914	23.7	5.3	0.0	chr1	75233212	75233426	(173722996)	C	L1PB4	LINE/L1	(3)	6153	5927	139690
697	24.0	9.7	2.5	chr1	178260743	178260981	(70695441)	+	Tigger13a	DNA/TcMar-Tigger	58	315	(456)	262819
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
474	25.7	16.3	0.4	chr1	240201980	240202206	(8754216)	C	LTR67B	LTR/ERVL	(336)	284	15	357314
5973	14.7	4.1	1.1	chr10	92662189	92663443	(41133979)	C	L1M4	LINE/L1	(3864)	2780	1422	509616
545	30.6	1.6	1.0	chr10	130924924	130926843	(2870579)	+	(TG)n	Simple_repeat	1	1951	(0)	570050
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
247	25.0	4.6	3.7	chr11	73523488	73523595	(61563027)	C	HAL1	LINE/L1	(29)	2478	2370	682030
1014	13.9	0.7	2.0	chr11	73523598	73523748	(61562874)	C	AluJo	SINE/Alu	(163)	149	1	682031
1104	22.3	10.8	4.1	chr11	73523749	73523864	(61562758)	C	HAL1	LINE/L1	(764)	1743	1627	682030
827	21.4	1.9	1.9	chr11	73523865	73524023	(61562599)	C	FRAM	SINE/Alu	(17)	159	1	682032
1104	22.3	10.8	4.1	chr11	73524024	73524346	(61562276)	C	HAL1	LINE/L1	(881)	1626	1271	682030
1641	26.8	15.0	2.6	chr11	80366969	80367653	(54718969)	+	LTR50	LTR/ERVL	2	786	(9)	695662
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
10723	11.0	1.6	0.1	chr11	96915289	96916841	(38169781)	+	THE1B-int	LTR/ERVL-MaLR	1	1578	(2)	720654
2268	11.4	2.8	3.0	chr11	96916844	96917204	(38169418)	+	THE1B	LTR/ERVL-MaLR	1	360	(4)	720654
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
549	28.9	16.4	4.0	chr12	1195421	1195857	(132079452)	+	MLT1L	LTR/ERVL-MaLR	119	610	(0)	780274
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
2559	7.1	0.0	0.6	chr12	15765804	15766114	(117509195)	C	AluSx3	SINE/Alu	(2)	309	1	803261
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
2138	9.9	0.0	0.0	chr12	93082995	93083266	(40192043)	C	AluSq2	SINE/Alu	(30)	283	12	912684
19	0.0	0.0	0.0	chr12	93083275	93083295	(40192014)	+	(T)n	Simple_repeat	1	21	(0)	912685
685	26.8	17.1	3.6	chr13	59980398	59980753	(54383575)	C	L2a	LINE/L2	(0)	3426	3013	1052825
597	36.5	4.9	3.6	chr13	84798822	84799326	(29565002)	+	HERVL-int	LTR/ERVL	2124	2635	(3019)	1085706
4195	13.7	1.2	5.3	chr13	88239937	88240694	(26123634)	+	LTR8A	LTR/ERV1	1	727	(0)	1090070
4873	23.6	6.0	3.1	chr13	88240695	88240986	(26123342)	C	L1M4	LINE/L1	(7202)	315	6	1090069
655	32.7	5.6	0.9	chr14	20329805	20330026	(86713692)	+	MIRb	SINE/MIR	32	264	(4)	1127853
203	25.5	0.0	0.0	chr14	20330026	20330072	(86713646)	C	MIRb	SINE/MIR	(159)	109	63	1127854
1761	13.6	0.3	13.1	chr14	20330096	20330493	(86713225)	+	L1PA17	LINE/L1	5805	6151	(15)	1127855
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
694	30.0	4.3	1.6	chr17	69143992	69144242	(14113199)	+	MIR	SINE/MIR	5	262	(0)	1665281
31	2.7	0.0	4.8	chr17	69144249	69144290	(14113151)	+	(CCT)n	Simple_repeat	1	42	(0)	1665282
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2756	26.0	4.6	4.2	chr2	67980315	67981017	(174212512)	C	HAL1	LINE/L1	(398)	2109	1384	2014859
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
267	27.8	1.8	0.9	chr2	135369116	135369224	(106824305)	+	Tigger15a	DNA/TcMar-Tigger	497	606	(109)	2108894
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
328	24.2	0.0	0.0	chr2	161279238	161279303	(80914226)	C	MER47C	DNA/TcMar-Tigger	(31)	66	1	2144205
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
3118	13.7	8.0	0.4	chr2	238077389	238077931	(4115598)	+	LTR69	LTR/ERVL	1	588	(0)	2257336
1481	22.4	3.7	0.3	chr20	28613766	28614055	(35830112)	C	AluJr	SINE/Alu	(5)	307	8	2303666
14982	24.9	3.7	1.9	chr20	28614056	28617655	(35826512)	C	L1MA6	LINE/L1	(2629)	4933	466	2303664
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
576	23.4	6.1	1.9	chr20	30866632	30866788	(33577379)	+	MIRb	SINE/MIR	33	196	(72)	2305530
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2046	20.1	5.4	2.5	chr4	26521672	26522120	(163692435)	+	MLT1C	LTR/ERVL-MaLR	1	463	(4)	2831212
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
1585	20.4	2.6	4.0	chr4	66948899	66949250	(123265305)	C	L1ME3A	LINE/L1	(2)	6171	5825	2886270
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1999	22.8	4.7	0.8	chr5	1235755	1236506	(180301753)	C	L1MEc	LINE/L1	(3679)	2640	1856	3056067
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
415	21.6	5.9	1.8	chr5	133251031	133251143	(48287116)	+	LTR81AB	LTR/Gypsy	2	119	(159)	3230749
282	30.9	6.0	2.3	chr5	133251199	133251327	(48286932)	+	LTR81AB	LTR/Gypsy	224	357	(1036)	3230749
316	19.1	1.6	1.6	chr5	158486259	158486322	(23051937)	C	MLT1N2	LTR/ERVL-MaLR	(4)	558	495	3274678
245	27.4	0.0	5.6	chr5	158486323	158486347	(23051912)	C	LTR67B	LTR/ERVL	(4)	616	533	3274679
585	23.6	5.2	2.9	chr5	170290054	170290223	(11248036)	+	LTR103b_Mam	LTR/ERV1?	325	498	(50)	3293327
437	32.7	7.4	9.5	chr5	170290289	170290812	(11247447)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	3293328
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
827	21.3	15.5	0.3	chr6	11102465	11102754	(159703225)	C	MER57E1	LTR/ERV1	(0)	372	38	3330743
3989	16.6	3.9	0.8	chr6	11102745	11103449	(159702530)	C	MER50	LTR/ERV1	(7)	727	1	3330744
2524	13.3	6.0	0.7	chr6	79599911	79600334	(91205645)	+	MER83	LTR/ERV1	1	448	(0)	3431481
2318	14.0	12.9	0.5	chr6	137960836	137961208	(32844771)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	3512255
2826	27.1	3.1	1.7	chr6	163884810	163885685	(6920294)	+	HAL1	LINE/L1	1033	1921	(586)	3550056
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
17	0.0	0.0	0.0	chr7	103550614	103550632	(55795341)	+	(T)n	Simple_repeat	1	19	(0)	3712891
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
16	4.5	0.0	0.0	chr8	37207583	37207605	(107931031)	+	(ATTA)n	Simple_repeat	1	23	(0)	3849993
15	0.0	0.0	0.0	chr8	37207905	37207921	(107930715)	+	(AC)n	Simple_repeat	1	17	(0)	3849994
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
1564	18.1	5.7	2.1	chr9	76003810	76004096	(62390621)	C	AluJr	SINE/Alu	(13)	299	2	4091818
2212	25.9	11.4	6.2	chr9	76004097	76005430	(62389287)	C	L1MC4	LINE/L1	(418)	7624	6698	4091817
1992	17.0	18.3	0.0	chr9	79418073	79418524	(58976193)	+	MLT2B4	LTR/ERVL	4	556	(0)	4097232
5401	14.4	3.4	0.9	chr9	79418538	79419328	(58975389)	C	L1MA5	LINE/L1	(2)	7717	6910	4097233
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1307	18.1	5.1	2.5	chrX	121504174	121504512	(34536383)	C	MSTB	LTR/ERVL-MaLR	(7)	421	1	4524505
557	25.4	4.5	3.5	chrX	121504513	121504773	(34536122)	C	L1ME1	LINE/L1	(3131)	3015	2752	4524504
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
396	27.7	2.0	3.9	chrY	11281214	11281367	(45946048)	+	L2	LINE/L2	724	874	(2545)	4589056
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057