21057	4.7	0.7	0.1	chr1	16105517	16108299	(232848123)	C	HERVK9-int	LTR/ERVK	(3223)	2798	1	26705
283	28.8	5.2	10.9	chr1	22080082	22080264	(226876158)	C	MIR3	SINE/MIR	(6)	202	31	39382
4063	7.3	0.8	0.2	chr1	29715689	29716197	(219240225)	+	MER9a3	LTR/ERVK	1	512	(0)	57146
753	11.9	3.3	0.0	chr1	29716198	29716315	(219240107)	+	HERVK9-int	LTR/ERVK	1	122	(5899)	57146
5587	10.5	4.6	3.0	chr1	29716311	29716550	(219239872)	C	HERVK9-int	LTR/ERVK	(4949)	1072	815	57147
187	21.1	0.0	7.1	chr1	29716551	29716606	(219239816)	C	MER5B	DNA/hAT-Charlie	(72)	106	55	57148
5587	10.5	4.6	3.0	chr1	29716607	29717265	(219239157)	C	HERVK9-int	LTR/ERVK	(4949)	814	102	57147
832	23.7	12.6	1.1	chr1	38215199	38215471	(210740951)	+	L2a	LINE/L2	3116	3424	(2)	74278
280	24.7	2.5	1.3	chr1	38215494	38215571	(210740851)	C	MIRb	SINE/MIR	(14)	254	176	74279
449	32.0	13.2	5.4	chr1	50290508	50290897	(198665525)	C	L2c	LINE/L2	(53)	3334	2910	96492
1150	6.8	1.3	0.0	chr1	50290942	50291089	(198665333)	C	L1P2	LINE/L1	(443)	5711	5562	96493
2123	21.6	14.3	2.5	chr1	54643773	54644368	(194312054)	C	L1MDa	LINE/L1	(4672)	1961	1274	105555
183	27.8	6.2	8.2	chr1	61286016	61286113	(187670309)	+	MIR1_Amn	SINE/MIR	49	144	(86)	117899
861	13.3	0.0	0.0	chr1	61873522	61873656	(187082766)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	231	119027
2237	15.2	4.3	1.2	chr1	61873657	61874084	(187082338)	+	MER61C	LTR/ERV1	1	428	(0)	119028
851	22.6	0.4	10.3	chr1	61874085	61874172	(187082250)	C	MLT1A0	LTR/ERVL-MaLR	(130)	235	158	119027
51	0.0	0.0	0.0	chr1	75996005	75996048	(172960374)	+	(TG)n	Simple_repeat	1	44	(0)	140766
13034	6.9	0.9	0.0	chr1	78161480	78164098	(170792324)	+	L1PA6	LINE/L1	3517	6154	(0)	144198
3336	10.1	0.0	2.2	chr1	80547508	80547971	(168408451)	+	LTR10C	LTR/ERV1	138	591	(0)	147342
308	33.0	1.0	0.0	chr1	94070115	94070217	(154886205)	+	MamRep1894	DNA/hAT	9	112	(11)	167235
198	26.0	6.8	14.0	chr1	94070516	94070658	(154885764)	C	L2c	LINE/L2	(15)	3372	3241	167236
2802	9.1	5.8	0.2	chr1	94445299	94445706	(154510716)	+	HERVK9-int	LTR/ERVK	1	432	(5589)	167807
23697	5.8	1.1	0.3	chr1	94445706	94448660	(154507762)	+	HERVK9-int	LTR/ERVK	953	3931	(2090)	167807
14529	12.3	1.6	1.7	chr1	102833712	102835940	(146120482)	+	HERVK3-int	LTR/ERVK	1	2228	(4974)	179824
5158	22.3	0.9	0.8	chr1	109725949	109727169	(139229253)	+	HERVK3-int	LTR/ERVK	1	1259	(5943)	189007
464	7.8	0.0	0.0	chr1	109727174	109727237	(139229185)	C	HERVH-int	LTR/ERV1	(7649)	64	1	189008
2035	10.4	18.7	0.3	chr1	109727238	109727604	(139228818)	C	LTR7	LTR/ERV1	(0)	450	1	189008
7095	6.4	0.7	0.0	chr1	111047314	111048408	(137908014)	C	L1PA7	LINE/L1	(1)	6153	5054	191052
3563	20.6	10.3	7.6	chr1	113693683	113695204	(135261218)	+	L1MEc	LINE/L1	76	1718	(4682)	195361
524	35.0	6.1	3.4	chr1	113695228	113695576	(135260846)	C	L2	LINE/L2	(524)	2895	2537	195362
195	33.1	5.5	4.7	chr1	118488543	118488669	(130467753)	+	AmnSINE1	SINE/5S-Deu-L2	442	569	(6)	202826
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
3080	18.7	8.1	2.0	chr1	172679006	172679669	(76276753)	C	MER50	LTR/ERV1	(23)	711	4	254564
381	26.3	5.2	7.8	chr1	184367411	184367602	(64588820)	+	L2c	LINE/L2	3229	3417	(9)	272525
339	25.6	5.5	8.1	chr1	187624754	187624902	(61331520)	+	MER110-int	LTR/ERV1	2785	2929	(1718)	277283
1218	22.0	3.8	5.9	chr1	187624921	187625300	(61331122)	+	MER67C	LTR/ERV1	1	397	(314)	277284
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
21	0.0	0.0	0.0	chr1	201804580	201804602	(47151820)	+	(A)n	Simple_repeat	1	23	(0)	296663
20841	22.3	3.8	5.1	chr1	212422944	212424880	(36531542)	+	PRIMA41-int	LTR/ERV1	946	2902	(4854)	314480
43986	4.8	2.5	1.2	chr1	213025993	213031102	(35925320)	C	HERVK9-int	LTR/ERVK	(0)	6021	786	315597
181	24.1	0.0	9.4	chr1	213031103	213031166	(35925256)	C	MER5B	DNA/hAT-Charlie	(61)	117	60	315598
43986	4.8	2.5	1.2	chr1	213031167	213031931	(35924491)	C	HERVK9-int	LTR/ERVK	(0)	785	1	315597
840	26.4	8.0	0.4	chr1	224759021	224759252	(24197170)	+	MIRb	SINE/MIR	18	268	(0)	333113
3802	13.8	2.3	0.3	chr1	224759279	224759869	(24196553)	C	LTR26	LTR/ERV1	(0)	603	1	333114
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
8884	10.7	3.5	1.5	chr1	231429576	231429923	(17526499)	C	THE1D-int	LTR/ERVL-MaLR	(538)	1093	747	343483
10530	6.4	10.4	0.1	chr1	231429924	231431339	(17525083)	C	LTR12C	LTR/ERV1	(0)	1579	2	343486
498	35.0	12.7	3.5	chr1	232717252	232717768	(16238654)	+	L2b	LINE/L2	2304	2875	(544)	345322
4533	5.0	4.9	0.0	chr1	232717769	232718330	(16238092)	C	LTR10C	LTR/ERV1	(0)	591	1	345323
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
242	38.2	1.3	4.3	chr10	7716843	7716948	(126080474)	+	MIRb	SINE/MIR	17	118	(150)	381485
2316	8.6	0.7	2.0	chr10	7716949	7717251	(126080171)	C	AluSq2	SINE/Alu	(14)	299	1	381486
5692	7.1	2.6	5.5	chr10	31969059	31970051	(101827371)	+	SVA_E	Retroposon/SVA	1	862	(520)	421074
32	0.0	0.0	0.0	chr10	31970052	31970081	(101827341)	+	(G)n	Simple_repeat	1	30	(0)	421075
6496	8.0	2.8	6.2	chr10	31970082	31971613	(101825809)	+	SVA_E	Retroposon/SVA	422	1364	(18)	421074
35955	17.0	2.0	1.6	chr10	42487021	42494108	(91303314)	+	HERVK9-int	LTR/ERVK	1	7369	(65)	432150
2242	10.1	0.0	0.3	chr10	43341285	43341572	(90455850)	+	AluSz	SINE/Alu	9	295	(17)	433283
883	29.1	20.5	2.1	chr10	43341573	43341774	(90455648)	C	L2a	LINE/L2	(1339)	2080	1812	433282
15	13.9	0.0	0.0	chr10	43341905	43341928	(90455494)	+	(T)n	Simple_repeat	1	24	(0)	433284
1954	9.6	0.0	0.0	chr10	43342029	43342278	(90455144)	C	AluSx1	SINE/Alu	(62)	250	1	433285
23785	4.7	0.4	0.1	chr10	63847945	63850729	(69946693)	+	HERVK9-int	LTR/ERVK	5	2798	(3223)	462520
14097	19.0	3.7	3.0	chr10	87563576	87566423	(46230999)	+	L1MA4A	LINE/L1	732	3937	(3625)	501470
6843	22.4	6.5	2.2	chr10	113830979	113832679	(19964743)	+	L1MC1	LINE/L1	3379	5186	(960)	544954
19	11.7	0.0	0.0	chr10	118857209	118857236	(14940186)	+	(A)n	Simple_repeat	1	28	(0)	552734
246	21.7	0.0	0.0	chr10	121187728	121187773	(12609649)	+	MamGypLTR1d	LTR/Gypsy	489	534	(279)	556767
634	29.9	8.9	1.9	chr10	132671691	132671898	(1125524)	C	MIR	SINE/MIR	(36)	226	3	571893
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
280	32.5	7.0	0.0	chr11	13961674	13961793	(121124829)	C	MIR3	SINE/MIR	(47)	161	33	593098
2251	26.2	6.2	8.4	chr11	31278813	31279239	(103807383)	C	L1ME2	LINE/L1	(1409)	4737	4357	619740
15	0.0	0.0	0.0	chr11	31279247	31279263	(103807359)	+	(TG)n	Simple_repeat	1	17	(0)	619742
3574	6.0	1.5	0.6	chr11	31279428	31279894	(103806728)	+	L1PA7	LINE/L1	5678	6148	(6)	619743
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
18890	11.5	1.3	0.7	chr11	62053020	62055871	(73030751)	C	HERVK3-int	LTR/ERVK	(4333)	2869	1	661363
2357	4.8	1.4	1.4	chr11	66050345	66050637	(69035985)	+	AluY	SINE/Alu	1	293	(18)	668732
32	0.0	2.9	0.0	chr11	66050638	66050671	(69035951)	+	(AAAT)n	Simple_repeat	1	35	(0)	668733
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
969	25.8	10.6	7.0	chr11	86749330	86749739	(48336883)	C	LTR33A_	LTR/ERVL	(77)	454	24	706048
300	17.9	2.3	3.9	chr11	86749766	86749861	(48336761)	C	MIR	SINE/MIR	(67)	201	111	706050
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
2575	6.4	0.0	0.3	chr11	102181164	102181475	(32905147)	+	AluY	SINE/Alu	1	311	(0)	727523
2393	9.5	0.7	0.0	chr11	102181813	102182118	(32904504)	C	AluSx3	SINE/Alu	(3)	308	1	727524
1546	30.2	5.2	4.4	chr11	117447303	117447602	(17639020)	+	L1ME4a	LINE/L1	5825	6121	(3)	751172
285	31.3	2.0	2.0	chr11	117447852	117447952	(17638670)	C	Tigger16b	DNA/TcMar-Tigger	(23)	313	213	751176
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
260	36.5	6.9	1.3	chr12	30014412	30014561	(103260748)	C	L2c	LINE/L2	(311)	3076	2918	823154
1270	9.9	0.6	0.0	chr12	102263050	102263210	(31012099)	+	AluSx	SINE/Alu	1	162	(150)	928787
600	24.3	1.6	0.5	chr12	103508719	103508872	(29766437)	+	MIRc	SINE/MIR	8	160	(108)	930767
766	28.6	2.6	3.0	chr12	103508885	103509118	(29766191)	C	MIR	SINE/MIR	(0)	262	30	930768
58063	2.6	1.9	1.2	chr12	111821804	111824274	(21451035)	C	HERVK3-int	LTR/ERVK	(3835)	3367	817	947973
5481	15.9	10.7	0.3	chr13	61902819	61903829	(52460499)	+	LTR28C	LTR/ERV1	1	1129	(0)	1055341
7633	8.4	19.7	0.0	chr13	62447198	62448462	(51915866)	C	LTR12C	LTR/ERV1	(0)	1579	4	1056019
1785	13.8	6.6	3.8	chr13	62448463	62448674	(51915654)	+	THE1D	LTR/ERVL-MaLR	168	381	(0)	1056018
3033	21.1	5.7	6.0	chr13	62793190	62794006	(51570322)	+	LTR8B	LTR/ERV1	3	816	(4)	1056444
356	21.9	7.2	10.5	chr13	62794007	62794048	(51570280)	C	MIR	SINE/MIR	(108)	154	121	1056443
9346	16.1	3.5	0.8	chr13	63009431	63011011	(51353317)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	1056706
7337	10.1	12.3	0.0	chr13	63693000	63694099	(50670229)	C	LTR12D	LTR/ERV1	(0)	1254	1	1057608
1593	20.2	4.9	3.6	chr13	63694100	63694310	(50670018)	C	MLT1B	LTR/ERVL-MaLR	(175)	215	1	1057607
1158	26.4	7.6	3.4	chr13	65502732	65503171	(48861157)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	6	1059892
611	26.3	8.3	0.1	chr13	65503177	65503379	(48860949)	C	L1MB7	LINE/L1	(598)	6064	5844	1059891
883	24.1	4.3	0.4	chr13	65503353	65503619	(48860709)	C	L1MB7	LINE/L1	(3461)	3183	2906	1059891
22979	13.4	2.3	2.0	chr13	66646627	66653686	(47710642)	+	L1MA3	LINE/L1	12	7085	(639)	1061294
413	25.7	14.6	1.8	chr13	73831202	73831427	(40532901)	+	MIR	SINE/MIR	3	262	(0)	1071152
487	27.8	9.8	1.1	chr13	73831428	73831689	(40532639)	C	Tigger15a	DNA/TcMar-Tigger	(105)	610	324	1071153
6489	24.5	3.2	3.0	chr13	77678571	77682770	(36681558)	+	L1PB4	LINE/L1	717	5052	(2510)	1076549
250	35.4	5.8	3.5	chr13	100108391	100108592	(14255736)	+	L2	LINE/L2	2851	3057	(362)	1107421
473	26.2	15.2	0.0	chr13	100108758	100108925	(14255403)	+	L1ME4b	LINE/L1	692	889	(3)	1107422
2176	4.0	0.0	0.0	chr14	19668195	19668466	(87375252)	+	L1PA6	LINE/L1	5515	5786	(368)	1127019
16	28.9	0.0	3.2	chr14	19668474	19668535	(87375183)	+	(GCG)n	Simple_repeat	1	62	(0)	1127020
3970	30.4	5.6	5.6	chr14	38560973	38562638	(68481080)	+	L1M2	LINE/L1	18	1958	(5191)	1154406
2520	4.5	1.0	0.0	chr14	45160540	45160828	(61882890)	C	AluY	SINE/Alu	(7)	304	13	1162767
2091	24.8	4.4	5.5	chr14	45161338	45161497	(61882221)	C	L2	LINE/L2	(469)	2950	2800	1162768
1950	16.2	0.7	0.0	chr14	45161498	45161793	(61881925)	+	AluJb	SINE/Alu	2	299	(13)	1162769
28	16.7	0.0	0.0	chr14	51565554	51565607	(55478111)	+	(TGGTGG)n	Simple_repeat	1	54	(0)	1171658
182	33.3	8.2	4.3	chr14	51565786	51565879	(55477839)	C	MIRc	SINE/MIR	(109)	159	62	1171659
2473	6.5	0.0	0.3	chr14	51565883	51566172	(55477546)	+	AluY	SINE/Alu	1	289	(22)	1171660
3191	27.5	6.2	6.7	chr14	53822237	53824026	(53219692)	+	L1MEd	LINE/L1	3623	5403	(743)	1175058
1694	28.3	7.8	1.0	chr14	53824043	53824627	(53219091)	+	MLT2E	LTR/ERVL	1	628	(0)	1175062
273	27.8	12.0	0.6	chr14	54806218	54806391	(52237327)	C	MIRb	SINE/MIR	(4)	264	66	1176473
18724	11.1	2.1	0.2	chr14	69811901	69814583	(37229135)	+	HERVK3-int	LTR/ERVK	23	2757	(4445)	1200238
4284	15.7	3.3	0.8	chr14	76687591	76688292	(30355426)	+	MER50	LTR/ERV1	3	722	(12)	1212769
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2964	23.6	10.5	0.6	chr15	55985789	55986534	(46004655)	+	L1MC4	LINE/L1	6705	7520	(522)	1316526
2373	7.3	0.0	2.1	chr15	55986581	55986894	(46004295)	C	AluY	SINE/Alu	(0)	311	1	1316528
1636	23.6	9.5	4.0	chr15	68941330	68941805	(33049384)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1339346
2232	12.5	0.3	0.0	chr15	70716940	70717234	(31273955)	+	AluSp	SINE/Alu	1	296	(17)	1342622
983	21.7	9.0	0.0	chr15	70717360	70717562	(31273627)	C	MER58A	DNA/hAT-Charlie	(1)	223	1	1342623
773	22.8	7.1	0.0	chr15	76621434	76621604	(25369585)	C	MER20	DNA/hAT-Charlie	(0)	219	36	1352838
233	36.5	5.3	0.0	chr15	80821428	80821534	(21169655)	C	L2	LINE/L2	(609)	2810	2698	1360173
616	29.1	5.1	4.6	chr15	84956059	84956407	(17034782)	C	HAL1	LINE/L1	(104)	2403	2053	1367000
44	10.6	0.0	2.6	chr15	84956408	84956480	(17034709)	+	(TCTT)n	Simple_repeat	1	71	(0)	1367001
1922	17.3	0.0	3.7	chr15	84956481	84956804	(17034385)	C	AluJr	SINE/Alu	(0)	312	1	1367002
25760	2.9	0.7	0.0	chr15	89634319	89640301	(12350888)	+	L1PA3	LINE/L1	129	6151	(4)	1374594
19	12.1	2.8	0.0	chr15	89640303	89640338	(12350851)	+	(TAA)n	Simple_repeat	1	37	(0)	1374595
966	23.9	4.3	0.5	chr15	89640357	89640579	(12350610)	C	MIR	SINE/MIR	(30)	232	1	1374596
12	26.6	0.0	2.3	chr15	89640628	89640670	(12350519)	+	(GGAT)n	Simple_repeat	1	43	(0)	1374597
1973	13.3	0.0	5.6	chr15	89640703	89641024	(12350165)	+	AluSx	SINE/Alu	1	304	(8)	1374598
2807	2.9	0.0	0.0	chr16	3402449	3402757	(86935588)	C	AluYk3	SINE/Alu	(2)	309	1	1399110
2089	11.7	0.0	0.3	chr16	3403151	3403470	(86934875)	C	AluSx1	SINE/Alu	(0)	312	1	1399111
336	23.3	0.0	0.0	chr16	4034057	4034129	(86304216)	C	MLT2F	LTR/ERVL	(402)	261	189	1400302
400	22.7	11.6	4.3	chr16	4034212	4034395	(86303950)	C	Ricksha_c	DNA/MULE-MuDR	(1665)	383	185	1400303
182	34.8	6.3	10.6	chr16	11048921	11049005	(79289340)	+	MIRb	SINE/MIR	48	128	(140)	1414813
2380	8.4	0.3	0.3	chr16	11049006	11049304	(79289041)	C	AluSg	SINE/Alu	(10)	300	2	1414814
356	24.6	14.3	2.8	chr16	14095369	14095510	(76242835)	+	MIRb	SINE/MIR	78	238	(24)	1421506
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
34901	4.8	0.8	0.4	chr17	6876861	6881020	(76376421)	C	HERVK9-int	LTR/ERVK	(1843)	4178	1	1557851
1231	11.9	0.0	0.0	chr17	8579978	8580137	(74677304)	+	AluSx1	SINE/Alu	134	293	(19)	1561022
225	31.6	3.8	4.0	chr17	8580469	8580569	(74676872)	+	L2c	LINE/L2	3303	3426	(0)	1561023
490	34.1	6.7	5.7	chr17	8580721	8581219	(74676222)	C	L2b	LINE/L2	(0)	3375	2866	1561024
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
6183	19.5	2.9	2.5	chr17	27684738	27686098	(55571343)	+	HERVK9-int	LTR/ERVK	4	1380	(4716)	1587249
2285	10.2	0.6	1.0	chr17	46188749	46189061	(37068380)	+	AluSx1	SINE/Alu	1	312	(0)	1623541
553	20.5	6.8	9.6	chr17	46189084	46189249	(37068192)	+	FAM	SINE/Alu	18	178	(7)	1623542
748	12.6	2.6	0.9	chr17	50343511	50343621	(32913820)	C	FLAM_A	SINE/Alu	(10)	132	20	1631611
17	4.9	0.0	0.0	chr17	50343651	50343671	(32913770)	+	(A)n	Simple_repeat	1	21	(0)	1631612
2320	10.5	1.9	0.0	chr17	50343677	50343980	(32913461)	+	AluSg	SINE/Alu	1	310	(0)	1631613
365	27.2	11.7	5.9	chr17	65876810	65877114	(17380327)	C	HAL1	LINE/L1	(1431)	1076	752	1659387
716	26.7	9.2	4.4	chr17	65877286	65877606	(17379835)	+	LTR16E1	LTR/ERVL	200	537	(1)	1659388
219	38.4	2.3	8.5	chr17	69339783	69339970	(13917471)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	1665564
892	20.6	6.2	0.0	chr17	82320749	82320913	(936528)	+	AluJb	SINE/Alu	137	312	(0)	1687481
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
576	31.2	3.3	1.5	chr18	54074009	54074213	(26299072)	C	MIRb	SINE/MIR	(0)	268	60	1760668
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2216	8.8	0.0	4.6	chr19	7093313	7093472	(51524144)	+	AluSc	SINE/Alu	144	291	(18)	1811978
1210	25.9	6.2	5.5	chr19	7093473	7093848	(51523768)	+	LTR16	LTR/ERVL	59	436	(2)	1811977
33559	12.2	1.3	0.8	chr19	9454393	9459482	(49158134)	+	HERVK9-int	LTR/ERVK	1	4889	(1132)	1817462
19712	16.7	1.3	0.5	chr19	9511237	9514634	(49102982)	C	HERVK3-int	LTR/ERVK	(3744)	3458	1	1817557
4031	10.2	0.0	10.2	chr19	15851296	15851592	(42766024)	+	MER4B	LTR/ERV1	349	610	(0)	1832637
729	31.9	3.7	5.4	chr19	15851593	15851879	(42765737)	C	MLT1I	LTR/ERVL-MaLR	(58)	353	64	1832636
44583	6.1	0.9	0.7	chr19	21412530	21417699	(37199917)	C	HERVK9-int	LTR/ERVK	(5)	6016	785	1843997
195	22.2	1.8	8.5	chr19	21417700	21417758	(37199858)	C	MER5B	DNA/hAT-Charlie	(69)	109	55	1843998
44583	6.1	0.9	0.7	chr19	21417759	21418531	(37199085)	C	HERVK9-int	LTR/ERVK	(5)	784	1	1843997
11031	18.9	1.5	1.9	chr19	22193241	22195335	(36422281)	+	HERVK3-int	LTR/ERVK	225	2312	(4890)	1844989
11479	17.2	6.7	1.3	chr19	23865058	23867548	(34750068)	+	HERVK3-int	LTR/ERVK	1	2627	(4575)	1847297
1012	11.5	0.6	0.6	chr19	29742078	29742233	(28875383)	+	MLT1A0	LTR/ERVL-MaLR	1	156	(209)	1850735
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
31954	5.2	0.5	0.2	chr19	38937290	38941326	(19676290)	C	HERVK9-int	LTR/ERVK	(1975)	4046	1	1867796
1192	10.6	0.3	0.0	chr19	44456469	44457877	(14159739)	C	ACRO1	Satellite/acro	(55)	1412	1	1878760
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
333	17.5	1.0	7.2	chr19	51042550	51042660	(7574956)	+	LTR53-int	LTR/ERVL	888	991	(2565)	1894888
1012	19.7	2.8	0.0	chr19	51042669	51042876	(7574740)	C	L1M5	LINE/L1	(383)	5796	5583	1894891
1911	15.6	0.3	0.3	chr19	51042878	51043165	(7574451)	+	AluJb	SINE/Alu	1	288	(24)	1894892
27970	12.3	1.8	0.3	chr19	51807486	51811585	(6806031)	C	HERVK3-int	LTR/ERVK	(3033)	4169	8	1896288
20970	5.9	3.8	3.3	chr19	52752278	52753962	(5863654)	C	HERVK9-int	LTR/ERVK	(3223)	2798	1045	1898101
242	5.1	0.0	0.0	chr19	52753963	52754001	(5863615)	+	Alu	SINE/Alu	262	300	(1)	1898102
20970	5.9	3.8	3.3	chr19	52754002	52754253	(5863363)	C	HERVK9-int	LTR/ERVK	(4977)	1044	783	1898101
200	23.6	0.0	8.3	chr19	52754254	52754313	(5863303)	C	MER5B	DNA/hAT-Charlie	(69)	109	55	1898103
20970	5.9	3.8	3.3	chr19	52754314	52755061	(5862555)	C	HERVK9-int	LTR/ERVK	(3223)	782	1	1898101
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
420	27.8	8.4	1.1	chr19	58291559	58291995	(325621)	C	L2a	LINE/L2	(9)	3417	2902	1909278
323	30.2	10.5	0.5	chr2	209455	209677	(241983852)	+	L2a	LINE/L2	2741	2988	(431)	1911035
483	26.8	13.5	2.8	chr2	209741	209990	(241983539)	+	L2a	LINE/L2	3146	3426	(0)	1911035
416	30.6	11.2	1.6	chr2	9030176	9030361	(233163168)	C	MIR3	SINE/MIR	(1)	207	2	1922205
579	28.6	15.0	0.9	chr2	9030573	9030784	(233162745)	C	MIRc	SINE/MIR	(2)	266	20	1922206
22634	4.9	1.2	0.5	chr2	19923260	19924282	(222269247)	+	HERVK9-int	LTR/ERVK	1	1037	(4984)	1939466
2505	6.5	0.0	0.0	chr2	19924283	19924573	(222268956)	+	AluY	SINE/Alu	1	291	(20)	1939467
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
21986	5.2	0.2	0.2	chr2	33916213	33919012	(208274517)	C	HERVK9-int	LTR/ERVK	(3223)	2798	1	1962756
2547	5.9	0.0	0.0	chr2	38420581	38420884	(203772645)	+	AluY	SINE/Alu	1	304	(7)	1969187
262	33.0	4.1	4.1	chr2	38421126	38421223	(203772306)	+	MIRc	SINE/MIR	156	253	(15)	1969188
320	27.6	3.9	0.0	chr2	40551986	40552083	(201641446)	+	MER5B	DNA/hAT-Charlie	77	178	(0)	1972758
20	27.9	3.9	2.8	chr2	40552373	40552459	(201641070)	+	(TTTCTT)n	Simple_repeat	1	89	(0)	1972759
1028	23.1	11.6	9.1	chr2	48146244	48146557	(194046972)	C	L1MCc	LINE/L1	(5999)	424	88	1985454
4355	12.8	5.2	7.6	chr2	50847422	50848278	(191345251)	+	LTR1A2	LTR/ERV1	3	837	(0)	1989320
1036	27.5	4.6	4.3	chr2	55061354	55061711	(187131818)	C	L1MC5a	LINE/L1	(234)	2543	2186	1995209
5292	9.2	1.8	4.4	chr2	55061732	55062550	(187130979)	+	LTR1A2	LTR/ERV1	41	837	(0)	1995211
851	4.6	0.0	2.8	chr2	64453117	64453224	(177740305)	+	AluSx3	SINE/Alu	204	308	(3)	2009383
349	27.8	1.7	5.0	chr2	68043136	68043256	(174150273)	C	L2c	LINE/L2	(8)	3379	3263	2014946
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2132	15.7	7.3	0.2	chr2	97067300	97067695	(145125834)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2053276
4108	13.7	2.4	2.8	chr2	97067709	97068378	(145125151)	C	LTR1F	LTR/ERV1	(0)	772	106	2053277
1776	15.6	0.0	3.3	chr2	118781090	118781391	(123412138)	C	AluJo	SINE/Alu	(10)	302	11	2084242
680	9.4	0.0	0.0	chr2	118781591	118781675	(123411854)	+	AluSz	SINE/Alu	2	86	(226)	2084243
4251	6.6	4.6	0.0	chr2	128680911	128681474	(113512055)	+	LTR10C	LTR/ERV1	1	591	(0)	2099572
8250	8.4	3.6	2.4	chr2	152277893	152278421	(89915108)	C	HERVK9-int	LTR/ERVK	(4648)	1373	811	2132168
196	25.4	0.0	8.7	chr2	152278422	152278490	(89915039)	C	MER5B	DNA/hAT-Charlie	(61)	117	55	2132169
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
21	6.9	0.0	0.0	chr2	176140353	176140383	(66053146)	+	(AAAT)n	Simple_repeat	1	31	(0)	2165696
283	26.6	4.6	0.4	chr2	180255421	180255550	(61937979)	C	MIR	SINE/MIR	(15)	193	44	2171255
626	30.7	8.2	3.5	chr2	180255809	180256221	(61937308)	C	L2b	LINE/L2	(263)	3112	2679	2171256
2203	12.1	0.0	0.0	chr2	214845618	214845914	(27347615)	+	AluSc	SINE/Alu	2	298	(11)	2220194
837	18.4	2.2	5.8	chr2	214845915	214845957	(27347572)	C	MER57E1	LTR/ERV1	(136)	236	190	2220193
20	17.4	0.0	2.4	chr2	214846021	214846061	(27347468)	+	(TA)n	Simple_repeat	1	41	(0)	2220195
580	26.6	1.7	1.6	chr2	214846080	214846304	(27347225)	C	ERV3-16A3_I-int	LTR/ERVL	(3630)	2127	1758	2220196
628	14.4	10.7	0.0	chr2	214846312	214846436	(27347093)	C	MER57E1	LTR/ERV1	(226)	146	7	2220193
334	29.6	1.1	0.0	chr2	214846439	214846526	(27347003)	+	L2	LINE/L2	2675	2763	(656)	2220191
24	12.1	2.2	0.0	chr2	222866739	222866744	(19326785)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2233372
30	5.5	0.0	0.0	chr2	222866745	222866782	(19326747)	+	(C)n	Simple_repeat	1	38	(0)	2233373
2500	11.6	0.0	0.0	chr2	222866823	222867132	(19326397)	C	AluSg	SINE/Alu	(0)	310	1	2233374
22577	4.1	0.9	0.3	chr20	5303885	5306525	(59137642)	+	HERVK9-int	LTR/ERVK	142	2798	(3223)	2272353
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
40	30.7	2.7	2.1	chr20	30815139	30815324	(33628843)	+	GA-rich	Low_complexity	1	191	(0)	2305476
264	31.8	11.3	7.2	chr20	33552737	33553176	(30890991)	+	L2b	LINE/L2	2923	3360	(27)	2311054
1956	16.1	0.3	0.0	chr20	53718692	53718983	(10725184)	C	AluJb	SINE/Alu	(19)	293	1	2354163
548	32.7	5.3	6.3	chr20	58171018	58171382	(6272785)	C	Charlie8	DNA/hAT-Charlie	(1979)	449	89	2362515
1941	14.4	0.7	1.0	chr20	58171417	58171708	(6272459)	+	AluJb	SINE/Alu	2	292	(20)	2362516
206	30.7	13.8	1.2	chr20	61331199	61331363	(3112804)	+	L2a	LINE/L2	2653	2841	(578)	2367236
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
13	15.5	9.3	0.0	chr21	8850633	8850675	(37859308)	+	(TTAAT)n	Simple_repeat	1	47	(0)	2374056
377	11.5	6.5	7.7	chr21	8850721	8850798	(37859185)	C	AluJb	SINE/Alu	(195)	117	41	2374057
2188	10.9	1.3	0.0	chr21	9149811	9150104	(37559879)	C	AluSp	SINE/Alu	(15)	298	1	2374290
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
2093	14.3	0.0	0.3	chr21	10432014	10432313	(36277670)	C	AluSx	SINE/Alu	(13)	299	1	2375552
1894	12.1	1.5	0.7	chr21	10432387	10432659	(36277324)	C	AluSx1	SINE/Alu	(37)	275	1	2375553
3943	22.6	6.2	5.6	chr21	15742711	15743779	(30966204)	C	LTR27E	LTR/ERV1	(0)	1077	7	2379561
226	12.2	8.9	0.0	chr21	15743821	15743861	(30966122)	C	LTR27D	LTR/ERV1	(570)	45	1	2379562
6038	19.8	6.0	11.2	chr22	11064568	11067436	(39751032)	+	REP522	Satellite/telo	1	2719	(1252)	2424865
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
20486	7.4	0.6	0.6	chr22	12073837	12076634	(38741834)	+	HERVK9-int	LTR/ERVK	1	2798	(3223)	2425656
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
195	26.0	18.8	2.8	chr22	28206998	28207104	(22611364)	+	Tigger19a	DNA/TcMar-Tigger	156	283	(40)	2448139
2604	5.6	2.6	0.0	chr22	32472913	32473097	(18345371)	+	AluY	SINE/Alu	126	311	(0)	2457050
3468	11.9	1.1	4.1	chr22	32473098	32473299	(18345169)	+	LTR10C	LTR/ERV1	409	591	(0)	2457049
310	29.2	7.0	0.0	chr22	32473374	32473479	(18344989)	+	L2a	LINE/L2	3301	3414	(12)	2457048
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2406	10.3	0.3	0.0	chr22	36435188	36435498	(14382970)	+	AluSp	SINE/Alu	2	313	(0)	2465032
201	18.2	4.1	2.1	chr22	36435794	36435866	(14382602)	+	MIRb	SINE/MIR	47	116	(146)	2465033
336	34.9	1.4	3.3	chr3	10842296	10842446	(187453113)	C	MER5A	DNA/hAT-Charlie	(2)	187	40	2510222
301	31.2	4.1	1.1	chr3	10842648	10842741	(187452818)	+	L2b	LINE/L2	3271	3367	(8)	2510223
1471	24.1	5.7	4.8	chr3	24718046	24718550	(173577009)	C	L1ME3A	LINE/L1	(30)	6143	5634	2532286
2286	10.2	0.3	1.0	chr3	41271391	41271693	(157023866)	C	AluSx1	SINE/Alu	(11)	301	1	2557262
1877	19.7	7.8	3.8	chr3	41271694	41271829	(157023730)	C	L1ME1	LINE/L1	(353)	5826	5690	2557261
6582	18.6	12.0	2.8	chr3	41271855	41271908	(157023651)	C	L1MEc	LINE/L1	(4532)	1868	1817	2557263
2238	13.0	0.0	0.0	chr3	41271909	41272216	(157023343)	C	AluSz6	SINE/Alu	(4)	308	1	2557264
15503	11.9	1.7	0.1	chr3	46427012	46429266	(151866293)	+	HERVK3-int	LTR/ERVK	1	2293	(4909)	2565375
327	29.3	8.1	6.0	chr3	66115781	66116186	(132179373)	+	MLT1J	LTR/ERVL-MaLR	110	610	(0)	2598715
13783	15.7	2.3	3.4	chr3	85993182	85995082	(112300477)	C	Tigger1	DNA/TcMar-Tigger	(552)	1866	6	2627722
4006	15.9	2.9	1.0	chr3	97232536	97233238	(101062321)	C	MER50	LTR/ERV1	(17)	717	1	2637570
22618	13.1	2.1	0.8	chr3	100596744	100601500	(97694059)	C	L1PB1	LINE/L1	(1734)	5580	707	2641953
1917	14.7	7.2	1.4	chr3	110336119	110336471	(87959088)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2655147
5854	13.4	4.5	3.0	chr3	110336472	110337980	(87957579)	C	L1PA16	LINE/L1	(218)	5948	4410	2655146
22542	10.5	0.9	0.7	chr3	111056364	111062837	(87232722)	+	L1PA7	LINE/L1	8	6468	(1)	2656029
476	34.6	8.4	5.0	chr3	113203175	113203634	(85091925)	C	L2c	LINE/L2	(1)	3386	2910	2658891
2122	23.1	6.9	1.7	chr3	141003565	141004083	(57291476)	C	MLT1F2	LTR/ERVL-MaLR	(12)	548	1	2701615
57	0.0	0.0	0.0	chr3	141004092	141004140	(57291419)	+	(TG)n	Simple_repeat	1	49	(0)	2701616
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
23729	6.6	1.0	0.5	chr3	159714266	159720397	(38575162)	+	L1PA5	LINE/L1	4	6154	(0)	2728624
253	36.7	0.0	0.0	chr3	160668577	160668655	(37626904)	C	MER117	DNA/hAT-Charlie	(39)	158	80	2730153
617	28.6	5.9	5.1	chr3	160668751	160668877	(37626682)	C	MIRb	SINE/MIR	(8)	260	126	2730154
28999	10.9	1.8	1.3	chr3	167177284	167182593	(31112966)	C	HERVK9-int	LTR/ERVK	(1250)	6184	786	2738409
192	23.1	0.0	8.8	chr3	167182594	167182650	(31112909)	C	MER5B	DNA/hAT-Charlie	(69)	109	58	2738410
28999	10.9	1.8	1.3	chr3	167182651	167183421	(31112138)	C	HERVK9-int	LTR/ERVK	(1250)	785	1	2738409
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
1424	18.9	5.5	5.9	chr4	13594564	13594623	(176619932)	+	Charlie1a	DNA/hAT-Charlie	1003	1046	(409)	2809559
2252	8.2	0.0	0.7	chr4	13594624	13594894	(176619661)	+	AluSc5	SINE/Alu	10	279	(30)	2809560
20609	5.7	3.9	3.1	chr4	35140739	35143030	(155071525)	+	HERVK9-int	LTR/ERVK	418	2798	(3223)	2843042
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
26636	7.8	1.1	0.5	chr4	91697861	91701150	(98513405)	C	HERVK9-int	LTR/ERVK	(2362)	3659	291	2921437
531	29.6	6.3	3.0	chr4	92790879	92791108	(97423447)	+	MIR	SINE/MIR	23	260	(2)	2922736
18623	6.7	1.1	0.2	chr4	99489323	99491780	(90722775)	C	HERVK9-int	LTR/ERVK	(3540)	2481	1	2931737
31522	6.1	1.8	1.1	chr4	101902727	101906029	(88308526)	C	HERVK9-int	LTR/ERVK	(1865)	4156	776	2934953
198	23.8	0.0	8.7	chr4	101906030	101906098	(88308457)	C	MER5B	DNA/hAT-Charlie	(61)	117	55	2934954
31522	6.1	1.8	1.1	chr4	101906099	101906854	(88307701)	C	HERVK9-int	LTR/ERVK	(1865)	775	1	2934953
6056	7.7	0.9	0.1	chr4	110577714	110578918	(79635637)	C	L1PA14	LINE/L1	(13)	6148	4931	2946821
194	32.7	4.2	6.4	chr4	110578928	110579100	(79635455)	+	L2a	LINE/L2	2259	2427	(992)	2946813
522	23.9	19.3	3.1	chr4	110579062	110579320	(79635235)	C	L2a	LINE/L2	(0)	3426	3116	2946822
327	36.3	7.1	1.3	chr4	137778875	137779100	(52435455)	+	L2	LINE/L2	1465	1704	(1715)	2982085
15	15.5	2.6	2.6	chr4	137779132	137779169	(52435386)	+	(TTTA)n	Simple_repeat	1	39	(0)	2982086
6122	15.8	3.1	1.0	chr4	137779175	137781113	(52433442)	C	L1PB3	LINE/L1	(7)	6147	4180	2982087
618	15.6	0.8	0.0	chr4	153129256	153130310	(37084245)	+	(CAC)n	Simple_repeat	1	1064	(0)	3004066
35073	10.3	1.9	1.7	chr4	174984913	174989048	(15225507)	C	HERVK9-int	LTR/ERVK	(1049)	4972	969	3033658
180	25.0	0.0	8.8	chr4	174989049	174989105	(15225450)	C	MER5B	DNA/hAT-Charlie	(72)	106	55	3033659
35073	10.3	1.9	1.7	chr4	174989106	174990103	(15224452)	C	HERVK9-int	LTR/ERVK	(1049)	968	1	3033658
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2145	11.9	13.8	2.1	chr5	57084679	57085055	(124453204)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3126058
466	30.6	12.2	1.4	chr5	94317570	94317781	(87220478)	+	MIRc	SINE/MIR	3	240	(28)	3179686
4338	12.6	1.4	2.4	chr5	106535043	106535532	(75002727)	C	L1PA13	LINE/L1	(19)	6144	5656	3195260
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
12	19.9	2.3	4.4	chr5	131164982	131165025	(50373234)	+	(TCCCC)n	Simple_repeat	1	45	(0)	3227449
337	23.8	17.5	1.3	chr5	135600511	135600663	(45937596)	+	L2b	LINE/L2	3178	3360	(15)	3234541
846	20.5	7.0	3.6	chr5	147489779	147489970	(34048289)	+	L1PA17	LINE/L1	5968	6166	(0)	3254342
15	11.7	0.0	0.0	chr5	147489978	147490005	(34048254)	+	(AATAA)n	Simple_repeat	1	28	(0)	3254343
720	30.3	12.3	1.3	chr5	171979593	171979696	(9558563)	+	L1ME2	LINE/L1	4910	5036	(1110)	3296406
4871	5.1	0.0	0.0	chr5	171979697	171980287	(9557972)	C	LTR10C	LTR/ERV1	(0)	591	1	3296407
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
6415	7.9	1.4	1.7	chr6	22987510	22988173	(147817806)	C	L1PA7	LINE/L1	(5)	6540	5883	3349988
2405	8.6	0.0	0.7	chr6	22988174	22988474	(147817505)	C	AluYc	SINE/Alu	(0)	299	1	3349989
41614	17.1	2.1	0.6	chr6	26288437	26295005	(144510974)	C	HERVK3-int	LTR/ERVK	(2)	7200	593	3354957
1963	27.0	12.1	6.6	chr6	28181389	28181829	(142624150)	+	L1MEg	LINE/L1	764	1213	(4871)	3358199
1959	15.2	3.0	0.0	chr6	28181830	28182118	(142623861)	C	AluSz6	SINE/Alu	(13)	299	2	3358201
23167	11.4	2.4	0.7	chr6	32477631	32479143	(138326836)	C	HERVK3-int	LTR/ERVK	(5676)	1526	1	3364953
25331	10.9	1.7	0.6	chr6	32563290	32566890	(138239089)	C	HERVK3-int	LTR/ERVK	(3559)	3643	1	3365077
584	23.8	1.8	8.4	chr6	39158947	39159125	(131646854)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	1	3377560
271	28.9	0.0	2.6	chr6	41416590	41416667	(129389312)	+	L2	LINE/L2	2806	2881	(538)	3381110
1524	21.9	8.4	1.6	chr6	57734720	57735150	(113070829)	+	MLT1C	LTR/ERVL-MaLR	5	467	(0)	3406016
16206	18.1	2.7	1.5	chr6	66923478	66926922	(103879057)	C	HUERS-P3-int	LTR/ERV1	(5348)	3571	1	3414890
648	19.3	4.1	1.8	chr6	66926923	66927105	(103878874)	C	LTR9B	LTR/ERV1	(0)	666	483	3414890
2398	11.0	3.7	0.8	chr6	80550809	80551175	(90254804)	C	MER83B	LTR/ERV1	(0)	378	1	3432749
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
365	32.2	4.6	7.9	chr6	122631580	122631781	(48174198)	C	MIRc	SINE/MIR	(51)	217	23	3490650
500	22.9	10.8	0.0	chr6	130535427	130535566	(40270413)	C	LTR86C	LTR/ERVL	(447)	174	18	3501047
256	31.7	4.8	6.1	chr6	134082950	134083161	(36722818)	C	HAL1ME	LINE/L1	(2141)	324	116	3506128
292	31.3	10.7	5.2	chr6	134083461	134083689	(36722290)	+	LTR78	LTR/ERV1	160	402	(902)	3506143
3480	17.1	2.4	3.3	chr6	134714596	134715363	(36090616)	C	MER50	LTR/ERV1	(48)	734	2	3507353
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
2400	10.9	0.0	1.6	chr6	162545006	162545316	(8260663)	+	AluSx3	SINE/Alu	2	307	(4)	3548330
338	31.8	13.5	1.9	chr6	163321506	163321976	(7484003)	+	L2a	LINE/L2	2163	2696	(723)	3549283
308	27.2	36.3	3.0	chr6	164347000	164347134	(6458845)	C	MamRep38	DNA/hAT	(29)	266	87	3550662
2021	11.9	0.0	0.0	chr7	4888837	4889121	(154456852)	+	AluSz	SINE/Alu	12	296	(16)	3565708
4001	13.3	5.2	4.1	chr7	21410510	21411212	(137934761)	C	MER50	LTR/ERV1	(23)	711	1	3589222
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
2272	12.1	1.3	0.0	chr7	88097140	88097446	(71248527)	C	AluSz	SINE/Alu	(0)	312	2	3688088
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
22398	7.7	0.6	0.5	chr7	103037830	103043543	(56302430)	+	L1P2	LINE/L1	5	5710	(444)	3712117
1977	13.7	0.0	0.7	chr7	103043544	103043813	(56302160)	C	AluSx	SINE/Alu	(44)	268	1	3712118
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
4418	13.4	3.4	1.3	chr7	138424728	138425423	(20920550)	C	MER50	LTR/ERV1	(23)	711	1	3763602
16	0.0	3.9	3.7	chr7	158151565	158151590	(1194383)	+	(GTG)n	Simple_repeat	1	27	(0)	3793030
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
8029	17.0	1.1	1.4	chr8	14180474	14181510	(130957126)	+	LTR57-int	LTR/ERVL	3973	5009	(334)	3813667
204	26.8	1.4	1.4	chr8	18490800	18490871	(126647765)	+	L2	LINE/L2	2034	2105	(1314)	3819722
250	28.2	4.1	0.8	chr8	18491386	18491503	(126647133)	+	MamRep1894	DNA/hAT	1	122	(1)	3819723
21269	5.5	1.3	0.2	chr8	30148797	30151388	(114987248)	C	HERVK9-int	LTR/ERVK	(3402)	2619	1	3839148
183	25.0	0.0	8.8	chr8	48963563	48963619	(96175017)	+	MER5B	DNA/hAT-Charlie	58	109	(69)	3863880
17100	8.5	3.3	2.7	chr8	48963620	48965580	(96173056)	+	HERVK9-int	LTR/ERVK	707	2798	(3223)	3863878
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
1511	23.2	2.3	8.6	chr9	34018895	34019122	(104375595)	+	L1MA5	LINE/L1	5703	5906	(394)	4056491
2039	11.3	0.0	1.5	chr9	34019123	34019396	(104375321)	+	AluSg	SINE/Alu	5	274	(36)	4056493
288	28.1	12.2	5.1	chr9	36700609	36700851	(101693866)	+	L2-1_AMi	LINE/L2	287	554	(681)	4061274
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
18	19.2	5.1	4.9	chr9	64071686	64071763	(74322954)	+	(GATTTGG)n	Simple_repeat	1	82	(0)	4075031
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
2361	10.9	0.3	0.0	chr9	68471643	68471927	(69922790)	+	AluSx1	SINE/Alu	6	291	(21)	4079896
350	32.2	9.0	3.4	chr9	68472095	68472303	(69922414)	C	MIR	SINE/MIR	(18)	244	23	4079897
280	34.8	9.9	2.7	chr9	68472403	68472588	(69922129)	+	MIR3	SINE/MIR	2	202	(6)	4079898
556	31.5	8.9	0.0	chr9	79367128	79367425	(59027292)	C	LTR89	LTR/ERVL?	(358)	521	195	4097143
13	22.4	3.6	3.5	chr9	79367611	79367666	(59027051)	+	GA-rich	Low_complexity	1	58	(0)	4097144
249	26.7	4.5	5.4	chr9	79367685	79367795	(59026922)	C	L2c	LINE/L2	(53)	3334	3225	4097145
334	18.5	0.0	0.0	chr9	84308585	84308649	(54086068)	+	AluJb	SINE/Alu	238	302	(0)	4104423
366	28.2	9.0	0.7	chr9	84308742	84308884	(54085833)	+	MIRc	SINE/MIR	30	185	(83)	4104426
378	24.3	13.4	3.6	chr9	88276349	88276654	(50118063)	+	MER34A1	LTR/ERV1	226	565	(6)	4110812
1091	18.1	8.1	3.6	chr9	88276645	88276925	(50117792)	+	LTR52	LTR/ERVL	69	363	(58)	4110813
230	25.9	0.0	0.0	chr9	88276986	88277039	(50117678)	+	L2	LINE/L2	2260	2313	(1106)	4110810
262	26.4	12.6	2.9	chr9	94037388	94037559	(44357158)	C	L1ME4a	LINE/L1	(75)	6049	5859	4118937
1207	25.2	5.1	5.0	chr9	103761988	103762480	(34632237)	+	MER39	LTR/ERV1	1	707	(0)	4134780
400	31.5	0.0	3.8	chr9	103762662	103762793	(34631924)	+	L2c	LINE/L2	3245	3371	(16)	4134781
394	28.3	5.4	1.9	chr9	124392084	124392224	(14002493)	C	MIRb	SINE/MIR	(102)	160	18	4172478
234	31.1	8.0	1.0	chr9	124392508	124392611	(14002106)	+	MIRb	SINE/MIR	149	260	(8)	4172479
1376	24.4	10.4	4.1	chr9	129317619	129318033	(9076684)	+	MLT1J2	LTR/ERVL-MaLR	1	444	(4)	4182557
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
2586	7.2	0.0	1.0	chrX	20142197	20142502	(135898393)	C	AluSg	SINE/Alu	(7)	303	1	4392632
747	34.5	5.2	2.5	chrX	38336011	38336441	(117704454)	C	LTR33	LTR/ERVL	(2)	513	71	4418795
20	11.3	0.0	0.0	chrX	38336507	38336546	(117704349)	+	(A)n	Simple_repeat	1	40	(0)	4418796
11	25.1	1.8	5.2	chrX	40153892	40153948	(115886947)	+	G-rich	Low_complexity	1	58	(0)	4421858
16	3.6	6.5	3.0	chrX	40154110	40154140	(115886755)	+	(AAT)n	Simple_repeat	1	33	(0)	4421859
18	17.9	0.0	4.2	chrX	40154221	40154268	(115886627)	+	(CTCCC)n	Simple_repeat	1	48	(0)	4421860
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
17345	11.8	3.2	1.0	chrX	57103441	57106236	(98934659)	+	HERVK3-int	LTR/ERVK	10	2869	(4333)	4448812
2953	20.9	9.4	1.6	chrX	93677500	93678375	(62362520)	C	L1ME1	LINE/L1	(82)	6097	5166	4485924
4352	14.4	2.0	0.4	chrX	103757039	103757736	(52283159)	C	MER50	LTR/ERV1	(25)	709	1	4499122
7888	8.0	0.5	0.1	chrX	104724891	104726778	(51314117)	C	L1PA7	LINE/L1	(4)	6150	4256	4500601
2336	7.2	1.4	0.0	chrX	118002315	118002593	(38038302)	+	AluSp	SINE/Alu	1	283	(30)	4518406
57	0.0	0.0	0.0	chrX	118002596	118002646	(38038249)	+	(AAAT)n	Simple_repeat	1	51	(0)	4518407
757	22.9	10.7	1.4	chrX	118002749	118002969	(38037926)	C	MamTip1	DNA/hAT-Tip100	(21)	246	3	4518408
2824	0.7	0.3	0.7	chrX	138828288	138828588	(17212307)	+	AluY	SINE/Alu	1	300	(11)	4549777
840	33.7	13.8	3.0	chrX	151771239	151771929	(4268966)	+	L3	LINE/CR1	3095	3871	(228)	4568094
16	4.5	0.0	0.0	chrX	151772153	151772175	(4268720)	+	(TCAT)n	Simple_repeat	1	23	(0)	4568096
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
294	21.8	0.0	0.0	chrY	11024506	11024560	(46202855)	C	AluYj4	SINE/Alu	(33)	278	224	4588731
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057