64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
2369	24.5	5.0	4.4	chr1	8730914	8731774	(240224648)	+	L1MCb	LINE/L1	13	878	(5167)	12134
32	4.7	0.0	4.2	chr1	8731775	8731822	(240224600)	+	(TGTT)n	Simple_repeat	1	48	(0)	12135
23	19.2	1.9	0.0	chr1	16565983	16566036	(232390386)	+	GA-rich	Low_complexity	1	55	(0)	27764
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
1712	23.6	4.8	0.2	chr1	56172724	56173165	(192783257)	C	L1MCb	LINE/L1	(4918)	1127	665	108321
477	26.2	9.6	2.2	chr1	56173167	56173349	(192783073)	C	L1MCb	LINE/L1	(6271)	480	283	108321
653	31.7	13.5	5.0	chr1	61572114	61572727	(187383695)	C	LTR78B	LTR/ERV1	(151)	1145	472	118381
2229	28.7	4.3	5.8	chr1	98419165	98420090	(150536332)	+	L1MCb	LINE/L1	3	913	(5132)	173400
412	7.3	0.0	0.0	chr1	98420088	98420142	(150536280)	+	L1M2	LINE/L1	3381	3435	(2708)	173401
30	4.8	5.7	4.0	chr1	125151026	125151095	(123805327)	+	(GATTCCATTC)n	Simple_repeat	1	74	(0)	207451
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
2427	15.7	6.9	1.5	chr1	151933993	151934469	(97021953)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	222144
448	31.1	11.6	3.7	chr1	154024260	154024449	(94931973)	+	MIRb	SINE/MIR	43	249	(19)	225282
1569	19.0	0.3	3.1	chr1	154024542	154024831	(94931591)	C	AluJr	SINE/Alu	(30)	282	1	225283
303	32.4	15.5	0.7	chr1	158470575	158470854	(90485568)	+	L2a	LINE/L2	2475	2803	(616)	233107
357	23.5	1.0	1.0	chr1	158470851	158470949	(90485473)	+	MIR	SINE/MIR	164	262	(0)	233108
7737	14.3	3.0	1.0	chr1	209715946	209717572	(39238850)	+	L1MA4A	LINE/L1	3996	5665	(635)	310087
346	26.7	8.7	0.8	chr1	210654377	210654493	(38301929)	+	L2b	LINE/L2	3245	3371	(4)	311476
4081	24.0	3.2	2.6	chr1	215294339	215295660	(33660762)	+	L1MCb	LINE/L1	7	1425	(5326)	318924
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
3430	23.5	4.6	8.6	chr1	227848216	227849417	(21107005)	C	L1MCb	LINE/L1	(5507)	1244	1	337971
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
426	19.8	1.0	0.0	chr1	235161595	235161690	(13794732)	+	L1MC4	LINE/L1	7946	8042	(0)	349156
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
16	15.1	2.6	2.5	chr1	243849367	243849405	(5107017)	+	(ACCC)n	Simple_repeat	1	40	(0)	363166
463	34.1	8.1	12.0	chr10	8574510	8574948	(125222474)	C	L2	LINE/L2	(549)	2870	2450	383005
1549	19.2	0.8	0.0	chr10	8574949	8575208	(125222214)	C	AluJb	SINE/Alu	(8)	304	43	383006
314	20.9	0.0	1.5	chr10	61775225	61775292	(72022130)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	544	459029
1073	30.6	8.6	3.5	chr10	61775320	61775746	(72021676)	C	MLT1L	LTR/ERVL-MaLR	(141)	469	19	459029
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
13	23.5	0.0	0.0	chr10	132364785	132364819	(1432603)	+	(CCCA)n	Simple_repeat	1	35	(0)	571578
101	23.0	6.5	5.3	chr10	132364820	132364843	(1432579)	+	(CACTCA)n	Simple_repeat	558	586	(0)	571577
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
2281	10.3	0.7	0.0	chr11	643045	643345	(134443277)	+	AluSx1	SINE/Alu	1	303	(9)	573679
497	26.7	5.7	0.6	chr11	12963982	12964147	(122122475)	+	MER45A	DNA/hAT-Tip100	4	178	(0)	591575
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
886	19.3	23.5	7.6	chr12	4320348	4320728	(128954581)	C	MER31B	LTR/ERV1	(0)	466	7	785341
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1695	20.2	12.7	15.7	chr12	19889372	19890395	(113384914)	+	Charlie2b	DNA/hAT-Charlie	1790	2778	(4)	808901
188	32.6	16.1	2.1	chr12	19890547	19890690	(113384619)	+	L2c	LINE/L2	3041	3208	(179)	808899
3334	20.0	6.2	1.4	chr12	31668801	31669675	(101605634)	C	L1MCb	LINE/L1	(4851)	1194	275	825773
2388	10.9	0.0	0.0	chr12	100572531	100572842	(32702467)	+	AluJb	SINE/Alu	1	312	(0)	925849
233	32.8	2.2	3.6	chr12	100572843	100572899	(32702410)	C	MIR3	SINE/MIR	(190)	78	19	925848
15	4.3	0.0	3.9	chr12	100572905	100572930	(32702379)	+	(TTAT)n	Simple_repeat	1	26	(0)	925850
19	0.0	6.7	0.0	chr12	100573047	100573076	(32702233)	+	(TTGTT)n	Simple_repeat	1	32	(0)	925851
2537	23.1	8.2	5.9	chr13	79584160	79585044	(34779284)	+	L1MCb	LINE/L1	1	907	(5138)	1079151
282	14.9	0.0	0.0	chr13	79585076	79585122	(34779206)	C	MLT1G1	LTR/ERVL-MaLR	(301)	294	248	1079152
3949	21.3	6.0	3.5	chr13	92904775	92906787	(21457541)	+	L1MCa	LINE/L1	249	2098	(4653)	1096164
966	26.3	0.8	3.7	chr14	70027588	70027832	(37015886)	+	MIRb	SINE/MIR	22	259	(9)	1200562
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
707	24.3	4.9	1.0	chr14	105568893	105571171	(1472547)	+	(CA)n	Simple_repeat	1	2390	(0)	1259850
684	31.6	9.3	5.0	chr14	106580115	106580779	(462939)	C	MER4B-int	LTR/ERV1	(2972)	3786	3090	1260842
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2776	24.8	3.7	4.0	chr15	66805667	66806553	(35184636)	+	L1MC2	LINE/L1	1	885	(5160)	1335489
2090	15.1	0.3	0.3	chr15	66806554	66806878	(35184311)	+	AluSx1	SINE/Alu	1	312	(0)	1335490
251	30.5	17.3	0.0	chr15	77699142	77699309	(24291880)	+	MIR3	SINE/MIR	55	263	(5)	1354493
185	35.2	3.3	3.3	chr15	77699788	77699878	(24291311)	+	L2c	LINE/L2	3293	3383	(4)	1354494
863	9.0	0.0	0.0	chr16	4313729	4313839	(86024506)	C	AluJr	SINE/Alu	(201)	111	1	1400929
64	12.6	0.8	3.2	chr16	5500073	5500194	(84838151)	+	(CCTC)n	Simple_repeat	1	123	(0)	1403414
35	11.0	0.0	0.0	chr16	5500196	5500255	(84838090)	+	(CATTC)n	Simple_repeat	1	60	(0)	1403415
1598	17.6	0.8	0.4	chr16	5500260	5500521	(84837824)	C	AluJr	SINE/Alu	(49)	263	1	1403416
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
318	21.8	0.0	0.0	chr16	34066270	34066324	(56272021)	+	AluYj4	SINE/Alu	224	278	(33)	1463572
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
574	28.8	8.3	2.8	chr16	63229317	63229566	(27108779)	+	L2a	LINE/L2	3126	3390	(36)	1494560
51	0.0	0.0	0.0	chr16	87167969	87168012	(3170333)	+	(AC)n	Simple_repeat	1	44	(0)	1537927
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
3370	23.7	9.0	2.4	chr17	13207816	13209471	(70047970)	+	HAL1ME	LINE/L1	12	2328	(4709)	1569398
205	28.8	2.7	5.2	chr17	19377611	19377687	(63879754)	+	L2b	LINE/L2	3300	3374	(1)	1580482
2404	11.8	2.7	2.7	chr17	19792986	19793360	(63464081)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1581266
1881	20.2	3.1	5.0	chr17	19793361	19793584	(63463857)	+	L1M4	LINE/L1	4843	5052	(1094)	1581265
3188	16.6	5.3	6.8	chr17	19793591	19794241	(63463200)	+	L1MCa	LINE/L1	724	1431	(5320)	1581267
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
14076	21.5	0.2	0.1	chr17	26878921	26879385	(56378056)	+	(TGGAA)n	Simple_repeat	4	470	(0)	1585978
354	19.1	1.6	0.0	chr17	26879386	26879448	(56377993)	+	AluYj4	SINE/Alu	224	287	(24)	1585979
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
341	33.6	2.2	0.0	chr17	73586756	73586886	(9670555)	C	MIRc	SINE/MIR	(15)	253	120	1672600
449	29.1	15.3	0.0	chr17	73586887	73587058	(9670383)	+	MIRb	SINE/MIR	29	231	(37)	1672601
121	22.7	0.4	8.2	chr17	80929972	80930312	(2327129)	+	(CTCAG)n	Simple_repeat	1	313	(0)	1685673
32	10.5	0.0	6.5	chr17	80930313	80930405	(2327036)	+	(CAGCT)n	Simple_repeat	1	93	(0)	1685674
121	22.7	0.4	8.2	chr17	80930406	80930537	(2326904)	+	(CTCAG)n	Simple_repeat	4	127	(0)	1685675
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1714	26.6	9.7	9.3	chr18	74617198	74618378	(5754907)	C	L1MC4	LINE/L1	(138)	7904	6719	1790144
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
565	23.3	0.2	0.2	chr2	5022390	5023594	(237169935)	+	(CTACTA)n	Simple_repeat	1	1208	(0)	1916517
13	25.6	3.4	3.3	chr2	27217329	27217387	(214976142)	+	(CCG)n	Simple_repeat	1	61	(0)	1951395
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
385	28.9	7.5	7.2	chr2	54144995	54145285	(188048244)	C	L1M2	LINE/L1	(3139)	3004	2713	1993854
234	18.0	6.2	0.0	chr2	54145310	54145370	(188048159)	C	MLT1L	LTR/ERVL-MaLR	(6)	604	540	1993855
548	24.1	3.9	3.5	chr2	54145477	54145678	(188047851)	C	L1MC5a	LINE/L1	(2)	2775	2573	1993856
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
79	4.4	1.0	1.0	chr2	91423327	91423422	(150770107)	+	(CCATT)n	Simple_repeat	1	97	(0)	2048315
586	32.0	13.2	1.7	chr2	91423556	91424264	(150769265)	C	L1MEd	LINE/L1	(4472)	1753	942	2048316
5462	12.5	6.7	4.1	chr2	123467943	123468835	(118724694)	+	MER4B-int	LTR/ERV1	259	1180	(5578)	2091799
280	7.2	0.0	4.5	chr2	153871074	153871117	(88322412)	C	MIR	SINE/MIR	(32)	230	189	2134206
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
6844	22.3	7.2	5.7	chr2	164331043	164334788	(77858741)	C	L1MCa	LINE/L1	(1883)	4681	868	2148161
1940	33.8	11.9	4.9	chr2	198451680	198453958	(43739571)	+	L2a	LINE/L2	192	2651	(768)	2195554
1387	23.2	1.4	1.4	chr2	200011206	200011554	(42181975)	+	L1MCb	LINE/L1	599	947	(5098)	2197688
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
364	22.7	1.1	0.0	chr2	231832103	231832190	(10361339)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
310	24.2	3.2	0.0	chr2	231832191	231832279	(10361250)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
268	25.3	2.2	0.0	chr2	231832282	231832368	(10361161)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
339	22.0	3.2	0.0	chr2	231832369	231832457	(10361072)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
326	23.1	3.2	0.0	chr2	231832458	231832546	(10360983)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
363	20.9	3.2	0.0	chr2	231832547	231832635	(10360894)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
331	23.9	2.1	0.0	chr2	231832636	231832725	(10360804)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
360	23.2	2.0	2.0	chr2	231832753	231832853	(10360676)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247713
1966	23.1	0.2	0.1	chr20	63841	67292	(64376875)	+	(ATTCC)n	Simple_repeat	2	3456	(0)	2262202
186	28.2	16.1	2.5	chr20	2236529	2236608	(62207559)	C	L2c	LINE/L2	(4)	3383	3291	2266552
14369	11.7	5.9	1.2	chr20	14172605	14175215	(50268952)	C	L1PBa	LINE/L1	(3957)	2906	3	2286036
889	25.3	0.0	0.5	chr20	14175228	14175426	(50268741)	C	L1MCb	LINE/L1	(5228)	817	620	2286034
683	26.3	3.2	1.1	chr20	14175430	14175610	(50268557)	C	L1MCa	LINE/L1	(5775)	733	549	2286038
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
247	29.6	0.0	2.2	chr20	31879340	31879410	(32564757)	+	L1M5	LINE/L1	5444	5512	(932)	2307084
550	30.9	4.1	3.8	chr20	33414698	33414963	(31029204)	+	MLT1J	LTR/ERVL-MaLR	239	505	(7)	2310651
254	31.2	2.7	2.7	chr20	33414968	33415079	(31029088)	+	LTR103_Mam	LTR/ERV1?	363	474	(1)	2310652
24	33.8	6.2	0.0	chr20	33415112	33415273	(31028894)	+	(ACACAT)n	Simple_repeat	1	172	(0)	2310653
50	19.6	2.6	0.0	chr20	59767777	59767892	(4676275)	+	(TTTCC)n	Simple_repeat	1	119	(0)	2365011
21	28.8	1.1	3.3	chr20	59767907	59767995	(4676172)	+	(TCTC)n	Simple_repeat	1	90	(0)	2365012
241	29.6	7.5	0.0	chr20	61331809	61331925	(3112242)	+	L2a	LINE/L2	3253	3426	(0)	2367236
222	27.5	3.5	5.2	chr20	61331948	61332062	(3112105)	+	L2b	LINE/L2	3258	3370	(5)	2367237
1142	23.0	0.4	0.2	chr21	5327288	5328868	(41381115)	+	(TGGAA)n	Simple_repeat	1	1581	(0)	2371008
1142	23.0	0.4	0.2	chr21	5328933	5329957	(41380026)	+	(TGGAA)n	Simple_repeat	2	1031	(0)	2371010
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8464121	8465014	(38244969)	+	(CTCT)n	Simple_repeat	1	897	(0)	2373686
53	2.0	0.0	0.0	chr21	8465015	8465064	(38244919)	+	(GT)n	Simple_repeat	1	50	(0)	2373687
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
565	9.4	2.3	0.0	chr21	8875232	8875316	(37834667)	+	L1PA5	LINE/L1	6066	6152	(2)	2374090
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
312	21.5	5.8	0.0	chr21	9248928	9248992	(37460991)	+	AluJb	SINE/Alu	225	293	(19)	2374343
76	18.0	0.0	0.0	chr21	9248994	9249134	(37460849)	+	(AATGG)n	Simple_repeat	1	141	(0)	2374344
2558	6.4	0.9	0.0	chr21	9249136	9249479	(37460504)	+	L1P1	LINE/L1	3726	4072	(2074)	2374345
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
3076	15.8	1.1	0.9	chr22	10721335	10730387	(40088081)	+	(TCCATTCCAT)n	Simple_repeat	1	9151	(0)	2424547
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
1337	23.7	9.5	0.3	chr22	11915408	11915741	(38902727)	+	MSTA	LTR/ERVL-MaLR	1	368	(60)	2425528
1290	17.5	1.7	0.0	chr22	11915771	11916004	(38902464)	+	MSTA-int	LTR/ERVL-MaLR	13	250	(1401)	2425529
24888	7.0	0.5	0.1	chr22	12031367	12037491	(38780977)	C	L1PA4	LINE/L1	(3)	6325	176	2425613
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
2091	8.8	6.9	0.0	chr22	18149659	18149942	(32668526)	+	AluSx	SINE/Alu	1	305	(7)	2430308
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
5944	18.1	5.3	3.9	chr22	43584224	43586340	(7232128)	+	L1MCb	LINE/L1	95	2702	(295)	2480468
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
336	34.9	11.6	2.9	chr3	63617051	63617618	(134677941)	C	L2b	LINE/L2	(1)	3374	2750	2594348
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
949	27.2	5.1	4.2	chr5	3659659	3659988	(177878271)	C	L1MD2	LINE/L1	(7)	6352	6020	3058563
1059	26.2	3.1	1.7	chr5	3660215	3660501	(177877758)	C	L1MD1	LINE/L1	(168)	6074	5784	3058564
2960	13.6	11.7	3.8	chr5	42986670	42987083	(138551176)	C	MER4A1_	LTR/ERV1	(0)	600	138	3112364
2193	12.1	0.3	0.0	chr5	42987084	42987380	(138550879)	C	AluSp	SINE/Alu	(15)	298	1	3112365
930	21.6	4.5	8.2	chr5	44519990	44520357	(137017902)	C	L1MCb	LINE/L1	(5355)	1396	1043	3114366
3041	25.0	4.2	3.5	chr5	44520354	44521249	(137017010)	C	L1MCb	LINE/L1	(5142)	903	1	3114366
37	21.3	6.7	0.0	chr5	74193880	74193998	(107344261)	+	(ATTTAG)n	Simple_repeat	1	127	(0)	3151627
463	28.3	8.6	3.3	chr5	74194027	74194267	(107343992)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	256	3151628
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
258	29.6	1.0	0.4	chr6	1053542	1054327	(169751652)	+	(ACATAG)n	Simple_repeat	1	794	(0)	3315567
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2267	29.4	4.7	1.3	chr6	120878562	120879329	(49926650)	+	L1MCb	LINE/L1	5	799	(5246)	3488294
1313	23.4	8.5	1.2	chr6	120879329	120880103	(49925876)	+	L1MCb	LINE/L1	1974	3178	(3380)	3488294
62	34.2	0.0	0.0	chr6	160218307	160218506	(10587473)	+	(CAG)n	Simple_repeat	1	200	(0)	3545195
201	19.6	3.8	5.6	chr6	160218508	160218561	(10587418)	+	OldhAT1	DNA/hAT-Ac	2005	2057	(791)	3545196
31	13.9	0.0	0.0	chr6	160218913	160218977	(10587002)	+	(CAG)n	Simple_repeat	1	65	(0)	3545197
182	24.7	1.3	0.0	chr6	170452770	170453217	(352762)	+	(GT)n	Simple_repeat	1	454	(0)	3557445
5426	22.9	9.4	13.0	chr7	18604697	18605675	(140740298)	C	L1MC2	LINE/L1	(5444)	1064	319	3585552
659	30.1	11.2	8.7	chr7	48462809	48463740	(110882233)	C	L1MEj	LINE/L1	(1172)	988	37	3629947
60	16.8	2.1	2.8	chr7	48463745	48463884	(110882089)	+	GA-rich	Low_complexity	1	143	(0)	3629949
193	25.3	0.0	19.4	chr7	48463948	48464055	(110881918)	+	MER5A	DNA/hAT-Charlie	96	182	(7)	3629950
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
356	19.7	2.9	0.0	chr7	57493917	57493982	(101851991)	+	AluYj4	SINE/Alu	226	293	(18)	3642543
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
29	2.5	0.0	6.5	chr7	58119103	58119148	(101226825)	+	(GATTCCATTC)n	Simple_repeat	1	46	(0)	3643248
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
14784	16.6	3.8	5.9	chr7	119267630	119271826	(40074147)	C	L1PA16	LINE/L1	(2738)	4111	5	3734952
187	8.8	3.5	3.1	chr7	138174221	138174560	(21171413)	+	GA-rich	Low_complexity	1	352	(0)	3763045
2416	18.5	3.6	0.8	chr7	138174571	138175061	(21170912)	+	L1MCa	LINE/L1	628	1132	(4913)	3763046
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
333	24.5	3.8	5.6	chr7	150004295	150004402	(9341571)	+	U6	snRNA	1	106	(1)	3781445
4341	20.4	9.4	9.2	chr7	156854085	156855945	(2490028)	+	L1MCa	LINE/L1	3	1887	(4864)	3791447
2785	19.3	4.6	1.6	chr7	158039277	158040303	(1305670)	+	L1MCa	LINE/L1	500	1636	(5115)	3792952
2394	10.3	11.7	0.5	chr7	158594718	158595097	(750876)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3793407
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
425	29.1	7.6	1.6	chr8	8701158	8701342	(136437294)	C	LTR37A	LTR/ERV1	(146)	280	84	3805178
3428	14.9	2.6	0.0	chr8	39763249	39763805	(105374831)	+	LTR43B	LTR/ERV1	1	572	(0)	3854298
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
2228	17.6	2.9	5.7	chr8	85769394	85769806	(59368830)	+	L1MA8	LINE/L1	5887	6286	(5)	3914995
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
304	36.7	7.7	4.4	chr9	10168939	10169189	(128225528)	+	LTR88b	LTR/Gypsy?	52	311	(526)	4023375
2737	3.6	0.0	0.0	chr9	10169193	10169493	(128225224)	+	AluY	SINE/Alu	1	301	(10)	4023376
2447	4.7	1.2	1.7	chr9	17757162	17757506	(120637211)	+	L1PA5	LINE/L1	5000	5342	(804)	4033755
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2448	9.2	1.6	4.8	chr9	68570552	68570927	(69823790)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4080060
320	26.1	14.4	1.6	chr9	68570966	68571086	(69823631)	C	MIR3	SINE/MIR	(50)	158	20	4080061
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
296	26.2	1.9	3.7	chr9	70038730	70038836	(68355881)	+	MER102c	DNA/hAT-Charlie	201	305	(26)	4082517
77	8.8	0.0	0.0	chr9	76175202	76175310	(62219407)	+	(GAATG)n	Simple_repeat	1	109	(0)	4092041
20	6.9	0.0	0.0	chr9	76175311	76175341	(62219376)	+	(AGAAC)n	Simple_repeat	1	31	(0)	4092042
732	13.9	7.4	0.0	chr9	79453298	79453434	(58941283)	C	L1M4	LINE/L1	(1838)	4308	4161	4097258
3635	26.5	3.5	4.1	chr9	79453437	79454552	(58940165)	C	L1MC3	LINE/L1	(4936)	1109	1	4097255
2290	17.6	3.8	1.0	chr9	80033801	80034214	(58360503)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4098097
4325	22.8	2.7	5.9	chr9	113928101	113929474	(24465243)	C	L1MCb	LINE/L1	(5341)	1410	1	4152651
270	19.9	0.7	0.2	chr9	130958574	130959111	(7435606)	+	(CACCAC)n	Simple_repeat	1	542	(0)	4186091
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
23	20.0	4.2	2.7	chrX	24150334	24150405	(131890490)	+	(GGC)n	Simple_repeat	1	75	(0)	4398944
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
11534	22.1	7.8	7.7	chrX	75326408	75329359	(80711536)	+	HERVK9-int	LTR/ERVK	3062	6020	(1)	4466634
196	26.4	16.7	0.0	chrX	151082245	151082369	(4958526)	+	MIR3	SINE/MIR	40	189	(19)	4567087
308	18.4	0.0	0.0	chrY	10652497	10652545	(46574870)	C	AluYa8	SINE/Alu	(39)	271	223	4587883
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
511	25.4	0.8	0.6	chrY	10671966	10672627	(46554788)	+	(CCATT)n	Simple_repeat	2	665	(0)	4587949
31	28.2	0.0	0.0	chrY	10673697	10673783	(46553632)	+	(CCATT)n	Simple_repeat	1	87	(0)	4587962
135	9.1	0.0	0.0	chrY	10673793	10673981	(46553434)	+	(CATTC)n	Simple_repeat	1	189	(0)	4587963
372	21.9	1.4	0.0	chrY	10678453	10678525	(46548890)	C	AluYj4	SINE/Alu	(14)	297	224	4587980
83	9.2	1.9	1.9	chrY	10678539	10678694	(46548721)	+	(ATTCC)n	Simple_repeat	1	159	(0)	4587981
251	27.9	2.9	0.0	chrY	10678699	10678766	(46548649)	C	AluYj4	SINE/Alu	(17)	294	225	4587982
49	8.8	0.0	0.0	chrY	10678779	10678850	(46548565)	+	(CCATT)n	Simple_repeat	1	72	(0)	4587983
295	25.5	3.4	0.7	chrY	10678851	10678946	(46548469)	C	AluJb	SINE/Alu	(12)	290	192	4587984
328	20.6	3.1	0.0	chrY	10686758	10686820	(46540595)	C	FRAM	SINE/Alu	(13)	153	89	4587996
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
322	25.1	3.0	0.5	chrY	10693618	10693705	(46533710)	C	AluY	SINE/Alu	(7)	295	207	4588025
222	19.6	0.7	0.7	chrY	10693706	10694157	(46533258)	+	(TTCCA)n	Simple_repeat	1	455	(0)	4588026
6112	24.5	0.6	0.4	chrY	10925266	10926566	(46300849)	+	(TTCCA)n	Simple_repeat	4	1309	(0)	4588455
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
4917	25.0	0.5	0.3	chrY	10945942	10948880	(46278535)	+	(TCCAC)n	Simple_repeat	1	2949	(0)	4588499
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
301	17.0	0.0	0.0	chrY	10958417	10958463	(46268952)	C	AluYj4	SINE/Alu	(41)	270	224	4588520
226	15.8	0.0	5.0	chrY	10958430	10958469	(46268946)	+	SVA_F	Retroposon/SVA	332	369	(1006)	4588521
1259	23.0	0.4	0.6	chrY	10958474	10959925	(46267490)	+	(CATTC)n	Satellite	1	1451	(0)	4588522
39	30.8	0.7	2.0	chrY	10967363	10967485	(46259930)	+	(CCATT)n	Simple_repeat	1	122	(0)	4588544
88	4.3	0.0	0.0	chrY	10967486	10967581	(46259834)	+	(TCCAT)n	Simple_repeat	1	96	(0)	4588545
39	30.8	0.7	2.0	chrY	10967582	10967606	(46259809)	+	(CCATT)n	Simple_repeat	3	27	(0)	4588546
344	18.8	1.5	0.0	chrY	10967607	10967670	(46259745)	C	AluYj4	SINE/Alu	(23)	288	224	4588547
285	19.0	1.7	3.3	chrY	10967630	10967689	(46259726)	+	SVA_C	Retroposon/SVA	336	394	(990)	4588548
258	28.4	0.0	0.0	chrY	10974044	10974110	(46253305)	C	AluJb	SINE/Alu	(11)	291	225	4588566
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
294	21.8	0.0	0.0	chrY	11024506	11024560	(46202855)	C	AluYj4	SINE/Alu	(33)	278	224	4588731
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
321	23.5	2.9	0.0	chrY	11039221	11039288	(46188127)	C	AluSz6	SINE/Alu	(18)	294	225	4588770
780	10.9	0.5	0.6	chrY	11181817	11186194	(46041221)	+	CER	Satellite	1	4374	(0)	4588950
741	17.6	1.4	0.7	chrY	11186186	11186322	(46041093)	+	MLT1A0	LTR/ERVL-MaLR	226	363	(2)	4588951
338	21.0	6.9	0.0	chrY	11281975	11282055	(45945360)	C	MER21C	LTR/ERVL	(822)	116	30	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165
2520	29.1	0.4	0.0	chrY	26668441	26670861	(30556554)	+	(ATGGA)n	Simple_repeat	1	2429	(0)	4607174