12	23.5	1.8	5.4	chr1	8703038	8703092	(240253330)	+	(GGCCGCT)n	Simple_repeat	1	56	(0)	12084
112	18.9	0.4	1.7	chr1	9142540	9142559	(239813863)	+	(TTCC)n	Simple_repeat	1	20	(0)	13025
2089	10.3	2.6	3.2	chr1	9142560	9142871	(239813551)	C	AluSz	SINE/Alu	(2)	310	1	13026
545	20.4	0.0	0.0	chr1	16292912	16293004	(232663418)	+	AluJb	SINE/Alu	216	308	(4)	27126
1843	9.7	9.4	0.0	chr1	16293161	16293419	(232663003)	C	AluSx1	SINE/Alu	(25)	287	2	27127
351	24.1	0.0	1.2	chr1	28249719	28249798	(220706624)	+	L2b	LINE/L2	3296	3374	(1)	53652
336	23.1	11.4	1.3	chr1	28249870	28250027	(220706395)	+	MamRep605	LTR?	445	620	(229)	53653
2570	4.2	0.3	0.7	chr1	28329281	28329587	(220626835)	C	AluSp	SINE/Alu	(7)	306	1	53911
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
1491	16.6	5.7	8.2	chr1	28649355	28649386	(220307036)	+	L1M4	LINE/L1	4963	4993	(1153)	54784
2455	7.6	0.3	0.3	chr1	28649387	28649689	(220306733)	+	AluSp	SINE/Alu	1	303	(10)	54785
1027	13.8	9.3	19.6	chr1	41234153	41234453	(207721969)	+	AluJr4	SINE/Alu	1	271	(41)	80396
2227	7.3	0.0	2.4	chr1	41234454	41234772	(207721650)	C	AluY	SINE/Alu	(0)	311	2	80397
344	27.9	11.2	5.9	chr1	42052403	42052604	(206903818)	+	UCON99	DNA	114	327	(44)	81862
304	21.4	4.1	0.0	chr1	42283815	42283884	(206672538)	+	MLT1J	LTR/ERVL-MaLR	1	73	(439)	82225
475	23.9	4.1	14.7	chr1	42283903	42284093	(206672329)	+	MLT1J	LTR/ERVL-MaLR	237	406	(106)	82225
990	14.0	4.3	0.6	chr1	42690063	42690219	(206266203)	+	AluSz6	SINE/Alu	129	291	(21)	82986
19	14.5	0.0	0.0	chr1	42690230	42690260	(206266162)	+	(T)n	Simple_repeat	1	31	(0)	82987
2065	10.1	0.0	1.8	chr1	52766110	52766385	(196190037)	C	AluSx4	SINE/Alu	(6)	304	34	101692
1847	20.6	11.4	5.9	chr1	52766386	52766708	(196189714)	C	L1MDa	LINE/L1	(5369)	1264	935	101691
2462	6.5	0.3	0.0	chr1	52766727	52767019	(196189403)	+	AluY	SINE/Alu	1	294	(17)	101693
2177	10.5	1.7	3.0	chr1	52946776	52947079	(196009343)	+	AluSx1	SINE/Alu	2	301	(11)	102154
847	18.0	4.8	1.9	chr1	52947101	52947261	(196009161)	+	AluJr	SINE/Alu	137	302	(10)	102155
274	20.4	15.0	5.3	chr1	52947303	52947452	(196008970)	C	HAL1	LINE/L1	(110)	2397	2231	102156
371	30.1	5.0	2.2	chr1	54763837	54764042	(194192380)	C	MIRc	SINE/MIR	(50)	212	3	105839
346	29.9	4.3	5.4	chr1	54764061	54764226	(194192196)	+	MIR3	SINE/MIR	45	208	(0)	105840
188	33.5	5.5	10.1	chr1	54764221	54764409	(194192013)	C	MIRc	SINE/MIR	(72)	196	17	105841
422	33.4	10.2	3.9	chr1	57756142	57756746	(191199676)	C	L2a	LINE/L2	(1)	3425	2643	111463
372	33.3	3.6	1.5	chr1	57756722	57756858	(191199564)	C	MIRb	SINE/MIR	(125)	143	4	111464
17	17.8	0.0	2.4	chr1	58358386	58358426	(190597996)	+	A-rich	Low_complexity	1	41	(0)	112697
2251	24.4	4.0	0.8	chr1	60489651	60490134	(188466288)	+	L1M3de	LINE/L1	82	581	(6072)	116623
27539	2.8	0.3	0.1	chr1	60490133	60496149	(188460273)	+	L1PA3	LINE/L1	126	6155	(0)	116624
24	12.1	0.0	0.0	chr1	61453444	61453479	(187502943)	+	(T)n	Simple_repeat	1	36	(0)	118160
28	13.7	0.0	4.8	chr1	65310202	65310263	(183646159)	+	G-rich	Low_complexity	1	62	(0)	125554
186	25.0	7.7	0.0	chr1	67713731	67713790	(181242632)	+	MIR	SINE/MIR	111	175	(87)	129452
15	4.7	0.0	0.0	chr1	76626092	76626113	(172330309)	+	(AGC)n	Simple_repeat	1	22	(0)	141700
240	30.4	0.0	0.0	chr1	76626202	76626257	(172330165)	+	Plat_L3	LINE/CR1	2541	2596	(990)	141701
1728	25.3	3.9	0.2	chr1	86361108	86361523	(162594899)	C	LTR40b	LTR/ERVL	(5)	457	26	155484
21	23.3	0.0	0.0	chr1	88683885	88683929	(160272493)	+	A-rich	Low_complexity	1	45	(0)	158815
1759	21.8	3.8	1.4	chr1	93845590	93846003	(155110419)	+	LTR40c	LTR/ERVL	29	452	(13)	166923
249	30.6	2.7	8.4	chr1	93846011	93846177	(155110245)	+	MIR	SINE/MIR	58	225	(43)	166924
2153	13.5	0.3	1.0	chr1	100350912	100351222	(148605200)	+	AluSz6	SINE/Alu	1	309	(3)	176445
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
1766	11.1	20.1	3.6	chr1	105101238	105101621	(143854801)	C	MER4C	LTR/ERV1	(2)	463	1	182443
265	24.6	2.8	1.4	chr1	112819058	112819127	(136137295)	C	MIRc	SINE/MIR	(32)	236	166	193837
341	22.8	3.0	6.6	chr1	112819286	112819421	(136137001)	+	Tigger19a	DNA/TcMar-Tigger	106	236	(87)	193838
523	14.9	10.2	10.8	chr1	112819668	112819760	(136136662)	C	L1MD3	LINE/L1	(11)	7984	7887	193839
2376	6.0	0.0	1.1	chr1	112819761	112820070	(136136352)	C	AluY	SINE/Alu	(0)	311	1	193840
18	0.0	0.0	0.0	chr1	113771811	113771830	(135184592)	+	(A)n	Simple_repeat	1	20	(0)	195485
279	23.8	5.9	1.2	chr1	113772123	113772203	(135184219)	+	HAL1ME	LINE/L1	2045	2129	(336)	195483
387	27.1	9.4	5.6	chr1	113786898	113787163	(135169259)	C	L1M5	LINE/L1	(1384)	4762	4486	195515
323	27.3	6.7	7.8	chr1	113787223	113787389	(135169033)	+	L1MEi	LINE/L1	1	165	(2342)	195516
1239	26.2	11.7	10.3	chr1	113787595	113788704	(135167718)	+	L1MEi	LINE/L1	492	1572	(935)	195516
18	12.2	0.0	0.0	chr1	114717305	114717331	(134239091)	+	(T)n	Simple_repeat	1	27	(0)	197166
634	2.7	0.0	0.0	chr1	143735919	143735993	(105220429)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	208265
701	1.3	0.0	0.0	chr1	144419267	144419341	(104537081)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	209379
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
24	3.5	0.0	0.0	chr1	150009942	150009970	(98946452)	+	(CA)n	Simple_repeat	1	29	(0)	218140
2019	8.5	0.0	0.0	chr1	150931304	150931550	(98024872)	+	AluY	SINE/Alu	1	247	(64)	220148
596	0.0	0.0	0.0	chr1	150931551	150931620	(98024802)	+	L1PA2	LINE/L1	6082	6151	(4)	220149
29	15.9	0.0	0.0	chr1	150931623	150931671	(98024751)	+	A-rich	Low_complexity	1	49	(0)	220150
467	9.7	0.0	4.0	chr1	150931672	150931746	(98024676)	+	AluY	SINE/Alu	231	302	(9)	220148
1283	18.8	5.8	3.0	chr1	150931749	150932082	(98024340)	C	L1M4	LINE/L1	(2053)	4093	3750	220145
806	16.3	0.0	0.0	chr1	150932088	150932221	(98024201)	+	AluJb	SINE/Alu	1	221	(81)	220151
2196	12.4	0.0	0.3	chr1	151300657	151300963	(97655459)	C	7SLRNA	srpRNA	(13)	307	2	220925
2171	11.6	2.3	1.7	chr1	151301210	151301382	(97655040)	C	AluSg4	SINE/Alu	(6)	304	135	220926
230	18.2	0.0	0.0	chr1	153568410	153568453	(95387969)	+	MIR3	SINE/MIR	67	110	(98)	224297
945	11.8	4.1	2.1	chr1	154183853	154184024	(94772398)	C	AluJo	SINE/Alu	(0)	312	136	225628
2115	5.4	4.9	1.4	chr1	154184038	154184315	(94772107)	C	AluY	SINE/Alu	(2)	309	22	225629
2415	8.8	0.0	0.3	chr1	158121177	158121481	(90834941)	+	AluSz	SINE/Alu	5	308	(4)	232707
1657	22.7	3.8	2.9	chr1	161532230	161532642	(87423780)	+	HUERS-P3-int	LTR/ERV1	8480	8896	(23)	237678
4245	12.0	3.5	7.5	chr1	161532665	161533392	(87423030)	+	LTR25	LTR/ERV1	1	697	(147)	237678
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
743	27.3	3.5	0.9	chr1	162079468	162079689	(86876733)	+	MIR	SINE/MIR	7	234	(28)	238566
16	13.7	0.0	0.0	chr1	162696190	162696214	(86260208)	+	(T)n	Simple_repeat	1	25	(0)	239635
20	13.9	7.0	1.6	chr1	164559013	164559069	(84397353)	+	(CCCTCCT)n	Simple_repeat	1	61	(0)	242315
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
17	18.2	0.0	0.0	chr1	164559329	164559359	(84397063)	+	G-rich	Low_complexity	1	31	(0)	242317
28372	2.1	0.1	0.0	chr1	168348863	168354879	(80601543)	C	L1PA2	LINE/L1	(0)	6155	131	248249
258	25.4	0.0	0.0	chr1	179586108	179586166	(69370256)	C	HAL1ME	LINE/L1	(2285)	180	122	265037
20	0.0	0.0	0.0	chr1	179586177	179586198	(69370224)	+	(A)n	Simple_repeat	1	22	(0)	265038
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
1317	27.3	7.0	2.0	chr1	199753411	199753806	(49202616)	+	LTR40a	LTR/ERVL	103	519	(0)	292941
901	29.3	1.2	3.3	chr1	199765866	199766197	(49190225)	+	L1M4a1	LINE/L1	39	363	(6037)	292956
1789	24.0	8.6	5.8	chr1	199766200	199766751	(49189671)	+	L1M4a1	LINE/L1	699	1609	(1143)	292956
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
1679	12.8	5.3	2.7	chr1	202927401	202927696	(46028726)	+	AluJb	SINE/Alu	1	304	(8)	298768
2271	8.1	0.7	1.3	chr1	202927700	202927997	(46028425)	+	AluSz	SINE/Alu	3	298	(14)	298769
254	30.8	0.0	0.0	chr1	202959196	202959260	(45997162)	+	MIRb	SINE/MIR	164	228	(40)	298821
404	13.2	2.6	8.4	chr1	202959286	202959368	(45997054)	C	AluJo	SINE/Alu	(12)	300	223	298822
239	22.8	8.1	4.8	chr1	202959372	202959454	(45996968)	C	MER105	DNA	(93)	110	25	298819
657	29.7	5.7	0.0	chr1	202959459	202959690	(45996732)	+	MIR	SINE/MIR	15	260	(2)	298823
2172	9.9	0.3	1.7	chr1	202967515	202967816	(45988606)	C	AluSz	SINE/Alu	(14)	298	1	298830
1075	32.0	5.8	5.9	chr1	203069320	203070132	(45886290)	C	CR1_Mam	LINE/CR1	(29)	2175	1364	299008
1892	13.8	11.0	1.7	chr1	210346916	210347277	(38609145)	C	L1MA7	LINE/L1	(14)	6277	5878	311016
249	19.8	9.0	13.3	chr1	210347281	210347385	(38609037)	+	MIRc	SINE/MIR	113	212	(56)	311017
12	13.2	5.7	2.7	chr1	211258586	211258620	(37697802)	+	GA-rich	Low_complexity	1	37	(0)	312387
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
227	32.5	8.1	0.0	chr1	214602709	214602822	(34353600)	+	MIRb	SINE/MIR	109	232	(36)	317967
706	23.9	5.8	0.6	chr1	223749496	223749676	(25206746)	+	MIR	SINE/MIR	45	235	(27)	331159
2040	10.2	6.8	1.0	chr1	225580639	225580931	(23375491)	+	AluSz	SINE/Alu	1	311	(1)	334177
1631	24.4	14.3	7.6	chr1	225607680	225608533	(23347889)	+	HAL1	LINE/L1	539	1479	(1028)	334221
1855	17.4	0.3	0.0	chr1	225684603	225684896	(23271526)	C	AluJo	SINE/Alu	(17)	295	1	334382
1915	15.7	0.6	6.3	chr1	225684897	225685009	(23271413)	C	MLT1C	LTR/ERVL-MaLR	(282)	185	78	334379
429	13.3	7.5	9.3	chr1	225685025	225685132	(23271290)	C	MLT1C	LTR/ERVL-MaLR	(361)	106	1	334379
16	5.2	0.0	0.0	chr1	226723565	226723584	(22232838)	+	(GT)n	Simple_repeat	1	20	(0)	336343
1007	28.9	7.0	0.5	chr1	228662990	228663362	(20293060)	+	Cheshire	DNA/hAT-Charlie	1	399	(2021)	339003
458	23.8	8.5	0.0	chr1	228663355	228663526	(20292896)	+	Cheshire	DNA/hAT-Charlie	517	704	(1716)	339004
25	22.6	0.0	0.0	chr1	228663568	228663620	(20292802)	+	(T)n	Simple_repeat	1	53	(0)	339005
2504	9.0	0.0	0.0	chr1	228663621	228663932	(20292490)	C	AluSz	SINE/Alu	(0)	312	1	339006
56	16.4	4.3	6.2	chr1	229411319	229411505	(19544917)	+	(CCCTCTC)n	Simple_repeat	1	195	(0)	340223
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
59	3.5	0.0	0.0	chr1	233904440	233904498	(15051924)	+	(AG)n	Simple_repeat	1	59	(0)	347066
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
12	11.6	3.3	3.2	chr1	233904670	233904699	(15051723)	+	(CGACC)n	Simple_repeat	1	31	(0)	347068
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
1616	22.6	10.2	4.9	chr1	235115668	235116127	(13840295)	+	LTR40a	LTR/ERVL	2	492	(27)	349061
13	18.4	0.0	0.0	chr1	235168616	235168646	(13787776)	+	(GATGAA)n	Simple_repeat	1	31	(0)	349169
2426	8.1	0.0	0.7	chr1	235505383	235505689	(13450733)	C	AluSx1	SINE/Alu	(7)	305	1	349878
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1026	20.1	2.3	6.9	chr1	241990214	241990351	(6966071)	+	MLT1G	LTR/ERVL-MaLR	262	400	(191)	360280
2426	7.4	1.0	0.0	chr1	241990352	241990647	(6965775)	C	AluSc8	SINE/Alu	(8)	303	5	360281
12	22.6	2.3	2.3	chr1	244323303	244323345	(4633077)	+	(TTTC)n	Simple_repeat	1	44	(0)	363972
271	27.7	2.4	0.0	chr1	244323440	244323522	(4632900)	+	MIR	SINE/MIR	178	262	(0)	363967
1432	19.1	8.8	10.3	chr1	245054789	245055226	(3901196)	C	LTR40c	LTR/ERVL	(0)	465	35	365384
2074	14.6	0.0	1.0	chr1	245055329	245055622	(3900800)	C	AluJr	SINE/Alu	(21)	291	1	365385
2363	11.9	1.0	0.3	chr10	8272281	8272583	(125524839)	C	AluSz	SINE/Alu	(7)	305	1	382456
24	16.6	0.0	0.0	chr10	8272605	8272645	(125524777)	+	A-rich	Low_complexity	1	41	(0)	382457
180	35.5	8.3	3.5	chr10	8272675	8272788	(125524634)	+	MIR3	SINE/MIR	48	167	(41)	382458
19	3.8	0.0	0.0	chr10	8272811	8272837	(125524585)	+	(TTTTG)n	Simple_repeat	1	27	(0)	382459
18	0.0	0.0	0.0	chr10	17616645	17616664	(116180758)	+	(A)n	Simple_repeat	1	20	(0)	397751
15	25.3	1.5	4.5	chr10	17616954	17617019	(116180403)	+	(GCCCCCT)n	Simple_repeat	1	67	(0)	397752
2189	11.9	0.3	2.8	chr10	18625431	18625748	(115171674)	+	AluSx1	SINE/Alu	1	310	(2)	399390
648	28.1	1.8	1.3	chr10	18625818	18626044	(115171378)	+	HAL1b	LINE/L1	1389	1616	(805)	399391
312	30.7	15.2	4.6	chr10	18626110	18626257	(115171165)	+	HAL1b	LINE/L1	1672	1858	(563)	399391
951	13.5	0.0	0.0	chr10	18626258	18626390	(115171032)	+	FLAM_C	SINE/Alu	1	133	(10)	399392
516	28.5	10.7	2.4	chr10	19815116	19815320	(113982102)	C	MIR	SINE/MIR	(27)	235	12	401151
408	33.3	0.0	2.2	chr10	26806944	26807124	(106990298)	C	L1MEb	LINE/L1	(5451)	749	573	412331
26	0.0	0.0	0.0	chr10	60141562	60141586	(73655836)	+	(T)n	Simple_repeat	1	25	(0)	456642
504	28.8	9.1	5.5	chr10	61975439	61975692	(71821730)	+	MIRc	SINE/MIR	5	268	(0)	459369
2212	10.9	0.7	0.7	chr10	70170899	70171226	(63626196)	C	AluSz	SINE/Alu	(0)	312	2	472879
3524	7.4	5.1	0.2	chr10	92591083	92591570	(41205852)	+	LTR10D	LTR/ERV1	1	513	(0)	509465
18	0.0	0.0	0.0	chr10	92699842	92699861	(41097561)	+	(A)n	Simple_repeat	1	20	(0)	509686
11	28.6	0.0	0.0	chr10	93880601	93880639	(39916783)	+	(ATAAGTA)n	Simple_repeat	1	39	(0)	511973
2972	13.8	4.3	1.4	chr10	93880666	93881156	(39916266)	C	MER84	LTR/ERV1	(0)	507	2	511974
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
1028	28.7	2.9	1.2	chr10	95273550	95273887	(38523535)	+	L4_C_Mam	LINE/RTE-X	1635	1978	(3160)	513997
359	25.8	0.0	4.7	chr10	95273972	95274077	(38523345)	+	L4_C_Mam	LINE/RTE-X	2165	2265	(2873)	513997
4743	17.2	7.5	1.9	chr10	96890386	96891465	(36905957)	C	L1MB7	LINE/L1	(1817)	4827	3682	516932
2031	11.3	0.3	7.7	chr10	96891483	96891530	(36905892)	C	AluSx	SINE/Alu	(10)	302	270	516935
37	0.0	0.0	0.0	chr10	96891531	96891564	(36905858)	+	(T)n	Simple_repeat	1	34	(0)	516936
2031	11.3	0.3	7.7	chr10	96891565	96891842	(36905580)	C	AluSx	SINE/Alu	(43)	269	1	516935
1829	12.6	0.0	0.4	chr10	102393535	102393795	(31403627)	+	AluSx1	SINE/Alu	1	260	(52)	526852
205	38.3	1.6	12.1	chr10	102393796	102393877	(31403545)	+	L3	LINE/CR1	4013	4084	(15)	526849
238	21.1	2.3	0.7	chr10	110225513	110225572	(23571850)	C	MIR	SINE/MIR	(105)	163	104	539141
242	24.4	7.9	0.0	chr10	110917097	110917178	(22880244)	+	L1MC4	LINE/L1	7544	7632	(410)	540369
22	0.0	0.0	0.0	chr10	110917195	110917218	(22880204)	+	(T)n	Simple_repeat	1	24	(0)	540370
364	29.0	9.1	2.3	chr10	110917243	110917560	(22879862)	+	L1ME2z	LINE/L1	6330	6441	(3)	540371
1778	12.3	1.0	8.2	chr10	113073395	113073710	(20723712)	+	AluJo	SINE/Alu	11	303	(9)	543742
310	29.2	0.0	2.5	chr10	113680752	113680871	(20116551)	+	MIR	SINE/MIR	43	158	(50)	544718
15	21.8	0.0	0.0	chr10	114821988	114822024	(18975398)	+	(GCG)n	Simple_repeat	1	37	(0)	546602
2293	11.0	0.7	0.0	chr10	119756354	119756663	(14040759)	+	AluSx1	SINE/Alu	1	312	(0)	554536
19	0.0	0.0	0.0	chr10	119756866	119756886	(14040536)	+	(A)n	Simple_repeat	1	21	(0)	554537
2204	11.0	2.3	0.0	chr10	119757068	119757367	(14040055)	C	AluSx	SINE/Alu	(5)	307	1	554538
18	12.0	0.0	0.0	chr10	121927328	121927354	(11870068)	+	(T)n	Simple_repeat	1	27	(0)	557958
1024	11.0	0.0	0.0	chr10	125822622	125822757	(7974665)	C	AluSx	SINE/Alu	(176)	136	1	564060
16	19.6	0.0	0.0	chr10	126569910	126569939	(7227483)	+	A-rich	Low_complexity	1	30	(0)	565023
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
2543	6.6	1.9	0.0	chr11	912563	912867	(134173755)	+	AluY	SINE/Alu	1	311	(0)	574082
2390	8.9	0.0	0.3	chr11	3798325	3798626	(131287996)	C	AluSx1	SINE/Alu	(7)	305	5	577722
11	21.8	2.2	4.3	chr11	8329260	8329305	(126757317)	+	G-rich	Low_complexity	1	47	(0)	583844
312	20.9	13.3	0.0	chr11	10934289	10934379	(124152243)	+	MamRep1879	DNA/hAT-Tip100?	13	117	(99)	588409
32	0.0	0.0	0.0	chr11	10934472	10934501	(124152121)	+	(T)n	Simple_repeat	1	30	(0)	588410
809	22.9	0.6	2.4	chr11	17368977	17369163	(117717459)	+	LTR25-int	LTR/ERV1	103	303	(6885)	598649
12	21.8	1.9	5.6	chr11	20387639	20387691	(114698931)	+	(TCGCGC)n	Simple_repeat	1	54	(0)	603849
658	20.0	1.0	0.0	chr11	34468754	34468885	(100617737)	+	FLAM_C	SINE/Alu	2	211	(91)	625313
14	12.7	0.0	0.0	chr11	34468886	34468911	(100617711)	+	(TCAG)n	Simple_repeat	1	26	(0)	625314
26	8.9	0.0	0.0	chr11	46120123	46120158	(88966464)	+	(AC)n	Simple_repeat	1	36	(0)	643307
15	16.0	2.9	0.0	chr11	46120543	46120577	(88966045)	+	G-rich	Low_complexity	1	36	(0)	643308
772	27.6	1.9	6.2	chr11	64405488	64405586	(70681036)	+	MIR	SINE/MIR	1	99	(163)	665558
1742	14.2	1.0	7.9	chr11	64405587	64405796	(70680826)	C	AluJb	SINE/Alu	(5)	307	116	665559
26	0.0	0.0	0.0	chr11	64405797	64405821	(70680801)	+	(T)n	Simple_repeat	1	25	(0)	665560
1742	14.2	1.0	7.9	chr11	64405822	64405940	(70680682)	C	AluJb	SINE/Alu	(197)	115	1	665559
772	27.6	1.9	6.2	chr11	64405941	64406114	(70680508)	+	MIR	SINE/MIR	100	262	(0)	665558
1354	18.2	2.7	1.0	chr11	64917999	64918287	(70168335)	+	MER58B	DNA/hAT-Charlie	48	341	(0)	666433
1820	12.1	10.0	0.4	chr11	64918359	64918630	(70167992)	C	AluSx	SINE/Alu	(11)	301	1	666434
276	32.0	9.5	1.3	chr11	72929778	72929932	(62156690)	+	L2c	LINE/L2	3218	3386	(1)	680865
2056	13.7	16.1	0.3	chr11	72930074	72930461	(62156161)	+	MER65C	LTR/ERV1	1	461	(0)	680867
18	31.1	1.8	0.0	chr11	74988468	74988524	(60098098)	+	(AT)n	Simple_repeat	1	58	(0)	685135
12	21.0	10.0	0.0	chr11	74988963	74989022	(60097600)	+	(GTCTCC)n	Simple_repeat	1	66	(0)	685136
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
657	27.3	2.2	3.8	chr11	107012471	107012653	(28073969)	C	MIRb	SINE/MIR	(85)	183	4	734315
16	17.8	7.2	4.0	chr11	111871300	111871377	(23215245)	+	(CGCCG)n	Simple_repeat	1	80	(0)	742108
1976	14.7	0.0	3.5	chr12	666439	666757	(132608552)	C	AluSz	SINE/Alu	(4)	308	1	779187
954	21.2	1.4	7.0	chr12	666759	666986	(132608323)	C	MER58A	DNA/hAT-Charlie	(9)	215	1	779188
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
1737	15.7	2.9	1.6	chr12	2892857	2893162	(130382147)	C	AluJb	SINE/Alu	(2)	310	1	782856
2171	9.2	2.8	0.0	chr12	2893328	2893610	(130381699)	C	AluSp	SINE/Alu	(12)	301	11	782857
940	11.5	0.0	0.0	chr12	3872817	3872946	(129402363)	+	AluSz6	SINE/Alu	174	303	(9)	784520
12	16.4	5.9	0.0	chr12	3873171	3873204	(129402105)	+	(CCCCG)n	Simple_repeat	1	36	(0)	784521
1732	23.2	7.0	2.8	chr12	6735672	6736292	(126539017)	+	L1MD2	LINE/L1	670	1323	(5317)	789290
2083	10.8	2.6	3.9	chr12	12539769	12540073	(120735236)	+	AluSx1	SINE/Alu	1	301	(11)	798303
1115	12.6	0.8	15.1	chr12	12540074	12540358	(120734951)	+	AluJr	SINE/Alu	66	309	(3)	798304
626	30.3	6.8	0.1	chr12	13043888	13044132	(120231177)	C	MIRb	SINE/MIR	(2)	266	1	799299
300	22.6	5.1	4.1	chr12	13044135	13044231	(120231078)	C	MIRb	SINE/MIR	(69)	199	102	799300
2219	17.7	14.6	3.9	chr12	19438162	19438884	(113836425)	+	Charlie2b	DNA/hAT-Charlie	1784	2597	(185)	808196
233	26.4	4.2	2.1	chr12	19438915	19439007	(113836302)	+	Charlie2a	DNA/hAT-Charlie	2763	2857	(4)	808197
2595	5.3	0.0	0.3	chr12	19862520	19862822	(113412487)	+	AluY	SINE/Alu	2	303	(8)	808864
295	32.3	6.0	11.0	chr12	19862823	19862940	(113412369)	C	L1MEg	LINE/L1	(5947)	137	25	808863
16	0.0	0.0	0.0	chr12	19862957	19862973	(113412336)	+	(A)n	Simple_repeat	1	17	(0)	808865
28	0.0	0.0	0.0	chr12	19862974	19863000	(113412309)	+	(AAAG)n	Simple_repeat	1	27	(0)	808866
6158	22.2	8.2	5.8	chr12	25866379	25867827	(107407482)	+	L1MB8	LINE/L1	74	1578	(5055)	817120
1729	18.8	0.0	0.7	chr12	25867828	25868115	(107407194)	C	AluSz6	SINE/Alu	(18)	294	9	817121
2689	5.2	0.0	0.0	chr12	32060227	32060535	(101214774)	+	AluSg7	SINE/Alu	1	309	(0)	826720
1492	27.5	6.1	4.5	chr12	32060536	32060796	(101214513)	C	MER20B	DNA/hAT-Charlie	(517)	266	1	826717
28	5.8	0.0	0.0	chr12	41917496	41917531	(91357778)	+	(A)n	Simple_repeat	1	36	(0)	835691
206	24.1	6.5	1.7	chr12	41917639	41917697	(91357612)	+	MIRb	SINE/MIR	194	255	(13)	835692
34	0.0	0.0	0.0	chr12	42484012	42484048	(90791261)	+	(A)n	Simple_repeat	1	37	(0)	836701
2152	12.8	1.6	0.3	chr12	45738305	45738609	(87536700)	C	AluSx	SINE/Alu	(2)	310	2	841296
37	0.0	0.0	0.0	chr12	45738780	45738813	(87536496)	+	(T)n	Simple_repeat	1	34	(0)	841297
2264	9.8	0.7	3.3	chr12	45738973	45739278	(87536031)	C	AluSq	SINE/Alu	(15)	298	1	841298
1664	17.0	6.3	2.5	chr12	50664831	50665139	(82610170)	C	AluJo	SINE/Alu	(0)	312	2	849749
2904	14.7	6.6	4.5	chr12	50923860	50924420	(82350889)	C	MER4B	LTR/ERV1	(36)	574	1	850241
24	0.0	0.0	0.0	chr12	50924530	50924555	(82350754)	+	(A)n	Simple_repeat	1	26	(0)	850242
11	29.5	1.6	3.2	chr12	57086554	57086614	(76188695)	+	(TCTTTG)n	Simple_repeat	1	62	(0)	860678
2293	11.0	0.0	0.0	chr12	57487567	57487874	(75787435)	+	AluSx	SINE/Alu	1	308	(4)	861402
2556	12.9	6.4	1.8	chr12	57645652	57646121	(75629188)	+	MER4-int	LTR/ERV1	2791	3291	(3307)	861619
2249	11.0	1.6	0.0	chr12	57646122	57646420	(75628889)	C	AluSp	SINE/Alu	(9)	304	1	861628
18	4.8	0.0	0.0	chr12	66302986	66303007	(66972302)	+	(T)n	Simple_repeat	1	22	(0)	874172
641	1.3	0.0	0.0	chr12	66303008	66303085	(66972224)	C	LTR12C	LTR/ERV1	(339)	1240	1163	874173
19	0.0	0.0	0.0	chr12	66303087	66303107	(66972202)	+	(T)n	Simple_repeat	1	21	(0)	874174
904	17.7	1.2	0.0	chr12	69330827	69330984	(63944325)	C	HERVK22-int	LTR/ERVK	(4348)	2489	2330	879077
3640	14.0	5.0	5.8	chr12	69331227	69331955	(63943354)	C	HERVK22-int	LTR/ERVK	(6078)	759	37	879077
2093	12.2	0.6	1.3	chr12	86725452	86725762	(46549547)	C	AluSx	SINE/Alu	(3)	309	1	903326
34	0.0	0.0	0.0	chr12	106349050	106349081	(26926228)	+	(T)n	Simple_repeat	1	32	(0)	936088
16	8.1	0.0	0.0	chr12	110431443	110431468	(22843841)	+	(AAAAC)n	Simple_repeat	1	26	(0)	944718
16	0.0	0.0	0.0	chr12	110431610	110431627	(22843682)	+	(A)n	Simple_repeat	1	18	(0)	944719
2292	3.5	2.4	3.8	chr12	110431630	110431919	(22843390)	+	AluY	SINE/Alu	1	286	(25)	944720
402	29.3	3.1	7.1	chr12	114656688	114656856	(18618453)	C	MIR	SINE/MIR	(81)	181	20	954226
30	0.0	0.0	0.0	chr12	116165260	116165287	(17110022)	+	(T)n	Simple_repeat	1	28	(0)	957453
2292	10.3	0.3	0.3	chr12	116165329	116165629	(17109680)	C	AluYj4	SINE/Alu	(10)	301	1	957454
2493	16.9	6.8	8.8	chr12	119744822	119745613	(13529696)	+	L1MEc	LINE/L1	1089	1863	(4537)	965419
1185	8.3	1.8	0.0	chr12	119745646	119745813	(13529496)	+	L1MA4	LINE/L1	6126	6296	(4)	965420
309	21.9	13.6	3.4	chr12	120234608	120234725	(13040584)	+	MIRb	SINE/MIR	7	138	(130)	966490
17	0.0	0.0	0.0	chr12	120496742	120496760	(12778549)	+	(T)n	Simple_repeat	1	19	(0)	967224
674	5.1	0.0	0.0	chr12	120692939	120693017	(12582292)	+	AluSq10	SINE/Alu	1	79	(234)	967701
19	0.0	0.0	0.0	chr12	121579990	121580010	(11695299)	+	(A)n	Simple_repeat	1	21	(0)	969719
12	28.7	0.0	0.0	chr12	121580126	121580167	(11695142)	+	A-rich	Low_complexity	1	42	(0)	969720
20	10.8	5.0	0.0	chr12	121580570	121580609	(11694700)	+	G-rich	Low_complexity	1	42	(0)	969721
2279	3.0	0.0	0.0	chr12	121624414	121624678	(11650631)	+	L1PA4	LINE/L1	5888	6152	(3)	969863
280	29.9	5.7	1.2	chr12	123711262	123711430	(9563879)	+	L1ME1	LINE/L1	5905	6081	(98)	974777
1820	13.7	1.1	2.1	chr12	123711467	123711751	(9563558)	+	AluJb	SINE/Alu	9	290	(22)	974778
2007	10.2	0.3	1.4	chr12	123711762	123712046	(9563263)	+	AluSx	SINE/Alu	1	282	(30)	974779
2804	20.9	5.9	1.7	chr12	124838738	124838775	(8436534)	C	L1MB3	LINE/L1	(3)	6180	6139	976949
2420	7.4	0.0	0.7	chr12	124838776	124839074	(8436235)	C	AluSg7	SINE/Alu	(12)	297	1	976950
2433	8.2	0.3	0.0	chr12	124926845	124927147	(8348162)	+	AluSg	SINE/Alu	1	304	(6)	977164
659	0.0	0.0	0.0	chr12	124927345	124927416	(8347893)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977165
29	27.3	2.5	6.0	chr12	132761991	132762152	(513157)	+	(GCGG)n	Simple_repeat	1	166	(0)	989909
439	18.3	1.9	0.9	chr12	132762410	132762514	(512795)	+	AluJb	SINE/Alu	2	107	(205)	989910
291	7.7	0.0	0.0	chr12	132762515	132762553	(512756)	C	MADE1	DNA/TcMar-Mariner	(41)	39	1	989911
911	17.5	0.0	6.2	chr12	132956529	132956705	(318604)	C	AluJo	SINE/Alu	(10)	302	137	990230
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
13	5.2	0.0	0.0	chr13	25046989	25047008	(89317320)	+	(AAT)n	Simple_repeat	1	20	(0)	1001211
2059	13.5	1.3	0.7	chr13	29549666	29549962	(84814366)	C	AluSz	SINE/Alu	(13)	299	1	1008290
303	30.4	0.9	1.7	chr13	29550086	29550202	(84814126)	C	Tigger16b	DNA/TcMar-Tigger	(33)	303	188	1008291
2004	24.4	2.5	2.5	chr13	47998353	47998902	(66365426)	+	L1ME3	LINE/L1	5605	6154	(8)	1036083
217	23.1	18.2	7.1	chr13	47998958	47999083	(66365245)	C	L2c	LINE/L2	(2)	3385	3243	1036084
367	28.3	8.2	1.4	chr13	47999200	47999346	(66364982)	+	L1MC4	LINE/L1	7690	7847	(195)	1036085
232	30.0	10.9	5.8	chr13	49114269	49114406	(65249922)	+	MER5A	DNA/hAT-Charlie	7	152	(37)	1037863
2128	12.1	2.0	0.0	chr13	49606702	49606998	(64757330)	+	AluSz6	SINE/Alu	5	307	(5)	1038681
320	20.7	0.0	0.6	chr13	49607090	49607172	(64757156)	+	MLT1J	LTR/ERVL-MaLR	242	367	(145)	1038682
16	21.7	0.0	0.0	chr13	66958655	66958686	(47405642)	+	(T)n	Simple_repeat	1	32	(0)	1061682
231	30.3	2.9	0.0	chr13	67069564	67069629	(47294699)	C	Tigger19b	DNA/TcMar-Tigger	(240)	310	243	1061824
18	9.2	2.7	2.6	chr13	71713073	71713112	(42651216)	+	(TTCTT)n	Simple_repeat	1	40	(0)	1067816
15	16.9	0.0	0.0	chr13	73683717	73683743	(40680585)	+	(CA)n	Simple_repeat	1	27	(0)	1070941
19	12.4	0.0	0.0	chr13	74134159	74134193	(40230135)	+	(TGGGG)n	Simple_repeat	1	35	(0)	1071556
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
222	26.0	5.5	7.1	chr13	75366284	75366395	(38997933)	+	MIR3	SINE/MIR	88	197	(11)	1073211
1048	17.8	4.0	7.2	chr13	79386075	79386382	(34977946)	C	Charlie1a	DNA/hAT-Charlie	(189)	1266	1037	1078846
18	0.0	0.0	0.0	chr13	79386592	79386611	(34977717)	+	(A)n	Simple_repeat	1	20	(0)	1078848
19	3.8	0.0	0.0	chr13	87123961	87123987	(27240341)	+	(AAAC)n	Simple_repeat	1	27	(0)	1088600
683	32.5	8.7	2.3	chr13	87124037	87124421	(27239907)	C	MamRTE1	LINE/RTE-BovB	(100)	3712	3301	1088601
746	24.4	6.3	8.9	chr13	87124614	87125005	(27239323)	C	MLT2C2	LTR/ERVL	(2)	462	82	1088602
2267	11.9	0.0	0.7	chr13	93684178	93684487	(20679841)	C	AluSq	SINE/Alu	(5)	308	1	1097223
270	29.4	0.0	3.5	chr13	93684637	93684737	(20679591)	+	L2a	LINE/L2	3287	3413	(13)	1097224
190	31.2	2.4	5.9	chr13	93684863	93684947	(20679381)	C	MamRTE1	LINE/RTE-BovB	(2103)	1709	1628	1097225
18	20.9	3.0	4.4	chr13	99980757	99980822	(14383506)	+	GA-rich	Low_complexity	1	68	(0)	1107132
25	22.4	1.3	3.8	chr13	99981084	99981162	(14383166)	+	(CCTCCC)n	Simple_repeat	1	80	(0)	1107133
20	16.7	0.0	0.0	chr13	102847668	102847701	(11516627)	+	(T)n	Simple_repeat	1	34	(0)	1111377
2645	4.8	0.3	0.0	chr13	111066946	111067255	(3297073)	+	AluY	SINE/Alu	1	311	(0)	1122117
1335	31.1	12.2	5.5	chr14	30681583	30682575	(76361143)	C	L4_B_Mam	LINE/RTE-X	(151)	4790	3723	1142163
2387	6.9	0.0	2.4	chr14	37431570	37431884	(69611834)	C	AluY	SINE/Alu	(0)	311	1	1152974
230	25.5	0.0	0.0	chr14	40417803	40417853	(66625865)	C	BLACKJACK	DNA/hAT-Blackjack	(1)	2968	2918	1156853
304	22.1	6.5	1.1	chr14	40417963	40418049	(66625669)	+	LTR50	LTR/ERVL	126	217	(578)	1156854
463	30.3	11.9	1.0	chr14	40418067	40418263	(66625455)	+	LTR50	LTR/ERVL	304	606	(189)	1156854
459	24.2	12.2	1.5	chr14	55598828	55599032	(51444686)	C	L1MEd	LINE/L1	(5804)	1282	1053	1178000
1738	7.8	0.0	5.0	chr14	55599464	55599721	(51443997)	C	AluSx1	SINE/Alu	(11)	301	57	1178001
15	24.0	0.0	0.0	chr14	60657425	60657437	(46386281)	+	A-rich	Low_complexity	1	38	(0)	1185333
13	8.5	4.0	0.0	chr14	60657438	60657462	(46386256)	+	(AAGA)n	Simple_repeat	1	26	(0)	1185334
660	19.6	11.6	0.6	chr14	64292302	64292470	(42751248)	+	L1ME1	LINE/L1	5966	6155	(24)	1190966
19	4.5	0.0	0.0	chr14	70919710	70919732	(36123986)	+	(C)n	Simple_repeat	1	23	(0)	1201979
204	18.2	0.0	4.3	chr14	72905307	72905352	(34138366)	+	L2c	LINE/L2	3342	3385	(2)	1205052
1572	15.4	11.6	0.0	chr14	73794795	73795061	(33248657)	C	AluSz	SINE/Alu	(10)	302	1	1207071
1554	25.1	12.5	2.0	chr14	81191028	81191779	(25851939)	+	L1ME3E	LINE/L1	5320	6161	(81)	1220245
308	31.2	6.1	2.8	chr14	89167598	89167739	(17875979)	+	L1ME3D	LINE/L1	20	166	(6937)	1231634
779	26.9	9.6	5.6	chr14	89167954	89168331	(17875387)	+	L1ME3D	LINE/L1	576	970	(6133)	1231634
256	32.2	6.1	4.3	chr14	99122571	99122732	(7920986)	C	LTR78	LTR/ERV1	(13)	1291	1127	1249536
645	9.8	0.0	0.0	chr14	99122737	99122818	(7920900)	C	AluSz	SINE/Alu	(230)	82	1	1249537
1671	9.7	0.9	1.3	chr14	99122868	99123093	(7920625)	+	AluSx1	SINE/Alu	83	307	(5)	1249538
32	0.0	0.0	0.0	chr14	99269876	99269910	(7773808)	+	(A)n	Simple_repeat	1	35	(0)	1249749
787	29.0	9.5	4.5	chr14	103409603	103410110	(3633608)	C	L1ME3G	LINE/L1	(297)	627	203	1256769
3885	7.6	3.4	0.0	chr14	105038636	105038946	(2004772)	+	LTR2C	LTR/ERV1	190	500	(1)	1259142
6448	13.7	15.2	12.6	chr14	105038947	105039252	(2004466)	+	MER4-int	LTR/ERV1	3758	4080	(2518)	1259133
2028	10.3	0.7	0.7	chr14	105039253	105039557	(2004161)	C	AluSx	SINE/Alu	(0)	312	11	1259144
640	14.6	13.3	0.8	chr15	50353409	50353539	(51637650)	+	Charlie1b	DNA/hAT-Charlie	130	279	(244)	1307571
2456	8.7	0.3	0.0	chr15	52041186	52041495	(49949694)	C	AluSp	SINE/Alu	(2)	311	1	1310598
232	25.4	6.9	13.0	chr15	66883195	66883282	(35107907)	+	MIRc	SINE/MIR	149	227	(41)	1335650
187	13.3	0.0	0.0	chr15	66883272	66883301	(35107888)	+	L2b	LINE/L2	3332	3361	(14)	1335652
15	21.5	0.0	4.3	chr15	67024405	67024451	(34966738)	+	A-rich	Low_complexity	1	47	(0)	1335907
282	26.9	0.0	2.9	chr15	67024783	67024851	(34966338)	C	L2b	LINE/L2	(1)	3374	3308	1335908
12	8.1	3.6	3.5	chr15	67064627	67064654	(34926535)	+	(TTGTT)n	Simple_repeat	1	29	(0)	1336013
321	30.4	1.9	0.0	chr15	67850965	67851066	(34140123)	+	L2a	LINE/L2	3078	3181	(245)	1337226
1076	17.6	1.1	0.6	chr15	67851070	67851245	(34139944)	+	AluJb	SINE/Alu	134	310	(2)	1337227
1941	13.6	11.6	3.9	chr15	67851261	67851613	(34139576)	+	MSTA	LTR/ERVL-MaLR	1	391	(37)	1337228
19945	10.4	3.6	1.1	chr15	68183715	68185681	(33805508)	+	Tigger3	DNA/TcMar-Tigger	1	2010	(1019)	1337878
18	10.0	2.0	7.8	chr15	68328371	68328420	(33662769)	+	(GGTGGA)n	Simple_repeat	1	51	(0)	1338143
512	22.3	8.6	5.1	chr15	68328577	68328695	(33662494)	+	MER5B	DNA/hAT-Charlie	1	128	(50)	1338144
682	21.9	9.0	0.0	chr15	68328696	68328846	(33662343)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	1338145
512	22.3	8.6	5.1	chr15	68328847	68328882	(33662307)	+	MER5B	DNA/hAT-Charlie	129	162	(16)	1338144
37	29.5	0.0	0.0	chr15	69761265	69761315	(32229874)	+	(ATCC)n	Simple_repeat	1	51	(0)	1340864
1340	7.0	0.0	0.6	chr15	72687125	72687282	(29303907)	C	AluSq2	SINE/Alu	(20)	293	137	1345918
2504	8.9	0.0	0.0	chr15	72687322	72687623	(29303566)	+	AluSz	SINE/Alu	1	302	(10)	1345919
324	27.9	13.5	3.0	chr15	80065038	80065340	(21925849)	C	L1ME3F	LINE/L1	(973)	5173	4826	1358907
2090	13.9	0.4	0.0	chr15	80065538	80065844	(21925345)	C	AluSx	SINE/Alu	(0)	312	1	1358916
181	24.6	8.8	4.0	chr15	80990145	80990220	(21000969)	+	MIR3	SINE/MIR	108	187	(21)	1360491
21	27.9	0.0	0.0	chr15	85381487	85381542	(16609647)	+	(TT)n	Simple_repeat	1	56	(0)	1367730
483	20.6	11.9	11.4	chr15	89017812	89017986	(12973203)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	1373468
456	31.5	5.6	4.5	chr15	90902168	90902294	(11088895)	+	L1ME4c	LINE/L1	410	530	(300)	1377331
17	5.0	0.0	0.0	chr15	96948060	96948080	(5043109)	+	(T)n	Simple_repeat	1	21	(0)	1386577
23	7.0	0.0	0.0	chr15	96948334	96948363	(5042826)	+	(A)n	Simple_repeat	1	30	(0)	1386578
13	23.5	0.0	0.0	chr15	98548717	98548751	(3442438)	+	G-rich	Low_complexity	1	35	(0)	1388808
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
375	21.7	0.0	0.0	chr16	1407924	1407992	(88930353)	+	AluJo	SINE/Alu	1	69	(243)	1395862
908	14.3	0.0	0.0	chr16	1407993	1408125	(88930220)	+	AluSz6	SINE/Alu	171	303	(9)	1395863
17	16.1	0.0	6.4	chr16	4272869	4272915	(86065430)	+	(GGC)n	Simple_repeat	1	47	(0)	1400803
60	1.8	0.0	0.0	chr16	4272948	4273003	(86065342)	+	(GT)n	Simple_repeat	1	56	(0)	1400804
19	30.2	0.0	6.4	chr16	4273125	4273233	(86065112)	+	G-rich	Low_complexity	1	109	(0)	1400805
16	0.0	0.0	0.0	chr16	4273331	4273347	(86064998)	+	(A)n	Simple_repeat	1	17	(0)	1400806
1731	20.4	6.1	9.6	chr16	10278149	10278494	(80059851)	C	LTR40b	LTR/ERVL	(2)	460	133	1413115
2522	8.7	0.0	0.0	chr16	10278495	10278805	(80059540)	C	AluY	SINE/Alu	(0)	311	1	1413116
352	27.4	10.9	6.0	chr16	18843513	18843861	(71494484)	+	L1ME3D	LINE/L1	5701	6068	(174)	1432031
2181	11.0	0.7	1.0	chr16	30558833	30559140	(59779205)	+	AluSx	SINE/Alu	6	312	(0)	1458331
2072	13.9	0.0	1.6	chr16	30657118	30657427	(59680918)	+	AluSx	SINE/Alu	1	305	(7)	1458576
3234	17.6	2.9	3.3	chr16	31868032	31868731	(58469614)	+	L1MA7	LINE/L1	5595	6291	(0)	1460878
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
691	33.3	5.2	2.1	chr16	48329717	48330234	(42008111)	C	L1ME4a	LINE/L1	(226)	5898	5364	1468556
854	19.5	4.1	0.0	chr16	58318504	58318667	(32019678)	+	MER44D	DNA/TcMar-Tigger	1	171	(534)	1486845
2455	8.6	0.0	0.0	chr16	68847718	68848019	(21490326)	+	AluSx	SINE/Alu	1	302	(10)	1504490
14	19.3	2.3	2.3	chr16	69566370	69566412	(20771933)	+	G-rich	Low_complexity	1	44	(0)	1506106
2472	7.0	0.0	0.7	chr16	73082268	73082568	(17255777)	C	AluY	SINE/Alu	(12)	299	1	1512384
15	4.3	0.0	0.0	chr16	73082569	73082580	(17255765)	+	(TGAA)n	Simple_repeat	1	12	(0)	1512385
1674	15.9	5.5	1.1	chr16	75445321	75445596	(14892749)	C	AluJb	SINE/Alu	(23)	289	1	1516811
17	5.0	0.0	0.0	chr16	75445693	75445713	(14892632)	+	(T)n	Simple_repeat	1	21	(0)	1516812
273	15.6	0.0	0.0	chr16	75445715	75445759	(14892586)	C	MER57A1	LTR/ERV1	(64)	368	324	1516813
2437	7.6	0.3	1.0	chr16	75445896	75446199	(14892146)	+	AluSg4	SINE/Alu	1	302	(8)	1516814
272	31.2	9.2	3.7	chr16	81623814	81623976	(8714369)	C	MIR3	SINE/MIR	(18)	190	18	1527650
18	8.3	2.3	6.7	chr16	81624075	81624118	(8714227)	+	(TTTTTCT)n	Simple_repeat	1	45	(0)	1527651
1183	3.5	0.0	0.0	chr16	81624211	81624352	(8713993)	C	L1PA4	LINE/L1	(0)	6155	6014	1527652
876	17.8	11.1	0.6	chr17	4337181	4337349	(78920092)	+	AluJb	SINE/Alu	124	312	(0)	1552788
2445	9.9	0.0	0.0	chr17	4337371	4337683	(78919758)	+	AluSq	SINE/Alu	1	313	(0)	1552789
290	35.2	2.5	5.4	chr17	8249565	8249732	(75007709)	C	L2a	LINE/L2	(0)	3426	3264	1560405
16986	15.6	2.6	2.1	chr17	9509281	9512466	(73744975)	+	L1MA5A	LINE/L1	3069	6272	(1290)	1562846
1615	16.7	6.7	0.0	chr17	9512467	9512729	(73744712)	C	AluSg	SINE/Alu	(15)	295	14	1562849
6632	21.9	8.7	6.5	chr17	12892090	12894063	(70363378)	C	L1ME1	LINE/L1	(4605)	2028	1	1568839
1267	12.7	21.7	0.4	chr17	16386331	16386566	(66870875)	+	AluSz6	SINE/Alu	3	302	(10)	1574868
1106	14.0	0.0	0.0	chr17	16386580	16386743	(66870698)	+	AluJr	SINE/Alu	139	302	(10)	1574869
338	15.5	0.0	6.6	chr17	16387027	16387102	(66870339)	+	AluJb	SINE/Alu	231	301	(1)	1574863
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
2002	13.0	0.3	1.9	chr17	30714786	30715092	(52542349)	+	AluJb	SINE/Alu	5	306	(6)	1593107
774	21.9	13.3	0.0	chr17	30715099	30715281	(52542160)	C	MER58C	DNA/hAT-Charlie	(1)	214	4	1593108
646	26.1	3.4	6.3	chr17	30715368	30715663	(52541778)	+	L2a	LINE/L2	2901	3180	(246)	1593109
2384	7.1	0.0	0.3	chr17	31936291	31936586	(51320855)	+	AluSx3	SINE/Alu	1	295	(16)	1595691
21	24.8	0.0	1.7	chr17	31937083	31937140	(51320301)	+	(CCTTC)n	Simple_repeat	1	58	(0)	1595692
4738	24.2	4.3	8.9	chr17	32580166	32580289	(50677152)	C	L1ME1	LINE/L1	(2069)	4250	4124	1597074
39	0.0	0.0	0.0	chr17	32580290	32580325	(50677116)	+	(T)n	Simple_repeat	1	36	(0)	1597075
4738	24.2	4.3	8.9	chr17	32580326	32580408	(50677033)	C	L1ME1	LINE/L1	(2196)	4123	4040	1597074
2621	7.4	0.0	0.0	chr17	32580409	32580706	(50676735)	C	AluSx3	SINE/Alu	(11)	300	3	1597076
2495	4.3	3.5	0.7	chr17	39451545	39451847	(43805594)	C	AluSq2	SINE/Alu	(1)	312	1	1610119
13	15.0	3.3	0.0	chr17	40068729	40068758	(43188683)	+	(CCT)n	Simple_repeat	1	31	(0)	1611298
14	22.6	4.3	0.0	chr17	42402630	42402656	(40854785)	+	A-rich	Low_complexity	1	53	(0)	1615563
15	14.4	0.0	0.0	chr17	42402657	42402680	(40854761)	+	(A)n	Simple_repeat	1	24	(0)	1615564
1760	11.8	10.5	2.1	chr17	43908453	43908731	(39348710)	+	AluJb	SINE/Alu	1	305	(7)	1618831
197	33.3	7.4	1.1	chr17	46101276	46101363	(37156078)	+	MIRc	SINE/MIR	23	116	(152)	1623374
354	33.3	9.5	0.8	chr17	46166740	46166999	(37090442)	C	L4_A_Mam	LINE/RTE-X	(198)	4792	4508	1623495
19	33.7	0.0	0.0	chr17	46167008	46167068	(37090373)	+	GA-rich	Low_complexity	1	61	(0)	1623496
1274	23.2	9.8	8.5	chr17	46212519	46212997	(37044444)	C	L1ME4a	LINE/L1	(281)	5843	5325	1623588
2305	7.2	0.0	2.9	chr17	46213276	46213288	(37044153)	C	AluY	SINE/Alu	(13)	298	286	1623590
28	0.0	0.0	0.0	chr17	46213289	46213314	(37044127)	+	(TTG)n	Simple_repeat	1	26	(0)	1623591
2305	7.2	0.0	2.9	chr17	46213315	46213607	(37043834)	C	AluY	SINE/Alu	(26)	285	1	1623590
2019	13.4	2.9	0.0	chr17	48954012	48954346	(34303095)	C	LTR47B4	LTR/ERVL	(89)	345	1	1628907
981	14.4	0.6	1.2	chr17	48954347	48954515	(34302926)	C	ERVL47-int	LTR/ERVL	(0)	5246	5079	1628907
798	10.4	0.9	0.0	chr17	48954520	48954634	(34302807)	C	ERVL47-int	LTR/ERVL	(2625)	2621	2506	1628907
1889	16.4	4.0	0.3	chr17	49253661	49253947	(34003494)	+	AluJo	SINE/Alu	1	298	(14)	1629538
2351	11.8	0.7	1.0	chr17	51060223	51060527	(32196914)	+	AluSx1	SINE/Alu	1	304	(8)	1633009
1774	17.3	7.7	8.7	chr17	51060528	51060812	(32196629)	+	MLT1B	LTR/ERVL-MaLR	111	389	(1)	1633008
654	11.3	0.0	17.6	chr17	60602426	60602584	(22654857)	C	FLAM_C	SINE/Alu	(12)	131	1	1649631
16	0.0	0.0	0.0	chr17	71163065	71163082	(12094359)	+	(T)n	Simple_repeat	1	18	(0)	1668366
26	6.3	0.0	0.0	chr17	71163513	71163545	(12093896)	+	(A)n	Simple_repeat	1	33	(0)	1668367
345	34.5	7.0	3.4	chr17	73191681	73191887	(10065554)	+	MIRc	SINE/MIR	20	234	(34)	1671829
306	27.4	1.9	11.7	chr17	73191908	73192027	(10065414)	+	MIRb	SINE/MIR	110	217	(51)	1671830
16	20.9	0.0	0.0	chr17	73192178	73192210	(10065231)	+	A-rich	Low_complexity	1	33	(0)	1671831
2022	14.9	0.6	1.9	chr17	76556759	76557074	(6700367)	+	AluJr	SINE/Alu	1	312	(0)	1678273
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1221	27.2	11.8	3.4	chr17	82366895	82367746	(889695)	C	L1MEg	LINE/L1	(4367)	2670	1738	1687532
1685	7.4	2.8	0.0	chr17	82367747	82367988	(889453)	C	LTR71B	LTR/ERV1	(0)	610	362	1687533
1879	7.3	0.0	13.2	chr17	82518746	82519072	(738369)	C	AluSq	SINE/Alu	(29)	284	1	1687800
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
16	5.3	0.0	0.0	chr18	3594007	3594026	(76779259)	+	(A)n	Simple_repeat	1	20	(0)	1694718
21	12.6	2.2	2.2	chr18	3594322	3594366	(76778919)	+	(CTCC)n	Simple_repeat	1	46	(0)	1694719
15568	17.3	3.7	2.5	chr18	5481200	5487494	(74885791)	+	L1MA4	LINE/L1	1249	7581	(9)	1697285
691	17.3	3.8	0.0	chr18	22342564	22342690	(58030595)	C	FLAM_C	SINE/Alu	(10)	133	2	1714406
82	1.2	2.3	1.1	chr18	23487516	23487603	(56885682)	+	(AAAG)n	Simple_repeat	1	90	(0)	1716301
21	28.8	3.6	0.0	chr18	23487866	23487949	(56885336)	+	A-rich	Low_complexity	1	87	(0)	1716302
248	28.4	17.9	3.2	chr18	23488177	23488365	(56884920)	C	L1MEg	LINE/L1	(5629)	455	233	1716303
554	23.6	4.3	7.7	chr18	23488374	23488460	(56884825)	C	L1MEg	LINE/L1	(5826)	258	180	1716303
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
2346	8.5	0.0	1.0	chr18	24359959	24360265	(56013020)	C	AluSq2	SINE/Alu	(4)	309	6	1717799
234	18.3	11.8	1.6	chr18	26089104	26089164	(54284121)	C	Plat_L3	LINE/CR1	(234)	3352	3285	1720302
536	29.9	2.6	5.6	chr18	32815993	32816226	(47557059)	+	L1MEg	LINE/L1	82	308	(5776)	1729936
1003	26.7	11.0	4.8	chr18	32816273	32816782	(47556503)	+	L1ME3A	LINE/L1	1489	1970	(5363)	1729937
211	29.0	17.5	3.5	chr18	32930449	32930510	(47442775)	+	MIRb	SINE/MIR	188	262	(0)	1730090
269	10.5	0.0	0.0	chr18	32930887	32930924	(47442361)	C	MER135	DNA	(116)	112	75	1730092
2175	12.4	3.2	3.0	chr18	39806529	39806901	(40566384)	C	THE1C	LTR/ERVL-MaLR	(1)	374	1	1739194
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
11	16.7	5.9	0.0	chr18	62877245	62877278	(17496007)	+	(AGTTTTT)n	Simple_repeat	1	36	(0)	1774210
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
1459	8.1	0.0	0.0	chr19	549987	550172	(58067444)	C	AluSx3	SINE/Alu	(125)	186	1	1797122
352	23.1	4.4	0.9	chr19	550342	550450	(58067166)	C	L1MB7	LINE/L1	(0)	6184	6072	1797123
34	10.8	0.0	0.0	chr19	972782	972831	(57644785)	+	(A)n	Simple_repeat	1	50	(0)	1798007
2434	6.6	0.0	1.6	chr19	973105	973407	(57644209)	C	AluSq2	SINE/Alu	(9)	304	7	1798008
11	17.5	1.9	9.1	chr19	1208019	1208072	(57409544)	+	(CTGCC)n	Simple_repeat	1	55	(0)	1798411
2538	4.7	0.0	0.3	chr19	1208307	1208607	(57409009)	C	AluY	SINE/Alu	(11)	300	1	1798412
2032	12.5	0.3	3.0	chr19	4869773	4870077	(53747539)	C	AluSx	SINE/Alu	(13)	299	3	1806724
1028	27.9	12.4	0.9	chr19	4870078	4870316	(53747300)	C	L2a	LINE/L2	(240)	3186	2935	1806723
194	18.4	9.3	0.0	chr19	4870318	4870366	(53747250)	C	MIR1_Amn	SINE/MIR	(105)	125	72	1806725
1388	16.8	9.0	4.5	chr19	5773524	5773809	(52843807)	C	AluJo	SINE/Alu	(12)	300	1	1808819
2304	8.7	0.0	1.0	chr19	5773954	5774265	(52843351)	C	AluSg	SINE/Alu	(1)	309	1	1808820
213	33.7	5.8	0.0	chr19	6199930	6200027	(52417589)	+	MIR1_Amn	SINE/MIR	42	145	(85)	1809669
19	8.1	0.0	0.0	chr19	6200031	6200056	(52417560)	+	(TA)n	Simple_repeat	1	26	(0)	1809670
2231	8.3	2.0	1.3	chr19	6200059	6200360	(52417256)	+	AluSz	SINE/Alu	1	304	(8)	1809671
1133	20.2	6.4	0.8	chr19	8268675	8268923	(50348693)	+	L1M1	LINE/L1	118	381	(7184)	1814864
679	7.2	0.0	4.0	chr19	8268934	8269034	(50348582)	+	LTR13	LTR/ERVK	1	97	(910)	1814866
3791	12.0	2.9	3.3	chr19	8269029	8269730	(50347886)	+	LTR13	LTR/ERVK	256	1007	(0)	1814866
2320	7.5	0.0	0.0	chr19	11125841	11126120	(47491496)	+	AluSq2	SINE/Alu	1	280	(33)	1821510
16	5.3	0.0	0.0	chr19	11126378	11126397	(47491219)	+	(T)n	Simple_repeat	1	20	(0)	1821511
14	0.0	0.0	0.0	chr19	11126562	11126579	(47491037)	+	(CATT)n	Simple_repeat	1	18	(0)	1821512
774	16.5	0.0	3.1	chr19	11126580	11126706	(47490910)	C	AluJr	SINE/Alu	(188)	124	2	1821513
2454	6.7	2.6	0.0	chr19	15414057	15414356	(43203260)	C	AluSp	SINE/Alu	(5)	308	1	1831760
16	13.2	0.0	0.0	chr19	30662550	30662574	(27955042)	+	(T)n	Simple_repeat	1	25	(0)	1852159
31	10.7	0.0	0.0	chr19	35900798	35900849	(22716767)	+	(T)n	Simple_repeat	1	52	(0)	1861405
1996	11.0	3.8	0.0	chr19	35900851	35901131	(22716485)	C	AluSx1	SINE/Alu	(19)	293	2	1861406
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
219	30.5	0.0	4.7	chr19	46874103	46874188	(11743428)	+	L3	LINE/CR1	3765	3846	(253)	1884798
212	23.6	6.8	0.0	chr19	46874426	46874480	(11743136)	+	L3	LINE/CR1	3867	3925	(174)	1884798
2307	10.5	0.3	0.3	chr19	46874495	46874800	(11742816)	C	AluSg4	SINE/Alu	(3)	307	2	1884799
2331	10.5	0.0	1.0	chr19	48838482	48838812	(9778804)	+	AluSx1	SINE/Alu	1	312	(0)	1889743
2007	15.3	0.0	1.3	chr19	50460991	50461304	(8156312)	C	AluJo	SINE/Alu	(2)	310	1	1893577
1422	23.9	6.0	6.2	chr19	50461305	50461430	(8156186)	C	L1MB5	LINE/L1	(354)	5820	5695	1893575
599	29.1	10.7	0.4	chr2	20525960	20526194	(221667335)	+	MIRb	SINE/MIR	7	268	(0)	1940521
16	25.5	0.0	0.0	chr2	20526246	20526280	(221667249)	+	(AT)n	Simple_repeat	1	35	(0)	1940522
2763	26.7	6.0	3.6	chr2	24114227	24115037	(218078492)	C	HERVL40-int	LTR/ERVL	(848)	4682	3851	1945527
1314	24.0	3.0	1.0	chr2	24115043	24115332	(218078197)	C	LTR40c	LTR/ERVL	(169)	296	1	1945528
1531	27.2	4.0	0.9	chr2	24313877	24314307	(217879222)	+	LTR40c	LTR/ERVL	5	449	(16)	1945843
817	29.1	5.2	0.8	chr2	24314346	24314584	(217878945)	+	MIR	SINE/MIR	2	251	(11)	1945844
1665	16.7	0.3	3.5	chr2	27182658	27182968	(215010561)	+	AluJo	SINE/Alu	12	312	(0)	1951328
1033	21.4	7.3	12.1	chr2	27182969	27183205	(215010324)	+	L1MB8	LINE/L1	1031	1260	(5380)	1951327
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
605	25.6	5.2	1.8	chr2	36233842	36234008	(205959521)	C	MER63A	DNA/hAT-Blackjack	(37)	173	1	1965786
200	24.4	0.0	0.0	chr2	36234029	36234069	(205959460)	C	L2a	LINE/L2	(7)	3419	3379	1965787
130	2.8	2.0	1.9	chr2	38325610	38325761	(203867768)	+	(AC)n	Simple_repeat	1	155	(0)	1969006
2566	25.6	5.1	6.9	chr2	38325762	38325974	(203867555)	+	L1MB8	LINE/L1	436	623	(5422)	1969005
572	19.6	13.8	0.0	chr2	38325975	38326086	(203867443)	+	FLAM_A	SINE/Alu	1	130	(12)	1969007
2566	25.6	5.1	6.9	chr2	38326087	38326516	(203867013)	+	L1MB8	LINE/L1	624	1062	(4983)	1969005
14	25.4	3.1	3.0	chr2	38528184	38528247	(203665282)	+	(CCGGCCG)n	Simple_repeat	1	66	(0)	1969410
3348	21.7	7.8	2.2	chr2	39837449	39838429	(202355100)	C	L1PA15-16	LINE/L1	(4729)	2124	1263	1971798
763	29.3	20.8	5.3	chr2	43293508	43294203	(198899326)	C	L3	LINE/CR1	(6)	4093	3262	1977248
4787	15.7	7.2	0.8	chr2	43985205	43986121	(198207408)	C	L1MC2	LINE/L1	(23)	6321	5341	1978349
4525	18.4	10.6	2.9	chr2	68230293	68231379	(173962150)	C	L1MDa	LINE/L1	(4163)	2470	1265	2015268
2034	23.5	7.4	1.8	chr2	68231390	68231952	(173961577)	C	Charlie1a	DNA/hAT-Charlie	(856)	599	3	2015272
278	25.7	11.4	5.1	chr2	84881924	84882079	(157311450)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	1	2039573
518	16.2	0.0	5.7	chr2	84882361	84882465	(157311064)	+	AluSz6	SINE/Alu	214	312	(0)	2039574
390	29.7	12.5	5.8	chr2	85536418	85536678	(156656851)	C	L2c	LINE/L2	(16)	3371	3091	2040994
228	24.3	18.3	0.0	chr2	85536681	85536787	(156656742)	+	L2b	LINE/L2	3244	3374	(1)	2040995
290	33.9	6.5	0.9	chr2	85536899	85537014	(156656515)	C	L2c	LINE/L2	(453)	2966	2844	2040994
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
444	29.2	1.3	9.3	chr2	98269033	98269289	(143924240)	C	L1M3c	LINE/L1	(5007)	1134	899	2054773
482	34.4	5.2	4.7	chr2	98269474	98269836	(143923693)	C	L1M3c	LINE/L1	(5526)	605	241	2054773
19	4.5	0.0	0.0	chr2	111127416	111127438	(131066091)	+	(T)n	Simple_repeat	1	23	(0)	2073132
200	23.8	10.0	0.0	chr2	111127457	111127519	(131066010)	+	L2c	LINE/L2	3240	3309	(78)	2073133
18	23.5	6.0	2.3	chr2	118847038	118847120	(123346409)	+	(CGCTGC)n	Simple_repeat	1	88	(0)	2084332
18	16.9	7.5	0.0	chr2	118847174	118847226	(123346303)	+	(CCGCC)n	Simple_repeat	1	57	(0)	2084333
33	0.0	0.0	0.0	chr2	118847727	118847757	(123345772)	+	(T)n	Simple_repeat	1	31	(0)	2084334
14	21.5	2.2	2.2	chr2	118848013	118848057	(123345472)	+	(TCCCCC)n	Simple_repeat	1	46	(0)	2084335
721	31.8	0.0	3.7	chr2	119823696	119823940	(122369589)	+	MLT1G	LTR/ERVL-MaLR	20	255	(336)	2086018
1407	23.4	2.3	3.8	chr2	119823960	119824358	(122369171)	C	L1MD	LINE/L1	(3152)	2994	2602	2086019
185	21.6	2.6	0.0	chr2	121804346	121804382	(120389147)	+	MamTip2	DNA/hAT-Tip100	186	223	(82)	2089388
2564	18.8	7.0	6.7	chr2	134417166	134417910	(107775619)	C	L1MC4a	LINE/L1	(4)	7878	7132	2107372
19	3.2	2.8	5.4	chr2	142131740	142131781	(100061748)	+	(GTTTT)n	Simple_repeat	1	40	(0)	2118373
17	9.4	5.7	0.0	chr2	147844537	147844571	(94348958)	+	(GAGCCCG)n	Simple_repeat	1	37	(0)	2125792
36	19.1	3.3	1.1	chr2	147844582	147844672	(94348857)	+	(GCC)n	Simple_repeat	1	94	(0)	2125793
13	18.9	0.0	0.0	chr2	147844750	147844779	(94348750)	+	(GCC)n	Simple_repeat	1	30	(0)	2125794
14	9.0	4.9	7.0	chr2	147844870	147844910	(94348619)	+	(TTG)n	Simple_repeat	1	43	(0)	2125795
19	24.0	0.0	0.0	chr2	147844944	147844987	(94348542)	+	(TT)n	Simple_repeat	1	44	(0)	2125796
28	0.0	0.0	0.0	chr2	147845001	147845027	(94348502)	+	(T)n	Simple_repeat	1	27	(0)	2125797
12	30.3	0.0	2.0	chr2	147845236	147845285	(94348244)	+	(GCT)n	Simple_repeat	1	50	(0)	2125798
21	4.2	0.0	0.0	chr2	159712088	159712112	(82481417)	+	(A)n	Simple_repeat	1	25	(0)	2142018
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
1301	23.0	8.4	4.0	chr2	161214699	161215142	(80978387)	C	LTR40c	LTR/ERVL	(0)	465	1	2144122
5216	17.2	6.5	3.2	chr2	161215143	161215205	(80978324)	C	Charlie1a	DNA/hAT-Charlie	(1390)	65	1	2144121
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
1805	11.0	6.2	0.0	chr2	161279685	161279974	(80913555)	+	L1PA10	LINE/L1	5860	6168	(0)	2144206
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
13	20.9	0.0	0.0	chr2	172428127	172428159	(69765370)	+	(CCCCG)n	Simple_repeat	1	33	(0)	2160151
1387	28.4	9.8	4.3	chr2	173448792	173449487	(68744042)	C	LTR41B	LTR/ERVL	(2)	756	19	2161706
11	24.4	2.6	0.0	chr2	174998743	174998781	(67194748)	+	(TTTTTAT)n	Simple_repeat	1	40	(0)	2164148
545	10.3	1.0	6.7	chr2	174998892	174998995	(67194534)	C	L1MB7	LINE/L1	(0)	6184	6087	2164149
7476	14.4	8.0	2.9	chr2	190424634	190425826	(51767703)	C	L1MD1	LINE/L1	(1194)	5343	4064	2184353
6473	20.0	11.4	2.2	chr2	190425825	190426488	(51767041)	C	L1MD1	LINE/L1	(4722)	1911	1185	2184353
21	4.1	0.0	0.0	chr2	190648514	190648538	(51544991)	+	(T)n	Simple_repeat	1	25	(0)	2184671
29	3.2	0.0	0.0	chr2	191678404	191678435	(50515094)	+	(T)n	Simple_repeat	1	32	(0)	2186263
5062	11.6	1.4	2.4	chr2	197686164	197687439	(44506090)	C	L1PB2	LINE/L1	(116)	6035	4783	2194488
24	28.1	0.0	0.0	chr2	197687441	197687504	(44506025)	+	(TT)n	Simple_repeat	1	64	(0)	2194490
27	0.0	3.5	0.0	chr2	197687515	197687543	(44505986)	+	(CTTTTT)n	Simple_repeat	1	30	(0)	2194491
26780	1.9	0.1	0.0	chr2	197687547	197693561	(44499968)	C	L1PA2	LINE/L1	(13)	6142	124	2194492
14304	15.3	1.9	1.3	chr2	201362338	201365061	(40828468)	+	L1PA16	LINE/L1	1	2417	(4436)	2199970
4321	25.9	8.0	6.1	chr2	202659919	202661274	(39532255)	C	L1MEf	LINE/L1	(5153)	1487	32	2202464
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
239	28.8	5.3	1.6	chr2	214809057	214809183	(27384346)	+	MER5A	DNA/hAT-Charlie	58	189	(0)	2220125
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
2442	9.7	0.0	0.0	chr20	3117710	3118018	(61326149)	+	AluSx1	SINE/Alu	1	309	(3)	2268240
861	17.2	7.0	1.8	chr20	3118019	3118181	(61325986)	+	AluSx3	SINE/Alu	133	304	(7)	2268241
2079	14.5	0.3	0.0	chr20	3118191	3118486	(61325681)	+	AluSx1	SINE/Alu	1	297	(15)	2268242
371	11.1	0.0	1.9	chr20	5448374	5448477	(58995690)	C	AluYh7	SINE/Alu	(0)	311	229	2272578
27	3.5	0.0	0.0	chr20	20011093	20011122	(44433045)	+	(TCCT)n	Simple_repeat	1	30	(0)	2295040
31	12.3	1.8	0.0	chr20	20362795	20362849	(44081318)	+	(AGAG)n	Simple_repeat	1	56	(0)	2295535
5631	14.8	3.0	7.2	chr20	29880107	29881265	(34562902)	+	Tigger1	DNA/TcMar-Tigger	1310	2418	(0)	2304624
386	18.8	0.0	0.0	chr20	29881277	29881340	(34562827)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
339	19.1	1.6	0.0	chr20	29881352	29881414	(34562753)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
2610	7.1	0.0	0.0	chr20	35096074	35096370	(29347797)	+	AluSx4	SINE/Alu	1	297	(13)	2314498
1074	15.4	3.0	0.6	chr20	35096602	35096763	(29347404)	C	FRAM	SINE/Alu	(10)	166	1	2314499
535	22.9	0.0	1.8	chr20	35096921	35097031	(29347136)	C	L2a	LINE/L2	(15)	3411	3303	2314500
214	19.0	17.1	0.0	chr20	35097035	35097092	(29347075)	C	MIRb	SINE/MIR	(6)	262	193	2314501
216	24.3	13.3	4.1	chr20	36606446	36606577	(27837590)	C	MIR	SINE/MIR	(0)	262	122	2318001
1817	7.0	1.6	0.4	chr20	40547269	40547511	(23896656)	+	L1PA3	LINE/L1	5907	6152	(3)	2325994
421	24.1	2.0	21.1	chr20	50635682	50635809	(13808358)	C	MIRb	SINE/MIR	(131)	137	33	2347338
769	21.2	0.7	1.4	chr20	51988006	51988151	(12456016)	+	AluJb	SINE/Alu	149	293	(19)	2350462
312	18.0	0.0	0.0	chr20	51988152	51988201	(12455966)	+	MLT1A0	LTR/ERVL-MaLR	316	365	(0)	2350461
2028	12.1	3.2	0.0	chr20	51988251	51988553	(12455614)	C	AluSx	SINE/Alu	(0)	312	2	2350463
2152	12.0	0.0	1.6	chr20	62121112	62121428	(2322739)	C	AluSx1	SINE/Alu	(0)	312	1	2368175
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
2857	11.8	6.1	3.3	chr21	9329835	9329944	(37380039)	C	MER57-int	LTR/ERV1	(395)	7142	7032	2374430
12	28.2	1.9	1.9	chr21	9330622	9330674	(37379309)	+	(GTTTCTG)n	Simple_repeat	1	54	(0)	2374432
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
29	0.0	0.0	0.0	chr21	32919212	32919243	(13790740)	+	(A)n	Simple_repeat	1	32	(0)	2403998
418	23.4	3.5	0.0	chr21	33229608	33229718	(13480265)	C	L2a	LINE/L2	(0)	3426	3312	2404549
29	24.7	4.5	3.6	chr21	33229801	33229933	(13480050)	+	(GCCCGC)n	Simple_repeat	1	139	(0)	2404550
13	24.8	5.7	2.7	chr21	43865646	43865715	(2844268)	+	(GCCGG)n	Simple_repeat	1	74	(0)	2420954
16	0.0	0.0	0.0	chr21	43866121	43866137	(2843846)	+	(T)n	Simple_repeat	1	17	(0)	2420955
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
194	24.2	10.1	1.6	chr22	21837406	21837468	(28981000)	C	L2	LINE/L2	(1111)	2308	2240	2436013
3205	24.0	7.3	5.4	chr22	22995226	22996470	(27821998)	+	L1M4a1	LINE/L1	319	1841	(738)	2437626
2564	6.2	0.3	0.0	chr22	23522280	23522588	(27295880)	+	AluY	SINE/Alu	2	311	(0)	2438433
12	21.6	5.3	3.3	chr22	23522607	23522663	(27295805)	+	(TGTTAC)n	Simple_repeat	1	60	(0)	2438434
18	10.4	2.1	6.2	chr22	23522720	23522766	(27295702)	+	G-rich	Low_complexity	1	48	(0)	2438435
522	29.8	5.9	7.0	chr22	25943281	25943706	(24874762)	+	L2a	LINE/L2	2655	3102	(324)	2443211
44	24.2	3.4	4.3	chr22	31346131	31346309	(19472159)	+	(GGC)n	Simple_repeat	1	185	(0)	2454548
13	28.1	3.6	0.0	chr22	31346606	31346661	(19471807)	+	(CACTCCC)n	Simple_repeat	1	58	(0)	2454549
2104	14.6	10.2	1.1	chr22	35107296	35107738	(15710730)	C	L1MD1	LINE/L1	(4035)	2598	2111	2462273
5790	21.2	11.6	1.5	chr22	35107737	35109145	(15709323)	C	L1MD1	LINE/L1	(5047)	1586	17	2462273
17	7.0	3.3	0.0	chr22	39145272	39145301	(11673167)	+	(CGCCG)n	Simple_repeat	1	31	(0)	2470987
19	10.4	0.0	0.0	chr22	39145719	39145760	(11672708)	+	(GGGGGC)n	Simple_repeat	1	42	(0)	2470988
370	31.5	3.0	0.0	chr22	39146141	39146267	(11672201)	+	MIR	SINE/MIR	127	257	(5)	2470985
2581	7.1	0.0	0.0	chr22	39387798	39388108	(11430360)	+	AluSp	SINE/Alu	1	311	(2)	2471545
2380	8.0	0.7	1.9	chr22	39388109	39388280	(11430188)	+	AluSx1	SINE/Alu	137	307	(5)	2471544
979	15.8	18.1	0.3	chr22	39533082	39533367	(11285101)	+	Charlie1	DNA/hAT-Charlie	2393	2740	(41)	2471834
293	28.9	7.1	4.3	chr22	40899002	40899164	(9919304)	C	MER21-int	LTR/ERVL	(3543)	648	481	2474588
16	4.0	3.9	0.0	chr22	41091076	41091101	(9727367)	+	(AAAT)n	Simple_repeat	1	27	(0)	2475136
13	17.0	3.0	0.0	chr22	41091100	41091132	(9727336)	+	A-rich	Low_complexity	1	34	(0)	2475137
2098	11.9	2.9	0.3	chr22	41667185	41667487	(9150981)	+	AluSx1	SINE/Alu	1	311	(1)	2476466
822	14.7	27.8	2.3	chr22	43862984	43863201	(6955267)	+	AluSg7	SINE/Alu	2	296	(13)	2480893
2197	7.1	0.0	4.8	chr22	43863239	43863568	(6954900)	C	AluY	SINE/Alu	(0)	311	1	2480894
2563	6.4	0.0	0.3	chr22	43924636	43924946	(6893522)	C	AluY	SINE/Alu	(0)	311	2	2481026
383	27.7	13.4	5.9	chr3	9715577	9715829	(188579730)	C	MamRep564	Unknown	(14)	343	69	2507796
12	18.8	2.6	2.6	chr3	16149075	16149112	(182146447)	+	(CAGCC)n	Simple_repeat	1	39	(0)	2520030
33	0.0	0.0	0.0	chr3	17741801	17741831	(180553728)	+	(T)n	Simple_repeat	1	31	(0)	2522302
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
1088	23.1	0.7	5.3	chr3	34929063	34929094	(163366465)	+	L1M2	LINE/L1	5602	5626	(671)	2548041
5008	21.4	10.1	3.1	chr3	38145696	38147555	(160148004)	+	L1MDa	LINE/L1	15	2166	(4467)	2552576
221	33.1	3.2	5.7	chr3	49094659	49094850	(149200709)	+	L2b	LINE/L2	3015	3201	(174)	2570662
241	29.4	4.7	7.1	chr3	53242927	53243080	(145052479)	+	L1ME4c	LINE/L1	563	712	(118)	2577267
280	14.6	2.0	0.0	chr3	63875395	63875442	(134420117)	C	MLT1A0	LTR/ERVL-MaLR	(316)	49	1	2594827
1938	14.2	3.2	2.6	chr3	65962553	65962862	(132332697)	+	AluSz	SINE/Alu	1	312	(0)	2598367
14	7.7	7.1	0.0	chr3	65962863	65962890	(132332669)	+	(GAA)n	Simple_repeat	1	30	(0)	2598368
1761	12.5	7.4	1.8	chr3	65963049	65963328	(132332231)	+	AluSx	SINE/Alu	1	297	(15)	2598369
1892	8.9	4.1	0.4	chr3	72875405	72875662	(125419897)	+	AluSc	SINE/Alu	40	307	(2)	2610110
1803	18.4	0.0	1.9	chr3	72875698	72876012	(125419547)	+	AluJb	SINE/Alu	1	309	(3)	2610111
932	24.9	8.3	1.9	chr3	73404645	73404959	(124890600)	+	MER113	DNA/hAT-Charlie	177	513	(8)	2611141
2833	12.4	6.1	2.9	chr3	75780299	75780412	(122515147)	+	MER57-int	LTR/ERV1	7032	7145	(392)	2614695
2313	8.7	1.4	0.0	chr3	75780413	75780699	(122514860)	C	AluY	SINE/Alu	(20)	291	1	2614699
763	18.4	9.4	0.6	chr3	94082248	94082411	(104213148)	+	MER5A	DNA/hAT-Charlie	9	188	(1)	2633794
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
5414	13.4	1.1	2.7	chr3	100435539	100436452	(97859107)	C	MER49	LTR/ERV1	(24)	899	1	2641730
12	14.7	3.3	0.0	chr3	119322765	119322794	(78972765)	+	(GCTCCT)n	Simple_repeat	1	31	(0)	2667375
22	24.2	0.0	0.0	chr3	119323450	119323513	(78972046)	+	(T)n	Simple_repeat	1	64	(0)	2667376
7029	16.5	4.6	3.5	chr3	127828723	127830134	(70465425)	C	L1MD2	LINE/L1	(4207)	2426	993	2680738
34	0.0	0.0	0.0	chr3	136404864	136404892	(61890667)	+	(TG)n	Simple_repeat	1	29	(0)	2694318
2436	23.8	3.1	7.0	chr3	136405178	136405231	(61890328)	+	L1ME1	LINE/L1	5346	5394	(785)	2694319
1967	15.3	0.4	0.4	chr3	136405232	136405541	(61890018)	C	AluSz	SINE/Alu	(0)	312	1	2694320
2499	8.0	0.0	0.6	chr3	136733826	136734138	(61561421)	+	AluY	SINE/Alu	1	311	(0)	2694957
1776	25.1	9.7	6.8	chr3	136734139	136734633	(61560926)	+	LTR83	LTR/ERVL	241	759	(21)	2694956
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
15	20.2	4.8	4.6	chr3	148991651	148991712	(49303847)	+	(CCG)n	Simple_repeat	1	65	(0)	2712870
674	14.3	7.3	8.1	chr3	149080883	149081097	(49214462)	+	Tigger3c	DNA/TcMar-Tigger	295	437	(165)	2713019
287	20.3	8.0	0.0	chr3	149081101	149081169	(49214390)	+	Tigger3d	DNA/TcMar-Tigger	247	321	(0)	2713020
225	31.2	13.5	2.4	chr3	150407504	150407667	(47887892)	+	X7C_LINE	LINE/CR1	32	216	(20)	2715185
22	7.7	2.2	4.3	chr3	156674852	156674896	(41620663)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	2724395
5687	26.8	13.9	5.9	chr3	161230437	161232182	(37063377)	C	L2a	LINE/L2	(1609)	1810	2	2731031
310	36.9	4.4	9.8	chr3	161232348	161232828	(37062731)	+	L2	LINE/L2	2313	2766	(653)	2731033
34	0.0	0.0	0.0	chr3	168120012	168120048	(30175511)	+	(A)n	Simple_repeat	1	37	(0)	2739623
2489	4.3	0.4	0.4	chr3	168120107	168120415	(30175144)	C	AluY	SINE/Alu	(0)	311	1	2739624
242	20.3	5.3	2.5	chr3	170815354	170815468	(27480091)	C	L1ME4c	LINE/L1	(122)	6002	5960	2743634
2181	13.0	0.3	8.9	chr3	170815486	170815856	(27479703)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2743635
270	25.0	5.0	1.3	chr3	191377146	191377222	(6918337)	+	MER102c	DNA/hAT-Charlie	252	331	(0)	2776437
1027	9.8	0.0	0.0	chr3	195394539	195394671	(2900888)	+	AluSz6	SINE/Alu	6	138	(174)	2782834
1030	16.5	0.9	12.3	chr3	195394675	195394917	(2900642)	+	AluJr4	SINE/Alu	68	282	(30)	2782835
16	0.0	0.0	0.0	chr3	195394918	195394935	(2900624)	+	(T)n	Simple_repeat	1	18	(0)	2782836
12	26.4	0.0	5.5	chr3	195395242	195395296	(2900263)	+	A-rich	Low_complexity	1	55	(0)	2782837
16	18.7	6.1	0.0	chr3	195543395	195543443	(2752116)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2783235
204	28.2	5.3	0.0	chr3	195543545	195543615	(2751944)	C	MIRb	SINE/MIR	(89)	179	105	2783236
425	18.6	11.9	0.7	chr3	195543917	195544057	(2751502)	+	MLT1C	LTR/ERVL-MaLR	303	461	(6)	2783237
25	10.7	0.0	0.0	chr4	20251997	20252036	(169962519)	+	(GGC)n	Simple_repeat	1	40	(0)	2820693
15	14.2	10.6	0.0	chr4	26860767	26860813	(163353742)	+	(GCG)n	Simple_repeat	1	52	(0)	2831734
16	0.0	0.0	0.0	chr4	26860925	26860942	(163353613)	+	(T)n	Simple_repeat	1	18	(0)	2831735
26	23.2	0.0	4.8	chr4	26861040	26861122	(163353433)	+	(GGC)n	Simple_repeat	1	83	(0)	2831736
13	17.3	3.9	5.7	chr4	26861187	26861237	(163353318)	+	(GCTGC)n	Simple_repeat	1	53	(0)	2831737
20	0.0	0.0	0.0	chr4	26861696	26861717	(163352838)	+	(T)n	Simple_repeat	1	22	(0)	2831738
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
6284	16.2	2.4	6.3	chr4	55531331	55531424	(134683131)	+	L1M3	LINE/L1	3477	3561	(2579)	2871057
2447	9.8	0.0	0.0	chr4	55531425	55531731	(134682824)	+	AluSc	SINE/Alu	1	307	(2)	2871058
6284	16.2	2.4	6.3	chr4	55531732	55532594	(134681961)	+	L1M3	LINE/L1	3562	4396	(1744)	2871057
642	1.2	0.0	3.5	chr4	72602944	72603029	(117611526)	+	L1PA4	LINE/L1	6073	6155	(0)	2893721
1613	16.6	10.7	1.3	chr4	72603072	72603445	(117611110)	C	MSTB1	LTR/ERVL-MaLR	(6)	451	1	2893722
2027	16.1	1.0	0.7	chr4	82017997	82018300	(108196255)	C	AluJb	SINE/Alu	(7)	305	1	2906978
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
16	23.3	2.2	0.0	chr4	89307845	89307889	(100906666)	+	(GCC)n	Simple_repeat	1	46	(0)	2918454
23	0.0	0.0	0.0	chr4	94757884	94757908	(95456647)	+	(A)n	Simple_repeat	1	25	(0)	2925516
258	25.0	0.0	5.9	chr4	95556634	95556735	(94657820)	+	MLT1H	LTR/ERVL-MaLR	438	533	(16)	2926567
240	34.6	6.9	7.5	chr4	95556798	95557075	(94657480)	C	L2c	LINE/L2	(60)	3327	3052	2926568
2548	3.9	1.3	3.5	chr4	102431063	102431374	(87783181)	+	AluY	SINE/Alu	1	305	(6)	2935679
1288	24.9	9.0	1.5	chr4	103075493	103075884	(87138671)	+	MLT1J2	LTR/ERVL-MaLR	6	429	(19)	2936592
760	20.8	8.2	2.2	chr4	118307556	118307737	(71906818)	+	Tigger17c	DNA/TcMar-Tigger	62	255	(933)	2956693
1227	17.8	3.5	3.9	chr4	118307738	118307994	(71906561)	C	Tigger17c	DNA/TcMar-Tigger	(773)	415	160	2956694
431	19.0	8.1	0.0	chr4	118307993	118308071	(71906484)	+	Tigger17a	DNA/TcMar-Tigger	567	652	(2)	2956695
3039	16.7	4.5	0.5	chr4	119730565	119731135	(70483420)	C	LTR49	LTR/ERV1	(0)	595	1	2958903
455	29.9	11.5	1.7	chr4	122921914	122922148	(67292407)	C	MIRb	SINE/MIR	(1)	267	7	2963233
16	0.0	4.3	0.0	chr4	123505553	123505575	(66708980)	+	(TGA)n	Simple_repeat	1	24	(0)	2964102
20	0.0	0.0	0.0	chr4	123505599	123505620	(66708935)	+	(A)n	Simple_repeat	1	22	(0)	2964103
17	25.9	0.0	1.9	chr4	123505639	123505690	(66708865)	+	(CGC)n	Simple_repeat	1	52	(0)	2964104
540	6.3	3.6	2.5	chr4	139466880	139466960	(50747595)	C	L1M4	LINE/L1	(900)	5246	5165	2984681
1912	17.0	0.0	0.0	chr4	139466962	139467268	(50747287)	C	AluSx1	SINE/Alu	(0)	312	1	2984682
31	0.0	0.0	0.0	chr4	139467309	139467337	(50747218)	+	(T)n	Simple_repeat	1	29	(0)	2984683
18	0.0	0.0	0.0	chr4	139467374	139467393	(50747162)	+	(T)n	Simple_repeat	1	20	(0)	2984683
1056	23.5	7.7	5.4	chr4	144610389	144610852	(45603703)	C	LTR40a	LTR/ERVL	(0)	462	14	2991830
379	21.5	4.1	0.0	chr4	148390246	148390338	(41824217)	+	L1ME3Cz	LINE/L1	869	965	(32)	2997055
19	0.0	0.0	0.0	chr4	150867113	150867133	(39347422)	+	(A)n	Simple_repeat	1	21	(0)	3000376
287	7.0	0.0	6.5	chr4	150867344	150867389	(39347166)	+	MADE1	DNA/TcMar-Mariner	1	43	(37)	3000377
284	34.9	5.2	0.0	chr4	169311575	169311703	(20902852)	C	L2b	LINE/L2	(11)	3364	3229	3026148
2235	8.7	5.3	0.3	chr4	176237940	176238227	(13976328)	+	AluSx1	SINE/Alu	1	303	(9)	3035274
15	13.9	0.0	0.0	chr4	182450390	182450413	(7764142)	+	(T)n	Simple_repeat	1	24	(0)	3043421
2402	18.7	15.5	2.6	chr4	184649996	184650610	(5563945)	C	LTR62	LTR/ERVL	(0)	709	1	3046947
206	26.5	13.5	0.0	chr4	184650905	184650987	(5563568)	C	MIRb	SINE/MIR	(63)	205	110	3046948
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
279	26.7	11.5	1.5	chr5	14328664	14328796	(167209463)	C	MIRb	SINE/MIR	(36)	232	85	3072070
3975	13.1	2.3	2.5	chr5	38660105	38660746	(142877513)	+	LTR9D	LTR/ERV1	5	645	(0)	3106453
21	0.0	0.0	0.0	chr5	43122247	43122269	(138415990)	+	(T)n	Simple_repeat	1	23	(0)	3112577
14	17.9	5.1	0.0	chr5	55307834	55307872	(126230387)	+	A-rich	Low_complexity	1	41	(0)	3123044
22	4.0	0.0	0.0	chr5	59276123	59276148	(122262111)	+	(A)n	Simple_repeat	1	26	(0)	3129312
404	18.9	13.2	1.5	chr5	65036021	65036154	(116502105)	C	L1ME4a	LINE/L1	(0)	6124	5973	3137272
303	30.8	10.6	3.0	chr5	65036193	65036393	(116501866)	C	L1ME4a	LINE/L1	(189)	5935	5718	3137272
27	6.0	0.0	0.0	chr5	81750239	81750273	(99787986)	+	(GCCCCA)n	Simple_repeat	1	35	(0)	3163564
17	28.8	1.6	1.6	chr5	87267811	87267873	(94270386)	+	(CTCC)n	Simple_repeat	1	64	(0)	3170894
13	24.4	2.0	2.0	chr5	102670015	102670064	(78868195)	+	(ATTTTTT)n	Simple_repeat	1	51	(0)	3190420
23	3.0	0.0	5.3	chr5	102670500	102670552	(78867707)	+	(AAAAC)n	Simple_repeat	1	50	(0)	3190421
1381	26.3	12.9	3.3	chr5	103347324	103347783	(78190476)	C	LTR16E1	LTR/ERVL	(1)	537	27	3191314
781	23.2	1.3	0.0	chr5	103347831	103347981	(78190278)	+	FordPrefect_a	DNA/hAT-Tip100	356	508	(0)	3191315
789	29.1	9.0	4.9	chr5	103348360	103348764	(78189495)	+	MLT1H	LTR/ERVL-MaLR	124	546	(3)	3191316
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
1786	27.7	6.4	4.1	chr5	109468126	109468878	(72069381)	+	L1ME4b	LINE/L1	107	890	(2)	3199027
1084	20.3	6.4	1.4	chr5	122321104	122321383	(59216876)	C	MER33	DNA/hAT-Charlie	(22)	302	8	3215747
4746	24.2	5.5	2.5	chr5	122954628	122956169	(58582090)	C	L1MDa	LINE/L1	(4720)	1913	180	3216733
65	15.0	3.8	0.7	chr5	124865795	124865926	(56672333)	+	GA-rich	Low_complexity	1	137	(0)	3219292
2264	20.1	5.3	3.7	chr5	127141488	127141902	(54396357)	+	L1MDa	LINE/L1	1174	1597	(5036)	3222460
759	15.9	6.1	0.4	chr5	127141881	127142151	(54396108)	+	L1MDa	LINE/L1	5566	5847	(706)	3222460
203	29.2	4.3	11.9	chr5	139651919	139652019	(41886240)	C	L2c	LINE/L2	(0)	3387	3295	3241248
22	0.0	0.0	0.0	chr5	139652148	139652171	(41886088)	+	(GC)n	Simple_repeat	1	24	(0)	3241249
36	2.5	2.3	2.3	chr5	139652172	139652214	(41886045)	+	(GT)n	Simple_repeat	1	44	(0)	3241250
636	14.9	1.6	1.6	chr5	140726264	140726386	(40811873)	+	L1MC3	LINE/L1	6737	6859	(926)	3243152
16	0.0	0.0	0.0	chr5	142325276	142325292	(39212967)	+	(T)n	Simple_repeat	1	17	(0)	3245723
18	17.1	1.5	0.0	chr5	143577231	143577270	(37960989)	+	A-rich	Low_complexity	1	40	(0)	3247910
11	21.2	2.5	2.4	chr5	151224039	151224078	(30314181)	+	(CCCGCTG)n	Simple_repeat	1	41	(0)	3261431
228	30.8	3.7	0.0	chr5	154941330	154941407	(26596852)	C	L2b	LINE/L2	(23)	3352	3272	3268342
487	28.1	5.0	0.0	chr5	154941627	154941779	(26596480)	C	MIRb	SINE/MIR	(28)	240	80	3268343
15	15.8	7.1	0.0	chr5	159099754	159099795	(22438464)	+	(TGGT)n	Simple_repeat	1	45	(0)	3275547
27	6.0	0.0	0.0	chr5	159099803	159099837	(22438422)	+	(T)n	Simple_repeat	1	35	(0)	3275548
34	2.6	0.0	0.0	chr5	159099917	159099955	(22438304)	+	(A)n	Simple_repeat	1	39	(0)	3275549
32	18.1	3.1	0.0	chr5	159100169	159100233	(22438026)	+	GA-rich	Low_complexity	1	67	(0)	3275550
26	24.4	1.6	0.0	chr5	169980579	169980642	(11557617)	+	(AC)n	Simple_repeat	1	65	(0)	3292738
15	5.6	0.0	0.0	chr5	173057809	173057827	(8480432)	+	(T)n	Simple_repeat	1	19	(0)	3298844
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
3642	25.4	4.0	4.7	chr5	179390212	179393156	(2145103)	+	L1ME2	LINE/L1	805	3884	(2680)	3310752
588	27.6	18.5	2.7	chr5	179393159	179393456	(2144803)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	198	3310755
2130	4.3	0.7	2.5	chr5	181262211	181262489	(275770)	C	AluY	SINE/Alu	(7)	304	31	3313945
14	16.5	2.9	0.0	chr6	422467	422500	(170383479)	+	(TTAA)n	Simple_repeat	1	35	(0)	3314793
30	0.0	0.0	0.0	chr6	423069	423096	(170382883)	+	(T)n	Simple_repeat	1	28	(0)	3314794
18	12.0	0.0	0.0	chr6	1667688	1667714	(169138265)	+	(T)n	Simple_repeat	1	27	(0)	3316443
196	35.3	5.6	5.0	chr6	1832704	1832882	(168973097)	+	L3	LINE/CR1	2318	2497	(1602)	3316637
21	0.0	0.0	0.0	chr6	1833127	1833149	(168972830)	+	(T)n	Simple_repeat	1	23	(0)	3316638
10571	18.9	4.4	2.5	chr6	2572794	2576084	(168229895)	C	L1MC3	LINE/L1	(2096)	4441	1042	3317631
1045	18.6	0.0	1.1	chr6	2836710	2836886	(167969093)	+	AluJb	SINE/Alu	138	312	(0)	3317988
1001	17.5	0.0	1.2	chr6	3126587	3126752	(167679227)	C	AluSc	SINE/Alu	(11)	298	135	3318445
20	0.0	0.0	0.0	chr6	7543394	7543415	(163262564)	+	(T)n	Simple_repeat	1	22	(0)	3325358
16	16.9	0.0	0.0	chr6	16146868	16146894	(154659085)	+	A-rich	Low_complexity	1	27	(0)	3339057
15	27.2	1.7	1.7	chr6	16558828	16558886	(154247093)	+	(AAGACAA)n	Simple_repeat	1	60	(0)	3339690
2360	26.4	5.4	2.6	chr6	16558929	16559721	(154246258)	+	L1ME4b	LINE/L1	47	849	(43)	3339691
15	5.5	0.0	0.0	chr6	17277726	17277744	(153528235)	+	(A)n	Simple_repeat	1	19	(0)	3340857
363	24.5	13.1	4.5	chr6	24614514	24614694	(146191285)	C	MIRb	SINE/MIR	(44)	218	2	3352240
350	28.8	6.4	0.8	chr6	24614893	24615025	(146190954)	+	L2a	LINE/L2	3286	3426	(0)	3352241
667	1.3	0.0	0.0	chr6	26331441	26331515	(144474464)	C	tRNA-Trp-TGG	tRNA	(0)	75	1	3355039
308	25.6	12.4	4.3	chr6	30648039	30648201	(140157778)	C	MIRb	SINE/MIR	(0)	268	91	3361954
1407	9.1	5.0	5.9	chr6	33318225	33318444	(137487535)	+	AluJb	SINE/Alu	88	305	(7)	3366189
382	26.4	0.6	13.9	chr6	33364285	33364407	(137441572)	+	L1M5	LINE/L1	3646	3766	(2380)	3366293
17	18.4	0.0	0.0	chr6	33364408	33364438	(137441541)	+	(TG)n	Simple_repeat	1	31	(0)	3366295
366	12.9	0.0	6.7	chr6	33364482	33364556	(137441423)	C	L1MB5	LINE/L1	(286)	5888	5819	3366296
1011	18.3	1.1	0.6	chr6	33364557	33364737	(137441242)	C	AluJb	SINE/Alu	(11)	301	120	3366297
896	25.4	8.3	17.2	chr6	35694447	35694683	(135111296)	C	L1MEg	LINE/L1	(5449)	635	410	3370927
12	13.9	6.2	0.0	chr6	35694691	35694722	(135111257)	+	(TTTTG)n	Simple_repeat	1	34	(0)	3370932
343	18.5	0.0	1.4	chr6	35694784	35694859	(135111120)	C	MLT1H2	LTR/ERVL-MaLR	(4)	545	431	3370933
5455	19.6	4.9	1.8	chr6	37418381	37419583	(133386396)	C	L1ME1	LINE/L1	(6190)	1327	86	3374632
2472	6.8	1.0	0.0	chr6	42747782	42748103	(128057876)	C	AluSp	SINE/Alu	(0)	313	1	3383929
265	24.2	17.8	12.0	chr6	43485536	43485751	(127320228)	+	L2c	LINE/L2	3145	3375	(12)	3385459
187	33.3	2.8	0.0	chr6	43485801	43485869	(127320110)	+	AmnSINE1	SINE/5S-Deu-L2	503	573	(2)	3385460
442	29.9	2.0	0.7	chr6	47235920	47236067	(123569912)	C	L2	LINE/L2	(619)	2800	2651	3391440
222	16.5	6.9	9.5	chr6	47236089	47236181	(123569798)	C	MIRb	SINE/MIR	(153)	115	20	3391441
7031	17.1	5.2	7.0	chr6	63651662	63654283	(107151696)	C	L1MA5	LINE/L1	(259)	6041	3474	3410937
732	6.2	45.9	3.6	chr6	99394273	99394485	(71411494)	C	AluSx	SINE/Alu	(9)	303	1	3457559
1081	18.4	10.1	6.0	chr6	110879081	110879363	(59926616)	+	AluJb	SINE/Alu	1	296	(16)	3474529
302	32.6	5.4	3.3	chr6	111478161	111478341	(59327638)	+	L2c	LINE/L2	3135	3319	(68)	3475659
288	25.5	8.4	5.8	chr6	111604944	111605047	(59200932)	C	MIRc	SINE/MIR	(119)	149	43	3475906
633	27.1	5.5	1.8	chr6	112042908	112043136	(58762843)	+	Tigger13a	DNA/TcMar-Tigger	430	667	(104)	3476566
7810	2.6	0.0	0.0	chr6	126043056	126044503	(44761476)	C	L1PA3	LINE/L1	(3)	6152	4705	3495183
1591	23.4	6.2	9.4	chr6	126044515	126044903	(44761076)	+	LTR40a	LTR/ERVL	3	369	(150)	3495184
2365	10.0	0.0	0.7	chr6	126044904	126045202	(44760777)	+	AluSx	SINE/Alu	1	297	(15)	3495185
231	33.9	11.0	3.2	chr6	131966385	131966509	(38839470)	C	L2b	LINE/L2	(13)	3362	3227	3503179
229	28.6	0.0	0.0	chr6	132484123	132484178	(38321801)	+	Tigger19b	DNA/TcMar-Tigger	468	523	(27)	3503885
1551	28.7	5.8	10.7	chr6	140873822	140873966	(29932013)	+	L1MC5	LINE/L1	8505	8602	(702)	3516582
484	12.5	0.0	1.2	chr6	140873967	140874047	(29931932)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	3516589
1551	28.7	5.8	10.7	chr6	140874048	140874384	(29931595)	+	L1MC5	LINE/L1	8603	8912	(392)	3516582
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
19	8.3	0.0	0.0	chr6	154510937	154510962	(16295017)	+	(A)n	Simple_repeat	1	26	(0)	3536517
2382	7.5	0.0	0.0	chr6	154511057	154511348	(16294631)	C	AluSx1	SINE/Alu	(20)	292	1	3536518
363	24.4	3.2	2.5	chr6	163533295	163533416	(7272563)	C	MER119	DNA/hAT-Charlie	(2)	581	459	3549594
1319	21.9	2.8	0.4	chr6	163533432	163533711	(7272268)	C	MER119	DNA/hAT-Charlie	(204)	379	93	3549594
1813	27.6	3.1	4.9	chr6	166031586	166032426	(4773553)	+	L1MEc	LINE/L1	2425	3254	(3065)	3552699
3175	23.1	8.4	9.0	chr6	166032433	166033556	(4772423)	+	L1M4a2	LINE/L1	1	1117	(1539)	3552701
18	19.9	2.2	0.0	chr7	6730018	6730063	(152615910)	+	(GGCGGA)n	Simple_repeat	1	47	(0)	3570020
2428	10.1	0.0	0.0	chr7	25069780	25070086	(134275887)	+	AluSx1	SINE/Alu	1	307	(5)	3594841
17	15.6	0.0	0.0	chr7	25070212	25070240	(134275733)	+	(T)n	Simple_repeat	1	29	(0)	3594842
55	0.0	0.0	0.0	chr7	26377019	26377065	(132968908)	+	(TG)n	Simple_repeat	1	47	(0)	3596951
2539	6.2	0.0	0.7	chr7	40531669	40531973	(118814000)	C	AluY	SINE/Alu	(8)	303	1	3618600
52	0.0	2.1	0.0	chr7	42888046	42888093	(116457880)	+	(GT)n	Simple_repeat	1	49	(0)	3621808
237	20.6	6.4	5.2	chr7	42888108	42888184	(116457789)	+	MER54B	LTR/ERVL	367	444	(349)	3621806
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
194	29.4	15.4	11.4	chr7	65448670	65448880	(93897093)	+	L2a	LINE/L2	3143	3414	(12)	3647851
5794	23.5	5.3	4.5	chr7	77399716	77401883	(81944090)	+	L1MDa	LINE/L1	31	2309	(4324)	3673701
20	23.4	6.0	0.0	chr7	82384592	82384658	(76961315)	+	GA-rich	Low_complexity	1	71	(0)	3680812
19	4.5	0.0	0.0	chr7	84194791	84194813	(75151160)	+	(A)n	Simple_repeat	1	23	(0)	3683241
52	2.1	0.0	0.0	chr7	84195005	84195053	(75150920)	+	(AG)n	Simple_repeat	1	49	(0)	3683242
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
1953	3.4	0.0	0.0	chr7	90152897	90153135	(69192838)	+	SVA_D	Retroposon/SVA	1137	1375	(11)	3690679
34	4.9	0.0	0.0	chr7	90153147	90153188	(69192785)	+	(A)n	Simple_repeat	1	42	(0)	3690680
3441	19.9	7.8	1.9	chr7	92119125	92120019	(67225954)	+	L1MB7	LINE/L1	465	1416	(6101)	3693387
187	26.5	5.7	4.6	chr7	92634783	92634869	(66711104)	+	OldhAT1	DNA/hAT-Ac	2230	2317	(531)	3694203
26	19.1	0.0	0.0	chr7	92695272	92695319	(66650654)	+	A-rich	Low_complexity	1	48	(0)	3694299
18	29.1	0.0	0.0	chr7	113186452	113186506	(46159467)	+	(TTT)n	Simple_repeat	1	55	(0)	3726839
339	9.8	0.0	0.0	chr7	113186507	113186547	(46159426)	C	AluYj4	SINE/Alu	(144)	167	127	3726840
12	10.0	0.0	0.0	chr7	113186567	113186588	(46159385)	+	(TTCT)n	Simple_repeat	1	22	(0)	3726841
969	5.9	0.0	1.7	chr7	113186591	113186709	(46159264)	C	AluY	SINE/Alu	(145)	166	50	3726842
322	26.1	4.3	6.0	chr7	123652550	123652716	(35693257)	+	MARNA	DNA/TcMar-Mariner	241	404	(182)	3740758
31	16.8	0.0	0.0	chr7	123652717	123652770	(35693203)	+	A-rich	Low_complexity	1	54	(0)	3740759
412	31.2	13.5	2.4	chr7	128738496	128738869	(30607104)	C	L2c	LINE/L2	(48)	3339	2918	3747900
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
2392	9.6	0.0	0.0	chr7	128883135	128883437	(30462536)	C	AluSc	SINE/Alu	(6)	303	1	3748095
15	4.7	0.0	0.0	chr7	129635371	129635392	(29710581)	+	(TTTG)n	Simple_repeat	1	22	(0)	3749573
458	31.7	15.0	1.1	chr7	129635707	129635993	(29709980)	C	L3	LINE/CR1	(66)	4033	3700	3749574
33	9.6	0.0	0.0	chr7	130273579	130273624	(29072349)	+	(AC)n	Simple_repeat	1	46	(0)	3750882
27	8.2	0.0	0.0	chr7	130273663	130273701	(29072272)	+	(T)n	Simple_repeat	1	39	(0)	3750883
15	29.3	0.0	0.0	chr7	131108191	131108237	(28237736)	+	(GCA)n	Simple_repeat	1	47	(0)	3752136
2326	28.4	9.9	6.3	chr7	131351723	131352874	(27993099)	C	L1MC5	LINE/L1	(634)	8670	7466	3752652
4619	19.8	4.5	4.0	chr7	131352985	131354601	(27991372)	C	L1MD	LINE/L1	(570)	5789	4178	3752654
288	35.9	4.2	0.0	chr7	137893923	137894014	(21451959)	C	MER115	DNA/hAT-Tip100	(165)	528	433	3762547
1558	21.6	6.1	1.6	chr7	137894020	137894396	(21451577)	+	LTR40c	LTR/ERVL	2	396	(69)	3762548
1847	21.7	4.7	6.6	chr7	138461977	138462338	(20883635)	+	LTR40a	LTR/ERVL	4	365	(154)	3763678
2872	0.3	0.0	0.0	chr7	138462339	138462639	(20883334)	C	AluY	SINE/Alu	(10)	301	1	3763679
2413	4.5	0.0	0.0	chr7	139500339	139500629	(19845344)	+	AluY	SINE/Alu	1	291	(20)	3765729
371	28.8	12.0	2.9	chr7	144835294	144835497	(14510476)	C	MIRb	SINE/MIR	(23)	245	21	3773750
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
13	19.5	0.0	2.7	chr7	152759662	152759698	(6586275)	+	G-rich	Low_complexity	1	37	(0)	3785945
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
3548	13.6	3.6	13.2	chr7	157288182	157288735	(2057238)	C	MER4A	LTR/ERV1	(166)	498	1	3792204
1493	26.1	4.3	2.2	chr7	157288736	157289148	(2056825)	C	LTR40b	LTR/ERVL	(34)	428	2	3792203
17	0.0	0.0	0.0	chr7	158469736	158469754	(876219)	+	(A)n	Simple_repeat	1	19	(0)	3793278
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
418	30.6	9.9	4.9	chr8	18081890	18082195	(127056441)	C	Charlie18a	DNA/hAT-Charlie	(19)	323	1	3819160
2149	14.3	2.1	3.7	chr8	42209089	42209538	(102929098)	+	L1PB4	LINE/L1	5522	5968	(163)	3858343
17	6.5	6.2	0.0	chr8	42209769	42209800	(102928836)	+	(GAAAA)n	Simple_repeat	1	34	(0)	3858344
1583	14.6	3.9	1.4	chr8	43093803	43094077	(102044559)	+	AluJb	SINE/Alu	1	282	(30)	3860104
19	6.9	3.2	0.0	chr8	43094078	43094108	(102044528)	+	(TAT)n	Simple_repeat	1	32	(0)	3860105
1637	5.7	20.1	0.0	chr8	43094109	43094335	(102044301)	C	AluSx1	SINE/Alu	(27)	285	2	3860106
1854	20.6	3.1	2.1	chr8	43372801	43373326	(101765310)	+	MER4-int	LTR/ERV1	107	686	(5912)	3860460
435	16.5	0.0	6.6	chr8	43373313	43373418	(101765218)	+	MER4-int	LTR/ERV1	949	1039	(7231)	3860460
259	15.6	0.0	2.2	chr8	43373465	43373510	(101765126)	+	LTR49	LTR/ERV1	265	309	(286)	3860461
577	24.6	13.8	1.3	chr8	43373512	43373738	(101764898)	+	MER4-int	LTR/ERV1	861	1120	(5478)	3860460
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
28363	1.9	0.3	0.1	chr8	66949104	66955119	(78183517)	C	L1PA2	LINE/L1	(0)	6155	125	3888433
15026	16.6	5.1	2.2	chr8	67244600	67248710	(77889926)	+	L1M1	LINE/L1	2351	6633	(929)	3888951
302	24.4	17.8	0.6	chr8	71098243	71098423	(74040213)	C	L1MD	LINE/L1	(2846)	3300	3082	3894775
2140	11.2	0.3	3.1	chr8	101206361	101206681	(43931955)	+	AluJb	SINE/Alu	1	312	(0)	3938343
62	8.4	0.0	0.0	chr8	102730862	102730950	(42407686)	+	(GTGTGT)n	Simple_repeat	1	89	(0)	3940995
887	14.4	0.8	0.0	chr8	102730951	102731082	(42407554)	C	AluJb	SINE/Alu	(179)	133	1	3940994
1441	25.6	8.6	2.2	chr8	102731086	102731672	(42406964)	+	L2a	LINE/L2	2795	3417	(9)	3940992
3198	21.9	4.8	4.0	chr8	106103648	106104556	(39034080)	C	ERV3-16A3_I-int	LTR/ERVL	(2162)	3064	2148	3946026
2293	12.4	0.0	0.0	chr8	123670583	123670889	(21467747)	+	AluSz6	SINE/Alu	5	311	(1)	3972350
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
2459	23.7	6.2	1.4	chr9	15231923	15232688	(123162029)	+	L1PB4	LINE/L1	1269	1999	(4854)	4030130
181	31.0	4.4	2.2	chr9	20356431	20356519	(118038198)	+	AmnSINE1	SINE/5S-Deu-L2	76	166	(409)	4037775
918	14.7	0.0	0.0	chr9	20435213	20435341	(117959376)	C	FLAM_A	SINE/Alu	(12)	130	2	4037873
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
1965	21.1	4.5	0.7	chr9	84222182	84222624	(54172093)	C	LTR40b	LTR/ERVL	(1)	461	1	4104275
723	26.7	6.4	0.0	chr9	84222670	84222875	(54171842)	+	MIR	SINE/MIR	12	231	(31)	4104276
2355	6.8	0.0	0.0	chr9	93082311	93082616	(45312101)	C	AluY	SINE/Alu	(0)	311	1	4117686
1519	11.5	0.9	2.3	chr9	94726231	94726447	(43668270)	C	AluJo	SINE/Alu	(15)	297	84	4120189
30	31.8	0.0	0.0	chr9	96344510	96344599	(42050118)	+	GA-rich	Low_complexity	1	90	(0)	4122675
17	10.0	3.1	0.0	chr9	96344712	96344743	(42049974)	+	(GGGGGA)n	Simple_repeat	1	33	(0)	4122676
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
1964	13.6	2.9	3.9	chr9	123869719	123870027	(14524690)	+	AluJb	SINE/Alu	1	306	(6)	4171404
2271	9.9	0.6	1.3	chr9	125279289	125279601	(13115116)	+	AluSz	SINE/Alu	1	311	(1)	4174340
2070	12.8	0.3	0.7	chr9	125279765	125280061	(13114656)	C	AluSx	SINE/Alu	(16)	296	1	4174341
235	31.3	2.9	2.0	chr9	127715889	127715989	(10678728)	+	MIR1_Amn	SINE/MIR	45	146	(84)	4178853
2977	22.7	9.6	3.0	chr9	133596456	133597924	(4796793)	+	L1MEc	LINE/L1	108	1664	(4720)	4190818
23	8.2	2.6	0.0	chrX	19515659	19515697	(136525198)	+	(GTTTTTT)n	Simple_repeat	1	40	(0)	4391496
5162	13.2	0.6	2.6	chrX	23883104	23883918	(132156977)	+	LTR1A1	LTR/ERV1	1	799	(0)	4398309
254	26.9	13.0	2.1	chrX	23883974	23884117	(132156778)	C	L2c	LINE/L2	(312)	3075	2914	4398306
274	21.9	11.9	1.0	chrX	23884435	23884452	(132156443)	+	L1MA1	LINE/L1	5912	5937	(365)	4398310
12	25.3	2.4	0.0	chrX	24054205	24054246	(131986649)	+	(AACA)n	Simple_repeat	1	43	(0)	4398695
1921	16.7	0.0	2.3	chrX	30735553	30735857	(125305038)	C	AluJb	SINE/Alu	(14)	298	1	4408703
2654	5.8	0.0	0.0	chrX	49099500	49099810	(106941085)	+	AluY	SINE/Alu	1	311	(0)	4437492
2260	10.8	0.7	2.2	chrX	70122067	70122380	(85918515)	+	AluSq2	SINE/Alu	2	310	(3)	4459147
48	3.5	3.4	0.0	chrX	70122389	70122447	(85918448)	+	(CTCTCC)n	Simple_repeat	1	61	(0)	4459148
10304	4.1	0.7	8.0	chrX	70122448	70123902	(85916993)	+	SVA_B	Retroposon/SVA	35	1383	(0)	4459149
2206	13.4	0.0	0.0	chrX	72435686	72435983	(83604912)	+	AluSz	SINE/Alu	1	298	(14)	4463372
5742	17.3	5.7	2.1	chrX	72435984	72436626	(83604269)	+	L1MDa	LINE/L1	1416	2060	(4573)	4463371
15	5.5	0.0	0.0	chrX	73852100	73852118	(82188777)	+	(A)n	Simple_repeat	1	19	(0)	4464814
365	27.2	14.4	3.9	chrX	73943786	73943965	(82096930)	+	MIRc	SINE/MIR	25	226	(42)	4464969
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
265	28.4	7.8	4.0	chrX	107893874	107893972	(48146923)	C	L2c	LINE/L2	(1)	3386	3284	4505004
421	26.1	12.5	11.8	chrX	107894001	107894258	(48146637)	+	L2c	LINE/L2	3117	3361	(14)	4505005
488	27.6	3.8	0.0	chrX	109891168	109891294	(46149601)	+	MER91A	DNA/hAT-Tip100	28	159	(37)	4507524
247	0.0	0.0	0.0	chrX	123858810	123858845	(32182050)	C	Alu	SINE/Alu	(0)	301	266	4527537
2202	19.7	4.7	7.6	chrX	136793186	136793706	(19247189)	+	Zaphod2	DNA/hAT-Tip100	2992	3524	(0)	4546598
2407	28.1	7.5	3.5	chrX	136793708	136794524	(19246371)	+	L2a	LINE/L2	2101	2952	(467)	4546589
333	21.9	3.0	0.0	chrY	10663511	10663574	(46563841)	C	AluYj4	SINE/Alu	(22)	289	224	4587921
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057