	0.0	chr9	70509886	70510043	(67884674)	+	MamRep564	Unknown	69	238	(119)	4083313
261	29.1	17.5	1.8	chr9	70746760	70746898	(67647819)	C	MIRb	SINE/MIR	(103)	165	2	4083680
188	26.6	9.2	14.2	chr9	70747076	70747237	(67647480)	C	L2a	LINE/L2	(0)	3426	3274	4083683
327	24.3	0.0	0.0	chr9	71285088	71285157	(67109560)	+	Arthur1B	DNA/hAT-Tip100	79	148	(1077)	4084447
234	18.0	4.7	10.3	chr9	71285152	71285219	(67109498)	+	Arthur1B	DNA/hAT-Tip100	1148	1211	(14)	4084448
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
12	29.1	4.0	2.6	chr9	71446942	71447015	(66947702)	+	(GCCTCC)n	Simple_repeat	1	77	(0)	4084667
288	27.9	14.4	8.7	chr9	74770580	74771003	(63623714)	+	L2a	LINE/L2	1536	1987	(1432)	4089900
683	27.9	4.4	16.3	chr9	74771025	74771564	(63623153)	+	L2a	LINE/L2	2954	3426	(0)	4089900
534	26.3	12.7	1.1	chr9	74886711	74886898	(63507819)	C	MIR	SINE/MIR	(31)	231	19	4090130
77	8.8	0.0	0.0	chr9	76175202	76175310	(62219407)	+	(GAATG)n	Simple_repeat	1	109	(0)	4092041
20	6.9	0.0	0.0	chr9	76175311	76175341	(62219376)	+	(AGAAC)n	Simple_repeat	1	31	(0)	4092042
565	29.3	5.5	2.0	chr9	76175445	76175744	(62218973)	C	L1M5	LINE/L1	(317)	5807	5497	4092043
23	6.2	0.0	0.0	chr9	76375169	76375202	(62019515)	+	(AACAAA)n	Simple_repeat	1	34	(0)	4092411
36	28.8	4.7	2.5	chr9	78031679	78031871	(60362846)	+	(GCCCCC)n	Simple_repeat	1	202	(0)	4095147
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
24	21.3	2.5	3.6	chr9	78032030	78032043	(60362674)	+	G-rich	Low_complexity	3	83	(0)	4095149
310	27.7	0.8	0.1	chr9	78319911	78320688	(60074029)	+	(TCCA)n	Simple_repeat	1	784	(0)	4095593
197	36.0	0.0	1.1	chr9	78320690	78320776	(60073941)	C	L2a	LINE/L2	(1)	3425	3340	4095594
26	20.9	1.8	0.0	chr9	79257119	79257174	(59137543)	+	(CT)n	Simple_repeat	1	57	(0)	4096976
1640	22.5	3.0	2.2	chr9	79686382	79686836	(58707881)	+	MLT1C	LTR/ERVL-MaLR	7	465	(2)	4097598
214	27.9	6.0	1.2	chr9	81389647	81389726	(57004991)	+	L2b	LINE/L2	3287	3370	(5)	4099828
186	31.7	8.2	2.4	chr9	81389791	81389916	(57004801)	C	MamTip2	DNA/hAT-Tip100	(147)	158	25	4099829
330	21.0	11.8	9.3	chr9	81689313	81689527	(56705190)	C	MER52D	LTR/ERV1	(1852)	271	51	4100305
412	32.2	5.5	0.7	chr9	82829606	82829787	(55564930)	+	MIRb	SINE/MIR	49	255	(13)	4102002
549	26.8	18.2	10.8	chr9	83195780	83196206	(55198511)	C	L2a	LINE/L2	(544)	2875	2410	4102514
304	18.8	5.9	2.4	chr9	83196253	83196334	(55198383)	C	LTR65	LTR/ERV1	(284)	385	301	4102515
16	0.0	0.0	0.0	chr9	86947767	86947783	(51446934)	+	(T)n	Simple_repeat	1	17	(0)	4108707
2144	13.0	0.3	1.0	chr9	88050426	88050726	(50343991)	C	AluSx1	SINE/Alu	(13)	299	1	4110393
800	28.9	10.8	5.0	chr9	89708823	89709380	(48685337)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	2	4112848
112	3.8	2.1	2.0	chr9	89709425	89709568	(48685149)	+	(TTTC)n	Simple_repeat	1	147	(0)	4112849
925	33.6	9.4	1.9	chr9	89900367	89901228	(48493489)	C	L2a	LINE/L2	(0)	3426	2479	4113116
212	31.1	13.3	5.6	chr9	89901298	89901621	(48493096)	C	L2	LINE/L2	(627)	2792	2440	4113117
27	19.2	10.4	0.8	chr9	90642901	90643015	(47751702)	+	(CGCCCTG)n	Simple_repeat	1	127	(0)	4114122
279	22.6	41.5	4.5	chr9	91419595	91419730	(46974987)	+	MIRc	SINE/MIR	80	267	(1)	4115183
4384	14.8	9.1	4.0	chr9	91500188	91501043	(46893674)	C	MER49	LTR/ERV1	(19)	904	1	4115281
216	18.5	2.2	0.4	chr9	91583162	91583606	(46811111)	+	(ATGG)n	Simple_repeat	1	455	(0)	4115417
2831	18.2	5.5	0.2	chr9	91994416	91994971	(46399746)	C	MER34A1	LTR/ERV1	(0)	587	1	4116050
134	28.0	2.4	1.9	chr9	92184029	92184493	(46210224)	+	(CCAT)n	Simple_repeat	1	476	(0)	4116309
8996	18.3	6.6	1.4	chr9	92781264	92783192	(45611525)	+	ERVL-B4-int	LTR/ERVL	586	2655	(3059)	4117212
529	20.1	1.6	1.5	chr9	93210939	93212117	(45182600)	+	(CTCA)n	Simple_repeat	1	1198	(0)	4117896
606	25.9	0.3	0.3	chr9	93661375	93662796	(44731921)	+	(ATGG)n	Simple_repeat	1	1426	(0)	4118431
504	33.9	9.0	8.1	chr9	94028618	94029012	(44365705)	+	L2b	LINE/L2	2976	3374	(1)	4118918
1857	13.5	16.3	1.3	chr9	94669130	94669594	(43725123)	+	MER61F	LTR/ERV1	5	540	(136)	4120058
1967	6.9	0.0	5.0	chr9	94669595	94669895	(43724822)	C	AluYf1	SINE/Alu	(0)	311	33	4120059
17	0.0	0.0	0.0	chr9	95907339	95907357	(42487360)	+	(T)n	Simple_repeat	1	19	(0)	4121948
961	14.4	0.0	0.0	chr9	95907373	95907504	(42487213)	C	AluSx	SINE/Alu	(180)	132	1	4121949
1939	8.1	0.0	15.1	chr9	96074475	96074819	(42319898)	C	AluSc	SINE/Alu	(16)	293	1	4122173
1722	13.8	1.4	4.9	chr9	97632382	97632685	(40762032)	C	AluJb	SINE/Alu	(19)	293	1	4124841
459	28.6	6.9	0.6	chr9	97632719	97632880	(40761837)	C	L2a	LINE/L2	(763)	2656	2484	4124835
308	28.4	11.8	9.7	chr9	97696884	97697140	(40697577)	C	L1M4b	LINE/L1	(6203)	664	402	4124935
465	21.8	12.2	2.9	chr9	97808881	97809050	(40585667)	+	MER113	DNA/hAT-Charlie	330	517	(4)	4125188
445	20.2	10.2	0.0	chr9	97809056	97809169	(40585548)	+	MIRb	SINE/MIR	14	140	(128)	4125189
2028	11.6	1.6	4.4	chr9	99257135	99257452	(39137265)	+	AluSz	SINE/Alu	1	309	(3)	4128099
332	30.7	4.8	1.4	chr9	99257580	99257721	(39136996)	+	MIR3	SINE/MIR	30	176	(32)	4128100
8347	20.0	3.5	2.2	chr9	105224038	105225821	(33168896)	C	L1M4b	LINE/L1	(5059)	1808	2	4137175
185	31.5	14.2	8.3	chr9	107294673	107295672	(31099045)	C	L2a	LINE/L2	(967)	2452	1384	4140369
1696	16.0	6.0	1.4	chr9	109296604	109296890	(29097827)	+	AluJr	SINE/Alu	1	301	(11)	4144195
493	32.9	5.0	1.9	chr9	109296917	109296929	(29097788)	+	MIRb	SINE/MIR	4	18	(250)	4144196
2034	13.8	1.0	12.3	chr9	109296930	109297367	(29097350)	+	MLT1B	LTR/ERVL-MaLR	1	388	(2)	4144197
306	25.7	9.5	3.2	chr9	109401284	109401440	(28993277)	C	MER5A	DNA/hAT-Charlie	(19)	170	3	4144430
20	24.2	2.5	3.7	chr9	110048556	110048634	(28346083)	+	G-rich	Low_complexity	1	81	(0)	4145581
1127	17.3	9.0	9.3	chr9	111240152	111240451	(27154266)	C	AluJo	SINE/Alu	(12)	300	2	4147531
3966	16.5	2.3	2.4	chr9	111481531	111482133	(26912584)	+	L1MB3	LINE/L1	5584	6183	(0)	4147929
436	25.7	6.5	0.7	chr9	111482339	111482483	(26912234)	+	MIRc	SINE/MIR	99	252	(16)	4147931
2730	32.2	10.5	9.3	chr9	111782435	111783697	(26611020)	+	L2a	LINE/L2	1121	2358	(1061)	4148518
2560	17.0	4.9	1.5	chr9	111783698	111784151	(26610566)	C	MER70A	LTR/ERVL	(0)	472	3	4148519
248	32.0	11.7	3.1	chr9	112299740	112299965	(26094752)	+	MLT1I	LTR/ERVL-MaLR	104	351	(60)	4149537
1245	24.7	9.9	3.0	chr9	112300017	112300470	(26094247)	+	L1ME3B	LINE/L1	5396	5888	(354)	4149536
39	2.7	0.0	0.0	chr9	112487937	112487974	(25906743)	+	(GT)n	Simple_repeat	1	38	(0)	4149958
2376	8.2	1.6	0.3	chr9	113363604	113363906	(25030811)	+	AluSz	SINE/Alu	6	312	(0)	4151521
1840	16.6	2.3	1.7	chr9	113363908	113364208	(25030509)	+	AluSz	SINE/Alu	2	304	(8)	4151522
297	31.7	9.1	1.5	chr9	113364209	113364400	(25030317)	C	L1ME3G	LINE/L1	(256)	668	459	4151523
342	37.0	8.7	1.4	chr9	113449045	113449332	(24945385)	C	L2	LINE/L2	(537)	2882	2572	4151699
319	31.1	6.3	0.7	chr9	113449488	113449636	(24945081)	+	MamRep137	DNA/TcMar-Tigger	59	216	(294)	4151700
307	28.8	0.0	1.2	chr9	113449643	113449723	(24944994)	+	MamRep137	DNA/TcMar-Tigger	419	498	(12)	4151701
2381	9.5	0.0	1.3	chr9	113449729	113450044	(24944673)	C	AluSx1	SINE/Alu	(0)	312	1	4151702
2267	31.6	10.3	8.9	chr9	114879358	114881389	(23513328)	C	L2c	LINE/L2	(1085)	2334	287	4154590
2197	12.6	0.7	0.0	chr9	122224016	122224324	(16170393)	C	AluSc8	SINE/Alu	(0)	311	1	4168582
17	0.0	0.0	0.0	chr9	122224487	122224505	(16170212)	+	(AC)n	Simple_repeat	1	19	(0)	4168583
24	26.0	1.4	1.4	chr9	122224698	122224773	(16169944)	+	(CA)n	Simple_repeat	1	76	(0)	4168584
2434	8.1	0.7	0.0	chr9	122828828	122829135	(15565582)	+	AluSx1	SINE/Alu	1	310	(2)	4169621
16	16.3	0.0	2.8	chr9	123266704	123266739	(15127978)	+	(CCA)n	Simple_repeat	1	36	(0)	4170355
304	18.3	10.9	12.9	chr9	123322375	123322506	(15072211)	+	MER94	DNA/hAT-Blackjack	3	131	(3)	4170495
2579	8.1	0.3	0.3	chr9	123707113	123707419	(14687298)	+	AluSp	SINE/Alu	1	307	(6)	4171176
3063	26.4	9.0	5.6	chr9	123707420	123708113	(14686604)	C	L2	LINE/L2	(1166)	2253	1518	4171173
2204	12.3	0.0	0.3	chr9	124431277	124431577	(13963140)	+	AluSx	SINE/Alu	1	300	(12)	4172557
848	29.8	10.8	7.3	chr9	124431591	124431847	(13962870)	C	ERVL-B4-int	LTR/ERVL	(2874)	2840	2427	4172554
2403	8.6	0.0	0.7	chr9	124431848	124432149	(13962568)	C	AluSx3	SINE/Alu	(11)	300	1	4172558
273	28.7	11.3	0.0	chr9	124480388	124480481	(13914236)	+	MER91A	DNA/hAT-Tip100	91	196	(0)	4172661
448	22.1	1.9	0.0	chr9	124480509	124480612	(13914105)	+	MIRc	SINE/MIR	37	142	(126)	4172662
210	25.0	24.5	0.0	chr9	124480856	124480935	(13913782)	+	MIRb	SINE/MIR	156	261	(7)	4172663
1094	12.8	0.0	0.6	chr9	124815516	124815671	(13579046)	+	AluJr	SINE/Alu	1	155	(157)	4173291
15	13.9	0.0	0.0	chr9	124815672	124815695	(13579022)	+	(A)n	Simple_repeat	1	24	(0)	4173292
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
17	8.2	0.0	0.0	chr9	124869371	124869396	(13525321)	+	(GGC)n	Simple_repeat	1	26	(0)	4173431
1546	30.6	7.2	3.5	chr9	125804976	125805825	(12588892)	C	L2a	LINE/L2	(90)	3336	2428	4175355
190	29.9	8.2	1.5	chr9	126153187	126153254	(12241463)	+	L3	LINE/CR1	3914	3986	(113)	4175944
162	22.3	0.3	1.1	chr9	126153363	126153725	(12240992)	+	(ATCC)n	Simple_repeat	1	364	(0)	4175945
412	31.7	2.1	2.1	chr9	126153726	126153870	(12240847)	C	L2a	LINE/L2	(0)	3426	3282	4175946
13007	16.6	1.9	5.1	chr9	126735631	126736674	(11658043)	+	L1M4	LINE/L1	1770	2869	(3775)	4176923
2101	12.3	0.0	3.5	chr9	126821092	126821408	(11573309)	+	AluSz	SINE/Alu	7	312	(0)	4177129
14950	12.1	3.8	3.0	chr9	126821409	126821759	(11572958)	+	Tigger1	DNA/TcMar-Tigger	1543	1903	(515)	4177126
1186	13.6	6.5	6.1	chr9	126821760	126821865	(11572852)	+	MER30	DNA/hAT-Charlie	2	96	(134)	4177130
2266	7.9	3.0	0.0	chr9	126821866	126822155	(11572562)	C	AluSq2	SINE/Alu	(14)	299	1	4177131
27	20.3	2.6	5.8	chr9	127916990	127917101	(10477616)	+	G-rich	Low_complexity	1	108	(0)	4179327
307	29.4	9.3	4.0	chr9	128948386	128948537	(9446180)	C	MIRb	SINE/MIR	(1)	267	107	4181713
330	19.2	1.5	1.6	chr9	129232556	129233270	(9161447)	+	(TCCA)n	Simple_repeat	1	726	(0)	4182382
466	30.7	3.6	6.6	chr9	129233275	129233501	(9161216)	C	L2c	LINE/L2	(5)	3382	3163	4182383
800	25.2	4.4	1.3	chr9	129395097	129397754	(8996963)	+	(GATG)n	Simple_repeat	1	2776	(0)	4182726
401	25.8	1.8	0.5	chr9	129456632	129457679	(8937038)	+	(ATGG)n	Simple_repeat	1	1067	(0)	4182874
1703	16.7	0.7	2.5	chr9	130018943	130019224	(8375493)	+	AluSx	SINE/Alu	1	277	(35)	4184126
779	7.5	0.0	0.0	chr9	130019225	130019318	(8375399)	+	AluSc	SINE/Alu	205	298	(11)	4184127
338	22.8	0.3	0.1	chr9	130356895	130357612	(8037105)	+	(TGGA)n	Simple_repeat	1	720	(0)	4184863
453	14.7	4.1	0.1	chr9	130454688	130455557	(7939160)	+	(ATCC)n	Simple_repeat	1	906	(0)	4185043
13	14.8	0.0	3.1	chr9	130835203	130835234	(7559483)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4185897
5215	7.4	5.1	2.9	chr9	132668868	132669498	(5725219)	C	MER4E1	LTR/ERV1	(131)	650	1	4189286
12	18.1	0.0	3.0	chr9	132669623	132669655	(5725062)	+	(CCACT)n	Simple_repeat	1	33	(0)	4189288
2447	5.8	0.7	0.0	chr9	133347238	133347531	(5047186)	+	AluSx1	SINE/Alu	3	298	(14)	4190449
2418	5.8	0.0	1.0	chr9	133392075	133392366	(5002351)	C	AluYc	SINE/Alu	(10)	289	1	4190504
538	26.8	0.3	0.3	chr9	133392397	133393699	(5001018)	+	G-rich	Low_complexity	1	1307	(0)	4190505
22	15.9	1.9	3.6	chr9	133933393	133933421	(4461296)	+	(GAAT)n	Simple_repeat	1	30	(0)	4191281
384	9.3	3.4	1.1	chr9	133933422	133934147	(4460570)	+	(ATGG)n	Simple_repeat	1	751	(0)	4191282
22	15.9	1.9	3.6	chr9	133934148	133934171	(4460546)	+	(GAAT)n	Simple_repeat	3	25	(0)	4191283
890	4.4	6.3	0.8	chr9	134103374	134104735	(4289982)	+	(ATCC)n	Simple_repeat	1	1448	(0)	4191565
2285	10.0	1.0	1.3	chr9	134104755	134105064	(4289653)	C	AluSc	SINE/Alu	(0)	309	1	4191566
83	33.2	0.4	0.4	chr9	134451726	134451831	(3942886)	+	(CCAT)n	Simple_repeat	1	106	(0)	4192030
208	8.0	3.1	3.0	chr9	134451832	134452244	(3942473)	+	(ATCC)n	Simple_repeat	1	426	(0)	4192031
83	33.2	0.4	0.4	chr9	134452245	134452404	(3942313)	+	(CCAT)n	Simple_repeat	3	162	(0)	4192032
24	16.6	3.7	0.0	chr9	134641876	134641939	(3752778)	+	GA-rich	Low_complexity	1	66	(0)	4192279
806	6.3	4.3	0.3	chr9	134684872	134686079	(3708638)	+	(ATCC)n	Simple_repeat	1	1260	(0)	4192336
265	22.2	3.1	0.0	chr9	134809586	134809648	(3585069)	C	MamRep434	DNA/TcMar-Tigger	(360)	66	2	4192436
419	14.4	4.5	0.3	chr9	135303896	135304715	(3090002)	+	(TGGA)n	Simple_repeat	1	857	(0)	4193021
870	32.2	7.8	0.7	chr9	135478124	135478539	(2916178)	+	L1M5	LINE/L1	5271	5718	(406)	4193295
195	34.4	7.0	0.0	chr9	135752514	135752606	(2642111)	+	L2b	LINE/L2	3276	3375	(0)	4193597
295	17.5	2.0	0.5	chr9	135752607	135753190	(2641527)	+	(GGAT)n	Simple_repeat	1	596	(0)	4193598
15	5.6	0.0	0.0	chr9	137070669	137070687	(1324030)	+	(T)n	Simple_repeat	1	19	(0)	4195188
13	5.3	0.0	0.0	chr9	137087114	137087133	(1307584)	+	(CCG)n	Simple_repeat	1	20	(0)	4195210
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
18	19.0	2.4	0.0	chr9	137516820	137516861	(877856)	+	(TAA)n	Simple_repeat	1	43	(0)	4195727
30	15.4	0.0	5.6	chr9	137590424	137590495	(804222)	+	(GCC)n	Simple_repeat	1	72	(0)	4195818
17	27.6	3.1	0.0	chr9	137590625	137590689	(804028)	+	G-rich	Low_complexity	1	67	(0)	4195819
15	4.0	3.6	3.5	chr9	137590919	137590946	(803771)	+	(GGGC)n	Simple_repeat	1	29	(0)	4195820
561	30.6	17.3	2.4	chr9	137689767	137690253	(704464)	C	L2a	LINE/L2	(290)	3136	2561	4196041
311	23.1	7.0	0.0	chr9	137690255	137690351	(704366)	C	L1ME3G	LINE/L1	(291)	633	540	4196042
922	18.4	1.8	0.0	chr9	137690364	137690526	(704191)	+	AluJr	SINE/Alu	137	302	(10)	4196043
6605	5.9	8.7	2.1	chrX	10588320	10589308	(145451587)	C	Harlequin-int	LTR/ERV1	(5555)	1341	282	4376702
274	14.0	0.0	3.9	chrX	10589310	10589361	(145451534)	C	Harlequin-int	LTR/ERV1	(7509)	304	255	4376702
694	14.2	0.0	4.0	chrX	10589350	10589474	(145451421)	C	HERVE_a-int	LTR/ERV1	(7465)	382	263	4376703
2790	8.1	0.3	0.0	chrX	10589470	10589852	(145451043)	C	HERVE_a-int	LTR/ERV1	(7463)	384	1	4376704
294	37.9	4.8	4.3	chrX	11657450	11657841	(144383054)	C	L2	LINE/L2	(834)	2585	2192	4378386
1233	16.0	2.3	0.5	chrX	13494330	13494543	(142546352)	C	MER20	DNA/hAT-Charlie	(0)	219	2	4381268
18	16.7	6.1	4.3	chrX	14030226	14030291	(142010604)	+	(CTTT)n	Simple_repeat	1	70	(0)	4382166
1559	27.5	5.7	3.0	chrX	15743000	15743519	(140297376)	+	L2a	LINE/L2	2875	3411	(15)	4384875
731	24.5	15.5	9.1	chrX	15743777	15744334	(140296561)	C	LTR86C	LTR/ERVL	(0)	621	22	4384882
12	21.4	2.1	4.2	chrX	16719564	16719610	(139321285)	+	(GCGGCG)n	Simple_repeat	1	48	(0)	4386549
326	36.8	5.2	6.8	chrX	21817164	21817656	(134223239)	C	L2b	LINE/L2	(0)	3387	2910	4394972
311	20.8	2.7	8.9	chrX	21817771	21817824	(134223071)	+	MLT1H2	LTR/ERVL-MaLR	57	110	(301)	4394973
2623	11.7	7.7	0.0	chrX	21817825	21818219	(134222676)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4394974
1341	25.2	1.4	10.2	chrX	22122654	22122984	(133917911)	C	MLT1H	LTR/ERVL-MaLR	(146)	403	103	4395532
12	13.1	2.7	5.3	chrX	22236255	22236291	(133804604)	+	(TTATCTT)n	Simple_repeat	1	38	(0)	4395726
193	23.6	25.4	0.9	chrX	24029869	24029975	(132010920)	C	L2a	LINE/L2	(183)	3243	3102	4398631
1304	23.3	15.3	0.5	chrX	24029967	24030154	(132010741)	C	L2a	LINE/L2	(488)	2931	2697	4398631
33	0.0	0.0	0.0	chrX	24030155	24030185	(132010710)	+	(AATGG)n	Simple_repeat	1	31	(0)	4398634
1304	23.3	15.3	0.5	chrX	24030186	24030385	(132010510)	C	L2a	LINE/L2	(723)	2696	2475	4398631
46332	10.4	1.8	0.5	chrX	25896369	25900469	(130140426)	+	HERVK22-int	LTR/ERVK	2496	6613	(224)	4401737
428	31.1	3.2	0.0	chrX	38524531	38524681	(117516214)	C	L4_A_Mam	LINE/RTE-X	(621)	4369	4214	4419110
1188	19.5	5.5	1.6	chrX	38524672	38525006	(117515889)	+	L1M5	LINE/L1	5300	5653	(509)	4419112
1984	23.2	5.0	2.1	chrX	39705184	39705667	(116335228)	+	MLT1G1	LTR/ERVL-MaLR	81	579	(0)	4421014
1221	21.1	0.0	0.0	chrX	39705722	39705944	(116334951)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	4421015
111	1.4	4.3	4.1	chrX	39733875	39734036	(116306859)	+	(GGAT)n	Simple_repeat	1	169	(0)	4421067
16	12.1	0.0	0.0	chrX	39734046	39734073	(116306822)	+	(TGGA)n	Simple_repeat	1	28	(0)	4421068
209	35.6	3.3	1.7	chrX	39734105	39734224	(116306671)	C	L3b	LINE/CR1	(172)	5060	4939	4421069
15	12.2	0.0	0.0	chrX	40151716	40151742	(115889153)	+	(GGC)n	Simple_repeat	1	27	(0)	4421857
10477	17.5	4.8	2.1	chrX	40971090	40972251	(115068644)	C	L1M4b	LINE/L1	(4804)	2063	843	4423402
1910	17.9	0.0	0.0	chrX	40972252	40972541	(115068354)	C	AluJb	SINE/Alu	(22)	290	1	4423403
5551	19.8	11.7	2.1	chrX	41107320	41109290	(114931605)	C	L1MB4	LINE/L1	(4679)	2188	11	4423687
17	6.1	2.5	7.3	chrX	41131324	41131363	(114909532)	+	(TTAATA)n	Simple_repeat	1	41	(0)	4423732
273	25.9	11.5	0.0	chrX	41131689	41131796	(114909099)	+	Charlie4z	DNA/hAT-Charlie	37	158	(9)	4423733
2613	3.7	0.3	0.0	chrX	41382097	41382395	(114658500)	+	AluY	SINE/Alu	2	301	(10)	4424256
535	21.7	4.0	7.1	chrX	41443053	41443206	(114597689)	+	MIR3	SINE/MIR	15	163	(45)	4424422
473	21.9	2.8	0.0	chrX	41491835	41491939	(114548956)	C	MLT1J	LTR/ERVL-MaLR	(1)	511	404	4424534
1177	15.0	12.5	0.0	chrX	41491940	41492163	(114548732)	+	L1MA8	LINE/L1	5839	6086	(205)	4424535
2321	10.2	0.0	0.6	chrX	41492164	41492476	(114548419)	+	AluSp	SINE/Alu	2	312	(1)	4424536
1087	17.5	0.0	4.1	chrX	44751899	44751924	(111288971)	+	AluJb	SINE/Alu	114	133	(179)	4429624
1537	15.7	10.0	3.1	chrX	44751925	44752211	(111288684)	+	AluJo	SINE/Alu	1	309	(3)	4429625
46	0.0	0.0	0.0	chrX	45187469	45187507	(110853388)	+	(CA)n	Simple_repeat	1	39	(0)	4430458
2065	13.8	0.0	0.0	chrX	46811497	46811794	(109229101)	C	AluJb	SINE/Alu	(3)	309	12	4432815
236	29.4	5.8	12.1	chrX	46811795	46811830	(109229065)	C	L1MD2	LINE/L1	(6464)	83	59	4432813
2031	29.5	8.9	0.5	chrX	46811914	46812835	(109228060)	+	L2a	LINE/L2	2232	3240	(186)	4432810
237	29.4	14.3	0.0	chrX	47191932	47192033	(108848862)	+	MIRb	SINE/MIR	43	161	(107)	4433580
983	21.8	3.5	0.1	chrX	47192031	47192254	(108848641)	C	MIR	SINE/MIR	(37)	231	1	4433581
430	31.6	5.4	0.7	chrX	47192282	47192421	(108848474)	C	MIRb	SINE/MIR	(1)	267	121	4433582
1925	15.0	0.3	1.4	chrX	47298046	47298338	(108742557)	C	AluJb	SINE/Alu	(18)	294	5	4433778
832	19.1	7.2	5.6	chrX	47298345	47298434	(108742461)	C	L1MD2	LINE/L1	(1594)	4552	4472	4433775
2514	6.4	0.0	0.3	chrX	47298435	47298732	(108742163)	C	AluSx	SINE/Alu	(15)	297	1	4433779
510	26.4	15.4	5.8	chrX	47366864	47367120	(108673775)	C	L1M5	LINE/L1	(2885)	3261	2976	4433981
2143	11.8	1.3	0.3	chrX	47367147	47367452	(108673443)	C	AluSz6	SINE/Alu	(3)	309	1	4433982
19	0.0	0.0	0.0	chrX	48911419	48911439	(107129456)	+	(CA)n	Simple_repeat	1	21	(0)	4437078
181	15.2	0.0	0.0	chrX	48971979	48972011	(107068884)	+	MIR3	SINE/MIR	115	147	(61)	4437196
19	25.4	5.3	0.0	chrX	54808161	54808235	(101232660)	+	(AGTAGGA)n	Simple_repeat	1	79	(0)	4446411
14	27.3	5.3	1.2	chrX	54808223	54808298	(101232597)	+	G-rich	Low_complexity	1	80	(0)	4446412
19	18.8	6.5	1.5	chrX	69504963	69505024	(86535871)	+	(CGC)n	Simple_repeat	1	66	(0)	4458297
48	5.6	0.0	0.0	chrX	72238944	72239000	(83801895)	+	(GGAGCTT)n	Simple_repeat	1	57	(0)	4462954
2446	8.1	0.0	0.7	chrX	72239489	72239795	(83801100)	+	AluSx3	SINE/Alu	1	305	(6)	4462955
21567	13.2	1.7	3.3	chrX	73476192	73482637	(82558258)	C	L1PA7	LINE/L1	(0)	6339	2	4464524
21205	10.8	1.3	1.0	chrX	73482637	73485388	(82555507)	+	L1PA8A	LINE/L1	1681	4446	(1885)	4464525
634	25.0	5.7	5.7	chrX	73564119	73564310	(82476585)	+	MIR3	SINE/MIR	3	190	(18)	4464584
4182	20.6	1.8	2.3	chrX	74120276	74120951	(81919944)	+	L1P4b	LINE/L1	1960	2629	(4689)	4465190
742	12.0	0.0	0.0	chrX	74178481	74178588	(81862307)	+	HERVK3-int	LTR/ERVK	586	693	(6144)	4465236
921	17.1	1.2	0.0	chrX	74178921	74179078	(81861817)	+	HERVK3-int	LTR/ERVK	2330	2489	(4348)	4465236
2171	12.0	0.0	0.7	chrX	76173222	76173522	(79867373)	C	AluJb	SINE/Alu	(13)	299	1	4467323
12791	21.0	6.1	2.5	chrX	80815221	80817757	(75223138)	+	L1M4b	LINE/L1	9	2668	(4199)	4472234
16	21.3	2.6	0.0	chrX	85243850	85243887	(70797008)	+	(GC)n	Simple_repeat	1	39	(0)	4476826
43	4.3	0.0	0.0	chrX	85244124	85244171	(70796724)	+	(GGC)n	Simple_repeat	1	48	(0)	4476827
22	37.1	1.5	1.4	chrX	93673381	93673517	(62367378)	+	(GGCGGA)n	Simple_repeat	1	139	(0)	4485919
3510	12.6	2.3	3.0	chrX	97389641	97390205	(58650690)	C	LTR26	LTR/ERV1	(0)	603	43	4490640
816	36.6	9.3	1.6	chrX	100582854	100583420	(55457475)	C	L2c	LINE/L2	(475)	2944	2330	4494512
190	26.1	12.7	0.0	chrX	100583532	100583600	(55457295)	C	L2	LINE/L2	(798)	2621	2543	4494513
582	34.2	7.3	4.7	chrX	100583643	100583678	(55457217)	C	L2	LINE/L2	(866)	2553	2523	4494513
225	30.3	11.2	1.1	chrX	101270573	101270749	(54770146)	+	L2c	LINE/L2	2435	2631	(788)	4495724
313	24.3	2.8	0.0	chrX	101390468	101390537	(54650358)	+	L2a	LINE/L2	3350	3421	(5)	4495960
669	25.8	8.5	0.6	chrX	103152360	103152522	(52888373)	+	AluJb	SINE/Alu	135	311	(1)	4498146
152	8.3	0.8	3.9	chrX	103152523	103152775	(52888120)	+	(GAAA)n	Simple_repeat	1	255	(0)	4498147
54	0.0	0.0	0.0	chrX	103463953	103463998	(52576897)	+	(GT)n	Simple_repeat	1	46	(0)	4498652
4944	15.3	4.7	0.8	chrX	103931642	103932470	(52108425)	+	MER21B	LTR/ERVL	1	862	(6)	4499353
520	33.3	13.0	1.3	chrX	104135064	104135753	(51905142)	+	L2c	LINE/L2	2091	2873	(546)	4499608
311	34.5	5.2	5.2	chrX	104135780	104135953	(51904942)	C	L2c	LINE/L2	(24)	3363	3190	4499609
2095	30.1	11.6	0.8	chrX	107704012	107705111	(48335784)	C	L2a	LINE/L2	(18)	3408	2170	4504683
201	26.3	27.3	1.3	chrX	107893673	107893826	(48147069)	+	MIRc	SINE/MIR	2	210	(58)	4505003
265	28.4	7.8	4.0	chrX	107893874	107893972	(48146923)	C	L2c	LINE/L2	(1)	3386	3284	4505004
421	26.1	12.5	11.8	chrX	107894001	107894258	(48146637)	+	L2c	LINE/L2	3117	3361	(14)	4505005
44358	6.7	0.9	0.2	chrX	108477842	108483159	(47557736)	C	HERVL-int	LTR/ERVL	(296)	5358	1	4505880
9363	5.8	0.2	0.2	chrX	112208915	112210123	(43830772)	C	HERVL-int	LTR/ERVL	(1412)	4242	3034	4511084
325	8.7	0.0	0.0	chrX	112210133	112210178	(43830717)	C	MLT2A2	LTR/ERVL	(405)	48	3	4511085
837	27.6	0.5	3.1	chrX	112210228	112210455	(43830440)	+	MIR	SINE/MIR	7	228	(34)	4511086
8248	5.9	1.1	1.6	chrX	115543456	115544609	(40496286)	C	Harlequin-int	LTR/ERV1	(5485)	1411	263	4515716
1304	9.9	0.5	0.0	chrX	115544610	115544810	(40496085)	C	Harlequin-int	LTR/ERV1	(6432)	464	263	4515718
1803	14.2	14.7	1.9	chrX	116639332	116639703	(39401192)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4516886
5443	15.8	0.2	0.1	chrX	116639704	116640557	(39400338)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	777	4516886
275	28.3	11.8	0.0	chrX	119646947	119647066	(36393829)	C	Chap1_Mam	DNA/hAT-Charlie	(10)	332	197	4521494
2362	9.1	0.0	0.0	chrX	119887382	119887677	(36153218)	+	AluSz	SINE/Alu	1	296	(16)	4522065
1117	10.0	1.3	0.0	chrX	119887931	119888080	(36152815)	C	AluJb	SINE/Alu	(34)	278	127	4522066
30	16.0	0.0	0.0	chrX	120373890	120373945	(35666950)	+	(CCT)n	Simple_repeat	1	56	(0)	4522834
1023	13.7	0.0	0.0	chrX	120374022	120374167	(35666728)	C	LTR8	LTR/ERV1	(0)	691	546	4522835
1358	11.0	0.0	4.3	chrX	120374168	120374376	(35666519)	C	HUERS-P1-int	LTR/ERV1	(6063)	200	1	4522836
11	30.8	1.5	4.4	chrX	120561438	120561504	(35479391)	+	G-rich	Low_complexity	1	68	(0)	4523169
18	25.3	1.6	9.4	chrX	120561550	120561674	(35479221)	+	GA-rich	Low_complexity	1	127	(0)	4523170
38	0.0	0.0	0.0	chrX	123765232	123765266	(32275629)	+	(CCG)n	Simple_repeat	1	35	(0)	4527273
830	19.2	10.2	12.1	chrX	123765705	123765836	(32275059)	C	MER33	DNA/hAT-Charlie	(0)	324	210	4527274
357	24.1	8.5	0.0	chrX	123803310	123803417	(32237478)	C	L1ME3C	LINE/L1	(11)	6112	5995	4527378
2206	11.9	0.0	0.0	chrX	123803949	123804242	(32236653)	+	AluSz	SINE/Alu	1	294	(18)	4527379
22	20.1	4.2	2.7	chrX	129982405	129982476	(26058419)	+	(CTCC)n	Simple_repeat	1	75	(0)	4535724
17	4.9	0.0	0.0	chrX	129982601	129982621	(26058274)	+	(CA)n	Simple_repeat	1	21	(0)	4535725
35343	13.5	3.3	3.1	chrX	134093895	134097892	(21943003)	+	ERVL-int	LTR/ERVL	931	4971	(786)	4542075
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
1936	14.0	1.8	8.4	chrX	134720528	134720701	(21320194)	+	L1MB7	LINE/L1	5004	5167	(979)	4543247
1516	19.1	0.0	0.8	chrX	134720702	134720952	(21319943)	C	AluJb	SINE/Alu	(58)	254	6	4543249
4883	14.1	2.3	7.2	chrX	134720953	134721290	(21319605)	+	L1MB7	LINE/L1	5168	5484	(700)	4543247
14	23.5	0.0	7.8	chrX	134915322	134915385	(21125510)	+	G-rich	Low_complexity	1	64	(0)	4543615
366	34.2	3.4	6.2	chrX	134915534	134915841	(21125054)	+	L2b	LINE/L2	2555	2853	(566)	4543616
27	6.6	0.0	7.3	chrX	135098746	135098800	(20942095)	+	(CCGCC)n	Simple_repeat	1	55	(0)	4543936
322	23.9	0.0	1.4	chrX	135528537	135528608	(20512287)	+	MER3	DNA/hAT-Charlie	42	112	(97)	4544501
408	14.6	12.8	1.5	chrX	135528637	135528768	(20512127)	+	MER33	DNA/hAT-Charlie	175	323	(1)	4544502
1868	16.7	7.8	1.6	chrX	136162832	136163202	(19877693)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	1	4545537
182	21.3	15.3	0.0	chrX	136163203	136163263	(19877632)	+	MER5B	DNA/hAT-Charlie	107	178	(0)	4545538
1941	11.8	1.0	6.0	chrX	136916493	136916807	(19124088)	+	AluSx3	SINE/Alu	1	299	(12)	4546868
95	29.7	1.4	1.0	chrX	136916877	136917163	(19123732)	+	(CTCCTT)n	Simple_repeat	1	291	(0)	4546869
19	3.3	3.0	2.9	chrX	138177276	138177308	(17863587)	+	(ATTGG)n	Simple_repeat	1	34	(0)	4548937
42903	6.0	1.4	0.4	chrX	139398176	139402644	(16638251)	+	HERVL-int	LTR/ERVL	1184	5654	(0)	4550644
19755	7.3	1.3	1.5	chrX	139852482	139857325	(16183570)	+	HERVIP10FH-int	LTR/ERV1	157	7733	(4)	4551259
2879	9.3	2.8	1.5	chrX	139857329	139857785	(16183110)	+	LTR10F	LTR/ERV1	1	463	(48)	4551259
311	30.9	0.0	0.0	chrX	139857801	139857881	(16183014)	+	MSTD-int	LTR/ERVL-MaLR	1655	1735	(0)	4551255
12	18.3	5.4	0.0	chrX	140764845	140764881	(15276014)	+	(GGCTCCC)n	Simple_repeat	1	39	(0)	4552758
562	23.6	2.4	0.6	chrX	140764940	140765105	(15275790)	+	MER96B	DNA/hAT-Tip100	13	181	(236)	4552759
517	32.4	10.3	2.1	chrX	141415444	141415629	(14625266)	+	L1MB5	LINE/L1	387	589	(6278)	4553731
4726	22.5	7.7	5.3	chrX	141415652	141417160	(14623735)	+	L1MB5	LINE/L1	674	2221	(4646)	4553731
1127	19.5	7.8	2.3	chrX	144214614	144215050	(11825845)	+	L1M4	LINE/L1	2306	2847	(3797)	4557612
2227	8.3	7.4	1.7	chrX	144215051	144215407	(11825488)	+	MLT2A1	LTR/ERVL	1	379	(65)	4557613
355	19.4	6.3	1.8	chrX	149534909	149535961	(6504934)	+	(TCC)n	Simple_repeat	1	1119	(0)	4564758
15	19.4	0.0	4.4	chrX	149540682	149540726	(6500169)	+	(CCCTTC)n	Simple_repeat	1	45	(0)	4564765
1943	19.5	2.1	0.3	chrX	150031477	150031852	(6009043)	+	L1MD3	LINE/L1	7416	7798	(197)	4565325
1522	17.0	9.0	1.2	chrX	150031850	150032188	(6008707)	+	L1MC4a	LINE/L1	7504	7871	(11)	4565326
293	18.8	0.0	0.0	chrX	150032198	150032245	(6008650)	C	MER5B	DNA/hAT-Charlie	(130)	48	1	4565327
4304	18.5	3.5	3.6	chrX	150837548	150838530	(5202365)	+	L1MC3	LINE/L1	6889	7872	(10)	4566534
290	3.8	5.3	0.9	chrX	152911626	152912036	(3128859)	+	(CCCAT)n	Simple_repeat	1	433	(0)	4569586
18	16.1	7.0	1.6	chrX	153642231	153642287	(2398608)	+	(GAGGTGG)n	Simple_repeat	1	61	(0)	4570523
26	23.5	1.3	2.5	chrX	153642358	153642435	(2398460)	+	(GGC)n	Simple_repeat	1	79	(0)	4570524
459	23.8	13.3	1.1	chrX	154064195	154064470	(1976425)	+	L2	LINE/L2	1662	1976	(1443)	4571178
19	24.3	1.7	1.6	chrX	154490668	154490727	(1550168)	+	(GCCCC)n	Simple_repeat	1	61	(0)	4571927
337	23.6	0.0	0.0	chrY	10632251	10632322	(46595093)	C	AluJo	SINE/Alu	(16)	296	225	4587848
282	23.3	1.1	0.7	chrY	10632322	10632659	(46594756)	+	(CATTC)n	Satellite	1	340	(0)	4587849
70	19.4	0.7	0.0	chrY	10645834	10645975	(46581440)	+	(TCCAC)n	Simple_repeat	1	143	(0)	4587858
250	29.7	0.0	0.0	chrY	10645977	10646040	(46581375)	C	AluYh9	SINE/Alu	(24)	287	224	4587859
311	23.9	1.5	0.0	chrY	10646553	10646619	(46580796)	C	AluJo	SINE/Alu	(20)	292	225	4587861
872	21.1	0.7	0.5	chrY	10646619	10646825	(46580590)	+	(CCATT)n	Simple_repeat	2	210	(0)	4587862
400	17.2	3.0	0.0	chrY	10646833	10646896	(46580519)	C	AluYj4	SINE/Alu	(22)	289	224	4587863
872	21.1	0.7	0.5	chrY	10647446	10648190	(46579225)	+	(CCATT)n	Simple_repeat	2	745	(0)	4587866
338	21.8	0.0	0.0	chrY	10652290	10652344	(46575071)	C	AluYj4	SINE/Alu	(33)	278	224	4587882
308	18.4	0.0	0.0	chrY	10652497	10652545	(46574870)	C	AluYa8	SINE/Alu	(39)	271	223	4587883
292	25.4	1.5	0.0	chrY	10654283	10654349	(46573066)	C	AluYj4	SINE/Alu	(20)	291	224	4587887
334	19.6	0.0	0.0	chrY	10654633	10654688	(46572727)	C	AluSz6	SINE/Alu	(32)	280	225	4587888
411	19.1	2.9	0.0	chrY	10655330	10655397	(46572018)	C	AluYj4	SINE/Alu	(18)	293	224	4587890
145	6.1	0.0	0.0	chrY	10657258	10657428	(46569987)	+	(TCCAT)n	Simple_repeat	1	171	(0)	4587897
319	22.2	3.1	0.0	chrY	10660021	10660083	(46567332)	C	AluJo	SINE/Alu	(13)	299	235	4587910
268	25.0	3.0	0.0	chrY	10661398	10661461	(46565954)	C	AluYh9	SINE/Alu	(22)	289	224	4587917
275	20.9	4.3	0.0	chrY	10664501	10664567	(46562848)	C	Alu	SINE/Alu	(8)	293	224	4587924
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
511	25.4	0.8	0.6	chrY	10670765	10671084	(46556331)	+	(CCATT)n	Simple_repeat	1	320	(0)	4587944
254	28.6	0.0	0.0	chrY	10671654	10671709	(46555706)	C	AluYj4	SINE/Alu	(32)	279	224	4587946
511	25.4	0.8	0.6	chrY	10671709	10671898	(46555517)	+	(CCATT)n	Simple_repeat	2	193	(0)	4587947
355	22.1	1.4	0.0	chrY	10671899	10671966	(46555449)	C	AluYh9	SINE/Alu	(19)	292	224	4587948
511	25.4	0.8	0.6	chrY	10671966	10672627	(46554788)	+	(CCATT)n	Simple_repeat	2	665	(0)	4587949
511	25.4	0.8	0.6	chrY	10672714	10672929	(46554486)	+	(CCATT)n	Simple_repeat	1	215	(0)	4587951
31	28.2	0.0	0.0	chrY	10673697	10673783	(46553632)	+	(CCATT)n	Simple_repeat	1	87	(0)	4587962
135	9.1	0.0	0.0	chrY	10673793	10673981	(46553434)	+	(CATTC)n	Simple_repeat	1	189	(0)	4587963
47	20.7	0.9	0.9	chrY	10677123	10677230	(46550185)	+	(CCACT)n	Simple_repeat	1	109	(0)	4587969
331	24.7	1.4	0.0	chrY	10677231	10677303	(46550112)	C	AluYj4	SINE/Alu	(14)	297	224	4587970
161	20.0	0.9	0.3	chrY	10677304	10677635	(46549780)	+	(ATTCC)n	Simple_repeat	1	335	(0)	4587971
333	25.6	2.5	0.0	chrY	10677927	10678004	(46549411)	C	AluSz6	SINE/Alu	(8)	304	225	4587975
133	21.1	0.0	0.0	chrY	10678018	10678288	(46549127)	+	(ATTCC)n	Simple_repeat	1	271	(0)	4587976
372	21.9	1.4	0.0	chrY	10678453	10678525	(46548890)	C	AluYj4	SINE/Alu	(14)	297	224	4587980
83	9.2	1.9	1.9	chrY	10678539	10678694	(46548721)	+	(ATTCC)n	Simple_repeat	1	159	(0)	4587981
251	27.9	2.9	0.0	chrY	10678699	10678766	(46548649)	C	AluYj4	SINE/Alu	(17)	294	225	4587982
328	20.6	3.1	0.0	chrY	10686758	10686820	(46540595)	C	FRAM	SINE/Alu	(13)	153	89	4587996
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
38	8.2	0.0	0.0	chrY	10688496	10688548	(46538867)	+	(CCATT)n	Simple_repeat	1	53	(0)	4588002
281	26.8	0.0	0.0	chrY	10691962	10692017	(46535398)	C	AluYj4	SINE/Alu	(32)	279	224	4588013
88	20.4	0.0	0.0	chrY	10692030	10692206	(46535209)	+	(CATTC)n	Simple_repeat	1	177	(0)	4588014
370	20.6	1.4	0.0	chrY	10692207	10692274	(46535141)	C	AluYh9	SINE/Alu	(19)	292	224	4588015
307	23.7	0.1	0.1	chrY	10692286	10692970	(46534445)	+	(CCATT)n	Simple_repeat	1	686	(0)	4588016
322	25.1	3.0	0.5	chrY	10693618	10693705	(46533710)	C	AluY	SINE/Alu	(7)	295	207	4588025
222	19.6	0.7	0.7	chrY	10693706	10694157	(46533258)	+	(TTCCA)n	Simple_repeat	1	455	(0)	4588026
644	21.4	0.5	0.3	chrY	10921768	10922484	(46304931)	+	(TCCAT)n	Simple_repeat	2	718	(0)	4588446
125	14.9	0.5	0.5	chrY	10923567	10923784	(46303631)	+	(TCCAC)n	Simple_repeat	1	219	(0)	4588447
6112	24.5	0.6	0.4	chrY	10924055	10924868	(46302547)	+	(TTCCA)n	Simple_repeat	1	805	(0)	4588451
304	25.0	0.0	0.0	chrY	10925199	10925266	(46302149)	C	FRAM	SINE/Alu	(10)	156	89	4588454
6112	24.5	0.6	0.4	chrY	10925266	10926566	(46300849)	+	(TTCCA)n	Simple_repeat	4	1309	(0)	4588455
6112	24.5	0.6	0.4	chrY	10926630	10928410	(46299005)	+	(TTCCA)n	Simple_repeat	4	1791	(0)	4588457
6112	24.5	0.6	0.4	chrY	10929956	10930437	(46296978)	+	(TTCCA)n	Simple_repeat	1	482	(0)	4588461
6112	24.5	0.6	0.4	chrY	10930536	10932066	(46295349)	+	(TTCCA)n	Simple_repeat	4	1537	(0)	4588463
6112	24.5	0.6	0.4	chrY	10934815	10935643	(46291772)	+	(TTCCA)n	Simple_repeat	4	835	(0)	4588473
6112	24.5	0.6	0.4	chrY	10935711	10937015	(46290400)	+	(TTCCA)n	Simple_repeat	4	1312	(0)	4588475
6112	24.5	0.6	0.4	chrY	10937365	10938058	(46289357)	+	(TTCCA)n	Simple_repeat	5	697	(0)	4588479
6112	24.5	0.6	0.4	chrY	10938865	10939092	(46288323)	+	(TTCCA)n	Simple_repeat	1	230	(0)	4588485
274	24.6	1.4	0.0	chrY	10939093	10939161	(46288254)	C	FRAM	SINE/Alu	(14)	162	93	4588486
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
6112	24.5	0.6	0.4	chrY	10940668	10941242	(46286173)	+	(TTCCA)n	Simple_repeat	5	580	(0)	4588489
6112	24.5	0.6	0.4	chrY	10942264	10945531	(46281884)	+	(TTCCA)n	Simple_repeat	1	3273	(0)	4588495
4917	25.0	0.5	0.3	chrY	10945942	10948880	(46278535)	+	(TCCAC)n	Simple_repeat	1	2949	(0)	4588499
4917	25.0	0.5	0.3	chrY	10948985	10949839	(46277576)	+	(TCCAC)n	Simple_repeat	5	859	(0)	4588500
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
4917	25.0	0.5	0.3	chrY	10953151	10955597	(46271818)	+	(TCCAC)n	Simple_repeat	5	2454	(0)	4588512
1259	23.0	0.4	0.6	chrY	10958112	10958399	(46269016)	+	(CATTC)n	Satellite	4	291	(0)	4588519
301	17.0	0.0	0.0	chrY	10958417	10958463	(46268952)	C	AluYj4	SINE/Alu	(41)	270	224	4588520
226	15.8	0.0	5.0	chrY	10958430	10958469	(46268946)	+	SVA_F	Retroposon/SVA	332	369	(1006)	4588521
1259	23.0	0.4	0.6	chrY	10958474	10959925	(46267490)	+	(CATTC)n	Satellite	1	1451	(0)	4588522
1259	23.0	0.4	0.6	chrY	10960982	10961612	(46265803)	+	(CATTC)n	Satellite	2	631	(0)	4588527
754	24.9	0.3	0.6	chrY	10962541	10963548	(46263867)	+	(TTCCA)n	Simple_repeat	2	1010	(0)	4588528
754	24.9	0.3	0.6	chrY	10964510	10964872	(46262543)	+	(TTCCA)n	Simple_repeat	4	364	(0)	4588537
293	21.8	0.0	0.0	chrY	10964882	10964936	(46262479)	C	AluYj4	SINE/Alu	(33)	278	224	4588538
89	8.8	0.7	0.7	chrY	10971873	10972008	(46255407)	+	(ATTCC)n	Simple_repeat	1	137	(0)	4588558
29	5.7	0.0	0.0	chrY	10972147	10972183	(46255232)	+	(TCCAC)n	Simple_repeat	1	37	(0)	4588559
43	7.2	0.0	0.0	chrY	10973214	10973271	(46254144)	+	(CCATT)n	Simple_repeat	1	58	(0)	4588563
258	28.4	0.0	0.0	chrY	10974044	10974110	(46253305)	C	AluJb	SINE/Alu	(11)	291	225	4588566
332	22.4	2.9	0.0	chrY	10975858	10975924	(46251491)	C	AluYh9	SINE/Alu	(18)	293	225	4588573
306	20.3	3.0	0.0	chrY	10986737	10986800	(46240615)	C	AluYj4	SINE/Alu	(22)	289	224	4588603
371	24.0	2.8	0.0	chrY	10988388	10988478	(46238937)	C	AluSx	SINE/Alu	(13)	289	188	4588607
227	28.1	3.0	0.0	chrY	10988896	10988959	(46238456)	C	AluYj4	SINE/Alu	(22)	289	224	4588608
314	25.0	2.9	0.0	chrY	10994005	10994072	(46233343)	C	AluYa8	SINE/Alu	(18)	292	223	4588621
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
243	27.3	0.0	6.6	chrY	10995843	10995875	(46231540)	+	SVA_A	Retroposon/SVA	12	110	(1277)	4588626
323	26.0	0.0	0.0	chrY	10995876	10995948	(46231467)	C	AluYj4	SINE/Alu	(15)	296	224	4588627
257	20.8	0.4	0.4	chrY	10998948	10999009	(46228406)	+	SVA_B	Retroposon/SVA	315	376	(1008)	4588635
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
112	19.0	0.0	0.0	chrY	11001897	11002109	(46225306)	+	(CCATT)n	Simple_repeat	1	213	(0)	4588652
370	20.6	2.7	0.0	chrY	11002110	11002182	(46225233)	C	AluYj4	SINE/Alu	(13)	298	224	4588653
109	29.4	1.1	1.6	chrY	11003455	11003819	(46223596)	+	(CCATT)n	Simple_repeat	1	369	(0)	4588659
374	28.2	0.0	1.2	chrY	11003820	11003905	(46223510)	C	AluJb	SINE/Alu	(10)	292	208	4588660
239	28.1	1.5	0.0	chrY	11005075	11005138	(46222277)	C	AluYj4	SINE/Alu	(23)	288	224	4588664
296	27.5	0.0	0.0	chrY	11005579	11005647	(46221768)	C	AluYa8	SINE/Alu	(19)	291	223	4588665
259	17.8	0.0	4.3	chrY	11006543	11006589	(46220826)	+	SVA_C	Retroposon/SVA	336	380	(1004)	4588670
279	27.9	2.3	1.2	chrY	11009624	11009709	(46217706)	C	AluSz6	SINE/Alu	(18)	294	208	4588676
93	9.6	0.7	0.0	chrY	11009726	11009869	(46217546)	+	(TTCCA)n	Simple_repeat	1	145	(0)	4588677
240	25.4	0.0	0.0	chrY	11010798	11010852	(46216563)	C	AluJr	SINE/Alu	(33)	279	225	4588679
83	21.8	2.1	0.0	chrY	11013350	11013543	(46213872)	+	(CCATT)n	Simple_repeat	1	198	(0)	4588693
200	27.9	0.8	1.5	chrY	11013612	11014206	(46213209)	+	(ATTCC)n	Simple_repeat	1	600	(0)	4588695
182	25.7	0.2	0.5	chrY	11016108	11016482	(46210933)	+	(CCATT)n	Simple_repeat	3	377	(0)	4588710
294	21.8	0.0	0.0	chrY	11024506	11024560	(46202855)	C	AluYj4	SINE/Alu	(33)	278	224	4588731
347	19.1	2.9	0.0	chrY	11025300	11025367	(46202048)	C	AluYj4	SINE/Alu	(18)	293	224	4588733
316	21.8	0.0	0.0	chrY	11026128	11026182	(46201233)	C	AluYj4	SINE/Alu	(33)	278	224	4588734
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
261	25.4	4.3	0.0	chrY	11035454	11035520	(46191895)	C	AluJb	SINE/Alu	(7)	295	226	4588757
100	10.5	0.0	0.0	chrY	11037045	11037199	(46190216)	+	(CTCCA)n	Simple_repeat	1	155	(0)	4588760
257	21.2	7.0	2.9	chrY	11037201	11037212	(46190203)	+	SVA_B	Retroposon/SVA	46	116	(1267)	4588761
329	19.6	0.0	0.0	chrY	11037213	11037268	(46190147)	C	AluYj4	SINE/Alu	(33)	278	223	4588762
274	26.9	0.0	0.0	chrY	11038484	11038550	(46188865)	C	AluYj4	SINE/Alu	(20)	291	225	4588768
321	23.5	2.9	0.0	chrY	11039221	11039288	(46188127)	C	AluSz6	SINE/Alu	(18)	294	225	4588770
32	11.5	0.0	0.0	chrY	11040302	11040358	(46187057)	+	(CATTC)n	Simple_repeat	1	57	(0)	4588775
111	22.1	0.4	0.4	chrY	11040359	11040603	(46186812)	+	(CTCCA)n	Simple_repeat	1	246	(0)	4588776
36	2.7	0.0	0.0	chrY	11040620	11040657	(46186758)	+	(TTCCA)n	Simple_repeat	1	38	(0)	4588777
287	25.0	3.0	0.0	chrY	11040658	11040721	(46186694)	C	FRAM	SINE/Alu	(12)	154	89	4588757
64	18.5	0.0	0.0	chrY	11040733	11040855	(46186560)	+	(CCATT)n	Simple_repeat	1	123	(0)	4588778
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159
33	10.4	1.6	0.0	chrY	26653493	26653554	(30573861)	+	(AATCAAATGG)n	Simple_repeat	1	63	(0)	4607162
10957	28.2	0.5	0.1	chrY	26653555	26653806	(30573609)	+	(AATGG)n	Simple_repeat	1	254	(0)	4607163
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165
10957	28.2	0.5	0.1	chrY	26663782	26667999	(30559416)	+	(AATGG)n	Simple_repeat	2	4237	(0)	4607171
2520	29.1	0.4	0.0	chrY	26666000	26668371	(30559044)	+	(ATGGA)n	Simple_repeat	1	2380	(0)	4607172
2520	29.1	0.4	0.0	chrY	26668441	26670861	(30556554)	+	(ATGGA)n	Simple_repeat	1	2429	(0)	4607174
27	4.6	4.3	2.0	chrY	26670862	26670908	(30556507)	+	(AATCGAATGG)n	Simple_repeat	1	49	(0)	4607175
2520	29.1	0.4	0.0	chrY	26670909	26671489	(30555926)	+	(ATGGA)n	Simple_repeat	5	589	(0)	4607176