741	18.7	4.3	0.0	chr1	30694	30848	(248925574)	+	MLT1A	LTR/ERVL-MaLR	1	162	(212)	24
55	13.0	0.0	3.1	chr1	30855	30952	(248925470)	+	(TC)n	Simple_repeat	1	98	(0)	25
741	24.9	0.0	1.1	chr1	30953	31131	(248925291)	+	MLT1A	LTR/ERVL-MaLR	173	349	(25)	24
1448	22.8	3.4	1.5	chr1	201208	201376	(248755046)	+	MLT1A	LTR/ERVL-MaLR	1	180	(194)	291
59	8.8	1.0	2.9	chr1	201377	201479	(248754943)	+	(TC)n	Simple_repeat	1	104	(0)	292
15	6.2	11.8	0.0	chr1	940285	940318	(248016104)	+	(GCC)n	Simple_repeat	1	38	(0)	1189
17	18.9	4.0	1.9	chr1	941911	941960	(248014462)	+	(CCG)n	Simple_repeat	1	52	(0)	1190
15	26.6	0.0	2.0	chr1	942055	942105	(248014317)	+	G-rich	Low_complexity	1	51	(0)	1191
47	11.7	6.6	3.9	chr1	975093	975214	(247981208)	+	GA-rich	Low_complexity	1	130	(0)	1216
12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
16	12.8	2.9	0.0	chr1	1435597	1435630	(247520792)	+	G-rich	Low_complexity	1	35	(0)	1740
19	14.9	0.0	0.0	chr1	1435695	1435731	(247520691)	+	(CGAG)n	Simple_repeat	1	37	(0)	1741
2016	12.1	2.3	1.7	chr1	1448773	1449070	(247507352)	C	AluSc8	SINE/Alu	(10)	301	2	1761
850	23.1	4.3	1.5	chr1	1449072	1449730	(247506692)	C	HERVIP10F-int	LTR/ERV1	(5834)	1903	734	1762
20	18.2	0.0	4.3	chr1	1497160	1497206	(247459216)	+	(CT)n	Simple_repeat	1	47	(0)	1838
1383	15.3	8.0	7.3	chr1	1497209	1497508	(247458914)	C	AluJr4	SINE/Alu	(10)	302	1	1839
816	15.7	1.6	0.0	chr1	1876332	1876452	(247079970)	C	AluJr	SINE/Alu	(56)	256	134	2530
24	12.3	1.6	7.9	chr1	1876458	1876519	(247079903)	+	GA-rich	Low_complexity	1	63	(0)	2531
16	24.6	4.7	1.5	chr1	1876492	1876555	(247079867)	+	(CGAG)n	Simple_repeat	1	67	(0)	2532
483	21.0	15.4	1.0	chr1	1876567	1876666	(247079756)	C	AluJo	SINE/Alu	(195)	117	1	2533
320	29.6	9.2	0.0	chr1	1883549	1883656	(247072766)	C	MIR	SINE/MIR	(32)	230	112	2554
515	16.3	0.0	5.2	chr1	1883669	1883765	(247072657)	+	LSU-rRNA_Hsa	rRNA	4192	4283	(752)	2555
31	30.6	1.2	6.2	chr1	2325081	2325240	(246631182)	+	(TCTT)n	Simple_repeat	1	162	(0)	3117
52	1.6	4.7	1.5	chr1	2325242	2325305	(246631117)	+	(CT)n	Simple_repeat	1	67	(0)	3118
1351	16.4	0.7	13.2	chr1	2325306	2325623	(246630799)	C	AluJr	SINE/Alu	(10)	302	25	3119
12	20.6	2.4	2.4	chr1	2392124	2392164	(246564258)	+	G-rich	Low_complexity	1	42	(0)	3177
16	9.3	0.0	0.0	chr1	3069702	3069724	(245886698)	+	(CT)n	Simple_repeat	1	23	(0)	3719
180	39.2	0.4	1.7	chr1	3321269	3322241	(245634181)	+	(TG)n	Simple_repeat	1	977	(0)	3910
103	24.2	3.0	0.4	chr1	3351525	3351795	(245604627)	+	(TCTC)n	Simple_repeat	1	279	(0)	3933
13	23.3	0.0	2.4	chr1	3352487	3352528	(245603894)	+	(CTTTC)n	Simple_repeat	1	42	(0)	3934
91	4.9	0.9	0.9	chr1	3908355	3908462	(245047960)	+	(TC)n	Simple_repeat	1	109	(0)	4542
609	12.9	0.8	4.9	chr1	5603296	5604518	(243351904)	+	(CT)n	Simple_repeat	1	1233	(0)	6982
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
17	16.1	3.9	3.7	chr1	6602163	6602214	(242354208)	+	(GCGGC)n	Simple_repeat	1	54	(0)	8522
195	32.1	4.5	4.5	chr1	6625797	6625907	(242330515)	+	L2a	LINE/L2	1829	1939	(1480)	8560
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
2399	8.1	0.0	0.3	chr1	8007006	8007302	(240949120)	C	AluSg	SINE/Alu	(14)	296	1	10751
47	0.0	0.0	0.0	chr1	8007443	8007482	(240948940)	+	(CT)n	Simple_repeat	1	40	(0)	10752
578	31.6	10.4	6.1	chr1	8042809	8043096	(240913326)	C	L1MEd	LINE/L1	(6265)	838	536	10800
53	0.0	0.0	0.0	chr1	8043097	8043141	(240913281)	+	(TC)n	Simple_repeat	1	45	(0)	10804
2190	11.4	0.0	0.3	chr1	8043143	8043432	(240912990)	C	AluSq	SINE/Alu	(24)	289	1	10805
658	18.7	8.3	1.6	chr1	8420185	8420307	(240536115)	+	FLAM_A	SINE/Alu	1	132	(10)	11597
464	27.5	5.4	5.8	chr1	8720284	8720461	(240235961)	C	L2a	LINE/L2	(49)	3377	3204	12110
37	22.9	1.2	0.0	chr1	8720492	8720577	(240235845)	+	GA-rich	Low_complexity	1	87	(0)	12112
47	23.3	2.4	1.6	chr1	8746812	8746937	(240209485)	+	GA-rich	Low_complexity	1	129	(0)	12168
2300	9.9	0.3	0.0	chr1	8822285	8822578	(240133844)	+	AluSq2	SINE/Alu	1	295	(18)	12317
99	1.0	1.9	0.9	chr1	8843970	8844072	(240112350)	+	(TTCT)n	Simple_repeat	1	105	(0)	12374
54	8.4	0.0	0.0	chr1	8844073	8844149	(240112273)	+	(CTCT)n	Simple_repeat	1	77	(0)	12375
1924	12.6	3.1	0.3	chr1	8844150	8844435	(240111987)	C	AluSx1	SINE/Alu	(18)	294	1	12376
15	8.2	12.7	3.2	chr1	8879289	8879343	(240077079)	+	(CGCCTG)n	Simple_repeat	1	62	(0)	12447
32	4.9	0.0	0.0	chr1	9309262	9309301	(239647121)	+	(GA)n	Simple_repeat	1	40	(0)	13343
38	0.0	0.0	0.0	chr1	9309302	9309334	(239647088)	+	(GT)n	Simple_repeat	1	33	(0)	13344
1355	14.4	0.0	0.5	chr1	9309338	9309532	(239646890)	C	AluJr	SINE/Alu	(32)	280	87	13345
349	22.2	1.1	0.0	chr1	9311387	9311476	(239644946)	C	L1MC5	LINE/L1	(12)	9292	9202	13350
2258	14.2	2.5	10.2	chr1	9763901	9764106	(239192316)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	221	14320
37	2.9	0.0	0.0	chr1	9764107	9764142	(239192280)	+	(AG)n	Simple_repeat	1	36	(0)	14321
2258	14.2	2.5	10.2	chr1	9764143	9764358	(239192064)	C	MSTB1	LTR/ERVL-MaLR	(212)	220	40	14320
1756	14.0	10.6	0.0	chr1	9809917	9810063	(239146359)	+	AluSz	SINE/Alu	161	311	(1)	14424
41	23.4	3.1	1.5	chr1	9810064	9810191	(239146231)	+	GA-rich	Low_complexity	1	130	(0)	14426
28	11.8	2.2	0.0	chr1	9846466	9846511	(239109911)	+	(AG)n	Simple_repeat	1	47	(0)	14500
42	21.4	0.0	0.0	chr1	10194431	10194516	(238761906)	+	GA-rich	Low_complexity	1	86	(0)	15299
2330	10.8	0.3	0.7	chr1	10480388	10480694	(238475728)	C	AluSx1	SINE/Alu	(6)	306	1	15899
675	22.3	7.3	6.5	chr1	10480695	10480827	(238475595)	C	L1MC4	LINE/L1	(0)	8042	7913	15900
33	3.1	0.0	0.0	chr1	10480828	10480860	(238475562)	+	(TC)n	Simple_repeat	1	33	(0)	15901
675	24.1	8.5	6.3	chr1	10480861	10481118	(238475304)	C	L1MC4	LINE/L1	(130)	7912	7721	15900
72	23.0	1.2	0.0	chr1	10699942	10700113	(238256309)	+	(GAGACA)n	Simple_repeat	1	174	(0)	16230
34	0.0	0.0	0.0	chr1	10700081	10700117	(238256305)	+	(AC)n	Simple_repeat	1	37	(0)	16231
42	4.0	3.9	0.0	chr1	10789525	10789576	(238166846)	+	(TC)n	Simple_repeat	1	54	(0)	16343
30	9.6	2.2	0.0	chr1	10791724	10791769	(238164653)	+	(AG)n	Simple_repeat	1	47	(0)	16344
27	15.3	3.5	0.0	chr1	10796378	10796435	(238159987)	+	(CGCT)n	Simple_repeat	1	60	(0)	16351
337	29.1	16.0	4.3	chr1	10833687	10833873	(238122549)	C	L2c	LINE/L2	(1)	3425	3213	16433
27	29.9	1.5	9.7	chr1	10865898	10866161	(238090261)	+	A-rich	Low_complexity	1	268	(0)	16491
42	24.6	9.9	1.7	chr1	10865899	10866160	(238090262)	+	GA-rich	Low_complexity	1	288	(0)	16492
413	28.9	8.0	0.7	chr1	10962466	10962552	(237993870)	+	MER102b	DNA/hAT-Charlie	96	182	(159)	16709
670	28.6	6.4	0.0	chr1	10962644	10962832	(237993590)	+	MIR	SINE/MIR	51	252	(10)	16711
954	17.8	1.9	0.0	chr1	10987857	10988008	(237968414)	+	AluJb	SINE/Alu	158	312	(0)	16777
34	8.7	0.0	2.0	chr1	10988009	10988055	(237968367)	+	(GA)n	Simple_repeat	1	47	(0)	16778
53	3.6	0.0	0.0	chr1	10988056	10988112	(237968310)	+	(AGGA)n	Simple_repeat	1	57	(0)	16779
763	18.6	0.8	0.0	chr1	11561721	11561844	(237394578)	+	AluJo	SINE/Alu	1	125	(187)	17938
70	16.2	2.1	1.4	chr1	11561853	11561984	(237394438)	+	GA-rich	Low_complexity	8	142	(0)	17939
840	17.5	8.3	2.9	chr1	11561986	11562156	(237394266)	+	AluJo	SINE/Alu	120	300	(12)	17940
64	17.1	0.5	9.1	chr1	11972166	11972250	(236984172)	+	(TTCC)n	Simple_repeat	1	76	(0)	18870
2140	12.0	3.2	0.3	chr1	11972251	11972551	(236983871)	C	AluSq2	SINE/Alu	(3)	310	1	18871
1066	9.0	0.0	0.0	chr1	12113341	12113473	(236842949)	C	AluSz	SINE/Alu	(179)	133	1	19190
160	16.9	0.0	0.0	chr1	12113485	12113768	(236842654)	+	GA-rich	Low_complexity	1	284	(0)	19191
545	25.4	8.1	2.5	chr1	12113770	12113996	(236842426)	C	MLT1G3	LTR/ERVL-MaLR	(345)	234	1	19189
33	3.1	0.0	0.0	chr1	12433918	12433950	(236522472)	+	(GA)n	Simple_repeat	1	33	(0)	19789
18	0.0	0.0	0.0	chr1	12433951	12433970	(236522452)	+	(TG)n	Simple_repeat	1	20	(0)	19790
14	0.0	0.0	0.0	chr1	12433970	12433987	(236522435)	+	(GGA)n	Simple_repeat	1	18	(0)	19791
185	27.5	12.5	1.1	chr1	12604654	12604745	(236351677)	+	MIRb	SINE/MIR	14	117	(151)	20069
18	19.8	0.0	4.0	chr1	12618036	12618085	(236338337)	+	(CGCT)n	Simple_repeat	1	50	(0)	20096
2509	7.0	0.0	1.3	chr1	13481380	13481694	(235474728)	C	AluY	SINE/Alu	(0)	311	1	21481
906	19.7	0.9	9.5	chr1	13481698	13481762	(235474660)	+	MLT1B	LTR/ERVL-MaLR	145	188	(186)	21478
59	4.9	0.0	0.0	chr1	13481763	13481826	(235474596)	+	(CT)n	Simple_repeat	1	64	(0)	21482
948	19.4	0.6	0.3	chr1	13481827	13482012	(235474410)	+	MLT1B	LTR/ERVL-MaLR	189	386	(4)	21478
2269	12.5	3.3	2.2	chr1	14477045	14477404	(234479018)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	23255
49	5.8	0.0	0.0	chr1	14477426	14477480	(234478942)	+	(CT)n	Simple_repeat	1	55	(0)	23256
64	29.3	3.5	2.4	chr1	15101098	15101385	(233855037)	+	(TTCTCT)n	Simple_repeat	1	298	(0)	24542
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
2015	16.3	1.6	0.0	chr1	15745240	15745545	(233210877)	+	AluSz6	SINE/Alu	2	312	(0)	25926
1575	11.9	1.0	19.9	chr1	15745546	15745610	(233210812)	C	AluJo	SINE/Alu	(201)	111	112	25925
2337	9.9	1.9	0.3	chr1	15745611	15745913	(233210509)	+	AluSq2	SINE/Alu	1	308	(5)	25927
525	26.9	7.3	0.8	chr1	15758112	15758311	(233198111)	C	MIRb	SINE/MIR	(8)	254	33	25955
23	19.7	0.0	5.6	chr1	15758465	15758535	(233197887)	+	(CCCCATT)n	Simple_repeat	1	71	(0)	25956
2041	16.7	0.0	1.0	chr1	16615322	16615632	(232340790)	+	AluJb	SINE/Alu	2	309	(3)	27822
1008	16.9	12.1	0.8	chr1	16615738	16615994	(232340428)	+	L1ME2z	LINE/L1	5890	6179	(265)	27815
508	29.9	5.3	8.7	chr1	16903668	16904000	(232052422)	+	LTR23-int	LTR/ERV1	4727	5047	(76)	28224
2329	4.2	0.3	1.4	chr1	16904026	16904310	(232052112)	C	AluYc3	SINE/Alu	(18)	282	1	28225
386	30.3	11.6	5.9	chr1	17121462	17121647	(231834775)	C	MIR	SINE/MIR	(0)	262	65	28725
525	21.9	3.2	0.0	chr1	17144608	17144726	(231811696)	+	MIR	SINE/MIR	86	208	(54)	28784
32	3.2	0.0	0.0	chr1	17144794	17144825	(231811597)	+	(CT)n	Simple_repeat	1	32	(0)	28785
18	0.0	0.0	0.0	chr1	17144826	17144845	(231811577)	+	(GT)n	Simple_repeat	1	20	(0)	28786
536	26.4	1.6	0.0	chr1	17144875	17144995	(231811427)	+	MER20	DNA/hAT-Charlie	95	217	(2)	28787
13	24.8	0.0	0.0	chr1	17597106	17597143	(231359279)	+	(CTGCAT)n	Simple_repeat	1	38	(0)	29820
1132	30.7	3.4	4.3	chr1	17787571	17788105	(231168317)	C	L1ME3G	LINE/L1	(354)	570	36	30230
147	22.7	1.3	0.0	chr1	18020546	18020862	(230935560)	+	(TC)n	Simple_repeat	1	321	(0)	30756
33	0.0	0.0	0.0	chr1	18095527	18095554	(230860868)	+	(CT)n	Simple_repeat	1	28	(0)	30917
804	27.4	2.9	12.4	chr1	18187033	18187316	(230769106)	C	MLT1A1	LTR/ERVL-MaLR	(17)	391	117	31120
1934	16.5	3.3	3.0	chr1	18187317	18187679	(230768743)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	31121
47	13.1	6.4	0.0	chr1	18205102	18205195	(230751227)	+	GA-rich	Low_complexity	1	100	(0)	31156
238	23.9	5.8	2.6	chr1	18205203	18205318	(230751104)	+	L1ME4a	LINE/L1	5995	6114	(10)	31157
11	22.8	6.9	3.9	chr1	18956346	18956417	(230000005)	+	(GGCCCCG)n	Simple_repeat	1	77	(0)	32774
11	3.8	6.5	6.1	chr1	19311939	19311969	(229644453)	+	(GGCGC)n	Simple_repeat	1	33	(0)	33409
15	8.5	0.0	0.0	chr1	19644743	19644767	(229311655)	+	(GGGA)n	Simple_repeat	1	25	(0)	34117
13	27.8	1.7	3.3	chr1	19644774	19644833	(229311589)	+	(GGCCG)n	Simple_repeat	1	61	(0)	34118
2289	10.3	2.3	0.0	chr1	19797589	19797889	(229158533)	+	AluSx4	SINE/Alu	1	308	(2)	34503
44	13.1	1.3	0.0	chr1	19797890	19797956	(229158466)	+	(GAGA)n	Simple_repeat	1	67	(0)	34504
69	0.0	0.0	0.0	chr1	19797957	19798018	(229158404)	+	(AGAAA)n	Simple_repeat	1	62	(0)	34505
44	13.1	1.3	0.0	chr1	19798019	19798029	(229158393)	+	(GAGA)n	Simple_repeat	4	15	(0)	34506
15	18.2	0.0	4.9	chr1	19882621	19882661	(229073761)	+	(GCG)n	Simple_repeat	1	41	(0)	34717
81	21.9	3.1	2.2	chr1	20291329	20291551	(228664871)	+	(CT)n	Simple_repeat	1	230	(0)	35456
29	25.9	2.4	4.0	chr1	20787240	20787362	(228169060)	+	(CGCCGC)n	Simple_repeat	1	126	(0)	36557
3439	16.6	4.1	0.5	chr1	20964619	20965222	(227991200)	+	MER73	LTR/ERVL	1	627	(17)	36880
380	27.4	4.2	0.0	chr1	20965379	20965491	(227990931)	+	MER94	DNA/hAT-Blackjack	16	133	(1)	36881
13	27.9	2.1	0.0	chr1	21937482	21937529	(227018893)	+	(GGCCCGC)n	Simple_repeat	1	49	(0)	38998
18	19.4	0.0	6.7	chr1	21937554	21937613	(227018809)	+	G-rich	Low_complexity	1	60	(0)	38999
2233	9.9	0.0	0.0	chr1	22024622	22024905	(226931517)	C	AluSx1	SINE/Alu	(27)	285	2	39247
57	0.0	0.0	0.0	chr1	22254161	22254209	(226702213)	+	(GT)n	Simple_repeat	1	49	(0)	39745
44	9.1	2.8	1.4	chr1	22254210	22254281	(226702141)	+	(AG)n	Simple_repeat	1	74	(0)	39746
244	32.4	6.9	1.8	chr1	22254311	22254420	(226702002)	C	MIR3	SINE/MIR	(50)	158	43	39747
416	24.4	2.4	1.3	chr1	22547048	22548201	(226408221)	+	(TC)n	Simple_repeat	1	1182	(0)	40364
17	7.3	3.5	0.0	chr1	22563452	22563480	(226392942)	+	(CGG)n	Simple_repeat	1	30	(0)	40400
399	31.7	0.0	1.4	chr1	22819040	22819183	(226137239)	+	MIR3	SINE/MIR	53	194	(14)	41012
53	0.0	0.0	0.0	chr1	22819206	22819250	(226137172)	+	(TC)n	Simple_repeat	1	45	(0)	41013
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
19	24.5	0.0	1.8	chr1	23019614	23019668	(225936754)	+	(GGC)n	Simple_repeat	1	55	(0)	41476
2281	12.2	0.0	0.0	chr1	24192235	24192545	(224763877)	+	AluSq	SINE/Alu	1	311	(2)	44339
20	0.0	0.0	0.0	chr1	24192584	24192605	(224763817)	+	(TG)n	Simple_repeat	1	22	(0)	44340
34	7.2	0.0	0.0	chr1	24192605	24192649	(224763773)	+	(GA)n	Simple_repeat	1	45	(0)	44341
2027	10.5	5.2	1.7	chr1	24194592	24194885	(224761537)	C	AluSx	SINE/Alu	(7)	305	1	44348
33	3.1	0.0	0.0	chr1	24194913	24194945	(224761477)	+	(GT)n	Simple_repeat	1	33	(0)	44349
24	12.2	0.0	0.0	chr1	24194946	24194981	(224761441)	+	(AG)n	Simple_repeat	1	36	(0)	44350
1957	15.1	3.7	4.2	chr1	24195070	24195450	(224760972)	C	Tigger2a	DNA/TcMar-Tigger	(51)	383	5	44351
1765	12.3	2.9	4.6	chr1	24427974	24428258	(224528164)	+	AluJb	SINE/Alu	11	290	(22)	44872
53	0.0	0.0	0.0	chr1	24428259	24428303	(224528119)	+	(AG)n	Simple_repeat	1	45	(0)	44873
3578	13.0	4.3	4.6	chr1	24428304	24428781	(224527641)	+	MER39B	LTR/ERV1	178	652	(1)	44871
1418	17.0	10.6	0.4	chr1	24526110	24526362	(224430060)	C	AluJr	SINE/Alu	(30)	282	1	45097
44	2.3	0.0	0.0	chr1	25601393	25601437	(223354985)	+	(CTTC)n	Simple_repeat	1	45	(0)	47481
71	13.7	2.6	3.2	chr1	25601451	25601601	(223354821)	+	(TCTT)n	Simple_repeat	1	155	(0)	47482
50	6.2	5.6	3.2	chr1	25678972	25679061	(223277361)	+	(AG)n	Simple_repeat	1	95	(0)	47617
339	32.6	10.7	2.0	chr1	25679088	25679334	(223277088)	+	L3	LINE/CR1	2164	2434	(1665)	47618
50	0.0	0.0	0.0	chr1	25819388	25819430	(223136992)	+	(GT)n	Simple_repeat	1	43	(0)	47891
1110	16.6	0.0	0.0	chr1	26082459	26082621	(222873801)	+	FRAM	SINE/Alu	2	164	(12)	48516
677	25.1	2.4	9.8	chr1	26082622	26082677	(222873745)	+	MIRb	SINE/MIR	204	254	(14)	48515
1561	13.8	4.2	1.6	chr1	26082678	26082703	(222873719)	C	AluJr	SINE/Alu	(12)	300	275	48517
53	2.0	0.0	0.0	chr1	26082704	26082753	(222873669)	+	(CT)n	Simple_repeat	1	50	(0)	48518
1561	13.8	4.2	1.6	chr1	26082754	26082980	(222873442)	C	AluJr	SINE/Alu	(48)	264	40	48517
21	25.8	1.2	4.7	chr1	26164344	26164428	(222791994)	+	(CGC)n	Simple_repeat	1	86	(0)	48725
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
1949	11.6	0.0	4.6	chr1	26512013	26512297	(222444125)	+	AluSq2	SINE/Alu	3	274	(39)	49543
62	1.8	0.0	0.0	chr1	26512298	26512354	(222444068)	+	(CT)n	Simple_repeat	1	57	(0)	49544
47	2.3	0.0	0.0	chr1	26512357	26512401	(222444021)	+	(AC)n	Simple_repeat	1	45	(0)	49545
70	0.0	0.0	0.0	chr1	26868249	26868308	(222088114)	+	(TC)n	Simple_repeat	1	60	(0)	50334
1193	15.6	2.7	0.6	chr1	26989687	26989854	(221966568)	C	AluSx	SINE/Alu	(11)	301	129	50651
2279	10.4	0.0	4.3	chr1	26989858	26989873	(221966549)	C	AluSx	SINE/Alu	(0)	312	297	50653
44	7.2	6.7	1.0	chr1	26989874	26989963	(221966459)	+	(TC)n	Simple_repeat	1	96	(0)	50654
2279	10.4	0.0	4.3	chr1	26989964	26990135	(221966287)	C	AluSx	SINE/Alu	(16)	296	135	50653
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
16	8.3	0.0	0.0	chr1	27529236	27529261	(221427161)	+	(CCTC)n	Simple_repeat	1	26	(0)	51968
19	8.2	0.0	0.0	chr1	27534636	27534661	(221421761)	+	(CT)n	Simple_repeat	1	26	(0)	51984
12	18.1	3.1	0.0	chr1	27534651	27534682	(221421740)	+	(TCTTTT)n	Simple_repeat	1	33	(0)	51985
74	16.8	0.0	0.0	chr1	27974256	27974389	(220982033)	+	GA-rich	Low_complexity	1	134	(0)	52979
849	18.2	0.0	0.0	chr1	28191453	28191584	(220764838)	+	FLAM_C	SINE/Alu	2	133	(10)	53503
35	0.0	0.0	0.0	chr1	28191587	28191616	(220764806)	+	(AG)n	Simple_repeat	1	30	(0)	53504
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
13	20.6	2.4	2.4	chr1	28518618	28518658	(220437764)	+	(GCGG)n	Simple_repeat	1	42	(0)	54411
183	21.1	7.8	7.8	chr1	28668526	28668602	(220287820)	+	MIR3	SINE/MIR	116	192	(16)	54843
19	8.9	2.6	2.6	chr1	28668793	28668830	(220287592)	+	(CGCC)n	Simple_repeat	1	39	(0)	54844
726	20.8	4.2	12.6	chr1	28846258	28846452	(220109970)	C	MLT1A	LTR/ERVL-MaLR	(13)	415	184	55302
2088	8.5	0.0	0.0	chr1	28846453	28846711	(220109711)	+	AluSx1	SINE/Alu	53	311	(1)	55303
726	20.5	4.0	13.0	chr1	28846712	28846778	(220109644)	C	MLT1A	LTR/ERVL-MaLR	(191)	183	124	55302
249	28.0	16.7	0.0	chr1	28861060	28861159	(220095263)	+	MIR3	SINE/MIR	77	196	(12)	55339
51	0.0	0.0	0.0	chr1	28873772	28873815	(220082607)	+	(CT)n	Simple_repeat	1	44	(0)	55368
13	8.9	0.0	3.9	chr1	28914599	28914624	(220041798)	+	(TCGC)n	Simple_repeat	1	26	(0)	55498
96	19.2	0.4	4.0	chr1	29365171	29365396	(219591026)	+	(TCCT)n	Simple_repeat	1	227	(0)	56472
70	1.5	1.5	0.0	chr1	29365399	29365466	(219590956)	+	(TC)n	Simple_repeat	1	69	(0)	56473
2324	13.0	2.8	0.3	chr1	30401568	30401922	(218554500)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	58358
54	5.2	0.0	0.0	chr1	30401938	30401997	(218554425)	+	(TC)n	Simple_repeat	1	60	(0)	58359
20	9.8	0.0	0.0	chr1	30401999	30402031	(218554391)	+	(CCCT)n	Simple_repeat	1	33	(0)	58360
269	31.0	11.7	0.0	chr1	30807734	30807862	(218148560)	C	MIR	SINE/MIR	(0)	262	117	59120
38	0.0	0.0	0.0	chr1	31005792	31005824	(217950598)	+	(AG)n	Simple_repeat	1	33	(0)	59549
35	25.5	1.9	1.9	chr1	31031861	31031963	(217924459)	+	(CT)n	Simple_repeat	1	105	(0)	59594
2276	10.4	0.0	0.0	chr1	31060179	31060466	(217895956)	+	AluSx1	SINE/Alu	1	288	(24)	59670
1762	13.3	1.6	6.8	chr1	31232391	31232424	(217723998)	C	AluJr	SINE/Alu	(179)	133	112	60196
56	0.0	0.0	0.0	chr1	31232425	31232472	(217723950)	+	(AG)n	Simple_repeat	1	48	(0)	60198
1762	13.3	1.6	6.8	chr1	31232473	31232588	(217723834)	C	AluJr	SINE/Alu	(201)	111	1	60196
19	20.2	1.9	1.9	chr1	31239829	31239881	(217716541)	+	(GCGCGGA)n	Simple_repeat	1	54	(0)	60222
15	16.9	0.0	0.0	chr1	31239862	31239894	(217716528)	+	(AGCGC)n	Simple_repeat	1	33	(0)	60223
263	24.6	13.5	2.4	chr1	31334061	31334185	(217622237)	+	Helitron3Na_Mam	RC/Helitron	62	202	(284)	60446
31	0.0	0.0	0.0	chr1	31334304	31334337	(217622085)	+	(TC)n	Simple_repeat	1	34	(0)	60447
26	18.6	1.8	1.7	chr1	31580030	31580086	(217376336)	+	(TG)n	Simple_repeat	1	58	(0)	60942
100	4.0	0.0	0.0	chr1	31580163	31580265	(217376157)	+	(CT)n	Simple_repeat	1	103	(0)	60943
243	20.9	7.4	0.0	chr1	31788876	31788957	(217167465)	C	MIRc	SINE/MIR	(54)	176	83	61315
265	22.6	1.6	4.6	chr1	31842878	31842942	(217113480)	+	LTR88c	LTR/Gypsy?	668	730	(132)	61443
46	0.0	0.0	0.0	chr1	31842946	31842984	(217113438)	+	(CT)n	Simple_repeat	1	39	(0)	61444
952	17.1	1.2	1.8	chr1	31904787	31904950	(217051472)	C	FAM	SINE/Alu	(21)	164	2	61601
416	32.4	10.5	2.4	chr1	31904982	31905190	(217051232)	C	L2a	LINE/L2	(2138)	1281	1054	61592
438	25.8	5.0	3.0	chr1	31935484	31935635	(217020787)	+	MIRb	SINE/MIR	3	144	(118)	61644
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
53	3.8	0.0	0.0	chr1	32251890	32251943	(216704479)	+	(GA)n	Simple_repeat	1	54	(0)	62406
1608	16.9	5.7	0.0	chr1	32272307	32272573	(216683849)	+	AluJo	SINE/Alu	1	283	(29)	62486
78	5.0	0.0	0.0	chr1	32272574	32272657	(216683765)	+	(AG)n	Simple_repeat	1	84	(0)	62487
391	31.4	0.7	7.3	chr1	32272658	32272749	(216683673)	C	L2c	LINE/L2	(313)	3074	2989	62485
225	28.2	1.0	1.0	chr1	32272759	32273434	(216682988)	+	(TG)n	Simple_repeat	1	683	(0)	62488
316	28.6	12.2	7.8	chr1	32309117	32309359	(216647063)	C	L2c	LINE/L2	(1)	3386	3132	62579
936	19.9	0.0	4.4	chr1	32309366	32309404	(216647018)	C	FAM	SINE/Alu	(0)	185	150	62588
2355	9.6	1.9	0.0	chr1	32309405	32309705	(216646717)	+	AluSx1	SINE/Alu	1	307	(5)	62589
34002	7.4	6.1	4.9	chr1	32447430	32448197	(216508225)	C	HERVIP10FH-int	LTR/ERV1	(3988)	1114	214	62853
15	0.0	0.0	0.0	chr1	32500491	32500509	(216455913)	+	(GGC)n	Simple_repeat	1	19	(0)	62988
14	15.6	2.1	6.1	chr1	32500510	32500535	(216455887)	+	G-rich	Low_complexity	4	49	(0)	62989
12	24.8	0.0	0.0	chr1	32500698	32500731	(216455691)	+	(CCGG)n	Simple_repeat	1	34	(0)	62990
13	10.5	6.5	0.0	chr1	32539961	32539991	(216416431)	+	G-rich	Low_complexity	1	33	(0)	63101
9211	20.1	5.6	6.1	chr1	32923851	32926332	(216030090)	C	HERVS71-int	LTR/ERV1	(6507)	2471	4	64043
44	24.0	4.7	2.8	chr1	32964394	32964565	(215991857)	+	(CCGCGG)n	Simple_repeat	1	180	(0)	64113
24	25.4	3.8	0.0	chr1	32964720	32964798	(215991624)	+	(CGC)n	Simple_repeat	1	82	(0)	64114
37	0.0	0.0	0.0	chr1	33455914	33455945	(215500477)	+	(AG)n	Simple_repeat	1	32	(0)	65138
46	0.0	0.0	0.0	chr1	34169597	34169635	(214786787)	+	(GA)n	Simple_repeat	1	39	(0)	66337
127	13.3	0.0	0.0	chr1	34247416	34247613	(214708809)	+	(GA)n	Simple_repeat	1	198	(0)	66503
1676	16.1	7.5	0.0	chr1	34247614	34247874	(214708548)	C	AluJb	SINE/Alu	(30)	282	1	66504
284	21.1	4.1	1.4	chr1	34271127	34271198	(214685224)	+	MIR	SINE/MIR	39	112	(150)	66536
49	4.0	0.0	0.0	chr1	34271206	34271256	(214685166)	+	(TC)n	Simple_repeat	1	51	(0)	66537
420	30.1	7.0	3.6	chr1	34271345	34271565	(214684857)	C	L4_C_Mam	LINE/RTE-X	(4282)	856	628	66535
44	4.4	0.0	0.0	chr1	34603290	34603336	(214353086)	+	(GA)n	Simple_repeat	1	47	(0)	67065
442	25.7	20.1	0.0	chr1	34603374	34603556	(214352866)	+	MIRb	SINE/MIR	16	244	(24)	67066
2077	10.5	2.0	0.3	chr1	34838826	34839120	(214117302)	+	AluSg	SINE/Alu	1	300	(10)	67515
84	15.5	6.5	3.8	chr1	34839122	34839369	(214117053)	+	GA-rich	Low_complexity	1	264	(0)	67516
1767	12.0	9.2	0.4	chr1	35124793	35125059	(213831363)	C	AluSq2	SINE/Alu	(19)	294	2	68091
1390	21.2	8.5	8.0	chr1	35125060	35125161	(213831261)	C	L1MEc	LINE/L1	(4117)	2283	2192	68086
2281	8.8	0.0	1.0	chr1	35125162	35125457	(213830965)	+	AluSc	SINE/Alu	1	293	(16)	68092
10004	6.8	5.1	2.0	chr1	35147887	35148203	(213808219)	C	Harlequin-int	LTR/ERV1	(5497)	1399	1061	68110
29	0.0	0.0	0.0	chr1	35148204	35148228	(213808194)	+	(TC)n	Simple_repeat	1	25	(0)	68112
10004	6.8	5.1	2.0	chr1	35148229	35149263	(213807159)	C	Harlequin-int	LTR/ERV1	(5836)	1060	2	68110
73	26.1	1.8	2.7	chr1	35280086	35280306	(213676116)	+	(TTTC)n	Simple_repeat	1	225	(0)	68445
979	16.9	0.6	1.2	chr1	35406374	35406539	(213549883)	+	AluJo	SINE/Alu	137	301	(11)	68724
22	7.4	0.0	0.0	chr1	35688973	35689001	(213267421)	+	(AG)n	Simple_repeat	1	29	(0)	69245
1985	13.5	0.0	5.5	chr1	35701183	35701494	(213254928)	C	AluJo	SINE/Alu	(16)	296	2	69285
1078	23.1	2.6	16.5	chr1	35701495	35701564	(213254858)	C	L1MC4	LINE/L1	(359)	7683	7635	69283
36	0.0	0.0	0.0	chr1	35701565	35701595	(213254827)	+	(TC)n	Simple_repeat	1	31	(0)	69286
1078	23.1	2.6	16.5	chr1	35701596	35701638	(213254784)	C	L1MC4	LINE/L1	(408)	7634	7634	69283
1341	15.2	1.5	0.5	chr1	35701639	35701842	(213254580)	C	AluJr	SINE/Alu	(106)	206	1	69287
13	11.6	12.2	1.8	chr1	35883203	35883251	(213073171)	+	(CTGGCAG)n	Simple_repeat	1	55	(0)	69699
21	12.9	2.3	2.2	chr1	35883255	35883298	(213073124)	+	(GCG)n	Simple_repeat	1	45	(0)	69700
212	18.0	5.7	0.0	chr1	36149927	36149976	(212806446)	C	L2a	LINE/L2	(5)	3421	3369	70236
801	14.2	0.0	0.8	chr1	36151241	36151368	(212805054)	+	AluJb	SINE/Alu	1	127	(185)	70238
16	0.0	0.0	0.0	chr1	36156365	36156384	(212800038)	+	(GCC)n	Simple_repeat	1	20	(0)	70248
19	11.5	2.5	2.4	chr1	36157018	36157057	(212799365)	+	GA-rich	Low_complexity	1	41	(0)	70249
13	34.7	0.0	0.0	chr1	36157095	36157152	(212799270)	+	G-rich	Low_complexity	1	58	(0)	70250
17	27.5	5.3	2.0	chr1	36282588	36282682	(212673740)	+	(TCTCGA)n	Simple_repeat	1	100	(0)	70576
3656	16.0	4.2	0.6	chr1	36465010	36465694	(212490728)	+	MER67C	LTR/ERV1	1	711	(0)	70936
42	15.8	5.3	1.0	chr1	36760648	36760742	(212195680)	+	GA-rich	Low_complexity	1	100	(0)	71520
395	24.7	7.3	1.2	chr1	36760745	36760912	(212195510)	+	MLT1K	LTR/ERVL-MaLR	400	578	(17)	71521
42	2.4	0.0	0.0	chr1	37014835	37014877	(211941545)	+	(TCTTT)n	Simple_repeat	1	43	(0)	71953
50	9.6	1.3	0.0	chr1	37014885	37014962	(211941460)	+	(TC)n	Simple_repeat	1	79	(0)	71954
55	0.0	0.0	0.0	chr1	37190720	37190766	(211765656)	+	(CT)n	Simple_repeat	1	47	(0)	72269
38	8.4	0.0	0.0	chr1	37300220	37300270	(211656152)	+	(TC)n	Simple_repeat	1	51	(0)	72453
890	19.9	8.7	7.3	chr1	37441909	37442238	(211514184)	+	LTR37B	LTR/ERV1	134	468	(0)	72739
292	23.4	0.9	0.1	chr1	37442350	37443025	(211513397)	+	(CTCT)n	Simple_repeat	1	682	(0)	72740
1229	13.0	0.1	2.1	chr1	37446218	37446422	(211510000)	+	THE1D	LTR/ERVL-MaLR	177	381	(0)	72745
37	32.3	0.7	1.4	chr1	37474624	37474766	(211481656)	+	GA-rich	Low_complexity	1	144	(0)	72810
12	16.0	0.0	3.3	chr1	37514529	37514558	(211441864)	+	(CGCCG)n	Simple_repeat	1	30	(0)	72894
903	21.2	0.0	2.4	chr1	37850317	37850486	(211105936)	+	AluJr4	SINE/Alu	137	302	(10)	73571
16	18.9	0.0	6.1	chr1	37850501	37850549	(211105873)	+	GA-rich	Low_complexity	1	49	(0)	73572
32	3.2	0.0	0.0	chr1	37850558	37850589	(211105833)	+	(GA)n	Simple_repeat	1	32	(0)	73573
42	4.7	0.0	0.0	chr1	38040457	38040501	(210915921)	+	(GT)n	Simple_repeat	1	45	(0)	73962
27	0.0	0.0	0.0	chr1	38040502	38040531	(210915891)	+	(AG)n	Simple_repeat	1	30	(0)	73963
31	0.0	0.0	3.2	chr1	38136071	38136101	(210820321)	+	(TC)n	Simple_repeat	1	31	(0)	74148
202	21.7	1.3	3.4	chr1	38267534	38268061	(210688361)	+	(TCCC)n	Simple_repeat	1	535	(0)	74396
732	23.3	10.4	4.9	chr1	38785727	38786230	(210170192)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	1	75330
7609	12.6	3.2	2.5	chr1	38968601	38969498	(209986924)	C	Tigger2	DNA/TcMar-Tigger	(664)	2054	1144	75738
28	8.1	7.4	1.7	chr1	39025885	39025938	(209930484)	+	(CT)n	Simple_repeat	1	58	(0)	75885
1846	14.9	0.4	2.1	chr1	39025943	39026230	(209930192)	C	AluJb	SINE/Alu	(29)	283	1	75886
2701	3.3	0.7	0.3	chr1	39101895	39102193	(209854229)	+	AluYe5	SINE/Alu	1	301	(9)	76095
31	3.3	0.0	0.0	chr1	39102194	39102224	(209854198)	+	(AG)n	Simple_repeat	1	31	(0)	76096
22	11.1	0.0	2.3	chr1	39102232	39102242	(209854180)	+	(GAAA)n	Simple_repeat	3	13	(0)	76097
600	29.6	8.9	5.0	chr1	39102245	39102567	(209853855)	C	L2b	LINE/L2	(15)	3360	3024	76098
349	28.8	6.7	1.8	chr1	39170638	39170750	(209785672)	C	L2a	LINE/L2	(4)	3422	3304	76232
53	0.0	0.0	0.0	chr1	39186171	39186215	(209770207)	+	(TC)n	Simple_repeat	1	45	(0)	76255
29	0.0	0.0	0.0	chr1	39186216	39186247	(209770175)	+	(GT)n	Simple_repeat	1	32	(0)	76256
1275	6.8	1.2	1.2	chr1	39186269	39186430	(209769992)	C	AluSc5	SINE/Alu	(13)	296	135	76257
493	13.6	0.0	0.0	chr1	39187726	39187791	(209768631)	C	AluJr	SINE/Alu	(187)	125	60	76260
57	3.4	1.6	0.0	chr1	39187849	39187909	(209768513)	+	(TC)n	Simple_repeat	1	62	(0)	76261
49	15.2	3.0	1.0	chr1	39187910	39188010	(209768412)	+	(CTTCC)n	Simple_repeat	1	104	(0)	76262
532	28.3	8.9	1.6	chr1	39193571	39193757	(209762665)	C	MIRb	SINE/MIR	(23)	245	44	76277
30	3.5	0.0	0.0	chr1	39193781	39193810	(209762612)	+	(AG)n	Simple_repeat	1	30	(0)	76278
15	19.9	0.0	0.0	chr1	39901704	39901738	(209054684)	+	G-rich	Low_complexity	1	35	(0)	77652
34	0.0	0.0	0.0	chr1	40374597	40374625	(208581797)	+	(GT)n	Simple_repeat	1	29	(0)	78696
16	9.4	10.6	1.9	chr1	40374626	40374672	(208581750)	+	GA-rich	Low_complexity	1	52	(0)	78697
18	17.0	1.7	6.6	chr1	40783671	40783730	(208172692)	+	(CGCT)n	Simple_repeat	1	61	(0)	79495
805	25.1	11.1	1.7	chr1	41114323	41114671	(207841751)	C	L1MEd	LINE/L1	(1285)	4861	4476	80206
2127	12.8	0.0	1.0	chr1	41114684	41114979	(207841443)	C	AluSz	SINE/Alu	(19)	293	1	80207
47	0.0	2.3	0.0	chr1	41394160	41394203	(207562219)	+	(AG)n	Simple_repeat	1	45	(0)	80727
13	25.9	0.0	4.0	chr1	41482627	41482676	(207473746)	+	A-rich	Low_complexity	1	50	(0)	80896
390	28.2	3.7	5.2	chr1	41516381	41516571	(207439851)	+	L2a	LINE/L2	2485	2672	(747)	80956
33	9.2	3.5	0.0	chr1	41854108	41854165	(207102257)	+	(TC)n	Simple_repeat	1	60	(0)	81575
57	1.9	0.0	0.0	chr1	41897929	41897981	(207058441)	+	(GA)n	Simple_repeat	1	53	(0)	81643
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
1783	14.5	4.2	0.7	chr1	42360126	42360401	(206596021)	+	AluJb	SINE/Alu	2	287	(25)	82368
50	0.0	0.0	0.0	chr1	42360402	42360444	(206595978)	+	(AG)n	Simple_repeat	1	43	(0)	82369
17	10.1	3.1	0.0	chr1	42958185	42958216	(205998206)	+	(GCCGGG)n	Simple_repeat	1	33	(0)	83430
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
440	25.0	1.9	0.0	chr1	42959265	42959368	(205997054)	+	MIR	SINE/MIR	132	237	(25)	83431
3348	17.0	2.6	11.4	chr1	42989486	42989855	(205966567)	C	L1MCa	LINE/L1	(4865)	1643	1359	83507
30	3.4	0.0	0.0	chr1	42989856	42989885	(205966537)	+	(GA)n	Simple_repeat	1	30	(0)	83515
3348	17.0	2.6	11.4	chr1	42989886	42989941	(205966481)	C	L1MCa	LINE/L1	(5150)	1358	1313	83507
2182	8.0	0.0	2.0	chr1	42989942	42990242	(205966180)	+	AluSx1	SINE/Alu	2	296	(16)	83516
1806	18.8	3.0	2.2	chr1	43461286	43461478	(205494944)	+	MLT1A	LTR/ERVL-MaLR	1	196	(178)	84340
46	4.3	0.0	0.0	chr1	43461479	43461526	(205494896)	+	(CT)n	Simple_repeat	1	48	(0)	84341
1806	18.8	3.0	2.2	chr1	43461527	43461692	(205494730)	+	MLT1A	LTR/ERVL-MaLR	197	362	(12)	84340
48	8.0	0.0	0.0	chr1	43530912	43530977	(205425445)	+	(CGGCTC)n	Simple_repeat	1	66	(0)	84463
14	18.9	4.8	0.0	chr1	43531119	43531160	(205425262)	+	(CCCCT)n	Simple_repeat	1	44	(0)	84464
221	31.0	8.3	1.0	chr1	43666813	43666913	(205289509)	C	MIRb	SINE/MIR	(119)	149	41	84683
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
15	25.3	2.6	5.1	chr1	43707772	43707848	(205248574)	+	G-rich	Low_complexity	1	79	(0)	84748
51	0.0	0.0	0.0	chr1	44069470	44069513	(204886909)	+	(GA)n	Simple_repeat	1	44	(0)	85366
2079	13.7	11.0	1.0	chr1	44069514	44069715	(204886707)	C	MSTB	LTR/ERVL-MaLR	(197)	229	2	85365
2082	17.3	4.0	7.0	chr1	44091662	44091817	(204864605)	C	Charlie1b	DNA/hAT-Charlie	(382)	141	1	85417
696	13.8	0.0	4.9	chr1	44091823	44091945	(204864477)	+	AluJo	SINE/Alu	195	311	(1)	85419
35	0.0	0.0	0.0	chr1	44091962	44091991	(204864431)	+	(CT)n	Simple_repeat	1	30	(0)	85420
16	0.0	0.0	0.0	chr1	44092033	44092049	(204864373)	+	(A)n	Simple_repeat	1	17	(0)	85421
2222	9.2	0.3	1.4	chr1	44092061	44092354	(204864068)	+	AluSp	SINE/Alu	1	291	(22)	85422
291	33.6	10.3	5.0	chr1	44226222	44226679	(204729743)	C	L2b	LINE/L2	(455)	2964	2480	85702
443	27.8	9.8	1.4	chr1	44226713	44226778	(204729644)	C	L1M5	LINE/L1	(1005)	5141	5063	85703
43	0.0	0.0	0.0	chr1	44226779	44226815	(204729607)	+	(AC)n	Simple_repeat	1	37	(0)	85704
20	33.3	3.6	1.7	chr1	44261463	44261574	(204694848)	+	GA-rich	Low_complexity	1	116	(0)	85752
12	12.2	3.7	0.0	chr1	44267660	44267686	(204688736)	+	(CTGC)n	Simple_repeat	1	28	(0)	85757
2237	14.6	6.1	3.1	chr1	44275857	44276272	(204680150)	C	MSTB1	LTR/ERVL-MaLR	(3)	429	1	85771
25	22.9	0.0	0.0	chr1	44348214	44348274	(204608148)	+	GA-rich	Low_complexity	1	61	(0)	85857
350	29.3	17.0	3.1	chr1	44348289	44348545	(204607877)	+	MER129	LTR?	2	301	(168)	85858
15	21.2	0.0	2.5	chr1	44355120	44355159	(204601263)	+	(GGC)n	Simple_repeat	1	40	(0)	85869
837	16.1	0.0	0.8	chr1	44722273	44722402	(204234020)	+	FLAM_C	SINE/Alu	3	131	(12)	86567
13	15.5	0.0	3.2	chr1	44813962	44813992	(204142430)	+	G-rich	Low_complexity	1	31	(0)	86752
98	9.3	5.0	1.1	chr1	44814128	44814285	(204142137)	+	(TCTT)n	Simple_repeat	1	167	(0)	86753
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
1321	16.7	15.2	0.0	chr1	44869938	44870176	(204086246)	+	AluJr	SINE/Alu	6	287	(25)	86880
38	0.0	0.0	0.0	chr1	44870177	44870209	(204086213)	+	(AG)n	Simple_repeat	1	33	(0)	86881
282	29.4	11.4	2.4	chr1	44870247	44870413	(204086009)	+	L2	LINE/L2	2348	2531	(888)	86882
712	21.9	0.0	0.0	chr1	44938368	44938481	(204017941)	+	FLAM_A	SINE/Alu	3	116	(26)	87030
18	0.0	0.0	0.0	chr1	44938482	44938501	(204017921)	+	(CT)n	Simple_repeat	1	20	(0)	87031
1770	16.4	4.2	1.8	chr1	44938503	44938782	(204017640)	C	AluJb	SINE/Alu	(21)	291	5	87032
849	21.8	1.1	1.7	chr1	45139182	45139360	(203817062)	C	AluJb	SINE/Alu	(15)	297	120	87409
53	14.9	4.0	0.0	chr1	45139375	45139474	(203816948)	+	(TC)n	Simple_repeat	1	104	(0)	87410
597	19.3	4.8	8.2	chr1	45139475	45139645	(203816777)	C	AluJo	SINE/Alu	(11)	301	137	87411
17	20.6	4.0	0.0	chr1	45206721	45206770	(203749652)	+	(CGCC)n	Simple_repeat	1	52	(0)	87512
39	2.7	0.0	0.0	chr1	45816207	45816244	(203140178)	+	(GA)n	Simple_repeat	1	38	(0)	88849
7865	11.1	2.3	1.9	chr1	45816245	45816676	(203139746)	+	L1M1	LINE/L1	1960	2391	(5174)	88850
35	0.0	0.0	0.0	chr1	46071731	46071760	(202884662)	+	(AG)n	Simple_repeat	1	30	(0)	89263
1244	25.0	16.4	2.0	chr1	46148231	46148683	(202807739)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	64	89433
40	0.0	0.0	0.0	chr1	46148744	46148777	(202807645)	+	(GA)n	Simple_repeat	1	34	(0)	89434
3233	14.5	4.3	8.2	chr1	46148862	46149139	(202807283)	+	MER41B	LTR/ERV1	7	283	(351)	89435
228	26.7	3.2	0.0	chr1	46203085	46203144	(202753278)	C	L2c	LINE/L2	(5)	3370	3309	89544
294	31.4	12.4	5.5	chr1	46340413	46340614	(202615808)	+	L2b	LINE/L2	3009	3226	(149)	89844
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
16	24.5	0.0	0.0	chr1	46718973	46719016	(202237406)	+	(CTCCGG)n	Simple_repeat	1	44	(0)	90530
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
1013	16.2	2.6	2.6	chr1	46719615	46719804	(202236618)	+	MER53	DNA/hAT	1	190	(3)	90533
1085	24.2	16.1	6.3	chr1	46719805	46720209	(202236213)	C	L2a	LINE/L2	(111)	3315	2800	90532
672	22.6	0.8	0.8	chr1	47163699	47163846	(201792576)	+	FLAM_A	SINE/Alu	1	142	(0)	91023
34	3.0	0.0	0.0	chr1	47163847	47163880	(201792542)	+	(GA)n	Simple_repeat	1	34	(0)	91024
21	16.1	0.0	3.7	chr1	47163881	47163910	(201792512)	+	A-rich	Low_complexity	22	50	(0)	91025
1227	24.1	9.5	1.9	chr1	47163911	47164328	(201792094)	C	MLT1D	LTR/ERVL-MaLR	(52)	453	1	91021
39	0.0	2.7	0.0	chr1	47179099	47179135	(201777287)	+	(TC)n	Simple_repeat	1	38	(0)	91048
16	16.3	0.0	2.8	chr1	47438097	47438132	(201518290)	+	(GCG)n	Simple_repeat	1	36	(0)	91599
15	27.1	1.5	4.4	chr1	47996718	47996784	(200959638)	+	(CGG)n	Simple_repeat	1	68	(0)	92700
27	5.5	0.0	2.5	chr1	47997482	47997521	(200958901)	+	(GGGCC)n	Simple_repeat	1	40	(0)	92701
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
537	30.2	0.0	0.0	chr1	50019050	50019208	(198937214)	+	MER46C	DNA/TcMar-Tigger	180	338	(0)	95981
51	0.0	0.0	0.0	chr1	50019264	50019307	(198937115)	+	(TC)n	Simple_repeat	1	44	(0)	95982
35	6.8	0.0	0.0	chr1	50019308	50019353	(198937069)	+	(AC)n	Simple_repeat	1	46	(0)	95983
185	31.3	12.1	4.4	chr1	50019379	50019515	(198936907)	C	MIRb	SINE/MIR	(35)	233	85	95984
1696	27.0	7.9	3.9	chr1	50527487	50527811	(198428611)	C	Charlie25	DNA/hAT-Charlie	(1219)	1305	978	96965
72	5.3	0.0	0.0	chr1	50527812	50527890	(198428532)	+	(TC)n	Simple_repeat	1	79	(0)	96966
1890	13.4	3.5	1.8	chr1	50527891	50528167	(198428255)	C	AluJb	SINE/Alu	(30)	282	1	96967
14	13.1	0.0	0.0	chr1	50960185	50960210	(197996212)	+	(CGAG)n	Simple_repeat	1	26	(0)	97705
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
17	15.0	4.3	2.1	chr1	50978056	50978101	(197978321)	+	G-rich	Low_complexity	1	48	(0)	97722
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
1230	13.7	0.0	22.6	chr1	51247211	51247590	(197708832)	C	AluJo	SINE/Alu	(18)	294	1	98277
97	8.2	1.1	5.1	chr1	51508211	51508385	(197448037)	+	(AAGA)n	Simple_repeat	1	177	(0)	98809
259	26.7	9.4	5.6	chr1	51648707	51648849	(197307573)	+	MIR1_Amn	SINE/MIR	68	216	(14)	99177
11	22.2	0.0	4.9	chr1	51729791	51729831	(197226591)	+	G-rich	Low_complexity	1	41	(0)	99340
14	18.9	0.0	2.6	chr1	51990620	51990657	(196965765)	+	G-rich	Low_complexity	1	38	(0)	99906
31	0.0	0.0	0.0	chr1	52112350	52112376	(196844046)	+	(TC)n	Simple_repeat	1	27	(0)	100205
789	12.9	2.3	3.0	chr1	52112394	52112525	(196843897)	C	FLAM_A	SINE/Alu	(11)	131	1	100206
531	26.2	7.4	1.1	chr1	52233420	52233604	(196722818)	C	MIR	SINE/MIR	(22)	208	4	100439
1765	15.0	4.9	0.0	chr1	52233783	52234080	(196722342)	C	AluSx1	SINE/Alu	(0)	312	1	100440
18	19.4	9.5	2.5	chr1	52568190	52568263	(196388159)	+	(TC)n	Simple_repeat	1	81	(0)	101130
32	0.0	0.0	0.0	chr1	52726473	52726502	(196229920)	+	(GGCTGC)n	Simple_repeat	1	30	(0)	101582
366	30.9	6.1	0.8	chr1	52747445	52747568	(196208854)	+	MIRb	SINE/MIR	3	133	(135)	101639
929	25.4	0.8	2.1	chr1	52747772	52748008	(196208414)	+	MIR	SINE/MIR	2	235	(27)	101640
12	16.9	2.9	2.8	chr1	52843544	52843583	(196112839)	+	(GTCCC)n	Simple_repeat	1	40	(0)	101893
344	14.8	14.7	2.4	chr1	52937647	52937729	(196018693)	+	Charlie9	DNA/hAT-Charlie	8	102	(2655)	102130
2098	17.6	7.0	11.5	chr1	52937735	52938240	(196018182)	C	MER66D	LTR/ERV1	(0)	484	3	102131
375	34.1	10.0	3.5	chr1	52955573	52956036	(196000386)	+	L1MEd	LINE/L1	474	971	(6115)	102179
364	29.1	4.1	0.8	chr1	53350087	53350204	(195606218)	+	MIRc	SINE/MIR	45	166	(102)	102937
210	26.0	0.0	8.3	chr1	53350234	53350342	(195606080)	+	L2c	LINE/L2	2917	3016	(371)	102938
23	20.1	0.0	3.3	chr1	53458002	53458062	(195498360)	+	G-rich	Low_complexity	1	61	(0)	103122
51	2.1	0.0	0.0	chr1	53458063	53458110	(195498312)	+	(GA)n	Simple_repeat	1	48	(0)	103123
2531	7.7	0.0	0.3	chr1	53458154	53458466	(195497956)	+	AluSx1	SINE/Alu	1	312	(0)	103124
1313	20.1	4.1	1.3	chr1	54735764	54736071	(194220351)	C	L1MC4	LINE/L1	(964)	7078	6762	105780
81	3.6	6.0	0.0	chr1	54736151	54736266	(194220156)	+	(GA)n	Simple_repeat	1	123	(0)	105782
281	25.8	14.3	1.5	chr1	54736267	54736357	(194220065)	C	L1MC4	LINE/L1	(1430)	6612	6503	105780
1633	18.8	5.5	3.1	chr1	54926152	54926507	(194029915)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	106167
608	18.2	2.2	2.2	chr1	54926508	54926567	(194029855)	+	LTR50	LTR/ERVL	76	134	(661)	106166
107	7.8	3.6	0.6	chr1	54926582	54926746	(194029676)	+	(GA)n	Simple_repeat	1	171	(0)	106168
972	25.6	3.6	3.6	chr1	55199319	55199588	(193756834)	+	L1MC4	LINE/L1	7629	7898	(144)	106617
41	0.0	0.0	0.0	chr1	55199589	55199623	(193756799)	+	(GT)n	Simple_repeat	1	35	(0)	106618
972	25.6	3.6	3.6	chr1	55199624	55199766	(193756656)	+	L1MC4	LINE/L1	7899	8041	(1)	106617
2052	12.3	1.9	7.5	chr1	55199790	55200175	(193756247)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	106619
1530	20.6	8.9	0.3	chr1	55978231	55978389	(192978033)	+	MLT1B	LTR/ERVL-MaLR	7	186	(204)	107973
42	4.3	8.0	1.2	chr1	55978390	55978464	(192977958)	+	(TC)n	Simple_repeat	1	81	(0)	107974
1530	20.6	8.9	0.3	chr1	55978465	55978655	(192977767)	+	MLT1B	LTR/ERVL-MaLR	187	389	(1)	107973
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
27	0.0	0.0	0.0	chr1	57424334	57424359	(191532063)	+	(CGAG)n	Simple_repeat	1	26	(0)	110787
556	26.3	16.5	5.4	chr1	57517861	57518154	(191438268)	C	L3	LINE/CR1	(4)	4095	3763	110989
14	13.6	0.0	5.6	chr1	58783956	58783991	(190172431)	+	(CTGG)n	Simple_repeat	1	36	(0)	113506
291	20.0	3.1	0.3	chr1	58883997	58884065	(190072357)	+	MIRc	SINE/MIR	82	150	(58)	113732
353	19.9	33.4	5.5	chr1	58884137	58884280	(190072142)	+	MIR	SINE/MIR	61	244	(18)	113733
215	27.2	17.4	0.9	chr1	58903525	58903639	(190052783)	C	MIRb	SINE/MIR	(12)	256	119	113783
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
43	2.5	0.0	0.0	chr1	59016636	59016676	(189939746)	+	(CT)n	Simple_repeat	1	41	(0)	114009
1255	13.1	0.0	0.0	chr1	59016707	59016882	(189939540)	+	AluSx	SINE/Alu	137	312	(0)	114010
186	29.4	5.2	5.2	chr1	59078054	59078168	(189878254)	C	MIR	SINE/MIR	(29)	233	119	114145
33	3.1	0.0	0.0	chr1	59250252	59250284	(189706138)	+	(TC)n	Simple_repeat	1	33	(0)	114528
1327	18.7	0.0	15.9	chr1	59800269	59800507	(189155915)	C	AluJb	SINE/Alu	(10)	302	117	115470
84	7.2	1.7	0.0	chr1	59800508	59800624	(189155798)	+	(TCTC)n	Simple_repeat	1	119	(0)	115471
1327	18.7	0.0	15.9	chr1	59800625	59800742	(189155680)	C	AluJb	SINE/Alu	(196)	116	2	115470
13173	20.6	4.1	0.6	chr1	59800743	59801452	(189154970)	C	L1M4	LINE/L1	(3772)	2872	2068	115466
19	0.0	4.2	0.0	chr1	60572035	60572058	(188384364)	+	(GT)n	Simple_repeat	1	25	(0)	116759
52	8.9	0.0	0.0	chr1	60572058	60572129	(188384293)	+	(GA)n	Simple_repeat	1	72	(0)	116760
190	17.6	0.0	0.0	chr1	60866492	60866525	(188089897)	C	LFSINE_Vert	SINE/tRNA	(295)	164	131	117251
29	0.0	0.0	0.0	chr1	60866547	60866571	(188089851)	+	(AG)n	Simple_repeat	1	25	(0)	117252
42	7.9	0.0	0.0	chr1	60935512	60935565	(188020857)	+	(TC)n	Simple_repeat	1	54	(0)	117375
29	0.0	0.0	0.0	chr1	60935566	60935597	(188020825)	+	(AC)n	Simple_repeat	1	32	(0)	117376
24	21.9	1.9	0.0	chr1	60988040	60988093	(187968329)	+	(CT)n	Simple_repeat	1	55	(0)	117466
25	6.7	0.0	0.0	chr1	60988332	60988363	(187968059)	+	(T)n	Simple_repeat	1	32	(0)	117467
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
41	24.9	2.5	0.0	chr1	61082191	61082308	(187874114)	+	(GAGC)n	Simple_repeat	1	121	(0)	117647
16	18.9	0.0	0.0	chr1	61082351	61082380	(187874042)	+	(C)n	Simple_repeat	1	30	(0)	117648
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
18	20.1	2.5	0.0	chr1	61110035	61110074	(187846348)	+	GA-rich	Low_complexity	1	41	(0)	117674
2304	10.5	0.0	0.3	chr1	61303993	61304286	(187652136)	+	AluSz	SINE/Alu	1	293	(19)	117929
62	5.8	0.0	0.0	chr1	61393239	61393311	(187563111)	+	(CTCTCT)n	Simple_repeat	1	73	(0)	118077
78	6.6	3.6	0.0	chr1	61588982	61589093	(187367329)	+	(TC)n	Simple_repeat	1	116	(0)	118399
470	22.9	13.4	14.4	chr1	61812071	61812315	(187144107)	C	L1MEg	LINE/L1	(5328)	2005	1753	118906
60	12.9	2.0	0.0	chr1	61812334	61812434	(187143988)	+	(GA)n	Simple_repeat	1	103	(0)	118908
33	8.3	3.9	0.0	chr1	61812434	61812484	(187143938)	+	(GT)n	Simple_repeat	1	53	(0)	118909
2212	12.8	0.0	0.0	chr1	61812567	61812863	(187143559)	+	AluSx1	SINE/Alu	1	297	(15)	118910
30	0.0	0.0	0.0	chr1	61952254	61952279	(187004143)	+	(GA)n	Simple_repeat	1	26	(0)	119171
1945	9.4	6.6	1.4	chr1	62205070	62205356	(186751066)	+	AluSx3	SINE/Alu	1	303	(8)	119737
50	4.0	0.0	0.0	chr1	62205367	62205418	(186751004)	+	(CT)n	Simple_repeat	1	52	(0)	119738
322	23.3	0.0	0.0	chr1	62671406	62671465	(186284957)	+	L2c	LINE/L2	3290	3349	(38)	120605
18	26.8	3.5	0.0	chr1	62671471	62671528	(186284894)	+	GA-rich	Low_complexity	1	60	(0)	120606
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
1147	23.5	17.9	0.6	chr1	62735299	62735657	(186220765)	C	L1MEc	LINE/L1	(5932)	468	34	120736
42	7.0	1.6	1.6	chr1	62735819	62735880	(186220542)	+	(TC)n	Simple_repeat	1	63	(0)	120737
57	0.0	0.0	0.0	chr1	62751320	62751368	(186205054)	+	(TC)n	Simple_repeat	1	49	(0)	120764
47	28.1	4.2	3.6	chr1	63898490	63898728	(185057694)	+	GA-rich	Low_complexity	1	249	(0)	122910
218	26.0	2.0	0.0	chr1	63898778	63898827	(185057595)	C	L2c	LINE/L2	(188)	3187	3137	122905
698	30.7	3.6	0.9	chr1	63982053	63982269	(184974153)	C	MIRb	SINE/MIR	(39)	229	7	123068
553	25.4	0.0	2.3	chr1	63982269	63982397	(184974025)	+	MIRc	SINE/MIR	137	262	(6)	123069
100	15.7	3.1	0.0	chr1	64127402	64127592	(184828830)	+	(TC)n	Simple_repeat	1	197	(0)	123373
347	23.8	11.6	0.0	chr1	64506310	64506393	(184450029)	C	MIRb	SINE/MIR	(2)	266	172	124013
630	25.3	8.2	1.6	chr1	64506405	64506597	(184449825)	C	MIR	SINE/MIR	(16)	246	40	124014
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	18.9	2.8	0.0	chr1	64745015	64745050	(184211372)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	124431
2179	10.0	0.4	0.0	chr1	64867709	64867988	(184088434)	+	AluSp	SINE/Alu	1	281	(32)	124629
36	2.9	0.0	0.0	chr1	64868011	64868045	(184088377)	+	(AG)n	Simple_repeat	1	35	(0)	124630
219	39.4	1.0	0.0	chr1	64902448	64902546	(184053876)	C	L2b	LINE/L2	(10)	3365	3266	124685
38	0.0	0.0	0.0	chr1	64902552	64902584	(184053838)	+	(GA)n	Simple_repeat	1	33	(0)	124686
26	0.0	0.0	0.0	chr1	64902585	64902611	(184053811)	+	(TG)n	Simple_repeat	2	28	(0)	124687
53	0.0	0.0	0.0	chr1	65152317	65152361	(183804061)	+	(TC)n	Simple_repeat	1	45	(0)	125222
56	6.3	0.0	0.0	chr1	65306954	65307019	(183649403)	+	(CT)n	Simple_repeat	1	66	(0)	125548
555	29.5	0.0	8.4	chr1	65363259	65363405	(183593017)	C	MLT1I	LTR/ERVL-MaLR	(84)	327	195	125658
29	9.5	0.0	0.0	chr1	65363409	65363453	(183592969)	+	(AGAGAG)n	Simple_repeat	1	45	(0)	125660
17	0.0	0.0	0.0	chr1	65791915	65791933	(183164489)	+	(AC)n	Simple_repeat	1	19	(0)	126268
46	5.9	0.0	0.0	chr1	65791934	65791986	(183164436)	+	(CT)n	Simple_repeat	1	53	(0)	126269
16	21.9	1.9	3.8	chr1	66079127	66079166	(182877256)	+	(CT)n	Simple_repeat	1	40	(0)	126671
44	4.4	0.0	0.0	chr1	66079167	66079213	(182877209)	+	(TC)n	Simple_repeat	1	47	(0)	126672
16	21.9	1.9	3.8	chr1	66079214	66079224	(182877198)	+	(CT)n	Simple_repeat	1	10	(0)	126673
33	6.9	2.2	0.0	chr1	66283861	66283906	(182672516)	+	(AG)n	Simple_repeat	1	47	(0)	126990
431	33.6	5.8	6.9	chr1	66283933	66284163	(182672259)	C	L2c	LINE/L2	(0)	3375	3175	126991
482	26.4	14.2	0.0	chr1	66543679	66543860	(182412562)	+	MIRc	SINE/MIR	2	213	(55)	127377
79	2.6	1.2	0.0	chr1	66631653	66631732	(182324690)	+	(CT)n	Simple_repeat	1	81	(0)	127527
2117	11.0	1.1	1.4	chr1	67313543	67313823	(181642599)	+	AluSx	SINE/Alu	1	280	(32)	128611
293	33.3	12.3	0.7	chr1	67313824	67313959	(181642463)	+	MIR3	SINE/MIR	19	172	(36)	128612
187	38.6	8.0	3.0	chr1	67313970	67314100	(181642322)	C	MamSINE1	SINE/tRNA-RTE	(30)	260	123	128613
31	9.7	0.0	0.0	chr1	67538929	67538972	(181417450)	+	(AG)n	Simple_repeat	1	44	(0)	129096
266	23.1	1.5	1.5	chr1	67558890	67558955	(181397467)	+	CR1-3_Croc	LINE/CR1	2920	2985	(620)	129144
1399	21.0	4.9	10.6	chr1	67637155	67637317	(181319105)	+	MLT1B	LTR/ERVL-MaLR	1	170	(220)	129309
979	12.4	0.0	0.0	chr1	67637323	67637443	(181318979)	C	AluJo	SINE/Alu	(187)	125	5	129310
1399	21.0	4.9	10.6	chr1	67637444	67637481	(181318941)	+	MLT1B	LTR/ERVL-MaLR	171	188	(202)	129309
35	0.0	0.0	0.0	chr1	67637482	67637511	(181318911)	+	(TC)n	Simple_repeat	1	30	(0)	129311
1399	21.0	4.9	10.6	chr1	67637512	67637723	(181318699)	+	MLT1B	LTR/ERVL-MaLR	189	390	(0)	129309
717	31.9	10.1	2.5	chr1	67653203	67653516	(181302906)	+	L2	LINE/L2	1395	1739	(1680)	129351
50	5.6	0.0	0.0	chr1	67653517	67653572	(181302850)	+	(TC)n	Simple_repeat	1	56	(0)	129352
717	31.9	10.1	2.5	chr1	67653573	67653688	(181302734)	+	L2	LINE/L2	1740	1860	(1559)	129351
294	15.2	10.7	0.0	chr1	67762979	67763072	(181193350)	C	L1MC4	LINE/L1	(1)	8041	7933	129537
35	0.0	0.0	0.0	chr1	67763091	67763120	(181193302)	+	(GA)n	Simple_repeat	1	30	(0)	129538
1703	19.9	6.4	1.6	chr1	67763135	67763521	(181192901)	C	L1MC4	LINE/L1	(188)	7854	7448	129537
31	11.6	0.0	0.0	chr1	67770985	67771031	(181185391)	+	(GA)n	Simple_repeat	1	47	(0)	129551
677	28.1	1.5	1.0	chr1	67771038	67771231	(181185191)	+	LTR78	LTR/ERV1	1110	1304	(0)	129550
313	31.3	5.4	1.6	chr1	67812290	67812478	(181143944)	C	MIRc	SINE/MIR	(34)	234	30	129615
238	27.2	3.1	4.2	chr1	67812457	67812552	(181143870)	C	MIR3	SINE/MIR	(6)	202	108	129616
2597	8.3	0.0	0.0	chr1	67827425	67827724	(181128698)	C	AluY	SINE/Alu	(11)	300	1	129648
18	3.7	3.6	0.0	chr1	67925910	67925937	(181030485)	+	(TGTT)n	Simple_repeat	1	29	(0)	129821
31	0.0	0.0	0.0	chr1	67925939	67925965	(181030457)	+	(AG)n	Simple_repeat	1	27	(0)	129822
490	16.0	0.0	1.3	chr1	67925969	67926043	(181030379)	C	AluJr	SINE/Alu	(203)	109	36	129823
20	0.0	0.0	0.0	chr1	68173412	68173433	(180782989)	+	(CT)n	Simple_repeat	1	22	(0)	130181
430	32.9	9.0	2.6	chr1	68214687	68215029	(180741393)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	229	130245
317	29.3	5.1	6.2	chr1	68215041	68215200	(180741222)	C	MLT1K	LTR/ERVL-MaLR	(419)	176	19	130245
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
50	0.0	0.0	0.0	chr1	70610022	70610064	(178346358)	+	(TC)n	Simple_repeat	1	43	(0)	133710
6832	4.6	0.7	0.0	chr1	70610070	70610962	(178345460)	C	L1PA5	LINE/L1	(23)	6131	5233	133711
1352	27.7	10.4	2.2	chr1	71082754	71083482	(177872940)	C	L1MEf	LINE/L1	(5413)	1227	514	134386
38	0.0	0.0	0.0	chr1	71083510	71083542	(177872880)	+	(AG)n	Simple_repeat	1	33	(0)	134387
265	23.2	11.3	3.4	chr1	74653268	74653356	(174303066)	C	L2a	LINE/L2	(50)	3376	3280	138950
19	21.2	0.0	0.0	chr1	74653362	74653405	(174303017)	+	(TGTG)n	Simple_repeat	1	44	(0)	138951
51	5.9	2.8	0.0	chr1	74653405	74653475	(174302947)	+	(GA)n	Simple_repeat	1	73	(0)	138952
230	25.0	0.0	0.0	chr1	74653555	74653610	(174302812)	C	MIRc	SINE/MIR	(17)	251	196	138953
711	30.9	0.4	3.5	chr1	74943191	74943421	(174013001)	+	L2a	LINE/L2	2772	2995	(424)	139335
36	10.2	0.0	0.0	chr1	74943423	74943475	(174012947)	+	(TC)n	Simple_repeat	1	53	(0)	139336
1530	20.5	4.8	1.5	chr1	75321275	75321450	(173634972)	C	MLT1A	LTR/ERVL-MaLR	(11)	354	172	139784
36	0.0	0.0	0.0	chr1	75321451	75321481	(173634941)	+	(AG)n	Simple_repeat	1	31	(0)	139787
1530	20.5	4.8	1.5	chr1	75321482	75321646	(173634776)	C	MLT1A	LTR/ERVL-MaLR	(194)	171	2	139784
47	2.1	2.1	0.0	chr1	75348132	75348179	(173608243)	+	(TC)n	Simple_repeat	1	49	(0)	139836
10441	3.6	0.8	0.0	chr1	75375827	75377085	(173579337)	+	L1PA2	LINE/L1	127	1395	(4760)	139867
290	29.8	11.8	1.0	chr1	75588769	75588952	(173367470)	C	L2c	LINE/L2	(0)	3375	3192	140153
22	3.9	0.0	0.0	chr1	75589091	75589117	(173367305)	+	(CT)n	Simple_repeat	1	27	(0)	140154
493	31.6	4.8	3.3	chr1	75589212	75589394	(173367028)	+	MIR3	SINE/MIR	17	202	(6)	140155
46	0.0	0.0	0.0	chr1	76948588	76948626	(172007796)	+	(AG)n	Simple_repeat	1	39	(0)	142158
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
45	2.4	0.0	0.0	chr1	78032533	78032575	(170923847)	+	(AG)n	Simple_repeat	1	43	(0)	143973
800	14.2	0.0	0.9	chr1	78032576	78032688	(170923734)	C	AluJr	SINE/Alu	(200)	112	1	143974
35	6.9	0.0	0.0	chr1	78251014	78251059	(170705363)	+	(AG)n	Simple_repeat	1	46	(0)	144322
26	3.3	0.0	0.0	chr1	78251059	78251113	(170705309)	+	(GT)n	Simple_repeat	1	55	(0)	144323
1522	23.8	1.4	4.7	chr1	79319234	79319627	(169636795)	+	MLT2D	LTR/ERVL	1	377	(37)	145726
47	0.0	0.0	0.0	chr1	79319628	79319667	(169636755)	+	(CT)n	Simple_repeat	1	40	(0)	145727
1522	23.8	1.4	4.7	chr1	79319668	79319700	(169636722)	+	MLT2D	LTR/ERVL	378	414	(0)	145726
8120	14.6	4.2	5.4	chr1	80119270	80120696	(168835726)	C	MER51-int	LTR/ERV1	(6305)	1511	75	146750
48	0.0	0.0	0.0	chr1	80120697	80120737	(168835685)	+	(AG)n	Simple_repeat	1	41	(0)	146755
8120	14.6	4.2	5.4	chr1	80120738	80120836	(168835586)	C	MER51-int	LTR/ERV1	(7742)	74	5	146750
2253	11.4	6.6	0.0	chr1	80120841	80121192	(168835230)	C	MER51B	LTR/ERV1	(0)	377	1	146750
1529	16.6	17.1	1.9	chr1	80232068	80232257	(168724165)	C	MSTA	LTR/ERVL-MaLR	(0)	428	204	146895
42	0.0	0.0	0.0	chr1	80232258	80232293	(168724129)	+	(GA)n	Simple_repeat	1	36	(0)	146896
1529	16.6	17.1	1.9	chr1	80232294	80232464	(168723958)	C	MSTA	LTR/ERVL-MaLR	(225)	203	2	146895
54	16.6	2.5	1.6	chr1	80492671	80492783	(168463639)	+	(AT)n	Simple_repeat	1	114	(0)	147260
50	0.0	0.0	0.0	chr1	80492784	80492826	(168463596)	+	(AG)n	Simple_repeat	1	43	(0)	147261
1190	10.2	1.8	1.8	chr1	80492833	80492998	(168463424)	C	AluSc	SINE/Alu	(62)	247	82	147262
2419	16.1	0.0	0.0	chr1	80492999	80493395	(168463027)	+	Tigger4	DNA/TcMar-Tigger	2335	2731	(0)	147263
659	27.0	0.0	1.2	chr1	80825203	80825367	(168131055)	+	UCON62	DNA?	4	166	(11)	147640
1275	20.6	6.0	2.3	chr1	80938737	80938899	(168017523)	C	MSTD	LTR/ERVL-MaLR	(12)	384	212	147786
50	2.2	0.0	0.0	chr1	80938900	80938946	(168017476)	+	(GA)n	Simple_repeat	1	47	(0)	147787
1275	20.6	6.0	2.3	chr1	80938947	80939085	(168017337)	C	MSTD	LTR/ERVL-MaLR	(185)	211	70	147786
34	9.1	0.0	0.0	chr1	81049262	81049308	(167907114)	+	(TC)n	Simple_repeat	1	47	(0)	147929
27	20.1	0.0	0.0	chr1	81238293	81238344	(167718078)	+	(TC)n	Simple_repeat	1	52	(0)	148177
17	26.9	1.8	1.8	chr1	81306144	81306198	(167650224)	+	(CT)n	Simple_repeat	1	56	(0)	148266
710	25.3	2.2	14.8	chr1	81343503	81343726	(167612696)	C	MLT1A	LTR/ERVL-MaLR	(18)	378	173	148317
818	21.4	0.0	7.4	chr1	81343742	81343943	(167612479)	C	MLT1A	LTR/ERVL-MaLR	(187)	187	1	148317
2325	11.0	0.3	0.0	chr1	81602617	81602915	(167353507)	+	AluSz6	SINE/Alu	1	300	(12)	148681
21	20.9	1.9	1.9	chr1	81603061	81603112	(167353310)	+	(TC)n	Simple_repeat	1	53	(0)	148682
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
40	0.0	2.6	0.0	chr1	81824945	81824982	(167131440)	+	(TC)n	Simple_repeat	1	39	(0)	149046
1405	16.7	2.0	10.0	chr1	81825064	81825359	(167131063)	+	AluJr	SINE/Alu	1	274	(38)	149047
805	14.0	2.2	2.2	chr1	81847232	81847370	(167109052)	C	MER5A1	DNA/hAT-Charlie	(1)	165	27	149075
19	0.0	0.0	0.0	chr1	81945869	81945889	(167010533)	+	(TC)n	Simple_repeat	1	21	(0)	149177
2848	15.1	1.2	0.8	chr1	82368009	82368488	(166587934)	+	L1PA16	LINE/L1	5685	6166	(0)	149701
44	17.2	0.0	0.0	chr1	82368518	82368595	(166587827)	+	GA-rich	Low_complexity	1	78	(0)	149702
588	22.8	8.7	5.9	chr1	82368598	82368822	(166587600)	+	MLT1H1	LTR/ERVL-MaLR	299	657	(23)	149703
18	4.5	0.0	0.0	chr1	82422243	82422265	(166534157)	+	(TC)n	Simple_repeat	1	23	(0)	149779
13	26.1	2.2	0.0	chr1	82422266	82422290	(166534132)	+	(TCTGTC)n	Simple_repeat	1	49	(0)	149780
22	0.0	0.0	0.0	chr1	82422268	82422291	(166534131)	+	(TG)n	Simple_repeat	1	24	(0)	149781
1396	25.4	4.6	2.9	chr1	82430542	82430788	(166525634)	C	Charlie4a	DNA/hAT-Charlie	(2)	506	251	149789
1551	20.5	5.8	15.2	chr1	82430789	82430857	(166525565)	C	MLT2D	LTR/ERVL	(0)	414	366	149790
47	0.0	2.3	0.0	chr1	82430858	82430901	(166525521)	+	(GA)n	Simple_repeat	1	45	(0)	149791
1551	20.5	5.8	15.2	chr1	82430902	82431186	(166525236)	C	MLT2D	LTR/ERVL	(49)	365	98	149790
47	4.3	0.0	0.0	chr1	83154381	83154429	(165801993)	+	(TC)n	Simple_repeat	1	49	(0)	150810
817	11.6	11.5	0.0	chr1	83769206	83769343	(165187079)	C	UCON16	Unknown	(43)	246	91	151614
22	9.4	2.9	0.0	chr1	83884024	83884057	(165072365)	+	(TG)n	Simple_repeat	1	35	(0)	151768
37	2.9	0.0	0.0	chr1	83884138	83884173	(165072249)	+	(GA)n	Simple_repeat	1	36	(0)	151769
558	26.4	11.6	1.5	chr1	84103160	84103405	(164853017)	+	MLT1G	LTR/ERVL-MaLR	1	284	(307)	152069
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
3663	13.4	6.2	2.2	chr1	84583112	84583698	(164372724)	+	LTR9	LTR/ERV1	1	612	(0)	152759
56	7.6	0.0	0.0	chr1	84622584	84622653	(164333769)	+	(TC)n	Simple_repeat	1	70	(0)	152811
61	0.0	0.0	0.0	chr1	84699748	84699799	(164256623)	+	(CA)n	Simple_repeat	1	52	(0)	152934
23	0.0	0.0	0.0	chr1	84699800	84699824	(164256598)	+	(AG)n	Simple_repeat	1	25	(0)	152935
20	3.6	3.2	3.1	chr1	85049810	85049840	(163906582)	+	(GA)n	Simple_repeat	1	32	(0)	153509
2495	10.8	6.6	2.7	chr1	85049842	85050290	(163906132)	C	LTR21A	LTR/ERV1	(13)	468	1	153510
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
366	29.4	6.0	0.0	chr1	85275000	85275125	(163681297)	+	MIR	SINE/MIR	105	238	(24)	153914
309	24.2	13.9	5.8	chr1	85275153	85275323	(163681099)	+	L2a	LINE/L2	3234	3420	(6)	153915
18	4.8	0.0	0.0	chr1	85297911	85297932	(163658490)	+	(AC)n	Simple_repeat	1	22	(0)	153966
50	2.2	0.0	0.0	chr1	85302970	85303016	(163653406)	+	(GA)n	Simple_repeat	1	47	(0)	153973
23	11.1	0.0	0.0	chr1	85576952	85576990	(163379432)	+	(ACCGCC)n	Simple_repeat	1	39	(0)	154399
2180	13.1	0.0	2.5	chr1	86160712	86161031	(162795391)	C	AluSz	SINE/Alu	(0)	312	1	155224
265	29.9	12.4	3.6	chr1	86161032	86161088	(162795334)	C	MIR	SINE/MIR	(189)	73	19	155223
38	4.9	0.0	0.0	chr1	86161094	86161135	(162795287)	+	(TC)n	Simple_repeat	1	42	(0)	155225
209	33.3	0.0	0.0	chr1	86779408	86779473	(162176949)	C	L2b	LINE/L2	(214)	3161	3096	156085
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
2431	6.4	0.0	0.0	chr1	87057598	87057878	(161898544)	+	AluY	SINE/Alu	29	309	(2)	156537
536	33.4	14.2	3.4	chr1	87058117	87058615	(161897807)	C	L3	LINE/CR1	(14)	4085	3524	156538
15	7.8	7.4	0.0	chr1	87707045	87707071	(161249351)	+	GA-rich	Low_complexity	1	29	(0)	157445
35	6.7	2.1	0.0	chr1	87713646	87713692	(161242730)	+	(CT)n	Simple_repeat	1	48	(0)	157452
36	0.0	0.0	0.0	chr1	87713708	87713738	(161242684)	+	(TG)n	Simple_repeat	1	31	(0)	157453
479	28.4	8.3	3.4	chr1	87713751	87713990	(161242432)	C	MIRb	SINE/MIR	(6)	262	3	157454
2205	12.2	0.0	0.0	chr1	88985899	88986193	(159970229)	+	AluSq2	SINE/Alu	1	295	(18)	159322
21	9.3	0.0	2.7	chr1	88986194	88986218	(159970204)	+	(AG)n	Simple_repeat	1	25	(0)	159323
735	5.6	0.0	0.0	chr1	88986344	88986432	(159969990)	+	Alu	SINE/Alu	1	89	(222)	159324
15	30.7	0.0	1.8	chr1	89021718	89021772	(159934650)	+	GA-rich	Low_complexity	1	55	(0)	159391
51	0.0	0.0	0.0	chr1	89021789	89021832	(159934590)	+	(GA)n	Simple_repeat	1	44	(0)	159392
24	24.6	0.0	0.0	chr1	89358369	89358431	(159597991)	+	(TCTCTC)n	Simple_repeat	1	63	(0)	159766
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
185	25.3	8.1	5.2	chr1	89719698	89719793	(159236629)	+	AmnSINE1	SINE/5S-Deu-L2	337	435	(140)	160233
108	6.6	0.0	0.0	chr1	90392796	90392925	(158563497)	+	(TCTC)n	Simple_repeat	1	130	(0)	161251
909	29.2	9.0	7.2	chr1	90595504	90596004	(158360418)	+	L1MEc	LINE/L1	185	695	(5705)	161502
1047	19.2	0.6	0.6	chr1	90702828	90702988	(158253434)	+	AluJb	SINE/Alu	122	282	(30)	161662
36	0.0	0.0	0.0	chr1	90702989	90703028	(158253394)	+	(TC)n	Simple_repeat	1	40	(0)	161663
5121	19.9	8.0	3.8	chr1	91921962	91922439	(157033983)	C	MER21-int	LTR/ERVL	(2477)	1714	1219	163483
21	3.6	0.0	0.0	chr1	91922440	91922468	(157033954)	+	(CCTT)n	Simple_repeat	1	29	(0)	163499
30	3.5	0.0	0.0	chr1	91922469	91922498	(157033924)	+	(CT)n	Simple_repeat	1	30	(0)	163500
1331	17.0	0.5	0.9	chr1	91922499	91922710	(157033712)	C	AluJb	SINE/Alu	(15)	297	87	163501
29	12.4	0.0	0.0	chr1	92055988	92056031	(156900391)	+	(AG)n	Simple_repeat	1	44	(0)	163792
416	29.7	6.3	2.6	chr1	92087575	92087726	(156868696)	C	L2c	LINE/L2	(69)	3318	3161	163862
1606	14.8	0.0	2.7	chr1	92455223	92455478	(156500944)	+	AluJo	SINE/Alu	39	287	(25)	164512
68	3.0	0.0	0.0	chr1	92455481	92455547	(156500875)	+	(AG)n	Simple_repeat	1	67	(0)	164513
1159	23.5	3.7	5.0	chr1	92455548	92455694	(156500728)	C	L1M4	LINE/L1	(2445)	3701	3548	164504
43	0.0	0.0	0.0	chr1	92478758	92478794	(156477628)	+	(AG)n	Simple_repeat	1	37	(0)	164554
14	8.1	0.0	6.7	chr1	92784627	92784656	(156171766)	+	(GGC)n	Simple_repeat	1	30	(0)	165065
15	11.2	0.0	3.2	chr1	92784787	92784821	(156171601)	+	(CCGC)n	Simple_repeat	1	33	(0)	165066
939	21.4	10.2	10.4	chr1	92859453	92859713	(156096709)	+	LTR82A	LTR/ERVL	2	274	(598)	165248
486	28.4	5.1	4.5	chr1	92935057	92935211	(156021211)	C	MIR3	SINE/MIR	(49)	159	4	165376
61	0.0	0.0	0.0	chr1	93507057	93507108	(155449314)	+	(AC)n	Simple_repeat	1	52	(0)	166428
42	8.7	0.0	0.0	chr1	93507109	93507170	(155449252)	+	(TCTCTC)n	Simple_repeat	1	62	(0)	166429
14	18.6	2.7	0.0	chr1	93681782	93681818	(155274604)	+	(GCTCCG)n	Simple_repeat	1	38	(0)	166666
888	20.2	0.6	0.6	chr1	93960726	93960888	(154995534)	C	AluJr	SINE/Alu	(13)	299	137	167084
18	12.2	0.0	0.0	chr1	94026910	94026936	(154929486)	+	(GT)n	Simple_repeat	1	27	(0)	167176
84	19.2	0.0	0.0	chr1	94026936	94027100	(154929322)	+	GA-rich	Low_complexity	1	165	(0)	167177
226	22.0	0.0	5.7	chr1	94235393	94235445	(154720977)	+	MIRb	SINE/MIR	191	240	(28)	167491
16	8.5	0.0	0.0	chr1	94926230	94926254	(154030168)	+	(AGC)n	Simple_repeat	1	25	(0)	168515
31	22.1	2.0	4.8	chr1	95234014	95234115	(153722307)	+	(GCCCC)n	Simple_repeat	1	104	(0)	169060
1756	14.6	10.5	13.3	chr1	95264782	95265223	(153691199)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	169103
16583	16.5	1.8	2.7	chr1	95271255	95272865	(153683557)	+	L1MA5A	LINE/L1	3985	5675	(2463)	169115
56	3.6	0.0	0.0	chr1	95272866	95272922	(153683500)	+	(AG)n	Simple_repeat	1	57	(0)	169116
16583	14.3	2.2	1.8	chr1	95272923	95275510	(153680912)	+	L1MA5A	LINE/L1	5676	8286	(6)	169115
37	0.0	0.0	0.0	chr1	97525759	97525790	(151430632)	+	(AG)n	Simple_repeat	1	32	(0)	172152
2026	20.4	2.3	0.5	chr1	99372706	99372917	(149583505)	+	MSTD	LTR/ERVL-MaLR	1	217	(179)	174744
41	11.2	0.0	0.0	chr1	99372918	99372984	(149583438)	+	(CT)n	Simple_repeat	1	67	(0)	174745
2026	20.4	2.3	0.5	chr1	99372985	99373160	(149583262)	+	MSTD	LTR/ERVL-MaLR	218	395	(1)	174744
366	32.8	2.8	2.8	chr1	99558691	99558866	(149397556)	+	LTR78	LTR/ERV1	1116	1291	(13)	175003
35	8.8	0.0	0.0	chr1	99558889	99558936	(149397486)	+	(TC)n	Simple_repeat	1	48	(0)	175008
1495	17.1	0.7	7.2	chr1	99754184	99754487	(149201935)	+	AluJr	SINE/Alu	1	284	(28)	175300
40	2.6	0.0	0.0	chr1	99754488	99754526	(149201896)	+	(AG)n	Simple_repeat	1	39	(0)	175301
3397	12.4	7.3	0.3	chr1	99754527	99754727	(149201695)	+	L1MCa	LINE/L1	2819	3024	(3376)	175291
44	4.5	0.0	0.0	chr1	99899511	99899557	(149056865)	+	(TC)n	Simple_repeat	1	47	(0)	175578
23	11.8	0.0	0.0	chr1	99899559	99899596	(149056826)	+	(TCCC)n	Simple_repeat	1	38	(0)	175579
30	2.9	0.0	2.7	chr1	99899597	99899633	(149056789)	+	(CTTT)n	Simple_repeat	1	37	(0)	175580
2430	7.7	0.0	0.0	chr1	99899634	99899919	(149056503)	C	AluYm1	SINE/Alu	(25)	286	1	175581
1891	17.3	0.0	2.5	chr1	100130399	100130716	(148825706)	+	AluJo	SINE/Alu	1	310	(2)	176004
1148	17.0	4.9	0.0	chr1	100130749	100130960	(148825462)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	176005
310	27.6	17.4	4.5	chr1	100188560	100188847	(148767575)	C	L3b	LINE/CR1	(138)	5094	4762	176128
623	19.6	8.7	2.5	chr1	100360906	100361067	(148595355)	+	Tigger19b	DNA/TcMar-Tigger	306	478	(72)	176458
48	0.0	0.0	0.0	chr1	100538590	100538630	(148417792)	+	(TC)n	Simple_repeat	1	41	(0)	176727
14	18.3	5.7	3.6	chr1	100539548	100539600	(148416822)	+	(GCT)n	Simple_repeat	1	56	(0)	176730
954	14.3	0.0	0.0	chr1	100865004	100865136	(148091286)	C	FLAM_C	SINE/Alu	(10)	133	1	177145
74	2.8	0.0	0.0	chr1	100865157	100865228	(148091194)	+	(GA)n	Simple_repeat	1	72	(0)	177146
973	19.7	10.1	1.2	chr1	100865363	100865614	(148090808)	+	Charlie4a	DNA/hAT-Charlie	20	296	(212)	177147
28	14.8	0.0	0.0	chr1	101137025	101137070	(147819352)	+	(TC)n	Simple_repeat	1	46	(0)	177547
583	20.8	4.9	2.5	chr1	101223434	101223591	(147732831)	C	MLT1F1	LTR/ERVL-MaLR	(12)	557	396	177713
104	2.0	1.0	0.0	chr1	101223673	101223773	(147732649)	+	(TC)n	Simple_repeat	1	102	(0)	177714
19	0.0	0.0	0.0	chr1	101223774	101223797	(147732625)	+	(CTC)n	Simple_repeat	1	24	(0)	177715
1555	20.2	5.2	10.4	chr1	101223818	101224249	(147732173)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	177716
326	24.3	0.0	0.0	chr1	101254182	101254251	(147702171)	C	MIR3	SINE/MIR	(10)	198	129	177755
996	19.1	3.1	4.8	chr1	101282328	101282558	(147673864)	C	Charlie10a	DNA/hAT-Charlie	(29)	251	25	177807
476	31.7	3.9	1.0	chr1	101282650	101282850	(147673572)	+	L2	LINE/L2	2713	2919	(500)	177808
957	30.7	11.2	8.4	chr1	103411203	103411669	(145544753)	+	HAL1	LINE/L1	331	779	(1728)	180466
69	0.0	0.0	0.0	chr1	103411670	103411728	(145544694)	+	(CT)n	Simple_repeat	1	59	(0)	180467
957	30.7	11.2	8.4	chr1	103411729	103412468	(145543954)	+	HAL1	LINE/L1	780	1577	(930)	180466
738	28.1	17.5	1.7	chr1	103827104	103827287	(145129135)	+	MLT1F	LTR/ERVL-MaLR	1	193	(355)	180990
66	4.4	0.0	0.0	chr1	103827288	103827357	(145129065)	+	(TC)n	Simple_repeat	1	70	(0)	180991
738	28.1	17.5	1.7	chr1	103827358	103827632	(145128790)	+	MLT1F	LTR/ERVL-MaLR	194	548	(0)	180990
88	0.0	0.0	0.0	chr1	104507983	104508057	(144448365)	+	(AG)n	Simple_repeat	1	75	(0)	181768
2184	11.1	0.4	0.0	chr1	104508062	104508341	(144448081)	+	AluSx	SINE/Alu	3	283	(29)	181769
276	24.0	8.5	0.0	chr1	106950873	106950947	(142005475)	+	MIRb	SINE/MIR	175	256	(12)	184718
43	2.2	2.0	2.0	chr1	106951005	106951053	(142005369)	+	(TC)n	Simple_repeat	1	50	(0)	184719
1786	18.6	2.0	13.4	chr1	107907445	107907892	(141048530)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	186058
31	7.1	6.8	0.0	chr1	107998639	107998697	(140957725)	+	(TC)n	Simple_repeat	1	63	(0)	186201
562	17.4	0.0	0.0	chr1	107998727	107998812	(140957610)	+	L1PB4	LINE/L1	6058	6143	(13)	186202
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
37	0.0	0.0	0.0	chr1	108719746	108719777	(140236645)	+	(GA)n	Simple_repeat	1	32	(0)	187199
252	29.6	4.1	1.4	chr1	108719856	108719927	(140236495)	C	LTR79	LTR/ERVL	(385)	142	69	187200
2055	11.2	0.0	1.1	chr1	109113108	109113392	(139843030)	+	AluJb	SINE/Alu	1	282	(30)	188008
84	1.3	0.0	0.0	chr1	109113393	109113468	(139842954)	+	(AG)n	Simple_repeat	1	76	(0)	188009
35	8.8	0.0	0.0	chr1	109910719	109910766	(139045656)	+	(GT)n	Simple_repeat	1	48	(0)	189268
19	3.5	3.5	0.0	chr1	109910958	109910986	(139045436)	+	(AGCG)n	Simple_repeat	1	30	(0)	189269
16	27.0	0.0	5.8	chr1	110034688	110034756	(138921666)	+	(GCC)n	Simple_repeat	1	69	(0)	189456
387	29.1	5.3	4.3	chr1	110338041	110338320	(138618102)	+	Charlie16a	DNA/hAT-Charlie	44	326	(16)	189971
60	5.5	0.0	0.0	chr1	110620034	110620109	(138336313)	+	(GA)n	Simple_repeat	1	76	(0)	190477
13	25.9	0.0	8.6	chr1	110674722	110674802	(138281620)	+	G-rich	Low_complexity	1	81	(0)	190557
192	4.7	8.4	0.0	chr1	110773773	110774080	(138182342)	+	(AG)n	Simple_repeat	1	334	(0)	190716
47	2.1	2.1	0.0	chr1	111215998	111216045	(137740377)	+	(CT)n	Simple_repeat	1	49	(0)	191255
426	35.2	13.2	0.3	chr1	111541493	111541665	(137414757)	C	L2	LINE/L2	(953)	2466	2278	191673
43	4.5	0.0	0.0	chr1	111541666	111541711	(137414711)	+	(GA)n	Simple_repeat	1	46	(0)	191676
426	35.2	13.2	0.3	chr1	111541712	111541868	(137414554)	C	L2	LINE/L2	(1142)	2277	2087	191673
13	25.2	0.0	2.3	chr1	111738771	111738814	(137217608)	+	(CGCACCC)n	Simple_repeat	1	44	(0)	191992
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
20	15.9	0.0	0.0	chr1	112706396	112706430	(136249992)	+	(TC)n	Simple_repeat	1	35	(0)	193618
123	0.0	0.9	0.0	chr1	112706431	112706538	(136249884)	+	(AC)n	Simple_repeat	1	109	(0)	193619
570	21.3	6.6	8.7	chr1	112872568	112872752	(136083670)	+	MER21A	LTR/ERVL	130	310	(621)	193951
673	22.6	5.6	1.8	chr1	112872588	112872758	(136083664)	+	MER39	LTR/ERV1	268	445	(262)	193952
1210	20.3	5.3	5.6	chr1	112872728	112873259	(136083163)	+	LTR48	LTR/ERV1	53	775	(12)	193953
32	3.2	0.0	0.0	chr1	112875239	112875270	(136081152)	+	(GA)n	Simple_repeat	1	32	(0)	193960
1058	18.1	1.6	15.8	chr1	112875271	112875417	(136081005)	+	MLT1F1	LTR/ERVL-MaLR	157	304	(265)	193957
85	0.0	4.5	0.0	chr1	112881243	112881331	(136075091)	+	(TTTC)n	Simple_repeat	1	93	(0)	193973
69	1.9	9.5	0.0	chr1	112881332	112881436	(136074986)	+	(CT)n	Simple_repeat	1	115	(0)	193974
2270	9.5	0.3	0.0	chr1	112881437	112881721	(136074701)	C	AluSp	SINE/Alu	(23)	290	5	193975
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
369	28.0	10.7	1.1	chr1	112957084	112957260	(135999162)	C	MIRb	SINE/MIR	(41)	227	32	194128
250	29.1	2.5	7.1	chr1	112957314	112957439	(135998983)	C	L2c	LINE/L2	(14)	3373	3254	194129
187	21.4	0.0	2.3	chr1	112957430	112957472	(135998950)	C	L2b	LINE/L2	(10)	3365	3324	194130
328	31.4	0.0	0.0	chr1	112957540	112957625	(135998797)	C	MIRb	SINE/MIR	(71)	197	112	194131
2036	20.1	9.8	6.7	chr1	113217759	113218338	(135738084)	+	LTR36	LTR/ERV1	1	600	(11)	194686
184	13.8	0.0	0.0	chr1	113675870	113675898	(135280524)	+	MIRc	SINE/MIR	122	150	(118)	195341
41	2.2	2.1	2.0	chr1	113676032	113676079	(135280343)	+	(TC)n	Simple_repeat	1	49	(0)	195342
14	0.0	7.4	3.5	chr1	113758863	113758889	(135197533)	+	(AAAC)n	Simple_repeat	1	29	(0)	195472
384	25.3	18.8	5.2	chr1	113759675	113759907	(135196515)	+	L2b	LINE/L2	3104	3375	(0)	195473
19	0.0	0.0	0.0	chr1	113989900	113989920	(134966502)	+	(TG)n	Simple_repeat	1	21	(0)	195890
40	4.8	0.0	0.0	chr1	113989921	113989963	(134966459)	+	(AG)n	Simple_repeat	1	43	(0)	195891
3204	15.8	4.3	7.1	chr1	114367506	114369149	(134587273)	C	Harlequin-int	LTR/ERV1	(3752)	1350	1	196466
848	18.7	6.8	0.6	chr1	114710368	114710534	(134245888)	+	AluJb	SINE/Alu	135	312	(0)	197150
27	17.7	1.7	0.0	chr1	114710539	114710596	(134245826)	+	GA-rich	Low_complexity	1	59	(0)	197153
33	5.1	0.0	0.0	chr1	115176728	115176768	(133779654)	+	(AG)n	Simple_repeat	1	41	(0)	197798
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
185	37.9	4.4	1.1	chr1	116476506	116476593	(132479829)	+	L2c	LINE/L2	3273	3363	(24)	199760
77	3.7	0.0	1.2	chr1	116671161	116671246	(132285176)	+	(AAGG)n	Simple_repeat	1	86	(0)	200075
56	10.8	1.1	1.0	chr1	116671247	116671317	(132285105)	+	(AGAA)n	Simple_repeat	1	70	(0)	200076
21	0.0	0.0	0.0	chr1	116672626	116672648	(132283774)	+	(AG)n	Simple_repeat	1	23	(0)	200080
40	6.2	0.0	0.0	chr1	116830699	116830749	(132125673)	+	(TC)n	Simple_repeat	1	51	(0)	200340
47	0.0	0.0	0.0	chr1	116830750	116830789	(132125633)	+	(CA)n	Simple_repeat	1	40	(0)	200341
252	23.1	1.9	0.0	chr1	116830791	116830842	(132125580)	+	LTR33	LTR/ERVL	463	515	(0)	200342
38	2.8	0.0	0.0	chr1	116957105	116957141	(131999281)	+	(CT)n	Simple_repeat	1	37	(0)	200547
35	5.3	0.0	0.0	chr1	116957152	116957190	(131999232)	+	(TG)n	Simple_repeat	1	39	(0)	200548
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
47	0.0	0.0	0.0	chr1	117526842	117526881	(131429541)	+	(CT)n	Simple_repeat	1	40	(0)	201428
39	21.7	0.0	3.1	chr1	117526882	117526977	(131429445)	+	(AT)n	Simple_repeat	1	96	(0)	201429
365	34.1	0.0	0.0	chr1	117760097	117760222	(131196200)	C	MIRb	SINE/MIR	(100)	168	43	201769
439	31.1	0.7	2.9	chr1	118324269	118324407	(130632015)	C	LTR33A	LTR/ERVL	(342)	178	43	202619
49	2.2	0.0	0.0	chr1	118324443	118324488	(130631934)	+	(TC)n	Simple_repeat	1	46	(0)	202620
239	40.9	3.5	0.9	chr1	118324523	118324744	(130631678)	+	L2a	LINE/L2	2684	2911	(508)	202617
712	24.6	10.8	8.6	chr1	119291612	119291972	(129664450)	+	LTR16D	LTR/ERVL	1	370	(281)	203906
17	31.1	1.6	7.2	chr1	119291973	119292095	(129664327)	+	(TTCC)n	Simple_repeat	1	125	(0)	203907
319	25.0	1.1	3.3	chr1	119637756	119637846	(129318576)	+	UCON39	DNA/TcMar-Tigger	51	139	(46)	204322
42	6.9	3.3	0.0	chr1	119637943	119638003	(129318419)	+	(GA)n	Simple_repeat	1	63	(0)	204323
57	16.3	6.6	2.8	chr1	120041833	120042025	(128914397)	+	A-rich	Low_complexity	1	200	(0)	204899
1000	7.1	1.2	0.6	chr1	121418421	121418590	(127537832)	C	SVA_A	Retroposon/SVA	(1215)	172	2	207038
9333	8.0	1.4	2.0	chr1	121511971	121513640	(127442782)	+	HERV9N-int	LTR/ERV1	3984	5374	(0)	207152
32	3.2	0.0	0.0	chr1	143727467	143727498	(105228924)	+	(GA)n	Simple_repeat	1	32	(0)	208243
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
53	3.8	0.0	0.0	chr1	144558696	144558749	(104397673)	+	(GA)n	Simple_repeat	1	54	(0)	209622
210	29.2	17.2	0.0	chr1	144994471	144994542	(103961880)	+	MIR	SINE/MIR	1	87	(175)	210328
18	8.5	0.0	0.0	chr1	144994543	144994567	(103961855)	+	(TG)n	Simple_repeat	1	25	(0)	210329
53	2.0	0.0	0.0	chr1	144994568	144994617	(103961805)	+	(GA)n	Simple_repeat	1	50	(0)	210330
627	20.2	4.5	3.5	chr1	144994626	144994799	(103961623)	+	MIR	SINE/MIR	87	262	(0)	210328
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
78	0.0	0.0	0.0	chr1	145432404	145432469	(103523953)	+	(TC)n	Simple_repeat	1	66	(0)	210942
2330	5.4	0.0	0.4	chr1	145432470	145432747	(103523675)	C	AluSc5	SINE/Alu	(32)	277	1	210943
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
666	0.0	0.0	0.0	chr1	146037061	146037132	(102919290)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	211991
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
62	3.3	0.0	0.0	chr1	146378881	146378942	(102577480)	+	(TC)n	Simple_repeat	1	62	(0)	212538
26	10.3	0.0	2.2	chr1	146987674	146987704	(101968718)	+	(TC)n	Simple_repeat	1	30	(0)	213515
44	7.5	0.0	0.0	chr1	146987705	146987760	(101968662)	+	(GT)n	Simple_repeat	1	56	(0)	213516
26	10.3	0.0	2.2	chr1	146987761	146987775	(101968647)	+	(TC)n	Simple_repeat	1	15	(0)	213517
18	17.8	3.7	1.8	chr1	146987776	146987782	(101968640)	+	(TTTC)n	Simple_repeat	3	26	(0)	213518
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
42	4.6	0.0	0.0	chr1	147524309	147524353	(101432069)	+	(TC)n	Simple_repeat	1	45	(0)	214221
2115	10.7	0.0	2.1	chr1	147524354	147524643	(101431779)	C	AluSz	SINE/Alu	(28)	284	1	214222
65	0.0	0.0	0.0	chr1	147533195	147533249	(101423173)	+	(TC)n	Simple_repeat	1	55	(0)	214238
40	0.0	0.0	0.0	chr1	147540232	147540265	(101416157)	+	(TC)n	Simple_repeat	1	34	(0)	214255
17	17.4	0.0	2.9	chr1	147540964	147540998	(101415424)	+	(CT)n	Simple_repeat	1	35	(0)	214257
115	0.0	2.8	0.0	chr1	147541071	147541178	(101415244)	+	(GA)n	Simple_repeat	1	111	(0)	214258
41	6.0	0.0	0.0	chr1	147541179	147541230	(101415192)	+	(TG)n	Simple_repeat	1	52	(0)	214259
20	16.6	6.8	3.9	chr1	147541295	147541367	(101415055)	+	GA-rich	Low_complexity	1	78	(0)	214260
19	19.3	2.0	3.9	chr1	147587015	147587065	(101369357)	+	(TC)n	Simple_repeat	1	52	(0)	214347
2235	8.7	0.4	0.4	chr1	147970214	147970490	(100985932)	+	AluSx1	SINE/Alu	1	277	(35)	214923
77	3.9	0.0	0.0	chr1	147970492	147970570	(100985852)	+	(TC)n	Simple_repeat	1	79	(0)	214924
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
109	2.0	0.0	0.0	chr1	148280008	148280109	(100676313)	+	(AG)n	Simple_repeat	1	102	(0)	215420
2431	5.8	0.3	0.7	chr1	148280111	148280405	(100676017)	+	AluSc5	SINE/Alu	6	299	(10)	215421
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
41	20.7	1.5	6.0	chr1	149418908	149419046	(99537376)	+	(TCTT)n	Simple_repeat	1	132	(0)	217197
29	0.0	7.9	0.0	chr1	149419047	149419084	(99537338)	+	(TTTTC)n	Simple_repeat	1	41	(0)	217198
41	20.7	1.5	6.0	chr1	149419085	149419100	(99537322)	+	(TCTT)n	Simple_repeat	2	17	(0)	217199
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
312	22.4	1.6	11.2	chr1	149637049	149637182	(99319240)	+	AluSz	SINE/Alu	2	122	(190)	217502
1376	9.7	0.5	0.0	chr1	150236967	150237152	(98719270)	+	U2	snRNA	1	187	(1)	218583
14	24.4	0.0	0.0	chr1	150257968	150258006	(98698416)	+	(ACAGAG)n	Simple_repeat	1	39	(0)	218641
31	11.0	2.0	0.0	chr1	150258020	150258068	(98698354)	+	(CT)n	Simple_repeat	1	50	(0)	218642
225	25.8	2.1	4.1	chr1	150269399	150269495	(98686927)	+	L3b	LINE/CR1	4968	5062	(170)	218650
271	22.1	14.2	5.8	chr1	150368944	150369097	(98587325)	+	L2a	LINE/L2	3244	3412	(14)	218883
1514	14.8	5.4	6.7	chr1	150369302	150369441	(98586981)	C	AluJb	SINE/Alu	(30)	282	136	218888
2292	10.1	1.6	0.3	chr1	150539886	150540193	(98416229)	+	AluSx	SINE/Alu	1	312	(0)	219299
89	23.6	2.4	3.8	chr1	150540194	150540308	(98416114)	+	GA-rich	Low_complexity	123	235	(0)	219300
2286	11.5	0.0	0.7	chr1	150540309	150540613	(98415809)	+	AluSq2	SINE/Alu	1	303	(10)	219301
17	14.7	0.0	4.8	chr1	150548970	150549011	(98407411)	+	(GCCGC)n	Simple_repeat	1	42	(0)	219330
2513	12.8	6.1	0.2	chr1	150798593	150798992	(98157430)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	219855
1444	19.2	0.0	3.4	chr1	150984880	150985171	(97971251)	+	AluJb	SINE/Alu	1	282	(30)	220251
17	0.0	0.0	0.0	chr1	150985172	150985190	(97971232)	+	(TC)n	Simple_repeat	1	19	(0)	220252
35	0.0	0.0	0.0	chr1	150985191	150985220	(97971202)	+	(CA)n	Simple_repeat	1	30	(0)	220253
1581	17.0	5.0	0.7	chr1	150987086	150987355	(97969067)	+	AluJb	SINE/Alu	1	282	(30)	220256
20	4.1	0.0	0.0	chr1	150987356	150987380	(97969042)	+	(TC)n	Simple_repeat	1	25	(0)	220257
34	3.0	0.0	0.0	chr1	150987381	150987414	(97969008)	+	(CA)n	Simple_repeat	1	34	(0)	220258
2135	12.0	0.0	0.0	chr1	150987446	150987744	(97968678)	+	AluSz	SINE/Alu	1	299	(13)	220259
14	19.9	6.4	0.0	chr1	151005043	151005057	(97951365)	+	(CCTTCT)n	Simple_repeat	1	49	(0)	220293
17	14.9	3.2	0.0	chr1	151005058	151005088	(97951334)	+	(TC)n	Simple_repeat	1	32	(0)	220294
2386	9.9	0.3	0.6	chr1	151005171	151005483	(97950939)	+	AluSx1	SINE/Alu	1	312	(0)	220295
41	4.6	4.1	4.0	chr1	151979104	151979176	(96977246)	+	(TC)n	Simple_repeat	1	76	(0)	222221
12	27.2	2.3	0.0	chr1	151993623	151993666	(96962756)	+	(CCCGC)n	Simple_repeat	1	45	(0)	222236
2046	14.5	0.0	0.0	chr1	152405547	152405842	(96550580)	+	AluJb	SINE/Alu	1	296	(16)	222751
56	22.4	0.7	1.5	chr1	152405843	152405978	(96550444)	+	A-rich	Low_complexity	1	137	(0)	222752
16	0.0	0.0	0.0	chr1	152405978	152406001	(96550421)	+	(TAT)n	Simple_repeat	1	24	(0)	222753
1873	15.7	0.0	1.7	chr1	152406002	152406288	(96550134)	C	AluJo	SINE/Alu	(28)	284	3	222754
48	9.3	0.0	0.0	chr1	152748680	152748750	(96207672)	+	(TCTC)n	Simple_repeat	1	71	(0)	223165
82	16.8	1.4	0.0	chr1	153520162	153520308	(95436114)	+	GA-rich	Low_complexity	1	149	(0)	224223
2813	7.3	5.1	3.1	chr1	153520310	153520732	(95435690)	C	MER4A1	LTR/ERV1	(39)	433	2	224221
25	25.5	3.5	2.2	chr1	153678730	153678816	(95277606)	+	(CT)n	Simple_repeat	1	90	(0)	224529
82	1.4	0.0	0.0	chr1	153690069	153690142	(95266280)	+	(TC)n	Simple_repeat	1	74	(0)	224541
23	0.0	0.0	0.0	chr1	153690143	153690167	(95266255)	+	(CA)n	Simple_repeat	1	25	(0)	224542
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
12	16.5	0.0	0.0	chr1	154221333	154221378	(94735044)	+	(GAGC)n	Simple_repeat	1	46	(0)	225712
2837	15.0	4.1	5.6	chr1	154398489	154398906	(94557516)	C	MER6A	DNA/TcMar-Tigger	(0)	605	214	226094
30	8.2	0.0	0.0	chr1	154398907	154398945	(94557477)	+	(CT)n	Simple_repeat	1	39	(0)	226095
2837	15.0	4.1	5.6	chr1	154398946	154399098	(94557324)	C	MER6A	DNA/TcMar-Tigger	(392)	213	43	226094
48	4.1	0.0	0.0	chr1	154868901	154868950	(94087472)	+	(TC)n	Simple_repeat	1	50	(0)	226921
27	18.9	1.7	0.0	chr1	155078945	155079004	(93877418)	+	(GCT)n	Simple_repeat	1	61	(0)	227304
15	9.1	0.0	0.0	chr1	155081930	155081953	(93874469)	+	(CGC)n	Simple_repeat	1	24	(0)	227307
16	15.4	2.8	0.0	chr1	155127738	155127773	(93828649)	+	(CCTCC)n	Simple_repeat	1	37	(0)	227411
17	11.6	0.0	7.0	chr1	155127801	155127843	(93828579)	+	G-rich	Low_complexity	1	43	(0)	227412
12	21.8	2.7	0.0	chr1	155209171	155209207	(93747215)	+	G-rich	Low_complexity	1	38	(0)	227542
222	33.1	5.9	4.5	chr1	155226694	155226826	(93729596)	+	L2c	LINE/L2	3052	3186	(189)	227579
554	14.9	0.0	0.0	chr1	155226863	155226965	(93729457)	C	FLAM_C	SINE/Alu	(90)	212	38	227580
401	28.1	11.7	2.9	chr1	155941017	155941230	(93015192)	C	MIRc	SINE/MIR	(41)	227	3	229152
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
30	21.8	5.7	0.0	chr1	156082018	156082115	(92874307)	+	GA-rich	Low_complexity	1	103	(0)	229434
19	9.2	2.9	0.0	chr1	156082822	156082856	(92873566)	+	(GGGGGCC)n	Simple_repeat	1	36	(0)	229435
20	19.1	1.7	3.4	chr1	156082887	156082944	(92873478)	+	(CGCTCCC)n	Simple_repeat	1	59	(0)	229436
191	23.4	0.0	2.1	chr1	156086334	156086381	(92870041)	C	Tigger19a	DNA/TcMar-Tigger	(56)	267	221	229443
37	0.0	0.0	0.0	chr1	156086394	156086425	(92869997)	+	(CT)n	Simple_repeat	1	32	(0)	229444
2385	11.1	0.0	0.0	chr1	156124280	156124586	(92831836)	C	AluSg	SINE/Alu	(3)	307	1	229536
25	0.0	0.0	0.0	chr1	156296580	156296607	(92659815)	+	(AT)n	Simple_repeat	1	28	(0)	229871
41	0.0	0.0	0.0	chr1	156296608	156296642	(92659780)	+	(AG)n	Simple_repeat	1	35	(0)	229872
2292	12.2	0.0	0.3	chr1	156296655	156296958	(92659464)	+	AluSq2	SINE/Alu	1	303	(10)	229873
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
417	24.8	1.3	12.3	chr1	156571885	156572063	(92384359)	+	MER5A	DNA/hAT-Charlie	1	159	(30)	230360
33	0.0	0.0	0.0	chr1	156578231	156578258	(92378164)	+	(AG)n	Simple_repeat	1	28	(0)	230372
29	10.6	0.0	0.0	chr1	156578259	156578300	(92378122)	+	(TG)n	Simple_repeat	1	42	(0)	230373
22	3.9	0.0	0.0	chr1	156578300	156578326	(92378096)	+	(GA)n	Simple_repeat	1	27	(0)	230374
1594	18.6	3.5	0.7	chr1	156578380	156578486	(92377936)	+	AluJb	SINE/Alu	2	117	(195)	230375
38	0.0	0.0	0.0	chr1	156643636	156643668	(92312754)	+	(AG)n	Simple_repeat	1	33	(0)	230516
14	4.5	4.3	0.0	chr1	156693381	156693403	(92263019)	+	(TCC)n	Simple_repeat	1	24	(0)	230586
13	21.5	1.9	5.5	chr1	156693438	156693491	(92262931)	+	(TCCCC)n	Simple_repeat	1	55	(0)	230587
37	0.0	0.0	2.8	chr1	156817048	156817083	(92139339)	+	(TC)n	Simple_repeat	1	36	(0)	230815
29	0.0	0.0	0.0	chr1	156886588	156886612	(92069810)	+	(GT)n	Simple_repeat	1	25	(0)	230927
29	17.7	0.0	0.0	chr1	156886619	156886676	(92069746)	+	GA-rich	Low_complexity	1	58	(0)	230928
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
5001	22.1	7.0	7.9	chr1	157054277	157054901	(91901521)	C	L1ME1	LINE/L1	(3226)	3093	2506	231189
1559	18.9	0.0	3.1	chr1	157229799	157230084	(91726338)	+	AluJo	SINE/Alu	1	277	(35)	231460
53	5.8	1.4	1.3	chr1	157230091	157230164	(91726258)	+	(GA)n	Simple_repeat	1	75	(0)	231461
12	28.4	5.7	1.4	chr1	157230200	157230269	(91726153)	+	GA-rich	Low_complexity	1	74	(0)	231462
2644	11.0	3.8	6.5	chr1	157273298	157273792	(91682630)	C	LTR21A	LTR/ERV1	(0)	481	1	231519
19	23.3	4.6	0.0	chr1	157993504	157993577	(90962845)	+	(GCGCGG)n	Simple_repeat	1	77	(0)	232476
27	6.0	0.0	0.0	chr1	158114288	158114322	(90842100)	+	(AG)n	Simple_repeat	1	35	(0)	232696
215	35.1	8.1	2.0	chr1	158487715	158487865	(90468557)	C	L2c	LINE/L2	(48)	3339	3179	233125
43	4.5	0.0	0.0	chr1	158487977	158488022	(90468400)	+	(CT)n	Simple_repeat	1	46	(0)	233126
46	2.3	0.0	0.0	chr1	159756825	159756868	(89199554)	+	(TC)n	Simple_repeat	1	44	(0)	234708
330	30.8	4.6	2.8	chr1	159756919	159757025	(89199397)	+	MamTip2	DNA/hAT-Tip100	17	125	(180)	234709
654	30.2	2.8	0.0	chr1	159916219	159916430	(89039992)	+	Chap1_Mam	DNA/hAT-Charlie	1	218	(124)	234955
19	0.0	0.0	0.0	chr1	159927077	159927097	(89029325)	+	(CA)n	Simple_repeat	1	21	(0)	234965
40	0.0	0.0	0.0	chr1	159927098	159927131	(89029291)	+	(AG)n	Simple_repeat	1	34	(0)	234966
2023	14.9	1.7	0.0	chr1	160258066	160258354	(88698068)	+	AluJb	SINE/Alu	2	295	(17)	235485
978	15.8	20.1	8.5	chr1	160258507	160258766	(88697656)	+	AluJo	SINE/Alu	2	299	(13)	235486
37	0.0	0.0	0.0	chr1	160375463	160375494	(88580928)	+	(TC)n	Simple_repeat	1	32	(0)	235651
28	5.9	0.0	0.0	chr1	160375495	160375530	(88580892)	+	(AC)n	Simple_repeat	1	36	(0)	235652
1621	18.8	4.5	2.9	chr1	160433112	160433302	(88523120)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	182	235743
46	2.3	0.0	0.0	chr1	160433303	160433346	(88523076)	+	(AG)n	Simple_repeat	1	44	(0)	235744
1621	18.8	4.5	2.9	chr1	160433347	160433504	(88522918)	C	MLT1A	LTR/ERVL-MaLR	(193)	181	20	235743
4379	16.5	3.3	1.5	chr1	160530474	160531382	(88425040)	C	L1MB4	LINE/L1	(20)	6761	5835	235881
50	2.2	0.0	0.0	chr1	160531383	160531429	(88424993)	+	(TC)n	Simple_repeat	1	47	(0)	235882
6362	6.1	0.3	29.8	chr1	160531445	160533312	(88423110)	+	SVA_A	Retroposon/SVA	72	1387	(0)	235883
60	11.9	3.0	0.0	chr1	160767253	160767353	(88189069)	+	(GA)n	Simple_repeat	1	104	(0)	236231
502	26.5	1.9	4.4	chr1	160767385	160767542	(88188880)	+	MIRb	SINE/MIR	85	238	(30)	236232
16	14.2	8.7	5.3	chr1	160901928	160901996	(88054426)	+	(CAG)n	Simple_repeat	1	75	(0)	236447
19	0.0	0.0	0.0	chr1	160902169	160902189	(88054233)	+	(TG)n	Simple_repeat	1	21	(0)	236448
35	0.0	0.0	0.0	chr1	160902190	160902219	(88054203)	+	(GA)n	Simple_repeat	1	30	(0)	236449
17	17.3	9.6	3.3	chr1	161045483	161045565	(87910857)	+	(AGCCCCGC)n	Simple_repeat	1	91	(0)	236760
51	0.0	0.0	0.0	chr1	161053463	161053506	(87902916)	+	(TC)n	Simple_repeat	1	44	(0)	236770
104	14.7	2.0	1.0	chr1	161095318	161095513	(87860909)	+	(TCTT)n	Simple_repeat	1	200	(0)	236857
1923	13.3	2.9	1.9	chr1	161095514	161095821	(87860601)	C	AluSz	SINE/Alu	(1)	311	1	236858
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
37077	8.2	1.9	1.6	chr1	161252714	161256595	(87699827)	+	HERV9NC-int	LTR/ERV1	801	5224	(894)	237157
232	30.4	4.7	4.7	chr1	161389531	161389637	(87566785)	C	MER103C	DNA/hAT-Charlie	(123)	174	68	237440
13	17.2	4.9	2.3	chr1	161389847	161389887	(87566535)	+	(CTCCG)n	Simple_repeat	1	43	(0)	237441
1709	11.8	14.4	0.0	chr1	161396036	161396297	(87560125)	+	AluSx1	SINE/Alu	1	306	(6)	237458
18	0.0	0.0	0.0	chr1	161396299	161396318	(87560104)	+	(TA)n	Simple_repeat	1	20	(0)	237459
32	5.2	0.0	0.0	chr1	161396318	161396357	(87560065)	+	(AG)n	Simple_repeat	1	40	(0)	237460
390	11.3	0.0	0.0	chr1	161396418	161396470	(87559952)	+	AluJo	SINE/Alu	247	299	(13)	237461
2483	7.2	0.3	0.3	chr1	161396493	161396796	(87559626)	+	AluSq2	SINE/Alu	1	304	(9)	237462
19	12.4	0.0	0.0	chr1	161399246	161399280	(87557142)	+	(GCCGGA)n	Simple_repeat	1	35	(0)	237469
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
33	3.1	0.0	0.0	chr1	161458562	161458594	(87497828)	+	(CT)n	Simple_repeat	1	33	(0)	237575
660	0.0	0.0	0.0	chr1	161531113	161531184	(87425238)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	237673
921	32.7	13.1	7.0	chr1	161736122	161736419	(87220003)	+	LTR78	LTR/ERV1	529	826	(478)	238009
37	2.9	0.0	0.0	chr1	161736529	161736564	(87219858)	+	(GA)n	Simple_repeat	1	36	(0)	238011
369	28.2	3.7	0.8	chr1	161736625	161736756	(87219666)	+	LTR78	LTR/ERV1	1031	1166	(138)	238009
30	0.0	0.0	0.0	chr1	161974529	161974554	(86981868)	+	(TC)n	Simple_repeat	1	26	(0)	238395
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
721	17.3	0.8	3.1	chr1	162329227	162329353	(86627069)	+	AluSz6	SINE/Alu	120	243	(69)	238961
21	10.8	0.0	0.0	chr1	162329354	162329384	(86627038)	+	(AG)n	Simple_repeat	1	31	(0)	238962
2030	12.2	1.4	0.7	chr1	162532572	162532849	(86423573)	+	AluSz	SINE/Alu	3	282	(30)	239300
15	5.6	0.0	0.0	chr1	162532850	162532868	(86423554)	+	(TC)n	Simple_repeat	1	19	(0)	239301
19	8.3	0.0	0.0	chr1	162532868	162532893	(86423529)	+	(TA)n	Simple_repeat	1	26	(0)	239302
1109	31.3	7.9	1.0	chr1	162537279	162537362	(86419060)	C	MamRep1527	LTR	(779)	190	106	239313
53	3.9	0.0	0.0	chr1	162537389	162537442	(86418980)	+	(GA)n	Simple_repeat	1	54	(0)	239315
26	6.3	0.0	0.0	chr1	162673576	162673609	(86282813)	+	(TG)n	Simple_repeat	1	34	(0)	239593
40	6.1	0.0	0.0	chr1	162673609	162673659	(86282763)	+	(GA)n	Simple_repeat	1	51	(0)	239594
30	0.0	0.0	0.0	chr1	162673733	162673761	(86282661)	+	(AAAAC)n	Simple_repeat	1	29	(0)	239595
2001	19.3	4.0	6.7	chr1	163363038	163363405	(85593017)	C	MLT1F1	LTR/ERVL-MaLR	(9)	560	195	240648
35	0.0	0.0	0.0	chr1	163363406	163363435	(85592987)	+	(GA)n	Simple_repeat	1	30	(0)	240649
2001	21.6	3.7	8.0	chr1	163363436	163363638	(85592784)	C	MLT1F1	LTR/ERVL-MaLR	(375)	194	1	240648
20	13.9	7.0	1.6	chr1	164559013	164559069	(84397353)	+	(CCCTCCT)n	Simple_repeat	1	61	(0)	242315
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
17	18.2	0.0	0.0	chr1	164559329	164559359	(84397063)	+	G-rich	Low_complexity	1	31	(0)	242317
14	0.0	4.8	0.0	chr1	164564258	164564278	(84392144)	+	(TATT)n	Simple_repeat	1	22	(0)	242321
638	21.0	0.0	2.4	chr1	164584218	164584341	(84372081)	+	FLAM_A	SINE/Alu	1	121	(21)	242352
34	3.0	0.0	0.0	chr1	164584351	164584384	(84372038)	+	(GA)n	Simple_repeat	1	34	(0)	242353
22	0.0	0.0	0.0	chr1	164707395	164707418	(84249004)	+	(GT)n	Simple_repeat	1	24	(0)	242522
44	0.0	0.0	0.0	chr1	164707419	164707456	(84248966)	+	(GA)n	Simple_repeat	1	38	(0)	242523
2026	15.7	0.0	0.0	chr1	164901735	164902008	(84054414)	C	AluJb	SINE/Alu	(38)	274	1	242790
24	0.0	0.0	0.0	chr1	164902101	164902127	(84054295)	+	(CT)n	Simple_repeat	1	27	(0)	242791
35	0.0	0.0	0.0	chr1	164902128	164902157	(84054265)	+	(TA)n	Simple_repeat	1	30	(0)	242792
26	20.7	3.3	0.0	chr1	164902186	164902246	(84054176)	+	(TA)n	Simple_repeat	1	63	(0)	242792
34	3.0	0.0	0.0	chr1	165622717	165622750	(83333672)	+	(GA)n	Simple_repeat	1	34	(0)	243975
12	12.0	0.0	6.5	chr1	165622754	165622784	(83333638)	+	G-rich	Low_complexity	1	31	(0)	243976
15	18.3	2.4	2.4	chr1	165622795	165622835	(83333587)	+	(TCTC)n	Simple_repeat	1	42	(0)	243977
281	32.2	8.8	3.3	chr1	165634480	165634662	(83321760)	+	L2a	LINE/L2	2947	3140	(286)	243997
15	18.5	0.0	7.8	chr1	165634713	165634752	(83321670)	+	(CT)n	Simple_repeat	1	36	(0)	243998
31	0.0	4.4	4.3	chr1	165634753	165634797	(83321625)	+	(CTCC)n	Simple_repeat	1	47	(0)	243999
15	18.5	0.0	7.8	chr1	165634798	165634807	(83321615)	+	(CT)n	Simple_repeat	1	10	(0)	244000
44	20.1	0.0	0.0	chr1	165708138	165708223	(83248199)	+	(CT)n	Simple_repeat	1	86	(0)	244136
23	27.8	0.0	6.0	chr1	165708224	165708232	(83248190)	+	(CTCC)n	Simple_repeat	6	100	(0)	244137
24	0.0	0.0	0.0	chr1	166046695	166046720	(82909702)	+	(GT)n	Simple_repeat	1	26	(0)	244731
62	0.0	0.0	0.0	chr1	166046721	166046773	(82909649)	+	(GA)n	Simple_repeat	1	53	(0)	244732
529	31.2	7.3	11.9	chr1	166287339	166288030	(82668392)	C	L1MEi	LINE/L1	(1482)	730	76	245054
51	2.1	0.0	0.0	chr1	166288031	166288078	(82668344)	+	(TC)n	Simple_repeat	1	48	(0)	245055
529	31.2	7.3	11.9	chr1	166288079	166288152	(82668270)	C	L1MEi	LINE/L1	(2137)	75	2	245054
1992	13.1	0.8	17.3	chr1	166552882	166553332	(82403090)	+	MER51B	LTR/ERV1	2	377	(0)	245434
917	14.5	1.2	7.6	chr1	166553333	166553418	(82403004)	+	MER51-int	LTR/ERV1	1	76	(6463)	245434
46	0.0	0.0	0.0	chr1	166553419	166553457	(82402965)	+	(TC)n	Simple_repeat	1	39	(0)	245435
16149	13.7	4.3	2.1	chr1	166553458	166554888	(82401534)	+	MER51-int	LTR/ERV1	77	1713	(6103)	245434
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
282	36.4	9.0	2.2	chr1	167526915	167527234	(81429188)	+	L2c	LINE/L2	3021	3364	(23)	246833
32	5.3	0.0	0.0	chr1	167527237	167527276	(81429146)	+	(GA)n	Simple_repeat	1	40	(0)	246834
218	24.8	0.6	6.0	chr1	167527357	167527459	(81428963)	+	L2a	LINE/L2	3294	3424	(2)	246835
943	29.2	9.0	6.6	chr1	167658731	167659280	(81297142)	C	L1ME3G	LINE/L1	(345)	579	15	247083
1740	16.5	11.0	1.6	chr1	168524329	168524512	(80431910)	C	MSTA	LTR/ERVL-MaLR	(0)	428	223	248533
34	0.0	0.0	0.0	chr1	168524513	168524541	(80431881)	+	(GA)n	Simple_repeat	1	29	(0)	248534
1740	16.5	11.0	1.6	chr1	168524542	168524743	(80431679)	C	MSTA	LTR/ERVL-MaLR	(206)	222	1	248533
109	8.8	0.0	0.0	chr1	169055480	169055628	(79900794)	+	(TTTC)n	Simple_repeat	1	149	(0)	249358
34	7.5	0.0	0.0	chr1	169055658	169055700	(79900722)	+	(TC)n	Simple_repeat	1	43	(0)	249359
1204	18.0	2.8	0.5	chr1	169055716	169055921	(79900501)	C	AluJr	SINE/Alu	(27)	285	75	249360
223	22.0	12.5	4.2	chr1	169086939	169087033	(79869389)	+	MIR1_Amn	SINE/MIR	72	175	(55)	249416
42	22.7	4.8	0.8	chr1	169087035	169087159	(79869263)	+	(CTCT)n	Simple_repeat	1	131	(0)	249417
253	23.2	5.5	0.0	chr1	169087181	169087249	(79869173)	+	AmnSINE1	SINE/5S-Deu-L2	503	575	(0)	249418
13	17.7	5.3	0.0	chr1	169105812	169105849	(79850573)	+	(GCAGGA)n	Simple_repeat	1	40	(0)	249447
14	19.3	1.6	7.9	chr1	169106093	169106154	(79850268)	+	(CGCGCC)n	Simple_repeat	1	63	(0)	249448
252	20.0	3.6	7.0	chr1	169509378	169509463	(79446959)	+	Tigger19a	DNA/TcMar-Tigger	132	214	(109)	250040
585	8.3	14.3	0.0	chr1	169509630	169509725	(79446697)	+	L1MB3	LINE/L1	6065	6176	(7)	250041
43	17.8	2.1	1.1	chr1	170663003	170663057	(78293365)	+	(CT)n	Simple_repeat	1	56	(0)	251604
32	5.4	0.0	0.0	chr1	170663058	170663096	(78293326)	+	(CTCC)n	Simple_repeat	1	39	(0)	251605
43	17.8	2.1	1.1	chr1	170663097	170663133	(78293289)	+	(CT)n	Simple_repeat	1	37	(0)	251606
24	29.0	2.5	1.2	chr1	170664065	170664144	(78292278)	+	(CT)n	Simple_repeat	1	82	(0)	251608
26	19.9	3.1	5.9	chr1	170664145	170664157	(78292265)	+	(CCCT)n	Simple_repeat	6	101	(0)	251609
66	1.7	0.0	0.0	chr1	170689815	170689875	(78266547)	+	(TC)n	Simple_repeat	1	61	(0)	251640
27	6.0	0.0	0.0	chr1	170689876	170689910	(78266512)	+	(GT)n	Simple_repeat	1	35	(0)	251641
6003	13.2	2.6	1.8	chr1	171722930	171723980	(77232442)	C	MER11C	LTR/ERVK	(5)	1066	7	253222
65	22.8	0.7	0.0	chr1	172145301	172145446	(76810976)	+	(TCTC)n	Simple_repeat	1	147	(0)	253851
2223	16.2	3.4	1.7	chr1	172978396	172978739	(75977683)	+	MLT2D	LTR/ERVL	1	355	(59)	254963
38	8.2	3.0	1.4	chr1	172978740	172978806	(75977616)	+	(TC)n	Simple_repeat	1	69	(0)	254964
2223	16.2	3.4	1.7	chr1	172978807	172978868	(75977554)	+	MLT2D	LTR/ERVL	356	413	(1)	254963
27768	6.8	1.9	1.4	chr1	173684303	173688508	(75267914)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	864	255944
52	22.3	0.0	0.0	chr1	173688514	173688620	(75267802)	+	(CT)n	Simple_repeat	1	107	(0)	255945
411	13.6	4.0	2.8	chr1	173688627	173688905	(75267517)	C	HERVIP10F-int	LTR/ERV1	(1237)	4137	3988	255946
51	0.0	0.0	0.0	chr1	174280049	174280092	(74676330)	+	(GA)n	Simple_repeat	1	44	(0)	257009
16	12.6	2.7	2.6	chr1	174866073	174866110	(74090312)	+	GA-rich	Low_complexity	1	38	(0)	257806
63	0.0	0.0	0.0	chr1	174866111	174866164	(74090258)	+	(GA)n	Simple_repeat	1	54	(0)	257807
53	0.0	0.0	0.0	chr1	175312622	175312666	(73643756)	+	(CA)n	Simple_repeat	1	45	(0)	258512
2162	19.7	9.2	7.5	chr1	175312667	175312725	(73643697)	+	MLT2B1	LTR/ERVL	473	520	(0)	258511
15	5.5	0.0	0.0	chr1	175312773	175312791	(73643631)	+	(AG)n	Simple_repeat	1	19	(0)	258513
63	1.8	0.0	0.0	chr1	175517013	175517070	(73439352)	+	(GA)n	Simple_repeat	1	58	(0)	258806
54	0.0	0.0	0.0	chr1	175743630	175743675	(73212747)	+	(TC)n	Simple_repeat	1	46	(0)	259141
27184	10.2	3.2	3.4	chr1	176097888	176099505	(72856917)	+	MER61-int	LTR/ERV1	1480	3044	(2173)	259701
42	0.0	0.0	0.0	chr1	176099506	176099541	(72856881)	+	(TC)n	Simple_repeat	1	36	(0)	259703
27184	10.2	3.2	3.4	chr1	176099542	176100107	(72856315)	+	MER61-int	LTR/ERV1	3045	3626	(1591)	259701
5753	24.5	9.1	5.9	chr1	176142492	176143673	(72812749)	+	L1ME3B	LINE/L1	2952	4212	(2421)	259768
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
38	5.0	0.0	0.0	chr1	176935748	176935789	(72020633)	+	(TC)n	Simple_repeat	1	42	(0)	260915
115	20.3	2.6	3.1	chr1	177008353	177008661	(71947761)	+	GA-rich	Low_complexity	1	317	(0)	261055
26603	13.5	5.2	4.9	chr1	177320093	177324741	(71631681)	+	HERV9N-int	LTR/ERV1	1	4800	(574)	261506
23	13.0	0.0	0.0	chr1	178058669	178058703	(70897719)	+	(TC)n	Simple_repeat	1	35	(0)	262505
1043	21.2	13.7	3.3	chr1	178242024	178242414	(70714008)	C	L1MDb	LINE/L1	(4229)	2404	1967	262797
83	2.4	1.1	1.1	chr1	178242424	178242511	(70713911)	+	(TC)n	Simple_repeat	1	89	(0)	262798
475	15.5	0.0	7.1	chr1	178242515	178242598	(70713824)	C	AluJo	SINE/Alu	(234)	78	1	262799
658	18.8	5.7	0.0	chr1	178242599	178242731	(70713691)	C	L1MDb	LINE/L1	(4975)	1658	1518	262797
784	20.4	5.3	0.0	chr1	178379235	178379376	(70577046)	+	FRAM	SINE/Alu	1	150	(26)	263003
30	21.4	6.6	0.0	chr1	178379377	178379390	(70577032)	+	GA-rich	Low_complexity	1	27	(65)	263004
17	20.3	2.4	0.0	chr1	178379391	178379432	(70576990)	+	G-rich	Low_complexity	1	43	(0)	263005
30	21.4	6.6	0.0	chr1	178379433	178379463	(70576959)	+	GA-rich	Low_complexity	28	92	(0)	263004
17	27.9	0.0	6.1	chr1	178725474	178725518	(70230904)	+	G-rich	Low_complexity	19	82	(0)	263567
915	25.4	8.6	3.1	chr1	179033992	179034384	(69922038)	C	MLT1H	LTR/ERVL-MaLR	(68)	487	49	264033
808	18.1	0.0	4.3	chr1	179034397	179034534	(69921888)	C	FLAM_C	SINE/Alu	(11)	132	1	264035
17	14.8	3.8	1.2	chr1	180230210	180230254	(68726168)	+	G-rich	Low_complexity	1	46	(0)	266085
21	10.4	0.0	0.0	chr1	180595329	180595359	(68361063)	+	(CT)n	Simple_repeat	1	31	(0)	266639
257	27.2	4.9	10.2	chr1	180595365	180595556	(68360866)	C	L2b	LINE/L2	(7)	3419	3210	266640
4040	21.8	12.1	6.7	chr1	180712874	180714349	(68242073)	C	L1ME1	LINE/L1	(1381)	4765	3188	266819
62	0.0	0.0	0.0	chr1	180714350	180714402	(68242020)	+	(TC)n	Simple_repeat	1	53	(0)	266832
4040	21.8	12.1	6.7	chr1	180714403	180714430	(68241992)	C	L1ME1	LINE/L1	(2959)	3187	3169	266819
1799	19.0	0.0	0.0	chr1	180714431	180714704	(68241718)	C	AluJo	SINE/Alu	(38)	274	1	266833
4999	25.9	10.3	10.0	chr1	180744950	180745916	(68210506)	C	L1MEf	LINE/L1	(5555)	992	25	266884
18	19.2	2.7	6.6	chr1	181105313	181105386	(67851036)	+	(GCGCGG)n	Simple_repeat	1	76	(0)	267473
399	31.0	15.4	5.1	chr1	181127263	181127459	(67828963)	C	MIRb	SINE/MIR	(22)	246	26	267516
983	32.9	6.9	9.5	chr1	182073023	182073997	(66882425)	+	L2c	LINE/L2	1860	2806	(613)	268801
318	23.1	3.7	0.0	chr1	182074009	182074086	(66882336)	C	L2a	LINE/L2	(8)	3418	3338	268802
36	15.9	8.3	1.0	chr1	182074090	182074185	(66882237)	+	GA-rich	Low_complexity	1	104	(0)	268803
574	27.3	14.2	6.0	chr1	182074187	182074676	(66881746)	C	L2a	LINE/L2	(83)	3343	2832	268802
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
313	25.3	4.0	3.0	chr1	182604884	182604993	(66351429)	C	MIR	SINE/MIR	(98)	164	61	269730
407	27.7	4.7	4.2	chr1	182614697	182614772	(66341650)	+	MIRc	SINE/MIR	191	268	(0)	269750
16	23.0	0.0	0.0	chr1	182614833	182614873	(66341549)	+	G-rich	Low_complexity	1	41	(0)	269752
193	37.3	7.3	2.2	chr1	182617590	182617811	(66338611)	+	MIRc	SINE/MIR	20	253	(15)	269758
230	32.7	11.0	5.8	chr1	182617930	182618101	(66338321)	C	MamRTE1	LINE/RTE-BovB	(3551)	261	80	269759
246	30.7	2.5	8.3	chr1	182688196	182688327	(66268095)	+	L2c	LINE/L2	3202	3355	(32)	269873
29	6.2	0.0	0.0	chr1	182688345	182688378	(66268044)	+	(TC)n	Simple_repeat	1	34	(0)	269874
1978	23.9	8.2	2.2	chr1	182688480	182689056	(66267366)	+	MLT1E2	LTR/ERVL-MaLR	14	627	(0)	269875
3561	8.9	8.7	0.2	chr1	183072606	183073089	(65883333)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	270535
2241	10.5	2.0	0.0	chr1	183176751	183177045	(65779377)	+	AluSc8	SINE/Alu	1	301	(10)	270673
20	0.0	3.6	3.5	chr1	183177046	183177066	(65779356)	+	(AT)n	Simple_repeat	2	22	(0)	270674
33	0.0	0.0	0.0	chr1	183177067	183177094	(65779328)	+	(AG)n	Simple_repeat	1	28	(0)	270675
1616	7.2	19.1	0.8	chr1	183177127	183177361	(65779061)	+	AluY	SINE/Alu	1	288	(23)	270676
29	11.7	2.1	0.0	chr1	183742724	183742770	(65213652)	+	(GA)n	Simple_repeat	1	48	(0)	271585
698	25.4	2.9	5.7	chr1	183752525	183752573	(65203849)	C	L1M5	LINE/L1	(765)	5477	5436	271595
1159	26.8	10.3	1.6	chr1	183752572	183752660	(65203762)	C	L1ME3C	LINE/L1	(5399)	1704	1592	271591
42	4.7	0.0	0.0	chr1	183752661	183752705	(65203717)	+	(TC)n	Simple_repeat	1	45	(0)	271597
1159	26.8	10.3	1.6	chr1	183752706	183753377	(65203045)	C	L1ME3C	LINE/L1	(5512)	1591	869	271591
17	9.7	2.9	2.8	chr1	183805083	183805117	(65151305)	+	(GCTC)n	Simple_repeat	1	36	(0)	271671
13	8.5	4.0	0.0	chr1	183805140	183805164	(65151258)	+	(CGG)n	Simple_repeat	1	26	(0)	271672
2205	19.7	10.7	8.3	chr1	184086413	184086966	(64869456)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	272074
1530	21.0	3.4	6.1	chr1	184095425	184095612	(64860810)	+	MLT1B	LTR/ERVL-MaLR	3	189	(201)	272093
51	7.5	1.4	0.0	chr1	184095613	184095682	(64860740)	+	(TC)n	Simple_repeat	1	71	(0)	272094
1530	21.0	3.4	6.1	chr1	184095683	184095888	(64860534)	+	MLT1B	LTR/ERVL-MaLR	190	386	(4)	272093
1410	27.6	5.2	7.1	chr1	184160371	184160917	(64795505)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	1	272195
733	8.5	1.9	0.0	chr1	184171718	184171823	(64784599)	C	HY1	scRNA	(11)	108	1	272211
544	25.9	10.9	0.0	chr1	184171859	184171947	(64784475)	C	HAL1ME	LINE/L1	(1160)	1305	1203	272209
38	0.0	0.0	0.0	chr1	184171948	184171980	(64784442)	+	(TC)n	Simple_repeat	1	33	(0)	272212
544	25.9	10.9	0.0	chr1	184171981	184172118	(64784304)	C	HAL1ME	LINE/L1	(1263)	1202	1051	272209
745	10.5	4.2	0.0	chr1	184315658	184315771	(64640651)	+	HY1	scRNA	1	119	(0)	272426
27	3.2	0.0	0.0	chr1	184315772	184315803	(64640619)	+	(AG)n	Simple_repeat	1	32	(0)	272427
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
36	0.0	0.0	0.0	chr1	184445344	184445374	(64511048)	+	(CT)n	Simple_repeat	1	31	(0)	272668
23	12.6	0.0	0.0	chr1	184464912	184464946	(64491476)	+	(TC)n	Simple_repeat	1	35	(0)	272692
839	15.4	0.0	0.0	chr1	184464954	184465070	(64491352)	C	AluJr	SINE/Alu	(195)	117	1	272693
1197	23.3	10.4	2.2	chr1	184786692	184786897	(64169525)	+	MLT1H	LTR/ERVL-MaLR	1	234	(315)	273227
46	0.0	0.0	0.0	chr1	184786898	184786936	(64169486)	+	(TC)n	Simple_repeat	1	39	(0)	273228
1197	23.3	10.4	2.2	chr1	184786937	184787053	(64169369)	+	MLT1H	LTR/ERVL-MaLR	235	354	(195)	273227
25	11.8	0.0	0.0	chr1	184967182	184967219	(63989203)	+	(TC)n	Simple_repeat	1	38	(0)	273516
29	0.0	0.0	0.0	chr1	184967220	184967244	(63989178)	+	(TG)n	Simple_repeat	1	25	(0)	273517
13	18.3	0.0	3.0	chr1	185734404	185734436	(63221986)	+	(GGC)n	Simple_repeat	1	33	(0)	274707
50	4.0	0.0	0.0	chr1	190478703	190478754	(58477668)	+	(TC)n	Simple_repeat	1	52	(0)	280953
35	0.0	0.0	2.2	chr1	190706620	190706664	(58249758)	+	(TTTC)n	Simple_repeat	1	45	(0)	281248
2430	9.3	0.0	0.7	chr1	190706665	190706677	(58249745)	C	AluSc	SINE/Alu	(1)	308	296	281249
65	0.0	0.0	0.0	chr1	190706678	190706732	(58249690)	+	(TC)n	Simple_repeat	1	55	(0)	281250
2430	9.3	0.0	0.7	chr1	190706733	190707028	(58249394)	C	AluSc	SINE/Alu	(14)	295	1	281249
59	1.8	0.0	0.0	chr1	193007843	193007897	(55948525)	+	(AG)n	Simple_repeat	1	55	(0)	284204
1677	21.4	0.0	0.0	chr1	193117537	193117817	(55838605)	+	AluJr	SINE/Alu	2	282	(30)	284390
1363	12.0	1.8	7.6	chr1	193117818	193117836	(55838586)	+	L1MCa	LINE/L1	2216	2216	(4292)	284386
32	3.2	0.0	0.0	chr1	193117837	193117868	(55838554)	+	(CA)n	Simple_repeat	1	32	(0)	284391
7562	14.0	2.9	0.6	chr1	193117869	193119289	(55837133)	+	L1MCa	LINE/L1	2216	3672	(2649)	284386
57	9.8	2.3	0.0	chr1	193358214	193358300	(55598122)	+	(GA)n	Simple_repeat	1	89	(0)	284750
42	2.3	2.3	0.0	chr1	194074789	194074832	(54881590)	+	(GA)n	Simple_repeat	1	45	(0)	285659
1156	22.8	12.4	2.0	chr1	196430213	196430378	(52526044)	+	MSTD	LTR/ERVL-MaLR	1	170	(226)	288647
61	6.0	0.0	0.0	chr1	196430379	196430448	(52525974)	+	(TC)n	Simple_repeat	1	70	(0)	288648
1156	22.8	12.4	2.0	chr1	196430449	196430635	(52525787)	+	MSTD	LTR/ERVL-MaLR	171	396	(0)	288647
43	5.7	0.0	0.0	chr1	197453540	197453594	(51502828)	+	(AG)n	Simple_repeat	1	55	(0)	289959
983	18.3	0.0	0.0	chr1	197453595	197453747	(51502675)	C	AluJb	SINE/Alu	(30)	282	130	289960
239	34.8	8.8	11.3	chr1	197535679	197536050	(51420372)	+	MLT1O	LTR/ERVL-MaLR	35	396	(146)	290043
22	19.2	0.0	5.0	chr1	197536053	197536125	(51420297)	+	G-rich	Low_complexity	1	69	(0)	290044
48	1.4	9.1	1.2	chr1	197536126	197536202	(51420220)	+	(GAGAT)n	Simple_repeat	1	84	(0)	290045
2896	19.1	4.3	0.2	chr1	198060741	198061017	(50895405)	C	MLT2B3	LTR/ERVL	(40)	514	221	290710
51	2.1	0.0	0.0	chr1	198061018	198061065	(50895357)	+	(GA)n	Simple_repeat	1	48	(0)	290712
250	33.3	6.2	0.0	chr1	198724539	198724658	(50231764)	C	HAL1ME	LINE/L1	(768)	1697	1570	291609
31	0.0	0.0	0.0	chr1	198724677	198724703	(50231719)	+	(TC)n	Simple_repeat	1	27	(0)	291611
41	0.0	0.0	0.0	chr1	198895604	198895638	(50060784)	+	(AC)n	Simple_repeat	1	35	(0)	291823
17	0.0	0.0	0.0	chr1	198895639	198895657	(50060765)	+	(GA)n	Simple_repeat	1	19	(0)	291824
22	9.5	2.9	0.0	chr1	199405427	199405460	(49550962)	+	(TC)n	Simple_repeat	1	35	(0)	292456
39	6.2	0.0	0.0	chr1	199405473	199405522	(49550900)	+	(GA)n	Simple_repeat	1	50	(0)	292457
2240	16.8	4.3	0.2	chr1	199529317	199529519	(49426903)	+	MSTB1	LTR/ERVL-MaLR	3	220	(212)	292626
59	1.8	0.0	0.0	chr1	199529520	199529574	(49426848)	+	(CT)n	Simple_repeat	1	55	(0)	292627
2240	16.8	4.3	0.2	chr1	199529575	199529770	(49426652)	+	MSTB1	LTR/ERVL-MaLR	221	418	(14)	292626
85	17.0	0.6	2.3	chr1	199941122	199941293	(49015129)	+	GA-rich	Low_complexity	1	173	(0)	293287
21	28.3	0.0	4.0	chr1	200029188	200029261	(48927161)	+	(GC)n	Simple_repeat	1	74	(0)	293523
30	22.1	6.7	0.0	chr1	200039128	200039217	(48917205)	+	GA-rich	Low_complexity	1	96	(0)	293530
65	3.8	1.2	0.0	chr1	200276767	200276847	(48679575)	+	(GA)n	Simple_repeat	1	82	(0)	293913
623	31.9	3.4	3.0	chr1	200276882	200277143	(48679279)	C	L1MC4a	LINE/L1	(1988)	5894	5632	293914
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
2399	8.9	0.3	0.0	chr1	200488024	200488305	(48468117)	+	AluSp	SINE/Alu	1	283	(30)	294358
16	18.9	0.0	0.0	chr1	200866981	200867010	(48089412)	+	(C)n	Simple_repeat	1	30	(0)	295124
204	22.8	5.0	1.7	chr1	200867065	200867122	(48089300)	C	MIR1_Amn	SINE/MIR	(147)	83	24	295125
47	0.0	0.0	0.0	chr1	200917809	200917848	(48038574)	+	(CT)n	Simple_repeat	1	40	(0)	295205
28	0.0	0.0	0.0	chr1	200917849	200917879	(48038543)	+	(AT)n	Simple_repeat	1	31	(0)	295206
204	25.8	15.1	3.1	chr1	201171603	201171730	(47784692)	+	MIRc	SINE/MIR	58	203	(65)	295612
42	0.0	0.0	0.0	chr1	201435916	201435951	(47520471)	+	(TG)n	Simple_repeat	1	36	(0)	296005
20	16.3	0.0	0.0	chr1	201435953	201435987	(47520435)	+	GA-rich	Low_complexity	1	35	(0)	296006
3157	13.7	0.7	1.3	chr1	201528644	201529170	(47427252)	+	MLT2B4	LTR/ERVL	1	539	(21)	296201
45	2.4	0.0	0.0	chr1	201617199	201617241	(47339181)	+	(TC)n	Simple_repeat	1	43	(0)	296374
25	6.3	0.0	0.0	chr1	201617248	201617280	(47339142)	+	(CA)n	Simple_repeat	1	33	(0)	296375
1787	11.9	0.7	1.4	chr1	201702355	201702631	(47253791)	C	AluSq2	SINE/Alu	(1)	312	38	296504
4220	16.0	1.8	1.6	chr1	201702632	201702672	(47253750)	+	L1MB7	LINE/L1	6123	6154	(30)	296503
70	0.0	0.0	0.0	chr1	201702673	201702732	(47253690)	+	(TC)n	Simple_repeat	1	60	(0)	296505
918	24.6	1.4	0.9	chr1	201702745	201702967	(47253455)	+	MIR	SINE/MIR	17	229	(33)	296506
1826	19.1	0.0	1.6	chr1	201923582	201923883	(47032539)	+	AluJb	SINE/Alu	2	299	(13)	296846
47	4.3	0.0	0.0	chr1	201923884	201923932	(47032490)	+	(AG)n	Simple_repeat	1	49	(0)	296847
1826	19.1	0.0	1.6	chr1	201923933	201923943	(47032479)	+	AluJb	SINE/Alu	300	310	(2)	296846
180	16.1	2.2	1.1	chr1	201923947	201924034	(47032388)	+	GA-rich	Low_complexity	1	93	(0)	296848
2426	6.5	0.0	2.6	chr1	201924035	201924342	(47032080)	+	AluYk3	SINE/Alu	1	300	(11)	296849
12	20.3	6.7	0.0	chr1	201947123	201947167	(47009255)	+	(AGATAG)n	Simple_repeat	1	48	(0)	296897
53	2.0	0.0	0.0	chr1	201947176	201947225	(47009197)	+	(GA)n	Simple_repeat	1	50	(0)	296898
15	26.2	5.1	0.0	chr1	201982924	201982982	(46973440)	+	(GGC)n	Simple_repeat	1	62	(0)	296983
491	26.2	11.3	0.0	chr1	202018807	202018955	(46937467)	+	L2b	LINE/L2	3201	3368	(7)	297044
2785	21.4	4.5	8.3	chr1	202500001	202500166	(46456256)	+	L1MA5	LINE/L1	5523	5682	(622)	298024
274	7.7	0.0	0.0	chr1	202500167	202500205	(46456217)	+	tRNA-Glu-GAG	tRNA	2	40	(35)	298025
41	5.7	1.8	1.7	chr1	202500206	202500262	(46456160)	+	(TC)n	Simple_repeat	1	58	(0)	298026
722	13.2	0.9	3.5	chr1	202548655	202548768	(46407654)	+	AluJb	SINE/Alu	141	251	(61)	298094
38	0.0	0.0	0.0	chr1	202548777	202548809	(46407613)	+	(TC)n	Simple_repeat	1	33	(0)	298095
28	15.2	0.0	3.6	chr1	202548810	202548864	(46407558)	+	(AT)n	Simple_repeat	1	55	(0)	298096
73	5.0	0.0	0.0	chr1	202640735	202640817	(46315605)	+	(AGAG)n	Simple_repeat	1	83	(0)	298231
1379	18.6	4.9	16.5	chr1	203094409	203094826	(45861596)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	4	299048
236	32.9	5.3	9.0	chr1	203304936	203305169	(45651253)	C	L2c	LINE/L2	(57)	3330	3106	299384
16	21.5	0.0	5.6	chr1	203305347	203305400	(45651022)	+	G-rich	Low_complexity	1	54	(0)	299385
21	22.3	3.8	0.0	chr1	203514255	203514307	(45442115)	+	(CT)n	Simple_repeat	1	55	(0)	299740
314	19.2	21.1	2.0	chr1	203723393	203723420	(45233002)	C	AluSx3	SINE/Alu	(12)	299	273	300174
62	1.6	1.5	1.5	chr1	203723421	203723485	(45232937)	+	(TC)n	Simple_repeat	1	66	(0)	300175
314	19.2	21.1	2.0	chr1	203723486	203723555	(45232867)	C	AluSx3	SINE/Alu	(39)	272	177	300174
43	0.0	0.0	0.0	chr1	204032072	204032108	(44924314)	+	(AG)n	Simple_repeat	1	37	(0)	300827
12	12.8	8.8	0.0	chr1	204073560	204073593	(44882829)	+	(CCCAG)n	Simple_repeat	1	37	(0)	300929
18	11.9	10.1	4.0	chr1	204073626	204073694	(44882728)	+	(GCCGCGA)n	Simple_repeat	1	76	(0)	300930
12	11.1	0.0	8.6	chr1	204073645	204073661	(44882761)	+	(GCAGGA)n	Simple_repeat	1	51	(0)	300931
21	13.9	0.0	0.0	chr1	204073662	204073701	(44882721)	+	(GAGCCCC)n	Simple_repeat	1	40	(0)	300932
44	4.4	0.0	0.0	chr1	204222021	204222067	(44734355)	+	(TC)n	Simple_repeat	1	47	(0)	301203
1735	18.4	7.2	0.0	chr1	204309355	204309675	(44646747)	+	Tigger3a	DNA/TcMar-Tigger	1	346	(2)	301322
738	16.4	8.1	0.6	chr1	204692837	204692995	(44263427)	C	MER96	DNA/hAT-Tip100	(1)	174	3	302079
91	2.3	1.1	0.0	chr1	204693045	204693134	(44263288)	+	(AG)n	Simple_repeat	1	91	(0)	302080
37	2.8	0.0	0.0	chr1	205427485	205427520	(43528902)	+	(GA)n	Simple_repeat	1	36	(0)	303425
574	28.5	3.8	0.0	chr1	205496098	205496276	(43460146)	C	MIR	SINE/MIR	(0)	262	77	303551
72	1.5	0.0	0.0	chr1	205496328	205496393	(43460029)	+	(TC)n	Simple_repeat	1	66	(0)	303552
35	0.0	0.0	0.0	chr1	205700970	205700999	(43255423)	+	(TC)n	Simple_repeat	1	30	(0)	303952
1856	15.5	6.3	1.4	chr1	207167762	207167919	(41788503)	+	MLT1A0	LTR/ERVL-MaLR	1	176	(189)	306297
50	6.9	0.0	0.0	chr1	207167920	207167980	(41788442)	+	(TC)n	Simple_repeat	1	61	(0)	306298
1856	15.5	6.3	1.4	chr1	207167981	207168168	(41788254)	+	MLT1A0	LTR/ERVL-MaLR	177	364	(1)	306297
45	2.4	0.0	0.0	chr1	207824032	207824074	(41132348)	+	(CT)n	Simple_repeat	1	43	(0)	307172
40	4.8	0.0	0.0	chr1	208086938	208086980	(40869442)	+	(TC)n	Simple_repeat	1	43	(0)	307578
333	30.8	3.7	3.1	chr1	208203713	208203873	(40752549)	+	MIRc	SINE/MIR	88	249	(19)	307770
35	2.8	0.0	0.0	chr1	208244300	208244336	(40712086)	+	(GCG)n	Simple_repeat	1	37	(0)	307822
12	14.0	7.3	2.3	chr1	208244413	208244453	(40711969)	+	(CCGCGG)n	Simple_repeat	1	44	(0)	307823
17	23.0	0.0	4.9	chr1	208244441	208244501	(40711921)	+	(CCGCCC)n	Simple_repeat	1	61	(0)	307824
18	26.0	2.2	5.4	chr1	208244454	208244502	(40711920)	+	(CCCG)n	Simple_repeat	2	93	(0)	307825
46	4.3	0.0	0.0	chr1	208272647	208272694	(40683728)	+	(TC)n	Simple_repeat	1	48	(0)	307879
17	7.0	6.5	0.0	chr1	208272696	208272712	(40683710)	+	(TG)n	Simple_repeat	1	17	(0)	307880
40	0.0	0.0	0.0	chr1	208272713	208272746	(40683676)	+	(GA)n	Simple_repeat	1	34	(0)	307881
17	7.0	6.5	0.0	chr1	208272747	208272759	(40683663)	+	(TG)n	Simple_repeat	2	16	(0)	307882
215	31.2	10.7	5.2	chr1	208816701	208816815	(40139607)	C	MIR3	SINE/MIR	(5)	203	82	308724
47	0.0	0.0	0.0	chr1	208816864	208816903	(40139519)	+	(GA)n	Simple_repeat	1	40	(0)	308725
2609	7.9	0.0	0.0	chr1	208816927	208817230	(40139192)	C	AluYh3	SINE/Alu	(7)	304	1	308726
1416	20.8	1.1	9.5	chr1	209126642	209126835	(39829587)	+	MLT1A	LTR/ERVL-MaLR	1	181	(193)	309188
55	3.7	0.0	0.0	chr1	209126836	209126891	(39829531)	+	(CT)n	Simple_repeat	1	56	(0)	309189
1416	20.8	1.1	9.5	chr1	209126892	209127105	(39829317)	+	MLT1A	LTR/ERVL-MaLR	182	374	(0)	309188
57	1.8	1.8	0.0	chr1	209634918	209634974	(39321448)	+	(TC)n	Simple_repeat	1	58	(0)	309960
46	2.3	0.0	0.0	chr1	209674668	209674711	(39281711)	+	(TC)n	Simple_repeat	1	44	(0)	310026
25	0.0	0.0	0.0	chr1	209674712	209674739	(39281683)	+	(AC)n	Simple_repeat	1	28	(0)	310027
21	4.0	0.0	0.0	chr1	209937533	209937558	(39018864)	+	(GT)n	Simple_repeat	1	26	(0)	310408
35	0.0	0.0	0.0	chr1	209937559	209937588	(39018834)	+	(GA)n	Simple_repeat	1	30	(0)	310409
21	8.8	0.0	2.6	chr1	209937687	209937724	(39018698)	+	(CAAAA)n	Simple_repeat	1	38	(0)	310410
36	2.9	0.0	0.0	chr1	210223770	210223804	(38732618)	+	(TC)n	Simple_repeat	1	35	(0)	310811
11	17.3	0.0	5.6	chr1	210233996	210234031	(38722391)	+	(AATAAG)n	Simple_repeat	1	36	(0)	310826
801	23.0	4.6	4.6	chr1	210536760	210536978	(38419444)	C	MER20	DNA/hAT-Charlie	(0)	219	1	311318
2287	10.8	0.0	0.4	chr1	211218800	211219076	(37737346)	+	AluSx3	SINE/Alu	1	276	(35)	312299
55	0.0	0.0	0.0	chr1	211219078	211219124	(37737298)	+	(TC)n	Simple_repeat	1	47	(0)	312300
27	0.0	0.0	0.0	chr1	211219125	211219154	(37737268)	+	(AT)n	Simple_repeat	1	30	(0)	312301
621	9.6	0.0	0.0	chr1	211219182	211219254	(37737168)	+	AluSx3	SINE/Alu	216	288	(23)	312302
550	14.4	12.8	7.2	chr1	211591950	211592074	(37364348)	C	FLAM_C	SINE/Alu	(10)	133	1	312999
181	32.4	5.6	2.2	chr1	211592093	211592231	(37364191)	C	MIR3	SINE/MIR	(5)	203	60	313000
868	11.2	1.5	3.0	chr1	211676076	211676209	(37280213)	+	AluSz6	SINE/Alu	5	136	(176)	313175
2052	11.4	1.3	4.1	chr1	211676210	211676524	(37279898)	+	AluSz6	SINE/Alu	1	306	(6)	313176
8776	6.6	1.2	1.5	chr1	211687892	211689054	(37267368)	+	Harlequin-int	LTR/ERV1	263	1422	(5474)	313200
458	33.7	10.8	5.7	chr1	212088343	212088780	(36867642)	C	L2c	LINE/L2	(8)	3379	2917	313886
1659	15.8	1.0	9.6	chr1	212354399	212354721	(36601701)	+	AluJr4	SINE/Alu	3	297	(15)	314385
20	0.0	0.0	0.0	chr1	212354726	212354747	(36601675)	+	(GA)n	Simple_repeat	1	22	(0)	314386
1522	12.9	8.4	3.2	chr1	212354772	212355052	(36601370)	+	Tigger3a	DNA/TcMar-Tigger	52	348	(0)	314387
184	31.2	6.8	7.2	chr1	212535102	212535322	(36421100)	+	L2	LINE/L2	2385	2604	(815)	314700
194	25.5	0.0	0.0	chr1	212535342	212535388	(36421034)	C	L2c	LINE/L2	(10)	3377	3331	314701
54	9.5	1.3	0.0	chr1	212535410	212535488	(36420934)	+	(AG)n	Simple_repeat	1	80	(0)	314702
212	29.3	3.5	2.4	chr1	212535489	212535572	(36420850)	C	L2c	LINE/L2	(70)	3317	3233	314701
1563	14.4	7.4	3.2	chr1	212639371	212639655	(36316767)	+	AluJb	SINE/Alu	1	298	(14)	314890
82	19.8	2.6	0.6	chr1	212639656	212639854	(36316568)	+	GA-rich	Low_complexity	1	203	(0)	314891
29	0.0	0.0	0.0	chr1	212987032	212987056	(35969366)	+	(AG)n	Simple_repeat	1	25	(0)	315542
2274	10.4	0.3	0.0	chr1	213137344	213137632	(35818790)	C	AluSp	SINE/Alu	(23)	290	1	315780
17	20.1	0.0	4.1	chr1	213137691	213137739	(35818683)	+	(TTTG)n	Simple_repeat	1	49	(0)	315781
30	0.0	0.0	0.0	chr1	213137753	213137778	(35818644)	+	(CT)n	Simple_repeat	1	26	(0)	315782
19	0.0	0.0	0.0	chr1	213137779	213137799	(35818623)	+	(AT)n	Simple_repeat	1	21	(0)	315783
28	0.0	0.0	0.0	chr1	213137800	213137826	(35818596)	+	(T)n	Simple_repeat	1	27	(0)	315784
40	7.8	0.0	0.0	chr1	213769493	213769546	(35186876)	+	(GA)n	Simple_repeat	1	54	(0)	316730
50	4.7	0.0	5.4	chr1	213953615	213953688	(35002734)	+	(TC)n	Simple_repeat	1	74	(0)	316992
730	21.3	13.2	3.1	chr1	213962689	213962911	(34993511)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	200	317005
43	4.5	0.0	0.0	chr1	213962912	213962957	(34993465)	+	(GA)n	Simple_repeat	1	46	(0)	317006
27	16.8	0.0	1.8	chr1	213984710	213984766	(34971656)	+	(GGTGGT)n	Simple_repeat	1	57	(0)	317034
3520	27.7	12.7	5.9	chr1	214099956	214100723	(34855699)	C	L2a	LINE/L2	(18)	3408	2592	317180
33	3.1	0.0	0.0	chr1	214100724	214100756	(34855666)	+	(AG)n	Simple_repeat	1	33	(0)	317181
3520	27.5	13.3	6.6	chr1	214100757	214100998	(34855424)	C	L2a	LINE/L2	(828)	2591	2341	317180
37	0.0	0.0	0.0	chr1	214292090	214292121	(34664301)	+	(GA)n	Simple_repeat	1	32	(0)	317506
27	6.0	0.0	0.0	chr1	214392184	214392218	(34564204)	+	(GA)n	Simple_repeat	1	35	(0)	317626
622	35.1	1.3	2.4	chr1	214439734	214440110	(34516312)	C	CR1_Mam	LINE/CR1	(612)	1592	1220	317695
48	0.0	0.0	0.0	chr1	214457993	214458035	(34498387)	+	(ATCTAT)n	Simple_repeat	1	43	(0)	317726
22	3.8	0.0	0.0	chr1	214458039	214458065	(34498357)	+	(AG)n	Simple_repeat	1	27	(0)	317727
1732	17.9	1.8	1.1	chr1	214458066	214458345	(34498077)	C	AluJo	SINE/Alu	(30)	282	1	317728
2366	10.6	0.0	0.0	chr1	214523848	214524148	(34432274)	C	AluSx	SINE/Alu	(10)	302	2	317833
2503	16.6	6.9	7.3	chr1	214711485	214711597	(34244825)	C	L1MD1	LINE/L1	(3086)	3451	3342	318085
82	3.8	0.0	0.0	chr1	214711598	214711680	(34244742)	+	(AG)n	Simple_repeat	1	83	(0)	318098
1735	18.0	0.7	1.1	chr1	214711681	214711958	(34244464)	C	AluJb	SINE/Alu	(34)	278	2	318099
2243	17.1	4.2	4.0	chr1	214866342	214866540	(34089882)	C	MSTA	LTR/ERVL-MaLR	(220)	208	1	318303
243	34.0	8.0	2.0	chr1	215582085	215582378	(33374044)	C	L1M5	LINE/L1	(1122)	5024	4712	319266
3313	14.4	5.2	2.1	chr1	215773026	215773476	(33182946)	+	LTR9	LTR/ERV1	1	456	(156)	319542
60	6.9	0.0	0.0	chr1	215773477	215773552	(33182870)	+	(TCTC)n	Simple_repeat	1	76	(0)	319543
3313	15.7	5.1	3.1	chr1	215773553	215773698	(33182724)	+	LTR9	LTR/ERV1	457	600	(12)	319542
426	29.8	8.3	11.4	chr1	216245156	216245454	(32710968)	+	MLT1O	LTR/ERVL-MaLR	15	303	(239)	320130
56	0.0	0.0	0.0	chr1	216245471	216245518	(32710904)	+	(GA)n	Simple_repeat	1	48	(0)	320131
23	3.7	0.0	0.0	chr1	217732085	217732112	(31224310)	+	(TC)n	Simple_repeat	1	28	(0)	322160
993	17.7	2.9	2.0	chr1	218574823	218575024	(30381398)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	162	323482
47	15.8	0.0	0.0	chr1	218575025	218575109	(30381313)	+	GA-rich	Low_complexity	1	85	(0)	323483
480	22.3	0.0	1.8	chr1	218575110	218575223	(30381199)	C	MLT1A0	LTR/ERVL-MaLR	(185)	180	69	323482
56	0.0	0.0	0.0	chr1	218678403	218678450	(30277972)	+	(TC)n	Simple_repeat	1	48	(0)	323624
623	11.1	20.9	0.0	chr1	219229177	219229293	(29727129)	+	LTR1A2	LTR/ERV1	2	149	(688)	324319
51	0.0	0.0	0.0	chr1	219229295	219229338	(29727084)	+	(GA)n	Simple_repeat	1	44	(0)	324320
3426	11.3	1.6	0.0	chr1	219229342	219229827	(29726595)	+	LTR1A2	LTR/ERV1	344	837	(0)	324319
1432	26.1	4.2	11.2	chr1	219596174	219596390	(29360032)	+	MLT1F2	LTR/ERVL-MaLR	2	222	(338)	324845
43	0.0	0.0	0.0	chr1	219596391	219596427	(29359995)	+	(TC)n	Simple_repeat	1	37	(0)	324846
1432	26.1	4.2	11.2	chr1	219596428	219596540	(29359882)	+	MLT1F2	LTR/ERVL-MaLR	223	289	(271)	324845
2420	9.0	0.0	0.0	chr1	219596541	219596840	(29359582)	+	AluSc8	SINE/Alu	2	301	(10)	324847
718	34.4	7.7	3.0	chr1	219697630	219698036	(29258386)	C	L2b	LINE/L2	(0)	3375	2948	324997
22	16.8	0.0	0.0	chr1	219698113	219698154	(29258268)	+	(ATG)n	Simple_repeat	1	42	(0)	324998
41	0.0	0.0	0.0	chr1	219698184	219698218	(29258204)	+	(CT)n	Simple_repeat	1	35	(0)	324999
21	0.0	0.0	0.0	chr1	219698219	219698241	(29258181)	+	(GC)n	Simple_repeat	1	23	(0)	325000
2286	11.4	0.0	0.0	chr1	219698242	219698538	(29257884)	C	AluSx	SINE/Alu	(3)	309	13	325001
38	0.0	0.0	0.0	chr1	219921873	219921905	(29034517)	+	(GT)n	Simple_repeat	1	33	(0)	325324
48	6.7	0.0	0.0	chr1	219921908	219921970	(29034452)	+	(AG)n	Simple_repeat	1	63	(0)	325325
1000	17.9	0.6	0.0	chr1	219921978	219922133	(29034289)	C	AluJr	SINE/Alu	(36)	276	120	325326
796	26.5	4.7	2.7	chr1	220448971	220449265	(28507157)	+	MLT1J	LTR/ERVL-MaLR	212	512	(0)	326239
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
1551	23.2	7.9	11.4	chr1	220586990	220587257	(28369165)	C	L1ME3C	LINE/L1	(0)	6123	5827	326462
44	2.3	0.0	0.0	chr1	220587258	220587302	(28369120)	+	(TTCC)n	Simple_repeat	1	45	(0)	326463
45	6.0	0.0	0.0	chr1	220587313	220587364	(28369058)	+	(CT)n	Simple_repeat	1	52	(0)	326464
2440	8.6	0.3	0.3	chr1	220587368	220587669	(28368753)	C	AluSq2	SINE/Alu	(11)	302	1	326465
11	20.1	2.9	0.0	chr1	220690463	220690496	(28265926)	+	G-rich	Low_complexity	1	35	(0)	326595
13	21.5	4.0	1.9	chr1	220879536	220879585	(28076837)	+	(CCGGCTC)n	Simple_repeat	1	52	(0)	326859
1436	21.1	7.6	3.1	chr1	220964280	220964431	(27991991)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	196	326973
41	2.6	0.0	0.0	chr1	220964432	220964471	(27991951)	+	(GA)n	Simple_repeat	1	40	(0)	326974
1436	21.1	7.6	3.1	chr1	220964472	220964671	(27991751)	C	MLT1A	LTR/ERVL-MaLR	(179)	195	1	326973
21	0.0	0.0	0.0	chr1	221055973	221055995	(27900427)	+	(TG)n	Simple_repeat	1	23	(0)	327092
49	4.1	0.0	0.0	chr1	221055996	221056046	(27900376)	+	(GA)n	Simple_repeat	1	51	(0)	327093
14	8.7	0.0	3.7	chr1	221228952	221228978	(27727444)	+	(CTC)n	Simple_repeat	1	27	(0)	327343
16	22.6	5.6	0.0	chr1	221717427	221717452	(27238970)	+	A-rich	Low_complexity	1	56	(0)	328066
20	7.8	0.0	0.0	chr1	221717453	221717479	(27238943)	+	(AG)n	Simple_repeat	1	27	(0)	328067
2851	20.0	4.1	4.1	chr1	222010967	222011345	(26945077)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	199	328507
32	3.2	0.0	0.0	chr1	222011346	222011377	(26945045)	+	(GA)n	Simple_repeat	1	32	(0)	328508
2851	20.0	4.1	4.1	chr1	222011378	222011564	(26944858)	C	MLT1F1	LTR/ERVL-MaLR	(371)	198	3	328507
6809	20.7	6.2	3.4	chr1	222256717	222257981	(26698441)	C	Charlie10	DNA/hAT-Charlie	(812)	2010	698	328859
258	23.7	17.7	2.1	chr1	222262824	222262918	(26693504)	+	L2c	LINE/L2	3211	3323	(64)	328866
18	10.7	0.0	5.9	chr1	222262986	222263019	(26693403)	+	(CA)n	Simple_repeat	1	34	(0)	328867
51	10.5	2.4	1.2	chr1	222263019	222263102	(26693320)	+	(AG)n	Simple_repeat	1	86	(0)	328868
550	16.4	3.3	2.5	chr1	223133391	223133509	(25822913)	C	MER5A1	DNA/hAT-Charlie	(33)	133	14	330256
54	2.0	0.0	0.0	chr1	223141823	223141873	(25814549)	+	(AG)n	Simple_repeat	1	51	(0)	330274
350	26.7	8.8	6.2	chr1	223141908	223142051	(25814371)	C	MamRep38	DNA/hAT	(124)	171	24	330275
12	0.0	3.9	7.4	chr1	223364314	223364339	(25592083)	+	(GCG)n	Simple_repeat	1	27	(0)	330584
8475	6.1	0.4	0.5	chr1	223517924	223519189	(25437233)	+	L1PB	LINE/L1	4242	5505	(646)	330829
1899	20.1	2.7	5.3	chr1	223524883	223525443	(25430979)	C	MER41B	LTR/ERV1	(12)	543	1	330842
41	15.1	5.5	0.0	chr1	223533889	223533979	(25422443)	+	(CTCT)n	Simple_repeat	1	96	(0)	330860
45	15.8	0.0	0.0	chr1	223630240	223630316	(25326106)	+	(CT)n	Simple_repeat	1	77	(0)	330931
1948	17.2	0.3	0.7	chr1	223630339	223630635	(25325787)	C	AluJb	SINE/Alu	(16)	296	1	330932
341	27.4	4.0	1.0	chr1	223706619	223706714	(25249708)	+	MIRb	SINE/MIR	116	214	(54)	331073
46	6.5	3.1	0.0	chr1	223707237	223707300	(25249122)	+	(TC)n	Simple_repeat	1	66	(0)	331075
386	27.3	9.2	0.0	chr1	223713788	223713915	(25242507)	+	MIR1_Amn	SINE/MIR	6	146	(84)	331091
382	31.6	15.4	3.2	chr1	223713940	223714285	(25242137)	+	L2c	LINE/L2	2956	3351	(36)	331092
2253	10.4	0.0	0.7	chr1	223719260	223719556	(25236866)	+	AluSx1	SINE/Alu	6	300	(12)	331103
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
97	16.8	3.4	0.7	chr1	224172321	224172588	(24783834)	+	GA-rich	Low_complexity	1	275	(0)	331948
663	25.5	2.3	4.8	chr1	224275042	224275268	(24681154)	+	Charlie15b	DNA/hAT-Charlie	705	925	(136)	332213
377	18.1	2.7	0.0	chr1	224275584	224275655	(24680767)	+	MADE2	DNA/TcMar-Mariner	7	80	(0)	332214
360	34.2	12.9	1.5	chr1	224317312	224317572	(24638850)	C	L2c	LINE/L2	(116)	3271	2977	332318
195	34.9	0.0	1.5	chr1	224317608	224317674	(24638748)	C	L2c	LINE/L2	(556)	2863	2798	332318
2157	6.5	0.0	0.8	chr1	224362086	224362345	(24594077)	C	AluY	SINE/Alu	(17)	294	37	332425
931	26.8	7.8	9.6	chr1	224362346	224362487	(24593935)	C	HAL1	LINE/L1	(1013)	1494	1384	332424
2211	8.6	4.3	1.4	chr1	224362488	224362779	(24593643)	C	AluY	SINE/Alu	(10)	301	1	332426
6725	11.5	12.7	6.8	chr1	224656095	224657352	(24299070)	C	LOR1-int	LTR/ERV1	(2)	8118	6776	332935
8036	11.6	9.7	8.8	chr1	224657358	224657409	(24299013)	C	LOR1-int	LTR/ERV1	(2697)	5423	5360	332936
29	0.0	0.0	0.0	chr1	224657410	224657434	(24298988)	+	(AG)n	Simple_repeat	1	25	(0)	332937
8036	11.6	9.7	8.8	chr1	224657435	224657783	(24298639)	C	LOR1-int	LTR/ERV1	(2761)	5359	4970	332936
200	25.3	3.9	2.6	chr1	224873723	224873799	(24082623)	C	MIR3	SINE/MIR	(62)	146	69	333291
1363	20.5	8.2	3.5	chr1	224873854	224874201	(24082221)	C	MER57E1	LTR/ERV1	(2)	370	5	333292
741	27.2	10.2	6.2	chr1	224884251	224884559	(24071863)	C	LTR40A1	LTR/ERVL	(107)	477	155	333316
430	20.1	10.7	11.7	chr1	224884631	224884810	(24071612)	C	LTR40A1	LTR/ERVL	(386)	198	21	333316
1897	13.8	13.8	1.1	chr1	225078585	225078768	(23877654)	+	MSTA	LTR/ERVL-MaLR	1	212	(216)	333550
137	2.4	0.0	0.0	chr1	225078769	225078898	(23877524)	+	(TC)n	Simple_repeat	1	130	(0)	333551
1897	13.8	13.8	1.1	chr1	225078899	225079086	(23877336)	+	MSTA	LTR/ERVL-MaLR	213	428	(0)	333550
34	5.5	0.0	0.0	chr1	225144894	225144931	(23811491)	+	(TG)n	Simple_repeat	1	38	(0)	333612
42	17.0	0.0	0.0	chr1	225144934	225145012	(23811410)	+	GA-rich	Low_complexity	1	79	(0)	333613
304	32.8	6.8	5.8	chr1	225366138	225366325	(23590097)	+	L1M5	LINE/L1	5458	5647	(477)	333862
17	0.0	4.8	0.0	chr1	225366399	225366419	(23590003)	+	(CT)n	Simple_repeat	1	22	(0)	333863
726	23.9	11.3	1.0	chr1	225366524	225366722	(23589700)	+	LTR40A1	LTR/ERVL	2	223	(361)	333864
2115	16.8	2.5	4.7	chr1	225405346	225405750	(23550672)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	333930
341	26.7	15.6	1.5	chr1	225454227	225454363	(23502059)	C	L2a	LINE/L2	(0)	3426	3267	333996
3239	16.1	5.7	0.2	chr1	225462619	225463184	(23493238)	+	LTR26	LTR/ERV1	5	603	(0)	334009
180	14.3	5.4	0.0	chr1	225509582	225509616	(23446806)	+	AmnSINE1	SINE/5S-Deu-L2	346	382	(193)	334076
419	36.5	5.0	5.3	chr1	225655551	225655911	(23300511)	C	MER130	DNA	(141)	1453	1094	334309
2223	10.2	0.7	0.7	chr1	225658829	225659122	(23297300)	+	AluSp	SINE/Alu	3	296	(17)	334318
35	6.8	0.0	0.0	chr1	225659124	225659168	(23297254)	+	(GA)n	Simple_repeat	1	45	(0)	334319
61	0.0	1.6	1.6	chr1	225659169	225659231	(23297191)	+	(AGAA)n	Simple_repeat	1	64	(0)	334320
370	18.3	2.7	1.4	chr1	225965715	225965786	(22990636)	+	MER66C	LTR/ERV1	371	443	(112)	334912
50	0.0	0.0	0.0	chr1	225965789	225965831	(22990591)	+	(AG)n	Simple_repeat	1	43	(0)	334913
8215	7.2	1.6	0.0	chr1	225965843	225966858	(22989564)	+	LTR5A	LTR/ERVK	1	1033	(0)	334914
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
2225	10.1	3.6	0.0	chr1	226074974	226075270	(22881152)	C	AluSx	SINE/Alu	(4)	308	1	335144
203	31.6	17.5	2.8	chr1	226075271	226075395	(22881027)	+	L2a	LINE/L2	3270	3423	(3)	335142
2181	7.8	0.0	1.1	chr1	226123000	226123282	(22833140)	C	AluSx1	SINE/Alu	(22)	290	11	335250
1603	19.6	5.6	0.0	chr1	226126874	226127144	(22829278)	+	AluJo	SINE/Alu	1	287	(25)	335257
18	10.2	6.8	2.1	chr1	226186453	226186496	(22769926)	+	(GCC)n	Simple_repeat	1	47	(0)	335385
433	26.1	10.9	5.3	chr1	226310490	226310679	(22645743)	+	MIR	SINE/MIR	28	229	(33)	335646
12	11.6	3.3	3.2	chr1	226310871	226310900	(22645522)	+	GA-rich	Low_complexity	1	31	(0)	335647
16	5.2	0.0	0.0	chr1	226723565	226723584	(22232838)	+	(GT)n	Simple_repeat	1	20	(0)	336343
1081	27.6	9.0	4.3	chr1	226753502	226754270	(22202152)	C	L2a	LINE/L2	(4)	3422	2596	336397
30	12.1	0.0	0.0	chr1	226754277	226754329	(22202093)	+	(CT)n	Simple_repeat	1	53	(0)	336398
415	14.5	2.8	0.0	chr1	226754375	226754443	(22201979)	+	Tigger1	DNA/TcMar-Tigger	30	100	(2318)	336399
359	26.3	13.6	0.0	chr1	226771580	226771712	(22184710)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	442	336440
34	0.0	0.0	0.0	chr1	226771716	226771744	(22184678)	+	(CT)n	Simple_repeat	1	29	(0)	336441
20	17.0	0.0	6.7	chr1	226870544	226870603	(22085819)	+	G-rich	Low_complexity	1	60	(0)	336618
16	16.4	5.0	4.8	chr1	226870678	226870737	(22085685)	+	(GGCCTGG)n	Simple_repeat	1	63	(0)	336619
101	3.1	0.0	0.0	chr1	226944693	226944791	(22011631)	+	(GA)n	Simple_repeat	1	99	(0)	336734
2362	23.3	17.9	2.1	chr1	227251737	227253173	(21703249)	+	L1MEg	LINE/L1	2584	4607	(1539)	337158
57	6.0	5.8	0.0	chr1	227253182	227253268	(21703154)	+	(AG)n	Simple_repeat	1	92	(0)	337160
1846	14.1	0.0	0.0	chr1	227253350	227253604	(21702818)	+	AluSx1	SINE/Alu	37	291	(21)	337161
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
585	29.6	1.9	3.0	chr1	227328914	227329181	(21627241)	+	Charlie30a	DNA/hAT-Charlie	73	337	(454)	337304
289	25.4	0.0	0.0	chr1	227329186	227329244	(21627178)	C	L2b	LINE/L2	(0)	3375	3317	337305
18	26.0	4.2	1.4	chr1	227329275	227329287	(21627135)	+	(TC)n	Simple_repeat	1	14	(0)	337306
1861	16.2	0.3	4.9	chr1	227329288	227329474	(21626948)	C	AluJb	SINE/Alu	(2)	310	125	337307
1804	15.6	0.3	3.0	chr1	227331114	227331391	(21625031)	+	AluJr4	SINE/Alu	1	274	(38)	337314
50	0.0	0.0	0.0	chr1	227331392	227331434	(21624988)	+	(AG)n	Simple_repeat	1	43	(0)	337315
1804	15.6	0.3	3.0	chr1	227331435	227331456	(21624966)	+	AluJr4	SINE/Alu	275	293	(19)	337314
2061	7.6	9.3	0.0	chr1	227331457	227331720	(21624702)	C	AluSx1	SINE/Alu	(21)	291	1	337316
1575	15.6	4.8	0.8	chr1	227433501	227433757	(21522665)	+	AluJr	SINE/Alu	6	273	(39)	337509
74	10.4	3.9	0.8	chr1	227433760	227433911	(21522511)	+	GA-rich	Low_complexity	1	156	(0)	337510
14	25.0	2.1	0.0	chr1	227560016	227560062	(21396360)	+	(CTCTCT)n	Simple_repeat	1	48	(0)	337641
30	10.3	1.9	0.0	chr1	227560096	227560147	(21396275)	+	(TC)n	Simple_repeat	1	53	(0)	337642
39	34.1	1.1	1.7	chr1	227560177	227560355	(21396067)	+	(CTCTTT)n	Simple_repeat	1	181	(0)	337643
260	20.1	2.1	1.6	chr1	228023266	228023457	(20932965)	+	HERVIP10FH-int	LTR/ERV1	802	994	(4108)	338190
22	22.6	2.4	4.7	chr1	228082878	228082977	(20873445)	+	G-rich	Low_complexity	1	97	(0)	338274
13	27.9	2.9	2.9	chr1	228102203	228102270	(20854152)	+	(CCCGC)n	Simple_repeat	1	70	(0)	338291
20	21.8	5.4	4.1	chr1	228102774	228102876	(20853546)	+	(CCCGC)n	Simple_repeat	1	104	(0)	338292
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
645	15.3	17.5	0.0	chr1	228103818	228103954	(20852468)	+	FRAM	SINE/Alu	1	166	(10)	338295
14	18.4	0.0	0.0	chr1	228109057	228109087	(20847335)	+	(CCCT)n	Simple_repeat	1	31	(0)	338301
18	24.5	0.0	0.0	chr1	228646795	228646837	(20309585)	+	(CA)n	Simple_repeat	1	43	(0)	338981
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
265	21.3	0.0	1.3	chr1	228648755	228648830	(20307592)	C	Arthur1	DNA/hAT-Tip100	(755)	3192	3118	338984
1659	16.7	0.7	0.4	chr1	228648831	228649160	(20307262)	C	AluSx	SINE/Alu	(0)	312	5	338985
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
33	0.0	0.0	0.0	chr1	228756282	228756309	(20200113)	+	(GA)n	Simple_repeat	1	28	(0)	339141
241	22.2	19.0	2.4	chr1	228772733	228772898	(20183524)	+	L1ME3A	LINE/L1	5973	6172	(1)	339169
33	0.0	0.0	0.0	chr1	228772912	228772939	(20183483)	+	(CA)n	Simple_repeat	1	28	(0)	339170
26	20.1	0.0	0.0	chr1	228772940	228772990	(20183432)	+	GA-rich	Low_complexity	1	51	(0)	339171
217	16.3	2.0	3.9	chr1	228772994	228773044	(20183378)	C	MIRc	SINE/MIR	(52)	216	167	339172
1235	15.8	3.6	6.0	chr1	229121724	229121932	(19834490)	+	MER44A	DNA/TcMar-Tigger	57	257	(82)	339728
2181	15.9	5.1	1.9	chr1	229121933	229122349	(19834073)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	339729
1581	17.1	0.0	0.8	chr1	229206755	229207000	(19749422)	+	AluJr4	SINE/Alu	44	287	(25)	339849
22	11.7	0.0	0.0	chr1	229207001	229207037	(19749385)	+	(GAGA)n	Simple_repeat	1	37	(0)	339850
1999	12.0	11.3	3.9	chr1	229218445	229218826	(19737596)	C	LTR24C	LTR/ERV1	(1)	634	221	339879
249	20.6	8.5	5.8	chr1	229225493	229225595	(19730827)	C	MER129	LTR?	(168)	301	196	339893
39	16.9	1.3	1.3	chr1	229249055	229249130	(19707292)	+	GA-rich	Low_complexity	1	77	(0)	339942
28	0.0	12.5	0.0	chr1	229342108	229342155	(19614267)	+	(CCGCGTCCT)n	Simple_repeat	1	54	(0)	340085
13	12.2	2.4	7.1	chr1	229342214	229342254	(19614168)	+	G-rich	Low_complexity	1	42	(0)	340086
60	0.0	0.0	0.0	chr1	229435462	229435512	(19520910)	+	(CT)n	Simple_repeat	1	51	(0)	340258
437	16.4	3.2	4.7	chr1	229559920	229560047	(19396375)	C	MER96B	DNA/hAT	(39)	378	253	340499
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
952	31.1	7.3	6.0	chr1	229889456	229889896	(19066526)	+	ERV3-16A3_I-int	LTR/ERVL	1906	2378	(2848)	341083
49	2.2	0.0	0.0	chr1	229889897	229889942	(19066480)	+	(TC)n	Simple_repeat	1	46	(0)	341085
2131	11.5	0.0	1.1	chr1	229889944	229890230	(19066192)	C	AluSx	SINE/Alu	(28)	284	1	341086
3776	23.4	6.8	1.8	chr1	229948803	229949912	(19006510)	+	L1M5	LINE/L1	3875	5043	(1103)	341175
2954	22.6	6.8	7.8	chr1	230039539	230039916	(18916506)	C	L1M5	LINE/L1	(2256)	3890	3518	341329
54	2.0	0.0	0.0	chr1	230039917	230039967	(18916455)	+	(TC)n	Simple_repeat	1	51	(0)	341334
12	18.1	0.0	3.0	chr1	230067368	230067400	(18889022)	+	(GCGCCG)n	Simple_repeat	1	33	(0)	341373
20	20.9	4.4	5.3	chr1	230067416	230067506	(18888916)	+	(GCCCCCT)n	Simple_repeat	1	95	(0)	341374
36	2.4	2.4	0.0	chr1	230069258	230069299	(18887123)	+	(TTTGT)n	Simple_repeat	1	43	(0)	341376
36	2.9	0.0	0.0	chr1	230156211	230156245	(18800177)	+	(GA)n	Simple_repeat	1	35	(0)	341483
21	0.0	0.0	0.0	chr1	230156246	230156268	(18800154)	+	(TG)n	Simple_repeat	1	23	(0)	341484
18	22.0	0.0	0.0	chr1	230292695	230292731	(18663691)	+	(T)n	Simple_repeat	1	37	(0)	341658
251	34.2	17.2	0.7	chr1	230787065	230787272	(18169150)	C	L2b	LINE/L2	(6)	3381	3154	342413
18	18.6	3.3	4.8	chr1	230978506	230978565	(17977857)	+	(GCC)n	Simple_repeat	1	62	(0)	342719
13	21.0	0.0	4.8	chr1	230978606	230978647	(17977775)	+	(GCC)n	Simple_repeat	1	42	(0)	342719
15	17.6	0.0	0.0	chr1	230978633	230978664	(17977758)	+	(CTG)n	Simple_repeat	1	32	(0)	342720
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
12	17.9	3.1	0.0	chr1	231039984	231040015	(17916407)	+	(CGCCCG)n	Simple_repeat	1	33	(0)	342810
1040	27.2	4.3	4.3	chr1	231193322	231193503	(17762919)	+	MLT1A	LTR/ERVL-MaLR	1	192	(182)	343075
56	0.0	2.0	0.0	chr1	231193504	231193554	(17762868)	+	(CT)n	Simple_repeat	1	52	(0)	343076
1040	27.2	4.3	4.3	chr1	231193555	231193583	(17762839)	+	MLT1A	LTR/ERVL-MaLR	193	219	(155)	343075
2203	15.3	4.2	2.4	chr1	231193584	231194005	(17762417)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	1	343077
1330	30.1	6.4	2.9	chr1	231383087	231383358	(17573064)	+	LTR82B	LTR/ERVL	558	829	(1)	343392
294	34.8	10.0	5.1	chr1	231418420	231418581	(17537841)	+	MIRb	SINE/MIR	10	190	(78)	343467
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
1749	28.1	1.7	2.5	chr1	231465467	231466087	(17490335)	+	MLT1F-int	LTR/ERVL-MaLR	385	1024	(465)	343532
297	19.7	6.6	0.0	chr1	231466094	231466164	(17490258)	C	L1MC4a	LINE/L1	(43)	7839	7764	343535
544	21.6	9.0	0.6	chr1	231466175	231466188	(17490234)	C	L1MEg	LINE/L1	(4833)	2204	2191	343536
30	0.0	0.0	0.0	chr1	231466189	231466214	(17490208)	+	(CT)n	Simple_repeat	1	26	(0)	343537
544	22.8	8.0	0.6	chr1	231466215	231466401	(17490021)	C	L1MEg	LINE/L1	(4847)	2190	1972	343536
33	9.1	0.0	2.0	chr1	231586189	231586238	(17370184)	+	(GA)n	Simple_repeat	1	50	(0)	343762
50	18.1	4.2	0.0	chr1	231623861	231623978	(17332444)	+	GA-rich	Low_complexity	1	123	(0)	343826
631	18.9	0.3	0.0	chr1	231623980	231624109	(17332313)	C	MLT2C1	LTR/ERVL	(20)	540	409	343827
18	8.5	0.0	0.0	chr1	231624114	231624138	(17332284)	+	(TC)n	Simple_repeat	1	25	(0)	343828
860	18.7	2.9	1.2	chr1	231624166	231624333	(17332089)	C	AluJb	SINE/Alu	(37)	275	105	343829
501	22.2	0.0	0.0	chr1	231714446	231714553	(17241869)	+	L1MB4	LINE/L1	6153	6260	(641)	343957
105	18.2	1.9	0.5	chr1	231714555	231714767	(17241655)	+	GA-rich	Low_complexity	1	217	(0)	343959
282	31.2	7.4	0.0	chr1	231756323	231756460	(17199962)	+	L2a	LINE/L2	3278	3426	(0)	344018
56	0.0	0.0	0.0	chr1	231756517	231756564	(17199858)	+	(GA)n	Simple_repeat	1	48	(0)	344020
335	30.3	4.3	1.6	chr1	231756670	231756806	(17199616)	+	MIR3	SINE/MIR	35	169	(39)	344021
1412	20.3	7.8	17.1	chr1	231787221	231787660	(17168762)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	344068
2217	20.0	7.8	3.8	chr1	232166762	232167196	(16789226)	C	MER74A	LTR/ERVL	(0)	558	100	344604
34	0.0	0.0	0.0	chr1	232167197	232167225	(16789197)	+	(TC)n	Simple_repeat	1	29	(0)	344605
2217	20.0	7.8	3.8	chr1	232167226	232167320	(16789102)	C	MER74A	LTR/ERVL	(459)	99	5	344604
43	4.5	0.0	0.0	chr1	232271500	232271545	(16684877)	+	(TC)n	Simple_repeat	1	46	(0)	344742
863	27.4	7.6	3.8	chr1	232271546	232271997	(16684425)	C	L1MEi	LINE/L1	(884)	1328	858	344743
48	0.0	0.0	0.0	chr1	232320241	232320281	(16636141)	+	(AG)n	Simple_repeat	1	41	(0)	344818
23	22.6	3.9	2.5	chr1	232368904	232368981	(16587441)	+	(TTCCTC)n	Simple_repeat	1	81	(0)	344882
219	28.1	1.2	6.8	chr1	232678555	232678642	(16277780)	+	MIR	SINE/MIR	88	170	(92)	345246
1503	28.2	2.8	1.0	chr1	232952858	232953272	(16003150)	+	LTR16C	LTR/ERVL	67	489	(0)	345704
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
20	14.4	0.0	0.0	chr1	233295983	233296014	(15660408)	+	(T)n	Simple_repeat	1	32	(0)	346167
1533	26.0	7.4	3.2	chr1	233635662	233636668	(15319754)	C	L2a	LINE/L2	(0)	3426	2378	346694
2563	26.5	13.3	8.3	chr1	233653878	233655516	(15300906)	+	MLT1A0-int	LTR/ERVL-MaLR	2	1735	(0)	346719
509	24.8	2.4	1.6	chr1	233656149	233656271	(15300151)	C	LTR51	LTR/ERV1	(0)	671	548	346720
1960	17.5	2.0	0.9	chr1	233656239	233656583	(15299839)	C	MER65C	LTR/ERV1	(112)	349	1	346721
59	3.5	0.0	0.0	chr1	233904440	233904498	(15051924)	+	(AG)n	Simple_repeat	1	59	(0)	347066
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
12	11.6	3.3	3.2	chr1	233904670	233904699	(15051723)	+	(CGACC)n	Simple_repeat	1	31	(0)	347068
1751	10.8	10.8	0.0	chr1	233918514	233918762	(15037660)	+	AluSq2	SINE/Alu	1	279	(34)	347091
54	3.8	0.0	0.0	chr1	233918763	233918817	(15037605)	+	(TC)n	Simple_repeat	1	55	(0)	347092
16	0.0	0.0	0.0	chr1	233918818	233918835	(15037587)	+	(AT)n	Simple_repeat	1	18	(0)	347093
17	4.9	0.0	0.0	chr1	233918837	233918857	(15037565)	+	(TG)n	Simple_repeat	1	21	(0)	347094
51	8.6	1.3	0.0	chr1	233948181	233948256	(15008166)	+	(AGAG)n	Simple_repeat	1	77	(0)	347144
430	26.5	0.0	8.1	chr1	234049245	234049339	(14907083)	+	MLT1B	LTR/ERVL-MaLR	95	180	(194)	347288
33	4.3	6.2	0.0	chr1	234049340	234049387	(14907035)	+	(CT)n	Simple_repeat	1	51	(0)	347290
891	21.2	3.9	0.4	chr1	234049388	234049602	(14906820)	+	MLT1B	LTR/ERVL-MaLR	181	395	(13)	347288
74	16.6	0.0	0.0	chr1	234066699	234066829	(14889593)	+	(CTCT)n	Simple_repeat	1	131	(0)	347303
120	26.9	3.0	1.0	chr1	234164078	234164449	(14791973)	+	(CTCT)n	Simple_repeat	1	383	(0)	347460
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
38	0.0	0.0	0.0	chr1	234491193	234491225	(14465197)	+	(AC)n	Simple_repeat	1	33	(0)	347951
23	12.6	0.0	0.0	chr1	234491226	234491260	(14465162)	+	(GA)n	Simple_repeat	1	35	(0)	347952
19	0.0	0.0	0.0	chr1	234523923	234523943	(14432479)	+	(TG)n	Simple_repeat	1	21	(0)	348028
12	19.3	0.0	5.1	chr1	234600126	234600164	(14356258)	+	G-rich	Low_complexity	1	39	(0)	348157
37	15.3	0.0	1.4	chr1	234600189	234600258	(14356164)	+	(GCCCC)n	Simple_repeat	1	70	(0)	348158
14	16.2	1.8	8.6	chr1	234608656	234608712	(14347710)	+	(GCGGCC)n	Simple_repeat	1	58	(0)	348163
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
15	27.6	0.0	0.0	chr1	234611146	234611184	(14345238)	+	GA-rich	Low_complexity	1	39	(0)	348169
30	0.0	0.0	0.0	chr1	234623850	234623875	(14332547)	+	(TC)n	Simple_repeat	1	26	(0)	348183
42	0.0	0.0	0.0	chr1	234623889	234623924	(14332498)	+	(CA)n	Simple_repeat	1	36	(0)	348184
237	19.8	6.9	2.4	chr1	234640869	234640951	(14315471)	C	Tigger15a	DNA/TcMar-Tigger	(114)	601	515	348212
44	20.1	1.1	0.0	chr1	234641043	234641133	(14315289)	+	GA-rich	Low_complexity	1	92	(0)	348213
644	25.6	7.2	5.9	chr1	234641136	234641422	(14315000)	C	Tigger15a	DNA/TcMar-Tigger	(290)	425	135	348212
50	27.5	0.0	3.7	chr1	234665151	234665313	(14291109)	+	(CT)n	Simple_repeat	1	163	(0)	348249
510	26.6	16.9	0.5	chr1	234665380	234665572	(14290850)	C	MIR	SINE/MIR	(29)	233	3	348250
12	14.4	0.0	0.0	chr1	234724911	234724934	(14231488)	+	(GAGG)n	Simple_repeat	1	24	(0)	348336
2494	8.2	0.0	0.0	chr1	234737617	234737920	(14218502)	+	AluSg	SINE/Alu	1	304	(6)	348353
30	7.9	5.6	0.0	chr1	234738030	234738083	(14218339)	+	(GAGAGAG)n	Simple_repeat	1	57	(0)	348354
27	15.5	3.9	3.8	chr1	234738084	234738097	(14218325)	+	GA-rich	Low_complexity	28	80	(0)	348355
16	5.3	0.0	0.0	chr1	234746083	234746102	(14210320)	+	(AG)n	Simple_repeat	1	20	(0)	348372
912	16.8	0.0	12.4	chr1	234770886	234771103	(14185319)	+	MER53	DNA/hAT	2	192	(1)	348415
323	27.0	19.7	0.0	chr1	234876693	234876851	(14079571)	+	MIRb	SINE/MIR	3	200	(68)	348586
19	15.5	2.8	0.0	chr1	234962246	234962281	(13994141)	+	GA-rich	Low_complexity	1	37	(0)	348743
1047	20.9	4.8	6.7	chr1	235094173	235094479	(13861943)	C	MLT2D	LTR/ERVL	(0)	414	112	349017
961	20.1	0.0	1.9	chr1	235094480	235094638	(13861784)	C	FRAM	SINE/Alu	(20)	156	1	349018
1047	20.9	4.8	6.7	chr1	235094639	235094673	(13861749)	C	MLT2D	LTR/ERVL	(303)	111	79	349017
2239	7.7	0.0	5.4	chr1	235125743	235126055	(13830367)	C	AluSx3	SINE/Alu	(15)	296	1	349079
1016	24.2	0.5	0.0	chr1	235277053	235277250	(13679172)	+	AluJr	SINE/Alu	89	287	(25)	349380
2212	6.6	1.1	0.0	chr1	235277281	235277551	(13678871)	+	AluSx	SINE/Alu	24	297	(15)	349381
1750	19.8	0.3	2.2	chr1	235307162	235307479	(13648943)	+	AluJr	SINE/Alu	1	312	(0)	349458
15	17.6	0.0	0.0	chr1	235307557	235307583	(13648839)	+	GA-rich	Low_complexity	1	27	(0)	349459
2494	7.8	0.0	0.0	chr1	235428043	235428348	(13528074)	+	AluY	SINE/Alu	1	306	(5)	349735
3183	13.8	7.4	4.1	chr1	235428349	235428542	(13527880)	+	LTR9	LTR/ERV1	422	609	(3)	349733
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
42	0.0	0.0	0.0	chr1	235521414	235521449	(13434973)	+	(AG)n	Simple_repeat	1	36	(0)	349918
576	25.0	3.3	4.9	chr1	235521450	235521668	(13434754)	C	L1ME3Cz	LINE/L1	(298)	699	486	349917
3189	17.8	3.9	0.8	chr1	235919531	235920171	(13036251)	C	L1MB5	LINE/L1	(0)	6174	5513	350633
27	23.7	5.3	2.0	chr1	235920172	235920197	(13036225)	+	(TC)n	Simple_repeat	1	27	(0)	350634
15	4.8	0.0	0.0	chr1	236065014	236065035	(12891387)	+	(CAG)n	Simple_repeat	1	22	(0)	350913
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
41	0.0	0.0	0.0	chr1	236164887	236164921	(12791501)	+	(AG)n	Simple_repeat	1	35	(0)	351122
2036	11.7	0.0	0.0	chr1	236164924	236165204	(12791218)	C	AluSq2	SINE/Alu	(32)	281	1	351123
1339	25.4	5.4	7.3	chr1	236250836	236251437	(12704985)	+	L1ME3Cz	LINE/L1	299	888	(109)	351246
16	14.3	0.0	6.8	chr1	236281579	236281622	(12674800)	+	(GGCCC)n	Simple_repeat	1	44	(0)	351303
481	25.4	16.8	1.0	chr1	236318413	236318607	(12637815)	C	MIR	SINE/MIR	(12)	250	19	351380
542	32.2	7.8	4.3	chr1	236318638	236318732	(12637690)	C	MLT1O	LTR/ERVL-MaLR	(78)	464	362	351381
281	29.4	14.2	5.2	chr1	236397550	236397721	(12558701)	+	L3	LINE/CR1	3735	3924	(175)	351542
28	17.5	0.0	1.7	chr1	236466376	236466435	(12489987)	+	(TCTCTC)n	Simple_repeat	1	60	(0)	351688
29	6.2	0.0	0.0	chr1	236466441	236466474	(12489948)	+	(AC)n	Simple_repeat	1	34	(0)	351689
619	20.2	3.5	13.8	chr1	236472324	236472518	(12483904)	+	MER5B	DNA/hAT-Charlie	5	178	(0)	351707
830	11.1	0.0	0.0	chr1	236472534	236472641	(12483781)	C	AluSx3	SINE/Alu	(17)	294	187	351708
535	23.0	8.4	1.9	chr1	236472688	236472842	(12483580)	C	MIRb	SINE/MIR	(17)	251	86	351709
33	2.6	2.4	2.4	chr1	236635820	236635860	(12320562)	+	(TC)n	Simple_repeat	1	42	(0)	351992
38	2.4	2.2	2.2	chr1	236963752	236963796	(11992626)	+	(CT)n	Simple_repeat	1	46	(0)	352543
419	25.2	7.9	4.1	chr1	236963797	236964015	(11992407)	+	L1MEi	LINE/L1	621	848	(1364)	352544
441	34.2	4.2	3.8	chr1	237012279	237012515	(11943907)	C	MIRb	SINE/MIR	(11)	257	20	352638
19	10.8	3.2	0.0	chr1	237012575	237012605	(11943817)	+	(CT)n	Simple_repeat	1	32	(0)	352639
2622	20.2	5.0	5.1	chr1	237470692	237471420	(11485002)	C	LTR9A1	LTR/ERV1	(0)	728	1	353369
2353	9.5	0.7	0.0	chr1	238016898	238017203	(10939219)	+	AluSx	SINE/Alu	1	308	(4)	354103
30	6.0	0.0	0.0	chr1	238017236	238017270	(10939152)	+	(TC)n	Simple_repeat	1	35	(0)	354104
258	31.5	0.0	0.9	chr1	238017290	238017401	(10939021)	+	L1MC4	LINE/L1	7927	8037	(5)	354105
47	5.9	0.0	0.0	chr1	239322404	239322457	(9633965)	+	(TC)n	Simple_repeat	1	54	(0)	355929
2013	13.5	8.5	1.5	chr1	239382667	239383004	(9573418)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	356027
1560	25.1	12.7	3.4	chr1	239383005	239383051	(9573371)	C	L1MEg	LINE/L1	(4980)	1435	1381	356021
47	2.0	1.9	1.9	chr1	239383055	239383107	(9573315)	+	(TC)n	Simple_repeat	1	54	(0)	356028
44	7.3	0.0	0.0	chr1	239690019	239690076	(9266346)	+	(AG)n	Simple_repeat	1	58	(0)	356520
36	3.4	8.1	1.5	chr1	239912125	239912186	(9044236)	+	(TC)n	Simple_repeat	1	67	(0)	356850
640	15.7	0.0	13.1	chr1	239984438	239984590	(8971832)	+	FLAM_C	SINE/Alu	1	133	(10)	356947
74	20.1	1.1	3.6	chr1	239984591	239984769	(8971653)	+	GA-rich	Low_complexity	13	185	(0)	356948
983	26.4	9.7	8.9	chr1	240000810	240001543	(8954879)	C	Kanga1a	DNA/TcMar-Tc2	(0)	754	14	356971
34	13.2	0.0	0.0	chr1	240001643	240001700	(8954722)	+	(AGAG)n	Simple_repeat	1	58	(0)	356972
16	0.0	0.0	0.0	chr1	240056426	240056443	(8899979)	+	(TG)n	Simple_repeat	1	18	(0)	357065
14	14.6	0.0	3.1	chr1	240091763	240091794	(8864628)	+	(GCG)n	Simple_repeat	1	32	(0)	357135
17	21.6	2.1	0.0	chr1	240091879	240091926	(8864496)	+	(AGCCGC)n	Simple_repeat	1	49	(0)	357136
15	16.7	2.9	0.0	chr1	240092260	240092293	(8864129)	+	(GGC)n	Simple_repeat	1	35	(0)	357137
273	32.7	2.8	1.2	chr1	240147815	240147921	(8808501)	C	MER5A	DNA/hAT-Charlie	(35)	143	44	357230
166	17.6	1.8	2.8	chr1	240148156	240148535	(8807887)	+	(AGAGAC)n	Simple_repeat	1	387	(0)	357231
36	0.0	0.0	0.0	chr1	240425205	240425235	(8531187)	+	(GA)n	Simple_repeat	1	31	(0)	357605
674	30.1	11.4	2.6	chr1	240425236	240425283	(8531139)	C	L2a	LINE/L2	(329)	3097	3048	357604
1820	15.0	4.0	0.4	chr1	240484657	240484922	(8471500)	+	AluJb	SINE/Alu	24	299	(13)	357701
15	0.0	0.0	0.0	chr1	240484923	240484939	(8471483)	+	(GA)n	Simple_repeat	1	17	(0)	357702
526	13.6	0.0	2.5	chr1	240484968	240485048	(8471374)	+	AluJb	SINE/Alu	227	305	(7)	357703
14	20.3	0.0	4.7	chr1	240652854	240652896	(8303526)	+	(TTTC)n	Simple_repeat	1	43	(0)	358020
1085	14.9	1.2	0.0	chr1	240653199	240653366	(8303056)	C	MER58B	DNA/hAT-Charlie	(0)	341	172	358021
456	20.6	1.0	1.9	chr1	240653375	240653478	(8302944)	+	U5	snRNA	14	116	(0)	358022
40	2.6	0.0	0.0	chr1	240683012	240683050	(8273372)	+	(GA)n	Simple_repeat	1	39	(0)	358078
2485	11.5	0.0	0.0	chr1	240683105	240683409	(8273013)	C	AluSx3	SINE/Alu	(6)	305	1	358079
2287	10.6	0.0	3.4	chr1	240783894	240784215	(8172207)	+	AluSq2	SINE/Alu	1	311	(2)	358262
1969	6.2	0.0	5.8	chr1	241088762	241089020	(7867402)	+	AluSc8	SINE/Alu	33	276	(35)	358714
50	0.0	0.0	0.0	chr1	241089022	241089064	(7867358)	+	(TC)n	Simple_repeat	1	43	(0)	358715
1647	21.2	5.0	2.5	chr1	241114046	241114494	(7841928)	+	MER89	LTR/ERV1	1	559	(0)	358761
82	14.7	4.5	3.4	chr1	241235561	241235759	(7720663)	+	(TTCT)n	Simple_repeat	1	208	(0)	358984
2013	21.8	4.6	4.8	chr1	241450003	241450262	(7506160)	C	MLT2B1	LTR/ERVL	(0)	520	263	359303
1923	12.7	1.9	0.8	chr1	241450263	241450530	(7505892)	+	AluSx4	SINE/Alu	1	271	(39)	359304
19	22.5	0.0	8.0	chr1	241531207	241531227	(7425195)	+	A-rich	Low_complexity	1	41	(34)	359418
24	14.4	0.0	0.0	chr1	241531228	241531266	(7425156)	+	(GA)n	Simple_repeat	1	39	(0)	359419
19	22.5	0.0	8.0	chr1	241531267	241531281	(7425141)	+	A-rich	Low_complexity	42	75	(0)	359418
574	24.1	2.9	0.0	chr1	241531323	241531455	(7424967)	+	L1ME4b	LINE/L1	756	892	(0)	359420
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
14	27.3	0.0	0.0	chr1	241640678	241640718	(7315704)	+	(CATT)n	Simple_repeat	1	41	(0)	359587
1657	26.0	5.0	1.8	chr1	241806938	241807560	(7148862)	+	L1ME3B	LINE/L1	5615	6258	(158)	359855
48	7.7	2.2	4.3	chr1	241807564	241807653	(7148769)	+	(GAAA)n	Simple_repeat	1	92	(0)	359864
798	11.2	4.8	8.6	chr1	241829261	241829409	(7127013)	C	L1PA13	LINE/L1	(3)	6160	6020	359906
32	3.2	0.0	0.0	chr1	241829410	241829441	(7126981)	+	(TC)n	Simple_repeat	1	32	(0)	359907
798	11.2	4.8	8.6	chr1	241829442	241829466	(7126956)	C	L1PA13	LINE/L1	(144)	6019	5993	359906
2281	12.9	0.3	0.3	chr1	241988566	241988875	(6967547)	C	AluSx	SINE/Alu	(2)	310	1	360277
1103	22.8	1.4	0.0	chr1	241988946	241989164	(6967258)	C	MER58A	DNA/hAT-Charlie	(0)	224	3	360278
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
2202	19.8	9.3	1.7	chr1	243293832	243294482	(5661940)	C	L1MB4	LINE/L1	(5030)	1678	991	362361
41	4.7	0.0	0.0	chr1	243294483	243294526	(5661896)	+	(GA)n	Simple_repeat	1	44	(0)	362363
1155	18.1	3.6	9.1	chr1	243294527	243294742	(5661680)	C	L1MB4	LINE/L1	(6731)	990	679	362361
34	0.0	0.0	0.0	chr1	243355315	243355343	(5601079)	+	(TC)n	Simple_repeat	1	29	(0)	362456
1224	24.4	10.8	1.8	chr1	243433833	243434271	(5522151)	+	Charlie20a	DNA/hAT-Charlie	170	652	(155)	362590
181	5.5	3.1	1.1	chr1	244156534	244156789	(4799633)	+	(TTTC)n	Simple_repeat	1	264	(0)	363664
41	23.3	2.8	0.9	chr1	244156790	244156835	(4799587)	+	(CTCT)n	Simple_repeat	1	47	(0)	363665
38	14.2	2.1	4.1	chr1	244156836	244156883	(4799539)	+	(CCTT)n	Simple_repeat	1	77	(70)	363666
41	23.3	2.8	0.9	chr1	244156884	244156945	(4799477)	+	(CTCT)n	Simple_repeat	4	67	(0)	363667
38	14.2	2.1	4.1	chr1	244156946	244156986	(4799436)	+	(CCTT)n	Simple_repeat	78	147	(0)	363666
16	13.7	0.0	0.0	chr1	244239509	244239533	(4716889)	+	(GT)n	Simple_repeat	1	25	(0)	363797
27	6.1	0.0	0.0	chr1	244239533	244239567	(4716855)	+	(GA)n	Simple_repeat	1	35	(0)	363798
2294	6.9	0.4	0.0	chr1	244298926	244299202	(4657220)	+	AluSq	SINE/Alu	1	278	(35)	363925
21	4.0	0.0	0.0	chr1	244299210	244299235	(4657187)	+	(GA)n	Simple_repeat	1	26	(0)	363926
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
1793	16.7	7.6	0.0	chr1	244665526	244665854	(4290568)	+	MLT2D	LTR/ERVL	1	356	(58)	364526
1258	27.2	12.4	2.2	chr1	244665908	244666449	(4289973)	+	L2c	LINE/L2	1187	1791	(1628)	364527
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
201	33.0	12.9	0.9	chr1	245018780	245018895	(3937527)	C	MIRb	SINE/MIR	(47)	221	90	365302
86	9.9	0.0	0.0	chr1	245751520	245751640	(3204782)	+	(GA)n	Simple_repeat	1	121	(0)	366483
46	17.9	0.0	0.0	chr1	245785630	245785717	(3170705)	+	GA-rich	Low_complexity	1	88	(0)	366525
1831	15.4	0.7	2.1	chr1	245785720	245786004	(3170418)	C	AluJr4	SINE/Alu	(31)	281	1	366526
1484	22.8	2.2	0.0	chr1	246391105	246391376	(2565046)	+	AluJr4	SINE/Alu	2	279	(33)	367371
70	17.1	2.3	0.0	chr1	246391378	246391508	(2564914)	+	GA-rich	Low_complexity	1	134	(0)	367372
75	0.0	0.0	0.0	chr1	247091457	247091520	(1864902)	+	(AG)n	Simple_repeat	1	64	(0)	368634
1178	7.1	0.0	3.9	chr1	247091521	247091674	(1864748)	C	AluSx	SINE/Alu	(39)	273	126	368635
423	19.7	12.9	1.6	chr10	477696	477819	(133319603)	+	L1MC4	LINE/L1	1095	1234	(4981)	371562
48	0.0	0.0	0.0	chr10	674790	674830	(133122592)	+	(AG)n	Simple_repeat	1	41	(0)	371726
11370	15.5	2.0	1.2	chr10	674831	676741	(133120681)	+	L1MEd	LINE/L1	2523	4462	(1681)	371724
126	25.2	0.0	0.0	chr10	1568994	1569287	(132228135)	+	GA-rich	Low_complexity	1	294	(0)	372712
335	27.8	10.4	3.9	chr10	2883360	2883539	(130913883)	+	MamRep434	DNA/TcMar-Tigger	1	193	(233)	374309
110	37.9	0.9	3.5	chr10	2987142	2987716	(130809706)	+	(TTTC)n	Simple_repeat	1	580	(0)	374461
24	3.6	0.0	0.0	chr10	3001787	3001815	(130795607)	+	(AG)n	Simple_repeat	1	29	(0)	374475
15	10.0	0.0	0.0	chr10	3001853	3001874	(130795548)	+	(GA)n	Simple_repeat	1	22	(0)	374476
92	19.6	1.5	0.5	chr10	3047718	3047914	(130749508)	+	(CTCT)n	Simple_repeat	1	200	(0)	374551
80	30.7	0.7	1.4	chr10	3056558	3056788	(130740634)	+	(TC)n	Simple_repeat	1	230	(0)	374565
31	0.0	0.0	0.0	chr10	3056789	3056815	(130740607)	+	(TG)n	Simple_repeat	1	27	(0)	374566
80	30.7	0.7	1.4	chr10	3056816	3056862	(130740560)	+	(TC)n	Simple_repeat	1	46	(0)	374567
254	29.5	5.4	1.1	chr10	3167163	3167251	(130630171)	C	MIR3	SINE/MIR	(15)	193	101	374697
17	20.1	0.0	0.0	chr10	3167272	3167311	(130630111)	+	GA-rich	Low_complexity	1	40	(0)	374698
1113	22.8	4.0	11.9	chr10	3198325	3198727	(130598695)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	5	374757
329	31.7	9.2	3.9	chr10	3209582	3209919	(130587503)	C	HAL1b	LINE/L1	(1164)	1257	900	374774
29	17.4	3.1	0.0	chr10	3209920	3209984	(130587438)	+	(TCTGTC)n	Simple_repeat	1	67	(0)	374775
69	4.1	1.3	0.0	chr10	3437211	3437286	(130360136)	+	(TC)n	Simple_repeat	1	77	(0)	375102
267	29.6	2.4	0.0	chr10	3437382	3437462	(130359960)	C	LTR107_Mam	LTR	(176)	394	312	375103
100	7.6	0.0	2.0	chr10	3468824	3468970	(130328452)	+	(CTTT)n	Simple_repeat	1	147	(0)	375142
65	6.3	0.0	0.0	chr10	3712859	3712941	(130084481)	+	(AG)n	Simple_repeat	1	83	(0)	375459
98	26.8	3.3	2.0	chr10	3946822	3947155	(129850267)	+	(CTTT)n	Simple_repeat	1	345	(0)	375818
653	26.1	5.0	0.5	chr10	4077250	4077442	(129719980)	+	MER3	DNA/hAT-Charlie	8	209	(0)	376005
282	23.6	0.0	6.5	chr10	4077443	4077474	(129719948)	C	MER3	DNA/hAT-Charlie	(162)	47	21	376006
33	25.5	0.0	0.0	chr10	4077496	4077571	(129719851)	+	GA-rich	Low_complexity	1	76	(0)	376007
2064	16.6	0.3	1.9	chr10	4077736	4078042	(129719380)	+	AluSz	SINE/Alu	1	302	(10)	376008
128	8.3	2.3	3.1	chr10	4078043	4078261	(129719161)	+	(GAAA)n	Simple_repeat	1	224	(0)	376009
369	21.0	2.4	0.0	chr10	4208857	4208937	(129588485)	+	L1MEg	LINE/L1	1328	1410	(5923)	376202
20	19.1	0.0	3.8	chr10	4208944	4208996	(129588426)	+	A-rich	Low_complexity	1	53	(0)	376203
57	3.5	0.0	0.0	chr10	4208999	4209056	(129588366)	+	(AG)n	Simple_repeat	1	58	(0)	376204
27	18.4	0.0	1.9	chr10	4766597	4766649	(129030773)	+	(TC)n	Simple_repeat	1	53	(0)	376906
44	0.0	0.0	0.0	chr10	5554771	5554808	(128242614)	+	(AC)n	Simple_repeat	1	38	(0)	377917
20	13.7	0.0	0.0	chr10	5554809	5554840	(128242582)	+	(TC)n	Simple_repeat	1	32	(0)	377918
33	0.0	0.0	0.0	chr10	5554942	5554969	(128242453)	+	(GT)n	Simple_repeat	1	28	(0)	377919
60	23.8	0.7	1.9	chr10	5560184	5560337	(128237085)	+	(TC)n	Simple_repeat	1	155	(0)	377923
11	16.7	5.9	0.0	chr10	5576130	5576163	(128221259)	+	(GGCCCA)n	Simple_repeat	1	36	(0)	377945
28	3.3	0.0	0.0	chr10	5576233	5576263	(128221159)	+	(CTCC)n	Simple_repeat	1	31	(0)	377946
51	21.6	0.0	0.0	chr10	5576269	5576380	(128221042)	+	(CTCTCT)n	Simple_repeat	1	112	(0)	377947
270	21.0	3.9	4.3	chr10	5576382	5576615	(128220807)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	779	377948
51	16.0	2.1	0.0	chr10	6404195	6404287	(127393135)	+	GA-rich	Low_complexity	1	95	(0)	379455
259	17.8	1.1	2.5	chr10	6404368	6404903	(127392519)	+	(TTCT)n	Simple_repeat	1	528	(0)	379456
278	6.8	2.2	5.7	chr10	6467293	6467432	(127329990)	+	HERV17-int	LTR/ERV1	699	833	(7793)	379557
25	8.4	2.6	0.0	chr10	6793615	6793652	(127003770)	+	(CT)n	Simple_repeat	1	39	(0)	380085
83	4.7	1.8	0.9	chr10	6915436	6915546	(126881876)	+	(GA)n	Simple_repeat	1	113	(0)	380260
49	2.0	1.9	1.8	chr10	7135956	7136009	(126661413)	+	(TC)n	Simple_repeat	1	55	(0)	380598
73	0.0	0.0	1.4	chr10	7228673	7228741	(126568681)	+	(TTCT)n	Simple_repeat	1	69	(0)	380697
51	6.5	0.0	0.0	chr10	7228742	7228807	(126568615)	+	(CT)n	Simple_repeat	1	66	(0)	380698
38	8.5	0.0	0.0	chr10	7293692	7293742	(126503680)	+	(CT)n	Simple_repeat	1	51	(0)	380789
230	34.1	1.2	1.2	chr10	7293744	7293829	(126503593)	C	MLT1J2	LTR/ERVL-MaLR	(94)	354	269	380790
13	19.6	0.0	0.0	chr10	7302845	7302874	(126494548)	+	(CTCT)n	Simple_repeat	1	30	(0)	380801
23	15.3	0.0	0.0	chr10	7303492	7303535	(126493887)	+	GA-rich	Low_complexity	1	44	(0)	380802
2019	12.8	0.0	0.0	chr10	7314626	7314898	(126482524)	+	AluSx1	SINE/Alu	1	273	(39)	380822
132	9.1	5.3	0.4	chr10	7314899	7315126	(126482296)	+	(AAGA)n	Simple_repeat	1	240	(0)	380823
30	14.4	5.6	1.3	chr10	7410927	7411024	(126386398)	+	(CTCG)n	Simple_repeat	1	102	(0)	380967
412	28.7	3.5	2.5	chr10	7432921	7433120	(126364302)	+	MER127	DNA/TcMar-Tigger	109	310	(54)	380999
552	30.5	10.5	6.1	chr10	7478273	7478799	(126318623)	C	L1ME4a	LINE/L1	(292)	5832	5280	381091
32	10.8	0.0	0.0	chr10	7478802	7478851	(126318571)	+	(CT)n	Simple_repeat	1	50	(0)	381092
705	21.4	0.0	0.0	chr10	7478875	7478991	(126318431)	C	FLAM_A	SINE/Alu	(13)	129	13	381093
259	27.0	0.0	1.6	chr10	7478944	7479007	(126318415)	+	SVA_B	Retroposon/SVA	133	195	(1188)	381094
926	22.4	5.4	6.6	chr10	7676301	7676754	(126120668)	+	MLT1A	LTR/ERVL-MaLR	1	410	(22)	381411
38	0.0	0.0	0.0	chr10	7957795	7957827	(125839595)	+	(CT)n	Simple_repeat	1	33	(0)	381897
12	32.0	0.0	0.0	chr10	8049722	8049771	(125747651)	+	(GGCGGA)n	Simple_repeat	1	50	(0)	382054
32	12.5	3.3	0.0	chr10	8054764	8054824	(125742598)	+	GA-rich	Low_complexity	1	63	(0)	382058
22	0.0	0.0	0.0	chr10	8061067	8061090	(125736332)	+	(CT)n	Simple_repeat	1	24	(0)	382063
17	0.0	0.0	0.0	chr10	8151907	8151925	(125645497)	+	(CA)n	Simple_repeat	1	19	(0)	382228
22	9.2	0.0	0.0	chr10	8151925	8151959	(125645463)	+	(CTCT)n	Simple_repeat	1	35	(0)	382229
15	15.7	2.1	6.1	chr10	8152103	8152150	(125645272)	+	A-rich	Low_complexity	1	49	(0)	382230
2363	11.9	1.0	0.3	chr10	8272281	8272583	(125524839)	C	AluSz	SINE/Alu	(7)	305	1	382456
53	3.0	2.7	2.7	chr10	8500079	8500151	(125297271)	+	(TTCT)n	Simple_repeat	1	75	(0)	382876
15	18.3	0.0	2.4	chr10	8500152	8500178	(125297244)	+	(CTCC)n	Simple_repeat	2	27	(0)	382877
261	33.5	1.7	4.9	chr10	8500179	8500423	(125296999)	+	L2b	LINE/L2	3183	3419	(7)	382878
376	30.2	0.8	4.8	chr10	8534079	8534203	(125263219)	C	MER131	DNA?	(95)	120	1	382937
70	1.6	0.0	0.0	chr10	8561959	8562022	(125235400)	+	(GA)n	Simple_repeat	1	64	(0)	382978
70	20.6	1.1	3.4	chr10	9215230	9215404	(124582018)	+	(CTTT)n	Simple_repeat	1	177	(0)	383946
2854	17.5	2.1	6.0	chr10	9620719	9621201	(124176221)	+	LTR9	LTR/ERV1	1	465	(147)	384513
57	1.9	0.0	0.0	chr10	9621202	9621254	(124176168)	+	(CT)n	Simple_repeat	1	53	(0)	384514
182	14.8	3.0	1.8	chr10	10483842	10483876	(123313546)	+	(CCTC)n	Simple_repeat	1	33	(0)	385701
59	4.8	0.0	7.0	chr10	10483877	10483976	(123313446)	+	(TC)n	Simple_repeat	1	100	(0)	385702
182	14.8	3.0	1.8	chr10	10483977	10484310	(123313112)	+	(CCTC)n	Simple_repeat	2	342	(0)	385703
378	25.2	14.8	3.2	chr10	10989799	10990048	(122807374)	+	L1ME4a	LINE/L1	5315	5598	(526)	386402
52	7.1	2.7	0.0	chr10	11005230	11005303	(122792119)	+	(AG)n	Simple_repeat	1	76	(0)	386424
60	0.0	0.0	0.0	chr10	11202902	11202952	(122594470)	+	(TC)n	Simple_repeat	1	51	(0)	386604
18	0.0	0.0	0.0	chr10	11202953	11202972	(122594450)	+	(GT)n	Simple_repeat	1	20	(0)	386605
46	2.2	2.1	0.0	chr10	11555452	11555498	(122241924)	+	(AG)n	Simple_repeat	1	48	(0)	387060
2285	25.1	10.4	1.7	chr10	11555499	11556828	(122240594)	+	L1MEg	LINE/L1	1270	2725	(3594)	387055
2049	13.8	0.0	0.7	chr10	11609076	11609366	(122188056)	C	AluSz	SINE/Alu	(23)	289	1	387151
1209	20.7	6.0	10.9	chr10	11686134	11686358	(122111064)	C	L1MA10	LINE/L1	(0)	6334	6148	387326
1823	16.2	3.4	8.6	chr10	11692669	11692892	(122104530)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	177	387336
1980	17.3	0.0	1.0	chr10	11692893	11693204	(122104218)	C	AluJo	SINE/Alu	(2)	310	2	387337
1627	22.4	3.2	14.8	chr10	12562973	12563601	(121233821)	C	MLT2B3	LTR/ERVL	(0)	554	1	389167
55	3.7	0.0	0.0	chr10	12563665	12563720	(121233702)	+	(GA)n	Simple_repeat	1	56	(0)	389168
1397	27.7	12.6	3.3	chr10	12720095	12720888	(121076534)	C	MamGypsy2-I	LTR/Gypsy	(206)	3960	3082	389453
33	31.1	0.7	3.6	chr10	13080155	13080293	(120717129)	+	GA-rich	Low_complexity	1	140	(0)	390066
14	7.6	7.1	0.0	chr10	13099324	13099351	(120698071)	+	(GTT)n	Simple_repeat	1	30	(0)	390107
62	10.8	1.9	0.9	chr10	13099351	13099454	(120697968)	+	(TCCC)n	Simple_repeat	1	106	(0)	390108
501	29.5	9.6	1.7	chr10	13631358	13631588	(120165834)	+	MIR	SINE/MIR	11	261	(1)	391113
17	0.0	0.0	0.0	chr10	13802004	13802022	(119995400)	+	(A)n	Simple_repeat	1	19	(0)	391380
41	0.0	0.0	0.0	chr10	13902457	13902491	(119894931)	+	(GA)n	Simple_repeat	1	35	(0)	391578
345	29.0	3.1	15.3	chr10	13902510	13902557	(119894865)	C	MER5A	DNA/hAT-Charlie	(16)	173	135	391579
2281	11.6	0.3	0.3	chr10	13902558	13902867	(119894555)	+	AluSz	SINE/Alu	1	310	(2)	391580
1451	14.9	4.7	21.3	chr10	13920985	13921264	(119876158)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	153	391618
1814	18.0	1.3	0.0	chr10	13921265	13921558	(119875864)	C	AluJb	SINE/Alu	(12)	300	3	391619
34	16.7	6.0	1.1	chr10	14174239	14174321	(119623101)	+	(CT)n	Simple_repeat	1	88	(0)	392027
37	13.2	1.5	0.0	chr10	14247495	14247560	(119549862)	+	(CTCT)n	Simple_repeat	1	67	(0)	392159
1329	30.2	6.5	2.1	chr10	14318776	14319337	(119478085)	+	MLT1G	LTR/ERVL-MaLR	1	588	(3)	392263
30	0.0	3.5	0.0	chr10	14319340	14319368	(119478054)	+	(TC)n	Simple_repeat	1	30	(0)	392264
17	0.0	0.0	0.0	chr10	14319369	14319387	(119478035)	+	(AC)n	Simple_repeat	1	19	(0)	392265
83	28.9	1.2	0.8	chr10	14604707	14604958	(119192464)	+	(CT)n	Simple_repeat	1	255	(0)	392731
40	0.0	0.0	0.0	chr10	14737767	14737800	(119059622)	+	(TC)n	Simple_repeat	1	34	(0)	392982
72	1.5	0.0	0.0	chr10	14767056	14767121	(119030301)	+	(AG)n	Simple_repeat	1	66	(0)	393029
1991	10.7	1.1	0.0	chr10	14767122	14767391	(119030031)	C	AluSx1	SINE/Alu	(39)	273	1	393030
30	3.4	0.0	0.0	chr10	15089085	15089114	(118708308)	+	(GA)n	Simple_repeat	1	30	(0)	393600
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
3449	8.9	2.6	2.0	chr10	15409296	15409798	(118387624)	+	L1PB	LINE/L1	4788	5293	(853)	394211
1407	23.5	11.1	6.9	chr10	15431312	15431600	(118365822)	C	L1MC5	LINE/L1	(239)	9065	8791	394247
3556	11.9	0.9	4.2	chr10	15431601	15431975	(118365447)	+	MER1A	DNA/hAT-Charlie	3	376	(153)	394249
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
48	0.0	0.0	0.0	chr10	15434587	15434627	(118362795)	+	(CA)n	Simple_repeat	1	41	(0)	394254
24	12.6	0.0	4.2	chr10	15505724	15505736	(118291686)	+	(CA)n	Simple_repeat	1	12	(0)	394384
32	3.2	0.0	0.0	chr10	15505737	15505768	(118291654)	+	(TC)n	Simple_repeat	1	32	(0)	394385
24	12.6	0.0	4.2	chr10	15505769	15505802	(118291620)	+	(CA)n	Simple_repeat	1	33	(0)	394386
1042	30.3	1.1	0.8	chr10	15704590	15704942	(118092480)	C	MamGypsy2-I	LTR/Gypsy	(3812)	354	1	394685
205	31.6	14.8	4.4	chr10	15796258	15796462	(118000960)	+	MIRb	SINE/MIR	35	264	(4)	394821
234	34.4	7.6	3.9	chr10	15815158	15815284	(117982138)	C	Tigger19b	DNA/TcMar-Tigger	(186)	364	233	394842
1347	32.3	3.4	0.8	chr10	15856844	15857383	(117940039)	+	L2a	LINE/L2	2650	3205	(221)	394901
1638	27.8	8.3	6.0	chr10	16102830	16103540	(117693882)	C	L1MEf	LINE/L1	(4928)	2622	2017	395261
568	32.4	8.5	4.0	chr10	16103581	16103630	(117693792)	C	L1MEf	LINE/L1	(5942)	510	454	395261
45	2.4	0.0	0.0	chr10	16103631	16103673	(117693749)	+	(TC)n	Simple_repeat	1	43	(0)	395263
568	32.4	8.5	4.0	chr10	16103674	16104072	(117693350)	C	L1MEf	LINE/L1	(5999)	453	40	395261
52	15.4	0.0	4.5	chr10	17127149	17127260	(116670162)	+	(TTCT)n	Simple_repeat	1	112	(0)	396849
1825	15.3	0.0	3.1	chr10	17127261	17127554	(116669868)	C	AluJo	SINE/Alu	(7)	305	21	396850
353	31.5	0.0	0.0	chr10	17134820	17134908	(116662514)	C	Tigger20a	DNA/TcMar-Tigger	(879)	94	6	396858
35	0.0	0.0	0.0	chr10	17134963	17134992	(116662430)	+	(GA)n	Simple_repeat	1	30	(0)	396861
706	33.6	8.2	7.4	chr10	17212634	17213334	(116584088)	+	LTR78	LTR/ERV1	479	1185	(119)	396977
1735	15.0	1.9	2.6	chr10	17321819	17322085	(116475337)	+	AluJr	SINE/Alu	1	265	(47)	397171
39	2.7	0.0	0.0	chr10	17322087	17322124	(116475298)	+	(AG)n	Simple_repeat	1	38	(0)	397172
57	25.5	4.4	1.1	chr10	17322125	17322306	(116475116)	+	GA-rich	Low_complexity	1	190	(0)	397173
2008	25.3	4.6	4.3	chr10	18155047	18155806	(115641616)	C	L1ME3A	LINE/L1	(8)	6165	5404	398607
32	8.8	2.1	0.0	chr10	18155844	18155891	(115641531)	+	(AG)n	Simple_repeat	1	49	(0)	398608
30	15.4	2.8	4.1	chr10	18155894	18155964	(115641458)	+	(AT)n	Simple_repeat	1	73	(0)	398609
32	9.8	0.0	0.0	chr10	18220189	18220233	(115577189)	+	(AT)n	Simple_repeat	1	45	(0)	398716
39	0.0	0.0	0.0	chr10	18220233	18220275	(115577147)	+	(AG)n	Simple_repeat	1	43	(0)	398717
1788	15.8	2.1	2.8	chr10	18220278	18220561	(115576861)	C	AluSx1	SINE/Alu	(30)	282	1	398718
1984	14.8	0.0	0.3	chr10	18358105	18358387	(115439035)	C	AluSz	SINE/Alu	(30)	282	1	398956
336	31.1	6.2	0.0	chr10	18358389	18358494	(115438928)	C	L2a	LINE/L2	(0)	3426	3314	398957
82	1.4	0.0	0.0	chr10	18358498	18358571	(115438851)	+	(CT)n	Simple_repeat	1	74	(0)	398958
1714	13.1	17.8	5.6	chr10	18479517	18479889	(115317533)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	399186
1824	19.2	1.3	0.0	chr10	21370967	21371273	(112426149)	+	AluJo	SINE/Alu	2	312	(0)	403532
16	0.0	0.0	0.0	chr10	21371274	21371291	(112426131)	+	(AG)n	Simple_repeat	1	18	(0)	403533
81	14.4	1.5	5.6	chr10	21371290	21371461	(112425961)	+	GA-rich	Low_complexity	1	164	(0)	403534
2394	7.8	0.0	0.7	chr10	21371462	21371756	(112425666)	+	AluSg7	SINE/Alu	2	294	(15)	403535
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
16	24.8	2.1	0.0	chr10	21510439	21510486	(112286936)	+	G-rich	Low_complexity	1	49	(0)	403851
33	0.0	0.0	0.0	chr10	21510754	21510784	(112286638)	+	(T)n	Simple_repeat	1	31	(0)	403852
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
46	0.0	0.0	0.0	chr10	21786464	21786502	(112010920)	+	(AG)n	Simple_repeat	1	39	(0)	404329
1834	10.6	5.5	1.9	chr10	21786504	21786768	(112010654)	C	AluSx	SINE/Alu	(35)	277	3	404330
41	29.6	0.8	0.0	chr10	21813054	21813150	(111984272)	+	(AT)n	Simple_repeat	1	98	(0)	404370
78	1.4	0.0	0.0	chr10	21813151	21813221	(111984201)	+	(TC)n	Simple_repeat	1	71	(0)	404371
41	29.6	0.8	0.0	chr10	21813222	21813250	(111984172)	+	(AT)n	Simple_repeat	1	29	(0)	404372
445	19.3	0.0	1.1	chr10	21813253	21813341	(111984081)	+	MLT1F	LTR/ERVL-MaLR	167	254	(294)	404368
2363	7.8	3.0	0.7	chr10	21813392	21813687	(111983735)	C	AluYb8	SINE/Alu	(15)	303	1	404373
2254	27.5	8.2	2.8	chr10	22279510	22280717	(111516705)	+	L2a	LINE/L2	2153	3426	(0)	405042
975	12.0	0.0	0.0	chr10	22286584	22286708	(111510714)	+	AluJr	SINE/Alu	1	125	(187)	405057
1102	11.5	0.6	1.1	chr10	22286721	22286896	(111510526)	+	LTR9	LTR/ERV1	438	612	(0)	405058
2364	15.9	2.2	4.4	chr10	22286899	22287275	(111510147)	+	HUERS-P3-int	LTR/ERV1	2	365	(8554)	405058
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
14	11.7	2.3	6.8	chr10	22340648	22340690	(111456732)	+	G-rich	Low_complexity	1	44	(0)	405128
34	0.0	0.0	2.9	chr10	22463384	22463417	(111334005)	+	(AG)n	Simple_repeat	1	34	(0)	405307
26	6.4	8.2	0.0	chr10	22463485	22463533	(111333889)	+	(AAAC)n	Simple_repeat	1	53	(0)	405308
49	7.4	2.8	0.0	chr10	22539876	22539946	(111257476)	+	(AG)n	Simple_repeat	1	73	(0)	405420
2280	11.6	1.3	0.0	chr10	22928946	22929248	(110868174)	+	AluSx1	SINE/Alu	2	308	(4)	406003
32	25.1	2.4	4.7	chr10	22929249	22929357	(110868065)	+	A-rich	Low_complexity	14	122	(0)	406004
234	19.2	9.9	0.0	chr10	22929382	22929454	(110867968)	+	L1ME4a	LINE/L1	6031	6111	(13)	406001
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
46	4.3	0.0	0.0	chr10	23189155	23189202	(110608220)	+	(CT)n	Simple_repeat	1	48	(0)	406420
1956	26.5	13.5	5.0	chr10	23212368	23212778	(110584644)	+	L1ME3C	LINE/L1	183	625	(1587)	406445
54	0.0	0.0	0.0	chr10	23212779	23212824	(110584598)	+	(GA)n	Simple_repeat	1	46	(0)	406447
1956	25.1	17.5	4.9	chr10	23212825	23213647	(110583775)	+	L1ME3C	LINE/L1	626	1640	(5463)	406445
48	23.9	4.2	4.7	chr10	23344117	23344368	(110453054)	+	G-rich	Low_complexity	1	250	(0)	406652
1855	18.0	0.0	2.0	chr10	23421293	23421580	(110375842)	+	AluJb	SINE/Alu	1	286	(26)	406856
42	4.6	0.0	0.0	chr10	23421581	23421625	(110375797)	+	(AG)n	Simple_repeat	1	45	(0)	406857
1855	18.0	0.0	2.0	chr10	23421626	23421642	(110375780)	+	AluJb	SINE/Alu	287	300	(12)	406856
37	16.5	0.0	0.0	chr10	23428289	23428351	(110369071)	+	(CT)n	Simple_repeat	1	63	(0)	406873
61	0.0	0.0	0.0	chr10	23982530	23982581	(109814841)	+	(TC)n	Simple_repeat	1	52	(0)	407764
2005	13.4	0.0	0.3	chr10	23982582	23982863	(109814559)	C	AluSx	SINE/Alu	(30)	282	2	407765
69	8.5	1.0	1.0	chr10	24264766	24264868	(109532554)	+	(TC)n	Simple_repeat	1	104	(0)	408220
47	4.2	0.0	0.0	chr10	24770325	24770373	(109027049)	+	(GA)n	Simple_repeat	1	49	(0)	409079
60	30.0	1.7	3.9	chr10	24866779	24867060	(108930362)	+	GA-rich	Low_complexity	1	275	(0)	409287
35	8.5	0.0	0.0	chr10	24893257	24893307	(108904115)	+	(TCTC)n	Simple_repeat	1	51	(0)	409345
1613	16.9	1.1	7.4	chr10	24893311	24893606	(108903816)	C	AluJo	SINE/Alu	(34)	278	2	409346
45	2.3	0.0	0.0	chr10	24952656	24952700	(108844722)	+	(GGGGAC)n	Simple_repeat	1	45	(0)	409451
16	24.9	0.0	6.2	chr10	24952859	24952922	(108844500)	+	(GCC)n	Simple_repeat	1	64	(0)	409452
50	7.0	8.5	0.0	chr10	24978409	24978514	(108818908)	+	(TC)n	Simple_repeat	1	115	(0)	409493
19206	13.2	3.3	2.3	chr10	26040677	26043149	(107754273)	C	L1M1	LINE/L1	(3280)	4285	1757	411068
43	0.0	0.0	0.0	chr10	26043150	26043186	(107754236)	+	(TC)n	Simple_repeat	1	37	(0)	411073
19206	14.4	4.5	1.5	chr10	26043187	26044557	(107752865)	C	L1M1	LINE/L1	(5809)	1756	335	411068
1501	15.1	0.0	0.0	chr10	26938838	26939055	(106858367)	+	AluSx	SINE/Alu	11	228	(84)	412593
158	18.1	2.5	5.7	chr10	27446570	27447015	(106350407)	+	(TCCT)n	Simple_repeat	1	457	(0)	413447
1535	20.3	1.9	4.4	chr10	27447016	27447335	(106350087)	C	AluJo	SINE/Alu	(0)	312	1	413448
309	31.9	2.2	1.5	chr10	27656625	27656761	(106140661)	C	MER5A	DNA/hAT-Charlie	(51)	138	1	413788
69	0.0	0.0	0.0	chr10	27656822	27656880	(106140542)	+	(GT)n	Simple_repeat	1	59	(0)	413789
28	0.0	2.8	0.0	chr10	27656881	27656912	(106140510)	+	(AG)n	Simple_repeat	2	34	(0)	413790
15	22.6	0.0	5.8	chr10	27998931	27998982	(105798440)	+	(CGC)n	Simple_repeat	1	52	(0)	414304
760	25.8	1.1	2.1	chr10	28162631	28162820	(105634602)	+	MLT1F2	LTR/ERVL-MaLR	1	188	(372)	414557
34	5.5	0.0	0.0	chr10	28162852	28162889	(105634533)	+	(TC)n	Simple_repeat	1	38	(0)	414558
1002	19.0	3.0	2.0	chr10	28162892	28163090	(105634332)	C	MLT1D	LTR/ERVL-MaLR	(268)	237	37	414559
264	21.3	1.2	0.3	chr10	28408325	28408897	(105388525)	+	(CT)n	Simple_repeat	1	580	(0)	415028
1841	17.3	0.3	1.0	chr10	28497242	28497542	(105299880)	+	AluJr	SINE/Alu	1	299	(13)	415242
94	19.1	1.6	2.7	chr10	28497543	28497794	(105299628)	+	GA-rich	Low_complexity	1	249	(0)	415243
18	17.8	0.0	4.2	chr10	28677444	28677491	(105119931)	+	G-rich	Low_complexity	1	48	(0)	415552
157	11.3	2.4	4.5	chr10	28731031	28731295	(105066127)	+	(CTTT)n	Simple_repeat	3	256	(0)	415653
2122	15.0	0.0	0.0	chr10	28731296	28731602	(105065820)	C	AluSz6	SINE/Alu	(5)	307	1	415654
16	18.4	8.4	2.6	chr10	28823266	28823336	(104974086)	+	(CTCTGC)n	Simple_repeat	1	77	(0)	415816
1274	24.4	2.2	4.8	chr10	29009605	29009979	(104787443)	C	MLT1A	LTR/ERVL-MaLR	(8)	366	2	416136
573	25.1	4.9	6.9	chr10	29010018	29010205	(104787217)	C	MER5A	DNA/hAT-Charlie	(3)	186	3	416137
1706	20.7	2.9	1.6	chr10	29203159	29203463	(104593959)	+	AluJr	SINE/Alu	1	309	(3)	416491
69	24.3	2.1	4.9	chr10	29203471	29203708	(104593714)	+	GA-rich	Low_complexity	1	243	(0)	416492
24	12.3	4.5	0.0	chr10	29380216	29380259	(104417163)	+	(CT)n	Simple_repeat	1	46	(0)	416782
11338	9.8	3.4	3.0	chr10	29436720	29438848	(104358574)	C	HERVIP10FH-int	LTR/ERV1	(2906)	2196	1	416891
2214	17.3	2.6	12.0	chr10	29445073	29445546	(104351876)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	416907
18	29.4	0.0	0.0	chr10	29509276	29509329	(104288093)	+	G-rich	Low_complexity	1	54	(0)	416989
59	0.0	0.0	0.0	chr10	29509331	29509380	(104288042)	+	(GA)n	Simple_repeat	1	50	(0)	416990
553	29.8	18.0	4.8	chr10	29651306	29651618	(104145804)	+	L2a	LINE/L2	1872	2285	(1134)	417200
36	0.0	0.0	0.0	chr10	29651619	29651649	(104145773)	+	(TC)n	Simple_repeat	1	31	(0)	417201
553	29.8	18.0	4.8	chr10	29651650	29651980	(104145442)	+	L2a	LINE/L2	2286	2619	(800)	417200
1119	25.4	11.8	2.4	chr10	29772517	29772928	(104024494)	C	LTR16D1	LTR/ERVL	(16)	659	204	417427
62	4.7	0.0	0.0	chr10	29772945	29773010	(104024412)	+	(GA)n	Simple_repeat	1	66	(0)	417428
2359	9.3	0.3	0.0	chr10	29794489	29794789	(104002633)	+	AluSx4	SINE/Alu	1	302	(8)	417478
29	5.3	2.6	0.0	chr10	29794881	29794919	(104002503)	+	(AG)n	Simple_repeat	1	40	(0)	417479
267	12.2	3.9	0.0	chr10	29807090	29807138	(103990284)	C	MLT1I	LTR/ERVL-MaLR	(14)	397	347	417502
133	13.5	5.4	0.0	chr10	29807142	29807401	(103990021)	+	GA-rich	Low_complexity	1	274	(0)	417503
1075	22.5	12.1	5.3	chr10	30218281	30218471	(103578951)	+	L1MC5a	LINE/L1	1310	1531	(1246)	418265
42	0.0	0.0	0.0	chr10	30218493	30218528	(103578894)	+	(GA)n	Simple_repeat	1	36	(0)	418272
980	29.3	8.0	11.3	chr10	30218529	30219233	(103578189)	+	L1MC4	LINE/L1	7083	7762	(280)	418273
35	10.6	0.0	0.0	chr10	30219737	30219787	(103577635)	+	(GA)n	Simple_repeat	1	51	(0)	418275
275	21.8	13.9	3.3	chr10	30219811	30219930	(103577492)	+	L1MC4	LINE/L1	6376	6441	(3)	418273
2053	10.9	1.3	1.0	chr10	30432542	30432843	(103364579)	C	AluJr4	SINE/Alu	(3)	309	7	418704
36	0.0	0.0	0.0	chr10	30432979	30433009	(103364413)	+	(GA)n	Simple_repeat	1	31	(0)	418705
44	4.4	0.0	0.0	chr10	30544107	30544153	(103253269)	+	(TC)n	Simple_repeat	1	47	(0)	418939
1927	9.9	4.6	1.5	chr10	30544156	30544456	(103252966)	C	AluSz	SINE/Alu	(0)	312	1	418940
49	0.0	0.0	0.0	chr10	31452702	31452743	(102344679)	+	(TG)n	Simple_repeat	1	42	(0)	420321
30	0.0	0.0	0.0	chr10	31452744	31452776	(102344646)	+	(AG)n	Simple_repeat	1	33	(0)	420322
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
1914	13.8	12.4	0.6	chr10	32948497	32948845	(100848577)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	422513
13	12.7	2.6	5.1	chr10	32958103	32958140	(100839282)	+	(CCGCGGC)n	Simple_repeat	1	39	(0)	422530
46	2.3	0.0	0.0	chr10	33155850	33155893	(100641529)	+	(TC)n	Simple_repeat	1	44	(0)	422867
12	11.6	3.3	3.2	chr10	33336660	33336689	(100460733)	+	(GGCA)n	Simple_repeat	1	31	(0)	423104
33	0.0	3.1	0.0	chr10	33399695	33399726	(100397696)	+	(AG)n	Simple_repeat	1	33	(0)	423200
1684	15.4	1.6	0.4	chr10	33399727	33399979	(100397443)	C	AluJb	SINE/Alu	(34)	278	23	423201
195	25.0	7.1	0.0	chr10	33479038	33479089	(100318333)	C	Tigger19b	DNA/TcMar-Tigger	(370)	180	125	423318
1963	13.2	4.2	0.0	chr10	33479232	33479504	(100317918)	C	AluSz	SINE/Alu	(27)	285	1	423319
932	21.4	10.5	4.8	chr10	33644310	33644711	(100152711)	+	MLT2B1	LTR/ERVL	1	511	(56)	423562
53	5.4	0.0	0.0	chr10	33644712	33644770	(100152652)	+	(TC)n	Simple_repeat	1	59	(0)	423563
514	22.5	15.1	5.6	chr10	33644771	33644782	(100152640)	+	MLT2B1	LTR/ERVL	512	523	(44)	423562
291	22.0	0.0	0.0	chr10	34699683	34699732	(99097690)	+	Alu	SINE/Alu	1	50	(83)	425113
913	19.0	0.0	0.0	chr10	34699733	34699874	(99097548)	+	AluJo	SINE/Alu	141	282	(30)	425114
30	24.1	1.6	6.5	chr10	34745382	34745503	(99051919)	+	GA-rich	Low_complexity	1	124	(0)	425204
47	13.8	0.0	0.0	chr10	34762232	34762311	(99035111)	+	(GAGAGA)n	Simple_repeat	1	80	(0)	425234
1664	16.8	0.0	5.0	chr10	34762312	34762608	(99034814)	C	AluJb	SINE/Alu	(30)	282	1	425235
17	4.3	0.0	0.0	chr10	35090268	35090291	(98707131)	+	(GGC)n	Simple_repeat	1	24	(0)	425943
11	20.1	9.1	2.8	chr10	35127069	35127134	(98670288)	+	(GCCGGCT)n	Simple_repeat	1	72	(0)	426040
67	0.0	0.0	0.0	chr10	35431402	35431458	(98365964)	+	(CT)n	Simple_repeat	1	57	(0)	426582
60	27.1	6.0	0.0	chr10	35643632	35643847	(98153575)	+	(TC)n	Simple_repeat	1	229	(0)	426874
1980	15.1	0.7	0.0	chr10	36545886	36546176	(97251246)	+	AluSz	SINE/Alu	3	295	(17)	428167
19	0.0	0.0	0.0	chr10	36546286	36546306	(97251116)	+	(AG)n	Simple_repeat	1	21	(0)	428168
47	0.0	4.3	0.0	chr10	36637052	36637098	(97160324)	+	(TC)n	Simple_repeat	1	49	(0)	428314
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
27	5.5	2.6	0.0	chr10	43267033	43267070	(90530352)	+	(GCGA)n	Simple_repeat	1	39	(0)	433140
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
33	0.0	0.0	0.0	chr10	44008352	44008379	(89789043)	+	(TC)n	Simple_repeat	1	28	(0)	434386
1945	14.7	3.4	4.2	chr10	44303945	44304328	(89493094)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	434682
315	29.6	6.0	3.4	chr10	44747620	44747797	(89049625)	+	LTR85b	LTR/Gypsy?	340	522	(262)	435183
5363	14.2	12.1	0.1	chr10	44747806	44748660	(89048762)	C	LTR28B	LTR/ERV1	(0)	974	3	435184
329	34.2	4.0	0.0	chr10	44764058	44764177	(89033245)	+	L2a	LINE/L2	3298	3422	(4)	435214
72	0.0	0.0	0.0	chr10	44764279	44764339	(89033083)	+	(CT)n	Simple_repeat	1	61	(0)	435216
305	21.9	3.9	1.4	chr10	44771644	44771717	(89025705)	C	MIRb	SINE/MIR	(0)	268	193	435225
267	34.9	2.7	0.9	chr10	44858023	44858132	(88939290)	C	MIRc	SINE/MIR	(27)	241	130	435318
315	24.4	2.4	0.0	chr10	44886256	44886337	(88911085)	C	L2	LINE/L2	(1506)	1913	1830	435364
70	1.6	0.0	0.0	chr10	44886338	44886401	(88911021)	+	(TC)n	Simple_repeat	1	64	(0)	435365
50	8.4	2.6	0.0	chr10	44923297	44923373	(88874049)	+	(CT)n	Simple_repeat	1	79	(0)	435419
12	17.7	3.1	0.0	chr10	44923374	44923402	(88874020)	+	(TCTC)n	Simple_repeat	3	32	(0)	435420
1757	16.1	2.0	1.4	chr10	44954675	44954965	(88842457)	+	AluJr	SINE/Alu	14	306	(6)	435457
111	20.5	3.6	2.6	chr10	44954967	44955268	(88842154)	+	GA-rich	Low_complexity	1	313	(0)	435458
287	22.6	3.5	0.0	chr10	45409376	45409459	(88387963)	C	L1MEj	LINE/L1	(1389)	771	685	436019
95	11.2	0.0	0.0	chr10	45409494	45409637	(88387785)	+	(TCTC)n	Simple_repeat	1	144	(0)	436023
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
49	3.1	6.2	0.0	chr10	45915935	45915999	(87881423)	+	(TC)n	Simple_repeat	1	69	(0)	436851
32	15.6	0.0	0.0	chr10	46043393	46043450	(87753972)	+	(CTCT)n	Simple_repeat	1	58	(0)	437074
191	17.9	0.0	2.5	chr10	46043451	46043490	(87753932)	+	MIR3	SINE/MIR	110	148	(60)	437075
372	17.7	15.1	14.6	chr10	46043613	46043662	(87753760)	C	MER5A1	DNA/hAT-Charlie	(0)	166	121	437076
2282	12.5	0.0	0.0	chr10	46043663	46043974	(87753448)	C	AluSz	SINE/Alu	(0)	312	1	437077
92	16.7	3.7	0.0	chr10	46535268	46535455	(87261967)	+	(TC)n	Simple_repeat	1	195	(0)	437820
1160	16.8	0.1	1.6	chr10	47458610	47458834	(86338588)	+	MLT2B2	LTR/ERVL	354	567	(0)	439180
235	16.7	0.0	0.0	chr10	47458853	47458888	(86338534)	C	MamGypLTR1a	LTR/Gypsy	(686)	98	63	439181
21	0.0	0.0	0.0	chr10	47458905	47458927	(86338495)	+	(CA)n	Simple_repeat	1	23	(0)	439182
49	2.2	0.0	0.0	chr10	47458928	47458973	(86338449)	+	(AG)n	Simple_repeat	1	46	(0)	439183
1570	21.0	18.8	0.4	chr10	47458990	47459518	(86337904)	C	L1MD2	LINE/L1	(10)	6349	5719	439184
21	27.7	0.0	5.5	chr10	47706073	47706163	(86091259)	+	(GCC)n	Simple_repeat	1	91	(0)	439596
1626	20.7	4.3	3.5	chr10	48301369	48301548	(85495874)	+	MLT1A	LTR/ERVL-MaLR	1	175	(199)	440370
60	4.7	0.0	0.0	chr10	48301549	48301615	(85495807)	+	(CTCTCT)n	Simple_repeat	1	67	(0)	440371
1626	20.7	4.3	3.5	chr10	48301616	48301805	(85495617)	+	MLT1A	LTR/ERVL-MaLR	176	374	(0)	440370
476	31.6	7.5	10.1	chr10	48654095	48654559	(85142863)	C	MLT1K	LTR/ERVL-MaLR	(61)	534	83	440830
15	14.1	3.0	2.9	chr10	48654669	48654701	(85142721)	+	(GT)n	Simple_repeat	1	34	(0)	440831
24	8.9	2.8	0.0	chr10	48654701	48654736	(85142686)	+	(GA)n	Simple_repeat	1	37	(0)	440832
165	13.6	2.6	3.6	chr10	48654771	48655118	(85142304)	+	(TTTC)n	Simple_repeat	1	357	(0)	440833
252	22.9	3.2	2.3	chr10	49104722	49104936	(84692486)	+	HERVIP10FH-int	LTR/ERV1	803	1019	(4083)	441451
300	22.9	14.8	4.4	chr10	49105093	49105206	(84692216)	+	L1MEd	LINE/L1	1060	1187	(5899)	441452
119	20.5	2.2	0.9	chr10	49105207	49105506	(84691916)	+	GA-rich	Low_complexity	1	303	(0)	441453
2419	27.9	11.4	8.3	chr10	49158940	49160893	(84636529)	+	L1MC4	LINE/L1	6703	8036	(6)	441529
57	0.0	0.0	0.0	chr10	49192237	49192285	(84605137)	+	(AT)n	Simple_repeat	1	49	(0)	441571
3139	27.6	7.7	2.7	chr10	49192286	49192819	(84604603)	+	L1ME3F	LINE/L1	3770	4349	(1797)	441570
204	24.6	2.5	0.0	chr10	49403423	49403934	(84393488)	+	(CTCT)n	Simple_repeat	1	525	(0)	441840
18	31.3	0.0	1.6	chr10	49701004	49701064	(84096358)	+	(AT)n	Simple_repeat	1	61	(0)	442191
52	3.2	4.7	0.0	chr10	49885058	49885121	(83912301)	+	(TC)n	Simple_repeat	1	67	(0)	442457
1316	24.6	14.1	0.2	chr10	50022846	50023309	(83774113)	+	L1ME3G	LINE/L1	36	574	(350)	442730
49	0.0	0.0	0.0	chr10	50023348	50023389	(83774033)	+	(TC)n	Simple_repeat	1	42	(0)	442731
1952	14.6	0.0	0.0	chr10	50023392	50023665	(83773757)	C	AluSx1	SINE/Alu	(19)	293	20	442732
4931	15.2	3.5	2.5	chr10	50462989	50464194	(83333228)	+	L1MB2	LINE/L1	4951	6171	(0)	443393
1286	18.6	5.9	4.7	chr10	50464199	50464443	(83332979)	+	MLT1D	LTR/ERVL-MaLR	127	379	(126)	443394
39	6.3	0.0	0.0	chr10	50891141	50891190	(82906232)	+	(CA)n	Simple_repeat	1	50	(0)	444017
57	1.9	0.0	0.0	chr10	50891191	50891243	(82906179)	+	(CT)n	Simple_repeat	1	53	(0)	444018
36	0.0	0.0	0.0	chr10	50991311	50991343	(82806079)	+	(GCC)n	Simple_repeat	1	33	(0)	444194
56	2.0	0.0	0.0	chr10	51334141	51334192	(82463230)	+	(TC)n	Simple_repeat	1	52	(0)	444687
16	13.1	0.0	0.0	chr10	51334193	51334217	(82463205)	+	(AC)n	Simple_repeat	1	25	(0)	444688
268	31.1	16.6	4.8	chr10	51334225	51334468	(82462954)	+	L2c	LINE/L2	3079	3387	(0)	444686
43	7.0	0.0	0.0	chr10	51412171	51412230	(82385192)	+	(GAGA)n	Simple_repeat	1	60	(0)	444806
857	20.8	3.2	7.6	chr10	52119710	52119951	(81677471)	C	MSTD	LTR/ERVL-MaLR	(0)	465	194	445866
49	15.3	0.0	0.0	chr10	52119954	52120040	(81677382)	+	GA-rich	Low_complexity	1	87	(0)	445867
1270	16.2	0.4	6.0	chr10	52120041	52120289	(81677133)	C	MSTD	LTR/ERVL-MaLR	(157)	239	5	445866
1988	17.4	0.0	1.0	chr10	52231116	52231420	(81566002)	+	AluJb	SINE/Alu	1	302	(10)	446005
27	3.2	0.0	0.0	chr10	52231421	52231452	(81565970)	+	(GA)n	Simple_repeat	1	32	(0)	446006
1810	14.3	0.0	0.0	chr10	52327608	52327865	(81469557)	+	AluSz6	SINE/Alu	55	312	(0)	446123
25	11.2	2.5	0.0	chr10	52327870	52327909	(81469513)	+	(AG)n	Simple_repeat	1	41	(0)	446124
33	2.6	0.0	0.0	chr10	52595504	52595542	(81201880)	+	(GT)n	Simple_repeat	1	39	(0)	446494
42	5.8	0.0	0.0	chr10	52595542	52595595	(81201827)	+	(GA)n	Simple_repeat	1	54	(0)	446495
337	6.2	0.0	0.0	chr10	52693114	52693161	(81104261)	+	Alu	SINE/Alu	252	299	(2)	446653
43	2.5	0.0	0.0	chr10	52693267	52693307	(81104115)	+	(CT)n	Simple_repeat	1	41	(0)	446654
2462	5.2	1.0	0.0	chr10	54654930	54655215	(79142207)	+	AluY	SINE/Alu	1	289	(22)	449165
74	16.8	0.0	0.0	chr10	54655219	54655349	(79142073)	+	GA-rich	Low_complexity	1	131	(0)	449166
57	1.7	3.3	0.0	chr10	54655413	54655472	(79141950)	+	(GT)n	Simple_repeat	1	62	(0)	449167
668	32.8	3.1	4.2	chr10	55547603	55547863	(78249559)	+	MLT1H1	LTR/ERVL-MaLR	9	266	(289)	450325
20	3.8	3.7	0.0	chr10	55547884	55547910	(78249512)	+	(GT)n	Simple_repeat	1	28	(0)	450326
49	0.0	0.0	0.0	chr10	55547911	55547952	(78249470)	+	(GA)n	Simple_repeat	1	42	(0)	450327
519	33.2	4.8	4.8	chr10	55547995	55548210	(78249212)	+	MLT1H1	LTR/ERVL-MaLR	294	506	(85)	450325
36	4.5	0.0	0.0	chr10	55940640	55940678	(77856744)	+	(TA)n	Simple_repeat	1	39	(0)	450805
62	0.0	0.0	0.0	chr10	55940679	55940731	(77856691)	+	(AG)n	Simple_repeat	1	53	(0)	450806
2437	12.7	3.8	0.0	chr10	55940839	55941223	(77856199)	C	MER57B1	LTR/ERV1	(0)	401	2	450807
1168	23.8	7.4	10.2	chr10	58144859	58145036	(75652386)	+	MLT1B	LTR/ERVL-MaLR	1	184	(206)	453698
38	8.8	1.6	1.6	chr10	58145037	58145099	(75652323)	+	(TC)n	Simple_repeat	1	64	(0)	453699
1168	23.8	7.4	10.2	chr10	58145100	58145322	(75652100)	+	MLT1B	LTR/ERVL-MaLR	185	390	(0)	453698
40	6.6	0.0	0.0	chr10	58892322	58892369	(74905053)	+	(TC)n	Simple_repeat	1	48	(0)	454738
58	1.9	0.0	0.0	chr10	59058649	59058702	(74738720)	+	(TC)n	Simple_repeat	1	54	(0)	455001
1002	20.7	12.1	6.5	chr10	59388106	59388284	(74409138)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	182	455502
43	2.5	0.0	0.0	chr10	59388285	59388325	(74409097)	+	(GA)n	Simple_repeat	1	41	(0)	455503
1014	21.7	11.5	6.0	chr10	59388326	59388512	(74408910)	C	MLT1B	LTR/ERVL-MaLR	(209)	181	1	455504
1589	20.0	2.4	5.9	chr10	59521930	59522129	(74275293)	+	MLT1A	LTR/ERVL-MaLR	1	188	(186)	455676
51	3.9	0.0	0.0	chr10	59522130	59522182	(74275240)	+	(TC)n	Simple_repeat	1	53	(0)	455677
1589	20.0	2.4	5.9	chr10	59522183	59522369	(74275053)	+	MLT1A	LTR/ERVL-MaLR	189	374	(0)	455676
19	12.8	0.0	0.0	chr10	59709884	59709917	(74087505)	+	(AGG)n	Simple_repeat	1	34	(0)	455972
13	27.4	0.0	6.2	chr10	59709957	59710020	(74087402)	+	(CCCGG)n	Simple_repeat	1	64	(0)	455973
7859	19.4	10.0	11.9	chr10	60157553	60157861	(73639561)	+	L1MA4	LINE/L1	2220	2534	(5031)	456667
58	4.9	0.0	0.0	chr10	60157862	60157924	(73639498)	+	(GA)n	Simple_repeat	1	63	(0)	456671
7859	19.4	10.0	11.9	chr10	60157925	60158677	(73638745)	+	L1MA4	LINE/L1	2535	3447	(4118)	456667
21	4.0	0.0	0.0	chr10	60572888	60572913	(73224509)	+	(GA)n	Simple_repeat	1	26	(0)	457267
20	7.9	0.0	0.0	chr10	60572913	60572939	(73224483)	+	(AC)n	Simple_repeat	1	27	(0)	457268
1849	17.6	2.6	2.0	chr10	60879838	60880179	(72917243)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	457770
22	0.0	0.0	0.0	chr10	60880180	60880203	(72917219)	+	(TG)n	Simple_repeat	1	24	(0)	457771
65	5.1	0.0	0.0	chr10	60880203	60880283	(72917139)	+	(GA)n	Simple_repeat	1	81	(0)	457772
72	1.5	1.4	0.0	chr10	61623835	61623903	(72173519)	+	(TC)n	Simple_repeat	1	70	(0)	458827
1924	14.3	0.7	2.0	chr10	61772227	61772520	(72024902)	+	AluJr	SINE/Alu	1	290	(22)	459023
29	0.0	0.0	0.0	chr10	61772521	61772545	(72024877)	+	(AG)n	Simple_repeat	1	25	(0)	459024
15	12.0	0.0	0.0	chr10	61772666	61772692	(72024730)	+	(AATA)n	Simple_repeat	1	27	(0)	459025
21	10.3	4.8	0.0	chr10	61903867	61903908	(71893514)	+	(CCCCTCC)n	Simple_repeat	1	44	(0)	459253
1371	17.1	2.6	6.2	chr10	62493920	62494194	(71303228)	+	AluJb	SINE/Alu	2	266	(46)	460158
38	0.0	0.0	0.0	chr10	62494199	62494231	(71303191)	+	(TC)n	Simple_repeat	1	33	(0)	460159
33	26.8	1.2	0.0	chr10	62494232	62494312	(71303110)	+	(AT)n	Simple_repeat	1	82	(0)	460160
473	32.1	2.8	2.8	chr10	62504832	62504975	(71292447)	C	MIRb	SINE/MIR	(108)	160	10	460178
36	14.4	0.0	1.6	chr10	62504987	62505049	(71292373)	+	GA-rich	Low_complexity	1	63	(0)	460179
65	1.7	0.0	0.0	chr10	62564410	62564469	(71232953)	+	(TC)n	Simple_repeat	1	60	(0)	460266
712	29.5	17.6	2.6	chr10	62752559	62752937	(71044485)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	460565
41	4.7	0.0	0.0	chr10	62753105	62753148	(71044274)	+	(TC)n	Simple_repeat	1	44	(0)	460566
18	19.9	0.0	0.0	chr10	62753149	62753183	(71044239)	+	(AC)n	Simple_repeat	1	35	(0)	460567
1233	20.7	10.2	0.3	chr10	62753225	62753577	(71043845)	C	Arthur1B	DNA/hAT-Tip100	(4)	1221	830	460568
982	23.1	0.0	1.1	chr10	63093745	63093930	(70703492)	+	FAM	SINE/Alu	1	184	(1)	461150
700	22.3	2.2	11.8	chr10	63093965	63094105	(70703317)	C	MER20B	DNA/hAT-Charlie	(599)	184	55	461149
2253	11.8	0.0	0.0	chr10	63094106	63094402	(70703020)	+	AluSq2	SINE/Alu	1	297	(16)	461151
1430	18.1	0.4	7.7	chr10	63305391	63305453	(70491969)	+	AluJr	SINE/Alu	219	277	(35)	461536
42	0.0	0.0	0.0	chr10	63305460	63305495	(70491927)	+	(CT)n	Simple_repeat	1	36	(0)	461538
67	9.8	4.4	5.4	chr10	63606258	63606384	(70191038)	+	(TTTC)n	Simple_repeat	1	124	(0)	462084
939	21.9	0.0	0.0	chr10	63606385	63606548	(70190874)	C	FRAM	SINE/Alu	(11)	165	2	462085
67	9.8	4.4	5.4	chr10	63606549	63606580	(70190842)	+	(TTTC)n	Simple_repeat	1	33	(0)	462086
12	4.3	8.3	0.0	chr10	63627933	63627956	(70169466)	+	(CTTTC)n	Simple_repeat	1	26	(0)	462127
44	9.7	0.0	0.0	chr10	63692582	63692648	(70104774)	+	(TCTC)n	Simple_repeat	1	67	(0)	462258
36	2.9	0.0	0.0	chr10	63692650	63692684	(70104738)	+	(AC)n	Simple_repeat	1	35	(0)	462259
509	31.7	2.4	1.2	chr10	63713692	63713854	(70083568)	+	MIR3	SINE/MIR	30	194	(14)	462298
17	25.9	0.0	0.0	chr10	65701523	65701569	(68095853)	+	GA-rich	Low_complexity	1	47	(0)	465081
51	2.1	0.0	0.0	chr10	65701572	65701619	(68095803)	+	(GA)n	Simple_repeat	1	48	(0)	465082
412	20.2	1.1	0.0	chr10	65701636	65701724	(68095698)	C	MLT1E3	LTR/ERVL-MaLR	(375)	278	189	465080
48	0.0	0.0	0.0	chr10	67052314	67052354	(66745068)	+	(CT)n	Simple_repeat	1	41	(0)	466972
989	14.7	3.7	6.1	chr10	67833214	67833368	(65964054)	+	MER58A	DNA/hAT-Charlie	34	190	(34)	467993
493	25.0	17.7	0.7	chr10	67833369	67833420	(65964002)	C	MER96	DNA/hAT-Tip100	(0)	175	98	467994
41	6.4	0.0	0.0	chr10	67833421	67833469	(65963953)	+	(CT)n	Simple_repeat	1	49	(0)	467995
493	25.0	17.7	0.7	chr10	67833470	67833561	(65963861)	C	MER96	DNA/hAT-Tip100	(78)	97	1	467994
989	14.7	3.7	6.1	chr10	67833562	67833601	(65963821)	+	MER58A	DNA/hAT-Charlie	191	224	(0)	467993
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
32	3.2	0.0	0.0	chr10	68203690	68203721	(65593701)	+	(CA)n	Simple_repeat	1	32	(0)	468706
24	0.0	0.0	0.0	chr10	68203722	68203747	(65593675)	+	(GA)n	Simple_repeat	1	26	(0)	468707
378	16.1	0.0	0.0	chr10	68203760	68203815	(65593607)	+	Tigger5b	DNA/TcMar-Tigger	417	472	(0)	468708
297	22.0	6.2	7.1	chr10	68203816	68203847	(65593575)	C	MER47C	DNA/TcMar-Tigger	(0)	76	1	468709
220	30.7	6.8	7.7	chr10	68203901	68204266	(65593156)	+	L2c	LINE/L2	3011	3394	(32)	468710
17	24.9	1.9	0.0	chr10	68560198	68560249	(65237173)	+	G-rich	Low_complexity	1	53	(0)	469546
11	31.8	1.7	1.6	chr10	68560750	68560809	(65236613)	+	G-rich	Low_complexity	1	61	(0)	469547
13	18.9	2.8	0.0	chr10	68561552	68561587	(65235835)	+	G-rich	Low_complexity	1	37	(0)	469548
19	20.8	0.0	6.3	chr10	68561671	68561733	(65235689)	+	(CTCC)n	Simple_repeat	1	63	(0)	469549
2463	8.7	0.3	0.0	chr10	68624278	68624588	(65172834)	C	AluSp	SINE/Alu	(1)	312	1	469703
88	11.9	1.3	1.3	chr10	68624593	68624721	(65172701)	+	(TTTC)n	Simple_repeat	1	128	(0)	469704
2560	6.4	0.0	1.0	chr10	68624722	68625032	(65172390)	C	AluY	SINE/Alu	(2)	309	2	469705
1848	14.5	3.0	0.7	chr10	69294883	69295011	(64502411)	+	AluJb	SINE/Alu	137	264	(48)	471293
33	3.1	0.0	0.0	chr10	69295012	69295044	(64502378)	+	(AG)n	Simple_repeat	1	33	(0)	471295
1848	14.5	3.0	0.7	chr10	69295045	69295069	(64502353)	+	AluJb	SINE/Alu	274	298	(14)	471293
21	12.1	0.0	0.0	chr10	69318820	69318855	(64478567)	+	(GAG)n	Simple_repeat	1	36	(0)	471359
12	24.6	0.0	2.5	chr10	69630455	69630494	(64166928)	+	(GCGG)n	Simple_repeat	1	40	(0)	471963
49	14.4	1.2	0.0	chr10	69877616	69877699	(63919723)	+	(TC)n	Simple_repeat	1	85	(0)	472427
55	0.0	0.0	0.0	chr10	69877700	69877746	(63919676)	+	(CA)n	Simple_repeat	1	47	(0)	472428
33	5.2	0.0	0.0	chr10	70132752	70132791	(63664631)	+	(CGCTCC)n	Simple_repeat	1	40	(0)	472807
847	15.4	0.8	0.0	chr10	70223084	70223206	(63574216)	+	AluJr	SINE/Alu	2	125	(187)	472993
1705	16.1	0.7	2.5	chr10	70223233	70223518	(63573904)	C	AluJr	SINE/Alu	(30)	282	2	472994
2362	10.4	0.7	0.3	chr10	70242511	70242796	(63554626)	+	AluSz	SINE/Alu	1	287	(25)	473022
29	0.0	0.0	0.0	chr10	70242797	70242821	(63554601)	+	(AG)n	Simple_repeat	1	25	(0)	473023
2362	10.4	0.7	0.3	chr10	70242822	70242844	(63554578)	+	AluSz	SINE/Alu	288	310	(2)	473022
1317	16.0	2.5	7.4	chr10	70242845	70242942	(63554480)	+	L1MB3	LINE/L1	6055	6147	(36)	473020
19	0.0	0.0	0.0	chr10	70283133	70283153	(63514269)	+	(TG)n	Simple_repeat	1	21	(0)	473105
32	3.2	0.0	0.0	chr10	70283208	70283239	(63514183)	+	(TC)n	Simple_repeat	1	32	(0)	473106
36	20.6	0.0	0.0	chr10	70283288	70283365	(63514057)	+	(TCTCTC)n	Simple_repeat	1	78	(0)	473107
18	17.0	4.3	0.0	chr10	70283404	70283449	(63513973)	+	(GTCT)n	Simple_repeat	1	48	(0)	473108
59	0.0	0.0	0.0	chr10	70451360	70451409	(63346013)	+	(GA)n	Simple_repeat	1	50	(0)	473490
19	17.5	2.2	0.0	chr10	70451430	70451445	(63345977)	+	(AAT)n	Simple_repeat	1	16	(0)	473491
2294	11.6	0.3	0.0	chr10	70451446	70451756	(63345666)	+	AluSq	SINE/Alu	1	312	(1)	473492
18	27.7	0.0	0.0	chr10	70556205	70556252	(63241170)	+	(GT)n	Simple_repeat	1	48	(0)	473707
43	6.3	0.0	0.0	chr10	70556280	70556329	(63241093)	+	(CT)n	Simple_repeat	1	50	(0)	473708
231	32.9	0.0	5.8	chr10	70670890	70670976	(63126446)	C	MIR1_Amn	SINE/MIR	(78)	152	71	473919
73	5.7	2.2	0.0	chr10	70671018	70671109	(63126313)	+	(TC)n	Simple_repeat	1	94	(0)	473920
59	34.6	2.7	1.0	chr10	70913229	70913528	(62883894)	+	GA-rich	Low_complexity	1	305	(0)	474320
198	26.0	1.3	6.1	chr10	71377767	71377848	(62419574)	C	MIRb	SINE/MIR	(1)	267	190	475124
44	0.0	0.0	0.0	chr10	71515358	71515395	(62282027)	+	(TC)n	Simple_repeat	1	38	(0)	475431
29	5.7	0.0	0.0	chr10	71515396	71515432	(62281990)	+	(AC)n	Simple_repeat	1	37	(0)	475432
43	12.6	1.4	0.0	chr10	71658244	71658313	(62139109)	+	(AG)n	Simple_repeat	1	71	(0)	475686
35	6.7	2.1	0.0	chr10	71889322	71889368	(61908054)	+	(CT)n	Simple_repeat	1	48	(0)	476116
19443	13.7	4.8	5.6	chr10	71939839	71943821	(61853601)	+	Harlequin-int	LTR/ERV1	1	3949	(2947)	476248
18	15.0	0.0	0.0	chr10	72027510	72027539	(61769883)	+	(GT)n	Simple_repeat	1	30	(0)	476380
15	0.0	0.0	0.0	chr10	72027666	72027682	(61769740)	+	(AG)n	Simple_repeat	1	17	(0)	476381
22	3.9	0.0	0.0	chr10	72055820	72055846	(61741576)	+	(GA)n	Simple_repeat	1	27	(0)	476449
26	3.1	3.0	0.0	chr10	72055897	72055929	(61741493)	+	(TGTT)n	Simple_repeat	1	34	(0)	476450
364	13.9	10.9	2.8	chr10	72055935	72056056	(61741366)	C	MIR3	SINE/MIR	(24)	206	69	476451
17	10.7	4.5	4.3	chr10	72260962	72261005	(61536417)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	476891
15	28.3	4.4	0.0	chr10	72319618	72319685	(61477737)	+	(GGCCGCG)n	Simple_repeat	1	71	(0)	477042
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
1801	17.1	0.3	1.7	chr10	72612516	72612814	(61184608)	+	AluJr4	SINE/Alu	2	296	(16)	477644
508	25.9	2.6	1.3	chr10	72703204	72703352	(61094070)	C	MIR	SINE/MIR	(44)	218	68	477866
300	26.9	3.1	2.1	chr10	72703358	72703452	(61093970)	C	MIR	SINE/MIR	(156)	106	11	477863
407	20.8	17.6	4.3	chr10	72703535	72703622	(61093800)	C	MER112	DNA/hAT-Charlie	(16)	245	159	477867
33	17.9	1.4	2.7	chr10	72742985	72743057	(61054365)	+	GA-rich	Low_complexity	1	74	(0)	477959
2234	11.8	0.0	1.3	chr10	72743127	72743432	(61053990)	+	AluSx1	SINE/Alu	1	302	(10)	477960
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
647	29.4	4.3	2.6	chr10	73998479	73998705	(59798717)	+	MIRb	SINE/MIR	30	260	(8)	480358
17	18.2	0.0	4.9	chr10	74308843	74308889	(59488533)	+	(CT)n	Simple_repeat	1	44	(0)	480989
1644	20.7	2.0	0.3	chr10	74475429	74475727	(59321695)	+	AluJb	SINE/Alu	1	304	(8)	481249
42	18.2	6.8	0.0	chr10	74475728	74475841	(59321581)	+	GA-rich	Low_complexity	3	124	(0)	481250
16	3.4	6.2	2.9	chr10	74475817	74475848	(59321574)	+	(GGAG)n	Simple_repeat	1	34	(0)	481251
2284	22.9	2.5	2.2	chr10	74475850	74476211	(59321211)	C	L1MD3	LINE/L1	(1105)	6777	6421	481243
1752	17.1	3.2	0.7	chr10	74665460	74665734	(59131688)	+	AluJr4	SINE/Alu	1	282	(30)	481572
54	0.0	0.0	0.0	chr10	74665737	74665782	(59131640)	+	(GA)n	Simple_repeat	1	46	(0)	481573
23	17.8	0.0	6.2	chr10	74665784	74665848	(59131574)	+	GA-rich	Low_complexity	1	65	(0)	481574
300	28.7	6.8	11.3	chr10	74823844	74824028	(58973394)	C	MER131	DNA?	(0)	215	40	481939
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
513	31.0	10.2	1.4	chr10	74831696	74831932	(58965490)	C	MIRb	SINE/MIR	(7)	261	8	481955
742	25.2	9.1	1.6	chr10	74921831	74922084	(58875338)	+	MamSINE1	SINE/tRNA-RTE	15	289	(1)	482130
15	19.6	0.0	0.0	chr10	75401501	75401535	(58395887)	+	(GGAGCA)n	Simple_repeat	1	35	(0)	483053
16	24.5	0.0	6.2	chr10	75401683	75401747	(58395675)	+	(GCTGC)n	Simple_repeat	1	65	(0)	483054
13	13.2	0.0	0.0	chr10	75403419	75403443	(58393979)	+	(GAGG)n	Simple_repeat	1	25	(0)	483057
17	12.2	2.6	2.6	chr10	75509023	75509060	(58288362)	+	(TTTCTT)n	Simple_repeat	1	39	(0)	483210
21	20.5	3.9	0.0	chr10	75614133	75614183	(58183239)	+	(TC)n	Simple_repeat	1	53	(0)	483356
572	27.3	3.8	6.8	chr10	76086768	76087015	(57710407)	C	UCON89	DNA/hAT?	(0)	242	3	484035
1420	19.1	1.7	5.9	chr10	77215680	77215878	(56581544)	+	MLT1A	LTR/ERVL-MaLR	1	188	(186)	485537
49	0.0	5.8	0.0	chr10	77215879	77215930	(56581492)	+	(TC)n	Simple_repeat	1	55	(0)	485538
1420	19.1	1.7	5.9	chr10	77215931	77216036	(56581386)	+	MLT1A	LTR/ERVL-MaLR	189	293	(81)	485537
1636	16.7	3.7	3.4	chr10	77216042	77216363	(56581059)	+	L1MB8	LINE/L1	5855	6177	(1)	485539
390	23.6	1.1	0.0	chr10	77305886	77305974	(56491448)	C	UCON29	DNA/PiggyBac?	(34)	405	316	485675
489	26.0	8.7	3.9	chr10	77542696	77542903	(56254519)	+	HAL1b	LINE/L1	12	230	(2191)	486131
1216	25.6	15.7	3.5	chr10	77543089	77543743	(56253679)	+	HAL1b	LINE/L1	338	1087	(1334)	486131
1130	27.1	5.3	10.4	chr10	77663248	77663563	(56133859)	C	L1MC5a	LINE/L1	(1905)	872	561	486357
48	0.0	0.0	0.0	chr10	77663564	77663604	(56133818)	+	(AC)n	Simple_repeat	1	41	(0)	486358
1130	27.1	5.3	10.4	chr10	77663605	77663922	(56133500)	C	L1MC5a	LINE/L1	(2217)	560	272	486357
13	11.1	9.8	2.2	chr10	77927144	77927184	(55870238)	+	GA-rich	Low_complexity	1	45	(0)	486827
90	30.2	0.0	0.4	chr10	78197170	78197430	(55599992)	+	(GT)n	Simple_repeat	1	261	(0)	487364
30	3.5	0.0	0.0	chr10	78197431	78197460	(55599962)	+	(GA)n	Simple_repeat	1	30	(0)	487365
229	31.5	8.3	0.0	chr10	78197560	78197670	(55599752)	C	L2a	LINE/L2	(19)	3407	3287	487366
16	21.1	0.0	0.0	chr10	78303349	78303387	(55494035)	+	(CCTCC)n	Simple_repeat	1	39	(0)	487571
13	19.0	0.0	5.0	chr10	78303451	78303490	(55493932)	+	(CCGC)n	Simple_repeat	1	40	(0)	487572
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
22	20.9	4.8	5.5	chr10	79242947	79243050	(54554372)	+	G-rich	Low_complexity	1	109	(0)	489320
15	14.2	3.0	10.1	chr10	79347551	79347617	(54449805)	+	(GCTGC)n	Simple_repeat	1	69	(0)	489469
222	20.7	8.4	4.0	chr10	79347828	79347922	(54449500)	+	MIR3	SINE/MIR	81	175	(93)	489470
216	30.5	0.0	3.3	chr10	79405952	79406012	(54391410)	+	MIR3	SINE/MIR	90	148	(60)	489555
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
2081	11.6	1.4	0.3	chr10	79473951	79474234	(54323188)	+	AluSz6	SINE/Alu	1	287	(25)	489705
41	0.0	0.0	0.0	chr10	79474235	79474269	(54323153)	+	(AG)n	Simple_repeat	1	35	(0)	489706
55	0.0	0.0	0.0	chr10	79912060	79912106	(53885316)	+	(AG)n	Simple_repeat	1	47	(0)	490321
425	4.5	1.5	2.9	chr10	79912210	79912278	(53885144)	+	L1PREC2	LINE/L1	2325	2392	(3754)	490322
27	9.9	0.0	0.0	chr10	80198730	80198772	(53598650)	+	(AGAG)n	Simple_repeat	1	43	(0)	490849
72	0.0	0.0	0.0	chr10	80511712	80511772	(53285650)	+	(CT)n	Simple_repeat	1	61	(0)	491335
20	8.6	5.3	0.0	chr10	80511777	80511814	(53285608)	+	(TTTCTC)n	Simple_repeat	1	40	(0)	491336
671	24.6	0.0	0.8	chr10	80511816	80511949	(53285473)	C	FLAM_A	SINE/Alu	(9)	133	1	491337
1563	18.6	6.1	18.6	chr10	81931950	81932443	(51864979)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	493243
757	34.9	11.8	3.2	chr10	83638956	83639816	(50157606)	C	L2	LINE/L2	(884)	2535	1592	495668
57	0.0	0.0	0.0	chr10	83639833	83639881	(50157541)	+	(AG)n	Simple_repeat	1	49	(0)	495669
1532	20.0	5.5	2.9	chr10	83911604	83911809	(49885613)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	189	496007
48	4.1	0.0	0.0	chr10	83911810	83911859	(49885563)	+	(GA)n	Simple_repeat	1	50	(0)	496008
1532	20.0	5.5	2.9	chr10	83911860	83911992	(49885430)	C	MLT1B	LTR/ERVL-MaLR	(202)	188	42	496007
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
258	13.5	12.3	2.9	chr10	84602292	84603255	(49194167)	+	(CT)n	Simple_repeat	1	1083	(0)	497099
785	29.2	4.3	7.0	chr10	85568441	85568946	(48228476)	C	L1MEf	LINE/L1	(4425)	1990	1500	498293
56	18.0	0.0	0.9	chr10	85568947	85569051	(48228371)	+	(CT)n	Simple_repeat	1	105	(0)	498295
2276	10.1	0.7	0.0	chr10	85633890	85634185	(48163237)	+	AluSp	SINE/Alu	1	298	(15)	498386
50	0.0	0.0	0.0	chr10	85634250	85634292	(48163130)	+	(CT)n	Simple_repeat	1	43	(0)	498387
22	3.4	0.0	5.9	chr10	85634293	85634322	(48163100)	+	(CA)n	Simple_repeat	2	30	(0)	498388
1508	27.1	5.1	1.5	chr10	85882796	85883461	(47913961)	C	L1MEd	LINE/L1	(5679)	1424	734	498660
61	6.2	2.4	0.0	chr10	85883483	85883566	(47913856)	+	(TCTC)n	Simple_repeat	1	86	(0)	498664
24	6.1	2.9	0.0	chr10	86259315	86259348	(47538074)	+	(CT)n	Simple_repeat	1	35	(0)	499207
20	25.6	3.8	4.5	chr10	86366085	86366115	(47431307)	+	(GCGGC)n	Simple_repeat	1	48	(62)	499367
12	21.8	2.7	0.0	chr10	86366116	86366152	(47431270)	+	G-rich	Low_complexity	1	38	(0)	499368
20	25.6	3.8	4.5	chr10	86366153	86366190	(47431232)	+	(GCGGC)n	Simple_repeat	49	110	(0)	499367
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
23	0.0	0.0	0.0	chr10	87203368	87203392	(46594030)	+	(AG)n	Simple_repeat	1	25	(0)	500922
403	28.4	4.5	0.7	chr10	87203523	87203671	(46593751)	+	LTR41B	LTR/ERVL	1	155	(603)	500923
2377	15.2	7.4	0.9	chr10	87585968	87586432	(46210990)	C	LTR44	LTR/ERV1	(3)	516	19	501500
1686	20.2	0.0	1.0	chr10	87701433	87701724	(46095698)	C	AluJr	SINE/Alu	(23)	289	1	501691
6271	12.9	9.1	0.9	chr10	87845092	87846218	(45951204)	C	Tigger3b	DNA/TcMar-Tigger	(1)	1230	2	501903
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
33	17.1	0.0	0.0	chr10	88058339	88058397	(45739025)	+	(TG)n	Simple_repeat	1	59	(0)	502244
56	1.9	0.0	0.0	chr10	88058398	88058449	(45738973)	+	(GA)n	Simple_repeat	1	52	(0)	502245
294	31.6	3.8	7.3	chr10	88058461	88058733	(45738689)	C	L2-1_AMi	LINE/L2	(717)	518	256	502246
16400	10.4	2.3	3.0	chr10	88690717	88691728	(45105694)	+	L1M1	LINE/L1	2436	3417	(4148)	503198
1544	19.2	8.0	8.7	chr10	89293495	89293674	(44503748)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	191	504163
43	0.0	0.0	2.4	chr10	89293675	89293715	(44503707)	+	(GA)n	Simple_repeat	1	41	(0)	504164
1544	19.2	8.0	8.7	chr10	89293716	89293927	(44503495)	C	MLT1B	LTR/ERVL-MaLR	(200)	190	2	504163
19	6.7	0.0	3.0	chr10	89414685	89414717	(44382705)	+	(GCACGC)n	Simple_repeat	1	33	(0)	504339
33	5.0	4.4	4.2	chr10	90858056	90858123	(42939299)	+	(CCG)n	Simple_repeat	1	71	(0)	506428
18	25.9	1.3	5.2	chr10	91410354	91410429	(42386993)	+	(CGC)n	Simple_repeat	1	77	(0)	507282
55	3.7	0.0	0.0	chr10	91609148	91609203	(42188219)	+	(TC)n	Simple_repeat	1	56	(0)	507574
35	12.3	0.0	0.0	chr10	91609204	91609249	(42188173)	+	(AC)n	Simple_repeat	1	46	(0)	507575
971	28.7	8.5	2.4	chr10	91720894	91721268	(42076154)	+	LTR33	LTR/ERVL	116	515	(0)	507758
32	5.2	2.5	0.0	chr10	91721308	91721347	(42076075)	+	(TC)n	Simple_repeat	1	41	(0)	507759
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
29	6.1	0.0	0.0	chr10	91909576	91909609	(41887813)	+	(TC)n	Simple_repeat	1	34	(0)	508070
66	12.9	0.8	3.1	chr10	92440695	92440821	(41356601)	+	(TTTC)n	Simple_repeat	1	128	(0)	509143
2229	12.7	0.3	1.3	chr10	92440822	92441136	(41356286)	C	AluSx	SINE/Alu	(0)	312	1	509144
34	4.6	2.2	0.0	chr10	92609259	92609303	(41188119)	+	(GA)n	Simple_repeat	1	46	(0)	509512
47	0.0	0.0	0.0	chr10	92609304	92609343	(41188079)	+	(GT)n	Simple_repeat	1	40	(0)	509513
784	24.3	0.0	0.0	chr10	92735283	92735461	(41061961)	C	AluJb	SINE/Alu	(0)	312	130	509777
38	2.8	0.0	0.0	chr10	92735475	92735511	(41061911)	+	(AC)n	Simple_repeat	1	37	(0)	509778
29	3.0	0.0	0.0	chr10	92735512	92735545	(41061877)	+	(GA)n	Simple_repeat	1	34	(0)	509779
825	10.8	12.7	5.8	chr10	92735547	92735685	(41061737)	+	FRAM	SINE/Alu	2	151	(25)	509780
5341	25.8	5.1	6.0	chr10	92767091	92768817	(41028605)	+	L1M4	LINE/L1	187	1900	(5617)	509852
34	0.0	0.0	0.0	chr10	92991726	92991754	(40805668)	+	(TC)n	Simple_repeat	1	29	(0)	510271
42	0.0	0.0	0.0	chr10	93354667	93354702	(40442720)	+	(CT)n	Simple_repeat	1	36	(0)	510952
859	26.5	1.4	0.5	chr10	93354710	93354921	(40442501)	+	MIR	SINE/MIR	1	214	(48)	510953
362	20.6	3.9	15.7	chr10	93443169	93443270	(40354152)	C	L1MEc	LINE/L1	(5441)	959	864	511117
1206	19.6	9.9	9.2	chr10	93443330	93443413	(40354009)	C	L1MEc	LINE/L1	(5921)	479	386	511117
43	3.4	6.7	0.0	chr10	93443414	93443473	(40353949)	+	(CT)n	Simple_repeat	1	64	(0)	511119
1217	19.6	9.9	9.2	chr10	93443474	93443799	(40353623)	C	L1MEc	LINE/L1	(6015)	385	66	511117
33	0.0	0.0	0.0	chr10	93564813	93564840	(40232582)	+	(TC)n	Simple_repeat	1	28	(0)	511381
15	5.6	0.0	0.0	chr10	93564841	93564859	(40232563)	+	(AC)n	Simple_repeat	1	19	(0)	511382
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
327	31.1	14.8	3.5	chr10	93703852	93704048	(40093374)	C	MIRb	SINE/MIR	(17)	251	29	511627
37	6.4	2.0	0.0	chr10	93704050	93704098	(40093324)	+	(TC)n	Simple_repeat	1	50	(0)	511628
85	3.5	1.1	0.0	chr10	93831237	93831325	(39966097)	+	(TC)n	Simple_repeat	1	90	(0)	511878
1787	17.4	0.0	0.0	chr10	93831326	93831583	(39965839)	C	AluJr	SINE/Alu	(54)	258	1	511879
37	0.0	0.0	0.0	chr10	94106913	94106944	(39690478)	+	(TC)n	Simple_repeat	1	32	(0)	512392
33	0.0	0.0	0.0	chr10	94255879	94255914	(39541508)	+	(CA)n	Simple_repeat	1	36	(0)	512652
50	0.0	0.0	0.0	chr10	94255915	94255957	(39541465)	+	(CT)n	Simple_repeat	1	43	(0)	512653
30134	5.8	0.8	1.2	chr10	94384949	94387397	(39410025)	+	Harlequin-int	LTR/ERV1	1	2438	(4458)	512896
22	29.4	1.3	0.0	chr10	94402731	94402759	(39394663)	+	(GGCGGA)n	Simple_repeat	1	73	(0)	512920
23	15.7	0.0	0.0	chr10	94402760	94402802	(39394620)	+	GA-rich	Low_complexity	1	43	(0)	512921
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
16	26.4	2.8	2.7	chr10	95291011	95291081	(38506341)	+	G-rich	Low_complexity	1	73	(0)	514030
41	4.8	0.0	0.0	chr10	95357355	95357398	(38440024)	+	(GA)n	Simple_repeat	1	44	(0)	514147
801	26.9	0.0	0.0	chr10	95421021	95421195	(38376227)	+	AluJr	SINE/Alu	137	311	(1)	514237
21	10.0	3.0	0.0	chr10	95421196	95421228	(38376194)	+	(GA)n	Simple_repeat	1	34	(0)	514238
517	23.4	1.5	0.8	chr10	95475836	95475964	(38321458)	C	MIRb	SINE/MIR	(112)	156	27	514334
199	25.5	0.0	0.0	chr10	95475985	95476035	(38321387)	C	L2b	LINE/L2	(5)	3370	3320	514335
48	0.0	0.0	0.0	chr10	95479958	95479998	(38317424)	+	(CT)n	Simple_repeat	1	41	(0)	514341
236	29.8	3.5	0.0	chr10	95479999	95480082	(38317340)	+	MER113	DNA/hAT-Charlie	103	189	(332)	514342
1128	12.7	0.0	0.0	chr10	95598805	95598954	(38198468)	+	AluSx3	SINE/Alu	132	281	(30)	514587
29	0.0	0.0	0.0	chr10	95598955	95598986	(38198436)	+	(TC)n	Simple_repeat	1	32	(0)	514588
55	11.8	0.0	0.0	chr10	96250382	96250464	(37546958)	+	(GA)n	Simple_repeat	1	83	(0)	515634
401	29.9	13.3	7.2	chr10	96415221	96415606	(37381816)	+	L2c	LINE/L2	2970	3382	(5)	515923
53	5.3	0.0	0.0	chr10	96415717	96415775	(37381647)	+	(CT)n	Simple_repeat	1	59	(0)	515924
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
15	25.1	2.8	4.1	chr10	96720434	96720504	(37076918)	+	G-rich	Low_complexity	1	73	(0)	516503
12	15.7	2.6	5.0	chr10	96720577	96720615	(37076807)	+	(GCCCGCG)n	Simple_repeat	1	40	(0)	516504
1381	17.7	9.2	1.8	chr10	97172635	97172917	(36624505)	+	AluJr	SINE/Alu	2	307	(5)	517382
31	13.3	3.3	1.6	chr10	97172918	97172977	(36624445)	+	GA-rich	Low_complexity	1	62	(0)	517383
226	32.3	5.8	13.4	chr10	97348850	97348971	(36448451)	+	L2b	LINE/L2	3207	3322	(53)	517777
38	0.0	0.0	0.0	chr10	97349014	97349046	(36448376)	+	(GA)n	Simple_repeat	1	33	(0)	517781
26	0.0	0.0	0.0	chr10	97349047	97349075	(36448347)	+	(TG)n	Simple_repeat	1	29	(0)	517782
2515	6.3	0.0	0.0	chr10	97349112	97349411	(36448011)	+	AluY	SINE/Alu	1	300	(11)	517783
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
35	0.0	0.0	0.0	chr10	97808387	97808416	(35989006)	+	(CT)n	Simple_repeat	1	30	(0)	518788
2179	12.1	0.0	0.7	chr10	97808417	97808714	(35988708)	C	AluSz	SINE/Alu	(15)	297	2	518789
53	0.0	0.0	0.0	chr10	97840249	97840293	(35957129)	+	(AG)n	Simple_repeat	1	45	(0)	518854
327	21.9	16.6	0.0	chr10	97950116	97950211	(35847211)	+	MIRc	SINE/MIR	114	223	(45)	519068
51	0.0	0.0	0.0	chr10	97950247	97950290	(35847132)	+	(AG)n	Simple_repeat	1	44	(0)	519069
17	13.2	0.0	2.9	chr10	98030516	98030550	(35766872)	+	(CGC)n	Simple_repeat	1	35	(0)	519221
56	0.0	0.0	0.0	chr10	98045352	98045399	(35752023)	+	(GA)n	Simple_repeat	1	48	(0)	519255
2626	19.5	4.0	7.5	chr10	98287059	98287098	(35510324)	C	MLT2B3	LTR/ERVL	(2)	552	515	519657
42	4.7	0.0	0.0	chr10	98287099	98287143	(35510279)	+	(CT)n	Simple_repeat	1	45	(0)	519658
2626	19.5	4.0	7.5	chr10	98287144	98287674	(35509748)	C	MLT2B3	LTR/ERVL	(40)	514	2	519657
25	16.3	0.0	0.0	chr10	99235904	99235986	(34561436)	+	(CTCG)n	Simple_repeat	1	83	(0)	521117
71	20.1	1.6	3.7	chr10	99340692	99340876	(34456546)	+	(TTCT)n	Simple_repeat	1	188	(0)	521303
1272	16.8	2.8	1.4	chr10	99581552	99581760	(34215662)	+	AluJb	SINE/Alu	83	294	(18)	521748
34	12.9	0.0	0.0	chr10	99581761	99581819	(34215603)	+	(GA)n	Simple_repeat	1	59	(0)	521749
2415	6.8	0.7	0.0	chr10	99581820	99582112	(34215310)	C	AluSp	SINE/Alu	(18)	295	1	521750
49	2.2	0.0	0.0	chr10	99778434	99778479	(34018943)	+	(AG)n	Simple_repeat	1	46	(0)	522098
553	22.8	1.2	0.0	chr10	99778481	99778600	(34018822)	C	FLAM_C	SINE/Alu	(84)	218	2	522099
51	22.2	1.6	0.0	chr10	100087898	100088018	(33709404)	+	GA-rich	Low_complexity	1	123	(0)	522705
384	18.7	10.7	0.0	chr10	100127234	100127308	(33670114)	C	AluJb	SINE/Alu	(228)	84	1	522797
29	0.0	0.0	0.0	chr10	100127344	100127368	(33670054)	+	(TC)n	Simple_repeat	1	25	(0)	522798
787	17.9	0.0	0.8	chr10	100127369	100127497	(33669925)	C	FLAM_C	SINE/Alu	(14)	129	1	522799
2103	20.7	11.1	4.8	chr10	100223908	100224086	(33573336)	+	MLT1F1	LTR/ERVL-MaLR	1	199	(370)	522969
29	0.0	0.0	0.0	chr10	100224087	100224111	(33573311)	+	(CT)n	Simple_repeat	1	25	(0)	522970
2103	20.7	11.1	4.8	chr10	100224112	100224434	(33572988)	+	MLT1F1	LTR/ERVL-MaLR	200	539	(30)	522969
2027	10.0	1.8	0.0	chr10	100365182	100365450	(33431972)	C	AluSq2	SINE/Alu	(39)	274	1	523213
37	0.0	0.0	0.0	chr10	100371705	100371736	(33425686)	+	(GA)n	Simple_repeat	1	32	(0)	523224
910	10.7	0.0	0.8	chr10	100371786	100371907	(33425515)	C	AluJo	SINE/Alu	(190)	122	2	523225
45	15.9	2.1	3.0	chr10	100613761	100613857	(33183565)	+	GA-rich	Low_complexity	1	99	(0)	523666
1238	22.3	6.6	15.1	chr10	100629570	100629877	(33167545)	+	MLT1A1	LTR/ERVL-MaLR	87	375	(33)	523688
2056	9.5	5.2	0.0	chr10	100629878	100630150	(33167272)	+	AluSx1	SINE/Alu	3	290	(22)	523690
38	26.0	4.0	0.8	chr10	100654348	100654472	(33142950)	+	(TC)n	Simple_repeat	1	130	(0)	523735
14	13.8	0.0	5.6	chr10	100744304	100744339	(33053083)	+	G-rich	Low_complexity	1	36	(0)	523904
55	10.7	0.0	0.0	chr10	100804942	100805018	(32992404)	+	(TC)n	Simple_repeat	1	77	(0)	523989
62	1.8	0.0	0.0	chr10	100805019	100805075	(32992347)	+	(CA)n	Simple_repeat	1	57	(0)	523990
2126	9.6	0.0	1.0	chr10	100869949	100870241	(32927181)	+	AluSx	SINE/Alu	1	290	(22)	524101
38	2.8	0.0	0.0	chr10	100870242	100870278	(32927144)	+	(AG)n	Simple_repeat	1	37	(0)	524102
15	24.3	1.8	3.5	chr10	101131171	101131227	(32666195)	+	(CCCTC)n	Simple_repeat	1	58	(0)	524524
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
13	21.1	4.5	5.7	chr10	101230283	101230349	(32567073)	+	(CCGGCT)n	Simple_repeat	1	70	(0)	524696
32	3.2	0.0	0.0	chr10	101231701	101231732	(32565690)	+	(AG)n	Simple_repeat	1	32	(0)	524698
38	21.6	4.3	5.9	chr10	101429479	101429641	(32367781)	+	(TCTTCC)n	Simple_repeat	1	170	(0)	525105
21	4.0	0.0	0.0	chr10	101442263	101442288	(32355134)	+	(TC)n	Simple_repeat	1	26	(0)	525127
31	3.3	0.0	0.0	chr10	101442289	101442319	(32355103)	+	(TG)n	Simple_repeat	1	31	(0)	525128
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
21	7.7	0.0	0.0	chr10	101787760	101787787	(32009635)	+	(CT)n	Simple_repeat	1	28	(0)	525675
594	22.0	0.0	0.0	chr10	101787792	101787891	(32009531)	C	AluJb	SINE/Alu	(212)	100	1	525674
13	9.3	0.0	0.0	chr10	101818949	101818971	(31978451)	+	(TCAT)n	Simple_repeat	1	23	(0)	525733
26	0.0	0.0	0.0	chr10	101944245	101944273	(31853149)	+	(TA)n	Simple_repeat	1	29	(0)	525952
66	0.0	0.0	0.0	chr10	101944274	101944329	(31853093)	+	(AG)n	Simple_repeat	1	56	(0)	525953
987	22.5	3.9	3.8	chr10	101944331	101944531	(31852891)	+	L1MEc	LINE/L1	1278	1473	(4927)	525949
35	0.0	0.0	0.0	chr10	101976384	101976413	(31821009)	+	(TC)n	Simple_repeat	1	30	(0)	526013
524	19.4	11.0	0.0	chr10	102046115	102046243	(31751179)	C	MIR	SINE/MIR	(2)	260	116	526160
57	14.9	3.3	1.6	chr10	102046251	102046370	(31751052)	+	A-rich	Low_complexity	1	124	(0)	526161
27	45.6	0.0	0.0	chr10	102046252	102046368	(31751054)	+	GA-rich	Low_complexity	1	117	(0)	526162
2264	9.8	1.6	1.0	chr10	102046373	102046679	(31750743)	+	AluSp	SINE/Alu	1	309	(4)	526163
19	19.2	0.0	0.0	chr10	102114877	102114918	(31682504)	+	(CACTCA)n	Simple_repeat	1	42	(0)	526320
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
17	17.7	6.6	3.1	chr10	102117635	102117695	(31679727)	+	(TCC)n	Simple_repeat	1	65	(0)	526326
15	13.7	7.5	0.0	chr10	102120787	102120826	(31676596)	+	(GAGCCG)n	Simple_repeat	1	43	(0)	526333
243	35.5	12.3	1.1	chr10	102122249	102122436	(31674986)	+	MIRb	SINE/MIR	27	238	(30)	526334
2525	4.4	0.0	0.7	chr10	102169696	102169992	(31627430)	+	AluYk3	SINE/Alu	2	296	(15)	526419
236	14.7	9.3	11.7	chr10	102169993	102170050	(31627372)	C	L2c	LINE/L2	(24)	3363	3305	526418
29	0.0	3.2	0.0	chr10	102170088	102170118	(31627304)	+	(GTTT)n	Simple_repeat	1	32	(0)	526420
2251	5.5	0.0	0.7	chr10	102170119	102170390	(31627032)	C	AluYc	SINE/Alu	(29)	270	1	526421
18	13.2	0.0	0.0	chr10	102230673	102230705	(31566717)	+	(GGC)n	Simple_repeat	1	33	(0)	526553
15	22.3	5.1	1.6	chr10	102230750	102230808	(31566614)	+	(GCCCGG)n	Simple_repeat	1	62	(0)	526554
1729	17.2	0.7	2.5	chr10	102279847	102280131	(31517291)	+	AluJo	SINE/Alu	12	291	(21)	526646
22	21.9	4.6	1.5	chr10	102280132	102280196	(31517226)	+	GA-rich	Low_complexity	1	68	(0)	526647
33	8.9	0.0	2.0	chr10	102432858	102432908	(31364514)	+	(TC)n	Simple_repeat	1	51	(0)	526899
2556	7.1	0.0	0.0	chr10	102432914	102433224	(31364198)	C	AluSx3	SINE/Alu	(0)	311	1	526900
12	11.5	3.3	3.2	chr10	102450877	102450906	(31346516)	+	(GCGGC)n	Simple_repeat	1	31	(0)	526950
1070	21.8	7.6	20.4	chr10	102858178	102858367	(30939055)	+	L1MC5a	LINE/L1	642	776	(2001)	527729
2261	13.3	2.5	2.7	chr10	103504292	103504694	(30292728)	C	L1MC3	LINE/L1	(266)	7519	7118	529101
273	24.2	14.5	6.8	chr10	103504780	103504912	(30292510)	C	L2b	LINE/L2	(140)	3235	3091	529098
23	10.2	0.0	6.1	chr10	104076846	104076894	(29720528)	+	(TTGTT)n	Simple_repeat	1	49	(0)	530140
105	3.9	0.0	0.0	chr10	104396370	104396476	(29400946)	+	(GA)n	Simple_repeat	1	107	(0)	530641
780	27.2	8.1	7.5	chr10	104479909	104480045	(29317377)	+	MLT1K	LTR/ERVL-MaLR	431	589	(6)	530768
72	2.4	4.6	0.0	chr10	106195169	106195255	(27602167)	+	(ATAG)n	Simple_repeat	1	91	(0)	533347
55	11.2	2.3	0.0	chr10	106195280	106195367	(27602055)	+	(AG)n	Simple_repeat	1	90	(0)	533348
4220	19.3	3.5	1.3	chr10	106195498	106196423	(27600999)	C	L1MA9	LINE/L1	(0)	6312	5366	533349
49	2.2	0.0	0.0	chr10	107492883	107492928	(26304494)	+	(GA)n	Simple_repeat	1	46	(0)	535333
43	0.0	0.0	0.0	chr10	108702026	108702062	(25095360)	+	(AG)n	Simple_repeat	1	37	(0)	536989
61	23.2	0.0	0.7	chr10	108702063	108702180	(25095242)	+	(AT)n	Simple_repeat	1	117	(0)	536990
50	0.0	0.0	0.0	chr10	108702181	108702223	(25095199)	+	(AG)n	Simple_repeat	1	43	(0)	536991
274	34.3	6.4	1.0	chr10	108702239	108702341	(25095081)	C	MamTip2	DNA/hAT-Tip100	(156)	149	41	536992
434	29.3	10.3	0.5	chr10	110040581	110040772	(23756650)	C	L2	LINE/L2	(530)	2889	2677	538824
62	5.9	0.0	0.0	chr10	110040916	110040986	(23756436)	+	(CT)n	Simple_repeat	1	71	(0)	538825
342	33.9	5.1	5.1	chr10	110041084	110041357	(23756065)	C	L2	LINE/L2	(925)	2494	2221	538824
29	6.2	0.0	0.0	chr10	110065479	110065512	(23731910)	+	(TC)n	Simple_repeat	1	34	(0)	538863
258	29.5	9.5	0.0	chr10	110079308	110079402	(23718020)	C	HAL1ME	LINE/L1	(18)	2447	2343	538879
31	0.0	0.0	0.0	chr10	110079428	110079461	(23717961)	+	(GA)n	Simple_repeat	1	34	(0)	538880
585	21.8	5.5	0.6	chr10	110163341	110163497	(23633925)	+	MER103C	DNA/hAT-Charlie	88	252	(45)	539007
302	27.8	1.0	3.0	chr10	110163459	110163558	(23633864)	C	MER103C	DNA/hAT-Charlie	(198)	99	2	539008
764	24.6	8.9	0.0	chr10	110163682	110163917	(23633505)	+	MER112	DNA/hAT-Charlie	3	261	(0)	539009
24	15.8	0.0	0.0	chr10	110345864	110345905	(23451517)	+	(CT)n	Simple_repeat	1	42	(0)	539303
251	24.7	4.5	5.6	chr10	110345920	110346009	(23451413)	C	LTR51	LTR/ERV1	(14)	657	569	539304
27	8.6	0.0	0.0	chr10	110388304	110388340	(23409082)	+	(TC)n	Simple_repeat	1	37	(0)	539393
31	0.0	3.3	0.0	chr10	110459667	110459696	(23337726)	+	(AG)n	Simple_repeat	1	31	(0)	539558
1774	19.9	6.4	2.0	chr10	110459697	110459972	(23337450)	+	MLT1C	LTR/ERVL-MaLR	184	466	(1)	539556
17	29.2	1.9	0.0	chr10	110620397	110620450	(23176972)	+	(CA)n	Simple_repeat	1	55	(0)	539872
727	25.7	3.0	2.6	chr10	110620466	110620704	(23176718)	C	MIRb	SINE/MIR	(6)	262	21	539873
422	26.2	9.2	5.6	chr10	110629579	110629756	(23167666)	+	MIRb	SINE/MIR	14	198	(70)	539895
338	29.7	1.8	1.2	chr10	110635081	110635247	(23162175)	+	L1MD	LINE/L1	4441	4608	(1538)	539910
1173	13.9	0.0	0.0	chr10	110635252	110635417	(23162005)	C	AluSz6	SINE/Alu	(18)	294	129	539911
4797	21.9	8.6	4.6	chr10	110664781	110664886	(23132536)	+	L1MC5a	LINE/L1	1691	1825	(952)	539951
1726	17.0	0.7	0.7	chr10	110664887	110665174	(23132248)	C	AluJr	SINE/Alu	(24)	288	1	539954
4797	23.1	9.2	4.8	chr10	110665175	110665631	(23131791)	+	L1MC5a	LINE/L1	1826	2050	(727)	539951
2073	15.0	0.0	1.0	chr10	110666361	110666667	(23130755)	+	AluJr	SINE/Alu	1	304	(8)	539961
265	32.5	1.2	0.0	chr10	110666668	110666747	(23130675)	C	MIRb	SINE/MIR	(173)	95	15	539962
33	5.6	0.0	0.0	chr10	110748666	110748702	(23048720)	+	(TC)n	Simple_repeat	1	37	(0)	540086
852	21.1	8.5	4.7	chr10	110748715	110748928	(23048494)	C	L1MB5	LINE/L1	(17)	6157	5935	540087
16	14.2	0.0	0.0	chr10	110851435	110851465	(22945957)	+	(AGAGAG)n	Simple_repeat	1	31	(0)	540267
576	17.4	18.0	0.0	chr10	110851494	110851625	(22945797)	+	MER58B	DNA/hAT-Charlie	1	161	(180)	540268
240	29.5	1.3	1.3	chr10	110916520	110916598	(22880824)	C	AmnSINE1	SINE/5S-Deu-L2	(181)	394	316	540368
30	19.3	3.5	2.2	chr10	110919488	110919573	(22877849)	+	G-rich	Low_complexity	1	89	(0)	540372
24	9.6	0.0	6.0	chr10	110919593	110919642	(22877780)	+	GA-rich	Low_complexity	1	50	(0)	540373
1555	16.5	2.7	8.8	chr10	111119189	111119507	(22677915)	+	MLT2D	LTR/ERVL	1	299	(115)	540628
50	0.0	0.0	0.0	chr10	111119517	111119559	(22677863)	+	(CT)n	Simple_repeat	1	43	(0)	540629
253	25.4	10.1	0.0	chr10	112095237	112095307	(21702115)	+	L2c	LINE/L2	3129	3207	(180)	542140
43	4.2	2.0	0.0	chr10	112095417	112095465	(21701957)	+	(TC)n	Simple_repeat	1	50	(0)	542141
262	32.7	5.1	0.0	chr10	112095477	112095626	(21701796)	C	L1ME4b	LINE/L1	(235)	657	500	542142
842	8.6	7.9	0.0	chr10	112518220	112518347	(21279075)	C	MER85	DNA/PiggyBac	(0)	139	1	542806
304	36.0	3.8	3.8	chr10	112518348	112518413	(21279009)	C	L2	LINE/L2	(1531)	1888	1825	542804
751	17.7	0.0	0.9	chr10	112518428	112518540	(21278882)	+	AluJo	SINE/Alu	2	113	(199)	542807
52	2.1	0.0	0.0	chr10	112518542	112518590	(21278832)	+	(TC)n	Simple_repeat	1	49	(0)	542808
42	20.0	0.0	0.0	chr10	112518591	112518669	(21278753)	+	(AT)n	Simple_repeat	1	79	(0)	542809
24	8.9	2.8	0.0	chr10	112621990	112622025	(21175397)	+	(GA)n	Simple_repeat	1	37	(0)	542948
20	0.0	0.0	0.0	chr10	112799925	112799946	(20997476)	+	(AG)n	Simple_repeat	1	22	(0)	543226
536	29.5	13.8	5.5	chr10	112799965	112800474	(20996948)	C	L4_A_Mam	LINE/RTE-X	(3222)	1768	1210	543227
16	35.7	0.0	0.0	chr10	112950432	112950491	(20846931)	+	(TT)n	Simple_repeat	1	60	(0)	543548
18	14.7	0.0	4.7	chr10	112950556	112950598	(20846824)	+	(CTCCC)n	Simple_repeat	1	43	(0)	543549
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
206	31.0	2.9	6.5	chr10	113048296	113048402	(20749020)	+	L2c	LINE/L2	3230	3332	(55)	543709
27	0.0	0.0	0.0	chr10	113073100	113073129	(20724293)	+	(GT)n	Simple_repeat	1	30	(0)	543740
38	4.9	0.0	0.0	chr10	113073130	113073171	(20724251)	+	(GA)n	Simple_repeat	1	42	(0)	543741
105	1.0	1.0	0.0	chr10	113117366	113117462	(20679960)	+	(TC)n	Simple_repeat	1	98	(0)	543808
83	8.7	4.4	3.0	chr10	113257214	113257371	(20540051)	+	(TTTC)n	Simple_repeat	1	165	(0)	544000
2140	10.8	2.6	13.3	chr10	113263054	113263481	(20533941)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	544010
33	0.0	0.0	0.0	chr10	113346079	113346106	(20451316)	+	(CT)n	Simple_repeat	1	28	(0)	544165
244	25.0	1.8	0.0	chr10	113600098	113600153	(20197269)	C	MIRb	SINE/MIR	(56)	212	156	544588
38	0.0	0.0	0.0	chr10	113600156	113600188	(20197234)	+	(TC)n	Simple_repeat	1	33	(0)	544589
1764	15.9	0.7	3.1	chr10	113600190	113600478	(20196944)	C	AluJb	SINE/Alu	(30)	282	1	544590
54	7.7	0.0	0.0	chr10	114704235	114704303	(19093119)	+	(TC)n	Simple_repeat	1	69	(0)	546373
29	0.0	0.0	0.0	chr10	114704304	114704335	(19093087)	+	(AT)n	Simple_repeat	1	32	(0)	546374
537	30.2	9.7	8.9	chr10	114761799	114761983	(19035439)	+	L2c	LINE/L2	3047	3226	(161)	546479
37	7.0	0.0	0.0	chr10	114761984	114762028	(19035394)	+	(CT)n	Simple_repeat	1	45	(0)	546480
537	30.2	9.7	8.9	chr10	114762029	114762042	(19035380)	+	L2c	LINE/L2	3227	3234	(153)	546479
2403	9.3	0.3	0.3	chr10	114762043	114762332	(19035090)	C	AluY	SINE/Alu	(21)	290	1	546481
31	20.9	6.1	0.0	chr10	114927037	114927118	(18870304)	+	GA-rich	Low_complexity	1	87	(0)	546785
50	2.2	0.0	0.0	chr10	114927122	114927168	(18870254)	+	(GA)n	Simple_repeat	1	47	(0)	546786
592	20.4	10.8	0.0	chr10	115143486	115143617	(18653805)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	227	547128
23	19.9	2.9	2.9	chr10	115143680	115143747	(18653675)	+	GA-rich	Low_complexity	1	70	(0)	547129
950	21.4	1.6	0.6	chr10	115143779	115143961	(18653461)	C	MLT1A	LTR/ERVL-MaLR	(186)	188	4	547128
1747	32.9	18.1	4.8	chr10	115440407	115442247	(18355175)	+	L2a	LINE/L2	898	3017	(409)	547446
40	0.0	0.0	0.0	chr10	115442271	115442304	(18355118)	+	(CT)n	Simple_repeat	1	34	(0)	547447
18	8.1	0.0	0.0	chr10	115442305	115442322	(18355100)	+	(TG)n	Simple_repeat	1	18	(0)	547448
2011	11.1	7.1	1.4	chr10	115696702	115696865	(18100557)	C	THE1D	LTR/ERVL-MaLR	(0)	381	214	547761
34	3.0	0.0	0.0	chr10	115696866	115696899	(18100523)	+	(AG)n	Simple_repeat	1	34	(0)	547762
2011	11.1	7.1	1.4	chr10	115696900	115697091	(18100331)	C	THE1D	LTR/ERVL-MaLR	(168)	213	4	547761
44	0.0	2.4	0.0	chr10	115940673	115940713	(17856709)	+	(CT)n	Simple_repeat	1	42	(0)	548094
34	6.8	0.0	0.0	chr10	116273635	116273646	(17523776)	+	(CA)n	Simple_repeat	1	12	(0)	548528
52	2.1	0.0	0.0	chr10	116273647	116273695	(17523727)	+	(CT)n	Simple_repeat	1	49	(0)	548529
34	6.8	0.0	0.0	chr10	116273696	116273729	(17523693)	+	(CA)n	Simple_repeat	1	34	(0)	548530
92	31.2	2.2	0.9	chr10	116289636	116289951	(17507471)	+	(TCTC)n	Simple_repeat	1	323	(0)	548562
36	2.9	0.0	0.0	chr10	116289954	116289988	(17507434)	+	(TC)n	Simple_repeat	1	35	(0)	548563
10798	8.8	4.1	4.6	chr10	116497271	116499033	(17298389)	C	HERV9N-int	LTR/ERV1	(0)	5374	3813	548871
35	10.1	1.9	0.0	chr10	116590487	116590539	(17206883)	+	(GA)n	Simple_repeat	1	54	(0)	549030
160	24.0	1.4	1.8	chr10	116634136	116634564	(17162858)	+	(CT)n	Simple_repeat	1	435	(0)	549111
198	22.6	12.3	7.0	chr10	117148345	117148444	(16648978)	C	MIR1_Amn	SINE/MIR	(0)	230	125	549954
420	28.2	1.7	0.0	chr10	117148484	117148600	(16648822)	+	Eulor2C	DNA?	2	120	(49)	549955
67	9.9	0.0	3.5	chr10	117191924	117192039	(16605383)	+	(AGAGAG)n	Simple_repeat	1	116	(0)	550037
54	22.3	0.0	2.3	chr10	117526543	117526672	(16270750)	+	(TA)n	Simple_repeat	1	130	(0)	550634
36	0.0	0.0	0.0	chr10	117526673	117526703	(16270719)	+	(AG)n	Simple_repeat	1	31	(0)	550635
516	26.3	6.4	1.1	chr10	117526714	117526890	(16270532)	+	L2a	LINE/L2	3235	3421	(5)	550636
65	21.4	0.0	0.0	chr10	117542303	117542494	(16254928)	+	GA-rich	Low_complexity	1	192	(0)	550654
50	14.5	0.0	0.0	chr10	117548492	117548576	(16248846)	+	(GAGA)n	Simple_repeat	1	85	(0)	550661
1011	22.7	6.3	10.5	chr10	117654242	117654659	(16142763)	C	MLT1H2	LTR/ERVL-MaLR	(6)	483	85	550826
43	0.0	0.0	0.0	chr10	117654675	117654711	(16142711)	+	(AG)n	Simple_repeat	1	37	(0)	550827
2273	15.5	5.3	1.2	chr10	117665933	117666139	(16131283)	C	MSTB	LTR/ERVL-MaLR	(10)	416	211	550853
29	0.0	0.0	0.0	chr10	117666140	117666164	(16131258)	+	(AG)n	Simple_repeat	1	25	(0)	550854
2273	15.5	5.3	1.2	chr10	117666165	117666355	(16131067)	C	MSTB	LTR/ERVL-MaLR	(216)	210	1	550853
42	9.1	0.0	0.0	chr10	117866273	117866331	(15931091)	+	(AG)n	Simple_repeat	1	59	(0)	551201
278	19.7	5.4	15.3	chr10	117866355	117866498	(15930924)	+	HAL1b	LINE/L1	2275	2403	(18)	551202
1421	22.6	4.3	6.5	chr10	117940746	117940921	(15856501)	+	MLT1A	LTR/ERVL-MaLR	1	172	(202)	551330
60	6.0	2.2	2.2	chr10	117940922	117941011	(15856411)	+	(CT)n	Simple_repeat	1	92	(0)	551331
1421	22.6	4.3	6.5	chr10	117941012	117941217	(15856205)	+	MLT1A	LTR/ERVL-MaLR	173	373	(1)	551330
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
47	0.0	0.0	0.0	chr10	118235797	118235836	(15561586)	+	(TC)n	Simple_repeat	1	40	(0)	551745
34	7.4	0.0	0.0	chr10	118530767	118530809	(15266613)	+	(CT)n	Simple_repeat	1	43	(0)	552200
317	34.1	5.1	7.8	chr10	118726363	118726683	(15070739)	C	L2c	LINE/L2	(3)	3384	3073	552490
15	7.0	6.7	0.0	chr10	119030612	119030641	(14766781)	+	(CCGC)n	Simple_repeat	1	32	(0)	553074
15	3.3	5.4	7.7	chr10	119030642	119030647	(14766775)	+	(GCC)n	Simple_repeat	2	39	(0)	553075
15	18.9	0.0	8.8	chr10	119104378	119104434	(14692988)	+	(CCCG)n	Simple_repeat	1	57	(0)	553223
36	0.0	0.0	0.0	chr10	119330381	119330411	(14467011)	+	(GA)n	Simple_repeat	1	31	(0)	553708
1616	20.2	4.7	2.8	chr10	119330412	119330568	(14466854)	C	MLT1A0	LTR/ERVL-MaLR	(204)	161	3	553707
17	3.8	0.0	6.5	chr10	119335096	119335126	(14462296)	+	(TGCC)n	Simple_repeat	1	31	(0)	553715
56	5.2	0.0	0.0	chr10	119335130	119335190	(14462232)	+	(CT)n	Simple_repeat	1	61	(0)	553716
17	9.9	0.0	5.4	chr10	119335202	119335238	(14462184)	+	(TCTT)n	Simple_repeat	1	37	(0)	553717
37	23.4	1.0	1.9	chr10	119542653	119542755	(14254667)	+	GA-rich	Low_complexity	1	104	(0)	554096
289	7.2	6.8	0.0	chr10	119625135	119625675	(14171747)	+	(TA)n	Simple_repeat	1	578	(0)	554256
26	6.3	0.0	0.0	chr10	119625676	119625709	(14171713)	+	(GA)n	Simple_repeat	1	34	(0)	554257
1930	19.5	17.7	0.2	chr10	119625872	119626323	(14171099)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	554258
194	25.5	0.0	0.0	chr10	119725071	119725121	(14072301)	C	MIR3	SINE/MIR	(96)	112	62	554473
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
2112	7.2	0.0	1.6	chr10	119785287	119785535	(14011887)	C	AluSc8	SINE/Alu	(13)	298	54	554598
51	0.0	0.0	0.0	chr10	119785536	119785579	(14011843)	+	(GA)n	Simple_repeat	1	44	(0)	554599
1929	15.8	0.0	1.8	chr10	119785594	119785878	(14011544)	+	AluJr	SINE/Alu	21	300	(12)	554600
56	11.6	0.0	0.0	chr10	120399710	120399796	(13397626)	+	(AGAGAG)n	Simple_repeat	1	87	(0)	555588
1822	19.5	1.3	4.2	chr10	120400442	120400637	(13396785)	+	MLT1A	LTR/ERVL-MaLR	1	187	(187)	555589
40	2.2	4.3	0.0	chr10	120400638	120400683	(13396739)	+	(CT)n	Simple_repeat	1	48	(0)	555590
1822	19.5	1.3	4.2	chr10	120400684	120400871	(13396551)	+	MLT1A	LTR/ERVL-MaLR	188	374	(0)	555589
72	0.0	0.0	0.0	chr10	120537993	120538053	(13259369)	+	(TC)n	Simple_repeat	1	61	(0)	555811
4714	16.7	2.7	3.0	chr10	120559565	120560422	(13237000)	+	Tigger2	DNA/TcMar-Tigger	1	855	(1863)	555846
340	33.1	4.0	4.6	chr10	120978384	120978557	(12818865)	C	MER131	DNA?	(41)	174	2	556457
2431	5.9	0.0	0.3	chr10	121398005	121398292	(12399130)	+	AluY	SINE/Alu	1	287	(24)	557092
44	0.0	0.0	0.0	chr10	121398294	121398331	(12399091)	+	(AG)n	Simple_repeat	1	38	(0)	557093
6654	18.3	4.2	2.5	chr10	121398332	121398569	(12398853)	+	L1MEc	LINE/L1	3392	3642	(2677)	557086
22	3.9	0.0	0.0	chr10	121525621	121525647	(12271775)	+	(GA)n	Simple_repeat	1	27	(0)	557286
44	0.0	0.0	0.0	chr10	121556397	121556434	(12240988)	+	(CT)n	Simple_repeat	1	38	(0)	557323
427	23.8	13.1	3.7	chr10	121556476	121556669	(12240753)	C	MIR3	SINE/MIR	(0)	208	4	557324
17	0.0	0.0	0.0	chr10	121577160	121577178	(12220244)	+	(TA)n	Simple_repeat	1	19	(0)	557355
34	0.0	0.0	0.0	chr10	121577179	121577207	(12220215)	+	(AG)n	Simple_repeat	1	29	(0)	557356
223	27.0	0.0	3.1	chr10	121577211	121577275	(12220147)	+	MIRb	SINE/MIR	46	108	(160)	557357
210	26.7	0.0	0.0	chr10	121577295	121577339	(12220083)	+	MIRb	SINE/MIR	189	233	(35)	557357
23	20.9	0.0	0.0	chr10	121590960	121591010	(12206412)	+	(CACG)n	Simple_repeat	1	51	(0)	557375
20	0.0	0.0	0.0	chr10	121591012	121591033	(12206389)	+	(CT)n	Simple_repeat	1	22	(0)	557376
29	25.2	0.9	5.4	chr10	121598376	121598485	(12198937)	+	(GCC)n	Simple_repeat	1	111	(0)	557380
17	16.2	2.7	2.6	chr10	121668744	121668780	(12128642)	+	GA-rich	Low_complexity	1	38	(0)	557520
89	13.2	0.7	0.7	chr10	122634341	122634488	(11162934)	+	(TTTC)n	Simple_repeat	1	149	(0)	559118
2303	11.8	0.0	0.0	chr10	122634489	122634793	(11162629)	C	AluSx	SINE/Alu	(4)	308	4	559119
16	8.2	0.0	0.0	chr10	123884675	123884700	(9912722)	+	(AATC)n	Simple_repeat	1	26	(0)	561048
38	6.9	0.0	0.0	chr10	123884715	123884760	(9912662)	+	(TC)n	Simple_repeat	1	46	(0)	561049
14	28.2	0.0	2.0	chr10	124389308	124389357	(9408065)	+	(CCCGCG)n	Simple_repeat	1	50	(0)	561813
16	15.4	2.8	0.0	chr10	124461792	124461827	(9335595)	+	(GCGCCG)n	Simple_repeat	1	37	(0)	561977
19	10.4	4.7	2.2	chr10	124462052	124462094	(9335328)	+	G-rich	Low_complexity	1	45	(0)	561978
1624	22.6	11.5	3.7	chr10	124952124	124952586	(8844836)	+	MLT1D	LTR/ERVL-MaLR	2	505	(0)	562835
141	3.6	0.0	0.0	chr10	125098658	125098799	(8698623)	+	(GA)n	Simple_repeat	1	142	(0)	562989
12	4.3	8.3	0.0	chr10	125161036	125161059	(8636363)	+	(TCGC)n	Simple_repeat	1	26	(0)	563053
27	6.1	0.0	0.0	chr10	125470221	125470255	(8327167)	+	(GA)n	Simple_repeat	1	35	(0)	563572
280	23.9	12.4	4.9	chr10	125633499	125633661	(8163761)	C	L1ME4c	LINE/L1	(39)	791	615	563809
364	26.4	7.6	2.4	chr10	125695604	125695727	(8101695)	+	MLT1K	LTR/ERVL-MaLR	173	303	(292)	563881
1380	18.5	15.0	5.3	chr10	125708632	125709270	(8088152)	+	LTR48	LTR/ERV1	1	644	(0)	563903
377	23.9	6.6	1.3	chr10	125768212	125768349	(8029073)	C	MIR1_Amn	SINE/MIR	(39)	169	30	563979
2071	10.6	2.9	0.0	chr10	126190991	126191293	(7606129)	C	AluSz6	SINE/Alu	(0)	312	1	564538
305	29.8	9.6	3.6	chr10	126191295	126191569	(7605853)	C	L2c	LINE/L2	(556)	2863	2571	564534
194	33.1	13.4	0.0	chr10	126249896	126249981	(7547441)	+	L2c	LINE/L2	3246	3349	(38)	564610
12	18.2	0.0	0.0	chr10	126508143	126508158	(7289264)	+	(GAGT)n	Simple_repeat	1	16	(0)	564926
38	0.0	0.0	0.0	chr10	126508159	126508191	(7289231)	+	(GA)n	Simple_repeat	1	33	(0)	564927
16	8.9	0.0	0.0	chr10	126508192	126508206	(7289216)	+	(TG)n	Simple_repeat	2	16	(0)	564928
320	27.4	2.5	5.7	chr10	126508214	126508337	(7289085)	+	MER5A	DNA/hAT-Charlie	50	169	(20)	564929
60	3.4	0.0	0.0	chr10	126649013	126649072	(7148350)	+	(TC)n	Simple_repeat	1	60	(0)	565127
23	9.8	0.0	0.0	chr10	126743012	126743044	(7054378)	+	(CT)n	Simple_repeat	1	33	(0)	565260
1116	11.4	11.4	2.4	chr10	127281930	127282136	(6515286)	C	MER30	DNA/hAT-Charlie	(2)	228	1	565983
54	8.0	1.2	1.2	chr10	127282206	127282286	(6515136)	+	(TC)n	Simple_repeat	1	82	(0)	565984
5330	19.6	4.7	1.2	chr10	127868729	127870955	(5926467)	C	L1PBa	LINE/L1	(3567)	3348	1023	566744
54	0.0	0.0	0.0	chr10	127870956	127871001	(5926421)	+	(TC)n	Simple_repeat	1	46	(0)	566745
65	1.7	0.0	0.0	chr10	128239620	128239679	(5557743)	+	(TC)n	Simple_repeat	1	60	(0)	567205
343	24.5	5.8	1.0	chr10	128732591	128732689	(5064733)	+	L1MCa	LINE/L1	1901	2004	(4504)	567751
27	10.3	0.0	0.0	chr10	128732692	128732734	(5064688)	+	(AGAGAG)n	Simple_repeat	1	43	(0)	567752
41	20.1	1.2	0.0	chr10	128735248	128735332	(5062090)	+	GA-rich	Low_complexity	1	86	(0)	567753
30	8.1	0.0	0.0	chr10	129034568	129034607	(4762815)	+	(AG)n	Simple_repeat	1	40	(0)	568071
345	21.3	4.6	14.9	chr10	129134456	129134676	(4662746)	+	UCON12	Unknown	319	515	(5)	568175
35	0.0	0.0	0.0	chr10	129134711	129134740	(4662682)	+	(AG)n	Simple_repeat	1	30	(0)	568176
379	23.1	5.2	0.0	chr10	129446039	129446129	(4351293)	+	Tigger14a	DNA/TcMar-Tigger	128	223	(101)	568514
16	16.1	0.0	0.0	chr10	129446151	129446178	(4351244)	+	A-rich	Low_complexity	1	28	(0)	568515
27	7.9	2.3	2.3	chr10	129446220	129446276	(4351146)	+	(AG)n	Simple_repeat	1	57	(0)	568516
32	18.5	5.2	3.0	chr10	130194474	130194582	(3602840)	+	GA-rich	Low_complexity	1	111	(0)	569241
646	23.1	4.0	1.2	chr10	132172754	132172924	(1624498)	C	L1MC4a	LINE/L1	(1069)	6813	6638	571394
136	22.1	0.7	0.3	chr10	132172936	132173222	(1624200)	+	(TCTC)n	Simple_repeat	1	289	(0)	571396
3047	7.7	3.7	0.0	chr10	132335634	132336072	(1461350)	C	LTR71B	LTR/ERV1	(154)	456	1	571549
714	22.4	11.9	1.4	chr10	132886660	132886944	(910478)	+	LTR35	LTR/ERV1	52	425	(183)	572017
498	5.8	14.4	0.2	chr10	132886976	132888069	(909353)	+	(TC)n	Simple_repeat	1	1252	(0)	572018
216	4.4	11.5	0.7	chr10	132912141	132912635	(884787)	+	(TC)n	Simple_repeat	1	552	(0)	572041
195	27.7	1.1	1.0	chr10	133250213	133250782	(546640)	+	GA-rich	Low_complexity	1	576	(0)	572310
230	34.9	5.6	0.0	chr11	1356141	1356292	(133730330)	C	L1M1	LINE/L1	(1451)	4695	4535	574523
472	28.3	10.4	7.5	chr11	1357004	1357328	(133729294)	C	L1M5	LINE/L1	(1633)	4513	4150	574524
3207	20.7	7.5	5.5	chr11	2336261	2337444	(132749178)	+	HERVIP10FH-int	LTR/ERV1	2	1112	(3990)	575696
48	0.0	0.0	0.0	chr11	2733775	2733815	(132352807)	+	(CA)n	Simple_repeat	1	41	(0)	576095
36	2.4	0.0	0.0	chr11	2733816	2733857	(132352765)	+	(TC)n	Simple_repeat	1	42	(0)	576096
112	8.1	1.7	2.2	chr11	3216843	3217021	(131869601)	+	(TTCT)n	Simple_repeat	1	182	(0)	576734
59	4.8	0.0	0.0	chr11	3217022	3217085	(131869537)	+	(TC)n	Simple_repeat	1	64	(0)	576735
15	24.8	3.4	1.6	chr11	3217200	3217258	(131869364)	+	GA-rich	Low_complexity	1	61	(0)	576736
29	19.0	0.0	0.0	chr11	3443569	3443622	(131643000)	+	GA-rich	Low_complexity	1	54	(0)	577042
69	17.0	2.3	0.0	chr11	4673484	4673569	(130413053)	+	GA-rich	Low_complexity	25	136	(0)	579056
48	4.2	0.0	0.0	chr11	4795822	4795871	(130290751)	+	(GA)n	Simple_repeat	1	50	(0)	579237
207	31.4	0.0	0.0	chr11	4986840	4986890	(130099732)	C	MIRc	SINE/MIR	(180)	88	38	579473
73	2.9	0.0	0.0	chr11	4986906	4986976	(130099646)	+	(TC)n	Simple_repeat	1	71	(0)	579474
357	10.4	0.0	0.0	chr11	4986977	4987024	(130099598)	C	AluSp	SINE/Alu	(18)	295	248	579475
56	0.0	0.0	0.0	chr11	6259502	6259549	(128827073)	+	(TC)n	Simple_repeat	1	48	(0)	581035
1305	36.3	6.2	6.1	chr11	6261780	6262686	(128823936)	C	L2b	LINE/L2	(616)	2803	1871	581039
46	0.0	0.0	0.0	chr11	6262687	6262725	(128823897)	+	(AG)n	Simple_repeat	1	39	(0)	581042
1305	36.3	6.2	6.1	chr11	6262726	6262980	(128823642)	C	L2b	LINE/L2	(1549)	1870	1640	581039
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
45	2.4	0.0	0.0	chr11	7224610	7224652	(127861970)	+	(AG)n	Simple_repeat	1	43	(0)	582395
24	0.0	0.0	0.0	chr11	7297060	7297085	(127789537)	+	(GT)n	Simple_repeat	1	26	(0)	582501
44	2.4	0.0	0.0	chr11	7297086	7297127	(127789495)	+	(GA)n	Simple_repeat	1	42	(0)	582502
616	19.0	20.2	0.4	chr11	7297244	7297497	(127789125)	C	L1MC5	LINE/L1	(0)	9304	8988	582503
1883	20.7	5.5	5.7	chr11	8605778	8606321	(126480301)	C	MER44B	DNA/TcMar-Tigger	(0)	550	8	584214
43	6.3	0.0	0.0	chr11	8606341	8606390	(126480232)	+	(CT)n	Simple_repeat	1	50	(0)	584215
386	31.4	9.1	0.3	chr11	8739296	8739498	(126347124)	+	MIRc	SINE/MIR	24	253	(15)	584414
111	3.7	0.0	0.0	chr11	9675310	9675421	(125411201)	+	(AG)n	Simple_repeat	1	112	(0)	586326
19	10.8	2.3	4.4	chr11	9675422	9675465	(125411157)	+	GA-rich	Low_complexity	1	45	(0)	586327
588	29.4	5.1	1.3	chr11	10186975	10187213	(124899409)	+	MLT1J2	LTR/ERVL-MaLR	1	248	(196)	587155
40	3.9	5.6	0.0	chr11	10187271	10187324	(124899298)	+	(CT)n	Simple_repeat	1	57	(0)	587156
707	23.5	13.0	3.8	chr11	10187414	10187678	(124898944)	+	LTR36	LTR/ERV1	319	611	(0)	587157
60	1.8	0.0	0.0	chr11	10310626	10310681	(124775941)	+	(AG)n	Simple_repeat	1	56	(0)	587347
16426	15.5	3.0	2.6	chr11	10431635	10435599	(124651023)	+	L1MB7	LINE/L1	2185	6165	(19)	587549
41	4.8	0.0	0.0	chr11	11036896	11036939	(124049683)	+	(GA)n	Simple_repeat	1	44	(0)	588571
771	28.8	8.4	0.4	chr11	11245973	11246213	(123840409)	C	MIR	SINE/MIR	(0)	262	1	588884
17	15.6	0.0	0.0	chr11	11247230	11247258	(123839364)	+	(CA)n	Simple_repeat	1	29	(0)	588887
400	30.3	10.2	2.8	chr11	11247299	11247515	(123839107)	C	MIRc	SINE/MIR	(29)	239	5	588888
2068	9.5	14.7	0.6	chr11	11383661	11383816	(123702806)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	589100
42	4.6	0.0	0.0	chr11	11383817	11383861	(123702761)	+	(CT)n	Simple_repeat	1	45	(0)	589101
2068	9.5	14.7	0.6	chr11	11383862	11384031	(123702591)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	589100
59	3.5	0.0	0.0	chr11	11638599	11638657	(123447965)	+	(CT)n	Simple_repeat	1	59	(0)	589512
28	0.0	5.3	0.0	chr11	11638658	11638689	(123447933)	+	(CA)n	Simple_repeat	1	33	(0)	589513
246	34.5	12.8	0.0	chr11	11638701	11638816	(123447806)	+	MIRc	SINE/MIR	17	149	(119)	589514
227	23.9	14.1	5.4	chr11	11877478	11877716	(123208906)	+	L1ME4a	LINE/L1	5628	5890	(234)	589889
33	5.1	0.0	0.0	chr11	11877765	11877805	(123208817)	+	(CT)n	Simple_repeat	1	41	(0)	589890
63	0.0	0.0	0.0	chr11	11877806	11877859	(123208763)	+	(TG)n	Simple_repeat	1	54	(0)	589891
273	28.1	6.8	0.0	chr11	11877881	11877976	(123208646)	+	L1ME4a	LINE/L1	5977	6079	(45)	589889
85	8.3	0.0	0.0	chr11	12330787	12330901	(122755721)	+	(GA)n	Simple_repeat	1	115	(0)	590625
46	5.3	0.0	1.6	chr11	12330901	12330961	(122755661)	+	(GT)n	Simple_repeat	1	61	(0)	590626
19	8.8	2.6	2.6	chr11	12674114	12674151	(122412471)	+	(CCGCC)n	Simple_repeat	1	39	(0)	591159
23	10.0	6.5	2.0	chr11	12694273	12694318	(122392304)	+	GA-rich	Low_complexity	1	49	(0)	591179
2479	10.1	0.3	0.0	chr11	12989101	12989406	(122097216)	+	AluSx1	SINE/Alu	1	307	(5)	591627
1954	13.4	7.6	4.1	chr11	12989407	12989730	(122096892)	C	THE1D	LTR/ERVL-MaLR	(39)	342	1	591626
17	4.3	0.0	0.0	chr11	13668730	13668753	(121417869)	+	(GCG)n	Simple_repeat	1	24	(0)	592646
25	9.4	0.0	0.0	chr11	13873942	13873976	(121212646)	+	(TG)n	Simple_repeat	1	35	(0)	592957
47	0.0	0.0	0.0	chr11	13873977	13874016	(121212606)	+	(GA)n	Simple_repeat	1	40	(0)	592958
45	2.4	0.0	0.0	chr11	14352757	14352799	(120733823)	+	(AG)n	Simple_repeat	1	43	(0)	593736
2358	9.8	0.3	1.4	chr11	14352802	14353097	(120733525)	C	AluSx1	SINE/Alu	(18)	294	2	593737
57	0.0	0.0	0.0	chr11	14593614	14593662	(120492960)	+	(GA)n	Simple_repeat	1	49	(0)	594235
36	0.0	0.0	0.0	chr11	14638507	14638545	(120448077)	+	(CT)n	Simple_repeat	1	39	(0)	594290
48	0.0	0.0	0.0	chr11	14638546	14638586	(120448036)	+	(TA)n	Simple_repeat	1	41	(0)	594291
14	0.0	8.3	0.0	chr11	14688074	14688097	(120398525)	+	(TTTC)n	Simple_repeat	1	26	(0)	594360
65	9.4	1.9	0.9	chr11	14688098	14688204	(120398418)	+	(TC)n	Simple_repeat	1	109	(0)	594361
12	20.8	6.8	0.0	chr11	14891919	14891962	(120194660)	+	(GGCCC)n	Simple_repeat	1	47	(0)	594638
57	24.9	3.1	6.1	chr11	15558846	15559101	(119527521)	+	GA-rich	Low_complexity	1	264	(0)	595702
19	6.0	2.6	5.0	chr11	16120051	16120089	(118966533)	+	(TTTG)n	Simple_repeat	1	40	(0)	596607
89	15.5	5.5	1.4	chr11	16120103	16120304	(118966318)	+	(TC)n	Simple_repeat	1	213	(0)	596608
629	24.6	12.0	2.0	chr11	16177356	16177621	(118909001)	C	MER113	DNA/hAT-Charlie	(21)	500	190	596684
46	0.0	2.1	2.1	chr11	16177622	16177668	(118908954)	+	(TC)n	Simple_repeat	1	48	(0)	596685
629	26.2	13.1	3.1	chr11	16177669	16177764	(118908858)	C	MER113	DNA/hAT-Charlie	(310)	211	111	596684
13	30.3	4.0	1.3	chr11	16607821	16607894	(118478728)	+	(CAGG)n	Simple_repeat	1	77	(0)	597238
3909	14.8	4.0	0.9	chr11	16720947	16721616	(118365006)	+	MER41-int	LTR/ERV1	1	638	(5308)	597362
237	20.7	0.0	3.3	chr11	16936949	16937008	(118149614)	+	MIRc	SINE/MIR	81	138	(130)	597732
30	0.0	0.0	0.0	chr11	16982781	16982806	(118103816)	+	(AC)n	Simple_repeat	1	26	(0)	597822
31	7.6	0.0	0.0	chr11	16982808	16982849	(118103773)	+	(GA)n	Simple_repeat	1	42	(0)	597823
268	32.5	11.0	1.2	chr11	16982855	16983046	(118103576)	+	L2c	LINE/L2	2968	3176	(199)	597824
996	19.3	4.9	0.9	chr11	17830363	17830601	(117256021)	C	MSTD	LTR/ERVL-MaLR	(0)	465	194	599388
64	8.8	0.0	0.0	chr11	17830602	17830688	(117255934)	+	(GA)n	Simple_repeat	1	87	(0)	599389
616	17.8	9.2	0.0	chr11	17830730	17830858	(117255764)	C	MSTD	LTR/ERVL-MaLR	(286)	142	1	599388
188	17.6	8.9	10.5	chr11	19520296	19520352	(115566270)	C	OldhAT1	DNA/hAT-Ac	(2042)	806	751	602352
252	34.2	3.3	2.5	chr11	19785163	19785282	(115301340)	C	MIR3	SINE/MIR	(7)	201	81	602865
47	2.3	0.0	0.0	chr11	20504708	20504752	(114581870)	+	(GA)n	Simple_repeat	1	45	(0)	604028
1964	14.0	0.4	0.0	chr11	20504754	20505032	(114581590)	C	AluSz6	SINE/Alu	(32)	280	1	604029
42	0.0	0.0	0.0	chr11	22182454	22182489	(112904133)	+	(TC)n	Simple_repeat	1	36	(0)	606560
16	19.9	2.4	0.0	chr11	22182594	22182634	(112903988)	+	(TATAA)n	Simple_repeat	1	42	(0)	606561
1569	27.2	7.0	5.0	chr11	22311191	22311996	(112774626)	+	L1M5	LINE/L1	4372	5195	(951)	606739
55	12.1	4.0	0.9	chr11	22312003	22312103	(112774519)	+	GA-rich	Low_complexity	1	105	(0)	606742
311	24.9	1.0	1.0	chr11	22312104	22312201	(112774421)	C	MLT2B2	LTR/ERVL	(20)	534	434	606743
307	29.8	7.7	1.4	chr11	22312210	22312383	(112774239)	C	MIRb	SINE/MIR	(70)	198	3	606744
1120	26.0	4.8	5.1	chr11	25457207	25457559	(109629063)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	11	611106
46	2.3	0.0	0.0	chr11	25457566	25457609	(109629013)	+	(GA)n	Simple_repeat	1	44	(0)	611107
1450	12.0	1.8	2.2	chr11	25457618	25457842	(109628780)	C	AluSx1	SINE/Alu	(11)	301	78	611108
14639	14.0	2.1	0.6	chr11	27085219	27085555	(108001067)	+	Tigger1	DNA/TcMar-Tigger	1	347	(2071)	613393
48	0.0	0.0	0.0	chr11	27085556	27085596	(108001026)	+	(TC)n	Simple_repeat	1	41	(0)	613394
14639	14.0	2.1	0.6	chr11	27085597	27087636	(107998986)	+	Tigger1	DNA/TcMar-Tigger	348	2416	(2)	613393
1974	16.6	5.8	0.0	chr11	27232806	27233149	(107853473)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	613629
18	11.7	0.0	0.0	chr11	27233189	27233216	(107853406)	+	(TC)n	Simple_repeat	1	28	(0)	613630
27	0.0	3.5	0.0	chr11	27233217	27233245	(107853377)	+	(TCTTTT)n	Simple_repeat	1	30	(0)	613631
2273	10.9	0.0	0.0	chr11	27233246	27233528	(107853094)	C	AluSq2	SINE/Alu	(30)	283	1	613632
31	0.0	0.0	0.0	chr11	27482163	27482189	(107604433)	+	(CT)n	Simple_repeat	1	27	(0)	614024
138	14.3	0.0	0.0	chr11	29724626	29724851	(105361771)	+	(GAGAGA)n	Simple_repeat	1	226	(0)	617439
1011	16.9	6.7	2.5	chr11	29724852	29725077	(105361545)	C	THE1C	LTR/ERVL-MaLR	(182)	250	1	617440
20	0.0	0.0	0.0	chr11	30241153	30241174	(104845448)	+	(GT)n	Simple_repeat	1	22	(0)	618171
56	0.0	0.0	0.0	chr11	30241175	30241222	(104845400)	+	(GA)n	Simple_repeat	1	48	(0)	618172
204	32.9	5.0	0.0	chr11	30241375	30241450	(104845172)	C	MIRb	SINE/MIR	(173)	95	16	618173
23	21.9	1.5	1.5	chr11	30586282	30586346	(104500276)	+	(GAGC)n	Simple_repeat	1	66	(0)	618704
2918	27.7	5.8	3.2	chr11	31722543	31722660	(103363962)	C	MER45C	DNA/hAT-Tip100	(7)	946	828	620358
68	4.1	1.3	0.0	chr11	31722661	31722735	(103363887)	+	(TC)n	Simple_repeat	1	76	(0)	620359
36	2.9	0.0	0.0	chr11	31797984	31798018	(103288604)	+	(GA)n	Simple_repeat	1	35	(0)	620430
52	2.1	0.0	0.0	chr11	31814991	31815039	(103271583)	+	(TC)n	Simple_repeat	1	49	(0)	620446
66	9.0	0.0	1.0	chr11	32430405	32430500	(102656122)	+	(AG)n	Simple_repeat	1	96	(0)	621581
192	23.2	1.2	2.2	chr11	32503710	32504194	(102582428)	+	A-rich	Low_complexity	3	482	(0)	621733
574	21.1	7.5	0.6	chr11	32890991	32891152	(102195470)	+	UCON64	Unknown	478	651	(0)	622437
11	25.3	0.0	2.5	chr11	32891782	32891821	(102194801)	+	A-rich	Low_complexity	1	40	(0)	622438
31	0.0	0.0	0.0	chr11	35554394	35554420	(99532202)	+	(CT)n	Simple_repeat	1	27	(0)	626931
12	35.1	1.4	1.4	chr11	35663487	35663556	(99423066)	+	GA-rich	Low_complexity	1	71	(0)	627135
51	0.0	0.0	0.0	chr11	36140993	36141036	(98945586)	+	(TC)n	Simple_repeat	1	44	(0)	627933
341	30.1	3.9	3.1	chr11	36141086	36141212	(98945410)	+	MIRc	SINE/MIR	141	268	(0)	627934
38	0.0	0.0	0.0	chr11	36367741	36367773	(98718849)	+	(TC)n	Simple_repeat	1	33	(0)	628336
2401	28.6	8.7	1.8	chr11	36367810	36368480	(98718142)	C	L2	LINE/L2	(2215)	1204	462	628337
57	0.0	0.0	0.0	chr11	38302347	38302395	(96784227)	+	(AG)n	Simple_repeat	1	49	(0)	631010
261	15.0	0.7	5.0	chr11	43631529	43631689	(91454933)	C	HERV17-int	LTR/ERV1	(7761)	865	712	638764
1377	23.8	5.8	11.8	chr11	44014117	44014692	(91071930)	C	MLT1F	LTR/ERVL-MaLR	(6)	542	4	639403
28	14.0	8.7	3.0	chr11	44310180	44310213	(90776409)	+	(CCTCTC)n	Simple_repeat	1	34	(0)	639877
35	16.1	3.5	0.0	chr11	44310214	44310330	(90776292)	+	(CT)n	Simple_repeat	1	121	(0)	639878
28	14.0	8.7	3.0	chr11	44310277	44310333	(90776289)	+	(CCTCTC)n	Simple_repeat	5	67	(0)	639879
53	11.3	0.0	0.0	chr11	45068341	45068426	(90018196)	+	(TC)n	Simple_repeat	1	86	(0)	641434
24	3.5	0.0	0.0	chr11	45068427	45068455	(90018167)	+	(AC)n	Simple_repeat	1	29	(0)	641435
2174	12.3	0.0	0.0	chr11	45068496	45068804	(90017818)	+	AluSx4	SINE/Alu	2	310	(0)	641436
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
19	24.1	0.0	3.5	chr11	46121972	46122029	(88964593)	+	(GCG)n	Simple_repeat	1	58	(0)	643320
13	10.4	4.5	11.6	chr11	46122043	46122108	(88964514)	+	(CCGGCAG)n	Simple_repeat	1	69	(0)	643321
1604	12.6	0.0	6.9	chr11	47214511	47214787	(87871835)	+	AluJo	SINE/Alu	42	299	(13)	645475
2150	10.6	0.3	0.0	chr11	47574573	47574854	(87511768)	+	AluSq2	SINE/Alu	1	283	(30)	646198
2146	12.2	1.7	0.0	chr11	47574933	47575226	(87511396)	+	AluSx	SINE/Alu	1	299	(13)	646199
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
233	23.4	36.1	6.8	chr11	48087672	48087805	(86998817)	+	MIRb	SINE/MIR	28	201	(67)	647543
2265	23.9	7.5	5.5	chr11	48087842	48088549	(86998073)	C	LTR83	LTR/ERVL	(41)	739	17	647544
197	22.1	3.0	0.8	chr11	57231584	57232310	(77854312)	+	(TC)n	Simple_repeat	1	743	(0)	653300
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
59	12.7	2.9	0.9	chr11	57772783	57772887	(77313735)	+	(TC)n	Simple_repeat	1	108	(0)	654444
2293	14.9	1.6	3.4	chr11	59499084	59499203	(75587419)	C	MER39B	LTR/ERV1	(219)	434	309	656840
53	3.8	0.0	0.0	chr11	59499204	59499257	(75587365)	+	(CT)n	Simple_repeat	1	54	(0)	656842
2293	14.9	1.6	3.4	chr11	59499258	59499573	(75587049)	C	MER39B	LTR/ERV1	(345)	308	6	656840
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
661	1.4	0.0	0.0	chr11	59557497	59557569	(75529053)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656962
20	13.3	2.3	2.3	chr11	59557606	59557622	(75529000)	+	(TAA)n	Simple_repeat	1	18	(0)	656963
2303	7.3	0.0	1.1	chr11	59557623	59557909	(75528713)	+	AluSq2	SINE/Alu	3	286	(27)	656964
37	0.0	0.0	0.0	chr11	59754014	59754047	(75332575)	+	(AAAC)n	Simple_repeat	1	34	(0)	657376
23	20.4	6.1	2.3	chr11	60924488	60924569	(74162053)	+	(GCG)n	Simple_repeat	1	87	(0)	659115
68	5.9	1.1	0.0	chr11	61538337	61538425	(73548197)	+	(GA)n	Simple_repeat	1	90	(0)	660376
12	12.0	0.0	6.5	chr11	61538494	61538524	(73548098)	+	GA-rich	Low_complexity	1	31	(0)	660377
81	28.6	2.0	2.3	chr11	61609645	61609939	(73476683)	+	GA-rich	Low_complexity	1	301	(0)	660497
301	27.6	7.2	3.7	chr11	61793081	61793242	(73293380)	+	MIRb	SINE/MIR	15	182	(86)	660848
12	17.5	3.1	0.0	chr11	61827628	61827659	(73258963)	+	(CCCG)n	Simple_repeat	1	33	(0)	660908
36	0.0	0.0	0.0	chr11	61952304	61952334	(73134288)	+	(AG)n	Simple_repeat	1	31	(0)	661159
792	18.3	0.0	0.8	chr11	61952335	61952446	(73134176)	C	FLAM_C	SINE/Alu	(31)	112	1	661160
2286	10.7	0.0	3.5	chr11	61952460	61952776	(73133846)	C	AluSz	SINE/Alu	(6)	306	1	661161
1936	8.1	6.5	0.0	chr11	62653500	62653758	(72432864)	+	AluSx	SINE/Alu	1	277	(35)	662482
91	0.0	0.0	0.0	chr11	62653777	62653853	(72432769)	+	(AG)n	Simple_repeat	1	77	(0)	662483
2914	0.3	0.0	0.0	chr11	62653926	62654236	(72432386)	C	AluYb8	SINE/Alu	(7)	311	1	662484
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
1613	9.9	6.4	8.2	chr11	62924444	62924573	(72162049)	C	AluJb	SINE/Alu	(176)	136	2	663120
254	19.0	3.8	22.7	chr11	62924587	62924629	(72161993)	C	MIR	SINE/MIR	(10)	252	208	663122
47	0.0	0.0	0.0	chr11	62924630	62924669	(72161953)	+	(CT)n	Simple_repeat	1	40	(0)	663123
254	19.0	3.8	22.7	chr11	62924670	62924702	(72161920)	C	MIR	SINE/MIR	(55)	207	185	663122
3263	24.0	7.7	14.7	chr11	63735291	63735539	(71351083)	+	L1MEf	LINE/L1	4362	4608	(1538)	664258
60	0.0	0.0	0.0	chr11	63735551	63735601	(71351021)	+	(TC)n	Simple_repeat	1	51	(0)	664278
1242	22.6	0.0	0.0	chr11	63735608	63735824	(71350798)	C	AluSz	SINE/Alu	(90)	222	6	664279
27	3.5	0.0	0.0	chr11	63916968	63916997	(71169625)	+	(CGG)n	Simple_repeat	1	30	(0)	664646
21	21.1	5.8	3.3	chr11	63917069	63917155	(71169467)	+	(CTCG)n	Simple_repeat	1	92	(0)	664647
24	23.6	3.1	4.0	chr11	64305743	64305838	(70780784)	+	G-rich	Low_complexity	1	99	(0)	665355
255	21.9	5.0	9.4	chr11	64704497	64704602	(70382020)	+	Tigger15a	DNA/TcMar-Tigger	144	244	(471)	666069
19	0.0	0.0	0.0	chr11	64704603	64704623	(70381999)	+	(CA)n	Simple_repeat	1	21	(0)	666070
57	0.0	0.0	0.0	chr11	64704624	64704672	(70381950)	+	(AG)n	Simple_repeat	1	49	(0)	666071
813	27.8	6.5	2.6	chr11	64704673	64704982	(70381640)	+	Tigger15a	DNA/TcMar-Tigger	317	639	(76)	666072
2662	4.2	0.0	0.0	chr11	65333292	65333602	(69753020)	C	AluY	SINE/Alu	(0)	311	1	667346
50	0.0	0.0	0.0	chr11	65337505	65337547	(69749075)	+	(AG)n	Simple_repeat	1	43	(0)	667354
1529	18.7	0.0	9.6	chr11	65337594	65337789	(69748833)	C	AluJo	SINE/Alu	(2)	310	128	667355
513	28.2	14.3	0.6	chr11	65382621	65383056	(69703566)	+	L2b	LINE/L2	2847	3374	(1)	667450
26	9.3	8.8	0.0	chr11	65647810	65647866	(69438756)	+	(CTGTCT)n	Simple_repeat	1	62	(0)	667888
2249	10.3	0.0	0.3	chr11	65647869	65648168	(69438454)	C	AluSq2	SINE/Alu	(10)	303	5	667889
24	0.0	0.0	0.0	chr11	65902336	65902361	(69184261)	+	(TG)n	Simple_repeat	1	26	(0)	668389
36	4.3	4.1	0.0	chr11	65902361	65902409	(69184213)	+	(GA)n	Simple_repeat	1	51	(0)	668390
701	25.1	8.8	3.8	chr11	65902417	65902652	(69183970)	+	MIRb	SINE/MIR	5	253	(15)	668391
228	35.0	8.5	0.0	chr11	66257302	66257398	(68829224)	+	MIR	SINE/MIR	145	250	(12)	669134
13	28.9	0.0	4.7	chr11	66257610	66257673	(68828949)	+	(CCGCCC)n	Simple_repeat	1	64	(0)	669135
1891	18.2	10.6	3.2	chr11	66602140	66602575	(68484047)	C	MLT1F2	LTR/ERVL-MaLR	(3)	557	54	669892
2508	6.7	0.3	0.0	chr11	67094097	67094395	(67992227)	+	AluY	SINE/Alu	2	301	(10)	670938
69	17.4	2.1	5.3	chr11	67094397	67094582	(67992040)	+	GA-rich	Low_complexity	1	190	(0)	670939
2406	7.4	0.0	0.3	chr11	67094614	67094911	(67991711)	+	AluY	SINE/Alu	1	297	(14)	670940
2353	12.3	1.3	0.0	chr11	67169367	67169675	(67916947)	C	AluSq	SINE/Alu	(0)	313	1	671135
2516	10.6	0.0	0.3	chr11	67169701	67169715	(67916907)	C	AluSg	SINE/Alu	(0)	310	296	671136
44	0.0	4.4	0.0	chr11	67169716	67169760	(67916862)	+	(TC)n	Simple_repeat	1	47	(0)	671137
2516	10.6	0.0	0.3	chr11	67169761	67170055	(67916567)	C	AluSg	SINE/Alu	(15)	295	1	671136
21	5.1	0.0	10.0	chr11	67420853	67420902	(67665720)	+	(GGCCGG)n	Simple_repeat	1	50	(0)	671610
2468	10.3	0.0	0.0	chr11	67687752	67688063	(67398559)	+	AluSx1	SINE/Alu	1	312	(0)	672104
1570	21.8	5.6	4.6	chr11	67688064	67688081	(67398541)	+	MLT1A	LTR/ERVL-MaLR	157	171	(203)	672103
41	6.4	0.0	0.0	chr11	67688082	67688130	(67398492)	+	(TC)n	Simple_repeat	1	49	(0)	672105
1570	21.8	5.6	4.6	chr11	67688131	67688315	(67398307)	+	MLT1A	LTR/ERVL-MaLR	172	374	(0)	672103
1041	23.1	11.0	4.1	chr11	68593952	68594216	(66492406)	+	L1MEc	LINE/L1	2349	2637	(3682)	673688
271	15.6	6.2	0.0	chr11	68594217	68594261	(66492361)	+	FAM	SINE/Alu	118	165	(20)	673690
77	5.1	2.0	0.0	chr11	68594266	68594366	(66492256)	+	(GA)n	Simple_repeat	1	103	(0)	673691
882	12.9	0.0	5.0	chr11	68594375	68594513	(66492109)	+	FLAM_C	SINE/Alu	1	132	(11)	673692
2152	11.2	0.0	0.0	chr11	69528572	69528848	(65557774)	+	AluSx	SINE/Alu	1	277	(35)	675239
53	2.0	0.0	0.0	chr11	69528850	69528899	(65557723)	+	(TC)n	Simple_repeat	1	50	(0)	675240
20	0.0	0.0	0.0	chr11	69528901	69528922	(65557700)	+	(AT)n	Simple_repeat	1	22	(0)	675241
772	19.5	1.9	0.0	chr11	69916883	69917036	(65169586)	C	MLT1D	LTR/ERVL-MaLR	(110)	395	239	675952
47	9.2	5.3	0.0	chr11	69917050	69917143	(65169479)	+	(CT)n	Simple_repeat	1	99	(0)	675955
18	10.1	0.0	2.9	chr11	69917148	69917181	(65169441)	+	(GCCCT)n	Simple_repeat	1	34	(0)	675956
467	11.6	5.2	0.1	chr11	69917181	69918020	(65168602)	+	(CT)n	Simple_repeat	1	884	(0)	675957
146	21.5	3.9	0.3	chr11	70092984	70093345	(64993277)	+	(TC)n	Simple_repeat	1	376	(0)	676258
592	26.1	1.8	0.5	chr11	70121139	70122782	(64963840)	+	(CTCTGT)n	Simple_repeat	1	1674	(0)	676297
34	10.3	1.4	6.8	chr11	71765686	71765757	(63320865)	+	(TC)n	Simple_repeat	1	73	(0)	678739
196	21.9	18.8	0.0	chr11	72725057	72725138	(62361484)	C	MIR3	SINE/MIR	(74)	134	34	680464
37	5.1	0.0	0.0	chr11	72725296	72725336	(62361286)	+	(CT)n	Simple_repeat	1	41	(0)	680465
15	11.8	8.1	0.0	chr11	73141921	73141957	(61944665)	+	GA-rich	Low_complexity	1	40	(0)	681262
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
42	0.0	0.0	0.0	chr11	73705768	73705803	(61380819)	+	(GA)n	Simple_repeat	1	36	(0)	682459
1140	13.9	0.0	2.3	chr11	73780804	73780976	(61305646)	+	AluSx1	SINE/Alu	105	273	(39)	682653
52	2.7	7.8	0.0	chr11	73780981	73781057	(61305565)	+	(AG)n	Simple_repeat	1	83	(0)	682654
2313	12.2	0.0	0.0	chr11	74350595	74350897	(60735725)	+	AluSq2	SINE/Alu	1	303	(10)	683886
43	2.5	0.0	0.0	chr11	74350898	74350938	(60735684)	+	(AG)n	Simple_repeat	1	41	(0)	683887
2716	18.6	6.3	1.4	chr11	74939368	74939822	(60146800)	C	L1MC4a	LINE/L1	(795)	7087	6605	685031
50	14.8	0.0	0.0	chr11	74939831	74939912	(60146710)	+	(GA)n	Simple_repeat	1	82	(0)	685034
1488	16.6	13.5	1.5	chr11	75883897	75884212	(59202410)	C	L1MD	LINE/L1	(465)	5714	5365	686980
45	2.4	0.0	0.0	chr11	75884213	75884255	(59202367)	+	(TC)n	Simple_repeat	1	43	(0)	686981
2656	19.9	13.3	2.8	chr11	75884256	75885248	(59201374)	C	L1MD	LINE/L1	(815)	5364	4243	686980
413	33.6	11.1	3.2	chr11	76129641	76129923	(58956699)	+	L2c	LINE/L2	2567	2879	(540)	687383
33	7.5	0.0	0.0	chr11	76129924	76129965	(58956657)	+	(CT)n	Simple_repeat	1	42	(0)	687384
496	33.0	12.2	5.2	chr11	76129966	76130431	(58956191)	+	L2c	LINE/L2	2880	3373	(14)	687383
189	21.2	0.0	0.0	chr11	76238106	76238138	(58848484)	+	L2b	LINE/L2	3125	3157	(218)	687588
422	24.0	8.8	1.8	chr11	76238321	76238492	(58848130)	+	MIRc	SINE/MIR	19	203	(65)	687589
967	12.3	0.0	7.7	chr11	76819631	76819709	(58266913)	C	MER51-int	LTR/ERV1	(6384)	155	77	688727
57	1.9	0.0	0.0	chr11	76819710	76819762	(58266860)	+	(AG)n	Simple_repeat	1	53	(0)	688733
967	12.3	0.0	7.7	chr11	76819763	76819850	(58266772)	C	MER51-int	LTR/ERV1	(6463)	76	1	688727
16	5.3	0.0	0.0	chr11	77020840	77020859	(58065763)	+	(AG)n	Simple_repeat	1	20	(0)	689108
16	6.7	0.0	8.1	chr11	77066885	77066921	(58019701)	+	(GGGCG)n	Simple_repeat	1	37	(0)	689201
189	26.4	7.0	0.0	chr11	78800647	78800699	(56285923)	C	L2b	LINE/L2	(2)	3373	3317	692676
35	0.0	0.0	0.0	chr11	78800737	78800766	(56285856)	+	(GA)n	Simple_repeat	1	30	(0)	692677
656	26.4	4.0	7.4	chr11	78800786	78801043	(56285579)	+	MIR	SINE/MIR	2	250	(12)	692678
15	12.2	0.0	0.0	chr11	79440908	79440934	(55645688)	+	(CCTG)n	Simple_repeat	1	27	(0)	693944
15	16.6	0.0	0.0	chr11	79440964	79440990	(55645632)	+	GA-rich	Low_complexity	1	27	(0)	693945
19	11.6	0.0	0.0	chr11	79440990	79441018	(55645604)	+	(AC)n	Simple_repeat	1	29	(0)	693946
8110	20.4	7.4	6.9	chr11	82680539	82682499	(52404123)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	664	699274
32	3.2	0.0	0.0	chr11	82682500	82682531	(52404091)	+	(GA)n	Simple_repeat	1	32	(0)	699275
8110	20.4	7.1	7.0	chr11	82682532	82682809	(52403813)	C	HUERS-P3b-int	LTR/ERV1	(6755)	663	409	699274
16	0.0	0.0	0.0	chr11	83724459	83724476	(51362146)	+	(GT)n	Simple_repeat	1	18	(0)	701123
54	0.0	0.0	0.0	chr11	83724477	83724522	(51362100)	+	(GA)n	Simple_repeat	1	46	(0)	701124
119	4.3	2.8	0.0	chr11	84714527	84714670	(50371952)	+	(CTCTTT)n	Simple_repeat	1	148	(0)	702814
16	25.7	3.2	1.6	chr11	84714698	84714759	(50371863)	+	(TTCCC)n	Simple_repeat	1	64	(0)	702815
2068	14.7	1.3	0.0	chr11	85916837	85917135	(49169487)	+	AluSx	SINE/Alu	9	311	(1)	704622
54	21.9	0.4	0.8	chr11	85917136	85917288	(49169334)	+	GA-rich	Low_complexity	1	152	(0)	704623
864	23.2	5.6	1.2	chr11	85917289	85917504	(49169118)	C	MLT1G3	LTR/ERVL-MaLR	(344)	235	11	704624
51	1.9	1.8	1.8	chr11	86126628	86126683	(48959939)	+	(TC)n	Simple_repeat	1	57	(0)	704976
29	17.8	0.0	0.0	chr11	86126684	86126740	(48959882)	+	(ACAC)n	Simple_repeat	1	57	(0)	704977
21	0.0	0.0	0.0	chr11	86475852	86475874	(48610748)	+	(TA)n	Simple_repeat	1	23	(0)	705619
48	4.2	0.0	0.0	chr11	86475875	86475924	(48610698)	+	(AG)n	Simple_repeat	1	50	(0)	705620
212	34.1	3.4	0.0	chr11	86776068	86776152	(48310470)	C	MIRc	SINE/MIR	(172)	96	9	706101
76	2.7	0.0	1.3	chr11	86776207	86776284	(48310338)	+	(TC)n	Simple_repeat	1	78	(0)	706102
270	31.8	5.9	3.0	chr11	86776285	86776507	(48310115)	C	CR1-16_AMi	LINE/CR1	(217)	634	404	706103
1426	23.0	4.1	1.6	chr11	88092228	88092326	(46994296)	C	MSTB	LTR/ERVL-MaLR	(109)	317	217	708043
131	1.7	0.0	0.0	chr11	88092327	88092446	(46994176)	+	(AG)n	Simple_repeat	1	120	(0)	708044
1426	23.0	4.1	1.6	chr11	88092447	88092655	(46993967)	C	MSTB	LTR/ERVL-MaLR	(210)	216	2	708043
1790	17.0	2.4	0.0	chr11	88278224	88278505	(46808117)	+	AluJr	SINE/Alu	1	289	(23)	708299
728	18.5	1.3	4.4	chr11	88278518	88278675	(46807947)	+	L1PB4	LINE/L1	5999	6151	(5)	708298
29	26.7	1.1	1.1	chr11	88357352	88357442	(46729180)	+	GA-rich	Low_complexity	1	92	(0)	708438
211	26.6	1.5	3.0	chr11	88357563	88357628	(46728994)	+	MamTip2	DNA/hAT-Tip100	92	156	(149)	708439
152	7.2	5.1	0.0	chr11	89177007	89177241	(45909381)	+	(GA)n	Simple_repeat	1	247	(0)	709647
29	0.0	2.9	0.0	chr11	92223773	92223806	(42862816)	+	(CT)n	Simple_repeat	1	35	(0)	713861
50	0.0	0.0	0.0	chr11	92223807	92223849	(42862773)	+	(TG)n	Simple_repeat	1	43	(0)	713862
30	10.0	0.0	0.0	chr11	92315437	92315480	(42771142)	+	(GT)n	Simple_repeat	1	44	(0)	713978
29	0.0	0.0	0.0	chr11	92315481	92315512	(42771110)	+	(AT)n	Simple_repeat	1	32	(0)	713979
50	0.0	0.0	0.0	chr11	92315513	92315555	(42771067)	+	(AG)n	Simple_repeat	1	43	(0)	713980
1740	17.1	0.8	0.0	chr11	92315556	92315818	(42770804)	C	AluJb	SINE/Alu	(44)	268	4	713981
46	0.0	0.0	0.0	chr11	92330966	92331004	(42755618)	+	(GT)n	Simple_repeat	1	39	(0)	714003
15	0.0	0.0	0.0	chr11	92331005	92331021	(42755601)	+	(AG)n	Simple_repeat	1	17	(0)	714004
1876	16.5	20.6	8.4	chr11	92373811	92374021	(42712601)	C	MLT2B3	LTR/ERVL	(39)	515	220	714064
38	2.8	0.0	0.0	chr11	92374022	92374058	(42712564)	+	(AG)n	Simple_repeat	1	37	(0)	714066
1876	16.5	20.6	8.4	chr11	92374059	92374273	(42712349)	C	MLT2B3	LTR/ERVL	(335)	219	5	714064
27	20.8	2.9	1.4	chr11	92700771	92700838	(42385784)	+	(TC)n	Simple_repeat	1	70	(0)	714553
3563	20.4	7.3	1.3	chr11	93262586	93263362	(41823260)	+	HERVIP10F-int	LTR/ERV1	2270	3093	(4510)	715339
37	2.9	0.0	0.0	chr11	94419460	94419495	(40667127)	+	(GA)n	Simple_repeat	1	36	(0)	717086
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
43	0.0	0.0	0.0	chr11	94707215	94707251	(40379371)	+	(TC)n	Simple_repeat	1	37	(0)	717547
30	0.0	0.0	0.0	chr11	94707252	94707284	(40379338)	+	(GT)n	Simple_repeat	1	33	(0)	717548
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
41	4.7	0.0	0.0	chr11	95243025	95243068	(39843554)	+	(TC)n	Simple_repeat	1	44	(0)	718330
38	4.9	0.0	0.0	chr11	95415100	95415141	(39671481)	+	(AG)n	Simple_repeat	1	42	(0)	718596
23	0.0	0.0	0.0	chr11	95415142	95415166	(39671456)	+	(TG)n	Simple_repeat	1	25	(0)	718597
46	0.0	0.0	0.0	chr11	95415167	95415205	(39671417)	+	(GA)n	Simple_repeat	1	39	(0)	718598
267	39.1	2.7	0.9	chr11	95586285	95586501	(39500121)	+	UCON8	DNA	751	971	(144)	718869
38	2.8	0.0	0.0	chr11	95586573	95586609	(39500013)	+	(CT)n	Simple_repeat	1	37	(0)	718870
1505	27.8	8.4	3.3	chr11	96165595	96165931	(38920691)	C	L1ME4a	LINE/L1	(447)	5677	5341	719735
59	9.2	2.8	0.9	chr11	96166073	96166178	(38920444)	+	(TC)n	Simple_repeat	1	109	(0)	719738
36	2.3	2.3	0.0	chr11	96166179	96166222	(38920400)	+	(AC)n	Simple_repeat	1	45	(0)	719739
354	34.9	4.0	8.7	chr11	96278409	96278694	(38807928)	C	L2c	LINE/L2	(67)	3320	3049	719909
428	32.7	11.1	5.4	chr11	96278812	96279235	(38807387)	C	L2c	LINE/L2	(609)	2810	2360	719909
20	16.6	4.2	0.0	chr11	96343173	96343220	(38743402)	+	GA-rich	Low_complexity	1	50	(0)	720005
95	3.3	0.0	0.0	chr11	96914326	96914419	(38172203)	+	(TC)n	Simple_repeat	1	94	(0)	720653
52	11.6	1.1	0.0	chr11	100577769	100577861	(34508761)	+	(TC)n	Simple_repeat	1	94	(0)	725194
31	2.8	0.0	0.0	chr11	100875071	100875107	(34211515)	+	(CT)n	Simple_repeat	1	37	(0)	725646
54	0.0	0.0	0.0	chr11	100875108	100875153	(34211469)	+	(TG)n	Simple_repeat	1	46	(0)	725647
1422	17.8	10.0	4.3	chr11	101246071	101246722	(33839900)	+	HERVIP10FH-int	LTR/ERV1	704	1411	(3691)	726120
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
1409	19.1	3.5	4.9	chr11	102499714	102500000	(32586622)	C	MSTD	LTR/ERVL-MaLR	(0)	396	114	728039
551	22.3	0.0	0.0	chr11	102500002	102500113	(32586509)	C	MSTC	LTR/ERVL-MaLR	(316)	112	1	728040
370	25.6	7.1	2.0	chr11	107590088	107590254	(27496368)	C	MIR	SINE/MIR	(78)	190	5	735146
126	0.0	0.0	0.0	chr11	107590333	107590439	(27496183)	+	(TC)n	Simple_repeat	1	107	(0)	735147
317	17.9	0.0	0.0	chr11	107653272	107653330	(27433292)	+	AluY	SINE/Alu	217	275	(27)	735241
29	0.0	0.0	0.0	chr11	107653336	107653360	(27433262)	+	(AG)n	Simple_repeat	1	25	(0)	735242
20	8.9	5.7	5.4	chr11	107858872	107858924	(27227698)	+	(CGCT)n	Simple_repeat	1	56	(0)	735683
643	24.1	0.6	1.2	chr11	107864010	107864169	(27222453)	C	MLT1G1	LTR/ERVL-MaLR	(4)	565	407	735701
61	0.0	0.0	0.0	chr11	107864237	107864288	(27222334)	+	(TC)n	Simple_repeat	1	52	(0)	735702
289	25.0	0.8	18.4	chr11	107864310	107864456	(27222166)	C	MLT1G1	LTR/ERVL-MaLR	(299)	292	172	735701
1996	13.5	12.5	2.1	chr11	108278499	108278884	(26807738)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	736547
1195	22.4	7.5	2.5	chr11	108748687	108748963	(26337659)	C	AluJr	SINE/Alu	(20)	292	1	737346
38	2.8	0.0	0.0	chr11	108749051	108749087	(26337535)	+	(TC)n	Simple_repeat	1	37	(0)	737347
594	12.6	0.0	0.0	chr11	108749113	108749199	(26337423)	C	Alu	SINE/Alu	(224)	87	1	737348
940	20.7	6.9	1.0	chr11	108755389	108755593	(26331029)	+	MER58A	DNA/hAT-Charlie	7	224	(0)	737358
2996	13.6	0.2	0.9	chr11	109009123	109009561	(26077061)	C	Charlie3	DNA/hAT-Charlie	(2270)	436	1	737733
44	0.0	0.0	0.0	chr11	109009599	109009636	(26076986)	+	(AC)n	Simple_repeat	1	38	(0)	737734
54	3.7	0.0	0.0	chr11	109009644	109009698	(26076924)	+	(CT)n	Simple_repeat	1	55	(0)	737735
2351	15.1	1.3	1.5	chr11	109009829	109010217	(26076405)	+	L1PB4	LINE/L1	5767	6154	(2)	737736
341	24.7	0.0	0.0	chr11	109151419	109151511	(25935111)	C	MLT1K	LTR/ERVL-MaLR	(28)	567	475	737956
2302	14.6	4.9	6.5	chr11	110368046	110368421	(24718201)	C	MSTB	LTR/ERVL-MaLR	(0)	426	57	739736
13	27.9	2.9	2.9	chr11	110429986	110430053	(24656569)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	739820
249	27.7	1.2	3.5	chr11	110480058	110480143	(24606479)	C	MLT1J1	LTR/ERVL-MaLR	(20)	424	341	739911
28	14.3	0.0	0.0	chr11	110763878	110763923	(24322699)	+	(TC)n	Simple_repeat	1	46	(0)	740291
316	35.1	3.5	0.0	chr11	110763989	110764156	(24322466)	C	Tigger15a	DNA/TcMar-Tigger	(0)	715	542	740292
1711	16.3	5.4	0.3	chr11	110884056	110884224	(24202398)	C	AluSz	SINE/Alu	(15)	297	114	740496
62	0.0	0.0	0.0	chr11	110884225	110884277	(24202345)	+	(AG)n	Simple_repeat	1	53	(0)	740497
1711	16.3	5.4	0.3	chr11	110884278	110884389	(24202233)	C	AluSz	SINE/Alu	(200)	112	1	740496
2523	9.9	0.3	0.3	chr11	111692069	111692380	(23394242)	+	AluSx	SINE/Alu	1	312	(0)	741808
23	23.1	2.9	0.0	chr11	111692381	111692423	(23394199)	+	GA-rich	Low_complexity	25	69	(0)	741809
192	27.4	17.9	3.9	chr11	111692445	111692573	(23394049)	C	L2b	LINE/L2	(311)	3064	2914	741810
31	25.8	3.7	1.8	chr11	112113406	112113514	(22973108)	+	(TA)n	Simple_repeat	1	113	(0)	742560
48	0.0	0.0	0.0	chr11	112113515	112113555	(22973067)	+	(AG)n	Simple_repeat	1	41	(0)	742561
21	25.6	1.7	0.0	chr11	112971112	112971170	(22115452)	+	GA-rich	Low_complexity	1	60	(0)	743922
42	4.6	0.0	0.0	chr11	112971227	112971271	(22115351)	+	(TC)n	Simple_repeat	1	45	(0)	743923
240	19.4	6.9	1.5	chr11	112971277	112971344	(22115278)	+	MER112	DNA/hAT-Charlie	190	261	(0)	743924
1087	28.5	5.1	2.4	chr11	113001736	113002116	(22084506)	C	MLT1K	LTR/ERVL-MaLR	(23)	572	181	743957
702	12.8	0.0	0.0	chr11	113025640	113025733	(22060889)	+	AluSx3	SINE/Alu	204	297	(14)	743990
60	1.8	0.0	0.0	chr11	113025779	113025834	(22060788)	+	(GA)n	Simple_repeat	1	56	(0)	743991
2328	15.2	3.0	5.9	chr11	113507314	113507752	(21578870)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	744666
55	0.0	0.0	0.0	chr11	113507906	113507952	(21578670)	+	(CT)n	Simple_repeat	1	47	(0)	744667
31	26.9	2.6	0.8	chr11	113699157	113699211	(21387411)	+	(TCTGTC)n	Simple_repeat	1	58	(0)	745013
104	2.1	0.0	0.0	chr11	113699212	113699308	(21387314)	+	(TC)n	Simple_repeat	1	97	(0)	745014
31	26.9	2.6	0.8	chr11	113699309	113699366	(21387256)	+	(TCTGTC)n	Simple_repeat	5	61	(0)	745015
2189	10.4	0.3	0.3	chr11	113822170	113822457	(21264165)	+	AluSg	SINE/Alu	1	288	(22)	745208
50	0.0	0.0	0.0	chr11	113822459	113822501	(21264121)	+	(AG)n	Simple_repeat	1	43	(0)	745209
637	22.0	0.0	0.0	chr11	113822503	113822611	(21264011)	C	FLAM_A	SINE/Alu	(32)	110	2	745210
371	28.4	19.5	0.0	chr11	113906309	113906519	(21180103)	+	MIRc	SINE/MIR	2	263	(5)	745370
23	11.3	0.0	4.8	chr11	114080426	114080467	(21006155)	+	(CT)n	Simple_repeat	1	42	(0)	745717
63	0.0	1.7	0.0	chr11	114148337	114148396	(20938226)	+	(CTTC)n	Simple_repeat	1	61	(0)	745803
39	17.2	0.0	0.0	chr11	114148397	114148469	(20938153)	+	(CTCT)n	Simple_repeat	1	73	(0)	745804
16	9.1	0.0	3.9	chr11	114162872	114162897	(20923725)	+	(TC)n	Simple_repeat	1	26	(0)	745822
28	12.6	0.0	0.0	chr11	114179258	114179300	(20907322)	+	(GA)n	Simple_repeat	1	43	(0)	745853
240	32.9	1.2	0.0	chr11	114783868	114783952	(20302670)	+	MIRc	SINE/MIR	11	96	(172)	746714
371	23.5	4.8	1.0	chr11	114784052	114784150	(20302472)	C	MIR	SINE/MIR	(157)	105	3	746715
86	2.5	0.0	0.0	chr11	115117486	115117567	(19969055)	+	(GA)n	Simple_repeat	1	82	(0)	747227
23	8.6	2.6	2.5	chr11	115223974	115224012	(19862610)	+	(AG)n	Simple_repeat	1	40	(0)	747366
186	31.0	8.2	7.5	chr11	115283766	115283924	(19802698)	+	L2a	LINE/L2	3163	3373	(53)	747427
24	0.0	0.0	0.0	chr11	115284088	115284114	(19802508)	+	(CT)n	Simple_repeat	1	27	(0)	747428
48	0.0	0.0	0.0	chr11	115284115	115284155	(19802467)	+	(TG)n	Simple_repeat	1	41	(0)	747429
29	0.0	0.0	0.0	chr11	115458118	115458142	(19628480)	+	(TC)n	Simple_repeat	1	25	(0)	747667
621	27.2	5.9	3.0	chr11	115458297	115458493	(19628129)	+	MIRb	SINE/MIR	61	263	(5)	747668
460	28.8	3.4	9.5	chr11	115476435	115476618	(19610004)	C	Tigger19a	DNA/TcMar-Tigger	(111)	212	40	747689
50	2.2	0.0	0.0	chr11	115523084	115523130	(19563492)	+	(GA)n	Simple_repeat	1	47	(0)	747752
19	32.6	1.3	1.3	chr11	115523131	115523205	(19563417)	+	GA-rich	Low_complexity	1	76	(0)	747753
374	20.8	2.7	0.0	chr11	115685767	115685838	(19400784)	+	MLT1I	LTR/ERVL-MaLR	69	142	(306)	748081
51	0.0	2.1	0.0	chr11	115685872	115685918	(19400704)	+	(TC)n	Simple_repeat	1	48	(0)	748082
444	27.4	8.2	2.0	chr11	115685956	115686104	(19400518)	+	MLT1I	LTR/ERVL-MaLR	245	403	(8)	748081
130	3.8	0.7	0.0	chr11	116130855	116130990	(18955632)	+	(CT)n	Simple_repeat	1	137	(0)	748747
461	31.7	8.0	1.5	chr11	116240130	116240398	(18846224)	+	L1MC4	LINE/L1	942	1229	(4986)	748940
148	14.3	1.8	2.1	chr11	116240400	116240681	(18845941)	+	GA-rich	Low_complexity	1	287	(0)	748941
34	3.0	0.0	0.0	chr11	116274611	116274644	(18811978)	+	(GA)n	Simple_repeat	1	34	(0)	749009
818	18.0	0.0	5.3	chr11	116277406	116277555	(18809067)	+	AluSx	SINE/Alu	135	276	(36)	749013
36	0.0	0.0	0.0	chr11	116277559	116277598	(18809024)	+	(TC)n	Simple_repeat	1	40	(0)	749014
1612	18.9	0.8	0.4	chr11	116917428	116917692	(18168930)	+	AluJr4	SINE/Alu	1	266	(46)	750139
33	28.9	5.2	0.0	chr11	116917695	116917823	(18168799)	+	GA-rich	Low_complexity	1	136	(0)	750140
49	0.0	2.1	0.0	chr11	116917824	116917871	(18168751)	+	(AAGGA)n	Simple_repeat	1	49	(0)	750141
23	11.1	0.0	0.0	chr11	117144738	117144776	(17941846)	+	(GCCCT)n	Simple_repeat	1	39	(0)	750609
44	19.7	2.8	1.8	chr11	118162065	118162172	(16924450)	+	GA-rich	Low_complexity	1	111	(0)	752427
23	16.4	1.9	3.8	chr11	118176619	118176670	(16909952)	+	GA-rich	Low_complexity	1	53	(0)	752450
2065	10.0	4.1	0.0	chr11	118400840	118401118	(16685504)	+	AluSx1	SINE/Alu	1	291	(21)	752841
41	2.4	0.0	2.3	chr11	118434450	118434493	(16652129)	+	(AG)n	Simple_repeat	1	44	(0)	752904
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
14	25.2	3.5	1.7	chr11	119729178	119729235	(15357387)	+	(CGCTCT)n	Simple_repeat	1	60	(0)	755357
708	18.0	0.7	3.5	chr11	120280398	120280541	(14806081)	C	MIRb	SINE/MIR	(34)	234	95	756279
34	10.3	1.9	0.0	chr11	120280597	120280648	(14805974)	+	(GA)n	Simple_repeat	1	53	(0)	756280
71	20.8	0.0	0.7	chr11	120347119	120347265	(14739357)	+	(CTTT)n	Simple_repeat	1	147	(0)	756404
43	0.0	0.0	0.0	chr11	120347271	120347307	(14739315)	+	(TG)n	Simple_repeat	1	37	(0)	756405
513	25.3	17.2	15.1	chr11	121714359	121714828	(13371794)	+	MLT1H1	LTR/ERVL-MaLR	74	555	(0)	758513
115	3.6	0.0	0.0	chr11	121765654	121765769	(13320853)	+	(TC)n	Simple_repeat	1	116	(0)	758594
96	2.2	0.0	0.0	chr11	123119000	123119090	(11967532)	+	(TC)n	Simple_repeat	1	91	(0)	760886
2419	9.0	0.3	0.3	chr11	123119091	123119381	(11967241)	C	AluSp	SINE/Alu	(20)	293	2	760885
1439	24.2	1.9	7.9	chr11	123213284	123213660	(11872962)	+	LTR37B	LTR/ERV1	120	466	(2)	761091
26	21.8	5.6	0.0	chr11	123358226	123358296	(11728326)	+	GA-rich	Low_complexity	1	75	(0)	761388
13	14.3	3.0	2.9	chr11	123358621	123358653	(11727969)	+	(TCC)n	Simple_repeat	1	34	(0)	761389
31	3.3	0.0	0.0	chr11	123430261	123430291	(11656331)	+	(CT)n	Simple_repeat	1	31	(0)	761530
53	0.0	0.0	0.0	chr11	123625937	123625981	(11460641)	+	(AG)n	Simple_repeat	1	45	(0)	761888
31	11.5	0.0	0.0	chr11	124082704	124082750	(11003872)	+	(AG)n	Simple_repeat	1	47	(0)	762521
12	25.6	0.0	0.0	chr11	124876298	124876334	(10210288)	+	G-rich	Low_complexity	1	37	(0)	763704
582	26.3	8.2	1.6	chr11	125177428	125177620	(9909002)	+	MIRb	SINE/MIR	25	231	(37)	764092
967	24.9	9.1	0.0	chr11	125300300	125300528	(9786094)	C	MIR	SINE/MIR	(0)	262	11	764296
280	25.4	1.5	2.9	chr11	125328256	125328324	(9758298)	+	L2c	LINE/L2	3242	3309	(78)	764340
54	15.1	0.0	0.0	chr11	125328325	125328419	(9758203)	+	GA-rich	Low_complexity	1	95	(0)	764341
716	26.4	3.0	4.1	chr11	125411147	125411385	(9675237)	+	MIRc	SINE/MIR	17	250	(18)	764462
56	0.0	0.0	0.0	chr11	125411463	125411510	(9675112)	+	(TC)n	Simple_repeat	1	48	(0)	764463
47	12.4	0.0	0.0	chr11	125482008	125482078	(9604544)	+	(AG)n	Simple_repeat	1	71	(0)	764588
35	5.3	0.0	0.0	chr11	126115505	126115543	(8971079)	+	(CT)n	Simple_repeat	1	39	(0)	765536
1904	11.5	8.2	0.0	chr11	126516814	126517092	(8569530)	+	AluSz	SINE/Alu	4	307	(5)	766212
56	3.6	0.0	0.0	chr11	126517120	126517176	(8569446)	+	(GA)n	Simple_repeat	1	57	(0)	766213
228	25.7	2.8	1.4	chr11	126517179	126517249	(8569373)	C	MIR	SINE/MIR	(74)	188	117	766214
401	30.4	6.6	3.9	chr11	126585959	126586136	(8500486)	+	AmnSINE1	SINE/5S-Deu-L2	313	495	(80)	766326
56	6.7	2.5	0.0	chr11	126755824	126755902	(8330720)	+	(AG)n	Simple_repeat	1	81	(0)	766594
39	9.1	0.0	0.0	chr11	126831363	126831452	(8255170)	+	(TC)n	Simple_repeat	1	90	(0)	766716
646	31.2	10.7	5.4	chr11	128386212	128386730	(6699892)	+	LTR81A	LTR/Gypsy	629	1178	(172)	768855
18	12.0	0.0	0.0	chr11	128386803	128386829	(6699793)	+	(AC)n	Simple_repeat	1	27	(0)	768858
29	12.0	0.0	0.0	chr11	128386829	128386875	(6699747)	+	(AGAG)n	Simple_repeat	1	47	(0)	768859
78	4.9	0.0	0.0	chr11	128414442	128414525	(6672097)	+	(AG)n	Simple_repeat	1	84	(0)	768900
5500	23.0	5.5	7.0	chr11	128414526	128415281	(6671341)	+	LTR37-int	LTR/ERV1	1329	2059	(2001)	768899
17	13.0	7.1	0.0	chr11	128522439	128522480	(6564142)	+	G-rich	Low_complexity	1	45	(0)	769017
61	0.0	0.0	0.0	chr11	128693942	128693993	(6392629)	+	(GA)n	Simple_repeat	1	52	(0)	769253
45	21.4	1.0	0.0	chr11	128790271	128790367	(6296255)	+	GA-rich	Low_complexity	1	98	(0)	769400
40	5.3	4.9	0.0	chr11	128891365	128891397	(6195225)	+	(GA)n	Simple_repeat	1	34	(0)	769534
53	0.0	0.0	0.0	chr11	128891398	128891442	(6195180)	+	(AC)n	Simple_repeat	1	45	(0)	769535
40	5.3	4.9	0.0	chr11	128891443	128891476	(6195146)	+	(GA)n	Simple_repeat	2	35	(0)	769536
60	0.0	0.0	0.0	chr11	129923644	129923694	(5162928)	+	(GA)n	Simple_repeat	1	51	(0)	771000
23	16.6	6.6	0.0	chr11	130434673	130434733	(4651889)	+	(CTCG)n	Simple_repeat	1	65	(0)	771915
18	10.7	0.0	3.0	chr11	131890111	131890127	(3196495)	+	(CA)n	Simple_repeat	1	16	(0)	773962
63	4.6	0.0	0.0	chr11	131890128	131890194	(3196428)	+	(CT)n	Simple_repeat	1	67	(0)	773963
349	32.8	6.0	3.5	chr11	131900338	131900675	(3185947)	C	L2a	LINE/L2	(497)	2922	2576	773976
376	29.8	14.7	1.9	chr11	133544525	133544791	(1541831)	+	MER102b	DNA/hAT-Charlie	1	307	(34)	776071
59	0.0	0.0	0.0	chr11	133544827	133544876	(1541746)	+	(TC)n	Simple_repeat	1	50	(0)	776072
5107	14.4	7.3	3.1	chr11	133801121	133801906	(1284716)	+	Ricksha_c	DNA/MULE-MuDR	8	847	(1201)	776399
51	10.8	0.0	0.0	chr11	133801907	133801986	(1284636)	+	(TC)n	Simple_repeat	1	80	(0)	776400
5107	14.4	7.3	3.1	chr11	133801987	133802101	(1284521)	+	Ricksha_c	DNA/MULE-MuDR	848	950	(1098)	776399
37	0.0	0.0	0.0	chr11	133947709	133947740	(1138882)	+	(TC)n	Simple_repeat	1	32	(0)	776554
60	29.1	3.0	3.6	chr11	133947746	133948042	(1138580)	+	(TCTG)n	Simple_repeat	1	306	(0)	776555
282	33.8	10.1	0.0	chr11	134418914	134419046	(667576)	+	MER117	DNA/hAT-Charlie	3	150	(47)	777194
34	0.0	0.0	0.0	chr11	134419062	134419077	(667545)	+	(GA)n	Simple_repeat	1	16	(0)	777195
44	0.0	0.0	0.0	chr11	134419078	134419115	(667507)	+	(CA)n	Simple_repeat	1	38	(0)	777196
34	0.0	0.0	0.0	chr11	134419116	134419135	(667487)	+	(GA)n	Simple_repeat	1	20	(0)	777197
268	35.4	12.7	1.7	chr11	134419254	134419434	(667188)	C	L2c	LINE/L2	(1)	3386	3183	777198
467	32.9	16.1	2.7	chr12	202196	202489	(133072820)	+	L2b	LINE/L2	3035	3375	(0)	778379
2595	6.5	0.0	0.0	chr12	540732	541041	(132734268)	C	AluY	SINE/Alu	(0)	311	2	778938
24	6.8	0.0	0.0	chr12	662403	662433	(132612876)	+	(AG)n	Simple_repeat	1	31	(0)	779179
54	8.0	1.2	1.2	chr12	1007461	1007541	(132267768)	+	(TC)n	Simple_repeat	1	82	(0)	779908
25	0.0	0.0	0.0	chr12	1007542	1007569	(132267740)	+	(GT)n	Simple_repeat	1	28	(0)	779909
462	21.9	0.0	3.7	chr12	1007664	1007772	(132267537)	C	MER3	DNA/hAT-Charlie	(2)	207	103	779910
1840	16.9	2.4	0.3	chr12	1196498	1196787	(132078522)	C	AluJb	SINE/Alu	(14)	298	3	780275
66	9.8	0.0	0.0	chr12	1196807	1196905	(132078404)	+	(TCTC)n	Simple_repeat	1	99	(0)	780276
67	0.0	0.0	0.0	chr12	1196906	1196962	(132078347)	+	(AC)n	Simple_repeat	1	57	(0)	780277
359	29.4	8.4	3.2	chr12	1205018	1205226	(132070083)	C	MIR	SINE/MIR	(0)	262	50	780291
223	28.1	2.7	0.0	chr12	1206320	1206402	(132068907)	+	MIR	SINE/MIR	79	164	(98)	780295
30	10.5	3.9	0.0	chr12	1315712	1315762	(131959547)	+	(AG)n	Simple_repeat	1	53	(0)	780477
49	5.7	0.0	0.0	chr12	1362430	1362484	(131912825)	+	(CT)n	Simple_repeat	1	55	(0)	780539
331	22.2	10.0	0.0	chr12	1576675	1576755	(131698554)	C	Chap1_Mam	DNA/hAT-Charlie	(83)	259	170	780901
17	17.9	2.7	7.9	chr12	1594790	1594863	(131680446)	+	(GCGCCC)n	Simple_repeat	1	76	(0)	780921
1855	14.4	0.0	1.4	chr12	1601114	1601390	(131673919)	+	AluJb	SINE/Alu	1	273	(39)	780933
37	14.4	2.6	1.2	chr12	1661850	1661927	(131613382)	+	G-rich	Low_complexity	1	80	(0)	781039
31	0.0	0.0	0.0	chr12	1924796	1924829	(131350480)	+	(GT)n	Simple_repeat	1	34	(0)	781437
50	2.2	0.0	0.0	chr12	1924830	1924876	(131350433)	+	(GA)n	Simple_repeat	1	47	(0)	781438
40	2.6	0.0	0.0	chr12	2646752	2646790	(130628519)	+	(GA)n	Simple_repeat	1	39	(0)	782467
21	23.4	0.0	0.0	chr12	2646791	2646835	(130628474)	+	(TG)n	Simple_repeat	2	46	(0)	782468
1564	10.6	17.5	0.0	chr12	2813042	2813286	(130462023)	C	AluSx1	SINE/Alu	(15)	297	1	782699
33650	12.1	3.4	4.5	chr12	3422844	3429973	(129845336)	C	Harlequin-int	LTR/ERV1	(0)	6896	1	783827
53	0.0	0.0	0.0	chr12	3490676	3490720	(129784589)	+	(AG)n	Simple_repeat	1	45	(0)	783925
1329	15.4	8.0	20.9	chr12	3746183	3746617	(129528692)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	784343
1065	27.5	8.8	8.0	chr12	3882165	3882591	(129392718)	C	L2a	LINE/L2	(0)	3426	2996	784534
38	0.0	0.0	0.0	chr12	3882593	3882625	(129392684)	+	(GA)n	Simple_repeat	1	33	(0)	784535
32	13.1	0.0	0.0	chr12	3882626	3882675	(129392634)	+	(TG)n	Simple_repeat	1	50	(0)	784536
29	5.0	2.3	2.3	chr12	3890751	3890775	(129384534)	+	(TA)n	Simple_repeat	1	25	(0)	784557
52	2.1	0.0	0.0	chr12	3890776	3890824	(129384485)	+	(AG)n	Simple_repeat	1	49	(0)	784558
65	5.7	0.0	0.0	chr12	3892825	3892897	(129382412)	+	(CT)n	Simple_repeat	1	73	(0)	784562
180	29.8	13.0	1.1	chr12	3892902	3892996	(129382313)	+	L2	LINE/L2	2206	2313	(1106)	784561
1477	21.1	4.3	11.4	chr12	4073591	4073760	(129201549)	+	MLT1A	LTR/ERVL-MaLR	1	162	(212)	784888
34	3.0	0.0	0.0	chr12	4073761	4073794	(129201515)	+	(TC)n	Simple_repeat	1	34	(0)	784889
1477	21.1	4.3	11.4	chr12	4073795	4073838	(129201471)	+	MLT1A	LTR/ERVL-MaLR	163	175	(199)	784888
45	2.4	0.0	0.0	chr12	4073839	4073881	(129201428)	+	(CT)n	Simple_repeat	1	43	(0)	784890
1477	21.1	4.3	11.4	chr12	4073882	4074067	(129201242)	+	MLT1A	LTR/ERVL-MaLR	176	372	(2)	784888
36	14.1	4.3	0.0	chr12	4625684	4625753	(128649556)	+	GA-rich	Low_complexity	1	73	(0)	785810
274	19.1	5.7	1.1	chr12	5483038	5483222	(127792087)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	818	787097
67	6.5	0.0	0.0	chr12	5873197	5873276	(127402033)	+	(CT)n	Simple_repeat	1	80	(0)	787657
15	22.0	2.0	3.9	chr12	6766353	6766403	(126508906)	+	(CGG)n	Simple_repeat	1	52	(0)	789350
40	7.7	0.0	0.0	chr12	6778328	6778382	(126496927)	+	(CCGGAG)n	Simple_repeat	1	55	(0)	789363
23	14.5	0.0	0.0	chr12	6778615	6778652	(126496657)	+	(TC)n	Simple_repeat	1	38	(0)	789364
30	30.9	3.5	0.0	chr12	6828284	6828399	(126446910)	+	(TCTC)n	Simple_repeat	1	120	(0)	789481
47	0.0	0.0	0.0	chr12	7137757	7137796	(126137513)	+	(TG)n	Simple_repeat	1	40	(0)	789998
28	19.0	1.6	1.6	chr12	7137797	7137858	(126137451)	+	GA-rich	Low_complexity	1	63	(0)	789999
159	9.9	3.4	3.0	chr12	7826813	7827107	(125448202)	+	(TCTT)n	Simple_repeat	1	305	(0)	791137
828	18.4	9.0	0.0	chr12	7827108	7827259	(125448050)	C	AluSp	SINE/Alu	(10)	303	137	791138
916	23.9	7.9	7.9	chr12	9331978	9332282	(123943027)	C	MLT1F2	LTR/ERVL-MaLR	(31)	529	225	793699
39	2.7	0.0	0.0	chr12	9332309	9332346	(123942963)	+	(GA)n	Simple_repeat	1	38	(0)	793700
716	20.9	6.2	0.6	chr12	9332437	9332608	(123942701)	+	MLT1A0	LTR/ERVL-MaLR	1	182	(226)	793701
1380	21.3	5.9	2.1	chr12	9618603	9618990	(123656319)	C	MLT1A1	LTR/ERVL-MaLR	(4)	404	1	794102
114	14.3	2.3	1.4	chr12	9618996	9619210	(123656099)	+	(TCTT)n	Simple_repeat	1	220	(0)	794103
1131	17.6	2.9	4.4	chr12	9619211	9619460	(123655849)	C	L1MB2	LINE/L1	(502)	5929	5684	794100
31	3.3	0.0	0.0	chr12	9751893	9751923	(123523386)	+	(AG)n	Simple_repeat	1	31	(0)	794271
2101	17.0	6.3	1.2	chr12	9751924	9752122	(123523187)	C	MSTA	LTR/ERVL-MaLR	(208)	220	2	794270
36	6.7	0.0	0.0	chr12	10010154	10010200	(123265109)	+	(TC)n	Simple_repeat	1	47	(0)	794592
43	0.0	0.0	0.0	chr12	10010201	10010237	(123265072)	+	(CA)n	Simple_repeat	1	37	(0)	794593
27	0.0	0.0	0.0	chr12	10027518	10027543	(123247766)	+	(CTGC)n	Simple_repeat	1	26	(0)	794621
30	23.3	0.0	3.6	chr12	10027544	10027627	(123247682)	+	(TCCC)n	Simple_repeat	1	84	(0)	794622
47	10.7	3.3	0.0	chr12	10027651	10027741	(123247568)	+	(TC)n	Simple_repeat	1	94	(0)	794623
29	0.0	0.0	0.0	chr12	10368865	10368889	(122906420)	+	(GA)n	Simple_repeat	1	25	(0)	795154
22	34.2	0.0	1.2	chr12	10368907	10368989	(122906320)	+	GA-rich	Low_complexity	1	83	(0)	795155
4917	26.8	7.0	7.0	chr12	10369013	10371485	(122903824)	+	HERVIP10F-int	LTR/ERV1	5405	7146	(591)	795156
643	26.1	14.3	4.9	chr12	10578700	10578881	(122696428)	+	MSTD	LTR/ERVL-MaLR	1	191	(174)	795375
40	4.8	0.0	0.0	chr12	10578882	10578924	(122696385)	+	(CT)n	Simple_repeat	1	43	(0)	795376
452	26.1	14.3	4.9	chr12	10578925	10578987	(122696322)	+	MSTD	LTR/ERVL-MaLR	192	273	(92)	795375
12	21.0	5.0	4.8	chr12	10723235	10723294	(122552015)	+	(GCGGCT)n	Simple_repeat	1	63	(0)	795577
49	9.3	0.0	0.0	chr12	11506927	11506995	(121768314)	+	(GA)n	Simple_repeat	1	69	(0)	796573
16	18.0	0.0	7.4	chr12	11649788	11649846	(121625463)	+	G-rich	Low_complexity	1	54	(0)	796817
23	11.5	0.0	0.0	chr12	12562926	12562963	(120712346)	+	(CCT)n	Simple_repeat	1	38	(0)	798344
13	20.4	0.0	7.7	chr12	12562962	12563013	(120712296)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	798345
869	16.5	0.0	0.0	chr12	12699980	12700112	(120575197)	C	FLAM_C	SINE/Alu	(10)	133	1	798596
25	12.3	4.4	0.0	chr12	12700133	12700177	(120575132)	+	(CT)n	Simple_repeat	1	47	(0)	798597
540	31.4	1.6	3.9	chr12	12761438	12761692	(120513617)	+	L1ME3G	LINE/L1	286	534	(390)	798725
20	20.9	0.0	0.0	chr12	12761791	12761830	(120513479)	+	(AT)n	Simple_repeat	1	40	(0)	798726
37	0.0	0.0	0.0	chr12	12761831	12761862	(120513447)	+	(AG)n	Simple_repeat	1	32	(0)	798727
1210	14.4	0.0	3.6	chr12	12761863	12762057	(120513252)	C	AluJo	SINE/Alu	(39)	273	86	798728
987	25.7	10.6	3.3	chr12	12779485	12779903	(120495406)	+	L1ME4c	LINE/L1	284	736	(94)	798764
17	0.0	0.0	0.0	chr12	12788890	12788908	(120486401)	+	(GA)n	Simple_repeat	1	19	(0)	798779
592	26.9	1.5	0.0	chr12	12842353	12842486	(120432823)	+	FordPrefect_a	DNA/hAT-Tip100	1	136	(372)	798883
410	15.3	1.4	0.0	chr12	12842487	12842558	(120432751)	C	L1M5	LINE/L1	(911)	5533	5461	798884
46	20.3	2.9	0.0	chr12	12842588	12842690	(120432619)	+	(TC)n	Simple_repeat	1	106	(0)	798885
481	24.1	10.2	1.4	chr12	12842696	12842723	(120432586)	C	L1ME1	LINE/L1	(8)	6326	6289	798886
931	13.7	0.0	0.0	chr12	12842724	12842854	(120432455)	+	FLAM_C	SINE/Alu	1	131	(12)	798887
638	26.3	14.3	1.3	chr12	12878069	12878299	(120397010)	+	MIRc	SINE/MIR	2	267	(1)	798975
48	5.2	0.0	0.0	chr12	12879901	12879960	(120395349)	+	(GA)n	Simple_repeat	1	60	(0)	798983
876	19.0	4.7	0.6	chr12	12879964	12880127	(120395182)	C	MLT1A	LTR/ERVL-MaLR	(196)	178	8	798982
60	3.5	0.0	7.7	chr12	12944854	12944957	(120330352)	+	(TTTC)n	Simple_repeat	1	104	(0)	799131
2063	13.0	2.2	0.7	chr12	12944959	12944977	(120330332)	C	AluSq2	SINE/Alu	(0)	313	295	799132
30	8.3	0.0	0.0	chr12	12944978	12945016	(120330293)	+	(TC)n	Simple_repeat	1	39	(0)	799133
2063	13.0	2.2	0.7	chr12	12945017	12945304	(120330005)	C	AluSq2	SINE/Alu	(19)	294	1	799132
118	11.2	0.0	3.5	chr12	12946252	12946454	(120328855)	+	(TTTC)n	Simple_repeat	1	203	(0)	799136
2130	13.7	0.0	0.0	chr12	12946455	12946754	(120328555)	C	AluSx	SINE/Alu	(12)	300	1	799137
315	21.5	7.4	0.1	chr12	12987496	12987584	(120287725)	+	L1ME4c	LINE/L1	5528	5605	(637)	799197
49	4.1	0.0	0.0	chr12	12987585	12987635	(120287674)	+	(TC)n	Simple_repeat	1	51	(0)	799198
2025	12.7	1.0	2.7	chr12	12987636	12987935	(120287374)	C	AluSz6	SINE/Alu	(17)	295	1	799199
1428	17.2	1.9	7.2	chr12	12993182	12993460	(120281849)	C	AluJb	SINE/Alu	(14)	298	35	799211
35	29.9	2.8	2.0	chr12	12993461	12993484	(120281825)	+	(TTTC)n	Simple_repeat	2	26	(0)	799212
37	0.0	0.0	0.0	chr12	12993487	12993518	(120281791)	+	(CT)n	Simple_repeat	1	32	(0)	799213
777	21.4	1.7	1.1	chr12	13098876	13099050	(120176259)	+	Arthur1A	DNA/hAT-Tip100	1	176	(1)	799369
79	24.7	3.2	0.5	chr12	14845511	14845727	(118429582)	+	GA-rich	Low_complexity	1	224	(0)	802005
264	29.7	2.8	6.8	chr12	14953563	14953710	(118321599)	C	Charlie4z	DNA/hAT-Charlie	(6)	161	20	802152
47	13.1	0.0	0.0	chr12	14953819	14953895	(118321414)	+	(CTCT)n	Simple_repeat	1	77	(0)	802153
1744	17.7	0.3	1.0	chr12	14953898	14953920	(118321389)	C	AluSz	SINE/Alu	(1)	311	290	802154
51	7.8	0.0	0.0	chr12	14953921	14953989	(118321320)	+	(CCTT)n	Simple_repeat	1	69	(0)	802155
17	20.8	3.4	3.3	chr12	15789446	15789504	(117485805)	+	(CGAG)n	Simple_repeat	1	61	(0)	803291
76	0.0	0.0	0.0	chr12	16193781	16193845	(117081464)	+	(GA)n	Simple_repeat	1	65	(0)	803931
42	15.8	1.4	0.0	chr12	17223699	17223771	(116051538)	+	GA-rich	Low_complexity	1	74	(0)	805241
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
46	5.4	0.0	1.7	chr12	19524022	19524081	(113751228)	+	(CTCC)n	Simple_repeat	1	60	(0)	808363
39	22.2	1.0	0.0	chr12	19524082	19524156	(113751153)	+	(TTTC)n	Simple_repeat	4	79	(0)	808364
2006	13.9	3.3	0.0	chr12	19524157	19524451	(113750858)	C	AluSx	SINE/Alu	(7)	305	1	808365
82	10.4	1.2	5.4	chr12	19548209	19548370	(113726939)	+	(TTCT)n	Simple_repeat	1	155	(0)	808415
1897	16.0	2.6	0.0	chr12	19548371	19548664	(113726645)	C	AluSz	SINE/Alu	(9)	303	2	808416
36	8.6	1.5	3.0	chr12	21599048	21599113	(111676196)	+	(TC)n	Simple_repeat	1	67	(0)	810979
16	20.9	2.4	0.0	chr12	21599114	21599154	(111676155)	+	(ATAT)n	Simple_repeat	1	42	(0)	810980
68	26.3	0.0	2.6	chr12	21617134	21617323	(111657986)	+	(TCCT)n	Simple_repeat	1	190	(0)	811006
2747	3.3	0.0	0.3	chr12	21658158	21658464	(111616845)	C	AluYf1	SINE/Alu	(5)	306	1	811058
281	29.1	10.0	3.3	chr12	21777516	21777636	(111497673)	+	L2a	LINE/L2	3292	3421	(5)	811212
16	17.6	0.0	2.9	chr12	21777670	21777703	(111497606)	+	(TC)n	Simple_repeat	1	34	(0)	811213
98	19.0	0.4	5.2	chr12	22851582	22851942	(110423367)	+	(TTCC)n	Simple_repeat	1	343	(0)	812790
15	29.1	5.1	0.0	chr12	23949700	23949731	(109325578)	+	(TC)n	Simple_repeat	1	33	(0)	814233
63	4.6	0.0	0.0	chr12	23949732	23949798	(109325511)	+	(CT)n	Simple_repeat	1	67	(0)	814234
15	29.1	5.1	0.0	chr12	23949799	23949824	(109325485)	+	(TC)n	Simple_repeat	2	29	(0)	814235
42	16.8	1.3	0.0	chr12	24015061	24015136	(109260173)	+	(TC)n	Simple_repeat	1	77	(0)	814334
284	34.7	4.9	4.4	chr12	24078469	24078649	(109196660)	C	L2	LINE/L2	(508)	2911	2730	814409
33	6.5	2.0	2.0	chr12	24562449	24562498	(108712811)	+	(TG)n	Simple_repeat	1	51	(0)	815079
16	22.7	3.4	1.6	chr12	24562499	24562550	(108712759)	+	(TCGC)n	Simple_repeat	3	55	(0)	815080
1286	17.9	2.5	2.2	chr12	24847192	24847465	(108427844)	C	L1MC1	LINE/L1	(0)	6333	6059	815508
739	27.9	9.2	0.0	chr12	24847466	24847516	(108427793)	C	MIRb	SINE/MIR	(189)	79	27	815507
26	15.3	0.0	0.0	chr12	24847598	24847641	(108427668)	+	GA-rich	Low_complexity	1	44	(0)	815509
217	23.0	22.1	1.3	chr12	24847718	24847792	(108427517)	+	MER5B	DNA/hAT-Charlie	1	95	(83)	815510
1704	12.4	11.3	4.5	chr12	24933505	24933634	(108341675)	+	THE1D	LTR/ERVL-MaLR	1	152	(229)	815671
3809	10.5	8.0	0.7	chr12	24933635	24934199	(108341110)	C	LTR9	LTR/ERV1	(2)	610	1	815672
2011	13.6	0.0	0.0	chr12	24936241	24936519	(108338790)	C	AluSz	SINE/Alu	(20)	292	14	815675
1872	17.4	10.1	9.6	chr12	24936520	24936723	(108338586)	C	MLT1D	LTR/ERVL-MaLR	(49)	456	239	815674
37	5.1	0.0	0.0	chr12	24936724	24936764	(108338545)	+	(CA)n	Simple_repeat	1	41	(0)	815676
1872	17.4	10.1	9.6	chr12	24936765	24936991	(108338318)	C	MLT1D	LTR/ERVL-MaLR	(267)	238	2	815674
38	12.4	1.6	0.0	chr12	25120281	25120342	(108154967)	+	(GA)n	Simple_repeat	1	63	(0)	816001
2737	2.9	0.3	1.3	chr12	25120441	25120751	(108154558)	+	AluYk3	SINE/Alu	1	308	(3)	816002
8908	19.4	4.0	6.9	chr12	25589973	25591811	(107683498)	+	L1MA2	LINE/L1	12	1755	(5810)	816708
55	0.0	0.0	0.0	chr12	25591812	25591858	(107683451)	+	(AG)n	Simple_repeat	1	47	(0)	816709
8908	19.4	4.0	6.9	chr12	25591859	25592182	(107683127)	+	L1MA2	LINE/L1	1756	2107	(5458)	816708
65	0.0	0.0	0.0	chr12	25668616	25668670	(107606639)	+	(CT)n	Simple_repeat	1	55	(0)	816797
1403	17.6	5.6	12.0	chr12	25950166	25950314	(107324995)	+	AluJr	SINE/Alu	1	133	(179)	817271
35	0.0	0.0	0.0	chr12	25950315	25950344	(107324965)	+	(AG)n	Simple_repeat	1	30	(0)	817272
1403	17.6	5.6	12.0	chr12	25950345	25950518	(107324791)	+	AluJr	SINE/Alu	134	302	(10)	817271
15	6.3	5.4	5.1	chr12	25958492	25958540	(107316769)	+	(GGCGCG)n	Simple_repeat	1	49	(0)	817285
235	31.1	10.8	1.5	chr12	25979317	25979450	(107295859)	C	L2	LINE/L2	(1289)	2130	1983	817320
20	8.0	0.0	0.0	chr12	26124959	26124985	(107150324)	+	(CA)n	Simple_repeat	1	27	(0)	817539
1850	27.2	5.9	0.8	chr12	26464898	26465508	(106809801)	C	L2c	LINE/L2	(939)	2480	1837	818011
19	28.5	0.0	0.0	chr12	26465586	26465636	(106809673)	+	(TC)n	Simple_repeat	1	51	(0)	818012
188	30.8	12.1	4.0	chr12	26465652	26465803	(106809506)	+	L2c	LINE/L2	3175	3340	(47)	818008
35	8.9	0.0	0.0	chr12	26467346	26467393	(106807916)	+	(TC)n	Simple_repeat	1	48	(0)	818017
19	4.3	0.0	0.0	chr12	26543356	26543379	(106731930)	+	(TG)n	Simple_repeat	1	24	(0)	818114
33	13.9	1.8	0.0	chr12	26543379	26543434	(106731875)	+	GA-rich	Low_complexity	1	57	(0)	818115
2027	12.5	5.7	0.0	chr12	26543504	26543783	(106731526)	+	AluSx1	SINE/Alu	1	297	(15)	818116
2335	6.0	11.8	3.0	chr12	26781631	26781991	(106493318)	+	MLT2A2	LTR/ERVL	1	397	(56)	818454
49	2.2	0.0	0.0	chr12	26781993	26782038	(106493271)	+	(TA)n	Simple_repeat	1	46	(0)	818455
38	2.3	0.0	0.0	chr12	26782039	26782082	(106493227)	+	(GA)n	Simple_repeat	1	44	(0)	818456
234	10.6	0.0	13.1	chr12	26782117	26782199	(106493110)	+	MLT2A2	LTR/ERVL	494	557	(4)	818454
365	36.3	6.0	5.7	chr12	26782239	26782539	(106492770)	+	L3	LINE/CR1	3572	3873	(226)	818457
372	24.9	2.2	1.5	chr12	27003816	27003922	(106271387)	+	MIRc	SINE/MIR	40	152	(78)	818827
38	0.0	0.0	0.0	chr12	27611786	27611818	(105663491)	+	(CT)n	Simple_repeat	1	33	(0)	819842
412	32.0	3.4	3.9	chr12	27963915	27964119	(105311190)	+	MIR3	SINE/MIR	3	206	(2)	820417
51	0.0	2.1	0.0	chr12	27964235	27964281	(105311028)	+	(TC)n	Simple_repeat	1	48	(0)	820418
42	0.0	0.0	0.0	chr12	27974094	27974129	(105301180)	+	(TG)n	Simple_repeat	1	36	(0)	820425
26	0.0	0.0	0.0	chr12	27974130	27974158	(105301151)	+	(AG)n	Simple_repeat	1	29	(0)	820426
45	6.0	0.0	0.0	chr12	28008915	28008966	(105266343)	+	(TC)n	Simple_repeat	1	52	(0)	820465
4769	6.2	2.0	4.4	chr12	29169953	29171035	(104104274)	C	HERV9N-int	LTR/ERV1	(932)	5186	3813	822010
382	29.1	11.8	5.0	chr12	29617448	29617536	(103657773)	C	L2a	LINE/L2	(36)	3390	3284	822602
38	0.0	0.0	0.0	chr12	29617537	29617569	(103657740)	+	(AG)n	Simple_repeat	1	33	(0)	822603
382	26.8	17.5	2.9	chr12	29617570	29617752	(103657557)	C	L2a	LINE/L2	(91)	3335	3106	822602
13	16.4	0.0	7.5	chr12	29783878	29783917	(103491392)	+	(CCG)n	Simple_repeat	1	40	(0)	822853
38	2.5	2.4	0.0	chr12	29856133	29856173	(103419136)	+	(GA)n	Simple_repeat	1	42	(0)	822935
957	18.5	0.0	0.0	chr12	30047435	30047612	(103227697)	+	MLT2B2	LTR/ERVL	6	183	(332)	823202
999	20.9	1.1	7.7	chr12	30047725	30048136	(103227173)	+	MLT2B2	LTR/ERVL	186	562	(0)	823202
40	6.2	0.0	0.0	chr12	30819035	30819085	(102456224)	+	(GA)n	Simple_repeat	1	51	(0)	824244
24	19.7	0.0	0.0	chr12	30914479	30914530	(102360779)	+	(CTCT)n	Simple_repeat	1	52	(0)	824385
198	31.2	0.0	0.0	chr12	30914531	30914594	(102360715)	+	MIR3	SINE/MIR	110	173	(35)	824386
15	16.9	4.0	3.9	chr12	30926679	30926728	(102348581)	+	G-rich	Low_complexity	1	52	(0)	824408
51	0.0	0.0	0.0	chr12	31031572	31031615	(102243694)	+	(CT)n	Simple_repeat	1	44	(0)	824574
34	0.0	0.0	0.0	chr12	31031616	31031652	(102243657)	+	(GT)n	Simple_repeat	1	37	(0)	824575
407	35.0	10.6	8.4	chr12	31117578	31118801	(102156508)	C	L1MDa	LINE/L1	(5629)	1004	402	824695
43	5.4	0.0	3.2	chr12	31184017	31184078	(102091231)	+	(CCTT)n	Simple_repeat	1	62	(0)	824787
35	13.5	2.1	6.3	chr12	31184079	31184150	(102091159)	+	(TCTT)n	Simple_repeat	1	70	(0)	824788
2049	15.4	0.3	1.0	chr12	31184151	31184456	(102090853)	C	AluJb	SINE/Alu	(7)	305	2	824789
133	14.8	0.8	1.2	chr12	31255991	31256228	(102019081)	+	(CTTT)n	Simple_repeat	1	240	(0)	824892
1405	15.9	1.3	1.3	chr12	31256229	31256455	(102018854)	C	AluJb	SINE/Alu	(0)	312	86	824893
775	21.0	12.9	0.5	chr12	31485553	31485649	(101789660)	C	MER58A	DNA/hAT-Charlie	(101)	123	2	825365
420	34.3	6.4	3.2	chr12	31485650	31485732	(101789577)	+	MLT1G1	LTR/ERVL-MaLR	145	226	(353)	825364
31	0.0	3.3	0.0	chr12	31485733	31485762	(101789547)	+	(TC)n	Simple_repeat	1	31	(0)	825371
420	34.3	6.4	3.2	chr12	31485763	31486052	(101789257)	+	MLT1G1	LTR/ERVL-MaLR	227	530	(49)	825364
2072	13.2	0.3	6.3	chr12	31487955	31488272	(101787037)	C	AluSz	SINE/Alu	(11)	301	3	825375
844	29.4	3.4	0.4	chr12	31630023	31630254	(101645055)	C	MIR	SINE/MIR	(18)	244	6	825670
361	23.2	9.7	1.8	chr12	31630395	31630508	(101644801)	+	MER34B	LTR/ERV1	1	124	(441)	825671
1815	22.1	10.0	4.2	chr12	31749069	31749596	(101525713)	C	LTR8B	LTR/ERV1	(0)	820	259	825964
660	24.0	3.9	1.2	chr12	31959044	31959216	(101316093)	+	MER5A	DNA/hAT-Charlie	12	189	(0)	826461
12	20.9	0.0	4.8	chr12	31959362	31959403	(101315906)	+	(CTGGTC)n	Simple_repeat	1	42	(0)	826462
647	19.0	0.0	0.0	chr12	32033325	32033440	(101241869)	+	BLACKJACK	DNA/hAT-Blackjack	114	229	(2740)	826638
15	9.8	0.0	0.0	chr12	32033441	32033462	(101241847)	+	(TC)n	Simple_repeat	1	22	(0)	826639
755	19.0	0.0	0.0	chr12	32033465	32033585	(101241724)	C	FLAM_A	SINE/Alu	(20)	122	2	826640
571	26.8	0.6	5.6	chr12	32033615	32033792	(101241517)	+	BLACKJACK	DNA/hAT-Blackjack	284	452	(2517)	826641
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
29	0.0	0.0	0.0	chr12	32898421	32898445	(100376864)	+	(TC)n	Simple_repeat	1	25	(0)	828311
2142	10.6	14.0	2.1	chr12	32982391	32982570	(100292739)	C	MSTA	LTR/ERVL-MaLR	(0)	428	206	828474
65	1.7	0.0	0.0	chr12	32982571	32982630	(100292679)	+	(GA)n	Simple_repeat	1	60	(0)	828475
2142	10.6	14.0	2.1	chr12	32982631	32982825	(100292484)	C	MSTA	LTR/ERVL-MaLR	(223)	205	1	828474
301	26.4	16.9	1.3	chr12	33974836	33974985	(99300324)	+	L1MEd	LINE/L1	1051	1228	(5858)	829664
161	27.3	0.2	0.2	chr12	38052236	38052659	(95222650)	+	GA-rich	Low_complexity	1	425	(0)	830601
311	28.1	5.9	8.1	chr12	38268686	38268859	(95006450)	+	L1MEd	LINE/L1	1045	1214	(5872)	830880
34	17.1	0.0	2.9	chr12	38764848	38764916	(94510393)	+	GA-rich	Low_complexity	1	69	(0)	831523
31	0.0	0.0	0.0	chr12	38867306	38867339	(94407970)	+	(GT)n	Simple_repeat	1	34	(0)	831639
51	2.1	0.0	0.0	chr12	38867340	38867387	(94407922)	+	(GA)n	Simple_repeat	1	48	(0)	831640
62	0.0	0.0	0.0	chr12	38894659	38894711	(94380598)	+	(CT)n	Simple_repeat	1	53	(0)	831680
3650	18.0	4.0	7.9	chr12	39270102	39270927	(94004382)	C	MER54B	LTR/ERVL	(0)	793	1	832173
376	29.9	14.8	2.1	chr12	39780094	39780281	(93495028)	C	MIRc	SINE/MIR	(14)	254	39	832873
1021	28.5	10.7	2.8	chr12	40058681	40059142	(93216167)	+	L5	LINE/RTE-X	234	736	(1529)	833239
5785	10.2	1.4	0.7	chr12	40385278	40386130	(92889179)	+	HERV17-int	LTR/ERV1	703	1536	(7090)	833718
1751	22.8	7.2	11.1	chr12	41394441	41395008	(91880301)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	26	834990
5209	26.4	6.0	0.6	chr12	41395023	41396397	(91878912)	C	MLT1F1-int	LTR/ERVL-MaLR	(0)	1489	33	834990
51	8.9	3.0	2.0	chr12	41408759	41408857	(91866452)	+	(TC)n	Simple_repeat	1	102	(0)	835003
18	17.3	0.0	0.0	chr12	41571121	41571159	(91704150)	+	(CTATAT)n	Simple_repeat	1	39	(0)	835218
49	0.0	0.0	0.0	chr12	41571336	41571377	(91703932)	+	(TC)n	Simple_repeat	1	42	(0)	835219
30	7.5	0.0	2.3	chr12	41571378	41571421	(91703888)	+	(AC)n	Simple_repeat	1	44	(0)	835220
22	22.6	4.6	0.0	chr12	41571422	41571442	(91703867)	+	(ACAT)n	Simple_repeat	1	68	(0)	835221
313	10.0	11.1	5.9	chr12	41934974	41935058	(91340251)	+	MLT1B	LTR/ERVL-MaLR	95	184	(206)	835716
26	8.7	5.9	4.2	chr12	41935063	41935126	(91340183)	+	(TCTCTCC)n	Simple_repeat	1	65	(0)	835717
48	0.0	0.0	0.0	chr12	41935127	41935167	(91340142)	+	(CT)n	Simple_repeat	1	41	(0)	835718
324	27.5	6.2	0.0	chr12	41935174	41935264	(91340045)	+	MLT1B	LTR/ERVL-MaLR	192	288	(102)	835716
2434	13.1	8.9	0.0	chr12	42052359	42052542	(91222767)	+	MSTA	LTR/ERVL-MaLR	1	206	(222)	835926
31	6.8	2.1	2.0	chr12	42052543	42052590	(91222719)	+	(CT)n	Simple_repeat	1	49	(0)	835927
2434	13.1	8.9	0.0	chr12	42052591	42052795	(91222514)	+	MSTA	LTR/ERVL-MaLR	207	427	(1)	835926
1976	19.3	0.5	2.5	chr12	42172635	42173032	(91102277)	+	L1MB8	LINE/L1	5640	6029	(149)	836125
36	8.6	0.0	0.0	chr12	42173033	42173082	(91102227)	+	(AG)n	Simple_repeat	1	50	(0)	836126
800	19.5	0.8	0.0	chr12	42173111	42173238	(91102071)	C	FRAM	SINE/Alu	(30)	146	18	836127
659	16.1	0.0	0.0	chr12	42400576	42400668	(90874641)	C	AluJr	SINE/Alu	(213)	99	7	836570
40	2.6	0.0	0.0	chr12	42400758	42400796	(90874513)	+	(TC)n	Simple_repeat	1	39	(0)	836571
41	0.0	0.0	0.0	chr12	42400799	42400833	(90874476)	+	(CA)n	Simple_repeat	1	35	(0)	836572
30	0.0	0.0	0.0	chr12	42495207	42495235	(90780074)	+	(AAAAC)n	Simple_repeat	1	29	(0)	836724
1673	16.7	6.0	0.7	chr12	42495236	42495401	(90779908)	+	AluJb	SINE/Alu	122	303	(9)	836723
1491	14.2	3.3	11.5	chr12	42495402	42495530	(90779779)	C	AluJr4	SINE/Alu	(205)	107	2	836722
15290	11.6	4.1	2.1	chr12	42495531	42495586	(90779723)	C	Tigger1	DNA/TcMar-Tigger	(674)	1744	1689	836720
195	33.8	0.0	1.5	chr12	43105749	43105814	(90169495)	+	MamSINE1	SINE/tRNA-RTE	25	89	(201)	837615
11281	8.5	0.8	0.2	chr12	43192291	43194598	(90080711)	C	L1PB1	LINE/L1	(3)	6148	3829	837740
50	2.2	0.0	0.0	chr12	43634295	43634341	(89640968)	+	(CT)n	Simple_repeat	1	47	(0)	838320
12	16.5	0.0	0.0	chr12	43835773	43835799	(89439510)	+	(CGGCC)n	Simple_repeat	1	27	(0)	838633
14	18.5	4.8	6.2	chr12	43835973	43836034	(89439275)	+	(GCG)n	Simple_repeat	1	65	(0)	838634
59	0.0	0.0	0.0	chr12	44517372	44517421	(88757888)	+	(TC)n	Simple_repeat	1	50	(0)	839545
723	15.8	5.0	0.0	chr12	44517446	44517578	(88757731)	+	MSTA	LTR/ERVL-MaLR	289	428	(0)	839546
19	12.8	2.9	0.0	chr12	44877134	44877167	(88398142)	+	GA-rich	Low_complexity	1	35	(0)	840017
12	9.7	0.0	0.0	chr12	44877167	44877188	(88398121)	+	(AAAT)n	Simple_repeat	1	22	(0)	840018
2159	13.3	0.3	0.3	chr12	45661758	45662057	(87613252)	+	AluSx	SINE/Alu	1	300	(12)	841167
1002	21.3	7.3	6.2	chr12	45662058	45662311	(87612998)	+	MLT1D	LTR/ERVL-MaLR	245	501	(4)	841166
23	3.7	0.0	0.0	chr12	45857742	45857769	(87417540)	+	(TC)n	Simple_repeat	1	28	(0)	841495
2080	15.2	0.0	0.0	chr12	45857770	45858059	(87417250)	C	AluJb	SINE/Alu	(22)	290	1	841496
342	27.7	5.9	2.6	chr12	45912871	45912985	(87362324)	+	MIRb	SINE/MIR	128	246	(22)	841582
2415	20.0	2.4	10.2	chr12	46133998	46134547	(87140762)	C	LTR80B	LTR/ERVL	(77)	507	3	841874
2388	9.7	5.2	0.8	chr12	46150879	46151242	(87124067)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	841899
4764	11.0	4.7	3.3	chr12	46256187	46256602	(87018707)	C	MER41-int	LTR/ERV1	(2888)	3058	2765	842028
21	0.0	0.0	0.0	chr12	46256614	46256636	(87018673)	+	(CA)n	Simple_repeat	1	23	(0)	842030
29	0.0	0.0	0.0	chr12	46256637	46256661	(87018648)	+	(AG)n	Simple_repeat	1	25	(0)	842031
5016	12.8	14.7	1.6	chr12	46256662	46257596	(87017713)	C	MER41-int	LTR/ERV1	(4867)	1079	1	842028
11	22.1	3.9	3.8	chr12	46383051	46383101	(86892208)	+	(GCGGAG)n	Simple_repeat	1	53	(0)	842182
35	33.0	2.9	0.0	chr12	47065461	47065597	(86209712)	+	GA-rich	Low_complexity	1	141	(0)	843061
12	18.3	2.4	2.4	chr12	47080763	47080787	(86194522)	+	(TTCTCTC)n	Simple_repeat	1	26	(0)	843080
30	7.5	5.1	1.6	chr12	47080788	47080846	(86194463)	+	(CT)n	Simple_repeat	1	62	(0)	843081
12	18.3	2.4	2.4	chr12	47080847	47080861	(86194448)	+	(TTCTCTC)n	Simple_repeat	6	19	(0)	843082
663	31.2	0.0	4.4	chr12	47541705	47541903	(85733406)	+	MLT1F	LTR/ERVL-MaLR	1	189	(359)	843831
47	0.0	0.0	0.0	chr12	47541904	47541943	(85733366)	+	(TC)n	Simple_repeat	1	40	(0)	843832
663	31.2	0.0	4.4	chr12	47541944	47541991	(85733318)	+	MLT1F	LTR/ERVL-MaLR	190	237	(311)	843831
38	0.0	0.0	0.0	chr12	47728253	47728285	(85547024)	+	(AC)n	Simple_repeat	1	33	(0)	844101
38	0.0	0.0	0.0	chr12	47728289	47728321	(85546988)	+	(AG)n	Simple_repeat	1	33	(0)	844102
869	28.0	15.9	2.5	chr12	47768277	47768548	(85506761)	C	L2b	LINE/L2	(607)	2812	2520	844164
15	11.8	5.1	2.4	chr12	47773453	47773491	(85501818)	+	G-rich	Low_complexity	1	41	(0)	844181
207	26.1	11.5	1.4	chr12	47810661	47810730	(85464579)	+	MIRc	SINE/MIR	171	248	(20)	844232
57	5.0	0.0	0.0	chr12	47810805	47810866	(85464443)	+	(TC)n	Simple_repeat	1	62	(0)	844233
2338	10.4	0.0	0.0	chr12	48103931	48104227	(85171082)	+	AluSg	SINE/Alu	1	297	(13)	844706
32	19.5	1.4	1.4	chr12	48104235	48104256	(85171053)	+	GA-rich	Low_complexity	1	36	(34)	844707
19	11.7	0.0	0.0	chr12	48104257	48104284	(85171025)	+	(G)n	Simple_repeat	1	28	(0)	844708
32	19.5	1.4	1.4	chr12	48104285	48104303	(85171006)	+	GA-rich	Low_complexity	37	70	(0)	844707
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
34	9.1	0.0	0.0	chr12	49004766	49004812	(84270497)	+	(AG)n	Simple_repeat	1	47	(0)	846244
57	0.0	0.0	0.0	chr12	49004814	49004862	(84270447)	+	(TG)n	Simple_repeat	1	49	(0)	846245
1892	11.2	0.0	0.0	chr12	49134857	49135105	(84140204)	C	AluSc	SINE/Alu	(11)	298	50	846454
277	18.0	2.0	0.0	chr12	49135113	49135162	(84140147)	C	MER66-int	LTR/ERV1	(80)	6596	6546	846449
53	8.9	2.4	0.0	chr12	49135171	49135254	(84140055)	+	(AT)n	Simple_repeat	1	86	(0)	846455
44	10.5	2.7	0.0	chr12	49191672	49191745	(84083564)	+	(TTTC)n	Simple_repeat	1	76	(0)	846618
2289	12.3	0.3	0.0	chr12	49191746	49192054	(84083255)	C	AluSx1	SINE/Alu	(2)	310	1	846619
41	16.1	0.0	0.0	chr12	49222708	49222777	(84052532)	+	GA-rich	Low_complexity	1	70	(0)	846714
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
2392	7.2	0.0	0.0	chr12	49234824	49235115	(84040194)	C	AluSq4	SINE/Alu	(19)	292	1	846739
2367	10.3	0.3	0.0	chr12	49320564	49320873	(83954436)	+	AluSx1	SINE/Alu	1	311	(1)	846964
59	17.7	4.4	0.8	chr12	49320874	49320989	(83954320)	+	GA-rich	Low_complexity	1	120	(0)	846965
22	21.4	1.3	6.2	chr12	49367401	49367479	(83907830)	+	(GGC)n	Simple_repeat	1	80	(0)	847046
17	20.5	0.0	9.5	chr12	49623347	49623420	(83651889)	+	G-rich	Low_complexity	1	74	(0)	847520
17	16.3	6.8	3.2	chr12	49707425	49707483	(83567826)	+	(CCGCG)n	Simple_repeat	1	63	(0)	847645
13	29.6	0.0	3.5	chr12	49707465	49707521	(83567788)	+	(CCCT)n	Simple_repeat	1	57	(0)	847646
1693	16.2	2.6	0.0	chr12	49719231	49719496	(83555813)	+	AluJr	SINE/Alu	1	273	(39)	847672
105	25.3	2.6	0.0	chr12	49719497	49719766	(83555543)	+	GA-rich	Low_complexity	1	277	(0)	847673
2344	10.3	0.0	0.6	chr12	49719772	49720082	(83555227)	+	AluSx	SINE/Alu	1	309	(3)	847674
5502	7.7	2.7	0.6	chr12	49734957	49736004	(83539305)	+	Harlequin-int	LTR/ERV1	263	1410	(5486)	847711
100	16.8	3.6	1.7	chr12	50135086	50135308	(83140001)	+	GA-rich	Low_complexity	1	231	(0)	848486
49	0.0	0.0	0.0	chr12	50135309	50135350	(83139959)	+	(GT)n	Simple_repeat	1	42	(0)	848487
12	14.0	7.3	2.3	chr12	50167052	50167092	(83108217)	+	(GCCCCCG)n	Simple_repeat	1	44	(0)	848566
2248	11.4	0.0	2.2	chr12	50383308	50383622	(82891687)	+	AluSx3	SINE/Alu	1	308	(3)	849085
2672	7.6	0.0	1.3	chr12	50445991	50446305	(82829004)	C	AluY	SINE/Alu	(0)	311	1	849249
90	1.2	0.0	0.0	chr12	50446330	50446410	(82828899)	+	(TC)n	Simple_repeat	1	81	(0)	849250
1885	20.7	0.5	3.4	chr12	50515927	50516213	(82759096)	C	MLT1A0	LTR/ERVL-MaLR	(0)	432	83	849401
46	7.4	0.0	0.0	chr12	50516214	50516270	(82759039)	+	(TC)n	Simple_repeat	1	57	(0)	849402
1827	15.9	0.7	0.0	chr12	50516276	50516551	(82758758)	C	AluJr	SINE/Alu	(32)	280	3	849403
29	12.5	1.8	1.8	chr12	50589985	50590016	(82685293)	+	(TC)n	Simple_repeat	1	32	(0)	849578
1384	19.7	2.7	2.3	chr12	50590017	50590275	(82685034)	C	AluJo	SINE/Alu	(29)	283	24	849579
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
32	0.0	0.0	0.0	chr12	51248400	51248434	(82026875)	+	(AC)n	Simple_repeat	1	35	(0)	850930
49	0.0	0.0	0.0	chr12	51248435	51248476	(82026833)	+	(CT)n	Simple_repeat	1	42	(0)	850931
2371	18.3	6.9	3.7	chr12	51248478	51248770	(82026539)	+	MER21A	LTR/ERVL	24	435	(496)	850932
20	16.4	0.0	5.7	chr12	51391449	51391501	(81883808)	+	GA-rich	Low_complexity	1	53	(0)	851261
9725	23.5	5.9	5.1	chr12	51586112	51586295	(81689014)	+	L1ME1	LINE/L1	3259	3443	(2876)	851593
45	2.4	0.0	0.0	chr12	51586296	51586338	(81688971)	+	(AG)n	Simple_repeat	1	43	(0)	851604
9725	23.5	5.9	5.1	chr12	51586339	51586551	(81688758)	+	L1ME1	LINE/L1	3444	3674	(2645)	851593
13	14.8	5.1	2.4	chr12	51847018	51847056	(81428253)	+	(CCCG)n	Simple_repeat	1	41	(0)	851994
17	24.4	0.0	4.8	chr12	53180926	53180988	(80094321)	+	G-rich	Low_complexity	1	63	(0)	854225
53	9.4	5.4	3.4	chr12	53222214	53222325	(80052984)	+	A-rich	Low_complexity	1	118	(0)	854284
1927	13.7	3.0	2.0	chr12	53405383	53405682	(79869627)	+	AluSx	SINE/Alu	1	303	(9)	854689
17	28.7	1.8	0.0	chr12	53405683	53405737	(79869572)	+	GA-rich	Low_complexity	1	56	(0)	854690
326	28.1	2.2	2.9	chr12	53405738	53405863	(79869446)	C	L1ME4b	LINE/L1	(616)	276	194	854691
1156	4.1	2.7	0.0	chr12	53405864	53406008	(79869301)	+	L1PA4	LINE/L1	6006	6154	(1)	854692
23	14.9	0.0	0.0	chr12	53568401	53568438	(79706871)	+	(CT)n	Simple_repeat	1	38	(0)	854997
440	28.1	8.2	0.7	chr12	53601418	53601553	(79673756)	+	UCON62	DNA?	1	147	(30)	855057
49	0.0	0.0	0.0	chr12	53679239	53679280	(79596029)	+	(GA)n	Simple_repeat	1	42	(0)	855242
701	27.5	4.0	1.0	chr12	53679412	53679606	(79595703)	+	MIR3	SINE/MIR	1	201	(7)	855243
28	25.1	0.0	1.3	chr12	53938973	53939049	(79336260)	+	(GCG)n	Simple_repeat	1	77	(0)	855693
12	20.7	4.7	2.2	chr12	53964393	53964435	(79310874)	+	G-rich	Low_complexity	1	45	(0)	855716
18	19.8	9.2	4.6	chr12	53966206	53966328	(79308981)	+	(TCCCTCTC)n	Simple_repeat	1	128	(0)	855718
17	18.4	0.0	0.0	chr12	53973817	53973853	(79301456)	+	(GGCGGA)n	Simple_repeat	1	37	(0)	855721
23	17.1	4.2	4.0	chr12	53973947	53974017	(79301292)	+	G-rich	Low_complexity	1	74	(0)	855722
13	29.7	5.6	0.0	chr12	53995957	53996027	(79279282)	+	G-rich	Low_complexity	1	75	(0)	855739
17	12.9	4.3	4.2	chr12	54002022	54002067	(79273242)	+	GA-rich	Low_complexity	1	48	(0)	855742
16	15.8	2.8	0.0	chr12	54008755	54008790	(79266519)	+	(CCCCT)n	Simple_repeat	1	37	(0)	855745
68	0.0	0.0	0.0	chr12	54008827	54008884	(79266425)	+	(TC)n	Simple_repeat	1	58	(0)	855746
39	0.0	0.0	6.1	chr12	54009025	54009073	(79266236)	+	(CGC)n	Simple_repeat	1	49	(0)	855747
79	0.9	10.0	0.0	chr12	54013946	54014055	(79261254)	+	(TC)n	Simple_repeat	1	121	(0)	855755
26	18.7	1.6	1.6	chr12	54017343	54017405	(79257904)	+	GA-rich	Low_complexity	1	64	(0)	855760
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
11	21.6	0.0	4.9	chr12	54018715	54018755	(79256554)	+	(ACGCAC)n	Simple_repeat	1	41	(0)	855762
18	17.5	0.0	0.0	chr12	54027559	54027591	(79247718)	+	(CT)n	Simple_repeat	1	33	(0)	855764
17	22.0	2.3	0.0	chr12	54032808	54032851	(79242458)	+	(TCCC)n	Simple_repeat	1	45	(0)	855768
184	22.7	4.3	0.0	chr12	54036527	54036570	(79238739)	+	L2c	LINE/L2	3333	3378	(9)	855770
16	0.0	0.0	0.0	chr12	54036676	54036693	(79238616)	+	(CT)n	Simple_repeat	1	18	(0)	855771
30	3.4	0.0	0.0	chr12	54083826	54083855	(79191454)	+	(AG)n	Simple_repeat	1	30	(0)	855842
14	29.9	1.6	1.6	chr12	54173413	54173475	(79101834)	+	(CGCGG)n	Simple_repeat	1	64	(0)	855981
15	15.5	2.6	2.6	chr12	54173660	54173697	(79101612)	+	(CGCC)n	Simple_repeat	1	39	(0)	855982
1929	14.4	0.3	5.0	chr12	54312819	54313138	(78962171)	+	AluSz	SINE/Alu	1	305	(7)	856229
60	18.7	1.5	1.5	chr12	54313139	54313269	(78962040)	+	A-rich	Low_complexity	1	133	(0)	856230
2399	9.0	0.3	0.0	chr12	54313291	54313589	(78961720)	C	AluSc8	SINE/Alu	(11)	300	1	856231
20	13.0	0.0	0.0	chr12	54419093	54419127	(78856182)	+	(GCA)n	Simple_repeat	1	35	(0)	856408
17	29.1	0.0	1.7	chr12	54419128	54419146	(78856163)	+	(GGCGGC)n	Simple_repeat	5	58	(0)	856409
63	2.9	2.9	0.0	chr12	55010526	55010595	(78264714)	+	(TC)n	Simple_repeat	1	72	(0)	857255
24	6.3	0.0	2.9	chr12	55010596	55010622	(78264687)	+	(TG)n	Simple_repeat	2	28	(0)	857256
48	31.8	4.5	1.8	chr12	55742749	55743013	(77532296)	+	(TC)n	Simple_repeat	1	277	(0)	858161
19	10.9	5.0	0.0	chr12	55745572	55745611	(77529698)	+	G-rich	Low_complexity	1	42	(0)	858164
17	14.0	0.0	0.0	chr12	55745711	55745771	(77529538)	+	(CCTCC)n	Simple_repeat	1	61	(0)	858165
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
36	19.9	2.1	7.6	chr12	56189476	56189616	(77085693)	+	(GCC)n	Simple_repeat	1	144	(0)	859049
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
2528	12.3	9.2	13.9	chr12	56756360	56756559	(76518750)	C	MER75	DNA/PiggyBac	(2)	512	385	860194
2172	13.5	0.0	0.0	chr12	56756560	56756863	(76518446)	C	AluSx1	SINE/Alu	(8)	304	1	860195
132	17.9	1.2	0.0	chr12	56854819	56855064	(76420245)	+	(AT)n	Simple_repeat	1	249	(0)	860378
30	7.7	0.0	0.0	chr12	56855064	56855104	(76420205)	+	(AG)n	Simple_repeat	1	41	(0)	860379
2197	13.1	0.0	0.3	chr12	56855105	56855387	(76419922)	C	AluSz	SINE/Alu	(30)	282	1	860380
41	0.0	0.0	0.0	chr12	57551873	57551907	(75723402)	+	(TC)n	Simple_repeat	1	35	(0)	861498
12	13.7	6.2	0.0	chr12	57611743	57611774	(75663535)	+	(CCTC)n	Simple_repeat	1	34	(0)	861582
13	8.5	0.0	3.7	chr12	57611811	57611837	(75663472)	+	(CGCCC)n	Simple_repeat	1	27	(0)	861583
40	0.0	0.0	0.0	chr12	58619712	58619745	(74655564)	+	(TC)n	Simple_repeat	1	34	(0)	863032
41173	4.3	0.6	0.5	chr12	58852938	58858140	(74417169)	C	HERV17-int	LTR/ERV1	(2607)	6019	704	863331
96	6.1	7.2	1.4	chr12	58858141	58858334	(74416975)	+	(TC)n	Simple_repeat	1	208	(0)	863332
3705	7.6	6.9	0.1	chr12	58858335	58858993	(74416316)	C	HERV17-int	LTR/ERV1	(7923)	703	1	863331
1260	32.7	14.6	2.6	chr12	58901619	58901916	(74373393)	+	L3	LINE/CR1	3681	4011	(88)	863372
13	15.4	6.7	2.1	chr12	58925410	58925454	(74349855)	+	A-rich	Low_complexity	1	48	(0)	863400
47	4.0	0.0	1.9	chr12	59006977	59007030	(74268279)	+	(TC)n	Simple_repeat	1	54	(0)	863539
378	31.5	11.7	1.9	chr12	59007034	59007240	(74268069)	+	L2c	LINE/L2	3120	3349	(38)	863540
2886	17.8	0.4	9.5	chr12	62429735	62430290	(70845019)	C	MLT2B3	LTR/ERVL	(48)	506	1	867905
44	2.4	0.0	0.0	chr12	62433998	62434039	(70841270)	+	(TC)n	Simple_repeat	1	42	(0)	867912
2303	10.7	0.0	0.3	chr12	62434042	62434349	(70840960)	C	AluSz	SINE/Alu	(5)	307	1	867913
674	20.0	8.0	18.8	chr12	62614693	62614932	(70660377)	C	MER58C	DNA/hAT-Charlie	(0)	215	4	868211
36	8.8	0.0	0.0	chr12	62614972	62615020	(70660289)	+	(TC)n	Simple_repeat	1	49	(0)	868212
571	31.2	16.9	1.5	chr12	62702137	62702544	(70572765)	C	L3	LINE/CR1	(2737)	1362	870	868345
43	0.0	0.0	0.0	chr12	62702545	62702581	(70572728)	+	(AG)n	Simple_repeat	1	37	(0)	868352
571	31.2	16.9	1.5	chr12	62702582	62702640	(70572669)	C	L3	LINE/CR1	(3230)	869	809	868345
1704	18.9	0.0	1.8	chr12	62839779	62840043	(70435266)	+	AluJr	SINE/Alu	24	283	(29)	868559
47	4.2	0.0	0.0	chr12	62840044	62840092	(70435217)	+	(AG)n	Simple_repeat	1	49	(0)	868560
1704	18.9	0.0	1.8	chr12	62840093	62840107	(70435202)	+	AluJr	SINE/Alu	284	298	(14)	868559
1643	19.2	4.0	2.2	chr12	62840117	62840436	(70434873)	C	MLT1A0	LTR/ERVL-MaLR	(35)	330	5	868561
48	0.0	0.0	0.0	chr12	63021790	63021830	(70253479)	+	(GA)n	Simple_repeat	1	41	(0)	868850
75	21.1	0.7	0.0	chr12	63416898	63417051	(69858258)	+	GA-rich	Low_complexity	1	155	(0)	869380
20	29.6	1.7	0.0	chr12	63441883	63441942	(69833367)	+	(TA)n	Simple_repeat	1	61	(0)	869410
75	2.8	0.0	0.0	chr12	63441943	63442015	(69833294)	+	(AG)n	Simple_repeat	1	73	(0)	869411
278	19.8	1.1	7.5	chr12	63442023	63442115	(69833194)	+	MER3	DNA/hAT-Charlie	114	200	(9)	869412
2286	23.9	9.3	3.6	chr12	63442130	63443272	(69832037)	+	L1MEc	LINE/L1	2126	3337	(2982)	869413
1521	18.5	12.6	1.4	chr12	63828954	63829115	(69446194)	+	MSTD	LTR/ERVL-MaLR	1	172	(224)	869997
37	5.1	0.0	0.0	chr12	63829116	63829156	(69446153)	+	(TC)n	Simple_repeat	1	41	(0)	869998
1521	18.5	12.6	1.4	chr12	63829157	63829344	(69445965)	+	MSTD	LTR/ERVL-MaLR	173	396	(0)	869997
1711	17.0	0.0	0.0	chr12	63834081	63834321	(69440988)	C	AluJb	SINE/Alu	(31)	281	41	870007
34	0.0	0.0	0.0	chr12	63834402	63834430	(69440879)	+	(TC)n	Simple_repeat	1	29	(0)	870008
1263	16.5	1.4	4.1	chr12	63834453	63834670	(69440639)	C	AluJr	SINE/Alu	(100)	212	1	870009
12	16.1	5.7	0.0	chr12	63844435	63844469	(69430840)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	870032
21	17.9	1.8	3.6	chr12	63844633	63844687	(69430622)	+	(TCC)n	Simple_repeat	1	56	(0)	870033
17	12.0	2.6	2.6	chr12	64824593	64824630	(68450679)	+	(CGCT)n	Simple_repeat	1	39	(0)	871866
34	15.3	1.4	2.9	chr12	65118836	65118904	(68156405)	+	GA-rich	Low_complexity	1	70	(0)	872295
395	27.3	16.2	1.8	chr12	65266719	65266886	(68008423)	+	MIR	SINE/MIR	13	209	(53)	872554
110	16.1	1.3	3.0	chr12	65272314	65272543	(68002766)	+	(TTTC)n	Simple_repeat	1	233	(0)	872565
1532	18.8	4.6	2.4	chr12	65272546	65272843	(68002466)	C	AluJb	SINE/Alu	(6)	306	2	872566
53	14.1	4.5	0.9	chr12	65278446	65278556	(67996753)	+	GA-rich	Low_complexity	1	116	(0)	872573
11	21.5	4.4	2.1	chr12	65278562	65278606	(67996703)	+	(GGCGGCC)n	Simple_repeat	1	47	(0)	872574
29	3.2	0.0	0.0	chr12	65278805	65278836	(67996473)	+	(CTCTGC)n	Simple_repeat	1	32	(0)	872575
19	21.1	2.0	0.0	chr12	65278877	65278925	(67996384)	+	(CTCCC)n	Simple_repeat	1	50	(0)	872576
36	2.9	0.0	0.0	chr12	65533360	65533394	(67741915)	+	(CT)n	Simple_repeat	1	35	(0)	872929
440	35.9	7.0	5.0	chr12	65596447	65596863	(67678446)	C	L2c	LINE/L2	(38)	3349	2924	873021
804	31.8	1.9	2.6	chr12	65606635	65606902	(67668407)	+	MIRb	SINE/MIR	3	268	(0)	873035
389	31.5	2.9	9.1	chr12	65630588	65630807	(67644502)	+	L2c	LINE/L2	3182	3387	(0)	873077
19	3.9	0.0	0.0	chr12	65630826	65630852	(67644457)	+	(TGAA)n	Simple_repeat	1	27	(0)	873078
800	31.4	11.5	3.9	chr12	65738262	65738517	(67536792)	C	L2b	LINE/L2	(633)	2786	2529	873250
73	5.2	0.0	0.0	chr12	65738518	65738597	(67536712)	+	(TC)n	Simple_repeat	1	80	(0)	873253
1955	6.0	0.0	0.0	chr12	65738602	65738833	(67536476)	C	AluY	SINE/Alu	(39)	272	41	873254
815	27.5	6.9	3.0	chr12	66021210	66021573	(67253736)	+	L2a	LINE/L2	2969	3347	(79)	873684
28	14.5	0.0	0.0	chr12	66021621	66021666	(67253643)	+	(GA)n	Simple_repeat	1	46	(0)	873685
485	31.5	2.0	0.7	chr12	66093389	66093538	(67181771)	C	MIRb	SINE/MIR	(0)	268	117	873799
36	4.8	2.3	0.0	chr12	66104907	66104949	(67170360)	+	(TC)n	Simple_repeat	1	44	(0)	873815
18	30.7	0.0	0.0	chr12	66104950	66104996	(67170313)	+	(AC)n	Simple_repeat	1	47	(0)	873816
513	22.8	5.7	5.3	chr12	66155024	66155231	(67120078)	C	Tigger10	DNA/TcMar-Tigger	(77)	1767	1559	873891
478	18.8	0.0	0.0	chr12	66155231	66155310	(67119999)	C	FAM	SINE/Alu	(94)	91	12	873892
29	0.0	0.0	0.0	chr12	66155336	66155360	(67119949)	+	(GA)n	Simple_repeat	1	25	(0)	873893
1834	15.6	2.9	0.0	chr12	66155362	66155631	(67119678)	C	AluJb	SINE/Alu	(34)	278	1	873894
190	36.5	3.0	3.0	chr12	66319372	66319470	(66955839)	+	MIR	SINE/MIR	113	211	(51)	874207
415	29.4	3.4	13.0	chr12	66589021	66589162	(66686147)	+	MIRb	SINE/MIR	123	258	(10)	874590
51	5.5	0.0	0.0	chr12	66589195	66589251	(66686058)	+	(TC)n	Simple_repeat	1	57	(0)	874592
308	32.6	7.5	1.5	chr12	66715457	66715471	(66559838)	+	L2b	LINE/L2	3226	3240	(135)	874779
54	0.0	0.0	0.0	chr12	66715472	66715517	(66559792)	+	(GA)n	Simple_repeat	1	46	(0)	874780
308	32.6	7.5	1.5	chr12	66715518	66715638	(66559671)	+	L2b	LINE/L2	3241	3371	(4)	874779
26	24.5	2.7	0.0	chr12	66811593	66811666	(66463643)	+	(TCTC)n	Simple_repeat	1	76	(0)	874938
1926	18.3	0.0	1.0	chr12	66815481	66815792	(66459517)	+	AluJb	SINE/Alu	3	311	(1)	874946
50	9.0	0.0	0.0	chr12	66815821	66815893	(66459416)	+	(TTTC)n	Simple_repeat	1	73	(0)	874947
494	31.4	6.2	2.1	chr12	67040572	67040783	(66234526)	+	MIRb	SINE/MIR	31	260	(8)	875301
1493	19.8	4.7	5.4	chr12	67040786	67041154	(66234155)	+	MLT2D	LTR/ERVL	1	366	(48)	875302
66	36.7	0.5	0.0	chr12	67041170	67041393	(66233916)	+	(TA)n	Simple_repeat	1	225	(0)	875303
19	23.8	0.0	3.5	chr12	67069503	67069560	(66205749)	+	(CCT)n	Simple_repeat	1	58	(0)	875355
4813	15.9	1.4	4.7	chr12	67146295	67146510	(66128799)	+	MER6	DNA/TcMar-Tigger	50	242	(623)	875482
42	4.7	0.0	0.0	chr12	67146511	67146555	(66128754)	+	(GA)n	Simple_repeat	1	45	(0)	875484
4813	15.9	1.4	4.7	chr12	67146556	67147182	(66128127)	+	MER6	DNA/TcMar-Tigger	243	864	(1)	875482
402	28.0	1.6	2.3	chr12	67151985	67152112	(66123197)	+	MER5A	DNA/hAT-Charlie	60	186	(3)	875494
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
46	4.3	0.0	0.0	chr12	67463637	67463684	(65811625)	+	(GA)n	Simple_repeat	1	48	(0)	875955
33	3.1	0.0	0.0	chr12	68264861	68264893	(65010416)	+	(TC)n	Simple_repeat	1	33	(0)	877088
250	34.0	4.5	0.9	chr12	68266454	68266560	(65008749)	+	L2c	LINE/L2	3199	3309	(78)	877093
51	2.1	0.0	0.0	chr12	68266618	68266665	(65008644)	+	(TC)n	Simple_repeat	1	48	(0)	877094
25	23.8	0.0	0.0	chr12	69262480	69262543	(64012766)	+	(GAGACC)n	Simple_repeat	1	64	(0)	878992
15	21.6	0.0	0.0	chr12	69515555	69515586	(63759723)	+	(TC)n	Simple_repeat	1	32	(0)	879436
12	16.6	0.0	0.0	chr12	69515586	69515612	(63759697)	+	(CACA)n	Simple_repeat	1	27	(0)	879437
28	0.0	0.0	0.0	chr12	69568511	69568537	(63706772)	+	(CTGC)n	Simple_repeat	1	27	(0)	879530
48	7.1	0.0	0.0	chr12	69568556	69568614	(63706695)	+	(TC)n	Simple_repeat	1	59	(0)	879531
13	16.9	4.8	2.3	chr12	69739409	69739450	(63535859)	+	(GCGGC)n	Simple_repeat	1	44	(0)	879834
17786	14.6	4.3	0.7	chr12	70009944	70011631	(63263678)	+	L1M1	LINE/L1	15	1767	(5798)	880252
35	0.0	0.0	0.0	chr12	70011632	70011661	(63263648)	+	(AG)n	Simple_repeat	1	30	(0)	880253
17786	14.6	4.3	0.7	chr12	70011662	70013061	(63262248)	+	L1M1	LINE/L1	1768	3219	(4346)	880252
16	22.7	0.0	0.0	chr12	70308399	70308439	(62966870)	+	(CTCT)n	Simple_repeat	1	41	(0)	880708
35	0.0	0.0	0.0	chr12	70308556	70308585	(62966724)	+	(TC)n	Simple_repeat	1	30	(0)	880709
21	0.0	0.0	0.0	chr12	70308586	70308608	(62966701)	+	(AC)n	Simple_repeat	1	23	(0)	880710
1559	19.7	3.7	0.4	chr12	70730551	70730814	(62544495)	+	AluJr4	SINE/Alu	1	273	(39)	881344
102	16.1	3.6	7.2	chr12	70730826	70731159	(62544150)	+	GA-rich	Low_complexity	1	346	(0)	881345
355	33.7	5.1	3.5	chr12	71691974	71692145	(61583164)	+	MIRc	SINE/MIR	60	234	(34)	882680
896	20.0	0.7	0.0	chr12	71698458	71698602	(61576707)	+	AluJr	SINE/Alu	137	282	(30)	882695
62	0.0	0.0	0.0	chr12	71698608	71698660	(61576649)	+	(AG)n	Simple_repeat	1	53	(0)	882696
219	13.9	2.7	0.0	chr12	71698662	71698697	(61576612)	C	MIR	SINE/MIR	(192)	70	34	882697
525	19.6	0.0	2.9	chr12	71983635	71983739	(61291570)	C	MER54B	LTR/ERVL	(398)	395	294	883190
25	17.8	0.0	0.0	chr12	71983740	71983784	(61291525)	+	GA-rich	Low_complexity	1	45	(0)	883191
507	22.8	12.1	3.6	chr12	71983785	71983980	(61291329)	C	MER54B	LTR/ERVL	(467)	326	112	883190
41	0.0	0.0	0.0	chr12	74568027	74568061	(58707248)	+	(GA)n	Simple_repeat	1	35	(0)	886364
2082	23.1	5.5	1.4	chr12	74568062	74568275	(58707034)	C	MLT2B3	LTR/ERVL	(333)	383	163	886361
247	30.8	1.5	0.0	chr12	74846287	74846351	(58428958)	C	MLT1J2	LTR/ERVL-MaLR	(287)	161	96	886767
12	21.8	0.0	10.4	chr12	74846427	74846442	(58428867)	+	A-rich	Low_complexity	1	44	(23)	886768
32	9.6	0.0	0.0	chr12	74846443	74846487	(58428822)	+	(GA)n	Simple_repeat	1	45	(0)	886769
45	2.4	0.0	0.0	chr12	74978247	74978289	(58297020)	+	(AG)n	Simple_repeat	1	43	(0)	886934
58	9.2	3.8	5.8	chr12	74978327	74978458	(58296851)	+	GA-rich	Low_complexity	1	137	(0)	886935
2016	15.5	0.0	0.3	chr12	75406479	75406774	(57868535)	+	AluJb	SINE/Alu	5	299	(13)	887493
23	3.7	0.0	0.0	chr12	75406775	75406802	(57868507)	+	(GA)n	Simple_repeat	1	28	(0)	887494
1835	18.1	6.2	7.6	chr12	75406822	75407294	(57868015)	+	MER31B	LTR/ERV1	1	466	(0)	887495
389	30.7	12.2	1.8	chr12	75480100	75480268	(57795041)	C	MIRc	SINE/MIR	(63)	205	17	887592
39	6.8	0.0	0.0	chr12	75480286	75480332	(57794977)	+	(CT)n	Simple_repeat	1	47	(0)	887593
23	3.7	0.0	0.0	chr12	75480333	75480360	(57794949)	+	(AC)n	Simple_repeat	1	28	(0)	887594
35	12.1	0.0	3.0	chr12	75939636	75939702	(57335607)	+	(TGTCTC)n	Simple_repeat	1	67	(0)	888341
809	18.9	22.1	4.7	chr12	75939751	75940013	(57335296)	C	AluJo	SINE/Alu	(0)	312	1	888342
1387	25.9	11.2	1.2	chr12	76387826	76388427	(56886882)	C	L1MC5	LINE/L1	(1796)	7508	6839	889158
372	31.0	6.5	4.4	chr12	76388565	76388790	(56886519)	C	L1MC5a	LINE/L1	(2546)	231	1	889159
710	32.7	11.6	5.2	chr12	76676275	76676420	(56598889)	C	L2a	LINE/L2	(24)	3402	3267	889661
57	3.5	0.0	0.0	chr12	76676421	76676478	(56598831)	+	(TC)n	Simple_repeat	1	58	(0)	889663
1949	12.6	0.0	0.4	chr12	76676483	76676744	(56598565)	C	AluSx1	SINE/Alu	(36)	276	16	889664
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
18	15.6	0.0	0.0	chr12	77325016	77325051	(55950258)	+	(CCGCTC)n	Simple_repeat	1	36	(0)	890696
929	24.3	6.8	4.9	chr12	77562901	77563246	(55712063)	+	L1ME3	LINE/L1	5802	6154	(8)	890992
59	3.1	3.0	0.0	chr12	77563290	77563355	(55711954)	+	(CT)n	Simple_repeat	1	68	(0)	890993
1999	13.5	3.5	0.0	chr12	77563359	77563632	(55711677)	C	AluSc8	SINE/Alu	(27)	284	1	890994
84	3.6	0.0	0.0	chr12	77831152	77831236	(55444073)	+	(AG)n	Simple_repeat	1	85	(0)	891343
52	6.4	1.5	0.0	chr12	79890878	79890943	(53384366)	+	(AC)n	Simple_repeat	1	67	(0)	894205
24	9.4	0.0	0.0	chr12	79890945	79890978	(53384331)	+	(TC)n	Simple_repeat	1	34	(0)	894206
521	30.7	9.8	9.4	chr12	79890985	79891398	(53383911)	+	Tigger20a	DNA/TcMar-Tigger	171	586	(387)	894207
847	23.6	11.9	18.2	chr12	79972934	79973792	(53301517)	+	L1MC5a	LINE/L1	7107	7495	(547)	894355
57	7.1	3.3	1.1	chr12	80641844	80641934	(52633375)	+	(TC)n	Simple_repeat	1	94	(0)	895278
52	1.8	3.6	0.0	chr12	80976358	80976413	(52298896)	+	(CT)n	Simple_repeat	1	58	(0)	895782
30	0.0	0.0	0.0	chr12	80976414	80976446	(52298863)	+	(GT)n	Simple_repeat	1	33	(0)	895783
19	4.3	0.0	0.0	chr12	80976446	80976469	(52298840)	+	(GA)n	Simple_repeat	1	24	(0)	895784
41	0.0	0.0	0.0	chr12	81430525	81430559	(51844750)	+	(CT)n	Simple_repeat	1	35	(0)	896389
57	1.9	0.0	0.0	chr12	82564875	82564927	(50710382)	+	(GA)n	Simple_repeat	1	53	(0)	897933
1766	15.4	6.3	1.4	chr12	82564928	82565109	(50710200)	C	THE1D	LTR/ERVL-MaLR	(189)	192	1	897932
57	15.0	1.8	0.9	chr12	82672949	82673057	(50602252)	+	(CTCTTC)n	Simple_repeat	1	111	(0)	898072
34	2.5	2.4	2.3	chr12	82673059	82673100	(50602209)	+	(TC)n	Simple_repeat	1	43	(0)	898073
306	27.9	6.4	2.6	chr12	82673183	82673333	(50601976)	C	AmnSINE1	SINE/5S-Deu-L2	(124)	451	295	898074
32	0.0	0.0	0.0	chr12	82686970	82686999	(50588310)	+	(GCTGGG)n	Simple_repeat	1	30	(0)	898090
305	22.9	6.7	1.2	chr12	82862242	82862325	(50412984)	C	UCON73	Unknown	(3)	102	14	898369
53	5.4	0.0	0.0	chr12	82918715	82918773	(50356536)	+	(TC)n	Simple_repeat	1	59	(0)	898446
2385	10.7	0.0	0.3	chr12	82918774	82919055	(50356254)	C	AluSx4	SINE/Alu	(28)	282	1	898445
41	2.5	0.0	0.0	chr12	84629930	84629969	(48645340)	+	(GA)n	Simple_repeat	1	40	(0)	900512
566	29.7	9.6	8.3	chr12	84904003	84904224	(48371085)	+	MLT1H2	LTR/ERVL-MaLR	100	310	(239)	900910
30	0.0	0.0	0.0	chr12	84904225	84904250	(48371059)	+	(GA)n	Simple_repeat	1	26	(0)	900911
602	23.8	9.9	2.6	chr12	84904251	84904471	(48370838)	+	MLT1H2	LTR/ERVL-MaLR	311	549	(0)	900910
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
13	11.7	3.6	0.0	chr12	85834598	85834625	(47440684)	+	A-rich	Low_complexity	1	29	(0)	902176
87	12.7	1.3	1.3	chr12	86376767	86376915	(46898394)	+	GA-rich	Low_complexity	1	151	(0)	902870
43	2.5	0.0	0.0	chr12	89134205	89134245	(44141064)	+	(AC)n	Simple_repeat	1	41	(0)	906526
28	2.6	2.3	4.5	chr12	89134246	89134288	(44141021)	+	(GA)n	Simple_repeat	1	44	(0)	906527
46	0.0	0.0	0.0	chr12	89142885	89142923	(44132386)	+	(GA)n	Simple_repeat	1	39	(0)	906544
998	23.7	11.0	0.7	chr12	89143009	89143310	(44131999)	C	L1ME3B	LINE/L1	(108)	6134	5798	906545
1053	28.2	14.4	2.9	chr12	89164640	89164803	(44110506)	+	MLT1F2	LTR/ERVL-MaLR	3	172	(388)	906576
59	0.0	0.0	0.0	chr12	89164804	89164853	(44110456)	+	(TC)n	Simple_repeat	1	50	(0)	906577
1053	28.2	14.4	2.9	chr12	89164854	89165178	(44110131)	+	MLT1F2	LTR/ERVL-MaLR	173	558	(2)	906576
2947	27.4	8.1	6.6	chr12	89195116	89195578	(44079731)	+	L2a	LINE/L2	2649	3178	(248)	906622
38	8.3	0.0	0.0	chr12	89195579	89195629	(44079680)	+	(CT)n	Simple_repeat	1	51	(0)	906624
1058	27.1	7.9	7.9	chr12	89195630	89195647	(44079662)	+	L2a	LINE/L2	3179	3193	(233)	906622
34	0.0	3.0	0.0	chr12	89195648	89195680	(44079629)	+	(CA)n	Simple_repeat	1	34	(0)	906625
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
333	22.5	9.2	2.3	chr12	89658436	89658567	(43616742)	+	LTR79	LTR/ERVL	322	463	(64)	907390
60	1.8	0.0	0.0	chr12	89658599	89658654	(43616655)	+	(GA)n	Simple_repeat	1	56	(0)	907391
462	28.6	1.7	8.7	chr12	89947862	89948056	(43327253)	C	MIR3	SINE/MIR	(3)	205	25	907823
692	28.8	11.1	7.7	chr12	90247476	90247787	(43027522)	C	MLT1F1	LTR/ERVL-MaLR	(3)	486	188	908260
1799	24.6	9.9	13.2	chr12	92027287	92027991	(41247318)	C	L1MC5	LINE/L1	(1422)	7882	7203	910787
340	33.1	2.5	4.1	chr12	92447351	92447473	(40827836)	+	LTR78	LTR/ERV1	271	391	(913)	911561
60	1.8	0.0	0.0	chr12	92447491	92447546	(40827763)	+	(CT)n	Simple_repeat	1	56	(0)	911562
13	23.6	6.0	0.0	chr12	92929241	92929290	(40346019)	+	(GAGC)n	Simple_repeat	1	53	(0)	912350
2107	18.4	2.4	0.8	chr12	93016696	93017063	(40258246)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	912554
1072	22.0	2.0	3.6	chr12	93017356	93017605	(40257704)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	435	912557
24	3.6	0.0	0.0	chr12	93017640	93017668	(40257641)	+	(AG)n	Simple_repeat	1	29	(0)	912558
466	20.7	1.1	0.0	chr12	93017711	93017797	(40257512)	C	MLT1F2	LTR/ERVL-MaLR	(399)	161	74	912559
2287	10.9	0.3	0.0	chr12	93087051	93087352	(40187957)	+	AluSp	SINE/Alu	2	304	(9)	912697
364	25.8	8.1	8.9	chr12	93087353	93087565	(40187744)	C	MER110	LTR/ERV1	(202)	289	79	912695
603	29.9	7.7	1.4	chr12	93185497	93185703	(40089606)	C	MIRb	SINE/MIR	(29)	239	19	912899
20	0.0	0.0	0.0	chr12	93185724	93185745	(40089564)	+	(GT)n	Simple_repeat	1	22	(0)	912900
37	0.0	0.0	0.0	chr12	93185746	93185777	(40089532)	+	(GA)n	Simple_repeat	1	32	(0)	912901
186	30.8	15.2	0.8	chr12	93185795	93185912	(40089397)	C	L3	LINE/CR1	(1516)	2583	2446	912902
358	34.1	3.5	3.5	chr12	93185910	93186052	(40089257)	C	L2c	LINE/L2	(0)	3387	3245	912903
24233	11.7	3.0	5.3	chr12	93250873	93253674	(40021635)	C	HUERS-P1-int	LTR/ERV1	(2326)	3937	1227	913031
34	0.0	0.0	0.0	chr12	93253675	93253703	(40021606)	+	(AG)n	Simple_repeat	1	29	(0)	913035
24233	11.7	3.0	5.3	chr12	93253704	93254932	(40020377)	C	HUERS-P1-int	LTR/ERV1	(5037)	1226	2	913031
16	17.9	4.5	0.0	chr12	93316396	93316439	(39958870)	+	(CTAGTAC)n	Simple_repeat	1	46	(0)	913174
1823	16.4	1.6	4.1	chr12	93316690	93317006	(39958303)	C	AluJr	SINE/Alu	(3)	309	1	913175
92	11.5	2.5	1.2	chr12	93331202	93331313	(39943996)	+	GA-rich	Low_complexity	1	163	(0)	913211
22	24.1	0.0	0.0	chr12	93331314	93331360	(39943949)	+	A-rich	Low_complexity	1	47	(0)	913212
73	29.5	2.9	0.0	chr12	93368820	93369063	(39906246)	+	(CTCT)n	Simple_repeat	1	251	(0)	913302
49	0.0	0.0	0.0	chr12	93375485	93375526	(39899783)	+	(AG)n	Simple_repeat	1	42	(0)	913321
2485	15.6	16.2	0.0	chr12	93656509	93656547	(39618762)	C	MLT2B1	LTR/ERVL	(0)	520	453	913905
59	0.0	0.0	0.0	chr12	93656548	93656597	(39618712)	+	(GA)n	Simple_repeat	1	50	(0)	913906
2485	15.6	16.2	0.0	chr12	93656598	93656993	(39618316)	C	MLT2B1	LTR/ERVL	(68)	452	2	913905
46	2.3	0.0	0.0	chr12	94073901	94073944	(39201365)	+	(GA)n	Simple_repeat	1	44	(0)	914612
371	31.9	9.9	5.5	chr12	94132809	94133173	(39142136)	C	L2c	LINE/L2	(796)	2623	2241	914721
74	10.9	0.0	2.2	chr12	94133242	94133376	(39141933)	+	(TC)n	Simple_repeat	1	135	(0)	914726
1249	27.7	5.5	1.2	chr12	94472901	94473313	(38801996)	C	LTR16B1	LTR/ERVL	(3)	477	46	915244
37	4.4	2.0	2.0	chr12	94473314	94473362	(38801947)	+	(TC)n	Simple_repeat	1	50	(0)	915245
18	11.7	0.0	0.0	chr12	94594190	94594217	(38681092)	+	(TA)n	Simple_repeat	1	28	(0)	915471
15	0.0	0.0	0.0	chr12	94594217	94594233	(38681076)	+	(AC)n	Simple_repeat	1	17	(0)	915472
836	19.6	0.0	0.7	chr12	94594254	94594391	(38680918)	C	FRAM	SINE/Alu	(39)	137	1	915473
1646	12.8	0.0	1.3	chr12	94764006	94764240	(38511069)	+	AluSx1	SINE/Alu	48	279	(33)	915789
88	1.2	1.1	1.1	chr12	94764242	94764328	(38510981)	+	(GA)n	Simple_repeat	1	88	(0)	915790
1593	17.5	2.9	2.9	chr12	94832736	94833044	(38442265)	C	AluJb	SINE/Alu	(3)	309	1	915908
1468	22.5	9.2	5.0	chr12	94882102	94882639	(38392670)	+	HAL1b	LINE/L1	1587	2149	(272)	916003
38	2.8	0.0	0.0	chr12	94882664	94882700	(38392609)	+	(CT)n	Simple_repeat	1	37	(0)	916006
539	18.7	9.3	2.5	chr12	94882703	94882861	(38392448)	+	HAL1b	LINE/L1	2229	2399	(22)	916003
1889	19.4	0.3	0.0	chr12	94949523	94949831	(38325478)	+	AluJo	SINE/Alu	1	310	(2)	916172
51	14.4	0.0	0.0	chr12	94949832	94949917	(38325392)	+	(GAGA)n	Simple_repeat	1	86	(0)	916173
27	3.4	0.0	0.0	chr12	94949918	94949947	(38325362)	+	(AAGG)n	Simple_repeat	1	30	(0)	916174
2564	19.4	13.4	4.6	chr12	94949948	94950288	(38325021)	+	Arthur1	DNA/hAT-Tip100	3086	3490	(457)	916175
2192	11.0	0.3	0.7	chr12	95103545	95103835	(38171474)	C	AluSx	SINE/Alu	(22)	290	1	916509
2133	12.0	0.0	0.0	chr12	95239670	95239945	(38035364)	+	AluSz	SINE/Alu	1	276	(36)	916805
58	7.3	3.4	0.0	chr12	95239946	95240021	(38035288)	+	(GA)n	Simple_repeat	1	78	(0)	916806
61	0.0	0.0	0.0	chr12	95240022	95240076	(38035233)	+	(AAGG)n	Simple_repeat	1	55	(0)	916807
58	7.3	3.4	0.0	chr12	95240077	95240087	(38035222)	+	(GA)n	Simple_repeat	1	12	(0)	916808
1372	20.9	6.8	3.7	chr12	95248879	95249205	(38026104)	+	MER58B	DNA/hAT-Charlie	1	338	(3)	916828
373	22.0	0.0	1.1	chr12	95249212	95249303	(38026006)	+	Charlie15a	DNA/hAT-Charlie	123	213	(11)	916829
2224	12.8	0.3	1.6	chr12	95512425	95512729	(37762580)	+	AluSx	SINE/Alu	1	301	(11)	917374
2504	5.6	0.3	0.7	chr12	95567821	95568125	(37707184)	+	AluY	SINE/Alu	1	304	(7)	917476
18	4.3	0.0	3.9	chr12	95568143	95568160	(37707149)	+	(TC)n	Simple_repeat	1	18	(0)	917477
2084	12.1	0.0	7.2	chr12	95568161	95568491	(37706818)	C	AluSz	SINE/Alu	(5)	307	1	917478
2263	13.2	0.0	0.0	chr12	95670995	95671298	(37604011)	C	AluSx	SINE/Alu	(8)	304	1	917702
2032	13.7	0.0	10.6	chr12	95671319	95671695	(37603614)	+	MER1B	DNA/hAT-Charlie	1	337	(2)	917703
300	17.4	4.3	1.4	chr12	95836931	95837621	(37437688)	+	GA-rich	Low_complexity	1	721	(0)	917975
1628	19.0	4.3	0.0	chr12	95837625	95837893	(37437416)	+	AluJr	SINE/Alu	10	290	(22)	917976
28158	1.3	0.2	0.2	chr12	96315943	96321971	(36953338)	+	L1PA2	LINE/L1	124	6154	(1)	918842
56	0.0	0.0	0.0	chr12	96752086	96752133	(36523176)	+	(GA)n	Simple_repeat	1	48	(0)	919639
2016	20.2	6.0	7.0	chr12	98048733	98048955	(35226354)	+	MLT2B1	LTR/ERVL	1	227	(293)	921581
67	6.4	1.2	0.0	chr12	98048956	98049038	(35226271)	+	(TC)n	Simple_repeat	1	84	(0)	921582
649	2.8	0.0	0.0	chr12	98503503	98503574	(34771735)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	922374
258	33.7	10.1	1.6	chr12	98646487	98646676	(34628633)	+	L2c	LINE/L2	3180	3387	(0)	922687
283	25.2	4.8	9.2	chr12	99849999	99850151	(33425158)	+	LTR78B	LTR/ERV1	1114	1259	(37)	924436
44	0.0	0.0	0.0	chr12	99850282	99850319	(33424990)	+	(TC)n	Simple_repeat	1	38	(0)	924437
17	6.6	6.2	0.0	chr12	99850370	99850401	(33424908)	+	(TTAT)n	Simple_repeat	1	34	(0)	924438
33	3.1	0.0	0.0	chr12	100048736	100048768	(33226541)	+	(GA)n	Simple_repeat	1	33	(0)	924766
47	0.0	0.0	0.0	chr12	100048772	100048811	(33226498)	+	(GT)n	Simple_repeat	1	40	(0)	924767
1579	13.7	15.5	2.1	chr12	100108989	100109159	(33166150)	+	THE1D	LTR/ERVL-MaLR	1	188	(193)	924883
65	0.0	0.0	0.0	chr12	100109160	100109214	(33166095)	+	(CT)n	Simple_repeat	1	55	(0)	924884
1579	13.7	15.5	2.1	chr12	100109215	100109371	(33165938)	+	THE1D	LTR/ERVL-MaLR	189	380	(1)	924883
2026	10.4	3.1	2.8	chr12	100130634	100130921	(33144388)	+	AluSq2	SINE/Alu	1	289	(24)	924938
33	0.0	0.0	0.0	chr12	100130922	100130952	(33144357)	+	(ATAC)n	Simple_repeat	1	31	(0)	924939
76	4.0	0.0	0.0	chr12	100130962	100131039	(33144270)	+	(AG)n	Simple_repeat	1	78	(0)	924940
1530	16.4	0.0	0.0	chr12	100131100	100131324	(33143985)	+	AluJb	SINE/Alu	72	296	(16)	924941
15	15.0	5.4	0.0	chr12	100267546	100267582	(33007727)	+	(GGCC)n	Simple_repeat	1	39	(0)	925232
17	28.4	0.0	1.8	chr12	100573651	100573707	(32701602)	+	(GGC)n	Simple_repeat	1	57	(0)	925852
15	19.6	0.0	0.0	chr12	100621855	100621883	(32653426)	+	G-rich	Low_complexity	1	29	(0)	925912
32	16.9	0.0	0.0	chr12	100621884	100621919	(32653390)	+	GA-rich	Low_complexity	2	66	(0)	925913
483	23.2	13.6	2.0	chr12	100621920	100622079	(32653230)	+	MIR	SINE/MIR	6	183	(79)	925914
39	3.6	1.6	4.7	chr12	101158536	101158550	(32116759)	+	(TA)n	Simple_repeat	1	14	(0)	926748
57	0.0	0.0	0.0	chr12	101158551	101158599	(32116710)	+	(TC)n	Simple_repeat	1	49	(0)	926749
39	3.6	1.6	4.7	chr12	101158600	101158646	(32116663)	+	(TA)n	Simple_repeat	1	46	(0)	926750
471	18.5	0.0	0.0	chr12	101158662	101158742	(32116567)	+	MamRep137	DNA/TcMar-Tigger	285	365	(145)	926751
38	5.0	0.0	0.0	chr12	101652526	101652567	(31622742)	+	(CT)n	Simple_repeat	1	42	(0)	927714
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
73	24.9	0.0	0.6	chr12	103768495	103768666	(29506643)	+	GA-rich	Low_complexity	1	172	(0)	931263
38	0.0	0.0	0.0	chr12	104007234	104007266	(29268043)	+	(CT)n	Simple_repeat	1	33	(0)	931688
33	18.0	0.0	1.5	chr12	104209301	104209346	(29065963)	+	(TTTC)n	Simple_repeat	1	46	(0)	932078
56	3.6	0.0	0.0	chr12	104209347	104209403	(29065906)	+	(TC)n	Simple_repeat	1	57	(0)	932079
33	18.0	0.0	1.5	chr12	104209404	104209424	(29065885)	+	(TTTC)n	Simple_repeat	3	23	(0)	932080
2009	11.8	0.0	1.4	chr12	104209430	104209709	(29065600)	C	AluSp	SINE/Alu	(37)	276	1	932081
1350	22.5	4.0	5.0	chr12	104442907	104443528	(28831781)	+	MLT1D	LTR/ERVL-MaLR	11	627	(0)	932586
1776	15.5	15.3	1.9	chr12	104553386	104553568	(28721741)	C	MSTA	LTR/ERVL-MaLR	(2)	426	226	932821
39	2.7	0.0	0.0	chr12	104553569	104553606	(28721703)	+	(GA)n	Simple_repeat	1	38	(0)	932822
1776	15.5	15.3	1.9	chr12	104553607	104553790	(28721519)	C	MSTA	LTR/ERVL-MaLR	(203)	225	1	932821
1559	27.6	7.4	3.2	chr12	104586433	104587000	(28688309)	+	Tigger20a	DNA/TcMar-Tigger	350	943	(30)	932882
1162	18.5	4.5	0.8	chr12	104630039	104630272	(28645037)	C	MLT1E1A	LTR/ERVL-MaLR	(437)	243	1	932979
718	22.6	10.9	0.6	chr12	104630273	104630437	(28644872)	+	MIR	SINE/MIR	77	260	(2)	932978
31	11.0	2.0	0.0	chr12	104671729	104671777	(28603532)	+	(TC)n	Simple_repeat	1	50	(0)	933063
314	24.6	10.7	6.4	chr12	104887262	104887421	(28387888)	C	MIR3	SINE/MIR	(5)	203	37	933452
646	23.8	6.2	0.0	chr12	105506544	105506711	(27768598)	C	MLT1K	LTR/ERVL-MaLR	(416)	179	1	934516
62	29.8	4.7	2.7	chr12	105506715	105507046	(27768263)	+	GA-rich	Low_complexity	1	338	(0)	934517
834	19.9	0.5	4.1	chr12	105581008	105581209	(27694100)	+	MIRb	SINE/MIR	8	196	(66)	934640
188	35.0	0.0	5.9	chr12	105749611	105749695	(27525614)	C	MIRb	SINE/MIR	(6)	262	183	934946
33	18.8	0.0	0.0	chr12	105749696	105749762	(27525547)	+	(TCTC)n	Simple_repeat	1	67	(0)	934947
344	32.9	2.1	3.5	chr12	105749771	105749915	(27525394)	C	MIRb	SINE/MIR	(110)	158	16	934946
2135	13.5	0.7	0.0	chr12	105837932	105838219	(27437090)	+	AluSx	SINE/Alu	1	290	(22)	935109
48	0.0	0.0	0.0	chr12	105838235	105838275	(27437034)	+	(AG)n	Simple_repeat	1	41	(0)	935110
38	0.0	0.0	0.0	chr12	106075287	106075319	(27199990)	+	(AC)n	Simple_repeat	1	33	(0)	935560
12	16.9	0.0	0.0	chr12	106084356	106084382	(27190927)	+	(TCTG)n	Simple_repeat	1	27	(0)	935583
700	25.6	3.8	1.0	chr12	106154838	106155067	(27120242)	C	MIR	SINE/MIR	(0)	262	35	935725
945	24.9	6.3	5.7	chr12	106155257	106155571	(27119738)	+	MLT1J	LTR/ERVL-MaLR	31	347	(165)	935726
49	0.0	0.0	0.0	chr12	106314536	106314577	(26960732)	+	(TG)n	Simple_repeat	1	42	(0)	936022
33	5.1	0.0	0.0	chr12	106314578	106314618	(26960691)	+	(AG)n	Simple_repeat	1	41	(0)	936023
1836	16.1	0.3	2.3	chr12	106314719	106315023	(26960286)	+	AluJr	SINE/Alu	2	300	(12)	936024
13	23.2	0.0	0.0	chr12	106956029	106956064	(26319245)	+	(CCCGGC)n	Simple_repeat	1	36	(0)	937152
11	22.1	3.9	3.8	chr12	106956101	106956151	(26319158)	+	(CCCTGCC)n	Simple_repeat	1	53	(0)	937153
23	19.5	1.3	6.2	chr12	107318456	107318534	(25956775)	+	(GGAGCCG)n	Simple_repeat	1	80	(0)	937865
345	30.1	9.9	1.1	chr12	107481616	107481790	(25793519)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	404	938251
54	5.3	0.0	0.0	chr12	107481884	107481943	(25793366)	+	(TC)n	Simple_repeat	1	60	(0)	938252
14	18.8	5.0	4.8	chr12	107760887	107760946	(25514363)	+	(GCCGCG)n	Simple_repeat	1	63	(0)	938825
13	11.7	3.6	0.0	chr12	107761083	107761110	(25514199)	+	(CCCGG)n	Simple_repeat	1	29	(0)	938826
18	17.9	0.0	4.2	chr12	108731549	108731596	(24543713)	+	(CCGCCC)n	Simple_repeat	1	48	(0)	940859
1167	12.3	0.0	0.0	chr12	108736125	108736278	(24539031)	+	AluSz6	SINE/Alu	137	290	(22)	940872
28	5.9	0.0	0.0	chr12	108736279	108736314	(24538995)	+	(GA)n	Simple_repeat	1	36	(0)	940873
859	15.2	0.8	0.0	chr12	108736324	108736448	(24538861)	+	AluJb	SINE/Alu	1	126	(186)	940874
1503	17.2	9.4	0.0	chr12	108878396	108878645	(24396664)	+	AluJr4	SINE/Alu	7	282	(30)	941189
2288	11.2	0.3	1.0	chr12	108878658	108878968	(24396341)	C	AluSz	SINE/Alu	(3)	309	1	941190
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
24	14.1	0.0	0.0	chr12	109425903	109425941	(23849368)	+	(TC)n	Simple_repeat	1	39	(0)	942511
1775	16.4	0.3	4.7	chr12	109665654	109665952	(23609357)	+	AluJr	SINE/Alu	1	286	(26)	943008
41	2.6	0.0	0.0	chr12	109665955	109665994	(23609315)	+	(GA)n	Simple_repeat	1	40	(0)	943009
797	27.4	8.7	1.3	chr12	110092830	110093073	(23182236)	+	MIRb	SINE/MIR	4	264	(4)	943999
55	8.7	0.0	0.0	chr12	110093116	110093190	(23182119)	+	(AG)n	Simple_repeat	1	75	(0)	944000
749	18.8	12.3	11.1	chr12	110093253	110093428	(23181881)	+	MER20	DNA/hAT-Charlie	1	186	(33)	944001
51	5.3	6.3	0.0	chr12	110109461	110109539	(23165770)	+	(TC)n	Simple_repeat	1	84	(0)	944054
13	24.4	0.0	4.3	chr12	110281353	110281399	(22993910)	+	(CGCCC)n	Simple_repeat	1	47	(0)	944414
1942	11.4	0.4	3.2	chr12	110386948	110387228	(22888081)	+	AluJb	SINE/Alu	1	273	(39)	944605
162	5.6	0.0	0.0	chr12	110387229	110387432	(22887877)	+	(GA)n	Simple_repeat	1	204	(0)	944606
16	0.0	0.0	0.0	chr12	110387446	110387462	(22887847)	+	(A)n	Simple_repeat	1	17	(0)	944607
2325	9.3	0.3	1.3	chr12	110469496	110469808	(22805501)	C	AluSx1	SINE/Alu	(2)	310	1	944813
45	12.1	0.0	0.0	chr12	111058528	111058599	(22216710)	+	(AGAG)n	Simple_repeat	1	72	(0)	946223
126	25.5	1.3	2.8	chr12	111309597	111309985	(21965324)	+	(TC)n	Simple_repeat	1	383	(0)	946767
1935	10.9	4.7	0.4	chr12	111328621	111328887	(21946422)	C	AluSx1	SINE/Alu	(33)	279	1	946821
49	8.5	0.0	0.0	chr12	111328942	111329005	(21946304)	+	(TC)n	Simple_repeat	1	64	(0)	946822
466	27.4	0.0	0.0	chr12	111329130	111329231	(21946078)	C	MER81	DNA/hAT-Blackjack	(11)	103	2	946823
12	22.2	9.8	2.2	chr12	111368932	111369013	(21906296)	+	(CGGCGA)n	Simple_repeat	1	90	(0)	946920
14	13.1	0.0	0.0	chr12	111368992	111369017	(21906292)	+	(CGG)n	Simple_repeat	1	26	(0)	946921
13	17.8	5.3	0.0	chr12	111406139	111406176	(21869133)	+	(CGAG)n	Simple_repeat	1	40	(0)	947030
15	17.2	0.0	0.0	chr12	111842307	111842339	(21432970)	+	(GGCGGA)n	Simple_repeat	1	33	(0)	948010
18	23.0	1.5	4.5	chr12	111842515	111842580	(21432729)	+	(GCC)n	Simple_repeat	1	67	(0)	948011
2619	9.7	0.0	0.0	chr12	112017774	112018084	(21257225)	C	AluSq2	SINE/Alu	(2)	311	1	948307
1705	15.8	4.4	5.9	chr12	112018135	112018437	(21256872)	C	AluJr4	SINE/Alu	(14)	298	1	948308
2638	3.9	0.3	0.7	chr12	112109237	112109543	(21165766)	+	AluY	SINE/Alu	2	307	(4)	948494
4553	7.1	6.7	4.9	chr12	112109565	112109797	(21165512)	C	PABL_A	LTR/ERV1	(0)	660	429	948495
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
424	15.4	0.0	0.0	chr12	112471378	112471442	(20803867)	C	AluJo	SINE/Alu	(17)	295	231	949313
43	0.0	0.0	0.0	chr12	112471455	112471491	(20803818)	+	(AG)n	Simple_repeat	1	37	(0)	949314
15	20.4	0.0	0.0	chr12	112471505	112471533	(20803776)	+	A-rich	Low_complexity	1	29	(0)	949315
23	7.6	0.0	6.1	chr12	112572562	112572594	(20702715)	+	(TTCC)n	Simple_repeat	1	31	(0)	949574
43	6.9	3.2	0.0	chr12	112572595	112572656	(20702653)	+	(CT)n	Simple_repeat	1	64	(0)	949575
1702	19.4	0.7	0.0	chr12	112572661	112572938	(20702371)	C	AluJb	SINE/Alu	(32)	280	1	949576
433	27.0	6.3	2.4	chr12	112667484	112667650	(20607659)	C	LTR33	LTR/ERVL	(0)	515	342	949811
69	0.0	0.0	0.0	chr12	112667663	112667721	(20607588)	+	(AG)n	Simple_repeat	1	59	(0)	949812
290	29.0	10.7	1.0	chr12	112667786	112667886	(20607423)	C	LTR33	LTR/ERVL	(268)	247	136	949811
44	2.4	0.0	0.0	chr12	113048990	113049031	(20226278)	+	(AC)n	Simple_repeat	1	42	(0)	950673
2313	10.6	0.0	1.3	chr12	113432055	113432189	(19843120)	C	AluSx1	SINE/Alu	(176)	136	2	951590
326	28.8	3.9	3.9	chr12	113432190	113432304	(19843005)	C	L1MEg	LINE/L1	(4129)	1955	1840	951588
20	9.8	0.0	0.0	chr12	113432305	113432337	(19842972)	+	(TCTCTC)n	Simple_repeat	1	33	(0)	951592
2191	11.0	1.0	0.3	chr12	113432339	113432638	(19842671)	C	AluSc	SINE/Alu	(6)	303	2	951593
1675	16.4	6.8	19.3	chr12	113537530	113538021	(19737288)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	951831
811	16.7	0.8	0.8	chr12	113674323	113674454	(19600855)	C	FLAM_C	SINE/Alu	(11)	132	1	952194
99	25.2	4.2	1.4	chr12	113674479	113674808	(19600501)	+	(CT)n	Simple_repeat	1	344	(0)	952195
812	20.4	0.0	0.0	chr12	113718579	113718710	(19556599)	C	AluJb	SINE/Alu	(68)	244	113	952314
57	7.0	0.0	0.0	chr12	113718711	113718785	(19556524)	+	(GA)n	Simple_repeat	1	75	(0)	952315
40	22.0	1.1	1.1	chr12	113883028	113883119	(19392190)	+	GA-rich	Low_complexity	1	93	(0)	952682
1846	22.7	2.0	12.6	chr12	114216820	114216968	(19058341)	+	LTR33A	LTR/ERVL	25	179	(341)	953226
62	0.0	0.0	0.0	chr12	114216969	114217021	(19058288)	+	(TC)n	Simple_repeat	1	53	(0)	953227
1846	22.7	2.0	12.6	chr12	114217022	114217425	(19057884)	+	LTR33A	LTR/ERVL	180	518	(2)	953226
47	4.3	0.0	0.0	chr12	114450908	114450956	(18824353)	+	(GA)n	Simple_repeat	1	49	(0)	953729
142	12.5	2.8	1.1	chr12	114635441	114635695	(18639614)	+	(TCTT)n	Simple_repeat	1	262	(0)	954157
65	35.3	2.2	0.7	chr12	114635696	114635712	(18639597)	+	(TCTCTC)n	Simple_repeat	1	278	(0)	954158
2150	13.3	0.7	0.0	chr12	114640706	114641005	(18634304)	C	AluSx	SINE/Alu	(10)	302	1	954175
63	17.6	3.7	2.4	chr12	114641006	114641046	(18634263)	+	(TTCT)n	Simple_repeat	4	46	(0)	954176
15	8.1	0.0	3.6	chr12	114641045	114641072	(18634237)	+	(TCCC)n	Simple_repeat	1	28	(0)	954177
34	4.7	4.4	0.0	chr12	114641075	114641119	(18634190)	+	(TC)n	Simple_repeat	1	47	(0)	954178
14	24.0	4.1	0.0	chr12	114668105	114668153	(18607156)	+	G-rich	Low_complexity	1	51	(0)	954250
67	21.3	6.1	4.7	chr12	114698553	114698832	(18576477)	+	(TCTTC)n	Simple_repeat	1	297	(0)	954286
20	3.7	0.0	0.0	chr12	114722331	114722358	(18552951)	+	(TTCC)n	Simple_repeat	1	28	(0)	954340
41	8.0	0.0	0.0	chr12	114722359	114722411	(18552898)	+	(CT)n	Simple_repeat	1	53	(0)	954341
1899	14.0	0.4	0.4	chr12	114722417	114722687	(18552622)	C	AluSz6	SINE/Alu	(33)	279	9	954342
51	2.1	0.0	0.0	chr12	114882777	114882824	(18392485)	+	(TC)n	Simple_repeat	1	48	(0)	954803
976	18.4	0.0	0.0	chr12	114882826	114882977	(18392332)	C	AluJr	SINE/Alu	(28)	284	133	954804
54	18.9	5.3	0.0	chr12	115241122	115241253	(18034056)	+	GA-rich	Low_complexity	1	139	(0)	955597
256	26.3	0.0	0.0	chr12	115593959	115594015	(17681294)	+	MIRb	SINE/MIR	184	240	(28)	956348
47	0.0	0.0	0.0	chr12	115594101	115594140	(17681169)	+	(TC)n	Simple_repeat	1	40	(0)	956349
263	28.6	0.0	1.9	chr12	115594155	115594261	(17681048)	C	LTR16E1	LTR/ERVL	(4)	534	430	956350
1497	22.5	8.1	14.2	chr12	115705266	115705851	(17569458)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	956606
1786	18.1	0.0	0.7	chr12	115800762	115801048	(17474261)	+	AluJb	SINE/Alu	1	285	(27)	956809
62	1.8	0.0	0.0	chr12	115801050	115801106	(17474203)	+	(AG)n	Simple_repeat	1	57	(0)	956810
1863	12.5	0.6	12.0	chr12	115835863	115836213	(17439096)	+	AluSx	SINE/Alu	1	311	(1)	956886
1725	13.9	12.4	11.6	chr12	115836214	115836421	(17438888)	+	L1MA4	LINE/L1	6071	6297	(3)	956885
39	2.3	0.0	0.0	chr12	116120433	116120477	(17154832)	+	(TC)n	Simple_repeat	1	45	(0)	957387
51	0.0	0.0	0.0	chr12	116120478	116120521	(17154788)	+	(CA)n	Simple_repeat	1	44	(0)	957388
258	18.4	0.0	6.0	chr12	116124078	116124193	(17151116)	+	HERVIP10FH-int	LTR/ERV1	778	886	(4216)	957390
18	8.7	0.0	0.0	chr12	116136456	116136480	(17138829)	+	(GA)n	Simple_repeat	1	25	(0)	957409
739	30.2	7.8	1.0	chr12	116136481	116136791	(17138518)	+	Charlie29a	DNA/hAT-Charlie	249	582	(137)	957410
1980	15.3	0.7	0.3	chr12	116155142	116155428	(17119881)	+	AluJr	SINE/Alu	1	288	(24)	957439
51	0.0	0.0	0.0	chr12	116276309	116276352	(16998957)	+	(TG)n	Simple_repeat	1	44	(0)	957620
2033	14.2	1.4	0.0	chr12	116380521	116380809	(16894500)	+	AluSx1	SINE/Alu	3	295	(17)	957888
63	10.6	1.4	7.5	chr12	116380810	116380954	(16894355)	+	A-rich	Low_complexity	1	147	(0)	957889
899	18.3	4.4	0.6	chr12	116380969	116381144	(16894165)	+	MER58A	DNA/hAT-Charlie	42	224	(0)	957890
18	7.2	3.3	0.0	chr12	116534059	116534088	(16741221)	+	(CTC)n	Simple_repeat	1	31	(0)	958310
24	6.5	0.0	0.0	chr12	116658843	116658874	(16616435)	+	(CT)n	Simple_repeat	1	32	(0)	958631
15	32.4	1.1	3.3	chr12	116819327	116819415	(16455894)	+	(GGCCCGG)n	Simple_repeat	1	90	(0)	959020
12	14.2	6.8	4.3	chr12	116880842	116880885	(16394424)	+	GA-rich	Low_complexity	1	47	(0)	959183
16	26.9	0.0	8.5	chr12	116880900	116880954	(16394355)	+	(CTCCCG)n	Simple_repeat	1	89	(0)	959184
13	10.0	5.9	2.8	chr12	116880955	116880988	(16394321)	+	(CTCG)n	Simple_repeat	1	36	(0)	959185
16	5.6	7.3	4.5	chr12	116881117	116881157	(16394152)	+	(GCGCCG)n	Simple_repeat	1	44	(0)	959186
317	26.7	2.4	4.0	chr12	116933944	116934068	(16341241)	+	UCON71	Unknown	4	126	(0)	959315
82	11.2	2.3	0.0	chr12	117262406	117262534	(16012775)	+	(GA)n	Simple_repeat	1	132	(0)	959930
218	29.4	1.4	2.9	chr12	117335652	117335721	(15939588)	C	MIRb	SINE/MIR	(20)	248	180	960089
49	0.0	0.0	0.0	chr12	117335730	117335771	(15939538)	+	(GA)n	Simple_repeat	1	42	(0)	960090
272	13.2	0.0	0.0	chr12	117335772	117335809	(15939500)	C	FLAM_A	SINE/Alu	(31)	111	74	960091
1092	18.2	6.4	0.5	chr12	117335815	117336006	(15939303)	C	AluJo	SINE/Alu	(108)	204	1	960092
148	32.7	1.4	0.9	chr12	117363698	117364268	(15911041)	+	GA-rich	Low_complexity	1	579	(0)	960169
45	10.8	0.0	0.0	chr12	117455003	117455072	(15820237)	+	(AGAG)n	Simple_repeat	1	70	(0)	960405
40	16.3	1.9	4.7	chr12	117455073	117455103	(15820206)	+	(AGACAG)n	Simple_repeat	5	107	(0)	960406
45	25.1	0.8	1.6	chr12	117966595	117966715	(15308594)	+	(TC)n	Simple_repeat	1	122	(0)	961509
15	5.5	0.0	0.0	chr12	118034575	118034593	(15240716)	+	(CT)n	Simple_repeat	1	19	(0)	961676
225	7.1	0.0	0.0	chr12	118034639	118034666	(15240643)	C	AmnSINE1	SINE/5S-Deu-L2	(421)	154	127	961677
587	32.7	7.9	2.8	chr12	118098475	118098763	(15176546)	C	L2b	LINE/L2	(34)	3341	3037	961833
77	29.2	1.7	0.0	chr12	118757505	118757565	(14517744)	+	GA-rich	Low_complexity	182	242	(0)	963291
151	8.6	0.5	0.5	chr12	118757667	118757879	(14517430)	+	(CT)n	Simple_repeat	1	214	(0)	963292
1286	23.0	6.7	0.0	chr12	118854748	118855012	(14420297)	+	AluJb	SINE/Alu	1	284	(28)	963492
73	1.4	1.4	0.0	chr12	118855013	118855082	(14420227)	+	(AG)n	Simple_repeat	1	71	(0)	963493
245	26.8	12.3	0.0	chr12	118924471	118924541	(14350768)	+	MamTip2	DNA/hAT-Tip100	194	274	(31)	963620
42	4.6	0.0	0.0	chr12	118924556	118924600	(14350709)	+	(TC)n	Simple_repeat	1	45	(0)	963621
70	4.2	0.0	0.0	chr12	119160251	119160323	(14114986)	+	(CT)n	Simple_repeat	1	73	(0)	964118
1949	14.9	15.9	5.4	chr12	119308429	119308464	(13966845)	+	MLT2B4	LTR/ERVL	207	229	(327)	964471
56	0.0	0.0	0.0	chr12	119308465	119308512	(13966797)	+	(TC)n	Simple_repeat	1	48	(0)	964473
1949	14.9	15.9	5.4	chr12	119308513	119308714	(13966595)	+	MLT2B4	LTR/ERVL	230	495	(61)	964471
1839	13.1	0.3	3.1	chr12	119614138	119614411	(13660898)	+	AluSx	SINE/Alu	20	285	(27)	965158
29	0.0	0.0	0.0	chr12	119614412	119614436	(13660873)	+	(GA)n	Simple_repeat	1	25	(0)	965159
1839	13.1	0.3	3.1	chr12	119614437	119614452	(13660857)	+	AluSx	SINE/Alu	286	301	(11)	965158
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
2122	7.6	2.7	1.0	chr12	120292321	120292608	(12982701)	+	AluSg4	SINE/Alu	1	293	(17)	966632
257	25.8	9.1	6.2	chr12	120584909	120585036	(12690273)	C	MIRb	SINE/MIR	(111)	157	26	967439
18	16.8	2.5	0.0	chr12	120687327	120687366	(12587943)	+	(GCT)n	Simple_repeat	1	41	(0)	967692
15	18.9	6.2	0.0	chr12	120687385	120687432	(12587877)	+	(GGCGC)n	Simple_repeat	1	51	(0)	967693
13	30.7	0.0	0.0	chr12	120710495	120710542	(12564767)	+	G-rich	Low_complexity	1	48	(0)	967732
3112	24.5	9.5	3.7	chr12	120856583	120857251	(12418058)	+	L1M8	LINE/L1	3	712	(1643)	967979
5511	7.7	1.7	0.0	chr12	120857252	120857987	(12417322)	+	L1PA10	LINE/L1	5420	6168	(0)	967980
515	17.9	10.4	18.2	chr12	121128755	121128917	(12146392)	C	LTR16C	LTR/ERVL	(150)	339	198	968633
37	25.0	2.1	0.0	chr12	121128943	121129035	(12146274)	+	(TC)n	Simple_repeat	1	95	(0)	968635
516	27.9	11.5	6.7	chr12	121129037	121129482	(12145827)	+	MLT1O	LTR/ERVL-MaLR	53	522	(20)	968636
112	29.9	2.6	0.0	chr12	121357320	121357620	(11917689)	+	GA-rich	Low_complexity	1	308	(0)	969201
17	26.2	0.0	6.5	chr12	121712666	121712742	(11562567)	+	G-rich	Low_complexity	1	77	(0)	970150
210	31.4	1.4	1.4	chr12	121748864	121748934	(11526375)	C	MIRb	SINE/MIR	(178)	90	20	970250
377	23.5	12.6	2.4	chr12	121771849	121772018	(11503291)	+	L1ME4b	LINE/L1	685	874	(18)	970299
48	6.8	8.2	1.9	chr12	121772019	121772116	(11503193)	+	(TTCT)n	Simple_repeat	1	106	(0)	970300
2194	13.0	0.0	0.7	chr12	121772118	121772424	(11502885)	C	AluSx3	SINE/Alu	(1)	310	6	970301
12	20.7	0.0	2.9	chr12	122014586	122014620	(11260689)	+	(ATG)n	Simple_repeat	1	35	(0)	970899
42	23.7	3.1	1.5	chr12	122019026	122019142	(11256167)	+	(TTCC)n	Simple_repeat	1	119	(0)	970913
29	0.0	0.0	0.0	chr12	122019143	122019167	(11256142)	+	(TC)n	Simple_repeat	1	25	(0)	970914
42	23.7	3.1	1.5	chr12	122019168	122019178	(11256131)	+	(TTCC)n	Simple_repeat	4	14	(0)	970915
1656	15.3	0.0	0.4	chr12	122019180	122019428	(11255881)	C	AluJb	SINE/Alu	(64)	248	1	970916
377	24.8	8.6	5.2	chr12	122072811	122072860	(11202449)	+	HAL1	LINE/L1	852	902	(1605)	971042
29	0.0	0.0	0.0	chr12	122072861	122072885	(11202424)	+	(AG)n	Simple_repeat	1	25	(0)	971043
397	22.5	2.0	6.2	chr12	122072886	122073047	(11202262)	+	HAL1	LINE/L1	903	1128	(1337)	971042
1625	14.5	4.7	0.0	chr12	122368661	122368901	(10906408)	+	AluSz	SINE/Alu	1	253	(59)	971635
17	23.3	6.8	0.0	chr12	122752353	122752411	(10522898)	+	GA-rich	Low_complexity	1	63	(0)	972609
11	19.6	2.8	9.6	chr12	122774536	122774606	(10500703)	+	G-rich	Low_complexity	1	73	(0)	972649
31	28.3	1.0	1.0	chr12	123017902	123017984	(10257325)	+	(CCCT)n	Simple_repeat	1	83	(0)	973148
59	0.0	0.0	0.0	chr12	123017985	123018037	(10257272)	+	(TTCC)n	Simple_repeat	1	53	(0)	973149
31	28.3	1.0	1.0	chr12	123018038	123018054	(10257255)	+	(CCCT)n	Simple_repeat	4	20	(0)	973150
30	6.1	0.0	0.0	chr12	123018058	123018092	(10257217)	+	(TC)n	Simple_repeat	1	35	(0)	973151
771	24.1	0.0	0.0	chr12	123018097	123018241	(10257068)	C	AluJb	SINE/Alu	(39)	273	129	973152
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
2304	10.4	0.0	0.3	chr12	123574280	123574578	(9700731)	+	AluSc	SINE/Alu	1	298	(11)	974446
835	26.5	10.4	8.3	chr12	123574579	123574677	(9700632)	+	MLT1K	LTR/ERVL-MaLR	339	435	(160)	974445
328	17.6	11.7	9.9	chr12	123574690	123574720	(9700589)	+	MLT1K	LTR/ERVL-MaLR	416	440	(155)	974445
1951	12.9	0.7	0.7	chr12	123574721	123575026	(9700283)	C	AluSx	SINE/Alu	(0)	312	1	974447
15	32.2	0.0	1.6	chr12	123712361	123712423	(9562886)	+	(GCG)n	Simple_repeat	1	63	(0)	974781
246	32.1	9.5	4.0	chr12	123807365	123807729	(9467580)	C	L2a	LINE/L2	(182)	3244	2831	974980
55	0.0	0.0	0.0	chr12	123896149	123896195	(9379114)	+	(AG)n	Simple_repeat	1	47	(0)	975153
165	4.7	0.8	4.5	chr12	124262716	124262959	(9012350)	+	(TTTC)n	Simple_repeat	1	246	(0)	975786
1869	11.8	4.1	1.4	chr12	124262960	124263246	(9012063)	C	AluSz6	SINE/Alu	(17)	295	1	975787
539	28.1	5.3	0.6	chr12	124288694	124288923	(8986386)	+	L1MC4	LINE/L1	7689	7898	(144)	975843
47	0.0	0.0	0.0	chr12	124288958	124288997	(8986312)	+	(GA)n	Simple_repeat	1	40	(0)	975844
195	28.4	6.9	2.4	chr12	124289085	124289167	(8986142)	C	MIRc	SINE/MIR	(169)	99	13	975845
397	28.7	1.0	0.5	chr12	124438671	124439853	(8835456)	+	GA-rich	Low_complexity	1	1195	(0)	976059
19	20.3	4.1	4.0	chr12	124567489	124567561	(8707748)	+	(GCGCGGA)n	Simple_repeat	1	76	(0)	976292
1185	17.4	13.2	10.9	chr12	124776147	124776484	(8498825)	+	MLT1B	LTR/ERVL-MaLR	1	350	(40)	976810
12	14.1	10.0	4.5	chr12	124863641	124863700	(8411609)	+	(ACAGCGC)n	Simple_repeat	1	66	(0)	976996
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
23	10.5	3.6	3.5	chr12	125186267	125186314	(8088995)	+	(GCCCCG)n	Simple_repeat	1	48	(0)	977731
44	2.1	2.1	0.0	chr12	125186315	125186362	(8088947)	+	(CTC)n	Simple_repeat	1	49	(0)	977732
21	9.4	0.0	0.0	chr12	125186369	125186402	(8088907)	+	(CGCT)n	Simple_repeat	1	34	(0)	977733
36	24.0	2.7	1.8	chr12	125186406	125186516	(8088793)	+	(GGC)n	Simple_repeat	1	114	(0)	977734
62	9.3	5.7	0.0	chr12	125255228	125255332	(8019977)	+	(TC)n	Simple_repeat	1	111	(0)	977888
77	2.6	1.3	0.0	chr12	125706425	125706502	(7568807)	+	(AG)n	Simple_repeat	1	79	(0)	978595
494	10.8	3.4	0.2	chr12	127568278	127569090	(5706219)	+	(AG)n	Simple_repeat	1	841	(0)	981696
36	18.9	1.4	0.0	chr12	127722490	127722561	(5552748)	+	GA-rich	Low_complexity	1	73	(0)	981949
616	33.5	4.7	2.8	chr12	127722562	127722913	(5552396)	+	MamRep137	DNA/TcMar-Tigger	58	416	(94)	981950
667	30.3	9.4	3.0	chr12	128182028	128182135	(5093174)	C	LTR102_Mam	LTR/ERVL	(150)	701	597	982736
59	8.6	3.0	1.0	chr12	128182136	128182236	(5093073)	+	(TC)n	Simple_repeat	1	104	(0)	982741
394	24.1	10.1	1.8	chr12	128340668	128340901	(4934408)	C	L1MEd	LINE/L1	(2877)	3269	3081	983005
36	11.1	0.0	1.6	chr12	128340902	128340944	(4934365)	+	(CT)n	Simple_repeat	1	43	(0)	983006
1771	12.7	4.4	0.0	chr12	128340945	128341203	(4934106)	C	AluSx1	SINE/Alu	(4)	308	38	983007
140	15.9	2.6	0.0	chr12	128841238	128841502	(4433807)	+	(TC)n	Simple_repeat	1	272	(0)	983969
20	0.0	0.0	0.0	chr12	128841502	128841523	(4433786)	+	(CA)n	Simple_repeat	1	22	(0)	983970
14	5.0	0.0	0.0	chr12	130871534	130871554	(2403755)	+	(CATT)n	Simple_repeat	1	21	(0)	987385
62	18.2	1.4	2.8	chr12	130984741	130984882	(2290427)	+	(TTCC)n	Simple_repeat	1	144	(0)	987595
38	4.0	5.8	0.0	chr12	130984891	130984942	(2290367)	+	(TC)n	Simple_repeat	1	55	(0)	987596
1504	20.1	2.2	1.1	chr12	130984943	130985206	(2290103)	C	AluJr	SINE/Alu	(14)	298	31	987597
71	18.2	3.4	2.7	chr12	131285298	131285474	(1989835)	+	(TC)n	Simple_repeat	1	183	(0)	987947
307	28.1	10.9	8.7	chr12	131285508	131285908	(1989401)	C	MLT1K	LTR/ERVL-MaLR	(160)	435	25	987948
80	14.9	5.3	3.6	chr12	131680979	131681186	(1594123)	+	GA-rich	Low_complexity	1	219	(0)	988442
516	31.9	10.6	0.4	chr12	131825376	131825630	(1449679)	C	L1ME3G	LINE/L1	(411)	513	230	988649
48	19.6	1.6	3.9	chr12	131825638	131825763	(1449546)	+	(TTTC)n	Simple_repeat	1	128	(0)	988650
1300	15.9	0.5	1.4	chr12	131825798	131826005	(1449304)	C	AluJr	SINE/Alu	(101)	211	6	988651
49	15.2	4.2	0.0	chr12	132372778	132372873	(902436)	+	GA-rich	Low_complexity	1	100	(0)	989387
428	17.6	11.7	0.0	chr12	132372874	132372964	(902345)	C	MLT2B3	LTR/ERVL	(370)	347	245	989385
895	19.3	0.7	0.3	chr12	132376802	132378551	(896758)	+	GA-rich	Low_complexity	1	1762	(0)	989392
235	24.1	1.3	0.7	chr12	132422672	132423266	(852043)	+	(CTCT)n	Simple_repeat	1	603	(0)	989438
232	13.4	4.4	0.8	chr12	132607586	132608042	(667267)	+	(TCTCTG)n	Simple_repeat	1	477	(0)	989657
439	18.3	1.9	0.9	chr12	132762410	132762514	(512795)	+	AluJb	SINE/Alu	2	107	(205)	989910
2157	10.9	0.3	0.0	chr13	19805526	19805810	(94558518)	C	AluSx	SINE/Alu	(26)	286	1	993087
688	16.8	3.4	0.0	chr13	19805814	19805926	(94558402)	+	AluSz6	SINE/Alu	191	307	(5)	993088
37	22.7	1.3	8.3	chr13	19805928	19806081	(94558247)	+	A-rich	Low_complexity	1	156	(0)	993089
1534	16.7	8.5	1.9	chr13	20259032	20259294	(94105034)	C	AluJb	SINE/Alu	(30)	282	1	993979
1207	24.9	4.5	3.8	chr13	21663136	21663528	(92700800)	C	MSTB2	LTR/ERVL-MaLR	(0)	396	1	996486
3677	21.1	6.2	2.7	chr13	21663564	21665115	(92699213)	C	L1ME4b	LINE/L1	(5040)	2712	1004	996485
563	24.3	1.4	0.7	chr13	21813524	21813660	(92550668)	+	MER5A1	DNA/hAT-Charlie	3	140	(26)	996700
52	2.1	0.0	0.0	chr13	21813743	21813791	(92550537)	+	(TC)n	Simple_repeat	1	49	(0)	996701
21	16.3	0.0	0.0	chr13	21849438	21849473	(92514855)	+	(CT)n	Simple_repeat	1	36	(0)	996754
16	8.5	4.0	0.0	chr13	22435994	22436018	(91928310)	+	(AG)n	Simple_repeat	1	26	(0)	997464
49	4.1	0.0	0.0	chr13	22436031	22436081	(91928247)	+	(AG)n	Simple_repeat	1	51	(0)	997464
360	26.1	14.6	8.2	chr13	22436085	22436339	(91927989)	+	L1MEd	LINE/L1	2502	2775	(3371)	997462
1311	31.4	8.6	3.7	chr13	22946009	22946232	(91418096)	C	L1M5	LINE/L1	(846)	5300	5093	998123
1130	14.2	7.4	5.4	chr13	23459503	23459726	(90904602)	+	MLT2B3	LTR/ERVL	2	230	(285)	998881
55	20.1	0.9	0.0	chr13	23459727	23459834	(90904494)	+	(CT)n	Simple_repeat	1	109	(0)	998882
1367	22.5	1.2	5.7	chr13	23459835	23460142	(90904186)	+	MLT2B3	LTR/ERVL	217	509	(45)	998881
3019	18.1	2.5	7.7	chr13	23523426	23523558	(90840770)	+	L1MC3	LINE/L1	7663	7763	(22)	998977
50	2.2	0.0	0.0	chr13	23523591	23523637	(90840691)	+	(AG)n	Simple_repeat	1	47	(0)	998979
2329	17.6	2.4	4.4	chr13	24182281	24182715	(90181613)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	999929
67	6.3	1.2	0.0	chr13	24270993	24271075	(90093253)	+	(CT)n	Simple_repeat	1	84	(0)	1000057
2358	14.7	14.7	0.2	chr13	24625391	24625826	(89738502)	+	LTR54	LTR/ERV1	1	510	(0)	1000543
465	24.9	15.7	3.0	chr13	24625827	24625854	(89738474)	+	L2a	LINE/L2	3388	3412	(14)	1000542
24	20.1	0.0	0.0	chr13	24625856	24625909	(89738419)	+	GA-rich	Low_complexity	1	54	(0)	1000544
546	28.0	9.3	4.3	chr13	24625997	24626231	(89738097)	+	MIRc	SINE/MIR	2	249	(19)	1000545
970	25.7	5.0	0.7	chr13	25574233	25574538	(88789790)	+	MER46C	DNA/TcMar-Tigger	1	320	(18)	1002048
80	23.7	2.5	8.1	chr13	25731054	25731436	(88632892)	+	GA-rich	Low_complexity	12	372	(0)	1002224
46	4.3	0.0	0.0	chr13	25881579	25881626	(88482702)	+	(GA)n	Simple_repeat	1	48	(0)	1002427
728	17.2	2.2	0.7	chr13	25881745	25881879	(88482449)	+	MER5A1	DNA/hAT-Charlie	1	137	(29)	1002428
46	4.3	0.0	0.0	chr13	25892457	25892504	(88471824)	+	(TC)n	Simple_repeat	1	48	(0)	1002442
23	3.1	6.1	0.0	chr13	25892581	25892613	(88471715)	+	(CT)n	Simple_repeat	1	35	(0)	1002443
55	8.6	0.0	0.0	chr13	27005229	27005302	(87359026)	+	(TC)n	Simple_repeat	1	74	(0)	1004149
59	0.0	0.0	0.0	chr13	27751174	27751223	(86613105)	+	(GA)n	Simple_repeat	1	50	(0)	1005446
52	3.7	0.0	1.7	chr13	27930045	27930102	(86434226)	+	(TC)n	Simple_repeat	1	58	(0)	1005756
49	2.0	2.0	0.0	chr13	27981009	27981058	(86383270)	+	(TC)n	Simple_repeat	1	51	(0)	1005842
18	28.0	0.0	1.6	chr13	28138293	28138354	(86225974)	+	(CCTGCC)n	Simple_repeat	1	62	(0)	1006216
20	11.5	8.2	3.0	chr13	28138450	28138510	(86225818)	+	(CTCCTCC)n	Simple_repeat	1	66	(0)	1006217
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
36	13.9	0.0	0.0	chr13	29925015	29925077	(84439251)	+	(AGAGAG)n	Simple_repeat	1	63	(0)	1008839
43	7.7	0.0	0.0	chr13	29949601	29949655	(84414673)	+	(TC)n	Simple_repeat	1	55	(0)	1008871
282	14.6	14.3	0.0	chr13	30474936	30475029	(83889299)	C	AluYh9	SINE/Alu	(0)	311	226	1009765
608	12.6	2.2	0.0	chr13	30475032	30475118	(83889210)	C	AluYh7	SINE/Alu	(1)	310	222	1009766
525	13.6	9.0	0.0	chr13	30475131	30475211	(83889117)	C	AluYh9	SINE/Alu	(1)	310	222	1009767
325	31.4	14.6	0.0	chr13	30654175	30654279	(83710049)	+	MER5B	DNA/hAT-Charlie	4	126	(52)	1010141
20	11.0	2.4	2.4	chr13	30654318	30654334	(83709994)	+	(CCTT)n	Simple_repeat	1	17	(0)	1010142
31	2.8	2.6	2.5	chr13	30654335	30654373	(83709955)	+	(CT)n	Simple_repeat	1	40	(0)	1010143
20	11.0	2.4	2.4	chr13	30654374	30654396	(83709932)	+	(CCTT)n	Simple_repeat	2	25	(0)	1010144
615	16.7	0.0	0.0	chr13	30654407	30654524	(83709804)	C	FLAM_C	SINE/Alu	(7)	126	8	1010145
134	23.1	1.7	1.4	chr13	33127885	33128230	(81236098)	+	GA-rich	Low_complexity	1	352	(0)	1013854
46	3.6	0.0	0.0	chr13	34255630	34255646	(80108682)	+	(TC)n	Simple_repeat	1	17	(0)	1015540
45	2.4	0.0	0.0	chr13	34255647	34255689	(80108639)	+	(CA)n	Simple_repeat	1	43	(0)	1015541
46	3.6	0.0	0.0	chr13	34255690	34255729	(80108599)	+	(TC)n	Simple_repeat	2	41	(0)	1015542
358	36.5	10.7	5.2	chr13	35687694	35688175	(78676153)	+	L1MEd	LINE/L1	325	836	(6250)	1017485
210	34.1	15.2	8.7	chr13	36014906	36014978	(78349350)	+	L2c	LINE/L2	3146	3226	(149)	1017942
50	4.0	0.0	0.0	chr13	36014979	36015030	(78349298)	+	(TC)n	Simple_repeat	1	52	(0)	1017943
301	31.3	5.1	6.2	chr13	36015031	36015152	(78349176)	+	L2c	LINE/L2	3227	3368	(19)	1017942
16	26.9	2.9	2.8	chr13	36346430	36346499	(78017829)	+	(CGC)n	Simple_repeat	1	72	(0)	1018402
43	13.1	0.0	0.0	chr13	36363352	36363418	(78000910)	+	(TC)n	Simple_repeat	1	67	(0)	1018439
19	0.0	0.0	0.0	chr13	36849276	36849296	(77515032)	+	(TC)n	Simple_repeat	1	21	(0)	1019159
656	24.8	5.0	1.4	chr13	37046409	37046621	(77317707)	C	MER58A	DNA/hAT-Charlie	(1)	223	3	1019463
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
1939	19.6	2.9	8.0	chr13	37089526	37089882	(77274446)	+	MLT2D	LTR/ERVL	1	359	(55)	1019535
83	4.7	0.0	0.0	chr13	37089883	37089971	(77274357)	+	(TC)n	Simple_repeat	1	89	(0)	1019536
43	2.5	0.0	0.0	chr13	37419162	37419202	(76945126)	+	(AG)n	Simple_repeat	1	41	(0)	1019987
56	10.8	1.1	1.1	chr13	37753530	37753622	(76610706)	+	(AGAG)n	Simple_repeat	1	94	(0)	1020399
2268	18.2	6.9	14.2	chr13	38090817	38091480	(76272848)	C	LTR9	LTR/ERV1	(0)	612	1	1020815
845	27.5	4.3	6.5	chr13	38207465	38208029	(76156299)	C	MLT1E1	LTR/ERVL-MaLR	(0)	654	1	1020962
2515	18.9	2.8	5.0	chr13	38667810	38668057	(75696271)	+	L1MA7	LINE/L1	5535	5796	(495)	1021557
32	4.8	2.3	0.0	chr13	38668058	38668100	(75696228)	+	(AGAT)n	Simple_repeat	1	44	(0)	1021558
49	0.0	0.0	0.0	chr13	38668102	38668143	(75696185)	+	(GA)n	Simple_repeat	1	42	(0)	1021559
2515	18.9	2.8	5.0	chr13	38668144	38668467	(75695861)	+	L1MA7	LINE/L1	5797	6094	(197)	1021557
7996	11.4	1.8	3.6	chr13	38812912	38813464	(75550864)	C	L1M1	LINE/L1	(4271)	3294	2749	1021771
114	0.0	1.0	0.0	chr13	38813465	38813564	(75550764)	+	(TC)n	Simple_repeat	1	101	(0)	1021772
340	30.6	17.8	3.9	chr13	39244834	39245004	(75119324)	+	L2c	LINE/L2	3060	3276	(111)	1022365
47	2.0	1.9	1.9	chr13	39245005	39245057	(75119271)	+	(TC)n	Simple_repeat	1	54	(0)	1022366
340	30.6	17.8	3.9	chr13	39245058	39245140	(75119188)	+	L2c	LINE/L2	3277	3357	(30)	1022365
31	22.4	3.5	0.0	chr13	39603861	39603958	(74760370)	+	(TCTCTC)n	Simple_repeat	1	101	(0)	1022861
26	13.6	0.0	5.6	chr13	39888162	39888199	(74476129)	+	(CT)n	Simple_repeat	1	37	(0)	1023275
2214	11.4	2.3	1.0	chr13	39888200	39888505	(74475823)	C	AluSx3	SINE/Alu	(1)	310	1	1023276
1981	11.6	1.3	7.0	chr13	40066058	40066385	(74297943)	+	AluSq	SINE/Alu	1	309	(4)	1023509
57	14.6	2.9	0.0	chr13	40066386	40066487	(74297841)	+	GA-rich	Low_complexity	1	105	(0)	1023510
1662	11.6	3.7	0.4	chr13	40066489	40066747	(74297581)	C	MLT2A2	LTR/ERVL	(185)	268	1	1023507
2384	5.0	0.0	0.0	chr13	40663993	40664271	(73700057)	+	AluSc5	SINE/Alu	1	279	(30)	1024464
11	17.8	0.0	2.9	chr13	40664790	40664807	(73699521)	+	(CGCCCC)n	Simple_repeat	1	17	(0)	1024465
30	0.0	0.0	0.0	chr13	40664808	40664835	(73699493)	+	(CGCCAC)n	Simple_repeat	1	28	(0)	1024466
11	17.8	0.0	2.9	chr13	40664836	40664851	(73699477)	+	(CGCCCC)n	Simple_repeat	6	21	(0)	1024467
15	4.7	0.0	0.0	chr13	40666509	40666530	(73697798)	+	(CGGA)n	Simple_repeat	1	22	(0)	1024471
14	20.6	2.1	4.1	chr13	40666565	40666612	(73697716)	+	(GCT)n	Simple_repeat	1	49	(0)	1024472
240	25.8	13.6	0.0	chr13	41133076	41133164	(73231164)	+	MIR	SINE/MIR	109	211	(51)	1025318
16	0.0	0.0	0.0	chr13	41133363	41133380	(73230948)	+	(GT)n	Simple_repeat	1	18	(0)	1025319
578	19.3	6.3	0.0	chr13	41133395	41133513	(73230815)	C	L1MC2	LINE/L1	(37)	6307	6181	1025320
2914	14.0	1.2	0.9	chr13	41136616	41136829	(73227499)	+	MSTB	LTR/ERVL-MaLR	1	215	(211)	1025325
30	2.8	5.4	0.0	chr13	41136830	41136866	(73227462)	+	(TC)n	Simple_repeat	1	39	(0)	1025326
2914	14.0	1.2	0.9	chr13	41136867	41137076	(73227252)	+	MSTB	LTR/ERVL-MaLR	216	425	(1)	1025325
2245	11.4	0.7	0.0	chr13	41655091	41655388	(72708940)	C	AluSx	SINE/Alu	(12)	300	1	1026169
1845	19.0	6.8	2.3	chr13	41655389	41655460	(72708868)	+	L1MC4	LINE/L1	7841	7911	(131)	1026167
38	2.8	0.0	0.0	chr13	41655482	41655518	(72708810)	+	(AG)n	Simple_repeat	1	37	(0)	1026170
54	0.0	0.0	0.0	chr13	42026384	42026429	(72337899)	+	(GA)n	Simple_repeat	1	46	(0)	1026732
1898	15.8	0.0	0.0	chr13	42026430	42026707	(72337621)	C	AluJb	SINE/Alu	(34)	278	1	1026733
16	31.1	0.0	0.0	chr13	42048809	42048863	(72315465)	+	(CGC)n	Simple_repeat	1	55	(0)	1026762
15	10.0	0.0	0.0	chr13	42101751	42101772	(72262556)	+	(GT)n	Simple_repeat	1	22	(0)	1026846
32	3.2	0.0	0.0	chr13	42101773	42101804	(72262524)	+	(GA)n	Simple_repeat	1	32	(0)	1026847
2014	16.0	5.6	6.5	chr13	42105070	42105469	(72258859)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1026853
30	3.5	0.0	0.0	chr13	42228602	42228631	(72135697)	+	(GA)n	Simple_repeat	1	30	(0)	1027043
60	6.1	4.5	3.5	chr13	42228636	42228745	(72135583)	+	(AAAG)n	Simple_repeat	1	115	(0)	1027044
24	23.4	3.9	1.2	chr13	42272049	42272132	(72092196)	+	(GCG)n	Simple_repeat	1	86	(0)	1027115
19	0.0	12.9	0.0	chr13	42363267	42363302	(72001026)	+	(GT)n	Simple_repeat	1	40	(0)	1027251
42	9.3	0.0	0.0	chr13	42363302	42363359	(72000969)	+	(GA)n	Simple_repeat	1	58	(0)	1027252
342	35.2	11.3	6.8	chr13	42363366	42364017	(72000311)	C	L1M5	LINE/L1	(1060)	5086	4406	1027253
4813	10.7	4.4	9.5	chr13	43054751	43055573	(71308755)	+	LTR19C	LTR/ERV1	1	779	(0)	1028336
248	30.8	0.0	0.0	chr13	43110706	43110757	(71253571)	+	L2b	LINE/L2	3254	3305	(70)	1028427
233	36.5	8.7	8.7	chr13	43110851	43111069	(71253259)	+	Tigger19b	DNA/TcMar-Tigger	5	223	(327)	1028428
345	32.7	0.9	0.0	chr13	43755182	43755285	(70609043)	+	MamRTE1	LINE/RTE-BovB	3706	3810	(2)	1029283
16	9.9	2.6	7.7	chr13	43755462	43755499	(70608829)	+	(CT)n	Simple_repeat	1	39	(0)	1029284
321	31.0	6.6	1.3	chr13	43755536	43755692	(70608636)	C	HAL1b	LINE/L1	(6)	2415	2250	1029285
43	3.7	1.8	0.0	chr13	44425065	44425119	(69939209)	+	(GA)n	Simple_repeat	1	56	(0)	1030285
326	20.6	0.0	0.0	chr13	44917926	44917998	(69446330)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1031204
115	4.3	2.0	1.9	chr13	45212425	45212575	(69151753)	+	(TTTC)n	Simple_repeat	1	154	(0)	1031803
1079	13.3	0.6	2.4	chr13	45212576	45212740	(69151588)	C	AluSx1	SINE/Alu	(25)	287	126	1031804
473	29.7	4.1	0.0	chr13	45219164	45219296	(69145032)	C	MIRb	SINE/MIR	(52)	178	37	1031820
107	11.6	2.3	0.0	chr13	45663483	45663656	(68700672)	+	(CTTT)n	Simple_repeat	1	178	(0)	1032638
2250	13.5	1.0	0.0	chr13	45663658	45663954	(68700374)	C	AluSz6	SINE/Alu	(12)	300	1	1032639
25	9.1	0.0	0.0	chr13	45673822	45673856	(68690472)	+	(TC)n	Simple_repeat	1	35	(0)	1032647
16	25.7	0.0	0.0	chr13	45673857	45673866	(68690462)	+	(GTCT)n	Simple_repeat	2	46	(0)	1032648
346	31.9	6.6	2.9	chr13	45781989	45782162	(68582166)	+	Plat_L3	LINE/CR1	3127	3307	(279)	1032822
41	6.0	0.0	0.0	chr13	45933391	45933442	(68430886)	+	(GA)n	Simple_repeat	1	52	(0)	1033108
28	14.8	3.8	0.0	chr13	46179968	46180020	(68184308)	+	(TC)n	Simple_repeat	1	55	(0)	1033472
263	25.7	9.2	2.5	chr13	46180138	46180320	(68184008)	+	MIRb	SINE/MIR	34	268	(0)	1033473
4422	26.5	9.5	4.4	chr13	46199860	46200750	(68163578)	C	L2a	LINE/L2	(1155)	2264	1351	1033504
22	17.0	6.4	3.6	chr13	46211849	46211926	(68152402)	+	(GCCTC)n	Simple_repeat	1	83	(0)	1033525
49	0.0	0.0	0.0	chr13	46392869	46392910	(67971418)	+	(GA)n	Simple_repeat	1	42	(0)	1033824
62	0.0	0.0	0.0	chr13	46530935	46530987	(67833341)	+	(GA)n	Simple_repeat	1	53	(0)	1034061
196	11.3	1.8	1.8	chr13	46537113	46537446	(67826882)	+	(CTTT)n	Simple_repeat	1	340	(0)	1034072
1865	13.7	3.4	0.3	chr13	46537469	46537752	(67826576)	C	AluSz6	SINE/Alu	(9)	303	11	1034073
296	30.2	8.7	13.7	chr13	47693217	47693691	(66670637)	+	L2	LINE/L2	1423	1871	(1548)	1035638
1841	19.7	6.5	10.1	chr13	48220006	48220195	(66144133)	+	MLT1D	LTR/ERVL-MaLR	1	198	(307)	1036492
34	3.0	0.0	0.0	chr13	48220196	48220229	(66144099)	+	(TC)n	Simple_repeat	1	34	(0)	1036493
1841	19.7	6.5	10.1	chr13	48220230	48220563	(66143765)	+	MLT1D	LTR/ERVL-MaLR	199	505	(0)	1036492
1072	18.5	0.0	0.0	chr13	48229297	48229453	(66134875)	C	FAM	SINE/Alu	(28)	157	1	1036509
751	15.4	0.7	0.0	chr13	48229458	48229600	(66134728)	C	L1MC1	LINE/L1	(817)	5329	5186	1036505
23	17.4	4.7	1.5	chr13	48229626	48229672	(66134656)	+	(TC)n	Simple_repeat	1	48	(0)	1036510
2163	9.5	0.0	4.4	chr13	48229673	48229868	(66134460)	C	AluSp	SINE/Alu	(0)	313	134	1036511
1509	19.0	4.1	1.2	chr13	48279430	48279687	(66084641)	+	AluJr4	SINE/Alu	9	274	(38)	1036583
54	0.0	0.0	0.0	chr13	48279688	48279733	(66084595)	+	(CT)n	Simple_repeat	1	46	(0)	1036584
27	16.1	0.0	3.4	chr13	48303940	48303998	(66060330)	+	(GCC)n	Simple_repeat	1	59	(0)	1036634
2610	28.1	13.0	5.3	chr13	48493261	48493315	(65871013)	+	L2a	LINE/L2	2748	2758	(661)	1036897
48	3.6	3.5	0.0	chr13	48493316	48493372	(65870956)	+	(CT)n	Simple_repeat	1	59	(0)	1036899
2610	25.3	11.6	3.4	chr13	48493373	48493962	(65870366)	+	L2a	LINE/L2	2759	3426	(0)	1036897
19	18.9	0.0	0.0	chr13	48602982	48603017	(65761311)	+	GA-rich	Low_complexity	1	36	(0)	1037089
1742	22.4	10.0	2.9	chr13	48603018	48603473	(65760855)	C	MLT2B2	LTR/ERVL	(20)	495	4	1037090
1017	17.7	0.0	0.6	chr13	48695097	48695254	(65669074)	C	AluJr	SINE/Alu	(34)	278	122	1037215
77	14.6	2.4	3.5	chr13	48695255	48695422	(65668906)	+	(CTTT)n	Simple_repeat	1	172	(0)	1037216
283	13.2	0.0	0.0	chr13	48695441	48695478	(65668850)	C	FLAM_A	SINE/Alu	(34)	108	71	1037217
3872	16.4	5.4	2.1	chr13	48695479	48696524	(65667804)	C	L1MD1	LINE/L1	(135)	6498	5406	1037213
742	19.8	7.0	0.7	chr13	48785778	48785943	(65578385)	+	MLT1B	LTR/ERVL-MaLR	1	174	(200)	1037328
59	0.0	0.0	0.0	chr13	48785944	48785993	(65578335)	+	(TC)n	Simple_repeat	1	50	(0)	1037329
718	24.6	5.4	1.7	chr13	48785994	48786004	(65578324)	+	MLT1B	LTR/ERVL-MaLR	175	185	(189)	1037328
34	0.0	0.0	0.0	chr13	49275690	49275726	(65088602)	+	(TA)n	Simple_repeat	1	37	(0)	1038100
82	0.0	0.0	0.0	chr13	49275727	49275796	(65088532)	+	(AG)n	Simple_repeat	1	70	(0)	1038101
2102	11.9	0.0	0.0	chr13	49275797	49276065	(65088263)	C	AluSc	SINE/Alu	(39)	270	2	1038102
354	29.1	18.3	2.2	chr13	49445098	49445280	(64919048)	+	MIR	SINE/MIR	21	239	(23)	1038413
1833	18.5	1.8	8.7	chr13	49655673	49656098	(64708230)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1038786
75	15.5	4.7	4.1	chr13	49996819	49997027	(64367301)	+	G-rich	Low_complexity	1	210	(0)	1039473
14	5.0	0.0	0.0	chr13	50125825	50125845	(64238483)	+	(GGC)n	Simple_repeat	1	21	(0)	1039668
12	23.1	3.7	3.6	chr13	50125846	50125875	(64238453)	+	(CGCGGC)n	Simple_repeat	4	56	(0)	1039669
30	11.0	0.0	0.0	chr13	50263170	50263201	(64101127)	+	(TC)n	Simple_repeat	1	32	(0)	1039863
48	0.0	0.0	0.0	chr13	50263202	50263245	(64101083)	+	(TCTT)n	Simple_repeat	1	44	(0)	1039864
2292	9.8	1.4	0.4	chr13	50263248	50263524	(64100804)	C	AluSq2	SINE/Alu	(32)	281	2	1039865
33	16.2	3.1	0.0	chr13	50522161	50522224	(63842104)	+	GA-rich	Low_complexity	1	66	(0)	1040250
221	20.8	3.6	1.9	chr13	50680378	50680431	(63683897)	C	MER5B	DNA/hAT-Charlie	(1)	177	123	1040486
34	2.6	0.0	0.0	chr13	50680463	50680502	(63683826)	+	(CT)n	Simple_repeat	1	40	(0)	1040487
49	0.0	0.0	0.0	chr13	50680503	50680544	(63683784)	+	(CA)n	Simple_repeat	1	42	(0)	1040488
1574	21.2	10.4	15.1	chr13	51499131	51499707	(62864621)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	2	1041681
718	24.0	9.3	1.0	chr13	51636520	51636725	(62727603)	C	LTR108d_Mam	LTR/ERVL	(2)	542	318	1041907
1527	17.0	1.2	1.6	chr13	51720617	51720937	(62643391)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	12	1042016
34	0.0	0.0	0.0	chr13	51720943	51720971	(62643357)	+	(TC)n	Simple_repeat	1	29	(0)	1042017
582	21.1	2.7	3.4	chr13	51720974	51721120	(62643208)	+	L1MA9	LINE/L1	6145	6290	(22)	1042018
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
35	10.5	0.0	0.0	chr13	53207782	53207832	(61156496)	+	(GA)n	Simple_repeat	1	51	(0)	1044317
46	2.3	0.0	0.0	chr13	53309914	53309957	(61054371)	+	(AG)n	Simple_repeat	1	44	(0)	1044469
39	6.7	0.0	0.0	chr13	54805130	54805176	(59559152)	+	(TC)n	Simple_repeat	1	47	(0)	1046360
1168	24.9	6.7	0.9	chr13	56791761	56791915	(57572413)	C	MLT1A	LTR/ERVL-MaLR	(29)	345	175	1048787
44	0.0	0.0	0.0	chr13	56791916	56791953	(57572375)	+	(AG)n	Simple_repeat	1	38	(0)	1048788
1168	24.9	6.7	0.9	chr13	56791954	56792122	(57572206)	C	MLT1A	LTR/ERVL-MaLR	(200)	174	2	1048787
5484	19.2	2.4	3.3	chr13	56792127	56793444	(57570884)	C	L1MB1	LINE/L1	(702)	5466	4155	1048786
24	0.0	0.0	0.0	chr13	60162784	60162809	(54201519)	+	(CT)n	Simple_repeat	1	26	(0)	1053082
42	0.0	0.0	0.0	chr13	60162810	60162845	(54201483)	+	(CA)n	Simple_repeat	1	36	(0)	1053083
40	17.4	0.0	0.0	chr13	64020988	64021058	(50343270)	+	GA-rich	Low_complexity	1	71	(0)	1058019
37	5.1	0.0	0.0	chr13	66526508	66526548	(47837780)	+	(TC)n	Simple_repeat	1	41	(0)	1061150
261	18.4	5.6	4.5	chr13	66764998	66765173	(47599155)	C	HERV17-int	LTR/ERV1	(7774)	852	675	1061427
42	6.9	1.6	0.0	chr13	66849416	66849476	(47514852)	+	(ATATATGACA)n	Simple_repeat	1	62	(0)	1061535
37	0.0	0.0	0.0	chr13	66849487	66849518	(47514810)	+	(TA)n	Simple_repeat	1	32	(0)	1061536
25	0.0	0.0	0.0	chr13	66849519	66849546	(47514782)	+	(GA)n	Simple_repeat	1	28	(0)	1061537
1096	24.3	7.9	2.2	chr13	66957540	66957674	(47406654)	+	MLT1A	LTR/ERVL-MaLR	45	187	(187)	1061680
30	9.7	0.0	0.0	chr13	66957675	66957718	(47406610)	+	(CT)n	Simple_repeat	1	44	(0)	1061681
1096	24.3	7.9	2.2	chr13	66957719	66957893	(47406435)	+	MLT1A	LTR/ERVL-MaLR	188	373	(1)	1061680
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
258	20.4	6.1	12.3	chr13	70024414	70024519	(44339809)	C	Charlie2b	DNA/hAT-Charlie	(2113)	669	571	1065569
590	26.3	5.6	12.4	chr13	70024514	70024620	(44339708)	C	Charlie2b	DNA/hAT-Charlie	(2454)	328	228	1065569
47	2.3	0.0	0.0	chr13	70024621	70024665	(44339663)	+	(TC)n	Simple_repeat	1	45	(0)	1065570
590	26.3	5.6	12.4	chr13	70024666	70024904	(44339424)	C	Charlie2b	DNA/hAT-Charlie	(2555)	227	7	1065569
51	2.1	0.0	0.0	chr13	70795486	70795533	(43568795)	+	(TC)n	Simple_repeat	1	48	(0)	1066621
58	1.9	0.0	0.0	chr13	71041639	71041692	(43322636)	+	(GA)n	Simple_repeat	1	54	(0)	1066949
35	12.2	3.1	1.5	chr13	71278315	71278378	(43085950)	+	GA-rich	Low_complexity	1	66	(0)	1067252
65	4.1	1.3	1.3	chr13	71552767	71552843	(42811485)	+	(AT)n	Simple_repeat	1	78	(0)	1067594
39	4.3	0.0	0.0	chr13	71552844	71552891	(42811437)	+	(GA)n	Simple_repeat	1	48	(0)	1067595
1317	9.5	0.6	0.6	chr13	71552899	71553066	(42811262)	+	AluSx1	SINE/Alu	1	168	(144)	1067596
42	6.9	3.3	0.0	chr13	71752453	71752513	(42611815)	+	(TC)n	Simple_repeat	1	63	(0)	1067865
1196	8.4	13.2	0.0	chr13	71858594	71858783	(42505545)	C	L1MA8	LINE/L1	(199)	6092	5874	1068004
45	7.2	2.6	2.5	chr13	71858869	71858945	(42505383)	+	(CT)n	Simple_repeat	1	79	(0)	1068005
21	30.4	2.6	0.0	chr13	71864950	71865025	(42499303)	+	GA-rich	Low_complexity	1	78	(0)	1068013
13	26.4	0.0	3.8	chr13	71867035	71867087	(42497241)	+	G-rich	Low_complexity	1	53	(0)	1068021
1179	18.2	9.5	1.0	chr13	71905727	71906015	(42458313)	C	L1MC2	LINE/L1	(6)	6338	6023	1068079
46	0.0	0.0	0.0	chr13	71906047	71906085	(42458243)	+	(TC)n	Simple_repeat	1	39	(0)	1068080
274	34.9	14.7	6.1	chr13	71906150	71906830	(42457498)	C	L2b	LINE/L2	(2)	3373	2629	1068081
210	33.0	5.8	3.0	chr13	73018849	73018948	(41345380)	+	L3	LINE/CR1	3990	4092	(7)	1069761
37	5.1	0.0	0.0	chr13	73018971	73019011	(41345317)	+	(TC)n	Simple_repeat	1	41	(0)	1069762
2408	9.5	1.0	0.7	chr13	73019029	73019322	(41345006)	C	AluSz	SINE/Alu	(17)	295	1	1069763
18	8.7	0.0	0.0	chr13	74133796	74133820	(40230508)	+	(CT)n	Simple_repeat	1	25	(0)	1071554
25	26.0	0.0	2.9	chr13	74133820	74133889	(40230439)	+	(CA)n	Simple_repeat	1	70	(0)	1071555
54	0.0	0.0	0.0	chr13	74287350	74287395	(40076933)	+	(GA)n	Simple_repeat	1	46	(0)	1071768
1033	25.1	8.3	5.3	chr13	75020305	75020644	(39343684)	+	MLT1G3	LTR/ERVL-MaLR	239	589	(6)	1072733
1283	23.7	8.0	2.5	chr13	75228889	75229042	(39135286)	+	MLT1B	LTR/ERVL-MaLR	1	175	(215)	1073009
49	6.3	1.5	1.4	chr13	75229043	75229110	(39135218)	+	(TC)n	Simple_repeat	1	69	(0)	1073010
1283	23.7	8.0	2.5	chr13	75229111	75229323	(39135005)	+	MLT1B	LTR/ERVL-MaLR	176	389	(1)	1073009
31	0.0	2.5	2.4	chr13	75348915	75348954	(39015374)	+	(GA)n	Simple_repeat	1	41	(0)	1073189
49	0.0	0.0	0.0	chr13	75348955	75348996	(39015332)	+	(GT)n	Simple_repeat	1	42	(0)	1073190
230	19.4	3.1	11.4	chr13	75437801	75437870	(38926458)	C	MER135	DNA	(15)	213	150	1073325
278	35.0	7.8	7.8	chr13	75442808	75442965	(38921363)	C	Tigger19b	DNA/TcMar-Tigger	(163)	387	233	1073334
47	4.3	0.0	0.0	chr13	75871247	75871295	(38493033)	+	(TC)n	Simple_repeat	1	49	(0)	1073968
15	17.9	0.0	0.0	chr13	75871297	75871328	(38493000)	+	(TATC)n	Simple_repeat	1	32	(0)	1073969
756	30.0	10.4	4.1	chr13	75871384	75871599	(38492729)	C	L2a	LINE/L2	(1)	3425	3187	1073970
3003	23.1	5.6	0.5	chr13	76031115	76031899	(38332429)	C	L1ME1	LINE/L1	(0)	6179	5353	1074224
43	18.4	0.0	0.0	chr13	76031901	76031980	(38332348)	+	(TC)n	Simple_repeat	1	80	(0)	1074225
774	23.6	11.8	2.0	chr13	76031981	76032312	(38332016)	C	L1ME1	LINE/L1	(2417)	5368	5004	1074224
452	36.8	6.5	3.2	chr13	76372086	76372456	(37991872)	+	L1MC4	LINE/L1	3657	4040	(2174)	1074624
47	6.7	1.5	1.5	chr13	76372484	76372549	(37991779)	+	(TC)n	Simple_repeat	1	67	(0)	1074633
30	7.4	2.3	0.0	chr13	77233861	77233903	(37130425)	+	(AG)n	Simple_repeat	1	44	(0)	1075876
16	14.5	0.0	0.0	chr13	77233999	77234029	(37130299)	+	(TACA)n	Simple_repeat	1	31	(0)	1075877
364	22.1	1.0	5.9	chr13	77696876	77696976	(36667352)	+	L2a	LINE/L2	3331	3426	(0)	1076565
6021	14.9	11.4	0.2	chr13	79393528	79394632	(34969696)	+	MER50-int	LTR/ERV1	1	1231	(5974)	1078857
773	32.5	4.9	1.1	chr13	87029451	87029523	(27334805)	+	L1MDa	LINE/L1	492	573	(5974)	1088467
57	6.3	0.0	0.0	chr13	87029524	87029590	(27334738)	+	(CT)n	Simple_repeat	1	67	(0)	1088468
773	32.5	4.9	1.1	chr13	87029591	87029793	(27334535)	+	L1MDa	LINE/L1	574	779	(5768)	1088467
27	16.6	0.0	0.0	chr13	87051874	87051920	(27312408)	+	(CT)n	Simple_repeat	1	47	(0)	1088495
16	5.2	0.0	0.0	chr13	87051920	87051939	(27312389)	+	(CA)n	Simple_repeat	1	20	(0)	1088496
47	29.2	0.8	0.0	chr13	87149646	87149776	(27214552)	+	(AT)n	Simple_repeat	1	132	(0)	1088636
54	0.0	0.0	0.0	chr13	87149883	87149928	(27214400)	+	(GA)n	Simple_repeat	1	46	(0)	1088637
38	0.0	0.0	0.0	chr13	87837250	87837282	(26527046)	+	(TC)n	Simple_repeat	1	33	(0)	1089539
1543	22.8	8.0	2.3	chr13	90990020	90990148	(23374180)	+	LTR40b	LTR/ERVL	1	150	(312)	1093617
63	0.0	0.0	0.0	chr13	90990149	90990202	(23374126)	+	(TC)n	Simple_repeat	1	54	(0)	1093618
1543	22.8	8.0	2.3	chr13	90990203	90990507	(23373821)	+	LTR40b	LTR/ERVL	151	462	(0)	1093617
188	33.8	20.7	1.4	chr13	91824838	91825047	(22539281)	C	MIR	SINE/MIR	(1)	261	1	1094797
40	20.7	2.2	0.0	chr13	91825106	91825194	(22539134)	+	GA-rich	Low_complexity	1	91	(0)	1094798
261	32.5	4.1	0.0	chr13	91825241	91825357	(22538971)	+	MIRb	SINE/MIR	84	205	(63)	1094799
19	8.1	0.0	0.0	chr13	93234663	93234688	(21129640)	+	(TG)n	Simple_repeat	1	26	(0)	1096619
36	10.8	3.3	0.0	chr13	93234688	93234747	(21129581)	+	(GA)n	Simple_repeat	1	62	(0)	1096620
44	0.0	0.0	0.0	chr13	93276459	93276496	(21087832)	+	(AG)n	Simple_repeat	1	38	(0)	1096674
34	2.6	0.0	0.0	chr13	93276497	93276536	(21087792)	+	(TG)n	Simple_repeat	1	40	(0)	1096675
17	16.4	3.6	1.2	chr13	93502191	93502239	(20862089)	+	A-rich	Low_complexity	1	50	(0)	1096968
36	19.9	0.0	0.0	chr13	93502247	93502316	(20862012)	+	GA-rich	Low_complexity	1	70	(0)	1096969
3118	18.7	5.8	0.6	chr13	93502317	93502955	(20861373)	C	MER63C	DNA/hAT-Blackjack	(83)	847	174	1096970
827	20.1	2.7	1.6	chr13	93505232	93505413	(20858915)	C	Tigger17a	DNA/TcMar-Tigger	(9)	645	462	1096975
24	6.5	0.0	0.0	chr13	93505422	93505482	(20858846)	+	(AG)n	Simple_repeat	1	61	(0)	1096976
2018	20.9	3.6	4.3	chr13	93505483	93505927	(20858401)	C	Tigger17c	DNA/TcMar-Tigger	(746)	442	1	1096977
16	22.8	1.9	1.8	chr13	93833045	93833061	(20531267)	+	(AGAT)n	Simple_repeat	1	17	(0)	1097418
31	0.0	0.0	0.0	chr13	93833062	93833090	(20531238)	+	(GATG)n	Simple_repeat	1	29	(0)	1097419
16	22.8	1.9	1.8	chr13	93833091	93833107	(20531221)	+	(AGAT)n	Simple_repeat	2	19	(0)	1097420
60	0.0	0.0	0.0	chr13	93833108	93833158	(20531170)	+	(AG)n	Simple_repeat	1	51	(0)	1097421
16	22.8	1.9	1.8	chr13	93833159	93833176	(20531152)	+	(AGAT)n	Simple_repeat	4	21	(0)	1097422
288	26.3	17.5	0.0	chr13	93972771	93972869	(20391459)	C	Tigger12A	DNA/TcMar-Tigger	(620)	199	80	1097630
80	8.1	0.0	0.0	chr13	93972894	93972997	(20391331)	+	(TC)n	Simple_repeat	1	104	(0)	1097631
44	0.0	0.0	0.0	chr13	94175956	94175993	(20188335)	+	(AG)n	Simple_repeat	1	38	(0)	1097914
372	19.0	9.9	0.0	chr13	94176026	94176125	(20188203)	C	L1M4	LINE/L1	(821)	5325	5215	1097915
28	12.7	0.0	0.0	chr13	94180865	94180907	(20183421)	+	(AG)n	Simple_repeat	1	43	(0)	1097920
472	25.6	17.0	0.0	chr13	94180938	94181093	(20183235)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	1097921
1477	20.8	7.4	1.2	chr13	94387571	94387730	(19976598)	+	MLT1A0	LTR/ERVL-MaLR	1	176	(189)	1098219
41	0.0	0.0	0.0	chr13	94387731	94387765	(19976563)	+	(TC)n	Simple_repeat	1	35	(0)	1098220
1477	20.8	7.4	1.2	chr13	94387766	94387945	(19976383)	+	MLT1A0	LTR/ERVL-MaLR	177	363	(2)	1098219
1734	14.6	5.0	2.2	chr13	94455106	94455379	(19908949)	+	AluJr	SINE/Alu	1	282	(30)	1098319
36	0.0	0.0	0.0	chr13	94455382	94455412	(19908916)	+	(AG)n	Simple_repeat	1	31	(0)	1098320
1041	23.5	1.4	0.0	chr13	94455472	94455688	(19908640)	+	MER58A	DNA/hAT-Charlie	5	224	(0)	1098321
436	29.3	2.2	2.2	chr13	94501496	94501631	(19862697)	C	L2b	LINE/L2	(0)	3375	3240	1098418
34	8.1	3.9	0.0	chr13	94501632	94501683	(19862645)	+	(GA)n	Simple_repeat	1	54	(0)	1098419
211	20.0	2.2	0.0	chr13	94501728	94501772	(19862556)	C	L2b	LINE/L2	(295)	3080	3035	1098418
661	1.4	0.0	0.0	chr13	94549650	94549722	(19814606)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1098498
24	0.0	0.0	0.0	chr13	94674365	94674391	(19689937)	+	(GT)n	Simple_repeat	1	27	(0)	1098706
39	4.0	1.9	1.8	chr13	94674391	94674444	(19689884)	+	(GA)n	Simple_repeat	1	55	(0)	1098707
342	22.7	2.2	1.1	chr13	94674533	94674621	(19689707)	C	Charlie29a	DNA/hAT-Charlie	(221)	498	409	1098708
2366	10.6	0.0	1.3	chr13	94976929	94977240	(19387088)	+	AluSg	SINE/Alu	1	308	(2)	1099194
19	10.7	0.0	0.0	chr13	94977241	94977262	(19387066)	+	(AG)n	Simple_repeat	1	22	(0)	1099195
37	0.0	0.0	0.0	chr13	94977307	94977338	(19386990)	+	(GA)n	Simple_repeat	1	32	(0)	1099196
330	29.7	7.9	0.0	chr13	95023486	95023613	(19340715)	+	MIR	SINE/MIR	32	170	(92)	1099287
316	22.1	8.9	9.6	chr13	95563040	95563095	(18801233)	+	MIR	SINE/MIR	63	122	(140)	1100342
47	0.0	0.0	0.0	chr13	95563096	95563135	(18801193)	+	(CT)n	Simple_repeat	1	40	(0)	1100343
316	22.1	8.9	9.6	chr13	95563136	95563203	(18801125)	+	MIR	SINE/MIR	123	186	(76)	1100342
33	0.0	3.1	0.0	chr13	95563204	95563235	(18801093)	+	(AG)n	Simple_repeat	1	33	(0)	1100344
805	17.5	0.8	1.6	chr13	95637462	95637587	(18726741)	+	FLAM_A	SINE/Alu	5	129	(13)	1100461
1145	20.2	1.8	2.2	chr13	95637580	95637604	(18726724)	+	MLT1B	LTR/ERVL-MaLR	164	189	(201)	1100460
49	0.0	0.0	0.0	chr13	95637605	95637646	(18726682)	+	(TC)n	Simple_repeat	1	42	(0)	1100462
2481	12.3	5.7	5.0	chr13	95728666	95729168	(18635160)	C	L1PA2	LINE/L1	(4)	7001	6495	1100601
33	3.1	0.0	0.0	chr13	95729182	95729214	(18635114)	+	(TC)n	Simple_repeat	1	33	(0)	1100602
59	7.2	0.0	0.0	chr13	96765578	96765650	(17598678)	+	(CT)n	Simple_repeat	1	73	(0)	1102056
33	7.2	0.0	0.0	chr13	96851601	96851644	(17512684)	+	(CT)n	Simple_repeat	1	44	(0)	1102156
54	0.0	0.0	0.0	chr13	96851645	96851690	(17512638)	+	(CA)n	Simple_repeat	1	46	(0)	1102157
2129	19.1	6.6	1.6	chr13	96966965	96967453	(17396875)	+	HUERS-P3-int	LTR/ERV1	1	515	(8404)	1102313
16	5.2	0.0	0.0	chr13	96967513	96967532	(17396796)	+	(TC)n	Simple_repeat	1	20	(0)	1102314
326	33.6	2.2	0.0	chr13	97113146	97113279	(17251049)	+	MIRb	SINE/MIR	10	146	(122)	1102537
50	25.9	2.7	1.3	chr13	97113356	97113505	(17250823)	+	(CTTT)n	Simple_repeat	1	154	(0)	1102538
304	36.9	7.0	1.2	chr13	97486835	97487078	(16877250)	+	MLT1K	LTR/ERVL-MaLR	152	410	(185)	1103063
33	0.0	0.0	0.0	chr13	97487086	97487113	(16877215)	+	(AG)n	Simple_repeat	1	28	(0)	1103064
1778	13.9	9.3	0.4	chr13	97487206	97487478	(16876850)	C	AluSx	SINE/Alu	(12)	300	1	1103065
2713	6.7	0.0	0.0	chr13	97942459	97942757	(16421571)	C	AluY	SINE/Alu	(12)	299	1	1103747
317	30.8	6.1	4.5	chr13	97942904	97943080	(16421248)	C	MARNA	DNA/TcMar-Mariner	(347)	239	60	1103748
26	28.2	1.2	0.0	chr13	97976248	97976327	(16388001)	+	(CCCCGA)n	Simple_repeat	1	81	(0)	1103821
13	16.2	2.0	8.0	chr13	97976865	97976913	(16387415)	+	(CGGC)n	Simple_repeat	1	50	(0)	1103823
301	23.4	2.9	3.8	chr13	98110857	98110941	(16253387)	C	MLT1A	LTR/ERVL-MaLR	(119)	271	173	1104097
40	7.4	0.0	3.3	chr13	98110942	98111002	(16253326)	+	(AG)n	Simple_repeat	1	61	(0)	1104098
862	19.8	1.8	1.2	chr13	98111006	98111174	(16253154)	C	MLT1A	LTR/ERVL-MaLR	(200)	174	5	1104097
286	24.7	5.8	0.0	chr13	98275254	98275334	(16088994)	+	L1MC5	LINE/L1	9088	9173	(131)	1104419
35	0.0	0.0	0.0	chr13	98275337	98275366	(16088962)	+	(GA)n	Simple_repeat	1	30	(0)	1104420
22	14.9	0.0	0.0	chr13	98275369	98275405	(16088923)	+	(AT)n	Simple_repeat	1	37	(0)	1104421
338	13.2	0.0	0.0	chr13	98275406	98275458	(16088870)	+	L1MC5	LINE/L1	9172	9224	(80)	1104422
292	34.6	2.7	0.0	chr13	98507461	98507567	(15856761)	+	MIR3	SINE/MIR	98	207	(1)	1104738
3166	16.6	6.7	14.1	chr13	98509543	98510400	(15853928)	+	MER54B	LTR/ERVL	4	793	(0)	1104741
3066	13.8	4.2	6.4	chr13	99073010	99073307	(15291021)	+	LTR35	LTR/ERV1	198	490	(118)	1105642
63	2.2	9.6	0.0	chr13	99073308	99073401	(15290927)	+	(TC)n	Simple_repeat	1	103	(0)	1105644
3066	13.8	4.2	6.4	chr13	99073402	99073510	(15290818)	+	LTR35	LTR/ERV1	491	608	(0)	1105642
211	28.4	2.6	0.0	chr13	99600486	99600559	(14763769)	C	MIR3	SINE/MIR	(23)	185	110	1106520
14	21.8	6.8	3.8	chr13	99606673	99606758	(14757570)	+	(GGC)n	Simple_repeat	1	88	(0)	1106538
2203	11.4	0.7	0.7	chr13	99620497	99620795	(14743533)	+	AluSg	SINE/Alu	3	301	(9)	1106566
37	6.7	4.4	2.8	chr13	99620797	99620865	(14743463)	+	(AGAA)n	Simple_repeat	1	70	(0)	1106567
854	27.3	5.3	1.0	chr13	99681112	99681400	(14682928)	+	L1MC4	LINE/L1	7621	7922	(120)	1106658
17	21.2	0.0	5.5	chr13	99681401	99681455	(14682873)	+	(TATATC)n	Simple_repeat	1	55	(0)	1106659
333	19.3	1.7	14.3	chr13	99681484	99681584	(14682744)	+	L1MC4	LINE/L1	7913	8005	(37)	1106658
2197	12.0	0.3	0.0	chr13	99681585	99681885	(14682443)	C	AluSz	SINE/Alu	(10)	302	1	1106660
201	24.0	1.6	20.9	chr13	99847383	99847540	(14516788)	+	Tigger19b	DNA/TcMar-Tigger	149	275	(275)	1106941
27	26.4	2.3	0.0	chr13	99971151	99971236	(14393092)	+	GA-rich	Low_complexity	1	88	(0)	1107128
12	9.9	2.6	7.7	chr13	99972059	99972096	(14392232)	+	G-rich	Low_complexity	1	39	(0)	1107129
25	22.4	1.3	3.8	chr13	99981084	99981162	(14383166)	+	(CCTCCC)n	Simple_repeat	1	80	(0)	1107133
256	29.4	7.8	6.3	chr13	100392906	100393032	(13971296)	C	MIRc	SINE/MIR	(135)	133	2	1107893
286	23.9	14.2	0.0	chr13	100451542	100451650	(13912678)	+	L2a	LINE/L2	2400	2526	(893)	1107996
266	14.7	8.0	0.0	chr13	100451669	100452272	(13912056)	+	(CT)n	Simple_repeat	1	652	(0)	1107997
47	7.3	0.0	0.0	chr13	100474441	100474498	(13889830)	+	(TC)n	Simple_repeat	1	58	(0)	1108035
1963	12.5	2.8	1.1	chr13	100474502	100474780	(13889548)	C	AluJb	SINE/Alu	(28)	284	1	1108036
12	15.3	5.3	2.5	chr13	100588762	100588799	(13775529)	+	G-rich	Low_complexity	1	40	(0)	1108183
284	37.8	1.3	1.3	chr13	100711413	100711570	(13652758)	C	LTR85c	LTR/Gypsy?	(6)	817	660	1108370
24	14.4	4.3	0.0	chr13	100711693	100711739	(13652589)	+	(CT)n	Simple_repeat	1	49	(0)	1108371
1981	11.6	9.4	1.1	chr13	100719596	100719771	(13644557)	+	THE1D	LTR/ERVL-MaLR	1	206	(175)	1108388
44	2.4	0.0	0.0	chr13	100719772	100719813	(13644515)	+	(TC)n	Simple_repeat	1	42	(0)	1108389
1981	11.6	9.4	1.1	chr13	100719814	100719985	(13644343)	+	THE1D	LTR/ERVL-MaLR	207	380	(1)	1108388
99	14.9	4.4	0.9	chr13	101360046	101360250	(13004078)	+	(TTTC)n	Simple_repeat	1	214	(0)	1109298
1881	16.0	0.3	1.1	chr13	101360251	101360532	(13003796)	C	AluSz	SINE/Alu	(32)	280	1	1109299
57	1.9	0.0	0.0	chr13	102275235	102275287	(12089041)	+	(TC)n	Simple_repeat	1	53	(0)	1110555
39	2.7	0.0	0.0	chr13	102694864	102694901	(11669427)	+	(TC)n	Simple_repeat	1	38	(0)	1111135
28	3.1	0.0	0.0	chr13	102694902	102694934	(11669394)	+	(AC)n	Simple_repeat	1	33	(0)	1111136
16	0.0	0.0	0.0	chr13	103711987	103712004	(10652324)	+	(TG)n	Simple_repeat	1	18	(0)	1112544
89	8.8	0.0	0.0	chr13	103712004	103712125	(10652203)	+	(GA)n	Simple_repeat	1	122	(0)	1112545
1873	13.4	16.6	2.2	chr13	103712235	103712599	(10651729)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1112546
1124	22.6	8.8	5.3	chr13	106105116	106105293	(8259035)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	174	1115635
41	4.7	0.0	0.0	chr13	106105294	106105337	(8258991)	+	(AG)n	Simple_repeat	1	44	(0)	1115636
1124	22.6	8.8	5.3	chr13	106105338	106105518	(8258810)	C	MLT1A	LTR/ERVL-MaLR	(201)	173	2	1115635
14	8.1	3.9	0.0	chr13	106512996	106513021	(7851307)	+	(AAAG)n	Simple_repeat	1	27	(0)	1116185
45	9.4	5.4	0.0	chr13	107866711	107866802	(6497526)	+	(TC)n	Simple_repeat	1	97	(0)	1118022
20	7.0	3.3	0.0	chr13	107866900	107866929	(6497399)	+	(GA)n	Simple_repeat	1	31	(0)	1118023
12	13.3	2.7	5.3	chr13	107866955	107866991	(6497337)	+	G-rich	Low_complexity	1	38	(0)	1118024
1649	16.0	2.2	5.2	chr13	108971919	108972205	(5392123)	+	AluJb	SINE/Alu	1	278	(34)	1119469
53	0.0	0.0	0.0	chr13	108972206	108972250	(5392078)	+	(TC)n	Simple_repeat	1	45	(0)	1119470
17	18.8	5.4	1.7	chr13	110705974	110706029	(3658299)	+	(CCGCCCG)n	Simple_repeat	1	59	(0)	1121626
125	14.2	6.0	0.7	chr13	111033221	111033488	(3330840)	+	GA-rich	Low_complexity	1	284	(0)	1122073
11	21.6	0.0	4.9	chr13	111154010	111154050	(3210278)	+	G-rich	Low_complexity	1	41	(0)	1122233
240	34.2	6.4	4.4	chr13	112213488	112213716	(2150612)	C	UCON66	Unknown	(83)	482	249	1123285
135	16.8	0.0	0.0	chr13	112341477	112341705	(2022623)	+	(CT)n	Simple_repeat	1	229	(0)	1123384
27	3.4	0.0	0.0	chr13	112689836	112689865	(1674463)	+	(CCTCTGC)n	Simple_repeat	1	30	(0)	1123837
34	14.9	6.5	2.0	chr13	112689876	112689968	(1674360)	+	G-rich	Low_complexity	1	99	(0)	1123838
326	35.6	13.2	3.3	chr13	112849679	112849861	(1514467)	C	L2c	LINE/L2	(0)	3387	3172	1123991
1523	19.7	0.4	0.0	chr13	112852939	112853202	(1511126)	+	AluJr	SINE/Alu	1	265	(47)	1123993
20	18.4	0.0	0.0	chr13	112853211	112853247	(1511081)	+	(TC)n	Simple_repeat	1	37	(0)	1123994
138	26.3	1.5	0.8	chr13	113152581	113152974	(1211354)	+	GA-rich	Low_complexity	1	400	(0)	1124251
1765	17.3	8.2	0.6	chr13	113154796	113154988	(1209340)	+	MSTD	LTR/ERVL-MaLR	1	215	(181)	1124253
40	0.0	0.0	0.0	chr13	113154989	113155022	(1209306)	+	(TC)n	Simple_repeat	1	34	(0)	1124254
1765	17.3	8.2	0.6	chr13	113155023	113155189	(1209139)	+	MSTD	LTR/ERVL-MaLR	216	390	(6)	1124253
22726	6.3	1.1	1.4	chr13	113383173	113384521	(979807)	C	L1PB1	LINE/L1	(962)	5900	4554	1124619
12	15.8	2.6	5.0	chr13	113394174	113394212	(970116)	+	(GGCGG)n	Simple_repeat	1	40	(0)	1124636
379	22.1	1.9	3.7	chr13	113557690	113557797	(806531)	+	MER54B	LTR/ERVL	221	326	(467)	1124855
1863	20.9	3.0	10.9	chr13	113557924	113558466	(805862)	+	MER54B	LTR/ERVL	295	793	(0)	1124855
12	15.8	0.0	3.3	chr13	114281551	114281580	(82748)	+	G-rich	Low_complexity	1	30	(0)	1125453
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
657	1.4	0.0	0.0	chr14	20613399	20613472	(86430246)	C	tRNA-Pro-CCY	tRNA	(1)	74	1	1128342
3373	14.2	10.0	0.7	chr14	20624328	20624560	(86419158)	+	L1P1	LINE/L1	4314	4569	(1577)	1128363
41	23.3	6.2	0.0	chr14	20624562	20624690	(86419028)	+	GA-rich	Low_complexity	1	137	(0)	1128365
26	0.0	0.0	0.0	chr14	20816758	20816782	(86226936)	+	(T)n	Simple_repeat	1	25	(0)	1128654
75	28.6	2.4	2.6	chr14	20816783	20816902	(86226816)	+	GA-rich	Low_complexity	1	120	(0)	1128655
46	0.0	0.0	0.0	chr14	20816903	20816941	(86226777)	+	(AG)n	Simple_repeat	1	39	(0)	1128656
30	0.0	0.0	0.0	chr14	20816947	20816972	(86226746)	+	(AC)n	Simple_repeat	1	26	(0)	1128657
75	28.6	2.4	2.6	chr14	20816973	20817142	(86226576)	+	GA-rich	Low_complexity	126	295	(0)	1128658
26	15.2	3.9	0.0	chr14	21537081	21537131	(85506587)	+	(CT)n	Simple_repeat	1	53	(0)	1129952
391	21.7	0.0	7.8	chr14	21647510	21647599	(85396119)	C	MLT1F	LTR/ERVL-MaLR	(189)	380	298	1130189
49	2.2	0.0	0.0	chr14	21647611	21647656	(85396062)	+	(AG)n	Simple_repeat	1	46	(0)	1130190
76	0.0	2.8	0.0	chr14	22052300	22052371	(84991347)	+	(GA)n	Simple_repeat	1	74	(0)	1130676
40	0.0	2.6	0.0	chr14	22457169	22457206	(84586512)	+	(TC)n	Simple_repeat	1	39	(0)	1131204
34	31.1	3.5	1.7	chr14	23059221	23059391	(83984327)	+	(CGCTCC)n	Simple_repeat	1	177	(0)	1132233
59	1.6	3.2	0.0	chr14	23830014	23830075	(83213643)	+	(TC)n	Simple_repeat	1	64	(0)	1133410
21	0.0	0.0	0.0	chr14	23830092	23830114	(83213604)	+	(AT)n	Simple_repeat	1	23	(0)	1133411
529	32.5	7.9	5.2	chr14	23830156	23830424	(83213294)	C	L2c	LINE/L2	(1)	3386	3110	1133412
61	0.0	0.0	0.0	chr14	23928142	23928193	(83115525)	+	(TC)n	Simple_repeat	1	52	(0)	1133550
317	31.5	13.4	4.2	chr14	24011021	24011214	(83032504)	C	L1MEd	LINE/L1	(5881)	1205	1006	1133651
30	6.1	0.0	0.0	chr14	24011215	24011249	(83032469)	+	(TC)n	Simple_repeat	1	35	(0)	1133652
317	31.5	13.4	4.2	chr14	24011250	24011385	(83032333)	C	L1MEd	LINE/L1	(6081)	1005	841	1133651
188	30.6	3.1	0.0	chr14	24379540	24379601	(82664117)	C	L2b	LINE/L2	(82)	3305	3242	1134174
23	3.7	0.0	0.0	chr14	24379664	24379691	(82664027)	+	(TG)n	Simple_repeat	1	28	(0)	1134175
43	8.9	0.0	0.0	chr14	24379691	24379750	(82663968)	+	(GA)n	Simple_repeat	1	60	(0)	1134176
776	21.5	0.0	0.0	chr14	24379751	24379894	(82663824)	C	FRAM	SINE/Alu	(30)	146	3	1134177
276	29.0	5.3	4.6	chr14	29554849	29554978	(77488740)	+	LTR85b	LTR/Gypsy?	313	443	(341)	1140664
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
44	0.0	0.0	0.0	chr14	32540132	32540169	(74503549)	+	(CT)n	Simple_repeat	1	38	(0)	1145287
236	23.1	1.5	3.0	chr14	32687279	32687345	(74356373)	+	Eulor6D	DNA?	87	152	(150)	1145484
54	3.8	0.0	0.0	chr14	32687401	32687455	(74356263)	+	(TC)n	Simple_repeat	1	55	(0)	1145485
18267	13.1	2.3	0.9	chr14	32744617	32745461	(74298257)	C	L1MA2	LINE/L1	(4925)	2640	1756	1145542
70	4.2	0.0	0.0	chr14	32745462	32745534	(74298184)	+	(TC)n	Simple_repeat	1	73	(0)	1145546
18267	13.1	2.3	0.9	chr14	32745535	32746553	(74297165)	C	L1MA2	LINE/L1	(5810)	1755	732	1145542
57	5.8	0.0	0.0	chr14	32938453	32938524	(74105194)	+	(GA)n	Simple_repeat	1	72	(0)	1145777
14	9.1	0.0	0.0	chr14	34128184	34128207	(72915511)	+	(TGGA)n	Simple_repeat	1	24	(0)	1147290
32	5.2	0.0	0.0	chr14	34128206	34128245	(72915473)	+	(GA)n	Simple_repeat	1	40	(0)	1147291
182	17.9	15.2	0.0	chr14	34128308	34128363	(72915355)	C	L3	LINE/CR1	(900)	3199	3134	1147292
27	13.3	0.0	0.0	chr14	34170123	34170164	(72873554)	+	(TC)n	Simple_repeat	1	42	(0)	1147327
1058	18.5	12.2	0.9	chr14	34170165	34170451	(72873267)	+	MER33	DNA/hAT-Charlie	20	319	(5)	1147328
38	31.9	0.0	1.4	chr14	34370910	34371072	(72672646)	+	(TCTC)n	Simple_repeat	1	160	(0)	1147675
24	0.0	0.0	0.0	chr14	34371072	34371097	(72672621)	+	(CA)n	Simple_repeat	1	26	(0)	1147676
60	0.0	0.0	0.0	chr14	34371098	34371148	(72672570)	+	(CT)n	Simple_repeat	1	51	(0)	1147677
1910	14.8	5.3	0.0	chr14	34371168	34371437	(72672281)	+	AluSx	SINE/Alu	1	285	(27)	1147678
15	14.4	8.7	0.0	chr14	34685549	34685594	(72358124)	+	(TTTAACA)n	Simple_repeat	1	50	(0)	1148424
28	23.1	4.1	0.0	chr14	34685573	34685645	(72358073)	+	(AT)n	Simple_repeat	1	76	(0)	1148425
37	0.0	0.0	0.0	chr14	34685646	34685677	(72358041)	+	(AG)n	Simple_repeat	1	32	(0)	1148426
692	33.6	9.6	3.4	chr14	34685680	34686506	(72357212)	C	L2b	LINE/L2	(31)	3344	2468	1148427
21	6.9	0.0	0.0	chr14	35385690	35385738	(71657980)	+	(AGGG)n	Simple_repeat	1	49	(0)	1149930
48	0.0	0.0	0.0	chr14	36574803	36574843	(70468875)	+	(AG)n	Simple_repeat	1	41	(0)	1151791
19	4.3	0.0	0.0	chr14	36664180	36664203	(70379515)	+	(TC)n	Simple_repeat	1	24	(0)	1151896
16	15.5	2.8	0.0	chr14	36664204	36664215	(70379503)	+	(TCTTTC)n	Simple_repeat	1	37	(0)	1151897
314	36.6	4.4	1.7	chr14	36753730	36753907	(70289811)	C	L3	LINE/CR1	(3)	4096	3914	1152007
54	2.0	0.0	0.0	chr14	36753920	36753970	(70289748)	+	(AG)n	Simple_repeat	1	51	(0)	1152008
1484	16.7	1.7	1.4	chr14	36754060	36754373	(70289345)	+	MLT2B4	LTR/ERVL	7	326	(88)	1152009
32	9.6	0.0	0.0	chr14	36798893	36798937	(70244781)	+	(AG)n	Simple_repeat	1	45	(0)	1152066
370	27.5	9.7	2.3	chr14	36820490	36820641	(70223077)	+	MIR3	SINE/MIR	3	159	(49)	1152098
44	6.2	0.0	0.0	chr14	39016628	39016678	(68027040)	+	(TC)n	Simple_repeat	1	51	(0)	1154956
779	22.4	0.7	0.0	chr14	39016685	39016827	(68026891)	C	AluJr	SINE/Alu	(33)	279	136	1154957
66	6.0	2.3	0.0	chr14	39857216	39857301	(67186417)	+	(TC)n	Simple_repeat	1	88	(0)	1156246
5702	13.9	0.9	2.0	chr14	45262083	45262833	(61780885)	C	L1MA5A	LINE/L1	(180)	6117	5373	1162942
41	4.7	0.0	0.0	chr14	45262834	45262877	(61780841)	+	(CT)n	Simple_repeat	1	44	(0)	1162944
1984	12.7	0.4	1.4	chr14	45262881	45263156	(61780562)	C	AluSz	SINE/Alu	(39)	273	1	1162945
697	5.5	0.0	21.1	chr14	46630489	46630616	(60413102)	+	AluYk2	SINE/Alu	179	279	(32)	1164523
37	5.6	3.5	0.0	chr14	46630617	46630673	(60413045)	+	(GAGAGGA)n	Simple_repeat	1	59	(0)	1164524
350	26.1	9.4	10.2	chr14	46630679	46630883	(60412835)	C	MLT1D	LTR/ERVL-MaLR	(295)	210	8	1164522
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
1954	18.1	5.6	1.8	chr14	49880454	49880831	(57162887)	C	MER21C	LTR/ERVL	(18)	920	527	1168827
817	17.6	1.5	0.0	chr14	49880832	49880962	(57162756)	+	FLAM_C	SINE/Alu	1	133	(10)	1168828
50	0.0	2.2	0.0	chr14	50053614	50053659	(56990059)	+	(GA)n	Simple_repeat	1	47	(0)	1169176
56	0.0	0.0	0.0	chr14	50066270	50066317	(56977401)	+	(GA)n	Simple_repeat	1	48	(0)	1169201
280	11.9	6.7	0.0	chr14	50066320	50066361	(56977357)	+	MamRep137	DNA/TcMar-Tigger	87	131	(379)	1169202
547	30.3	14.1	0.8	chr14	50066361	50066623	(56977095)	+	MamRep137	DNA/TcMar-Tigger	159	462	(48)	1169203
2194	11.3	1.7	2.1	chr14	50259549	50259839	(56783879)	+	AluSz	SINE/Alu	3	292	(20)	1169632
13	16.8	2.8	2.7	chr14	50259940	50259975	(56783743)	+	G-rich	Low_complexity	1	37	(0)	1169633
34	11.0	3.3	0.0	chr14	50259976	50260012	(56783706)	+	(GAGA)n	Simple_repeat	4	78	(0)	1169634
777	34.0	5.2	2.8	chr14	50260051	50260368	(56783350)	C	L1MEd	LINE/L1	(6523)	580	255	1169620
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
19	11.5	2.6	0.0	chr14	50560764	50560801	(56482917)	+	(GGGCGGC)n	Simple_repeat	1	39	(0)	1170157
2117	12.1	1.0	2.5	chr14	50833659	50833973	(56209745)	C	AluSz	SINE/Alu	(2)	310	1	1170536
13	9.9	2.6	7.7	chr14	50833974	50833991	(56209727)	+	(TCTT)n	Simple_repeat	3	20	(0)	1170537
19	8.3	0.0	0.0	chr14	50834035	50834060	(56209658)	+	(GA)n	Simple_repeat	1	26	(0)	1170538
42088	4.8	0.5	1.6	chr14	53176229	53181383	(53862335)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	1	1174163
2023	13.8	0.3	0.7	chr14	53717156	53717444	(53326274)	+	AluJo	SINE/Alu	5	292	(20)	1174930
39	6.3	0.0	0.0	chr14	53717465	53717514	(53326204)	+	(GA)n	Simple_repeat	1	50	(0)	1174931
45	12.1	0.0	0.0	chr14	54249038	54249110	(52794608)	+	(GAGAGA)n	Simple_repeat	1	73	(0)	1175649
477	33.5	4.3	4.3	chr14	54249111	54249388	(52794330)	+	MER103C	DNA/hAT-Charlie	12	289	(8)	1175650
37	16.7	3.4	1.9	chr14	54489439	54489579	(52554139)	+	(TC)n	Simple_repeat	1	143	(0)	1175998
1992	13.8	0.7	1.1	chr14	54489580	54489854	(52553864)	C	AluJr	SINE/Alu	(38)	274	1	1175999
1738	7.8	0.0	5.0	chr14	55599464	55599721	(51443997)	C	AluSx1	SINE/Alu	(11)	301	57	1178001
51	3.9	0.0	0.0	chr14	56535382	56535434	(50508284)	+	(GA)n	Simple_repeat	1	53	(0)	1179348
1705	16.8	0.0	4.4	chr14	56895887	56896184	(50147534)	+	AluJo	SINE/Alu	1	285	(27)	1179920
42	4.6	0.0	0.0	chr14	56896185	56896229	(50147489)	+	(AG)n	Simple_repeat	1	45	(0)	1179921
1505	22.4	9.5	15.5	chr14	57275059	57275666	(49768052)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	2	1180535
1645	17.2	17.1	0.0	chr14	57895397	57895564	(49148154)	+	MSTA	LTR/ERVL-MaLR	1	207	(221)	1181328
43	8.6	0.0	0.0	chr14	57895565	57895626	(49148092)	+	(TCTC)n	Simple_repeat	1	62	(0)	1181329
1645	17.2	17.1	0.0	chr14	57895627	57895812	(49147906)	+	MSTA	LTR/ERVL-MaLR	208	427	(1)	1181328
197	39.4	4.2	1.4	chr14	58829597	58829735	(48213983)	+	L2b	LINE/L2	3045	3187	(188)	1182870
125	0.0	4.0	0.0	chr14	59417204	59417327	(47626391)	+	(TC)n	Simple_repeat	1	129	(0)	1183676
358	21.4	0.0	3.3	chr14	60331179	60331270	(46712448)	C	MER20B	DNA/hAT-Charlie	(639)	144	56	1184900
17	0.0	0.0	0.0	chr14	60331296	60331313	(46712405)	+	(CA)n	Simple_repeat	1	18	(0)	1184901
30	0.0	0.0	0.0	chr14	60331314	60331339	(46712379)	+	(CT)n	Simple_repeat	1	26	(0)	1184902
523	30.8	10.2	3.5	chr14	60491471	60491802	(46551916)	+	L2c	LINE/L2	2455	2817	(602)	1185087
29	6.3	0.0	0.0	chr14	60491803	60491836	(46551882)	+	(TC)n	Simple_repeat	1	34	(0)	1185092
523	30.8	10.2	3.5	chr14	60491837	60491904	(46551814)	+	L2c	LINE/L2	2818	2885	(534)	1185087
12	14.6	0.0	5.9	chr14	60653182	60653215	(46390503)	+	(CCTG)n	Simple_repeat	1	34	(0)	1185331
24	16.2	4.1	0.0	chr14	61189503	61189551	(45854167)	+	(TC)n	Simple_repeat	1	51	(0)	1186119
29	20.5	0.0	4.9	chr14	61189576	61189657	(45854061)	+	(TTCC)n	Simple_repeat	1	82	(0)	1186120
18	8.1	0.0	3.6	chr14	61724321	61724348	(45319370)	+	(AC)n	Simple_repeat	1	28	(0)	1186955
37	0.0	0.0	0.0	chr14	61724350	61724381	(45319337)	+	(TC)n	Simple_repeat	1	32	(0)	1186956
16	13.3	3.0	0.0	chr14	61724383	61724415	(45319303)	+	(CCCT)n	Simple_repeat	1	34	(0)	1186957
244	18.5	11.8	5.6	chr14	63526269	63526394	(43517324)	+	Charlie7a	DNA/hAT-Charlie	9	143	(129)	1189394
32	12.4	0.0	0.0	chr14	63526490	63526542	(43517176)	+	(CTCT)n	Simple_repeat	1	53	(0)	1189395
1963	16.2	0.0	2.2	chr14	63526547	63526860	(43516858)	C	AluJb	SINE/Alu	(5)	307	1	1189396
2080	10.2	0.0	0.0	chr14	63745122	63745386	(43298332)	+	AluSq2	SINE/Alu	1	265	(48)	1189941
43	16.7	3.4	4.7	chr14	63745387	63745514	(43298204)	+	GA-rich	Low_complexity	1	126	(0)	1189942
71	0.0	0.0	0.0	chr14	64704385	64704447	(42339271)	+	(CTCCCTCG)n	Simple_repeat	1	63	(0)	1191799
2290	10.7	0.3	0.0	chr14	65290444	65290741	(41752977)	C	AluSz	SINE/Alu	(13)	299	1	1192831
544	22.8	13.4	0.0	chr14	65290762	65290782	(41752936)	+	L2a	LINE/L2	3223	3243	(183)	1192828
56	1.9	0.0	0.0	chr14	65290783	65290834	(41752884)	+	(CT)n	Simple_repeat	1	52	(0)	1192832
36	16.9	0.0	0.0	chr14	65530798	65530865	(41512853)	+	(TCTC)n	Simple_repeat	1	68	(0)	1193331
227	21.9	0.6	0.4	chr14	67045358	67045856	(39997862)	+	(CTCTCT)n	Simple_repeat	1	502	(0)	1195373
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
24	6.9	0.0	0.0	chr14	68088590	68088620	(38955098)	+	(GT)n	Simple_repeat	1	31	(0)	1197207
29	20.3	1.6	0.0	chr14	68088620	68088681	(38955037)	+	GA-rich	Low_complexity	1	63	(0)	1197208
3327	20.6	7.0	1.9	chr14	68107251	68108794	(38934924)	+	L1MB7	LINE/L1	4394	6175	(9)	1197228
48	0.0	0.0	0.0	chr14	68156456	68156496	(38887222)	+	(TC)n	Simple_repeat	1	41	(0)	1197302
408	33.0	4.1	5.7	chr14	68216117	68216363	(38827355)	+	MIRb	SINE/MIR	3	245	(23)	1197390
462	30.6	7.0	0.0	chr14	68216333	68216479	(38827239)	C	MIRb	SINE/MIR	(16)	252	95	1197391
41	6.4	0.0	0.0	chr14	68342552	68342600	(38701118)	+	(TC)n	Simple_repeat	1	49	(0)	1197563
30	5.5	0.0	0.0	chr14	68548294	68548331	(38495387)	+	(GCCCA)n	Simple_repeat	1	38	(0)	1197866
20	24.3	0.0	0.0	chr14	68594243	68594287	(38449431)	+	GA-rich	Low_complexity	1	45	(0)	1197939
1255	19.2	12.9	0.0	chr14	68594464	68594713	(38449005)	C	AluJr4	SINE/Alu	(10)	302	16	1197940
83	21.6	0.0	1.1	chr14	68736191	68736367	(38307351)	+	GA-rich	Low_complexity	1	177	(0)	1198171
21	16.4	3.5	3.3	chr14	69152986	69153043	(37890675)	+	(CCG)n	Simple_repeat	1	60	(0)	1198957
39	2.7	0.0	0.0	chr14	69446948	69446985	(37596733)	+	(AG)n	Simple_repeat	1	38	(0)	1199535
1453	25.5	18.4	3.4	chr14	69446986	69447122	(37596596)	+	L1MC4	LINE/L1	7065	7222	(660)	1199531
1565	24.4	9.6	4.3	chr14	69757634	69757992	(37285726)	C	MLT1F	LTR/ERVL-MaLR	(4)	544	173	1200156
50	0.0	0.0	0.0	chr14	69757993	69758035	(37285683)	+	(GA)n	Simple_repeat	1	43	(0)	1200157
1565	24.4	9.6	4.3	chr14	69758036	69758189	(37285529)	C	MLT1F	LTR/ERVL-MaLR	(376)	172	1	1200156
13	17.4	0.0	2.9	chr14	69880165	69880198	(37163520)	+	G-rich	Low_complexity	1	34	(0)	1200350
48	14.7	6.0	0.0	chr14	70187253	70187352	(36856366)	+	GA-rich	Low_complexity	1	106	(0)	1200818
16	6.5	9.1	0.0	chr14	70187413	70187445	(36856273)	+	(ACC)n	Simple_repeat	1	36	(0)	1200819
120	26.7	6.7	0.8	chr14	70822242	70822735	(36220983)	+	(CT)n	Simple_repeat	1	527	(0)	1201805
2244	14.0	2.8	11.2	chr14	70880851	70881045	(36162673)	C	MSTB	LTR/ERVL-MaLR	(237)	189	1	1201913
939	17.8	7.3	1.5	chr14	70881046	70881099	(36162619)	+	MLT1B	LTR/ERVL-MaLR	134	203	(187)	1201912
72	1.5	0.0	0.0	chr14	70881100	70881165	(36162553)	+	(TC)n	Simple_repeat	1	66	(0)	1201915
939	17.8	7.3	1.5	chr14	70881166	70881315	(36162403)	+	MLT1B	LTR/ERVL-MaLR	204	351	(39)	1201912
13	11.0	0.0	6.1	chr14	71320402	71320434	(35723284)	+	G-rich	Low_complexity	1	33	(0)	1202618
14	19.5	0.0	2.7	chr14	71320464	71320500	(35723218)	+	(GTGA)n	Simple_repeat	1	37	(0)	1202619
203	37.1	3.0	5.8	chr14	71339682	71339784	(35703934)	C	MamRTE1	LINE/RTE-BovB	(206)	3606	3507	1202650
292	21.6	15.4	1.1	chr14	71339779	71339867	(35703851)	C	MIRb	SINE/MIR	(8)	260	157	1202651
1071	22.7	8.6	1.3	chr14	71521635	71521946	(35521772)	C	L1ME3	LINE/L1	(488)	5685	5349	1202955
677	24.7	9.9	1.0	chr14	71521937	71522398	(35521320)	C	L1MEd	LINE/L1	(4521)	1704	1189	1202958
41	29.9	1.2	3.5	chr14	73103191	73103373	(33940345)	+	G-rich	Low_complexity	1	178	(0)	1205529
29	37.1	0.7	0.7	chr14	73103291	73103439	(33940279)	+	(CGAGAC)n	Simple_repeat	1	150	(0)	1205530
56	1.6	0.0	0.0	chr14	73103909	73103948	(33939770)	+	(CT)n	Simple_repeat	1	40	(0)	1205533
55	0.0	0.0	0.0	chr14	73103949	73103995	(33939723)	+	(CA)n	Simple_repeat	1	47	(0)	1205534
56	1.6	0.0	0.0	chr14	73103996	73104020	(33939698)	+	(CT)n	Simple_repeat	1	25	(0)	1205535
15	36.1	0.0	1.3	chr14	73105973	73106051	(33937667)	+	A-rich	Low_complexity	1	79	(0)	1205540
15	17.1	0.0	2.9	chr14	73106003	73106037	(33937681)	+	GA-rich	Low_complexity	1	35	(0)	1205541
2786	13.6	4.3	2.7	chr14	73125189	73125672	(33918046)	C	LTR22B	LTR/ERVK	(0)	492	1	1205577
787	26.0	1.4	1.0	chr14	73162210	73162415	(33881303)	+	L1ME4b	LINE/L1	126	332	(560)	1205659
27	16.7	0.0	0.0	chr14	73162418	73162464	(33881254)	+	(CT)n	Simple_repeat	1	47	(0)	1205660
24	21.1	0.0	3.5	chr14	73162468	73162525	(33881193)	+	GA-rich	Low_complexity	1	58	(0)	1205661
719	22.4	3.4	0.7	chr14	73162526	73162668	(33881050)	+	AluJb	SINE/Alu	150	296	(16)	1205662
566	25.7	12.2	8.6	chr14	73398171	73398415	(33645303)	+	L1ME4a	LINE/L1	5720	5970	(154)	1206158
44	0.0	0.0	0.0	chr14	73398416	73398453	(33645265)	+	(GT)n	Simple_repeat	1	38	(0)	1206159
566	25.7	12.2	8.6	chr14	73398454	73398578	(33645140)	+	L1ME4a	LINE/L1	5971	6105	(19)	1206158
22	3.8	0.0	0.0	chr14	73477022	73477048	(33566670)	+	(CT)n	Simple_repeat	1	27	(0)	1206356
54	0.0	0.0	0.0	chr14	73477050	73477095	(33566623)	+	(AT)n	Simple_repeat	1	46	(0)	1206357
2439	8.7	0.0	0.3	chr14	73477096	73477406	(33566312)	C	AluSx1	SINE/Alu	(2)	310	1	1206358
53	4.6	0.0	0.0	chr14	74244983	74245029	(32798689)	+	(GA)n	Simple_repeat	1	47	(0)	1208098
40	2.6	0.0	0.0	chr14	74572285	74572323	(32471395)	+	(GT)n	Simple_repeat	1	39	(0)	1208757
16	0.0	0.0	0.0	chr14	74572324	74572341	(32471377)	+	(AG)n	Simple_repeat	1	18	(0)	1208758
34	7.0	0.0	0.0	chr14	75441119	75441163	(31602555)	+	(GA)n	Simple_repeat	1	45	(0)	1210464
1267	16.9	17.1	0.0	chr14	75517014	75517256	(31526462)	C	AluJb	SINE/Alu	(19)	293	1	1210612
2306	20.4	11.4	2.3	chr14	75517257	75517307	(31526411)	+	MLT1F1	LTR/ERVL-MaLR	111	179	(390)	1210611
51	2.1	0.0	0.0	chr14	75517308	75517355	(31526363)	+	(CT)n	Simple_repeat	1	48	(0)	1210613
2306	20.4	11.4	2.3	chr14	75517356	75517709	(31526009)	+	MLT1F1	LTR/ERVL-MaLR	180	568	(1)	1210611
23	6.3	0.0	2.8	chr14	75773905	75773927	(31269791)	+	(AT)n	Simple_repeat	2	24	(0)	1211062
81	2.6	0.0	0.0	chr14	75773928	75774005	(31269713)	+	(AG)n	Simple_repeat	1	78	(0)	1211063
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
641	19.9	8.1	2.3	chr14	76272233	76272407	(30771311)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	205	1211898
321	20.5	0.6	0.0	chr14	76272408	76273055	(30770663)	+	GA-rich	Low_complexity	1	652	(0)	1211899
18	12.2	0.0	0.0	chr14	76273060	76273086	(30770632)	+	(AC)n	Simple_repeat	1	27	(0)	1211900
306	22.4	8.4	0.9	chr14	76273098	76273235	(30770483)	C	MLT1B	LTR/ERVL-MaLR	(206)	159	5	1211898
49	0.0	0.0	0.0	chr14	76310979	76311020	(30732698)	+	(TC)n	Simple_repeat	1	42	(0)	1211970
31	7.4	0.0	0.0	chr14	76440548	76440590	(30603128)	+	(CCTT)n	Simple_repeat	1	43	(0)	1212200
27	0.0	0.0	0.0	chr14	76440658	76440683	(30603035)	+	(TTCC)n	Simple_repeat	1	26	(0)	1212201
35	11.6	0.0	0.0	chr14	76440684	76440740	(30602978)	+	(TC)n	Simple_repeat	1	57	(0)	1212202
1849	12.0	2.0	4.8	chr14	76440757	76441065	(30602653)	+	AluSz	SINE/Alu	1	300	(12)	1212203
62	1.8	0.0	0.0	chr14	76458426	76458482	(30585236)	+	(AC)n	Simple_repeat	1	57	(0)	1212246
56	3.6	0.0	0.0	chr14	76485627	76485683	(30558035)	+	(GA)n	Simple_repeat	1	57	(0)	1212304
153	0.5	5.6	0.0	chr14	76564713	76564908	(30478810)	+	(AG)n	Simple_repeat	1	207	(0)	1212480
35	8.8	0.0	0.0	chr14	76577992	76578039	(30465679)	+	(AG)n	Simple_repeat	1	48	(0)	1212512
14	20.1	2.0	4.0	chr14	76956446	76956494	(30087224)	+	(CCCCT)n	Simple_repeat	1	50	(0)	1213290
12	22.2	6.4	0.0	chr14	76956643	76956689	(30087029)	+	(GCCGGCC)n	Simple_repeat	1	50	(0)	1213291
628	9.9	0.8	11.5	chr14	76990136	76990183	(30053535)	C	L1MC1	LINE/L1	(450)	5883	5841	1213382
51	26.5	3.3	2.7	chr14	76990185	76990365	(30053353)	+	(TCTT)n	Simple_repeat	1	187	(0)	1213384
752	22.8	9.2	0.0	chr14	76990366	76990523	(30053195)	C	AluJo	SINE/Alu	(1)	311	138	1213385
19	7.8	4.5	4.3	chr14	77040280	77040323	(30003395)	+	GA-rich	Low_complexity	1	46	(0)	1213492
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
123	0.9	0.0	0.0	chr14	78082946	78083054	(28960664)	+	(AG)n	Simple_repeat	1	109	(0)	1215620
1235	20.0	5.7	1.5	chr14	79307420	79307688	(27736030)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	268	1217582
33	15.5	1.7	0.0	chr14	79307760	79307818	(27735900)	+	(CT)n	Simple_repeat	1	60	(0)	1217583
1792	16.9	5.6	2.9	chr14	79307853	79308231	(27735487)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1217584
47	19.3	1.9	0.0	chr14	79470854	79470951	(27572767)	+	GA-rich	Low_complexity	1	99	(0)	1217837
54	0.0	0.0	0.0	chr14	79470952	79470997	(27572721)	+	(GT)n	Simple_repeat	1	46	(0)	1217838
47	19.3	1.9	0.0	chr14	79470998	79471025	(27572693)	+	GA-rich	Low_complexity	79	108	(0)	1217839
327	19.8	4.2	5.2	chr14	79471049	79471144	(27572574)	+	MARNA	DNA/TcMar-Mariner	402	496	(90)	1217840
56	0.0	0.0	0.0	chr14	79486914	79486961	(27556757)	+	(TC)n	Simple_repeat	1	48	(0)	1217865
1760	18.7	4.0	0.8	chr14	80410332	80410502	(26633216)	+	MLT1A	LTR/ERVL-MaLR	1	176	(198)	1219163
51	2.1	0.0	0.0	chr14	80410503	80410550	(26633168)	+	(CT)n	Simple_repeat	1	48	(0)	1219164
29	0.0	0.0	3.1	chr14	81436222	81436253	(25607465)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	1220623
794	27.7	24.5	1.8	chr14	81510008	81510455	(25533263)	C	L2a	LINE/L2	(1126)	2293	1740	1220744
50	0.0	0.0	0.0	chr14	81510473	81510515	(25533203)	+	(TC)n	Simple_repeat	1	43	(0)	1220750
1148	27.2	7.7	1.8	chr14	89001167	89001496	(18042222)	C	MLT1G3	LTR/ERVL-MaLR	(6)	589	239	1231354
46	0.0	0.0	0.0	chr14	89001497	89001535	(18042183)	+	(AG)n	Simple_repeat	1	39	(0)	1231355
278	28.9	6.6	4.8	chr14	89067939	89068123	(17975595)	+	L1MEi	LINE/L1	893	1070	(1395)	1231472
34	3.0	0.0	0.0	chr14	89068124	89068157	(17975561)	+	(GA)n	Simple_repeat	1	34	(0)	1231473
278	28.9	6.6	4.8	chr14	89068158	89068240	(17975478)	+	L1MEi	LINE/L1	1071	1165	(1300)	1231472
412	20.0	3.7	1.2	chr14	89068220	89068338	(17975380)	+	L1ME3G	LINE/L1	183	285	(639)	1231474
2433	11.2	0.7	0.0	chr14	89885400	89885704	(17158014)	+	AluSc8	SINE/Alu	4	310	(1)	1232903
77	10.3	2.8	2.7	chr14	89885705	89885848	(17157870)	+	A-rich	Low_complexity	1	148	(0)	1232904
44	2.4	0.0	0.0	chr14	89919186	89919227	(17124491)	+	(GA)n	Simple_repeat	1	42	(0)	1232961
272	26.0	1.4	0.0	chr14	90140634	90140706	(16903012)	+	Tigger14a	DNA/TcMar-Tigger	114	187	(137)	1233338
232	36.6	11.4	4.8	chr14	90461511	90461803	(16581915)	C	L2b	LINE/L2	(2)	3373	3059	1233967
35	9.9	0.0	0.0	chr14	90461890	90461943	(16581775)	+	(ACAC)n	Simple_repeat	1	54	(0)	1233968
46	0.0	0.0	0.0	chr14	90461944	90461982	(16581736)	+	(AG)n	Simple_repeat	1	39	(0)	1233969
1627	20.9	0.3	2.5	chr14	90983323	90983637	(16060081)	+	AluSz	SINE/Alu	5	312	(0)	1234791
2933	26.0	12.7	9.3	chr14	90983638	90983781	(16059937)	+	Charlie24	DNA/hAT-Charlie	1299	1330	(1120)	1234787
57	1.9	0.0	0.0	chr14	90983788	90983840	(16059878)	+	(TC)n	Simple_repeat	1	53	(0)	1234792
2257	12.9	0.0	0.3	chr14	90983841	90984145	(16059573)	C	AluSx1	SINE/Alu	(8)	304	1	1234793
2173	10.9	0.0	0.0	chr14	91043945	91044219	(15999499)	+	AluSq2	SINE/Alu	1	275	(38)	1234907
102	23.8	0.0	0.5	chr14	91044220	91044441	(15999277)	+	GA-rich	Low_complexity	1	222	(0)	1234908
842	25.8	11.1	3.9	chr14	91044442	91044591	(15999127)	+	MLT1E2	LTR/ERVL-MaLR	138	346	(307)	1234906
1573	16.7	2.6	1.1	chr14	91076968	91077230	(15966488)	+	AluJb	SINE/Alu	6	272	(40)	1234985
86	28.5	2.7	2.6	chr14	91077233	91077254	(15966464)	+	polypurine	Low_complexity	1	23	(0)	1234986
30	3.5	0.0	0.0	chr14	91077255	91077284	(15966434)	+	(GA)n	Simple_repeat	1	30	(0)	1234987
86	28.5	2.7	2.6	chr14	91077285	91077471	(15966247)	+	GA-rich	Low_complexity	24	208	(0)	1234988
47	0.0	0.0	0.0	chr14	91108488	91108527	(15935191)	+	(TG)n	Simple_repeat	1	40	(0)	1235065
26	0.0	0.0	0.0	chr14	91108528	91108556	(15935162)	+	(AG)n	Simple_repeat	1	29	(0)	1235066
2023	13.5	0.4	0.0	chr14	91108557	91108837	(15934881)	C	AluSx	SINE/Alu	(30)	282	1	1235067
405	32.4	12.3	4.1	chr14	91154702	91155282	(15888436)	+	L2c	LINE/L2	2730	3354	(33)	1235179
247	31.2	0.0	3.1	chr14	91155295	91155390	(15888328)	C	MIR	SINE/MIR	(10)	252	160	1235184
700	14.2	1.6	0.0	chr14	91155392	91155511	(15888207)	+	MER21B	LTR/ERVL	1	122	(746)	1235185
455	24.9	5.1	7.7	chr14	91284705	91284926	(15758792)	+	MER113	DNA/hAT-Charlie	305	520	(1)	1235463
541	21.7	8.5	1.2	chr14	91377822	91377984	(15665734)	C	MLT1J	LTR/ERVL-MaLR	(224)	288	113	1235595
3471	25.3	5.8	8.2	chr14	91585289	91586504	(15457214)	C	L1MEf	LINE/L1	(5069)	1571	425	1235989
51	2.1	0.0	0.0	chr14	91586547	91586594	(15457124)	+	(GA)n	Simple_repeat	1	48	(0)	1235991
12	13.1	2.7	5.3	chr14	91836330	91836366	(15207352)	+	(CGCCGG)n	Simple_repeat	1	38	(0)	1236377
55	3.7	0.0	0.0	chr14	92252744	92252799	(14790919)	+	(TG)n	Simple_repeat	1	56	(0)	1237194
72	16.8	3.3	0.7	chr14	92252800	92252949	(14790769)	+	GA-rich	Low_complexity	1	155	(0)	1237195
38	19.1	0.0	0.0	chr14	92709878	92709954	(14333764)	+	GA-rich	Low_complexity	1	77	(0)	1238073
16	27.8	0.0	3.1	chr14	93788691	93788754	(13254964)	+	G-rich	Low_complexity	1	64	(0)	1240008
38	10.2	1.6	0.0	chr14	93858327	93858389	(13185329)	+	(TG)n	Simple_repeat	1	64	(0)	1240150
24	13.1	5.4	5.1	chr14	94174232	94174305	(12869413)	+	(CCCCG)n	Simple_repeat	1	78	(0)	1240752
12	0.0	0.0	5.0	chr14	94174472	94174491	(12869227)	+	(CCG)n	Simple_repeat	1	20	(0)	1240753
2191	17.7	2.0	7.5	chr14	94540415	94540842	(12502876)	+	LTR46	LTR/ERV1	6	404	(56)	1241303
46	0.0	0.0	0.0	chr14	94540843	94540881	(12502837)	+	(TC)n	Simple_repeat	1	39	(0)	1241304
2191	17.7	2.0	7.5	chr14	94540882	94540934	(12502784)	+	LTR46	LTR/ERV1	405	460	(0)	1241303
571	22.6	0.8	4.5	chr14	94540937	94541070	(12502648)	+	MER20	DNA/hAT-Charlie	89	217	(2)	1241305
346	19.5	7.1	1.5	chr14	94600946	94601030	(12442688)	C	MLT1F1	LTR/ERVL-MaLR	(244)	325	235	1241405
49	0.0	0.0	0.0	chr14	94601031	94601072	(12442646)	+	(AG)n	Simple_repeat	1	42	(0)	1241406
250	27.0	7.3	5.7	chr14	94601073	94601126	(12442592)	C	MLT1F1	LTR/ERVL-MaLR	(326)	234	183	1241405
41	31.1	1.8	2.3	chr14	94601127	94601295	(12442423)	+	GA-rich	Low_complexity	1	172	(0)	1241407
3014	20.7	5.0	5.7	chr14	94730775	94731636	(12312082)	+	L1MC3	LINE/L1	6871	7726	(59)	1241686
1302	22.9	4.7	2.8	chr14	94731641	94731835	(12311883)	C	MLT1A0	LTR/ERVL-MaLR	(4)	501	162	1241687
31	3.3	0.0	0.0	chr14	94731836	94731866	(12311852)	+	(AG)n	Simple_repeat	1	31	(0)	1241688
1302	22.6	4.9	2.9	chr14	94731867	94732024	(12311694)	C	MLT1A0	LTR/ERVL-MaLR	(204)	161	2	1241687
891	23.2	1.1	0.5	chr14	94911521	94911706	(12132012)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	188	1242097
65	9.3	1.1	0.0	chr14	94911732	94911824	(12131894)	+	(AG)n	Simple_repeat	1	94	(0)	1242098
705	15.9	11.7	1.3	chr14	94911825	94911977	(12131741)	C	MLT1A	LTR/ERVL-MaLR	(214)	176	6	1242097
2284	18.2	5.0	3.0	chr14	95037795	95038081	(12005637)	C	MLT2B2	LTR/ERVL	(6)	509	227	1242357
40	0.0	0.0	0.0	chr14	95038082	95038115	(12005603)	+	(GA)n	Simple_repeat	1	34	(0)	1242358
2284	18.2	5.0	3.0	chr14	95038116	95038297	(12005421)	C	MLT2B2	LTR/ERVL	(289)	226	31	1242357
762	27.2	7.7	3.9	chr14	95232769	95233078	(11810640)	C	L1ME3G	LINE/L1	(319)	605	283	1242632
386	27.8	5.0	2.5	chr14	95234987	95235104	(11808614)	C	HAL1b	LINE/L1	(14)	2407	2287	1242635
16	0.0	0.0	0.0	chr14	95235122	95235139	(11808579)	+	(CA)n	Simple_repeat	1	18	(0)	1242636
384	25.1	9.2	2.3	chr14	95235192	95235362	(11808356)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	1242637
304	27.3	7.8	9.4	chr14	95247811	95248085	(11795633)	+	MLT1J	LTR/ERVL-MaLR	269	538	(4)	1242662
225	29.5	3.9	1.6	chr14	95291821	95291944	(11751774)	+	L1ME4a	LINE/L1	5787	5913	(211)	1242733
481	30.3	3.9	2.8	chr14	95291965	95292144	(11751574)	C	MIR	SINE/MIR	(3)	259	78	1242734
54	1.8	3.5	0.0	chr14	95569367	95569424	(11474294)	+	(TC)n	Simple_repeat	1	60	(0)	1243263
2191	10.0	8.4	1.4	chr14	95654899	95655082	(11388636)	+	THE1D	LTR/ERVL-MaLR	1	192	(189)	1243456
50	0.0	0.0	0.0	chr14	95655083	95655125	(11388593)	+	(TC)n	Simple_repeat	1	43	(0)	1243457
2191	10.0	8.4	1.4	chr14	95655126	95655294	(11388424)	+	THE1D	LTR/ERVL-MaLR	193	381	(0)	1243456
672	20.9	7.3	2.3	chr14	95770193	95770351	(11273367)	+	MLT1B	LTR/ERVL-MaLR	15	175	(199)	1243687
59	11.0	0.0	0.0	chr14	95770360	95770449	(11273269)	+	(TCTCTC)n	Simple_repeat	1	90	(0)	1243689
1090	20.6	1.0	0.0	chr14	95770472	95770670	(11273048)	+	MLT1B	LTR/ERVL-MaLR	190	390	(0)	1243687
15	26.6	3.7	0.0	chr14	96502534	96502587	(10541131)	+	(GGC)n	Simple_repeat	1	56	(0)	1245031
24	13.0	0.0	0.0	chr14	96520829	96520870	(10522848)	+	(AGAG)n	Simple_repeat	1	42	(0)	1245067
303	13.7	0.0	0.0	chr14	96979046	96979096	(10064622)	C	MIRc	SINE/MIR	(20)	248	198	1245848
14	10.1	6.2	0.0	chr14	96979635	96979666	(10064052)	+	(TTCAGT)n	Simple_repeat	1	34	(0)	1245850
58	16.1	0.0	0.0	chr14	96983943	96984044	(10059674)	+	(CTGTT)n	Simple_repeat	1	102	(0)	1245855
2857	18.7	2.7	3.0	chr14	97032197	97032796	(10010922)	+	L1MB5	LINE/L1	5560	6157	(17)	1245948
34	3.0	0.0	0.0	chr14	97032799	97032832	(10010886)	+	(TC)n	Simple_repeat	1	34	(0)	1245949
59	1.9	0.0	0.0	chr14	97032849	97032903	(10010815)	+	(AG)n	Simple_repeat	1	55	(0)	1245950
38	11.0	0.0	0.0	chr14	97109989	97110048	(9933670)	+	(TC)n	Simple_repeat	1	60	(0)	1246106
17	0.0	0.0	0.0	chr14	97110051	97110072	(9933646)	+	(TCCC)n	Simple_repeat	1	22	(0)	1246107
30	3.1	0.0	0.0	chr14	97110074	97110106	(9933612)	+	(CTTC)n	Simple_repeat	1	33	(0)	1246108
681	29.8	11.1	0.6	chr14	97374640	97374803	(9668915)	+	L2a	LINE/L2	3238	3421	(5)	1246597
43	0.0	0.0	0.0	chr14	97374877	97374913	(9668805)	+	(AG)n	Simple_repeat	1	37	(0)	1246599
15	14.9	2.6	2.5	chr14	97374962	97375000	(9668718)	+	A-rich	Low_complexity	1	40	(0)	1246600
54	12.7	1.2	0.0	chr14	97871760	97871845	(9171873)	+	(GA)n	Simple_repeat	1	87	(0)	1247414
53	3.6	1.7	0.0	chr14	98137840	98137897	(8905821)	+	(CT)n	Simple_repeat	1	59	(0)	1247860
256	32.2	6.1	4.3	chr14	99122571	99122732	(7920986)	C	LTR78	LTR/ERV1	(13)	1291	1127	1249536
645	9.8	0.0	0.0	chr14	99122737	99122818	(7920900)	C	AluSz	SINE/Alu	(230)	82	1	1249537
26	21.4	0.0	0.0	chr14	99145237	99145290	(7898428)	+	(TC)n	Simple_repeat	1	54	(0)	1249581
325	31.9	9.1	5.5	chr14	99145291	99145460	(7898258)	C	L1M4c	LINE/L1	(5053)	1331	1159	1249582
38	5.7	3.6	0.0	chr14	99145461	99145516	(7898202)	+	(TCTCTCTCAA)n	Simple_repeat	1	58	(0)	1249583
325	31.9	9.1	5.5	chr14	99145517	99145673	(7898045)	C	L1M4c	LINE/L1	(5226)	1158	992	1249582
210	17.6	7.5	0.0	chr14	99253539	99253617	(7790101)	C	MIRb	SINE/MIR	(125)	143	51	1249731
24	3.6	0.0	0.0	chr14	99403427	99403455	(7640263)	+	(AC)n	Simple_repeat	1	29	(0)	1250007
46	2.3	0.0	0.0	chr14	99403456	99403499	(7640219)	+	(CT)n	Simple_repeat	1	44	(0)	1250008
19	13.1	8.0	0.0	chr14	99523174	99523223	(7520495)	+	G-rich	Low_complexity	1	54	(0)	1250149
195	25.2	0.0	0.0	chr14	99730315	99730381	(7313337)	C	MIR1_Amn	SINE/MIR	(100)	168	98	1250516
1999	16.0	0.6	1.3	chr14	99790848	99791159	(7252559)	C	AluJb	SINE/Alu	(2)	310	1	1250640
1567	16.4	0.4	0.8	chr14	99795943	99796186	(7247532)	+	AluJr	SINE/Alu	40	282	(30)	1250644
53	0.0	0.0	0.0	chr14	99796187	99796231	(7247487)	+	(AG)n	Simple_repeat	1	45	(0)	1250645
432	30.6	11.8	7.2	chr14	99821936	99822280	(7221438)	+	MamRTE1	LINE/RTE-BovB	3450	3812	(0)	1250693
43	10.8	1.4	0.0	chr14	100007765	100007834	(7035884)	+	(AGAG)n	Simple_repeat	1	71	(0)	1251005
1052	17.9	5.5	3.3	chr14	100007885	100008098	(7035620)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1251006
17	21.1	1.9	3.7	chr14	100238565	100238617	(6805101)	+	(GGC)n	Simple_repeat	1	54	(0)	1251500
217	28.6	3.5	2.3	chr14	100390884	100390969	(6652749)	+	MIR	SINE/MIR	172	258	(4)	1251782
285	32.0	13.2	1.5	chr14	100476592	100476791	(6566927)	+	MIRb	SINE/MIR	28	254	(14)	1251926
1421	21.9	10.7	3.6	chr14	100616680	100617256	(6426462)	+	MER77B	LTR/ERVL	3	666	(34)	1252153
66	4.9	1.2	0.0	chr14	100617400	100617484	(6426234)	+	(GA)n	Simple_repeat	1	86	(0)	1252154
51	0.0	0.0	0.0	chr14	101068088	101068131	(5975587)	+	(TC)n	Simple_repeat	1	44	(0)	1252707
191	29.7	9.0	1.1	chr14	101129972	101130063	(5913655)	C	MIR3	SINE/MIR	(5)	203	104	1252780
12	16.5	0.0	0.0	chr14	101130089	101130115	(5913603)	+	(CCAT)n	Simple_repeat	1	27	(0)	1252781
391	30.8	3.9	7.0	chr14	101130164	101130376	(5913342)	+	L1MEd	LINE/L1	1007	1212	(5874)	1252782
21	22.7	0.0	0.0	chr14	101130377	101130422	(5913296)	+	GA-rich	Low_complexity	1	46	(0)	1252783
405	26.8	6.7	7.2	chr14	101130428	101130636	(5913082)	+	L1MEd	LINE/L1	1007	1214	(5872)	1252782
1356	19.6	8.6	5.8	chr14	101215048	101215144	(5828574)	+	MLT1A	LTR/ERVL-MaLR	72	182	(192)	1252882
51	3.9	0.0	0.0	chr14	101215145	101215197	(5828521)	+	(CT)n	Simple_repeat	1	53	(0)	1252884
1356	19.6	8.6	5.8	chr14	101215198	101215384	(5828334)	+	MLT1A	LTR/ERVL-MaLR	183	373	(1)	1252882
1216	28.2	13.2	1.0	chr14	101960342	101960940	(5082778)	C	L2	LINE/L2	(1136)	2283	1601	1253956
650	23.2	4.0	1.2	chr14	102155116	102155285	(4888433)	+	MIRc	SINE/MIR	85	259	(9)	1254361
1931	9.8	1.0	8.7	chr14	102233835	102234169	(4809549)	+	LTR21A	LTR/ERV1	173	481	(0)	1254480
26826	16.2	3.2	3.8	chr14	102234170	102239533	(4804185)	+	HERVFH21-int	LTR/ERV1	1	5332	(1197)	1254480
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
16	0.0	0.0	0.0	chr14	102317173	102317189	(4726529)	+	(T)n	Simple_repeat	1	17	(0)	1254659
1756	16.5	0.4	3.2	chr14	103356696	103357022	(3686696)	C	AluJb	SINE/Alu	(0)	312	7	1256631
1430	23.1	3.0	7.5	chr14	103357023	103357050	(3686668)	+	MLT1A	LTR/ERVL-MaLR	182	189	(185)	1256630
100	2.4	6.9	0.0	chr14	103357051	103357180	(3686538)	+	(TC)n	Simple_repeat	1	139	(0)	1256632
1430	23.1	3.0	7.5	chr14	103357181	103357360	(3686358)	+	MLT1A	LTR/ERVL-MaLR	190	369	(5)	1256630
14	20.8	0.0	0.0	chr14	103385584	103385616	(3658102)	+	(CTC)n	Simple_repeat	1	33	(0)	1256713
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
23	27.9	0.0	2.5	chr14	103715302	103715382	(3328336)	+	(CCCGCC)n	Simple_repeat	1	81	(0)	1257364
253	26.8	13.4	6.0	chr14	103819722	103819872	(3223846)	+	MLT1M	LTR/ERVL-MaLR	502	665	(7)	1257563
413	29.5	4.5	0.7	chr14	103819880	103820029	(3223689)	C	MIRb	SINE/MIR	(108)	160	5	1257564
13	18.8	0.0	0.0	chr14	103847670	103847700	(3196018)	+	G-rich	Low_complexity	1	31	(0)	1257632
267	23.3	6.2	0.0	chr14	103847851	103847940	(3195778)	C	MIR1_Amn	SINE/MIR	(91)	139	44	1257633
20	7.0	3.3	0.0	chr14	104282933	104282962	(2760756)	+	(GA)n	Simple_repeat	1	31	(0)	1258264
216	14.6	7.8	0.0	chr14	104795935	104796005	(2247713)	+	MIR1_Amn	SINE/MIR	64	148	(82)	1258820
2028	10.3	0.7	0.7	chr14	105039253	105039557	(2004161)	C	AluSx	SINE/Alu	(0)	312	11	1259144
6448	13.7	15.2	12.6	chr14	105039558	105039940	(2003778)	+	MER4-int	LTR/ERV1	4081	4473	(2125)	1259133
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
318	32.4	8.1	4.8	chr14	105576771	105577020	(1466698)	C	HAL1b	LINE/L1	(1251)	1170	912	1259856
17	18.2	0.0	0.0	chr14	105577021	105577051	(1466667)	+	(TC)n	Simple_repeat	1	31	(0)	1259857
270	22.1	3.5	2.6	chr14	105577053	105577280	(1466438)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	782	1259858
38	14.7	0.0	0.0	chr14	105577286	105577353	(1466365)	+	(TCTCTC)n	Simple_repeat	1	68	(0)	1259859
327	31.4	10.7	7.7	chr14	105577870	105578418	(1465300)	C	HAL1	LINE/L1	(1206)	1301	881	1259861
279	20.2	0.0	5.7	chr14	105578425	105578634	(1465084)	C	HERVIP10FH-int	LTR/ERV1	(4099)	1003	806	1259862
240	24.9	4.8	2.3	chr14	105694938	105695853	(1347865)	+	(AGAGAC)n	Simple_repeat	1	960	(0)	1259949
1673	15.7	7.9	3.0	chr14	106230947	106231133	(812585)	+	THE1D	LTR/ERVL-MaLR	1	209	(172)	1260460
68	0.0	0.0	0.0	chr14	106231134	106231191	(812527)	+	(TC)n	Simple_repeat	1	58	(0)	1260461
1673	15.7	7.9	3.0	chr14	106231192	106231365	(812353)	+	THE1D	LTR/ERVL-MaLR	210	381	(0)	1260460
1272	29.4	6.5	2.8	chr14	106418450	106419117	(624601)	+	L1M3de	LINE/L1	1474	2169	(4600)	1260659
101	3.0	1.0	0.0	chr14	106419118	106419220	(624498)	+	(GA)n	Simple_repeat	1	104	(0)	1260660
1272	31.2	8.6	3.9	chr14	106419221	106419409	(624309)	+	L1M3de	LINE/L1	1881	2251	(4518)	1260659
351	15.2	24.0	0.0	chr15	23039047	23039138	(78952051)	C	AluJo	SINE/Alu	(191)	121	1	1266779
26	23.9	4.7	1.1	chr15	25999018	25999102	(75992087)	+	(CT)n	Simple_repeat	1	89	(0)	1270851
16	0.0	5.0	0.0	chr15	25999122	25999141	(75992048)	+	(CT)n	Simple_repeat	1	21	(0)	1270851
33	0.0	0.0	0.0	chr15	25999161	25999188	(75992001)	+	(TC)n	Simple_repeat	1	28	(0)	1270852
30	3.0	2.9	0.0	chr15	25999213	25999246	(75991943)	+	(CT)n	Simple_repeat	1	35	(0)	1270853
49	2.2	0.0	0.0	chr15	25999896	25999941	(75991248)	+	(CT)n	Simple_repeat	1	46	(0)	1270858
31	3.0	0.0	0.0	chr15	25999967	26000000	(75991189)	+	(TTCTC)n	Simple_repeat	1	34	(0)	1270859
91	1.8	7.0	0.0	chr15	26000003	26000116	(75991073)	+	(TC)n	Simple_repeat	1	122	(0)	1270860
12	16.9	2.9	2.8	chr15	26051885	26051919	(75939270)	+	(CTG)n	Simple_repeat	1	36	(0)	1270950
442	29.7	3.0	0.0	chr15	26051945	26052072	(75939117)	C	MIR	SINE/MIR	(43)	219	88	1270951
66	0.0	0.0	0.0	chr15	26486842	26486897	(75504292)	+	(AG)n	Simple_repeat	1	56	(0)	1271539
1194	30.5	5.9	7.1	chr15	26486898	26487533	(75503656)	+	HAL1	LINE/L1	421	1029	(1478)	1271538
26	8.9	0.0	0.0	chr15	26731052	26731087	(75260102)	+	(CT)n	Simple_repeat	1	36	(0)	1271822
84	9.7	3.2	2.5	chr15	27722650	27722799	(74268390)	+	(TTTC)n	Simple_repeat	2	152	(0)	1272985
365	29.8	10.0	1.4	chr15	27722804	27722831	(74268358)	+	L2a	LINE/L2	3185	3213	(213)	1272986
2174	13.2	0.6	0.3	chr15	27722832	27723142	(74268047)	C	AluSx	SINE/Alu	(0)	312	1	1272987
258	29.2	6.2	0.9	chr15	28955139	28955245	(73035944)	C	MER112	DNA/hAT-Charlie	(35)	226	114	1274786
314	33.3	2.4	1.6	chr15	28955337	28955461	(73035728)	C	MIR3	SINE/MIR	(62)	146	21	1274787
24	3.5	0.0	0.0	chr15	28984849	28984877	(73006312)	+	(CT)n	Simple_repeat	1	29	(0)	1274831
33	3.1	0.0	0.0	chr15	28984913	28984945	(73006244)	+	(CT)n	Simple_repeat	1	33	(0)	1274831
1828	15.4	1.4	12.7	chr15	29044797	29045048	(72946141)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	157	1274916
41	5.5	3.3	1.6	chr15	29045049	29045108	(72946081)	+	(CT)n	Simple_repeat	1	62	(0)	1274917
1946	10.1	0.0	4.7	chr15	29045112	29045389	(72945800)	C	AluSx3	SINE/Alu	(46)	265	1	1274918
28	7.5	4.7	0.0	chr15	29182648	29182690	(72808499)	+	(GA)n	Simple_repeat	1	45	(0)	1275071
608	28.3	20.4	2.8	chr15	29182719	29183153	(72808036)	+	L1M5	LINE/L1	4672	5184	(962)	1275068
903	17.7	5.1	3.4	chr15	29573329	29573603	(72417586)	C	LTR54	LTR/ERV1	(0)	434	171	1275660
53	8.2	2.5	0.0	chr15	29573604	29573682	(72417507)	+	(TC)n	Simple_repeat	1	81	(0)	1275661
903	17.5	7.7	9.6	chr15	29573683	29573856	(72417333)	C	LTR54	LTR/ERV1	(340)	170	5	1275660
1111	12.6	0.0	0.0	chr15	29588331	29588481	(72402708)	+	AluSx1	SINE/Alu	146	296	(16)	1275690
48	33.5	1.8	0.0	chr15	29588482	29588649	(72402540)	+	GA-rich	Low_complexity	1	171	(0)	1275691
708	27.0	4.7	5.6	chr15	29978383	29978723	(72012466)	C	HAL1	LINE/L1	(335)	2172	1835	1276327
52	3.1	3.0	0.0	chr15	29978725	29978791	(72012398)	+	(AG)n	Simple_repeat	1	69	(0)	1276328
234	10.0	0.0	4.8	chr15	29978795	29978836	(72012353)	C	MLT2C1	LTR/ERVL	(48)	515	476	1276329
44	10.7	4.1	0.0	chr15	29978879	29978951	(72012238)	+	(AG)n	Simple_repeat	1	76	(0)	1276330
1588	18.9	3.4	2.4	chr15	29978955	29979282	(72011907)	C	MLT2D	LTR/ERVL	(20)	534	55	1276331
1023	22.2	3.6	0.7	chr15	30325971	30326259	(71664930)	+	MSTB1	LTR/ERVL-MaLR	1	307	(158)	1276871
116	15.3	0.0	0.5	chr15	30326260	30326456	(71664733)	+	(CT)n	Simple_repeat	1	197	(0)	1276872
1207	16.3	3.5	0.5	chr15	30326457	30326678	(71664511)	+	MSTB1	LTR/ERVL-MaLR	204	432	(0)	1276871
9360	16.0	5.8	5.3	chr15	31450102	31450382	(70540807)	C	ERVL-B4-int	LTR/ERVL	(1678)	4036	3781	1278623
19	0.0	0.0	0.0	chr15	31450383	31450403	(70540786)	+	(GA)n	Simple_repeat	1	21	(0)	1278625
31	16.6	2.8	1.4	chr15	31450411	31450481	(70540708)	+	G-rich	Low_complexity	1	73	(0)	1278626
1505	19.9	4.8	1.2	chr15	31450497	31450841	(70540348)	C	MLT2D	LTR/ERVL	(36)	378	21	1278627
1403	20.3	5.4	4.9	chr15	31880064	31880236	(70110953)	+	MLT1A	LTR/ERVL-MaLR	1	179	(195)	1279134
74	5.1	0.0	0.0	chr15	31880237	31880317	(70110872)	+	(TC)n	Simple_repeat	1	81	(0)	1279135
2166	13.4	0.3	1.4	chr15	33221793	33222082	(68769107)	+	AluJb	SINE/Alu	3	289	(23)	1281042
65	0.0	0.0	0.0	chr15	33222089	33222143	(68769046)	+	(AG)n	Simple_repeat	1	55	(0)	1281043
4462	15.1	7.8	5.0	chr15	33222144	33223673	(68767516)	+	L1PB3	LINE/L1	4184	6522	(335)	1281037
388	25.6	5.2	1.2	chr15	33236679	33236795	(68754394)	+	MIR	SINE/MIR	5	125	(137)	1281075
59	0.0	0.0	0.0	chr15	33236817	33236866	(68754323)	+	(GA)n	Simple_repeat	1	50	(0)	1281076
96	8.2	2.1	0.0	chr15	33310310	33310451	(68680738)	+	(TC)n	Simple_repeat	1	145	(0)	1281192
49	0.0	0.0	0.0	chr15	33310454	33310495	(68680694)	+	(CA)n	Simple_repeat	1	42	(0)	1281193
21	20.9	0.0	0.0	chr15	33705056	33705096	(68286093)	+	(AC)n	Simple_repeat	1	41	(0)	1281676
40	2.6	0.0	0.0	chr15	33705097	33705135	(68286054)	+	(CT)n	Simple_repeat	1	39	(0)	1281677
30	0.0	0.0	0.0	chr15	33933492	33933524	(68057665)	+	(CA)n	Simple_repeat	1	33	(0)	1281974
67	0.0	0.0	0.0	chr15	33933525	33933581	(68057608)	+	(AG)n	Simple_repeat	1	57	(0)	1281975
2105	13.8	0.0	0.0	chr15	33933678	33933959	(68057230)	+	AluSz6	SINE/Alu	2	283	(29)	1281976
904	15.4	0.0	3.6	chr15	34371587	34371754	(67619435)	+	MLT1A0	LTR/ERVL-MaLR	1	162	(212)	1282760
44	15.3	0.0	0.0	chr15	34371755	34371830	(67619359)	+	GA-rich	Low_complexity	1	76	(0)	1282761
1083	16.6	1.1	0.5	chr15	34371862	34372049	(67619140)	+	MLT1A0	LTR/ERVL-MaLR	177	365	(0)	1282760
61	0.0	0.0	0.0	chr15	34515281	34515332	(67475857)	+	(CT)n	Simple_repeat	1	52	(0)	1282968
38	0.0	0.0	0.0	chr15	34515333	34515374	(67475815)	+	(GT)n	Simple_repeat	1	42	(0)	1282969
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
56	7.1	0.0	0.0	chr15	35016395	35016468	(66974721)	+	(GA)n	Simple_repeat	1	74	(0)	1283790
47	2.3	0.0	0.0	chr15	35194370	35194414	(66796775)	+	(AG)n	Simple_repeat	1	45	(0)	1284089
4387	18.2	2.0	4.4	chr15	35568749	35569459	(66421730)	C	L1MB1	LINE/L1	(3)	6165	5475	1284536
48	0.0	0.0	0.0	chr15	35569460	35569500	(66421689)	+	(TG)n	Simple_repeat	1	41	(0)	1284537
6432	15.8	2.4	1.4	chr15	35569501	35570794	(66420395)	C	L1MB1	LINE/L1	(694)	5474	4160	1284536
183	21.7	0.0	8.0	chr15	36501319	36501368	(65489821)	C	Tigger19b	DNA/TcMar-Tigger	(384)	166	121	1285736
42	0.0	0.0	0.0	chr15	36722304	36722339	(65268850)	+	(TC)n	Simple_repeat	1	36	(0)	1286050
24	9.6	5.3	2.0	chr15	36877891	36877944	(65113245)	+	GA-rich	Low_complexity	1	55	(0)	1286244
23	2.9	8.6	0.0	chr15	36877986	36878020	(65113169)	+	(GA)n	Simple_repeat	1	38	(0)	1286245
12	8.9	4.2	0.0	chr15	37102047	37102070	(64889119)	+	(GGAG)n	Simple_repeat	1	25	(0)	1286517
66	3.0	1.4	0.0	chr15	37111300	37111368	(64879821)	+	(TC)n	Simple_repeat	1	70	(0)	1286532
112	8.5	2.9	3.8	chr15	37133083	37133287	(64857902)	+	(CTTT)n	Simple_repeat	1	211	(0)	1286565
30	0.0	2.8	0.0	chr15	37166347	37166382	(64824807)	+	(CA)n	Simple_repeat	1	37	(0)	1286607
57	0.0	0.0	0.0	chr15	37166383	37166431	(64824758)	+	(AG)n	Simple_repeat	1	49	(0)	1286608
694	30.7	8.2	7.3	chr15	38105528	38105691	(63885498)	+	LTR33	LTR/ERVL	1	185	(330)	1287754
42	0.0	0.0	0.0	chr15	38105692	38105727	(63885462)	+	(GA)n	Simple_repeat	1	36	(0)	1287755
694	30.7	8.2	7.3	chr15	38105728	38106068	(63885121)	+	LTR33	LTR/ERVL	186	510	(5)	1287754
820	13.4	16.7	2.4	chr15	39876658	39876821	(62114368)	+	AluJb	SINE/Alu	96	287	(25)	1290310
53	13.8	0.0	0.0	chr15	39876822	39876909	(62114280)	+	(GAGA)n	Simple_repeat	1	88	(0)	1290311
33	7.5	0.0	0.0	chr15	40092435	40092476	(61898713)	+	(AC)n	Simple_repeat	1	42	(0)	1290671
328	28.5	17.5	0.1	chr15	40096464	40096674	(61894515)	C	MIRc	SINE/MIR	(6)	262	21	1290679
12	26.4	0.0	5.5	chr15	40323531	40323585	(61667604)	+	(GGCTCCC)n	Simple_repeat	1	55	(0)	1291015
189	31.8	18.7	0.0	chr15	40391653	40391778	(61599411)	C	Tigger19b	DNA/TcMar-Tigger	(4)	546	392	1291104
14	13.1	0.0	0.0	chr15	41231305	41231330	(60759859)	+	(CCCT)n	Simple_repeat	1	26	(0)	1292845
206	26.9	5.6	0.0	chr15	41241366	41241432	(60749757)	C	MIR	SINE/MIR	(1)	261	191	1292864
2002	15.5	0.0	0.3	chr15	41599595	41599885	(60391304)	C	AluJr4	SINE/Alu	(22)	290	1	1293710
81	0.0	0.0	0.0	chr15	41599887	41599955	(60391234)	+	(TC)n	Simple_repeat	1	69	(0)	1293711
52	7.2	0.0	0.0	chr15	42221259	42221331	(59769858)	+	(GAGAGA)n	Simple_repeat	1	73	(0)	1294749
1433	20.4	7.6	7.9	chr15	42560160	42560386	(59430803)	+	L1MC4	LINE/L1	7684	7899	(143)	1295360
36	0.0	2.9	0.0	chr15	42560387	42560420	(59430769)	+	(AG)n	Simple_repeat	1	35	(0)	1295363
1433	20.4	7.6	7.9	chr15	42560421	42560541	(59430648)	+	L1MC4	LINE/L1	7900	8042	(0)	1295360
17	14.2	0.0	0.0	chr15	42581660	42581690	(59409499)	+	(CAG)n	Simple_repeat	1	31	(0)	1295404
904	19.2	6.0	0.0	chr15	42622133	42622288	(59368901)	+	AluJo	SINE/Alu	137	302	(10)	1295493
36	5.2	0.0	0.0	chr15	42622339	42622378	(59368811)	+	(CT)n	Simple_repeat	1	40	(0)	1295494
935	19.9	1.3	0.0	chr15	42622379	42622529	(59368660)	C	AluJr	SINE/Alu	(23)	289	137	1295495
16	0.0	0.0	0.0	chr15	44196690	44196706	(57794483)	+	(T)n	Simple_repeat	1	17	(0)	1298356
45	2.4	0.0	0.0	chr15	44196733	44196775	(57794414)	+	(TC)n	Simple_repeat	1	43	(0)	1298357
2493	8.2	0.0	0.7	chr15	44515589	44515882	(57475307)	+	AluSp	SINE/Alu	1	292	(21)	1299075
14	8.9	0.0	0.0	chr15	44515897	44515920	(57475269)	+	(GGTT)n	Simple_repeat	1	24	(0)	1299076
31	16.4	1.6	0.0	chr15	44515911	44515972	(57475217)	+	(TTCT)n	Simple_repeat	1	63	(0)	1299077
2192	12.5	5.5	0.3	chr15	44515973	44516267	(57474922)	C	AluSz	SINE/Alu	(1)	311	1	1299078
1621	11.6	0.0	6.4	chr15	44889324	44889574	(57101615)	+	AluSz	SINE/Alu	1	235	(77)	1299704
42	7.2	1.7	0.0	chr15	44889576	44889634	(57101555)	+	(AG)n	Simple_repeat	1	60	(0)	1299705
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
2150	14.2	4.1	15.8	chr15	45345099	45345266	(56645923)	+	MLT2C2	LTR/ERVL	265	403	(61)	1300492
50	0.0	0.0	0.0	chr15	45345267	45345309	(56645880)	+	(TC)n	Simple_repeat	1	43	(0)	1300494
2150	14.2	4.1	15.8	chr15	45345310	45345422	(56645767)	+	MLT2C2	LTR/ERVL	404	464	(0)	1300492
1858	13.4	3.1	1.7	chr15	45626920	45627209	(56363980)	C	AluSx1	SINE/Alu	(18)	294	1	1301054
5047	13.9	2.3	3.3	chr15	45627210	45627278	(56363911)	C	L1M4c	LINE/L1	(5308)	1076	1011	1301053
39	16.9	0.0	0.0	chr15	45627279	45627346	(56363843)	+	(CT)n	Simple_repeat	1	68	(0)	1301055
402	21.7	17.9	0.0	chr15	45627353	45627444	(56363745)	C	FLAM_A	SINE/Alu	(30)	112	1	1301056
4486	14.9	2.2	1.2	chr15	45627445	45628203	(56362986)	C	L1M4c	LINE/L1	(5353)	1031	265	1301053
17	0.0	0.0	0.0	chr15	47586889	47586907	(54404282)	+	(T)n	Simple_repeat	1	19	(0)	1303596
39	11.2	0.0	0.0	chr15	47601077	47601134	(54390055)	+	(AG)n	Simple_repeat	1	58	(0)	1303613
225	28.2	4.1	1.4	chr15	47727818	47727889	(54263300)	+	CR1-13_AMi	LINE/CR1	511	584	(140)	1303794
20036	10.2	1.9	3.1	chr15	48688227	48691079	(53300110)	+	L1MA3	LINE/L1	4919	7723	(1)	1305173
1800	17.7	0.7	2.4	chr15	48895802	48896095	(53095094)	+	AluJo	SINE/Alu	2	290	(22)	1305495
70	19.1	0.0	0.0	chr15	48896181	48896312	(53094877)	+	(TCTC)n	Simple_repeat	1	132	(0)	1305496
2583	9.4	0.3	0.0	chr15	48896313	48896619	(53094570)	C	AluSx1	SINE/Alu	(4)	308	1	1305497
30	0.0	0.0	0.0	chr15	49422121	49422146	(52569043)	+	(AG)n	Simple_repeat	1	26	(0)	1306211
18	31.6	0.0	0.0	chr15	49422147	49422193	(52568996)	+	(TG)n	Simple_repeat	1	47	(0)	1306212
31	25.1	2.4	0.0	chr15	49438835	49438916	(52552273)	+	GA-rich	Low_complexity	1	84	(0)	1306232
1605	23.3	4.5	5.2	chr15	49438919	49439512	(52551677)	C	MLT1F1	LTR/ERVL-MaLR	(3)	566	3	1306233
2206	11.0	1.3	2.3	chr15	50072614	50072921	(51918268)	C	AluSx4	SINE/Alu	(4)	306	2	1307059
70	0.0	0.0	0.0	chr15	50072922	50072981	(51918208)	+	(CT)n	Simple_repeat	1	60	(0)	1307060
292	29.2	14.0	3.8	chr15	52257594	52257803	(49733386)	C	MIR	SINE/MIR	(15)	247	13	1310997
14	23.8	2.8	5.5	chr15	52295645	52295715	(49695474)	+	G-rich	Low_complexity	1	73	(0)	1311056
421	32.4	10.1	5.1	chr15	52418337	52418590	(49572599)	C	L2c	LINE/L2	(0)	3387	3120	1311247
36	8.5	0.0	0.0	chr15	52418721	52418770	(49572419)	+	(AG)n	Simple_repeat	1	50	(0)	1311248
297	37.4	8.6	2.4	chr15	52418880	52419249	(49571940)	C	Plat_L3	LINE/CR1	(743)	2843	2449	1311249
257	22.9	5.0	2.0	chr15	52773137	52773234	(49217955)	+	L1MC4	LINE/L1	6391	6491	(1391)	1311863
21	4.0	0.0	0.0	chr15	52773235	52773260	(49217929)	+	(AG)n	Simple_repeat	1	26	(0)	1311864
1621	26.6	4.8	6.3	chr15	52773267	52773897	(49217292)	+	L1MC4	LINE/L1	6490	7110	(932)	1311863
1450	17.8	2.8	7.9	chr15	55706471	55706774	(46284415)	+	AluJr4	SINE/Alu	1	288	(24)	1316027
187	30.5	1.2	11.6	chr15	55706783	55706887	(46284302)	C	L2	LINE/L2	(438)	2981	2897	1316028
609	20.5	8.5	3.2	chr15	55706888	55707043	(46284146)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	1316029
506	27.3	12.2	0.0	chr15	55713998	55714169	(46277020)	C	L1MEi	LINE/L1	(2011)	201	6	1316040
33	0.0	0.0	0.0	chr15	55714206	55714233	(46276956)	+	(TC)n	Simple_repeat	1	28	(0)	1316041
1729	16.8	0.0	2.1	chr15	55714245	55714529	(46276660)	C	AluJr	SINE/Alu	(32)	280	2	1316042
16	8.3	0.0	0.0	chr15	55777063	55777088	(46214101)	+	(GGGA)n	Simple_repeat	1	26	(0)	1316172
38	5.0	0.0	0.0	chr15	55777089	55777130	(46214059)	+	(GA)n	Simple_repeat	1	42	(0)	1316173
484	29.3	3.5	1.2	chr15	55823488	55823656	(46167533)	+	MER124	DNA?	9	181	(216)	1316269
334	27.5	19.8	0.0	chr15	55825373	55825510	(46165679)	+	MIRb	SINE/MIR	81	252	(16)	1316272
3111	18.6	4.4	6.0	chr15	55939507	55940423	(46050766)	+	L1MB1	LINE/L1	5298	6176	(2)	1316452
20	11.2	5.0	0.0	chr15	55940476	55940515	(46050674)	+	(CCTC)n	Simple_repeat	1	42	(0)	1316457
36	2.1	3.9	3.8	chr15	55940519	55940569	(46050620)	+	(TC)n	Simple_repeat	1	53	(0)	1316458
923	23.0	6.1	4.4	chr15	55940596	55940821	(46050368)	C	AluJr	SINE/Alu	(82)	230	1	1316459
10050	17.3	3.2	2.5	chr15	56298954	56300685	(45690504)	+	L1MA3	LINE/L1	24	1753	(5812)	1316967
66	1.7	0.0	0.0	chr15	56300686	56300746	(45690443)	+	(AG)n	Simple_repeat	1	61	(0)	1316968
10050	11.6	12.3	2.5	chr15	56300747	56302207	(45688982)	+	L1MA3	LINE/L1	1754	3399	(4166)	1316967
483	32.7	7.3	2.4	chr15	56736260	56736547	(45254642)	C	MamRep605	LTR?	(122)	727	425	1317511
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
128	14.2	1.8	0.4	chr15	57007751	57007976	(44983213)	+	(TTTC)n	Simple_repeat	1	230	(0)	1318004
1466	16.9	0.7	6.9	chr15	57007984	57008273	(44982916)	C	AluJo	SINE/Alu	(39)	273	2	1318005
79	7.1	0.0	1.8	chr15	57075754	57075863	(44915326)	+	(TTTC)n	Simple_repeat	1	110	(0)	1318113
1817	17.4	3.0	0.3	chr15	57075866	57076153	(44915036)	C	AluJo	SINE/Alu	(14)	298	3	1318114
80	3.2	0.0	3.9	chr15	57087008	57087110	(44904079)	+	(TCTCCCTCTG)n	Simple_repeat	1	103	(0)	1318137
1856	14.2	0.7	0.0	chr15	57087161	57087427	(44903762)	+	AluJo	SINE/Alu	30	298	(14)	1318138
15	9.3	0.0	0.0	chr15	57915363	57915374	(44075815)	+	(C)n	Simple_repeat	1	12	(0)	1319389
37	5.1	0.0	0.0	chr15	57915375	57915415	(44075774)	+	(CT)n	Simple_repeat	1	41	(0)	1319390
13	15.7	0.0	7.3	chr15	58038731	58038771	(43952418)	+	(TGGTAA)n	Simple_repeat	1	41	(0)	1319529
1990	27.4	8.9	9.0	chr15	58215738	58216572	(43774617)	C	L1MC4	LINE/L1	(131)	7911	7074	1319784
37	8.5	0.0	0.0	chr15	58216573	58216622	(43774567)	+	(CT)n	Simple_repeat	1	50	(0)	1319785
1990	27.4	8.9	9.0	chr15	58216623	58216772	(43774417)	C	L1MC4	LINE/L1	(969)	7073	6928	1319784
517	30.4	8.1	7.0	chr15	58307275	58307532	(43683657)	C	L2c	LINE/L2	(1)	3386	3126	1319944
30	3.5	0.0	0.0	chr15	58307615	58307644	(43683545)	+	(AG)n	Simple_repeat	1	30	(0)	1319945
502	28.1	11.2	1.9	chr15	58307698	58307955	(43683234)	+	LTR90A	LTR	686	970	(6)	1319946
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
993	8.3	0.0	0.0	chr15	59191175	59191294	(42799895)	+	AluSx3	SINE/Alu	2	121	(190)	1321597
45	2.4	0.0	0.0	chr15	59191327	59191369	(42799820)	+	(AG)n	Simple_repeat	1	43	(0)	1321598
10829	7.4	1.8	0.9	chr15	59784826	59786415	(42204774)	+	L1PB	LINE/L1	3724	5326	(820)	1322747
44	11.1	0.0	0.0	chr15	59795216	59795284	(42195905)	+	(GAGAGA)n	Simple_repeat	1	69	(0)	1322763
267	30.8	0.0	0.0	chr15	59896677	59896741	(42094448)	C	LFSINE_Vert	SINE/tRNA	(263)	196	132	1322929
33	17.9	0.0	0.0	chr15	59997468	59997526	(41993663)	+	GA-rich	Low_complexity	1	59	(0)	1323096
16	25.4	1.7	3.3	chr15	60004161	60004220	(41986969)	+	(CCT)n	Simple_repeat	1	61	(0)	1323102
23385	8.2	2.8	0.2	chr15	60331601	60335816	(41655373)	+	L1PA3	LINE/L1	1840	6154	(1)	1323622
398	11.7	0.0	1.6	chr15	60335828	60335888	(41655301)	+	L1MC3	LINE/L1	6797	6856	(929)	1323624
30	6.0	0.0	0.0	chr15	60335890	60335924	(41655265)	+	(TC)n	Simple_repeat	1	35	(0)	1323625
4366	18.4	4.7	4.2	chr15	60335926	60335970	(41655219)	+	L1MC3	LINE/L1	6814	6856	(929)	1323624
44	2.4	0.0	0.0	chr15	60335971	60336012	(41655177)	+	(TC)n	Simple_repeat	1	42	(0)	1323626
4366	18.4	4.7	4.2	chr15	60336013	60336927	(41654262)	+	L1MC3	LINE/L1	6857	7779	(6)	1323624
36	0.0	0.0	0.0	chr15	60398994	60399024	(41592165)	+	(GA)n	Simple_repeat	1	31	(0)	1323708
253	23.5	0.0	2.9	chr15	60399038	60399107	(41592082)	C	HERVFH21-int	LTR/ERV1	(6452)	77	10	1323709
22	0.0	0.0	0.0	chr15	60399128	60399151	(41592038)	+	(GT)n	Simple_repeat	1	24	(0)	1323710
20	32.9	1.5	0.0	chr15	60612642	60612661	(41378528)	+	(TC)n	Simple_repeat	1	30	(38)	1324065
22	0.0	0.0	0.0	chr15	60612662	60612685	(41378504)	+	(T)n	Simple_repeat	1	24	(0)	1324066
20	32.9	1.5	0.0	chr15	60612686	60612708	(41378481)	+	(TC)n	Simple_repeat	31	68	(0)	1324065
20	14.0	0.0	0.0	chr15	60617628	60617659	(41373530)	+	(AC)n	Simple_repeat	1	32	(0)	1324072
49	4.1	0.0	0.0	chr15	60617660	60617710	(41373479)	+	(AG)n	Simple_repeat	1	51	(0)	1324073
546	29.3	9.0	0.7	chr15	60733529	60733813	(41257376)	+	MamRep605	LTR?	1	311	(538)	1324240
50	2.2	0.0	0.0	chr15	60733915	60733961	(41257228)	+	(AG)n	Simple_repeat	1	47	(0)	1324241
13	11.3	7.1	4.4	chr15	60733965	60734006	(41257183)	+	(GAATGA)n	Simple_repeat	1	45	(0)	1324242
517	23.7	7.3	7.3	chr15	60734043	60734181	(41257008)	+	MamRep137	DNA/TcMar-Tigger	143	290	(220)	1324243
53	2.0	0.0	0.0	chr15	60826741	60826790	(41164399)	+	(CT)n	Simple_repeat	1	50	(0)	1324386
1096	30.3	9.0	3.0	chr15	61293279	61293943	(40697246)	+	L1MEd	LINE/L1	595	1296	(5790)	1325103
39	2.7	0.0	0.0	chr15	61293944	61293981	(40697208)	+	(GA)n	Simple_repeat	1	38	(0)	1325104
1096	30.3	9.0	3.0	chr15	61293982	61294365	(40696824)	+	L1MEd	LINE/L1	1297	1713	(5373)	1325103
1559	11.2	12.8	0.4	chr15	61788090	61788321	(40202868)	+	AluSq	SINE/Alu	1	265	(48)	1325910
975	19.9	4.2	11.7	chr15	61788322	61788340	(40202849)	C	Charlie4a	DNA/hAT-Charlie	(402)	106	103	1325899
42	4.7	0.0	0.0	chr15	61788341	61788385	(40202804)	+	(AG)n	Simple_repeat	1	45	(0)	1325911
975	19.9	4.2	11.7	chr15	61788386	61788495	(40202694)	C	Charlie4a	DNA/hAT-Charlie	(406)	102	7	1325899
4526	12.3	2.8	3.2	chr15	62593968	62594198	(39396991)	+	L1MA8	LINE/L1	4622	4852	(1291)	1327153
1851	16.8	0.7	0.0	chr15	62594199	62594502	(39396687)	C	AluJr	SINE/Alu	(2)	310	5	1327154
305	20.3	3.0	1.5	chr15	63407629	63407693	(38583496)	+	MIRc	SINE/MIR	83	148	(120)	1328487
44	17.9	3.9	1.9	chr15	63493330	63493438	(38497751)	+	GA-rich	Low_complexity	1	111	(0)	1328693
17	16.3	6.2	0.0	chr15	63504421	63504468	(38486721)	+	G-rich	Low_complexity	1	51	(0)	1328722
122	11.7	0.0	0.0	chr15	63547723	63547908	(38443281)	+	(AGAG)n	Simple_repeat	1	186	(0)	1328775
336	7.5	0.0	0.0	chr15	63547916	63547955	(38443234)	+	AluYh3	SINE/Alu	12	51	(260)	1328776
1096	15.1	1.1	3.8	chr15	63547962	63548147	(38443042)	+	AluSx3	SINE/Alu	131	311	(0)	1328777
32	3.2	0.0	0.0	chr15	63862707	63862738	(38128451)	+	(TC)n	Simple_repeat	1	32	(0)	1329277
1074	31.7	6.9	4.5	chr15	64229222	64229506	(37761683)	+	MLT1K	LTR/ERVL-MaLR	1	296	(299)	1329977
43	4.5	0.0	0.0	chr15	64229507	64229552	(37761637)	+	(TC)n	Simple_repeat	1	46	(0)	1329978
1074	31.7	6.9	4.5	chr15	64229553	64229844	(37761345)	+	MLT1K	LTR/ERVL-MaLR	297	592	(3)	1329977
18	4.5	0.0	0.0	chr15	64233345	64233367	(37757822)	+	(TC)n	Simple_repeat	1	23	(0)	1329986
16	17.0	3.4	4.9	chr15	64460651	64460687	(37530502)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1330440
29	8.1	0.0	0.0	chr15	65160585	65160623	(36830566)	+	(TC)n	Simple_repeat	1	39	(0)	1332022
41	0.0	0.0	0.0	chr15	65160624	65160658	(36830531)	+	(CA)n	Simple_repeat	1	35	(0)	1332023
342	32.8	10.1	0.0	chr15	65160756	65160889	(36830300)	+	MamRep137	DNA/TcMar-Tigger	75	223	(287)	1332024
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
13	26.2	3.7	5.9	chr15	65377693	65377700	(36613489)	+	(CGG)n	Simple_repeat	1	12	(73)	1332490
20	10.1	0.0	0.0	chr15	65377701	65377732	(36613457)	+	(GCA)n	Simple_repeat	1	32	(0)	1332491
13	26.2	3.7	5.9	chr15	65377733	65377774	(36613415)	+	(CGG)n	Simple_repeat	13	85	(0)	1332490
12	17.0	8.3	1.9	chr15	65423107	65423154	(36568035)	+	(CCCTGCG)n	Simple_repeat	1	52	(0)	1332587
276	26.7	13.0	7.4	chr15	65530012	65530187	(36461002)	+	L2b	LINE/L2	3183	3408	(18)	1332845
2029	21.8	6.6	2.7	chr15	65533131	65533682	(36457507)	C	MER90	LTR/ERV1	(0)	575	1	1332850
240	27.8	0.0	1.4	chr15	66150677	66150749	(35840440)	C	MIR3	SINE/MIR	(6)	202	131	1334068
366	20.6	0.0	1.4	chr15	66150751	66150823	(35840366)	+	AluJr4	SINE/Alu	209	280	(32)	1334069
55	0.0	0.0	0.0	chr15	66150824	66150870	(35840319)	+	(GA)n	Simple_repeat	1	47	(0)	1334070
12	26.1	0.0	4.1	chr15	66150982	66151030	(35840159)	+	G-rich	Low_complexity	1	49	(0)	1334071
655	26.7	16.6	4.8	chr15	66160089	66160242	(35830947)	+	MLT1L	LTR/ERVL-MaLR	122	309	(301)	1334083
43	0.0	0.0	0.0	chr15	66160243	66160279	(35830910)	+	(CT)n	Simple_repeat	1	37	(0)	1334084
655	26.7	16.6	4.8	chr15	66160280	66160537	(35830652)	+	MLT1L	LTR/ERVL-MaLR	310	592	(18)	1334083
25	24.4	0.9	6.4	chr15	66253680	66253702	(35737487)	+	(GCGGCGG)n	Simple_repeat	1	61	(49)	1334276
13	25.6	5.7	2.7	chr15	66253703	66253772	(35737417)	+	(GCGG)n	Simple_repeat	1	74	(0)	1334277
25	24.4	0.9	6.4	chr15	66253773	66253788	(35737401)	+	(GCGGCGG)n	Simple_repeat	62	110	(0)	1334276
23	21.7	3.5	4.4	chr15	66253803	66253904	(35737285)	+	(TCCC)n	Simple_repeat	1	100	(0)	1334278
1609	17.4	6.8	1.7	chr15	66265846	66266139	(35725050)	C	AluJr	SINE/Alu	(2)	310	1	1334310
15	12.7	0.0	5.3	chr15	66293695	66293732	(35697457)	+	(CCGCAGC)n	Simple_repeat	1	38	(0)	1334370
23	23.0	3.2	4.2	chr15	66293740	66293832	(35697357)	+	G-rich	Low_complexity	1	96	(0)	1334371
452	30.2	9.0	1.2	chr15	66368888	66369051	(35622138)	+	MIR3	SINE/MIR	21	198	(10)	1334549
12	12.2	3.7	0.0	chr15	66387261	66387287	(35603902)	+	(GCGCA)n	Simple_repeat	1	28	(0)	1334598
12	22.4	2.7	0.0	chr15	66701480	66701516	(35289673)	+	(CCGG)n	Simple_repeat	1	38	(0)	1335296
17	20.9	0.0	5.5	chr15	66702311	66702366	(35288823)	+	(GAGC)n	Simple_repeat	1	52	(0)	1335298
18	8.5	0.0	0.0	chr15	66707337	66707361	(35283828)	+	(AG)n	Simple_repeat	1	25	(0)	1335304
271	32.0	2.9	5.7	chr15	66759173	66759384	(35231805)	+	L1MC4	LINE/L1	2491	2696	(3518)	1335402
849	14.3	0.0	0.0	chr15	66759385	66759510	(35231679)	C	L1PB3	LINE/L1	(0)	6154	6029	1335405
43	4.5	0.0	0.0	chr15	66987848	66987893	(35003296)	+	(TC)n	Simple_repeat	1	46	(0)	1335835
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
29	16.2	1.3	5.2	chr15	67542696	67542771	(34448418)	+	(CGC)n	Simple_repeat	1	77	(0)	1336780
24	23.8	4.3	3.1	chr15	67590357	67590449	(34400740)	+	(TCCT)n	Simple_repeat	1	97	(0)	1336862
44	11.3	0.0	0.0	chr15	67590407	67590475	(34400714)	+	(CTCT)n	Simple_repeat	1	69	(0)	1336863
1483	17.3	7.8	2.2	chr15	67590476	67590753	(34400436)	C	AluJb	SINE/Alu	(17)	295	1	1336864
968	20.0	1.1	0.5	chr15	67724385	67724569	(34266620)	C	AluJb	SINE/Alu	(1)	311	126	1337066
989	14.6	0.0	3.2	chr15	67818902	67819059	(34172130)	C	AluJo	SINE/Alu	(20)	292	140	1337178
53	2.0	0.0	0.0	chr15	67819067	67819116	(34172073)	+	(CT)n	Simple_repeat	1	50	(0)	1337179
16	19.2	0.0	9.4	chr15	67823594	67823657	(34167532)	+	(CCG)n	Simple_repeat	1	64	(0)	1337184
457	21.6	10.8	1.3	chr15	67930295	67930444	(34060745)	+	LTR104_Mam	LTR/Gypsy	631	796	(713)	1337406
33	0.0	0.0	0.0	chr15	67930457	67930484	(34060705)	+	(TC)n	Simple_repeat	1	28	(0)	1337407
394	37.4	7.8	3.3	chr15	67930490	67931125	(34060064)	+	LTR104_Mam	LTR/Gypsy	833	1499	(10)	1337406
67	20.7	4.3	2.0	chr15	68034786	68034973	(33956216)	+	(TTTC)n	Simple_repeat	1	196	(0)	1337624
88	7.4	0.0	0.8	chr15	68034974	68035091	(33956098)	+	(TCTT)n	Simple_repeat	1	118	(0)	1337625
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
1005	25.1	8.2	16.5	chr15	68285839	68286367	(33704822)	C	L1ME3	LINE/L1	(949)	5197	4652	1338069
562	23.9	0.0	0.0	chr15	68286368	68286476	(33704713)	C	AluJb	SINE/Alu	(3)	309	201	1338072
1005	25.1	8.2	16.5	chr15	68286477	68286745	(33704444)	C	L1ME3	LINE/L1	(949)	4651	4373	1338069
2333	8.7	0.0	1.3	chr15	68305905	68306203	(33684986)	+	AluY	SINE/Alu	1	295	(16)	1338103
15	0.0	0.0	0.0	chr15	68306310	68306326	(33684863)	+	(TC)n	Simple_repeat	1	17	(0)	1338104
829	21.1	11.4	2.5	chr15	68342702	68342900	(33648289)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1338163
441	25.4	20.2	1.9	chr15	68342901	68342997	(33648192)	+	MIRb	SINE/MIR	11	121	(147)	1338164
50	0.0	0.0	0.0	chr15	68342998	68343040	(33648149)	+	(TC)n	Simple_repeat	1	43	(0)	1338165
441	25.4	20.2	1.9	chr15	68343041	68343147	(33648042)	+	MIRb	SINE/MIR	122	262	(6)	1338164
18	3.8	0.0	3.5	chr15	68578895	68578923	(33412266)	+	(TCC)n	Simple_repeat	1	29	(0)	1338603
2372	10.9	0.0	0.0	chr15	68604834	68605135	(33386054)	+	AluSg	SINE/Alu	1	302	(8)	1338656
1581	26.6	2.8	1.6	chr15	68605239	68605666	(33385523)	+	L1ME4c	LINE/L1	296	728	(102)	1338657
381	27.9	4.3	9.9	chr15	68620603	68620825	(33370364)	C	MIRc	SINE/MIR	(14)	254	45	1338689
2413	8.8	0.0	1.3	chr15	68648365	68648671	(33342518)	+	AluY	SINE/Alu	1	303	(8)	1338756
560	26.4	10.2	0.0	chr15	68648736	68648947	(33342242)	+	L1ME4a	LINE/L1	5449	5684	(440)	1338752
13	24.2	1.9	3.8	chr15	68700832	68700883	(33290306)	+	G-rich	Low_complexity	1	53	(0)	1338871
13	19.4	0.0	2.7	chr15	68818818	68818854	(33172335)	+	(CCCCCA)n	Simple_repeat	1	37	(0)	1339118
17	14.7	5.2	4.9	chr15	68820186	68820243	(33170946)	+	GA-rich	Low_complexity	1	61	(0)	1339121
3327	13.9	4.1	11.8	chr15	68991613	68992346	(32998843)	C	LTR76	LTR/ERV1	(0)	675	1	1339417
1179	12.6	8.5	11.4	chr15	69128521	69128656	(32862533)	+	AluJr	SINE/Alu	128	282	(30)	1339681
19	11.6	0.0	0.0	chr15	69128657	69128685	(32862504)	+	(TC)n	Simple_repeat	1	29	(0)	1339684
303	26.0	0.0	6.3	chr15	69143826	69143936	(32847253)	C	MIRb	SINE/MIR	(0)	268	165	1339719
2793	25.5	5.7	13.0	chr15	69181895	69182269	(32808920)	C	L2a	LINE/L2	(1746)	1673	1297	1339780
35	0.0	0.0	0.0	chr15	69182270	69182299	(32808890)	+	(TG)n	Simple_repeat	1	30	(0)	1339783
2793	25.5	5.7	13.0	chr15	69182300	69182731	(32808458)	C	L2a	LINE/L2	(2123)	1296	955	1339780
27	13.9	0.0	0.0	chr15	69824215	69824262	(32166927)	+	(GAGAGA)n	Simple_repeat	1	48	(0)	1340972
313	25.3	9.2	6.0	chr15	69826178	69826310	(32164879)	+	MIR1_Amn	SINE/MIR	8	137	(131)	1340977
47	2.1	2.1	0.0	chr15	70016136	70016183	(31975006)	+	(TC)n	Simple_repeat	1	49	(0)	1341333
30	27.6	0.0	0.0	chr15	70016199	70016276	(31974913)	+	(TC)n	Simple_repeat	1	78	(0)	1341333
12	12.6	2.5	7.3	chr15	70033611	70033650	(31957539)	+	(GCCCAG)n	Simple_repeat	1	41	(0)	1341367
12	21.7	0.0	0.0	chr15	70062369	70062400	(31928789)	+	(GCGG)n	Simple_repeat	1	32	(0)	1341412
20	0.0	0.0	0.0	chr15	70101681	70101702	(31889487)	+	(A)n	Simple_repeat	1	22	(0)	1341469
390	25.7	3.5	3.5	chr15	70161886	70162026	(31829163)	C	MIRb	SINE/MIR	(92)	176	36	1341592
49	20.9	0.0	0.0	chr15	70162065	70162163	(31829026)	+	GA-rich	Low_complexity	1	99	(0)	1341593
243	29.8	0.0	0.0	chr15	70197272	70197328	(31793861)	C	MIR1_Amn	SINE/MIR	(101)	129	73	1341680
385	30.0	10.7	8.3	chr15	70398074	70398545	(31592644)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	58	1342073
499	27.5	7.6	2.1	chr15	70494269	70494454	(31496735)	C	MIR	SINE/MIR	(10)	252	56	1342255
400	28.1	9.0	3.0	chr15	70557650	70557847	(31433342)	+	MLT1N2	LTR/ERVL-MaLR	277	487	(75)	1342366
146	26.8	1.2	1.2	chr15	70557897	70558323	(31432866)	+	GA-rich	Low_complexity	1	432	(0)	1342367
16	30.4	4.4	0.0	chr15	70752518	70752585	(31238604)	+	(TC)n	Simple_repeat	1	71	(0)	1342677
19	17.0	0.0	0.0	chr15	70853980	70854019	(31137170)	+	(CCTCGT)n	Simple_repeat	1	40	(0)	1342866
18	0.0	0.0	0.0	chr15	71350142	71350161	(30641028)	+	(A)n	Simple_repeat	1	20	(0)	1343598
1250	19.7	11.7	4.8	chr15	71363554	71363926	(30627263)	C	LTR37A	LTR/ERV1	(0)	426	25	1343621
1347	10.8	1.1	0.0	chr15	71459149	71459324	(30531865)	C	AluSc8	SINE/Alu	(0)	311	134	1343765
86	6.3	0.0	0.0	chr15	71459325	71459424	(30531765)	+	(TC)n	Simple_repeat	1	100	(0)	1343766
18	0.0	0.0	0.0	chr15	71532264	71532283	(30458906)	+	(GA)n	Simple_repeat	1	20	(0)	1343886
57	0.0	0.0	0.0	chr15	71532284	71532332	(30458857)	+	(GT)n	Simple_repeat	1	49	(0)	1343887
2113	12.8	0.4	2.5	chr15	71532333	71532614	(30458575)	C	AluSc	SINE/Alu	(33)	276	1	1343888
572	20.5	3.3	0.0	chr15	71708263	71708379	(30282810)	C	Zaphod3	DNA/hAT-Tip100	(2487)	136	16	1344208
3963	24.7	9.9	7.5	chr15	71980877	71981627	(30009562)	C	L1ME3A	LINE/L1	(2054)	4265	3428	1344667
37	4.7	2.3	0.0	chr15	71981628	71981671	(30009518)	+	(CT)n	Simple_repeat	1	45	(0)	1344672
3963	24.7	9.9	7.5	chr15	71981672	71982005	(30009184)	C	L1ME3A	LINE/L1	(2892)	3427	3051	1344667
18	28.7	0.0	2.8	chr15	72230283	72230354	(29760835)	+	(CCCGCCG)n	Simple_repeat	1	69	(0)	1345107
25	27.0	1.0	4.0	chr15	72474642	72474752	(29516437)	+	(GGACGA)n	Simple_repeat	1	107	(0)	1345548
13	17.3	3.3	7.9	chr15	72474796	72474856	(29516333)	+	(GGCGGC)n	Simple_repeat	1	63	(0)	1345549
27	3.5	0.0	0.0	chr15	72474867	72474896	(29516293)	+	(CGG)n	Simple_repeat	1	30	(0)	1345550
263	13.2	0.0	0.0	chr15	72796725	72796762	(29194427)	+	MIRc	SINE/MIR	114	151	(117)	1346106
1270	18.6	0.5	0.0	chr15	72820847	72821056	(29170133)	C	LTR85c	LTR/Gypsy?	(582)	241	31	1346151
19	0.0	0.0	0.0	chr15	72821101	72821121	(29170068)	+	(CA)n	Simple_repeat	1	21	(0)	1346152
58	1.9	0.0	0.0	chr15	72821135	72821188	(29170001)	+	(GA)n	Simple_repeat	1	54	(0)	1346153
507	33.2	9.4	4.5	chr15	73048545	73049030	(28942159)	+	L2b	LINE/L2	2323	2834	(585)	1346512
12	16.5	5.9	0.0	chr15	73052443	73052476	(28938713)	+	(CTCCC)n	Simple_repeat	1	36	(0)	1346527
19	17.9	1.9	3.6	chr15	73052520	73052573	(28938616)	+	G-rich	Low_complexity	1	55	(0)	1346528
13	10.5	6.5	0.0	chr15	73052629	73052659	(28938530)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	1346529
21	15.4	4.8	6.9	chr15	73052747	73052829	(28938360)	+	G-rich	Low_complexity	1	87	(0)	1346530
5342	15.2	5.3	4.7	chr15	73310255	73310729	(28680460)	C	L1M4	LINE/L1	(2402)	4242	3749	1346920
33	0.0	3.1	0.0	chr15	73310730	73310761	(28680428)	+	(TC)n	Simple_repeat	1	33	(0)	1346921
5342	15.2	5.3	4.7	chr15	73310762	73311097	(28680092)	C	L1M4	LINE/L1	(2896)	3748	3429	1346920
12	26.9	0.0	4.1	chr15	73684332	73684380	(28306809)	+	(CCGGC)n	Simple_repeat	1	49	(0)	1347538
21	15.2	3.8	1.8	chr15	73684449	73684501	(28306688)	+	(CGGCG)n	Simple_repeat	1	55	(0)	1347539
16	19.4	1.7	6.6	chr15	73924656	73924716	(28066473)	+	(TCCC)n	Simple_repeat	1	58	(0)	1347950
15	14.4	5.0	2.4	chr15	73927563	73927602	(28063587)	+	(GCC)n	Simple_repeat	1	42	(0)	1347952
1628	26.3	9.9	8.5	chr15	74153179	74153413	(27837776)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	944	1348347
2471	18.9	13.1	3.9	chr15	74153414	74153469	(27837720)	C	MLT2F	LTR/ERVL	(0)	663	615	1348348
43	2.5	0.0	0.0	chr15	74153470	74153510	(27837679)	+	(TC)n	Simple_repeat	1	41	(0)	1348349
55	21.0	3.0	0.7	chr15	74301800	74301930	(27689259)	+	(TC)n	Simple_repeat	1	135	(0)	1348612
323	19.4	0.0	0.0	chr15	74527101	74527167	(27464022)	C	L1ME4b	LINE/L1	(361)	531	465	1349023
23	20.3	0.0	0.0	chr15	74527183	74527230	(27463959)	+	(TCTC)n	Simple_repeat	1	48	(0)	1349024
2183	10.7	1.0	0.0	chr15	74527232	74527520	(27463669)	C	AluSx4	SINE/Alu	(18)	292	1	1349025
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
1025	15.7	7.8	7.1	chr15	75239728	75239980	(26751209)	+	MER57E1	LTR/ERV1	113	367	(5)	1350430
78	15.8	0.0	0.0	chr15	75239981	75240113	(26751076)	+	(CTCT)n	Simple_repeat	1	133	(0)	1350432
2211	13.7	0.3	0.3	chr15	75240114	75240426	(26750763)	C	AluSq2	SINE/Alu	(0)	313	1	1350433
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
29	0.0	0.0	0.0	chr15	75731882	75731906	(26259283)	+	(CT)n	Simple_repeat	1	25	(0)	1351422
1235	19.6	11.3	0.4	chr15	76322843	76323119	(25668070)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	236	1352389
24	13.3	0.0	0.0	chr15	76323176	76323217	(25667972)	+	(TCTC)n	Simple_repeat	1	42	(0)	1352390
1785	8.0	14.4	0.0	chr15	76323218	76323467	(25667722)	C	AluY	SINE/Alu	(19)	292	1	1352391
17	4.1	3.7	3.6	chr15	77034028	77034054	(24957135)	+	(AG)n	Simple_repeat	1	28	(0)	1353444
14	4.0	7.7	0.0	chr15	77420098	77420123	(24571066)	+	(ACTA)n	Simple_repeat	1	28	(0)	1354018
30	26.2	1.9	1.9	chr15	77420146	77420248	(24570941)	+	(CGCC)n	Simple_repeat	1	105	(0)	1354019
33	0.0	0.0	0.0	chr15	77497656	77497683	(24493506)	+	(AG)n	Simple_repeat	1	28	(0)	1354143
24	0.0	0.0	0.0	chr15	77497684	77497710	(24493479)	+	(TG)n	Simple_repeat	1	27	(0)	1354144
53	0.0	0.0	0.0	chr15	77871688	77871732	(24119457)	+	(AG)n	Simple_repeat	1	45	(0)	1354825
13	27.1	3.4	1.6	chr15	77871761	77871819	(24119370)	+	G-rich	Low_complexity	1	61	(0)	1354826
31	5.9	0.0	0.0	chr15	78136293	78136328	(23854861)	+	(TC)n	Simple_repeat	1	36	(0)	1355280
284	28.4	0.0	0.0	chr15	78136388	78136454	(23854735)	+	L2c	LINE/L2	3321	3387	(0)	1355281
16	22.3	2.0	2.0	chr15	78149437	78149485	(23841704)	+	(GCAG)n	Simple_repeat	1	50	(0)	1355315
454	22.9	1.6	0.8	chr15	78184867	78184989	(23806200)	+	L1MEf	LINE/L1	121	244	(6156)	1355381
42	17.7	1.3	0.0	chr15	78184994	78185071	(23806118)	+	GA-rich	Low_complexity	1	79	(0)	1355382
734	29.6	11.0	2.3	chr15	78185072	78185468	(23805721)	+	L1MEf	LINE/L1	252	687	(5713)	1355381
44	2.4	0.0	0.0	chr15	78249217	78249258	(23741931)	+	(AG)n	Simple_repeat	1	42	(0)	1355505
991	22.1	28.9	1.8	chr15	78455789	78456214	(23534975)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	1355941
12	20.2	3.5	6.7	chr15	78811266	78811323	(23179866)	+	(GTCCG)n	Simple_repeat	1	60	(0)	1356625
52	21.3	5.0	0.7	chr15	79163490	79163599	(22827590)	+	(TC)n	Simple_repeat	1	116	(0)	1357361
87	3.8	0.9	3.4	chr15	79163600	79163715	(22827474)	+	(TCCT)n	Simple_repeat	1	117	(0)	1357362
52	21.3	5.0	0.7	chr15	79163716	79163744	(22827445)	+	(TC)n	Simple_repeat	1	29	(0)	1357363
41	4.8	0.0	0.0	chr15	79507038	79507081	(22484108)	+	(GA)n	Simple_repeat	1	44	(0)	1357957
1519	18.0	7.5	3.5	chr15	79507082	79507220	(22483969)	C	MLT1B	LTR/ERVL-MaLR	(207)	183	31	1357956
312	18.2	13.5	1.3	chr15	80033463	80033540	(21957649)	C	MER81	DNA/hAT-Blackjack	(24)	90	2	1358833
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
1507	14.8	2.4	5.7	chr15	80094229	80094528	(21896661)	+	MER1B	DNA/hAT-Charlie	26	315	(24)	1358971
15	4.0	3.6	3.5	chr15	80148733	80148760	(21842429)	+	(AAC)n	Simple_repeat	1	29	(0)	1359064
48	0.0	0.0	0.0	chr15	80148847	80148887	(21842302)	+	(GT)n	Simple_repeat	1	41	(0)	1359065
33	11.0	0.0	0.0	chr15	80148890	80148938	(21842251)	+	(AG)n	Simple_repeat	1	49	(0)	1359066
865	24.9	12.2	4.2	chr15	80288157	80288306	(21702883)	+	MLT1H2	LTR/ERVL-MaLR	128	294	(255)	1359307
42	4.6	0.0	0.0	chr15	80288307	80288351	(21702838)	+	(GA)n	Simple_repeat	1	45	(0)	1359308
865	24.2	7.4	4.7	chr15	80288352	80288568	(21702621)	+	MLT1H2	LTR/ERVL-MaLR	262	484	(5)	1359307
33	3.1	0.0	0.0	chr15	80405891	80405923	(21585266)	+	(AG)n	Simple_repeat	1	33	(0)	1359480
30	15.9	0.0	0.0	chr15	81231250	81231305	(20759884)	+	GA-rich	Low_complexity	1	56	(0)	1360949
71	1.6	0.0	0.0	chr15	81231325	81231389	(20759800)	+	(TC)n	Simple_repeat	1	65	(0)	1360950
1918	18.0	0.3	0.3	chr15	81231390	81231672	(20759517)	C	AluJb	SINE/Alu	(29)	283	1	1360951
2002	14.4	0.7	0.0	chr15	81258426	81258696	(20732493)	+	AluJb	SINE/Alu	8	280	(32)	1360984
36	7.2	0.0	0.0	chr15	81258731	81258774	(20732415)	+	(CT)n	Simple_repeat	1	44	(0)	1360985
1664	18.3	4.1	6.3	chr15	81418747	81418938	(20572251)	+	MLT1B	LTR/ERVL-MaLR	1	187	(203)	1361254
30	3.5	0.0	0.0	chr15	81418939	81418968	(20572221)	+	(TC)n	Simple_repeat	1	30	(0)	1361255
1664	18.3	4.1	6.3	chr15	81418969	81419172	(20572017)	+	MLT1B	LTR/ERVL-MaLR	188	388	(2)	1361254
2492	5.7	0.0	1.7	chr15	81564966	81565251	(20425938)	C	AluY	SINE/Alu	(30)	281	1	1361478
2245	28.7	13.2	2.1	chr15	81565252	81565291	(20425898)	+	L2a	LINE/L2	2917	2949	(470)	1361477
106	6.1	1.4	1.4	chr15	81565292	81565433	(20425756)	+	(TC)n	Simple_repeat	1	144	(0)	1361480
2245	27.1	17.8	0.6	chr15	81565434	81565780	(20425409)	+	L2a	LINE/L2	2950	3374	(52)	1361477
84	20.4	2.4	2.3	chr15	81608530	81608741	(20382448)	+	(TTTC)n	Simple_repeat	1	217	(0)	1361534
231	31.3	30.0	2.6	chr15	81608817	81609019	(20382170)	C	L2c	LINE/L2	(1544)	1875	1617	1361528
70	0.0	0.0	0.0	chr15	81683455	81683514	(20307675)	+	(TC)n	Simple_repeat	1	60	(0)	1361656
15	0.0	0.0	0.0	chr15	81683525	81683541	(20307648)	+	(CA)n	Simple_repeat	1	17	(0)	1361657
1831	21.4	2.9	5.2	chr15	81829919	81830292	(20160897)	+	MLT2D	LTR/ERVL	1	357	(57)	1361871
31	2.7	5.3	0.0	chr15	81830293	81830330	(20160859)	+	(TC)n	Simple_repeat	1	40	(0)	1361872
1831	21.4	2.9	5.2	chr15	81830331	81830343	(20160846)	+	MLT2D	LTR/ERVL	358	371	(43)	1361871
31	0.0	0.0	0.0	chr15	81830344	81830370	(20160819)	+	(AC)n	Simple_repeat	1	27	(0)	1361873
1831	21.4	2.9	5.2	chr15	81830371	81830405	(20160784)	+	MLT2D	LTR/ERVL	372	412	(2)	1361871
513	34.5	6.9	2.9	chr15	81830406	81831238	(20159951)	C	L1M6	LINE/L1	(1188)	5212	4340	1361870
339	25.5	10.5	2.7	chr15	81950771	81950919	(20040270)	+	Charlie18a	DNA/hAT-Charlie	68	229	(113)	1362087
494	31.7	11.2	0.5	chr15	81950920	81951103	(20040086)	+	MIRb	SINE/MIR	42	247	(21)	1362088
727	28.7	10.9	2.2	chr15	81966578	81966894	(20024295)	+	L1M7	LINE/L1	1420	1767	(4451)	1362108
1488	21.1	1.0	4.5	chr15	81966909	81967221	(20023968)	+	AluJr	SINE/Alu	7	308	(4)	1362113
19	23.5	1.4	4.2	chr15	82046309	82046378	(19944811)	+	(CCGCCCC)n	Simple_repeat	1	71	(0)	1362236
12	4.2	0.0	10.0	chr15	82047140	82047169	(19944020)	+	(CGCCC)n	Simple_repeat	1	30	(0)	1362238
1384	15.0	5.8	1.9	chr15	82164996	82165208	(19825981)	+	AluJr	SINE/Alu	1	222	(90)	1362472
15	13.6	0.0	2.9	chr15	82165233	82165266	(19825923)	+	A-rich	Low_complexity	1	34	(0)	1362473
27	13.1	0.0	0.0	chr15	82165257	82165298	(19825891)	+	(GA)n	Simple_repeat	1	42	(0)	1362474
17	17.6	1.7	6.7	chr15	82709459	82709517	(19281672)	+	G-rich	Low_complexity	1	60	(0)	1363302
2151	11.9	0.0	0.0	chr15	82860655	82860939	(19130250)	+	AluSx1	SINE/Alu	1	285	(27)	1363580
37	13.3	1.2	3.6	chr15	82860943	82860956	(19130233)	+	A-rich	Low_complexity	1	13	(0)	1363581
30	0.0	0.0	0.0	chr15	82860957	82860982	(19130207)	+	(GA)n	Simple_repeat	1	26	(0)	1363582
2257	12.9	0.0	1.6	chr15	84557742	84558046	(17433143)	+	AluSq2	SINE/Alu	1	300	(13)	1366158
31	3.3	0.0	0.0	chr15	84558047	84558077	(17433112)	+	(AG)n	Simple_repeat	1	31	(0)	1366159
2257	12.9	0.0	1.6	chr15	84558078	84558090	(17433099)	+	AluSq2	SINE/Alu	301	313	(0)	1366158
15	5.5	0.0	0.0	chr15	84754058	84754076	(17237113)	+	(TG)n	Simple_repeat	1	19	(0)	1366598
184	32.5	2.8	2.7	chr15	84754190	84754272	(17236917)	+	MIRc	SINE/MIR	76	159	(71)	1366599
48	0.0	0.0	0.0	chr15	84847209	84847249	(17143940)	+	(GA)n	Simple_repeat	1	41	(0)	1366753
4885	21.0	2.7	4.3	chr15	84847250	84847776	(17143413)	+	L1MEf	LINE/L1	1468	1998	(4642)	1366749
371	36.0	10.0	2.5	chr15	85402659	85402897	(16588292)	C	MIRb	SINE/MIR	(8)	260	2	1367769
56	22.9	0.0	0.8	chr15	85504849	85504973	(16486216)	+	(CT)n	Simple_repeat	1	125	(0)	1367909
662	20.7	0.1	0.1	chr15	85896232	85897561	(16093628)	+	(TC)n	Simple_repeat	1	1330	(0)	1368579
505	12.9	0.0	0.0	chr15	85897566	85897635	(16093554)	C	FRAM	SINE/Alu	(36)	140	71	1368580
579	26.4	2.2	1.8	chr15	86494835	86495058	(15496131)	C	L1ME3Cz	LINE/L1	(9)	988	764	1369487
35	16.7	0.0	0.0	chr15	86495091	86495157	(15496032)	+	(TCTCTC)n	Simple_repeat	1	67	(0)	1369488
918	20.4	10.6	3.5	chr15	88487847	88488248	(13502941)	C	MSTD	LTR/ERVL-MaLR	(0)	465	1	1372485
439	28.8	7.3	0.0	chr15	88603878	88604016	(13387173)	C	MER102b	DNA/hAT-Charlie	(190)	151	2	1372671
330	12.0	0.0	0.0	chr15	88939316	88939365	(13051824)	+	MER4-int	LTR/ERV1	637	686	(5912)	1373281
427	24.2	1.0	2.1	chr15	88939334	88939430	(13051759)	+	MER4-int	LTR/ERV1	933	1028	(7242)	1373281
37	27.0	0.9	1.8	chr15	88939431	88939541	(13051648)	+	A-rich	Low_complexity	1	112	(0)	1373285
294	17.6	0.0	1.9	chr15	88939550	88939601	(13051588)	+	LTR49	LTR/ERV1	263	313	(282)	1373286
1267	17.8	7.3	4.8	chr15	88939602	88940145	(13051044)	+	HERV35I-int	LTR/ERV1	2340	2757	(4161)	1373287
64	0.0	1.7	0.0	chr15	89205129	89205186	(12786003)	+	(TC)n	Simple_repeat	1	59	(0)	1373819
1510	16.7	5.0	5.7	chr15	89205187	89205468	(12785721)	C	AluJr	SINE/Alu	(32)	280	1	1373820
194	6.2	0.8	0.0	chr15	89325038	89325274	(12665915)	+	(GAGT)n	Simple_repeat	1	239	(0)	1374023
21	3.9	0.0	0.0	chr15	89325275	89325298	(12665891)	+	(AG)n	Simple_repeat	2	25	(0)	1374024
12	13.7	6.2	0.0	chr15	89334445	89334476	(12656713)	+	(ACCCAC)n	Simple_repeat	1	34	(0)	1374039
59	1.9	0.0	0.0	chr15	89412826	89412880	(12578309)	+	(AG)n	Simple_repeat	1	55	(0)	1374155
86	28.4	3.6	2.4	chr15	89450710	89450779	(12540410)	+	GA-rich	Low_complexity	1	69	(0)	1374232
47	4.2	0.0	0.0	chr15	89450780	89450828	(12540361)	+	(AG)n	Simple_repeat	1	49	(0)	1374233
86	28.4	3.6	2.4	chr15	89450829	89451122	(12540067)	+	GA-rich	Low_complexity	70	368	(0)	1374234
406	22.4	7.9	0.0	chr15	89475874	89475989	(12515200)	C	MER5A	DNA/hAT-Charlie	(0)	189	64	1374274
34	2.5	2.4	2.3	chr15	89475990	89476031	(12515158)	+	(TC)n	Simple_repeat	1	43	(0)	1374275
57	1.9	0.0	0.0	chr15	89486548	89486600	(12504589)	+	(GA)n	Simple_repeat	1	53	(0)	1374299
41	4.0	0.0	0.0	chr15	89486601	89486649	(12504540)	+	(GT)n	Simple_repeat	1	49	(0)	1374300
2332	10.8	0.3	1.3	chr15	89858157	89858470	(12132719)	+	AluSp	SINE/Alu	2	312	(1)	1375022
61	7.3	0.0	2.2	chr15	89858471	89858562	(12132627)	+	(GAAA)n	Simple_repeat	1	92	(0)	1375023
30	17.3	4.6	0.0	chr15	90001395	90001459	(11989730)	+	GA-rich	Low_complexity	1	68	(0)	1375387
19	20.4	3.5	1.7	chr15	90001459	90001516	(11989673)	+	(GCGG)n	Simple_repeat	1	60	(0)	1375388
27	16.9	1.2	7.1	chr15	90001460	90001478	(11989711)	+	G-rich	Low_complexity	1	85	(0)	1375389
19	21.7	4.6	8.0	chr15	90001553	90001632	(11989557)	+	(CCCGG)n	Simple_repeat	1	113	(24)	1375390
34	25.9	3.0	2.9	chr15	90001826	90001957	(11989232)	+	GA-rich	Low_complexity	1	136	(0)	1375392
36	0.0	0.0	0.0	chr15	90001967	90001997	(11989192)	+	(GA)n	Simple_repeat	1	31	(0)	1375393
23	21.8	0.0	0.0	chr15	90002020	90002072	(11989117)	+	(GCG)n	Simple_repeat	1	53	(0)	1375394
282	36.8	0.0	0.8	chr15	90268645	90268762	(11722427)	+	L2	LINE/L2	1960	2076	(1343)	1376009
958	15.3	5.2	2.7	chr15	90661411	90661509	(11329680)	+	MER44A	DNA/TcMar-Tigger	2	101	(238)	1376803
32	3.2	0.0	0.0	chr15	90661510	90661541	(11329648)	+	(GA)n	Simple_repeat	1	32	(0)	1376804
958	15.3	5.2	2.7	chr15	90661542	90661602	(11329587)	+	MER44A	DNA/TcMar-Tigger	102	168	(171)	1376803
475	30.1	7.7	13.2	chr15	90706458	90706897	(11284292)	+	MamGypLTR1d	LTR/Gypsy	279	676	(137)	1376919
785	14.2	4.0	0.0	chr15	90706898	90707017	(11284172)	+	AluJr	SINE/Alu	1	125	(187)	1376920
475	30.1	7.7	13.2	chr15	90707023	90707136	(11284053)	+	MamGypLTR1d	LTR/Gypsy	677	800	(13)	1376919
1829	16.2	0.0	1.4	chr15	90707305	90707594	(11283595)	+	AluJr4	SINE/Alu	2	287	(25)	1376921
485	30.9	9.3	8.0	chr15	90708334	90708928	(11282261)	C	L1MEc	LINE/L1	(5484)	968	107	1376916
275	25.6	11.3	4.6	chr15	90934750	90934880	(11056309)	+	Charlie4z	DNA/hAT-Charlie	7	147	(20)	1377371
183	24.9	2.5	0.8	chr15	91304213	91304692	(10686497)	+	GA-rich	Low_complexity	1	492	(0)	1378069
1584	20.9	14.4	0.8	chr15	91682850	91683249	(10307940)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	1	1378676
64	15.5	1.7	0.0	chr15	91683277	91683391	(10307798)	+	GA-rich	Low_complexity	1	117	(0)	1378677
587	32.5	8.1	6.2	chr15	92817592	92817978	(9173211)	+	L2c	LINE/L2	2993	3387	(0)	1380529
31	8.1	0.0	0.0	chr15	92833993	92834032	(9157157)	+	(TC)n	Simple_repeat	1	40	(0)	1380561
888	20.8	15.1	0.8	chr15	92834052	92834289	(9156900)	+	MLT1G3	LTR/ERVL-MaLR	218	495	(100)	1380562
2316	16.3	5.4	1.0	chr15	92866695	92867103	(9124086)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1380656
38	0.0	0.0	0.0	chr15	92867116	92867148	(9124041)	+	(TC)n	Simple_repeat	1	33	(0)	1380657
18	4.7	0.0	0.0	chr15	92900204	92900225	(9090964)	+	(TC)n	Simple_repeat	1	22	(0)	1380713
20	4.2	0.0	0.0	chr15	92906244	92906268	(9084921)	+	(TC)n	Simple_repeat	1	25	(0)	1380714
1680	21.4	7.7	10.2	chr15	93467303	93467720	(8523469)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	177	1381694
59	0.0	0.0	0.0	chr15	93467721	93467770	(8523419)	+	(GA)n	Simple_repeat	1	50	(0)	1381695
1680	21.4	7.7	10.2	chr15	93467771	93467912	(8523277)	C	MLT1F1	LTR/ERVL-MaLR	(393)	176	20	1381694
1935	28.0	10.1	6.0	chr15	94425972	94426120	(7565069)	C	L1ME3D	LINE/L1	(4765)	1477	1332	1383028
51	3.9	0.0	0.0	chr15	94426121	94426173	(7565016)	+	(AG)n	Simple_repeat	1	53	(0)	1383031
1935	28.0	10.1	6.0	chr15	94426174	94427172	(7564017)	C	L1ME3D	LINE/L1	(4911)	1331	278	1383028
1867	14.5	15.3	1.9	chr15	95750445	95750615	(6240574)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	207	1384886
41	4.8	0.0	0.0	chr15	95750616	95750659	(6240530)	+	(GA)n	Simple_repeat	1	44	(0)	1384887
1867	14.5	15.3	1.9	chr15	95750660	95750860	(6240329)	C	MSTB1	LTR/ERVL-MaLR	(226)	206	2	1384886
808	14.6	11.8	3.0	chr15	95905868	95905892	(6085297)	+	MSTB	LTR/ERVL-MaLR	186	231	(195)	1385098
57	0.0	1.8	1.7	chr15	95905893	95905949	(6085240)	+	(CT)n	Simple_repeat	1	58	(0)	1385099
808	14.6	11.8	3.0	chr15	95905950	95906092	(6085097)	+	MSTB	LTR/ERVL-MaLR	232	371	(55)	1385098
17	4.9	0.0	0.0	chr15	96265325	96265345	(5725844)	+	(TC)n	Simple_repeat	1	21	(0)	1385637
17	9.0	2.4	7.0	chr15	96268729	96268770	(5722419)	+	(TCT)n	Simple_repeat	1	43	(0)	1385639
41	6.4	0.0	0.0	chr15	96284992	96285040	(5706149)	+	(TC)n	Simple_repeat	1	49	(0)	1385669
40	8.1	1.5	1.5	chr15	96331535	96331601	(5659588)	+	(CTC)n	Simple_repeat	1	68	(0)	1385729
21	21.1	0.0	0.0	chr15	96331631	96331679	(5659510)	+	GA-rich	Low_complexity	1	49	(0)	1385730
19	15.5	1.4	9.7	chr15	96331743	96331813	(5659376)	+	(CTCCC)n	Simple_repeat	1	72	(0)	1385731
17	19.2	2.8	0.0	chr15	96333472	96333507	(5657682)	+	(CT)n	Simple_repeat	1	37	(0)	1385736
21	29.4	2.8	0.0	chr15	96355073	96355143	(5636046)	+	(TC)n	Simple_repeat	1	73	(0)	1385751
27	16.0	8.2	1.3	chr15	96355347	96355419	(5635770)	+	GA-rich	Low_complexity	1	79	(0)	1385752
29	25.4	0.0	4.1	chr15	96357557	96357653	(5633536)	+	(TTTCC)n	Simple_repeat	1	97	(0)	1385754
40	0.0	0.0	0.0	chr15	96357693	96357726	(5633463)	+	(TG)n	Simple_repeat	1	34	(0)	1385755
36	14.7	0.0	0.0	chr15	96357727	96357786	(5633403)	+	(AG)n	Simple_repeat	1	60	(0)	1385756
24	17.2	2.2	0.0	chr15	96364072	96364117	(5627072)	+	(TC)n	Simple_repeat	1	47	(0)	1385758
37	0.0	2.5	2.4	chr15	96445345	96445384	(5545805)	+	(TC)n	Simple_repeat	1	41	(0)	1385884
24	17.3	0.0	0.0	chr15	96541194	96541240	(5449949)	+	(CTCT)n	Simple_repeat	1	47	(0)	1386020
1690	13.3	9.9	0.0	chr15	96541241	96541496	(5449693)	C	AluJo	SINE/Alu	(27)	285	2	1386021
13	22.5	0.0	0.0	chr15	97803404	97803439	(4187750)	+	(TCATCTA)n	Simple_repeat	1	36	(0)	1387679
56	0.0	0.0	0.0	chr15	97803487	97803534	(4187655)	+	(TC)n	Simple_repeat	1	48	(0)	1387680
944	10.2	3.8	0.0	chr15	98806879	98807006	(3184183)	+	AluSz	SINE/Alu	1	133	(179)	1389188
96	5.1	2.1	6.2	chr15	98845373	98845560	(3145629)	+	(CTC)n	Simple_repeat	1	192	(0)	1389236
27	9.0	10.3	3.5	chr15	98845561	98845604	(3145585)	+	(TC)n	Simple_repeat	2	48	(0)	1389237
15	16.8	0.0	2.8	chr15	99015203	99015238	(2975951)	+	(GCCTCG)n	Simple_repeat	1	36	(0)	1389443
35	6.8	0.0	0.0	chr15	99733363	99733408	(2257781)	+	(CCGCGAC)n	Simple_repeat	1	46	(0)	1390511
14	26.7	0.0	3.5	chr16	54067	54123	(90284222)	+	G-rich	Low_complexity	1	57	(0)	1394122
12	21.6	0.0	0.0	chr16	78382	78413	(90259932)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1394142
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
41	8.0	0.0	0.0	chr16	692888	692940	(89645405)	+	(TC)n	Simple_repeat	1	53	(0)	1395082
13	14.2	5.6	7.0	chr16	788596	788649	(89549696)	+	(GGC)n	Simple_repeat	1	57	(0)	1395212
57	0.0	0.0	0.0	chr16	981283	981303	(89357042)	+	(TG)n	Simple_repeat	1	21	(0)	1395376
53	0.0	0.0	0.0	chr16	981304	981348	(89356997)	+	(GA)n	Simple_repeat	1	45	(0)	1395377
57	0.0	0.0	0.0	chr16	981349	981391	(89356954)	+	(TG)n	Simple_repeat	2	44	(0)	1395378
13	24.4	2.2	8.6	chr16	1678512	1678602	(88659743)	+	(GCCGAG)n	Simple_repeat	1	93	(0)	1396237
12	9.5	2.4	9.5	chr16	1783148	1783188	(88555157)	+	(GGCCG)n	Simple_repeat	1	42	(0)	1396376
186	25.4	7.0	2.9	chr16	1960689	1960757	(88377588)	C	MIR3	SINE/MIR	(34)	174	103	1396718
274	34.4	8.6	0.8	chr16	1960842	1960970	(88377375)	+	MIRb	SINE/MIR	120	259	(9)	1396719
27	13.7	0.0	0.0	chr16	1964480	1964527	(88373818)	+	(CCCCGG)n	Simple_repeat	1	48	(0)	1396721
28	34.0	1.5	0.8	chr16	1983983	1984112	(88354233)	+	(CCGGCC)n	Simple_repeat	1	132	(0)	1396745
53	18.3	0.0	1.0	chr16	2038171	2038271	(88300074)	+	GA-rich	Low_complexity	1	101	(0)	1396821
13	19.5	0.0	2.7	chr16	2048028	2048064	(88290281)	+	(GCGCG)n	Simple_repeat	1	37	(0)	1396836
226	28.8	13.6	0.0	chr16	2205831	2205972	(88132373)	+	MIRc	SINE/MIR	11	185	(83)	1397038
675	25.5	5.2	4.1	chr16	2242489	2242754	(88095591)	+	MLT1C	LTR/ERVL-MaLR	1	269	(198)	1397092
394	26.2	2.8	0.0	chr16	2242815	2242917	(88095428)	+	MLT1C	LTR/ERVL-MaLR	269	374	(16)	1397092
17	15.3	2.7	0.0	chr16	2251462	2251498	(88086847)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	1397109
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
13	11.1	9.3	5.1	chr16	2752706	2752759	(87585586)	+	(GAGGC)n	Simple_repeat	1	59	(0)	1397879
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
18	3.8	3.7	0.0	chr16	3184218	3184244	(87154101)	+	(TGT)n	Simple_repeat	1	28	(0)	1398680
28	11.2	0.0	0.0	chr16	3188045	3188084	(87150261)	+	(A)n	Simple_repeat	1	40	(0)	1398692
635	0.0	0.0	0.0	chr16	3188094	3188167	(87150178)	+	tRNA-Pro-CCA	tRNA	1	74	(1)	1398693
676	21.6	2.0	1.6	chr16	3198172	3198385	(87139960)	C	MLT2B4	LTR/ERVL	(54)	502	237	1398715
18	19.7	2.7	6.7	chr16	3717380	3717452	(86620893)	+	(GCCC)n	Simple_repeat	1	75	(0)	1399696
12	22.3	0.0	7.4	chr16	3717424	3717477	(86620868)	+	(CCGGCG)n	Simple_repeat	1	54	(0)	1399697
1822	14.0	5.0	2.1	chr16	3797379	3797706	(86540639)	C	MER44A	DNA/TcMar-Tigger	(1)	338	1	1399823
2704	12.1	7.6	2.8	chr16	4244304	4244803	(86093542)	+	LTR9	LTR/ERV1	1	526	(86)	1400737
18	14.9	0.0	2.6	chr16	4315896	4315934	(86022411)	+	G-rich	Low_complexity	1	39	(0)	1400933
23	17.8	7.1	4.8	chr16	4315935	4315948	(86022397)	+	(CCTC)n	Simple_repeat	1	41	(64)	1400934
18	26.0	0.0	4.6	chr16	4315949	4316013	(86022332)	+	(CCT)n	Simple_repeat	1	65	(0)	1400935
23	30.0	0.0	0.0	chr16	4316407	4316479	(86021866)	+	(CGCT)n	Simple_repeat	1	73	(0)	1400938
13	14.0	0.0	5.7	chr16	4316513	4316547	(86021798)	+	(GGCCG)n	Simple_repeat	1	35	(0)	1400939
25	15.6	3.5	0.0	chr16	4351130	4351186	(85987159)	+	(GGCGCCC)n	Simple_repeat	1	59	(0)	1400992
15	16.9	0.0	2.9	chr16	4847517	4847551	(85490794)	+	(GCG)n	Simple_repeat	1	35	(0)	1402011
724	13.8	0.0	3.7	chr16	4908192	4908343	(85430002)	+	FLAM_C	SINE/Alu	8	220	(82)	1402107
24	9.1	2.8	0.0	chr16	4908411	4908446	(85429899)	+	(CT)n	Simple_repeat	1	37	(0)	1402108
16	9.3	2.7	2.6	chr16	4908526	4908553	(85429792)	+	(TGAT)n	Simple_repeat	1	27	(0)	1402109
1934	13.6	0.0	1.1	chr16	4908554	4908839	(85429506)	C	AluJb	SINE/Alu	(28)	284	2	1402110
19	26.5	0.0	5.1	chr16	5098644	5098722	(85239623)	+	G-rich	Low_complexity	1	79	(0)	1402557
423	31.8	10.6	4.4	chr16	5098950	5099153	(85239192)	C	L2c	LINE/L2	(3)	3423	3206	1402558
45	15.9	0.0	0.0	chr16	5130434	5130513	(85207832)	+	(TCTC)n	Simple_repeat	1	80	(0)	1402633
14	10.9	5.0	9.5	chr16	8963818	8963877	(81374468)	+	(TCGGCG)n	Simple_repeat	1	63	(0)	1410168
32	16.0	7.9	1.8	chr16	8963924	8964025	(81374320)	+	(CGCGGAG)n	Simple_repeat	1	108	(0)	1410169
243	26.7	12.6	0.0	chr16	9039241	9039330	(81299015)	+	L2c	LINE/L2	3231	3333	(54)	1410411
34	0.0	0.0	0.0	chr16	9039371	9039399	(81298946)	+	(AG)n	Simple_repeat	1	29	(0)	1410412
35	0.0	0.0	0.0	chr16	9145968	9145997	(81192348)	+	(CT)n	Simple_repeat	1	30	(0)	1410678
25	0.0	0.0	0.0	chr16	9145998	9146025	(81192320)	+	(GT)n	Simple_repeat	1	28	(0)	1410679
50	4.0	0.0	0.0	chr16	9146026	9146077	(81192268)	+	(GA)n	Simple_repeat	1	52	(0)	1410680
59	3.5	0.0	0.0	chr16	9426517	9426575	(80911770)	+	(AG)n	Simple_repeat	1	59	(0)	1411336
1837	20.6	9.5	1.8	chr16	10562189	10562336	(79776009)	+	MLT1H	LTR/ERVL-MaLR	77	235	(314)	1413717
66	5.4	0.0	0.0	chr16	10562337	10562413	(79775932)	+	(TCTCTC)n	Simple_repeat	1	77	(0)	1413718
1837	20.6	9.5	1.8	chr16	10562414	10562700	(79775645)	+	MLT1H	LTR/ERVL-MaLR	236	548	(1)	1413717
755	14.1	0.0	5.8	chr16	11443376	11443496	(78894849)	+	AluSz6	SINE/Alu	198	311	(1)	1415685
234	15.8	0.0	0.0	chr16	11443522	11443559	(78894786)	+	L2b	LINE/L2	3329	3366	(9)	1415686
439	25.9	6.7	1.7	chr16	11443631	11443781	(78894564)	C	MIR	SINE/MIR	(51)	217	54	1415687
21	30.8	0.0	0.0	chr16	11742653	11742720	(78595625)	+	(GCC)n	Simple_repeat	1	68	(0)	1416395
2016	15.4	0.7	0.7	chr16	12088804	12089102	(78249243)	+	AluSx1	SINE/Alu	1	299	(13)	1417229
39	11.0	4.2	0.0	chr16	12089103	12089173	(78249172)	+	GA-rich	Low_complexity	1	74	(0)	1417230
977	18.0	1.2	0.0	chr16	12089196	12089356	(78248989)	+	FRAM	SINE/Alu	12	174	(2)	1417231
409	27.1	2.0	0.8	chr16	13126409	13127589	(77210756)	+	GA-rich	Low_complexity	1	1205	(0)	1419449
65	1.7	0.0	0.0	chr16	13907087	13907146	(76431199)	+	(GA)n	Simple_repeat	1	60	(0)	1421126
2233	9.2	0.0	4.4	chr16	14371511	14371825	(75966520)	+	AluSx	SINE/Alu	1	301	(11)	1421987
18	12.6	0.0	0.0	chr16	14371873	14371899	(75966446)	+	(AG)n	Simple_repeat	1	27	(0)	1421988
301	21.1	1.1	1.3	chr16	15055601	15055692	(75282653)	+	MIR3	SINE/MIR	65	148	(60)	1423501
556	18.0	7.5	0.9	chr16	15421377	15421488	(74916857)	+	MER5A1	DNA/hAT-Charlie	1	120	(46)	1424352
37	0.0	0.0	0.0	chr16	15421582	15421613	(74916732)	+	(TC)n	Simple_repeat	1	32	(0)	1424353
1521	18.7	0.4	0.4	chr16	15421624	15421874	(74916471)	C	AluJr	SINE/Alu	(61)	251	1	1424354
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
2143	12.5	1.0	1.3	chr16	15626678	15626989	(74711356)	+	AluSx1	SINE/Alu	1	311	(1)	1424830
22	22.4	1.8	0.0	chr16	15626990	15627067	(74711278)	+	A-rich	Low_complexity	1	79	(0)	1424831
20	15.8	2.7	0.0	chr16	15627006	15627042	(74711303)	+	GA-rich	Low_complexity	1	38	(0)	1424832
1371	14.9	0.9	1.4	chr16	15627070	15627290	(74711055)	+	AluJo	SINE/Alu	1	220	(92)	1424833
61	32.2	1.8	2.5	chr16	15857923	15858198	(74480147)	+	(TC)n	Simple_repeat	1	281	(0)	1425404
2381	10.3	0.3	0.0	chr16	15999335	15999644	(74338701)	+	AluSp	SINE/Alu	2	312	(1)	1425808
753	17.2	0.0	0.0	chr16	15999649	15999764	(74338581)	C	AluJo	SINE/Alu	(195)	117	2	1425809
73	2.7	1.3	0.0	chr16	15999765	15999839	(74338506)	+	(CT)n	Simple_repeat	1	76	(0)	1425810
1163	12.1	0.0	0.0	chr16	15999844	16000000	(74338345)	C	AluSc	SINE/Alu	(0)	309	153	1425811
71	4.2	0.0	0.0	chr16	16439581	16439654	(73898691)	+	(AG)n	Simple_repeat	1	74	(0)	1426816
2041	13.2	0.0	0.0	chr16	16439655	16439927	(73898418)	C	AluSx	SINE/Alu	(39)	273	1	1426817
282	12.9	3.5	2.8	chr16	16449375	16449517	(73888828)	+	HERV17-int	LTR/ERV1	699	842	(7784)	1426844
1861	20.0	4.4	1.0	chr16	16449584	16449977	(73888368)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1426845
67	0.0	0.0	0.0	chr16	18740685	18740741	(71597604)	+	(AT)n	Simple_repeat	1	57	(0)	1431830
657	28.4	7.9	0.1	chr16	18740751	18740979	(71597366)	+	MIRb	SINE/MIR	6	259	(9)	1431831
977	21.0	0.0	0.0	chr16	18784097	18784253	(71554092)	+	FAM	SINE/Alu	1	157	(28)	1431950
2235	10.8	2.1	0.0	chr16	18784260	18784545	(71553800)	C	AluSp	SINE/Alu	(21)	292	1	1431951
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
2278	10.8	1.0	0.0	chr16	19101990	19102294	(71236051)	C	AluSg	SINE/Alu	(2)	308	1	1432703
270	26.2	6.7	4.5	chr16	19102309	19102396	(71235949)	+	MIR	SINE/MIR	172	261	(1)	1432701
186	29.1	3.5	0.0	chr16	19131541	19131595	(71206750)	C	L2a	LINE/L2	(0)	3426	3370	1432770
431	15.8	1.3	2.6	chr16	19131596	19131673	(71206672)	+	MER58A	DNA/hAT-Charlie	5	81	(143)	1432771
287	19.4	2.7	1.4	chr16	19131812	19131884	(71206461)	C	HAL1b	LINE/L1	(23)	2398	2325	1432772
148	9.4	2.3	3.0	chr16	19321188	19321446	(71016899)	+	(TTTC)n	Simple_repeat	1	265	(0)	1433264
690	21.7	1.3	0.0	chr16	19321447	19321598	(71016747)	C	BC200	scRNA	(38)	162	9	1433265
12	13.7	0.0	0.0	chr16	19521893	19521916	(70816429)	+	(CAG)n	Simple_repeat	1	24	(0)	1433766
1914	12.8	3.9	2.6	chr16	19541353	19541637	(70796708)	+	AluSx	SINE/Alu	3	291	(21)	1433802
50	0.0	2.2	0.0	chr16	19541638	19541683	(70796662)	+	(AG)n	Simple_repeat	1	47	(0)	1433803
1914	12.8	3.9	2.6	chr16	19541684	19541703	(70796642)	+	AluSx	SINE/Alu	292	311	(1)	1433802
22	2.6	7.3	2.3	chr16	19541710	19541750	(70796595)	+	(AGGGA)n	Simple_repeat	1	44	(0)	1433804
49	0.0	0.0	0.0	chr16	19945458	19945499	(70392846)	+	(TC)n	Simple_repeat	1	42	(0)	1434766
1733	14.6	5.0	0.0	chr16	21517886	21518178	(68820167)	C	AluSx	SINE/Alu	(0)	312	1	1438056
46	0.0	0.0	0.0	chr16	21935154	21935192	(68403153)	+	(TG)n	Simple_repeat	1	39	(0)	1438960
376	27.0	3.9	0.7	chr16	22063949	22064050	(68274295)	+	MIR3	SINE/MIR	34	137	(93)	1439212
267	19.0	4.9	1.7	chr16	22064064	22064122	(68274223)	+	CR1-3_Croc	LINE/CR1	3545	3605	(0)	1439213
476	31.0	9.7	2.9	chr16	22116083	22116482	(68221863)	+	L1MC4	LINE/L1	947	1525	(1218)	1439309
14	21.5	2.2	2.2	chr16	22206227	22206271	(68132074)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1439529
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
69	1.1	1.9	6.6	chr16	22396066	22396169	(67942176)	+	(TCTT)n	Simple_repeat	1	106	(0)	1439964
20	25.6	1.7	0.0	chr16	22396170	22396185	(67942160)	+	(TCTC)n	Simple_repeat	1	16	(0)	1439965
29	0.0	0.0	0.0	chr16	22396194	22396218	(67942127)	+	(TC)n	Simple_repeat	1	25	(0)	1439966
2170	11.1	0.7	0.3	chr16	22396219	22396506	(67941839)	C	AluSz	SINE/Alu	(23)	289	1	1439967
33	3.1	0.0	0.0	chr16	22397536	22397568	(67940777)	+	(AG)n	Simple_repeat	1	33	(0)	1439970
280	29.9	0.0	3.5	chr16	22397599	22397694	(67940651)	C	MIR	SINE/MIR	(151)	117	25	1439971
587	18.4	12.1	0.0	chr16	22397696	22397804	(67940541)	+	FLAM_A	SINE/Alu	1	124	(18)	1439972
1389	19.5	5.3	13.7	chr16	22643062	22643274	(67695071)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	174	1440508
34	3.0	0.0	0.0	chr16	22643275	22643308	(67695037)	+	(GA)n	Simple_repeat	1	34	(0)	1440509
1389	19.5	5.3	13.7	chr16	22643309	22643361	(67694984)	C	MLT1A	LTR/ERVL-MaLR	(201)	173	151	1440508
2191	10.9	0.3	0.0	chr16	22643362	22643644	(67694701)	+	AluSp	SINE/Alu	1	284	(29)	1440510
50	7.4	1.4	0.0	chr16	22855669	22855739	(67482606)	+	(TCTC)n	Simple_repeat	1	72	(0)	1440961
536	30.4	10.9	1.2	chr16	22855750	22856005	(67482340)	C	MLT1K	LTR/ERVL-MaLR	(198)	397	114	1440962
31	24.2	1.4	0.0	chr16	23143537	23143624	(67194721)	+	GA-rich	Low_complexity	1	89	(0)	1441504
884	19.9	3.2	0.0	chr16	23143700	23143880	(67194465)	C	MER20	DNA/hAT-Charlie	(4)	215	29	1441505
40	0.0	0.0	0.0	chr16	23258801	23258834	(67079511)	+	(TC)n	Simple_repeat	1	34	(0)	1441800
12	18.8	5.8	3.6	chr16	23558049	23558100	(66780245)	+	(CGGCAGC)n	Simple_repeat	1	55	(0)	1442575
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
34	27.9	2.6	4.4	chr16	23717996	23718149	(66620196)	+	GA-rich	Low_complexity	1	158	(0)	1442930
269	23.3	0.0	0.0	chr16	23859712	23859771	(66478574)	+	L3	LINE/CR1	3702	3761	(338)	1443307
38	6.4	0.0	0.0	chr16	23859869	23859917	(66478428)	+	(GA)n	Simple_repeat	1	49	(0)	1443308
193	23.9	2.6	2.4	chr16	24113076	24113642	(66224703)	+	(TTTC)n	Simple_repeat	1	582	(0)	1443900
323	33.0	8.5	1.1	chr16	24143928	24144111	(66194234)	+	L4_A_Mam	LINE/RTE-X	4578	4776	(214)	1443961
47	21.1	4.7	1.5	chr16	24144112	24144239	(66194106)	+	GA-rich	Low_complexity	1	134	(0)	1443962
15	31.8	0.0	3.6	chr16	24144240	24144295	(66194050)	+	(TA)n	Simple_repeat	1	56	(0)	1443963
2260	9.5	0.0	2.3	chr16	24144296	24144600	(66193745)	C	AluSz	SINE/Alu	(14)	298	1	1443964
70	0.0	0.0	0.0	chr16	24257369	24257428	(66080917)	+	(GA)n	Simple_repeat	1	60	(0)	1444215
826	24.3	5.1	0.0	chr16	24494708	24494876	(65843469)	+	AluJb	SINE/Alu	134	311	(1)	1444829
31	0.0	0.0	0.0	chr16	24494905	24494931	(65843414)	+	(GA)n	Simple_repeat	1	27	(0)	1444830
312	18.5	0.0	0.2	chr16	24494932	24494998	(65843347)	+	MIR	SINE/MIR	27	93	(115)	1444831
3734	14.1	3.1	2.0	chr16	24495000	24495637	(65842708)	C	LTR9D	LTR/ERV1	(0)	645	1	1444832
1800	10.6	0.4	0.9	chr16	24609234	24609459	(65728886)	C	AluSx	SINE/Alu	(87)	225	1	1445088
71	4.2	0.0	0.0	chr16	24609534	24609607	(65728738)	+	(GA)n	Simple_repeat	1	74	(0)	1445089
1364	15.2	0.0	5.5	chr16	24840970	24841205	(65497140)	C	AluJb	SINE/Alu	(89)	223	1	1445623
33	3.1	0.0	0.0	chr16	24841309	24841341	(65497004)	+	(AG)n	Simple_repeat	1	33	(0)	1445624
265	20.1	2.5	7.6	chr16	24841397	24841524	(65496821)	C	MIRc	SINE/MIR	(77)	185	72	1445625
457	21.8	22.6	0.6	chr16	25006586	25006766	(65331579)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	1445993
205	26.1	20.7	4.2	chr16	25006775	25006990	(65331355)	C	L2	LINE/L2	(915)	2504	2244	1445994
2573	17.3	2.5	4.2	chr16	25049628	25050152	(65288193)	+	Tigger3b	DNA/TcMar-Tigger	25	540	(691)	1446106
437	28.1	2.5	3.8	chr16	25253202	25253360	(65084985)	C	MER102a	DNA/hAT-Charlie	(2)	328	172	1446578
26	14.5	7.0	1.3	chr16	25253369	25253439	(65084906)	+	(CCTTC)n	Simple_repeat	1	76	(0)	1446579
36	2.9	0.0	0.0	chr16	25253440	25253474	(65084871)	+	(CT)n	Simple_repeat	1	35	(0)	1446580
43	2.5	0.0	0.0	chr16	25325218	25325258	(65013087)	+	(AG)n	Simple_repeat	1	41	(0)	1446759
846	24.9	2.6	0.5	chr16	25325340	25325525	(65012820)	C	MER58A	DNA/hAT-Charlie	(34)	190	1	1446760
678	29.8	10.7	1.5	chr16	26053835	26054164	(64284181)	C	MLT1I	LTR/ERVL-MaLR	(27)	384	21	1448274
50	4.0	0.0	0.0	chr16	26054248	26054299	(64284046)	+	(GA)n	Simple_repeat	1	52	(0)	1448275
34	0.0	2.9	0.0	chr16	26054311	26054345	(64284000)	+	(GAA)n	Simple_repeat	1	36	(0)	1448276
219	22.6	3.0	1.8	chr16	26747283	26747873	(63590472)	+	(TC)n	Simple_repeat	1	609	(0)	1449612
48	2.1	0.0	2.0	chr16	27285116	27285165	(63053180)	+	(AG)n	Simple_repeat	1	50	(0)	1450769
301	32.3	9.0	6.8	chr16	27785139	27785711	(62552634)	+	L2b	LINE/L2	2652	3250	(125)	1451924
46	4.3	0.0	0.0	chr16	27785712	27785759	(62552586)	+	(GA)n	Simple_repeat	1	48	(0)	1451925
2156	9.0	0.0	0.7	chr16	27785761	27786038	(62552307)	C	AluSz	SINE/Alu	(35)	277	2	1451926
295	21.7	1.3	0.6	chr16	27869388	27870057	(62468288)	+	(CTCT)n	Simple_repeat	1	679	(0)	1452103
319	30.0	7.4	4.3	chr16	27870058	27870266	(62468079)	C	L1MEd	LINE/L1	(5899)	1187	972	1452104
96	20.3	1.5	0.5	chr16	27870267	27870471	(62467874)	+	(CT)n	Simple_repeat	1	208	(0)	1452105
12	19.6	2.9	0.0	chr16	27870512	27870546	(62467799)	+	(CATCTC)n	Simple_repeat	1	36	(0)	1452106
12	12.5	0.0	3.6	chr16	27898504	27898531	(62439814)	+	(TTTTG)n	Simple_repeat	1	28	(0)	1452177
23	13.7	3.9	1.9	chr16	27898533	27898583	(62439762)	+	(CCT)n	Simple_repeat	1	53	(0)	1452178
252	11.1	0.0	0.0	chr16	27898593	27898628	(62439717)	C	U2	snRNA	(152)	36	1	1452179
63	20.4	0.8	0.0	chr16	27898629	27898757	(62439588)	+	(CT)n	Simple_repeat	1	130	(0)	1452180
652	19.0	11.6	2.4	chr16	27898770	27898977	(62439368)	+	Charlie8	DNA/hAT-Charlie	59	266	(65)	1452181
1324	28.4	5.0	4.5	chr16	27911221	27911256	(62427089)	+	L2a	LINE/L2	2911	2957	(469)	1452213
48	2.1	2.0	0.0	chr16	27911257	27911305	(62427040)	+	(CT)n	Simple_repeat	1	50	(0)	1452214
1823	11.3	0.0	0.4	chr16	27911306	27911552	(62426793)	C	AluSx1	SINE/Alu	(27)	285	40	1452215
82	3.6	1.1	0.0	chr16	28322920	28323006	(62015339)	+	(CT)n	Simple_repeat	1	88	(0)	1453210
254	19.4	6.1	1.6	chr16	28323039	28323101	(62015244)	C	MIR3	SINE/MIR	(3)	205	140	1453211
28	0.0	3.3	0.0	chr16	28925338	28925367	(61412978)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	1454764
57	0.0	0.0	0.0	chr16	28929846	28929894	(61408451)	+	(AT)n	Simple_repeat	1	49	(0)	1454778
43	3.9	0.0	0.0	chr16	28929895	28929945	(61408400)	+	(GA)n	Simple_repeat	2	52	(0)	1454779
1586	15.2	5.6	0.4	chr16	28929949	28930204	(61408141)	C	AluSq	SINE/Alu	(43)	270	1	1454780
619	12.3	0.0	12.3	chr16	28945421	28945522	(61392823)	C	FLAM_A	SINE/Alu	(26)	116	19	1454816
348	28.7	0.0	3.6	chr16	28945423	28945534	(61392811)	+	SVA_A	Retroposon/SVA	219	326	(1061)	1454818
32	25.2	1.2	1.1	chr16	29898383	29898468	(60439877)	+	(CT)n	Simple_repeat	1	87	(0)	1456814
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
187	32.6	0.0	0.0	chr16	30403923	30403971	(59934374)	+	L2c	LINE/L2	3273	3321	(66)	1457935
434	24.6	8.6	7.7	chr16	30404191	30404397	(59933948)	+	L2a	LINE/L2	2929	3137	(238)	1457945
19	0.0	0.0	0.0	chr16	30698719	30698742	(59639603)	+	(GAGC)n	Simple_repeat	1	24	(0)	1458688
15	7.3	3.2	3.1	chr16	30787523	30787553	(59550792)	+	(GGGCTG)n	Simple_repeat	1	32	(0)	1458842
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
146	22.1	1.8	0.2	chr16	31330672	31331036	(59007309)	+	GA-rich	Low_complexity	1	370	(0)	1460099
16	22.4	3.2	3.1	chr16	46691893	46691918	(43646427)	+	(CTCTTT)n	Simple_repeat	1	40	(0)	1465824
24	3.0	2.7	2.6	chr16	46691919	46691932	(43646413)	+	(CT)n	Simple_repeat	1	14	(0)	1465825
31	0.0	0.0	0.0	chr16	46691933	46691959	(43646386)	+	(CA)n	Simple_repeat	1	27	(0)	1465826
24	3.0	2.7	2.6	chr16	46691960	46691981	(43646364)	+	(CT)n	Simple_repeat	1	22	(0)	1465827
59	17.5	0.0	0.0	chr16	46830234	46830343	(43508002)	+	GA-rich	Low_complexity	1	110	(0)	1466113
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
182	29.3	16.3	4.4	chr16	47537641	47537781	(42800564)	C	L2	LINE/L2	(844)	2575	2407	1467319
36	0.0	0.0	0.0	chr16	47537873	47537903	(42800442)	+	(TC)n	Simple_repeat	1	31	(0)	1467321
1745	19.4	0.7	0.7	chr16	47537911	47538194	(42800151)	C	AluJb	SINE/Alu	(28)	284	1	1467322
1208	23.9	5.1	5.1	chr16	47952925	47953116	(42385229)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	174	1467870
66	3.1	0.0	0.0	chr16	47953117	47953181	(42385164)	+	(AG)n	Simple_repeat	1	65	(0)	1467871
1208	23.9	5.1	5.1	chr16	47953182	47953362	(42384983)	C	MLT1A	LTR/ERVL-MaLR	(201)	173	1	1467870
76	2.8	0.0	0.0	chr16	48881436	48881509	(41456836)	+	(TC)n	Simple_repeat	1	74	(0)	1469581
1371	14.4	8.5	23.3	chr16	49011715	49011942	(41326403)	C	MSTB	LTR/ERVL-MaLR	(2)	424	209	1469835
47	2.3	0.0	0.0	chr16	49011943	49011987	(41326358)	+	(GA)n	Simple_repeat	1	45	(0)	1469836
1371	14.4	8.5	23.3	chr16	49011988	49012264	(41326081)	C	MSTB	LTR/ERVL-MaLR	(218)	208	1	1469835
32	12.8	7.6	1.2	chr16	49855654	49855732	(40482613)	+	(GCTC)n	Simple_repeat	1	85	(0)	1471240
13	13.3	9.3	2.1	chr16	49855794	49855836	(40482509)	+	(CCG)n	Simple_repeat	1	47	(0)	1471241
35	10.3	0.0	1.9	chr16	50159195	50159240	(40179105)	+	(TC)n	Simple_repeat	1	46	(0)	1471945
2261	10.0	1.6	0.0	chr16	50159241	50159539	(40178806)	C	AluSp	SINE/Alu	(9)	304	1	1471946
613	28.9	12.6	7.6	chr16	50394507	50394879	(39943466)	+	MLT1K	LTR/ERVL-MaLR	48	437	(158)	1472385
32	3.2	0.0	0.0	chr16	50394880	50394911	(39943434)	+	(GA)n	Simple_repeat	1	32	(0)	1472386
613	28.9	12.6	7.6	chr16	50394912	50395053	(39943292)	+	MLT1K	LTR/ERVL-MaLR	438	593	(2)	1472385
1072	13.5	0.0	3.1	chr16	50414465	50414627	(39923718)	C	FRAM	SINE/Alu	(8)	168	11	1472438
39	2.3	2.2	2.1	chr16	50414632	50414677	(39923668)	+	(TC)n	Simple_repeat	1	47	(0)	1472439
420	32.5	12.8	5.0	chr16	50521011	50521349	(39816996)	C	L1MC4	LINE/L1	(5880)	1291	925	1472657
61	0.0	0.0	0.0	chr16	51441060	51441111	(38897234)	+	(GA)n	Simple_repeat	1	52	(0)	1474367
18	21.7	0.0	3.8	chr16	51592927	51592937	(38745408)	+	A-rich	Low_complexity	1	24	(29)	1474627
24	6.8	0.0	0.0	chr16	51592938	51592968	(38745377)	+	(AG)n	Simple_repeat	1	31	(0)	1474628
18	21.7	0.0	3.8	chr16	51592969	51592979	(38745366)	+	A-rich	Low_complexity	25	53	(0)	1474627
75	6.1	0.0	0.0	chr16	52283197	52283282	(38055063)	+	(TC)n	Simple_repeat	1	86	(0)	1475769
53	5.3	0.0	0.0	chr16	52704957	52705015	(37633330)	+	(CT)n	Simple_repeat	1	59	(0)	1476438
2233	11.1	1.0	2.2	chr16	53996827	53997142	(36341203)	+	AluSx1	SINE/Alu	1	312	(0)	1478764
31	17.1	2.8	0.9	chr16	53997143	53997213	(36341132)	+	GA-rich	Low_complexity	1	72	(0)	1478765
1155	7.7	5.5	0.1	chr16	53997214	53997404	(36340941)	C	THE1C	LTR/ERVL-MaLR	(146)	209	1	1478766
2286	11.2	0.0	1.0	chr16	54148144	54148479	(36189866)	+	AluSx1	SINE/Alu	1	312	(0)	1478970
16	13.2	0.0	0.0	chr16	54148489	54148513	(36189832)	+	(GT)n	Simple_repeat	1	25	(0)	1478971
37	8.0	1.9	0.0	chr16	54148513	54148565	(36189780)	+	(GA)n	Simple_repeat	1	54	(0)	1478972
643	25.6	14.1	8.9	chr16	54244158	54244585	(36093760)	C	LTR33	LTR/ERVL	(47)	468	15	1479148
20	13.0	2.9	0.0	chr16	54569176	54569210	(35769135)	+	(TC)n	Simple_repeat	1	36	(0)	1479765
2173	13.8	3.1	5.6	chr16	54753836	54754226	(35584119)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1480072
47	9.6	3.3	1.1	chr16	54757061	54757151	(35581194)	+	(TC)n	Simple_repeat	1	94	(0)	1480077
35	16.6	0.0	0.0	chr16	54757152	54757179	(35581166)	+	(AC)n	Simple_repeat	1	28	(0)	1480078
54	5.3	0.0	0.0	chr16	54942706	54942765	(35395580)	+	(CT)n	Simple_repeat	1	60	(0)	1480405
832	14.2	0.0	0.8	chr16	54942775	54942894	(35395451)	C	AluJo	SINE/Alu	(193)	119	1	1480406
22	9.2	0.0	0.0	chr16	54963677	54963711	(35374634)	+	(TCTCTC)n	Simple_repeat	1	35	(0)	1480458
1821	17.8	6.5	10.0	chr16	54974984	54975067	(35363278)	C	MLT2C2	LTR/ERVL	(0)	464	408	1480486
43	4.5	0.0	0.0	chr16	54975068	54975113	(35363232)	+	(GA)n	Simple_repeat	1	46	(0)	1480487
1821	17.8	6.5	10.0	chr16	54975114	54975248	(35363097)	C	MLT2C2	LTR/ERVL	(57)	407	272	1480486
2412	10.7	3.9	0.8	chr16	54975249	54975617	(35362728)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1480488
38	2.8	0.0	0.0	chr16	55295463	55295499	(35042846)	+	(CT)n	Simple_repeat	1	37	(0)	1481159
58	7.3	0.0	0.0	chr16	55426519	55426590	(34911755)	+	(CT)n	Simple_repeat	1	72	(0)	1481395
52	0.0	2.1	0.0	chr16	55427621	55427668	(34910677)	+	(AG)n	Simple_repeat	1	49	(0)	1481398
1561	23.9	12.4	3.4	chr16	55427669	55427839	(34910506)	C	MLT1F2	LTR/ERVL-MaLR	(365)	195	3	1481397
84	31.4	2.3	2.8	chr16	55647338	55647682	(34690663)	+	A-rich	Low_complexity	1	353	(0)	1481735
61	0.0	0.0	0.0	chr16	55691231	55691282	(34647063)	+	(GA)n	Simple_repeat	1	52	(0)	1481821
112	18.8	6.5	0.0	chr16	55847136	55847414	(34490931)	+	(CT)n	Simple_repeat	1	297	(0)	1482109
20	23.8	3.6	3.5	chr16	56191467	56191550	(34146795)	+	(TCCCTC)n	Simple_repeat	1	87	(0)	1482660
9017	17.6	10.3	9.6	chr16	57491334	57491666	(32846679)	C	L1MDa	LINE/L1	(2277)	3992	3558	1485156
34	5.6	0.0	0.0	chr16	57491667	57491704	(32846641)	+	(TC)n	Simple_repeat	1	38	(0)	1485162
9017	17.6	10.3	9.6	chr16	57491705	57492204	(32846141)	C	L1MDa	LINE/L1	(2980)	3557	3074	1485156
1147	15.5	4.3	1.0	chr16	57929268	57929498	(32408847)	C	THE1D	LTR/ERVL-MaLR	(0)	465	185	1486083
1276	12.6	6.0	12.6	chr16	57929502	57929857	(32408488)	C	THE1D	LTR/ERVL-MaLR	(48)	333	3	1486084
21	20.2	0.0	4.8	chr16	58025806	58025867	(32312478)	+	(CGCT)n	Simple_repeat	1	62	(0)	1486285
1196	22.5	4.2	5.7	chr16	58238934	58239268	(32099077)	C	L1ME1	LINE/L1	(1301)	5018	4689	1486707
38	0.0	0.0	0.0	chr16	58239269	58239301	(32099044)	+	(TC)n	Simple_repeat	1	33	(0)	1486709
2841	23.9	3.4	2.0	chr16	58239304	58240235	(32098110)	C	L1ME1	LINE/L1	(3119)	3200	2259	1486707
52	8.4	2.6	0.0	chr16	58267987	58268063	(32070282)	+	(GA)n	Simple_repeat	1	79	(0)	1486770
404	32.8	4.2	5.1	chr16	58268105	58268319	(32070026)	C	MamRep137	DNA/TcMar?	(289)	221	9	1486746
79	4.9	0.0	0.0	chr16	63185896	63185980	(27152365)	+	(AG)n	Simple_repeat	1	85	(0)	1494496
58	4.9	0.0	0.0	chr16	64527340	64527402	(25810943)	+	(GA)n	Simple_repeat	1	63	(0)	1496491
15	18.3	7.5	4.2	chr16	66751661	66751727	(23586618)	+	(GCC)n	Simple_repeat	1	72	(0)	1500336
13	28.9	1.4	5.3	chr16	66751777	66751850	(23586495)	+	(GGC)n	Simple_repeat	1	75	(0)	1500337
281	32.8	3.0	0.0	chr16	66899830	66899960	(23438385)	+	L1M5	LINE/L1	5669	5803	(320)	1500654
24	20.6	1.6	1.6	chr16	66960328	66960419	(23377926)	+	(CCCT)n	Simple_repeat	1	92	(0)	1500759
1814	17.5	2.9	0.7	chr16	66960420	66960441	(23377904)	C	AluJo	SINE/Alu	(2)	310	289	1500760
35	7.7	7.1	0.0	chr16	66960442	66960511	(23377834)	+	(TC)n	Simple_repeat	1	75	(0)	1500761
1814	17.5	2.9	0.7	chr16	66960512	66960791	(23377554)	C	AluJo	SINE/Alu	(24)	288	1	1500760
14	17.9	6.5	4.5	chr16	67014089	67014150	(23324195)	+	(CCGC)n	Simple_repeat	1	66	(0)	1500882
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
28	0.0	0.0	0.0	chr16	67314800	67314830	(23023515)	+	(TA)n	Simple_repeat	1	31	(0)	1501418
51	0.0	0.0	0.0	chr16	67314831	67314874	(23023471)	+	(AG)n	Simple_repeat	1	44	(0)	1501419
1516	17.1	0.4	2.4	chr16	67314879	67315124	(23023221)	C	AluJr	SINE/Alu	(35)	277	37	1501420
1294	17.5	14.4	2.1	chr16	67330888	67331060	(23007285)	C	MSTD	LTR/ERVL-MaLR	(1)	395	211	1501452
58	1.9	0.0	0.0	chr16	67331061	67331114	(23007231)	+	(GA)n	Simple_repeat	1	54	(0)	1501453
1294	17.5	14.4	2.1	chr16	67331115	67331267	(23007078)	C	MSTD	LTR/ERVL-MaLR	(186)	210	23	1501452
17	20.1	0.0	4.1	chr16	67562048	67562096	(22776249)	+	(GGCCG)n	Simple_repeat	1	49	(0)	1501889
2160	11.3	1.0	1.3	chr16	67782444	67782752	(22555593)	C	AluSx	SINE/Alu	(4)	308	1	1502335
16	17.4	0.0	4.7	chr16	67842337	67842379	(22495966)	+	(GCGG)n	Simple_repeat	1	43	(0)	1502467
21	20.6	3.6	0.0	chr16	68235984	68236039	(22102306)	+	(GCG)n	Simple_repeat	1	58	(0)	1503209
21	30.9	0.0	4.1	chr16	68236040	68236062	(22102283)	+	G-rich	Low_complexity	43	98	(0)	1503208
1571	17.4	0.0	8.4	chr16	69609699	69609997	(20728348)	+	AluJb	SINE/Alu	1	274	(38)	1506203
23	9.2	2.9	0.0	chr16	69609999	69610033	(20728312)	+	(AG)n	Simple_repeat	1	36	(0)	1506204
955	12.8	0.0	0.0	chr16	69620452	69620576	(20717769)	+	AluJo	SINE/Alu	1	125	(187)	1506219
17	12.5	0.0	0.0	chr16	69620701	69620726	(20717619)	+	(AG)n	Simple_repeat	1	26	(0)	1506220
441	29.2	24.1	0.6	chr16	69620768	69621125	(20717220)	C	L3	LINE/CR1	(754)	3345	2877	1506221
217	28.9	7.8	2.4	chr16	70578366	70578450	(19759895)	+	MIRc	SINE/MIR	42	131	(137)	1508282
1526	11.3	0.0	7.0	chr16	70578453	70578708	(19759637)	C	AluJo	SINE/Alu	(11)	301	64	1508285
76	2.8	0.0	0.0	chr16	71521009	71521082	(18817263)	+	(CT)n	Simple_repeat	1	74	(0)	1509841
2273	9.2	0.3	0.0	chr16	71521083	71521364	(18816981)	C	AluSp	SINE/Alu	(30)	283	1	1509842
2246	10.5	0.3	0.0	chr16	71819662	71819955	(18518390)	+	AluSc8	SINE/Alu	3	297	(14)	1510445
47	0.0	0.0	0.0	chr16	71819959	71819998	(18518347)	+	(AG)n	Simple_repeat	1	40	(0)	1510446
1739	12.5	0.0	14.5	chr16	71819999	71820207	(18518138)	+	AluJb	SINE/Alu	129	301	(11)	1510443
2170	9.9	0.7	0.7	chr16	71946977	71947269	(18391076)	+	AluSq2	SINE/Alu	3	295	(18)	1510692
63	0.0	0.0	0.0	chr16	72284988	72285041	(18053304)	+	(TC)n	Simple_repeat	1	54	(0)	1511244
53	6.0	0.0	3.9	chr16	73059333	73059409	(17278936)	+	(AC)n	Simple_repeat	1	77	(0)	1512339
12	26.3	4.5	0.0	chr16	73059467	73059510	(17278835)	+	(TTTC)n	Simple_repeat	1	46	(0)	1512340
46	0.0	0.0	0.0	chr16	73059525	73059563	(17278782)	+	(TC)n	Simple_repeat	1	39	(0)	1512341
25	12.0	4.4	0.0	chr16	73060495	73060539	(17277806)	+	(TC)n	Simple_repeat	1	47	(0)	1512343
18	0.0	0.0	0.0	chr16	73070711	73070730	(17267615)	+	(TC)n	Simple_repeat	1	20	(0)	1512351
20	6.5	0.0	2.9	chr16	73096162	73096195	(17242150)	+	(CTGC)n	Simple_repeat	1	34	(0)	1512405
18	12.2	0.0	0.0	chr16	73172646	73172672	(17165673)	+	(GA)n	Simple_repeat	1	27	(0)	1512568
41	13.9	0.0	0.0	chr16	73483299	73483369	(16854976)	+	(GAGA)n	Simple_repeat	1	71	(0)	1513086
75	15.5	3.5	0.0	chr16	73543845	73543988	(16794357)	+	GA-rich	Low_complexity	1	149	(0)	1513167
2055	29.0	12.2	3.4	chr16	74247074	74247473	(16090872)	C	HAL1	LINE/L1	(1142)	1365	935	1514261
43	2.5	0.0	0.0	chr16	74247474	74247514	(16090831)	+	(CT)n	Simple_repeat	1	41	(0)	1514266
2055	29.0	12.2	3.4	chr16	74247515	74248268	(16090077)	C	HAL1	LINE/L1	(1573)	934	95	1514261
19	6.8	6.5	0.0	chr16	74567160	74567190	(15771155)	+	(TG)n	Simple_repeat	1	33	(0)	1514926
33	6.9	2.2	0.0	chr16	74567201	74567246	(15771099)	+	(GA)n	Simple_repeat	1	47	(0)	1514927
717	13.8	0.9	1.7	chr16	75073011	75073118	(15265227)	+	AluJo	SINE/Alu	4	111	(201)	1516058
45	2.4	0.0	0.0	chr16	75073119	75073161	(15265184)	+	(TC)n	Simple_repeat	1	43	(0)	1516059
3462	18.1	3.7	3.6	chr16	75084919	75085725	(15252620)	C	L1ME2z	LINE/L1	(167)	6277	5470	1516084
2182	19.9	7.8	3.7	chr16	75085752	75085786	(15252559)	C	MLT2B1	LTR/ERVL	(2)	518	484	1516085
32	3.2	0.0	0.0	chr16	75085787	75085818	(15252527)	+	(AG)n	Simple_repeat	1	32	(0)	1516086
2182	19.9	7.8	3.7	chr16	75085819	75086263	(15252082)	C	MLT2B1	LTR/ERVL	(37)	483	17	1516085
441	27.5	17.9	0.0	chr16	75305483	75305675	(15032670)	+	MIR	SINE/MIR	13	247	(15)	1516502
1708	22.2	8.7	0.2	chr16	75458289	75458739	(14879606)	+	MLT1D	LTR/ERVL-MaLR	1	493	(12)	1516838
1118	27.7	6.0	5.8	chr16	75462508	75462981	(14875364)	+	L1MC4	LINE/L1	7408	7891	(151)	1516846
287	30.0	3.0	1.5	chr16	75463057	75463210	(14875135)	+	L1ME3Cz	LINE/L1	869	985	(12)	1516848
302	36.2	0.0	4.1	chr16	77544552	77544698	(12793647)	C	L3	LINE/CR1	(7)	4092	3952	1520020
247	24.4	19.1	3.7	chr16	77544765	77544811	(12793534)	C	L3	LINE/CR1	(1121)	2978	2933	1520021
34	3.0	0.0	0.0	chr16	77544812	77544845	(12793500)	+	(TC)n	Simple_repeat	1	34	(0)	1520022
247	24.4	19.1	3.7	chr16	77544846	77544933	(12793412)	C	L3	LINE/CR1	(1167)	2932	2817	1520021
709	26.3	5.3	0.1	chr16	77570710	77570882	(12767463)	+	LTR33A	LTR/ERVL	5	196	(319)	1520067
66	4.4	0.0	0.0	chr16	77570883	77570952	(12767393)	+	(TC)n	Simple_repeat	1	70	(0)	1520068
43	0.0	0.0	0.0	chr16	78072847	78072883	(12265462)	+	(TC)n	Simple_repeat	1	37	(0)	1521064
17	15.6	0.0	0.0	chr16	78072885	78072913	(12265432)	+	(TG)n	Simple_repeat	1	29	(0)	1521065
37	28.3	1.6	2.3	chr16	78181096	78181224	(12157121)	+	GA-rich	Low_complexity	1	131	(0)	1521275
18	20.3	0.0	0.0	chr16	78210475	78210509	(12127836)	+	(AC)n	Simple_repeat	1	35	(0)	1521324
29	10.0	0.0	0.0	chr16	78210510	78210552	(12127793)	+	(CT)n	Simple_repeat	1	43	(0)	1521325
516	30.9	4.7	3.2	chr16	78266526	78266776	(12071569)	+	MIR	SINE/MIR	2	256	(6)	1521433
51	6.8	0.0	0.0	chr16	78266789	78266850	(12071495)	+	(TC)n	Simple_repeat	1	62	(0)	1521434
2709	8.5	0.6	0.0	chr16	78266855	78267207	(12071138)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1521435
1033	23.5	11.2	3.9	chr16	78700127	78700312	(11638033)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	175	1522213
57	0.0	0.0	0.0	chr16	78700313	78700361	(11637984)	+	(AG)n	Simple_repeat	1	49	(0)	1522214
1033	23.5	11.2	3.9	chr16	78700362	78700511	(11637834)	C	MLT1A0	LTR/ERVL-MaLR	(191)	174	1	1522213
13	19.6	0.0	0.0	chr16	79071945	79071974	(11266371)	+	(TTCA)n	Simple_repeat	1	30	(0)	1522910
1738	17.0	0.4	1.4	chr16	79072002	79072277	(11266068)	+	AluJr	SINE/Alu	2	274	(38)	1522911
183	21.7	9.4	0.9	chr16	79391834	79392545	(10945800)	+	GA-rich	Low_complexity	1	779	(0)	1523456
29	6.2	0.0	0.0	chr16	79601656	79601689	(10736656)	+	(AC)n	Simple_repeat	1	34	(0)	1523839
15	19.9	4.8	0.0	chr16	79717130	79717150	(10621195)	+	(TC)n	Simple_repeat	1	21	(0)	1524043
29	3.2	0.0	0.0	chr16	79717151	79717182	(10621163)	+	(CTCTTG)n	Simple_repeat	1	32	(0)	1524044
15	19.9	4.8	0.0	chr16	79717183	79717202	(10621143)	+	(TC)n	Simple_repeat	2	23	(0)	1524045
813	19.4	20.5	7.5	chr16	80218592	80218695	(10119650)	+	MLT1A	LTR/ERVL-MaLR	5	178	(196)	1524927
44	0.0	0.0	0.0	chr16	80218696	80218733	(10119612)	+	(TC)n	Simple_repeat	1	38	(0)	1524928
349	34.6	10.9	3.1	chr16	80787303	80787496	(9550849)	+	L3	LINE/CR1	3855	4065	(34)	1525886
22	0.0	9.4	0.0	chr16	80787592	80787623	(9550722)	+	(TC)n	Simple_repeat	1	35	(0)	1525891
302	27.6	4.3	0.0	chr16	81238138	81238271	(9100074)	+	Charlie30a	DNA/hAT-Charlie	585	724	(67)	1526849
849	18.0	0.0	0.0	chr16	81520422	81520549	(8817796)	+	FLAM_C	SINE/Alu	4	131	(12)	1527446
38	18.4	1.3	0.0	chr16	81520552	81520628	(8817717)	+	GA-rich	Low_complexity	1	78	(0)	1527447
69	0.0	0.0	0.0	chr16	83580449	83580507	(6757838)	+	(TC)n	Simple_repeat	1	59	(0)	1531253
1687	16.7	1.8	0.7	chr16	83580517	83580791	(6757554)	C	AluJr	SINE/Alu	(34)	278	1	1531254
46	14.6	1.6	3.2	chr16	83820721	83820840	(6517505)	+	(TC)n	Simple_repeat	1	118	(0)	1531653
345	26.2	3.2	2.4	chr16	83820846	83820970	(6517375)	C	MLT1L	LTR/ERVL-MaLR	(334)	276	151	1531650
933	14.6	1.8	0.0	chr16	84065437	84065600	(6272745)	+	L1MB7	LINE/L1	6018	6184	(0)	1532107
23	17.8	5.1	1.6	chr16	84065601	84065659	(6272686)	+	GA-rich	Low_complexity	1	62	(0)	1532108
1951	21.0	6.5	4.5	chr16	84139154	84139637	(6198708)	+	MLT1D	LTR/ERVL-MaLR	1	494	(11)	1532207
19	18.8	6.5	1.5	chr16	84145111	84145172	(6193173)	+	(CCG)n	Simple_repeat	1	66	(0)	1532219
658	28.3	11.6	0.2	chr16	85157829	85158242	(5180103)	C	LTR33A	LTR/ERVL	(21)	499	33	1534298
65	27.8	2.6	0.5	chr16	85248348	85248541	(5089804)	+	(CT)n	Simple_repeat	1	199	(0)	1534487
61	3.4	0.0	0.0	chr16	85294611	85294671	(5043674)	+	(CT)n	Simple_repeat	1	61	(0)	1534571
31	9.0	4.9	1.6	chr16	85766824	85766884	(4571461)	+	(CTTTT)n	Simple_repeat	1	64	(0)	1535411
41	8.2	0.0	0.0	chr16	85766885	85766937	(4571408)	+	(TC)n	Simple_repeat	1	53	(0)	1535412
1820	17.9	0.3	1.0	chr16	85766938	85767239	(4571106)	C	AluJr	SINE/Alu	(3)	309	10	1535413
36	5.2	0.0	0.0	chr16	85819500	85819539	(4518806)	+	(TC)n	Simple_repeat	1	40	(0)	1535502
2185	13.4	0.7	0.0	chr16	85819542	85819846	(4518499)	C	AluSz	SINE/Alu	(5)	307	1	1535503
2120	15.1	0.0	1.9	chr16	85855799	85855819	(4482526)	C	AluSp	SINE/Alu	(0)	313	293	1535569
39	0.0	10.2	1.5	chr16	85855820	85855878	(4482467)	+	(TC)n	Simple_repeat	1	65	(0)	1535570
2120	15.1	0.0	1.9	chr16	85855879	85856175	(4482170)	C	AluSp	SINE/Alu	(21)	292	1	1535569
53	0.0	0.0	0.0	chr16	86032617	86032661	(4305684)	+	(CT)n	Simple_repeat	1	45	(0)	1535911
17	30.0	0.0	5.6	chr16	86576147	86576211	(3762134)	+	(TTTGTTT)n	Simple_repeat	1	85	(0)	1536869
24	10.4	2.3	2.3	chr16	86576170	86576212	(3762133)	+	(TC)n	Simple_repeat	1	44	(0)	1536870
18	0.0	0.0	0.0	chr16	86576212	86576231	(3762114)	+	(T)n	Simple_repeat	1	20	(0)	1536871
31	11.0	0.0	0.0	chr16	86684272	86684320	(3654025)	+	(TC)n	Simple_repeat	1	49	(0)	1537076
41	15.1	0.0	0.0	chr16	86684321	86684375	(3653970)	+	(AT)n	Simple_repeat	1	55	(0)	1537077
270	24.9	0.6	2.0	chr16	86877393	86878118	(3460227)	+	(CT)n	Simple_repeat	1	730	(0)	1537403
53	8.8	0.0	0.0	chr16	86999387	86999458	(3338887)	+	(TC)n	Simple_repeat	1	72	(0)	1537622
14	24.0	4.0	0.0	chr16	86999472	86999521	(3338824)	+	(TTCTCCC)n	Simple_repeat	1	52	(0)	1537623
255	21.7	7.3	5.5	chr16	87070395	87070594	(3267751)	+	HERVIP10FH-int	LTR/ERV1	822	1025	(4077)	1537737
128	23.1	0.0	0.0	chr16	87131355	87131631	(3206714)	+	(TC)n	Simple_repeat	1	277	(0)	1537857
229	25.7	1.7	0.0	chr16	87178412	87178987	(3159358)	+	(CT)n	Simple_repeat	1	586	(0)	1537955
1786	20.9	0.0	1.9	chr16	87745983	87746297	(2592048)	+	AluJr	SINE/Alu	2	310	(2)	1538974
61	16.1	2.5	0.8	chr16	87746299	87746418	(2591927)	+	GA-rich	Low_complexity	1	123	(0)	1538975
107	2.4	3.1	1.5	chr16	87778384	87778513	(2559832)	+	(TCTT)n	Simple_repeat	1	134	(0)	1539046
26	15.5	0.0	0.0	chr16	87778514	87778558	(2559787)	+	(TCTCTC)n	Simple_repeat	1	45	(0)	1539047
1793	17.4	0.0	0.7	chr16	87778561	87778854	(2559491)	C	AluJr	SINE/Alu	(16)	296	5	1539048
12	21.3	4.4	2.1	chr16	88706337	88706381	(1631964)	+	(GCCC)n	Simple_repeat	1	47	(0)	1540345
254	30.9	4.1	4.3	chr16	88771233	88771366	(1566979)	C	MIRc	SINE/MIR	(93)	175	37	1540410
2120	11.6	1.0	2.0	chr16	88779037	88779337	(1559008)	C	AluSx1	SINE/Alu	(13)	299	2	1540416
2303	7.9	0.0	1.4	chr16	88808719	88809010	(1529335)	+	AluY	SINE/Alu	5	292	(19)	1540476
286	25.4	7.1	7.1	chr16	88809011	88809074	(1529271)	+	MLT1D	LTR/ERVL-MaLR	115	176	(451)	1540475
333	22.7	18.5	0.0	chr16	88809124	88809264	(1529081)	+	MLT1D	LTR/ERVL-MaLR	296	468	(37)	1540475
449	34.6	8.4	7.2	chr16	89240834	89240911	(1097434)	+	L1MEf	LINE/L1	5357	5425	(1119)	1540956
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
2182	7.1	0.0	1.7	chr16	89353058	89353351	(984994)	+	AluSg7	SINE/Alu	1	289	(20)	1541126
24	6.2	0.0	2.7	chr16	89353352	89353376	(984969)	+	(AG)n	Simple_repeat	1	25	(0)	1541127
2151	9.5	0.0	0.7	chr16	89353482	89353776	(984569)	C	AluSx	SINE/Alu	(16)	296	4	1541128
1033	17.4	2.4	6.1	chr16	89432726	89432938	(905407)	+	AluJb	SINE/Alu	64	268	(44)	1541249
60	0.0	1.8	0.0	chr16	89432945	89432999	(905346)	+	(TC)n	Simple_repeat	1	56	(0)	1541250
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
37	16.8	1.3	1.3	chr16	89828931	89829007	(509338)	+	(CTCC)n	Simple_repeat	1	78	(0)	1541935
16	10.0	4.0	7.7	chr16	89923322	89923398	(414947)	+	(GCCC)n	Simple_repeat	1	74	(0)	1542086
12	14.2	2.2	8.5	chr16	89923510	89923555	(414790)	+	(GCCCCGC)n	Simple_repeat	1	47	(0)	1542087
1481	18.6	5.8	2.7	chr17	237866	238166	(83019275)	+	AluJb	SINE/Alu	1	311	(1)	1544846
305	32.7	5.2	4.7	chr17	238167	238360	(83019081)	+	L1MEd	LINE/L1	1004	1200	(5886)	1544845
586	23.3	4.1	1.8	chr17	377051	377241	(82880200)	C	MLT1A	LTR/ERVL-MaLR	(4)	392	204	1545081
75	27.1	0.9	0.9	chr17	377246	377376	(82880065)	+	GA-rich	Low_complexity	1	132	(0)	1545082
819	14.3	0.0	2.4	chr17	377377	377502	(82879939)	+	AluJo	SINE/Alu	1	123	(189)	1545083
1077	17.5	3.7	0.0	chr17	386377	386559	(82870882)	C	AluJr	SINE/Alu	(57)	255	66	1545098
50	0.0	0.0	0.0	chr17	672110	672152	(82585289)	+	(AC)n	Simple_repeat	1	43	(0)	1545562
43	0.0	0.0	0.0	chr17	672176	672212	(82585229)	+	(TC)n	Simple_repeat	1	37	(0)	1545563
361	20.2	2.6	1.6	chr17	672305	672400	(82585041)	+	MLT1K	LTR/ERVL-MaLR	444	587	(8)	1545564
17	21.8	4.5	2.9	chr17	732578	732644	(82524797)	+	(GCCGA)n	Simple_repeat	1	70	(0)	1545707
37	10.0	3.0	1.4	chr17	872189	872255	(82385186)	+	(GAGG)n	Simple_repeat	1	69	(0)	1545936
210	32.0	5.2	5.2	chr17	956972	957106	(82300335)	+	L2c	LINE/L2	3239	3373	(14)	1546114
657	27.9	4.1	4.1	chr17	969151	969393	(82288048)	C	MIR	SINE/MIR	(10)	252	10	1546144
23	26.9	1.4	0.0	chr17	979427	979497	(82277944)	+	(CCGCCC)n	Simple_repeat	1	72	(0)	1546159
17	20.6	1.4	8.2	chr17	979694	979765	(82277676)	+	(GGC)n	Simple_repeat	1	73	(0)	1546160
189	32.2	5.6	6.3	chr17	1115308	1115433	(82142008)	+	L2b	LINE/L2	3013	3137	(238)	1546377
423	11.1	0.0	0.0	chr17	1242318	1242371	(82015070)	+	AluYh9	SINE/Alu	246	299	(12)	1546662
28	10.6	0.0	0.0	chr17	1242449	1242489	(82014952)	+	(AG)n	Simple_repeat	1	41	(0)	1546663
997	13.0	0.7	0.0	chr17	1242498	1242635	(82014806)	C	AluJr	SINE/Alu	(173)	139	1	1546664
2255	9.5	0.0	0.0	chr17	1267778	1268071	(81989370)	+	AluSx1	SINE/Alu	1	294	(18)	1546737
13	0.0	14.3	0.0	chr17	1268404	1268431	(81989010)	+	(CCCG)n	Simple_repeat	1	32	(0)	1546738
2376	9.8	0.3	0.0	chr17	1321518	1321822	(81935619)	+	AluSx1	SINE/Alu	1	306	(6)	1546844
280	20.6	5.5	0.0	chr17	1321850	1321917	(81935524)	C	MER5A	DNA/hAT-Charlie	(1)	188	117	1546845
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
219	36.9	2.3	6.0	chr17	1493979	1494126	(81763315)	+	MIR3	SINE/MIR	50	183	(79)	1547245
1790	10.6	0.0	0.0	chr17	1566327	1566562	(81690879)	+	AluSx	SINE/Alu	1	236	(76)	1547368
59	32.0	2.8	2.1	chr17	1566668	1566950	(81690491)	+	(TC)n	Simple_repeat	1	291	(0)	1547369
276	7.5	0.0	0.0	chr17	1637282	1637321	(81620120)	+	MIR3	SINE/MIR	102	141	(67)	1547512
63	1.4	4.2	0.0	chr17	1637328	1637398	(81620043)	+	(CTAT)n	Simple_repeat	1	74	(0)	1547513
2379	11.3	0.3	0.0	chr17	1637461	1637770	(81619671)	C	AluSq	SINE/Alu	(1)	312	2	1547514
14	13.4	7.0	2.2	chr17	1724837	1724879	(81532562)	+	(GCCCCA)n	Simple_repeat	1	46	(0)	1547675
879	17.8	0.0	0.0	chr17	2005590	2005724	(81251717)	+	AluJb	SINE/Alu	141	275	(37)	1548280
41	2.6	0.0	0.0	chr17	2005726	2005765	(81251676)	+	(TC)n	Simple_repeat	1	40	(0)	1548281
15	7.7	0.0	3.2	chr17	2005766	2005784	(81251657)	+	(CTTTT)n	Simple_repeat	1	18	(0)	1548282
2297	10.6	0.3	0.3	chr17	2005785	2006095	(81251346)	C	AluSc8	SINE/Alu	(0)	311	1	1548283
12	23.9	6.0	0.0	chr17	2023849	2023898	(81233543)	+	(GCCGCA)n	Simple_repeat	1	53	(0)	1548314
16	11.9	0.0	7.1	chr17	2049889	2049930	(81207511)	+	(CGCGG)n	Simple_repeat	1	42	(0)	1548358
13	29.8	0.0	0.0	chr17	2392861	2392905	(80864536)	+	G-rich	Low_complexity	1	45	(0)	1549013
14	10.7	3.1	3.0	chr17	2400771	2400802	(80856639)	+	(CAGG)n	Simple_repeat	1	33	(0)	1549023
421	21.7	11.7	1.4	chr17	2484255	2484267	(80773174)	+	Charlie10b	DNA/hAT-Charlie	3	241	(1)	1549204
320	23.9	21.8	1.7	chr17	2484268	2484446	(80772995)	C	Charlie10a	DNA/hAT-Charlie	(54)	226	2	1549205
2181	11.8	0.3	0.0	chr17	2484496	2484791	(80772650)	C	AluSq2	SINE/Alu	(14)	299	3	1549206
3187	12.7	4.5	1.8	chr17	2484986	2485499	(80771942)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1549207
30	0.0	0.0	0.0	chr17	2593591	2593618	(80663823)	+	(GGC)n	Simple_repeat	1	28	(0)	1549531
14	7.8	3.5	3.3	chr17	2593667	2593695	(80663746)	+	(GCG)n	Simple_repeat	1	30	(0)	1549532
1846	9.3	0.4	0.0	chr17	2664408	2664643	(80592798)	C	AluSg	SINE/Alu	(14)	296	60	1549694
38	2.8	0.0	0.0	chr17	2664666	2664702	(80592739)	+	(CT)n	Simple_repeat	1	37	(0)	1549695
312	20.8	0.0	0.0	chr17	2664711	2664763	(80592678)	+	Tigger4	DNA/TcMar-Tigger	2679	2731	(0)	1549696
2459	6.0	0.7	0.7	chr17	4143245	4143544	(79113897)	+	AluSq	SINE/Alu	1	300	(13)	1552423
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
230	29.5	4.6	6.3	chr17	4555693	4555994	(78701447)	C	L2b	LINE/L2	(0)	3387	3099	1553297
14	12.8	2.6	5.1	chr17	4949608	4949645	(78307796)	+	G-rich	Low_complexity	1	39	(0)	1554114
2119	13.0	0.0	0.0	chr17	5158285	5158569	(78098872)	+	AluSz6	SINE/Alu	1	285	(27)	1554524
100	4.0	0.0	0.0	chr17	5158570	5158672	(78098769)	+	(AG)n	Simple_repeat	1	103	(0)	1554525
1337	25.3	14.3	8.9	chr17	5158673	5158879	(78098562)	C	L2	LINE/L2	(1238)	2181	1929	1554522
7761	20.5	6.0	2.3	chr17	5202311	5202708	(78054733)	+	MLT1A0-int	LTR/ERVL-MaLR	116	519	(1216)	1554607
37	5.1	0.0	0.0	chr17	5202715	5202755	(78054686)	+	(TC)n	Simple_repeat	1	41	(0)	1554608
2204	10.8	0.3	0.3	chr17	5202756	5203045	(78054396)	C	AluSq	SINE/Alu	(22)	291	1	1554609
232	3.6	0.0	0.0	chr17	5249801	5249828	(78007613)	+	L1MB3	LINE/L1	5446	5473	(698)	1554732
22	3.9	0.0	0.0	chr17	5249830	5249856	(78007585)	+	(AC)n	Simple_repeat	1	27	(0)	1554733
47	6.6	1.6	0.0	chr17	5249856	5249919	(78007522)	+	(AG)n	Simple_repeat	1	65	(0)	1554734
2439	15.4	1.9	4.7	chr17	5249925	5250192	(78007249)	+	L1MB3	LINE/L1	5527	5789	(394)	1554732
14	0.0	0.0	0.0	chr17	5282377	5282394	(77975047)	+	(GGC)n	Simple_repeat	1	18	(0)	1554825
11	18.8	8.0	1.9	chr17	5438851	5438900	(77818541)	+	(GCAGGC)n	Simple_repeat	1	54	(0)	1555141
16	5.2	0.0	0.0	chr17	5655790	5655809	(77601632)	+	(GT)n	Simple_repeat	1	20	(0)	1555538
53	2.0	0.0	0.0	chr17	5655810	5655859	(77601582)	+	(GA)n	Simple_repeat	1	50	(0)	1555539
65	0.0	0.0	0.0	chr17	5714048	5714102	(77543339)	+	(TC)n	Simple_repeat	1	55	(0)	1555667
406	24.5	15.9	0.0	chr17	5714103	5714208	(77543233)	C	MIR	SINE/MIR	(123)	139	14	1555665
20	18.4	0.0	0.0	chr17	6131868	6131910	(77125531)	+	(CTCTCT)n	Simple_repeat	1	43	(0)	1556451
127	17.9	0.4	0.0	chr17	6452944	6453177	(76804264)	+	(CTCT)n	Simple_repeat	1	235	(0)	1557121
56	0.0	1.7	1.7	chr17	6481725	6481782	(76775659)	+	(TAGA)n	Simple_repeat	1	59	(0)	1557167
31	7.5	0.0	0.0	chr17	6481783	6481825	(76775616)	+	(ATGG)n	Simple_repeat	1	43	(0)	1557168
55	0.0	0.0	0.0	chr17	6481854	6481900	(76775541)	+	(AG)n	Simple_repeat	1	47	(0)	1557169
3065	18.5	11.2	4.8	chr17	6481901	6481985	(76775456)	+	MER21A	LTR/ERVL	13	133	(798)	1557170
104	3.0	0.0	0.0	chr17	6481986	6482087	(76775354)	+	(CT)n	Simple_repeat	1	102	(0)	1557171
3065	18.5	11.2	4.8	chr17	6482088	6482840	(76774601)	+	MER21A	LTR/ERVL	134	911	(20)	1557170
1851	14.2	0.3	4.8	chr17	6659421	6659729	(76597712)	+	AluJb	SINE/Alu	1	295	(17)	1557473
560	33.3	6.2	2.8	chr17	6659730	6659795	(76597646)	+	MIRb	SINE/MIR	193	260	(8)	1557472
59	0.0	1.9	0.0	chr17	6659796	6659849	(76597592)	+	(TC)n	Simple_repeat	1	55	(0)	1557474
1520	11.2	3.2	1.9	chr17	6941231	6941577	(76315864)	+	LTR46	LTR/ERV1	1	404	(56)	1557934
50	2.2	0.0	0.0	chr17	6941582	6941628	(76315813)	+	(TC)n	Simple_repeat	1	47	(0)	1557935
2425	8.8	0.3	0.0	chr17	6941629	6941934	(76315507)	C	AluSp	SINE/Alu	(6)	307	1	1557936
13	23.3	3.9	1.9	chr17	7479350	7479401	(75778040)	+	G-rich	Low_complexity	1	54	(0)	1558907
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
11	22.0	2.2	4.3	chr17	7573782	7573827	(75683614)	+	(GCGAGG)n	Simple_repeat	1	47	(0)	1559097
2179	10.4	0.3	0.0	chr17	7823013	7823310	(75434131)	+	AluSq2	SINE/Alu	1	299	(14)	1559600
30	12.9	2.0	0.0	chr17	7823331	7823381	(75434060)	+	(GA)n	Simple_repeat	1	52	(0)	1559601
16	13.5	0.0	8.3	chr17	7887728	7887775	(75369666)	+	(CTCCGCC)n	Simple_repeat	1	48	(0)	1559705
15	12.8	2.8	2.7	chr17	7916266	7916301	(75341140)	+	G-rich	Low_complexity	1	37	(0)	1559740
522	26.1	4.8	2.5	chr17	8021205	8021365	(75236076)	+	MLT1K	LTR/ERVL-MaLR	392	556	(39)	1559951
37	3.8	1.7	4.9	chr17	8021366	8021425	(75236016)	+	(TTCT)n	Simple_repeat	1	61	(0)	1559952
31	0.0	0.0	0.0	chr17	8021427	8021453	(75235988)	+	(TC)n	Simple_repeat	1	27	(0)	1559953
1795	15.1	5.4	0.0	chr17	8021484	8021762	(75235679)	+	AluJb	SINE/Alu	1	295	(17)	1559954
30	3.5	0.0	0.0	chr17	8055046	8055075	(75202366)	+	(AG)n	Simple_repeat	1	30	(0)	1560023
848	26.5	8.6	2.6	chr17	8055134	8055224	(75202217)	+	LTR37B	LTR/ERV1	1	97	(371)	1560024
707	2.4	0.0	0.0	chr17	8120314	8120395	(75137046)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	1560130
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
691	0.0	0.0	0.0	chr17	8139452	8139525	(75117916)	C	tRNA-Thr-ACY	tRNA	(3)	74	1	1560172
15	18.9	0.0	2.6	chr17	8160882	8160920	(75096521)	+	GA-rich	Low_complexity	1	39	(0)	1560197
313	27.6	14.6	1.3	chr17	8160921	8161074	(75096367)	+	MIR3	SINE/MIR	19	196	(12)	1560198
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
678	0.0	0.0	0.0	chr17	8187593	8187666	(75069775)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1560266
15	31.6	0.0	3.0	chr17	8189693	8189758	(75067683)	+	(CCT)n	Simple_repeat	1	66	(0)	1560268
347	25.4	8.3	2.4	chr17	8220642	8220761	(75036680)	C	L1PB4	LINE/L1	(0)	6166	6045	1560356
650	1.4	0.0	0.0	chr17	8220869	8220940	(75036501)	C	tRNA-Trp-TGG	tRNA	(3)	72	1	1560357
2464	6.0	2.3	0.0	chr17	8295915	8296215	(74961226)	C	AluY	SINE/Alu	(3)	308	1	1560495
18	10.8	3.3	0.0	chr17	8827695	8827724	(74429717)	+	(GT)n	Simple_repeat	1	31	(0)	1561545
84	0.0	1.3	0.0	chr17	8827743	8827817	(74429624)	+	(GA)n	Simple_repeat	1	76	(0)	1561546
45	10.3	1.4	0.0	chr17	9105645	9105717	(74151724)	+	(TCTCTC)n	Simple_repeat	1	74	(0)	1562077
45	2.2	0.0	0.0	chr17	9204177	9204222	(74053219)	+	(TTCC)n	Simple_repeat	1	46	(0)	1562247
2019	13.4	1.3	0.7	chr17	9204223	9204246	(74053195)	C	AluSx1	SINE/Alu	(0)	312	289	1562248
50	4.9	3.2	0.0	chr17	9204247	9204309	(74053132)	+	(TC)n	Simple_repeat	1	65	(0)	1562249
2019	13.4	1.3	0.7	chr17	9204310	9204582	(74052859)	C	AluSx1	SINE/Alu	(24)	288	13	1562248
30	0.0	0.0	0.0	chr17	9529248	9529273	(73728168)	+	(AG)n	Simple_repeat	1	26	(0)	1562883
16	38.9	0.9	2.7	chr17	9529302	9529410	(73728031)	+	(TATA)n	Simple_repeat	1	110	(0)	1562884
2177	10.1	0.0	0.0	chr17	9597523	9597799	(73659642)	+	AluSc	SINE/Alu	1	277	(32)	1563020
53	13.8	1.1	0.0	chr17	9597800	9597890	(73659551)	+	(AGAG)n	Simple_repeat	1	92	(0)	1563021
247	16.7	6.7	0.0	chr17	9609853	9609894	(73647547)	+	MER5A	DNA/hAT-Charlie	143	187	(2)	1563048
41	6.0	0.0	0.0	chr17	9609991	9610042	(73647399)	+	(GA)n	Simple_repeat	1	52	(0)	1563049
36	10.2	11.1	0.9	chr17	9648825	9648903	(73608538)	+	(TCTTTC)n	Simple_repeat	1	87	(0)	1563119
39	9.6	0.0	0.0	chr17	9648904	9648959	(73608482)	+	(TC)n	Simple_repeat	1	56	(0)	1563120
36	10.2	11.1	0.9	chr17	9648960	9648978	(73608463)	+	(TCTTTC)n	Simple_repeat	4	24	(0)	1563121
727	22.9	0.0	0.0	chr17	9648982	9649112	(73608329)	C	AluJo	SINE/Alu	(3)	309	179	1563122
104	28.7	4.0	1.0	chr17	10755604	10755974	(72501467)	+	(CTCTCC)n	Simple_repeat	1	386	(0)	1565209
222	20.0	0.0	0.0	chr17	11997717	11997761	(71259680)	C	MIRb	SINE/MIR	(14)	254	210	1567386
22	0.0	3.7	0.0	chr17	11998045	11998071	(71259370)	+	(TC)n	Simple_repeat	1	28	(0)	1567387
12	12.0	0.0	6.5	chr17	11998083	11998113	(71259328)	+	(TCCCT)n	Simple_repeat	1	31	(0)	1567388
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
17	19.8	1.7	6.6	chr17	12789616	12789675	(70467766)	+	(GCG)n	Simple_repeat	1	61	(0)	1568664
64	0.0	1.7	0.0	chr17	12903084	12903141	(70354300)	+	(GA)n	Simple_repeat	1	59	(0)	1568864
42	2.1	0.0	0.0	chr17	12903142	12903189	(70354252)	+	(TG)n	Simple_repeat	1	48	(0)	1568865
30	41.6	3.3	3.9	chr17	13025634	13026031	(70231410)	+	(TCCCCCT)n	Simple_repeat	1	411	(0)	1569065
152	26.8	2.9	1.1	chr17	13199480	13199932	(70057509)	+	(TTTC)n	Simple_repeat	1	466	(0)	1569385
1655	24.8	4.5	1.1	chr17	13478161	13478608	(69778833)	+	MLT1C	LTR/ERVL-MaLR	1	464	(3)	1569844
29	8.5	3.7	3.6	chr17	13478720	13478773	(69778668)	+	GA-rich	Low_complexity	1	56	(0)	1569845
16	8.2	0.0	0.0	chr17	13601837	13601862	(69655579)	+	(GGCTG)n	Simple_repeat	1	26	(0)	1570038
1929	15.0	0.7	2.4	chr17	14045991	14046277	(69211164)	+	AluJb	SINE/Alu	1	282	(30)	1570812
23	0.0	0.0	0.0	chr17	14046278	14046302	(69211139)	+	(TC)n	Simple_repeat	1	25	(0)	1570813
49	0.0	0.0	0.0	chr17	14046303	14046344	(69211097)	+	(CA)n	Simple_repeat	1	42	(0)	1570814
44	0.0	0.0	0.0	chr17	14291412	14291449	(68965992)	+	(GA)n	Simple_repeat	1	38	(0)	1571184
2043	11.8	8.5	1.7	chr17	14291450	14291801	(68965640)	+	THE1D	LTR/ERVL-MaLR	4	381	(0)	1571185
16	24.1	1.6	4.6	chr17	14302655	14302718	(68954723)	+	G-rich	Low_complexity	1	65	(0)	1571201
63	0.0	3.3	0.0	chr17	15214518	15214578	(68042863)	+	(AG)n	Simple_repeat	1	63	(0)	1572700
1107	9.9	0.7	0.0	chr17	15444573	15444713	(67812728)	+	AluSz6	SINE/Alu	3	144	(168)	1573057
37	0.0	0.0	0.0	chr17	15444715	15444746	(67812695)	+	(AG)n	Simple_repeat	1	32	(0)	1573058
65	5.3	7.3	1.5	chr17	15502710	15502832	(67754609)	+	(TC)n	Simple_repeat	1	132	(0)	1573165
334	15.7	0.0	0.0	chr17	15684352	15684402	(67573039)	+	AluYb8	SINE/Alu	258	308	(10)	1573497
2460	7.4	0.7	1.4	chr17	15684442	15684738	(67572703)	C	AluSx1	SINE/Alu	(17)	295	1	1573498
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
2154	10.1	0.7	0.0	chr17	16257785	16258061	(66999380)	+	AluSq	SINE/Alu	3	281	(32)	1574539
89	3.5	0.0	0.0	chr17	16258070	16258158	(66999283)	+	(AG)n	Simple_repeat	1	89	(0)	1574540
2399	9.2	0.0	0.0	chr17	16258175	16258477	(66998964)	C	AluSx4	SINE/Alu	(7)	303	1	1574541
1106	14.0	0.0	0.0	chr17	16386580	16386743	(66870698)	+	AluJr	SINE/Alu	139	302	(10)	1574869
31	13.4	0.0	0.0	chr17	16989572	16989620	(66267821)	+	(AG)n	Simple_repeat	1	49	(0)	1575887
24	0.0	6.2	0.0	chr17	17386147	17386178	(65871263)	+	(GA)n	Simple_repeat	1	34	(0)	1576573
2111	8.3	0.4	0.0	chr17	17655490	17655765	(65601676)	+	AluSp	SINE/Alu	1	277	(36)	1577074
81	16.1	1.9	0.6	chr17	17655766	17655922	(65601519)	+	GA-rich	Low_complexity	1	160	(0)	1577075
278	33.8	7.5	3.5	chr17	17685258	17685606	(65571835)	C	L2b	LINE/L2	(12)	3363	2939	1577157
349	32.3	13.2	3.4	chr17	17685600	17686175	(65571266)	+	L2b	LINE/L2	2713	3364	(11)	1577158
48	6.8	0.0	0.0	chr17	17742416	17742477	(65514964)	+	(TGAA)n	Simple_repeat	1	62	(0)	1577260
15	0.0	0.0	0.0	chr17	17742624	17742640	(65514801)	+	(AG)n	Simple_repeat	1	17	(0)	1577261
21	31.9	1.5	0.0	chr17	17783970	17784035	(65473406)	+	(CT)n	Simple_repeat	1	67	(0)	1577348
210	32.3	0.0	2.9	chr17	17784059	17784160	(65473281)	C	UCON71_Crp	Unknown	(0)	277	179	1577349
63	1.8	0.0	0.0	chr17	17800171	17800228	(65457213)	+	(TC)n	Simple_repeat	1	58	(0)	1577368
1875	12.4	4.8	0.7	chr17	17833701	17833982	(65423459)	+	AluSx	SINE/Alu	1	294	(18)	1577437
19	0.0	4.2	0.0	chr17	17834028	17834051	(65423390)	+	(AG)n	Simple_repeat	1	25	(0)	1577438
293	26.7	4.8	1.6	chr17	17834069	17834103	(65423338)	+	L1ME4a	LINE/L1	5999	6033	(91)	1577439
1781	16.4	1.7	0.3	chr17	17834104	17834389	(65423052)	C	AluJr	SINE/Alu	(22)	290	1	1577440
14	19.5	0.0	2.7	chr17	17836882	17836918	(65420523)	+	(CGC)n	Simple_repeat	1	37	(0)	1577445
614	25.2	13.1	1.8	chr17	17922534	17922755	(65334686)	+	MIR	SINE/MIR	1	251	(11)	1577578
2844	19.2	10.7	1.8	chr17	17958670	17959343	(65298098)	+	MER21B	LTR/ERVL	1	741	(127)	1577660
342	27.8	16.9	2.2	chr17	18362898	18363066	(64894375)	+	MIR	SINE/MIR	18	222	(46)	1578435
2208	7.8	1.4	1.0	chr17	18697575	18697867	(64559574)	+	AluSx1	SINE/Alu	1	294	(18)	1578955
319	15.7	0.0	0.0	chr17	18697907	18697957	(64559484)	C	AluYb8	SINE/Alu	(10)	308	258	1578956
2204	11.7	1.6	0.0	chr17	18747279	18747586	(64509855)	+	AluSq2	SINE/Alu	1	313	(0)	1579050
12	11.4	10.9	5.6	chr17	18781074	18781137	(64476304)	+	(CTCCGC)n	Simple_repeat	1	71	(0)	1579119
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
1979	1.4	0.0	0.0	chr17	19112420	19112636	(64144805)	C	U3	snRNA	(0)	217	1	1579881
2500	4.2	0.0	0.3	chr17	19489058	19489345	(63768096)	+	AluY	SINE/Alu	1	287	(24)	1580700
69	4.3	0.0	0.0	chr17	19489355	19489426	(63768015)	+	(AG)n	Simple_repeat	1	72	(0)	1580701
436	28.6	8.1	2.2	chr17	19489431	19489662	(63767779)	+	L1MEh	LINE/L1	255	501	(1734)	1580702
13	12.1	0.0	3.5	chr17	20009436	20009464	(63247977)	+	(CCGC)n	Simple_repeat	1	29	(0)	1581768
1569	18.8	8.2	3.8	chr17	20082599	20082852	(63174589)	C	MLT1B	LTR/ERVL-MaLR	(111)	279	2	1581908
247	26.1	7.1	7.8	chr17	20082853	20082886	(63174555)	+	L2c	LINE/L2	3117	3145	(242)	1581907
53	0.0	0.0	0.0	chr17	20082958	20083005	(63174436)	+	(GTTC)n	Simple_repeat	1	48	(0)	1581910
206	27.5	8.0	0.0	chr17	20083129	20083197	(63174244)	C	L2a	LINE/L2	(1)	3425	3351	1581911
1688	17.6	11.2	0.3	chr17	20093082	20093406	(63164035)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1581926
379	29.7	8.1	4.9	chr17	20093407	20093470	(63163971)	+	MIRb	SINE/MIR	144	227	(35)	1581925
18	23.8	2.0	0.0	chr17	20905407	20905457	(62351984)	+	(TTTC)n	Simple_repeat	1	52	(0)	1583309
26	22.4	0.0	2.9	chr17	20905440	20905508	(62351933)	+	(TCCC)n	Simple_repeat	1	69	(0)	1583310
313	18.3	6.6	1.4	chr17	20905509	20905520	(62351921)	C	AluJb	SINE/Alu	(3)	299	288	1583311
60	4.8	0.0	0.0	chr17	20905521	20905585	(62351856)	+	(TC)n	Simple_repeat	1	65	(0)	1583312
313	18.3	6.6	1.4	chr17	20905586	20905644	(62351797)	C	AluJb	SINE/Alu	(15)	287	224	1583311
35	34.1	2.8	4.7	chr17	21042336	21042586	(62214855)	+	G-rich	Low_complexity	1	258	(0)	1583514
15	30.1	5.8	2.8	chr17	21042490	21042592	(62214849)	+	GA-rich	Low_complexity	1	109	(0)	1583515
17	22.4	6.6	2.5	chr17	21042840	21042924	(62214517)	+	(CGG)n	Simple_repeat	1	88	(0)	1583516
15	19.1	2.6	2.6	chr17	21280325	21280362	(61977079)	+	(TG)n	Simple_repeat	1	39	(0)	1583995
29	0.0	0.0	0.0	chr17	21284781	21284807	(61972634)	+	(CGC)n	Simple_repeat	1	27	(0)	1584007
53	0.0	0.0	0.0	chr17	21657668	21657712	(61599729)	+	(AG)n	Simple_repeat	1	45	(0)	1584603
18	6.8	3.2	0.0	chr17	27456279	27456309	(55801132)	+	(GGGAG)n	Simple_repeat	1	32	(0)	1586829
1265	27.0	7.0	3.0	chr17	28008849	28009341	(55248100)	C	Tigger11a	DNA/TcMar-Tigger	(164)	571	58	1587893
39	2.7	0.0	0.0	chr17	28009356	28009393	(55248048)	+	(GT)n	Simple_repeat	1	38	(0)	1587894
19	11.6	0.0	0.0	chr17	28009394	28009422	(55248019)	+	(AT)n	Simple_repeat	1	29	(0)	1587895
32	9.5	0.0	0.0	chr17	28009422	28009466	(55247975)	+	(AG)n	Simple_repeat	1	45	(0)	1587896
1970	13.0	0.0	3.8	chr17	28009467	28009759	(55247682)	C	AluSz	SINE/Alu	(30)	282	1	1587897
52	4.8	1.5	1.5	chr17	28523767	28523832	(54733609)	+	(TC)n	Simple_repeat	1	67	(0)	1588849
40	0.0	0.0	0.0	chr17	28540746	28540779	(54716662)	+	(TG)n	Simple_repeat	1	34	(0)	1588875
29	0.0	0.0	0.0	chr17	28540780	28540811	(54716630)	+	(AG)n	Simple_repeat	1	32	(0)	1588876
1379	19.9	10.3	2.2	chr17	28540949	28541224	(54716217)	C	AluJo	SINE/Alu	(11)	301	1	1588877
14	21.5	4.0	1.9	chr17	28552640	28552689	(54704752)	+	(CCCCGC)n	Simple_repeat	1	52	(0)	1588901
13	15.2	0.0	3.2	chr17	28744082	28744112	(54513329)	+	(CCCG)n	Simple_repeat	1	31	(0)	1589232
17	25.1	0.0	4.8	chr17	28897639	28897700	(54359741)	+	(CGCC)n	Simple_repeat	1	62	(0)	1589579
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
275	33.6	0.0	0.9	chr17	29042850	29042963	(54214478)	+	Eulor8	DNA/TcMar?	381	493	(69)	1589828
17	13.9	0.0	6.7	chr17	29180394	29180438	(54077003)	+	(AGCGC)n	Simple_repeat	1	45	(0)	1590037
18	10.5	0.0	0.0	chr17	29294512	29294543	(53962898)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1590289
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
429	21.0	17.0	0.5	chr17	29411739	29411925	(53845516)	C	L1ME3	LINE/L1	(1)	6161	5938	1590606
35	2.8	0.0	0.0	chr17	29411990	29412026	(53845415)	+	(TTCC)n	Simple_repeat	1	37	(0)	1590607
2280	12.5	0.0	0.0	chr17	29412038	29412342	(53845099)	C	AluSz	SINE/Alu	(7)	305	1	1590608
13	17.0	3.0	0.0	chr17	29589693	29589725	(53667716)	+	(CCCCG)n	Simple_repeat	1	34	(0)	1590971
13	25.9	3.2	3.1	chr17	29589778	29589840	(53667601)	+	(GGCCGC)n	Simple_repeat	1	65	(0)	1590972
217	29.7	0.0	12.9	chr17	30171869	30171934	(53085507)	C	MIR3	SINE/MIR	(8)	200	139	1592089
46	0.0	0.0	0.0	chr17	30171935	30171973	(53085468)	+	(CA)n	Simple_repeat	1	39	(0)	1592090
46	0.0	0.0	0.0	chr17	30171977	30172015	(53085426)	+	(CT)n	Simple_repeat	1	39	(0)	1592091
217	29.7	0.0	12.9	chr17	30172016	30172060	(53085381)	C	MIR3	SINE/MIR	(70)	138	100	1592089
367	32.2	14.6	1.0	chr17	30377112	30377418	(52880023)	+	L2	LINE/L2	2454	2809	(610)	1592474
33	12.7	0.0	0.0	chr17	30711029	30711088	(52546353)	+	(CT)n	Simple_repeat	1	60	(0)	1593101
2194	8.8	1.3	0.3	chr17	30825490	30825785	(52431656)	+	AluSq	SINE/Alu	2	300	(13)	1593364
1268	16.9	13.0	2.2	chr17	30826000	30826266	(52431175)	+	AluJo	SINE/Alu	1	300	(12)	1593365
1722	17.5	1.7	1.1	chr17	31004022	31004307	(52253134)	+	AluJb	SINE/Alu	2	289	(23)	1593807
44	20.1	4.0	0.0	chr17	31004308	31004408	(52253033)	+	GA-rich	Low_complexity	1	105	(0)	1593808
25	7.5	2.3	2.2	chr17	31004379	31004422	(52253019)	+	(AAAAG)n	Simple_repeat	1	45	(0)	1593809
593	13.1	0.0	0.0	chr17	31004427	31004510	(52252931)	C	MLT1A0	LTR/ERVL-MaLR	(54)	354	271	1593810
2328	10.6	0.0	0.0	chr17	31062731	31063031	(52194410)	+	AluSx	SINE/Alu	1	301	(11)	1593924
54	2.0	0.0	0.0	chr17	31063152	31063202	(52194239)	+	(TC)n	Simple_repeat	1	51	(0)	1593925
333	17.1	0.0	0.0	chr17	31063219	31063285	(52194156)	C	L1MA9	LINE/L1	(166)	6125	6059	1593926
23	18.9	3.5	5.6	chr17	31095059	31095145	(52162296)	+	(CCCCCT)n	Simple_repeat	1	90	(0)	1593994
1631	13.3	8.5	1.9	chr17	31172067	31172329	(52085112)	+	AluJr	SINE/Alu	1	282	(30)	1594147
38	5.6	3.6	0.0	chr17	31172332	31172387	(52085054)	+	(TCTGTCTC)n	Simple_repeat	1	58	(0)	1594148
586	30.2	5.9	4.7	chr17	31172492	31172727	(52084714)	C	MIRb	SINE/MIR	(14)	254	16	1594149
17	13.7	0.0	0.0	chr17	31549981	31550012	(51707429)	+	(CGGGGC)n	Simple_repeat	1	32	(0)	1594798
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
2246	24.5	10.9	10.7	chr17	31979129	31980011	(51277430)	C	L1MC4	LINE/L1	(18)	8024	7081	1595786
31	0.0	0.0	0.0	chr17	31980012	31980038	(51277403)	+	(AG)n	Simple_repeat	1	27	(0)	1595788
892	19.2	0.0	0.0	chr17	31980045	31980174	(51277267)	+	FLAM_C	SINE/Alu	4	133	(10)	1595789
2246	24.5	10.9	10.7	chr17	31980175	31980429	(51277012)	C	L1MC4	LINE/L1	(962)	7080	6865	1595786
67	0.0	0.0	0.0	chr17	32062906	32062962	(51194479)	+	(GA)n	Simple_repeat	1	57	(0)	1595960
16	0.0	0.0	0.0	chr17	32299047	32299063	(50958378)	+	(T)n	Simple_repeat	1	17	(0)	1596496
18	19.1	3.7	7.1	chr17	32486611	32486692	(50770749)	+	(GGCG)n	Simple_repeat	1	85	(0)	1596915
3399	10.3	15.6	0.6	chr17	32917098	32917635	(50339806)	+	MER51A	LTR/ERV1	1	634	(0)	1597634
18030	12.2	5.0	1.8	chr17	32917636	32917711	(50339730)	+	MER51-int	LTR/ERV1	1	88	(7728)	1597634
42	4.6	0.0	0.0	chr17	32917712	32917756	(50339685)	+	(TC)n	Simple_repeat	1	45	(0)	1597635
18030	12.2	5.0	1.8	chr17	32917757	32920129	(50337312)	+	MER51-int	LTR/ERV1	89	2513	(5303)	1597634
1863	18.0	0.3	0.0	chr17	32959778	32960071	(50297370)	C	AluJb	SINE/Alu	(15)	297	3	1597703
48	4.2	0.0	0.0	chr17	32960072	32960121	(50297320)	+	(CT)n	Simple_repeat	1	50	(0)	1597704
1122	18.6	0.5	2.7	chr17	32960123	32960343	(50297098)	C	AluJr	SINE/Alu	(13)	299	84	1597705
21	7.6	0.0	0.0	chr17	34613147	34613174	(48644267)	+	(CT)n	Simple_repeat	1	28	(0)	1600741
39	2.7	0.0	0.0	chr17	34613175	34613212	(48644229)	+	(AC)n	Simple_repeat	1	38	(0)	1600742
36	13.6	0.0	0.0	chr17	34835404	34835460	(48421981)	+	(CT)n	Simple_repeat	1	57	(0)	1601166
25	21.1	5.3	0.0	chr17	34980634	34980709	(48276732)	+	(CGCGG)n	Simple_repeat	1	80	(0)	1601461
702	25.6	10.6	0.5	chr17	34982003	34982214	(48275227)	C	MIR	SINE/MIR	(0)	262	27	1601464
17	26.4	1.9	0.0	chr17	35089065	35089118	(48168323)	+	(CGC)n	Simple_repeat	1	55	(0)	1601648
691	24.5	6.4	1.6	chr17	35179983	35180250	(48077191)	C	MLT1K	LTR/ERVL-MaLR	(7)	603	324	1601876
42	0.0	0.0	0.0	chr17	35180254	35180289	(48077152)	+	(GA)n	Simple_repeat	1	36	(0)	1601877
48	0.0	4.2	0.0	chr17	35239987	35240034	(48017407)	+	(GA)n	Simple_repeat	1	50	(0)	1601978
15	28.0	3.3	0.0	chr17	35373371	35373430	(47884011)	+	(CCACT)n	Simple_repeat	1	62	(0)	1602149
48	0.0	0.0	0.0	chr17	35583515	35583555	(47673886)	+	(TC)n	Simple_repeat	1	41	(0)	1602438
954	17.9	1.3	0.6	chr17	35583556	35583705	(47673736)	C	FRAM	SINE/Alu	(21)	155	4	1602439
470	23.0	6.9	4.5	chr17	35804861	35805015	(47452426)	+	L2	LINE/L2	2756	2914	(505)	1602844
520	21.8	10.3	7.7	chr17	35805020	35805392	(47452049)	C	LTR33A_	LTR/ERVL	(89)	442	7	1602845
210	24.7	7.7	0.0	chr17	36148808	36148934	(47108507)	C	MIR3	SINE/MIR	(10)	252	112	1603463
471	29.2	10.1	1.7	chr17	36149225	36149405	(47108036)	C	MIRb	SINE/MIR	(70)	198	1	1603464
39	2.7	0.0	0.0	chr17	36465924	36465961	(46791480)	+	(AG)n	Simple_repeat	1	38	(0)	1604003
458	29.1	0.6	4.1	chr17	36465975	36466146	(46791295)	+	MamRep137	DNA/TcMar-Tigger	56	221	(289)	1604004
2334	10.4	0.0	0.0	chr17	36604858	36605154	(46652287)	+	AluSq2	SINE/Alu	1	297	(16)	1604242
1935	25.5	17.6	11.6	chr17	36605155	36605172	(46652269)	+	L2a	LINE/L2	2259	2259	(1160)	1604240
1614	15.3	1.4	7.6	chr17	36605173	36605473	(46651968)	C	AluJr	SINE/Alu	(30)	282	1	1604243
678	28.9	10.9	3.0	chr17	36628676	36628910	(46628531)	C	MIRb	SINE/MIR	(4)	264	9	1604291
37	6.1	2.0	0.0	chr17	36628921	36628971	(46628470)	+	(GA)n	Simple_repeat	1	52	(0)	1604292
236	33.3	13.7	0.0	chr17	36629024	36629200	(46628241)	+	MamRep4096	DNA/hAT-Tip100	3	207	(219)	1604293
72	8.8	2.8	0.0	chr17	36792497	36792604	(46464837)	+	(AG)n	Simple_repeat	1	111	(0)	1604651
30	3.5	0.0	0.0	chr17	36793677	36793706	(46463735)	+	(CT)n	Simple_repeat	1	30	(0)	1604653
795	16.0	0.0	0.0	chr17	36793707	36793831	(46463610)	C	FLAM_C	SINE/Alu	(18)	125	1	1604654
2035	16.4	0.3	0.6	chr17	36956695	36957006	(46300435)	+	AluSq2	SINE/Alu	1	311	(2)	1604993
319	23.6	3.1	1.1	chr17	36957051	36957144	(46300297)	C	Tigger10	DNA/TcMar-Tigger	(20)	1824	1729	1604994
1911	17.4	0.0	0.4	chr17	37001037	37001312	(46256129)	+	AluJo	SINE/Alu	1	275	(37)	1605077
36	12.3	4.7	0.0	chr17	37001319	37001382	(46256059)	+	GA-rich	Low_complexity	1	67	(0)	1605078
56	0.0	0.0	0.0	chr17	37001406	37001455	(46255986)	+	(AGGA)n	Simple_repeat	1	50	(0)	1605079
6940	15.1	2.8	4.0	chr17	37001473	37001920	(46255521)	+	L1M4	LINE/L1	3770	4241	(1905)	1605076
19	33.4	0.0	0.0	chr17	37110057	37110123	(46147318)	+	A-rich	Low_complexity	1	67	(0)	1605251
12	16.8	2.8	2.7	chr17	37359157	37359192	(45898249)	+	(CCCGCC)n	Simple_repeat	1	37	(0)	1605676
1620	11.8	0.0	20.1	chr17	37580297	37580478	(45676963)	C	AluSx	SINE/Alu	(14)	298	136	1606120
38	0.0	0.0	0.0	chr17	37580479	37580511	(45676930)	+	(GT)n	Simple_repeat	1	33	(0)	1606121
1620	11.8	0.0	20.1	chr17	37580512	37580563	(45676878)	C	AluSx	SINE/Alu	(177)	135	136	1606120
2187	10.0	0.0	0.0	chr17	37580564	37580832	(45676609)	C	AluSx4	SINE/Alu	(41)	269	1	1606122
53	0.0	0.0	0.0	chr17	37716843	37716887	(45540554)	+	(TC)n	Simple_repeat	1	45	(0)	1606391
215	34.1	7.3	3.5	chr17	37716888	37717057	(45540384)	+	MIRb	SINE/MIR	76	252	(16)	1606392
38	4.9	0.0	0.0	chr17	38389907	38389948	(44867493)	+	(AG)n	Simple_repeat	1	42	(0)	1607771
864	19.1	0.0	2.0	chr17	38389949	38390100	(44867341)	C	AluSx	SINE/Alu	(39)	273	125	1607772
42	16.2	3.6	0.0	chr17	38603164	38603247	(44654194)	+	GA-rich	Low_complexity	1	87	(0)	1608159
18	19.6	1.8	3.5	chr17	38747559	38747614	(44509827)	+	G-rich	Low_complexity	1	57	(0)	1608483
24	2.6	2.2	6.5	chr17	38748222	38748266	(44509175)	+	(GGGA)n	Simple_repeat	1	46	(0)	1608484
641	2.7	0.0	0.0	chr17	38867645	38867717	(44389724)	+	tRNA-Cys-TGY	tRNA	1	73	(2)	1608775
17	20.3	0.0	5.4	chr17	38869952	38870007	(44387434)	+	(CGTGCC)n	Simple_repeat	1	56	(0)	1608780
59	9.7	2.0	1.0	chr17	38886082	38886183	(44371258)	+	(CT)n	Simple_repeat	1	104	(0)	1608810
24	18.0	0.0	0.0	chr17	38886281	38886330	(44371111)	+	G-rich	Low_complexity	1	50	(0)	1608811
641	2.7	0.0	0.0	chr17	39153733	39153805	(44103636)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609432
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
224	19.2	1.4	6.4	chr17	39232470	39232547	(44024894)	C	L2c	LINE/L2	(297)	3090	3017	1609586
66	3.1	0.0	0.0	chr17	39315807	39315871	(43941570)	+	(GA)n	Simple_repeat	1	65	(0)	1609776
749	24.2	2.5	0.0	chr17	39315945	39316097	(43941344)	+	AluJr4	SINE/Alu	140	296	(16)	1609777
13	22.7	2.3	2.3	chr17	39401721	39401763	(43855678)	+	(GGC)n	Simple_repeat	1	44	(0)	1610001
1606	17.1	7.4	1.7	chr17	39481316	39481608	(43775833)	C	AluSz6	SINE/Alu	(0)	312	2	1610198
93	1.2	0.0	0.0	chr17	39481634	39481717	(43775724)	+	(CT)n	Simple_repeat	1	84	(0)	1610199
61	3.4	0.0	0.0	chr17	39532088	39532148	(43725293)	+	(CT)n	Simple_repeat	1	61	(0)	1610325
46	2.3	0.0	0.0	chr17	39549989	39550032	(43707409)	+	(TC)n	Simple_repeat	1	44	(0)	1610345
28	0.0	0.0	0.0	chr17	39573626	39573651	(43683790)	+	(CGC)n	Simple_repeat	1	26	(0)	1610387
1893	9.4	3.0	0.4	chr17	39753443	39753698	(43503743)	C	AluSz	SINE/Alu	(11)	301	39	1610714
17	8.8	0.0	0.0	chr17	39800642	39800665	(43456776)	+	(AC)n	Simple_repeat	1	24	(0)	1610789
16	23.6	0.0	0.0	chr17	40069008	40069042	(43188399)	+	(GT)n	Simple_repeat	1	35	(0)	1611299
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
51	19.4	2.6	0.8	chr17	40124316	40124432	(43133009)	+	(TCTC)n	Simple_repeat	1	120	(0)	1611397
29	0.0	0.0	0.0	chr17	40444859	40444883	(42812558)	+	(AG)n	Simple_repeat	1	25	(0)	1612061
38	0.0	0.0	0.0	chr17	40444885	40444926	(42812515)	+	(AC)n	Simple_repeat	1	42	(0)	1612062
64	1.7	0.0	0.0	chr17	40444927	40444985	(42812456)	+	(AG)n	Simple_repeat	1	59	(0)	1612063
14	31.8	2.6	2.5	chr17	40445022	40445099	(42812342)	+	(CTTT)n	Simple_repeat	1	80	(0)	1612064
221	39.2	7.2	2.1	chr17	40827957	40828193	(42429248)	+	L2b	LINE/L2	2563	2812	(607)	1612718
342	26.0	1.5	0.0	chr17	40828333	40828419	(42429022)	+	MIR	SINE/MIR	66	153	(109)	1612719
40	2.6	0.0	0.0	chr17	40953772	40953810	(42303631)	+	(GA)n	Simple_repeat	1	39	(0)	1612915
470	29.1	7.2	2.9	chr17	41513179	41513406	(41744035)	+	MIRc	SINE/MIR	2	232	(36)	1613737
33	5.6	0.0	0.0	chr17	41584034	41584070	(41673371)	+	(TC)n	Simple_repeat	1	37	(0)	1613860
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
1987	15.1	2.0	0.0	chr17	41761789	41762080	(41495361)	+	AluSz6	SINE/Alu	3	300	(12)	1614240
67	1.6	0.0	0.0	chr17	41762116	41762177	(41495264)	+	(AG)n	Simple_repeat	1	62	(0)	1614241
26	0.0	0.0	0.0	chr17	41762178	41762206	(41495235)	+	(TG)n	Simple_repeat	1	29	(0)	1614242
17	26.5	0.0	0.0	chr17	41762207	41762227	(41495214)	+	(TGTT)n	Simple_repeat	1	50	(0)	1614243
768	12.1	0.0	10.0	chr17	41762247	41762386	(41495055)	C	AluJr	SINE/Alu	(186)	126	1	1614244
458	21.0	11.5	1.5	chr17	42024862	42024998	(41232443)	+	MIR3	SINE/MIR	37	185	(23)	1614791
12	19.6	2.9	0.0	chr17	42025212	42025246	(41232195)	+	(TTATAT)n	Simple_repeat	1	36	(0)	1614792
100	7.7	2.6	1.2	chr17	42147028	42147183	(41110258)	+	(GAAA)n	Simple_repeat	1	160	(0)	1615025
2326	8.4	0.0	0.0	chr17	42254816	42255100	(41002341)	+	AluSc	SINE/Alu	6	290	(19)	1615242
13	15.8	2.7	2.6	chr17	42276584	42276620	(40980821)	+	(GGTGCC)n	Simple_repeat	1	38	(0)	1615286
30	7.9	0.0	0.0	chr17	42311089	42311128	(40946313)	+	(AG)n	Simple_repeat	1	40	(0)	1615351
21	23.8	3.9	4.7	chr17	42423106	42423207	(40834234)	+	(GGAGCG)n	Simple_repeat	1	106	(0)	1615601
2118	12.7	0.3	2.5	chr17	42445371	42445685	(40811756)	+	AluSx1	SINE/Alu	3	310	(2)	1615672
278	23.1	7.1	0.0	chr17	42445792	42445856	(40811585)	+	L1MDa	LINE/L1	1530	1599	(5034)	1615655
2646	4.8	0.3	1.0	chr17	42445857	42446196	(40811245)	+	AluY	SINE/Alu	1	311	(0)	1615673
434	30.2	8.0	4.7	chr17	42535586	42536003	(40721438)	+	L2c	LINE/L2	2938	3387	(0)	1615843
197	16.9	7.1	2.6	chr17	42561692	42561760	(40695681)	+	MIR1_Amn	SINE/MIR	121	195	(73)	1615899
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
223	33.0	0.0	0.0	chr17	42566580	42566667	(40690774)	C	L2b	LINE/L2	(40)	3335	3248	1615905
2394	11.6	0.3	0.0	chr17	42626870	42627180	(40630261)	+	AluSx	SINE/Alu	1	312	(0)	1616010
68	14.4	0.0	0.0	chr17	42627181	42627289	(40630152)	+	(GA)n	Simple_repeat	1	109	(0)	1616011
701	22.4	0.0	0.0	chr17	42639820	42639935	(40617506)	+	FLAM_A	SINE/Alu	1	116	(26)	1616051
855	20.6	14.3	0.0	chr17	42639939	42640118	(40617323)	C	AluJr	SINE/Alu	(17)	295	86	1616052
38	21.3	9.5	0.6	chr17	42682577	42682724	(40574717)	+	GA-rich	Low_complexity	1	162	(0)	1616146
15	19.6	0.0	0.0	chr17	42682757	42682791	(40574650)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	1616147
187	33.1	6.1	6.7	chr17	42773138	42773257	(40484184)	+	MIR1_Amn	SINE/MIR	6	118	(90)	1616344
19	28.9	5.4	0.0	chr17	42833431	42833522	(40423919)	+	(GCGA)n	Simple_repeat	1	97	(0)	1616449
37	0.0	0.0	0.0	chr17	42834438	42834469	(40422972)	+	(GA)n	Simple_repeat	1	32	(0)	1616451
20	22.3	3.5	0.0	chr17	43022172	43022228	(40235213)	+	(GGC)n	Simple_repeat	1	59	(0)	1616898
14	7.8	0.0	6.5	chr17	43022419	43022449	(40234992)	+	(GGGCG)n	Simple_repeat	1	31	(0)	1616899
7264	8.2	2.0	11.1	chr17	43166029	43167245	(40090196)	C	Harlequin-int	LTR/ERV1	(5792)	1104	1	1617228
345	13.6	1.3	12.0	chr17	43233260	43233516	(40023925)	+	HERV17-int	LTR/ERV1	705	1038	(4064)	1617363
511	25.3	3.0	1.9	chr17	43332634	43332912	(39924529)	C	HERVK13-int	LTR/ERVK	(7263)	853	675	1617608
421	19.6	23.5	4.0	chr17	43369790	43370040	(39887401)	+	L1MC4	LINE/L1	7608	7911	(131)	1617640
18	13.2	0.0	0.0	chr17	43370073	43370105	(39887336)	+	(AGAG)n	Simple_repeat	1	33	(0)	1617641
16	15.8	2.8	0.0	chr17	43370132	43370167	(39887274)	+	G-rich	Low_complexity	1	37	(0)	1617642
217	33.3	4.0	3.0	chr17	43370171	43370269	(39887172)	+	MIRb	SINE/MIR	1	100	(168)	1617643
236	28.1	4.7	0.0	chr17	43370271	43370352	(39887089)	+	L1MC4	LINE/L1	7957	8042	(0)	1617640
951	16.6	5.1	0.6	chr17	43383393	43383543	(39873898)	+	AluJb	SINE/Alu	136	295	(17)	1617673
58	5.0	0.0	0.0	chr17	43383544	43383606	(39873835)	+	(AG)n	Simple_repeat	1	63	(0)	1617674
951	16.6	5.1	0.6	chr17	43383607	43383623	(39873818)	+	AluJb	SINE/Alu	296	312	(0)	1617673
23	14.0	0.0	0.0	chr17	43383624	43383664	(39873777)	+	(AGAGAA)n	Simple_repeat	1	41	(0)	1617675
71	5.8	0.0	0.0	chr17	43458223	43458312	(39799129)	+	(GA)n	Simple_repeat	1	90	(0)	1617882
364	30.4	17.1	0.9	chr17	43546819	43547021	(39710420)	C	MIRb	SINE/MIR	(0)	262	18	1618072
390	32.5	9.0	2.9	chr17	43633192	43633400	(39624041)	C	MIRc	SINE/MIR	(20)	248	26	1618287
25	3.4	0.0	0.0	chr17	43633458	43633487	(39623954)	+	(GT)n	Simple_repeat	1	30	(0)	1618288
33	0.0	0.0	0.0	chr17	43633488	43633515	(39623926)	+	(GA)n	Simple_repeat	1	28	(0)	1618289
184	30.9	5.5	0.0	chr17	43633544	43633611	(39623830)	C	MIRb	SINE/MIR	(13)	255	184	1618290
239	26.1	6.4	4.3	chr17	43633607	43633698	(39623743)	+	L2c	LINE/L2	3294	3387	(0)	1618291
487	25.4	7.9	5.4	chr17	43671089	43671309	(39586132)	C	MIRc	SINE/MIR	(18)	250	24	1618371
623	28.5	3.5	0.0	chr17	43671387	43671607	(39585834)	C	Tigger14a	DNA/TcMar-Tigger	(34)	290	62	1618372
12	11.1	0.0	8.6	chr17	43720762	43720796	(39536645)	+	(GCCTCC)n	Simple_repeat	1	35	(0)	1618471
21	4.0	0.0	0.0	chr17	43751355	43751380	(39506061)	+	(GT)n	Simple_repeat	1	26	(0)	1618541
43	4.5	0.0	0.0	chr17	43751381	43751426	(39506015)	+	(GA)n	Simple_repeat	1	46	(0)	1618542
246	21.1	0.0	0.0	chr17	43784964	43785015	(39472426)	C	MLT2B3	LTR/ERVL	(0)	554	503	1618597
43	8.8	0.0	0.0	chr17	43785016	43785075	(39472366)	+	(AG)n	Simple_repeat	1	60	(0)	1618598
2019	17.1	1.6	6.4	chr17	43785076	43785166	(39472275)	C	Ricksha_c	DNA/MULE-MuDR	(1203)	845	764	1618599
2224	16.4	7.9	6.5	chr17	43785167	43785424	(39472017)	C	MER66B	LTR/ERV1	(4)	482	206	1618600
16	20.5	4.5	4.3	chr17	44221524	44221590	(39035851)	+	(CCTCCTG)n	Simple_repeat	1	70	(0)	1619468
13	18.9	0.0	0.0	chr17	44363653	44363682	(38893759)	+	(AGC)n	Simple_repeat	1	30	(0)	1619784
24	19.9	4.2	5.0	chr17	44363747	44363841	(38893600)	+	(GCTCCC)n	Simple_repeat	1	99	(0)	1619785
25	22.6	3.5	2.3	chr17	44366758	44366828	(38890613)	+	(TCTT)n	Simple_repeat	1	71	(0)	1619790
2390	9.0	0.7	0.7	chr17	44366829	44367138	(38890303)	C	AluY	SINE/Alu	(1)	310	1	1619791
590	26.8	10.7	3.9	chr17	44426677	44426848	(38830593)	+	L1M7	LINE/L1	1365	1548	(4763)	1619892
42	4.6	0.0	0.0	chr17	44426849	44426893	(38830548)	+	(CT)n	Simple_repeat	1	45	(0)	1619893
590	26.8	10.7	3.9	chr17	44426894	44426980	(38830461)	+	L1M7	LINE/L1	1549	1644	(4667)	1619892
12	31.5	1.8	0.0	chr17	44830311	44830365	(38427076)	+	G-rich	Low_complexity	1	56	(0)	1620809
51	0.0	0.0	0.0	chr17	44936556	44936599	(38320842)	+	(CT)n	Simple_repeat	1	44	(0)	1621009
23	0.0	0.0	0.0	chr17	44936600	44936624	(38320817)	+	(AT)n	Simple_repeat	1	25	(0)	1621010
2867	0.3	0.0	0.0	chr17	44961605	44961910	(38295531)	+	AluYb9	SINE/Alu	1	306	(12)	1621068
29	0.0	0.0	0.0	chr17	44961911	44961935	(38295506)	+	(AG)n	Simple_repeat	1	25	(0)	1621069
16	23.8	2.0	1.9	chr17	44968026	44968076	(38289365)	+	(AGC)n	Simple_repeat	1	52	(0)	1621079
43	2.3	0.0	2.2	chr17	45003532	45003577	(38253864)	+	(CT)n	Simple_repeat	1	46	(0)	1621149
17	22.2	2.9	4.3	chr17	45019336	45019403	(38238038)	+	(GCGG)n	Simple_repeat	1	70	(0)	1621191
427	29.1	14.3	1.9	chr17	45051197	45051403	(38206038)	+	MIRb	SINE/MIR	25	261	(7)	1621259
218	32.4	0.9	9.0	chr17	45129500	45129554	(38127887)	+	MamRTE1	LINE/RTE-BovB	2458	2505	(1307)	1621404
428	29.5	8.5	4.3	chr17	45129555	45129706	(38127735)	+	MIRb	SINE/MIR	25	247	(21)	1621405
17	27.4	0.0	4.2	chr17	45132421	45132491	(38124950)	+	G-rich	Low_complexity	1	71	(0)	1621409
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
821	15.7	0.0	0.0	chr17	46059728	46059848	(37197593)	C	AluSx3	SINE/Alu	(25)	286	166	1623308
1872	17.4	1.3	0.7	chr17	46147293	46147596	(37109845)	+	AluJb	SINE/Alu	1	306	(6)	1623459
20	14.6	0.0	0.0	chr17	46147597	46147634	(37109807)	+	(GAGA)n	Simple_repeat	1	38	(0)	1623460
1515	13.5	0.9	1.7	chr17	46154350	46154579	(37102862)	C	AluJb	SINE/Alu	(82)	230	3	1623470
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
2088	7.8	1.1	0.0	chr17	47174694	47174951	(36082490)	+	AluSq	SINE/Alu	21	281	(32)	1625483
28	5.8	0.0	0.0	chr17	47174969	47175004	(36082437)	+	(ACAGG)n	Simple_repeat	1	36	(0)	1625484
19	13.4	0.0	0.0	chr17	47175006	47175039	(36082402)	+	(AGAA)n	Simple_repeat	1	34	(0)	1625485
65	0.0	0.0	0.0	chr17	47175040	47175097	(36082344)	+	(AGGA)n	Simple_repeat	1	58	(0)	1625486
326	35.4	1.7	0.0	chr17	47243795	47243907	(36013534)	C	L1MEd	LINE/L1	(4993)	2093	1979	1625644
75	17.9	0.6	3.1	chr17	47243909	47244070	(36013371)	+	(TCTT)n	Simple_repeat	1	163	(0)	1625645
34	7.2	0.0	0.0	chr17	47244072	47244116	(36013325)	+	(CCTT)n	Simple_repeat	1	45	(0)	1625646
1258	17.6	13.7	0.0	chr17	47287912	47288182	(35969259)	C	AluJo	SINE/Alu	(0)	312	6	1625733
41	2.6	0.0	0.0	chr17	47288207	47288246	(35969195)	+	(AG)n	Simple_repeat	1	40	(0)	1625734
493	27.8	12.8	1.0	chr17	47288257	47288456	(35968985)	+	Plat_L3	LINE/CR1	3160	3386	(200)	1625735
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
15	14.2	10.7	1.6	chr17	47650121	47650176	(35607265)	+	(ACCCC)n	Simple_repeat	1	62	(0)	1626489
17	23.2	0.0	0.0	chr17	48049056	48049091	(35208350)	+	(GT)n	Simple_repeat	1	36	(0)	1627188
582	20.2	3.0	3.7	chr17	48092313	48092457	(35164984)	+	FLAM_C	SINE/Alu	6	282	(20)	1627271
2134	10.3	2.8	0.0	chr17	48092469	48092750	(35164691)	C	AluSg4	SINE/Alu	(19)	291	2	1627272
51	2.1	0.0	0.0	chr17	48239830	48239877	(35017564)	+	(GA)n	Simple_repeat	1	48	(0)	1627521
803	17.1	4.7	12.8	chr17	48245573	48245693	(35011748)	+	MIR	SINE/MIR	34	143	(65)	1627526
2283	11.9	0.3	0.0	chr17	48245694	48246003	(35011438)	+	AluSz	SINE/Alu	1	311	(1)	1627527
24	18.7	2.0	0.0	chr17	48252225	48252273	(35005168)	+	GA-rich	Low_complexity	1	50	(0)	1627537
375	24.4	13.5	6.2	chr17	48531707	48531898	(34725543)	C	L1MEd	LINE/L1	(5907)	1179	972	1628057
12	17.5	0.0	5.6	chr17	48555184	48555219	(34702222)	+	GA-rich	Low_complexity	1	36	(0)	1628090
65	12.5	4.7	0.8	chr17	48555273	48555400	(34702041)	+	GA-rich	Low_complexity	1	134	(0)	1628090
31	20.7	1.6	0.0	chr17	48569019	48569082	(34688359)	+	(CT)n	Simple_repeat	1	65	(0)	1628106
18	4.7	0.0	0.0	chr17	48578628	48578649	(34678792)	+	(AG)n	Simple_repeat	1	22	(0)	1628115
30	18.1	5.2	1.2	chr17	48604820	48604896	(34652545)	+	(TC)n	Simple_repeat	1	81	(0)	1628133
14	22.1	2.4	0.0	chr17	48606351	48606392	(34651049)	+	A-rich	Low_complexity	1	43	(0)	1628135
38	23.7	4.2	3.4	chr17	48612615	48612756	(34644685)	+	GA-rich	Low_complexity	1	148	(0)	1628143
57	29.1	1.7	0.0	chr17	48615214	48615385	(34642056)	+	GA-rich	Low_complexity	1	175	(0)	1628150
16	20.9	1.1	10.1	chr17	48625316	48625427	(34632014)	+	(CCGGCCC)n	Simple_repeat	1	101	(0)	1628155
63	0.0	0.0	0.0	chr17	48677964	48678017	(34579424)	+	(TC)n	Simple_repeat	1	54	(0)	1628260
17	4.5	0.0	4.0	chr17	49003973	49003997	(34253444)	+	(AG)n	Simple_repeat	1	25	(0)	1629014
12	28.2	1.7	3.3	chr17	49004032	49004090	(34253351)	+	(CGCCC)n	Simple_repeat	1	60	(0)	1629015
152	24.6	5.0	0.2	chr17	49165249	49165704	(34091737)	+	(TC)n	Simple_repeat	1	479	(0)	1629350
22	11.0	0.0	2.4	chr17	49193541	49193581	(34063860)	+	(GAAA)n	Simple_repeat	1	41	(0)	1629402
42	16.9	6.4	0.7	chr17	49193608	49193719	(34063722)	+	GA-rich	Low_complexity	1	118	(0)	1629403
23	12.2	3.4	4.9	chr17	49495192	49495253	(33762188)	+	(GGCGG)n	Simple_repeat	1	61	(0)	1630052
15	18.4	8.2	3.8	chr17	49495286	49495358	(33762083)	+	(CGCAG)n	Simple_repeat	1	79	(0)	1630053
15	16.9	2.4	2.3	chr17	49868846	49868887	(33388554)	+	(CTCTGTC)n	Simple_repeat	1	43	(0)	1630723
75	0.0	2.8	0.0	chr17	49868899	49868969	(33388472)	+	(TC)n	Simple_repeat	1	73	(0)	1630724
14	20.7	2.6	0.0	chr17	49987921	49987959	(33269482)	+	G-rich	Low_complexity	1	40	(0)	1630938
20	18.5	3.3	3.2	chr17	49988071	49988130	(33269311)	+	(CCCT)n	Simple_repeat	1	62	(0)	1630939
32	11.0	8.4	1.3	chr17	49995335	49995412	(33262029)	+	(CT)n	Simple_repeat	1	83	(0)	1630947
37	0.0	0.0	0.0	chr17	49995434	49995465	(33261976)	+	(AC)n	Simple_repeat	1	32	(0)	1630948
60	0.0	0.0	0.0	chr17	50034281	50034331	(33223110)	+	(AG)n	Simple_repeat	1	51	(0)	1631040
24	10.8	2.4	2.3	chr17	50034413	50034454	(33222987)	+	GA-rich	Low_complexity	1	43	(0)	1631041
477	10.9	2.1	5.2	chr17	50065577	50065673	(33191768)	C	THE1B	LTR/ERVL-MaLR	(81)	283	190	1631093
26	13.3	6.8	0.0	chr17	50065677	50065699	(33191742)	+	(CTCT)n	Simple_repeat	1	62	(0)	1631094
16	10.0	2.9	2.8	chr17	50065700	50065734	(33191707)	+	(TCTTT)n	Simple_repeat	1	36	(0)	1631095
2423	9.9	0.0	0.0	chr17	50065753	50066056	(33191385)	+	AluSx3	SINE/Alu	2	305	(6)	1631096
30	8.3	0.0	0.0	chr17	50129804	50129842	(33127599)	+	(GT)n	Simple_repeat	1	39	(0)	1631212
22	6.2	5.9	0.0	chr17	50129845	50129878	(33127563)	+	(AG)n	Simple_repeat	1	36	(0)	1631213
12	16.0	0.0	3.3	chr17	50150989	50151018	(33106423)	+	(CGCCG)n	Simple_repeat	1	30	(0)	1631240
18	4.0	0.0	0.0	chr17	50151017	50151042	(33106399)	+	(CCTC)n	Simple_repeat	1	26	(0)	1631241
16	22.0	2.0	2.0	chr17	50151187	50151236	(33106205)	+	(CCCTC)n	Simple_repeat	1	51	(0)	1631242
12	27.1	0.0	2.2	chr17	50560616	50560661	(32696780)	+	(GGCGCGC)n	Simple_repeat	1	46	(0)	1632032
13	3.0	10.0	6.8	chr17	50560724	50560763	(32696678)	+	(GCTC)n	Simple_repeat	1	44	(0)	1632033
25	26.4	0.0	1.4	chr17	50560762	50560835	(32696606)	+	(CGG)n	Simple_repeat	1	74	(0)	1632034
380	30.3	9.2	0.5	chr17	50694198	50694396	(32563045)	C	Eulor2B	DNA?	(47)	226	9	1632259
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
359	18.5	0.0	0.0	chr17	50931876	50931929	(32325512)	+	AluJb	SINE/Alu	214	267	(45)	1632766
57	1.8	1.8	0.0	chr17	50931938	50931994	(32325447)	+	(GA)n	Simple_repeat	1	58	(0)	1632767
1054	20.0	0.0	1.0	chr17	51017112	51017313	(32240128)	C	MER105	DNA/hAT-Charlie	(0)	203	4	1632923
2049	26.3	13.4	4.8	chr17	51017314	51017386	(32240055)	+	HAL1	LINE/L1	2298	2369	(138)	1632921
389	24.7	1.1	1.1	chr17	51017402	51017495	(32239946)	+	HAL1	LINE/L1	1675	1768	(739)	1632924
38	2.8	0.0	0.0	chr17	51017520	51017556	(32239885)	+	(GA)n	Simple_repeat	1	37	(0)	1632925
519	28.6	4.1	2.1	chr17	51017561	51017703	(32239738)	+	MIRb	SINE/MIR	55	200	(68)	1632926
44	3.9	1.8	1.8	chr17	51641127	51641181	(31616260)	+	(CT)n	Simple_repeat	1	56	(0)	1634146
94	27.5	2.8	0.7	chr17	55335565	55335853	(27921588)	+	(TC)n	Simple_repeat	1	297	(0)	1639444
72	8.7	0.9	1.7	chr17	55734130	55734243	(27523198)	+	(TC)n	Simple_repeat	1	115	(0)	1640144
186	17.1	0.0	2.8	chr17	55734304	55734339	(27523102)	C	MIRb	SINE/MIR	(38)	230	196	1640145
29	11.3	0.0	0.0	chr17	56495314	56495361	(26762080)	+	(TCTC)n	Simple_repeat	1	48	(0)	1641371
14	20.8	1.8	5.4	chr17	56592518	56592572	(26664869)	+	(ACAGAC)n	Simple_repeat	1	56	(0)	1641533
591	21.4	9.7	1.2	chr17	56811921	56812081	(26445360)	+	MER5B	DNA/hAT-Charlie	1	176	(2)	1642027
18	23.9	0.0	0.0	chr17	56812160	56812199	(26445242)	+	GA-rich	Low_complexity	1	40	(0)	1642028
929	19.8	4.2	3.7	chr17	56812237	56812451	(26444990)	C	MER20	DNA/hAT-Charlie	(3)	216	1	1642029
30	18.6	0.0	0.0	chr17	56914753	56914813	(26342628)	+	(CTCT)n	Simple_repeat	1	61	(0)	1642233
18	18.0	3.9	1.9	chr17	56960631	56960682	(26296759)	+	(CATCCC)n	Simple_repeat	1	54	(0)	1642328
16	22.7	4.6	2.9	chr17	56960706	56960770	(26296671)	+	(GCCC)n	Simple_repeat	1	68	(0)	1642329
4116	21.2	15.2	9.3	chr17	57062099	57062359	(26195082)	C	Zaphod	DNA/hAT-Tip100	(2938)	1093	926	1642566
2057	12.0	0.3	3.5	chr17	57062360	57062675	(26194766)	C	AluSz	SINE/Alu	(6)	306	1	1642571
16	18.6	0.0	2.9	chr17	57257428	57257461	(25999980)	+	(TC)n	Simple_repeat	1	34	(0)	1642981
31	0.0	0.0	0.0	chr17	57541152	57541178	(25716263)	+	(AG)n	Simple_repeat	1	27	(0)	1643446
18	16.6	8.3	0.0	chr17	57586348	57586395	(25671046)	+	(TC)n	Simple_repeat	1	52	(0)	1643500
21	18.4	2.3	0.0	chr17	57674604	57674646	(25582795)	+	(CT)n	Simple_repeat	1	44	(0)	1643629
191	21.9	0.0	0.0	chr17	57747853	57747893	(25509548)	+	L2b	LINE/L2	3378	3418	(8)	1643762
30	8.3	0.0	0.0	chr17	57747938	57747976	(25509465)	+	(TC)n	Simple_repeat	1	39	(0)	1643767
2203	10.1	0.0	0.0	chr17	57797456	57797733	(25459708)	+	AluSx	SINE/Alu	1	278	(34)	1643856
79	0.0	0.0	0.0	chr17	57797734	57797800	(25459641)	+	(TC)n	Simple_repeat	1	67	(0)	1643857
1266	20.1	5.4	17.1	chr17	57797801	57798175	(25459266)	C	MLT1B	LTR/ERVL-MaLR	(61)	329	2	1643855
843	28.6	2.1	3.3	chr17	57823468	57823709	(25433732)	+	Eulor3	DNA?	21	259	(47)	1643909
896	13.2	0.0	0.8	chr17	58028608	58028736	(25228705)	+	AluSx3	SINE/Alu	176	303	(8)	1644304
1508	16.8	0.0	2.1	chr17	58028737	58028979	(25228462)	+	MSTB	LTR/ERVL-MaLR	189	426	(0)	1644302
74	15.0	3.2	1.9	chr17	58127952	58128108	(25129333)	+	(TCTT)n	Simple_repeat	1	162	(0)	1644509
948	18.5	0.0	0.0	chr17	58128111	58128256	(25129185)	C	AluJr	SINE/Alu	(31)	281	136	1644510
442	29.3	6.7	1.9	chr17	58164514	58164725	(25092716)	C	L4_A_Mam	LINE/RTE-X	(2748)	2242	2020	1644573
49	0.0	2.2	0.0	chr17	58164766	58164810	(25092631)	+	(GA)n	Simple_repeat	1	46	(0)	1644574
1629	17.2	6.3	1.8	chr17	58164812	58165142	(25092299)	C	MLT2C1	LTR/ERVL	(50)	347	1	1644575
240	41.8	5.9	1.3	chr17	58387991	58388218	(24869223)	C	MamRTE1	LINE/RTE-BovB	(2798)	1014	776	1644916
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
33	23.1	4.1	1.0	chr17	59434742	59434839	(23822602)	+	(TTTC)n	Simple_repeat	1	102	(0)	1647220
30	3.5	0.0	0.0	chr17	59434877	59434906	(23822535)	+	(CT)n	Simple_repeat	1	30	(0)	1647221
305	24.0	11.3	19.5	chr17	59550787	59550903	(23706538)	C	L1ME1	LINE/L1	(5354)	1749	1649	1647492
61	1.7	1.7	0.0	chr17	59550904	59550963	(23706478)	+	(TC)n	Simple_repeat	1	61	(0)	1647502
305	24.0	11.3	19.5	chr17	59550964	59551047	(23706394)	C	L1ME1	LINE/L1	(5455)	1648	1597	1647492
2382	3.4	0.0	0.4	chr17	59551048	59551315	(23706126)	C	AluY	SINE/Alu	(16)	295	29	1647503
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
2410	9.5	0.0	0.0	chr17	59661822	59662117	(23595324)	+	AluSx1	SINE/Alu	2	297	(15)	1647712
127	14.9	1.4	4.4	chr17	60144143	60144356	(23113085)	+	(CTTT)n	Simple_repeat	4	210	(0)	1648664
1869	16.5	0.3	4.4	chr17	60144357	60144677	(23112764)	C	AluJo	SINE/Alu	(4)	308	1	1648665
4314	23.7	10.8	6.2	chr17	60240031	60241000	(23016441)	C	L1MB5	LINE/L1	(5231)	1376	357	1648847
35	19.3	2.4	1.2	chr17	60330436	60330539	(22926902)	+	(TTTC)n	Simple_repeat	1	105	(0)	1649010
1429	18.4	0.0	0.0	chr17	60330540	60330762	(22926679)	C	AluJb	SINE/Alu	(5)	307	85	1649011
2075	12.5	0.0	1.7	chr17	61045533	61045819	(22211622)	+	AluSz	SINE/Alu	1	282	(30)	1650434
25	3.5	0.0	0.0	chr17	61045820	61045849	(22211592)	+	(TC)n	Simple_repeat	1	30	(0)	1650435
206	3.9	4.6	0.0	chr17	61045850	61046111	(22211330)	+	(TA)n	Simple_repeat	1	274	(0)	1650436
101	3.1	0.0	0.0	chr17	61322782	61322880	(21934561)	+	(GA)n	Simple_repeat	1	99	(0)	1650872
30	5.5	0.0	0.0	chr17	61409319	61409356	(21848085)	+	(CGGCCCCT)n	Simple_repeat	1	38	(0)	1651014
14	8.4	0.0	3.7	chr17	61409842	61409868	(21847573)	+	(TGGG)n	Simple_repeat	1	27	(0)	1651015
11	21.5	6.0	1.9	chr17	61412641	61412690	(21844751)	+	(AGGCAC)n	Simple_repeat	1	53	(0)	1651017
285	30.9	4.3	4.3	chr17	61494480	61494594	(21762847)	+	MIRb	SINE/MIR	110	224	(44)	1651137
2110	6.8	0.0	0.4	chr17	61845943	61846191	(21411250)	+	AluY	SINE/Alu	43	290	(21)	1651708
39	6.4	0.0	0.0	chr17	61846227	61846276	(21411165)	+	(AG)n	Simple_repeat	1	50	(0)	1651709
869	23.8	1.5	5.6	chr17	61846277	61846384	(21411057)	C	Charlie1a	DNA/hAT-Charlie	(1250)	205	105	1651707
2190	12.6	0.3	0.7	chr17	61846385	61846686	(21410755)	C	AluJb	SINE/Alu	(11)	301	1	1651710
875	18.1	1.3	0.0	chr17	62213084	62213232	(21044209)	C	AluJb	SINE/Alu	(25)	287	137	1652529
17	16.3	0.0	0.0	chr17	62213234	62213268	(21044173)	+	(CCTT)n	Simple_repeat	1	35	(0)	1652530
35	11.5	0.0	0.0	chr17	62213271	62213327	(21044114)	+	(CT)n	Simple_repeat	1	57	(0)	1652531
31	7.5	0.0	0.0	chr17	62213328	62213370	(21044071)	+	(CCTT)n	Simple_repeat	1	43	(0)	1652532
2059	13.8	0.3	0.3	chr17	62213372	62213669	(21043772)	C	AluSx	SINE/Alu	(13)	299	2	1652533
15	5.6	0.0	0.0	chr17	62628029	62628047	(20629394)	+	(GT)n	Simple_repeat	1	19	(0)	1653392
1943	13.4	7.2	11.4	chr17	62912330	62912734	(20344707)	+	MSTD	LTR/ERVL-MaLR	10	396	(0)	1653932
12	15.7	2.6	5.0	chr17	63150952	63150990	(20106451)	+	(AGTTTTC)n	Simple_repeat	1	40	(0)	1654325
2140	12.5	0.0	1.0	chr17	63650299	63650601	(19606840)	C	AluSx	SINE/Alu	(11)	301	2	1655100
44	0.0	0.0	0.0	chr17	63650659	63650696	(19606745)	+	(AG)n	Simple_repeat	1	38	(0)	1655101
1640	17.7	0.0	1.9	chr17	63650697	63650967	(19606474)	C	AluJr	SINE/Alu	(17)	295	30	1655102
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
28	20.9	1.3	2.6	chr17	64631206	64631281	(18626160)	+	G-rich	Low_complexity	1	77	(0)	1656938
69	3.0	0.0	0.0	chr17	64631282	64631349	(18626092)	+	(GA)n	Simple_repeat	1	68	(0)	1656939
32	20.7	0.0	1.4	chr17	64670968	64671041	(18586400)	+	(CTCT)n	Simple_repeat	1	74	(0)	1657040
1967	17.4	0.3	0.3	chr17	64686003	64686312	(18571129)	+	AluJo	SINE/Alu	1	310	(2)	1657087
214	26.9	4.3	1.5	chr17	64686324	64686391	(18571050)	+	MER5A	DNA/hAT-Charlie	91	160	(29)	1657088
2265	10.7	0.3	0.3	chr17	64686392	64686689	(18570752)	C	AluSz	SINE/Alu	(14)	298	1	1657089
812	21.5	6.2	3.2	chr17	64722774	64722959	(18534482)	+	AluJb	SINE/Alu	121	312	(0)	1657182
23	22.7	3.1	0.0	chr17	64722960	64723023	(18534418)	+	GA-rich	Low_complexity	1	66	(0)	1657183
2366	10.9	0.0	0.0	chr17	64723029	64723341	(18534100)	+	AluSq2	SINE/Alu	1	313	(0)	1657184
457	19.1	0.0	6.0	chr17	65031763	65031846	(18225595)	+	AluJo	SINE/Alu	137	215	(97)	1657803
60	1.8	0.0	0.0	chr17	65031867	65031922	(18225519)	+	(AG)n	Simple_repeat	1	56	(0)	1657804
32	0.0	0.0	0.0	chr17	65031923	65031957	(18225484)	+	(TG)n	Simple_repeat	1	35	(0)	1657805
1428	25.1	9.2	1.0	chr17	65469856	65470279	(17787162)	+	MLT1F	LTR/ERVL-MaLR	1	495	(65)	1658734
46	8.1	5.0	0.0	chr17	65470292	65470371	(17787070)	+	(CT)n	Simple_repeat	1	84	(0)	1658735
766	15.9	0.0	0.0	chr17	65470379	65470491	(17786950)	C	FRAM	SINE/Alu	(32)	144	32	1658736
560	26.1	0.1	0.1	chr17	65487702	65489026	(17768415)	+	GA-rich	Low_complexity	1	1325	(0)	1658778
1316	14.8	2.6	0.5	chr17	65489027	65489250	(17768191)	C	MSTB	LTR/ERVL-MaLR	(197)	229	1	1658777
202	36.2	4.9	0.8	chr17	66185904	66186020	(17071421)	+	L2c	LINE/L2	419	540	(2879)	1659789
22	11.7	2.7	0.0	chr17	66186025	66186061	(17071380)	+	(TC)n	Simple_repeat	1	38	(0)	1659790
50	2.2	0.0	0.0	chr17	66285080	66285126	(16972315)	+	(TC)n	Simple_repeat	1	47	(0)	1660026
30	30.3	3.4	2.6	chr17	66302124	66302272	(16955169)	+	GA-rich	Low_complexity	1	154	(0)	1660070
187	27.1	14.7	1.9	chr17	66376073	66376226	(16881215)	+	MER5A	DNA/hAT-Charlie	7	183	(6)	1660177
16	9.3	0.0	0.0	chr17	66450009	66450031	(16807410)	+	(T)n	Simple_repeat	1	23	(0)	1660291
2314	8.1	0.3	1.7	chr17	66502661	66502957	(16754484)	C	AluY	SINE/Alu	(17)	294	2	1660372
259	35.4	8.6	6.2	chr17	66570799	66571024	(16686417)	+	MIRc	SINE/MIR	4	235	(33)	1660474
41	2.4	0.0	2.3	chr17	67002603	67002646	(16254795)	+	(CT)n	Simple_repeat	1	44	(0)	1661217
573	30.4	8.3	2.4	chr17	67002663	67002911	(16254530)	+	MIRb	SINE/MIR	2	266	(2)	1661218
20	0.0	0.0	0.0	chr17	67089648	67089669	(16167772)	+	(TA)n	Simple_repeat	1	22	(0)	1661359
52	6.3	0.0	0.0	chr17	67089669	67089735	(16167706)	+	(AG)n	Simple_repeat	1	67	(0)	1661360
5110	20.6	4.5	4.3	chr17	67089739	67091148	(16166293)	C	L1MD	LINE/L1	(1821)	4325	2914	1661361
16	21.6	4.1	0.0	chr17	67378916	67378966	(15878475)	+	G-rich	Low_complexity	1	53	(0)	1661914
37	6.4	2.0	0.0	chr17	67697274	67697322	(15560119)	+	(CT)n	Simple_repeat	1	50	(0)	1662570
443	28.6	5.2	1.2	chr17	68020281	68020446	(15236995)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1663343
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
34	2.1	8.3	0.0	chr17	68287924	68287971	(14969470)	+	(TC)n	Simple_repeat	1	52	(0)	1663900
2316	9.6	0.0	2.9	chr17	68287987	68288299	(14969142)	C	AluSx3	SINE/Alu	(7)	304	1	1663901
126	5.9	2.8	0.6	chr17	68352027	68352204	(14905237)	+	(GA)n	Simple_repeat	1	183	(0)	1664036
503	26.0	9.2	9.5	chr17	68352261	68352497	(14904944)	+	L1ME4a	LINE/L1	5798	6044	(80)	1664037
44	0.0	0.0	0.0	chr17	68499369	68499406	(14758035)	+	(AG)n	Simple_repeat	1	38	(0)	1664313
43	0.0	0.0	0.0	chr17	68510160	68510196	(14747245)	+	(AG)n	Simple_repeat	1	37	(0)	1664333
704	21.5	10.9	0.5	chr17	68510231	68510426	(14747015)	+	MIR	SINE/MIR	43	261	(1)	1664334
1616	15.0	2.5	4.0	chr17	69400272	69400518	(13856923)	+	AluJb	SINE/Alu	1	243	(69)	1665698
14754	14.2	1.2	4.5	chr17	69400519	69400536	(13856905)	+	Tigger1	DNA/TcMar-Tigger	1170	1170	(1248)	1665695
37	0.0	0.0	0.0	chr17	69400537	69400568	(13856873)	+	(GA)n	Simple_repeat	1	32	(0)	1665699
14754	14.2	1.2	4.5	chr17	69400569	69401633	(13855808)	+	Tigger1	DNA/TcMar-Tigger	1170	2231	(187)	1665695
228	35.5	3.2	0.8	chr17	69563591	69563712	(13693729)	+	MIRb	SINE/MIR	19	143	(125)	1665983
38	14.2	0.0	0.0	chr17	69563716	69563777	(13693664)	+	(TC)n	Simple_repeat	1	62	(0)	1665984
2627	4.3	1.3	0.0	chr17	69563778	69564081	(13693360)	C	AluY	SINE/Alu	(3)	308	1	1665985
32	9.2	6.9	0.0	chr17	69720958	69721015	(13536426)	+	(TC)n	Simple_repeat	1	62	(0)	1666224
14	21.0	6.2	2.9	chr17	69721086	69721149	(13536292)	+	(ATATAAC)n	Simple_repeat	1	68	(0)	1666225
252	35.5	8.7	1.6	chr17	69830689	69831006	(13426435)	C	L1ME2	LINE/L1	(5739)	661	319	1666371
73	4.1	0.0	0.0	chr17	69831023	69831098	(13426343)	+	(TC)n	Simple_repeat	1	76	(0)	1666372
29	10.1	1.8	3.5	chr17	69831099	69831155	(13426286)	+	(CCTC)n	Simple_repeat	1	58	(0)	1666373
16	4.5	0.0	0.0	chr17	70089487	70089509	(13167932)	+	(TTTG)n	Simple_repeat	1	23	(0)	1666788
35	0.0	0.0	0.0	chr17	70183753	70183782	(13073659)	+	(TC)n	Simple_repeat	1	30	(0)	1666915
21	23.7	7.4	2.0	chr17	70210830	70210890	(13046551)	+	(CT)n	Simple_repeat	1	67	(0)	1666959
37	6.0	3.9	0.0	chr17	70210891	70210942	(13046499)	+	(TC)n	Simple_repeat	1	54	(0)	1666960
21	23.7	7.4	2.0	chr17	70210943	70210975	(13046466)	+	(CT)n	Simple_repeat	2	33	(0)	1666961
212	18.2	9.8	1.8	chr17	70661547	70661602	(12595839)	C	UCON132b	DNA/hAT-Tip100	(22)	126	66	1667634
3189	22.1	6.6	4.2	chr17	70792708	70793160	(12464281)	C	MER21C	LTR/ERVL	(432)	506	39	1667813
85	12.5	6.1	0.0	chr17	70793162	70793326	(12464115)	+	(TC)n	Simple_repeat	1	175	(0)	1667816
242	29.6	5.8	9.2	chr17	70793390	70793675	(12463766)	C	LTR16A2	LTR/ERVL	(76)	413	164	1667817
47	0.0	0.0	0.0	chr17	70928399	70928438	(12329003)	+	(AG)n	Simple_repeat	1	40	(0)	1668014
1566	23.8	8.1	4.0	chr17	71122775	71122821	(12134620)	C	MLT2B1	LTR/ERVL	(0)	520	475	1668305
49	2.2	0.0	0.0	chr17	71122822	71122867	(12134574)	+	(GA)n	Simple_repeat	1	46	(0)	1668306
1566	23.8	8.1	4.0	chr17	71122868	71123313	(12134128)	C	MLT2B1	LTR/ERVL	(46)	474	6	1668305
784	10.9	7.1	1.7	chr17	71177311	71177429	(12080012)	C	AluSx3	SINE/Alu	(14)	297	172	1668384
1680	20.6	4.5	2.1	chr17	71345095	71345299	(11912142)	+	MSTD	LTR/ERVL-MaLR	1	213	(183)	1668648
30	7.4	2.3	0.0	chr17	71345300	71345342	(11912099)	+	(TC)n	Simple_repeat	1	44	(0)	1668649
1680	20.6	4.5	2.1	chr17	71345343	71345522	(11911919)	+	MSTD	LTR/ERVL-MaLR	214	396	(0)	1668648
5633	26.6	6.3	3.6	chr17	71345526	71346953	(11910488)	+	MSTD-int	LTR/ERVL-MaLR	3	1469	(266)	1668648
2168	17.5	6.3	0.5	chr17	71414499	71414707	(11842734)	C	MSTA	LTR/ERVL-MaLR	(0)	428	211	1668759
40	2.6	0.0	0.0	chr17	71414708	71414746	(11842695)	+	(GA)n	Simple_repeat	1	39	(0)	1668760
2168	17.5	6.3	0.5	chr17	71414747	71414939	(11842502)	C	MSTA	LTR/ERVL-MaLR	(218)	210	1	1668759
77	13.9	4.0	3.3	chr17	72060266	72060440	(11197001)	+	(TTTC)n	Simple_repeat	1	182	(0)	1669749
960	11.9	0.0	0.0	chr17	72060441	72060566	(11196875)	C	AluSx4	SINE/Alu	(22)	288	163	1669750
54	10.8	0.0	0.0	chr17	72468162	72468243	(10789198)	+	(GAGA)n	Simple_repeat	1	82	(0)	1670433
24	6.5	0.0	0.0	chr17	72529779	72529810	(10727631)	+	(AC)n	Simple_repeat	1	32	(0)	1670551
21	0.0	0.0	0.0	chr17	72529810	72529832	(10727609)	+	(CT)n	Simple_repeat	1	23	(0)	1670552
2135	14.4	1.3	0.0	chr17	72899680	72899985	(10357456)	+	AluSx1	SINE/Alu	1	310	(2)	1671206
154	6.4	3.7	1.6	chr17	72899986	72900227	(10357214)	+	(GAAA)n	Simple_repeat	1	251	(0)	1671207
3330	11.9	6.1	3.5	chr17	72966869	72967293	(10290148)	+	MER1A	DNA/hAT-Charlie	111	528	(1)	1671332
35	0.0	0.0	0.0	chr17	72967371	72967400	(10290041)	+	(AG)n	Simple_repeat	1	30	(0)	1671334
15	0.0	0.0	0.0	chr17	72967401	72967417	(10290024)	+	(TG)n	Simple_repeat	1	17	(0)	1671335
2154	14.0	0.3	0.0	chr17	73119906	73120213	(10137228)	+	AluSx1	SINE/Alu	1	309	(3)	1671675
71	15.7	2.8	0.7	chr17	73120214	73120358	(10137083)	+	A-rich	Low_complexity	1	149	(0)	1671676
236	20.8	0.0	1.0	chr17	73147901	73148384	(10109057)	+	(CT)n	Simple_repeat	1	484	(0)	1671742
1810	13.0	5.8	0.0	chr17	73158742	73159002	(10098439)	+	AluJb	SINE/Alu	1	277	(35)	1671763
49	0.0	4.1	0.0	chr17	73159004	73159052	(10098389)	+	(TC)n	Simple_repeat	1	51	(0)	1671764
24	27.6	0.0	3.8	chr17	73159053	73159131	(10098310)	+	(AT)n	Simple_repeat	1	79	(0)	1671765
221	33.3	1.2	6.7	chr17	73575386	73575455	(9681986)	C	L2a	LINE/L2	(0)	3426	3362	1672577
654	31.6	5.8	2.0	chr17	73575456	73575704	(9681737)	+	MIR	SINE/MIR	4	262	(0)	1672578
275	34.1	6.8	3.0	chr17	73575713	73575881	(9681560)	C	L2c	LINE/L2	(52)	3335	3160	1672579
769	28.9	3.4	1.2	chr17	73641220	73641478	(9615963)	C	MIRb	SINE/MIR	(0)	268	4	1672707
761	20.4	2.8	9.1	chr17	73649380	73649767	(9607674)	C	MLT1A	LTR/ERVL-MaLR	(50)	346	12	1672712
15133	13.0	1.7	3.2	chr17	73701809	73702304	(9555137)	C	Tigger1	DNA/TcMar-Tigger	(1567)	851	349	1672800
40	0.0	0.0	0.0	chr17	73702305	73702338	(9555103)	+	(GA)n	Simple_repeat	1	34	(0)	1672803
15133	13.0	1.7	3.2	chr17	73702339	73702513	(9554928)	C	Tigger1	DNA/TcMar-Tigger	(2070)	348	203	1672800
746	25.2	0.0	0.0	chr17	74296194	74296324	(8961117)	+	FLAM_C	SINE/Alu	2	132	(11)	1673875
47	15.2	2.4	0.0	chr17	74296325	74296408	(8961033)	+	GA-rich	Low_complexity	1	86	(0)	1673876
655	14.2	10.2	0.0	chr17	74296412	74296517	(8960924)	C	AluJr	SINE/Alu	(194)	118	1	1673877
2760	20.6	4.0	0.4	chr17	74296518	74297068	(8960373)	C	L1M4	LINE/L1	(6943)	574	3	1673866
49	5.8	0.0	0.0	chr17	74320161	74320215	(8937226)	+	(TC)n	Simple_repeat	1	55	(0)	1673936
1783	14.5	1.0	8.3	chr17	74320216	74320542	(8936899)	C	AluJo	SINE/Alu	(9)	303	1	1673937
29	13.2	0.0	0.0	chr17	74470387	74470436	(8787005)	+	(GAGA)n	Simple_repeat	1	50	(0)	1674213
80	2.6	0.0	0.0	chr17	74612202	74612278	(8645163)	+	(TC)n	Simple_repeat	1	77	(0)	1674459
650	18.0	3.5	0.0	chr17	74612279	74612389	(8645052)	C	FLAM_A	SINE/Alu	(27)	115	1	1674460
642	0.0	0.0	0.0	chr17	75033906	75033978	(8223463)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1675212
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
1942	7.1	0.7	4.8	chr17	75035539	75035832	(8221609)	+	AluSx3	SINE/Alu	1	282	(29)	1675216
16	8.3	0.0	0.0	chr17	75182636	75182661	(8074780)	+	(GGGA)n	Simple_repeat	1	26	(0)	1675545
439	27.3	6.1	0.0	chr17	75325623	75325776	(7931665)	C	MER102c	DNA/hAT-Charlie	(80)	251	88	1675864
696	19.3	0.0	2.2	chr17	75388606	75388740	(7868701)	C	FLAM_A	SINE/Alu	(10)	132	1	1676013
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
12	0.0	5.3	0.0	chr17	75721047	75721065	(7536376)	+	(GCA)n	Simple_repeat	1	20	(0)	1676646
13	21.7	0.0	2.6	chr17	75721317	75721355	(7536086)	+	(CGGCCC)n	Simple_repeat	1	39	(0)	1676647
1036	10.3	0.0	5.8	chr17	75956724	75956878	(7300563)	C	AluJr	SINE/Alu	(10)	302	157	1677094
73	0.0	0.0	0.0	chr17	75956911	75956972	(7300469)	+	(CT)n	Simple_repeat	1	62	(0)	1677095
2361	12.0	0.0	0.0	chr17	76230559	76230867	(7026574)	+	AluSg	SINE/Alu	2	310	(0)	1677619
31	7.7	0.0	0.0	chr17	76230868	76230909	(7026532)	+	(GA)n	Simple_repeat	1	42	(0)	1677620
925	18.5	0.0	0.0	chr17	76230934	76231079	(7026362)	C	AluJo	SINE/Alu	(7)	305	160	1677621
29	33.6	0.8	0.8	chr17	76453009	76453132	(6804309)	+	G-rich	Low_complexity	1	125	(0)	1678054
17	18.1	5.8	1.8	chr17	76501390	76501441	(6756000)	+	(GCG)n	Simple_repeat	1	55	(0)	1678147
1694	15.2	3.0	3.0	chr17	76533754	76534048	(6723393)	+	AluJr	SINE/Alu	1	295	(17)	1678226
38	8.7	8.0	0.0	chr17	76534090	76534164	(6723277)	+	(CTTT)n	Simple_repeat	1	81	(0)	1678227
2260	12.7	0.0	0.6	chr17	76534165	76534478	(6722963)	C	AluSx1	SINE/Alu	(0)	312	1	1678228
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
2302	10.2	0.0	4.6	chr17	76851473	76851659	(6405782)	+	AluSx1	SINE/Alu	137	309	(3)	1678891
1778	15.2	2.0	5.4	chr17	76854097	76854411	(6403030)	+	AluJo	SINE/Alu	1	304	(8)	1678900
2492	18.1	1.3	5.7	chr17	76854412	76854635	(6402806)	C	L1MB3	LINE/L1	(149)	6034	5830	1678899
2048	10.8	0.0	4.9	chr17	76854636	76854942	(6402499)	C	AluSx	SINE/Alu	(18)	294	3	1678901
169	28.7	0.4	0.2	chr17	77885221	77885688	(5371753)	+	(ATGG)n	Simple_repeat	1	470	(0)	1680818
60	32.8	2.7	0.0	chr17	77885687	77885905	(5371536)	+	GA-rich	Low_complexity	1	225	(0)	1680819
14	12.7	0.0	0.0	chr17	78378668	78378693	(4878748)	+	(GGC)n	Simple_repeat	1	26	(0)	1681762
33	6.4	4.1	0.0	chr17	78736390	78736438	(4521003)	+	(TC)n	Simple_repeat	1	51	(0)	1682346
23	3.7	0.0	0.0	chr17	78736440	78736467	(4520974)	+	(AC)n	Simple_repeat	1	28	(0)	1682347
85	4.2	6.5	0.0	chr17	79611091	79611213	(3646228)	+	(CT)n	Simple_repeat	1	131	(0)	1683649
58	4.0	5.2	0.0	chr17	79696418	79696494	(3560947)	+	(CT)n	Simple_repeat	1	81	(0)	1683775
4411	10.9	12.3	1.7	chr17	79696529	79697275	(3560166)	+	LTR1A2	LTR/ERV1	1	837	(0)	1683776
2309	7.0	0.7	0.0	chr17	79697547	79697833	(3559608)	+	AluSx1	SINE/Alu	9	297	(15)	1683777
22	25.8	1.8	0.0	chr17	79798645	79798701	(3458740)	+	GA-rich	Low_complexity	1	58	(0)	1683955
36	8.7	0.0	0.0	chr17	79806053	79806101	(3451340)	+	(TG)n	Simple_repeat	1	49	(0)	1683959
57	3.5	0.0	0.0	chr17	79806102	79806159	(3451282)	+	(GA)n	Simple_repeat	1	58	(0)	1683960
394	31.6	5.6	3.2	chr17	80008219	80008375	(3249066)	C	MIRb	SINE/MIR	(80)	188	28	1684289
2290	10.8	0.0	1.9	chr17	80069464	80069778	(3187663)	+	AluSc8	SINE/Alu	1	309	(2)	1684408
31	3.3	0.0	0.0	chr17	80069779	80069809	(3187632)	+	(AG)n	Simple_repeat	1	31	(0)	1684409
17	0.0	7.4	0.0	chr17	80069810	80069838	(3187603)	+	(AAAAG)n	Simple_repeat	1	31	(0)	1684410
40	25.8	1.7	1.7	chr17	80594982	80595097	(2662344)	+	GA-rich	Low_complexity	1	118	(0)	1685283
13	10.7	6.7	0.0	chr17	81239695	81239724	(2017717)	+	(CCCTT)n	Simple_repeat	1	32	(0)	1686024
12	22.6	4.2	2.0	chr17	81393862	81393909	(1863532)	+	(GGCC)n	Simple_repeat	1	50	(0)	1686225
20	7.9	0.0	0.0	chr17	81395099	81395125	(1862316)	+	(TG)n	Simple_repeat	1	27	(0)	1686226
13	8.8	11.1	0.0	chr17	81400579	81400614	(1856827)	+	(GCGCGG)n	Simple_repeat	1	40	(0)	1686232
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
16	14.5	3.1	9.1	chr17	81917970	81917993	(1339448)	+	(GCGG)n	Simple_repeat	1	42	(24)	1686906
14	8.2	0.0	3.6	chr17	81917994	81918021	(1339420)	+	(GGCCG)n	Simple_repeat	1	28	(0)	1686907
16	14.5	3.1	9.1	chr17	81918022	81918033	(1339408)	+	(GCGG)n	Simple_repeat	43	66	(0)	1686906
1671	16.1	0.3	8.6	chr17	81954593	81954916	(1302525)	C	AluJr4	SINE/Alu	(15)	297	1	1686959
51	2.0	1.9	0.0	chr17	81954932	81954983	(1302458)	+	(TC)n	Simple_repeat	1	53	(0)	1686960
2101	12.2	0.3	0.3	chr17	81954993	81955280	(1302161)	C	AluSx1	SINE/Alu	(24)	288	1	1686961
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
21	21.1	0.0	0.0	chr17	82098063	82098111	(1159330)	+	(CCCCGG)n	Simple_repeat	1	49	(0)	1687135
18	19.8	6.9	0.0	chr17	82098746	82098803	(1158638)	+	(CGCGG)n	Simple_repeat	1	62	(0)	1687137
758	9.6	0.8	1.9	chr17	82292212	82292364	(965077)	+	FLAM_C	SINE/Alu	2	145	(157)	1687435
1914	18.4	0.7	0.0	chr17	82338398	82338706	(918735)	+	AluJb	SINE/Alu	1	311	(1)	1687503
2095	10.7	2.3	1.0	chr17	82493739	82494038	(763403)	C	AluJb	SINE/Alu	(8)	304	1	1687728
41	0.0	0.0	0.0	chr17	82494059	82494093	(763348)	+	(AG)n	Simple_repeat	1	35	(0)	1687729
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
1758	18.6	1.1	9.5	chr18	304560	304958	(80068327)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1689576
6052	17.2	5.0	6.7	chr18	591724	591972	(79781313)	C	L1MDa	LINE/L1	(2624)	3913	3665	1690058
80	0.0	0.0	0.0	chr18	591973	592040	(79781245)	+	(CT)n	Simple_repeat	1	68	(0)	1690062
6052	17.2	5.0	6.7	chr18	592041	593126	(79780159)	C	L1MDa	LINE/L1	(2873)	3664	2600	1690058
1369	23.1	0.3	5.5	chr18	2820906	2821253	(77552032)	C	MLT2B3	LTR/ERVL	(2)	552	223	1693322
33	15.8	3.1	0.0	chr18	2821254	2821317	(77551968)	+	GA-rich	Low_complexity	1	66	(0)	1693323
3457	19.1	3.9	1.2	chr18	2821374	2822437	(77550848)	C	ERVL-B4-int	LTR/ERVL	(488)	5269	3899	1693324
266	35.6	1.7	0.8	chr18	3092056	3092174	(77281111)	+	L2a	LINE/L2	3307	3426	(0)	1693755
1756	16.6	2.1	0.7	chr18	3092209	3092492	(77280793)	C	AluJr	SINE/Alu	(24)	288	1	1693756
23	18.9	0.0	0.0	chr18	3874268	3874315	(76498970)	+	(TCTC)n	Simple_repeat	1	48	(0)	1695192
63	1.6	1.5	1.5	chr18	5606883	5606948	(74766337)	+	(TC)n	Simple_repeat	1	67	(0)	1697467
300	28.3	7.9	1.3	chr18	5606990	5607143	(74766142)	C	Chap1_Mam	DNA/hAT-Charlie	(170)	172	8	1697468
20	18.4	0.0	0.0	chr18	5896431	5896467	(74476818)	+	GA-rich	Low_complexity	1	37	(0)	1697836
75	1.5	0.0	0.0	chr18	5923164	5923231	(74450054)	+	(TC)n	Simple_repeat	1	68	(0)	1697876
17	5.0	0.0	0.0	chr18	5923232	5923252	(74450033)	+	(AC)n	Simple_repeat	1	21	(0)	1697877
688	24.4	3.6	3.6	chr18	6371035	6371255	(74002030)	C	MER58A	DNA/hAT-Charlie	(3)	221	1	1698459
43	13.3	0.0	0.0	chr18	6446353	6446419	(73926866)	+	(AG)n	Simple_repeat	1	67	(0)	1698563
365	37.2	6.6	4.1	chr18	6446537	6446878	(73926407)	C	L3b	LINE/CR1	(145)	5087	4737	1698564
31	0.0	0.0	0.0	chr18	6739646	6739672	(73633613)	+	(TC)n	Simple_repeat	1	27	(0)	1698989
83	2.8	6.4	0.0	chr18	6841115	6841223	(73532062)	+	(TC)n	Simple_repeat	1	116	(0)	1699130
27	24.5	0.9	0.9	chr18	7090643	7090746	(73282539)	+	GA-rich	Low_complexity	1	104	(0)	1699486
152	23.0	1.1	0.6	chr18	8240561	8240859	(72132426)	+	GA-rich	Low_complexity	58	357	(0)	1701121
746	23.7	0.8	2.1	chr18	8726309	8726496	(71646789)	C	MLT1A	LTR/ERVL-MaLR	(49)	325	175	1701851
20	27.6	0.0	0.0	chr18	8726497	8726548	(71646737)	+	(GC)n	Simple_repeat	1	52	(0)	1701852
474	18.4	0.0	1.1	chr18	8726611	8726698	(71646587)	C	MLT1A	LTR/ERVL-MaLR	(287)	87	1	1701851
1733	20.4	15.9	5.5	chr18	8874688	8875236	(71498049)	C	MLT1E3	LTR/ERVL-MaLR	(3)	621	5	1702048
82	0.0	2.6	0.0	chr18	8875336	8875412	(71497873)	+	(CT)n	Simple_repeat	1	79	(0)	1702049
486	30.7	5.2	1.8	chr18	8875427	8875592	(71497693)	C	LTR16A	LTR/ERVL	(99)	352	181	1702050
3225	13.8	1.4	9.8	chr18	9031195	9031797	(71341488)	+	MLT2B3	LTR/ERVL	3	554	(0)	1702308
3255	23.4	5.2	8.7	chr18	9177827	9179521	(71193764)	C	L1MDa	LINE/L1	(756)	5814	4230	1702596
12	20.1	5.0	0.0	chr18	9335075	9335114	(71038171)	+	G-rich	Low_complexity	1	42	(0)	1702842
19	0.0	0.0	0.0	chr18	9656750	9656770	(70716515)	+	(TA)n	Simple_repeat	1	21	(0)	1703435
55	0.0	0.0	0.0	chr18	9656771	9656817	(70716468)	+	(AG)n	Simple_repeat	1	47	(0)	1703436
2226	10.6	0.0	1.0	chr18	9656825	9657127	(70716158)	+	AluSz	SINE/Alu	1	300	(12)	1703437
80	22.9	1.4	2.3	chr18	10234091	10234302	(70138983)	+	GA-rich	Low_complexity	1	215	(0)	1704292
159	20.3	2.6	4.2	chr18	10368406	10368437	(70004848)	+	G-rich	Low_complexity	1	472	(0)	1704475
124	26.1	2.8	3.0	chr18	10368438	10368865	(70004420)	+	GA-rich	Low_complexity	1	440	(0)	1704476
24738	6.2	0.3	0.9	chr18	10599605	10602698	(69770587)	C	Harlequin-int	LTR/ERV1	(1770)	5126	2053	1704758
6705	6.8	5.6	3.7	chr18	10602685	10602793	(69770492)	C	Harlequin-int	LTR/ERV1	(5957)	939	864	1704758
49	3.8	7.1	2.2	chr18	10602794	10602878	(69770407)	+	(TC)n	Simple_repeat	1	91	(0)	1704759
6705	8.4	2.9	2.0	chr18	10602879	10603735	(69769550)	C	Harlequin-int	LTR/ERV1	(6033)	863	2	1704758
1611	18.4	15.7	0.6	chr18	11035141	11035301	(69337984)	+	MSTB	LTR/ERVL-MaLR	1	216	(210)	1705316
43	4.5	0.0	0.0	chr18	11035302	11035347	(69337938)	+	(TC)n	Simple_repeat	1	46	(0)	1705317
1611	18.4	15.7	0.6	chr18	11035348	11035546	(69337739)	+	MSTB	LTR/ERVL-MaLR	217	425	(1)	1705316
37	0.0	0.0	0.0	chr18	11143601	11143639	(69229646)	+	(AC)n	Simple_repeat	1	39	(0)	1705467
50	2.2	0.0	0.0	chr18	11143640	11143686	(69229599)	+	(CT)n	Simple_repeat	1	47	(0)	1705468
43	0.0	0.0	0.0	chr18	11178145	11178181	(69195104)	+	(TC)n	Simple_repeat	1	37	(0)	1705514
2453	5.4	2.0	0.3	chr18	11178182	11178475	(69194810)	C	AluYm1	SINE/Alu	(12)	299	1	1705515
1440	27.6	13.5	0.1	chr18	12519603	12520376	(67852909)	+	L1ME4b	LINE/L1	4	889	(3)	1707593
13	12.8	5.6	2.6	chr18	12520553	12520588	(67852697)	+	A-rich	Low_complexity	1	38	(0)	1707594
2256	11.6	0.0	0.0	chr18	12897574	12897866	(67475419)	+	AluSx1	SINE/Alu	1	293	(19)	1708331
52	7.6	0.0	0.0	chr18	12897867	12897935	(67475350)	+	(GA)n	Simple_repeat	1	69	(0)	1708332
302	21.1	1.7	0.0	chr18	12897936	12897992	(67475293)	+	L1MEg	LINE/L1	1883	1940	(4144)	1708333
3450	21.7	10.3	4.8	chr18	21794187	21794442	(58578843)	+	L1M8	LINE/L1	901	1177	(1178)	1713324
35	0.0	0.0	0.0	chr18	21794443	21794472	(58578813)	+	(CT)n	Simple_repeat	1	30	(0)	1713327
3450	21.7	10.3	4.8	chr18	21794473	21795255	(58578030)	+	L1M8	LINE/L1	1178	2023	(332)	1713324
1589	15.0	0.0	12.3	chr18	22010269	22010442	(58362843)	C	AluJr4	SINE/Alu	(11)	301	131	1713733
1887	18.6	0.3	1.0	chr18	22010443	22010462	(58362823)	C	AluJb	SINE/Alu	(2)	310	292	1713734
73	7.4	0.0	1.9	chr18	22010463	22010567	(58362718)	+	(TTTC)n	Simple_repeat	1	105	(0)	1713735
1887	18.6	0.3	1.0	chr18	22010568	22010857	(58362428)	C	AluJb	SINE/Alu	(21)	291	2	1713734
22	18.8	5.1	3.7	chr18	22169335	22169412	(58203873)	+	(CTCCC)n	Simple_repeat	1	82	(0)	1714086
120	29.2	3.0	0.0	chr18	22204077	22204391	(58168894)	+	(TCTC)n	Simple_repeat	1	370	(0)	1714125
23	15.9	0.0	0.0	chr18	22204392	22204435	(58168850)	+	(CTCCC)n	Simple_repeat	1	44	(0)	1714126
39	2.3	2.3	0.0	chr18	22204438	22204481	(58168804)	+	(TCTT)n	Simple_repeat	1	45	(0)	1714127
30	13.7	0.0	0.0	chr18	22212093	22212140	(58161145)	+	(TA)n	Simple_repeat	1	48	(0)	1714147
30	0.0	0.0	0.0	chr18	22212140	22212172	(58161113)	+	(AG)n	Simple_repeat	1	33	(0)	1714148
1128	17.8	3.5	1.9	chr18	22212174	22212403	(58160882)	C	MLT2C2	LTR/ERVL	(20)	547	221	1714146
36	12.0	0.0	0.0	chr18	22229620	22229673	(58143612)	+	(GA)n	Simple_repeat	1	54	(0)	1714191
1533	14.7	1.6	2.4	chr18	22229736	22230020	(58143265)	+	AluJr	SINE/Alu	44	312	(0)	1714192
691	17.3	3.8	0.0	chr18	22342564	22342690	(58030595)	C	FLAM_C	SINE/Alu	(10)	133	2	1714406
228	8.9	6.2	0.0	chr18	23052098	23052142	(57321143)	C	MamGypLTR1d	LTR/Gypsy	(764)	49	2	1715488
38	5.0	0.0	0.0	chr18	23052290	23052331	(57320954)	+	(AG)n	Simple_repeat	1	42	(0)	1715489
279	22.9	17.2	0.0	chr18	23052436	23052531	(57320754)	+	MamRep4096	DNA/hAT-Tip100	311	426	(0)	1715490
9255	23.7	7.9	3.9	chr18	23346420	23347399	(57025886)	C	L1M5	LINE/L1	(1864)	4282	3273	1716018
37	2.4	4.7	0.0	chr18	23347400	23347442	(57025843)	+	(TC)n	Simple_repeat	1	45	(0)	1716023
1733	16.3	2.1	2.1	chr18	23347443	23347724	(57025561)	C	AluJb	SINE/Alu	(30)	282	1	1716024
1572	22.6	7.5	2.4	chr18	23468748	23469265	(56904020)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	35	1716267
79	10.0	4.5	0.0	chr18	23469305	23469459	(56903826)	+	(CT)n	Simple_repeat	1	162	(0)	1716268
14	28.1	0.0	0.0	chr18	23689729	23689771	(56683514)	+	(CTG)n	Simple_repeat	1	43	(0)	1716684
198	27.6	7.2	0.8	chr18	23740615	23740731	(56632554)	+	L3	LINE/CR1	3740	3864	(235)	1716793
2118	19.4	9.9	6.4	chr18	23862665	23863002	(56510283)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	188	1716970
40	2.6	0.0	0.0	chr18	23863003	23863041	(56510244)	+	(GA)n	Simple_repeat	1	39	(0)	1716971
2118	19.4	9.9	6.4	chr18	23863042	23863171	(56510114)	C	MLT1F1	LTR/ERVL-MaLR	(382)	187	72	1716970
2195	11.0	0.0	0.3	chr18	23863172	23863462	(56509823)	+	AluSx1	SINE/Alu	11	300	(12)	1716972
1935	28.6	17.4	7.6	chr18	24246814	24247472	(56125813)	C	L2	LINE/L2	(683)	2736	1924	1717582
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
21	10.5	0.0	0.0	chr18	24689430	24689460	(55683825)	+	(AG)n	Simple_repeat	1	31	(0)	1718347
1577	12.6	11.2	0.0	chr18	25033258	25033496	(55339789)	+	AluSg	SINE/Alu	1	269	(41)	1718847
267	10.5	0.8	0.0	chr18	25033497	25033886	(55339399)	+	(AG)n	Simple_repeat	1	393	(0)	1718848
278	25.0	15.0	0.0	chr18	25033967	25034074	(55339211)	+	MIRb	SINE/MIR	120	246	(22)	1718849
27	10.9	2.0	1.9	chr18	25351924	25351974	(55021311)	+	(GAG)n	Simple_repeat	1	52	(0)	1719216
1287	27.7	7.6	4.2	chr18	25503363	25503935	(54869350)	C	MLT2F	LTR/ERVL	(69)	594	1	1719422
45	6.0	0.0	0.0	chr18	25504018	25504069	(54869216)	+	(TC)n	Simple_repeat	1	52	(0)	1719423
1937	16.0	0.4	0.4	chr18	25835709	25835983	(54537302)	+	AluJb	SINE/Alu	2	276	(36)	1719872
37	0.0	0.0	0.0	chr18	25835987	25836018	(54537267)	+	(TC)n	Simple_repeat	1	32	(0)	1719873
5621	18.2	1.4	7.6	chr18	25836019	25836451	(54536834)	+	L1MD3	LINE/L1	7417	7822	(173)	1719871
72	2.9	0.0	0.0	chr18	25853207	25853276	(54520009)	+	(CT)n	Simple_repeat	1	70	(0)	1719905
73	1.5	0.0	0.0	chr18	26315096	26315162	(54058123)	+	(CT)n	Simple_repeat	1	67	(0)	1720715
28	0.0	0.0	0.0	chr18	26315163	26315193	(54058092)	+	(AC)n	Simple_repeat	1	31	(0)	1720716
233	25.3	9.2	1.2	chr18	26511602	26511681	(53861604)	C	MIRb	SINE/MIR	(103)	165	79	1721039
45	7.3	0.0	0.0	chr18	30071156	30071214	(50302071)	+	(AG)n	Simple_repeat	1	59	(0)	1725841
1394	21.8	7.0	2.9	chr18	30071219	30071559	(50301726)	C	MLT1A0	LTR/ERVL-MaLR	(7)	358	3	1725842
444	26.4	10.7	0.6	chr18	30613144	30613311	(49759974)	+	HERVL40-int	LTR/ERVL	958	1144	(4386)	1726604
80	2.7	0.0	0.0	chr18	30613323	30613399	(49759886)	+	(TC)n	Simple_repeat	1	77	(0)	1726605
27	30.7	1.1	0.0	chr18	31030643	31030732	(49342553)	+	GA-rich	Low_complexity	1	91	(0)	1727119
30	3.5	0.0	0.0	chr18	31170480	31170509	(49202776)	+	(AG)n	Simple_repeat	1	30	(0)	1727307
68	3.0	0.0	0.0	chr18	31226581	31226647	(49146638)	+	(GA)n	Simple_repeat	1	67	(0)	1727400
1114	16.9	17.6	2.4	chr18	31226648	31226740	(49146545)	+	AluJo	SINE/Alu	205	295	(17)	1727399
78	19.2	7.0	0.4	chr18	31360658	31360870	(49012415)	+	(TC)n	Simple_repeat	1	228	(0)	1727578
27	10.8	0.0	0.0	chr18	31480675	31480714	(48892571)	+	(GA)n	Simple_repeat	1	40	(0)	1727728
199	34.3	4.1	3.5	chr18	31480715	31480859	(48892426)	+	L3b	LINE/CR1	4865	5010	(222)	1727729
493	31.4	9.3	5.4	chr18	32085287	32085373	(48287912)	C	LTR33A_	LTR/ERVL	(220)	300	199	1728807
50	0.0	0.0	0.0	chr18	32085374	32085416	(48287869)	+	(AG)n	Simple_repeat	1	43	(0)	1728808
2209	11.8	0.3	0.3	chr18	32085419	32085724	(48287561)	+	AluSq2	SINE/Alu	2	307	(6)	1728809
49	0.0	0.0	0.0	chr18	32093106	32093150	(48280135)	+	(CTCCCGCT)n	Simple_repeat	1	45	(0)	1728828
13286	19.3	1.2	6.3	chr18	32601732	32601883	(47771402)	C	L1MA3	LINE/L1	(1104)	6455	6371	1729620
1943	13.8	4.2	2.0	chr18	32601884	32602188	(47771097)	C	AluSp	SINE/Alu	(1)	312	1	1729623
1165	31.4	8.6	10.1	chr18	32732805	32734130	(47639155)	+	MLT1I-int	LTR/ERVL-MaLR	74	1377	(10)	1729806
588	32.5	6.2	2.3	chr18	32759433	32759649	(47613636)	C	MIRb	SINE/MIR	(8)	260	35	1729849
33	0.0	0.0	0.0	chr18	32759698	32759725	(47613560)	+	(TC)n	Simple_repeat	1	28	(0)	1729850
28	11.9	2.0	2.0	chr18	32772866	32772914	(47600371)	+	GA-rich	Low_complexity	1	50	(0)	1729868
1892	9.2	13.7	1.8	chr18	33186928	33187086	(47186199)	C	THE1D	LTR/ERVL-MaLR	(0)	381	212	1730397
38	4.9	0.0	0.0	chr18	33187087	33187128	(47186157)	+	(GA)n	Simple_repeat	1	42	(0)	1730398
1892	9.2	13.7	1.8	chr18	33187129	33187301	(47185984)	C	THE1D	LTR/ERVL-MaLR	(170)	211	4	1730397
488	34.6	2.4	5.8	chr18	33187302	33187352	(47185933)	+	MLT2E	LTR/ERVL	197	250	(378)	1730396
1630	17.7	2.1	4.3	chr18	33194782	33194918	(47178367)	+	AluJo	SINE/Alu	1	133	(179)	1730408
47	4.2	0.0	0.0	chr18	33194919	33194967	(47178318)	+	(AG)n	Simple_repeat	1	49	(0)	1730409
1630	17.7	2.1	4.3	chr18	33194968	33195128	(47178157)	+	AluJo	SINE/Alu	134	292	(20)	1730408
363	27.8	11.1	7.4	chr18	33804449	33804638	(46568647)	+	MIR	SINE/MIR	54	251	(11)	1731151
482	30.9	9.3	5.9	chr18	34117108	34117344	(46255941)	C	MIR	SINE/MIR	(12)	250	5	1731534
3270	22.2	6.1	2.9	chr18	34202805	34203635	(46169650)	+	L1MD2	LINE/L1	5500	6358	(1)	1731635
50	4.0	0.0	0.0	chr18	34203667	34203718	(46169567)	+	(TC)n	Simple_repeat	1	52	(0)	1731636
31	0.0	0.0	0.0	chr18	34203719	34203752	(46169533)	+	(AC)n	Simple_repeat	1	34	(0)	1731637
78	10.7	0.8	1.6	chr18	34381602	34381725	(45991560)	+	(AG)n	Simple_repeat	1	125	(0)	1731874
57	0.0	0.0	0.0	chr18	35168833	35168881	(45204404)	+	(AG)n	Simple_repeat	1	49	(0)	1732931
735	23.3	3.3	0.1	chr18	35567900	35568092	(44805193)	C	MLT1B	LTR/ERVL-MaLR	(10)	380	173	1733524
41	4.0	1.9	0.0	chr18	35568093	35568144	(44805141)	+	(AG)n	Simple_repeat	1	53	(0)	1733525
268	18.6	10.7	0.2	chr18	35616847	35616926	(44756359)	+	MIR	SINE/MIR	107	199	(69)	1733591
204	19.7	3.1	0.6	chr18	35957512	35957969	(44415316)	+	A-rich	Low_complexity	1	472	(0)	1734038
2816	23.2	11.5	7.9	chr18	35957970	35958647	(44414638)	+	L1ME2z	LINE/L1	4152	4771	(1375)	1734035
44	0.0	0.0	0.0	chr18	36664778	36664815	(43708470)	+	(GA)n	Simple_repeat	1	38	(0)	1735072
1421	15.7	15.0	0.0	chr18	36664855	36665103	(43708182)	+	AluJr	SINE/Alu	1	293	(19)	1735073
103	20.9	3.0	1.8	chr18	37565666	37565932	(42807353)	+	(TC)n	Simple_repeat	1	275	(0)	1736226
1798	15.4	11.2	4.7	chr18	37934246	37934432	(42438853)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	218	1736714
73	1.4	1.4	0.0	chr18	37934433	37934502	(42438783)	+	(AG)n	Simple_repeat	1	71	(0)	1736715
1798	15.4	11.2	4.7	chr18	37934503	37934715	(42438570)	C	MSTB1	LTR/ERVL-MaLR	(215)	217	4	1736714
987	27.1	5.7	5.7	chr18	42709669	42710137	(37663148)	+	MLT1F1	LTR/ERVL-MaLR	114	551	(18)	1743191
57	33.0	2.6	0.8	chr18	44742937	44743168	(35630117)	+	(CTCT)n	Simple_repeat	1	238	(0)	1745895
14	13.6	0.0	5.6	chr18	44773652	44773687	(35599598)	+	(AACA)n	Simple_repeat	1	36	(0)	1745934
41	2.5	0.0	0.0	chr18	44773794	44773833	(35599452)	+	(CT)n	Simple_repeat	1	40	(0)	1745935
38	0.0	0.0	0.0	chr18	44773839	44773871	(35599414)	+	(TG)n	Simple_repeat	1	33	(0)	1745936
459	34.5	3.2	9.9	chr18	44780610	44781304	(35591981)	C	L2b	LINE/L2	(0)	3375	2743	1745948
46	5.9	0.0	0.0	chr18	44781449	44781501	(35591784)	+	(CT)n	Simple_repeat	1	53	(0)	1745949
267	27.6	2.6	0.4	chr18	44781536	44781634	(35591651)	+	L2a	LINE/L2	3276	3426	(0)	1745950
404	30.7	8.4	6.8	chr18	44946684	44946917	(35426368)	C	L2a	LINE/L2	(0)	3426	3189	1746185
41	2.4	2.3	0.0	chr18	46765105	46765147	(33608138)	+	(CT)n	Simple_repeat	1	44	(0)	1749217
792	24.8	5.9	11.2	chr18	47314370	47314509	(33058776)	+	MLT1B	LTR/ERVL-MaLR	22	173	(217)	1749997
76	6.0	9.5	0.0	chr18	47314510	47314667	(33058618)	+	(TC)n	Simple_repeat	1	173	(0)	1749998
792	24.8	5.9	11.2	chr18	47314668	47314830	(33058455)	+	MLT1B	LTR/ERVL-MaLR	174	308	(82)	1749997
111	28.9	2.3	3.0	chr18	47982449	47982844	(32390441)	+	G-rich	Low_complexity	1	405	(0)	1751109
1065	13.2	7.0	1.1	chr18	47982855	47983030	(32390255)	C	THE1D	LTR/ERVL-MaLR	(188)	187	1	1751108
13	11.6	0.0	6.2	chr18	48161947	48161978	(32211307)	+	(GGCCC)n	Simple_repeat	1	32	(0)	1751435
55	0.0	0.0	0.0	chr18	48389190	48389236	(31984049)	+	(CT)n	Simple_repeat	1	47	(0)	1751824
49	0.0	0.0	0.0	chr18	48389237	48389278	(31984007)	+	(GT)n	Simple_repeat	1	42	(0)	1751825
395	31.9	10.6	1.4	chr18	48389345	48389566	(31983719)	+	MIRb	SINE/MIR	3	256	(12)	1751826
15	22.0	2.0	2.0	chr18	48539845	48539893	(31833392)	+	G-rich	Low_complexity	1	50	(0)	1752079
1797	26.1	4.8	4.8	chr18	48728382	48728924	(31644361)	C	MLT1F	LTR/ERVL-MaLR	(0)	560	18	1752359
14	12.3	5.4	2.6	chr18	48828892	48828928	(31544357)	+	(CCT)n	Simple_repeat	1	39	(0)	1752501
204	19.1	2.1	2.1	chr18	48842335	48842382	(31530903)	C	MIRc	SINE/MIR	(85)	183	136	1752521
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
12	27.0	3.6	1.8	chr18	48914758	48914812	(31458473)	+	(CCAGC)n	Simple_repeat	1	57	(0)	1752667
42	7.8	0.0	0.0	chr18	48929517	48929570	(31443715)	+	(TC)n	Simple_repeat	1	54	(0)	1752689
46	0.0	0.0	0.0	chr18	49097875	49097913	(31275372)	+	(CT)n	Simple_repeat	1	39	(0)	1752951
59	3.5	0.0	0.0	chr18	49258782	49258840	(31114445)	+	(AC)n	Simple_repeat	1	59	(0)	1753192
43	2.0	0.0	0.0	chr18	49258841	49258889	(31114396)	+	(AG)n	Simple_repeat	1	49	(0)	1753193
13	9.3	0.0	0.0	chr18	49258888	49258910	(31114375)	+	(AGGC)n	Simple_repeat	1	23	(0)	1753194
16	9.8	0.0	0.0	chr18	49258975	49258996	(31114289)	+	(A)n	Simple_repeat	1	22	(0)	1753195
13	16.1	0.0	0.0	chr18	49258997	49259002	(31114283)	+	(AACA)n	Simple_repeat	1	28	(0)	1753196
54	0.0	0.0	0.0	chr18	49317552	49317597	(31055688)	+	(TC)n	Simple_repeat	1	46	(0)	1753303
24	0.0	3.1	0.0	chr18	49317598	49317631	(31055654)	+	(CCCT)n	Simple_repeat	1	35	(0)	1753304
1779	12.8	0.3	7.3	chr18	49460833	49461145	(30912140)	+	AluSc	SINE/Alu	2	292	(17)	1753566
281	29.2	1.1	0.0	chr18	49465178	49465266	(30908019)	+	L3	LINE/CR1	3910	3999	(100)	1753575
13	16.9	3.0	0.0	chr18	49486986	49487018	(30886267)	+	G-rich	Low_complexity	1	34	(0)	1753633
1679	17.6	5.6	0.8	chr18	49558263	49558431	(30814854)	+	MLT1A	LTR/ERVL-MaLR	2	187	(187)	1753796
50	0.0	2.2	0.0	chr18	49558432	49558477	(30814808)	+	(TC)n	Simple_repeat	1	47	(0)	1753797
1679	17.6	5.6	0.8	chr18	49558478	49558662	(30814623)	+	MLT1A	LTR/ERVL-MaLR	188	373	(1)	1753796
3076	13.6	1.6	1.4	chr18	49911311	49911794	(30461491)	+	LTR22B	LTR/ERVK	5	489	(3)	1754365
207	26.2	4.8	2.4	chr18	50069027	50069108	(30304177)	C	MIRb	SINE/MIR	(100)	168	85	1754582
256	31.3	0.9	11.5	chr18	50647968	50648097	(29725188)	C	L2c	LINE/L2	(5)	3382	3267	1755489
35	0.0	0.0	0.0	chr18	50648100	50648129	(29725156)	+	(AG)n	Simple_repeat	1	30	(0)	1755490
253	29.6	3.0	0.0	chr18	50748446	50748543	(29624742)	C	LTR88b	LTR/Gypsy?	(733)	104	4	1755676
48	0.0	0.0	0.0	chr18	50756833	50756873	(29616412)	+	(AC)n	Simple_repeat	1	41	(0)	1755691
60	8.8	1.2	0.0	chr18	50756874	50756958	(29616327)	+	(GA)n	Simple_repeat	1	86	(0)	1755692
695	28.7	12.4	0.8	chr18	50756984	50757239	(29616046)	+	LTR16E2	LTR/ERVL	279	568	(0)	1755693
50	2.2	0.0	0.0	chr18	52474207	52474253	(27899032)	+	(AG)n	Simple_repeat	1	47	(0)	1758492
492	38.2	4.2	0.7	chr18	52969027	52969437	(27403848)	+	L2	LINE/L2	2169	2594	(825)	1759186
49	10.3	0.0	0.0	chr18	52969585	52969657	(27403628)	+	(CT)n	Simple_repeat	1	73	(0)	1759187
188	32.0	2.4	12.6	chr18	54957418	54957560	(25415725)	+	L2b	LINE/L2	3248	3375	(0)	1762016
15	0.0	0.0	0.0	chr18	54957611	54957627	(25415658)	+	(AC)n	Simple_repeat	1	17	(0)	1762017
36	0.0	0.0	0.0	chr18	54957628	54957658	(25415627)	+	(CT)n	Simple_repeat	1	31	(0)	1762018
328	21.6	1.8	4.3	chr18	54957660	54957775	(25415510)	+	Charlie23a	DNA/hAT-Charlie	137	249	(90)	1762019
32	10.8	0.0	0.0	chr18	55096557	55096606	(25276679)	+	(TC)n	Simple_repeat	1	50	(0)	1762215
43	4.5	0.0	0.0	chr18	55096612	55096657	(25276628)	+	(CA)n	Simple_repeat	1	46	(0)	1762216
353	23.0	3.0	4.4	chr18	55190509	55190713	(25182572)	C	L1MEi	LINE/L1	(1209)	1003	802	1762352
30	0.0	0.0	0.0	chr18	55190722	55190754	(25182531)	+	(TG)n	Simple_repeat	1	33	(0)	1762353
41	4.7	0.0	0.0	chr18	55190755	55190798	(25182487)	+	(GA)n	Simple_repeat	1	44	(0)	1762354
1730	15.0	4.2	0.0	chr18	55190814	55191066	(25182219)	C	AluJb	SINE/Alu	(48)	264	1	1762355
295	19.8	10.0	1.2	chr18	55399730	55399811	(24973474)	C	MER5B	DNA/hAT-Charlie	(11)	167	78	1762619
42	9.3	0.0	0.0	chr18	55399823	55399880	(24973405)	+	(CT)n	Simple_repeat	1	58	(0)	1762620
31	11.5	0.0	0.0	chr18	55585862	55585908	(24787377)	+	(CT)n	Simple_repeat	1	47	(0)	1762863
18	8.7	0.0	0.0	chr18	55694952	55694976	(24678309)	+	(CT)n	Simple_repeat	1	25	(0)	1763057
31	0.0	0.0	0.0	chr18	55694977	55695005	(24678280)	+	(TCTA)n	Simple_repeat	1	29	(0)	1763058
16	14.9	0.0	0.0	chr18	55695028	55695058	(24678227)	+	(AGAAAG)n	Simple_repeat	1	31	(0)	1763059
32	3.2	0.0	0.0	chr18	55695086	55695117	(24678168)	+	(AG)n	Simple_repeat	1	32	(0)	1763060
47	11.6	0.0	0.0	chr18	56289852	56289926	(24083359)	+	(TCTC)n	Simple_repeat	1	75	(0)	1763880
261	30.6	6.8	7.4	chr18	56386503	56386798	(23986487)	C	L2b	LINE/L2	(0)	3426	3135	1764018
4183	5.2	0.4	0.2	chr18	57313934	57314448	(23058837)	+	L1PA7	LINE/L1	5633	6148	(6)	1765385
57	1.9	0.0	0.0	chr18	57314449	57314501	(23058784)	+	(AG)n	Simple_repeat	1	53	(0)	1765386
256	32.0	4.8	1.0	chr18	57844876	57844976	(22528309)	+	MLT1O	LTR/ERVL-MaLR	103	207	(335)	1766297
51	2.1	0.0	0.0	chr18	57845022	57845069	(22528216)	+	(GA)n	Simple_repeat	1	48	(0)	1766298
228	26.3	8.4	0.0	chr18	57845108	57845183	(22528102)	+	MLT1O	LTR/ERVL-MaLR	433	515	(27)	1766297
28	20.4	0.0	0.0	chr18	58310009	58310070	(22063215)	+	(CTCGCT)n	Simple_repeat	1	62	(0)	1767106
678	21.7	2.8	1.4	chr18	58692303	58692407	(21680878)	+	Tigger1	DNA/TcMar-Tigger	238	342	(2076)	1767676
38	2.8	0.0	0.0	chr18	58692408	58692444	(21680841)	+	(CT)n	Simple_repeat	1	37	(0)	1767677
678	21.7	2.8	1.4	chr18	58692445	58692478	(21680807)	+	Tigger1	DNA/TcMar-Tigger	343	379	(2039)	1767676
770	12.5	0.0	0.9	chr18	58692479	58692591	(21680694)	+	Tigger1	DNA/TcMar-Tigger	341	452	(1966)	1767678
1411	13.1	15.9	0.4	chr18	58764592	58764835	(21608450)	C	AluJo	SINE/Alu	(22)	290	2	1767804
1943	11.7	2.6	0.0	chr18	58806247	58806512	(21566773)	C	AluSp	SINE/Alu	(22)	291	19	1767896
24	11.2	2.6	0.0	chr18	58806524	58806581	(21566704)	+	(TC)n	Simple_repeat	1	59	(0)	1767897
2548	6.2	0.7	0.3	chr18	58806582	58806886	(21566399)	C	AluY	SINE/Alu	(5)	306	1	1767898
1312	12.9	5.0	0.0	chr18	59054756	59054964	(21318321)	C	MLT1B	LTR/ERVL-MaLR	(170)	220	1	1768364
1576	27.0	13.1	1.3	chr18	59079429	59080033	(21293252)	C	ERVL-E-int	LTR/ERVL	(1648)	4019	3333	1768413
685	27.8	15.7	7.9	chr18	59192103	59192238	(21181047)	+	MLT1F	LTR/ERVL-MaLR	42	181	(414)	1768582
34	4.3	4.0	1.9	chr18	59192239	59192288	(21180997)	+	(TC)n	Simple_repeat	1	52	(0)	1768583
1669	25.2	0.6	2.2	chr18	59192289	59192658	(21180627)	+	MLT1F	LTR/ERVL-MaLR	182	594	(1)	1768582
1922	16.8	3.4	10.7	chr18	59211659	59212008	(21161277)	+	MLT2D	LTR/ERVL	1	359	(55)	1768616
44	7.6	0.0	0.0	chr18	59212009	59212064	(21161221)	+	(TC)n	Simple_repeat	1	56	(0)	1768617
1922	16.8	3.4	10.7	chr18	59212065	59212161	(21161124)	+	MLT2D	LTR/ERVL	360	414	(0)	1768616
33	0.0	0.0	0.0	chr18	59803613	59803640	(20569645)	+	(CT)n	Simple_repeat	1	28	(0)	1769522
1764	17.0	3.7	0.3	chr18	59803641	59803929	(20569356)	C	AluJr	SINE/Alu	(13)	299	1	1769523
1001	23.1	4.3	4.2	chr18	60251432	60251800	(20121485)	+	MSTD	LTR/ERVL-MaLR	85	462	(3)	1770290
35	0.0	0.0	0.0	chr18	61088928	61088965	(19284320)	+	(GA)n	Simple_repeat	1	38	(0)	1771413
51	0.0	0.0	0.0	chr18	61088966	61089009	(19284276)	+	(GT)n	Simple_repeat	1	44	(0)	1771414
53	3.9	0.0	0.0	chr18	61584082	61584135	(18789150)	+	(GA)n	Simple_repeat	1	54	(0)	1772136
398	23.1	0.0	14.3	chr18	61584136	61584186	(18789099)	+	MLT2C2	LTR/ERVL	452	501	(58)	1772133
41	0.0	0.0	0.0	chr18	61584187	61584221	(18789064)	+	(TC)n	Simple_repeat	1	35	(0)	1772137
398	23.1	0.0	14.3	chr18	61584222	61584295	(18788990)	+	MLT2C2	LTR/ERVL	502	559	(0)	1772133
62	20.0	2.2	0.7	chr18	61829477	61829615	(18543670)	+	GA-rich	Low_complexity	1	142	(0)	1772520
204	31.2	9.9	1.5	chr18	62584708	62584837	(17788448)	C	MIRc	SINE/MIR	(22)	246	105	1773663
373	16.9	6.7	2.4	chr18	62710541	62710625	(17662660)	C	MER135	DNA	(64)	164	76	1773926
13	24.3	0.0	8.1	chr18	62715590	62715651	(17657634)	+	(CCG)n	Simple_repeat	1	62	(0)	1773932
15	13.9	0.0	0.0	chr18	62725606	62725629	(17647656)	+	(CT)n	Simple_repeat	1	24	(0)	1773943
17	5.0	0.0	0.0	chr18	62725637	62725657	(17647628)	+	(AG)n	Simple_repeat	1	21	(0)	1773944
15	5.6	0.0	0.0	chr18	62863047	62863065	(17510220)	+	(T)n	Simple_repeat	1	19	(0)	1774181
675	9.6	0.9	0.9	chr18	62863066	62863170	(17510115)	C	MER41A	LTR/ERV1	(88)	466	362	1774182
18	3.7	7.1	0.0	chr18	62863171	62863198	(17510087)	+	(CT)n	Simple_repeat	1	30	(0)	1774183
1964	13.8	3.5	1.0	chr18	62863199	62863502	(17509783)	C	AluSz	SINE/Alu	(0)	312	1	1774184
66	18.6	5.3	0.0	chr18	63055253	63055404	(17317881)	+	(CT)n	Simple_repeat	1	160	(0)	1774480
43	11.6	0.0	0.0	chr18	63070271	63070335	(17302950)	+	(AG)n	Simple_repeat	1	65	(0)	1774505
1894	8.4	10.4	3.2	chr18	63302042	63302325	(17070960)	+	AluSq	SINE/Alu	1	307	(6)	1774853
16	4.3	3.9	3.7	chr18	63302326	63302342	(17070943)	+	(AG)n	Simple_repeat	2	18	(0)	1774854
69	2.9	0.0	0.0	chr18	63331271	63331341	(17041944)	+	(AGAGAGAC)n	Simple_repeat	1	71	(0)	1774887
27	0.0	0.0	0.0	chr18	63367331	63367356	(17005929)	+	(CCGCCA)n	Simple_repeat	1	26	(0)	1774950
35	14.2	0.0	0.0	chr18	63472503	63472564	(16900721)	+	(AGAG)n	Simple_repeat	1	62	(0)	1775142
1490	19.0	0.0	7.5	chr18	65709504	65709708	(14663577)	+	AluJr	SINE/Alu	76	273	(39)	1778147
50	2.2	0.0	0.0	chr18	65709709	65709755	(14663530)	+	(CT)n	Simple_repeat	1	47	(0)	1778149
23	0.0	0.0	0.0	chr18	65709756	65709780	(14663505)	+	(AC)n	Simple_repeat	1	25	(0)	1778150
30	10.7	1.8	3.6	chr18	65776350	65776361	(14596924)	+	GA-rich	Low_complexity	1	11	(0)	1778240
48	0.0	0.0	0.0	chr18	65776362	65776402	(14596883)	+	(AC)n	Simple_repeat	1	41	(0)	1778241
30	10.7	1.8	3.6	chr18	65776403	65776444	(14596841)	+	GA-rich	Low_complexity	12	54	(0)	1778242
413	22.2	8.3	7.1	chr18	65906494	65906648	(14466637)	C	MER67C	LTR/ERV1	(0)	514	358	1778421
1796	15.9	3.7	3.0	chr18	65906660	65907060	(14466225)	C	MER67C	LTR/ERV1	(306)	405	2	1778421
1431	22.7	6.0	7.2	chr18	70319439	70319993	(10053292)	+	Charlie1a	DNA/hAT-Charlie	80	627	(828)	1784401
103	22.8	3.2	2.2	chr18	75139858	75140179	(5233106)	+	(TGTCTC)n	Simple_repeat	1	325	(0)	1790672
236	31.1	11.3	9.3	chr18	75140180	75140270	(5233015)	+	L2c	LINE/L2	2918	3028	(347)	1790673
37	0.0	0.0	0.0	chr18	75140271	75140302	(5232983)	+	(CA)n	Simple_repeat	1	32	(0)	1790674
54	0.0	1.9	1.8	chr18	75394080	75394133	(4979152)	+	(TC)n	Simple_repeat	1	55	(0)	1790957
54	4.5	2.8	1.4	chr18	75463291	75463361	(4909924)	+	(CT)n	Simple_repeat	1	73	(0)	1791031
296	12.1	6.8	0.8	chr18	76567141	76567265	(3806020)	C	HERV17-int	LTR/ERV1	(7783)	843	711	1792298
34	16.0	0.0	0.0	chr18	76567279	76567341	(3805944)	+	(TCTCTC)n	Simple_repeat	1	63	(0)	1792299
12	23.6	0.0	9.2	chr18	79069339	79069403	(1303882)	+	G-rich	Low_complexity	1	65	(0)	1795141
206	14.8	2.7	3.0	chr18	79424465	79424913	(948372)	+	(GTCTCT)n	Simple_repeat	1	461	(0)	1795489
320	23.4	2.3	3.6	chr18	79424916	79425328	(947957)	C	HERVIP10FH-int	LTR/ERV1	(4089)	1013	723	1795490
353	30.3	9.8	6.8	chr18	79536561	79537002	(836283)	C	L1MEd	LINE/L1	(1311)	1196	804	1795547
12	9.7	0.0	0.0	chr18	80109933	80109954	(263331)	+	(CCCG)n	Simple_repeat	1	22	(0)	1796149
12	15.3	3.5	0.0	chr19	461976	462004	(58155612)	+	G-rich	Low_complexity	1	30	(0)	1796955
12	15.7	2.6	5.0	chr19	462094	462132	(58155484)	+	(CGCGGT)n	Simple_repeat	1	40	(0)	1796956
1436	4.8	0.0	0.0	chr19	570872	571038	(58046578)	+	AluSx	SINE/Alu	111	277	(35)	1797171
999	17.8	9.8	1.5	chr19	571083	571344	(58046272)	+	LTR10B	LTR/ERV1	16	301	(204)	1797172
1045	12.1	0.0	2.0	chr19	847320	847436	(57770180)	+	AluSx3	SINE/Alu	165	281	(30)	1797745
31	0.0	0.0	2.9	chr19	847437	847470	(57770146)	+	(AAACA)n	Simple_repeat	1	34	(0)	1797746
1045	12.1	0.0	2.0	chr19	847471	847501	(57770115)	+	AluSx3	SINE/Alu	282	310	(1)	1797745
58	7.9	5.2	0.0	chr19	847502	847597	(57770019)	+	(GAAA)n	Simple_repeat	1	101	(0)	1797747
1890	18.3	0.0	0.0	chr19	1179670	1179964	(57437652)	C	AluJb	SINE/Alu	(17)	295	1	1798335
109	7.4	0.0	1.3	chr19	1179967	1180115	(57437501)	+	(TTTC)n	Simple_repeat	1	149	(0)	1798336
888	14.5	0.0	0.0	chr19	1180116	1180239	(57437377)	C	AluJr	SINE/Alu	(188)	124	1	1798337
12	13.9	6.2	0.0	chr19	1249461	1249492	(57368124)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1798466
226	32.6	4.3	0.0	chr19	1315683	1315771	(57301845)	+	MIR	SINE/MIR	45	137	(125)	1798556
2131	10.4	0.0	6.0	chr19	1403005	1403322	(57214294)	C	AluSc8	SINE/Alu	(8)	303	5	1798735
603	21.1	0.8	0.7	chr19	1403489	1403631	(57213985)	+	FLAM_C	SINE/Alu	6	141	(161)	1798736
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
2365	10.5	0.0	1.0	chr19	1501581	1501893	(57115723)	C	AluSx	SINE/Alu	(1)	311	2	1798888
247	15.2	6.9	2.8	chr19	1669504	1669539	(56948077)	+	(CTTCC)n	Simple_repeat	1	37	(0)	1799246
65	3.2	0.0	0.0	chr19	1669540	1669603	(56948013)	+	(CT)n	Simple_repeat	1	64	(0)	1799247
247	15.2	6.9	2.8	chr19	1669604	1670237	(56947379)	+	(CTTCC)n	Simple_repeat	2	661	(0)	1799248
2096	8.4	5.5	4.8	chr19	1670246	1670414	(56947202)	C	AluSq	SINE/Alu	(2)	311	147	1799249
231	24.7	2.4	0.9	chr19	1678118	1678756	(56938860)	+	(TC)n	Simple_repeat	1	654	(0)	1799268
257	20.4	6.4	0.9	chr19	1700871	1701092	(56916524)	C	HERVIP10FH-int	LTR/ERV1	(4089)	1013	779	1799329
71	16.1	4.0	2.2	chr19	1701093	1701265	(56916351)	+	(TCTGTC)n	Simple_repeat	1	180	(0)	1799330
41	18.4	0.0	0.0	chr19	1779385	1779465	(56838151)	+	GA-rich	Low_complexity	1	81	(0)	1799501
829	23.5	2.3	2.7	chr19	1859796	1860014	(56757602)	+	MER20	DNA/hAT-Charlie	2	219	(0)	1799634
23	24.6	2.7	2.6	chr19	1905578	1905652	(56711964)	+	(CG)n	Simple_repeat	1	77	(0)	1799732
297	17.3	0.0	0.0	chr19	1936853	1936904	(56680712)	+	Alu	SINE/Alu	245	296	(5)	1799798
38	19.2	2.4	1.1	chr19	1936908	1936992	(56680624)	+	GA-rich	Low_complexity	1	87	(0)	1799799
13	14.0	4.7	4.4	chr19	1940696	1940738	(56676878)	+	(CGCCGC)n	Simple_repeat	1	45	(0)	1799810
2142	10.1	0.0	0.4	chr19	2027201	2027478	(56590138)	+	AluSx1	SINE/Alu	1	277	(35)	1799989
27	15.5	0.0	0.0	chr19	2027479	2027528	(56590088)	+	GA-rich	Low_complexity	1	50	(0)	1799990
558	24.0	11.9	0.0	chr19	2027529	2027699	(56589917)	+	L1MD2	LINE/L1	6164	6357	(2)	1799991
2230	11.2	2.6	0.0	chr19	2239083	2239386	(56378230)	+	AluSx	SINE/Alu	1	312	(0)	1800389
325	32.5	12.5	5.4	chr19	2239387	2239926	(56377690)	C	HAL1	LINE/L1	(940)	1567	992	1800388
13	17.7	3.1	0.0	chr19	2328712	2328743	(56288873)	+	(GGC)n	Simple_repeat	1	33	(0)	1800571
83	14.8	1.3	0.7	chr19	2379607	2379755	(56237861)	+	(CTTT)n	Simple_repeat	1	151	(0)	1800655
1453	18.0	7.7	2.7	chr19	2379757	2380050	(56237566)	C	AluJb	SINE/Alu	(1)	311	2	1800656
40	7.8	0.0	0.0	chr19	2514952	2515005	(56102611)	+	(GA)n	Simple_repeat	1	54	(0)	1800988
124	21.8	0.9	3.4	chr19	2651224	2651542	(55966074)	+	(CTTC)n	Simple_repeat	1	322	(0)	1801339
48	25.0	2.5	3.0	chr19	2651409	2651555	(55966061)	+	(CTTT)n	Simple_repeat	1	147	(0)	1801340
2090	16.4	0.7	0.0	chr19	2651556	2651865	(55965751)	C	AluSx1	SINE/Alu	(0)	312	1	1801341
2341	10.1	1.3	0.0	chr19	2695877	2696184	(55921432)	+	AluSx	SINE/Alu	1	312	(0)	1801469
132	12.8	2.4	4.7	chr19	2696185	2696453	(55921163)	+	A-rich	Low_complexity	23	282	(0)	1801470
13	31.8	0.0	1.8	chr19	2841855	2841910	(55775706)	+	(CCCCG)n	Simple_repeat	1	56	(0)	1801762
2187	10.1	0.0	0.3	chr19	2945533	2945829	(55671787)	+	AluSq	SINE/Alu	1	296	(17)	1801971
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
52	19.2	0.8	3.9	chr19	3228108	3228234	(55389382)	+	GA-rich	Low_complexity	1	128	(0)	1802683
46	0.0	0.0	0.0	chr19	3314381	3314419	(55303197)	+	(CA)n	Simple_repeat	1	39	(0)	1802907
56	4.3	4.2	0.0	chr19	3314510	3314581	(55303035)	+	(CT)n	Simple_repeat	1	75	(0)	1802908
42	30.4	5.0	1.3	chr19	3366345	3366566	(55251050)	+	G-rich	Low_complexity	1	233	(0)	1803067
130	29.7	2.1	2.4	chr19	3368949	3369416	(55248200)	+	(TCTCTC)n	Simple_repeat	1	467	(0)	1803077
20	26.2	1.5	2.9	chr19	3370333	3370399	(55247217)	+	(CT)n	Simple_repeat	1	68	(0)	1803080
123	21.5	2.8	0.0	chr19	3370477	3370763	(55246853)	+	(TCTC)n	Simple_repeat	1	295	(0)	1803081
65	8.1	1.0	1.0	chr19	3371861	3371881	(55245735)	+	(TC)n	Simple_repeat	1	22	(0)	1803086
76	5.9	0.0	0.0	chr19	3371882	3371971	(55245645)	+	(TCCT)n	Simple_repeat	1	90	(0)	1803087
65	8.1	1.0	1.0	chr19	3371972	3372042	(55245574)	+	(TC)n	Simple_repeat	1	71	(0)	1803088
2346	6.5	0.0	0.0	chr19	3372043	3372320	(55245296)	C	AluSx	SINE/Alu	(34)	278	1	1803089
25	16.2	5.5	0.0	chr19	3688723	3688777	(54928839)	+	GA-rich	Low_complexity	1	58	(0)	1803784
23	15.4	6.5	1.5	chr19	3870504	3870565	(54747051)	+	GA-rich	Low_complexity	1	66	(0)	1804202
1050	22.2	1.3	0.0	chr19	3870566	3870786	(54746830)	+	L1MC3	LINE/L1	7013	7236	(549)	1804203
25	22.2	1.3	3.9	chr19	3947501	3947563	(54670053)	+	(TTCT)n	Simple_repeat	1	63	(0)	1804410
2294	9.5	0.6	1.9	chr19	3947564	3947879	(54669737)	C	AluSx	SINE/Alu	(0)	312	1	1804411
1779	15.3	0.0	0.8	chr19	4005379	4005640	(54611976)	+	AluSq2	SINE/Alu	54	313	(0)	1804547
12	15.0	8.1	0.0	chr19	4005641	4005677	(54611939)	+	A-rich	Low_complexity	1	40	(0)	1804548
524	26.0	1.4	0.0	chr19	4005692	4005837	(54611779)	C	LTR54	LTR/ERV1	(349)	161	14	1804544
1011	11.0	0.0	6.5	chr19	4005839	4005993	(54611623)	C	AluJo	SINE/Alu	(45)	267	123	1804549
26	6.2	0.0	0.0	chr19	4046397	4046430	(54571186)	+	(GCTCTC)n	Simple_repeat	1	34	(0)	1804609
17	8.8	0.0	0.0	chr19	4046433	4046456	(54571160)	+	(T)n	Simple_repeat	1	24	(0)	1804610
2432	10.2	0.0	0.3	chr19	4155736	4156048	(54461568)	C	AluSq2	SINE/Alu	(1)	312	1	1804897
69	8.1	0.0	1.1	chr19	4156055	4156149	(54461467)	+	(TC)n	Simple_repeat	1	95	(0)	1804898
17	8.0	0.0	0.0	chr19	4156151	4156177	(54461439)	+	(CCCT)n	Simple_repeat	1	27	(0)	1804899
2210	12.3	0.3	0.7	chr19	4156178	4156485	(54461131)	C	AluSp	SINE/Alu	(5)	308	2	1804900
69	35.1	0.7	0.4	chr19	4179305	4179575	(54438041)	+	GA-rich	Low_complexity	1	273	(0)	1804957
18	23.8	1.8	1.8	chr19	4402651	4402706	(54214910)	+	(GCG)n	Simple_repeat	1	57	(0)	1805516
275	33.2	13.5	0.8	chr19	4414529	4414780	(54202836)	C	L1ME3G	LINE/L1	(220)	704	416	1805540
1294	11.9	0.0	1.6	chr19	4610842	4611026	(54006590)	+	AluSx1	SINE/Alu	130	311	(1)	1806006
48	35.0	1.5	0.5	chr19	4611034	4611239	(54006377)	+	GA-rich	Low_complexity	1	209	(0)	1806007
690	15.4	0.0	0.4	chr19	4634300	4634427	(53983189)	+	FLAM_C	SINE/Alu	1	220	(82)	1806075
269	28.6	6.2	6.7	chr19	4634322	4634516	(53983100)	C	SVA_A	Retroposon/SVA	(1193)	194	1	1806076
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1505	10.8	0.0	21.0	chr19	4725113	4725493	(53892123)	C	AluJr	SINE/Alu	(11)	301	1	1806269
1469	21.1	5.1	1.1	chr19	4733673	4733839	(53883777)	+	AluJo	SINE/Alu	128	301	(11)	1806292
118	17.1	3.4	1.8	chr19	4733843	4734106	(53883510)	+	GA-rich	Low_complexity	1	273	(0)	1806294
2197	10.3	0.0	0.0	chr19	4765910	4766217	(53851399)	C	AluSx3	SINE/Alu	(0)	311	1	1806400
62	0.0	0.0	0.0	chr19	4766236	4766288	(53851328)	+	(TC)n	Simple_repeat	1	53	(0)	1806401
2031	12.3	0.0	0.0	chr19	4766294	4766562	(53851054)	C	AluSq2	SINE/Alu	(26)	287	19	1806402
1685	12.7	11.3	0.4	chr19	4767979	4768119	(53849497)	C	AluJr	SINE/Alu	(21)	291	118	1806408
50	9.3	0.0	0.0	chr19	4768120	4768189	(53849427)	+	(TC)n	Simple_repeat	1	70	(0)	1806409
1685	12.7	11.3	0.4	chr19	4768190	4768306	(53849310)	C	AluJr	SINE/Alu	(195)	117	1	1806408
1056	12.8	0.7	0.0	chr19	4815489	4815637	(53801979)	C	AluJo	SINE/Alu	(77)	235	86	1806549
15	15.8	7.8	1.8	chr19	4909661	4909711	(53707905)	+	G-rich	Low_complexity	1	55	(0)	1806852
28017	7.6	1.3	1.3	chr19	5159634	5165376	(53452240)	C	HERV9-int	LTR/ERV1	(3458)	4978	29	1807255
39	10.8	1.7	0.0	chr19	5246885	5246944	(53370672)	+	(GA)n	Simple_repeat	1	61	(0)	1807483
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
229	25.1	4.3	3.1	chr19	5566143	5567061	(53050555)	+	(AGAGAC)n	Simple_repeat	1	929	(0)	1808364
364	36.9	7.3	4.3	chr19	5567073	5567471	(53050145)	+	HAL1	LINE/L1	880	1291	(1216)	1808365
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
1772	15.6	1.0	5.7	chr19	5817055	5817368	(52800248)	+	AluJo	SINE/Alu	1	299	(13)	1808921
89	24.8	1.8	3.8	chr19	5817370	5817653	(52799963)	+	GA-rich	Low_complexity	1	289	(0)	1808922
28	28.8	0.0	3.7	chr19	6424311	6424418	(52193198)	+	(GCCCCC)n	Simple_repeat	1	108	(0)	1810201
260	20.9	4.5	5.4	chr19	6530257	6530479	(52087137)	+	HERVIP10FH-int	LTR/ERV1	778	998	(4104)	1810497
50	18.0	6.4	2.4	chr19	6530484	6530640	(52086976)	+	(AGACAG)n	Simple_repeat	1	167	(0)	1810498
15	15.5	2.8	0.0	chr19	6586830	6586865	(52030751)	+	G-rich	Low_complexity	1	37	(0)	1810653
192	26.3	1.3	5.9	chr19	6586866	6586902	(52030714)	+	GA-rich	Low_complexity	72	109	(645)	1810652
19	8.1	0.0	0.0	chr19	6586903	6586928	(52030688)	+	(A)n	Simple_repeat	1	26	(0)	1810654
192	26.3	1.3	5.9	chr19	6586929	6587548	(52030068)	+	GA-rich	Low_complexity	110	754	(0)	1810652
2203	22.3	7.1	1.3	chr19	6587557	6587714	(52029902)	+	MER54A	LTR/ERVL	334	512	(389)	1810655
174	31.0	3.4	0.7	chr19	6589090	6589379	(52028237)	+	(CT)n	Simple_repeat	1	299	(0)	1810658
2090	13.9	0.7	0.0	chr19	6589380	6589689	(52027927)	C	AluSx1	SINE/Alu	(0)	312	1	1810659
174	31.0	3.4	0.7	chr19	6589690	6590075	(52027541)	+	(CT)n	Simple_repeat	2	396	(0)	1810660
5771	7.8	2.6	1.6	chr19	6597886	6598689	(52018927)	+	Harlequin-int	LTR/ERV1	263	1074	(5822)	1810679
328	19.7	1.1	0.6	chr19	6709963	6710622	(51906994)	+	GA-rich	Low_complexity	1	667	(0)	1810972
84	28.7	0.8	1.2	chr19	6877843	6877948	(51739668)	+	GA-rich	Low_complexity	150	254	(0)	1811441
940	23.5	2.7	7.0	chr19	6877955	6878238	(51739378)	+	MLT1D	LTR/ERVL-MaLR	222	474	(31)	1811437
923	24.9	0.0	0.0	chr19	7179548	7179744	(51437872)	+	MER58A	DNA/hAT-Charlie	3	199	(25)	1812199
661	16.8	0.0	1.8	chr19	7179809	7179984	(51437632)	+	MLT1H2	LTR/ERVL-MaLR	2	182	(307)	1812200
31	8.3	2.0	0.0	chr19	7197322	7197372	(51420244)	+	(GAGT)n	Simple_repeat	1	52	(0)	1812249
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
255	25.2	42.7	3.7	chr19	7295467	7295606	(51322010)	+	L2b	LINE/L2	3001	3208	(218)	1812543
716	11.3	0.0	0.0	chr19	7303308	7303404	(51314212)	+	AluJb	SINE/Alu	39	135	(177)	1812567
371	17.5	0.0	0.0	chr19	7303405	7303467	(51314149)	+	AluJb	SINE/Alu	240	302	(0)	1812567
41	28.2	5.6	0.6	chr19	7303468	7303643	(51313973)	+	GA-rich	Low_complexity	1	184	(0)	1812568
2276	9.5	0.0	0.0	chr19	7385492	7385775	(51231841)	C	AluSx1	SINE/Alu	(28)	284	1	1812810
1020	18.8	0.0	6.1	chr19	7385800	7385823	(51231793)	C	AluJr	SINE/Alu	(19)	293	271	1812811
142	10.9	0.5	0.0	chr19	7385824	7386046	(51231570)	+	(TC)n	Simple_repeat	1	224	(0)	1812812
1020	18.8	0.0	6.1	chr19	7386047	7386234	(51231382)	C	AluJr	SINE/Alu	(42)	270	94	1812811
87	28.6	3.2	2.2	chr19	7645781	7646128	(50971488)	+	(TC)n	Simple_repeat	1	359	(0)	1813395
30	0.0	0.0	0.0	chr19	7913044	7913069	(50704547)	+	(CT)n	Simple_repeat	1	26	(0)	1813964
56	19.9	1.6	0.0	chr19	8022588	8022652	(50594964)	+	(TCTT)n	Simple_repeat	1	66	(0)	1814190
50	31.8	1.5	1.9	chr19	8146571	8146684	(50470932)	+	GA-rich	Low_complexity	1	115	(0)	1814510
813	13.6	2.4	0.8	chr19	8146685	8146809	(50470807)	+	AluJr	SINE/Alu	1	127	(185)	1814511
50	31.8	1.5	1.9	chr19	8146814	8146902	(50470714)	+	GA-rich	Low_complexity	116	203	(0)	1814512
1748	16.3	2.4	1.7	chr19	8160056	8160343	(50457273)	+	AluJr	SINE/Alu	1	290	(22)	1814547
417	32.6	7.8	10.5	chr19	8160344	8160428	(50457188)	C	L1MC5	LINE/L1	(2251)	7053	6972	1814546
59	1.9	0.0	0.0	chr19	8160429	8160483	(50457133)	+	(TC)n	Simple_repeat	1	55	(0)	1814548
417	32.6	7.8	10.5	chr19	8160484	8160498	(50457118)	C	L1MC5	LINE/L1	(2333)	6971	6957	1814546
18	0.0	0.0	0.0	chr19	8160499	8160516	(50457100)	+	(TA)n	Simple_repeat	1	18	(0)	1814549
306	31.5	7.8	1.5	chr19	8413613	8413744	(50203872)	+	MIRb	SINE/MIR	115	255	(13)	1815249
1751	13.0	5.7	4.0	chr19	8440983	8441286	(50176330)	C	AluSx1	SINE/Alu	(0)	312	1	1815339
2156	15.1	0.0	0.0	chr19	8441442	8441752	(50175864)	C	AluSx1	SINE/Alu	(1)	311	1	1815340
2128	10.7	0.4	0.0	chr19	8553592	8553872	(50063744)	+	AluSx1	SINE/Alu	2	283	(29)	1815567
654	27.0	7.5	15.6	chr19	8553873	8553894	(50063722)	C	L2a	LINE/L2	(106)	3320	3320	1815566
47	4.0	0.0	1.9	chr19	8553895	8553948	(50063668)	+	(CT)n	Simple_repeat	1	54	(0)	1815568
654	27.0	7.5	15.6	chr19	8553949	8553973	(50063643)	C	L2a	LINE/L2	(106)	3320	3308	1815566
1818	14.8	1.4	1.4	chr19	8553974	8554256	(50063360)	C	AluJr	SINE/Alu	(29)	283	1	1815569
122	23.6	1.1	4.6	chr19	8561353	8561705	(50055911)	+	(CCTT)n	Simple_repeat	1	341	(0)	1815588
1249	23.6	5.8	7.9	chr19	8652402	8652787	(49964829)	+	MER97b	DNA/hAT-Tip100	583	956	(93)	1815837
68	22.2	1.0	5.0	chr19	8652788	8652909	(49964707)	+	(TTTC)n	Simple_repeat	1	117	(0)	1815839
34	5.0	2.4	0.0	chr19	8652910	8652951	(49964665)	+	(TC)n	Simple_repeat	1	43	(0)	1815840
68	22.2	1.0	5.0	chr19	8652952	8653028	(49964588)	+	(TTTC)n	Simple_repeat	2	76	(0)	1815841
53	0.0	0.0	0.0	chr19	8653039	8653083	(49964533)	+	(TC)n	Simple_repeat	1	45	(0)	1815842
2129	14.0	1.6	0.3	chr19	8653084	8653380	(49964236)	C	AluSq2	SINE/Alu	(11)	302	1	1815843
49	0.0	0.0	0.0	chr19	8694854	8694895	(49922721)	+	(AG)n	Simple_repeat	1	42	(0)	1815951
1933	14.7	0.0	0.7	chr19	8694953	8695238	(49922378)	+	AluJb	SINE/Alu	1	284	(28)	1815952
2045	10.8	0.0	0.0	chr19	9006932	9007217	(49610399)	+	AluSz	SINE/Alu	1	286	(26)	1816496
27	8.2	0.0	0.0	chr19	9007218	9007248	(49610368)	+	(CA)n	Simple_repeat	1	31	(0)	1816497
63	0.0	0.0	0.0	chr19	9007249	9007302	(49610314)	+	(AG)n	Simple_repeat	1	54	(0)	1816498
1375	18.5	2.3	11.2	chr19	10048235	10048563	(48569053)	+	AluJo	SINE/Alu	2	300	(12)	1818759
144	24.7	7.9	0.2	chr19	10048566	10048946	(48568670)	+	GA-rich	Low_complexity	1	419	(0)	1818760
13	11.1	3.2	3.1	chr19	10096519	10096549	(48521067)	+	(CAG)n	Simple_repeat	1	32	(0)	1818889
765	29.1	11.3	4.6	chr19	10099602	10099760	(48517856)	+	L2a	LINE/L2	2924	3126	(300)	1818898
62	5.9	0.0	0.0	chr19	10099807	10099877	(48517739)	+	(CT)n	Simple_repeat	1	71	(0)	1818900
13	8.5	4.0	0.0	chr19	10419324	10419348	(48198268)	+	(CGCT)n	Simple_repeat	1	26	(0)	1819691
23	30.7	0.0	3.1	chr19	10420446	10420542	(48197074)	+	G-rich	Low_complexity	1	97	(0)	1819693
1832	20.1	0.0	1.9	chr19	10428070	10428387	(48189229)	+	AluJo	SINE/Alu	1	312	(0)	1819713
22	10.1	0.0	0.0	chr19	10428388	10428419	(48189197)	+	(GA)n	Simple_repeat	1	32	(0)	1819714
20	10.4	0.0	0.0	chr19	10428472	10428503	(48189113)	+	(ATC)n	Simple_repeat	1	32	(0)	1819715
2110	6.8	4.5	0.4	chr19	11089873	11090150	(47527466)	C	AluSx1	SINE/Alu	(22)	290	1	1821402
14	19.8	0.0	4.5	chr19	11090388	11090431	(47527185)	+	(GCCCCC)n	Simple_repeat	1	44	(0)	1821403
14	16.7	2.9	0.0	chr19	11197889	11197922	(47419694)	+	G-rich	Low_complexity	1	35	(0)	1821708
418	19.9	0.0	0.0	chr19	11198073	11198160	(47419456)	+	MIR	SINE/MIR	105	191	(71)	1821709
236	26.9	0.0	0.0	chr19	11344712	11344763	(47272853)	+	MER91A	DNA/hAT-Tip100	1	52	(144)	1822104
304	22.9	0.0	0.0	chr19	11384508	11384568	(47233048)	+	MIRc	SINE/MIR	85	145	(123)	1822184
42	0.0	0.0	0.0	chr19	11384668	11384703	(47232913)	+	(TC)n	Simple_repeat	1	36	(0)	1822185
66	3.0	0.0	0.0	chr19	11384706	11384773	(47232843)	+	(TTCC)n	Simple_repeat	1	68	(0)	1822186
809	20.9	20.0	0.4	chr19	11384792	11385023	(47232593)	C	AluJb	SINE/Alu	(34)	278	1	1822187
2453	7.1	0.0	0.3	chr19	11395631	11395926	(47221690)	C	AluSc	SINE/Alu	(14)	295	1	1822222
1831	13.3	0.0	9.7	chr19	11395930	11396100	(47221516)	C	AluJo	SINE/Alu	(14)	298	136	1822223
43	0.0	0.0	0.0	chr19	11396101	11396137	(47221479)	+	(TC)n	Simple_repeat	1	37	(0)	1822224
1831	13.3	0.0	9.7	chr19	11396138	11396158	(47221458)	C	AluJo	SINE/Alu	(177)	135	136	1822223
2254	7.0	0.3	1.1	chr19	11396159	11396470	(47221146)	C	AluSz	SINE/Alu	(0)	312	1	1822225
38	2.8	0.0	0.0	chr19	11454450	11454486	(47163130)	+	(TC)n	Simple_repeat	1	37	(0)	1822370
2366	7.9	0.3	2.5	chr19	11463690	11464006	(47153610)	+	AluSg	SINE/Alu	1	310	(0)	1822394
62	6.7	0.0	0.0	chr19	11464075	11464152	(47153464)	+	(CTCT)n	Simple_repeat	1	78	(0)	1822395
1858	15.9	1.0	1.0	chr19	11464168	11464462	(47153154)	C	AluJb	SINE/Alu	(17)	295	1	1822396
494	32.7	10.2	0.3	chr19	11482871	11483152	(47134464)	+	L2a	LINE/L2	2967	3279	(147)	1822442
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
1373	17.6	4.3	5.0	chr19	11580632	11580913	(47036703)	+	AluJo	SINE/Alu	1	282	(30)	1822707
33	0.0	0.0	0.0	chr19	11580914	11580941	(47036675)	+	(AG)n	Simple_repeat	1	28	(0)	1822708
1373	17.6	4.3	5.0	chr19	11580942	11580959	(47036657)	+	AluJo	SINE/Alu	283	299	(13)	1822707
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
27	0.0	0.0	0.0	chr19	12401542	12401567	(46216049)	+	(T)n	Simple_repeat	1	26	(0)	1824374
36	0.0	0.0	0.0	chr19	12401570	12401600	(46216016)	+	(GA)n	Simple_repeat	1	31	(0)	1824375
2029	8.1	2.5	1.8	chr19	12401601	12401872	(46215744)	C	AluSg	SINE/Alu	(35)	275	2	1824376
35	16.1	1.2	3.6	chr19	12789151	12789174	(45828442)	+	(CAGAGA)n	Simple_repeat	1	81	(0)	1825215
40	9.5	0.0	0.0	chr19	12789175	12789230	(45828386)	+	(GA)n	Simple_repeat	1	56	(0)	1825216
13	3.1	15.2	0.0	chr19	12801855	12801887	(45815729)	+	(CGGAG)n	Simple_repeat	1	38	(0)	1825239
2498	7.1	0.3	0.0	chr19	12918672	12918980	(45698636)	+	AluSg	SINE/Alu	1	310	(0)	1825529
180	32.0	2.5	2.7	chr19	12982553	12982915	(45634701)	+	(TC)n	Simple_repeat	1	360	(0)	1825702
2066	11.9	0.3	0.3	chr19	12982916	12983201	(45634415)	C	AluSc	SINE/Alu	(0)	309	24	1825703
36	33.7	1.9	1.2	chr19	12998125	12998341	(45619275)	+	(TC)n	Simple_repeat	1	218	(0)	1825735
19	26.7	1.5	1.5	chr19	12998283	12998348	(45619268)	+	(CTCTTT)n	Simple_repeat	1	67	(0)	1825736
40	6.6	0.0	0.0	chr19	13023061	13023108	(45594508)	+	(TC)n	Simple_repeat	1	48	(0)	1825767
18	14.7	0.0	0.0	chr19	13023167	13023196	(45594420)	+	(GA)n	Simple_repeat	1	30	(0)	1825768
18	12.2	0.0	0.0	chr19	13023241	13023267	(45594349)	+	(CA)n	Simple_repeat	1	27	(0)	1825769
15	10.0	0.0	0.0	chr19	13096203	13096224	(45521392)	+	(CT)n	Simple_repeat	1	22	(0)	1825864
17	9.3	0.0	7.5	chr19	13096354	13096393	(45521223)	+	GA-rich	Low_complexity	1	40	(0)	1825865
760	12.6	4.0	0.0	chr19	13187405	13187523	(45430093)	+	L1MB5	LINE/L1	6040	6163	(11)	1826075
48	30.9	0.0	0.7	chr19	13187524	13187665	(45429951)	+	(CCCT)n	Simple_repeat	1	142	(0)	1826076
1203	13.4	4.4	0.0	chr19	13187666	13187837	(45429779)	C	AluSx1	SINE/Alu	(1)	311	132	1826077
40	8.8	1.6	1.6	chr19	13267116	13267177	(45350439)	+	(GA)n	Simple_repeat	1	63	(0)	1826294
73	4.1	0.0	0.0	chr19	13336565	13336640	(45280976)	+	(GA)n	Simple_repeat	1	76	(0)	1826476
779	30.1	5.9	3.2	chr19	13336649	13336895	(45280721)	C	MIR	SINE/MIR	(1)	261	8	1826477
48	32.7	1.0	1.5	chr19	13574213	13574411	(45043205)	+	GA-rich	Low_complexity	1	201	(0)	1827148
36	5.2	0.0	0.0	chr19	13574427	13574466	(45043150)	+	(TC)n	Simple_repeat	1	40	(0)	1827149
1855	10.3	0.7	10.0	chr19	13574467	13574776	(45042840)	C	AluSx1	SINE/Alu	(31)	281	1	1827150
85	21.4	1.9	7.0	chr19	13604703	13604820	(45012796)	+	GA-rich	Low_complexity	181	293	(0)	1827245
438	33.6	9.5	4.5	chr19	13604842	13605295	(45012321)	+	L1M4c	LINE/L1	947	1528	(1215)	1827246
212	14.3	2.5	1.7	chr19	13618869	13619167	(44998449)	+	GA-rich	Low_complexity	70	418	(0)	1827287
39	2.7	0.0	0.0	chr19	13619281	13619318	(44998298)	+	(TC)n	Simple_repeat	1	38	(0)	1827289
156	12.8	3.3	6.2	chr19	13633610	13634001	(44983615)	+	(CTTC)n	Simple_repeat	1	405	(0)	1827334
334	18.7	0.0	3.9	chr19	13794663	13794740	(44822876)	C	MADE2	DNA/TcMar-Mariner	(0)	80	6	1827822
194	19.6	1.8	9.7	chr19	13794921	13794982	(44822634)	C	MIRc	SINE/MIR	(146)	122	66	1827823
755	24.4	0.0	0.0	chr19	13823838	13824005	(44793611)	C	MLT1B	LTR/ERVL-MaLR	(8)	382	215	1827903
67	15.6	6.2	1.2	chr19	13824031	13824190	(44793426)	+	GA-rich	Low_complexity	1	170	(0)	1827904
251	24.7	0.0	1.3	chr19	13824200	13824277	(44793339)	C	MLT1B	LTR/ERVL-MaLR	(203)	171	95	1827903
899	6.4	0.0	20.5	chr19	13824280	13824450	(44793166)	+	AluSz	SINE/Alu	1	136	(176)	1827905
14	14.3	0.0	3.0	chr19	13850546	13850578	(44767038)	+	G-rich	Low_complexity	1	33	(0)	1827953
286	26.9	5.8	0.0	chr19	13850713	13850840	(44766776)	+	MIR	SINE/MIR	9	145	(63)	1827954
575	25.5	1.4	0.0	chr19	14037555	14037699	(44579917)	+	L2a	LINE/L2	2993	3139	(287)	1828413
609	13.2	3.5	7.4	chr19	14037702	14037822	(44579794)	+	AluJr	SINE/Alu	1	116	(196)	1828414
2492	7.9	0.0	0.3	chr19	14037825	14038129	(44579487)	C	AluSc5	SINE/Alu	(5)	304	1	1828415
226	37.1	2.8	0.0	chr19	14081002	14081106	(44536510)	+	MIR1_Amn	SINE/MIR	29	136	(94)	1828529
18	0.0	0.0	0.0	chr19	14090582	14090601	(44527015)	+	(A)n	Simple_repeat	1	20	(0)	1828549
32	17.2	1.7	0.0	chr19	14090601	14090660	(44526956)	+	GA-rich	Low_complexity	1	61	(0)	1828550
15	21.8	0.0	0.0	chr19	14090671	14090707	(44526909)	+	(CACA)n	Simple_repeat	1	37	(0)	1828551
12	10.7	6.4	6.0	chr19	14163423	14163456	(44454160)	+	GA-rich	Low_complexity	1	35	(0)	1828717
40	2.4	2.4	0.0	chr19	14163457	14163498	(44454118)	+	(GA)n	Simple_repeat	1	43	(0)	1828718
12	10.7	6.4	6.0	chr19	14163499	14163510	(44454106)	+	GA-rich	Low_complexity	36	46	(0)	1828719
42	7.1	1.7	0.0	chr19	14166546	14166604	(44451012)	+	(AG)n	Simple_repeat	1	60	(0)	1828723
41	4.7	0.0	0.0	chr19	14183194	14183237	(44434379)	+	(AG)n	Simple_repeat	1	44	(0)	1828767
62	14.5	0.0	0.0	chr19	14204663	14204768	(44412848)	+	(AGAG)n	Simple_repeat	1	106	(0)	1828818
36	25.6	2.7	3.9	chr19	14248619	14248767	(44368849)	+	(CCCT)n	Simple_repeat	1	153	(0)	1828949
390	31.2	17.2	4.2	chr19	14250579	14251095	(44366521)	+	L2b	LINE/L2	2648	3282	(105)	1828955
550	20.7	1.6	6.2	chr19	14269528	14269656	(44347960)	C	MIR	SINE/MIR	(117)	145	23	1829014
49	16.1	3.6	1.7	chr19	14269659	14269769	(44347847)	+	(CTTT)n	Simple_repeat	1	115	(0)	1829015
2318	11.0	1.0	0.0	chr19	14269770	14270078	(44347538)	C	AluSp	SINE/Alu	(0)	313	2	1829016
1823	14.4	10.5	0.9	chr19	14274662	14274832	(44342784)	C	THE1D	LTR/ERVL-MaLR	(0)	381	207	1829030
107	0.0	1.1	0.0	chr19	14274833	14274926	(44342690)	+	(GA)n	Simple_repeat	1	95	(0)	1829031
1823	14.4	10.5	0.9	chr19	14274927	14275098	(44342518)	C	THE1D	LTR/ERVL-MaLR	(175)	206	2	1829030
130	28.3	3.7	1.0	chr19	14384673	14384958	(44232658)	+	(TC)n	Simple_repeat	1	333	(15)	1829366
130	28.3	3.7	1.0	chr19	14385312	14385460	(44232156)	+	(TC)n	Simple_repeat	1	150	(0)	1829369
1286	13.9	2.8	13.6	chr19	14485686	14485702	(44131914)	C	AluJr	SINE/Alu	(196)	116	117	1829611
61	3.4	0.0	0.0	chr19	14485703	14485763	(44131853)	+	(AG)n	Simple_repeat	1	61	(0)	1829613
2424	8.4	0.0	0.0	chr19	14485770	14486068	(44131548)	C	AluY	SINE/Alu	(11)	300	2	1829614
35	38.8	0.0	2.2	chr19	14551850	14551972	(44065644)	+	(TTCT)n	Simple_repeat	3	162	(0)	1829789
1386	16.5	3.6	11.0	chr19	14551973	14552140	(44065476)	C	AluJo	SINE/Alu	(10)	302	132	1829790
68	1.3	2.4	3.5	chr19	14650601	14650683	(43966933)	+	(TC)n	Simple_repeat	1	85	(0)	1830051
44	23.5	1.8	0.9	chr19	14776180	14776291	(43841325)	+	GA-rich	Low_complexity	1	114	(0)	1830352
1017	16.3	0.0	0.0	chr19	15168924	15169076	(43448540)	C	AluJo	SINE/Alu	(22)	290	138	1831278
1305	19.7	1.0	7.6	chr19	15169078	15169186	(43448430)	+	MLT1B	LTR/ERVL-MaLR	82	188	(202)	1831279
51	0.0	0.0	0.0	chr19	15169187	15169230	(43448386)	+	(TC)n	Simple_repeat	1	44	(0)	1831280
1305	19.7	1.0	7.6	chr19	15169231	15169409	(43448207)	+	MLT1B	LTR/ERVL-MaLR	189	349	(41)	1831279
12	21.1	0.0	6.7	chr19	15178107	15178151	(43439465)	+	G-rich	Low_complexity	1	45	(0)	1831307
16	30.9	1.4	1.4	chr19	15380240	15380308	(43237308)	+	(GGC)n	Simple_repeat	1	70	(0)	1831698
17	14.2	0.0	0.0	chr19	15380373	15380403	(43237213)	+	(CCT)n	Simple_repeat	1	31	(0)	1831699
49	0.0	0.0	0.0	chr19	15406363	15406404	(43211212)	+	(GA)n	Simple_repeat	1	42	(0)	1831741
13	18.3	5.4	0.0	chr19	15432769	15432805	(43184811)	+	(GCC)n	Simple_repeat	1	39	(0)	1831784
2616	17.7	1.8	2.8	chr19	15504452	15504634	(43112982)	C	L1MB5	LINE/L1	(2169)	5826	5652	1831946
45	2.4	0.0	0.0	chr19	15504635	15504677	(43112939)	+	(TC)n	Simple_repeat	1	43	(0)	1831948
1571	18.7	1.0	2.9	chr19	15504680	15504989	(43112627)	C	AluJb	SINE/Alu	(7)	305	2	1831949
29	11.4	6.7	1.6	chr19	15563844	15563903	(43053713)	+	(CT)n	Simple_repeat	1	64	(0)	1832117
190	24.0	3.6	0.4	chr19	15813415	15813937	(42803679)	+	GA-rich	Low_complexity	1	542	(0)	1832562
91	19.9	2.9	1.0	chr19	15920860	15921128	(42696488)	+	(TC)n	Simple_repeat	1	273	(0)	1832787
937	27.9	6.5	11.8	chr19	15923137	15923238	(42694378)	+	LTR40A1	LTR/ERVL	155	259	(325)	1832789
50	2.2	0.0	0.0	chr19	15923239	15923285	(42694331)	+	(CT)n	Simple_repeat	1	47	(0)	1832791
937	27.9	6.5	11.8	chr19	15923286	15923638	(42693978)	+	LTR40A1	LTR/ERVL	260	584	(0)	1832789
1265	16.2	3.5	5.6	chr19	15971849	15972082	(42645534)	+	AluJb	SINE/Alu	83	311	(1)	1832873
187	9.4	3.6	0.9	chr19	15972083	15972391	(42645225)	+	(GAAA)n	Simple_repeat	1	320	(0)	1832874
43	0.0	0.0	0.0	chr19	15988704	15988740	(42628876)	+	(TC)n	Simple_repeat	1	37	(0)	1832906
2337	10.3	0.0	0.6	chr19	15988743	15989053	(42628563)	C	AluSg4	SINE/Alu	(0)	310	2	1832907
13	25.8	2.2	0.0	chr19	16076660	16076705	(42540911)	+	(AGCGCG)n	Simple_repeat	1	47	(0)	1833071
12	12.6	3.7	0.0	chr19	16099787	16099813	(42517803)	+	(TCTT)n	Simple_repeat	1	28	(0)	1833118
182	27.0	2.2	0.7	chr19	16286771	16287317	(42330299)	+	(CT)n	Simple_repeat	1	559	(0)	1833605
2142	10.2	0.7	0.3	chr19	16329538	16329860	(42287756)	C	AluSx	SINE/Alu	(0)	312	5	1833729
18	0.0	0.0	0.0	chr19	16329864	16329883	(42287733)	+	(CT)n	Simple_repeat	1	20	(0)	1833730
2273	12.4	0.0	0.3	chr19	17181734	17182068	(41435548)	C	AluSq2	SINE/Alu	(0)	313	9	1835692
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
246	24.4	19.5	1.0	chr19	17305318	17305428	(41312188)	C	MIR3	SINE/MIR	(102)	166	31	1835989
15	36.9	0.0	2.3	chr19	17555736	17555748	(41061868)	+	(GCC)n	Simple_repeat	1	26	(60)	1836688
15	28.4	0.0	0.0	chr19	17555749	17555795	(41061821)	+	(GCT)n	Simple_repeat	1	47	(0)	1836689
15	36.9	0.0	2.3	chr19	17555796	17555821	(41061795)	+	(GCC)n	Simple_repeat	27	86	(0)	1836688
33	24.2	4.3	2.5	chr19	17679683	17679799	(40937817)	+	(TC)n	Simple_repeat	1	122	(0)	1836990
2151	19.2	1.4	9.5	chr19	17791600	17791958	(40825658)	C	L1MB5	LINE/L1	(9)	6165	5820	1837283
2168	9.8	0.0	7.4	chr19	17807208	17807543	(40810073)	+	AluSz	SINE/Alu	1	311	(1)	1837325
208	30.7	7.8	7.3	chr19	17807578	17807756	(40809860)	C	L2b	LINE/L2	(791)	2628	2449	1837311
2105	13.6	0.0	1.6	chr19	17892355	17892652	(40724964)	+	AluSx	SINE/Alu	2	296	(16)	1837549
54	0.0	0.0	0.0	chr19	17892653	17892698	(40724918)	+	(AG)n	Simple_repeat	1	46	(0)	1837550
2105	13.6	0.0	1.6	chr19	17892699	17892715	(40724901)	+	AluSx	SINE/Alu	297	312	(0)	1837549
231	28.9	11.7	2.3	chr19	17892732	17892862	(40724754)	C	L2a	LINE/L2	(150)	3237	3093	1837541
2119	13.2	1.3	0.0	chr19	18000316	18000619	(40616997)	+	AluSx	SINE/Alu	1	308	(4)	1837826
33	26.4	2.3	3.7	chr19	18000620	18000706	(40616910)	+	GA-rich	Low_complexity	43	130	(0)	1837827
15	19.5	0.0	7.4	chr19	18109891	18109944	(40507672)	+	G-rich	Low_complexity	1	54	(0)	1838132
18	17.7	0.0	0.0	chr19	18110202	18110239	(40507377)	+	(CGTC)n	Simple_repeat	1	38	(0)	1838133
19	15.9	2.2	2.2	chr19	18161433	18161477	(40456139)	+	(GCC)n	Simple_repeat	1	46	(0)	1838245
225	37.7	0.9	3.6	chr19	18222500	18222609	(40395007)	+	MIR	SINE/MIR	28	134	(128)	1838401
21	18.4	0.0	0.0	chr19	18222611	18222648	(40394968)	+	(T)n	Simple_repeat	1	38	(0)	1838402
35	0.0	0.0	0.0	chr19	18222658	18222687	(40394929)	+	(TC)n	Simple_repeat	1	30	(0)	1838403
2149	13.3	0.7	0.0	chr19	18222692	18222999	(40394617)	C	AluJr	SINE/Alu	(2)	310	1	1838404
859	12.2	0.0	0.0	chr19	18252485	18252599	(40365017)	+	AluJo	SINE/Alu	3	117	(195)	1838474
2145	13.6	3.5	0.0	chr19	18252606	18252906	(40364710)	C	AluSx	SINE/Alu	(0)	312	1	1838475
12	23.3	0.0	0.0	chr19	18292355	18292389	(40325227)	+	G-rich	Low_complexity	1	35	(0)	1838555
464	23.6	8.0	3.8	chr19	18323532	18323663	(40293953)	+	MIR	SINE/MIR	109	246	(16)	1838617
2596	7.1	0.3	0.0	chr19	18346628	18346938	(40270678)	C	AluSp	SINE/Alu	(0)	313	2	1838678
137	30.0	2.5	0.9	chr19	18346939	18347044	(40270572)	+	(TC)n	Simple_repeat	2	109	(0)	1838679
1614	15.6	0.0	14.2	chr19	18347045	18347403	(40270213)	C	AluJb	SINE/Alu	(0)	312	5	1838680
217	26.3	4.8	9.2	chr19	18417406	18417514	(40200102)	+	MIRc	SINE/MIR	23	126	(142)	1838867
16	25.0	0.0	5.7	chr19	18417959	18418011	(40199605)	+	(CA)n	Simple_repeat	1	53	(0)	1838868
17	20.0	0.0	0.0	chr19	18429057	18429096	(40188520)	+	(GGCGCAG)n	Simple_repeat	1	40	(0)	1838879
230	24.4	0.0	0.0	chr19	18429973	18430017	(40187599)	+	MIRc	SINE/MIR	84	128	(140)	1838881
21	17.2	2.0	2.0	chr19	18559864	18559886	(40057730)	+	(CCTT)n	Simple_repeat	1	24	(0)	1839126
54	9.3	3.2	0.0	chr19	18559887	18559979	(40057637)	+	(TC)n	Simple_repeat	1	96	(0)	1839127
21	17.2	2.0	2.0	chr19	18559980	18560005	(40057611)	+	(CCTT)n	Simple_repeat	1	26	(0)	1839128
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
3890	14.5	5.5	6.7	chr19	18966345	18966703	(39650913)	+	LTR9A1	LTR/ERV1	338	726	(2)	1839945
697	19.9	0.0	4.7	chr19	18966704	18966795	(39650821)	+	AluJb	SINE/Alu	53	141	(171)	1839944
21	26.4	2.8	0.0	chr19	19618578	19618649	(38998967)	+	G-rich	Low_complexity	1	74	(0)	1841312
46552	19.6	1.7	0.3	chr19	21688714	21697447	(36920169)	C	HERVS71-int	LTR/ERV1	(69)	8909	4	1844404
69	0.0	0.0	0.0	chr19	23652269	23652327	(34965289)	+	(AG)n	Simple_repeat	1	59	(0)	1846986
2140	12.2	0.0	0.0	chr19	23652329	23652606	(34965010)	C	AluSq2	SINE/Alu	(35)	278	1	1846987
728	19.6	0.8	0.9	chr19	27766962	27771620	(30845996)	+	HSAT4	Satellite/centr	1	4657	(0)	1847880
278	30.8	0.0	5.5	chr19	27771722	27771812	(30845804)	C	AluJb	SINE/Alu	(67)	245	160	1847881
15	5.5	0.0	0.0	chr19	27771831	27771849	(30845767)	+	(TC)n	Simple_repeat	1	19	(0)	1847882
843	26.2	2.9	15.2	chr19	27836109	27836306	(30781310)	C	Ricksha_c	DNA/MULE-MuDR	(1347)	701	535	1847982
2112	12.8	0.0	1.0	chr19	27836307	27836611	(30781005)	C	AluSq	SINE/Alu	(11)	302	1	1847983
158	25.5	1.9	4.3	chr19	28142245	28142767	(30474849)	+	GA-rich	Low_complexity	1	533	(0)	1848333
775	20.4	5.9	15.6	chr19	28228911	28229154	(30388462)	C	MLT2B3	LTR/ERVL	(199)	355	137	1848449
560	27.6	4.5	6.1	chr19	28319207	28319434	(30298182)	C	L2a	LINE/L2	(0)	3426	3203	1848580
3823	20.4	1.8	4.1	chr19	28319439	28319821	(30297795)	C	LTR39	LTR/ERV1	(0)	783	413	1848581
300	27.7	15.4	2.1	chr19	28406740	28406879	(30210737)	C	L1MEd	LINE/L1	(5899)	1187	1026	1848720
1612	18.5	0.4	3.1	chr19	28422854	28423139	(30194477)	+	AluJr	SINE/Alu	2	279	(33)	1848743
39	19.8	1.9	3.7	chr19	28423141	28423247	(30194369)	+	A-rich	Low_complexity	1	109	(0)	1848744
216	28.8	14.8	8.0	chr19	28601744	28602122	(30015494)	+	L2c	LINE/L2	2924	3366	(60)	1849040
496	29.3	10.6	11.4	chr19	28602537	28603019	(30014597)	+	L1MEh	LINE/L1	385	819	(1416)	1849041
12	9.9	5.6	5.3	chr19	28727729	28727764	(29889852)	+	(GCCCC)n	Simple_repeat	1	38	(0)	1849165
1370	32.6	10.7	2.6	chr19	28979778	28980753	(29636863)	+	L2a	LINE/L2	2333	3420	(6)	1849540
191	27.6	0.6	0.0	chr19	29364952	29365462	(29252154)	+	(TCTCTC)n	Simple_repeat	1	514	(0)	1850123
88	1.3	0.0	0.0	chr19	29447484	29447562	(29170054)	+	(CT)n	Simple_repeat	1	79	(0)	1850258
46	0.0	0.0	0.0	chr19	29496821	29496859	(29120757)	+	(AC)n	Simple_repeat	1	39	(0)	1850326
273	18.4	18.0	0.9	chr19	29496860	29496969	(29120647)	+	MLT1K	LTR/ERVL-MaLR	404	538	(57)	1850325
12	14.1	3.0	2.9	chr19	29526161	29526193	(29091423)	+	(AGCAGA)n	Simple_repeat	1	34	(0)	1850367
15	12.9	2.8	2.7	chr19	29526235	29526270	(29091346)	+	(CCCGG)n	Simple_repeat	1	37	(0)	1850368
234	28.8	0.0	2.7	chr19	29578372	29578446	(29039170)	C	MLT1O	LTR/ERVL-MaLR	(201)	341	269	1850430
53	21.0	0.9	0.0	chr19	29578498	29578611	(29039005)	+	(CTCT)n	Simple_repeat	1	115	(0)	1850432
18	0.0	0.0	0.0	chr19	29578620	29578639	(29038977)	+	(AG)n	Simple_repeat	1	20	(0)	1850433
307	23.4	2.5	0.0	chr19	29578640	29578716	(29038900)	C	MLT1O	LTR/ERVL-MaLR	(341)	201	123	1850430
343	29.5	3.7	0.0	chr19	29596275	29596379	(29021237)	C	MamTip2	DNA/hAT-Tip100	(89)	216	108	1850460
17	4.0	0.0	3.6	chr19	29694704	29694731	(28922885)	+	(GGCCT)n	Simple_repeat	1	28	(0)	1850651
948	18.4	4.2	0.0	chr19	29780756	29780913	(28836703)	+	AluJo	SINE/Alu	137	301	(11)	1850831
270	36.4	9.0	3.6	chr19	29780914	29781010	(28836606)	+	L2a	LINE/L2	3320	3425	(1)	1850829
16	6.8	6.5	0.0	chr19	29781015	29781045	(28836571)	+	(GAAT)n	Simple_repeat	1	33	(0)	1850832
29	0.0	0.0	0.0	chr19	29796058	29796082	(28821534)	+	(AG)n	Simple_repeat	1	25	(0)	1850861
14	20.0	2.4	2.3	chr19	29811263	29811304	(28806312)	+	(TGAA)n	Simple_repeat	1	43	(0)	1850905
14	14.1	4.7	4.4	chr19	29812487	29812529	(28805087)	+	(CCG)n	Simple_repeat	1	45	(0)	1850909
26	15.1	0.0	1.9	chr19	29844484	29844536	(28773080)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1850975
12	17.4	0.0	8.7	chr19	29873737	29873782	(28743834)	+	(CCCCCG)n	Simple_repeat	1	46	(0)	1851044
792	15.6	0.0	0.0	chr19	29904768	29904876	(28712740)	+	AluJo	SINE/Alu	1	109	(203)	1851106
54	11.1	1.0	1.0	chr19	29904882	29904980	(28712636)	+	(TC)n	Simple_repeat	1	100	(0)	1851107
1834	15.7	0.7	3.8	chr19	29941329	29941647	(28675969)	+	AluJr	SINE/Alu	1	309	(3)	1851206
14	17.6	0.0	4.8	chr19	29942570	29942632	(28674984)	+	(CGCCCCC)n	Simple_repeat	1	60	(0)	1851207
607	23.0	5.0	3.0	chr19	29945089	29945285	(28672331)	C	MER105	DNA/hAT-Charlie	(2)	201	1	1851212
5990	22.8	13.5	3.2	chr19	30028581	30030640	(28586976)	C	L1MB7	LINE/L1	(288)	2368	66	1851305
22	21.1	2.0	0.0	chr19	30224944	30224992	(28392624)	+	(TC)n	Simple_repeat	1	50	(0)	1851573
12	23.0	0.0	4.5	chr19	30228711	30228754	(28388862)	+	(GAGCCGC)n	Simple_repeat	1	44	(0)	1851581
41	7.4	1.8	0.0	chr19	30283707	30283763	(28333853)	+	(AG)n	Simple_repeat	1	58	(0)	1851655
87	13.2	0.0	0.0	chr19	30286486	30286625	(28330991)	+	(GAGA)n	Simple_repeat	1	140	(0)	1851658
37	25.1	6.0	1.9	chr19	30365233	30365381	(28252235)	+	(CT)n	Simple_repeat	1	158	(0)	1851751
20	14.0	0.0	0.0	chr19	30397837	30397868	(28219748)	+	(GA)n	Simple_repeat	1	32	(0)	1851802
774	32.5	4.0	1.4	chr19	30486868	30487373	(28130243)	+	L1ME4c	LINE/L1	72	591	(239)	1851941
21	25.8	0.0	0.0	chr19	30487511	30487567	(28130049)	+	(TCTCTC)n	Simple_repeat	1	57	(0)	1851942
78	3.9	0.0	0.0	chr19	30664205	30664284	(27953332)	+	(TC)n	Simple_repeat	1	80	(0)	1852161
35	11.5	0.0	3.3	chr19	31070594	31070653	(27546963)	+	(GA)n	Simple_repeat	1	60	(0)	1852693
426	27.6	8.8	0.0	chr19	31110912	31111067	(27506549)	+	MER96	DNA/hAT-Tip100	1	171	(4)	1852747
47	4.2	0.0	0.0	chr19	31111088	31111136	(27506480)	+	(TC)n	Simple_repeat	1	49	(0)	1852748
1797	13.2	0.3	4.9	chr19	31111137	31111440	(27506176)	C	AluJr	SINE/Alu	(22)	290	1	1852749
2137	17.0	1.2	0.0	chr19	31182829	31183170	(27434446)	+	MLT2D	LTR/ERVL	1	346	(68)	1852868
70	1.6	0.0	0.0	chr19	31183179	31183242	(27434374)	+	(TC)n	Simple_repeat	1	64	(0)	1852869
23	24.9	1.7	0.0	chr19	31316751	31316808	(27300808)	+	GA-rich	Low_complexity	1	59	(0)	1853038
15	17.9	0.0	4.8	chr19	31349277	31349318	(27268298)	+	G-rich	Low_complexity	1	42	(0)	1853080
14	25.8	2.1	0.0	chr19	31350775	31350821	(27266795)	+	(CGGAGC)n	Simple_repeat	1	48	(0)	1853084
351	32.8	21.1	2.9	chr19	31551829	31552121	(27065495)	+	L2b	LINE/L2	1878	2213	(1206)	1853401
43	2.3	2.2	0.0	chr19	31552122	31552166	(27065450)	+	(TC)n	Simple_repeat	1	46	(0)	1853406
351	32.8	21.1	2.9	chr19	31552167	31552614	(27065002)	+	L2b	LINE/L2	2214	2812	(607)	1853401
192	20.2	6.6	0.7	chr19	31611304	31611845	(27005771)	+	GA-rich	Low_complexity	1	578	(0)	1853502
30	13.9	3.9	3.8	chr19	32075234	32075290	(26542326)	+	(CTTT)n	Simple_repeat	1	58	(0)	1854156
37	8.5	0.0	0.0	chr19	32075291	32075340	(26542276)	+	(TC)n	Simple_repeat	1	50	(0)	1854157
30	13.9	3.9	3.8	chr19	32075341	32075359	(26542257)	+	(CTTT)n	Simple_repeat	3	21	(0)	1854158
1853	17.9	0.7	0.0	chr19	32075399	32075689	(26541927)	+	AluJb	SINE/Alu	6	298	(14)	1854159
1513	28.5	5.3	1.2	chr19	32190144	32190543	(26427073)	+	LTR16D	LTR/ERVL	144	566	(85)	1854375
52	2.1	0.0	0.0	chr19	32190544	32190592	(26427024)	+	(TC)n	Simple_repeat	1	49	(0)	1854376
1513	28.5	5.3	1.2	chr19	32190593	32190678	(26426938)	+	LTR16D	LTR/ERVL	567	651	(0)	1854375
15	24.4	1.6	4.7	chr19	32224799	32224861	(26392755)	+	(CCGC)n	Simple_repeat	1	64	(0)	1854429
65	0.0	0.0	0.0	chr19	32285796	32285850	(26331766)	+	(TC)n	Simple_repeat	1	55	(0)	1854530
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
952	10.0	17.0	0.5	chr19	32387546	32387746	(26229870)	+	Charlie5	DNA/hAT-Charlie	2384	2624	(0)	1854699
929	25.1	3.2	0.9	chr19	32387756	32387968	(26229648)	+	MER58A	DNA/hAT-Charlie	2	219	(5)	1854700
13	21.4	3.9	3.7	chr19	32405916	32405967	(26211649)	+	(GGCG)n	Simple_repeat	1	54	(0)	1854737
806	27.3	9.2	2.1	chr19	32576569	32576950	(26040666)	+	HAL1ME	LINE/L1	1096	1507	(958)	1855078
19	23.4	7.4	1.1	chr19	32576951	32577031	(26040585)	+	(TTTCTC)n	Simple_repeat	1	87	(0)	1855079
50	5.6	0.0	0.0	chr19	32577043	32577098	(26040518)	+	(CT)n	Simple_repeat	1	56	(0)	1855080
1229	14.4	2.8	4.7	chr19	32577127	32577341	(26040275)	C	AluJr	SINE/Alu	(101)	211	1	1855081
245	33.8	0.0	0.0	chr19	32651791	32651861	(25965755)	+	L2b	LINE/L2	3301	3371	(4)	1855226
12	13.4	4.2	8.0	chr19	32692415	32692462	(25925154)	+	(CCTGG)n	Simple_repeat	1	50	(0)	1855321
5553	7.3	9.4	0.1	chr19	32693106	32693854	(25923762)	C	LTR12	LTR/ERV1	(0)	826	1	1855322
3247	11.5	2.6	2.2	chr19	32702013	32702502	(25915114)	C	LTR22B	LTR/ERVK	(0)	492	1	1855331
22	28.2	1.4	1.4	chr19	32746890	32746959	(25870657)	+	GA-rich	Low_complexity	1	71	(0)	1855423
3154	15.8	6.0	3.2	chr19	32891380	32892092	(25725524)	+	L1M2	LINE/L1	1965	2698	(4511)	1855670
2125	11.1	0.0	1.7	chr19	32909979	32910266	(25707350)	+	AluSz6	SINE/Alu	1	283	(29)	1855704
47	9.5	0.0	1.4	chr19	32910267	32910329	(25707287)	+	(GA)n	Simple_repeat	1	63	(0)	1855705
5552	12.8	4.8	0.6	chr19	32910330	32911237	(25706379)	C	Tigger3b	DNA/TcMar-Tigger	(283)	948	1	1855706
1984	20.5	7.2	10.7	chr19	33032317	33032609	(25585007)	C	MER21C	LTR/ERVL	(530)	408	9	1855995
236	20.8	1.9	0.0	chr19	33032616	33032668	(25584948)	C	MER112	DNA/hAT-Charlie	(203)	58	5	1855993
493	31.1	7.7	3.5	chr19	33032759	33033071	(25584545)	+	L4_A_Mam	LINE/RTE-X	4662	4988	(2)	1856001
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
1573	17.9	1.4	3.4	chr19	33363175	33363465	(25254151)	+	AluJb	SINE/Alu	2	286	(26)	1856677
51	0.0	0.0	0.0	chr19	33363467	33363510	(25254106)	+	(CA)n	Simple_repeat	1	44	(0)	1856678
18	4.8	0.0	0.0	chr19	33363511	33363532	(25254084)	+	(GA)n	Simple_repeat	1	22	(0)	1856679
19	26.0	1.4	4.0	chr19	33373697	33373770	(25243846)	+	(GGC)n	Simple_repeat	1	75	(0)	1856707
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
222	31.6	11.4	4.1	chr19	33778034	33778155	(24839461)	C	MIR	SINE/MIR	(117)	145	14	1857292
2268	10.7	0.7	0.0	chr19	34123837	34124135	(24493481)	+	AluSp	SINE/Alu	5	305	(8)	1857948
1245	28.3	16.2	1.6	chr19	34124148	34124703	(24492913)	C	L2	LINE/L2	(1362)	2057	1405	1857944
205	34.9	4.5	0.0	chr19	34134880	34134985	(24482631)	C	MIRb	SINE/MIR	(118)	150	40	1857972
783	24.1	11.6	1.4	chr19	34170763	34171048	(24446568)	C	L2a	LINE/L2	(1)	3425	3107	1858075
1141	27.8	9.2	4.0	chr19	34171034	34171191	(24446425)	C	L2a	LINE/L2	(434)	2985	2813	1858075
2622	6.4	0.3	0.3	chr19	34171192	34171489	(24446127)	C	AluSx3	SINE/Alu	(13)	298	1	1858076
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
391	16.7	3.7	3.7	chr19	34177524	34177604	(24440012)	+	MER94	DNA/hAT-Blackjack	1	81	(53)	1858083
1617	18.4	4.9	3.2	chr19	34177605	34177887	(24439729)	+	AluJo	SINE/Alu	1	288	(24)	1858084
2255	12.4	0.0	0.0	chr19	34177899	34178181	(24439435)	+	AluSx	SINE/Alu	21	303	(9)	1858086
13	9.1	0.0	0.0	chr19	34178182	34178194	(24439422)	+	(TAA)n	Simple_repeat	3	15	(0)	1858087
2507	10.7	0.0	0.3	chr19	34217994	34218303	(24399313)	C	AluSx3	SINE/Alu	(2)	309	1	1858175
215	31.0	15.9	2.8	chr19	34254089	34254267	(24363349)	+	L2a	LINE/L2	3198	3404	(22)	1858248
193	13.3	0.0	0.0	chr19	34359833	34359862	(24257754)	+	MIR1_Amn	SINE/MIR	122	151	(79)	1858484
418	12.3	1.3	6.2	chr19	34364894	34364974	(24252642)	C	AluJo	SINE/Alu	(60)	252	176	1858496
21	9.2	1.8	8.8	chr19	34365094	34365158	(24252458)	+	G-rich	Low_complexity	1	60	(0)	1858497
392	29.8	2.6	0.0	chr19	34367339	34367452	(24250164)	C	MIR	SINE/MIR	(108)	154	38	1858498
14	31.3	1.1	5.2	chr19	34482451	34482545	(24135071)	+	(CCTGCCC)n	Simple_repeat	1	96	(0)	1858734
6685	18.0	7.7	3.4	chr19	34559520	34560828	(24056788)	C	HERVS71-int	LTR/ERV1	(7605)	1373	4	1858839
6287	12.8	1.2	1.2	chr19	34920178	34921118	(23696498)	+	LTR5_Hs	LTR/ERVK	1	941	(27)	1859334
37	28.6	2.4	0.8	chr19	35031335	35031458	(23586158)	+	GA-rich	Low_complexity	1	127	(0)	1859553
432	26.4	6.5	6.5	chr19	35064181	35064318	(23553298)	+	MER91B	DNA/hAT-Tip100	4	141	(49)	1859635
35	2.7	2.6	0.0	chr19	35064319	35064356	(23553260)	+	(TC)n	Simple_repeat	1	39	(0)	1859636
1159	10.2	0.0	0.0	chr19	35064357	35064503	(23553113)	C	AluSx1	SINE/Alu	(20)	292	146	1859637
115	25.7	3.8	1.9	chr19	35562774	35563184	(23054432)	+	(TCTC)n	Simple_repeat	1	418	(0)	1860656
12	22.4	0.0	2.6	chr19	35629408	35629445	(22988171)	+	G-rich	Low_complexity	1	38	(0)	1860802
806	16.8	0.0	0.0	chr19	35655637	35655755	(22961861)	C	FLAM_A	SINE/Alu	(21)	121	3	1860862
54	11.1	1.0	1.0	chr19	35655756	35655854	(22961762)	+	(TC)n	Simple_repeat	1	100	(0)	1860863
1554	15.7	12.3	1.5	chr19	35655855	35656128	(22961488)	C	AluJo	SINE/Alu	(3)	309	2	1860864
1694	10.7	1.3	0.5	chr19	35770597	35770820	(22846796)	+	AluSx1	SINE/Alu	2	227	(85)	1861110
18	4.5	0.0	0.0	chr19	35770842	35770864	(22846752)	+	(TC)n	Simple_repeat	1	23	(0)	1861111
1303	17.7	9.0	3.9	chr19	35770918	35771027	(22846589)	+	L1ME2z	LINE/L1	6066	6199	(245)	1861112
1697	12.6	0.7	7.1	chr19	35771028	35771336	(22846280)	+	AluJr	SINE/Alu	19	307	(5)	1861113
12	28.7	0.0	0.0	chr19	35775679	35775720	(22841896)	+	(CGTC)n	Simple_repeat	1	42	(0)	1861124
18	11.0	2.3	4.5	chr19	35775723	35775765	(22841851)	+	(GCCCC)n	Simple_repeat	1	44	(0)	1861125
801	15.4	0.0	0.0	chr19	35852112	35852228	(22765388)	C	AluJr	SINE/Alu	(195)	117	1	1861309
35	4.5	4.3	0.0	chr19	35852281	35852326	(22765290)	+	(TC)n	Simple_repeat	1	48	(0)	1861310
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
757	33.1	10.8	4.5	chr19	36070670	36070925	(22546691)	C	Kanga11a	DNA/TcMar-Tc2	(439)	531	244	1861806
639	21.9	9.1	1.2	chr19	36169400	36169561	(22448055)	C	LTR68	LTR/ERV1	(154)	586	411	1862016
354	13.6	3.0	1.5	chr19	36169577	36169642	(22447974)	+	AluJo	SINE/Alu	236	302	(10)	1862017
9081	11.5	1.8	1.9	chr19	36256541	36258104	(22359512)	+	SST1	Satellite/centr	1	1563	(0)	1862240
28	13.7	2.1	0.0	chr19	36258105	36258152	(22359464)	+	(GT)n	Simple_repeat	1	49	(0)	1862241
25	23.6	1.5	1.5	chr19	36258163	36258228	(22359388)	+	(TC)n	Simple_repeat	1	67	(0)	1862242
1516	20.3	3.5	2.3	chr19	36440134	36440439	(22177177)	+	AluJb	SINE/Alu	2	311	(1)	1862549
104	5.2	0.0	2.7	chr19	36440440	36440587	(22177029)	+	(GAAA)n	Simple_repeat	1	148	(0)	1862550
2453	6.8	0.0	0.0	chr19	36797031	36797325	(21820291)	C	AluY	SINE/Alu	(16)	295	1	1863279
41	21.6	7.5	2.1	chr19	37270916	37270926	(21346690)	+	(ACAGAG)n	Simple_repeat	1	28	(156)	1864149
63	14.2	0.9	0.9	chr19	37270927	37271036	(21346580)	+	GA-rich	Low_complexity	1	111	(0)	1864150
41	21.6	7.5	2.1	chr19	37271037	37271090	(21346526)	+	(ACAGAG)n	Simple_repeat	29	184	(0)	1864149
33	24.0	2.2	1.1	chr19	37271043	37271132	(21346484)	+	(CA)n	Simple_repeat	1	92	(0)	1864151
12730	1.8	0.0	2.1	chr19	37271133	37272729	(21344887)	C	SST1	Satellite/centr	(0)	1563	1	1864152
32	25.9	4.5	3.7	chr19	37293674	37293684	(21323932)	+	(ACAG)n	Simple_repeat	1	25	(139)	1864182
49	16.0	1.1	1.1	chr19	37293685	37293776	(21323840)	+	GA-rich	Low_complexity	1	93	(0)	1864183
32	25.9	4.5	3.7	chr19	37293777	37293830	(21323786)	+	(ACAG)n	Simple_repeat	26	164	(0)	1864182
37	21.9	2.2	1.1	chr19	37293783	37293874	(21323742)	+	(CA)n	Simple_repeat	1	94	(0)	1864184
1841	12.1	8.7	6.5	chr19	37482633	37482815	(21134801)	+	THE1D	LTR/ERVL-MaLR	1	195	(186)	1864506
46	4.3	0.0	0.0	chr19	37482816	37482863	(21134753)	+	(TC)n	Simple_repeat	1	48	(0)	1864507
1841	12.1	8.7	6.5	chr19	37482864	37483051	(21134565)	+	THE1D	LTR/ERVL-MaLR	196	381	(0)	1864506
266	23.0	1.3	0.0	chr19	37705707	37705780	(20911836)	+	L1MEf	LINE/L1	3384	3458	(2688)	1864928
24	20.6	3.3	1.6	chr19	37705800	37705859	(20911757)	+	(TC)n	Simple_repeat	1	62	(0)	1864934
1952	14.0	2.5	0.0	chr19	37705920	37706197	(20911419)	+	AluSx	SINE/Alu	2	286	(26)	1864935
435	19.6	10.1	15.6	chr19	37881176	37881226	(20736390)	+	L1MC5a	LINE/L1	2388	2433	(344)	1865288
794	20.1	0.0	0.0	chr19	37881227	37881360	(20736256)	+	FLAM_A	SINE/Alu	1	134	(8)	1865294
312	32.2	10.0	3.8	chr19	37907541	37907884	(20709732)	+	MIRb	SINE/MIR	1	266	(2)	1865342
2473	8.2	0.3	0.0	chr19	37997587	37997892	(20619724)	+	AluSc	SINE/Alu	1	307	(2)	1865582
477	25.3	0.5	0.0	chr19	37997986	37998110	(20619506)	+	MIR	SINE/MIR	38	165	(103)	1865583
257	22.6	1.6	6.1	chr19	37998103	37998168	(20619448)	+	L2a	LINE/L2	3364	3426	(0)	1865584
2079	14.0	0.0	0.3	chr19	38230348	38230640	(20386976)	+	AluJb	SINE/Alu	21	312	(0)	1866163
15	16.8	2.8	0.0	chr19	38230641	38230674	(20386942)	+	GA-rich	Low_complexity	1	34	(0)	1866164
1466	19.2	7.5	0.0	chr19	38230679	38230938	(20386678)	+	AluJo	SINE/Alu	14	294	(18)	1866165
2181	13.6	0.0	0.0	chr19	38353053	38353353	(20264263)	+	AluSx1	SINE/Alu	2	302	(10)	1866486
2444	7.6	0.0	2.9	chr19	38353407	38353720	(20263896)	+	AluSx3	SINE/Alu	1	305	(6)	1866487
14	10.2	0.0	8.1	chr19	38434673	38434709	(20182907)	+	G-rich	Low_complexity	1	37	(0)	1866653
1801	17.3	1.3	3.5	chr19	38522320	38522637	(20094979)	+	AluJb	SINE/Alu	1	311	(1)	1866852
1481	8.3	0.0	1.0	chr19	38522669	38522861	(20094755)	+	AluSg7	SINE/Alu	2	192	(117)	1866853
21	10.8	0.0	0.0	chr19	38728067	38728097	(19889519)	+	(CT)n	Simple_repeat	1	31	(0)	1867310
61	0.0	0.0	0.0	chr19	38736009	38736063	(19881553)	+	(GGTCTCGGG)n	Simple_repeat	1	55	(0)	1867322
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
2506	14.7	0.5	0.7	chr19	38862477	38862887	(19754729)	C	LTR35A	LTR/ERV1	(0)	547	138	1867607
2369	10.4	0.3	0.0	chr19	38895791	38896097	(19721519)	+	AluSc8	SINE/Alu	1	308	(3)	1867696
25	11.4	0.0	0.0	chr19	38896100	38896137	(19721479)	+	(GA)n	Simple_repeat	1	38	(0)	1867697
521	30.2	9.1	1.7	chr19	38896214	38896389	(19721227)	C	L1ME3G	LINE/L1	(249)	675	576	1867698
556	26.9	6.3	8.4	chr19	38958719	38958893	(19658723)	+	MLT1G1	LTR/ERVL-MaLR	5	175	(404)	1867839
1689	16.1	1.3	3.2	chr19	38958894	38959209	(19658407)	C	AluJr	SINE/Alu	(2)	310	1	1867840
39	4.7	0.0	0.0	chr19	38989611	38989655	(19627961)	+	(CCCT)n	Simple_repeat	1	45	(0)	1867933
70	10.2	0.8	3.9	chr19	38989656	38989782	(19627834)	+	(TCTT)n	Simple_repeat	1	128	(0)	1867934
1933	15.0	0.0	2.5	chr19	38989783	38990102	(19627514)	C	AluJo	SINE/Alu	(0)	312	1	1867935
428	18.2	21.0	0.7	chr19	39038016	39038159	(19579457)	+	MER20B	DNA/hAT-Charlie	603	783	(0)	1868073
1681	16.0	6.3	9.3	chr19	39038387	39038494	(19579122)	+	MER66B	LTR/ERV1	1	85	(401)	1868074
1161	23.2	8.4	11.8	chr19	39102615	39102715	(19514901)	C	L1MC4a	LINE/L1	(633)	7249	7162	1868250
74	4.7	0.0	2.1	chr19	39102716	39102808	(19514808)	+	(TTTC)n	Simple_repeat	1	93	(0)	1868255
1161	23.2	8.4	11.8	chr19	39102809	39102834	(19514782)	C	L1MC4a	LINE/L1	(721)	7161	7161	1868250
2111	12.2	0.0	0.0	chr19	39102835	39103137	(19514479)	C	AluSq2	SINE/Alu	(10)	303	1	1868256
1682	19.5	1.3	1.6	chr19	39146556	39146862	(19470754)	+	AluJb	SINE/Alu	1	306	(6)	1868386
619	30.3	3.9	10.8	chr19	39146863	39146925	(19470691)	C	L2b	LINE/L2	(381)	2994	2931	1868384
3640	17.8	6.6	2.6	chr19	39146945	39147053	(19470563)	C	L1MD1	LINE/L1	(53)	6189	6082	1868387
2120	11.4	0.0	0.0	chr19	39266998	39267277	(19350339)	+	AluSg	SINE/Alu	1	280	(30)	1868700
43	0.0	0.0	4.3	chr19	39267291	39267336	(19350280)	+	(CT)n	Simple_repeat	1	46	(0)	1868701
29	21.6	0.0	2.6	chr19	39267337	39267380	(19350236)	+	(AT)n	Simple_repeat	1	44	(0)	1868702
30	14.0	0.0	4.9	chr19	39294508	39294568	(19323048)	+	GA-rich	Low_complexity	1	61	(0)	1868777
2246	20.3	2.6	3.6	chr19	39294569	39294763	(19322853)	C	MLT2B2	LTR/ERVL	(20)	495	301	1868778
310	29.9	10.6	6.3	chr19	39317078	39317284	(19300332)	+	L1MEg	LINE/L1	866	1082	(5002)	1868826
16	17.1	3.0	0.0	chr19	39320466	39320498	(19297118)	+	(CA)n	Simple_repeat	1	34	(0)	1868831
11	14.8	4.9	4.7	chr19	39320618	39320658	(19296958)	+	G-rich	Low_complexity	1	43	(0)	1868832
22	25.6	4.1	2.9	chr19	39320668	39320765	(19296851)	+	(CGCA)n	Simple_repeat	1	102	(0)	1868833
619	12.7	1.0	2.1	chr19	39403058	39403506	(19214110)	C	MSR1	Satellite	(0)	444	1	1869004
17	27.4	2.2	5.3	chr19	39409702	39409793	(19207823)	+	G-rich	Low_complexity	1	94	(0)	1869013
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
45	29.6	4.8	1.4	chr19	39516428	39516526	(19101090)	+	(TC)n	Simple_repeat	1	100	(0)	1869252
1672	13.3	0.3	9.1	chr19	39516527	39516694	(19100922)	C	AluJr	SINE/Alu	(10)	302	138	1869253
1070	23.4	3.8	14.0	chr19	39518301	39518538	(19099078)	C	L2a	LINE/L2	(420)	2999	2789	1869256
270	28.1	4.6	4.6	chr19	39996743	39996850	(18620766)	C	L2c	LINE/L2	(0)	3387	3280	1870082
62	2.9	2.8	0.0	chr19	40120750	40120821	(18496795)	+	(AAATG)n	Simple_repeat	1	74	(0)	1870258
2040	15.3	16.5	5.5	chr19	40120822	40120851	(18496765)	C	LTR54	LTR/ERV1	(312)	198	170	1870256
56	2.0	0.0	0.0	chr19	40120852	40120903	(18496713)	+	(TC)n	Simple_repeat	1	52	(0)	1870259
2040	15.3	16.5	5.5	chr19	40120904	40121062	(18496554)	C	LTR54	LTR/ERV1	(341)	169	3	1870256
2001	14.0	0.0	0.0	chr19	40386870	40387154	(18230462)	C	AluJb	SINE/Alu	(27)	285	1	1870932
32	30.8	2.1	2.1	chr19	40387155	40387250	(18230366)	+	(TC)n	Simple_repeat	1	96	(0)	1870933
34	26.5	3.0	2.2	chr19	40417083	40417213	(18200403)	+	(TCTC)n	Simple_repeat	1	135	(0)	1870999
13	9.8	9.1	0.0	chr19	40444351	40444383	(18173233)	+	(AGCCGCG)n	Simple_repeat	1	36	(0)	1871078
1950	15.3	2.6	1.9	chr19	40505104	40505410	(18112206)	+	AluJo	SINE/Alu	2	310	(2)	1871258
13	20.6	4.9	4.7	chr19	40570594	40570654	(18046962)	+	(CCGGCC)n	Simple_repeat	1	64	(0)	1871443
2147	13.2	0.0	1.3	chr19	40593782	40594084	(18023532)	C	AluSz	SINE/Alu	(0)	312	14	1871492
22	3.6	3.5	0.0	chr19	40594115	40594143	(18023473)	+	(GA)n	Simple_repeat	1	30	(0)	1871493
12	11.0	2.9	5.7	chr19	40602488	40602521	(18015095)	+	(GCCCA)n	Simple_repeat	1	35	(0)	1871503
13	32.6	0.0	0.0	chr19	40602563	40602607	(18015009)	+	(CTCC)n	Simple_repeat	1	45	(0)	1871504
27	24.3	1.3	1.2	chr19	40629914	40629992	(17987624)	+	(TCTC)n	Simple_repeat	1	80	(0)	1871551
32	27.1	3.8	4.7	chr19	40629993	40630091	(17987525)	+	(TTTCTC)n	Simple_repeat	6	190	(0)	1871552
2085	11.4	0.4	0.0	chr19	40630114	40630421	(17987195)	C	AluSx	SINE/Alu	(0)	312	2	1871553
35	0.0	0.0	0.0	chr19	40697823	40697852	(17919764)	+	(TA)n	Simple_repeat	1	30	(0)	1871723
23	0.0	0.0	0.0	chr19	40697853	40697877	(17919739)	+	(GA)n	Simple_repeat	1	25	(0)	1871724
2431	9.0	0.0	0.0	chr19	40697934	40698233	(17919383)	+	AluSq2	SINE/Alu	1	300	(13)	1871725
151	0.0	4.0	0.0	chr19	40848941	40849089	(17768527)	+	(AG)n	Simple_repeat	1	155	(0)	1872082
12	20.7	4.8	6.1	chr19	40849183	40849245	(17768371)	+	GA-rich	Low_complexity	1	66	(0)	1872083
75	0.0	0.0	0.0	chr19	40880799	40880862	(17736754)	+	(GA)n	Simple_repeat	1	64	(0)	1872150
16	23.6	3.2	3.1	chr19	40880869	40880931	(17736685)	+	A-rich	Low_complexity	1	65	(0)	1872151
12	31.2	2.0	0.0	chr19	40880973	40881021	(17736595)	+	GA-rich	Low_complexity	1	50	(0)	1872152
456	25.0	9.1	1.6	chr19	40920860	40920981	(17696635)	+	MIR	SINE/MIR	81	212	(50)	1872237
2098	11.3	4.5	11.2	chr19	40926162	40926571	(17691045)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1872245
42	2.4	0.0	0.0	chr19	40948761	40948803	(17668813)	+	(AAAT)n	Simple_repeat	1	43	(0)	1872299
32	13.2	0.0	0.0	chr19	40948804	40948853	(17668763)	+	(GA)n	Simple_repeat	1	50	(0)	1872300
14	10.0	3.9	9.3	chr19	41089744	41089795	(17527821)	+	(TCTGCT)n	Simple_repeat	1	54	(0)	1872567
80	0.0	0.0	0.0	chr19	41089805	41089872	(17527744)	+	(TC)n	Simple_repeat	1	68	(0)	1872568
331	23.7	19.5	3.5	chr19	41308116	41308316	(17309300)	C	L2b	LINE/L2	(1)	3374	3134	1873116
35	0.0	0.0	0.0	chr19	41378824	41378853	(17238763)	+	(GA)n	Simple_repeat	1	30	(0)	1873298
1982	14.3	0.0	0.7	chr19	41378854	41379133	(17238483)	C	AluJb	SINE/Alu	(34)	278	1	1873299
1325	15.1	6.0	16.0	chr19	41379199	41379535	(17238081)	+	AluJo	SINE/Alu	1	301	(11)	1873301
58	17.4	3.3	2.4	chr19	41379536	41379717	(17237899)	+	GA-rich	Low_complexity	1	183	(0)	1873302
428	23.9	7.0	3.6	chr19	41379718	41379884	(17237732)	C	MLT1G	LTR/ERVL-MaLR	(56)	513	294	1873303
439	27.9	1.1	6.0	chr19	41548998	41549180	(17068436)	C	MLT1D	LTR/ERVL-MaLR	(284)	221	48	1873576
49	2.2	0.0	0.0	chr19	41880376	41880421	(16737195)	+	(AG)n	Simple_repeat	1	46	(0)	1874111
67	0.0	0.0	2.9	chr19	41880438	41880506	(16737110)	+	(GGAA)n	Simple_repeat	1	69	(0)	1874112
78	30.2	1.0	3.5	chr19	41926875	41927187	(16690429)	+	GA-rich	Low_complexity	1	316	(0)	1874185
11	21.5	6.0	1.9	chr19	41928335	41928384	(16689232)	+	(GAGAGCT)n	Simple_repeat	1	53	(0)	1874188
13	23.8	3.9	1.9	chr19	41928395	41928445	(16689171)	+	(GCGG)n	Simple_repeat	1	53	(0)	1874189
35	9.8	0.0	0.0	chr19	41928464	41928518	(16689098)	+	(CTC)n	Simple_repeat	1	55	(0)	1874190
12	19.7	0.0	5.1	chr19	41928531	41928569	(16689047)	+	(GCCC)n	Simple_repeat	1	39	(0)	1874191
19	14.3	2.6	0.0	chr19	41928590	41928628	(16688988)	+	(GGC)n	Simple_repeat	1	40	(0)	1874192
11	19.6	0.0	8.3	chr19	41933109	41933156	(16684460)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	1874205
14	14.6	0.0	3.1	chr19	41940869	41940930	(16676686)	+	(CGC)n	Simple_repeat	1	60	(0)	1874217
34	8.4	2.0	0.0	chr19	41990327	41990377	(16627239)	+	(TC)n	Simple_repeat	1	52	(0)	1874327
15	8.5	0.0	0.0	chr19	41994191	41994215	(16623401)	+	(CGTC)n	Simple_repeat	1	25	(0)	1874331
993	26.9	7.4	2.0	chr19	42032266	42032622	(16584994)	+	L1ME3G	LINE/L1	169	546	(378)	1874420
662	28.4	14.5	8.7	chr19	42032624	42032989	(16584627)	+	L2b	LINE/L2	2407	2823	(596)	1874421
15	21.1	0.0	0.0	chr19	42087250	42087287	(16530329)	+	(TCTCAC)n	Simple_repeat	1	38	(0)	1874539
30	24.1	7.5	0.7	chr19	42149604	42149736	(16467880)	+	(AGAGAC)n	Simple_repeat	1	143	(0)	1874688
19	24.6	3.2	0.0	chr19	42176300	42176361	(16441255)	+	(TTTTAT)n	Simple_repeat	1	64	(0)	1874735
30	22.1	0.0	3.6	chr19	42177009	42177092	(16440524)	+	(GCGG)n	Simple_repeat	1	84	(0)	1874738
17	6.5	2.8	5.4	chr19	42177108	42177143	(16440473)	+	(GCCC)n	Simple_repeat	1	37	(0)	1874739
28	3.3	0.0	0.0	chr19	42177252	42177282	(16440334)	+	(CCCGCT)n	Simple_repeat	1	31	(0)	1874740
815	14.4	1.7	0.0	chr19	42182125	42182242	(16435374)	+	AluSz6	SINE/Alu	166	285	(27)	1874749
46	0.0	0.0	0.0	chr19	42182243	42182281	(16435335)	+	(AG)n	Simple_repeat	1	39	(0)	1874750
1087	26.9	7.2	8.2	chr19	42262023	42262188	(16355428)	+	L2a	LINE/L2	2196	2350	(1069)	1874911
44	6.9	3.8	2.4	chr19	42262189	42262268	(16355348)	+	(TC)n	Simple_repeat	1	83	(0)	1874912
1960	15.5	1.0	1.3	chr19	42262269	42262577	(16355039)	C	AluJo	SINE/Alu	(4)	308	1	1874913
12	28.5	4.6	1.5	chr19	42280618	42280682	(16336934)	+	(GCCG)n	Simple_repeat	1	68	(0)	1874952
13	15.4	0.0	3.2	chr19	42284093	42284123	(16333493)	+	(GCAC)n	Simple_repeat	1	31	(0)	1874957
17	23.3	0.0	0.0	chr19	42284254	42284298	(16333318)	+	GA-rich	Low_complexity	1	45	(0)	1874958
20	12.0	6.9	3.2	chr19	42284301	42284358	(16333258)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1874959
1846	17.4	0.0	5.2	chr19	42308216	42308390	(16309226)	C	AluJr4	SINE/Alu	(1)	311	145	1874993
22	12.0	4.4	0.0	chr19	42313328	42313372	(16304244)	+	(GCCGGA)n	Simple_repeat	1	47	(0)	1875003
19	11.5	2.5	2.4	chr19	42313400	42313439	(16304177)	+	(GCT)n	Simple_repeat	1	41	(0)	1875004
1281	18.9	0.3	9.9	chr19	42482764	42482926	(16134690)	C	AluJr	SINE/Alu	(168)	144	1	1875380
17	8.8	0.0	0.0	chr19	42482931	42482954	(16134662)	+	(TC)n	Simple_repeat	1	24	(0)	1875382
6538	19.7	2.2	1.8	chr19	43227347	43229535	(15388081)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	746	1876408
1473	23.4	1.3	1.6	chr19	43229563	43229871	(15387745)	C	HUERS-P3b-int	LTR/ERV1	(8348)	571	264	1876408
7791	8.7	0.2	0.1	chr19	43274230	43275235	(15342381)	C	LTR13	LTR/ERVK	(0)	1007	1	1876460
2868	0.7	0.0	0.0	chr19	43451180	43451486	(15166130)	+	AluYa5	SINE/Alu	1	307	(4)	1876801
1724	16.5	6.0	5.3	chr19	43451487	43451502	(15166114)	+	THE1D	LTR/ERVL-MaLR	190	210	(171)	1876800
36	5.2	0.0	0.0	chr19	43451503	43451542	(15166074)	+	(CT)n	Simple_repeat	1	40	(0)	1876802
1724	16.5	6.0	5.3	chr19	43451543	43451656	(15165960)	+	THE1D	LTR/ERVL-MaLR	211	321	(60)	1876800
42	0.0	0.0	0.0	chr19	43503281	43503316	(15114300)	+	(TC)n	Simple_repeat	1	36	(0)	1876953
1886	10.8	1.8	2.1	chr19	43503318	43503596	(15114020)	C	AluJo	SINE/Alu	(24)	288	11	1876954
738	16.8	12.3	0.0	chr19	43525641	43525789	(15091827)	C	MER96	DNA/hAT-Tip100	(0)	175	6	1877014
320	30.9	1.0	1.0	chr19	43530083	43530180	(15087436)	+	MIRc	SINE/MIR	61	158	(110)	1877027
14	24.2	2.3	0.0	chr19	43533433	43533476	(15084140)	+	(GGCAGC)n	Simple_repeat	1	45	(0)	1877038
22	21.3	2.0	0.0	chr19	43577303	43577351	(15040265)	+	GA-rich	Low_complexity	1	50	(0)	1877153
580	20.2	2.6	3.6	chr19	43609104	43609263	(15008353)	C	MIR	SINE/MIR	(63)	205	44	1877227
17	0.0	0.0	0.0	chr19	43609360	43609378	(15008238)	+	(GA)n	Simple_repeat	1	19	(0)	1877228
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
914	31.2	3.3	8.9	chr19	43633374	43633598	(14984018)	+	L2a	LINE/L2	3194	3421	(5)	1877284
21	14.0	4.9	0.0	chr19	43633627	43633667	(14983949)	+	(TC)n	Simple_repeat	1	43	(0)	1877287
1902	17.1	0.0	4.6	chr19	43633669	43633995	(14983621)	C	AluJo	SINE/Alu	(0)	312	1	1877288
13	16.5	0.0	8.3	chr19	43639541	43639588	(14978028)	+	(GCCCCC)n	Simple_repeat	1	48	(0)	1877297
389	23.7	5.2	2.3	chr19	43669362	43669490	(14948126)	+	MIR	SINE/MIR	58	183	(79)	1877377
314	24.8	16.9	0.0	chr19	43670360	43670472	(14947144)	+	MIR	SINE/MIR	17	152	(110)	1877380
287	21.4	13.2	0.0	chr19	43670480	43670591	(14947025)	+	L1MC5a	LINE/L1	2446	2574	(203)	1877381
1511	16.1	0.0	3.5	chr19	43674882	43675136	(14942480)	C	AluJo	SINE/Alu	(66)	246	1	1877399
72	32.1	1.4	0.7	chr19	43675214	43675489	(14942127)	+	(TCTC)n	Simple_repeat	1	280	(0)	1877400
189	19.4	0.0	0.0	chr19	43688250	43688285	(14929331)	+	MIRc	SINE/MIR	119	154	(114)	1877439
273	29.1	8.5	3.8	chr19	43984557	43984713	(14632903)	+	MIR	SINE/MIR	70	234	(28)	1878008
5948	20.2	5.5	4.2	chr19	44190635	44192284	(14425332)	C	MER65-int	LTR/ERV1	(1287)	4069	2693	1878343
26	14.3	5.6	0.0	chr19	44192287	44192340	(14425276)	+	GA-rich	Low_complexity	1	57	(0)	1878345
279	17.0	0.0	0.0	chr19	44192341	44192393	(14425223)	C	MER65-int	LTR/ERV1	(3787)	2852	2800	1878343
34	18.1	0.0	0.0	chr19	44541149	44541213	(14076403)	+	GA-rich	Low_complexity	1	65	(0)	1878937
290	18.0	0.0	0.0	chr19	44541288	44541337	(14076279)	C	MIR3	SINE/MIR	(60)	148	99	1878938
236	31.6	3.9	2.0	chr19	44578187	44578286	(14039330)	+	MIR	SINE/MIR	14	115	(147)	1879028
68	0.0	3.1	0.0	chr19	44578292	44578356	(14039260)	+	(TC)n	Simple_repeat	1	67	(0)	1879029
2089	12.2	0.3	0.7	chr19	44578360	44578645	(14038971)	C	AluSx3	SINE/Alu	(26)	285	1	1879030
11	25.8	0.0	7.8	chr19	44616723	44616769	(14000847)	+	A-rich	Low_complexity	16	59	(0)	1879128
31	7.7	0.0	0.0	chr19	44616875	44616916	(14000700)	+	(AG)n	Simple_repeat	1	42	(0)	1879129
1642	14.0	2.1	5.8	chr19	44616918	44617210	(14000406)	C	AluJr	SINE/Alu	(30)	282	1	1879130
350	31.6	14.6	2.2	chr19	44642439	44642530	(13975086)	+	L2a	LINE/L2	3020	3123	(252)	1879197
54	6.3	0.0	1.4	chr19	44642531	44642599	(13975017)	+	(TC)n	Simple_repeat	1	69	(0)	1879198
711	27.3	7.1	0.5	chr19	44642600	44642817	(13974799)	+	L2a	LINE/L2	3124	3426	(0)	1879197
1414	28.8	5.8	4.0	chr19	44676916	44677417	(13940199)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	11	1879304
43	0.0	4.5	0.0	chr19	44677433	44677476	(13940140)	+	(GA)n	Simple_repeat	1	46	(0)	1879306
198	34.5	9.8	2.9	chr19	44677495	44677664	(13939952)	C	L3	LINE/CR1	(176)	3923	3741	1879307
213	27.2	4.7	2.4	chr19	44682782	44682864	(13934752)	+	MIR1_Amn	SINE/MIR	87	172	(96)	1879322
240	32.2	5.9	0.0	chr19	44682845	44682987	(13934629)	C	MIR3	SINE/MIR	(54)	154	3	1879323
34	0.0	0.0	0.0	chr19	44683056	44683084	(13934532)	+	(CT)n	Simple_repeat	1	29	(0)	1879324
357	26.2	8.3	0.0	chr19	44748055	44748176	(13869440)	C	MIRb	SINE/MIR	(101)	167	35	1879521
18	31.9	0.0	0.0	chr19	44748429	44748491	(13869125)	+	(CCCCC)n	Simple_repeat	1	63	(0)	1879522
22	33.3	0.0	1.2	chr19	44845597	44845676	(13771940)	+	GA-rich	Low_complexity	1	80	(0)	1879787
190	28.8	0.0	4.8	chr19	44848457	44848518	(13769098)	+	MIRc	SINE/MIR	115	173	(95)	1879791
56	25.0	4.0	1.1	chr19	44848657	44848829	(13768787)	+	(CT)n	Simple_repeat	1	180	(0)	1879792
12	21.2	2.1	4.2	chr19	45001692	45001738	(13615878)	+	G-rich	Low_complexity	1	48	(0)	1880193
29	25.4	2.6	3.4	chr19	45076340	45076453	(13541163)	+	(GGCG)n	Simple_repeat	1	117	(0)	1880404
22	8.4	2.6	0.0	chr19	45467617	45467654	(13149962)	+	(GCGCGG)n	Simple_repeat	1	39	(0)	1881401
17	19.0	2.4	0.0	chr19	45467655	45467663	(13149953)	+	(GCGC)n	Simple_repeat	1	48	(0)	1881402
35	11.3	0.0	0.0	chr19	45662446	45662502	(12955114)	+	(TC)n	Simple_repeat	1	57	(0)	1881935
93	10.8	4.3	0.6	chr19	45959696	45959857	(12657759)	+	GA-rich	Low_complexity	1	169	(0)	1882684
76	8.2	3.4	0.0	chr19	46149139	46149257	(12468359)	+	(TC)n	Simple_repeat	1	123	(0)	1883020
3157	20.0	3.1	1.3	chr19	46205120	46205748	(12411868)	+	LTR9D	LTR/ERV1	1	641	(4)	1883119
784	18.7	10.5	0.7	chr19	46408861	46409015	(12208601)	+	AluJb	SINE/Alu	140	311	(1)	1883589
103	16.9	4.1	2.3	chr19	46409038	46409283	(12208333)	+	G-rich	Low_complexity	1	256	(0)	1883590
2185	8.3	0.7	0.0	chr19	46632667	46632942	(11984674)	+	AluSz	SINE/Alu	1	278	(34)	1884151
36	2.9	0.0	0.0	chr19	46632943	46632977	(11984639)	+	(TC)n	Simple_repeat	1	35	(0)	1884152
56	0.0	0.0	0.0	chr19	46632978	46633027	(11984589)	+	(ATAG)n	Simple_repeat	1	50	(0)	1884153
195	27.3	0.0	0.0	chr19	46633078	46633121	(11984495)	+	L2b	LINE/L2	3271	3314	(61)	1884154
15	37.4	0.0	2.2	chr19	46659873	46659964	(11957652)	+	A-rich	Low_complexity	1	92	(0)	1884227
12	24.8	0.0	0.0	chr19	46746024	46746057	(11871559)	+	(CCCG)n	Simple_repeat	1	34	(0)	1884424
13	5.3	0.0	0.0	chr19	46746071	46746090	(11871526)	+	(GGC)n	Simple_repeat	1	20	(0)	1884425
1884	14.2	5.8	0.3	chr19	46855461	46855755	(11761861)	+	AluSz6	SINE/Alu	1	312	(0)	1884756
1961	13.7	0.0	0.0	chr19	46855775	46856052	(11761564)	+	AluJb	SINE/Alu	8	285	(27)	1884757
24	11.1	6.1	0.0	chr19	46861071	46861119	(11756497)	+	(CCG)n	Simple_repeat	1	52	(0)	1884773
13	12.0	3.7	0.0	chr19	46861314	46861340	(11756276)	+	GA-rich	Low_complexity	1	28	(0)	1884774
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
15	12.0	0.0	3.3	chr19	47112359	47112388	(11505228)	+	(CCT)n	Simple_repeat	1	30	(0)	1885279
1710	12.8	0.7	15.1	chr19	47277496	47277662	(11339954)	C	AluSx1	SINE/Alu	(184)	128	1	1885718
798	27.2	4.1	0.9	chr19	47277663	47277765	(11339851)	+	MIR	SINE/MIR	116	223	(39)	1885717
27	24.1	0.0	0.0	chr19	47420836	47420911	(11196705)	+	(TCTCTC)n	Simple_repeat	1	76	(0)	1886120
27	0.0	0.0	0.0	chr19	47420911	47420940	(11196676)	+	(CA)n	Simple_repeat	1	30	(0)	1886121
40	0.0	0.0	0.0	chr19	47420941	47420974	(11196642)	+	(CT)n	Simple_repeat	1	34	(0)	1886122
90	29.6	3.1	1.4	chr19	47471043	47471395	(11146221)	+	GA-rich	Low_complexity	1	364	(0)	1886245
2056	10.6	0.0	1.7	chr19	47602310	47602610	(11015006)	+	AluSx3	SINE/Alu	5	300	(11)	1886544
27	27.9	1.3	8.2	chr19	47602611	47602634	(11014982)	+	GA-rich	Low_complexity	14	34	(0)	1886545
2040	10.9	0.0	2.6	chr19	47602635	47602937	(11014679)	+	AluSq2	SINE/Alu	1	295	(18)	1886546
38	34.3	2.9	0.6	chr19	47729812	47729866	(10887750)	+	(TC)n	Simple_repeat	1	82	(98)	1886902
12	25.3	1.8	5.2	chr19	47729867	47729923	(10887693)	+	(TCTTT)n	Simple_repeat	1	58	(0)	1886903
38	34.3	2.9	0.6	chr19	47729924	47729986	(10887630)	+	(TC)n	Simple_repeat	83	180	(0)	1886902
1109	9.7	0.0	0.0	chr19	47820335	47820479	(10797137)	+	AluSx3	SINE/Alu	163	307	(4)	1887153
31	0.0	0.0	0.0	chr19	47820515	47820541	(10797075)	+	(AG)n	Simple_repeat	1	27	(0)	1887154
1753	8.5	9.3	0.4	chr19	47849355	47849600	(10768016)	C	AluSx1	SINE/Alu	(7)	305	36	1887234
69	0.0	1.6	0.0	chr19	47849623	47849684	(10767932)	+	(AG)n	Simple_repeat	1	63	(0)	1887235
603	18.0	9.2	3.3	chr19	47969498	47969681	(10647935)	C	LTR41C	LTR/ERVL	(0)	701	506	1887583
49	0.0	0.0	0.0	chr19	47969685	47969726	(10647890)	+	(GA)n	Simple_repeat	1	42	(0)	1887584
41	7.3	0.0	0.0	chr19	48029780	48029837	(10587779)	+	(GAGA)n	Simple_repeat	1	58	(0)	1887752
1041	18.7	0.0	0.0	chr19	48274996	48275161	(10342455)	+	FRAM	SINE/Alu	1	166	(10)	1888342
50	27.1	0.8	0.0	chr19	48275163	48275290	(10342326)	+	GA-rich	Low_complexity	1	129	(0)	1888343
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
45	15.2	0.0	0.0	chr19	48390534	48390613	(10227003)	+	GA-rich	Low_complexity	1	80	(0)	1888646
2879	1.6	0.0	0.0	chr19	48402436	48402749	(10214867)	+	AluYb8	SINE/Alu	1	314	(4)	1888665
1808	26.7	5.4	12.6	chr19	48402750	48402765	(10214851)	C	L2a	LINE/L2	(918)	2501	2498	1888663
47	0.0	0.0	0.0	chr19	48402766	48402805	(10214811)	+	(GA)n	Simple_repeat	1	40	(0)	1888666
1808	26.7	5.4	12.6	chr19	48402806	48402916	(10214700)	C	L2a	LINE/L2	(922)	2497	2401	1888663
2446	10.1	0.0	0.0	chr19	48402917	48403223	(10214393)	+	AluSz	SINE/Alu	1	307	(5)	1888667
19	0.0	0.0	0.0	chr19	48503790	48503810	(10113806)	+	(TC)n	Simple_repeat	1	21	(0)	1888889
32	14.1	0.0	0.0	chr19	48503816	48503871	(10113745)	+	(TTCC)n	Simple_repeat	1	56	(0)	1888890
2299	9.8	0.0	0.0	chr19	48503872	48504167	(10113449)	C	AluSq2	SINE/Alu	(17)	296	1	1888891
19	0.0	4.2	0.0	chr19	48555486	48555509	(10062107)	+	(TC)n	Simple_repeat	1	25	(0)	1889047
47	0.0	0.0	0.0	chr19	48555550	48555589	(10062027)	+	(CT)n	Simple_repeat	1	40	(0)	1889048
1323	12.6	0.0	2.1	chr19	48555590	48555741	(10061875)	C	AluSz6	SINE/Alu	(27)	285	137	1889049
1477	13.8	0.0	20.4	chr19	48642944	48643117	(9974499)	+	AluJr4	SINE/Alu	1	167	(145)	1889262
31	0.0	0.0	5.3	chr19	48643118	48643155	(9974461)	+	(CTTC)n	Simple_repeat	1	38	(0)	1889263
1477	13.8	0.0	20.4	chr19	48643156	48643214	(9974402)	+	AluJr4	SINE/Alu	168	167	(145)	1889262
2300	10.3	0.0	0.0	chr19	48643215	48643505	(9974111)	C	AluSg	SINE/Alu	(17)	293	3	1889264
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
40	6.3	0.0	0.0	chr19	48655199	48655249	(9962367)	+	(AG)n	Simple_repeat	1	51	(0)	1889303
1925	9.5	0.4	8.2	chr19	48655250	48655418	(9962198)	C	AluSz	SINE/Alu	(30)	282	128	1889304
64	28.7	3.2	1.6	chr19	48868148	48868393	(9749223)	+	(TC)n	Simple_repeat	1	254	(0)	1889821
404	20.0	0.8	6.4	chr19	48868422	48868672	(9748944)	C	HERVIP10FH-int	LTR/ERV1	(4122)	980	744	1889822
26	11.2	0.0	0.0	chr19	49021405	49021443	(9596173)	+	(GA)n	Simple_repeat	1	39	(0)	1890205
21	7.6	0.0	0.0	chr19	49021443	49021470	(9596146)	+	(GT)n	Simple_repeat	1	28	(0)	1890206
25	8.3	0.0	0.0	chr19	49021536	49021573	(9596043)	+	(AGAG)n	Simple_repeat	1	38	(0)	1890207
24	6.6	0.0	0.0	chr19	49021573	49021604	(9596012)	+	(GT)n	Simple_repeat	1	32	(0)	1890208
16	20.8	4.3	2.1	chr19	49142348	49142393	(9475223)	+	(TC)n	Simple_repeat	1	48	(0)	1890463
39	32.6	1.9	0.6	chr19	49142477	49142636	(9474980)	+	(TCTCTC)n	Simple_repeat	1	163	(0)	1890464
2155	9.2	1.3	1.6	chr19	49147405	49147686	(9469930)	+	AluSz	SINE/Alu	2	286	(26)	1890475
33	3.1	0.0	0.0	chr19	49147687	49147719	(9469897)	+	(AG)n	Simple_repeat	1	33	(0)	1890476
2155	9.2	1.3	1.6	chr19	49147720	49147741	(9469875)	+	AluSz	SINE/Alu	287	305	(7)	1890475
655	21.5	0.0	1.3	chr19	49147744	49147894	(9469722)	C	MER5A1	DNA/hAT-Charlie	(17)	149	1	1890477
41	25.3	3.2	4.3	chr19	49164191	49164347	(9453269)	+	(TCCT)n	Simple_repeat	1	162	(0)	1890503
2155	10.6	1.0	2.0	chr19	49164348	49164681	(9452935)	C	AluSq2	SINE/Alu	(0)	313	1	1890504
1755	10.0	1.0	16.2	chr19	49285913	49286263	(9331353)	+	AluSg	SINE/Alu	1	297	(13)	1890801
40	0.0	0.0	0.0	chr19	49286264	49286297	(9331319)	+	(AG)n	Simple_repeat	1	34	(0)	1890802
12	11.7	10.8	0.0	chr19	49513504	49513540	(9104076)	+	(GCAG)n	Simple_repeat	1	41	(0)	1891261
30	35.6	2.2	0.0	chr19	49513652	49513789	(9103827)	+	(CT)n	Simple_repeat	1	141	(0)	1891262
29	0.0	0.0	0.0	chr19	49591791	49591818	(9025798)	+	(GCCGG)n	Simple_repeat	1	28	(0)	1891492
50	2.2	0.0	0.0	chr19	49622929	49622975	(8994641)	+	(AG)n	Simple_repeat	1	47	(0)	1891559
2017	11.3	0.7	4.3	chr19	49819826	49820126	(8797490)	C	AluSx	SINE/Alu	(13)	299	10	1892013
4588	7.0	6.4	1.1	chr19	49820127	49820763	(8796853)	C	LTR76	LTR/ERV1	(2)	673	1	1892014
24	32.0	0.0	3.9	chr19	50147572	50147674	(8469942)	+	GA-rich	Low_complexity	1	103	(0)	1892775
255	26.8	19.8	0.0	chr19	50147795	50147891	(8469725)	+	MIRb	SINE/MIR	33	153	(115)	1892776
60	0.0	0.0	0.0	chr19	50163972	50164022	(8453594)	+	(AG)n	Simple_repeat	1	51	(0)	1892821
1888	12.4	0.0	0.0	chr19	50164024	50164280	(8453336)	C	AluSz	SINE/Alu	(35)	277	21	1892822
167	33.9	2.5	0.6	chr19	50169335	50169416	(8448200)	+	(CTCT)n	Simple_repeat	1	85	(0)	1892836
33	3.1	0.0	0.0	chr19	50169417	50169449	(8448167)	+	(TC)n	Simple_repeat	1	33	(0)	1892837
167	33.9	2.5	0.6	chr19	50169450	50170130	(8447486)	+	(CTCT)n	Simple_repeat	2	693	(0)	1892838
1651	14.1	1.0	5.9	chr19	50206932	50207237	(8410379)	+	AluJo	SINE/Alu	1	291	(21)	1892971
80	2.6	0.0	0.0	chr19	50207238	50207314	(8410302)	+	(AG)n	Simple_repeat	1	77	(0)	1892972
4544	13.5	7.3	1.3	chr19	50367269	50367536	(8250080)	C	L1M1	LINE/L1	(5517)	2048	1756	1893347
60	4.8	0.0	0.0	chr19	50367537	50367601	(8250015)	+	(TC)n	Simple_repeat	1	65	(0)	1893353
4544	13.5	7.3	1.3	chr19	50367602	50367875	(8249741)	C	L1M1	LINE/L1	(5810)	1755	1457	1893347
21	4.0	0.0	0.0	chr19	50626946	50626971	(7990645)	+	(AG)n	Simple_repeat	1	26	(0)	1893955
224	32.5	4.3	3.1	chr19	50627126	50627287	(7990329)	+	L2b	LINE/L2	2961	3124	(251)	1893956
917	15.4	18.0	1.8	chr19	50662955	50663172	(7954444)	C	MIR	SINE/MIR	(0)	262	2	1894040
36	24.6	4.0	2.3	chr19	50663199	50663323	(7954293)	+	GA-rich	Low_complexity	1	130	(0)	1894041
312	30.9	9.2	3.9	chr19	50663374	50663712	(7953904)	+	L2a	LINE/L2	3021	3374	(1)	1894042
39	18.8	2.7	3.5	chr19	50719701	50719869	(7897747)	+	(CCTC)n	Simple_repeat	1	167	(0)	1894158
14	33.9	0.0	4.5	chr19	50719891	50719978	(7897638)	+	(CGCCCC)n	Simple_repeat	1	88	(0)	1894159
1254	18.6	5.2	0.0	chr19	50774176	50774411	(7843205)	+	AluJb	SINE/Alu	37	285	(27)	1894308
18	4.3	0.0	0.0	chr19	50774412	50774432	(7843184)	+	(CT)n	Simple_repeat	2	22	(0)	1894309
18	0.0	0.0	0.0	chr19	50774432	50774451	(7843165)	+	(CA)n	Simple_repeat	1	20	(0)	1894310
34	0.0	0.0	0.0	chr19	50774455	50774483	(7843133)	+	(AG)n	Simple_repeat	1	29	(0)	1894311
1477	17.7	7.7	0.0	chr19	50777267	50777390	(7840226)	C	AluJo	SINE/Alu	(185)	127	1	1894318
653	31.4	7.9	4.3	chr19	50777391	50777411	(7840205)	+	L1MC	LINE/L1	3018	3037	(3109)	1894316
40	2.6	0.0	0.0	chr19	50777412	50777450	(7840166)	+	(AG)n	Simple_repeat	1	39	(0)	1894320
653	31.4	7.9	4.3	chr19	50777451	50777615	(7840001)	+	L1MC	LINE/L1	3038	3222	(2924)	1894316
35	16.6	1.4	1.4	chr19	50910907	50910975	(7706641)	+	GA-rich	Low_complexity	1	70	(0)	1894572
62	28.2	2.3	3.4	chr19	50911610	50911867	(7705749)	+	(TCTCTT)n	Simple_repeat	1	264	(0)	1894573
64	25.6	4.1	1.7	chr19	50931063	50931157	(7686459)	+	(CT)n	Simple_repeat	1	121	(109)	1894631
12	21.1	0.0	4.8	chr19	50931158	50931199	(7686417)	+	(TCCTCCC)n	Simple_repeat	1	42	(0)	1894632
64	25.6	4.1	1.7	chr19	50931200	50931283	(7686333)	+	(CT)n	Simple_repeat	122	230	(0)	1894631
663	15.3	0.8	0.8	chr19	50931377	50931499	(7686117)	+	FLAM_C	SINE/Alu	10	133	(0)	1894633
984	23.9	0.0	0.0	chr19	50978074	50978249	(7639367)	C	MER45A	DNA/hAT-Tip100	(1)	177	2	1894741
185	24.8	4.5	1.8	chr19	50978382	50979004	(7638612)	+	GA-rich	Low_complexity	1	651	(0)	1894742
307	30.4	2.3	0.7	chr19	50980567	50981679	(7635937)	+	GA-rich	Low_complexity	1	1139	(0)	1894745
44	0.0	0.0	0.0	chr19	51020199	51020236	(7597380)	+	(AG)n	Simple_repeat	1	38	(0)	1894830
54	29.7	2.6	2.6	chr19	51034165	51034391	(7583225)	+	GA-rich	Low_complexity	1	233	(0)	1894862
152	28.0	3.7	1.8	chr19	51083231	51083511	(7534105)	+	GA-rich	Low_complexity	1	280	(0)	1894976
62	1.8	0.0	0.0	chr19	51178474	51178530	(7439086)	+	(AG)n	Simple_repeat	1	57	(0)	1895130
38	6.5	0.0	0.0	chr19	51410965	51411013	(7206603)	+	(AG)n	Simple_repeat	1	49	(0)	1895569
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
12	14.7	3.3	0.0	chr19	51691132	51691161	(6926455)	+	(CCAGCC)n	Simple_repeat	1	31	(0)	1896054
96	28.0	5.8	1.5	chr19	51691175	51691606	(6926010)	+	GA-rich	Low_complexity	1	457	(0)	1896055
39	17.2	4.2	2.0	chr19	52188857	52188951	(6428665)	+	GA-rich	Low_complexity	1	99	(0)	1896963
480	21.4	2.8	0.0	chr19	52943094	52943196	(5674420)	+	FLAM_A	SINE/Alu	3	108	(34)	1898517
418	13.8	4.1	6.0	chr19	52943260	52943359	(5674257)	C	L1M4	LINE/L1	(1160)	4986	4889	1898518
121	3.3	0.8	0.0	chr19	53506401	53506524	(5111092)	+	(CT)n	Simple_repeat	1	125	(0)	1899483
1895	12.3	5.0	0.7	chr19	53985567	53985851	(4631765)	+	AluJb	SINE/Alu	1	298	(14)	1900745
252	28.3	9.5	5.3	chr19	54014850	54015055	(4602561)	+	MIR	SINE/MIR	35	234	(28)	1900824
74	4.0	0.0	0.0	chr19	54015334	54015412	(4602204)	+	(CCTT)n	Simple_repeat	1	79	(0)	1900825
36	2.7	0.0	2.5	chr19	54017623	54017662	(4599954)	+	(TC)n	Simple_repeat	1	40	(0)	1900837
21	30.5	4.5	2.6	chr19	54017667	54017777	(4599839)	+	(CTC)n	Simple_repeat	1	116	(0)	1900838
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
256	18.4	4.5	1.6	chr19	54133722	54134358	(4483258)	+	(TCCC)n	Simple_repeat	1	666	(0)	1901162
188	35.5	5.1	2.1	chr19	54210081	54210175	(4407441)	C	L2a	LINE/L2	(17)	3409	3312	1901312
274	18.1	7.3	3.8	chr19	54411040	54411303	(4206313)	+	HERVIP10FH-int	LTR/ERV1	740	1013	(4089)	1901690
59	0.0	0.0	0.0	chr19	54411498	54411547	(4206069)	+	(GT)n	Simple_repeat	1	50	(0)	1901691
171	22.0	3.4	0.2	chr19	55066362	55066775	(3550841)	+	(TC)n	Simple_repeat	1	428	(0)	1902927
520	30.1	7.2	5.9	chr19	55066855	55067073	(3550543)	+	MLT1G1	LTR/ERVL-MaLR	368	589	(2)	1902928
134	22.6	1.8	1.8	chr19	55067866	55068202	(3549414)	+	(TC)n	Simple_repeat	1	343	(0)	1902931
229	27.8	8.5	1.0	chr19	55280603	55280700	(3336916)	+	MIR3	SINE/MIR	41	146	(62)	1903375
1323	27.4	2.4	10.6	chr19	55331126	55331416	(3286200)	C	MLT1F	LTR/ERVL-MaLR	(44)	504	229	1903506
73	0.0	0.0	0.0	chr19	55331417	55331478	(3286138)	+	(CT)n	Simple_repeat	1	62	(0)	1903507
2118	10.3	0.3	3.3	chr19	55338050	55338349	(3279267)	+	AluSq2	SINE/Alu	1	291	(22)	1903534
1044	11.6	0.0	0.0	chr19	55338350	55338487	(3279129)	+	AluSx	SINE/Alu	134	271	(41)	1903535
63	3.2	0.0	0.0	chr19	55338490	55338552	(3279064)	+	(CT)n	Simple_repeat	1	63	(0)	1903536
32	10.4	1.9	1.8	chr19	55338553	55338606	(3279010)	+	(AC)n	Simple_repeat	1	55	(0)	1903537
722	26.9	12.6	4.0	chr19	55462351	55462659	(3154957)	+	L2a	LINE/L2	2857	3213	(213)	1903781
209	25.5	1.7	2.8	chr19	55563549	55564190	(3053426)	+	(CT)n	Simple_repeat	1	653	(0)	1904023
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
15	10.4	3.0	2.9	chr19	55675287	55675319	(2942297)	+	(GGC)n	Simple_repeat	1	34	(0)	1904272
12	25.8	0.0	0.0	chr19	55675311	55675347	(2942269)	+	(GCGT)n	Simple_repeat	1	37	(0)	1904273
1790	12.2	0.7	6.3	chr19	55853397	55853699	(2763917)	C	AluJb	SINE/Alu	(16)	296	11	1904590
343	21.0	12.6	5.5	chr19	55853700	55853764	(2763852)	C	L1MEg	LINE/L1	(5960)	1143	1080	1904588
107	17.3	0.0	0.0	chr19	55853765	55853956	(2763660)	+	(CTCT)n	Simple_repeat	1	192	(0)	1904591
2244	13.1	0.0	0.6	chr19	55853958	55854271	(2763345)	C	AluSx1	SINE/Alu	(0)	312	1	1904592
1841	8.5	0.0	4.0	chr19	57011227	57011474	(1606142)	C	AluSx1	SINE/Alu	(74)	238	1	1906963
130	10.4	11.9	0.3	chr19	57011475	57011677	(1605939)	+	(TCTCTC)n	Simple_repeat	4	220	(0)	1906964
1436	18.6	5.0	0.0	chr19	57011730	57012014	(1605602)	C	L1PA16	LINE/L1	(3)	6163	5864	1906965
1240	22.9	3.0	1.9	chr19	57382983	57383252	(1234364)	C	LTR49-int	LTR/ERV1	(3549)	2397	2033	1907710
39	2.7	0.0	0.0	chr19	57383254	57383291	(1234325)	+	(GA)n	Simple_repeat	1	38	(0)	1907715
396	22.1	4.6	0.0	chr19	57383309	57383412	(1234204)	C	MER89	LTR/ERV1	(450)	109	1	1907716
2472	7.0	0.3	0.7	chr19	58241496	58241796	(375820)	C	AluY	SINE/Alu	(11)	300	1	1909177
21	0.0	0.0	0.0	chr19	58241922	58241944	(375672)	+	(TC)n	Simple_repeat	1	23	(0)	1909178
50	0.0	0.0	0.0	chr2	986068	986110	(241207419)	+	(AG)n	Simple_repeat	1	43	(0)	1911787
211	14.4	0.6	8.2	chr2	1719888	1720432	(240473097)	+	GA-rich	Low_complexity	1	548	(0)	1912446
264	17.2	4.5	1.5	chr2	1720462	1720526	(240473003)	C	MLT2D	LTR/ERVL	(50)	510	444	1912444
316	23.1	1.1	1.2	chr2	1866372	1867120	(240326409)	+	GA-rich	Low_complexity	1	757	(0)	1912599
109	20.2	2.3	1.9	chr2	2295728	2295991	(239897538)	+	GA-rich	Low_complexity	1	270	(0)	1913070
55	16.3	6.8	1.3	chr2	8681665	8681812	(233511717)	+	(CCCTCCT)n	Simple_repeat	1	158	(0)	1921728
350	36.4	2.6	2.1	chr2	9011239	9011426	(233182103)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1922174
77	1.4	0.0	0.0	chr2	9193872	9193941	(232999588)	+	(TC)n	Simple_repeat	1	70	(0)	1922535
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
18	25.3	1.9	0.0	chr2	9951716	9951767	(232241762)	+	(CCG)n	Simple_repeat	1	53	(0)	1923945
399	11.5	14.5	6.2	chr2	10120423	10120535	(232072994)	+	FLAM_C	SINE/Alu	12	135	(8)	1924224
349	18.3	18.1	3.7	chr2	10135551	10135658	(232057871)	+	L1MEd	LINE/L1	2018	2144	(4942)	1924237
443	33.6	8.0	2.7	chr2	10480367	10480830	(231712699)	C	L1MC4	LINE/L1	(1206)	1369	948	1924839
43	27.3	0.9	0.0	chr2	10480833	10480945	(231712584)	+	(TCTC)n	Simple_repeat	1	114	(0)	1924840
3667	15.2	5.2	4.8	chr2	10551418	10552021	(231641508)	+	MER50	LTR/ERV1	129	733	(1)	1924960
31	2.8	2.6	2.5	chr2	10552088	10552126	(231641403)	+	(CT)n	Simple_repeat	1	40	(0)	1924962
996	27.8	10.6	0.8	chr2	10595002	10595063	(231598466)	+	HAL1	LINE/L1	2133	2196	(311)	1925029
287	26.8	4.0	3.4	chr2	10595072	10595144	(231598385)	+	HAL1	LINE/L1	2276	2346	(161)	1925029
41	0.0	0.0	0.0	chr2	10595145	10595179	(231598350)	+	(AG)n	Simple_repeat	1	35	(0)	1925031
287	26.8	4.0	3.4	chr2	10595180	10595252	(231598277)	+	HAL1	LINE/L1	2347	2423	(84)	1925029
1618	13.1	7.8	0.4	chr2	10595317	10595575	(231597954)	C	AluJb	SINE/Alu	(10)	302	23	1925032
2289	10.6	0.0	0.0	chr2	11295675	11295966	(230897563)	+	AluSx	SINE/Alu	1	292	(20)	1926370
92	0.0	2.4	0.0	chr2	11295967	11296051	(230897478)	+	(AG)n	Simple_repeat	1	87	(0)	1926371
47	6.2	1.4	2.8	chr2	11700453	11700523	(230493006)	+	(TC)n	Simple_repeat	1	72	(0)	1927114
559	29.9	10.8	12.1	chr2	12228135	12228587	(229964942)	C	MLT1J2	LTR/ERVL-MaLR	(2)	446	1	1927965
4992	14.5	3.3	1.4	chr2	12303886	12304772	(229888757)	+	MER4D1	LTR/ERV1	1	869	(31)	1928080
218	23.1	7.1	0.0	chr2	12304786	12304837	(229888692)	+	MIR3	SINE/MIR	93	148	(60)	1928081
1675	15.8	3.4	11.8	chr2	12463162	12463578	(229729951)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1928366
58	1.9	0.0	0.0	chr2	12520392	12520445	(229673084)	+	(AG)n	Simple_repeat	1	54	(0)	1928468
12	18.1	2.4	4.8	chr2	12520460	12520500	(229673029)	+	A-rich	Low_complexity	1	42	(0)	1928469
1515	20.5	8.4	1.8	chr2	15259282	15259764	(226933765)	+	MER67B	LTR/ERV1	1	418	(243)	1932439
469	23.8	3.7	1.6	chr2	15259735	15259965	(226933564)	+	MER67B	LTR/ERV1	273	543	(0)	1932439
396	34.3	5.0	0.9	chr2	15901084	15901295	(226292234)	+	MLT1F1	LTR/ERVL-MaLR	1	221	(339)	1933534
24	14.0	0.0	2.4	chr2	15901331	15901372	(226292157)	+	(TC)n	Simple_repeat	1	42	(0)	1933535
914	22.1	11.3	1.5	chr2	15901373	15901689	(226291840)	+	MLT1F1	LTR/ERVL-MaLR	184	569	(0)	1933534
13	16.9	0.0	8.5	chr2	17538994	17539040	(224654489)	+	(CCGCGCT)n	Simple_repeat	1	47	(0)	1936102
2164	11.0	0.3	3.9	chr2	19288745	19289053	(222904476)	C	AluSx3	SINE/Alu	(13)	298	1	1938614
34	0.0	0.0	0.0	chr2	19289098	19289126	(222904403)	+	(TC)n	Simple_repeat	1	29	(0)	1938615
37	0.0	0.0	0.0	chr2	19289149	19289180	(222904349)	+	(AG)n	Simple_repeat	1	32	(0)	1938616
34	0.0	3.0	0.0	chr2	19677337	19677369	(222516160)	+	(TC)n	Simple_repeat	1	34	(0)	1939142
430	19.5	6.8	0.0	chr2	19774167	19774248	(222419281)	C	MER91C	DNA/hAT-Tip100	(0)	140	53	1939282
53	0.0	0.0	0.0	chr2	19774269	19774313	(222419216)	+	(CT)n	Simple_repeat	1	45	(0)	1939283
352	32.2	11.0	0.0	chr2	19774332	19774533	(222418996)	C	Tigger12c	DNA/TcMar-Tigger	(490)	244	18	1939281
54	0.0	0.0	0.0	chr2	19812752	19812797	(222380732)	+	(CT)n	Simple_repeat	1	46	(0)	1939328
25	0.0	0.0	0.0	chr2	23536891	23536918	(218656611)	+	(CA)n	Simple_repeat	1	28	(0)	1944500
38	8.3	0.0	0.0	chr2	23536919	23536969	(218656560)	+	(CT)n	Simple_repeat	1	51	(0)	1944501
2350	9.2	0.3	0.0	chr2	23605774	23606068	(218587461)	C	AluSz6	SINE/Alu	(16)	296	1	1944595
31	3.3	0.0	0.0	chr2	23606140	23606170	(218587359)	+	(GT)n	Simple_repeat	1	31	(0)	1944596
50	11.6	3.5	0.0	chr2	23606174	23606258	(218587271)	+	GA-rich	Low_complexity	1	88	(0)	1944597
74	0.0	0.0	0.0	chr2	23670918	23670980	(218522549)	+	(CT)n	Simple_repeat	1	63	(0)	1944676
349	33.6	1.9	0.0	chr2	23921386	23921489	(218272040)	+	L4_B_Mam	LINE/RTE-X	4098	4203	(738)	1945104
3611	14.1	2.7	4.8	chr2	24350347	24351030	(217842499)	+	L1MB7	LINE/L1	5516	6184	(0)	1945919
5106	16.0	5.7	0.0	chr2	24385381	24385735	(217807794)	C	L1M1	LINE/L1	(5418)	2147	1757	1946007
50	0.0	0.0	0.0	chr2	24385736	24385778	(217807751)	+	(TC)n	Simple_repeat	1	43	(0)	1946008
5106	16.0	5.7	0.0	chr2	24385779	24386249	(217807280)	C	L1M1	LINE/L1	(5809)	1756	1272	1946007
362	23.1	0.0	0.0	chr2	24540301	24540391	(217653138)	+	L1MEi	LINE/L1	841	931	(1281)	1946336
14	7.2	6.9	0.0	chr2	25604357	25604385	(216589144)	+	(TTTTC)n	Simple_repeat	1	31	(0)	1948212
1761	18.6	0.6	4.3	chr2	25604398	25604586	(216588943)	C	AluJr	SINE/Alu	(1)	311	124	1948213
474	28.2	7.5	5.7	chr2	26012264	26012454	(216181075)	+	L2a	LINE/L2	3193	3426	(0)	1949125
241	29.5	11.1	3.3	chr2	26012467	26012648	(216180881)	C	MamRep605	LTR?	(214)	635	438	1949126
54	6.1	0.0	0.0	chr2	26014468	26014536	(216178993)	+	(AG)n	Simple_repeat	1	69	(0)	1949133
1544	18.5	2.8	2.5	chr2	26014537	26014817	(216178712)	C	AluJb	SINE/Alu	(30)	282	1	1949134
26	17.1	0.0	0.0	chr2	26692470	26692576	(215500953)	+	(TC)n	Simple_repeat	1	107	(0)	1950404
44	0.0	0.0	0.0	chr2	26892757	26892794	(215300735)	+	(GA)n	Simple_repeat	1	38	(0)	1950838
1228	25.2	4.6	10.8	chr2	26940342	26940504	(215253025)	C	L1ME4a	LINE/L1	(1)	6123	5946	1950923
577	6.8	0.0	0.0	chr2	27051214	27051287	(215142242)	+	tRNA-Ala-GCY	tRNA	1	74	(2)	1951108
2253	10.2	0.3	0.0	chr2	27116575	27116868	(215076661)	C	AluSx	SINE/Alu	(17)	295	1	1951203
62	0.0	0.0	0.0	chr2	27116872	27116924	(215076605)	+	(TC)n	Simple_repeat	1	53	(0)	1951204
2119	12.2	0.7	0.0	chr2	27116925	27117210	(215076319)	C	AluSz	SINE/Alu	(24)	288	1	1951205
3942	24.3	6.9	8.5	chr2	27945334	27947106	(214246423)	C	L1ME1	LINE/L1	(1274)	5045	3303	1952775
183	33.6	9.9	3.3	chr2	28092728	28092749	(214100780)	+	L2c	LINE/L2	3181	3209	(166)	1952980
38	4.9	0.0	0.0	chr2	28092750	28092791	(214100738)	+	(CT)n	Simple_repeat	1	42	(0)	1952981
231	33.4	3.4	8.4	chr2	28092792	28092919	(214100610)	+	L2c	LINE/L2	3210	3347	(40)	1952980
25	27.4	4.2	0.0	chr2	28392892	28392933	(213800596)	+	(CGAG)n	Simple_repeat	1	71	(29)	1953485
23	11.2	0.0	0.0	chr2	28392934	28392972	(213800557)	+	(GAGAGA)n	Simple_repeat	1	39	(0)	1953486
25	27.4	4.2	0.0	chr2	28392973	28392987	(213800542)	+	(CGAG)n	Simple_repeat	72	100	(0)	1953485
1705	21.2	7.5	10.4	chr2	28706666	28706798	(213486731)	+	MLT1D	LTR/ERVL-MaLR	108	216	(289)	1954055
70	0.0	0.0	0.0	chr2	28706799	28706858	(213486671)	+	(AG)n	Simple_repeat	1	60	(0)	1954057
1705	21.2	7.5	10.4	chr2	28706859	28707117	(213486412)	+	MLT1D	LTR/ERVL-MaLR	217	505	(0)	1954055
1157	22.7	14.2	2.1	chr2	30693285	30693450	(211500079)	+	MLT1A	LTR/ERVL-MaLR	1	198	(176)	1957424
121	0.8	3.3	0.0	chr2	30693451	30693571	(211499958)	+	(TC)n	Simple_repeat	1	125	(0)	1957425
291	19.3	3.4	0.0	chr2	31996114	31996170	(210197359)	+	Alu	SINE/Alu	2	60	(73)	1959252
43	10.1	1.5	0.0	chr2	31996171	31996235	(210197294)	+	(GA)n	Simple_repeat	1	66	(0)	1959253
512	24.8	2.9	3.8	chr2	31996238	31996270	(210197259)	+	L1ME4b	LINE/L1	2657	2689	(3630)	1959245
2192	12.0	1.3	0.0	chr2	31996271	31996570	(210196959)	+	AluSz	SINE/Alu	6	309	(3)	1959254
34	7.4	0.0	0.0	chr2	32499500	32499542	(209693987)	+	(TC)n	Simple_repeat	1	43	(0)	1960417
39	9.5	0.0	0.0	chr2	32905728	32905785	(209287744)	+	(GAGA)n	Simple_repeat	1	58	(0)	1961167
25	16.0	5.5	2.6	chr2	32947058	32947130	(209246399)	+	(CCCGCTC)n	Simple_repeat	1	77	(0)	1961244
981	17.6	1.1	0.0	chr2	33589746	33589921	(208603608)	+	MER58A	DNA/hAT-Charlie	47	224	(0)	1962223
1634	15.1	0.0	0.8	chr2	35351604	35351842	(206841687)	+	AluSz	SINE/Alu	27	263	(49)	1964671
79	0.0	1.4	0.0	chr2	35351850	35351920	(206841609)	+	(AG)n	Simple_repeat	1	72	(0)	1964672
2122	12.9	7.2	0.8	chr2	36765250	36765414	(205428115)	C	THE1C	LTR/ERVL-MaLR	(0)	375	195	1966490
33	3.1	0.0	0.0	chr2	36765415	36765447	(205428082)	+	(GA)n	Simple_repeat	1	33	(0)	1966491
2122	12.9	7.2	0.8	chr2	36765448	36765632	(205427897)	C	THE1C	LTR/ERVL-MaLR	(181)	194	2	1966490
1354	23.5	5.7	5.2	chr2	37532892	37533247	(204660282)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	190	1967873
60	1.8	0.0	0.0	chr2	37533248	37533303	(204660226)	+	(GA)n	Simple_repeat	1	56	(0)	1967874
1354	23.5	5.7	5.2	chr2	37533304	37533314	(204660215)	C	MLT1F	LTR/ERVL-MaLR	(359)	189	179	1967873
1072	4.7	0.0	2.3	chr2	37533325	37533452	(204660077)	C	AluYc	SINE/Alu	(10)	289	165	1967875
2935	27.0	7.6	2.3	chr2	37846143	37846335	(204347194)	+	L2	LINE/L2	1512	1725	(1694)	1968332
105	8.9	3.4	0.0	chr2	37846336	37846513	(204347016)	+	(TC)n	Simple_repeat	1	184	(0)	1968333
2935	27.0	7.6	2.3	chr2	37846514	37847335	(204346194)	+	L2	LINE/L2	1726	2585	(834)	1968332
11	25.7	0.0	7.8	chr2	37924965	37925028	(204268501)	+	G-rich	Low_complexity	1	64	(0)	1968476
380	29.6	9.3	4.3	chr2	38014747	38015000	(204178529)	C	L2c	LINE/L2	(0)	3387	3120	1968575
106	12.4	0.0	0.0	chr2	38088745	38088910	(204104619)	+	(TCTC)n	Simple_repeat	1	166	(0)	1968669
180	23.3	10.4	1.6	chr2	38230415	38230475	(203963054)	C	MIR3	SINE/MIR	(0)	208	142	1968862
30	3.5	0.0	0.0	chr2	38230615	38230644	(203962885)	+	(GA)n	Simple_repeat	1	30	(0)	1968863
2368	9.4	0.7	0.0	chr2	38257531	38257829	(203935700)	+	AluSx	SINE/Alu	2	302	(10)	1968904
47	2.3	0.0	0.0	chr2	38257830	38257874	(203935655)	+	(AG)n	Simple_repeat	1	45	(0)	1968905
1650	16.4	2.1	2.5	chr2	38257875	38258065	(203935464)	C	AluJb	SINE/Alu	(117)	195	1	1968903
197	23.3	3.7	16.9	chr2	38396238	38396361	(203797168)	C	X6B_LINE	LINE/CR1	(41)	1031	925	1969136
307	34.2	15.1	6.2	chr2	38440845	38441246	(203752283)	C	L2b	LINE/L2	(1)	3374	2931	1969229
49	2.2	0.0	0.0	chr2	38488562	38488607	(203704922)	+	(CT)n	Simple_repeat	1	46	(0)	1969336
26	6.1	0.0	0.0	chr2	39120971	39121004	(203072525)	+	(GCC)n	Simple_repeat	1	34	(0)	1970592
19	11.2	0.0	0.0	chr2	39121123	39121151	(203072378)	+	(GA)n	Simple_repeat	1	29	(0)	1970593
12	13.9	0.0	0.0	chr2	39486809	39486832	(202706697)	+	(GTTC)n	Simple_repeat	1	24	(0)	1971298
83	8.8	0.0	0.0	chr2	39486843	39486953	(202706576)	+	(TC)n	Simple_repeat	1	111	(0)	1971299
2396	10.0	0.7	0.3	chr2	39486954	39487251	(202706278)	C	AluSz	SINE/Alu	(12)	300	1	1971300
51	0.0	0.0	0.0	chr2	41939326	41939369	(200254160)	+	(TC)n	Simple_repeat	1	44	(0)	1974673
49	0.0	0.0	0.0	chr2	42154590	42154631	(200038898)	+	(TC)n	Simple_repeat	1	42	(0)	1975047
798	26.7	8.5	4.0	chr2	42154640	42154752	(200038777)	C	L1ME4a	LINE/L1	(147)	5977	5856	1975048
49	2.2	0.0	0.0	chr2	42667612	42667657	(199525872)	+	(AG)n	Simple_repeat	1	46	(0)	1976120
927	15.1	0.0	4.1	chr2	42667661	42667806	(199525723)	C	AluJo	SINE/Alu	(38)	274	135	1976121
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
3721	22.5	4.5	10.2	chr2	42871976	42872199	(199321330)	+	L1ME3A	LINE/L1	3061	3262	(2884)	1976464
45	2.4	0.0	0.0	chr2	42872200	42872242	(199321287)	+	(AG)n	Simple_repeat	1	43	(0)	1976470
3721	22.5	4.5	10.2	chr2	42872243	42872456	(199321073)	+	L1ME3A	LINE/L1	3263	3460	(2686)	1976464
44	0.0	0.0	0.0	chr2	42925376	42925413	(199268116)	+	(AG)n	Simple_repeat	1	38	(0)	1976561
60	8.1	0.0	0.0	chr2	43025275	43025352	(199168177)	+	(CT)n	Simple_repeat	1	78	(0)	1976735
92	3.3	0.0	0.0	chr2	43046824	43046915	(199146614)	+	(TC)n	Simple_repeat	1	92	(0)	1976772
92	2.3	0.0	0.0	chr2	43248165	43248251	(198945278)	+	(AG)n	Simple_repeat	1	87	(0)	1977175
2164	10.5	0.0	0.7	chr2	43248252	43248528	(198945001)	C	AluSx	SINE/Alu	(34)	278	4	1977176
2247	6.2	0.0	0.0	chr2	43746725	43746981	(198446548)	+	AluY	SINE/Alu	37	293	(18)	1978005
44	7.6	0.0	0.0	chr2	43747079	43747134	(198446395)	+	(TC)n	Simple_repeat	1	56	(0)	1978006
380	38.1	6.8	8.5	chr2	43747139	43747528	(198446001)	C	L2b	LINE/L2	(20)	3355	2973	1978007
33	21.8	1.4	0.0	chr2	44503938	44504008	(197689521)	+	GA-rich	Low_complexity	1	72	(0)	1979314
1039	15.6	4.3	1.1	chr2	44504019	44504200	(197689329)	C	MLT1A	LTR/ERVL-MaLR	(186)	188	1	1979313
51	10.1	1.3	0.0	chr2	44915806	44915897	(197277632)	+	(GA)n	Simple_repeat	1	93	(0)	1979953
13	17.9	0.0	9.4	chr2	45009295	45009347	(197184182)	+	(AAGCCC)n	Simple_repeat	1	53	(0)	1980087
17	25.1	5.1	2.4	chr2	45009363	45009441	(197184088)	+	(CGCT)n	Simple_repeat	1	83	(0)	1980088
56	54.2	0.0	0.0	chr2	45154614	45155015	(197038514)	+	(TTTT)n	Simple_repeat	1	402	(0)	1980313
81	0.0	0.0	0.0	chr2	45297823	45297891	(196895638)	+	(GA)n	Simple_repeat	1	69	(0)	1980513
33	5.6	0.0	0.0	chr2	45651060	45651096	(196542433)	+	(CA)n	Simple_repeat	1	37	(0)	1981029
22	16.0	8.8	2.3	chr2	45651173	45651252	(196542277)	+	(GGCGAGC)n	Simple_repeat	1	87	(0)	1981030
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
18	14.2	10.6	0.0	chr2	47906280	47906326	(194287203)	+	(TC)n	Simple_repeat	1	52	(0)	1985046
40	2.4	2.4	0.0	chr2	48515217	48515258	(193678271)	+	(TC)n	Simple_repeat	1	43	(0)	1986110
816	28.6	1.2	1.2	chr2	48732950	48733193	(193460336)	+	UCON29	DNA/PiggyBac?	20	263	(176)	1986469
1900	21.4	11.9	6.7	chr2	53594358	53594545	(188598984)	+	MLT1F1	LTR/ERVL-MaLR	1	176	(393)	1992824
60	0.0	1.8	0.0	chr2	53594546	53594600	(188598929)	+	(TC)n	Simple_repeat	1	56	(0)	1992825
1900	21.4	11.9	6.7	chr2	53594601	53594948	(188598581)	+	MLT1F1	LTR/ERVL-MaLR	177	568	(1)	1992824
2161	14.2	0.0	0.7	chr2	54522348	54522646	(187670883)	+	AluSx	SINE/Alu	1	298	(14)	1994506
54	1.9	1.9	0.0	chr2	54522647	54522700	(187670829)	+	(AG)n	Simple_repeat	1	55	(0)	1994507
19	0.0	0.0	0.0	chr2	54522712	54522735	(187670794)	+	(GAAA)n	Simple_repeat	1	24	(0)	1994508
209	32.7	6.1	6.1	chr2	54823720	54823833	(187369696)	+	MIRb	SINE/MIR	19	132	(136)	1994896
48	4.1	0.0	0.0	chr2	54823851	54823900	(187369629)	+	(TC)n	Simple_repeat	1	50	(0)	1994897
203	27.3	11.5	0.0	chr2	54823992	54824068	(187369461)	C	MIRc	SINE/MIR	(166)	102	16	1994898
24	15.9	2.3	0.0	chr2	55368437	55368480	(186825049)	+	(TC)n	Simple_repeat	1	45	(0)	1995772
831	18.4	0.0	0.0	chr2	55368499	55368623	(186824906)	C	AluJr	SINE/Alu	(187)	125	1	1995773
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
24	11.1	2.6	0.0	chr2	57516828	57516866	(184676663)	+	(GA)n	Simple_repeat	1	40	(0)	1998682
2284	10.1	0.0	0.0	chr2	57729265	57729542	(184463987)	+	AluSx	SINE/Alu	1	278	(34)	1998926
59	1.8	0.0	0.0	chr2	57729543	57729597	(184463932)	+	(TC)n	Simple_repeat	1	55	(0)	1998927
25	20.8	3.1	1.5	chr2	57759889	57759952	(184433577)	+	GA-rich	Low_complexity	1	66	(0)	1998955
55	25.7	0.0	1.4	chr2	58460834	58460981	(183732548)	+	(TCTCGC)n	Simple_repeat	1	148	(0)	1999812
30	7.9	0.0	0.0	chr2	58997232	58997271	(183196258)	+	(GA)n	Simple_repeat	1	40	(0)	2000539
51	29.7	4.1	0.5	chr2	59080889	59081082	(183112447)	+	GA-rich	Low_complexity	1	202	(0)	2000642
57	1.9	0.0	0.0	chr2	59185119	59185171	(183008358)	+	(GA)n	Simple_repeat	1	53	(0)	2000783
76	0.0	0.0	0.0	chr2	59267310	59267374	(182926155)	+	(TC)n	Simple_repeat	1	65	(0)	2000899
31	3.3	0.0	0.0	chr2	60454033	60454063	(181739466)	+	(AG)n	Simple_repeat	1	31	(0)	2002476
27	0.0	0.0	0.0	chr2	60553483	60553511	(181640018)	+	(A)n	Simple_repeat	1	29	(0)	2002583
35	6.6	2.1	0.0	chr2	60553511	60553558	(181639971)	+	(AG)n	Simple_repeat	1	49	(0)	2002584
481	22.5	6.5	0.8	chr2	60559888	60560017	(181633512)	+	MER131	DNA?	24	161	(54)	2002595
57	8.2	3.3	0.0	chr2	60560050	60560140	(181633389)	+	(TC)n	Simple_repeat	1	94	(0)	2002596
2144	12.4	0.7	0.0	chr2	61540154	61540460	(180653069)	+	AluSx1	SINE/Alu	1	309	(3)	2004527
466	11.2	0.0	15.2	chr2	61540461	61540497	(180653032)	C	MER6A	DNA/TcMar-Tigger	(57)	548	517	2004526
1890	11.4	0.4	3.9	chr2	61540498	61540777	(180652752)	+	AluJb	SINE/Alu	21	290	(22)	2004528
455	19.5	3.9	2.0	chr2	61955126	61955206	(180238323)	C	L1ME1	LINE/L1	(769)	5410	5326	2005540
429	17.9	0.5	0.1	chr2	61955208	61955292	(180238237)	+	FLAM_C	SINE/Alu	2	75	(58)	2005548
42	4.6	0.0	0.0	chr2	61955302	61955346	(180238183)	+	(CT)n	Simple_repeat	1	45	(0)	2005549
345	21.2	0.0	8.2	chr2	61955351	61955435	(180238094)	C	AluJo	SINE/Alu	(115)	197	120	2005550
573	24.0	1.0	1.5	chr2	61955445	61955639	(180237890)	C	L1ME1	LINE/L1	(966)	5180	4987	2005540
627	20.2	3.0	1.6	chr2	62138924	62139052	(180054477)	+	FLAM_A	SINE/Alu	1	131	(11)	2005906
37	2.1	1.9	3.7	chr2	62139054	62139106	(180054423)	+	(GA)n	Simple_repeat	1	54	(0)	2005907
15	23.4	6.9	1.6	chr2	62412128	62412185	(179781344)	+	GA-rich	Low_complexity	1	62	(0)	2006479
108	9.8	0.0	0.0	chr2	62412298	62412452	(179781077)	+	(TC)n	Simple_repeat	1	155	(0)	2006480
83	3.2	3.2	0.0	chr2	62664077	62664171	(179529358)	+	(TC)n	Simple_repeat	1	98	(0)	2006824
84	10.4	0.0	1.5	chr2	62665172	62665303	(179528226)	+	(AAAG)n	Simple_repeat	1	132	(0)	2006826
2281	13.3	2.5	1.0	chr2	62730223	62730608	(179462921)	C	L1MC2	LINE/L1	(258)	6504	6113	2006930
256	16.9	8.1	0.6	chr2	62730625	62730785	(179462744)	+	HERVIP10FH-int	LTR/ERV1	844	1017	(4085)	2006931
53	22.5	4.1	2.2	chr2	62730786	62730957	(179462572)	+	(AGAC)n	Simple_repeat	1	179	(0)	2006932
57	0.0	0.0	0.0	chr2	63043921	63043971	(179149558)	+	(T)n	Simple_repeat	1	51	(0)	2007372
24	35.5	0.0	1.1	chr2	63048943	63049032	(179144497)	+	(TC)n	Simple_repeat	1	90	(0)	2007374
11	14.1	0.0	8.1	chr2	63050325	63050361	(179143168)	+	G-rich	Low_complexity	1	37	(0)	2007375
36	0.0	0.0	0.0	chr2	64025690	64025729	(178167800)	+	(TA)n	Simple_repeat	1	40	(0)	2008697
68	6.0	0.0	0.0	chr2	64025729	64025815	(178167714)	+	(AG)n	Simple_repeat	1	87	(0)	2008698
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
59	1.9	0.0	0.0	chr2	64700626	64700680	(177492849)	+	(TC)n	Simple_repeat	1	55	(0)	2009790
2312	10.9	0.3	0.6	chr2	64700681	64700985	(177492544)	C	AluSx1	SINE/Alu	(7)	305	1	2009791
284	23.2	0.0	0.0	chr2	65057598	65057653	(177135876)	+	L2a	LINE/L2	3350	3405	(21)	2010493
804	8.8	0.0	3.5	chr2	65057825	65057938	(177135591)	C	FLAM_C	SINE/Alu	(16)	127	18	2010494
2279	11.0	0.0	2.2	chr2	65214038	65214354	(176979175)	C	AluSq	SINE/Alu	(3)	310	1	2010839
825	24.9	8.2	8.8	chr2	65214355	65214445	(176979084)	C	HAL1	LINE/L1	(485)	2022	1926	2010837
31	3.3	0.0	0.0	chr2	65214459	65214489	(176979040)	+	(GA)n	Simple_repeat	1	31	(0)	2010840
375	29.5	8.3	1.8	chr2	65214503	65214671	(176978858)	C	HAL1	LINE/L1	(678)	1829	1649	2010837
609	14.5	0.0	11.3	chr2	65222775	65222898	(176970631)	+	AluJr	SINE/Alu	1	110	(202)	2010863
34	5.6	0.0	0.0	chr2	65222901	65222938	(176970591)	+	(TC)n	Simple_repeat	1	38	(0)	2010864
58	1.9	0.0	0.0	chr2	65302104	65302157	(176891372)	+	(AG)n	Simple_repeat	1	54	(0)	2011014
2013	13.8	0.0	0.7	chr2	65321784	65322074	(176871455)	C	AluSx	SINE/Alu	(23)	289	1	2011055
673	29.3	8.3	2.8	chr2	65322078	65322229	(176871300)	C	L1M5	LINE/L1	(1777)	4369	4209	2011056
49	0.0	0.0	0.0	chr2	65322230	65322271	(176871258)	+	(CT)n	Simple_repeat	1	42	(0)	2011057
673	29.3	8.3	2.8	chr2	65322272	65322294	(176871235)	C	L1M5	LINE/L1	(1938)	4208	4189	2011056
2428	8.7	0.0	0.0	chr2	65322295	65322592	(176870937)	C	AluY	SINE/Alu	(13)	298	1	2011058
957	16.2	1.2	2.3	chr2	65410091	65410263	(176783266)	+	AluJo	SINE/Alu	137	307	(5)	2011193
21	7.6	0.0	0.0	chr2	65410317	65410344	(176783185)	+	(TC)n	Simple_repeat	1	28	(0)	2011194
60	1.8	0.0	0.0	chr2	65814753	65814808	(176378721)	+	(GA)n	Simple_repeat	1	56	(0)	2011946
61	17.4	0.0	0.0	chr2	65835481	65835592	(176357937)	+	GA-rich	Low_complexity	1	112	(0)	2011983
30	9.6	2.2	0.0	chr2	66435286	66435331	(175758198)	+	(AG)n	Simple_repeat	1	47	(0)	2012779
36	0.0	0.0	2.9	chr2	66555255	66555289	(175638240)	+	(TC)n	Simple_repeat	1	35	(0)	2012896
2130	13.2	2.9	0.0	chr2	66558860	66559123	(175634406)	+	AluSx1	SINE/Alu	1	264	(48)	2012904
34	0.0	0.0	0.0	chr2	66559124	66559152	(175634377)	+	(AG)n	Simple_repeat	1	29	(0)	2012905
2130	13.2	2.9	0.0	chr2	66559153	66559190	(175634339)	+	AluSx1	SINE/Alu	274	311	(1)	2012904
596	20.0	3.0	0.0	chr2	66559287	66559416	(175634113)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	2012906
24	16.8	0.0	0.0	chr2	66572001	66572042	(175621487)	+	(CT)n	Simple_repeat	1	42	(0)	2012922
18	28.0	3.2	3.1	chr2	66573946	66573984	(175619545)	+	G-rich	Low_complexity	1	67	(33)	2012923
26	12.4	2.3	0.0	chr2	66573985	66574028	(175619501)	+	(GA)n	Simple_repeat	1	45	(0)	2012924
18	28.0	3.2	3.1	chr2	66574029	66574045	(175619484)	+	G-rich	Low_complexity	68	100	(0)	2012923
33	24.8	6.1	0.8	chr2	66575335	66575449	(175618080)	+	(TC)n	Simple_repeat	1	122	(0)	2012928
17	8.8	0.0	0.0	chr2	66581101	66581124	(175612405)	+	(AC)n	Simple_repeat	1	24	(0)	2012931
33	0.0	3.1	0.0	chr2	66581220	66581251	(175612278)	+	(CT)n	Simple_repeat	1	33	(0)	2012932
22	0.0	0.0	0.0	chr2	66581252	66581275	(175612254)	+	(AC)n	Simple_repeat	1	24	(0)	2012933
12	13.3	5.7	2.7	chr2	66581344	66581378	(175612151)	+	(TTG)n	Simple_repeat	1	37	(0)	2012934
451	27.3	2.1	1.4	chr2	66913264	66913404	(175280125)	C	L2	LINE/L2	(609)	2810	2669	2013370
31	3.3	0.0	0.0	chr2	66913432	66913462	(175280067)	+	(TC)n	Simple_repeat	1	31	(0)	2013371
1061	28.7	7.7	3.4	chr2	66913463	66914011	(175279518)	+	Kanga1d	DNA/TcMar-Tc2	32	607	(2)	2013372
1953	10.3	10.8	0.9	chr2	67139460	67139621	(175053908)	C	THE1D	LTR/ERVL-MaLR	(0)	381	201	2013677
43	4.5	0.0	0.0	chr2	67139622	67139667	(175053862)	+	(GA)n	Simple_repeat	1	46	(0)	2013678
1953	10.3	10.8	0.9	chr2	67139668	67139847	(175053682)	C	THE1D	LTR/ERVL-MaLR	(181)	200	2	2013677
338	23.9	0.0	0.0	chr2	67436115	67436181	(174757348)	+	MLT1F	LTR/ERVL-MaLR	1	67	(481)	2014089
23	23.8	1.8	0.0	chr2	67436186	67436240	(174757289)	+	(TC)n	Simple_repeat	1	56	(0)	2014090
905	21.9	10.2	0.0	chr2	67436280	67436507	(174757022)	+	MLT1F	LTR/ERVL-MaLR	169	422	(126)	2014089
44	30.2	2.5	3.9	chr2	67844242	67844443	(174349086)	+	(CTCC)n	Simple_repeat	1	207	(0)	2014631
32	7.8	0.0	0.0	chr2	68253597	68253637	(173939892)	+	(GT)n	Simple_repeat	1	41	(0)	2015307
584	31.4	0.6	0.0	chr2	68855266	68855434	(173338095)	+	MLT1F1	LTR/ERVL-MaLR	1	170	(399)	2016178
41	0.0	0.0	0.0	chr2	68855442	68855476	(173338053)	+	(TC)n	Simple_repeat	1	35	(0)	2016179
1916	25.0	7.1	4.8	chr2	68998464	68998656	(173194873)	C	HAL1	LINE/L1	(548)	1959	1773	2016362
2139	14.8	3.4	8.5	chr2	68998657	68998712	(173194817)	C	MLT2D	LTR/ERVL	(0)	414	367	2016364
57	5.0	0.0	0.0	chr2	68998713	68998774	(173194755)	+	(AG)n	Simple_repeat	1	62	(0)	2016365
228	27.6	11.2	5.2	chr2	69779296	69779429	(172414100)	+	L2a	LINE/L2	3284	3426	(0)	2017741
7772	6.7	0.0	6.2	chr2	70976795	70977868	(171215661)	C	LTR13	LTR/ERVK	(0)	1007	1	2019924
542	34.6	11.1	2.7	chr2	72752525	72752537	(169440992)	+	L2b	LINE/L2	1816	1826	(1593)	2022495
34	3.0	0.0	0.0	chr2	72752538	72752571	(169440958)	+	(TC)n	Simple_repeat	1	34	(0)	2022496
542	34.6	11.1	2.7	chr2	72752572	72753123	(169440406)	+	L2b	LINE/L2	1827	2465	(954)	2022495
368	32.9	7.7	0.0	chr2	73276498	73276560	(168916969)	+	L1M5	LINE/L1	3190	3252	(2894)	2023435
63	4.7	0.0	0.0	chr2	73276561	73276627	(168916902)	+	(AG)n	Simple_repeat	1	67	(0)	2023436
368	32.9	7.7	0.0	chr2	73276628	73276837	(168916692)	+	L1M5	LINE/L1	3253	3485	(2661)	2023435
60	0.0	0.0	0.0	chr2	73365776	73365826	(168827703)	+	(AG)n	Simple_repeat	1	51	(0)	2023602
1723	11.6	13.0	0.4	chr2	73365828	73366069	(168827460)	C	AluSx1	SINE/Alu	(35)	277	1	2023603
67	9.3	2.9	0.0	chr2	74290588	74290690	(167902839)	+	(GA)n	Simple_repeat	1	106	(0)	2025148
2260	12.3	0.7	0.0	chr2	74465702	74466011	(167727518)	+	AluSq2	SINE/Alu	1	312	(1)	2025438
28	15.5	0.0	0.0	chr2	74466012	74466062	(167727467)	+	GA-rich	Low_complexity	1	51	(0)	2025439
49	2.2	0.0	0.0	chr2	75355923	75355968	(166837561)	+	(GA)n	Simple_repeat	1	46	(0)	2026854
2831	19.8	3.8	0.0	chr2	75355969	75356181	(166837348)	C	MLT2B3	LTR/ERVL	(322)	232	3	2026852
42	0.0	0.0	0.0	chr2	75555302	75555337	(166638192)	+	(TC)n	Simple_repeat	1	36	(0)	2027148
31	13.8	0.0	0.0	chr2	75565965	75566013	(166627516)	+	(CT)n	Simple_repeat	1	49	(0)	2027166
76	13.7	1.5	1.5	chr2	77479679	77479813	(164713716)	+	(TC)n	Simple_repeat	1	137	(0)	2029722
191	33.9	9.6	3.0	chr2	77479930	77480163	(164713366)	C	MIRc	SINE/MIR	(16)	252	2	2029723
689	26.5	7.5	1.0	chr2	77684102	77684299	(164509230)	+	MLT1F2	LTR/ERVL-MaLR	1	212	(348)	2029965
2120	18.5	0.8	4.8	chr2	77684418	77684831	(164508698)	+	MER54A	LTR/ERVL	3	399	(502)	2029966
33	0.0	0.0	0.0	chr2	77684834	77684861	(164508668)	+	(TC)n	Simple_repeat	1	28	(0)	2029967
68	0.0	0.0	0.0	chr2	79384377	79384434	(162809095)	+	(TC)n	Simple_repeat	1	58	(0)	2032221
1219	24.5	6.4	3.5	chr2	83126200	83126331	(159067198)	+	MLT1F1	LTR/ERVL-MaLR	1	131	(438)	2037223
75	2.7	1.3	0.0	chr2	83126332	83126407	(159067122)	+	(GA)n	Simple_repeat	1	77	(0)	2037227
1219	25.6	9.2	3.3	chr2	83126408	83126771	(159066758)	+	MLT1F1	LTR/ERVL-MaLR	130	548	(12)	2037223
1267	23.4	4.0	4.3	chr2	83399452	83399632	(158793897)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	202	2037624
57	3.0	4.4	0.0	chr2	83399633	83399700	(158793829)	+	(TC)n	Simple_repeat	1	71	(0)	2037625
1267	23.4	4.0	4.3	chr2	83399701	83399893	(158793636)	C	MLT1B	LTR/ERVL-MaLR	(189)	201	1	2037624
201	24.7	4.3	11.9	chr2	84925970	84926070	(157267459)	C	MER91C	DNA/hAT-Tip100	(31)	109	17	2039689
2344	10.3	2.3	1.0	chr2	85024195	85024495	(157169034)	+	AluSx1	SINE/Alu	1	305	(7)	2039954
1266	28.8	6.9	9.2	chr2	85024496	85024547	(157168982)	C	L1ME3E	LINE/L1	(972)	5174	5120	2039951
38	2.8	0.0	0.0	chr2	85024548	85024584	(157168945)	+	(GA)n	Simple_repeat	1	37	(0)	2039955
1266	28.8	6.9	9.2	chr2	85024585	85025342	(157168187)	C	L1ME3E	LINE/L1	(1027)	5119	4381	2039951
1044	12.0	0.7	0.0	chr2	85140734	85140875	(157052654)	+	AluSq2	SINE/Alu	155	297	(16)	2040190
24	12.4	4.5	0.0	chr2	85140892	85140935	(157052594)	+	GA-rich	Low_complexity	1	46	(0)	2040191
1102	18.1	17.4	1.2	chr2	85141005	85141253	(157052276)	+	AluJr4	SINE/Alu	2	299	(13)	2040192
24	17.2	2.2	0.0	chr2	85170598	85170643	(157022886)	+	(TC)n	Simple_repeat	1	47	(0)	2040246
256	30.1	5.6	9.5	chr2	85732710	85732878	(156460651)	C	L2b	LINE/L2	(162)	3213	3052	2041398
37	0.0	0.0	0.0	chr2	85732939	85732970	(156460559)	+	(GA)n	Simple_repeat	1	32	(0)	2041399
6201	12.3	1.1	5.5	chr2	86374858	86375337	(155818192)	C	L1MA5	LINE/L1	(0)	7719	7241	2042569
60	3.5	0.0	0.0	chr2	86375338	86375397	(155818132)	+	(TC)n	Simple_repeat	1	60	(0)	2042570
1522	15.9	1.4	7.1	chr2	86375398	86375692	(155817837)	C	AluJb	SINE/Alu	(34)	278	1	2042571
1926	14.8	0.3	6.0	chr2	86401141	86401427	(155792102)	C	MER47A	DNA/TcMar-Tigger	(76)	290	7	2042604
53	6.6	0.0	0.0	chr2	86401430	86401492	(155792037)	+	(TC)n	Simple_repeat	1	63	(0)	2042606
2065	21.9	7.3	0.9	chr2	86401494	86401976	(155791553)	C	MLT2B3	LTR/ERVL	(45)	507	1	2042603
2013	18.7	1.4	4.8	chr2	87105557	87105972	(155087557)	+	MER54A	LTR/ERVL	3	401	(500)	2043771
86	0.0	1.3	0.0	chr2	87105973	87106049	(155087480)	+	(TC)n	Simple_repeat	1	78	(0)	2043772
2013	18.7	1.4	4.8	chr2	87106050	87106070	(155087459)	+	MER54A	LTR/ERVL	402	425	(476)	2043771
1494	19.3	3.3	2.7	chr2	87645212	87645512	(154548017)	+	AluJr	SINE/Alu	2	304	(8)	2044517
1080	24.6	2.9	14.2	chr2	87645513	87645534	(154547995)	+	MLT1C	LTR/ERVL-MaLR	183	187	(280)	2044516
65	1.6	1.6	0.0	chr2	87645535	87645597	(154547932)	+	(TC)n	Simple_repeat	1	64	(0)	2044518
1080	24.6	2.9	14.2	chr2	87645598	87645905	(154547624)	+	MLT1C	LTR/ERVL-MaLR	188	464	(3)	2044516
377	27.9	9.8	1.3	chr2	88180856	88180982	(154012547)	+	MIRb	SINE/MIR	11	150	(118)	2045422
19	4.3	0.0	0.0	chr2	88181574	88181597	(154011932)	+	(TG)n	Simple_repeat	1	24	(0)	2045423
4770	12.6	6.3	4.6	chr2	88181598	88182675	(154010854)	C	L1MB7	LINE/L1	(9)	6175	5082	2045424
299	32.1	7.5	1.2	chr2	88201054	88201214	(153992315)	C	LTR16A	LTR/ERVL	(248)	203	32	2045468
370	7.8	9.0	0.0	chr2	88201224	88201899	(153991630)	+	GA-rich	Low_complexity	1	737	(0)	2045469
102	18.4	2.8	3.1	chr2	95046804	95047057	(147146472)	+	GA-rich	Low_complexity	1	253	(0)	2050108
377	21.4	10.7	2.5	chr2	95047091	95047210	(147146319)	C	Charlie18a	DNA/hAT-Charlie	(82)	260	130	2050109
2451	13.9	4.5	6.8	chr2	96409270	96409596	(145783933)	+	LTR35A	LTR/ERV1	138	443	(104)	2052097
297	18.1	2.7	5.2	chr2	96409606	96409797	(145783732)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	825	2052099
853	11.7	0.8	0.8	chr2	96409798	96409926	(145783603)	+	LTR35A	LTR/ERV1	417	545	(2)	2052097
60	13.4	4.3	0.8	chr2	98129260	98129375	(144064154)	+	GA-rich	Low_complexity	1	121	(0)	2054584
692	17.9	4.4	12.6	chr2	98129376	98129573	(144063956)	C	MLT1A	LTR/ERVL-MaLR	(191)	183	3	2054582
2325	12.6	0.3	1.0	chr2	98715034	98715343	(143478186)	+	AluSx	SINE/Alu	1	308	(4)	2055376
6816	21.0	7.9	4.0	chr2	98715344	98715460	(143478069)	+	L1MC4a	LINE/L1	7072	7185	(697)	2055373
2554	7.6	4.2	0.3	chr2	98715461	98715801	(143477728)	+	L1PA13	LINE/L1	5806	6160	(3)	2055377
1834	13.8	3.0	2.0	chr2	98733557	98733834	(143459695)	+	AluJo	SINE/Alu	2	278	(34)	2055404
54	0.0	0.0	0.0	chr2	98733835	98733880	(143459649)	+	(TC)n	Simple_repeat	1	46	(0)	2055405
1834	13.8	3.0	2.0	chr2	98733881	98733899	(143459630)	+	AluJo	SINE/Alu	283	301	(11)	2055404
2250	10.2	0.7	0.3	chr2	98733900	98734194	(143459335)	+	AluSq2	SINE/Alu	2	297	(16)	2055406
16	16.6	0.0	0.0	chr2	99336696	99336722	(142856807)	+	(T)n	Simple_repeat	1	27	(0)	2056309
328	23.8	0.9	0.9	chr2	99336753	99336858	(142856671)	C	L1ME3	LINE/L1	(50)	6112	6007	2056310
374	31.5	3.5	1.8	chr2	99451512	99451624	(142741905)	+	MIRb	SINE/MIR	23	137	(131)	2056465
34	3.0	0.0	0.0	chr2	99882056	99882089	(142311440)	+	(TC)n	Simple_repeat	1	34	(0)	2057106
226	33.3	5.0	1.0	chr2	99974294	99974390	(142219139)	+	L3	LINE/CR1	578	678	(3421)	2057221
300	36.2	2.0	0.0	chr2	100005130	100005278	(142188251)	+	Charlie19a	DNA/hAT-Charlie	35	186	(200)	2057265
2174	8.2	3.6	0.7	chr2	100562348	100562641	(141630888)	C	AluSx1	SINE/Alu	(9)	303	1	2058109
27	0.0	3.1	0.0	chr2	101729070	101729101	(140464428)	+	(AG)n	Simple_repeat	1	33	(0)	2060140
35	0.0	0.0	0.0	chr2	101729102	101729131	(140464398)	+	(GT)n	Simple_repeat	1	30	(0)	2060141
47	2.3	0.0	0.0	chr2	101965172	101965216	(140228313)	+	(AG)n	Simple_repeat	1	45	(0)	2060421
362	23.0	5.4	4.8	chr2	101965299	101965444	(140228085)	+	MER5A	DNA/hAT-Charlie	37	183	(6)	2060422
164	21.2	0.3	0.0	chr2	101992047	101992388	(140201141)	+	GA-rich	Low_complexity	1	343	(0)	2060464
62	0.0	0.0	0.0	chr2	104692516	104692568	(137500961)	+	(AG)n	Simple_repeat	1	53	(0)	2063856
1592	19.0	7.0	3.9	chr2	104763280	104763455	(137430074)	+	MLT1A	LTR/ERVL-MaLR	1	169	(205)	2063939
76	5.0	0.0	0.0	chr2	104763456	104763538	(137429991)	+	(TC)n	Simple_repeat	1	83	(0)	2063940
1592	19.0	7.0	3.9	chr2	104763539	104763723	(137429806)	+	MLT1A	LTR/ERVL-MaLR	170	373	(1)	2063939
29	19.3	4.4	3.2	chr2	104839185	104839275	(137354254)	+	A-rich	Low_complexity	1	95	(0)	2064050
33	31.6	1.5	0.8	chr2	104854134	104854263	(137339266)	+	GA-rich	Low_complexity	1	132	(0)	2064065
1505	18.9	1.8	4.2	chr2	104881177	104881461	(137312068)	C	AluJr	SINE/Alu	(30)	282	5	2064096
36	16.7	1.5	0.0	chr2	104881510	104881576	(137311953)	+	(CT)n	Simple_repeat	1	68	(0)	2064097
1917	14.4	13.2	1.1	chr2	105202210	105202389	(136991140)	C	MSTA	LTR/ERVL-MaLR	(4)	424	218	2064563
40	2.6	0.0	0.0	chr2	105202390	105202428	(136991101)	+	(GA)n	Simple_repeat	1	39	(0)	2064564
1917	14.4	13.2	1.1	chr2	105202429	105202619	(136990910)	C	MSTA	LTR/ERVL-MaLR	(211)	217	2	2064563
12	25.6	3.4	3.3	chr2	105842460	105842518	(136351011)	+	(AATATA)n	Simple_repeat	1	61	(0)	2065561
9576	7.6	1.2	11.7	chr2	108524358	108525937	(133667592)	+	Harlequin-int	LTR/ERV1	1	1412	(5484)	2069386
32	5.3	0.0	0.0	chr2	109127280	109127319	(133066210)	+	(GA)n	Simple_repeat	1	40	(0)	2070329
525	21.6	7.9	0.8	chr2	109127328	109127444	(133066085)	C	L2a	LINE/L2	(1)	3425	3300	2070330
1846	15.4	6.3	3.1	chr2	109458529	109458567	(132734962)	C	MLT2C1	LTR/ERVL	(0)	397	359	2070714
34	3.0	0.0	0.0	chr2	109458568	109458601	(132734928)	+	(GA)n	Simple_repeat	1	34	(0)	2070715
1846	15.4	6.3	3.1	chr2	109458602	109458944	(132734585)	C	MLT2C1	LTR/ERVL	(39)	358	3	2070714
35	17.3	1.5	0.0	chr2	110744111	110744176	(131449353)	+	GA-rich	Low_complexity	1	67	(0)	2072648
12	4.5	4.0	3.9	chr2	111120579	111120603	(131072926)	+	(GCC)n	Simple_repeat	1	26	(0)	2073127
29	2.4	7.1	0.0	chr2	111702128	111702169	(130491360)	+	(GA)n	Simple_repeat	1	45	(0)	2073897
1500	28.2	3.6	7.7	chr2	112132466	112133022	(130060507)	+	MER74A	LTR/ERVL	14	546	(12)	2074592
7557	6.9	4.8	1.9	chr2	112351998	112352407	(129841122)	C	Harlequin-int	LTR/ERV1	(5477)	1419	985	2074932
38	4.3	2.0	2.0	chr2	112352408	112352457	(129841072)	+	(TC)n	Simple_repeat	1	51	(0)	2074935
7557	6.9	4.8	1.9	chr2	112352458	112353168	(129840361)	C	Harlequin-int	LTR/ERV1	(5912)	984	263	2074932
367	27.7	10.5	0.0	chr2	113330358	113330494	(128863035)	+	Charlie1	DNA/hAT-Charlie	1	153	(2628)	2076627
576	14.6	1.0	0.0	chr2	113330500	113330595	(128862934)	+	Charlie1a	DNA/hAT-Charlie	775	871	(584)	2076628
32	2.6	5.1	0.0	chr2	113330597	113330635	(128862894)	+	(CT)n	Simple_repeat	1	41	(0)	2076629
66	8.9	0.0	2.0	chr2	113582509	113582607	(128610922)	+	(AG)n	Simple_repeat	1	99	(0)	2077013
764	18.1	4.3	0.0	chr2	113582614	113582768	(128610761)	C	MLT1A	LTR/ERVL-MaLR	(212)	162	1	2077012
20	22.4	1.3	5.3	chr2	118185529	118185603	(124007926)	+	G-rich	Low_complexity	1	76	(0)	2083311
15	0.0	0.0	0.0	chr2	118222268	118222284	(123971245)	+	(AG)n	Simple_repeat	1	17	(0)	2083374
1836	21.4	10.3	1.2	chr2	118772783	118772953	(123420576)	+	MLT1F2	LTR/ERVL-MaLR	2	186	(374)	2084226
50	5.7	0.0	0.0	chr2	118772954	118773009	(123420520)	+	(TC)n	Simple_repeat	1	56	(0)	2084227
1836	21.4	10.3	1.2	chr2	118773010	118773330	(123420199)	+	MLT1F2	LTR/ERVL-MaLR	187	544	(16)	2084226
240	35.7	11.9	4.3	chr2	119027962	119028540	(123164989)	C	L3	LINE/CR1	(934)	3165	2537	2084586
1419	19.9	0.3	5.5	chr2	119040729	119040873	(123152656)	+	AluJr4	SINE/Alu	1	131	(181)	2084604
50	5.3	0.0	0.0	chr2	119040874	119040932	(123152597)	+	(GTTC)n	Simple_repeat	1	59	(0)	2084605
1419	19.9	0.3	5.5	chr2	119040933	119041093	(123152436)	+	AluJr4	SINE/Alu	132	291	(21)	2084604
1934	15.7	2.8	0.0	chr2	119363744	119364024	(122829505)	+	AluJb	SINE/Alu	1	289	(23)	2085204
66	14.2	3.2	0.8	chr2	119364026	119364151	(122829378)	+	GA-rich	Low_complexity	1	130	(0)	2085205
14	8.2	3.9	0.0	chr2	119364223	119364248	(122829281)	+	(AAAT)n	Simple_repeat	1	27	(0)	2085206
548	31.6	9.9	4.7	chr2	120875668	120876059	(121317470)	+	L1ME4a	LINE/L1	4573	4992	(1154)	2087692
74	2.8	0.0	0.0	chr2	121292006	121292077	(120901452)	+	(CT)n	Simple_repeat	1	72	(0)	2088442
100	34.2	1.4	3.5	chr2	121582185	121582665	(120610864)	+	GA-rich	Low_complexity	20	489	(0)	2088911
25	3.5	0.0	0.0	chr2	121649464	121649493	(120544036)	+	(A)n	Simple_repeat	1	30	(0)	2089035
102	1.0	2.0	0.0	chr2	123682614	123682711	(118510818)	+	(TC)n	Simple_repeat	1	100	(0)	2092094
6749	10.4	3.3	5.3	chr2	123682712	123683589	(118509940)	+	HERVS71-int	LTR/ERV1	502	1412	(7566)	2092093
19	15.3	3.0	7.2	chr2	127050192	127050258	(115143271)	+	G-rich	Low_complexity	1	69	(0)	2096811
24	6.6	0.0	0.0	chr2	127226576	127226607	(114966922)	+	(TC)n	Simple_repeat	1	32	(0)	2097082
60	3.2	0.0	1.5	chr2	127958621	127958685	(114234844)	+	(GA)n	Simple_repeat	1	65	(0)	2098348
1436	20.4	4.4	0.0	chr2	127958689	127958948	(114234581)	C	AluJb	SINE/Alu	(39)	273	2	2098349
54	3.7	0.0	0.0	chr2	130135055	130135109	(112058420)	+	(CT)n	Simple_repeat	1	55	(0)	2101392
18	13.7	0.0	0.0	chr2	130135110	130135136	(112058393)	+	(AC)n	Simple_repeat	2	28	(0)	2101393
43	0.0	0.0	0.0	chr2	131737588	131737624	(110455905)	+	(AC)n	Simple_repeat	1	37	(0)	2103668
44	2.4	0.0	0.0	chr2	131737630	131737671	(110455858)	+	(AG)n	Simple_repeat	1	42	(0)	2103669
14	14.6	0.0	3.1	chr2	131737721	131737752	(110455777)	+	(TAA)n	Simple_repeat	1	32	(0)	2103670
488	24.7	0.5	0.1	chr2	132266341	132267504	(109926025)	+	GA-rich	Low_complexity	1	1169	(0)	2104306
520	18.1	0.0	7.2	chr2	132269223	132269347	(109924182)	C	MER39B	LTR/ERV1	(242)	411	296	2104311
340	25.4	1.7	8.5	chr2	132269238	132269366	(109924163)	C	MER21A	LTR/ERVL	(620)	311	192	2104312
251	18.1	7.7	3.1	chr2	132269371	132269593	(109923936)	+	HERVIP10FH-int	LTR/ERV1	784	1017	(4085)	2104313
801	24.1	0.9	0.4	chr2	132269598	132269990	(109923539)	+	GA-rich	Low_complexity	1	395	(0)	2104314
2009	7.0	0.0	0.4	chr2	132269991	132270233	(109923296)	+	AluYi6_4d	SINE/Alu	2	243	(68)	2104315
801	24.1	0.9	0.4	chr2	132270234	132271773	(109921756)	+	GA-rich	Low_complexity	396	1942	(0)	2104316
41	8.5	3.2	0.0	chr2	132794203	132794264	(109399265)	+	(TA)n	Simple_repeat	1	64	(0)	2105070
59	8.5	2.3	0.0	chr2	132794264	132794350	(109399179)	+	(AG)n	Simple_repeat	1	89	(0)	2105071
2203	11.8	0.0	1.0	chr2	132794351	132794647	(109398882)	+	AluSx	SINE/Alu	1	294	(18)	2105072
54	0.0	0.0	0.0	chr2	134845510	134845555	(107347974)	+	(TC)n	Simple_repeat	1	46	(0)	2108020
28	16.7	0.0	0.0	chr2	134918469	134918522	(107275007)	+	(CCCTC)n	Simple_repeat	1	54	(0)	2108147
2031	11.4	1.4	2.4	chr2	134929323	134929612	(107263917)	+	AluJo	SINE/Alu	1	287	(25)	2108162
21	0.0	0.0	0.0	chr2	134929614	134929636	(107263893)	+	(AG)n	Simple_repeat	1	23	(0)	2108163
2277	11.1	0.0	0.3	chr2	134929654	134929950	(107263579)	C	AluSz	SINE/Alu	(16)	296	1	2108164
37	2.9	0.0	0.0	chr2	138550814	138550849	(103642680)	+	(TC)n	Simple_repeat	1	36	(0)	2113590
25	16.2	2.1	0.0	chr2	138779091	138779138	(103414391)	+	GA-rich	Low_complexity	1	49	(0)	2113951
164	9.4	8.0	0.3	chr2	139339639	139339950	(102853579)	+	GA-rich	Low_complexity	1	337	(0)	2114701
34	19.0	4.7	1.1	chr2	142068991	142069076	(100124453)	+	(TC)n	Simple_repeat	1	90	(0)	2118302
59	1.9	0.0	0.0	chr2	142129577	142129631	(100063898)	+	(TC)n	Simple_repeat	1	55	(0)	2118371
22	16.0	0.0	2.2	chr2	142132824	142132854	(100060675)	+	(TG)n	Simple_repeat	1	31	(0)	2118375
30	3.4	0.0	0.0	chr2	142132855	142132884	(100060645)	+	(GA)n	Simple_repeat	1	30	(0)	2118376
22	16.0	0.0	2.2	chr2	142132885	142132897	(100060632)	+	(TG)n	Simple_repeat	2	13	(0)	2118377
879	23.4	13.3	2.3	chr2	142342343	142342503	(99851026)	+	MLT1B	LTR/ERVL-MaLR	1	202	(188)	2118656
42	0.0	0.0	0.0	chr2	142342504	142342539	(99850990)	+	(CT)n	Simple_repeat	1	36	(0)	2118657
879	23.4	13.3	2.3	chr2	142342540	142342683	(99850846)	+	MLT1B	LTR/ERVL-MaLR	203	344	(46)	2118656
21057	12.7	1.9	0.8	chr2	142352910	142353807	(99839722)	+	L1PB1	LINE/L1	2193	3158	(3704)	2118673
69	3.0	0.0	0.0	chr2	142353808	142353875	(99839654)	+	(CT)n	Simple_repeat	1	68	(0)	2118674
200	32.1	0.0	3.6	chr2	142672896	142672979	(99520550)	+	L2a	LINE/L2	2936	3016	(359)	2119097
30	9.6	2.2	0.0	chr2	142673040	142673084	(99520445)	+	(AG)n	Simple_repeat	1	46	(0)	2119098
1437	20.9	7.9	1.2	chr2	142673085	142673414	(99520115)	C	MLT2D	LTR/ERVL	(48)	366	13	2119099
1568	20.8	3.4	3.2	chr2	143845780	143846222	(98347307)	+	Ricksha_c	DNA/MULE-MuDR	355	848	(1200)	2120563
64	5.5	1.3	0.0	chr2	143846223	143846298	(98347231)	+	(TC)n	Simple_repeat	1	77	(0)	2120564
762	24.5	4.7	1.9	chr2	143846299	143846316	(98347213)	+	Ricksha_c	DNA/MULE-MuDR	849	865	(1183)	2120563
40	4.0	2.0	0.0	chr2	143846331	143846381	(98347148)	+	(AG)n	Simple_repeat	1	52	(0)	2120565
369	2.3	0.0	0.0	chr2	143846382	143846425	(98347104)	+	Ricksha_c	DNA/MULE-MuDR	862	905	(1143)	2120566
503	25.1	10.0	3.7	chr2	143846461	143846675	(98346854)	+	L2a	LINE/L2	3196	3425	(1)	2120562
84	26.4	1.4	0.5	chr2	143928251	143928468	(98265061)	+	GA-rich	Low_complexity	1	221	(0)	2120687
250	29.0	10.2	2.8	chr2	143928471	143928651	(98264878)	+	MLT1K	LTR/ERVL-MaLR	400	595	(0)	2120688
1109	26.8	5.9	5.2	chr2	144137192	144137577	(98055952)	C	Tigger15a	DNA/TcMar-Tigger	(135)	580	192	2120985
377	36.3	0.8	0.0	chr2	144137587	144137710	(98055819)	+	MIR3	SINE/MIR	24	148	(60)	2120986
26	17.2	0.0	3.6	chr2	144137713	144137768	(98055761)	+	GA-rich	Low_complexity	1	56	(0)	2120987
225	30.7	10.8	4.9	chr2	144137856	144138081	(98055448)	+	L2	LINE/L2	2002	2242	(1177)	2120988
60	4.8	0.0	0.0	chr2	144369612	144369676	(97823853)	+	(CT)n	Simple_repeat	1	65	(0)	2121337
51	0.0	0.0	0.0	chr2	144441165	144441208	(97752321)	+	(GA)n	Simple_repeat	1	44	(0)	2121423
22	23.6	1.7	0.0	chr2	144445414	144445473	(97748056)	+	(TCTCTC)n	Simple_repeat	1	61	(0)	2121426
44	2.4	0.0	0.0	chr2	144510688	144510729	(97682800)	+	(CT)n	Simple_repeat	1	42	(0)	2121488
23	17.1	5.7	0.0	chr2	144515739	144515791	(97677738)	+	(CA)n	Simple_repeat	1	56	(0)	2121491
21	0.0	0.0	0.0	chr2	144515798	144515820	(97677709)	+	(AG)n	Simple_repeat	1	23	(0)	2121492
33	6.8	2.2	0.0	chr2	144914995	144915040	(97278489)	+	(AG)n	Simple_repeat	1	47	(0)	2121998
34	11.8	0.0	0.0	chr2	144943494	144943548	(97249981)	+	(GAGA)n	Simple_repeat	1	55	(0)	2122032
55	3.7	0.0	0.0	chr2	145815796	145815851	(96377678)	+	(GA)n	Simple_repeat	1	56	(0)	2123143
26	23.9	2.6	1.2	chr2	145815852	145815929	(96377600)	+	GA-rich	Low_complexity	1	80	(0)	2123144
9359	24.1	4.8	7.7	chr2	145993519	145996617	(96196912)	+	L1M4b	LINE/L1	181	3194	(3673)	2123341
75	2.8	0.0	0.0	chr2	147105581	147105653	(95087876)	+	(GA)n	Simple_repeat	1	73	(0)	2124806
253	31.9	4.3	4.3	chr2	147105654	147105668	(95087861)	+	MLT1K	LTR/ERVL-MaLR	413	427	(168)	2124805
33	0.0	0.0	0.0	chr2	147343287	147343314	(94850215)	+	(TG)n	Simple_repeat	1	28	(0)	2125096
43	0.0	0.0	0.0	chr2	147343317	147343353	(94850176)	+	(AG)n	Simple_repeat	1	37	(0)	2125097
1075	30.9	7.0	2.6	chr2	147343354	147343478	(94850051)	C	L1ME3D	LINE/L1	(1175)	4971	4852	2125095
1916	14.8	6.9	0.6	chr2	147597276	147597616	(94595913)	+	MLT1A0	LTR/ERVL-MaLR	1	364	(1)	2125446
33	3.1	0.0	0.0	chr2	147597676	147597708	(94595821)	+	(CT)n	Simple_repeat	1	33	(0)	2125447
16	20.7	0.0	0.0	chr2	147597747	147597785	(94595744)	+	(AGTAGTA)n	Simple_repeat	1	39	(0)	2125448
40	12.2	0.0	1.5	chr2	148102665	148102729	(94090800)	+	(AC)n	Simple_repeat	1	65	(0)	2126130
54	0.0	3.8	0.0	chr2	148102730	148102782	(94090747)	+	(AG)n	Simple_repeat	1	55	(0)	2126131
478	29.7	8.2	3.4	chr2	148623644	148623911	(93569618)	+	LTR33	LTR/ERVL	2	283	(232)	2126896
115	7.6	1.3	0.0	chr2	148623929	148624082	(93569447)	+	(TC)n	Simple_repeat	1	156	(0)	2126897
320	31.0	3.0	3.0	chr2	149039939	149040071	(93153458)	C	MLT1L	LTR/ERVL-MaLR	(68)	527	395	2127515
23	12.4	0.0	0.0	chr2	149040132	149040166	(93153363)	+	(AG)n	Simple_repeat	1	35	(0)	2127516
23	3.7	0.0	0.0	chr2	149040194	149040221	(93153308)	+	(TC)n	Simple_repeat	1	28	(0)	2127517
2291	10.2	0.0	1.3	chr2	149040222	149040525	(93153004)	C	AluSx1	SINE/Alu	(12)	300	1	2127518
243	36.2	8.0	2.1	chr2	149064537	149064677	(93128852)	C	MIR1_Amn	SINE/MIR	(41)	189	40	2127555
146	29.6	1.9	1.8	chr2	149095715	149096248	(93097281)	+	GA-rich	Low_complexity	1	544	(0)	2127594
46	0.0	0.0	0.0	chr2	149175024	149175062	(93018467)	+	(TC)n	Simple_repeat	1	39	(0)	2127722
30	15.5	0.0	3.2	chr2	149175063	149175086	(93018443)	+	(GT)n	Simple_repeat	1	24	(0)	2127723
1766	16.2	4.6	11.5	chr2	150891724	150892072	(91301457)	+	MLT2D	LTR/ERVL	20	353	(61)	2130013
64	1.7	0.0	0.0	chr2	150892073	150892131	(91301398)	+	(TC)n	Simple_repeat	1	59	(0)	2130014
1766	16.2	4.6	11.5	chr2	150892132	150892207	(91301322)	+	MLT2D	LTR/ERVL	354	414	(0)	2130013
2339	7.5	1.3	3.3	chr2	151132153	151132457	(91061072)	+	AluY	SINE/Alu	1	299	(12)	2130370
7852	15.3	4.7	9.4	chr2	151132458	151132855	(91060674)	C	Tigger1	DNA/TcMar-Tigger	(1309)	1109	733	2130366
1080	27.4	17.5	4.2	chr2	151253156	151254277	(90939252)	+	L2a	LINE/L2	2118	3424	(2)	2130559
37	5.0	0.0	0.0	chr2	151254288	151254328	(90939201)	+	(TC)n	Simple_repeat	1	41	(0)	2130560
2210	8.7	0.7	0.0	chr2	152035279	152035555	(90157974)	+	AluSp	SINE/Alu	1	279	(34)	2131736
82	6.6	0.0	0.0	chr2	152035556	152035652	(90157877)	+	(TC)n	Simple_repeat	1	97	(0)	2131737
18	12.1	0.0	0.0	chr2	152035653	152035680	(90157849)	+	(AT)n	Simple_repeat	1	28	(0)	2131738
21	4.0	0.0	0.0	chr2	152293336	152293361	(89900168)	+	(TG)n	Simple_repeat	1	26	(0)	2132195
45	2.4	0.0	0.0	chr2	152293370	152293412	(89900117)	+	(AG)n	Simple_repeat	1	43	(0)	2132196
378	30.2	5.4	6.3	chr2	152293463	152293667	(89899862)	+	MIR3	SINE/MIR	5	207	(1)	2132197
14	16.9	3.0	0.0	chr2	153478867	153478899	(88714630)	+	(GGC)n	Simple_repeat	1	34	(0)	2133771
81	2.6	0.0	0.0	chr2	154110337	154110414	(88083115)	+	(AG)n	Simple_repeat	1	78	(0)	2134515
2927	8.4	1.4	8.8	chr2	154110415	154110795	(88082734)	C	MLT2A1	LTR/ERVL	(60)	384	1	2134514
7382	8.5	2.5	0.6	chr2	154576160	154577182	(87616347)	C	HERVS71-int	LTR/ERV1	(7483)	1495	453	2135143
250	13.7	7.7	0.0	chr2	154577135	154577302	(87616227)	+	HERVIP10FH-int	LTR/ERV1	782	963	(4139)	2135144
3270	11.4	1.2	1.0	chr2	154577255	154577751	(87615778)	C	HERVS71-int	LTR/ERV1	(8477)	501	4	2135143
17	4.9	0.0	0.0	chr2	156333341	156333361	(85860168)	+	(TC)n	Simple_repeat	1	21	(0)	2137289
83	22.3	1.5	1.0	chr2	156535275	156535469	(85658060)	+	GA-rich	Low_complexity	1	198	(0)	2137616
8814	9.6	1.1	0.9	chr2	156780965	156782956	(85410573)	+	L1PB1	LINE/L1	4157	6151	(0)	2137909
50	0.0	3.7	1.8	chr2	157647021	157647074	(84546455)	+	(CT)n	Simple_repeat	1	56	(0)	2138998
12	4.7	4.5	0.0	chr2	157839070	157839091	(84354438)	+	(TTTA)n	Simple_repeat	1	23	(0)	2139263
34	5.6	0.0	0.0	chr2	158222452	158222489	(83971040)	+	(CT)n	Simple_repeat	1	38	(0)	2139874
293	35.2	17.3	4.0	chr2	158222504	158222831	(83970698)	+	L2c	LINE/L2	361	741	(2678)	2139875
30	0.0	3.5	0.0	chr2	158487775	158487803	(83705726)	+	(GA)n	Simple_repeat	1	30	(0)	2140194
17	11.2	0.0	0.0	chr2	158487807	158487836	(83705693)	+	(GGGA)n	Simple_repeat	1	30	(0)	2140195
830	23.2	8.2	0.0	chr2	158956849	158957016	(83236513)	+	FAM	SINE/Alu	2	184	(1)	2140887
994	24.5	6.4	3.5	chr2	158957048	158957334	(83236195)	+	MLT1C	LTR/ERVL-MaLR	172	467	(0)	2140886
16	0.0	5.0	0.0	chr2	159616568	159616587	(82576942)	+	(TC)n	Simple_repeat	1	21	(0)	2141865
315	22.6	15.3	9.5	chr2	159895507	159895653	(82297876)	C	MIRc	SINE/MIR	(41)	227	71	2142322
35	16.9	0.0	0.0	chr2	160994182	160994247	(81199282)	+	GA-rich	Low_complexity	1	66	(0)	2143824
21	4.0	0.0	0.0	chr2	160994247	160994272	(81199257)	+	(GT)n	Simple_repeat	1	26	(0)	2143825
67	4.3	0.0	0.0	chr2	163408386	163408456	(78785073)	+	(AG)n	Simple_repeat	1	71	(0)	2146911
2771	20.6	0.7	6.9	chr2	163408457	163408976	(78784553)	C	MLT2B3	LTR/ERVL	(46)	508	1	2146910
40	0.0	0.0	0.0	chr2	163455455	163455488	(78738041)	+	(GA)n	Simple_repeat	1	34	(0)	2146988
12	16.6	0.0	0.0	chr2	163604754	163604780	(78588749)	+	(ACAC)n	Simple_repeat	1	27	(0)	2147200
47	22.8	3.9	0.7	chr2	163604781	163604910	(78588619)	+	GA-rich	Low_complexity	1	135	(0)	2147201
343	30.4	4.1	0.6	chr2	163704480	163704604	(78488925)	+	MIR1_Amn	SINE/MIR	30	156	(112)	2147356
44	2.4	0.0	0.0	chr2	163704616	163704657	(78488872)	+	(TC)n	Simple_repeat	1	42	(0)	2147357
27	0.0	0.0	0.0	chr2	163704658	163704687	(78488842)	+	(AC)n	Simple_repeat	1	30	(0)	2147358
180	20.0	14.9	0.0	chr2	163704688	163704727	(78488802)	+	MIR	SINE/MIR	216	262	(0)	2147356
5353	23.1	11.4	3.8	chr2	163797521	163799207	(78394322)	C	L1MEc	LINE/L1	(4166)	2234	399	2147477
54	2.0	0.0	0.0	chr2	163799208	163799258	(78394271)	+	(TC)n	Simple_repeat	1	51	(0)	2147478
452	34.9	3.9	6.0	chr2	163812845	163812959	(78380570)	C	LTR86B2	LTR/ERVL	(170)	317	211	2147493
38	0.0	0.0	0.0	chr2	163812960	163812992	(78380537)	+	(TC)n	Simple_repeat	1	33	(0)	2147494
452	34.9	3.9	6.0	chr2	163812993	163813193	(78380336)	C	LTR86B2	LTR/ERVL	(277)	210	8	2147493
18	15.7	2.6	2.6	chr2	164359033	164359070	(77834459)	+	(CT)n	Simple_repeat	1	39	(0)	2148200
17	13.7	0.0	0.0	chr2	164742852	164742883	(77450646)	+	(AGAGAG)n	Simple_repeat	1	32	(0)	2148709
40	8.1	0.0	0.0	chr2	165410700	165410751	(76782778)	+	(CT)n	Simple_repeat	1	52	(0)	2149620
410	12.3	0.0	0.0	chr2	165430931	165430995	(76762534)	C	L1PA8	LINE/L1	(9)	6163	6099	2149646
54	10.2	1.2	0.0	chr2	165431016	165431100	(76762429)	+	(TCTC)n	Simple_repeat	1	86	(0)	2149647
17	23.9	4.1	0.0	chr2	165471815	165471863	(76721666)	+	GA-rich	Low_complexity	1	51	(0)	2149704
275	25.0	16.6	0.7	chr2	165502519	165502655	(76690874)	C	L1ME4b	LINE/L1	(487)	405	243	2149745
36	25.6	2.1	0.0	chr2	165502680	165502776	(76690753)	+	(TC)n	Simple_repeat	1	99	(0)	2149746
1747	15.8	0.7	2.8	chr2	165665479	165665762	(76527767)	+	AluJr	SINE/Alu	1	278	(34)	2149974
526	26.6	1.6	1.2	chr2	165665766	165667178	(76526351)	+	A-rich	Low_complexity	1	1436	(0)	2149975
38	6.4	0.0	0.0	chr2	165796325	165796373	(76397156)	+	(AG)n	Simple_repeat	1	49	(0)	2150136
1475	10.4	10.4	1.2	chr2	165796374	165796616	(76396913)	C	Tigger4b	DNA/TcMar-Tigger	(93)	268	1	2150137
2082	25.1	7.4	3.2	chr2	165825013	165825620	(76367909)	C	HAL1	LINE/L1	(658)	1849	1228	2150186
41	11.5	0.0	0.0	chr2	166176666	166176731	(76016798)	+	(GAGA)n	Simple_repeat	1	66	(0)	2150668
281	20.0	1.2	2.4	chr2	166255067	166255148	(75938381)	C	HERVFH19-int	LTR/ERV1	(7352)	367	287	2150770
14	9.1	0.0	0.0	chr2	166373989	166374012	(75819517)	+	(ATTT)n	Simple_repeat	1	24	(0)	2150939
262	37.6	15.8	1.4	chr2	166402951	166403171	(75790358)	+	MIRc	SINE/MIR	2	260	(8)	2150977
1294	17.2	7.2	3.9	chr2	168476972	168477166	(73716363)	C	MLT1A0	LTR/ERVL-MaLR	(16)	349	152	2153614
57	1.9	0.0	0.0	chr2	168477167	168477219	(73716310)	+	(GA)n	Simple_repeat	1	53	(0)	2153615
1294	17.2	7.2	3.9	chr2	168477220	168477359	(73716170)	C	MLT1A0	LTR/ERVL-MaLR	(214)	151	2	2153614
56	0.0	0.0	0.0	chr2	168645143	168645190	(73548339)	+	(AG)n	Simple_repeat	1	48	(0)	2153861
938	24.3	3.3	2.2	chr2	168982492	168982760	(73210769)	+	hAT-N1_Mam	DNA/hAT-Tip100?	32	303	(37)	2154356
35	4.5	2.2	0.0	chr2	168982768	168982813	(73210716)	+	(GA)n	Simple_repeat	1	47	(0)	2154357
98	5.8	2.4	0.0	chr2	169361307	169361431	(72832098)	+	(TC)n	Simple_repeat	1	128	(0)	2154844
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
505	25.4	11.6	0.5	chr2	169835782	169835987	(72357542)	C	L1ME3Cz	LINE/L1	(7)	990	759	2155705
60	0.0	0.0	0.0	chr2	169835994	169836044	(72357485)	+	(TC)n	Simple_repeat	1	51	(0)	2155706
308	30.7	4.1	3.5	chr2	170485218	170485386	(71708143)	C	L1ME3Cz	LINE/L1	(6)	918	749	2156708
41	0.0	0.0	0.0	chr2	170485387	170485421	(71708108)	+	(AC)n	Simple_repeat	1	35	(0)	2156709
25	15.4	0.0	0.0	chr2	170485422	170485464	(71708065)	+	GA-rich	Low_complexity	1	43	(0)	2156710
30	8.5	1.9	1.9	chr2	171563625	171563676	(70629853)	+	(TC)n	Simple_repeat	1	53	(0)	2158654
308	25.2	14.2	5.7	chr2	171563781	171564015	(70629514)	+	L1ME4a	LINE/L1	5733	5994	(130)	2158655
17	15.9	8.6	1.6	chr2	171894270	171894327	(70299202)	+	(GCGCGCC)n	Simple_repeat	1	63	(0)	2159210
1195	18.4	7.9	0.5	chr2	171937780	171938002	(70255527)	+	AluJr	SINE/Alu	41	281	(31)	2159304
60	0.0	0.0	0.0	chr2	171938025	171938075	(70255454)	+	(TC)n	Simple_repeat	1	51	(0)	2159305
855	15.8	0.0	1.6	chr2	171938110	171938236	(70255293)	+	AluJr4	SINE/Alu	1	125	(187)	2159306
17	25.8	0.0	3.4	chr2	172099123	172099181	(70094348)	+	G-rich	Low_complexity	1	59	(0)	2159590
5031	7.5	3.9	3.7	chr2	172591691	172592587	(69600942)	C	HERV9N-int	LTR/ERV1	(633)	4741	4027	2160373
61	0.0	0.0	0.0	chr2	173320642	173320693	(68872836)	+	(TC)n	Simple_repeat	1	52	(0)	2161480
2365	9.9	0.0	0.0	chr2	173320743	173321046	(68872483)	+	AluYm1	SINE/Alu	1	304	(7)	2161481
363	28.0	9.1	9.1	chr2	173868567	173868746	(68324783)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	421	2162307
38	8.3	0.0	0.0	chr2	173868747	173868797	(68324732)	+	(CT)n	Simple_repeat	1	51	(0)	2162308
363	28.0	9.1	9.1	chr2	173868798	173868989	(68324540)	C	MLT1K	LTR/ERVL-MaLR	(175)	420	217	2162307
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
27	27.8	4.9	3.5	chr2	173964826	173964867	(68228662)	+	(CTCCCCT)n	Simple_repeat	4	170	(0)	2162461
12	17.1	2.9	2.8	chr2	173964835	173964869	(68228660)	+	(CGCT)n	Simple_repeat	1	36	(0)	2162462
13	7.8	3.5	3.3	chr2	173965000	173965028	(68228501)	+	(GGAGG)n	Simple_repeat	1	30	(0)	2162463
23	17.3	0.0	5.2	chr2	173965080	173965137	(68228392)	+	(CGG)n	Simple_repeat	1	58	(0)	2162464
18	16.3	2.3	2.2	chr2	174211161	174211176	(67982353)	+	(CTCT)n	Simple_repeat	1	17	(0)	2162866
31	0.0	3.3	0.0	chr2	174211177	174211206	(67982323)	+	(CA)n	Simple_repeat	1	31	(0)	2162867
18	16.3	2.3	2.2	chr2	174211207	174211233	(67982296)	+	(CTCT)n	Simple_repeat	2	28	(0)	2162868
24	12.2	0.0	0.0	chr2	174547046	174547081	(67646448)	+	(GA)n	Simple_repeat	1	36	(0)	2163457
227	25.9	1.7	0.0	chr2	174547085	174547142	(67646387)	+	LTR78	LTR/ERV1	563	621	(683)	2163458
16	13.2	2.8	2.7	chr2	174599769	174599792	(67593737)	+	(AC)n	Simple_repeat	1	25	(0)	2163549
41	6.4	0.0	0.0	chr2	174599793	174599841	(67593688)	+	(CT)n	Simple_repeat	1	49	(0)	2163550
16	13.2	2.8	2.7	chr2	174599842	174599852	(67593677)	+	(AC)n	Simple_repeat	2	11	(0)	2163551
1854	13.2	5.6	1.4	chr2	174599882	174600173	(67593356)	C	MER1B	DNA/hAT-Charlie	(1)	338	34	2163552
49	2.0	2.0	0.0	chr2	174990214	174990263	(67203266)	+	(GT)n	Simple_repeat	1	51	(0)	2164130
25	35.6	1.0	0.0	chr2	174990264	174990366	(67203163)	+	GA-rich	Low_complexity	1	104	(0)	2164131
23	15.6	3.2	4.6	chr2	175005224	175005286	(67188243)	+	(GGC)n	Simple_repeat	1	65	(0)	2164159
42	0.0	0.0	0.0	chr2	175142686	175142721	(67050808)	+	(AG)n	Simple_repeat	1	36	(0)	2164362
27	0.0	0.0	0.0	chr2	175142722	175142751	(67050778)	+	(TG)n	Simple_repeat	1	30	(0)	2164363
18	24.4	0.0	0.0	chr2	175142789	175142836	(67050693)	+	GA-rich	Low_complexity	1	48	(0)	2164364
19	4.3	0.0	0.0	chr2	175142836	175142859	(67050670)	+	(GT)n	Simple_repeat	1	24	(0)	2164365
1012	15.1	0.7	2.6	chr2	175142865	175143016	(67050513)	C	AluJr	SINE/Alu	(30)	282	134	2164366
164	16.8	2.3	3.8	chr2	175223125	175223510	(66970019)	+	(CTTT)n	Simple_repeat	1	395	(0)	2164495
226	33.5	5.8	1.9	chr2	175223511	175223559	(66969970)	C	L1MB7	LINE/L1	(159)	6009	5953	2164496
1795	16.0	0.7	0.4	chr2	175223560	175223828	(66969701)	C	AluJb	SINE/Alu	(38)	274	5	2164497
54	17.1	0.0	0.0	chr2	176084663	176084762	(66108767)	+	GA-rich	Low_complexity	1	100	(0)	2165644
15	11.9	0.0	9.1	chr2	176106942	176106985	(66086544)	+	(GCGG)n	Simple_repeat	1	44	(0)	2165665
13	21.9	0.0	7.3	chr2	176106994	176107048	(66086481)	+	(GCGGCCA)n	Simple_repeat	1	55	(0)	2165666
327	27.5	11.9	6.6	chr2	176595942	176596124	(65597405)	+	MLT1J	LTR/ERVL-MaLR	301	494	(18)	2166374
34	3.0	0.0	0.0	chr2	177076957	177076990	(65116539)	+	(CT)n	Simple_repeat	1	34	(0)	2167050
3255	13.9	0.6	6.8	chr2	177201608	177202168	(64991361)	C	MER1A	DNA/hAT-Charlie	(0)	529	4	2167268
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
286	33.8	5.0	0.2	chr2	177819766	177819877	(64373652)	+	MIR3	SINE/MIR	21	140	(90)	2168136
30	21.1	0.0	0.0	chr2	177819878	177819937	(64373592)	+	(CT)n	Simple_repeat	1	60	(0)	2168137
1870	18.9	0.0	0.0	chr2	178224653	178224943	(63968586)	+	AluJb	SINE/Alu	1	291	(21)	2168764
51	8.2	1.3	1.2	chr2	178224948	178225026	(63968503)	+	(TC)n	Simple_repeat	1	80	(0)	2168765
1743	14.2	11.4	12.7	chr2	179309143	179309576	(62883953)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2169995
16	20.7	4.1	7.9	chr2	179861032	179861128	(62332401)	+	G-rich	Low_complexity	1	101	(0)	2170734
929	26.1	8.8	4.8	chr2	179898884	179899241	(62294288)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2170789
1813	15.2	0.4	0.7	chr2	180485239	180485507	(61708022)	+	AluJr	SINE/Alu	1	268	(44)	2171532
59	6.2	0.0	0.0	chr2	180485510	180485577	(61707952)	+	(CT)n	Simple_repeat	1	68	(0)	2171533
56	10.0	2.3	0.0	chr2	180674993	180675078	(61518451)	+	(GA)n	Simple_repeat	1	88	(0)	2171764
1407	26.6	5.9	2.6	chr2	180947004	180947381	(61246148)	C	MLT1F1	LTR/ERVL-MaLR	(2)	567	177	2172095
27	0.0	0.0	0.0	chr2	180947386	180947415	(61246114)	+	(GA)n	Simple_repeat	1	30	(0)	2172096
2092	18.7	0.3	0.3	chr2	182242494	182242847	(59950682)	+	MLT2D	LTR/ERVL	2	355	(59)	2173691
60	4.1	4.0	0.0	chr2	182242852	182242926	(59950603)	+	(TC)n	Simple_repeat	1	78	(0)	2173692
22	3.6	3.5	0.0	chr2	182242927	182242955	(59950574)	+	(GT)n	Simple_repeat	1	30	(0)	2173693
2484	32.9	8.3	4.9	chr2	182300310	182302014	(59891515)	+	ERV3-16A3_I-int	LTR/ERVL	3363	5131	(95)	2173774
30	0.0	0.0	0.0	chr2	182635675	182635700	(59557829)	+	(TC)n	Simple_repeat	1	26	(0)	2174251
1689	14.1	0.0	11.3	chr2	182649908	182650093	(59543436)	+	AluJo	SINE/Alu	126	289	(23)	2174275
1295	22.5	16.5	1.4	chr2	182668545	182669053	(59524476)	C	LTR18B	LTR/ERVL	(13)	601	1	2174295
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
288	5.4	2.6	0.0	chr2	186849699	186849735	(55343794)	+	AluYa5	SINE/Alu	143	180	(131)	2179611
46	0.0	2.1	2.1	chr2	186849757	186849803	(55343726)	+	(TC)n	Simple_repeat	1	48	(0)	2179612
24	0.0	0.0	0.0	chr2	186849804	186849829	(55343700)	+	(GT)n	Simple_repeat	1	26	(0)	2179613
6430	15.2	4.7	2.9	chr2	187256384	187256706	(54936823)	+	Tigger3b	DNA/TcMar-Tigger	933	1231	(0)	2180166
49	4.0	0.0	0.0	chr2	187256761	187256811	(54936718)	+	(CT)n	Simple_repeat	1	51	(0)	2180168
522	33.4	8.9	6.5	chr2	187543635	187544114	(54649415)	+	MLT1L	LTR/ERVL-MaLR	100	592	(18)	2180511
35	22.7	0.0	0.0	chr2	188296902	188296983	(53896546)	+	(CTCT)n	Simple_repeat	1	82	(0)	2181480
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
193	26.0	4.1	0.5	chr2	191317998	191318057	(50875472)	C	L2b	LINE/L2	(4)	3422	3311	2185688
187	30.9	7.6	1.0	chr2	191318143	191318240	(50875289)	C	L2b	LINE/L2	(150)	3237	3133	2185688
989	27.9	5.5	6.2	chr2	191531627	191532028	(50661501)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	46	2186001
44	9.3	4.2	0.0	chr2	191532104	191532174	(50661355)	+	(GA)n	Simple_repeat	1	74	(0)	2186002
50	4.8	1.5	0.0	chr2	192037608	192037672	(50155857)	+	(GA)n	Simple_repeat	1	66	(0)	2186748
69	4.3	0.0	0.0	chr2	192193737	192193808	(49999721)	+	(GA)n	Simple_repeat	1	72	(0)	2186920
9093	8.5	0.8	1.5	chr2	195337190	195338509	(46855020)	C	HERV17-int	LTR/ERV1	(6612)	2014	704	2190745
19	19.8	6.1	0.0	chr2	195338510	195338558	(46854971)	+	(CT)n	Simple_repeat	1	52	(0)	2190746
46	0.0	0.0	0.0	chr2	196088891	196088929	(46104600)	+	(AG)n	Simple_repeat	1	39	(0)	2191878
746	28.7	8.4	4.6	chr2	196088930	196089195	(46104334)	C	L1M4a1	LINE/L1	(1156)	1423	1133	2191877
17188	13.5	1.7	0.4	chr2	196368346	196369342	(45824187)	C	L1M1	LINE/L1	(4781)	2784	1767	2192284
47	0.0	0.0	0.0	chr2	196369343	196369382	(45824147)	+	(TC)n	Simple_repeat	1	40	(0)	2192285
17188	13.5	1.7	0.4	chr2	196369383	196371116	(45822413)	C	L1M1	LINE/L1	(5799)	1766	16	2192284
6109	17.8	7.8	5.3	chr2	196852388	196853938	(45339591)	+	MER101-int	LTR/ERV1	1721	3492	(3147)	2192996
660	12.4	7.4	0.9	chr2	196967798	196967912	(45225617)	+	MSTA	LTR/ERVL-MaLR	2	129	(236)	2193171
34	0.0	0.0	0.0	chr2	196967913	196967941	(45225588)	+	(CT)n	Simple_repeat	1	29	(0)	2193172
1548	11.4	0.1	0.0	chr2	196967942	196968154	(45225375)	+	MSTA	LTR/ERVL-MaLR	126	428	(0)	2193171
24	12.6	0.0	0.0	chr2	196987961	196987996	(45205533)	+	(GA)n	Simple_repeat	1	36	(0)	2193213
42	0.0	0.0	0.0	chr2	197034051	197034086	(45159443)	+	(AG)n	Simple_repeat	1	36	(0)	2193292
304	36.6	1.7	8.0	chr2	197034133	197034319	(45159210)	+	MamRTE1	LINE/RTE-BovB	3514	3688	(124)	2193293
1976	14.3	6.7	5.0	chr2	197187453	197187644	(45005885)	+	MLT1B	LTR/ERVL-MaLR	1	190	(200)	2193536
53	4.5	4.3	0.0	chr2	197187645	197187713	(45005816)	+	(TC)n	Simple_repeat	1	72	(0)	2193537
17	15.9	0.0	0.0	chr2	197310728	197310762	(44882767)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	2193752
12	11.1	6.9	0.0	chr2	197310864	197310892	(44882637)	+	(CGCT)n	Simple_repeat	1	31	(0)	2193753
32	22.4	6.0	3.8	chr2	197310893	197311012	(44882517)	+	(CCGCCGC)n	Simple_repeat	2	159	(0)	2193754
1815	11.9	3.6	2.9	chr2	197347667	197347943	(44845586)	+	AluJo	SINE/Alu	7	285	(27)	2193835
38	0.0	0.0	0.0	chr2	197347944	197347976	(44845553)	+	(AG)n	Simple_repeat	1	33	(0)	2193836
2108	10.9	0.0	0.3	chr2	197373678	197373960	(44819569)	C	AluSx	SINE/Alu	(30)	282	1	2193896
128	1.7	0.8	0.0	chr2	197374036	197374156	(44819373)	+	(TC)n	Simple_repeat	1	122	(0)	2193897
42	0.0	0.0	0.0	chr2	197461560	197461595	(44731934)	+	(TG)n	Simple_repeat	1	36	(0)	2194075
44	0.0	0.0	0.0	chr2	197461628	197461665	(44731864)	+	(AG)n	Simple_repeat	1	38	(0)	2194076
1836	13.2	5.0	0.0	chr2	197461670	197461934	(44731595)	C	AluSx	SINE/Alu	(33)	279	1	2194077
12	8.9	10.5	2.4	chr2	197675992	197676029	(44517500)	+	(CCTCT)n	Simple_repeat	1	42	(0)	2194467
58	19.3	0.8	0.8	chr2	197676041	197676169	(44517360)	+	GA-rich	Low_complexity	1	129	(0)	2194468
891	22.6	8.5	4.6	chr2	197685365	197685670	(44507859)	C	MER39	LTR/ERV1	(78)	629	311	2194486
19	11.6	0.0	0.0	chr2	197685680	197685708	(44507821)	+	(GA)n	Simple_repeat	1	29	(0)	2194487
5062	12.1	1.1	4.4	chr2	197685762	197685875	(44507654)	C	L1PB2	LINE/L1	(3)	6148	6036	2194488
42	0.0	0.0	0.0	chr2	198055295	198055330	(44138199)	+	(CT)n	Simple_repeat	1	36	(0)	2194968
16	5.2	0.0	0.0	chr2	198055331	198055350	(44138179)	+	(GT)n	Simple_repeat	1	20	(0)	2194969
37	2.9	0.0	0.0	chr2	198055353	198055388	(44138141)	+	(GA)n	Simple_repeat	1	36	(0)	2194970
1267	16.1	13.9	1.0	chr2	198203163	198203373	(43990156)	C	MER44A	DNA/TcMar-Tigger	(0)	339	114	2195179
38	7.0	0.0	0.0	chr2	198203374	198203419	(43990110)	+	(TC)n	Simple_repeat	1	46	(0)	2195180
1267	16.1	13.9	1.0	chr2	198203420	198203502	(43990027)	C	MER44A	DNA/TcMar-Tigger	(226)	113	2	2195179
396	30.5	13.9	6.6	chr2	198203503	198203861	(43989668)	C	MLT1J2	LTR/ERVL-MaLR	(53)	395	1	2195178
82	7.5	0.0	0.0	chr2	198277578	198277690	(43915839)	+	(TCTCTC)n	Simple_repeat	1	113	(0)	2195308
395	38.5	2.8	1.1	chr2	198277691	198277968	(43915561)	C	LTR85b	LTR/Gypsy?	(495)	289	7	2195309
25	0.0	0.0	0.0	chr2	198316972	198316999	(43876530)	+	(TG)n	Simple_repeat	1	28	(0)	2195384
37	10.1	0.0	0.0	chr2	198316999	198317051	(43876478)	+	(GA)n	Simple_repeat	1	53	(0)	2195385
38	0.0	0.0	0.0	chr2	198525930	198525962	(43667567)	+	(CT)n	Simple_repeat	1	33	(0)	2195647
73	0.0	0.0	0.0	chr2	198640168	198640229	(43553300)	+	(GA)n	Simple_repeat	1	62	(0)	2195796
533	11.8	0.0	0.0	chr2	199489414	199489489	(42704040)	C	AluJo	SINE/Alu	(0)	312	237	2196890
344	15.4	0.0	0.0	chr2	199489490	199489541	(42703988)	C	AluJr4	SINE/Alu	(171)	141	90	2196891
47	0.0	0.0	0.0	chr2	199489558	199489597	(42703932)	+	(CT)n	Simple_repeat	1	40	(0)	2196892
1871	18.4	0.0	0.0	chr2	199489598	199489891	(42703638)	C	AluJo	SINE/Alu	(17)	295	2	2196893
448	31.2	0.7	2.2	chr2	199583728	199583880	(42609649)	+	MIR3	SINE/MIR	16	171	(59)	2197054
1942	19.1	3.1	8.7	chr2	199744224	199744445	(42449084)	+	MLT1B	LTR/ERVL-MaLR	1	199	(191)	2197266
31	3.3	0.0	0.0	chr2	199744446	199744476	(42449053)	+	(AG)n	Simple_repeat	1	31	(0)	2197267
1942	19.1	3.1	8.7	chr2	199744477	199744667	(42448862)	+	MLT1B	LTR/ERVL-MaLR	200	390	(0)	2197266
12	21.8	5.3	3.3	chr2	200509853	200509909	(41683620)	+	(GCCCGA)n	Simple_repeat	1	60	(0)	2198446
11	27.6	1.0	9.1	chr2	200509910	200509948	(41683581)	+	(CGGCCCG)n	Simple_repeat	3	99	(0)	2198447
261	22.5	7.0	0.0	chr2	200725781	200725860	(41467669)	C	MER112	DNA/hAT-Charlie	(5)	256	171	2198744
55	15.3	1.1	0.0	chr2	200725874	200725968	(41467561)	+	GA-rich	Low_complexity	1	96	(0)	2198745
284	15.9	13.7	4.3	chr2	200726063	200726154	(41467375)	C	MER112	DNA/hAT-Charlie	(159)	102	1	2198744
1750	16.8	2.7	0.0	chr2	200746905	200747189	(41446340)	+	AluJb	SINE/Alu	3	295	(17)	2198774
36	2.4	4.8	0.0	chr2	200747294	200747335	(41446194)	+	(TC)n	Simple_repeat	1	44	(0)	2198775
19	8.1	0.0	0.0	chr2	201884181	201884206	(40309323)	+	(CT)n	Simple_repeat	1	26	(0)	2200763
65	1.7	0.0	0.0	chr2	202393875	202393934	(39799595)	+	(GA)n	Simple_repeat	1	60	(0)	2201896
1800	18.6	0.3	2.9	chr2	202428395	202428706	(39764823)	C	AluJo	SINE/Alu	(8)	304	1	2201983
1100	13.5	2.4	11.9	chr2	202443252	202443487	(39750042)	C	L1MB2	LINE/L1	(476)	5695	5483	2202021
35	14.0	1.6	0.0	chr2	202443489	202443552	(39749977)	+	(CTCT)n	Simple_repeat	1	65	(0)	2202023
1445	13.0	0.0	0.0	chr2	202443553	202443744	(39749785)	C	AluSx	SINE/Alu	(1)	311	120	2202024
38	6.0	0.0	0.0	chr2	202654052	202654103	(39539426)	+	(AGAG)n	Simple_repeat	1	52	(0)	2202460
20	10.8	0.0	0.0	chr2	202654097	202654126	(39539403)	+	(GT)n	Simple_repeat	1	30	(0)	2202461
4131	21.0	9.1	10.9	chr2	202655455	202655700	(39537829)	C	L1MEf	LINE/L1	(2391)	4153	3916	2202464
67	1.6	0.0	0.0	chr2	202655701	202655762	(39537767)	+	(AG)n	Simple_repeat	1	62	(0)	2202465
4321	21.0	9.1	10.9	chr2	202655763	202655784	(39537745)	C	L1MEf	LINE/L1	(2629)	3915	3893	2202464
683	12.3	1.9	0.0	chr2	202655785	202655890	(39537639)	C	HY1	scRNA	(5)	114	7	2202466
9830	16.4	5.0	7.1	chr2	203002371	203002809	(39190720)	+	L1MCa	LINE/L1	28	455	(6053)	2203112
13	20.8	0.0	0.0	chr2	203328209	203328241	(38865288)	+	G-rich	Low_complexity	1	33	(0)	2203790
369	14.3	0.0	3.1	chr2	203370069	203370133	(38823396)	C	MER58C	DNA/hAT-Charlie	(2)	213	150	2203880
48	0.0	0.0	0.0	chr2	203370187	203370227	(38823302)	+	(TC)n	Simple_repeat	1	41	(0)	2203881
54	3.7	0.0	0.0	chr2	203713835	203713889	(38479640)	+	(GA)n	Simple_repeat	1	55	(0)	2204520
15	0.0	0.0	0.0	chr2	203713890	203713906	(38479623)	+	(TG)n	Simple_repeat	1	17	(0)	2204521
22	0.0	0.0	0.0	chr2	204046956	204046979	(38146550)	+	(TG)n	Simple_repeat	1	24	(0)	2205046
50	9.1	0.0	0.0	chr2	204046979	204047048	(38146481)	+	(GA)n	Simple_repeat	1	70	(0)	2205047
12	12.3	10.9	2.0	chr2	204226052	204226097	(37967432)	+	GA-rich	Low_complexity	1	51	(0)	2205323
51	0.0	0.0	0.0	chr2	204459485	204459528	(37734001)	+	(TC)n	Simple_repeat	1	44	(0)	2205651
1425	20.9	10.4	3.1	chr2	204562971	204563217	(37630312)	C	MLT1C	LTR/ERVL-MaLR	(7)	460	189	2205812
62	1.7	1.6	0.0	chr2	204563218	204563278	(37630251)	+	(TC)n	Simple_repeat	1	62	(0)	2205813
1425	20.9	10.4	3.1	chr2	204563279	204563455	(37630074)	C	MLT1C	LTR/ERVL-MaLR	(279)	188	2	2205812
2079	9.0	4.0	0.0	chr2	204596647	204596912	(37596617)	+	AluSp	SINE/Alu	1	277	(36)	2205856
43	4.5	0.0	0.0	chr2	204596918	204596963	(37596566)	+	(CT)n	Simple_repeat	1	46	(0)	2205857
61	0.0	0.0	0.0	chr2	204861163	204861214	(37332315)	+	(TC)n	Simple_repeat	1	52	(0)	2206167
55	0.0	0.0	0.0	chr2	204953421	204953467	(37240062)	+	(AG)n	Simple_repeat	1	47	(0)	2206288
70	2.6	3.8	0.0	chr2	205021573	205021651	(37171878)	+	(CT)n	Simple_repeat	1	82	(0)	2206364
514	15.8	0.0	1.9	chr2	205321320	205321422	(36872107)	C	L1MC4	LINE/L1	(0)	8042	7942	2206776
37	6.1	3.9	0.0	chr2	205321443	205321494	(36872035)	+	(TC)n	Simple_repeat	1	54	(0)	2206777
654	29.5	5.3	7.6	chr2	206230450	206230819	(35962710)	+	LTR88c	LTR/Gypsy?	4	364	(498)	2208273
23	12.7	1.7	5.0	chr2	206231020	206231056	(35962473)	+	(CCTT)n	Simple_repeat	1	37	(0)	2208274
33	0.0	0.0	0.0	chr2	206231057	206231084	(35962445)	+	(CT)n	Simple_repeat	1	28	(0)	2208275
1981	10.6	1.3	8.8	chr2	206231089	206231319	(35962210)	C	AluSx	SINE/Alu	(8)	304	97	2208276
32	3.2	0.0	0.0	chr2	206479673	206479704	(35713825)	+	(TC)n	Simple_repeat	1	32	(0)	2208691
62	0.0	0.0	0.0	chr2	207068037	207068089	(35125440)	+	(CT)n	Simple_repeat	1	53	(0)	2209504
17	23.9	5.6	0.0	chr2	207165736	207165789	(35027740)	+	GA-rich	Low_complexity	1	57	(0)	2209617
1186	21.0	14.6	4.6	chr2	207270268	207270425	(34923104)	+	MLT1B	LTR/ERVL-MaLR	1	181	(209)	2209767
31	8.1	0.0	0.0	chr2	207270426	207270465	(34923064)	+	(TC)n	Simple_repeat	1	40	(0)	2209768
1186	21.0	14.6	4.6	chr2	207270466	207270655	(34922874)	+	MLT1B	LTR/ERVL-MaLR	182	390	(0)	2209767
317	21.7	16.1	5.7	chr2	207621367	207621488	(34572041)	+	MIRc	SINE/MIR	126	262	(6)	2210330
18	11.1	0.0	3.2	chr2	207621595	207621625	(34571904)	+	(GA)n	Simple_repeat	1	31	(0)	2210331
946	17.0	4.2	0.0	chr2	208408546	208408704	(33784825)	+	AluJr	SINE/Alu	137	302	(10)	2211808
17	20.2	1.9	0.0	chr2	208408705	208408722	(33784807)	+	(AATAAGA)n	Simple_repeat	4	22	(0)	2211809
45	2.4	0.0	0.0	chr2	208408723	208408765	(33784764)	+	(AG)n	Simple_repeat	1	43	(0)	2211810
17	20.2	1.9	0.0	chr2	208408766	208408781	(33784748)	+	(AATAAGA)n	Simple_repeat	2	17	(0)	2211811
987	21.2	0.9	7.3	chr2	208408865	208409098	(33784431)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2211812
21	4.0	0.0	0.0	chr2	209961062	209961087	(32232442)	+	(TG)n	Simple_repeat	1	26	(0)	2213722
23	3.7	0.0	0.0	chr2	209961087	209961114	(32232415)	+	(GA)n	Simple_repeat	1	28	(0)	2213723
705	28.1	0.8	0.2	chr2	211152251	211152446	(31041083)	C	LTR16	LTR/ERVL	(0)	456	256	2215219
50	4.0	0.0	0.0	chr2	211152447	211152498	(31041031)	+	(TC)n	Simple_repeat	1	52	(0)	2215221
310	30.8	8.0	7.3	chr2	211152554	211152768	(31040761)	+	MIRb	SINE/MIR	35	246	(22)	2215222
2319	9.1	2.7	0.0	chr2	211992183	211992502	(30201027)	C	THE1A	LTR/ERVL-MaLR	(26)	329	1	2216343
36	10.0	4.5	1.4	chr2	211992503	211992568	(30200961)	+	GA-rich	Low_complexity	1	69	(0)	2216344
59	0.0	0.0	0.0	chr2	212188185	212188234	(30005295)	+	(TC)n	Simple_repeat	1	50	(0)	2216618
36	17.6	3.8	0.0	chr2	212188235	212188314	(30005215)	+	(CCTC)n	Simple_repeat	1	83	(0)	2216619
355	35.2	5.2	8.0	chr2	212487977	212488313	(29705216)	+	L2a	LINE/L2	1861	2187	(1232)	2217019
36	0.0	2.9	0.0	chr2	212488319	212488352	(29705177)	+	(CT)n	Simple_repeat	1	35	(0)	2217020
205	38.1	4.8	2.1	chr2	212488371	212488512	(29705017)	+	L2a	LINE/L2	2723	2868	(551)	2217019
18764	8.6	2.0	3.1	chr2	213406782	213411947	(28781582)	+	Harlequin-int	LTR/ERV1	1	7733	(4)	2218193
2152	11.5	2.7	4.7	chr2	214630271	214630653	(27562876)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2219866
888	18.4	3.4	17.3	chr2	215768516	215768752	(26424777)	+	MLT1A	LTR/ERVL-MaLR	173	396	(0)	2221620
72	26.8	6.1	0.0	chr2	216002731	216002994	(26190535)	+	(TCTC)n	Simple_repeat	1	280	(0)	2221973
322	14.3	0.0	0.0	chr2	216003089	216003137	(26190392)	C	AluSz6	SINE/Alu	(13)	299	251	2221974
195	34.6	4.9	0.0	chr2	216187709	216187786	(26005743)	+	L2b	LINE/L2	2065	2146	(1273)	2222312
32	0.0	0.0	0.0	chr2	216187787	216187821	(26005708)	+	(AC)n	Simple_repeat	1	35	(0)	2222313
56	5.8	1.4	1.3	chr2	216187822	216187895	(26005634)	+	(CT)n	Simple_repeat	1	75	(0)	2222314
2033	13.9	0.0	0.3	chr2	216263150	216263436	(25930093)	+	AluSx	SINE/Alu	6	291	(21)	2222428
101	13.3	0.6	0.0	chr2	216263437	216263599	(25929930)	+	(GAGA)n	Simple_repeat	1	164	(0)	2222429
551	32.6	12.9	1.6	chr2	216263601	216263965	(25929564)	C	L2a	LINE/L2	(2778)	641	230	2222425
670	26.2	5.0	5.8	chr2	216596095	216596317	(25597212)	+	MIRb	SINE/MIR	17	237	(31)	2223063
15	9.8	0.0	0.0	chr2	216596447	216596468	(25597061)	+	(GA)n	Simple_repeat	1	22	(0)	2223064
396	26.4	4.0	7.7	chr2	216596512	216596667	(25596862)	+	L2c	LINE/L2	3230	3379	(8)	2223058
50	0.0	0.0	0.0	chr2	216631588	216631630	(25561899)	+	(TC)n	Simple_repeat	1	43	(0)	2223154
26	0.0	0.0	0.0	chr2	216631631	216631659	(25561870)	+	(GT)n	Simple_repeat	1	29	(0)	2223155
2072	9.5	0.0	3.4	chr2	216631660	216631955	(25561574)	C	AluSx	SINE/Alu	(26)	286	1	2223156
25	0.0	0.0	0.0	chr2	216821663	216821690	(25371839)	+	(AT)n	Simple_repeat	1	28	(0)	2223494
59	0.0	0.0	0.0	chr2	216821691	216821740	(25371789)	+	(AG)n	Simple_repeat	1	50	(0)	2223495
55	6.7	2.5	1.2	chr2	217161761	217161841	(25031688)	+	(TC)n	Simple_repeat	1	83	(0)	2223995
43	9.0	0.0	0.0	chr2	217553680	217553738	(24639791)	+	(CT)n	Simple_repeat	1	59	(0)	2224577
38	0.0	0.0	0.0	chr2	217804257	217804289	(24389240)	+	(TC)n	Simple_repeat	1	33	(0)	2224983
232	26.6	13.8	0.0	chr2	217980456	217980506	(24213023)	+	L2b	LINE/L2	3259	3324	(51)	2225275
47	0.0	0.0	0.0	chr2	217980507	217980546	(24212983)	+	(AG)n	Simple_repeat	1	40	(0)	2225276
232	26.6	13.8	0.0	chr2	217980547	217980588	(24212941)	+	L2b	LINE/L2	3325	3366	(9)	2225275
27	23.6	3.3	3.2	chr2	217998208	217998297	(24195232)	+	(TC)n	Simple_repeat	1	93	(0)	2225305
56	3.4	1.7	0.0	chr2	218138483	218138542	(24054987)	+	(TC)n	Simple_repeat	1	61	(0)	2225504
13	25.0	5.3	3.8	chr2	218292381	218292456	(23901073)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	2225782
13	15.9	0.0	0.0	chr2	218292519	218292546	(23900983)	+	G-rich	Low_complexity	1	28	(0)	2225783
36	0.0	0.0	0.0	chr2	218357260	218357290	(23836239)	+	(TC)n	Simple_repeat	1	31	(0)	2225940
2031	12.6	0.0	0.4	chr2	218415633	218415910	(23777619)	+	AluSx1	SINE/Alu	1	277	(35)	2226074
62	0.0	0.0	0.0	chr2	218415912	218415964	(23777565)	+	(TC)n	Simple_repeat	1	53	(0)	2226075
37	2.4	0.0	0.0	chr2	218583191	218583233	(23610296)	+	(GT)n	Simple_repeat	1	43	(0)	2226423
63	0.0	0.0	0.0	chr2	218583234	218583287	(23610242)	+	(TC)n	Simple_repeat	1	54	(0)	2226424
32	8.3	1.9	0.0	chr2	218616899	218616927	(23576602)	+	(TA)n	Simple_repeat	1	29	(0)	2226503
69	0.0	0.0	0.0	chr2	218616928	218616986	(23576543)	+	(AG)n	Simple_repeat	1	59	(0)	2226504
2201	6.9	0.0	0.0	chr2	218616988	218617263	(23576266)	C	AluY	SINE/Alu	(35)	276	1	2226505
10838	8.8	5.3	3.3	chr2	219200448	219201991	(22991538)	C	LTR12C	LTR/ERV1	(0)	1579	3	2227518
21	6.8	0.0	0.0	chr2	219514387	219514417	(22679112)	+	(CGCT)n	Simple_repeat	1	31	(0)	2228053
15	21.4	0.0	0.0	chr2	219514495	219514532	(22678997)	+	(AGCAGC)n	Simple_repeat	1	38	(0)	2228054
2339	9.5	0.0	4.3	chr2	219685744	219686069	(22507460)	C	AluSx	SINE/Alu	(0)	312	1	2228330
44	6.4	3.0	1.4	chr2	219686139	219686205	(22507324)	+	(TC)n	Simple_repeat	1	69	(0)	2228331
286	34.5	0.0	2.5	chr2	219728850	219728971	(22464558)	C	MIR3	SINE/MIR	(70)	138	20	2228394
248	27.1	4.5	0.0	chr2	219779670	219779754	(22413775)	C	L2a	LINE/L2	(0)	3426	3338	2228483
41	8.8	1.7	0.0	chr2	219779783	219779842	(22413687)	+	(AG)n	Simple_repeat	1	61	(0)	2228484
1717	11.5	13.1	1.5	chr2	220236048	220236214	(21957315)	+	THE1D	LTR/ERVL-MaLR	1	211	(170)	2229242
49	4.0	0.0	0.0	chr2	220236215	220236265	(21957264)	+	(CT)n	Simple_repeat	1	51	(0)	2229243
1717	11.5	13.1	1.5	chr2	220236266	220236433	(21957096)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	2229242
49	2.2	0.0	0.0	chr2	220474104	220474149	(21719380)	+	(TC)n	Simple_repeat	1	46	(0)	2229579
2401	15.7	3.9	0.7	chr2	221129782	221130199	(21063330)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2230587
3648	19.9	12.2	0.8	chr2	221131178	221132116	(21061413)	+	L1MC4	LINE/L1	6841	7902	(140)	2230589
28	8.3	0.0	0.0	chr2	221132124	221132161	(21061368)	+	(TG)n	Simple_repeat	1	38	(0)	2230590
29	8.1	0.0	0.0	chr2	221132161	221132199	(21061330)	+	(GA)n	Simple_repeat	1	39	(0)	2230591
243	20.4	20.0	0.0	chr2	221132200	221132287	(21061242)	+	L1MC4	LINE/L1	7914	8023	(19)	2230589
297	31.9	2.4	3.3	chr2	221132361	221132505	(21061024)	+	L2a	LINE/L2	3212	3334	(92)	2230588
24	18.4	2.0	0.0	chr2	221255938	221255986	(20937543)	+	(TC)n	Simple_repeat	1	50	(0)	2230800
45	5.3	3.4	0.0	chr2	221276217	221276275	(20917254)	+	(TC)n	Simple_repeat	1	61	(0)	2230829
31	15.1	0.0	0.0	chr2	221470311	221470362	(20723167)	+	GA-rich	Low_complexity	1	52	(0)	2231109
42	0.0	0.0	0.0	chr2	221550419	221550454	(20643075)	+	(GA)n	Simple_repeat	1	36	(0)	2231238
625	30.5	7.5	0.5	chr2	221550515	221550738	(20642791)	C	MIR	SINE/MIR	(11)	251	11	2231239
5932	22.0	4.5	1.1	chr2	222332674	222332772	(19860757)	+	L1M2	LINE/L1	718	820	(6746)	2232440
95	2.3	0.0	0.0	chr2	222332773	222332862	(19860667)	+	(GA)n	Simple_repeat	1	90	(0)	2232441
15976	18.2	2.6	0.6	chr2	222332863	222335657	(19857872)	+	L1M2	LINE/L1	821	3675	(3890)	2232440
332	33.7	7.3	4.8	chr2	222426878	222427235	(19766294)	+	L2c	LINE/L2	3020	3387	(0)	2232579
315	27.8	10.0	0.8	chr2	222442717	222442843	(19750686)	C	Tigger19b	DNA/TcMar-Tigger	(92)	458	319	2232607
38	0.0	0.0	0.0	chr2	222605162	222605194	(19588335)	+	(TC)n	Simple_repeat	1	33	(0)	2232843
1055	15.4	1.2	0.0	chr2	222701114	222701275	(19492254)	+	AluSz6	SINE/Alu	137	300	(12)	2233013
113	29.4	4.4	0.5	chr2	222701276	222701680	(19491849)	+	GA-rich	Low_complexity	1	423	(0)	2233014
24	19.7	4.6	0.0	chr2	223155124	223155190	(19038339)	+	(TTTCTTT)n	Simple_repeat	1	70	(0)	2233820
51	4.5	4.2	1.3	chr2	223155218	223155289	(19038240)	+	(CT)n	Simple_repeat	1	75	(0)	2233821
2266	11.4	1.6	0.3	chr2	223155388	223155693	(19037836)	+	AluSx1	SINE/Alu	3	312	(0)	2233822
12	20.9	0.0	7.8	chr2	223837325	223837375	(18356154)	+	(GGCCC)n	Simple_repeat	1	51	(0)	2234958
2019	19.6	6.5	1.3	chr2	224253428	224253651	(17939878)	+	MLT2B1	LTR/ERVL	1	227	(293)	2235619
80	8.8	0.0	0.0	chr2	224253652	224253760	(17939769)	+	(TC)n	Simple_repeat	1	109	(0)	2235620
2019	19.6	6.5	1.3	chr2	224253761	224253990	(17939539)	+	MLT2B1	LTR/ERVL	228	480	(40)	2235619
69	11.5	0.0	0.0	chr2	224254322	224254424	(17939105)	+	(AG)n	Simple_repeat	1	103	(0)	2235624
1451	22.9	5.7	0.8	chr2	224681351	224681523	(17512006)	C	MSTD	LTR/ERVL-MaLR	(5)	391	203	2236371
33	0.0	0.0	0.0	chr2	224681524	224681551	(17511978)	+	(GA)n	Simple_repeat	1	28	(0)	2236372
1451	22.9	5.7	0.8	chr2	224681552	224681747	(17511782)	C	MSTD	LTR/ERVL-MaLR	(194)	202	3	2236371
1296	18.8	8.7	4.9	chr2	229113793	229114100	(13079429)	+	MLT2D	LTR/ERVL	2	322	(92)	2243027
62	4.8	0.0	0.0	chr2	229114102	229114167	(13079362)	+	(TC)n	Simple_repeat	1	66	(0)	2243028
38	2.3	4.5	0.0	chr2	229114168	229114211	(13079318)	+	(CA)n	Simple_repeat	1	46	(0)	2243029
235	17.5	0.0	0.0	chr2	229114217	229114256	(13079273)	+	MLT2D	LTR/ERVL	517	556	(0)	2243027
21	0.0	0.0	0.0	chr2	229753996	229754018	(12439511)	+	(AC)n	Simple_repeat	1	23	(0)	2244046
40	6.2	0.0	0.0	chr2	229754018	229754068	(12439461)	+	(AG)n	Simple_repeat	1	51	(0)	2244047
51	0.0	0.0	0.0	chr2	229864005	229864048	(12329481)	+	(AG)n	Simple_repeat	1	44	(0)	2244193
27	0.0	0.0	0.0	chr2	229864049	229864078	(12329451)	+	(TG)n	Simple_repeat	1	30	(0)	2244194
1537	25.0	11.3	4.4	chr2	229864105	229864782	(12328747)	C	Tigger9a	DNA/TcMar-Tigger	(0)	732	2	2244195
244	28.7	5.6	3.9	chr2	230067363	230067519	(12126010)	C	MIR1_Amn	SINE/MIR	(105)	163	8	2244678
49	1.9	3.8	0.0	chr2	230067520	230067572	(12125957)	+	(CT)n	Simple_repeat	1	55	(0)	2244679
16	23.0	0.0	0.0	chr2	230067573	230067613	(12125916)	+	(ACACAC)n	Simple_repeat	1	41	(0)	2244680
43	13.3	4.9	0.0	chr2	230687608	230687689	(11505840)	+	GA-rich	Low_complexity	1	86	(0)	2245530
36	6.8	0.0	0.0	chr2	230864697	230864743	(11328786)	+	(TGAG)n	Simple_repeat	1	47	(0)	2245825
16	20.2	5.3	5.1	chr2	230864784	230864858	(11328671)	+	(GGCGC)n	Simple_repeat	1	79	(0)	2245826
73	3.3	10.3	0.7	chr2	230943004	230943129	(11250400)	+	(AG)n	Simple_repeat	1	139	(0)	2245940
3573	8.7	0.5	3.5	chr2	231098104	231098700	(11094829)	C	HERVIP10FH-int	LTR/ERV1	(3837)	1265	687	2246222
7931	11.2	3.2	3.1	chr2	231098681	231100163	(11093366)	C	HERVIP10F-int	LTR/ERV1	(6172)	1431	1	2246221
37	20.0	4.1	0.0	chr2	231604662	231604758	(10588771)	+	(CCGGC)n	Simple_repeat	1	101	(0)	2247244
538	31.5	7.9	4.9	chr2	231882910	231883423	(10310106)	C	L1M5	LINE/L1	(1478)	4668	4138	2247831
334	23.1	3.4	14.4	chr2	231883484	231883723	(10309806)	+	L1MB3	LINE/L1	2922	3134	(3012)	2247826
1652	23.5	8.2	4.6	chr2	232270213	232270775	(9922754)	C	L1ME4a	LINE/L1	(12)	6112	5528	2248438
89	2.3	0.0	2.1	chr2	232270856	232270949	(9922580)	+	(TC)n	Simple_repeat	1	94	(0)	2248439
7883	23.7	5.6	1.9	chr2	232471435	232474484	(9719045)	C	L1MA8	LINE/L1	(3791)	3774	835	2248712
52	5.4	0.0	0.0	chr2	232631263	232631320	(9562209)	+	(TC)n	Simple_repeat	1	58	(0)	2249007
1418	13.8	6.0	9.0	chr2	232631321	232631610	(9561919)	C	AluJb	SINE/Alu	(31)	281	1	2249008
73	0.0	1.5	0.0	chr2	233054844	233054909	(9138620)	+	(AG)n	Simple_repeat	1	67	(0)	2249810
1165	23.8	5.3	2.7	chr2	233225405	233225733	(8967796)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	242	2250136
88	8.5	0.0	2.3	chr2	233225738	233225868	(8967661)	+	(GA)n	Simple_repeat	1	131	(0)	2250137
651	25.2	11.1	0.6	chr2	233225875	233226075	(8967454)	C	MLT1G1	LTR/ERVL-MaLR	(339)	221	1	2250136
57	0.0	0.0	0.0	chr2	234102940	234102988	(8090541)	+	(TC)n	Simple_repeat	1	49	(0)	2251370
35	0.0	0.0	0.0	chr2	234158374	234158403	(8035126)	+	(GA)n	Simple_repeat	1	30	(0)	2251466
1107	26.1	4.6	0.8	chr2	236078075	236078478	(6115051)	C	MLT2C1	LTR/ERVL	(37)	427	5	2254476
1012	17.3	0.0	0.0	chr2	236521502	236521657	(5671872)	+	AluJb	SINE/Alu	155	310	(2)	2255125
113	27.5	1.1	3.7	chr2	236521658	236521903	(5671626)	+	GA-rich	Low_complexity	1	239	(0)	2255126
225	33.3	4.8	0.0	chr2	236804485	236804604	(5388925)	C	L1ME3G	LINE/L1	(720)	204	79	2255523
43	2.5	0.0	0.0	chr2	236804652	236804692	(5388837)	+	(AG)n	Simple_repeat	1	41	(0)	2255524
2216	9.1	0.4	0.0	chr2	236804694	236804969	(5388560)	C	AluSx1	SINE/Alu	(35)	277	1	2255525
164	14.1	3.6	0.0	chr2	237556862	237557165	(4636364)	+	(CTCT)n	Simple_repeat	1	315	(0)	2256516
265	17.5	0.0	13.6	chr2	237557171	237557236	(4636293)	+	MLT2D	LTR/ERVL	503	559	(0)	2256515
1089	19.9	11.9	2.3	chr2	237789490	237789792	(4403737)	C	MLT1F1	LTR/ERVL-MaLR	(10)	559	224	2256842
39	3.9	3.8	0.0	chr2	237789793	237789845	(4403684)	+	(AG)n	Simple_repeat	1	55	(0)	2256843
356	22.6	28.9	0.6	chr2	237789857	237790028	(4403501)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	1	2256842
28	16.9	7.3	0.0	chr2	237892732	237892799	(4300730)	+	(CT)n	Simple_repeat	1	73	(0)	2257005
21	20.0	1.4	5.6	chr2	238240794	238240863	(3952666)	+	(CCCT)n	Simple_repeat	1	71	(0)	2257550
981	27.4	1.6	4.3	chr2	238516507	238516806	(3676723)	+	MLT1H1	LTR/ERVL-MaLR	3	292	(299)	2257923
46	0.0	0.0	0.0	chr2	238516807	238516845	(3676684)	+	(GA)n	Simple_repeat	1	39	(0)	2257924
467	28.9	7.8	4.8	chr2	238561205	238561587	(3631942)	C	L1ME3G	LINE/L1	(564)	360	1	2257960
934	8.1	0.0	0.0	chr2	238561590	238561700	(3631829)	+	AluSc	SINE/Alu	165	275	(34)	2257961
64	1.7	0.0	0.0	chr2	238561701	238561759	(3631770)	+	(TC)n	Simple_repeat	1	59	(0)	2257962
32	18.6	0.0	0.0	chr2	238561760	238561817	(3631712)	+	(AT)n	Simple_repeat	1	58	(0)	2257963
65	24.2	2.3	3.6	chr2	238694213	238694432	(3499097)	+	GA-rich	Low_complexity	1	225	(0)	2258126
79	12.7	1.5	0.8	chr2	238853349	238853480	(3340049)	+	(AG)n	Simple_repeat	1	134	(0)	2258318
247	12.1	0.0	0.0	chr2	241412141	241412173	(781356)	C	THE1B	LTR/ERVL-MaLR	(0)	355	323	2261119
1340	14.9	1.4	0.5	chr2	241412176	241412384	(781145)	C	THE1B	LTR/ERVL-MaLR	(153)	211	1	2261119
352	20.0	9.6	0.0	chr2	241412385	241412469	(781060)	+	L1MC4	LINE/L1	7809	7902	(140)	2261118
255	21.1	0.0	0.0	chr2	241412475	241412526	(781003)	+	L1MC4	LINE/L1	7990	8041	(1)	2261118
21	22.4	1.7	3.4	chr2	242034087	242034151	(159378)	+	(TC)n	Simple_repeat	1	63	(0)	2261992
357	33.9	4.8	2.2	chr2	242034169	242034349	(159180)	C	MIRc	SINE/MIR	(66)	202	17	2261993
4532	19.6	5.4	3.3	chr2	242049970	242051224	(142305)	+	L1MB7	LINE/L1	4686	5977	(700)	2262001
31	0.0	0.0	0.0	chr2	242051225	242051251	(142278)	+	(GA)n	Simple_repeat	1	27	(0)	2262003
2531	22.9	2.9	1.7	chr2	242051252	242051914	(141615)	+	L1MB7	LINE/L1	5978	6676	(6)	2262001
14	14.0	4.9	2.3	chr20	325566	325606	(64118561)	+	(GCGGCGGA)n	Simple_repeat	1	43	(0)	2262665
14	21.9	2.3	2.2	chr20	325829	325872	(64118295)	+	(GCC)n	Simple_repeat	1	45	(0)	2262666
2301	7.8	0.3	0.0	chr20	337568	337849	(64106318)	+	AluSp	SINE/Alu	1	283	(30)	2262696
18	4.5	0.0	0.0	chr20	337850	337872	(64106295)	+	(TC)n	Simple_repeat	1	23	(0)	2262697
13	21.3	0.0	0.0	chr20	337873	337882	(64106285)	+	(TCTA)n	Simple_repeat	1	33	(0)	2262698
4039	17.1	1.2	1.4	chr20	337904	338415	(64105752)	C	L1MB3	LINE/L1	(11)	6172	5664	2262699
34	7.3	0.0	0.0	chr20	343586	343628	(64100539)	+	(CT)n	Simple_repeat	1	43	(0)	2262716
13	18.4	5.7	3.6	chr20	462515	462567	(63981600)	+	(CCGCGGC)n	Simple_repeat	1	56	(0)	2262991
192	26.9	20.0	6.3	chr20	462725	462835	(63981332)	+	MIR	SINE/MIR	118	247	(15)	2262992
2141	10.5	2.7	1.0	chr20	526674	526967	(63917200)	+	AluSx3	SINE/Alu	1	299	(12)	2263118
73	4.1	0.0	0.0	chr20	526969	527044	(63917123)	+	(GA)n	Simple_repeat	1	76	(0)	2263119
534	18.3	14.5	0.7	chr20	527110	527252	(63916915)	+	L1M5	LINE/L1	3275	3440	(2706)	2263112
448	30.3	3.8	1.9	chr20	546306	546505	(63897662)	C	MIRb	SINE/MIR	(42)	226	19	2263146
1665	13.7	0.0	8.9	chr20	546507	546798	(63897369)	C	AluJr4	SINE/Alu	(26)	286	21	2263147
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
36	16.4	3.9	1.2	chr20	674322	674399	(63769768)	+	(CT)n	Simple_repeat	1	81	(0)	2263481
49	0.0	0.0	0.0	chr20	674400	674441	(63769726)	+	(CA)n	Simple_repeat	1	42	(0)	2263482
14	20.3	2.0	4.0	chr20	675602	675650	(63768517)	+	(GGCGCGG)n	Simple_repeat	1	50	(0)	2263484
13	29.1	0.0	3.5	chr20	675719	675776	(63768391)	+	(CGGCGG)n	Simple_repeat	1	58	(0)	2263485
13	27.3	3.4	1.6	chr20	728423	728481	(63715686)	+	(GGCGC)n	Simple_repeat	1	61	(0)	2263618
76	21.7	2.2	0.5	chr20	819239	819417	(63624750)	+	(TCTC)n	Simple_repeat	1	182	(0)	2263796
43	0.0	0.0	0.0	chr20	835165	835201	(63608966)	+	(TC)n	Simple_repeat	1	37	(0)	2263840
24	29.8	0.0	0.0	chr20	835202	835248	(63608919)	+	(AT)n	Simple_repeat	1	47	(0)	2263841
43	6.2	0.0	0.0	chr20	1818403	1818452	(62625715)	+	(TC)n	Simple_repeat	1	50	(0)	2265658
81	33.0	1.6	2.3	chr20	1818543	1818649	(62625518)	+	(TCTCTC)n	Simple_repeat	1	132	(0)	2265659
12	13.7	0.0	0.0	chr20	1818650	1818673	(62625494)	+	(TGTG)n	Simple_repeat	1	24	(0)	2265660
33	7.7	0.0	0.0	chr20	1818679	1818720	(62625447)	+	(TC)n	Simple_repeat	1	42	(0)	2265661
81	33.0	1.6	2.3	chr20	1818721	1818969	(62625198)	+	(TCTCTC)n	Simple_repeat	6	250	(0)	2265662
21	23.9	6.5	2.6	chr20	1895014	1895121	(62549046)	+	(GCTCCTC)n	Simple_repeat	1	115	(0)	2265848
27	29.1	5.4	0.0	chr20	1895074	1895185	(62548982)	+	(CT)n	Simple_repeat	1	118	(0)	2265849
286	29.2	6.7	2.8	chr20	2129270	2129411	(62314756)	+	MIRb	SINE/MIR	107	256	(6)	2266325
430	30.6	8.2	5.5	chr20	2129551	2129823	(62314344)	C	L2b	LINE/L2	(19)	3356	3076	2266326
7704	18.8	5.7	1.6	chr20	2244607	2246848	(62197319)	C	MER68-int	LTR/ERVL	(24)	2966	601	2266571
1789	26.5	11.1	2.0	chr20	2349069	2349264	(62094903)	+	MLT1G3	LTR/ERVL-MaLR	1	221	(374)	2266789
69	0.0	0.0	0.0	chr20	2349265	2349323	(62094844)	+	(CT)n	Simple_repeat	1	59	(0)	2266790
1789	26.5	11.1	2.0	chr20	2349324	2349666	(62094501)	+	MLT1G3	LTR/ERVL-MaLR	222	595	(0)	2266789
17	16.0	0.0	0.0	chr20	3470925	3470959	(60973208)	+	(CGCA)n	Simple_repeat	1	35	(0)	2268952
924	18.7	0.7	0.0	chr20	4107884	4108038	(60336129)	C	AluJo	SINE/Alu	(20)	292	137	2270144
20	12.2	0.0	0.0	chr20	4108047	4108089	(60336078)	+	(CTCTCT)n	Simple_repeat	1	43	(0)	2270145
2113	9.8	1.8	0.0	chr20	4108090	4108363	(60335804)	C	AluSz	SINE/Alu	(32)	280	2	2270146
15	19.6	3.5	5.0	chr20	4148767	4148824	(60295343)	+	(GCGGA)n	Simple_repeat	1	60	(0)	2270251
14	11.8	0.0	10.9	chr20	4148877	4148922	(60295245)	+	GA-rich	Low_complexity	1	46	(0)	2270252
351	34.6	0.0	3.1	chr20	4550071	4550211	(59893956)	+	MIR3	SINE/MIR	60	193	(15)	2270915
133	24.2	0.3	0.0	chr20	4550212	4550501	(59893666)	+	(CTCT)n	Simple_repeat	1	291	(0)	2270916
26	29.4	1.2	0.0	chr20	4823230	4823314	(59620853)	+	(GCGCCCT)n	Simple_repeat	1	86	(0)	2271387
18	13.7	2.4	2.3	chr20	4823488	4823529	(59620638)	+	(CCCT)n	Simple_repeat	1	43	(0)	2271388
12	22.8	4.8	0.0	chr20	4823639	4823680	(59620487)	+	(CCTCC)n	Simple_repeat	1	44	(0)	2271389
888	25.6	9.8	6.8	chr20	5817095	5817432	(58626735)	C	L1MEc	LINE/L1	(1460)	1292	678	2273361
48	0.0	0.0	0.0	chr20	5817433	5817473	(58626694)	+	(TG)n	Simple_repeat	1	41	(0)	2273363
275	9.1	0.0	0.0	chr20	5817474	5817506	(58626661)	C	AluYk11	SINE/Alu	(278)	33	1	2273364
888	27.3	10.4	13.6	chr20	5817507	5818048	(58626119)	C	L1MEc	LINE/L1	(5723)	677	100	2273361
60	15.5	0.0	0.0	chr20	5833616	5833722	(58610445)	+	GA-rich	Low_complexity	1	107	(0)	2273399
21	18.1	0.0	0.0	chr20	5833772	5833809	(58610358)	+	GA-rich	Low_complexity	1	38	(0)	2273399
150	8.0	2.3	0.0	chr20	8018261	8018528	(56425639)	+	(GA)n	Simple_repeat	1	274	(0)	2276652
43	0.0	0.0	0.0	chr20	8077832	8077868	(56366299)	+	(AG)n	Simple_repeat	1	37	(0)	2276738
1598	23.7	10.9	1.2	chr20	8130680	8131298	(56312869)	C	L1ME1	LINE/L1	(0)	6179	5501	2276796
40	9.8	1.5	0.0	chr20	8131310	8131374	(56312793)	+	(TC)n	Simple_repeat	1	66	(0)	2276797
416	14.1	0.0	0.0	chr20	8131393	8131463	(56312704)	C	L1M5	LINE/L1	(634)	5528	5458	2276798
51	14.0	1.1	1.1	chr20	9108856	9108944	(55335223)	+	GA-rich	Low_complexity	1	90	(0)	2278405
757	15.0	0.0	6.3	chr20	10029053	10029179	(54414988)	+	AluJr4	SINE/Alu	136	254	(58)	2279866
56	3.6	0.0	0.0	chr20	10029181	10029237	(54414930)	+	(AG)n	Simple_repeat	1	57	(0)	2279867
16	0.0	0.0	0.0	chr20	10029239	10029259	(54414908)	+	(GAAG)n	Simple_repeat	1	21	(0)	2279868
31	4.9	2.4	0.0	chr20	10271718	10271759	(54172408)	+	(GA)n	Simple_repeat	1	43	(0)	2280270
153	27.8	1.3	4.2	chr20	11275639	11276180	(53167987)	+	(TTCC)n	Simple_repeat	1	549	(0)	2281751
96	18.0	5.1	0.0	chr20	11338942	11339158	(53105009)	+	GA-rich	Low_complexity	1	228	(0)	2281851
713	25.4	3.6	1.8	chr20	11339159	11339375	(53104792)	C	MLT1F2	LTR/ERVL-MaLR	(339)	221	1	2281850
355	37.2	1.4	1.4	chr20	11816766	11816912	(52627255)	+	L2a	LINE/L2	2930	3076	(350)	2282528
53	0.0	0.0	0.0	chr20	11816925	11816969	(52627198)	+	(TC)n	Simple_repeat	1	45	(0)	2282529
846	28.5	17.6	3.9	chr20	11817055	11817463	(52626704)	C	LTR16C	LTR/ERVL	(8)	481	5	2282530
60	31.3	1.7	2.1	chr20	11849514	11849577	(52594590)	+	(TTCT)n	Simple_repeat	1	103	(0)	2282605
84	14.8	3.0	0.6	chr20	11849578	11849612	(52594555)	+	(TTCC)n	Simple_repeat	1	36	(0)	2282606
2063	18.6	1.5	5.0	chr20	11849613	11850088	(52594079)	+	MER65C	LTR/ERV1	1	459	(2)	2282607
773	21.8	18.7	3.1	chr20	11888759	11889113	(52555054)	C	LTR54	LTR/ERV1	(0)	510	76	2282679
20	6.5	3.0	0.0	chr20	11889121	11889153	(52555014)	+	(TGTT)n	Simple_repeat	1	34	(0)	2282680
1621	18.4	6.6	0.3	chr20	11889180	11889522	(52554645)	C	MLT2D	LTR/ERVL	(48)	366	1	2282681
1591	22.1	8.6	3.2	chr20	11934874	11935304	(52508863)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	2	2282725
65	1.5	1.5	1.4	chr20	11935357	11935424	(52508743)	+	(AG)n	Simple_repeat	1	69	(0)	2282726
166	24.6	2.1	0.0	chr20	13685611	13686054	(50758113)	+	GA-rich	Low_complexity	1	453	(0)	2285234
44	16.0	3.5	0.0	chr20	14198136	14198221	(50245946)	+	GA-rich	Low_complexity	1	89	(0)	2286076
253	23.7	7.3	0.0	chr20	15533502	15533529	(48910638)	C	MIR3	SINE/MIR	(37)	171	143	2288031
46	5.9	0.0	0.0	chr20	15533530	15533582	(48910585)	+	(TC)n	Simple_repeat	1	53	(0)	2288032
253	23.7	7.3	0.0	chr20	15533583	15533629	(48910538)	C	MIR3	SINE/MIR	(66)	142	91	2288031
601	27.9	3.5	2.6	chr20	16122943	16123137	(48321030)	+	LTR84a	LTR/ERVL	179	375	(382)	2288898
97	10.7	1.3	1.3	chr20	16123141	16123295	(48320872)	+	(GA)n	Simple_repeat	1	157	(0)	2288899
16	8.9	0.0	3.9	chr20	17226500	17226520	(47217647)	+	(TG)n	Simple_repeat	1	21	(0)	2290530
36	2.9	0.0	0.0	chr20	17226521	17226555	(47217612)	+	(GA)n	Simple_repeat	1	35	(0)	2290531
184	19.4	4.4	1.1	chr20	17433826	17434280	(47009887)	+	(TC)n	Simple_repeat	1	475	(0)	2290858
13	16.5	0.0	0.0	chr20	18611841	18611867	(45832300)	+	(TTA)n	Simple_repeat	1	27	(0)	2292974
1235	9.6	0.0	0.0	chr20	18611868	18612023	(45832144)	C	AluSg4	SINE/Alu	(25)	285	130	2292975
1593	17.8	2.5	2.5	chr20	18773745	18774030	(45670137)	+	AluJb	SINE/Alu	1	286	(26)	2293203
338	16.0	0.0	0.0	chr20	18774040	18774089	(45670078)	+	AluJo	SINE/Alu	253	302	(10)	2293204
22211	13.1	2.8	4.7	chr20	18774090	18776363	(45667804)	C	L1MA3	LINE/L1	(5214)	2343	72	2293202
51	0.0	0.0	0.0	chr20	18790626	18790669	(45653498)	+	(GA)n	Simple_repeat	1	44	(0)	2293229
2615	13.5	3.0	0.2	chr20	18818769	18819184	(45624983)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2293287
848	19.6	3.8	5.4	chr20	18819185	18819229	(45624938)	+	MLT1A	LTR/ERVL-MaLR	140	187	(187)	2293286
73	5.3	1.9	1.9	chr20	18819230	18819332	(45624835)	+	(TCTT)n	Simple_repeat	1	105	(0)	2293288
720	23.4	10.2	3.2	chr20	18819333	18819564	(45624603)	+	MLT1A	LTR/ERVL-MaLR	162	396	(12)	2293286
901	28.4	11.3	5.9	chr20	19077588	19078338	(45365829)	C	L2a	LINE/L2	(6)	3420	2602	2293636
49	0.0	0.0	0.0	chr20	19078339	19078380	(45365787)	+	(TG)n	Simple_repeat	1	42	(0)	2293637
618	27.7	15.6	8.5	chr20	19078381	19078731	(45365436)	C	L2a	LINE/L2	(818)	2601	2235	2293636
1353	25.9	9.3	1.6	chr20	19712702	19713216	(44730951)	+	L1ME2z	LINE/L1	5699	6256	(188)	2294520
187	20.0	0.0	4.8	chr20	21125660	21125701	(43318466)	+	MIRb	SINE/MIR	213	252	(16)	2296641
308	22.1	4.7	12.2	chr20	21508226	21508364	(42935803)	+	L1MEd	LINE/L1	1006	1133	(5953)	2297196
79	4.7	1.6	4.0	chr20	21537620	21537741	(42906426)	+	(TCTT)n	Simple_repeat	1	124	(0)	2297225
53	13.6	0.0	3.7	chr20	21537742	21537762	(42906405)	+	(TCTCC)n	Simple_repeat	1	18	(0)	2297226
1008	19.4	0.6	0.0	chr20	21537763	21537932	(42906235)	C	AluJr	SINE/Alu	(19)	293	123	2297227
497	26.0	8.3	6.7	chr20	21537934	21538230	(42905937)	C	L1MC4	LINE/L1	(1364)	6518	6217	2297223
1736	19.5	8.8	1.6	chr20	21806447	21806499	(42637668)	C	MLT2D	LTR/ERVL	(2)	412	358	2297620
50	2.2	0.0	0.0	chr20	21806500	21806546	(42637621)	+	(AG)n	Simple_repeat	1	47	(0)	2297621
1736	19.5	8.8	1.6	chr20	21806547	21806872	(42637295)	C	MLT2D	LTR/ERVL	(57)	357	3	2297620
576	29.8	3.6	0.0	chr20	22381265	22381502	(42062665)	C	Charlie23a	DNA/hAT-Charlie	(50)	289	43	2298338
38	2.8	0.0	0.0	chr20	22381548	22381584	(42062583)	+	(TC)n	Simple_repeat	1	37	(0)	2298339
125	13.6	1.5	0.0	chr20	22513109	22513314	(41930853)	+	(CT)n	Simple_repeat	1	209	(0)	2298512
18	12.3	3.1	9.1	chr20	22584365	22584428	(41859739)	+	(CCCT)n	Simple_repeat	1	66	(0)	2298601
12	21.2	6.2	4.3	chr20	22584428	22584492	(41859675)	+	G-rich	Low_complexity	1	69	(0)	2298602
54	6.8	1.3	1.2	chr20	23303333	23303411	(41140756)	+	(CTCT)n	Simple_repeat	1	80	(0)	2299518
489	23.2	17.0	0.9	chr20	23303429	23303650	(41140517)	+	LTR16B1	LTR/ERVL	76	340	(140)	2299519
374	31.2	0.8	0.0	chr20	23325108	23325235	(41118932)	C	MER5B	DNA/hAT-Charlie	(32)	146	18	2299550
1091	26.3	7.7	8.1	chr20	23325348	23325510	(41118657)	+	L1ME2	LINE/L1	5500	5663	(501)	2299551
13	15.4	0.0	3.2	chr20	23362090	23362120	(41082047)	+	G-rich	Low_complexity	1	31	(0)	2299614
12	23.8	2.2	2.1	chr20	23362245	23362290	(41081877)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2299615
1566	13.3	15.9	0.4	chr20	23385478	23385732	(41058435)	+	AluSz6	SINE/Alu	1	302	(10)	2299637
7334	21.5	9.7	10.5	chr20	23385733	23386573	(41057594)	+	L1MB7	LINE/L1	2968	3930	(2607)	2299630
1587	12.0	11.7	4.0	chr20	23405021	23405296	(41038871)	+	AluSx	SINE/Alu	1	300	(12)	2299667
1279	22.0	10.6	13.1	chr20	23405297	23405439	(41038728)	+	L1MB8	LINE/L1	5675	5779	(399)	2299666
36357	7.6	1.0	3.7	chr20	23736389	23741266	(40702901)	+	HERV9N-int	LTR/ERV1	1	4747	(627)	2300068
62	9.6	0.0	0.0	chr20	24778413	24778503	(39665664)	+	(GAGA)n	Simple_repeat	1	91	(0)	2301328
14	15.4	5.6	0.0	chr20	25057940	25057975	(39386192)	+	(GCT)n	Simple_repeat	1	38	(0)	2301646
2289	20.5	8.3	8.7	chr20	25252388	25253129	(39191038)	C	MER21C	LTR/ERVL	(97)	841	1	2301902
753	18.6	7.6	2.7	chr20	25253154	25253341	(39190826)	+	MLT2D	LTR/ERVL	217	414	(0)	2301903
15073	16.3	2.5	3.5	chr20	25649986	25650669	(38793498)	C	L1MA4	LINE/L1	(1015)	6547	5860	2302540
43	2.5	0.0	0.0	chr20	25650676	25650716	(38793451)	+	(TC)n	Simple_repeat	1	41	(0)	2302542
2204	10.1	0.3	5.9	chr20	25650717	25651016	(38793151)	C	AluSx3	SINE/Alu	(27)	284	1	2302543
446	25.8	0.4	0.0	chr20	29304883	29305974	(35138193)	+	GA-rich	Low_complexity	1	1096	(0)	2303959
532	22.8	0.5	0.2	chr20	29307771	29308553	(35135614)	+	GA-rich	Low_complexity	1	786	(0)	2303966
532	22.8	0.5	0.2	chr20	29308853	29309256	(35134911)	+	GA-rich	Low_complexity	787	1190	(0)	2303968
261	19.7	2.0	6.3	chr20	29309274	29309479	(35134688)	+	HERVIP10FH-int	LTR/ERV1	782	978	(4124)	2303960
431	25.0	0.8	0.3	chr20	29751329	29752391	(34691776)	+	GA-rich	Low_complexity	1	1071	(0)	2304501
15	23.0	0.0	0.0	chr20	29752475	29752511	(34691656)	+	(AAC)n	Simple_repeat	1	37	(0)	2304502
678	23.5	0.4	0.2	chr20	29755374	29756046	(34688121)	+	GA-rich	Low_complexity	865	1538	(0)	2304508
396	25.2	0.3	0.3	chr20	30498135	30499097	(33945070)	+	GA-rich	Low_complexity	1	966	(0)	2305055
264	22.3	0.8	4.1	chr20	30499099	30499341	(33944826)	+	HERVIP10FH-int	LTR/ERV1	782	1016	(4086)	2305056
61	13.9	4.2	0.8	chr20	30499345	30499464	(33944703)	+	GA-rich	Low_complexity	1	125	(0)	2305057
447	15.8	2.1	9.5	chr20	30501134	30501238	(33942929)	C	MER39B	LTR/ERV1	(242)	411	315	2305061
265	27.6	3.3	9.4	chr20	30501149	30501276	(33942891)	C	MER21A	LTR/ERVL	(620)	311	192	2305062
1257	25.2	0.7	0.3	chr20	30501277	30501914	(33942253)	+	GA-rich	Low_complexity	1	641	(0)	2305063
1257	25.2	0.7	0.3	chr20	30502161	30504618	(33939549)	+	GA-rich	Low_complexity	642	3106	(0)	2305065
212	22.9	0.8	0.4	chr20	30910056	30910545	(33533622)	+	(TCTC)n	Simple_repeat	1	494	(0)	2305597
319	18.1	5.1	4.7	chr20	30910855	30911069	(33533098)	C	HERVIP10FH-int	LTR/ERV1	(4105)	997	782	2305599
276	16.7	1.4	4.0	chr20	30913503	30913652	(33530515)	C	HERVIP10FH-int	LTR/ERV1	(7779)	847	702	2305599
294	26.2	0.5	0.0	chr20	30913653	30914394	(33529773)	+	(CTCT)n	Simple_repeat	1	746	(0)	2305605
502	23.0	6.7	3.9	chr20	31486139	31486345	(32957822)	C	L2a	LINE/L2	(1)	3425	3171	2306072
260	23.0	3.3	11.2	chr20	31486293	31486390	(32957777)	C	MIR3	SINE/MIR	(0)	208	119	2306073
80	1.4	0.0	0.0	chr20	31486393	31486465	(32957702)	+	(GA)n	Simple_repeat	1	73	(0)	2306074
17	0.0	0.0	0.0	chr20	31518867	31518885	(32925282)	+	(AG)n	Simple_repeat	1	19	(0)	2306163
721	23.1	7.1	0.0	chr20	31518914	31519095	(32925072)	C	L1ME4b	LINE/L1	(17)	875	680	2306164
2235	12.2	0.3	0.0	chr20	31519098	31519400	(32924767)	C	AluSx1	SINE/Alu	(8)	304	1	2306165
182	12.5	16.9	7.2	chr20	31604743	31604811	(32839356)	+	L3	LINE/CR1	2481	2557	(1542)	2306390
229	26.0	5.2	1.4	chr20	31604877	31604950	(32839217)	+	MIR3	SINE/MIR	78	154	(54)	2306391
46	0.0	2.3	0.0	chr20	31846443	31846485	(32597682)	+	(AG)n	Simple_repeat	1	44	(0)	2307004
518	32.1	12.4	0.0	chr20	32561649	32561838	(31882329)	+	MIRb	SINE/MIR	5	221	(47)	2308680
460	24.0	9.3	2.4	chr20	32743631	32743826	(31700341)	+	MIRb	SINE/MIR	46	267	(1)	2309172
12	24.6	0.0	2.5	chr20	32762485	32762524	(31681643)	+	G-rich	Low_complexity	1	40	(0)	2309236
483	27.2	1.9	4.7	chr20	33262165	33262376	(31181791)	+	MER113	DNA/hAT-Charlie	29	234	(287)	2310289
43	4.0	0.0	0.0	chr20	33262378	33262429	(31181738)	+	(AG)n	Simple_repeat	1	52	(0)	2310290
443	29.7	6.3	2.0	chr20	33262452	33262695	(31181472)	+	MER113	DNA/hAT-Charlie	263	517	(4)	2310291
2092	11.0	1.9	7.0	chr20	33295324	33295651	(31148516)	+	AluSx1	SINE/Alu	1	311	(1)	2310360
143	16.1	3.7	3.6	chr20	33295652	33296000	(31148167)	+	GA-rich	Low_complexity	1	362	(0)	2310361
553	21.7	13.2	4.4	chr20	33296034	33296192	(31147975)	C	MER5B	DNA/hAT-Charlie	(3)	175	1	2310362
1989	9.6	0.4	0.0	chr20	33464612	33464881	(30979286)	+	AluSc8	SINE/Alu	2	272	(39)	2310805
48	14.8	1.2	0.0	chr20	33464882	33464963	(30979204)	+	GA-rich	Low_complexity	1	83	(0)	2310806
57	1.8	0.0	0.0	chr20	33464964	33465019	(30979148)	+	(AGGA)n	Simple_repeat	1	56	(0)	2310807
370	28.6	14.8	1.4	chr20	33465053	33465268	(30978899)	C	MIRb	SINE/MIR	(18)	250	1	2310808
17	18.9	2.5	2.4	chr20	33562324	33562385	(30881782)	+	GA-rich	Low_complexity	1	62	(0)	2311081
17	27.1	2.9	1.4	chr20	33674429	33674497	(30769670)	+	(GCCGCC)n	Simple_repeat	1	71	(0)	2311314
311	30.9	11.3	0.0	chr20	33674701	33674826	(30769341)	+	MIR	SINE/MIR	102	243	(19)	2311315
619	25.7	7.2	0.0	chr20	33759587	33759757	(30684410)	+	MER113	DNA/hAT-Charlie	44	229	(292)	2311527
43	4.5	0.0	0.0	chr20	33759758	33759803	(30684364)	+	(GA)n	Simple_repeat	1	46	(0)	2311528
619	25.7	7.2	0.0	chr20	33759804	33759849	(30684318)	+	MER113	DNA/hAT-Charlie	230	277	(244)	2311527
916	20.6	7.0	3.4	chr20	33759851	33760056	(30684111)	C	MER20	DNA/hAT-Charlie	(0)	219	6	2311529
205	19.6	3.8	3.8	chr20	33887181	33887233	(30556934)	C	MIRb	SINE/MIR	(93)	175	123	2311831
611	21.9	0.8	0.0	chr20	33887236	33887358	(30556809)	+	AluJb	SINE/Alu	159	282	(30)	2311832
35	0.0	0.0	0.0	chr20	33887359	33887396	(30556771)	+	(TC)n	Simple_repeat	1	38	(0)	2311833
62	0.0	0.0	0.0	chr20	33887397	33887449	(30556718)	+	(TA)n	Simple_repeat	1	53	(0)	2311834
15	32.0	3.4	2.2	chr20	33993917	33994005	(30450162)	+	(GCG)n	Simple_repeat	1	92	(0)	2312095
2212	11.5	0.0	2.0	chr20	34149798	34150101	(30294066)	C	AluSx	SINE/Alu	(14)	298	1	2312405
25	14.0	0.0	0.0	chr20	34150129	34150168	(30293999)	+	(GA)n	Simple_repeat	1	40	(0)	2312406
472	25.2	1.6	0.0	chr20	34150180	34150306	(30293861)	C	L1MEd	LINE/L1	(6952)	134	6	2312404
1767	15.3	5.7	0.4	chr20	34696216	34696496	(29747671)	+	AluJr	SINE/Alu	1	297	(15)	2313650
763	15.9	0.0	0.0	chr20	34696502	34696608	(29747559)	+	AluJo	SINE/Alu	1	107	(205)	2313651
57	10.8	0.0	0.0	chr20	34696609	34696690	(29747477)	+	(GA)n	Simple_repeat	1	82	(0)	2313652
819	16.1	0.0	2.9	chr20	34696718	34696854	(29747313)	C	AluJr4	SINE/Alu	(166)	146	14	2313653
19	0.0	4.2	0.0	chr20	35539644	35539667	(28904500)	+	(TA)n	Simple_repeat	1	25	(0)	2315515
1303	13.7	2.8	12.5	chr20	35539685	35539744	(28904423)	C	AluJr4	SINE/Alu	(30)	282	224	2315516
2255	10.7	10.8	8.3	chr20	35539745	35540213	(28903954)	+	MER51E	LTR/ERV1	1	482	(0)	2315517
8329	3.5	3.3	0.0	chr20	35686723	35687401	(28756766)	+	LTR13	LTR/ERVK	1	709	(298)	2315817
40	0.0	2.6	0.0	chr20	35687402	35687439	(28756728)	+	(TC)n	Simple_repeat	1	39	(0)	2315818
8329	3.5	3.3	0.0	chr20	35687440	35687733	(28756434)	+	LTR13	LTR/ERVK	710	1006	(1)	2315817
216	33.7	16.4	1.9	chr20	35771389	35771706	(28672461)	C	L2	LINE/L2	(358)	3061	2689	2316008
491	27.1	7.1	3.1	chr20	36130444	36130706	(28313461)	C	L1ME4c	LINE/L1	(308)	522	315	2316917
34	0.0	0.0	0.0	chr20	36130788	36130816	(28313351)	+	(TC)n	Simple_repeat	1	29	(0)	2316918
2096	10.5	0.3	1.4	chr20	36130817	36130975	(28313192)	C	AluSq	SINE/Alu	(20)	293	137	2316919
17	7.3	0.0	3.2	chr20	36154793	36154823	(28289344)	+	(CCCGC)n	Simple_repeat	1	31	(0)	2316977
52	3.6	1.8	0.0	chr20	36232812	36232868	(28211299)	+	(CT)n	Simple_repeat	1	58	(0)	2317148
1087	14.2	0.0	0.0	chr20	36380439	36380586	(28063581)	+	AluJr4	SINE/Alu	134	281	(31)	2317478
83	0.0	0.0	0.0	chr20	36380594	36380664	(28063503)	+	(AG)n	Simple_repeat	1	71	(0)	2317479
525	27.9	9.1	10.0	chr20	36380676	36381037	(28063130)	C	MLT1J	LTR/ERVL-MaLR	(105)	407	15	2317480
352	32.1	3.0	2.2	chr20	36467789	36467922	(27976245)	C	MIRb	SINE/MIR	(14)	254	120	2317700
50	2.2	0.0	0.0	chr20	36810707	36810753	(27633414)	+	(TC)n	Simple_repeat	1	47	(0)	2318500
1685	14.0	0.0	0.8	chr20	36810779	36811021	(27633146)	C	AluSz6	SINE/Alu	(71)	241	1	2318501
1863	21.5	11.4	8.1	chr20	36866487	36867042	(27577125)	+	MLT1G1	LTR/ERVL-MaLR	1	577	(2)	2318646
255	32.4	1.8	2.6	chr20	37289861	37289974	(27154193)	C	MIR3	SINE/MIR	(77)	131	19	2319673
372	24.5	1.9	9.7	chr20	37433807	37433982	(27010185)	C	L1ME3G	LINE/L1	(0)	924	763	2320030
51	0.0	0.0	0.0	chr20	37433995	37434038	(27010129)	+	(TC)n	Simple_repeat	1	44	(0)	2320031
1072	24.5	0.7	0.5	chr20	37434073	37434377	(27009790)	+	L1MD	LINE/L1	4056	4365	(1781)	2320032
444	9.3	0.0	0.0	chr20	37677354	37677407	(26766760)	+	AluSz6	SINE/Alu	226	279	(33)	2320558
51	0.0	0.0	0.0	chr20	37677408	37677451	(26766716)	+	(GA)n	Simple_repeat	1	44	(0)	2320559
1698	21.2	2.9	5.8	chr20	37677460	37677890	(26766277)	+	MLT1C	LTR/ERVL-MaLR	43	460	(7)	2320560
329	19.7	7.0	0.0	chr20	37756264	37756329	(26687838)	C	MIR3	SINE/MIR	(43)	165	95	2320725
21	7.5	0.0	0.0	chr20	37756395	37756422	(26687745)	+	(TC)n	Simple_repeat	1	28	(0)	2320726
35	5.3	0.0	0.0	chr20	37756446	37756484	(26687683)	+	(GT)n	Simple_repeat	1	39	(0)	2320727
19	19.0	0.0	3.9	chr20	37756567	37756629	(26687538)	+	(TTTCT)n	Simple_repeat	1	60	(0)	2320728
48	24.4	0.7	2.9	chr20	37912801	37912937	(26531230)	+	(CT)n	Simple_repeat	1	138	(0)	2321040
7589	14.7	6.4	8.7	chr20	38029007	38029691	(26414476)	+	L1MDa	LINE/L1	3077	3734	(2803)	2321277
2142	12.5	17.5	0.3	chr20	38029692	38030045	(26414122)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2321284
1881	16.8	0.4	0.0	chr20	38275161	38275440	(26168727)	+	AluJb	SINE/Alu	1	281	(31)	2321797
43	2.5	0.0	0.0	chr20	38275442	38275482	(26168685)	+	(AG)n	Simple_repeat	1	41	(0)	2321798
2042	18.3	4.8	7.2	chr20	38275483	38275674	(26168493)	+	L1MC3	LINE/L1	6785	6953	(832)	2321796
732	20.6	28.0	2.5	chr20	38392426	38392588	(26051579)	+	MLT1J1	LTR/ERVL-MaLR	1	203	(241)	2322085
51	8.1	0.0	0.0	chr20	38392589	38392654	(26051513)	+	(TC)n	Simple_repeat	1	66	(0)	2322086
732	24.4	5.8	6.1	chr20	38392655	38392895	(26051272)	+	MLT1J1	LTR/ERVL-MaLR	204	443	(1)	2322085
40	16.2	3.6	5.2	chr20	38564829	38564940	(25879227)	+	(TCT)n	Simple_repeat	1	116	(0)	2322396
75	16.8	2.0	0.7	chr20	38656383	38656530	(25787637)	+	(CTCT)n	Simple_repeat	1	151	(0)	2322573
1187	22.4	2.7	16.4	chr20	38717972	38718403	(25725764)	C	MLT1A	LTR/ERVL-MaLR	(3)	371	1	2322730
2410	20.9	4.3	2.9	chr20	39068187	39068734	(25375433)	C	MLT1F2	LTR/ERVL-MaLR	(4)	556	1	2323433
425	24.1	15.1	5.9	chr20	40238747	40239074	(24205093)	C	MLT1H1	LTR/ERVL-MaLR	(10)	538	184	2325421
66	22.5	0.0	0.0	chr20	40239093	40239230	(24204937)	+	(TCTC)n	Simple_repeat	1	138	(0)	2325422
2164	12.7	4.6	0.0	chr20	40239231	40239522	(24204645)	C	AluSc	SINE/Alu	(3)	306	1	2325423
84	25.4	3.4	1.8	chr20	40813800	40814068	(23630099)	+	(CT)n	Simple_repeat	1	278	(0)	2326486
890	28.4	6.1	6.9	chr20	41675543	41676007	(22768160)	+	L1ME3F	LINE/L1	5732	6192	(51)	2327902
39	6.7	0.0	0.0	chr20	41676010	41676056	(22768111)	+	(TC)n	Simple_repeat	1	47	(0)	2327903
18	0.0	0.0	0.0	chr20	41676059	41676078	(22768089)	+	(CA)n	Simple_repeat	1	20	(0)	2327904
72	10.1	1.7	0.0	chr20	43091421	43091538	(21352629)	+	(TC)n	Simple_repeat	1	120	(0)	2330421
1064	28.2	7.6	7.2	chr20	43091539	43091722	(21352445)	+	HAL1ME	LINE/L1	1649	1823	(642)	2330418
226	24.9	4.5	0.8	chr20	43095553	43096246	(21347921)	+	(CT)n	Simple_repeat	1	725	(0)	2330429
109	12.7	0.6	0.6	chr20	43448343	43448520	(20995647)	+	(AGGG)n	Simple_repeat	1	179	(0)	2331189
97	21.8	0.0	0.0	chr20	43448521	43448541	(20995626)	+	GA-rich	Low_complexity	1	199	(0)	2331190
1051	10.0	9.9	3.5	chr20	43448544	43448740	(20995427)	C	THE1D	LTR/ERVL-MaLR	(170)	211	1	2331188
16	26.6	2.0	1.9	chr20	43458260	43458310	(20985857)	+	(GC)n	Simple_repeat	1	52	(0)	2331218
16	31.1	0.0	0.0	chr20	43460998	43461056	(20983111)	+	(TCAAGG)n	Simple_repeat	1	59	(0)	2331221
21	0.0	0.0	0.0	chr20	43652451	43652473	(20791694)	+	(TA)n	Simple_repeat	1	23	(0)	2331646
33	0.0	0.0	0.0	chr20	43652474	43652501	(20791666)	+	(AG)n	Simple_repeat	1	28	(0)	2331647
37	0.0	0.0	0.0	chr20	43934137	43934168	(20509999)	+	(GA)n	Simple_repeat	1	32	(0)	2332290
246	29.2	3.0	1.0	chr20	43934206	43934302	(20509865)	C	L2b	LINE/L2	(208)	3167	3069	2332291
380	27.6	1.0	3.0	chr20	44015826	44015926	(20428241)	+	MER131	DNA?	22	120	(95)	2332468
259	30.8	0.9	4.5	chr20	44234979	44235090	(20209077)	+	MIRc	SINE/MIR	2	109	(159)	2332978
38	21.6	2.2	0.0	chr20	44235098	44235189	(20208978)	+	(TCTC)n	Simple_repeat	1	94	(0)	2332979
2322	9.5	0.3	0.0	chr20	44235190	44235483	(20208684)	C	AluSq2	SINE/Alu	(18)	295	1	2332980
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
1846	19.7	11.6	3.0	chr20	44722336	44722455	(19721712)	+	L2	LINE/L2	2451	2581	(838)	2334182
2175	12.9	0.3	2.2	chr20	44722456	44722773	(19721394)	C	AluSz	SINE/Alu	(0)	312	1	2334183
246	28.2	16.4	0.0	chr20	44732561	44732639	(19711528)	C	MIRb	SINE/MIR	(56)	212	118	2334209
54	15.0	4.4	0.8	chr20	44732705	44732817	(19711350)	+	(CT)n	Simple_repeat	1	118	(0)	2334211
657	21.1	6.3	2.8	chr20	44732849	44732887	(19711280)	C	L1ME3A	LINE/L1	(0)	6173	6132	2334212
2097	13.6	1.0	0.3	chr20	44732888	44733197	(19710970)	+	AluJb	SINE/Alu	1	312	(0)	2334213
15	18.4	3.8	8.4	chr20	45254072	45254151	(19190016)	+	(AGAAGC)n	Simple_repeat	1	83	(0)	2335234
43	0.0	0.0	0.0	chr20	45254199	45254235	(19189932)	+	(GA)n	Simple_repeat	1	37	(0)	2335235
16	16.3	0.0	8.8	chr20	45406547	45406603	(19037564)	+	(CCCGCCT)n	Simple_repeat	1	57	(0)	2335583
13	32.3	1.6	0.0	chr20	45935022	45935085	(18509082)	+	(CCTCCG)n	Simple_repeat	1	65	(0)	2336592
428	20.4	1.8	8.4	chr20	46111482	46111607	(18332560)	C	MLT1F1	LTR/ERVL-MaLR	(265)	304	181	2336949
176	8.9	8.5	0.0	chr20	46111613	46111941	(18332226)	+	GA-rich	Low_complexity	1	357	(0)	2336951
566	25.0	7.7	9.3	chr20	46111917	46111976	(18332191)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	167	2336949
18	29.9	1.4	0.0	chr20	46308362	46308426	(18135741)	+	G-rich	Low_complexity	1	66	(0)	2337418
36	6.7	0.0	0.0	chr20	46308427	46308473	(18135694)	+	(GAGCGAGA)n	Simple_repeat	1	47	(0)	2337419
54	5.2	0.0	0.0	chr20	46626098	46626157	(17818010)	+	(TC)n	Simple_repeat	1	60	(0)	2338066
76	21.6	5.3	0.0	chr20	46626164	46626369	(17817798)	+	(TCTC)n	Simple_repeat	1	217	(0)	2338067
2067	11.7	0.0	0.0	chr20	46987651	46987916	(17456251)	+	AluSz6	SINE/Alu	7	272	(40)	2338939
57	0.0	0.0	0.0	chr20	46987917	46987965	(17456202)	+	(TC)n	Simple_repeat	1	49	(0)	2338940
12	13.9	0.0	0.0	chr20	47359222	47359245	(17084922)	+	(CCTC)n	Simple_repeat	1	24	(0)	2339810
2200	13.7	0.0	0.0	chr20	47372285	47372583	(17071584)	+	AluSx1	SINE/Alu	2	300	(12)	2339851
53	2.0	0.0	0.0	chr20	47372668	47372717	(17071450)	+	(TC)n	Simple_repeat	1	50	(0)	2339852
15	12.0	3.3	3.2	chr20	47493526	47493555	(16950612)	+	(TC)n	Simple_repeat	1	31	(0)	2340264
2471	21.4	9.8	11.8	chr20	47520090	47521294	(16922873)	C	HERVIP10FH-int	LTR/ERV1	(3924)	1178	1	2340335
1136	17.8	3.2	0.9	chr20	47989886	47990095	(16454072)	C	MER20	DNA/hAT-Charlie	(3)	216	2	2341248
109	14.9	0.8	4.2	chr20	48000592	48000809	(16443358)	+	(CTTT)n	Simple_repeat	4	213	(0)	2341266
276	18.6	1.7	6.3	chr20	48000812	48000822	(16443345)	+	MSTA	LTR/ERVL-MaLR	296	306	(49)	2341267
2140	11.3	1.4	0.3	chr20	48000823	48001115	(16443052)	C	AluSp	SINE/Alu	(12)	301	6	2341268
699	30.9	13.4	0.8	chr20	48195672	48196114	(16248053)	+	L2a	LINE/L2	2643	3150	(276)	2341637
1936	20.2	6.0	2.5	chr20	48196117	48196173	(16247994)	C	MLT2C2	LTR/ERVL	(0)	464	405	2341635
35	0.0	0.0	0.0	chr20	48196174	48196203	(16247964)	+	(GA)n	Simple_repeat	1	30	(0)	2341638
1936	20.2	6.0	2.5	chr20	48196204	48196397	(16247770)	C	MLT2C2	LTR/ERVL	(60)	404	196	2341635
22	3.9	0.0	0.0	chr20	48275707	48275733	(16168434)	+	(AG)n	Simple_repeat	1	27	(0)	2341797
301	22.8	6.3	13.2	chr20	48902636	48902908	(15541259)	C	Charlie18a	DNA/hAT-Charlie	(0)	342	90	2343161
32	2.7	0.0	0.0	chr20	48903009	48903046	(15541121)	+	(GA)n	Simple_repeat	1	38	(0)	2343162
43	0.0	0.0	0.0	chr20	48903047	48903083	(15541084)	+	(GT)n	Simple_repeat	1	37	(0)	2343163
2201	16.1	15.6	1.1	chr20	49281111	49281576	(15162591)	C	LTR10B1	LTR/ERV1	(0)	547	2	2344009
8110	25.2	5.5	3.3	chr20	49281578	49282133	(15162034)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	7026	2344009
2219	11.4	2.6	0.0	chr20	49361446	49361744	(15082423)	+	AluSx1	SINE/Alu	1	307	(5)	2344237
43	11.4	0.0	0.0	chr20	49361745	49361812	(15082355)	+	(GAGA)n	Simple_repeat	1	68	(0)	2344238
311	23.1	9.7	1.5	chr20	49361833	49361964	(15082203)	+	Charlie18a	DNA/hAT-Charlie	131	274	(68)	2344239
3202	20.9	9.4	7.2	chr20	49551848	49552497	(14891670)	+	MER4-int	LTR/ERV1	602	1823	(4775)	2344724
36	10.1	0.0	0.0	chr20	49552498	49552550	(14891617)	+	(TC)n	Simple_repeat	1	53	(0)	2344728
4295	16.2	6.9	5.5	chr20	49552551	49554354	(14889813)	+	MER4-int	LTR/ERV1	1407	3715	(2883)	2344724
17	4.5	0.0	0.0	chr20	49831382	49831402	(14612765)	+	(AC)n	Simple_repeat	1	21	(0)	2345450
47	2.3	0.0	0.0	chr20	49831403	49831447	(14612720)	+	(CT)n	Simple_repeat	1	45	(0)	2345451
1349	10.6	0.0	0.0	chr20	49833968	49834137	(14610030)	+	AluSx	SINE/Alu	2	171	(141)	2345455
55	0.0	0.0	0.0	chr20	49834140	49834186	(14609981)	+	(TC)n	Simple_repeat	1	47	(0)	2345456
143	18.1	0.3	5.5	chr20	49834187	49834528	(14609639)	+	(AT)n	Simple_repeat	1	343	(0)	2345457
276	31.1	10.8	1.3	chr20	50016559	50016708	(14427459)	+	MIRb	SINE/MIR	80	245	(23)	2345859
202	20.0	0.0	2.4	chr20	50016674	50016714	(14427453)	+	L2c	LINE/L2	3337	3376	(11)	2345860
33	5.6	0.0	0.0	chr20	50016718	50016754	(14427413)	+	(TC)n	Simple_repeat	1	37	(0)	2345861
1204	14.7	0.0	0.0	chr20	50016755	50016924	(14427243)	C	AluJb	SINE/Alu	(10)	302	133	2345862
14	22.7	1.8	5.2	chr20	50113046	50113102	(14331065)	+	(CCCCGG)n	Simple_repeat	1	58	(0)	2346105
202	27.8	8.4	1.2	chr20	50187880	50187963	(14256204)	+	MIR3	SINE/MIR	75	167	(101)	2346318
1383	18.5	5.8	2.3	chr20	50554113	50554377	(13889790)	+	AluJr	SINE/Alu	1	275	(37)	2347204
33	0.0	0.0	0.0	chr20	50554381	50554408	(13889759)	+	(TC)n	Simple_repeat	1	28	(0)	2347205
1573	21.0	12.5	1.4	chr20	50554417	50555351	(13888816)	+	L1MEc	LINE/L1	1699	2468	(3932)	2347203
44	11.0	0.0	0.0	chr20	50630541	50630609	(13813558)	+	(CT)n	Simple_repeat	1	69	(0)	2347324
38	0.0	0.0	0.0	chr20	50767319	50767351	(13676816)	+	(TC)n	Simple_repeat	1	33	(0)	2347669
30	3.4	0.0	0.0	chr20	50767384	50767413	(13676754)	+	(CA)n	Simple_repeat	1	30	(0)	2347670
487	26.5	5.7	0.7	chr20	50767451	50767628	(13676539)	+	L1ME3Cz	LINE/L1	6	173	(824)	2347671
2045	12.6	1.0	1.0	chr20	50786980	50787289	(13656878)	+	AluSx	SINE/Alu	1	310	(2)	2347731
64	30.0	3.5	2.0	chr20	50787296	50787458	(13656709)	+	GA-rich	Low_complexity	1	165	(0)	2347732
1680	14.3	3.2	0.4	chr20	50787459	50787730	(13656437)	+	AluJb	SINE/Alu	1	280	(32)	2347733
27	7.9	2.5	0.0	chr20	50818433	50818472	(13625695)	+	(CT)n	Simple_repeat	1	41	(0)	2347820
75	14.3	4.7	0.6	chr20	51001990	51002139	(13442028)	+	GA-rich	Low_complexity	1	157	(0)	2348193
714	17.6	6.1	7.7	chr20	51002216	51002397	(13441770)	C	AluJb	SINE/Alu	(0)	312	134	2348194
19	11.2	5.1	0.0	chr20	51023134	51023172	(13420995)	+	GA-rich	Low_complexity	1	41	(0)	2348236
2381	8.2	0.3	0.0	chr20	51700550	51700843	(12743324)	+	AluSp	SINE/Alu	2	296	(17)	2349690
15	16.4	0.0	5.1	chr20	51700844	51700869	(12743298)	+	GA-rich	Low_complexity	11	36	(0)	2349691
1816	13.4	9.2	0.0	chr20	51830433	51830707	(12613460)	+	AluSz	SINE/Alu	2	304	(8)	2350016
55	14.4	0.0	1.1	chr20	51830708	51830791	(12613376)	+	GA-rich	Low_complexity	10	93	(0)	2350017
1890	13.5	0.4	0.0	chr20	51830882	51831140	(12613027)	C	AluSx	SINE/Alu	(51)	261	2	2350018
41	2.6	0.0	0.0	chr20	51841022	51841061	(12603106)	+	(TC)n	Simple_repeat	1	40	(0)	2350046
954	13.1	1.4	0.0	chr20	52105436	52105580	(12338587)	+	MER5A1	DNA/hAT-Charlie	16	162	(4)	2350768
398	2.2	0.0	0.0	chr20	52314834	52314879	(12129288)	+	L1PA4	LINE/L1	5903	5948	(206)	2351249
138	9.0	2.3	2.0	chr20	52314882	52315008	(12129159)	+	(CTTT)n	Simple_repeat	4	130	(0)	2351250
1169	16.5	1.4	3.6	chr20	52315142	52315361	(12128806)	+	MER20	DNA/hAT-Charlie	4	218	(1)	2351251
328	28.2	3.3	8.6	chr20	52987225	52987352	(11456815)	C	MER5A	DNA/hAT-Charlie	(1)	188	68	2352562
73	6.2	3.9	0.0	chr20	52987445	52987547	(11456620)	+	(CT)n	Simple_repeat	1	107	(0)	2352563
389	31.9	3.5	4.6	chr20	53136441	53136614	(11307553)	C	MIRb	SINE/MIR	(0)	262	91	2352860
31	11.2	2.0	0.0	chr20	53284746	53284794	(11159373)	+	(AG)n	Simple_repeat	1	50	(0)	2353155
2354	7.5	0.3	0.3	chr20	53548194	53548478	(10895689)	+	AluY	SINE/Alu	1	286	(25)	2353727
635	27.8	6.0	7.9	chr20	53610070	53610460	(10833707)	+	L1ME4c	LINE/L1	272	654	(176)	2353853
991	11.7	1.2	9.4	chr20	53646609	53646788	(10797379)	C	AluJo	SINE/Alu	(11)	301	137	2353954
509	19.6	5.5	0.0	chr20	53646857	53646958	(10797209)	+	AluJo	SINE/Alu	4	111	(201)	2353955
33	3.1	0.0	0.0	chr20	53646960	53646992	(10797175)	+	(TC)n	Simple_repeat	1	33	(0)	2353956
2107	11.9	3.3	0.3	chr20	53646993	53647286	(10796881)	C	AluSz	SINE/Alu	(9)	303	1	2353957
36	7.2	0.0	0.0	chr20	53735956	53735999	(10708168)	+	(TC)n	Simple_repeat	1	44	(0)	2354219
30	2.8	0.0	0.0	chr20	53754055	53754090	(10690077)	+	(TC)n	Simple_repeat	1	36	(0)	2354262
43	2.5	0.0	0.0	chr20	53754091	53754131	(10690036)	+	(TG)n	Simple_repeat	1	41	(0)	2354263
1526	17.6	0.9	2.1	chr20	53831681	53831922	(10612245)	C	MER33	DNA/hAT-Charlie	(83)	241	4	2354458
235	29.7	7.5	7.1	chr20	53831923	53831970	(10612197)	+	L2a	LINE/L2	3309	3352	(74)	2354457
31	3.3	0.0	0.0	chr20	53834308	53834338	(10609829)	+	(CT)n	Simple_repeat	1	31	(0)	2354466
39	13.9	1.5	0.0	chr20	53873159	53873223	(10570944)	+	GA-rich	Low_complexity	1	66	(0)	2354556
708	24.9	10.6	6.8	chr20	53899230	53899609	(10544558)	C	LTR16A1	LTR/ERVL	(9)	447	52	2354621
38	27.0	1.1	0.0	chr20	53915271	53915364	(10528803)	+	GA-rich	Low_complexity	1	95	(0)	2354661
48	0.0	0.0	0.0	chr20	53954295	53954335	(10489832)	+	(GA)n	Simple_repeat	1	41	(0)	2354756
828	31.3	8.8	2.8	chr20	53954336	53954391	(10489776)	+	MLT1K	LTR/ERVL-MaLR	424	483	(112)	2354755
99	9.1	1.8	1.7	chr20	56010130	56010300	(8433867)	+	(TC)n	Simple_repeat	1	174	(0)	2358266
35	2.8	0.0	0.0	chr20	57016014	57016050	(7428117)	+	(TTCC)n	Simple_repeat	1	37	(0)	2360377
23	11.5	0.0	0.0	chr20	57016051	57016089	(7428078)	+	(CTCT)n	Simple_repeat	1	39	(0)	2360378
2439	9.4	0.3	0.0	chr20	57016090	57016398	(7427769)	C	AluSx1	SINE/Alu	(2)	310	1	2360379
397	25.7	8.9	2.0	chr20	57187372	57187518	(7256649)	+	MLT1L	LTR/ERVL-MaLR	111	268	(342)	2360728
35	0.0	0.0	0.0	chr20	57187555	57187584	(7256583)	+	(CT)n	Simple_repeat	1	30	(0)	2360729
24	3.3	3.2	0.0	chr20	57565232	57565262	(6878905)	+	(GA)n	Simple_repeat	1	32	(0)	2361399
959	28.5	4.5	5.9	chr20	57636345	57636511	(6807656)	+	MLT1A1	LTR/ERVL-MaLR	2	160	(248)	2361525
33	5.2	0.0	2.4	chr20	57636512	57636553	(6807614)	+	(TC)n	Simple_repeat	1	42	(0)	2361526
959	28.5	4.5	5.9	chr20	57636554	57636792	(6807375)	+	MLT1A1	LTR/ERVL-MaLR	161	401	(7)	2361525
173	28.0	1.9	1.1	chr20	58375007	58375530	(6068637)	+	(CT)n	Simple_repeat	1	534	(0)	2362822
62	1.7	1.6	0.0	chr20	58590213	58590273	(5853894)	+	(AG)n	Simple_repeat	1	62	(0)	2363196
13	15.9	2.7	2.6	chr20	58890745	58890781	(5553386)	+	(CCACCG)n	Simple_repeat	1	38	(0)	2363582
16	23.9	0.0	2.4	chr20	58890782	58890822	(5553345)	+	(TG)n	Simple_repeat	1	41	(0)	2363583
28	17.8	0.0	0.0	chr20	58892124	58892174	(5551993)	+	(TC)n	Simple_repeat	1	51	(0)	2363591
253	18.9	4.1	2.1	chr20	59666513	59666701	(4777466)	+	HERVIP10FH-int	LTR/ERV1	804	996	(4106)	2364837
18	8.5	0.0	0.0	chr20	59666705	59666729	(4777438)	+	(AG)n	Simple_repeat	1	25	(0)	2364838
54	0.0	0.0	1.6	chr20	59953919	59953981	(4490186)	+	(AT)n	Simple_repeat	1	63	(0)	2365239
72	2.9	0.0	0.0	chr20	59953982	59954051	(4490116)	+	(AG)n	Simple_repeat	1	70	(0)	2365240
1970	10.0	6.2	0.8	chr20	59954052	59954310	(4489857)	C	AluSq2	SINE/Alu	(39)	274	1	2365241
107	32.7	1.7	0.5	chr20	59967775	59968087	(4476080)	+	(TCTC)n	Simple_repeat	4	319	(0)	2365270
2311	13.6	0.3	0.0	chr20	59968088	59968395	(4475772)	C	AluSx	SINE/Alu	(2)	310	2	2365271
2452	8.5	0.3	0.0	chr20	60247361	60247667	(4196500)	C	AluYm1	SINE/Alu	(3)	308	1	2365707
31	2.7	5.3	0.0	chr20	60247777	60247814	(4196353)	+	(CT)n	Simple_repeat	1	40	(0)	2365708
27	24.3	6.1	1.0	chr20	60247824	60247921	(4196246)	+	(TC)n	Simple_repeat	1	104	(0)	2365709
60	4.6	1.5	0.0	chr20	61138333	61138400	(3305767)	+	(CT)n	Simple_repeat	1	69	(0)	2366988
12	25.8	0.0	2.3	chr20	61253972	61254014	(3190153)	+	(CCTCCC)n	Simple_repeat	1	43	(0)	2367144
65	0.0	0.0	0.0	chr20	62204338	62204392	(2239775)	+	(GT)n	Simple_repeat	1	55	(0)	2368280
30	0.0	0.0	0.0	chr20	62204393	62204425	(2239742)	+	(AG)n	Simple_repeat	1	33	(0)	2368281
797	9.7	0.0	0.0	chr20	62204426	62204528	(2239639)	C	AluSx3	SINE/Alu	(30)	281	179	2368282
14	14.4	2.3	6.7	chr20	62303150	62303193	(2140974)	+	(GGCG)n	Simple_repeat	1	45	(0)	2368407
196	28.3	11.2	0.2	chr20	62407748	62407877	(2036290)	+	MIRc	SINE/MIR	1	143	(125)	2368522
325	23.9	2.8	0.5	chr20	62451527	62452348	(1991819)	+	GA-rich	Low_complexity	1	845	(0)	2368586
49	0.0	0.0	0.0	chr20	62550723	62550764	(1893403)	+	(TC)n	Simple_repeat	1	42	(0)	2368689
71	25.3	3.1	0.0	chr20	62733606	62733800	(1710367)	+	GA-rich	Low_complexity	1	201	(0)	2368886
1197	19.1	0.5	0.0	chr20	62815709	62815917	(1628250)	C	AluJb	SINE/Alu	(23)	289	80	2368982
310	30.3	2.3	0.5	chr20	63056910	63057442	(1386725)	+	(TCAT)n	Simple_repeat	1	546	(0)	2369232
136	14.2	0.9	0.0	chr20	63101557	63101782	(1342385)	+	(TCTCTC)n	Simple_repeat	1	228	(0)	2369269
20	28.9	0.0	0.0	chr20	63101843	63101894	(1342273)	+	(TG)n	Simple_repeat	1	52	(0)	2369270
759	19.1	4.4	0.0	chr20	63628567	63628697	(815470)	+	FLAM_C	SINE/Alu	1	137	(6)	2369787
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
328	27.1	3.7	1.5	chr20	63730789	63730919	(713248)	+	Charlie18a	DNA/hAT-Charlie	165	298	(44)	2369955
57	0.0	0.0	0.0	chr20	63730923	63730971	(713196)	+	(TC)n	Simple_repeat	1	49	(0)	2369956
18	0.0	0.0	0.0	chr20	63730972	63730991	(713176)	+	(GT)n	Simple_repeat	1	20	(0)	2369957
580	23.9	10.1	4.5	chr20	63973530	63973907	(470260)	+	MLT1D	LTR/ERVL-MaLR	29	451	(16)	2370315
22	22.0	2.3	5.6	chr20	64083732	64083819	(360348)	+	(CGCCC)n	Simple_repeat	1	90	(0)	2370491
797	22.4	0.5	0.1	chr21	8228115	8229742	(38480241)	+	(TCTC)n	Simple_repeat	1	1633	(0)	2373325
1247	22.8	0.6	0.2	chr21	8232546	8235312	(38474671)	+	(TCTC)n	Simple_repeat	1	2784	(0)	2373335
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
291	14.6	3.7	0.5	chr21	10378635	10379195	(36330788)	+	(CT)n	Simple_repeat	1	582	(0)	2375433
38	0.0	0.0	0.0	chr21	15399504	15399536	(31310447)	+	(TC)n	Simple_repeat	1	33	(0)	2379073
18	4.8	0.0	0.0	chr21	15399537	15399558	(31310425)	+	(GT)n	Simple_repeat	1	22	(0)	2379074
61	19.1	0.0	0.0	chr21	15399576	15399689	(31310294)	+	GA-rich	Low_complexity	1	114	(0)	2379075
1970	18.4	0.2	3.1	chr21	15399690	15400094	(31309889)	C	MLT2D	LTR/ERVL	(20)	534	3	2379076
35	0.0	0.0	0.0	chr21	15628454	15628491	(31081492)	+	(AC)n	Simple_repeat	1	38	(0)	2379375
49	4.0	0.0	0.0	chr21	15628492	15628542	(31081441)	+	(AG)n	Simple_repeat	1	51	(0)	2379376
12	25.2	0.0	7.7	chr21	15628572	15628636	(31081347)	+	(TTTTGAA)n	Simple_repeat	1	65	(0)	2379377
18	8.7	0.0	0.0	chr21	16420333	16420357	(30289626)	+	(T)n	Simple_repeat	1	25	(0)	2380416
1328	27.3	10.2	1.8	chr21	24113089	24113543	(22596440)	C	LTR40A1	LTR/ERVL	(78)	506	9	2390650
52	0.0	2.1	0.0	chr21	24113576	24113623	(22596360)	+	(AG)n	Simple_repeat	1	49	(0)	2390651
4054	18.4	2.8	3.1	chr21	24113735	24114295	(22595688)	+	L1MA4	LINE/L1	4443	5004	(1139)	2390652
28	10.8	0.0	0.0	chr21	25646572	25646612	(21063371)	+	(GA)n	Simple_repeat	1	41	(0)	2392785
41	7.2	0.0	0.0	chr21	26166869	26166926	(20543057)	+	(AGAGAG)n	Simple_repeat	1	58	(0)	2393601
30	0.0	0.0	0.0	chr21	26166928	26166953	(20543030)	+	(GT)n	Simple_repeat	1	26	(0)	2393602
2127	11.2	4.7	2.7	chr21	26834994	26835351	(19874632)	+	THE1B	LTR/ERVL-MaLR	1	423	(3)	2394577
964	25.9	6.7	5.7	chr21	27569222	27569401	(19140582)	+	MLT1A	LTR/ERVL-MaLR	1	190	(184)	2395602
71	10.2	0.8	0.8	chr21	27569402	27569519	(19140464)	+	(CT)n	Simple_repeat	1	119	(0)	2395603
964	25.9	6.7	5.7	chr21	27569520	27569706	(19140277)	+	MLT1A	LTR/ERVL-MaLR	191	372	(2)	2395602
378	7.0	0.0	9.3	chr21	27805410	27805490	(18904493)	C	MLT2D	LTR/ERVL	(0)	560	494	2395894
49	9.6	0.0	0.0	chr21	27805493	27805574	(18904409)	+	(AG)n	Simple_repeat	1	82	(0)	2395895
1092	24.3	2.9	2.2	chr21	27805581	27805895	(18904088)	C	MLT2D	LTR/ERVL	(53)	344	3	2395894
1004	27.3	15.2	2.8	chr21	28600950	28601604	(18108379)	+	L2a	LINE/L2	2508	3255	(171)	2396976
48	0.0	0.0	0.0	chr21	28601605	28601645	(18108338)	+	(TC)n	Simple_repeat	1	41	(0)	2396977
1004	25.9	11.0	6.1	chr21	28601646	28601804	(18108179)	+	L2a	LINE/L2	3256	3426	(0)	2396976
35	0.0	0.0	0.0	chr21	29423027	29423056	(17286927)	+	(AG)n	Simple_repeat	1	30	(0)	2398282
73	1.5	0.0	0.0	chr21	29457518	29457584	(17252399)	+	(CT)n	Simple_repeat	1	67	(0)	2398344
102	16.1	0.5	3.7	chr21	29867820	29868025	(16841958)	+	A-rich	Low_complexity	1	199	(0)	2398974
27	0.0	0.0	3.3	chr21	29868026	29868055	(16841928)	+	(AAGG)n	Simple_repeat	1	30	(0)	2398975
16	14.0	4.8	2.3	chr21	31086435	31086476	(15623507)	+	GA-rich	Low_complexity	1	44	(0)	2400736
65	0.0	0.0	0.0	chr21	31086494	31086548	(15623435)	+	(AG)n	Simple_repeat	1	55	(0)	2400737
400	28.6	3.5	1.4	chr21	31110667	31110808	(15599175)	C	MIRb	SINE/MIR	(100)	168	24	2400782
37	19.9	1.1	2.2	chr21	31173487	31173577	(15536406)	+	GA-rich	Low_complexity	1	92	(0)	2400870
38	0.0	0.0	0.0	chr21	31298736	31298768	(15411215)	+	(GT)n	Simple_repeat	1	33	(0)	2401070
30	0.0	0.0	0.0	chr21	31298800	31298825	(15411158)	+	(GA)n	Simple_repeat	1	26	(0)	2401071
2045	17.1	6.6	1.5	chr21	31392616	31392955	(15317028)	+	MSTB	LTR/ERVL-MaLR	1	363	(63)	2401241
2193	13.0	0.0	0.0	chr21	31392956	31393255	(15316728)	C	AluSx1	SINE/Alu	(12)	300	1	2401242
3378	19.8	0.8	0.5	chr21	31394026	31394686	(15315297)	+	L1MC1	LINE/L1	5667	6329	(4)	2401243
35	2.5	0.0	0.0	chr21	31394688	31394728	(15315255)	+	(TC)n	Simple_repeat	1	41	(0)	2401244
55	0.0	0.0	0.0	chr21	31394729	31394775	(15315208)	+	(CA)n	Simple_repeat	1	47	(0)	2401245
367	21.6	17.2	1.6	chr21	31425463	31425589	(15284394)	C	MER5A1	DNA/hAT-Charlie	(4)	162	12	2401307
35	20.3	0.0	0.0	chr21	31425616	31425687	(15284296)	+	(TCTC)n	Simple_repeat	1	72	(0)	2401308
2020	11.7	0.0	10.5	chr21	31425688	31426030	(15283953)	C	AluSx	SINE/Alu	(3)	309	3	2401309
1862	16.8	12.0	1.6	chr21	31524118	31524498	(15185485)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2401532
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
14	15.6	3.4	8.2	chr21	31659922	31659980	(15050003)	+	(GCCCG)n	Simple_repeat	1	61	(0)	2401850
28	20.6	7.3	1.7	chr21	31660030	31660138	(15049845)	+	G-rich	Low_complexity	1	117	(0)	2401851
462	29.7	1.9	2.0	chr21	31891972	31892143	(14817840)	+	MIRb	SINE/MIR	14	185	(77)	2402281
16	0.0	0.0	0.0	chr21	31892163	31892180	(14817803)	+	(AT)n	Simple_repeat	1	18	(0)	2402282
35	0.0	0.0	0.0	chr21	31892181	31892210	(14817773)	+	(AG)n	Simple_repeat	1	30	(0)	2402283
19	0.0	0.0	0.0	chr21	31892211	31892231	(14817752)	+	(TG)n	Simple_repeat	1	21	(0)	2402284
2227	12.0	0.0	1.3	chr21	31892284	31892599	(14817384)	+	AluSx	SINE/Alu	1	312	(0)	2402285
1755	14.3	9.1	6.2	chr21	31914539	31914910	(14795073)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	5	2402320
241	20.5	5.9	14.0	chr21	32080504	32080724	(14629259)	C	Arthur1	DNA/hAT-Tip100	(42)	3905	3704	2402613
50	7.0	4.0	0.0	chr21	32080732	32080807	(14629176)	+	(TC)n	Simple_repeat	1	79	(0)	2402614
2275	11.3	0.0	0.3	chr21	32080808	32081103	(14628880)	C	AluSx	SINE/Alu	(16)	296	1	2402615
89	20.3	0.0	2.0	chr21	32130102	32130283	(14579700)	+	GA-rich	Low_complexity	13	191	(0)	2402717
249	20.4	3.9	0.0	chr21	32130286	32130334	(14579649)	+	MLT1J	LTR/ERVL-MaLR	353	403	(207)	2402714
1088	24.0	14.5	3.1	chr21	32772814	32773070	(13936913)	C	L1ME4b	LINE/L1	(22)	870	576	2403730
21	19.3	0.0	0.0	chr21	33025855	33025901	(13684082)	+	(CCCCGC)n	Simple_repeat	1	47	(0)	2404180
34	2.6	2.4	2.3	chr21	33026738	33026779	(13683204)	+	(CT)n	Simple_repeat	1	43	(0)	2404182
46	14.0	1.6	7.6	chr21	33157371	33157499	(13552484)	+	(CTCCTC)n	Simple_repeat	1	131	(0)	2404406
1783	11.6	4.8	4.1	chr21	33161618	33161910	(13548073)	C	AluSz6	SINE/Alu	(16)	296	2	2404412
47	5.8	0.0	0.0	chr21	33161914	33161967	(13548016)	+	(TC)n	Simple_repeat	1	54	(0)	2404413
531	26.9	5.9	1.1	chr21	33184884	33185094	(13524889)	+	MLT1G1	LTR/ERVL-MaLR	1	222	(338)	2404464
48	14.1	1.1	2.2	chr21	33185095	33185184	(13524799)	+	(TC)n	Simple_repeat	1	91	(0)	2404465
1317	25.4	5.3	0.3	chr21	33185186	33185528	(13524455)	+	MLT1G1	LTR/ERVL-MaLR	219	579	(0)	2404464
1957	20.5	5.8	2.7	chr21	33971722	33972208	(12737775)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2405914
19	0.0	0.0	0.0	chr21	34753378	34753398	(11956585)	+	(AC)n	Simple_repeat	1	21	(0)	2407116
72	0.0	0.0	0.0	chr21	34753399	34753459	(11956524)	+	(CT)n	Simple_repeat	1	61	(0)	2407117
19	7.5	0.0	3.3	chr21	34795331	34795384	(11914599)	+	(TC)n	Simple_repeat	1	52	(0)	2407199
14	20.9	3.2	6.2	chr21	34888816	34888877	(11821106)	+	(CGC)n	Simple_repeat	1	64	(0)	2407309
49	0.0	0.0	0.0	chr21	35038573	35038614	(11671369)	+	(CT)n	Simple_repeat	1	42	(0)	2407516
39	13.3	4.0	0.0	chr21	35047477	35047514	(11662469)	+	(TC)n	Simple_repeat	1	41	(0)	2407529
56	0.0	0.0	0.0	chr21	35047515	35047562	(11662421)	+	(AC)n	Simple_repeat	1	48	(0)	2407530
39	13.3	4.0	0.0	chr21	35047563	35047598	(11662385)	+	(TC)n	Simple_repeat	2	37	(0)	2407531
70	2.9	1.4	0.0	chr21	35360149	35360220	(11349763)	+	(TC)n	Simple_repeat	1	73	(0)	2408000
37	8.2	1.9	0.0	chr21	35768210	35768262	(10941721)	+	(GA)n	Simple_repeat	1	54	(0)	2408612
19115	12.6	4.8	4.5	chr21	36104756	36109248	(10600735)	+	HERVIP10FH-int	LTR/ERV1	1	7556	(181)	2409144
2530	15.0	13.0	0.3	chr21	36355854	36356484	(10353499)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(352)	716	2	2409688
16	22.1	2.1	0.0	chr21	36385368	36385414	(10324569)	+	(GCGCGGC)n	Simple_repeat	1	48	(0)	2409764
44	12.4	1.4	0.0	chr21	36489159	36489229	(10220754)	+	(GA)n	Simple_repeat	1	72	(0)	2409983
1707	11.3	0.7	13.2	chr21	36594013	36594322	(10115661)	C	AluSx	SINE/Alu	(40)	272	2	2410163
83	15.5	3.4	1.6	chr21	36594323	36594429	(10115554)	+	(TCTT)n	Simple_repeat	3	113	(0)	2410164
21	23.6	3.6	0.0	chr21	36594508	36594563	(10115420)	+	GA-rich	Low_complexity	1	58	(0)	2410165
233	26.2	7.2	7.2	chr21	36861040	36861150	(9848833)	C	L2b	LINE/L2	(1)	3374	3264	2410571
261	30.7	8.3	0.0	chr21	36927283	36927370	(9782613)	+	Tigger12A	DNA/TcMar-Tigger	717	812	(7)	2410679
15	24.4	2.1	0.0	chr21	36989779	36989826	(9720157)	+	G-rich	Low_complexity	1	49	(0)	2410805
13	9.8	0.0	0.0	chr21	37060460	37060481	(9649502)	+	(GCA)n	Simple_repeat	1	22	(0)	2410949
42	0.0	0.0	0.0	chr21	37655180	37655224	(9054759)	+	(TG)n	Simple_repeat	1	45	(0)	2411923
72	0.0	0.0	0.0	chr21	37655225	37655285	(9054698)	+	(GA)n	Simple_repeat	1	61	(0)	2411924
198	23.9	5.6	1.5	chr21	38075834	38075901	(8634082)	C	L2	LINE/L2	(1637)	1782	1712	2412537
104	18.7	5.5	0.4	chr21	38075902	38076158	(8633825)	+	GA-rich	Low_complexity	1	271	(0)	2412548
934	29.4	7.2	4.7	chr21	38181411	38182475	(8527508)	+	L1MEb	LINE/L1	72	1000	(5136)	2412709
286	15.4	0.0	1.8	chr21	38182479	38182544	(8527439)	C	MLT2D	LTR/ERVL	(4)	556	494	2412710
2045	19.0	1.6	2.6	chr21	38182562	38182950	(8527033)	C	MLT2D	LTR/ERVL	(20)	394	10	2412710
1367	22.6	5.6	4.8	chr21	38424025	38424187	(8285796)	+	MLT1A	LTR/ERVL-MaLR	18	189	(185)	2413001
44	0.0	0.0	0.0	chr21	38424188	38424225	(8285758)	+	(CT)n	Simple_repeat	1	38	(0)	2413002
1367	22.6	5.6	4.8	chr21	38424226	38424415	(8285568)	+	MLT1A	LTR/ERVL-MaLR	190	374	(0)	2413001
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
30	3.5	0.0	0.0	chr21	38973998	38974027	(7735956)	+	(CT)n	Simple_repeat	1	30	(0)	2413797
13	10.7	3.1	3.0	chr21	38990198	38990229	(7719754)	+	GA-rich	Low_complexity	1	33	(0)	2413824
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
73	0.0	0.0	0.0	chr21	39679809	39679870	(7030113)	+	(GA)n	Simple_repeat	1	62	(0)	2415006
181	7.1	10.1	0.5	chr21	39679909	39680265	(7029718)	+	(TATC)n	Simple_repeat	1	393	(0)	2415007
1291	22.0	2.7	10.8	chr21	39834530	39834927	(6875056)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2415243
62	0.0	0.0	0.0	chr21	40156288	40156340	(6553643)	+	(AG)n	Simple_repeat	1	53	(0)	2415623
227	16.4	5.0	2.6	chr21	40619940	40620496	(6089487)	+	A-rich	Low_complexity	1	585	(0)	2416298
2253	22.7	8.9	1.1	chr21	41758080	41758640	(4951343)	C	L1MB4	LINE/L1	(8)	6172	5564	2417964
2526	9.4	6.5	3.8	chr21	41783544	41783964	(4926019)	+	LTR3B	LTR/ERVK	1	433	(4)	2417996
1916	26.2	7.0	2.6	chr21	41946680	41947086	(4762897)	+	L1MC4a	LINE/L1	7304	7744	(138)	2418208
39	15.3	2.6	0.0	chr21	41947087	41947164	(4762819)	+	(TCTC)n	Simple_repeat	1	80	(0)	2418211
2444	7.2	0.3	0.0	chr21	41947166	41947456	(4762527)	C	AluSp	SINE/Alu	(21)	292	1	2418212
31	0.0	0.0	0.0	chr21	43726013	43726039	(2983944)	+	(TC)n	Simple_repeat	1	27	(0)	2420704
1944	18.6	7.8	2.6	chr21	43778812	43779275	(2930708)	C	LTR26C	LTR/ERV1	(0)	539	50	2420785
24	14.7	2.1	0.0	chr21	43779276	43779329	(2930654)	+	(CCCT)n	Simple_repeat	1	55	(0)	2420786
2114	11.0	3.5	2.3	chr21	43779330	43779637	(2930346)	C	AluSx	SINE/Alu	(0)	312	1	2420787
19	11.1	0.0	0.0	chr21	44843579	44843607	(1866376)	+	(TC)n	Simple_repeat	1	29	(0)	2422235
16	20.6	0.0	0.0	chr21	44843608	44843616	(1866367)	+	(GTCTCT)n	Simple_repeat	2	39	(0)	2422236
20	14.9	2.7	0.0	chr21	44843680	44843716	(1866267)	+	(TC)n	Simple_repeat	1	38	(0)	2422237
18	17.1	0.0	0.0	chr21	44843740	44843772	(1866211)	+	(CT)n	Simple_repeat	1	33	(0)	2422238
355	23.5	15.0	0.0	chr21	44843799	44843951	(1866032)	+	MLT1A	LTR/ERVL-MaLR	195	374	(0)	2422234
20	15.3	9.0	1.4	chr21	44873425	44873491	(1836492)	+	(ACCCCG)n	Simple_repeat	1	73	(0)	2422271
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
59	1.9	0.0	0.0	chr21	45646054	45646108	(1063875)	+	(TC)n	Simple_repeat	1	55	(0)	2423036
35	0.0	0.0	0.0	chr21	45646109	45646146	(1063837)	+	(GT)n	Simple_repeat	1	38	(0)	2423037
95	12.4	0.0	1.3	chr21	45901634	45901786	(808197)	+	(GA)n	Simple_repeat	1	153	(0)	2423317
339	16.1	1.0	0.0	chr21	45980515	45981115	(728868)	+	(CTCTCT)n	Simple_repeat	1	607	(0)	2423391
378	13.2	3.9	3.5	chr21	45984618	45985459	(724524)	+	(CAGAGA)n	Simple_repeat	1	875	(0)	2423395
6541	12.7	4.3	1.3	chr21	46143385	46144361	(565622)	+	LTR13	LTR/ERVK	1	1007	(0)	2423545
197	18.1	2.7	4.3	chr21	46144362	46144774	(565209)	+	(CTCC)n	Simple_repeat	4	412	(0)	2423546
1896	16.2	0.0	0.3	chr21	46310527	46310809	(399174)	+	AluSx	SINE/Alu	1	282	(30)	2423786
16	0.0	0.0	0.0	chr21	46310820	46310840	(399143)	+	(TAAA)n	Simple_repeat	1	21	(0)	2423787
2023	13.2	0.7	1.0	chr21	46310867	46311169	(398814)	C	AluSx1	SINE/Alu	(10)	302	1	2423788
2052	25.6	8.7	3.5	chr21	46494326	46495127	(214856)	C	L1MC5	LINE/L1	(601)	8703	7856	2424048
22	6.1	0.0	2.8	chr21	46495129	46495164	(214819)	+	(CTCC)n	Simple_repeat	1	36	(0)	2424049
20	25.7	2.7	1.3	chr21	46495165	46495179	(214804)	+	(TCTC)n	Simple_repeat	2	53	(0)	2424050
84	0.0	1.0	5.0	chr21	46495180	46495279	(214704)	+	(TTCTC)n	Simple_repeat	1	101	(0)	2424051
2238	9.5	0.3	0.0	chr21	46495281	46495563	(214420)	C	AluSp	SINE/Alu	(25)	288	5	2424052
609	22.7	0.6	0.2	chr22	11266180	11266808	(39551660)	+	GA-rich	Low_complexity	1	631	(0)	2424959
643	22.0	0.5	0.4	chr22	11615918	11616592	(39201876)	+	(TCTC)n	Simple_repeat	1	677	(0)	2425259
2373	10.2	0.0	0.0	chr22	11616593	11616897	(39201571)	C	AluYk3	SINE/Alu	(4)	307	3	2425260
643	22.0	0.5	0.4	chr22	11616898	11617618	(39200850)	+	(TCTC)n	Simple_repeat	2	722	(0)	2425261
111	19.4	1.7	0.0	chr22	11619457	11619690	(39198778)	+	(CTCT)n	Simple_repeat	1	238	(0)	2425266
2918	23.4	4.6	4.7	chr22	16790715	16791685	(34026783)	+	L1MA8	LINE/L1	6702	7710	(0)	2427823
93	11.3	1.4	0.0	chr22	16791688	16791834	(34026634)	+	(AGAG)n	Simple_repeat	1	149	(0)	2427827
1951	16.3	0.0	2.2	chr22	16791903	16792245	(34026223)	C	AluSq2	SINE/Alu	(0)	313	1	2427828
74	2.9	0.0	0.0	chr22	16909456	16909527	(33908941)	+	(TC)n	Simple_repeat	1	72	(0)	2427977
4326	14.3	6.4	1.4	chr22	16909600	16910448	(33908020)	C	MER4D1	LTR/ERV1	(77)	823	1	2427978
1644	10.8	0.9	0.9	chr22	17066536	17066766	(33751702)	+	AluSx1	SINE/Alu	78	308	(4)	2428155
47	0.0	0.0	0.0	chr22	17066900	17066939	(33751529)	+	(AG)n	Simple_repeat	1	40	(0)	2428156
65	12.7	4.3	2.1	chr22	17066940	17067074	(33751394)	+	GA-rich	Low_complexity	4	141	(0)	2428157
15	38.4	0.0	0.0	chr22	17120971	17120993	(33697475)	+	(TGCTGC)n	Simple_repeat	32	80	(0)	2428251
1968	10.4	3.9	0.7	chr22	17957439	17957737	(32860731)	+	AluSz6	SINE/Alu	3	311	(1)	2429940
21	16.6	0.0	0.0	chr22	17957745	17957785	(32860683)	+	GA-rich	Low_complexity	1	41	(0)	2429941
33	0.0	0.0	0.0	chr22	19062780	19062807	(31755661)	+	(CT)n	Simple_repeat	1	28	(0)	2431369
1333	17.8	9.6	2.9	chr22	19103764	19104044	(31714424)	+	AluJr4	SINE/Alu	1	302	(10)	2431447
995	20.1	4.6	0.0	chr22	19104044	19104252	(31714216)	C	Charlie1	DNA/hAT-Charlie	(2562)	219	1	2431448
47	27.5	3.6	3.9	chr22	19431483	19431707	(31386761)	+	(GCC)n	Simple_repeat	1	233	(0)	2431996
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
487	25.0	9.8	0.0	chr22	19855963	19856118	(30962350)	+	L5	LINE/RTE-X	2078	2250	(15)	2432614
13	18.4	1.2	4.9	chr22	20117489	20117554	(30700914)	+	G-rich	Low_complexity	1	63	(0)	2432925
2184	10.4	0.0	0.3	chr22	20500001	20500297	(30318171)	+	AluSx3	SINE/Alu	2	297	(14)	2433437
477	18.2	2.5	15.4	chr22	20500308	20500399	(30318069)	+	MER31-int	LTR/ERV1	502	574	(4782)	2433438
627	19.0	7.2	0.0	chr22	20500408	20500523	(30317945)	C	AluJr	SINE/Alu	(187)	125	1	2433439
477	18.2	2.5	15.4	chr22	20500524	20500612	(30317856)	+	MER31-int	LTR/ERV1	575	659	(4697)	2433438
13	8.1	3.6	3.5	chr22	20702840	20702867	(30115601)	+	(GCA)n	Simple_repeat	1	29	(0)	2433782
276	36.6	10.8	2.5	chr22	21643165	21643486	(29174982)	C	L2c	LINE/L2	(5)	3382	3031	2435591
2056	13.3	1.0	0.3	chr22	21656094	21656393	(29162075)	+	AluSx	SINE/Alu	1	302	(10)	2435621
46	13.5	0.0	0.0	chr22	21656396	21656471	(29161997)	+	(GAGA)n	Simple_repeat	1	76	(0)	2435622
16	17.6	0.0	0.0	chr22	21656451	21656477	(29161991)	+	A-rich	Low_complexity	1	27	(0)	2435623
2036	13.3	2.0	0.0	chr22	21665461	21665754	(29152714)	+	AluJb	SINE/Alu	1	300	(12)	2435646
2193	10.9	0.3	0.3	chr22	21814551	21814843	(29003625)	+	AluSg	SINE/Alu	1	293	(17)	2435952
72	1.5	0.0	0.0	chr22	21814846	21814911	(29003557)	+	(GA)n	Simple_repeat	1	66	(0)	2435953
317	26.5	4.0	6.4	chr22	21814913	21815028	(29003440)	C	FLAM_C	SINE/Alu	(112)	189	2	2435954
1494	27.5	9.4	7.7	chr22	22721977	22723123	(28095345)	+	L1MEc	LINE/L1	350	1521	(4879)	2437300
1580	15.1	0.4	0.4	chr22	22723124	22723403	(28095065)	C	L1MA2	LINE/L1	(0)	6304	6025	2437301
1383	15.7	15.9	0.4	chr22	23558423	23558648	(27259820)	+	AluJb	SINE/Alu	2	259	(53)	2438479
80	0.0	0.0	0.0	chr22	23558649	23558716	(27259752)	+	(GA)n	Simple_repeat	1	68	(0)	2438480
1383	15.7	15.9	0.4	chr22	23558717	23558744	(27259724)	+	AluJb	SINE/Alu	276	303	(9)	2438479
2164	13.4	0.0	0.0	chr22	23558752	23559049	(27259419)	+	AluSz	SINE/Alu	1	298	(14)	2438481
12	28.0	2.3	0.0	chr22	23894956	23894999	(26923469)	+	(CGCGG)n	Simple_repeat	1	45	(0)	2439164
3812	24.0	5.9	2.1	chr22	24026350	24027505	(26790963)	C	L1MD	LINE/L1	(945)	5201	3995	2439392
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
246	22.4	3.9	0.0	chr22	24727227	24727275	(26091193)	+	MLT1E2	LTR/ERVL-MaLR	93	143	(510)	2440540
910	28.2	13.2	1.5	chr22	24727318	24727481	(26090987)	+	MLT1E2	LTR/ERVL-MaLR	159	352	(275)	2440540
42	0.0	0.0	0.0	chr22	24851450	24851485	(25966983)	+	(GA)n	Simple_repeat	1	36	(0)	2440802
50	0.0	0.0	0.0	chr22	25093683	25093737	(25724731)	+	(AC)n	Simple_repeat	1	55	(0)	2441453
149	3.4	0.0	0.0	chr22	25093738	25093886	(25724582)	+	(CT)n	Simple_repeat	1	149	(0)	2441454
27	0.0	0.0	0.0	chr22	25093888	25093913	(25724555)	+	(CTTCTG)n	Simple_repeat	1	26	(0)	2441455
262	24.6	0.0	0.0	chr22	25400796	25400852	(25417616)	C	MIRb	SINE/MIR	(94)	174	118	2442122
1492	17.4	2.7	17.9	chr22	25526416	25526855	(25291613)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	4	2442417
1646	17.9	11.4	6.7	chr22	25616189	25616594	(25201874)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2442579
1356	14.9	13.8	1.6	chr22	25930506	25930753	(24887715)	C	AluJb	SINE/Alu	(9)	303	21	2443182
162	24.2	5.1	0.6	chr22	26159872	26160357	(24658111)	+	GA-rich	Low_complexity	1	511	(0)	2443692
12	18.8	8.9	1.6	chr22	26169280	26169335	(24649133)	+	(GGCCGGC)n	Simple_repeat	1	61	(0)	2443714
15	20.6	3.3	4.8	chr22	26169405	26169465	(24649003)	+	(CCTCCTC)n	Simple_repeat	1	63	(0)	2443715
140	23.1	5.2	0.2	chr22	26642409	26642814	(24175654)	+	GA-rich	Low_complexity	1	427	(0)	2444837
54	8.6	0.0	0.0	chr22	26648881	26648954	(24169514)	+	(GA)n	Simple_repeat	1	74	(0)	2444851
184	31.9	5.5	2.8	chr22	26811124	26811194	(24007274)	+	MIR1_Amn	SINE/MIR	39	111	(119)	2445225
46	0.0	2.1	2.1	chr22	26811242	26811288	(24007180)	+	(CT)n	Simple_repeat	1	48	(0)	2445226
730	29.1	4.6	3.2	chr22	27053238	27053514	(23764954)	+	L2a	LINE/L2	3117	3397	(29)	2445806
58	1.9	0.0	0.0	chr22	27053515	27053568	(23764900)	+	(CT)n	Simple_repeat	1	54	(0)	2445807
39	0.0	0.0	0.0	chr22	27053569	27053611	(23764857)	+	(AT)n	Simple_repeat	1	43	(0)	2445808
2138	11.3	0.0	4.3	chr22	27142681	27142700	(23675768)	C	AluSz	SINE/Alu	(0)	312	293	2446035
41	0.0	0.0	0.0	chr22	27142701	27142735	(23675733)	+	(GA)n	Simple_repeat	1	35	(0)	2446036
2138	11.3	0.0	4.3	chr22	27142736	27143040	(23675428)	C	AluSz	SINE/Alu	(20)	292	1	2446035
739	22.8	20.8	0.6	chr22	27316381	27316601	(23501867)	+	L2a	LINE/L2	3031	3286	(140)	2446441
63	3.2	0.0	0.0	chr22	27316602	27316664	(23501804)	+	(TC)n	Simple_repeat	1	63	(0)	2446442
739	22.8	20.8	0.6	chr22	27316665	27316756	(23501712)	+	L2a	LINE/L2	3287	3423	(3)	2446441
57	0.0	0.0	0.0	chr22	27512869	27512917	(23305551)	+	(TC)n	Simple_repeat	1	49	(0)	2446854
103	28.4	2.5	2.2	chr22	27674557	27674917	(23143551)	+	(TCTTTC)n	Simple_repeat	1	370	(0)	2447268
68	29.2	2.6	0.4	chr22	27761182	27761414	(23057054)	+	(TCTC)n	Simple_repeat	1	239	(0)	2447460
11	25.6	0.0	4.3	chr22	27802093	27802138	(23016330)	+	G-rich	Low_complexity	1	46	(0)	2447537
2375	8.5	0.0	0.0	chr22	28817845	28818139	(22000329)	C	AluSx1	SINE/Alu	(17)	295	1	2449278
24	3.6	0.0	0.0	chr22	28818176	28818204	(22000264)	+	(TG)n	Simple_repeat	1	29	(0)	2449279
32	3.2	0.0	0.0	chr22	28818205	28818236	(22000232)	+	(GA)n	Simple_repeat	1	32	(0)	2449280
15	0.0	0.0	0.0	chr22	28883651	28883669	(21934799)	+	(GCC)n	Simple_repeat	1	19	(0)	2449492
46	14.8	0.0	1.2	chr22	28883804	28883887	(21934581)	+	(GCC)n	Simple_repeat	1	84	(0)	2449493
1781	16.3	1.6	2.3	chr22	28900827	28901133	(21917335)	+	AluJr	SINE/Alu	2	306	(6)	2449526
424	31.9	4.0	0.7	chr22	28901171	28901315	(21917153)	C	MER91B	DNA/hAT-Tip100	(13)	177	28	2449527
21	0.0	0.0	0.0	chr22	29610034	29610056	(21208412)	+	(AG)n	Simple_repeat	1	23	(0)	2450985
1648	17.5	0.0	2.6	chr22	29610058	29610360	(21208108)	+	AluJr	SINE/Alu	3	297	(15)	2450986
228	18.4	9.3	0.0	chr22	29627260	29627308	(21191160)	C	MIR3	SINE/MIR	(79)	129	76	2451023
2234	17.2	2.9	0.2	chr22	29921056	29921463	(20897005)	C	MSTB	LTR/ERVL-MaLR	(7)	419	1	2451647
22	22.4	5.7	1.4	chr22	30002806	30002875	(20815593)	+	(TC)n	Simple_repeat	1	74	(0)	2451795
182	31.3	2.9	0.0	chr22	30195879	30195945	(20622523)	C	L2	LINE/L2	(1676)	1743	1675	2452108
153	16.0	3.8	1.7	chr22	30219685	30220009	(20598459)	+	(CTTT)n	Simple_repeat	1	331	(0)	2452169
34	7.2	0.0	0.0	chr22	30220010	30220054	(20598414)	+	(TCCT)n	Simple_repeat	1	45	(0)	2452170
34	9.1	0.0	0.0	chr22	30220055	30220101	(20598367)	+	(TC)n	Simple_repeat	1	47	(0)	2452171
69	0.0	0.0	0.0	chr22	30730717	30730775	(20087693)	+	(TC)n	Simple_repeat	1	59	(0)	2453284
30	0.0	0.0	0.0	chr22	30730776	30730808	(20087660)	+	(AT)n	Simple_repeat	1	33	(0)	2453285
18	7.9	3.7	0.0	chr22	31055534	31055560	(19762908)	+	(AC)n	Simple_repeat	1	28	(0)	2453899
314	27.8	5.8	5.6	chr22	31055967	31056105	(19762363)	+	MIRb	SINE/MIR	17	160	(108)	2453900
34	14.5	6.4	1.2	chr22	31063316	31063393	(19755075)	+	(CT)n	Simple_repeat	1	83	(0)	2453926
860	12.8	0.0	0.0	chr22	31063461	31063577	(19754891)	+	FLAM_A	SINE/Alu	2	118	(24)	2453927
753	14.3	12.6	0.8	chr22	31958880	31959012	(18859456)	+	AluJb	SINE/Alu	127	277	(35)	2456022
15	5.5	0.0	0.0	chr22	31959017	31959035	(18859433)	+	(TC)n	Simple_repeat	1	19	(0)	2456023
34	4.9	2.4	0.0	chr22	31959047	31959088	(18859380)	+	(CT)n	Simple_repeat	1	43	(0)	2456024
2289	11.0	0.3	0.3	chr22	31959115	31959413	(18859055)	C	AluSq2	SINE/Alu	(14)	299	1	2456025
1918	21.0	1.3	2.2	chr22	32251247	32251458	(18567010)	+	MSTD	LTR/ERVL-MaLR	1	209	(187)	2456641
41	7.2	3.9	2.5	chr22	32251459	32251535	(18566933)	+	(TC)n	Simple_repeat	1	80	(0)	2456642
1918	21.0	1.3	2.2	chr22	32251536	32251722	(18566746)	+	MSTD	LTR/ERVL-MaLR	210	396	(0)	2456641
34	0.0	5.6	0.0	chr22	32375447	32375482	(18442986)	+	(CT)n	Simple_repeat	1	38	(0)	2456832
310	29.2	7.0	0.0	chr22	32473374	32473479	(18344989)	+	L2a	LINE/L2	3301	3414	(12)	2457048
2139	20.3	12.5	0.2	chr22	32473624	32474102	(18344366)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	2457052
21	17.8	0.0	0.0	chr22	32801158	32801195	(18017273)	+	GA-rich	Low_complexity	1	38	(0)	2457741
44	0.0	0.0	0.0	chr22	32869331	32869368	(17949100)	+	(TC)n	Simple_repeat	1	38	(0)	2457854
22	13.6	1.9	3.8	chr22	33030420	33030471	(17787997)	+	(AGAGAC)n	Simple_repeat	1	53	(0)	2458231
311	30.1	11.2	6.7	chr22	33030472	33030991	(17787477)	+	L1MEd	LINE/L1	869	1414	(5672)	2458232
42	0.0	0.0	0.0	chr22	33203067	33203102	(17615366)	+	(CT)n	Simple_repeat	1	36	(0)	2458560
21	0.0	0.0	0.0	chr22	33203103	33203125	(17615343)	+	(GT)n	Simple_repeat	1	23	(0)	2458561
25	16.2	0.0	0.0	chr22	33203128	33203175	(17615293)	+	GA-rich	Low_complexity	1	48	(0)	2458562
54	16.5	1.0	0.0	chr22	33396427	33396528	(17421940)	+	GA-rich	Low_complexity	1	103	(0)	2458972
13	9.6	0.0	0.0	chr22	33396602	33396624	(17421844)	+	(TCAT)n	Simple_repeat	1	23	(0)	2458973
81	2.6	0.0	0.0	chr22	35005165	35005242	(15813226)	+	(TC)n	Simple_repeat	1	78	(0)	2462051
1384	17.6	15.8	4.2	chr22	35036126	35036287	(15782181)	+	MLT1A1	LTR/ERVL-MaLR	1	168	(240)	2462118
49	4.0	0.0	0.0	chr22	35036288	35036338	(15782130)	+	(TC)n	Simple_repeat	1	51	(0)	2462119
1384	17.6	15.8	4.2	chr22	35036339	35036532	(15781936)	+	MLT1A1	LTR/ERVL-MaLR	169	405	(3)	2462118
23	25.2	1.4	1.4	chr22	35371884	35371955	(15446513)	+	(CCCGC)n	Simple_repeat	1	73	(0)	2462817
842	24.8	2.7	0.9	chr22	35443884	35444099	(15374369)	+	MIR	SINE/MIR	35	254	(8)	2463007
18	25.3	2.9	2.9	chr22	35444170	35444237	(15374231)	+	A-rich	Low_complexity	1	70	(0)	2463008
43	22.7	2.7	3.9	chr22	35453635	35453795	(15364673)	+	(ACAGAG)n	Simple_repeat	1	159	(0)	2463031
17	0.0	0.0	0.0	chr22	35453800	35453818	(15364650)	+	(AT)n	Simple_repeat	1	19	(0)	2463032
231	28.2	8.4	4.4	chr22	35453819	35454000	(15364468)	+	LTR28B	LTR/ERV1	254	443	(531)	2463033
24	27.4	0.0	1.3	chr22	35454031	35454106	(15364362)	+	GA-rich	Low_complexity	1	76	(0)	2463034
122	25.2	3.2	2.1	chr22	35522582	35522955	(15295513)	+	(CTTT)n	Simple_repeat	1	386	(0)	2463210
244	34.5	2.0	11.9	chr22	35522958	35523125	(15295343)	C	L2c	LINE/L2	(23)	3364	3214	2463211
283	26.3	1.9	0.4	chr22	35593092	35593150	(15225318)	+	GA-rich	Low_complexity	1	667	(103)	2463383
159	33.8	2.0	2.3	chr22	35593151	35593840	(15224628)	+	A-rich	Low_complexity	1	704	(0)	2463384
278	32.4	5.8	0.0	chr22	35593891	35594036	(15224432)	+	MIR3	SINE/MIR	54	206	(2)	2463385
28	8.3	0.0	0.0	chr22	35643334	35643371	(15175097)	+	(AG)n	Simple_repeat	1	38	(0)	2463503
223	27.4	1.7	0.9	chr22	35683404	35684054	(15134414)	+	GA-rich	Low_complexity	1	662	(0)	2463573
17	12.8	0.0	2.8	chr22	35895042	35895077	(14923391)	+	(TCCC)n	Simple_repeat	1	36	(0)	2463927
32	3.2	0.0	0.0	chr22	35895078	35895109	(14923359)	+	(CT)n	Simple_repeat	1	32	(0)	2463928
73	1.5	0.0	0.0	chr22	36703761	36703827	(14114641)	+	(CT)n	Simple_repeat	1	67	(0)	2465663
2187	12.6	0.0	0.0	chr22	37049967	37050259	(13768209)	+	AluSz	SINE/Alu	1	293	(19)	2466402
46	0.0	0.0	0.0	chr22	37050260	37050298	(13768170)	+	(AG)n	Simple_repeat	1	39	(0)	2466403
789	9.7	5.4	8.2	chr22	37050299	37050404	(13768064)	C	FLAM_C	SINE/Alu	(32)	111	1	2466401
328	32.7	7.7	4.0	chr22	37050405	37050579	(13767889)	C	MIRb	SINE/MIR	(46)	222	41	2466404
19	3.6	3.5	0.0	chr22	37125463	37125491	(13692977)	+	(CTAT)n	Simple_repeat	1	30	(0)	2466566
75	0.0	1.5	0.0	chr22	37125517	37125583	(13692885)	+	(GA)n	Simple_repeat	1	68	(0)	2466567
425	25.4	8.2	2.9	chr22	37125638	37125811	(13692657)	+	MER113	DNA/hAT-Charlie	55	238	(283)	2466568
435	31.4	11.6	2.5	chr22	37255519	37255760	(13562708)	+	L1MC4	LINE/L1	963	1229	(4986)	2466824
85	22.5	3.3	0.5	chr22	37255765	37255978	(13562490)	+	GA-rich	Low_complexity	1	221	(0)	2466825
223	27.8	24.2	4.5	chr22	37328581	37328780	(13489688)	+	MIRb	SINE/MIR	9	260	(8)	2466997
254	5.6	1.3	0.0	chr22	37328868	37329168	(13489300)	+	(CT)n	Simple_repeat	1	305	(0)	2466998
23	16.2	2.9	5.6	chr22	37329293	37329322	(13489146)	+	G-rich	Low_complexity	1	45	(27)	2466999
13	16.1	0.0	0.0	chr22	37639434	37639461	(13179007)	+	G-rich	Low_complexity	1	28	(0)	2467706
12	21.6	0.0	0.0	chr22	37639593	37639624	(13178844)	+	G-rich	Low_complexity	1	32	(0)	2467707
12	8.1	3.6	3.5	chr22	37658752	37658779	(13159689)	+	(CGGC)n	Simple_repeat	1	29	(0)	2467752
327	23.9	14.8	0.9	chr22	37661632	37661741	(13156727)	+	L2a	LINE/L2	3297	3424	(2)	2467758
2032	13.2	1.6	0.7	chr22	37685758	37686060	(13132408)	+	AluSz	SINE/Alu	7	312	(0)	2467833
193	23.2	12.5	0.0	chr22	37686095	37686150	(13132318)	C	L2b	LINE/L2	(3)	3423	3360	2467834
30	3.1	0.0	0.0	chr22	37805259	37805291	(13013177)	+	(GAGGCA)n	Simple_repeat	1	33	(0)	2468119
64	20.9	6.4	0.0	chr22	37972023	37972194	(12846274)	+	GA-rich	Low_complexity	1	183	(0)	2468532
544	27.6	11.2	5.7	chr22	38109743	38109969	(12708499)	+	MIR	SINE/MIR	15	255	(7)	2468816
106	8.5	0.0	0.0	chr22	38110025	38110173	(12708295)	+	(GAGAGA)n	Simple_repeat	1	149	(0)	2468817
25	12.7	2.3	0.0	chr22	38607483	38607525	(12210943)	+	GA-rich	Low_complexity	1	44	(0)	2469896
2927	28.6	8.4	3.4	chr22	38924292	38925466	(11893002)	C	Charlie25	DNA/hAT-Charlie	(987)	1537	299	2470543
2252	11.2	2.6	0.0	chr22	39202871	39203174	(11615294)	+	AluSx1	SINE/Alu	1	312	(0)	2471111
28	17.6	0.0	1.9	chr22	39203184	39203217	(11615251)	+	GA-rich	Low_complexity	1	34	(0)	2471112
27	0.0	0.0	0.0	chr22	39203218	39203243	(11615225)	+	(GAAG)n	Simple_repeat	1	26	(0)	2471113
28	17.6	0.0	1.9	chr22	39203244	39203262	(11615206)	+	GA-rich	Low_complexity	35	53	(0)	2471114
501	35.7	4.8	3.5	chr22	39203264	39203629	(11614839)	+	L3	LINE/CR1	2712	3082	(1017)	2471110
288	30.0	13.0	0.7	chr22	39240646	39240786	(11577682)	C	L2a	LINE/L2	(5)	3421	3261	2471182
23	25.6	0.0	3.1	chr22	39240895	39240959	(11577509)	+	(TC)n	Simple_repeat	1	65	(0)	2471183
61	5.1	2.3	2.3	chr22	39243211	39243296	(11575172)	+	(TC)n	Simple_repeat	1	88	(0)	2471185
2036	6.4	4.8	6.7	chr22	39320326	39320622	(11497846)	C	AluSx3	SINE/Alu	(20)	291	1	2471359
18	28.3	4.6	1.1	chr22	39456974	39457060	(11361408)	+	(CGCA)n	Simple_repeat	1	91	(0)	2471690
12	17.5	3.1	0.0	chr22	39498642	39498673	(11319795)	+	G-rich	Low_complexity	1	33	(0)	2471773
2175	23.2	6.5	5.5	chr22	40155586	40155922	(10662546)	C	L1ME3D	LINE/L1	(662)	5580	5230	2473026
12	0.0	0.0	8.3	chr22	40636245	40636268	(10182200)	+	(CGCC)n	Simple_repeat	1	24	(0)	2473971
1735	13.8	0.0	12.7	chr22	40711464	40711683	(10106785)	+	AluJr4	SINE/Alu	123	303	(9)	2474168
257	27.6	18.1	1.6	chr22	40711687	40711870	(10106598)	+	LTR81A	LTR/Gypsy	933	1153	(0)	2474166
36	0.0	0.0	0.0	chr22	40727443	40727473	(10090995)	+	(GA)n	Simple_repeat	1	31	(0)	2474213
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
22	17.4	5.2	0.0	chr22	41544391	41544448	(9274020)	+	(CGCACCA)n	Simple_repeat	1	61	(0)	2476154
219	32.2	4.8	2.5	chr22	41544685	41544805	(9273663)	+	L2	LINE/L2	2721	2844	(575)	2476155
29	0.0	0.0	0.0	chr22	41958484	41958508	(8859960)	+	(GA)n	Simple_repeat	1	25	(0)	2477141
221	25.0	0.0	1.9	chr22	42614368	42614420	(8204048)	+	MIRc	SINE/MIR	97	148	(120)	2478498
1129	24.2	9.8	1.7	chr22	42965064	42965420	(7853048)	+	L1ME1	LINE/L1	5777	6165	(14)	2479271
37	0.0	2.5	2.4	chr22	43392780	43392819	(7425649)	+	(GA)n	Simple_repeat	1	41	(0)	2480151
290	31.3	12.2	1.5	chr22	43392885	43393046	(7425422)	C	MIRb	SINE/MIR	(7)	223	43	2480152
387	15.7	4.4	0.0	chr22	43432205	43432969	(7385499)	+	GA-rich	Low_complexity	1	799	(0)	2480226
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
1684	14.7	4.7	2.6	chr22	44122211	44122483	(6695985)	+	AluJb	SINE/Alu	2	280	(32)	2481398
117	4.2	0.0	0.0	chr22	44122489	44122610	(6695858)	+	(AG)n	Simple_repeat	1	122	(0)	2481399
1978	29.6	7.3	2.4	chr22	44122611	44122974	(6695494)	C	L1MC5a	LINE/L1	(1962)	815	428	2481397
43	26.5	4.8	1.7	chr22	44332061	44332385	(6486083)	+	(CT)n	Simple_repeat	1	335	(0)	2481781
2153	17.1	9.0	6.8	chr22	44565618	44565810	(6252658)	+	MLT2B2	LTR/ERVL	1	231	(284)	2482209
60	7.1	0.0	0.0	chr22	44565811	44565884	(6252584)	+	(TC)n	Simple_repeat	1	74	(0)	2482210
2153	17.1	9.0	6.8	chr22	44565885	44566178	(6252290)	+	MLT2B2	LTR/ERVL	232	500	(15)	2482209
2340	8.9	0.7	0.7	chr22	44665680	44665976	(6152492)	+	AluSq	SINE/Alu	2	299	(14)	2482379
50	2.2	0.0	0.0	chr22	44665977	44666023	(6152445)	+	(AG)n	Simple_repeat	1	47	(0)	2482380
4723	14.8	4.4	1.6	chr22	44666047	44666952	(6151516)	+	L1MD1	LINE/L1	5300	6233	(9)	2482381
1053	22.7	1.1	8.6	chr22	45097035	45097351	(5721117)	+	MSTD	LTR/ERVL-MaLR	1	298	(130)	2483240
2643	8.6	1.1	1.9	chr22	45097352	45097717	(5720751)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	2483241
15	10.0	2.9	2.9	chr22	45309983	45310022	(5508446)	+	(CGCTCT)n	Simple_repeat	1	40	(0)	2483679
2046	13.5	4.8	0.0	chr22	45524803	45525099	(5293369)	+	AluSx	SINE/Alu	1	312	(0)	2484115
63	18.7	1.4	2.7	chr22	45525100	45525237	(5293231)	+	A-rich	Low_complexity	10	145	(0)	2484116
749	17.9	0.0	0.0	chr22	45525238	45525354	(5293114)	C	AluJb	SINE/Alu	(195)	117	1	2484117
350	33.1	4.9	5.9	chr22	46063898	46064083	(4754385)	+	MIRc	SINE/MIR	85	268	(0)	2484970
1816	13.0	5.3	0.0	chr22	46173923	46174191	(4644277)	+	AluYc	SINE/Alu	1	284	(15)	2485118
37	9.8	0.0	0.0	chr22	46174192	46174247	(4644221)	+	(GAGA)n	Simple_repeat	1	56	(0)	2485119
28	0.0	0.0	0.0	chr22	46174250	46174276	(4644192)	+	(GAAG)n	Simple_repeat	1	27	(0)	2485120
283	19.1	5.2	2.7	chr22	46174280	46174404	(4644064)	+	L1MC4	LINE/L1	7833	8042	(0)	2485117
13	16.2	0.0	0.0	chr22	46267610	46267637	(4550831)	+	(CAGGC)n	Simple_repeat	1	28	(0)	2485276
14	7.1	2.9	5.7	chr22	46762864	46762897	(4055571)	+	G-rich	Low_complexity	1	35	(0)	2486028
32	4.9	2.3	0.0	chr22	47042402	47042444	(3776024)	+	(GA)n	Simple_repeat	1	44	(0)	2486367
179	23.8	2.3	0.2	chr22	47191610	47192044	(3626424)	+	GA-rich	Low_complexity	1	445	(0)	2486515
41	21.5	2.3	4.5	chr22	48633444	48633494	(2184974)	+	(CT)n	Simple_repeat	1	51	(0)	2488455
45	0.0	0.0	0.0	chr22	48633495	48633535	(2184933)	+	(TGTC)n	Simple_repeat	1	41	(0)	2488456
41	21.5	2.3	4.5	chr22	48633536	48633614	(2184854)	+	(CT)n	Simple_repeat	2	77	(0)	2488457
51	3.9	0.0	0.0	chr22	49091088	49091140	(1727328)	+	(CT)n	Simple_repeat	1	53	(0)	2488973
13	24.9	2.0	2.0	chr22	49918663	49918711	(899757)	+	(GGCG)n	Simple_repeat	1	50	(0)	2489964
14	24.1	3.7	5.9	chr22	49918754	49918792	(899676)	+	(CGCCG)n	Simple_repeat	1	68	(17)	2489965
16	19.5	0.0	0.0	chr22	49918793	49918827	(899641)	+	(GCT)n	Simple_repeat	1	35	(0)	2489966
14	24.1	3.7	5.9	chr22	49918828	49918835	(899633)	+	(CGCCG)n	Simple_repeat	69	85	(0)	2489965
1934	14.1	5.2	1.0	chr22	49984908	49985204	(833264)	+	AluSx	SINE/Alu	2	311	(1)	2490030
8363	18.1	4.2	7.8	chr22	49985205	49987222	(831246)	C	L1M4	LINE/L1	(1067)	5079	3143	2490028
1613	18.1	1.3	6.4	chr22	50614160	50614470	(203998)	+	AluJo	SINE/Alu	3	296	(16)	2490954
47	2.3	0.0	0.0	chr22	50614471	50614515	(203953)	+	(AG)n	Simple_repeat	1	45	(0)	2490955
1613	18.1	1.3	6.4	chr22	50614516	50614530	(203938)	+	AluJo	SINE/Alu	297	311	(1)	2490954
569	26.4	5.9	5.9	chr3	3604225	3604494	(194691065)	C	MLT1H	LTR/ERVL-MaLR	(249)	300	31	2497695
41	0.0	0.0	0.0	chr3	3604512	3604546	(194691013)	+	(CT)n	Simple_repeat	1	35	(0)	2497696
32	11.7	0.0	0.0	chr3	3604547	3604594	(194690965)	+	(AC)n	Simple_repeat	1	48	(0)	2497697
1197	32.4	4.9	4.0	chr3	3604613	3605140	(194690419)	+	MLT1K	LTR/ERVL-MaLR	26	558	(37)	2497698
1616	18.9	11.0	3.5	chr3	4320355	4320995	(193974564)	C	LTR48	LTR/ERV1	(2)	785	1	2498802
13	0.0	4.3	4.2	chr3	4467162	4467184	(193828375)	+	(CAG)n	Simple_repeat	1	24	(0)	2499047
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
34	3.0	0.0	0.0	chr3	4898969	4899002	(193396557)	+	(GA)n	Simple_repeat	1	34	(0)	2499756
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
228	28.4	1.3	7.5	chr3	5236448	5236527	(193059032)	C	L2a	LINE/L2	(40)	3386	3312	2500459
45	2.4	0.0	0.0	chr3	5236533	5236575	(193058984)	+	(AG)n	Simple_repeat	1	43	(0)	2500460
276	29.4	7.4	5.6	chr3	7291328	7291489	(191004070)	C	MLT1L	LTR/ERVL-MaLR	(136)	474	307	2503571
76	0.0	0.0	0.0	chr3	7291490	7291554	(191004005)	+	(CT)n	Simple_repeat	1	65	(0)	2503572
276	29.4	7.4	5.6	chr3	7291555	7291604	(191003955)	C	MLT1L	LTR/ERVL-MaLR	(304)	306	258	2503571
78	2.9	6.4	0.9	chr3	8737974	8738082	(189557477)	+	(CT)n	Simple_repeat	1	116	(0)	2505862
287	22.9	2.8	0.0	chr3	9142620	9142689	(189152870)	+	MIR3	SINE/MIR	54	125	(83)	2506594
472	27.9	10.5	1.3	chr3	9194592	9194747	(189100812)	C	MIR3	SINE/MIR	(22)	186	15	2506699
1519	19.3	7.2	2.5	chr3	9268125	9268296	(189027263)	+	MLT1A	LTR/ERVL-MaLR	1	189	(185)	2506849
44	5.1	4.8	0.0	chr3	9268297	9268358	(189027201)	+	(TC)n	Simple_repeat	1	65	(0)	2506850
1519	19.3	7.2	2.5	chr3	9268359	9268541	(189027018)	+	MLT1A	LTR/ERVL-MaLR	190	374	(0)	2506849
47	4.3	0.0	0.0	chr3	9562401	9562449	(188733110)	+	(AG)n	Simple_repeat	1	49	(0)	2507455
11081	11.1	5.9	6.2	chr3	9640221	9640523	(188655036)	C	HUERS-P1-int	LTR/ERV1	(4729)	1534	1223	2507633
43	0.0	0.0	0.0	chr3	9640524	9640560	(188654999)	+	(AG)n	Simple_repeat	1	37	(0)	2507651
11081	11.1	5.9	6.2	chr3	9640561	9641559	(188654000)	C	HUERS-P1-int	LTR/ERV1	(5041)	1222	175	2507633
17	10.4	7.0	2.2	chr3	9769950	9769992	(188525567)	+	(GGCTC)n	Simple_repeat	1	46	(0)	2507909
27	0.0	2.6	5.1	chr3	9952144	9952181	(188343378)	+	(CTC)n	Simple_repeat	1	39	(0)	2508332
12	21.5	7.1	1.7	chr3	10248718	10248773	(188046786)	+	(CGGCGCC)n	Simple_repeat	1	60	(0)	2509045
38	0.0	0.0	0.0	chr3	10356965	10356997	(187938562)	+	(GA)n	Simple_repeat	1	33	(0)	2509244
249	27.0	1.6	1.6	chr3	10357048	10357111	(187938448)	C	L2b	LINE/L2	(0)	3375	3312	2509245
75	10.2	0.0	0.0	chr3	10606913	10607019	(187688540)	+	(AG)n	Simple_repeat	1	107	(0)	2509754
231	32.7	6.5	0.0	chr3	10607043	10607143	(187688416)	C	LTR90B	LTR	(554)	242	135	2509755
20	22.8	0.0	13.2	chr3	10673389	10673517	(187622042)	+	GA-rich	Low_complexity	1	109	(0)	2509861
2082	15.1	0.0	2.2	chr3	10673518	10673836	(187621723)	+	AluJb	SINE/Alu	1	312	(0)	2509862
227	27.7	2.4	5.7	chr3	11495988	11496075	(186799484)	C	MIR	SINE/MIR	(79)	183	99	2511556
13	22.4	0.0	4.4	chr3	11719351	11719395	(186576164)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2511932
1787	14.7	2.4	6.2	chr3	12233339	12233645	(186061914)	+	AluJo	SINE/Alu	1	295	(17)	2512901
36	2.9	0.0	0.0	chr3	12233648	12233682	(186061877)	+	(AG)n	Simple_repeat	1	35	(0)	2512902
36	0.0	0.0	0.0	chr3	12233705	12233735	(186061824)	+	(AC)n	Simple_repeat	1	31	(0)	2512903
765	10.8	0.8	0.8	chr3	12263426	12263547	(186032012)	C	L1MA1	LINE/L1	(0)	6302	6181	2512961
47	0.0	0.0	0.0	chr3	12263591	12263630	(186031929)	+	(TC)n	Simple_repeat	1	40	(0)	2512962
1868	11.8	0.4	0.0	chr3	12660696	12660941	(185634618)	+	AluSg4	SINE/Alu	2	248	(62)	2513755
91	8.7	4.8	0.0	chr3	12719628	12719774	(185575785)	+	(GA)n	Simple_repeat	1	154	(0)	2513926
430	9.6	1.4	0.0	chr3	12758003	12758075	(185537484)	+	L1MB7	LINE/L1	6111	6184	(0)	2514036
16	7.7	3.6	0.0	chr3	12758077	12758104	(185537455)	+	(AAAG)n	Simple_repeat	1	29	(0)	2514037
198	30.0	7.0	5.9	chr3	12758107	12758191	(185537368)	+	MIRb	SINE/MIR	163	248	(20)	2514032
307	26.3	10.8	0.0	chr3	12796307	12796405	(185499154)	C	MIRc	SINE/MIR	(127)	141	31	2514131
308	21.9	11.0	0.9	chr3	12995200	12995305	(185300254)	+	MIR3	SINE/MIR	5	122	(86)	2514434
74	23.7	0.6	0.0	chr3	13264802	13264978	(185030581)	+	(TCTCTC)n	Simple_repeat	1	178	(0)	2514932
12	26.1	0.0	0.0	chr3	13419716	13419752	(184875807)	+	G-rich	Low_complexity	1	37	(0)	2515200
232	25.9	13.6	1.8	chr3	13599901	13600010	(184695549)	C	L2a	LINE/L2	(1096)	2323	2199	2515594
59	4.9	0.0	0.0	chr3	13600018	13600081	(184695478)	+	(AG)n	Simple_repeat	1	64	(0)	2515596
445	26.8	1.3	2.2	chr3	13868504	13869749	(184425810)	+	GA-rich	Low_complexity	11	1246	(0)	2516059
669	26.0	11.4	4.6	chr3	14685035	14685418	(183610141)	+	L1ME3C	LINE/L1	5706	6118	(5)	2517448
38	4.9	0.0	0.0	chr3	14685440	14685481	(183610078)	+	(CT)n	Simple_repeat	1	42	(0)	2517450
19	11.6	0.0	0.0	chr3	14685482	14685510	(183610049)	+	(GT)n	Simple_repeat	1	29	(0)	2517451
4823	14.2	2.3	2.9	chr3	14685511	14685851	(183609708)	C	L1MA9	LINE/L1	(153)	6159	5833	2517452
499	21.1	9.2	0.1	chr3	14826124	14826263	(183469296)	C	L1ME2z	LINE/L1	(3)	6441	6318	2517674
17	23.7	4.4	2.8	chr3	14947927	14947994	(183347565)	+	(GGC)n	Simple_repeat	1	71	(0)	2517904
34	2.6	2.4	2.3	chr3	15115089	15115130	(183180429)	+	(CT)n	Simple_repeat	1	43	(0)	2518209
29	16.4	1.6	1.6	chr3	15332284	15332346	(182963213)	+	(TCC)n	Simple_repeat	1	64	(0)	2518597
13	11.9	0.0	6.2	chr3	15332634	15332665	(182962894)	+	(CCCGC)n	Simple_repeat	1	32	(0)	2518598
4506	7.0	3.8	0.2	chr3	15364053	15364635	(182930924)	+	LTR14B	LTR/ERVK	4	608	(0)	2518675
31	0.0	0.0	0.0	chr3	15406631	15406664	(182888895)	+	(GA)n	Simple_repeat	1	34	(0)	2518770
1746	14.4	6.4	0.4	chr3	15406665	15406928	(182888631)	C	AluSx1	SINE/Alu	(30)	282	2	2518771
46	0.0	0.0	0.0	chr3	15850225	15850263	(182445296)	+	(AG)n	Simple_repeat	1	39	(0)	2519498
1346	15.6	0.7	9.6	chr3	15850264	15850337	(182445222)	+	L1MB7	LINE/L1	4951	5026	(1120)	2519496
490	20.4	19.2	4.7	chr3	15850347	15850536	(182445023)	C	MLT1C	LTR/ERVL-MaLR	(0)	505	282	2519499
32	7.7	0.0	0.0	chr3	15960706	15960746	(182334813)	+	(TC)n	Simple_repeat	1	41	(0)	2519712
221	34.1	9.4	2.2	chr3	16387496	16387570	(181907989)	+	L2a	LINE/L2	1666	1740	(1679)	2520409
48	0.0	0.0	0.0	chr3	16387571	16387611	(181907948)	+	(TC)n	Simple_repeat	1	41	(0)	2520410
19	24.6	2.0	0.0	chr3	16445285	16445338	(181850221)	+	GA-rich	Low_complexity	1	55	(0)	2520513
39	20.4	3.0	1.0	chr3	16445393	16445483	(181850076)	+	(TC)n	Simple_repeat	1	93	(0)	2520514
44	0.0	0.0	0.0	chr3	16445484	16445521	(181850038)	+	(CA)n	Simple_repeat	1	38	(0)	2520515
1534	14.9	4.3	1.3	chr3	16445533	16445844	(181849715)	+	MER33	DNA/hAT-Charlie	3	324	(0)	2520516
2202	16.1	2.7	0.3	chr3	16533843	16534209	(181761350)	C	MSTB1	LTR/ERVL-MaLR	(40)	392	17	2520660
257	8.6	0.0	0.0	chr3	16534229	16534263	(181761296)	C	MSTB1	LTR/ERVL-MaLR	(379)	53	19	2520660
264	11.6	2.3	0.0	chr3	16534257	16534299	(181761260)	C	MSTB1	LTR/ERVL-MaLR	(412)	53	10	2520660
1300	21.2	1.9	15.2	chr3	16641250	16641682	(181653877)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2520829
345	7.0	0.0	0.0	chr3	17411736	17411778	(180883781)	C	MER124	DNA?	(89)	308	266	2521834
20	4.2	0.0	0.0	chr3	17551053	17551077	(180744482)	+	(TG)n	Simple_repeat	1	25	(0)	2522022
717	27.8	1.4	1.4	chr3	17553285	17553492	(180742067)	+	L1MC5a	LINE/L1	174	381	(2396)	2522026
982	32.8	6.9	1.9	chr3	17730256	17730736	(180564823)	+	MLT1G1	LTR/ERVL-MaLR	73	579	(0)	2522279
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
28077	7.3	2.3	1.3	chr3	17774942	17780880	(180514679)	+	HERV9-int	LTR/ERV1	1	4879	(3557)	2522371
41	0.0	0.0	0.0	chr3	17928945	17928979	(180366580)	+	(CT)n	Simple_repeat	1	35	(0)	2522605
1806	23.7	10.9	2.5	chr3	18292815	18292988	(180002571)	+	MLT1F1	LTR/ERVL-MaLR	1	187	(382)	2523138
59	1.8	0.0	0.0	chr3	18292989	18293043	(180002516)	+	(TC)n	Simple_repeat	1	55	(0)	2523139
1806	23.7	10.9	2.5	chr3	18293044	18293388	(180002171)	+	MLT1F1	LTR/ERVL-MaLR	188	569	(0)	2523138
2004	14.6	0.3	0.3	chr3	18305171	18305457	(179990102)	C	AluSx	SINE/Alu	(24)	288	2	2523149
16	20.8	2.3	0.0	chr3	18305461	18305504	(179990055)	+	(ATTTT)n	Simple_repeat	1	45	(0)	2523150
81	1.3	1.3	0.0	chr3	18305530	18305606	(179989953)	+	(TC)n	Simple_repeat	1	78	(0)	2523151
36	22.6	4.0	2.3	chr3	18425062	18425128	(179870431)	+	(GCCGCT)n	Simple_repeat	1	108	(21)	2523268
21	20.8	0.0	0.0	chr3	18425129	18425174	(179870385)	+	(GCT)n	Simple_repeat	1	46	(0)	2523269
36	22.6	4.0	2.3	chr3	18425175	18425185	(179870374)	+	(GCCGCT)n	Simple_repeat	109	129	(0)	2523268
14	18.1	5.4	5.1	chr3	18425215	18425220	(179870339)	+	(CCG)n	Simple_repeat	1	57	(0)	2523270
15	25.6	2.0	0.0	chr3	18425221	18425271	(179870288)	+	(GCCCGCA)n	Simple_repeat	1	52	(0)	2523271
27	20.5	3.3	4.3	chr3	18425323	18425413	(179870146)	+	GA-rich	Low_complexity	1	94	(0)	2523272
18	15.9	0.0	0.0	chr3	18444724	18444758	(179850801)	+	(GCC)n	Simple_repeat	1	35	(0)	2523289
19	3.3	3.0	2.9	chr3	18444826	18444858	(179850701)	+	(GAGC)n	Simple_repeat	1	34	(0)	2523290
34	29.0	0.7	4.6	chr3	18444859	18444970	(179850589)	+	G-rich	Low_complexity	6	151	(0)	2523291
110	16.8	5.7	1.1	chr3	19934289	19934551	(178361008)	+	(TC)n	Simple_repeat	1	278	(0)	2525330
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
30	3.5	0.0	0.0	chr3	20096950	20096979	(178198580)	+	(AG)n	Simple_repeat	1	30	(0)	2525675
32	10.1	3.8	0.0	chr3	20099760	20099812	(178195747)	+	(AG)n	Simple_repeat	1	55	(0)	2525679
306	20.7	1.7	0.0	chr3	22962284	22962341	(175333218)	C	MLT1K	LTR/ERVL-MaLR	(3)	592	534	2529444
63	6.3	2.4	0.0	chr3	22962399	22962481	(175333078)	+	(TC)n	Simple_repeat	1	85	(0)	2529445
1826	14.1	3.0	0.3	chr3	23672433	23672722	(174622837)	C	AluJb	SINE/Alu	(13)	299	2	2530508
20	19.7	2.4	0.0	chr3	23672723	23672782	(174622777)	+	(CT)n	Simple_repeat	1	61	(0)	2530509
1436	16.9	11.0	0.8	chr3	23672783	23673043	(174622516)	C	AluJb	SINE/Alu	(16)	296	6	2530510
739	25.2	15.6	4.3	chr3	23691582	23691736	(174603823)	C	MLT1F2	LTR/ERVL-MaLR	(173)	375	171	2530547
34	0.0	0.0	0.0	chr3	23691737	23691765	(174603794)	+	(AG)n	Simple_repeat	1	29	(0)	2530548
860	21.1	2.3	0.6	chr3	23691766	23691937	(174603622)	C	MLT1F2	LTR/ERVL-MaLR	(382)	178	4	2530547
14141	14.0	2.4	4.7	chr3	23719754	23720199	(174575360)	C	L1MC	LINE/L1	(2924)	3222	2763	2530606
104	15.3	1.9	2.7	chr3	23720200	23720414	(174575145)	+	(CTTT)n	Simple_repeat	1	219	(0)	2530615
987	5.7	0.0	4.0	chr3	23720418	23720541	(174575018)	C	AluSz	SINE/Alu	(193)	119	1	2530616
2273	11.0	0.3	0.0	chr3	23736739	23737039	(174558520)	+	AluSx	SINE/Alu	1	302	(10)	2530657
712	30.2	7.5	10.4	chr3	23737040	23737063	(174558496)	+	HAL1ME	LINE/L1	1325	1325	(1140)	2530656
2097	13.2	0.0	0.3	chr3	23737064	23737365	(174558194)	C	AluSq10	SINE/Alu	(10)	303	3	2530658
181	35.3	2.5	7.8	chr3	23836815	23836943	(174458616)	C	L2c	LINE/L2	(0)	3387	3266	2530862
870	20.4	9.2	0.0	chr3	23836972	23837187	(174458372)	+	MIR	SINE/MIR	4	241	(21)	2530863
18	6.0	8.6	0.0	chr3	23945493	23945527	(174350032)	+	(CGG)n	Simple_repeat	1	38	(0)	2531074
15	9.8	0.0	0.0	chr3	23946025	23946046	(174349513)	+	(GC)n	Simple_repeat	1	22	(0)	2531076
2184	22.0	3.8	13.5	chr3	24001944	24002324	(174293235)	C	MLT2B3	LTR/ERVL	(0)	554	232	2531180
31	0.0	0.0	0.0	chr3	24002325	24002351	(174293208)	+	(AC)n	Simple_repeat	1	27	(0)	2531181
2184	22.0	3.8	13.5	chr3	24002352	24002583	(174292976)	C	MLT2B3	LTR/ERVL	(323)	231	3	2531180
689	30.7	3.1	3.1	chr3	24482214	24482435	(173813124)	C	MIRb	SINE/MIR	(0)	268	47	2531943
30	0.0	0.0	0.0	chr3	24482484	24482511	(173813048)	+	(ATTC)n	Simple_repeat	1	28	(0)	2531944
41	2.6	0.0	0.0	chr3	24482534	24482573	(173812986)	+	(TC)n	Simple_repeat	1	40	(0)	2531945
12	20.4	0.0	0.0	chr3	24491990	24492018	(173803541)	+	A-rich	Low_complexity	1	29	(0)	2531961
16	13.7	0.0	0.0	chr3	24492048	24492072	(173803487)	+	(AC)n	Simple_repeat	1	25	(0)	2531962
615	31.5	3.6	7.6	chr3	24492156	24492498	(173803061)	C	L2a	LINE/L2	(0)	3426	3098	2531963
13	23.8	2.2	2.1	chr3	24495068	24495113	(173800446)	+	(CCCCG)n	Simple_repeat	1	47	(0)	2531965
749	18.8	23.4	1.7	chr3	24644339	24644409	(173651150)	C	L1MC4	LINE/L1	(0)	8042	7915	2532187
39	4.5	2.2	0.0	chr3	24644410	24644455	(173651104)	+	(TC)n	Simple_repeat	1	47	(0)	2532188
46	0.0	0.0	0.0	chr3	24966607	24966645	(173328914)	+	(TC)n	Simple_repeat	1	39	(0)	2532703
16	14.2	0.0	0.0	chr3	27484180	27484224	(170811335)	+	(CTGCCG)n	Simple_repeat	1	45	(0)	2536145
16	27.1	4.5	3.2	chr3	27484236	27484324	(170811235)	+	(CGTG)n	Simple_repeat	1	93	(0)	2536146
168	8.7	4.3	0.7	chr3	28865350	28865627	(169429932)	+	(CTTT)n	Simple_repeat	1	290	(0)	2538403
1759	25.1	2.3	2.5	chr3	29229753	29230378	(169065181)	C	L1ME1	LINE/L1	(16)	6168	5487	2538871
36	5.2	0.0	0.0	chr3	29230386	29230425	(169065134)	+	(TC)n	Simple_repeat	1	40	(0)	2538872
1137	20.1	6.0	1.0	chr3	29230442	29230645	(169064914)	C	AluJb	SINE/Alu	(96)	216	2	2538873
40	0.0	0.0	0.0	chr3	29438029	29438062	(168857497)	+	(TC)n	Simple_repeat	1	34	(0)	2539172
55	4.8	1.6	0.0	chr3	29627252	29627315	(168668244)	+	(TC)n	Simple_repeat	1	65	(0)	2539452
802	16.2	15.1	4.6	chr3	29627337	29627530	(168668029)	C	MER20	DNA/hAT-Charlie	(0)	219	2	2539453
56	0.0	0.0	0.0	chr3	29884423	29884470	(168411089)	+	(TC)n	Simple_repeat	1	48	(0)	2539794
15	8.5	0.0	0.0	chr3	29884473	29884497	(168411062)	+	(CCCT)n	Simple_repeat	1	25	(0)	2539795
13	14.9	2.3	6.8	chr3	30606765	30606807	(167688752)	+	(GCGCG)n	Simple_repeat	1	44	(0)	2540793
1143	33.5	6.4	2.5	chr3	30613230	30613525	(167682034)	+	MER115	DNA/hAT-Tip100	35	356	(337)	2540803
44	4.4	0.0	0.0	chr3	30613526	30613572	(167681987)	+	(GA)n	Simple_repeat	1	47	(0)	2540804
1143	33.5	6.4	2.5	chr3	30613573	30613908	(167681651)	+	MER115	DNA/hAT-Tip100	357	692	(1)	2540803
919	30.3	1.6	0.4	chr3	31165676	31165920	(167129639)	C	MIR	SINE/MIR	(0)	262	15	2541649
68	0.0	0.0	0.0	chr3	31216580	31216637	(167078922)	+	(TC)n	Simple_repeat	1	58	(0)	2541719
2105	17.6	0.7	7.0	chr3	31286567	31286930	(167008629)	+	MLT2D	LTR/ERVL	1	352	(62)	2541857
46	0.0	0.0	0.0	chr3	31286931	31286969	(167008590)	+	(AG)n	Simple_repeat	1	39	(0)	2541858
26	0.0	0.0	0.0	chr3	31286975	31286999	(167008560)	+	(AGAC)n	Simple_repeat	1	25	(0)	2541859
2105	17.6	0.7	7.0	chr3	31287000	31287068	(167008491)	+	MLT2D	LTR/ERVL	353	412	(2)	2541857
12	21.3	4.4	2.1	chr3	31981009	31981053	(166314506)	+	(GCC)n	Simple_repeat	1	47	(0)	2542976
18	7.8	0.0	0.0	chr3	31981114	31981140	(166314419)	+	(GCT)n	Simple_repeat	1	27	(0)	2542977
12	13.7	0.0	0.0	chr3	31981233	31981256	(166314303)	+	(GCT)n	Simple_repeat	1	24	(0)	2542978
33	5.7	0.0	0.0	chr3	32891853	32891889	(165403670)	+	(TC)n	Simple_repeat	1	37	(0)	2544892
16	9.6	0.0	0.0	chr3	32891925	32891947	(165403612)	+	(T)n	Simple_repeat	1	23	(0)	2544893
539	17.5	12.9	20.2	chr3	33099105	33099441	(165196118)	+	L1MC4	LINE/L1	7732	8040	(2)	2545284
24	19.1	3.2	1.5	chr3	33114003	33114065	(165181494)	+	(CCTT)n	Simple_repeat	1	65	(0)	2545324
14	15.9	0.0	0.0	chr3	33426304	33426331	(164869228)	+	(CAG)n	Simple_repeat	1	28	(0)	2545839
2684	16.5	7.2	3.8	chr3	33426423	33426964	(164868595)	C	L1MB7	LINE/L1	(9)	6175	5606	2545840
1841	22.3	5.4	16.1	chr3	33972803	33973434	(164322125)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2546765
19	7.3	3.5	0.0	chr3	35829933	35829961	(162465598)	+	(GT)n	Simple_repeat	1	30	(0)	2549152
59	0.0	0.0	0.0	chr3	35830086	35830135	(162465424)	+	(TC)n	Simple_repeat	1	50	(0)	2549153
13	20.1	0.0	6.5	chr3	35830142	35830187	(162465372)	+	(CCTC)n	Simple_repeat	1	46	(0)	2549154
543	25.7	11.1	0.4	chr3	36701550	36701830	(161593729)	+	Charlie29a	DNA/hAT-Charlie	331	645	(74)	2550263
70	3.0	0.0	0.0	chr3	36701850	36701918	(161593641)	+	(CT)n	Simple_repeat	1	69	(0)	2550264
21	22.0	0.0	5.6	chr3	36764214	36764284	(161531275)	+	G-rich	Low_complexity	1	71	(0)	2550363
25	21.1	0.0	1.6	chr3	36764397	36764459	(161531100)	+	(CCGCCCG)n	Simple_repeat	1	61	(0)	2550364
56	3.6	0.0	0.0	chr3	37829326	37829382	(160466177)	+	(TC)n	Simple_repeat	1	57	(0)	2552139
783	14.9	0.0	0.7	chr3	37829389	37829523	(160466036)	C	L1ME2z	LINE/L1	(10)	6434	6301	2552140
1569	8.4	0.9	2.3	chr3	37848717	37848931	(160446628)	C	AluSz6	SINE/Alu	(18)	294	83	2552165
56	2.0	0.0	0.0	chr3	37848937	37848988	(160446571)	+	(CT)n	Simple_repeat	1	52	(0)	2552166
14	5.0	0.0	0.0	chr3	39153565	39153585	(159141974)	+	(CGG)n	Simple_repeat	1	21	(0)	2554043
43	0.0	0.0	2.4	chr3	40371790	40371830	(157923729)	+	(GA)n	Simple_repeat	1	41	(0)	2555837
43	10.6	0.0	2.7	chr3	40591002	40591076	(157704483)	+	(GAGAGA)n	Simple_repeat	1	75	(0)	2556262
769	26.4	13.4	6.1	chr3	40591091	40591391	(157704168)	C	MLT1K	LTR/ERVL-MaLR	(82)	513	184	2556263
67	1.6	0.0	0.0	chr3	40614840	40614901	(157680658)	+	(GA)n	Simple_repeat	1	62	(0)	2556309
2433	9.0	0.0	3.1	chr3	42196526	42196847	(156098712)	C	AluSx	SINE/Alu	(0)	312	1	2558716
623	24.7	2.1	7.5	chr3	42196848	42196933	(156098626)	+	Charlie4a	DNA/hAT-Charlie	201	282	(226)	2558715
49	5.1	3.2	0.0	chr3	42196942	42197003	(156098556)	+	(TC)n	Simple_repeat	1	64	(0)	2558717
33	0.0	0.0	0.0	chr3	42197004	42197039	(156098520)	+	(AC)n	Simple_repeat	1	36	(0)	2558718
373	20.4	7.7	6.1	chr3	42197065	42197179	(156098380)	+	Charlie4	DNA/hAT-Charlie	1841	1957	(4)	2558719
225	13.3	21.1	0.0	chr3	45058066	45058109	(153237450)	C	LTR37B	LTR/ERV1	(212)	256	201	2563139
302	26.2	10.6	9.5	chr3	45058145	45058219	(153237340)	C	MLT2B4	LTR/ERVL	(0)	556	496	2563141
42	4.6	0.0	0.0	chr3	45058220	45058264	(153237295)	+	(AG)n	Simple_repeat	1	45	(0)	2563142
302	26.2	10.6	9.5	chr3	45058265	45058289	(153237270)	C	MLT2B4	LTR/ERVL	(61)	495	473	2563141
2345	10.0	0.0	0.0	chr3	45058290	45058588	(153236971)	+	AluSg	SINE/Alu	1	299	(11)	2563143
16	0.0	0.0	0.0	chr3	45210765	45210782	(153084777)	+	(CT)n	Simple_repeat	1	18	(0)	2563443
16	16.8	0.0	0.0	chr3	45210793	45210820	(153084739)	+	(GT)n	Simple_repeat	1	28	(0)	2563444
360	21.5	10.6	0.0	chr3	45442050	45442142	(152853417)	+	Eulor9A	DNA	173	276	(25)	2563849
387	29.1	12.3	5.4	chr3	45472693	45472932	(152822627)	+	MIRb	SINE/MIR	4	262	(0)	2563893
435	25.8	13.1	8.2	chr3	46404085	46404220	(151891339)	+	L4_C_Mam	LINE/RTE-X	4662	4795	(343)	2565339
36	0.0	0.0	0.0	chr3	46404298	46404328	(151891231)	+	(TC)n	Simple_repeat	1	31	(0)	2565341
2279	11.7	0.0	1.0	chr3	46404329	46404636	(151890923)	C	AluSx1	SINE/Alu	(6)	306	2	2565342
28	0.0	3.3	0.0	chr3	46883357	46883386	(151412173)	+	(CGCT)n	Simple_repeat	1	31	(0)	2566064
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
17	24.5	1.5	4.3	chr3	47164059	47164126	(151131433)	+	(TCCC)n	Simple_repeat	1	69	(0)	2566543
59	0.0	0.0	0.0	chr3	47600999	47601048	(150694511)	+	(GA)n	Simple_repeat	1	50	(0)	2567525
22	10.4	0.0	0.0	chr3	47601111	47601142	(150694417)	+	(T)n	Simple_repeat	1	32	(0)	2567526
1654	18.4	0.0	2.1	chr3	47749379	47749661	(150545898)	+	AluJb	SINE/Alu	1	277	(35)	2567851
20	23.4	0.0	3.7	chr3	47749671	47749724	(150545835)	+	(AC)n	Simple_repeat	1	54	(0)	2567852
38	4.9	0.0	0.0	chr3	47749725	47749766	(150545793)	+	(AG)n	Simple_repeat	1	42	(0)	2567853
2376	7.9	0.0	0.0	chr3	47749811	47750100	(150545459)	+	AluY	SINE/Alu	11	300	(11)	2567854
2254	11.9	0.7	0.0	chr3	48893879	48894180	(149401379)	+	AluSx	SINE/Alu	1	304	(8)	2570207
42	0.0	0.0	0.0	chr3	48894184	48894219	(149401340)	+	(TC)n	Simple_repeat	1	36	(0)	2570208
2065	10.5	0.0	2.3	chr3	49429415	49429719	(148865840)	C	AluSx1	SINE/Alu	(10)	302	5	2571324
898	27.6	4.5	9.0	chr3	49613163	49613298	(148682261)	+	L1M7	LINE/L1	1282	1420	(4798)	2571721
54	2.0	0.0	0.0	chr3	49613299	49613349	(148682210)	+	(AG)n	Simple_repeat	1	51	(0)	2571723
898	27.6	4.5	9.0	chr3	49613350	49613481	(148682078)	+	L1M7	LINE/L1	1421	1548	(4670)	2571721
1744	17.3	0.4	0.0	chr3	49789824	49790095	(148505464)	+	AluJo	SINE/Alu	2	274	(38)	2571983
71	4.2	0.0	0.0	chr3	49790112	49790185	(148505374)	+	(TC)n	Simple_repeat	1	74	(0)	2571984
12	12.0	0.0	6.5	chr3	50236139	50236169	(148059390)	+	(CGCCC)n	Simple_repeat	1	31	(0)	2572805
24	14.4	0.0	6.6	chr3	50236264	50236324	(148059235)	+	G-rich	Low_complexity	1	61	(0)	2572806
194	38.4	5.9	5.2	chr3	50637662	50637967	(147657592)	C	L2c	LINE/L2	(153)	3234	2925	2573324
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
92	14.5	0.0	0.0	chr3	52027907	52028057	(146267502)	+	(TCTC)n	Simple_repeat	1	151	(0)	2575341
2479	7.7	0.0	1.3	chr3	52028058	52028370	(146267189)	C	AluY	SINE/Alu	(0)	311	3	2575342
2268	8.6	1.6	3.8	chr3	52042467	52042779	(146252780)	+	AluY	SINE/Alu	4	309	(2)	2575365
115	17.8	0.7	5.1	chr3	52042780	52042903	(146252656)	+	GA-rich	Low_complexity	108	219	(0)	2575366
2341	11.4	1.0	0.0	chr3	52042904	52043211	(146252348)	+	AluSq2	SINE/Alu	2	312	(1)	2575367
58	18.3	0.9	0.0	chr3	52049696	52049809	(146245750)	+	GA-rich	Low_complexity	1	115	(0)	2575380
1858	15.7	2.7	0.3	chr3	52220018	52220303	(146075256)	+	AluJr	SINE/Alu	1	293	(19)	2575600
34	0.0	0.0	0.0	chr3	52220304	52220332	(146075227)	+	(AG)n	Simple_repeat	1	29	(0)	2575601
58	7.6	1.2	0.0	chr3	52220335	52220418	(146075141)	+	(GGAG)n	Simple_repeat	1	85	(0)	2575602
2447	7.5	0.7	0.0	chr3	53065294	53065586	(145229973)	C	AluY	SINE/Alu	(16)	295	1	2576937
28	2.4	7.1	0.0	chr3	53065595	53065636	(145229923)	+	(TTTCC)n	Simple_repeat	1	45	(0)	2576938
40	8.4	0.0	0.7	chr3	53065637	53065700	(145229859)	+	(CT)n	Simple_repeat	1	63	(0)	2576939
2086	11.2	0.0	0.7	chr3	53065710	53065986	(145229573)	C	AluSz	SINE/Alu	(37)	275	1	2576940
2447	11.1	0.0	0.3	chr3	53399815	53400112	(144895447)	C	AluSc	SINE/Alu	(12)	297	1	2577573
38	8.2	0.0	0.0	chr3	53400228	53400280	(144895279)	+	(TCTC)n	Simple_repeat	1	53	(0)	2577574
2081	13.2	1.1	1.1	chr3	53400288	53400574	(144894985)	C	AluJr	SINE/Alu	(20)	292	6	2577575
56	0.0	0.0	0.0	chr3	54149884	54149931	(144145628)	+	(TC)n	Simple_repeat	1	48	(0)	2578640
217	21.4	15.5	5.8	chr3	54354031	54354134	(143941425)	C	L3	LINE/CR1	(314)	3785	3670	2578966
32	4.7	2.2	2.1	chr3	54681119	54681164	(143614395)	+	(GA)n	Simple_repeat	1	47	(0)	2579389
16	13.3	3.0	0.0	chr3	55488133	55488165	(142807394)	+	G-rich	Low_complexity	1	34	(0)	2580519
49	2.2	0.0	0.0	chr3	55549931	55549976	(142745583)	+	(AG)n	Simple_repeat	1	46	(0)	2580626
506	29.2	10.7	9.8	chr3	55550052	55550469	(142745090)	+	L2c	LINE/L2	2954	3387	(0)	2580627
40	5.2	3.1	3.0	chr3	55733402	55733465	(142562094)	+	(TC)n	Simple_repeat	1	66	(0)	2580916
19	0.0	0.0	0.0	chr3	55733466	55733486	(142562073)	+	(AC)n	Simple_repeat	1	21	(0)	2580917
46	13.9	1.2	0.0	chr3	55733488	55733542	(142562017)	+	(TC)n	Simple_repeat	1	55	(0)	2580918
4345	12.3	0.8	0.0	chr3	55845998	55846641	(142448918)	C	L1PREC2	LINE/L1	(1)	6159	5511	2581105
54	2.0	0.0	0.0	chr3	55846670	55846720	(142448839)	+	(TC)n	Simple_repeat	1	51	(0)	2581106
79	19.4	0.6	0.0	chr3	56111272	56111430	(142184129)	+	(TCTC)n	Simple_repeat	1	160	(0)	2581522
408	23.6	0.0	4.5	chr3	56684246	56684356	(141611203)	C	MIR	SINE/MIR	(4)	258	153	2582527
61	0.0	0.0	0.0	chr3	56995621	56995672	(141299887)	+	(GA)n	Simple_repeat	1	52	(0)	2583127
292	26.3	0.0	12.6	chr3	56995837	56996010	(141299549)	+	MamTip2	DNA/hAT-Tip100	154	305	(0)	2583128
586	19.9	5.6	0.7	chr3	57015069	57015205	(141280354)	+	MER58A	DNA/hAT-Charlie	1	144	(80)	2583175
305	20.8	19.1	0.0	chr3	57015343	57015448	(141280111)	+	Arthur1B	DNA/hAT-Tip100	19	149	(1076)	2583176
30	5.5	0.0	0.0	chr3	57016995	57017032	(141278527)	+	(CT)n	Simple_repeat	1	38	(0)	2583180
38	0.0	0.0	0.0	chr3	57017033	57017065	(141278494)	+	(CA)n	Simple_repeat	1	33	(0)	2583181
228	20.7	18.3	0.0	chr3	57582858	57582915	(140712644)	+	MIR3	SINE/MIR	89	159	(49)	2584225
1030	16.8	3.7	4.6	chr3	57582917	57583134	(140712425)	+	MER20	DNA/hAT-Charlie	1	216	(3)	2584226
16	26.4	1.4	4.2	chr3	58333103	58333172	(139962387)	+	G-rich	Low_complexity	1	71	(0)	2585827
456	29.9	12.3	2.3	chr3	58532072	58532290	(139763269)	C	MIRb	SINE/MIR	(0)	268	25	2586190
50	20.0	0.8	3.8	chr3	58532322	58532374	(139763185)	+	(TC)n	Simple_repeat	1	51	(0)	2586191
2172	13.3	0.7	0.0	chr3	58532375	58532683	(139762876)	C	AluSx1	SINE/Alu	(0)	312	2	2586192
64	1.7	0.0	0.0	chr3	58570584	58570642	(139724917)	+	(AG)n	Simple_repeat	1	59	(0)	2586269
182	14.8	0.0	0.0	chr3	58570767	58570793	(139724766)	C	L2b	LINE/L2	(25)	3350	3324	2586270
69	1.6	0.0	0.0	chr3	60124010	60124072	(138171487)	+	(AG)n	Simple_repeat	1	63	(0)	2588555
918	19.6	0.0	1.3	chr3	60124074	60124226	(138171333)	C	AluJo	SINE/Alu	(33)	279	129	2588556
267	30.4	1.8	1.8	chr3	61523824	61523937	(136771622)	C	L1ME3G	LINE/L1	(335)	589	476	2590739
25	6.3	0.0	0.0	chr3	61523939	61523971	(136771588)	+	(TC)n	Simple_repeat	1	33	(0)	2590740
41	0.0	0.0	0.0	chr3	61523974	61524008	(136771551)	+	(CA)n	Simple_repeat	1	35	(0)	2590741
109	16.9	5.3	0.4	chr3	61524019	61524265	(136771294)	+	(TA)n	Simple_repeat	1	260	(0)	2590742
14	29.8	2.4	4.6	chr3	61561456	61561540	(136734019)	+	(CGCC)n	Simple_repeat	1	87	(0)	2590827
883	25.6	10.4	2.5	chr3	61642795	61643155	(136652404)	+	L1MC5	LINE/L1	8499	8891	(413)	2590979
558	22.1	0.0	0.0	chr3	61643163	61643257	(136652302)	+	FLAM_A	SINE/Alu	20	114	(28)	2590980
472	27.1	8.3	1.9	chr3	61643276	61643489	(136652070)	+	L1MC5	LINE/L1	8839	9067	(237)	2590981
10533	2.5	0.1	15.3	chr3	61671139	61672773	(136622786)	C	SVA_D	Retroposon/SVA	(0)	1386	1	2591036
39	10.9	0.0	0.0	chr3	61672777	61672837	(136622722)	+	(GAGAGG)n	Simple_repeat	1	61	(0)	2591037
1696	15.5	1.6	3.5	chr3	61672877	61673193	(136622366)	+	AluJb	SINE/Alu	1	311	(1)	2591038
408	28.6	0.8	0.0	chr3	61821797	61821915	(136473644)	C	MIR	SINE/MIR	(48)	214	95	2591292
186	30.6	2.7	2.7	chr3	61822016	61822089	(136473470)	C	MIR	SINE/MIR	(129)	133	60	2591293
629	22.8	13.0	2.2	chr3	61894916	61895099	(136400460)	C	MER20	DNA/hAT-Charlie	(11)	208	2	2591419
282	6.0	2.4	0.0	chr3	62069592	62069637	(136225922)	C	MLT2C2	LTR/ERVL	(0)	561	515	2591706
56	0.0	0.0	0.0	chr3	62069638	62069685	(136225874)	+	(TC)n	Simple_repeat	1	48	(0)	2591707
23	13.6	0.0	0.0	chr3	62069686	62069726	(136225833)	+	(ACACAC)n	Simple_repeat	1	41	(0)	2591708
38	0.0	0.0	0.0	chr3	62583156	62583188	(135712371)	+	(TC)n	Simple_repeat	1	33	(0)	2592498
559	24.9	12.8	3.3	chr3	63190511	63190693	(135104866)	C	MLT1F1	LTR/ERVL-MaLR	(190)	379	177	2593614
23	11.8	0.0	0.0	chr3	63190694	63190731	(135104828)	+	(AGGG)n	Simple_repeat	1	38	(0)	2593615
341	28.1	1.6	3.9	chr3	63190736	63190926	(135104633)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	6	2593614
28	12.4	6.2	0.0	chr3	63895687	63895735	(134399824)	+	(TTCT)n	Simple_repeat	1	51	(0)	2594865
44	10.6	2.5	0.0	chr3	63895736	63895816	(134399743)	+	(TC)n	Simple_repeat	1	83	(0)	2594866
28	12.4	6.2	0.0	chr3	63895817	63895830	(134399729)	+	(TTCT)n	Simple_repeat	4	19	(0)	2594867
12	20.8	0.0	2.9	chr3	63895888	63895922	(134399637)	+	(TTCT)n	Simple_repeat	1	35	(0)	2594867
308	22.6	4.5	3.5	chr3	64239658	64239744	(134055815)	C	MIRb	SINE/MIR	(70)	198	111	2595366
804	12.2	0.0	0.0	chr3	64736101	64736198	(133559361)	+	AluJb	SINE/Alu	8	105	(207)	2596249
76	0.0	0.0	0.0	chr3	64736204	64736268	(133559291)	+	(TC)n	Simple_repeat	1	65	(0)	2596250
1975	14.8	0.0	0.3	chr3	65578638	65578920	(132716639)	+	AluSz	SINE/Alu	1	282	(30)	2597644
43	2.5	0.0	0.0	chr3	65578924	65578964	(132716595)	+	(AG)n	Simple_repeat	1	41	(0)	2597645
870	22.8	0.0	2.6	chr3	65632926	65633119	(132662440)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2597732
1857	16.6	1.3	2.2	chr3	65734173	65734486	(132561073)	+	AluJo	SINE/Alu	1	311	(1)	2597904
68	14.4	0.0	0.0	chr3	65734487	65734598	(132560961)	+	(GAGA)n	Simple_repeat	1	112	(0)	2597905
39	2.7	0.0	0.0	chr3	65812432	65812469	(132483090)	+	(TC)n	Simple_repeat	1	38	(0)	2598064
20	0.0	0.0	0.0	chr3	65812470	65812491	(132483068)	+	(AC)n	Simple_repeat	1	22	(0)	2598065
38	0.0	5.0	0.0	chr3	65919670	65919709	(132375850)	+	(TC)n	Simple_repeat	1	42	(0)	2598277
907	28.6	6.8	7.6	chr3	65926129	65926327	(132369232)	C	MER113	DNA/hAT-Charlie	(78)	443	233	2598293
50	2.2	0.0	0.0	chr3	65926328	65926374	(132369185)	+	(TC)n	Simple_repeat	1	47	(0)	2598294
907	28.6	6.8	7.6	chr3	65926375	65926395	(132369164)	C	MER113	DNA/hAT-Charlie	(289)	232	232	2598293
4334	10.8	6.8	1.0	chr3	65926396	65926712	(132368847)	+	MER41B	LTR/ERV1	1	359	(275)	2598295
26	8.8	0.0	0.0	chr3	66633806	66633841	(131661718)	+	(TG)n	Simple_repeat	1	36	(0)	2599591
49	13.0	0.0	0.0	chr3	66633833	66633908	(131661651)	+	(GA)n	Simple_repeat	1	76	(0)	2599592
613	27.6	2.0	2.0	chr3	66695398	66695609	(131599950)	+	LTR33	LTR/ERVL	1	200	(315)	2599709
41	2.5	0.0	0.0	chr3	66695638	66695677	(131599882)	+	(TC)n	Simple_repeat	1	40	(0)	2599710
67	4.4	0.0	0.0	chr3	67023477	67023547	(131272012)	+	(AG)n	Simple_repeat	1	71	(0)	2600243
48	9.9	4.4	2.1	chr3	67069725	67069814	(131225745)	+	GA-rich	Low_complexity	1	94	(0)	2600302
59	0.0	1.9	0.0	chr3	67792405	67792458	(130503101)	+	(AG)n	Simple_repeat	1	55	(0)	2601411
2014	15.9	0.0	1.0	chr3	67792486	67792786	(130502773)	C	AluJb	SINE/Alu	(14)	298	1	2601412
1014	28.9	13.9	4.0	chr3	69496316	69496601	(128798958)	+	MLT1K	LTR/ERVL-MaLR	98	425	(170)	2604260
80	2.6	0.0	0.0	chr3	69496602	69496678	(128798881)	+	(AG)n	Simple_repeat	1	77	(0)	2604261
1014	28.9	13.9	4.0	chr3	69496679	69496838	(128798721)	+	MLT1K	LTR/ERVL-MaLR	426	595	(0)	2604260
49	2.2	0.0	0.0	chr3	71634654	71634699	(126660860)	+	(TC)n	Simple_repeat	1	46	(0)	2607553
15	14.7	0.0	0.0	chr3	71634700	71634729	(126660830)	+	(ATAG)n	Simple_repeat	1	30	(0)	2607554
1193	23.0	7.1	3.0	chr3	72073959	72074146	(126221413)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	172	2608406
44	0.0	0.0	0.0	chr3	72074147	72074184	(126221375)	+	(AG)n	Simple_repeat	1	38	(0)	2608407
1193	23.0	7.1	3.0	chr3	72074185	72074291	(126221268)	C	MLT1A	LTR/ERVL-MaLR	(203)	171	67	2608406
262	11.9	0.0	5.8	chr3	72074324	72074837	(126220722)	+	(TA)n	Simple_repeat	1	514	(0)	2608408
1377	23.8	3.2	6.9	chr3	72082831	72083219	(126212340)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2608424
1173	20.2	8.2	12.9	chr3	72154668	72154846	(126140713)	+	MLT1B	LTR/ERVL-MaLR	2	181	(209)	2608586
37	11.4	0.0	0.0	chr3	72154847	72154905	(126140654)	+	(CT)n	Simple_repeat	1	59	(0)	2608587
1173	20.2	8.2	12.9	chr3	72154906	72155135	(126140424)	+	MLT1B	LTR/ERVL-MaLR	182	390	(0)	2608586
775	23.6	9.0	3.6	chr3	72253826	72254030	(126041529)	+	MLT1H	LTR/ERVL-MaLR	1	223	(326)	2608796
34	0.0	0.0	0.0	chr3	72254031	72254059	(126041500)	+	(CT)n	Simple_repeat	1	29	(0)	2608797
775	23.6	9.0	3.6	chr3	72254060	72254073	(126041486)	+	MLT1H	LTR/ERVL-MaLR	224	233	(316)	2608796
870	25.7	1.7	10.7	chr3	72254107	72254359	(126041200)	+	MLT1H	LTR/ERVL-MaLR	216	445	(104)	2608796
691	26.6	10.6	2.1	chr3	72306774	72307007	(125988552)	+	MIR	SINE/MIR	2	257	(5)	2608916
53	0.0	0.0	0.0	chr3	72539506	72539550	(125756009)	+	(TC)n	Simple_repeat	1	45	(0)	2609378
1407	22.9	6.6	10.9	chr3	72602630	72603040	(125692519)	+	MLT1F2	LTR/ERVL-MaLR	101	492	(68)	2609543
50	0.0	0.0	0.0	chr3	72603041	72603083	(125692476)	+	(GA)n	Simple_repeat	1	43	(0)	2609544
32	0.0	0.0	0.0	chr3	72603084	72603118	(125692441)	+	(TG)n	Simple_repeat	1	35	(0)	2609545
747	13.4	10.4	0.0	chr3	72603132	72603243	(125692316)	C	AluJr	SINE/Alu	(187)	125	1	2609546
944	28.3	5.8	8.0	chr3	72605028	72605415	(125690144)	+	MER115	DNA/hAT-Tip100	1	379	(314)	2609549
42	10.0	0.0	0.0	chr3	72605416	72605479	(125690080)	+	(AGAG)n	Simple_repeat	1	64	(0)	2609550
873	30.1	2.7	1.4	chr3	72605480	72605769	(125689790)	+	MER115	DNA/hAT-Tip100	374	667	(26)	2609551
1921	13.8	0.3	1.4	chr3	72851774	72852055	(125443504)	+	AluSz	SINE/Alu	1	279	(33)	2610051
60	0.0	0.0	0.0	chr3	72852057	72852107	(125443452)	+	(TC)n	Simple_repeat	1	51	(0)	2610052
42	3.7	3.6	0.0	chr3	72852108	72852163	(125443396)	+	(AT)n	Simple_repeat	1	58	(0)	2610053
411	21.4	22.6	9.4	chr3	73204759	73205083	(125090476)	C	MLT1G1	LTR/ERVL-MaLR	(1)	594	185	2610812
34	11.5	8.0	0.0	chr3	73205086	73205160	(125090399)	+	GA-rich	Low_complexity	1	81	(0)	2610813
838	24.4	3.6	5.0	chr3	73205166	73205416	(125090143)	C	MLT1G1	LTR/ERVL-MaLR	(353)	226	1	2610812
181	18.9	2.8	1.0	chr3	73227850	73228242	(125067317)	+	(CT)n	Simple_repeat	1	404	(0)	2610861
268	34.4	10.9	0.9	chr3	73297935	73298148	(124997411)	C	MIRb	SINE/MIR	(30)	238	1	2610984
21	22.4	1.9	1.8	chr3	73298192	73298245	(124997314)	+	(CT)n	Simple_repeat	1	55	(0)	2610985
16	0.0	4.2	4.0	chr3	73794755	73794778	(124500781)	+	(GA)n	Simple_repeat	1	25	(0)	2611770
43	17.2	1.1	1.1	chr3	73794826	73794851	(124500708)	+	GA-rich	Low_complexity	1	25	(0)	2611771
48	0.0	0.0	0.0	chr3	73794852	73794892	(124500667)	+	(GT)n	Simple_repeat	1	41	(0)	2611772
43	17.2	1.1	1.1	chr3	73794893	73794953	(124500606)	+	GA-rich	Low_complexity	26	87	(0)	2611773
395	34.4	1.3	4.3	chr3	73795059	73795292	(124500267)	+	LTR105_Mam	LTR/ERVL	19	245	(355)	2611774
105	24.9	0.8	0.4	chr3	75671785	75672047	(122623512)	+	GA-rich	Low_complexity	1	265	(0)	2614564
1667	23.2	7.8	3.1	chr3	76724687	76725162	(121570397)	+	MLT1D	LTR/ERVL-MaLR	2	501	(4)	2615944
67	2.8	1.4	1.3	chr3	76854019	76854092	(121441467)	+	(TC)n	Simple_repeat	1	75	(0)	2616106
34	0.0	0.0	0.0	chr3	77180389	77180417	(121115142)	+	(TC)n	Simple_repeat	1	29	(0)	2616541
17	0.0	0.0	0.0	chr3	77188950	77188968	(121106591)	+	(TG)n	Simple_repeat	1	19	(0)	2616551
37	2.9	0.0	0.0	chr3	77188969	77189004	(121106555)	+	(GA)n	Simple_repeat	1	36	(0)	2616552
311	28.6	0.0	9.3	chr3	77256920	77257058	(121038501)	+	MER127	DNA/TcMar-Tigger	10	135	(229)	2616640
38	5.0	0.0	0.0	chr3	78656897	78656938	(119638621)	+	(TC)n	Simple_repeat	1	42	(0)	2618439
1610	18.3	15.7	0.8	chr3	80299157	80299340	(117996219)	C	MSTA	LTR/ERVL-MaLR	(0)	428	220	2620584
50	0.0	0.0	0.0	chr3	80299341	80299383	(117996176)	+	(GA)n	Simple_repeat	1	43	(0)	2620585
1610	18.3	15.7	0.8	chr3	80299384	80299562	(117995997)	C	MSTA	LTR/ERVL-MaLR	(209)	219	2	2620584
720	28.0	4.8	0.0	chr3	81296170	81296387	(116999172)	+	LTR33C	LTR/ERVL	362	590	(39)	2621880
59	6.9	1.3	0.0	chr3	81296434	81296509	(116999050)	+	(CT)n	Simple_repeat	1	77	(0)	2621881
40304	12.0	3.5	3.0	chr3	87734040	87740893	(110554666)	C	Harlequin-int	LTR/ERV1	(1)	6895	1	2629906
7593	20.2	5.2	6.2	chr3	89985042	89988070	(108307489)	+	L1MA3	LINE/L1	2928	5934	(1625)	2632643
259	36.4	10.5	4.1	chr3	94136022	94136508	(104159051)	+	L2	LINE/L2	2478	2999	(420)	2633891
560	19.4	3.1	4.7	chr3	94139107	94139235	(104156324)	+	FLAM_A	SINE/Alu	1	127	(15)	2633900
53	0.0	0.0	0.0	chr3	94139236	94139280	(104156279)	+	(AG)n	Simple_repeat	1	45	(0)	2633901
17	12.7	0.0	0.0	chr3	94139289	94139314	(104156245)	+	(T)n	Simple_repeat	1	26	(0)	2633902
457	33.3	8.4	1.2	chr3	94139318	94139572	(104155987)	+	L4_C_Mam	LINE/RTE-X	4245	4519	(619)	2633903
12926	16.4	1.4	3.7	chr3	95315107	95317462	(102978097)	C	Tigger1	DNA/TcMar-Tigger	(113)	2305	5	2635326
196	14.3	6.5	0.0	chr3	96673357	96673771	(101621788)	+	(TC)n	Simple_repeat	1	442	(0)	2636918
6323	7.7	0.5	1.7	chr3	96673781	96674674	(101620885)	C	HERV17-int	LTR/ERV1	(7779)	847	1	2636917
34	18.6	1.4	0.0	chr3	97748512	97748584	(100546975)	+	(TCTC)n	Simple_repeat	1	74	(0)	2638199
2370	17.8	3.7	0.2	chr3	98552410	98552854	(99742705)	C	LOR1b	LTR/ERV1	(0)	461	1	2639077
24	3.5	0.0	0.0	chr3	98552911	98552939	(99742620)	+	(TC)n	Simple_repeat	1	29	(0)	2639078
5276	5.5	3.3	0.8	chr3	98708617	98709320	(99586239)	C	LTR30	LTR/ERV1	(0)	722	1	2639331
1705	15.6	2.6	2.9	chr3	98724135	98724441	(99571118)	+	AluJr	SINE/Alu	2	307	(5)	2639368
17	15.9	0.0	0.0	chr3	98724455	98724489	(99571070)	+	GA-rich	Low_complexity	1	35	(0)	2639369
394	22.9	0.9	10.3	chr3	98724500	98724616	(99570943)	+	L2a	LINE/L2	3321	3426	(0)	2639370
3441	16.6	4.2	1.3	chr3	98870082	98870477	(99425082)	C	L1PB3	LINE/L1	(1135)	5011	4613	2639560
657	19.8	13.6	0.0	chr3	98870484	98870604	(99424955)	+	AluSc8	SINE/Alu	133	272	(39)	2639562
109	14.0	2.4	1.4	chr3	98870607	98870813	(99424746)	+	A-rich	Low_complexity	1	212	(0)	2639563
234	30.3	1.3	1.3	chr3	99084911	99084987	(99210572)	C	Charlie24	DNA/hAT-Charlie	(0)	2450	2374	2639834
14	17.4	2.9	0.0	chr3	99085118	99085151	(99210408)	+	(CTCTTT)n	Simple_repeat	1	35	(0)	2639835
895	24.2	5.4	6.8	chr3	99085167	99085774	(99209785)	+	LTR41C	LTR/ERVL	1	694	(7)	2639836
192	32.1	17.3	4.2	chr3	99911620	99911879	(98383680)	+	L2c	LINE/L2	3087	3387	(0)	2640884
2132	22.1	10.4	3.0	chr3	100115419	100115539	(98180020)	C	L1MC4	LINE/L1	(11)	8031	7926	2641188
91	5.1	0.0	0.0	chr3	100115540	100115641	(98179918)	+	(TCTCTC)n	Simple_repeat	1	102	(0)	2641189
2132	21.9	11.8	3.5	chr3	100115642	100116262	(98179297)	C	L1MC4	LINE/L1	(117)	7925	7240	2641188
2930	16.0	0.7	17.8	chr3	100456471	100456903	(97838656)	C	MLT2B3	LTR/ERVL	(0)	554	226	2641754
54	3.7	0.0	0.0	chr3	100456904	100456958	(97838601)	+	(GA)n	Simple_repeat	1	55	(0)	2641755
2930	16.0	0.7	17.8	chr3	100456959	100457193	(97838366)	C	MLT2B3	LTR/ERVL	(329)	225	1	2641754
5717	18.9	7.0	2.3	chr3	101311206	101313127	(96982432)	+	L1MB8	LINE/L1	4128	6177	(1)	2642852
48	0.0	0.0	0.0	chr3	105368224	105368264	(92927295)	+	(AG)n	Simple_repeat	1	41	(0)	2648182
18	8.5	0.0	0.0	chr3	105474604	105474628	(92820931)	+	(AG)n	Simple_repeat	1	25	(0)	2648315
73	1.5	0.0	0.0	chr3	105754494	105754560	(92540999)	+	(AG)n	Simple_repeat	1	67	(0)	2648659
47	0.0	0.0	0.0	chr3	106131621	106131660	(92163899)	+	(CT)n	Simple_repeat	1	40	(0)	2649125
341	31.0	8.4	1.1	chr3	107363453	107363628	(90931931)	C	MIR3	SINE/MIR	(17)	191	2	2650717
78	5.3	0.0	0.0	chr3	107363772	107363869	(90931690)	+	(GA)n	Simple_repeat	1	98	(0)	2650718
14	13.9	2.2	6.5	chr3	107524117	107524161	(90771398)	+	(AGGTGG)n	Simple_repeat	1	46	(0)	2651002
59	0.0	0.0	0.0	chr3	108049095	108049144	(90246415)	+	(TC)n	Simple_repeat	1	50	(0)	2651751
5838	20.1	7.3	4.8	chr3	108622251	108622836	(89672723)	C	L1M1	LINE/L1	(5207)	2358	1768	2652569
53	0.0	0.0	0.0	chr3	108622837	108622881	(89672678)	+	(TC)n	Simple_repeat	1	45	(0)	2652570
225	27.5	12.2	4.7	chr3	108630752	108631007	(89664552)	C	HAL1	LINE/L1	(0)	2507	2230	2652581
56	0.0	0.0	0.0	chr3	108631009	108631056	(89664503)	+	(AC)n	Simple_repeat	1	48	(0)	2652582
35	0.0	0.0	0.0	chr3	108631057	108631094	(89664465)	+	(TC)n	Simple_repeat	1	38	(0)	2652583
890	24.4	2.8	4.3	chr3	108631124	108631380	(89664179)	C	HAL1	LINE/L1	(669)	1838	1586	2652581
24	12.5	5.8	0.0	chr3	112561652	112561703	(85733856)	+	(GACGG)n	Simple_repeat	1	55	(0)	2658010
238	29.6	1.4	0.0	chr3	113071925	113071995	(85223564)	+	MER63D	DNA/hAT-Blackjack	1	72	(989)	2658672
56	15.4	1.0	0.0	chr3	113072101	113072202	(85223357)	+	(CTCT)n	Simple_repeat	1	103	(0)	2658673
18	4.8	0.0	0.0	chr3	113072202	113072223	(85223336)	+	(CA)n	Simple_repeat	1	22	(0)	2658674
41	2.6	0.0	0.0	chr3	113118183	113118222	(85177337)	+	(TC)n	Simple_repeat	1	40	(0)	2658752
6240	9.6	3.7	3.7	chr3	113349932	113351305	(84944254)	+	HERV9N-int	LTR/ERV1	736	1864	(3238)	2659068
871	24.5	5.4	0.8	chr3	113643952	113644198	(84651361)	C	L1MEg	LINE/L1	(2921)	4533	4275	2659498
49	4.0	0.0	0.0	chr3	113644199	113644249	(84651310)	+	(TC)n	Simple_repeat	1	51	(0)	2659505
1344	14.1	4.3	15.0	chr3	113678738	113679009	(84616550)	C	AluJr4	SINE/Alu	(9)	303	83	2659555
37	0.0	0.0	0.0	chr3	113679010	113679041	(84616518)	+	(TC)n	Simple_repeat	1	32	(0)	2659556
1344	14.1	4.3	15.0	chr3	113679042	113679108	(84616451)	C	AluJr4	SINE/Alu	(231)	81	2	2659555
58	1.5	2.9	2.8	chr3	114384101	114384170	(83911389)	+	(TC)n	Simple_repeat	1	72	(0)	2660681
66	18.3	2.9	0.7	chr3	114454074	114454211	(83841348)	+	GA-rich	Low_complexity	1	142	(0)	2660762
17	20.3	7.8	0.0	chr3	114454763	114454813	(83840746)	+	(TC)n	Simple_repeat	1	55	(0)	2660763
107	22.7	2.0	0.4	chr3	114454929	114455183	(83840376)	+	GA-rich	Low_complexity	1	260	(0)	2660764
470	30.3	6.4	5.7	chr3	114696821	114697068	(83598491)	C	Penelope1_Vert	LINE/Penelope	(13)	1074	825	2661062
519	24.6	0.0	6.3	chr3	115055171	115055187	(83240372)	+	MLT1F1	LTR/ERVL-MaLR	176	189	(359)	2661581
44	0.0	0.0	0.0	chr3	115055188	115055225	(83240334)	+	(TC)n	Simple_repeat	1	38	(0)	2661582
1099	22.9	7.3	0.7	chr3	115055226	115055544	(83240015)	+	MLT1F1	LTR/ERVL-MaLR	190	568	(1)	2661581
67	19.0	2.7	0.7	chr3	115100328	115100474	(83195085)	+	GA-rich	Low_complexity	1	151	(0)	2661646
26	23.7	4.1	6.5	chr3	115623333	115623479	(82672080)	+	GA-rich	Low_complexity	1	153	(0)	2662366
582	20.0	1.8	0.0	chr3	117637713	117637822	(80657737)	+	MER44A	DNA/TcMar-Tigger	2	113	(226)	2665177
50	6.4	0.0	0.0	chr3	117637823	117637887	(80657672)	+	(GA)n	Simple_repeat	1	65	(0)	2665178
1207	15.7	4.1	0.0	chr3	117637896	117638105	(80657454)	+	Tigger7	DNA/TcMar-Tigger	2265	2483	(8)	2665179
1025	20.3	6.2	3.1	chr3	117710322	117710666	(80584893)	C	MSTD	LTR/ERVL-MaLR	(10)	386	1	2665262
34	6.7	2.1	0.0	chr3	117710770	117710816	(80584743)	+	(AG)n	Simple_repeat	1	48	(0)	2665263
2276	10.0	0.3	0.7	chr3	119332202	119332500	(78963059)	C	AluSq2	SINE/Alu	(15)	298	1	2667395
242	34.3	7.7	3.6	chr3	119332501	119332575	(78962984)	C	CR1-3_Croc	LINE/CR1	(984)	2621	2548	2667394
50	4.0	0.0	0.0	chr3	119332585	119332636	(78962923)	+	(TC)n	Simple_repeat	1	52	(0)	2667396
38	8.3	0.0	0.0	chr3	119332637	119332688	(78962871)	+	(AC)n	Simple_repeat	1	52	(0)	2667397
61	11.6	1.0	0.0	chr3	119967770	119967866	(78327693)	+	(TCTC)n	Simple_repeat	1	98	(0)	2668434
2210	9.8	1.7	0.0	chr3	119967868	119968153	(78327406)	C	AluSc8	SINE/Alu	(20)	291	1	2668435
53	0.0	0.0	0.0	chr3	120125711	120125755	(78169804)	+	(AG)n	Simple_repeat	1	45	(0)	2668683
231	36.1	1.8	1.8	chr3	120125761	120125870	(78169689)	C	MER5B	DNA/hAT-Charlie	(9)	169	60	2668684
33551	10.2	2.5	2.3	chr3	120621723	120623296	(77672263)	C	HERVIP10FH-int	LTR/ERV1	(3912)	1190	1	2669416
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
1730	17.2	3.3	0.3	chr3	121635191	121635209	(76660350)	C	AluSz	SINE/Alu	(4)	308	290	2670788
75	2.4	4.6	0.0	chr3	121635210	121635296	(76660263)	+	(TC)n	Simple_repeat	1	91	(0)	2670789
2206	14.0	9.3	1.8	chr3	122572926	122573324	(75722235)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2672239
66	0.0	0.0	0.0	chr3	123030623	123030678	(75264881)	+	(TC)n	Simple_repeat	1	56	(0)	2673005
15	0.0	0.0	0.0	chr3	123030686	123030702	(75264857)	+	(TG)n	Simple_repeat	1	17	(0)	2673006
16	7.0	3.1	3.0	chr3	123144219	123144250	(75151309)	+	(CTTT)n	Simple_repeat	1	33	(0)	2673222
58	4.9	0.0	0.0	chr3	123187169	123187231	(75108328)	+	(CT)n	Simple_repeat	1	63	(0)	2673303
41	0.0	0.0	0.0	chr3	123346608	123346642	(74948917)	+	(TC)n	Simple_repeat	1	35	(0)	2673554
181	30.1	2.6	4.4	chr3	123395915	123396717	(74898842)	+	GA-rich	Low_complexity	1	787	(0)	2673631
1514	13.5	10.8	23.5	chr3	123672010	123672464	(74623095)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2674118
30	3.1	0.0	0.0	chr3	123884352	123884384	(74411175)	+	(GGGCG)n	Simple_repeat	1	33	(0)	2674440
16	22.7	5.0	3.2	chr3	123884399	123884458	(74411101)	+	GA-rich	Low_complexity	1	63	(0)	2674441
20	10.1	0.0	0.0	chr3	124033192	124033223	(74262336)	+	(GGC)n	Simple_repeat	1	32	(0)	2674684
47	22.1	1.7	0.0	chr3	124033219	124033333	(74262226)	+	GA-rich	Low_complexity	1	117	(0)	2674685
53	2.0	0.0	0.0	chr3	127565054	127565103	(70730456)	+	(TC)n	Simple_repeat	1	50	(0)	2680272
15	21.5	6.0	1.9	chr3	127748343	127748392	(70547167)	+	GA-rich	Low_complexity	1	53	(0)	2680595
55	3.7	0.0	0.0	chr3	127748394	127748449	(70547110)	+	(GA)n	Simple_repeat	1	56	(0)	2680596
1592	16.7	13.8	0.9	chr3	127748464	127748802	(70546757)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2680597
30	11.2	2.1	0.0	chr3	127912211	127912258	(70383301)	+	(AG)n	Simple_repeat	1	49	(0)	2680901
53	0.0	0.0	0.0	chr3	129388458	129388502	(68907057)	+	(GA)n	Simple_repeat	1	45	(0)	2683647
21	0.0	0.0	0.0	chr3	129388503	129388525	(68907034)	+	(TG)n	Simple_repeat	1	23	(0)	2683648
394	33.7	12.2	0.5	chr3	129388545	129388747	(68906812)	+	MIRb	SINE/MIR	1	230	(38)	2683649
295	25.2	15.4	1.0	chr3	129428867	129428966	(68866593)	+	MIRc	SINE/MIR	86	202	(66)	2683737
26	2.8	2.6	2.6	chr3	129607107	129607144	(68688415)	+	(TCTCTGCG)n	Simple_repeat	1	39	(0)	2684063
14	22.4	2.4	0.0	chr3	129607184	129607225	(68688334)	+	(TTCTGC)n	Simple_repeat	1	43	(0)	2684064
1349	19.2	4.8	8.4	chr3	129908150	129908278	(68387281)	+	Zaphod2	DNA/hAT-Tip100	2177	2301	(1223)	2684635
2991	12.5	5.9	7.8	chr3	129908279	129908832	(68386727)	C	LTR35A	LTR/ERV1	(4)	543	1	2684636
28	19.4	0.0	0.0	chr3	129919563	129919618	(68375941)	+	(TCCT)n	Simple_repeat	1	56	(0)	2684669
38	4.3	4.1	0.0	chr3	129919619	129919667	(68375892)	+	(TC)n	Simple_repeat	1	51	(0)	2684670
1870	13.2	9.0	12.3	chr3	129989453	129989900	(68305659)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2684835
30	5.4	6.5	3.0	chr3	131925118	131925179	(66370380)	+	(TC)n	Simple_repeat	1	66	(0)	2687670
245	33.1	4.7	10.1	chr3	131925193	131925508	(66370051)	+	L2c	LINE/L2	3054	3351	(36)	2687671
38	0.0	0.0	0.0	chr3	131942422	131942463	(66353096)	+	(GT)n	Simple_repeat	1	42	(0)	2687702
61	0.0	0.0	0.0	chr3	131942464	131942515	(66353044)	+	(GA)n	Simple_repeat	1	52	(0)	2687703
49388	6.3	0.8	1.0	chr3	132303682	132309950	(65985609)	+	Harlequin-int	LTR/ERV1	635	6895	(1)	2688264
20	10.4	0.0	8.0	chr3	133573614	133573663	(64721896)	+	(CCCTC)n	Simple_repeat	1	50	(0)	2690190
38	18.4	1.2	0.0	chr3	133742413	133742492	(64553067)	+	GA-rich	Low_complexity	1	81	(0)	2690453
21	10.8	2.4	2.3	chr3	133895644	133895685	(64399874)	+	GA-rich	Low_complexity	1	43	(0)	2690631
14	17.2	1.6	9.4	chr3	133895749	133895811	(64399748)	+	G-rich	Low_complexity	1	64	(0)	2690632
13	14.0	0.0	5.7	chr3	133895850	133895884	(64399675)	+	(CGCCTG)n	Simple_repeat	1	35	(0)	2690633
52	29.0	2.4	0.6	chr3	134229200	134229369	(64066190)	+	(CT)n	Simple_repeat	1	174	(0)	2691103
11	29.1	3.7	0.0	chr3	134364168	134364221	(63931338)	+	G-rich	Low_complexity	1	56	(0)	2691340
17	31.2	0.0	0.0	chr3	134795323	134795373	(63500186)	+	(CT)n	Simple_repeat	1	51	(0)	2691963
33	29.1	1.0	0.0	chr3	134795373	134795487	(63500072)	+	(CA)n	Simple_repeat	1	116	(0)	2691964
17	31.1	0.0	0.0	chr3	134795374	134795381	(63500178)	+	(CGCTCT)n	Simple_repeat	5	63	(0)	2691965
55	0.0	0.0	0.0	chr3	135710712	135710758	(62584801)	+	(TC)n	Simple_repeat	1	47	(0)	2693241
2771	24.3	9.4	2.8	chr3	135900899	135901203	(62394356)	C	L1MEd	LINE/L1	(5614)	1557	1245	2693495
46	0.0	0.0	0.0	chr3	135901204	135901242	(62394317)	+	(TC)n	Simple_repeat	1	39	(0)	2693497
2771	22.9	7.7	3.2	chr3	135901243	135901497	(62394062)	C	L1MEd	LINE/L1	(1191)	1342	919	2693495
83	17.0	0.7	0.0	chr3	135985295	135985442	(62310117)	+	(CT)n	Simple_repeat	1	149	(0)	2693626
267	31.9	5.8	7.4	chr3	135985490	135985611	(62309948)	C	L2	LINE/L2	(3291)	128	9	2693627
2304	10.6	0.0	0.7	chr3	136086920	136087221	(62208338)	+	AluSp	SINE/Alu	1	300	(13)	2693765
63	0.0	0.0	0.0	chr3	136087246	136087299	(62208260)	+	(TC)n	Simple_repeat	1	54	(0)	2693766
1601	22.4	4.9	1.3	chr3	136550777	136551169	(61744390)	C	L1MC3	LINE/L1	(305)	7480	7073	2694560
68	6.0	0.0	0.0	chr3	136551181	136551267	(61744292)	+	(GA)n	Simple_repeat	1	87	(0)	2694566
1308	18.6	1.1	10.3	chr3	136551269	136551579	(61743980)	C	AluJb	SINE/Alu	(30)	282	1	2694567
890	17.2	9.6	3.8	chr3	136701983	136702075	(61593484)	C	AluJo	SINE/Alu	(82)	230	139	2694882
72	6.0	0.0	0.0	chr3	136702076	136702162	(61593397)	+	(AGAGAGAC)n	Simple_repeat	1	87	(0)	2694883
890	17.2	9.6	3.8	chr3	136702163	136702254	(61593305)	C	AluJo	SINE/Alu	(174)	138	33	2694882
27	13.0	0.0	0.0	chr3	136802777	136802818	(61492741)	+	(TG)n	Simple_repeat	1	42	(0)	2695123
29	11.6	2.1	0.0	chr3	136802818	136802864	(61492695)	+	(GA)n	Simple_repeat	1	48	(0)	2695124
23	31.0	0.0	0.0	chr3	136802819	136802852	(61492707)	+	(TGAG)n	Simple_repeat	1	76	(0)	2695125
2065	11.7	3.7	7.8	chr3	138153601	138153998	(60141561)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2697053
933	22.6	12.8	1.7	chr3	138328843	138329189	(59966370)	+	Charlie29a	DNA/hAT-Charlie	329	719	(0)	2697341
271	27.1	9.2	0.8	chr3	138609349	138609478	(59686081)	C	L1ME4a	LINE/L1	(16)	6108	5967	2697790
95	3.0	0.0	2.8	chr3	138609534	138609641	(59685918)	+	(CT)n	Simple_repeat	1	108	(0)	2697791
18	6.3	5.9	0.0	chr3	139428040	139428073	(58867486)	+	(GAGAGG)n	Simple_repeat	1	36	(0)	2699286
65	1.6	1.6	0.0	chr3	139428080	139428142	(58867417)	+	(GA)n	Simple_repeat	1	64	(0)	2699287
496	27.0	11.4	1.2	chr3	139428219	139428383	(58867176)	+	MIRb	SINE/MIR	64	247	(21)	2699288
37	27.1	0.9	1.9	chr3	140239843	140239947	(58055612)	+	(TA)n	Simple_repeat	1	106	(0)	2700533
43	2.5	0.0	0.0	chr3	140240135	140240175	(58055384)	+	(TC)n	Simple_repeat	1	41	(0)	2700534
72	27.0	0.6	1.1	chr3	140240176	140240355	(58055204)	+	(AT)n	Simple_repeat	1	181	(0)	2700535
1019	16.9	0.7	0.7	chr3	140834656	140834809	(57460750)	+	AluJr	SINE/Alu	144	297	(15)	2701388
44	11.5	2.6	0.0	chr3	140834810	140834886	(57460673)	+	(GAGAAA)n	Simple_repeat	1	79	(0)	2701389
73	1.4	0.0	2.6	chr3	140834899	140834976	(57460583)	+	(GGAA)n	Simple_repeat	1	78	(0)	2701390
516	26.0	4.5	0.0	chr3	140912213	140912339	(57383220)	C	MLT1K	LTR/ERVL-MaLR	(11)	584	452	2701502
40	4.5	0.0	2.1	chr3	140912356	140912403	(57383156)	+	(TC)n	Simple_repeat	1	48	(0)	2701503
260	21.5	4.4	0.0	chr3	140916531	140916595	(57378964)	+	MLT1F	LTR/ERVL-MaLR	1	68	(492)	2701507
85	18.9	3.9	5.5	chr3	140916611	140916889	(57378670)	+	(CTCTC)n	Simple_repeat	1	290	(0)	2701508
404	22.9	12.7	4.0	chr3	140952965	140953164	(57342395)	C	Charlie29a	DNA/hAT-Charlie	(172)	547	328	2701557
1370	22.1	4.4	8.2	chr3	141658857	141659066	(56636493)	C	MLT1D	LTR/ERVL-MaLR	(69)	436	219	2702646
85	0.0	1.3	0.0	chr3	141659067	141659142	(56636417)	+	(TC)n	Simple_repeat	1	77	(0)	2702647
1370	22.1	4.4	8.2	chr3	141659143	141659385	(56636174)	C	MLT1D	LTR/ERVL-MaLR	(287)	218	2	2702646
1855	20.4	5.3	0.0	chr3	141809923	141810295	(56485264)	+	MLT2D	LTR/ERVL	1	394	(20)	2702907
48	22.9	1.8	0.9	chr3	141810296	141810409	(56485150)	+	(CT)n	Simple_repeat	1	116	(0)	2702908
557	23.8	18.0	0.5	chr3	141834367	141834590	(56460969)	+	MLT1L	LTR/ERVL-MaLR	21	292	(318)	2702955
80	10.0	5.6	0.0	chr3	141834623	141834752	(56460807)	+	(CT)n	Simple_repeat	1	137	(0)	2702956
2142	8.2	3.3	0.7	chr3	141834753	141835044	(56460515)	C	AluSx1	SINE/Alu	(12)	300	1	2702957
214	22.0	0.0	0.0	chr3	142982200	142982249	(55313310)	C	MIRb	SINE/MIR	(47)	221	172	2705014
14	26.9	4.6	1.5	chr3	142982267	142982331	(55313228)	+	GA-rich	Low_complexity	1	68	(0)	2705015
18	0.0	0.0	0.0	chr3	142982331	142982350	(55313209)	+	(AC)n	Simple_repeat	1	20	(0)	2705016
36	2.9	0.0	0.0	chr3	142982351	142982385	(55313174)	+	(AG)n	Simple_repeat	1	35	(0)	2705017
260	31.6	3.0	1.0	chr3	142982387	142982485	(55313074)	C	MIRb	SINE/MIR	(159)	109	9	2705014
231	27.9	9.2	0.0	chr3	142982512	142982590	(55312969)	+	L2b	LINE/L2	3224	3310	(65)	2705018
23	3.3	0.0	2.9	chr3	143976532	143976555	(54319004)	+	(GT)n	Simple_repeat	1	24	(0)	2706427
35	0.0	0.0	0.0	chr3	143976556	143976585	(54318974)	+	(GA)n	Simple_repeat	1	30	(0)	2706428
2255	19.2	11.1	1.0	chr3	145830173	145830344	(52465215)	+	MLT2B3	LTR/ERVL	1	218	(336)	2708785
57	3.4	1.6	0.0	chr3	145830345	145830405	(52465154)	+	(TC)n	Simple_repeat	1	62	(0)	2708786
2255	19.2	11.1	1.0	chr3	145830406	145830682	(52464877)	+	MLT2B3	LTR/ERVL	219	507	(47)	2708785
3010	17.0	2.4	5.6	chr3	148776432	148776680	(49518879)	+	MLT2B3	LTR/ERVL	1	230	(324)	2712551
50	2.2	0.0	0.0	chr3	148776681	148776727	(49518832)	+	(TC)n	Simple_repeat	1	47	(0)	2712552
3010	17.0	2.4	5.6	chr3	148776728	148777050	(49518509)	+	MLT2B3	LTR/ERVL	231	554	(0)	2712551
21	0.0	0.0	0.0	chr3	149386872	149386894	(48908665)	+	(GT)n	Simple_repeat	1	23	(0)	2713496
23	12.4	0.0	0.0	chr3	149386894	149386928	(48908631)	+	(GA)n	Simple_repeat	1	35	(0)	2713497
1819	13.7	4.8	7.4	chr3	149439945	149440283	(48855276)	+	MER2	DNA/TcMar-Tigger	2	331	(14)	2713601
49	2.2	0.0	0.0	chr3	149440284	149440329	(48855230)	+	(CT)n	Simple_repeat	1	46	(0)	2713602
26	8.0	2.4	0.0	chr3	149656745	149656754	(48638805)	+	(AC)n	Simple_repeat	1	11	(0)	2713990
39	2.7	0.0	0.0	chr3	149656755	149656792	(48638767)	+	(TC)n	Simple_repeat	1	38	(0)	2713991
26	8.0	2.4	0.0	chr3	149656793	149656822	(48638737)	+	(AC)n	Simple_repeat	2	31	(0)	2713992
616	33.2	7.4	3.5	chr3	149852879	149853396	(48442163)	C	L1ME3G	LINE/L1	(184)	740	201	2714319
65	1.7	0.0	0.0	chr3	149853442	149853501	(48442058)	+	(GA)n	Simple_repeat	1	60	(0)	2714320
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
328	22.3	3.1	1.1	chr3	150287429	150287523	(48008036)	C	MER94B	DNA/hAT-Blackjack	(6)	127	31	2714992
49	4.1	0.0	0.0	chr3	150287592	150287642	(48007917)	+	(TC)n	Simple_repeat	1	51	(0)	2714993
418	30.4	8.1	1.3	chr3	150287754	150287903	(48007656)	+	MIRc	SINE/MIR	2	162	(106)	2714994
1732	16.3	8.5	1.1	chr3	151064764	151064945	(47230614)	+	THE1C	LTR/ERVL-MaLR	1	202	(173)	2716279
34	6.3	4.0	0.0	chr3	151064946	151064995	(47230564)	+	(TC)n	Simple_repeat	1	52	(0)	2716280
1732	16.3	8.5	1.1	chr3	151064996	151065159	(47230400)	+	THE1C	LTR/ERVL-MaLR	203	375	(0)	2716279
15	9.2	8.6	0.0	chr3	151086804	151086838	(47208721)	+	(AGCG)n	Simple_repeat	1	38	(0)	2716327
1055	17.8	11.5	0.0	chr3	152271817	152272039	(46023520)	+	MER33	DNA/hAT-Charlie	2	246	(78)	2717976
36	0.0	0.0	0.0	chr3	152272040	152272070	(46023489)	+	(TC)n	Simple_repeat	1	31	(0)	2717977
1055	17.8	11.5	0.0	chr3	152272071	152272132	(46023427)	+	MER33	DNA/hAT-Charlie	247	323	(1)	2717976
29	15.7	0.0	0.0	chr3	152315846	152315866	(45979693)	+	(AC)n	Simple_repeat	1	21	(0)	2718019
33	2.8	2.8	0.0	chr3	152315867	152315902	(45979657)	+	(CT)n	Simple_repeat	1	37	(0)	2718020
29	15.7	0.0	0.0	chr3	152315903	152315932	(45979627)	+	(AC)n	Simple_repeat	2	31	(0)	2718021
81	2.6	0.0	0.0	chr3	152727672	152727749	(45567810)	+	(GA)n	Simple_repeat	1	78	(0)	2718590
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
15	14.4	5.0	2.4	chr3	153162495	153162534	(45133025)	+	(CGC)n	Simple_repeat	1	42	(0)	2719348
245	21.4	3.7	1.1	chr3	153318783	153319425	(44976134)	+	GA-rich	Low_complexity	1	667	(0)	2719602
907	27.8	3.4	2.4	chr3	153442450	153442737	(44852822)	+	L1M5	LINE/L1	5362	5652	(542)	2719773
66	10.9	0.0	1.0	chr3	153442763	153442863	(44852696)	+	(GA)n	Simple_repeat	1	101	(0)	2719774
58	1.9	0.0	0.0	chr3	154380158	154380211	(43915348)	+	(GA)n	Simple_repeat	1	54	(0)	2721101
36	2.9	0.0	0.0	chr3	154430123	154430157	(43865402)	+	(GA)n	Simple_repeat	1	35	(0)	2721162
642	21.9	6.9	9.4	chr3	155060696	155060829	(43234730)	C	MLT1A0	LTR/ERVL-MaLR	(63)	302	161	2721981
46	2.3	0.0	0.0	chr3	155060830	155060873	(43234686)	+	(AG)n	Simple_repeat	1	44	(0)	2721982
642	21.9	6.9	9.4	chr3	155060874	155061035	(43234524)	C	MLT1A0	LTR/ERVL-MaLR	(205)	160	14	2721981
2230	21.7	4.8	2.6	chr3	155526152	155526370	(42769189)	+	MLT1F2	LTR/ERVL-MaLR	1	224	(336)	2722597
84	6.3	3.4	0.0	chr3	155526371	155526487	(42769072)	+	(CT)n	Simple_repeat	1	121	(0)	2722598
49	0.0	0.0	0.0	chr3	155526490	155526531	(42769028)	+	(AC)n	Simple_repeat	1	42	(0)	2722599
2230	21.7	4.8	2.6	chr3	155526532	155526851	(42768708)	+	MLT1F2	LTR/ERVL-MaLR	225	556	(4)	2722597
1044	30.0	11.2	6.1	chr3	156658325	156659276	(41636283)	C	LTR78	LTR/ERV1	(143)	1161	155	2724365
13	5.3	0.0	0.0	chr3	156826640	156826659	(41468900)	+	(CCT)n	Simple_repeat	1	20	(0)	2724616
1963	14.3	0.0	0.0	chr3	157071534	157071806	(41223753)	+	AluSz6	SINE/Alu	1	273	(39)	2724928
191	15.2	6.9	0.4	chr3	157071807	157072238	(41223321)	+	GA-rich	Low_complexity	1	462	(0)	2724929
185	27.4	11.4	5.8	chr3	157130496	157130685	(41164874)	+	MIRc	SINE/MIR	20	221	(47)	2725023
18	18.5	2.3	0.0	chr3	157176932	157176992	(41118567)	+	(ATAAT)n	Simple_repeat	1	62	(0)	2725097
20	0.0	0.0	0.0	chr3	157177027	157177048	(41118511)	+	(TC)n	Simple_repeat	1	22	(0)	2725098
2148	13.2	0.0	0.3	chr3	157177049	157177335	(41118224)	C	AluSz	SINE/Alu	(22)	290	5	2725099
78	3.8	1.2	0.0	chr3	157252470	157252552	(41043007)	+	(AG)n	Simple_repeat	1	84	(0)	2725230
1867	17.4	0.3	0.7	chr3	157274512	157274799	(41020760)	C	AluJr4	SINE/Alu	(25)	287	1	2725259
2765	25.8	12.9	6.0	chr3	157488167	157488910	(40806649)	+	L2	LINE/L2	1816	2566	(853)	2725577
46	2.3	0.0	0.0	chr3	157488911	157488954	(40806605)	+	(TC)n	Simple_repeat	1	44	(0)	2725578
2765	25.8	12.9	6.0	chr3	157488955	157489383	(40806176)	+	L2	LINE/L2	2567	3081	(338)	2725577
34	27.5	1.6	2.4	chr3	158105768	158105890	(40189669)	+	(CCG)n	Simple_repeat	1	125	(0)	2726362
68	0.0	3.1	0.0	chr3	158106572	158106636	(40188923)	+	(AG)n	Simple_repeat	1	67	(0)	2726364
77	8.1	0.0	0.0	chr3	158827882	158827985	(39467574)	+	(GA)n	Simple_repeat	1	104	(0)	2727371
34	3.0	0.0	0.0	chr3	159345547	159345580	(38949979)	+	(TC)n	Simple_repeat	1	34	(0)	2728122
13	13.1	0.0	0.0	chr3	159345581	159345605	(38949954)	+	(ACTC)n	Simple_repeat	1	25	(0)	2728123
1690	15.2	1.2	0.8	chr3	159712445	159712700	(38582859)	+	AluJo	SINE/Alu	11	267	(45)	2728619
74	26.1	1.3	7.0	chr3	159712703	159712879	(38582680)	+	GA-rich	Low_complexity	1	161	(0)	2728620
2235	10.5	2.9	0.0	chr3	159712880	159713183	(38582376)	+	AluSp	SINE/Alu	1	313	(0)	2728621
12	13.8	4.4	6.4	chr3	159765903	159765947	(38529612)	+	G-rich	Low_complexity	1	47	(0)	2728703
15	9.1	0.0	0.0	chr3	159866456	159866479	(38429080)	+	(TTG)n	Simple_repeat	1	24	(0)	2728864
17	24.0	0.0	0.0	chr3	159897506	159897544	(38398015)	+	(GT)n	Simple_repeat	1	39	(0)	2728907
532	27.8	11.5	4.1	chr3	159967148	159967230	(38328329)	+	L2a	LINE/L2	3053	3154	(272)	2729038
56	0.0	0.0	0.0	chr3	159967231	159967278	(38328281)	+	(TC)n	Simple_repeat	1	48	(0)	2729039
532	27.8	11.5	4.1	chr3	159967279	159967539	(38328020)	+	L2a	LINE/L2	3155	3426	(0)	2729038
13	15.6	0.0	7.3	chr3	159988976	159989016	(38306543)	+	(AGACAG)n	Simple_repeat	1	41	(0)	2729076
2128	12.7	1.0	0.0	chr3	160440630	160440921	(37854638)	+	AluSp	SINE/Alu	1	295	(18)	2729777
235	20.4	9.3	6.7	chr3	160449195	160449299	(37846260)	+	MIR	SINE/MIR	59	166	(96)	2729796
1410	20.4	12.4	4.6	chr3	160691697	160692149	(37603410)	+	MLT1D	LTR/ERVL-MaLR	1	493	(12)	2730208
11264	13.2	1.8	0.8	chr3	160692217	160694049	(37601510)	+	Tigger1	DNA/TcMar-Tigger	1	1852	(566)	2730209
569	28.9	6.6	3.6	chr3	160698138	160698417	(37597142)	+	Charlie19a	DNA/hAT-Charlie	39	327	(59)	2730217
731	32.8	4.8	12.0	chr3	160745326	160746267	(37549292)	C	L2b	LINE/L2	(1)	3374	2517	2730297
29	0.0	0.0	0.0	chr3	160746271	160746295	(37549264)	+	(AG)n	Simple_repeat	1	25	(0)	2730298
43	2.5	0.0	0.0	chr3	160836317	160836357	(37459202)	+	(AG)n	Simple_repeat	1	41	(0)	2730442
213	29.1	14.4	7.5	chr3	160836369	160836530	(37459029)	+	MIR3	SINE/MIR	8	172	(36)	2730443
1588	18.4	3.6	7.5	chr3	160840381	160840726	(37454833)	C	MLT2B3	LTR/ERVL	(0)	554	223	2730452
71	9.7	1.0	0.0	chr3	160840727	160840828	(37454731)	+	(AG)n	Simple_repeat	1	103	(0)	2730453
1334	15.4	5.2	0.9	chr3	160840829	160841051	(37454508)	C	MLT2B3	LTR/ERVL	(321)	233	1	2730452
33	12.8	0.0	0.0	chr3	161452461	161452511	(36843048)	+	(GT)n	Simple_repeat	1	51	(0)	2731367
246	15.2	0.0	2.1	chr3	161538462	161538508	(36757051)	C	MLT2C2	LTR/ERVL	(6)	550	505	2731491
50	6.9	0.0	0.0	chr3	161538511	161538571	(36756988)	+	(CT)n	Simple_repeat	1	61	(0)	2731492
33	0.0	0.0	0.0	chr3	161538572	161538607	(36756952)	+	(AC)n	Simple_repeat	1	36	(0)	2731493
36	2.9	0.0	0.0	chr3	161538608	161538642	(36756917)	+	(AG)n	Simple_repeat	1	35	(0)	2731494
1756	16.8	11.8	0.3	chr3	161538646	161539004	(36756555)	C	MLT2C2	LTR/ERVL	(58)	406	1	2731491
28	12.7	0.0	0.0	chr3	161576729	161576771	(36718788)	+	(TC)n	Simple_repeat	1	43	(0)	2731552
99	5.4	0.9	0.0	chr3	165196874	165196988	(33098571)	+	(TC)n	Simple_repeat	1	116	(0)	2735886
845	29.9	5.0	9.6	chr3	167254507	167255183	(31040376)	+	HAL1b	LINE/L1	1050	1693	(728)	2738495
39	13.9	4.1	0.0	chr3	167900933	167901005	(30394554)	+	GA-rich	Low_complexity	1	76	(0)	2739344
1602	22.8	4.3	3.6	chr3	167926789	167927156	(30368403)	+	MLT2D	LTR/ERVL	1	361	(53)	2739373
35	2.7	2.6	0.0	chr3	167927157	167927194	(30368365)	+	(TC)n	Simple_repeat	1	39	(0)	2739374
1602	22.8	4.3	3.6	chr3	167927195	167927216	(30368343)	+	MLT2D	LTR/ERVL	362	393	(21)	2739373
676	15.0	16.5	0.7	chr3	168091970	168092117	(30203442)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	2739589
301	28.9	7.6	1.0	chr3	168093363	168093460	(30202099)	C	L2b	LINE/L2	(9)	3366	3262	2739592
58	1.7	3.3	0.0	chr3	168211674	168211734	(30083825)	+	(AG)n	Simple_repeat	1	63	(0)	2739748
1390	28.2	5.8	1.0	chr3	168442363	168442752	(29852807)	C	L3	LINE/CR1	(3664)	435	26	2740066
534	26.0	1.7	2.2	chr3	168485275	168485455	(29810104)	+	MER104	DNA/TcMar-Tc2	2	181	(0)	2740139
435	25.4	7.4	4.2	chr3	168485456	168485509	(29810050)	C	MIRb	SINE/MIR	(159)	109	56	2740138
668	29.3	9.4	5.6	chr3	168624803	168625373	(29670186)	+	MLT1G3	LTR/ERVL-MaLR	1	595	(0)	2740318
35	11.8	1.8	0.0	chr3	169147711	169147766	(29147793)	+	(GT)n	Simple_repeat	1	57	(0)	2740986
15	20.6	3.9	1.9	chr3	169147844	169147895	(29147664)	+	G-rich	Low_complexity	1	54	(0)	2740987
1382	23.3	0.3	10.6	chr3	169373942	169374127	(28921432)	+	MLT1A	LTR/ERVL-MaLR	1	174	(200)	2741250
30	3.5	0.0	0.0	chr3	169374128	169374157	(28921402)	+	(TC)n	Simple_repeat	1	30	(0)	2741251
1382	23.3	0.3	10.6	chr3	169374158	169374387	(28921172)	+	MLT1A	LTR/ERVL-MaLR	175	374	(0)	2741250
25	19.4	0.0	0.0	chr3	169583446	169583493	(28712066)	+	(CT)n	Simple_repeat	1	48	(0)	2741514
42	8.0	0.0	0.0	chr3	169604222	169604275	(28691284)	+	(TC)n	Simple_repeat	1	54	(0)	2741538
355	23.5	0.0	0.0	chr3	169604362	169604429	(28691130)	C	MIR3	SINE/MIR	(48)	160	93	2741539
15	5.5	0.0	0.0	chr3	169626484	169626502	(28669057)	+	(CT)n	Simple_repeat	1	19	(0)	2741576
21	15.6	4.2	5.3	chr3	169670937	169670955	(28624604)	+	(TGT)n	Simple_repeat	1	15	(0)	2741647
30	0.0	3.5	0.0	chr3	169670956	169670984	(28624575)	+	(GA)n	Simple_repeat	1	30	(0)	2741648
21	15.6	4.2	5.3	chr3	169670985	169671036	(28624523)	+	(TGT)n	Simple_repeat	1	55	(0)	2741649
2218	11.7	0.3	0.0	chr3	169671037	169671336	(28624223)	C	AluSx	SINE/Alu	(11)	301	1	2741650
259	34.2	0.8	7.1	chr3	169966232	169966357	(28329202)	+	MIR3	SINE/MIR	26	143	(65)	2742118
309	28.1	2.8	1.9	chr3	169966448	169966552	(28329007)	+	MER5A	DNA/hAT-Charlie	78	183	(6)	2742119
26	0.0	0.0	0.0	chr3	170038081	170038105	(28257454)	+	(GCGGG)n	Simple_repeat	1	25	(0)	2742256
26	5.8	2.8	0.0	chr3	170249380	170249415	(28046144)	+	(GA)n	Simple_repeat	1	37	(0)	2742668
1782	17.3	0.0	2.6	chr3	170249508	170249813	(28045746)	+	AluJo	SINE/Alu	2	299	(13)	2742669
1433	17.0	0.5	0.0	chr3	170347485	170347707	(27947852)	C	AluSx3	SINE/Alu	(0)	311	88	2742864
27	6.0	0.0	0.0	chr3	170347708	170347742	(27947817)	+	(AG)n	Simple_repeat	1	35	(0)	2742865
490	22.0	5.5	2.6	chr3	170814815	170814979	(27480580)	+	MamGypLTR2b	LTR/Gypsy	667	905	(17)	2743630
43	2.2	2.0	2.0	chr3	170815022	170815070	(27480489)	+	(TC)n	Simple_repeat	1	50	(0)	2743632
1685	16.0	4.7	0.8	chr3	170815075	170815337	(27480222)	C	AluJr	SINE/Alu	(37)	275	2	2743633
17	5.0	0.0	0.0	chr3	171199206	171199226	(27096333)	+	(A)n	Simple_repeat	1	21	(0)	2744161
300	19.4	0.0	4.6	chr3	171199464	171199528	(27096031)	C	MIR	SINE/MIR	(0)	262	201	2744162
853	17.4	1.2	1.8	chr3	171351997	171352160	(26943399)	C	MER5A1	DNA/hAT-Charlie	(3)	163	1	2744388
182	26.8	0.0	2.4	chr3	171452403	171452444	(26843115)	C	MER5A	DNA/hAT-Charlie	(52)	137	97	2744547
278	26.1	11.5	8.5	chr3	171452413	171452588	(26842971)	C	MIR3	SINE/MIR	(26)	182	1	2744548
59	3.5	0.0	0.0	chr3	171532884	171532942	(26762617)	+	(AG)n	Simple_repeat	1	59	(0)	2744717
4142	14.6	3.5	7.9	chr3	171532943	171533580	(26761979)	C	MLT2B5	LTR/ERVL	(79)	638	3	2744716
256	18.4	5.8	0.0	chr3	171700186	171700234	(26595325)	+	MLT1L	LTR/ERVL-MaLR	105	156	(406)	2744952
286	22.5	2.7	2.7	chr3	171700228	171700300	(26595259)	+	MLT1L	LTR/ERVL-MaLR	207	279	(331)	2744952
27	3.2	0.0	0.0	chr3	171700304	171700335	(26595224)	+	(AC)n	Simple_repeat	1	32	(0)	2744953
48	14.7	0.0	0.0	chr3	171700335	171700411	(26595148)	+	(CT)n	Simple_repeat	1	77	(0)	2744954
16	14.2	0.0	0.0	chr3	171810484	171810514	(26485045)	+	(GGGA)n	Simple_repeat	1	31	(0)	2745122
184	35.4	1.5	0.0	chr3	171810841	171810905	(26484654)	C	MIRc	SINE/MIR	(121)	147	82	2745123
30	19.1	3.0	0.0	chr3	171895397	171895462	(26400097)	+	(CT)n	Simple_repeat	1	68	(0)	2745252
34	0.0	0.0	0.0	chr3	172045767	172045795	(26249764)	+	(TC)n	Simple_repeat	1	29	(0)	2745536
32	14.0	1.8	0.0	chr3	172562937	172562991	(25732568)	+	GA-rich	Low_complexity	1	56	(0)	2746307
2271	11.2	0.6	0.6	chr3	172712416	172712727	(25582832)	C	AluSq2	SINE/Alu	(0)	313	2	2746560
59	0.0	0.0	0.0	chr3	172712728	172712777	(25582782)	+	(CT)n	Simple_repeat	1	50	(0)	2746561
1834	20.0	12.5	5.8	chr3	172837148	172837593	(25457966)	+	MLT2B3	LTR/ERVL	1	475	(79)	2746778
38	7.9	1.9	0.0	chr3	172837594	172837647	(25457912)	+	(TC)n	Simple_repeat	1	55	(0)	2746779
1834	20.0	12.5	5.8	chr3	172837648	172837715	(25457844)	+	MLT2B3	LTR/ERVL	476	553	(1)	2746778
32	4.5	0.0	4.0	chr3	173224211	173224246	(25071313)	+	(TCTT)n	Simple_repeat	1	35	(0)	2747270
57	0.0	0.0	0.0	chr3	173224247	173224295	(25071264)	+	(TC)n	Simple_repeat	1	49	(0)	2747271
32	4.5	0.0	4.0	chr3	173224296	173224308	(25071251)	+	(TCTT)n	Simple_repeat	4	16	(0)	2747272
970	9.5	0.0	0.0	chr3	173224309	173224424	(25071135)	C	AluSz	SINE/Alu	(196)	116	1	2747273
1460	9.9	6.7	0.9	chr3	173286589	173286800	(25008759)	+	AluY	SINE/Alu	70	294	(17)	2747356
31	11.2	0.0	0.0	chr3	173286801	173286850	(25008709)	+	(GAGA)n	Simple_repeat	1	50	(0)	2747357
101	17.1	4.0	1.3	chr3	173367448	173367675	(24927884)	+	(TA)n	Simple_repeat	1	237	(0)	2747471
42	5.9	0.0	0.0	chr3	173367675	173367727	(24927832)	+	(AG)n	Simple_repeat	1	53	(0)	2747472
41	2.6	0.0	0.0	chr3	173415905	173415944	(24879615)	+	(AG)n	Simple_repeat	1	40	(0)	2747533
375	30.1	6.7	5.0	chr3	173415945	173416003	(24879556)	+	MIR	SINE/MIR	209	259	(3)	2747532
1775	18.8	0.5	6.2	chr3	173675656	173675823	(24619736)	+	L1MD2	LINE/L1	5971	6132	(227)	2747870
44	9.9	0.0	0.0	chr3	173675824	173675888	(24619671)	+	(CT)n	Simple_repeat	1	65	(0)	2747871
1775	18.8	0.5	6.2	chr3	173675889	173676122	(24619437)	+	L1MD2	LINE/L1	6133	6350	(9)	2747870
26	0.0	0.0	0.0	chr3	173935594	173935622	(24359937)	+	(AC)n	Simple_repeat	1	29	(0)	2748236
41	2.5	0.0	0.0	chr3	173935623	173935662	(24359897)	+	(CT)n	Simple_repeat	1	40	(0)	2748237
57	0.0	0.0	0.0	chr3	174066517	174066565	(24228994)	+	(TC)n	Simple_repeat	1	49	(0)	2748436
24	0.0	0.0	0.0	chr3	174066566	174066591	(24228968)	+	(GT)n	Simple_repeat	1	26	(0)	2748437
289	37.3	0.0	6.0	chr3	174076527	174076677	(24218882)	+	L2b	LINE/L2	3051	3192	(183)	2748449
54	0.0	0.0	0.0	chr3	174076680	174076725	(24218834)	+	(AG)n	Simple_repeat	1	46	(0)	2748450
34	0.0	0.0	0.0	chr3	174076726	174076762	(24218797)	+	(TG)n	Simple_repeat	1	37	(0)	2748451
1868	21.0	10.7	3.6	chr3	174106604	174106980	(24188579)	C	MLT2B2	LTR/ERVL	(0)	515	94	2748498
44	0.0	0.0	0.0	chr3	174106981	174107018	(24188541)	+	(CA)n	Simple_repeat	1	38	(0)	2748499
1868	21.0	10.7	3.6	chr3	174107019	174107115	(24188444)	C	MLT2B2	LTR/ERVL	(422)	93	3	2748498
4599	18.7	3.4	3.1	chr3	174107116	174108315	(24187244)	C	L1MD1	LINE/L1	(75)	6558	5349	2748497
347	25.3	18.9	0.0	chr3	174440450	174440599	(23854960)	C	MIR	SINE/MIR	(0)	262	78	2748989
30	3.5	0.0	0.0	chr3	174765114	174765143	(23530416)	+	(AC)n	Simple_repeat	1	30	(0)	2749448
37	2.8	0.0	0.0	chr3	174765144	174765179	(23530380)	+	(GA)n	Simple_repeat	1	36	(0)	2749449
68	6.0	0.0	0.0	chr3	175011235	175011321	(23284238)	+	(AG)n	Simple_repeat	1	87	(0)	2749806
41	0.0	0.0	0.0	chr3	175463702	175463736	(22831823)	+	(GA)n	Simple_repeat	1	35	(0)	2750408
641	24.1	6.5	1.1	chr3	175504368	175504534	(22791025)	+	MLT1B	LTR/ERVL-MaLR	1	178	(212)	2750466
77	4.8	1.1	0.0	chr3	175504535	175504621	(22790938)	+	(TC)n	Simple_repeat	1	88	(0)	2750468
641	27.7	11.5	118.0	chr3	175504622	175504675	(22790884)	+	MLT1B	LTR/ERVL-MaLR	176	249	(125)	2750466
315	18.8	1.5	0.0	chr3	175504685	175504748	(22790811)	+	MLT1B	LTR/ERVL-MaLR	315	379	(11)	2750466
1351	17.6	16.9	0.3	chr3	175632084	175632266	(22663293)	+	MSTA	LTR/ERVL-MaLR	1	207	(221)	2750651
51	0.0	0.0	0.0	chr3	175632267	175632310	(22663249)	+	(TC)n	Simple_repeat	1	44	(0)	2750652
1351	17.6	16.9	0.3	chr3	175632311	175632416	(22663143)	+	MSTA	LTR/ERVL-MaLR	208	347	(81)	2750651
1519	19.2	9.2	0.9	chr3	176025809	176025992	(22269567)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	197	2751142
82	0.0	0.0	0.0	chr3	176025993	176026062	(22269497)	+	(GA)n	Simple_repeat	1	70	(0)	2751143
1519	19.2	9.2	0.9	chr3	176026063	176026214	(22269345)	C	MLT1B	LTR/ERVL-MaLR	(194)	196	21	2751142
766	22.6	2.4	1.8	chr3	177172477	177172640	(21122919)	+	FRAM	SINE/Alu	1	165	(11)	2752718
15	23.0	4.2	5.3	chr3	177172641	177172662	(21122897)	+	GA-rich	Low_complexity	1	70	(0)	2752719
25	7.9	0.0	4.4	chr3	177172663	177172707	(21122852)	+	(GAGGG)n	Simple_repeat	1	45	(0)	2752720
56	1.9	0.0	0.0	chr3	177958174	177958225	(20337334)	+	(GA)n	Simple_repeat	1	52	(0)	2754024
20	14.6	5.4	1.7	chr3	178058008	178058035	(20237524)	+	(TCTA)n	Simple_repeat	1	30	(0)	2754167
46	0.0	0.0	0.0	chr3	178058036	178058074	(20237485)	+	(TC)n	Simple_repeat	1	39	(0)	2754168
20	14.6	5.4	1.7	chr3	178058075	178058101	(20237458)	+	(TCTA)n	Simple_repeat	3	29	(0)	2754169
68	22.7	2.4	0.6	chr3	178535118	178535285	(19760274)	+	GA-rich	Low_complexity	1	172	(0)	2754832
239	31.7	11.4	0.0	chr3	178654989	178655089	(19640470)	+	MIRb	SINE/MIR	145	258	(10)	2754998
60	3.4	0.0	0.0	chr3	178655090	178655149	(19640410)	+	(CT)n	Simple_repeat	1	60	(0)	2754999
188	29.7	1.5	3.0	chr3	179068099	179068164	(19227395)	C	L3b	LINE/CR1	(2)	5230	5166	2755558
45	2.4	0.0	0.0	chr3	179117275	179117317	(19178242)	+	(AG)n	Simple_repeat	1	43	(0)	2755661
7858	11.2	3.4	15.8	chr3	179117468	179118820	(19176739)	+	L1M1	LINE/L1	2549	3863	(2283)	2755662
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
1956	11.8	5.6	0.3	chr3	180815908	180816194	(17479365)	+	AluSq2	SINE/Alu	1	303	(10)	2758369
69	0.0	3.0	0.0	chr3	180816197	180816262	(17479297)	+	(TC)n	Simple_repeat	1	68	(0)	2758370
1426	19.0	3.6	3.0	chr3	180816263	180816306	(17479253)	+	MLT2D	LTR/ERVL	368	414	(0)	2758368
899	24.2	3.3	0.9	chr3	180816340	180816572	(17478987)	C	MamRep4096	DNA/hAT?	(186)	240	2	2758365
914	26.1	7.0	3.5	chr3	181330727	181331040	(16964519)	+	UCON78	DNA	3	328	(115)	2759171
40	2.6	0.0	0.0	chr3	181518272	181518310	(16777249)	+	(TC)n	Simple_repeat	1	39	(0)	2759443
256	19.4	3.1	3.1	chr3	181550290	181550353	(16745206)	C	LTR85a	LTR/Gypsy?	(714)	70	7	2759499
23	3.7	0.0	0.0	chr3	181550354	181550381	(16745178)	+	(CT)n	Simple_repeat	1	28	(0)	2759500
48	4.1	0.0	0.0	chr3	181550382	181550431	(16745128)	+	(CA)n	Simple_repeat	1	50	(0)	2759501
1863	23.6	5.5	8.4	chr3	181550498	181551056	(16744503)	+	MER119	DNA/hAT-Charlie	1	542	(41)	2759502
35	31.6	0.0	1.7	chr3	181621934	181622053	(16673506)	+	GA-rich	Low_complexity	1	120	(0)	2759614
245	18.6	0.0	0.0	chr3	181622059	181622101	(16673458)	C	L2a	LINE/L2	(251)	3124	3082	2759609
40	4.5	2.1	0.0	chr3	181699496	181699542	(16596017)	+	(CT)n	Simple_repeat	1	48	(0)	2759743
16	12.6	5.6	0.0	chr3	181712034	181712069	(16583490)	+	GA-rich	Low_complexity	1	38	(0)	2759750
34	9.1	0.0	0.0	chr3	182015683	182015729	(16279830)	+	(AG)n	Simple_repeat	1	47	(0)	2760425
38	4.9	0.0	0.0	chr3	182075015	182075056	(16220503)	+	(GA)n	Simple_repeat	1	42	(0)	2760502
370	37.8	6.7	1.6	chr3	182075201	182075442	(16220117)	C	MIRc	SINE/MIR	(2)	266	12	2760503
643	21.9	0.0	14.0	chr3	182558746	182558952	(15736607)	+	MLT1B	LTR/ERVL-MaLR	1	178	(196)	2761205
66	19.8	0.7	0.7	chr3	182558963	182559097	(15736462)	+	(CT)n	Simple_repeat	1	136	(0)	2761206
961	23.6	0.0	0.0	chr3	182559112	182559310	(15736249)	+	MLT1B	LTR/ERVL-MaLR	192	390	(0)	2761205
46	8.7	0.0	0.0	chr3	182636435	182636496	(15659063)	+	(TC)n	Simple_repeat	1	62	(0)	2761322
30	2.9	0.0	0.0	chr3	182636497	182636531	(15659028)	+	(AC)n	Simple_repeat	1	35	(0)	2761323
36	8.2	1.9	0.0	chr3	182657988	182658039	(15637520)	+	(AG)n	Simple_repeat	1	53	(0)	2761360
3337	17.1	3.8	8.1	chr3	182690924	182691554	(15604005)	+	L1MC3	LINE/L1	6281	6867	(918)	2761418
44	0.0	0.0	0.0	chr3	182691555	182691592	(15603967)	+	(CA)n	Simple_repeat	1	38	(0)	2761419
3337	17.1	3.8	8.1	chr3	182691593	182691820	(15603739)	+	L1MC3	LINE/L1	6868	7101	(684)	2761418
2239	14.3	8.4	1.0	chr3	182959712	182960128	(15335431)	+	MSTB2	LTR/ERVL-MaLR	1	451	(6)	2761833
1910	14.9	15.7	12.6	chr3	183442046	183442248	(14853311)	C	LTR54	LTR/ERV1	(96)	414	170	2762678
33	0.0	0.0	0.0	chr3	183442249	183442276	(14853283)	+	(TC)n	Simple_repeat	1	28	(0)	2762680
1910	14.9	15.7	12.6	chr3	183442277	183442462	(14853097)	C	LTR54	LTR/ERV1	(341)	169	1	2762678
61	22.1	0.0	0.0	chr3	183882223	183882417	(14413142)	+	(AT)n	Simple_repeat	1	195	(0)	2763576
24	3.6	0.0	0.0	chr3	183882417	183882445	(14413114)	+	(AG)n	Simple_repeat	1	29	(0)	2763577
1396	8.4	4.2	3.1	chr3	183911564	183911754	(14383805)	C	AluSq4	SINE/Alu	(118)	193	1	2763645
59	31.2	2.3	0.5	chr3	183911755	183911929	(14383630)	+	(TCTC)n	Simple_repeat	3	180	(0)	2763646
968	17.2	1.8	0.0	chr3	183911931	183912093	(14383466)	C	AluJr4	SINE/Alu	(12)	300	135	2763647
578	24.3	2.3	4.2	chr3	183912121	183912302	(14383257)	+	MIR	SINE/MIR	34	218	(50)	2763648
226	30.0	7.0	0.0	chr3	184250189	184250268	(14045291)	+	MIRc	SINE/MIR	46	131	(137)	2764294
1926	15.4	1.0	2.8	chr3	184263341	184263637	(14031922)	+	AluSz6	SINE/Alu	1	292	(20)	2764319
57	0.0	0.0	0.0	chr3	184263638	184263686	(14031873)	+	(AG)n	Simple_repeat	1	49	(0)	2764320
1926	15.4	1.0	2.8	chr3	184263687	184263706	(14031853)	+	AluSz6	SINE/Alu	293	312	(0)	2764319
2325	10.9	0.0	0.0	chr3	184263740	184263908	(14031651)	C	AluSx3	SINE/Alu	(7)	304	136	2764321
79	30.8	2.9	0.7	chr3	184542556	184542587	(13752972)	+	GA-rich	Low_complexity	1	35	(249)	2764864
16	9.8	0.0	0.0	chr3	184542588	184542609	(13752950)	+	(G)n	Simple_repeat	1	22	(0)	2764865
79	30.8	2.9	0.7	chr3	184542610	184542831	(13752728)	+	GA-rich	Low_complexity	36	284	(0)	2764864
1819	15.6	3.4	0.3	chr3	184794660	184794941	(13500618)	+	AluJb	SINE/Alu	1	291	(21)	2765337
71	23.8	1.6	1.1	chr3	184794942	184795111	(13500448)	+	GA-rich	Low_complexity	15	187	(0)	2765338
345	18.7	1.3	1.3	chr3	184795113	184795188	(13500371)	+	MIRc	SINE/MIR	85	160	(108)	2765339
12	8.8	4.2	0.0	chr3	185152947	185152970	(13142589)	+	(GCG)n	Simple_repeat	1	25	(0)	2765862
216	31.3	1.5	0.0	chr3	185537623	185537696	(12757863)	+	MIR1_Amn	SINE/MIR	40	119	(111)	2766587
2030	14.5	0.7	0.0	chr3	185537810	185538105	(12757454)	C	AluJb	SINE/Alu	(14)	298	1	2766588
56	0.0	0.0	0.0	chr3	185811831	185811878	(12483681)	+	(TC)n	Simple_repeat	1	48	(0)	2767139
21	23.0	3.4	4.4	chr3	185825048	185825135	(12470424)	+	(CCGC)n	Simple_repeat	1	91	(0)	2767149
17	15.6	0.0	0.0	chr3	185825220	185825248	(12470311)	+	(CT)n	Simple_repeat	1	29	(0)	2767150
11	18.4	2.4	4.8	chr3	185825251	185825291	(12470268)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	2767151
16	18.1	0.0	6.1	chr3	185825360	185825408	(12470151)	+	(CCCCG)n	Simple_repeat	1	49	(0)	2767152
16	9.4	10.6	1.9	chr3	186783214	186783260	(11512299)	+	(CTCCGG)n	Simple_repeat	1	52	(0)	2768981
2034	14.3	4.7	8.8	chr3	187146340	187146737	(11148822)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2769661
15	13.9	0.0	0.0	chr3	187559414	187559437	(10736122)	+	(T)n	Simple_repeat	1	24	(0)	2770325
49	7.2	4.0	0.0	chr3	187559457	187559531	(10736028)	+	(CT)n	Simple_repeat	1	78	(0)	2770326
13	7.7	0.0	9.1	chr3	187559550	187559582	(10735977)	+	(TTCT)n	Simple_repeat	1	33	(0)	2770327
14	26.0	1.7	3.3	chr3	187737285	187737343	(10558216)	+	A-rich	Low_complexity	1	60	(0)	2770626
62	13.5	2.6	1.7	chr3	187737321	187737437	(10558122)	+	GA-rich	Low_complexity	1	120	(0)	2770627
12	31.2	1.6	3.2	chr3	187744737	187744797	(10550762)	+	GA-rich	Low_complexity	1	62	(0)	2770632
16	21.9	1.7	5.1	chr3	187744990	187745047	(10550512)	+	(CTC)n	Simple_repeat	1	59	(0)	2770633
99	12.1	0.0	1.3	chr3	188178960	188179116	(10116443)	+	(GA)n	Simple_repeat	1	157	(0)	2771431
1712	25.5	8.6	9.7	chr3	188249871	188250703	(10044856)	C	L1MC4	LINE/L1	(126)	7916	7090	2771565
131	3.9	4.6	2.0	chr3	188250704	188250898	(10044661)	+	(TCTT)n	Simple_repeat	1	204	(0)	2771567
65	10.0	5.9	0.8	chr3	188262615	188262733	(10032826)	+	(CT)n	Simple_repeat	1	126	(0)	2771588
376	31.8	9.4	2.9	chr3	188262764	188262921	(10032638)	C	MIRc	SINE/MIR	(62)	168	1	2771589
196	36.6	3.6	5.6	chr3	188263999	188264140	(10031419)	+	L2b	LINE/L2	3141	3279	(96)	2771590
33	7.2	0.0	0.0	chr3	188264271	188264314	(10031245)	+	(GA)n	Simple_repeat	1	44	(0)	2771593
272	25.3	1.2	12.6	chr3	188274367	188274461	(10021098)	+	L2c	LINE/L2	3281	3386	(40)	2771615
313	11.1	0.0	0.0	chr3	188411905	188411949	(9883610)	+	MADE1	DNA/TcMar-Mariner	36	80	(0)	2771873
43	4.5	0.0	0.0	chr3	188411953	188411998	(9883561)	+	(CT)n	Simple_repeat	1	46	(0)	2771874
96	22.6	3.2	4.2	chr3	188433568	188433803	(9861756)	+	GA-rich	Low_complexity	1	233	(0)	2771902
19	14.2	0.0	0.0	chr3	190045509	190045551	(8250008)	+	(GA)n	Simple_repeat	1	43	(0)	2774491
999	22.6	5.0	13.6	chr3	190045569	190045839	(8249720)	+	MLT2C1	LTR/ERVL	17	263	(134)	2774492
21	17.3	0.0	0.0	chr3	190120671	190120711	(8174848)	+	(GCA)n	Simple_repeat	1	41	(0)	2774610
56	23.6	3.0	3.9	chr3	190862283	190862482	(7433077)	+	GA-rich	Low_complexity	1	198	(0)	2775747
15	19.6	0.0	0.0	chr3	190863075	190863109	(7432450)	+	G-rich	Low_complexity	1	35	(0)	2775748
287	30.6	10.2	3.1	chr3	190974104	190974329	(7321230)	C	L4_C_Mam	LINE/RTE-X	(492)	4646	4403	2775907
51	2.1	0.0	0.0	chr3	190995758	190995805	(7299754)	+	(GA)n	Simple_repeat	1	48	(0)	2775928
1707	24.2	14.0	2.6	chr3	191774403	191774986	(6520573)	+	MER76	LTR/ERVL	2	663	(28)	2776987
38	2.8	0.0	0.0	chr3	192853019	192853055	(5442504)	+	(TC)n	Simple_repeat	1	37	(0)	2778562
1687	16.7	6.1	3.3	chr3	192928538	192928871	(5366688)	C	MLT2C1	LTR/ERVL	(52)	345	2	2778711
204	35.0	12.1	5.2	chr3	192928874	192929256	(5366303)	C	L2c	LINE/L2	(3)	3384	2972	2778712
41	13.1	1.3	1.3	chr3	193060157	193060233	(5235326)	+	GA-rich	Low_complexity	1	78	(0)	2778934
2298	15.6	5.8	0.2	chr3	193082547	193082739	(5212820)	+	MSTA	LTR/ERVL-MaLR	1	217	(211)	2778969
49	0.0	0.0	0.0	chr3	193082740	193082781	(5212778)	+	(CT)n	Simple_repeat	1	42	(0)	2778970
2298	15.6	5.8	0.2	chr3	193082782	193082991	(5212568)	+	MSTA	LTR/ERVL-MaLR	218	427	(1)	2778969
451	25.0	1.9	3.8	chr3	193960985	193961142	(4334417)	+	MER131	DNA?	2	156	(59)	2780274
763	24.8	6.9	4.6	chr3	193992508	193992748	(4302811)	+	LTR16	LTR/ERVL	61	307	(131)	2780331
119	8.1	7.7	0.0	chr3	193992750	193992958	(4302601)	+	GA-rich	Low_complexity	1	225	(0)	2780332
471	21.8	3.5	0.0	chr3	193992978	193993087	(4302472)	C	L1MEj	LINE/L1	(713)	1447	1334	2780333
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
572	30.7	1.0	6.4	chr3	194350403	194350621	(3944938)	+	MIRb	SINE/MIR	55	261	(7)	2780982
2285	10.1	0.3	0.0	chr3	194501655	194501950	(3793609)	+	AluSg	SINE/Alu	1	297	(13)	2781237
616	23.0	0.2	3.0	chr3	194501951	194502128	(3793431)	+	FLAM_C	SINE/Alu	4	302	(0)	2781236
509	30.6	7.5	1.1	chr3	194975665	194975839	(3319720)	+	MIR3	SINE/MIR	3	189	(19)	2782167
37	0.0	0.0	0.0	chr3	194975841	194975872	(3319687)	+	(TC)n	Simple_repeat	1	32	(0)	2782168
28	0.0	0.0	0.0	chr3	194975873	194975903	(3319656)	+	(AC)n	Simple_repeat	1	31	(0)	2782169
2306	9.9	0.3	0.0	chr3	195204063	195204355	(3091204)	+	AluSg4	SINE/Alu	1	294	(16)	2782535
20	7.8	0.0	0.0	chr3	195204442	195204468	(3091091)	+	(AC)n	Simple_repeat	1	27	(0)	2782536
38	2.8	0.0	0.0	chr3	195204469	195204505	(3091054)	+	(CT)n	Simple_repeat	1	37	(0)	2782537
42	0.0	0.0	0.0	chr3	195252693	195252728	(3042831)	+	(CA)n	Simple_repeat	1	36	(0)	2782603
25	0.0	0.0	0.0	chr3	195252729	195252756	(3042803)	+	(GA)n	Simple_repeat	1	28	(0)	2782604
13	13.1	5.6	9.3	chr3	195270948	195271018	(3024541)	+	(GGCCAGC)n	Simple_repeat	1	75	(0)	2782627
43	7.2	1.7	0.0	chr3	195794374	195794433	(2501126)	+	(AG)n	Simple_repeat	1	61	(0)	2783633
242	15.6	6.2	0.0	chr3	195794434	195794478	(2501081)	C	AluJb	SINE/Alu	(20)	282	235	2783634
1037	18.6	0.6	0.0	chr3	195794481	195794657	(2500902)	C	AluJb	SINE/Alu	(130)	182	5	2783634
2371	9.3	0.3	0.0	chr3	195845257	195845558	(2450001)	+	AluSp	SINE/Alu	1	303	(10)	2783731
35	21.3	2.6	2.5	chr3	195845586	195845741	(2449818)	+	(TTTC)n	Simple_repeat	1	156	(0)	2783732
1283	18.6	4.0	0.5	chr3	195845742	195845961	(2449598)	C	AluJb	SINE/Alu	(0)	312	85	2783733
46	0.0	0.0	2.3	chr3	196113265	196113308	(2182251)	+	(GA)n	Simple_repeat	1	44	(0)	2784254
1552	16.6	4.7	1.7	chr3	196113309	196113424	(2182135)	C	AluJb	SINE/Alu	(194)	118	3	2784253
2384	11.1	0.0	0.0	chr3	196290775	196291081	(2004478)	+	AluSx4	SINE/Alu	1	307	(3)	2784667
35	23.0	1.2	0.0	chr3	196291082	196291164	(2004395)	+	GA-rich	Low_complexity	3	86	(0)	2784668
14	0.0	0.0	0.0	chr3	196432404	196432421	(1863138)	+	(CCG)n	Simple_repeat	1	18	(0)	2784995
13	23.9	0.0	4.2	chr3	197029578	197029625	(1265934)	+	(GCCCCGG)n	Simple_repeat	1	48	(0)	2786243
16	8.8	8.3	0.0	chr3	197029712	197029754	(1265805)	+	G-rich	Low_complexity	1	46	(0)	2786244
1772	10.3	5.3	2.2	chr3	197751359	197751631	(543928)	+	AluSz6	SINE/Alu	1	282	(30)	2787462
447	21.6	2.0	0.0	chr3	197751696	197751792	(543767)	C	MIR	SINE/MIR	(2)	260	162	2787463
115	14.0	6.6	1.4	chr4	828122	828394	(189386161)	+	(TCTGTC)n	Simple_repeat	1	291	(0)	2789583
14	25.5	6.2	0.0	chr4	1346620	1346684	(188867871)	+	(GGCGCGG)n	Simple_repeat	1	69	(0)	2790134
25	6.0	2.9	0.0	chr4	1872557	1872591	(188341964)	+	(GT)n	Simple_repeat	1	36	(0)	2790726
53	0.0	0.0	0.0	chr4	1872592	1872636	(188341919)	+	(GA)n	Simple_repeat	1	45	(0)	2790727
265	25.4	2.0	4.5	chr4	2060376	2060488	(188154067)	C	MIR3	SINE/MIR	(82)	186	73	2791042
56	2.0	0.0	0.0	chr4	2096680	2096731	(188117824)	+	(GA)n	Simple_repeat	1	52	(0)	2791080
2631	19.9	7.1	8.0	chr4	2096732	2097355	(188117200)	C	L1MB4	LINE/L1	(5792)	815	191	2791081
270	23.2	0.9	3.5	chr4	2243849	2244080	(187970475)	+	HERVIP10FH-int	LTR/ERV1	788	1013	(4089)	2791314
16	11.6	3.6	0.0	chr4	2244081	2244108	(187970447)	+	GA-rich	Low_complexity	1	29	(0)	2791315
24	18.1	5.1	5.8	chr4	2261981	2262078	(187952477)	+	(CCGC)n	Simple_repeat	1	103	(0)	2791326
15	3.9	0.0	6.7	chr4	2262601	2262630	(187951925)	+	(CCGGG)n	Simple_repeat	1	30	(0)	2791328
1732	14.2	9.8	10.4	chr4	3151159	3151589	(187062966)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2792851
279	17.8	1.0	2.5	chr4	3725988	3726575	(186487980)	+	G-rich	Low_complexity	1	594	(0)	2793525
193	30.8	11.7	0.0	chr4	3726611	3726701	(186487854)	C	OldhAT1	DNA/hAT-Ac	(1685)	1163	1061	2793526
43	9.1	0.0	0.0	chr4	4303727	4303785	(185910770)	+	(TC)n	Simple_repeat	1	59	(0)	2794467
36	3.9	7.4	0.0	chr4	6106521	6106574	(184107981)	+	(CT)n	Simple_repeat	1	58	(0)	2797751
243	25.9	0.0	0.0	chr4	6927195	6927248	(183287307)	C	L2c	LINE/L2	(70)	3317	3264	2799327
258	27.4	8.6	3.6	chr4	6927306	6927415	(183287140)	+	MIR	SINE/MIR	7	122	(140)	2799328
30	3.4	0.0	0.0	chr4	8044637	8044666	(182169889)	+	(CA)n	Simple_repeat	1	30	(0)	2801140
20	0.0	0.0	0.0	chr4	8044670	8044691	(182169864)	+	(TC)n	Simple_repeat	1	22	(0)	2801141
1463	8.3	8.0	1.4	chr4	8422115	8422394	(181792161)	+	HERV17-int	LTR/ERV1	830	1129	(3973)	2801731
756	28.9	2.6	4.7	chr4	8643582	8643706	(181570849)	+	MLT1A	LTR/ERVL-MaLR	48	173	(201)	2802077
30	3.5	0.0	0.0	chr4	8643707	8643736	(181570819)	+	(CT)n	Simple_repeat	1	30	(0)	2802078
756	28.9	2.6	4.7	chr4	8643737	8643929	(181570626)	+	MLT1A	LTR/ERVL-MaLR	174	359	(15)	2802077
31	3.3	0.0	0.0	chr4	8701022	8701052	(181513503)	+	(GT)n	Simple_repeat	1	31	(0)	2802174
23	18.9	0.0	0.0	chr4	8701053	8701100	(181513455)	+	GA-rich	Low_complexity	1	48	(0)	2802175
67	1.6	0.0	0.0	chr4	8917813	8917874	(181296681)	+	(GA)n	Simple_repeat	1	62	(0)	2802471
69	7.4	0.0	0.0	chr4	9135164	9135249	(181079306)	+	(TC)n	Simple_repeat	1	86	(0)	2802777
183	21.8	11.3	0.0	chr4	9931784	9931838	(180282717)	C	L2c	LINE/L2	(62)	3325	3264	2803925
59	0.0	0.0	0.0	chr4	9931914	9931963	(180282592)	+	(CT)n	Simple_repeat	1	50	(0)	2803926
97	15.9	0.0	0.0	chr4	11156051	11156219	(179058336)	+	GA-rich	Low_complexity	1	169	(0)	2805718
530	34.0	3.8	4.5	chr4	13511480	13511744	(176702811)	C	MLT1O	LTR/ERVL-MaLR	(179)	363	101	2809417
1910	12.4	3.3	4.6	chr4	13511835	13512140	(176702415)	C	AluSg4	SINE/Alu	(8)	302	1	2809418
23	24.0	0.0	0.0	chr4	14909551	14909600	(175304955)	+	(AC)n	Simple_repeat	1	50	(0)	2811781
47	2.3	0.0	0.0	chr4	14909698	14909742	(175304813)	+	(CT)n	Simple_repeat	1	45	(0)	2811782
36	0.0	0.0	0.0	chr4	15470650	15470689	(174743866)	+	(TC)n	Simple_repeat	1	40	(0)	2812720
53	0.0	0.0	0.0	chr4	15470690	15470734	(174743821)	+	(TA)n	Simple_repeat	1	45	(0)	2812721
29	8.1	0.0	0.0	chr4	15974069	15974107	(174240448)	+	(AC)n	Simple_repeat	1	39	(0)	2813572
37	2.9	0.0	0.0	chr4	15974108	15974143	(174240412)	+	(CT)n	Simple_repeat	1	36	(0)	2813573
7046	16.9	4.7	0.9	chr4	16092530	16094108	(174120447)	+	L1M1	LINE/L1	16	1765	(5800)	2813779
73	0.0	0.0	0.0	chr4	16094109	16094170	(174120385)	+	(GA)n	Simple_repeat	1	62	(0)	2813780
7046	16.3	8.5	0.2	chr4	16094171	16094814	(174119741)	+	L1M1	LINE/L1	1766	2465	(5100)	2813779
445	29.6	1.2	1.2	chr4	19823864	19824024	(170390531)	+	Eulor6B	DNA?	84	244	(94)	2820091
19	8.1	0.0	0.0	chr4	20354881	20354906	(169859649)	+	(GT)n	Simple_repeat	1	26	(0)	2820847
47	0.0	0.0	0.0	chr4	20354907	20354946	(169859609)	+	(GA)n	Simple_repeat	1	40	(0)	2820848
16	0.0	0.0	0.0	chr4	20441485	20441502	(169773053)	+	(TC)n	Simple_repeat	1	18	(0)	2820971
36	2.9	0.0	0.0	chr4	20441520	20441554	(169773001)	+	(TC)n	Simple_repeat	1	35	(0)	2820971
1582	18.8	0.0	8.0	chr4	20803358	20803682	(169410873)	+	AluJb	SINE/Alu	9	307	(5)	2821439
38	4.5	0.0	0.0	chr4	20803683	20803729	(169410826)	+	(GA)n	Simple_repeat	1	47	(0)	2821440
37	4.2	0.0	0.0	chr4	20803728	20803776	(169410779)	+	(AGGA)n	Simple_repeat	1	49	(0)	2821441
540	30.5	8.8	1.4	chr4	20803839	20804072	(169410483)	+	MIR	SINE/MIR	1	244	(18)	2821442
101	3.8	0.9	0.0	chr4	21304031	21304137	(168910418)	+	(GA)n	Simple_repeat	1	108	(0)	2822281
24	19.9	7.5	0.0	chr4	24576570	24576674	(165637881)	+	(TCTCGA)n	Simple_repeat	1	112	(0)	2827342
30	14.1	0.0	0.0	chr4	24874105	24874152	(165340403)	+	(AG)n	Simple_repeat	1	48	(0)	2827894
1712	22.2	12.7	7.9	chr4	24987027	24987355	(165227200)	+	MLT1E1	LTR/ERVL-MaLR	1	312	(342)	2828090
46	2.3	0.0	0.0	chr4	24987356	24987399	(165227156)	+	(TC)n	Simple_repeat	1	44	(0)	2828091
2019	16.6	1.3	5.2	chr4	24987410	24987815	(165226740)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2828092
51	3.9	0.0	0.0	chr4	25089215	25089267	(165125288)	+	(AG)n	Simple_repeat	1	53	(0)	2828277
195	33.3	0.0	0.0	chr4	25501247	25501303	(164713252)	C	L3b	LINE/CR1	(1)	5231	5175	2829042
2205	12.6	0.7	0.0	chr4	26109104	26109405	(164105150)	C	AluSz	SINE/Alu	(8)	304	1	2830387
53	2.0	0.0	0.0	chr4	26109412	26109461	(164105094)	+	(CT)n	Simple_repeat	1	50	(0)	2830388
53	3.9	0.0	0.0	chr4	26158930	26158983	(164055572)	+	(TC)n	Simple_repeat	1	54	(0)	2830495
60	4.8	0.0	0.0	chr4	26191211	26191275	(164023280)	+	(AG)n	Simple_repeat	1	65	(0)	2830554
32	5.2	0.0	0.0	chr4	26297358	26297397	(163917158)	+	(GA)n	Simple_repeat	1	40	(0)	2830802
731	27.8	5.4	0.9	chr4	26388347	26388557	(163825998)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	2830978
18	0.0	0.0	0.0	chr4	26388605	26388624	(163825931)	+	(CT)n	Simple_repeat	1	20	(0)	2830979
1449	22.4	12.6	1.5	chr4	26388625	26388940	(163825615)	+	L1ME1	LINE/L1	1710	2054	(5033)	2830976
15477	14.5	4.6	10.3	chr4	26445852	26447561	(163766994)	+	L1PB3	LINE/L1	3227	4919	(1943)	2831056
61	3.1	0.0	2.9	chr4	26447562	26447631	(163766924)	+	(TC)n	Simple_repeat	1	70	(0)	2831058
626	11.8	1.1	0.0	chr4	26447633	26447725	(163766830)	C	AluSx	SINE/Alu	(36)	276	183	2831059
332	29.3	9.1	8.2	chr4	26471325	26471618	(163742937)	C	LTR78B	LTR/ERV1	(2)	1294	998	2831108
41	0.0	0.0	0.0	chr4	26471621	26471655	(163742900)	+	(TC)n	Simple_repeat	1	35	(0)	2831109
193	37.0	6.0	5.2	chr4	26624141	26624371	(163590184)	+	L2c	LINE/L2	3023	3255	(132)	2831380
697	12.4	0.0	0.0	chr4	26624373	26624469	(163590086)	C	AluSx3	SINE/Alu	(8)	303	207	2831381
320	11.6	0.0	0.0	chr4	26624470	26624528	(163590027)	C	FLAM_C	SINE/Alu	(93)	40	1	2831382
285	7.4	4.7	3.9	chr4	27100528	27100654	(163113901)	+	HERV17-int	LTR/ERV1	706	833	(7793)	2832077
13	18.8	4.5	2.2	chr4	30719608	30719651	(159494904)	+	(CCTCCCT)n	Simple_repeat	1	46	(0)	2837090
44	21.5	6.1	0.0	chr4	30720221	30720242	(159494313)	+	GA-rich	Low_complexity	1	135	(0)	2837091
30	20.2	5.7	2.7	chr4	30720243	30720347	(159494208)	+	G-rich	Low_complexity	1	111	(0)	2837092
36	30.6	1.8	3.5	chr4	30721980	30722149	(159492406)	+	(CGG)n	Simple_repeat	1	173	(0)	2837094
216	35.1	2.3	4.5	chr4	30883179	30883312	(159331243)	C	MIRc	SINE/MIR	(93)	175	45	2837314
23	22.6	0.0	3.3	chr4	30917180	30917239	(159297316)	+	(CT)n	Simple_repeat	1	60	(0)	2837367
31	10.6	1.9	1.9	chr4	30969637	30969689	(159244866)	+	(AG)n	Simple_repeat	1	54	(0)	2837425
149	18.6	2.5	3.2	chr4	31056396	31056759	(159157796)	+	A-rich	Low_complexity	1	373	(0)	2837546
912	11.4	0.0	0.0	chr4	31056766	31056879	(159157676)	C	AluSx	SINE/Alu	(198)	114	1	2837547
444	30.9	8.7	5.5	chr4	31228031	31228410	(158986145)	+	MLT1J1	LTR/ERVL-MaLR	1	393	(51)	2837804
86	5.3	1.0	0.0	chr4	33555060	33555158	(156659397)	+	(CT)n	Simple_repeat	1	100	(0)	2840934
2044	5.9	9.0	0.0	chr4	35302428	35302681	(154911874)	+	AluY	SINE/Alu	1	279	(32)	2843263
62	0.0	0.0	0.0	chr4	35302689	35302741	(154911814)	+	(AG)n	Simple_repeat	1	53	(0)	2843264
16	16.6	4.9	0.0	chr4	38489530	38489570	(151724985)	+	(CCTCT)n	Simple_repeat	1	43	(0)	2847863
55	7.2	1.4	0.0	chr4	38489600	38489672	(151724883)	+	(TC)n	Simple_repeat	1	74	(0)	2847864
2134	16.4	3.9	2.4	chr4	38617277	38617636	(151596919)	+	MSTB1	LTR/ERVL-MaLR	1	366	(66)	2848099
44	7.5	0.0	0.0	chr4	38617637	38617692	(151596863)	+	(CT)n	Simple_repeat	1	56	(0)	2848100
12	25.3	3.8	1.8	chr4	38664311	38664363	(151550192)	+	(CGCC)n	Simple_repeat	1	55	(0)	2848198
2301	14.1	0.0	0.0	chr4	38858438	38858741	(151355814)	+	AluSx1	SINE/Alu	1	304	(8)	2848516
85	4.7	0.0	0.0	chr4	38858742	38858831	(151355724)	+	(AG)n	Simple_repeat	1	90	(0)	2848517
89	1.2	0.0	1.1	chr4	38858833	38858919	(151355636)	+	(AAGA)n	Simple_repeat	1	87	(0)	2848518
34	4.9	0.0	0.0	chr4	38984308	38984349	(151230206)	+	(TC)n	Simple_repeat	1	42	(0)	2848764
41	0.0	0.0	0.0	chr4	38984350	38984384	(151230171)	+	(TG)n	Simple_repeat	1	35	(0)	2848765
28	20.2	8.0	1.9	chr4	39182678	39182777	(151031778)	+	GA-rich	Low_complexity	1	108	(0)	2849140
5722	23.2	5.0	16.7	chr4	39211204	39211929	(151002626)	+	L1MEf	LINE/L1	4409	5043	(1501)	2849185
67	0.0	0.0	0.0	chr4	39211930	39211986	(151002569)	+	(AG)n	Simple_repeat	1	57	(0)	2849192
5722	23.2	5.0	16.7	chr4	39211987	39212508	(151002047)	+	L1MEf	LINE/L1	5044	5600	(944)	2849185
852	17.4	0.0	0.0	chr4	39403153	39403284	(150811271)	C	FLAM_C	SINE/Alu	(11)	132	1	2849555
235	29.4	9.8	3.2	chr4	39403299	39403393	(150811162)	C	L2b	LINE/L2	(2)	3373	3272	2849556
27	6.0	0.0	0.0	chr4	39403406	39403440	(150811115)	+	(AG)n	Simple_repeat	1	35	(0)	2849557
407	16.9	3.3	4.3	chr4	39697330	39697422	(150517133)	+	MER5A	DNA/hAT-Charlie	1	92	(97)	2850241
36	0.0	0.0	0.0	chr4	39697442	39697472	(150517083)	+	(GT)n	Simple_repeat	1	31	(0)	2850242
25	0.0	0.0	0.0	chr4	39697473	39697499	(150517056)	+	(GA)n	Simple_repeat	1	27	(0)	2850243
38	17.0	5.8	0.0	chr4	40193474	40193560	(150020995)	+	GA-rich	Low_complexity	1	92	(0)	2851462
43	9.9	0.0	0.0	chr4	40338828	40338892	(149875663)	+	(CTCT)n	Simple_repeat	1	65	(0)	2851784
16	0.0	0.0	0.0	chr4	40338892	40338909	(149875646)	+	(CA)n	Simple_repeat	1	18	(0)	2851785
2322	10.8	0.0	0.6	chr4	40338996	40339309	(149875246)	+	AluSx1	SINE/Alu	1	312	(0)	2851786
786	14.1	0.0	0.8	chr4	40990154	40990275	(149224280)	+	5S	rRNA	1	121	(0)	2853240
36	11.5	6.0	0.0	chr4	40990276	40990342	(149224213)	+	(CT)n	Simple_repeat	1	71	(0)	2853241
43	2.5	0.0	0.0	chr4	41390240	41390280	(148824275)	+	(GA)n	Simple_repeat	1	41	(0)	2853981
37	2.9	0.0	0.0	chr4	41454451	41454486	(148760069)	+	(GA)n	Simple_repeat	1	36	(0)	2854088
36	17.7	1.4	0.0	chr4	41546842	41546911	(148667644)	+	GA-rich	Low_complexity	1	71	(0)	2854248
1940	16.4	3.2	4.6	chr4	41547019	41547428	(148667127)	C	L1MA7	LINE/L1	(0)	6291	5888	2854249
35490	5.2	1.8	1.5	chr4	42315690	42320148	(147894407)	+	HERVIP10FH-int	LTR/ERV1	624	5097	(5)	2855463
70	0.0	0.0	0.0	chr4	46389803	46389862	(143824693)	+	(GA)n	Simple_repeat	1	60	(0)	2860783
336	33.5	11.6	2.8	chr4	47212999	47213320	(143001235)	+	L2a	LINE/L2	3050	3403	(23)	2861915
12	15.9	5.7	0.0	chr4	47213354	47213388	(143001167)	+	A-rich	Low_complexity	1	37	(0)	2861916
46	4.3	0.0	0.0	chr4	47213422	47213469	(143001086)	+	(CT)n	Simple_repeat	1	48	(0)	2861917
308	23.1	13.0	3.7	chr4	47213512	47213727	(143000828)	C	L1MC4	LINE/L1	(5221)	994	756	2861918
291	33.2	15.2	4.5	chr4	48375724	48376098	(141838457)	+	L2c	LINE/L2	2911	3332	(55)	2863760
2184	13.2	0.7	0.3	chr4	48376172	48376474	(141838081)	+	AluSz6	SINE/Alu	1	304	(8)	2863767
53	0.0	0.0	0.0	chr4	51834043	51834087	(138380468)	+	(TC)n	Simple_repeat	1	45	(0)	2865368
16	19.1	0.0	0.0	chr4	52062455	52062484	(138152071)	+	(TG)n	Simple_repeat	1	30	(0)	2865668
27	8.6	0.0	0.0	chr4	52062484	52062520	(138152035)	+	(GA)n	Simple_repeat	1	37	(0)	2865669
1807	17.1	1.1	1.4	chr4	52544650	52544936	(137669619)	+	AluJo	SINE/Alu	1	286	(26)	2866315
47	8.6	2.7	0.0	chr4	52545037	52545110	(137669445)	+	(CT)n	Simple_repeat	1	76	(0)	2866316
894	14.8	7.4	2.8	chr4	52545114	52545255	(137669300)	C	AluJr	SINE/Alu	(27)	285	137	2866317
607	16.3	1.1	0.0	chr4	52776338	52776423	(137438132)	+	FLAM_A	SINE/Alu	29	115	(27)	2866739
54	14.8	1.1	0.0	chr4	52776424	52776515	(137438040)	+	GA-rich	Low_complexity	1	93	(0)	2866740
182	21.2	0.0	0.0	chr4	52868375	52868407	(137346148)	C	MIR3	SINE/MIR	(90)	118	86	2866901
30	18.9	1.7	0.0	chr4	52868413	52868472	(137346083)	+	GA-rich	Low_complexity	1	61	(0)	2866902
1955	15.5	0.7	0.0	chr4	53006999	53007275	(137207280)	+	AluJr4	SINE/Alu	1	279	(33)	2867110
66	8.1	2.1	0.0	chr4	53007277	53007370	(137207185)	+	(GA)n	Simple_repeat	1	96	(0)	2867111
26	16.0	0.0	1.9	chr4	53007351	53007403	(137207152)	+	GA-rich	Low_complexity	1	53	(0)	2867112
37	2.9	0.0	0.0	chr4	53012342	53012377	(137202178)	+	(TC)n	Simple_repeat	1	36	(0)	2867120
19	0.0	0.0	0.0	chr4	53012378	53012398	(137202157)	+	(AC)n	Simple_repeat	1	21	(0)	2867121
355	30.1	0.4	2.3	chr4	53186834	53186962	(137027593)	+	MIRb	SINE/MIR	120	252	(10)	2867360
23	0.0	0.0	0.0	chr4	53417739	53417763	(136796792)	+	(AC)n	Simple_repeat	1	25	(0)	2867663
67	0.0	0.0	0.0	chr4	53417764	53417820	(136796735)	+	(CT)n	Simple_repeat	1	57	(0)	2867664
626	29.6	20.2	5.4	chr4	53492086	53492506	(136722049)	C	L2a	LINE/L2	(76)	3350	2831	2867761
43	0.0	0.0	0.0	chr4	53492507	53492543	(136722012)	+	(GA)n	Simple_repeat	1	37	(0)	2867763
626	28.4	19.8	6.0	chr4	53492544	53492954	(136721601)	C	L2a	LINE/L2	(589)	2830	2324	2867761
32	20.9	0.0	2.7	chr4	53703226	53703300	(136511255)	+	(CT)n	Simple_repeat	1	75	(0)	2868093
39	9.7	0.0	0.0	chr4	53830767	53830821	(136383734)	+	(AG)n	Simple_repeat	1	55	(0)	2868298
48	17.5	0.0	3.8	chr4	53850277	53850402	(136364153)	+	GA-rich	Low_complexity	1	121	(0)	2868314
54	10.0	3.5	0.0	chr4	54107379	54107464	(136107091)	+	(AG)n	Simple_repeat	1	89	(0)	2868735
195	31.2	7.1	6.5	chr4	54216819	54216876	(135997679)	+	L2a	LINE/L2	3026	3080	(307)	2868974
2315	11.6	0.0	0.0	chr4	54216877	54217187	(135997368)	C	AluSz6	SINE/Alu	(1)	311	1	2868975
18	11.7	0.0	0.0	chr4	54512404	54512431	(135702124)	+	(AC)n	Simple_repeat	1	28	(0)	2869431
44	4.4	0.0	0.0	chr4	54512432	54512478	(135702077)	+	(AG)n	Simple_repeat	1	47	(0)	2869432
473	32.5	3.2	2.4	chr4	54571525	54571770	(135642785)	+	Plat_L3	LINE/CR1	3019	3266	(320)	2869543
107	18.5	2.4	2.3	chr4	56042330	56042539	(134172016)	+	(CCTT)n	Simple_repeat	1	209	(0)	2871908
29	0.0	0.0	0.0	chr4	56042540	56042564	(134171991)	+	(TC)n	Simple_repeat	1	25	(0)	2871909
107	18.5	2.4	2.3	chr4	56042565	56042606	(134171949)	+	(CCTT)n	Simple_repeat	1	42	(0)	2871910
1913	14.2	3.4	1.0	chr4	56042614	56042902	(134171653)	C	AluJo	SINE/Alu	(16)	296	1	2871911
32	22.2	4.7	0.0	chr4	56139306	56139390	(134075165)	+	(TC)n	Simple_repeat	1	89	(0)	2872098
60	4.8	0.0	0.0	chr4	56188623	56188687	(134025868)	+	(CT)n	Simple_repeat	1	65	(0)	2872200
23	0.0	0.0	0.0	chr4	56188688	56188712	(134025843)	+	(AC)n	Simple_repeat	1	25	(0)	2872201
22	0.0	0.0	0.0	chr4	56188712	56188735	(134025820)	+	(AG)n	Simple_repeat	1	24	(0)	2872202
32	0.0	0.0	0.0	chr4	56543931	56543950	(133670605)	+	(AG)n	Simple_repeat	2	21	(0)	2872797
19	4.3	0.0	0.0	chr4	56543950	56543973	(133670582)	+	(GT)n	Simple_repeat	1	24	(0)	2872798
40	0.0	0.0	0.0	chr4	56543974	56544007	(133670548)	+	(GA)n	Simple_repeat	1	34	(0)	2872799
2103	9.6	0.0	1.1	chr4	56544009	56544288	(133670267)	C	AluSz	SINE/Alu	(35)	277	1	2872800
197	32.5	1.7	7.9	chr4	57073837	57073963	(133140592)	C	MIRc	SINE/MIR	(67)	201	83	2873916
34	0.0	0.0	0.0	chr4	57074040	57074068	(133140487)	+	(TC)n	Simple_repeat	1	29	(0)	2873917
2239	10.3	0.0	0.0	chr4	57074069	57074360	(133140195)	C	AluSz6	SINE/Alu	(20)	292	1	2873918
540	31.6	7.4	5.8	chr4	57800464	57800689	(132413866)	+	L1ME3C	LINE/L1	4725	4944	(1202)	2874965
54	2.0	0.0	0.0	chr4	57800690	57800740	(132413815)	+	(AG)n	Simple_repeat	1	51	(0)	2874966
1734	16.5	4.8	0.4	chr4	57800741	57801000	(132413555)	C	AluJb	SINE/Alu	(34)	278	7	2874967
49	25.2	3.5	0.0	chr4	61199939	61200082	(129014473)	+	GA-rich	Low_complexity	1	149	(0)	2879115
360	29.4	1.9	1.9	chr4	61346119	61346226	(128868329)	+	FRAM	SINE/Alu	1	108	(194)	2879289
32	11.2	1.7	0.0	chr4	61346241	61346298	(128868257)	+	(TC)n	Simple_repeat	1	59	(0)	2879290
41	0.0	0.0	0.0	chr4	61346309	61346343	(128868212)	+	(AC)n	Simple_repeat	1	35	(0)	2879291
32	0.0	0.0	0.0	chr4	61856420	61856449	(128358106)	+	(TTCC)n	Simple_repeat	1	30	(0)	2879985
30	0.0	0.0	0.0	chr4	61856450	61856478	(128358077)	+	(TTTTC)n	Simple_repeat	1	29	(0)	2879986
76	28.4	1.2	2.7	chr4	61856494	61856544	(128358011)	+	(CCTT)n	Simple_repeat	1	49	(0)	2879987
46	6.9	1.6	0.0	chr4	61856545	61856605	(128357950)	+	(CT)n	Simple_repeat	1	62	(0)	2879988
2013	12.2	5.5	0.3	chr4	61856606	61856899	(128357656)	C	AluSx	SINE/Alu	(2)	310	1	2879989
2291	8.6	1.0	6.2	chr4	61869637	61869960	(128344595)	+	AluSp	SINE/Alu	1	307	(6)	2880015
49	4.1	0.0	0.0	chr4	61869961	61870011	(128344544)	+	(AG)n	Simple_repeat	1	51	(0)	2880016
25	6.8	6.1	1.9	chr4	61870012	61870060	(128344495)	+	(AAAG)n	Simple_repeat	1	52	(0)	2880017
4276	16.4	3.3	1.7	chr4	61870196	61870996	(128343559)	+	L1MB8	LINE/L1	4879	5685	(493)	2880018
20162	15.0	3.1	2.0	chr4	62301491	62303067	(127911488)	+	L1MA3	LINE/L1	174	1751	(5814)	2880622
54	3.7	0.0	0.0	chr4	62303068	62303122	(127911433)	+	(AG)n	Simple_repeat	1	55	(0)	2880623
20162	14.8	3.0	2.0	chr4	62303123	62305062	(127909493)	+	L1MA3	LINE/L1	1752	3734	(3831)	2880622
463	28.6	9.7	0.7	chr4	62754401	62754669	(127459886)	+	MLT1H1	LTR/ERVL-MaLR	1	355	(240)	2881187
57	0.0	0.0	0.0	chr4	62754670	62754718	(127459837)	+	(AG)n	Simple_repeat	1	49	(0)	2881188
396	27.5	6.5	0.6	chr4	62754719	62754915	(127459640)	+	MLT1H1	LTR/ERVL-MaLR	356	541	(54)	2881187
56	0.0	0.0	0.0	chr4	67491481	67491528	(122723027)	+	(AG)n	Simple_repeat	1	48	(0)	2887012
306	28.8	7.7	17.3	chr4	67491529	67491713	(122722842)	C	MamRep38	DNA/hAT	(71)	224	35	2887011
40	12.5	0.0	0.0	chr4	70631371	70631440	(119583115)	+	(TC)n	Simple_repeat	1	70	(0)	2890874
1258	11.0	0.0	0.0	chr4	70732920	70733074	(119481481)	+	AluSg4	SINE/Alu	134	288	(22)	2891073
76	8.3	0.9	0.0	chr4	70733075	70733179	(119481376)	+	(GA)n	Simple_repeat	1	106	(0)	2891074
15577	14.8	2.0	1.7	chr4	71308428	71314945	(118899610)	+	L1PA8	LINE/L1	6	6487	(0)	2892064
410	25.2	4.5	3.6	chr4	71466790	71466931	(118747624)	+	LTR33	LTR/ERVL	20	157	(358)	2892248
51	2.1	0.0	0.0	chr4	71466932	71466979	(118747576)	+	(AG)n	Simple_repeat	1	48	(0)	2892249
323	30.4	21.2	2.7	chr4	71466980	71467196	(118747359)	+	LTR33	LTR/ERVL	152	412	(119)	2892248
40	16.4	1.3	0.0	chr4	71493634	71493710	(118720845)	+	(TCTC)n	Simple_repeat	1	78	(0)	2892290
36	8.9	0.0	0.0	chr4	72272973	72273021	(117941534)	+	(TC)n	Simple_repeat	1	49	(0)	2893298
1913	16.1	0.4	0.0	chr4	72273033	72273311	(117941244)	C	AluSz6	SINE/Alu	(32)	280	1	2893299
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
20241	15.5	4.3	0.9	chr4	73169504	73171178	(117043377)	+	L1MA2	LINE/L1	13	1761	(5804)	2894520
51	0.0	0.0	0.0	chr4	73171179	73171222	(117043333)	+	(GA)n	Simple_repeat	1	44	(0)	2894521
20241	14.8	4.2	0.8	chr4	73171223	73173422	(117041133)	+	L1MA2	LINE/L1	1762	4032	(3533)	2894520
3374	16.6	3.6	4.6	chr4	73205325	73206397	(117008158)	+	L1MA8	LINE/L1	4749	5801	(490)	2894579
46	20.9	0.0	0.0	chr4	73206398	73206493	(117008062)	+	GA-rich	Low_complexity	1	96	(0)	2894581
2605	12.7	1.7	6.1	chr4	73206495	73206826	(117007729)	+	L1MA8	LINE/L1	5819	6135	(156)	2894579
13	25.8	0.0	0.0	chr4	74038534	74038570	(116175985)	+	(CAG)n	Simple_repeat	1	37	(0)	2895644
3218	11.6	2.0	2.2	chr4	74201989	74202481	(116012074)	C	LTR22B	LTR/ERVK	(0)	492	1	2895850
18	5.6	5.0	2.4	chr4	74202482	74202514	(116012041)	+	(GAAATG)n	Simple_repeat	6	40	(0)	2895851
42	0.0	0.0	0.0	chr4	75123700	75123735	(115090820)	+	(TC)n	Simple_repeat	1	36	(0)	2897120
768	12.3	0.9	0.0	chr4	76611053	76611166	(113603389)	C	L1MB3	LINE/L1	(7)	6176	6062	2899558
23	7.0	0.0	0.0	chr4	76611242	76611271	(113603284)	+	(CT)n	Simple_repeat	1	30	(0)	2899559
2200	10.1	0.0	1.8	chr4	76656892	76657168	(113557387)	+	AluSq2	SINE/Alu	3	274	(39)	2899624
37	2.8	0.0	0.0	chr4	76657169	76657204	(113557351)	+	(CT)n	Simple_repeat	1	36	(0)	2899625
11	17.6	0.0	2.9	chr4	76657205	76657228	(113557327)	+	(ACATAT)n	Simple_repeat	4	27	(0)	2899626
1564	20.2	5.5	6.8	chr4	77091060	77091115	(113123440)	C	MLT2D	LTR/ERVL	(7)	407	359	2900343
62	3.3	0.0	0.0	chr4	77091116	77091177	(113123378)	+	(GA)n	Simple_repeat	1	62	(0)	2900344
1564	20.2	5.5	6.8	chr4	77091178	77091530	(113123025)	C	MLT2D	LTR/ERVL	(56)	358	5	2900343
377	27.4	3.1	1.6	chr4	77777020	77777145	(112437410)	+	MLT1L	LTR/ERVL-MaLR	475	602	(8)	2901140
115	17.4	3.0	2.9	chr4	78043704	78043974	(112170581)	+	(TTTC)n	Simple_repeat	1	279	(0)	2901613
1967	13.8	0.0	0.7	chr4	78043981	78044249	(112170306)	C	AluSz	SINE/Alu	(37)	275	9	2901614
79	0.0	0.0	0.0	chr4	78629320	78629386	(111585169)	+	(AG)n	Simple_repeat	1	67	(0)	2902441
2796	15.5	8.5	6.3	chr4	78629387	78629868	(111584687)	C	LTR9	LTR/ERV1	(119)	493	1	2902440
198	28.0	7.8	4.8	chr4	79053834	79053957	(111160598)	+	L2a	LINE/L2	2190	2317	(1102)	2903140
587	36.8	2.9	5.9	chr4	79053971	79054001	(111160554)	+	L2a	LINE/L2	2736	2761	(658)	2903140
42	4.6	0.0	0.0	chr4	79054002	79054046	(111160509)	+	(CT)n	Simple_repeat	1	45	(0)	2903141
352	22.4	3.5	2.1	chr4	79352448	79353482	(110861073)	+	(AGAC)n	Simple_repeat	1	1071	(0)	2903505
254	14.1	5.2	2.3	chr4	79353483	79353613	(110860942)	+	HERV17-int	LTR/ERV1	713	847	(7779)	2903506
55	4.1	1.2	3.7	chr4	79400647	79400727	(110813828)	+	(AG)n	Simple_repeat	1	82	(0)	2903582
41	2.6	0.0	0.0	chr4	79931450	79931489	(110283066)	+	(TC)n	Simple_repeat	1	40	(0)	2904188
23	21.0	1.5	3.0	chr4	80186362	80186427	(110028128)	+	GA-rich	Low_complexity	1	67	(0)	2904506
30	0.0	0.0	0.0	chr4	80186431	80186456	(110028099)	+	(GA)n	Simple_repeat	1	26	(0)	2904507
24	0.0	0.0	3.3	chr4	80195903	80195928	(110018627)	+	(AC)n	Simple_repeat	1	26	(0)	2904515
36	0.0	0.0	0.0	chr4	80195929	80195959	(110018596)	+	(AG)n	Simple_repeat	1	31	(0)	2904516
55	9.4	0.0	1.2	chr4	81220249	81220331	(108994224)	+	(TC)n	Simple_repeat	1	83	(0)	2905819
1491	12.1	8.7	21.8	chr4	81367997	81368441	(108846114)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2906024
54	0.0	0.0	0.0	chr4	81789130	81789175	(108425380)	+	(GT)n	Simple_repeat	1	46	(0)	2906669
30	3.5	0.0	0.0	chr4	81789178	81789207	(108425348)	+	(AG)n	Simple_repeat	1	30	(0)	2906670
1503	22.0	1.4	0.8	chr4	81789209	81789561	(108424994)	C	MLT2D	LTR/ERVL	(55)	359	5	2906671
271	26.2	4.5	6.0	chr4	82394604	82394661	(107819894)	+	SVA_F	Retroposon/SVA	2	111	(1264)	2907536
365	24.2	0.0	0.0	chr4	82394662	82394727	(107819828)	C	AluJb	SINE/Alu	(30)	282	217	2907537
1278	25.8	9.7	7.0	chr4	82394740	82395329	(107819226)	C	MER21C	LTR/ERVL	(234)	704	6	2907538
28228	8.3	1.9	2.6	chr4	82474680	82478317	(107736238)	+	HERV17-int	LTR/ERV1	344	3946	(4680)	2907681
290	33.1	6.7	8.5	chr4	82529584	82530032	(107684523)	C	L2c	LINE/L2	(1299)	2120	1650	2907765
22	10.0	0.0	0.0	chr4	82530074	82530105	(107684450)	+	(CT)n	Simple_repeat	1	32	(0)	2907770
25	24.7	5.9	0.9	chr4	82530106	82530207	(107684348)	+	GA-rich	Low_complexity	1	108	(0)	2907771
2576	6.8	0.0	0.0	chr4	82530276	82530582	(107683973)	+	AluYm1	SINE/Alu	1	307	(4)	2907772
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
13	9.4	5.3	5.0	chr4	83485208	83485245	(106729310)	+	G-rich	Low_complexity	1	40	(0)	2909614
65	8.4	0.0	0.0	chr4	83795050	83795137	(106419418)	+	(AG)n	Simple_repeat	1	88	(0)	2910217
41	0.0	4.3	2.0	chr4	84479791	84479837	(105734718)	+	(CT)n	Simple_repeat	1	49	(0)	2911159
13	12.2	7.9	2.4	chr4	84583041	84583078	(105631477)	+	(TCC)n	Simple_repeat	1	41	(0)	2911314
420	31.6	7.6	10.3	chr4	84695359	84695448	(105519107)	+	L2	LINE/L2	2675	2764	(655)	2911472
35	0.0	0.0	0.0	chr4	84695449	84695478	(105519077)	+	(GT)n	Simple_repeat	1	30	(0)	2911473
420	31.6	7.6	10.3	chr4	84695479	84695493	(105519062)	+	L2	LINE/L2	2765	2765	(654)	2911472
60	3.4	0.0	0.0	chr4	84695494	84695553	(105519002)	+	(AG)n	Simple_repeat	1	60	(0)	2911474
420	31.6	7.6	10.3	chr4	84695554	84695718	(105518837)	+	L2	LINE/L2	2765	2938	(481)	2911472
39	8.5	1.6	1.5	chr4	85177855	85177918	(105036637)	+	(CT)n	Simple_repeat	1	65	(0)	2912203
46	2.3	0.0	0.0	chr4	85372440	85372483	(104842072)	+	(TC)n	Simple_repeat	1	44	(0)	2912412
41	6.5	0.0	0.0	chr4	86400417	86400465	(103814090)	+	(CT)n	Simple_repeat	1	49	(0)	2913789
45	15.1	1.2	0.0	chr4	86551497	86551578	(103662977)	+	(TTCC)n	Simple_repeat	1	83	(0)	2914006
2233	12.6	0.3	0.0	chr4	86551579	86551904	(103662651)	C	AluSz	SINE/Alu	(0)	312	1	2914007
11	20.1	1.9	7.4	chr4	86582786	86582838	(103631717)	+	(TATAATT)n	Simple_repeat	1	54	(0)	2914055
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
604	16.1	6.3	0.8	chr4	86666263	86666381	(103548174)	C	LTR9	LTR/ERV1	(0)	645	520	2914185
38	0.0	2.6	0.0	chr4	86666388	86666426	(103548129)	+	(CTCTCTCTT)n	Simple_repeat	1	40	(0)	2914186
40	25.8	4.5	8.0	chr4	87069357	87069666	(103144889)	+	(TTCC)n	Simple_repeat	1	324	(0)	2914867
47	2.3	0.0	0.0	chr4	88070602	88070646	(102143909)	+	(AG)n	Simple_repeat	1	45	(0)	2916488
1849	17.2	0.3	1.1	chr4	88070651	88070934	(102143621)	C	AluJr4	SINE/Alu	(30)	282	1	2916489
1430	16.7	0.9	0.0	chr4	88280483	88280703	(101933852)	+	AluJr	SINE/Alu	1	223	(89)	2916875
392	4.4	0.0	0.0	chr4	88280704	88280748	(101933807)	+	AluJb	SINE/Alu	89	133	(179)	2916876
619	20.8	0.0	3.3	chr4	88280749	88280868	(101933687)	+	AluSg7	SINE/Alu	181	296	(13)	2916877
16	23.3	2.2	0.0	chr4	89307845	89307889	(100906666)	+	(GCC)n	Simple_repeat	1	46	(0)	2918454
19	14.8	0.0	2.5	chr4	89308014	89308053	(100906502)	+	(GGC)n	Simple_repeat	1	40	(0)	2918455
70	1.2	5.6	1.1	chr4	89356532	89356620	(100857935)	+	(TTTC)n	Simple_repeat	1	94	(0)	2918538
60	23.3	2.0	0.7	chr4	89356621	89356770	(100857785)	+	(CTCT)n	Simple_repeat	1	153	(0)	2918539
579	31.7	12.1	5.5	chr4	89356771	89357187	(100857368)	C	HAL1ME	LINE/L1	(1135)	1330	883	2918540
16	0.0	0.0	0.0	chr4	89725319	89725335	(100489220)	+	(A)n	Simple_repeat	1	17	(0)	2919030
25	9.2	0.0	0.0	chr4	89725335	89725369	(100489186)	+	(AG)n	Simple_repeat	1	35	(0)	2919031
296	24.6	11.2	8.8	chr4	89725395	89725541	(100489014)	+	MER103C	DNA/hAT-Charlie	93	243	(54)	2919032
18	21.9	1.6	6.5	chr4	89845949	89846021	(100368534)	+	(AT)n	Simple_repeat	1	85	(18)	2919207
20	0.0	0.0	0.0	chr4	89846022	89846043	(100368512)	+	(GT)n	Simple_repeat	1	22	(0)	2919208
18	21.9	1.6	6.5	chr4	89846044	89846057	(100368498)	+	(AT)n	Simple_repeat	86	103	(0)	2919207
45	2.4	0.0	0.0	chr4	89846058	89846100	(100368455)	+	(AG)n	Simple_repeat	1	43	(0)	2919209
2254	14.7	14.5	0.0	chr4	89847364	89847799	(100366756)	C	LTR54	LTR/ERV1	(0)	510	1	2919210
38	0.0	0.0	0.0	chr4	89864825	89864857	(100349698)	+	(GA)n	Simple_repeat	1	33	(0)	2919232
1015	29.0	5.7	4.6	chr4	89864971	89865385	(100349170)	+	MLT1J	LTR/ERVL-MaLR	85	504	(8)	2919233
23	6.5	3.0	0.0	chr4	90128821	90128853	(100085702)	+	(CT)n	Simple_repeat	1	34	(0)	2919581
1493	24.8	6.0	6.2	chr4	91064258	91064808	(99149747)	C	MER68B	LTR/ERVL	(2)	562	13	2920753
589	30.9	8.6	0.9	chr4	94448102	94448317	(95766238)	+	MamSINE1	SINE/tRNA-RTE	38	271	(19)	2925014
946	19.1	1.1	0.0	chr4	94894255	94894432	(95320123)	C	UCON8	DNA	(215)	900	721	2925719
24	6.8	0.0	0.0	chr4	94894439	94894469	(95320086)	+	(AG)n	Simple_repeat	1	31	(0)	2925720
345	28.8	6.2	9.6	chr4	94902160	94902249	(95312306)	+	L1ME3Cz	LINE/L1	547	613	(384)	2925729
53	0.0	0.0	0.0	chr4	94902250	94902294	(95312261)	+	(AG)n	Simple_repeat	1	45	(0)	2925731
345	28.8	6.2	9.6	chr4	94902295	94902587	(95311968)	+	L1ME3Cz	LINE/L1	614	916	(81)	2925729
1327	12.7	2.6	0.5	chr4	95120377	95120597	(95093958)	+	L1P4	LINE/L1	4100	4325	(1821)	2926030
57	0.0	0.0	1.8	chr4	95120611	95120666	(95093889)	+	(TTCC)n	Simple_repeat	1	56	(0)	2926031
59	20.4	3.5	0.7	chr4	95120668	95120810	(95093745)	+	(TCTC)n	Simple_repeat	1	148	(0)	2926032
23	30.9	1.8	7.2	chr4	95120811	95120821	(95093734)	+	(CCTT)n	Simple_repeat	5	150	(0)	2926033
31	5.3	0.0	0.0	chr4	95448189	95448227	(94766328)	+	(TG)n	Simple_repeat	1	39	(0)	2926443
42	0.0	0.0	0.0	chr4	95448228	95448263	(94766292)	+	(GA)n	Simple_repeat	1	36	(0)	2926444
75	24.3	1.1	1.1	chr4	98177140	98177328	(92037227)	+	(TC)n	Simple_repeat	1	191	(0)	2929767
519	26.6	5.8	2.6	chr4	98207183	98207414	(92007141)	+	L1MC	LINE/L1	5353	5592	(532)	2929822
43	2.5	0.0	0.0	chr4	98207415	98207455	(92007100)	+	(TC)n	Simple_repeat	1	41	(0)	2929826
21	0.0	6.5	0.0	chr4	98207456	98207486	(92007069)	+	(ATCT)n	Simple_repeat	1	33	(0)	2929827
1761	17.3	1.7	0.7	chr4	98207488	98207782	(92006773)	C	AluJb	SINE/Alu	(14)	298	1	2929828
21	0.0	0.0	0.0	chr4	101085836	101085858	(89128697)	+	(AC)n	Simple_repeat	1	23	(0)	2933881
27	6.0	0.0	0.0	chr4	101085858	101085892	(89128663)	+	(AG)n	Simple_repeat	1	35	(0)	2933882
1580	15.0	10.8	2.0	chr4	101415277	101415453	(88799102)	+	THE1D	LTR/ERVL-MaLR	1	211	(170)	2934336
31	0.0	0.0	0.0	chr4	101415454	101415480	(88799075)	+	(CT)n	Simple_repeat	1	27	(0)	2934337
1580	15.0	10.8	2.0	chr4	101415481	101415649	(88798906)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	2934336
47	0.0	0.0	0.0	chr4	101439643	101439682	(88774873)	+	(GA)n	Simple_repeat	1	40	(0)	2934378
17	10.4	6.5	0.0	chr4	101439696	101439726	(88774829)	+	(CT)n	Simple_repeat	1	33	(0)	2934379
92	9.3	1.3	1.3	chr4	102057217	102057369	(88157186)	+	(TC)n	Simple_repeat	1	155	(0)	2935155
1595	13.9	11.0	0.0	chr4	102057370	102057628	(88156927)	C	AluJb	SINE/Alu	(19)	293	3	2935156
1795	18.5	0.3	1.6	chr4	102357326	102357663	(87856892)	+	AluJr	SINE/Alu	1	312	(0)	2935567
30	0.0	0.0	0.0	chr4	102357664	102357691	(87856864)	+	(AGGG)n	Simple_repeat	1	28	(0)	2935568
65	22.2	3.5	1.1	chr4	102357692	102357834	(87856721)	+	A-rich	Low_complexity	31	177	(0)	2935569
58	0.0	0.0	0.0	chr4	102357835	102357886	(87856669)	+	(GGAA)n	Simple_repeat	1	52	(0)	2935570
665	28.6	10.9	5.9	chr4	102357892	102358215	(87856340)	+	L2	LINE/L2	1496	1856	(1563)	2935571
1867	17.6	4.2	9.9	chr4	102404577	102405012	(87809543)	C	MLT2D	LTR/ERVL	(4)	410	1	2935626
18	17.0	0.0	0.0	chr4	102501328	102501360	(87713195)	+	GA-rich	Low_complexity	1	33	(0)	2935760
18	8.5	0.0	0.0	chr4	102502333	102502357	(87712198)	+	(CT)n	Simple_repeat	1	25	(0)	2935762
43	0.0	0.0	0.0	chr4	102502391	102502427	(87712128)	+	(CA)n	Simple_repeat	1	37	(0)	2935763
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
57	0.0	0.0	0.0	chr4	105163807	105163855	(85050700)	+	(GA)n	Simple_repeat	1	49	(0)	2939114
29	0.0	0.0	0.0	chr4	105163856	105163887	(85050668)	+	(TG)n	Simple_repeat	1	32	(0)	2939115
2018	12.4	6.7	5.3	chr4	105163888	105164286	(85050269)	C	L1MA9	LINE/L1	(3)	6309	5905	2939116
51	2.1	0.0	0.0	chr4	105224685	105224732	(84989823)	+	(TC)n	Simple_repeat	1	48	(0)	2939196
56	3.6	0.0	0.0	chr4	105648815	105648871	(84565684)	+	(TC)n	Simple_repeat	1	57	(0)	2939788
95	2.3	0.0	0.0	chr4	105898291	105898380	(84316175)	+	(TC)n	Simple_repeat	1	90	(0)	2940143
62	0.0	4.8	0.0	chr4	106589336	106589398	(83625157)	+	(GA)n	Simple_repeat	1	66	(0)	2941011
1938	13.6	12.2	3.9	chr4	106876430	106876615	(83337940)	+	MSTA	LTR/ERVL-MaLR	1	205	(223)	2941357
50	0.0	0.0	0.0	chr4	106876616	106876658	(83337897)	+	(CT)n	Simple_repeat	1	43	(0)	2941358
1938	13.6	12.2	3.9	chr4	106876659	106876861	(83337694)	+	MSTA	LTR/ERVL-MaLR	206	427	(1)	2941357
14	0.0	0.0	4.5	chr4	107500874	107500891	(82713664)	+	(TGTC)n	Simple_repeat	1	18	(0)	2942155
47	4.2	0.0	0.0	chr4	107500892	107500940	(82713615)	+	(TC)n	Simple_repeat	1	49	(0)	2942156
564	26.7	20.2	1.4	chr4	107701626	107701902	(82512653)	C	L2a	LINE/L2	(1)	3425	3084	2942404
17	4.9	0.0	0.0	chr4	108064635	108064655	(82149900)	+	(TC)n	Simple_repeat	1	21	(0)	2942886
44	0.0	0.0	0.0	chr4	108064656	108064693	(82149862)	+	(CA)n	Simple_repeat	1	38	(0)	2942887
456	19.6	2.9	2.9	chr4	108248123	108248227	(81966328)	+	MER124	DNA?	272	376	(21)	2943170
59	0.0	0.0	0.0	chr4	108690055	108690104	(81524451)	+	(TC)n	Simple_repeat	1	50	(0)	2943893
221	27.7	4.3	5.9	chr4	108690149	108690267	(81524288)	+	L2c	LINE/L2	3262	3378	(9)	2943894
38	5.0	0.0	0.0	chr4	108831675	108831716	(81382839)	+	(AG)n	Simple_repeat	1	42	(0)	2944146
1816	17.6	0.7	0.7	chr4	109104103	109104398	(81110157)	+	AluJr4	SINE/Alu	13	308	(4)	2944479
2732	24.9	8.1	8.3	chr4	109104399	109105183	(81109372)	+	L1MC5	LINE/L1	8526	9293	(11)	2944478
11	16.4	5.9	0.0	chr4	109560059	109560092	(80654463)	+	(GCTCTC)n	Simple_repeat	1	36	(0)	2945187
16	0.0	0.0	0.0	chr4	109560093	109560110	(80654445)	+	(T)n	Simple_repeat	1	18	(0)	2945188
32	0.0	0.0	0.0	chr4	109618953	109618987	(80595568)	+	(TC)n	Simple_repeat	1	35	(0)	2945262
83	4.6	0.0	0.0	chr4	109618988	109619078	(80595477)	+	(CTAC)n	Simple_repeat	1	91	(0)	2945263
2067	11.3	0.3	4.3	chr4	109619079	109619378	(80595177)	C	AluSx1	SINE/Alu	(24)	288	1	2945264
32	20.3	1.5	8.9	chr4	109818423	109818555	(80396000)	+	(TCCT)n	Simple_repeat	1	135	(0)	2945577
2266	12.9	0.7	0.0	chr4	109818556	109818864	(80395691)	C	AluSz6	SINE/Alu	(1)	311	1	2945578
91	4.9	0.0	1.8	chr4	109919282	109919390	(80295165)	+	(TC)n	Simple_repeat	1	109	(0)	2945705
231	25.4	4.8	0.0	chr4	110347162	110347220	(79867335)	+	LTR67B	LTR/ERVL	428	489	(131)	2946468
39	2.7	0.0	0.0	chr4	110347278	110347315	(79867240)	+	(TC)n	Simple_repeat	1	38	(0)	2946469
25	6.5	0.0	0.0	chr4	110347316	110347348	(79867207)	+	(AC)n	Simple_repeat	1	33	(0)	2946470
430	29.1	4.6	0.4	chr4	110412311	110412541	(79802014)	C	L1MEh	LINE/L1	(1235)	1000	760	2946569
1544	21.1	3.5	4.0	chr4	110515698	110516073	(79698482)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2946740
27	19.9	3.5	3.4	chr4	110636976	110637061	(79577494)	+	(TCTC)n	Simple_repeat	1	89	(0)	2946880
1298	18.5	12.1	0.3	chr4	111476838	111477051	(78737504)	C	MER44A	DNA/TcMar-Tigger	(0)	339	102	2947875
37	12.4	0.0	0.0	chr4	111477052	111477114	(78737441)	+	(CT)n	Simple_repeat	1	63	(0)	2947876
1298	18.5	12.1	0.3	chr4	111477115	111477197	(78737358)	C	MER44A	DNA/TcMar-Tigger	(238)	101	2	2947875
240	28.8	8.1	5.9	chr4	111477237	111477731	(78736824)	C	L1M6	LINE/L1	(4180)	2316	1810	2947877
426	33.9	7.4	3.9	chr4	111718586	111718766	(78495789)	C	MIRb	SINE/MIR	(46)	222	35	2948162
27	0.0	3.5	0.0	chr4	111718808	111718836	(78495719)	+	(GAGG)n	Simple_repeat	1	30	(0)	2948163
23	0.0	3.6	0.0	chr4	111718839	111718866	(78495689)	+	(AG)n	Simple_repeat	1	29	(0)	2948164
46	0.0	0.0	0.0	chr4	111777547	111777585	(78436970)	+	(CT)n	Simple_repeat	1	39	(0)	2948233
710	28.9	13.2	2.6	chr4	112001118	112001469	(78213086)	+	MLT1I	LTR/ERVL-MaLR	1	395	(16)	2948538
41	0.0	0.0	0.0	chr4	112001520	112001554	(78213001)	+	(TC)n	Simple_repeat	1	35	(0)	2948539
44	8.1	3.0	0.0	chr4	112144772	112144838	(78069717)	+	(TC)n	Simple_repeat	1	69	(0)	2948771
1556	12.4	6.0	0.0	chr4	112144839	112145072	(78069483)	C	AluJb	SINE/Alu	(30)	282	34	2948772
36	2.9	0.0	0.0	chr4	112861834	112861868	(77352687)	+	(AG)n	Simple_repeat	1	35	(0)	2950015
578	28.0	8.0	0.5	chr4	112861958	112862176	(77352379)	+	MIR	SINE/MIR	24	260	(2)	2950016
32	16.4	0.0	0.0	chr4	112880038	112880092	(77334463)	+	(AC)n	Simple_repeat	1	55	(0)	2950055
229	29.5	11.7	0.0	chr4	112880104	112880232	(77334323)	C	L1MA10	LINE/L1	(9)	6325	6180	2950056
37	5.0	0.0	0.0	chr4	113437812	113437852	(76776703)	+	(TC)n	Simple_repeat	1	41	(0)	2950802
579	30.1	10.0	4.9	chr4	113575302	113575914	(76638641)	C	Tigger15a	DNA/TcMar-Tigger	(1)	714	68	2950970
273	32.5	5.5	1.4	chr4	113695345	113695553	(76519002)	+	L2-1_AMi	LINE/L2	390	607	(628)	2951161
1590	26.6	5.7	1.7	chr4	113695555	113696179	(76518376)	+	L2a	LINE/L2	2565	3195	(231)	2951162
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
24	6.5	0.0	0.0	chr4	115270523	115270554	(74944001)	+	(TC)n	Simple_repeat	1	32	(0)	2953054
23	12.4	0.0	0.0	chr4	115270565	115270599	(74943956)	+	(GA)n	Simple_repeat	1	35	(0)	2953055
37	2.8	0.0	0.0	chr4	115270672	115270707	(74943848)	+	(GT)n	Simple_repeat	1	36	(0)	2953056
49	2.2	0.0	0.0	chr4	118466669	118466714	(71747841)	+	(TC)n	Simple_repeat	1	46	(0)	2956983
30	2.9	0.0	0.0	chr4	118466715	118466749	(71747806)	+	(AC)n	Simple_repeat	1	35	(0)	2956984
662	17.4	3.3	3.8	chr4	118566485	118566669	(71647886)	C	Arthur1B	DNA/hAT-Tip100	(16)	1209	1026	2957112
554	23.7	23.7	2.1	chr4	118864946	118865439	(71349116)	C	LTR50	LTR/ERVL	(111)	684	1	2957615
295	28.0	2.4	5.6	chr4	118890568	118890697	(71323858)	+	MIR3	SINE/MIR	3	129	(139)	2957662
43	0.0	0.0	0.0	chr4	118890698	118890734	(71323821)	+	(TC)n	Simple_repeat	1	37	(0)	2957663
20	0.0	0.0	0.0	chr4	118890735	118890756	(71323799)	+	(GT)n	Simple_repeat	1	22	(0)	2957664
36	8.4	0.0	1.9	chr4	120158440	120158492	(70056063)	+	(GA)n	Simple_repeat	1	53	(0)	2959444
46	0.0	4.3	0.0	chr4	120215578	120215623	(69998932)	+	(AG)n	Simple_repeat	1	48	(0)	2959514
213	31.9	11.7	6.0	chr4	120224343	120224592	(69989963)	+	L2a	LINE/L2	3138	3403	(23)	2959527
39	2.7	0.0	0.0	chr4	120224595	120224632	(69989923)	+	(CT)n	Simple_repeat	1	38	(0)	2959528
25	3.0	2.8	2.7	chr4	120224633	120224656	(69989899)	+	(AT)n	Simple_repeat	1	25	(0)	2959529
2069	14.7	0.0	0.7	chr4	120224657	120224955	(69989600)	C	AluSz	SINE/Alu	(14)	298	2	2959530
45	30.8	0.8	3.8	chr4	121226082	121226319	(68988236)	+	A-rich	Low_complexity	1	230	(0)	2960787
53	32.8	1.6	0.0	chr4	121226109	121226301	(68988254)	+	GA-rich	Low_complexity	1	196	(0)	2960788
56	4.5	2.9	0.0	chr4	121977626	121977693	(68236862)	+	(TC)n	Simple_repeat	1	70	(0)	2961896
19	0.0	0.0	0.0	chr4	122205642	122205662	(68008893)	+	(TC)n	Simple_repeat	1	21	(0)	2962216
15	5.6	0.0	0.0	chr4	122205705	122205723	(68008832)	+	(TC)n	Simple_repeat	1	19	(0)	2962216
15	5.6	0.0	0.0	chr4	122205760	122205778	(68008777)	+	(TC)n	Simple_repeat	1	19	(0)	2962216
38	2.8	0.0	0.0	chr4	122205781	122205817	(68008738)	+	(CA)n	Simple_repeat	1	37	(0)	2962217
932	18.9	9.9	2.5	chr4	123645316	123645511	(66569044)	C	AluJr4	SINE/Alu	(30)	282	71	2964317
72	2.9	0.0	0.0	chr4	123645512	123645581	(66568974)	+	(CT)n	Simple_repeat	1	70	(0)	2964318
19	0.0	0.0	0.0	chr4	123645582	123645602	(66568953)	+	(AT)n	Simple_repeat	1	21	(0)	2964319
469	32.9	17.1	2.0	chr4	123776207	123776500	(66438055)	C	L2	LINE/L2	(830)	2589	2276	2964482
43	2.5	0.0	0.0	chr4	123776501	123776541	(66438014)	+	(GA)n	Simple_repeat	1	41	(0)	2964483
469	32.9	17.1	2.0	chr4	123776542	123776845	(66437710)	C	L2	LINE/L2	(1144)	2275	1882	2964482
1813	12.8	11.8	0.9	chr4	124732790	124732975	(65481580)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	2965678
37	7.0	0.0	0.0	chr4	124732976	124733020	(65481535)	+	(CT)n	Simple_repeat	1	45	(0)	2965679
1813	12.8	11.8	0.9	chr4	124733021	124733172	(65481383)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	2965678
60	10.5	0.0	0.0	chr4	124748479	124748570	(65465985)	+	(TC)n	Simple_repeat	1	92	(0)	2965701
460	36.0	2.0	0.5	chr4	125360253	125360453	(64854102)	+	MIRb	SINE/MIR	34	237	(31)	2966513
270	28.8	12.6	2.3	chr4	125360525	125360652	(64853903)	C	L2c	LINE/L2	(0)	3387	3245	2966514
26	0.0	0.0	0.0	chr4	125440582	125440610	(64773945)	+	(TG)n	Simple_repeat	1	29	(0)	2966619
40	0.0	0.0	0.0	chr4	125440611	125440644	(64773911)	+	(GA)n	Simple_repeat	1	34	(0)	2966620
234	42.1	8.0	1.1	chr4	125440653	125441092	(64773463)	+	L2	LINE/L2	2304	2776	(643)	2966621
2164	13.9	0.0	0.7	chr4	127547996	127548304	(62666251)	+	AluSx1	SINE/Alu	1	307	(5)	2969202
88	1.3	0.0	0.0	chr4	127548310	127548388	(62666167)	+	(AG)n	Simple_repeat	1	79	(0)	2969203
42	3.3	3.0	2.9	chr4	127548389	127548454	(62666101)	+	(AAGA)n	Simple_repeat	1	68	(0)	2969204
2193	17.2	4.5	1.7	chr4	128166471	128166930	(62047625)	C	L1MA9	LINE/L1	(43)	6269	5794	2970308
48	0.0	0.0	0.0	chr4	128166931	128166971	(62047584)	+	(TC)n	Simple_repeat	1	41	(0)	2970309
2193	17.2	4.5	1.7	chr4	128166972	128166984	(62047571)	C	L1MA9	LINE/L1	(519)	5793	5782	2970308
29	34.7	0.0	0.0	chr4	128166985	128167077	(62047478)	+	(AC)n	Simple_repeat	1	93	(0)	2970310
989	21.3	0.4	8.4	chr4	128167078	128167339	(62047216)	C	L1MA9	LINE/L1	(530)	5782	5542	2970308
67	1.6	1.5	0.0	chr4	128302736	128302800	(61911755)	+	(AG)n	Simple_repeat	1	66	(0)	2970525
499	31.2	5.3	0.6	chr4	128302917	128303129	(61911426)	C	MIRc	SINE/MIR	(27)	241	14	2970526
61	0.0	1.7	1.6	chr4	128553015	128553074	(61661481)	+	(CT)n	Simple_repeat	1	61	(0)	2970885
479	32.9	7.5	11.4	chr4	128789753	128790250	(61424305)	+	MLT1O	LTR/ERVL-MaLR	51	527	(15)	2971366
1128	26.1	3.9	8.3	chr4	130636445	130636637	(59577918)	+	MLT1B	LTR/ERVL-MaLR	1	187	(203)	2973670
35	8.8	0.0	0.0	chr4	130636638	130636685	(59577870)	+	(TC)n	Simple_repeat	1	48	(0)	2973671
1128	26.1	3.9	8.3	chr4	130636686	130636900	(59577655)	+	MLT1B	LTR/ERVL-MaLR	188	390	(0)	2973670
35	0.0	0.0	0.0	chr4	137664539	137664568	(52549987)	+	(GA)n	Simple_repeat	1	30	(0)	2981941
38	12.0	0.0	0.0	chr4	137775253	137775316	(52439239)	+	(TC)n	Simple_repeat	1	64	(0)	2982079
63	6.9	0.0	0.0	chr4	138177410	138177485	(52037070)	+	(TC)n	Simple_repeat	1	76	(0)	2982559
452	35.4	3.0	4.6	chr4	138177508	138177747	(52036808)	+	MIRb	SINE/MIR	15	250	(18)	2982560
59	0.0	0.0	0.0	chr4	138451998	138452047	(51762508)	+	(TC)n	Simple_repeat	1	50	(0)	2982929
43	0.0	0.0	0.0	chr4	138833328	138833364	(51381191)	+	(TC)n	Simple_repeat	1	37	(0)	2983428
30	0.0	0.0	0.0	chr4	138833398	138833423	(51381132)	+	(TC)n	Simple_repeat	1	26	(0)	2983428
53	2.8	6.6	1.2	chr4	138833456	138833531	(51381024)	+	(TC)n	Simple_repeat	1	81	(0)	2983428
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
76	28.6	2.2	5.8	chr4	139163907	139164274	(51050281)	+	GA-rich	Low_complexity	1	376	(0)	2984068
20	13.7	0.0	0.0	chr4	139808926	139808957	(50405598)	+	(GT)n	Simple_repeat	1	32	(0)	2985284
43	0.0	0.0	0.0	chr4	139946890	139946926	(50267629)	+	(CA)n	Simple_repeat	1	37	(0)	2985485
24	0.0	0.0	0.0	chr4	139946927	139946953	(50267602)	+	(TC)n	Simple_repeat	1	27	(0)	2985486
30	20.2	1.6	0.0	chr4	140028412	140028474	(50186081)	+	(TC)n	Simple_repeat	1	64	(0)	2985614
38	0.0	0.0	0.0	chr4	140071756	140071788	(50142767)	+	(AG)n	Simple_repeat	1	33	(0)	2985685
14	24.4	3.6	1.8	chr4	140150977	140151031	(50063524)	+	G-rich	Low_complexity	1	57	(0)	2985796
12	7.9	7.4	0.0	chr4	140151677	140151703	(50062852)	+	G-rich	Low_complexity	1	29	(0)	2985798
12	23.4	0.0	4.5	chr4	140151741	140151784	(50062771)	+	A-rich	Low_complexity	1	44	(0)	2985799
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
17333	11.4	2.5	1.7	chr4	140363294	140365988	(49848567)	+	Tigger2	DNA/TcMar-Tigger	1	2718	(0)	2986139
26	0.0	0.0	0.0	chr4	140709220	140709248	(49505307)	+	(TC)n	Simple_repeat	1	29	(0)	2986621
48	0.0	0.0	0.0	chr4	140709249	140709289	(49505266)	+	(CA)n	Simple_repeat	1	41	(0)	2986622
390	26.0	9.1	3.2	chr4	140809922	140810076	(49404479)	+	MamRep564	Unknown	64	228	(129)	2986829
33	6.1	5.8	0.0	chr4	140810115	140810166	(49404389)	+	(CT)n	Simple_repeat	1	55	(0)	2986830
1781	18.2	3.9	0.0	chr4	140810167	140810435	(49404120)	C	AluJb	SINE/Alu	(31)	281	2	2986831
859	18.6	2.3	1.8	chr4	140811175	140811344	(49403211)	C	MLT2D	LTR/ERVL	(243)	171	1	2986832
42	4.6	0.0	0.0	chr4	140899931	140899975	(49314580)	+	(TC)n	Simple_repeat	1	45	(0)	2986977
27	0.0	0.0	0.0	chr4	140899976	140900005	(49314550)	+	(GT)n	Simple_repeat	1	30	(0)	2986978
262	12.5	20.0	0.0	chr4	140900029	140900092	(49314463)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	2986979
43	0.0	2.2	2.2	chr4	140962051	140962095	(49252460)	+	(TC)n	Simple_repeat	1	46	(0)	2987065
20	10.8	0.0	0.0	chr4	140962096	140962123	(49252432)	+	(AC)n	Simple_repeat	2	29	(0)	2987066
688	22.0	7.4	4.7	chr4	142264744	142264953	(47949602)	+	MLT1B	LTR/ERVL-MaLR	1	213	(183)	2988724
37	7.2	0.0	0.0	chr4	142264954	142264998	(47949557)	+	(CT)n	Simple_repeat	1	45	(0)	2988725
986	22.4	0.5	2.1	chr4	142264999	142265215	(47949340)	+	MLT1B	LTR/ERVL-MaLR	189	382	(14)	2988724
30	18.1	0.0	0.0	chr4	142405125	142405180	(47809375)	+	GA-rich	Low_complexity	1	56	(0)	2988908
232	28.4	1.1	1.1	chr4	143378466	143378554	(46836001)	C	Tigger16a	DNA/TcMar-Tigger	(444)	513	425	2990239
51	0.0	0.0	0.0	chr4	143378630	143378673	(46835882)	+	(TC)n	Simple_repeat	1	44	(0)	2990242
11	3.1	14.3	2.5	chr4	143378775	143378809	(46835746)	+	(GCCTCTG)n	Simple_repeat	1	40	(0)	2990243
1348	26.6	2.0	3.5	chr4	144405061	144405145	(45809410)	+	BLACKJACK	DNA/hAT-Blackjack	8	92	(2877)	2991556
50	7.0	2.6	1.3	chr4	144405146	144405222	(45809333)	+	(TC)n	Simple_repeat	1	79	(0)	2991557
1348	26.6	2.0	3.5	chr4	144405223	144405537	(45809018)	+	BLACKJACK	DNA/hAT-Blackjack	93	402	(2567)	2991556
5066	23.6	9.8	5.3	chr4	145611300	145611818	(44602737)	+	MSTD-int	LTR/ERVL-MaLR	2	514	(1221)	2993161
41	2.6	0.0	0.0	chr4	145611819	145611858	(44602697)	+	(AG)n	Simple_repeat	1	40	(0)	2993162
5066	23.6	9.8	5.3	chr4	145611859	145611956	(44602599)	+	MSTD-int	LTR/ERVL-MaLR	515	589	(1146)	2993161
3128	17.7	4.8	1.4	chr4	145611957	145612604	(44601951)	C	LTR51	LTR/ERV1	(0)	671	1	2993163
293	28.4	1.2	0.0	chr4	145885518	145885598	(44328957)	C	MIR3	SINE/MIR	(5)	203	122	2993537
57	1.9	0.0	0.0	chr4	145885605	145885657	(44328898)	+	(AG)n	Simple_repeat	1	53	(0)	2993538
17	19.7	2.8	0.0	chr4	145938133	145938168	(44276387)	+	GA-rich	Low_complexity	1	37	(0)	2993606
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
2208	9.2	0.0	0.7	chr4	146103881	146104161	(44110394)	+	AluYm1	SINE/Alu	1	279	(32)	2993825
108	3.7	0.0	0.0	chr4	146104170	146104279	(44110276)	+	(AG)n	Simple_repeat	1	110	(0)	2993826
478	32.5	9.9	0.5	chr4	146104376	146104576	(44109979)	+	MIRb	SINE/MIR	15	236	(32)	2993827
60	0.0	0.0	0.0	chr4	146643043	146643093	(43571462)	+	(CT)n	Simple_repeat	1	51	(0)	2994609
950	23.5	12.4	1.2	chr4	147649078	147649405	(42565150)	C	MSTD	LTR/ERVL-MaLR	(25)	371	2	2995950
1979	14.6	0.0	1.4	chr4	147709295	147709574	(42504981)	+	AluSz6	SINE/Alu	1	276	(36)	2996085
61	8.8	0.0	0.0	chr4	147709575	147709661	(42504894)	+	(GAGA)n	Simple_repeat	1	87	(0)	2996086
1230	10.5	4.7	0.6	chr4	147709662	147709843	(42504712)	+	MER41B	LTR/ERV1	445	634	(0)	2996084
1044	13.2	0.0	4.4	chr4	147798533	147798691	(42415864)	+	AluSz	SINE/Alu	36	187	(125)	2996270
68	0.0	0.0	0.0	chr4	147798725	147798782	(42415773)	+	(CT)n	Simple_repeat	1	58	(0)	2996271
257	26.8	4.1	0.0	chr4	148054339	148054409	(42160146)	+	MIRb	SINE/MIR	136	209	(59)	2996647
1062	24.8	10.4	0.3	chr4	148059689	148059983	(42154572)	C	LTR40a	LTR/ERVL	(0)	519	192	2996655
39	5.1	4.6	2.9	chr4	148059984	148060048	(42154507)	+	(GA)n	Simple_repeat	1	68	(0)	2996656
269	15.2	0.0	2.1	chr4	148060052	148060098	(42154457)	C	MER105	DNA	(157)	46	1	2996654
194	33.2	18.2	1.1	chr4	148263744	148264011	(41950544)	+	L2c	LINE/L2	3063	3386	(1)	2996901
1748	13.8	5.2	5.0	chr4	148274361	148274698	(41939857)	+	THE1D	LTR/ERVL-MaLR	1	348	(33)	2996918
2298	10.4	2.6	0.0	chr4	148274699	148274997	(41939558)	C	AluSq2	SINE/Alu	(6)	307	1	2996919
1762	11.2	0.8	0.0	chr4	149836843	149837074	(40377481)	+	AluSx	SINE/Alu	64	297	(15)	2998898
63	1.6	3.1	0.0	chr4	149837075	149837139	(40377416)	+	(AG)n	Simple_repeat	1	67	(0)	2998899
15	4.2	4.0	0.0	chr4	149837140	149837164	(40377391)	+	(AGGAA)n	Simple_repeat	1	26	(0)	2998900
545	15.6	0.0	0.0	chr4	149871915	149871991	(40342564)	+	AluJr	SINE/Alu	36	112	(200)	2998935
55	3.7	0.0	0.0	chr4	149871992	149872047	(40342508)	+	(TC)n	Simple_repeat	1	56	(0)	2998936
35	38.5	0.0	0.0	chr4	149872048	149872168	(40342387)	+	(AT)n	Simple_repeat	1	121	(0)	2998937
1235	22.6	1.7	1.0	chr4	149872169	149872459	(40342096)	C	L1ME1	LINE/L1	(134)	6218	5926	2998938
48	22.8	5.1	1.8	chr4	150581919	150582074	(39632481)	+	GA-rich	Low_complexity	1	164	(0)	2999956
1460	13.9	0.0	0.0	chr4	150737255	150737455	(39477100)	+	AluSx1	SINE/Alu	78	278	(34)	3000180
45	17.4	1.8	3.5	chr4	150737458	150737568	(39476987)	+	GA-rich	Low_complexity	1	113	(0)	3000181
390	26.1	4.2	3.0	chr4	150974228	150974393	(39240162)	+	L1MEf	LINE/L1	514	681	(5944)	3000539
19	0.0	4.2	0.0	chr4	151678435	151678458	(38536097)	+	(TC)n	Simple_repeat	1	25	(0)	3001839
182	9.7	0.0	6.1	chr4	151765773	151765805	(38448750)	C	LFSINE_Vert	SINE/tRNA	(11)	448	418	3001946
43	0.0	0.0	0.0	chr4	151765853	151765889	(38448666)	+	(AG)n	Simple_repeat	1	37	(0)	3001947
1884	14.5	5.6	3.1	chr4	152195487	152195746	(38018809)	+	MLT2C2	LTR/ERVL	107	357	(40)	3002601
40	0.0	0.0	0.0	chr4	152195747	152195780	(38018775)	+	(AG)n	Simple_repeat	1	34	(0)	3002603
1601	16.8	7.4	8.5	chr4	152195781	152195809	(38018746)	+	MLT2C2	LTR/ERVL	358	392	(5)	3002601
27	6.1	0.0	0.0	chr4	152535997	152536031	(37678524)	+	(CAGCGG)n	Simple_repeat	1	35	(0)	3003140
42	0.0	0.0	0.0	chr4	152930963	152930998	(37283557)	+	(AC)n	Simple_repeat	1	36	(0)	3003761
24	0.0	0.0	0.0	chr4	152930999	152931025	(37283530)	+	(TC)n	Simple_repeat	1	27	(0)	3003762
133	32.4	1.4	0.5	chr4	153221662	153222093	(36992462)	+	G-rich	Low_complexity	1	438	(0)	3004256
30	6.4	3.9	1.9	chr4	153448766	153448789	(36765766)	+	(TC)n	Simple_repeat	1	24	(0)	3004683
1682	17.1	7.0	0.4	chr4	153448790	153449070	(36765485)	C	AluJo	SINE/Alu	(8)	304	4	3004684
747	25.6	3.3	4.5	chr4	153487411	153487682	(36726873)	+	LTR88b	LTR/Gypsy?	8	276	(586)	3004761
31	0.0	0.0	0.0	chr4	153487694	153487720	(36726835)	+	(GT)n	Simple_repeat	1	27	(0)	3004762
17	0.0	0.0	0.0	chr4	153487721	153487739	(36726816)	+	(AG)n	Simple_repeat	1	19	(0)	3004763
15	13.7	0.0	0.0	chr4	153487765	153487788	(36726767)	+	(TG)n	Simple_repeat	1	24	(0)	3004764
17	16.4	0.0	0.0	chr4	153487855	153487888	(36726667)	+	GA-rich	Low_complexity	1	34	(0)	3004765
15	20.7	0.0	2.9	chr4	153487923	153487957	(36726598)	+	GA-rich	Low_complexity	1	35	(0)	3004765
42	0.0	0.0	0.0	chr4	154417159	154417204	(35797351)	+	(GT)n	Simple_repeat	1	46	(0)	3005998
56	0.0	0.0	0.0	chr4	154417205	154417252	(35797303)	+	(GA)n	Simple_repeat	1	48	(0)	3005999
52	5.7	4.1	0.0	chr4	154463684	154463756	(35750799)	+	(TC)n	Simple_repeat	1	76	(0)	3006076
43	7.4	0.0	0.0	chr4	154626170	154626226	(35588329)	+	(AG)n	Simple_repeat	1	57	(0)	3006316
936	20.2	6.7	0.0	chr4	155391827	155391994	(34822561)	+	AluJb	SINE/Alu	87	266	(46)	3007347
529	20.2	0.0	0.0	chr4	155391998	155392081	(34822474)	+	AluJb	SINE/Alu	190	273	(39)	3007348
83	22.8	2.1	0.0	chr4	155392084	155392276	(34822279)	+	GA-rich	Low_complexity	1	197	(0)	3007349
3382	17.9	1.1	0.2	chr4	155674499	155675118	(34539437)	C	Tigger3b	DNA/TcMar-Tigger	(603)	628	3	3007767
14	11.6	3.5	0.0	chr4	155675790	155675818	(34538737)	+	(CTTCT)n	Simple_repeat	1	30	(0)	3007768
188	32.2	14.4	4.0	chr4	155675911	155676059	(34538496)	+	MamTip2	DNA/hAT-Tip100	51	217	(88)	3007769
2233	20.0	1.4	0.2	chr4	155679299	155679725	(34534830)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3007778
562	14.7	10.4	3.7	chr4	156019241	156019337	(34195218)	+	MER34C_	LTR/ERV1	115	209	(376)	3008240
41	6.4	0.0	0.0	chr4	156019338	156019386	(34195169)	+	(TC)n	Simple_repeat	1	49	(0)	3008241
1694	16.7	5.1	10.4	chr4	156019387	156019840	(34194715)	+	MER34C_	LTR/ERV1	118	538	(47)	3008240
32	7.8	0.0	0.0	chr4	156949430	156949470	(33265085)	+	(TC)n	Simple_repeat	1	41	(0)	3009468
13	8.7	4.0	0.0	chr4	156959255	156959279	(33255276)	+	(AAAC)n	Simple_repeat	1	26	(0)	3009477
52	2.1	0.0	0.0	chr4	158834289	158834337	(31380218)	+	(TC)n	Simple_repeat	1	49	(0)	3011986
1747	16.8	2.9	1.5	chr4	159062680	159062697	(31151858)	C	AluJb	SINE/Alu	(21)	291	274	3012323
31	0.0	0.0	0.0	chr4	159062698	159062724	(31151831)	+	(TC)n	Simple_repeat	1	27	(0)	3012324
1747	16.8	2.9	1.5	chr4	159062725	159062979	(31151576)	C	AluJb	SINE/Alu	(48)	264	14	3012323
66	3.1	0.0	0.0	chr4	159104490	159104554	(31110001)	+	(GA)n	Simple_repeat	1	65	(0)	3012419
24	9.5	0.0	0.0	chr4	159104555	159104588	(31109967)	+	(TG)n	Simple_repeat	1	34	(0)	3012420
1458	30.5	7.8	1.6	chr4	161601464	161602165	(28612390)	+	L1MCc	LINE/L1	824	1660	(5468)	3015553
60	5.5	0.0	0.0	chr4	161602218	161602293	(28612262)	+	(AG)n	Simple_repeat	1	76	(0)	3015556
891	29.6	10.8	5.6	chr4	161602306	161603114	(28611441)	+	L1MCc	LINE/L1	1677	2665	(4372)	3015553
2168	14.1	0.7	0.0	chr4	164899308	164899611	(25314944)	+	AluSz	SINE/Alu	1	306	(6)	3020115
77	17.7	3.9	1.1	chr4	164899612	164899774	(25314781)	+	A-rich	Low_complexity	16	183	(0)	3020116
235	25.0	0.0	0.0	chr4	164899783	164899834	(25314721)	C	MER96B	DNA/hAT-Tip100	(195)	222	171	3020117
1281	9.8	0.0	3.8	chr4	165456527	165456544	(24758011)	C	AluSx3	SINE/Alu	(3)	308	291	3021138
31	3.3	0.0	0.0	chr4	165456545	165456575	(24757980)	+	(TC)n	Simple_repeat	1	31	(0)	3021139
1281	9.8	0.0	3.8	chr4	165456576	165456739	(24757816)	C	AluSx3	SINE/Alu	(21)	290	133	3021138
1306	29.3	12.6	2.5	chr4	165576413	165577153	(24637402)	+	HAL1	LINE/L1	621	1461	(1046)	3021306
46	4.3	0.0	0.0	chr4	165577154	165577201	(24637354)	+	(GA)n	Simple_repeat	1	48	(0)	3021311
1306	29.3	12.6	2.5	chr4	165577202	165577273	(24637282)	+	HAL1	LINE/L1	1462	1528	(979)	3021306
304	35.8	5.3	3.2	chr4	167456013	167456197	(22758358)	+	LTR33A_	LTR/ERVL	26	214	(317)	3023591
83	1.4	0.0	0.0	chr4	167456269	167456343	(22758212)	+	(TC)n	Simple_repeat	1	75	(0)	3023592
1559	19.7	0.3	14.5	chr4	168475693	168476126	(21738429)	+	MLT1A	LTR/ERVL-MaLR	1	372	(2)	3024862
17	9.7	5.7	2.7	chr4	168598477	168598511	(21616044)	+	GA-rich	Low_complexity	1	37	(0)	3025044
1785	17.6	0.7	3.1	chr4	168811453	168811741	(21402814)	+	AluJo	SINE/Alu	1	282	(30)	3025374
28	5.7	0.0	0.0	chr4	168811742	168811776	(21402779)	+	(CT)n	Simple_repeat	1	35	(0)	3025375
40	0.0	0.0	0.0	chr4	168811777	168811810	(21402745)	+	(CA)n	Simple_repeat	1	34	(0)	3025376
1510	19.8	6.3	5.8	chr4	169015869	169016051	(21198504)	+	MLT1B	LTR/ERVL-MaLR	1	173	(217)	3025645
71	1.6	0.0	0.0	chr4	169016052	169016116	(21198439)	+	(TC)n	Simple_repeat	1	65	(0)	3025646
1510	19.8	6.3	5.8	chr4	169016117	169016312	(21198243)	+	MLT1B	LTR/ERVL-MaLR	174	381	(9)	3025645
189	32.6	7.1	12.5	chr4	169312672	169312895	(20901660)	+	L2c	LINE/L2	3097	3307	(80)	3026151
4209	18.5	4.8	4.4	chr4	169312923	169313113	(20901442)	C	L1MB8	LINE/L1	(5)	6173	6001	3026152
1909	14.9	13.6	0.5	chr4	172761478	172761662	(17452893)	+	MSTA	LTR/ERVL-MaLR	1	210	(218)	3030701
42	4.7	0.0	0.0	chr4	172761663	172761707	(17452848)	+	(CT)n	Simple_repeat	1	45	(0)	3030702
1909	14.9	13.6	0.5	chr4	172761708	172761893	(17452662)	+	MSTA	LTR/ERVL-MaLR	211	428	(0)	3030701
1653	26.6	3.3	4.6	chr4	172962860	172963576	(17250979)	+	L2a	LINE/L2	2708	3425	(1)	3030952
8274	5.8	1.2	2.7	chr4	173099533	173100709	(17113846)	+	Harlequin-int	LTR/ERV1	263	1421	(5475)	3031129
196	34.4	0.0	0.0	chr4	173265502	173265565	(16948990)	+	MIRb	SINE/MIR	205	268	(0)	3031370
43	4.5	0.0	0.0	chr4	173265588	173265633	(16948922)	+	(TC)n	Simple_repeat	1	46	(0)	3031371
19	27.8	1.5	1.4	chr4	173265647	173265667	(16948888)	+	(CCCT)n	Simple_repeat	1	68	(0)	3031372
14	18.9	2.2	4.3	chr4	173265668	173265713	(16948842)	+	(CTCCCT)n	Simple_repeat	1	47	(0)	3031373
16	19.1	0.0	0.0	chr4	173934942	173934971	(16279584)	+	(T)n	Simple_repeat	1	30	(0)	3032296
56	18.6	0.9	0.0	chr4	174120517	174120622	(16093933)	+	(TG)n	Simple_repeat	1	107	(0)	3032541
29	8.1	0.0	0.0	chr4	174216187	174216225	(15998330)	+	(GA)n	Simple_repeat	1	39	(0)	3032657
19	28.0	0.0	1.6	chr4	174216226	174216249	(15998306)	+	A-rich	Low_complexity	1	63	(0)	3032658
24	29.7	3.2	3.1	chr4	175709198	175709289	(14505266)	+	(CTTC)n	Simple_repeat	1	92	(0)	3034529
30	8.9	1.5	4.5	chr4	175709290	175709354	(14505201)	+	(TC)n	Simple_repeat	1	66	(0)	3034530
24	29.7	3.2	3.1	chr4	175709355	175709385	(14505170)	+	(CTTC)n	Simple_repeat	1	31	(0)	3034531
2399	9.6	0.0	0.0	chr4	175709448	175709748	(14504807)	+	AluSg	SINE/Alu	1	301	(9)	3034532
3127	26.9	7.0	6.4	chr4	175981284	175983978	(14230577)	C	L1ME1	LINE/L1	(42)	6137	3444	3034905
36	5.2	0.0	0.0	chr4	175983982	175984021	(14230534)	+	(CT)n	Simple_repeat	1	40	(0)	3034906
22	3.8	0.0	0.0	chr4	175984024	175984050	(14230505)	+	(CA)n	Simple_repeat	1	27	(0)	3034907
242	24.7	2.7	2.7	chr4	175984056	175984130	(14230425)	C	L1M5	LINE/L1	(824)	5419	5345	3034908
39	6.8	0.0	0.0	chr4	176159263	176159309	(14055246)	+	(AC)n	Simple_repeat	1	47	(0)	3035156
36	12.7	0.0	3.1	chr4	176159314	176159377	(14055178)	+	GA-rich	Low_complexity	1	64	(0)	3035157
27	23.1	0.0	3.7	chr4	176159378	176159394	(14055161)	+	(GAGACA)n	Simple_repeat	1	81	(0)	3035158
11	21.1	2.5	2.4	chr4	176159496	176159535	(14055020)	+	(ATTCTAT)n	Simple_repeat	1	41	(0)	3035159
48	7.1	0.0	0.0	chr4	179960586	179960644	(10253911)	+	(TC)n	Simple_repeat	1	59	(0)	3040162
2182	12.3	0.0	1.3	chr4	179983219	179983527	(10231028)	+	AluSx1	SINE/Alu	1	305	(7)	3040187
18	8.3	0.0	0.0	chr4	179983528	179983551	(10231004)	+	(AT)n	Simple_repeat	1	24	(0)	3040188
39	8.0	0.0	0.0	chr4	179983551	179983603	(10230952)	+	(AG)n	Simple_repeat	1	53	(0)	3040189
23	19.2	0.0	6.0	chr4	180058811	180058877	(10155678)	+	GA-rich	Low_complexity	1	67	(0)	3040277
33	0.0	0.0	0.0	chr4	180349628	180349655	(9864900)	+	(GA)n	Simple_repeat	1	28	(0)	3040645
1004	26.2	4.5	3.1	chr4	181088962	181089249	(9125306)	C	MLT1F2	LTR/ERVL-MaLR	(79)	481	190	3041632
49	24.9	1.9	6.4	chr4	181089252	181089440	(9125115)	+	GA-rich	Low_complexity	1	181	(0)	3041633
2667	6.4	0.0	0.0	chr4	181089441	181089751	(9124804)	+	AluYk4	SINE/Alu	1	311	(0)	3041634
28	3.1	0.0	0.0	chr4	181849917	181849949	(8364606)	+	(TC)n	Simple_repeat	1	33	(0)	3042636
44	0.0	0.0	0.0	chr4	181849950	181849987	(8364568)	+	(CA)n	Simple_repeat	1	38	(0)	3042637
36	2.9	0.0	0.0	chr4	181966990	181967024	(8247531)	+	(TC)n	Simple_repeat	1	35	(0)	3042776
31	3.3	0.0	0.0	chr4	182805948	182805978	(7408577)	+	(CT)n	Simple_repeat	1	31	(0)	3043910
41	0.0	0.0	0.0	chr4	183155190	183155224	(7059331)	+	(GA)n	Simple_repeat	1	35	(0)	3044493
95	20.1	3.1	0.9	chr4	183527392	183527614	(6686941)	+	A-rich	Low_complexity	1	230	(0)	3045102
17	13.1	0.0	0.0	chr4	183527590	183527615	(6686940)	+	(A)n	Simple_repeat	1	26	(0)	3045103
793	17.9	0.0	0.0	chr4	183527616	183527732	(6686823)	C	AluJo	SINE/Alu	(194)	118	2	3045104
15	3.6	3.1	6.1	chr4	183615572	183615614	(6598941)	+	(TTCT)n	Simple_repeat	1	41	(0)	3045283
46	4.3	0.0	0.0	chr4	183615615	183615662	(6598893)	+	(CT)n	Simple_repeat	1	48	(0)	3045284
2147	10.2	0.0	0.0	chr4	183615674	183615948	(6598607)	C	AluSx1	SINE/Alu	(37)	275	1	3045285
1388	25.4	3.5	6.3	chr4	184044293	184044422	(6170133)	C	L1MC4	LINE/L1	(11)	8031	7777	3045962
36	10.0	1.5	1.5	chr4	184044423	184044488	(6170067)	+	(TC)n	Simple_repeat	1	67	(0)	3045963
1388	28.6	6.4	5.4	chr4	184044489	184044812	(6169743)	C	L1MC4	LINE/L1	(116)	7926	7590	3045962
386	35.6	2.0	0.0	chr4	186136843	186136936	(4077619)	+	MIR	SINE/MIR	107	203	(59)	3049256
87	2.5	0.0	0.0	chr4	186136937	186137019	(4077536)	+	(TC)n	Simple_repeat	1	83	(0)	3049257
386	35.6	2.0	0.0	chr4	186137020	186137070	(4077485)	+	MIR	SINE/MIR	204	254	(8)	3049256
14	15.2	2.0	7.7	chr4	186723601	186723651	(3490904)	+	(CCGCCCG)n	Simple_repeat	1	52	(0)	3050036
2364	23.3	3.6	0.8	chr4	186829334	186829926	(3384629)	+	MLT1E2	LTR/ERVL-MaLR	1	610	(17)	3050205
2331	26.8	8.4	2.5	chr4	186829942	186830788	(3383767)	+	L2	LINE/L2	1666	2567	(852)	3050203
11392	9.6	0.6	5.0	chr4	186986845	186987379	(3227176)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1041	3050400
83	2.4	0.0	1.1	chr4	186987380	186987466	(3227089)	+	(TTTCT)n	Simple_repeat	1	87	(0)	3050401
11392	9.6	0.6	5.0	chr4	186987467	186987527	(3227028)	C	THE1B-int	LTR/ERVL-MaLR	(540)	1040	1037	3050400
35	5.0	0.0	0.0	chr4	186987528	186987569	(3226986)	+	(TCCCTTCCTT)n	Simple_repeat	1	42	(0)	3050402
2099	13.4	0.0	0.3	chr4	186987571	186987861	(3226694)	C	AluSq2	SINE/Alu	(22)	291	2	3050403
17	19.7	0.0	4.0	chr4	190019680	190019729	(194826)	+	(CTCTCC)n	Simple_repeat	1	50	(0)	3054522
31	8.8	2.1	0.0	chr4	190019740	190019787	(194768)	+	(CT)n	Simple_repeat	1	49	(0)	3054523
17	20.3	6.0	2.8	chr4	190019836	190019902	(194653)	+	(TGTCTG)n	Simple_repeat	1	71	(0)	3054524
22	9.2	0.0	0.0	chr5	323965	323999	(181214260)	+	(CTTC)n	Simple_repeat	1	35	(0)	3055312
13	30.4	0.0	0.0	chr5	324000	324006	(181214253)	+	(TCTT)n	Simple_repeat	2	43	(0)	3055313
2177	12.4	0.0	3.7	chr5	324009	324021	(181214238)	C	AluSg	SINE/Alu	(0)	310	298	3055314
35	5.3	0.0	0.0	chr5	324022	324060	(181214199)	+	(TC)n	Simple_repeat	1	39	(0)	3055315
2177	12.4	0.0	3.7	chr5	324061	324368	(181213891)	C	AluSg	SINE/Alu	(13)	297	1	3055314
11	14.4	7.5	2.3	chr5	344074	344113	(181194146)	+	G-rich	Low_complexity	1	43	(0)	3055345
13	19.6	2.9	0.0	chr5	344255	344289	(181193970)	+	(GGC)n	Simple_repeat	1	36	(0)	3055346
155	24.3	0.8	1.0	chr5	1034987	1035366	(180502893)	+	(AGTG)n	Simple_repeat	1	383	(0)	3055908
736	22.4	0.2	0.2	chr5	1198319	1199900	(180338359)	+	(CTCTCT)n	Simple_repeat	1	1585	(0)	3056039
89	22.5	4.8	0.4	chr5	1209572	1209819	(180328440)	+	(CT)n	Simple_repeat	1	260	(0)	3056044
3591	19.0	1.1	0.3	chr5	1648942	1649692	(179888567)	+	L1MA4A	LINE/L1	5372	6128	(175)	3056489
61	17.7	2.7	3.2	chr5	1649693	1649842	(179888417)	+	(CTTT)n	Simple_repeat	1	154	(0)	3056490
2164	11.2	3.5	1.0	chr5	1649843	1650145	(179888114)	C	AluSx	SINE/Alu	(1)	311	1	3056491
226	34.5	0.8	1.8	chr5	1844480	1845415	(179692844)	+	(TATATC)n	Simple_repeat	1	943	(0)	3056707
47	4.3	0.0	0.0	chr5	2262395	2262443	(179275816)	+	(TC)n	Simple_repeat	1	49	(0)	3057090
82	3.7	0.0	0.0	chr5	3117618	3117700	(178420559)	+	(AG)n	Simple_repeat	1	83	(0)	3058015
1566	16.8	10.2	2.2	chr5	4585944	4586259	(176952000)	+	Tigger3a	DNA/TcMar-Tigger	1	344	(4)	3059553
30	11.3	0.0	0.0	chr5	4586260	4586307	(176951952)	+	(TC)n	Simple_repeat	1	48	(0)	3059554
39	33.2	0.7	1.3	chr5	4586308	4586324	(176951935)	+	(AC)n	Simple_repeat	1	17	(0)	3059555
42	33.4	3.4	0.9	chr5	5876022	5876085	(175662174)	+	(TC)n	Simple_repeat	1	63	(0)	3061105
38	6.1	1.9	1.8	chr5	5876086	5876139	(175662120)	+	(CT)n	Simple_repeat	1	55	(0)	3061106
42	33.4	3.4	0.9	chr5	5876140	5876282	(175661977)	+	(TC)n	Simple_repeat	2	150	(0)	3061107
559	16.3	1.1	0.0	chr5	5876617	5876708	(175661551)	C	MLT2B3	LTR/ERVL	(227)	443	351	3061108
25	22.4	0.0	3.2	chr5	5876723	5876784	(175661475)	+	GA-rich	Low_complexity	1	62	(0)	3061109
596	28.5	1.2	4.8	chr5	5876785	5876803	(175661456)	C	MLT2B3	LTR/ERVL	(367)	350	335	3061108
34	0.0	0.0	0.0	chr5	5876804	5876832	(175661427)	+	(AG)n	Simple_repeat	1	29	(0)	3061110
1288	17.9	0.9	0.9	chr5	5876833	5877052	(175661207)	C	MLT2B3	LTR/ERVL	(334)	336	117	3061108
36	0.0	0.0	0.0	chr5	6435287	6435317	(175102942)	+	(TC)n	Simple_repeat	1	31	(0)	3061858
53	9.0	0.0	3.4	chr5	6531432	6531520	(175006739)	+	(TCTCCT)n	Simple_repeat	1	89	(0)	3061972
61	0.0	0.0	0.0	chr5	6531521	6531572	(175006687)	+	(CT)n	Simple_repeat	1	52	(0)	3061973
27	28.6	0.0	0.0	chr5	7803903	7803969	(173734290)	+	(TA)n	Simple_repeat	1	67	(0)	3063591
40	0.0	0.0	0.0	chr5	7804041	7804074	(173734185)	+	(AG)n	Simple_repeat	1	34	(0)	3063592
2262	14.5	0.0	0.0	chr5	10296903	10297213	(171241046)	+	AluSz	SINE/Alu	1	311	(1)	3066637
1885	26.7	10.8	4.4	chr5	10297214	10297287	(171240972)	C	L2a	LINE/L2	(1495)	1924	1859	3066630
2255	12.1	0.3	0.0	chr5	10297288	10297594	(171240665)	+	AluSq2	SINE/Alu	1	308	(5)	3066638
1749	14.3	5.3	4.3	chr5	10299561	10299860	(171238399)	+	AluJb	SINE/Alu	5	307	(5)	3066642
1219	25.3	9.5	6.4	chr5	10299861	10299992	(171238267)	+	L1ME3Cz	LINE/L1	406	527	(470)	3066641
1911	20.4	5.3	2.2	chr5	10299993	10300444	(171237815)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3066643
2253	11.3	5.0	5.0	chr5	10311664	10311761	(171226498)	C	THE1B	LTR/ERVL-MaLR	(258)	106	1	3066668
868	25.2	7.5	3.5	chr5	10311762	10312185	(171226074)	+	MLT1F1	LTR/ERVL-MaLR	125	569	(0)	3066667
101	22.1	1.4	0.0	chr5	10317303	10317514	(171220745)	+	(CT)n	Simple_repeat	1	215	(0)	3066683
1839	14.3	1.6	4.8	chr5	10317515	10317828	(171220431)	C	AluSz	SINE/Alu	(8)	304	1	3066684
73	0.0	0.0	0.0	chr5	10508736	10508797	(171029462)	+	(AC)n	Simple_repeat	1	62	(0)	3067025
41	6.0	0.0	0.0	chr5	10508798	10508849	(171029410)	+	(TC)n	Simple_repeat	1	52	(0)	3067026
1567	13.9	0.7	11.2	chr5	10544979	10545281	(170992978)	+	AluSx	SINE/Alu	1	271	(41)	3067106
85	3.6	0.0	0.0	chr5	10545282	10545367	(170992892)	+	(CT)n	Simple_repeat	1	86	(0)	3067107
13	27.3	2.8	4.1	chr5	10563895	10563965	(170974294)	+	(AGGCCGG)n	Simple_repeat	1	73	(0)	3067140
2076	16.1	0.3	0.0	chr5	10584265	10584569	(170953690)	+	AluJb	SINE/Alu	2	307	(5)	3067181
616	23.6	14.0	4.3	chr5	10595258	10595605	(170942654)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	1	3067204
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
237	21.7	6.8	0.0	chr5	10607031	10607099	(170931160)	C	Charlie18a	DNA/hAT-Charlie	(139)	203	130	3067226
1010	27.8	4.1	3.0	chr5	10607174	10607536	(170930723)	C	MLT1I	LTR/ERVL-MaLR	(5)	406	40	3067227
859	25.5	5.7	11.1	chr5	10832521	10832890	(170705369)	C	MLT1A	LTR/ERVL-MaLR	(3)	371	23	3067520
1347	25.9	5.0	1.7	chr5	11625293	11625389	(169912870)	+	L1M4	LINE/L1	4850	4951	(1195)	3068556
43	2.5	0.0	0.0	chr5	11625390	11625430	(169912829)	+	(TC)n	Simple_repeat	1	41	(0)	3068557
1347	25.9	5.0	1.7	chr5	11625431	11625854	(169912405)	+	L1M4	LINE/L1	4952	5389	(757)	3068556
322	20.3	9.4	2.3	chr5	12834769	12834920	(168703339)	C	MLT1G	LTR/ERVL-MaLR	(2)	589	367	3070068
108	2.8	1.8	0.0	chr5	12834925	12835036	(168703223)	+	(TC)n	Simple_repeat	1	114	(0)	3070069
715	8.2	0.0	0.0	chr5	12835037	12835133	(168703126)	C	L1P4	LINE/L1	(382)	5781	5685	3070070
1871	8.0	0.4	0.0	chr5	12835135	12835383	(168702876)	C	L1PA6	LINE/L1	(1)	6153	5904	3070071
364	24.0	3.8	2.9	chr5	13921179	13921281	(167616978)	C	LTR85a	LTR/Gypsy?	(0)	702	599	3071471
48	14.8	2.2	1.1	chr5	13921385	13921475	(167616784)	+	(CT)n	Simple_repeat	1	93	(0)	3071472
51	0.0	0.0	0.0	chr5	13921476	13921519	(167616740)	+	(CA)n	Simple_repeat	1	44	(0)	3071473
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
769	29.1	3.0	0.0	chr5	14132220	14132446	(167405813)	+	LTR33	LTR/ERVL	1	234	(281)	3071840
286	27.9	13.8	2.0	chr5	14147165	14147326	(167390933)	C	MIRb	SINE/MIR	(31)	177	10	3071862
5901	21.1	6.9	4.4	chr5	14155184	14156718	(167381541)	C	L1MC4	LINE/L1	(76)	7966	6390	3071872
34	19.8	2.1	12.7	chr5	14157353	14157591	(167380668)	+	(CTCTT)n	Simple_repeat	1	244	(0)	3071873
1803	17.6	1.7	1.0	chr5	14157592	14157887	(167380372)	C	AluJb	SINE/Alu	(14)	298	1	3071874
1838	16.5	1.6	14.2	chr5	14202503	14202919	(167335340)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3071927
1400	12.8	0.0	21.9	chr5	14207495	14207523	(167330736)	+	AluJr4	SINE/Alu	124	135	(177)	3071934
40	0.0	0.0	0.0	chr5	14207524	14207557	(167330702)	+	(AC)n	Simple_repeat	1	34	(0)	3071938
1400	12.8	0.0	21.9	chr5	14207558	14207712	(167330547)	+	AluJr4	SINE/Alu	136	283	(29)	3071934
3254	19.9	5.7	2.4	chr5	14207713	14208558	(167329701)	+	L1ME1	LINE/L1	5194	6047	(132)	3071933
835	20.7	11.5	3.3	chr5	14236695	14236909	(167301350)	C	L1MB8	LINE/L1	(5)	6173	5939	3071981
732	13.1	6.2	0.7	chr5	14511391	14511528	(167026731)	C	L1MD	LINE/L1	(1383)	4763	4618	3072249
62	0.0	0.0	0.0	chr5	14511626	14511678	(167026581)	+	(TC)n	Simple_repeat	1	53	(0)	3072250
464	23.4	4.6	4.0	chr5	14580655	14580805	(166957454)	+	MIR	SINE/MIR	109	260	(2)	3072379
74	6.4	0.0	0.0	chr5	15091325	15091423	(166446836)	+	(CTCTCT)n	Simple_repeat	1	99	(0)	3073149
1857	17.7	0.7	0.0	chr5	15091424	15091689	(166446570)	C	AluJb	SINE/Alu	(39)	273	6	3073150
14	23.2	2.1	2.1	chr5	16616883	16616929	(164921330)	+	(GGC)n	Simple_repeat	1	48	(0)	3075252
2297	10.6	0.7	0.0	chr5	16795908	16796210	(164742049)	+	AluSc8	SINE/Alu	1	305	(6)	3075541
131	14.7	1.6	5.2	chr5	16796212	16796515	(164741744)	+	GA-rich	Low_complexity	1	309	(0)	3075542
484	28.3	6.2	3.2	chr5	16894396	16894552	(164643707)	+	MIR	SINE/MIR	35	196	(66)	3075725
2477	11.3	0.3	5.0	chr5	16909524	16909693	(164628566)	C	THE1B	LTR/ERVL-MaLR	(209)	155	1	3075754
2357	16.3	2.9	0.5	chr5	16909703	16910110	(164628149)	+	MSTB1	LTR/ERVL-MaLR	15	432	(0)	3075756
1039	18.5	1.0	1.4	chr5	16964777	16964984	(164573275)	+	MER45B	DNA/hAT-Tip100	834	1040	(0)	3075895
754	30.6	7.6	0.4	chr5	16977940	16978402	(164559857)	+	HAL1b	LINE/L1	884	1382	(1039)	3075926
47	31.3	1.1	3.3	chr5	16978440	16978620	(164559639)	+	(CTTT)n	Simple_repeat	1	183	(0)	3075930
1051	18.6	0.0	1.7	chr5	16978621	16978797	(164559462)	C	AluJb	SINE/Alu	(6)	306	133	3075931
51	11.3	0.0	0.0	chr5	17217048	17217123	(164321136)	+	(GA)n	Simple_repeat	1	76	(0)	3076465
13	25.7	2.0	2.0	chr5	17217153	17217201	(164321058)	+	G-rich	Low_complexity	1	50	(0)	3076466
30	18.2	0.0	0.0	chr5	17217607	17217664	(164320595)	+	(GGC)n	Simple_repeat	1	58	(0)	3076467
16	20.9	2.9	5.7	chr5	17217831	17217898	(164320361)	+	(GCCCC)n	Simple_repeat	1	70	(0)	3076468
66	3.5	5.8	0.0	chr5	17275941	17276027	(164262232)	+	(TC)n	Simple_repeat	1	92	(0)	3076536
2095	13.7	0.6	1.3	chr5	17308468	17308781	(164229478)	+	AluSx1	SINE/Alu	1	312	(0)	3076599
28	13.4	0.0	1.9	chr5	17308813	17308860	(164229399)	+	(TCTC)n	Simple_repeat	1	48	(0)	3076600
63	2.5	3.4	3.3	chr5	17308861	17308949	(164229310)	+	(TCTT)n	Simple_repeat	1	92	(0)	3076601
1641	14.4	7.2	1.5	chr5	17308954	17309217	(164229042)	C	AluJb	SINE/Alu	(32)	280	1	3076602
1854	13.6	16.0	1.1	chr5	17401487	17401857	(164136402)	+	LTR23	LTR/ERV1	1	437	(0)	3076779
59	3.5	0.0	0.0	chr5	17725330	17725388	(163812871)	+	(AG)n	Simple_repeat	1	59	(0)	3077147
5886	5.8	1.3	1.4	chr5	18800049	18800829	(162737430)	+	LTR17	LTR/ERV1	1	780	(0)	3078522
2632	11.3	8.1	2.0	chr5	18800830	18800955	(162737304)	+	LTR21A	LTR/ERV1	302	455	(26)	3078521
48	4.1	0.0	0.0	chr5	18800956	18801005	(162737254)	+	(TC)n	Simple_repeat	1	50	(0)	3078523
2632	11.3	8.1	2.0	chr5	18801006	18801030	(162737229)	+	LTR21A	LTR/ERV1	456	480	(1)	3078521
1801	30.1	4.7	2.0	chr5	18801033	18801311	(162736948)	C	L1MEc	LINE/L1	(5632)	768	488	3078518
74	2.9	0.0	0.0	chr5	19469172	19469243	(162069016)	+	(GA)n	Simple_repeat	1	72	(0)	3079424
635	20.6	6.2	0.0	chr5	22308650	22308785	(159229474)	C	MLT1D	LTR/ERVL-MaLR	(360)	145	1	3083256
42	4.0	0.0	0.0	chr5	22308804	22308854	(159229405)	+	(AC)n	Simple_repeat	1	51	(0)	3083257
101	3.0	4.4	0.0	chr5	22308854	22308988	(159229271)	+	(AG)n	Simple_repeat	1	141	(0)	3083258
37	4.4	0.0	2.0	chr5	22343284	22343323	(159194936)	+	(AC)n	Simple_repeat	1	40	(0)	3083301
48	0.0	0.0	0.0	chr5	22343324	22343364	(159194895)	+	(AG)n	Simple_repeat	1	41	(0)	3083302
2362	6.1	0.0	0.4	chr5	22343426	22343702	(159194557)	C	AluY	SINE/Alu	(20)	291	16	3083303
50	0.0	0.0	0.0	chr5	23931476	23931518	(157606741)	+	(CT)n	Simple_repeat	1	43	(0)	3085425
62	1.8	0.0	0.0	chr5	24511536	24511592	(157026667)	+	(AG)n	Simple_repeat	1	57	(0)	3086161
49	3.8	1.9	0.0	chr5	26989492	26989545	(154548714)	+	(TC)n	Simple_repeat	1	55	(0)	3089262
57	13.7	2.8	0.9	chr5	30100453	30100558	(151437701)	+	GA-rich	Low_complexity	1	109	(0)	3093224
53	3.6	1.7	0.0	chr5	31703919	31703976	(149834283)	+	(TC)n	Simple_repeat	1	59	(0)	3095401
1803	19.2	2.3	0.7	chr5	31703977	31703989	(149834270)	C	AluJb	SINE/Alu	(9)	303	291	3095402
28	2.8	0.0	5.0	chr5	31703990	31704029	(149834230)	+	(TTCC)n	Simple_repeat	1	40	(0)	3095403
1803	19.2	2.3	0.7	chr5	31704030	31704312	(149833947)	C	AluJb	SINE/Alu	(22)	290	1	3095402
866	27.3	8.9	8.2	chr5	31712185	31712451	(149825808)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	277	3095422
39	6.8	0.0	0.0	chr5	31712452	31712498	(149825761)	+	(CT)n	Simple_repeat	1	47	(0)	3095423
866	27.3	8.9	8.2	chr5	31712499	31712745	(149825514)	C	MLT1H1	LTR/ERVL-MaLR	(279)	276	36	3095422
887	16.5	3.0	4.9	chr5	32193444	32193647	(149344612)	C	L1MB8	LINE/L1	(41)	6137	5938	3096372
12	34.2	0.0	1.7	chr5	32312855	32312914	(149225345)	+	(GCG)n	Simple_repeat	1	60	(0)	3096591
33	2.9	2.8	0.0	chr5	32377209	32377244	(149161015)	+	(TC)n	Simple_repeat	1	37	(0)	3096732
1657	10.6	17.3	0.4	chr5	32377245	32377478	(149160781)	C	AluSc	SINE/Alu	(23)	286	2	3096733
18	3.7	3.6	0.0	chr5	32444238	32444265	(149093994)	+	(GCC)n	Simple_repeat	1	29	(0)	3096861
15	20.0	1.9	7.4	chr5	32444368	32444420	(149093839)	+	GA-rich	Low_complexity	1	54	(0)	3096862
311	28.9	10.0	5.6	chr5	33443141	33443300	(148094959)	+	MIRb	SINE/MIR	16	172	(36)	3098357
59	1.9	0.0	0.0	chr5	33443307	33443361	(148094898)	+	(CT)n	Simple_repeat	1	55	(0)	3098358
2598	4.7	0.0	2.2	chr5	33443477	33443794	(148094465)	C	AluY	SINE/Alu	(0)	311	1	3098359
798	21.6	12.6	3.8	chr5	33490080	33490397	(148047862)	C	LTR29	LTR/ERV1	(46)	576	227	3098441
20	4.2	0.0	0.0	chr5	33490415	33490439	(148047820)	+	(TC)n	Simple_repeat	1	25	(0)	3098442
358	26.0	1.0	3.9	chr5	33490465	33490568	(148047691)	C	LTR29	LTR/ERV1	(385)	237	137	3098441
457	32.3	6.1	2.5	chr5	34048022	34048259	(147490000)	C	MamRep605	LTR?	(146)	703	457	3099277
20	4.2	0.0	0.0	chr5	34048262	34048286	(147489973)	+	(GT)n	Simple_repeat	1	25	(0)	3099278
35	0.0	0.0	0.0	chr5	34048290	34048319	(147489940)	+	(GA)n	Simple_repeat	1	30	(0)	3099279
394	19.2	2.3	1.1	chr5	34048362	34048485	(147489774)	C	LTR50	LTR/ERVL	(0)	795	717	3099280
516	24.7	27.4	2.4	chr5	34048457	34048864	(147489395)	C	LTR50	LTR/ERVL	(184)	611	2	3099280
5319	9.2	1.4	1.2	chr5	34062502	34063274	(147474985)	C	HERV17-int	LTR/ERV1	(7078)	1548	779	3099304
59	9.2	5.2	0.0	chr5	34063275	34063390	(147474869)	+	(TC)n	Simple_repeat	1	122	(0)	3099305
1629	12.7	2.4	4.3	chr5	34063391	34063423	(147474836)	C	HERV17-int	LTR/ERV1	(1306)	4068	4042	3099304
845	24.7	10.0	5.4	chr5	34511985	34512297	(147025962)	+	LTR33	LTR/ERVL	28	356	(159)	3099900
382	17.1	1.3	2.6	chr5	34512322	34512399	(147025860)	+	LTR33	LTR/ERVL	439	515	(0)	3099900
721	8.0	0.0	0.0	chr5	34606598	34606685	(146931574)	+	AluSx3	SINE/Alu	214	301	(10)	3100083
15	0.0	0.0	0.0	chr5	34606703	34606719	(146931540)	+	(CT)n	Simple_repeat	1	17	(0)	3100084
2331	7.1	0.0	0.3	chr5	34606720	34607051	(146931208)	C	AluY	SINE/Alu	(0)	311	1	3100085
2053	11.5	6.6	6.8	chr5	34637831	34638212	(146900047)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3100147
73	0.0	0.0	0.0	chr5	35028559	35028620	(146509639)	+	(GA)n	Simple_repeat	1	62	(0)	3100813
1303	18.0	9.0	21.1	chr5	35647125	35647660	(145890599)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	1	3101693
1925	12.6	3.9	0.4	chr5	35664409	35664678	(145873581)	+	AluSg	SINE/Alu	1	280	(30)	3101720
75	34.2	2.2	1.9	chr5	35664679	35664849	(145873410)	+	A-rich	Low_complexity	145	312	(0)	3101721
57	1.8	1.8	0.0	chr5	36067814	36067870	(145470389)	+	(GA)n	Simple_repeat	1	58	(0)	3102247
31	24.3	3.3	5.8	chr5	36241604	36241754	(145296505)	+	(GCC)n	Simple_repeat	1	156	(0)	3102472
13	13.6	2.9	2.9	chr5	36241802	36241835	(145296424)	+	G-rich	Low_complexity	1	35	(0)	3102473
1513	21.2	7.6	0.8	chr5	36296664	36297029	(145241230)	+	MLT2D	LTR/ERVL	2	394	(20)	3102564
2130	15.0	2.9	2.9	chr5	36297040	36297423	(145240836)	C	Tigger2a	DNA/TcMar-Tigger	(50)	384	1	3102565
2300	12.3	0.0	0.0	chr5	36396860	36397160	(145141099)	+	AluSz	SINE/Alu	1	301	(11)	3102731
273	32.8	3.7	1.5	chr5	36502669	36502801	(145035458)	+	AmnSINE1	SINE/5S-Deu-L2	268	403	(172)	3102913
677	24.9	8.1	7.1	chr5	36641817	36642209	(144896050)	C	Charlie22a	DNA/hAT-Charlie	(85)	406	10	3103134
16	0.0	0.0	0.0	chr5	36739556	36739573	(144798686)	+	(CT)n	Simple_repeat	1	18	(0)	3103269
203	30.5	8.5	0.8	chr5	36739735	36739853	(144798406)	C	L2c	LINE/L2	(85)	3302	3174	3103270
47	0.0	0.0	0.0	chr5	37171746	37171785	(144366474)	+	(CT)n	Simple_repeat	1	40	(0)	3103933
1601	16.2	0.0	8.4	chr5	37171806	37172101	(144366158)	C	AluJr4	SINE/Alu	(31)	281	11	3103934
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
36	2.9	0.0	0.0	chr5	37495443	37495477	(144042782)	+	(TC)n	Simple_repeat	1	35	(0)	3104646
21	4.0	0.0	0.0	chr5	37495478	37495503	(144042756)	+	(GT)n	Simple_repeat	1	26	(0)	3104647
1782	22.8	6.6	7.9	chr5	37499414	37499587	(144038672)	C	L1MD	LINE/L1	(769)	5377	5217	3104653
50	0.0	0.0	2.1	chr5	37499588	37499634	(144038625)	+	(TC)n	Simple_repeat	1	47	(0)	3104655
1278	14.2	6.4	0.5	chr5	37499636	37499840	(144038419)	C	AluJo	SINE/Alu	(82)	230	13	3104656
21	10.5	0.0	0.0	chr5	37857845	37857875	(143680384)	+	(GT)n	Simple_repeat	1	31	(0)	3105139
39	6.4	0.0	0.0	chr5	37857875	37857924	(143680335)	+	(GA)n	Simple_repeat	1	50	(0)	3105140
15	22.6	4.8	0.0	chr5	38556751	38556792	(142981467)	+	(CG)n	Simple_repeat	1	44	(0)	3106292
34	6.5	0.0	3.9	chr5	38607486	38607537	(142930722)	+	(CT)n	Simple_repeat	1	52	(0)	3106385
189	26.2	6.7	1.2	chr5	38607666	38607750	(142930509)	C	MIR3	SINE/MIR	(10)	198	109	3106386
3975	13.1	2.3	2.5	chr5	38660105	38660746	(142877513)	+	LTR9D	LTR/ERV1	5	645	(0)	3106453
204	35.4	3.1	6.8	chr5	38783371	38783542	(142754717)	+	MIR3	SINE/MIR	2	159	(49)	3106667
130	2.4	6.4	0.6	chr5	38832047	38832217	(142706042)	+	(CT)n	Simple_repeat	1	182	(0)	3106749
135	6.3	0.0	1.2	chr5	39499549	39499719	(142038540)	+	(TCTT)n	Simple_repeat	1	171	(0)	3107640
1829	17.1	0.0	1.1	chr5	39499720	39500000	(142038259)	C	AluJb	SINE/Alu	(29)	283	6	3107641
1502	22.9	5.4	6.2	chr5	40785654	40785839	(140752420)	+	MLT1C	LTR/ERVL-MaLR	11	203	(264)	3109412
47	0.0	0.0	0.0	chr5	40785840	40785879	(140752380)	+	(AG)n	Simple_repeat	1	40	(0)	3109413
1502	22.9	5.4	6.2	chr5	40785880	40785972	(140752287)	+	MLT1C	LTR/ERVL-MaLR	204	286	(181)	3109412
2366	9.7	0.0	0.0	chr5	40785973	40786270	(140751989)	+	AluSx	SINE/Alu	1	298	(14)	3109414
413	36.9	10.9	3.5	chr5	41746580	41747380	(139790879)	+	L2c	LINE/L2	2259	3123	(264)	3110783
194	33.3	10.4	0.0	chr5	41747412	41747480	(139790779)	C	L2c	LINE/L2	(13)	3362	3286	3110784
255	25.7	16.8	6.4	chr5	41747541	41747773	(139790486)	C	L2c	LINE/L2	(196)	3191	2930	3110784
9231	12.6	7.2	1.6	chr5	41832097	41832333	(139705926)	+	L1M1	LINE/L1	1522	1755	(5810)	3110893
36	0.0	0.0	0.0	chr5	41832334	41832364	(139705895)	+	(AG)n	Simple_repeat	1	31	(0)	3110894
11529	12.1	6.5	2.1	chr5	41832365	41833777	(139704482)	+	L1M1	LINE/L1	1756	3272	(4293)	3110893
12	12.0	13.3	0.0	chr5	43065259	43065303	(138472956)	+	A-rich	Low_complexity	1	51	(0)	3112478
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
17	4.9	0.0	0.0	chr5	43422186	43422206	(138116053)	+	(AG)n	Simple_repeat	1	21	(0)	3113081
14432	14.2	2.0	3.8	chr5	43571513	43574022	(137964237)	C	LTR49-int	LTR/ERV1	(87)	6244	3774	3113279
9636	7.8	1.3	1.0	chr5	44111869	44113155	(137425104)	+	HERV17-int	LTR/ERV1	1	1291	(7335)	3113899
31	5.5	0.0	0.0	chr5	50429823	50429860	(131108399)	+	(ATTC)n	Simple_repeat	1	38	(0)	3116499
12	20.6	9.3	4.3	chr5	50429874	50429959	(131108300)	+	(TTCTCC)n	Simple_repeat	1	94	(0)	3116500
47	2.3	0.0	0.0	chr5	50429962	50430006	(131108253)	+	(CT)n	Simple_repeat	1	45	(0)	3116501
26	8.9	0.0	0.0	chr5	50430007	50430042	(131108217)	+	(AC)n	Simple_repeat	1	36	(0)	3116502
48	10.1	1.3	1.3	chr5	50707589	50707664	(130830595)	+	(GA)n	Simple_repeat	1	77	(0)	3116841
35	5.4	0.0	0.0	chr5	50839653	50839691	(130698568)	+	(TC)n	Simple_repeat	1	39	(0)	3117008
862	23.6	2.5	1.5	chr5	52834220	52834417	(128703842)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	191	3119477
122	26.9	1.6	0.0	chr5	52834426	52834738	(128703521)	+	GA-rich	Low_complexity	1	318	(0)	3119478
643	22.2	6.5	1.2	chr5	52834751	52834910	(128703349)	C	MLT1B	LTR/ERVL-MaLR	(217)	173	5	3119477
314	27.5	8.4	0.0	chr5	52856433	52856541	(128681718)	C	L3	LINE/CR1	(6)	4093	3975	3119506
40	2.6	0.0	0.0	chr5	52856675	52856713	(128681546)	+	(AG)n	Simple_repeat	1	39	(0)	3119507
918	28.6	12.6	4.4	chr5	52856746	52857195	(128681064)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	58	3119508
1202	23.3	1.4	10.8	chr5	53162039	53162447	(128375812)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	3119911
2398	10.3	0.3	0.0	chr5	53443476	53443787	(128094472)	C	AluSp	SINE/Alu	(0)	313	1	3120273
30	22.9	2.1	3.0	chr5	53480685	53480781	(128057478)	+	(GCGCCCC)n	Simple_repeat	1	99	(0)	3120333
74	21.4	3.1	3.4	chr5	53482169	53482333	(128055926)	+	(TTTC)n	Simple_repeat	1	209	(25)	3120336
2605	20.3	7.0	2.9	chr5	53516116	53516145	(128022114)	C	MLT1E3	LTR/ERVL-MaLR	(595)	29	1	3120376
27	10.8	0.0	0.0	chr5	53516274	53516313	(128021946)	+	(CT)n	Simple_repeat	1	40	(0)	3120378
35	12.9	0.0	0.0	chr5	53970465	53970523	(127567736)	+	(AGAGAG)n	Simple_repeat	1	59	(0)	3120999
1272	25.0	12.5	3.9	chr5	54208435	54209335	(127328924)	+	HAL1	LINE/L1	1384	2365	(142)	3121365
20	25.9	2.8	2.7	chr5	54209336	54209407	(127328852)	+	GA-rich	Low_complexity	1	74	(0)	3121367
272	31.9	0.0	2.6	chr5	54209415	54209530	(127328729)	+	HAL1	LINE/L1	2395	2507	(0)	3121365
18	0.0	0.0	0.0	chr5	54249673	54249692	(127288567)	+	(A)n	Simple_repeat	1	20	(0)	3121423
2379	15.3	3.7	1.0	chr5	54249951	54250366	(127287893)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3121424
533	31.8	4.8	2.9	chr5	54302288	54302491	(127235768)	+	MIRb	SINE/MIR	31	238	(30)	3121515
26	8.8	0.0	0.0	chr5	54895696	54895731	(126642528)	+	(TC)n	Simple_repeat	1	36	(0)	3122410
1005	14.2	1.4	0.0	chr5	54895732	54895872	(126642387)	C	AluJr4	SINE/Alu	(6)	306	164	3122411
45	4.3	6.8	1.3	chr5	54947348	54947421	(126590838)	+	(TC)n	Simple_repeat	1	79	(0)	3122491
2128	14.3	0.0	0.0	chr5	55491586	55491885	(126046374)	+	AluSz	SINE/Alu	11	310	(2)	3123314
13	25.5	2.8	5.4	chr5	55491886	55491958	(126046301)	+	A-rich	Low_complexity	1	71	(0)	3123315
442	27.8	9.5	1.8	chr5	55593187	55593351	(125944908)	+	LTR88c	LTR/Gypsy?	1	179	(683)	3123525
7180	7.4	1.5	2.1	chr5	55615008	55616028	(125922231)	+	HERV9-int	LTR/ERV1	4161	5175	(3261)	3123572
4872	8.7	0.9	2.4	chr5	55616038	55616804	(125921455)	+	HERV9N-int	LTR/ERV1	3986	4741	(633)	3123573
2719	21.4	3.1	1.9	chr5	55729031	55729189	(125809070)	C	L1MC4	LINE/L1	(2)	8040	7906	3123778
35	0.0	0.0	0.0	chr5	55729190	55729219	(125809040)	+	(TC)n	Simple_repeat	1	30	(0)	3123780
2719	20.5	3.3	2.1	chr5	55729220	55729702	(125808557)	C	L1MC4	LINE/L1	(137)	7905	7405	3123778
204	20.3	0.0	3.9	chr5	55993286	55993339	(125544920)	+	MIRb	SINE/MIR	24	71	(197)	3124228
37	0.0	0.0	0.0	chr5	56058300	56058331	(125479928)	+	(GA)n	Simple_repeat	1	32	(0)	3124368
47	11.1	3.8	0.0	chr5	56359474	56359552	(125178707)	+	(AG)n	Simple_repeat	1	82	(0)	3124925
22	21.4	3.2	6.2	chr5	56359553	56359564	(125178695)	+	GA-rich	Low_complexity	4	97	(0)	3124926
276	33.9	12.6	5.8	chr5	56517688	56518532	(125019727)	+	L2	LINE/L2	1691	2601	(818)	3125158
38	6.9	0.0	0.0	chr5	56518540	56518585	(125019674)	+	(CT)n	Simple_repeat	1	46	(0)	3125159
74	0.0	1.4	1.4	chr5	57374714	57374784	(124163475)	+	(AG)n	Simple_repeat	1	72	(0)	3126685
1369	18.1	6.7	12.8	chr5	57899781	57899824	(123638435)	+	MLT1A	LTR/ERVL-MaLR	159	187	(187)	3127403
41	4.7	0.0	0.0	chr5	57899825	57899868	(123638391)	+	(CT)n	Simple_repeat	1	44	(0)	3127405
1369	18.1	6.7	12.8	chr5	57899869	57900054	(123638205)	+	MLT1A	LTR/ERVL-MaLR	188	373	(1)	3127403
523	36.8	4.0	6.3	chr5	58174402	58174718	(123363541)	+	L2b	LINE/L2	2481	2795	(624)	3127754
36	0.0	0.0	0.0	chr5	58174719	58174749	(123363510)	+	(TC)n	Simple_repeat	1	31	(0)	3127755
1758	18.5	0.4	0.7	chr5	58174750	58175030	(123363229)	C	AluJb	SINE/Alu	(28)	284	5	3127756
13	16.5	0.0	0.0	chr5	58934065	58934091	(122604168)	+	(GTG)n	Simple_repeat	1	27	(0)	3128823
30	5.5	2.6	0.0	chr5	58934226	58934263	(122603996)	+	(CT)n	Simple_repeat	1	39	(0)	3128824
21	3.6	0.0	0.0	chr5	59124967	59124995	(122413264)	+	(TTTCT)n	Simple_repeat	1	29	(0)	3129089
21	4.0	0.0	0.0	chr5	59126108	59126133	(122412126)	+	(AG)n	Simple_repeat	1	26	(0)	3129090
40	21.7	1.0	2.0	chr5	59126134	59126196	(122412063)	+	A-rich	Low_complexity	14	100	(0)	3129091
14	11.6	3.5	0.0	chr5	59127406	59127434	(122410825)	+	(TTTC)n	Simple_repeat	1	30	(0)	3129092
17	8.6	5.1	2.4	chr5	59127601	59127639	(122410620)	+	(CCCCACC)n	Simple_repeat	1	41	(0)	3129093
23750	8.3	0.9	0.7	chr5	59302384	59306532	(122231727)	C	L1PB1	LINE/L1	(4)	6863	2681	3129342
342	27.7	7.0	0.6	chr5	59317408	59317567	(122220692)	C	MamGypsy2-LTR	LTR/Gypsy	(7)	176	6	3129346
200	34.3	4.3	0.0	chr5	59322044	59322110	(122216149)	+	MIR3	SINE/MIR	54	123	(85)	3129353
22	20.4	4.2	2.7	chr5	59380380	59380451	(122157808)	+	A-rich	Low_complexity	1	75	(0)	3129428
30	3.5	0.0	0.0	chr5	59597515	59597544	(121940715)	+	(GA)n	Simple_repeat	1	30	(0)	3129709
44	0.0	0.0	2.4	chr5	59751575	59751616	(121786643)	+	(GT)n	Simple_repeat	1	42	(0)	3129916
17	13.7	5.0	0.0	chr5	59751618	59751657	(121786602)	+	(GAGC)n	Simple_repeat	1	42	(0)	3129917
297	30.1	5.0	1.7	chr5	59751857	59751971	(121786288)	+	MIRb	SINE/MIR	115	233	(35)	3129918
30	5.5	0.0	0.0	chr5	60677289	60677326	(120860933)	+	(CA)n	Simple_repeat	1	38	(0)	3131164
43	0.0	0.0	0.0	chr5	60677327	60677363	(120860896)	+	(CT)n	Simple_repeat	1	37	(0)	3131165
232	32.9	13.2	4.0	chr5	61037785	61038037	(120500222)	C	L2c	LINE/L2	(556)	2863	2584	3131683
13	15.2	0.0	3.2	chr5	61038058	61038088	(120500171)	+	GA-rich	Low_complexity	1	31	(0)	3131685
40	2.6	0.0	0.0	chr5	61038089	61038127	(120500132)	+	(AG)n	Simple_repeat	1	39	(0)	3131686
2055	13.2	4.1	0.3	chr5	61164019	61164344	(120373915)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3131861
216	10.5	2.6	5.0	chr5	61468029	61468068	(120070191)	C	L2c	LINE/L2	(12)	3375	3337	3132313
604	26.7	8.0	4.2	chr5	61468035	61468249	(120070010)	C	MIRb	SINE/MIR	(15)	253	30	3132314
25	0.0	0.0	0.0	chr5	61660541	61660568	(119877691)	+	(TG)n	Simple_repeat	1	28	(0)	3132604
57	5.8	0.0	0.0	chr5	61660568	61660639	(119877620)	+	(GA)n	Simple_repeat	1	72	(0)	3132605
250	17.0	4.8	0.8	chr5	61731271	61731834	(119806425)	+	GA-rich	Low_complexity	1	591	(0)	3132721
1817	16.0	0.4	0.0	chr5	62738282	62738544	(118799715)	+	AluJr	SINE/Alu	1	264	(48)	3134303
48	0.0	0.0	0.0	chr5	62738545	62738585	(118799674)	+	(AG)n	Simple_repeat	1	41	(0)	3134304
1695	16.2	1.7	4.0	chr5	62738714	62738869	(118799390)	C	AluJr	SINE/Alu	(23)	289	134	3134305
2292	11.5	0.3	0.3	chr5	64682946	64683258	(116855001)	+	AluSp	SINE/Alu	1	313	(0)	3136771
115	14.6	1.7	3.3	chr5	64683259	64683494	(116854765)	+	A-rich	Low_complexity	1	240	(0)	3136772
63	0.0	0.0	0.0	chr5	64776069	64776122	(116762137)	+	(GA)n	Simple_repeat	1	54	(0)	3136895
43001	4.6	1.1	1.1	chr5	65174290	65179688	(116358571)	+	Harlequin-int	LTR/ERV1	1	5400	(1496)	3137462
29	29.1	0.0	0.0	chr5	65332288	65332312	(116205947)	+	(TA)n	Simple_repeat	1	25	(0)	3137683
33	0.0	0.0	0.0	chr5	65332313	65332340	(116205919)	+	(AG)n	Simple_repeat	1	28	(0)	3137684
29	29.1	0.0	0.0	chr5	65332341	65332396	(116205863)	+	(TA)n	Simple_repeat	2	57	(0)	3137685
12	12.8	5.6	2.6	chr5	65480646	65480681	(116057578)	+	(CCTCACT)n	Simple_repeat	1	38	(0)	3137886
21	18.5	1.3	7.6	chr5	65722126	65722203	(115816056)	+	G-rich	Low_complexity	1	79	(0)	3138300
2491	6.1	4.2	0.0	chr5	65885644	65885938	(115652321)	C	AluYk4	SINE/Alu	(1)	310	3	3138604
74	5.1	0.0	0.0	chr5	65886001	65886081	(115652178)	+	(TC)n	Simple_repeat	1	81	(0)	3138605
183	30.8	0.0	1.9	chr5	65886091	65886143	(115652116)	+	MIRb	SINE/MIR	213	264	(4)	3138606
57	0.0	0.0	0.0	chr5	66907159	66907207	(114631052)	+	(GA)n	Simple_repeat	1	49	(0)	3140099
2787	13.6	3.5	0.0	chr5	66907208	66907479	(114630780)	C	MER61B	LTR/ERV1	(146)	281	2	3140098
238	17.2	0.0	1.6	chr5	66957999	66958060	(114580199)	+	MIR3	SINE/MIR	111	172	(36)	3140181
16	5.2	0.0	0.0	chr5	66958101	66958120	(114580139)	+	(CT)n	Simple_repeat	1	20	(0)	3140182
16	5.3	0.0	0.0	chr5	66958122	66958141	(114580118)	+	(TG)n	Simple_repeat	1	20	(0)	3140183
28	10.0	0.0	0.0	chr5	66958141	66958184	(114580075)	+	(GAAAGA)n	Simple_repeat	1	44	(0)	3140184
299	35.4	0.7	0.0	chr5	66981699	66981842	(114556417)	C	L4_C_Mam	LINE/RTE-X	(1458)	3680	3536	3140215
1967	16.0	0.0	1.6	chr5	67075162	67075474	(114462785)	C	AluJb	SINE/Alu	(3)	309	2	3140338
44	4.5	0.0	0.0	chr5	67345052	67345098	(114193161)	+	(TC)n	Simple_repeat	1	47	(0)	3140691
2031	16.7	0.7	0.0	chr5	67345100	67345404	(114192855)	C	AluSx	SINE/Alu	(5)	307	1	3140692
939	23.7	3.3	7.9	chr5	67452224	67452539	(114085720)	C	L1MD2	LINE/L1	(9)	6350	6050	3140848
2232	19.5	7.1	4.5	chr5	67877894	67878329	(113659930)	+	MLT2B1	LTR/ERVL	1	454	(66)	3141353
37	0.0	0.0	0.0	chr5	67878330	67878361	(113659898)	+	(TC)n	Simple_repeat	1	32	(0)	3141354
673	25.5	12.3	6.6	chr5	68360199	68360707	(113177552)	+	L1MEg	LINE/L1	1693	2040	(5293)	3142134
43	0.0	0.0	0.0	chr5	68360786	68360822	(113177437)	+	(AG)n	Simple_repeat	1	37	(0)	3142135
2810	24.4	9.2	3.6	chr5	68360824	68362315	(113175944)	+	L1MEg	LINE/L1	2468	4068	(3169)	3142134
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
1160	11.3	4.0	0.0	chr5	69334610	69334777	(112203482)	+	AluSx1	SINE/Alu	113	287	(25)	3143802
44	5.7	0.0	0.0	chr5	69334794	69334849	(112203410)	+	(GA)n	Simple_repeat	1	56	(0)	3143803
275	31.9	7.1	4.0	chr5	69359609	69359758	(112178501)	+	MARNA	DNA/TcMar-Mariner	22	176	(410)	3143864
278	33.3	0.8	4.0	chr5	69500010	69500134	(112038125)	C	L3	LINE/CR1	(783)	3316	3196	3144194
901	23.9	9.2	3.4	chr5	69521162	69521486	(112016773)	C	L1ME3G	LINE/L1	(246)	678	333	3144235
933	14.7	1.9	2.5	chr5	69521488	69521644	(112016615)	+	AluJo	SINE/Alu	134	289	(23)	3144236
1971	16.0	0.0	0.3	chr5	70036305	70036591	(111501668)	+	AluJb	SINE/Alu	1	286	(26)	3145074
42	0.0	0.0	0.0	chr5	70036595	70036630	(111501629)	+	(AC)n	Simple_repeat	1	36	(0)	3145075
31	0.0	0.0	0.0	chr5	70036631	70036664	(111501595)	+	(TC)n	Simple_repeat	1	34	(0)	3145076
519	19.5	0.8	6.3	chr5	71344065	71344175	(110194084)	+	MLT1A	LTR/ERVL-MaLR	1	107	(267)	3147324
46	7.0	0.0	1.6	chr5	71344176	71344237	(110194022)	+	(TC)n	Simple_repeat	1	62	(0)	3147325
519	19.5	0.8	6.3	chr5	71344238	71344251	(110194008)	+	MLT1A	LTR/ERVL-MaLR	108	119	(255)	3147324
581	20.7	4.8	5.4	chr5	71344252	71344399	(110193860)	+	MLT1A	LTR/ERVL-MaLR	228	374	(0)	3147324
2889	19.7	6.9	2.5	chr5	71385939	71386594	(110151665)	C	L1MA8	LINE/L1	(10)	6281	5593	3147377
27	10.8	0.0	0.0	chr5	71542491	71542530	(109995729)	+	(TC)n	Simple_repeat	1	40	(0)	3147635
249	17.9	16.4	1.8	chr5	71542533	71542589	(109995670)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(1)	1067	1001	3147636
628	12.2	16.2	0.0	chr5	71542590	71542687	(109995572)	+	AluJo	SINE/Alu	1	117	(195)	3147637
41	10.3	4.1	0.0	chr5	71862613	71862685	(109675574)	+	(GAGAGA)n	Simple_repeat	1	76	(0)	3148166
49	18.0	4.5	2.2	chr5	71925769	71925825	(109612434)	+	GA-rich	Low_complexity	1	57	(0)	3148246
45	2.4	0.0	0.0	chr5	71925826	71925868	(109612391)	+	(AC)n	Simple_repeat	1	43	(0)	3148247
49	18.4	3.6	1.3	chr5	71925869	71925949	(109612310)	+	GA-rich	Low_complexity	1	82	(0)	3148248
42	31.1	0.6	2.5	chr5	72205554	72205710	(109332549)	+	GA-rich	Low_complexity	1	158	(0)	3148630
365	15.5	9.0	0.0	chr5	72247096	72247166	(109291093)	C	MER102c	DNA/hAT-Charlie	(3)	328	251	3148680
38	0.0	0.0	0.0	chr5	72531758	72531790	(109006469)	+	(TC)n	Simple_repeat	1	33	(0)	3149122
338	24.5	18.2	3.0	chr5	72648104	72648372	(108889887)	C	L1ME4a	LINE/L1	(0)	6124	5806	3149291
1016	30.1	2.4	6.9	chr5	72651434	72651880	(108886379)	+	MLT1K	LTR/ERVL-MaLR	8	433	(162)	3149297
409	26.0	5.2	0.0	chr5	72651943	72652069	(108886190)	+	MER91B	DNA/hAT-Tip100	55	188	(2)	3149298
53	0.0	0.0	0.0	chr5	72720777	72720821	(108817438)	+	(CT)n	Simple_repeat	1	45	(0)	3149425
1026	28.3	9.2	7.5	chr5	72790032	72790630	(108747629)	C	LTR104_Mam	LTR/Gypsy	(838)	671	62	3149520
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
180	25.0	0.0	5.9	chr5	73034066	73034116	(108504143)	+	MIR3	SINE/MIR	38	85	(123)	3149893
389	26.1	9.4	5.0	chr5	73034126	73034246	(108504013)	C	L2a	LINE/L2	(0)	3426	3300	3149894
62	1.8	0.0	0.0	chr5	73216929	73216985	(108321274)	+	(TC)n	Simple_repeat	1	57	(0)	3150177
1773	15.2	4.2	0.0	chr5	73217009	73217278	(108320981)	C	AluJb	SINE/Alu	(30)	282	1	3150178
30	3.4	0.0	0.0	chr5	73435292	73435321	(108102938)	+	(AG)n	Simple_repeat	1	30	(0)	3150474
21	21.1	0.0	0.0	chr5	73448242	73448300	(108089959)	+	(CGTCCT)n	Simple_repeat	1	59	(0)	3150486
858	19.4	4.8	0.0	chr5	73486027	73486214	(108052045)	C	AluJb	SINE/Alu	(0)	312	129	3150558
74	14.3	0.6	5.0	chr5	73486218	73486376	(108051883)	+	(TTTC)n	Simple_repeat	1	160	(0)	3150559
498	20.6	8.9	0.0	chr5	73486377	73486478	(108051781)	C	AluJb	SINE/Alu	(177)	125	14	3150558
29	15.3	5.1	0.0	chr5	73699369	73699427	(107838832)	+	GA-rich	Low_complexity	1	62	(0)	3150941
222	28.1	5.0	5.0	chr5	73964399	73964499	(107573760)	+	L3b	LINE/CR1	5132	5232	(0)	3151294
57	1.9	0.0	0.0	chr5	73964515	73964567	(107573692)	+	(AG)n	Simple_repeat	1	53	(0)	3151295
1684	16.3	11.2	0.6	chr5	74011057	74011239	(107527020)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	171	3151367
46	0.0	0.0	0.0	chr5	74011240	74011278	(107526981)	+	(AG)n	Simple_repeat	1	39	(0)	3151368
1684	16.3	11.2	0.6	chr5	74011279	74011428	(107526831)	C	MLT1A	LTR/ERVL-MaLR	(204)	170	2	3151367
994	25.3	5.1	11.0	chr5	74205642	74206058	(107332201)	+	MLT1A1	LTR/ERVL-MaLR	5	395	(13)	3151639
38	2.8	0.0	0.0	chr5	74661012	74661048	(106877211)	+	(GA)n	Simple_repeat	1	37	(0)	3152305
600	26.6	8.4	10.9	chr5	74818532	74818770	(106719489)	+	L1ME1	LINE/L1	5849	6083	(96)	3152552
40	0.0	0.0	0.0	chr5	74818771	74818804	(106719455)	+	(CT)n	Simple_repeat	1	34	(0)	3152553
600	26.6	8.4	10.9	chr5	74818805	74818893	(106719366)	+	L1ME1	LINE/L1	6084	6168	(11)	3152552
3532	17.0	8.1	5.7	chr5	74818909	74818937	(106719322)	+	L1MB7	LINE/L1	5304	5324	(860)	3152550
51	3.9	0.0	0.0	chr5	75081685	75081737	(106456522)	+	(AG)n	Simple_repeat	1	53	(0)	3153052
15	4.7	4.5	0.0	chr5	75081760	75081781	(106456478)	+	(GA)n	Simple_repeat	1	23	(0)	3153053
4426	2.5	0.4	0.0	chr5	75610836	75611347	(105926912)	C	SVA_A	Retroposon/SVA	(0)	1387	874	3153810
65	12.8	6.1	0.0	chr5	76082501	76082632	(105455627)	+	(TCTCTC)n	Simple_repeat	1	140	(0)	3154462
1838	15.8	1.0	0.7	chr5	76595478	76595768	(104942491)	+	AluJr	SINE/Alu	1	292	(20)	3155284
36	0.0	0.0	0.0	chr5	76595769	76595799	(104942460)	+	(AG)n	Simple_repeat	1	31	(0)	3155285
29	3.0	0.0	0.0	chr5	76610043	76610076	(104928183)	+	(TC)n	Simple_repeat	1	34	(0)	3155301
3138	15.8	5.4	1.6	chr5	76698858	76699501	(104838758)	C	L1MA7	LINE/L1	(0)	6291	5622	3155422
170	15.5	1.6	3.7	chr5	76699596	76699964	(104838295)	+	(TC)n	Simple_repeat	1	375	(0)	3155423
3454	15.7	10.5	1.0	chr5	76781365	76782000	(104756259)	+	MER41-int	LTR/ERV1	1	606	(5340)	3155594
31	3.3	0.0	0.0	chr5	76782002	76782032	(104756227)	+	(CT)n	Simple_repeat	1	31	(0)	3155595
358	25.0	10.5	1.5	chr5	77154990	77155119	(104383140)	C	Charlie8	DNA/hAT-Charlie	(2162)	266	124	3156287
31	12.2	3.7	0.0	chr5	77155122	77155175	(104383084)	+	(CT)n	Simple_repeat	1	56	(0)	3156288
17	15.8	2.2	4.3	chr5	77492451	77492496	(104045763)	+	(GCG)n	Simple_repeat	1	47	(0)	3156732
701	21.5	4.4	0.0	chr5	77813901	77814072	(103724187)	C	L1M5	LINE/L1	(426)	5698	5519	3157215
28	0.0	0.0	0.0	chr5	77814177	77814206	(103724053)	+	(TC)n	Simple_repeat	1	30	(0)	3157216
50	0.0	0.0	0.0	chr5	77814207	77814249	(103724010)	+	(TG)n	Simple_repeat	1	43	(0)	3157217
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
13	18.6	4.3	4.1	chr5	78648763	78648809	(102889450)	+	GA-rich	Low_complexity	1	49	(0)	3158378
20	18.8	3.6	1.7	chr5	78984876	78984931	(102553328)	+	(GCG)n	Simple_repeat	1	58	(0)	3158884
419	14.1	0.0	0.0	chr5	79241643	79241713	(102296546)	C	Tigger1	DNA/TcMar-Tigger	(60)	2358	2288	3159404
390	9.9	0.0	7.8	chr5	79392850	79392926	(102145333)	+	Tigger3c	DNA/TcMar-Tigger	329	399	(203)	3159661
43	0.0	2.5	0.0	chr5	79392955	79392994	(102145265)	+	(GA)n	Simple_repeat	1	41	(0)	3159662
641	17.3	2.3	0.8	chr5	79392996	79393123	(102145136)	+	L1MC4	LINE/L1	7913	8042	(0)	3159663
31	21.7	0.0	0.0	chr5	79612336	79612399	(101925860)	+	G-rich	Low_complexity	1	64	(0)	3160094
32	12.6	6.3	0.0	chr5	79747025	79747087	(101791172)	+	(TC)n	Simple_repeat	1	67	(0)	3160309
47	2.3	0.0	0.0	chr5	79952400	79952444	(101585815)	+	(CT)n	Simple_repeat	1	45	(0)	3160611
1688	9.6	14.6	0.0	chr5	80197067	80197306	(101340953)	+	AluSx1	SINE/Alu	1	281	(31)	3161035
66	0.0	0.0	0.0	chr5	80197309	80197364	(101340895)	+	(GA)n	Simple_repeat	1	56	(0)	3161036
2620	17.9	3.0	9.1	chr5	80197365	80197501	(101340758)	+	L1MB7	LINE/L1	5879	6015	(169)	3161033
2014	19.8	8.4	6.5	chr5	80516846	80517384	(101020875)	+	MER44B	DNA/TcMar-Tigger	1	550	(0)	3161726
1522	13.4	13.5	0.0	chr5	80925462	80925536	(100612723)	+	MER44A	DNA/TcMar-Tigger	1	112	(227)	3162414
44	0.0	0.0	0.0	chr5	80925537	80925574	(100612685)	+	(GA)n	Simple_repeat	1	38	(0)	3162415
1522	13.4	13.5	0.0	chr5	80925575	80925773	(100612486)	+	MER44A	DNA/TcMar-Tigger	113	317	(22)	3162414
2063	13.0	5.2	1.4	chr5	80938402	80938767	(100599492)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3162440
53	3.8	0.0	0.0	chr5	80957846	80957899	(100580360)	+	(AG)n	Simple_repeat	1	54	(0)	3162480
14	9.1	0.0	0.0	chr5	80957913	80957936	(100580323)	+	(GAAA)n	Simple_repeat	1	24	(0)	3162481
2074	12.2	5.0	2.2	chr5	81542635	81542817	(99995442)	+	THE1D	LTR/ERVL-MaLR	1	187	(194)	3163305
42	0.0	0.0	0.0	chr5	81542818	81542853	(99995406)	+	(TC)n	Simple_repeat	1	36	(0)	3163306
2398	9.7	0.0	0.0	chr5	81542855	81543154	(99995105)	C	AluSx	SINE/Alu	(12)	300	1	3163307
1393	16.5	12.9	0.0	chr5	81757849	81758091	(99780168)	+	AluJo	SINE/Alu	1	279	(33)	3163568
40	2.6	0.0	0.0	chr5	81758093	81758131	(99780128)	+	(GA)n	Simple_repeat	1	39	(0)	3163569
12	13.0	0.0	3.6	chr5	81758135	81758162	(99780097)	+	GA-rich	Low_complexity	1	28	(0)	3163570
255	18.6	6.3	0.0	chr5	81758171	81758229	(99780030)	C	MADE2	DNA/TcMar-Mariner	(14)	66	4	3163571
679	12.1	5.9	4.3	chr5	81948878	81948993	(99589266)	+	AluJr	SINE/Alu	1	118	(194)	3163903
34	7.0	0.0	0.0	chr5	81948997	81949041	(99589218)	+	(AG)n	Simple_repeat	1	45	(0)	3163904
1228	32.3	9.2	3.1	chr5	81949166	81949967	(99588292)	+	ERVL-int	LTR/ERVL	4076	4931	(826)	3163902
505	30.8	4.7	0.0	chr5	82447317	82447498	(99090761)	+	MIRb	SINE/MIR	7	197	(71)	3164651
37	9.5	0.0	0.0	chr5	82447499	82447554	(99090705)	+	(GAGA)n	Simple_repeat	1	56	(0)	3164652
926	25.1	4.2	0.5	chr5	82447555	82447790	(99090469)	+	MIR	SINE/MIR	6	241	(21)	3164653
1376	16.3	1.3	3.9	chr5	82532746	82533059	(99005200)	C	THE1B	LTR/ERVL-MaLR	(91)	290	1	3164773
1391	22.0	3.5	4.8	chr5	82576471	82576680	(98961579)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	173	3164821
39	2.7	0.0	0.0	chr5	82576681	82576718	(98961541)	+	(GA)n	Simple_repeat	1	38	(0)	3164822
1391	22.0	3.5	4.8	chr5	82576719	82576884	(98961375)	C	MLT1A	LTR/ERVL-MaLR	(202)	172	2	3164821
40	0.0	0.0	0.0	chr5	82661950	82661983	(98876276)	+	(AG)n	Simple_repeat	1	34	(0)	3164931
648	28.7	13.7	0.4	chr5	82662055	82662320	(98875939)	+	L2a	LINE/L2	3120	3426	(0)	3164932
53	7.2	2.7	0.0	chr5	82713965	82714039	(98824220)	+	(TC)n	Simple_repeat	1	77	(0)	3165002
1010	17.6	0.0	0.0	chr5	82714049	82714196	(98824063)	C	AluJb	SINE/Alu	(34)	278	131	3165003
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
283	29.9	7.3	5.9	chr5	84270638	84270772	(97267487)	C	MIR	SINE/MIR	(31)	231	95	3167019
69	23.4	0.0	0.7	chr5	84371302	84371450	(97166809)	+	(AT)n	Simple_repeat	1	149	(0)	3167166
47	2.3	0.0	0.0	chr5	84371451	84371495	(97166764)	+	(AG)n	Simple_repeat	1	45	(0)	3167167
36	18.7	5.8	0.0	chr5	84384961	84385047	(97153212)	+	(TC)n	Simple_repeat	1	92	(0)	3167187
63	1.6	0.0	3.0	chr5	84445217	84445283	(97092976)	+	(AG)n	Simple_repeat	1	67	(0)	3167276
2138	10.3	0.7	0.0	chr5	85352515	85352786	(96185473)	+	AluSp	SINE/Alu	1	274	(39)	3168436
42	7.8	0.0	0.0	chr5	85352787	85352840	(96185419)	+	(CT)n	Simple_repeat	1	54	(0)	3168437
20	4.1	0.0	0.0	chr5	85352846	85352870	(96185389)	+	(TG)n	Simple_repeat	1	25	(0)	3168438
187	15.2	0.0	0.0	chr5	85352908	85352940	(96185319)	C	MIR	SINE/MIR	(10)	252	220	3168439
21	25.3	1.6	0.0	chr5	85669703	85669722	(95868537)	+	(TTTC)n	Simple_repeat	1	61	(0)	3168783
23	17.0	0.0	0.0	chr5	85669723	85669762	(95868497)	+	(CT)n	Simple_repeat	1	40	(0)	3168784
17	14.7	0.0	3.1	chr5	85669917	85669948	(95868311)	+	GA-rich	Low_complexity	1	32	(0)	3168785
53	2.0	0.0	0.0	chr5	86630714	86630763	(94907496)	+	(AG)n	Simple_repeat	1	50	(0)	3170049
354	13.3	0.0	0.0	chr5	86630764	86630808	(94907451)	C	AluYj4	SINE/Alu	(39)	272	228	3170050
273	16.4	8.9	3.2	chr5	86630767	86630829	(94907430)	+	SVA_E	Retroposon/SVA	329	395	(987)	3170051
1056	28.9	11.8	6.1	chr5	86630846	86631276	(94906983)	C	L2a	LINE/L2	(271)	3155	2647	3170052
186	38.0	7.6	0.0	chr5	86987436	86987556	(94550703)	C	MIR1_Amn	SINE/MIR	(77)	153	23	3170502
42	18.1	1.2	0.0	chr5	86987578	86987658	(94550601)	+	(TC)n	Simple_repeat	1	82	(0)	3170503
78	6.6	2.6	0.9	chr5	88029162	88029274	(93508985)	+	(TC)n	Simple_repeat	1	116	(0)	3171802
1956	30.1	13.4	6.7	chr5	88099863	88100440	(93437819)	C	HAL1	LINE/L1	(611)	1896	1210	3171872
41	2.5	0.0	0.0	chr5	88100441	88100480	(93437779)	+	(TC)n	Simple_repeat	1	40	(0)	3171873
1851	16.6	0.4	0.0	chr5	88100482	88100759	(93437500)	C	AluJb	SINE/Alu	(33)	279	1	3171874
6976	12.5	0.7	2.9	chr5	88243086	88245091	(93293168)	C	L1PA15	LINE/L1	(6)	6159	4199	3172063
9714	16.1	9.2	7.0	chr5	88248111	88250171	(93288088)	C	HERV35I-int	LTR/ERV1	(3728)	3190	1124	3172065
40	4.9	0.0	0.0	chr5	88250172	88250214	(93288045)	+	(AG)n	Simple_repeat	1	43	(0)	3172066
9714	16.1	9.2	7.0	chr5	88250215	88250398	(93287861)	C	HERV35I-int	LTR/ERV1	(5795)	1123	891	3172065
21	18.4	4.9	4.7	chr5	88269143	88269223	(93269036)	+	G-rich	Low_complexity	1	85	(0)	3172087
46	0.0	0.0	0.0	chr5	88684765	88684803	(92853456)	+	(TC)n	Simple_repeat	1	39	(0)	3172665
39	6.7	0.0	0.0	chr5	88839322	88839368	(92698891)	+	(TC)n	Simple_repeat	1	47	(0)	3172849
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
64	1.7	0.0	0.0	chr5	88954011	88954069	(92584190)	+	(CT)n	Simple_repeat	1	59	(0)	3172972
325	23.9	15.0	4.3	chr5	89032964	89033103	(92505156)	C	MLT1O	LTR/ERVL-MaLR	(18)	524	370	3173064
60	3.4	0.0	0.0	chr5	89033104	89033163	(92505096)	+	(TC)n	Simple_repeat	1	60	(0)	3173065
325	23.9	15.0	4.3	chr5	89033164	89033206	(92505053)	C	MLT1O	LTR/ERVL-MaLR	(173)	369	318	3173064
711	31.6	5.2	2.9	chr5	89978736	89978891	(91559368)	+	LTR85a	LTR/Gypsy?	276	429	(273)	3174196
53	2.0	0.0	0.0	chr5	89978892	89978941	(91559318)	+	(GA)n	Simple_repeat	1	50	(0)	3174197
711	31.6	5.2	2.9	chr5	89978942	89979201	(91559058)	+	LTR85a	LTR/Gypsy?	430	701	(1)	3174196
1198	20.2	12.6	0.6	chr5	90133794	90133963	(91404296)	+	MLT1B	LTR/ERVL-MaLR	1	197	(193)	3174374
56	4.7	1.4	1.4	chr5	90133964	90134032	(91404227)	+	(TC)n	Simple_repeat	1	70	(0)	3174375
1198	20.2	12.6	0.6	chr5	90134033	90134204	(91404055)	+	MLT1B	LTR/ERVL-MaLR	198	389	(1)	3174374
20	4.1	0.0	0.0	chr5	90909632	90909656	(90628603)	+	(AG)n	Simple_repeat	1	25	(0)	3175368
267	23.0	5.1	1.3	chr5	90909718	90909792	(90628467)	+	Charlie7	DNA/hAT-Charlie	1	78	(2534)	3175369
683	33.5	18.4	2.6	chr5	91038130	91038632	(90499627)	C	L2c	LINE/L2	(272)	3103	2520	3175537
1904	21.4	9.7	8.4	chr5	91181345	91181905	(90356354)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	3175748
1537	19.5	1.1	1.1	chr5	91341941	91342212	(90196047)	+	AluJo	SINE/Alu	2	273	(39)	3176100
31	3.3	0.0	0.0	chr5	91342218	91342248	(90196011)	+	(TC)n	Simple_repeat	1	31	(0)	3176101
951	16.4	5.2	0.0	chr5	91342249	91342394	(90195865)	C	AluSx1	SINE/Alu	(26)	286	133	3176102
22	2.8	2.4	7.0	chr5	91380210	91380251	(90158008)	+	(CCG)n	Simple_repeat	1	43	(0)	3176168
19	17.6	4.2	5.4	chr5	91383444	91383452	(90154807)	+	(GCGCC)n	Simple_repeat	25	74	(0)	3176169
39	2.7	0.0	0.0	chr5	91418173	91418210	(90120049)	+	(CT)n	Simple_repeat	1	38	(0)	3176231
49	22.6	1.9	4.9	chr5	92445234	92445393	(89092866)	+	GA-rich	Low_complexity	1	163	(0)	3177471
24	19.6	0.0	0.0	chr5	92445468	92445514	(89092745)	+	(TA)n	Simple_repeat	1	47	(0)	3177472
181	20.6	2.9	0.0	chr5	92641190	92641223	(88897036)	C	LFSINE_Vert	SINE/tRNA	(272)	187	153	3177698
29	6.3	0.0	0.0	chr5	92642691	92642724	(88895535)	+	(TC)n	Simple_repeat	1	34	(0)	3177700
17	20.5	0.0	0.0	chr5	92802020	92802053	(88736206)	+	A-rich	Low_complexity	1	34	(0)	3177909
24	15.4	0.0	2.2	chr5	93402060	93402104	(88136155)	+	GA-rich	Low_complexity	1	45	(0)	3178644
295	30.4	21.4	3.7	chr5	93426470	93426660	(88111599)	+	MIRb	SINE/MIR	14	247	(21)	3178675
217	25.0	4.0	2.7	chr5	93426674	93426747	(88111512)	+	MamTip2	DNA/hAT-Tip100	176	250	(55)	3178676
25	14.8	3.8	0.0	chr5	93427906	93427958	(88110301)	+	GA-rich	Low_complexity	1	55	(0)	3178678
44	10.3	1.4	0.0	chr5	93440147	93440219	(88098040)	+	(TC)n	Simple_repeat	1	74	(0)	3178690
17	4.3	0.0	3.7	chr5	93440220	93440236	(88098023)	+	(CA)n	Simple_repeat	1	17	(0)	3178691
1664	21.4	11.5	5.6	chr5	93440243	93440723	(88097536)	+	MLT2B1	LTR/ERVL	8	520	(0)	3178692
17	10.8	0.0	0.0	chr5	93532394	93532423	(88005836)	+	(AGAG)n	Simple_repeat	1	30	(0)	3178777
43	0.0	0.0	0.0	chr5	93606252	93606288	(87931971)	+	(AC)n	Simple_repeat	1	37	(0)	3178856
11	24.6	0.0	2.5	chr5	93715409	93715448	(87822811)	+	(TGCACTT)n	Simple_repeat	1	40	(0)	3178994
16	13.2	0.0	0.0	chr5	94470260	94470284	(87067975)	+	(A)n	Simple_repeat	1	25	(0)	3179865
41	16.3	0.9	6.1	chr5	94564876	94564974	(86973285)	+	(TTTCT)n	Simple_repeat	1	93	(0)	3179997
66	6.8	5.5	0.0	chr5	94564975	94565083	(86973176)	+	(TC)n	Simple_repeat	1	115	(0)	3179998
41	16.3	0.9	6.1	chr5	94565084	94565098	(86973161)	+	(TTTCT)n	Simple_repeat	1	16	(0)	3179999
817	17.9	0.7	0.0	chr5	94565099	94565232	(86973027)	C	FLAM_C	SINE/Alu	(8)	135	1	3180000
57	1.9	0.0	0.0	chr5	94947578	94947630	(86590629)	+	(AG)n	Simple_repeat	1	53	(0)	3180472
1600	16.1	0.8	2.9	chr5	94947638	94947910	(86590349)	C	AluJo	SINE/Alu	(34)	278	12	3180473
98	4.8	0.0	0.0	chr5	95207929	95208037	(86330222)	+	(GAGAGAGAGG)n	Simple_repeat	1	109	(0)	3180825
13	0.0	0.0	0.0	chr5	95208087	95208103	(86330156)	+	(TGT)n	Simple_repeat	1	17	(0)	3180826
2165	11.8	0.0	0.3	chr5	95208104	95208390	(86329869)	C	AluSq2	SINE/Alu	(27)	286	1	3180827
23	11.7	0.0	2.6	chr5	95228471	95228509	(86309750)	+	(AG)n	Simple_repeat	1	39	(0)	3180847
2822	10.9	1.9	1.4	chr5	95228596	95229021	(86309238)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3180848
60	0.0	1.8	0.0	chr5	95359522	95359576	(86178683)	+	(GA)n	Simple_repeat	1	56	(0)	3181056
717	19.8	1.9	0.0	chr5	95359644	95359800	(86178459)	+	MER5A	DNA/hAT-Charlie	29	188	(1)	3181057
746	20.3	6.3	1.1	chr5	95407848	95408104	(86130155)	C	MLT1F1	LTR/ERVL-MaLR	(6)	585	177	3181115
13	18.6	0.0	2.9	chr5	95408105	95408138	(86130121)	+	G-rich	Low_complexity	1	34	(0)	3181116
229	34.5	5.8	4.4	chr5	95408244	95408516	(86129743)	C	Tigger15a	DNA/TcMar-Tigger	(247)	468	192	3181117
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
797	27.9	4.3	0.0	chr5	95931134	95931355	(85606904)	+	MIR	SINE/MIR	21	252	(10)	3181878
411	29.3	5.7	1.7	chr5	96150023	96150140	(85388119)	C	L2b	LINE/L2	(10)	3365	3243	3182200
420	28.4	7.4	10.1	chr5	96150155	96150542	(85387717)	+	LTR78	LTR/ERV1	1	377	(927)	3182201
29	0.0	0.0	0.0	chr5	96263603	96263627	(85274632)	+	(AG)n	Simple_repeat	1	25	(0)	3182344
473	25.0	12.4	1.9	chr5	96263628	96263675	(85274584)	+	hAT-N1_Mam	DNA/hAT-Tip100?	93	142	(198)	3182345
2021	12.4	4.7	3.2	chr5	96263676	96264050	(85274209)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3182346
63	1.8	0.0	0.0	chr5	96328374	96328431	(85209828)	+	(TC)n	Simple_repeat	1	58	(0)	3182422
37	8.5	0.0	0.0	chr5	96625261	96625310	(84912949)	+	(TC)n	Simple_repeat	1	50	(0)	3182848
18	20.1	2.2	0.0	chr5	96663721	96663766	(84874493)	+	GA-rich	Low_complexity	1	47	(0)	3182911
323	23.2	2.3	9.4	chr5	96672041	96672178	(84866081)	+	L1MC5	LINE/L1	9010	9137	(167)	3182930
31	3.3	0.0	0.0	chr5	96672218	96672248	(84866011)	+	(TC)n	Simple_repeat	1	31	(0)	3182931
469	18.0	0.9	5.7	chr5	96672276	96672420	(84865839)	+	L1ME2z	LINE/L1	6326	6443	(1)	3182932
507	23.3	8.1	4.1	chr5	96745944	96746168	(84792091)	C	MIRc	SINE/MIR	(24)	244	5	3183052
2381	10.3	0.6	0.3	chr5	96856038	96856348	(84681911)	+	AluSx1	SINE/Alu	1	312	(0)	3183216
35	0.0	0.0	0.0	chr5	96856366	96856395	(84681864)	+	(AG)n	Simple_repeat	1	30	(0)	3183217
324	37.7	2.7	4.0	chr5	96876827	96876950	(84661309)	+	MIR3	SINE/MIR	4	127	(141)	3183252
2189	12.0	0.0	0.0	chr5	96876951	96877274	(84660985)	C	AluSx	SINE/Alu	(0)	312	1	3183253
34	0.0	0.0	0.0	chr5	97614840	97614876	(83923383)	+	(TG)n	Simple_repeat	1	37	(0)	3184179
62	3.3	0.0	0.0	chr5	97614877	97614938	(83923321)	+	(GA)n	Simple_repeat	1	62	(0)	3184180
537	10.4	0.0	12.4	chr5	98770684	98770804	(82767455)	+	MER50	LTR/ERV1	499	604	(130)	3185539
14	21.5	7.6	1.4	chr5	98773829	98773866	(82764393)	+	(CGCTGCG)n	Simple_repeat	1	80	(25)	3185540
14	17.2	3.9	5.7	chr5	98773867	98773917	(82764342)	+	(GCT)n	Simple_repeat	1	53	(0)	3185541
14	21.5	7.6	1.4	chr5	98773918	98773927	(82764332)	+	(CGCTGCG)n	Simple_repeat	81	105	(0)	3185540
17	30.2	1.2	2.5	chr5	98773973	98774052	(82764207)	+	(GCCCGC)n	Simple_repeat	1	81	(0)	3185542
1913	15.2	1.7	1.0	chr5	98975038	98975326	(82562933)	+	AluJb	SINE/Alu	4	294	(18)	3185851
46	0.0	2.3	0.0	chr5	98975333	98975375	(82562884)	+	(GA)n	Simple_repeat	1	44	(0)	3185852
2101	13.8	4.7	10.2	chr5	98975376	98975777	(82562482)	C	MSTB	LTR/ERVL-MaLR	(32)	394	1	3185850
323	27.2	6.7	0.0	chr5	98988549	98988673	(82549586)	+	L2	LINE/L2	2557	2690	(729)	3185877
79	0.0	0.0	0.0	chr5	98988692	98988758	(82549501)	+	(TC)n	Simple_repeat	1	67	(0)	3185878
625	17.7	0.0	0.0	chr5	98988759	98988854	(82549405)	C	AluJb	SINE/Alu	(27)	285	190	3185879
1901	14.8	5.7	2.4	chr5	98988860	98989196	(82549063)	+	L1PB4	LINE/L1	4967	5303	(843)	3185880
29	23.6	0.0	1.3	chr5	99617069	99617144	(81921115)	+	(TCTCTC)n	Simple_repeat	1	76	(0)	3186693
2058	15.1	0.0	1.0	chr5	99617204	99617508	(81920751)	+	AluSx	SINE/Alu	6	307	(5)	3186694
1675	19.6	1.0	2.4	chr5	99680241	99680525	(81857734)	+	AluJb	SINE/Alu	1	280	(32)	3186775
39	2.7	0.0	0.0	chr5	99680526	99680563	(81857696)	+	(GA)n	Simple_repeat	1	38	(0)	3186776
1675	19.6	1.0	2.4	chr5	99680564	99680574	(81857685)	+	AluJb	SINE/Alu	282	292	(20)	3186775
3363	26.2	14.0	5.0	chr5	99680575	99682318	(81855941)	+	L1ME2	LINE/L1	1319	3276	(3043)	3186774
2700	30.9	7.6	2.1	chr5	99900253	99901357	(81636902)	C	ERVL-E-int	LTR/ERVL	(1258)	4396	3162	3187045
1016	20.9	5.5	3.7	chr5	100544080	100544294	(80993965)	+	AluJr	SINE/Alu	1	219	(93)	3187883
46	13.3	3.6	0.0	chr5	100544409	100544491	(80993768)	+	GA-rich	Low_complexity	1	86	(0)	3187884
84	7.9	1.6	0.0	chr5	100678204	100678325	(80859934)	+	(GAGA)n	Simple_repeat	1	124	(0)	3188070
60	5.5	0.0	0.0	chr5	101080343	101080417	(80457842)	+	(AG)n	Simple_repeat	1	75	(0)	3188509
39	16.3	3.9	0.0	chr5	101680376	101680453	(79857806)	+	(TC)n	Simple_repeat	1	81	(0)	3189193
1801	13.5	5.4	0.8	chr5	101680460	101680726	(79857533)	C	AluSz6	SINE/Alu	(32)	280	1	3189194
670	27.3	15.4	2.3	chr5	101755459	101756044	(79782215)	+	LTR68	LTR/ERV1	1	740	(0)	3189301
366	25.2	15.6	1.9	chr5	102836691	102836844	(78701415)	C	L2a	LINE/L2	(2)	3424	3246	3190635
46	0.0	0.0	0.0	chr5	102836860	102836898	(78701361)	+	(GA)n	Simple_repeat	1	39	(0)	3190636
15	33.0	0.0	1.8	chr5	103259272	103259326	(78278933)	+	(GC)n	Simple_repeat	1	55	(0)	3191198
13	27.9	0.0	0.0	chr5	103259393	103259435	(78278824)	+	(GCTC)n	Simple_repeat	1	43	(0)	3191199
266	33.6	13.9	5.5	chr5	103334874	103335130	(78203129)	C	L2c	LINE/L2	(1006)	2413	2133	3191298
78	3.9	0.0	0.0	chr5	103335131	103335210	(78203049)	+	(GA)n	Simple_repeat	1	80	(0)	3191300
266	33.6	13.9	5.5	chr5	103335211	103335898	(78202361)	C	L2c	LINE/L2	(1287)	2132	1377	3191298
8733	23.0	8.4	2.7	chr5	103368162	103370152	(78168107)	C	L1M4b	LINE/L1	(4625)	2242	158	3191347
736	29.1	6.0	2.5	chr5	103956015	103956257	(77582002)	C	MER45C	DNA/hAT-Tip100	(688)	265	14	3192152
71	11.8	3.3	0.0	chr5	103956259	103956378	(77581881)	+	GA-rich	Low_complexity	1	124	(0)	3192153
1452	14.6	0.9	0.0	chr5	106460860	106461072	(75077187)	+	AluSx4	SINE/Alu	79	293	(17)	3195159
63	20.4	0.8	0.0	chr5	106461074	106461123	(75077136)	+	GA-rich	Low_complexity	1	51	(0)	3195160
61	0.0	0.0	0.0	chr5	106461124	106461178	(75077081)	+	(AGGA)n	Simple_repeat	1	55	(0)	3195161
63	20.4	0.8	0.0	chr5	106461179	106461261	(75076998)	+	GA-rich	Low_complexity	52	134	(0)	3195162
12	17.5	3.1	0.0	chr5	106991921	106991952	(74546307)	+	GA-rich	Low_complexity	1	33	(0)	3195802
34	3.0	0.0	0.0	chr5	106991953	106991986	(74546273)	+	(GA)n	Simple_repeat	1	34	(0)	3195803
73	4.1	0.0	0.0	chr5	107482796	107482871	(74055388)	+	(CT)n	Simple_repeat	1	76	(0)	3196399
29	24.5	0.0	0.0	chr5	107482872	107482933	(74055326)	+	(AT)n	Simple_repeat	1	62	(0)	3196400
298	23.4	0.0	0.0	chr5	107486773	107486836	(74051423)	+	MLT1I	LTR/ERVL-MaLR	348	411	(0)	3196406
667	22.5	4.7	0.0	chr5	107505884	107506025	(74032234)	C	MIR	SINE/MIR	(112)	150	2	3196429
18	0.0	4.5	0.0	chr5	107571027	107571048	(73967211)	+	(CT)n	Simple_repeat	1	23	(0)	3196521
29	2.7	2.5	2.4	chr5	107617205	107617237	(73921022)	+	(CA)n	Simple_repeat	1	33	(0)	3196567
38	2.8	0.0	0.0	chr5	107617238	107617274	(73920985)	+	(AG)n	Simple_repeat	1	37	(0)	3196568
282	33.6	5.1	5.1	chr5	107617337	107617474	(73920785)	C	L2a	LINE/L2	(3)	3423	3286	3196569
14	9.3	0.0	0.0	chr5	107672098	107672120	(73866139)	+	(GCA)n	Simple_repeat	1	23	(0)	3196632
85	3.6	0.0	0.0	chr5	110108664	110108749	(71429510)	+	(GA)n	Simple_repeat	1	86	(0)	3199889
1065	26.9	2.0	1.6	chr5	110620400	110620577	(70917682)	+	MER90a	LTR/ERV1	361	540	(74)	3200438
112	0.9	3.5	0.0	chr5	110620578	110620691	(70917568)	+	(TC)n	Simple_repeat	1	118	(0)	3200439
1065	26.9	2.0	1.6	chr5	110620692	110620765	(70917494)	+	MER90a	LTR/ERV1	541	614	(0)	3200438
24	15.1	0.0	5.3	chr5	111224406	111224462	(70313797)	+	(GGC)n	Simple_repeat	1	57	(0)	3201163
35	0.0	0.0	0.0	chr5	111406195	111406224	(70132035)	+	(TC)n	Simple_repeat	1	30	(0)	3201389
2254	10.7	0.0	1.0	chr5	111406226	111406523	(70131736)	C	AluSq2	SINE/Alu	(18)	295	1	3201390
72	1.5	0.0	0.0	chr5	111531937	111532002	(70006257)	+	(CT)n	Simple_repeat	1	66	(0)	3201567
31	0.0	0.0	0.0	chr5	111532006	111532032	(70006227)	+	(TA)n	Simple_repeat	1	27	(0)	3201568
2381	10.7	1.3	0.0	chr5	111532034	111532341	(70005918)	C	AluSx	SINE/Alu	(0)	312	1	3201569
28	15.6	4.2	4.7	chr5	111757232	111757305	(69780954)	+	G-rich	Low_complexity	1	73	(0)	3201825
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
46401	5.2	1.2	0.1	chr5	112444459	112450410	(69087849)	+	HERV17-int	LTR/ERV1	1	6017	(2609)	3202771
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
400	34.3	11.1	1.1	chr5	113166784	113167131	(68371128)	+	L3b	LINE/CR1	4844	5230	(2)	3203916
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
6200	18.1	4.9	7.9	chr5	113787553	113787722	(67750537)	C	LTR39-int	LTR/ERV1	(4463)	4581	4412	3204757
77	2.6	1.3	0.0	chr5	113787723	113787800	(67750459)	+	(AG)n	Simple_repeat	1	79	(0)	3204759
39	15.3	2.5	0.6	chr5	115522931	115523018	(66015241)	+	GA-rich	Low_complexity	1	89	(0)	3206918
497	13.8	1.0	0.0	chr5	116050456	116050562	(65487697)	+	L1PA16	LINE/L1	5519	5628	(538)	3207652
351	25.5	1.8	1.8	chr5	116050650	116050761	(65487498)	C	LTR82A	LTR/ERVL	(655)	217	106	3207653
41	0.0	0.0	0.0	chr5	116050781	116050815	(65487444)	+	(TC)n	Simple_repeat	1	35	(0)	3207654
37	5.1	0.0	0.0	chr5	116050817	116050857	(65487402)	+	(AC)n	Simple_repeat	1	41	(0)	3207655
255	10.8	0.0	0.0	chr5	116327391	116327427	(65210832)	+	L1MEc	LINE/L1	531	567	(5941)	3207987
941	27.0	7.2	10.3	chr5	116327420	116327571	(65210688)	+	L1MEc	LINE/L1	1728	1835	(4582)	3207987
47	4.3	0.0	0.0	chr5	116327572	116327620	(65210639)	+	(CT)n	Simple_repeat	1	49	(0)	3207988
1107	25.4	8.2	2.5	chr5	116327621	116328128	(65210131)	+	L1MEc	LINE/L1	1836	2368	(4034)	3207987
2109	3.8	0.7	0.7	chr5	116766890	116767158	(64771101)	+	L1PA5	LINE/L1	5886	6154	(0)	3208580
761	22.2	5.8	8.0	chr5	118926932	118927294	(62610965)	C	MLT1A1	LTR/ERVL-MaLR	(65)	343	3	3211503
273	25.8	10.2	1.2	chr5	119063529	119063650	(62474609)	C	MLT1O	LTR/ERVL-MaLR	(308)	287	76	3211769
350	28.1	14.3	3.2	chr5	119063651	119063860	(62474399)	+	MIR	SINE/MIR	20	267	(1)	3211770
666	16.5	0.0	0.0	chr5	119270431	119270547	(62267712)	C	FLAM_C	SINE/Alu	(90)	212	22	3212079
26790	3.8	0.6	1.5	chr5	119294045	119300263	(62237996)	C	L1PA3	LINE/L1	(0)	6155	1	3212120
230	32.1	6.8	4.9	chr5	119329088	119329231	(62209028)	+	MIR3	SINE/MIR	59	205	(3)	3212179
7985	11.5	3.9	3.0	chr5	119437486	119439169	(62099090)	+	HERVIP10FH-int	LTR/ERV1	479	1987	(3115)	3212315
38	0.0	0.0	0.0	chr5	120384859	120384891	(61153368)	+	(TC)n	Simple_repeat	1	33	(0)	3213452
2052	13.7	0.0	5.3	chr5	120385033	120385353	(61152906)	C	AluSx1	SINE/Alu	(8)	304	1	3213453
335	16.2	0.2	0.0	chr5	121705047	121705612	(59832647)	+	GA-rich	Low_complexity	1	567	(0)	3215033
38	2.8	0.0	0.0	chr5	122234878	122234914	(59303345)	+	(GA)n	Simple_repeat	1	37	(0)	3215678
286	30.6	3.3	0.7	chr5	122333292	122333439	(59204820)	+	UCON29	DNA/PiggyBac?	1	152	(287)	3215768
30	18.5	0.0	0.0	chr5	122392381	122392441	(59145818)	+	(TCTC)n	Simple_repeat	1	61	(0)	3215839
31	0.0	0.0	0.0	chr5	122574950	122574983	(58963276)	+	(CA)n	Simple_repeat	1	34	(0)	3216082
43	2.5	0.0	0.0	chr5	122574984	122575024	(58963235)	+	(CT)n	Simple_repeat	1	41	(0)	3216083
300	26.2	9.4	7.5	chr5	123037431	123037764	(58500495)	+	L1ME4a	LINE/L1	5771	6111	(13)	3216855
40	18.3	4.5	1.7	chr5	123089023	123089029	(58449230)	+	(TCCCTC)n	Simple_repeat	1	43	(64)	3216921
14	14.8	2.4	4.8	chr5	123089030	123089070	(58449189)	+	(TCCCC)n	Simple_repeat	1	42	(0)	3216922
40	18.3	4.5	1.7	chr5	123089071	123089077	(58449182)	+	(TCCCTC)n	Simple_repeat	44	107	(0)	3216921
48	1.8	0.0	0.0	chr5	123089078	123089126	(58449133)	+	(TC)n	Simple_repeat	1	49	(0)	3216923
76	0.0	0.0	0.0	chr5	123089127	123089191	(58449068)	+	(CA)n	Simple_repeat	1	65	(0)	3216924
30	0.0	0.0	0.0	chr5	123094433	123094458	(58443801)	+	(TC)n	Simple_repeat	1	26	(0)	3216927
34	0.0	0.0	0.0	chr5	123147280	123147308	(58390951)	+	(AG)n	Simple_repeat	1	29	(0)	3216985
26	17.8	3.1	1.5	chr5	123512385	123512449	(58025810)	+	(CTCG)n	Simple_repeat	1	67	(0)	3217484
18	19.0	2.7	0.0	chr5	123810123	123810159	(57728100)	+	(CT)n	Simple_repeat	1	38	(0)	3217873
181	25.0	0.0	2.2	chr5	123882987	123883031	(57655228)	C	L3	LINE/CR1	(3184)	915	872	3217947
5218	17.0	2.2	1.7	chr5	123963987	123964368	(57573891)	C	L1MC1	LINE/L1	(665)	5668	5286	3218049
84	19.5	1.2	0.0	chr5	123964383	123964552	(57573707)	+	(CTCT)n	Simple_repeat	1	172	(0)	3218051
1045	14.6	0.0	0.0	chr5	123964575	123964718	(57573541)	C	AluJb	SINE/Alu	(82)	230	87	3218052
28	28.9	1.2	0.0	chr5	124088773	124088853	(57449406)	+	GA-rich	Low_complexity	1	82	(0)	3218194
1693	17.5	0.3	5.7	chr5	124275462	124275776	(57262483)	+	AluJr	SINE/Alu	1	298	(14)	3218452
30	15.0	3.2	1.6	chr5	124275777	124275825	(57262434)	+	GA-rich	Low_complexity	14	63	(0)	3218453
405	29.1	6.1	11.5	chr5	124628479	124628757	(56909502)	+	MLT1O	LTR/ERVL-MaLR	280	542	(0)	3218901
2386	10.3	0.0	2.0	chr5	124664894	124665195	(56873064)	+	AluSx3	SINE/Alu	1	296	(15)	3218937
598	25.0	0.0	4.0	chr5	124665198	124665347	(56872912)	+	MER63B	DNA/hAT-Blackjack	293	436	(0)	3218938
1924	22.4	7.0	6.7	chr5	124682829	124683384	(56854875)	+	MLT1F2	LTR/ERVL-MaLR	1	558	(2)	3218966
15	5.5	0.0	0.0	chr5	124733200	124733218	(56805041)	+	(TC)n	Simple_repeat	1	19	(0)	3219037
22	7.2	0.0	0.0	chr5	124733218	124733246	(56805013)	+	(T)n	Simple_repeat	1	29	(0)	3219038
15	18.5	0.0	6.1	chr5	124735404	124735452	(56802807)	+	(GCCCAGG)n	Simple_repeat	1	49	(0)	3219039
19	8.1	0.0	0.0	chr5	124747158	124747183	(56791076)	+	(T)n	Simple_repeat	1	26	(0)	3219049
30	0.0	0.0	0.0	chr5	124795791	124795816	(56742443)	+	(TC)n	Simple_repeat	1	26	(0)	3219155
21	7.6	0.0	0.0	chr5	125046868	125046895	(56491364)	+	(GA)n	Simple_repeat	1	28	(0)	3219549
285	28.5	10.1	0.7	chr5	125047007	125047158	(56491101)	+	MamGypLTR2c	LTR/Gypsy	426	593	(475)	3219550
65	6.7	0.0	0.0	chr5	125196104	125196181	(56342078)	+	(TC)n	Simple_repeat	1	78	(0)	3219742
36	0.0	0.0	0.0	chr5	125196182	125196221	(56342038)	+	(AC)n	Simple_repeat	1	40	(0)	3219743
34	5.5	0.0	0.0	chr5	125251851	125251888	(56286371)	+	(TC)n	Simple_repeat	1	38	(0)	3219810
18	18.5	0.0	2.6	chr5	125374819	125374857	(56163402)	+	(TG)n	Simple_repeat	1	39	(0)	3219972
32	4.9	2.3	0.0	chr5	125374857	125374899	(56163360)	+	(GA)n	Simple_repeat	1	44	(0)	3219973
1366	28.7	5.9	4.9	chr5	125393555	125394108	(56144151)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3220006
1168	18.9	10.2	1.4	chr5	125426853	125427137	(56111122)	C	L2	LINE/L2	(536)	2883	2571	3220049
226	26.2	0.0	0.0	chr5	125427146	125427187	(56111072)	+	MER63D	DNA/hAT-Blackjack	7	48	(1013)	3220050
18	0.0	0.0	0.0	chr5	125427280	125427299	(56110960)	+	(CT)n	Simple_repeat	1	20	(0)	3220051
12307	14.6	1.8	0.3	chr5	125427334	125429311	(56108948)	+	Tigger2	DNA/TcMar-Tigger	2	2010	(708)	3220052
33	0.0	0.0	0.0	chr5	125507979	125508006	(56030253)	+	(TG)n	Simple_repeat	1	28	(0)	3220132
30	7.7	0.0	0.0	chr5	125508007	125508047	(56030212)	+	(AG)n	Simple_repeat	1	41	(0)	3220133
964	16.8	15.4	1.6	chr5	125555714	125555977	(55982282)	+	L1PB1	LINE/L1	5829	6166	(0)	3220187
915	30.8	4.9	4.0	chr5	126012868	126013290	(55524969)	+	L2	LINE/L2	1368	1794	(1625)	3220675
808	26.3	11.1	5.2	chr5	126013324	126013364	(55524895)	+	L2a	LINE/L2	1675	1715	(1704)	3220676
48	0.0	0.0	0.0	chr5	126013365	126013405	(55524854)	+	(CT)n	Simple_repeat	1	41	(0)	3220677
808	26.3	11.1	5.2	chr5	126013406	126013744	(55524515)	+	L2a	LINE/L2	1716	2080	(1339)	3220676
184	30.1	0.0	9.8	chr5	126055308	126055399	(55482860)	+	AmnSINE2	SINE/tRNA-Deu	149	231	(127)	3220728
20147	20.1	7.2	4.8	chr5	126068188	126070552	(55467707)	+	L1MD2	LINE/L1	2328	3545	(4020)	3220745
2100	11.9	9.8	6.8	chr5	126419121	126419534	(55118725)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3221150
2503	8.6	0.0	0.6	chr5	126663962	126664274	(54873985)	C	AluSx1	SINE/Alu	(0)	312	2	3221662
45	3.4	0.0	5.9	chr5	126664276	126664343	(54873916)	+	(TTCT)n	Simple_repeat	1	68	(0)	3221663
41	9.5	0.0	0.0	chr5	126664344	126664400	(54873859)	+	(CT)n	Simple_repeat	1	57	(0)	3221664
17	0.0	0.0	3.9	chr5	126664399	126664424	(54873835)	+	(TCCT)n	Simple_repeat	1	26	(0)	3221665
17	12.5	0.0	0.0	chr5	126778227	126778260	(54759999)	+	(GC)n	Simple_repeat	1	34	(0)	3221961
256	35.5	1.8	0.0	chr5	127850207	127850313	(53687946)	+	MER91A	DNA/hAT-Tip100	36	144	(52)	3223359
2617	12.1	1.6	0.7	chr5	127925895	127926319	(53611940)	C	MER57A1	LTR/ERV1	(3)	429	1	3223485
20	20.7	1.7	3.3	chr5	128083672	128083730	(53454529)	+	(GCC)n	Simple_repeat	1	60	(0)	3223723
12	22.9	2.3	2.3	chr5	128083748	128083790	(53454469)	+	(GCCC)n	Simple_repeat	1	44	(0)	3223724
13	9.7	5.7	2.7	chr5	128237566	128237600	(53300659)	+	(TGTTATC)n	Simple_repeat	1	37	(0)	3223906
36	5.3	0.0	0.0	chr5	128340797	128340836	(53197423)	+	(CT)n	Simple_repeat	1	40	(0)	3224025
21	12.1	0.0	7.5	chr5	128434585	128434637	(53103622)	+	(TCCCTC)n	Simple_repeat	1	53	(0)	3224139
1537	22.8	0.0	0.0	chr5	128479655	128479926	(53058333)	+	AluJr	SINE/Alu	11	282	(30)	3224192
42	0.0	0.0	0.0	chr5	128479931	128479976	(53058283)	+	(TC)n	Simple_repeat	1	46	(0)	3224193
58	1.9	0.0	0.0	chr5	128479977	128480030	(53058229)	+	(TA)n	Simple_repeat	1	54	(0)	3224194
25	11.5	0.0	0.0	chr5	129507647	129507684	(52030575)	+	(TG)n	Simple_repeat	1	38	(0)	3225421
43	25.0	0.9	0.0	chr5	129507686	129507798	(52030461)	+	GA-rich	Low_complexity	1	114	(0)	3225422
36	19.6	3.7	0.0	chr5	130126525	130126606	(51411653)	+	GA-rich	Low_complexity	1	85	(0)	3226166
280	26.0	5.0	0.0	chr5	130126740	130126835	(51411424)	C	MER94	DNA/hAT-Blackjack	(0)	134	34	3226167
1410	18.1	0.0	0.4	chr5	131355281	131355506	(50182753)	+	AluJb	SINE/Alu	87	311	(1)	3227824
16	13.9	3.0	0.0	chr5	131355507	131355539	(50182720)	+	GA-rich	Low_complexity	1	34	(0)	3227825
311	15.7	1.4	1.4	chr5	131524475	131524545	(50013714)	+	L1MEg	LINE/L1	2264	2334	(3812)	3228098
47	11.1	3.8	0.0	chr5	131524555	131524633	(50013626)	+	(GA)n	Simple_repeat	1	82	(0)	3228101
1984	16.0	0.0	0.0	chr5	131524634	131524915	(50013344)	C	AluSx	SINE/Alu	(30)	282	1	3228102
17534	14.5	2.5	2.8	chr5	131883590	131885341	(49652918)	+	L1MA2	LINE/L1	14	1758	(5807)	3228678
98	0.0	0.0	0.0	chr5	131885342	131885424	(49652835)	+	(AG)n	Simple_repeat	1	83	(0)	3228679
17534	14.5	2.5	2.8	chr5	131885425	131886800	(49651459)	+	L1MA2	LINE/L1	1759	3134	(4431)	3228678
2241	13.6	3.7	10.0	chr5	132183747	132184008	(49354251)	C	MSTA	LTR/ERVL-MaLR	(0)	428	196	3229010
1686	14.6	1.9	0.4	chr5	132184009	132184262	(49353997)	C	AluJb	SINE/Alu	(20)	292	35	3229011
17	24.2	1.6	3.2	chr5	132369671	132369732	(49168527)	+	(CCCGC)n	Simple_repeat	1	63	(0)	3229279
4374	22.5	7.3	1.4	chr5	132505483	132505971	(49032288)	+	L1MEf	LINE/L1	24	568	(5979)	3229466
40	0.0	0.0	0.0	chr5	132505972	132506005	(49032254)	+	(TC)n	Simple_repeat	1	34	(0)	3229467
4572	22.7	7.4	2.4	chr5	132506006	132506751	(49031508)	+	L1MEf	LINE/L1	569	1345	(5295)	3229466
781	27.5	9.3	11.2	chr5	132619574	132619783	(48918476)	C	L1ME3F	LINE/L1	(847)	5299	5075	3229662
54	0.0	1.9	1.8	chr5	132619784	132619837	(48918422)	+	(CT)n	Simple_repeat	1	55	(0)	3229664
781	27.5	9.3	11.2	chr5	132619838	132619910	(48918349)	C	L1ME3F	LINE/L1	(1072)	5074	5057	3229662
2186	16.5	11.4	0.9	chr5	132741663	132742201	(48796058)	C	L1MB8	LINE/L1	(1731)	5275	4673	3229851
231	18.5	12.2	1.5	chr5	132742194	132742207	(48796052)	C	L1MB8	LINE/L1	(2450)	4556	4543	3229851
33	7.6	0.0	0.0	chr5	132742208	132742249	(48796010)	+	(CT)n	Simple_repeat	1	42	(0)	3229857
231	18.5	12.2	1.5	chr5	132742250	132742300	(48795959)	C	L1MB8	LINE/L1	(2464)	4542	4483	3229851
740	19.8	3.4	8.5	chr5	132742312	132742459	(48795800)	C	MLT1A	LTR/ERVL-MaLR	(196)	178	33	3229858
1769	16.3	0.3	1.0	chr5	132787799	132788105	(48750154)	C	AluJb	SINE/Alu	(6)	306	2	3229915
2208	22.9	12.2	10.0	chr5	132788106	132788161	(48750098)	+	LTR102_Mam	LTR/ERVL	545	578	(273)	3229914
67	1.6	0.0	0.0	chr5	132788162	132788223	(48750036)	+	(GA)n	Simple_repeat	1	62	(0)	3229916
2208	22.9	12.2	10.0	chr5	132788224	132788503	(48749756)	+	LTR102_Mam	LTR/ERVL	579	851	(0)	3229914
264	33.0	3.7	2.8	chr5	133052684	133052789	(48485470)	+	L2b	LINE/L2	3266	3372	(3)	3230469
18	19.8	2.2	0.0	chr5	134526091	134526136	(47012123)	+	(CTCT)n	Simple_repeat	1	47	(0)	3232769
17	21.6	0.0	3.1	chr5	135034273	135034345	(46503914)	+	G-rich	Low_complexity	1	70	(0)	3233797
32	25.7	0.8	5.9	chr5	135034349	135034490	(46503769)	+	(CCCGC)n	Simple_repeat	1	134	(0)	3233798
1418	27.8	3.6	7.3	chr5	135817856	135818054	(45720205)	+	L1MEf	LINE/L1	449	641	(5999)	3234797
77	1.4	0.0	0.0	chr5	135818055	135818124	(45720135)	+	(CT)n	Simple_repeat	1	70	(0)	3234800
3644	23.8	3.3	3.7	chr5	135818125	135819388	(45718871)	+	L1MEf	LINE/L1	642	1791	(4849)	3234797
2293	8.2	3.9	9.8	chr5	136523707	136524112	(45014147)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3235785
39	10.0	3.0	1.5	chr5	136712537	136712612	(44825647)	+	(AG)n	Simple_repeat	1	77	(0)	3236017
477	13.2	0.0	0.0	chr5	136712651	136712726	(44825533)	+	L1MC3	LINE/L1	7056	7131	(654)	3236015
1646	19.9	1.9	4.4	chr5	136712960	136713409	(44824850)	+	MLT2B4	LTR/ERVL	1	455	(65)	3236020
40	0.0	4.9	0.0	chr5	136713410	136713450	(44824809)	+	(TC)n	Simple_repeat	1	43	(0)	3236021
1388	24.9	6.2	5.6	chr5	136713451	136713515	(44824744)	+	MLT2B4	LTR/ERVL	456	519	(1)	3236020
1003	18.9	7.6	1.9	chr5	136713516	136713774	(44824485)	+	L1MC2	LINE/L1	6062	6336	(8)	3236019
553	27.5	4.7	3.0	chr5	136800474	136800743	(44737516)	C	L1ME3G	LINE/L1	(120)	804	530	3236137
50	0.0	0.0	0.0	chr5	136800776	136800818	(44737441)	+	(TC)n	Simple_repeat	1	43	(0)	3236138
391	34.9	2.8	0.6	chr5	136800819	136800994	(44737265)	+	MLT1I	LTR/ERVL-MaLR	52	231	(180)	3236139
45	8.7	0.0	0.0	chr5	137683725	137683785	(43854474)	+	(CT)n	Simple_repeat	1	61	(0)	3237344
30	12.6	0.0	0.0	chr5	137683786	137683830	(43854429)	+	(AC)n	Simple_repeat	1	45	(0)	3237345
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
2475	7.7	1.3	0.0	chr5	137966155	137966452	(43571807)	+	AluSx	SINE/Alu	1	302	(10)	3237834
28	5.2	2.4	2.3	chr5	137966453	137966488	(43571771)	+	(AT)n	Simple_repeat	2	38	(0)	3237835
49	4.1	0.0	0.0	chr5	137966489	137966539	(43571720)	+	(AG)n	Simple_repeat	1	51	(0)	3237836
1128	14.1	10.8	0.8	chr5	137966540	137966790	(43571469)	+	L1MC	LINE/L1	5276	5554	(790)	3237837
16	0.0	0.0	0.0	chr5	138024795	138024812	(43513447)	+	(AC)n	Simple_repeat	1	18	(0)	3237938
41	2.6	0.0	0.0	chr5	138024813	138024852	(43513407)	+	(AG)n	Simple_repeat	1	40	(0)	3237939
2098	12.8	5.2	1.0	chr5	138024862	138025157	(43513102)	C	AluSx	SINE/Alu	(3)	309	1	3237940
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
272	26.7	1.3	0.0	chr5	138610123	138610197	(42928062)	+	MIRb	SINE/MIR	18	93	(175)	3239200
36	4.5	2.1	2.0	chr5	138610200	138610247	(42928012)	+	(TC)n	Simple_repeat	1	49	(0)	3239201
695	12.2	0.0	9.8	chr5	138610256	138610378	(42927881)	C	FLAM_A	SINE/Alu	(26)	116	6	3239202
17	10.7	0.0	3.0	chr5	138611596	138611629	(42926630)	+	(TTCC)n	Simple_repeat	1	32	(0)	3239204
51	13.5	0.0	0.0	chr5	138620995	138621075	(42917184)	+	(AG)n	Simple_repeat	1	81	(0)	3239225
835	17.2	0.7	0.0	chr5	138667799	138667932	(42870327)	+	FLAM_C	SINE/Alu	1	135	(8)	3239321
82	14.2	3.0	2.3	chr5	138667933	138668101	(42870158)	+	A-rich	Low_complexity	1	174	(0)	3239322
1329	18.2	11.2	7.9	chr5	139155247	139155443	(42382816)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	3240174
36	2.9	0.0	0.0	chr5	139155444	139155478	(42382781)	+	(AG)n	Simple_repeat	1	35	(0)	3240175
1329	18.2	11.2	7.9	chr5	139155479	139155649	(42382610)	C	MLT1B	LTR/ERVL-MaLR	(203)	187	8	3240174
838	17.6	0.0	2.6	chr5	139485938	139486090	(42052169)	+	FRAM	SINE/Alu	1	149	(27)	3240862
36	0.0	0.0	0.0	chr5	139486091	139486121	(42052138)	+	(AG)n	Simple_repeat	1	31	(0)	3240863
21	18.5	0.0	0.0	chr5	139561527	139561569	(41976690)	+	(GGC)n	Simple_repeat	1	43	(0)	3241047
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
12	9.1	7.7	4.8	chr5	139648420	139648458	(41889801)	+	(AGAGC)n	Simple_repeat	1	42	(0)	3241242
14	8.2	0.0	3.6	chr5	139648486	139648513	(41889746)	+	(CCCAG)n	Simple_repeat	1	28	(0)	3241243
21	24.2	0.0	8.7	chr5	140639334	140639436	(40898823)	+	(GCCCC)n	Simple_repeat	1	103	(0)	3242980
48	24.2	0.0	0.0	chr5	140658997	140659112	(40879147)	+	(GAGCGA)n	Simple_repeat	1	116	(0)	3243021
186	29.7	0.0	8.6	chr5	140665134	140665203	(40873056)	+	L3	LINE/CR1	3819	3882	(217)	3243031
2339	5.6	0.7	1.1	chr5	140665368	140665654	(40872605)	C	AluSg7	SINE/Alu	(21)	288	3	3243032
1495	16.1	0.3	11.5	chr5	141000228	141000339	(40537920)	+	AluJr	SINE/Alu	2	112	(200)	3243481
56	3.6	0.0	0.0	chr5	141000340	141000396	(40537863)	+	(TC)n	Simple_repeat	1	57	(0)	3243482
1495	16.1	0.3	11.5	chr5	141000397	141000421	(40537838)	+	AluJr	SINE/Alu	113	112	(200)	3243481
2475	8.8	0.0	0.0	chr5	141000422	141000727	(40537532)	C	AluSq2	SINE/Alu	(7)	306	1	3243483
21	17.6	1.9	1.9	chr5	141636810	141636862	(39901397)	+	(CCCGCCG)n	Simple_repeat	1	54	(0)	3244320
391	20.9	8.0	3.9	chr5	142086185	142086363	(39451896)	C	HAL1b	LINE/L1	(0)	2421	2235	3245220
411	29.1	10.7	0.0	chr5	142086416	142086532	(39451727)	C	MIRb	SINE/MIR	(61)	207	77	3245221
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
239	33.3	7.1	4.7	chr5	142202637	142202828	(39335431)	+	L1ME3G	LINE/L1	319	515	(409)	3245439
15	0.0	0.0	0.0	chr5	142202929	142202945	(39335314)	+	(GT)n	Simple_repeat	1	17	(0)	3245440
52	10.2	0.0	0.0	chr5	142202945	142203018	(39335241)	+	(GA)n	Simple_repeat	1	74	(0)	3245441
655	21.1	6.7	0.9	chr5	142203021	142203321	(39334938)	C	MLT2F	LTR/ERVL	(69)	594	254	3245442
664	28.0	4.1	1.1	chr5	142306114	142306301	(39231958)	+	MIRb	SINE/MIR	2	195	(73)	3245696
888	14.3	3.5	2.9	chr5	142306304	142306443	(39231816)	+	AluSx	SINE/Alu	137	277	(35)	3245697
31	3.3	0.0	0.0	chr5	142306445	142306475	(39231784)	+	(TC)n	Simple_repeat	1	31	(0)	3245698
1706	15.2	1.9	6.2	chr5	142306626	142306947	(39231312)	+	AluJr	SINE/Alu	5	312	(0)	3245699
15	4.8	0.0	0.0	chr5	142770469	142770490	(38767769)	+	(CTCG)n	Simple_repeat	1	22	(0)	3246639
2399	11.2	0.0	0.0	chr5	142948823	142949116	(38589143)	+	AluSx1	SINE/Alu	1	294	(18)	3246942
100	0.0	2.2	0.0	chr5	142949166	142949257	(38589002)	+	(AG)n	Simple_repeat	1	94	(0)	3246943
41149	4.9	1.5	1.0	chr5	143092464	143094506	(38443753)	C	HERVIP10FH-int	LTR/ERV1	(3069)	2033	3	3247156
52	15.4	2.1	0.0	chr5	143624896	143624989	(37913270)	+	GA-rich	Low_complexity	1	96	(0)	3247995
1100	20.6	0.9	0.4	chr5	143786872	143787100	(37751159)	C	LTR9D	LTR/ERV1	(0)	645	416	3248248
805	10.1	0.0	7.6	chr5	143787101	143787219	(37751040)	+	AluSx3	SINE/Alu	163	272	(39)	3248249
55	3.7	0.0	0.0	chr5	143787220	143787275	(37750984)	+	(CT)n	Simple_repeat	1	56	(0)	3248250
480	29.9	4.0	3.0	chr5	143811835	143812034	(37726225)	C	L2a	LINE/L2	(568)	2851	2650	3248297
219	23.8	10.6	3.5	chr5	143812105	143812191	(37726068)	C	MIR3	SINE/MIR	(21)	187	94	3248298
72	4.1	0.0	0.0	chr5	145116214	145116288	(36421971)	+	(TC)n	Simple_repeat	1	75	(0)	3250215
18	0.0	0.0	0.0	chr5	145116289	145116308	(36421951)	+	(GT)n	Simple_repeat	1	20	(0)	3250216
177	17.6	1.5	0.6	chr5	146064544	146064883	(35473376)	+	GA-rich	Low_complexity	1	345	(0)	3251800
55	4.9	0.0	0.0	chr5	146745151	146745213	(34793046)	+	(AGAGAG)n	Simple_repeat	1	63	(0)	3253090
354	32.5	6.9	12.0	chr5	146745219	146745494	(34792765)	+	MIRc	SINE/MIR	7	267	(1)	3253091
29389	7.0	3.5	2.0	chr5	147259650	147259896	(34278363)	C	HERVIP10FH-int	LTR/ERV1	(4069)	1033	783	3253950
113	11.8	6.8	0.0	chr5	147259897	147260116	(34278143)	+	(CT)n	Simple_repeat	1	235	(0)	3253954
2259	17.0	7.9	13.7	chr5	147260119	147261194	(34277065)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	3	3253955
13	8.5	4.0	0.0	chr5	147453505	147453529	(34084730)	+	(AGGG)n	Simple_repeat	1	26	(0)	3254263
21	11.2	0.0	0.0	chr5	147453968	147453997	(34084262)	+	(T)n	Simple_repeat	1	30	(0)	3254266
2212	14.7	1.9	8.3	chr5	147497418	147497877	(34040382)	+	L1MCa	LINE/L1	3859	4288	(2033)	3254345
37	5.1	0.0	0.0	chr5	147497897	147497937	(34040322)	+	(TC)n	Simple_repeat	1	41	(0)	3254351
6736	7.8	2.2	1.4	chr5	147497938	147499107	(34039152)	C	L1PA13	LINE/L1	(2)	6161	4968	3254352
2216	13.6	0.0	0.7	chr5	147764604	147764913	(33773346)	+	AluSc	SINE/Alu	1	308	(1)	3254810
99	15.6	0.6	0.0	chr5	147764914	147765084	(33773175)	+	GA-rich	Low_complexity	1	172	(0)	3254811
535	31.2	12.1	0.0	chr5	147975500	147975717	(33562542)	C	MIR	SINE/MIR	(0)	262	15	3255165
46	0.0	0.0	0.0	chr5	147975848	147975886	(33562373)	+	(AG)n	Simple_repeat	1	39	(0)	3255166
1620	19.7	3.8	12.0	chr5	148378280	148378664	(33159595)	C	MSTD	LTR/ERVL-MaLR	(1)	395	40	3255788
1972	15.8	11.0	0.8	chr5	148378665	148379046	(33159213)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	3255789
51	3.9	0.0	0.0	chr5	148938326	148938378	(32599881)	+	(TC)n	Simple_repeat	1	53	(0)	3256720
38	10.8	0.0	0.0	chr5	148979835	148979894	(32558365)	+	(TC)n	Simple_repeat	1	60	(0)	3256798
180	13.3	2.5	5.0	chr5	149111668	149112074	(32426185)	+	GA-rich	Low_complexity	1	417	(0)	3257021
7664	9.0	0.3	4.2	chr5	149146082	149147057	(32391202)	C	L1PA16	LINE/L1	(782)	5364	4409	3257088
32	3.2	0.0	0.0	chr5	149147058	149147089	(32391170)	+	(TC)n	Simple_repeat	1	32	(0)	3257090
7664	9.0	0.3	4.2	chr5	149147090	149147107	(32391152)	C	L1PA16	LINE/L1	(1738)	4408	4398	3257088
30	3.5	0.0	0.0	chr5	149147108	149147137	(32391122)	+	(TG)n	Simple_repeat	1	30	(0)	3257091
7664	13.2	1.5	0.9	chr5	149147138	149147524	(32390735)	C	L1PA16	LINE/L1	(1749)	4397	3690	3257088
1153	8.0	3.0	0.0	chr5	149169973	149170134	(32368125)	C	L1PA13	LINE/L1	(0)	6163	5997	3257140
59	1.6	3.2	0.0	chr5	149170229	149170290	(32367969)	+	(TC)n	Simple_repeat	1	64	(0)	3257141
260	24.3	5.1	2.6	chr5	149170293	149170368	(32367891)	C	MLT1K	LTR/ERVL-MaLR	(209)	386	309	3257142
1557	22.6	10.8	6.9	chr5	149208156	149208350	(32329909)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	416	3257208
67	9.1	0.0	0.0	chr5	149208351	149208443	(32329816)	+	(TC)n	Simple_repeat	1	93	(0)	3257209
1557	22.6	10.8	6.9	chr5	149208444	149208795	(32329464)	C	MLT1K	LTR/ERVL-MaLR	(180)	415	22	3257208
49	2.2	0.0	0.0	chr5	149307812	149307857	(32230402)	+	(CT)n	Simple_repeat	1	46	(0)	3257433
2077	11.7	2.7	0.3	chr5	149307874	149308163	(32230096)	+	AluSz	SINE/Alu	1	297	(15)	3257434
264	30.5	5.6	4.8	chr5	149320921	149321044	(32217215)	C	MamRep605	LTR?	(248)	601	477	3257468
848	26.4	3.1	4.2	chr5	149920592	149920764	(31617495)	C	MER102c	DNA/hAT-Charlie	(88)	243	74	3258835
568	15.9	0.0	1.1	chr5	149920781	149920868	(31617391)	+	AluJo	SINE/Alu	29	115	(197)	3258837
85	8.3	4.1	1.3	chr5	149920870	149921014	(31617245)	+	(AGAA)n	Simple_repeat	1	151	(0)	3258838
895	15.0	0.0	0.0	chr5	150224879	150225011	(31313248)	+	AluJb	SINE/Alu	1	133	(179)	3259479
53	3.8	0.0	0.0	chr5	150225042	150225095	(31313164)	+	(GA)n	Simple_repeat	1	54	(0)	3259480
24	14.0	0.0	2.4	chr5	150285746	150285787	(31252472)	+	(CT)n	Simple_repeat	1	42	(0)	3259618
53	0.0	0.0	0.0	chr5	150473384	150473428	(31064831)	+	(GT)n	Simple_repeat	1	45	(0)	3260035
45	9.5	0.0	0.0	chr5	150473429	150473495	(31064764)	+	(AGAG)n	Simple_repeat	1	67	(0)	3260036
2238	8.3	0.3	1.4	chr5	150473554	150473841	(31064418)	+	AluSq2	SINE/Alu	1	285	(28)	3260037
450	24.0	0.0	2.0	chr5	150487115	150487216	(31051043)	+	MIRc	SINE/MIR	64	163	(105)	3260075
189	26.0	4.9	4.9	chr5	150487161	150487241	(31051018)	C	L2	LINE/L2	(1884)	1535	1455	3260076
515	20.9	16.1	2.5	chr5	150487284	150487479	(31050780)	C	MIRb	SINE/MIR	(19)	249	9	3260077
14	12.7	0.0	0.0	chr5	150656530	150656555	(30881704)	+	(CCG)n	Simple_repeat	1	26	(0)	3260455
37	2.6	0.0	0.0	chr5	150656738	150656776	(30881483)	+	(CGCCCC)n	Simple_repeat	1	39	(0)	3260456
377	28.5	1.9	7.4	chr5	150657192	150657354	(30880905)	+	MIR3	SINE/MIR	11	164	(44)	3260457
21	4.0	0.0	0.0	chr5	150657407	150657432	(30880827)	+	(CT)n	Simple_repeat	1	26	(0)	3260458
53	0.0	0.0	0.0	chr5	150657433	150657477	(30880782)	+	(CA)n	Simple_repeat	1	45	(0)	3260459
43	0.0	0.0	0.0	chr5	150701438	150701474	(30836785)	+	(TC)n	Simple_repeat	1	37	(0)	3260548
23	12.6	0.0	0.0	chr5	150701477	150701511	(30836748)	+	(CA)n	Simple_repeat	1	35	(0)	3260549
563	21.1	9.5	2.6	chr5	150701513	150701668	(30836591)	+	MER53	DNA/hAT	26	193	(0)	3260550
33	21.1	3.1	5.3	chr5	151252744	151252870	(30285389)	+	(GCCCC)n	Simple_repeat	1	131	(0)	3261497
233	30.1	4.0	2.7	chr5	151717638	151717784	(29820475)	+	MLT1K	LTR/ERVL-MaLR	287	435	(160)	3262471
66	23.2	2.3	0.6	chr5	151717786	151717962	(29820297)	+	(AGAGAC)n	Simple_repeat	1	181	(0)	3262472
574	30.7	3.2	3.6	chr5	151717997	151718249	(29820010)	+	MLT1J	LTR/ERVL-MaLR	1	252	(260)	3262473
228	26.7	22.7	3.2	chr5	152515212	152515366	(29022893)	C	MIR3	SINE/MIR	(12)	196	3	3263891
210	2.5	0.0	0.9	chr5	152515396	152515607	(29022652)	+	(TCTT)n	Simple_repeat	1	212	(0)	3263892
771	23.4	18.3	13.7	chr5	154173378	154173903	(27364356)	+	MLT1K	LTR/ERVL-MaLR	11	566	(29)	3266571
28	34.9	2.2	3.3	chr5	154682789	154682966	(26855293)	+	(CTCCCCC)n	Simple_repeat	1	182	(0)	3267769
92	6.3	8.7	0.0	chr5	156444052	156444235	(25094024)	+	(CT)n	Simple_repeat	1	200	(0)	3270843
2020	14.5	1.0	1.0	chr5	156795882	156796184	(24742075)	+	AluSx	SINE/Alu	1	303	(9)	3271376
40	0.0	0.0	0.0	chr5	156796270	156796303	(24741956)	+	(GA)n	Simple_repeat	1	34	(0)	3271377
805	25.1	5.4	2.8	chr5	157795347	157795633	(23742626)	+	L1MC4	LINE/L1	7629	7923	(119)	3273365
16	5.3	0.0	0.0	chr5	157795642	157795661	(23742598)	+	(GA)n	Simple_repeat	1	20	(0)	3273366
1738	17.4	1.6	1.0	chr5	157795751	157796055	(23742204)	+	AluJo	SINE/Alu	6	312	(0)	3273367
37	6.6	0.0	0.0	chr5	157806964	157807011	(23731248)	+	(GA)n	Simple_repeat	1	48	(0)	3273380
807	16.1	0.0	0.0	chr5	157830594	157830711	(23707548)	+	AluJo	SINE/Alu	1	118	(194)	3273411
53	2.0	0.0	0.0	chr5	157830748	157830797	(23707462)	+	(CT)n	Simple_repeat	1	50	(0)	3273412
17	0.0	0.0	0.0	chr5	157830798	157830816	(23707443)	+	(AT)n	Simple_repeat	1	19	(0)	3273413
1236	15.5	0.0	8.0	chr5	157830829	157831067	(23707192)	+	AluJb	SINE/Alu	87	306	(6)	3273414
38	5.5	5.3	0.0	chr5	158546288	158546344	(22991915)	+	(TC)n	Simple_repeat	1	60	(0)	3274782
305	28.6	3.0	0.0	chr5	158555490	158555587	(22982672)	+	MLT1F1	LTR/ERVL-MaLR	1	101	(459)	3274797
51	2.1	0.0	0.0	chr5	158555623	158555670	(22982589)	+	(TC)n	Simple_repeat	1	48	(0)	3274798
1267	21.9	3.6	0.4	chr5	158555671	158555980	(22982279)	+	MLT1F1	LTR/ERVL-MaLR	194	558	(11)	3274797
21	23.8	0.0	0.0	chr5	159035102	159035153	(22503106)	+	GA-rich	Low_complexity	1	52	(0)	3275471
73	5.4	6.8	0.0	chr5	159050147	159050263	(22487996)	+	(TC)n	Simple_repeat	1	125	(0)	3275490
22	15.8	0.0	0.0	chr5	159093499	159093535	(22444724)	+	(CT)n	Simple_repeat	1	37	(0)	3275538
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
32	18.1	3.1	0.0	chr5	159100169	159100233	(22438026)	+	GA-rich	Low_complexity	1	67	(0)	3275550
19	27.9	4.0	1.3	chr5	159209582	159209656	(22328603)	+	(GC)n	Simple_repeat	1	78	(0)	3275707
31	3.3	0.0	0.0	chr5	159245093	159245123	(22293136)	+	(TC)n	Simple_repeat	1	31	(0)	3275771
1838	15.5	0.3	3.7	chr5	159245124	159245419	(22292840)	C	AluJr	SINE/Alu	(26)	286	1	3275772
1870	12.6	0.0	9.1	chr5	159535649	159535835	(22002424)	C	AluSz6	SINE/Alu	(2)	310	138	3276294
47	0.0	0.0	0.0	chr5	159535836	159535875	(22002384)	+	(CT)n	Simple_repeat	1	40	(0)	3276295
1870	12.6	0.0	9.1	chr5	159535876	159535906	(22002353)	C	AluSz6	SINE/Alu	(175)	137	121	3276294
55	0.0	0.0	0.0	chr5	159881300	159881346	(21656913)	+	(TC)n	Simple_repeat	1	47	(0)	3276894
429	28.4	0.0	1.6	chr5	160522489	160522617	(21015642)	+	MIR	SINE/MIR	48	174	(88)	3278324
22	28.8	0.0	0.0	chr5	160522672	160522730	(21015529)	+	GA-rich	Low_complexity	1	59	(0)	3278325
22	21.7	1.8	1.8	chr5	160522722	160522754	(21015505)	+	(AT)n	Simple_repeat	1	34	(0)	3278326
38	0.0	0.0	0.0	chr5	160522755	160522787	(21015472)	+	(TC)n	Simple_repeat	1	33	(0)	3278327
22	21.7	1.8	1.8	chr5	160522788	160522808	(21015451)	+	(AT)n	Simple_repeat	1	21	(0)	3278328
772	21.4	0.0	0.0	chr5	160522809	160522939	(21015320)	C	FLAM_A	SINE/Alu	(11)	131	1	3278329
2974	12.7	6.9	8.6	chr5	160526692	160526872	(21011387)	+	LTR18B	LTR/ERVL	24	198	(416)	3278337
53	0.0	0.0	0.0	chr5	160526873	160526917	(21011342)	+	(GA)n	Simple_repeat	1	45	(0)	3278338
2974	12.7	6.9	8.6	chr5	160526918	160527337	(21010922)	+	LTR18B	LTR/ERVL	199	614	(0)	3278337
3834	20.9	8.8	3.5	chr5	162316433	162316657	(19221602)	C	L1MCa	LINE/L1	(4995)	1513	1249	3280983
75	3.8	1.2	0.0	chr5	162316658	162316738	(19221521)	+	(TC)n	Simple_repeat	1	82	(0)	3280984
1234	27.8	6.4	9.6	chr5	163421321	163421885	(18116374)	+	MLT1G1	LTR/ERVL-MaLR	1	546	(33)	3282529
5317	21.4	14.7	11.9	chr5	163448168	163449972	(18088287)	+	L1MB7	LINE/L1	3060	5063	(1083)	3282565
60	9.8	0.0	0.0	chr5	163643875	163643963	(17894296)	+	(AGAGAG)n	Simple_repeat	1	89	(0)	3282902
60	1.8	0.0	0.0	chr5	167663142	167663197	(13875062)	+	(GA)n	Simple_repeat	1	56	(0)	3288670
180	26.9	7.1	0.0	chr5	167663201	167663252	(13875007)	+	MER5A	DNA/hAT-Charlie	70	125	(64)	3288671
617	29.2	16.1	3.4	chr5	167663263	167663915	(13874344)	C	L1MEd	LINE/L1	(5480)	1606	868	3288668
47	0.0	0.0	0.0	chr5	167746676	167746715	(13791544)	+	(AG)n	Simple_repeat	1	40	(0)	3288795
25	11.5	0.0	0.0	chr5	167746811	167746848	(13791411)	+	(TG)n	Simple_repeat	1	38	(0)	3288796
209	27.7	0.0	7.1	chr5	168339731	168339800	(13198459)	C	MIR	SINE/MIR	(50)	212	148	3289822
64	2.2	0.9	6.6	chr5	168339807	168339851	(13198408)	+	(TTTC)n	Simple_repeat	1	45	(0)	3289823
108	9.8	0.0	0.0	chr5	168339852	168340006	(13198253)	+	(TC)n	Simple_repeat	1	155	(0)	3289824
64	2.2	0.9	6.6	chr5	168340007	168340065	(13198194)	+	(TTTC)n	Simple_repeat	2	55	(0)	3289825
1996	14.0	0.7	0.0	chr5	168340068	168340352	(13197907)	C	AluSx	SINE/Alu	(2)	310	24	3289826
18	0.0	0.0	0.0	chr5	168528570	168528589	(13009670)	+	(TC)n	Simple_repeat	1	20	(0)	3290249
1484	24.6	7.1	2.9	chr5	168624983	168625299	(12912960)	+	L1ME3A	LINE/L1	5805	6135	(38)	3290448
14	0.0	4.8	0.0	chr5	168694557	168694577	(12843682)	+	(TCAG)n	Simple_repeat	1	22	(0)	3290591
29	10.0	0.0	0.0	chr5	168694580	168694622	(12843637)	+	(TC)n	Simple_repeat	1	43	(0)	3290592
2285	11.8	0.0	0.0	chr5	168694623	168694918	(12843341)	C	AluSx1	SINE/Alu	(16)	296	1	3290593
35	6.8	2.1	0.0	chr5	169006560	169006606	(12531653)	+	(TC)n	Simple_repeat	1	48	(0)	3291092
23	0.0	0.0	0.0	chr5	169006607	169006647	(12531612)	+	(AC)n	Simple_repeat	1	41	(0)	3291093
43	0.0	0.0	0.0	chr5	169568238	169568274	(11969985)	+	(CT)n	Simple_repeat	1	37	(0)	3292001
46	18.2	4.8	0.0	chr5	170334975	170335091	(11203168)	+	GA-rich	Low_complexity	1	122	(0)	3293406
2318	11.4	0.0	0.0	chr5	170335203	170335508	(11202751)	+	AluSx	SINE/Alu	1	306	(6)	3293407
196	31.3	22.8	0.0	chr5	170599481	170599595	(10938664)	+	L3	LINE/CR1	3948	4096	(3)	3293938
26	32.4	3.5	2.0	chr5	171168817	171168961	(10369298)	+	(TCTCTC)n	Simple_repeat	1	150	(0)	3294801
46	0.0	0.0	0.0	chr5	171313353	171313391	(10224868)	+	(TC)n	Simple_repeat	1	39	(0)	3295012
1701	19.9	2.7	8.2	chr5	171676206	171676593	(9861666)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	195	3295809
29	2.8	2.7	0.0	chr5	171676595	171676631	(9861628)	+	(AG)n	Simple_repeat	1	38	(0)	3295810
633	25.9	11.3	1.1	chr5	171676643	171676833	(9861426)	C	MLT1F2	LTR/ERVL-MaLR	(339)	221	9	3295809
17	13.1	0.0	0.0	chr5	171857414	171857439	(9680820)	+	(TC)n	Simple_repeat	1	26	(0)	3296184
54	0.0	0.0	0.0	chr5	171857451	171857496	(9680763)	+	(CT)n	Simple_repeat	1	46	(0)	3296185
4905	16.3	4.5	3.7	chr5	171930776	171931798	(9606461)	+	L1MC1	LINE/L1	4233	5268	(878)	3296303
73	7.8	1.0	0.0	chr5	171931799	171931895	(9606364)	+	(TC)n	Simple_repeat	1	98	(0)	3296306
214	34.8	10.1	1.1	chr5	171985100	171985288	(9552971)	+	L2c	LINE/L2	2660	2867	(552)	3296414
2055	13.9	1.7	0.0	chr5	171992148	171992441	(9545818)	+	AluSx3	SINE/Alu	1	299	(12)	3296430
36	28.1	4.2	0.0	chr5	171992446	171992565	(9545694)	+	GA-rich	Low_complexity	1	125	(0)	3296431
19	18.9	0.0	0.0	chr5	172006555	172006596	(9531663)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	3296455
182	32.4	2.9	0.0	chr5	172195510	172195577	(9342682)	C	MIRb	SINE/MIR	(170)	98	29	3296909
464	22.3	8.7	6.5	chr5	172342916	172343083	(9195176)	+	MIRb	SINE/MIR	49	220	(48)	3297230
1184	18.6	0.9	3.5	chr5	172499770	172500000	(9038259)	+	AluJr4	SINE/Alu	1	225	(87)	3297578
459	10.5	0.0	0.0	chr5	172500001	172500057	(9038202)	+	AluJo	SINE/Alu	226	282	(30)	3297579
43	2.5	0.0	0.0	chr5	172500069	172500109	(9038150)	+	(AG)n	Simple_repeat	1	41	(0)	3297580
350	25.8	4.0	0.0	chr5	172500110	172500218	(9038041)	+	MIRc	SINE/MIR	21	145	(123)	3297581
369	30.9	5.5	2.4	chr5	172500251	172500349	(9037910)	+	L1MC5a	LINE/L1	579	686	(2091)	3297582
2150	24.8	9.3	5.4	chr5	172559482	172559819	(8978440)	C	L1ME1	LINE/L1	(10)	6169	5829	3297710
198	18.5	8.5	3.0	chr5	172640928	172640994	(8897265)	+	L2b	LINE/L2	3302	3372	(3)	3297895
13	13.2	6.1	0.0	chr5	172641169	172641215	(8897044)	+	(GGAGGC)n	Simple_repeat	1	49	(0)	3297896
19	28.0	0.0	2.9	chr5	172641218	172641285	(8896974)	+	(CCG)n	Simple_repeat	1	68	(0)	3297897
17	23.9	5.2	2.5	chr5	172641286	172641292	(8896967)	+	(CTCCGC)n	Simple_repeat	3	81	(0)	3297898
208	11.8	0.0	0.0	chr5	172765982	172766015	(8772244)	+	MIRc	SINE/MIR	118	151	(117)	3298151
13	23.8	1.5	7.2	chr5	172770604	172770671	(8767588)	+	(GCGCGCC)n	Simple_repeat	1	69	(0)	3298155
12	22.4	0.0	2.6	chr5	172771386	172771423	(8766836)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	3298156
1990	10.0	6.7	0.6	chr5	173252632	173252982	(8285277)	C	THE1D	LTR/ERVL-MaLR	(2)	379	6	3299266
81	22.1	3.0	0.5	chr5	173253024	173253225	(8285034)	+	GA-rich	Low_complexity	1	208	(0)	3299267
18	13.5	3.0	0.0	chr5	173283426	173283458	(8254801)	+	GA-rich	Low_complexity	1	34	(0)	3299339
44	2.4	0.0	0.0	chr5	173283473	173283514	(8254745)	+	(GA)n	Simple_repeat	1	42	(0)	3299340
40	0.0	0.0	0.0	chr5	173318267	173318300	(8219959)	+	(AG)n	Simple_repeat	1	34	(0)	3299407
186	21.6	0.0	0.0	chr5	173318447	173318483	(8219776)	C	L2c	LINE/L2	(10)	3377	3341	3299408
42	0.0	0.0	0.0	chr5	173719545	173719580	(7818679)	+	(TG)n	Simple_repeat	1	36	(0)	3300131
43	2.5	0.0	0.0	chr5	173719583	173719623	(7818636)	+	(AG)n	Simple_repeat	1	41	(0)	3300132
78	8.0	6.8	0.0	chr5	173770737	173770869	(7767390)	+	(GA)n	Simple_repeat	1	142	(0)	3300254
411	33.0	1.0	13.8	chr5	174056403	174056641	(7481618)	+	MIRb	SINE/MIR	42	249	(19)	3300760
206	30.4	6.0	0.0	chr5	174426239	174426317	(7111942)	C	MIRb	SINE/MIR	(98)	170	87	3301489
48	2.1	0.0	0.0	chr5	174426369	174426416	(7111843)	+	(TCAC)n	Simple_repeat	1	48	(0)	3301490
20	8.0	0.0	0.0	chr5	174521648	174521674	(7016585)	+	(GT)n	Simple_repeat	1	27	(0)	3301651
281	27.8	2.6	0.7	chr5	174521674	174522554	(7015705)	+	GA-rich	Low_complexity	1	904	(0)	3301652
510	29.8	6.2	5.7	chr5	174522775	174522984	(7015275)	C	MIRb	SINE/MIR	(57)	211	1	3301654
2071	11.1	0.4	2.1	chr5	174590641	174590929	(6947330)	+	AluSq	SINE/Alu	1	284	(29)	3301797
74	21.8	2.6	1.5	chr5	174590930	174591108	(6947151)	+	A-rich	Low_complexity	15	195	(0)	3301798
29	11.4	2.0	2.0	chr5	174693771	174693820	(6844439)	+	GA-rich	Low_complexity	1	51	(0)	3302028
256	33.9	11.7	3.0	chr5	174693884	174694332	(6843927)	C	L2a	LINE/L2	(69)	3357	2828	3302029
100	0.0	4.5	0.9	chr5	174701508	174701617	(6836642)	+	(CTTT)n	Simple_repeat	1	115	(0)	3302047
30	10.8	2.0	0.0	chr5	174701618	174701665	(6836594)	+	(TC)n	Simple_repeat	1	49	(0)	3302048
1735	15.8	1.1	4.7	chr5	174701666	174701962	(6836297)	C	AluJb	SINE/Alu	(20)	292	7	3302049
23	17.8	3.9	4.9	chr5	174721062	174721139	(6817120)	+	G-rich	Low_complexity	1	81	(0)	3302103
45	2.4	0.0	0.0	chr5	175093515	175093557	(6444702)	+	(AG)n	Simple_repeat	1	43	(0)	3302798
1604	18.6	8.8	3.8	chr5	175093618	175093963	(6444296)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3302799
1301	30.1	8.6	2.3	chr5	175275810	175275947	(6262312)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	443	3303144
43	4.5	0.0	0.0	chr5	175275948	175275993	(6262266)	+	(TC)n	Simple_repeat	1	46	(0)	3303145
478	26.1	2.6	0.0	chr5	175275997	175276107	(6262152)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	3303146
1301	30.1	8.6	2.3	chr5	175276108	175276521	(6261738)	C	MLT1K	LTR/ERVL-MaLR	(165)	430	3	3303144
234	28.8	1.7	0.0	chr5	175313525	175313583	(6224676)	C	MLT1E1A	LTR/ERVL-MaLR	(410)	150	91	3303210
1221	12.8	14.0	0.8	chr5	175313646	175313714	(6224545)	+	THE1D	LTR/ERVL-MaLR	110	205	(176)	3303211
55	0.0	0.0	0.0	chr5	175313715	175313761	(6224498)	+	(CT)n	Simple_repeat	1	47	(0)	3303212
1221	12.8	14.0	0.8	chr5	175313762	175313927	(6224332)	+	THE1D	LTR/ERVL-MaLR	206	380	(1)	3303211
355	27.3	1.0	0.0	chr5	175378574	175378672	(6159587)	C	X7A_LINE	LINE/CR1	(50)	217	118	3303328
345	27.2	8.1	1.8	chr5	175378722	175378912	(6159347)	+	MIRb	SINE/MIR	1	195	(35)	3303329
106	11.2	2.8	4.5	chr5	175650630	175650847	(5887412)	+	(CTTT)n	Simple_repeat	1	224	(0)	3303843
1899	15.0	0.3	6.9	chr5	175650849	175651182	(5887077)	C	AluSz	SINE/Alu	(0)	312	1	3303844
95	2.2	1.1	0.0	chr5	175871394	175871486	(5666773)	+	(GA)n	Simple_repeat	1	94	(0)	3304315
71	6.9	1.1	0.0	chr5	176834666	176834756	(4703503)	+	(TC)n	Simple_repeat	1	92	(0)	3306086
704	27.1	11.9	8.2	chr5	177006938	177007059	(4531200)	+	L1ME3Cz	LINE/L1	270	394	(603)	3306400
2361	9.0	0.3	0.3	chr5	177007060	177007370	(4530889)	+	AluSx	SINE/Alu	2	312	(0)	3306401
37	4.5	2.1	0.0	chr5	177099885	177099931	(4438328)	+	(TTCC)n	Simple_repeat	1	48	(0)	3306646
54	31.3	0.5	3.5	chr5	177099932	177100121	(4438138)	+	(CTTT)n	Simple_repeat	1	185	(0)	3306647
1724	16.9	0.7	1.8	chr5	177100122	177100400	(4437859)	C	AluJr	SINE/Alu	(1)	311	36	3306648
11	15.9	12.2	0.0	chr5	177133528	177133576	(4404683)	+	(CGGCAG)n	Simple_repeat	1	55	(0)	3306741
1649	20.3	16.1	2.8	chr5	177153892	177154362	(4383897)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	1	3306788
797	15.2	0.0	3.8	chr5	177195201	177195332	(4342927)	+	FLAM_C	SINE/Alu	1	127	(16)	3306912
21	0.0	3.5	3.3	chr5	177195454	177195482	(4342777)	+	(TC)n	Simple_repeat	1	30	(0)	3306913
1656	19.0	0.0	0.7	chr5	177195491	177195769	(4342490)	C	AluJb	SINE/Alu	(35)	277	1	3306914
12	31.1	1.8	0.0	chr5	177404202	177404256	(4134003)	+	G-rich	Low_complexity	1	56	(0)	3307346
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
11	9.7	8.6	2.6	chr5	177446973	177447007	(4091252)	+	G-rich	Low_complexity	1	38	(0)	3307434
12	21.7	0.0	0.0	chr5	177447121	177447152	(4091107)	+	GA-rich	Low_complexity	1	32	(0)	3307435
16	16.8	0.0	0.0	chr5	177447249	177447276	(4090983)	+	(C)n	Simple_repeat	1	28	(0)	3307436
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
17	13.5	0.0	0.0	chr5	177497383	177497415	(4040844)	+	(GGCGGG)n	Simple_repeat	1	33	(0)	3307530
228	28.6	0.0	0.0	chr5	177501296	177501365	(4036894)	+	MIR3	SINE/MIR	33	102	(106)	3307537
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
16	14.2	5.1	0.0	chr5	178113402	178113440	(3424819)	+	G-rich	Low_complexity	1	41	(0)	3308587
18	24.7	7.6	1.0	chr5	178113595	178113686	(3424573)	+	(CCGGCG)n	Simple_repeat	1	99	(0)	3308588
30	0.0	0.0	0.0	chr5	178249684	178249716	(3288543)	+	(AC)n	Simple_repeat	1	33	(0)	3308865
41	0.0	0.0	0.0	chr5	178249717	178249751	(3288508)	+	(CT)n	Simple_repeat	1	35	(0)	3308866
72	16.5	8.9	0.0	chr5	178491008	178491198	(3047061)	+	GA-rich	Low_complexity	1	208	(0)	3309270
5373	20.8	9.4	9.3	chr5	179004715	179006529	(2531730)	+	L1M4	LINE/L1	3964	5783	(861)	3310201
23	0.0	0.0	0.0	chr5	179006530	179006554	(2531705)	+	(CA)n	Simple_repeat	1	25	(0)	3310203
44	2.4	0.0	0.0	chr5	179006555	179006596	(2531663)	+	(AG)n	Simple_repeat	1	42	(0)	3310204
1645	19.9	6.5	0.6	chr5	179006598	179006931	(2531328)	C	MLT2D	LTR/ERVL	(57)	357	3	3310205
12	24.9	5.8	0.0	chr5	179796340	179796391	(1741868)	+	(CGCGCCG)n	Simple_repeat	1	55	(0)	3311605
2837	19.0	3.6	7.0	chr5	179936670	179937933	(1600326)	+	L1MB5	LINE/L1	4690	5849	(393)	3311827
46	2.3	0.0	0.0	chr5	179937934	179937977	(1600282)	+	(GA)n	Simple_repeat	1	44	(0)	3311828
1940	14.3	1.1	0.4	chr5	179937979	179938257	(1600002)	C	AluJb	SINE/Alu	(31)	281	1	3311829
195	23.9	0.8	0.8	chr5	180208636	180208708	(1329551)	C	MIR1_Amn	SINE/MIR	(63)	167	95	3312241
33	19.2	8.1	4.0	chr5	180208834	180208993	(1329266)	+	(CCCGCCG)n	Simple_repeat	1	173	(0)	3312242
20	31.7	0.0	3.3	chr5	180494108	180494198	(1044061)	+	GA-rich	Low_complexity	1	91	(0)	3312778
46	31.0	2.9	3.2	chr5	180494430	180494672	(1043587)	+	(GGC)n	Simple_repeat	1	250	(0)	3312779
4570	11.7	4.9	7.6	chr5	180521566	180522139	(1016120)	C	L1PA16	LINE/L1	(9)	6157	5614	3312838
15	29.6	2.0	0.0	chr5	180809785	180809833	(728426)	+	(AC)n	Simple_repeat	1	50	(0)	3313277
14	15.3	0.0	0.0	chr5	181032142	181032170	(506089)	+	(ACAC)n	Simple_repeat	1	29	(0)	3313544
49	5.7	5.4	0.0	chr5	181032190	181032263	(505996)	+	(GA)n	Simple_repeat	1	78	(0)	3313545
7002	11.5	11.0	0.2	chr5	181032306	181033422	(504837)	+	LTR12D	LTR/ERV1	1	1253	(1)	3313546
49	6.5	0.0	0.0	chr5	181046665	181046728	(491531)	+	(GA)n	Simple_repeat	1	64	(0)	3313562
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
734	0.0	0.0	0.0	chr5	181187701	181187782	(350477)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3313822
606	5.6	0.0	0.0	chr5	181206868	181206939	(331320)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3313850
688	0.0	0.0	0.0	chr5	181218270	181218342	(319917)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313881
2312	8.4	0.7	0.0	chr5	181254009	181254316	(283943)	+	AluY	SINE/Alu	1	310	(1)	3313934
16	0.0	0.0	0.0	chr5	181254366	181254385	(283874)	+	(TTG)n	Simple_repeat	1	20	(0)	3313935
2216	6.8	0.0	0.4	chr5	181254394	181254674	(283585)	C	AluSc8	SINE/Alu	(31)	280	1	3313936
212	38.3	7.0	0.8	chr6	287597	287717	(170518262)	+	MamRTE1	LINE/RTE-BovB	3552	3680	(132)	3314643
40	2.1	6.1	0.0	chr6	287757	287805	(170518174)	+	(CT)n	Simple_repeat	1	52	(0)	3314644
2420	27.6	11.3	7.6	chr6	533651	534944	(170271035)	+	L1MEj	LINE/L1	246	1593	(567)	3314922
14	24.1	0.0	8.6	chr6	684159	684228	(170121751)	+	GA-rich	Low_complexity	1	70	(0)	3315100
18	17.2	2.0	3.9	chr6	771050	771093	(170034886)	+	(TCCT)n	Simple_repeat	1	43	(0)	3315221
66	5.6	0.0	0.0	chr6	771094	771167	(170034812)	+	(TC)n	Simple_repeat	1	74	(0)	3315222
18	17.2	2.0	3.9	chr6	771168	771184	(170034795)	+	(TCCT)n	Simple_repeat	2	17	(0)	3315223
242	27.3	6.2	8.3	chr6	897786	897917	(169908062)	+	MIRc	SINE/MIR	2	130	(138)	3315365
183	28.4	11.9	0.0	chr6	897949	898022	(169907957)	C	L2a	LINE/L2	(32)	3394	3311	3315366
64	10.1	1.1	0.0	chr6	898026	898120	(169907859)	+	(GA)n	Simple_repeat	1	96	(0)	3315367
108	26.1	1.0	0.7	chr6	1146628	1146917	(169659062)	+	GA-rich	Low_complexity	1	293	(0)	3315700
113	29.3	4.4	0.7	chr6	1399077	1399510	(169406469)	+	GA-rich	Low_complexity	1	453	(0)	3316052
271	30.9	2.1	0.0	chr6	1597384	1597477	(169208502)	+	UCON80_AMi	Unknown	70	165	(57)	3316375
34	6.3	4.0	0.0	chr6	1641705	1641754	(169164225)	+	(TC)n	Simple_repeat	1	52	(0)	3316411
18	17.8	0.0	0.0	chr6	1679931	1679968	(169126011)	+	A-rich	Low_complexity	1	38	(0)	3316457
263	24.3	14.6	0.0	chr6	2031008	2031077	(168774902)	C	MER102a	DNA/hAT-Charlie	(3)	327	246	3316865
511	17.6	6.9	1.8	chr6	2031082	2031191	(168774788)	C	MER5A1	DNA/hAT-Charlie	(0)	166	51	3316866
32	0.0	3.2	0.0	chr6	2141866	2141896	(168664083)	+	(CT)n	Simple_repeat	1	32	(0)	3317001
43688	6.0	1.0	0.5	chr6	2310864	2316711	(168489268)	C	Harlequin-int	LTR/ERV1	(0)	6896	1015	3317254
40	2.3	2.1	2.1	chr6	2316712	2316758	(168489221)	+	(TC)n	Simple_repeat	1	48	(0)	3317255
187	26.3	2.5	1.6	chr6	2468021	2468616	(168337363)	+	GA-rich	Low_complexity	1	611	(0)	3317480
10267	20.8	6.9	3.6	chr6	2653289	2654377	(168151602)	+	L1M4	LINE/L1	1305	2417	(5100)	3317737
13	21.5	3.4	4.9	chr6	3228858	3228916	(167577063)	+	(GCACGC)n	Simple_repeat	1	61	(0)	3318606
16	0.0	0.0	0.0	chr6	3229004	3229021	(167576958)	+	(GT)n	Simple_repeat	1	18	(0)	3318607
32	3.2	0.0	0.0	chr6	3229022	3229053	(167576926)	+	(GA)n	Simple_repeat	1	32	(0)	3318608
32	3.0	0.0	0.0	chr6	3457092	3457125	(167348854)	+	(CTC)n	Simple_repeat	1	34	(0)	3318917
29	0.0	0.0	2.9	chr6	3511327	3511361	(167294618)	+	(TG)n	Simple_repeat	1	35	(0)	3319017
40	10.5	0.0	0.0	chr6	3511361	3511422	(167294557)	+	(GAGAGA)n	Simple_repeat	1	62	(0)	3319018
937	20.2	1.3	12.1	chr6	4179806	4180070	(166625909)	+	MLT1C	LTR/ERVL-MaLR	1	236	(231)	3320076
47	15.9	0.0	0.0	chr6	4180071	4180154	(166625825)	+	GA-rich	Low_complexity	1	84	(0)	3320077
932	22.7	11.1	1.1	chr6	4180156	4180440	(166625539)	+	MLT1C	LTR/ERVL-MaLR	181	505	(0)	3320078
55	0.0	0.0	0.0	chr6	4819117	4819163	(165986816)	+	(TC)n	Simple_repeat	1	47	(0)	3321108
18	0.0	0.0	0.0	chr6	4819164	4819183	(165986796)	+	(GT)n	Simple_repeat	1	20	(0)	3321109
2084	23.6	10.2	2.3	chr6	4967641	4968028	(165837951)	+	L1ME3A	LINE/L1	5714	6151	(22)	3321273
41	0.0	0.0	0.0	chr6	4968029	4968063	(165837916)	+	(TC)n	Simple_repeat	1	35	(0)	3321277
19	0.0	0.0	0.0	chr6	4968064	4968084	(165837895)	+	(AT)n	Simple_repeat	1	21	(0)	3321278
2275	10.9	0.0	0.0	chr6	4968085	4968386	(165837593)	C	AluSg	SINE/Alu	(8)	302	1	3321279
34	15.3	1.5	0.0	chr6	5162474	5162538	(165643441)	+	GA-rich	Low_complexity	1	66	(0)	3321623
28	0.0	0.0	0.0	chr6	5778072	5778098	(165027881)	+	(T)n	Simple_repeat	1	27	(0)	3322544
54	2.0	0.0	0.0	chr6	5778130	5778180	(165027799)	+	(TC)n	Simple_repeat	1	51	(0)	3322545
862	17.9	2.2	0.0	chr6	5778181	5778314	(165027665)	C	FLAM_C	SINE/Alu	(6)	137	1	3322546
12	26.6	0.0	0.0	chr6	6004827	6004863	(164801116)	+	(CATT)n	Simple_repeat	1	37	(0)	3322873
45	13.0	1.3	0.0	chr6	6006881	6006957	(164799022)	+	(AGAG)n	Simple_repeat	1	78	(0)	3322875
37	0.0	0.0	0.0	chr6	6007567	6007598	(164798381)	+	(CA)n	Simple_repeat	1	32	(0)	3322876
23	28.7	3.8	0.0	chr6	6007601	6007680	(164798299)	+	(CG)n	Simple_repeat	1	83	(0)	3322877
2640	5.6	0.0	0.0	chr6	6682801	6683103	(164122876)	+	AluSq	SINE/Alu	1	303	(10)	3323751
65	23.4	3.6	0.0	chr6	6683120	6683285	(164122694)	+	(TC)n	Simple_repeat	1	172	(0)	3323752
22	10.1	0.0	0.0	chr6	7046432	7046463	(163759516)	+	(GA)n	Simple_repeat	1	32	(0)	3324471
1220	12.9	0.0	0.6	chr6	7046572	7046741	(163759238)	+	AluSc8	SINE/Alu	119	287	(24)	3324472
34	2.8	0.0	0.0	chr6	7107674	7107709	(163698270)	+	(CGC)n	Simple_repeat	1	36	(0)	3324624
15	18.8	7.0	1.6	chr6	7541463	7541519	(163264460)	+	(GGCGCAG)n	Simple_repeat	1	61	(0)	3325356
876	25.1	0.5	5.0	chr6	7592462	7592683	(163213296)	C	MIR	SINE/MIR	(0)	262	51	3325416
599	30.4	16.2	4.7	chr6	7592732	7593580	(163212399)	C	L2c	LINE/L2	(650)	2769	1804	3325415
15	13.7	2.8	5.4	chr6	7830152	7830187	(162975792)	+	(CT)n	Simple_repeat	1	37	(0)	3325790
52	6.3	0.0	0.0	chr6	8877096	8877162	(161928817)	+	(GA)n	Simple_repeat	1	67	(0)	3327334
65	9.3	0.0	0.0	chr6	9470805	9470895	(161335084)	+	(AG)n	Simple_repeat	1	91	(0)	3328114
465	32.6	13.7	6.4	chr6	9470950	9471513	(161334466)	C	L2a	LINE/L2	(644)	2775	2164	3328110
12	26.3	0.0	4.1	chr6	10389854	10389902	(160416077)	+	(CTCTCT)n	Simple_repeat	1	49	(0)	3329430
22	3.6	3.5	0.0	chr6	10397215	10397243	(160408736)	+	(AG)n	Simple_repeat	1	30	(0)	3329436
23	8.7	2.6	0.0	chr6	10399884	10399896	(160406083)	+	(TG)n	Simple_repeat	1	14	(0)	3329441
29	0.0	0.0	0.0	chr6	10399897	10399921	(160406058)	+	(TC)n	Simple_repeat	1	25	(0)	3329442
23	8.7	2.6	0.0	chr6	10399922	10399945	(160406034)	+	(TG)n	Simple_repeat	1	24	(0)	3329443
18	27.0	0.0	0.0	chr6	10412177	10412229	(160393750)	+	(GAGC)n	Simple_repeat	1	53	(0)	3329448
14	26.4	5.1	0.0	chr6	10412300	10412358	(160393621)	+	A-rich	Low_complexity	1	62	(0)	3329449
54	31.0	3.2	1.8	chr6	10412302	10412397	(160393582)	+	GA-rich	Low_complexity	1	269	(0)	3329450
31	26.7	2.9	5.7	chr6	10412398	10412567	(160393412)	+	G-rich	Low_complexity	1	175	(0)	3329451
50	0.0	0.0	0.0	chr6	10423592	10423634	(160382345)	+	(TG)n	Simple_repeat	1	43	(0)	3329457
368	33.5	7.8	1.4	chr6	10582820	10583034	(160222945)	C	MIR	SINE/MIR	(0)	262	33	3329787
324	29.3	4.1	1.7	chr6	10583064	10583181	(160222798)	+	MIR3	SINE/MIR	65	185	(23)	3329788
24	11.0	2.6	0.0	chr6	11119245	11119283	(159686696)	+	(CT)n	Simple_repeat	1	40	(0)	3330762
191	29.6	1.9	13.6	chr6	11119290	11119372	(159686607)	C	L2	LINE/L2	(1006)	2413	2344	3330763
2617	6.8	0.0	0.0	chr6	11119373	11119668	(159686311)	+	AluY	SINE/Alu	1	296	(15)	3330764
29	21.6	3.2	3.1	chr6	11210713	11210766	(159595213)	+	GA-rich	Low_complexity	1	55	(0)	3330899
30	0.0	0.0	0.0	chr6	11210767	11210792	(159595187)	+	(GA)n	Simple_repeat	1	26	(0)	3330900
29	21.6	3.2	3.1	chr6	11210793	11210832	(159595147)	+	GA-rich	Low_complexity	56	94	(0)	3330901
1966	14.5	2.4	5.4	chr6	11590777	11591056	(159214923)	C	MER1B	DNA/hAT-Charlie	(0)	339	69	3331436
2545	3.9	0.0	0.3	chr6	11591057	11591363	(159214616)	C	AluY	SINE/Alu	(0)	311	1	3331437
2012	28.9	10.9	4.9	chr6	12103842	12104362	(158701617)	C	L1MEg	LINE/L1	(4590)	1494	901	3332197
41	4.2	1.9	1.9	chr6	12104363	12104414	(158701565)	+	(TC)n	Simple_repeat	1	53	(0)	3332198
2012	28.9	10.9	4.9	chr6	12104415	12104431	(158701548)	C	L1MEg	LINE/L1	(5184)	900	888	3332197
38	13.5	0.0	1.5	chr6	12287623	12287648	(158518331)	+	(AC)n	Simple_repeat	1	25	(0)	3332452
53	3.1	4.6	0.0	chr6	12287649	12287713	(158518266)	+	(TC)n	Simple_repeat	1	68	(0)	3332453
38	13.5	0.0	1.5	chr6	12287714	12287754	(158518225)	+	(AC)n	Simple_repeat	2	42	(0)	3332454
16	0.0	0.0	0.0	chr6	12287756	12287773	(158518206)	+	(GC)n	Simple_repeat	1	18	(0)	3332455
2180	11.3	1.7	0.0	chr6	12347525	12347815	(158458164)	+	AluSz	SINE/Alu	1	296	(16)	3332547
20	0.0	0.0	0.0	chr6	12347816	12347837	(158458142)	+	(GA)n	Simple_repeat	1	22	(0)	3332548
172	9.7	1.1	1.5	chr6	12348019	12348287	(158457692)	+	(TTTC)n	Simple_repeat	1	272	(0)	3332549
49	2.2	0.0	0.0	chr6	12364492	12364537	(158441442)	+	(TG)n	Simple_repeat	1	46	(0)	3332575
42	7.6	0.0	0.0	chr6	12364538	12364593	(158441386)	+	(AG)n	Simple_repeat	1	56	(0)	3332576
2467	13.0	1.8	0.3	chr6	12364594	12364971	(158441008)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	1	3332577
29	6.1	0.0	0.0	chr6	12406452	12406485	(158399494)	+	(TC)n	Simple_repeat	1	34	(0)	3332637
1530	16.4	10.2	1.4	chr6	12406486	12406781	(158399198)	C	7SK	RNA	(6)	325	1	3332638
778	17.8	0.6	11.5	chr6	12583841	12583965	(158222014)	+	FRAM	SINE/Alu	1	125	(51)	3332886
36	0.0	0.0	0.0	chr6	12583966	12583996	(158221983)	+	(AG)n	Simple_repeat	1	31	(0)	3332887
778	17.8	0.6	11.5	chr6	12583997	12584044	(158221935)	+	FRAM	SINE/Alu	126	155	(21)	3332886
2134	11.3	0.7	1.0	chr6	12829673	12829965	(157976014)	+	AluSx1	SINE/Alu	1	292	(20)	3333258
111	14.5	0.5	3.6	chr6	12829966	12830158	(157975821)	+	GA-rich	Low_complexity	25	212	(0)	3333259
3857	25.5	4.8	6.6	chr6	13106694	13107136	(157698843)	C	L1MEc	LINE/L1	(2144)	4175	3784	3333706
1731	17.8	2.5	0.4	chr6	13107137	13107411	(157698568)	C	AluJo	SINE/Alu	(31)	281	1	3333708
1723	18.5	2.0	0.3	chr6	13390445	13390742	(157415237)	+	AluJo	SINE/Alu	2	304	(8)	3334170
31	3.3	0.0	0.0	chr6	13390750	13390780	(157415199)	+	(AG)n	Simple_repeat	1	31	(0)	3334171
54	0.0	0.0	0.0	chr6	13390781	13390829	(157415150)	+	(AAGG)n	Simple_repeat	1	49	(0)	3334172
488	23.4	1.8	0.0	chr6	13390832	13390938	(157415041)	+	MIRb	SINE/MIR	153	261	(7)	3334173
16	29.1	1.4	2.7	chr6	13629763	13629836	(157176143)	+	A-rich	Low_complexity	1	75	(0)	3334606
39	4.6	0.0	2.1	chr6	13629875	13629921	(157176058)	+	(TC)n	Simple_repeat	1	47	(0)	3334607
20	0.0	0.0	0.0	chr6	13629922	13629943	(157176036)	+	(GT)n	Simple_repeat	1	22	(0)	3334608
52	0.0	0.0	0.0	chr6	13769034	13769080	(157036899)	+	(CTCC)n	Simple_repeat	1	47	(0)	3334866
29	0.0	0.0	0.0	chr6	13769081	13769112	(157036867)	+	(TC)n	Simple_repeat	1	32	(0)	3334867
713	13.0	11.4	4.3	chr6	13769114	13769251	(157036728)	C	AluJb	SINE/Alu	(21)	291	143	3334868
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
15	20.1	3.6	3.5	chr6	14083924	14083978	(156722001)	+	(CTCAG)n	Simple_repeat	1	57	(0)	3335436
39	2.7	0.0	0.0	chr6	14084194	14084231	(156721748)	+	(CT)n	Simple_repeat	1	38	(0)	3335437
38	17.5	1.4	0.0	chr6	14084232	14084303	(156721676)	+	(AT)n	Simple_repeat	1	73	(0)	3335438
34	5.6	0.0	0.0	chr6	14154898	14154935	(156651044)	+	(TC)n	Simple_repeat	1	38	(0)	3335546
29	10.2	0.0	0.0	chr6	14702826	14702867	(156103112)	+	(AG)n	Simple_repeat	1	42	(0)	3336425
219	28.4	5.6	0.0	chr6	14702960	14703026	(156102953)	+	MIR	SINE/MIR	98	168	(94)	3336426
2303	10.7	0.0	0.3	chr6	15043647	15043946	(155762033)	+	AluSq2	SINE/Alu	1	299	(14)	3337083
326	22.4	0.0	0.0	chr6	15044142	15044208	(155761771)	+	MIR	SINE/MIR	196	262	(0)	3337082
554	33.3	11.2	0.9	chr6	15061244	15061585	(155744394)	C	L2b	LINE/L2	(3)	3372	2991	3337126
2310	10.8	0.3	0.0	chr6	15061591	15061896	(155744083)	C	AluSz6	SINE/Alu	(4)	308	2	3337127
493	28.0	12.9	4.2	chr6	15282240	15282517	(155523462)	C	L1ME3G	LINE/L1	(636)	5606	5295	3337717
44	20.2	5.4	0.0	chr6	15282518	15282628	(155523351)	+	(CT)n	Simple_repeat	1	117	(0)	3337720
2174	8.1	1.4	0.0	chr6	15282629	15282900	(155523079)	C	AluSp	SINE/Alu	(37)	276	1	3337721
47	0.0	0.0	0.0	chr6	15300684	15300723	(155505256)	+	(TG)n	Simple_repeat	1	40	(0)	3337756
30	14.8	1.9	0.0	chr6	15300724	15300776	(155505203)	+	GA-rich	Low_complexity	1	54	(0)	3337757
1425	17.7	3.2	3.5	chr6	15406978	15407260	(155398719)	+	AluJo	SINE/Alu	1	282	(30)	3337911
244	13.3	0.0	11.8	chr6	15407288	15407338	(155398641)	+	MER5A	DNA/hAT-Charlie	20	64	(125)	3337912
230	16.7	0.0	0.0	chr6	15407355	15407390	(155398589)	+	MER5A	DNA/hAT-Charlie	153	188	(1)	3337913
12	16.6	0.0	0.0	chr6	15407480	15407506	(155398473)	+	(TCAT)n	Simple_repeat	1	27	(0)	3337914
829	26.4	15.3	3.5	chr6	15678002	15678232	(155127747)	+	MLT1H1	LTR/ERVL-MaLR	272	554	(1)	3338241
2001	13.5	0.0	4.2	chr6	15820223	15820534	(154985445)	C	AluSz6	SINE/Alu	(12)	300	2	3338500
32	17.9	1.1	5.4	chr6	15820559	15820649	(154985330)	+	A-rich	Low_complexity	1	92	(0)	3338501
4575	12.0	1.5	2.4	chr6	15956257	15956973	(154849006)	C	MER50	LTR/ERV1	(23)	711	1	3338754
2333	10.0	0.0	1.6	chr6	16210836	16211146	(154594833)	C	AluSz	SINE/Alu	(6)	306	1	3339156
44	16.5	1.2	0.0	chr6	16211183	16211263	(154594716)	+	(CT)n	Simple_repeat	1	82	(0)	3339157
586	26.8	1.4	0.7	chr6	16211266	16211408	(154594571)	+	MLT1A	LTR/ERVL-MaLR	173	316	(58)	3339158
30	3.4	0.0	0.0	chr6	16420826	16420855	(154385124)	+	(TC)n	Simple_repeat	1	30	(0)	3339505
715	25.7	1.2	0.0	chr6	16568405	16568575	(154237404)	C	Tigger16b	DNA/TcMar-Tigger	(0)	336	164	3339705
26	17.1	3.4	0.0	chr6	16761548	16761606	(154044373)	+	(CGCT)n	Simple_repeat	1	61	(0)	3340018
37	2.9	0.0	0.0	chr6	16902695	16902730	(153903249)	+	(AG)n	Simple_repeat	1	36	(0)	3340225
24	0.0	0.0	0.0	chr6	16902731	16902757	(153903222)	+	(TG)n	Simple_repeat	1	27	(0)	3340226
160	24.8	2.3	4.2	chr6	16969645	16970176	(153835803)	+	GA-rich	Low_complexity	1	544	(0)	3340346
43	0.0	0.0	0.0	chr6	17002545	17002581	(153803398)	+	(TC)n	Simple_repeat	1	37	(0)	3340399
19	17.9	5.8	1.8	chr6	17002605	17002656	(153803323)	+	(TC)n	Simple_repeat	1	55	(0)	3340399
33	0.0	0.0	0.0	chr6	17094056	17094083	(153711896)	+	(TC)n	Simple_repeat	1	28	(0)	3340523
2142	10.5	0.7	1.4	chr6	17405101	17405394	(153400585)	+	AluSx1	SINE/Alu	1	292	(20)	3341103
1798	15.1	3.8	4.1	chr6	17405395	17405498	(153400481)	C	MER44A	DNA/TcMar-Tigger	(123)	216	103	3341102
37	0.0	0.0	0.0	chr6	17405499	17405530	(153400449)	+	(TC)n	Simple_repeat	1	32	(0)	3341104
1798	15.1	3.8	4.1	chr6	17405531	17405628	(153400351)	C	MER44A	DNA/TcMar-Tigger	(237)	102	3	3341102
287	18.6	1.7	0.0	chr6	17405633	17405691	(153400288)	C	L1MEf	LINE/L1	(4994)	1646	1587	3341105
17	23.1	0.0	0.0	chr6	17405692	17405727	(153400252)	+	(T)n	Simple_repeat	1	36	(0)	3341106
295	22.5	9.8	3.2	chr6	17497697	17497820	(153308159)	+	Tigger10	DNA/TcMar-Tigger	827	959	(885)	3341260
1023	31.6	5.3	1.6	chr6	17498051	17498487	(153307492)	+	Tigger10	DNA/TcMar-Tigger	1253	1706	(138)	3341261
257	20.2	6.7	10.6	chr6	17935472	17935565	(152870414)	+	MER5B	DNA/hAT-Charlie	89	178	(0)	3342086
18	0.0	0.0	0.0	chr6	18111263	18111282	(152694697)	+	(TC)n	Simple_repeat	1	20	(0)	3342461
20	23.4	1.2	6.9	chr6	18155430	18155515	(152650464)	+	(GGC)n	Simple_repeat	1	87	(0)	3342550
48	2.1	2.0	0.0	chr6	19317325	19317373	(151488606)	+	(GA)n	Simple_repeat	1	50	(0)	3344257
47	4.2	0.0	0.0	chr6	19901304	19901352	(150904627)	+	(TC)n	Simple_repeat	1	49	(0)	3345078
1048	12.7	0.0	0.0	chr6	20168317	20168458	(150637521)	+	AluSc8	SINE/Alu	134	275	(36)	3345520
146	15.4	4.7	3.2	chr6	20168492	20168850	(150637129)	+	GA-rich	Low_complexity	1	376	(0)	3345521
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
96	23.9	1.8	0.0	chr6	20672121	20672348	(150133631)	+	(TCTCTC)n	Simple_repeat	1	232	(0)	3346446
2071	14.1	2.3	1.0	chr6	20672349	20672654	(150133325)	C	AluSz6	SINE/Alu	(2)	310	1	3346447
22	12.8	0.0	0.0	chr6	21193305	21193338	(149612641)	+	(AG)n	Simple_repeat	1	34	(0)	3347254
29	0.0	0.0	0.0	chr6	21297654	21297678	(149508301)	+	(TC)n	Simple_repeat	1	25	(0)	3347421
2061	9.7	4.6	0.0	chr6	21464556	21464824	(149341155)	+	AluSg	SINE/Alu	1	282	(28)	3347684
52	0.0	0.0	0.0	chr6	21464825	21464871	(149341108)	+	(AAAT)n	Simple_repeat	1	47	(0)	3347685
1467	28.0	6.9	6.4	chr6	21464872	21465332	(149340647)	+	L2a	LINE/L2	2826	3252	(174)	3347682
21	7.5	0.0	0.0	chr6	21594265	21594292	(149211687)	+	(GA)n	Simple_repeat	1	28	(0)	3347915
72	20.5	0.7	0.0	chr6	21641211	21641357	(149164622)	+	(TCTC)n	Simple_repeat	1	148	(0)	3348011
302	8.5	0.0	0.0	chr6	21641358	21641569	(149164410)	C	AluSx	SINE/Alu	(10)	302	91	3348012
29	2.8	2.7	0.0	chr6	21894454	21894490	(148911489)	+	(GA)n	Simple_repeat	1	38	(0)	3348496
436	29.8	3.2	6.3	chr6	21894568	21894789	(148911190)	+	MIRc	SINE/MIR	3	217	(51)	3348497
13	4.2	8.0	0.0	chr6	21953991	21954015	(148851964)	+	(GTGCA)n	Simple_repeat	1	27	(0)	3348606
29	8.6	6.2	2.9	chr6	23688846	23688913	(147117066)	+	(GAGC)n	Simple_repeat	1	70	(0)	3350874
1553	15.3	10.1	5.6	chr6	24220685	24220879	(146585100)	C	THE1D	LTR/ERVL-MaLR	(3)	378	186	3351561
31	9.1	0.0	0.0	chr6	24220880	24220926	(146585053)	+	(GAGC)n	Simple_repeat	1	47	(0)	3351562
1553	15.3	10.1	5.6	chr6	24220927	24221090	(146584889)	C	THE1D	LTR/ERVL-MaLR	(196)	185	1	3351561
485	7.5	6.8	2.0	chr6	24358693	24359596	(146446383)	+	(TATATAT)n	Simple_repeat	1	965	(0)	3351758
781	18.4	0.0	0.0	chr6	24359617	24359730	(146446249)	+	AluJo	SINE/Alu	3	116	(196)	3351759
16	8.3	0.0	0.0	chr6	24359731	24359756	(146446223)	+	(GGAA)n	Simple_repeat	1	26	(0)	3351760
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
1982	18.0	2.4	0.3	chr6	24536196	24536529	(146269450)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	3352108
34	0.0	0.0	0.0	chr6	24932315	24932343	(145873636)	+	(TG)n	Simple_repeat	1	29	(0)	3352785
26	16.0	2.0	0.0	chr6	24932346	24932394	(145873585)	+	GA-rich	Low_complexity	1	50	(0)	3352786
19	13.8	2.5	0.0	chr6	24932427	24932466	(145873513)	+	(TCTCTT)n	Simple_repeat	1	41	(0)	3352787
2425	10.6	0.0	0.0	chr6	24935026	24935337	(145870642)	+	AluSx1	SINE/Alu	1	312	(0)	3352790
35	16.6	0.0	0.0	chr6	24935341	24935407	(145870572)	+	GA-rich	Low_complexity	1	67	(0)	3352791
258	37.1	6.6	3.8	chr6	25274099	25274437	(145531542)	+	L2	LINE/L2	1837	2185	(1234)	3353372
36	0.0	0.0	0.0	chr6	25274452	25274482	(145531497)	+	(TC)n	Simple_repeat	1	31	(0)	3353373
667	22.3	6.6	4.8	chr6	25274487	25274693	(145531286)	+	MLT1F	LTR/ERVL-MaLR	6	216	(344)	3353374
1848	18.0	0.0	0.0	chr6	25490416	25490698	(145315281)	+	AluJb	SINE/Alu	1	283	(29)	3353709
488	35.3	4.9	0.8	chr6	25750134	25750527	(145055452)	+	MLT1I-int	LTR/ERVL-MaLR	50	460	(927)	3354057
31	0.0	0.0	0.0	chr6	25750634	25750660	(145055319)	+	(AG)n	Simple_repeat	1	27	(0)	3354058
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
1499	23.8	9.0	6.9	chr6	26029259	26029778	(144776201)	C	MER34	LTR/ERV1	(0)	542	11	3354515
732	1.2	0.0	0.0	chr6	26312596	26312677	(144493302)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3354998
651	0.0	0.0	0.0	chr6	26313124	26313195	(144492784)	C	tRNA-Met-i	tRNA	(3)	72	1	3354999
664	1.4	0.0	0.0	chr6	26322818	26322890	(144483089)	+	tRNA-Arg-CGA	tRNA	1	73	(3)	3355024
443	24.1	3.3	12.6	chr6	26323092	26323290	(144482689)	+	MER5A	DNA/hAT-Charlie	9	188	(1)	3355025
30	11.5	0.0	2.0	chr6	26457698	26457746	(144348233)	+	(AG)n	Simple_repeat	1	49	(0)	3355268
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
1192	16.3	8.4	0.0	chr6	26552094	26552332	(144253647)	+	Tigger7	DNA/TcMar-Tigger	7	267	(2224)	3355452
665	0.0	0.0	0.0	chr6	26556546	26556619	(144249360)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	3355461
2069	10.8	0.3	3.3	chr6	26568131	26568437	(144237542)	+	AluSz6	SINE/Alu	1	298	(14)	3355490
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
470	34.2	1.0	5.7	chr6	26863643	26863853	(143942126)	+	MIR	SINE/MIR	2	202	(60)	3355942
17	24.0	0.0	0.0	chr6	26863888	26863931	(143942048)	+	GA-rich	Low_complexity	1	44	(0)	3355943
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
23	0.0	0.0	0.0	chr6	27220114	27220138	(143585841)	+	(TG)n	Simple_repeat	1	25	(0)	3356507
40	0.0	0.0	0.0	chr6	27220139	27220172	(143585807)	+	(GA)n	Simple_repeat	1	34	(0)	3356508
1902	11.7	2.2	0.4	chr6	27220173	27220445	(143585534)	C	AluSx1	SINE/Alu	(34)	278	1	3356509
677	0.0	0.0	0.0	chr6	27237570	27237644	(143568335)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356559
2992	10.9	4.6	7.7	chr6	27241372	27241890	(143564089)	+	LTR22C0	LTR/ERVK	1	502	(0)	3356566
11	26.7	4.5	2.9	chr6	27296365	27296430	(143509549)	+	GA-rich	Low_complexity	1	69	(0)	3356669
650	0.0	0.0	0.0	chr6	27332985	27333056	(143472923)	C	tRNA-Met-i	tRNA	(3)	72	1	3356727
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
88	30.1	2.2	2.4	chr6	27500145	27500466	(143305513)	+	A-rich	Low_complexity	1	329	(0)	3357000
787	26.4	2.5	1.0	chr6	27521240	27521438	(143284541)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	173	3357036
17	8.8	0.0	0.0	chr6	27521439	27521462	(143284517)	+	(AG)n	Simple_repeat	1	24	(0)	3357037
1577	6.7	0.0	0.0	chr6	27548668	27548846	(143257133)	+	AluYh3	SINE/Alu	133	311	(0)	3357095
733	26.1	10.3	2.1	chr6	27588446	27588821	(143217158)	C	LTR16	LTR/ERVL	(0)	489	32	3357172
1693	28.8	8.4	3.1	chr6	27588823	27590056	(143215923)	+	L1MC4a	LINE/L1	5255	5906	(1976)	3357173
2277	12.7	0.0	0.9	chr6	27602220	27602534	(143203445)	C	AluSx1	SINE/Alu	(0)	312	1	3357201
595	0.0	0.0	22.2	chr6	27602568	27602675	(143203304)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357202
31	0.0	0.0	0.0	chr6	27651559	27651585	(143154394)	+	(GT)n	Simple_repeat	1	27	(0)	3357301
252	23.7	0.0	6.3	chr6	27651713	27651775	(143154204)	C	MLT2D	LTR/ERVL	(65)	495	437	3357302
633	2.7	0.0	0.0	chr6	27668583	27668657	(143137322)	+	tRNA-Ile-ATT	tRNA	1	75	(2)	3357335
2029	11.5	2.9	2.0	chr6	27668842	27669146	(143136833)	+	AluSp	SINE/Alu	1	308	(5)	3357336
1009	24.6	16.1	4.0	chr6	27672796	27673090	(143132889)	+	L2	LINE/L2	1073	1426	(1993)	3357342
400	20.2	11.1	0.8	chr6	27747701	27747788	(143058191)	C	AluSx	SINE/Alu	(219)	83	1	3357520
14	11.6	0.0	3.3	chr6	27747789	27747818	(143058161)	+	(TTCTT)n	Simple_repeat	1	30	(0)	3357521
2089	13.2	1.3	1.0	chr6	27747819	27747832	(143058147)	C	AluSz6	SINE/Alu	(0)	312	299	3357522
34	0.0	0.0	0.0	chr6	27747833	27747861	(143058118)	+	(TC)n	Simple_repeat	1	29	(0)	3357523
2089	13.2	1.3	1.0	chr6	27747862	27748157	(143057822)	C	AluSz6	SINE/Alu	(14)	298	1	3357522
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
573	7.0	0.0	0.0	chr6	27791357	27791427	(143014552)	C	tRNA-Gln-CAA	tRNA	(4)	71	1	3357599
619	6.8	0.0	0.0	chr6	28474552	28474625	(142331354)	C	tRNA-Thr-ACG_	tRNA	(3)	74	1	3358684
666	0.0	0.0	0.0	chr6	28589379	28589450	(142216529)	+	tRNA-Gln-CAA	tRNA	1	72	(3)	3358869
724	1.2	0.0	0.0	chr6	28597340	28597421	(142208558)	C	tRNA-Ser-AGY	tRNA	(3)	82	1	3358882
628	4.0	0.0	0.0	chr6	28607156	28607230	(142198749)	+	tRNA-Ala-GCY_	tRNA	1	75	(0)	3358903
585	6.9	0.0	0.0	chr6	28643445	28643516	(142162463)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3358957
629	4.0	0.0	0.0	chr6	28726018	28726091	(142079888)	+	tRNA-Thr-ACY_	tRNA	1	74	(3)	3359101
589	6.8	0.0	0.0	chr6	28747744	28747816	(142058163)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359146
2799	16.1	0.6	2.3	chr6	28747872	28748347	(142057632)	+	MER1A	DNA/hAT-Charlie	62	529	(0)	3359147
643	0.0	0.0	0.0	chr6	28758364	28758435	(142047544)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359169
60739	13.7	1.0	1.0	chr6	28774242	28775957	(142030022)	C	HERVS71-int	LTR/ERV1	(7286)	1692	4	3359190
391	23.3	0.0	0.0	chr6	28778766	28778838	(142027141)	C	tRNA-Ala-GCY_	tRNA	(2)	73	1	3359197
67	0.0	0.0	0.0	chr6	28778966	28779022	(142026957)	+	(CT)n	Simple_repeat	1	57	(0)	3359198
2387	7.2	2.3	0.0	chr6	28796196	28796488	(142009491)	+	AluSg7	SINE/Alu	2	301	(8)	3359236
40	19.5	1.2	0.0	chr6	28796489	28796572	(142009407)	+	GA-rich	Low_complexity	1	85	(0)	3359237
40	20.7	4.7	0.9	chr6	28824338	28824444	(141981535)	+	(AT)n	Simple_repeat	1	112	(0)	3359294
28	11.6	2.0	2.0	chr6	28824444	28824492	(141981487)	+	GA-rich	Low_complexity	1	50	(0)	3359295
479	18.6	6.7	0.0	chr6	28824493	28824589	(141981390)	C	AluYj4	SINE/Alu	(30)	281	178	3359296
864	28.1	12.3	3.7	chr6	28839519	28840596	(141965383)	+	L1MD	LINE/L1	2682	3865	(2281)	3359319
1808	14.1	0.0	0.4	chr6	28893103	28893364	(141912615)	+	AluSz	SINE/Alu	32	292	(20)	3359401
45	21.7	1.7	2.5	chr6	28893366	28893483	(141912496)	+	GA-rich	Low_complexity	1	120	(0)	3359402
636	2.8	0.0	0.0	chr6	28941601	28941672	(141864307)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3359511
528	25.0	3.5	1.4	chr6	29400224	29400365	(141405614)	C	MLT1G3	LTR/ERVL-MaLR	(1)	594	450	3360063
50	2.2	0.0	0.0	chr6	29400371	29400417	(141405562)	+	(CT)n	Simple_repeat	1	47	(0)	3360064
3860	18.1	0.1	0.9	chr6	29964271	29964917	(140841062)	+	HERVP71A-int	LTR/ERV1	1116	1757	(5833)	3360889
392	15.7	1.4	0.0	chr6	29964918	29964987	(140840992)	+	LTR18B	LTR/ERVL	332	402	(212)	3360891
391	16.9	3.5	2.4	chr6	29965034	29965118	(140840861)	+	LTR18B	LTR/ERVL	268	353	(261)	3360892
5130	16.5	2.1	1.4	chr6	29966398	29967123	(140838856)	+	HERVP71A-int	LTR/ERV1	3758	4492	(3098)	3360889
383	18.4	22.1	0.9	chr6	30154611	30154720	(140651259)	+	MER5A1	DNA/hAT-Charlie	23	162	(4)	3361160
49	2.2	0.0	0.0	chr6	30439964	30440009	(140365970)	+	(TC)n	Simple_repeat	1	46	(0)	3361595
503	26.7	17.4	3.6	chr6	30440018	30440437	(140365542)	+	L2	LINE/L2	1323	1812	(1607)	3361596
2430	8.0	0.6	0.3	chr6	30907508	30907819	(139898160)	C	AluSq2	SINE/Alu	(0)	313	1	3362482
435	32.6	9.4	5.3	chr6	31072229	31072698	(139733281)	+	LTR104_Mam	LTR/Gypsy	648	1138	(371)	3362748
373	34.8	8.2	2.0	chr6	31072812	31073063	(139732916)	+	L1ME4a	LINE/L1	5619	5887	(237)	3362749
280	3.1	0.0	0.0	chr6	31073497	31073528	(139732451)	C	MLT2C1	LTR/ERVL	(0)	556	525	3362752
24	3.5	0.0	0.0	chr6	31073532	31073560	(139732419)	+	(CT)n	Simple_repeat	1	29	(0)	3362753
1164	22.9	10.0	2.6	chr6	31073569	31073916	(139732063)	C	MLT2C1	LTR/ERVL	(21)	546	7	3362752
577	11.8	7.2	4.0	chr6	31389735	31389858	(139416121)	+	MER5A	DNA/hAT-Charlie	3	130	(36)	3363258
91	4.3	0.0	0.0	chr6	31389883	31389977	(139416002)	+	(TC)n	Simple_repeat	1	95	(0)	3363259
50	26.5	3.4	2.2	chr6	31588064	31588242	(139217737)	+	GA-rich	Low_complexity	1	185	(0)	3363555
678	21.9	0.8	0.0	chr6	31588252	31588374	(139217605)	+	FLAM_A	SINE/Alu	2	125	(17)	3363556
54	3.8	0.0	0.0	chr6	31588375	31588429	(139217550)	+	(AG)n	Simple_repeat	1	55	(0)	3363557
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
2346	8.3	1.0	1.3	chr6	31864064	31864375	(138941604)	C	AluSx1	SINE/Alu	(1)	311	1	3364053
36	2.9	0.0	0.0	chr6	32367244	32367278	(138438701)	+	(AG)n	Simple_repeat	1	35	(0)	3364802
32	16.1	4.2	1.4	chr6	32415903	32415973	(138390006)	+	GA-rich	Low_complexity	1	74	(0)	3364875
15714	12.4	2.2	0.2	chr6	32560088	32563297	(138242682)	C	HERVK3-int	LTR/ERVK	(2)	7200	3927	3365077
19	20.2	2.1	2.1	chr6	32583868	32583914	(138222065)	+	(CA)n	Simple_repeat	1	48	(0)	3365100
31	9.3	0.0	0.0	chr6	32583974	32584017	(138221962)	+	(CT)n	Simple_repeat	1	44	(0)	3365101
48	0.0	0.0	0.0	chr6	32584018	32584058	(138221921)	+	(CA)n	Simple_repeat	1	41	(0)	3365102
12	17.0	9.2	4.2	chr6	33204797	33204861	(137601118)	+	(CTCTGACC)n	Simple_repeat	1	71	(0)	3365972
31	0.0	0.0	0.0	chr6	33205972	33205998	(137599981)	+	(AG)n	Simple_repeat	1	27	(0)	3365973
190	24.4	0.0	0.0	chr6	33206002	33206042	(137599937)	+	MIRb	SINE/MIR	214	254	(14)	3365974
83	18.2	2.5	5.6	chr6	33420013	33420256	(137385723)	+	(CCT)n	Simple_repeat	1	250	(0)	3366422
14	13.0	6.5	4.1	chr6	33425973	33426018	(137379961)	+	G-rich	Low_complexity	1	49	(0)	3366427
959	29.2	13.3	3.9	chr6	33758899	33759278	(137046701)	+	HAL1	LINE/L1	2061	2486	(21)	3367090
324	27.7	6.9	9.2	chr6	33989409	33989506	(136816473)	+	MIRb	SINE/MIR	27	132	(136)	3367422
30	5.0	2.3	2.3	chr6	33989507	33989549	(136816430)	+	(TC)n	Simple_repeat	1	44	(0)	3367423
2011	15.2	0.0	0.3	chr6	33989550	33989846	(136816133)	C	AluJb	SINE/Alu	(16)	296	1	3367424
22	16.4	0.0	0.0	chr6	34033649	34033690	(136772289)	+	(CTCT)n	Simple_repeat	1	42	(0)	3367511
1362	26.9	14.8	1.0	chr6	34033691	34033725	(136772254)	+	L2	LINE/L2	2254	2294	(1125)	3367512
29	18.3	1.6	0.0	chr6	34145564	34145625	(136660354)	+	(GAGC)n	Simple_repeat	1	63	(0)	3367713
1784	17.7	0.0	3.0	chr6	34366098	34366402	(136439577)	+	AluJo	SINE/Alu	14	309	(3)	3368220
2046	14.6	0.3	0.3	chr6	34385683	34385983	(136419996)	C	AluSz6	SINE/Alu	(11)	301	1	3368261
690	28.3	48.5	5.3	chr6	34385984	34386173	(136419806)	C	Tigger13a	DNA/TcMar-Tigger	(402)	369	97	3368260
2387	8.4	0.0	3.1	chr6	34441175	34441495	(136364484)	+	AluY	SINE/Alu	1	311	(0)	3368401
43	15.3	0.0	0.0	chr6	34441541	34441616	(136364363)	+	(TCTCTC)n	Simple_repeat	1	76	(0)	3368402
1931	16.4	0.3	0.0	chr6	34441618	34441909	(136364070)	C	AluJb	SINE/Alu	(19)	293	1	3368403
223	27.3	8.3	0.0	chr6	34697140	34697205	(136108774)	C	MIR3	SINE/MIR	(56)	152	81	3368937
1976	10.8	2.0	3.6	chr6	34701024	34701330	(136104649)	C	AluSz	SINE/Alu	(9)	303	2	3368952
31	0.0	0.0	0.0	chr6	34701332	34701360	(136104619)	+	(TGCC)n	Simple_repeat	1	29	(0)	3368953
34	8.5	2.0	0.0	chr6	34701376	34701426	(136104553)	+	(CT)n	Simple_repeat	1	52	(0)	3368954
1831	14.2	0.0	3.2	chr6	34701439	34701720	(136104259)	C	AluJb	SINE/Alu	(39)	273	1	3368955
49	1.8	3.2	3.1	chr6	35182675	35182736	(135623243)	+	(AT)n	Simple_repeat	1	64	(0)	3369863
59	21.5	0.7	3.3	chr6	35213818	35213969	(135592010)	+	GA-rich	Low_complexity	1	153	(0)	3369926
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
919	27.2	7.7	5.8	chr6	35327881	35328313	(135477666)	C	MLT1N2	LTR/ERVL-MaLR	(4)	558	117	3370143
804	19.7	4.5	2.0	chr6	35328318	35328469	(135477510)	+	AluJb	SINE/Alu	156	311	(1)	3370144
40	2.5	0.0	0.0	chr6	35328509	35328549	(135477430)	+	(AGGA)n	Simple_repeat	1	41	(0)	3370145
285	34.6	3.6	1.2	chr6	35328550	35328707	(135477272)	+	L3	LINE/CR1	3742	3903	(196)	3370146
11	13.2	5.7	2.7	chr6	35496605	35496639	(135309340)	+	(GGACAGG)n	Simple_repeat	1	37	(0)	3370489
799	22.6	0.7	0.7	chr6	35629986	35630131	(135175848)	+	AluJo	SINE/Alu	133	278	(34)	3370793
36	13.0	2.9	0.0	chr6	35630132	35630199	(135175780)	+	GA-rich	Low_complexity	1	70	(0)	3370794
2321	8.9	1.0	0.0	chr6	35630268	35630559	(135175420)	+	AluSg	SINE/Alu	1	295	(15)	3370795
16	8.3	0.0	0.0	chr6	35728127	35728152	(135077827)	+	(CGGG)n	Simple_repeat	1	26	(0)	3371015
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
21	7.7	0.0	0.0	chr6	36069700	36069727	(134736252)	+	(CT)n	Simple_repeat	1	28	(0)	3371758
431	27.1	8.9	5.9	chr6	36123588	36123892	(134682087)	C	L2b	LINE/L2	(5)	3421	3076	3371838
21	11.4	6.1	1.9	chr6	36124030	36124078	(134681901)	+	GA-rich	Low_complexity	1	52	(0)	3371839
23	23.9	0.0	1.5	chr6	36124085	36124118	(134681861)	+	(TTTC)n	Simple_repeat	1	33	(0)	3371840
38	0.0	0.0	0.0	chr6	36124119	36124153	(134681826)	+	(CCTC)n	Simple_repeat	1	35	(0)	3371841
2291	10.8	0.0	0.0	chr6	36124154	36124479	(134681500)	C	AluSq	SINE/Alu	(0)	313	2	3371842
1797	13.7	0.0	0.4	chr6	36181966	36182220	(134623759)	+	AluJo	SINE/Alu	40	293	(19)	3371954
555	26.0	5.2	12.6	chr6	36182221	36182289	(134623690)	+	L1M5	LINE/L1	4077	4131	(2015)	3371950
42	4.7	0.0	0.0	chr6	36182309	36182353	(134623626)	+	(AG)n	Simple_repeat	1	45	(0)	3371955
2881	22.4	2.7	1.7	chr6	36182368	36183556	(134622423)	+	L1M3c	LINE/L1	1692	2886	(4221)	3371956
1958	14.6	0.0	3.2	chr6	36286677	36286984	(134518995)	C	AluJo	SINE/Alu	(13)	299	2	3372165
4008	19.2	4.8	4.6	chr6	36299634	36300178	(134505801)	C	L1MC3	LINE/L1	(8)	7777	7476	3372193
45	2.4	0.0	0.0	chr6	36300179	36300221	(134505758)	+	(GA)n	Simple_repeat	1	43	(0)	3372196
2112	7.2	0.0	0.0	chr6	36300222	36300471	(134505508)	C	AluY	SINE/Alu	(39)	272	23	3372197
28	0.0	0.0	2.9	chr6	36555900	36555933	(134250046)	+	(AC)n	Simple_repeat	1	34	(0)	3372761
66	1.7	0.0	0.0	chr6	36555934	36555994	(134249985)	+	(CT)n	Simple_repeat	1	61	(0)	3372762
471	24.6	7.8	0.8	chr6	36556012	36556142	(134249837)	+	MER103C	DNA/hAT-Charlie	86	226	(71)	3372763
54	0.0	0.0	0.0	chr6	36702294	36702339	(134103640)	+	(GA)n	Simple_repeat	1	46	(0)	3373122
54	8.7	4.7	0.0	chr6	36809198	36809283	(133996696)	+	(AG)n	Simple_repeat	1	90	(0)	3373334
1910	13.4	2.1	0.0	chr6	36809331	36809605	(133996374)	+	AluJo	SINE/Alu	32	312	(0)	3373335
25	12.0	0.0	2.1	chr6	37074614	37074660	(133731319)	+	(CTCT)n	Simple_repeat	1	47	(0)	3373875
1356	21.0	1.0	2.7	chr6	37191791	37192084	(133613895)	C	L1ME1	LINE/L1	(0)	6179	5891	3374195
194	21.9	2.4	0.0	chr6	37192094	37192134	(133613845)	C	L2a	LINE/L2	(19)	3407	3366	3374196
402	31.5	7.5	1.4	chr6	37192115	37192279	(133613700)	C	MIRc	SINE/MIR	(28)	180	4	3374197
7127	13.0	5.2	3.8	chr6	37221661	37222920	(133583059)	C	MER52C	LTR/ERV1	(0)	1278	1	3374268
1890	23.2	5.2	4.3	chr6	37240131	37240685	(133565294)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3374322
3974	24.3	3.5	1.9	chr6	37427422	37427986	(133377993)	C	L1MEf	LINE/L1	(4314)	2326	1759	3374673
2198	14.6	3.6	5.5	chr6	37427987	37428002	(133377977)	C	MER65A	LTR/ERV1	(0)	445	430	3374674
64	1.7	0.0	0.0	chr6	37428003	37428061	(133377918)	+	(AG)n	Simple_repeat	1	59	(0)	3374675
2198	14.6	3.6	5.5	chr6	37428062	37428445	(133377534)	C	MER65A	LTR/ERV1	(16)	429	54	3374674
16	21.4	1.9	3.7	chr6	37697791	37697843	(133108136)	+	G-rich	Low_complexity	1	54	(0)	3375150
18	15.0	0.0	7.7	chr6	37697920	37697971	(133108008)	+	(CTC)n	Simple_repeat	1	52	(0)	3375151
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
126	6.5	5.1	0.0	chr6	37698157	37698352	(133107627)	+	(TC)n	Simple_repeat	1	206	(0)	3375153
1994	13.4	0.3	1.1	chr6	38026422	38026730	(132779249)	C	AluSx3	SINE/Alu	(0)	311	1	3375801
22	0.0	0.0	0.0	chr6	38026788	38026811	(132779168)	+	(AG)n	Simple_repeat	1	24	(0)	3375802
36	6.4	2.0	0.0	chr6	38354893	38354941	(132451038)	+	(GA)n	Simple_repeat	1	50	(0)	3376238
1961	14.6	0.0	0.4	chr6	38487299	38487572	(132318407)	+	AluJb	SINE/Alu	1	273	(39)	3376469
44	19.2	4.4	2.1	chr6	38487574	38487712	(132318267)	+	GA-rich	Low_complexity	1	142	(0)	3376470
30	12.3	0.0	0.0	chr6	38779356	38779408	(132026571)	+	(TC)n	Simple_repeat	1	53	(0)	3376969
456	28.5	3.4	7.0	chr6	38974633	38974847	(131831132)	+	L2a	LINE/L2	3214	3420	(6)	3377291
273	28.6	6.2	0.0	chr6	38974885	38974975	(131831004)	C	MIRb	SINE/MIR	(35)	233	137	3377292
356	32.7	8.7	0.5	chr6	38978216	38978415	(131827564)	C	CR1_Mam	LINE/CR1	(669)	1535	1318	3377296
1946	16.8	0.3	0.0	chr6	39013570	39013854	(131792125)	+	AluJb	SINE/Alu	1	286	(26)	3377344
38	2.8	0.0	0.0	chr6	39013855	39013891	(131792088)	+	(AG)n	Simple_repeat	1	37	(0)	3377345
1188	25.0	1.6	4.8	chr6	39013892	39014043	(131791936)	+	L1ME3A	LINE/L1	6021	6158	(15)	3377343
282	29.9	10.7	3.8	chr6	39061240	39061448	(131744531)	+	MamRep434	DNA/TcMar-Tigger	109	333	(93)	3377403
1196	24.8	4.5	4.5	chr6	39148928	39149286	(131656693)	+	L1ME1	LINE/L1	14	372	(6028)	3377538
28	5.0	0.0	4.4	chr6	39149289	39149333	(131656646)	+	(TCTGTCTCTG)n	Simple_repeat	1	45	(0)	3377539
17	8.5	0.0	0.0	chr6	39149334	39149356	(131656623)	+	(TC)n	Simple_repeat	1	23	(0)	3377540
28	0.0	0.0	0.0	chr6	39149356	39149386	(131656593)	+	(CA)n	Simple_repeat	1	31	(0)	3377541
41	4.7	0.0	0.0	chr6	39149387	39149430	(131656549)	+	(AG)n	Simple_repeat	1	44	(0)	3377542
481	20.1	6.0	4.4	chr6	39149437	39149617	(131656362)	+	L1ME1	LINE/L1	387	560	(5840)	3377538
286	27.9	9.0	4.7	chr6	39217553	39217680	(131588299)	+	MIR3	SINE/MIR	66	199	(9)	3377667
42	15.0	1.4	0.0	chr6	39327279	39327352	(131478627)	+	GA-rich	Low_complexity	1	75	(0)	3377891
3178	20.8	5.7	4.6	chr6	39332247	39332770	(131473209)	C	L1MEc	LINE/L1	(5501)	899	374	3377900
30	6.0	7.5	0.0	chr6	39332771	39332823	(131473156)	+	(CT)n	Simple_repeat	1	57	(0)	3377902
3178	20.8	5.7	4.6	chr6	39332824	39333142	(131472837)	C	L1MEc	LINE/L1	(6027)	373	51	3377900
36	4.8	2.3	0.0	chr6	39568949	39568991	(131236988)	+	(TC)n	Simple_repeat	1	44	(0)	3378192
16	12.4	6.9	7.8	chr6	39792379	39792450	(131013529)	+	(AGCGCG)n	Simple_repeat	1	77	(0)	3378541
27	15.5	2.0	0.0	chr6	39792669	39792718	(131013261)	+	(TG)n	Simple_repeat	1	51	(0)	3378542
503	24.2	6.6	4.6	chr6	40533118	40533355	(130272624)	+	Charlie30a	DNA/hAT-Charlie	430	672	(119)	3379630
47	0.0	0.0	0.0	chr6	40533375	40533414	(130272565)	+	(AC)n	Simple_repeat	1	40	(0)	3379631
27	13.3	0.0	0.0	chr6	40533417	40533458	(130272521)	+	(GA)n	Simple_repeat	1	42	(0)	3379632
14	15.6	0.0	0.0	chr6	41073192	41073220	(129732759)	+	(GAGCC)n	Simple_repeat	1	29	(0)	3380581
1055	22.2	5.9	5.3	chr6	41154771	41155188	(129650791)	C	HAL1	LINE/L1	(1095)	1412	992	3380691
547	24.6	0.0	0.9	chr6	41155189	41155303	(129650676)	+	LTR40A1	LTR/ERVL	1	114	(470)	3380692
814	20.3	15.2	0.9	chr6	41155333	41155375	(129650604)	+	LTR40A1	LTR/ERVL	209	259	(325)	3380692
36	0.0	0.0	0.0	chr6	41155376	41155406	(129650573)	+	(TC)n	Simple_repeat	1	31	(0)	3380693
814	20.3	15.2	0.9	chr6	41155407	41155576	(129650403)	+	LTR40A1	LTR/ERVL	260	458	(126)	3380692
18	4.5	0.0	0.0	chr6	41371269	41371291	(129434688)	+	(CA)n	Simple_repeat	1	23	(0)	3381022
40	2.6	0.0	0.0	chr6	41371292	41371330	(129434649)	+	(AG)n	Simple_repeat	1	39	(0)	3381023
41	0.0	4.3	2.0	chr6	41432240	41432286	(129373693)	+	(TC)n	Simple_repeat	1	49	(0)	3381145
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
192	0.0	0.6	0.0	chr6	42262435	42262600	(128543379)	+	(AG)n	Simple_repeat	1	167	(0)	3382890
12	43.1	0.0	0.0	chr6	42452222	42452296	(128353683)	+	G-rich	Low_complexity	1	75	(0)	3383278
20	25.6	2.6	2.5	chr6	42782747	42782824	(128023155)	+	G-rich	Low_complexity	1	80	(0)	3384025
1121	5.7	0.6	1.9	chr6	42959437	42959498	(127846481)	C	MER51-int	LTR/ERV1	(7656)	160	98	3384433
40	0.0	2.4	2.3	chr6	42959499	42959540	(127846439)	+	(GA)n	Simple_repeat	1	43	(0)	3384438
1121	5.7	0.6	1.9	chr6	42959541	42959639	(127846340)	C	MER51-int	LTR/ERV1	(7719)	97	1	3384433
2210	9.8	10.6	2.6	chr6	42959640	42959984	(127845995)	C	MER51B	LTR/ERV1	(0)	377	2	3384433
2356	9.3	0.3	0.0	chr6	43118255	43118555	(127687424)	+	AluSx1	SINE/Alu	1	302	(10)	3384733
854	20.4	2.1	0.0	chr6	43118556	43118601	(127687378)	+	MER3	DNA/hAT-Charlie	162	208	(1)	3384732
259	16.4	1.8	3.5	chr6	43118560	43118616	(127687363)	C	MER3	DNA/hAT-Charlie	(119)	90	35	3384734
47	0.0	0.0	0.0	chr6	43118621	43118660	(127687319)	+	(CT)n	Simple_repeat	1	40	(0)	3384735
53	12.2	0.0	0.0	chr6	43118661	43118739	(127687240)	+	(AT)n	Simple_repeat	1	79	(0)	3384736
266	27.3	6.8	9.2	chr6	43130000	43130160	(127675819)	+	MIR3	SINE/MIR	9	170	(60)	3384756
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
4192	20.4	7.6	8.2	chr6	43237835	43238535	(127567444)	+	L1MEc	LINE/L1	40	721	(5679)	3384984
1797	18.6	0.0	2.9	chr6	43238536	43238846	(127567133)	C	AluJo	SINE/Alu	(10)	302	1	3384985
12	8.1	3.6	3.5	chr6	43435038	43435065	(127370914)	+	(TTCCT)n	Simple_repeat	1	29	(0)	3385356
2225	11.9	1.0	0.0	chr6	43435251	43435543	(127370436)	+	AluSx	SINE/Alu	1	296	(16)	3385357
16	16.4	0.0	0.0	chr6	43510148	43510181	(127295798)	+	(CGCGGC)n	Simple_repeat	1	34	(0)	3385489
14	27.2	2.0	0.0	chr6	43510376	43510424	(127295555)	+	(CGGCCC)n	Simple_repeat	1	50	(0)	3385490
22	14.9	0.0	0.0	chr6	43769692	43769738	(127036241)	+	(GT)n	Simple_repeat	1	47	(0)	3385987
13	23.2	2.4	0.0	chr6	43771190	43771230	(127034749)	+	(AGCCGG)n	Simple_repeat	1	42	(0)	3385991
19	28.1	0.0	5.6	chr6	43771865	43771954	(127034025)	+	(CCGCC)n	Simple_repeat	1	90	(0)	3385992
23	21.3	0.0	0.0	chr6	43782131	43782184	(127023795)	+	GA-rich	Low_complexity	1	54	(0)	3385999
50	4.0	0.0	0.0	chr6	44007130	44007181	(126798798)	+	(CT)n	Simple_repeat	1	52	(0)	3386400
747	27.9	11.0	1.4	chr6	44007252	44007545	(126798434)	C	L2a	LINE/L2	(35)	3391	3066	3386401
266	34.9	2.9	0.0	chr6	44068723	44068854	(126737125)	C	X7A_LINE	LINE/CR1	(36)	231	96	3386506
2404	10.8	3.6	7.2	chr6	44069050	44069478	(126736501)	C	L1MB3	LINE/L1	(9)	6174	5762	3386507
273	25.2	8.6	5.2	chr6	44238317	44238450	(126567529)	C	MIRb	SINE/MIR	(23)	245	107	3386834
194	36.1	7.7	0.9	chr6	44238385	44238493	(126567486)	+	MIRc	SINE/MIR	137	253	(15)	3386835
17	10.5	6.5	0.0	chr6	44238501	44238531	(126567448)	+	(TC)n	Simple_repeat	1	33	(0)	3386836
20	18.4	0.0	0.0	chr6	44388135	44388171	(126417808)	+	(C)n	Simple_repeat	1	37	(0)	3387105
972	28.6	8.8	5.7	chr6	44442411	44443021	(126362958)	C	L1M3de	LINE/L1	(4103)	3462	2849	3387195
29	22.8	2.4	6.9	chr6	44443024	44443150	(126362829)	+	(TCTT)n	Simple_repeat	1	130	(0)	3387197
7858	21.4	4.7	1.4	chr6	44443154	44445278	(126360701)	C	L1M3de	LINE/L1	(4516)	2970	854	3387195
87	22.9	4.0	0.4	chr6	45817210	45817437	(124988542)	+	GA-rich	Low_complexity	1	237	(0)	3389212
49	4.0	0.0	0.0	chr6	45922808	45922858	(124883121)	+	(AG)n	Simple_repeat	1	51	(0)	3389388
63	1.8	0.0	0.0	chr6	45974523	45974580	(124831399)	+	(AG)n	Simple_repeat	1	58	(0)	3389490
14882	18.9	6.5	2.9	chr6	46444480	46451068	(124354911)	+	L1MA8	LINE/L1	1135	7709	(1)	3390207
102	26.8	1.2	3.7	chr6	46959512	46959567	(123846412)	+	G-rich	Low_complexity	1	55	(0)	3390997
36	2.7	0.0	0.0	chr6	46959568	46959605	(123846374)	+	(AAGG)n	Simple_repeat	1	38	(0)	3390998
102	26.8	1.2	3.7	chr6	46959606	46959781	(123846198)	+	G-rich	Low_complexity	56	229	(0)	3390999
2164	13.1	12.4	0.8	chr6	47013663	47013858	(123792121)	+	MSTA	LTR/ERVL-MaLR	1	208	(220)	3391079
39	2.3	2.2	2.1	chr6	47013859	47013904	(123792075)	+	(TC)n	Simple_repeat	1	47	(0)	3391080
2164	13.1	12.4	0.8	chr6	47013905	47014085	(123791894)	+	MSTA	LTR/ERVL-MaLR	209	427	(1)	3391079
113	4.8	1.5	0.0	chr6	47031258	47031387	(123774592)	+	(TC)n	Simple_repeat	1	132	(0)	3391114
236	42.7	1.4	1.4	chr6	47035027	47035171	(123770808)	C	MamRTE1	LINE/RTE-BovB	(382)	3430	3286	3391122
1805	20.6	4.2	7.0	chr6	47337186	47337655	(123468324)	+	MLT1D	LTR/ERVL-MaLR	1	456	(49)	3391589
44	2.4	0.0	0.0	chr6	47337658	47337699	(123468280)	+	(GA)n	Simple_repeat	1	42	(0)	3391590
15	17.5	0.0	0.0	chr6	47337780	47337811	(123468168)	+	(ATC)n	Simple_repeat	1	32	(0)	3391591
18	19.9	0.0	0.0	chr6	47484352	47484386	(123321593)	+	(T)n	Simple_repeat	1	35	(0)	3391832
45868	7.1	2.0	1.1	chr6	47641260	47647687	(123158292)	+	Harlequin-int	LTR/ERV1	413	6896	(0)	3392053
54	0.0	0.0	0.0	chr6	47731739	47731784	(123074195)	+	(GA)n	Simple_repeat	1	46	(0)	3392199
17	8.3	3.9	0.0	chr6	49541596	49541621	(121264358)	+	(GA)n	Simple_repeat	1	27	(0)	3394522
1937	18.4	0.0	0.3	chr6	52333006	52333314	(118472665)	+	AluJo	SINE/Alu	1	308	(4)	3398369
127	16.9	1.2	1.6	chr6	52333315	52333564	(118472415)	+	A-rich	Low_complexity	1	253	(0)	3398370
17	13.2	6.0	7.0	chr6	52362168	52362234	(118443745)	+	(GCTCGG)n	Simple_repeat	1	71	(0)	3398425
3093	25.9	6.5	5.1	chr6	52480401	52481504	(118324475)	C	L2a	LINE/L2	(19)	3407	2300	3398590
42	0.0	0.0	0.0	chr6	52481505	52481540	(118324439)	+	(TC)n	Simple_repeat	1	36	(0)	3398592
1493	15.6	6.8	3.3	chr6	52481541	52481810	(118324169)	C	AluJo	SINE/Alu	(32)	280	1	3398593
44	10.2	0.0	0.0	chr6	52982861	52982923	(117823056)	+	(GA)n	Simple_repeat	1	63	(0)	3399357
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
75	26.4	4.0	0.0	chr6	53369095	53369313	(117436666)	+	(TCTC)n	Simple_repeat	1	228	(0)	3400067
2002	15.2	0.7	0.7	chr6	53369314	53369622	(117436357)	C	AluSz	SINE/Alu	(3)	309	1	3400068
4187	16.8	6.3	4.8	chr6	53392226	53393030	(117412949)	C	MER21A	LTR/ERVL	(6)	925	131	3400098
45	2.4	0.0	0.0	chr6	53393031	53393073	(117412906)	+	(AG)n	Simple_repeat	1	43	(0)	3400099
4187	16.8	6.3	4.8	chr6	53393074	53393154	(117412825)	C	MER21A	LTR/ERVL	(801)	130	26	3400098
43	2.5	0.0	0.0	chr6	53393155	53393195	(117412784)	+	(CT)n	Simple_repeat	1	41	(0)	3400100
3696	15.1	3.4	4.8	chr6	53393209	53393958	(117412021)	+	L1MA10	LINE/L1	5586	6324	(10)	3400097
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
20	25.2	0.0	7.6	chr6	53795054	53795075	(117010904)	+	(GCG)n	Simple_repeat	53	103	(0)	3400740
231	21.2	2.9	2.1	chr6	54310381	54310973	(116495006)	+	(CTTT)n	Simple_repeat	1	597	(0)	3401467
1399	23.5	3.4	3.9	chr6	55000067	55000275	(115805704)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	173	3402385
34	0.0	0.0	0.0	chr6	55000276	55000304	(115805675)	+	(AG)n	Simple_repeat	1	29	(0)	3402386
1399	21.1	2.4	3.4	chr6	55000305	55000455	(115805524)	C	MLT1A	LTR/ERVL-MaLR	(202)	172	12	3402385
58	18.2	0.0	0.0	chr6	55743962	55744067	(115061912)	+	(TC)n	Simple_repeat	1	106	(0)	3403285
239	29.2	1.4	0.0	chr6	55744152	55744223	(115061756)	C	MLT1J	LTR/ERVL-MaLR	(323)	189	117	3403286
50	8.4	2.6	0.0	chr6	55811639	55811715	(114994264)	+	(CT)n	Simple_repeat	1	79	(0)	3403364
366	33.7	5.4	12.2	chr6	55811718	55812038	(114993941)	+	L2c	LINE/L2	3070	3367	(20)	3403365
1541	22.5	2.8	6.4	chr6	55841628	55841902	(114964077)	C	MLT1B	LTR/ERVL-MaLR	(136)	254	2	3403404
43	2.5	0.0	0.0	chr6	55841903	55841943	(114964036)	+	(AG)n	Simple_repeat	1	41	(0)	3403406
251	27.9	5.5	0.0	chr6	55841952	55842037	(114963942)	C	L1ME2	LINE/L1	(1460)	1119	1029	3403401
37	19.5	0.0	0.0	chr6	55853304	55853374	(114952605)	+	(CT)n	Simple_repeat	1	71	(0)	3403426
18	30.0	0.0	0.0	chr6	55962533	55962613	(114843366)	+	(TTTTT)n	Simple_repeat	1	81	(0)	3403579
54	6.6	0.0	0.0	chr6	55962614	55962677	(114843302)	+	(TC)n	Simple_repeat	1	64	(0)	3403580
17	31.2	2.6	5.1	chr6	55962678	55962710	(114843269)	+	(TCCT)n	Simple_repeat	2	32	(0)	3403581
38	2.8	0.0	0.0	chr6	56148333	56148369	(114657610)	+	(AG)n	Simple_repeat	1	37	(0)	3403814
334	28.6	10.0	1.1	chr6	56148459	56148649	(114657330)	C	Plat_L3	LINE/CR1	(314)	3272	3063	3403815
242	18.0	9.3	1.0	chr6	56641045	56641108	(114164871)	C	L1ME4b	LINE/L1	(496)	396	342	3404378
40	0.0	0.0	0.0	chr6	56641116	56641149	(114164830)	+	(AG)n	Simple_repeat	1	34	(0)	3404379
2148	13.5	0.0	0.3	chr6	56641305	56641600	(114164379)	+	AluSx1	SINE/Alu	1	295	(17)	3404380
1881	14.6	0.4	0.4	chr6	56916472	56916725	(113889254)	+	AluJb	SINE/Alu	3	256	(56)	3404829
34	2.4	2.4	0.0	chr6	56916737	56916778	(113889201)	+	(TC)n	Simple_repeat	1	43	(0)	3404830
54	0.0	0.0	0.0	chr6	56916779	56916824	(113889155)	+	(CA)n	Simple_repeat	1	46	(0)	3404831
3482	20.9	4.9	0.9	chr6	56937043	56938053	(113867926)	+	L1ME1	LINE/L1	5406	6453	(124)	3404869
41	2.6	0.0	0.0	chr6	56938070	56938109	(113867870)	+	(CT)n	Simple_repeat	1	40	(0)	3404870
20	0.0	0.0	0.0	chr6	56938110	56938131	(113867848)	+	(AT)n	Simple_repeat	1	22	(0)	3404871
27	22.4	0.0	0.0	chr6	57299035	57299091	(113506888)	+	(TC)n	Simple_repeat	1	57	(0)	3405418
16	5.2	0.0	0.0	chr6	57299091	57299110	(113506869)	+	(TG)n	Simple_repeat	1	20	(0)	3405419
462	35.2	1.0	5.7	chr6	57904411	57904621	(112901358)	+	MIR	SINE/MIR	2	202	(60)	3406257
15	22.5	0.0	0.0	chr6	57904659	57904695	(112901284)	+	GA-rich	Low_complexity	1	37	(0)	3406258
307	33.6	4.3	0.0	chr6	58114064	58114173	(112691806)	+	MER117	DNA/hAT-Charlie	67	181	(16)	3406597
538	29.2	2.3	3.5	chr6	63403757	63403930	(107402049)	+	MLT1F2	LTR/ERVL-MaLR	1	172	(388)	3410437
40	4.9	0.0	0.0	chr6	63403938	63403980	(107401999)	+	(CT)n	Simple_repeat	1	43	(0)	3410438
1197	17.7	4.9	2.5	chr6	63404013	63404250	(107401729)	+	MLT1E1A	LTR/ERVL-MaLR	432	675	(5)	3410439
262	30.2	1.1	1.1	chr6	63634771	63634857	(107171122)	+	MIR	SINE/MIR	170	256	(6)	3410910
220	31.7	8.9	1.6	chr6	63634879	63635003	(107170976)	C	L2c	LINE/L2	(61)	3326	3192	3410911
1536	20.2	8.4	1.1	chr6	67590934	67591299	(103214680)	C	MLT2D	LTR/ERVL	(0)	414	20	3415687
4848	27.6	7.4	3.5	chr6	67591321	67591354	(103214625)	C	L1M4b	LINE/L1	(5053)	1814	1769	3415686
46	7.6	0.0	0.0	chr6	67591355	67591411	(103214568)	+	(TC)n	Simple_repeat	1	57	(0)	3415688
4848	27.6	7.4	3.5	chr6	67591412	67591546	(103214433)	C	L1M4b	LINE/L1	(5099)	1768	1657	3415686
66	4.7	4.5	0.0	chr6	69060187	69060274	(101745705)	+	(TC)n	Simple_repeat	1	92	(0)	3417465
73	2.9	0.0	0.0	chr6	69297341	69297411	(101508568)	+	(TC)n	Simple_repeat	1	71	(0)	3417762
379	33.3	8.1	9.4	chr6	70793333	70793638	(100012341)	C	L2c	LINE/L2	(774)	2645	2351	3419751
34	0.0	0.0	0.0	chr6	70793645	70793673	(100012306)	+	(AG)n	Simple_repeat	1	29	(0)	3419754
2305	8.7	0.6	4.0	chr6	70793710	70794032	(100011947)	C	AluSp	SINE/Alu	(1)	312	1	3419755
13	17.5	0.0	2.9	chr6	71420193	71420226	(99385753)	+	(CGCGC)n	Simple_repeat	1	34	(0)	3420542
2608	4.9	2.0	0.0	chr6	72338370	72338716	(98467263)	+	L1PA4	LINE/L1	5042	5395	(751)	3421712
550	24.8	6.0	0.0	chr6	72338717	72338841	(98467138)	C	MIR	SINE/MIR	(115)	147	15	3421713
46	0.0	0.0	0.0	chr6	72338850	72338888	(98467091)	+	(AG)n	Simple_repeat	1	39	(0)	3421714
329	33.8	10.1	9.6	chr6	72338931	72339254	(98466725)	C	L2c	LINE/L2	(3)	3372	3047	3421715
258	26.2	23.4	5.2	chr6	72444375	72444510	(98361469)	+	MLT1O	LTR/ERVL-MaLR	149	330	(212)	3421872
36	2.9	0.0	0.0	chr6	72444511	72444545	(98361434)	+	(AG)n	Simple_repeat	1	35	(0)	3421873
258	26.2	23.4	5.2	chr6	72444546	72444581	(98361398)	+	MLT1O	LTR/ERVL-MaLR	331	362	(180)	3421872
15	27.1	5.2	3.9	chr6	73248294	73248354	(97557625)	+	(TCCTCTC)n	Simple_repeat	1	62	(0)	3422962
48	4.8	4.6	0.0	chr6	73248355	73248419	(97557560)	+	(TC)n	Simple_repeat	1	68	(0)	3422963
15	27.1	5.2	3.9	chr6	73248420	73248454	(97557525)	+	(TCCTCTC)n	Simple_repeat	7	42	(0)	3422964
2208	11.2	0.9	0.3	chr6	73449714	73450024	(97355955)	+	AluSq	SINE/Alu	1	313	(0)	3423466
46	13.7	5.6	0.0	chr6	73450040	73450129	(97355850)	+	GA-rich	Low_complexity	1	95	(0)	3423467
2443	8.1	0.7	0.0	chr6	73450136	73450445	(97355534)	+	AluSp	SINE/Alu	2	313	(0)	3423468
40	0.0	0.0	0.0	chr6	75208125	75208168	(95597811)	+	(TC)n	Simple_repeat	1	44	(0)	3425883
70	0.0	0.0	0.0	chr6	75208169	75208228	(95597751)	+	(TG)n	Simple_repeat	1	60	(0)	3425884
373	25.8	20.5	3.0	chr6	75457453	75457612	(95348367)	C	MamTip1	DNA/hAT-Tip100	(0)	267	64	3426235
42	0.0	0.0	0.0	chr6	75457613	75457648	(95348331)	+	(TC)n	Simple_repeat	1	36	(0)	3426236
373	25.8	20.5	3.0	chr6	75457649	75457687	(95348292)	C	MamTip1	DNA/hAT-Tip100	(204)	63	25	3426235
16	0.0	0.0	0.0	chr6	75496223	75496240	(95309739)	+	(CT)n	Simple_repeat	1	18	(0)	3426284
18	4.5	0.0	0.0	chr6	75496242	75496264	(95309715)	+	(AC)n	Simple_repeat	1	23	(0)	3426285
1950	14.7	0.3	4.6	chr6	75577207	75577532	(95228447)	+	AluSz	SINE/Alu	1	312	(0)	3426418
2006	11.6	0.7	0.0	chr6	75577582	75577856	(95228123)	+	AluSx1	SINE/Alu	17	293	(19)	3426419
1719	22.9	7.0	5.4	chr6	75787115	75787676	(95018303)	+	L1ME1	LINE/L1	5435	6075	(104)	3426831
65	0.0	0.0	0.0	chr6	75787677	75787731	(95018248)	+	(TC)n	Simple_repeat	1	55	(0)	3426832
44	7.2	1.7	0.0	chr6	77608455	77608513	(93197466)	+	(TC)n	Simple_repeat	1	60	(0)	3429022
35	0.0	0.0	0.0	chr6	78390732	78390761	(92415218)	+	(GT)n	Simple_repeat	1	30	(0)	3429911
62	0.0	0.0	0.0	chr6	78390767	78390819	(92415160)	+	(AG)n	Simple_repeat	1	53	(0)	3429912
17	18.2	0.0	4.3	chr6	79077039	79077085	(91728894)	+	(CGAG)n	Simple_repeat	1	47	(0)	3430766
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
5827	16.8	3.5	3.8	chr6	79175922	79176974	(91629005)	+	L1MB2	LINE/L1	4707	5778	(393)	3430891
1369	18.9	9.7	0.3	chr6	79176975	79177066	(91628913)	+	MER44A	DNA/TcMar-Tigger	1	99	(240)	3430894
44	0.0	0.0	0.0	chr6	79177067	79177104	(91628875)	+	(GA)n	Simple_repeat	1	38	(0)	3430895
1369	18.9	9.7	0.3	chr6	79177105	79177318	(91628661)	+	MER44A	DNA/TcMar-Tigger	100	338	(1)	3430894
2057	17.2	0.8	0.9	chr6	79341362	79341720	(91464259)	+	MLT2D	LTR/ERVL	1	495	(61)	3431102
57	0.0	0.0	0.0	chr6	79341721	79341769	(91464210)	+	(TC)n	Simple_repeat	1	49	(0)	3431103
328	33.9	0.8	0.0	chr6	79374129	79374249	(91431730)	+	UCON55	DNA/TcMar-Tigger	5	126	(66)	3431130
3208	17.3	0.9	0.6	chr6	79384562	79385107	(91420872)	C	MER68	LTR/ERVL	(3)	560	13	3431148
2390	16.6	5.0	9.1	chr6	79425919	79426456	(91379523)	C	MLT2B2	LTR/ERVL	(0)	515	1	3431211
49	5.8	0.0	0.0	chr6	79783651	79783705	(91022274)	+	(CT)n	Simple_repeat	1	55	(0)	3431759
14	10.4	2.9	5.6	chr6	79947341	79947375	(90858604)	+	(CGG)n	Simple_repeat	1	36	(0)	3431997
13	18.8	4.5	2.2	chr6	79947434	79947477	(90858502)	+	(GCGGCAG)n	Simple_repeat	1	46	(0)	3431998
320	36.0	9.9	2.6	chr6	82072157	82072538	(88733441)	+	AmnSINE1	SINE/5S-Deu-L2	130	542	(33)	3434600
2090	11.9	3.7	0.7	chr6	82212000	82212285	(88593694)	C	AluSx1	SINE/Alu	(17)	295	1	3434790
2388	18.7	8.5	0.0	chr6	82255608	82256069	(88549910)	+	MLT2B4	LTR/ERVL	1	504	(52)	3434891
31	9.6	0.0	0.0	chr6	82256070	82256114	(88549865)	+	(CT)n	Simple_repeat	1	45	(0)	3434892
2388	18.7	8.5	0.0	chr6	82256115	82256154	(88549825)	+	MLT2B4	LTR/ERVL	505	549	(7)	3434891
2142	23.9	2.5	1.3	chr6	82256165	82256792	(88549187)	+	L1M5	LINE/L1	2636	3271	(2875)	3434886
268	32.6	15.0	1.1	chr6	82877094	82877270	(87928709)	C	L1MEd	LINE/L1	(6264)	822	617	3435733
279	33.3	0.0	0.0	chr6	82877278	82877355	(87928624)	+	MERX	DNA/TcMar-Tigger	310	387	(369)	3435734
206	38.4	1.1	0.0	chr6	82992941	82993026	(87812953)	+	L2a	LINE/L2	3295	3381	(45)	3435902
38	2.8	0.0	0.0	chr6	82993122	82993158	(87812821)	+	(GA)n	Simple_repeat	1	37	(0)	3435903
666	25.9	0.6	0.6	chr6	83436992	83437158	(87368821)	C	MLT1G	LTR/ERVL-MaLR	(6)	542	376	3436526
29	13.7	3.5	1.7	chr6	83437188	83437245	(87368734)	+	(CT)n	Simple_repeat	1	60	(0)	3436527
723	24.3	2.1	1.4	chr6	83437292	83437562	(87368417)	C	MLT1G	LTR/ERVL-MaLR	(318)	273	8	3436526
66	4.5	0.0	0.0	chr6	83556327	83556396	(87249583)	+	(GA)n	Simple_repeat	1	70	(0)	3436690
329	27.2	10.7	3.0	chr6	83769081	83769308	(87036671)	+	MLT1M	LTR/ERVL-MaLR	83	405	(267)	3436946
41	2.5	0.0	0.0	chr6	83769375	83769414	(87036565)	+	(GA)n	Simple_repeat	1	40	(0)	3436947
1769	16.8	3.1	0.0	chr6	83769484	83769768	(87036211)	C	AluJb	SINE/Alu	(18)	294	1	3436948
15	0.0	0.0	0.0	chr6	83854257	83854273	(86951706)	+	(TC)n	Simple_repeat	1	17	(0)	3437067
37	0.0	0.0	0.0	chr6	83978728	83978759	(86827220)	+	(GA)n	Simple_repeat	1	32	(0)	3437234
16	7.8	0.0	3.5	chr6	84033787	84033815	(86772164)	+	(GGC)n	Simple_repeat	1	29	(0)	3437334
1703	27.9	6.7	1.5	chr6	84232673	84233090	(86572889)	+	LTR16E2	LTR/ERVL	4	448	(120)	3437588
50	0.0	0.0	0.0	chr6	84233091	84233133	(86572846)	+	(CT)n	Simple_repeat	1	43	(0)	3437589
1703	27.9	6.7	1.5	chr6	84233134	84233249	(86572730)	+	LTR16E2	LTR/ERVL	449	567	(1)	3437588
54	12.7	0.0	0.0	chr6	84360165	84360260	(86445719)	+	(AC)n	Simple_repeat	1	96	(0)	3437761
32	9.5	0.0	0.0	chr6	84360262	84360306	(86445673)	+	(GA)n	Simple_repeat	1	45	(0)	3437762
30	0.0	0.0	0.0	chr6	84500344	84500369	(86305610)	+	(TC)n	Simple_repeat	1	26	(0)	3437914
366	32.3	13.0	1.5	chr6	84500373	84500576	(86305403)	+	MIRb	SINE/MIR	12	242	(26)	3437915
1512	20.2	6.9	1.5	chr6	84657031	84657211	(86148768)	+	MLT1A	LTR/ERVL-MaLR	1	189	(185)	3438104
59	5.6	2.7	0.0	chr6	84657212	84657286	(86148693)	+	(TC)n	Simple_repeat	1	77	(0)	3438105
1512	20.2	6.9	1.5	chr6	84657287	84657445	(86148534)	+	MLT1A	LTR/ERVL-MaLR	190	360	(14)	3438104
6595	8.7	5.3	0.7	chr6	84718364	84719411	(86086568)	C	HERVIP10FH-int	LTR/ERV1	(3165)	1937	839	3438187
19	21.1	0.0	0.0	chr6	84746226	84746264	(86059715)	+	GA-rich	Low_complexity	1	39	(0)	3438219
15791	13.9	1.4	3.3	chr6	84987161	84989409	(85816570)	+	L1PA11	LINE/L1	420	2626	(3705)	3438492
43	2.5	0.0	0.0	chr6	84989410	84989450	(85816529)	+	(TC)n	Simple_repeat	1	41	(0)	3438493
15791	9.9	1.0	2.6	chr6	84989451	84990293	(85815686)	+	L1PA11	LINE/L1	2627	3446	(2885)	3438492
2099	14.6	8.8	0.6	chr6	85032449	85032611	(85773368)	C	THE1C	LTR/ERVL-MaLR	(0)	375	197	3438557
43	4.5	0.0	0.0	chr6	85032612	85032657	(85773322)	+	(GA)n	Simple_repeat	1	46	(0)	3438558
2099	14.6	8.8	0.6	chr6	85032658	85032837	(85773142)	C	THE1C	LTR/ERVL-MaLR	(179)	196	2	3438557
11003	12.8	5.5	0.3	chr6	85032838	85034383	(85771596)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	1	3438557
1446	9.2	14.2	7.8	chr6	85605155	85605435	(85200544)	C	AluSx	SINE/Alu	(10)	302	1	3439299
868	15.0	1.2	8.1	chr6	85605436	85605465	(85200514)	+	FRAM	SINE/Alu	140	162	(14)	3439298
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
20	24.0	2.4	4.6	chr6	85643596	85643680	(85162299)	+	(CCCCG)n	Simple_repeat	1	87	(0)	3439346
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
788	27.2	2.4	1.5	chr6	85670575	85670779	(85135200)	+	Charlie13a	DNA/hAT-Charlie	898	1104	(410)	3439417
27	27.1	0.0	2.5	chr6	85670780	85670867	(85135112)	+	(CTCC)n	Simple_repeat	1	85	(0)	3439418
1655	9.0	0.0	0.5	chr6	85670907	85671118	(85134861)	C	AluSz	SINE/Alu	(100)	212	2	3439419
48	0.0	2.0	2.0	chr6	86914537	86914585	(83891394)	+	(TC)n	Simple_repeat	1	50	(0)	3440770
16	0.0	0.0	0.0	chr6	87265090	87265107	(83540872)	+	(TC)n	Simple_repeat	1	18	(0)	3441298
1324	11.2	0.0	1.1	chr6	87265108	87265285	(83540694)	C	AluSc8	SINE/Alu	(7)	304	129	3441299
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
42	0.0	0.0	0.0	chr6	87768517	87768552	(83037427)	+	(CT)n	Simple_repeat	1	36	(0)	3442174
8782	14.8	4.5	6.9	chr6	88037820	88038960	(82767019)	+	L1MD1	LINE/L1	2566	3715	(2604)	3442615
357	28.0	0.0	0.0	chr6	88038961	88039035	(82766944)	+	MER2B	DNA/TcMar-Tigger	1	75	(261)	3442616
8782	14.8	4.5	6.9	chr6	88039036	88039071	(82766908)	+	L1MD1	LINE/L1	3716	3753	(2566)	3442615
47	2.3	0.0	0.0	chr6	88039072	88039116	(82766863)	+	(AG)n	Simple_repeat	1	45	(0)	3442617
8782	14.8	4.5	6.9	chr6	88039117	88039846	(82766133)	+	L1MD1	LINE/L1	3754	4497	(1822)	3442615
17	19.1	7.2	2.7	chr6	88166294	88166362	(82639617)	+	(TCGCTC)n	Simple_repeat	1	74	(0)	3442790
1265	21.5	8.4	10.0	chr6	88992709	88992806	(81813173)	+	MER2	DNA/TcMar-Tigger	254	345	(0)	3443920
17	5.0	0.0	0.0	chr6	88992931	88992951	(81813028)	+	(GA)n	Simple_repeat	1	21	(0)	3443922
13	23.5	0.0	0.0	chr6	89412325	89412359	(81393620)	+	(CGCG)n	Simple_repeat	1	35	(0)	3444715
13	23.9	3.1	4.5	chr6	89433119	89433182	(81372797)	+	G-rich	Low_complexity	1	66	(0)	3444762
30	3.4	0.0	0.0	chr6	89483894	89483923	(81322056)	+	(CT)n	Simple_repeat	1	30	(0)	3444867
2161	10.8	3.5	0.7	chr6	89483930	89484207	(81321772)	C	AluSx1	SINE/Alu	(26)	286	1	3444868
1378	15.2	1.7	3.7	chr6	89734447	89734689	(81071290)	+	AluSx3	SINE/Alu	74	311	(0)	3445252
29	0.0	0.0	0.0	chr6	89734692	89734716	(81071263)	+	(AG)n	Simple_repeat	1	25	(0)	3445253
276	23.5	1.6	1.8	chr6	89734717	89734817	(81071162)	+	L1ME4b	LINE/L1	266	339	(553)	3445254
327	30.6	3.2	2.4	chr6	90137905	90138028	(80667951)	+	MIR3	SINE/MIR	73	197	(11)	3445944
43	0.0	0.0	0.0	chr6	90138054	90138090	(80667889)	+	(AC)n	Simple_repeat	1	37	(0)	3445945
17	5.0	0.0	0.0	chr6	90138091	90138111	(80667868)	+	(TC)n	Simple_repeat	1	21	(0)	3445946
2347	11.5	1.6	0.0	chr6	90138221	90138524	(80667455)	+	AluSx	SINE/Alu	1	309	(3)	3445947
675	28.0	5.5	2.6	chr6	90186699	90186929	(80619050)	C	MIRb	SINE/MIR	(11)	257	20	3446011
461	29.2	4.7	2.2	chr6	90187745	90187947	(80618032)	C	MIR	SINE/MIR	(10)	252	50	3446012
43	0.0	0.0	0.0	chr6	90218921	90218957	(80587022)	+	(GT)n	Simple_repeat	1	37	(0)	3446050
12	22.1	2.5	2.4	chr6	90219447	90219486	(80586493)	+	(TCTCC)n	Simple_repeat	1	41	(0)	3446052
44	2.4	0.0	0.0	chr6	90231973	90232014	(80573965)	+	(GA)n	Simple_repeat	1	42	(0)	3446075
2241	13.1	0.0	0.0	chr6	90342248	90342559	(80463420)	+	AluSx	SINE/Alu	1	312	(0)	3446248
48	4.1	0.0	0.0	chr6	90342640	90342689	(80463290)	+	(GA)n	Simple_repeat	1	50	(0)	3446249
2018	19.2	1.6	3.6	chr6	90366215	90366703	(80439276)	C	L1MA9	LINE/L1	(38)	6274	5794	3446283
40	2.6	0.0	0.0	chr6	90366704	90366742	(80439237)	+	(TC)n	Simple_repeat	1	39	(0)	3446284
36	0.0	0.0	0.0	chr6	90414152	90414182	(80391797)	+	(GT)n	Simple_repeat	1	31	(0)	3446362
268	5.8	8.8	1.9	chr6	90414184	90414289	(80391690)	+	HERV17-int	LTR/ERV1	714	827	(7799)	3446363
308	5.1	0.0	0.0	chr6	90788826	90788864	(80017115)	C	MADE1	DNA/TcMar-Mariner	(41)	39	1	3446870
17	0.0	4.8	0.0	chr6	90788871	90788891	(80017088)	+	(TC)n	Simple_repeat	1	22	(0)	3446871
2420	17.6	3.8	6.3	chr6	90788964	90789471	(80016508)	C	MLT2B2	LTR/ERVL	(20)	495	1	3446869
63	0.0	0.0	0.0	chr6	90845483	90845536	(79960443)	+	(GA)n	Simple_repeat	1	54	(0)	3446940
199	41.1	0.9	0.0	chr6	90911879	90911985	(79893994)	+	MIR3	SINE/MIR	28	135	(73)	3447012
1275	21.8	8.6	4.7	chr6	91016959	91017142	(79788837)	C	MSTD	LTR/ERVL-MaLR	(0)	396	192	3447142
60	0.0	0.0	0.0	chr6	91017143	91017193	(79788786)	+	(AG)n	Simple_repeat	1	51	(0)	3447143
1275	21.8	8.6	4.7	chr6	91017194	91017388	(79788591)	C	MSTD	LTR/ERVL-MaLR	(205)	191	1	3447142
18	34.2	1.5	0.0	chr6	91115719	91115783	(79690196)	+	(CA)n	Simple_repeat	1	66	(0)	3447268
40	6.2	0.0	0.0	chr6	91115777	91115827	(79690152)	+	(AG)n	Simple_repeat	1	51	(0)	3447269
1726	18.1	11.2	3.1	chr6	91567574	91567774	(79238205)	+	MSTB	LTR/ERVL-MaLR	5	217	(209)	3447863
55	10.3	0.0	0.0	chr6	91567775	91567857	(79238122)	+	(CT)n	Simple_repeat	1	83	(0)	3447864
1726	16.3	12.5	1.1	chr6	91567858	91568064	(79237915)	+	MSTB	LTR/ERVL-MaLR	218	426	(0)	3447863
4817	25.6	5.0	4.8	chr6	92522356	92524058	(78281921)	C	L1M4b	LINE/L1	(4790)	2077	481	3449027
1465	17.3	10.5	1.7	chr6	92743709	92743879	(78062100)	+	THE1D	LTR/ERVL-MaLR	1	192	(189)	3449257
37	0.0	0.0	0.0	chr6	92743880	92743911	(78062068)	+	(TC)n	Simple_repeat	1	32	(0)	3449258
1465	17.3	10.5	1.7	chr6	92743912	92744086	(78061893)	+	THE1D	LTR/ERVL-MaLR	193	380	(1)	3449257
425	35.3	5.0	0.0	chr6	93090748	93090954	(77715025)	C	L4_A_Mam	LINE/RTE-X	(553)	4437	4220	3449663
21	0.0	0.0	0.0	chr6	93091079	93091101	(77714878)	+	(AG)n	Simple_repeat	1	23	(0)	3449664
28	28.7	3.4	0.0	chr6	93295038	93295125	(77510854)	+	GA-rich	Low_complexity	1	91	(0)	3449909
1104	30.0	7.1	0.9	chr6	93351015	93351435	(77454544)	+	LTR16A	LTR/ERVL	1	449	(2)	3449973
60	6.9	3.3	0.0	chr6	93359846	93359936	(77446043)	+	(ATAG)n	Simple_repeat	1	94	(0)	3449987
12	13.7	6.2	0.0	chr6	93416522	93416553	(77389426)	+	A-rich	Low_complexity	1	34	(0)	3450051
571	26.0	10.5	3.5	chr6	93445927	93446129	(77359850)	+	MIR	SINE/MIR	35	253	(9)	3450092
36	2.9	0.0	0.0	chr6	93446174	93446208	(77359771)	+	(AG)n	Simple_repeat	1	35	(0)	3450093
1704	15.6	6.6	4.2	chr6	93446249	93446603	(77359376)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3450094
96	4.2	0.0	0.0	chr6	93664696	93664795	(77141184)	+	(GA)n	Simple_repeat	1	100	(0)	3450363
1880	15.5	14.2	1.3	chr6	93664796	93664989	(77140990)	C	MSTA	LTR/ERVL-MaLR	(232)	196	2	3450362
61	3.4	0.0	0.0	chr6	96708073	96708133	(74097846)	+	(AG)n	Simple_repeat	1	61	(0)	3454027
2096	10.4	0.0	0.4	chr6	96708151	96708419	(74097560)	C	AluSx	SINE/Alu	(44)	268	1	3454028
355	25.9	6.8	3.1	chr6	97301728	97301945	(73504034)	C	MLT1H1	LTR/ERVL-MaLR	(6)	542	310	3454795
41	2.6	0.0	0.0	chr6	97301998	97302037	(73503942)	+	(TC)n	Simple_repeat	1	40	(0)	3454796
569	22.7	10.8	3.9	chr6	97302075	97302337	(73503642)	C	MLT1H1	LTR/ERVL-MaLR	(306)	285	13	3454795
49	2.2	0.0	0.0	chr6	98337808	98337853	(72468126)	+	(GA)n	Simple_repeat	1	46	(0)	3456128
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
17	14.1	5.1	0.0	chr6	98834764	98834802	(71971177)	+	GA-rich	Low_complexity	1	41	(0)	3456775
56	8.4	0.0	0.0	chr6	98835245	98835321	(71970658)	+	(GCAGCA)n	Simple_repeat	1	77	(0)	3456777
14	12.7	0.0	0.0	chr6	98835584	98835609	(71970370)	+	(GCC)n	Simple_repeat	1	26	(0)	3456778
24	20.3	2.0	0.0	chr6	98836468	98836518	(71969461)	+	GA-rich	Low_complexity	1	52	(0)	3456779
13	23.7	6.6	1.5	chr6	98845227	98845287	(71960692)	+	(CCGC)n	Simple_repeat	1	65	(0)	3456781
1776	15.8	7.6	11.7	chr6	99852426	99852877	(70953102)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3458231
24	18.1	0.0	3.7	chr6	99874039	99874092	(70931887)	+	GA-rich	Low_complexity	1	54	(0)	3458266
262	20.2	2.5	9.2	chr6	99874093	99874179	(70931800)	+	LTR81B	LTR/Gypsy	224	304	(1089)	3458267
32	24.8	2.3	0.0	chr6	100290073	100290158	(70515821)	+	GA-rich	Low_complexity	1	88	(0)	3458831
357	30.8	6.4	1.7	chr6	100290159	100290378	(70515601)	C	L1M2	LINE/L1	(917)	5229	5001	3458832
83	1.4	0.0	0.0	chr6	100457997	100458071	(70347908)	+	(TC)n	Simple_repeat	1	75	(0)	3459030
669	22.8	0.0	3.7	chr6	101955372	101955507	(68850472)	+	FLAM_C	SINE/Alu	3	133	(10)	3460987
8459	23.0	5.0	2.3	chr6	101955508	101955576	(68850403)	C	L1MB8	LINE/L1	(2663)	4343	4313	3460985
47	0.0	0.0	0.0	chr6	101955577	101955616	(68850363)	+	(TC)n	Simple_repeat	1	40	(0)	3460988
8459	23.0	5.0	2.3	chr6	101955617	101956203	(68849776)	C	L1MB8	LINE/L1	(2694)	4312	3677	3460985
34	9.3	0.0	0.0	chr6	104527166	104527212	(66278767)	+	(CT)n	Simple_repeat	1	47	(0)	3464082
18	0.0	0.0	0.0	chr6	104527213	104527229	(66278750)	+	(AC)n	Simple_repeat	2	18	(0)	3464083
28	2.9	0.0	0.0	chr6	105085778	105085807	(65720172)	+	(CT)n	Simple_repeat	1	30	(0)	3464919
57	0.0	0.0	0.0	chr6	105085808	105085856	(65720123)	+	(CA)n	Simple_repeat	1	49	(0)	3464920
18	4.5	0.0	0.0	chr6	105180363	105180385	(65625594)	+	(GA)n	Simple_repeat	1	23	(0)	3465082
1037	16.1	3.0	0.6	chr6	105180398	105180558	(65625421)	C	AluJb	SINE/Alu	(15)	297	133	3465083
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
2007	13.2	0.0	0.0	chr6	105847271	105847542	(64958437)	+	AluSz6	SINE/Alu	1	272	(40)	3465998
76	18.3	3.7	0.0	chr6	105847547	105847709	(64958270)	+	GA-rich	Low_complexity	1	169	(0)	3465999
373	32.8	0.0	10.3	chr6	105891496	105891631	(64914348)	C	L2b	LINE/L2	(10)	3377	3245	3466049
42	0.0	2.0	0.0	chr6	105891632	105891680	(64914299)	+	(GA)n	Simple_repeat	1	50	(0)	3466050
54	0.0	0.0	0.0	chr6	106111882	106111927	(64694052)	+	(GA)n	Simple_repeat	1	46	(0)	3466394
1651	18.7	9.3	10.7	chr6	106163005	106163406	(64642573)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3466481
4023	17.6	8.8	2.2	chr6	106808425	106810099	(63995880)	+	HERV35I-int	LTR/ERV1	1	1922	(4996)	3467553
82	15.5	0.7	0.0	chr6	106884667	106884805	(63921174)	+	(CT)n	Simple_repeat	1	140	(0)	3467684
1304	14.5	0.0	0.0	chr6	106945672	106945871	(63860108)	+	AluSx	SINE/Alu	111	310	(2)	3467797
180	8.2	0.7	1.8	chr6	106945872	106946142	(63859837)	+	(GAAA)n	Simple_repeat	1	273	(0)	3467799
333	23.5	8.7	0.0	chr6	106946171	106946306	(63859673)	+	HAL1	LINE/L1	1166	1314	(1193)	3467795
826	18.8	0.0	0.0	chr6	107016653	107016785	(63789194)	+	FLAM_C	SINE/Alu	1	133	(10)	3467983
43	12.0	2.7	0.0	chr6	107016789	107016863	(63789116)	+	(AAAG)n	Simple_repeat	1	77	(0)	3467984
1480	21.8	9.4	0.0	chr6	107217208	107217533	(63588446)	+	MLT1D	LTR/ERVL-MaLR	26	385	(120)	3468457
26	22.8	0.0	0.0	chr6	107533272	107533333	(63272646)	+	A-rich	Low_complexity	1	62	(0)	3469024
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
46	0.0	0.0	0.0	chr6	108116119	108116157	(62689822)	+	(GT)n	Simple_repeat	1	39	(0)	3469984
39	6.3	0.0	0.0	chr6	108116158	108116207	(62689772)	+	(AG)n	Simple_repeat	1	50	(0)	3469985
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
2010	12.5	2.0	0.0	chr6	108533676	108533962	(62272017)	+	AluSx	SINE/Alu	1	293	(19)	3470797
48	0.0	0.0	0.0	chr6	108533965	108534005	(62271974)	+	(GA)n	Simple_repeat	1	41	(0)	3470798
66	17.1	7.5	5.2	chr6	108534006	108534256	(62271723)	+	GA-rich	Low_complexity	15	272	(0)	3470799
16	5.3	0.0	0.0	chr6	108691171	108691190	(62114789)	+	(GT)n	Simple_repeat	1	20	(0)	3470980
45	2.4	0.0	0.0	chr6	108691191	108691233	(62114746)	+	(GA)n	Simple_repeat	1	43	(0)	3470981
2539	26.0	11.1	4.2	chr6	109097537	109098124	(61707855)	C	L2a	LINE/L2	(3)	3423	2794	3471645
33	7.6	0.0	0.0	chr6	109098125	109098166	(61707813)	+	(TC)n	Simple_repeat	1	42	(0)	3471646
2055	13.3	0.7	0.0	chr6	109098168	109098445	(61707534)	C	AluSq2	SINE/Alu	(33)	280	1	3471647
70	0.0	1.5	1.4	chr6	109142938	109143005	(61662974)	+	(TC)n	Simple_repeat	1	69	(0)	3471729
826	31.5	3.7	2.2	chr6	109143094	109143414	(61662565)	C	LTR88b	LTR/Gypsy?	(466)	371	46	3471730
15	18.9	7.8	2.9	chr6	109382076	109382139	(61423840)	+	(CCGC)n	Simple_repeat	1	69	(0)	3472067
2601	13.0	12.6	5.2	chr6	110123955	110124191	(60681788)	+	MER61D	LTR/ERV1	1	297	(204)	3473186
86	0.0	3.6	0.0	chr6	110124192	110124275	(60681704)	+	(TC)n	Simple_repeat	1	87	(0)	3473187
2601	13.0	12.6	5.2	chr6	110124276	110124499	(60681480)	+	MER61D	LTR/ERV1	298	501	(0)	3473186
231	28.4	0.0	1.3	chr6	110734348	110734422	(60071557)	C	MLT1J1	LTR/ERVL-MaLR	(3)	441	368	3474200
48	0.0	0.0	0.0	chr6	110734521	110734561	(60071418)	+	(CT)n	Simple_repeat	1	41	(0)	3474201
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
1931	15.7	0.0	1.3	chr6	110941782	110942080	(59863899)	C	AluJb	SINE/Alu	(17)	295	1	3474666
71	6.2	0.0	0.0	chr6	110942082	110942166	(59863813)	+	(TCTCTC)n	Simple_repeat	1	85	(0)	3474667
26	0.0	0.0	0.0	chr6	110942167	110942195	(59863784)	+	(AT)n	Simple_repeat	1	29	(0)	3474668
33	27.6	0.0	6.7	chr6	111100832	111100938	(59705041)	+	(ATAT)n	Simple_repeat	1	98	(0)	3475031
49	5.7	0.0	0.0	chr6	111100939	111100993	(59704986)	+	(TC)n	Simple_repeat	1	55	(0)	3475032
2161	11.4	3.9	4.1	chr6	111290973	111291337	(59514642)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3475355
852	29.4	14.5	0.0	chr6	111478894	111479199	(59326780)	+	Tigger19b	DNA/TcMar-Tigger	92	449	(101)	3475660
348	28.1	4.7	0.0	chr6	111550408	111550528	(59255451)	C	Tigger15a	DNA/TcMar-Tigger	(158)	557	431	3475816
20	12.6	2.9	0.0	chr6	111631598	111631632	(59174347)	+	GA-rich	Low_complexity	1	36	(0)	3475966
1038	21.8	9.3	1.3	chr6	111770091	111770388	(59035591)	+	MER33	DNA/hAT-Charlie	1	324	(0)	3476161
16	18.7	4.7	0.0	chr6	111873142	111873184	(58932795)	+	(GGC)n	Simple_repeat	1	45	(0)	3476293
43	2.1	4.2	0.0	chr6	111875822	111875869	(58930110)	+	(CT)n	Simple_repeat	1	50	(0)	3476299
36	19.7	9.2	0.0	chr6	112003742	112003837	(58802142)	+	GA-rich	Low_complexity	1	103	(0)	3476508
29	0.0	0.0	0.0	chr6	112003838	112003862	(58802117)	+	(GA)n	Simple_repeat	1	25	(0)	3476509
36	19.7	9.2	0.0	chr6	112003863	112003884	(58802095)	+	GA-rich	Low_complexity	104	129	(0)	3476510
219	21.6	0.0	5.6	chr6	112176183	112176236	(58629743)	C	MIRc	SINE/MIR	(123)	145	95	3476726
37	21.7	0.0	0.0	chr6	112254337	112254409	(58551570)	+	(CT)n	Simple_repeat	1	73	(0)	3476842
725	31.2	3.9	1.2	chr6	112295917	112296166	(58509813)	+	ERVL-E-int	LTR/ERVL	480	736	(4931)	3476912
304	19.8	0.0	0.0	chr6	112296194	112296259	(58509720)	C	AluJb	SINE/Alu	(10)	310	229	3476913
913	23.7	5.0	1.6	chr6	112296274	112296526	(58509453)	C	L2a	LINE/L2	(607)	2812	2551	3476907
289	31.2	0.0	0.0	chr6	112665594	112665686	(58140293)	C	LTR78B	LTR/ERV1	(879)	417	325	3477405
51	0.0	0.0	0.0	chr6	112665806	112665849	(58140130)	+	(AG)n	Simple_repeat	1	44	(0)	3477406
30	18.5	0.0	0.0	chr6	112665850	112665904	(58140075)	+	(TG)n	Simple_repeat	1	55	(0)	3477407
292	26.4	4.4	3.3	chr6	112665942	112666031	(58139948)	C	LTR78B	LTR/ERV1	(1181)	115	25	3477405
45	20.4	0.9	2.8	chr6	112801815	112801921	(58004058)	+	GA-rich	Low_complexity	1	108	(0)	3477586
16	21.4	6.7	0.0	chr6	112837652	112837696	(57968283)	+	(TC)n	Simple_repeat	1	48	(0)	3477627
54	2.0	0.0	0.0	chr6	112837793	112837843	(57968136)	+	(AG)n	Simple_repeat	1	51	(0)	3477628
55	0.0	0.0	0.0	chr6	112930943	112930989	(57874990)	+	(TC)n	Simple_repeat	1	47	(0)	3477750
23	18.3	3.0	2.9	chr6	112930992	112931057	(57874922)	+	(CTCCCT)n	Simple_repeat	1	68	(0)	3477751
44	30.2	0.0	0.0	chr6	113735841	113735958	(57070021)	+	(AT)n	Simple_repeat	1	118	(0)	3478995
41	0.0	0.0	0.0	chr6	113735959	113735993	(57069986)	+	(AG)n	Simple_repeat	1	35	(0)	3478996
1257	12.4	0.0	0.0	chr6	113736008	113736176	(57069803)	+	AluSq2	SINE/Alu	132	300	(13)	3478997
3893	18.3	1.0	1.1	chr6	113930684	113930703	(56875276)	C	L1M3f	LINE/L1	(4609)	1956	1938	3479364
102	3.9	0.9	0.0	chr6	113930704	113930811	(56875168)	+	(TC)n	Simple_repeat	1	109	(0)	3479368
3893	18.3	1.0	1.1	chr6	113930812	113931497	(56874482)	C	L1M3f	LINE/L1	(4628)	1937	1251	3479364
846	17.6	14.7	6.0	chr6	114519405	114519639	(56286340)	C	MLT2B1	LTR/ERVL	(44)	476	218	3480247
42	7.7	0.0	0.0	chr6	114519640	114519695	(56286284)	+	(AG)n	Simple_repeat	1	56	(0)	3480248
2145	16.5	5.6	3.2	chr6	114519696	114520205	(56285774)	C	MLT2A2	LTR/ERVL	(6)	548	4	3480249
288	26.6	9.9	7.5	chr6	114646407	114646517	(56159462)	C	L1MCc	LINE/L1	(5568)	884	769	3480413
46	6.0	0.0	0.0	chr6	114646629	114646681	(56159298)	+	(TC)n	Simple_repeat	1	53	(0)	3480415
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
38	2.8	0.0	0.0	chr6	116494350	116494386	(54311593)	+	(AG)n	Simple_repeat	1	37	(0)	3482639
2371	19.3	4.3	7.4	chr6	116521172	116521761	(54284218)	C	MLT2B3	LTR/ERVL	(26)	691	117	3482670
381	30.8	11.1	5.6	chr6	116521762	116522133	(54283846)	+	MLT1H1	LTR/ERVL-MaLR	1	397	(194)	3482671
366	21.8	5.1	1.8	chr6	116522222	116522388	(54283591)	+	MLT1H1	LTR/ERVL-MaLR	409	579	(0)	3482671
36	0.0	0.0	0.0	chr6	116544152	116544182	(54261797)	+	(AG)n	Simple_repeat	1	31	(0)	3482702
455	36.4	7.3	5.2	chr6	116945999	116946653	(53859326)	C	L2	LINE/L2	(1035)	2384	1715	3483277
21	4.0	0.0	0.0	chr6	117265268	117265293	(53540686)	+	(TC)n	Simple_repeat	1	26	(0)	3483668
11	18.8	4.3	4.2	chr6	117482790	117482835	(53323144)	+	(CGGCGG)n	Simple_repeat	1	48	(0)	3483950
15	0.0	4.0	3.9	chr6	117907478	117907502	(52898477)	+	(CGG)n	Simple_repeat	1	26	(0)	3484467
20	17.4	2.2	0.0	chr6	118635817	118635861	(52170118)	+	(TCAC)n	Simple_repeat	1	46	(0)	3485423
225	29.7	5.2	1.1	chr6	118635890	118635981	(52169998)	+	L4_C_Mam	LINE/RTE-X	3784	3879	(1259)	3485424
898	22.7	4.7	0.0	chr6	118635983	118636185	(52169794)	C	MER58A	DNA/hAT-Charlie	(11)	213	1	3485425
240	28.8	15.0	7.4	chr6	119113304	119113523	(51692456)	+	L2	LINE/L2	428	667	(2752)	3486142
1969	12.0	5.1	4.2	chr6	119113524	119113618	(51692361)	+	MER44A	DNA/TcMar-Tigger	5	112	(227)	3486143
34	3.0	0.0	0.0	chr6	119113619	119113652	(51692327)	+	(GA)n	Simple_repeat	1	34	(0)	3486144
1969	12.0	5.1	4.2	chr6	119113653	119113676	(51692303)	+	MER44A	DNA/TcMar-Tigger	113	127	(212)	3486143
1957	12.0	1.1	0.7	chr6	119113677	119113959	(51692020)	+	AluSz	SINE/Alu	19	302	(10)	3486145
975	20.9	1.5	3.4	chr6	119137068	119137275	(51668704)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	181	3486191
16	13.2	0.0	0.0	chr6	119137276	119137300	(51668679)	+	(GT)n	Simple_repeat	1	25	(0)	3486192
28	11.2	4.2	0.0	chr6	119137307	119137354	(51668625)	+	GA-rich	Low_complexity	1	50	(0)	3486193
422	17.3	3.7	1.9	chr6	119137360	119137465	(51668514)	C	MLT1B	LTR/ERVL-MaLR	(215)	175	68	3486191
648	18.8	2.6	0.0	chr6	119137470	119137581	(51668398)	C	MLT1B	LTR/ERVL-MaLR	(259)	115	1	3486191
38	9.9	0.0	0.0	chr6	119868858	119868912	(50937067)	+	(TC)n	Simple_repeat	1	55	(0)	3487130
1483	21.6	4.9	1.7	chr6	122407776	122407961	(48398018)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	189	3490376
30	0.0	0.0	0.0	chr6	122407962	122407987	(48397992)	+	(AG)n	Simple_repeat	1	26	(0)	3490377
1483	21.6	4.9	1.7	chr6	122407988	122408154	(48397825)	C	MLT1A	LTR/ERVL-MaLR	(186)	188	10	3490376
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
258	27.1	9.7	2.8	chr6	123360419	123360600	(47445379)	C	L2-3_Crp	LINE/L2	(1143)	953	758	3491589
53	14.2	0.0	0.0	chr6	123360670	123360754	(47445225)	+	(GA)n	Simple_repeat	1	85	(0)	3491590
38	0.0	0.0	0.0	chr6	123381957	123381989	(47423990)	+	(CT)n	Simple_repeat	1	33	(0)	3491616
222	36.8	3.2	4.7	chr6	123841457	123841647	(46964332)	+	MamRTE1	LINE/RTE-BovB	1830	2017	(1795)	3492237
2257	34.6	10.6	5.5	chr6	124703610	124705798	(46100181)	+	L3	LINE/CR1	544	2856	(1243)	3493322
25	6.3	0.0	0.0	chr6	124884333	124884365	(45921614)	+	(TC)n	Simple_repeat	1	33	(0)	3493532
18	22.1	0.0	0.0	chr6	124961901	124961943	(45844036)	+	(GTGC)n	Simple_repeat	1	43	(0)	3493631
15314	12.9	1.6	0.7	chr6	125151313	125153651	(45652328)	+	Tigger1	DNA/TcMar-Tigger	55	2416	(2)	3493929
936	24.8	2.0	3.3	chr6	125352332	125352817	(45453162)	C	MSTD	LTR/ERVL-MaLR	(0)	465	3	3494208
46	2.2	0.0	2.1	chr6	125622774	125622821	(45183158)	+	(TC)n	Simple_repeat	1	48	(0)	3494595
60	3.4	0.0	0.0	chr6	125622912	125622971	(45183008)	+	(CT)n	Simple_repeat	1	60	(0)	3494596
72	12.9	0.7	4.3	chr6	125622972	125623111	(45182868)	+	(AT)n	Simple_repeat	1	141	(0)	3494597
31	14.2	5.4	2.6	chr6	125818529	125818602	(44987377)	+	GA-rich	Low_complexity	1	78	(0)	3494864
38	2.8	0.0	0.0	chr6	126237060	126237096	(44568883)	+	(AG)n	Simple_repeat	1	37	(0)	3495423
351	30.9	8.0	6.3	chr6	126710641	126710861	(44095118)	+	MLT1L	LTR/ERVL-MaLR	52	276	(334)	3495949
42	2.3	2.3	0.0	chr6	126710979	126711022	(44094957)	+	(AG)n	Simple_repeat	1	45	(0)	3495950
287	25.4	1.5	0.0	chr6	126711023	126711089	(44094890)	+	MLT1L	LTR/ERVL-MaLR	443	510	(100)	3495949
432	29.4	3.8	0.0	chr6	126711146	126711271	(44094708)	+	MIR	SINE/MIR	2	132	(130)	3495951
36	6.6	2.1	0.0	chr6	126812744	126812791	(43993188)	+	(CT)n	Simple_repeat	1	49	(0)	3496050
44	0.0	2.2	2.1	chr6	126814988	126815033	(43990946)	+	(GA)n	Simple_repeat	1	47	(0)	3496052
37	14.1	1.6	0.0	chr6	128553156	128553218	(42252761)	+	GA-rich	Low_complexity	1	64	(0)	3498315
172	0.0	0.0	0.0	chr6	128604342	128604490	(42201489)	+	(CGGGAGAG)n	Simple_repeat	1	149	(0)	3498387
274	22.4	0.0	4.3	chr6	128625340	128625409	(42180570)	C	MER5B	DNA/hAT-Charlie	(48)	130	64	3498428
38	0.0	0.0	0.0	chr6	128625423	128625455	(42180524)	+	(AG)n	Simple_repeat	1	33	(0)	3498429
603	27.4	3.7	0.0	chr6	129208225	129208381	(41597598)	+	MIR	SINE/MIR	100	262	(0)	3499152
126	24.6	2.9	2.3	chr6	129208460	129208841	(41597138)	+	GA-rich	Low_complexity	1	393	(0)	3499153
75	6.1	0.0	0.0	chr6	129250992	129251077	(41554902)	+	(CT)n	Simple_repeat	1	86	(0)	3499203
25	0.0	0.0	0.0	chr6	129251078	129251105	(41554874)	+	(AT)n	Simple_repeat	1	28	(0)	3499204
54	32.7	1.9	1.9	chr6	130183744	130184001	(40621978)	+	GA-rich	Low_complexity	1	263	(0)	3500555
19	23.4	0.0	0.0	chr6	131001297	131001337	(39804642)	+	GA-rich	Low_complexity	1	41	(0)	3501671
53	0.0	0.0	0.0	chr6	131460317	131460361	(39345618)	+	(TC)n	Simple_repeat	1	45	(0)	3502376
27	2.9	2.9	0.0	chr6	131460362	131460396	(39345583)	+	(GT)n	Simple_repeat	1	36	(0)	3502377
522	19.2	11.6	0.0	chr6	131817603	131817701	(38988278)	+	AluJb	SINE/Alu	7	118	(194)	3502951
32	10.7	0.0	0.0	chr6	131817702	131817751	(38988228)	+	(TC)n	Simple_repeat	1	50	(0)	3502952
37	0.0	0.0	0.0	chr6	131817755	131817786	(38988193)	+	(AC)n	Simple_repeat	1	32	(0)	3502953
12	20.7	5.1	0.0	chr6	131817792	131817830	(38988149)	+	(TATA)n	Simple_repeat	1	41	(0)	3502954
13	18.1	0.0	4.9	chr6	131951186	131951226	(38854753)	+	(GGCGAGC)n	Simple_repeat	1	41	(0)	3503158
15965	20.5	8.8	6.6	chr6	132524956	132529423	(38276556)	+	MER57-int	LTR/ERV1	1	4571	(2966)	3503937
18	0.0	0.0	0.0	chr6	132973595	132973614	(37832365)	+	(AG)n	Simple_repeat	1	20	(0)	3504627
29	5.1	4.9	0.0	chr6	133208345	133208385	(37597594)	+	(TC)n	Simple_repeat	1	43	(0)	3504933
12	24.8	0.0	5.7	chr6	133241192	133241244	(37564735)	+	(CCCCCGG)n	Simple_repeat	1	53	(0)	3504977
198	28.6	0.0	0.0	chr6	133249228	133249269	(37556710)	+	MamSINE1	SINE/tRNA-RTE	48	89	(201)	3504984
56	0.0	0.0	0.0	chr6	133252943	133252990	(37552989)	+	(AC)n	Simple_repeat	1	48	(0)	3504989
1214	23.1	3.5	12.4	chr6	133355862	133356272	(37449707)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	2	3505135
48	2.1	2.0	0.0	chr6	133502040	133502088	(37303891)	+	(CT)n	Simple_repeat	1	50	(0)	3505315
38	2.8	0.0	0.0	chr6	133895003	133895039	(36910940)	+	(CT)n	Simple_repeat	1	37	(0)	3505836
2142	10.9	0.0	0.7	chr6	134140358	134140642	(36665337)	+	AluSg	SINE/Alu	2	284	(26)	3506258
1020	21.6	11.2	7.5	chr6	134140643	134140839	(36665140)	+	L1MC4	LINE/L1	6645	6884	(1158)	3506257
22	11.3	6.5	10.6	chr6	134328232	134328341	(36477638)	+	(TTCTTC)n	Simple_repeat	1	105	(0)	3506681
1774	18.4	2.7	2.3	chr6	134328342	134328640	(36477339)	C	AluJr	SINE/Alu	(12)	300	1	3506682
22	3.8	0.0	0.0	chr6	134341785	134341811	(36464168)	+	(GA)n	Simple_repeat	1	27	(0)	3506714
350	30.9	10.8	5.5	chr6	134341814	134342050	(36463929)	+	MIRc	SINE/MIR	2	234	(34)	3506715
3914	22.1	7.0	7.1	chr6	135080813	135081218	(35724761)	+	L1M4a2	LINE/L1	874	1237	(1419)	3507925
2124	14.9	0.3	0.0	chr6	135081219	135081545	(35724434)	C	AluJb	SINE/Alu	(0)	312	2	3507926
535	20.5	8.0	5.8	chr6	135183845	135184015	(35621964)	C	MIR3	SINE/MIR	(19)	189	15	3508092
12	7.8	3.2	6.2	chr6	135689127	135689157	(35116822)	+	(GTGA)n	Simple_repeat	1	32	(0)	3508797
44	0.0	0.0	0.0	chr6	135689162	135689199	(35116780)	+	(GA)n	Simple_repeat	1	38	(0)	3508798
42	3.9	1.9	0.0	chr6	135705008	135705060	(35100919)	+	(GA)n	Simple_repeat	1	54	(0)	3508827
555	14.3	0.0	2.4	chr6	136288262	136288345	(34517634)	C	AluJb	SINE/Alu	(24)	288	207	3509622
605	32.3	7.8	1.9	chr6	136403294	136403510	(34402469)	C	MIR	SINE/MIR	(23)	245	7	3509828
379	29.0	12.4	1.2	chr6	136599367	136599475	(34206504)	C	MamRep137	DNA/TcMar-Tigger	(303)	207	85	3510139
33	0.0	0.0	0.0	chr6	136599476	136599503	(34206476)	+	(TC)n	Simple_repeat	1	28	(0)	3510140
379	29.0	12.4	1.2	chr6	136599504	136599564	(34206415)	C	MamRep137	DNA/TcMar-Tigger	(426)	84	15	3510139
242	31.6	0.0	2.0	chr6	136599637	136599736	(34206243)	C	MIR	SINE/MIR	(36)	226	129	3510141
305	23.0	6.5	2.0	chr6	136655398	136655499	(34150480)	C	Tigger19b	DNA/TcMar-Tigger	(387)	163	57	3510233
14	26.3	0.0	9.8	chr6	136662505	136662586	(34143393)	+	(CTTC)n	Simple_repeat	1	82	(0)	3510247
249	28.8	1.7	1.7	chr6	136662612	136662731	(34143248)	C	L1ME4c	LINE/L1	(377)	453	334	3510248
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
23	0.0	0.0	0.0	chr6	136952850	136952874	(33853105)	+	(TG)n	Simple_repeat	1	25	(0)	3510735
34	3.0	0.0	0.0	chr6	136952875	136952908	(33853071)	+	(GA)n	Simple_repeat	1	34	(0)	3510736
446	28.0	5.2	2.1	chr6	136953027	136953212	(33852767)	C	MIRb	SINE/MIR	(0)	268	77	3510737
570	23.3	4.8	2.5	chr6	136953215	136953377	(33852602)	+	MER96	DNA/hAT-Tip100	8	174	(1)	3510738
334	23.8	0.0	13.7	chr6	136961802	136961918	(33844061)	+	MIR	SINE/MIR	8	108	(154)	3510753
29	0.0	0.0	0.0	chr6	136962044	136962068	(33843911)	+	(AG)n	Simple_repeat	1	25	(0)	3510754
185	24.4	3.7	10.3	chr6	136962114	136962200	(33843779)	+	L2c	LINE/L2	3289	3369	(18)	3510755
21	7.7	0.0	0.0	chr6	137272547	137272574	(33533405)	+	(TC)n	Simple_repeat	1	28	(0)	3511235
38	17.9	0.0	0.0	chr6	137333578	137333646	(33472333)	+	GA-rich	Low_complexity	1	69	(0)	3511325
2572	20.2	9.1	0.7	chr6	137665033	137665644	(33140335)	C	LTR65	LTR/ERV1	(0)	669	1	3511791
1318	33.4	11.2	1.6	chr6	138048590	138048933	(32757046)	+	L2a	LINE/L2	3018	3406	(20)	3512395
35	0.0	5.4	0.0	chr6	138049055	138049091	(32756888)	+	(TC)n	Simple_repeat	1	39	(0)	3512397
89	17.9	2.2	4.3	chr6	138063266	138063465	(32742514)	+	A-rich	Low_complexity	1	194	(0)	3512410
2540	7.0	0.3	1.0	chr6	138063466	138063807	(32742172)	+	AluY	SINE/Alu	1	311	(0)	3512411
1820	18.6	0.3	2.2	chr6	138503949	138504260	(32301719)	+	AluJr4	SINE/Alu	1	306	(6)	3513070
342	31.3	3.9	0.0	chr6	138504280	138504378	(32301601)	C	L2c	LINE/L2	(32)	3355	3253	3513071
28	5.9	0.0	0.0	chr6	138569236	138569271	(32236708)	+	(TG)n	Simple_repeat	1	36	(0)	3513164
40	12.7	2.9	0.0	chr6	138569271	138569339	(32236640)	+	GA-rich	Low_complexity	1	71	(0)	3513165
256	20.8	0.0	0.0	chr6	138814349	138814396	(31991583)	+	MIRc	SINE/MIR	207	254	(14)	3513604
1616	12.3	14.7	2.4	chr6	138946872	138947035	(31858944)	+	THE1D	LTR/ERVL-MaLR	2	211	(170)	3513825
48	0.0	0.0	0.0	chr6	138947036	138947076	(31858903)	+	(CT)n	Simple_repeat	1	41	(0)	3513826
1616	12.3	14.7	2.4	chr6	138947077	138947243	(31858736)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	3513825
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
31	0.0	0.0	0.0	chr6	139152419	139152445	(31653534)	+	(TG)n	Simple_repeat	1	27	(0)	3514207
191	23.6	1.4	1.4	chr6	140968784	140969280	(29836699)	+	GA-rich	Low_complexity	1	504	(0)	3516703
46	0.0	0.0	0.0	chr6	141384599	141384637	(29421342)	+	(TC)n	Simple_repeat	1	39	(0)	3517195
240	15.4	0.0	0.0	chr6	141384640	141384678	(29421301)	+	MER63D	DNA/hAT-Blackjack	992	1030	(31)	3517196
282	34.4	5.2	9.8	chr6	141755727	141755829	(29050150)	C	L2	LINE/L2	(937)	2482	2384	3517656
38	2.8	0.0	0.0	chr6	141755830	141755866	(29050113)	+	(GT)n	Simple_repeat	1	37	(0)	3517657
48	4.2	0.0	0.0	chr6	141755869	141755918	(29050061)	+	(AG)n	Simple_repeat	1	50	(0)	3517658
282	34.4	5.2	9.8	chr6	141755919	141756352	(29049627)	C	L2	LINE/L2	(1036)	2383	1968	3517656
280	37.5	2.0	5.0	chr6	142187226	142187427	(28618552)	C	L2a	LINE/L2	(1244)	2175	1980	3518164
12	9.3	0.0	4.0	chr6	142301821	142301845	(28504134)	+	(CGC)n	Simple_repeat	1	25	(0)	3518336
218	30.1	6.4	1.4	chr6	142376359	142376432	(28429547)	C	L2c	LINE/L2	(3)	3384	3307	3518435
365	32.9	12.9	1.3	chr6	142378329	142378485	(28427494)	+	MamTip2	DNA/hAT-Tip100	33	210	(95)	3518438
1803	14.7	0.7	4.2	chr6	142682434	142682718	(28123261)	+	AluJb	SINE/Alu	1	275	(37)	3518832
67	3.1	0.0	0.0	chr6	142682719	142682784	(28123195)	+	(CT)n	Simple_repeat	1	66	(0)	3518833
53	8.1	1.2	1.2	chr6	142793615	142793696	(28012283)	+	(CTTT)n	Simple_repeat	1	83	(0)	3518985
260	19.6	0.0	3.5	chr6	142793706	142793763	(28012216)	C	AluJb	SINE/Alu	(1)	301	246	3518986
1248	18.0	0.0	0.0	chr6	142793773	142793966	(28012013)	C	AluJb	SINE/Alu	(118)	194	1	3518986
34	0.0	3.0	0.0	chr6	142820290	142820322	(27985657)	+	(CT)n	Simple_repeat	1	34	(0)	3519031
1253	12.3	0.6	0.0	chr6	142935957	142936126	(27869853)	+	AluJb	SINE/Alu	127	297	(15)	3519168
2138	11.2	1.0	0.0	chr6	142936202	142936487	(27869492)	C	AluSx4	SINE/Alu	(21)	289	1	3519169
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
1021	28.4	4.6	6.8	chr6	143375982	143376426	(27429553)	C	HAL1	LINE/L1	(804)	1703	1269	3519776
40	1.9	3.4	4.9	chr6	143376427	143376485	(27429494)	+	(CT)n	Simple_repeat	1	61	(0)	3519780
1021	28.4	4.6	6.8	chr6	143376486	143376507	(27429472)	C	HAL1	LINE/L1	(1239)	1268	1247	3519776
2522	12.7	0.3	0.3	chr6	143376543	143376906	(27429073)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3519781
40	9.3	0.0	0.0	chr6	143383900	143383956	(27422023)	+	(CT)n	Simple_repeat	1	57	(0)	3519795
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
19	16.3	0.0	0.0	chr6	143511562	143511597	(27294382)	+	(GCA)n	Simple_repeat	1	36	(0)	3519988
15	21.8	2.9	0.0	chr6	144216902	144216935	(26589044)	+	(TC)n	Simple_repeat	1	35	(0)	3521046
40	5.8	1.8	1.8	chr6	144493482	144493537	(26312442)	+	(TC)n	Simple_repeat	1	57	(0)	3521515
223	27.2	15.6	2.6	chr6	145815054	145815170	(24990809)	C	MIR3	SINE/MIR	(60)	148	14	3523215
181	28.0	1.3	2.6	chr6	145850174	145850250	(24955729)	C	L2c	LINE/L2	(278)	3109	3034	3523261
75	11.0	0.0	0.0	chr6	145850304	145850412	(24955567)	+	(GA)n	Simple_repeat	1	109	(0)	3523262
18	22.2	5.8	0.0	chr6	145850412	145850463	(24955516)	+	(GT)n	Simple_repeat	1	55	(0)	3523263
49	0.0	0.0	0.0	chr6	145867632	145867673	(24938306)	+	(AG)n	Simple_repeat	1	42	(0)	3523289
782	25.3	6.9	15.5	chr6	145867674	145867899	(24938080)	+	MLT1D	LTR/ERVL-MaLR	295	505	(0)	3523288
38	11.2	0.0	1.7	chr6	146494084	146494143	(24311836)	+	(AG)n	Simple_repeat	1	60	(0)	3524101
50	0.0	0.0	0.0	chr6	146494229	146494271	(24311708)	+	(GT)n	Simple_repeat	1	43	(0)	3524102
5115	15.9	6.2	4.5	chr6	147790286	147790732	(23015247)	+	Ricksha_b	DNA/MULE-MuDR	2	571	(684)	3525910
111	2.7	1.7	0.0	chr6	147790733	147790847	(23015132)	+	(TC)n	Simple_repeat	1	117	(0)	3525911
5115	14.1	8.3	2.9	chr6	147790848	147791012	(23014967)	+	Ricksha_b	DNA/MULE-MuDR	572	746	(509)	3525910
571	12.5	3.7	3.7	chr6	148789256	148789363	(22016616)	+	MER5A1	DNA/hAT-Charlie	6	113	(53)	3527447
24	0.0	0.0	0.0	chr6	148789427	148789453	(22016526)	+	(TC)n	Simple_repeat	1	27	(0)	3527448
36	0.0	0.0	0.0	chr6	148789454	148789484	(22016495)	+	(CA)n	Simple_repeat	1	31	(0)	3527449
1892	11.9	0.0	14.3	chr6	148789562	148789897	(22016082)	C	AluSx1	SINE/Alu	(24)	288	1	3527450
1431	20.9	10.2	2.3	chr6	148870944	148871110	(21934869)	+	MLT1A	LTR/ERVL-MaLR	1	173	(201)	3527575
56	5.7	2.7	0.0	chr6	148871111	148871183	(21934796)	+	(TC)n	Simple_repeat	1	75	(0)	3527576
1431	20.9	10.2	2.3	chr6	148871184	148871358	(21934621)	+	MLT1A	LTR/ERVL-MaLR	174	373	(1)	3527575
474	27.6	4.5	3.0	chr6	149034620	149034817	(21771162)	C	HAL1	LINE/L1	(710)	1797	1597	3527827
73	0.0	0.0	0.0	chr6	149034835	149034896	(21771083)	+	(TC)n	Simple_repeat	1	62	(0)	3527828
1017	26.5	11.4	5.0	chr6	149034900	149035473	(21770506)	C	HAL1	LINE/L1	(969)	1496	799	3527827
2068	22.7	1.9	6.7	chr6	149207680	149207860	(21598119)	C	MLT1C	LTR/ERVL-MaLR	(293)	174	1	3528057
1238	29.6	10.5	3.0	chr6	149207871	149207897	(21598082)	+	LTR33A_	LTR/ERVL	16	58	(473)	3528059
35	2.8	0.0	2.6	chr6	149207898	149207936	(21598043)	+	(CT)n	Simple_repeat	1	39	(0)	3528060
1238	29.6	10.5	3.0	chr6	149207937	149208381	(21597598)	+	LTR33A_	LTR/ERVL	59	528	(3)	3528059
276	11.4	1.6	6.1	chr6	149249409	149249539	(21556440)	C	HERV17-int	LTR/ERV1	(7793)	833	709	3528117
67	19.4	2.6	0.0	chr6	149249540	149249691	(21556288)	+	(CTGTCT)n	Simple_repeat	1	156	(0)	3528118
62	27.4	0.0	0.6	chr6	149249692	149249711	(21556268)	+	(CTCT)n	Simple_repeat	1	172	(0)	3528119
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
16	32.6	0.0	0.0	chr6	149317603	149317663	(21488316)	+	G-rich	Low_complexity	1	61	(0)	3528246
61	0.0	0.0	0.0	chr6	149423585	149423636	(21382343)	+	(TC)n	Simple_repeat	1	52	(0)	3528410
28	24.9	2.0	2.9	chr6	149566288	149566388	(21239591)	+	(CCCGC)n	Simple_repeat	1	100	(0)	3528682
13	9.7	5.7	2.7	chr6	149864264	149864298	(20941681)	+	(GCCCTGC)n	Simple_repeat	1	37	(0)	3529318
804	28.8	3.8	0.4	chr6	150134600	150134850	(20671129)	+	Charlie10	DNA/hAT-Charlie	1	260	(2562)	3529733
15	18.4	0.0	7.8	chr6	150143197	150143247	(20662732)	+	(CGG)n	Simple_repeat	1	51	(0)	3529746
221	23.1	0.0	3.7	chr6	150196320	150196373	(20609606)	C	L2a	LINE/L2	(2)	3424	3373	3529841
902	18.5	0.7	0.0	chr6	150282412	150282557	(20523422)	+	AluJo	SINE/Alu	145	291	(21)	3529969
32	5.2	0.0	0.0	chr6	150282561	150282600	(20523379)	+	(AG)n	Simple_repeat	1	40	(0)	3529970
2972	17.1	6.4	0.2	chr6	150282680	150283193	(20522786)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	3529971
19	0.0	0.0	0.0	chr6	150502517	150502537	(20303442)	+	(TC)n	Simple_repeat	1	21	(0)	3530316
44	0.0	0.0	0.0	chr6	150502538	150502575	(20303404)	+	(CA)n	Simple_repeat	1	38	(0)	3530317
2580	13.3	2.3	5.8	chr6	150520436	150520643	(20285336)	+	MSTB1	LTR/ERVL-MaLR	1	215	(217)	3530348
60	1.8	0.0	0.0	chr6	150520644	150520699	(20285280)	+	(TC)n	Simple_repeat	1	56	(0)	3530349
2580	13.3	2.3	5.8	chr6	150520700	150520938	(20285041)	+	MSTB1	LTR/ERVL-MaLR	216	432	(0)	3530348
67	1.6	1.5	0.0	chr6	150674619	150674683	(20131296)	+	(TC)n	Simple_repeat	1	66	(0)	3530573
2194	11.1	0.0	0.0	chr6	150674704	150674982	(20130997)	C	AluSx1	SINE/Alu	(33)	279	1	3530574
1929	15.2	0.7	0.7	chr6	150754981	150755275	(20050704)	C	AluJr	SINE/Alu	(17)	295	1	3530691
15	18.5	0.0	6.1	chr6	150865621	150865669	(19940310)	+	(CCGGCCG)n	Simple_repeat	1	49	(0)	3530872
28	0.0	0.0	0.0	chr6	150865722	150865747	(19940232)	+	(CCG)n	Simple_repeat	1	26	(0)	3530873
46	6.0	0.0	0.0	chr6	151069242	151069294	(19736685)	+	(TC)n	Simple_repeat	1	53	(0)	3531262
458	27.6	9.0	1.0	chr6	151159727	151159920	(19646059)	C	MIR	SINE/MIR	(21)	241	31	3531451
30	2.5	5.0	0.0	chr6	151159923	151159962	(19646017)	+	(GA)n	Simple_repeat	1	42	(0)	3531452
644	16.4	7.6	4.7	chr6	151171621	151171748	(19634231)	C	FLAM_A	SINE/Alu	(9)	133	2	3531471
113	23.6	3.0	2.9	chr6	151171749	151171917	(19634062)	+	(TTTC)n	Simple_repeat	3	169	(0)	3531472
54	0.0	3.6	0.0	chr6	151171918	151171973	(19634006)	+	(TCCCTTCCCC)n	Simple_repeat	1	58	(0)	3531473
47	8.3	0.0	0.0	chr6	151171982	151172046	(19633933)	+	(TTTC)n	Simple_repeat	1	65	(0)	3531474
33	4.6	2.2	0.0	chr6	151345934	151345976	(19460003)	+	(GA)n	Simple_repeat	1	44	(0)	3531833
232	17.2	4.9	3.3	chr6	151345980	151346039	(19459940)	C	L1ME4a	LINE/L1	(189)	5935	5875	3531834
49	0.0	0.0	0.0	chr6	151669148	151669189	(19136790)	+	(GA)n	Simple_repeat	1	42	(0)	3532437
346	25.8	3.0	1.0	chr6	151850297	151850394	(18955585)	+	MLT1C	LTR/ERVL-MaLR	137	236	(231)	3532716
52	9.4	6.5	0.0	chr6	151850395	151850486	(18955493)	+	GA-rich	Low_complexity	1	98	(0)	3532717
41	2.6	0.0	0.0	chr6	152093331	152093370	(18712609)	+	(TC)n	Simple_repeat	1	40	(0)	3533036
33	5.7	0.0	0.0	chr6	152097126	152097162	(18708817)	+	(TC)n	Simple_repeat	1	37	(0)	3533042
24	3.6	0.0	0.0	chr6	152097164	152097192	(18708787)	+	(AC)n	Simple_repeat	1	29	(0)	3533043
18	30.4	0.0	2.9	chr6	153131242	153131310	(17674669)	+	GA-rich	Low_complexity	1	69	(0)	3534483
45	0.0	0.0	0.0	chr6	153914446	153914497	(16891482)	+	(TCTT)n	Simple_repeat	1	52	(0)	3535545
102	1.1	0.0	0.0	chr6	153914498	153914588	(16891391)	+	(TC)n	Simple_repeat	1	91	(0)	3535546
1992	12.4	0.0	0.0	chr6	153914592	153914858	(16891121)	C	AluSc	SINE/Alu	(1)	308	42	3535547
1572	11.3	9.1	0.0	chr6	153984399	153984629	(16821350)	+	AluSx1	SINE/Alu	40	293	(19)	3535643
86	22.2	2.1	0.0	chr6	153984630	153984823	(16821156)	+	GA-rich	Low_complexity	1	198	(0)	3535644
20	0.0	0.0	0.0	chr6	154454083	154454104	(16351875)	+	(AC)n	Simple_repeat	1	22	(0)	3536415
48	0.0	0.0	0.0	chr6	154454105	154454145	(16351834)	+	(AG)n	Simple_repeat	1	41	(0)	3536416
486	31.4	9.3	0.0	chr6	154454159	154454343	(16351636)	+	MIR	SINE/MIR	54	257	(5)	3536417
44	1.9	5.3	1.7	chr6	154559816	154559872	(16246107)	+	(TC)n	Simple_repeat	1	60	(0)	3536618
52	2.1	0.0	0.0	chr6	154796354	154796402	(16009577)	+	(TC)n	Simple_repeat	1	49	(0)	3537078
385	28.6	7.2	2.1	chr6	154852531	154852681	(15953298)	+	MIR	SINE/MIR	93	266	(2)	3537158
765	31.8	9.3	0.3	chr6	155016007	155016318	(15789661)	+	L1ME3G	LINE/L1	199	541	(383)	3537479
93	2.1	2.1	0.0	chr6	155047651	155047745	(15758234)	+	(GA)n	Simple_repeat	1	97	(0)	3537533
22	3.9	0.0	0.0	chr6	155140547	155140573	(15665406)	+	(TG)n	Simple_repeat	1	27	(0)	3537711
51	0.0	0.0	0.0	chr6	155140574	155140617	(15665362)	+	(GA)n	Simple_repeat	1	44	(0)	3537712
292	32.0	13.8	0.0	chr6	155140649	155140848	(15665131)	+	L3	LINE/CR1	3670	3901	(198)	3537709
405	26.7	3.7	0.0	chr6	156557394	156557524	(14248455)	+	L2b	LINE/L2	3233	3368	(7)	3539625
87	22.4	1.5	0.5	chr6	156599931	156600133	(14205846)	+	(CT)n	Simple_repeat	1	206	(0)	3539697
21	14.8	0.0	0.0	chr6	156600148	156600186	(14205793)	+	(AGAG)n	Simple_repeat	1	39	(0)	3539698
28	0.0	3.3	0.0	chr6	156686525	156686554	(14119425)	+	(CTCTCCT)n	Simple_repeat	1	31	(0)	3539815
2232	11.8	0.0	0.3	chr6	156756314	156756610	(14049369)	C	AluSx	SINE/Alu	(12)	300	5	3539959
106	30.6	1.7	3.2	chr6	156756620	156757023	(14048956)	+	A-rich	Low_complexity	1	411	(0)	3539960
25	0.0	0.0	0.0	chr6	156856673	156856700	(13949279)	+	(CT)n	Simple_repeat	1	28	(0)	3540109
1778	14.4	3.6	1.3	chr6	156986897	156987159	(13818820)	+	AluJo	SINE/Alu	1	264	(48)	3540273
46	0.0	0.0	0.0	chr6	156987160	156987198	(13818781)	+	(AG)n	Simple_repeat	1	39	(0)	3540274
1778	14.4	3.6	1.3	chr6	156987199	156987233	(13818746)	+	AluJo	SINE/Alu	274	306	(6)	3540273
171	13.2	0.9	3.6	chr6	157039610	157039937	(13766042)	+	(CTTC)n	Simple_repeat	1	331	(0)	3540344
2307	9.7	3.2	0.0	chr6	157039940	157040237	(13765742)	C	AluSc	SINE/Alu	(1)	308	1	3540345
380	20.6	3.2	2.1	chr6	157221227	157221320	(13584659)	C	L1MC4a	LINE/L1	(0)	7882	7788	3540566
69	37.0	0.4	0.0	chr6	157221601	157221868	(13584111)	+	(CA)n	Simple_repeat	1	269	(0)	3540567
14	21.6	4.7	0.0	chr6	157823308	157823350	(12982629)	+	(GCC)n	Simple_repeat	1	45	(0)	3541543
19	17.9	0.0	4.2	chr6	157981785	157981832	(12824147)	+	GA-rich	Low_complexity	1	48	(0)	3541773
303	30.1	14.1	3.5	chr6	158286764	158286990	(12518989)	C	Tigger15a	DNA/TcMar-Tigger	(59)	656	402	3542295
292	30.5	8.7	1.9	chr6	158286997	158287103	(12518876)	C	L2c	LINE/L2	(11)	3376	3262	3542296
4393	5.1	5.0	1.7	chr6	158405277	158405852	(12400127)	C	LTR14B	LTR/ERVK	(0)	608	13	3542481
12	9.7	0.0	0.0	chr6	158559885	158559906	(12246073)	+	(TCAT)n	Simple_repeat	1	22	(0)	3542739
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
14	9.0	5.1	4.9	chr6	158560180	158560218	(12245761)	+	G-rich	Low_complexity	1	41	(0)	3542742
223	34.0	4.4	5.9	chr6	159244728	159244868	(11561111)	+	MIRb	SINE/MIR	2	142	(126)	3543840
2293	11.6	2.4	5.6	chr6	159244869	159245262	(11560717)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3543841
268	36.8	14.3	1.9	chr6	159253062	159253548	(11552431)	+	MamRTE1	LINE/RTE-BovB	811	1368	(2444)	3543852
44	2.4	0.0	0.0	chr6	159621174	159621215	(11184764)	+	(GA)n	Simple_repeat	1	42	(0)	3544322
33	7.5	0.0	0.0	chr6	159664083	159664124	(11141855)	+	(CT)n	Simple_repeat	1	42	(0)	3544404
559	16.4	4.8	0.5	chr6	159664167	159664290	(11141689)	+	MLT1B	LTR/ERVL-MaLR	243	390	(0)	3544405
358	25.4	6.8	0.0	chr6	160178104	160178241	(10627738)	+	L1M6	LINE/L1	5558	5705	(673)	3545159
21	12.2	2.8	0.0	chr6	160178242	160178277	(10627702)	+	(GT)n	Simple_repeat	1	37	(0)	3545162
65	12.5	0.9	0.9	chr6	160178277	160178383	(10627596)	+	(GA)n	Simple_repeat	1	108	(0)	3545163
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
2104	17.1	9.2	0.3	chr6	161044638	161045025	(9760954)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3546146
1884	20.1	7.7	1.3	chr6	161469455	161469856	(9336123)	+	MLT1D	LTR/ERVL-MaLR	76	504	(1)	3546726
18	4.5	0.0	0.0	chr6	163517036	163517058	(7288921)	+	(AC)n	Simple_repeat	1	23	(0)	3549568
49	9.3	0.0	0.0	chr6	163517059	163517127	(7288852)	+	(CT)n	Simple_repeat	1	69	(0)	3549569
283	32.7	7.7	7.0	chr6	163517130	163517234	(7288745)	C	MLT2F	LTR/ERVL	(58)	339	102	3549570
571	21.9	4.4	0.7	chr6	163517235	163517386	(7288593)	C	MLT1E1	LTR/ERVL-MaLR	(349)	305	148	3549571
17	24.7	4.0	1.3	chr6	163525258	163525286	(7280693)	+	(TCTTCTT)n	Simple_repeat	1	30	(0)	3549581
35	3.9	7.5	0.0	chr6	163525287	163525339	(7280640)	+	(TC)n	Simple_repeat	1	57	(0)	3549582
17	24.7	4.0	1.3	chr6	163525340	163525362	(7280617)	+	(TCTTCTT)n	Simple_repeat	3	25	(0)	3549583
2129	11.6	0.7	3.0	chr6	163525363	163525664	(7280315)	C	AluSg	SINE/Alu	(15)	295	1	3549584
404	35.7	6.2	6.5	chr6	165445189	165445799	(5360180)	+	L1MEd	LINE/L1	5	613	(6473)	3551956
31	0.0	0.0	0.0	chr6	165445893	165445919	(5360060)	+	(AG)n	Simple_repeat	1	27	(0)	3551957
11	21.7	0.0	4.9	chr6	165445920	165445960	(5360019)	+	A-rich	Low_complexity	1	41	(0)	3551958
18	27.8	1.9	0.0	chr6	165474871	165474922	(5331057)	+	GA-rich	Low_complexity	1	53	(0)	3552001
336	26.8	8.0	5.3	chr6	165474967	165475210	(5330769)	+	L2a	LINE/L2	244	494	(2925)	3552002
16	0.0	0.0	0.0	chr6	165671695	165671712	(5134267)	+	(CA)n	Simple_repeat	1	18	(0)	3552232
15	24.1	0.0	6.0	chr6	165671712	165671761	(5134218)	+	(AT)n	Simple_repeat	1	50	(0)	3552233
782	19.6	1.9	0.0	chr6	165690769	165690921	(5115058)	+	MLT2B4	LTR/ERVL	3	158	(398)	3552264
715	18.1	4.3	0.8	chr6	165690927	165691060	(5114919)	+	MLT2B4	LTR/ERVL	354	492	(64)	3552264
42	4.7	0.0	0.0	chr6	165691063	165691107	(5114872)	+	(CT)n	Simple_repeat	1	45	(0)	3552265
5506	15.7	4.2	4.2	chr6	165738845	165740309	(5065670)	+	L1MA8	LINE/L1	5287	6762	(489)	3552316
41	2.4	2.3	0.0	chr6	165740310	165740352	(5065627)	+	(GA)n	Simple_repeat	1	44	(0)	3552318
2206	11.1	0.0	1.1	chr6	165740354	165740632	(5065347)	C	AluSc8	SINE/Alu	(35)	276	1	3552319
1013	32.2	3.7	1.9	chr6	165894202	165894727	(4911252)	+	L3	LINE/CR1	3108	3643	(456)	3552512
54	7.0	1.3	1.3	chr6	165986501	165986577	(4819402)	+	(CT)n	Simple_repeat	1	78	(0)	3552637
44	0.0	0.0	0.0	chr6	166273493	166273530	(4532449)	+	(AG)n	Simple_repeat	1	38	(0)	3553037
831	21.8	0.0	0.0	chr6	166273532	166273673	(4532306)	C	AluJb	SINE/Alu	(34)	278	137	3553038
35	2.4	0.0	0.0	chr6	166347219	166347235	(4458744)	+	(AG)n	Simple_repeat	1	17	(0)	3553141
34	0.0	0.0	0.0	chr6	166347236	166347264	(4458715)	+	(GT)n	Simple_repeat	1	29	(0)	3553142
35	2.4	0.0	0.0	chr6	166347265	166347289	(4458690)	+	(AG)n	Simple_repeat	2	26	(0)	3553143
87	13.8	0.0	0.0	chr6	166402444	166402584	(4403395)	+	(CTCCCT)n	Simple_repeat	1	141	(0)	3553227
47	3.7	3.6	0.0	chr6	167239544	167239599	(3566380)	+	(TC)n	Simple_repeat	1	58	(0)	3554190
1565	19.6	0.0	2.1	chr6	167239617	167239901	(3566078)	C	AluJb	SINE/Alu	(33)	279	1	3554191
52	12.9	2.1	0.0	chr6	167552978	167553070	(3252909)	+	(TCTCTG)n	Simple_repeat	1	95	(0)	3554556
41	20.3	1.9	1.9	chr6	167553071	167553082	(3252897)	+	(TCTCTT)n	Simple_repeat	1	107	(0)	3554557
1309	15.0	0.0	0.0	chr6	167700798	167700984	(3104995)	+	AluSx1	SINE/Alu	125	311	(1)	3554674
22	24.3	0.0	3.1	chr6	167700985	167701048	(3104931)	+	G-rich	Low_complexity	1	64	(0)	3554675
497	34.2	7.8	0.0	chr6	167857259	167857460	(2948519)	+	L3	LINE/CR1	2903	3121	(978)	3554883
38	2.8	0.0	0.0	chr6	167878587	167878623	(2927356)	+	(CT)n	Simple_repeat	1	37	(0)	3554911
514	29.1	11.8	2.9	chr6	167878636	167879137	(2926842)	+	L2a	LINE/L2	2838	3377	(49)	3554912
49	10.1	0.0	0.0	chr6	168451567	168451640	(2354339)	+	(CTCT)n	Simple_repeat	1	74	(0)	3555501
312	31.6	10.6	6.5	chr6	168453445	168453876	(2352103)	C	L1MEd	LINE/L1	(5709)	1377	872	3555502
261	18.0	5.9	9.8	chr6	168864813	168864935	(1941044)	C	HERVFH19-int	LTR/ERV1	(7323)	396	279	3555895
102	18.7	6.4	0.7	chr6	170027912	170028193	(777786)	+	(GAGACA)n	Simple_repeat	1	300	(0)	3557076
264	19.1	1.4	2.1	chr6	170028196	170028339	(777640)	+	HERV17-int	LTR/ERV1	710	852	(7774)	3557077
258	20.2	0.5	1.1	chr6	170173967	170174151	(631828)	+	HERVIP10FH-int	LTR/ERV1	802	985	(4117)	3557202
13	26.8	2.2	0.0	chr6	170584448	170584492	(221487)	+	(CCCG)n	Simple_repeat	1	46	(0)	3557615
27	23.6	5.3	2.5	chr7	149147	149260	(159196713)	+	(GCCTGC)n	Simple_repeat	1	120	(0)	3558013
429	26.4	7.1	2.0	chr7	321091	321237	(159024736)	+	MIRb	SINE/MIR	46	200	(68)	3558189
2084	14.7	0.0	0.3	chr7	448969	449268	(158896705)	+	AluSz	SINE/Alu	1	299	(13)	3558359
23	21.9	1.6	1.6	chr7	449270	449331	(158896642)	+	GA-rich	Low_complexity	1	63	(0)	3558360
203	20.2	3.2	0.2	chr7	451176	451641	(158894332)	+	(CT)n	Simple_repeat	1	481	(0)	3558364
17	4.2	0.0	0.0	chr7	498311	498335	(158847638)	+	(TCTC)n	Simple_repeat	1	25	(0)	3558416
15	11.3	4.8	4.5	chr7	521821	521862	(158824111)	+	G-rich	Low_complexity	1	44	(0)	3558448
833	10.5	0.0	0.0	chr7	813173	813277	(158532696)	+	AluSq2	SINE/Alu	207	311	(2)	3558948
12	18.5	0.0	7.1	chr7	816826	816867	(158529106)	+	(CCGCC)n	Simple_repeat	1	42	(0)	3558956
19	24.3	2.6	3.8	chr7	876805	876882	(158469091)	+	(CCCCG)n	Simple_repeat	1	80	(0)	3559024
26	0.0	0.0	0.0	chr7	1504782	1504806	(157841167)	+	(AAT)n	Simple_repeat	1	25	(0)	3559982
1834	14.8	2.3	1.4	chr7	1569486	1569782	(157776191)	+	AluJr	SINE/Alu	1	300	(12)	3560095
12	14.3	4.8	4.5	chr7	1569883	1569924	(157776049)	+	(CCTCGG)n	Simple_repeat	1	44	(0)	3560096
86	15.1	6.7	0.5	chr7	1607082	1607276	(157738697)	+	(CT)n	Simple_repeat	1	208	(0)	3560164
395	30.6	4.5	1.0	chr7	1695982	1696176	(157649797)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	173	3560326
23	7.2	0.0	0.0	chr7	1696177	1696206	(157649767)	+	(TG)n	Simple_repeat	1	30	(0)	3560327
1884	15.9	0.3	3.4	chr7	1696381	1696701	(157649272)	C	AluJr	SINE/Alu	(1)	311	1	3560328
70	3.0	0.0	0.0	chr7	1711559	1711627	(157634346)	+	(AG)n	Simple_repeat	1	69	(0)	3560353
344	33.8	7.7	4.7	chr7	3278955	3279171	(156066802)	C	L2a	LINE/L2	(608)	2811	2576	3563035
167	23.8	2.8	0.9	chr7	3279177	3279609	(156066364)	+	GA-rich	Low_complexity	1	445	(0)	3563051
257	21.8	6.4	0.5	chr7	4484293	4485042	(154860931)	+	GA-rich	Low_complexity	1	798	(0)	3564933
1943	15.3	2.3	0.0	chr7	4705182	4705481	(154640492)	C	AluJo	SINE/Alu	(5)	307	1	3565433
57	5.0	0.0	0.0	chr7	4705512	4705573	(154640400)	+	(TC)n	Simple_repeat	1	62	(0)	3565434
1721	12.3	1.5	1.5	chr7	4705574	4705834	(154640139)	C	AluSc	SINE/Alu	(48)	261	1	3565435
2197	15.2	0.0	0.0	chr7	5176660	5176969	(154169004)	+	AluSx	SINE/Alu	1	310	(2)	3566441
23	28.2	4.8	0.0	chr7	5356795	5356877	(153989096)	+	GA-rich	Low_complexity	1	87	(0)	3566839
18	25.1	1.4	5.3	chr7	5424138	5424160	(153921813)	+	(CCT)n	Simple_repeat	1	73	(0)	3566999
13	20.7	6.1	1.9	chr7	5424161	5424209	(153921764)	+	(CCCT)n	Simple_repeat	1	52	(0)	3567000
14	23.8	0.0	2.2	chr7	5424357	5424402	(153921571)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3567001
1391	12.1	0.5	1.0	chr7	5776724	5776929	(153569044)	+	AluSz6	SINE/Alu	108	312	(0)	3567781
31	7.3	3.0	5.9	chr7	5776930	5776944	(153569029)	+	GA-rich	Low_complexity	1	26	(42)	3567782
15	21.1	0.0	0.0	chr7	5776945	5776973	(153569000)	+	A-rich	Low_complexity	1	29	(0)	3567783
31	7.3	3.0	5.9	chr7	5776974	5776995	(153568978)	+	GA-rich	Low_complexity	27	68	(0)	3567782
367	24.5	11.3	9.0	chr7	5777025	5777352	(153568621)	+	MLT1G1	LTR/ERVL-MaLR	200	579	(0)	3567784
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
51	9.0	0.0	0.0	chr7	6885997	6886067	(152459906)	+	(AG)n	Simple_repeat	1	71	(0)	3570333
1636	19.0	1.8	1.8	chr7	6886069	6886347	(152459626)	C	AluJr	SINE/Alu	(31)	281	3	3570334
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
1133	27.5	11.7	3.6	chr7	8339413	8339913	(151006060)	+	MLT1H	LTR/ERVL-MaLR	1	547	(2)	3572380
54	0.0	0.0	0.0	chr7	8339960	8340005	(151005968)	+	(CT)n	Simple_repeat	1	46	(0)	3572381
78	2.1	4.0	1.9	chr7	12927998	12928098	(146417875)	+	(TTCCT)n	Simple_repeat	1	105	(0)	3578062
28	3.1	0.0	0.0	chr7	12928099	12928131	(146417842)	+	(TC)n	Simple_repeat	1	33	(0)	3578063
463	31.7	8.0	2.1	chr7	12942535	12942769	(146403204)	+	MIRc	SINE/MIR	7	256	(12)	3578076
62	1.8	0.0	0.0	chr7	13155962	13156018	(146189955)	+	(AG)n	Simple_repeat	1	57	(0)	3578373
181	33.9	2.7	6.8	chr7	14688084	14688200	(144657773)	+	L2c	LINE/L2	3239	3350	(37)	3580298
1378	8.7	15.9	8.0	chr7	16643737	16644000	(142701973)	+	AluJo	SINE/Alu	1	289	(23)	3582779
30	9.9	0.0	0.0	chr7	16644002	16644044	(142701929)	+	(GA)n	Simple_repeat	1	43	(0)	3582780
56	0.0	0.0	0.0	chr7	18157805	18157852	(141188121)	+	(GA)n	Simple_repeat	1	48	(0)	3584914
396	33.1	5.5	1.7	chr7	18392050	18392224	(140953749)	+	MIRb	SINE/MIR	3	184	(84)	3585249
45	9.4	0.0	0.0	chr7	18392249	18392316	(140953657)	+	(TCTC)n	Simple_repeat	1	68	(0)	3585250
33	0.0	0.0	0.0	chr7	18392317	18392352	(140953621)	+	(AC)n	Simple_repeat	1	36	(0)	3585251
63	4.5	0.0	0.0	chr7	18392378	18392447	(140953526)	+	(TAGA)n	Simple_repeat	1	70	(0)	3585252
41	19.0	0.0	0.0	chr7	20790842	20790916	(138555057)	+	A-rich	Low_complexity	1	75	(0)	3588267
18	16.4	0.0	4.4	chr7	20798115	20798159	(138547814)	+	(GCCCC)n	Simple_repeat	1	45	(0)	3588274
13	13.0	5.6	2.6	chr7	20798416	20798451	(138547522)	+	(CTC)n	Simple_repeat	1	38	(0)	3588275
11	23.7	8.5	0.0	chr7	20798600	20798658	(138547315)	+	G-rich	Low_complexity	1	64	(0)	3588276
24	14.2	0.0	0.0	chr7	20981300	20981338	(138364635)	+	(CT)n	Simple_repeat	1	39	(0)	3588557
17	22.8	4.9	3.1	chr7	20981445	20981505	(138364468)	+	(TC)n	Simple_repeat	1	64	(0)	3588558
18	33.3	3.0	4.3	chr7	20981603	20981609	(138364364)	+	(CTCT)n	Simple_repeat	1	31	(107)	3588559
28	19.9	3.7	5.4	chr7	20981610	20981717	(138364256)	+	(CTCTCC)n	Simple_repeat	1	112	(0)	3588560
57	12.9	0.0	0.0	chr7	21075665	21075757	(138270216)	+	(AGAGAG)n	Simple_repeat	1	93	(0)	3588677
685	17.9	0.0	1.7	chr7	21139853	21139971	(138206002)	+	MER5A1	DNA/hAT-Charlie	12	128	(38)	3588775
36	8.8	0.0	0.0	chr7	21139996	21140044	(138205929)	+	(TC)n	Simple_repeat	1	49	(0)	3588776
447	26.3	3.3	0.8	chr7	21246329	21246445	(138099528)	+	FLAM_C	SINE/Alu	2	211	(90)	3588917
47	2.3	0.0	0.0	chr7	21246447	21246491	(138099482)	+	(TC)n	Simple_repeat	1	45	(0)	3588918
334	28.1	2.4	8.3	chr7	21941714	21941845	(137404128)	+	MIRb	SINE/MIR	100	223	(45)	3589929
1613	18.3	5.5	0.7	chr7	22545681	22545972	(136800001)	+	LTR68	LTR/ERV1	434	740	(0)	3590823
1761	24.1	5.7	4.7	chr7	22548043	22548730	(136797243)	C	LTR106_Mam	LTR	(4)	704	9	3590827
96	6.1	1.7	0.0	chr7	22587030	22587149	(136758824)	+	(TC)n	Simple_repeat	1	122	(0)	3590888
31061	11.3	5.7	4.3	chr7	22805097	22805988	(136539985)	+	MER61-int	LTR/ERV1	2242	3038	(2179)	3591237
43	0.0	0.0	0.0	chr7	22805989	22806025	(136539948)	+	(TC)n	Simple_repeat	1	37	(0)	3591240
31061	11.3	5.7	4.3	chr7	22806026	22808138	(136537835)	+	MER61-int	LTR/ERV1	3039	5214	(3)	3591237
30	25.4	0.0	4.6	chr7	23272329	23272348	(136073625)	+	A-rich	Low_complexity	1	18	(0)	3592022
710	15.7	5.3	0.0	chr7	23272349	23272456	(136073517)	+	FLAM_A	SINE/Alu	1	114	(28)	3592023
44	11.7	0.0	0.0	chr7	23272457	23272522	(136073451)	+	(GA)n	Simple_repeat	1	66	(0)	3592024
30	25.4	0.0	4.6	chr7	23272523	23272544	(136073429)	+	A-rich	Low_complexity	19	103	(0)	3592025
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
1806	12.7	5.9	4.0	chr7	23532310	23532464	(135813509)	C	AluJb	SINE/Alu	(6)	306	143	3592524
4413	8.5	8.1	0.3	chr7	24793781	24794264	(134551709)	C	Harlequin-int	LTR/ERV1	(3753)	1349	815	3594397
37	4.3	4.2	0.0	chr7	24794265	24794312	(134551661)	+	(TC)n	Simple_repeat	1	50	(0)	3594398
4602	16.9	5.7	8.8	chr7	24794313	24795350	(134550623)	C	Harlequin-int	LTR/ERV1	(5901)	995	1	3594397
303	29.7	12.8	8.5	chr7	25167492	25167855	(134178118)	C	Tigger15a	DNA/TcMar-Tigger	(304)	411	30	3595043
75	1.5	0.0	0.0	chr7	25258886	25258953	(134087020)	+	(GT)n	Simple_repeat	1	68	(0)	3595177
61	0.0	0.0	0.0	chr7	25258958	25259009	(134086964)	+	(GA)n	Simple_repeat	1	52	(0)	3595178
251	26.5	5.8	3.9	chr7	25259163	25259264	(134086709)	+	MamRep1879	DNA/hAT-Tip100?	61	164	(52)	3595179
55	14.3	1.9	0.9	chr7	25769674	25769777	(133576196)	+	A-rich	Low_complexity	1	106	(0)	3595904
13	4.3	3.9	3.7	chr7	26061416	26061441	(133284532)	+	(AACA)n	Simple_repeat	1	27	(0)	3596344
400	33.0	1.7	1.7	chr7	26292752	26292930	(133053043)	C	MIR3	SINE/MIR	(1)	207	29	3596792
758	23.5	8.6	5.1	chr7	26435552	26436010	(132909963)	+	MLT1F1	LTR/ERVL-MaLR	28	567	(2)	3597040
1593	17.9	1.1	0.7	chr7	26469623	26469895	(132876078)	+	AluJo	SINE/Alu	2	275	(37)	3597100
88	1.3	0.0	0.0	chr7	26469899	26469977	(132875996)	+	(AG)n	Simple_repeat	1	79	(0)	3597101
55	11.9	4.2	2.4	chr7	26469978	26470075	(132875898)	+	GA-rich	Low_complexity	21	120	(0)	3597102
21	6.1	2.9	0.0	chr7	26535241	26535274	(132810699)	+	(AAAAC)n	Simple_repeat	1	35	(0)	3597203
21	15.4	0.0	0.0	chr7	26537047	26537082	(132808891)	+	GA-rich	Low_complexity	1	36	(0)	3597207
187	22.5	2.7	11.2	chr7	27098923	27099002	(132246971)	+	L3	LINE/CR1	2707	2779	(1320)	3598017
16	6.6	2.8	5.4	chr7	27103356	27103391	(132242582)	+	(TTCCTT)n	Simple_repeat	1	37	(0)	3598023
14	23.6	4.3	4.1	chr7	27103473	27103542	(132242431)	+	(CTCGCCC)n	Simple_repeat	1	73	(0)	3598024
12	15.8	2.6	5.0	chr7	27130047	27130085	(132215888)	+	(CCCGAC)n	Simple_repeat	1	40	(0)	3598045
36	0.0	0.0	0.0	chr7	27140002	27140032	(132205941)	+	(AG)n	Simple_repeat	1	31	(0)	3598050
19	0.0	0.0	0.0	chr7	27150158	27150178	(132195795)	+	(TC)n	Simple_repeat	1	21	(0)	3598062
32	19.7	6.8	0.0	chr7	27176119	27176206	(132169767)	+	GA-rich	Low_complexity	1	94	(0)	3598086
15	0.0	4.5	0.0	chr7	27180190	27180211	(132165762)	+	(CGCC)n	Simple_repeat	1	23	(0)	3598088
684	20.3	8.1	6.3	chr7	27929782	27929936	(131416037)	+	L1ME4a	LINE/L1	5909	6071	(53)	3599254
45	8.9	0.0	0.0	chr7	27929937	27929997	(131415976)	+	(TC)n	Simple_repeat	1	61	(0)	3599255
2675	7.1	0.0	0.0	chr7	27929998	27930294	(131415679)	C	AluY	SINE/Alu	(14)	297	1	3599256
33	9.4	0.0	0.0	chr7	28158141	28158186	(131187787)	+	(AC)n	Simple_repeat	1	46	(0)	3599583
40	2.6	0.0	0.0	chr7	28158187	28158225	(131187748)	+	(AG)n	Simple_repeat	1	39	(0)	3599584
630	16.3	1.0	0.0	chr7	28232834	28232931	(131113042)	+	AluJb	SINE/Alu	208	306	(6)	3599726
25	12.1	4.4	0.0	chr7	28232932	28232976	(131112997)	+	GA-rich	Low_complexity	1	47	(0)	3599727
842	23.8	3.4	0.0	chr7	28232988	28233189	(131112784)	+	MER63A	DNA/hAT-Blackjack	1	209	(1)	3599728
125	11.4	3.1	3.8	chr7	28551822	28552068	(130793905)	+	(TTTC)n	Simple_repeat	1	245	(0)	3600235
1930	12.2	1.5	1.5	chr7	28552069	28552331	(130793642)	C	AluSx1	SINE/Alu	(39)	273	11	3600236
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
17	5.0	0.0	0.0	chr7	28686474	28686523	(130659450)	+	(A)n	Simple_repeat	1	50	(0)	3600427
34	3.6	4.8	4.5	chr7	28790476	28790524	(130555449)	+	(AAGA)n	Simple_repeat	1	51	(0)	3600581
21	4.0	0.0	0.0	chr7	28855760	28855785	(130490188)	+	(CT)n	Simple_repeat	1	26	(0)	3600674
41	0.0	0.0	0.0	chr7	29195596	29195630	(130150343)	+	(GA)n	Simple_repeat	1	35	(0)	3601208
18	0.0	0.0	0.0	chr7	29195631	29195650	(130150323)	+	(TG)n	Simple_repeat	1	20	(0)	3601209
18	0.0	0.0	0.0	chr7	29195650	29195669	(130150304)	+	(GA)n	Simple_repeat	1	20	(0)	3601210
20	13.9	0.0	0.0	chr7	29675279	29675310	(129670663)	+	(CA)n	Simple_repeat	1	32	(0)	3601952
41	8.0	0.0	0.0	chr7	29675311	29675363	(129670610)	+	(CT)n	Simple_repeat	1	53	(0)	3601953
236	30.1	5.7	0.0	chr7	29854598	29854680	(129491293)	C	LTR82A	LTR/ERVL	(6)	824	737	3602234
1417	15.7	19.6	1.3	chr7	29854723	29855038	(129490935)	+	MLT1B	LTR/ERVL-MaLR	3	390	(0)	3602235
535	20.2	14.5	0.0	chr7	29965943	29966066	(129379907)	C	MLT1G1	LTR/ERVL-MaLR	(6)	589	445	3602398
56	14.5	2.0	0.0	chr7	29966077	29966175	(129379798)	+	GA-rich	Low_complexity	1	101	(0)	3602399
774	23.4	6.1	4.1	chr7	29966176	29966420	(129379553)	C	MLT1G1	LTR/ERVL-MaLR	(345)	234	4	3602398
12	32.3	2.4	3.6	chr7	30284934	30285015	(129060958)	+	(GGC)n	Simple_repeat	1	84	(0)	3602922
52	11.5	0.0	0.0	chr7	30294974	30295050	(129050923)	+	(AG)n	Simple_repeat	1	77	(0)	3602934
60	0.0	0.0	0.0	chr7	30295051	30295101	(129050872)	+	(GT)n	Simple_repeat	1	51	(0)	3602935
20	24.5	2.4	4.7	chr7	30469358	30469372	(128876601)	+	(TCCC)n	Simple_repeat	1	32	(54)	3603172
12	21.5	2.1	4.2	chr7	30469373	30469419	(128876554)	+	(CCTCTTC)n	Simple_repeat	1	48	(0)	3603173
20	24.5	2.4	4.7	chr7	30469420	30469441	(128876532)	+	(TCCC)n	Simple_repeat	33	86	(0)	3603172
92	1.1	2.2	0.0	chr7	30520838	30520927	(128825046)	+	(GA)n	Simple_repeat	1	92	(0)	3603253
16	25.3	2.9	2.8	chr7	32297857	32297925	(127048048)	+	(CTCTTTT)n	Simple_repeat	1	71	(0)	3605968
124	1.7	1.6	0.0	chr7	32297956	32298076	(127047897)	+	(TC)n	Simple_repeat	1	123	(0)	3605969
34	11.9	0.0	0.0	chr7	32738446	32738500	(126607473)	+	(GAGA)n	Simple_repeat	1	55	(0)	3606690
26	11.2	0.0	0.0	chr7	32738500	32738538	(126607435)	+	(GT)n	Simple_repeat	1	39	(0)	3606691
1716	13.9	7.3	7.8	chr7	32798313	32798463	(126547510)	+	THE1D	LTR/ERVL-MaLR	46	214	(167)	3606788
37	3.5	8.6	0.0	chr7	32798464	32798521	(126547452)	+	(CT)n	Simple_repeat	1	63	(0)	3606790
1716	13.9	7.3	7.8	chr7	32798522	32798688	(126547285)	+	THE1D	LTR/ERVL-MaLR	215	381	(0)	3606788
1099	32.9	3.7	4.0	chr7	32937731	32938354	(126407619)	+	LTR49-int	LTR/ERV1	535	1156	(6419)	3607033
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
344	30.1	6.2	2.4	chr7	33808013	33808182	(125537791)	+	Chap1_Mam	DNA/hAT-Charlie	1	177	(165)	3608419
14	15.8	4.3	4.2	chr7	33808240	33808285	(125537688)	+	(AGAGCA)n	Simple_repeat	1	48	(0)	3608420
224	28.9	2.4	6.7	chr7	33808414	33808502	(125537471)	+	L2c	LINE/L2	3280	3364	(23)	3608421
580	23.7	5.0	1.7	chr7	33935335	33935506	(125410467)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	3608606
39	10.8	0.0	0.0	chr7	33935575	33935637	(125410336)	+	(AGAG)n	Simple_repeat	1	63	(0)	3608607
48	13.1	0.0	0.0	chr7	34015971	34016045	(125329928)	+	(AG)n	Simple_repeat	1	75	(0)	3608716
17	31.3	0.0	0.0	chr7	34065153	34065203	(125280770)	+	(AC)n	Simple_repeat	1	51	(0)	3608791
66	1.7	0.0	0.0	chr7	34065204	34065264	(125280709)	+	(CT)n	Simple_repeat	1	61	(0)	3608792
2116	12.6	6.3	2.5	chr7	34216760	34216922	(125129051)	C	THE1D	LTR/ERVL-MaLR	(0)	381	211	3608982
30	3.4	0.0	0.0	chr7	34216923	34216952	(125129021)	+	(GA)n	Simple_repeat	1	30	(0)	3608983
2116	12.6	6.3	2.5	chr7	34216953	34217154	(125128819)	C	THE1D	LTR/ERVL-MaLR	(171)	210	1	3608982
70	0.0	0.0	0.0	chr7	35674405	35674464	(123671509)	+	(AG)n	Simple_repeat	1	60	(0)	3611029
3657	17.8	6.6	4.8	chr7	35674471	35675320	(123670653)	+	MER21B	LTR/ERVL	1	866	(2)	3611030
1276	18.5	2.9	0.3	chr7	35751884	35752181	(123593792)	C	L1MA4	LINE/L1	(0)	6300	5995	3611156
54	0.0	0.0	0.0	chr7	35752294	35752339	(123593634)	+	(TC)n	Simple_repeat	1	46	(0)	3611157
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
49	2.2	0.0	0.0	chr7	36219762	36219807	(123126166)	+	(AG)n	Simple_repeat	1	46	(0)	3611930
30	0.0	0.0	0.0	chr7	36219808	36219840	(123126133)	+	(TG)n	Simple_repeat	1	33	(0)	3611931
288	30.1	16.4	1.9	chr7	36292139	36292294	(123053679)	C	MIRb	SINE/MIR	(31)	237	55	3612057
314	24.7	11.8	1.0	chr7	36292341	36292438	(123053535)	C	L1MEd	LINE/L1	(4998)	2088	1979	3612058
28	21.6	0.0	0.0	chr7	36292439	36292499	(123053474)	+	(CTCT)n	Simple_repeat	1	61	(0)	3612059
2186	12.7	1.6	0.0	chr7	36292500	36292806	(123053167)	C	AluSx1	SINE/Alu	(0)	312	1	3612060
406	10.2	0.0	0.0	chr7	37182463	37182537	(122163436)	C	AluYj4	SINE/Alu	(0)	311	233	3613372
246	7.2	21.1	1.8	chr7	37182490	37182546	(122163427)	+	SVA_B	Retroposon/SVA	306	376	(1007)	3613373
29	8.7	4.0	0.0	chr7	37182556	37182605	(122163368)	+	(TC)n	Simple_repeat	1	52	(0)	3613374
279	32.3	8.7	4.8	chr7	37182661	37182867	(122163106)	+	MIRb	SINE/MIR	2	202	(60)	3613375
11658	13.9	4.7	2.7	chr7	37777379	37778137	(121567836)	C	L1MA3	LINE/L1	(1682)	5883	5118	3614250
61	0.0	0.0	0.0	chr7	37778138	37778189	(121567784)	+	(TC)n	Simple_repeat	1	52	(0)	3614254
11658	13.9	4.7	2.7	chr7	37778190	37778940	(121567033)	C	L1MA3	LINE/L1	(2448)	5117	4342	3614250
960	17.1	0.0	0.0	chr7	38145133	38145290	(121200683)	C	Tigger7	DNA/TcMar-Tigger	(0)	2491	2334	3614709
722	13.8	9.5	0.0	chr7	38145305	38145374	(121200599)	+	MER44A	DNA/TcMar-Tigger	31	101	(238)	3614710
42	0.0	0.0	0.0	chr7	38145375	38145410	(121200563)	+	(GA)n	Simple_repeat	1	36	(0)	3614711
722	13.8	9.5	0.0	chr7	38145411	38145491	(121200482)	+	MER44A	DNA/TcMar-Tigger	102	197	(142)	3614710
295	28.0	10.7	3.6	chr7	38145505	38145872	(121200101)	+	L1M5	LINE/L1	4444	4870	(1276)	3614706
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
208	33.0	4.9	0.0	chr7	38178407	38178503	(121167470)	C	MIRc	SINE/MIR	(82)	186	85	3614740
1733	22.4	7.4	2.5	chr7	38406469	38406700	(120939273)	+	MLT2B3	LTR/ERVL	1	238	(316)	3615094
65	4.1	2.6	0.0	chr7	38406701	38406776	(120939197)	+	(TC)n	Simple_repeat	1	78	(0)	3615095
1733	22.4	7.3	2.5	chr7	38406777	38407021	(120938952)	+	MLT2B3	LTR/ERVL	239	501	(60)	3615094
46	23.9	2.8	2.0	chr7	38407150	38407293	(120938680)	+	(ATCT)n	Simple_repeat	1	148	(0)	3615099
21	4.0	0.0	0.0	chr7	38407293	38407318	(120938655)	+	(AG)n	Simple_repeat	1	26	(0)	3615100
1183	21.4	4.1	18.3	chr7	38949355	38949812	(120396161)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3615870
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
62	1.8	0.0	0.0	chr7	39505425	39505481	(119840492)	+	(CT)n	Simple_repeat	1	57	(0)	3616603
13	21.8	0.0	0.0	chr7	39505483	39505515	(119840458)	+	(CCCTCT)n	Simple_repeat	1	33	(0)	3616604
48	0.0	0.0	0.0	chr7	39575538	39575578	(119770395)	+	(GA)n	Simple_repeat	1	41	(0)	3616735
2137	7.7	1.9	0.0	chr7	39976029	39976288	(119369685)	+	AluSx1	SINE/Alu	14	278	(34)	3617529
42	0.0	0.0	0.0	chr7	39976289	39976324	(119369649)	+	(TC)n	Simple_repeat	1	36	(0)	3617530
33	5.1	0.0	0.0	chr7	39976325	39976365	(119369608)	+	(AC)n	Simple_repeat	1	41	(0)	3617531
56	11.6	2.0	2.0	chr7	40370564	40370661	(118975312)	+	GA-rich	Low_complexity	1	100	(0)	3618340
287	25.9	2.9	0.7	chr7	40370664	40370799	(118975174)	+	L1ME4a	LINE/L1	5983	6121	(3)	3618341
1722	16.0	2.5	2.9	chr7	40448566	40448846	(118897127)	+	AluJb	SINE/Alu	1	280	(32)	3618470
30	14.4	3.1	0.0	chr7	40448852	40448904	(118897069)	+	(ATAC)n	Simple_repeat	1	55	(0)	3618471
39	6.8	0.0	0.0	chr7	40448905	40448951	(118897022)	+	(TG)n	Simple_repeat	1	47	(0)	3618472
30	14.4	3.1	0.0	chr7	40448952	40448961	(118897012)	+	(ATAC)n	Simple_repeat	4	13	(0)	3618473
43	2.5	0.0	0.0	chr7	40448962	40449002	(118896971)	+	(AG)n	Simple_repeat	1	41	(0)	3618474
521	19.4	2.1	0.0	chr7	40449007	40449099	(118896874)	+	MER3	DNA/hAT-Charlie	21	115	(94)	3618475
18	18.9	6.2	0.0	chr7	40449100	40449147	(118896826)	+	(TA)n	Simple_repeat	1	51	(0)	3618476
44	4.4	0.0	0.0	chr7	40470748	40470794	(118875179)	+	(TC)n	Simple_repeat	1	47	(0)	3618514
109	21.2	2.0	0.4	chr7	41700634	41700881	(117645092)	+	GA-rich	Low_complexity	1	253	(0)	3620215
46	2.3	0.0	0.0	chr7	41856997	41857040	(117488933)	+	(TC)n	Simple_repeat	1	44	(0)	3620441
2360	10.9	0.3	0.0	chr7	42155158	42155468	(117190505)	+	AluSp	SINE/Alu	1	312	(1)	3620809
2054	15.1	4.3	2.9	chr7	42202101	42202180	(117143793)	C	Tigger3a	DNA/TcMar-Tigger	(267)	81	1	3620888
26	3.3	0.0	0.0	chr7	42202316	42202346	(117143627)	+	(TC)n	Simple_repeat	1	31	(0)	3620890
53	2.0	0.0	0.0	chr7	42202347	42202396	(117143577)	+	(CA)n	Simple_repeat	1	50	(0)	3620891
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
44	2.3	0.0	0.0	chr7	42238004	42238047	(117107926)	+	(CCT)n	Simple_repeat	1	44	(0)	3620933
21	21.0	1.6	3.1	chr7	42238048	42238057	(117107916)	+	(CCCCGC)n	Simple_repeat	6	15	(0)	3620934
697	19.4	0.0	6.2	chr7	42851880	42852008	(116493965)	+	FLAM_A	SINE/Alu	1	121	(21)	3621768
60	0.0	0.0	0.0	chr7	42852011	42852061	(116493912)	+	(GA)n	Simple_repeat	1	51	(0)	3621769
1141	8.0	0.7	0.0	chr7	42857434	42857600	(116488373)	+	AluSx3	SINE/Alu	174	311	(0)	3621775
899	17.6	26.8	0.3	chr7	42887678	42887994	(116457979)	+	MER54B	LTR/ERVL	1	404	(497)	3621806
43	0.0	0.0	0.0	chr7	42887995	42888031	(116457942)	+	(TC)n	Simple_repeat	1	37	(0)	3621807
52	0.0	2.1	0.0	chr7	42888046	42888093	(116457880)	+	(GT)n	Simple_repeat	1	49	(0)	3621808
374	16.3	5.2	1.1	chr7	42889328	42889420	(116456553)	+	MER107	DNA/hAT-Charlie	68	164	(36)	3621810
45	8.3	0.0	0.0	chr7	42889422	42889486	(116456487)	+	(AGAG)n	Simple_repeat	1	65	(0)	3621811
12	29.2	0.0	3.7	chr7	42911707	42911760	(116434213)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3621832
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
212	20.0	3.2	2.0	chr7	43335675	43336198	(116009775)	+	(TCTT)n	Simple_repeat	1	541	(0)	3622487
1625	16.4	3.7	2.2	chr7	43336199	43336467	(116009506)	C	AluJr	SINE/Alu	(39)	273	1	3622488
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
23	0.0	0.0	3.5	chr7	43625749	43625777	(115720196)	+	(AG)n	Simple_repeat	1	29	(0)	3622897
1555	16.3	2.5	7.3	chr7	43644762	43644791	(115701182)	C	AluJo	SINE/Alu	(182)	130	113	3622918
45	2.4	0.0	0.0	chr7	43644792	43644834	(115701139)	+	(AG)n	Simple_repeat	1	43	(0)	3622920
1555	16.3	2.5	7.3	chr7	43644835	43644918	(115701055)	C	AluJo	SINE/Alu	(200)	112	29	3622918
33	0.0	0.0	0.0	chr7	43664104	43664131	(115681842)	+	(AG)n	Simple_repeat	1	28	(0)	3622959
791	19.9	0.0	7.8	chr7	43664132	43664297	(115681676)	C	AluJo	SINE/Alu	(39)	273	121	3622960
12522	9.1	2.5	1.4	chr7	43810660	43812640	(115533333)	+	HERVIP10F-int	LTR/ERV1	1	1914	(5823)	3623225
2725	8.2	6.0	1.0	chr7	43812642	43813049	(115532924)	+	HERVIP10FH-int	LTR/ERV1	835	1264	(3838)	3623226
321	6.5	2.1	0.0	chr7	43825613	43825658	(115520315)	+	LTR3A	LTR/ERVK	434	480	(4)	3623230
35	0.0	0.0	0.0	chr7	43825769	43825798	(115520175)	+	(TC)n	Simple_repeat	1	30	(0)	3623231
246	23.9	7.1	1.1	chr7	44094613	44094705	(115251268)	+	MamGypLTR1c	LTR/Gypsy	697	795	(8)	3623802
1224	24.5	6.3	6.8	chr7	44094755	44094833	(115251140)	+	L1MC5	LINE/L1	8759	8840	(464)	3623803
35	0.0	0.0	0.0	chr7	44094834	44094863	(115251110)	+	(GA)n	Simple_repeat	1	30	(0)	3623804
1224	24.5	6.3	6.8	chr7	44094864	44095323	(115250650)	+	L1MC5	LINE/L1	8841	9294	(10)	3623803
2333	10.4	0.0	0.3	chr7	44332230	44332520	(115013453)	+	AluSq2	SINE/Alu	1	291	(22)	3624075
33	3.1	0.0	0.0	chr7	44332521	44332553	(115013420)	+	(AG)n	Simple_repeat	1	33	(0)	3624076
2333	10.4	0.0	0.3	chr7	44332554	44332569	(115013404)	+	AluSq2	SINE/Alu	292	307	(6)	3624075
2252	12.0	1.3	0.3	chr7	44332606	44332914	(115013059)	+	AluSx1	SINE/Alu	1	312	(0)	3624077
31	18.7	4.1	3.9	chr7	44847977	44848074	(114497899)	+	(CGC)n	Simple_repeat	1	102	(0)	3625016
49	4.8	1.6	0.0	chr7	45230737	45230800	(114115173)	+	(AG)n	Simple_repeat	1	65	(0)	3625684
3151	20.2	1.5	3.2	chr7	45282825	45283362	(114062611)	C	L1MC3	LINE/L1	(201)	7584	7047	3625765
806	18.8	13.7	0.0	chr7	45283363	45283401	(114062572)	C	MLT2B2	LTR/ERVL	(0)	567	529	3625767
60	0.0	1.8	0.0	chr7	45283402	45283456	(114062517)	+	(GA)n	Simple_repeat	1	56	(0)	3625768
1996	18.4	1.8	1.5	chr7	45283457	45283844	(114062129)	C	MLT2B2	LTR/ERVL	(39)	528	16	3625767
43	28.4	3.6	0.0	chr7	47259776	47259915	(112086058)	+	(TCTC)n	Simple_repeat	1	145	(0)	3628306
233	17.2	0.0	12.1	chr7	47259920	47260018	(112085955)	+	SVA_A	Retroposon/SVA	1	87	(1300)	3628307
256	16.3	9.6	0.0	chr7	47259969	47260023	(112085950)	C	AluY	SINE/Alu	(5)	296	249	3628308
61	0.0	0.0	0.0	chr7	47316095	47316146	(112029827)	+	(TC)n	Simple_repeat	1	52	(0)	3628376
71	32.9	4.9	0.5	chr7	47589919	47590132	(111755841)	+	(CTCT)n	Simple_repeat	1	226	(0)	3628719
30	2.8	5.4	0.0	chr7	47590133	47590169	(111755804)	+	(TC)n	Simple_repeat	1	39	(0)	3628720
71	32.9	4.9	0.5	chr7	47590170	47590324	(111755649)	+	(CTCT)n	Simple_repeat	3	161	(0)	3628721
22152	9.4	3.5	0.8	chr7	48121938	48126218	(111219755)	C	L1PB1	LINE/L1	(371)	6496	1800	3629516
69	17.9	2.8	0.0	chr7	48126220	48126381	(111219592)	+	(CTCT)n	Simple_repeat	1	166	(0)	3629518
1699	15.8	0.0	0.0	chr7	48126385	48126618	(111219355)	C	AluSz6	SINE/Alu	(39)	273	40	3629519
2094	13.4	0.0	0.4	chr7	51177863	51178138	(108167835)	+	AluSq2	SINE/Alu	1	275	(38)	3633299
31	7.9	0.0	0.0	chr7	51178142	51178181	(108167792)	+	(CT)n	Simple_repeat	1	40	(0)	3633300
6066	22.0	8.3	7.8	chr7	51178182	51178625	(108167348)	+	LTR49-int	LTR/ERV1	4164	4467	(3653)	3633295
184	27.5	2.8	2.8	chr7	51606761	51606831	(107739142)	C	MIR	SINE/MIR	(115)	147	77	3633883
265	25.2	6.2	16.1	chr7	51606842	51607021	(107738952)	C	MIR	SINE/MIR	(29)	233	73	3633884
599	27.4	9.4	0.0	chr7	51643456	51643667	(107702306)	+	MLT1G1	LTR/ERVL-MaLR	1	234	(345)	3633936
81	17.8	7.4	0.8	chr7	51643668	51643898	(107702075)	+	(CTGTCT)n	Simple_repeat	1	248	(0)	3633937
173	25.5	1.9	0.8	chr7	54722465	54722936	(104623037)	+	(TC)n	Simple_repeat	1	481	(0)	3637710
43	11.5	2.7	0.0	chr7	55564225	55564299	(103781674)	+	(CTCT)n	Simple_repeat	1	77	(0)	3638817
2246	13.6	0.3	1.3	chr7	64245016	64245325	(95100648)	C	AluSx1	SINE/Alu	(5)	307	1	3646052
3710	19.2	5.8	1.8	chr7	64245335	64245410	(95100563)	C	MER41-int	LTR/ERV1	(5240)	706	610	3646049
59	4.9	0.0	0.0	chr7	64245411	64245474	(95100499)	+	(GA)n	Simple_repeat	1	64	(0)	3646053
3710	19.2	5.8	1.8	chr7	64245475	64245724	(95100249)	C	MER41-int	LTR/ERV1	(5337)	609	358	3646049
2239	11.9	0.0	0.0	chr7	65738920	65739214	(93606759)	C	AluSg	SINE/Alu	(15)	295	1	3648347
51	0.0	0.0	0.0	chr7	65739232	65739275	(93606698)	+	(GA)n	Simple_repeat	1	44	(0)	3648348
1854	13.4	1.4	0.4	chr7	65739283	65739559	(93606414)	+	AluSz6	SINE/Alu	17	296	(16)	3648349
2004	12.9	0.7	0.0	chr7	66328544	66328822	(93017151)	C	AluSz6	SINE/Alu	(9)	303	23	3649756
54	6.5	0.0	0.0	chr7	66328824	66328887	(93017086)	+	(CT)n	Simple_repeat	1	64	(0)	3649757
17	0.0	0.0	0.0	chr7	66328888	66328906	(93017067)	+	(AT)n	Simple_repeat	1	19	(0)	3649758
1929	10.5	0.0	11.1	chr7	66705119	66705443	(92640530)	+	AluSz	SINE/Alu	1	289	(23)	3650633
51	0.0	0.0	0.0	chr7	66705444	66705487	(92640486)	+	(AG)n	Simple_repeat	1	44	(0)	3650634
23	14.1	4.2	0.0	chr7	66705488	66705535	(92640438)	+	GA-rich	Low_complexity	1	50	(0)	3650635
313	20.3	1.7	0.0	chr7	66705543	66705601	(92640372)	C	L1MC	LINE/L1	(1812)	4334	4275	3650632
243	33.8	5.2	7.8	chr7	66732858	66733114	(92612859)	+	L2	LINE/L2	2702	2951	(468)	3650692
26	24.7	0.0	0.0	chr7	66736906	66736964	(92609009)	+	(AC)n	Simple_repeat	1	59	(0)	3650702
66	4.4	0.0	0.0	chr7	66737052	66737121	(92608852)	+	(GA)n	Simple_repeat	1	70	(0)	3650703
571	17.0	0.0	2.1	chr7	66737122	66737207	(92608766)	C	AluJr	SINE/Alu	(205)	107	23	3650704
915	15.2	0.6	10.5	chr7	66737229	66737419	(92608554)	C	AluJr	SINE/Alu	(6)	306	135	3650705
1006	23.2	1.8	2.6	chr7	67374624	67374853	(91971120)	+	MLT1D	LTR/ERVL-MaLR	1	228	(277)	3652073
137	17.4	1.8	1.1	chr7	67374875	67375148	(91970825)	+	GA-rich	Low_complexity	1	279	(0)	3652074
565	20.8	3.8	10.1	chr7	67375150	67375347	(91970626)	+	MLT1D	LTR/ERVL-MaLR	182	366	(139)	3652073
58	4.2	1.4	0.0	chr7	67438591	67438663	(91907310)	+	(GA)n	Simple_repeat	1	74	(0)	3652235
394	30.8	2.7	1.4	chr7	69055603	69055750	(90290223)	+	L2a	LINE/L2	2741	2890	(529)	3655825
60	1.8	0.0	0.0	chr7	69055776	69055831	(90290142)	+	(TC)n	Simple_repeat	1	56	(0)	3655826
215	27.2	1.7	0.8	chr7	69134434	69135024	(90210949)	+	(CT)n	Simple_repeat	1	601	(0)	3655990
2298	11.5	0.0	1.0	chr7	69233552	69233899	(90112074)	C	AluSx1	SINE/Alu	(0)	312	1	3656199
2271	16.5	6.3	3.4	chr7	69533632	69533836	(89812137)	+	MSTB	LTR/ERVL-MaLR	1	228	(198)	3656910
53	0.0	0.0	0.0	chr7	69533837	69533881	(89812092)	+	(CT)n	Simple_repeat	1	45	(0)	3656911
2271	16.5	6.3	3.4	chr7	69533882	69534018	(89811955)	+	MSTB	LTR/ERVL-MaLR	229	364	(62)	3656910
31	2.2	4.0	3.9	chr7	69598310	69598359	(89747614)	+	(CGAG)n	Simple_repeat	1	52	(0)	3657061
11	11.2	6.9	0.0	chr7	69908060	69908088	(89437885)	+	(AATATA)n	Simple_repeat	1	31	(0)	3657556
185	17.4	11.5	2.1	chr7	70098346	70098392	(89247581)	C	L3	LINE/CR1	(2343)	1756	1705	3657850
224	28.6	4.9	0.1	chr7	70887723	70888512	(88457461)	+	GA-rich	Low_complexity	1	829	(0)	3659020
63	9.9	5.8	0.8	chr7	71798019	71798139	(87547834)	+	(GACAGA)n	Simple_repeat	1	128	(0)	3660954
285	27.2	11.7	2.5	chr7	71798140	71798301	(87547672)	+	MLT1K	LTR/ERVL-MaLR	400	578	(17)	3660955
1525	16.6	5.3	1.9	chr7	71798308	71798604	(87547369)	C	AluJo	SINE/Alu	(0)	312	2	3660956
2436	7.8	0.7	0.0	chr7	72894296	72894591	(86451382)	+	AluSq2	SINE/Alu	1	298	(15)	3663302
88	0.0	1.2	1.2	chr7	72894600	72894682	(86451291)	+	(AG)n	Simple_repeat	1	84	(0)	3663303
810	13.4	1.4	3.5	chr7	72894690	72894831	(86451142)	C	AluJo	SINE/Alu	(44)	268	130	3663304
1996	12.5	2.9	0.3	chr7	73123455	73123757	(86222216)	C	AluSz	SINE/Alu	(1)	311	1	3663866
69	1.6	0.0	0.0	chr7	73123766	73123828	(86222145)	+	(TC)n	Simple_repeat	1	63	(0)	3663867
981	16.2	10.6	9.9	chr7	73123829	73124081	(86221892)	C	AluJb	SINE/Alu	(56)	256	2	3663868
259	13.1	0.0	0.0	chr7	73156078	73156138	(86189835)	C	PRIMA4-int	LTR/ERV1	(7689)	581	521	3663989
79	3.8	0.0	0.0	chr7	73156139	73156219	(86189754)	+	(CT)n	Simple_repeat	1	81	(0)	3663990
47	46.4	1.4	2.8	chr7	73762636	73763027	(85582946)	+	(CCCT)n	Simple_repeat	1	386	(0)	3665409
2394	9.2	0.7	0.0	chr7	73763028	73763332	(85582641)	C	AluSq2	SINE/Alu	(5)	308	2	3665410
250	22.9	3.5	6.7	chr7	73872655	73872743	(85473230)	+	L3	LINE/CR1	3949	4034	(65)	3665678
92	20.3	2.4	3.9	chr7	73872744	73872996	(85472977)	+	(CCTT)n	Simple_repeat	1	259	(0)	3665679
53	9.4	0.0	0.0	chr7	73971569	73971647	(85374326)	+	(CTCTCT)n	Simple_repeat	1	79	(0)	3665904
2364	9.8	0.3	0.0	chr7	74079564	74079869	(85266104)	+	AluSx1	SINE/Alu	1	307	(5)	3666135
86	29.7	3.2	0.3	chr7	74371508	74371787	(84974186)	+	GA-rich	Low_complexity	1	289	(0)	3666909
50	0.0	0.0	0.0	chr7	74643845	74643887	(84702086)	+	(AG)n	Simple_repeat	1	43	(0)	3667653
431	11.7	0.0	0.0	chr7	74643960	74644019	(84701954)	+	AluSz6	SINE/Alu	243	302	(10)	3667654
586	9.6	9.9	13.9	chr7	74650770	74650927	(84695046)	+	Tigger7	DNA/TcMar-Tigger	2206	2356	(135)	3667677
527	18.1	0.0	0.0	chr7	74650924	74651006	(84694967)	+	MER44C	DNA/TcMar-Tigger	651	733	(0)	3667678
881	12.3	1.9	1.3	chr7	74651028	74651183	(84694790)	C	L1PREC2	LINE/L1	(0)	6160	6004	3667679
12	27.8	3.1	3.0	chr7	75073438	75073501	(84272472)	+	G-rich	Low_complexity	1	66	(0)	3668724
23	14.7	5.3	5.1	chr7	75073665	75073739	(84272234)	+	(GCCCCA)n	Simple_repeat	1	79	(0)	3668725
1937	14.6	1.4	0.3	chr7	75715108	75715395	(83630578)	+	AluJo	SINE/Alu	1	291	(21)	3670315
21	19.7	0.0	2.0	chr7	75715402	75715451	(83630522)	+	A-rich	Low_complexity	1	50	(0)	3670316
34	0.0	0.0	0.0	chr7	75715459	75715487	(83630486)	+	(AG)n	Simple_repeat	1	29	(0)	3670317
2357	10.7	0.0	1.0	chr7	75715490	75715799	(83630174)	+	AluSx1	SINE/Alu	1	307	(5)	3670318
2260	9.6	0.0	0.0	chr7	75743054	75743335	(83602638)	C	AluSx1	SINE/Alu	(30)	282	1	3670405
63	6.2	1.1	2.2	chr7	75743339	75743427	(83602546)	+	(TC)n	Simple_repeat	1	90	(0)	3670406
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
224	24.2	4.4	1.0	chr7	76280745	76281432	(83064541)	+	(CT)n	Simple_repeat	1	718	(0)	3671774
1950	12.7	3.9	2.6	chr7	76289731	76289996	(83055977)	+	AluSq4	SINE/Alu	1	277	(34)	3671791
46	0.0	2.3	0.0	chr7	76289997	76290039	(83055934)	+	(TC)n	Simple_repeat	1	44	(0)	3671792
1950	12.7	3.9	2.6	chr7	76290040	76290080	(83055893)	+	AluSq4	SINE/Alu	278	311	(0)	3671791
23	27.0	3.6	0.0	chr7	76358916	76359003	(82986970)	+	(GCGGCT)n	Simple_repeat	1	91	(0)	3671939
13	20.1	2.0	5.8	chr7	76359060	76359110	(82986863)	+	(CCCG)n	Simple_repeat	1	52	(0)	3671940
431	27.7	10.1	5.8	chr7	76419203	76419607	(82926366)	C	L1M5	LINE/L1	(1017)	5129	4686	3672110
56	26.1	3.5	0.6	chr7	76419608	76419745	(82926228)	+	(TCTCTC)n	Simple_repeat	1	142	(0)	3672111
2370	8.1	0.3	2.8	chr7	76419746	76419764	(82926209)	C	AluSz	SINE/Alu	(0)	312	297	3672112
49	0.0	0.0	0.0	chr7	76423027	76423083	(82922890)	+	(GAAA)n	Simple_repeat	1	57	(0)	3672130
627	13.4	0.0	0.0	chr7	76423084	76423180	(82922793)	C	LTR35A	LTR/ERV1	(34)	513	417	3672127
30	12.3	0.0	0.0	chr7	76423181	76423226	(82922747)	+	(GA)n	Simple_repeat	1	46	(0)	3672131
2528	14.5	2.0	5.0	chr7	76423227	76423639	(82922334)	C	LTR35A	LTR/ERV1	(97)	450	51	3672127
80	1.4	0.0	0.0	chr7	76580348	76580420	(82765553)	+	(AG)n	Simple_repeat	1	73	(0)	3672446
1455	17.9	0.0	1.3	chr7	77625243	77625471	(81720502)	C	AluJb	SINE/Alu	(4)	308	83	3674134
79	6.7	0.0	0.0	chr7	77625473	77625566	(81720407)	+	(CT)n	Simple_repeat	1	94	(0)	3674135
1231	21.7	9.4	0.3	chr7	77791729	77792038	(81553935)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	3674504
47	12.0	1.4	0.0	chr7	77932549	77932622	(81413351)	+	(GA)n	Simple_repeat	1	75	(0)	3674737
33	0.0	0.0	0.0	chr7	77932622	77932657	(81413316)	+	(GT)n	Simple_repeat	1	36	(0)	3674738
47	6.5	1.6	0.0	chr7	78069503	78069566	(81276407)	+	(GA)n	Simple_repeat	1	65	(0)	3674958
32	9.7	1.7	1.7	chr7	78771117	78771174	(80574799)	+	(TC)n	Simple_repeat	1	59	(0)	3675902
1079	22.9	13.8	2.1	chr7	79493465	79493612	(79852361)	+	MLT1A	LTR/ERVL-MaLR	5	188	(186)	3676847
60	4.7	5.5	1.0	chr7	79493613	79493703	(79852270)	+	(TC)n	Simple_repeat	1	96	(0)	3676848
1079	22.9	13.8	2.1	chr7	79493704	79493880	(79852093)	+	MLT1A	LTR/ERVL-MaLR	189	374	(0)	3676847
53	14.8	1.0	0.0	chr7	79706656	79706752	(79639221)	+	(TCTCTC)n	Simple_repeat	1	98	(0)	3677159
325	36.8	2.1	4.6	chr7	79706795	79706988	(79638985)	C	L3	LINE/CR1	(14)	4085	3897	3677160
957	23.1	8.3	3.0	chr7	80413616	80413772	(78932201)	+	MLT1B	LTR/ERVL-MaLR	4	172	(218)	3678151
50	5.6	0.0	0.0	chr7	80413773	80413828	(78932145)	+	(TC)n	Simple_repeat	1	56	(0)	3678152
957	23.1	8.3	3.0	chr7	80413829	80414036	(78931937)	+	MLT1B	LTR/ERVL-MaLR	173	390	(0)	3678151
17	0.0	0.0	0.0	chr7	80705266	80705284	(78640689)	+	(GA)n	Simple_repeat	1	19	(0)	3678527
32	23.2	0.0	3.5	chr7	80705318	80705403	(78640570)	+	GA-rich	Low_complexity	1	86	(0)	3678528
40	0.0	0.0	0.0	chr7	80705406	80705439	(78640534)	+	(GT)n	Simple_repeat	1	34	(0)	3678529
241	21.9	1.5	1.5	chr7	80772641	80772705	(78573268)	+	MER103C	DNA/hAT-Charlie	68	132	(165)	3678608
50	28.0	2.5	1.2	chr7	80905193	80905354	(78440619)	+	GA-rich	Low_complexity	1	166	(0)	3678786
14	18.9	2.8	0.0	chr7	80905435	80905470	(78440503)	+	(AGTC)n	Simple_repeat	1	37	(0)	3678787
246	40.5	8.5	2.7	chr7	81639229	81639601	(77706372)	C	L2c	LINE/L2	(10)	3365	2984	3679777
44	0.0	0.0	0.0	chr7	81639602	81639639	(77706334)	+	(GA)n	Simple_repeat	1	38	(0)	3679778
246	40.3	8.9	2.6	chr7	81639640	81639689	(77706284)	C	L2c	LINE/L2	(404)	2983	2937	3679777
192	37.7	8.7	6.4	chr7	81639728	81640209	(77705764)	C	L2c	LINE/L2	(587)	2832	2339	3679777
360	27.3	8.5	11.6	chr7	82156219	82156425	(77189548)	+	Tigger19b	DNA/TcMar-Tigger	53	252	(298)	3680488
1512	24.3	2.2	0.8	chr7	82384191	82384551	(76961422)	+	MLT1A	LTR/ERVL-MaLR	1	366	(8)	3680811
51	8.0	0.0	0.0	chr7	83360993	83361058	(75984915)	+	(TC)n	Simple_repeat	1	66	(0)	3682163
1522	18.6	8.8	0.9	chr7	83361059	83361211	(75984762)	C	MLT1A	LTR/ERVL-MaLR	(175)	199	22	3682162
696	25.6	5.0	2.9	chr7	83536857	83537250	(75808723)	+	MLT1A	LTR/ERVL-MaLR	1	354	(54)	3682398
48	6.6	0.0	0.0	chr7	83593222	83593284	(75752689)	+	(CT)n	Simple_repeat	1	63	(0)	3682467
51	0.0	0.0	3.6	chr7	83924759	83924813	(75421160)	+	(ATAA)n	Simple_repeat	1	55	(0)	3682941
2439	6.9	0.0	3.3	chr7	83924814	83924827	(75421146)	+	AluY	SINE/Alu	283	296	(15)	3682940
628	23.3	0.7	4.1	chr7	83924839	83924984	(75420989)	+	AluJo	SINE/Alu	137	277	(35)	3682942
38	8.3	0.0	0.0	chr7	83924992	83925042	(75420931)	+	(TC)n	Simple_repeat	1	51	(0)	3682943
29	20.5	3.4	2.2	chr7	83925072	83925159	(75420814)	+	A-rich	Low_complexity	1	91	(0)	3682944
52	2.1	0.0	0.0	chr7	84195005	84195053	(75150920)	+	(AG)n	Simple_repeat	1	49	(0)	3683242
40	4.8	0.0	0.0	chr7	84196354	84196396	(75149577)	+	(TC)n	Simple_repeat	1	43	(0)	3683245
1223	30.7	10.5	5.5	chr7	84743042	84743408	(74602565)	C	L1MEc	LINE/L1	(4829)	1571	1212	3683919
1784	17.1	4.5	0.3	chr7	84743409	84743424	(74602549)	C	AluSx1	SINE/Alu	(1)	311	296	3683921
42	0.0	4.7	0.0	chr7	84743425	84743467	(74602506)	+	(TC)n	Simple_repeat	1	45	(0)	3683922
1784	17.1	4.5	0.3	chr7	84743468	84743748	(74602225)	C	AluSx1	SINE/Alu	(18)	294	1	3683921
87	28.5	1.5	1.8	chr7	85090987	85091254	(74254719)	+	A-rich	Low_complexity	1	272	(0)	3684351
37	4.8	0.0	0.0	chr7	86905012	86905054	(72440919)	+	(TGAA)n	Simple_repeat	1	43	(0)	3686524
60	13.4	4.2	0.0	chr7	86905055	86905070	(72440903)	+	GA-rich	Low_complexity	1	16	(0)	3686525
66	0.0	0.0	0.0	chr7	86905071	86905129	(72440844)	+	(GAAG)n	Simple_repeat	1	59	(0)	3686526
60	13.4	4.2	0.0	chr7	86905130	86905231	(72440742)	+	GA-rich	Low_complexity	17	123	(0)	3686527
962	16.9	0.5	2.6	chr7	87209139	87209332	(72136641)	C	THE1D	LTR/ERVL-MaLR	(8)	373	184	3686923
38	28.3	2.5	0.0	chr7	87209337	87209455	(72136518)	+	GA-rich	Low_complexity	1	122	(0)	3686924
257	19.5	7.0	1.5	chr7	87209457	87209659	(72136314)	+	HERVIP10FH-int	LTR/ERV1	784	998	(4104)	3686925
1679	17.8	0.7	1.1	chr7	87589504	87589778	(71756195)	+	AluJb	SINE/Alu	2	275	(37)	3687407
71	12.5	1.6	2.3	chr7	87589786	87589913	(71756060)	+	GA-rich	Low_complexity	1	130	(0)	3687408
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
860	17.6	4.1	0.0	chr7	89551860	89552001	(69793972)	+	FAM	SINE/Alu	10	157	(28)	3689948
51	0.0	0.0	0.0	chr7	89552011	89552054	(69793919)	+	(GA)n	Simple_repeat	1	44	(0)	3689949
1302	20.8	1.4	14.3	chr7	90077667	90077853	(69268120)	+	MLT1A	LTR/ERVL-MaLR	4	172	(202)	3690582
50	2.2	0.0	0.0	chr7	90077854	90077900	(69268073)	+	(CT)n	Simple_repeat	1	47	(0)	3690583
1302	20.8	1.4	14.3	chr7	90077901	90078139	(69267834)	+	MLT1A	LTR/ERVL-MaLR	173	374	(0)	3690582
548	20.8	0.0	0.0	chr7	90250070	90250177	(69095796)	+	FLAM_C	SINE/Alu	21	221	(81)	3690819
59	0.0	1.9	0.0	chr7	90250182	90250235	(69095738)	+	(AG)n	Simple_repeat	1	55	(0)	3690820
285	29.1	14.9	2.6	chr7	90250280	90250431	(69095542)	+	MIRb	SINE/MIR	25	198	(70)	3690821
46	0.0	0.0	0.0	chr7	90659838	90659876	(68686097)	+	(TC)n	Simple_repeat	1	39	(0)	3691454
23	0.0	0.0	0.0	chr7	90659877	90659901	(68686072)	+	(GT)n	Simple_repeat	1	25	(0)	3691455
271	21.3	15.5	7.9	chr7	90659945	90660133	(68685840)	+	MamRep434	DNA/TcMar-Tigger	1	206	(220)	3691456
539	33.8	10.8	1.7	chr7	90706431	90706782	(68639191)	C	L2b	LINE/L2	(19)	3356	2969	3691524
300	31.9	1.6	4.0	chr7	90816811	90816934	(68529039)	C	MIR3	SINE/MIR	(1)	207	87	3691656
211	35.8	0.0	0.0	chr7	91103647	91103713	(68242260)	C	MIR3	SINE/MIR	(21)	187	121	3692025
45	2.4	0.0	0.0	chr7	91103826	91103868	(68242105)	+	(GA)n	Simple_repeat	1	43	(0)	3692026
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
12	5.5	0.0	0.0	chr7	91264708	91264726	(68081247)	+	(GCG)n	Simple_repeat	1	19	(0)	3692228
49	4.1	0.0	0.0	chr7	91620758	91620808	(67725165)	+	(CT)n	Simple_repeat	1	51	(0)	3692677
30	0.0	0.0	0.0	chr7	91620809	91620841	(67725132)	+	(AC)n	Simple_repeat	1	33	(0)	3692678
43	5.5	1.8	0.0	chr7	91620841	91620897	(67725076)	+	(AG)n	Simple_repeat	1	58	(0)	3692679
537	31.8	7.9	3.1	chr7	91620924	91621473	(67724500)	+	L2c	LINE/L2	2798	3387	(0)	3692680
31	7.5	0.0	0.0	chr7	93249294	93249335	(66096638)	+	(GA)n	Simple_repeat	1	42	(0)	3695014
367	36.1	10.6	5.3	chr7	93568309	93568509	(65777464)	+	L2c	LINE/L2	1878	2115	(1304)	3695419
60	1.8	0.0	0.0	chr7	93568510	93568565	(65777408)	+	(TC)n	Simple_repeat	1	56	(0)	3695420
367	36.1	10.6	5.3	chr7	93568566	93569353	(65776620)	+	L2c	LINE/L2	2116	2925	(494)	3695419
39	6.3	0.0	0.0	chr7	93597333	93597382	(65748591)	+	(AC)n	Simple_repeat	1	50	(0)	3695460
73	1.5	0.0	0.0	chr7	93597383	93597449	(65748524)	+	(AG)n	Simple_repeat	1	67	(0)	3695461
332	31.2	8.9	5.7	chr7	93597455	93597682	(65748291)	C	L2c	LINE/L2	(891)	2528	2293	3695459
64	35.0	1.3	2.9	chr7	93717554	93717855	(65628118)	+	GA-rich	Low_complexity	1	306	(0)	3695630
260	28.8	2.7	0.0	chr7	93717918	93717990	(65627983)	C	MER63A	DNA/hAT-Blackjack	(135)	75	1	3695631
53	10.9	10.9	1.8	chr7	93830594	93830740	(65515233)	+	GA-rich	Low_complexity	1	163	(0)	3695774
848	19.5	3.5	0.6	chr7	94381483	94381647	(64964326)	+	MLT1A	LTR/ERVL-MaLR	5	174	(200)	3696551
44	6.3	0.0	0.0	chr7	94381649	94381699	(64964274)	+	(TC)n	Simple_repeat	1	51	(0)	3696552
2168	12.8	0.0	0.0	chr7	95339161	95339448	(64006525)	+	AluSx	SINE/Alu	6	293	(19)	3697820
62	0.0	0.0	0.0	chr7	95339449	95339501	(64006472)	+	(AG)n	Simple_repeat	1	53	(0)	3697821
1397	29.5	16.8	4.8	chr7	95339502	95340419	(64005554)	+	MLT1J-int	LTR/ERVL-MaLR	318	1380	(7)	3697819
12	8.8	10.5	2.4	chr7	95772508	95772545	(63573428)	+	G-rich	Low_complexity	1	42	(0)	3698469
15	29.2	2.9	1.4	chr7	95772666	95772733	(63573240)	+	(CCG)n	Simple_repeat	1	70	(0)	3698470
49	2.2	0.0	0.0	chr7	96064211	96064256	(63281717)	+	(TC)n	Simple_repeat	1	46	(0)	3698841
20	4.2	0.0	0.0	chr7	96079768	96079792	(63266181)	+	(AG)n	Simple_repeat	1	25	(0)	3698859
1322	19.4	12.7	3.5	chr7	96128898	96128939	(63217034)	+	MLT1F	LTR/ERVL-MaLR	141	188	(360)	3698906
50	0.0	0.0	0.0	chr7	96128940	96128982	(63216991)	+	(CT)n	Simple_repeat	1	43	(0)	3698907
1322	19.4	12.7	3.5	chr7	96128983	96129308	(63216665)	+	MLT1F	LTR/ERVL-MaLR	189	548	(0)	3698906
197	31.3	6.1	2.4	chr7	96855460	96855562	(62490411)	+	MIR	SINE/MIR	86	201	(7)	3699941
46	15.8	5.0	0.9	chr7	97019049	97019149	(62326824)	+	GA-rich	Low_complexity	1	106	(0)	3700167
25	0.0	0.0	0.0	chr7	97653868	97653895	(61692078)	+	(AC)n	Simple_repeat	1	28	(0)	3701105
57	0.0	0.0	0.0	chr7	97653896	97653944	(61692029)	+	(AG)n	Simple_repeat	1	49	(0)	3701106
56	10.2	0.0	0.0	chr7	97734434	97734517	(61611456)	+	(TC)n	Simple_repeat	1	84	(0)	3701216
1018	13.9	2.6	0.0	chr7	97972853	97973003	(61372970)	C	AluJr	SINE/Alu	(26)	286	132	3701568
24	0.0	0.0	0.0	chr7	97973007	97973033	(61372940)	+	(AT)n	Simple_repeat	1	27	(0)	3701569
34	4.9	0.0	0.0	chr7	97973033	97973074	(61372899)	+	(AG)n	Simple_repeat	1	42	(0)	3701570
458	18.3	1.5	2.4	chr7	97973075	97973175	(61372798)	C	FLAM_C	SINE/Alu	(15)	118	49	3701571
2549	12.2	6.4	7.6	chr7	97973176	97973663	(61372310)	C	MER51E	LTR/ERV1	(0)	482	1	3701572
29	0.0	0.0	0.0	chr7	97982966	97982990	(61362983)	+	(TC)n	Simple_repeat	1	25	(0)	3701593
16	0.0	0.0	0.0	chr7	97982991	97983005	(61362968)	+	(T)n	Simple_repeat	1	15	(0)	3701594
1854	11.6	2.3	0.0	chr7	97983077	97983335	(61362638)	+	AluSx1	SINE/Alu	37	301	(11)	3701595
191	35.7	1.0	2.0	chr7	99125417	99125516	(60220457)	C	L3	LINE/CR1	(27)	4072	3974	3704008
295	26.9	1.3	0.0	chr7	99125665	99125742	(60220231)	C	MIR	SINE/MIR	(177)	85	7	3704009
1775	16.2	1.8	0.4	chr7	99180220	99180497	(60165476)	+	AluJo	SINE/Alu	1	282	(30)	3704131
318	25.4	0.1	0.0	chr7	99180498	99181248	(60164725)	+	(CT)n	Simple_repeat	1	751	(0)	3704132
257	31.2	11.1	4.5	chr7	99181302	99181435	(60164538)	+	L2a	LINE/L2	3248	3391	(35)	3704133
134	25.4	1.6	1.6	chr7	99276757	99277138	(60068835)	+	GA-rich	Low_complexity	1	388	(0)	3704357
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
389	32.2	6.0	8.7	chr7	99979752	99980248	(59365725)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	80	3705592
611	19.2	2.4	6.2	chr7	100045130	100045259	(59300714)	+	AluJo	SINE/Alu	3	127	(185)	3705746
27	6.1	0.0	0.0	chr7	100478316	100478350	(58867623)	+	(AG)n	Simple_repeat	1	35	(0)	3706675
60	0.0	0.0	0.0	chr7	100478351	100478401	(58867572)	+	(GT)n	Simple_repeat	1	51	(0)	3706676
59	31.8	0.0	0.6	chr7	100520613	100520759	(58825214)	+	(TA)n	Simple_repeat	1	147	(0)	3706791
43	0.0	0.0	0.0	chr7	100520760	100520796	(58825177)	+	(AG)n	Simple_repeat	1	37	(0)	3706792
2150	9.3	0.0	3.5	chr7	100520797	100521085	(58824888)	C	AluSq2	SINE/Alu	(34)	279	1	3706793
12	18.3	0.0	3.0	chr7	100603022	100603054	(58742919)	+	(CTCC)n	Simple_repeat	1	33	(0)	3706931
45	2.3	0.0	0.0	chr7	100673816	100673860	(58672113)	+	(CGC)n	Simple_repeat	1	45	(0)	3707120
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
19	18.4	4.1	0.0	chr7	101059047	101059095	(58286878)	+	(AGAC)n	Simple_repeat	1	51	(0)	3707871
51	0.0	0.0	0.0	chr7	101059107	101059150	(58286823)	+	(GA)n	Simple_repeat	1	44	(0)	3707872
302	32.6	9.3	2.0	chr7	101059237	101059386	(58286587)	+	MIR3	SINE/MIR	44	205	(3)	3707873
70	6.4	0.0	0.0	chr7	101063661	101063742	(58282231)	+	(TC)n	Simple_repeat	1	82	(0)	3707890
1955	17.1	9.0	1.5	chr7	101063743	101063935	(58282038)	+	MSTB	LTR/ERVL-MaLR	199	420	(6)	3707886
1881	15.6	4.5	0.0	chr7	101112963	101113257	(58232716)	+	AluSz6	SINE/Alu	2	310	(2)	3708018
96	11.3	0.0	3.0	chr7	101113260	101113424	(58232549)	+	(GAAA)n	Simple_repeat	1	165	(0)	3708019
2173	14.8	0.0	0.0	chr7	101113435	101113745	(58232228)	+	AluSx	SINE/Alu	2	312	(0)	3708020
240	37.3	1.2	1.9	chr7	101414122	101414282	(57931691)	C	UCON15	Unknown	(9)	338	179	3708749
29	9.6	0.0	0.0	chr7	101414382	101414426	(57931547)	+	(CTCT)n	Simple_repeat	1	45	(0)	3708750
33	3.1	0.0	0.0	chr7	101414427	101414459	(57931514)	+	(TG)n	Simple_repeat	1	33	(0)	3708751
2115	10.1	0.4	0.0	chr7	101414460	101414735	(57931238)	C	AluSx1	SINE/Alu	(34)	278	2	3708752
97	23.8	0.5	0.0	chr7	101475728	101475967	(57870006)	+	(TCTC)n	Simple_repeat	1	241	(0)	3708913
1901	15.6	5.1	0.0	chr7	101475968	101476142	(57869831)	C	AluSx	SINE/Alu	(1)	311	122	3708914
210	24.2	5.7	0.0	chr7	101609365	101609430	(57736543)	+	L2	LINE/L2	847	916	(2503)	3709223
68	21.3	2.6	3.0	chr7	101609456	101609481	(57736492)	+	(TTCT)n	Simple_repeat	1	26	(0)	3709224
32	2.8	0.0	2.6	chr7	101609482	101609520	(57736453)	+	(TCCC)n	Simple_repeat	1	39	(0)	3709225
68	21.3	2.6	3.0	chr7	101609521	101609686	(57736287)	+	(TTCT)n	Simple_repeat	3	167	(0)	3709226
1205	18.8	1.5	0.0	chr7	101772376	101772577	(57573396)	+	AluSx4	SINE/Alu	105	309	(1)	3709639
58	31.8	3.2	0.8	chr7	101772582	101772868	(57573105)	+	GA-rich	Low_complexity	1	293	(0)	3709640
204	30.9	11.3	6.2	chr7	102626677	102626717	(56719256)	+	L2b	LINE/L2	3141	3187	(188)	3711454
2250	12.7	0.7	0.0	chr7	102626718	102626904	(56719069)	C	AluSz	SINE/Alu	(0)	312	126	3711455
10181	19.0	3.7	5.4	chr7	102735189	102735972	(56610001)	C	L1MC1	LINE/L1	(0)	3088	2304	3711659
4193	15.7	5.0	10.9	chr7	102735973	102736197	(56609776)	C	MER6	DNA/TcMar-Tigger	(1)	864	716	3711662
1551	16.9	0.0	0.0	chr7	102736198	102736422	(56609551)	C	AluJo	SINE/Alu	(87)	225	1	3711663
5282	11.4	3.4	1.5	chr7	103023313	103024135	(56321838)	+	L1PA15	LINE/L1	5836	6682	(10)	3712078
60	0.0	0.0	0.0	chr7	103024136	103024186	(56321787)	+	(AG)n	Simple_repeat	1	51	(0)	3712087
2477	7.5	0.3	0.7	chr7	103024246	103024552	(56321421)	+	AluSq	SINE/Alu	2	307	(6)	3712088
14	27.2	3.5	0.0	chr7	103074995	103075051	(56270922)	+	(CGCCC)n	Simple_repeat	1	59	(0)	3712168
7992	7.6	5.0	1.4	chr7	103153306	103154415	(56191558)	+	HERVIP10FH-int	LTR/ERV1	261	1411	(5485)	3712300
193	21.1	1.0	0.2	chr7	103773093	103773479	(55572494)	+	(TCTC)n	Simple_repeat	1	390	(0)	3713145
2281	9.7	1.4	0.0	chr7	103773480	103773769	(55572204)	C	AluSz	SINE/Alu	(18)	294	1	3713146
273	40.8	0.0	0.0	chr7	104884441	104884543	(54461430)	+	MER5A	DNA/hAT-Charlie	87	189	(0)	3714745
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
1731	16.3	8.8	4.4	chr7	105358740	105359150	(53986823)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	2	3715627
259	22.9	17.9	2.0	chr7	105389399	105389496	(53956477)	+	MIRc	SINE/MIR	18	134	(134)	3715696
279	27.5	4.8	0.0	chr7	105389613	105389692	(53956281)	C	MIRb	SINE/MIR	(86)	182	99	3715697
2152	10.4	2.0	0.3	chr7	105396356	105396642	(53949331)	+	AluY	SINE/Alu	2	293	(18)	3715720
74	17.3	6.7	4.3	chr7	105396645	105396897	(53949076)	+	GA-rich	Low_complexity	1	258	(0)	3715721
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
359	32.0	3.3	0.0	chr7	105850422	105850568	(53495405)	C	MIRb	SINE/MIR	(16)	252	101	3716683
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
16	4.5	0.0	0.0	chr7	106492622	106492644	(52853329)	+	(GAGG)n	Simple_repeat	1	23	(0)	3717653
58	1.9	0.0	0.0	chr7	106492677	106492730	(52853243)	+	(TC)n	Simple_repeat	1	54	(0)	3717654
12	23.8	3.9	1.9	chr7	106660827	106660877	(52685096)	+	(CGCCGC)n	Simple_repeat	1	53	(0)	3717897
24	14.4	0.0	0.0	chr7	107115653	107115691	(52230282)	+	(AG)n	Simple_repeat	1	39	(0)	3718616
579	29.3	16.0	5.2	chr7	107115726	107116088	(52229885)	+	MLT1I	LTR/ERVL-MaLR	3	404	(7)	3718617
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
20	5.8	0.0	9.1	chr7	107597226	107597280	(51748693)	+	(TCCT)n	Simple_repeat	1	50	(0)	3719311
55	0.0	0.0	0.0	chr7	108725898	108725944	(50620029)	+	(GA)n	Simple_repeat	1	47	(0)	3720942
664	28.8	11.5	1.2	chr7	108725967	108726387	(50619586)	C	L1MEc	LINE/L1	(5915)	485	21	3720941
51	4.7	1.5	0.0	chr7	110909886	110909951	(48436022)	+	(AG)n	Simple_repeat	1	67	(0)	3723625
411	31.3	7.5	3.4	chr7	112136275	112136479	(47209494)	+	Tigger19a	DNA/TcMar-Tigger	14	227	(96)	3725337
367	33.9	5.2	8.0	chr7	112136503	112136789	(47209184)	C	L2c	LINE/L2	(35)	3352	3073	3725338
299	29.6	7.2	9.8	chr7	112137215	112137458	(47208515)	C	L3	LINE/CR1	(23)	4076	3840	3725341
438	30.0	3.4	0.6	chr7	112137477	112137647	(47208326)	+	MER104	DNA/TcMar-Tc2	6	181	(0)	3725342
267	35.0	11.7	2.6	chr7	112150983	112151141	(47194832)	+	L3b	LINE/CR1	4916	5098	(134)	3725360
480	29.3	5.8	5.5	chr7	112151142	112151399	(47194574)	+	MIRb	SINE/MIR	2	258	(10)	3725361
255	25.8	10.2	8.7	chr7	112162262	112162444	(47183529)	+	MLT1K	LTR/ERVL-MaLR	59	244	(351)	3725379
31	5.9	0.0	0.0	chr7	112162502	112162537	(47183436)	+	(TC)n	Simple_repeat	1	36	(0)	3725380
11	17.3	7.7	0.0	chr7	112162538	112162576	(47183397)	+	(CCCACTC)n	Simple_repeat	1	42	(0)	3725381
400	23.4	5.0	3.7	chr7	112263770	112263907	(47082066)	C	Charlie24	DNA/hAT-Charlie	(3)	2447	2327	3725524
2259	11.2	0.0	0.7	chr7	112280632	112280927	(47065046)	C	AluSx1	SINE/Alu	(18)	294	1	3725555
238	34.5	3.5	2.3	chr7	112566933	112567018	(46778955)	+	MER131	DNA?	7	93	(122)	3726012
340	31.2	2.0	0.0	chr7	112572697	112572792	(46773181)	+	L4_A_Mam	LINE/RTE-X	1331	1428	(3562)	3726024
29	11.8	0.0	0.0	chr7	112721800	112721835	(46624138)	+	(CA)n	Simple_repeat	1	36	(0)	3726214
38	2.8	0.0	0.0	chr7	112721836	112721872	(46624101)	+	(CT)n	Simple_repeat	1	37	(0)	3726215
29	11.8	0.0	0.0	chr7	112721873	112721882	(46624091)	+	(CA)n	Simple_repeat	1	10	(0)	3726216
211	33.6	2.7	3.6	chr7	112721970	112722080	(46623893)	+	L2a	LINE/L2	3317	3426	(0)	3726213
14	21.1	0.0	0.0	chr7	113085944	113085977	(46259996)	+	G-rich	Low_complexity	1	34	(0)	3726682
1658	15.7	7.3	1.6	chr7	113103146	113103314	(46242659)	C	MLT1A0	LTR/ERVL-MaLR	(15)	350	162	3726705
54	1.9	1.9	0.0	chr7	113103315	113103368	(46242605)	+	(AG)n	Simple_repeat	1	55	(0)	3726706
1658	15.7	7.3	1.6	chr7	113103369	113103521	(46242452)	C	MLT1A0	LTR/ERVL-MaLR	(204)	161	9	3726705
49	4.1	0.0	0.0	chr7	113150219	113150269	(46195704)	+	(TC)n	Simple_repeat	1	51	(0)	3726774
41	2.6	0.0	0.0	chr7	113680966	113681005	(45664968)	+	(GA)n	Simple_repeat	1	40	(0)	3727417
46	4.3	0.0	0.0	chr7	114086235	114086282	(45259691)	+	(CA)n	Simple_repeat	1	48	(0)	3727931
12	10.2	2.7	7.9	chr7	114086390	114086426	(45259547)	+	(CCCG)n	Simple_repeat	1	38	(0)	3727932
49	0.0	0.0	0.0	chr7	114132542	114132583	(45213390)	+	(TG)n	Simple_repeat	1	42	(0)	3727990
3322	28.5	6.8	5.0	chr7	114132584	114133559	(45212414)	C	L2a	LINE/L2	(215)	3211	2195	3727989
76	14.1	1.1	6.3	chr7	114176171	114176326	(45169647)	+	(TTTC)n	Simple_repeat	1	146	(0)	3728052
1982	15.6	0.3	2.8	chr7	114176327	114176646	(45169327)	C	AluJb	SINE/Alu	(0)	312	1	3728053
1589	16.7	18.8	1.7	chr7	114247983	114248180	(45097793)	C	MLT2B4	LTR/ERVL	(55)	501	231	3728167
47	4.2	0.0	0.0	chr7	114248181	114248229	(45097744)	+	(AG)n	Simple_repeat	1	49	(0)	3728169
1589	16.7	18.8	1.7	chr7	114248230	114248444	(45097529)	C	MLT2B4	LTR/ERVL	(326)	230	2	3728167
724	15.3	22.3	0.0	chr7	114493358	114493551	(44852422)	+	L1MC1	LINE/L1	6090	6327	(6)	3728463
33	3.1	0.0	0.0	chr7	114626532	114626564	(44719409)	+	(TC)n	Simple_repeat	1	33	(0)	3728631
13	28.1	0.0	3.3	chr7	114626565	114626620	(44719353)	+	(ATAT)n	Simple_repeat	4	57	(0)	3728632
23	22.9	3.5	0.0	chr7	114931038	114931095	(44414878)	+	(TC)n	Simple_repeat	1	60	(0)	3729046
6386	15.3	3.7	3.0	chr7	115108549	115109455	(44236518)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	320	3729272
58	1.9	0.0	0.0	chr7	115109456	115109509	(44236464)	+	(AG)n	Simple_repeat	1	54	(0)	3729273
6386	15.3	3.7	3.0	chr7	115109510	115109820	(44236153)	C	Tigger3b	DNA/TcMar-Tigger	(912)	319	3	3729272
46	0.0	0.0	0.0	chr7	115424035	115424073	(43921900)	+	(TC)n	Simple_repeat	1	39	(0)	3729715
59	6.2	0.0	0.0	chr7	115637752	115637819	(43708154)	+	(TC)n	Simple_repeat	1	68	(0)	3730019
923	20.7	0.7	0.0	chr7	115637826	115637975	(43707998)	C	FAM	SINE/Alu	(34)	151	1	3730020
2122	23.1	11.5	3.9	chr7	115724285	115725031	(43620942)	+	L1ME3A	LINE/L1	5361	6171	(2)	3730119
1323	6.6	0.0	0.0	chr7	115805418	115805598	(43540375)	+	L1P1	LINE/L1	4972	5152	(994)	3730234
18	28.7	2.9	0.0	chr7	116240432	116240499	(43105474)	+	(TCTC)n	Simple_repeat	1	70	(0)	3730781
22333	13.7	3.5	1.3	chr7	116290726	116292296	(43053677)	+	L1MA3	LINE/L1	166	1759	(5806)	3730847
42	4.7	0.0	0.0	chr7	116292297	116292341	(43053632)	+	(AG)n	Simple_repeat	1	45	(0)	3730849
22333	13.4	3.4	1.3	chr7	116292342	116294295	(43051678)	+	L1MA3	LINE/L1	1760	3782	(3783)	3730847
39	5.8	3.7	0.0	chr7	116305441	116305494	(43040479)	+	(TC)n	Simple_repeat	1	56	(0)	3730864
355	31.2	8.9	5.3	chr7	116429947	116430173	(42915800)	C	HAL1	LINE/L1	(1452)	1055	820	3731031
16	19.2	0.0	0.0	chr7	116430286	116430315	(42915658)	+	(CT)n	Simple_repeat	1	30	(0)	3731032
117	11.5	0.0	0.0	chr7	116430319	116430507	(42915466)	+	(TC)n	Simple_repeat	1	189	(0)	3731033
28	12.9	0.0	0.0	chr7	116430570	116430612	(42915361)	+	(A)n	Simple_repeat	1	43	(0)	3731034
17	0.0	0.0	0.0	chr7	116466398	116466416	(42879557)	+	(TG)n	Simple_repeat	1	19	(0)	3731077
55	1.8	1.8	0.0	chr7	116466417	116466471	(42879502)	+	(GA)n	Simple_repeat	1	56	(0)	3731078
13	21.9	2.3	2.2	chr7	116524797	116524840	(42821133)	+	(CTCGCTG)n	Simple_repeat	1	45	(0)	3731164
395	32.3	2.4	0.0	chr7	116637759	116637922	(42708051)	+	MER103C	DNA/hAT-Charlie	121	288	(9)	3731341
73	0.0	0.0	0.0	chr7	116638062	116638123	(42707850)	+	(TC)n	Simple_repeat	1	62	(0)	3731342
37	7.0	0.0	0.0	chr7	116677970	116678014	(42667959)	+	(TC)n	Simple_repeat	1	45	(0)	3731407
1788	17.1	0.0	0.7	chr7	116715970	116716250	(42629723)	+	AluJb	SINE/Alu	2	280	(32)	3731456
115	19.8	2.5	1.4	chr7	116716251	116716276	(42629697)	+	GA-rich	Low_complexity	17	42	(0)	3731457
67	1.6	0.0	0.0	chr7	116716277	116716338	(42629635)	+	(GA)n	Simple_repeat	1	62	(0)	3731458
115	19.8	2.5	1.4	chr7	116716339	116716569	(42629404)	+	GA-rich	Low_complexity	43	279	(0)	3731459
996	32.5	7.1	5.6	chr7	116729870	116730879	(42615094)	C	L2c	LINE/L2	(1)	3386	2378	3731477
270	9.5	0.0	0.0	chr7	116730923	116730964	(42615009)	C	U7	snRNA	(20)	43	2	3731478
410	29.1	5.8	10.1	chr7	116730967	116731184	(42614789)	C	MIR	SINE/MIR	(34)	228	21	3731479
670	33.0	1.9	0.5	chr7	116805394	116805600	(42540373)	+	MIR	SINE/MIR	6	215	(47)	3731559
300	30.4	14.1	2.5	chr7	116931117	116931427	(42414546)	C	L2a	LINE/L2	(6)	3420	3013	3731791
11	24.1	2.6	0.0	chr7	117020253	117020291	(42325682)	+	(TCCTGC)n	Simple_repeat	1	40	(0)	3731967
5946	5.8	8.5	10.2	chr7	119566189	119567161	(39778812)	+	HERV17-int	LTR/ERV1	61	1015	(7611)	3735307
311	29.0	10.3	8.0	chr7	120842291	120842489	(38503484)	C	L2a	LINE/L2	(2)	3424	3182	3736886
260	27.5	14.2	6.4	chr7	120852754	120852921	(38493052)	+	MIR	SINE/MIR	29	192	(70)	3736904
1122	20.7	1.7	0.8	chr7	120944846	120945084	(38400889)	C	MER97b	DNA/hAT-Tip100	(807)	242	2	3737024
593	33.5	5.4	2.0	chr7	120945145	120945342	(38400631)	C	MIRb	SINE/MIR	(32)	236	32	3737025
32	16.2	0.0	0.0	chr7	120988747	120988801	(38357172)	+	(GT)n	Simple_repeat	1	55	(0)	3737075
1267	19.1	3.2	17.9	chr7	121686062	121686326	(37659647)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	170	3738059
43	2.5	0.0	0.0	chr7	121686327	121686367	(37659606)	+	(AG)n	Simple_repeat	1	41	(0)	3738060
1267	19.1	3.2	17.9	chr7	121686368	121686542	(37659431)	C	MLT1A	LTR/ERVL-MaLR	(205)	169	1	3738059
1732	23.6	5.6	3.2	chr7	121690961	121691029	(37654944)	C	MLT2B1	LTR/ERVL	(0)	520	456	3738067
46	0.0	0.0	0.0	chr7	121691030	121691068	(37654905)	+	(AG)n	Simple_repeat	1	39	(0)	3738068
1732	23.6	5.6	3.2	chr7	121691069	121691436	(37654537)	C	MLT2B1	LTR/ERVL	(65)	455	72	3738067
1998	13.0	2.4	4.1	chr7	122138252	122138595	(37207378)	C	MER44A	DNA/TcMar-Tigger	(0)	339	2	3738689
13	8.5	0.0	3.7	chr7	122144145	122144171	(37201802)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3738703
53	9.6	1.3	0.0	chr7	122261615	122261692	(37084281)	+	(GA)n	Simple_repeat	1	79	(0)	3738867
515	30.5	7.1	5.2	chr7	122261771	122262022	(37083951)	+	MIRb	SINE/MIR	5	268	(0)	3738868
555	26.7	6.1	6.7	chr7	122294827	122295256	(37050717)	C	L1MC5	LINE/L1	(43)	9261	8835	3738920
24	12.2	0.0	0.0	chr7	122295259	122295294	(37050679)	+	(CT)n	Simple_repeat	1	36	(0)	3738921
336	21.4	1.1	8.2	chr7	122295298	122295394	(37050579)	C	HAL1M8	LINE/L1	(40)	2951	2862	3738922
53	0.0	0.0	0.0	chr7	122315275	122315319	(37030654)	+	(CT)n	Simple_repeat	1	45	(0)	3738939
64	1.0	10.3	0.0	chr7	122476998	122477094	(36868879)	+	(GA)n	Simple_repeat	1	107	(0)	3739135
270	22.5	0.0	5.3	chr7	122477106	122477180	(36868793)	C	MER58A	DNA/hAT-Charlie	(142)	82	12	3739136
383	27.7	7.4	11.3	chr7	122527454	122527582	(36818391)	C	LTR79	LTR/ERVL	(1)	526	395	3739209
42	0.0	0.0	0.0	chr7	122527583	122527618	(36818355)	+	(AG)n	Simple_repeat	1	36	(0)	3739210
383	27.7	7.4	11.3	chr7	122527619	122527797	(36818176)	C	LTR79	LTR/ERVL	(133)	394	231	3739209
17	5.3	9.3	4.3	chr7	122886177	122886219	(36459754)	+	(GCC)n	Simple_repeat	1	47	(0)	3739683
46	4.3	0.0	0.0	chr7	123660277	123660324	(35685649)	+	(TC)n	Simple_repeat	1	48	(0)	3740776
22	7.3	0.0	0.0	chr7	123660325	123660353	(35685620)	+	(AC)n	Simple_repeat	1	29	(0)	3740777
44	2.4	0.0	0.0	chr7	123688998	123689039	(35656934)	+	(CT)n	Simple_repeat	1	42	(0)	3740808
1922	11.7	0.3	10.5	chr7	123716205	123716547	(35629426)	C	AluSx1	SINE/Alu	(4)	308	1	3740850
29	31.4	1.0	1.0	chr7	123716602	123716704	(35629269)	+	GA-rich	Low_complexity	1	104	(0)	3740851
61	5.4	0.0	0.0	chr7	125052791	125052867	(34293106)	+	(AG)n	Simple_repeat	1	77	(0)	3742656
2228	10.4	0.0	0.0	chr7	125052868	125053146	(34292827)	C	AluSx4	SINE/Alu	(30)	280	2	3742657
1558	20.8	2.5	1.3	chr7	125063829	125064145	(34281828)	C	MLT2B3	LTR/ERVL	(14)	702	382	3742668
87	1.8	4.5	0.0	chr7	125064146	125064257	(34281716)	+	(GA)n	Simple_repeat	1	117	(0)	3742670
1237	18.3	0.9	3.0	chr7	125064258	125064493	(34281480)	C	MLT2B3	LTR/ERVL	(321)	395	165	3742668
1177	23.1	8.1	6.0	chr7	125546871	125547029	(33798944)	+	MLT1A	LTR/ERVL-MaLR	1	172	(202)	3743271
49	4.0	0.0	0.0	chr7	125547030	125547080	(33798893)	+	(CT)n	Simple_repeat	1	51	(0)	3743272
1177	23.1	8.1	6.0	chr7	125547081	125547284	(33798689)	+	MLT1A	LTR/ERVL-MaLR	173	372	(2)	3743271
423	32.6	8.6	2.6	chr7	127336692	127336821	(32009152)	+	LTR78	LTR/ERV1	382	530	(774)	3745588
54	0.0	0.0	0.0	chr7	127336825	127336870	(32009103)	+	(GA)n	Simple_repeat	1	46	(0)	3745591
279	27.2	5.2	1.1	chr7	127336971	127337063	(32008910)	+	MER5C1	DNA/hAT-Charlie	3	99	(164)	3745592
15	12.0	3.7	0.0	chr7	127378705	127378731	(31967242)	+	(CA)n	Simple_repeat	1	28	(0)	3745646
17	5.0	0.0	0.0	chr7	127378731	127378751	(31967222)	+	(AG)n	Simple_repeat	1	21	(0)	3745647
12	22.7	0.0	2.6	chr7	127909004	127909041	(31436932)	+	(TACCTC)n	Simple_repeat	1	38	(0)	3746385
286	32.6	16.1	0.0	chr7	128040774	128040945	(31305028)	C	MamRTE1	LINE/RTE-BovB	(670)	3142	2938	3746535
696	21.1	0.0	1.5	chr7	128041155	128041287	(31304686)	+	FLAM_C	SINE/Alu	3	133	(10)	3746536
2187	12.7	0.3	0.0	chr7	128346177	128346476	(30999497)	C	AluSx1	SINE/Alu	(11)	301	1	3747046
2466	11.7	0.9	9.5	chr7	128346477	128346598	(30999375)	C	HSMAR2	DNA/TcMar-Mariner	(58)	1244	1123	3747045
65	0.0	0.0	0.0	chr7	128346599	128346653	(30999320)	+	(TC)n	Simple_repeat	1	55	(0)	3747047
2466	11.7	0.9	9.5	chr7	128346654	128347015	(30998958)	C	HSMAR2	DNA/TcMar-Mariner	(180)	1122	801	3747045
19	32.7	0.0	1.2	chr7	129225229	129225309	(30120664)	+	(GGCCCC)n	Simple_repeat	1	81	(0)	3748760
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
16	16.9	7.3	1.7	chr7	129612180	129612234	(29733739)	+	G-rich	Low_complexity	1	59	(0)	3749525
22	12.7	0.0	4.3	chr7	129612296	129612342	(29733631)	+	(GCGG)n	Simple_repeat	1	47	(0)	3749526
1768	14.0	9.6	0.0	chr7	129682939	129683202	(29662771)	C	AluSz	SINE/Alu	(20)	292	1	3749660
38	0.0	0.0	0.0	chr7	129683289	129683321	(29662652)	+	(GT)n	Simple_repeat	1	33	(0)	3749661
25	0.0	0.0	0.0	chr7	129683322	129683346	(29662627)	+	(GA)n	Simple_repeat	1	25	(0)	3749662
2066	13.1	0.0	0.3	chr7	129683348	129683629	(29662344)	C	AluSx	SINE/Alu	(31)	281	1	3749663
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
2412	11.8	0.3	0.0	chr7	129850536	129850840	(29495133)	+	AluSg4	SINE/Alu	1	306	(4)	3749969
40	21.1	5.7	0.0	chr7	129850841	129850946	(29495027)	+	GA-rich	Low_complexity	1	112	(0)	3749970
313	25.5	12.4	0.7	chr7	129979634	129979775	(29366198)	+	L2	LINE/L2	2410	2570	(849)	3750252
44	0.0	0.0	0.0	chr7	129979882	129979919	(29366054)	+	(TC)n	Simple_repeat	1	38	(0)	3750253
2031	8.9	0.8	0.0	chr7	129979999	129980257	(29365716)	+	AluSz	SINE/Alu	44	304	(8)	3750254
31	3.3	0.0	0.0	chr7	130248526	130248556	(29097417)	+	(TC)n	Simple_repeat	1	31	(0)	3750855
1995	19.4	3.8	14.3	chr7	130872324	130872950	(28473023)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	3	3751760
40	16.3	0.0	0.0	chr7	131235173	131235257	(28110716)	+	(TCTCTC)n	Simple_repeat	1	85	(0)	3752425
15	5.6	0.0	0.0	chr7	131235296	131235314	(28110659)	+	(TG)n	Simple_repeat	1	19	(0)	3752426
940	23.1	0.0	10.3	chr7	131524099	131524346	(27821627)	+	L1MD3	LINE/L1	3931	4149	(1997)	3752948
27	5.3	2.4	2.4	chr7	131524348	131524379	(27821594)	+	(AC)n	Simple_repeat	1	32	(0)	3752950
34	0.0	0.0	0.0	chr7	131524380	131524408	(27821565)	+	(AG)n	Simple_repeat	1	29	(0)	3752951
4815	23.1	9.6	3.6	chr7	131524420	131525306	(27820667)	+	L1MD3	LINE/L1	5283	6269	(1726)	3752948
400	26.1	0.0	1.1	chr7	131545408	131545500	(27800473)	+	MER81	DNA/hAT-Blackjack	23	114	(0)	3752989
345	27.3	1.5	2.2	chr7	131545648	131545782	(27800191)	+	MER103C	DNA/hAT-Charlie	61	194	(103)	3752990
12	17.6	11.7	1.5	chr7	131556299	131556358	(27789615)	+	(GCA)n	Simple_repeat	1	67	(0)	3753008
24	24.7	1.5	0.0	chr7	131556574	131556640	(27789333)	+	(GCG)n	Simple_repeat	1	68	(0)	3753009
46	4.3	0.0	0.0	chr7	131749680	131749727	(27596246)	+	(GA)n	Simple_repeat	1	48	(0)	3753395
241	21.7	4.8	0.0	chr7	131749785	131749844	(27596129)	+	MLT1K	LTR/ERVL-MaLR	523	585	(10)	3753396
6022	18.6	2.7	2.8	chr7	131752745	131753616	(27592357)	C	L1MC1	LINE/L1	(1250)	4896	4018	3753398
15	5.6	0.0	0.0	chr7	131753628	131753646	(27592327)	+	(T)n	Simple_repeat	1	19	(0)	3753401
22	0.0	0.0	0.0	chr7	131753721	131753744	(27592229)	+	(TC)n	Simple_repeat	1	24	(0)	3753402
1105	23.1	1.1	10.1	chr7	131776438	131776652	(27569321)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	175	3753448
59	0.0	0.0	0.0	chr7	131776653	131776702	(27569271)	+	(AG)n	Simple_repeat	1	50	(0)	3753449
1105	23.1	1.1	10.1	chr7	131776703	131776794	(27569179)	C	MLT1A	LTR/ERVL-MaLR	(200)	174	95	3753448
30	13.7	0.0	0.0	chr7	131950318	131950365	(27395608)	+	(TC)n	Simple_repeat	1	48	(0)	3753720
431	29.7	1.3	3.3	chr7	131950387	131950539	(27395434)	C	MIRb	SINE/MIR	(99)	169	20	3753721
23	18.0	3.4	1.6	chr7	132031209	132031271	(27314702)	+	(CTCT)n	Simple_repeat	1	64	(0)	3753837
36	2.3	0.0	0.0	chr7	132188949	132188993	(27156980)	+	(GAAAG)n	Simple_repeat	1	45	(0)	3754043
82	1.4	0.0	0.0	chr7	132188994	132189067	(27156906)	+	(GA)n	Simple_repeat	1	74	(0)	3754044
41	17.7	2.8	3.6	chr7	132577367	132577498	(26768475)	+	(CCTC)n	Simple_repeat	1	130	(0)	3754597
21	15.8	0.0	0.0	chr7	132615782	132615817	(26730156)	+	(CA)n	Simple_repeat	1	36	(0)	3754659
30	16.6	0.0	1.6	chr7	132615832	132615894	(26730079)	+	(CCCTCTC)n	Simple_repeat	1	63	(0)	3754660
43	0.0	0.0	0.0	chr7	132615928	132615964	(26730009)	+	(TC)n	Simple_repeat	1	37	(0)	3754661
2799	26.7	10.1	3.6	chr7	132628081	132628326	(26717647)	C	HAL1	LINE/L1	(783)	1724	1462	3754681
38	7.4	1.7	1.7	chr7	132628327	132628385	(26717588)	+	(TC)n	Simple_repeat	1	60	(0)	3754683
2799	26.7	10.1	3.6	chr7	132628386	132629398	(26716575)	C	HAL1	LINE/L1	(1046)	1461	375	3754681
402	19.5	8.1	3.4	chr7	132711226	132711342	(26634631)	C	MamTip1	DNA/hAT-Tip100	(57)	210	88	3754820
42	0.0	0.0	0.0	chr7	132711347	132711382	(26634591)	+	(GA)n	Simple_repeat	1	36	(0)	3754821
1694	16.8	3.4	1.8	chr7	132859990	132860275	(26485698)	+	AluJb	SINE/Alu	1	291	(21)	3755033
33	3.1	0.0	0.0	chr7	132860303	132860335	(26485638)	+	(AG)n	Simple_repeat	1	33	(0)	3755034
296	29.1	10.7	3.3	chr7	132860373	132860493	(26485480)	+	L2b	LINE/L2	2480	2610	(809)	3755032
1768	14.3	1.4	2.7	chr7	133096755	133097047	(26248926)	+	AluJr	SINE/Alu	2	290	(22)	3755381
38	0.0	0.0	0.0	chr7	133097048	133097080	(26248893)	+	(AG)n	Simple_repeat	1	33	(0)	3755382
1641	16.5	8.2	3.2	chr7	133097114	133097451	(26248522)	C	MLT2C1	LTR/ERVL	(40)	357	2	3755380
68	0.0	0.0	0.0	chr7	133243117	133243174	(26102799)	+	(TC)n	Simple_repeat	1	58	(0)	3755663
400	38.6	9.4	0.5	chr7	133491915	133492310	(25853663)	C	L2c	LINE/L2	(408)	3011	2577	3756016
13	23.2	4.3	0.0	chr7	133492463	133492508	(25853465)	+	(TCTAA)n	Simple_repeat	1	48	(0)	3756019
232	34.0	3.6	2.8	chr7	133934739	133934847	(25411126)	+	L3b	LINE/CR1	4794	4903	(329)	3756701
35	0.0	0.0	0.0	chr7	133941822	133941851	(25404122)	+	(TC)n	Simple_repeat	1	30	(0)	3756715
57	1.9	0.0	0.0	chr7	133971362	133971414	(25374559)	+	(AG)n	Simple_repeat	1	53	(0)	3756747
42	22.0	2.7	1.8	chr7	133971415	133971496	(25374477)	+	(TA)n	Simple_repeat	2	85	(0)	3756748
191	25.8	1.6	11.4	chr7	134313820	134313889	(25032084)	C	L3	LINE/CR1	(0)	4099	4037	3757273
249	16.4	25.5	0.0	chr7	134886599	134886671	(24459302)	+	Plat_L3	LINE/CR1	3160	3257	(329)	3758180
192	30.6	4.5	1.2	chr7	134886681	134886766	(24459207)	+	L3b	LINE/CR1	4973	5061	(171)	3758181
22	0.0	0.0	0.0	chr7	135496632	135496655	(23849318)	+	(CT)n	Simple_repeat	1	24	(0)	3759053
359	33.3	2.6	6.5	chr7	135569922	135570052	(23775921)	C	MIRb	SINE/MIR	(11)	257	133	3759211
50	0.0	0.0	0.0	chr7	135570053	135570095	(23775878)	+	(AG)n	Simple_repeat	1	43	(0)	3759212
359	33.3	2.6	6.5	chr7	135570096	135570162	(23775811)	C	MIRb	SINE/MIR	(136)	132	67	3759211
2219	10.9	0.0	2.2	chr7	135570197	135570509	(23775464)	C	AluSx	SINE/Alu	(1)	311	6	3759213
834	11.9	0.9	0.0	chr7	135629359	135629467	(23716506)	+	AluJo	SINE/Alu	1	110	(202)	3759319
61	3.4	0.0	0.0	chr7	135629470	135629530	(23716443)	+	(TC)n	Simple_repeat	1	61	(0)	3759320
2239	12.0	0.7	0.0	chr7	135629531	135629822	(23716151)	C	AluSx	SINE/Alu	(16)	296	3	3759321
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
887	25.2	4.5	3.2	chr7	135716663	135716879	(23629094)	+	MIRb	SINE/MIR	26	245	(23)	3759460
455	30.5	34.2	4.0	chr7	135716885	135717236	(23628737)	C	L3	LINE/CR1	(609)	3490	3019	3759458
50	2.2	0.0	0.0	chr7	135719782	135719828	(23626145)	+	(TG)n	Simple_repeat	1	47	(0)	3759466
32	20.9	3.5	2.2	chr7	135719863	135719949	(23626024)	+	GA-rich	Low_complexity	1	90	(0)	3759467
30	3.5	0.0	0.0	chr7	135719957	135719986	(23625987)	+	(GA)n	Simple_repeat	1	30	(0)	3759468
370	29.2	10.0	1.8	chr7	135720256	135720475	(23625498)	+	MIR	SINE/MIR	5	244	(18)	3759469
36	4.8	0.0	0.0	chr7	137846118	137846161	(21499812)	+	(CT)n	Simple_repeat	1	44	(0)	3762476
42	16.6	4.2	0.0	chr7	137916744	137916838	(21429135)	+	(GAGCGA)n	Simple_repeat	1	99	(0)	3762586
2150	10.7	0.3	2.9	chr7	137952808	137953116	(21392857)	C	AluSx1	SINE/Alu	(11)	301	1	3762643
245	28.2	22.0	0.0	chr7	137953230	137953339	(21392634)	+	MamGypsy2-LTR	LTR/Gypsy	43	183	(0)	3762644
41	0.0	0.0	0.0	chr7	137972737	137972771	(21373202)	+	(AG)n	Simple_repeat	1	35	(0)	3762679
4240	12.6	3.3	4.4	chr7	139001824	139002530	(20343443)	+	MER41-int	LTR/ERV1	1	609	(5337)	3764713
46	2.3	0.0	0.0	chr7	139002532	139002575	(20343398)	+	(CT)n	Simple_repeat	1	44	(0)	3764714
13591	10.9	2.8	2.0	chr7	139002576	139005742	(20340231)	+	MER41-int	LTR/ERV1	1421	5944	(2)	3764715
85	10.9	0.0	0.0	chr7	139087359	139087486	(20258487)	+	(GAGA)n	Simple_repeat	1	128	(0)	3764890
1150	18.3	7.3	0.0	chr7	139389939	139390129	(19955844)	+	AluJr	SINE/Alu	54	259	(53)	3765479
29	0.0	0.0	0.0	chr7	139390216	139390240	(19955733)	+	(TC)n	Simple_repeat	1	25	(0)	3765480
1993	11.5	10.4	0.4	chr7	139390251	139390528	(19955445)	C	AluSz	SINE/Alu	(3)	309	1	3765481
1828	17.1	0.4	0.4	chr7	139729043	139729323	(19616650)	+	AluJb	SINE/Alu	2	282	(30)	3766095
70	0.0	0.0	0.0	chr7	139729325	139729384	(19616589)	+	(GA)n	Simple_repeat	1	60	(0)	3766096
94	13.6	1.3	0.0	chr7	139878109	139878263	(19467710)	+	(GA)n	Simple_repeat	1	157	(0)	3766353
416	31.9	11.1	1.7	chr7	139984583	139984960	(19361013)	+	L1MC4	LINE/L1	940	1360	(1215)	3766520
2355	9.2	0.3	0.0	chr7	140185888	140186181	(19159792)	+	AluSg	SINE/Alu	1	295	(15)	3766844
34	0.0	0.0	0.0	chr7	140186240	140186268	(19159705)	+	(TC)n	Simple_repeat	1	29	(0)	3766845
21	7.0	0.0	0.0	chr7	140186269	140186296	(19159677)	+	(TG)n	Simple_repeat	1	28	(0)	3766846
411	34.6	5.1	3.6	chr7	140186345	140186593	(19159380)	C	L2c	LINE/L2	(0)	3387	3135	3766847
58	4.9	0.0	0.0	chr7	140567288	140567350	(18778623)	+	(GA)n	Simple_repeat	1	63	(0)	3767772
981	17.4	6.7	0.0	chr7	140571643	140571837	(18774136)	+	L1MB3	LINE/L1	5741	5949	(234)	3767779
31	3.3	0.0	0.0	chr7	140571981	140572011	(18773962)	+	(TC)n	Simple_repeat	1	31	(0)	3767780
1976	14.2	0.0	1.0	chr7	140572012	140572306	(18773667)	C	AluJo	SINE/Alu	(20)	292	1	3767781
19	4.3	0.0	0.0	chr7	141071482	141071505	(18274468)	+	(GA)n	Simple_repeat	1	24	(0)	3768721
882	19.9	0.0	0.0	chr7	141109795	141109940	(18236033)	+	AluJo	SINE/Alu	137	282	(30)	3768780
16	0.0	11.8	0.0	chr7	141454521	141454532	(17891441)	+	(CCTTT)n	Simple_repeat	1	15	(0)	3769310
70	0.0	2.5	2.5	chr7	141454533	141454611	(17891362)	+	(TCCTCTCTC)n	Simple_repeat	1	81	(0)	3769311
16	0.0	11.8	0.0	chr7	141454612	141454632	(17891341)	+	(CCTTT)n	Simple_repeat	1	22	(0)	3769312
27	0.0	6.1	0.0	chr7	141731639	141731671	(17614302)	+	(CTCTGGCT)n	Simple_repeat	1	35	(0)	3769744
126	14.7	0.8	1.7	chr7	141731673	141731906	(17614067)	+	(CTCT)n	Simple_repeat	1	236	(0)	3769745
62	24.8	0.0	0.0	chr7	143343693	143343830	(16002143)	+	(TCTC)n	Simple_repeat	1	138	(0)	3771794
2124	11.7	0.3	0.3	chr7	143343831	143344138	(16001835)	C	AluSx	SINE/Alu	(3)	309	2	3771795
36	13.6	0.0	0.0	chr7	144034165	144034221	(15311752)	+	(AG)n	Simple_repeat	1	57	(0)	3772657
628	27.0	7.8	7.8	chr7	144034229	144034574	(15311399)	+	L1MEc	LINE/L1	357	702	(5698)	3772658
53	6.0	1.4	0.0	chr7	146596571	146596640	(12749333)	+	(AG)n	Simple_repeat	1	71	(0)	3776147
761	30.2	3.5	1.2	chr7	146596683	146596937	(12749036)	+	MIR	SINE/MIR	2	262	(0)	3776148
47	2.3	0.0	0.0	chr7	146754535	146754579	(12591394)	+	(TC)n	Simple_repeat	1	45	(0)	3776335
62	0.0	0.0	0.0	chr7	148598764	148598816	(10747157)	+	(AG)n	Simple_repeat	1	53	(0)	3779060
50	20.1	1.7	2.5	chr7	148598817	148598828	(10747145)	+	(TA)n	Simple_repeat	2	13	(0)	3779061
2316	11.5	0.0	0.6	chr7	148598850	148599162	(10746811)	C	AluSq2	SINE/Alu	(2)	311	1	3779062
1928	11.8	8.9	3.6	chr7	148667596	148667794	(10678179)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	3779195
45	2.4	0.0	0.0	chr7	148667795	148667837	(10678136)	+	(CT)n	Simple_repeat	1	43	(0)	3779196
1928	11.8	8.9	3.6	chr7	148667838	148667997	(10677976)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	3779195
12	25.6	3.4	3.3	chr7	148884434	148884494	(10461479)	+	(GCGCGC)n	Simple_repeat	1	61	(0)	3779540
2359	5.5	3.7	0.0	chr7	148884977	148885265	(10460708)	C	AluSp	SINE/Alu	(13)	300	1	3779541
16	25.2	0.0	3.6	chr7	149147655	149147709	(10198264)	+	(CGG)n	Simple_repeat	1	55	(0)	3780152
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
658	1.4	0.0	0.0	chr7	149635687	149635758	(9710215)	+	tRNA-Cys-TGY	tRNA	1	72	(3)	3780964
12	20.0	5.3	5.0	chr7	149873609	149873665	(9472308)	+	(CGGCG)n	Simple_repeat	1	60	(0)	3781258
62	12.9	0.0	0.0	chr7	150209207	150209307	(9136666)	+	(AGAGAG)n	Simple_repeat	1	101	(0)	3781701
270	20.9	0.9	5.4	chr7	150209310	150209420	(9136553)	+	L1M4a1	LINE/L1	1452	1557	(1022)	3781702
1622	19.0	0.0	2.2	chr7	150360554	150360821	(8985152)	C	AluJr	SINE/Alu	(25)	287	26	3781943
912	21.0	0.8	11.4	chr7	150360822	150360935	(8985038)	C	MER67C	LTR/ERV1	(461)	250	156	3781941
1743	16.2	3.2	1.1	chr7	150360936	150361213	(8984760)	+	AluJr	SINE/Alu	2	285	(27)	3781944
48	0.0	0.0	0.0	chr7	150392546	150392586	(8953387)	+	(TC)n	Simple_repeat	1	41	(0)	3781995
1591	16.2	0.4	0.4	chr7	150392587	150392833	(8953140)	C	AluJr	SINE/Alu	(65)	247	1	3781996
33	3.1	0.0	0.0	chr7	150962621	150962653	(8383320)	+	(GA)n	Simple_repeat	1	33	(0)	3782711
21	7.6	0.0	0.0	chr7	151252414	151252441	(8093532)	+	(TG)n	Simple_repeat	1	28	(0)	3783108
42	15.3	1.4	0.0	chr7	151252441	151252513	(8093460)	+	GA-rich	Low_complexity	1	74	(0)	3783109
18	29.5	0.0	5.5	chr7	151519551	151519641	(7826332)	+	(GCGGCG)n	Simple_repeat	1	91	(0)	3783577
2426	20.3	3.9	7.0	chr7	151969393	151969798	(7376175)	C	LTR71B	LTR/ERV1	(0)	610	199	3784341
2482	6.8	0.0	1.3	chr7	151969799	151970109	(7375864)	C	AluY	SINE/Alu	(4)	307	1	3784342
1691	22.2	6.6	2.5	chr7	151992301	151992747	(7353226)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3784384
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
41640	5.8	0.5	1.4	chr7	152030596	152035827	(7310146)	C	HERV9NC-int	LTR/ERV1	(951)	5167	104	3784472
863	16.0	0.0	0.0	chr7	152296858	152296982	(7048991)	+	AluSz	SINE/Alu	1	125	(187)	3784830
83	8.7	1.6	0.0	chr7	152296983	152297106	(7048867)	+	(GAAA)n	Simple_repeat	1	126	(0)	3784831
5219	22.7	7.2	2.3	chr7	152297138	152299037	(7046936)	+	L1MEc	LINE/L1	142	2206	(4209)	3784829
765	21.2	11.5	2.4	chr7	152383638	152383850	(6962123)	+	MIR	SINE/MIR	17	251	(11)	3784989
13	24.6	2.3	0.0	chr7	152436347	152436389	(6909584)	+	(GCTC)n	Simple_repeat	1	44	(0)	3785121
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
844	22.3	11.7	0.0	chr7	152674851	152675047	(6670926)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	3785717
1857	9.2	2.4	0.4	chr7	152676604	152676852	(6669121)	+	AluSz	SINE/Alu	50	303	(9)	3785719
68	24.8	3.9	1.6	chr7	152785377	152785542	(6560431)	+	GA-rich	Low_complexity	1	169	(0)	3785993
57	1.4	8.1	0.0	chr7	153321004	153321077	(6024896)	+	(CT)n	Simple_repeat	1	80	(0)	3786788
53	5.3	0.0	0.0	chr7	153450832	153450890	(5895083)	+	(CT)n	Simple_repeat	1	59	(0)	3786940
51	5.5	0.0	0.0	chr7	153450954	153451010	(5894963)	+	(CT)n	Simple_repeat	1	57	(0)	3786940
54	7.0	1.3	1.3	chr7	153451074	153451150	(5894823)	+	(CT)n	Simple_repeat	1	78	(0)	3786940
1652	29.4	11.1	3.0	chr7	153451223	153452068	(5893905)	C	L2	LINE/L2	(859)	2560	1637	3786941
611	23.5	36.6	3.0	chr7	155037644	155037860	(4308113)	C	HAL1	LINE/L1	(428)	2079	1803	3789081
65	3.2	0.0	0.0	chr7	155037882	155037945	(4308028)	+	(TC)n	Simple_repeat	1	64	(0)	3789083
1580	17.6	0.0	1.5	chr7	155037946	155038206	(4307767)	C	AluJr	SINE/Alu	(55)	257	1	3789084
940	20.1	9.0	12.2	chr7	155190200	155190567	(4155406)	+	MLT1B	LTR/ERVL-MaLR	1	355	(35)	3789326
39	24.6	5.9	0.0	chr7	155224195	155224330	(4121643)	+	GA-rich	Low_complexity	1	144	(0)	3789378
24	27.5	3.5	5.4	chr7	155227183	155227325	(4118648)	+	A-rich	Low_complexity	1	148	(0)	3789380
57	12.4	3.1	0.0	chr7	155509462	155509558	(3836415)	+	GA-rich	Low_complexity	1	100	(0)	3789721
1701	16.4	3.6	0.4	chr7	155735423	155735691	(3610282)	+	AluJo	SINE/Alu	1	278	(34)	3790049
57	3.5	0.0	0.0	chr7	155735692	155735749	(3610224)	+	(TC)n	Simple_repeat	1	58	(0)	3790050
16	37.6	0.0	0.0	chr7	155812205	155812282	(3533691)	+	(CTCT)n	Simple_repeat	1	78	(0)	3790115
102	11.4	4.0	0.5	chr7	156539622	156539798	(2806175)	+	(CT)n	Simple_repeat	1	184	(0)	3791023
965	18.4	0.6	2.4	chr7	156556067	156556234	(2789739)	+	AluJo	SINE/Alu	137	301	(11)	3791041
44	10.3	1.3	2.5	chr7	156556235	156556308	(2789665)	+	(GA)n	Simple_repeat	2	74	(0)	3791042
2197	10.9	0.3	0.0	chr7	156581787	156582079	(2763894)	C	AluSp	SINE/Alu	(18)	295	2	3791080
100	2.0	1.0	1.0	chr7	156582102	156582203	(2763770)	+	(AG)n	Simple_repeat	1	103	(0)	3791081
14	32.0	0.0	0.0	chr7	156892384	156892437	(2453536)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3791498
48	29.4	2.7	4.5	chr7	156892630	156892889	(2453084)	+	G-rich	Low_complexity	1	267	(0)	3791499
14	0.0	0.0	7.7	chr7	157007724	157007749	(2338224)	+	(AAAG)n	Simple_repeat	1	26	(0)	3791704
1687	15.2	0.7	5.4	chr7	157047500	157047795	(2298178)	+	AluJr	SINE/Alu	1	282	(30)	3791758
22	0.0	0.0	0.0	chr7	157047796	157047819	(2298154)	+	(TC)n	Simple_repeat	1	24	(0)	3791759
109	4.5	0.0	0.0	chr7	157131049	157131163	(2214810)	+	(TC)n	Simple_repeat	1	115	(0)	3791911
31	0.0	0.0	0.0	chr7	157211168	157211194	(2134779)	+	(GA)n	Simple_repeat	1	27	(0)	3792061
31	18.3	0.0	0.0	chr7	157224776	157224837	(2121136)	+	(ACTC)n	Simple_repeat	1	62	(0)	3792087
2357	7.4	0.0	1.0	chr7	157305307	157305603	(2040370)	+	AluSq2	SINE/Alu	1	294	(19)	3792241
36	2.9	0.0	0.0	chr7	157305604	157305638	(2040335)	+	(AG)n	Simple_repeat	1	35	(0)	3792242
2348	6.8	2.1	1.8	chr7	157305639	157305790	(2040183)	C	MER4E1	LTR/ERV1	(194)	572	426	3792240
78	7.3	0.0	0.0	chr7	157461585	157461687	(1884286)	+	(TC)n	Simple_repeat	1	103	(0)	3792500
138	21.4	2.9	0.6	chr7	157524770	157525113	(1820860)	+	GA-rich	Low_complexity	1	352	(0)	3792564
770	21.6	6.0	4.8	chr7	158589467	158589695	(756278)	+	MSTB	LTR/ERVL-MaLR	1	232	(194)	3793402
5048	23.1	13.4	8.2	chr7	158614581	158616332	(729641)	+	L1MC5	LINE/L1	7319	9209	(95)	3793441
1424	26.1	10.1	2.9	chr7	158616390	158617346	(728627)	+	HAL1	LINE/L1	425	1797	(668)	3793440
3785	24.7	7.4	8.7	chr7	159238025	159240180	(105793)	+	L1ME1	LINE/L1	2825	4941	(2000)	3794226
164	24.7	1.0	0.2	chr8	616585	616983	(144521653)	+	GA-rich	Low_complexity	1	403	(0)	3795007
16	0.0	0.0	0.0	chr8	686765	686782	(144451854)	+	(AG)n	Simple_repeat	1	18	(0)	3795079
17	8.8	0.0	0.0	chr8	733527	733550	(144405086)	+	(AC)n	Simple_repeat	1	24	(0)	3795119
55	0.0	0.0	0.0	chr8	733551	733597	(144405039)	+	(AG)n	Simple_repeat	1	47	(0)	3795120
19	10.2	7.1	0.0	chr8	737677	737718	(144400918)	+	(CGGA)n	Simple_repeat	1	45	(0)	3795128
43	2.5	0.0	0.0	chr8	1624846	1624886	(143513750)	+	(TC)n	Simple_repeat	1	41	(0)	3795904
1359	16.7	10.9	16.1	chr8	1815895	1816160	(143322476)	C	MSTA1	LTR/ERVL-MaLR	(209)	256	2	3796139
18	30.2	2.1	3.1	chr8	1823735	1823828	(143314808)	+	G-rich	Low_complexity	1	96	(0)	3796153
16	31.0	0.0	1.9	chr8	2565327	2565380	(142573256)	+	(TA)n	Simple_repeat	1	54	(0)	3796976
62	1.8	0.0	0.0	chr8	2565385	2565441	(142573195)	+	(GA)n	Simple_repeat	1	57	(0)	3796977
3498	18.2	1.7	0.6	chr8	2565493	2566187	(142572449)	C	MER50	LTR/ERV1	(23)	711	9	3796978
85	28.1	1.1	2.2	chr8	6282531	6282802	(138855834)	+	GA-rich	Low_complexity	1	275	(0)	3801789
41	9.2	0.0	0.0	chr8	6486263	6486320	(138652316)	+	(TC)n	Simple_repeat	1	58	(0)	3802137
1931	16.7	2.6	7.8	chr8	6623153	6623276	(138515360)	C	MLT1B	LTR/ERVL-MaLR	(262)	128	1	3802340
32	13.2	3.5	0.0	chr8	6623340	6623397	(138515239)	+	(CT)n	Simple_repeat	1	60	(0)	3802342
2065	16.9	5.3	1.0	chr8	8297516	8297928	(136840708)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3804481
772	23.2	5.5	2.8	chr8	8299514	8299726	(136838910)	+	L1ME1	LINE/L1	5452	5670	(494)	3804484
14044	13.2	1.6	3.2	chr8	8299732	8301988	(136836648)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	200	3804485
33	3.1	0.0	0.0	chr8	8337471	8337503	(136801133)	+	(AG)n	Simple_repeat	1	33	(0)	3804554
379	36.3	5.1	0.6	chr8	8407566	8407734	(136730902)	C	MIRb	SINE/MIR	(58)	210	34	3804657
36	0.0	0.0	0.0	chr8	8477161	8477191	(136661445)	+	(TC)n	Simple_repeat	1	31	(0)	3804782
2253	10.4	0.0	0.3	chr8	8477192	8477480	(136661156)	C	AluSq2	SINE/Alu	(25)	288	1	3804783
24	0.0	3.1	0.0	chr8	8542829	8542854	(136595782)	+	(GT)n	Simple_repeat	1	26	(0)	3804914
72	1.5	0.0	0.0	chr8	8542855	8542920	(136595716)	+	(GA)n	Simple_repeat	1	66	(0)	3804915
2445	23.3	7.4	0.9	chr8	8543045	8543686	(136594950)	C	L1MC4	LINE/L1	(142)	7900	7214	3804916
41	0.0	2.3	2.3	chr8	8648762	8648804	(136489832)	+	(AG)n	Simple_repeat	1	44	(0)	3805078
51	0.0	0.0	0.0	chr8	9239072	9239115	(135899521)	+	(TC)n	Simple_repeat	1	44	(0)	3806160
206	29.0	1.9	6.0	chr8	9771124	9772126	(135366510)	+	GA-rich	Low_complexity	1	1022	(0)	3807019
40	2.5	0.0	2.3	chr8	9904220	9904262	(135234374)	+	(AG)n	Simple_repeat	1	43	(0)	3807240
55	0.0	0.0	0.0	chr8	10316528	10316574	(134822062)	+	(CT)n	Simple_repeat	1	47	(0)	3807871
15	11.0	4.4	4.3	chr8	10316575	10316615	(134822021)	+	(TCCTCC)n	Simple_repeat	4	44	(0)	3807872
1707	13.2	5.2	1.2	chr8	10711596	10711853	(134426783)	+	AluJb	SINE/Alu	9	277	(35)	3808521
44	4.1	2.0	0.0	chr8	10711870	10711919	(134426717)	+	(TC)n	Simple_repeat	1	51	(0)	3808522
2823	6.0	2.8	1.0	chr8	10711920	10712308	(134426328)	C	MLT2A1	LTR/ERVL	(48)	396	1	3808523
35	21.4	2.5	4.9	chr8	11201049	11201097	(133937539)	+	(GCG)n	Simple_repeat	31	122	(0)	3809241
26	17.8	3.6	4.7	chr8	11201192	11201274	(133937362)	+	(CGC)n	Simple_repeat	1	86	(0)	3809243
16	32.6	0.0	0.0	chr8	11201368	11201422	(133937214)	+	G-rich	Low_complexity	1	55	(0)	3809244
1678	13.0	4.0	0.7	chr8	11693185	11693453	(133445183)	+	AluJb	SINE/Alu	2	279	(33)	3810012
46	15.4	2.3	0.0	chr8	11693455	11693517	(133445119)	+	GA-rich	Low_complexity	1	65	(0)	3810013
49	2.2	0.0	0.0	chr8	11693518	11693563	(133445073)	+	(CA)n	Simple_repeat	1	46	(0)	3810014
46	15.4	2.3	0.0	chr8	11693564	11693587	(133445049)	+	GA-rich	Low_complexity	66	89	(0)	3810015
289	37.0	1.7	6.5	chr8	11693588	11693772	(133444864)	C	MIR3	SINE/MIR	(29)	179	4	3810016
326	25.0	1.2	2.3	chr8	11736324	11736409	(133402227)	C	MIR3	SINE/MIR	(34)	174	90	3810076
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
13	25.3	2.0	2.0	chr8	11808347	11808395	(133330241)	+	G-rich	Low_complexity	1	50	(0)	3810190
3026	14.0	0.9	0.0	chr8	12565087	12565544	(132573092)	+	HERVK-int	LTR/ERVK	5157	5618	(1918)	3811209
43	30.3	2.7	2.3	chr8	12565560	12565739	(132572897)	+	GA-rich	Low_complexity	1	180	(0)	3811210
1604	17.2	2.0	3.0	chr8	12758407	12758703	(132379933)	C	AluJr	SINE/Alu	(18)	294	1	3811511
44	0.0	0.0	0.0	chr8	12758769	12758806	(132379830)	+	(CT)n	Simple_repeat	1	38	(0)	3811512
742	30.3	11.8	5.0	chr8	12776033	12777569	(132361067)	+	L1M6	LINE/L1	729	2383	(4113)	3811548
41	0.0	0.0	0.0	chr8	13042707	13042741	(132095895)	+	(AG)n	Simple_repeat	1	35	(0)	3812039
2173	10.7	1.4	0.0	chr8	13042742	13043013	(132095623)	C	AluSg	SINE/Alu	(34)	276	1	3812040
2254	11.6	0.0	0.0	chr8	13114080	13114381	(132024255)	+	AluSx	SINE/Alu	1	302	(10)	3812164
1205	19.8	15.1	0.0	chr8	13143463	13143710	(131994926)	C	AluJr	SINE/Alu	(19)	293	2	3812211
817	30.5	7.0	5.7	chr8	13143711	13143813	(131994823)	+	MLT1G	LTR/ERVL-MaLR	181	275	(316)	3812210
47	0.0	0.0	0.0	chr8	13143814	13143853	(131994783)	+	(GA)n	Simple_repeat	1	40	(0)	3812212
817	30.5	7.1	6.0	chr8	13143854	13143990	(131994646)	+	MLT1G	LTR/ERVL-MaLR	276	410	(145)	3812210
2704	16.8	4.2	6.0	chr8	13143991	13144483	(131994153)	+	MLT2B3	LTR/ERVL	1	502	(52)	3812213
12	21.1	2.9	0.0	chr8	13229606	13229639	(131908997)	+	GA-rich	Low_complexity	1	35	(0)	3812338
40	2.4	2.4	0.0	chr8	13229640	13229681	(131908955)	+	(AG)n	Simple_repeat	1	43	(0)	3812339
244	30.2	5.8	3.7	chr8	13532434	13532567	(131606069)	C	MIRb	SINE/MIR	(78)	190	54	3812820
31	3.3	0.0	0.0	chr8	13532568	13532598	(131606038)	+	(CT)n	Simple_repeat	1	31	(0)	3812821
662	18.7	2.3	3.7	chr8	13532615	13532748	(131605888)	C	AluJr	SINE/Alu	(39)	273	142	3812822
53	7.8	0.0	0.0	chr8	15369630	15369697	(129768939)	+	(CT)n	Simple_repeat	1	68	(0)	3815259
8016	14.2	3.2	0.9	chr8	15571801	15573133	(129565503)	C	Tigger1	DNA/TcMar-Tigger	(1054)	1364	1	3815600
47	2.3	0.0	0.0	chr8	15573159	15573203	(129565433)	+	(TC)n	Simple_repeat	1	45	(0)	3815601
24	0.0	0.0	0.0	chr8	15573204	15573230	(129565406)	+	(AT)n	Simple_repeat	1	27	(0)	3815602
37	11.8	3.8	1.2	chr8	16571454	16571511	(128567125)	+	(TCTT)n	Simple_repeat	1	60	(0)	3816939
64	1.7	0.0	0.0	chr8	16571512	16571570	(128567066)	+	(TC)n	Simple_repeat	1	59	(0)	3816940
37	11.8	3.8	1.2	chr8	16571571	16571584	(128567052)	+	(TCTT)n	Simple_repeat	1	14	(0)	3816941
1955	12.7	0.4	0.0	chr8	16571585	16571843	(128566793)	C	AluSx1	SINE/Alu	(52)	260	1	3816942
1949	23.0	8.0	1.9	chr8	16799116	16799357	(128339279)	+	LTR40A1	LTR/ERVL	1	257	(327)	3817268
41	0.0	0.0	0.0	chr8	16799358	16799392	(128339244)	+	(TC)n	Simple_repeat	1	35	(0)	3817269
1949	23.0	8.0	1.9	chr8	16799393	16799627	(128339009)	+	LTR40A1	LTR/ERVL	258	510	(74)	3817268
16	13.1	0.0	0.0	chr8	17027213	17027237	(128111399)	+	(C)n	Simple_repeat	1	25	(0)	3817596
23	19.1	2.8	4.1	chr8	17158782	17158852	(127979784)	+	(CCTG)n	Simple_repeat	1	73	(0)	3817790
1014	15.1	0.0	0.7	chr8	17496180	17496331	(127642305)	+	AluJb	SINE/Alu	142	292	(20)	3818282
37	9.6	2.9	1.4	chr8	17499322	17499391	(127639245)	+	(TC)n	Simple_repeat	1	72	(0)	3818286
19	17.1	1.7	5.1	chr8	17801486	17801543	(127337093)	+	(CGCTCC)n	Simple_repeat	1	59	(0)	3818737
297	28.4	1.1	0.9	chr8	18954725	18954844	(126183792)	C	MER5A1	DNA/hAT-Charlie	(68)	121	1	3820401
330	26.2	4.4	3.7	chr8	18955013	18955147	(126183489)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	276	3820402
288	24.5	7.8	0.0	chr8	18992300	18992393	(126146243)	+	L2	LINE/L2	2795	2896	(523)	3820469
273	14.8	12.9	0.0	chr8	18992395	18992448	(126146188)	+	L2a	LINE/L2	3365	3426	(0)	3820470
12	16.3	2.8	2.7	chr8	19013517	19013552	(126125084)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	3820499
14	8.1	0.0	3.6	chr8	19230422	19230449	(125908187)	+	(CTCTT)n	Simple_repeat	1	28	(0)	3820874
58	7.3	0.0	0.0	chr8	20149573	20149644	(124988992)	+	(TC)n	Simple_repeat	1	72	(0)	3822348
40	31.2	1.6	0.0	chr8	20311608	20311731	(124826905)	+	(TCTC)n	Simple_repeat	1	126	(0)	3822620
1540	12.4	14.6	0.0	chr8	20311740	20311973	(124826663)	C	AluJr	SINE/Alu	(38)	274	1	3822621
55	0.0	0.0	0.0	chr8	20513020	20513066	(124625570)	+	(AG)n	Simple_repeat	1	47	(0)	3822991
281	26.9	10.8	0.0	chr8	20513127	20513234	(124625402)	+	MIR3	SINE/MIR	11	131	(77)	3822992
108	13.8	2.9	0.9	chr8	21116204	21116409	(124022227)	+	A-rich	Low_complexity	1	212	(0)	3823929
1959	15.6	0.7	0.0	chr8	21532924	21533211	(123605425)	+	AluSz6	SINE/Alu	1	290	(22)	3824588
35	8.3	0.0	0.0	chr8	21533212	21533263	(123605373)	+	(GAGA)n	Simple_repeat	1	52	(0)	3824589
17	16.9	0.0	0.0	chr8	21533254	21533287	(123605349)	+	GA-rich	Low_complexity	1	34	(0)	3824590
313	24.8	10.5	1.9	chr8	21533288	21533443	(123605193)	+	L1M5	LINE/L1	3030	3200	(2946)	3824591
49	17.4	4.1	1.6	chr8	21788807	21788927	(123349709)	+	(TCTC)n	Simple_repeat	1	126	(0)	3825006
21	16.9	0.0	6.6	chr8	21788998	21789026	(123349610)	+	G-rich	Low_complexity	1	44	(42)	3825007
14	15.3	2.6	2.6	chr8	21789027	21789064	(123349572)	+	(GGCGG)n	Simple_repeat	1	39	(0)	3825008
246	24.1	5.7	3.5	chr8	21818782	21818867	(123319769)	C	MLT1J2	LTR/ERVL-MaLR	(294)	154	67	3825073
20	19.5	0.0	2.0	chr8	21818889	21818957	(123319679)	+	(TTCC)n	Simple_repeat	1	67	(0)	3825074
31	9.8	0.0	0.0	chr8	21818960	21819004	(123319632)	+	(TC)n	Simple_repeat	1	45	(0)	3825075
30	0.0	0.0	0.0	chr8	21819035	21819062	(123319574)	+	(CAAA)n	Simple_repeat	1	28	(0)	3825076
2160	11.3	0.7	0.0	chr8	21819064	21819355	(123319281)	+	AluSx1	SINE/Alu	1	294	(18)	3825077
154	17.4	1.7	3.4	chr8	21887924	21888273	(123250363)	+	A-rich	Low_complexity	1	356	(0)	3825224
480	28.5	8.3	0.6	chr8	21888292	21888457	(123250179)	+	MIR3	SINE/MIR	27	206	(2)	3825225
321	29.8	4.0	5.5	chr8	21993588	21993715	(123144921)	+	MIRc	SINE/MIR	25	150	(118)	3825399
37	2.8	0.0	0.0	chr8	21993916	21993951	(123144685)	+	(TC)n	Simple_repeat	1	36	(0)	3825400
16	14.0	4.8	2.3	chr8	21993954	21993995	(123144641)	+	(CCTC)n	Simple_repeat	1	44	(0)	3825401
36	8.7	0.0	0.0	chr8	22060384	22060432	(123078204)	+	(CT)n	Simple_repeat	1	49	(0)	3825504
18	21.0	0.0	0.0	chr8	22060438	22060472	(123078164)	+	(CA)n	Simple_repeat	1	35	(0)	3825505
24	30.6	1.9	2.8	chr8	22164682	22164786	(122973850)	+	GA-rich	Low_complexity	1	107	(0)	3825671
29	31.5	1.6	5.8	chr8	22165128	22165313	(122973323)	+	G-rich	Low_complexity	1	189	(0)	3825674
18	8.7	0.0	0.0	chr8	22210362	22210386	(122928250)	+	(T)n	Simple_repeat	1	25	(0)	3825762
14	15.3	5.4	0.0	chr8	22210387	22210396	(122928240)	+	(TCTTTT)n	Simple_repeat	3	39	(0)	3825763
34	5.6	0.0	0.0	chr8	22210432	22210469	(122928167)	+	(TC)n	Simple_repeat	1	38	(0)	3825764
13	19.5	0.0	0.0	chr8	22210470	22210499	(122928137)	+	(ACACAC)n	Simple_repeat	6	35	(0)	3825765
16	0.0	4.3	0.0	chr8	22392777	22392799	(122745837)	+	(CTCC)n	Simple_repeat	1	24	(0)	3826131
231	14.6	2.0	4.0	chr8	22392933	22392982	(122745654)	+	L2b	LINE/L2	3322	3370	(5)	3826132
165	5.3	1.8	0.0	chr8	22396386	22396602	(122742034)	+	(AG)n	Simple_repeat	1	221	(0)	3826140
498	33.5	6.4	1.8	chr8	22400912	22401136	(122737500)	C	MIRb	SINE/MIR	(2)	266	31	3826143
2008	12.7	0.6	6.7	chr8	22423626	22423766	(122714870)	C	AluSx	SINE/Alu	(186)	126	1	3826189
30	0.0	0.0	0.0	chr8	22423787	22423812	(122714824)	+	(TC)n	Simple_repeat	1	26	(0)	3826191
970	18.7	12.8	4.0	chr8	22423888	22424085	(122714551)	C	AluJo	SINE/Alu	(94)	218	1	3826192
40	19.7	3.3	1.1	chr8	22432383	22432474	(122706162)	+	(TC)n	Simple_repeat	1	95	(0)	3826212
1813	16.4	0.0	5.9	chr8	22432475	22432645	(122705991)	C	AluJo	SINE/Alu	(8)	304	140	3826213
101	13.9	3.3	2.3	chr8	22525377	22525582	(122613054)	+	(TTCT)n	Simple_repeat	1	208	(0)	3826426
1741	17.0	0.0	1.4	chr8	22525583	22525859	(122612777)	C	AluJr	SINE/Alu	(39)	273	1	3826427
15	25.6	0.0	4.9	chr8	22599658	22599718	(122538918)	+	G-rich	Low_complexity	1	61	(0)	3826528
44	0.0	0.0	0.0	chr8	22810878	22810915	(122327721)	+	(GA)n	Simple_repeat	1	38	(0)	3826849
34	0.0	0.0	0.0	chr8	22986141	22986169	(122152467)	+	(TC)n	Simple_repeat	1	29	(0)	3827166
331	35.6	1.7	0.0	chr8	23287816	23287930	(121850706)	+	MIRb	SINE/MIR	23	139	(129)	3827672
228	29.7	7.2	5.9	chr8	23452145	23452280	(121686356)	+	L2a	LINE/L2	3249	3386	(40)	3827930
297	26.6	10.6	6.8	chr8	23452331	23452451	(121686185)	+	L2b	LINE/L2	2791	2925	(494)	3827933
954	18.6	6.8	0.0	chr8	23452452	23452644	(121685992)	C	MER3	DNA/hAT-Charlie	(2)	207	1	3827934
120	29.5	2.5	0.0	chr8	23746195	23746553	(121392083)	+	(TCTC)n	Simple_repeat	1	368	(0)	3828449
2185	12.8	1.7	0.3	chr8	25837891	25838180	(119300456)	+	AluSz6	SINE/Alu	4	297	(15)	3831713
62	0.0	0.0	0.0	chr8	25838189	25838241	(119300395)	+	(CT)n	Simple_repeat	1	53	(0)	3831714
1535	28.1	10.7	4.2	chr8	25838242	25839051	(119299585)	+	L1M7	LINE/L1	485	1409	(4809)	3831712
1637	16.5	0.4	1.1	chr8	26005580	26005846	(119132790)	+	AluJb	SINE/Alu	34	298	(14)	3831935
2038	13.2	3.9	0.3	chr8	26141128	26141423	(118997213)	+	AluSz6	SINE/Alu	1	307	(5)	3832163
16	9.3	0.0	0.0	chr8	26141424	26141446	(118997190)	+	(GA)n	Simple_repeat	1	23	(0)	3832164
304	34.6	8.4	1.8	chr8	26512089	26512309	(118626327)	+	MIRc	SINE/MIR	19	255	(13)	3832882
25	23.1	3.3	3.2	chr8	26513914	26514004	(118624632)	+	(CCCTC)n	Simple_repeat	1	94	(0)	3832884
35	0.0	5.4	0.0	chr8	26577982	26578018	(118560618)	+	(TC)n	Simple_repeat	1	39	(0)	3832986
17	3.8	3.7	0.0	chr8	26578158	26578184	(118560452)	+	(AACAA)n	Simple_repeat	1	28	(0)	3832987
53	3.8	0.0	0.0	chr8	26691513	26691566	(118447070)	+	(CT)n	Simple_repeat	1	54	(0)	3833183
24	3.6	0.0	0.0	chr8	26691567	26691595	(118447041)	+	(GT)n	Simple_repeat	1	29	(0)	3833184
1425	22.4	3.5	7.4	chr8	27404815	27405021	(117733615)	+	MLT1A	LTR/ERVL-MaLR	1	188	(186)	3834333
43	2.1	4.2	0.0	chr8	27405022	27405069	(117733567)	+	(CT)n	Simple_repeat	1	50	(0)	3834334
1425	22.4	3.5	7.4	chr8	27405070	27405251	(117733385)	+	MLT1A	LTR/ERVL-MaLR	189	374	(0)	3834333
2452	8.7	0.3	0.3	chr8	27628315	27628624	(117510012)	+	AluY	SINE/Alu	1	310	(1)	3834696
41	9.5	1.4	2.7	chr8	27628625	27628697	(117509939)	+	(GAAA)n	Simple_repeat	1	74	(0)	3834697
233	29.6	0.0	0.0	chr8	27932283	27932336	(117206300)	+	MER45R	DNA/hAT-Tip100	1528	1581	(0)	3835233
1689	21.0	4.9	1.6	chr8	27932417	27932623	(117206013)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	176	3835234
189	28.6	2.8	1.0	chr8	28012846	28013449	(117125187)	+	GA-rich	Low_complexity	1	621	(0)	3835387
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
18	0.0	0.0	0.0	chr8	28701618	28701640	(116436996)	+	(GGC)n	Simple_repeat	1	23	(0)	3836722
649	28.2	6.1	5.4	chr8	28709077	28709335	(116429301)	+	MIR	SINE/MIR	1	261	(1)	3836733
13	15.8	2.7	2.6	chr8	29262702	29262738	(115875898)	+	(GGCGCA)n	Simple_repeat	1	38	(0)	3837622
14	8.5	10.3	2.3	chr8	29348857	29348895	(115789741)	+	(GCG)n	Simple_repeat	1	43	(0)	3837753
2253	12.0	8.0	6.2	chr8	29747935	29748353	(115390283)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	3838451
255	21.1	0.0	0.0	chr8	29993478	29993529	(115145107)	+	LTR33B	LTR/ERVL	446	497	(6)	3838826
390	27.3	23.8	3.9	chr8	29993537	29993657	(115144979)	+	L2a	LINE/L2	2421	2563	(856)	3838827
48	4.2	0.0	0.0	chr8	29993658	29993707	(115144929)	+	(CT)n	Simple_repeat	1	50	(0)	3838828
606	27.2	18.8	2.0	chr8	29993708	29994369	(115144267)	+	L2a	LINE/L2	2564	3387	(39)	3838827
12	14.4	0.0	0.0	chr8	30095456	30095479	(115043157)	+	(GCC)n	Simple_repeat	1	24	(0)	3839029
18	14.3	0.0	2.9	chr8	30110367	30110400	(115028236)	+	(GT)n	Simple_repeat	1	34	(0)	3839058
26	0.0	0.0	9.3	chr8	30549727	30549769	(114588867)	+	(TTTC)n	Simple_repeat	1	43	(0)	3839963
51	1.9	3.6	0.0	chr8	30549773	30549827	(114588809)	+	(TC)n	Simple_repeat	1	57	(0)	3839964
2410	7.6	0.0	0.0	chr8	30549841	30550130	(114588506)	C	AluY	SINE/Alu	(2)	309	20	3839965
13	20.3	0.0	4.7	chr8	30658004	30658046	(114480590)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	3840123
26	14.5	0.0	0.0	chr8	30658138	30658183	(114480453)	+	(GGC)n	Simple_repeat	1	46	(0)	3840124
495	13.1	6.7	13.3	chr8	30664085	30664234	(114474402)	C	ERVL-B4-int	LTR/ERVL	(224)	5490	5349	3840139
1850	11.4	0.7	0.0	chr8	30664256	30664535	(114474101)	C	ERVL-E-int	LTR/ERVL	(3399)	2315	2034	3840144
11	17.2	7.7	0.0	chr8	30727772	30727810	(114410826)	+	(CGCGCGC)n	Simple_repeat	1	42	(0)	3840308
303	29.9	15.9	6.7	chr8	30812448	30812759	(114325877)	+	L1M4b	LINE/L1	207	552	(6315)	3840504
254	32.4	1.3	1.3	chr8	30908619	30908693	(114229943)	+	MIR3	SINE/MIR	9	83	(125)	3840663
13	18.5	2.6	2.5	chr8	33484703	33484741	(111653895)	+	G-rich	Low_complexity	1	40	(0)	3844585
85	15.1	0.0	0.0	chr8	35380103	35380248	(109758388)	+	GA-rich	Low_complexity	1	146	(0)	3847476
659	21.8	4.6	4.1	chr8	35380251	35380422	(109758214)	C	MLT1A	LTR/ERVL-MaLR	(199)	175	3	3847475
1876	11.0	11.6	0.9	chr8	36851201	36851373	(108287263)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	3849491
43	4.5	0.0	0.0	chr8	36851374	36851419	(108287217)	+	(TC)n	Simple_repeat	1	46	(0)	3849492
289	32.0	3.7	1.0	chr8	37007162	37007265	(108131371)	C	MIR	SINE/MIR	(152)	110	4	3849695
49	2.2	0.0	0.0	chr8	37007380	37007425	(108131211)	+	(CT)n	Simple_repeat	1	46	(0)	3849696
36	10.7	1.6	3.1	chr8	37097465	37097528	(108041108)	+	GA-rich	Low_complexity	1	65	(0)	3849827
317	35.7	9.6	2.0	chr8	37155554	37155850	(107982786)	+	Tigger15a	DNA/TcMar-Tigger	365	686	(29)	3849913
30	11.3	0.0	0.0	chr8	37155859	37155906	(107982730)	+	(GT)n	Simple_repeat	1	48	(0)	3849914
29	0.0	0.0	0.0	chr8	37155908	37155932	(107982704)	+	(AG)n	Simple_repeat	1	25	(0)	3849915
18	32.6	1.1	4.2	chr8	37179806	37179900	(107958736)	+	(CTCCCCC)n	Simple_repeat	1	96	(0)	3849946
41	8.0	0.0	0.0	chr8	37179921	37179973	(107958663)	+	(CT)n	Simple_repeat	1	53	(0)	3849947
48	0.0	0.0	0.0	chr8	37232992	37233032	(107905604)	+	(TC)n	Simple_repeat	1	41	(0)	3850026
3901	17.4	7.9	0.5	chr8	37286356	37286620	(107852016)	+	MER54B	LTR/ERVL	1	289	(504)	3850086
62	4.7	0.0	0.0	chr8	37286621	37286686	(107851950)	+	(CT)n	Simple_repeat	1	66	(0)	3850087
3901	17.4	7.9	0.5	chr8	37286687	37287154	(107851482)	+	MER54B	LTR/ERVL	290	792	(1)	3850086
282	30.2	2.0	0.0	chr8	37328584	37328679	(107809957)	C	MIR3	SINE/MIR	(60)	148	51	3850149
2677	22.1	1.6	3.0	chr8	37336735	37337294	(107801342)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	3850159
204	21.6	3.0	0.4	chr8	37356310	37356321	(107782315)	+	(ATGG)n	Simple_repeat	4	14	(0)	3850187
4491	10.4	0.8	0.5	chr8	37356322	37356931	(107781705)	C	LTR9	LTR/ERV1	(0)	612	1	3850188
1756	17.3	1.3	2.3	chr8	37379957	37380263	(107758373)	+	AluJo	SINE/Alu	1	304	(8)	3850225
382	27.2	2.8	3.1	chr8	37399448	37399580	(107739056)	+	LTR33A	LTR/ERVL	54	192	(339)	3850255
43	4.2	2.0	0.0	chr8	37399581	37399629	(107739007)	+	(TC)n	Simple_repeat	1	50	(0)	3850256
316	32.8	5.8	4.4	chr8	37399630	37399649	(107738987)	+	LTR33A	LTR/ERVL	193	210	(321)	3850255
1079	16.2	0.0	0.7	chr8	37399679	37399832	(107738804)	C	AluJb	SINE/Alu	(16)	296	144	3850257
16	17.5	0.0	0.0	chr8	37452631	37452663	(107685973)	+	GA-rich	Low_complexity	1	33	(0)	3850344
19	7.1	3.1	3.0	chr8	37453228	37453259	(107685377)	+	(GA)n	Simple_repeat	1	33	(0)	3850345
180	31.3	0.7	2.2	chr8	37506251	37506847	(107631789)	+	GA-rich	Low_complexity	1	601	(0)	3850429
27	29.4	2.8	1.8	chr8	37560725	37560831	(107577805)	+	(TC)n	Simple_repeat	1	110	(0)	3850518
24	11.4	8.2	0.0	chr8	37560880	37560928	(107577708)	+	(TC)n	Simple_repeat	1	53	(0)	3850518
19	20.8	2.3	0.0	chr8	37594458	37594501	(107544135)	+	GA-rich	Low_complexity	1	45	(0)	3850593
430	27.4	18.1	3.2	chr8	37597094	37597312	(107541324)	C	MIR	SINE/MIR	(2)	260	2	3850600
14	28.2	2.0	0.0	chr8	37599173	37599223	(107539413)	+	(GTT)n	Simple_repeat	1	52	(0)	3850603
38	11.2	0.0	0.0	chr8	37606480	37606539	(107532097)	+	(GAGA)n	Simple_repeat	1	60	(0)	3850620
243	37.6	6.2	3.2	chr8	37606540	37606726	(107531910)	C	L2c	LINE/L2	(452)	2967	2775	3850618
2077	12.1	1.4	1.4	chr8	37665082	37665378	(107473258)	+	AluSx1	SINE/Alu	1	297	(15)	3850740
37	14.9	0.0	0.0	chr8	37665380	37665440	(107473196)	+	(AG)n	Simple_repeat	1	61	(0)	3850741
1400	23.6	2.6	4.8	chr8	37665442	37665792	(107472844)	+	MLT1F	LTR/ERVL-MaLR	204	546	(2)	3850742
798	27.6	4.4	5.2	chr8	37672216	37672467	(107466169)	C	MIRb	SINE/MIR	(17)	251	2	3850755
281	26.9	9.9	4.6	chr8	37691429	37691580	(107447056)	C	L2c	LINE/L2	(88)	3299	3139	3850797
33	0.0	0.0	0.0	chr8	37695353	37695383	(107443253)	+	(CCCAC)n	Simple_repeat	1	31	(0)	3850802
13	18.8	2.6	2.6	chr8	37695584	37695621	(107443015)	+	(GCG)n	Simple_repeat	1	39	(0)	3850803
1890	11.9	4.5	0.0	chr8	37735980	37736256	(107402380)	+	AluJr	SINE/Alu	1	290	(22)	3850886
14	16.6	0.0	5.1	chr8	37783133	37783171	(107355465)	+	A-rich	Low_complexity	1	39	(0)	3850960
157	26.1	2.7	0.7	chr8	37997386	37997826	(107140810)	+	(CT)n	Simple_repeat	1	453	(0)	3851396
887	21.8	0.5	2.5	chr8	37997827	37998024	(107140612)	+	MLT1A	LTR/ERVL-MaLR	181	374	(0)	3851395
33	3.4	7.5	4.2	chr8	38156962	38157028	(106981608)	+	(TTTC)n	Simple_repeat	1	72	(0)	3851767
2257	11.2	0.0	2.8	chr8	38157031	38157060	(106981576)	C	AluSx1	SINE/Alu	(0)	312	283	3851768
49	7.5	2.8	0.0	chr8	38157061	38157131	(106981505)	+	(TC)n	Simple_repeat	1	73	(0)	3851769
2395	9.4	0.0	0.0	chr8	38213907	38214204	(106924432)	C	AluSx	SINE/Alu	(14)	298	1	3851890
59	1.9	0.0	0.0	chr8	38214218	38214272	(106924364)	+	(TC)n	Simple_repeat	1	55	(0)	3851891
1769	16.8	2.3	1.6	chr8	38214290	38214592	(106924044)	C	AluJr	SINE/Alu	(7)	305	1	3851892
14	38.9	2.1	2.1	chr8	38345183	38345275	(106793361)	+	A-rich	Low_complexity	1	95	(0)	3852121
2263	10.4	0.3	0.3	chr8	38399498	38399796	(106738840)	+	AluSz	SINE/Alu	3	301	(11)	3852232
1158	13.7	0.0	0.0	chr8	38399797	38399949	(106738687)	+	AluSx	SINE/Alu	134	286	(26)	3852233
34	0.0	0.0	0.0	chr8	38399950	38399978	(106738658)	+	(AG)n	Simple_repeat	1	29	(0)	3852234
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
626	37.0	5.1	4.8	chr8	38506809	38507372	(106631264)	C	Mam_R4	LINE/Dong-R4	(77)	3732	3167	3852417
121	21.2	5.6	0.6	chr8	38507390	38507511	(106631125)	+	(TCTTC)n	Simple_repeat	1	131	(0)	3852418
2309	10.7	0.0	3.1	chr8	38507512	38507829	(106630807)	C	AluSg4	SINE/Alu	(1)	309	2	3852419
980	17.3	0.0	2.4	chr8	38771736	38771903	(106366733)	C	AluJr	SINE/Alu	(12)	300	137	3852938
622	17.8	4.7	17.3	chr8	38771904	38771981	(106366655)	C	MER5A	DNA/hAT-Charlie	(130)	59	1	3852937
12	10.1	5.7	2.7	chr8	38772013	38772025	(106366611)	+	GA-rich	Low_complexity	1	15	(0)	3852939
33	0.0	0.0	0.0	chr8	38772026	38772053	(106366583)	+	(AG)n	Simple_repeat	1	28	(0)	3852940
12	10.1	5.7	2.7	chr8	38772054	38772074	(106366562)	+	GA-rich	Low_complexity	16	35	(0)	3852941
797	29.0	5.0	5.5	chr8	38772169	38772533	(106366103)	+	L1M5	LINE/L1	5450	5812	(312)	3852942
23	3.7	0.0	0.0	chr8	38806449	38806476	(106332160)	+	(TG)n	Simple_repeat	1	28	(0)	3853005
28	5.9	0.0	0.0	chr8	38806476	38806511	(106332125)	+	(GA)n	Simple_repeat	1	36	(0)	3853006
51	0.0	0.0	0.0	chr8	38883713	38883756	(106254880)	+	(CA)n	Simple_repeat	1	44	(0)	3853130
45	5.3	1.7	0.0	chr8	38883769	38883827	(106254809)	+	(GA)n	Simple_repeat	1	60	(0)	3853131
49	0.0	2.2	0.0	chr8	39568347	39568391	(105570245)	+	(GA)n	Simple_repeat	1	46	(0)	3854035
1785	13.5	8.4	1.7	chr8	39568392	39568575	(105570061)	C	THE1D	LTR/ERVL-MaLR	(170)	211	1	3854034
68	9.9	0.0	1.8	chr8	40760681	40760792	(104377844)	+	(TC)n	Simple_repeat	1	112	(0)	3855876
29	21.6	0.0	2.9	chr8	41098956	41099024	(104039612)	+	GA-rich	Low_complexity	1	69	(0)	3856414
32	0.0	0.0	0.0	chr8	41099029	41099039	(104039597)	+	(TG)n	Simple_repeat	1	11	(0)	3856415
38	2.8	0.0	0.0	chr8	41099040	41099076	(104039560)	+	(GA)n	Simple_repeat	1	37	(0)	3856416
32	0.0	0.0	0.0	chr8	41099077	41099102	(104039534)	+	(TG)n	Simple_repeat	2	27	(0)	3856417
182	13.9	2.7	0.0	chr8	41099174	41099209	(104039427)	C	MIR3	SINE/MIR	(50)	158	122	3856418
1364	14.4	0.4	10.6	chr8	41528480	41528771	(103609865)	+	AluJr	SINE/Alu	35	296	(16)	3857156
341	14.7	4.2	1.4	chr8	41804987	41805055	(103333581)	C	Charlie1b	DNA/hAT-Charlie	(8)	515	445	3857619
37	0.0	0.0	2.8	chr8	41805065	41805100	(103333536)	+	(TG)n	Simple_repeat	1	36	(0)	3857620
91	17.8	0.0	1.1	chr8	41805101	41805266	(103333370)	+	(CT)n	Simple_repeat	2	165	(0)	3857621
1498	19.9	0.4	1.9	chr8	41805270	41805535	(103333101)	C	AluJo	SINE/Alu	(39)	273	12	3857622
586	15.9	8.3	8.3	chr8	41818661	41818753	(103319883)	C	FLAM_C	SINE/Alu	(10)	133	35	3857649
3608	12.4	4.2	0.9	chr8	41818754	41819299	(103319337)	+	MER61E	LTR/ERV1	1	565	(4)	3857650
2300	10.3	0.0	0.7	chr8	41821766	41822065	(103316571)	+	AluSx	SINE/Alu	1	298	(14)	3857655
83	10.6	2.9	0.0	chr8	41822066	41822201	(103316435)	+	(GAAA)n	Simple_repeat	1	140	(0)	3857656
193	33.6	7.2	4.1	chr8	41822204	41822324	(103316312)	C	L3	LINE/CR1	(1386)	2713	2589	3857653
15	25.2	1.2	7.3	chr8	42153361	42153441	(102985195)	+	(GCGCCT)n	Simple_repeat	1	82	(0)	3858238
1762	13.0	5.8	7.3	chr8	42194041	42194241	(102944395)	C	AluJb	SINE/Alu	(0)	312	118	3858316
49	0.0	0.0	0.0	chr8	42194242	42194283	(102944353)	+	(GT)n	Simple_repeat	1	42	(0)	3858317
1762	13.0	5.8	7.3	chr8	42194284	42194397	(102944239)	C	AluJb	SINE/Alu	(195)	117	2	3858316
1918	17.1	2.8	7.7	chr8	42194398	42194477	(102944159)	C	L1MB3	LINE/L1	(353)	5830	5750	3858314
2177	13.1	0.3	0.3	chr8	42259700	42260005	(102878631)	+	AluSx1	SINE/Alu	1	306	(6)	3858460
15	4.8	4.5	0.0	chr8	42260006	42260027	(102878609)	+	(GA)n	Simple_repeat	1	23	(0)	3858461
1118	23.1	1.8	0.0	chr8	42260028	42260295	(102878341)	C	MER31-int	LTR/ERV1	(4372)	564	292	3858449
86	10.9	0.8	0.0	chr8	42303055	42303183	(102835453)	+	(GA)n	Simple_repeat	1	130	(0)	3858544
57	0.0	0.0	0.0	chr8	42379379	42379427	(102759209)	+	(AG)n	Simple_repeat	1	49	(0)	3858683
198	22.5	2.9	3.3	chr8	42380357	42380804	(102757832)	+	A-rich	Low_complexity	1	443	(0)	3858687
31	3.0	0.0	0.0	chr8	42380805	42380838	(102757798)	+	(AAGG)n	Simple_repeat	1	34	(0)	3858688
198	22.5	2.9	3.3	chr8	42380839	42380974	(102757662)	+	A-rich	Low_complexity	444	581	(0)	3858689
673	23.3	2.1	0.4	chr8	42451134	42452767	(102685869)	+	GA-rich	Low_complexity	1	1668	(0)	3858811
480	21.7	15.1	2.6	chr8	42452949	42453104	(102685532)	C	MER5A	DNA/hAT-Charlie	(0)	189	11	3858812
18	14.8	2.6	2.5	chr8	42455243	42455257	(102683379)	+	(TA)n	Simple_repeat	1	15	(0)	3858819
42	0.0	0.0	0.0	chr8	42455258	42455293	(102683343)	+	(AG)n	Simple_repeat	1	36	(0)	3858820
2268	7.4	3.4	0.0	chr8	42455379	42455662	(102682974)	+	AluY	SINE/Alu	1	294	(17)	3858821
2049	12.5	6.8	0.3	chr8	43139058	43139293	(101999343)	+	MER61-int	LTR/ERV1	4956	5214	(3)	3860173
1938	11.1	5.7	2.8	chr8	43139296	43139620	(101999016)	+	MER61A	LTR/ERV1	7	341	(0)	3860173
5538	14.0	2.6	0.9	chr8	43435164	43435892	(101702744)	+	HUERS-P3-int	LTR/ERV1	2425	3163	(5756)	3860502
40	0.0	0.0	0.0	chr8	43435893	43435926	(101702710)	+	(CT)n	Simple_repeat	1	34	(0)	3860507
5538	14.0	2.6	0.9	chr8	43435927	43436042	(101702594)	+	HUERS-P3-int	LTR/ERV1	3164	3283	(5636)	3860502
14060	15.1	5.1	3.4	chr8	43436037	43437627	(101701009)	+	HUERS-P3-int	LTR/ERV1	4540	6199	(2720)	3860502
507	22.6	4.1	8.8	chr8	47179274	47179337	(97959299)	+	L1M3	LINE/L1	5006	5058	(1082)	3861558
78	5.1	6.5	0.8	chr8	47179379	47179502	(97959134)	+	(GA)n	Simple_repeat	1	132	(0)	3861560
350	20.5	0.5	2.4	chr8	47179510	47179613	(97959023)	+	L1M3	LINE/L1	5079	5178	(968)	3861558
305	26.2	0.0	3.6	chr8	47226107	47226189	(97912447)	C	L2b	LINE/L2	(3)	3372	3293	3861618
39	2.7	0.0	0.0	chr8	47226194	47226231	(97912405)	+	(TC)n	Simple_repeat	1	38	(0)	3861619
15	25.0	3.1	3.0	chr8	47260886	47260950	(97877686)	+	(GGCGC)n	Simple_repeat	1	67	(0)	3861679
2402	9.2	0.3	0.0	chr8	47647335	47647616	(97491020)	+	AluSx	SINE/Alu	3	285	(27)	3862199
79	3.9	0.0	0.0	chr8	47647617	47647697	(97490939)	+	(AG)n	Simple_repeat	1	81	(0)	3862200
1034	31.0	14.7	3.3	chr8	47647698	47648373	(97490263)	C	L2a	LINE/L2	(174)	3252	2438	3862198
25160	17.0	3.0	3.1	chr8	47995254	47998768	(97139868)	C	HERVFH21-int	LTR/ERV1	(3122)	3407	1	3862734
3405	8.4	1.4	1.7	chr8	47998769	47999250	(97139386)	C	LTR21A	LTR/ERV1	(0)	481	1	3862734
338	34.1	12.4	3.0	chr8	50056514	50056746	(95081890)	+	MIR	SINE/MIR	5	262	(0)	3865186
1990	14.6	11.9	0.8	chr8	52884661	52884849	(92253787)	C	MSTA	LTR/ERVL-MaLR	(0)	428	220	3868827
78	0.0	3.9	0.0	chr8	52884850	52884926	(92253710)	+	(GA)n	Simple_repeat	1	80	(0)	3868828
1990	14.6	11.9	0.8	chr8	52884927	52885116	(92253520)	C	MSTA	LTR/ERVL-MaLR	(209)	219	2	3868827
2422	8.3	0.0	0.3	chr8	54022731	54023018	(91115618)	C	AluSc	SINE/Alu	(21)	288	2	3870337
2306	8.4	0.0	1.0	chr8	55915435	55915732	(89222904)	+	AluSq2	SINE/Alu	13	307	(6)	3873190
41	16.3	3.7	0.0	chr8	55915780	55915861	(89222775)	+	GA-rich	Low_complexity	1	85	(0)	3873191
31	0.0	3.3	0.0	chr8	55939458	55939487	(89199149)	+	(AG)n	Simple_repeat	1	31	(0)	3873239
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
1801	18.7	11.7	1.3	chr8	58001815	58002279	(87136357)	C	MLT2B1	LTR/ERVL	(0)	520	1	3876041
51	0.0	0.0	0.0	chr8	58047592	58047635	(87091001)	+	(CT)n	Simple_repeat	1	44	(0)	3876108
285	33.7	6.2	9.0	chr8	58067466	58067791	(87070845)	+	L2a	LINE/L2	3071	3426	(0)	3876129
827	22.8	11.7	4.9	chr8	58254085	58254406	(86884230)	+	MLT2C1	LTR/ERVL	5	346	(51)	3876341
78	3.9	0.0	0.0	chr8	58254407	58254486	(86884150)	+	(TC)n	Simple_repeat	1	80	(0)	3876342
827	22.8	11.7	4.9	chr8	58254487	58254528	(86884108)	+	MLT2C1	LTR/ERVL	347	397	(0)	3876341
3350	24.5	8.1	6.0	chr8	58254529	58255617	(86883019)	+	L1MC4	LINE/L1	6900	8042	(0)	3876338
630	35.7	4.2	2.6	chr8	60417832	60418248	(84720388)	+	MamRep605	LTR?	426	849	(0)	3879118
91	14.5	2.2	2.1	chr8	60759369	60759552	(84379084)	+	(CTCTCC)n	Simple_repeat	1	188	(0)	3879703
399	28.7	2.4	0.0	chr8	60800840	60800961	(84337675)	+	Eulor12	DNA?	60	184	(0)	3879749
50	9.2	2.5	0.0	chr8	60816074	60816154	(84322482)	+	(TC)n	Simple_repeat	1	83	(0)	3879764
249	30.3	11.4	10.9	chr8	61063134	61063260	(84075376)	C	L2c	LINE/L2	(64)	3323	3182	3880113
53	2.0	0.0	0.0	chr8	61063261	61063310	(84075326)	+	(GA)n	Simple_repeat	1	50	(0)	3880114
249	30.3	11.4	10.9	chr8	61063311	61063567	(84075069)	C	L2c	LINE/L2	(206)	3181	2938	3880113
46	7.4	0.0	0.0	chr8	64618571	64618627	(80520009)	+	(TC)n	Simple_repeat	1	57	(0)	3884701
2210	14.4	0.0	0.0	chr8	65661682	65661993	(79476643)	+	AluSz	SINE/Alu	1	312	(0)	3886181
40	5.3	3.3	0.0	chr8	65661995	65662054	(79476582)	+	(CCCTCT)n	Simple_repeat	1	62	(0)	3886182
10662	4.0	0.1	7.2	chr8	65662055	65663547	(79475089)	+	SVA_D	Retroposon/SVA	1	1386	(0)	3886183
912	24.6	7.6	7.6	chr8	66304660	66304798	(78833838)	C	LTR102_Mam	LTR/ERVL	(120)	731	602	3887137
66	4.4	0.0	0.0	chr8	66304799	66304868	(78833768)	+	(TC)n	Simple_repeat	1	70	(0)	3887138
912	24.6	7.6	7.6	chr8	66304869	66305111	(78833525)	C	LTR102_Mam	LTR/ERVL	(250)	601	349	3887137
299	25.9	4.0	14.4	chr8	66521727	66521790	(78616846)	+	MIR	SINE/MIR	15	79	(183)	3887532
76	0.0	0.0	0.0	chr8	66521791	66521855	(78616781)	+	(GA)n	Simple_repeat	1	65	(0)	3887533
589	25.1	2.5	4.0	chr8	66521856	66522052	(78616584)	+	MIRc	SINE/MIR	80	261	(7)	3887532
14	15.6	5.6	0.0	chr8	66667191	66667226	(78471410)	+	(CACT)n	Simple_repeat	1	38	(0)	3887826
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
310	28.7	0.0	11.7	chr8	67976199	67976360	(77162276)	+	MLT1H1	LTR/ERVL-MaLR	141	283	(272)	3890097
290	10.4	0.9	1.5	chr8	67976374	67976830	(77161806)	+	(GA)n	Simple_repeat	1	461	(0)	3890098
441	28.9	11.6	0.0	chr8	67976842	67977031	(77161605)	+	MLT1H1	LTR/ERVL-MaLR	322	536	(19)	3890097
2245	13.6	0.0	0.0	chr8	68257479	68257788	(76880848)	C	AluSz6	SINE/Alu	(2)	310	1	3890458
207	29.9	3.6	3.2	chr8	68589345	68590290	(76548346)	+	GA-rich	Low_complexity	1	980	(0)	3890902
27	19.1	0.0	0.0	chr8	69471973	69472027	(75666609)	+	GA-rich	Low_complexity	1	55	(0)	3892068
1700	17.7	5.0	0.0	chr8	69890211	69890517	(75248119)	+	AluJo	SINE/Alu	1	312	(0)	3892764
731	21.7	5.0	6.0	chr8	69893350	69893408	(75245228)	C	MER58C	DNA/hAT-Charlie	(13)	202	139	3892770
44	7.2	0.0	0.0	chr8	69893409	69893466	(75245170)	+	(TCTC)n	Simple_repeat	1	58	(0)	3892771
731	21.7	5.0	6.0	chr8	69893467	69893607	(75245029)	C	MER58C	DNA/hAT-Charlie	(77)	138	5	3892770
1183	23.9	5.0	5.5	chr8	69915394	69915599	(75223037)	+	MLT1A	LTR/ERVL-MaLR	4	201	(173)	3892809
43	8.3	5.1	0.0	chr8	69915600	69915677	(75222959)	+	(TC)n	Simple_repeat	1	82	(0)	3892810
1183	23.9	5.0	5.5	chr8	69915678	69915815	(75222821)	+	MLT1A	LTR/ERVL-MaLR	202	346	(28)	3892809
48	4.1	0.0	0.0	chr8	70160653	70160702	(74977934)	+	(GA)n	Simple_repeat	1	50	(0)	3893380
251	26.8	6.7	4.0	chr8	70160736	70160836	(74977800)	+	AmnSINE1	SINE/5S-Deu-L2	322	425	(150)	3893381
27	28.0	1.3	0.0	chr8	70245503	70245579	(74893057)	+	(TC)n	Simple_repeat	1	78	(0)	3893490
16	22.2	3.9	1.9	chr8	70245579	70245630	(74893006)	+	(CACATA)n	Simple_repeat	1	54	(0)	3893491
11	24.9	0.0	2.5	chr8	70245660	70245699	(74892937)	+	A-rich	Low_complexity	1	40	(0)	3893492
2178	17.8	4.6	4.8	chr8	70336325	70336438	(74802198)	C	L1MB2	LINE/L1	(264)	5907	5791	3893639
1604	12.3	10.0	8.6	chr8	70336439	70336812	(74801824)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	3893642
1674	10.1	10.6	0.4	chr8	70440326	70440563	(74698073)	+	AluSx	SINE/Alu	9	273	(39)	3893815
275	33.6	5.7	0.5	chr8	70440566	70440875	(74697761)	+	GA-rich	Low_complexity	1	323	(0)	3893816
275	33.6	5.7	0.5	chr8	70441226	70441608	(74697028)	+	GA-rich	Low_complexity	690	1098	(0)	3893817
275	33.6	5.7	0.5	chr8	70441941	70442169	(74696467)	+	GA-rich	Low_complexity	1448	1688	(0)	3893818
57	1.9	0.0	0.0	chr8	70990734	70990786	(74147850)	+	(AG)n	Simple_repeat	1	53	(0)	3894617
272	34.2	9.7	8.5	chr8	71274516	71274975	(73863661)	C	L2b	LINE/L2	(0)	3375	2910	3895015
404	34.0	13.1	0.5	chr8	71301197	71301397	(73837239)	+	MIRc	SINE/MIR	26	255	(13)	3895046
361	32.3	4.2	3.7	chr8	71463350	71463513	(73675123)	+	L3	LINE/CR1	3927	4091	(8)	3895234
68	0.0	0.0	0.0	chr8	71463576	71463633	(73675003)	+	(TC)n	Simple_repeat	1	58	(0)	3895235
15	18.3	0.0	3.0	chr8	71463650	71463699	(73674937)	+	(CA)n	Simple_repeat	1	48	(0)	3895236
16	9.8	0.0	0.0	chr8	72069738	72069759	(73068877)	+	(A)n	Simple_repeat	1	22	(0)	3896032
27	8.0	2.5	0.0	chr8	72069789	72069828	(73068808)	+	(AG)n	Simple_repeat	1	41	(0)	3896033
205	38.0	0.0	0.0	chr8	72069839	72069930	(73068706)	+	MIRb	SINE/MIR	168	259	(9)	3896034
610	24.7	11.7	11.3	chr8	72418089	72418334	(72720302)	C	L1MCc	LINE/L1	(4660)	2362	2086	3896418
405	20.2	9.6	0.0	chr8	72418340	72418443	(72720193)	+	MLT1F2	LTR/ERVL-MaLR	61	175	(385)	3896420
79	1.4	0.0	0.0	chr8	72418450	72418521	(72720115)	+	(TC)n	Simple_repeat	1	72	(0)	3896421
929	25.3	5.3	0.4	chr8	72418526	72418795	(72719841)	+	MLT1F2	LTR/ERVL-MaLR	276	559	(1)	3896420
215	32.7	8.9	5.8	chr8	72528491	72528610	(72610026)	C	L3b	LINE/CR1	(409)	4823	4700	3896577
266	26.9	0.0	13.1	chr8	72528663	72528769	(72609867)	+	X6B_LINE	LINE/CR1	980	1072	(0)	3896578
42	0.0	0.0	0.0	chr8	72882521	72882556	(72256080)	+	(GA)n	Simple_repeat	1	36	(0)	3897030
28	0.0	0.0	0.0	chr8	73009049	73009074	(72129562)	+	(GAG)n	Simple_repeat	1	26	(0)	3897250
227	18.6	2.3	0.0	chr8	73095530	73095572	(72043064)	+	MamGypLTR1a	LTR/Gypsy	90	133	(651)	3897411
40	34.2	3.0	0.0	chr8	73315110	73315278	(71823358)	+	(TC)n	Simple_repeat	1	174	(0)	3897775
400	30.7	6.4	3.8	chr8	73469933	73470115	(71668521)	+	MIRb	SINE/MIR	4	191	(77)	3898024
501	26.7	13.4	2.4	chr8	73669509	73669637	(71468999)	+	L2a	LINE/L2	2933	3071	(355)	3898311
40	0.0	0.0	0.0	chr8	73669638	73669671	(71468965)	+	(TC)n	Simple_repeat	1	34	(0)	3898312
501	26.7	13.4	2.4	chr8	73669672	73669752	(71468884)	+	L2a	LINE/L2	3072	3169	(257)	3898311
58	4.9	0.0	0.0	chr8	74950404	74950466	(70188170)	+	(TC)n	Simple_repeat	1	63	(0)	3900349
39	7.9	1.8	0.0	chr8	75408225	75408279	(69730357)	+	(AG)n	Simple_repeat	1	56	(0)	3900916
46	6.8	0.0	1.6	chr8	75430468	75430531	(69708105)	+	(AG)n	Simple_repeat	1	64	(0)	3900958
51	5.5	0.0	0.0	chr8	76207808	76207864	(68930772)	+	(TC)n	Simple_repeat	1	57	(0)	3901950
653	31.0	9.0	12.0	chr8	76478851	76479550	(68659086)	+	LTR102_Mam	LTR/ERVL	25	701	(150)	3902288
24	14.4	4.3	0.0	chr8	76681172	76681218	(68457418)	+	(CT)n	Simple_repeat	1	49	(0)	3902546
18	24.1	5.8	2.2	chr8	76681721	76681806	(68456830)	+	(CTCCCT)n	Simple_repeat	1	91	(0)	3902548
52	11.9	4.3	0.0	chr8	76683610	76683701	(68454935)	+	GA-rich	Low_complexity	1	96	(0)	3902552
12	27.1	3.1	3.0	chr8	76738578	76738599	(68400037)	+	(TTTC)n	Simple_repeat	1	23	(0)	3902594
60	8.0	0.0	0.0	chr8	76738600	76738680	(68399956)	+	(TTCC)n	Simple_repeat	1	81	(0)	3902595
12	27.1	3.1	3.0	chr8	76738681	76738700	(68399936)	+	(TTTC)n	Simple_repeat	4	24	(0)	3902596
39	2.3	4.4	0.0	chr8	76738701	76738745	(68399891)	+	(TC)n	Simple_repeat	1	47	(0)	3902597
1731	15.3	6.8	0.0	chr8	76738754	76739014	(68399622)	C	AluJb	SINE/Alu	(32)	280	1	3902598
1909	15.9	1.4	0.0	chr8	76838774	76839050	(68299586)	+	AluSz	SINE/Alu	1	281	(31)	3902719
55	0.0	0.0	0.0	chr8	76839054	76839100	(68299536)	+	(AG)n	Simple_repeat	1	47	(0)	3902720
3302	27.6	13.8	4.0	chr8	76873323	76874019	(68264617)	C	MLT1J2-int	LTR/ERVL-MaLR	(1)	1386	578	3902743
34	0.0	0.0	0.0	chr8	76874020	76874048	(68264588)	+	(TC)n	Simple_repeat	1	29	(0)	3902744
3302	27.6	13.8	4.0	chr8	76874049	76874593	(68264043)	C	MLT1J2-int	LTR/ERVL-MaLR	(810)	577	3	3902743
2339	29.9	11.2	2.7	chr8	77026137	77026757	(68111879)	+	ERV3-16A3_I-int	LTR/ERVL	1067	1747	(3249)	3902964
2299	21.2	10.9	0.7	chr8	77251724	77252238	(67886398)	C	MLT2B3	LTR/ERVL	(20)	697	164	3903272
28	3.1	0.0	0.0	chr8	78232355	78232387	(66906249)	+	(CT)n	Simple_repeat	1	33	(0)	3904398
47	0.0	0.0	0.0	chr8	78232388	78232427	(66906209)	+	(TG)n	Simple_repeat	1	40	(0)	3904399
267	11.1	0.0	0.0	chr8	79684508	79684543	(65454093)	+	L2a	LINE/L2	3376	3411	(15)	3906331
22	15.2	0.0	2.5	chr8	79684677	79684716	(65453920)	+	GA-rich	Low_complexity	1	40	(0)	3906332
2068	13.4	0.3	0.3	chr8	79790686	79790976	(65347660)	+	AluSq2	SINE/Alu	1	291	(22)	3906521
36	0.0	0.0	0.0	chr8	79790977	79791007	(65347629)	+	(AG)n	Simple_repeat	1	31	(0)	3906522
2693	18.1	7.6	1.6	chr8	79991741	79991909	(65146727)	+	MLT1F1	LTR/ERVL-MaLR	12	187	(382)	3906839
60	0.0	0.0	0.0	chr8	79991910	79991960	(65146676)	+	(CT)n	Simple_repeat	1	51	(0)	3906840
2693	18.1	7.6	1.6	chr8	79991961	79992307	(65146329)	+	MLT1F1	LTR/ERVL-MaLR	188	561	(8)	3906839
2453	8.4	0.3	0.0	chr8	80106372	80106655	(65031981)	C	AluY	SINE/Alu	(26)	285	1	3907032
305	11.7	0.0	3.2	chr8	80106656	80106705	(65031931)	C	L1MA1	LINE/L1	(219)	6083	6034	3907031
335	29.9	11.1	8.0	chr8	80163765	80163964	(64974672)	+	L1ME4a	LINE/L1	5718	5924	(200)	3907134
44	2.4	0.0	0.0	chr8	80164014	80164055	(64974581)	+	(GA)n	Simple_repeat	1	42	(0)	3907135
256	33.3	8.9	5.6	chr8	80164109	80164521	(64974115)	+	L1M5	LINE/L1	4606	5033	(1113)	3907136
2222	9.5	0.0	0.3	chr8	80251137	80251420	(64887216)	+	AluSx1	SINE/Alu	1	283	(29)	3907338
40	4.5	0.0	0.0	chr8	80251421	80251466	(64887170)	+	(AAAT)n	Simple_repeat	1	46	(0)	3907339
23	7.0	0.0	0.0	chr8	80251530	80251559	(64887077)	+	(GA)n	Simple_repeat	1	30	(0)	3907340
2584	6.6	0.3	0.0	chr8	81089288	81089590	(64049046)	+	AluY	SINE/Alu	1	304	(7)	3908807
1945	22.8	5.0	5.2	chr8	81089591	81089847	(64048789)	C	LTR40a	LTR/ERVL	(257)	262	1	3908806
162	10.5	0.0	0.0	chr8	81842344	81842580	(63296056)	+	(GAGA)n	Simple_repeat	1	237	(0)	3909852
1714	29.4	18.2	2.0	chr8	90560089	90560767	(54577869)	C	L1MC4a	LINE/L1	(105)	7777	6918	3921352
33	2.8	2.8	0.0	chr8	90560768	90560803	(54577833)	+	(TC)n	Simple_repeat	1	37	(0)	3921353
1714	29.4	18.2	2.0	chr8	90560804	90561167	(54577469)	C	L1MC4a	LINE/L1	(965)	6917	6527	3921352
1034	16.1	0.0	0.0	chr8	90906913	90907055	(54231581)	C	AluJb	SINE/Alu	(39)	273	131	3921779
26	0.0	0.0	0.0	chr8	90907123	90907151	(54231485)	+	(TG)n	Simple_repeat	1	29	(0)	3921780
44	0.0	0.0	0.0	chr8	90907152	90907189	(54231447)	+	(GA)n	Simple_repeat	1	38	(0)	3921781
17	0.0	0.0	0.0	chr8	91249496	91249514	(53889122)	+	(TC)n	Simple_repeat	1	19	(0)	3922291
17	18.6	0.0	8.0	chr8	92051538	92051587	(53087049)	+	(TC)n	Simple_repeat	1	50	(0)	3923354
21	17.8	0.0	0.0	chr8	92051565	92051602	(53087034)	+	(CA)n	Simple_repeat	1	38	(0)	3923355
43	2.5	0.0	0.0	chr8	92051603	92051643	(53086993)	+	(CT)n	Simple_repeat	1	41	(0)	3923356
33	0.0	0.0	0.0	chr8	92060923	92060950	(53077686)	+	(GA)n	Simple_repeat	1	28	(0)	3923371
1558	20.3	4.1	9.9	chr8	92645125	92645358	(52493278)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	190	3924107
42	0.0	0.0	0.0	chr8	92645359	92645394	(52493242)	+	(GA)n	Simple_repeat	1	36	(0)	3924108
1558	20.3	4.1	9.9	chr8	92645395	92645574	(52493062)	C	MLT1B	LTR/ERVL-MaLR	(201)	189	1	3924107
1348	19.3	16.6	2.2	chr8	93003139	93003309	(52135327)	C	MSTA	LTR/ERVL-MaLR	(0)	428	227	3924579
36	0.0	0.0	0.0	chr8	93003310	93003340	(52135296)	+	(GA)n	Simple_repeat	1	31	(0)	3924580
1348	19.3	16.6	2.2	chr8	93003341	93003533	(52135103)	C	MSTA	LTR/ERVL-MaLR	(202)	226	1	3924579
641	24.4	12.8	2.6	chr8	95104746	95105010	(50033626)	+	MLT1M	LTR/ERVL-MaLR	106	401	(271)	3928200
24	0.0	0.0	0.0	chr8	95105041	95105066	(50033570)	+	(AC)n	Simple_repeat	1	26	(0)	3928201
60	0.0	0.0	0.0	chr8	95105067	95105117	(50033519)	+	(AG)n	Simple_repeat	1	51	(0)	3928202
267	32.8	7.8	0.0	chr8	95105145	95105263	(50033373)	+	MLT1M	LTR/ERVL-MaLR	544	672	(0)	3928200
16	18.5	0.0	2.6	chr8	95133990	95134028	(50004608)	+	(CGC)n	Simple_repeat	1	39	(0)	3928265
2241	9.9	0.3	0.0	chr8	95170336	95170619	(49968017)	+	AluSz	SINE/Alu	1	285	(27)	3928328
26	0.0	0.0	0.0	chr8	95170620	95170644	(49967992)	+	(AAAG)n	Simple_repeat	1	25	(0)	3928329
71	21.2	3.9	1.4	chr8	95170645	95170789	(49967847)	+	GA-rich	Low_complexity	59	206	(0)	3928330
32	3.2	0.0	0.0	chr8	95269957	95269988	(49868648)	+	(GA)n	Simple_repeat	1	32	(0)	3928508
55	0.0	0.0	0.0	chr8	96144245	96144291	(48994345)	+	(AG)n	Simple_repeat	1	47	(0)	3929805
31	0.0	0.0	0.0	chr8	96146682	96146708	(48991928)	+	(AC)n	Simple_repeat	1	27	(0)	3929810
21	4.0	0.0	0.0	chr8	96146709	96146734	(48991902)	+	(GA)n	Simple_repeat	1	26	(0)	3929811
66	7.7	0.0	0.0	chr8	96156355	96156437	(48982199)	+	(TC)n	Simple_repeat	1	83	(0)	3929822
50	2.2	0.0	0.0	chr8	96908108	96908154	(48230482)	+	(GT)n	Simple_repeat	1	47	(0)	3930999
42	5.0	4.7	1.5	chr8	96908157	96908220	(48230416)	+	(GA)n	Simple_repeat	1	67	(0)	3931000
5294	22.6	5.6	4.2	chr8	97077819	97078719	(48059917)	C	L1MC5	LINE/L1	(746)	8558	7627	3931193
56	2.0	0.0	0.0	chr8	97078764	97078815	(48059821)	+	(TC)n	Simple_repeat	1	52	(0)	3931196
1750	16.7	2.8	2.1	chr8	97078817	97079103	(48059533)	C	AluJo	SINE/Alu	(23)	289	1	3931197
60	4.8	0.0	0.0	chr8	97101914	97101978	(48036658)	+	(CT)n	Simple_repeat	1	65	(0)	3931233
209	36.5	3.0	1.0	chr8	97101980	97102076	(48036560)	C	L2c	LINE/L2	(25)	3362	3264	3931234
58	1.9	0.0	0.0	chr8	98491163	98491216	(46647420)	+	(GA)n	Simple_repeat	1	54	(0)	3933768
46	8.2	0.0	1.4	chr8	98858275	98858323	(46280313)	+	(TA)n	Simple_repeat	1	49	(0)	3934310
51	2.1	0.0	0.0	chr8	98858324	98858371	(46280265)	+	(AG)n	Simple_repeat	1	48	(0)	3934311
46	8.2	0.0	1.4	chr8	98858372	98858390	(46280246)	+	(TA)n	Simple_repeat	2	19	(0)	3934312
586	13.3	0.0	0.0	chr8	98858392	98858466	(46280170)	C	AluSg4	SINE/Alu	(235)	75	1	3934313
15	9.7	0.0	0.0	chr8	100150590	100150611	(44988025)	+	(AG)n	Simple_repeat	1	22	(0)	3936243
1573	18.7	0.4	1.1	chr8	100744121	100744388	(44394248)	+	AluJr	SINE/Alu	2	267	(45)	3937380
58	14.8	3.3	1.6	chr8	100744398	100744518	(44394118)	+	A-rich	Low_complexity	1	125	(0)	3937381
2283	12.3	0.3	0.0	chr8	100744576	100744885	(44393751)	+	AluSp	SINE/Alu	3	313	(0)	3937382
2200	11.3	0.0	0.0	chr8	100930114	100930396	(44208240)	C	AluSx4	SINE/Alu	(27)	283	1	3937804
21	0.0	0.0	0.0	chr8	101082255	101082277	(44056359)	+	(TA)n	Simple_repeat	1	23	(0)	3938111
50	0.0	0.0	0.0	chr8	101082278	101082320	(44056316)	+	(AG)n	Simple_repeat	1	43	(0)	3938112
2471	26.2	9.4	6.9	chr8	101082324	101083371	(44055265)	+	HAL1	LINE/L1	710	1756	(751)	3938113
35	0.0	0.0	0.0	chr8	101097838	101097867	(44040769)	+	(GA)n	Simple_repeat	1	30	(0)	3938140
2715	13.4	3.7	6.0	chr8	101161364	101161682	(43976954)	+	MER21B	LTR/ERVL	1	325	(543)	3938271
37	4.4	2.0	2.0	chr8	101161683	101161731	(43976905)	+	(TC)n	Simple_repeat	1	50	(0)	3938272
2194	9.6	0.0	1.8	chr8	101161736	101161879	(43976757)	C	AluSx1	SINE/Alu	(35)	277	136	3938273
38	0.0	0.0	0.0	chr8	101196246	101196278	(43942358)	+	(GA)n	Simple_repeat	1	33	(0)	3938333
2137	12.0	0.0	0.0	chr8	101196280	101196555	(43942081)	C	AluSz	SINE/Alu	(36)	276	1	3938334
2393	7.5	1.4	0.3	chr8	104006268	104006562	(41132074)	+	AluSp	SINE/Alu	1	298	(15)	3943046
54	3.7	0.0	0.0	chr8	104006627	104006681	(41131955)	+	(TC)n	Simple_repeat	1	55	(0)	3943047
33	2.9	0.0	0.0	chr8	104588965	104588999	(40549637)	+	(CGC)n	Simple_repeat	1	35	(0)	3943936
13	18.9	6.0	1.9	chr8	104589053	104589102	(40549534)	+	(GCCGCCC)n	Simple_repeat	1	53	(0)	3943937
3490	13.1	7.4	1.4	chr8	104667105	104667677	(40470959)	+	LTR9	LTR/ERV1	1	610	(2)	3944054
3666	12.9	5.5	2.8	chr8	104667678	104667762	(40470874)	C	MER50B	LTR/ERV1	(613)	84	1	3944053
659	25.5	2.4	4.9	chr8	105108755	105108974	(40029662)	+	Ricksha_b	DNA/MULE-MuDR	384	595	(1453)	3944730
36	7.7	3.6	0.0	chr8	105108975	105109030	(40029606)	+	(TC)n	Simple_repeat	1	58	(0)	3944731
1479	20.7	0.7	9.6	chr8	105109031	105109410	(40029226)	+	Ricksha_c	DNA/MULE-MuDR	561	898	(1150)	3944730
41	2.2	2.1	2.0	chr8	105768086	105768133	(39370503)	+	(CT)n	Simple_repeat	1	49	(0)	3945586
38	2.8	0.0	0.0	chr8	107805637	107805673	(37332963)	+	(TC)n	Simple_repeat	1	37	(0)	3948472
331	29.7	5.4	10.0	chr8	107805696	107805893	(37332743)	C	MIRb	SINE/MIR	(14)	216	18	3948473
964	16.4	0.6	1.2	chr8	107839972	107840132	(37298504)	+	MLT1A	LTR/ERVL-MaLR	2	161	(213)	3948523
240	17.0	3.8	1.3	chr8	107840154	107840678	(37297958)	+	(CT)n	Simple_repeat	1	545	(0)	3948524
62	1.8	0.0	0.0	chr8	108204747	108204803	(36933833)	+	(AG)n	Simple_repeat	1	57	(0)	3948992
1373	15.2	0.5	0.9	chr8	108759939	108760149	(36378487)	+	AluSx3	SINE/Alu	49	258	(53)	3949847
55	3.7	0.0	0.0	chr8	108760150	108760205	(36378431)	+	(GA)n	Simple_repeat	1	56	(0)	3949848
14	9.6	0.0	0.0	chr8	109644792	109644814	(35493822)	+	(CGC)n	Simple_repeat	1	23	(0)	3951139
14	27.7	0.0	2.1	chr8	109668114	109668160	(35470476)	+	G-rich	Low_complexity	1	47	(0)	3951175
44	0.0	0.0	0.0	chr8	109668166	109668203	(35470433)	+	(GA)n	Simple_repeat	1	38	(0)	3951176
281	27.1	10.6	3.3	chr8	109668312	109668433	(35470203)	+	MamRep137	DNA/TcMar-Tigger	246	377	(133)	3951177
40	2.6	0.0	0.0	chr8	115441861	115441899	(29696737)	+	(GA)n	Simple_repeat	1	39	(0)	3958712
24	0.0	0.0	0.0	chr8	115441900	115441925	(29696711)	+	(TG)n	Simple_repeat	1	26	(0)	3958713
378	32.0	7.1	4.7	chr8	115496070	115496302	(29642334)	C	MIRb	SINE/MIR	(8)	260	22	3958781
1790	14.4	1.1	1.1	chr8	115498096	115498373	(29640263)	+	AluJb	SINE/Alu	1	278	(34)	3958784
50	0.0	0.0	0.0	chr8	115498374	115498416	(29640220)	+	(TC)n	Simple_repeat	1	43	(0)	3958785
24	6.2	0.0	5.3	chr8	115517448	115517485	(29621151)	+	(GA)n	Simple_repeat	1	38	(0)	3958802
15	18.2	0.0	4.8	chr8	115663376	115663417	(29475219)	+	A-rich	Low_complexity	1	42	(0)	3958960
31	3.3	0.0	0.0	chr8	115668718	115668748	(29469888)	+	(AG)n	Simple_repeat	1	31	(0)	3958966
26	19.0	3.5	4.5	chr8	115669065	115669149	(29469487)	+	(CGC)n	Simple_repeat	1	88	(0)	3958967
31	3.3	0.0	0.0	chr8	115688475	115688505	(29450131)	+	(GA)n	Simple_repeat	1	31	(0)	3958993
57	0.0	0.0	0.0	chr8	116313382	116313430	(28825206)	+	(CT)n	Simple_repeat	1	49	(0)	3959864
56	7.1	0.0	0.0	chr8	116586336	116586409	(28552227)	+	(GA)n	Simple_repeat	1	74	(0)	3960274
2283	14.9	3.2	5.7	chr8	116586415	116586835	(28551801)	C	MLT2C2	LTR/ERVL	(54)	410	1	3960273
40	10.9	0.0	0.0	chr8	116589153	116589254	(28549382)	+	(AG)n	Simple_repeat	1	102	(0)	3960280
646	20.2	7.5	5.5	chr8	116589274	116589456	(28549180)	+	MIR	SINE/MIR	35	221	(41)	3960281
505	33.9	14.9	1.9	chr8	116878482	116878628	(28260008)	C	L3	LINE/CR1	(2308)	1791	1620	3960764
47	4.6	5.9	0.0	chr8	116878629	116878696	(28259940)	+	(TC)n	Simple_repeat	1	72	(0)	3960765
505	33.9	14.9	1.9	chr8	116878697	116878978	(28259658)	C	L3	LINE/CR1	(2480)	1619	1296	3960764
574	27.5	0.6	3.4	chr8	118080997	118081173	(27057463)	C	MIRb	SINE/MIR	(1)	267	96	3962669
15	18.5	0.0	2.6	chr8	118088679	118088727	(27049909)	+	(CTTTT)n	Simple_repeat	1	47	(0)	3962677
61	0.0	0.0	0.0	chr8	118113645	118113696	(27024940)	+	(CT)n	Simple_repeat	1	52	(0)	3962718
29	0.0	0.0	0.0	chr8	118113697	118113728	(27024908)	+	(AT)n	Simple_repeat	1	32	(0)	3962719
239	25.0	7.2	0.0	chr8	118187943	118188006	(26950630)	C	L2c	LINE/L2	(22)	3365	3297	3962868
42	17.6	1.1	3.2	chr8	118188038	118188129	(26950507)	+	GA-rich	Low_complexity	1	93	(0)	3962869
119	0.0	0.0	0.0	chr8	118914943	118915046	(26223590)	+	(GCTCTCTC)n	Simple_repeat	1	104	(0)	3964054
34	9.0	0.0	0.0	chr8	118951521	118951567	(26187069)	+	(TC)n	Simple_repeat	1	47	(0)	3964113
93	21.6	1.1	0.0	chr8	119070438	119070628	(26068008)	+	(TC)n	Simple_repeat	1	193	(0)	3964301
1516	14.8	6.0	14.6	chr8	119421975	119422393	(25716243)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3964798
31	0.0	0.0	0.0	chr8	119610491	119610517	(25528119)	+	(AG)n	Simple_repeat	1	27	(0)	3965066
2219	12.4	0.3	1.0	chr8	119610621	119610934	(25527702)	+	AluSx1	SINE/Alu	1	312	(0)	3965067
11	24.2	5.5	1.7	chr8	120125125	120125179	(25013457)	+	(CAGCGG)n	Simple_repeat	1	58	(0)	3966127
18	8.7	0.0	0.0	chr8	120125183	120125207	(25013429)	+	(GA)n	Simple_repeat	1	25	(0)	3966128
192	26.5	0.0	0.0	chr8	120161620	120161668	(24976968)	+	AmnSINE1	SINE/5S-Deu-L2	322	370	(205)	3966194
2131	12.2	0.0	0.7	chr8	120161671	120161964	(24976672)	C	AluSx	SINE/Alu	(20)	292	1	3966195
38	6.4	0.0	0.0	chr8	120619311	120619359	(24519277)	+	(AG)n	Simple_repeat	1	49	(0)	3966889
30	0.0	5.3	0.0	chr8	120755135	120755172	(24383464)	+	(TG)n	Simple_repeat	1	40	(0)	3967114
35	4.5	2.2	0.0	chr8	120755172	120755217	(24383419)	+	(GA)n	Simple_repeat	1	47	(0)	3967115
89	20.0	0.0	0.0	chr8	122026651	122026822	(23111814)	+	(TCTC)n	Simple_repeat	1	172	(0)	3969255
67	1.6	0.0	0.0	chr8	122773656	122773717	(22364919)	+	(TC)n	Simple_repeat	1	62	(0)	3970500
296	12.7	5.2	0.0	chr8	122773772	122773826	(22364810)	+	MLT1A	LTR/ERVL-MaLR	331	388	(2)	3970499
54	0.0	0.0	0.0	chr8	123060832	123060877	(22077759)	+	(AC)n	Simple_repeat	1	46	(0)	3971082
40	2.2	0.0	0.0	chr8	123060878	123060923	(22077713)	+	(TC)n	Simple_repeat	1	46	(0)	3971083
265	31.4	17.5	0.7	chr8	123395476	123395613	(21743023)	+	MIR	SINE/MIR	20	185	(77)	3971768
49	0.0	0.0	0.0	chr8	123587684	123587725	(21550911)	+	(GA)n	Simple_repeat	1	42	(0)	3972189
129	20.5	2.6	1.0	chr8	123644985	123645156	(21493480)	+	GA-rich	Low_complexity	1	175	(0)	3972308
2132	12.2	0.7	0.0	chr8	123645157	123645450	(21493186)	+	AluSz	SINE/Alu	1	296	(16)	3972309
129	20.5	2.6	1.0	chr8	123645451	123645580	(21493056)	+	GA-rich	Low_complexity	176	308	(0)	3972310
61	0.0	0.0	0.0	chr8	123998374	123998425	(21140211)	+	(CT)n	Simple_repeat	1	52	(0)	3972915
19396	13.8	3.6	1.3	chr8	123998426	123999363	(21139273)	C	L1M1	LINE/L1	(5809)	1756	818	3972914
365	28.1	9.9	2.8	chr8	124138842	124139123	(20999513)	C	LTR88b	LTR/Gypsy?	(381)	456	153	3973156
29	21.0	1.3	3.9	chr8	124350401	124350477	(20788159)	+	(TC)n	Simple_repeat	1	78	(0)	3973540
31	0.0	0.0	0.0	chr8	124350478	124350504	(20788132)	+	(CA)n	Simple_repeat	1	27	(0)	3973541
18	22.1	0.0	0.0	chr8	124474896	124474937	(20663699)	+	(GCC)n	Simple_repeat	1	42	(0)	3973782
18	23.0	0.0	5.9	chr8	124475020	124475087	(20663549)	+	(CCCGCC)n	Simple_repeat	1	68	(0)	3973783
15	19.9	2.5	0.0	chr8	124475055	124475094	(20663542)	+	(GCCCT)n	Simple_repeat	1	41	(0)	3973784
43	10.4	0.0	0.0	chr8	124622036	124622097	(20516539)	+	(GA)n	Simple_repeat	1	62	(0)	3974022
1674	20.8	3.5	9.9	chr8	124622100	124622512	(20516124)	+	L1MA9	LINE/L1	5794	6167	(145)	3974023
2126	13.2	2.9	8.0	chr8	125124263	125124470	(20014166)	C	L1MB8	LINE/L1	(1711)	4435	4244	3974965
33	0.0	0.0	0.0	chr8	125124471	125124498	(20014138)	+	(TC)n	Simple_repeat	1	28	(0)	3974966
1890	15.8	0.7	0.4	chr8	125124500	125124777	(20013859)	C	AluJo	SINE/Alu	(33)	279	1	3974967
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
735	26.5	16.1	0.9	chr8	125511830	125512260	(19626376)	C	L2a	LINE/L2	(0)	3426	2918	3975775
107	15.5	2.5	0.0	chr8	125512265	125512460	(19626176)	+	GA-rich	Low_complexity	1	201	(0)	3975776
400	24.6	4.2	0.6	chr8	125512511	125512645	(19625991)	+	MIR3	SINE/MIR	36	165	(97)	3975777
81	2.6	0.0	0.0	chr8	126750632	126750709	(18387927)	+	(AG)n	Simple_repeat	1	78	(0)	3978108
2321	17.0	2.5	1.1	chr8	126750774	126751236	(18387400)	+	L1MA7	LINE/L1	5821	6290	(1)	3978109
12	20.1	6.5	4.5	chr8	127736250	127736311	(17402325)	+	(AGCG)n	Simple_repeat	1	66	(0)	3979958
184	28.7	0.9	10.7	chr8	127898905	127899025	(17239611)	C	LFSINE_Vert	SINE/tRNA	(280)	179	71	3980357
1663	11.8	7.9	0.4	chr8	127937256	127937501	(17201135)	C	AluSz6	SINE/Alu	(0)	312	47	3980436
26	8.6	0.0	0.0	chr8	127937539	127937548	(17201088)	+	(AG)n	Simple_repeat	1	10	(0)	3980437
38	0.0	0.0	0.0	chr8	127937549	127937581	(17201055)	+	(AC)n	Simple_repeat	1	33	(0)	3980438
26	8.6	0.0	0.0	chr8	127937582	127937609	(17201027)	+	(AG)n	Simple_repeat	1	28	(0)	3980439
22	0.0	0.0	0.0	chr8	129937882	129937905	(15200731)	+	(TC)n	Simple_repeat	1	24	(0)	3983986
14	18.4	2.7	0.0	chr8	129946491	129946527	(15192109)	+	(GAGGACA)n	Simple_repeat	1	38	(0)	3984004
4197	20.4	8.9	1.6	chr8	130070337	130070806	(15067830)	+	MER21-int	LTR/ERVL	1712	2242	(1949)	3984309
143	15.5	0.4	0.4	chr8	130070815	130071055	(15067581)	+	GA-rich	Low_complexity	1	242	(0)	3984313
586	22.5	4.0	0.0	chr8	130071148	130071267	(15067369)	C	FLAM_C	SINE/Alu	(14)	129	5	3984314
2451	8.6	0.7	0.0	chr8	130262115	130262416	(14876220)	+	AluSg4	SINE/Alu	1	304	(6)	3984672
48	0.0	0.0	0.0	chr8	130262417	130262457	(14876179)	+	(AG)n	Simple_repeat	1	41	(0)	3984673
49	0.0	0.0	0.0	chr8	130276688	130276729	(14861907)	+	(AC)n	Simple_repeat	1	42	(0)	3984697
30	0.0	2.8	0.0	chr8	130276730	130276765	(14861871)	+	(TC)n	Simple_repeat	1	37	(0)	3984698
48	0.0	0.0	0.0	chr8	130300114	130300154	(14838482)	+	(AC)n	Simple_repeat	1	41	(0)	3984738
31	7.0	0.0	0.0	chr8	130300155	130300199	(14838437)	+	(GAGA)n	Simple_repeat	1	45	(0)	3984739
322	23.3	16.4	0.0	chr8	130442258	130442380	(14696256)	+	MIR3	SINE/MIR	28	179	(29)	3985041
2276	11.3	0.0	0.0	chr8	130462572	130462871	(14675765)	+	AluSp	SINE/Alu	1	300	(13)	3985091
1247	22.2	3.1	6.5	chr8	130462872	130462921	(14675715)	+	L1ME3	LINE/L1	5815	5869	(293)	3985089
51	2.1	0.0	0.0	chr8	130462922	130462969	(14675667)	+	(GA)n	Simple_repeat	1	48	(0)	3985092
1247	22.2	3.1	6.5	chr8	130462970	130463092	(14675544)	+	L1ME3	LINE/L1	5870	5972	(190)	3985089
3229	9.8	1.1	5.5	chr8	130573150	130573544	(14565092)	+	MLT2A2	LTR/ERVL	1	400	(53)	3985355
62	0.0	0.0	0.0	chr8	130573545	130573597	(14565039)	+	(TC)n	Simple_repeat	1	53	(0)	3985356
76	2.8	0.0	0.0	chr8	131019798	131019871	(14118765)	+	(TC)n	Simple_repeat	1	74	(0)	3986190
26	5.8	2.8	0.0	chr8	132186898	132186933	(12951703)	+	(TG)n	Simple_repeat	1	37	(0)	3988073
65	3.2	0.0	0.0	chr8	132186934	132186997	(12951639)	+	(GA)n	Simple_repeat	1	64	(0)	3988074
42	6.6	3.2	0.0	chr8	132948269	132948331	(12190305)	+	(GAGAGC)n	Simple_repeat	1	65	(0)	3989480
2241	9.3	0.4	0.0	chr8	133597891	133598170	(11540466)	+	AluSp	SINE/Alu	1	281	(32)	3990799
43	3.9	3.8	0.0	chr8	133598220	133598272	(11540364)	+	(CT)n	Simple_repeat	1	55	(0)	3990800
21	0.0	3.5	3.3	chr8	133598273	133598301	(11540335)	+	(AC)n	Simple_repeat	1	30	(0)	3990801
15	13.9	0.0	0.0	chr8	133598330	133598353	(11540283)	+	(TC)n	Simple_repeat	1	24	(0)	3990802
24	8.8	2.7	0.0	chr8	133598353	133598389	(11540247)	+	(CA)n	Simple_repeat	1	38	(0)	3990803
317	28.1	11.0	5.1	chr8	133851595	133851808	(11286828)	+	Helitron1Na_Mam	RC/Helitron	72	299	(763)	3991317
374	16.4	0.0	5.2	chr8	133851804	133851880	(11286756)	+	Helitron1Nb_Mam	RC/Helitron	670	742	(374)	3991318
884	19.5	9.1	0.0	chr8	133851956	133852145	(11286491)	C	MER3	DNA/hAT-Charlie	(0)	209	1	3991319
90	18.3	5.1	0.9	chr8	133885741	133885957	(11252679)	+	GA-rich	Low_complexity	1	228	(0)	3991377
2303	13.9	1.0	0.0	chr8	134412699	134413007	(10725629)	C	AluSz	SINE/Alu	(0)	312	1	3992278
388	25.2	0.0	2.5	chr8	134413008	134413109	(10725527)	C	L1MEh	LINE/L1	(738)	1497	1397	3992279
44	2.4	0.0	0.0	chr8	134413110	134413151	(10725485)	+	(TC)n	Simple_repeat	1	42	(0)	3992280
879	26.9	3.2	1.6	chr8	134413176	134413421	(10725215)	+	MIR	SINE/MIR	12	261	(1)	3992281
118	18.9	4.5	0.4	chr8	134534536	134534804	(10603832)	+	GA-rich	Low_complexity	1	281	(0)	3992454
6567	10.2	0.7	2.5	chr8	135434131	135434605	(9704031)	C	L1MA3	LINE/L1	(0)	6305	5832	3994010
42	4.7	0.0	0.0	chr8	135434606	135434650	(9703986)	+	(TC)n	Simple_repeat	1	45	(0)	3994011
720	31.3	13.4	1.4	chr8	135946680	135946766	(9191870)	C	LTR16A2	LTR/ERVL	(0)	495	393	3994845
76	2.8	0.0	0.0	chr8	135946767	135946840	(9191796)	+	(GA)n	Simple_repeat	1	74	(0)	3994846
720	31.3	13.4	1.4	chr8	135946841	135947183	(9191453)	C	LTR16A2	LTR/ERVL	(103)	392	6	3994845
171	17.7	1.7	1.1	chr8	138856385	138856740	(6281896)	+	GA-rich	Low_complexity	1	362	(0)	3999455
39	2.7	0.0	0.0	chr8	139947908	139947945	(5190691)	+	(AG)n	Simple_repeat	1	38	(0)	4001124
575	27.7	1.9	0.6	chr8	139947970	139948129	(5190507)	+	MIRb	SINE/MIR	29	190	(78)	4001125
51	13.3	1.2	0.0	chr8	140522667	140522749	(4615887)	+	(AG)n	Simple_repeat	1	84	(0)	4002134
2436	16.8	12.5	0.4	chr8	140792073	140792563	(4346073)	+	MER68	LTR/ERVL	5	563	(0)	4002600
36	0.0	0.0	0.0	chr8	141073484	141073514	(4065122)	+	(GA)n	Simple_repeat	1	31	(0)	4003131
24	0.0	0.0	0.0	chr8	141073515	141073540	(4065096)	+	(TG)n	Simple_repeat	1	26	(0)	4003132
16	0.0	0.0	0.0	chr8	141117536	141117553	(4021083)	+	(CA)n	Simple_repeat	1	18	(0)	4003214
21	13.7	0.0	7.1	chr8	141128535	141128590	(4010046)	+	(GCCCC)n	Simple_repeat	1	56	(0)	4003236
13	21.5	3.4	4.9	chr8	141128648	141128706	(4009930)	+	G-rich	Low_complexity	1	61	(0)	4003237
58	1.9	0.0	0.0	chr8	141554360	141554413	(3584223)	+	(GA)n	Simple_repeat	1	54	(0)	4003796
1934	11.6	11.6	1.5	chr8	142887206	142887399	(2251237)	C	MSTA	LTR/ERVL-MaLR	(0)	428	208	4005414
61	0.0	0.0	0.0	chr8	142887400	142887451	(2251185)	+	(GA)n	Simple_repeat	1	52	(0)	4005415
1934	11.6	11.6	1.5	chr8	142887452	142887589	(2251047)	C	MSTA	LTR/ERVL-MaLR	(221)	207	58	4005414
14	0.0	0.0	0.0	chr8	143342296	143342313	(1796323)	+	(TTA)n	Simple_repeat	1	18	(0)	4006099
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
19	6.7	0.0	3.0	chr8	144104524	144104556	(1034080)	+	(TCGC)n	Simple_repeat	1	33	(0)	4007111
17	21.1	1.9	3.7	chr8	144522867	144522919	(615717)	+	(CGG)n	Simple_repeat	1	54	(0)	4007704
6230	10.0	1.6	4.2	chr8	145032726	145033850	(104786)	+	HERV9N-int	LTR/ERV1	3279	4213	(1161)	4008438
11	22.4	1.9	5.7	chr9	214965	215016	(138179701)	+	(CGCCGCG)n	Simple_repeat	1	53	(0)	4008802
676	29.3	1.2	0.0	chr9	899569	899732	(137494985)	C	Eulor2C	DNA?	(3)	166	1	4009973
17	28.4	2.3	3.4	chr9	969512	969597	(137425120)	+	(GGCTGC)n	Simple_repeat	1	88	(0)	4010075
4218	23.6	7.8	4.2	chr9	3441091	3441918	(134952799)	+	L1MC3	LINE/L1	6371	7206	(579)	4013617
24	16.6	0.0	0.0	chr9	3508951	3508991	(134885726)	+	(AC)n	Simple_repeat	1	41	(0)	4013710
20	10.0	3.1	0.0	chr9	3508977	3509008	(134885709)	+	(AG)n	Simple_repeat	1	33	(0)	4013711
22	12.8	0.0	0.0	chr9	3516714	3516747	(134877970)	+	(CT)n	Simple_repeat	1	34	(0)	4013719
31	12.9	3.4	0.0	chr9	3525764	3525843	(134868874)	+	GA-rich	Low_complexity	1	82	(0)	4013734
34	9.2	0.0	0.0	chr9	3525927	3526019	(134868698)	+	(AG)n	Simple_repeat	1	93	(0)	4013735
81	11.1	4.2	2.9	chr9	3532254	3532424	(134862293)	+	(TCTCCC)n	Simple_repeat	1	173	(0)	4013745
1813	15.2	3.4	0.7	chr9	3750353	3750635	(134644082)	C	AluJb	SINE/Alu	(21)	291	1	4014045
26	16.5	2.0	0.0	chr9	3750714	3750762	(134643955)	+	GA-rich	Low_complexity	1	50	(0)	4014046
510	31.7	8.3	5.0	chr9	4059527	4059829	(134334888)	C	L1MCc	LINE/L1	(5973)	450	137	4014464
51	2.1	0.0	0.0	chr9	4059830	4059877	(134334840)	+	(GA)n	Simple_repeat	1	48	(0)	4014466
510	31.7	8.3	5.0	chr9	4059878	4059991	(134334726)	C	L1MCc	LINE/L1	(6287)	136	18	4014464
2418	12.4	2.4	2.1	chr9	4544733	4545112	(133849605)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4015226
35	0.0	0.0	0.0	chr9	4545190	4545219	(133849498)	+	(TC)n	Simple_repeat	1	30	(0)	4015227
31	11.6	0.0	0.0	chr9	4600461	4600507	(133794210)	+	(GA)n	Simple_repeat	1	47	(0)	4015318
24	0.0	0.0	0.0	chr9	4644659	4644685	(133750032)	+	(TC)n	Simple_repeat	1	27	(0)	4015403
46	0.0	0.0	0.0	chr9	4644686	4644724	(133749993)	+	(CA)n	Simple_repeat	1	39	(0)	4015404
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
24	17.2	1.4	5.7	chr9	6646288	6646372	(131748345)	+	(TCCTCC)n	Simple_repeat	1	81	(0)	4018394
1922	13.8	2.0	0.0	chr9	6646386	6646676	(131748041)	+	AluJb	SINE/Alu	8	304	(8)	4018395
387	24.7	9.8	6.2	chr9	6779825	6780001	(131614716)	C	Charlie13b	DNA/hAT-Charlie	(157)	355	172	4018744
610	27.1	11.4	1.7	chr9	6780147	6780439	(131614278)	+	Tigger13a	DNA/TcMar-Tigger	159	483	(288)	4018745
2654	13.6	9.8	2.7	chr9	6873303	6873903	(131520814)	C	Tigger1	DNA/TcMar-Tigger	(1346)	1072	428	4018922
65	4.5	0.0	0.0	chr9	6873904	6873972	(131520745)	+	(GA)n	Simple_repeat	1	69	(0)	4018925
1688	18.4	5.6	0.0	chr9	6873973	6874293	(131520424)	C	Tigger1	DNA/TcMar-Tigger	(2076)	342	3	4018922
44	0.0	0.0	0.0	chr9	7052864	7052901	(131341816)	+	(AG)n	Simple_repeat	1	38	(0)	4019176
48	0.0	0.0	0.0	chr9	7703831	7703871	(130690846)	+	(AG)n	Simple_repeat	1	41	(0)	4020101
2133	11.1	0.0	0.7	chr9	8086580	8086858	(130307859)	+	AluSc8	SINE/Alu	1	277	(34)	4020631
96	3.2	0.0	0.0	chr9	8086859	8086953	(130307764)	+	(TC)n	Simple_repeat	1	95	(0)	4020632
64	16.9	0.0	0.0	chr9	8414871	8414985	(129979732)	+	GA-rich	Low_complexity	1	115	(0)	4021060
34	0.0	0.0	0.0	chr9	8745785	8745813	(129648904)	+	(TC)n	Simple_repeat	1	29	(0)	4021489
1652	17.6	1.8	0.4	chr9	8745817	8746089	(129648628)	C	AluJr	SINE/Alu	(31)	281	5	4021490
31	20.5	0.0	2.8	chr9	8889226	8889296	(129505421)	+	GA-rich	Low_complexity	1	71	(0)	4021721
430	20.0	1.1	1.1	chr9	8889309	8889399	(129505318)	+	L2a	LINE/L2	3336	3426	(0)	4021722
24	9.0	1.9	5.6	chr9	10612946	10612998	(127781719)	+	(CGCT)n	Simple_repeat	1	54	(0)	4024012
1428	19.9	3.4	5.0	chr9	13399820	13400120	(124994597)	+	AluJr	SINE/Alu	1	296	(16)	4027577
30	28.4	4.2	1.6	chr9	13400121	13400150	(124994567)	+	GA-rich	Low_complexity	92	121	(0)	4027578
146	20.2	3.8	3.0	chr9	13902257	13902674	(124492043)	+	GA-rich	Low_complexity	1	434	(0)	4028233
2263	9.1	1.4	0.0	chr9	13979131	13979405	(124415312)	C	AluSx1	SINE/Alu	(32)	280	2	4028347
59	1.9	0.0	0.0	chr9	14216493	14216547	(124178170)	+	(TC)n	Simple_repeat	1	55	(0)	4028664
40	0.0	0.0	0.0	chr9	14216548	14216591	(124178126)	+	(GT)n	Simple_repeat	1	44	(0)	4028665
30	18.8	0.0	0.0	chr9	14231292	14231346	(124163371)	+	GA-rich	Low_complexity	1	55	(0)	4028688
12	25.6	0.0	0.0	chr9	14320500	14320536	(124074181)	+	A-rich	Low_complexity	1	37	(0)	4028793
12	24.1	0.0	0.0	chr9	14322573	14322606	(124072111)	+	(CGCCC)n	Simple_repeat	1	34	(0)	4028796
47	4.3	0.0	0.0	chr9	14344087	14344135	(124050582)	+	(AG)n	Simple_repeat	1	49	(0)	4028835
19	33.6	2.1	2.0	chr9	14344220	14344315	(124050402)	+	GA-rich	Low_complexity	1	98	(0)	4028836
54	18.1	2.6	0.9	chr9	14388430	14388530	(124006187)	+	GA-rich	Low_complexity	12	115	(0)	4028906
393	27.8	11.8	0.9	chr9	14388538	14388762	(124005955)	+	L1ME3C	LINE/L1	5871	6123	(0)	4028902
67	1.6	0.0	0.0	chr9	14574966	14575027	(123819690)	+	(CT)n	Simple_repeat	1	62	(0)	4029189
31	7.7	0.0	0.0	chr9	14575028	14575069	(123819648)	+	(GT)n	Simple_repeat	1	42	(0)	4029190
743	24.6	14.2	0.8	chr9	15033249	15033486	(123361231)	+	MLT1G	LTR/ERVL-MaLR	10	284	(307)	4029809
27	9.1	0.0	7.4	chr9	15033494	15033547	(123361170)	+	GA-rich	Low_complexity	1	54	(0)	4029810
904	16.0	2.6	6.5	chr9	15033627	15033827	(123360890)	+	L1MA2	LINE/L1	6101	6293	(11)	4029811
1875	14.2	9.3	0.6	chr9	16359125	16359304	(122035413)	+	THE1B	LTR/ERVL-MaLR	1	199	(165)	4031845
55	0.0	0.0	0.0	chr9	16359305	16359351	(122035366)	+	(CT)n	Simple_repeat	1	47	(0)	4031846
38	8.3	0.0	0.0	chr9	17521244	17521295	(120873422)	+	(AG)n	Simple_repeat	1	52	(0)	4033445
15	14.9	2.6	2.5	chr9	17579384	17579422	(120815295)	+	(GCGCC)n	Simple_repeat	1	40	(0)	4033526
41	6.0	0.0	0.0	chr9	17731395	17731473	(120663244)	+	(AG)n	Simple_repeat	1	79	(0)	4033719
722	24.4	0.5	4.3	chr9	17731489	17731698	(120663019)	+	MLT1A	LTR/ERVL-MaLR	187	388	(2)	4033718
16	12.1	0.0	3.5	chr9	18291656	18291684	(120103033)	+	(TC)n	Simple_repeat	1	29	(0)	4034453
54	2.0	0.0	0.0	chr9	18291698	18291748	(120102969)	+	(CT)n	Simple_repeat	1	51	(0)	4034454
28	0.0	0.0	0.0	chr9	18291749	18291779	(120102938)	+	(AC)n	Simple_repeat	1	31	(0)	4034455
29	6.1	0.0	0.0	chr9	18448017	18448050	(119946667)	+	(CT)n	Simple_repeat	1	34	(0)	4034683
995	26.9	0.0	0.4	chr9	18667411	18667664	(119727053)	+	MIR	SINE/MIR	2	254	(8)	4034961
18	24.5	2.1	0.0	chr9	18675962	18676009	(119718708)	+	(TA)n	Simple_repeat	1	49	(0)	4034973
211	15.3	0.0	0.0	chr9	18976929	18976967	(119417750)	+	MIRb	SINE/MIR	195	237	(31)	4035338
43	4.5	0.0	0.0	chr9	19426347	19426392	(118968325)	+	(TC)n	Simple_repeat	1	46	(0)	4036304
20	5.1	9.8	0.0	chr9	19426395	19426435	(118968282)	+	(CCTTCC)n	Simple_repeat	1	45	(0)	4036305
17	4.3	0.0	0.0	chr9	20622409	20622432	(117772285)	+	(CGCT)n	Simple_repeat	1	24	(0)	4038138
18	7.8	0.0	0.0	chr9	20622452	20622478	(117772239)	+	(AGC)n	Simple_repeat	1	27	(0)	4038139
965	26.0	19.3	3.9	chr9	20640334	20640798	(117753919)	+	MLT1G3	LTR/ERVL-MaLR	40	577	(2)	4038170
308	24.5	1.8	7.5	chr9	21332307	21332443	(117062274)	+	MER4-int	LTR/ERV1	1060	1163	(5435)	4039095
29	6.3	0.0	0.0	chr9	21549422	21549455	(116845262)	+	(GT)n	Simple_repeat	1	34	(0)	4039350
398	34.9	6.3	4.1	chr9	21564944	21565161	(116829556)	+	MIRb	SINE/MIR	13	235	(33)	4039362
39	2.7	0.0	0.0	chr9	21565178	21565215	(116829502)	+	(GA)n	Simple_repeat	1	38	(0)	4039363
61	0.0	0.0	0.0	chr9	21802986	21803037	(116591680)	+	(AC)n	Simple_repeat	1	52	(0)	4039728
43	0.0	0.0	0.0	chr9	21987397	21987433	(116407284)	+	(AC)n	Simple_repeat	1	37	(0)	4039959
22	0.0	0.0	0.0	chr9	21987434	21987457	(116407260)	+	(GA)n	Simple_repeat	1	24	(0)	4039960
47	0.0	0.0	0.0	chr9	21990612	21990651	(116404066)	+	(GA)n	Simple_repeat	1	40	(0)	4039964
307	31.8	14.6	0.9	chr9	21990705	21990917	(116403800)	C	L1M5	LINE/L1	(276)	5848	5602	4039965
1617	15.9	5.5	13.3	chr9	21997026	21997401	(116397316)	C	Tigger3a	DNA/TcMar-Tigger	(2)	346	2	4039975
13	34.6	1.5	0.0	chr9	21997402	21997445	(116397272)	+	(ATATGT)n	Simple_repeat	6	50	(0)	4039976
32	9.1	0.0	0.0	chr9	21997463	21997510	(116397207)	+	(GAGA)n	Simple_repeat	1	48	(0)	4039977
1977	13.8	8.7	1.8	chr9	21997512	21997851	(116396866)	C	MLT2D	LTR/ERVL	(48)	366	1	4039973
31	9.7	0.0	0.0	chr9	22118261	22118304	(116276413)	+	(GA)n	Simple_repeat	1	44	(0)	4040152
355	28.7	2.7	0.0	chr9	22124835	22124942	(116269775)	+	MARNA	DNA/TcMar-Mariner	11	121	(465)	4040160
18	17.6	0.0	0.0	chr9	22125001	22125032	(116269685)	+	(TC)n	Simple_repeat	1	32	(0)	4040161
241	29.0	3.1	0.0	chr9	23175679	23175740	(115218977)	C	MIR3	SINE/MIR	(66)	142	79	4041459
61	0.0	0.0	0.0	chr9	23175791	23175842	(115218875)	+	(GA)n	Simple_repeat	1	52	(0)	4041460
1409	15.0	6.4	0.4	chr9	23175857	23176104	(115218613)	C	MLT2D	LTR/ERVL	(150)	264	1	4041461
70	4.5	3.2	1.0	chr9	23850730	23850822	(114543895)	+	(TC)n	Simple_repeat	1	96	(0)	4042354
20	4.2	0.0	0.0	chr9	23850842	23850866	(114543851)	+	(CA)n	Simple_repeat	1	25	(0)	4042355
17	16.9	0.0	0.0	chr9	24694403	24694436	(113700281)	+	(TCCA)n	Simple_repeat	1	34	(0)	4043416
46	2.3	0.0	0.0	chr9	24694462	24694505	(113700212)	+	(AG)n	Simple_repeat	1	44	(0)	4043417
3054	11.2	0.4	5.0	chr9	27080853	27081333	(111313384)	+	LTR71A	LTR/ERV1	1	459	(0)	4046616
1115	19.5	13.4	22.4	chr9	32338932	32339539	(106055178)	+	MLT2B3	LTR/ERVL	3	547	(7)	4053520
6247	13.2	1.0	1.1	chr9	33514868	33515836	(104878881)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	4055597
33	7.5	0.0	0.0	chr9	33632481	33632522	(104762195)	+	(TC)n	Simple_repeat	1	42	(0)	4055771
47	0.0	0.0	0.0	chr9	33859761	33859800	(104534917)	+	(TG)n	Simple_repeat	1	40	(0)	4056147
17	0.0	0.0	0.0	chr9	33859801	33859819	(104534898)	+	(AG)n	Simple_repeat	1	19	(0)	4056148
1830	18.1	0.4	2.1	chr9	33859820	33860106	(104534611)	C	AluJr	SINE/Alu	(30)	282	1	4056149
19	3.8	0.0	0.0	chr9	33877797	33877823	(104516894)	+	(CTGT)n	Simple_repeat	1	27	(0)	4056197
30	0.0	0.0	0.0	chr9	33877824	33877849	(104516868)	+	(TC)n	Simple_repeat	1	26	(0)	4056198
1521	10.6	0.0	0.5	chr9	33877864	33878052	(104516665)	C	AluSx1	SINE/Alu	(120)	192	5	4056199
1666	16.7	3.8	3.8	chr9	33883880	33884167	(104510550)	+	AluJb	SINE/Alu	1	288	(24)	4056216
43	0.0	0.0	0.0	chr9	33884199	33884235	(104510482)	+	(TC)n	Simple_repeat	1	37	(0)	4056217
924	12.4	0.8	0.0	chr9	33900738	33900866	(104493851)	C	AluJr4	SINE/Alu	(181)	131	2	4056259
40	8.5	0.0	1.6	chr9	33900910	33900973	(104493744)	+	(TCTCTG)n	Simple_repeat	1	64	(0)	4056260
885	20.3	1.3	0.0	chr9	33900974	33901121	(104493596)	C	AluJb	SINE/Alu	(28)	284	135	4056261
14481	11.9	4.2	3.0	chr9	34213530	34215697	(104179020)	+	L1PA10	LINE/L1	4010	6167	(1)	4057010
1864	15.3	0.0	1.8	chr9	34420693	34420973	(103973744)	+	AluJb	SINE/Alu	1	276	(36)	4057405
30	2.9	0.0	0.0	chr9	34420974	34421009	(103973708)	+	(GT)n	Simple_repeat	1	36	(0)	4057406
42	0.0	0.0	0.0	chr9	34421010	34421045	(103973672)	+	(GA)n	Simple_repeat	1	36	(0)	4057407
14	6.0	11.4	0.0	chr9	34637661	34637695	(103757022)	+	(CGGCCCA)n	Simple_repeat	1	39	(0)	4057709
12	19.3	6.1	5.7	chr9	34637696	34637723	(103756994)	+	(GCACGGC)n	Simple_repeat	4	70	(0)	4057710
44	0.0	0.0	0.0	chr9	35647668	35647705	(102747012)	+	(GA)n	Simple_repeat	1	38	(0)	4059224
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
1001	29.2	17.5	10.0	chr9	35769386	35770492	(102624225)	C	L2c	LINE/L2	(0)	3426	2281	4059393
55	0.0	0.0	0.0	chr9	35770493	35770539	(102624178)	+	(GA)n	Simple_repeat	1	47	(0)	4059394
1001	30.3	9.4	12.9	chr9	35770540	35770682	(102624035)	C	L2c	LINE/L2	(1139)	2280	2124	4059393
292	28.8	7.0	14.5	chr9	35945808	35946055	(102448662)	C	LTR50	LTR/ERVL	(567)	228	1	4059675
397	29.1	11.7	4.7	chr9	35946060	35946353	(102448364)	C	L1M5	LINE/L1	(1279)	4867	4542	4059676
2819	9.5	5.8	7.4	chr9	36008100	36008372	(102386345)	+	Tigger2	DNA/TcMar-Tigger	2240	2482	(236)	4059772
47	0.0	0.0	0.0	chr9	36008373	36008412	(102386305)	+	(GA)n	Simple_repeat	1	40	(0)	4059773
1877	16.7	0.7	0.0	chr9	36008413	36008687	(102386030)	C	AluSx	SINE/Alu	(34)	278	2	4059774
42	0.0	0.0	0.0	chr9	36082153	36082188	(102312529)	+	(TC)n	Simple_repeat	1	36	(0)	4059920
1551	18.9	7.5	0.0	chr9	36082190	36082459	(102312258)	C	AluSx4	SINE/Alu	(18)	292	1	4059921
101	16.4	3.6	4.9	chr9	36291048	36291321	(102103396)	+	(TTCT)n	Simple_repeat	1	284	(0)	4060342
663	20.7	0.0	0.0	chr9	36291322	36291432	(102103285)	C	AluJb	SINE/Alu	(0)	312	202	4060343
584	31.5	11.8	1.3	chr9	36928641	36929026	(101465691)	+	L4_C_Mam	LINE/RTE-X	4515	4946	(192)	4061721
36	15.0	0.0	0.0	chr9	36939774	36939833	(101454884)	+	GA-rich	Low_complexity	1	60	(0)	4061746
244	29.1	10.6	0.0	chr9	37485444	37485570	(100909147)	+	MER115	DNA/hAT-Tip100	252	393	(300)	4062762
369	26.9	2.9	5.0	chr9	37485575	37485715	(100909002)	+	MER115	DNA/hAT-Tip100	450	587	(106)	4062763
1675	20.1	6.1	0.8	chr9	38191246	38191617	(100203100)	C	MSTD	LTR/ERVL-MaLR	(2)	394	2	4064121
56	1.9	0.0	0.0	chr9	38191620	38191671	(100203046)	+	(TG)n	Simple_repeat	1	52	(0)	4064122
34	0.0	0.0	0.0	chr9	38191672	38191708	(100203009)	+	(AG)n	Simple_repeat	1	37	(0)	4064123
8104	6.6	0.4	2.1	chr9	41358049	41359305	(97035412)	+	SST1	Satellite/centr	1	1235	(327)	4068508
30	24.4	1.4	0.0	chr9	41359307	41359379	(97035338)	+	(TG)n	Simple_repeat	1	74	(0)	4068509
34	3.0	0.0	0.0	chr9	41359403	41359436	(97035281)	+	(TC)n	Simple_repeat	1	34	(0)	4068510
85	7.0	1.6	0.8	chr9	42030727	42030847	(96363870)	+	(GA)n	Simple_repeat	1	123	(0)	4069470
41	6.4	0.0	0.0	chr9	66270436	66270484	(72124233)	+	(GT)n	Simple_repeat	1	49	(0)	4077379
17	9.1	0.0	0.0	chr9	66270485	66270519	(72124198)	+	(CG)n	Simple_repeat	1	35	(0)	4077380
67	1.6	0.0	0.0	chr9	66270542	66270603	(72124114)	+	(TC)n	Simple_repeat	1	62	(0)	4077381
58	4.5	1.4	1.4	chr9	68423630	68423700	(69971017)	+	(TC)n	Simple_repeat	1	72	(0)	4079809
5688	13.1	2.1	2.5	chr9	68722687	68723179	(69671538)	C	L1MA4	LINE/L1	(13)	6287	5779	4080329
37	2.9	0.0	0.0	chr9	68723180	68723215	(69671502)	+	(GA)n	Simple_repeat	1	36	(0)	4080330
5688	14.0	1.6	6.0	chr9	68723216	68724775	(69669942)	C	L1MA4	LINE/L1	(522)	5778	4302	4080329
733	25.6	1.1	1.1	chr9	69134714	69134899	(69259818)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	189	4081074
52	1.4	8.1	0.0	chr9	69134923	69134996	(69259721)	+	(GA)n	Simple_repeat	1	80	(0)	4081075
1080	14.8	0.0	0.6	chr9	69135015	69135177	(69259540)	C	MLT1A	LTR/ERVL-MaLR	(212)	162	1	4081074
2368	8.7	0.7	0.0	chr9	70099693	70099980	(68294737)	+	AluSx1	SINE/Alu	1	290	(22)	4082613
51	0.0	0.0	0.0	chr9	70099981	70100024	(68294693)	+	(AG)n	Simple_repeat	1	44	(0)	4082614
634	30.1	8.9	1.3	chr9	70100138	70100376	(68294341)	C	MIRb	SINE/MIR	(1)	267	9	4082615
29	0.0	0.0	0.0	chr9	70746268	70746292	(67648425)	+	(AG)n	Simple_repeat	1	25	(0)	4083681
521	29.9	13.6	1.5	chr9	70746299	70746757	(67647960)	+	LTR84b	LTR/ERVL	241	757	(0)	4083682
78	25.6	2.6	1.7	chr9	70792453	70792686	(67602031)	+	GA-rich	Low_complexity	1	240	(0)	4083752
542	21.3	8.6	5.6	chr9	70792772	70792985	(67601732)	C	MER58D	DNA/hAT-Charlie	(0)	386	166	4083753
2190	17.3	5.1	4.4	chr9	71421019	71421032	(66973685)	+	MER34B	LTR/ERV1	60	72	(493)	4084624
2168	13.2	1.7	0.9	chr9	71421033	71421382	(66973335)	+	L1PA16	LINE/L1	5814	6166	(0)	4084625
753	33.5	7.5	5.2	chr9	71639450	71639878	(66754839)	+	L2	LINE/L2	1024	1464	(1955)	4084949
54	0.0	0.0	0.0	chr9	71639879	71639924	(66754793)	+	(TC)n	Simple_repeat	1	46	(0)	4084950
1838	17.3	0.0	2.8	chr9	71639925	71640213	(66754504)	C	AluJb	SINE/Alu	(31)	281	1	4084951
43	3.8	1.7	3.4	chr9	71692337	71692394	(66702323)	+	(TC)n	Simple_repeat	1	59	(0)	4085056
66	27.1	0.0	1.2	chr9	71756192	71756363	(66638354)	+	(TA)n	Simple_repeat	1	172	(0)	4085175
41	0.0	0.0	0.0	chr9	71756473	71756507	(66638210)	+	(CT)n	Simple_repeat	1	35	(0)	4085176
33	2.6	0.0	0.0	chr9	71756508	71756546	(66638171)	+	(AC)n	Simple_repeat	1	39	(0)	4085177
18	8.5	0.0	0.0	chr9	71756547	71756571	(66638146)	+	(AG)n	Simple_repeat	1	25	(0)	4085178
28	3.1	0.0	0.0	chr9	72417584	72417616	(65977101)	+	(TG)n	Simple_repeat	1	33	(0)	4086482
62	0.0	0.0	0.0	chr9	72417617	72417669	(65977048)	+	(GA)n	Simple_repeat	1	53	(0)	4086483
698	16.3	12.4	1.6	chr9	72417670	72417798	(65976919)	C	AluJr	SINE/Alu	(37)	275	131	4086484
40	4.9	0.0	0.0	chr9	72558143	72558185	(65836532)	+	(TC)n	Simple_repeat	1	43	(0)	4086778
1774	11.7	1.9	1.9	chr9	73434182	73434437	(64960280)	C	AluSq2	SINE/Alu	(15)	298	43	4088052
20	21.4	1.6	1.6	chr9	73434438	73434454	(64960263)	+	(CTT)n	Simple_repeat	1	16	(0)	4088053
58	7.3	4.5	0.0	chr9	73434461	73434548	(64960169)	+	(AG)n	Simple_repeat	1	92	(0)	4088054
86	4.5	0.0	0.0	chr9	75719835	75719925	(62674792)	+	(TC)n	Simple_repeat	1	91	(0)	4091360
486	27.1	3.0	3.7	chr9	75719926	75720059	(62674658)	C	MIR	SINE/MIR	(124)	138	6	4091353
100	2.2	0.0	0.0	chr9	76040320	76040413	(62354304)	+	(TC)n	Simple_repeat	1	94	(0)	4091863
324	24.4	3.2	0.0	chr9	76040459	76040548	(62354169)	+	MLT1N2	LTR/ERVL-MaLR	427	519	(43)	4091864
1951	14.5	1.4	5.1	chr9	76333930	76334300	(62060417)	C	THE1B	LTR/ERVL-MaLR	(7)	357	1	4092326
542	25.8	10.1	3.3	chr9	77010558	77010810	(61383907)	C	MLT1H2	LTR/ERVL-MaLR	(0)	569	302	4093551
23	25.9	1.5	1.5	chr9	77010825	77010890	(61383827)	+	(TC)n	Simple_repeat	1	67	(0)	4093552
24	18.7	1.8	0.0	chr9	77210132	77210160	(61184557)	+	(CCCTC)n	Simple_repeat	1	29	(0)	4093960
39	6.9	4.8	0.0	chr9	77210161	77210222	(61184495)	+	(CT)n	Simple_repeat	1	65	(0)	4093961
24	18.7	1.8	0.0	chr9	77210223	77210250	(61184467)	+	(CCCTC)n	Simple_repeat	5	32	(0)	4093962
1454	16.4	2.9	6.6	chr9	77210252	77210537	(61184180)	C	AluJo	SINE/Alu	(31)	281	7	4093963
26	20.9	1.8	0.0	chr9	79257119	79257174	(59137543)	+	(CT)n	Simple_repeat	1	57	(0)	4096976
41	19.7	1.2	0.0	chr9	79681740	79681824	(58712893)	+	GA-rich	Low_complexity	1	86	(0)	4097589
50	2.2	0.0	0.0	chr9	79681833	79681879	(58712838)	+	(TG)n	Simple_repeat	1	47	(0)	4097590
258	26.7	1.6	0.0	chr9	81724588	81724647	(56670070)	+	UCON55	DNA/TcMar-Tigger	35	95	(97)	4100383
213	26.4	17.2	0.0	chr9	81724648	81724753	(56669964)	C	L3b	LINE/CR1	(283)	4949	4822	4100384
1817	17.9	3.0	3.6	chr9	82665609	82665972	(55728745)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	4101765
412	32.2	5.5	0.7	chr9	82829606	82829787	(55564930)	+	MIRb	SINE/MIR	49	255	(13)	4102002
38	6.4	0.0	0.0	chr9	82982785	82982833	(55411884)	+	(GA)n	Simple_repeat	1	49	(0)	4102220
821	17.7	2.8	9.1	chr9	83087211	83087405	(55307312)	+	MLT1A	LTR/ERVL-MaLR	1	181	(193)	4102355
44	2.4	0.0	0.0	chr9	83087406	83087447	(55307270)	+	(TC)n	Simple_repeat	1	42	(0)	4102356
821	17.7	2.8	9.1	chr9	83087448	83087481	(55307236)	+	MLT1A	LTR/ERVL-MaLR	182	215	(159)	4102355
3495	15.5	6.2	1.9	chr9	83087490	83088361	(55306356)	C	L1M4	LINE/L1	(2707)	3937	3115	4102357
34	0.0	5.6	0.0	chr9	83348228	83348263	(55046454)	+	(CT)n	Simple_repeat	1	38	(0)	4102730
1531	16.3	1.4	4.1	chr9	83348353	83348646	(55046071)	+	L1MB7	LINE/L1	5883	6168	(16)	4102731
819	28.2	15.0	6.5	chr9	83407614	83407837	(54986880)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	283	4102848
74	7.3	0.9	1.9	chr9	83407838	83407944	(54986773)	+	(TC)n	Simple_repeat	1	108	(0)	4102849
67	5.1	1.2	1.2	chr9	83416738	83416820	(54977897)	+	(TC)n	Simple_repeat	1	84	(0)	4102862
672	24.8	11.4	0.0	chr9	84181648	84181857	(54212860)	C	LTR16C	LTR/ERVL	(247)	242	6	4104204
28	0.0	0.0	0.0	chr9	84181902	84181932	(54212785)	+	(TG)n	Simple_repeat	1	31	(0)	4104205
50	0.0	0.0	0.0	chr9	84181933	84181975	(54212742)	+	(GA)n	Simple_repeat	1	43	(0)	4104206
45	1.8	3.3	1.6	chr9	84821800	84821859	(53572858)	+	(AG)n	Simple_repeat	1	62	(0)	4105296
47	15.4	0.0	0.0	chr9	84879137	84879215	(53515502)	+	GA-rich	Low_complexity	1	79	(0)	4105397
14	15.3	0.0	0.0	chr9	85941551	85941579	(52453138)	+	G-rich	Low_complexity	1	29	(0)	4107038
2079	20.6	7.4	5.1	chr9	86141747	86142299	(52252418)	C	MER34A	LTR/ERV1	(4)	567	1	4107396
32	18.2	0.0	0.0	chr9	86585774	86585836	(51808881)	+	GA-rich	Low_complexity	1	63	(0)	4108127
909	23.1	21.2	12.1	chr9	86592666	86593170	(51801547)	C	MLT1F1	LTR/ERVL-MaLR	(0)	560	13	4108139
1934	16.9	4.3	3.3	chr9	86923197	86923588	(51471129)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4108666
39	11.2	0.0	1.6	chr9	86955147	86955207	(51439510)	+	(AG)n	Simple_repeat	1	61	(0)	4108723
548	20.3	15.1	1.0	chr9	86955329	86955522	(51439195)	+	MER5C	DNA/hAT-Charlie	88	313	(0)	4108724
37	2.9	0.0	0.0	chr9	87109481	87109516	(51285201)	+	(AG)n	Simple_repeat	1	36	(0)	4108957
474	26.8	17.2	3.5	chr9	87379178	87379521	(51015196)	+	L1ME4b	LINE/L1	472	844	(48)	4109367
43	4.5	0.0	0.0	chr9	87379522	87379567	(51015150)	+	(TC)n	Simple_repeat	1	46	(0)	4109368
474	27.0	10.9	3.7	chr9	87379568	87379613	(51015104)	+	L1ME4b	LINE/L1	845	891	(1)	4109367
2237	7.2	0.0	1.8	chr9	87602618	87602895	(50791822)	C	AluSg	SINE/Alu	(1)	309	37	4109751
33	7.5	0.0	0.0	chr9	87602907	87602948	(50791769)	+	(TC)n	Simple_repeat	1	42	(0)	4109752
2332	16.2	6.3	0.2	chr9	88262532	88262964	(50131753)	C	LOR1b	LTR/ERV1	(0)	461	1	4110776
36	0.0	0.0	0.0	chr9	88263005	88263035	(50131682)	+	(TC)n	Simple_repeat	1	31	(0)	4110777
1850	15.4	0.0	1.1	chr9	88263036	88263315	(50131402)	C	AluJb	SINE/Alu	(25)	287	11	4110778
340	23.4	10.0	5.8	chr9	88577446	88577653	(49817064)	C	MLT1B	LTR/ERVL-MaLR	(17)	391	189	4111441
362	22.3	9.2	8.2	chr9	88577680	88577850	(49816867)	C	MLT1B	LTR/ERVL-MaLR	(217)	173	1	4111441
87	17.5	1.2	0.6	chr9	88752805	88752970	(49641747)	+	GA-rich	Low_complexity	1	168	(0)	4111681
59	0.0	0.0	0.0	chr9	88873078	88873127	(49521590)	+	(GA)n	Simple_repeat	1	50	(0)	4111838
156	30.0	3.8	2.0	chr9	88873244	88873580	(49521137)	+	GA-rich	Low_complexity	384	732	(0)	4111839
321	26.4	23.6	1.1	chr9	89524408	89524627	(48870090)	+	MLT1H1	LTR/ERVL-MaLR	2	271	(284)	4112601
165	20.1	3.1	0.5	chr9	89524636	89525019	(48869698)	+	GA-rich	Low_complexity	1	396	(0)	4112602
275	5.7	0.0	0.0	chr9	90007971	90008005	(48386712)	C	MLT2B1	LTR/ERVL	(0)	560	526	4113268
31	5.8	0.0	0.0	chr9	90008018	90008053	(48386664)	+	(TC)n	Simple_repeat	1	36	(0)	4113269
33	0.0	3.1	0.0	chr9	90008146	90008177	(48386540)	+	(GA)n	Simple_repeat	1	33	(0)	4113270
33	3.1	0.0	0.0	chr9	90008180	90008212	(48386505)	+	(TG)n	Simple_repeat	1	33	(0)	4113271
1926	21.4	5.4	0.9	chr9	90008219	90008661	(48386056)	C	MLT2B1	LTR/ERVL	(56)	464	1	4113268
81	2.6	0.0	0.0	chr9	90183311	90183388	(48211329)	+	(TC)n	Simple_repeat	1	78	(0)	4113519
30	5.2	0.0	2.4	chr9	90183389	90183430	(48211287)	+	(AC)n	Simple_repeat	1	42	(0)	4113520
49	0.0	0.0	0.0	chr9	91100132	91100173	(47294544)	+	(TC)n	Simple_repeat	1	42	(0)	4114698
2459	12.9	0.0	0.0	chr9	91621931	91622240	(46772477)	+	AluSg	SINE/Alu	1	310	(0)	4115495
1143	21.8	2.7	6.0	chr9	91622241	91622264	(46772453)	+	L1MEc	LINE/L1	4345	4369	(1950)	4115493
89	15.1	0.0	2.9	chr9	91622265	91622434	(46772283)	+	A-rich	Low_complexity	1	170	(0)	4115496
50	1.9	3.7	0.0	chr9	91771685	91771738	(46622979)	+	(TC)n	Simple_repeat	1	56	(0)	4115725
31	9.8	0.0	0.0	chr9	92865029	92865072	(45529645)	+	(AG)n	Simple_repeat	1	44	(0)	4117330
587	29.6	2.1	7.5	chr9	92865121	92865157	(45529560)	+	L1MEf	LINE/L1	6348	6379	(886)	4117321
1006	13.0	0.8	0.0	chr9	92865158	92865288	(45529429)	+	AluJo	SINE/Alu	1	132	(180)	4117331
409	26.2	2.3	1.6	chr9	93468748	93468875	(44925842)	C	L1ME4c	LINE/L1	(373)	457	329	4118217
5190	14.5	7.1	3.1	chr9	93607583	93607872	(44786845)	C	L1MC1	LINE/L1	(1545)	5019	4687	4118367
69	18.4	2.5	2.4	chr9	93607895	93608056	(44786661)	+	GA-rich	Low_complexity	1	166	(0)	4118371
640	15.5	2.5	0.0	chr9	93608078	93608193	(44786524)	C	L1MC1	LINE/L1	(1978)	4586	4468	4118367
1351	22.5	6.4	4.5	chr9	93877995	93878136	(44516581)	+	MLT1B	LTR/ERVL-MaLR	33	180	(210)	4118678
55	6.0	0.0	2.7	chr9	93878137	93878210	(44516507)	+	(TC)n	Simple_repeat	1	74	(0)	4118680
1351	22.5	6.4	4.5	chr9	93878211	93878417	(44516300)	+	MLT1B	LTR/ERVL-MaLR	181	389	(1)	4118678
50	5.9	7.8	0.0	chr9	94616865	94616954	(43777763)	+	(CT)n	Simple_repeat	1	97	(0)	4119938
953	29.0	6.8	1.3	chr9	94617060	94617377	(43777340)	C	MER58B	DNA/hAT-Charlie	(0)	341	5	4119939
12	21.6	0.0	0.0	chr9	95506649	95506680	(42888037)	+	(CGCGCC)n	Simple_repeat	1	32	(0)	4121301
28	24.6	0.0	0.0	chr9	95508033	95508095	(42886622)	+	(GT)n	Simple_repeat	1	63	(0)	4121304
17	3.5	3.2	3.1	chr9	95509243	95509273	(42885444)	+	(GAGGG)n	Simple_repeat	1	32	(0)	4121307
238	26.0	6.4	0.0	chr9	95580879	95580951	(42813766)	+	MER136	DNA	108	185	(133)	4121421
329	30.5	4.4	6.8	chr9	95581013	95581174	(42813543)	+	X6A_LINE	LINE/CR1	629	786	(294)	4121422
28	23.9	3.5	2.3	chr9	95584672	95584756	(42809961)	+	GA-rich	Low_complexity	1	88	(0)	4121428
40	0.0	0.0	0.0	chr9	96131599	96131632	(42263085)	+	(CT)n	Simple_repeat	1	34	(0)	4122266
1530	16.7	10.9	0.8	chr9	96131662	96131925	(42262792)	+	AluJb	SINE/Alu	1	294	(18)	4122267
44	6.2	0.0	0.0	chr9	96162086	96162136	(42232581)	+	(CT)n	Simple_repeat	1	51	(0)	4122332
302	32.8	19.2	2.4	chr9	96162159	96162495	(42232222)	C	L3	LINE/CR1	(1399)	2700	2294	4122330
15	13.7	0.0	2.9	chr9	97803548	97803581	(40591136)	+	(CCGCCC)n	Simple_repeat	1	34	(0)	4125171
269	29.9	5.9	4.6	chr9	97803899	97804115	(40590602)	+	MIRb	SINE/MIR	40	259	(9)	4125172
12	5.5	0.0	0.0	chr9	97853932	97853950	(40540767)	+	(GCC)n	Simple_repeat	1	19	(0)	4125273
45	2.4	0.0	0.0	chr9	98618487	98618529	(39776188)	+	(TC)n	Simple_repeat	1	43	(0)	4126865
3664	22.9	11.6	4.7	chr9	98856536	98857537	(39537180)	C	MLT1E1-int	LTR/ERVL-MaLR	(5)	1484	414	4127354
41	0.0	0.0	0.0	chr9	98857538	98857572	(39537145)	+	(CT)n	Simple_repeat	1	35	(0)	4127355
3664	23.3	10.5	5.8	chr9	98857573	98857674	(39537043)	C	MLT1E1-int	LTR/ERVL-MaLR	(1076)	413	324	4127354
1381	14.0	3.2	0.4	chr9	98878168	98878192	(39516525)	+	Tigger7	DNA/TcMar-Tigger	2233	2258	(233)	4127402
47	2.3	0.0	0.0	chr9	98878193	98878237	(39516480)	+	(GA)n	Simple_repeat	1	45	(0)	4127403
1381	14.0	3.2	0.4	chr9	98878238	98878455	(39516262)	+	Tigger7	DNA/TcMar-Tigger	2259	2482	(9)	4127402
53	24.2	5.9	5.0	chr9	99244742	99245027	(39149690)	+	GA-rich	Low_complexity	1	303	(0)	4128075
2081	13.5	13.6	0.3	chr9	99614327	99614505	(38780212)	+	MSTA	LTR/ERVL-MaLR	1	219	(209)	4128805
79	4.9	2.8	1.8	chr9	99614506	99614614	(38780103)	+	(TC)n	Simple_repeat	1	112	(0)	4128806
2081	13.5	13.6	0.3	chr9	99614615	99614805	(38779912)	+	MSTA	LTR/ERVL-MaLR	220	428	(0)	4128805
30	0.0	0.0	0.0	chr9	99883659	99883684	(38511033)	+	(TC)n	Simple_repeat	1	26	(0)	4129244
40	20.8	4.0	4.2	chr9	101552544	101552725	(36841992)	+	GA-rich	Low_complexity	1	181	(0)	4131865
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
40	2.6	0.0	0.0	chr9	105883601	105883639	(32511078)	+	(TC)n	Simple_repeat	1	39	(0)	4138160
382	19.0	2.5	1.2	chr9	105883670	105883749	(32510968)	+	L2b	LINE/L2	3288	3368	(7)	4138161
57	0.0	0.0	0.0	chr9	106616705	106616753	(31777964)	+	(GA)n	Simple_repeat	1	49	(0)	4139265
77	12.9	3.7	0.0	chr9	106863000	106863135	(31531582)	+	GA-rich	Low_complexity	1	141	(0)	4139694
85	1.3	0.0	0.0	chr9	106864040	106864116	(31530601)	+	(CT)n	Simple_repeat	1	77	(0)	4139698
17	16.4	0.0	0.0	chr9	106864157	106864190	(31530527)	+	(GCT)n	Simple_repeat	1	34	(0)	4139699
1555	20.2	3.5	4.8	chr9	107356315	107356338	(31038379)	+	MLT1A	LTR/ERVL-MaLR	161	183	(191)	4140494
56	1.9	0.0	0.0	chr9	107356339	107356390	(31038327)	+	(TC)n	Simple_repeat	1	52	(0)	4140496
1555	20.2	3.5	4.8	chr9	107356391	107356577	(31038140)	+	MLT1A	LTR/ERVL-MaLR	184	373	(1)	4140494
2510	7.4	0.0	0.0	chr9	108449802	108450098	(29944619)	+	AluY	SINE/Alu	1	297	(14)	4142743
52	7.5	1.4	0.0	chr9	108450099	108450170	(29944547)	+	(GA)n	Simple_repeat	1	73	(0)	4142744
451	26.4	7.1	0.8	chr9	108450172	108450287	(29944430)	C	L2a	LINE/L2	(18)	3408	3231	4142745
251	33.3	8.8	2.6	chr9	108450277	108450393	(29944324)	+	MIR3	SINE/MIR	81	205	(3)	4142746
40	0.0	0.0	0.0	chr9	110296411	110296444	(28098273)	+	(TC)n	Simple_repeat	1	34	(0)	4146047
1974	10.4	3.0	0.0	chr9	110296454	110296712	(28098005)	C	AluSx	SINE/Alu	(40)	272	6	4146048
24	16.9	8.2	0.0	chr9	110579750	110579810	(27814907)	+	(CT)n	Simple_repeat	1	66	(0)	4146503
16	29.8	5.1	1.9	chr9	110579855	110579952	(27814765)	+	(TCTCCC)n	Simple_repeat	1	103	(0)	4146504
27	8.0	0.0	0.0	chr9	111468618	111468657	(26926060)	+	(AGAG)n	Simple_repeat	1	40	(0)	4147899
3966	16.5	2.3	2.4	chr9	111481531	111482133	(26912584)	+	L1MB3	LINE/L1	5584	6183	(0)	4147929
23	0.0	0.0	0.0	chr9	111561086	111561110	(26833607)	+	(TA)n	Simple_repeat	1	25	(0)	4148103
79	2.6	1.2	0.0	chr9	111561111	111561190	(26833527)	+	(AG)n	Simple_repeat	1	81	(0)	4148104
253	22.5	5.3	13.5	chr9	111561191	111561261	(26833456)	C	L1P4	LINE/L1	(1609)	4537	4480	4148105
1704	17.7	4.5	0.7	chr9	111561262	111561561	(26833156)	C	AluJo	SINE/Alu	(0)	312	1	4148106
317	23.3	12.0	7.2	chr9	111961520	111961630	(26433087)	C	L1MD	LINE/L1	(2880)	3266	3150	4148883
270	27.4	1.6	0.0	chr9	111961710	111961771	(26432946)	C	L2b	LINE/L2	(0)	3375	3313	4148884
1013	20.4	1.0	4.6	chr9	111961785	111962000	(26432717)	C	MER63A	DNA/hAT-Blackjack	(2)	208	1	4148885
50	2.2	0.0	0.0	chr9	112099016	112099062	(26295655)	+	(TC)n	Simple_repeat	1	47	(0)	4149154
1723	15.1	4.9	1.8	chr9	112099063	112099340	(26295377)	C	AluJr	SINE/Alu	(25)	287	1	4149155
1731	18.6	0.3	2.2	chr9	112189344	112189358	(26205359)	C	AluJb	SINE/Alu	(1)	311	297	4149340
45	2.4	0.0	0.0	chr9	112189359	112189401	(26205316)	+	(TC)n	Simple_repeat	1	43	(0)	4149341
1731	18.6	0.3	2.2	chr9	112189402	112189702	(26205015)	C	AluJb	SINE/Alu	(16)	296	1	4149340
831	18.0	0.0	0.0	chr9	112562833	112562960	(25831757)	C	FLAM_C	SINE/Alu	(10)	133	6	4150109
53	5.3	0.0	0.0	chr9	112563028	112563086	(25831631)	+	(TC)n	Simple_repeat	1	59	(0)	4150110
74	24.8	2.0	3.6	chr9	113381166	113381381	(25013336)	+	(TTTC)n	Simple_repeat	1	213	(0)	4151557
43	8.8	0.0	0.0	chr9	113381382	113381443	(25013274)	+	(TCCC)n	Simple_repeat	1	62	(0)	4151558
2345	10.5	0.3	0.0	chr9	113381444	113381759	(25012958)	C	AluSq2	SINE/Alu	(0)	313	1	4151559
100	15.7	0.9	3.7	chr9	113737972	113737985	(24656732)	+	(TCCT)n	Simple_repeat	1	14	(0)	4152292
56	9.7	2.2	0.0	chr9	113737986	113738076	(24656641)	+	(TC)n	Simple_repeat	1	93	(0)	4152293
100	15.7	0.9	3.7	chr9	113738077	113738276	(24656441)	+	(TCCT)n	Simple_repeat	3	196	(0)	4152294
613	30.2	7.2	1.6	chr9	113884516	113884700	(24510017)	C	MER117	DNA/hAT-Charlie	(0)	197	2	4152576
47	2.3	0.0	0.0	chr9	113884775	113884819	(24509898)	+	(AG)n	Simple_repeat	1	45	(0)	4152577
369	26.2	4.5	6.1	chr9	113884820	113884933	(24509784)	C	MIR3	SINE/MIR	(82)	126	15	4152578
295	23.0	2.9	6.5	chr9	113884954	113885060	(24509657)	C	UCON34	Unknown	(7)	118	16	4152579
1039	24.9	10.1	8.6	chr9	113889050	113889317	(24505400)	C	MLT1G3	LTR/ERVL-MaLR	(13)	582	307	4152589
35	7.0	0.0	0.0	chr9	113889318	113889363	(24505354)	+	(TCTCTC)n	Simple_repeat	1	46	(0)	4152590
1039	24.9	10.5	8.8	chr9	113889364	113889666	(24505051)	C	MLT1G3	LTR/ERVL-MaLR	(289)	306	13	4152589
1984	9.2	8.4	0.0	chr9	114033128	114033389	(24361328)	+	AluSx1	SINE/Alu	1	286	(26)	4152835
37	0.0	0.0	0.0	chr9	114033390	114033421	(24361296)	+	(AG)n	Simple_repeat	1	32	(0)	4152836
16	26.2	1.3	5.3	chr9	114611397	114611471	(23783246)	+	G-rich	Low_complexity	1	76	(0)	4154052
243	10.8	2.6	0.0	chr9	114689865	114689901	(23704816)	C	MLT2B1	LTR/ERVL	(0)	556	519	4154236
1421	21.6	8.5	2.5	chr9	114717964	114718136	(23676581)	+	MLT1B	LTR/ERVL-MaLR	1	201	(189)	4154295
62	4.5	6.5	0.0	chr9	114718137	114718228	(23676489)	+	(TC)n	Simple_repeat	1	98	(0)	4154296
1421	21.6	8.5	2.5	chr9	114718229	114718420	(23676297)	+	MLT1B	LTR/ERVL-MaLR	202	390	(0)	4154295
608	33.1	9.3	2.1	chr9	115265501	115265889	(23128828)	C	LTR16E1	LTR/ERVL	(118)	420	1	4155310
53	0.0	0.0	0.0	chr9	115266005	115266049	(23128668)	+	(TC)n	Simple_repeat	1	45	(0)	4155311
27	3.2	0.0	0.0	chr9	115266050	115266081	(23128636)	+	(GT)n	Simple_repeat	1	32	(0)	4155312
78	24.2	1.9	1.4	chr9	116446097	116446309	(21948408)	+	GA-rich	Low_complexity	1	217	(0)	4157408
268	30.2	6.3	4.0	chr9	116446446	116446569	(21948148)	C	MIR3	SINE/MIR	(62)	146	20	4157409
699	18.1	13.0	2.4	chr9	117187972	117188135	(21206582)	C	MER20	DNA/hAT-Charlie	(0)	219	36	4158955
16	5.2	0.0	0.0	chr9	117188145	117188164	(21206553)	+	(TG)n	Simple_repeat	1	20	(0)	4158956
49	2.2	0.0	0.0	chr9	117188167	117188212	(21206505)	+	(AG)n	Simple_repeat	1	46	(0)	4158957
516	26.1	4.0	6.9	chr9	120581515	120581785	(17812932)	+	L2a	LINE/L2	3144	3426	(0)	4165287
186	18.0	3.9	9.1	chr9	120581803	120581857	(17812860)	+	MIRb	SINE/MIR	148	199	(69)	4165288
31	5.8	0.0	0.0	chr9	120581910	120581945	(17812772)	+	(TC)n	Simple_repeat	1	36	(0)	4165289
434	34.9	5.7	2.5	chr9	121641801	121642087	(16752630)	C	L1MC4	LINE/L1	(4986)	1229	942	4167436
1376	13.3	0.9	3.4	chr9	122051373	122051605	(16343112)	+	MER73	LTR/ERVL	1	227	(417)	4168195
29	7.5	2.4	0.0	chr9	122051612	122051653	(16343064)	+	(TC)n	Simple_repeat	1	43	(0)	4168196
1640	15.3	6.0	0.0	chr9	122051655	122051935	(16342782)	+	MER73	LTR/ERVL	344	642	(2)	4168195
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
37	23.6	1.1	0.0	chr9	123064027	123064120	(15330597)	+	(CTCT)n	Simple_repeat	1	95	(0)	4170044
409	30.7	18.7	0.5	chr9	123315557	123315786	(15078931)	+	MLT1K	LTR/ERVL-MaLR	4	275	(320)	4170482
33	0.0	0.0	0.0	chr9	123315881	123315908	(15078809)	+	(GA)n	Simple_repeat	1	28	(0)	4170483
72	6.8	0.0	0.0	chr9	123551977	123552069	(14842648)	+	(GA)n	Simple_repeat	1	93	(0)	4170911
2443	9.8	0.3	0.0	chr9	123627463	123627758	(14766959)	+	AluSc8	SINE/Alu	4	300	(11)	4171039
27	8.7	0.0	0.0	chr9	123627759	123627795	(14766922)	+	(GA)n	Simple_repeat	1	37	(0)	4171040
480	29.8	8.0	2.6	chr9	123627899	123628134	(14766583)	C	MIRc	SINE/MIR	(25)	243	1	4171041
423	24.9	15.3	4.7	chr9	123740638	123740806	(14653911)	C	MIRb	SINE/MIR	(15)	215	26	4171228
50	0.0	0.0	0.0	chr9	123740900	123740942	(14653775)	+	(GA)n	Simple_repeat	1	43	(0)	4171229
203	28.0	0.0	0.0	chr9	123740990	123741039	(14653678)	C	L2a	LINE/L2	(1)	3425	3376	4171230
30	3.5	0.0	0.0	chr9	124002945	124002974	(14391743)	+	(TC)n	Simple_repeat	1	30	(0)	4171692
15	0.0	0.0	0.0	chr9	124002975	124002991	(14391726)	+	(AC)n	Simple_repeat	1	17	(0)	4171693
334	23.8	21.1	5.2	chr9	124089228	124089400	(14305317)	+	MIRb	SINE/MIR	1	208	(60)	4171885
54	26.1	2.8	4.0	chr9	124503990	124504205	(13890512)	+	GA-rich	Low_complexity	1	222	(0)	4172702
36	28.0	3.0	4.1	chr9	124511976	124512142	(13882575)	+	GA-rich	Low_complexity	1	172	(0)	4172721
14	13.7	3.1	0.0	chr9	124512166	124512197	(13882520)	+	(GAGGTG)n	Simple_repeat	1	33	(0)	4172722
1723	17.5	0.0	4.7	chr9	124611454	124611750	(13782967)	+	AluJr	SINE/Alu	1	283	(29)	4172905
38	8.1	0.0	0.0	chr9	124611751	124611802	(13782915)	+	(GA)n	Simple_repeat	1	52	(0)	4172906
220	30.6	13.5	6.0	chr9	124611827	124612010	(13782707)	C	L2b	LINE/L2	(23)	3352	3153	4172907
212	20.3	3.2	2.9	chr9	124828768	124829327	(13565390)	+	(CTTT)n	Simple_repeat	1	578	(0)	4173330
230	25.5	4.7	1.9	chr9	124829328	124829431	(13565286)	+	SVA_A	Retroposon/SVA	1	107	(1280)	4173331
37	0.0	0.0	0.0	chr9	125156745	125156776	(13237941)	+	(CT)n	Simple_repeat	1	32	(0)	4174010
2140	8.1	1.7	5.2	chr9	125156816	125156981	(13237736)	C	AluSx1	SINE/Alu	(15)	297	144	4174011
15	0.0	0.0	0.0	chr9	125542055	125542071	(12852646)	+	(TC)n	Simple_repeat	1	17	(0)	4174868
15	12.0	0.0	0.0	chr9	125746549	125746575	(12648142)	+	(CGG)n	Simple_repeat	1	27	(0)	4175276
23	12.6	4.7	0.0	chr9	125915636	125915678	(12479039)	+	(CT)n	Simple_repeat	1	45	(0)	4175504
53	3.5	1.7	0.0	chr9	126378596	126378653	(12016064)	+	(TC)n	Simple_repeat	1	59	(0)	4176341
31	20.0	0.0	0.0	chr9	126651115	126651179	(11743538)	+	(CTCT)n	Simple_repeat	1	65	(0)	4176767
2089	13.8	4.5	0.0	chr9	127703169	127703466	(10691251)	+	AluSx	SINE/Alu	1	312	(0)	4178833
21	14.8	0.0	0.0	chr9	127703467	127703505	(10691212)	+	(GAGAAA)n	Simple_repeat	1	39	(0)	4178834
1255	28.9	6.8	7.7	chr9	127703540	127704123	(10690594)	C	L1M4b	LINE/L1	(6065)	802	225	4178835
17	9.7	2.9	2.8	chr9	128689312	128689346	(9705371)	+	(GCC)n	Simple_repeat	1	36	(0)	4181104
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
79	22.6	2.6	6.7	chr9	128774874	128775178	(9619539)	+	GA-rich	Low_complexity	1	313	(0)	4181298
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
16	16.6	4.2	8.0	chr9	129610534	129610605	(8784112)	+	(CGGAGG)n	Simple_repeat	1	75	(0)	4183245
447	28.9	9.7	1.3	chr9	129795423	129795729	(8598988)	C	L2a	LINE/L2	(12)	3414	3019	4183661
38	0.0	0.0	0.0	chr9	130190033	130190065	(8204652)	+	(AG)n	Simple_repeat	1	33	(0)	4184517
59	4.0	3.8	1.2	chr9	130221336	130221414	(8173303)	+	(AT)n	Simple_repeat	1	82	(0)	4184593
35	0.0	0.0	0.0	chr9	130221415	130221452	(8173265)	+	(GA)n	Simple_repeat	1	38	(0)	4184594
2011	12.6	1.1	0.0	chr9	130221454	130221731	(8172986)	C	AluSx1	SINE/Alu	(31)	281	1	4184595
256	36.1	5.8	5.8	chr9	130287587	130287777	(8106940)	+	L2b	LINE/L2	3180	3370	(5)	4184726
105	5.8	4.1	0.0	chr9	130334688	130334833	(8059884)	+	(TC)n	Simple_repeat	1	152	(0)	4184817
1132	19.3	6.2	0.0	chr9	130334854	130335050	(8059667)	C	AluJr	SINE/Alu	(17)	295	86	4184818
38	0.0	0.0	0.0	chr9	130542925	130542957	(7851760)	+	(GA)n	Simple_repeat	1	33	(0)	4185262
1097	21.5	4.0	0.0	chr9	130564079	130564315	(7830402)	+	MLT1E1A	LTR/ERVL-MaLR	432	678	(2)	4185332
38	2.8	0.0	0.0	chr9	130564410	130564446	(7830271)	+	(TC)n	Simple_repeat	1	37	(0)	4185333
913	14.9	1.2	8.1	chr9	130564453	130564626	(7830091)	+	FRAM	SINE/Alu	1	162	(14)	4185334
1869	25.7	5.9	1.7	chr9	130808832	130809362	(7585355)	+	L1MEc	LINE/L1	62	616	(5784)	4185847
43	0.0	0.0	0.0	chr9	130809382	130809418	(7585299)	+	(GA)n	Simple_repeat	1	37	(0)	4185848
17	0.0	0.0	0.0	chr9	130809419	130809437	(7585280)	+	(TG)n	Simple_repeat	1	19	(0)	4185849
1537	21.1	3.1	2.4	chr9	130809438	130809853	(7584864)	C	MLT2B4	LTR/ERVL	(40)	520	1	4185850
53	15.9	8.3	0.0	chr9	130835649	130835781	(7558936)	+	(TC)n	Simple_repeat	1	144	(0)	4185898
2474	7.7	0.3	0.6	chr9	130867946	130868256	(7526461)	C	AluY	SINE/Alu	(0)	311	2	4185954
1701	13.3	1.6	0.0	chr9	130868508	130868783	(7525934)	C	AluSx1	SINE/Alu	(0)	312	37	4185955
33	16.2	14.3	1.1	chr9	131394000	131394160	(7000557)	+	(GCGA)n	Simple_repeat	1	184	(0)	4187013
16	18.4	3.3	9.7	chr9	131394159	131394248	(7000469)	+	(GCCCC)n	Simple_repeat	1	93	(0)	4187014
44	27.0	0.0	0.8	chr9	132187531	132187647	(6207070)	+	GA-rich	Low_complexity	1	117	(0)	4188394
261	18.5	6.9	0.0	chr9	132216236	132216289	(6178428)	C	L2b	LINE/L2	(5)	3370	3313	4188454
339	26.1	9.0	0.0	chr9	132216295	132216405	(6178312)	C	MIR3	SINE/MIR	(81)	127	6	4188455
59	1.9	0.0	0.0	chr9	132216415	132216469	(6178248)	+	(TG)n	Simple_repeat	1	55	(0)	4188456
452	29.1	14.8	5.8	chr9	132752621	132753047	(5641670)	+	L2a	LINE/L2	2955	3426	(0)	4189446
54	15.1	1.0	1.0	chr9	132999464	132999560	(5395157)	+	GA-rich	Low_complexity	1	98	(0)	4189890
20	8.8	7.7	3.6	chr9	133375984	133376035	(5018682)	+	(GCTC)n	Simple_repeat	1	56	(0)	4190476
28	27.5	3.1	0.0	chr9	133523625	133523720	(4870997)	+	(AGAT)n	Simple_repeat	1	99	(0)	4190721
257	36.5	6.8	5.0	chr9	133563600	133563801	(4830916)	+	L3	LINE/CR1	3752	3957	(142)	4190773
285	31.9	13.6	1.0	chr9	133584631	133584823	(4809894)	C	L2c	LINE/L2	(160)	3215	2995	4190799
92	3.9	6.0	0.0	chr9	133657399	133657531	(4737186)	+	(AG)n	Simple_repeat	1	141	(0)	4190907
1834	19.5	5.4	5.1	chr9	133755781	133756104	(4638613)	C	MER54A	LTR/ERVL	(472)	429	109	4191047
102	28.2	2.0	1.7	chr9	134189348	134189691	(4205026)	+	GA-rich	Low_complexity	1	351	(0)	4191695
26	20.6	0.0	7.1	chr9	134276802	134276886	(4117831)	+	(CTCC)n	Simple_repeat	1	85	(0)	4191829
25	30.4	2.0	2.0	chr9	134276887	134276901	(4117816)	+	(CTCT)n	Simple_repeat	1	102	(0)	4191830
26	14.1	0.0	5.0	chr9	134326092	134326151	(4068566)	+	(GCCCCC)n	Simple_repeat	1	60	(0)	4191900
404	27.1	2.3	0.2	chr9	134599145	134600317	(3794400)	+	GA-rich	Low_complexity	1	1200	(0)	4192226
178	14.5	5.5	0.3	chr9	135084267	135084633	(3310084)	+	(CT)n	Simple_repeat	1	387	(0)	4192744
894	20.0	6.8	3.4	chr9	135191003	135191314	(3203403)	C	MLT1F1	LTR/ERVL-MaLR	(16)	553	179	4192879
28	8.4	0.0	0.0	chr9	135191317	135191354	(3203363)	+	(AG)n	Simple_repeat	1	38	(0)	4192880
236	20.3	0.0	5.5	chr9	135191355	135191427	(3203290)	C	MLT1F1	LTR/ERVL-MaLR	(339)	221	153	4192879
30	23.9	1.2	2.4	chr9	135287339	135287420	(3107297)	+	(TC)n	Simple_repeat	1	83	(0)	4192999
342	22.3	2.0	1.5	chr9	135287423	135287622	(3107095)	C	HERVIP10FH-int	LTR/ERV1	(4086)	1016	816	4193000
295	13.0	0.0	0.0	chr9	135291443	135291488	(3103229)	+	LTR18B	LTR/ERVL	221	266	(348)	4193006
24	32.3	2.3	0.0	chr9	135291496	135291581	(3103136)	+	GA-rich	Low_complexity	1	88	(0)	4193007
17428	19.3	3.1	1.6	chr9	135291686	135293327	(3101390)	+	HERVP71A-int	LTR/ERV1	3541	5217	(2373)	4193004
1303	29.6	8.4	3.3	chr9	135306382	135306476	(3088241)	C	L1MC4	LINE/L1	(6)	8036	7915	4193024
51	2.1	0.0	0.0	chr9	135306477	135306524	(3088193)	+	(TC)n	Simple_repeat	1	48	(0)	4193025
1303	29.6	8.4	3.3	chr9	135306525	135307039	(3087678)	C	L1MC4	LINE/L1	(128)	7914	7392	4193024
1824	17.7	4.4	2.5	chr9	135319916	135320138	(3074579)	+	MLT2B1	LTR/ERVL	1	230	(290)	4193043
56	0.0	0.0	0.0	chr9	135320139	135320186	(3074531)	+	(CT)n	Simple_repeat	1	48	(0)	4193044
1824	16.9	3.3	1.6	chr9	135320187	135320382	(3074335)	+	MLT2B1	LTR/ERVL	217	522	(40)	4193043
398	22.3	0.9	0.0	chr9	135726650	135727496	(2667221)	+	(TCTC)n	Simple_repeat	1	855	(0)	4193569
767	34.1	6.7	7.2	chr9	135732318	135732750	(2661967)	C	HAL1b	LINE/L1	(1179)	1242	784	4193577
38	0.0	4.5	2.2	chr9	135732751	135732794	(2661923)	+	(TC)n	Simple_repeat	1	46	(0)	4193580
767	34.1	6.7	7.2	chr9	135732795	135732827	(2661890)	C	HAL1b	LINE/L1	(1638)	783	752	4193577
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
19	14.1	2.6	0.0	chr9	136687298	136687336	(1707381)	+	(CAG)n	Simple_repeat	1	40	(0)	4194650
24	28.0	1.3	0.0	chr9	136687441	136687517	(1707200)	+	G-rich	Low_complexity	1	78	(0)	4194651
18	21.8	4.0	3.9	chr9	136712588	136712661	(1682056)	+	(GGCCG)n	Simple_repeat	1	77	(0)	4194709
293	12.4	1.4	0.0	chr9	136949908	136949983	(1444734)	C	AluJb	SINE/Alu	(52)	81	1	4195039
2135	9.8	0.4	0.0	chr9	136966552	136966826	(1427891)	+	AluSx1	SINE/Alu	3	278	(34)	4195058
55	0.0	0.0	0.0	chr9	136966827	136966873	(1427844)	+	(TC)n	Simple_repeat	1	47	(0)	4195059
40	0.0	0.0	0.0	chr9	136966874	136966917	(1427800)	+	(AT)n	Simple_repeat	1	44	(0)	4195060
18	18.7	3.9	3.7	chr9	137148724	137148775	(1245942)	+	GA-rich	Low_complexity	1	54	(0)	4195300
19	24.5	2.0	6.9	chr9	137148767	137148865	(1245852)	+	(CAGGA)n	Simple_repeat	1	101	(0)	4195301
14	22.1	4.3	0.0	chr9	137169838	137169884	(1224833)	+	(CCGAGG)n	Simple_repeat	1	49	(0)	4195323
18	7.7	0.0	0.0	chr9	137169887	137169914	(1224803)	+	(CAG)n	Simple_repeat	1	28	(0)	4195324
180	33.2	10.1	0.5	chr9	137254506	137254693	(1140024)	C	L2c	LINE/L2	(230)	3157	2950	4195390
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
348	24.4	0.6	0.0	chrX	258778	258882	(155782013)	+	L1MB5	LINE/L1	5732	5839	(605)	4358288
1005	25.6	12.2	4.6	chrX	259754	260167	(155780728)	+	LTR47A	LTR/ERVL	1	450	(2)	4358289
1573	14.5	0.0	9.6	chrX	278757	278907	(155761988)	C	MER4B	LTR/ERV1	(45)	565	415	4358317
3158	13.5	0.6	0.6	chrX	278908	279378	(155761517)	C	LTR7C	LTR/ERV1	(0)	471	1	4358319
14	28.5	2.0	0.0	chrX	318539	318589	(155722306)	+	(CTC)n	Simple_repeat	1	52	(0)	4358399
19	4.0	0.0	0.0	chrX	319240	319265	(155721630)	+	(CGG)n	Simple_repeat	1	26	(0)	4358400
1974	17.1	1.3	0.3	chrX	393376	393684	(155647211)	C	AluJr	SINE/Alu	(0)	312	1	4358497
2263	8.9	0.3	0.0	chrX	436009	436301	(155604594)	C	AluSx1	SINE/Alu	(18)	294	1	4358605
50	16.8	0.0	0.0	chrX	436369	436461	(155604434)	+	GA-rich	Low_complexity	1	93	(0)	4358606
21	7.5	0.0	0.0	chrX	508538	508565	(155532330)	+	(AG)n	Simple_repeat	1	28	(0)	4358764
46	0.0	0.0	0.0	chrX	620893	620931	(155419964)	+	(AG)n	Simple_repeat	1	39	(0)	4359013
497	11.6	3.7	0.0	chrX	622631	623471	(155417424)	+	GA-rich	Low_complexity	1	872	(0)	4359018
58	20.0	2.4	0.0	chrX	625449	625574	(155415321)	+	(CT)n	Simple_repeat	1	129	(0)	4359028
307	32.4	6.5	2.8	chrX	625577	625754	(155415141)	C	L1M4b	LINE/L1	(4982)	1885	1701	4359029
443	17.6	2.1	0.0	chrX	625755	626617	(155414278)	+	(TC)n	Simple_repeat	1	881	(0)	4359030
300	28.3	8.8	1.6	chrX	626619	626808	(155414087)	C	L1MEd	LINE/L1	(5899)	1187	983	4359031
144	18.3	1.8	0.0	chrX	626809	627092	(155413803)	+	(CT)n	Simple_repeat	1	289	(0)	4359032
306	31.1	7.9	1.9	chrX	628376	628706	(155412189)	C	L1MEd	LINE/L1	(5886)	1200	1001	4359033
66	13.7	0.0	0.0	chrX	681487	681590	(155359305)	+	(AG)n	Simple_repeat	1	104	(0)	4359152
304	34.8	10.8	5.0	chrX	681592	681990	(155358905)	+	HAL1	LINE/L1	853	1277	(1230)	4359153
47	19.0	0.9	1.9	chrX	681993	682099	(155358796)	+	GA-rich	Low_complexity	1	108	(0)	4359154
308	31.2	7.4	5.4	chrX	682101	682286	(155358609)	+	L1MEd	LINE/L1	995	1184	(5902)	4359155
94	17.3	0.6	0.0	chrX	682287	682407	(155358488)	+	GA-rich	Low_complexity	1	122	(0)	4359156
2530	5.8	0.0	1.3	chrX	682408	682716	(155358179)	+	AluYk2	SINE/Alu	1	305	(6)	4359157
384	24.3	0.7	0.1	chrX	882808	883710	(155157185)	+	GA-rich	Low_complexity	1	909	(0)	4359591
176	9.5	3.9	0.0	chrX	906213	906493	(155134402)	+	(GA)n	Simple_repeat	1	292	(0)	4359639
185	22.0	5.7	0.0	chrX	906502	906551	(155134344)	+	L3	LINE/CR1	863	915	(3184)	4359640
778	18.4	5.7	1.1	chrX	938683	940681	(155100214)	+	(TC)n	Simple_repeat	1	2112	(0)	4359728
458	30.6	0.0	5.8	chrX	940683	940890	(155100005)	+	MLT1B	LTR/ERVL-MaLR	184	379	(11)	4359729
66	15.2	3.7	1.4	chrX	942065	942200	(155098695)	+	GA-rich	Low_complexity	1	141	(0)	4359731
326	31.0	11.2	7.1	chrX	942203	942584	(155098311)	+	HAL1	LINE/L1	876	1275	(1232)	4359732
347	19.6	4.9	4.3	chrX	942585	943483	(155097412)	+	GA-rich	Low_complexity	1	904	(0)	4359733
57	0.0	0.0	0.0	chrX	1047697	1047745	(154993150)	+	(TC)n	Simple_repeat	1	49	(0)	4359999
257	16.2	3.0	0.0	chrX	1106032	1106525	(154934370)	+	GA-rich	Low_complexity	1	509	(0)	4360132
334	29.1	7.9	1.1	chrX	1106526	1106702	(154934193)	+	L1MEd	LINE/L1	995	1184	(5902)	4360133
134	20.8	0.7	0.0	chrX	1106705	1106983	(154933912)	+	GA-rich	Low_complexity	1	281	(0)	4360134
200	11.1	6.4	0.2	chrX	1151363	1151738	(154889157)	+	GA-rich	Low_complexity	1	400	(0)	4360266
2479	8.2	0.0	1.3	chrX	1159149	1159464	(154881431)	C	AluSx1	SINE/Alu	(0)	312	1	4360294
451	17.0	6.4	11.2	chrX	1159465	1159569	(154881326)	C	THE1C	LTR/ERVL-MaLR	(66)	315	176	4360293
46	13.9	0.0	0.0	chrX	1159570	1159648	(154881247)	+	(AGAGAG)n	Simple_repeat	1	79	(0)	4360295
301	33.6	3.0	3.0	chrX	1159649	1159780	(154881115)	+	L1M4	LINE/L1	1457	1588	(5929)	4360296
975	19.8	2.4	0.5	chrX	1160927	1161134	(154879761)	C	THE1C	LTR/ERVL-MaLR	(163)	212	1	4360293
2481	7.9	0.0	1.6	chrX	1247531	1247846	(154793049)	+	AluSp	SINE/Alu	2	312	(1)	4360527
139	22.6	0.0	1.3	chrX	1248023	1248340	(154792555)	+	G-rich	Low_complexity	1	318	(0)	4360528
2298	10.5	0.3	0.0	chrX	1306365	1306669	(154734226)	+	AluSp	SINE/Alu	1	306	(7)	4360676
155	30.6	3.0	0.9	chrX	1306670	1307000	(154733895)	+	GA-rich	Low_complexity	299	634	(0)	4360677
2247	16.8	0.0	4.2	chrX	1361778	1361973	(154678922)	C	THE1B	LTR/ERVL-MaLR	(180)	184	1	4360837
322	32.8	10.3	3.1	chrX	1361974	1362265	(154678630)	C	L1M4c	LINE/L1	(5119)	1265	950	4360836
40	20.0	1.2	0.0	chrX	1663189	1663305	(154377590)	+	(TC)n	Simple_repeat	1	118	(0)	4361503
1957	15.8	2.9	0.0	chrX	1663306	1663603	(154377292)	C	AluSx	SINE/Alu	(1)	311	5	4361504
450	11.5	3.7	2.8	chrX	1681476	1682358	(154358537)	+	(CTTTCT)n	Simple_repeat	1	916	(0)	4361555
6883	6.9	1.0	0.5	chrX	1682360	1683577	(154357318)	C	L1PA7	LINE/L1	(1)	6153	4933	4361556
2117	11.9	0.4	0.4	chrX	1853204	1853481	(154187414)	+	AluSx	SINE/Alu	1	278	(34)	4361982
16	12.2	0.0	0.0	chrX	1853482	1853503	(154187392)	+	(AG)n	Simple_repeat	2	23	(0)	4361983
415	34.3	10.2	1.6	chrX	1853504	1853752	(154187143)	+	L1MC4	LINE/L1	957	1229	(4986)	4361984
81	18.9	1.6	2.6	chrX	1853759	1853947	(154186948)	+	GA-rich	Low_complexity	1	192	(0)	4361985
163	24.4	4.6	0.0	chrX	1873616	1874090	(154166805)	+	(CT)n	Simple_repeat	1	497	(0)	4362032
83	20.5	2.1	1.0	chrX	2294695	2294884	(153746011)	+	GA-rich	Low_complexity	1	194	(0)	4362560
2267	10.8	0.0	0.0	chrX	2310792	2311087	(153729808)	+	AluSq2	SINE/Alu	14	309	(4)	4362592
343	30.4	10.6	6.7	chrX	2311088	2311255	(153729640)	+	L1M4c	LINE/L1	1124	1306	(5078)	4362591
2170	20.6	6.6	4.4	chrX	2502800	2503215	(153537680)	+	MER41D	LTR/ERV1	1	428	(129)	4362999
91	25.6	3.9	0.0	chrX	2508742	2508998	(153531897)	+	(TC)n	Simple_repeat	1	267	(0)	4363015
1569	17.7	0.7	3.5	chrX	2509008	2509168	(153531727)	C	AluJb	SINE/Alu	(37)	275	123	4363016
1845	19.6	0.0	0.0	chrX	2669098	2669398	(153371497)	C	AluJo	SINE/Alu	(11)	301	1	4363340
221	22.0	2.9	3.0	chrX	2669399	2669960	(153370935)	+	(CTAT)n	Simple_repeat	1	561	(0)	4363341
1328	16.4	3.2	0.5	chrX	2682871	2683084	(153357811)	+	AluJr	SINE/Alu	1	220	(92)	4363367
349	28.9	13.6	3.4	chrX	3075383	3075704	(152965191)	C	L1M4c	LINE/L1	(5067)	1317	958	4364187
230	28.6	1.0	1.0	chrX	3075707	3075847	(152965048)	+	(CTCT)n	Simple_repeat	1	142	(0)	4364188
37	8.0	6.2	1.2	chrX	3075848	3075928	(152964967)	+	(TC)n	Simple_repeat	1	86	(0)	4364189
230	28.6	1.0	1.0	chrX	3075929	3076488	(152964407)	+	(CTCT)n	Simple_repeat	3	561	(0)	4364190
304	31.9	1.0	8.2	chrX	4314478	4314663	(151726232)	+	L1MEg	LINE/L1	886	1058	(5026)	4366554
165	9.1	7.9	0.0	chrX	4314665	4314968	(151725927)	+	GA-rich	Low_complexity	1	328	(0)	4366556
822	21.1	1.4	5.0	chrX	4314969	4315159	(151725736)	C	MLT1A	LTR/ERVL-MaLR	(294)	171	2	4366552
70	8.4	2.0	0.0	chrX	4821881	4821981	(151218914)	+	(AG)n	Simple_repeat	1	103	(0)	4367444
33	8.9	2.0	0.0	chrX	4822067	4822115	(151218780)	+	(AG)n	Simple_repeat	1	50	(0)	4367445
144	21.7	4.4	0.8	chrX	5256886	5257269	(150783626)	+	GA-rich	Low_complexity	1	401	(0)	4368172
60	11.2	4.0	0.0	chrX	5611185	5611284	(150429611)	+	GA-rich	Low_complexity	1	104	(0)	4368768
202	35.4	2.4	7.3	chrX	5611285	5611461	(150429434)	C	L3	LINE/CR1	(25)	4074	3907	4368769
27	27.8	3.1	1.0	chrX	5832886	5832957	(150207938)	+	(CT)n	Simple_repeat	1	75	(0)	4369152
102	20.5	6.6	1.2	chrX	5833001	5833302	(150207593)	+	(CT)n	Simple_repeat	1	322	(0)	4369152
266	29.6	4.5	12.4	chrX	6999793	6999988	(149040907)	+	L1M5	LINE/L1	2868	3053	(3093)	4371080
31	18.4	1.6	0.0	chrX	7000097	7000158	(149040737)	+	GA-rich	Low_complexity	1	63	(0)	4371082
2297	28.0	8.7	5.5	chrX	7000247	7002290	(149038605)	+	L1ME3E	LINE/L1	3381	5493	(749)	4371083
63	0.0	0.0	0.0	chrX	7899627	7899680	(148141215)	+	(GA)n	Simple_repeat	1	54	(0)	4372364
2344	12.2	3.3	2.5	chrX	7899834	7900194	(148140701)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4372365
22	15.0	0.0	0.0	chrX	9526091	9526127	(146514768)	+	(GT)n	Simple_repeat	1	37	(0)	4374949
27	12.3	5.4	1.7	chrX	9526127	9526182	(146514713)	+	GA-rich	Low_complexity	1	59	(0)	4374950
44	0.0	0.0	0.0	chrX	10161125	10161162	(145879733)	+	(CT)n	Simple_repeat	1	38	(0)	4376033
66	5.7	0.0	0.0	chrX	10566498	10566571	(145474324)	+	(TC)n	Simple_repeat	1	74	(0)	4376673
1564	13.9	11.6	2.6	chrX	10571632	10571898	(145468997)	+	AluJb	SINE/Alu	1	294	(18)	4376679
384	35.1	10.0	3.2	chrX	10571899	10572055	(145468840)	C	L2c	LINE/L2	(130)	3257	3087	4376678
54	6.7	0.0	0.0	chrX	10572105	10572168	(145468727)	+	(CT)n	Simple_repeat	1	64	(0)	4376680
18	7.2	3.3	0.0	chrX	10572169	10572187	(145468708)	+	(AT)n	Simple_repeat	1	20	(0)	4376681
38	0.0	0.0	0.0	chrX	10572188	10572220	(145468675)	+	(AC)n	Simple_repeat	1	33	(0)	4376682
220	31.5	3.9	11.4	chrX	11673276	11673339	(144367556)	+	MIRb	SINE/MIR	30	94	(174)	4378403
35	0.0	0.0	0.0	chrX	11673340	11673369	(144367526)	+	(GA)n	Simple_repeat	1	30	(0)	4378404
224	27.6	1.9	3.0	chrX	11673370	11673444	(144367451)	+	MIRc	SINE/MIR	92	158	(110)	4378403
53	0.0	0.0	0.0	chrX	11810901	11810945	(144229950)	+	(TC)n	Simple_repeat	1	45	(0)	4378604
38	0.0	0.0	0.0	chrX	12130103	12130135	(143910760)	+	(AG)n	Simple_repeat	1	33	(0)	4379065
256	35.1	3.7	2.2	chrX	12130211	12130344	(143910551)	C	MLT1L	LTR/ERVL-MaLR	(124)	486	351	4379066
1994	17.1	0.0	0.0	chrX	12227519	12227811	(143813084)	+	AluJo	SINE/Alu	1	293	(19)	4379217
40	4.9	0.0	0.0	chrX	12227812	12227854	(143813041)	+	(AG)n	Simple_repeat	1	43	(0)	4379218
19	15.4	2.8	0.0	chrX	12227891	12227926	(143812969)	+	(TG)n	Simple_repeat	1	37	(0)	4379219
351	22.8	6.6	5.3	chrX	12320245	12320372	(143720523)	C	MIR3	SINE/MIR	(92)	176	35	4379370
331	8.4	6.3	1.8	chrX	12331593	12332208	(143708687)	+	(AT)n	Simple_repeat	1	655	(0)	4379389
34	0.0	0.0	0.0	chrX	12332208	12332244	(143708651)	+	(AG)n	Simple_repeat	1	37	(0)	4379390
47	0.0	0.0	0.0	chrX	13026095	13026134	(143014761)	+	(GA)n	Simple_repeat	1	40	(0)	4380500
18	23.8	3.8	3.7	chrX	13689321	13689399	(142351496)	+	G-rich	Low_complexity	1	82	(0)	4381610
2063	12.8	2.3	0.3	chrX	13961124	13961421	(142079474)	+	AluSz6	SINE/Alu	1	304	(8)	4382048
1713	18.3	15.4	1.8	chrX	13961422	13961662	(142079233)	+	MLT1D	LTR/ERVL-MaLR	193	505	(0)	4382047
254	30.4	11.8	7.8	chrX	14136492	14136658	(141904237)	C	MamRep605	LTR?	(319)	530	351	4382331
76	2.8	0.0	0.0	chrX	14136659	14136732	(141904163)	+	(GA)n	Simple_repeat	1	74	(0)	4382332
254	30.4	11.8	7.8	chrX	14136733	14136782	(141904113)	C	MamRep605	LTR?	(499)	350	303	4382331
1811	18.2	12.5	1.9	chrX	15026503	15026931	(141013964)	+	MLT2B2	LTR/ERVL	1	527	(40)	4383634
63	0.0	0.0	0.0	chrX	15026980	15027033	(141013862)	+	(TC)n	Simple_repeat	1	54	(0)	4383635
1915	26.6	9.9	2.7	chrX	15497502	15498476	(140542419)	C	L2a	LINE/L2	(100)	3326	2275	4384476
74	4.8	2.3	0.0	chrX	15498536	15498623	(140542272)	+	(CT)n	Simple_repeat	1	90	(0)	4384477
1099	18.1	1.4	3.1	chrX	15858359	15858581	(140182314)	+	MER20	DNA/hAT-Charlie	1	219	(0)	4385083
40	9.1	1.7	0.0	chrX	15858668	15858727	(140182168)	+	(TC)n	Simple_repeat	1	61	(0)	4385084
40	4.8	0.0	0.0	chrX	17600272	17600314	(138440581)	+	(GA)n	Simple_repeat	1	43	(0)	4388123
30	12.3	2.9	5.6	chrX	18066352	18066420	(137974475)	+	GA-rich	Low_complexity	1	71	(0)	4388857
707	13.0	23.0	0.0	chrX	18727988	18728148	(137312747)	C	MER21A	LTR/ERVL	(667)	264	56	4390066
46	4.3	0.0	0.0	chrX	18728157	18728204	(137312691)	+	(CT)n	Simple_repeat	1	48	(0)	4390067
2468	10.7	3.9	3.1	chrX	18728217	18728573	(137312322)	C	THE1B	LTR/ERVL-MaLR	(0)	364	5	4390068
73	0.0	0.0	0.0	chrX	19429761	19429822	(136611073)	+	(AG)n	Simple_repeat	1	62	(0)	4391333
855	25.7	16.2	1.3	chrX	19429895	19430034	(136610861)	+	L2a	LINE/L2	2617	2764	(655)	4391334
79	1.4	1.3	0.0	chrX	19760010	19760084	(136280811)	+	(TC)n	Simple_repeat	1	76	(0)	4391895
16	0.0	0.0	0.0	chrX	19760086	19760103	(136280792)	+	(AC)n	Simple_repeat	1	18	(0)	4391896
2322	9.7	0.0	0.0	chrX	19760106	19760394	(136280501)	+	AluY	SINE/Alu	1	289	(22)	4391897
100	22.2	5.8	0.7	chrX	19761144	19761434	(136279461)	+	GA-rich	Low_complexity	1	308	(0)	4391900
2397	8.6	2.2	0.0	chrX	20305038	20305341	(135735554)	C	AluSc8	SINE/Alu	(0)	311	1	4392912
36	2.9	0.0	0.0	chrX	20305386	20305420	(135735475)	+	(AG)n	Simple_repeat	1	35	(0)	4392913
2185	11.5	0.0	0.0	chrX	20449854	20450132	(135590763)	+	AluSz	SINE/Alu	2	280	(32)	4393187
47	1.8	3.3	3.2	chrX	20450135	20450195	(135590700)	+	(TC)n	Simple_repeat	1	63	(0)	4393188
1798	25.7	3.9	2.1	chrX	20450196	20450703	(135590192)	C	MLT1G1	LTR/ERVL-MaLR	(90)	489	1	4393186
126	15.4	0.5	0.9	chrX	20673821	20674042	(135366853)	+	(TTTC)n	Simple_repeat	1	223	(0)	4393542
1078	15.6	8.0	3.5	chrX	20674043	20674268	(135366627)	C	MER6A	DNA/TcMar-Tigger	(367)	238	2	4393539
53	2.0	0.0	0.0	chrX	20742657	20742706	(135298189)	+	(AG)n	Simple_repeat	1	50	(0)	4393648
692	24.8	6.9	3.8	chrX	20742764	20743128	(135297767)	C	HAL1	LINE/L1	(0)	2507	2131	4393649
23	14.0	0.0	0.0	chrX	21728173	21728213	(134312682)	+	(TCTCC)n	Simple_repeat	1	41	(0)	4394832
68	0.0	0.0	0.0	chrX	21728215	21728272	(134312623)	+	(TC)n	Simple_repeat	1	58	(0)	4394833
532	25.0	17.2	3.9	chrX	21839011	21839293	(134201602)	+	L1ME2	LINE/L1	5843	6163	(1)	4395015
35	0.0	0.0	0.0	chrX	22497541	22497582	(133543313)	+	(TATC)n	Simple_repeat	1	42	(0)	4396123
59	0.0	0.0	0.0	chrX	22497586	22497635	(133543260)	+	(TC)n	Simple_repeat	1	50	(0)	4396124
57	0.0	0.0	0.0	chrX	23166398	23166446	(132874449)	+	(TC)n	Simple_repeat	1	49	(0)	4397112
34	9.9	1.8	1.8	chrX	23166447	23166502	(132874393)	+	(GT)n	Simple_repeat	1	57	(0)	4397113
46	2.3	0.0	0.0	chrX	23742214	23742257	(132298638)	+	(GA)n	Simple_repeat	1	44	(0)	4397947
884	18.6	6.0	2.6	chrX	23793092	23793317	(132247578)	C	L1MC5	LINE/L1	(992)	8312	8079	4398077
446	27.5	16.4	3.8	chrX	24014893	24015157	(132025738)	+	MLT1O	LTR/ERVL-MaLR	234	538	(4)	4398596
72	6.2	0.0	0.0	chrX	24110470	24110555	(131930340)	+	(TCTC)n	Simple_repeat	1	86	(0)	4398835
1732	16.0	0.3	3.5	chrX	24110556	24110836	(131930059)	C	AluJo	SINE/Alu	(32)	280	1	4398834
2258	22.2	8.1	11.5	chrX	24144802	24145855	(131895040)	C	L1MC5	LINE/L1	(459)	8845	7965	4398937
1939	19.6	5.2	9.8	chrX	24154484	24154795	(131886100)	+	Charlie1b	DNA/hAT-Charlie	1	325	(198)	4398952
2403	9.5	3.4	0.6	chrX	24154796	24155143	(131885752)	+	L1PREC2	LINE/L1	5803	6160	(0)	4398953
276	21.1	8.4	2.6	chrX	24171684	24171761	(131869134)	C	MLT1O	LTR/ERVL-MaLR	(52)	490	408	4398991
48	0.0	4.2	0.0	chrX	24171895	24171942	(131868953)	+	(AG)n	Simple_repeat	1	50	(0)	4398992
1793	14.8	1.7	4.9	chrX	24173592	24173895	(131867000)	C	AluJb	SINE/Alu	(18)	294	1	4398994
35	17.1	7.0	0.9	chrX	24425521	24425546	(131615349)	+	(AGATAG)n	Simple_repeat	1	106	(0)	4399485
44	10.3	4.1	0.0	chrX	24425547	24425619	(131615276)	+	(GA)n	Simple_repeat	1	76	(0)	4399486
626	23.3	2.6	2.0	chrX	24425673	24425825	(131615070)	+	MIR	SINE/MIR	18	171	(91)	4399487
249	32.9	2.6	9.2	chrX	24425887	24426050	(131614845)	C	L2c	LINE/L2	(178)	3209	3057	4399488
1407	19.1	0.8	16.6	chrX	25285462	25285861	(130755034)	C	MSTD	LTR/ERVL-MaLR	(68)	328	1	4400923
1941	12.9	8.4	2.5	chrX	27547423	27547780	(128493115)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	4403982
1100	15.8	13.7	1.3	chrX	27547781	27547820	(128493075)	+	MSTA	LTR/ERVL-MaLR	171	210	(218)	4403981
91	3.4	0.0	0.0	chrX	27547821	27547911	(128492984)	+	(CT)n	Simple_repeat	1	91	(0)	4403983
1100	15.8	13.7	1.3	chrX	27547912	27548094	(128492801)	+	MSTA	LTR/ERVL-MaLR	211	425	(3)	4403981
118	12.9	0.0	2.0	chrX	30662671	30662870	(125378025)	+	(TTCT)n	Simple_repeat	1	200	(0)	4408598
2108	11.7	3.9	0.0	chrX	30662876	30663174	(125377721)	C	AluSq2	SINE/Alu	(2)	311	1	4408599
42	12.0	0.0	0.0	chrX	30868587	30868649	(125172246)	+	(AG)n	Simple_repeat	1	63	(0)	4408889
47	0.0	0.0	0.0	chrX	30977006	30977045	(125063850)	+	(GA)n	Simple_repeat	1	40	(0)	4409090
436	22.9	0.8	3.9	chrX	30977050	30977176	(125063719)	+	L1MC4	LINE/L1	7919	8041	(1)	4409082
483	25.9	9.0	0.0	chrX	31187527	31187688	(124853207)	C	MER103C	DNA/hAT-Charlie	(0)	297	120	4409384
83	0.0	0.0	0.0	chrX	31187718	31187788	(124853107)	+	(AG)n	Simple_repeat	1	71	(0)	4409385
569	31.1	1.4	1.9	chrX	31187809	31188018	(124852877)	+	Plat_L3	LINE/CR1	3237	3445	(141)	4409386
46	0.0	0.0	0.0	chrX	31522326	31522364	(124518531)	+	(TC)n	Simple_repeat	1	39	(0)	4409930
21	0.0	0.0	0.0	chrX	31522365	31522387	(124518508)	+	(AT)n	Simple_repeat	1	23	(0)	4409931
83	11.2	0.8	0.0	chrX	31833274	31833401	(124207494)	+	(GAGA)n	Simple_repeat	1	129	(0)	4410424
33	2.6	0.0	0.0	chrX	31889609	31889647	(124151248)	+	(TC)n	Simple_repeat	1	39	(0)	4410512
43	2.3	2.2	0.0	chrX	31889648	31889692	(124151203)	+	(CA)n	Simple_repeat	1	46	(0)	4410513
14	5.0	0.0	0.0	chrX	31889726	31889746	(124151149)	+	(CTCC)n	Simple_repeat	1	21	(0)	4410514
62	1.8	0.0	0.0	chrX	31943872	31943928	(124096967)	+	(AG)n	Simple_repeat	1	57	(0)	4410594
30	3.4	0.0	0.0	chrX	31988778	31988807	(124052088)	+	(TC)n	Simple_repeat	1	30	(0)	4410653
2171	21.6	4.2	1.6	chrX	31988818	31989306	(124051589)	C	MLT2B4	LTR/ERVL	(54)	502	1	4410654
18	14.0	3.1	0.0	chrX	32054057	32054088	(123986807)	+	(TG)n	Simple_repeat	1	33	(0)	4410742
57	0.0	1.9	0.0	chrX	32054089	32054140	(123986755)	+	(GA)n	Simple_repeat	1	53	(0)	4410743
1197	26.0	10.2	7.1	chrX	32238127	32238664	(123802231)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	13	4411022
33947	5.9	1.6	0.6	chrX	37480049	37484307	(118556588)	+	HERVIP10FH-int	LTR/ERV1	802	5102	(0)	4417452
36	2.9	0.0	0.0	chrX	37687159	37687193	(118353702)	+	(TC)n	Simple_repeat	1	35	(0)	4417776
23	3.7	0.0	0.0	chrX	38054584	38054611	(117986284)	+	(GT)n	Simple_repeat	1	28	(0)	4418359
40	0.0	0.0	0.0	chrX	38054612	38054645	(117986250)	+	(GA)n	Simple_repeat	1	34	(0)	4418360
1718	15.8	5.2	0.4	chrX	38054744	38055016	(117985879)	C	AluJo	SINE/Alu	(25)	287	1	4418361
726	20.9	14.6	0.0	chrX	38060360	38060546	(117980349)	+	L2a	LINE/L2	3208	3426	(0)	4418366
15	30.7	0.0	0.0	chrX	38060549	38060595	(117980300)	+	(ATGA)n	Simple_repeat	1	47	(0)	4418367
1453	23.2	5.9	6.4	chrX	38172562	38173059	(117867836)	C	LTR16A2	LTR/ERVL	(0)	495	1	4418538
53	0.0	0.0	0.0	chrX	38680540	38680584	(117360311)	+	(TC)n	Simple_repeat	1	45	(0)	4419341
29	0.0	0.0	0.0	chrX	38993129	38993160	(117047735)	+	(GT)n	Simple_repeat	1	32	(0)	4419855
43	0.0	0.0	0.0	chrX	38993161	38993197	(117047698)	+	(GA)n	Simple_repeat	1	37	(0)	4419856
336	26.5	10.5	4.1	chrX	38993318	38993501	(117047394)	C	MIR	SINE/MIR	(0)	262	72	4419857
45	6.0	0.0	0.0	chrX	39150370	39150421	(116890474)	+	(CT)n	Simple_repeat	1	52	(0)	4420068
155	21.3	4.8	3.0	chrX	39535562	39536065	(116504830)	+	(TC)n	Simple_repeat	1	528	(0)	4420706
47	0.0	0.0	0.0	chrX	39687505	39687544	(116353351)	+	(CT)n	Simple_repeat	1	40	(0)	4420981
14	20.2	0.0	0.0	chrX	39688908	39688943	(116351952)	+	(CCCTC)n	Simple_repeat	1	36	(0)	4420983
50	0.0	0.0	0.0	chrX	39936547	39936589	(116104306)	+	(TC)n	Simple_repeat	1	43	(0)	4421475
15	12.2	0.0	0.0	chrX	40097719	40097745	(115943150)	+	(TGTG)n	Simple_repeat	1	27	(0)	4421761
14	19.6	2.2	4.3	chrX	40097789	40097833	(115943062)	+	(CCG)n	Simple_repeat	1	46	(0)	4421762
329	28.9	8.8	3.6	chrX	40117668	40117807	(115923088)	+	MIRb	SINE/MIR	2	149	(119)	4421792
25	28.4	2.6	0.0	chrX	40117950	40118027	(115922868)	+	(CT)n	Simple_repeat	1	80	(0)	4421793
2317	11.4	0.0	1.3	chrX	40118250	40118566	(115922329)	C	AluSq2	SINE/Alu	(0)	313	1	4421794
212	35.5	9.3	4.9	chrX	40292272	40292517	(115748378)	C	L2c	LINE/L2	(0)	3387	3130	4422165
41	0.0	2.6	0.0	chrX	40292519	40292557	(115748338)	+	(TC)n	Simple_repeat	1	40	(0)	4422166
941	15.1	4.1	0.5	chrX	40580282	40580467	(115460428)	+	MER53	DNA/hAT	1	193	(0)	4422768
15	12.0	0.0	0.0	chrX	40735345	40735371	(115305524)	+	(CCG)n	Simple_repeat	1	27	(0)	4422996
2247	6.7	0.7	1.8	chrX	40793824	40794107	(115246788)	+	AluSp	SINE/Alu	1	281	(32)	4423107
69	0.0	0.0	0.0	chrX	40794112	40794170	(115246725)	+	(AG)n	Simple_repeat	1	59	(0)	4423108
11808	14.7	0.2	1.3	chrX	40794171	40794362	(115246533)	C	MER52-int	LTR/ERV1	(2050)	5041	4859	4423106
315	23.8	12.5	0.0	chrX	40855510	40855593	(115185302)	C	MER5A1	DNA/hAT-Charlie	(0)	166	71	4423185
590	20.5	1.8	0.0	chrX	40855748	40855859	(115185036)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	4423186
1073	24.4	12.4	6.7	chrX	41125375	41125643	(114915252)	C	L1M5	LINE/L1	(2664)	3482	3175	4423724
49	0.0	0.0	0.0	chrX	41125644	41125685	(114915210)	+	(AC)n	Simple_repeat	1	42	(0)	4423726
1073	24.4	12.4	6.7	chrX	41125686	41125852	(114915043)	C	L1M5	LINE/L1	(2972)	3174	3015	4423724
332	17.1	0.0	0.0	chrX	41326547	41326619	(114714276)	C	MLT2D	LTR/ERVL	(0)	562	483	4424148
1978	14.4	2.8	4.8	chrX	41326668	41326950	(114713945)	C	MLT2D	LTR/ERVL	(48)	366	86	4424148
20	13.7	0.0	0.0	chrX	41333712	41333743	(114707152)	+	(A)n	Simple_repeat	1	32	(0)	4424166
67	21.9	0.0	0.7	chrX	41527177	41527320	(114513575)	+	GA-rich	Low_complexity	1	144	(0)	4424612
65	0.0	0.0	0.0	chrX	42110628	42110682	(113930213)	+	(CT)n	Simple_repeat	1	55	(0)	4425521
30	12.0	0.0	0.0	chrX	42581444	42581488	(113459407)	+	(CT)n	Simple_repeat	1	45	(0)	4426170
92	0.0	2.4	0.0	chrX	43857117	43857201	(112183694)	+	(AG)n	Simple_repeat	1	87	(0)	4427916
2220	10.1	0.4	0.0	chrX	43857203	43857479	(112183416)	C	AluSp	SINE/Alu	(35)	278	1	4427917
45	11.3	0.0	0.0	chrX	43973454	43973520	(112067375)	+	(AG)n	Simple_repeat	1	67	(0)	4428093
44	7.6	0.0	0.0	chrX	44486240	44486295	(111554600)	+	(TC)n	Simple_repeat	1	56	(0)	4428969
2936	20.5	4.3	3.0	chrX	44742830	44743431	(111297464)	+	MLT1E2	LTR/ERVL-MaLR	1	610	(17)	4429602
21	28.3	0.0	1.6	chrX	44906619	44906680	(111134215)	+	(TG)n	Simple_repeat	1	62	(0)	4429990
18	4.7	0.0	0.0	chrX	44906685	44906706	(111134189)	+	(AG)n	Simple_repeat	1	22	(0)	4429991
722	12.4	4.5	0.0	chrX	44906707	44906811	(111134084)	C	AluSz6	SINE/Alu	(195)	117	8	4429992
450	26.1	9.8	1.8	chrX	44991139	44991364	(111049531)	C	L1ME1	LINE/L1	(2828)	3318	3073	4430131
470	33.3	2.8	6.6	chrX	44991393	44991649	(111049246)	C	L1MC5	LINE/L1	(357)	8947	8701	4430145
27806	6.0	3.6	3.3	chrX	45000001	45004021	(111036874)	C	HERVIP10FH-int	LTR/ERV1	(343)	4759	725	4430165
774	17.2	8.0	1.9	chrX	45603373	45603540	(110437355)	+	MSTB1	LTR/ERVL-MaLR	1	222	(210)	4430981
64	7.6	1.2	0.0	chrX	45603541	45603625	(110437270)	+	(CT)n	Simple_repeat	1	86	(0)	4430982
774	20.5	7.1	1.7	chrX	45603626	45603747	(110437148)	+	MSTB1	LTR/ERVL-MaLR	223	353	(79)	4430981
46	2.2	2.1	0.0	chrX	45746835	45746881	(110294014)	+	(CT)n	Simple_repeat	1	48	(0)	4431163
68	3.0	0.0	0.0	chrX	45746883	45746949	(110293946)	+	(TG)n	Simple_repeat	1	67	(0)	4431164
36	4.6	0.0	0.0	chrX	45850154	45850198	(110190697)	+	(GT)n	Simple_repeat	1	45	(0)	4431306
49	6.5	0.0	0.0	chrX	45850198	45850261	(110190634)	+	(GA)n	Simple_repeat	1	64	(0)	4431307
13	18.2	0.0	0.0	chrX	45850395	45850425	(110190470)	+	(CACCAC)n	Simple_repeat	1	31	(0)	4431308
3328	14.8	1.4	7.8	chrX	46422669	46423039	(109617856)	C	MLT2B3	LTR/ERVL	(0)	554	229	4432112
36	2.9	0.0	0.0	chrX	46423040	46423074	(109617821)	+	(AG)n	Simple_repeat	1	35	(0)	4432113
3328	14.8	1.4	7.8	chrX	46423075	46423294	(109617601)	C	MLT2B3	LTR/ERVL	(326)	228	1	4432112
182	28.6	8.3	1.3	chrX	46564480	46564557	(109476338)	+	L2a	LINE/L2	3071	3154	(221)	4432372
17	0.0	0.0	0.0	chrX	46564558	46564576	(109476319)	+	(AC)n	Simple_repeat	1	19	(0)	4432373
48	6.5	1.5	0.0	chrX	46564576	46564640	(109476255)	+	(AG)n	Simple_repeat	1	66	(0)	4432374
2164	9.1	0.4	0.0	chrX	46564664	46564938	(109475957)	C	AluSx1	SINE/Alu	(36)	276	1	4432375
1769	18.9	0.0	0.0	chrX	46565340	46565619	(109475276)	+	AluJb	SINE/Alu	1	280	(32)	4432377
41	0.0	4.8	0.0	chrX	46565620	46565661	(109475234)	+	(AG)n	Simple_repeat	1	44	(0)	4432378
20	4.2	0.0	0.0	chrX	46917762	46917786	(109123109)	+	(TC)n	Simple_repeat	1	25	(0)	4433048
91	0.9	4.1	3.9	chrX	46917800	46917921	(109122974)	+	(TC)n	Simple_repeat	1	127	(0)	4433048
36	2.9	0.0	0.0	chrX	47061716	47061750	(108979145)	+	(TC)n	Simple_repeat	1	35	(0)	4433297
1889	19.8	11.9	5.1	chrX	47086406	47086734	(108954161)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	190	4433356
67	1.6	0.0	0.0	chrX	47086735	47086796	(108954099)	+	(GA)n	Simple_repeat	1	62	(0)	4433357
1889	19.8	11.9	5.1	chrX	47086797	47086973	(108953922)	C	MLT1F	LTR/ERVL-MaLR	(359)	189	1	4433356
70	4.3	0.0	0.0	chrX	47173890	47173962	(108866933)	+	(TC)n	Simple_repeat	1	73	(0)	4433545
19	17.0	4.3	0.0	chrX	47176647	47176693	(108864202)	+	(CTCTCC)n	Simple_repeat	1	49	(0)	4433550
40	4.4	2.1	0.0	chrX	47176698	47176744	(108864151)	+	(TC)n	Simple_repeat	1	48	(0)	4433551
26	21.7	0.0	0.0	chrX	47218894	47218952	(108821943)	+	(CGC)n	Simple_repeat	1	59	(0)	4433620
16	22.5	1.6	6.2	chrX	47219042	47219105	(108821790)	+	(GCC)n	Simple_repeat	1	65	(0)	4433621
41	27.5	0.0	0.0	chrX	48511180	48511286	(107529609)	+	(TCTC)n	Simple_repeat	1	107	(0)	4436224
1488	13.6	3.6	0.0	chrX	48642669	48642882	(107398013)	+	AluJb	SINE/Alu	60	281	(31)	4436530
49	0.0	0.0	0.0	chrX	48834780	48834821	(107206074)	+	(CA)n	Simple_repeat	1	42	(0)	4436922
27	3.2	0.0	0.0	chrX	48834822	48834853	(107206042)	+	(GA)n	Simple_repeat	1	32	(0)	4436923
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
22	21.1	0.0	0.0	chrX	49269819	49269867	(106771028)	+	(GCC)n	Simple_repeat	1	49	(0)	4437810
18	8.3	4.8	4.5	chrX	49270064	49270105	(106770790)	+	(GGC)n	Simple_repeat	1	44	(0)	4437811
18	32.0	1.4	0.0	chrX	49270086	49270158	(106770737)	+	GA-rich	Low_complexity	1	74	(0)	4437812
1942	14.1	0.0	0.0	chrX	49291003	49291272	(106749623)	C	AluJb	SINE/Alu	(28)	284	15	4437859
51	2.1	0.0	0.0	chrX	49291289	49291336	(106749559)	+	(TC)n	Simple_repeat	1	48	(0)	4437860
2180	11.4	0.7	0.0	chrX	49291338	49291627	(106749268)	C	AluSx	SINE/Alu	(20)	292	1	4437861
847	22.9	6.3	0.1	chrX	49612355	49612568	(106428327)	C	L1M5	LINE/L1	(564)	5610	5386	4438096
29	9.3	4.3	0.0	chrX	49612576	49612622	(106428273)	+	(TC)n	Simple_repeat	1	49	(0)	4438097
2005	15.6	1.9	0.7	chrX	49612623	49612930	(106427965)	C	AluSz	SINE/Alu	(0)	312	1	4438098
31	0.0	3.2	9.2	chrX	49762274	49762336	(106278559)	+	(TCTT)n	Simple_repeat	1	65	(0)	4438355
60	15.3	2.7	0.0	chrX	49762337	49762446	(106278449)	+	(CT)n	Simple_repeat	1	113	(0)	4438356
76	1.1	6.7	0.0	chrX	49843295	49843384	(106197511)	+	(TC)n	Simple_repeat	1	96	(0)	4438460
64	1.7	0.0	0.0	chrX	50007380	50007438	(106033457)	+	(TC)n	Simple_repeat	1	59	(0)	4438735
40	0.0	0.0	0.0	chrX	50007441	50007474	(106033421)	+	(CA)n	Simple_repeat	1	34	(0)	4438736
1875	12.1	5.0	0.4	chrX	53010166	53010430	(103030465)	+	AluSx1	SINE/Alu	1	278	(34)	4442871
88	4.5	0.0	0.0	chrX	53010431	53010523	(103030372)	+	(TC)n	Simple_repeat	1	93	(0)	4442872
1975	12.3	0.9	1.5	chrX	53044804	53045195	(102995700)	+	MER41G	LTR/ERV1	1	770	(115)	4442930
789	14.3	4.6	1.6	chrX	53045220	53045345	(102995550)	+	FLAM_C	SINE/Alu	2	131	(12)	4442931
66	30.5	3.3	2.2	chrX	53076207	53076510	(102964385)	+	(CT)n	Simple_repeat	1	314	(0)	4443007
51	2.1	0.0	0.0	chrX	53077999	53078046	(102962849)	+	(TC)n	Simple_repeat	1	48	(0)	4443008
25	18.1	3.1	1.5	chrX	53082571	53082634	(102958261)	+	(CCG)n	Simple_repeat	1	66	(0)	4443013
18	0.0	0.0	0.0	chrX	53473931	53473950	(102566945)	+	(CT)n	Simple_repeat	1	20	(0)	4443852
40	2.6	0.0	0.0	chrX	53474042	53474080	(102566815)	+	(CT)n	Simple_repeat	1	39	(0)	4443853
35	13.4	0.0	1.7	chrX	53474081	53474139	(102566756)	+	(AC)n	Simple_repeat	1	59	(0)	4443854
24	0.0	0.0	0.0	chrX	53538698	53538724	(102502171)	+	(AC)n	Simple_repeat	1	27	(0)	4443978
34	0.0	0.0	0.0	chrX	53538725	53538753	(102502142)	+	(CT)n	Simple_repeat	1	29	(0)	4443979
100	2.0	1.0	0.0	chrX	53908945	53909044	(102131851)	+	(GAGA)n	Simple_repeat	1	101	(0)	4444608
671	14.6	9.1	0.0	chrX	53909054	53909163	(102131732)	+	5S	rRNA	1	121	(0)	4444609
2382	8.5	0.0	1.0	chrX	53909165	53909470	(102131425)	+	AluSg4	SINE/Alu	2	304	(6)	4444610
2364	9.2	0.0	1.0	chrX	54302296	54302600	(101738295)	C	AluSx	SINE/Alu	(10)	302	1	4445433
38	0.0	0.0	0.0	chrX	54302700	54302732	(101738163)	+	(TC)n	Simple_repeat	1	33	(0)	4445434
23	0.0	0.0	0.0	chrX	54302733	54302757	(101738138)	+	(AT)n	Simple_repeat	1	25	(0)	4445435
2128	13.4	0.0	2.9	chrX	54302758	54303071	(101737824)	C	AluJo	SINE/Alu	(7)	305	1	4445436
1134	27.5	6.4	3.2	chrX	54401753	54402131	(101638764)	C	MLT1F2	LTR/ERVL-MaLR	(168)	392	1	4445697
4953	5.4	7.1	0.1	chrX	55143045	55143716	(100897179)	C	LTR30	LTR/ERV1	(0)	722	1	4446819
14688	14.6	4.6	4.7	chrX	55150574	55151884	(100889011)	+	MER4-int	LTR/ERV1	4929	6221	(377)	4446827
11874	12.8	2.8	2.1	chrX	55204867	55207129	(100833766)	C	MER83B-int	LTR/ERV1	(1629)	3251	1191	4446893
46	0.0	0.0	0.0	chrX	55207130	55207168	(100833727)	+	(AG)n	Simple_repeat	1	39	(0)	4446896
3383	14.6	10.0	3.7	chrX	55207169	55207893	(100833002)	C	MER83B-int	LTR/ERV1	(5835)	1702	447	4446893
1740	17.5	5.6	8.8	chrX	63488738	63489144	(92551751)	+	L1M1	LINE/L1	1414	1806	(5759)	4450198
28	5.8	0.0	0.0	chrX	63489145	63489180	(92551715)	+	(AG)n	Simple_repeat	1	36	(0)	4450199
10602	13.6	4.2	2.3	chrX	63489181	63492091	(92548804)	+	L1M1	LINE/L1	1756	4729	(2836)	4450198
2130	12.1	0.0	0.3	chrX	65844311	65844600	(90196295)	+	AluSz6	SINE/Alu	1	289	(23)	4452976
54	2.0	0.0	0.0	chrX	65844601	65844651	(90196244)	+	(AG)n	Simple_repeat	1	51	(0)	4452977
506	28.9	3.5	1.5	chrX	65844660	65844856	(90196039)	C	MIRb	SINE/MIR	(16)	252	52	4452978
1676	18.1	4.1	1.6	chrX	65908702	65909127	(90131768)	C	L1M4	LINE/L1	(5105)	2412	1976	4453061
58	1.9	0.0	0.0	chrX	65909128	65909181	(90131714)	+	(CT)n	Simple_repeat	1	54	(0)	4453063
427	28.4	7.8	10.4	chrX	66919649	66919860	(89121035)	+	MIR3	SINE/MIR	3	208	(0)	4454281
39	6.0	1.9	0.0	chrX	68106073	68106125	(87934770)	+	(GA)n	Simple_repeat	1	54	(0)	4455664
339	29.2	3.2	1.6	chrX	68106144	68106265	(87934630)	+	L1ME4a	LINE/L1	5996	6119	(5)	4455665
34	0.0	2.5	0.0	chrX	68416028	68416067	(87624828)	+	(TA)n	Simple_repeat	1	41	(0)	4456245
51	0.0	0.0	0.0	chrX	68416068	68416111	(87624784)	+	(AG)n	Simple_repeat	1	44	(0)	4456246
1237	16.8	0.5	1.0	chrX	68416113	68416320	(87624575)	C	AluSx1	SINE/Alu	(82)	230	24	4456247
27	0.0	0.0	0.0	chrX	68446220	68446245	(87594650)	+	(AAAT)n	Simple_repeat	1	26	(0)	4456315
29	0.0	0.0	0.0	chrX	68446297	68446321	(87594574)	+	(TC)n	Simple_repeat	1	25	(0)	4456316
2110	12.0	0.0	3.6	chrX	68446322	68446629	(87594266)	C	AluSz	SINE/Alu	(14)	298	2	4456317
18380	14.3	5.9	5.7	chrX	68588261	68589872	(87451023)	+	L1MA2	LINE/L1	12	1752	(5813)	4456621
40	0.0	0.0	0.0	chrX	68589873	68589906	(87450989)	+	(GA)n	Simple_repeat	1	34	(0)	4456622
18380	14.3	5.9	5.7	chrX	68589907	68591376	(87449519)	+	L1MA2	LINE/L1	1753	3201	(4364)	4456621
62	6.4	2.4	0.0	chrX	68809138	68809219	(87231676)	+	(TC)n	Simple_repeat	1	84	(0)	4457017
372	32.9	3.0	11.3	chrX	68809248	68809504	(87231391)	C	MIRb	SINE/MIR	(30)	238	4	4457018
23	0.0	0.0	0.0	chrX	68902046	68902070	(87138825)	+	(TG)n	Simple_repeat	1	25	(0)	4457180
37	0.0	0.0	0.0	chrX	68902071	68902102	(87138793)	+	(GA)n	Simple_repeat	1	32	(0)	4457181
77	23.1	2.7	1.8	chrX	69037225	69037443	(87003452)	+	(CTCT)n	Simple_repeat	1	225	(0)	4457420
17	7.4	3.5	0.0	chrX	69083806	69083834	(86957061)	+	(TTC)n	Simple_repeat	1	30	(0)	4457515
14	22.5	0.0	0.0	chrX	69083835	69083842	(86957053)	+	(TTTTTC)n	Simple_repeat	1	37	(0)	4457516
37	6.1	1.9	1.9	chrX	69083912	69083964	(86956931)	+	(TC)n	Simple_repeat	1	54	(0)	4457517
17	24.4	0.0	3.5	chrX	69084038	69084094	(86956801)	+	(CCCCTC)n	Simple_repeat	1	57	(0)	4457518
38	4.0	5.8	0.0	chrX	69130686	69130737	(86910158)	+	(CT)n	Simple_repeat	1	55	(0)	4457609
48	4.1	0.0	0.0	chrX	69295205	69295254	(86745641)	+	(TC)n	Simple_repeat	1	50	(0)	4457966
2278	14.9	9.1	0.0	chrX	70703888	70704079	(85336816)	+	MSTA	LTR/ERVL-MaLR	1	198	(230)	4460069
52	5.4	0.0	0.0	chrX	70704080	70704137	(85336758)	+	(TC)n	Simple_repeat	1	58	(0)	4460070
2278	14.9	9.1	0.0	chrX	70704138	70704333	(85336562)	+	MSTA	LTR/ERVL-MaLR	199	427	(1)	4460069
10475	18.7	2.7	5.2	chrX	70752638	70755655	(85285240)	+	L1MA2	LINE/L1	17	2966	(4530)	4460145
49	0.0	0.0	0.0	chrX	70788974	70789015	(85251880)	+	(AG)n	Simple_repeat	1	42	(0)	4460182
246	26.0	3.8	6.1	chrX	70789032	70789053	(85251842)	C	SVA_D	Retroposon/SVA	(1174)	212	193	4460183
681	18.8	0.0	8.0	chrX	70789054	70789191	(85251704)	+	FLAM_A	SINE/Alu	1	127	(15)	4460184
2179	8.5	0.0	0.0	chrX	70979718	70979977	(85060918)	+	AluSx	SINE/Alu	1	260	(52)	4460544
85	14.4	4.2	0.0	chrX	70979978	70980143	(85060752)	+	A-rich	Low_complexity	1	173	(0)	4460545
10298	9.2	1.6	2.5	chrX	70998146	70998804	(85042091)	C	L1MA3	LINE/L1	(5139)	2426	1757	4460575
51	1.9	1.9	0.0	chrX	70998805	70998856	(85042039)	+	(TC)n	Simple_repeat	1	53	(0)	4460583
10298	9.2	1.6	2.5	chrX	70998857	70998885	(85042010)	C	L1MA3	LINE/L1	(5809)	1756	1728	4460575
2127	10.8	0.0	8.1	chrX	71084351	71084685	(84956210)	+	AluSz6	SINE/Alu	1	308	(4)	4460788
1576	15.4	1.4	5.1	chrX	71084686	71084976	(84955919)	C	AluJr	SINE/Alu	(31)	281	1	4460789
1048	14.3	7.2	0.0	chrX	71483446	71483613	(84557282)	+	AluJb	SINE/Alu	129	309	(3)	4461680
282	12.5	0.0	0.0	chrX	71483625	71483664	(84557231)	C	Tigger1	DNA/TcMar-Tigger	(1950)	468	429	4461681
21	10.9	4.9	0.0	chrX	71483724	71483740	(84557155)	+	(AT)n	Simple_repeat	1	19	(0)	4461682
48	0.0	0.0	0.0	chrX	71483741	71483781	(84557114)	+	(TC)n	Simple_repeat	1	41	(0)	4461683
21	10.9	4.9	0.0	chrX	71483782	71483804	(84557091)	+	(AT)n	Simple_repeat	2	24	(0)	4461684
5277	8.8	2.3	2.8	chrX	71495857	71496702	(84544193)	C	HERV9N-int	LTR/ERV1	(633)	4741	4024	4461716
27139	4.9	0.7	0.2	chrX	71496686	71500000	(84540895)	C	HERV9-int	LTR/ERV1	(3458)	4978	1770	4461715
31	4.5	6.4	0.0	chrX	71620059	71620105	(84420790)	+	(GA)n	Simple_repeat	1	50	(0)	4461943
11437	15.9	2.5	3.7	chrX	71679162	71679712	(84361183)	C	L1M1	LINE/L1	(5234)	2331	1766	4462043
72	6.7	1.0	1.0	chrX	71679713	71679808	(84361087)	+	(TC)n	Simple_repeat	1	97	(0)	4462051
11437	15.9	2.5	3.7	chrX	71679809	71681319	(84359576)	C	L1M1	LINE/L1	(5800)	1765	296	4462043
1505	15.2	0.0	2.5	chrX	72164515	72164673	(83876222)	+	AluJb	SINE/Alu	134	292	(20)	4462809
29	12.6	0.0	0.0	chrX	72164674	72164717	(83876178)	+	(GA)n	Simple_repeat	1	44	(0)	4462812
677	21.6	7.3	4.2	chrX	72164718	72164930	(83875965)	+	L1ME3B	LINE/L1	5993	6212	(30)	4462801
1702	11.3	1.7	1.3	chrX	72630038	72630276	(83410619)	+	AluSx3	SINE/Alu	71	310	(1)	4463652
30	0.0	0.0	0.0	chrX	72630297	72630322	(83410573)	+	(GA)n	Simple_repeat	1	26	(0)	4463653
3180	20.5	8.8	6.3	chrX	72630331	72631309	(83409586)	C	L1MDa	LINE/L1	(4499)	2134	1130	4463648
7031	20.2	10.3	8.0	chrX	72722344	72722710	(83318185)	C	L1MC5	LINE/L1	(21)	9283	8944	4463795
54	2.0	0.0	0.0	chrX	72722711	72722761	(83318134)	+	(GA)n	Simple_repeat	1	51	(0)	4463796
7031	20.2	10.3	8.0	chrX	72722762	72724046	(83316849)	C	L1MC5	LINE/L1	(361)	8943	7529	4463795
1999	11.9	2.0	1.4	chrX	73819647	73819940	(82220955)	+	AluSz	SINE/Alu	1	296	(16)	4464782
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
560	10.0	0.0	0.0	chrX	74179498	74179577	(81861318)	+	HERVK3-int	LTR/ERVK	3474	3553	(3284)	4465236
928	13.0	0.0	0.0	chrX	74179574	74179754	(81861141)	+	HERVK3-int	LTR/ERVK	2027	2177	(3085)	4465236
2934	9.4	1.4	0.5	chrX	74179751	74180188	(81860707)	+	HERVK3-int	LTR/ERVK	2414	2855	(4347)	4465236
794	9.6	10.6	0.7	chrX	74254190	74254325	(81786570)	+	HUERS-P3b-int	LTR/ERV1	409	559	(6859)	4465335
13191	10.0	16.3	12.4	chrX	74254334	74256146	(81784749)	+	HUERS-P3b-int	LTR/ERV1	747	2912	(4506)	4465335
19	13.2	0.0	2.9	chrX	74293414	74293448	(81747447)	+	GA-rich	Low_complexity	1	35	(0)	4465402
2504	13.5	8.4	0.5	chrX	74343597	74343990	(81696905)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4465490
1852	18.8	7.9	7.6	chrX	74343991	74344242	(81696653)	+	LTR55	LTR/ERVL?	286	531	(17)	4465489
486	25.9	0.0	6.2	chrX	74438997	74439140	(81601755)	C	UCON105	Unknown	(5)	268	134	4465640
71	13.8	2.8	0.7	chrX	74439159	74439267	(81601628)	+	(TCTT)n	Simple_repeat	1	111	(0)	4465641
2269	10.8	1.9	0.7	chrX	74744885	74744897	(81295998)	C	AluSx1	SINE/Alu	(2)	310	298	4466066
77	3.3	4.3	0.0	chrX	74744898	74744990	(81295905)	+	(TC)n	Simple_repeat	1	97	(0)	4466067
2269	10.8	1.9	0.7	chrX	74744991	74745282	(81295613)	C	AluSx1	SINE/Alu	(15)	297	1	4466066
61	2.8	2.6	2.5	chrX	74889953	74890029	(81150866)	+	(TC)n	Simple_repeat	1	79	(0)	4466226
10823	17.5	3.2	0.8	chrX	76305267	76306068	(79734827)	C	L1PA4	LINE/L1	(5193)	2372	1744	4467398
48	4.1	0.0	0.0	chrX	76306069	76306118	(79734777)	+	(TC)n	Simple_repeat	1	50	(0)	4467400
10823	23.1	3.6	0.3	chrX	76306119	76307808	(79733087)	C	L1PA4	LINE/L1	(5822)	1743	24	4467398
45	2.4	0.0	0.0	chrX	78415076	78415118	(77625777)	+	(TC)n	Simple_repeat	1	43	(0)	4469798
1923	10.9	10.8	1.2	chrX	78681213	78681397	(77359498)	+	THE1D	LTR/ERVL-MaLR	1	190	(191)	4470056
44	4.4	0.0	0.0	chrX	78681398	78681444	(77359451)	+	(TC)n	Simple_repeat	1	47	(0)	4470057
1923	10.9	10.8	1.2	chrX	78681445	78681602	(77359293)	+	THE1D	LTR/ERVL-MaLR	191	380	(1)	4470056
48180	5.4	1.0	0.9	chrX	79956443	79962455	(76078440)	+	HERV17-int	LTR/ERV1	1	6019	(2607)	4471308
38	2.8	0.0	0.0	chrX	80109017	80109053	(75931842)	+	(AG)n	Simple_repeat	1	37	(0)	4471446
1479	19.4	3.2	1.5	chrX	80109054	80109326	(75931569)	C	AluJb	SINE/Alu	(34)	278	1	4471447
1253	19.9	10.0	0.7	chrX	80460389	80460686	(75580209)	+	MLT2B1	LTR/ERVL	1	329	(191)	4471851
62	0.0	0.0	0.0	chrX	80460690	80460742	(75580153)	+	(TC)n	Simple_repeat	1	53	(0)	4471852
40	7.6	0.0	1.8	chrX	80460743	80460799	(75580096)	+	(AT)n	Simple_repeat	1	57	(0)	4471853
107	11.7	3.7	0.5	chrX	80809684	80809870	(75231025)	+	GA-rich	Low_complexity	1	194	(0)	4472223
19883	18.1	1.8	1.1	chrX	81140585	81141462	(74899433)	+	L1M1	LINE/L1	884	1755	(5810)	4472558
50	2.2	0.0	0.0	chrX	81141463	81141509	(74899386)	+	(AG)n	Simple_repeat	1	47	(0)	4472560
19883	18.1	1.8	1.1	chrX	81141510	81143365	(74897530)	+	L1M1	LINE/L1	1756	3635	(3930)	4472558
30	12.1	0.0	0.0	chrX	83512441	83512485	(72528410)	+	(TC)n	Simple_repeat	1	45	(0)	4474966
12907	20.4	5.4	1.0	chrX	83737990	83738890	(72302005)	+	L1M1	LINE/L1	686	1746	(5819)	4475227
61	3.4	0.0	0.0	chrX	83738891	83738951	(72301944)	+	(GA)n	Simple_repeat	1	61	(0)	4475230
19815	13.7	3.0	0.9	chrX	83738952	83744009	(72296886)	+	L1M1	LINE/L1	1747	6892	(831)	4475227
20	0.0	0.0	0.0	chrX	86948065	86948086	(69092809)	+	(A)n	Simple_repeat	1	22	(0)	4478624
53	2.0	0.0	1.9	chrX	86948111	86948164	(69092731)	+	(AG)n	Simple_repeat	1	54	(0)	4478625
2245	20.0	1.5	17.1	chrX	87209142	87209786	(68831109)	C	MER54A	LTR/ERVL	(171)	730	188	4478897
973	23.3	1.0	0.0	chrX	87716615	87716820	(68324075)	C	MER92B	LTR/ERV1	(428)	208	1	4479458
44	2.0	0.0	0.0	chrX	87716930	87716980	(68323915)	+	(CT)n	Simple_repeat	1	51	(0)	4479459
86	9.8	0.0	0.0	chrX	87716981	87717103	(68323792)	+	(TA)n	Simple_repeat	1	123	(0)	4479460
10880	22.0	4.4	6.1	chrX	88839257	88842309	(67198586)	+	L1M1	LINE/L1	5	3002	(4563)	4480717
1893	11.9	9.4	1.7	chrX	90129241	90129421	(65911474)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	4482160
46	0.0	0.0	0.0	chrX	90129422	90129460	(65911435)	+	(CT)n	Simple_repeat	1	39	(0)	4482161
1893	11.9	9.4	1.7	chrX	90129461	90129629	(65911266)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	4482160
50	4.0	0.0	0.0	chrX	91328331	91328382	(64712513)	+	(GA)n	Simple_repeat	1	52	(0)	4483397
245	35.2	10.2	2.9	chrX	91328480	91328751	(64712144)	C	L2	LINE/L2	(1156)	2263	1970	4483398
52	3.7	8.1	1.1	chrX	91434489	91434575	(64606320)	+	(TC)n	Simple_repeat	1	94	(0)	4483497
1773	7.2	0.4	9.1	chrX	94154244	94154506	(61886389)	C	AluY	SINE/Alu	(71)	240	1	4486588
14	19.4	4.0	1.9	chrX	94154507	94154519	(61886376)	+	(TTTA)n	Simple_repeat	2	14	(0)	4486589
45	2.4	0.0	0.0	chrX	94154564	94154606	(61886289)	+	(TC)n	Simple_repeat	1	43	(0)	4486590
665	28.8	15.2	3.1	chrX	94154618	94154970	(61885925)	C	MLT1L	LTR/ERVL-MaLR	(165)	445	49	4486591
417	35.0	3.0	0.6	chrX	95886490	95886653	(60154242)	+	MLT1G1	LTR/ERVL-MaLR	20	187	(382)	4488452
56	6.5	0.0	0.0	chrX	95886654	95886719	(60154176)	+	(CT)n	Simple_repeat	1	66	(0)	4488453
46	8.2	1.5	0.0	chrX	96580270	96580334	(59460561)	+	(GA)n	Simple_repeat	1	66	(0)	4489366
241	24.1	15.5	7.9	chrX	96580356	96580373	(59460522)	+	L1ME1	LINE/L1	5951	5965	(213)	4489367
2441	8.9	0.0	0.3	chrX	96580374	96580677	(59460218)	+	AluSp	SINE/Alu	1	303	(10)	4489368
41	4.8	0.0	0.0	chrX	97239835	97239878	(58801017)	+	(TC)n	Simple_repeat	1	44	(0)	4490325
16	9.6	0.0	0.0	chrX	97239879	97239901	(58800994)	+	(AC)n	Simple_repeat	1	23	(0)	4490326
55	3.7	0.0	0.0	chrX	99892903	99892958	(56147937)	+	(AG)n	Simple_repeat	1	56	(0)	4493602
4559	17.7	1.5	0.9	chrX	99892959	99893797	(56147098)	+	L1MA10	LINE/L1	5495	6332	(2)	4493600
38	8.1	0.0	0.0	chrX	100226576	100226627	(55814268)	+	(AG)n	Simple_repeat	1	52	(0)	4494024
400	7.7	0.0	0.0	chrX	101407340	101407391	(54633504)	+	MER66B	LTR/ERV1	295	346	(140)	4495989
40	14.8	2.6	0.0	chrX	101407409	101407485	(54633410)	+	GA-rich	Low_complexity	1	79	(0)	4495990
56	1.9	0.0	0.0	chrX	101948949	101949000	(54091895)	+	(TC)n	Simple_repeat	1	52	(0)	4496686
53	6.8	0.0	0.0	chrX	102084381	102084443	(53956452)	+	(CT)n	Simple_repeat	1	63	(0)	4496822
30	3.5	0.0	0.0	chrX	102084447	102084476	(53956419)	+	(CA)n	Simple_repeat	1	30	(0)	4496823
1997	18.5	2.0	1.8	chrX	103050723	103051167	(52989728)	C	L1MCa	LINE/L1	(6005)	503	58	4497975
553	9.5	0.0	0.0	chrX	103051168	103051251	(52989644)	C	HERVFH21-int	LTR/ERV1	(6445)	84	1	4497976
2607	8.6	10.2	6.3	chrX	103051252	103051712	(52989183)	C	LTR21A	LTR/ERV1	(0)	481	1	4497976
2134	10.3	0.7	0.0	chrX	103059700	103059971	(52980924)	+	AluSq2	SINE/Alu	5	278	(35)	4497995
53	0.0	0.0	0.0	chrX	103059973	103060017	(52980878)	+	(TC)n	Simple_repeat	1	45	(0)	4497996
46	5.9	0.0	0.0	chrX	103509290	103509342	(52531553)	+	(TC)n	Simple_repeat	1	53	(0)	4498722
67	22.0	2.0	3.9	chrX	103509344	103509543	(52531352)	+	(CTCTC)n	Simple_repeat	1	204	(0)	4498723
41	14.9	0.0	1.3	chrX	103708174	103708249	(52332646)	+	GA-rich	Low_complexity	1	76	(0)	4499033
430	18.8	2.4	0.0	chrX	103708280	103708359	(52332536)	+	Tigger15a	DNA/TcMar-Tigger	143	224	(491)	4499034
30	19.0	2.9	1.4	chrX	103802151	103802219	(52238676)	+	GA-rich	Low_complexity	1	71	(0)	4499180
279	34.5	0.0	2.9	chrX	103802222	103802394	(52238501)	+	L1ME5	LINE/L1	6027	6194	(0)	4499181
322	33.9	4.5	2.6	chrX	104786640	104786854	(51254041)	C	L2a	LINE/L2	(5)	3421	3154	4500683
75	0.0	0.0	0.0	chrX	104786920	104786983	(51253912)	+	(TC)n	Simple_repeat	1	64	(0)	4500684
797	26.4	12.1	1.1	chrX	104787062	104787325	(51253570)	C	L2a	LINE/L2	(1)	3425	3129	4500685
90	14.0	2.2	2.7	chrX	105489641	105489821	(50551074)	+	(TTTC)n	Simple_repeat	1	185	(0)	4501605
2213	13.7	0.0	0.0	chrX	105489822	105490127	(50550768)	C	AluSx	SINE/Alu	(6)	306	1	4501606
33	19.7	0.0	0.0	chrX	105566199	105566262	(50474633)	+	GA-rich	Low_complexity	1	64	(0)	4501739
243	35.8	1.9	0.7	chrX	105566277	105566428	(50474467)	C	L2a	LINE/L2	(745)	2674	2521	4501734
49	4.0	0.0	0.0	chrX	105941542	105941592	(50099303)	+	(AG)n	Simple_repeat	1	51	(0)	4502218
4249	19.7	9.1	5.2	chrX	105941746	105942624	(50098271)	C	L1MB8	LINE/L1	(6)	6172	5254	4502219
35	15.5	1.0	1.0	chrX	106437384	106437490	(49603405)	+	(CT)n	Simple_repeat	1	107	(0)	4502727
586	21.2	6.4	3.3	chrX	107016224	107016374	(49024521)	+	L1MC5a	LINE/L1	2605	2760	(17)	4503512
69	0.0	0.0	0.0	chrX	107016375	107016433	(49024462)	+	(AG)n	Simple_repeat	1	59	(0)	4503513
233	27.7	9.6	0.8	chrX	107419811	107419899	(48620996)	C	L3b	LINE/CR1	(2)	4097	4033	4504133
47	6.5	3.1	0.0	chrX	107419909	107419973	(48620922)	+	(TC)n	Simple_repeat	1	67	(0)	4504134
623	28.1	10.3	1.4	chrX	107444309	107444528	(48596367)	+	Charlie16a	DNA/hAT-Charlie	1	242	(100)	4504174
55	0.0	0.0	0.0	chrX	107444578	107444624	(48596271)	+	(TC)n	Simple_repeat	1	47	(0)	4504175
20	0.0	0.0	0.0	chrX	107444625	107444646	(48596249)	+	(GT)n	Simple_repeat	1	22	(0)	4504176
41	6.3	6.0	0.0	chrX	107531314	107531380	(48509515)	+	(CT)n	Simple_repeat	1	71	(0)	4504329
823	15.6	1.5	0.0	chrX	107568778	107568905	(48471990)	+	BC200	scRNA	2	131	(69)	4504401
50	2.2	0.0	0.0	chrX	107568906	107568952	(48471943)	+	(AG)n	Simple_repeat	1	47	(0)	4504402
2306	10.4	0.0	0.0	chrX	107569019	107569317	(48471578)	+	AluSx	SINE/Alu	7	305	(7)	4504403
64	1.7	0.0	0.0	chrX	107742261	107742319	(48298576)	+	(GA)n	Simple_repeat	1	59	(0)	4504742
28	19.5	1.6	0.0	chrX	107742346	107742406	(48298489)	+	G-rich	Low_complexity	1	62	(0)	4504743
211	36.8	7.1	5.5	chrX	108010475	108010710	(48030185)	+	L2	LINE/L2	1341	1580	(1839)	4505173
57	0.0	0.0	1.9	chrX	108010799	108010851	(48030044)	+	(TC)n	Simple_repeat	1	53	(0)	4505174
26	9.1	0.0	0.0	chrX	108010852	108010887	(48030008)	+	(AC)n	Simple_repeat	1	36	(0)	4505175
1349	12.0	0.0	0.0	chrX	108010938	108011121	(48029774)	+	AluSx	SINE/Alu	126	309	(3)	4505176
2172	27.6	9.8	1.1	chrX	108401856	108403103	(47637792)	C	L1MEd	LINE/L1	(2238)	3908	2480	4505753
1210	27.5	8.1	0.8	chrX	108403091	108403233	(47637662)	C	L1MEd	LINE/L1	(5643)	1460	1308	4505753
57	0.0	0.0	0.0	chrX	108403234	108403282	(47637613)	+	(CT)n	Simple_repeat	1	49	(0)	4505755
1210	27.5	8.1	0.8	chrX	108403283	108403644	(47637251)	C	L1MEd	LINE/L1	(5796)	1307	915	4505753
29649	10.6	2.0	3.0	chrX	109238620	109241559	(46799336)	C	HERVIP10FH-int	LTR/ERV1	(1912)	3190	490	4506613
62	0.0	0.0	0.0	chrX	109727658	109727710	(46313185)	+	(TG)n	Simple_repeat	1	53	(0)	4507246
883	20.1	8.1	0.0	chrX	109727742	109727945	(46312950)	C	MER58A	DNA/hAT-Charlie	(2)	222	1	4507247
54	8.3	0.0	1.3	chrX	110105658	110105731	(45935164)	+	(AC)n	Simple_repeat	1	74	(0)	4507924
65	0.0	1.6	1.6	chrX	110105732	110105794	(45935101)	+	(AG)n	Simple_repeat	1	64	(0)	4507925
702	33.5	2.8	1.6	chrX	110105825	110106070	(45934825)	+	MIRb	SINE/MIR	10	258	(10)	4507926
24	3.1	2.9	2.8	chrX	112082764	112082798	(43958097)	+	(TG)n	Simple_repeat	1	36	(0)	4510907
67	1.6	0.0	0.0	chrX	112082799	112082860	(43958035)	+	(GA)n	Simple_repeat	1	62	(0)	4510908
564	27.2	6.5	0.0	chrX	112313406	112313563	(43727332)	C	MIRb	SINE/MIR	(62)	206	38	4511270
45	6.0	0.0	0.0	chrX	112313608	112313659	(43727236)	+	(CT)n	Simple_repeat	1	52	(0)	4511271
43	0.0	0.0	0.0	chrX	114336684	114336720	(41704175)	+	(AG)n	Simple_repeat	1	37	(0)	4513935
1766	18.1	0.0	0.0	chrX	115197472	115197736	(40843159)	+	AluJo	SINE/Alu	3	267	(45)	4515078
39	6.7	0.0	0.0	chrX	115197742	115197788	(40843107)	+	(TC)n	Simple_repeat	1	47	(0)	4515079
279	15.0	0.0	0.0	chrX	115197789	115197828	(40843067)	+	AluSz6	SINE/Alu	243	282	(30)	4515080
4936	28.4	4.6	8.9	chrX	115197829	115197847	(40843048)	+	L1M2	LINE/L1	1915	1915	(4934)	4515077
42	0.0	0.0	0.0	chrX	115197848	115197883	(40843012)	+	(CA)n	Simple_repeat	1	36	(0)	4515081
35	0.0	0.0	0.0	chrX	115491709	115491738	(40549157)	+	(TC)n	Simple_repeat	1	30	(0)	4515611
20	18.6	0.0	2.2	chrX	115491742	115491787	(40549108)	+	(TCCC)n	Simple_repeat	1	46	(0)	4515612
2005	9.6	4.8	2.3	chrX	115554574	115554875	(40486020)	+	AluSz	SINE/Alu	1	310	(2)	4515739
44	19.5	2.8	6.0	chrX	115554976	115555040	(40485855)	+	(TTCC)n	Simple_repeat	1	59	(0)	4515740
1432	8.2	0.0	0.0	chrX	115555041	115555236	(40485659)	C	L1PA5	LINE/L1	(0)	6154	5959	4515741
44	4.5	0.0	0.0	chrX	115594623	115594669	(40446226)	+	(CT)n	Simple_repeat	1	47	(0)	4515805
26	3.0	2.9	0.0	chrX	115594670	115594703	(40446192)	+	(AC)n	Simple_repeat	1	35	(0)	4515806
50	0.0	0.0	0.0	chrX	115615488	115615530	(40425365)	+	(AG)n	Simple_repeat	1	43	(0)	4515849
364	7.7	0.6	1.0	chrX	115705630	115706130	(40334765)	+	(TTTC)n	Simple_repeat	1	504	(0)	4516020
54	11.0	0.0	2.2	chrX	115726604	115726695	(40314200)	+	(TCTCTC)n	Simple_repeat	1	92	(0)	4516063
391	20.8	6.3	10.2	chrX	116733666	116733720	(39307175)	C	MLT2B4	LTR/ERVL	(39)	678	636	4516976
52	0.0	2.1	0.0	chrX	116733721	116733768	(39307127)	+	(AG)n	Simple_repeat	1	49	(0)	4516977
1437	20.9	4.2	11.0	chrX	116733769	116734155	(39306740)	C	MLT2B4	LTR/ERVL	(59)	670	163	4516976
13639	15.6	3.7	1.7	chrX	117358157	117358578	(38682317)	C	L1MA1	LINE/L1	(5336)	2229	1770	4517636
53	0.0	0.0	0.0	chrX	117358579	117358623	(38682272)	+	(TC)n	Simple_repeat	1	45	(0)	4517638
13639	15.6	3.7	1.7	chrX	117358624	117359241	(38681654)	C	L1MA1	LINE/L1	(5796)	1769	1162	4517636
20	0.0	0.0	0.0	chrX	117903136	117903157	(38137738)	+	(AC)n	Simple_repeat	1	22	(0)	4518288
47	2.1	2.1	0.0	chrX	117903158	117903205	(38137690)	+	(AG)n	Simple_repeat	1	49	(0)	4518289
56	0.0	0.0	0.0	chrX	117991847	117991894	(38049001)	+	(CT)n	Simple_repeat	1	48	(0)	4518383
188	26.4	14.9	12.5	chrX	117991908	117992115	(38048780)	+	MamTip2	DNA/hAT-Tip100	91	304	(1)	4518384
30	0.0	0.0	0.0	chrX	118053766	118053798	(37987097)	+	(TG)n	Simple_repeat	1	33	(0)	4518475
102	0.0	3.1	0.0	chrX	118053799	118053895	(37987000)	+	(GA)n	Simple_repeat	1	100	(0)	4518476
737	14.6	0.0	0.0	chrX	118164771	118164866	(37876029)	+	AluJr	SINE/Alu	27	122	(190)	4518674
31	0.0	0.0	0.0	chrX	118164867	118164893	(37876002)	+	(AG)n	Simple_repeat	1	27	(0)	4518675
59	0.0	0.0	0.0	chrX	118167268	118167317	(37873578)	+	(TC)n	Simple_repeat	1	50	(0)	4518681
17	23.5	8.1	1.1	chrX	118495733	118495818	(37545077)	+	(AGCG)n	Simple_repeat	1	93	(0)	4519349
17	10.6	2.1	8.2	chrX	118495918	118495965	(37544930)	+	(CCGC)n	Simple_repeat	1	49	(0)	4519350
29	0.0	0.0	0.0	chrX	118721696	118721720	(37319175)	+	(CT)n	Simple_repeat	1	25	(0)	4519771
184	30.2	7.8	6.2	chrX	118721871	118721983	(37318912)	+	L2a	LINE/L2	3265	3379	(47)	4519772
80	5.3	2.0	0.0	chrX	119000776	119000873	(37040022)	+	(TC)n	Simple_repeat	1	100	(0)	4520291
13	16.2	0.0	0.0	chrX	119236159	119236186	(36804709)	+	G-rich	Low_complexity	1	28	(0)	4520704
28	14.4	0.0	0.0	chrX	119252334	119252379	(36788516)	+	(AG)n	Simple_repeat	1	46	(0)	4520717
462	33.0	5.8	1.2	chrX	119456988	119457212	(36583683)	+	L1MC4	LINE/L1	992	1228	(4987)	4521087
2118	25.2	6.9	9.3	chrX	119457231	119457778	(36583117)	C	L2a	LINE/L2	(283)	3143	2555	4521089
499	19.8	2.0	0.0	chrX	119498932	119499027	(36541868)	+	L1MC4	LINE/L1	7801	7898	(144)	4521178
33	27.8	4.2	1.6	chrX	119499039	119499156	(36541739)	+	(TA)n	Simple_repeat	1	123	(0)	4521179
20	10.8	0.0	0.0	chrX	119499158	119499187	(36541708)	+	(GA)n	Simple_repeat	1	30	(0)	4521180
352	23.5	1.6	8.5	chrX	119499193	119499299	(36541596)	+	L1MC4	LINE/L1	7922	8024	(18)	4521178
1455	17.6	10.5	0.0	chrX	119499300	119499572	(36541323)	C	AluSx	SINE/Alu	(7)	305	1	4521181
194	34.3	8.0	7.0	chrX	119666366	119666402	(36374493)	C	MamRTE1	LINE/RTE-BovB	(3528)	229	98	4521534
30	13.3	6.1	0.0	chrX	119666506	119666571	(36374324)	+	GA-rich	Low_complexity	1	70	(0)	4521536
22	3.0	0.0	7.5	chrX	119999775	119999814	(36041081)	+	(GGAG)n	Simple_repeat	1	40	(0)	4522299
65	0.0	0.0	0.0	chrX	119999815	119999869	(36041026)	+	(GA)n	Simple_repeat	1	55	(0)	4522300
18	0.0	0.0	0.0	chrX	120015556	120015575	(36025320)	+	(TG)n	Simple_repeat	1	20	(0)	4522331
67	6.8	2.1	0.0	chrX	120015575	120015667	(36025228)	+	(GA)n	Simple_repeat	1	95	(0)	4522332
43	14.5	0.0	0.0	chrX	120309670	120309745	(35731150)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	4522742
16	12.1	3.6	0.0	chrX	120309745	120309772	(35731123)	+	(TG)n	Simple_repeat	1	29	(0)	4522743
358	35.6	2.2	0.6	chrX	120354805	120354985	(35685910)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	4522804
54	0.0	0.0	2.0	chrX	120354986	120355036	(35685859)	+	(CT)n	Simple_repeat	1	51	(0)	4522805
1922	15.1	14.6	1.1	chrX	120745024	120745204	(35295691)	+	MSTA	LTR/ERVL-MaLR	3	222	(206)	4523514
38	5.0	0.0	0.0	chrX	120745205	120745246	(35295649)	+	(TC)n	Simple_repeat	1	42	(0)	4523515
1922	15.1	14.6	1.1	chrX	120745247	120745432	(35295463)	+	MSTA	LTR/ERVL-MaLR	223	427	(1)	4523514
1308	20.9	5.5	2.1	chrX	122302519	122302776	(33738119)	+	AluJr	SINE/Alu	5	264	(48)	4525333
41	0.0	0.0	0.0	chrX	122302777	122302811	(33738084)	+	(AG)n	Simple_repeat	1	35	(0)	4525334
1308	20.9	5.5	2.1	chrX	122302812	122302834	(33738061)	+	AluJr	SINE/Alu	274	296	(16)	4525333
13078	18.3	5.5	1.5	chrX	122302835	122305527	(33735368)	C	L1MC1	LINE/L1	(1064)	5257	2425	4525331
31	35.2	2.4	2.8	chrX	123184217	123184422	(32856473)	+	G-rich	Low_complexity	1	211	(0)	4526384
31	16.8	0.0	0.0	chrX	123780531	123780584	(32260311)	+	(TC)n	Simple_repeat	1	54	(0)	4527317
24	0.0	0.0	0.0	chrX	123780584	123780609	(32260286)	+	(CA)n	Simple_repeat	1	26	(0)	4527318
36	0.0	0.0	0.0	chrX	123780610	123780640	(32260255)	+	(CT)n	Simple_repeat	1	31	(0)	4527319
1653	21.7	4.1	1.3	chrX	123834369	123834746	(32206149)	C	CR1_Mam	LINE/CR1	(1526)	678	290	4527464
133	18.6	2.4	3.3	chrX	124219816	124220144	(31820751)	+	(CTTT)n	Simple_repeat	1	337	(0)	4528287
407	37.7	6.2	1.3	chrX	124220150	124220185	(31820710)	C	L1ME1	LINE/L1	(292)	5902	5863	4528288
1749	15.9	2.2	2.2	chrX	124220186	124220462	(31820433)	C	AluJo	SINE/Alu	(3)	309	33	4528289
4256	27.6	4.0	3.3	chrX	124977848	124977967	(31062928)	C	L1M4a1	LINE/L1	(1096)	1483	1376	4529454
66	0.0	0.0	0.0	chrX	124977968	124978023	(31062872)	+	(GA)n	Simple_repeat	1	56	(0)	4529455
4256	27.6	4.0	3.3	chrX	124978024	124979374	(31061521)	C	L1M4a1	LINE/L1	(1204)	1375	1	4529454
8496	20.0	12.1	0.5	chrX	125349678	125351217	(30689678)	+	L1M1	LINE/L1	19	1765	(5800)	4530014
106	2.0	0.0	0.0	chrX	125351218	125351316	(30689579)	+	(AG)n	Simple_repeat	1	99	(0)	4530015
8496	20.5	8.2	0.4	chrX	125351317	125351723	(30689172)	+	L1M1	LINE/L1	1766	2188	(5377)	4530014
994	15.5	18.0	1.4	chrX	127561249	127561434	(28479461)	C	MSTA	LTR/ERVL-MaLR	(0)	428	198	4532375
43	0.0	0.0	0.0	chrX	127561435	127561471	(28479424)	+	(GA)n	Simple_repeat	1	37	(0)	4532376
994	15.9	17.6	6.9	chrX	127561472	127561562	(28479333)	C	MSTA	LTR/ERVL-MaLR	(178)	197	75	4532375
6795	10.1	1.5	0.4	chrX	127561569	127563215	(28477680)	C	L1PA10	LINE/L1	(145)	6023	4364	4532377
5900	26.3	5.5	3.6	chrX	128352647	128354343	(27686552)	+	MSTD-int	LTR/ERVL-MaLR	2	1733	(2)	4533213
506	27.4	2.7	1.8	chrX	128354359	128354523	(27686372)	+	MSTD	LTR/ERVL-MaLR	9	197	(260)	4533213
57	0.0	0.0	0.0	chrX	128354524	128354572	(27686323)	+	(TC)n	Simple_repeat	1	49	(0)	4533214
611	29.0	4.4	2.7	chrX	128354573	128354826	(27686069)	+	MSTD	LTR/ERVL-MaLR	198	456	(1)	4533213
55	3.7	0.0	0.0	chrX	128931431	128931486	(27109409)	+	(TC)n	Simple_repeat	1	56	(0)	4533974
24	0.0	0.0	0.0	chrX	128931487	128931513	(27109382)	+	(AC)n	Simple_repeat	1	27	(0)	4533975
13	14.5	7.9	0.0	chrX	129655028	129655065	(26385830)	+	G-rich	Low_complexity	1	41	(0)	4535044
13	26.5	2.2	0.0	chrX	129952734	129952778	(26088117)	+	(TGTC)n	Simple_repeat	1	46	(0)	4535648
14	20.7	2.6	0.0	chrX	129952760	129952798	(26088097)	+	(CTCG)n	Simple_repeat	1	40	(0)	4535649
66	0.0	0.0	0.0	chrX	129952799	129952854	(26088041)	+	(CT)n	Simple_repeat	1	56	(0)	4535650
2012	11.6	0.0	1.1	chrX	129963530	129963805	(26077090)	+	AluSz	SINE/Alu	1	273	(39)	4535671
38	32.7	2.9	2.8	chrX	129963806	129963840	(26077055)	+	A-rich	Low_complexity	53	113	(95)	4535672
73	11.4	7.6	0.0	chrX	129963815	129963840	(26077055)	+	GA-rich	Low_complexity	1	51	(105)	4535673
35	12.1	1.4	2.9	chrX	129963841	129963909	(26076986)	+	G-rich	Low_complexity	1	70	(0)	4535674
38	32.7	2.9	2.8	chrX	129963910	129963961	(26076934)	+	A-rich	Low_complexity	114	208	(0)	4535672
73	11.4	7.6	0.0	chrX	129963910	129963959	(26076936)	+	GA-rich	Low_complexity	52	156	(0)	4535673
319	31.1	5.4	0.0	chrX	129963989	129964094	(26076801)	+	MamRTE1	LINE/RTE-BovB	3696	3807	(5)	4535675
30	18.3	1.6	1.5	chrX	129972847	129972910	(26067985)	+	(AC)n	Simple_repeat	1	65	(0)	4535703
46	0.0	0.0	0.0	chrX	129972911	129972949	(26067946)	+	(AG)n	Simple_repeat	1	39	(0)	4535704
17	4.9	0.0	0.0	chrX	129982601	129982621	(26058274)	+	(CA)n	Simple_repeat	1	21	(0)	4535725
2204	10.7	1.4	0.0	chrX	130115331	130115621	(25925274)	+	AluSx1	SINE/Alu	1	295	(17)	4535986
49	11.6	2.2	2.1	chrX	130115622	130115736	(25925159)	+	A-rich	Low_complexity	1	115	(0)	4535987
375	25.5	4.5	1.9	chrX	130290452	130290559	(25750336)	+	MLT1L	LTR/ERVL-MaLR	166	276	(334)	4536291
41	13.1	1.5	0.0	chrX	130290567	130290633	(25750262)	+	(GA)n	Simple_repeat	1	68	(0)	4536292
483	26.0	5.6	1.2	chrX	130290707	130290877	(25750018)	+	MLT1L	LTR/ERVL-MaLR	360	538	(72)	4536291
13	9.1	0.0	3.9	chrX	130703487	130703512	(25337383)	+	(TTCC)n	Simple_repeat	1	26	(0)	4536965
29	0.0	0.0	0.0	chrX	130703513	130703537	(25337358)	+	(TC)n	Simple_repeat	1	25	(0)	4536966
34	14.7	0.0	0.0	chrX	130884724	130884783	(25156112)	+	(GAGA)n	Simple_repeat	1	60	(0)	4537225
297	21.9	5.2	1.4	chrX	131178497	131178570	(24862325)	+	L2b	LINE/L2	3299	3375	(0)	4537679
49	0.0	0.0	0.0	chrX	131178597	131178638	(24862257)	+	(GA)n	Simple_repeat	1	42	(0)	4537680
204	26.9	1.9	0.0	chrX	131178670	131178721	(24862174)	C	L2c	LINE/L2	(8)	3379	3327	4537681
826	7.5	0.0	0.0	chrX	131336538	131336631	(24704264)	+	AluSp	SINE/Alu	1	94	(219)	4537917
57	1.9	0.0	0.0	chrX	131336635	131336687	(24704208)	+	(AG)n	Simple_repeat	1	53	(0)	4537918
47	0.0	0.0	0.0	chrX	131445324	131445366	(24595529)	+	(TTCC)n	Simple_repeat	1	43	(0)	4538070
74	19.2	3.4	0.6	chrX	131445367	131445515	(24595380)	+	(TTTC)n	Simple_repeat	2	155	(0)	4538071
2098	15.6	0.0	0.0	chrX	131445516	131445822	(24595073)	C	AluSz6	SINE/Alu	(3)	309	3	4538072
2076	11.1	1.0	7.2	chrX	131682525	131682831	(24358064)	+	AluSx1	SINE/Alu	15	302	(10)	4538339
65	0.0	0.0	0.0	chrX	131682834	131682891	(24358004)	+	(AAGG)n	Simple_repeat	1	58	(0)	4538340
65	10.9	0.0	0.0	chrX	131682892	131682990	(24357905)	+	(GAGA)n	Simple_repeat	3	101	(0)	4538341
880	26.9	2.6	0.4	chrX	131682993	131683257	(24357638)	C	L1M4a2	LINE/L1	(592)	5592	5322	4538337
44	0.0	0.0	0.0	chrX	132044628	132044665	(23996230)	+	(TC)n	Simple_repeat	1	38	(0)	4538832
66	0.0	0.0	0.0	chrX	132203507	132203562	(23837333)	+	(GA)n	Simple_repeat	1	56	(0)	4539061
37	7.2	0.0	0.0	chrX	133262321	133262365	(22778530)	+	(TC)n	Simple_repeat	1	45	(0)	4540632
1667	15.2	5.1	1.1	chrX	133262367	133262629	(22778266)	C	AluSz	SINE/Alu	(38)	274	1	4540633
14	12.8	5.9	0.0	chrX	133414645	133414678	(22626217)	+	(CTCG)n	Simple_repeat	1	36	(0)	4540874
278	42.4	1.0	2.4	chrX	133549323	133549619	(22491276)	+	L2c	LINE/L2	2789	3081	(338)	4541175
92	31.5	0.6	4.1	chrX	133549620	133549985	(22490910)	+	(TCCC)n	Simple_repeat	1	368	(0)	4541176
45	0.0	2.4	0.0	chrX	133657899	133657940	(22382955)	+	(AG)n	Simple_repeat	1	43	(0)	4541360
85	7.9	2.4	0.0	chrX	133661561	133661683	(22379212)	+	(TC)n	Simple_repeat	1	126	(0)	4541368
1284	21.6	6.5	0.9	chrX	134010482	134010803	(22030092)	+	LTR90A	LTR	636	976	(0)	4541948
710	22.2	0.7	0.1	chrX	134279429	134279610	(21761285)	C	L1MD	LINE/L1	(1416)	4724	4542	4542374
37	0.0	0.0	0.0	chrX	134279611	134279642	(21761253)	+	(TC)n	Simple_repeat	1	32	(0)	4542378
1985	12.9	0.7	4.2	chrX	134451931	134452110	(21588785)	+	AluJr	SINE/Alu	122	292	(20)	4542689
57	0.0	1.9	0.0	chrX	134452114	134452165	(21588730)	+	(GA)n	Simple_repeat	1	53	(0)	4542691
51	22.3	0.0	0.9	chrX	134452167	134452278	(21588617)	+	G-rich	Low_complexity	1	112	(0)	4542692
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
37	2.8	0.0	0.0	chrX	134574056	134574091	(21466804)	+	(TC)n	Simple_repeat	1	36	(0)	4542967
28	20.4	0.0	0.0	chrX	134574092	134574147	(21466748)	+	(AC)n	Simple_repeat	1	56	(0)	4542968
33	13.2	0.0	0.0	chrX	134735629	134735679	(21305216)	+	(AG)n	Simple_repeat	1	51	(0)	4543283
2369	14.9	5.1	2.1	chrX	135000063	135000271	(21040624)	+	MSTB1	LTR/ERVL-MaLR	1	220	(212)	4543806
51	0.0	0.0	0.0	chrX	135000272	135000315	(21040580)	+	(TC)n	Simple_repeat	1	44	(0)	4543807
2369	14.9	5.1	2.1	chrX	135000316	135000524	(21040371)	+	MSTB1	LTR/ERVL-MaLR	221	431	(1)	4543806
306	28.8	8.3	2.5	chrX	135113922	135114124	(20926771)	+	L1ME4c	LINE/L1	459	674	(156)	4543957
24	8.9	2.8	0.0	chrX	135114127	135114162	(20926733)	+	(GA)n	Simple_repeat	1	37	(0)	4543958
93	14.6	0.0	0.0	chrX	136273571	136273721	(19767174)	+	(AG)n	Simple_repeat	1	151	(0)	4545706
187	33.1	13.1	3.6	chrX	136273747	136273884	(19767011)	C	MIRb	SINE/MIR	(112)	156	4	4545707
1473	33.2	5.3	7.9	chrX	136527003	136528052	(19512843)	+	L2b	LINE/L2	1574	2621	(798)	4546125
38	5.0	0.0	0.0	chrX	136528053	136528094	(19512801)	+	(CT)n	Simple_repeat	1	42	(0)	4546126
2077	15.7	0.0	2.0	chrX	136528095	136528399	(19512496)	C	AluJr	SINE/Alu	(12)	300	2	4546127
26	22.2	0.0	0.0	chrX	136673816	136673869	(19367026)	+	(CT)n	Simple_repeat	1	54	(0)	4546397
2144	12.1	1.0	0.0	chrX	136673874	136674163	(19366732)	C	AluSz	SINE/Alu	(17)	295	3	4546398
1882	21.2	9.8	2.8	chrX	136728598	136729000	(19311895)	+	MLT2B1	LTR/ERVL	20	455	(65)	4546475
63	0.0	0.0	0.0	chrX	136729001	136729054	(19311841)	+	(TC)n	Simple_repeat	1	54	(0)	4546476
213	23.0	14.4	8.9	chrX	136768687	136768810	(19272085)	C	Tigger19b	DNA/TcMar-Tigger	(236)	314	183	4546546
23	29.0	0.0	5.3	chrX	136768954	136769047	(19271848)	+	A-rich	Low_complexity	1	94	(0)	4546547
64	1.7	0.0	0.0	chrX	136939149	136939207	(19101688)	+	(AG)n	Simple_repeat	1	59	(0)	4546925
1792	15.6	0.4	1.1	chrX	136939210	136939485	(19101410)	C	AluJo	SINE/Alu	(38)	274	1	4546926
559	19.1	21.4	19.9	chrX	136964447	136964813	(19076082)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	4546987
110	16.5	0.4	3.5	chrX	137012106	137012333	(19028562)	+	(TTTC)n	Simple_repeat	1	229	(0)	4547052
2065	10.9	1.1	0.3	chrX	137012336	137012618	(19028277)	C	AluSx1	SINE/Alu	(6)	306	22	4547053
88	17.5	0.0	0.0	chrX	138130720	138130872	(17910023)	+	(TC)n	Simple_repeat	1	153	(0)	4548869
682	26.4	3.0	1.5	chrX	138130874	138131073	(17909822)	+	MLT1B	LTR/ERVL-MaLR	188	390	(0)	4548868
17	12.2	6.7	4.7	chrX	138336677	138336699	(17704196)	+	(TCTCT)n	Simple_repeat	1	24	(0)	4549148
54	3.7	0.0	0.0	chrX	138336700	138336754	(17704141)	+	(TC)n	Simple_repeat	1	55	(0)	4549149
17	12.2	6.7	4.7	chrX	138336755	138336790	(17704105)	+	(TCTCT)n	Simple_repeat	5	40	(0)	4549150
407	28.3	3.6	0.0	chrX	138336832	138336937	(17703958)	C	MLT1O	LTR/ERVL-MaLR	(352)	190	81	4549151
587	28.4	1.1	1.1	chrX	138865204	138865381	(17175514)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	4549819
86	0.0	6.4	0.0	chrX	138865423	138865516	(17175379)	+	(CT)n	Simple_repeat	1	100	(0)	4549820
1584	23.5	1.8	4.5	chrX	138953584	138954091	(17086804)	+	L1ME2	LINE/L1	5655	6148	(16)	4549954
36	0.0	2.9	0.0	chrX	138954096	138954129	(17086766)	+	(GA)n	Simple_repeat	1	35	(0)	4549956
280	21.8	5.2	0.0	chrX	138954144	138954198	(17086697)	+	MIRb	SINE/MIR	26	83	(185)	4549957
428	30.1	0.0	3.4	chrX	138954196	138954312	(17086583)	C	L2a	LINE/L2	(1)	3425	3313	4549958
103	28.0	3.4	0.6	chrX	139205825	139206144	(16834751)	+	GA-rich	Low_complexity	1	331	(0)	4550364
2824	13.5	1.6	7.0	chrX	139896132	139896546	(16144349)	+	L1MC3	LINE/L1	7199	7616	(169)	4551339
56	0.0	0.0	0.0	chrX	139896547	139896594	(16144301)	+	(AC)n	Simple_repeat	1	48	(0)	4551340
2824	13.5	1.6	7.0	chrX	139896595	139896619	(16144276)	+	L1MC3	LINE/L1	7617	7617	(168)	4551339
41	0.0	0.0	0.0	chrX	139896620	139896654	(16144241)	+	(TC)n	Simple_repeat	1	35	(0)	4551341
1306	11.5	7.2	1.0	chrX	139896655	139896863	(16144032)	C	AluSz	SINE/Alu	(51)	261	39	4551342
47	0.0	0.0	0.0	chrX	140742840	140742879	(15298016)	+	(AG)n	Simple_repeat	1	40	(0)	4552717
26	8.6	4.1	6.8	chrX	140742880	140742894	(15298001)	+	GA-rich	Low_complexity	1	54	(0)	4552718
25	7.9	2.4	0.0	chrX	140742895	140742935	(15297960)	+	(GGAAAG)n	Simple_repeat	1	42	(0)	4552719
2433	10.2	0.0	0.6	chrX	140742941	140743254	(15297641)	+	AluSx1	SINE/Alu	1	312	(0)	4552720
443	25.3	7.1	4.5	chrX	140761977	140762154	(15278741)	+	MIRc	SINE/MIR	85	267	(1)	4552753
40	0.0	0.0	0.0	chrX	140762210	140762243	(15278652)	+	(AG)n	Simple_repeat	1	34	(0)	4552754
69	0.0	0.0	0.0	chrX	141792760	141792818	(14248077)	+	(AG)n	Simple_repeat	1	59	(0)	4554326
750	24.6	2.5	1.7	chrX	142219698	142219884	(13821011)	C	L1MC3	LINE/L1	(4841)	1667	1481	4554888
63	0.0	1.8	0.0	chrX	142219885	142219941	(13820954)	+	(TC)n	Simple_repeat	1	58	(0)	4554892
750	24.6	2.5	1.7	chrX	142219942	142219989	(13820906)	C	L1MC3	LINE/L1	(5028)	1480	1430	4554888
49	9.3	0.0	0.0	chrX	142712047	142712115	(13328780)	+	(AG)n	Simple_repeat	1	69	(0)	4555545
73	0.0	0.0	0.0	chrX	143068091	143068152	(12972743)	+	(GA)n	Simple_repeat	1	62	(0)	4556028
269	22.9	0.0	0.0	chrX	143068160	143068220	(12972675)	+	MER92-int	LTR/ERV1	1281	1341	(3877)	4556029
20250	13.8	3.0	1.1	chrX	143523260	143529111	(12511784)	C	L1MA1	LINE/L1	(0)	7721	1769	4556673
66	0.0	0.0	0.0	chrX	143529112	143529167	(12511728)	+	(TC)n	Simple_repeat	1	56	(0)	4556674
18485	16.9	6.3	1.9	chrX	143529168	143530701	(12510194)	C	L1MA1	LINE/L1	(5797)	1768	132	4556673
75	2.7	1.3	0.0	chrX	147239329	147239404	(8801491)	+	(CT)n	Simple_repeat	1	77	(0)	4561559
46	2.3	0.0	0.0	chrX	148524081	148524124	(7516771)	+	(CT)n	Simple_repeat	1	44	(0)	4563436
30	0.0	0.0	0.0	chrX	148524125	148524157	(7516738)	+	(GT)n	Simple_repeat	1	33	(0)	4563437
39	24.1	2.0	0.0	chrX	149010690	149010787	(7030108)	+	GA-rich	Low_complexity	1	100	(0)	4564084
2951	11.6	9.0	3.0	chrX	149719916	149720386	(6320509)	+	LTR22C0	LTR/ERVK	1	502	(0)	4564966
11493	9.4	1.9	2.3	chrX	149827120	149829097	(6211798)	+	HERVIP10FH-int	LTR/ERV1	687	2401	(2701)	4565069
13	7.6	7.1	0.0	chrX	149830570	149830597	(6210298)	+	(AAAAG)n	Simple_repeat	1	30	(0)	4565071
35	0.0	0.0	0.0	chrX	149830732	149830761	(6210134)	+	(GA)n	Simple_repeat	1	30	(0)	4565072
3317	11.7	2.4	0.6	chrX	149830852	149831435	(6209460)	+	HERVIP10FH-int	LTR/ERV1	2041	2633	(2382)	4565073
3024	21.1	2.8	8.6	chrX	149866023	149866747	(6174148)	C	MER54B	LTR/ERVL	(0)	793	112	4565104
43	0.0	0.0	0.0	chrX	150326245	150326281	(5714614)	+	(TC)n	Simple_repeat	1	37	(0)	4565731
25	20.4	0.0	3.0	chrX	150326283	150326348	(5714547)	+	(TCTGTC)n	Simple_repeat	1	66	(0)	4565732
37	2.9	0.0	0.0	chrX	150423605	150423640	(5617255)	+	(AG)n	Simple_repeat	1	36	(0)	4565870
48	4.1	0.0	0.0	chrX	150469607	150469656	(5571239)	+	(CT)n	Simple_repeat	1	50	(0)	4565929
27	0.0	0.0	0.0	chrX	150469657	150469686	(5571209)	+	(GT)n	Simple_repeat	1	30	(0)	4565930
26	7.2	4.4	0.0	chrX	150469686	150469735	(5571160)	+	(TCTCT)n	Simple_repeat	1	52	(0)	4565931
1533	14.9	0.0	0.0	chrX	150546221	150546448	(5494447)	C	AluSz6	SINE/Alu	(29)	283	56	4566060
292	31.2	7.7	1.0	chrX	150546452	150546502	(5494393)	C	L2b	LINE/L2	(11)	3364	3314	4566061
44	2.4	0.0	0.0	chrX	150546503	150546544	(5494351)	+	(GA)n	Simple_repeat	1	42	(0)	4566062
292	31.2	7.7	1.0	chrX	150546545	150546589	(5494306)	C	L2b	LINE/L2	(62)	3313	3261	4566061
313	31.4	4.1	6.3	chrX	150546595	150546720	(5494175)	C	MIRb	SINE/MIR	(29)	239	117	4566063
1858	14.7	0.3	0.3	chrX	152145904	152146175	(3894720)	C	L1M1	LINE/L1	(5530)	2035	1765	4568575
51	1.9	1.8	1.8	chrX	152146176	152146231	(3894664)	+	(TC)n	Simple_repeat	1	57	(0)	4568576
1858	14.7	0.3	0.3	chrX	152146232	152146244	(3894651)	C	L1M1	LINE/L1	(5801)	1764	1751	4568575
1708	23.4	5.3	1.9	chrX	152146258	152146341	(3894554)	C	L1MC3	LINE/L1	(6434)	433	351	4568572
2210	16.2	8.1	0.2	chrX	152146342	152146742	(3894153)	+	MER57F	LTR/ERV1	1	435	(0)	4568577
911	18.6	22.5	4.1	chrX	152576274	152576443	(3464452)	+	MLT1A1	LTR/ERVL-MaLR	1	171	(237)	4569128
83	2.5	0.0	0.0	chrX	152576444	152576523	(3464372)	+	(TC)n	Simple_repeat	1	80	(0)	4569129
911	18.6	22.5	4.1	chrX	152576524	152576672	(3464223)	+	MLT1A1	LTR/ERVL-MaLR	172	396	(12)	4569128
2481	17.9	4.7	9.2	chrX	152981331	152981549	(3059346)	+	MLT2B2	LTR/ERVL	1	229	(286)	4569695
29	8.6	2.0	1.9	chrX	152981550	152981600	(3059295)	+	(TC)n	Simple_repeat	1	52	(0)	4569696
2481	17.9	4.7	9.2	chrX	152981601	152981921	(3058974)	+	MLT2B2	LTR/ERVL	230	514	(1)	4569695
41	8.2	0.0	0.0	chrX	153822624	153822676	(2218219)	+	(TC)n	Simple_repeat	1	53	(0)	4570774
1333	17.0	1.3	0.9	chrX	153822677	153822890	(2218005)	C	AluJr	SINE/Alu	(11)	301	86	4570775
14	19.1	1.8	7.1	chrX	153935042	153935096	(2105799)	+	(GCCG)n	Simple_repeat	1	56	(0)	4570963
40	28.7	6.2	1.5	chrX	153970428	153970619	(2070276)	+	GA-rich	Low_complexity	1	204	(0)	4570994
13	10.4	2.9	5.6	chrX	153970720	153970754	(2070141)	+	(TGGCCG)n	Simple_repeat	1	36	(0)	4570995
14	23.4	0.0	2.4	chrX	153971840	153971881	(2069014)	+	(GGC)n	Simple_repeat	1	42	(0)	4570996
2299	24.7	11.8	2.1	chrX	154046473	154047404	(1993491)	+	HAL1b	LINE/L1	377	1410	(1011)	4571146
11	21.2	0.0	2.9	chrX	154097219	154097253	(1943642)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	4571249
12	29.0	1.6	3.2	chrX	154097422	154097483	(1943412)	+	G-rich	Low_complexity	1	63	(0)	4571250
477	26.9	13.2	1.4	chrX	154595414	154595626	(1445269)	+	MER5C	DNA/hAT-Charlie	20	262	(51)	4572140
126	3.8	6.8	0.5	chrX	154595631	154595821	(1445074)	+	(GA)n	Simple_repeat	1	204	(0)	4572141
311	28.7	5.4	8.2	chrX	154595822	154595992	(1444903)	C	L1M6B	LINE/L1	(187)	182	17	4572142
1908	13.7	3.2	1.4	chrX	154962592	154962869	(1078026)	+	AluJo	SINE/Alu	1	283	(29)	4572675
50	2.0	0.0	1.9	chrX	154962870	154962921	(1077974)	+	(AG)n	Simple_repeat	1	52	(0)	4572676
570	35.4	5.5	2.0	chrX	154962922	154963027	(1077868)	C	L2	LINE/L2	(2806)	613	510	4572674
2184	26.1	12.1	6.4	chrX	155248391	155249094	(791801)	+	L2a	LINE/L2	2178	2955	(464)	4573103
42	0.0	0.0	0.0	chrX	155249095	155249130	(791765)	+	(CT)n	Simple_repeat	1	36	(0)	4573107
2184	28.3	11.0	5.0	chrX	155249131	155249413	(791482)	+	L2a	LINE/L2	2937	3242	(184)	4573103
73	0.0	4.1	0.0	chrX	155616101	155616173	(424722)	+	(TC)n	Simple_repeat	1	76	(0)	4573538