2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
2303	9.1	0.0	0.7	chr1	27319087	27319394	(221637028)	+	AluSc	SINE/Alu	1	306	(3)	51502
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
931	25.8	4.5	3.9	chr1	32500964	32501270	(216455152)	C	L1MC4	LINE/L1	(494)	7548	7240	62991
2142	13.7	6.4	1.4	chr1	33200763	33201132	(215755290)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	64666
5654	23.3	5.2	1.1	chr1	33201133	33202314	(215754108)	+	L1MEc	LINE/L1	2654	3951	(2368)	64656
764	30.3	15.6	9.0	chr1	44531691	44532393	(204424029)	C	L3	LINE/CR1	(14)	4085	3328	86211
1536	13.3	0.4	0.9	chr1	56616863	56617087	(192339335)	C	AluJb	SINE/Alu	(3)	309	86	109195
334	20.9	11.0	2.8	chr1	56617096	56617203	(192339219)	C	L2	LINE/L2	(962)	2457	2340	109191
279	32.2	9.9	5.3	chr1	56617204	56617753	(192338669)	C	L2-3_Crp	LINE/L2	(972)	1124	547	109196
329	32.5	8.4	3.4	chr1	56688427	56688633	(192267789)	C	L2c	LINE/L2	(141)	3234	3010	109327
298	28.9	7.2	5.9	chr1	56688801	56688954	(192267468)	+	L2c	LINE/L2	3228	3371	(16)	109328
2158	11.0	2.4	0.0	chr1	62176034	62176323	(186780099)	+	AluSg	SINE/Alu	4	300	(10)	119652
2115	12.4	3.1	3.3	chr1	65442219	65442611	(183513811)	+	MER4D1	LTR/ERV1	509	900	(0)	125801
290	25.6	4.7	0.8	chr1	65442612	65442733	(183513689)	+	L1ME3A	LINE/L1	6035	6161	(12)	125802
2282	20.4	8.6	2.4	chr1	79666092	79666734	(169289688)	C	L1MD3	LINE/L1	(13)	7982	7320	146179
1065	24.5	7.5	5.5	chr1	81920367	81920785	(167035637)	+	LTR16	LTR/ERVL	1	428	(10)	149163
3015	26.2	11.4	5.9	chr1	87867842	87869274	(161087148)	+	L1MEc	LINE/L1	2022	3611	(2708)	157700
2764	21.9	5.7	4.6	chr1	94748640	94749691	(154206731)	+	L1MEc	LINE/L1	2177	3211	(3108)	168248
291	20.0	7.4	0.0	chr1	104671995	104672069	(144284353)	C	MLT1N2	LTR/ERVL-MaLR	(17)	545	465	181944
548	26.8	12.0	7.4	chr1	114498646	114499290	(134457132)	+	HAL1	LINE/L1	1083	1757	(750)	196695
315	23.6	9.2	0.0	chr1	114499402	114499490	(134456932)	+	L1MEd	LINE/L1	374	471	(6615)	196699
646	25.7	6.7	0.8	chr1	114499637	114499875	(134456547)	+	L1MEd	LINE/L1	591	844	(6242)	196699
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
2263	12.7	0.7	0.0	chr1	145803388	145803687	(103152735)	C	AluSx1	SINE/Alu	(10)	302	1	211551
188	37.4	7.3	0.9	chr1	145804004	145804119	(103152303)	C	Tigger19a	DNA/TcMar-Tigger	(37)	286	163	211552
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
952	28.2	5.5	7.2	chr1	150604929	150605065	(98351357)	C	LTR78	LTR/ERV1	(904)	400	269	219439
2513	12.8	6.1	0.2	chr1	150798593	150798992	(98157430)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	219855
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
489	11.0	0.0	0.0	chr1	161621675	161621747	(87334675)	+	tRNA-Asn-AAC	tRNA	1	73	(4)	237826
1400	18.4	3.3	1.9	chr1	166874505	166874775	(82081647)	+	AluJr	SINE/Alu	2	276	(36)	245814
11	18.1	2.4	4.8	chr1	166874859	166874899	(82081523)	+	(TTTAAT)n	Simple_repeat	1	42	(0)	245815
66	1.7	0.0	0.0	chr1	170689815	170689875	(78266547)	+	(TC)n	Simple_repeat	1	61	(0)	251640
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
1828	27.0	20.7	1.4	chr1	204417461	204418214	(44538208)	+	L2c	LINE/L2	941	1830	(1589)	301508
755	21.0	5.5	8.5	chr1	222455967	222456190	(26500232)	C	MER20	DNA/hAT-Charlie	(0)	219	3	329150
620	23.8	6.0	2.2	chr1	226333707	226333943	(22622479)	C	L1ME2	LINE/L1	(4300)	2100	1854	335696
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
19	16.9	2.9	6.9	chr1	232670111	232670180	(16286242)	+	(TCCTTTC)n	Simple_repeat	1	72	(0)	345234
239	26.8	1.0	2.0	chr1	232670638	232670736	(16285686)	+	L2b	LINE/L2	2113	2210	(1209)	345233
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
373	25.9	1.8	0.9	chr1	236282713	236282821	(12673601)	+	MIRb	SINE/MIR	157	266	(2)	351304
6591	25.2	6.7	5.8	chr1	237018378	237019470	(11936952)	C	L1MEc	LINE/L1	(2806)	3513	2336	352643
2002	29.2	6.1	4.3	chr1	240399325	240400238	(8556184)	+	L1M4b	LINE/L1	62	1221	(5646)	357573
812	20.3	1.7	18.2	chr10	38112505	38112569	(95684853)	C	L1M4c	LINE/L1	(5991)	616	558	430559
85	3.2	2.1	0.0	chr10	38112731	38112826	(95684596)	+	(TTTTC)n	Simple_repeat	1	98	(0)	430564
2160	10.8	0.7	0.0	chr10	38112828	38113105	(95684317)	C	AluSq	SINE/Alu	(33)	280	1	430565
2428	9.2	0.0	0.0	chr10	43007967	43008269	(90789153)	+	AluSc5	SINE/Alu	1	303	(6)	432850
2889	18.9	3.2	5.8	chr10	43008270	43008916	(90788506)	C	L1MC3	LINE/L1	(3242)	3079	2418	432841
3524	7.4	5.1	0.2	chr10	92591083	92591570	(41205852)	+	LTR10D	LTR/ERV1	1	513	(0)	509465
14	14.1	0.0	2.9	chr10	92591992	92592007	(41205415)	+	(ATT)n	Simple_repeat	1	16	(0)	509466
1224	26.1	8.2	2.5	chr10	92929474	92930073	(40867349)	+	L1MEd	LINE/L1	736	1372	(5731)	510170
603	22.5	2.8	14.3	chr10	92930054	92930220	(40867202)	+	L1MEd	LINE/L1	2597	2764	(3382)	510170
2414	8.4	0.0	0.0	chr10	92930221	92930506	(40866916)	+	AluSq2	SINE/Alu	1	286	(27)	510171
4105	24.6	6.9	2.5	chr10	112186846	112188371	(21609051)	+	L1MEc	LINE/L1	1903	3501	(2818)	542246
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
473	23.8	5.5	3.9	chr10	125926609	125926840	(7870582)	C	L1MEg	LINE/L1	(4419)	1823	1588	564216
348	25.5	16.3	3.9	chr10	125926881	125927035	(7870387)	C	L1ME3	LINE/L1	(12)	6161	5984	564226
436	13.8	0.0	0.0	chr10	125927039	125927103	(7870319)	C	Alu	SINE/Alu	(247)	65	1	564227
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
258	29.6	6.5	1.2	chr11	2888398	2888558	(132198064)	+	MLT1J2	LTR/ERVL-MaLR	34	203	(245)	576280
42	0.0	0.0	0.0	chr11	10900298	10900333	(124186289)	+	(GT)n	Simple_repeat	1	36	(0)	588338
4836	24.2	16.4	6.2	chr11	13427221	13429821	(121656801)	+	L1ME1	LINE/L1	2389	5375	(944)	592343
10628	23.3	5.3	1.9	chr11	15675486	15679947	(119406675)	+	L1ME1	LINE/L1	793	5704	(840)	595931
1623	15.8	1.8	4.1	chr11	33159624	33159771	(101926851)	+	AluJb	SINE/Alu	137	284	(28)	622922
548	28.6	13.6	6.0	chr11	33159772	33159905	(101926717)	+	L1MC5a	LINE/L1	2629	2763	(14)	622921
16	23.5	0.0	0.0	chr11	63682323	63682357	(71404265)	+	(T)n	Simple_repeat	1	35	(0)	664164
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
12178	19.6	5.2	2.4	chr11	71314256	71317054	(63769568)	C	L1MCa	LINE/L1	(780)	5541	2670	678050
2238	13.1	0.0	0.3	chr11	71317055	71317368	(63769254)	C	AluSq2	SINE/Alu	(0)	313	1	678053
1832	15.0	3.9	0.0	chr11	85641445	85641718	(49444904)	+	AluJo	SINE/Alu	1	285	(27)	704140
5412	25.3	6.6	3.9	chr11	85641719	85643175	(49443447)	+	L1MEc	LINE/L1	2524	4020	(2299)	704138
2024	24.2	5.7	2.4	chr11	87136229	87136896	(47949726)	C	L1MC	LINE/L1	(2201)	3945	3255	706700
1133	29.2	2.0	0.8	chr11	87136896	87137247	(47949375)	C	L1ME1	LINE/L1	(3412)	2734	2379	706697
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
2341	10.4	0.0	1.0	chr11	111564903	111565200	(23521422)	+	AluSx	SINE/Alu	13	307	(5)	741557
589	32.6	4.8	1.0	chr11	111565446	111565643	(23520979)	+	MIRb	SINE/MIR	17	222	(46)	741558
2541	15.2	3.3	0.9	chr11	111565692	111566110	(23520512)	+	MLT1C	LTR/ERVL-MaLR	37	465	(2)	741559
271	32.6	8.9	7.4	chr11	130222484	130222794	(4863828)	+	L2c	LINE/L2	3009	3324	(63)	771546
334	36.8	6.0	3.6	chr11	130222806	130223081	(4863541)	C	L2b	LINE/L2	(55)	3320	3038	771544
2207	17.4	2.8	1.9	chr11	134873032	134873459	(213163)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	777759
1293	27.7	5.2	8.7	chr11	134873460	134874294	(212328)	C	L1MEc	LINE/L1	(3372)	3569	3174	777756
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
227	31.3	0.0	9.2	chr12	26298692	26298800	(106976509)	C	L2c	LINE/L2	(0)	3387	3289	817777
32	0.0	0.0	0.0	chr12	34022251	34022280	(99253029)	+	(T)n	Simple_repeat	1	30	(0)	829732
704	15.4	0.0	0.0	chr12	66967553	66967656	(66307653)	C	FLAM_A	SINE/Alu	(19)	123	20	875179
3484	16.9	2.5	1.7	chr12	66967659	66968363	(66306946)	C	L1MCa	LINE/L1	(3212)	3352	2642	875177
2100	25.4	7.7	2.2	chr12	106254525	106255271	(27020038)	+	L2a	LINE/L2	2467	3267	(159)	935913
57	0.0	0.0	0.0	chr12	116858575	116858623	(16416686)	+	(CA)n	Simple_repeat	1	49	(0)	959126
17	13.1	0.0	0.0	chr12	116858676	116858701	(16416608)	+	(CT)n	Simple_repeat	1	26	(0)	959127
1859	13.4	5.2	0.7	chr12	122501193	122501483	(10773826)	+	AluJr	SINE/Alu	1	305	(7)	972005
4987	25.5	3.7	1.9	chr12	131079303	131080613	(2194696)	C	L1ME1	LINE/L1	(2296)	4023	2679	987705
2642	4.6	0.0	0.0	chr12	131080614	131080919	(2194390)	C	AluY	SINE/Alu	(5)	306	1	987706
16	8.2	0.0	12.0	chr13	42720949	42720998	(71643330)	+	(CTAAGAT)n	Simple_repeat	1	50	(0)	1027794
2239	8.6	0.0	9.6	chr13	49907694	49908017	(64456311)	C	AluY	SINE/Alu	(18)	293	1	1039292
2126	12.7	0.3	0.0	chr13	57097825	57098107	(57266221)	C	AluSp	SINE/Alu	(29)	284	1	1049136
1763	27.2	8.1	3.3	chr13	57098108	57100047	(57264281)	C	L1ME1	LINE/L1	(3368)	2951	870	1049134
769	32.7	12.9	1.3	chr13	65723843	65724386	(48639942)	C	L2a	LINE/L2	(15)	3411	2785	1060146
231	30.3	2.9	0.0	chr13	67069564	67069629	(47294699)	C	Tigger19b	DNA/TcMar-Tigger	(240)	310	243	1061824
299	34.1	9.9	1.2	chr13	67110623	67110788	(47253540)	C	MIRb	SINE/MIR	(45)	223	42	1061863
284	32.1	19.3	2.0	chr13	67110836	67111035	(47253293)	+	L2a	LINE/L2	3183	3425	(1)	1061864
12	9.8	0.0	0.0	chr13	67111377	67111398	(47252930)	+	(ACAA)n	Simple_repeat	1	22	(0)	1061865
18	9.2	2.7	2.6	chr13	71713073	71713112	(42651216)	+	(TTCTT)n	Simple_repeat	1	40	(0)	1067816
289	27.7	10.5	0.8	chr13	74040216	74040335	(40323993)	C	L2a	LINE/L2	(5)	3421	3289	1071406
247	34.0	4.5	3.3	chr13	74040866	74041017	(40323311)	+	L2	LINE/L2	2541	2694	(725)	1071407
42	0.0	0.0	0.0	chr13	77478144	77478179	(36886149)	+	(AC)n	Simple_repeat	1	36	(0)	1076267
328	33.7	5.7	6.4	chr13	79392687	79393092	(34971236)	+	L1MEf	LINE/L1	34	436	(5987)	1078856
1340	15.7	1.3	2.1	chr13	79393292	79393526	(34970802)	+	MER50	LTR/ERV1	479	711	(23)	1078857
6021	14.9	11.4	0.2	chr13	79393528	79394632	(34969696)	+	MER50-int	LTR/ERV1	1	1231	(5974)	1078857
683	32.5	8.7	2.3	chr13	87124037	87124421	(27239907)	C	MamRTE1	LINE/RTE-BovB	(100)	3712	3301	1088601
4377	18.2	3.8	0.4	chr13	95651376	95652261	(18712067)	+	L1MCa	LINE/L1	2265	3180	(3141)	1100488
3235	16.7	1.7	1.7	chr14	32799270	32799927	(74243791)	C	L1MCa	LINE/L1	(2957)	3364	2707	1145606
899	12.8	0.0	0.0	chr14	32799928	32800044	(74243674)	+	AluSz6	SINE/Alu	1	117	(195)	1145607
16	0.0	0.0	0.0	chr14	32800045	32800062	(74243656)	+	(CT)n	Simple_repeat	1	18	(0)	1145608
98	18.4	0.6	0.0	chr14	32800062	32800243	(74243475)	+	(TA)n	Simple_repeat	1	183	(0)	1145609
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
355	31.9	13.8	0.5	chr14	100476043	100476256	(6567462)	C	MIRb	SINE/MIR	(0)	268	22	1251925
285	32.0	13.2	1.5	chr14	100476592	100476791	(6566927)	+	MIRb	SINE/MIR	28	254	(14)	1251926
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
1061	27.0	4.1	1.0	chr15	28289488	28289847	(73701342)	+	LTR80A	LTR/ERVL	4	373	(210)	1273615
408	30.2	1.2	6.4	chr15	28290018	28290190	(73700999)	+	LTR80A	LTR/ERVL	420	583	(0)	1273615
239	26.3	8.3	2.0	chr15	28290191	28290291	(73700898)	+	L1MD	LINE/L1	2551	2658	(3488)	1273616
397	16.7	0.0	0.0	chr15	28290303	28290362	(73700827)	C	Alu	SINE/Alu	(9)	292	233	1273617
1247	12.2	0.0	0.0	chr15	28290365	28290528	(73700661)	C	AluSx1	SINE/Alu	(147)	165	2	1273618
1545	20.0	8.9	6.2	chr15	56361580	56362027	(45629162)	+	MLT1C	LTR/ERVL-MaLR	2	462	(5)	1317023
2528	16.1	3.8	0.6	chr15	56362028	56362509	(45628680)	C	L1MC	LINE/L1	(3368)	2778	2281	1317021
560	16.5	0.0	4.9	chr15	64564214	64564315	(37426874)	+	Tigger7	DNA/TcMar-Tigger	2395	2491	(0)	1330662
1991	14.3	0.3	3.3	chr15	67634091	67634397	(34356792)	+	AluJb	SINE/Alu	15	312	(0)	1336930
2397	20.6	13.7	3.1	chr15	67634398	67635182	(34356007)	C	L1MEc	LINE/L1	(3471)	2848	1930	1336929
2372	10.9	0.0	0.0	chr15	68604834	68605135	(33386054)	+	AluSg	SINE/Alu	1	302	(8)	1338656
1581	26.6	2.8	1.6	chr15	68605239	68605666	(33385523)	+	L1ME4c	LINE/L1	296	728	(102)	1338657
493	31.0	10.8	3.6	chr15	68605674	68605711	(33385478)	C	L2	LINE/L2	(817)	2602	2566	1338658
2052	10.6	0.0	1.1	chr15	68605712	68606023	(33385166)	C	AluSg	SINE/Alu	(0)	310	1	1338659
4205	23.4	11.9	2.8	chr15	69189999	69191326	(32799863)	C	L1MEc	LINE/L1	(3155)	3164	1657	1339791
1371	34.6	6.7	5.1	chr15	70270839	70271841	(31719348)	+	ERVL-B4-int	LTR/ERVL	4184	5277	(437)	1341830
5919	21.2	6.8	5.4	chr15	72766723	72768410	(29222779)	+	L1MEc	LINE/L1	2035	3774	(2545)	1346049
185	35.2	3.3	3.3	chr15	77699788	77699878	(24291311)	+	L2c	LINE/L2	3293	3383	(4)	1354494
2322	24.1	11.7	2.2	chr15	95702907	95704634	(6286555)	C	L1MCa	LINE/L1	(3365)	3199	1245	1384832
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
349	23.1	2.3	7.8	chr16	81874118	81874258	(8464087)	+	MER102a	DNA/hAT-Charlie	63	195	(135)	1528246
561	26.7	4.4	4.4	chr17	4565515	4565718	(78691723)	+	MLT1N2	LTR/ERVL-MaLR	359	562	(0)	1553318
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
2291	9.7	0.0	0.0	chr17	58678873	58679171	(24578270)	+	AluSq2	SINE/Alu	2	300	(13)	1645510
300	23.6	12.9	12.1	chr17	58679172	58679272	(24578169)	+	MLT1D	LTR/ERVL-MaLR	199	292	(213)	1645507
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
441	33.4	15.2	1.2	chr17	59514501	59514821	(23742620)	+	LTR89	LTR/ERVL?	264	637	(242)	1647414
1387	24.2	5.6	5.2	chr17	67834197	67834679	(15422762)	C	L1M5	LINE/L1	(3280)	2866	2382	1662916
205	24.4	8.0	7.3	chr17	67834695	67834831	(15422610)	+	L2c	LINE/L2	3248	3385	(2)	1662917
599	15.6	11.4	13.9	chr17	67834867	67834930	(15422511)	C	MER3	DNA/hAT-Charlie	(0)	209	147	1662918
121	22.7	0.4	8.2	chr17	80929972	80930312	(2327129)	+	(CTCAG)n	Simple_repeat	1	313	(0)	1685673
32	10.5	0.0	6.5	chr17	80930313	80930405	(2327036)	+	(CAGCT)n	Simple_repeat	1	93	(0)	1685674
121	22.7	0.4	8.2	chr17	80930406	80930537	(2326904)	+	(CTCAG)n	Simple_repeat	4	127	(0)	1685675
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
4870	18.4	2.6	3.4	chr18	33517860	33518793	(46854492)	+	L1MEg	LINE/L1	2501	3436	(2885)	1730838
3100	23.7	9.2	1.0	chr18	38818082	38819321	(41553964)	+	L1MC3	LINE/L1	2085	3437	(2884)	1737884
5003	16.8	4.2	2.5	chr18	46888903	46889853	(33483432)	+	L1MB3	LINE/L1	4805	5784	(387)	1749403
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2313	9.3	0.0	0.0	chr19	8618374	8618662	(49998954)	C	AluSx1	SINE/Alu	(3)	309	21	1815728
2090	12.0	0.0	2.0	chr19	8618663	8618961	(49998655)	C	AluY	SINE/Alu	(16)	295	3	1815729
1895	15.4	1.3	1.7	chr19	8618966	8619264	(49998352)	C	AluJr	SINE/Alu	(10)	302	5	1815730
1726	22.3	6.0	3.2	chr19	40057066	40057775	(18559841)	+	L1MEc	LINE/L1	2268	3001	(3318)	1870173
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
408	28.6	6.0	4.8	chr19	43425780	43425926	(15191690)	C	L2a	LINE/L2	(586)	2833	2685	1876713
3406	15.9	0.4	0.2	chr19	43425932	43426466	(15191150)	+	MER66C	LTR/ERV1	6	541	(14)	1876716
424	12.1	0.0	14.3	chr19	45370871	45370961	(13246655)	+	FLAM_A	SINE/Alu	55	132	(10)	1881119
218	33.9	9.7	3.0	chr19	47113944	47114077	(11503539)	C	MIRb	SINE/MIR	(57)	211	68	1885282
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
453	29.4	3.5	3.0	chr2	11584031	11584198	(230609331)	C	MER5B	DNA/hAT-Charlie	(2)	176	8	1926915
1952	17.0	0.3	0.7	chr2	26355746	26356039	(215837490)	C	AluJb	SINE/Alu	(17)	295	3	1949813
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
1127	11.6	0.3	0.0	chr2	132286523	132287784	(109905745)	C	ACRO1	Satellite/acro	(55)	1265	1	2104358
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
5612	18.2	3.6	2.4	chr2	172709568	172710637	(69482892)	+	Tigger6a	DNA/TcMar-Tigger	1	1083	(0)	2160572
186	21.2	0.0	0.0	chr2	172710971	172711003	(69482526)	C	L3	LINE/CR1	(23)	4076	4044	2160573
259	18.3	4.8	0.0	chr2	172711041	172711100	(69482429)	C	CR1_Mam	LINE/CR1	(474)	1730	1668	2160574
4830	24.9	7.9	5.4	chr2	184549078	184550301	(57643228)	+	L1MC	LINE/L1	2384	3603	(2543)	2176698
24	12.6	0.0	0.0	chr2	196987961	196987996	(45205533)	+	(GA)n	Simple_repeat	1	36	(0)	2193213
249	29.2	7.8	0.0	chr2	231196606	231196711	(10996818)	+	MIRc	SINE/MIR	24	138	(130)	2246394
1969	16.8	0.6	3.4	chr2	231196725	231197076	(10996453)	C	MER92C	LTR/ERV1	(248)	342	1	2246395
283	22.4	18.7	7.5	chr20	708571	708731	(63735436)	C	MIR	SINE/MIR	(17)	245	71	2263566
3287	16.1	3.2	1.0	chr20	708848	709423	(63734744)	+	MER92C	LTR/ERV1	1	589	(1)	2263567
217	34.6	8.5	5.2	chr20	709452	709643	(63734524)	+	MIR	SINE/MIR	63	261	(1)	2263564
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
312	21.5	5.8	0.0	chr21	9248928	9248992	(37460991)	+	AluJb	SINE/Alu	225	293	(19)	2374343
76	18.0	0.0	0.0	chr21	9248994	9249134	(37460849)	+	(AATGG)n	Simple_repeat	1	141	(0)	2374344
2558	6.4	0.9	0.0	chr21	9249136	9249479	(37460504)	+	L1P1	LINE/L1	3726	4072	(2074)	2374345
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
627	27.0	2.1	1.6	chr21	9257721	9257908	(37452075)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2374356
4267	17.6	2.5	2.2	chr21	9371294	9372433	(37337550)	C	L1PA16	LINE/L1	(1)	6165	5026	2374477
2035	12.7	0.7	0.0	chr21	9800444	9800751	(36909232)	C	AluSz	SINE/Alu	(2)	310	1	2374873
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
5929	13.6	4.5	2.0	chr21	10363290	10364171	(36345812)	C	L1MA2	LINE/L1	(1820)	4326	3409	2375401
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
5479	19.2	6.3	1.0	chr21	34805053	34807193	(11902790)	+	L1MCa	LINE/L1	1244	3639	(2925)	2407208
13	9.8	0.0	0.0	chr21	37060460	37060481	(9649502)	+	(GCA)n	Simple_repeat	1	22	(0)	2410949
2544	26.1	6.7	1.7	chr21	43198040	43199908	(3510075)	+	L1MEc	LINE/L1	1297	3673	(3333)	2420054
437	36.7	2.4	1.0	chr21	43200083	43200374	(3509609)	C	L1MC5a	LINE/L1	(7)	2770	2475	2420056
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1112	22.6	14.0	1.8	chr22	18099606	18100006	(32718462)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	7	2430227
2131	14.4	0.3	0.0	chr22	18100069	18100374	(32718094)	C	AluSq2	SINE/Alu	(6)	307	1	2430228
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
513	27.5	13.2	1.2	chr22	37904995	37905167	(12913301)	C	MIRb	SINE/MIR	(52)	216	20	2468376
16	20.7	0.0	4.2	chr22	37905344	37905391	(12913077)	+	(GGCT)n	Simple_repeat	1	48	(0)	2468377
1388	12.8	3.4	1.7	chr22	40663886	40664116	(10154352)	+	ERVL-B4-int	LTR/ERVL	5480	5714	(0)	2474044
2351	21.3	1.1	7.2	chr22	40664121	40664220	(10154248)	+	MLT2B3	LTR/ERVL	5	104	(450)	2474044
1946	12.0	0.7	3.8	chr22	40664221	40664397	(10154071)	C	AluSx1	SINE/Alu	(0)	312	144	2474050
2453	9.2	0.0	0.0	chr22	42779843	42780148	(8038320)	+	AluSq2	SINE/Alu	2	307	(6)	2478930
363	20.7	4.3	0.0	chr22	42780489	42780599	(8037869)	C	BLACKJACK	DNA/hAT-Blackjack	(301)	2668	2553	2478931
2664	27.2	6.6	3.2	chr22	47079493	47080820	(3737648)	+	L1ME3B	LINE/L1	1997	3375	(2944)	2486409
3526	22.5	3.2	4.4	chr3	11110257	11111394	(187184165)	C	L1ME1	LINE/L1	(569)	5610	4493	2510762
1907	24.5	9.9	3.6	chr3	11111389	11112033	(187183526)	C	L1MEf	LINE/L1	(3085)	3061	2331	2510758
911	30.7	11.7	3.4	chr3	63959861	63960678	(134334881)	C	L2a	LINE/L2	(0)	3426	2529	2594962
1262	31.9	11.3	0.5	chr3	75859256	75859901	(122435658)	+	L2	LINE/L2	916	1640	(1779)	2614783
3041	22.4	4.3	2.5	chr3	140997741	140998616	(57296943)	+	L1M5	LINE/L1	2239	3266	(2880)	2701608
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
1346	26.2	2.2	6.9	chr3	157561783	157562393	(40733166)	C	L1ME1	LINE/L1	(3311)	3008	2427	2725664
4814	25.5	8.0	2.5	chr3	174509895	174512365	(23783194)	C	L1MC5a	LINE/L1	(2138)	4181	1558	2749080
2521	22.6	7.1	5.0	chr3	185125432	185126055	(13169504)	+	L1ME1	LINE/L1	5818	6423	(1808)	2765804
3813	22.1	4.9	4.8	chr3	194288624	194292034	(4003525)	+	L1MD2	LINE/L1	3	6333	(11)	2780884
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
2316	17.6	12.5	7.1	chr4	22533986	22534475	(167680080)	+	MLT2B1	LTR/ERVL	1	520	(0)	2824113
1723	18.0	3.8	5.4	chr4	22534490	22534859	(167679696)	+	MER92C	LTR/ERV1	227	590	(0)	2824114
1691	17.9	0.9	0.1	chr4	38467266	38467585	(151746970)	+	L1MC	LINE/L1	2418	2742	(3404)	2847828
490	29.9	2.0	2.0	chr4	42074538	42074687	(148139868)	+	MIRc	SINE/MIR	2	151	(117)	2855039
286	33.0	0.9	2.6	chr4	42074711	42074825	(148139730)	C	MIRb	SINE/MIR	(13)	255	143	2855040
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
284	31.6	13.6	0.7	chr4	56387675	56387827	(133826728)	+	MIRc	SINE/MIR	32	207	(61)	2872524
331	32.7	13.4	4.8	chr4	133418638	133419332	(56795223)	C	L2a	LINE/L2	(2)	3424	2665	2976954
656	35.6	12.5	3.9	chr4	148007544	148008309	(42206246)	C	L3	LINE/CR1	(41)	4058	3218	2996579
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
14	16.4	2.9	0.0	chr5	88729671	88729704	(92808555)	+	A-rich	Low_complexity	1	35	(0)	3172712
1697	24.3	4.1	6.9	chr5	92784620	92785061	(88753198)	+	L1MCa	LINE/L1	2526	2952	(3369)	3177893
3671	18.8	2.5	4.9	chr5	92785086	92785198	(88753061)	+	L1MCa	LINE/L1	3665	3759	(2562)	3177893
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
2474	6.9	0.0	4.1	chr5	139173666	139173983	(42364276)	+	AluY	SINE/Alu	2	306	(5)	3240215
2887	18.5	3.1	9.1	chr5	139173984	139174217	(42364042)	+	L1M4c	LINE/L1	3280	3489	(2887)	3240195
1675	17.4	6.5	0.0	chr5	139174218	139174492	(42363767)	+	AluJo	SINE/Alu	1	294	(18)	3240216
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
387	16.2	2.9	0.0	chr5	181473430	181473497	(64762)	+	MLT2B3	LTR/ERVL	3	72	(482)	3314297
359	19.1	2.9	0.0	chr5	181473523	181473590	(64669)	+	MLT2B3	LTR/ERVL	3	72	(482)	3314297
354	19.1	2.9	0.0	chr5	181473616	181473683	(64576)	+	MLT2B3	LTR/ERVL	3	72	(482)	3314297
322	20.6	2.9	0.0	chr5	181473709	181473776	(64483)	+	MLT2B3	LTR/ERVL	3	72	(482)	3314297
15	18.2	2.1	4.2	chr6	1388002	1388048	(169417931)	+	(CCACC)n	Simple_repeat	1	48	(0)	3316034
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
2346	8.3	1.0	1.3	chr6	31864064	31864375	(138941604)	C	AluSx1	SINE/Alu	(1)	311	1	3364053
2120	12.7	0.3	1.3	chr6	40399424	40399737	(130406242)	C	AluSx3	SINE/Alu	(0)	311	1	3379386
935	24.0	6.4	17.0	chr6	40399738	40399801	(130406178)	+	LTR33A	LTR/ERVL	456	520	(0)	3379385
321	29.5	1.9	0.9	chr6	40399822	40399927	(130406052)	C	Charlie22a	DNA/hAT-Charlie	(352)	139	33	3379384
285	23.1	0.0	13.3	chr6	40400177	40400266	(130405713)	+	L2c	LINE/L2	3295	3372	(15)	3379387
1714	27.1	5.9	3.2	chr6	63598416	63598975	(107207004)	C	LTR33C	LTR/ERVL	(29)	600	25	3410846
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
3092	27.9	7.4	4.1	chr6	121663980	121665097	(49140882)	C	L2a	LINE/L2	(176)	3250	2105	3489407
37	0.0	2.9	0.0	chr6	133243090	133243124	(37562855)	+	(GT)n	Simple_repeat	1	36	(0)	3504978
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
7380	19.5	2.7	2.8	chr7	4352029	4353650	(154992323)	C	L1MB3	LINE/L1	(815)	5325	3706	3564638
1435	24.3	4.6	4.8	chr7	5051196	5051783	(154294190)	C	L1MC4	LINE/L1	(1)	8041	7455	3566119
2412	22.0	8.9	2.7	chr7	5051798	5052741	(154293232)	C	L1MEc	LINE/L1	(3404)	2915	1928	3566121
1945	20.4	3.0	5.2	chr7	29996434	29996950	(129349023)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3602457
6973	25.6	8.2	1.5	chr7	29996951	29997579	(129348394)	C	L1MEc	LINE/L1	(3188)	3131	2336	3602453
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
19	4.5	0.0	0.0	chr7	84194791	84194813	(75151160)	+	(A)n	Simple_repeat	1	23	(0)	3683241
52	2.1	0.0	0.0	chr7	84195005	84195053	(75150920)	+	(AG)n	Simple_repeat	1	49	(0)	3683242
1026	25.2	0.7	1.7	chr7	86132887	86133184	(73212789)	C	L1MC	LINE/L1	(3222)	2924	2630	3685601
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
4512	15.9	6.2	6.0	chr7	128568769	128569832	(30776141)	C	L1MB2	LINE/L1	(39)	6132	5045	3747550
2460	10.4	1.3	0.0	chr7	128569833	128570139	(30775834)	C	AluSx1	SINE/Alu	(0)	312	2	3747552
4298	22.4	11.7	7.8	chr7	150927934	150929968	(8416005)	+	L1MC5	LINE/L1	6771	8713	(591)	3782664
2595	16.1	0.6	5.7	chr7	151651629	151651747	(7694226)	+	Charlie1a	DNA/hAT-Charlie	873	975	(480)	3783833
252	9.4	0.0	0.0	chr7	151651748	151651779	(7694194)	C	L1MA7	LINE/L1	(429)	5862	5831	3783835
1985	15.9	7.1	1.7	chr7	151651773	151652174	(7693799)	+	L1MA7	LINE/L1	5860	6284	(7)	3783835
1234	23.3	5.9	6.5	chr7	151968705	151969392	(7376581)	C	L1M3	LINE/L1	(595)	5584	4932	3784340
2426	20.3	3.9	7.0	chr7	151969393	151969798	(7376175)	C	LTR71B	LTR/ERV1	(0)	610	199	3784341
2394	10.3	11.7	0.5	chr7	158594718	158595097	(750876)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3793407
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
20234	9.7	0.2	0.5	chr8	85650406	85654067	(59484569)	C	L1PA5	LINE/L1	(2)	6152	2507	3914920
298	29.0	3.1	1.6	chr8	85659943	85660068	(59478568)	C	L1ME4b	LINE/L1	(0)	892	765	3914925
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
2294	10.6	1.4	0.3	chr8	94681657	94681949	(50456687)	+	AluSx4	SINE/Alu	1	296	(14)	3927346
2012	17.9	0.0	0.0	chr8	94682366	94682666	(50455970)	C	AluJo	SINE/Alu	(11)	301	1	3927347
2251	23.9	9.0	3.8	chr8	115166008	115167546	(29971090)	+	L1MB3	LINE/L1	2058	3715	(3133)	3958321
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
1751	18.8	2.1	1.3	chr9	86107138	86107515	(52287202)	+	L1MA4	LINE/L1	5863	6243	(57)	4107316
259	29.9	18.6	2.0	chr9	92765544	92765600	(45629117)	C	L1MC4	LINE/L1	(191)	7851	7791	4117180
2677	19.9	11.5	0.0	chr9	92765601	92766169	(45628548)	+	MER73	LTR/ERVL	2	644	(0)	4117181
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
283	32.1	1.2	6.9	chrX	54787218	54787391	(101253504)	+	L2b	LINE/L2	2999	3162	(213)	4446366
2593	21.1	1.8	11.3	chrX	103210458	103211127	(52829768)	C	MER21A	LTR/ERVL	(117)	814	210	4498282
2778	12.6	7.9	0.9	chrX	103211158	103211605	(52829290)	+	MER66C	LTR/ERV1	61	542	(13)	4498283
2230	7.4	0.0	1.5	chrX	133057867	133058164	(22982731)	C	AluY	SINE/Alu	(0)	311	17	4540281
4420	19.1	5.7	3.0	chrX	133058165	133058801	(22982094)	C	L1MCa	LINE/L1	(3375)	2946	2260	4540280
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165