372	23.5	7.5	0.7	chr1	1422514	1422650	(247533772)	C	LTR75	LTR/ERVL	(294)	268	122	1721
3836	13.6	5.4	0.8	chr1	1422773	1423374	(247533048)	+	MER41B	LTR/ERV1	4	634	(0)	1722
29	23.2	2.9	0.0	chr1	8169782	8169850	(240786572)	+	GA-rich	Low_complexity	1	71	(0)	11072
4124	11.5	1.8	0.5	chr1	9077842	9078453	(239877969)	C	MER41B	LTR/ERV1	(14)	620	1	12902
922	13.3	0.0	0.0	chr1	9078454	9078596	(239877826)	+	L1PB2	LINE/L1	6001	6143	(8)	12903
1190	18.5	8.5	0.0	chr1	9078609	9078867	(239877555)	C	LTR23	LTR/ERV1	(154)	283	1	12897
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
33	3.1	0.0	0.0	chr1	12433918	12433950	(236522472)	+	(GA)n	Simple_repeat	1	33	(0)	19789
1046	10.4	0.0	0.0	chr1	12456222	12456355	(236500067)	+	AluSg	SINE/Alu	1	134	(176)	19821
2328	11.6	0.3	0.0	chr1	12456356	12456665	(236499757)	+	AluSz	SINE/Alu	1	311	(1)	19822
279	27.4	1.2	0.0	chr1	12594900	12594983	(236361439)	C	L2a	LINE/L2	(825)	2594	2510	20050
2327	6.0	0.0	0.7	chr1	12597096	12597376	(236359046)	C	AluSg4	SINE/Alu	(31)	279	1	20053
716	23.1	8.6	0.5	chr1	12599787	12599990	(236356432)	+	MIR	SINE/MIR	35	256	(6)	20058
330	31.6	9.2	5.6	chr1	12603371	12603568	(236352854)	C	Charlie15a	DNA/hAT-Charlie	(14)	210	5	20067
185	27.5	12.5	1.1	chr1	12604654	12604745	(236351677)	+	MIRb	SINE/MIR	14	117	(151)	20069
2086	7.0	1.7	10.9	chr1	12604769	12605097	(236351325)	+	AluSc	SINE/Alu	1	298	(11)	20070
22	10.1	0.0	0.0	chr1	12617515	12617546	(236338876)	+	(A)n	Simple_repeat	1	32	(0)	20094
505	32.9	9.0	0.0	chr1	14945936	14946157	(234010265)	C	MIR	SINE/MIR	(8)	254	11	24221
278	26.2	2.4	0.0	chr1	14946148	14946227	(234010195)	C	MIR1_Amn	SINE/MIR	(66)	164	83	24222
254	28.3	4.2	3.2	chr1	15796641	15796735	(233159687)	C	MIRb	SINE/MIR	(61)	207	112	26057
816	19.9	0.0	0.6	chr1	15796908	15797069	(233159353)	+	L1MD3	LINE/L1	7725	7885	(110)	26058
2273	11.4	0.3	0.0	chr1	15892817	15893122	(233063300)	+	AluSq2	SINE/Alu	1	307	(6)	26298
886	30.0	8.4	5.5	chr1	16614267	16614887	(232341535)	+	L2b	LINE/L2	2508	3162	(213)	27821
316	18.8	7.2	0.0	chr1	16896598	16896661	(232059761)	C	MER45B	DNA/hAT-Tip100	(660)	380	312	28205
508	23.3	8.9	0.6	chr1	16896667	16896830	(232059592)	+	LTR75B	LTR/ERVL	5	183	(425)	28206
234	35.9	3.3	0.7	chr1	16914490	16914635	(232041787)	C	MIRb	SINE/MIR	(23)	245	96	28247
313	32.1	7.7	9.6	chr1	19010650	19010983	(229945439)	+	LTR88a	LTR/Gypsy?	480	806	(10)	32917
343	30.9	18.5	0.6	chr1	23394263	23394444	(225561978)	+	MIRb	SINE/MIR	29	250	(18)	42303
2421	17.3	1.2	13.7	chr1	24544004	24544461	(224411961)	C	MER41C	LTR/ERV1	(121)	400	1	45131
1898	22.2	13.2	4.6	chr1	24544462	24545159	(224411263)	+	L1ME5	LINE/L1	5243	6008	(186)	45130
2389	8.2	0.0	0.0	chr1	28328414	28328707	(220627715)	C	AluSz	SINE/Alu	(18)	294	1	53910
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
181	10.0	3.2	0.0	chr1	28510632	28510661	(220445761)	C	L2a	LINE/L2	(28)	3398	3368	54384
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
1491	16.6	5.7	8.2	chr1	28649355	28649386	(220307036)	+	L1M4	LINE/L1	4963	4993	(1153)	54784
2455	7.6	0.3	0.3	chr1	28649387	28649689	(220306733)	+	AluSp	SINE/Alu	1	303	(10)	54785
2927	19.7	2.2	12.8	chr1	31171162	31171364	(217785058)	+	LTR8	LTR/ERV1	1	192	(499)	60029
2376	7.8	0.0	0.3	chr1	31171365	31171660	(217784762)	C	AluY	SINE/Alu	(15)	296	2	60030
462	27.7	3.0	1.3	chr1	31609468	31609662	(217346760)	+	HAL1ME	LINE/L1	1607	1826	(639)	61012
666	26.0	2.5	4.2	chr1	31609940	31610180	(217346242)	+	HAL1ME	LINE/L1	1875	2111	(354)	61012
2169	12.2	0.0	0.3	chr1	33098771	33099064	(215857358)	C	AluSx1	SINE/Alu	(19)	293	1	64441
13	8.7	4.0	0.0	chr1	33099271	33099295	(215857127)	+	(CCCT)n	Simple_repeat	1	26	(0)	64442
438	24.0	18.6	1.0	chr1	36450757	36450962	(212505460)	+	MIRb	SINE/MIR	3	260	(8)	70904
375	36.8	5.4	3.3	chr1	43472110	43472738	(205483684)	C	ERVL-B4-int	LTR/ERVL	(5007)	660	30	84355
798	29.6	3.9	2.5	chr1	43472757	43473033	(205483389)	C	LTR33	LTR/ERVL	(0)	515	235	84359
554	28.1	16.3	0.7	chr1	43821866	43822159	(205134263)	C	L2a	LINE/L2	(2)	3424	3076	84994
731	16.3	0.0	2.8	chr1	44730545	44730685	(204225737)	+	AluJr	SINE/Alu	175	311	(1)	86587
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
607	30.6	8.0	0.0	chr1	52574387	52574592	(196381830)	+	MIRb	SINE/MIR	25	248	(20)	101145
510	35.7	7.8	3.4	chr1	52574593	52574972	(196381450)	+	L2c	LINE/L2	2990	3387	(0)	101146
874	25.1	6.9	1.2	chr1	52574973	52575218	(196381204)	C	MIR	SINE/MIR	(0)	262	2	101147
281	31.7	8.4	7.9	chr1	55718664	55718865	(193237557)	C	L2c	LINE/L2	(174)	3213	3011	107623
549	36.4	4.1	1.5	chr1	58883472	58883878	(190072544)	+	L3	LINE/CR1	3462	3879	(220)	113731
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
638	28.6	1.2	1.2	chr1	59707168	59707333	(189249089)	C	MIRb	SINE/MIR	(69)	199	34	115320
353	23.3	0.0	0.0	chr1	63920912	63920984	(185035438)	C	MIR	SINE/MIR	(11)	251	179	122943
299	17.1	11.4	0.0	chr1	63987288	63987357	(184969065)	+	MIRb	SINE/MIR	182	260	(8)	123079
329	25.5	15.7	5.6	chr1	64039838	64039945	(184916477)	+	MER131	DNA?	23	143	(72)	123184
1986	15.0	8.4	1.4	chr1	64240955	64241387	(184715035)	C	LTR54B	LTR/ERV1	(32)	466	1	123538
311	29.3	3.9	0.0	chr1	65340032	65340130	(183616292)	C	MIR3	SINE/MIR	(22)	186	84	125618
243	16.7	0.0	2.0	chr1	67399706	67399754	(181556668)	+	MER21A	LTR/ERVL	1	48	(883)	128773
4127	10.1	2.9	7.5	chr1	67399759	67400223	(181556199)	+	MER41B	LTR/ERV1	1	450	(184)	128774
4378	10.5	0.6	1.1	chr1	68384988	68385624	(180570798)	+	MER41B	LTR/ERV1	1	634	(0)	130578
1784	31.2	15.7	1.3	chr1	68420848	68421844	(180534578)	+	L2a	LINE/L2	10	1176	(2243)	130640
653	35.3	11.5	4.4	chr1	69976562	69977229	(178979193)	+	L2c	LINE/L2	1985	2687	(732)	132699
3288	14.2	1.0	1.7	chr1	72000825	72001353	(176955069)	+	MER61E	LTR/ERV1	1	525	(44)	135645
344	23.5	7.2	0.0	chr1	75766463	75766579	(173189843)	C	LTR37A	LTR/ERV1	(63)	405	239	140421
432	29.5	9.1	3.9	chr1	77509875	77510103	(171446319)	C	MIR	SINE/MIR	(1)	261	20	143008
390	18.3	1.2	0.0	chr1	78146507	78146588	(170809834)	C	Helitron3Na_Mam	RC/Helitron	(167)	319	237	144178
265	30.5	0.0	0.0	chr1	78146648	78146729	(170809693)	C	Helitron3Na_Mam	RC/Helitron	(238)	248	167	144179
250	17.8	0.0	0.0	chr1	80054081	80054125	(168902297)	+	HERVL18-int	LTR/ERVL	5946	5990	(57)	146672
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
241	14.5	6.1	3.1	chr1	83043381	83043444	(165912978)	C	MER121	DNA/hAT?	(184)	217	152	150664
441	31.6	14.6	3.3	chr1	83960232	83960594	(164995828)	C	L2	LINE/L2	(556)	2863	2453	151884
15	24.2	0.0	0.0	chr1	85277005	85277044	(163679378)	+	(CACA)n	Simple_repeat	1	40	(0)	153918
232	25.6	0.0	0.0	chr1	85277045	85277122	(163679300)	C	L1ME4c	LINE/L1	(13)	817	740	153919
255	27.4	14.5	0.9	chr1	85277178	85277284	(163679138)	+	MIRb	SINE/MIR	125	248	(20)	153920
1745	11.9	7.3	1.1	chr1	85277292	85277559	(163678863)	C	AluJb	SINE/Alu	(16)	296	11	153921
180	12.1	0.0	8.3	chr1	85277576	85277611	(163678811)	C	MIR	SINE/MIR	(10)	252	220	153922
537	30.9	8.0	4.6	chr1	89563693	89563909	(159392513)	C	MIR	SINE/MIR	(3)	259	35	160023
721	30.5	12.8	0.9	chr1	96416048	96416378	(152540044)	C	MLT1J2	LTR/ERVL-MaLR	(6)	442	67	170627
928	32.3	10.4	4.5	chr1	97277443	97277974	(151678448)	+	L2	LINE/L2	2453	3019	(400)	171840
12	20.4	4.1	3.9	chr1	98920963	98921011	(150035411)	+	(TATACT)n	Simple_repeat	1	51	(0)	174110
2635	11.4	12.6	3.7	chr1	98982245	98982707	(149973715)	+	LTR54	LTR/ERV1	1	510	(0)	174211
1036	25.5	9.3	2.9	chr1	99179695	99180344	(149776078)	+	L1M5	LINE/L1	2786	3481	(2665)	174479
183	36.6	1.8	4.3	chr1	102691573	102691689	(146264733)	+	L2c	LINE/L2	3208	3321	(66)	179647
4182	8.5	0.0	0.4	chr1	102774731	102775286	(146181136)	C	MER41A	LTR/ERV1	(0)	554	1	179756
364	32.1	10.5	5.8	chr1	102892435	102892606	(146063816)	+	MIRb	SINE/MIR	8	188	(80)	179876
457	28.2	3.5	12.0	chr1	109877951	109878271	(139078151)	+	L2a	LINE/L2	3109	3407	(19)	189215
4051	10.7	0.2	0.0	chr1	110031079	110031631	(138924791)	C	MER41A	LTR/ERV1	(0)	554	1	189448
181	17.6	0.0	0.0	chr1	110031638	110031671	(138924751)	C	MIRc	SINE/MIR	(106)	162	129	189449
1656	15.2	8.1	0.7	chr1	114582047	114582322	(134374100)	C	AluJr	SINE/Alu	(10)	302	5	196898
694	24.2	5.7	2.9	chr1	116504850	116505053	(132451369)	+	MIRb	SINE/MIR	40	249	(19)	199808
740	13.9	0.9	0.0	chr1	116505055	116505162	(132451260)	+	FLAM_C	SINE/Alu	25	133	(10)	199809
2310	10.4	4.2	0.0	chr1	117821693	117822010	(131134412)	C	LTR18C	LTR/ERVL	(13)	332	1	201836
438	32.6	0.0	4.3	chr1	117822012	117822152	(131134270)	+	MER5A	DNA/hAT-Charlie	55	189	(0)	201837
279	25.9	11.2	8.7	chr1	117822168	117822340	(131134082)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	201838
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
642	18.1	19.5	15.4	chr1	144413100	144413392	(104543030)	C	AluSz	SINE/Alu	(0)	312	5	209363
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
595	17.9	19.5	14.5	chr1	145281642	145281931	(103674491)	C	AluSz	SINE/Alu	(0)	312	5	210765
1401	10.0	0.4	15.3	chr1	146051578	146051756	(102904666)	+	AluSz	SINE/Alu	115	255	(57)	212029
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
294	17.2	7.2	3.0	chr1	146377412	146377477	(102578945)	C	MER45B	DNA/hAT-Tip100	(660)	380	312	212534
294	25.6	9.4	2.0	chr1	146377481	146377645	(102578777)	+	LTR75	LTR/ERVL	4	183	(425)	212535
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
1169	18.3	7.2	7.8	chr1	146387818	146388125	(102568297)	+	LTR4	LTR/ERV1	291	596	(0)	212561
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
2347	7.7	0.0	0.7	chr1	146410352	146410648	(102545774)	+	AluY	SINE/Alu	2	296	(15)	212615
550	26.6	1.2	3.6	chr1	147539386	147539553	(101416869)	+	MIR	SINE/MIR	4	167	(95)	214253
16	0.0	4.3	0.0	chr1	147539606	147539645	(101416777)	+	(TTA)n	Simple_repeat	1	41	(0)	214254
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
262	34.6	7.1	0.0	chr1	149979087	149979190	(98977232)	+	L2b	LINE/L2	3262	3373	(2)	218083
211	29.7	12.2	1.0	chr1	149979394	149979495	(98976927)	+	MIR3	SINE/MIR	73	187	(21)	218084
326	30.4	5.0	0.9	chr1	150613485	150613600	(98342822)	+	MIR3	SINE/MIR	81	201	(7)	219464
1684	16.6	2.0	0.7	chr1	150613986	150614274	(98342148)	C	AluJr	SINE/Alu	(15)	297	5	219465
13	29.7	3.1	1.5	chr1	151717312	151717375	(97239047)	+	GA-rich	Low_complexity	1	66	(0)	221784
293	36.2	0.0	0.0	chr1	152183309	152183402	(96773020)	+	MIR3	SINE/MIR	39	132	(76)	222497
1911	5.5	1.2	5.2	chr1	153567250	153567520	(95388902)	+	L1PA8	LINE/L1	5909	6168	(4)	224295
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
988	21.0	2.3	4.0	chr1	155319978	155320200	(93636222)	+	MER20	DNA/hAT-Charlie	1	219	(0)	227739
401	28.1	11.7	2.9	chr1	155941017	155941230	(93015192)	C	MIRc	SINE/MIR	(41)	227	3	229152
196	14.9	6.0	0.0	chr1	156143714	156143760	(92812662)	+	L2a	LINE/L2	1383	1432	(1987)	229576
364	33.8	1.4	0.7	chr1	156143763	156143905	(92812517)	+	L2a	LINE/L2	1919	2062	(1357)	229576
2627	26.0	9.1	1.8	chr1	156143926	156144359	(92812063)	+	L2a	LINE/L2	2175	2651	(768)	229576
2295	10.4	0.3	0.3	chr1	156144360	156144666	(92811756)	+	AluSx	SINE/Alu	1	307	(5)	229577
231	28.1	15.1	1.0	chr1	156457093	156457189	(92499233)	C	L2c	LINE/L2	(14)	3373	3261	230180
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
2494	6.0	0.0	0.0	chr1	156505620	156505917	(92450505)	+	AluSx4	SINE/Alu	2	299	(11)	230245
277	32.1	3.1	6.2	chr1	156677642	156677835	(92278587)	+	MIRb	SINE/MIR	3	194	(74)	230550
39	2.7	0.0	0.0	chr1	156677982	156678019	(92278403)	+	(AC)n	Simple_repeat	1	38	(0)	230551
406	28.4	5.3	9.6	chr1	156897103	156897320	(92059102)	C	L2b	LINE/L2	(1)	3374	3167	230949
14	8.8	0.0	0.0	chr1	158999078	158999101	(89957321)	+	(TGCG)n	Simple_repeat	1	24	(0)	233758
679	21.7	0.7	0.7	chr1	159009652	159009804	(89946618)	C	L1PB4	LINE/L1	(2)	6154	6002	233781
14	24.1	0.0	0.0	chr1	159882383	159882421	(89074001)	+	(ATTT)n	Simple_repeat	1	39	(0)	234890
869	28.9	1.2	6.5	chr1	161046495	161046757	(87909665)	+	MIRb	SINE/MIR	5	253	(15)	236761
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
721	32.2	6.0	0.0	chr1	161216916	161217151	(87739271)	+	MIRc	SINE/MIR	9	259	(9)	237095
2225	6.4	0.7	2.7	chr1	161389205	161389500	(87566922)	+	AluSp	SINE/Alu	9	298	(15)	237439
232	30.4	4.7	4.7	chr1	161389531	161389637	(87566785)	C	MER103C	DNA/hAT-Charlie	(123)	174	68	237440
13	17.2	4.9	2.3	chr1	161389847	161389887	(87566535)	+	(CTCCG)n	Simple_repeat	1	43	(0)	237441
19	12.4	0.0	0.0	chr1	161399246	161399280	(87557142)	+	(GCCGGA)n	Simple_repeat	1	35	(0)	237469
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
185	25.0	2.4	0.0	chr1	162928339	162928378	(86028044)	+	MIRb	SINE/MIR	23	63	(205)	239965
825	25.8	7.7	5.4	chr1	163034982	163035260	(85921162)	+	MLT1J	LTR/ERVL-MaLR	224	509	(3)	240141
283	31.1	16.1	1.6	chr1	163035342	163035527	(85920895)	C	MIRb	SINE/MIR	(30)	238	21	240143
261	36.5	10.5	8.3	chr1	163171733	163172058	(85784364)	C	L2b	LINE/L2	(0)	3375	3042	240348
1141	24.8	0.8	2.4	chr1	163202246	163202497	(85753925)	C	MIR	SINE/MIR	(0)	262	15	240390
350	26.1	2.3	4.4	chr1	164748107	164748242	(84208180)	+	LTR90A	LTR	282	414	(562)	242583
558	25.9	6.9	0.0	chr1	164748525	164748659	(84207763)	+	LTR90A	LTR	823	967	(9)	242583
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
1579	20.4	3.1	6.2	chr1	168178010	168178313	(80778109)	+	MER4D	LTR/ERV1	608	903	(0)	247952
230	22.8	9.4	7.3	chr1	168178315	168178421	(80778001)	C	MIR3	SINE/MIR	(57)	151	40	247955
1148	13.7	0.0	0.0	chr1	168225441	168225608	(80730814)	C	AluJo	SINE/Alu	(11)	301	134	248046
47	5.0	0.0	1.5	chr1	168456973	168457037	(80499385)	+	(TTCC)n	Simple_repeat	1	65	(0)	248435
101	3.4	1.6	2.3	chr1	168457039	168457165	(80499257)	+	(TTCT)n	Simple_repeat	1	129	(0)	248436
4042	7.2	2.8	1.4	chr1	168457166	168457732	(80498690)	+	LTR14C	LTR/ERVK	12	586	(1)	248437
919	19.6	0.0	1.7	chr1	168469971	168470146	(80486276)	+	MIR	SINE/MIR	90	262	(0)	248452
14	7.8	3.7	0.0	chr1	169113663	169113689	(79842733)	+	(TCCCT)n	Simple_repeat	1	28	(0)	249457
295	25.3	0.0	3.1	chr1	169161320	169161417	(79795005)	+	MamRep564	Unknown	194	288	(69)	249541
4088	14.8	9.9	0.5	chr1	169161571	169162311	(79794111)	+	LTR8B	LTR/ERV1	1	818	(2)	249542
261	29.9	0.0	10.5	chr1	169866707	169866792	(79089630)	+	L2b	LINE/L2	3282	3358	(17)	250569
1215	29.6	6.2	3.4	chr1	170682619	170683312	(78273110)	C	L2b	LINE/L2	(1)	3374	2651	251630
240	32.4	13.9	0.7	chr1	170700884	170701024	(78255398)	+	MIRb	SINE/MIR	33	200	(68)	251659
265	28.9	9.7	5.4	chr1	170701193	170701360	(78255062)	+	L2c	LINE/L2	3182	3357	(30)	251660
235	25.0	3.3	13.7	chr1	170717384	170717485	(78238937)	+	L3b	LINE/CR1	4944	5034	(198)	251678
46	0.0	0.0	0.0	chr1	172181376	172181414	(76775008)	+	(AC)n	Simple_repeat	1	39	(0)	253911
187	20.4	0.0	2.0	chr1	172286627	172286676	(76669746)	+	L2	LINE/L2	2369	2417	(1002)	254040
4272	19.7	10.3	0.8	chr1	172356790	172357809	(76598613)	+	L1MC4a	LINE/L1	6758	7873	(9)	254129
356	32.2	6.1	5.1	chr1	172550626	172551178	(76405244)	C	L1M5	LINE/L1	(2045)	4101	3543	254387
11801	9.7	5.0	2.6	chr1	172847553	172849787	(76106635)	C	LTR19-int	LTR/ERV1	(1121)	4465	1738	254791
640	17.6	20.1	4.1	chr1	172849788	172850008	(76106414)	+	LTR8	LTR/ERV1	1	257	(434)	254792
3729	4.5	1.6	0.2	chr1	172850009	172850499	(76105923)	C	LTR19-int	LTR/ERV1	(3366)	1649	1152	254791
182	27.2	6.9	2.4	chr1	172914833	172914915	(76041507)	C	L3b	LINE/CR1	(0)	5232	5146	254868
187	26.3	0.0	6.6	chr1	172915333	172915393	(76041029)	+	MER5B	DNA/hAT-Charlie	19	75	(103)	254869
1866	29.2	2.9	2.0	chr1	173266861	173267504	(75688918)	C	Charlie25	DNA/hAT-Charlie	(841)	1683	1034	255355
956	21.6	7.4	0.0	chr1	173267522	173267734	(75688688)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	340	255356
71	12.8	1.5	2.2	chr1	173267780	173267913	(75688509)	+	GA-rich	Low_complexity	1	136	(0)	255357
2794	17.1	3.5	0.4	chr1	173269308	173269812	(75686610)	C	Tigger7	DNA/TcMar-Tigger	(1970)	521	1	255361
1974	28.6	6.6	1.6	chr1	173269818	173270657	(75685765)	C	L2	LINE/L2	(572)	2847	1259	255362
471	23.2	7.2	1.3	chr1	173474081	173474237	(75482185)	C	Charlie8	DNA/hAT-Charlie	(1934)	494	328	255654
387	20.0	10.8	6.0	chr1	173474275	173474423	(75481999)	C	Charlie8	DNA/hAT-Charlie	(2185)	243	87	255654
5753	13.5	2.4	0.6	chr1	173474425	173475408	(75481014)	+	LTR5B	LTR/ERVK	1	1002	(0)	255655
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
5213	6.9	3.6	0.0	chr1	178610724	178611389	(70345033)	C	LTR8	LTR/ERV1	(0)	691	1	263336
2266	10.4	0.0	2.3	chr1	178611424	178611731	(70344691)	+	AluSz	SINE/Alu	1	301	(11)	263337
1271	20.2	8.8	11.3	chr1	179169698	179169766	(69786656)	C	MSTD	LTR/ERVL-MaLR	(0)	396	338	264270
1458	17.4	7.8	1.1	chr1	179169767	179170030	(69786392)	+	AluJr	SINE/Alu	6	288	(24)	264271
1271	20.2	8.8	11.3	chr1	179170031	179170367	(69786055)	C	MSTD	LTR/ERVL-MaLR	(59)	337	1	264270
2143	11.2	0.0	4.8	chr1	179178608	179178918	(69777504)	+	AluSx1	SINE/Alu	1	296	(16)	264290
15	11.8	5.1	2.4	chr1	180516376	180516414	(68440008)	+	(CTTTTG)n	Simple_repeat	1	41	(0)	266492
2331	7.5	0.7	0.0	chr1	180680358	180680661	(68275761)	C	AluSc	SINE/Alu	(0)	309	1	266794
6270	10.4	2.9	4.5	chr1	180680662	180681358	(68275064)	+	L1MA5A	LINE/L1	5612	6295	(2)	266793
764	22.9	6.7	0.0	chr1	181073462	181073614	(67882808)	C	FRAM	SINE/Alu	(10)	166	3	267422
325	34.1	11.9	0.6	chr1	181073704	181073874	(67882548)	C	MIR3	SINE/MIR	(14)	194	2	267423
255	36.7	1.3	7.5	chr1	181073884	181073978	(67882444)	C	L2b	LINE/L2	(7)	3368	3284	267424
2433	9.6	0.0	0.0	chr1	181073979	181074281	(67882141)	+	AluSx1	SINE/Alu	2	304	(8)	267425
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
241	34.3	5.4	3.6	chr1	183029639	183029804	(65926618)	+	L2c	LINE/L2	3147	3328	(59)	270462
1418	21.2	2.6	2.6	chr1	183029955	183030293	(65926129)	+	MER58B	DNA/hAT-Charlie	3	341	(0)	270463
520	30.4	5.0	12.5	chr1	183060449	183060752	(65895670)	+	L2c	LINE/L2	3108	3387	(0)	270508
180	32.2	4.8	13.5	chr1	183060897	183061104	(65895318)	C	L2	LINE/L2	(553)	2866	2678	270509
2040	11.2	3.6	6.2	chr1	183655948	183656348	(65300074)	+	MER57A-int	LTR/ERV1	5798	6187	(0)	271478
447	28.6	9.9	2.5	chr1	184755473	184755676	(64200746)	C	MIRb	SINE/MIR	(40)	228	8	273161
16	17.5	0.0	0.0	chr1	184802788	184802820	(64153602)	+	(GTA)n	Simple_repeat	1	33	(0)	273258
332	23.1	10.3	2.3	chr1	184802850	184802982	(64153440)	+	MIRb	SINE/MIR	36	180	(88)	273259
23	7.0	0.0	0.0	chr1	184867141	184867170	(64089252)	+	(CT)n	Simple_repeat	1	30	(0)	273356
30	5.0	2.3	2.3	chr1	184867171	184867213	(64089209)	+	(CA)n	Simple_repeat	1	44	(0)	273357
354	35.1	2.3	2.8	chr1	184889222	184889397	(64067025)	C	MIR3	SINE/MIR	(7)	201	27	273390
1966	15.1	1.3	0.3	chr1	185400537	185400841	(63555581)	+	AluJb	SINE/Alu	1	308	(4)	274193
308	26.7	12.1	0.8	chr1	185663881	185664012	(63292410)	C	L2c	LINE/L2	(5)	3382	3234	274597
34	3.0	0.0	0.0	chr1	185664185	185664218	(63292204)	+	(AC)n	Simple_repeat	1	34	(0)	274598
1252	33.5	9.2	3.9	chr1	186041830	186042635	(62913787)	C	MamRep1527	LTR	(4)	965	113	275091
12	22.1	0.0	0.0	chr1	186627311	186627342	(62329080)	+	A-rich	Low_complexity	1	32	(0)	275859
2921	16.1	1.3	4.2	chr1	187408015	187408559	(61547863)	C	MER61E	LTR/ERV1	(40)	529	1	276975
852	13.6	0.8	0.0	chr1	187408560	187408684	(61547738)	+	MER4A1	LTR/ERV1	347	472	(0)	276974
12	13.8	2.8	5.4	chr1	187471573	187471608	(61484814)	+	(TGTAA)n	Simple_repeat	1	37	(0)	277062
2280	21.7	5.5	0.8	chr1	187870563	187871165	(61085257)	C	L1MC2	LINE/L1	(3109)	3455	2823	277587
946	26.6	8.4	6.8	chr1	187871180	187871699	(61084723)	+	LTR38B	LTR/ERV1	28	592	(18)	277589
3756	24.0	6.0	3.4	chr1	187871748	187873420	(61083002)	C	L1MC2	LINE/L1	(4942)	1809	2	277587
1074	22.5	6.3	1.7	chr1	188237898	188238186	(60718236)	C	MER65D	LTR/ERV1	(14)	459	157	278059
1954	32.6	9.5	2.6	chr1	188317319	188318625	(60637797)	C	L2a	LINE/L2	(0)	3426	1965	278144
3215	17.1	0.7	0.0	chr1	188386178	188386716	(60569706)	+	LTR38A1	LTR/ERV1	1	543	(0)	278228
1618	22.6	4.4	2.0	chr1	188386717	188386959	(60569463)	+	MLT1A0	LTR/ERVL-MaLR	114	365	(0)	278227
375	27.6	4.3	3.6	chr1	188652796	188652934	(60303488)	+	AmnSINE1	SINE/5S-Deu-L2	305	444	(131)	278571
315	20.8	0.0	6.5	chr1	188706755	188706831	(60249591)	C	AluJo	SINE/Alu	(19)	293	222	278638
2205	20.0	1.4	0.9	chr1	188706877	188707295	(60249127)	+	Tigger7	DNA/TcMar-Tigger	101	521	(1970)	278639
3356	31.5	3.4	5.8	chr1	188887880	188888422	(60068000)	+	L1MA8	LINE/L1	1932	2466	(5100)	278884
2854	20.9	5.3	4.7	chr1	188888423	188889119	(60067303)	+	MER44D	DNA/TcMar-Tigger	2	702	(3)	278885
2610	25.9	1.6	0.6	chr1	189606662	189607148	(59349274)	+	MER63C	DNA/hAT-Blackjack	6	497	(433)	279787
37	0.0	0.0	0.0	chr1	189607149	189607180	(59349242)	+	(CA)n	Simple_repeat	1	32	(0)	279788
2610	25.9	1.6	0.6	chr1	189607181	189607349	(59349073)	+	MER63C	DNA/hAT-Blackjack	498	669	(261)	279787
966	14.2	14.2	0.0	chr1	189607440	189607650	(59348772)	+	MER63D	DNA/hAT-Blackjack	816	1061	(0)	279789
284	34.2	3.2	2.0	chr1	192485834	192485985	(56470437)	+	MamSINE1	SINE/tRNA-RTE	72	225	(65)	283454
1721	18.9	8.0	0.6	chr1	192488777	192489137	(56467285)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	283459
616	26.1	1.5	0.0	chr1	192605596	192605725	(56350697)	+	AluJr	SINE/Alu	2	133	(179)	283616
39	26.3	3.1	2.3	chr1	192806185	192806312	(56150110)	+	(TA)n	Simple_repeat	1	132	(0)	283880
1421	21.8	4.8	2.8	chr1	193014478	193014841	(55941581)	C	L1M5	LINE/L1	(1020)	5126	4755	284225
13	13.7	0.0	0.0	chr1	193060087	193060111	(55896311)	+	(CTC)n	Simple_repeat	1	25	(0)	284288
16529	13.3	2.8	0.6	chr1	193943574	193945525	(55010897)	+	L1MA3	LINE/L1	5748	7723	(1)	285495
746	22.4	4.2	2.7	chr1	194150552	194150739	(54805683)	+	MLT1E1A	LTR/ERVL-MaLR	455	645	(35)	285766
278	36.7	15.7	0.5	chr1	194274637	194274825	(54681597)	+	MIRc	SINE/MIR	27	249	(19)	285924
12	5.5	0.0	0.0	chr1	196182204	196182222	(52774200)	+	(TTG)n	Simple_repeat	1	19	(0)	288329
506	23.3	7.0	3.6	chr1	196182223	196182360	(52774062)	+	MER54B	LTR/ERVL	511	653	(140)	288330
515	31.9	7.8	6.2	chr1	197017475	197017828	(51938594)	+	MLT1J	LTR/ERVL-MaLR	6	365	(147)	289369
1155	23.9	7.4	4.1	chr1	197017863	197018244	(51938178)	+	MLT1G1	LTR/ERVL-MaLR	174	593	(2)	289370
678	26.1	7.9	5.0	chr1	197684140	197684361	(51272061)	C	MIRb	SINE/MIR	(2)	266	38	290226
817	33.6	6.8	3.9	chr1	197862555	197863040	(51093382)	+	ERVL-E-int	LTR/ERVL	3270	3770	(1897)	290464
43	0.0	0.0	0.0	chr1	198289132	198289168	(50667254)	+	(TG)n	Simple_repeat	1	37	(0)	291027
302	27.7	13.2	4.3	chr1	198289421	198289537	(50666885)	C	MIR3	SINE/MIR	(13)	195	67	291028
406	27.6	10.5	0.2	chr1	198443677	198443841	(50512581)	+	MIR	SINE/MIR	13	196	(12)	291215
243	31.0	0.0	4.8	chr1	198658129	198658233	(50298189)	+	L2c	LINE/L2	3286	3385	(2)	291521
392	35.1	4.5	0.0	chr1	199122800	199122990	(49833432)	C	MER103C	DNA/hAT-Charlie	(94)	203	4	292081
1805	19.9	0.3	0.0	chr1	199123145	199123440	(49832982)	+	AluJo	SINE/Alu	1	297	(15)	292082
714	17.4	2.0	3.2	chr1	200352730	200352883	(48603539)	+	L1ME1	LINE/L1	5790	5941	(238)	294089
672	25.1	17.9	1.2	chr1	200379687	200380021	(48576401)	+	L1ME4c	LINE/L1	307	709	(121)	294145
1980	13.5	3.4	1.0	chr1	200443491	200443778	(48512644)	C	AluJb	SINE/Alu	(17)	295	1	294270
640	32.8	5.2	1.2	chr1	200443958	200444216	(48512206)	+	L4_A_Mam	LINE/RTE-X	4221	4490	(500)	294271
1592	17.2	4.7	7.8	chr1	200444215	200444586	(48511836)	C	L1MB8	LINE/L1	(0)	6178	5819	294272
2085	11.2	0.3	4.0	chr1	201502854	201503156	(47453266)	+	AluSz	SINE/Alu	2	293	(19)	296141
712	29.4	7.6	0.5	chr1	201504143	201504372	(47452050)	+	MIRb	SINE/MIR	6	258	(4)	296144
1024	25.8	5.4	0.4	chr1	201534835	201535079	(47421343)	+	MIR	SINE/MIR	5	262	(0)	296216
264	18.2	0.0	0.0	chr1	201552289	201552332	(47404090)	+	L2b	LINE/L2	3326	3369	(6)	296251
13	15.8	5.6	0.0	chr1	201696201	201696236	(47260186)	+	G-rich	Low_complexity	1	38	(0)	296494
527	25.3	13.5	0.5	chr1	201696726	201696912	(47259510)	+	MIRb	SINE/MIR	22	236	(32)	296495
639	25.6	4.0	1.8	chr1	201781396	201781566	(47174856)	C	MIRc	SINE/MIR	(25)	243	69	296625
235	19.6	3.5	1.8	chr1	201792096	201792152	(47164270)	+	MER121	DNA/hAT?	262	319	(82)	296636
749	6.8	0.0	3.7	chr1	202692991	202693097	(46263325)	C	L1PB1	LINE/L1	(1)	6150	6048	298322
2605	4.1	0.0	0.0	chr1	203006614	203006906	(45949516)	C	AluY	SINE/Alu	(18)	293	1	298912
593	29.7	12.1	2.5	chr1	203512462	203512865	(45443557)	C	L2a	LINE/L2	(1)	3425	2978	299737
2319	18.6	5.6	4.2	chr1	203599930	203600455	(45355967)	C	MER41A	LTR/ERV1	(20)	534	1	299917
2620	5.3	0.0	0.0	chr1	203861065	203861367	(45095055)	+	AluSc8	SINE/Alu	1	303	(8)	300474
1828	27.0	20.7	1.4	chr1	204417461	204418214	(44538208)	+	L2c	LINE/L2	941	1830	(1589)	301508
2463	7.4	0.0	0.0	chr1	204423168	204423464	(44532958)	+	AluSc	SINE/Alu	1	297	(12)	301518
550	21.8	17.9	6.2	chr1	204508159	204508217	(44448205)	+	L1ME4a	LINE/L1	5619	5674	(450)	301661
2410	7.8	0.0	0.7	chr1	204508218	204508526	(44447896)	+	AluSx3	SINE/Alu	5	311	(0)	301662
715	26.7	7.8	3.0	chr1	205750878	205751109	(43205313)	+	MIR	SINE/MIR	9	252	(10)	304034
391	28.8	8.5	10.2	chr1	207205148	207205437	(41750985)	+	MLT1J2	LTR/ERVL-MaLR	228	505	(7)	306345
233	22.2	4.7	3.6	chr1	207205440	207205523	(41750899)	C	HAL1	LINE/L1	(1786)	721	637	306344
309	31.3	3.8	7.4	chr1	207205530	207205691	(41750731)	C	HAL1b	LINE/L1	(483)	1938	1783	306347
3191	13.3	2.9	5.9	chr1	207219802	207220376	(41736046)	+	LTR61	LTR/ERV1	1	557	(2)	306360
1668	20.6	2.9	3.5	chr1	207220396	207220882	(41735540)	+	HERV3-int	LTR/ERV1	19	494	(8241)	306360
824	35.4	10.4	2.3	chr1	208008208	208009184	(40947238)	+	L2c	LINE/L2	2276	3356	(19)	307470
371	31.1	6.8	2.4	chr1	208461182	208461349	(40495073)	C	MIRc	SINE/MIR	(39)	229	54	308180
307	32.8	4.5	2.8	chr1	208929767	208929942	(40026480)	C	Tigger12c	DNA/TcMar-Tigger	(555)	179	1	308905
2794	15.9	5.4	3.6	chr1	209167690	209168053	(39788369)	+	L1MB7	LINE/L1	5486	5858	(326)	309249
2475	20.2	12.4	6.0	chr1	209168055	209168687	(39787735)	+	MER77B	LTR/ERVL	1	679	(21)	309251
1530	19.4	1.9	0.0	chr1	209168689	209168992	(39787430)	+	L1MB7	LINE/L1	5852	6161	(23)	309249
11	14.7	3.7	8.9	chr1	209389229	209389282	(39567140)	+	(CCATCC)n	Simple_repeat	1	56	(0)	309575
4467	7.6	0.2	0.0	chr1	209409970	209410522	(39545900)	+	MER41A	LTR/ERV1	1	554	(0)	309605
753	24.1	7.0	11.1	chr1	209567579	209567919	(39388503)	C	MLT1I	LTR/ERVL-MaLR	(39)	372	47	309850
3141	10.9	0.7	0.7	chr1	209567952	209568385	(39388037)	+	LTR47B4	LTR/ERVL	1	434	(0)	309851
199	30.5	2.8	7.2	chr1	209651126	209651277	(39305145)	+	MIR3	SINE/MIR	34	178	(90)	309989
15	20.3	0.0	0.0	chr1	209660225	209660259	(39296163)	+	GA-rich	Low_complexity	1	35	(0)	310000
512	18.4	14.2	1.8	chr1	209660607	209660772	(39295650)	C	MER53	DNA/hAT	(0)	193	4	310001
443	26.4	5.2	10.3	chr1	209688721	209688944	(39267478)	+	HAL1	LINE/L1	8	219	(2288)	310045
2837	28.2	9.0	8.2	chr1	209689021	209689458	(39266964)	+	HAL1	LINE/L1	426	856	(1651)	310045
314	36.8	6.4	7.2	chr1	209839701	209840063	(39116359)	C	L2b	LINE/L2	(6)	3369	3010	310268
768	25.2	7.0	2.5	chr1	209870752	209871060	(39085362)	C	LTR37B	LTR/ERV1	(20)	448	105	310312
21	4.0	0.0	0.0	chr1	209937533	209937558	(39018864)	+	(GT)n	Simple_repeat	1	26	(0)	310408
35	0.0	0.0	0.0	chr1	209937559	209937588	(39018834)	+	(GA)n	Simple_repeat	1	30	(0)	310409
21	8.8	0.0	2.6	chr1	209937687	209937724	(39018698)	+	(CAAAA)n	Simple_repeat	1	38	(0)	310410
25	10.7	3.9	1.9	chr1	209937987	209938038	(39018384)	+	(GGTGG)n	Simple_repeat	1	54	(0)	310411
1100	17.7	1.5	0.0	chr1	210124032	210124223	(38832199)	+	MER58A	DNA/hAT-Charlie	27	221	(3)	310657
721	24.5	11.6	4.0	chr1	210124243	210124671	(38831751)	+	HAL1	LINE/L1	1113	1578	(929)	310655
797	26.6	8.3	4.8	chr1	210373543	210373878	(38582544)	C	LTR82A	LTR/ERVL	(58)	814	466	311067
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
274	30.2	4.5	8.9	chr1	210393685	210393942	(38562480)	C	MamSINE1	SINE/tRNA-RTE	(32)	258	13	311101
13	17.7	5.3	0.0	chr1	211613345	211613382	(37343040)	+	(TGAGAG)n	Simple_repeat	1	40	(0)	313045
1336	13.0	0.0	0.0	chr1	211613695	211613871	(37342551)	C	AluJb	SINE/Alu	(6)	306	130	313046
248	30.9	2.2	9.8	chr1	211735752	211735945	(37220477)	C	MIRc	SINE/MIR	(7)	261	83	313285
14966	11.4	3.4	5.2	chr1	211841349	211843811	(37112611)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	4	313489
45	2.4	0.0	0.0	chr1	211918048	211918090	(37038332)	+	(CA)n	Simple_repeat	1	43	(0)	313627
260	29.2	0.0	0.0	chr1	211918309	211918373	(37038049)	+	MIRc	SINE/MIR	61	125	(143)	313628
1186	27.1	13.3	3.0	chr1	214427519	214428304	(34528118)	C	L2a	LINE/L2	(0)	3426	2534	317669
245	15.7	0.0	5.6	chr1	215006671	215006724	(33949698)	+	L2a	LINE/L2	3376	3426	(0)	318518
238	36.7	0.0	1.1	chr1	216580615	216580705	(32375717)	+	Plat_L3	LINE/CR1	3490	3579	(7)	320524
2187	12.6	4.1	0.6	chr1	217004239	217004589	(31951833)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	321101
639	23.9	8.6	7.2	chr1	217004893	217005225	(31951197)	C	Charlie19a	DNA/hAT-Charlie	(14)	372	35	321102
333	32.0	6.6	0.8	chr1	217275292	217275420	(31681002)	C	MIR3	SINE/MIR	(1)	207	71	321490
366	38.5	9.5	0.5	chr1	217275616	217275816	(31680606)	C	MIRb	SINE/MIR	(39)	229	9	321491
15	0.0	10.7	0.0	chr1	217471098	217471125	(31485297)	+	(ATATAA)n	Simple_repeat	1	31	(0)	321759
2242	20.0	8.5	17.9	chr1	217881427	217882280	(31074142)	C	LTR41	LTR/ERVL	(0)	768	3	322383
279	32.8	2.1	5.5	chr1	218479583	218479727	(30476695)	C	L3	LINE/CR1	(108)	3991	3852	323317
498	31.6	10.5	0.0	chr1	218660847	218661017	(30295405)	C	MamSINE1	SINE/tRNA-RTE	(23)	267	77	323594
247	29.3	0.0	0.0	chr1	218661152	218661209	(30295213)	+	MIRb	SINE/MIR	169	226	(42)	323595
17	8.8	0.0	0.0	chr1	218823463	218823486	(30132936)	+	(TC)n	Simple_repeat	1	24	(0)	323811
17	8.8	0.0	0.0	chr1	219299141	219299164	(29657258)	+	(T)n	Simple_repeat	1	24	(0)	324413
251	32.5	1.2	9.6	chr1	219770695	219770871	(29185551)	+	L2c	LINE/L2	3261	3422	(4)	325111
255	33.1	2.5	10.4	chr1	219798141	219798333	(29158089)	+	MER5A	DNA/hAT-Charlie	7	171	(7)	325162
22	11.6	4.1	2.1	chr1	220067127	220067175	(28889247)	+	A-rich	Low_complexity	1	50	(0)	325598
223	17.8	4.2	0.0	chr1	220067178	220067222	(28889200)	+	MER5B	DNA/hAT-Charlie	131	177	(1)	325599
210	34.9	0.0	0.0	chr1	220067589	220067651	(28888771)	C	MamSINE1	SINE/tRNA-RTE	(224)	66	4	325600
420	29.7	6.0	1.9	chr1	220198347	220198507	(28757915)	C	HAL1M8	LINE/L1	(38)	2953	2786	325853
381	23.5	8.3	1.8	chr1	220198591	220198759	(28757663)	C	HAL1M8	LINE/L1	(303)	2204	2024	325853
693	32.5	2.9	1.0	chr1	220198868	220199141	(28757281)	C	L2a	LINE/L2	(256)	3170	2887	325849
410	21.8	4.3	7.0	chr1	220301236	220301378	(28655044)	C	L1MC4	LINE/L1	(0)	8042	7904	326004
13	34.4	0.0	1.5	chr1	221039591	221039657	(27916765)	+	(AATAGCC)n	Simple_repeat	1	67	(0)	327072
296	31.6	1.0	1.0	chr1	221039755	221039850	(27916572)	+	MamSINE1	SINE/tRNA-RTE	117	212	(78)	327073
281	36.1	8.7	0.8	chr1	221085280	221085522	(27870900)	+	L2	LINE/L2	1869	2132	(1287)	327138
182	32.4	2.7	0.0	chr1	221336727	221336797	(27619625)	+	MIR1_Amn	SINE/MIR	123	195	(35)	327519
1208	21.2	4.3	0.6	chr1	221437525	221437856	(27518566)	+	L1MD2	LINE/L1	5020	5364	(782)	327631
858	11.8	41.8	0.0	chr1	221437876	221438093	(27518329)	C	Tigger7	DNA/TcMar-Tigger	(8)	2483	2174	327632
1605	17.8	3.6	0.0	chr1	221438084	221438353	(27518069)	C	Tigger7	DNA/TcMar-Tigger	(2211)	280	1	327633
14	8.1	3.9	0.0	chr1	221742866	221742891	(27213531)	+	(CGCC)n	Simple_repeat	1	27	(0)	328101
54	0.0	2.0	0.0	chr1	221810215	221810264	(27146158)	+	(AC)n	Simple_repeat	1	51	(0)	328224
2406	18.4	4.9	6.0	chr1	221962160	221962675	(26993747)	C	LTR54	LTR/ERV1	(0)	510	1	328437
1020	19.2	3.2	6.8	chr1	222465900	222466195	(26490227)	+	MER33	DNA/hAT-Charlie	17	301	(23)	329168
14	15.5	2.6	2.6	chr1	222712506	222712543	(26243879)	+	(CCGCC)n	Simple_repeat	1	39	(0)	329541
384	36.3	4.2	3.2	chr1	222820998	222821185	(26135237)	C	L3	LINE/CR1	(2555)	1544	1355	329742
1818	13.5	5.0	7.2	chr1	222821421	222821593	(26134829)	+	THE1D	LTR/ERVL-MaLR	1	177	(204)	329743
2594	19.7	7.1	0.8	chr1	222892052	222892649	(26063773)	C	MER99	DNA/hAT?	(1)	830	193	329863
2322	10.2	0.3	1.0	chr1	223698676	223698989	(25257433)	+	AluSx1	SINE/Alu	1	312	(0)	331053
384	30.1	7.0	1.8	chr1	223700748	223700929	(25255493)	C	L2b	LINE/L2	(5)	3382	3200	331057
3965	7.5	1.1	3.5	chr1	223732186	223732753	(25223669)	C	MER41A	LTR/ERV1	(0)	554	1	331128
2722	16.7	2.9	5.4	chr1	223732754	223733021	(25223401)	C	LTR75_1	LTR/ERV1	(264)	282	4	331127
184	29.5	4.7	11.6	chr1	224498025	224498162	(24458260)	C	MamTip2	DNA/hAT-Tip100	(177)	128	1	332669
229	33.3	1.2	1.2	chr1	224542758	224542842	(24413580)	+	L2b	LINE/L2	2751	2835	(584)	332758
1369	27.4	5.9	10.2	chr1	224542843	224543606	(24412816)	+	MER21C	LTR/ERVL	3	821	(117)	332759
2113	6.3	0.8	3.0	chr1	224861664	224861932	(24094490)	C	AluY	SINE/Alu	(16)	295	33	333267
1793	16.2	0.3	0.3	chr1	225662547	225662836	(23293586)	+	AluJb	SINE/Alu	11	300	(12)	334327
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
1006	27.5	8.6	4.0	chr1	227043781	227044377	(21912045)	C	L1M5	LINE/L1	(460)	5734	5101	336844
13	16.1	4.4	4.3	chr1	227313983	227314027	(21642395)	+	(ATATT)n	Simple_repeat	1	47	(0)	337278
4222	14.2	0.8	0.0	chr1	228417414	228418041	(20538381)	C	MER41B	LTR/ERV1	(0)	634	2	338677
294	32.8	4.7	0.0	chr1	228418094	228418215	(20538207)	C	MER34	LTR/ERV1	(317)	225	98	338678
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
324	25.6	18.5	0.6	chr1	230091569	230091741	(18864681)	+	LTR50	LTR/ERVL	9	219	(576)	341401
695	25.4	14.3	0.0	chr1	230091825	230092076	(18864346)	+	LTR50	LTR/ERVL	502	795	(0)	341401
1040	18.3	31.0	2.2	chr1	231395301	231395626	(17560796)	C	MER119	DNA/hAT-Charlie	(4)	579	160	343424
553	18.2	0.9	0.9	chr1	231395748	231395866	(17560556)	+	MER5A1	DNA/hAT-Charlie	17	135	(31)	343425
454	35.0	10.7	5.8	chr1	231395900	231396246	(17560176)	+	L2	LINE/L2	1886	2268	(1151)	343421
733	22.3	9.3	1.8	chr1	231527809	231528027	(17428395)	C	MIR	SINE/MIR	(1)	261	25	343647
759	33.4	8.6	3.8	chr1	234543600	234543966	(14412456)	+	X6B_LINE	LINE/CR1	682	1067	(5)	348050
187	25.9	3.6	3.6	chr1	234611624	234611679	(14344743)	+	L2	LINE/L2	1268	1323	(2096)	348170
20	12.4	2.9	0.0	chr1	234618743	234618777	(14337645)	+	(AC)n	Simple_repeat	1	36	(0)	348178
334	30.1	4.3	2.2	chr1	234657326	234657461	(14298961)	+	MIR3	SINE/MIR	5	143	(65)	348240
12	14.4	0.0	0.0	chr1	234724911	234724934	(14231488)	+	(GAGG)n	Simple_repeat	1	24	(0)	348336
563	28.0	10.4	0.8	chr1	235048012	235048188	(13908234)	+	LTR78	LTR/ERV1	1103	1303	(1)	348908
2238	12.3	0.0	1.0	chr1	235048523	235048832	(13907590)	+	AluSz6	SINE/Alu	2	308	(4)	348910
2680	14.5	11.3	3.9	chr1	235589033	235589593	(13366829)	+	LTR18B	LTR/ERVL	1	608	(6)	350050
526	24.2	5.6	2.1	chr1	235911101	235911284	(13045138)	+	MIRb	SINE/MIR	23	220	(42)	350608
263	32.1	18.2	0.5	chr1	235917096	235917289	(13039133)	C	MIRb	SINE/MIR	(14)	254	19	350630
469	26.8	2.1	4.7	chr1	235917302	235917450	(13038972)	C	MIRb	SINE/MIR	(109)	159	15	350631
880	14.1	0.0	0.7	chr1	235999758	235999893	(12956529)	+	MER4B	LTR/ERV1	1	135	(475)	350790
18	37.5	1.2	0.0	chr1	238318998	238319080	(10637342)	+	(AT)n	Simple_repeat	1	84	(0)	354523
1128	30.6	7.3	1.9	chr1	238652458	238652553	(10303869)	+	L1ME3	LINE/L1	6392	6490	(747)	354997
1101	30.0	9.4	2.6	chr1	238652573	238653305	(10303117)	+	L1ME3	LINE/L1	6464	7251	(2)	354997
589	33.5	6.8	4.0	chr1	238955721	238956090	(10000332)	C	L1MEc	LINE/L1	(5983)	417	37	355415
268	26.0	4.9	4.2	chr1	238956302	238956478	(9999944)	C	MLT1H	LTR/ERVL-MaLR	(0)	595	420	355416
1947	14.2	1.9	1.6	chr1	239565904	239566212	(9390210)	C	AluJo	SINE/Alu	(2)	310	1	356329
647	26.1	13.4	7.0	chr1	239742227	239742694	(9213728)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	1	356575
242	32.4	5.9	1.8	chr1	239743285	239743397	(9213025)	+	L2c	LINE/L2	3260	3377	(10)	356576
594	33.3	7.6	8.9	chr1	239946995	239947476	(9008946)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	30	356901
289	25.0	11.1	12.3	chr1	239947600	239947754	(9008668)	C	MLT1J	LTR/ERVL-MaLR	(2)	442	290	356902
411	26.5	8.0	3.0	chr1	239947766	239947970	(9008452)	C	MLT1J	LTR/ERVL-MaLR	(238)	274	1	356902
296	34.2	11.1	0.0	chr1	240107166	240107326	(8849096)	+	L3	LINE/CR1	3913	4093	(6)	357160
4173	8.5	0.6	1.6	chr1	240111254	240111813	(8844609)	C	MER41A	LTR/ERV1	(0)	554	1	357166
466	26.4	10.5	4.4	chr1	240111814	240111835	(8844587)	C	MIR	SINE/MIR	(198)	64	43	357165
29	6.3	6.0	0.0	chr1	240194027	240194076	(8762346)	+	(TTTTTG)n	Simple_repeat	1	53	(0)	357301
654	28.2	3.1	4.6	chr1	240194257	240194338	(8762084)	+	MIR	SINE/MIR	6	89	(173)	357302
2781	17.7	3.1	0.2	chr1	240194339	240194865	(8761557)	C	MER67A	LTR/ERV1	(0)	543	1	357303
16	29.9	1.7	1.7	chr1	240385844	240385902	(8570520)	+	(AT)n	Simple_repeat	1	60	(0)	357555
1884	22.3	10.6	7.4	chr1	240738930	240739385	(8217037)	+	Kanga1a	DNA/TcMar-Tc2	301	754	(0)	358187
14	27.3	0.0	0.0	chr1	241640678	241640718	(7315704)	+	(CATT)n	Simple_repeat	1	41	(0)	359587
12	23.0	0.0	4.5	chr1	243270258	243270301	(5686121)	+	(GTGAAT)n	Simple_repeat	1	44	(0)	362328
2573	25.4	6.6	2.9	chr1	243596148	243597236	(5359186)	+	L1ME1	LINE/L1	5224	6352	(0)	362788
2157	8.1	0.7	7.5	chr1	243718452	243718772	(5237650)	C	AluSc8	SINE/Alu	(12)	299	1	362964
1705	15.8	0.7	0.7	chr1	244103932	244104216	(4852206)	+	7SLRNA	srpRNA	21	305	(15)	363598
17	14.8	2.4	4.8	chr1	244104221	244104261	(4852161)	+	(AT)n	Simple_repeat	1	42	(0)	363599
738	28.0	10.6	2.7	chr1	244104308	244104796	(4851626)	+	L2a	LINE/L2	2886	3423	(3)	363600
2390	11.2	0.6	1.0	chr1	244113139	244113450	(4842972)	C	AluSx1	SINE/Alu	(0)	312	2	363608
4539	12.0	1.4	0.3	chr1	244157633	244158259	(4798163)	C	MER41B	LTR/ERV1	(0)	634	1	363669
2448	11.3	0.0	0.0	chr1	244158585	244158894	(4797528)	C	AluSx1	SINE/Alu	(2)	310	1	363670
14	18.3	2.7	0.0	chr1	244167704	244167740	(4788682)	+	(TTAGA)n	Simple_repeat	1	38	(0)	363677
2326	9.7	0.0	0.3	chr1	244168373	244168672	(4787750)	C	AluSx3	SINE/Alu	(12)	299	1	363678
201	33.3	7.4	1.4	chr1	244214224	244214363	(4742059)	C	MamRTE1	LINE/RTE-BovB	(3533)	279	131	363748
544	27.0	6.9	3.0	chr1	244214857	244215043	(4741379)	+	MIRb	SINE/MIR	1	208	(60)	363752
2342	16.6	1.9	2.1	chr1	244215044	244215113	(4741309)	C	MSTB	LTR/ERVL-MaLR	(1)	425	360	363753
2379	10.0	0.3	0.0	chr1	244215114	244215422	(4741000)	+	AluSx3	SINE/Alu	2	311	(0)	363754
2342	16.6	1.9	2.1	chr1	244215423	244215777	(4740645)	C	MSTB	LTR/ERVL-MaLR	(67)	359	1	363753
379	28.3	15.7	0.5	chr1	244239250	244239448	(4716974)	C	MIRb	SINE/MIR	(8)	260	26	363796
16	13.7	0.0	0.0	chr1	244239509	244239533	(4716889)	+	(GT)n	Simple_repeat	1	25	(0)	363797
27	6.1	0.0	0.0	chr1	244239533	244239567	(4716855)	+	(GA)n	Simple_repeat	1	35	(0)	363798
320	32.8	11.0	4.1	chr1	244239644	244239913	(4716509)	C	MamRTE1	LINE/RTE-BovB	(137)	3675	3385	363799
1214	26.5	6.7	5.3	chr1	244349073	244349467	(4606955)	C	LTR16	LTR/ERVL	(1)	437	37	364031
808	24.4	4.2	0.5	chr1	244349509	244349714	(4606708)	C	L1MC4	LINE/L1	(362)	7680	7467	364032
362	22.4	0.0	2.3	chr1	244652273	244652359	(4304063)	+	L2a	LINE/L2	3339	3423	(3)	364505
3982	9.6	3.0	1.1	chr1	244735453	244736010	(4220412)	+	MER61E	LTR/ERV1	1	569	(0)	364644
2701	23.2	10.1	5.0	chr1	245770034	245771041	(3185381)	+	L1MEg	LINE/L1	50	1203	(5022)	366504
1910	15.5	0.0	1.4	chr1	246004853	246005148	(2951274)	C	AluJb	SINE/Alu	(20)	292	1	366810
392	28.5	11.6	0.0	chr1	246005366	246005495	(2950927)	+	MIRc	SINE/MIR	18	164	(104)	366811
13	33.4	0.0	0.0	chr1	246139609	246139664	(2816758)	+	A-rich	Low_complexity	1	56	(0)	367006
344	32.6	9.4	1.4	chr1	246139742	246139887	(2816535)	C	Tigger19a	DNA/TcMar-Tigger	(128)	195	37	367007
237	21.0	0.0	3.1	chr1	246632921	246632984	(2323438)	C	UCON12	Unknown	(441)	79	18	367820
2194	19.4	6.4	13.9	chr1	247367537	247367831	(1588591)	C	LTR49-int	LTR/ERV1	(5852)	479	204	369022
1608	16.7	1.9	2.2	chr1	247367833	247367906	(1588516)	+	AluJb	SINE/Alu	1	74	(238)	369034
4117	13.4	1.1	1.3	chr1	247367907	247368541	(1587881)	+	MER41B	LTR/ERV1	1	634	(0)	369035
251	23.1	16.5	0.0	chr1	248809920	248810010	(146412)	+	MER53	DNA/hAT	44	152	(41)	370836
13	13.9	2.9	2.9	chr1	248810504	248810537	(145885)	+	(ACAC)n	Simple_repeat	1	35	(0)	370837
218	21.7	4.8	4.8	chr1	248858380	248858442	(97980)	+	MIR3	SINE/MIR	104	166	(42)	370896
257	26.4	12.0	6.0	chr10	4771608	4771724	(129025698)	C	Arthur1B	DNA/hAT-Tip100	(1100)	125	1	376910
313	29.3	11.4	0.8	chr10	6239249	6239365	(127558057)	C	MIRb	SINE/MIR	(96)	172	42	379157
1405	9.5	5.0	0.0	chr10	6275626	6275814	(127521608)	C	AluSx	SINE/Alu	(15)	297	99	379229
288	34.5	3.2	0.0	chr10	13712648	13712766	(120084656)	+	MIR3	SINE/MIR	32	154	(54)	391229
192	29.9	7.4	1.1	chr10	13713047	13713134	(120084288)	+	MIR1_Amn	SINE/MIR	3	96	(134)	391230
1677	18.1	0.3	3.3	chr10	15200345	15200647	(118596775)	+	AluJr	SINE/Alu	1	294	(18)	393826
4147	10.3	1.9	4.6	chr10	15627751	15628324	(118169098)	+	MER41B	LTR/ERV1	1	570	(64)	394578
472	25.5	10.1	2.4	chr10	16891767	16891931	(116905491)	+	MER20	DNA/hAT-Charlie	1	179	(40)	396533
18	22.6	3.3	3.2	chr10	16892462	16892506	(116904916)	+	(AT)n	Simple_repeat	1	47	(0)	396534
1917	15.1	1.4	0.7	chr10	16892507	16892791	(116904631)	C	AluJb	SINE/Alu	(23)	289	3	396535
1535	20.3	13.5	1.4	chr10	17563576	17564010	(116233412)	+	LTR54B	LTR/ERV1	1	496	(2)	397642
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
851	15.3	0.7	3.5	chr10	27241586	27241729	(106555693)	+	FLAM_C	SINE/Alu	1	140	(3)	413146
13	26.7	0.0	2.1	chr10	31944639	31944685	(101852737)	+	(ATTAA)n	Simple_repeat	1	47	(0)	421029
523	22.2	10.7	6.3	chr10	32983299	32983582	(100813840)	+	MLT1L	LTR/ERVL-MaLR	2	299	(311)	422575
199	29.1	1.8	0.0	chr10	43862583	43862637	(89934785)	+	MIR3	SINE/MIR	143	198	(10)	434206
21	10.8	0.0	0.0	chr10	58157351	58157381	(75640041)	+	(TA)n	Simple_repeat	1	31	(0)	453717
264	34.5	2.0	2.6	chr10	58157907	58158058	(75639364)	C	MER5A	DNA/hAT-Charlie	(3)	186	36	453718
374	21.0	1.2	0.0	chr10	59079245	59079325	(74718097)	+	MER5A1	DNA/hAT-Charlie	82	163	(3)	455035
529	31.2	1.0	4.6	chr10	60643881	60644098	(73153324)	+	MLT1K	LTR/ERVL-MaLR	384	593	(2)	457361
40	2.6	0.0	0.0	chr10	61993121	61993159	(71804263)	+	(AC)n	Simple_repeat	1	39	(0)	459396
363	24.3	5.6	5.0	chr10	68153346	68153505	(65643917)	+	Charlie19a	DNA/hAT-Charlie	184	344	(42)	468618
736	15.3	11.0	2.7	chr10	72170472	72170621	(61626801)	+	AluJo	SINE/Alu	147	310	(2)	476663
634	23.2	6.8	4.3	chr10	72170625	72170809	(61626613)	+	L1MC4a	LINE/L1	7580	7769	(273)	476659
533	22.7	7.0	0.0	chr10	72170842	72170963	(61626459)	+	FLAM_C	SINE/Alu	2	221	(81)	476664
295	33.7	4.8	0.0	chr10	72170877	72170974	(61626448)	C	SVA_E	Retroposon/SVA	(1071)	311	209	476665
472	23.7	13.9	0.5	chr10	72170975	72171161	(61626261)	+	L1MC4a	LINE/L1	7817	8032	(10)	476659
2204	10.3	3.3	0.0	chr10	72171425	72171716	(61625706)	C	AluSx1	SINE/Alu	(10)	302	1	476667
1587	18.9	21.2	1.0	chr10	72171717	72171855	(61625567)	C	MLT1D	LTR/ERVL-MaLR	(316)	189	1	476666
397	27.2	5.5	0.0	chr10	72171888	72172028	(61625394)	+	L1ME3B	LINE/L1	5961	6082	(161)	476668
493	29.5	13.4	0.5	chr10	72175114	72175321	(61622101)	+	MIRb	SINE/MIR	22	260	(8)	476674
3521	17.0	2.8	7.0	chr10	73742860	73743582	(60053840)	C	LTR8	LTR/ERV1	(0)	691	1	479874
273	25.6	3.5	4.7	chr10	73743583	73743617	(60053805)	+	L2a	LINE/L2	3392	3426	(0)	479873
2007	10.9	6.6	0.3	chr10	73966643	73966925	(59830497)	+	AluSx1	SINE/Alu	1	302	(10)	480277
3889	13.4	3.1	2.1	chr10	74179295	74179921	(59617501)	+	MER41B	LTR/ERV1	1	634	(0)	480714
1619	15.1	5.8	1.4	chr10	75209409	75209569	(58587853)	C	AluJb	SINE/Alu	(20)	292	135	482669
27	0.0	0.0	0.0	chr10	75209570	75209595	(58587827)	+	(T)n	Simple_repeat	1	26	(0)	482670
1619	15.1	5.8	1.4	chr10	75209596	75209712	(58587710)	C	AluJb	SINE/Alu	(178)	134	1	482669
1953	16.7	15.5	2.5	chr10	75209713	75209895	(58587527)	C	LTR54	LTR/ERV1	(331)	179	1	482668
450	31.0	2.7	0.0	chr10	77112657	77112798	(56684624)	C	L1MC5a	LINE/L1	(7)	2770	2625	485357
271	29.6	10.9	2.8	chr10	77160550	77160729	(56636693)	+	MIRc	SINE/MIR	17	224	(44)	485446
200	23.1	1.9	0.0	chr10	77297557	77297608	(56499814)	+	MIRc	SINE/MIR	194	246	(22)	485662
433	21.4	1.2	0.0	chr10	77300927	77301010	(56496412)	C	MER5B	DNA/hAT-Charlie	(74)	104	20	485667
354	21.3	2.1	2.1	chr10	77350971	77351066	(56446356)	+	Charlie15a	DNA/hAT-Charlie	127	222	(2)	485763
942	25.2	6.5	11.1	chr10	77722608	77722849	(56074573)	+	L1MEg	LINE/L1	1262	1510	(4732)	486479
4363	8.2	3.8	0.8	chr10	77722850	77723436	(56073986)	C	LTR14B	LTR/ERVK	(0)	608	4	486485
942	25.2	6.5	11.1	chr10	77723437	77723454	(56073968)	+	L1MEg	LINE/L1	1511	1517	(4725)	486479
378	33.6	6.5	6.2	chr10	78588552	78588856	(55208566)	C	L2c	LINE/L2	(0)	3387	3082	488090
723	32.3	8.3	2.2	chr10	78588920	78589676	(55207746)	C	L1M5	LINE/L1	(536)	5658	4858	488091
524	27.9	8.7	6.3	chr10	78621262	78621452	(55175970)	C	MIRb	SINE/MIR	(72)	196	1	488153
1522	21.8	7.8	4.2	chr10	87704990	87705721	(46091701)	C	L1ME2z	LINE/L1	(288)	6156	5309	501696
2503	9.0	0.0	0.0	chr10	87705722	87706031	(46091391)	C	AluSx4	SINE/Alu	(0)	310	1	501697
304	34.0	9.7	0.1	chr10	87843244	87843425	(45953997)	+	LTR88b	LTR/Gypsy?	29	217	(620)	501900
13	25.5	0.0	0.0	chr10	87843689	87843725	(45953697)	+	(ATT)n	Simple_repeat	1	37	(0)	501901
1343	20.2	1.6	0.8	chr10	88207094	88207574	(45589848)	+	L1MC	LINE/L1	5055	5539	(640)	502507
380	25.3	18.0	0.7	chr10	89278416	89278562	(44518860)	C	MIR	SINE/MIR	(7)	255	78	504143
202	36.2	3.3	1.7	chr10	89282030	89282147	(44515275)	C	MIR3	SINE/MIR	(41)	167	48	504148
236	32.8	6.4	2.2	chr10	89282168	89282301	(44515121)	C	MIR3	SINE/MIR	(9)	199	60	504149
243	32.7	7.4	3.0	chr10	89553084	89553250	(44244172)	C	Mam_R4	LINE/Dong-R4	(274)	3535	3361	504563
205	26.7	5.1	3.9	chr10	89553559	89553636	(44243786)	+	MIR3	SINE/MIR	82	160	(48)	504564
2331	16.9	6.0	0.2	chr10	93437918	93438368	(40359054)	+	MER31A	LTR/ERV1	1	479	(6)	511107
498	26.4	6.6	7.8	chr10	96090395	96090605	(37706817)	C	MIRb	SINE/MIR	(28)	240	37	515390
913	22.6	2.5	4.4	chr10	99994122	99994371	(33803051)	+	MIR	SINE/MIR	10	254	(8)	522480
12	19.4	5.9	3.7	chr10	100891056	100891106	(32906316)	+	GA-rich	Low_complexity	1	54	(0)	524127
471	27.7	7.3	4.8	chr10	101358646	101358889	(32438533)	C	MLT1G1	LTR/ERVL-MaLR	(237)	342	35	524960
335	31.6	6.2	0.0	chr10	103844729	103844864	(29952558)	+	MIRb	SINE/MIR	116	260	(8)	529756
4244	7.2	0.2	5.8	chr10	103844866	103845041	(29952381)	+	MER41A	LTR/ERV1	1	170	(384)	529757
2274	11.0	0.0	2.2	chr10	103845042	103845358	(29952064)	+	AluSx	SINE/Alu	1	310	(2)	529758
378	28.8	10.7	4.1	chr10	104269710	104269929	(29527493)	C	MIRb	SINE/MIR	(0)	268	34	530441
30	0.0	0.0	0.0	chr10	119253848	119253873	(14543549)	+	(GT)n	Simple_repeat	1	26	(0)	553558
407	30.6	0.0	0.8	chr10	119254165	119254289	(14543133)	C	MIR3	SINE/MIR	(7)	201	78	553559
303	27.7	12.8	4.4	chr10	120428896	120429031	(13368391)	C	MER5A	DNA/hAT-Charlie	(36)	153	5	555640
572	10.6	0.0	0.0	chr11	355601	355685	(134730937)	C	MER41A	LTR/ERV1	(463)	91	7	573319
255	28.7	6.3	1.4	chr11	355690	355901	(134730721)	C	LTR40b	LTR/ERVL	(37)	425	203	573320
13	18.7	0.0	3.0	chr11	2951774	2951806	(132134816)	+	(TCT)n	Simple_repeat	1	33	(0)	576350
3746	10.5	0.4	0.4	chr11	5367228	5367773	(129718849)	C	MER41A	LTR/ERV1	(8)	546	1	579913
655	33.2	2.2	0.0	chr11	5368248	5368470	(129718152)	+	MIR	SINE/MIR	35	262	(0)	579914
309	0.0	0.0	0.0	chr11	9566557	9566592	(125520030)	+	MER11C	LTR/ERVK	1	36	(1035)	586093
2731	11.6	2.7	3.6	chr11	9774018	9774366	(125312256)	C	MER65A	LTR/ERV1	(60)	385	40	586525
27	0.0	2.9	2.9	chr11	9774367	9774400	(125312222)	+	(TTTTG)n	Simple_repeat	1	35	(0)	586529
2731	11.6	2.7	3.6	chr11	9774401	9774440	(125312182)	C	MER65A	LTR/ERV1	(406)	39	1	586525
1616	24.5	4.6	0.3	chr11	9774442	9774797	(125311825)	+	LTR16B2	LTR/ERVL	3	374	(88)	586530
758	12.3	13.9	0.0	chr11	9774873	9775002	(125311620)	+	MER5A1	DNA/hAT-Charlie	16	166	(0)	586531
328	11.1	0.0	0.0	chr11	10395109	10395153	(124691469)	C	MLT2C1	LTR/ERVL	(2)	560	516	587497
12	13.9	0.0	0.0	chr11	10395188	10395211	(124691411)	+	(TACA)n	Simple_repeat	1	24	(0)	587498
15	33.6	0.0	0.0	chr11	10395218	10395261	(124691361)	+	GA-rich	Low_complexity	1	44	(0)	587499
1705	17.6	4.6	1.2	chr11	10395262	10395595	(124691027)	C	MLT2C1	LTR/ERVL	(48)	349	4	587497
2485	15.2	1.0	2.8	chr11	10887342	10887472	(124199150)	C	L1M4	LINE/L1	(3244)	2902	2776	588315
2033	13.5	13.3	3.2	chr11	10887473	10887782	(124198840)	+	LTR47A	LTR/ERVL	1	360	(92)	588316
337	33.5	11.1	1.8	chr11	10907738	10908065	(124178557)	C	L2c	LINE/L2	(580)	2839	2478	588353
2326	16.8	4.1	2.2	chr11	10908371	10908479	(124178143)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	364	588356
2439	9.5	0.0	1.3	chr11	12164853	12165168	(122921454)	+	AluSz	SINE/Alu	1	312	(0)	590351
349	26.4	0.0	4.4	chr11	23124475	23124565	(111962057)	C	L2a	LINE/L2	(0)	3426	3340	607925
384	33.7	9.3	0.4	chr11	23124562	23124761	(111961861)	C	MIRc	SINE/MIR	(3)	259	48	607926
568	31.0	4.7	2.1	chr11	26231580	26231824	(108854798)	+	MIR	SINE/MIR	14	261	(1)	612150
3562	12.5	3.2	0.0	chr11	27932590	27933125	(107153497)	C	MER41A	LTR/ERV1	(0)	554	1	614798
227	32.5	1.3	1.3	chr11	27933191	27933268	(107153354)	C	MER5B	DNA/hAT-Charlie	(37)	141	64	614799
207	27.4	0.0	7.6	chr11	27933275	27933353	(107153269)	+	L2a	LINE/L2	3315	3426	(0)	614800
17	11.2	3.5	0.0	chr11	27934675	27934703	(107151919)	+	(CT)n	Simple_repeat	1	30	(0)	614802
681	25.6	12.1	4.5	chr11	34302000	34302358	(100784264)	C	L1ME4a	LINE/L1	(12)	6112	5723	625013
314	32.0	6.1	1.9	chr11	59811178	59811333	(75275289)	C	MIRb	SINE/MIR	(69)	199	37	657477
218	31.4	5.5	7.1	chr11	61792007	61792276	(73294346)	C	L2c	LINE/L2	(18)	3369	3084	660847
3480	17.1	1.7	7.2	chr11	62428724	62429455	(72657167)	C	LTR8	LTR/ERV1	(0)	691	1	662056
1688	10.6	5.9	13.9	chr11	62429522	62429852	(72656770)	+	AluSx	SINE/Alu	1	303	(9)	662057
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
8930	1.6	0.0	0.0	chr11	63530314	63531281	(71555341)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	663822
1967	17.5	9.9	5.2	chr11	63531292	63531754	(71554868)	C	MER66C	LTR/ERV1	(67)	488	2	663823
931	13.4	0.0	0.0	chr11	64270649	64270782	(70815840)	+	FRAM	SINE/Alu	1	134	(42)	665282
450	30.8	13.7	5.0	chr11	65428988	65429477	(69657145)	C	L1ME4a	LINE/L1	(251)	5873	5367	667515
505	31.0	12.1	3.3	chr11	65429593	65429862	(69656760)	C	L1ME4a	LINE/L1	(891)	5255	4959	667515
339	26.9	7.7	1.2	chr11	65430028	65430148	(69656474)	+	MIRb	SINE/MIR	31	156	(112)	667517
4082	19.3	1.6	1.7	chr11	65438391	65439384	(69647238)	C	L1MB7	LINE/L1	(41)	6143	5153	667530
204	27.9	1.9	2.8	chr11	65444391	65444497	(69642125)	+	MIR1_Amn	SINE/MIR	66	171	(59)	667540
48	0.0	0.0	0.0	chr11	65472426	65472466	(69614156)	+	(GT)n	Simple_repeat	1	41	(0)	667604
390	15.0	0.0	0.0	chr11	65477747	65477806	(69608816)	+	AluJo	SINE/Alu	74	133	(179)	667619
21	9.5	8.5	2.0	chr11	65477807	65477853	(69608769)	+	(AC)n	Simple_repeat	1	51	(0)	667620
2315	9.1	0.0	2.2	chr11	65478063	65478381	(69608241)	+	AluSz	SINE/Alu	1	312	(0)	667621
13	20.3	0.0	4.7	chr11	65502503	65502545	(69584077)	+	A-rich	Low_complexity	1	43	(0)	667665
2340	7.8	0.7	0.0	chr11	65508761	65509054	(69577568)	C	AluSc	SINE/Alu	(13)	296	1	667670
2085	11.4	0.4	0.0	chr11	65509130	65509463	(69577159)	C	AluSz	SINE/Alu	(0)	312	1	667671
182	35.1	6.8	3.8	chr11	66119755	66119911	(68966711)	+	MIR3	SINE/MIR	23	184	(24)	668867
337	30.4	7.7	1.5	chr11	66119911	66120099	(68966523)	+	MIRb	SINE/MIR	16	221	(47)	668868
1661	9.6	17.3	0.4	chr11	66120147	66120396	(68966226)	C	AluSz	SINE/Alu	(11)	301	1	668869
336	21.6	1.3	1.3	chr11	67563418	67563492	(67523130)	+	LTR49-int	LTR/ERV1	1121	1195	(5136)	671889
351	17.9	0.0	0.0	chr11	67563501	67563567	(67523055)	+	tRNA-Glu-GAA	tRNA	9	75	(0)	671890
839	24.5	8.5	4.8	chr11	67563568	67563790	(67522832)	+	LTR49-int	LTR/ERV1	1015	1176	(7868)	671889
4033	6.0	4.5	0.0	chr11	67563791	67564319	(67522303)	+	MER41A	LTR/ERV1	1	554	(0)	671891
1441	20.0	12.6	5.9	chr11	68011104	68011560	(67075062)	C	LTR54B	LTR/ERV1	(4)	494	3	672617
219	34.9	8.8	6.0	chr11	72042253	72042597	(63044025)	C	L2a	LINE/L2	(6)	3420	3021	679201
918	26.5	2.8	1.4	chr11	72236311	72236593	(62850029)	C	MER103C	DNA/hAT-Charlie	(5)	292	6	679591
343	22.0	9.8	9.3	chr11	73322336	73322521	(61764101)	C	MIR3	SINE/MIR	(9)	199	9	681627
3983	7.7	0.2	0.6	chr11	73528190	73528712	(61557910)	+	MER41C	LTR/ERV1	1	521	(0)	682039
645	19.5	3.1	1.6	chr11	74135137	74135261	(60951361)	+	MLT1E3	LTR/ERVL-MaLR	1	127	(497)	683498
1043	18.0	0.0	0.0	chr11	74135270	74135430	(60951192)	C	AluJb	SINE/Alu	(14)	298	138	683499
499	27.4	14.3	0.0	chr11	74135433	74135611	(60951011)	+	MLT1E3	LTR/ERVL-MaLR	88	296	(331)	683498
543	27.2	3.2	7.2	chr11	82900866	82901127	(52185495)	C	MIRb	SINE/MIR	(3)	265	15	699672
12	16.2	7.0	2.2	chr11	82901319	82901361	(52185261)	+	(CCTC)n	Simple_repeat	1	46	(0)	699673
2110	18.1	5.1	2.2	chr11	84019515	84019967	(51066655)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	701629
281	28.1	13.2	5.9	chr11	84019968	84020205	(51066417)	+	LTR85c	LTR/Gypsy?	291	318	(505)	701628
310	29.3	8.5	12.8	chr11	86116742	86116976	(48969646)	+	MIRb	SINE/MIR	45	268	(0)	704950
252	30.5	7.1	0.0	chr11	86816227	86816331	(48270291)	C	L2b	LINE/L2	(2)	3373	3261	706162
3737	10.6	1.3	4.5	chr11	94700075	94700650	(40385972)	C	MER41D	LTR/ERV1	(0)	557	1	717541
1309	21.9	7.1	10.5	chr11	94700651	94700751	(40385871)	+	MLT1C	LTR/ERVL-MaLR	365	467	(0)	717540
1869	19.9	13.8	1.2	chr11	94700765	94701350	(40385272)	+	L1ME2z	LINE/L1	2633	3304	(2842)	717538
354	34.9	4.0	8.7	chr11	96278409	96278694	(38807928)	C	L2c	LINE/L2	(67)	3320	3049	719909
428	32.7	11.1	5.4	chr11	96278812	96279235	(38807387)	C	L2c	LINE/L2	(609)	2810	2360	719909
924	26.6	13.0	3.2	chr11	96330521	96330989	(38755633)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	3	719993
405	35.6	9.0	3.9	chr11	103515127	103515515	(31571107)	C	L1MEd	LINE/L1	(5713)	1390	980	729540
1209	10.5	1.2	0.0	chr11	103536733	103536894	(31549728)	+	AluSx	SINE/Alu	137	300	(12)	729590
803	10.3	0.0	0.0	chr11	103536905	103537021	(31549601)	C	MER73	LTR/ERVL	(527)	117	1	729589
1458	12.9	2.8	6.3	chr11	103624069	103624367	(31462255)	+	L1MA9	LINE/L1	6025	6312	(0)	729698
1968	14.2	3.0	0.7	chr11	103624483	103624777	(31461845)	+	AluSz	SINE/Alu	1	302	(10)	729699
2409	14.1	7.1	2.1	chr11	103649290	103649716	(31436906)	C	LTR47A	LTR/ERVL	(0)	452	3	729746
4777	15.1	4.5	1.5	chr11	103650659	103651569	(31435053)	+	L1PBa	LINE/L1	3	941	(5922)	729747
631	26.5	4.7	4.2	chr11	103651603	103651761	(31434861)	+	MIRc	SINE/MIR	6	165	(103)	729748
4527	13.4	8.4	0.3	chr11	103651762	103652512	(31434110)	+	LTR8B	LTR/ERV1	2	819	(1)	729749
13	12.5	0.0	9.5	chr11	103730571	103730612	(31356010)	+	(TTTAATT)n	Simple_repeat	1	42	(0)	729877
26	24.8	0.0	1.4	chr11	104306944	104307013	(30779609)	+	(TCTC)n	Simple_repeat	1	70	(0)	730668
419	34.1	10.2	2.9	chr11	110897323	110897666	(24188956)	+	L2c	LINE/L2	2925	3296	(91)	740519
268	25.1	7.7	1.8	chr11	110897692	110897844	(24188778)	C	Kanga1a	DNA/TcMar-Tc2	(0)	754	667	740524
11	21.5	2.5	2.4	chr11	110907757	110907796	(24178826)	+	(ATCCTC)n	Simple_repeat	1	41	(0)	740539
523	28.4	33.2	0.0	chr11	110908210	110908622	(24178000)	C	LTR16E2	LTR/ERVL	(0)	568	10	740540
29	0.0	0.0	0.0	chr11	111476136	111476160	(23610462)	+	(AC)n	Simple_repeat	1	25	(0)	741442
263	29.1	6.0	6.0	chr11	111476161	111476202	(23610420)	+	Helitron3Na_Mam	RC/Helitron	430	477	(9)	741440
14	19.3	2.3	2.3	chr11	111476417	111476459	(23610163)	+	(AATAA)n	Simple_repeat	1	44	(0)	741443
405	35.0	0.0	1.6	chr11	111819771	111819895	(23266727)	+	L2b	LINE/L2	3253	3375	(0)	742011
2428	6.2	0.0	2.8	chr11	112120843	112121131	(22965491)	+	AluYc	SINE/Alu	1	281	(18)	742581
3340	12.3	3.6	1.7	chr11	114294851	114295386	(20791236)	C	LTR35A	LTR/ERV1	(0)	547	1	746037
711	32.0	3.8	0.4	chr11	122189855	122190086	(12896536)	C	MIR	SINE/MIR	(10)	252	13	759217
342	34.4	3.6	1.9	chr11	122190086	122190250	(12896372)	C	MIRb	SINE/MIR	(75)	193	28	759218
4542	10.0	1.1	1.3	chr11	123260410	123261035	(11825587)	C	MER41B	LTR/ERV1	(9)	625	1	761195
343	32.2	4.0	0.8	chr11	123261068	123261189	(11825433)	C	MIRb	SINE/MIR	(115)	153	28	761196
252	27.6	1.2	3.4	chr11	123454135	123454225	(11632397)	+	MIRb	SINE/MIR	111	205	(63)	761581
472	30.9	6.1	4.4	chr11	128509761	128509987	(6576635)	+	MIRb	SINE/MIR	35	265	(3)	769005
32	3.2	0.0	0.0	chr11	130897374	130897405	(4189217)	+	(AC)n	Simple_repeat	1	32	(0)	772550
213	31.8	9.3	0.0	chr12	6335971	6336058	(126939251)	+	L3b	LINE/CR1	4950	5046	(186)	788500
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
63	0.0	1.8	0.0	chr12	6607672	6607728	(126667581)	+	(AC)n	Simple_repeat	1	58	(0)	789024
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
709	22.8	10.5	6.0	chr12	14948271	14948587	(118326722)	+	Arthur1	DNA/hAT-Tip100	3613	3945	(2)	802145
229	33.6	0.0	4.5	chr12	14952968	14953101	(118322208)	+	MIR3	SINE/MIR	19	146	(62)	802150
197	29.8	0.0	0.0	chr12	15726769	15726815	(117548494)	C	L2a	LINE/L2	(12)	3414	3368	803200
2118	24.5	1.5	0.8	chr12	18851163	18851680	(114423629)	+	L1ME1	LINE/L1	5658	6179	(0)	807155
1115	27.1	6.4	4.5	chr12	19431971	19432352	(113842957)	+	LTR88b	LTR/Gypsy?	1	390	(447)	808181
2140	15.9	1.8	1.0	chr12	25614724	25615110	(107660199)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	816727
241	39.5	10.8	0.9	chr12	25615203	25615427	(107659882)	+	L3b	LINE/CR1	4546	4795	(437)	816728
1929	14.8	0.3	3.8	chr12	25615444	25615760	(107659549)	C	AluSz	SINE/Alu	(6)	306	1	816729
4688	10.3	0.2	0.0	chr12	26456046	26456676	(106818633)	+	MER41B	LTR/ERV1	3	634	(0)	817994
1378	22.5	6.2	5.8	chr12	26649071	26649192	(106626117)	C	L1MC4	LINE/L1	(0)	8042	7901	818279
43	4.5	0.0	0.0	chr12	26649193	26649238	(106626071)	+	(CA)n	Simple_repeat	1	46	(0)	818280
1378	22.5	6.2	5.8	chr12	26649239	26649567	(106625742)	C	L1MC4	LINE/L1	(142)	7900	7590	818279
2741	12.9	2.1	0.0	chr12	28022933	28023351	(105251958)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	820490
2638	19.1	1.4	6.1	chr12	28023352	28023807	(105251502)	C	MLT1F2	LTR/ERVL-MaLR	(121)	439	7	820489
754	21.8	11.3	2.5	chr12	28130452	28130653	(105144656)	C	MIR	SINE/MIR	(11)	251	30	820652
234	38.2	4.0	2.0	chr12	28130826	28131020	(105144289)	+	OldhAT1	DNA/hAT-Ac	1188	1386	(1462)	820653
941	13.7	0.0	0.0	chr12	31496582	31496698	(101778611)	+	AluJo	SINE/Alu	1	117	(195)	825394
313	25.8	3.8	9.2	chr12	46357773	46357913	(86917396)	+	MER5A	DNA/hAT-Charlie	35	167	(22)	842149
228	19.5	8.3	4.9	chr12	46358060	46358140	(86917169)	C	L2c	LINE/L2	(3)	3384	3301	842150
11	22.1	3.9	3.8	chr12	46383051	46383101	(86892208)	+	(GCGGAG)n	Simple_repeat	1	53	(0)	842182
16	29.1	1.4	4.0	chr12	46383333	46383405	(86891904)	+	GA-rich	Low_complexity	1	74	(0)	842183
41	16.1	0.0	0.0	chr12	49222708	49222777	(84052532)	+	GA-rich	Low_complexity	1	70	(0)	846714
1916	17.9	0.3	0.6	chr12	49223100	49223411	(84051898)	+	AluJo	SINE/Alu	1	311	(1)	846715
2757	9.1	2.1	9.2	chr12	50186385	50186842	(83088467)	+	LTR47A2	LTR/ERVL	1	425	(7)	848609
2263	9.2	0.3	0.7	chr12	53390401	53390694	(79884615)	+	AluSx3	SINE/Alu	1	293	(18)	854648
730	24.6	10.8	0.5	chr12	62328261	62328460	(70946849)	C	MER58A	DNA/hAT-Charlie	(1)	223	1	867772
554	34.6	6.8	5.4	chr12	62328652	62329113	(70946196)	+	L1M5	LINE/L1	4614	5080	(1066)	867771
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
2165	10.2	0.0	1.4	chr12	62733273	62733556	(70541753)	C	AluSx3	SINE/Alu	(31)	280	1	868398
4214	12.6	0.0	0.2	chr12	65562000	65562626	(67712683)	+	MER41B	LTR/ERV1	1	626	(8)	872967
781	24.5	4.7	4.3	chr12	65642150	65642448	(67632861)	C	MLT1J	LTR/ERVL-MaLR	(211)	301	2	873103
461	30.6	9.7	1.1	chr12	65642544	65642731	(67632578)	C	L2c	LINE/L2	(556)	2863	2658	873101
3948	12.6	5.5	6.6	chr12	67766080	67766778	(65508531)	+	LTR8	LTR/ERV1	1	691	(0)	876394
893	16.4	1.9	0.6	chr12	68351935	68352093	(64923216)	+	MLT1A0	LTR/ERVL-MaLR	1	161	(204)	877220
670	14.3	1.9	0.9	chr12	68352094	68352199	(64923110)	+	MER41-int	LTR/ERV1	5840	5946	(0)	877221
3886	10.1	2.7	1.1	chr12	68352200	68352738	(64922571)	+	MER41B	LTR/ERV1	1	548	(86)	877221
330	26.0	8.2	9.6	chr12	69688773	69688959	(63586350)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	879740
25	6.3	0.0	0.0	chr12	69988011	69988043	(63287266)	+	(CA)n	Simple_repeat	1	33	(0)	880210
1120	15.2	0.6	0.0	chr12	71557141	71557298	(61718011)	+	AluJr	SINE/Alu	138	296	(16)	882494
2292	11.1	1.0	0.7	chr12	76023724	76024012	(57251297)	+	AluSx	SINE/Alu	1	290	(22)	888502
1975	16.0	1.7	0.0	chr12	76024131	76024418	(57250891)	+	AluSz	SINE/Alu	1	293	(19)	888503
44	27.0	0.9	0.9	chr12	76028170	76028283	(57247026)	+	(AT)n	Simple_repeat	1	115	(0)	888507
642	30.5	11.1	3.1	chr12	76182968	76183523	(57091786)	+	LTR78	LTR/ERV1	667	1304	(0)	888800
540	21.7	6.4	4.2	chr12	76183987	76184154	(57091155)	C	MER5B	DNA/hAT-Charlie	(2)	176	5	888801
11	20.5	2.9	0.0	chr12	77134025	77134058	(56141251)	+	(TTATTA)n	Simple_repeat	1	35	(0)	890423
316	21.8	1.3	2.5	chr12	78398904	78398983	(54876326)	+	L3	LINE/CR1	3764	3842	(257)	892094
12	26.1	1.9	3.6	chr12	78399049	78399102	(54876207)	+	(AATA)n	Simple_repeat	1	55	(0)	892095
233	30.4	2.8	0.0	chr12	78399204	78399272	(54876037)	+	Plat_L3	LINE/CR1	3514	3584	(2)	892096
2151	26.7	10.4	1.0	chr12	79844213	79845065	(53430244)	+	L2a	LINE/L2	2320	3248	(178)	894123
436	34.9	2.1	5.3	chr12	83313736	83313980	(49961329)	+	OldhAT1	DNA/hAT-Ac	1678	1914	(934)	898943
270	39.0	9.8	1.5	chr12	83954260	83954793	(49320516)	+	L2	LINE/L2	2283	2865	(554)	899693
189	34.9	3.5	3.5	chr12	84077650	84077762	(49197547)	C	L2	LINE/L2	(1071)	2348	2236	899836
300	24.7	1.3	1.3	chr12	84077960	84078037	(49197272)	C	LTR33	LTR/ERVL	(2)	513	436	899837
472	38.1	6.4	2.7	chr12	84078058	84078386	(49196923)	C	LTR33	LTR/ERVL	(130)	385	44	899837
3165	13.4	1.5	4.3	chr12	87439559	87440094	(45835215)	C	MER41C	LTR/ERV1	(0)	521	1	904224
3221	19.8	10.6	2.8	chr12	87440095	87440657	(45834652)	+	LTR8B	LTR/ERV1	237	813	(7)	904223
278	30.6	3.9	4.8	chr12	89390502	89390604	(43884705)	C	AmnSINE1	SINE/5S-Deu-L2	(165)	410	309	906941
517	32.1	9.2	2.9	chr12	89390960	89391273	(43884036)	C	L2b	LINE/L2	(33)	3342	3007	906942
428	29.7	8.3	11.3	chr12	89828131	89828528	(43446781)	+	L4_C_Mam	LINE/RTE-X	4552	4936	(202)	907631
460	22.7	0.0	0.0	chr12	89828707	89828803	(43446506)	+	Tigger16a	DNA/TcMar-Tigger	860	956	(1)	907650
321	22.1	1.1	3.4	chr12	93701153	93701241	(39574068)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	426	913987
43	0.0	0.0	0.0	chr12	93701296	93701332	(39573977)	+	(AC)n	Simple_repeat	1	37	(0)	913988
519	19.5	0.0	9.2	chr12	93701358	93701498	(39573811)	C	MLT1J	LTR/ERVL-MaLR	(119)	393	266	913987
204	21.5	11.5	0.0	chr12	93785784	93785874	(39489435)	+	MIRb	SINE/MIR	24	139	(129)	914118
1086	24.3	7.7	3.9	chr12	93803123	93803508	(39471801)	+	MLT1J1	LTR/ERVL-MaLR	18	419	(25)	914150
2018	12.7	0.6	4.0	chr12	108627792	108628113	(24647196)	+	AluJb	SINE/Alu	1	311	(1)	940702
1947	15.5	0.3	1.6	chr12	108628114	108628284	(24647025)	+	AluJb	SINE/Alu	137	304	(8)	940701
777	28.9	1.6	2.9	chr12	108628285	108628317	(24646992)	+	MIR	SINE/MIR	221	251	(11)	940700
54	0.0	0.0	0.0	chr12	108628319	108628364	(24646945)	+	(AC)n	Simple_repeat	1	46	(0)	940703
496	21.7	6.5	4.3	chr12	108628808	108628975	(24646334)	+	MIR	SINE/MIR	18	193	(69)	940704
629	24.8	0.0	3.8	chr12	108833702	108833860	(24441449)	+	MER3	DNA/hAT-Charlie	53	205	(4)	941083
762	28.5	5.8	1.7	chr12	108838747	108839042	(24436267)	+	L4_A_Mam	LINE/RTE-X	4657	4965	(25)	941093
183	33.7	0.0	8.9	chr12	108839073	108839173	(24436136)	+	L2c	LINE/L2	3295	3386	(1)	941094
2249	13.9	5.8	2.7	chr12	108855068	108855500	(24419809)	+	L1MB7	LINE/L1	5729	6152	(32)	941121
4232	6.0	4.3	0.0	chr12	110271335	110271864	(23003445)	C	MER41A	LTR/ERV1	(0)	554	1	944394
255	29.8	0.0	0.0	chr12	110271866	110271922	(23003387)	C	L2a	LINE/L2	(95)	3331	3275	944395
2223	9.1	1.3	0.3	chr12	120291111	120291406	(12983903)	+	AluSq	SINE/Alu	8	306	(7)	966630
2449	7.3	1.0	0.0	chr12	121924427	121924729	(11350580)	C	AluSq2	SINE/Alu	(7)	306	1	970696
1112	24.3	14.7	0.6	chr12	121942093	121942432	(11332877)	C	L1MB8	LINE/L1	(13)	6165	5770	970739
1365	24.6	10.9	4.4	chr12	121965115	121965722	(11309587)	+	L1ME3G	LINE/L1	71	688	(236)	970790
1136	26.4	7.7	1.0	chr12	122064182	122064568	(11210741)	+	MLT1K	LTR/ERVL-MaLR	145	559	(36)	971015
897	19.8	6.0	0.0	chr12	122064652	122064838	(11210471)	+	MIR	SINE/MIR	64	262	(0)	971016
2034	9.5	4.7	0.3	chr12	124909526	124909808	(8365501)	C	AluSq	SINE/Alu	(17)	296	1	977134
193	24.5	11.7	0.0	chr12	124910736	124910788	(8364521)	C	L3	LINE/CR1	(198)	3901	3842	977135
1215	16.6	4.7	0.5	chr12	124911273	124911477	(8363832)	C	AluSx1	SINE/Alu	(21)	291	78	977136
331	29.4	17.5	6.5	chr12	124940369	124940722	(8334587)	C	L2a	LINE/L2	(18)	3357	2960	977203
388	31.2	6.9	1.4	chr12	124940734	124940951	(8334358)	C	L2a	LINE/L2	(560)	2859	2629	977203
300	34.8	5.4	7.1	chr12	124940953	124941164	(8334145)	C	L1MC5	LINE/L1	(2137)	7167	6963	977204
240	34.7	0.0	0.0	chr12	126667639	126667733	(6607576)	+	MER5A1	DNA/hAT-Charlie	7	101	(65)	980184
331	26.4	16.9	8.9	chr13	30743166	30743456	(83620872)	+	L2a	LINE/L2	3106	3424	(2)	1010303
855	32.8	6.0	4.2	chr13	30743468	30743894	(83620434)	+	L2c	LINE/L2	2933	3367	(20)	1010304
3791	23.4	7.9	2.3	chr13	32151785	32153711	(82210617)	+	L1ME1	LINE/L1	4125	6179	(0)	1012365
398	31.6	5.3	3.0	chr13	33918329	33918548	(80445780)	+	MIRb	SINE/MIR	26	266	(2)	1015034
2023	13.0	0.7	1.4	chr13	34206889	34207197	(80157131)	C	AluSz6	SINE/Alu	(0)	312	1	1015466
1749	22.0	6.3	2.9	chr13	34207198	34207493	(80156835)	C	MLT1D	LTR/ERVL-MaLR	(182)	323	13	1015465
530	22.4	6.2	2.7	chr13	34207505	34207676	(80156652)	+	MLT1G	LTR/ERVL-MaLR	357	560	(35)	1015464
446	32.3	6.6	1.2	chr13	34208522	34208778	(80155550)	C	L3	LINE/CR1	(166)	3933	3662	1015469
447	32.0	12.8	5.8	chr13	34208783	34209247	(80155081)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	11	1015470
6331	21.8	5.9	7.5	chr13	34263836	34265841	(80098487)	C	MER57A-int	LTR/ERV1	(1337)	4850	2945	1015551
1334	27.8	10.7	3.2	chr13	35552485	35552891	(78811437)	C	L3	LINE/CR1	(1192)	2907	2459	1017276
850	30.6	13.4	3.4	chr13	37621870	37622489	(76741839)	C	MamRep605	LTR?	(53)	796	105	1020230
16	16.2	2.2	4.3	chr13	39776226	39776270	(74588058)	+	GA-rich	Low_complexity	1	46	(0)	1023128
786	30.0	5.9	3.2	chr13	40231155	40231467	(74132861)	+	Charlie16a	DNA/hAT-Charlie	1	322	(20)	1023769
4290	8.0	0.2	0.9	chr13	40649908	40650465	(73713863)	C	MER41A	LTR/ERV1	(0)	554	1	1024444
1614	17.7	13.0	0.9	chr13	44797626	44798059	(69566269)	C	LTR54B	LTR/ERV1	(4)	494	1	1030980
17	8.8	0.0	0.0	chr13	44798315	44798338	(69565990)	+	(T)n	Simple_repeat	1	24	(0)	1030981
310	26.2	18.8	1.2	chr13	44816223	44816388	(69547940)	C	MIRb	SINE/MIR	(10)	258	57	1031013
473	29.4	0.8	2.3	chr13	45220001	45220129	(69144199)	+	L2a	LINE/L2	3299	3425	(1)	1031815
272	37.2	2.1	0.0	chr13	45220179	45220272	(69144056)	C	MamRTE1	LINE/RTE-BovB	(208)	3604	3509	1031821
248	28.3	0.0	0.0	chr13	45220290	45220342	(69143986)	C	L2b	LINE/L2	(0)	3375	3323	1031822
185	29.3	9.6	2.6	chr13	49314192	49314268	(65050060)	+	MIR	SINE/MIR	8	90	(172)	1038176
474	22.2	12.9	9.1	chr13	52158799	52159006	(62205322)	+	LTR8B	LTR/ERV1	1	217	(603)	1042686
421	25.2	7.5	1.9	chr13	52159021	52159236	(62205092)	+	LTR8B	LTR/ERV1	449	770	(50)	1042686
990	25.2	10.6	0.9	chr13	60329097	60329520	(54034808)	C	Charlie20a	DNA/hAT-Charlie	(161)	646	177	1053355
420	34.1	3.2	1.1	chr13	63190532	63190715	(51173613)	+	ERVL-E-int	LTR/ERVL	1355	1542	(4125)	1056959
565	31.8	0.6	1.1	chr13	66975368	66975542	(47388786)	C	MIR	SINE/MIR	(18)	244	71	1061697
273	27.4	13.3	4.6	chr13	67740758	67740887	(46623441)	C	L2a	LINE/L2	(0)	3426	3284	1062656
4008	12.7	1.7	2.8	chr13	67741034	67741674	(46622654)	+	MER41B	LTR/ERV1	1	634	(0)	1062657
232	20.8	2.0	0.0	chr13	69458107	69458154	(44906174)	C	MIR	SINE/MIR	(10)	252	204	1064799
520	23.5	2.2	0.0	chr13	71886886	71887017	(42477311)	C	L1MC4	LINE/L1	(813)	7229	7095	1068047
862	22.2	5.7	1.7	chr13	71887061	71887294	(42477034)	C	L1MC4	LINE/L1	(1028)	7014	6771	1068047
262	35.0	7.4	0.0	chr13	75300808	75300944	(39063384)	C	MIR3	SINE/MIR	(11)	197	50	1073118
278	25.6	5.8	0.0	chr13	75596895	75596976	(38767352)	+	L3	LINE/CR1	2397	2483	(1616)	1073625
960	20.3	1.7	2.3	chr13	75597213	75597389	(38766939)	+	FAM	SINE/Alu	2	177	(8)	1073627
32	0.0	0.0	0.0	chr13	80084486	80084515	(34279813)	+	(T)n	Simple_repeat	1	30	(0)	1079751
13	18.9	0.0	0.0	chr13	80925885	80925914	(33438414)	+	(TTTAT)n	Simple_repeat	1	30	(0)	1080899
2132	10.9	2.1	0.0	chr13	80925920	80926195	(33438133)	+	AluSx	SINE/Alu	3	284	(28)	1080900
453	31.7	0.8	0.0	chr13	91166875	91166997	(23197331)	+	MIRb	SINE/MIR	31	154	(114)	1093870
232	25.9	8.0	1.2	chr13	91168233	91168314	(23196014)	+	MIRb	SINE/MIR	177	264	(4)	1093870
535	28.7	3.2	0.0	chr13	91168312	91168461	(23195867)	C	MIRb	SINE/MIR	(60)	208	54	1093873
341	27.5	3.8	4.8	chr13	94020396	94020582	(20343746)	C	L1MB7	LINE/L1	(7332)	185	1	1097694
526	32.7	4.9	6.5	chr13	97252203	97252889	(17111439)	C	L1ME4a	LINE/L1	(1338)	4808	4134	1102715
363	34.1	11.2	2.7	chr13	101661195	101661414	(12702914)	C	L1MEd	LINE/L1	(6329)	757	517	1109693
312	34.4	4.1	2.6	chr13	101698492	101698685	(12665643)	+	Charlie13b	DNA/hAT-Charlie	300	496	(16)	1109747
31	3.3	0.0	0.0	chr13	105463085	105463115	(8901213)	+	(AC)n	Simple_repeat	1	31	(0)	1114735
270	34.3	0.0	0.0	chr13	107749019	107749117	(6615211)	C	MER103C	DNA/hAT-Charlie	(4)	293	195	1117855
43	0.0	0.0	0.0	chr13	107749129	107749165	(6615163)	+	(TG)n	Simple_repeat	1	37	(0)	1117856
12	10.7	2.9	5.7	chr13	109699191	109699224	(4665104)	+	(ATTCAA)n	Simple_repeat	1	35	(0)	1120400
256	37.6	0.9	0.8	chr13	113850684	113851692	(512636)	+	(ATGG)n	Simple_repeat	1	1018	(0)	1125057
294	26.4	7.8	3.6	chr14	23469077	23469186	(83574532)	C	MIR3	SINE/MIR	(49)	159	45	1132899
476	31.3	6.1	2.4	chr14	32456921	32457172	(74586546)	+	Charlie19a	DNA/hAT-Charlie	52	313	(73)	1145177
197	40.3	8.3	1.9	chr14	32507710	32507924	(74535794)	C	L2b	LINE/L2	(217)	3158	2929	1145241
393	29.4	11.0	2.4	chr14	32507929	32508122	(74535596)	+	MIR3	SINE/MIR	3	201	(7)	1145242
304	30.1	6.7	2.4	chr14	32561300	32561455	(74482263)	+	MIR3	SINE/MIR	42	197	(11)	1145329
345	28.8	7.0	1.5	chr14	32593482	32593615	(74450103)	+	L3b	LINE/CR1	5091	5232	(0)	1145373
223	35.4	9.8	0.0	chr14	32593685	32593831	(74449887)	C	MIR3	SINE/MIR	(31)	177	15	1145374
191	30.7	9.6	0.0	chr14	32593869	32593943	(74449775)	C	L2b	LINE/L2	(35)	3340	3258	1145375
2827	1.0	0.0	0.0	chr14	49586580	49586879	(57456839)	+	7SLRNA	srpRNA	1	300	(20)	1168209
556	27.7	2.9	6.7	chr14	50002225	50002479	(57041239)	C	MER103C	DNA/hAT-Charlie	(49)	248	4	1169072
973	14.4	0.0	0.0	chr14	50225130	50225254	(56818464)	C	AluJr	SINE/Alu	(187)	125	1	1169563
1327	7.2	1.2	0.0	chr14	50937977	50938143	(56105575)	+	MER41B	LTR/ERV1	2	170	(464)	1170711
2151	12.0	0.3	0.3	chr14	50938212	50938511	(56105207)	C	AluSx	SINE/Alu	(12)	300	1	1170712
261	16.1	1.8	5.1	chr14	51532894	51532952	(55510766)	+	L2b	LINE/L2	3303	3359	(16)	1171613
546	31.4	9.3	3.9	chr14	54599934	54600361	(52443357)	+	L4_C_Mam	LINE/RTE-X	3422	3839	(1299)	1176208
283	38.4	6.3	3.0	chr14	54600462	54600630	(52443088)	+	L4_C_Mam	LINE/RTE-X	4023	4197	(941)	1176208
11	22.8	0.0	7.5	chr14	55107922	55107974	(51935744)	+	(CATGAG)n	Simple_repeat	1	53	(0)	1177072
350	33.6	13.8	4.4	chr14	55557295	55557661	(51486057)	+	MamRTE1	LINE/RTE-BovB	3236	3642	(170)	1177920
2342	8.9	2.0	0.0	chr14	59358561	59358852	(47684866)	+	AluSx1	SINE/Alu	1	298	(14)	1183609
254	13.6	6.4	0.0	chr14	61104302	61104345	(45939373)	C	MLT1B	LTR/ERVL-MaLR	(1)	594	548	1185992
1939	16.9	4.2	1.4	chr14	61104356	61104722	(45938996)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	13	1185992
16	0.0	0.0	0.0	chr14	61146070	61146087	(45897631)	+	(AC)n	Simple_repeat	1	18	(0)	1186035
327	28.6	9.5	0.8	chr14	61179254	61179387	(45864331)	C	L2a	LINE/L2	(3)	3423	3277	1186098
282	32.7	0.0	0.2	chr14	61462858	61462964	(45580754)	C	MIRb	SINE/MIR	(138)	130	19	1186548
270	32.6	9.7	0.0	chr14	61463044	61463245	(45580473)	+	MIRb	SINE/MIR	22	254	(14)	1186549
2243	8.2	0.0	0.0	chr14	61583971	61584267	(45459451)	C	AluSc	SINE/Alu	(0)	309	11	1186719
1726	17.6	6.7	4.0	chr14	61584268	61584503	(45459215)	+	MLT1B	LTR/ERVL-MaLR	160	389	(1)	1186718
278	32.7	9.3	4.9	chr14	61584504	61584637	(45459081)	+	L2c	LINE/L2	2728	2872	(547)	1186717
4404	11.3	1.9	0.2	chr14	64363425	64364047	(42679671)	+	MER41B	LTR/ERV1	1	634	(0)	1191135
24	15.4	0.0	2.2	chr14	67986012	67986056	(39057662)	+	(TG)n	Simple_repeat	1	45	(0)	1197054
2513	4.7	0.3	4.4	chr14	70359990	70360306	(36683412)	+	AluSq10	SINE/Alu	1	304	(9)	1201067
2384	9.7	0.0	1.0	chr14	71290702	71291012	(35752706)	C	AluSz	SINE/Alu	(4)	308	1	1202561
4135	11.4	1.6	7.6	chr14	71291013	71291155	(35752563)	C	MER41B	LTR/ERV1	(500)	134	1	1202559
316	27.6	14.5	3.1	chr14	74620666	74620817	(32422901)	+	MIRb	SINE/MIR	14	188	(42)	1208847
2319	9.6	0.3	0.0	chr14	75282789	75283079	(31760639)	+	AluSp	SINE/Alu	1	292	(21)	1210111
4063	8.7	0.6	1.6	chr14	75751740	75752299	(31291419)	C	MER41A	LTR/ERV1	(0)	554	1	1211025
16	17.3	2.6	0.0	chr14	76953670	76953708	(30090010)	+	G-rich	Low_complexity	1	40	(0)	1213283
2417	9.9	0.0	0.6	chr14	76953898	76954211	(30089507)	+	AluSq2	SINE/Alu	1	312	(1)	1213284
2100	11.4	2.4	0.0	chr14	80425439	80425762	(26617956)	C	MER44D	DNA/TcMar-Tigger	(5)	700	369	1219191
1011	16.1	19.0	1.4	chr14	80425772	80425991	(26617727)	+	Tigger7	DNA/TcMar-Tigger	80	347	(2144)	1219192
4691	10.6	0.3	0.2	chr14	84484370	84485002	(22558716)	+	MER41B	LTR/ERV1	1	634	(0)	1224856
247	22.0	0.0	0.3	chr14	90331510	90331569	(16712149)	C	MIRc	SINE/MIR	(62)	168	110	1233689
18	28.3	1.0	5.9	chr14	91510623	91510722	(15532996)	+	(CGGCCC)n	Simple_repeat	1	101	(0)	1235829
11221	25.7	2.3	1.5	chr14	92622868	92625542	(14418176)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	4907	1237899
7512	25.4	5.1	1.8	chr14	92625544	92627789	(14415929)	C	HERVIP10F-int	LTR/ERV1	(5409)	2376	26	1237900
1534	20.4	5.0	0.0	chr14	94344980	94345362	(12698356)	+	L1MA9	LINE/L1	5908	6310	(2)	1240982
1909	24.2	7.2	0.9	chr14	102262461	102263111	(4780607)	C	Kanga2_a	DNA/TcMar-Tc2	(95)	793	99	1254516
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
3646	14.7	4.8	7.2	chr15	24857700	24858408	(77132781)	C	LTR8	LTR/ERV1	(0)	691	1	1269378
1877	12.5	1.1	2.9	chr15	24858517	24858797	(77132392)	+	AluSg	SINE/Alu	2	277	(33)	1269379
3398	11.8	1.6	0.2	chr15	24858798	24859299	(77131890)	+	LTR10D	LTR/ERV1	4	512	(1)	1269380
3808	9.4	4.5	0.0	chr15	24859595	24860123	(77131066)	C	MER41A	LTR/ERV1	(0)	554	1	1269381
12	13.9	0.0	0.0	chr15	24860214	24860237	(77130952)	+	(AAAT)n	Simple_repeat	1	24	(0)	1269382
1912	21.9	12.8	11.0	chr15	33083104	33083664	(68907525)	+	MER21C	LTR/ERVL	1	592	(346)	1280824
4252	12.8	1.3	0.5	chr15	33083665	33084293	(68906896)	+	MER41B	LTR/ERV1	1	634	(0)	1280825
282	22.2	8.7	10.0	chr15	35293458	35293597	(66697592)	C	MER135	DNA	(30)	198	61	1284202
476	24.6	0.0	1.6	chr15	35293490	35293613	(66697576)	+	MER135	DNA	74	195	(33)	1284202
1017	26.2	4.9	4.6	chr15	35311665	35311948	(66679241)	+	L3	LINE/CR1	3814	4098	(1)	1284224
438	29.8	11.2	1.6	chr15	35518813	35519006	(66472183)	C	MIRb	SINE/MIR	(3)	265	51	1284472
272	32.8	5.5	2.8	chr15	37112441	37112581	(64878608)	+	Tigger16b	DNA/TcMar-Tigger	192	336	(0)	1286533
2429	7.0	0.3	0.0	chr15	41230083	41230382	(60760807)	C	AluSx	SINE/Alu	(11)	301	1	1292843
271	15.7	8.8	2.4	chr15	41230387	41230471	(60760718)	+	Charlie16a	DNA/hAT-Charlie	138	228	(114)	1292844
233	26.0	0.0	0.0	chr15	42427383	42427432	(59563757)	+	L2b	LINE/L2	3326	3375	(0)	1295080
826	9.4	0.0	0.0	chr15	42427592	42427697	(59563492)	C	U6	snRNA	(1)	106	1	1295081
350	27.5	13.0	6.8	chr15	44102867	44103131	(57888058)	+	UCON8	DNA	546	829	(286)	1298179
202	33.6	10.6	1.8	chr15	44726939	44727050	(57264139)	+	MIRb	SINE/MIR	50	172	(96)	1299466
1318	15.4	1.7	0.9	chr15	44727256	44727484	(57263705)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	6	1299467
16	12.4	0.0	7.1	chr15	48389548	48389589	(53601600)	+	(TCTCC)n	Simple_repeat	1	42	(0)	1304768
193	23.5	7.3	0.0	chr15	52093951	52094001	(49897188)	C	MIR	SINE/MIR	(4)	258	204	1310706
207	31.8	8.7	3.1	chr15	59295611	59295740	(42695449)	C	MIRc	SINE/MIR	(3)	265	128	1321783
190	30.6	0.0	0.0	chr15	60371709	60371757	(41619432)	C	MIR1_Amn	SINE/MIR	(122)	108	60	1323664
2165	9.9	1.1	0.0	chr15	60371871	60372153	(41619036)	+	AluSp	SINE/Alu	2	287	(26)	1323665
427	26.2	0.0	0.0	chr15	60396629	60396731	(41594458)	+	Tigger16a	DNA/TcMar-Tigger	812	914	(43)	1323703
290	29.7	2.8	8.6	chr15	60396904	60397054	(41594135)	C	MIRc	SINE/MIR	(1)	267	126	1323704
241	28.2	4.9	3.7	chr15	60606208	60606288	(41384901)	+	L2c	LINE/L2	3306	3387	(0)	1324055
633	36.5	6.1	3.5	chr15	62290897	62291293	(39699896)	C	L3	LINE/CR1	(133)	3966	3559	1326639
850	27.5	16.2	2.6	chr15	62291360	62291825	(39699364)	C	L3	LINE/CR1	(2759)	1340	799	1326640
2078	13.6	0.0	1.4	chr15	63073081	63073375	(38917814)	+	AluSz	SINE/Alu	1	291	(21)	1327898
273	30.7	13.8	6.2	chr15	63075381	63075540	(38915649)	C	MIR3	SINE/MIR	(21)	187	14	1327901
14	16.8	4.7	2.2	chr15	63870827	63870869	(38120320)	+	(CTCAGAG)n	Simple_repeat	1	45	(0)	1329297
348	25.9	13.5	2.5	chr15	63870875	63871033	(38120156)	C	MIRc	SINE/MIR	(25)	183	6	1329298
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
2073	4.4	0.7	12.4	chr15	65296541	65296879	(36694310)	+	AluY	SINE/Alu	4	302	(9)	1332325
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
237	28.8	9.8	7.7	chr15	65305347	65305533	(36685656)	C	L1M5	LINE/L1	(561)	5681	5486	1332348
2284	8.0	1.3	1.0	chr15	65305534	65305844	(36685345)	+	AluSq	SINE/Alu	2	313	(0)	1332349
248	27.7	11.4	1.0	chr15	67089396	67089497	(34901692)	C	MIRc	SINE/MIR	(22)	246	133	1336056
523	20.3	7.2	2.4	chr15	67105115	67105254	(34885935)	+	MIR3	SINE/MIR	44	186	(22)	1336083
2021	26.8	9.3	4.6	chr15	69180263	69181328	(32809861)	C	L2a	LINE/L2	(1)	3425	2301	1339780
312	31.8	5.8	6.4	chr15	69181330	69181766	(32809423)	C	L2-3_Crp	LINE/L2	(1008)	1088	655	1339781
479	30.3	2.2	6.8	chr15	70862934	70863124	(31128065)	+	MER91A	DNA/hAT-Tip100	15	196	(0)	1342888
436	31.4	2.2	1.1	chr15	70863149	70863325	(31127864)	+	MER5A	DNA/hAT-Charlie	11	189	(0)	1342889
184	31.9	5.0	10.5	chr15	70863364	70863468	(31127721)	C	L2c	LINE/L2	(23)	3364	3266	1342890
241	29.9	2.8	2.8	chr15	71252163	71252303	(30738886)	C	UCON43	Unknown	(6)	166	26	1343442
318	23.1	19.7	1.4	chr15	71717248	71717392	(30273797)	+	L1ME5	LINE/L1	5755	5932	(262)	1344228
331	21.5	9.7	2.1	chr15	71717471	71717565	(30273624)	+	L1ME5	LINE/L1	6084	6186	(8)	1344228
1155	24.6	11.7	2.4	chr15	73650647	73651025	(28340164)	+	MLT1L	LTR/ERVL-MaLR	144	562	(48)	1347472
29	21.6	0.0	2.7	chr15	73651149	73651223	(28339966)	+	A-rich	Low_complexity	1	75	(0)	1347473
413	26.7	11.1	0.6	chr15	78302593	78302754	(23688435)	+	MER112	DNA/hAT-Charlie	81	261	(0)	1355602
450	31.3	5.4	0.7	chr15	86159172	86159366	(15831823)	C	MIRb	SINE/MIR	(36)	232	22	1369014
2164	14.5	0.0	0.0	chr15	86163446	86163749	(15827440)	+	AluSx1	SINE/Alu	1	304	(8)	1369021
375	25.0	3.7	2.5	chr15	86163928	86164075	(15827114)	+	LTR88c	LTR/Gypsy?	52	201	(636)	1369022
3280	13.7	2.6	0.6	chr15	90648416	90648950	(11342239)	+	MER41B	LTR/ERV1	2	547	(87)	1376776
274	34.4	8.6	0.8	chr16	1960842	1960970	(88377375)	+	MIRb	SINE/MIR	120	259	(9)	1396719
2251	15.1	4.0	1.9	chr16	4140295	4140713	(86197632)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1400524
530	31.5	4.2	2.7	chr16	4140714	4140838	(86197507)	+	MLT1L	LTR/ERVL-MaLR	485	609	(1)	1400523
3013	18.5	5.9	8.5	chr16	4539130	4539401	(85798944)	+	LTR8	LTR/ERV1	1	254	(437)	1401338
3956	11.1	0.6	1.6	chr16	10325688	10326111	(80012234)	C	MER41A	LTR/ERV1	(134)	420	1	1413221
239	27.7	2.1	10.5	chr16	10326112	10326148	(80012197)	C	MER21A	LTR/ERVL	(708)	223	188	1413223
3911	14.2	2.0	8.5	chr16	10326149	10326888	(80011457)	C	LTR8	LTR/ERV1	(0)	691	1	1413224
745	4.8	0.0	0.0	chr16	11976145	11976228	(78362117)	C	AluSx	SINE/Alu	(228)	84	1	1416958
328	31.5	3.8	0.0	chr16	11976271	11976397	(78361948)	+	L2a	LINE/L2	3035	3166	(260)	1416955
30	0.0	0.0	0.0	chr16	20944777	20944802	(69393543)	+	(AC)n	Simple_repeat	1	26	(0)	1436771
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
2374	13.5	1.8	2.1	chr16	21076086	21076453	(69261892)	+	MLT1B	LTR/ERVL-MaLR	1	374	(16)	1437098
1301	18.0	17.8	2.4	chr16	21076454	21076869	(69261476)	+	LTR54B	LTR/ERV1	1	494	(4)	1437099
13	27.9	1.7	3.3	chr16	30949046	30949105	(59389240)	+	(GCTCCG)n	Simple_repeat	1	61	(0)	1459271
582	20.0	11.2	8.4	chr16	48122850	48123040	(42215305)	C	MIRb	SINE/MIR	(59)	209	13	1468156
532	32.5	10.8	1.9	chr16	48123103	48123312	(42215033)	+	L3	LINE/CR1	3849	4079	(20)	1468155
457	31.5	9.8	0.7	chr16	48126548	48126781	(42211564)	C	MIR	SINE/MIR	(0)	262	14	1468164
322	18.5	0.0	1.5	chr16	53755657	53755722	(36582623)	+	MLT1J	LTR/ERVL-MaLR	88	152	(360)	1478375
4206	10.4	2.8	3.9	chr16	57226261	57226901	(33111444)	C	MER41B	LTR/ERV1	(0)	634	1	1484598
575	29.7	6.8	1.9	chr16	57226919	57227129	(33111216)	+	MIRc	SINE/MIR	26	245	(23)	1484599
228	30.7	3.3	2.2	chr16	66517394	66517483	(23820862)	+	MIR	SINE/MIR	162	252	(10)	1499879
18	12.2	0.0	0.0	chr16	73172646	73172672	(17165673)	+	(GA)n	Simple_repeat	1	27	(0)	1512568
886	23.7	8.7	5.7	chr16	84985463	84985672	(5352673)	+	L1MC5	LINE/L1	8755	8959	(345)	1533964
244	27.1	0.0	0.0	chr16	89922328	89922386	(415959)	+	UCON55	DNA/TcMar-Tigger	69	127	(65)	1542085
12	9.7	0.0	0.0	chr17	1787258	1787279	(81470162)	+	(TTCC)n	Simple_repeat	1	22	(0)	1547800
13	14.9	6.0	5.7	chr17	2192123	2192172	(81065269)	+	GA-rich	Low_complexity	1	53	(0)	1548623
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
912	22.1	17.9	1.3	chr17	14062357	14062811	(69194630)	+	LTR50	LTR/ERVL	131	795	(0)	1570851
317	32.8	3.9	3.9	chr17	16286932	16287061	(66970380)	+	L2b	LINE/L2	3244	3373	(2)	1574605
273	24.8	13.5	0.0	chr17	16287121	16287229	(66970212)	+	LTR16E2	LTR/ERVL	50	175	(393)	1574606
453	26.1	10.7	4.4	chr17	16287285	16287512	(66969929)	+	LTR16E2	LTR/ERVL	294	537	(31)	1574606
246	27.7	10.6	0.0	chr17	17835719	17835819	(65421622)	+	L2b	LINE/L2	2728	2840	(579)	1577444
289	33.4	14.9	1.9	chr17	17835886	17836193	(65421248)	+	L2b	LINE/L2	3003	3357	(18)	1577444
1609	14.0	0.4	1.9	chr17	19063349	19063619	(64193822)	+	AluSx	SINE/Alu	1	267	(45)	1579727
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
6522	7.4	2.2	0.1	chr17	27207653	27209219	(56048222)	+	L1PA7	LINE/L1	4547	6151	(3)	1586285
1585	12.7	14.5	0.0	chr17	28282689	28282948	(54974493)	C	AluSz6	SINE/Alu	(8)	304	1	1588379
13	17.7	4.2	4.0	chr17	28282979	28283026	(54974415)	+	(ACAGAAT)n	Simple_repeat	1	50	(0)	1588380
384	35.3	8.1	1.1	chr17	31052141	31052495	(52204946)	C	L3	LINE/CR1	(354)	3745	3364	1593898
3533	17.6	12.2	0.4	chr17	32161016	32161738	(51095703)	C	LTR8B	LTR/ERV1	(0)	820	1	1596217
1549	23.9	12.8	8.7	chr17	32161739	32162381	(51095060)	C	MER21C	LTR/ERVL	(164)	774	11	1596215
464	18.5	14.2	0.4	chr17	41548340	41548502	(41708939)	C	MIRb	SINE/MIR	(34)	234	35	1613793
381	28.7	8.4	0.0	chr17	41548571	41548734	(41708707)	+	MIRc	SINE/MIR	25	203	(65)	1613794
1967	11.0	3.6	0.0	chr17	41691803	41692094	(41565347)	C	AluSq	SINE/Alu	(9)	304	2	1614056
371	23.4	4.1	2.1	chr17	41692484	41692579	(41564862)	+	Tigger3a	DNA/TcMar-Tigger	1	98	(250)	1614057
929	12.1	8.0	2.3	chr17	41692616	41692792	(41564649)	+	MER30	DNA/hAT-Charlie	43	230	(0)	1614058
1150	16.9	1.5	0.5	chr17	41692793	41692988	(41564453)	+	Tigger3c	DNA/TcMar-Tigger	404	601	(1)	1614059
514	21.3	10.4	4.6	chr17	41693148	41693358	(41564083)	C	MSTD	LTR/ERVL-MaLR	(30)	435	81	1614060
1381	14.8	10.3	4.6	chr17	41693359	41693641	(41563800)	+	AluJb	SINE/Alu	1	301	(11)	1614061
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
16	16.6	0.0	0.0	chr17	46057096	46057122	(37200319)	+	A-rich	Low_complexity	1	27	(0)	1623297
1400	24.5	10.1	2.2	chr17	46057138	46057683	(37199758)	+	L1MC5	LINE/L1	8148	8741	(563)	1623298
192	26.2	0.0	0.0	chr17	46770854	46770895	(36486546)	C	MIRc	SINE/MIR	(120)	148	107	1624682
466	27.2	11.3	1.3	chr17	48792751	48792981	(34464460)	C	Tigger15a	DNA/TcMar-Tigger	(7)	708	452	1628497
180	23.9	0.0	4.2	chr17	48793010	48793057	(34464384)	C	L2c	LINE/L2	(41)	3346	3301	1628498
4579	9.7	2.2	1.0	chr17	48825536	48825977	(34431464)	C	MER41B	LTR/ERV1	(184)	450	1	1628573
495	29.0	7.1	0.0	chr17	48826001	48826169	(34431272)	+	MIRb	SINE/MIR	20	201	(67)	1628576
26	0.0	0.0	0.0	chr17	48826211	48826235	(34431206)	+	(T)n	Simple_repeat	1	25	(0)	1628577
458	11.5	0.0	0.0	chr17	48826381	48826441	(34431000)	+	AluYg6	SINE/Alu	1	61	(250)	1628578
264	13.2	0.0	0.0	chr17	48828505	48828542	(34428899)	C	AluSx	SINE/Alu	(49)	253	216	1628588
1888	8.8	0.8	0.0	chr17	48828543	48828780	(34428661)	C	AluSx	SINE/Alu	(72)	240	1	1628588
313	11.1	10.0	0.0	chr17	48828801	48828863	(34428578)	C	MER110A	LTR/ERV1	(398)	70	1	1628585
333	33.1	8.0	0.7	chr17	48945258	48945397	(34312044)	+	MIR	SINE/MIR	17	167	(95)	1628874
19	4.0	3.9	0.0	chr17	49515375	49515400	(33742041)	+	(AC)n	Simple_repeat	1	27	(0)	1630080
15	0.0	0.0	0.0	chr17	49515400	49515416	(33742025)	+	(AG)n	Simple_repeat	1	17	(0)	1630081
12	21.5	4.4	2.1	chr17	49515437	49515481	(33741960)	+	(GCAG)n	Simple_repeat	1	47	(0)	1630082
14	27.1	0.0	0.0	chr17	49515586	49515629	(33741812)	+	(CCTGAG)n	Simple_repeat	1	44	(0)	1630083
2161	12.7	19.4	0.7	chr17	55432554	55432967	(27824474)	C	LTR54	LTR/ERV1	(0)	510	1	1639622
2011	15.0	0.0	1.3	chr17	57947518	57947831	(25309610)	+	AluSz	SINE/Alu	2	311	(1)	1644177
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
300	23.6	12.9	12.1	chr17	58679172	58679272	(24578169)	+	MLT1D	LTR/ERVL-MaLR	199	292	(213)	1645507
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
29	0.0	3.2	0.0	chr17	59755096	59755126	(23502315)	+	(TTCTTT)n	Simple_repeat	1	32	(0)	1647877
2211	9.2	0.0	1.1	chr17	59755127	59755409	(23502032)	C	AluSx3	SINE/Alu	(31)	280	1	1647878
12	5.0	0.0	4.3	chr17	59756637	59756659	(23500782)	+	(TGTC)n	Simple_repeat	1	23	(0)	1647880
1034	29.1	5.4	9.7	chr17	59761277	59762173	(23495268)	C	L1MEc	LINE/L1	(5490)	910	55	1647883
822	22.4	2.8	4.1	chr17	59764263	59764333	(23493108)	+	L1ME1	LINE/L1	5958	6028	(151)	1647893
1695	18.3	2.0	1.0	chr17	59764334	59764623	(23492818)	C	AluJr	SINE/Alu	(19)	293	1	1647894
822	22.4	2.8	4.1	chr17	59764624	59764770	(23492671)	+	L1ME1	LINE/L1	6029	6173	(6)	1647893
16	18.9	0.0	0.0	chr17	59782812	59782841	(23474600)	+	A-rich	Low_complexity	1	30	(0)	1647933
2323	7.9	2.4	0.3	chr17	59782921	59783212	(23474229)	+	AluY	SINE/Alu	1	298	(13)	1647934
488	37.2	6.1	1.2	chr17	59783566	59783970	(23473471)	+	L2c	LINE/L2	2467	2892	(527)	1647935
50	0.0	0.0	0.0	chr17	59784101	59784143	(23473298)	+	(GT)n	Simple_repeat	1	43	(0)	1647936
23	17.0	2.1	0.0	chr17	59784144	59784187	(23473254)	+	GA-rich	Low_complexity	4	48	(0)	1647937
219	34.8	6.0	8.3	chr17	59784449	59784652	(23472789)	+	L2c	LINE/L2	3187	3385	(2)	1647935
26	16.9	0.0	0.0	chr17	59787516	59787539	(23469902)	+	(TTAA)n	Simple_repeat	1	24	(0)	1647941
2247	10.2	0.7	0.0	chr17	59787540	59787824	(23469617)	+	AluSx1	SINE/Alu	1	287	(25)	1647942
26	16.9	0.0	0.0	chr17	59787825	59787853	(23469588)	+	(TTAA)n	Simple_repeat	1	29	(0)	1647943
2256	12.7	0.0	0.0	chr17	59828835	59829142	(23428299)	+	AluSz	SINE/Alu	2	309	(3)	1648042
1186	15.0	19.1	0.0	chr17	59830130	59830349	(23427092)	C	AluJb	SINE/Alu	(30)	282	11	1648043
2263	8.6	3.5	0.3	chr17	59833956	59834256	(23423185)	C	AluSq2	SINE/Alu	(2)	311	1	1648054
2263	7.3	0.0	0.4	chr17	59842395	59842669	(23414772)	+	AluSx	SINE/Alu	1	274	(38)	1648068
3285	9.2	9.1	1.0	chr17	60573551	60574052	(22683389)	+	LTR35A	LTR/ERV1	1	547	(0)	1649562
789	14.2	0.7	3.6	chr17	60574053	60574166	(22683275)	+	L1MC4a	LINE/L1	7604	7718	(164)	1649561
22	19.9	1.6	3.2	chr17	60658962	60659022	(22598419)	+	(TAA)n	Simple_repeat	1	62	(0)	1649774
311	30.0	10.7	0.0	chr17	60817517	60817616	(22439825)	C	MIR3	SINE/MIR	(7)	201	90	1650103
267	23.9	8.6	5.5	chr17	61002931	61003076	(22254365)	C	HAL1	LINE/L1	(0)	2507	2357	1650379
353	24.1	14.5	4.5	chr17	61003063	61003327	(22254114)	C	HAL1	LINE/L1	(1233)	1274	979	1650379
330	20.4	14.7	5.8	chr17	61065103	61065274	(22192167)	C	L1M5	LINE/L1	(640)	5483	5294	1650459
335	36.4	12.9	2.1	chr17	61139684	61139924	(22117517)	C	L2c	LINE/L2	(45)	3342	3072	1650566
14	21.8	0.0	0.0	chr17	61145688	61145724	(22111717)	+	A-rich	Low_complexity	1	37	(0)	1650573
50	2.2	0.0	0.0	chr17	61246793	61246839	(22010602)	+	(GT)n	Simple_repeat	1	47	(0)	1650742
37	0.0	0.0	0.0	chr17	61397873	61397904	(21859537)	+	(AC)n	Simple_repeat	1	32	(0)	1650998
17	0.0	0.0	0.0	chr17	61397905	61397923	(21859518)	+	(GC)n	Simple_repeat	1	19	(0)	1650999
30	5.5	0.0	0.0	chr17	61409319	61409356	(21848085)	+	(CGGCCCCT)n	Simple_repeat	1	38	(0)	1651014
4052	10.4	1.9	2.1	chr17	62143664	62143828	(21113613)	+	MER61E	LTR/ERV1	1	161	(408)	1652362
2278	8.5	0.0	2.9	chr17	62143829	62144135	(21113306)	+	AluSg	SINE/Alu	1	298	(12)	1652363
4052	10.4	1.9	2.1	chr17	62144136	62144539	(21112902)	+	MER61E	LTR/ERV1	162	569	(0)	1652362
355	37.3	2.9	2.3	chr17	62718141	62718313	(20539128)	C	MIRb	SINE/MIR	(90)	178	5	1653570
21	22.0	4.2	2.7	chr17	62718822	62718892	(20538549)	+	(CTTCT)n	Simple_repeat	1	74	(0)	1653571
291	30.2	0.0	0.0	chr17	62792293	62792378	(20465063)	+	MIR	SINE/MIR	60	145	(117)	1653696
986	16.6	0.4	1.3	chr17	62792479	62794320	(20463121)	+	(CAC)n	Simple_repeat	1	1850	(0)	1653697
20	7.8	0.0	0.0	chr17	62820472	62820498	(20436943)	+	(TG)n	Simple_repeat	1	27	(0)	1653747
51	0.0	0.0	0.0	chr17	62820820	62820863	(20436578)	+	(GT)n	Simple_repeat	1	44	(0)	1653748
314	22.4	9.4	0.0	chr17	63097859	63097974	(20159467)	C	L1PA5	LINE/L1	(5130)	1112	985	1654221
848	31.4	6.1	2.6	chr17	63098004	63098431	(20159010)	C	L1PA5	LINE/L1	(5342)	900	457	1654221
193	25.0	7.7	0.0	chr17	63171794	63171841	(20085600)	C	L3	LINE/CR1	(3544)	555	504	1654366
3355	21.8	7.0	0.9	chr17	63246302	63247323	(20010118)	C	L1MB7	LINE/L1	(0)	6184	5099	1654480
584	33.2	4.2	0.9	chr17	63356654	63356863	(19900578)	+	MIRb	SINE/MIR	10	226	(42)	1654618
30	3.4	0.0	0.0	chr17	63358348	63358377	(19899064)	+	(AG)n	Simple_repeat	1	30	(0)	1654619
47	2.3	0.0	0.0	chr17	63358380	63358424	(19899017)	+	(TG)n	Simple_repeat	1	45	(0)	1654620
261	26.5	1.7	5.2	chr17	63460088	63460206	(19797235)	+	L2b	LINE/L2	3054	3166	(221)	1654738
3681	8.7	2.7	3.6	chr17	63460261	63460786	(19796655)	+	MER41C	LTR/ERV1	1	521	(0)	1654739
308	21.5	1.5	0.0	chr17	64497593	64497657	(18759784)	+	MER5A	DNA/hAT-Charlie	1	66	(123)	1656726
611	24.5	10.8	7.5	chr17	64682700	64682816	(18574625)	+	L1ME4a	LINE/L1	5550	5687	(437)	1657076
2066	12.9	8.7	0.8	chr17	64682817	64683167	(18574274)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1657077
611	24.5	10.8	7.5	chr17	64683168	64683283	(18574158)	+	L1ME4a	LINE/L1	5688	5797	(327)	1657076
1086	16.9	0.0	0.0	chr17	64724747	64724924	(18532517)	+	L1MD2	LINE/L1	5547	5724	(635)	1657189
29	12.8	5.7	5.4	chr17	65184729	65184816	(18072625)	+	(TCTTT)n	Simple_repeat	1	93	(0)	1658167
51	27.4	3.6	0.6	chr17	65184817	65184823	(18072618)	+	(TCTC)n	Simple_repeat	154	172	(0)	1658166
27	3.5	0.0	0.0	chr17	65184824	65184853	(18072588)	+	(TCCT)n	Simple_repeat	1	30	(0)	1658168
51	27.4	3.6	0.6	chr17	65184854	65184877	(18072564)	+	(TCTC)n	Simple_repeat	1	24	(0)	1658169
940	16.8	0.0	0.7	chr17	65184878	65185026	(18072415)	C	AluJr	SINE/Alu	(20)	292	145	1658170
17	5.0	0.0	0.0	chr17	66314842	66314862	(16942579)	+	(TC)n	Simple_repeat	1	21	(0)	1660081
271	34.2	12.2	2.9	chr17	66348568	66348841	(16908600)	C	Tigger19a	DNA/TcMar-Tigger	(16)	307	5	1660139
515	27.5	5.1	0.0	chr17	66507246	66507394	(16750047)	C	MIRb	SINE/MIR	(100)	168	12	1660381
279	25.4	0.0	0.0	chr17	66567947	66568017	(16689424)	+	L1M5	LINE/L1	5084	5154	(992)	1660470
2009	14.3	0.3	0.0	chr17	66568033	66568319	(16689122)	+	AluSz	SINE/Alu	1	288	(24)	1660471
2126	10.3	4.0	1.0	chr17	67339108	67339398	(15918043)	C	AluSx	SINE/Alu	(12)	300	1	1661829
30	0.0	0.0	0.0	chr17	67391061	67391086	(15866355)	+	(GT)n	Simple_repeat	1	26	(0)	1661941
184	30.2	0.0	1.9	chr17	67421725	67421778	(15835663)	+	MIR	SINE/MIR	82	134	(128)	1662011
200	30.5	4.7	2.4	chr17	67421809	67421892	(15835549)	C	L2c	LINE/L2	(20)	3367	3282	1662012
530	22.8	6.8	4.5	chr17	67444010	67444211	(15813230)	C	L1MC5	LINE/L1	(1)	9303	9097	1662068
1493	18.2	3.0	0.0	chr17	67491602	67491859	(15765582)	+	AluJr	SINE/Alu	46	311	(1)	1662160
622	13.5	2.0	0.0	chr17	69175736	69175831	(14081610)	C	MER44B	DNA/TcMar-Tigger	(0)	550	453	1665321
1561	17.2	3.0	0.0	chr17	69175834	69176089	(14081352)	C	MER44B	DNA/TcMar-Tigger	(287)	263	1	1665321
349	27.3	3.9	0.0	chr17	69430944	69431042	(13826399)	+	L1ME4c	LINE/L1	312	414	(416)	1665754
638	29.6	6.2	1.7	chr17	69431043	69431272	(13826169)	C	MIRb	SINE/MIR	(19)	249	9	1665755
185	32.6	4.3	2.2	chr17	69540172	69540262	(13717179)	+	OldhAT1	DNA/hAT-Ac	1005	1097	(1751)	1665955
14	18.8	0.0	2.6	chr17	71502208	71502245	(11755196)	+	A-rich	Low_complexity	1	38	(0)	1668902
235	18.4	3.9	0.0	chr17	72126688	72126736	(11130705)	+	X6B_LINE	LINE/CR1	1015	1065	(7)	1669844
1592	19.2	10.8	3.8	chr17	72417029	72417472	(10839969)	+	MLT1D	LTR/ERVL-MaLR	27	505	(0)	1670354
2515	7.7	0.0	0.3	chr17	72976569	72976878	(10280563)	+	AluSc	SINE/Alu	1	309	(0)	1671352
1026	23.1	14.7	7.6	chr17	72976953	72977467	(10279974)	+	MLT1E2	LTR/ERVL-MaLR	14	649	(4)	1671353
2346	8.0	0.3	0.0	chr17	72997265	72997552	(10259889)	C	AluSx1	SINE/Alu	(23)	289	1	1671399
3765	16.6	8.2	0.9	chr17	72997555	72998222	(10259219)	+	MER44C	DNA/TcMar-Tigger	2	722	(11)	1671400
444	26.3	17.1	1.7	chr17	75012148	75012383	(8245058)	C	L2a	LINE/L2	(4)	3422	3143	1675179
2064	17.8	3.6	10.8	chr17	75158231	75158711	(8098730)	C	MER41A	LTR/ERV1	(108)	446	1	1675475
339	25.6	11.1	8.2	chr17	75158712	75158754	(8098687)	+	MIRc	SINE/MIR	163	215	(53)	1675473
2049	10.5	0.0	0.0	chr17	75158765	75159050	(8098391)	+	AluSx4	SINE/Alu	1	286	(24)	1675477
462	11.8	23.4	0.0	chr17	75775853	75775937	(7481504)	+	FLAM_C	SINE/Alu	17	127	(16)	1676748
2309	9.0	0.0	0.0	chr17	75775945	75776234	(7481207)	+	AluSc	SINE/Alu	2	291	(18)	1676749
758	16.5	0.0	0.0	chr17	77109279	77109399	(6148042)	C	AluJr	SINE/Alu	(187)	125	5	1679472
1527	16.3	6.2	9.5	chr17	77109400	77109649	(6147792)	C	LTR54	LTR/ERV1	(259)	251	1	1679471
2040	15.8	0.0	0.0	chr17	77124082	77124379	(6133062)	+	AluJb	SINE/Alu	1	298	(14)	1679496
2240	11.0	0.3	0.0	chr17	77125870	77126161	(6131280)	+	AluSx	SINE/Alu	1	293	(19)	1679500
195	28.0	2.0	0.0	chr17	77287467	77287516	(5969925)	C	L2b	LINE/L2	(2)	3373	3323	1679808
1211	24.3	7.2	4.9	chr17	77323878	77324327	(5933114)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	7	1679880
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
514	29.6	11.1	1.0	chr17	78376149	78376438	(4881003)	C	L1ME4a	LINE/L1	(110)	6014	5692	1681757
17	12.3	6.5	2.0	chr17	78884099	78884144	(4373297)	+	(GAGCAG)n	Simple_repeat	1	49	(0)	1682626
19	14.3	7.5	4.2	chr17	79028119	79028185	(4229256)	+	(GCAG)n	Simple_repeat	1	72	(0)	1682864
315	33.6	8.6	4.9	chr17	80037420	80037644	(3219797)	+	L1ME4a	LINE/L1	5839	6072	(52)	1684340
1270	16.2	1.9	0.9	chr17	80254452	80254661	(3002780)	C	AluJo	SINE/Alu	(100)	212	1	1684749
467	32.7	4.9	3.1	chr17	80254896	80255154	(3002287)	+	L1ME3G	LINE/L1	308	571	(353)	1684750
365	33.7	4.0	4.9	chr17	80789726	80789928	(2467513)	C	L1MEa	LINE/L1	(5867)	203	3	1685533
274	33.9	2.9	4.0	chr17	81295874	81296030	(1961411)	C	L2c	LINE/L2	(177)	3198	3031	1686075
885	15.9	7.2	1.2	chr17	81507712	81507965	(1749476)	C	L1M4	LINE/L1	(684)	5496	5232	1686347
1112	16.1	1.4	7.1	chr17	81507980	81508165	(1749276)	C	AluJr	SINE/Alu	(13)	299	126	1686348
2279	10.6	0.0	0.7	chr17	81508166	81508467	(1748974)	+	AluY	SINE/Alu	1	300	(11)	1686349
19	20.2	5.9	0.0	chr17	81860579	81860629	(1396812)	+	(GC)n	Simple_repeat	1	54	(0)	1686834
1935	16.3	0.0	0.7	chr17	82003164	82003457	(1253984)	+	AluJr	SINE/Alu	1	292	(20)	1687045
2565	20.3	1.5	1.1	chr17	82338920	82339456	(917985)	+	MER41G	LTR/ERV1	347	885	(0)	1687504
2382	8.4	0.0	0.3	chr18	3622108	3622404	(76750881)	C	AluY	SINE/Alu	(15)	296	1	1694780
2375	10.0	0.3	0.0	chr18	3622794	3623103	(76750182)	C	AluSz	SINE/Alu	(1)	311	1	1694781
446	28.8	5.3	0.5	chr18	3623105	3623292	(76749993)	+	MIR	SINE/MIR	55	245	(17)	1694782
1993	15.1	5.4	3.1	chr18	8933610	8934124	(71439161)	C	LTR8B	LTR/ERV1	(237)	583	1	1702113
18	22.0	0.0	0.0	chr18	8934163	8934199	(71439086)	+	A-rich	Low_complexity	1	37	(0)	1702115
1248	19.2	0.0	0.5	chr18	8934242	8934454	(71438831)	C	LTR24	LTR/ERV1	(0)	467	256	1702116
360	24.2	0.0	14.9	chr18	23719955	23720095	(56653190)	+	L2a	LINE/L2	3304	3423	(3)	1716756
13	9.3	0.0	0.0	chr18	24426263	24426285	(55947000)	+	(AAAC)n	Simple_repeat	1	23	(0)	1717928
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
551	24.8	4.8	6.7	chr18	25786277	25786634	(54586651)	+	L1MEi	LINE/L1	1862	2212	(0)	1719805
330	32.0	5.2	0.7	chr18	25786637	25786660	(54586625)	+	L1ME3Cz	LINE/L1	2283	2307	(3839)	1719808
2243	13.6	3.6	0.5	chr18	25786661	25787038	(54586247)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1719809
349	29.1	2.2	1.7	chr18	25787039	25787161	(54586124)	+	L1ME3Cz	LINE/L1	2308	2436	(3710)	1719808
199	32.5	6.1	0.0	chr18	29077785	29077861	(51295424)	C	L2c	LINE/L2	(2)	3385	3304	1724575
2582	6.6	0.0	0.0	chr18	32299234	32299536	(48073749)	+	AluY	SINE/Alu	2	304	(7)	1729176
4567	17.2	3.3	0.3	chr18	32443128	32444293	(47928992)	+	L1MB7	LINE/L1	4975	6175	(9)	1729353
1990	15.7	0.0	0.0	chr18	41073387	41073673	(39299612)	C	AluSz	SINE/Alu	(25)	287	1	1740880
356	38.2	5.3	0.6	chr18	41074088	41074266	(39299019)	+	MIRb	SINE/MIR	47	234	(34)	1740881
237	38.0	1.0	0.0	chr18	43893187	43893286	(36479999)	C	MamSINE1	SINE/tRNA-RTE	(188)	102	2	1744799
13	12.0	0.0	3.5	chr18	43914108	43914136	(36459149)	+	A-rich	Low_complexity	1	29	(0)	1744825
383	36.1	4.0	1.7	chr18	44143020	44143191	(36230094)	C	MER117	DNA/hAT-Charlie	(13)	184	9	1745154
714	26.2	13.0	0.9	chr18	44143307	44143529	(36229756)	C	MIR	SINE/MIR	(2)	260	7	1745155
185	32.1	3.6	0.0	chr18	46939478	46939530	(33433755)	C	MIR	SINE/MIR	(2)	260	206	1749501
513	29.9	6.3	0.0	chr18	46940012	46940188	(33433097)	C	MIRb	SINE/MIR	(53)	215	27	1749502
248	24.6	1.7	0.0	chr18	54776527	54776583	(25596702)	C	L2a	LINE/L2	(70)	3356	3299	1761748
304	30.3	9.6	6.3	chr18	54776583	54776772	(25596513)	+	L2c	LINE/L2	3191	3387	(0)	1761745
1695	17.8	4.5	0.0	chr18	54776777	54777052	(25596233)	+	AluSg	SINE/Alu	1	289	(21)	1761749
240	31.8	2.3	0.0	chr18	55084244	55084369	(25288916)	+	Tigger15a	DNA/TcMar-Tigger	587	715	(0)	1762198
324	29.6	3.0	0.0	chr18	56650571	56650668	(23722617)	C	ERV3-16A3_LTR	LTR/ERVL	(138)	284	184	1764439
340	18.8	1.4	1.4	chr18	56650949	56651018	(23722267)	+	MLT1N2	LTR/ERVL-MaLR	7	76	(486)	1764440
448	33.2	2.8	2.4	chr18	58990801	58991050	(21382235)	C	LTR33	LTR/ERVL	(261)	270	26	1768235
2260	11.6	0.3	0.0	chr18	59154784	59155094	(21218191)	+	AluSx1	SINE/Alu	1	312	(0)	1768531
2063	14.3	0.3	0.3	chr18	59744531	59744830	(20628455)	C	AluSz	SINE/Alu	(12)	300	1	1769417
28	22.6	2.6	1.3	chr18	59748640	59748716	(20624569)	+	(TCTT)n	Simple_repeat	1	79	(0)	1769423
15	29.3	4.1	1.3	chr18	59903798	59903870	(20469415)	+	(ATAT)n	Simple_repeat	1	76	(0)	1769758
2005	15.0	0.0	0.3	chr18	59909792	59910098	(20463187)	+	AluSz6	SINE/Alu	1	306	(6)	1769765
2244	10.6	0.3	0.3	chr18	59910101	59910403	(20462882)	+	AluSx	SINE/Alu	1	303	(9)	1769766
185	35.2	9.9	0.0	chr18	68177954	68178044	(12195241)	+	MamRTE1	LINE/RTE-BovB	127	227	(3585)	1781420
12	16.5	0.0	0.0	chr18	68178131	68178157	(12195128)	+	(ATTT)n	Simple_repeat	1	27	(0)	1781421
1722	22.6	7.5	3.2	chr18	70044454	70044979	(10328306)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	1784006
668	34.4	8.9	3.5	chr18	71442432	71443139	(8930146)	+	MamRep605	LTR?	49	798	(51)	1785945
1462	27.9	8.9	4.9	chr18	71443430	71443636	(8929649)	+	L1MEc	LINE/L1	39	259	(6141)	1785946
3833	15.6	2.4	1.0	chr18	72343117	72343804	(8029481)	+	L1MA4A	LINE/L1	5425	6122	(181)	1787093
815	19.5	0.6	0.6	chr18	73691251	73691410	(6681875)	+	MER41C	LTR/ERV1	1	160	(361)	1788913
2522	15.1	1.8	0.7	chr18	73691411	73691858	(6681427)	+	MER50	LTR/ERV1	1	453	(281)	1788914
962	0.9	0.0	0.9	chr19	893484	893585	(57724031)	+	U6	snRNA	1	102	(5)	1797832
2278	12.0	0.3	0.0	chr19	893586	893894	(57723722)	C	AluSg	SINE/Alu	(0)	310	1	1797833
2187	10.1	0.0	0.3	chr19	2945533	2945829	(55671787)	+	AluSq	SINE/Alu	1	296	(17)	1801971
2394	8.1	0.0	0.0	chr19	4769906	4770200	(53847416)	C	AluSg	SINE/Alu	(15)	295	1	1806411
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
2032	6.9	6.5	0.7	chr19	12945235	12945509	(45672107)	+	AluSx1	SINE/Alu	1	292	(20)	1825593
14	18.2	2.6	2.5	chr19	14518366	14518404	(44099212)	+	(CCG)n	Simple_repeat	1	40	(0)	1829698
775	15.2	0.0	0.0	chr19	14518951	14519068	(44098548)	+	AluJo	SINE/Alu	1	118	(194)	1829700
2323	9.3	0.0	0.3	chr19	14519086	14519395	(44098221)	+	AluSz	SINE/Alu	1	309	(3)	1829701
2212	9.5	0.7	3.8	chr19	16077756	16078072	(42539544)	C	AluSx3	SINE/Alu	(4)	307	1	1833073
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
12	23.3	0.0	0.0	chr19	18292355	18292389	(40325227)	+	G-rich	Low_complexity	1	35	(0)	1838555
2272	10.4	0.0	0.0	chr19	18364332	18364620	(40252996)	+	AluSx1	SINE/Alu	1	289	(23)	1838730
2154	14.1	0.0	0.3	chr19	18365338	18365643	(40251973)	C	AluJb	SINE/Alu	(7)	305	1	1838731
210	27.2	18.6	3.5	chr19	18374237	18374324	(40243292)	+	MIRb	SINE/MIR	87	253	(15)	1838749
254	18.9	3.6	0.0	chr19	18374325	18374377	(40243239)	+	L2b	LINE/L2	3302	3356	(19)	1838750
364	27.8	6.5	0.9	chr19	18417204	18417319	(40200297)	+	L2c	LINE/L2	3260	3382	(5)	1838866
217	26.3	4.8	9.2	chr19	18417406	18417514	(40200102)	+	MIRc	SINE/MIR	23	126	(142)	1838867
299	28.3	8.9	4.2	chr19	41872376	41872493	(16745123)	+	MIRb	SINE/MIR	22	145	(123)	1874090
1645	18.3	0.3	3.0	chr19	47744950	47745250	(10872366)	+	AluJo	SINE/Alu	1	293	(19)	1886957
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
2643	4.0	0.0	0.0	chr19	49987701	49988001	(8629615)	C	AluY	SINE/Alu	(10)	301	1	1892353
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
195	32.9	1.4	0.0	chr19	55640488	55640557	(2977059)	+	MIRc	SINE/MIR	112	182	(86)	1904218
496	9.8	7.9	0.0	chr2	3571159	3571240	(238622289)	+	LTR9A1	LTR/ERV1	555	643	(85)	1914676
1468	26.2	9.0	5.3	chr2	3571243	3572058	(238621471)	+	L1MC4a	LINE/L1	5283	6004	(1878)	1914677
323	31.3	5.2	0.4	chr2	7009968	7010090	(235183439)	C	L2c	LINE/L2	(20)	3355	3224	1919299
291	32.6	5.0	2.9	chr2	7010214	7010349	(235183180)	C	MIR	SINE/MIR	(113)	149	11	1919300
395	35.1	11.2	0.0	chr2	7011433	7011623	(235181906)	+	MIRb	SINE/MIR	31	245	(23)	1919303
189	33.3	3.5	1.4	chr2	7191849	7191988	(235001541)	+	MIRb	SINE/MIR	3	145	(123)	1919563
1306	19.3	4.6	3.9	chr2	7192432	7192711	(235000818)	+	AluJr	SINE/Alu	1	282	(30)	1919564
285	22.7	2.7	11.3	chr2	7750154	7750277	(234443252)	+	MLT1K	LTR/ERVL-MaLR	468	580	(15)	1920368
647	21.7	7.3	0.6	chr2	7750350	7750516	(234443013)	+	MER3	DNA/hAT-Charlie	31	209	(0)	1920369
77	1.4	0.0	0.0	chr2	9193872	9193941	(232999588)	+	(TC)n	Simple_repeat	1	70	(0)	1922535
2278	10.2	1.3	0.3	chr2	9607703	9608007	(232585522)	C	AluSx3	SINE/Alu	(3)	308	1	1923281
1747	13.8	8.2	0.3	chr2	9656690	9656971	(232536558)	+	AluSz	SINE/Alu	1	306	(6)	1923376
823	24.3	10.6	0.0	chr2	10615035	10615244	(231578285)	C	UCON9	Unknown	(21)	302	68	1925067
354	35.2	1.6	1.6	chr2	11140605	11140731	(231052798)	C	L2c	LINE/L2	(1)	3386	3260	1926098
399	36.3	12.6	0.9	chr2	11140932	11141121	(231052408)	+	L2c	LINE/L2	2762	3015	(372)	1926099
205	29.3	1.7	0.0	chr2	17643180	17643237	(224550292)	+	L2b	LINE/L2	3312	3370	(5)	1936296
1806	17.3	7.8	1.1	chr2	18626929	18627297	(223566232)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1937728
277	33.0	2.5	9.2	chr2	18627427	18627523	(223566006)	C	L2c	LINE/L2	(3)	3384	3297	1937729
352	35.9	8.7	2.1	chr2	18627524	18627758	(223565771)	+	MIRc	SINE/MIR	1	262	(6)	1937730
18	17.8	0.0	4.2	chr2	18650578	18650625	(223542904)	+	A-rich	Low_complexity	1	48	(0)	1937756
247	35.8	1.1	2.8	chr2	18722862	18723039	(223470490)	C	L1ME4a	LINE/L1	(200)	5924	5750	1937847
2072	18.5	3.2	2.9	chr2	18723492	18724163	(223469366)	+	L1MB3	LINE/L1	5545	6176	(7)	1937848
207	30.5	13.0	4.1	chr2	20650390	20650683	(221542846)	+	L2b	LINE/L2	3031	3354	(21)	1940693
208	21.2	4.0	3.1	chr2	20650799	20650882	(221542647)	+	MIRc	SINE/MIR	90	179	(89)	1940694
14	10.3	3.0	2.9	chr2	20651130	20651162	(221542367)	+	(CCCTG)n	Simple_repeat	1	34	(0)	1940695
474	26.2	1.2	1.2	chr2	24404606	24404752	(217788777)	+	MLT1I	LTR/ERVL-MaLR	71	255	(257)	1946051
279	29.0	1.6	0.0	chr2	26139610	26139707	(216053822)	C	MIR	SINE/MIR	(151)	117	15	1949407
2284	12.0	0.3	0.0	chr2	26749485	26749793	(215443736)	+	AluSx	SINE/Alu	1	310	(2)	1950530
455	25.4	9.1	15.1	chr2	26749794	26749864	(215443665)	C	L1MC5a	LINE/L1	(96)	2681	2635	1950529
6908	10.5	0.5	4.4	chr2	26749865	26750871	(215442658)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1950531
2973	16.1	6.9	0.8	chr2	26757784	26758302	(215435227)	C	MER41A	LTR/ERV1	(0)	554	2	1950548
228	25.9	8.4	0.0	chr2	26758485	26758586	(215434943)	+	L2c	LINE/L2	3026	3139	(248)	1950549
15	8.4	0.0	6.9	chr2	27381081	27381120	(214812409)	+	(AC)n	Simple_repeat	1	37	(0)	1951699
261	22.7	2.6	2.6	chr2	27627986	27628062	(214565467)	C	L2a	LINE/L2	(1)	3425	3349	1952144
559	18.9	7.0	2.2	chr2	27628104	27628238	(214565291)	C	MIRb	SINE/MIR	(84)	184	43	1952145
1384	17.7	14.1	4.0	chr2	27683331	27683678	(214509851)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	1	1952256
1741	10.8	1.9	1.6	chr2	27683736	27683993	(214509536)	C	AluSx3	SINE/Alu	(10)	301	43	1952257
299	18.6	0.0	0.0	chr2	27715224	27715282	(214478247)	+	Charlie4z	DNA/hAT-Charlie	94	152	(15)	1952333
3009	21.7	12.9	1.2	chr2	27793099	27794008	(214399521)	+	L1MC4	LINE/L1	7043	8042	(0)	1952505
191	31.2	13.9	2.1	chr2	27798775	27798869	(214394660)	+	L2c	LINE/L2	3031	3138	(249)	1952513
339	28.8	12.4	1.2	chr2	28663916	28664060	(213529469)	C	L2a	LINE/L2	(5)	3421	3215	1953953
1923	16.4	16.6	4.6	chr2	28664230	28664729	(213528800)	+	LTR18B	LTR/ERVL	1	572	(42)	1953954
316	28.4	2.4	2.8	chr2	30300713	30300890	(211892639)	+	L1ME3Cz	LINE/L1	5702	5881	(2001)	1956725
181	27.7	2.1	0.0	chr2	33023679	33023725	(209169804)	C	L2c	LINE/L2	(47)	3340	3293	1961365
1028	24.9	11.0	5.9	chr2	33024073	33024477	(209169052)	C	L2a	LINE/L2	(2)	3424	2997	1961366
201	21.9	0.0	0.0	chr2	33529782	33529822	(208663707)	+	MIR3	SINE/MIR	162	202	(6)	1962112
375	27.1	16.4	5.7	chr2	37654188	37654539	(204538990)	+	L3	LINE/CR1	3544	3940	(159)	1968049
437	24.4	7.1	3.1	chr2	37916554	37916714	(204276815)	+	MIRc	SINE/MIR	86	253	(15)	1968463
4689	10.3	2.2	0.2	chr2	37917446	37918066	(204275463)	C	MER41B	LTR/ERV1	(0)	634	1	1968465
4212	8.2	0.6	1.6	chr2	39468180	39468739	(202724790)	+	MER41A	LTR/ERV1	1	554	(0)	1971259
493	28.1	1.4	2.7	chr2	39996650	39996799	(202196730)	+	MIRb	SINE/MIR	75	222	(46)	1972015
2569	18.2	3.8	1.0	chr2	39996800	39997315	(202196214)	+	MER44B	DNA/TcMar-Tigger	20	550	(0)	1972016
493	31.3	4.3	0.4	chr2	40094976	40095219	(202098310)	+	MIR	SINE/MIR	1	254	(8)	1972132
1958	17.2	4.9	5.3	chr2	40095298	40095765	(202097764)	C	MER31B	LTR/ERV1	(0)	466	1	1972133
413	29.4	14.6	1.4	chr2	40285118	40285265	(201908264)	C	MIRb	SINE/MIR	(81)	187	17	1972343
465	36.3	12.2	2.3	chr2	42421189	42421453	(199772076)	C	L2b	LINE/L2	(0)	3375	3081	1975521
17	15.8	8.2	0.0	chr2	42421484	42421533	(199771996)	+	(TTTA)n	Simple_repeat	1	54	(0)	1975522
17	4.3	4.2	0.0	chr2	43076014	43076037	(199117492)	+	(CT)n	Simple_repeat	1	25	(0)	1976823
20	13.9	0.0	0.0	chr2	43399873	43399904	(198793625)	+	(A)n	Simple_repeat	1	32	(0)	1977426
292	8.9	0.0	2.2	chr2	43491347	43491392	(198702137)	C	MADE1	DNA/TcMar-Mariner	(0)	80	36	1977580
1664	18.9	3.5	4.6	chr2	43491459	43491807	(198701722)	+	Tigger3a	DNA/TcMar-Tigger	3	347	(1)	1977581
16	14.9	7.9	0.0	chr2	44680816	44680853	(197512676)	+	GA-rich	Low_complexity	1	41	(0)	1979598
351	18.4	18.1	3.5	chr2	46481336	46481454	(195712075)	+	MIRb	SINE/MIR	123	257	(5)	1982323
785	24.5	8.6	2.3	chr2	46481472	46481688	(195711841)	+	MIRb	SINE/MIR	37	268	(0)	1982324
231	25.8	1.5	0.0	chr2	46481693	46481758	(195711771)	C	L3	LINE/CR1	(713)	3386	3320	1982322
580	29.1	7.0	0.0	chr2	46481770	46481941	(195711588)	C	L3	LINE/CR1	(847)	3252	3068	1982322
240	33.3	4.2	4.2	chr2	46481942	46482132	(195711397)	C	CR1-3_Croc	LINE/CR1	(1589)	2016	1826	1982325
2347	11.2	0.0	0.0	chr2	46492984	46493288	(195700241)	+	AluSx	SINE/Alu	3	307	(5)	1982342
597	27.2	13.5	2.8	chr2	46493306	46493596	(195699933)	C	MER102a	DNA/hAT-Charlie	(3)	327	1	1982343
4595	9.4	0.8	0.5	chr2	46753518	46754147	(195439382)	C	MER41B	LTR/ERV1	(0)	634	3	1982754
1459	26.1	10.8	2.3	chr2	46754148	46754580	(195438949)	C	Tigger13a	DNA/TcMar-Tigger	(164)	607	131	1982753
16	25.5	0.0	0.0	chr2	46873906	46873940	(195319589)	+	(TG)n	Simple_repeat	1	35	(0)	1982971
1942	15.1	3.2	0.0	chr2	46875591	46875888	(195317641)	+	AluSz6	SINE/Alu	1	308	(4)	1982975
1129	17.1	3.8	1.0	chr2	46875889	46876287	(195317242)	C	LTR54	LTR/ERV1	(8)	502	1	1982976
231	31.6	4.2	11.7	chr2	46955061	46955239	(195238290)	C	MIRc	SINE/MIR	(0)	268	104	1983143
222	37.2	7.4	2.1	chr2	55886103	55886242	(186307287)	+	MIRc	SINE/MIR	3	150	(118)	1996721
350	30.3	4.7	1.4	chr2	58147179	58147322	(184046207)	C	L4_C_Mam	LINE/RTE-X	(180)	4958	4810	1999411
311	36.2	9.7	1.5	chr2	60516600	60517135	(181676394)	+	Plat_L3	LINE/CR1	2809	3393	(193)	2002542
512	28.0	12.5	2.2	chr2	67256858	67257036	(174936493)	+	MIR3	SINE/MIR	7	206	(2)	2013824
2485	7.1	0.0	0.0	chr2	67257283	67257579	(174935950)	C	AluY	SINE/Alu	(4)	307	11	2013825
245	20.6	0.0	10.0	chr2	68027881	68027950	(174165579)	C	L2c	LINE/L2	(0)	3387	3325	2014926
236	30.8	5.5	4.8	chr2	72205195	72205320	(169988209)	+	L3	LINE/CR1	3934	4060	(39)	2021716
203	26.5	5.6	1.4	chr2	72757097	72757165	(169436364)	+	MIR	SINE/MIR	186	257	(5)	2022506
704	27.4	5.8	10.3	chr2	72757258	72757724	(169435805)	+	MER65D	LTR/ERV1	1	473	(0)	2022507
184	28.6	14.4	0.8	chr2	73737577	73737696	(168455833)	+	MIR3	SINE/MIR	30	168	(40)	2024107
2072	8.9	0.4	0.0	chr2	73737719	73737987	(168455542)	C	AluY	SINE/Alu	(16)	295	26	2024108
685	13.6	5.7	2.2	chr2	73738001	73738129	(168455400)	+	MST-int	LTR/ERVL-MaLR	1510	1645	(6)	2024109
245	27.9	1.4	0.0	chr2	74597599	74597666	(167595863)	+	Plat_L3	LINE/CR1	2242	2310	(1276)	2025637
345	28.1	8.8	2.2	chr2	74597675	74597812	(167595717)	+	L3	LINE/CR1	2989	3136	(963)	2025638
19	24.0	3.9	2.5	chr2	85437616	85437692	(156755837)	+	G-rich	Low_complexity	1	80	(0)	2040751
447	26.3	20.3	0.8	chr2	85504654	85504887	(156688642)	+	L2a	LINE/L2	3136	3426	(0)	2040921
200	34.3	2.7	1.8	chr2	85504952	85505061	(156688468)	+	MIR3	SINE/MIR	92	202	(6)	2040923
1116	19.1	2.1	0.0	chr2	85505267	85505454	(156688075)	+	AluJb	SINE/Alu	121	312	(0)	2040924
488	25.9	5.5	0.0	chr2	85735497	85735635	(156457894)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	462	2041403
406	27.0	15.3	6.1	chr2	85735778	85736006	(156457523)	C	MLT1L	LTR/ERVL-MaLR	(336)	274	21	2041403
1692	18.2	5.9	0.0	chr2	85737286	85737456	(156456073)	C	AluJo	SINE/Alu	(8)	304	134	2041407
31	0.0	0.0	2.9	chr2	85737457	85737490	(156456039)	+	(TTTAT)n	Simple_repeat	1	34	(0)	2041408
1692	18.2	5.9	0.0	chr2	85737491	85737603	(156455926)	C	AluJo	SINE/Alu	(192)	120	2	2041407
246	16.9	6.1	7.2	chr2	85737671	85737753	(156455776)	+	MLT1L	LTR/ERVL-MaLR	151	232	(378)	2041409
536	25.2	6.0	3.7	chr2	85737850	85738062	(156455467)	+	MLT1L	LTR/ERVL-MaLR	288	596	(14)	2041409
14	17.9	5.1	0.0	chr2	85742070	85742108	(156451421)	+	(CACACG)n	Simple_repeat	1	41	(0)	2041417
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
229	31.8	10.2	0.0	chr2	100291934	100292021	(141901508)	C	MIRb	SINE/MIR	(137)	131	34	2057669
249	32.5	3.5	1.2	chr2	100767307	100767390	(141426139)	C	L2b	LINE/L2	(0)	3375	3290	2058482
18	26.3	0.0	0.0	chr2	102227797	102227847	(139965682)	+	(TCTC)n	Simple_repeat	1	51	(0)	2060808
2438	9.6	0.0	0.0	chr2	108072672	108072972	(134120557)	C	AluSg	SINE/Alu	(9)	301	1	2068767
408	18.8	0.0	3.4	chr2	117981206	117981293	(124212236)	+	L2a	LINE/L2	3341	3425	(1)	2082987
249	18.4	3.9	0.0	chr2	117984343	117984391	(124209138)	+	MER4CL34	LTR/ERV1	58	108	(657)	2082994
2763	4.4	0.0	0.0	chr2	121531314	121531609	(120661920)	+	AluYe5	SINE/Alu	1	296	(14)	2088813
2413	6.9	0.0	0.0	chr2	121531612	121531887	(120661642)	+	AluSc	SINE/Alu	25	300	(9)	2088814
1187	12.3	6.2	0.5	chr2	128069841	128070036	(114123493)	C	LTR47B2	LTR/ERVL	(226)	208	1	2098601
2446	31.3	11.2	5.4	chr2	128070040	128070420	(114123109)	+	ERVL-E-int	LTR/ERVL	1866	2450	(3264)	2098595
2473	5.5	0.0	0.3	chr2	128070421	128070711	(114122818)	+	AluY	SINE/Alu	2	291	(20)	2098602
467	30.2	0.0	1.6	chr2	138023535	138023662	(104169867)	+	MER131	DNA?	2	127	(88)	2112870
842	30.8	3.1	2.0	chr2	141492992	141493246	(100700283)	C	MIRb	SINE/MIR	(2)	266	9	2117539
322	30.8	9.1	4.5	chr2	142188422	142188598	(100004931)	+	L2c	LINE/L2	3182	3367	(20)	2118466
1189	18.6	13.5	4.5	chr2	142188628	142189076	(100004453)	+	LTR54B	LTR/ERV1	1	496	(2)	2118467
340	30.6	10.8	1.1	chr2	144596030	144596204	(97597325)	+	UCON25	Unknown	51	244	(31)	2121622
40	4.8	0.0	0.0	chr2	150624338	150624380	(91569149)	+	(AC)n	Simple_repeat	1	43	(0)	2129639
892	21.5	0.4	9.7	chr2	150624876	150625122	(91568407)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	2129640
2486	7.9	0.3	0.0	chr2	151374844	151375146	(90818383)	+	AluSp	SINE/Alu	1	304	(9)	2130770
601	29.3	9.8	2.6	chr2	157174261	157174562	(85018967)	C	MER102b	DNA/hAT-Charlie	(9)	332	7	2138383
1211	21.4	15.1	1.6	chr2	157247137	157247564	(84945965)	+	LTR54B	LTR/ERV1	1	496	(2)	2138482
833	18.2	0.0	8.3	chr2	159052464	159052631	(83140898)	+	MSTD	LTR/ERVL-MaLR	243	396	(0)	2141041
4432	10.8	5.4	2.7	chr2	164541939	164543010	(77650519)	+	L1PA16	LINE/L1	4651	5778	(388)	2148417
348	31.2	3.5	5.9	chr2	164963654	164963827	(77229702)	+	LTR91	LTR/ERVL	1	171	(28)	2149038
4146	7.4	2.0	0.0	chr2	164963828	164964370	(77229159)	+	MER41A	LTR/ERV1	1	554	(0)	2149039
577	13.7	16.4	0.0	chr2	166568639	166568755	(75624774)	+	L1MB4	LINE/L1	6041	6180	(0)	2151194
4472	19.6	3.3	4.2	chr2	166653012	166654933	(75538596)	C	L1MA8	LINE/L1	(22)	6290	4384	2151269
3897	10.5	1.9	0.4	chr2	167335392	167335947	(74857582)	C	MER41B	LTR/ERV1	(69)	565	1	2152075
1909	12.1	4.4	2.1	chr2	173184627	173184916	(69008613)	+	AluSz6	SINE/Alu	1	297	(15)	2161261
2303	10.8	0.3	0.0	chr2	173184960	173185255	(69008274)	+	AluSx	SINE/Alu	1	297	(15)	2161262
201	28.4	15.2	0.0	chr2	173658690	173658784	(68534745)	C	MIRb	SINE/MIR	(155)	113	2	2161982
20	4.3	0.0	0.0	chr2	173659226	173659249	(68534280)	+	(T)n	Simple_repeat	1	24	(0)	2161983
262	33.3	6.6	5.4	chr2	176399082	176399230	(65794299)	C	MIR1_Amn	SINE/MIR	(79)	151	1	2166070
259	26.2	6.3	1.3	chr2	176399370	176399520	(65794009)	+	MamRep434	DNA/TcMar-Tigger	210	368	(58)	2166071
2530	9.6	0.0	0.0	chr2	179459822	179460133	(62733396)	+	AluSx	SINE/Alu	1	312	(0)	2170204
340	31.7	15.2	3.8	chr2	179460159	179460226	(62733303)	C	L2a	LINE/L2	(193)	3194	3130	2170200
4593	14.0	6.0	0.5	chr2	179460227	179461001	(62732528)	+	LTR8B	LTR/ERV1	1	820	(0)	2170205
6318	18.6	3.1	0.5	chr2	180039653	180041697	(62151832)	C	L1MB8	LINE/L1	(5)	6173	4069	2170983
3213	15.4	2.5	2.8	chr2	181036367	181036973	(61156556)	+	MER6A	DNA/TcMar-Tigger	1	605	(0)	2172226
1956	24.4	8.6	3.4	chr2	181036974	181037007	(61156522)	+	L1ME1	LINE/L1	4948	4975	(1171)	2172225
5921	14.0	7.5	3.9	chr2	181037008	181037698	(61155831)	+	Tigger3b	DNA/TcMar-Tigger	2	734	(497)	2172227
480	34.3	11.5	4.7	chr2	182066132	182066623	(60126906)	C	L3	LINE/CR1	(626)	3473	2944	2173476
54	3.7	0.0	0.0	chr2	182066941	182066995	(60126534)	+	(TG)n	Simple_repeat	1	55	(0)	2173478
5022	21.9	7.2	3.9	chr2	187335490	187337021	(54856508)	+	LTR37-int	LTR/ERV1	30	1616	(2444)	2180264
497	28.0	0.9	0.0	chr2	188811383	188811489	(53382040)	+	MLT1N2	LTR/ERVL-MaLR	112	219	(343)	2182075
761	31.8	4.1	3.4	chr2	198072168	198072860	(44120669)	C	L1ME3Cz	LINE/L1	(1693)	4453	3765	2194993
314	29.8	10.8	0.7	chr2	198072933	198073074	(44120455)	C	MIRc	SINE/MIR	(39)	229	72	2194995
519	34.4	6.2	7.5	chr2	200429869	200430214	(41763315)	+	L2c	LINE/L2	3018	3362	(25)	2198325
353	26.7	13.8	9.9	chr2	200479203	200479568	(41713961)	C	MLT1K	LTR/ERVL-MaLR	(155)	440	69	2198395
4841	2.5	0.2	0.2	chr2	201126038	201126595	(41066934)	C	LTR6B	LTR/ERV1	(0)	558	1	2199587
480	27.2	16.2	1.4	chr2	201126596	201126815	(41066714)	+	LTR67B	LTR/ERVL	338	596	(24)	2199588
300	31.4	12.2	2.1	chr2	201890207	201890398	(40303131)	+	L2c	LINE/L2	2910	3123	(264)	2200778
1006	27.3	5.8	5.6	chr2	202141973	202142488	(40051041)	+	L1ME4c	LINE/L1	1	517	(313)	2201289
2083	13.5	0.0	0.7	chr2	202142489	202142794	(40050735)	C	LTR8	LTR/ERV1	(387)	304	1	2201290
1040	17.2	8.4	0.0	chr2	202142884	202143069	(40050460)	C	MER20	DNA/hAT-Charlie	(16)	203	1	2201291
2197	13.2	0.0	0.3	chr2	202143076	202143385	(40050144)	C	AluSx	SINE/Alu	(3)	309	1	2201292
251	27.9	5.0	5.0	chr2	203811620	203811800	(38381729)	C	L2	LINE/L2	(2409)	1010	830	2204694
625	28.6	5.8	2.0	chr2	207437079	207437378	(34756151)	+	UCON28a	Unknown	406	717	(90)	2210005
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
2529	6.4	0.0	1.0	chr2	209901645	209901942	(32291587)	+	AluY	SINE/Alu	1	295	(16)	2213628
15123	13.1	1.4	1.7	chr2	209901943	209902897	(32290632)	+	Tigger1	DNA/TcMar-Tigger	1472	2418	(0)	2213627
237	27.6	8.4	0.0	chr2	213222223	213222298	(28971231)	C	L2	LINE/L2	(991)	2428	2346	2217975
240	26.6	6.9	6.3	chr2	214019792	214019938	(28173591)	C	L2b	LINE/L2	(16)	3410	3223	2219016
1053	26.2	2.9	1.5	chr2	215700270	215700610	(26492919)	+	L1MEf	LINE/L1	469	814	(5386)	2221501
530	31.1	6.7	3.0	chr2	218908586	218908787	(23284742)	+	MIRb	SINE/MIR	35	244	(24)	2227016
725	30.0	3.1	6.1	chr2	220499568	220499830	(21693699)	+	MIR	SINE/MIR	8	262	(0)	2229621
423	19.4	5.1	0.0	chr2	223696754	223696846	(18496683)	C	MER5B	DNA/hAT-Charlie	(76)	102	5	2234666
23	21.6	0.0	0.0	chr2	229453908	229453968	(12739561)	+	A-rich	Low_complexity	1	61	(0)	2243560
340	27.3	1.0	0.0	chr2	229454031	229454129	(12739400)	+	MLT1H	LTR/ERVL-MaLR	250	349	(200)	2243561
420	20.4	2.6	5.8	chr2	229454146	229454265	(12739264)	+	MLT1H	LTR/ERVL-MaLR	432	547	(2)	2243561
210	35.8	1.0	0.0	chr2	229572939	229573031	(12620498)	+	L2a	LINE/L2	3270	3416	(10)	2243749
37	20.0	4.1	0.0	chr2	231604662	231604758	(10588771)	+	(CCGGC)n	Simple_repeat	1	101	(0)	2247244
538	31.5	7.9	4.9	chr2	231882910	231883423	(10310106)	C	L1M5	LINE/L1	(1478)	4668	4138	2247831
334	23.1	3.4	14.4	chr2	231883484	231883723	(10309806)	+	L1MB3	LINE/L1	2922	3134	(3012)	2247826
1837	13.6	3.2	0.0	chr2	234336217	234336488	(7857041)	+	AluSx1	SINE/Alu	5	285	(27)	2251787
210	28.9	8.2	4.3	chr2	237282298	237282391	(4911138)	C	MIRb	SINE/MIR	(135)	133	36	2256171
350	26.2	12.2	1.3	chr2	237282402	237282537	(4910992)	+	L2a	LINE/L2	3226	3421	(5)	2256172
91	15.5	3.6	6.9	chr2	237282543	237282822	(4910707)	+	GA-rich	Low_complexity	1	290	(0)	2256173
653	32.8	9.4	2.2	chr2	237500528	237501060	(4692469)	+	L2b	LINE/L2	2319	2893	(526)	2256442
184	26.4	13.3	0.0	chr2	237501129	237501219	(4692310)	+	L2b	LINE/L2	3222	3326	(49)	2256442
295	25.6	3.3	0.4	chr2	237501280	237501380	(4692149)	C	MIR	SINE/MIR	(56)	212	112	2256444
1805	8.8	0.4	8.1	chr2	237501545	237501817	(4691712)	+	AluSx1	SINE/Alu	1	252	(60)	2256445
1411	8.2	0.0	0.0	chr2	238635396	238635579	(3557950)	C	L1PA14	LINE/L1	(1)	6160	5977	2258060
722	28.0	21.6	1.9	chr2	241935262	241935851	(257678)	+	L1M4	LINE/L1	4344	5081	(1065)	2261868
214	28.1	11.1	0.0	chr20	8067161	8067224	(56376943)	C	MIR	SINE/MIR	(102)	160	89	2276721
346	27.2	3.6	11.4	chr20	8527874	8528118	(55916049)	+	L1ME4c	LINE/L1	372	596	(234)	2277412
1724	21.0	7.0	5.3	chr20	8528100	8528551	(55915616)	+	L1ME2	LINE/L1	5548	6007	(157)	2277413
1808	10.6	2.5	0.7	chr20	9025818	9026094	(55418073)	+	LTR8	LTR/ERV1	1	282	(409)	2278256
893	28.5	6.2	3.0	chr20	9984815	9985248	(54458919)	C	HAL1ME	LINE/L1	(144)	2321	1873	2279790
503	34.4	9.4	0.7	chr20	9985454	9985734	(54458433)	C	HAL1	LINE/L1	(592)	1915	1608	2279788
2247	17.8	7.3	2.6	chr20	10308581	10308662	(54135505)	C	L1MB7	LINE/L1	(453)	5731	5651	2280314
70	36.1	0.3	1.6	chr20	10308694	10308999	(54135168)	+	(CCA)n	Simple_repeat	1	307	(0)	2280317
182	33.1	8.8	2.0	chr20	11207998	11208145	(53236022)	+	MIRc	SINE/MIR	3	161	(107)	2281666
326	31.8	6.3	2.0	chr20	11208368	11208518	(53235649)	C	MIR3	SINE/MIR	(14)	194	37	2281667
369	32.3	7.8	6.4	chr20	31544014	31544215	(32899952)	C	MIR	SINE/MIR	(28)	234	30	2306227
1632	16.1	14.1	2.4	chr20	31571459	31571673	(32872494)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	178	2306290
1695	12.7	6.9	2.8	chr20	31573504	31573794	(32870373)	C	AluJb	SINE/Alu	(3)	309	6	2306296
264	29.7	1.0	2.9	chr20	31573799	31573902	(32870265)	+	MIR	SINE/MIR	65	166	(96)	2306297
264	28.1	5.8	0.0	chr20	31573918	31573999	(32870168)	+	L2a	LINE/L2	3338	3424	(2)	2306298
276	29.3	10.5	1.9	chr20	31574067	31574224	(32869943)	+	MIRc	SINE/MIR	61	252	(10)	2306299
195	30.2	5.5	2.3	chr20	31606870	31606957	(32837210)	C	MIR3	SINE/MIR	(50)	158	68	2306393
226	29.5	0.0	0.0	chr20	31607784	31607844	(32836323)	C	MIR3	SINE/MIR	(57)	151	91	2306394
215	20.3	8.6	1.5	chr20	31607962	31608026	(32836141)	C	MIRc	SINE/MIR	(87)	181	112	2306395
1880	10.8	5.8	0.7	chr20	31609981	31610258	(32833909)	C	AluSq2	SINE/Alu	(19)	294	2	2306402
2270	8.5	0.0	0.0	chr20	31610261	31610567	(32833600)	C	AluSx	SINE/Alu	(0)	312	1	2306403
734	28.0	5.8	3.6	chr20	31699637	31699888	(32744279)	+	MIRb	SINE/MIR	10	267	(1)	2306663
12	18.6	2.1	6.1	chr20	31968324	31968371	(32475796)	+	(CGCGCTG)n	Simple_repeat	1	49	(0)	2307305
1056	21.7	8.0	0.7	chr20	33909269	33909546	(30534621)	C	L1ME1	LINE/L1	(51)	6128	5829	2311888
643	25.3	8.6	5.3	chr20	33909557	33909936	(30534231)	+	MER65D	LTR/ERV1	1	435	(38)	2311889
2018	12.0	0.4	0.0	chr20	34389872	34390138	(30054029)	+	AluSx1	SINE/Alu	34	301	(11)	2312991
1907	14.8	3.0	4.5	chr20	34390139	34390205	(30053962)	C	LTR47A2	LTR/ERVL	(370)	62	1	2312990
432	31.2	6.0	0.7	chr20	34390264	34390405	(30053762)	C	MIR	SINE/MIR	(112)	150	1	2312992
8347	2.3	0.0	0.0	chr20	35262124	35263091	(29181076)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2314904
300	32.0	9.1	9.3	chr20	35263265	35263726	(29180441)	+	L2b	LINE/L2	2924	3384	(3)	2314905
521	30.7	8.2	0.0	chr20	35318191	35318369	(29125798)	C	MIR3	SINE/MIR	(10)	198	4	2315001
2623	4.1	0.0	2.8	chr20	36383694	36384013	(28060154)	+	AluYk3	SINE/Alu	1	311	(0)	2317490
522	25.7	0.7	1.4	chr20	36384407	36384548	(28059619)	C	MIR	SINE/MIR	(26)	236	96	2317491
184	31.4	9.5	0.0	chr20	38108926	38109011	(26335156)	+	MIR1_Amn	SINE/MIR	16	110	(120)	2321399
405	28.9	4.9	1.9	chr20	38109137	38109295	(26334872)	+	MIR	SINE/MIR	31	194	(68)	2321400
225	22.0	18.0	4.2	chr20	38110465	38110559	(26333608)	+	L3	LINE/CR1	3922	4032	(67)	2321401
598	25.0	9.9	4.2	chr20	38110574	38110811	(26333356)	C	MER102a	DNA/hAT-Charlie	(1)	329	77	2321402
926	26.2	2.9	3.6	chr20	38122958	38123234	(26320933)	C	Arthur1C	DNA/hAT-Tip100	(88)	275	1	2321436
277	31.8	3.8	4.3	chr20	38123518	38123678	(26320489)	+	MIR	SINE/MIR	2	161	(101)	2321437
465	27.1	15.9	2.0	chr20	38125156	38125404	(26318763)	C	L1ME3A	LINE/L1	(0)	6173	5884	2321444
1174	21.3	4.5	1.1	chr20	38151984	38152244	(26291923)	C	ORSL	DNA/hAT-Tip100	(2)	273	4	2321500
2421	9.1	0.0	0.0	chr20	38153243	38153549	(26290618)	+	AluSx	SINE/Alu	1	307	(5)	2321501
289	32.6	1.9	0.3	chr20	38153551	38153687	(26290480)	+	L1ME3G	LINE/L1	563	704	(2073)	2321502
4293	12.9	0.3	0.5	chr20	40948257	40948880	(23495287)	C	MER41B	LTR/ERV1	(9)	625	3	2326752
489	23.4	10.2	8.1	chr20	40949064	40949323	(23494844)	C	MamRep434	DNA/TcMar-Tigger	(113)	313	48	2326753
16	26.6	2.0	1.9	chr20	43458260	43458310	(20985857)	+	(GC)n	Simple_repeat	1	52	(0)	2331218
3952	11.0	0.6	0.0	chr20	43781962	43782499	(20661668)	C	MER41B	LTR/ERV1	(86)	548	8	2331981
2435	8.8	0.3	0.0	chr20	43782518	43782823	(20661344)	C	AluSp	SINE/Alu	(6)	307	1	2331982
1404	13.4	0.0	0.0	chr20	43782825	43783025	(20661142)	C	MER41-int	LTR/ERV1	(17)	5929	5729	2331981
283	30.0	10.1	2.1	chr20	45020063	45020246	(19423921)	+	MIR	SINE/MIR	24	239	(29)	2334866
3459	16.3	4.2	7.2	chr20	47123995	47124374	(17319793)	C	LTR62	LTR/ERVL	(328)	381	1	2339270
663	19.3	0.0	0.0	chr20	47124641	47124754	(17319413)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2339272
4551	11.9	0.6	0.3	chr20	48139141	48139772	(16304395)	C	MER41B	LTR/ERV1	(0)	634	1	2341528
224	38.8	8.8	3.9	chr20	48139773	48139983	(16304184)	C	L2c	LINE/L2	(146)	3241	3020	2341527
342	27.4	16.2	1.7	chr20	48140002	48140274	(16303893)	+	L2c	LINE/L2	2833	3161	(265)	2341529
1859	15.5	1.7	1.0	chr20	50034098	50034388	(14409779)	C	AluJr	SINE/Alu	(19)	293	1	2345910
27	0.0	0.0	0.0	chr20	50034406	50034431	(14409736)	+	(T)n	Simple_repeat	1	26	(0)	2345911
763	15.7	0.0	0.0	chr20	50034432	50034546	(14409621)	C	AluJo	SINE/Alu	(195)	117	3	2345912
188	23.2	3.5	0.0	chr20	50034688	50034743	(14409424)	+	MIR	SINE/MIR	75	132	(130)	2345913
2293	10.9	0.0	0.0	chr20	50638960	50639253	(13804914)	+	AluSz	SINE/Alu	1	294	(18)	2347346
2136	13.9	0.3	0.3	chr20	50762404	50762704	(13681463)	C	AluJo	SINE/Alu	(11)	301	1	2347655
35	0.0	0.0	0.0	chr20	50762752	50762781	(13681386)	+	(AC)n	Simple_repeat	1	30	(0)	2347656
1823	15.6	4.0	0.7	chr20	51351205	51351493	(13092674)	C	AluSz	SINE/Alu	(13)	299	1	2348969
766	21.8	9.4	0.0	chr20	51351495	51351687	(13092480)	C	MER58A	DNA/hAT-Charlie	(9)	215	3	2348970
327	26.7	10.7	6.1	chr20	51351824	51351957	(13092210)	C	L2b	LINE/L2	(212)	3163	3024	2348971
2001	13.6	0.7	0.0	chr20	51351958	51352237	(13091930)	+	AluSx	SINE/Alu	2	283	(29)	2348972
2160	12.1	0.7	0.0	chr20	51630422	51630710	(12813457)	+	AluSq2	SINE/Alu	2	292	(21)	2349529
2260	14.5	3.0	10.4	chr20	51630711	51631151	(12813016)	+	LTR47B2	LTR/ERVL	26	434	(0)	2349528
2045	14.1	2.9	0.0	chr20	56373669	56373966	(8070201)	+	AluJo	SINE/Alu	1	307	(5)	2358900
41	0.0	0.0	0.0	chr20	56374017	56374051	(8070116)	+	(AC)n	Simple_repeat	1	35	(0)	2358901
236	5.7	5.4	0.0	chr20	56374193	56374227	(8069940)	C	HSMAR1	DNA/TcMar-Mariner	(1250)	37	1	2358902
1493	21.5	10.3	7.7	chr21	15993828	15994527	(30715456)	+	Arthur1	DNA/hAT-Tip100	2888	3607	(340)	2379869
485	21.2	6.6	6.1	chr21	15994522	15994636	(30715347)	+	Arthur1B	DNA/hAT-Tip100	1036	1152	(73)	2379870
191	40.0	1.6	4.0	chr21	25126945	25127069	(21582914)	C	MamSINE1	SINE/tRNA-RTE	(0)	290	169	2392083
272	35.2	3.9	3.2	chr21	26587731	26587856	(20122127)	+	L2b	LINE/L2	3249	3375	(0)	2394218
808	34.4	5.3	0.7	chr21	26588125	26588540	(20121443)	+	MLT1M	LTR/ERVL-MaLR	4	439	(233)	2394223
2127	11.2	4.7	2.7	chr21	26834994	26835351	(19874632)	+	THE1B	LTR/ERVL-MaLR	1	423	(3)	2394577
2641	25.9	7.2	4.1	chr21	27363713	27364858	(19345125)	C	L1ME1	LINE/L1	(17)	6162	4996	2395313
291	37.5	3.8	4.1	chr21	29656797	29657103	(17052880)	+	X6B_LINE	LINE/CR1	759	1065	(7)	2398649
334	36.5	5.9	3.1	chr21	29704862	29705090	(17004893)	C	AmnSINE2	SINE/tRNA-Deu	(76)	282	47	2398725
614	30.0	5.9	0.4	chr21	29705277	29705517	(17004466)	C	MER103C	DNA/hAT-Charlie	(36)	261	7	2398726
1563	21.7	9.6	1.1	chr21	38441208	38441570	(8268413)	+	MLT2C1	LTR/ERVL	1	397	(0)	2413028
428	34.1	4.3	1.1	chr21	38755372	38755552	(7954431)	+	MIRc	SINE/MIR	79	265	(3)	2413453
3898	11.0	0.7	0.6	chr21	46518871	46519419	(190564)	C	MER41B	LTR/ERV1	(84)	550	1	2424092
3263	10.1	3.1	2.3	chr21	46519420	46519855	(190128)	C	MER41-int	LTR/ERV1	(0)	5946	5505	2424092
317	33.1	2.8	3.9	chr22	30208927	30209108	(20609360)	C	MIR3	SINE/MIR	(11)	197	18	2452140
570	23.3	0.0	13.3	chr22	30209574	30209746	(20608722)	C	MIRb	SINE/MIR	(82)	186	37	2452141
4370	11.3	1.3	2.2	chr22	37195469	37196108	(13622360)	C	MER41B	LTR/ERV1	(0)	634	1	2466694
246	31.7	1.8	3.9	chr22	37752225	37752394	(13066074)	+	MIR	SINE/MIR	87	248	(14)	2467980
12	22.4	0.0	2.6	chr22	46007721	46007758	(4810710)	+	(CTGAGG)n	Simple_repeat	1	38	(0)	2484865
4666	9.6	1.3	0.0	chr3	2356131	2356756	(195938803)	C	MER41B	LTR/ERV1	(0)	634	1	2495719
321	30.3	6.6	1.3	chr3	10205723	10205879	(188089680)	+	MER113A	DNA/hAT-Charlie	141	306	(8)	2508918
446	28.4	16.7	4.0	chr3	10206000	10206395	(188089164)	C	LTR16B2	LTR/ERVL	(4)	458	3	2508919
231	37.3	5.3	0.0	chr3	11466526	11466651	(186828908)	+	MIRc	SINE/MIR	3	135	(133)	2511517
253	30.2	8.1	2.4	chr3	14210991	14211155	(184084404)	+	MIR1_Amn	SINE/MIR	18	191	(77)	2516471
362	30.4	8.9	0.5	chr3	16065003	16065212	(182230347)	C	MIRb	SINE/MIR	(6)	256	18	2519869
5506	15.4	3.5	1.2	chr3	20621514	20622962	(177672597)	C	L1MA3	LINE/L1	(0)	7724	6752	2526366
606	29.8	4.0	2.4	chr3	21718461	21718708	(176576851)	C	MIR	SINE/MIR	(8)	254	3	2527780
14	7.2	6.9	0.0	chr3	24199773	24199801	(174095758)	+	(AAACA)n	Simple_repeat	1	31	(0)	2531494
738	26.7	11.2	5.3	chr3	28980559	28980918	(169314641)	C	MLT1L	LTR/ERVL-MaLR	(5)	605	222	2538557
251	37.1	6.1	5.2	chr3	30227663	30227972	(168067587)	C	L3b	LINE/CR1	(166)	5066	4754	2540254
208	28.6	8.4	0.0	chr3	32226919	32227016	(166068543)	+	MIR	SINE/MIR	81	187	(75)	2543472
414	31.0	12.2	1.4	chr3	32227082	32227300	(166068259)	+	MIRb	SINE/MIR	3	248	(20)	2543473
2190	11.5	0.0	3.1	chr3	32402090	32402411	(165893148)	C	AluSz	SINE/Alu	(0)	312	1	2543820
554	22.1	1.7	0.0	chr3	39559701	39559813	(158735746)	+	MER46C	DNA/TcMar-Tigger	81	195	(143)	2554725
1717	28.0	6.9	1.8	chr3	39559838	39560760	(158734799)	+	L1ME3B	LINE/L1	3411	4307	(1839)	2554726
23232	20.3	3.9	1.8	chr3	39913048	39917454	(158378105)	+	ERV24B_Prim-int	LTR/ERV1	3101	7593	(20)	2555191
2190	18.2	5.4	4.2	chr3	39917469	39917924	(158377635)	+	LTR24B	LTR/ERV1	5	465	(111)	2555191
830	7.6	6.4	0.8	chr3	40143657	40143788	(158151771)	C	L1MA7	LINE/L1	(0)	6291	6152	2555478
2551	21.8	0.8	0.8	chr3	40299374	40299908	(157995651)	C	MSTD-int	LTR/ERVL-MaLR	(1199)	536	2	2555722
2052	19.6	3.3	7.5	chr3	40299911	40300324	(157995235)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2555722
1993	16.6	0.0	0.3	chr3	42044154	42044461	(156251098)	C	AluJb	SINE/Alu	(5)	307	1	2558442
380	34.0	6.3	1.0	chr3	44554812	44555007	(153740552)	C	MIRb	SINE/MIR	(19)	249	43	2562296
295	22.9	0.9	2.7	chr3	53235995	53236082	(145059477)	C	MIRb	SINE/MIR	(160)	108	17	2577256
11	21.3	2.5	2.4	chr3	53236287	53236326	(145059233)	+	(GCAGAG)n	Simple_repeat	1	41	(0)	2577257
2491	8.3	0.0	1.0	chr3	53237641	53237954	(145057605)	+	AluSc8	SINE/Alu	1	311	(0)	2577261
236	32.1	0.9	8.2	chr3	53238777	53238898	(145056661)	+	MIRb	SINE/MIR	124	236	(32)	2577262
12	16.9	2.9	2.8	chr3	53270392	53270426	(145025133)	+	(GCTGG)n	Simple_repeat	1	36	(0)	2577332
1736	15.7	18.1	1.7	chr3	53354817	53355238	(144940321)	C	LTR54	LTR/ERV1	(3)	507	1	2577507
533	34.3	1.0	6.9	chr3	53355239	53355353	(144940206)	+	L2a	LINE/L2	3014	3117	(309)	2577506
258	26.8	14.6	4.9	chr3	53355344	53355481	(144940078)	+	L2a	LINE/L2	3215	3388	(38)	2577506
263	28.7	12.9	2.5	chr3	57951305	57951422	(140344137)	C	MIRb	SINE/MIR	(120)	148	17	2585001
1740	10.3	14.2	0.0	chr3	57975356	57975616	(140319943)	+	AluJr	SINE/Alu	1	304	(8)	2585070
517	22.7	6.4	0.8	chr3	57977833	57977965	(140317594)	C	L1ME4b	LINE/L1	(116)	776	636	2585079
1020	33.3	13.0	2.8	chr3	59185737	59186342	(139109217)	+	L3	LINE/CR1	2290	2966	(1133)	2587151
242	22.1	2.5	1.3	chr3	59245842	59245919	(139049640)	C	LTR90A	LTR	(8)	968	890	2587233
348	31.2	0.8	3.1	chr3	59246003	59246131	(139049428)	C	LTR90A	LTR	(181)	795	670	2587233
288	31.1	4.4	4.4	chr3	59246257	59246485	(139049074)	C	LTR90A	LTR	(411)	565	337	2587233
306	25.5	11.3	2.1	chr3	62084744	62084887	(136210672)	+	L2c	LINE/L2	3188	3346	(41)	2591737
1376	16.9	1.2	0.4	chr3	62604206	62604443	(135691116)	C	L1MCa	LINE/L1	(6268)	240	1	2592544
441	29.1	2.2	3.6	chr3	63450972	63451110	(134844449)	+	MIRc	SINE/MIR	24	160	(108)	2594056
1209	29.6	3.8	1.1	chr3	63809500	63809815	(134485744)	+	L2a	LINE/L2	2808	3127	(299)	2594702
501	8.8	0.0	11.1	chr3	63809816	63809865	(134485694)	C	MADE1	DNA/TcMar-Mariner	(0)	80	37	2594703
2097	12.0	1.4	0.7	chr3	63809866	63810157	(134485402)	+	AluSx1	SINE/Alu	1	294	(18)	2594704
501	8.8	0.0	11.1	chr3	63810158	63810196	(134485363)	C	MADE1	DNA/TcMar-Mariner	(44)	36	1	2594703
1209	31.1	10.8	1.1	chr3	63810197	63810442	(134485117)	+	L2a	LINE/L2	3128	3420	(6)	2594702
338	30.4	3.9	4.6	chr3	65210041	65210171	(133085388)	+	MIRb	SINE/MIR	105	234	(34)	2597058
661	27.3	8.4	2.8	chr3	66116292	66116780	(132178779)	C	MLT1H2	LTR/ERVL-MaLR	(1)	554	1	2598716
12	12.6	0.0	3.6	chr3	71255859	71255886	(127039673)	+	(AATTA)n	Simple_repeat	1	28	(0)	2606940
306	26.0	6.1	8.3	chr3	71256044	71256211	(127039348)	+	L3	LINE/CR1	3107	3270	(829)	2606941
25	0.0	0.0	0.0	chr3	73600339	73600366	(124695193)	+	(TC)n	Simple_repeat	1	28	(0)	2611419
4215	11.8	2.4	0.2	chr3	95923449	95924068	(102371491)	C	MER41B	LTR/ERV1	(0)	634	1	2636085
21	22.9	0.0	0.0	chr3	95924200	95924245	(102371314)	+	(TA)n	Simple_repeat	1	46	(0)	2636086
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
253	31.8	3.6	4.3	chr3	100526051	100526188	(97769371)	+	L2	LINE/L2	2720	2856	(563)	2641852
460	27.1	1.3	7.4	chr3	100526450	100526612	(97768947)	+	MIRb	SINE/MIR	26	178	(90)	2641853
712	20.8	2.6	7.5	chr3	101643829	101643989	(96651570)	+	L1M5	LINE/L1	5608	5760	(483)	2643340
4184	11.3	3.8	0.8	chr3	101643990	101644474	(96651085)	+	MER41B	LTR/ERV1	1	508	(126)	2643360
524	28.9	7.2	0.6	chr3	102179853	102180033	(96115526)	C	MER103C	DNA/hAT-Charlie	(103)	194	1	2644199
2545	6.7	0.0	1.3	chr3	102512151	102512465	(95783094)	C	AluYm1	SINE/Alu	(0)	311	1	2644627
13	30.5	0.0	0.0	chr3	104066492	104066539	(94229020)	+	(TTAA)n	Simple_repeat	1	48	(0)	2646592
958	29.4	8.9	4.4	chr3	104066619	104067024	(94228535)	C	L2a	LINE/L2	(32)	3394	2969	2646593
2033	20.6	2.2	6.2	chr3	104135496	104136027	(94159532)	C	LTR54	LTR/ERV1	(0)	510	1	2646672
13	14.2	5.7	5.4	chr3	104136028	104136041	(94159518)	+	(ATGA)n	Simple_repeat	4	16	(0)	2646673
1590	23.3	8.9	9.3	chr3	105597944	105598673	(92696886)	C	LTR8B	LTR/ERV1	(7)	813	1	2648454
1855	20.1	5.3	1.0	chr3	105598732	105599149	(92696410)	+	LTR56	LTR/ERV1	9	445	(0)	2648455
926	34.1	8.2	1.6	chr3	106428839	106429492	(91866067)	+	L2a	LINE/L2	2699	3405	(21)	2649510
1262	22.1	4.2	1.0	chr3	107217272	107217572	(91077987)	+	L1MB8	LINE/L1	5855	6165	(13)	2650503
766	32.2	7.7	2.7	chr3	107987296	107987630	(90307929)	+	Tigger19b	DNA/TcMar-Tigger	173	525	(25)	2651647
20	20.3	0.0	0.0	chr3	112640924	112640965	(85654594)	+	(CTT)n	Simple_repeat	1	42	(0)	2658116
1901	12.9	0.8	0.0	chr3	112682636	112682898	(85612661)	+	AluSq2	SINE/Alu	1	265	(48)	2658171
186	27.1	6.3	0.0	chr3	113085100	113085158	(85210401)	+	MIRb	SINE/MIR	94	156	(112)	2658701
2547	9.2	0.0	0.7	chr3	113085203	113085507	(85210052)	C	AluSx	SINE/Alu	(8)	304	2	2658702
485	27.6	5.6	0.2	chr3	115072862	115073044	(83222515)	+	MIRb	SINE/MIR	65	261	(1)	2661606
381	26.7	9.1	2.6	chr3	117815312	117815480	(80480079)	+	Tigger16b	DNA/TcMar-Tigger	154	302	(34)	2665402
242	34.3	7.7	3.6	chr3	119332501	119332575	(78962984)	C	CR1-3_Croc	LINE/CR1	(984)	2621	2548	2667394
50	4.0	0.0	0.0	chr3	119332585	119332636	(78962923)	+	(TC)n	Simple_repeat	1	52	(0)	2667396
38	8.3	0.0	0.0	chr3	119332637	119332688	(78962871)	+	(AC)n	Simple_repeat	1	52	(0)	2667397
623	29.2	7.2	2.0	chr3	119332861	119333108	(78962451)	C	MIRb	SINE/MIR	(1)	267	6	2667398
13	14.5	3.2	0.0	chr3	119643452	119643482	(78652077)	+	A-rich	Low_complexity	1	32	(0)	2667935
340	31.9	3.2	0.0	chr3	119643527	119643645	(78651914)	C	MIRc	SINE/MIR	(17)	251	129	2667936
470	28.1	16.1	2.3	chr3	119643691	119644036	(78651523)	C	L3	LINE/CR1	(2)	4097	3695	2667937
807	16.4	0.0	0.8	chr3	119664242	119664363	(78631196)	+	FLAM_C	SINE/Alu	5	125	(18)	2667970
379	30.2	8.4	11.4	chr3	119664364	119664605	(78630954)	C	L2c	LINE/L2	(229)	3158	2910	2667969
480	22.6	7.1	10.1	chr3	119664620	119664889	(78630670)	+	MER5C	DNA/hAT-Charlie	13	263	(0)	2667971
694	31.5	10.3	2.9	chr3	119664982	119665369	(78630190)	+	MLT1L	LTR/ERVL-MaLR	5	453	(157)	2667972
1834	17.9	0.3	0.3	chr3	120469195	120469485	(77826074)	C	AluJb	SINE/Alu	(21)	291	1	2669205
975	23.3	17.0	1.0	chr3	120469486	120469505	(77826054)	+	LTR50	LTR/ERVL	764	785	(10)	2669204
404	18.8	11.8	4.3	chr3	120469521	120469637	(77825922)	C	MLT1B	LTR/ERVL-MaLR	(4)	463	337	2669206
3714	15.2	2.6	2.9	chr3	120469608	120470245	(77825314)	+	MER41B	LTR/ERV1	5	596	(38)	2669207
340	27.0	6.2	1.4	chr3	128112219	128112357	(70183202)	+	MIRb	SINE/MIR	29	174	(94)	2681206
312	23.1	5.7	7.5	chr3	132536211	132536382	(65759177)	+	FRAM	SINE/Alu	33	276	(26)	2688590
249	21.4	0.0	0.0	chr3	132536437	132536478	(65759081)	C	MER119	DNA/hAT-Charlie	(540)	43	2	2688589
20	16.1	2.4	7.1	chr3	132630781	132630794	(65664765)	+	(AATAA)n	Simple_repeat	1	14	(0)	2688707
1827	17.0	2.4	0.3	chr3	132630795	132631077	(65664482)	+	AluJr	SINE/Alu	1	289	(23)	2688708
197	30.3	0.0	2.9	chr3	133943724	133943791	(64351768)	C	MIR3	SINE/MIR	(2)	206	141	2690708
13	6.5	5.3	7.5	chr3	133943985	133944022	(64351537)	+	(GCCT)n	Simple_repeat	1	40	(0)	2690709
337	34.6	14.0	2.5	chr3	133944038	133944396	(64351163)	+	L2b	LINE/L2	2968	3374	(1)	2690710
2119	22.1	4.1	8.0	chr3	136412056	136412818	(61882741)	+	L1MC4	LINE/L1	6941	7672	(370)	2694340
2132	13.4	0.0	0.7	chr3	136412859	136413163	(61882396)	C	AluSz6	SINE/Alu	(9)	303	1	2694341
191	30.6	5.8	1.0	chr3	141367464	141367562	(56927997)	C	L3	LINE/CR1	(370)	3729	3626	2702201
313	33.3	7.4	0.0	chr3	141407248	141407373	(56888186)	+	MIRb	SINE/MIR	10	145	(123)	2702247
319	20.2	14.5	1.1	chr3	141407611	141407705	(56887854)	C	MER5A1	DNA/hAT-Charlie	(0)	166	57	2702248
3788	17.3	1.3	1.1	chr3	147943241	147943942	(50351617)	C	MER39	LTR/ERV1	(0)	707	5	2711446
2052	19.1	4.0	0.7	chr3	148024043	148024454	(50271105)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2711576
21	0.0	0.0	0.0	chr3	149386872	149386894	(48908665)	+	(GT)n	Simple_repeat	1	23	(0)	2713496
23	12.4	0.0	0.0	chr3	149386894	149386928	(48908631)	+	(GA)n	Simple_repeat	1	35	(0)	2713497
234	30.5	2.1	2.1	chr3	149421808	149421904	(48873655)	+	MER5A	DNA/hAT-Charlie	40	136	(53)	2713560
212	20.0	2.0	2.0	chr3	149421979	149422029	(48873530)	C	L2	LINE/L2	(954)	2465	2415	2713561
454	37.4	0.0	2.4	chr3	149422058	149422268	(48873291)	C	MIR	SINE/MIR	(55)	207	2	2713562
595	16.0	1.9	2.8	chr3	150077724	150077832	(48217727)	C	U13_	snRNA	(0)	108	1	2714640
19	8.1	0.0	0.0	chr3	150077857	150077882	(48217677)	+	(TC)n	Simple_repeat	1	26	(0)	2714641
41	0.0	0.0	0.0	chr3	150077883	150077917	(48217642)	+	(TG)n	Simple_repeat	1	35	(0)	2714642
1103	22.8	8.0	4.0	chr3	150078087	150078411	(48217148)	C	MamRep4096	DNA/hAT-Tip100	(15)	411	73	2714643
528	28.0	9.1	1.3	chr3	150106642	150106793	(48188766)	C	MIR	SINE/MIR	(66)	202	35	2714697
247	11.6	4.5	6.5	chr3	150237811	150237856	(48057703)	C	MamTip2	DNA/hAT-Tip100	(83)	222	178	2714922
233	27.3	6.9	4.0	chr3	150238003	150238128	(48057431)	+	MIR3	SINE/MIR	19	148	(60)	2714923
3725	15.4	2.4	4.0	chr3	150599440	150600082	(47695477)	C	MER41B	LTR/ERV1	(2)	632	1	2715508
473	20.1	0.7	10.9	chr3	150600114	150600193	(47695366)	+	MER90a	LTR/ERV1	461	532	(82)	2715504
1471	17.9	13.9	1.4	chr3	150600194	150600538	(47695021)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	2715509
519	30.1	0.3	5.1	chr3	156180004	156180194	(42115365)	C	MIR	SINE/MIR	(72)	196	19	2723693
629	33.0	1.6	0.0	chr3	156180178	156180359	(42115200)	C	MIRb	SINE/MIR	(75)	193	9	2723694
469	30.4	6.0	0.0	chr3	156317279	156317449	(41978110)	+	MER131	DNA?	11	192	(23)	2723851
718	24.1	6.2	6.2	chr3	157146901	157147174	(41148385)	C	MARNA	DNA/TcMar-Mariner	(37)	549	276	2725053
455	29.7	6.2	0.9	chr3	157248600	157248813	(41046746)	+	L4_A_Mam	LINE/RTE-X	4551	4776	(214)	2725217
1346	27.1	7.5	0.2	chr3	157248942	157249351	(41046208)	C	LTR16A	LTR/ERVL	(9)	442	1	2725218
1947	15.1	1.3	0.7	chr3	158724825	158725122	(39570437)	C	AluJb	SINE/Alu	(11)	301	2	2727189
40	0.0	0.0	0.0	chr3	166527635	166527668	(31767891)	+	(AC)n	Simple_repeat	1	34	(0)	2737621
3345	5.8	0.0	10.4	chr3	170688807	170689306	(27606253)	C	LTR7	LTR/ERV1	(2)	448	1	2743436
871	17.4	2.6	0.0	chr3	170689324	170689472	(27606087)	C	AluJb	SINE/Alu	(157)	155	3	2743435
853	17.4	1.2	1.8	chr3	171351997	171352160	(26943399)	C	MER5A1	DNA/hAT-Charlie	(3)	163	1	2744388
14	4.3	4.2	0.0	chr3	172280353	172280376	(26015183)	+	(TGTT)n	Simple_repeat	1	25	(0)	2745859
3012	13.4	4.8	2.9	chr3	172659146	172659637	(25635922)	+	LTR22C0	LTR/ERVK	1	502	(0)	2746470
344	31.1	2.8	8.8	chr3	174957230	174957455	(23338104)	+	LTR78B	LTR/ERV1	909	1120	(176)	2749707
13	23.6	0.0	0.0	chr3	177463761	177463795	(20831764)	+	A-rich	Low_complexity	1	35	(0)	2753308
297	34.2	2.1	4.2	chr3	177590475	177590491	(20705068)	C	MIR3	SINE/MIR	(1)	207	193	2753517
11	7.3	10.3	0.0	chr3	178171134	178171162	(20124397)	+	A-rich	Low_complexity	1	32	(0)	2754326
282	39.0	1.4	1.0	chr3	188272868	188273086	(10022473)	C	MIRc	SINE/MIR	(23)	245	21	2771613
367	30.6	11.1	0.0	chr3	192884934	192885093	(5410466)	+	Plat_L3	LINE/CR1	3014	3193	(393)	2778617
2357	9.5	1.3	0.0	chr3	192899248	192899551	(5396008)	+	AluSx1	SINE/Alu	2	309	(3)	2778643
366	29.5	18.7	2.7	chr3	192899583	192900002	(5395557)	C	L2b	LINE/L2	(614)	2805	2291	2778642
216	25.4	14.8	3.1	chr3	194561783	194561941	(3733618)	+	MIR3	SINE/MIR	17	184	(78)	2781388
4619	10.2	1.5	0.3	chr3	194575118	194575783	(3719776)	C	LTR8	LTR/ERV1	(17)	674	1	2781418
199	33.7	1.1	1.1	chr4	14856985	14857071	(175357484)	+	MIR	SINE/MIR	29	115	(147)	2811672
355	33.0	7.5	8.8	chr4	15303132	15303607	(174910948)	C	L2c	LINE/L2	(0)	3387	2919	2812409
210	29.2	12.4	5.4	chr4	15333805	15333916	(174880639)	C	MIR3	SINE/MIR	(86)	122	2	2812470
283	32.4	10.6	7.5	chr4	15333924	15334123	(174880432)	+	L3	LINE/CR1	3629	3835	(264)	2812471
239	36.8	4.6	1.4	chr4	15334135	15334280	(174880275)	+	L3	LINE/CR1	3939	4089	(10)	2812471
243	30.1	18.6	6.2	chr4	33831420	33831727	(156382828)	C	L3b	LINE/CR1	(22)	5210	4856	2841316
873	23.2	3.5	2.0	chr4	37667236	37667486	(152547069)	C	MIR	SINE/MIR	(0)	262	8	2846457
237	31.0	3.3	4.1	chr4	38002572	38002692	(152211863)	C	L2a	LINE/L2	(0)	3426	3307	2847083
1578	19.9	9.0	3.5	chr4	38002763	38003224	(152211331)	+	LTR54B	LTR/ERV1	8	497	(1)	2847084
1154	30.6	8.4	5.2	chr4	38162082	38162814	(152051741)	C	LTR78	LTR/ERV1	(62)	1242	484	2847303
593	21.4	2.3	0.2	chr4	40577849	40577990	(149636565)	+	FLAM_C	SINE/Alu	2	220	(82)	2852352
1986	17.9	8.3	3.9	chr4	40577991	40578473	(149636082)	+	LTR54	LTR/ERV1	5	510	(0)	2852353
30	0.0	0.0	0.0	chr4	41155242	41155269	(149059286)	+	(TTTTTG)n	Simple_repeat	1	28	(0)	2853541
266	27.7	5.6	1.9	chr4	41155389	41155491	(149059064)	C	MER5A	DNA/hAT-Charlie	(82)	107	1	2853542
12	26.6	0.0	0.0	chr4	41155551	41155587	(149058968)	+	A-rich	Low_complexity	1	37	(0)	2853543
19	18.3	0.0	5.5	chr4	41155591	41155645	(149058910)	+	(GACA)n	Simple_repeat	1	55	(0)	2853544
1567	21.2	3.9	2.4	chr4	43331480	43331860	(146882695)	+	LTR52	LTR/ERVL	32	418	(3)	2856834
272	34.8	8.6	5.1	chr4	43331895	43332230	(146882325)	C	L2	LINE/L2	(806)	2613	2265	2856833
307	32.8	7.5	4.1	chr4	47213796	47213989	(143000566)	C	L1MC4	LINE/L1	(5491)	724	524	2861918
1608	21.2	12.3	1.5	chr4	47615416	47615827	(142598728)	+	MLT1C	LTR/ERVL-MaLR	3	465	(2)	2862528
2822	31.5	8.3	9.3	chr4	47615828	47617325	(142597230)	C	L2a	LINE/L2	(702)	2717	1255	2862527
362	23.2	0.0	0.0	chr4	48078832	48078900	(142135655)	+	L2a	LINE/L2	3344	3412	(14)	2863243
25	13.8	4.2	5.3	chr4	48078911	48078982	(142135573)	+	GA-rich	Low_complexity	1	75	(0)	2863244
4804	8.8	3.3	1.2	chr4	48079058	48079733	(142134822)	+	LTR8	LTR/ERV1	1	691	(0)	2863245
217	30.0	3.2	0.0	chr4	48173728	48173787	(142040768)	+	MIRb	SINE/MIR	10	71	(197)	2863408
284	31.3	12.2	0.0	chr4	53321861	53321975	(136892580)	C	L2b	LINE/L2	(0)	3375	3245	2867531
2503	9.7	0.4	1.2	chr4	53322055	53322439	(136892116)	+	MER41B	LTR/ERV1	1	366	(268)	2867532
184	28.6	2.0	0.0	chr4	67701574	67701622	(122512933)	C	L2a	LINE/L2	(2)	3424	3375	2887345
328	35.5	2.3	2.0	chr4	67701634	67701795	(122512760)	C	MIR3	SINE/MIR	(5)	203	43	2887346
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
180	28.8	13.3	7.1	chr4	73726368	73726454	(116488101)	C	L2b	LINE/L2	(87)	3288	3193	2895270
651	27.1	0.5	0.5	chr4	73726455	73726643	(116487912)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2895271
187	36.9	3.7	3.7	chr4	76206580	76206686	(114007869)	C	L2a	LINE/L2	(4)	3371	3265	2898888
258	25.3	1.2	7.1	chr4	80069225	80069309	(110145246)	+	Tigger19b	DNA/TcMar-Tigger	448	527	(23)	2904348
706	28.5	2.8	1.0	chr4	80678403	80678611	(109535944)	C	MIR	SINE/MIR	(0)	262	50	2905111
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
449	33.7	2.7	1.1	chr4	89753304	89753483	(100461072)	+	LTR88a	LTR/Gypsy?	530	712	(104)	2919076
234	35.7	3.1	1.6	chr4	89753374	89753501	(100461054)	+	LTR104_Mam	LTR/Gypsy	1292	1421	(88)	2919077
357	35.2	0.7	1.4	chr4	90995080	90995226	(99219329)	C	MIR	SINE/MIR	(78)	184	39	2920677
750	27.3	8.1	0.4	chr4	95731740	95731978	(94482577)	+	MIR	SINE/MIR	4	262	(0)	2926781
343	20.7	2.2	20.8	chr4	96165033	96165258	(94049297)	C	UCON1	Unknown	(148)	1238	1056	2927325
181	31.7	3.5	6.8	chr4	96165430	96165517	(94049038)	C	MIRc	SINE/MIR	(70)	198	114	2927326
305	27.7	13.8	3.2	chr4	97647163	97647285	(92567270)	+	MIR	SINE/MIR	7	144	(118)	2929155
13	20.7	2.1	4.1	chr4	102827165	102827212	(87387343)	+	(CGCGCC)n	Simple_repeat	1	49	(0)	2936199
273	24.7	5.2	0.0	chr4	106583824	106583896	(83630659)	C	UCON51	LTR?	(3)	247	171	2941006
13	18.9	0.0	0.0	chr4	108700340	108700369	(81514186)	+	(TTCA)n	Simple_repeat	1	30	(0)	2943916
188	26.7	0.0	0.0	chr4	108700376	108700420	(81514135)	C	L2c	LINE/L2	(1)	3386	3342	2943917
232	28.5	14.2	6.3	chr4	113967406	113967611	(76246944)	C	MIRb	SINE/MIR	(15)	253	29	2951512
620	23.7	1.9	0.7	chr4	113968083	113968235	(76246320)	C	MIR	SINE/MIR	(26)	236	82	2951513
350	26.5	7.5	4.5	chr4	114077412	114077565	(76136990)	+	MER68-int	LTR/ERVL	2411	2569	(421)	2951643
180	35.5	1.8	4.3	chr4	122783874	122783988	(67430567)	C	L2c	LINE/L2	(39)	3348	3237	2963016
2262	8.1	0.3	0.0	chr4	123890807	123891103	(66323452)	+	MER41-int	LTR/ERV1	5647	5944	(2)	2964618
3418	10.5	0.4	0.0	chr4	123891104	123891569	(66322986)	+	MER41A	LTR/ERV1	1	468	(86)	2964618
568	31.0	6.5	1.3	chr4	124177550	124177923	(66036632)	+	MLT1N2	LTR/ERVL-MaLR	116	536	(26)	2964972
213	35.1	5.9	0.0	chr4	124204165	124204275	(66010280)	C	MIRc	SINE/MIR	(114)	154	37	2965003
362	21.6	0.0	0.0	chr4	124953155	124953228	(65261327)	C	Tigger15a	DNA/TcMar-Tigger	(149)	566	493	2965957
1667	28.1	7.5	2.5	chr4	124980260	124980777	(65233778)	C	MLT1F2	LTR/ERVL-MaLR	(8)	552	7	2965997
231	31.1	7.5	9.0	chr4	125758769	125758945	(64455610)	C	L2c	LINE/L2	(2)	3385	3212	2967031
12	12.0	3.7	0.0	chr4	126052437	126052463	(64162092)	+	A-rich	Low_complexity	1	28	(0)	2967401
250	31.8	3.7	8.5	chr4	128517959	128518099	(61696456)	+	AmnSINE1	SINE/5S-Deu-L2	362	495	(80)	2970836
16	0.0	0.0	0.0	chr4	129232049	129232066	(60982489)	+	(A)n	Simple_repeat	1	18	(0)	2971919
445	33.1	3.3	6.6	chr4	140096354	140096670	(50117885)	+	Tigger15a	DNA/TcMar-Tigger	23	328	(387)	2985725
406	36.7	4.1	0.7	chr4	140096679	140096958	(50117597)	+	Tigger15a	DNA/TcMar-Tigger	375	664	(51)	2985726
39	6.0	1.9	0.0	chr4	142824269	142824321	(47390234)	+	(CTAT)n	Simple_repeat	1	54	(0)	2989452
3001	16.7	0.4	2.1	chr4	142824322	142824381	(47390174)	+	MLT2B2	LTR/ERVL	461	511	(4)	2989451
209	19.5	0.0	2.4	chr4	145317454	145317495	(44897060)	+	L2a	LINE/L2	3277	3317	(109)	2992730
806	28.4	4.3	0.4	chr4	145317531	145317799	(44896756)	+	ERV3-16A3_LTR	LTR/ERVL	128	407	(15)	2992731
322	23.1	0.8	10.7	chr4	145549511	145549641	(44664914)	+	L1MC4	LINE/L1	7924	8041	(1)	2993077
225	28.1	11.5	2.8	chr4	145549857	145549999	(44664556)	+	Charlie4z	DNA/hAT-Charlie	5	161	(6)	2993080
4145	18.2	4.5	0.6	chr4	152478073	152478914	(37735641)	C	L1MB4	LINE/L1	(13)	6167	5292	3003040
1352	14.5	2.0	0.0	chr4	169383627	169383874	(20830681)	+	L1MA4	LINE/L1	7462	7714	(5)	3026242
1874	15.4	2.0	3.3	chr4	170392032	170392394	(19822161)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	3	3027690
359	31.2	0.7	3.4	chr4	174009661	174009806	(16204749)	C	CR1-16_AMi	LINE/CR1	(394)	457	316	3032386
341	34.1	3.8	2.7	chr4	174024128	174024386	(16190169)	+	LTR78B	LTR/ERV1	1033	1294	(2)	3032409
15	17.1	0.0	4.7	chr4	174259920	174259962	(15954593)	+	(AAGTTTA)n	Simple_repeat	1	43	(0)	3032715
623	28.8	13.3	0.5	chr4	174260109	174260324	(15954231)	C	MIR	SINE/MIR	(0)	262	15	3032716
212	29.5	1.6	1.6	chr4	176541099	176541160	(13673395)	C	L2b	LINE/L2	(4)	3371	3310	3035679
232	25.8	7.5	0.0	chr4	176842066	176842127	(13372428)	C	MER21C	LTR/ERVL	(218)	720	654	3036075
934	18.6	9.8	17.7	chr4	176842181	176842558	(13371997)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	3036076
3478	11.7	2.9	0.6	chr4	177005653	177006161	(13208394)	C	MER41B	LTR/ERV1	(113)	521	1	3036311
278	20.1	0.3	1.8	chr4	177006162	177006221	(13208334)	C	MLT1E3	LTR/ERVL-MaLR	(593)	61	1	3036313
184	30.6	2.7	2.7	chr4	183335551	183335624	(6878931)	+	MamRTE1	LINE/RTE-BovB	690	763	(3049)	3044758
4613	10.7	0.0	4.3	chr4	184339405	184339941	(5874614)	C	MER41B	LTR/ERV1	(107)	527	1	3046401
2789	23.4	2.0	7.8	chr4	184339944	184339990	(5874565)	+	L1ME1	LINE/L1	5591	5628	(724)	3046398
2293	8.9	2.9	0.7	chr4	184339991	184340294	(5874261)	C	AluY	SINE/Alu	(0)	311	1	3046403
2045	9.7	6.1	0.7	chr4	185709022	185709299	(4505256)	C	AluSg	SINE/Alu	(16)	294	1	3048655
7149	6.3	4.7	0.0	chr5	1567392	1568346	(179969913)	C	LTR5B	LTR/ERVK	(0)	1002	1	3056365
876	26.9	5.1	2.8	chr5	1568391	1568677	(179969582)	C	L1MC5a	LINE/L1	(2322)	455	162	3056366
3254	19.9	5.7	2.4	chr5	14207713	14208558	(167329701)	+	L1ME1	LINE/L1	5194	6047	(132)	3071933
1612	20.9	10.9	1.1	chr5	14208560	14208932	(167329327)	+	MER57C2	LTR/ERV1	1	414	(20)	3071939
2077	14.3	0.0	0.0	chr5	17000891	17001191	(164537068)	+	AluSx1	SINE/Alu	9	309	(3)	3075983
4205	13.4	1.1	0.0	chr5	19241281	19241907	(162296352)	C	MER41B	LTR/ERV1	(0)	634	1	3079089
5571	13.5	1.8	1.7	chr5	27241005	27241951	(154296308)	+	L1PA16	LINE/L1	4185	5132	(1014)	3089629
4919	13.8	1.1	0.1	chr5	27241937	27242712	(154295547)	+	L1PA16	LINE/L1	5378	6161	(5)	3089629
16	5.2	0.0	0.0	chr5	31366895	31366914	(150171345)	+	(GT)n	Simple_repeat	1	20	(0)	3094820
452	28.4	5.0	6.4	chr5	31434907	31435136	(150103123)	C	MIRc	SINE/MIR	(3)	259	53	3094925
270	26.8	12.8	0.7	chr5	33370686	33370821	(148167438)	C	MIR	SINE/MIR	(78)	184	20	3098224
4290	7.8	1.1	0.0	chr5	34522323	34522870	(147015389)	C	MER41A	LTR/ERV1	(0)	554	1	3099926
919	29.3	9.1	3.1	chr5	34597010	34597432	(146940827)	+	LTR33	LTR/ERVL	47	497	(18)	3100066
272	27.9	0.0	0.0	chr5	34597470	34597548	(146940711)	+	MIR	SINE/MIR	183	261	(1)	3100065
1886	22.0	4.2	3.6	chr5	35883635	35884133	(145654126)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	4	3102024
362	33.1	10.7	7.2	chr5	35884189	35884494	(145653765)	+	L2c	LINE/L2	3070	3387	(0)	3102022
1304	25.5	2.3	0.3	chr5	37847817	37848115	(143690144)	+	MLT1H	LTR/ERVL-MaLR	2	306	(243)	3105117
1103	19.9	0.8	0.4	chr5	52960696	52961025	(128577234)	+	L1M4a2	LINE/L1	2283	2827	(2)	3119652
255	32.5	1.3	1.3	chr5	53089817	53089894	(128448365)	+	MIR3	SINE/MIR	89	166	(42)	3119818
229	3.5	0.0	0.0	chr5	57416603	57416631	(124121628)	C	LTR65	LTR/ERV1	(439)	230	202	3126748
332	33.8	15.1	2.8	chr5	57434697	57435329	(124102930)	+	L2	LINE/L2	1875	2598	(821)	3126773
581	26.3	9.2	4.3	chr5	57494370	57494719	(124043540)	+	HAL1	LINE/L1	1	369	(2138)	3126846
1256	21.0	1.9	2.2	chr5	57494779	57495094	(124043165)	C	MLT1H	LTR/ERVL-MaLR	(228)	321	7	3126847
245	22.7	14.7	0.0	chr5	57495116	57495225	(124043034)	C	Tigger9a	DNA/TcMar-Tigger	(31)	701	573	3126848
224	32.6	4.3	0.0	chr5	57692676	57692764	(123845495)	+	L3b	LINE/CR1	5066	5158	(74)	3127122
4371	6.7	0.4	0.0	chr5	57735327	57735878	(123802381)	+	MER41A	LTR/ERV1	1	554	(0)	3127175
18	22.6	5.8	0.0	chr5	57744963	57745014	(123793245)	+	(TC)n	Simple_repeat	1	55	(0)	3127193
27	8.2	0.0	0.0	chr5	57745016	57745054	(123793205)	+	(ACATAC)n	Simple_repeat	1	39	(0)	3127194
584	29.0	4.8	11.3	chr5	58452536	58452889	(123085370)	+	L2b	LINE/L2	3029	3358	(17)	3128134
858	24.6	5.3	7.8	chr5	63261992	63262405	(118275854)	C	L1ME1	LINE/L1	(0)	6179	5800	3134977
385	28.6	9.8	6.8	chr5	63262383	63263087	(118275172)	C	L1MEc	LINE/L1	(1449)	1303	251	3134978
278	21.6	6.3	7.4	chr5	72139306	72139426	(109398833)	+	MIR3	SINE/MIR	6	133	(135)	3148545
248	33.8	1.3	4.3	chr5	74167284	74167447	(107370812)	+	L2a	LINE/L2	3263	3421	(5)	3151590
635	28.1	11.3	5.1	chr5	74167453	74167864	(107370395)	+	Tigger15a	DNA/TcMar-Tigger	267	707	(8)	3151591
1820	15.9	0.7	1.4	chr5	76736639	76736933	(104801326)	+	AluJr	SINE/Alu	3	295	(17)	3155486
1808	17.4	0.3	1.3	chr5	78595509	78595807	(102942452)	C	AluJr	SINE/Alu	(8)	304	9	3158305
190	33.9	18.7	1.6	chr5	78806555	78806810	(102731449)	C	L3b	LINE/CR1	(744)	4488	4308	3158639
544	25.6	3.4	5.7	chr5	79971320	79971530	(101566729)	C	CR1-16_AMi	LINE/CR1	(147)	704	499	3160641
13	10.8	6.7	0.0	chr5	79971573	79971602	(101566657)	+	(TTA)n	Simple_repeat	1	32	(0)	3160642
2404	11.9	0.0	0.0	chr5	79971681	79971982	(101566277)	+	AluSz6	SINE/Alu	1	302	(10)	3160643
1407	11.7	7.4	0.0	chr5	91311058	91311270	(90226989)	C	MER30	DNA/hAT-Charlie	(0)	230	1	3176012
228	26.5	4.8	8.4	chr5	91311271	91311345	(90226914)	C	L2b	LINE/L2	(23)	3352	3273	3176011
301	25.2	7.0	5.3	chr5	91311385	91311497	(90226762)	+	L2b	LINE/L2	3261	3375	(0)	3176013
12	21.8	2.7	0.0	chr5	91978346	91978382	(89559877)	+	(TTTTTCA)n	Simple_repeat	1	38	(0)	3176970
409	30.9	5.2	4.5	chr5	94283188	94283411	(87254848)	C	MIR1_Amn	SINE/MIR	(0)	230	10	3179656
16	13.2	0.0	0.0	chr5	94470260	94470284	(87067975)	+	(A)n	Simple_repeat	1	25	(0)	3179865
196	32.8	4.2	14.3	chr5	95728245	95728482	(85809777)	+	L2c	LINE/L2	2948	3160	(227)	3181578
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
408	37.0	6.8	3.5	chr5	99019963	99020273	(82517986)	+	HAL1ME	LINE/L1	9	330	(2135)	3185925
1088	16.1	0.0	0.0	chr5	99020595	99020756	(82517503)	+	AluJr	SINE/Alu	137	298	(14)	3185926
2700	30.9	7.6	2.1	chr5	99900253	99901357	(81636902)	C	ERVL-E-int	LTR/ERVL	(1258)	4396	3162	3187045
180	31.3	4.3	2.9	chr5	102909651	102909719	(78628540)	+	MER5B	DNA/hAT-Charlie	109	178	(0)	3190736
2346	21.4	5.8	11.3	chr5	103407855	103408511	(78129748)	C	MLT1E2	LTR/ERVL-MaLR	(7)	620	2	3191402
421	31.4	9.3	0.6	chr5	103465666	103465841	(78072418)	+	L2a	LINE/L2	3229	3421	(5)	3191486
235	32.9	8.4	1.5	chr5	103466012	103466195	(78072064)	C	MIRc	SINE/MIR	(32)	236	31	3191488
774	31.9	10.5	0.9	chr5	104890985	104891430	(76646829)	+	MamRep605	LTR?	282	775	(74)	3193200
3147	11.1	2.4	3.5	chr5	109424300	109424550	(72113709)	+	MER84	LTR/ERV1	146	401	(106)	3198972
4798	11.8	0.0	1.7	chr5	109424551	109425251	(72113008)	+	LTR8	LTR/ERV1	1	689	(2)	3198974
14	25.2	0.0	0.0	chr5	111487234	111487275	(70050984)	+	(TTACATT)n	Simple_repeat	1	42	(0)	3201499
499	27.6	8.2	4.3	chr5	111495038	111495246	(70043013)	C	MIR3	SINE/MIR	(4)	226	17	3201506
15	24.9	0.0	0.0	chr5	111758220	111758253	(69780006)	+	(CA)n	Simple_repeat	1	34	(0)	3201828
181	31.8	8.5	1.8	chr5	111974811	111974919	(69563340)	C	L2c	LINE/L2	(2)	3385	3269	3202154
321	27.1	14.7	4.0	chr5	111975187	111975386	(69562873)	C	MLT1O	LTR/ERVL-MaLR	(8)	534	310	3202155
397	35.5	11.7	2.0	chr5	111997315	111997762	(69540497)	C	MamGypsy2-I	LTR/Gypsy	(3272)	894	398	3202185
429	28.6	1.5	0.8	chr5	111998065	111998198	(69540061)	+	MER5B	DNA/hAT-Charlie	41	175	(3)	3202186
471	21.4	20.4	3.6	chr5	111998351	111998544	(69539715)	C	HAL1ME	LINE/L1	(948)	1517	1283	3202187
360	29.3	8.3	5.0	chr5	111998650	111999154	(69539105)	C	HAL1ME	LINE/L1	(1348)	1117	512	3202187
318	27.0	10.3	1.0	chr5	112013210	112013411	(69524848)	C	hAT-N1_Mam	DNA/hAT-Tip100?	(3)	337	115	3202208
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
637	15.8	9.7	1.8	chr5	120544716	120544829	(60993430)	C	AluJr	SINE/Alu	(188)	124	1	3213660
362	32.3	16.0	2.8	chr5	121969066	121969524	(59568735)	C	MamRep605	LTR?	(120)	729	199	3215361
2082	13.6	0.0	1.9	chr5	123707780	123708088	(57830171)	C	AluSz6	SINE/Alu	(9)	303	1	3217755
514	28.6	8.3	4.5	chr5	125044396	125044637	(56493622)	+	MLT1J	LTR/ERVL-MaLR	1	252	(260)	3219545
193	37.9	19.1	0.0	chr5	125232712	125232880	(56305379)	+	LFSINE_Vert	SINE/tRNA	248	456	(3)	3219794
12	8.4	0.0	6.9	chr5	125410498	125410526	(56127733)	+	A-rich	Low_complexity	1	29	(0)	3220030
275	25.9	2.4	1.2	chr5	129074694	129074775	(52463484)	+	MLT1I	LTR/ERVL-MaLR	311	393	(18)	3224904
1106	21.5	10.6	2.5	chr5	131304866	131305271	(50232988)	C	L1ME1	LINE/L1	(16)	6163	5721	3227742
17	22.6	1.4	5.7	chr5	135399286	135399360	(46138899)	+	(CGGCCC)n	Simple_repeat	1	71	(0)	3234231
550	27.1	13.8	1.0	chr5	136016960	136017160	(45521099)	+	MIRb	SINE/MIR	38	268	(0)	3235103
478	33.3	16.1	4.0	chr5	136017477	136017797	(45520462)	C	L2c	LINE/L2	(55)	3320	2981	3235104
18	13.6	0.0	2.9	chr5	136020040	136020073	(45518186)	+	(CA)n	Simple_repeat	1	34	(0)	3235105
1808	17.5	10.1	2.8	chr5	137832510	137832968	(43705291)	+	LTR54B	LTR/ERV1	1	496	(2)	3237597
237	16.2	0.0	0.0	chr5	138469763	138469799	(43068460)	C	MER77B	LTR/ERVL	(282)	418	382	3238923
299	27.8	14.2	1.2	chr5	138470322	138470492	(43067767)	C	L2c	LINE/L2	(104)	3283	3087	3238924
235	28.1	4.3	6.9	chr5	142357425	142357569	(39180690)	C	MIRb	SINE/MIR	(42)	226	86	3245798
287	29.3	3.6	5.0	chr5	145947590	145947729	(35590530)	+	MIRb	SINE/MIR	131	268	(0)	3251572
235	35.3	1.0	5.6	chr5	145947748	145947855	(35590404)	C	L2c	LINE/L2	(2)	3385	3283	3251573
998	30.1	12.5	3.5	chr5	146872925	146873524	(34664735)	+	L2c	LINE/L2	2290	2951	(468)	3253328
411	18.8	2.0	0.0	chr5	146873526	146873621	(34664638)	C	L1ME2z	LINE/L1	(7)	6437	6340	3253329
13	4.5	0.0	7.4	chr5	147387350	147387376	(34150883)	+	(AATT)n	Simple_repeat	1	27	(0)	3254168
444	27.4	0.9	0.0	chr5	147532253	147532365	(34005894)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	3254414
229	32.7	4.7	4.7	chr5	147532418	147532523	(34005736)	+	MER5B	DNA/hAT-Charlie	66	171	(7)	3254415
3428	11.0	1.2	1.4	chr5	149445195	149445708	(32092551)	C	LTR10D	LTR/ERV1	(0)	513	1	3257750
839	27.7	8.2	8.8	chr5	149445709	149446074	(32092185)	C	MLT1H	LTR/ERVL-MaLR	(85)	464	83	3257748
2058	13.9	2.3	0.3	chr5	149446219	149446521	(32091738)	C	AluSz6	SINE/Alu	(3)	309	1	3257751
12	12.2	3.7	0.0	chr5	149453385	149453411	(32084848)	+	(TCCC)n	Simple_repeat	1	28	(0)	3257771
293	29.2	3.3	0.0	chr5	149453627	149453715	(32084544)	+	L2b	LINE/L2	3253	3344	(31)	3257763
767	22.4	13.5	0.0	chr5	149453720	149453911	(32084348)	C	MIR	SINE/MIR	(28)	234	13	3257772
1915	17.0	0.0	0.3	chr5	149485455	149485743	(32052516)	C	AluJb	SINE/Alu	(24)	288	1	3257858
12	3.8	6.7	3.1	chr5	149485744	149485759	(32052500)	+	(TCTCT)n	Simple_repeat	3	20	(0)	3257859
261	28.9	4.9	4.9	chr5	149486132	149486233	(32052026)	+	MLT1J1	LTR/ERVL-MaLR	66	167	(277)	3257860
4055	14.7	4.4	0.6	chr5	150142624	150143300	(31394959)	C	MER44D	DNA/TcMar-Tigger	(1)	704	1	3259292
405	28.0	7.7	0.6	chr5	150143301	150143400	(31394859)	+	MIR3	SINE/MIR	91	200	(8)	3259291
799	26.6	5.1	1.6	chr5	150298938	150299185	(31239074)	C	MIR	SINE/MIR	(0)	262	6	3259641
475	33.6	9.1	2.8	chr5	150299212	150299499	(31238760)	+	L2c	LINE/L2	3080	3387	(0)	3259642
398	32.8	0.0	1.6	chr5	150316886	150317006	(31221253)	C	MIR3	SINE/MIR	(67)	141	23	3259682
622	20.6	2.4	0.0	chr5	150377825	150377984	(31160275)	C	L1M4	LINE/L1	(3241)	2905	2742	3259806
1179	15.4	0.0	0.6	chr5	150729611	150729785	(30808474)	C	FAM	SINE/Alu	(11)	174	1	3260603
303	20.3	6.3	0.0	chr5	150729912	150729985	(30808274)	C	L1MC5	LINE/L1	(366)	8938	8860	3260601
764	19.2	9.5	0.0	chr5	150730002	150730173	(30808086)	C	MER3	DNA/hAT-Charlie	(18)	191	2	3260604
189	0.0	0.0	0.0	chr5	150759445	150759469	(30778790)	C	MIRc	SINE/MIR	(50)	218	194	3260632
2221	14.1	7.0	0.5	chr5	150759627	150760039	(30778220)	C	MER83	LTR/ERV1	(6)	442	1	3260633
13	13.3	2.7	5.3	chr5	153629197	153629233	(27909026)	+	(TCC)n	Simple_repeat	1	38	(0)	3265597
201	25.4	9.5	4.3	chr5	153629433	153629502	(27908757)	C	Tigger19b	DNA/TcMar-Tigger	(170)	380	307	3265598
2220	12.1	7.4	0.0	chr5	157748350	157748688	(23789571)	+	LTR47A	LTR/ERVL	1	366	(86)	3273296
778	27.7	8.5	9.9	chr5	158384852	158385008	(23153251)	+	MLT1J	LTR/ERVL-MaLR	318	498	(14)	3274507
314	28.0	15.5	2.8	chr5	158385102	158385281	(23152978)	+	MLT1M	LTR/ERVL-MaLR	23	229	(443)	3274509
230	21.4	11.0	5.3	chr5	169160597	169160690	(12377569)	C	L2b	LINE/L2	(2)	3373	3274	3291355
918	31.8	9.2	2.9	chr5	169349730	169350066	(12188193)	+	L2a	LINE/L2	3063	3426	(0)	3291665
338	38.1	12.0	2.2	chr5	169350325	169350692	(12187567)	C	L2c	LINE/L2	(59)	3328	2920	3291667
227	25.4	0.0	0.0	chr5	169970522	169970586	(11567673)	+	MIRc	SINE/MIR	78	142	(88)	3292721
738	33.4	14.0	1.2	chr5	170960343	170960860	(10577399)	+	L2a	LINE/L2	2391	2993	(394)	3294550
1354	10.8	0.6	0.0	chr5	170960870	170961045	(10577214)	C	AluSx1	SINE/Alu	(135)	177	1	3294551
227	25.2	21.1	0.0	chr5	172869882	172870004	(8668255)	C	MER117	DNA/hAT-Charlie	(35)	162	7	3298392
369	28.6	12.8	6.1	chr5	172870138	172870417	(8667842)	+	MER102b	DNA/hAT-Charlie	4	325	(16)	3298393
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
11	9.7	8.6	2.6	chr5	177446973	177447007	(4091252)	+	G-rich	Low_complexity	1	38	(0)	3307434
12	21.7	0.0	0.0	chr5	177447121	177447152	(4091107)	+	GA-rich	Low_complexity	1	32	(0)	3307435
412	20.8	2.3	3.0	chr5	177478800	177478906	(4059353)	C	MIRb	SINE/MIR	(110)	152	44	3307494
459	23.2	3.9	2.3	chr5	177478990	177479117	(4059142)	+	MIRb	SINE/MIR	76	205	(63)	3307495
15	16.7	5.0	0.0	chr5	177479167	177479206	(4059053)	+	(GCTCCA)n	Simple_repeat	1	42	(0)	3307496
274	35.1	11.1	2.7	chr5	177479363	177479693	(4058566)	+	L2a	LINE/L2	1866	2227	(1192)	3307497
3308	11.0	4.1	0.7	chr5	179612749	179613289	(1924970)	+	LTR6A	LTR/ERV1	5	564	(0)	3311199
1642	13.8	4.4	1.7	chr5	179613515	179613803	(1924456)	+	AluSx1	SINE/Alu	1	297	(15)	3311200
2317	12.3	2.1	7.1	chr6	2979556	2979829	(167826150)	+	MER4D1	LTR/ERV1	635	898	(2)	3318193
4258	12.6	0.2	5.1	chr6	2979919	2980585	(167825394)	+	MER41B	LTR/ERV1	1	634	(0)	3318195
207	23.7	3.3	0.0	chr6	15399663	15399721	(155406258)	+	MIR	SINE/MIR	157	217	(45)	3337903
4200	20.1	8.7	2.8	chr6	16135890	16137189	(154668790)	C	L1ME2z	LINE/L1	(87)	6357	4978	3339050
337	29.4	3.5	0.0	chr6	21916224	21916332	(148889647)	+	MIR	SINE/MIR	113	225	(37)	3348531
17	0.0	0.0	0.0	chr6	23349405	23349423	(147456556)	+	(T)n	Simple_repeat	1	19	(0)	3350421
12	18.6	5.4	0.0	chr6	23357246	23357282	(147448697)	+	(AATTGAA)n	Simple_repeat	1	39	(0)	3350434
1710	10.9	11.9	1.1	chr6	26104525	26104800	(144701179)	+	AluSz	SINE/Alu	2	311	(1)	3354639
730	22.1	9.5	6.8	chr6	26205551	26205846	(144600133)	+	LOR1b	LTR/ERV1	3	307	(154)	3354820
300	15.4	0.0	0.0	chr6	26520451	26520502	(144285477)	C	L1ME3A	LINE/L1	(3)	6170	6119	3355395
35	20.0	1.6	6.4	chr6	26520821	26520943	(144285036)	+	(CCCCTC)n	Simple_repeat	1	125	(0)	3355396
3957	7.2	1.7	0.4	chr6	26549862	26550375	(144255604)	C	MER41C	LTR/ERV1	(0)	521	1	3355447
645	7.1	0.0	1.2	chr6	26550403	26550486	(144255493)	+	AluSx3	SINE/Alu	217	299	(12)	3355448
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
18	20.3	0.0	0.0	chr6	30614692	30614726	(140191253)	+	(AC)n	Simple_repeat	1	35	(0)	3361894
391	24.4	4.7	0.0	chr6	30725854	30725935	(140080044)	C	AluJb	SINE/Alu	(79)	233	148	3362088
13	22.1	0.0	0.0	chr6	30814500	30814531	(139991448)	+	(TTC)n	Simple_repeat	1	32	(0)	3362298
567	26.0	8.9	2.4	chr6	30814592	30814843	(139991136)	+	MLT1J	LTR/ERVL-MaLR	230	499	(13)	3362299
1907	12.5	1.0	5.6	chr6	30814845	30815147	(139990832)	C	AluSq	SINE/Alu	(24)	289	1	3362300
978	24.2	14.3	1.3	chr6	30875930	30876322	(139929657)	C	Charlie29a	DNA/hAT-Charlie	(12)	707	255	3362426
252	32.0	6.0	1.6	chr6	30876395	30876521	(139929458)	C	Charlie29a	DNA/hAT-Charlie	(585)	134	2	3362426
186	33.9	5.9	0.8	chr6	30876522	30876649	(139929330)	+	MIRb	SINE/MIR	65	199	(69)	3362427
15	28.2	0.0	2.2	chr6	36676649	36676693	(134129286)	+	(TG)n	Simple_repeat	1	45	(0)	3373071
1890	23.2	5.2	4.3	chr6	37240131	37240685	(133565294)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3374322
895	27.6	6.0	11.6	chr6	37244688	37245134	(133560845)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	105	3374321
779	30.7	3.1	10.7	chr6	37245234	37245653	(133560326)	C	MLT1N2	LTR/ERVL-MaLR	(153)	409	23	3374332
180	30.0	0.0	0.0	chr6	44041533	44041592	(126764387)	+	L3b	LINE/CR1	4988	5047	(185)	3386466
310	27.1	11.5	0.4	chr6	44041918	44042051	(126763928)	+	L2c	LINE/L2	2991	3141	(246)	3386467
22	3.5	3.5	0.0	chr6	45331099	45331127	(125474852)	+	(TG)n	Simple_repeat	1	30	(0)	3388457
1509	20.9	1.6	7.3	chr6	52312120	52312516	(118493463)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3398330
410	28.8	4.6	11.3	chr6	52312601	52313023	(118492956)	C	L3	LINE/CR1	(1975)	2124	1732	3398326
263	34.9	8.8	1.2	chr6	52517702	52517869	(118288110)	C	MamSINE1	SINE/tRNA-RTE	(70)	220	39	3398640
208	35.9	9.9	4.2	chr6	52517976	52518309	(118287670)	C	L2c	LINE/L2	(2)	3385	3031	3398641
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
1799	6.6	4.6	0.0	chr6	52996047	52996272	(117809707)	C	AluSx	SINE/Alu	(75)	237	1	3399376
35	15.3	0.0	0.0	chr6	53360282	53360339	(117445640)	+	A-rich	Low_complexity	1	58	(0)	3400054
548	27.9	4.0	14.1	chr6	55882837	55883091	(114922888)	+	MIRc	SINE/MIR	2	229	(39)	3403460
333	30.3	13.9	1.9	chr6	57262287	57262444	(113543535)	C	LTR104_Mam	LTR/Gypsy	(2)	1507	1328	3405371
317	30.8	5.1	13.7	chr6	57262358	57262635	(113543344)	C	LTR88a	LTR/Gypsy?	(88)	728	476	3405372
11	26.9	3.6	1.8	chr6	57262860	57262914	(113543065)	+	(CCCCTCT)n	Simple_repeat	1	57	(0)	3405373
1809	21.4	4.9	2.8	chr6	57263229	57263685	(113542294)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3405374
635	21.7	5.8	1.8	chr6	64035008	64035171	(106770808)	+	MER20	DNA/hAT-Charlie	48	218	(1)	3411395
226	33.6	4.5	1.5	chr6	66419166	66419295	(104386684)	C	MamRep605	LTR?	(198)	651	518	3414276
356	31.9	15.1	1.3	chr6	73109939	73110097	(97695882)	C	L3	LINE/CR1	(3)	4096	3912	3422743
415	28.0	14.1	1.8	chr6	73513209	73513481	(97292498)	+	L2a	LINE/L2	3111	3422	(4)	3423635
868	22.4	4.6	0.9	chr6	73513564	73513793	(97292186)	+	L1M5	LINE/L1	5552	5790	(389)	3423636
1493	11.5	1.5	0.0	chr6	73513823	73514022	(97291957)	+	AluSx1	SINE/Alu	14	216	(96)	3423637
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
877	6.3	0.0	1.6	chr6	79257574	79257701	(91548278)	C	MER41B	LTR/ERV1	(508)	126	1	3431015
7380	9.6	2.3	0.6	chr6	79257702	79258797	(91547182)	C	MER41-int	LTR/ERV1	(0)	5946	4831	3431015
353	28.7	2.7	1.8	chr6	80607909	80608018	(90197961)	C	LTR88c	LTR/Gypsy?	(0)	862	752	3432801
342	33.1	9.1	0.6	chr6	80608473	80608642	(90197337)	C	LTR88c	LTR/Gypsy?	(605)	257	72	3432801
17	10.8	0.0	0.0	chr6	81295683	81295712	(89510267)	+	(TAAAA)n	Simple_repeat	1	30	(0)	3433587
240	22.9	5.9	5.0	chr6	83183218	83183318	(87622661)	+	L1MEd	LINE/L1	3	104	(6982)	3436193
414	40.8	7.2	5.3	chr6	83183505	83183731	(87622248)	+	L1MEd	LINE/L1	315	552	(6534)	3436193
2139	10.9	3.7	0.0	chr6	83183732	83184015	(87621964)	C	AluSq2	SINE/Alu	(18)	295	1	3436194
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
378	35.0	2.8	1.4	chr6	84645677	84645885	(86160094)	C	L4_C_Mam	LINE/RTE-X	(1756)	3382	3171	3438093
662	29.9	7.3	1.9	chr6	84646283	84646541	(86159438)	C	L4_C_Mam	LINE/RTE-X	(2979)	2159	1886	3438093
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
180	17.1	0.0	2.8	chr6	105992944	105992979	(64813000)	C	Penelope1_Vert	LINE/Penelope	(176)	911	877	3466237
209	32.3	10.3	0.0	chr6	110509621	110509716	(60296263)	+	MIRc	SINE/MIR	19	125	(143)	3473763
21	6.8	0.0	0.0	chr6	110509753	110509783	(60296196)	+	(TGTG)n	Simple_repeat	1	31	(0)	3473764
4370	12.6	0.9	0.2	chr6	110509814	110510442	(60295537)	+	MER41B	LTR/ERV1	1	634	(0)	3473765
2151	11.4	0.0	0.0	chr6	110574572	110574879	(60231100)	C	AluSx3	SINE/Alu	(0)	311	2	3473880
1559	12.5	6.5	2.0	chr6	110574947	110575257	(60230722)	+	LTR54	LTR/ERV1	1	376	(134)	3473881
818	17.9	0.0	0.0	chr6	110575240	110575384	(60230595)	+	MER57C2	LTR/ERV1	285	429	(5)	3473882
1688	8.9	0.4	3.7	chr6	119127921	119128166	(51677813)	+	MER4D0	LTR/ERV1	1	238	(634)	3486175
3273	14.4	1.7	0.4	chr6	119128163	119128692	(51677287)	C	LTR38A1	LTR/ERV1	(6)	537	1	3486176
5949	22.6	7.2	7.5	chr6	119540881	119541852	(51264127)	C	L1MEf	LINE/L1	(5199)	1001	82	3486714
225	28.1	10.7	1.3	chr6	121794736	121794822	(49011157)	C	MIR1_Amn	SINE/MIR	(93)	137	36	3489596
971	29.9	9.5	5.1	chr6	125793858	125794577	(45011402)	+	L4_B_Mam	LINE/RTE-X	4187	4941	(0)	3494831
220	33.0	7.8	5.0	chr6	129890355	129890645	(40915334)	C	L2c	LINE/L2	(5)	3370	3071	3500086
255	30.2	9.4	0.0	chr6	132334203	132334308	(38471671)	+	L2	LINE/L2	794	910	(2509)	3503698
247	31.6	1.2	2.5	chr6	132365469	132365549	(38440430)	C	Plat_L3	LINE/CR1	(0)	3586	3507	3503743
233	29.0	0.0	1.6	chr6	132365551	132365613	(38440366)	C	MIRc	SINE/MIR	(142)	126	65	3503744
220	28.7	1.0	11.4	chr6	134289299	134289412	(36516567)	C	L2c	LINE/L2	(8)	3379	3278	3506594
209	33.3	4.2	1.0	chr6	134909430	134909586	(35896393)	C	MIRc	SINE/MIR	(0)	208	49	3507666
17	0.0	0.0	0.0	chr6	134964823	134964841	(35841138)	+	(A)n	Simple_repeat	1	19	(0)	3507748
363	29.7	8.5	0.0	chr6	136251060	136251177	(34554802)	C	L2a	LINE/L2	(0)	3426	3298	3509585
2076	18.0	4.2	0.8	chr6	138800774	138801159	(32004820)	C	MLT1A1	LTR/ERVL-MaLR	(8)	400	1	3513575
13	18.9	2.8	0.0	chr6	151058671	151058706	(19747273)	+	(CCTGG)n	Simple_repeat	1	37	(0)	3531240
269	30.1	1.2	0.0	chr6	151068033	151068115	(19737864)	C	MamRTE1	LINE/RTE-BovB	(1131)	2681	2598	3531261
445	34.0	5.6	2.5	chr6	151068221	151068464	(19737515)	C	MamRTE1	LINE/RTE-BovB	(1416)	2396	2145	3531261
613	25.4	11.6	2.6	chr6	154387117	154387350	(16418629)	+	LTR33	LTR/ERVL	251	508	(7)	3536302
1704	19.5	10.3	2.6	chr6	155782351	155782771	(15023208)	+	MER31B	LTR/ERV1	10	466	(0)	3538563
379	29.1	17.4	1.0	chr6	155782830	155783030	(15022949)	+	MIRc	SINE/MIR	6	246	(22)	3538564
779	23.6	7.8	9.0	chr6	159974048	159974585	(10831394)	C	L1M5	LINE/L1	(574)	5605	5088	3544924
1008	17.6	2.4	8.1	chr6	159974586	159974808	(10831171)	C	MER20	DNA/hAT-Charlie	(9)	210	1	3544925
2148	13.0	0.0	0.0	chr7	5522756	5523048	(153822925)	+	AluSx	SINE/Alu	16	308	(4)	3567240
946	20.9	0.0	0.0	chr7	5523359	5523516	(153822457)	+	AluJr	SINE/Alu	137	294	(18)	3567241
944	14.3	0.0	0.0	chr7	5523519	5523651	(153822322)	+	AluJr	SINE/Alu	1	133	(179)	3567242
2227	11.9	0.0	1.7	chr7	5524762	5525063	(153820910)	+	AluSx	SINE/Alu	2	298	(14)	3567246
638	17.1	7.1	0.0	chr7	5525066	5525170	(153820803)	C	AluJo	SINE/Alu	(196)	116	4	3567247
1017	16.4	0.0	1.3	chr7	5525180	5525338	(153820635)	C	AluJr	SINE/Alu	(19)	293	137	3567248
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
181	32.3	0.0	1.5	chr7	5562540	5562605	(153783368)	C	L2a	LINE/L2	(346)	3080	3016	3567345
194	13.2	2.6	0.0	chr7	5596365	5596402	(153749571)	+	MIRc	SINE/MIR	113	151	(117)	3567438
205	13.6	10.2	0.0	chr7	5596372	5596415	(153749558)	+	MIR1_Amn	SINE/MIR	123	171	(59)	3567439
286	35.7	6.0	0.5	chr7	5596717	5596882	(153749091)	C	L2c	LINE/L2	(232)	3155	2981	3567440
1462	10.3	1.0	20.8	chr7	6443219	6443477	(152902496)	+	AluSq2	SINE/Alu	104	305	(8)	3569379
317	28.1	21.7	3.6	chr7	6443529	6443809	(152902164)	C	L3	LINE/CR1	(645)	3454	3109	3569381
749	30.2	2.1	2.5	chr7	12647405	12647648	(146698325)	+	MIR	SINE/MIR	2	244	(18)	3577637
10376	17.6	3.5	3.3	chr7	13770032	13772471	(145573502)	C	MER57A-int	LTR/ERV1	(1820)	4367	1743	3579153
61	19.2	0.7	2.9	chr7	13849679	13849817	(145496156)	+	A-rich	Low_complexity	1	140	(0)	3579255
33	0.0	0.0	0.0	chr7	13920442	13920469	(145425504)	+	(GT)n	Simple_repeat	1	28	(0)	3579355
12	19.7	0.0	0.0	chr7	14761722	14761750	(144584223)	+	(CCAG)n	Simple_repeat	1	29	(0)	3580387
258	34.1	8.5	4.7	chr7	14836989	14837203	(144508770)	C	MIR	SINE/MIR	(0)	262	39	3580486
3607	15.5	1.7	6.7	chr7	15198470	15199196	(144146777)	C	LTR8	LTR/ERV1	(0)	691	2	3580952
354	33.9	8.2	0.0	chr7	16267162	16267285	(143078688)	C	L2b	LINE/L2	(1)	3374	3240	3582263
523	26.9	1.2	1.8	chr7	16267301	16267463	(143078510)	C	MER5A1	DNA/hAT-Charlie	(2)	164	3	3582264
1264	32.4	6.2	1.9	chr7	16484529	16485041	(142860932)	+	LTR16E2	LTR/ERVL	15	550	(18)	3582520
584	30.2	10.5	0.2	chr7	18455612	18455860	(140890113)	C	UCON27	Unknown	(46)	1222	990	3585357
877	30.0	5.1	0.0	chr7	18540819	18541058	(140804915)	C	MIR	SINE/MIR	(3)	259	7	3585465
20	19.3	3.8	0.0	chr7	18653382	18653434	(140692539)	+	(CTTT)n	Simple_repeat	1	55	(0)	3585619
190	29.5	13.6	3.1	chr7	18653454	18653551	(140692422)	C	MER131	DNA?	(2)	213	104	3585620
2260	12.4	0.0	0.0	chr7	18788473	18788770	(140557203)	+	AluSx1	SINE/Alu	1	298	(14)	3585794
709	31.9	34.3	0.3	chr7	18866002	18866385	(140479588)	+	L2a	LINE/L2	2810	3335	(91)	3585876
277	34.0	3.5	7.0	chr7	18866477	18866653	(140479320)	+	L2c	LINE/L2	3176	3383	(4)	3585877
16	13.7	0.0	0.0	chr7	18977904	18977919	(140368054)	+	(AGAG)n	Simple_repeat	1	16	(0)	3586008
48	0.0	0.0	0.0	chr7	18977920	18977960	(140368013)	+	(AC)n	Simple_repeat	1	41	(0)	3586009
16	13.7	0.0	0.0	chr7	18977961	18977976	(140367997)	+	(AGAG)n	Simple_repeat	1	16	(0)	3586010
1323	14.7	9.4	6.2	chr7	22348688	22348808	(136997165)	+	L1MA4	LINE/L1	5947	6060	(240)	3590514
2069	12.0	0.7	1.3	chr7	22348809	22349108	(136996865)	+	AluSz6	SINE/Alu	5	302	(10)	3590515
12	11.6	3.3	3.2	chr7	22351121	22351150	(136994823)	+	(TGTTT)n	Simple_repeat	1	31	(0)	3590519
307	18.0	0.0	0.0	chr7	22351160	22351209	(136994764)	C	AluJr4	SINE/Alu	(187)	125	76	3590520
298	27.5	3.2	0.0	chr7	23299006	23299096	(136046877)	C	L2a	LINE/L2	(39)	3387	3294	3592090
987	31.9	8.3	3.7	chr7	24898787	24899323	(134446650)	C	L3	LINE/CR1	(45)	4054	3491	3594550
1512	9.5	4.5	3.3	chr7	25126029	25126268	(134219705)	C	L1MA3	LINE/L1	(5)	6300	6058	3594959
369	19.8	18.6	0.9	chr7	26187402	26187507	(133158466)	C	FRAM	SINE/Alu	(47)	129	1	3596577
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
16	16.1	0.0	0.0	chr7	26865244	26865271	(132480702)	+	A-rich	Low_complexity	1	28	(0)	3597642
2675	18.2	6.8	0.4	chr7	27677895	27678417	(131667556)	C	MER68	LTR/ERVL	(0)	563	5	3598843
462	28.1	3.5	2.6	chr7	28055590	28055753	(131290220)	+	L2a	LINE/L2	3231	3424	(2)	3599425
1071	16.1	3.6	2.6	chr7	29488698	29488888	(129857085)	+	MER20	DNA/hAT-Charlie	27	219	(0)	3601700
57	1.9	0.0	0.0	chr7	30671803	30671857	(128674116)	+	(TGA)n	Simple_repeat	1	55	(0)	3603457
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
814	22.2	16.3	1.5	chr7	31115250	31115582	(128230391)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	834	3604170
691	30.0	5.4	3.3	chr7	33452679	33453043	(125892930)	+	Tigger15a	DNA/TcMar-Tigger	229	601	(114)	3607869
249	30.3	5.3	1.1	chr7	33979995	33980084	(125365889)	C	L3b	LINE/CR1	(83)	5149	5056	3608675
180	33.9	8.0	1.7	chr7	34155168	34155284	(125190689)	+	MIR3	SINE/MIR	60	184	(24)	3608906
1951	18.2	1.9	3.8	chr7	36038113	36038314	(123307659)	+	MER47A	DNA/TcMar-Tigger	164	366	(0)	3611630
4291	7.0	1.6	1.8	chr7	36038522	36039034	(123306939)	+	MER41A	LTR/ERV1	1	522	(32)	3611632
329	35.9	4.0	3.4	chr7	39609120	39609266	(119736707)	+	HAL1	LINE/L1	1801	1948	(559)	3616804
334	28.5	5.4	2.5	chr7	39609286	39609483	(119736490)	+	HAL1	LINE/L1	2010	2213	(294)	3616804
10654	18.8	5.0	5.2	chr7	40355493	40357918	(118988055)	C	Cheshire	DNA/hAT-Charlie	(0)	2420	2	3618318
397	27.4	1.3	4.6	chr7	40423006	40423171	(118922802)	C	MIR	SINE/MIR	(90)	172	16	3618432
333	31.6	8.7	1.9	chr7	40423536	40423696	(118922277)	C	MER131	DNA?	(42)	173	1	3618434
2859	30.1	8.4	9.7	chr7	40436509	40438192	(118907781)	C	MamGypsy2-I	LTR/Gypsy	(660)	3506	1848	3618451
468	24.7	9.1	2.0	chr7	40493145	40493297	(118852676)	+	MIRb	SINE/MIR	29	193	(75)	3618555
265	32.6	2.1	0.0	chr7	40526267	40526358	(118819615)	+	MIR	SINE/MIR	166	259	(3)	3618591
915	19.9	2.2	0.0	chr7	40526436	40526611	(118819362)	C	MER5A	DNA/hAT-Charlie	(9)	180	1	3618592
1531	17.1	3.6	0.0	chr7	40535157	40535448	(118810525)	C	L1PA16	LINE/L1	(0)	6166	5864	3618604
1642	13.9	10.9	0.0	chr7	40535446	40535732	(118810241)	+	L1PA16	LINE/L1	5542	5863	(303)	3618604
795	11.5	0.0	1.9	chr7	40535733	40535836	(118810137)	C	AluSx	SINE/Alu	(210)	102	1	3618605
439	27.1	8.9	7.0	chr7	40543359	40543600	(118802373)	+	Penelope1_Vert	LINE/Penelope	820	1066	(21)	3618616
184	30.6	4.6	3.1	chr7	40586100	40586163	(118759810)	+	L2a	LINE/L2	3352	3416	(10)	3618686
842	21.4	2.5	0.0	chr7	40586238	40586429	(118759544)	+	MER3	DNA/hAT-Charlie	12	208	(1)	3618687
674	26.1	4.4	13.3	chr7	40611645	40611922	(118734051)	C	MIR	SINE/MIR	(0)	262	11	3618719
248	33.5	8.1	2.3	chr7	40715848	40716067	(118629906)	+	L2c	LINE/L2	3150	3383	(4)	3618874
467	26.3	3.9	1.2	chr7	40716807	40716979	(118628994)	C	MER104	DNA/TcMar-Tc2	(3)	178	1	3618875
2108	17.6	2.1	0.3	chr7	40717195	40717618	(118628355)	C	MER61C	LTR/ERV1	(0)	428	13	3618877
12	19.9	5.0	0.0	chr7	40717812	40717851	(118628122)	+	(CATAGA)n	Simple_repeat	1	42	(0)	3618878
367	32.9	6.3	5.7	chr7	40721529	40721686	(118624287)	+	LFSINE_Vert	SINE/tRNA	52	210	(249)	3618884
250	11.4	0.0	2.2	chr7	40722657	40722701	(118623272)	C	L1MA4	LINE/L1	(5)	6295	6252	3618885
204	35.4	3.4	3.4	chr7	41916647	41916763	(117429210)	C	OldhAT1	DNA/hAT-Ac	(1760)	1088	972	3620530
591	29.9	4.3	2.2	chr7	41916888	41917129	(117428844)	+	MIRb	SINE/MIR	8	261	(1)	3620531
14382	10.2	3.5	1.3	chr7	43666199	43669213	(115676760)	+	HUERS-P3b-int	LTR/ERV1	2661	7187	(1)	3622965
6991	25.1	11.8	1.6	chr7	43693085	43695551	(115650422)	+	L2a	LINE/L2	455	3315	(111)	3623004
18	30.8	0.0	3.3	chr7	44491243	44491302	(114854671)	+	(AT)n	Simple_repeat	1	60	(0)	3624272
950	22.8	7.3	5.5	chr7	44491315	44491662	(114854311)	C	LTR37B	LTR/ERV1	(0)	468	114	3624273
261	29.8	5.0	1.1	chr7	45112115	45112209	(114233764)	C	Charlie8	DNA/hAT-Charlie	(2303)	125	27	3625496
232	25.0	2.7	0.0	chr7	45112211	45112282	(114233691)	C	HAL1	LINE/L1	(402)	2105	2032	3625497
1792	29.0	14.4	5.1	chr7	46003324	46004562	(113341411)	C	L2	LINE/L2	(1806)	1613	240	3626691
1970	19.0	5.2	2.6	chr7	46138618	46139157	(113206816)	C	L1MD	LINE/L1	(1086)	5060	4506	3626844
2930	19.7	1.4	4.1	chr7	46139197	46139920	(113206053)	C	L1MD	LINE/L1	(2001)	4145	3442	3626844
3342	15.3	1.6	2.0	chr7	46370250	46370918	(112975055)	C	L1MB7	LINE/L1	(340)	5844	5175	3627150
37	34.0	1.2	3.0	chr7	46508220	46508385	(112837588)	+	(AT)n	Simple_repeat	1	168	(0)	3627325
348	33.2	8.6	3.7	chr7	46508391	46508480	(112837493)	C	L1M5	LINE/L1	(1121)	5025	4942	3627326
1335	25.3	7.9	3.9	chr7	46508481	46509015	(112836958)	C	MER34B	LTR/ERV1	(3)	562	5	3627327
37	25.8	3.6	2.1	chr7	46763969	46764099	(112581874)	+	(TCT)n	Simple_repeat	1	134	(0)	3627644
29	5.9	0.0	0.0	chr7	46764100	46764135	(112581838)	+	(CTC)n	Simple_repeat	1	36	(0)	3627645
2067	20.2	5.0	2.1	chr7	46764192	46764713	(112581260)	+	MER89	LTR/ERV1	14	551	(8)	3627646
16	28.8	3.6	2.3	chr7	46860402	46860484	(112485489)	+	(CCCTG)n	Simple_repeat	1	86	(0)	3627772
13	16.0	0.0	3.2	chr7	47453459	47453489	(111892484)	+	(CCTC)n	Simple_repeat	1	31	(0)	3628543
16	15.8	0.0	2.7	chr7	47453607	47453643	(111892330)	+	A-rich	Low_complexity	1	37	(0)	3628544
2185	10.5	3.9	0.0	chr7	47605369	47605664	(111740309)	+	AluSx1	SINE/Alu	1	308	(4)	3628749
225	23.2	1.9	2.9	chr7	47720678	47720745	(111625228)	C	MIRc	SINE/MIR	(46)	222	157	3628967
299	26.0	0.9	6.3	chr7	47720796	47720906	(111625067)	C	MLT1I	LTR/ERVL-MaLR	(0)	448	317	3628968
2166	10.9	1.0	0.0	chr7	47764135	47764428	(111581545)	+	AluSc	SINE/Alu	3	299	(10)	3629044
3612	24.0	3.5	4.8	chr7	47775170	47776369	(111569604)	+	L1M5	LINE/L1	2505	3688	(2458)	3629064
2159	19.6	11.2	4.9	chr7	47781709	47782088	(111563885)	C	L1MD1	LINE/L1	(996)	5150	4742	3629068
393	26.4	0.9	1.8	chr7	47782661	47782772	(111563201)	C	Chap1_Mam	DNA/hAT-Charlie	(102)	240	130	3629071
2339	9.1	0.3	0.3	chr7	47784477	47784772	(111561201)	C	AluSq2	SINE/Alu	(17)	296	1	3629073
353	24.6	5.6	4.3	chr7	47784785	47784934	(111561039)	C	L1MC4	LINE/L1	(1)	8041	7773	3629074
650	29.1	15.3	2.0	chr7	47786071	47786526	(111559447)	C	Charlie13a	DNA/hAT-Charlie	(857)	657	130	3629075
6658	9.8	2.0	1.2	chr7	47989679	47990639	(111355334)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3629330
1110	2.5	0.0	0.0	chr7	54759839	54759956	(104586017)	C	AluSg7	SINE/Alu	(191)	118	1	3637767
220	28.4	2.9	1.5	chr7	56106796	56106863	(103239110)	+	MIR1_Amn	SINE/MIR	63	131	(99)	3639946
380	30.2	12.0	0.9	chr7	56107124	56107409	(103238564)	C	L2a	LINE/L2	(8)	3367	3029	3639947
1767	29.6	5.9	6.2	chr7	64541544	64542714	(94803259)	+	L1M3a	LINE/L1	4040	4487	(1653)	3646404
256	30.4	2.9	1.9	chr7	66033167	66033270	(93312703)	+	MIR	SINE/MIR	158	262	(0)	3649050
498	21.9	3.1	3.1	chr7	66033280	66033406	(93312567)	C	MIR	SINE/MIR	(64)	198	72	3649051
1031	24.9	12.9	7.0	chr7	66034637	66035018	(93310955)	+	L1MC4	LINE/L1	7334	7735	(307)	3649052
2310	10.6	0.3	0.0	chr7	66035019	66035320	(93310653)	C	AluSz	SINE/Alu	(9)	303	1	3649053
19	10.5	0.0	0.0	chr7	66099784	66099814	(93246159)	+	(AGG)n	Simple_repeat	1	31	(0)	3649225
30	0.0	0.0	0.0	chr7	66100213	66100240	(93245733)	+	(AGG)n	Simple_repeat	1	28	(0)	3649226
12	5.6	0.0	0.0	chr7	66100275	66100293	(93245680)	+	(AGG)n	Simple_repeat	1	19	(0)	3649226
940	14.7	2.0	7.9	chr7	66141218	66141432	(93204541)	C	L1MA3	LINE/L1	(145)	6160	5959	3649336
257	30.8	11.8	0.8	chr7	66150547	66150667	(93195306)	+	MIR3	SINE/MIR	37	172	(36)	3649354
2366	23.6	4.8	4.6	chr7	69699927	69700340	(89645633)	C	L1ME4b	LINE/L1	(441)	451	29	3657228
242	16.7	8.3	0.0	chr7	69700336	69700401	(89645572)	C	L1MD3	LINE/L1	(0)	7995	7924	3657230
248	27.4	10.6	0.7	chr7	75732765	75732900	(83613073)	C	MER5A1	DNA/hAT-Charlie	(0)	166	16	3670372
248	28.7	10.0	1.8	chr7	75732941	75733050	(83612923)	+	L2c	LINE/L2	3267	3386	(1)	3670373
639	25.8	12.9	0.9	chr7	75733160	75733370	(83612603)	+	MIRc	SINE/MIR	2	241	(27)	3670374
1757	14.3	0.8	1.1	chr7	75938476	75938740	(83407233)	+	AluJo	SINE/Alu	1	264	(48)	3670960
2160	7.9	0.4	1.4	chr7	76293902	76294180	(83051793)	+	AluSx	SINE/Alu	5	280	(32)	3671801
1941	16.7	6.1	5.9	chr7	76294181	76294272	(83051701)	C	MER31A	LTR/ERV1	(411)	74	1	3671800
281	28.6	6.2	0.0	chr7	76294384	76294474	(83051499)	C	MIR3	SINE/MIR	(27)	181	85	3671802
587	34.1	10.5	3.2	chr7	77811927	77812332	(81533641)	+	L3	LINE/CR1	3458	3896	(203)	3674530
234	19.3	1.7	1.7	chr7	77903173	77903230	(81442743)	C	L1P4	LINE/L1	(423)	5751	5694	3674680
14	29.5	0.0	3.3	chr7	78139065	78139125	(81206848)	+	A-rich	Low_complexity	1	61	(0)	3675059
1381	16.8	4.3	1.6	chr7	78185024	78185337	(81160636)	C	MER33	DNA/hAT-Charlie	(1)	323	1	3675120
788	27.9	1.6	1.6	chr7	78301790	78302047	(81043926)	+	MIR	SINE/MIR	5	262	(0)	3675269
378	25.0	7.7	0.9	chr7	78302054	78302162	(81043811)	+	L2a	LINE/L2	3302	3418	(8)	3675270
191	28.0	14.8	0.0	chr7	78315073	78315147	(81030826)	C	MER5A	DNA/hAT-Charlie	(57)	132	45	3675287
1085	21.4	3.1	11.0	chr7	79615944	79616289	(79729684)	+	LTR8	LTR/ERV1	241	558	(133)	3677030
209	33.3	2.9	8.2	chr7	79953312	79953458	(79392515)	+	L2c	LINE/L2	3230	3368	(19)	3677448
379	31.9	6.2	9.8	chr7	80077942	80078462	(79267511)	C	L2c	LINE/L2	(254)	3133	2333	3677632
333	29.6	5.0	0.9	chr7	80078474	80078589	(79267384)	C	L2c	LINE/L2	(1293)	2126	2006	3677632
844	15.1	0.0	0.0	chr7	80275043	80275161	(79070812)	C	FLAM_C	SINE/Alu	(24)	119	1	3677954
432	24.0	4.4	10.1	chr7	80275162	80275286	(79070687)	C	L1MEj	LINE/L1	(240)	1920	1796	3677953
13	23.5	0.0	0.0	chr7	80324586	80324620	(79021353)	+	(TTAT)n	Simple_repeat	1	35	(0)	3678014
970	35.6	10.6	3.3	chr7	80440306	80441707	(78904266)	+	L2c	LINE/L2	1889	3426	(0)	3678200
824	20.4	1.8	2.4	chr7	80682532	80682697	(78663276)	C	MER58A	DNA/hAT-Charlie	(6)	218	54	3678500
399	29.9	0.2	0.2	chr7	80682698	80683719	(78662254)	+	(TA)n	Simple_repeat	1	1024	(0)	3678501
32	23.2	0.0	3.5	chr7	80705318	80705403	(78640570)	+	GA-rich	Low_complexity	1	86	(0)	3678528
40	0.0	0.0	0.0	chr7	80705406	80705439	(78640534)	+	(GT)n	Simple_repeat	1	34	(0)	3678529
194	34.4	5.3	5.3	chr7	80705612	80705780	(78640193)	C	L2a	LINE/L2	(0)	3426	3258	3678530
21	0.0	0.0	0.0	chr7	80827393	80827415	(78518558)	+	(T)n	Simple_repeat	1	23	(0)	3678682
671	29.9	4.7	2.5	chr7	80900413	80900659	(78445314)	C	MIR	SINE/MIR	(11)	251	10	3678780
244	29.1	0.0	9.2	chr7	81161306	81161359	(78184614)	C	MLT1L	LTR/ERVL-MaLR	(342)	268	216	3679182
523	19.1	0.0	0.0	chr7	81161581	81161669	(78184304)	+	MER58B	DNA/hAT-Charlie	250	338	(3)	3679184
3932	14.7	1.1	5.5	chr7	81161670	81162409	(78183564)	+	LTR62	LTR/ERVL	3	709	(0)	3679185
2338	13.7	7.0	0.8	chr7	81600288	81600677	(77745296)	+	MSTA	LTR/ERVL-MaLR	13	428	(0)	3679724
7789	13.3	2.5	0.3	chr7	81616745	81618017	(77727956)	C	HSMAR2	DNA/TcMar-Mariner	(1)	1301	1	3679746
355	38.3	7.0	4.7	chr7	81619849	81620251	(77725722)	C	L3	LINE/CR1	(198)	3901	3489	3679752
321	35.7	11.0	3.7	chr7	81623199	81623416	(77722557)	+	MIRc	SINE/MIR	2	237	(31)	3679759
246	40.5	8.5	2.7	chr7	81639229	81639601	(77706372)	C	L2c	LINE/L2	(10)	3365	2984	3679777
254	32.4	9.3	6.1	chr7	81685235	81685631	(77660342)	+	L2a	LINE/L2	2881	3304	(122)	3679849
507	30.7	13.4	4.5	chr7	81859625	81860003	(77485970)	+	Charlie24	DNA/hAT-Charlie	1333	1750	(700)	3680102
2188	15.4	0.0	7.3	chr7	82204827	82205211	(77140762)	+	LTR18A	LTR/ERVL	1	357	(0)	3680548
15	19.5	0.0	0.0	chr7	84021728	84021762	(75324211)	+	(AATG)n	Simple_repeat	1	35	(0)	3683060
12	13.1	2.7	5.3	chr7	85172983	85173019	(74172954)	+	(GAACAAG)n	Simple_repeat	1	38	(0)	3684470
28	12.0	2.2	0.0	chr7	85173119	85173164	(74172809)	+	(AG)n	Simple_repeat	1	47	(0)	3684471
1799	27.8	8.4	2.1	chr7	85478006	85478595	(73867378)	C	L1ME3A	LINE/L1	(19)	6154	5521	3684850
3258	8.5	12.5	0.2	chr7	85478596	85479081	(73866892)	+	MER41A	LTR/ERV1	1	554	(0)	3684851
191	33.9	0.0	0.0	chr7	85483733	85483797	(73862176)	+	L3b	LINE/CR1	4931	4995	(237)	3684856
187	32.9	1.2	1.2	chr7	85510327	85510406	(73835567)	+	L2c	LINE/L2	3272	3351	(36)	3684882
777	33.3	8.9	3.6	chr7	85510710	85511248	(73834725)	C	L2a	LINE/L2	(1)	3425	2843	3684883
12	29.6	1.8	1.8	chr7	85655173	85655227	(73690746)	+	(ATT)n	Simple_repeat	1	56	(0)	3685061
289	31.2	3.4	3.4	chr7	85655533	85655678	(73690295)	C	L1M7	LINE/L1	(5823)	395	250	3685054
2257	8.7	0.0	0.0	chr7	88044450	88044726	(71301247)	C	AluSc8	SINE/Alu	(15)	296	20	3688004
1858	16.1	19.4	8.9	chr7	90223141	90223659	(69122314)	C	LTR18B	LTR/ERVL	(27)	587	1	3690780
348	25.1	14.7	7.3	chr7	90824565	90824783	(68521190)	+	MIRc	SINE/MIR	31	268	(0)	3691667
19	21.7	4.4	2.8	chr7	90824813	90824880	(68521093)	+	(TAA)n	Simple_repeat	1	71	(0)	3691668
707	25.6	0.9	12.2	chr7	90910689	90910784	(68435189)	+	MIRb	SINE/MIR	42	119	(149)	3691764
1901	11.3	0.0	0.0	chr7	90910785	90911068	(68434905)	C	L1PA12	LINE/L1	(15)	6153	5870	3691765
1928	13.8	9.6	8.9	chr7	92685590	92686073	(66659900)	+	LTR54	LTR/ERV1	9	496	(14)	3694286
488	20.4	4.3	1.5	chr7	92752628	92752761	(66593212)	C	MER125	DNA	(12)	164	27	3694384
1746	12.4	0.7	0.0	chr7	93148693	93148966	(66197007)	+	MLT1B	LTR/ERVL-MaLR	1	276	(114)	3694873
3988	8.3	0.2	0.0	chr7	93148971	93149490	(66196483)	+	MER41C	LTR/ERV1	1	521	(0)	3694874
1625	11.3	0.4	8.7	chr7	93914285	93914549	(65431424)	+	AluSx	SINE/Alu	1	243	(69)	3695882
4207	12.9	0.6	1.9	chr7	94157450	94158091	(65187882)	C	MER41B	LTR/ERV1	(0)	634	1	3696236
581	30.0	4.2	4.9	chr7	94158092	94158145	(65187828)	C	L2	LINE/L2	(1108)	2311	2258	3696235
13758	1.9	0.0	0.1	chr7	94158150	94160538	(65185435)	+	L1PA3	LINE/L1	3769	6155	(0)	3696237
22	0.0	0.0	0.0	chr7	94296300	94296323	(65049650)	+	(T)n	Simple_repeat	1	24	(0)	3696415
19	11.2	0.0	0.0	chr7	94304123	94304151	(65041822)	+	(AG)n	Simple_repeat	1	29	(0)	3696425
454	34.2	2.5	1.2	chr7	94414644	94414803	(64931170)	C	MamSINE1	SINE/tRNA-RTE	(0)	290	129	3696591
1190	24.7	3.2	1.0	chr7	94595756	94596058	(64749915)	C	Tigger14a	DNA/TcMar-Tigger	(0)	324	15	3696872
238	29.9	4.1	4.9	chr7	97116977	97117099	(62228874)	+	MER5B	DNA/hAT-Charlie	42	163	(15)	3700297
2340	10.2	0.0	0.6	chr7	101139319	101139631	(58206342)	+	AluSx1	SINE/Alu	1	311	(1)	3708080
884	16.7	0.0	0.0	chr7	101140009	101140140	(58205833)	+	FLAM_C	SINE/Alu	1	132	(11)	3708081
17	19.3	2.4	0.0	chr7	101681465	101681506	(57664467)	+	(CACACA)n	Simple_repeat	1	43	(0)	3709400
386	23.5	7.3	0.0	chr7	101681866	101681967	(57664006)	+	MIR3	SINE/MIR	33	142	(66)	3709401
244	31.2	9.7	3.9	chr7	102381936	102382295	(56963678)	+	X7A_LINE	LINE/CR1	1	204	(46)	3710872
249	3.3	0.0	0.0	chr7	102812226	102812255	(56533718)	+	U6	snRNA	1	30	(77)	3711770
1247	9.9	9.4	0.4	chr7	102834918	102834975	(56510998)	+	L1MA8	LINE/L1	6218	6285	(6)	3711809
228	30.5	10.9	3.5	chr7	102835236	102835405	(56510568)	+	L3	LINE/CR1	3904	4087	(12)	3711811
184	20.6	0.0	0.0	chr7	102835480	102835513	(56510460)	+	L2b	LINE/L2	3331	3364	(11)	3711812
2926	0.7	0.0	0.0	chr7	102835604	102835908	(56510065)	C	AluYa5	SINE/Alu	(6)	305	1	3711813
273	28.7	1.7	10.2	chr7	102851082	102851209	(56494764)	+	MIR3	SINE/MIR	88	204	(4)	3711835
16	15.9	0.0	0.0	chr7	104897288	104897315	(54448658)	+	(GT)n	Simple_repeat	1	28	(0)	3714772
2691	8.8	0.6	0.0	chr7	104963815	104964157	(54381816)	C	LTR18C	LTR/ERVL	(0)	345	1	3714919
44	4.4	0.0	0.0	chr7	104964291	104964337	(54381636)	+	(TG)n	Simple_repeat	1	47	(0)	3714920
825	29.3	7.1	3.7	chr7	104972475	104972881	(54373092)	C	Charlie13b	DNA/hAT-Charlie	(4)	508	87	3714938
1620	15.6	1.1	2.9	chr7	104972903	104973178	(54372795)	+	AluJo	SINE/Alu	3	273	(39)	3714939
431	29.1	11.3	5.2	chr7	104973570	104973859	(54372114)	+	MLT1J1	LTR/ERVL-MaLR	113	422	(22)	3714941
342	35.8	15.0	1.8	chr7	105045878	105046182	(54299791)	+	L2	LINE/L2	2140	2495	(924)	3715061
17	8.0	0.0	0.0	chr7	105046369	105046395	(54299578)	+	(CTTT)n	Simple_repeat	1	27	(0)	3715063
524	24.6	10.3	4.5	chr7	105046406	105046652	(54299321)	C	L1M5	LINE/L1	(303)	5821	5559	3715064
242	26.3	9.5	0.9	chr7	105225382	105225496	(54120477)	C	Helitron3Na_Mam	RC/Helitron	(142)	344	219	3715354
507	22.4	3.9	0.7	chr7	105225520	105225667	(54120306)	C	Helitron3Na_Mam	RC/Helitron	(332)	154	2	3715354
297	25.5	2.9	5.6	chr7	105830071	105830178	(53515795)	C	MIRb	SINE/MIR	(116)	152	48	3716654
518	30.3	7.9	2.9	chr7	106655969	106656209	(52689764)	C	MIR	SINE/MIR	(1)	261	8	3717893
4320	10.9	4.0	3.0	chr7	106767153	106767852	(52578121)	C	LTR62	LTR/ERVL	(2)	707	1	3718033
296	34.9	11.4	2.7	chr7	106767859	106767985	(52577988)	C	MIRc	SINE/MIR	(20)	248	97	3718034
2254	14.0	6.2	0.3	chr7	106767986	106768364	(52577609)	+	MER57B2	LTR/ERV1	1	403	(0)	3718035
4321	9.3	1.3	2.8	chr7	106774627	106775270	(52570703)	C	MER41B	LTR/ERV1	(0)	634	1	3718049
541	26.3	0.7	3.8	chr7	107875149	107875306	(51470667)	+	MIRb	SINE/MIR	93	245	(23)	3719760
444	27.4	14.8	1.9	chr7	107890681	107890892	(51455081)	+	MIRb	SINE/MIR	2	245	(23)	3719791
2294	10.6	0.0	0.7	chr7	107953075	107953375	(51392598)	+	AluSx1	SINE/Alu	1	299	(13)	3719868
654	31.5	2.0	3.9	chr7	111238768	111238975	(48106998)	+	MIRb	SINE/MIR	21	224	(44)	3724059
1032	28.4	9.6	6.8	chr7	111409781	111411329	(47934644)	+	L1MEc	LINE/L1	94	2032	(720)	3724289
305	25.6	4.7	1.2	chr7	111437804	111437886	(47908087)	C	MER91B	DNA/hAT-Tip100	(104)	86	1	3724320
493	33.8	2.2	3.9	chr7	111951250	111951480	(47394493)	C	MIR	SINE/MIR	(27)	235	9	3725087
586	24.9	9.3	3.2	chr7	112595703	112596048	(46749925)	C	L1ME3Cz	LINE/L1	(768)	229	12	3726054
631	29.4	4.5	4.0	chr7	116270828	116271050	(43074923)	C	MIR	SINE/MIR	(36)	226	3	3730819
192	30.4	0.0	8.0	chr7	121381380	121381454	(37964519)	+	L2a	LINE/L2	3343	3411	(15)	3737579
41	0.0	0.0	0.0	chr7	121381657	121381691	(37964282)	+	(CA)n	Simple_repeat	1	35	(0)	3737580
8102	19.2	10.9	12.3	chr7	121543409	121544277	(37801696)	+	MER92-int	LTR/ERV1	4257	5069	(149)	3737848
821	16.5	1.5	0.0	chr7	121544280	121544412	(37801561)	+	LTR54	LTR/ERV1	13	147	(351)	3737851
1152	19.1	0.9	0.9	chr7	121544457	121544688	(37801285)	+	LTR54	LTR/ERV1	277	508	(2)	3737851
537	31.5	10.5	1.8	chr7	126728388	126728778	(32617195)	+	L1M6	LINE/L1	635	1063	(5433)	3744799
857	28.1	12.9	1.7	chr7	129489377	129489782	(29856191)	C	MER65D	LTR/ERV1	(0)	473	16	3749225
394	12.0	7.8	2.4	chr7	129489799	129489883	(29856090)	+	L1MA9	LINE/L1	6205	6294	(18)	3749226
16	17.1	0.0	4.7	chr7	129825841	129825883	(29520090)	+	(CCGCC)n	Simple_repeat	1	43	(0)	3749925
2323	9.5	1.3	0.0	chr7	129906199	129906503	(29439470)	C	AluSz6	SINE/Alu	(3)	309	1	3750066
358	24.8	9.6	2.2	chr7	130010043	130010196	(29335777)	+	MIR3	SINE/MIR	14	186	(22)	3750351
219	27.6	6.1	4.9	chr7	130010288	130010431	(29335542)	+	MIR1_Amn	SINE/MIR	31	185	(83)	3750352
2560	6.4	0.0	1.0	chr7	130026688	130027001	(29318972)	+	AluY	SINE/Alu	1	311	(0)	3750383
526	27.8	14.5	0.0	chr7	130903356	130903567	(28442406)	+	MIR	SINE/MIR	6	253	(9)	3751805
500	22.7	7.9	5.2	chr7	130959106	130959375	(28386598)	C	MER20B	DNA/hAT-Charlie	(0)	783	506	3751883
865	28.7	7.9	0.0	chr7	130959482	130959691	(28386282)	C	MER20B	DNA/hAT-Charlie	(465)	318	89	3751883
2339	12.3	0.0	0.0	chr7	130959692	130959991	(28385982)	+	AluSx	SINE/Alu	1	300	(12)	3751884
16	0.0	0.0	0.0	chr7	131012121	131012138	(28333835)	+	(A)n	Simple_repeat	1	18	(0)	3751967
248	34.0	8.5	1.2	chr7	131012263	131012426	(28333547)	+	MIRb	SINE/MIR	44	220	(48)	3751968
460	16.5	2.5	0.0	chr7	131012440	131012518	(28333455)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	429	3751969
427	21.6	13.9	7.2	chr7	131012561	131012740	(28333233)	C	MLT1J	LTR/ERVL-MaLR	(193)	319	126	3751969
1974	15.6	0.3	0.0	chr7	131625412	131625719	(27720254)	C	AluSx1	SINE/Alu	(2)	310	2	3753169
195	23.1	15.0	6.1	chr7	131625831	131625945	(27720028)	C	MIR3	SINE/MIR	(64)	144	18	3753170
361	30.7	16.0	0.6	chr7	131859490	131859653	(27486320)	+	MIR3	SINE/MIR	15	208	(0)	3753581
883	28.0	8.3	10.7	chr7	131859942	131860204	(27485769)	C	MLT1J2	LTR/ERVL-MaLR	(36)	412	160	3753582
568	18.9	5.3	10.2	chr7	131895962	131896138	(27449835)	C	MER45A	DNA/hAT-Tip100	(10)	168	1	3753643
576	32.8	6.5	2.9	chr7	132430974	132431212	(26914761)	+	MIR	SINE/MIR	15	262	(0)	3754395
4345	12.8	0.2	0.3	chr7	132548666	132549298	(26796675)	+	MER41B	LTR/ERV1	1	632	(2)	3754558
198	18.4	0.0	2.6	chr7	132933039	132933077	(26412896)	+	AmnSINE1	SINE/5S-Deu-L2	219	256	(319)	3755130
16	0.0	0.0	0.0	chr7	134654128	134654145	(24691828)	+	(AC)n	Simple_repeat	1	18	(0)	3757809
688	26.4	11.5	2.5	chr7	134654376	134654612	(24691361)	+	MIR	SINE/MIR	1	261	(1)	3757810
435	23.7	4.1	2.5	chr7	134730518	134730638	(24615335)	+	UCON79	DNA?	13	135	(36)	3757941
655	20.3	0.0	0.0	chr7	135585199	135585331	(23760642)	C	L1MD	LINE/L1	(3354)	2792	2660	3759241
319	26.9	9.9	1.4	chr7	135585380	135585526	(23760447)	+	CR1_Mam	LINE/CR1	1351	1511	(693)	3759242
1893	17.9	0.7	0.3	chr7	135673657	135673958	(23672015)	+	AluJb	SINE/Alu	1	303	(9)	3759391
887	25.2	4.5	3.2	chr7	135716663	135716879	(23629094)	+	MIRb	SINE/MIR	26	245	(23)	3759460
455	30.5	34.2	4.0	chr7	135716885	135717236	(23628737)	C	L3	LINE/CR1	(609)	3490	3019	3759458
367	34.0	3.0	1.0	chr7	135717296	135717491	(23628482)	+	Tigger15a	DNA/TcMar-Tigger	515	714	(1)	3759461
180	27.1	24.4	0.8	chr7	135923713	135923846	(23422127)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3636	3759828
620	31.6	11.5	3.5	chr7	136017712	136018164	(23327809)	C	LTR105_Mam	LTR/ERVL	(0)	600	107	3759990
372	18.8	2.8	0.0	chr7	136018176	136018244	(23327729)	C	LTR105_Mam	LTR/ERVL	(529)	71	1	3759990
452	31.9	3.5	1.2	chr7	136018253	136018420	(23327553)	C	Charlie29a	DNA/hAT-Charlie	(307)	412	241	3759989
501	27.7	7.1	0.8	chr7	136018613	136018743	(23327230)	+	MIRb	SINE/MIR	19	158	(110)	3759991
564	21.3	9.6	0.7	chr7	137932871	137933021	(21412952)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3762618
183	24.3	2.6	0.0	chr7	137933030	137933066	(21412907)	C	MIR3	SINE/MIR	(133)	75	38	3762619
716	26.5	5.6	3.1	chr7	137978278	137978503	(21367470)	+	MER102c	DNA/hAT-Charlie	75	306	(25)	3762689
2074	11.8	0.0	5.1	chr7	138257090	138257402	(21088571)	+	AluY	SINE/Alu	1	297	(14)	3763229
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
1246	17.6	5.2	7.3	chr7	139036415	139036455	(20309518)	+	MER33	DNA/hAT-Charlie	17	51	(273)	3764779
1756	17.9	1.9	0.3	chr7	139036456	139036762	(20309211)	C	AluJo	SINE/Alu	(0)	312	1	3764780
2343	8.8	0.3	0.0	chr7	139339886	139340182	(20005791)	C	AluSp	SINE/Alu	(15)	298	1	3765382
1049	28.4	16.3	3.4	chr7	139770331	139771270	(19574703)	C	Tigger10	DNA/TcMar-Tigger	(588)	1256	189	3766158
1955	15.4	0.0	2.6	chr7	140396019	140396323	(18949650)	C	AluJr	SINE/Alu	(15)	297	1	3767333
2181	9.2	0.3	1.0	chr7	143378572	143378875	(15967098)	C	AluSx1	SINE/Alu	(10)	302	1	3771832
745	33.0	4.7	3.1	chr7	143378966	143379324	(15966649)	C	LTR90A	LTR	(611)	365	1	3771833
12	25.8	5.5	0.0	chr7	143380491	143380545	(15965428)	+	(GCAGTCC)n	Simple_repeat	1	58	(0)	3771836
11	25.1	0.0	4.3	chr7	143380536	143380581	(15965392)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3771837
191	34.3	3.4	8.5	chr7	143384056	143384243	(15961730)	+	MamRTE1	LINE/RTE-BovB	2698	2875	(937)	3771841
1737	9.1	0.0	0.4	chr7	143385714	143385944	(15960029)	C	AluSz	SINE/Alu	(82)	230	1	3771845
117	32.2	4.2	1.0	chr7	143385945	143386132	(15959841)	+	(TG)n	Simple_repeat	1	201	(0)	3771846
306	38.5	2.5	1.9	chr7	143491149	143491307	(15854666)	C	MIR3	SINE/MIR	(19)	189	30	3772006
17	18.2	0.0	4.3	chr7	143492253	143492266	(15853707)	+	A-rich	Low_complexity	1	46	(0)	3772008
17	10.0	3.1	0.0	chr7	143492267	143492298	(15853675)	+	(AAACAA)n	Simple_repeat	1	33	(0)	3772009
414	33.8	5.7	1.3	chr7	143492358	143492507	(15853466)	+	MIR3	SINE/MIR	42	198	(10)	3772010
12	15.3	3.5	0.0	chr7	143496323	143496351	(15849622)	+	(CCATT)n	Simple_repeat	1	30	(0)	3772016
13	14.8	0.0	3.1	chr7	143497173	143497204	(15848769)	+	(GTGCTG)n	Simple_repeat	1	32	(0)	3772018
906	18.5	3.9	3.0	chr7	143499553	143499753	(15846220)	+	MLT1D	LTR/ERVL-MaLR	6	208	(297)	3772023
651	30.4	7.0	4.9	chr7	143500468	143500913	(15845060)	+	LTR78	LTR/ERV1	846	1301	(3)	3772025
225	28.6	11.9	2.8	chr7	143503751	143503894	(15842079)	+	MLT1N2	LTR/ERVL-MaLR	354	512	(50)	3772028
535	30.8	9.6	2.6	chr7	143514709	143514941	(15831032)	C	MIR	SINE/MIR	(1)	261	11	3772045
392	25.7	4.4	6.0	chr7	143515106	143515221	(15830752)	C	Tigger19a	DNA/TcMar-Tigger	(27)	296	183	3772046
237	26.4	1.4	4.0	chr7	147013741	147013815	(12332158)	+	L2c	LINE/L2	3257	3329	(58)	3776684
16	0.0	0.0	0.0	chr7	147859423	147859440	(11486533)	+	(A)n	Simple_repeat	1	18	(0)	3777842
908	13.9	6.2	1.2	chr7	147859973	147860139	(11485834)	+	THE1D	LTR/ERVL-MaLR	4	179	(196)	3777843
735	27.8	11.6	8.1	chr7	148110654	148111546	(11234427)	+	HAL1	LINE/L1	267	1195	(1312)	3778233
1279	28.0	11.8	3.2	chr7	148111615	148112261	(11233712)	+	HAL1	LINE/L1	1370	2079	(428)	3778233
2966	12.8	4.4	11.3	chr7	148606964	148607460	(10738513)	C	MER34B	LTR/ERV1	(85)	480	1	3779081
320	35.0	4.9	0.0	chr7	148772740	148772876	(10573097)	C	MER117	DNA/hAT-Charlie	(0)	197	54	3779358
765	0.0	0.0	0.0	chr7	148941488	148941571	(10404402)	+	HY5	scRNA	1	84	(0)	3779656
2128	12.8	0.3	1.6	chr7	149233486	149233791	(10112182)	+	AluSz	SINE/Alu	1	302	(10)	3780344
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
254	26.0	8.3	0.0	chr7	150312680	150312756	(9033217)	+	HERVH-int	LTR/ERV1	7568	7651	(62)	3781853
3759	7.5	0.2	0.0	chr7	150312817	150313286	(9032687)	+	LTR7C	LTR/ERV1	1	471	(0)	3781854
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
305	29.9	8.3	0.7	chr7	151368291	151368435	(7977538)	C	MLT1J1	LTR/ERVL-MaLR	(219)	225	69	3783331
1851	16.6	1.3	0.3	chr7	151599526	151599833	(7746140)	C	MER1B	DNA/hAT-Charlie	(28)	311	1	3783727
261	35.2	6.4	2.2	chr7	151728232	151728411	(7617562)	C	LTR90B	LTR	(496)	300	113	3783952
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
993	19.0	9.5	1.4	chr7	157310655	157311042	(2034931)	C	LTR54	LTR/ERV1	(5)	505	19	3792253
453	18.5	0.0	16.9	chr7	157311043	157311086	(2034887)	+	LTR62	LTR/ERVL	1	36	(673)	3792254
2060	12.6	1.7	0.0	chr7	157311087	157311371	(2034602)	+	AluSz	SINE/Alu	9	298	(14)	3792255
453	18.5	0.0	16.9	chr7	157311372	157311456	(2034517)	+	LTR62	LTR/ERVL	37	108	(601)	3792254
2147	6.2	0.0	0.0	chr7	157311459	157311714	(2034259)	+	AluSp	SINE/Alu	3	258	(55)	3792256
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
2006	14.2	0.0	1.1	chr8	8602295	8602575	(136536061)	+	AluJb	SINE/Alu	11	288	(24)	3805000
41	0.0	2.3	2.3	chr8	8648762	8648804	(136489832)	+	(AG)n	Simple_repeat	1	44	(0)	3805078
213	25.0	0.0	0.0	chr8	8664680	8664727	(136473909)	C	L2b	LINE/L2	(7)	3368	3321	3805107
13	22.5	2.0	3.9	chr8	11201987	11202036	(133936600)	+	(TCTTTT)n	Simple_repeat	1	51	(0)	3809245
264	33.5	4.7	3.2	chr8	13406511	13406766	(131731870)	C	Plat_L3	LINE/CR1	(291)	3295	3137	3812638
184	26.2	0.0	0.0	chr8	13406883	13406924	(131731712)	+	L3	LINE/CR1	3439	3480	(619)	3812639
193	36.2	7.5	2.6	chr8	17363461	17363613	(127775023)	+	L3b	LINE/CR1	4942	5102	(130)	3818080
259	27.5	2.4	5.9	chr8	17677880	17677964	(127460672)	C	L2c	LINE/L2	(14)	3373	3292	3818556
1597	13.8	12.8	0.0	chr8	19064886	19065195	(126073441)	+	LTR54B	LTR/ERV1	1	378	(132)	3820588
1843	14.7	2.8	0.4	chr8	19132255	19132533	(126006103)	C	AluJr	SINE/Alu	(26)	286	1	3820704
1946	11.1	0.4	3.9	chr8	19134003	19134282	(126004354)	C	AluSz	SINE/Alu	(42)	270	1	3820709
2512	14.0	8.7	0.0	chr8	19191550	19191957	(125946679)	C	LTR47A	LTR/ERVL	(0)	452	6	3820818
186	29.4	1.0	13.6	chr8	19209064	19209181	(125929455)	+	MIR	SINE/MIR	154	256	(6)	3820841
1966	13.9	0.3	3.5	chr8	28656933	28657242	(116481394)	C	AluSx1	SINE/Alu	(12)	300	1	3836619
467	29.5	11.6	3.9	chr8	29556491	29556719	(115581917)	C	MIR	SINE/MIR	(12)	250	2	3838127
626	29.9	3.4	1.3	chr8	29770198	29770431	(115368205)	+	MIRb	SINE/MIR	30	268	(0)	3838479
2721	14.6	10.0	2.7	chr8	30094288	30094807	(115043829)	C	LTR6A	LTR/ERV1	(0)	564	3	3839028
1369	12.2	7.2	10.9	chr8	30094808	30095089	(115043547)	+	AluJb	SINE/Alu	27	297	(15)	3839027
461	25.8	2.6	2.6	chr8	30137576	30137591	(115001045)	C	MIRb	SINE/MIR	(58)	210	193	3839129
4106	13.1	3.6	7.6	chr8	30137592	30138312	(115000324)	+	LTR8	LTR/ERV1	1	691	(0)	3839130
300	29.9	11.1	1.5	chr8	30254842	30255068	(114883568)	+	L2a	LINE/L2	3125	3426	(0)	3839383
1560	19.8	8.7	7.2	chr8	30255188	30255238	(114883398)	+	MSTD	LTR/ERVL-MaLR	1	40	(356)	3839384
184	31.3	11.5	6.5	chr8	32631467	32631589	(112507047)	C	MamRTE1	LINE/RTE-BovB	(2048)	1764	1635	3843280
13	10.0	5.9	2.8	chr8	32631698	32631731	(112506905)	+	(ATATAG)n	Simple_repeat	1	36	(0)	3843281
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
1985	21.6	9.5	6.8	chr8	41151641	41151762	(103986874)	+	MLT2B4	LTR/ERVL	506	717	(0)	3856519
18	21.4	3.3	3.2	chr8	41161698	41161757	(103976879)	+	(TTCC)n	Simple_repeat	1	62	(0)	3856535
249	9.8	7.1	3.2	chr8	42186716	42187276	(102951360)	+	(TCATCTA)n	Simple_repeat	1	601	(0)	3858300
588	17.9	1.9	0.0	chr8	42225630	42225735	(102912901)	C	U13_	snRNA	(0)	108	1	3858381
4245	6.1	1.8	3.4	chr8	42266541	42266989	(102871647)	+	MER41A	LTR/ERV1	1	441	(113)	3858477
219	36.3	0.8	0.8	chr8	66124096	66124220	(79014416)	+	L2c	LINE/L2	2619	2743	(676)	3886898
325	34.0	6.4	4.7	chr8	66124471	66124612	(79014024)	+	L2c	LINE/L2	3049	3188	(187)	3886898
2668	13.7	12.7	11.0	chr8	66124613	66125259	(79013377)	+	MER4A	LTR/ERV1	1	660	(4)	3886899
2315	9.4	1.0	0.0	chr8	66560986	66561282	(78577354)	+	AluSz	SINE/Alu	1	300	(12)	3887617
18	4.5	0.0	0.0	chr8	75859487	75859509	(69279127)	+	(AG)n	Simple_repeat	1	23	(0)	3901556
307	33.2	10.4	2.6	chr8	75859645	75859873	(69278763)	+	MIRc	SINE/MIR	20	268	(0)	3901557
181	38.2	7.5	3.5	chr8	76616951	76617091	(68521545)	C	MIR1_Amn	SINE/MIR	(83)	147	1	3902475
520	17.5	11.7	5.5	chr8	89796704	89796869	(55341767)	+	ORSL	DNA/hAT-Tip100	62	246	(29)	3920268
4192	11.5	2.8	2.1	chr8	89796870	89797498	(55341138)	+	MER41B	LTR/ERV1	1	634	(0)	3920269
776	27.3	2.7	5.2	chr8	90723016	90723282	(54415354)	C	MIR	SINE/MIR	(0)	262	3	3921561
13	8.5	4.0	0.0	chr8	92251234	92251258	(52887378)	+	(TTTCC)n	Simple_repeat	1	26	(0)	3923640
223	27.4	16.7	4.9	chr8	93844168	93844393	(51294243)	+	MIRc	SINE/MIR	4	261	(1)	3925913
558	34.2	7.7	2.3	chr8	93844449	93844888	(51293748)	C	L2c	LINE/L2	(675)	2744	2279	3925911
2292	8.8	0.3	0.3	chr8	93880720	93881013	(51257623)	+	AluSq2	SINE/Alu	1	294	(19)	3925987
428	30.7	10.5	1.4	chr8	94224546	94224823	(50913813)	+	Tigger14a	DNA/TcMar-Tigger	1	306	(18)	3926487
17	10.5	3.2	0.0	chr8	94225126	94225156	(50913480)	+	(TAT)n	Simple_repeat	1	32	(0)	3926488
748	23.2	8.3	4.5	chr8	97618181	97618424	(47520212)	C	MIRb	SINE/MIR	(3)	265	12	3932015
423	32.4	17.9	4.5	chr8	97618573	97618927	(47519709)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	102	3932016
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
25	14.3	0.0	0.0	chr8	103926449	103926494	(41212142)	+	(GAGA)n	Simple_repeat	1	46	(0)	3942960
2007	23.7	9.1	2.2	chr8	104239714	104240296	(40898340)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	1	3943411
326	29.1	6.9	10.7	chr8	104240642	104240828	(40897808)	C	MIR3	SINE/MIR	(4)	204	29	3943412
2049	15.0	6.5	0.0	chr8	106060474	106060807	(39077829)	+	LTR18A	LTR/ERVL	1	357	(0)	3945971
768	31.2	9.6	1.9	chr8	106061145	106061731	(39076905)	+	ERVL-E-int	LTR/ERVL	3504	4096	(1571)	3945972
1048	25.6	2.5	1.1	chr8	109291972	109292248	(35846388)	+	MER58B	DNA/hAT-Charlie	1	281	(60)	3950650
375	34.9	8.0	1.3	chr8	118011484	118011715	(27126921)	C	MIRb	SINE/MIR	(18)	250	2	3962541
13	9.8	0.0	0.0	chr8	118011986	118012007	(27126629)	+	(CAG)n	Simple_repeat	1	22	(0)	3962542
1441	21.3	12.1	1.4	chr8	121670488	121670921	(23467715)	C	LTR54B	LTR/ERV1	(11)	487	1	3968674
360	27.2	7.5	4.2	chr8	121670922	121671063	(23467573)	C	MIRb	SINE/MIR	(80)	188	42	3968675
278	32.5	2.4	0.0	chr8	122312975	122313057	(22825579)	C	MER81	DNA/hAT-Blackjack	(0)	114	30	3969663
4680	7.2	0.2	0.0	chr8	124450022	124450574	(20688062)	C	MER41A	LTR/ERV1	(0)	554	1	3973736
323	26.7	3.7	8.4	chr8	125333857	125333999	(19804637)	C	MIRc	SINE/MIR	(121)	147	12	3975355
322	27.0	6.2	0.4	chr8	125334007	125334129	(19804507)	+	MIR	SINE/MIR	65	196	(66)	3975356
279	23.1	42.1	2.2	chr8	130263621	130263760	(14874876)	C	MIR	SINE/MIR	(68)	200	5	3984676
376	22.4	11.7	1.5	chr8	130263829	130263984	(14874652)	C	MIRc	SINE/MIR	(84)	184	6	3984677
8134	7.5	1.6	0.0	chr8	145021244	145022259	(116377)	C	LTR5A	LTR/ERVK	(0)	1033	1	4008436
27966	12.8	0.4	0.6	chr8	145022262	145026351	(112285)	C	HERVK-int	LTR/ERVK	(2)	7534	3452	4008436
493	33.0	2.7	1.2	chr9	8188900	8189107	(130205610)	C	UCON66	Unknown	(249)	316	52	4020781
418	35.0	1.8	4.8	chr9	12708634	12708801	(125685916)	+	MIRc	SINE/MIR	3	165	(103)	4026613
14	13.3	2.9	2.8	chr9	16516214	16516249	(121878468)	+	(TTTG)n	Simple_repeat	1	36	(0)	4032035
1616	16.0	12.9	3.4	chr9	18379128	18379574	(120015143)	+	LTR54B	LTR/ERV1	1	496	(2)	4034589
461	28.7	0.9	0.0	chr9	18393385	18393492	(120001225)	+	MER81	DNA/hAT-Blackjack	6	114	(0)	4034606
422	25.6	9.8	5.0	chr9	18393785	18394006	(120000711)	+	MLT1L	LTR/ERVL-MaLR	364	597	(13)	4034607
3473	10.9	5.5	0.0	chr9	26261370	26261917	(112132800)	C	LTR19B	LTR/ERV1	(0)	580	1	4045417
3410	14.2	3.3	5.0	chr9	26261918	26262406	(112132311)	C	LTR26	LTR/ERV1	(124)	479	1	4045416
243	18.9	1.9	0.0	chr9	29039744	29039796	(109354921)	C	MLT1M	LTR/ERVL-MaLR	(472)	200	147	4049401
16	19.6	2.9	0.0	chr9	29974574	29974608	(108420109)	+	(AT)n	Simple_repeat	1	36	(0)	4050587
260	30.8	18.0	3.6	chr9	31304710	31304874	(107089843)	+	MIRb	SINE/MIR	47	240	(28)	4052213
2349	9.1	1.3	0.0	chr9	33100921	33101216	(105293501)	C	AluSq2	SINE/Alu	(13)	300	1	4054760
4481	11.1	0.2	3.5	chr9	33101217	33101362	(105293355)	C	MER41B	LTR/ERV1	(488)	146	1	4054759
2151	10.8	3.3	0.0	chr9	35025826	35026120	(103368597)	+	AluSz	SINE/Alu	1	305	(7)	4058240
2260	13.2	2.0	7.2	chr9	35026121	35026204	(103368513)	C	MER83	LTR/ERV1	(53)	395	315	4058241
4240	6.4	1.8	1.1	chr9	35026205	35026754	(103367963)	+	MER41A	LTR/ERV1	1	554	(0)	4058242
338	25.4	8.2	3.9	chr9	37964542	37964671	(100430046)	C	MIR3	SINE/MIR	(98)	170	33	4063721
1350	23.5	5.7	12.1	chr9	82021231	82021700	(56373017)	C	MLT1H	LTR/ERVL-MaLR	(109)	440	3	4100922
256	26.8	6.7	10.2	chr9	83282108	83282215	(55112502)	+	MIR3	SINE/MIR	57	160	(48)	4102623
271	24.2	3.1	0.0	chr9	83282216	83282277	(55112440)	C	MER58D	DNA/hAT-Charlie	(0)	386	323	4102624
236	19.4	1.6	4.6	chr9	83966146	83966210	(54428507)	C	SVA_E	Retroposon/SVA	(980)	402	340	4103843
417	10.3	1.5	2.9	chr9	83966176	83966243	(54428474)	+	AluSz6	SINE/Alu	227	293	(19)	4103844
1634	13.5	7.2	0.4	chr9	83966289	83966548	(54428169)	C	AluJb	SINE/Alu	(28)	284	6	4103845
227	14.0	25.0	0.0	chr9	87091146	87091202	(51303515)	C	LTR102_Mam	LTR/ERVL	(27)	824	749	4108925
1725	23.6	11.0	8.8	chr9	87091250	87091770	(51302947)	C	LTR102_Mam	LTR/ERVL	(91)	760	260	4108925
3798	10.8	0.4	0.0	chr9	89138165	89138709	(49256008)	C	MER41A	LTR/ERV1	(7)	547	1	4112131
7350	9.4	2.2	1.1	chr9	89138710	89139809	(49254908)	C	MER41-int	LTR/ERV1	(2)	5944	4833	4112131
249	31.7	12.9	1.0	chr9	91378648	91378749	(47015968)	C	Charlie17a	DNA/hAT-Charlie	(16)	201	86	4115113
258	31.1	0.0	5.3	chr9	92146461	92146555	(46248162)	+	MIR3	SINE/MIR	40	129	(79)	4116256
13	4.0	7.7	0.0	chr9	92146683	92146708	(46248009)	+	(AGGGA)n	Simple_repeat	1	28	(0)	4116257
37	25.8	3.9	1.5	chr9	92147241	92147368	(46247349)	+	(CTTC)n	Simple_repeat	1	133	(0)	4116258
265	29.3	7.2	6.7	chr9	94937587	94937765	(43456952)	+	L2c	LINE/L2	3020	3199	(188)	4120510
359	15.5	0.0	7.8	chr9	94937826	94937873	(43456844)	+	MADE2	DNA/TcMar-Mariner	10	57	(23)	4120522
2438	8.0	0.0	0.3	chr9	94937874	94938172	(43456545)	C	AluSc8	SINE/Alu	(13)	298	1	4120523
359	15.5	0.0	7.8	chr9	94938173	94938200	(43456517)	+	MADE2	DNA/TcMar-Mariner	58	80	(0)	4120522
2526	8.0	0.0	1.0	chr9	96340337	96340649	(42054068)	+	AluSg	SINE/Alu	1	310	(0)	4122668
4412	6.5	0.4	0.2	chr9	96420849	96421401	(41973316)	+	MER41A	LTR/ERV1	1	554	(0)	4122837
16	8.1	0.0	0.0	chr9	99416017	99416042	(38978675)	+	(AACA)n	Simple_repeat	1	26	(0)	4128419
47	4.3	0.0	0.0	chr9	99416254	99416302	(38978415)	+	(AC)n	Simple_repeat	1	49	(0)	4128420
20	3.2	2.9	2.9	chr9	105064159	105064192	(33330525)	+	(CACCAT)n	Simple_repeat	1	35	(0)	4136808
367	38.5	7.5	2.2	chr9	109816240	109816872	(28577845)	C	L2	LINE/L2	(2202)	1217	549	4145167
354	34.3	14.1	3.2	chr9	110659792	110660264	(27734453)	C	L2c	LINE/L2	(439)	2980	2448	4146612
1563	20.2	5.0	0.3	chr9	112011438	112011745	(26382972)	C	MER58B	DNA/hAT-Charlie	(0)	341	19	4149007
395	30.8	7.2	4.0	chr9	112011828	112012003	(26382714)	C	MamGypLTR1b	LTR/Gypsy	(323)	459	278	4149006
273	22.7	1.3	2.6	chr9	114691697	114691773	(23702944)	+	MIRb	SINE/MIR	100	175	(93)	4154237
500	28.5	9.5	1.3	chr9	115109242	115109472	(23285245)	C	MIR	SINE/MIR	(0)	262	11	4155031
217	34.9	6.7	0.0	chr9	115689147	115689229	(22705488)	C	MIR3	SINE/MIR	(30)	178	90	4156025
1331	27.7	5.6	5.6	chr9	115691088	115691676	(22703041)	+	MLT1L	LTR/ERVL-MaLR	22	610	(0)	4156030
372	31.2	6.9	3.4	chr9	115691756	115691964	(22702753)	+	MLT1M	LTR/ERVL-MaLR	249	465	(207)	4156029
208	36.0	3.4	1.1	chr9	115944020	115944106	(22450611)	+	MIRb	SINE/MIR	172	260	(8)	4156415
1876	10.0	9.7	0.0	chr9	120580835	120581103	(17813614)	C	AluSc	SINE/Alu	(11)	298	1	4165285
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
2731	9.6	0.3	1.4	chr9	124110665	124111032	(14283685)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4171952
547	23.7	5.8	9.2	chr9	125931621	125931860	(12462857)	C	L2a	LINE/L2	(1)	3386	3125	4175536
397	27.0	1.9	2.6	chr9	125931866	125932021	(12462696)	C	L1ME4c	LINE/L1	(359)	471	317	4175537
215	37.1	4.0	10.9	chr9	125932220	125932540	(12462177)	+	L2c	LINE/L2	3090	3387	(0)	4175533
61	9.4	0.0	0.0	chr9	126082982	126083072	(12311645)	+	(TGTG)n	Simple_repeat	1	91	(0)	4175820
212	34.1	3.6	4.3	chr9	129139771	129139911	(9254806)	+	MIR3	SINE/MIR	1	140	(68)	4182167
22	14.7	1.7	5.1	chr9	129140780	129140837	(9253880)	+	G-rich	Low_complexity	1	59	(0)	4182168
241	30.4	19.2	1.5	chr9	129487644	129487780	(8906937)	+	MIRb	SINE/MIR	31	197	(71)	4182948
345	28.8	3.7	2.4	chr9	129487829	129487963	(8906754)	+	MIR1_Amn	SINE/MIR	3	151	(79)	4182949
21	14.1	3.3	4.8	chr9	129488103	129488162	(8906555)	+	(CACACT)n	Simple_repeat	1	62	(0)	4182950
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
255	22.9	1.6	1.6	chr9	129488970	129489031	(8905686)	C	MIR3	SINE/MIR	(66)	142	81	4182954
203	29.9	7.8	5.3	chr9	129489153	129489265	(8905452)	+	MIRc	SINE/MIR	88	203	(65)	4182955
2491	4.7	0.7	0.0	chr9	129489330	129489625	(8905092)	C	AluY	SINE/Alu	(11)	300	3	4182956
2478	8.6	0.0	0.0	chr9	129991655	129991958	(8402759)	C	AluY	SINE/Alu	(7)	304	1	4184055
1729	25.4	7.3	11.2	chr9	129991959	129992197	(8402520)	C	L2a	LINE/L2	(998)	2421	2179	4184050
4209	8.1	1.3	1.1	chr9	130150673	130151060	(8243657)	C	MER41A	LTR/ERV1	(166)	388	2	4184412
17	7.9	0.0	0.0	chr9	130151285	130151311	(8243406)	+	(AGGC)n	Simple_repeat	1	27	(0)	4184415
420	31.6	3.3	1.7	chrX	13059462	13059638	(142981257)	+	MER5A	DNA/hAT-Charlie	5	184	(5)	4380538
927	15.9	3.5	5.3	chrX	13248872	13249001	(142791894)	+	MER20	DNA/hAT-Charlie	16	152	(67)	4380876
3603	14.2	5.2	5.9	chrX	13249002	13249697	(142791198)	+	LTR8	LTR/ERV1	1	691	(0)	4380877
48	0.0	0.0	0.0	chrX	13471012	13471052	(142569843)	+	(TG)n	Simple_repeat	1	41	(0)	4381235
577	11.2	0.0	0.0	chrX	13471064	13471143	(142569752)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	4381236
1176	29.5	11.9	2.2	chrX	13471201	13472027	(142568868)	C	L2a	LINE/L2	(185)	3241	2330	4381237
45	2.4	0.0	0.0	chrX	19671372	19671414	(136369481)	+	(AC)n	Simple_repeat	1	43	(0)	4391752
578	30.4	7.2	0.5	chrX	29652692	29652886	(126388009)	+	MLT1H	LTR/ERVL-MaLR	338	546	(3)	4407087
7045	15.0	2.0	0.9	chrX	29660241	29661438	(126379457)	C	L1MA4	LINE/L1	(895)	5248	4031	4407097
1180	32.5	6.6	2.7	chrX	29661673	29662595	(126378300)	+	L2a	LINE/L2	2473	3426	(0)	4407102
305	30.1	8.8	6.7	chrX	45506421	45506630	(110534265)	C	MIRb	SINE/MIR	(41)	227	13	4430854
271	33.0	11.7	0.0	chrX	45517777	45517882	(110523013)	+	MIRc	SINE/MIR	7	126	(142)	4430875
215	28.1	1.5	0.0	chrX	45517945	45518008	(110522887)	+	MIR3	SINE/MIR	138	202	(6)	4430876
599	22.9	4.0	0.7	chrX	45709781	45709925	(110330970)	+	L2a	LINE/L2	3267	3416	(10)	4431102
15	15.4	2.0	7.7	chrX	45709927	45709977	(110330918)	+	GA-rich	Low_complexity	1	52	(0)	4431108
201	32.5	9.1	0.0	chrX	45709980	45710059	(110330836)	C	MIR3	SINE/MIR	(40)	168	81	4431109
212	30.8	6.2	2.1	chrX	49074455	49074547	(106966348)	+	L2b	LINE/L2	3097	3193	(182)	4437423
217	16.2	0.0	0.0	chrX	111681010	111681046	(44359849)	+	MIR	SINE/MIR	197	233	(29)	4510262
31	3.0	0.0	0.0	chrX	115732929	115732962	(40307933)	+	(GGCCC)n	Simple_repeat	1	34	(0)	4516069