16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
394	28.7	0.0	1.5	chr1	2940304	2940434	(246015988)	+	HAL1	LINE/L1	1626	1754	(753)	3598
460	28.3	22.6	2.1	chr1	2940595	2940922	(246015500)	C	HAL1	LINE/L1	(82)	2425	2011	3599
1113	27.9	8.9	1.1	chr1	2941141	2941603	(246014819)	C	HAL1	LINE/L1	(668)	1839	1337	3599
2092	6.2	7.4	0.0	chr1	6205477	6205750	(242750672)	C	AluSz	SINE/Alu	(16)	296	1	7832
1136	9.2	0.0	0.0	chr1	6413775	6413915	(242542507)	C	AluSz	SINE/Alu	(169)	143	3	8188
34	0.0	0.0	0.0	chr1	6413950	6413981	(242542441)	+	(TGTTT)n	Simple_repeat	1	32	(0)	8189
2242	9.7	0.0	0.0	chr1	6413982	6414260	(242542162)	C	AluSx4	SINE/Alu	(31)	279	1	8190
46	2.3	0.0	0.0	chr1	8701288	8701331	(240255091)	+	(AC)n	Simple_repeat	1	44	(0)	12083
33	3.1	0.0	0.0	chr1	12433918	12433950	(236522472)	+	(GA)n	Simple_repeat	1	33	(0)	19789
18	0.0	0.0	0.0	chr1	12433951	12433970	(236522452)	+	(TG)n	Simple_repeat	1	20	(0)	19790
14	0.0	0.0	0.0	chr1	12433970	12433987	(236522435)	+	(GGA)n	Simple_repeat	1	18	(0)	19791
2494	8.4	0.0	0.0	chr1	15630834	15631142	(233325280)	C	AluY	SINE/Alu	(2)	309	1	25710
2325	7.1	1.4	0.3	chr1	15836483	15836777	(233119645)	C	AluSx1	SINE/Alu	(13)	299	2	26171
44	32.8	0.0	0.0	chr1	16111915	16112057	(232844365)	+	(CA)n	Simple_repeat	1	143	(0)	26714
66	36.3	1.2	2.0	chr1	16157360	16157506	(232798916)	+	(TG)n	Simple_repeat	1	147	(0)	26801
2113	10.6	1.3	2.0	chr1	16157507	16157808	(232798614)	+	AluSz	SINE/Alu	1	300	(12)	26802
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
42	0.0	0.0	0.0	chr1	21345885	21345920	(227610502)	+	(TG)n	Simple_repeat	1	36	(0)	37718
20	0.0	0.0	0.0	chr1	21345921	21345942	(227610480)	+	(CG)n	Simple_repeat	1	22	(0)	37719
1311	22.1	22.6	4.6	chr1	24562619	24563178	(224393244)	+	L1MEh	LINE/L1	263	932	(1303)	45171
2424	8.9	0.3	0.3	chr1	24563240	24563552	(224392870)	+	AluSp	SINE/Alu	1	313	(0)	45172
16	0.0	0.0	4.2	chr1	25906067	25906090	(223050332)	+	(AGGG)n	Simple_repeat	1	24	(0)	48069
2144	9.8	0.0	7.9	chr1	27116078	27116395	(221840027)	+	AluSx1	SINE/Alu	1	293	(19)	50963
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
12	20.7	5.1	0.0	chr1	28553062	28553100	(220403322)	+	(GCCCC)n	Simple_repeat	1	41	(0)	54505
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
60	1.8	0.0	0.0	chr1	30801414	30801469	(218154953)	+	(AC)n	Simple_repeat	1	56	(0)	59103
501	34.1	8.2	5.4	chr1	30824919	30825613	(218130809)	C	L2c	LINE/L2	(0)	3387	2660	59163
46	9.7	0.0	0.0	chr1	33364360	33364425	(215591997)	+	(AC)n	Simple_repeat	1	66	(0)	64973
34	0.0	0.0	0.0	chr1	40374597	40374625	(208581797)	+	(GT)n	Simple_repeat	1	29	(0)	78696
16	9.4	10.6	1.9	chr1	40374626	40374672	(208581750)	+	GA-rich	Low_complexity	1	52	(0)	78697
38	2.8	0.0	0.0	chr1	44031167	44031203	(204925219)	+	(CA)n	Simple_repeat	1	37	(0)	85306
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
715	30.4	11.3	2.7	chr1	44774894	44775336	(204181086)	+	L2	LINE/L2	2258	2743	(676)	86676
1062	32.0	14.6	6.6	chr1	45875459	45876481	(203079941)	C	L2b	LINE/L2	(575)	2844	1710	88950
15	10.4	0.0	5.7	chr1	46302681	46302715	(202653707)	+	(CCTGG)n	Simple_repeat	1	35	(0)	89753
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
313	30.4	19.4	3.9	chr1	91500001	91500411	(157456011)	+	L2a	LINE/L2	2919	3408	(18)	162812
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
22	0.0	0.0	0.0	chr1	115641538	115641561	(133314861)	+	(TG)n	Simple_repeat	1	24	(0)	198478
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
637	2.8	0.0	0.0	chr1	146038044	146038115	(102918307)	+	tRNA-His-CAY_	tRNA	1	72	(3)	211993
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
22	3.8	0.0	0.0	chr1	151941277	151941303	(97015119)	+	(CT)n	Simple_repeat	1	27	(0)	222159
23	7.2	0.0	0.0	chr1	151941303	151941332	(97015090)	+	(CA)n	Simple_repeat	1	30	(0)	222160
47	4.3	0.0	0.0	chr1	151941390	151941438	(97014984)	+	(AC)n	Simple_repeat	1	49	(0)	222161
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
2378	8.3	1.0	0.0	chr1	154998728	154999029	(93957393)	C	AluSp	SINE/Alu	(7)	306	2	227184
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
231	28.1	15.1	1.0	chr1	156457093	156457189	(92499233)	C	L2c	LINE/L2	(14)	3373	3261	230180
42	0.0	0.0	0.0	chr1	156661556	156661591	(92294831)	+	(GT)n	Simple_repeat	1	36	(0)	230533
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
660	0.0	0.0	0.0	chr1	161531113	161531184	(87425238)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	237673
12	10.0	0.0	0.0	chr1	161531389	161531410	(87425012)	+	(TTCC)n	Simple_repeat	1	22	(0)	237674
1949	16.9	5.5	1.4	chr1	167984837	167985184	(80971238)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	247637
54	0.0	3.8	0.0	chr1	167985185	167985237	(80971185)	+	(GT)n	Simple_repeat	1	55	(0)	247638
2046	21.0	5.9	4.4	chr1	167985253	167985705	(80970717)	C	MLT1D	LTR/ERVL-MaLR	(45)	460	1	247639
399	31.0	15.4	5.1	chr1	181127263	181127459	(67828963)	C	MIRb	SINE/MIR	(22)	246	26	267516
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
1315	22.9	17.0	2.3	chr1	183045320	183046170	(65910252)	C	L1ME3F	LINE/L1	(180)	6063	5078	270485
13	15.1	5.1	2.4	chr1	183471444	183471500	(65484922)	+	(CGCC)n	Simple_repeat	1	58	(0)	271187
41	4.1	1.9	1.9	chr1	184386769	184386820	(64569602)	+	(AC)n	Simple_repeat	1	53	(0)	272566
46	12.3	0.0	0.0	chr1	203306796	203306875	(45649547)	+	(AC)n	Simple_repeat	1	80	(0)	299386
157	21.5	5.7	1.0	chr1	208149145	208149602	(40806820)	+	(TG)n	Simple_repeat	1	484	(0)	307680
338	16.7	3.0	17.9	chr1	223709935	223709998	(25246424)	C	LTR37A	LTR/ERV1	(288)	138	81	331082
1991	13.1	1.0	3.2	chr1	223709999	223710310	(25246112)	+	AluSx	SINE/Alu	7	311	(1)	331084
338	16.7	3.0	17.9	chr1	223710311	223710362	(25246060)	C	LTR37A	LTR/ERV1	(346)	80	40	331082
1027	22.6	0.9	6.1	chr1	223710363	223710423	(25245999)	C	MER20	DNA/hAT-Charlie	(0)	219	161	331085
2731	15.6	6.6	9.5	chr1	223710424	223711053	(25245369)	+	MER4B	LTR/ERV1	1	610	(0)	331086
204	35.4	9.4	5.9	chr1	223776162	223776314	(25180108)	+	L3	LINE/CR1	2586	2744	(1355)	331199
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
548	17.8	0.7	8.2	chr1	224204421	224204521	(24751901)	C	L1MB2	LINE/L1	(48)	6123	6029	332034
32	21.7	0.0	0.0	chr1	224204522	224204586	(24751836)	+	A-rich	Low_complexity	1	65	(0)	332036
512	15.6	5.0	0.0	chr1	224204589	224204684	(24751738)	C	L1MB2	LINE/L1	(130)	6041	5941	332034
35	2.5	2.4	0.0	chr1	224204729	224204769	(24751653)	+	(CAATATATTC)n	Simple_repeat	1	42	(0)	332037
1288	12.1	9.6	0.5	chr1	224219286	224219484	(24736938)	C	AluSz6	SINE/Alu	(9)	303	85	332076
2087	11.4	0.0	0.0	chr1	225442582	225442853	(23513569)	+	AluSx3	SINE/Alu	13	284	(27)	333980
56	0.0	0.0	0.0	chr1	225442854	225442901	(23513521)	+	(AC)n	Simple_repeat	1	48	(0)	333981
474	30.8	10.3	0.8	chr1	226050234	226050488	(22905934)	+	MamRTE1	LINE/RTE-BovB	3459	3740	(72)	335099
1076	6.4	0.0	0.0	chr1	226076173	226076297	(22880125)	+	AluSq	SINE/Alu	166	290	(23)	335146
1160	10.0	0.7	0.0	chr1	226076302	226076451	(22879971)	C	AluSx	SINE/Alu	(161)	151	1	335147
101	17.2	2.9	3.2	chr1	226654890	226655132	(22301290)	+	GA-rich	Low_complexity	1	250	(0)	336241
53	0.0	0.0	0.0	chr1	227432088	227432132	(21524290)	+	(AC)n	Simple_repeat	1	45	(0)	337504
1007	11.8	0.7	0.0	chr1	227432310	227432444	(21523978)	+	AluJr4	SINE/Alu	1	136	(176)	337505
39	17.3	3.9	2.8	chr1	227915636	227915738	(21040684)	+	(CCT)n	Simple_repeat	1	107	(0)	338053
34	0.0	0.0	0.0	chr1	228458656	228458684	(20497738)	+	(GT)n	Simple_repeat	1	29	(0)	338742
2252	9.1	0.0	0.3	chr1	228458853	228459160	(20497262)	C	AluSc	SINE/Alu	(2)	307	1	338743
1394	20.8	10.3	8.5	chr1	228491021	228491105	(20465317)	C	MER34	LTR/ERV1	(0)	542	458	338802
1999	12.0	11.3	3.9	chr1	229218445	229218826	(19737596)	C	LTR24C	LTR/ERV1	(1)	634	221	339879
29	19.7	0.0	4.0	chr1	229218911	229218986	(19737436)	+	(TTTC)n	Simple_repeat	1	76	(0)	339880
181	36.4	5.7	1.5	chr1	233241942	233242008	(15714414)	C	Tigger19b	DNA/TcMar-Tigger	(329)	221	152	346088
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
20	12.4	2.9	0.0	chr1	234618743	234618777	(14337645)	+	(AC)n	Simple_repeat	1	36	(0)	348178
2098	27.4	8.7	4.4	chr1	234681446	234682399	(14274023)	C	L2a	LINE/L2	(2349)	1070	72	348271
660	26.4	3.6	5.9	chr1	234718245	234718336	(14238086)	+	CR1-12_AMi	LINE/CR1	75	161	(453)	348330
44	0.0	0.0	0.0	chr1	234718337	234718374	(14238048)	+	(TG)n	Simple_repeat	1	38	(0)	348331
660	26.4	3.6	5.9	chr1	234718375	234718652	(14237770)	+	CR1-12_AMi	LINE/CR1	162	436	(178)	348330
46	0.0	0.0	0.0	chr1	234723720	234723758	(14232664)	+	(TG)n	Simple_repeat	1	39	(0)	348334
2186	12.0	0.3	1.0	chr1	234916475	234916774	(14039648)	+	AluSx1	SINE/Alu	1	298	(14)	348658
56	0.0	0.0	0.0	chr1	235104825	235104872	(13851550)	+	(AC)n	Simple_repeat	1	48	(0)	349042
16	14.3	0.0	6.8	chr1	236281579	236281622	(12674800)	+	(GGCCC)n	Simple_repeat	1	44	(0)	351303
2150	12.9	0.0	0.0	chr1	236305459	236305753	(12650669)	+	AluSx1	SINE/Alu	6	300	(12)	351351
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
2018	13.2	0.0	5.0	chr1	236481482	236481799	(12474623)	+	AluJb	SINE/Alu	2	303	(9)	351735
272	30.1	15.8	0.0	chr1	237005604	237005736	(11950686)	+	L2a	LINE/L2	3269	3426	(0)	352629
34	3.0	0.0	0.0	chr1	237005748	237005781	(11950641)	+	(AC)n	Simple_repeat	1	34	(0)	352630
2523	8.8	1.6	0.3	chr1	237152644	237153007	(11803415)	+	L1PA10	LINE/L1	4978	5346	(800)	352843
544	27.0	6.9	3.0	chr1	244214857	244215043	(4741379)	+	MIRb	SINE/MIR	1	208	(60)	363752
44	0.0	0.0	0.0	chr10	5554771	5554808	(128242614)	+	(AC)n	Simple_repeat	1	38	(0)	377917
20	13.7	0.0	0.0	chr10	5554809	5554840	(128242582)	+	(TC)n	Simple_repeat	1	32	(0)	377918
684	12.4	8.9	0.0	chr10	5853576	5853688	(127943734)	C	AluYh3a3	SINE/Alu	(14)	278	155	378444
666	2.7	0.0	0.0	chr10	5853711	5853783	(127943639)	C	tRNA-Val-GTA	tRNA	(3)	73	1	378445
2143	12.5	0.0	1.0	chr10	5853825	5854113	(127943309)	+	AluSx	SINE/Alu	1	286	(26)	378446
36	18.8	3.6	4.4	chr10	8332863	8332983	(125464439)	+	(TTTCT)n	Simple_repeat	1	120	(0)	382541
21	16.8	0.0	0.0	chr10	8332954	8332995	(125464427)	+	(CCTCC)n	Simple_repeat	1	42	(0)	382542
79	0.0	0.0	0.0	chr10	8332996	8333065	(125464357)	+	(CTCTT)n	Simple_repeat	1	70	(0)	382543
2387	10.1	0.0	4.7	chr10	10728158	10728474	(123068948)	+	AluSg	SINE/Alu	1	302	(8)	386002
274	30.6	16.1	6.4	chr10	10728475	10728519	(123068903)	C	L2c	LINE/L2	(322)	3065	3021	386001
685	21.6	14.8	3.5	chr10	13816299	13816495	(119980927)	+	MLT1I	LTR/ERVL-MaLR	189	411	(0)	391412
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
307	33.2	4.7	11.2	chr10	15813203	15813686	(117983736)	+	L2a	LINE/L2	2920	3425	(1)	394839
25	9.4	0.0	0.0	chr10	15813979	15814013	(117983409)	+	(A)n	Simple_repeat	1	35	(0)	394840
13	8.7	4.0	0.0	chr10	21725061	21725085	(112072337)	+	(AAAAC)n	Simple_repeat	1	26	(0)	404247
2423	27.1	8.7	2.1	chr10	21829652	21831056	(111966366)	C	L1MB4	LINE/L1	(3940)	2460	931	404394
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
15	22.0	0.0	5.7	chr10	25934809	25934861	(107862561)	+	G-rich	Low_complexity	1	53	(0)	410940
500	33.8	9.1	2.7	chr10	29258142	29258584	(104538838)	+	L1ME4a	LINE/L1	4672	5131	(1015)	416577
51	0.0	0.0	0.0	chr10	29258623	29258666	(104538756)	+	(CA)n	Simple_repeat	1	44	(0)	416578
21	0.0	3.9	0.0	chr10	29258667	29258692	(104538730)	+	(GA)n	Simple_repeat	1	27	(0)	416579
481	30.0	4.6	8.7	chr10	29258693	29258811	(104538611)	+	L1ME4a	LINE/L1	5316	5430	(694)	416577
1670	19.0	0.3	1.4	chr10	29258812	29259095	(104538327)	+	AluJo	SINE/Alu	2	282	(30)	416580
11	27.7	0.0	2.2	chr10	47024809	47024853	(86772569)	+	(GTGTGG)n	Simple_repeat	1	45	(0)	438600
16	9.1	2.6	5.0	chr10	50623872	50623910	(83173512)	+	(CCCGCCG)n	Simple_repeat	1	40	(0)	443660
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
2241	9.0	1.7	0.0	chr10	68798706	68798995	(64998427)	+	AluSg7	SINE/Alu	2	296	(13)	470164
489	23.7	7.8	0.0	chr10	69758388	69758505	(64038917)	+	MIRb	SINE/MIR	54	181	(87)	472205
1737	16.1	1.0	1.3	chr10	71888105	71888414	(61909008)	+	AluJo	SINE/Alu	4	312	(0)	476113
21	27.8	2.4	2.4	chr10	71888416	71888498	(61908924)	+	GA-rich	Low_complexity	1	85	(0)	476114
319	25.4	4.5	4.7	chr10	71888523	71888752	(61908670)	C	L1ME3B	LINE/L1	(60)	6182	5932	476115
22	10.4	0.0	0.0	chr10	72229213	72229244	(61568178)	+	(T)n	Simple_repeat	1	32	(0)	476819
1075	17.2	10.6	17.6	chr10	74032266	74032415	(59765007)	+	L1MB8	LINE/L1	5136	5288	(858)	480436
2271	11.2	0.0	0.7	chr10	74032416	74032710	(59764712)	+	AluSx	SINE/Alu	1	293	(19)	480439
11	28.5	4.3	5.1	chr10	75111911	75112004	(58685418)	+	G-rich	Low_complexity	1	98	(0)	482445
355	27.9	7.3	5.9	chr10	75498523	75498758	(58298664)	+	CR1-L3A_Croc	LINE/CR1	3735	3886	(402)	483193
2377	15.2	7.4	0.9	chr10	87585968	87586432	(46210990)	C	LTR44	LTR/ERV1	(3)	516	19	501500
708	27.6	4.2	1.0	chr10	88093182	88093386	(45704036)	+	MIRb	SINE/MIR	9	220	(48)	502314
55	3.7	0.0	0.0	chr10	91609148	91609203	(42188219)	+	(TC)n	Simple_repeat	1	56	(0)	507574
35	12.3	0.0	0.0	chr10	91609204	91609249	(42188173)	+	(AC)n	Simple_repeat	1	46	(0)	507575
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
360	29.6	4.3	4.9	chr10	97889949	97890090	(35907332)	+	L1ME4b	LINE/L1	476	616	(276)	518963
33	0.0	0.0	0.0	chr10	97890091	97890118	(35907304)	+	(AC)n	Simple_repeat	1	28	(0)	518964
1786	16.0	3.2	0.4	chr10	97890134	97890408	(35907014)	C	AluJr	SINE/Alu	(29)	283	1	518965
338	20.0	1.5	0.0	chr10	99623962	99624026	(34173396)	C	MER5A1	DNA/hAT-Charlie	(32)	134	69	521821
83	17.2	2.3	1.7	chr10	99624027	99624202	(34173220)	+	(TCCT)n	Simple_repeat	1	180	(0)	521822
251	35.7	8.4	4.8	chr10	99624206	99624261	(34173161)	+	SVA_A	Retroposon/SVA	2	214	(1172)	521823
822	18.1	0.0	0.7	chr10	99624262	99624410	(34173012)	C	FLAM_C	SINE/Alu	(87)	215	6	521824
19	30.2	1.6	0.0	chr10	100668556	100668616	(33128806)	+	(CA)n	Simple_repeat	1	62	(0)	523763
50	0.0	0.0	0.0	chr10	100668625	100668667	(33128755)	+	(AC)n	Simple_repeat	1	43	(0)	523764
17	26.0	6.7	1.1	chr10	100730295	100730383	(33067039)	+	(TTCTCC)n	Simple_repeat	1	95	(0)	523888
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
21	4.0	0.0	0.0	chr10	101442263	101442288	(32355134)	+	(TC)n	Simple_repeat	1	26	(0)	525127
31	3.3	0.0	0.0	chr10	101442289	101442319	(32355103)	+	(TG)n	Simple_repeat	1	31	(0)	525128
12	31.0	3.1	1.5	chr10	102504666	102504730	(31292692)	+	(GGCGA)n	Simple_repeat	1	67	(0)	527057
47	0.0	2.3	0.0	chr10	113678604	113678647	(20118775)	+	(GT)n	Simple_repeat	1	45	(0)	544716
731	25.1	7.1	2.8	chr10	121497385	121497667	(12299755)	C	L1ME3Cz	LINE/L1	(314)	683	388	557259
1091	20.3	1.9	0.5	chr10	121497673	121497885	(12299537)	+	MER58A	DNA/hAT-Charlie	3	218	(6)	557260
249	23.5	4.7	1.2	chr10	121497892	121497973	(12299449)	C	L1ME3Cz	LINE/L1	(606)	391	307	557259
669	29.3	5.4	3.9	chr10	132905381	132905710	(891712)	C	HAL1	LINE/L1	(699)	1808	1474	572034
2326	25.2	7.4	4.6	chr11	2828819	2829812	(132256810)	+	HAL1	LINE/L1	1392	2415	(92)	576192
224	30.1	7.2	2.8	chr11	3052263	3052368	(132034254)	+	MIRb	SINE/MIR	131	241	(27)	576493
600	28.1	8.7	0.5	chr11	8727748	8727947	(126358675)	C	MamRep137	DNA/TcMar-Tigger	(0)	510	293	584391
53	2.0	0.0	0.0	chr11	8727959	8728008	(126358614)	+	(AC)n	Simple_repeat	1	50	(0)	584392
1877	15.7	1.0	0.3	chr11	8728014	8728300	(126358322)	C	AluJr	SINE/Alu	(21)	291	3	584393
2289	22.0	6.2	13.2	chr11	9219030	9219713	(125866909)	+	HAL1	LINE/L1	1177	1873	(634)	585205
1130	22.2	5.2	0.4	chr11	35868489	35868746	(99217876)	+	HAL1	LINE/L1	1524	1794	(713)	627465
649	28.3	4.8	2.4	chr11	35868739	35868984	(99217638)	+	HAL1	LINE/L1	1718	1969	(538)	627468
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	18.7	0.0	5.0	chr11	62855797	62855836	(72230786)	+	A-rich	Low_complexity	1	40	(0)	662962
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
491	28.5	4.8	3.2	chr11	86592853	86593037	(48493585)	+	MIRb	SINE/MIR	2	189	(79)	705799
249	27.7	1.2	3.5	chr11	110480058	110480143	(24606479)	C	MLT1J1	LTR/ERVL-MaLR	(20)	424	341	739911
56	25.3	2.7	4.4	chr11	120182721	120182939	(14903683)	+	GA-rich	Low_complexity	1	225	(0)	756096
71	20.8	0.0	0.7	chr11	120347119	120347265	(14739357)	+	(CTTT)n	Simple_repeat	1	147	(0)	756404
43	0.0	0.0	0.0	chr11	120347271	120347307	(14739315)	+	(TG)n	Simple_repeat	1	37	(0)	756405
876	27.0	6.6	3.7	chr11	121593302	121593655	(13492967)	C	HAL1	LINE/L1	(452)	2055	1691	758348
4405	26.6	9.5	3.3	chr11	121593718	121595496	(13491126)	C	HAL1	LINE/L1	(606)	1901	1	758349
256	32.8	11.8	0.0	chr11	123234920	123235114	(11851508)	+	MIRc	SINE/MIR	33	253	(15)	761142
212	18.9	4.1	0.9	chr12	401991	402062	(132873247)	+	MIR3	SINE/MIR	113	189	(73)	778681
2469	10.0	0.3	0.0	chr12	755695	756003	(132519306)	+	AluSg	SINE/Alu	1	310	(0)	779407
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
31	0.0	0.0	0.0	chr12	1924796	1924829	(131350480)	+	(GT)n	Simple_repeat	1	34	(0)	781437
50	2.2	0.0	0.0	chr12	1924830	1924876	(131350433)	+	(GA)n	Simple_repeat	1	47	(0)	781438
13	22.4	0.0	4.4	chr12	31324752	31324796	(101950513)	+	(CCGGACC)n	Simple_repeat	1	45	(0)	825004
46	4.1	0.0	0.0	chr12	31636903	31636953	(101638356)	+	(TTGG)n	Simple_repeat	1	51	(0)	825692
2188	9.3	0.7	0.0	chr12	31636954	31637232	(101638077)	C	AluSx1	SINE/Alu	(31)	281	1	825693
414	28.8	12.8	5.3	chr12	39912969	39913551	(93361758)	+	L1MEh	LINE/L1	1585	2217	(18)	833041
35	22.2	7.7	0.0	chr12	46383575	46383704	(86891605)	+	GA-rich	Low_complexity	1	140	(0)	842184
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
13	32.8	6.9	0.9	chr12	54003877	54003977	(79271332)	+	GA-rich	Low_complexity	1	108	(0)	855744
12	25.1	0.0	4.3	chr12	54358797	54358842	(78916467)	+	(CCTT)n	Simple_repeat	1	46	(0)	856315
2631	5.5	0.0	0.6	chr12	55829165	55829476	(77445833)	+	AluSx4	SINE/Alu	1	310	(0)	858321
2059	11.8	1.8	0.0	chr12	56115862	56116141	(77159168)	+	AluSz	SINE/Alu	1	285	(27)	858935
90	1.2	0.0	1.1	chr12	56116142	56116229	(77159080)	+	(AAAG)n	Simple_repeat	1	88	(0)	858936
2139	7.5	4.0	2.0	chr12	56157114	56157406	(77117903)	+	AluSq2	SINE/Alu	2	300	(13)	858992
606	5.6	0.0	0.0	chr12	56190369	56190439	(77084870)	+	tRNA-Ser-TCG	tRNA	6	76	(9)	859050
37	0.0	0.0	0.0	chr12	57112147	57112178	(76163131)	+	(AC)n	Simple_repeat	1	32	(0)	860716
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
239	27.4	1.4	4.0	chr12	57245298	57245373	(76029936)	C	Plat_L3	LINE/CR1	(1)	3604	3521	860888
2399	6.1	0.7	0.0	chr12	57245376	57245669	(76029640)	C	AluY	SINE/Alu	(15)	296	1	860889
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
2142	14.8	0.0	0.0	chr12	70389413	70389716	(62885593)	+	AluJb	SINE/Alu	2	305	(7)	880823
660	23.3	1.9	0.5	chr12	70389792	70389965	(62885344)	C	L1M6	LINE/L1	(721)	2040	1737	880822
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
2269	8.8	0.0	1.0	chr12	110512971	110513267	(22762042)	C	AluY	SINE/Alu	(17)	294	1	944911
193	19.0	0.8	1.0	chr12	116595654	116596045	(16679264)	+	(TGGA)n	Simple_repeat	1	395	(0)	958474
13	14.0	4.7	4.4	chr12	120091574	120091616	(13183693)	+	G-rich	Low_complexity	1	45	(0)	966214
517	13.3	5.1	0.0	chr12	120292742	120292816	(12982493)	+	AluYe5	SINE/Alu	212	290	(20)	966633
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
2073	17.9	5.0	6.0	chr12	120293603	120294001	(12981308)	C	L1MB3	LINE/L1	(0)	6183	5782	966635
748	26.2	2.3	6.2	chr12	120647210	120647386	(12627923)	C	MIRb	SINE/MIR	(24)	244	73	967589
825	8.7	6.8	2.4	chr12	120647387	120647513	(12627796)	C	FLAM_C	SINE/Alu	(10)	133	1	967590
377	23.5	12.6	2.4	chr12	121771849	121772018	(11503291)	+	L1ME4b	LINE/L1	685	874	(18)	970299
48	6.8	8.2	1.9	chr12	121772019	121772116	(11503193)	+	(TTCT)n	Simple_repeat	1	106	(0)	970300
2194	13.0	0.0	0.7	chr12	121772118	121772424	(11502885)	C	AluSx3	SINE/Alu	(1)	310	6	970301
8189	4.3	0.7	1.4	chr12	132252897	132253722	(1021587)	C	LTR13A	LTR/ERVK	(133)	833	1	989261
234	27.7	0.0	6.0	chr12	132253723	132253747	(1021562)	+	Tigger15a	DNA/TcMar-Tigger	615	635	(80)	989260
276	23.9	0.0	2.7	chr12	132253905	132253977	(1021332)	C	MER58A	DNA/hAT-Charlie	(122)	102	32	989263
2026	11.7	4.3	0.3	chr12	132254019	132254309	(1021000)	C	AluSq2	SINE/Alu	(10)	303	1	989264
1326	25.4	13.6	3.0	chr13	30352875	30353686	(84010642)	+	HAL1	LINE/L1	579	2172	(335)	1009520
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
10189	13.9	5.7	3.4	chr13	43056899	43059152	(71305176)	C	L1PB1	LINE/L1	(4349)	2514	3	1028332
17	15.4	0.0	2.6	chr13	43127603	43127640	(71236688)	+	(CCCTCT)n	Simple_repeat	1	38	(0)	1028455
41	32.8	0.5	3.5	chr13	43127848	43128044	(71236284)	+	(TCTC)n	Simple_repeat	1	198	(0)	1028456
2160	10.6	0.3	0.0	chr13	45414336	45414619	(68949709)	+	AluSq	SINE/Alu	1	285	(28)	1032238
56	2.0	0.0	0.0	chr13	45414620	45414671	(68949657)	+	(AC)n	Simple_repeat	1	52	(0)	1032239
33	16.2	3.1	0.0	chr13	50522161	50522224	(63842104)	+	GA-rich	Low_complexity	1	66	(0)	1040250
13	6.5	12.1	0.0	chr13	51452737	51452769	(62911559)	+	(CCTG)n	Simple_repeat	1	37	(0)	1041602
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
292	34.6	2.7	0.0	chr13	98507461	98507567	(15856761)	+	MIR3	SINE/MIR	98	207	(1)	1104738
2302	9.0	0.3	0.3	chr13	99699109	99699408	(14664920)	+	AluSp	SINE/Alu	6	305	(8)	1106684
2383	8.7	0.0	0.3	chr13	99699412	99699709	(14664619)	+	AluSg	SINE/Alu	1	297	(13)	1106685
535	30.6	3.9	5.5	chr13	100238451	100238685	(14125643)	+	Tigger16a	DNA/TcMar-Tigger	395	625	(332)	1107648
326	35.6	13.2	3.3	chr13	112849679	112849861	(1514467)	C	L2c	LINE/L2	(0)	3387	3172	1123991
2325	10.7	6.6	0.8	chr13	113157676	113158034	(1206294)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1124259
556	25.8	5.6	0.0	chr13	113158054	113158204	(1206124)	+	MER58A	DNA/hAT-Charlie	8	167	(57)	1124260
28	25.2	2.2	2.1	chr13	113158216	113158306	(1206022)	+	(CTCC)n	Simple_repeat	1	93	(0)	1124261
852	24.8	3.2	0.4	chr13	113921862	113922100	(442228)	C	HAL1	LINE/L1	(698)	1809	1564	1125125
105	25.5	1.7	2.3	chr13	114134039	114134339	(229989)	+	(CA)n	Simple_repeat	1	306	(0)	1125268
643	0.0	0.0	0.0	chr14	20609336	20609407	(86434311)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1128336
722	0.0	0.0	0.0	chr14	20610132	20610213	(86433505)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1128337
740	0.0	0.0	0.0	chr14	20625370	20625451	(86418267)	+	tRNA-Leu-CTA_	tRNA	1	82	(3)	1128366
563	0.0	0.0	18.0	chr14	20683273	20683361	(86360357)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	1128459
13	15.3	1.9	9.3	chr14	22886399	22886451	(84157267)	+	(CTCCTT)n	Simple_repeat	1	54	(0)	1131898
334	27.2	7.1	10.1	chr14	34539085	34539301	(72504417)	C	MIRc	SINE/MIR	(6)	262	53	1148041
2579	9.7	0.0	0.3	chr14	55547151	55547458	(51496260)	+	AluSx1	SINE/Alu	2	308	(4)	1177902
1738	7.8	0.0	5.0	chr14	55599464	55599721	(51443997)	C	AluSx1	SINE/Alu	(11)	301	57	1178001
483	32.9	4.7	6.2	chr14	69716324	69716582	(37327136)	C	MIR	SINE/MIR	(8)	260	6	1200063
663	15.4	0.0	13.4	chr14	72962348	72962496	(34081222)	+	AluJo	SINE/Alu	1	129	(183)	1205165
16	12.6	0.0	0.0	chr14	72962497	72962521	(34081197)	+	(CA)n	Simple_repeat	1	25	(0)	1205166
1964	8.0	5.1	1.5	chr14	72962522	72962784	(34080934)	C	AluSx1	SINE/Alu	(39)	273	1	1205167
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
15	21.9	0.0	6.7	chr14	90397289	90397295	(16646423)	+	(TTTTTTG)n	Simple_repeat	1	13	(47)	1233835
16	3.4	6.2	2.9	chr14	90397296	90397327	(16646391)	+	(TTGT)n	Simple_repeat	1	34	(0)	1233836
15	21.9	0.0	6.7	chr14	90397328	90397348	(16646370)	+	(TTTTTTG)n	Simple_repeat	14	60	(0)	1233835
329	25.0	5.6	0.0	chr14	93860263	93860346	(13183372)	C	MIRb	SINE/MIR	(61)	207	119	1240154
225	29.5	3.9	1.6	chr14	95291821	95291944	(11751774)	+	L1ME4a	LINE/L1	5787	5913	(211)	1242733
481	30.3	3.9	2.8	chr14	95291965	95292144	(11751574)	C	MIR	SINE/MIR	(3)	259	78	1242734
332	26.6	15.8	0.0	chr14	95292186	95292324	(11751394)	+	L1ME4a	LINE/L1	5954	6118	(6)	1242733
43	30.5	2.0	1.3	chr14	98914067	98914266	(8129452)	+	A-rich	Low_complexity	1	201	(0)	1249180
34	43.5	0.5	0.0	chr14	99562725	99562916	(7480802)	+	(CA)n	Simple_repeat	1	193	(0)	1250206
1100	15.0	0.0	0.6	chr14	101763215	101763381	(5280337)	C	AluSc8	SINE/Alu	(7)	304	139	1253614
2282	8.3	1.4	0.0	chr14	101763388	101763676	(5280042)	C	AluSx1	SINE/Alu	(15)	297	5	1253615
11	25.5	0.0	6.9	chr14	102592248	102592305	(4451413)	+	G-rich	Low_complexity	1	58	(0)	1255258
14	13.0	9.5	0.0	chr14	102592422	102592463	(4451255)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1255259
29	0.0	0.0	0.0	chr14	103105359	103105383	(3938335)	+	(TG)n	Simple_repeat	1	25	(0)	1256205
146	24.8	0.0	0.0	chr14	104979743	104980078	(2063640)	+	(AC)n	Simple_repeat	1	336	(0)	1259050
14	15.1	9.4	1.7	chr14	104980125	104980177	(2063541)	+	(CAGACA)n	Simple_repeat	1	58	(0)	1259051
426	27.7	14.2	0.6	chr14	105331834	105332156	(1711562)	C	L1MEd	LINE/L1	(5509)	1577	1204	1259545
33	7.5	0.0	0.0	chr15	40092435	40092476	(61898713)	+	(AC)n	Simple_repeat	1	42	(0)	1290671
12	22.6	2.3	2.3	chr15	40092604	40092646	(61898543)	+	A-rich	Low_complexity	1	44	(0)	1290672
656	5.5	4.2	0.0	chr15	52090137	52090227	(49900962)	+	L1PB1	LINE/L1	6056	6150	(1)	1310698
4513	25.3	6.8	7.5	chr15	52090228	52091033	(49900156)	+	HAL1	LINE/L1	1599	2372	(135)	1310697
2334	10.5	0.0	2.0	chr15	58755773	58756077	(43235112)	C	AluSz	SINE/Alu	(12)	300	2	1320732
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
638	4.0	0.0	0.0	chr15	65869059	65869133	(36122056)	C	tRNA-Gln-CAG	tRNA	(0)	75	1	1333537
1904	16.4	1.7	0.0	chr15	66817836	66818128	(35173061)	C	AluJb	SINE/Alu	(13)	299	2	1335507
2343	9.6	0.0	0.0	chr15	66818138	66818428	(35172761)	C	AluY	SINE/Alu	(20)	291	1	1335508
367	29.5	7.3	1.2	chr15	67792971	67793138	(34198051)	C	Tigger15a	DNA/TcMar-Tigger	(19)	696	518	1337142
378	29.7	5.6	2.9	chr15	68619148	68619355	(33371834)	+	L4_A_Mam	LINE/RTE-X	4741	4954	(36)	1338683
680	25.7	5.1	4.5	chr15	68621659	68621764	(33369425)	+	MIRb	SINE/MIR	1	110	(158)	1338691
1766	13.3	3.4	6.3	chr15	68621765	68622064	(33369125)	C	AluJb	SINE/Alu	(10)	302	12	1338692
303	26.0	0.0	6.3	chr15	69143826	69143936	(32847253)	C	MIRb	SINE/MIR	(0)	268	165	1339719
12	21.7	0.0	0.0	chr15	70062369	70062400	(31928789)	+	(GCGG)n	Simple_repeat	1	32	(0)	1341412
746	25.2	10.3	0.4	chr15	70149791	70150053	(31841136)	C	HAL1	LINE/L1	(723)	1784	1493	1341566
862	29.0	14.9	1.6	chr15	72136018	72136448	(29854741)	+	L4_A_Mam	LINE/RTE-X	4400	4897	(93)	1344966
12	17.0	2.2	6.5	chr15	72230804	72230848	(29760341)	+	(GAGGATG)n	Simple_repeat	1	46	(0)	1345108
405	33.1	5.7	5.1	chr15	73651276	73651590	(28339599)	+	MLT1J	LTR/ERVL-MaLR	148	464	(48)	1347474
1262	25.3	5.9	2.9	chr15	73651626	73652261	(28338928)	C	HAL1ME	LINE/L1	(664)	1801	1056	1347466
736	25.4	4.4	7.5	chr15	74978797	74979103	(27012086)	+	MLT1J	LTR/ERVL-MaLR	1	297	(215)	1349929
1798	14.9	0.0	0.3	chr15	74979121	74979402	(27011787)	+	AluJb	SINE/Alu	2	282	(30)	1349930
340	16.9	0.2	0.0	chr15	77885434	77886029	(24105160)	+	(CA)n	Simple_repeat	1	597	(0)	1354845
3003	29.4	10.2	4.7	chr15	77968415	77969288	(24021901)	C	HAL1	LINE/L1	(423)	2084	1153	1354967
312	18.2	13.5	1.3	chr15	80033463	80033540	(21957649)	C	MER81	DNA/hAT-Blackjack	(24)	90	2	1358833
16	16.8	0.0	0.0	chr15	96330806	96330833	(5660356)	+	(GT)n	Simple_repeat	1	28	(0)	1385726
238	27.2	2.4	2.4	chr16	965631	965713	(89372632)	+	HAL1	LINE/L1	1680	1762	(745)	1395362
522	33.7	9.4	0.9	chr16	11521004	11521335	(78817010)	+	Tigger12c	DNA/TcMar-Tigger	268	630	(104)	1415879
19	19.7	0.0	2.1	chr16	12803887	12803934	(77534411)	+	G-rich	Low_complexity	1	48	(0)	1418653
925	23.0	5.1	0.5	chr16	15792470	15792674	(74545671)	C	MER58A	DNA/hAT-Charlie	(1)	223	9	1425231
1847	15.8	1.0	2.5	chr16	15792718	15793034	(74545311)	C	AluSz	SINE/Alu	(0)	312	1	1425232
1357	26.2	7.4	6.7	chr16	56574776	56575533	(33762812)	C	HAL1ME	LINE/L1	(639)	1826	1057	1483325
133	13.0	2.3	2.9	chr16	57628843	57629108	(32709237)	+	(AGTGTG)n	Simple_repeat	1	272	(0)	1485455
317	24.8	4.9	5.7	chr16	77896394	77896517	(12441828)	+	MIRb	SINE/MIR	128	250	(18)	1520692
2167	26.7	13.8	2.9	chr16	87630713	87632117	(2706228)	C	HAL1	LINE/L1	(143)	2364	781	1538820
286	24.2	0.0	0.0	chr16	88812033	88812098	(1526247)	C	Kanga1d	DNA/TcMar-Tc2	(0)	609	544	1540480
2130	14.8	0.0	0.0	chr17	2264620	2264917	(80992524)	+	AluSz	SINE/Alu	1	298	(14)	1548772
2147	8.9	0.0	8.3	chr17	2404023	2404360	(80853081)	+	AluSx1	SINE/Alu	1	310	(2)	1549027
1914	25.2	11.2	5.4	chr17	2974373	2974946	(80282495)	+	L1MEi	LINE/L1	1454	2072	(140)	1550361
2186	25.9	11.6	3.8	chr17	4622276	4623469	(78633972)	C	HAL1	LINE/L1	(439)	2068	769	1553415
46	0.0	0.0	0.0	chr17	6069391	6069429	(77188012)	+	(GT)n	Simple_repeat	1	39	(0)	1556343
20	0.0	0.0	0.0	chr17	6069430	6069451	(77187990)	+	(AG)n	Simple_repeat	1	22	(0)	1556344
45	4.1	2.0	0.0	chr17	6069775	6069825	(77187616)	+	(GT)n	Simple_repeat	1	52	(0)	1556345
697	26.4	3.0	0.8	chr17	7174610	7176778	(76080663)	+	(CA)n	Simple_repeat	1	2233	(0)	1558389
29	0.0	0.0	0.0	chr17	7176793	7176817	(76080624)	+	(CA)n	Simple_repeat	1	25	(0)	1558389
35	0.0	2.8	0.0	chr17	7176937	7176972	(76080469)	+	(CCCCAG)n	Simple_repeat	1	37	(0)	1558390
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
648	1.4	0.0	0.0	chr17	8125746	8125817	(75131624)	+	tRNA-Gly-GGY	tRNA	1	72	(2)	1560137
670	0.0	0.0	0.0	chr17	8186358	8186429	(75071012)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1560263
779	1.2	0.0	0.0	chr17	8226607	8226691	(75030750)	C	tRNA-Ser-TCY	tRNA	(0)	85	1	1560366
276	26.4	12.4	5.2	chr17	10077575	10077746	(73179695)	+	HAL1	LINE/L1	380	565	(1942)	1563984
654	24.6	8.7	0.8	chr17	10077769	10078010	(73179431)	+	HAL1	LINE/L1	1680	1942	(565)	1563984
15	22.1	0.0	5.7	chr17	16381261	16381313	(66876128)	+	G-rich	Low_complexity	1	53	(0)	1574858
2175	8.4	0.0	0.0	chr17	16453009	16453281	(66804160)	+	AluSx4	SINE/Alu	1	273	(37)	1575011
43	10.0	0.0	0.0	chr17	16453298	16453363	(66804078)	+	(ACACAC)n	Simple_repeat	1	66	(0)	1575012
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
1477	15.5	9.6	2.8	chr17	21039923	21040212	(62217229)	+	AluJo	SINE/Alu	1	312	(0)	1583510
1912	9.7	5.7	0.7	chr17	28719056	28719324	(54538117)	C	AluJb	SINE/Alu	(29)	283	1	1589194
206	23.2	6.7	0.0	chr17	28719340	28719395	(54538046)	+	MIR3	SINE/MIR	67	126	(82)	1589195
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
49	0.0	0.0	0.0	chr17	29744861	29744902	(53512539)	+	(GT)n	Simple_repeat	1	42	(0)	1591253
17	13.7	0.0	0.0	chr17	31549981	31550012	(51707429)	+	(CGGGGC)n	Simple_repeat	1	32	(0)	1594798
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
1485	17.8	7.4	0.0	chr17	32123710	32123973	(51133468)	C	AluJb	SINE/Alu	(26)	286	2	1596118
21	7.6	0.0	0.0	chr17	34613147	34613174	(48644267)	+	(CT)n	Simple_repeat	1	28	(0)	1600741
39	2.7	0.0	0.0	chr17	34613175	34613212	(48644229)	+	(AC)n	Simple_repeat	1	38	(0)	1600742
34	12.8	0.0	0.0	chr17	38601622	38601682	(44655759)	+	(AC)n	Simple_repeat	1	61	(0)	1608156
477	27.3	9.3	6.9	chr17	38745533	38745676	(44511765)	C	MIR3	SINE/MIR	(52)	156	1	1608478
188	25.2	16.7	10.8	chr17	38745836	38745964	(44511477)	C	MIRc	SINE/MIR	(92)	176	39	1608481
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
48	22.8	1.8	0.0	chr17	45127720	45127831	(38129610)	+	(GT)n	Simple_repeat	1	114	(0)	1621401
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
515	20.4	12.0	5.8	chr17	45151665	45151820	(38105621)	+	Charlie4z	DNA/hAT-Charlie	1	167	(0)	1621437
2755	25.0	14.0	3.3	chr17	46107255	46108651	(37148790)	+	L2a	LINE/L2	1846	3417	(9)	1623387
113	5.0	2.7	0.7	chr17	46265247	46265394	(36992047)	+	(TTC)n	Simple_repeat	1	152	(0)	1623742
45	10.2	1.3	2.5	chr17	46265395	46265468	(36991973)	+	(TCC)n	Simple_repeat	2	75	(0)	1623743
2084	13.3	1.6	1.0	chr17	46265469	46265777	(36991664)	C	AluJb	SINE/Alu	(1)	311	1	1623744
61	0.0	0.0	0.0	chr17	46852390	46852441	(36405000)	+	(GT)n	Simple_repeat	1	52	(0)	1624849
50	2.2	0.0	0.0	chr17	48252714	48252760	(35004681)	+	(GT)n	Simple_repeat	1	47	(0)	1627538
30	18.1	5.2	1.2	chr17	48604820	48604896	(34652545)	+	(TC)n	Simple_repeat	1	81	(0)	1628133
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
2426	9.3	0.0	0.0	chr17	49193185	49193496	(34063945)	+	AluSx	SINE/Alu	1	312	(0)	1629401
22	11.0	0.0	2.4	chr17	49193541	49193581	(34063860)	+	(GAAA)n	Simple_repeat	1	41	(0)	1629402
240	41.8	5.9	1.3	chr17	58387991	58388218	(24869223)	C	MamRTE1	LINE/RTE-BovB	(2798)	1014	776	1644916
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
254	25.6	10.1	9.4	chr17	59776886	59777161	(23480280)	C	HAL1	LINE/L1	(396)	2111	1834	1647924
876	25.2	5.6	3.8	chr17	59777176	59777493	(23479948)	C	HAL1	LINE/L1	(749)	1758	1435	1647924
1248	27.3	5.4	7.9	chr17	65236341	65236758	(18020683)	C	L1MEd	LINE/L1	(5298)	1788	1394	1658263
2403	4.8	1.0	0.7	chr17	66303721	66304009	(16953432)	+	AluSx	SINE/Alu	1	290	(22)	1660072
385	31.4	12.1	0.6	chr17	66509020	66509134	(16748307)	C	MLT1H2	LTR/ERVL-MaLR	(290)	199	63	1660382
2577	18.6	5.4	3.5	chr17	66509135	66509163	(16748278)	C	MLT2B4	LTR/ERVL	(0)	556	528	1660383
49	2.2	0.0	0.0	chr17	66509164	66509209	(16748232)	+	(GT)n	Simple_repeat	1	46	(0)	1660384
2577	18.6	5.4	3.5	chr17	66509210	66509724	(16747717)	C	MLT2B4	LTR/ERVL	(29)	527	2	1660383
13	19.1	0.0	0.0	chr17	68292140	68292169	(14965272)	+	(GCA)n	Simple_repeat	1	30	(0)	1663905
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
265	27.1	10.1	8.9	chr17	73474271	73474416	(9783025)	C	MIRb	SINE/MIR	(75)	193	46	1672393
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
116	29.6	0.5	1.3	chr17	75092625	75092860	(8164581)	+	(GT)n	Simple_repeat	1	234	(0)	1675334
293	24.7	0.6	0.1	chr17	76547631	76548316	(6709125)	+	(AC)n	Simple_repeat	1	690	(0)	1678251
30	0.0	0.0	0.0	chr17	76671394	76671419	(6586022)	+	(GT)n	Simple_repeat	1	26	(0)	1678522
202	29.4	8.6	1.2	chr17	76671539	76671624	(6585817)	+	L2c	LINE/L2	3294	3386	(1)	1678523
249	5.9	0.0	0.0	chr17	76671636	76671669	(6585772)	+	Alu	SINE/Alu	1	34	(99)	1678524
508	30.1	14.0	4.7	chr17	78547133	78547617	(4709824)	C	L1M6	LINE/L1	(694)	2025	1398	1682015
316	36.4	4.6	6.8	chr17	79030153	79030319	(4227122)	C	L1ME4a	LINE/L1	(4)	6120	5966	1682870
38	5.0	0.0	0.0	chr17	79030320	79030361	(4227080)	+	(TG)n	Simple_repeat	1	42	(0)	1682871
316	36.4	4.6	6.8	chr17	79030362	79030441	(4227000)	C	L1ME4a	LINE/L1	(159)	5965	5882	1682870
102	2.4	4.5	1.4	chr17	79030442	79030574	(4226867)	+	(TCTT)n	Simple_repeat	1	139	(0)	1682872
13	21.2	2.6	0.0	chr17	80219745	80219782	(3037659)	+	G-rich	Low_complexity	1	39	(0)	1684679
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
44	2.4	0.0	0.0	chr18	49017086	49017127	(31356158)	+	(GT)n	Simple_repeat	1	42	(0)	1752841
206	31.9	7.1	1.1	chr19	715495	715586	(57902030)	C	L2b	LINE/L2	(272)	3115	3018	1797434
1974	28.4	10.7	5.5	chr19	1770881	1771689	(56845927)	C	HAL1	LINE/L1	(261)	2246	1348	1799483
1032	26.4	13.9	5.5	chr19	5116252	5116587	(53501029)	+	HAL1	LINE/L1	1471	1821	(686)	1807217
60	0.0	0.0	0.0	chr19	6166281	6166331	(52451285)	+	(TG)n	Simple_repeat	1	51	(0)	1809599
2259	8.2	1.4	0.0	chr19	6166332	6166612	(52451004)	C	AluSx1	SINE/Alu	(27)	285	1	1809600
18	4.5	0.0	0.0	chr19	13026722	13026744	(45590872)	+	(CT)n	Simple_repeat	1	23	(0)	1825778
29	0.0	0.0	0.0	chr19	13026745	13026769	(45590847)	+	(TG)n	Simple_repeat	1	25	(0)	1825779
652	30.4	12.1	1.4	chr19	27792130	27792822	(30824794)	+	L1MEf	LINE/L1	482	1258	(4942)	1847923
1162	27.4	13.0	1.2	chr19	28403510	28404111	(30213505)	+	L2a	LINE/L2	2476	3141	(285)	1848714
482	26.9	0.7	7.0	chr19	28404149	28404304	(30213312)	+	Charlie15a	DNA/hAT-Charlie	77	222	(2)	1848715
62	0.0	0.0	0.0	chr19	28406119	28406171	(30211445)	+	(AC)n	Simple_repeat	1	53	(0)	1848719
13	0.0	5.0	0.0	chr19	28425262	28425281	(30192335)	+	(GTT)n	Simple_repeat	1	21	(0)	1848749
12	0.0	0.0	5.0	chr19	29587361	29587380	(29030236)	+	(AGT)n	Simple_repeat	1	20	(0)	1850447
1593	31.5	11.2	5.9	chr19	30079106	30080070	(28537546)	C	HAL1	LINE/L1	(442)	2065	1046	1851362
2524	8.1	0.0	0.0	chr19	30084800	30085106	(28532510)	C	AluSq	SINE/Alu	(6)	307	1	1851366
2206	12.6	8.1	0.6	chr19	31203859	31204210	(27413406)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1852890
128	19.6	3.7	2.8	chr19	31204211	31204443	(27413173)	+	(CTTC)n	Simple_repeat	2	236	(0)	1852891
12	13.4	4.2	8.0	chr19	32692415	32692462	(25925154)	+	(CCTGG)n	Simple_repeat	1	50	(0)	1855321
1438	10.1	0.0	0.0	chr19	32758960	32759138	(25858478)	+	AluSx	SINE/Alu	1	179	(133)	1855444
263	27.4	7.1	4.7	chr19	32759221	32759399	(25858217)	+	MIR1_Amn	SINE/MIR	2	190	(18)	1855445
958	26.4	19.2	5.3	chr19	32781242	32781687	(25835929)	C	HAL1	LINE/L1	(503)	2004	1451	1855487
35	8.8	0.0	0.0	chr19	33274201	33274248	(25343368)	+	(TG)n	Simple_repeat	1	48	(0)	1856521
49	37.9	0.0	0.9	chr19	33274297	33274517	(25343099)	+	(GT)n	Simple_repeat	1	221	(0)	1856522
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
783	18.9	1.8	6.1	chr19	34973560	34973603	(23644013)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1859420
56	0.0	0.0	0.0	chr19	34973604	34973651	(23643965)	+	(GT)n	Simple_repeat	1	48	(0)	1859421
2231	8.5	0.3	0.0	chr19	34973652	34973934	(23643682)	C	AluSx1	SINE/Alu	(28)	284	1	1859422
25	7.3	4.7	0.0	chr19	36572901	36572943	(22044673)	+	(AAAC)n	Simple_repeat	1	45	(0)	1862814
192	25.7	10.7	0.0	chr19	36687879	36687972	(21929644)	+	L2a	LINE/L2	3260	3400	(26)	1863053
1659	16.3	10.0	20.2	chr19	36772044	36772287	(21845329)	C	LTR25	LTR/ERV1	(489)	355	16	1863212
23	29.9	4.0	1.0	chr19	36851461	36851559	(21766057)	+	(GT)n	Simple_repeat	1	103	(0)	1863384
27	29.8	0.0	4.0	chr19	37595201	37595301	(21022315)	+	(TG)n	Simple_repeat	1	101	(0)	1864717
684	10.1	2.6	2.1	chr19	38375161	38375278	(20242338)	+	FLAM_C	SINE/Alu	4	146	(20)	1866529
1863	11.5	4.0	3.0	chr19	38865068	38865362	(19752254)	+	AluJb	SINE/Alu	14	311	(1)	1867614
643	16.0	9.0	2.2	chr19	38865366	38865454	(19752162)	+	MLT1B	LTR/ERVL-MaLR	212	311	(79)	1867615
4937	9.1	1.4	5.5	chr19	38865455	38865543	(19752073)	C	LTR8	LTR/ERV1	(0)	691	607	1867616
2315	9.1	0.0	2.6	chr19	38865544	38865851	(19751765)	+	AluY	SINE/Alu	2	301	(10)	1867617
4937	9.1	1.4	5.5	chr19	38865852	38866298	(19751318)	C	LTR8	LTR/ERV1	(85)	606	182	1867616
2304	10.3	0.3	0.0	chr19	39060622	39060933	(19556683)	C	AluSp	SINE/Alu	(0)	313	1	1868132
2032	11.8	0.0	0.0	chr19	39060935	39061242	(19556374)	C	AluSx1	SINE/Alu	(0)	312	2	1868133
570	14.6	3.7	0.0	chr19	39073976	39074078	(19543538)	+	Alu	SINE/Alu	206	312	(0)	1868175
63	18.1	2.6	3.2	chr19	39074079	39074232	(19543384)	+	GA-rich	Low_complexity	1	158	(0)	1868176
373	21.5	18.4	10.2	chr19	39074343	39074539	(19543077)	C	L2a	LINE/L2	(0)	3426	3210	1868177
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
230	28.7	6.2	8.3	chr19	39558288	39558420	(19059196)	C	L2b	LINE/L2	(748)	2671	2542	1869345
270	28.1	4.6	4.6	chr19	39996743	39996850	(18620766)	C	L2c	LINE/L2	(0)	3387	3280	1870082
2345	9.2	0.3	1.9	chr19	40624382	40624697	(17992919)	C	AluSp	SINE/Alu	(1)	312	2	1871537
26	0.0	0.0	0.0	chr19	40624704	40624728	(17992888)	+	(ATTTT)n	Simple_repeat	1	25	(0)	1871538
18	12.2	2.8	0.0	chr19	40624729	40624764	(17992852)	+	(TAATTTT)n	Simple_repeat	1	37	(0)	1871539
2258	13.1	0.0	0.0	chr19	40896943	40897254	(17720362)	+	AluSz	SINE/Alu	1	312	(0)	1872192
389	29.3	4.6	4.6	chr19	40897255	40897420	(17720196)	C	MIR	SINE/MIR	(8)	254	88	1872193
20	29.2	1.6	0.0	chr19	40963687	40963748	(17653868)	+	(AC)n	Simple_repeat	1	63	(0)	1872325
12	3.6	10.0	3.0	chr19	40963870	40963899	(17653717)	+	GA-rich	Low_complexity	1	33	(0)	1872326
67	26.0	5.0	3.7	chr19	42154216	42154552	(16463064)	+	(AGAGAC)n	Simple_repeat	1	354	(0)	1874692
2522	8.1	0.0	0.0	chr19	43778230	43778538	(14839078)	C	AluY	SINE/Alu	(2)	309	1	1877654
29	2.8	2.8	0.0	chr19	43783687	43783722	(14833894)	+	(TCTCTCTG)n	Simple_repeat	1	37	(0)	1877663
467	24.5	1.9	0.9	chr19	43785559	43785665	(14831951)	C	L2a	LINE/L2	(27)	3399	3292	1877666
60	13.4	3.5	4.1	chr19	43785688	43785829	(14831787)	+	(TCTT)n	Simple_repeat	1	147	(0)	1877667
369	28.9	0.9	1.9	chr19	43785843	43785948	(14831668)	+	SVA_D	Retroposon/SVA	203	307	(1079)	1877668
714	12.9	1.0	0.0	chr19	43785866	43785966	(14831650)	C	AluJr	SINE/Alu	(205)	107	6	1877669
37	0.0	0.0	0.0	chr19	43901552	43901583	(14716033)	+	(CA)n	Simple_repeat	1	32	(0)	1877885
230	31.4	1.9	4.7	chr19	43902153	43902259	(14715357)	+	L2a	LINE/L2	3320	3423	(3)	1877886
538	27.9	2.4	10.7	chr19	44193666	44193982	(14423634)	C	MER65-int	LTR/ERV1	(3893)	978	689	1878346
302	31.0	1.3	5.5	chr19	44194031	44194194	(14423422)	C	MER54B	LTR/ERVL	(99)	694	538	1878348
1542	22.0	1.3	1.9	chr19	44194265	44194578	(14423038)	C	AluJr	SINE/Alu	(0)	312	1	1878349
1340	15.2	0.0	0.5	chr19	44199194	44199390	(14418226)	C	AluJb	SINE/Alu	(31)	281	86	1878359
2164	11.3	1.0	0.3	chr19	44199522	44199831	(14417785)	C	AluSp	SINE/Alu	(0)	313	2	1878360
10102	5.0	0.2	10.2	chr19	44203295	44204831	(14412785)	+	SVA_B	Retroposon/SVA	1	1383	(0)	1878365
20	15.2	2.9	7.1	chr19	44204837	44204904	(14412712)	+	A-rich	Low_complexity	1	70	(0)	1878366
1090	27.2	10.5	2.7	chr19	44204967	44205630	(14411986)	+	L1ME5	LINE/L1	5284	6005	(189)	1878367
458	28.1	3.3	3.9	chr19	45531505	45531753	(13085863)	C	L1MEj	LINE/L1	(763)	1744	1538	1881548
504	29.0	8.9	1.0	chr19	48539660	48539853	(10077763)	+	MIR	SINE/MIR	51	252	(10)	1889000
2102	11.3	0.0	0.0	chr19	48539883	48540164	(10077452)	+	AluSx1	SINE/Alu	20	301	(11)	1889001
365	26.6	15.1	0.5	chr19	49848967	49849159	(8768457)	C	Tigger13a	DNA/TcMar-Tigger	(539)	232	7	1892070
1705	15.7	0.0	0.4	chr19	50224823	50225077	(8392539)	+	AluJr	SINE/Alu	1	254	(58)	1893030
618	23.4	10.9	12.7	chr19	50225078	50225402	(8392214)	C	L1ME3G	LINE/L1	(11)	913	592	1893029
1948	16.9	1.0	0.3	chr2	47306781	47307087	(194886442)	+	AluJb	SINE/Alu	1	309	(3)	1983773
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
53	0.0	0.0	0.0	chr2	85742721	85742765	(156450764)	+	(TG)n	Simple_repeat	1	45	(0)	2041418
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
2082	25.1	7.4	3.2	chr2	165825013	165825620	(76367909)	C	HAL1	LINE/L1	(658)	1849	1228	2150186
23	3.7	0.0	0.0	chr2	200773401	200773428	(41420101)	+	(CA)n	Simple_repeat	1	28	(0)	2198822
1907	27.8	9.7	4.0	chr2	218085718	218087172	(24106357)	+	HAL1	LINE/L1	624	2164	(343)	2225455
12	10.0	2.7	5.3	chr2	218864218	218864247	(23329282)	+	(TCCTCTT)n	Simple_repeat	1	29	(0)	2226942
2273	11.0	0.3	2.5	chr2	218864248	218864566	(23328963)	C	AluSx1	SINE/Alu	(0)	312	1	2226943
1761	15.7	3.8	1.4	chr2	219369321	219369606	(22823923)	+	AluJb	SINE/Alu	2	294	(18)	2227802
34	0.0	0.0	0.0	chr2	219369609	219369637	(22823892)	+	(AC)n	Simple_repeat	1	29	(0)	2227803
445	32.6	0.0	0.0	chr2	219369684	219369812	(22823717)	C	ERV3-16A3_I-int	LTR/ERVL	(3812)	1414	1286	2227804
23	25.1	3.6	4.4	chr2	219369904	219370016	(22823513)	+	A-rich	Low_complexity	1	112	(0)	2227805
14	28.5	2.2	0.0	chr2	219369963	219370008	(22823521)	+	GA-rich	Low_complexity	1	47	(0)	2227806
22	17.3	0.0	2.1	chr2	231708583	231708630	(10484899)	+	(CGC)n	Simple_repeat	1	48	(0)	2247479
561	26.2	17.7	0.5	chr2	240814128	240814552	(1378977)	+	HAL1ME	LINE/L1	1310	1823	(642)	2260404
832	27.9	4.8	8.6	chr2	241219872	241220384	(973145)	C	L1MEi	LINE/L1	(332)	1880	1396	2260837
13	12.1	3.6	0.0	chr20	46255707	46255734	(18188433)	+	(TCCT)n	Simple_repeat	1	29	(0)	2337297
643	34.5	6.5	3.4	chr20	48807161	48807753	(15636414)	C	L1ME3G	LINE/L1	(47)	845	229	2342918
2087	11.5	1.1	0.0	chr20	49538704	49538981	(14905186)	C	AluSx1	SINE/Alu	(31)	281	1	2344692
242	18.8	0.0	0.0	chr20	49538992	49539039	(14905128)	+	L1ME3	LINE/L1	6114	6161	(1)	2344688
247	20.0	3.0	3.0	chr20	49539206	49539272	(14904895)	+	HAL1b	LINE/L1	2330	2396	(25)	2344693
273	29.4	11.4	1.6	chr20	57435515	57435648	(7008519)	C	MIRb	SINE/MIR	(9)	259	105	2361176
18	8.7	0.0	0.0	chr21	16420333	16420357	(30289626)	+	(T)n	Simple_repeat	1	25	(0)	2380416
211	27.4	1.6	0.0	chr21	29074154	29074215	(17635768)	C	MIRb	SINE/MIR	(19)	249	187	2397697
491	29.2	2.2	1.4	chr21	29074299	29074461	(17635522)	C	MIR	SINE/MIR	(39)	169	3	2397697
266	28.7	3.3	1.1	chr21	31506060	31506147	(15203836)	C	MIR3	SINE/MIR	(107)	101	12	2401491
25	15.5	0.0	0.0	chr21	31506240	31506282	(15203701)	+	(AC)n	Simple_repeat	1	43	(0)	2401492
2734	13.7	10.8	5.1	chr21	31506317	31506635	(15203348)	C	L1MB2	LINE/L1	(0)	6171	5816	2401493
245	28.1	10.6	0.7	chr21	31560356	31560491	(15149492)	+	L2a	LINE/L2	2698	2848	(571)	2401595
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
21	19.3	0.0	0.0	chr21	33025855	33025901	(13684082)	+	(CCCCGC)n	Simple_repeat	1	47	(0)	2404180
203	27.9	12.2	1.2	chr21	33492178	33492257	(13217726)	+	MIRb	SINE/MIR	23	112	(156)	2405099
53	0.0	0.0	0.0	chr21	34202389	34202433	(12507550)	+	(GT)n	Simple_repeat	1	45	(0)	2406265
18	4.8	0.0	0.0	chr21	34202434	34202455	(12507528)	+	(AG)n	Simple_repeat	1	22	(0)	2406266
253	22.4	13.3	0.0	chr21	34543977	34544060	(12165923)	+	MIRb	SINE/MIR	106	217	(51)	2406798
222	28.0	10.7	0.0	chr21	34544061	34544135	(12165848)	+	MER5A	DNA/hAT-Charlie	3	86	(103)	2406799
243	16.4	21.4	0.0	chr21	34544139	34544193	(12165790)	+	MLT1E3	LTR/ERVL-MaLR	1	70	(610)	2406800
1311	19.1	20.6	2.3	chr21	34544255	34544608	(12165375)	+	MLT1E3	LTR/ERVL-MaLR	189	624	(0)	2406800
14	21.0	3.3	4.8	chr21	34888319	34888378	(11821605)	+	(CACGC)n	Simple_repeat	1	62	(0)	2407307
17	12.7	0.0	0.0	chr21	34888500	34888525	(11821458)	+	(A)n	Simple_repeat	1	26	(0)	2407308
49	0.0	0.0	0.0	chr21	36389760	36389801	(10320182)	+	(TG)n	Simple_repeat	1	42	(0)	2409772
621	30.8	10.1	2.0	chr21	36389831	36390051	(10319932)	C	MamRep605	LTR?	(31)	818	564	2409773
981	27.0	1.6	3.9	chr21	36636374	36636631	(10073352)	+	MIR	SINE/MIR	10	261	(1)	2410229
2292	27.3	4.2	4.4	chr21	36636637	36637574	(10072409)	C	HAL1ME	LINE/L1	(686)	1779	844	2410226
57	37.2	1.6	3.3	chr21	36700209	36700591	(10009392)	+	(TTCT)n	Simple_repeat	1	389	(0)	2410358
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
16	11.7	3.6	0.0	chr21	37073463	37073490	(9636493)	+	(GT)n	Simple_repeat	1	29	(0)	2410978
28	15.5	0.0	0.0	chr21	37339465	37339509	(9370474)	+	A-rich	Low_complexity	1	45	(0)	2411416
260	27.9	2.5	0.0	chr21	37547714	37547792	(9162191)	+	MIR3	SINE/MIR	87	167	(41)	2411766
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
1440	13.9	3.8	0.9	chr21	39388093	39388322	(7321661)	+	AluSz	SINE/Alu	1	237	(75)	2414500
492	25.5	12.7	0.5	chr21	39388339	39388539	(7321444)	C	L1MC4	LINE/L1	(283)	7759	7531	2414501
52	26.2	0.0	0.0	chr21	41777573	41777699	(4932284)	+	(AC)n	Simple_repeat	1	127	(0)	2417984
49	0.0	0.0	2.2	chr21	41777706	41777751	(4932232)	+	(CA)n	Simple_repeat	1	46	(0)	2417985
2526	9.4	6.5	3.8	chr21	41783544	41783964	(4926019)	+	LTR3B	LTR/ERVK	1	433	(4)	2417996
609	30.2	4.8	3.6	chr21	42488583	42488997	(4220986)	+	Tigger11a	DNA/TcMar-Tigger	304	723	(12)	2418948
191	28.2	4.9	0.0	chr21	42654955	42655032	(4054951)	C	MIRc	SINE/MIR	(181)	87	6	2419142
45	28.2	0.8	1.5	chr21	42655099	42655232	(4054751)	+	(CA)n	Simple_repeat	1	135	(0)	2419143
181	31.1	0.0	4.7	chr21	42655289	42655352	(4054631)	+	MER5A	DNA/hAT-Charlie	7	67	(122)	2419144
2122	15.2	0.0	0.0	chr21	42677641	42677942	(4032041)	C	AluSx	SINE/Alu	(10)	302	1	2419171
2511	6.8	0.7	0.0	chr21	43660282	43660591	(3049392)	+	AluSp	SINE/Alu	1	312	(1)	2420582
2830	8.1	1.6	0.3	chr21	43771602	43771971	(2938012)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2420771
2200	10.5	1.0	0.0	chr21	43774943	43775238	(2934745)	+	AluSz	SINE/Alu	2	300	(12)	2420776
1336	27.3	9.1	2.3	chr21	44608517	44609247	(2100736)	+	L1ME3	LINE/L1	5254	6055	(118)	2421947
1849	24.7	8.4	2.8	chr21	44609251	44610026	(2099957)	+	HAL1	LINE/L1	1552	2374	(133)	2421948
40	0.0	0.0	0.0	chr21	45105080	45105116	(1604867)	+	(TTGTT)n	Simple_repeat	1	37	(0)	2422528
2115	12.6	0.0	0.3	chr21	45105117	45105401	(1604582)	C	AluSx1	SINE/Alu	(28)	284	1	2422529
767	28.7	12.8	1.3	chr21	45117982	45118355	(1591628)	C	HAL1ME	LINE/L1	(333)	2132	1710	2422547
710	28.4	1.2	2.8	chr21	45118390	45118639	(1591344)	C	HAL1ME	LINE/L1	(712)	1753	1508	2422547
225	31.5	5.3	2.7	chr21	46323406	46323552	(386431)	C	MER4E	LTR/ERV1	(153)	613	463	2423810
235	22.1	3.4	5.5	chr21	46323663	46323753	(386230)	+	LTR16A	LTR/ERVL	135	223	(228)	2423811
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
2413	8.7	0.0	1.6	chr22	25486795	25487106	(25331362)	C	AluY	SINE/Alu	(4)	307	1	2442311
483	26.3	5.5	7.1	chr22	25487107	25487207	(25331261)	+	L2a	LINE/L2	3330	3426	(0)	2442310
358	27.1	0.3	0.6	chr22	25487213	25488121	(25330347)	+	(GATG)n	Simple_repeat	1	912	(0)	2442312
2518	7.8	0.0	0.3	chr22	29979211	29979519	(20838949)	+	AluY	SINE/Alu	1	308	(3)	2451757
2406	7.8	0.0	3.7	chr22	36411189	36411509	(14406959)	+	AluY	SINE/Alu	2	310	(1)	2464959
1721	14.6	1.4	7.0	chr22	36411510	36411626	(14406842)	C	AluJb	SINE/Alu	(213)	99	1	2464958
425	26.9	10.7	6.3	chr22	36411627	36411663	(14406805)	+	MIRb	SINE/MIR	211	241	(27)	2464957
262	32.3	7.5	0.0	chr22	36411705	36411828	(14406640)	+	MIRc	SINE/MIR	121	254	(14)	2464960
256	32.7	0.0	4.7	chr22	37400783	37400888	(13417580)	+	MIRc	SINE/MIR	159	259	(9)	2467139
318	34.4	2.6	1.3	chr22	37400938	37401090	(13417378)	C	L2b	LINE/L2	(2)	3373	3219	2467140
234	27.4	8.8	4.3	chr22	37514277	37514476	(13303992)	C	MIR	SINE/MIR	(33)	197	3	2467404
327	26.3	2.1	4.0	chr22	37514782	37514880	(13303588)	C	MIR	SINE/MIR	(24)	238	142	2467405
2030	9.5	6.3	0.7	chr22	40452542	40452826	(10365642)	+	AluSx1	SINE/Alu	2	303	(9)	2473575
30	7.7	0.0	0.0	chr22	41667807	41667848	(9150620)	+	(ATTT)n	Simple_repeat	1	42	(0)	2476467
2329	11.8	0.0	0.0	chr22	41667881	41668185	(9150283)	C	AluSg	SINE/Alu	(5)	305	1	2476468
933	27.5	6.3	0.0	chr22	43582377	43582674	(7235794)	+	HAL1	LINE/L1	1495	1812	(695)	2480464
1386	28.9	9.4	5.5	chr22	44515219	44516205	(6302263)	C	HAL1	LINE/L1	(0)	2507	1478	2482096
2182	10.5	1.3	1.3	chr22	50322544	50322849	(495619)	C	AluSx	SINE/Alu	(6)	306	1	2490437
2142	10.4	3.3	0.0	chr22	50322850	50323020	(495448)	C	AluYj4	SINE/Alu	(11)	300	125	2490438
30	0.0	0.0	0.0	chr22	50323021	50323048	(495420)	+	(T)n	Simple_repeat	1	28	(0)	2490439
2142	10.4	3.3	0.0	chr22	50323049	50323165	(495303)	C	AluYj4	SINE/Alu	(193)	118	2	2490438
185	30.0	11.8	3.2	chr3	10116117	10116240	(188179319)	+	L2	LINE/L2	2730	2865	(554)	2508671
46	0.0	0.0	0.0	chr3	12003780	12003818	(186291741)	+	(GT)n	Simple_repeat	1	39	(0)	2512530
16	0.0	0.0	0.0	chr3	12003834	12003851	(186291708)	+	(GT)n	Simple_repeat	1	18	(0)	2512530
14	18.4	0.0	0.0	chr3	12003960	12003990	(186291569)	+	(GTGC)n	Simple_repeat	1	31	(0)	2512531
804	30.6	9.8	4.8	chr3	16331267	16331722	(181963837)	C	HAL1	LINE/L1	(182)	2325	1845	2520324
1780	27.0	8.2	2.5	chr3	16331757	16332477	(181963082)	C	HAL1	LINE/L1	(762)	1745	980	2520324
2402	7.7	0.0	0.3	chr3	47512992	47513291	(150782268)	C	AluSx	SINE/Alu	(13)	299	1	2567324
242	26.5	0.0	0.0	chr3	52243451	52243518	(146052041)	+	L1ME4b	LINE/L1	52	119	(773)	2575633
455	24.6	2.7	0.0	chr3	52243522	52243631	(146051928)	+	HAL1	LINE/L1	1654	1766	(741)	2575635
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
3264	23.7	8.0	1.6	chr3	133901839	133903251	(64392308)	C	L1ME3A	LINE/L1	(13)	6160	4620	2690644
27	13.0	0.0	0.0	chr3	136802777	136802818	(61492741)	+	(TG)n	Simple_repeat	1	42	(0)	2695123
29	11.6	2.1	0.0	chr3	136802818	136802864	(61492695)	+	(GA)n	Simple_repeat	1	48	(0)	2695124
23	31.0	0.0	0.0	chr3	136802819	136802852	(61492707)	+	(TGAG)n	Simple_repeat	1	76	(0)	2695125
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
737	32.9	9.2	4.4	chr3	159825614	159826155	(38469404)	C	L2b	LINE/L2	(1)	3374	2799	2728808
705	29.6	11.5	0.3	chr4	3736359	3736690	(186477865)	C	HAL1	LINE/L1	(628)	1879	1506	2793534
793	19.4	3.3	0.6	chr4	5715299	5715474	(184499081)	+	MER5A	DNA/hAT-Charlie	6	186	(3)	2797046
2034	24.1	10.9	3.5	chr4	5715481	5715735	(184498820)	C	HAL1	LINE/L1	(696)	1811	1542	2797044
1005	29.8	8.3	4.3	chr4	25397400	25397936	(164816619)	C	HAL1	LINE/L1	(668)	1839	1278	2828825
12	12.6	11.1	2.0	chr4	37685972	37686016	(152528539)	+	G-rich	Low_complexity	1	50	(0)	2846486
2437	8.9	0.3	0.0	chr4	123399095	123399386	(66815169)	+	AluSx	SINE/Alu	1	293	(19)	2963911
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
14	16.3	4.7	2.2	chr4	182144437	182144479	(8070076)	+	(GGAGGCG)n	Simple_repeat	1	45	(0)	3043030
552	24.1	4.7	0.0	chr5	1800232	1800372	(179737887)	C	L1ME2z	LINE/L1	(3)	6441	6294	3056665
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
37	7.2	0.0	0.0	chr5	32710880	32710924	(148827335)	+	(GT)n	Simple_repeat	1	45	(0)	3097342
1941	24.9	5.9	1.5	chr5	36815820	36816292	(144721967)	+	MLT1G1	LTR/ERVL-MaLR	85	579	(0)	3103393
573	28.0	6.8	1.9	chr5	36816303	36816568	(144721691)	+	L1MEi	LINE/L1	1539	1818	(394)	3103392
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
2106	11.4	7.3	1.4	chr5	39092007	39092352	(142445907)	+	THE1D	LTR/ERVL-MaLR	14	381	(0)	3107061
628	30.6	8.3	1.4	chr5	39092362	39092573	(142445686)	C	MLT2E	LTR/ERVL	(365)	263	36	3107062
3283	17.4	1.2	0.2	chr5	39092577	39093133	(142445126)	C	MER68	LTR/ERVL	(0)	563	1	3107063
413	36.9	10.9	3.5	chr5	41746580	41747380	(139790879)	+	L2c	LINE/L2	2259	3123	(264)	3110783
194	33.3	10.4	0.0	chr5	41747412	41747480	(139790779)	C	L2c	LINE/L2	(13)	3362	3286	3110784
255	25.7	16.8	6.4	chr5	41747541	41747773	(139790486)	C	L2c	LINE/L2	(196)	3191	2930	3110784
22	11.0	0.0	2.4	chr5	43019193	43019233	(138519026)	+	(TTGTTT)n	Simple_repeat	1	41	(0)	3112414
17	12.7	4.3	4.1	chr5	43019447	43019493	(138518766)	+	(TTTAT)n	Simple_repeat	1	49	(0)	3112415
18	0.0	0.0	0.0	chr5	54249673	54249692	(127288567)	+	(A)n	Simple_repeat	1	20	(0)	3121423
2379	15.3	3.7	1.0	chr5	54249951	54250366	(127287893)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3121424
339	26.2	5.4	5.4	chr5	73281532	73281660	(108256599)	C	UCON62	DNA?	(36)	141	13	3150264
54	0.0	0.0	0.0	chr5	81736144	81736189	(99802070)	+	(AC)n	Simple_repeat	1	46	(0)	3163544
271	22.4	1.3	3.3	chr5	81736295	81736378	(99801881)	+	L2a	LINE/L2	3302	3426	(0)	3163545
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
17	15.2	4.3	2.1	chr5	93582091	93582136	(87956123)	+	(CCTCTC)n	Simple_repeat	1	48	(0)	3178829
31	3.3	0.0	0.0	chr5	93582772	93582802	(87955457)	+	(GT)n	Simple_repeat	1	31	(0)	3178831
21	7.7	0.0	0.0	chr5	95960512	95960539	(85577720)	+	(GT)n	Simple_repeat	1	28	(0)	3181911
3330	16.2	6.5	0.5	chr5	96928689	96929356	(84608903)	+	MER50	LTR/ERV1	1	711	(23)	3183354
1786	27.7	6.4	4.1	chr5	109468126	109468878	(72069381)	+	L1ME4b	LINE/L1	107	890	(2)	3199027
294	16.9	12.2	0.0	chr5	109469016	109469080	(72069179)	+	MER112	DNA/hAT-Charlie	1	74	(187)	3199029
34	0.0	0.0	2.8	chr5	109469084	109469119	(72069140)	+	(AAAG)n	Simple_repeat	1	36	(0)	3199030
218	31.1	6.2	7.8	chr5	110054519	110054633	(71483626)	+	MIR3	SINE/MIR	31	143	(65)	3199822
2152	12.3	5.3	0.8	chr5	122327405	122327765	(59210494)	+	THE1D	LTR/ERVL-MaLR	4	381	(0)	3215757
12	16.5	0.0	0.0	chr5	125376330	125376356	(56161903)	+	(ACAC)n	Simple_repeat	1	27	(0)	3219974
13	14.5	2.2	6.4	chr5	125376417	125376430	(56161829)	+	GA-rich	Low_complexity	1	13	(0)	3219975
2285	10.8	0.0	1.9	chr5	125376431	125376745	(56161514)	+	AluSq2	SINE/Alu	1	309	(4)	3219976
36	0.0	0.0	0.0	chr5	125550455	125550485	(55987774)	+	(GT)n	Simple_repeat	1	31	(0)	3220180
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
45	2.4	0.0	0.0	chr5	139272593	139272635	(42265624)	+	(CA)n	Simple_repeat	1	43	(0)	3240464
16	22.7	5.6	1.8	chr5	139739174	139739227	(41799032)	+	(GT)n	Simple_repeat	1	57	(0)	3241424
306	27.6	12.1	1.7	chr5	139749448	139749565	(41788694)	C	MIRb	SINE/MIR	(13)	255	124	3241439
183	17.8	2.2	4.3	chr5	139749534	139749580	(41788679)	C	MIR1_Amn	SINE/MIR	(76)	154	109	3241440
17	34.5	1.1	3.3	chr5	139752434	139752522	(41785737)	+	(AC)n	Simple_repeat	1	90	(0)	3241447
28	34.2	0.8	2.4	chr5	139752627	139752752	(41785507)	+	(CA)n	Simple_repeat	1	127	(0)	3241448
457	34.4	10.6	0.8	chr5	148925077	148925474	(32612785)	C	L3	LINE/CR1	(2)	4097	3656	3256692
14	18.9	0.0	2.6	chr5	150449424	150449461	(31088798)	+	(CGTGGC)n	Simple_repeat	1	38	(0)	3259965
2481	6.6	0.0	0.3	chr5	154835577	154835880	(26702379)	C	AluY	SINE/Alu	(8)	303	1	3268144
627	22.6	2.0	3.3	chr5	172007359	172007509	(9530750)	C	L2a	LINE/L2	(0)	3426	3278	3296456
213	26.7	19.1	5.1	chr5	172007510	172007585	(9530674)	+	MIR3	SINE/MIR	6	97	(111)	3296457
280	32.9	4.0	0.4	chr5	172437428	172437564	(9100695)	C	MIRb	SINE/MIR	(127)	141	1	3297432
721	23.7	6.2	1.9	chr5	172903634	172903848	(8634411)	C	MIR	SINE/MIR	(1)	261	37	3298473
30	18.5	0.0	0.0	chr5	172903962	172904022	(8634237)	+	(CACA)n	Simple_repeat	1	61	(0)	3298474
16	17.7	2.4	2.3	chr5	172904109	172904150	(8634109)	+	(TCCTT)n	Simple_repeat	1	43	(0)	3298475
875	20.8	5.2	2.2	chr5	172904159	172904384	(8633875)	C	L1ME3	LINE/L1	(0)	6162	5930	3298476
2159	25.7	11.6	7.7	chr5	173274418	173275246	(8263013)	C	HAL1	LINE/L1	(98)	2409	1463	3299320
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
120	11.6	3.5	3.7	chr5	177379713	177379859	(4158400)	+	(TCTT)n	Simple_repeat	1	149	(0)	3307295
2353	10.2	0.3	1.3	chr5	177379860	177380199	(4158060)	C	AluSp	SINE/Alu	(0)	313	3	3307296
12	31.1	1.8	0.0	chr5	177404202	177404256	(4134003)	+	G-rich	Low_complexity	1	56	(0)	3307346
268	25.4	9.7	5.9	chr5	178206314	178206462	(3331797)	C	MIRb	SINE/MIR	(101)	167	8	3308798
825	19.6	0.7	0.0	chr5	181173370	181173517	(364742)	C	AluJb	SINE/Alu	(1)	311	163	3313783
702	0.0	0.0	0.0	chr5	181173650	181173724	(364535)	+	tRNA-Val-GTG	tRNA	1	75	(1)	3313784
688	0.0	0.0	0.0	chr5	181218270	181218342	(319917)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313881
667	0.0	0.0	0.0	chr5	181221979	181222051	(316208)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	3313889
11	10.3	2.7	7.9	chr6	1170878	1170914	(169635065)	+	(GGTCTG)n	Simple_repeat	1	38	(0)	3315734
2052	9.7	6.1	0.0	chr6	3338331	3338609	(167467370)	C	AluSg	SINE/Alu	(13)	297	1	3318756
2427	16.1	4.6	10.0	chr6	3338610	3338691	(167467288)	+	MER34A	LTR/ERV1	496	568	(3)	3318755
720	30.5	7.6	4.9	chr6	4692537	4692931	(166113048)	+	HAL1ME	LINE/L1	1365	1809	(698)	3320876
50	0.0	0.0	0.0	chr6	10423592	10423634	(160382345)	+	(TG)n	Simple_repeat	1	43	(0)	3329457
34	0.0	0.0	0.0	chr6	11043405	11043433	(159762546)	+	(AC)n	Simple_repeat	1	29	(0)	3330623
19	0.0	0.0	0.0	chr6	11043468	11043488	(159762491)	+	(AC)n	Simple_repeat	1	21	(0)	3330623
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
485	7.5	6.8	2.0	chr6	24358693	24359596	(146446383)	+	(TATATAT)n	Simple_repeat	1	965	(0)	3351758
781	18.4	0.0	0.0	chr6	24359617	24359730	(146446249)	+	AluJo	SINE/Alu	3	116	(196)	3351759
16	8.3	0.0	0.0	chr6	24359731	24359756	(146446223)	+	(GGAA)n	Simple_repeat	1	26	(0)	3351760
15	13.9	0.0	2.9	chr6	24720504	24720537	(146085442)	+	A-rich	Low_complexity	1	34	(0)	3352414
623	4.2	0.0	0.0	chr6	26311196	26311267	(144494712)	C	tRNA-Gln-CAA	tRNA	(3)	72	1	3354996
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
686	0.0	0.0	0.0	chr6	26538054	26538127	(144267852)	+	tRNA-Val-GTG	tRNA	1	74	(2)	3355428
597	5.6	0.0	0.0	chr6	26553503	26553574	(144252405)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3355456
2069	10.8	0.3	3.3	chr6	26568131	26568437	(144237542)	+	AluSz6	SINE/Alu	1	298	(14)	3355490
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
27	0.0	3.5	0.0	chr6	27177039	27177067	(143628912)	+	(AAGAAAA)n	Simple_repeat	1	30	(0)	3356431
22	17.3	0.0	0.0	chr6	27177166	27177204	(143628775)	+	A-rich	Low_complexity	1	39	(0)	3356432
677	0.0	0.0	0.0	chr6	27177214	27177288	(143628691)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356433
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
2376	8.0	0.0	0.3	chr6	27231266	27231586	(143574393)	+	AluSx	SINE/Alu	1	312	(0)	3356543
863	30.7	5.9	5.3	chr6	27231697	27231771	(143574208)	+	L1ME5	LINE/L1	5259	5333	(861)	3356544
2304	11.1	0.0	0.0	chr6	27231772	27232077	(143573902)	+	AluSx4	SINE/Alu	2	307	(3)	3356545
657	2.7	0.0	0.0	chr6	27235509	27235581	(143570398)	+	tRNA-Val-GTY	tRNA	1	73	(3)	3356551
2297	7.3	0.0	0.3	chr6	27235607	27235925	(143570054)	C	AluSc5	SINE/Alu	(0)	309	1	3356552
2181	11.0	0.0	0.7	chr6	27334586	27334877	(143471102)	+	AluSx	SINE/Alu	1	290	(22)	3356731
634	5.3	0.0	0.0	chr6	27334987	27335062	(143470917)	C	tRNA-Lys-AAA	tRNA	(0)	76	1	3356732
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
788	0.0	0.0	0.0	chr6	27503039	27503120	(143302859)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3357006
748	2.4	0.0	0.0	chr6	27505828	27505909	(143300070)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3357009
754	2.4	0.0	0.0	chr6	27553413	27553494	(143252485)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3357102
15	9.0	12.2	1.8	chr6	27553496	27553544	(143252435)	+	(GACAT)n	Simple_repeat	1	55	(0)	3357103
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
573	7.0	0.0	0.0	chr6	27791357	27791427	(143014552)	C	tRNA-Gln-CAA	tRNA	(4)	71	1	3357599
371	32.2	0.8	0.0	chr6	27791621	27791738	(143014241)	C	MIRb	SINE/MIR	(22)	246	128	3357600
627	5.4	0.0	0.0	chr6	27795859	27795932	(143010047)	C	tRNA-Gln-CAA	tRNA	(1)	74	1	3357606
486	28.7	6.5	0.6	chr6	27796019	27796176	(143009803)	+	MER20B	DNA/hAT-Charlie	5	172	(611)	3357607
671	0.0	0.0	0.0	chr6	28543115	28543186	(142262793)	C	tRNA-Arg-CGA	tRNA	(4)	72	1	3358801
187	30.7	7.3	8.2	chr6	28589183	28589292	(142216687)	C	L3b	LINE/CR1	(531)	4701	4593	3358868
666	0.0	0.0	0.0	chr6	28589379	28589450	(142216529)	+	tRNA-Gln-CAA	tRNA	1	72	(3)	3358869
628	4.0	0.0	0.0	chr6	28607156	28607230	(142198749)	+	tRNA-Ala-GCY_	tRNA	1	75	(0)	3358903
649	1.4	0.0	0.0	chr6	28719704	28719775	(142086204)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359087
589	6.8	0.0	0.0	chr6	28747744	28747816	(142058163)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359146
2799	16.1	0.6	2.3	chr6	28747872	28748347	(142057632)	+	MER1A	DNA/hAT-Charlie	62	529	(0)	3359147
631	23.5	2.9	0.0	chr6	28803352	28803487	(142002492)	+	AluJo	SINE/Alu	134	273	(39)	3359251
18	0.0	0.0	0.0	chr6	28803489	28803511	(142002468)	+	(AAGC)n	Simple_repeat	1	23	(0)	3359252
47	24.6	0.7	3.5	chr6	28803519	28803658	(142002321)	+	G-rich	Low_complexity	1	141	(0)	3359253
619	1.4	0.0	0.0	chr6	28838444	28838515	(141967464)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359318
2493	6.9	0.3	0.0	chr6	28898109	28898411	(141907568)	C	AluSg	SINE/Alu	(6)	304	1	3359415
2020	12.1	2.0	1.4	chr6	28898431	28898727	(141907252)	C	AluSz	SINE/Alu	(12)	300	2	3359416
50	0.0	0.0	0.0	chr6	31735808	31735850	(139070129)	+	(CA)n	Simple_repeat	1	43	(0)	3363796
239	31.2	4.0	0.0	chr6	35182034	35182129	(135623850)	C	L2a	LINE/L2	(14)	3412	3313	3369862
15	28.2	0.0	2.2	chr6	36676649	36676693	(134129286)	+	(TG)n	Simple_repeat	1	45	(0)	3373071
185	26.5	3.9	0.0	chr6	36676794	36676842	(134129137)	+	MIR	SINE/MIR	203	253	(9)	3373072
2588	6.5	0.0	0.3	chr6	37101568	37101876	(133704103)	C	AluY	SINE/Alu	(3)	308	1	3373946
322	28.1	18.5	3.4	chr6	37273738	37274065	(133531914)	C	Mam_R4	LINE/Dong-R4	(1142)	2667	2279	3374397
1970	13.5	0.0	1.0	chr6	37763860	37764156	(133041823)	+	AluJb	SINE/Alu	1	294	(18)	3375305
646	22.3	3.5	0.0	chr6	37764157	37764295	(133041684)	+	MIR	SINE/MIR	104	247	(15)	3375299
547	26.0	4.4	0.6	chr6	37764308	37764481	(133041498)	C	MER104	DNA/TcMar-Tc2	(0)	181	1	3375306
13	13.2	0.0	0.0	chr6	40587342	40587366	(130218613)	+	(TGTG)n	Simple_repeat	1	25	(0)	3379731
16	14.2	0.0	0.0	chr6	40587387	40587417	(130218562)	+	(CACACA)n	Simple_repeat	1	31	(0)	3379732
43	2.5	0.0	0.0	chr6	40587494	40587534	(130218445)	+	(CA)n	Simple_repeat	1	41	(0)	3379733
193	34.9	0.0	0.0	chr6	41449899	41449961	(129356018)	C	L2b	LINE/L2	(7)	3419	3357	3381182
26	21.8	0.0	0.0	chr6	41470109	41470171	(129335808)	+	(GT)n	Simple_repeat	1	63	(0)	3381217
28	29.3	1.1	2.1	chr6	41489371	41489465	(129316514)	+	(CA)n	Simple_repeat	1	96	(0)	3381256
1401	25.7	8.6	1.3	chr6	41537001	41537453	(129268526)	+	LTR16C	LTR/ERVL	1	489	(0)	3381360
47	4.2	0.0	0.0	chr6	43702713	43702761	(127103218)	+	(TG)n	Simple_repeat	1	49	(0)	3385855
554	28.8	11.3	1.4	chr6	44104992	44105213	(126700766)	+	MIRb	SINE/MIR	16	262	(6)	3386579
2455	8.2	0.3	0.0	chr6	44105419	44105723	(126700256)	+	AluSp	SINE/Alu	1	306	(7)	3386580
270	30.6	8.6	4.0	chr6	44238177	44238322	(126567657)	+	MIRc	SINE/MIR	75	222	(46)	3386833
566	31.4	3.8	7.7	chr6	46452305	46452604	(124353375)	C	MLT1I	LTR/ERVL-MaLR	(5)	406	119	3390212
282	29.9	4.0	1.0	chr6	46452674	46452771	(124353208)	+	MIR	SINE/MIR	152	252	(10)	3390211
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
1799	6.6	4.6	0.0	chr6	52996047	52996272	(117809707)	C	AluSx	SINE/Alu	(75)	237	1	3399376
17	25.9	3.0	1.5	chr6	56529790	56529855	(114276124)	+	A-rich	Low_complexity	1	68	(0)	3404277
3208	17.3	0.9	0.6	chr6	79384562	79385107	(91420872)	C	MER68	LTR/ERVL	(3)	560	13	3431148
20	22.7	0.0	1.9	chr6	84763995	84764047	(86041932)	+	(CGC)n	Simple_repeat	1	53	(0)	3438230
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
350	24.2	0.1	0.0	chr6	85679445	85679519	(85126460)	C	MIRc	SINE/MIR	(53)	155	81	3439431
326	22.2	0.0	0.0	chr6	111080739	111080801	(59725178)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	328	3474990
1010	14.7	3.5	2.4	chr6	111080803	111080972	(59725007)	C	FAM	SINE/Alu	(13)	172	1	3474991
1982	14.8	1.2	2.4	chr6	111080975	111081312	(59724667)	C	MLT1B	LTR/ERVL-MaLR	(52)	338	5	3474990
451	33.1	5.4	6.7	chr6	111567971	111568401	(59237578)	+	Plat_L3	LINE/CR1	2911	3335	(251)	3475843
68	0.0	0.0	0.0	chr6	111568433	111568490	(59237489)	+	(GT)n	Simple_repeat	1	58	(0)	3475844
488	11.9	1.5	0.0	chr6	111568636	111568702	(59237277)	+	AluSz	SINE/Alu	1	68	(244)	3475845
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
825	30.1	5.8	7.0	chr6	125013121	125013345	(45792634)	C	L2a	LINE/L2	(29)	3397	3179	3493716
46	2.3	0.0	0.0	chr6	125013346	125013389	(45792590)	+	(TG)n	Simple_repeat	1	44	(0)	3493717
825	30.1	5.8	7.0	chr6	125013390	125013549	(45792430)	C	L2a	LINE/L2	(248)	3178	3017	3493716
2137	7.0	0.4	0.4	chr6	132813784	132814042	(37991937)	+	AluSq2	SINE/Alu	1	259	(54)	3504375
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
104	25.1	6.1	2.2	chr6	158852933	158853360	(11952619)	+	(CA)n	Simple_repeat	1	454	(0)	3543240
210	31.5	6.4	0.0	chr7	191569	191641	(159154332)	C	Tigger19a	DNA/TcMar-Tigger	(105)	218	141	3558058
1228	12.1	1.2	0.0	chr7	5411372	5411537	(153934436)	+	AluSx	SINE/Alu	137	304	(8)	3566970
703	24.7	12.5	1.1	chr7	5411559	5411840	(153934133)	+	HAL1	LINE/L1	1599	1917	(590)	3566963
29	19.8	1.2	3.7	chr7	25856377	25856457	(133489516)	+	(TCTT)n	Simple_repeat	1	82	(0)	3596025
47	0.0	0.0	0.0	chr7	25856999	25857038	(133488935)	+	(AC)n	Simple_repeat	1	40	(0)	3596026
14	9.1	0.0	0.0	chr7	25857039	25857062	(133488911)	+	(GCAC)n	Simple_repeat	1	24	(0)	3596027
1099	32.9	3.7	4.0	chr7	32937731	32938354	(126407619)	+	LTR49-int	LTR/ERV1	535	1156	(6419)	3607033
887	26.5	6.6	7.9	chr7	38964664	38965168	(120380805)	C	L1MEd	LINE/L1	(4998)	2105	1608	3615889
483	25.5	6.2	4.5	chr7	38965178	38965510	(120380463)	C	L1MEd	LINE/L1	(5941)	1162	824	3615889
36	0.0	0.0	0.0	chr7	75639563	75639593	(83706380)	+	(GT)n	Simple_repeat	1	31	(0)	3670121
13	18.7	0.0	5.0	chr7	97871802	97871841	(61474132)	+	G-rich	Low_complexity	1	40	(0)	3701403
2308	7.8	0.3	0.0	chr7	99375782	99376077	(59969896)	+	AluSz	SINE/Alu	2	298	(14)	3704603
1336	16.9	5.3	2.4	chr7	99376078	99376225	(59969748)	+	AluSz	SINE/Alu	137	299	(13)	3704602
333	31.1	12.8	1.8	chr7	99376233	99376399	(59969574)	+	MIRb	SINE/MIR	52	239	(29)	3704604
33	14.5	0.0	0.0	chr7	100167981	100168005	(59177968)	+	(GAGA)n	Simple_repeat	1	25	(0)	3706002
31	0.0	0.0	0.0	chr7	100168006	100168032	(59177941)	+	(AC)n	Simple_repeat	1	27	(0)	3706003
33	14.5	0.0	0.0	chr7	100168033	100168068	(59177905)	+	(GAGA)n	Simple_repeat	2	37	(0)	3706004
2408	8.1	1.6	0.0	chr7	100570567	100570873	(58775100)	+	AluSx	SINE/Alu	1	312	(0)	3706888
17	10.0	2.9	0.0	chr7	101672572	101672587	(57673386)	+	(TTTC)n	Simple_repeat	1	17	(0)	3709378
60	3.8	2.3	3.3	chr7	101672588	101672675	(57673298)	+	(CTTC)n	Simple_repeat	1	90	(0)	3709379
2236	13.9	0.3	0.0	chr7	101672676	101673004	(57672969)	C	AluSz6	SINE/Alu	(0)	312	1	3709380
273	40.8	0.0	0.0	chr7	104884441	104884543	(54461430)	+	MER5A	DNA/hAT-Charlie	87	189	(0)	3714745
1000	14.2	0.0	10.2	chr7	112202588	112202792	(47143181)	+	FAM	SINE/Alu	1	184	(1)	3725446
304	26.2	0.5	2.6	chr7	112203121	112203196	(47142777)	C	MIRb	SINE/MIR	(138)	130	45	3725447
20	7.8	0.0	0.0	chr7	114414866	114414892	(44931081)	+	(TC)n	Simple_repeat	1	27	(0)	3728377
37	9.9	0.0	0.0	chr7	114414893	114414946	(44931027)	+	(CA)n	Simple_repeat	1	54	(0)	3728378
996	32.5	7.1	5.6	chr7	116729870	116730879	(42615094)	C	L2c	LINE/L2	(1)	3386	2378	3731477
438	31.1	5.0	3.0	chr7	116777939	116778173	(42567800)	C	Tigger15a	DNA/TcMar-Tigger	(2)	713	474	3731522
15	0.0	0.0	0.0	chr7	128360988	128361004	(30984969)	+	(CA)n	Simple_repeat	1	17	(0)	3747073
25	3.4	0.0	0.0	chr7	128361074	128361103	(30984870)	+	(CT)n	Simple_repeat	1	30	(0)	3747074
43	0.0	0.0	0.0	chr7	128361104	128361140	(30984833)	+	(CA)n	Simple_repeat	1	37	(0)	3747075
31	31.6	2.4	0.8	chr7	128361162	128361284	(30984689)	+	(CA)n	Simple_repeat	1	126	(0)	3747075
782	29.1	8.8	3.1	chr7	131361653	131362102	(27983871)	C	L1M8	LINE/L1	(357)	1998	1521	3752667
801	22.7	7.9	2.3	chr7	133108443	133108703	(26237270)	C	HAL1	LINE/L1	(684)	1823	1547	3755401
630	2.8	0.0	0.0	chr7	139340700	139340771	(20005202)	+	tRNA-Arg-AGG	tRNA	1	72	(4)	3765383
40	9.0	0.0	1.6	chr7	148921305	148921365	(10424608)	+	(CA)n	Simple_repeat	1	61	(0)	3779608
501	30.2	12.5	2.0	chr7	157052909	157053266	(2292707)	C	L1ME3G	LINE/L1	(40)	884	484	3791772
1506	27.3	9.6	5.6	chr7	157053259	157053810	(2292163)	C	HAL1ME	LINE/L1	(628)	1837	1259	3791766
1373	25.9	9.5	6.2	chr8	8625706	8626233	(136512403)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	3805037
1014	15.1	0.0	0.7	chr8	17496180	17496331	(127642305)	+	AluJb	SINE/Alu	142	292	(20)	3818282
1927	16.8	0.0	0.7	chr8	20317766	20318074	(124820562)	C	AluJb	SINE/Alu	(5)	307	1	3822634
1189	15.5	0.0	0.0	chr8	20318151	20318318	(124820318)	C	AluJo	SINE/Alu	(8)	304	137	3822635
53	0.0	0.0	0.0	chr8	22111351	22111395	(123027241)	+	(TG)n	Simple_repeat	1	45	(0)	3825596
298	33.0	3.5	2.6	chr8	22111421	22111535	(123027101)	+	MIRc	SINE/MIR	122	237	(31)	3825597
2542	6.8	0.0	1.0	chr8	26290862	26291171	(118847465)	C	AluSg	SINE/Alu	(3)	307	1	3832498
199	20.3	1.7	5.4	chr8	36915924	36916503	(108222133)	+	GA-rich	Low_complexity	1	558	(0)	3849567
232	24.1	1.8	0.0	chr8	37479956	37480009	(107658627)	+	Plat_L3	LINE/CR1	3512	3566	(20)	3850374
2365	11.4	0.0	0.0	chr8	37705034	37705340	(107433296)	C	AluSg	SINE/Alu	(2)	308	2	3850815
498	32.2	4.1	0.8	chr8	37705438	37705637	(107432999)	+	MIR3	SINE/MIR	3	205	(3)	3850816
630	26.5	4.4	13.6	chr8	37947350	37947725	(107190911)	+	L2	LINE/L2	1522	1861	(1558)	3851283
841	27.2	8.9	0.4	chr8	37947734	37947991	(107190645)	C	MLT2E	LTR/ERVL	(10)	618	337	3851285
40	4.9	0.0	0.0	chr8	38381747	38381789	(106756847)	+	(CA)n	Simple_repeat	1	43	(0)	3852195
26	0.0	0.0	0.0	chr8	109576043	109576070	(35562566)	+	(A)n	Simple_repeat	1	28	(0)	3951032
59	1.9	0.0	0.0	chr8	143516526	143516580	(1622056)	+	(CA)n	Simple_repeat	1	55	(0)	4006282
1209	26.1	3.9	3.7	chr9	13647966	13648427	(124746290)	+	L1MEd	LINE/L1	1338	1800	(5286)	4027931
253	20.0	0.0	0.0	chr9	13648422	13648471	(124746246)	+	L1ME3	LINE/L1	6092	6141	(21)	4027932
4414	17.1	1.7	1.8	chr9	87815600	87816478	(50578239)	+	L1MA6	LINE/L1	4230	5107	(1036)	4110041
1003	22.5	15.7	2.9	chr9	89410564	89411039	(48983678)	+	HAL1	LINE/L1	1180	1727	(780)	4112475
45	2.4	0.0	0.0	chr9	94694371	94694413	(43700304)	+	(TG)n	Simple_repeat	1	43	(0)	4120116
23	29.0	3.3	5.1	chr9	95511304	95511371	(42883346)	+	(CTCC)n	Simple_repeat	66	157	(0)	4121310
671	32.7	1.8	0.9	chr9	123049822	123050040	(15344677)	C	MIRb	SINE/MIR	(31)	237	17	4170021
30	0.0	0.0	0.0	chr9	123395469	123395494	(14999223)	+	(TG)n	Simple_repeat	1	26	(0)	4170643
23	7.0	0.0	0.0	chr9	123395497	123395526	(14999191)	+	(AG)n	Simple_repeat	1	30	(0)	4170644
200	30.9	4.7	1.2	chr9	127451080	127451161	(10943556)	C	MIR3	SINE/MIR	(43)	165	81	4178232
57	0.0	5.1	0.0	chr9	129607459	129607517	(8787200)	+	(GT)n	Simple_repeat	1	62	(0)	4183238
1577	18.3	1.0	5.2	chr9	132102805	132103110	(6291607)	C	AluJr	SINE/Alu	(19)	293	1	4188226
2466	22.8	15.0	3.8	chr9	132103111	132103879	(6290838)	+	HAL1	LINE/L1	1594	2494	(13)	4188224
13	0.0	0.0	0.0	chr9	137241341	137241357	(1153360)	+	(CCG)n	Simple_repeat	1	17	(0)	4195377
2218	11.9	0.3	0.3	chrX	685160	685495	(155355400)	+	THE1B	LTR/ERVL-MaLR	1	336	(28)	4359163
477	30.7	10.3	2.8	chrX	685504	685998	(155354897)	C	L1MC4	LINE/L1	(1205)	1370	922	4359164
2333	8.5	0.0	0.7	chrX	1800073	1800366	(154240529)	+	AluSq2	SINE/Alu	1	292	(21)	4361830
1915	16.3	1.3	0.3	chrX	16771116	16771416	(139269479)	+	AluJb	SINE/Alu	3	306	(6)	4386662
791	28.9	6.4	3.3	chrX	16771508	16771808	(139269087)	+	AluJb	SINE/Alu	2	312	(0)	4386663
24	11.8	6.9	2.6	chrX	23804704	23804745	(132236150)	+	(TCTCCTT)n	Simple_repeat	1	45	(0)	4398116
28	4.9	4.7	0.0	chrX	23804746	23804788	(132236107)	+	(TTTC)n	Simple_repeat	1	45	(0)	4398117
24	11.8	6.9	2.6	chrX	23804789	23804803	(132236092)	+	(TCTCCTT)n	Simple_repeat	4	17	(0)	4398118
29	3.2	0.0	0.0	chrX	23804804	23804835	(132236060)	+	(TCCT)n	Simple_repeat	1	32	(0)	4398119
24	11.8	6.9	2.6	chrX	23804836	23804848	(132236047)	+	(TCTCCTT)n	Simple_repeat	4	17	(0)	4398120
14	21.6	1.3	7.9	chrX	23804849	23804858	(132236037)	+	(CTTC)n	Simple_repeat	2	24	(0)	4398121
2314	10.1	0.3	0.0	chrX	23804861	23805157	(132235738)	C	AluSq	SINE/Alu	(15)	298	1	4398122
2264	8.8	0.0	0.3	chrX	23997977	23998259	(132042636)	C	AluSg	SINE/Alu	(27)	283	2	4398559
2214	5.7	0.8	0.4	chrX	23998276	23998540	(132042355)	C	AluY	SINE/Alu	(29)	282	17	4398560
192	21.8	1.9	15.1	chrX	24151341	24151459	(131889436)	C	L2b	LINE/L2	(212)	3163	3061	4398945
20	13.7	0.0	0.0	chrX	41333712	41333743	(114707152)	+	(A)n	Simple_repeat	1	32	(0)	4424166
743	26.5	12.4	2.8	chrX	53370950	53371632	(102669263)	+	HAL1	LINE/L1	1636	2268	(197)	4443596
31	13.7	6.0	0.0	chrX	71146104	71146153	(84894742)	+	(CT)n	Simple_repeat	1	52	(0)	4460882
75	1.5	0.0	0.0	chrX	71146154	71146221	(84894674)	+	(CA)n	Simple_repeat	1	68	(0)	4460883
31	13.7	6.0	0.0	chrX	71146222	71146237	(84894658)	+	(CT)n	Simple_repeat	1	18	(0)	4460884
31	34.6	1.6	0.0	chrX	71146349	71146475	(84894420)	+	(TG)n	Simple_repeat	1	129	(0)	4460885
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
10519	20.1	6.3	4.6	chrX	74514038	74516045	(81524850)	+	L1MDa	LINE/L1	48	2122	(4511)	4465763
64	1.7	0.0	0.0	chrX	107742261	107742319	(48298576)	+	(GA)n	Simple_repeat	1	59	(0)	4504742
28	19.5	1.6	0.0	chrX	107742346	107742406	(48298489)	+	G-rich	Low_complexity	1	62	(0)	4504743
168	24.4	0.2	0.0	chrX	153512484	153512877	(2528018)	+	(CACACA)n	Simple_repeat	1	395	(0)	4570350
2055	16.4	1.0	0.3	chrX	153893227	153893536	(2147359)	+	AluJb	SINE/Alu	1	312	(0)	4570899
82	3.2	5.3	2.1	chrX	153893537	153893665	(2147230)	+	(AGAA)n	Simple_repeat	4	136	(0)	4570900
1003	15.7	2.5	1.0	chrX	153893691	153893883	(2147012)	+	MLT1A	LTR/ERVL-MaLR	179	374	(0)	4570898