403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
1638	25.9	5.5	4.8	chr1	174135243	174135744	(74820678)	+	L2c	LINE/L2	2035	2540	(879)	256769
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
2315	10.7	1.3	0.0	chr1	225926240	225926547	(23029875)	C	AluSx	SINE/Alu	(0)	312	1	334824
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
12	14.7	3.3	0.0	chr1	235977736	235977765	(12978657)	+	G-rich	Low_complexity	1	31	(0)	350753
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
241	27.5	11.8	6.6	chr10	15591669	15591820	(118205602)	+	MamTip2	DNA/hAT-Tip100	1	161	(144)	394524
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
1396	35.0	4.0	2.7	chr11	1364024	1364808	(133721814)	C	ERVL-E-int	LTR/ERVL	(4871)	796	1	574528
25	21.4	0.0	0.0	chr11	36309951	36310005	(98776617)	+	(CCA)n	Simple_repeat	1	55	(0)	628227
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
83	17.8	0.0	1.2	chr11	133354200	133354359	(1732263)	+	(TGG)n	Simple_repeat	1	160	(0)	775811
365	26.6	15.9	0.0	chr11	133354418	133354560	(1732062)	C	MIR	SINE/MIR	(78)	184	15	775812
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
640	34.7	3.6	6.0	chr12	1854996	1855289	(131420020)	+	L2a	LINE/L2	3135	3426	(0)	781354
225	24.2	1.5	1.5	chr12	1855447	1855513	(131419796)	+	MLT1C	LTR/ERVL-MaLR	203	269	(198)	781356
210	30.8	7.0	0.8	chr12	1855566	1855686	(131419623)	C	MIR3	SINE/MIR	(14)	194	66	781357
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
331	31.5	12.2	1.4	chr12	12735311	12735631	(120539678)	C	L2c	LINE/L2	(179)	3208	2842	798663
1208	20.5	6.8	6.5	chr12	12735645	12735775	(120539534)	+	AluJr4	SINE/Alu	4	119	(193)	798664
26	0.0	0.0	0.0	chr12	12735776	12735800	(120539509)	+	(AATA)n	Simple_repeat	1	25	(0)	798665
1208	20.5	6.8	6.5	chr12	12735801	12735961	(120539348)	+	AluJr4	SINE/Alu	137	297	(15)	798664
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
2327	9.1	0.0	0.0	chr12	122045101	122045387	(11229922)	+	AluSz	SINE/Alu	3	289	(23)	970978
18	19.6	0.0	0.0	chr12	122045550	122045584	(11229725)	+	(TG)n	Simple_repeat	1	35	(0)	970979
345	31.4	14.1	0.5	chr12	122045604	122045806	(11229503)	C	L1MC4	LINE/L1	(2)	8040	7807	970980
1776	14.4	8.9	0.0	chr12	122045807	122046083	(11229226)	+	AluJb	SINE/Alu	1	304	(8)	970981
552	33.0	13.5	4.2	chr12	124252386	124252881	(9022428)	C	Tigger18a	DNA/TcMar-Tigger	(43)	809	244	975763
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
381	21.5	0.0	0.0	chr15	66270142	66270220	(35720969)	+	MER135	DNA	43	121	(107)	1334318
2109	11.3	3.2	2.6	chr15	66270322	66270631	(35720558)	+	AluSz	SINE/Alu	1	312	(0)	1334319
1954	9.8	7.1	0.0	chr15	69462458	69462732	(32528457)	C	AluSp	SINE/Alu	(17)	296	1	1340266
229	19.3	5.0	0.0	chr15	69587937	69587993	(32403196)	C	MIRc	SINE/MIR	(194)	74	15	1340534
633	30.4	9.2	9.0	chr15	69587971	69588158	(32403031)	+	L2b	LINE/L2	3011	3211	(176)	1340535
777	28.5	16.9	5.8	chr15	69588159	69588608	(32402581)	+	MLT1J	LTR/ERVL-MaLR	1	510	(2)	1340536
185	35.2	3.3	3.3	chr15	77699788	77699878	(24291311)	+	L2c	LINE/L2	3293	3383	(4)	1354494
1885	26.1	5.4	1.3	chr15	100457196	100457866	(1533323)	C	L1ME1	LINE/L1	(29)	6150	5486	1391472
608	20.0	0.9	0.0	chr16	995040	995149	(89343196)	+	MER81	DNA/hAT-Blackjack	1	111	(3)	1395391
207	27.3	0.4	1.5	chr16	995331	995395	(89342950)	+	L2c	LINE/L2	3341	3426	(0)	1395392
17	4.3	0.0	0.0	chr16	995399	995422	(89342923)	+	(TGAA)n	Simple_repeat	1	24	(0)	1395393
464	31.2	4.2	0.5	chr16	1025755	1025960	(89312385)	C	MER2	DNA/TcMar-Tigger	(130)	215	2	1395420
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
325	21.3	3.2	0.0	chr16	34071217	34071277	(56267068)	+	AluYa8	SINE/Alu	225	287	(23)	1463577
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
2519	14.9	3.4	3.2	chr17	17605682	17606215	(65651226)	C	L1MB7	LINE/L1	(357)	5827	5293	1576951
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26939888	26940398	(56317043)	+	(GAATG)n	Satellite	3	514	(0)	1585998
543	30.7	9.0	5.6	chr17	45928207	45928547	(37328894)	+	L2b	LINE/L2	2966	3319	(56)	1623056
482	20.6	3.6	0.0	chr17	45928557	45928663	(37328778)	+	MER5B	DNA/hAT-Charlie	13	123	(55)	1623057
2413	9.3	0.0	1.3	chr17	45928687	45928998	(37328443)	C	AluY	SINE/Alu	(3)	308	1	1623058
11	27.2	2.0	2.0	chr17	64836984	64837033	(18420408)	+	(CCCGCCT)n	Simple_repeat	1	51	(0)	1657417
441	20.4	4.1	0.6	chr17	74334125	74334248	(8923193)	C	L1MB8	LINE/L1	(356)	5828	5706	1673958
270	29.2	4.9	1.4	chr17	74334301	74334439	(8923002)	C	MER5A	DNA/hAT-Charlie	(43)	146	3	1673961
884	23.5	2.4	0.0	chr17	77298816	77298977	(5958464)	C	FRAM	SINE/Alu	(10)	166	1	1679832
250	32.0	12.3	1.5	chr17	77299070	77299199	(5958242)	C	MIRc	SINE/MIR	(102)	166	21	1679833
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
1966	15.0	1.6	0.0	chr18	12427415	12427721	(67945564)	+	AluSz6	SINE/Alu	1	312	(0)	1707430
333	34.3	0.0	0.0	chr18	46451121	46451225	(33922060)	C	L4_A_Mam	LINE/RTE-X	(866)	4124	4020	1748677
342	35.0	0.0	0.0	chr18	46451226	46451345	(33921940)	+	MER5B	DNA/hAT-Charlie	1	120	(58)	1748678
15	4.3	0.0	0.0	chr18	46451398	46451407	(33921878)	+	(AAAT)n	Simple_repeat	1	10	(0)	1748679
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2405	9.5	0.0	0.0	chr19	521479	521784	(58095832)	C	AluSx1	SINE/Alu	(6)	306	1	1797076
2140	18.7	3.9	5.0	chr19	521785	521807	(58095809)	C	MER21A	LTR/ERVL	(539)	392	376	1797075
724	20.7	15.9	0.5	chr19	521813	522035	(58095581)	C	MER21A	LTR/ERVL	(667)	264	1	1797075
2362	7.7	0.0	2.3	chr19	522049	522358	(58095258)	C	AluY	SINE/Alu	(8)	303	1	1797077
213	47.3	0.0	0.0	chr19	1057497	1057625	(57559991)	+	L3b	LINE/CR1	4523	4651	(581)	1798150
811	15.6	0.8	0.0	chr19	1057633	1057754	(57559862)	+	FLAM_C	SINE/Alu	11	133	(10)	1798151
18	13.6	4.9	0.0	chr19	1057756	1057796	(57559820)	+	GA-rich	Low_complexity	1	43	(0)	1798152
1404	12.8	0.5	5.3	chr19	1141697	1141922	(57475694)	C	AluJo	SINE/Alu	(97)	215	1	1798281
239	32.1	9.3	0.7	chr19	2534298	2534435	(56083181)	+	L2c	LINE/L2	2738	2888	(531)	1801031
181	22.2	0.0	0.0	chr19	2534619	2534654	(56082962)	C	MIR3	SINE/MIR	(79)	129	94	1801032
1588	18.4	9.6	1.2	chr19	2534655	2535069	(56082547)	C	MLT2B4	LTR/ERVL	(57)	458	1	1801033
358	21.1	4.0	2.1	chr19	15159008	15159104	(43458512)	C	MLT1O	LTR/ERVL-MaLR	(20)	522	424	1831251
353	32.7	8.4	2.5	chr19	15159250	15159484	(43458132)	C	MLT1O	LTR/ERVL-MaLR	(169)	373	124	1831251
625	24.5	0.7	2.0	chr19	16814378	16814523	(41803093)	C	MIRb	SINE/MIR	(52)	216	73	1834872
210	31.7	11.6	4.6	chr19	16814785	16814936	(41802680)	C	MIRc	SINE/MIR	(42)	226	63	1834873
1192	10.6	0.3	0.0	chr19	44456469	44457877	(14159739)	C	ACRO1	Satellite/acro	(55)	1412	1	1878760
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2117	20.1	6.6	11.1	chr2	37558495	37558561	(204634968)	+	MLT1F2	LTR/ERVL-MaLR	504	560	(0)	1967913
449	32.5	11.8	7.3	chr2	37558562	37558618	(204634911)	+	LTR78	LTR/ERV1	571	623	(681)	1967912
468	35.5	4.9	0.7	chr2	37558797	37559068	(204634461)	+	LTR78	LTR/ERV1	841	1124	(180)	1967912
182	31.4	11.7	8.1	chr2	48090819	48091189	(194102340)	C	L2c	LINE/L2	(34)	3353	2968	1985357
1436	15.7	9.0	0.0	chr2	48091321	48091614	(194101915)	+	MER33	DNA/hAT-Charlie	2	324	(0)	1985358
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
470	31.5	16.3	0.6	chr20	1450645	1450960	(62993207)	+	L1ME4a	LINE/L1	5534	5908	(216)	2265028
325	25.9	6.9	0.0	chr20	1451475	1451582	(62992585)	+	MIRc	SINE/MIR	40	155	(113)	2265029
286	17.0	1.9	0.0	chr20	2387369	2387421	(62056746)	C	MamGypLTR3	LTR/Gypsy	(243)	651	598	2266867
253	30.4	7.4	6.7	chr20	2387490	2387623	(62056544)	C	MamGypLTR3	LTR/Gypsy	(400)	581	447	2266867
219	30.4	13.2	4.2	chr20	3495304	3495447	(60948720)	C	MER5B	DNA/hAT-Charlie	(15)	163	5	2269005
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
744	18.6	6.0	0.0	chr20	47691430	47691569	(16752598)	C	MER5B	DNA/hAT-Charlie	(29)	149	1	2340645
218	23.8	14.3	2.3	chr20	47691575	47691660	(16752507)	C	L2a	LINE/L2	(339)	3080	2983	2340644
821	19.9	0.0	0.0	chr20	47691926	47692061	(16752106)	C	FRAM	SINE/Alu	(37)	139	4	2340646
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
627	27.0	2.1	1.6	chr21	9257721	9257908	(37452075)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2374356
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
398	8.6	0.2	0.0	chr21	10426491	10427038	(36282945)	+	(GTGGTG)n	Simple_repeat	1	549	(0)	2375540
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
199	33.9	4.6	1.6	chr21	44737884	44738009	(1971974)	C	L2b	LINE/L2	(203)	3172	3043	2422094
404	31.7	9.6	2.9	chr21	44738181	44738521	(1971462)	+	L1ME4b	LINE/L1	272	637	(255)	2422095
255	8.3	0.6	0.3	chr21	45340395	45340746	(1369237)	+	(CATC)n	Simple_repeat	1	354	(0)	2422759
487	26.0	6.1	1.9	chr22	11309822	11309978	(39508490)	C	MIRb	SINE/MIR	(72)	196	33	2425024
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
208	35.2	1.1	0.2	chr22	30465030	30465847	(20352621)	+	(CAAC)n	Simple_repeat	1	827	(0)	2452665
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
224	25.0	1.8	1.8	chr3	10388158	10388214	(187907345)	+	L2b	LINE/L2	3319	3375	(0)	2509306
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
238	29.4	11.2	2.7	chr3	165642986	165643132	(32652427)	+	LTR16C	LTR/ERVL	329	489	(0)	2736499
846	30.9	3.5	1.4	chr3	165643141	165643416	(32652143)	+	MLT1I	LTR/ERVL-MaLR	120	401	(10)	2736500
290	33.2	8.0	5.5	chr4	36904	37123	(190177432)	C	MIRb	SINE/MIR	(12)	256	31	2788547
15238	6.6	0.1	0.3	chr4	37398	40540	(190174015)	C	L1P2	LINE/L1	(2054)	4265	1143	2788548
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
376	36.6	6.8	1.1	chr4	56077716	56077980	(134136575)	C	L2c	LINE/L2	(37)	3350	3070	2871981
303	7.7	3.7	0.0	chr4	56078096	56078147	(134136408)	C	L1MA5A	LINE/L1	(5)	6292	6239	2871982
12	20.9	0.0	4.8	chr4	75666241	75666282	(114548273)	+	(AATTAAT)n	Simple_repeat	1	42	(0)	2897805
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
14	22.0	2.4	0.0	chr5	1262439	1262480	(180275779)	+	(TTTTCCT)n	Simple_repeat	1	43	(0)	3056089
742	27.6	14.0	3.9	chr5	76959961	76960546	(104577713)	C	L2a	LINE/L2	(0)	3426	2764	3155931
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
196	21.1	0.0	0.0	chr6	944388	944425	(169861554)	C	L2b	LINE/L2	(16)	3359	3322	3315425
181	29.5	17.8	2.6	chr6	110079817	110080011	(60725968)	+	MamTip2	DNA/hAT-Tip100	45	275	(30)	3473133
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
182	24.7	1.3	0.0	chr6	170452770	170453217	(352762)	+	(GT)n	Simple_repeat	1	454	(0)	3557445
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
687	20.4	11.3	1.3	chr7	99707265	99707423	(59638550)	+	MER5B	DNA/hAT-Charlie	2	178	(0)	3705207
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
359	31.0	10.8	3.0	chr7	142046171	142046433	(17299540)	C	L1MEd	LINE/L1	(6201)	885	600	3770146
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
2667	5.9	0.0	0.0	chr8	42007681	42007987	(103130649)	+	AluYm1	SINE/Alu	1	307	(4)	3857963
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
807	23.5	2.3	9.3	chr9	114762692	114763014	(23631703)	C	AluJr4	SINE/Alu	(12)	300	1	4154404
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
464	31.8	14.9	5.6	chrX	112629327	112630063	(43410832)	+	L2c	LINE/L2	2562	3385	(2)	4511652
275	20.9	4.3	0.0	chrY	10664501	10664567	(46562848)	C	Alu	SINE/Alu	(8)	293	224	4587924
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157