12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
15	19.8	7.5	2.8	chr1	1407559	1407625	(247548797)	+	G-rich	Low_complexity	1	72	(0)	1698
646	28.3	3.6	5.4	chr1	1411539	1411668	(247544754)	C	MER74B	LTR/ERVL	(278)	344	212	1707
20	0.0	10.0	2.3	chr1	1411848	1411887	(247544535)	+	(CCAGGTC)n	Simple_repeat	1	44	(0)	1711
104	0.9	0.7	14.3	chr1	1411892	1412196	(247544226)	+	(GTCCCAG)n	Simple_repeat	1	307	(0)	1712
368	19.1	4.5	0.0	chr1	1609966	1610049	(247346373)	+	MER65D	LTR/ERV1	1	88	(443)	2051
400	36.0	3.6	4.0	chr1	1610095	1610181	(247346241)	+	MER65D	LTR/ERV1	181	266	(207)	2051
13	21.0	3.2	6.2	chr1	2195398	2195459	(246760963)	+	(CTGGCCC)n	Simple_repeat	1	64	(0)	2984
13	18.7	0.0	5.0	chr1	2585490	2585529	(246370893)	+	(GCTCTGG)n	Simple_repeat	1	40	(0)	3363
743	18.6	27.0	0.8	chr1	6200566	6201073	(242755349)	+	LTR50	LTR/ERVL	29	793	(2)	7815
28	21.9	0.0	3.8	chr1	6554193	6554272	(242402150)	+	G-rich	Low_complexity	1	80	(0)	8454
4092	8.5	1.8	0.2	chr1	8122631	8123171	(240833251)	C	MER41A	LTR/ERV1	(4)	550	1	10968
1017	30.8	8.9	2.4	chr1	8123172	8123386	(240833036)	C	L1MC4	LINE/L1	(242)	7800	7553	10967
12	15.3	3.5	0.0	chr1	8611901	8611929	(240344493)	+	(CCTC)n	Simple_repeat	1	30	(0)	11934
13	18.2	2.6	2.5	chr1	9539663	9539701	(239416721)	+	(CGGCGA)n	Simple_repeat	1	40	(0)	13848
267	20.7	1.7	1.7	chr1	10510664	10510722	(238445700)	+	L2c	LINE/L2	3329	3387	(0)	15960
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
465	20.5	2.4	13.5	chr1	12075463	12075654	(236880768)	C	MLT1D	LTR/ERVL-MaLR	(274)	231	62	19088
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
863	13.5	0.0	0.8	chr1	12218393	12218518	(236737904)	+	AluJr	SINE/Alu	1	125	(187)	19420
500	9.4	0.0	0.0	chr1	12218534	12218597	(236737825)	+	AluJb	SINE/Alu	226	289	(23)	19421
261	29.0	12.3	1.0	chr1	12218610	12218710	(236737712)	C	MIRc	SINE/MIR	(35)	233	120	19422
1987	13.8	0.7	0.3	chr1	12449843	12450132	(236506290)	+	AluSx	SINE/Alu	1	291	(21)	19811
241	32.4	3.4	10.4	chr1	12450133	12450253	(236506169)	C	MIRb	SINE/MIR	(99)	169	57	19810
38	4.9	0.0	0.0	chr1	12510514	12510555	(236445867)	+	(TG)n	Simple_repeat	1	42	(0)	19882
3108	11.8	0.2	0.4	chr1	14777711	14778169	(234178253)	C	MER41B	LTR/ERV1	(155)	479	22	23836
1434	19.7	8.3	5.2	chr1	14778170	14778576	(234177846)	C	MER72	LTR/ERV1	(269)	402	1	23837
18	4.8	0.0	0.0	chr1	15154407	15154428	(233801994)	+	(GT)n	Simple_repeat	1	22	(0)	24656
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
886	30.0	8.4	5.5	chr1	16614267	16614887	(232341535)	+	L2b	LINE/L2	2508	3162	(213)	27821
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
1306	28.1	6.9	1.6	chr1	16634428	16634479	(232321943)	+	L1ME4b	LINE/L1	691	755	(137)	27862
2344	10.7	0.0	1.9	chr1	16634480	16634797	(232321625)	+	AluSx	SINE/Alu	1	312	(0)	27864
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
304	30.7	1.7	0.9	chr1	16904653	16904767	(232051655)	+	Charlie4a	DNA/hAT-Charlie	385	500	(8)	28227
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
4196	15.3	4.0	2.3	chr1	17360311	17360529	(231595893)	C	LTR62	LTR/ERVL	(487)	222	1	29249
2912	20.4	2.6	5.7	chr1	18421927	18422180	(230534242)	+	LTR49-int	LTR/ERV1	181	429	(7778)	31615
3179	14.4	6.5	12.3	chr1	18422181	18422855	(230533567)	+	MER41B	LTR/ERV1	2	634	(0)	31617
211	28.1	8.7	2.7	chr1	21632014	21632137	(227324285)	C	MIR3	SINE/MIR	(62)	146	10	38333
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
2017	9.4	0.0	0.4	chr1	21791927	21792182	(227164240)	+	AluY	SINE/Alu	1	255	(56)	38680
3255	15.4	3.0	4.9	chr1	21792183	21792255	(227164167)	C	MER41B	LTR/ERV1	(562)	72	1	38679
17	15.1	6.8	0.0	chr1	23168708	23168751	(225787671)	+	(CCG)n	Simple_repeat	1	47	(0)	41760
1949	15.2	0.0	1.1	chr1	25860581	25860863	(223095559)	C	AluSx	SINE/Alu	(32)	280	1	47964
15	19.1	0.0	6.4	chr1	26111803	26111849	(222844573)	+	(CGG)n	Simple_repeat	1	47	(0)	48599
15	20.0	2.5	0.0	chr1	26170107	26170146	(222786276)	+	(CGACCC)n	Simple_repeat	1	41	(0)	48734
234	35.3	9.9	3.8	chr1	26321367	26321631	(222634791)	+	L2c	LINE/L2	3063	3345	(42)	49060
12	22.7	0.0	0.0	chr1	27523698	27523729	(221432693)	+	(TGTC)n	Simple_repeat	1	32	(0)	51959
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
523	28.9	6.8	0.0	chr1	28511132	28511292	(220445130)	+	MIR	SINE/MIR	34	206	(56)	54385
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
183	21.1	7.8	7.8	chr1	28668526	28668602	(220287820)	+	MIR3	SINE/MIR	116	192	(16)	54843
19	8.9	2.6	2.6	chr1	28668793	28668830	(220287592)	+	(CGCC)n	Simple_repeat	1	39	(0)	54844
182	30.6	0.0	0.0	chr1	30756942	30756990	(218199432)	C	MIR3	SINE/MIR	(104)	104	56	58993
230	24.7	9.9	0.0	chr1	30761732	30761804	(218194618)	C	MIRc	SINE/MIR	(144)	124	44	59003
225	12.7	4.2	0.0	chr1	30768494	30768538	(218187884)	+	MIR3	SINE/MIR	102	149	(59)	59020
276	27.8	1.8	0.9	chr1	30769533	30769641	(218186781)	+	MER102c	DNA/hAT-Charlie	213	322	(9)	59022
611	23.0	6.3	5.8	chr1	30777041	30777229	(218179193)	C	MIR	SINE/MIR	(60)	208	19	59038
326	30.7	11.3	0.2	chr1	30777173	30777357	(218179065)	+	MIRb	SINE/MIR	20	233	(35)	59039
48	0.0	0.0	0.0	chr1	30858945	30858985	(218097437)	+	(CA)n	Simple_repeat	1	41	(0)	59245
315	30.9	5.3	1.6	chr1	30859109	30859236	(218097186)	C	L2b	LINE/L2	(5)	3370	3238	59246
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
2927	19.7	2.2	12.8	chr1	31171162	31171364	(217785058)	+	LTR8	LTR/ERV1	1	192	(499)	60029
1623	13.5	6.0	5.1	chr1	31945033	31945127	(217011295)	C	MER2	DNA/TcMar-Tigger	(5)	340	256	61670
2501	8.0	0.0	0.6	chr1	31956626	31956937	(216999485)	C	AluSq	SINE/Alu	(3)	310	1	61709
590	24.9	10.9	1.9	chr1	32178994	32179202	(216777220)	+	MIR	SINE/MIR	33	262	(0)	62268
372	30.9	4.6	1.8	chr1	32179169	32179330	(216777092)	C	MIR3	SINE/MIR	(85)	183	20	62269
373	21.3	18.6	0.8	chr1	34843950	34844096	(214112326)	C	MIRb	SINE/MIR	(40)	228	39	67526
3196	21.1	4.7	8.3	chr1	35278720	35280084	(213676338)	C	MLT1C-int	LTR/ERVL-MaLR	(103)	1386	44	68443
702	32.2	15.0	2.5	chr1	35568391	35568901	(213387521)	C	L2	LINE/L2	(562)	2857	2250	68993
188	33.3	4.9	0.0	chr1	35930475	35930552	(213025870)	C	L2	LINE/L2	(528)	2891	2810	69780
19	11.5	2.5	2.4	chr1	36157018	36157057	(212799365)	+	GA-rich	Low_complexity	1	41	(0)	70249
194	20.5	0.0	2.5	chr1	37999908	37999947	(210956475)	C	OldhAT1	DNA/hAT-Ac	(2351)	497	459	73887
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
1231	35.1	8.7	4.2	chr1	38587005	38587444	(210368978)	C	MamGyp-int	LTR/Gypsy	(1858)	3245	2789	74962
1022	29.1	8.5	1.3	chr1	38831915	38832297	(210124125)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	36	75408
336	25.6	11.9	1.5	chr1	39798966	39799100	(209157322)	+	MIRb	SINE/MIR	28	178	(90)	77427
681	32.5	1.5	0.5	chr1	40059793	40059984	(208896438)	C	MIR3	SINE/MIR	(12)	196	3	78038
271	25.6	9.1	0.0	chr1	42222371	42222460	(206733962)	C	MER94	DNA/hAT-Blackjack	(4)	130	32	82138
242	28.9	16.7	1.1	chr1	42222481	42222571	(206733851)	+	L2b	LINE/L2	3239	3346	(29)	82128
524	27.6	7.2	1.4	chr1	43043097	43043388	(205913034)	+	ERV3-16A3_I-int	LTR/ERVL	57	341	(4885)	83652
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
15	25.3	2.6	5.1	chr1	43707772	43707848	(205248574)	+	G-rich	Low_complexity	1	79	(0)	84748
1140	29.5	9.0	0.9	chr1	43834200	43834647	(205121775)	+	L2	LINE/L2	1713	2200	(1219)	85011
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
837	16.1	0.0	0.8	chr1	44722273	44722402	(204234020)	+	FLAM_C	SINE/Alu	3	131	(12)	86567
1707	7.8	4.3	13.2	chr1	44722422	44722754	(204233668)	+	AluSq2	SINE/Alu	3	304	(9)	86568
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
694	14.2	0.8	2.2	chr1	44739339	44739472	(204216950)	C	FLAM_C	SINE/Alu	(11)	132	1	86610
295	29.7	0.2	0.2	chr1	44739481	44739574	(204216848)	C	MIRb	SINE/MIR	(161)	107	8	86611
24	15.2	0.0	3.6	chr1	44775763	44775817	(204180605)	+	G-rich	Low_complexity	1	55	(0)	86689
581	20.9	3.5	0.0	chr1	44819555	44819664	(204136758)	C	AluSx3	SINE/Alu	(17)	294	181	86770
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
2514	6.2	0.3	0.3	chr1	45500583	45500887	(203455535)	+	AluSq2	SINE/Alu	1	305	(8)	88163
464	30.1	5.7	1.1	chr1	54464053	54464237	(194492185)	C	MIRb	SINE/MIR	(54)	214	21	105139
1202	23.4	8.9	5.1	chr1	55197108	55197462	(193758960)	+	L2a	LINE/L2	3057	3426	(0)	106608
550	19.6	7.4	2.6	chr1	58885055	58885169	(190071253)	+	MER3	DNA/hAT-Charlie	1	121	(88)	113735
261	27.2	5.6	1.1	chr1	58885172	58885304	(190071118)	C	MIR	SINE/MIR	(71)	159	12	113736
16	4.5	0.0	0.0	chr1	58896794	58896816	(190059606)	+	(GGGA)n	Simple_repeat	1	23	(0)	113763
1842	24.1	1.4	5.1	chr1	67060591	67061120	(181895302)	C	MER65B	LTR/ERV1	(21)	510	1	128164
1781	19.3	1.9	0.0	chr1	67061125	67061435	(181894987)	+	MLT1A0	LTR/ERVL-MaLR	48	364	(1)	128163
601	18.9	14.5	6.9	chr1	67923019	67923337	(181033085)	C	LTR54	LTR/ERV1	(112)	386	1	129820
14094	14.3	2.0	2.9	chr1	67923338	67925906	(181030516)	C	MER57A-int	LTR/ERV1	(392)	5795	3251	129818
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
404	28.7	1.3	1.9	chr1	84737686	84737845	(164218577)	+	L1ME3B	LINE/L1	6083	6241	(1)	152995
2658	11.1	2.7	0.0	chr1	86461466	86461862	(162494560)	C	MER61E	LTR/ERV1	(161)	408	1	155637
296	29.6	5.7	2.5	chr1	108691739	108691856	(140264566)	C	MIRb	SINE/MIR	(24)	244	123	187163
204	38.1	3.0	0.0	chr1	108746129	108746225	(140210197)	+	L2b	LINE/L2	3245	3344	(31)	187257
4051	10.7	0.2	0.0	chr1	110031079	110031631	(138924791)	C	MER41A	LTR/ERV1	(0)	554	1	189448
181	17.6	0.0	0.0	chr1	110031638	110031671	(138924751)	C	MIRc	SINE/MIR	(106)	162	129	189449
20240	15.9	2.9	0.6	chr1	110902717	110906134	(138050288)	+	L1M1	LINE/L1	16	3514	(4051)	190883
292	29.2	1.4	0.0	chr1	111755188	111755259	(137201163)	C	L2a	LINE/L2	(1018)	2401	2329	192020
2471	5.8	0.0	0.3	chr1	112462063	112462355	(136494067)	+	AluY	SINE/Alu	1	292	(19)	193153
1790	13.8	1.1	4.5	chr1	112808913	112809202	(136147220)	+	AluJr	SINE/Alu	5	284	(28)	193826
1656	15.2	8.1	0.7	chr1	114582047	114582322	(134374100)	C	AluJr	SINE/Alu	(10)	302	5	196898
14	5.0	0.0	0.0	chr1	114757666	114757686	(134198736)	+	(CAC)n	Simple_repeat	1	21	(0)	197230
4672	11.4	0.8	1.4	chr1	115874235	115874735	(133081687)	C	MER41B	LTR/ERV1	(130)	504	1	198829
1028	19.4	3.2	3.6	chr1	115874736	115874878	(133081544)	+	MER20	DNA/hAT-Charlie	76	219	(0)	198828
454	29.9	6.2	6.2	chr1	117363745	117364033	(131592389)	+	L2c	LINE/L2	3061	3349	(38)	201202
591	22.0	3.6	3.0	chr1	120354987	120355150	(128601272)	+	U1	snRNA	1	165	(0)	205414
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1188	16.7	3.4	15.8	chr1	145991760	145992094	(102964328)	+	AluJo	SINE/Alu	2	293	(19)	211891
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
425	20.4	15.0	5.2	chr1	147671802	147671885	(101284537)	+	MLT1B	LTR/ERVL-MaLR	1	107	(283)	214459
4104	12.2	2.0	2.2	chr1	147671886	147672520	(101283902)	+	MER41B	LTR/ERV1	1	634	(0)	214460
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
312	22.4	1.6	11.2	chr1	149637049	149637182	(99319240)	+	AluSz	SINE/Alu	2	122	(190)	217502
1677	11.7	2.0	4.5	chr1	150205969	150206288	(98750134)	+	LTR7B	LTR/ERV1	196	682	(25)	218518
2308	6.0	0.7	0.3	chr1	153727185	153727485	(95228937)	C	AluSq2	SINE/Alu	(11)	302	1	224668
443	26.6	4.0	9.7	chr1	154559240	154559476	(94396946)	+	MIRc	SINE/MIR	20	242	(26)	226416
456	11.5	3.3	4.4	chr1	155307213	155307272	(93649150)	+	MER51B	LTR/ERV1	318	377	(0)	227710
432	10.3	0.0	0.0	chr1	155307273	155307340	(93649082)	C	L1MB3	LINE/L1	(250)	5933	5866	227712
2126	11.9	4.9	0.3	chr1	155307341	155307693	(93648729)	+	MER41A	LTR/ERV1	1	370	(184)	227713
184	26.5	9.4	2.5	chr1	156755592	156755689	(92200733)	+	MIR3	SINE/MIR	54	158	(110)	230683
456	30.0	13.0	3.9	chr1	156755796	156755967	(92200455)	+	MIR	SINE/MIR	10	206	(56)	230684
2413	8.1	1.0	0.7	chr1	157037749	157038058	(91918364)	+	AluSx1	SINE/Alu	1	311	(1)	231165
1594	14.5	3.4	10.8	chr1	160985674	160986052	(87970370)	C	LTR7B	LTR/ERV1	(0)	464	115	236629
2949	7.4	1.5	11.4	chr1	163233522	163234037	(85722385)	C	LTR7B	LTR/ERV1	(0)	464	1	240452
2182	11.4	0.0	0.7	chr1	167824039	167824335	(81132087)	+	AluSz	SINE/Alu	1	295	(17)	247374
1148	13.7	0.0	0.0	chr1	168225441	168225608	(80730814)	C	AluJo	SINE/Alu	(11)	301	134	248046
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
13963	13.3	3.4	4.4	chr1	172924294	172926737	(76029685)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1	254881
266	31.6	6.3	5.3	chr1	173302216	173302402	(75654020)	C	MIRc	SINE/MIR	(18)	250	62	255407
373	30.4	2.3	4.7	chr1	173302478	173302633	(75653789)	C	MIRb	SINE/MIR	(44)	164	17	255408
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
2252	11.2	1.7	0.3	chr1	173862266	173862550	(75093872)	C	AluSg	SINE/Alu	(21)	289	1	256233
1408	23.7	13.9	14.3	chr1	179068734	179069360	(69887062)	C	LTR41B	LTR/ERVL	(62)	696	62	264088
3934	7.6	5.0	0.2	chr1	179363083	179363609	(69592813)	C	MER41A	LTR/ERV1	(0)	554	1	264713
259	30.1	8.9	4.3	chr1	181033063	181033270	(67923152)	C	MIRc	SINE/MIR	(48)	220	3	267338
3896	12.8	4.1	0.7	chr1	181173937	181174423	(67781999)	+	MER41B	LTR/ERV1	1	509	(125)	267598
210	36.1	1.4	0.0	chr1	182380737	182380808	(66575614)	C	L2a	LINE/L2	(43)	3383	3311	269383
1968	10.9	0.7	6.1	chr1	182380968	182381279	(66575143)	+	AluSz	SINE/Alu	1	295	(17)	269384
765	29.2	11.1	4.8	chr1	182600698	182601435	(66354987)	+	L2a	LINE/L2	2599	3418	(8)	269728
310	30.6	0.0	1.2	chr1	182838895	182838980	(66117442)	C	MIRb	SINE/MIR	(19)	249	165	270132
703	22.6	2.2	4.3	chr1	184031622	184031806	(64924616)	+	MIR	SINE/MIR	44	224	(38)	271985
54	0.0	0.0	0.0	chr1	184031818	184031866	(64924556)	+	(TCCT)n	Simple_repeat	1	49	(0)	271986
1847	18.8	1.0	0.0	chr1	184031894	184032191	(64924231)	C	AluJb	SINE/Alu	(9)	303	3	271987
2119	13.0	11.9	0.5	chr1	185539521	185539899	(63416523)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	274408
34	0.0	0.0	2.9	chr1	186375989	186376022	(62580400)	+	(GT)n	Simple_repeat	1	34	(0)	275491
1343	28.1	4.1	5.6	chr1	191889405	191890046	(57066376)	C	L1MEf	LINE/L1	(4737)	1463	832	282706
1447	23.5	8.8	9.3	chr1	198079256	198079956	(50876466)	C	MER61E	LTR/ERV1	(0)	779	14	290741
688	23.1	0.0	0.8	chr1	200154573	200154702	(48801720)	+	FLAM_A	SINE/Alu	1	129	(13)	293714
53	52.2	0.0	0.0	chr1	200816967	200817281	(48139141)	+	(TA)n	Simple_repeat	1	315	(0)	295058
1522	15.8	3.3	2.0	chr1	203001946	203002243	(45954179)	C	LTR7B	LTR/ERV1	(0)	464	163	298899
346	21.5	8.9	4.0	chr1	203002215	203002364	(45954058)	C	LTR7B	LTR/ERV1	(179)	285	128	298899
2319	18.6	5.6	4.2	chr1	203599930	203600455	(45355967)	C	MER41A	LTR/ERV1	(20)	534	1	299917
2940	17.9	3.9	0.6	chr1	204172039	204172561	(44783861)	+	MER87	LTR/ERV1	1	541	(0)	301120
12	7.2	10.3	0.0	chr1	204466140	204466168	(44490254)	+	G-rich	Low_complexity	1	32	(0)	301575
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
12	20.4	0.0	0.0	chr1	204672677	204672705	(44283717)	+	(CTCC)n	Simple_repeat	1	29	(0)	302048
366	39.0	1.5	1.0	chr1	206941407	206941608	(42014814)	C	MIRc	SINE/MIR	(19)	249	47	305955
280	16.7	0.0	0.0	chr1	207312022	207312069	(41644353)	+	LTR8	LTR/ERV1	1	48	(772)	306468
2885	21.2	2.8	4.9	chr1	207312071	207312761	(41643661)	+	LTR8	LTR/ERV1	16	691	(0)	306468
14	24.5	4.6	1.5	chr1	207626741	207626755	(41329667)	+	(AATAA)n	Simple_repeat	1	16	(0)	306929
2325	12.9	0.0	0.0	chr1	207626756	207627057	(41329365)	+	AluSq	SINE/Alu	1	302	(11)	306930
341	34.8	3.5	3.6	chr1	209646353	209646540	(39309882)	C	MIR3	SINE/MIR	(20)	188	3	309984
2874	7.7	0.8	0.0	chr1	210557493	210557844	(38398578)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	311353
37	6.6	0.0	0.0	chr1	211607238	211607285	(37349137)	+	(GA)n	Simple_repeat	1	48	(0)	313030
1793	17.5	11.1	3.1	chr1	212478011	212478420	(36478002)	C	LTR54B	LTR/ERV1	(44)	454	2	314582
407	27.8	3.1	2.3	chr1	212478475	212478603	(36477819)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	433	314585
296	31.6	1.0	1.0	chr1	221039755	221039850	(27916572)	+	MamSINE1	SINE/tRNA-RTE	117	212	(78)	327073
2406	18.4	4.9	6.0	chr1	221962160	221962675	(26993747)	C	LTR54	LTR/ERV1	(0)	510	1	328437
384	30.1	7.0	1.8	chr1	223700748	223700929	(25255493)	C	L2b	LINE/L2	(5)	3382	3200	331057
3965	7.5	1.1	3.5	chr1	223732186	223732753	(25223669)	C	MER41A	LTR/ERV1	(0)	554	1	331128
2722	16.7	2.9	5.4	chr1	223732754	223733021	(25223401)	C	LTR75_1	LTR/ERV1	(264)	282	4	331127
1733	16.5	3.0	1.5	chr1	224885458	224885790	(24070632)	+	LTR7B	LTR/ERV1	127	464	(0)	333319
4438	6.0	1.1	2.5	chr1	225466588	225467028	(23489394)	C	MER41A	LTR/ERV1	(116)	438	1	334015
22	22.6	2.4	4.7	chr1	228082878	228082977	(20873445)	+	G-rich	Low_complexity	1	97	(0)	338274
1526	15.2	5.0	0.4	chr1	228139511	228139774	(20816648)	C	AluJr	SINE/Alu	(35)	277	1	338351
182	36.8	9.0	1.3	chr1	229508750	229509126	(19447296)	+	L2c	LINE/L2	2326	2734	(685)	340395
4518	7.1	0.7	0.0	chr1	230151683	230152232	(18804190)	C	MER41A	LTR/ERV1	(0)	554	1	341476
7640	13.2	1.8	2.1	chr1	231049496	231049968	(17906454)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	768	342827
1350	17.2	7.0	4.8	chr1	231099234	231099615	(17856807)	C	LTR7B	LTR/ERV1	(2)	470	158	342917
21	16.6	0.0	0.0	chr1	232805548	232805588	(16150834)	+	GA-rich	Low_complexity	1	41	(0)	345472
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
222	28.3	11.7	7.0	chr1	234874713	234874826	(14081596)	C	L3	LINE/CR1	(12)	4087	3968	348584
504	30.1	13.3	2.7	chr1	234875130	234875505	(14080917)	+	L1MC5a	LINE/L1	2352	2773	(4)	348585
12	15.1	0.0	9.1	chr1	234961910	234961953	(13994469)	+	(GCACAGT)n	Simple_repeat	1	44	(0)	348741
16	19.4	0.0	5.0	chr1	234962043	234962082	(13994340)	+	(CA)n	Simple_repeat	1	40	(0)	348742
14	12.2	8.2	3.8	chr1	235588828	235588876	(13367546)	+	(CCACT)n	Simple_repeat	1	53	(0)	350049
2680	14.5	11.3	3.9	chr1	235589033	235589593	(13366829)	+	LTR18B	LTR/ERVL	1	608	(6)	350050
2326	7.6	2.7	0.0	chr1	236351438	236351727	(12604695)	+	AluSc	SINE/Alu	1	298	(11)	351445
4051	11.5	0.8	2.0	chr1	236351728	236352219	(12604203)	C	MER41E	LTR/ERV1	(99)	496	1	351444
11793	14.8	7.4	5.3	chr1	244393580	244394239	(4562183)	C	ERVL-int	LTR/ERVL	(1829)	3928	3285	364132
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
1827	15.7	1.5	0.8	chr1	245051121	245051387	(3905035)	+	AluJo	SINE/Alu	14	282	(30)	365375
13	15.1	2.3	6.8	chr1	245051483	245051525	(3904897)	+	G-rich	Low_complexity	1	44	(0)	365376
2054	17.6	18.7	3.7	chr1	246110332	246110849	(2845573)	C	LTR18B	LTR/ERVL	(0)	614	1	366955
2658	10.2	0.4	13.3	chr1	246418826	246419358	(2537064)	+	LTR7B	LTR/ERV1	1	464	(0)	367425
2194	19.4	6.4	13.9	chr1	247367537	247367831	(1588591)	C	LTR49-int	LTR/ERV1	(5852)	479	204	369022
1608	16.7	1.9	2.2	chr1	247367833	247367906	(1588516)	+	AluJb	SINE/Alu	1	74	(238)	369034
4117	13.4	1.1	1.3	chr1	247367907	247368541	(1587881)	+	MER41B	LTR/ERV1	1	634	(0)	369035
2544	20.9	6.5	4.8	chr1	247374735	247374850	(1581572)	+	LTR8A	LTR/ERV1	1	124	(603)	369051
4700	11.6	2.3	2.2	chr1	247374851	247375540	(1580882)	+	LTR8	LTR/ERV1	1	691	(0)	369052
2542	20.6	9.4	2.2	chr1	248444493	248445214	(511208)	+	MER4CL34	LTR/ERV1	4	760	(5)	370413
224	31.8	8.6	0.0	chr1	248828933	248829039	(127383)	+	L2	LINE/L2	1910	2026	(1393)	370862
248	38.7	0.0	0.0	chr1	248829138	248829243	(127179)	C	L2c	LINE/L2	(0)	3387	3282	370863
2207	12.8	0.3	0.6	chr1	248829277	248829588	(126834)	C	AluSz	SINE/Alu	(1)	311	1	370864
15	21.2	0.0	4.3	chr10	1048784	1048830	(132748592)	+	(GCCCC)n	Simple_repeat	1	47	(0)	372218
241	22.8	0.0	3.4	chr10	3890734	3890792	(129906630)	+	MER102b	DNA/hAT-Charlie	283	339	(2)	375714
4359	11.5	1.4	0.6	chr10	3890830	3891458	(129905964)	+	MER41B	LTR/ERV1	1	634	(0)	375715
3434	15.2	1.2	0.5	chr10	9825470	9826030	(123971392)	+	MER61E	LTR/ERV1	1	565	(4)	384785
671	28.7	1.9	1.4	chr10	11167758	11167969	(122629453)	C	MIRb	SINE/MIR	(16)	252	40	386570
467	31.7	4.3	1.9	chr10	15440719	15440924	(118356498)	+	MIR	SINE/MIR	52	262	(0)	394268
4791	14.9	5.1	1.5	chr10	15455070	15455936	(118341486)	+	MER4D1	LTR/ERV1	1	900	(0)	394296
4147	10.3	1.9	4.6	chr10	15627751	15628324	(118169098)	+	MER41B	LTR/ERV1	1	570	(64)	394578
472	25.5	10.1	2.4	chr10	16891767	16891931	(116905491)	+	MER20	DNA/hAT-Charlie	1	179	(40)	396533
2034	15.7	7.9	0.8	chr10	17473644	17473996	(116323426)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	397449
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
2155	11.8	0.0	0.7	chr10	28811491	28811787	(104985635)	C	AluSx1	SINE/Alu	(17)	295	1	415793
4301	12.5	1.7	0.2	chr10	28811807	28812430	(104984992)	+	MER41B	LTR/ERV1	1	634	(0)	415794
272	31.9	1.1	0.0	chr10	35391651	35391741	(98405681)	+	MIRb	SINE/MIR	127	218	(50)	426535
13	28.7	6.9	1.1	chr10	35391790	35391876	(98405546)	+	(TTCCTC)n	Simple_repeat	1	93	(0)	426536
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
1853	12.8	1.4	3.6	chr10	43418428	43418731	(90378691)	+	AluSz	SINE/Alu	8	304	(8)	433461
4627	10.8	1.1	0.2	chr10	45410801	45411428	(88385994)	C	MER41B	LTR/ERV1	(0)	634	1	436025
456	19.5	3.7	3.3	chr10	46525398	46526683	(87270739)	+	(CA)n	Simple_repeat	1	1334	(0)	437801
198	10.7	17.6	5.1	chr10	50622133	50622191	(83175231)	C	AmnSINE1	SINE/5S-Deu-L2	(419)	156	89	443659
246	31.1	4.2	0.0	chr10	58384868	58384957	(75412465)	C	MER5A	DNA/hAT-Charlie	(36)	153	60	454064
554	23.0	12.7	2.9	chr10	62632079	62632248	(71165174)	C	MIRb	SINE/MIR	(70)	198	10	460376
2231	11.6	0.0	0.0	chr10	68563683	68563976	(65233446)	C	AluSx	SINE/Alu	(13)	299	6	469551
12	0.0	4.3	4.2	chr10	69123850	69123872	(64673550)	+	(TCCT)n	Simple_repeat	1	24	(0)	470925
2666	13.0	0.2	0.2	chr10	69410648	69411056	(64386366)	+	LTR47B2	LTR/ERVL	1	409	(25)	471539
4718	9.7	1.9	0.0	chr10	70590200	70590821	(63206601)	C	MER41B	LTR/ERV1	(0)	634	1	473772
449	30.8	4.3	6.2	chr10	70661665	70661969	(63135453)	+	L2b	LINE/L2	3048	3346	(29)	473900
823	23.9	4.1	0.0	chr10	70662462	70662670	(63134752)	C	MER58A	DNA/hAT-Charlie	(1)	223	6	473902
871	22.9	5.1	13.6	chr10	70662677	70662761	(63134661)	+	L1MC5a	LINE/L1	2336	2417	(360)	473901
2054	13.5	0.3	0.0	chr10	70662762	70663049	(63134373)	C	AluSx1	SINE/Alu	(23)	289	1	473903
21	19.6	0.0	2.3	chr10	71727653	71727696	(62069726)	+	(CA)n	Simple_repeat	1	44	(0)	475798
239	20.9	10.3	4.4	chr10	71727717	71727850	(62069572)	C	MIR	SINE/MIR	(106)	156	12	475799
13	8.8	7.5	4.7	chr10	71748723	71748762	(62048660)	+	(GCACCCCA)n	Simple_repeat	1	43	(0)	475836
404	26.1	6.9	0.0	chr10	71860652	71860785	(61936637)	C	Charlie4z	DNA/hAT-Charlie	(19)	148	5	476035
648	15.7	1.9	1.9	chr10	72276704	72276811	(61520611)	+	FLAM_A	SINE/Alu	21	128	(14)	476924
955	9.1	0.8	0.0	chr10	72297088	72297219	(61500203)	C	FLAM_C	SINE/Alu	(10)	133	1	476988
431	17.2	3.9	2.9	chr10	72320176	72320277	(61477145)	+	MIRb	SINE/MIR	97	199	(69)	477043
234	34.8	4.2	1.9	chr10	72321118	72321278	(61476144)	+	MIRb	SINE/MIR	36	200	(68)	477046
765	26.1	5.8	2.6	chr10	73097406	73097637	(60699785)	+	MIRb	SINE/MIR	19	258	(10)	478602
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
3521	17.0	2.8	7.0	chr10	73742860	73743582	(60053840)	C	LTR8	LTR/ERV1	(0)	691	1	479874
273	25.6	3.5	4.7	chr10	73743583	73743617	(60053805)	+	L2a	LINE/L2	3392	3426	(0)	479873
182	30.9	0.0	0.0	chr10	73802253	73802307	(59995115)	C	Penelope1_Vert	LINE/Penelope	(813)	274	220	479957
2455	6.4	0.3	0.0	chr10	73816463	73816757	(59980665)	C	AluY	SINE/Alu	(14)	297	2	479975
1619	15.1	5.8	1.4	chr10	75209596	75209712	(58587710)	C	AluJb	SINE/Alu	(178)	134	1	482669
1953	16.7	15.5	2.5	chr10	75209713	75209895	(58587527)	C	LTR54	LTR/ERV1	(331)	179	1	482668
12	19.6	0.0	0.0	chr10	78973519	78973547	(54823875)	+	(CAGCC)n	Simple_repeat	1	29	(0)	488802
3465	9.7	2.7	0.8	chr10	84118548	84119048	(49678374)	C	LTR10F	LTR/ERV1	(0)	511	1	496356
1988	11.8	0.0	0.0	chr10	84525091	84525370	(49272052)	+	MER61E	LTR/ERV1	1	280	(289)	496993
6224	6.8	3.2	0.5	chr10	84525371	84526129	(49271293)	C	LTR17	LTR/ERV1	(0)	780	1	496994
1442	15.2	3.7	4.8	chr10	91344526	91344877	(42452545)	+	LTR7B	LTR/ERV1	117	464	(0)	507182
2758	7.4	1.3	16.9	chr10	97562298	97562848	(36234574)	C	LTR7B	LTR/ERV1	(0)	464	1	518219
3201	7.4	0.4	11.4	chr10	101183756	101184274	(32613148)	C	LTR7B	LTR/ERV1	(2)	462	1	524619
7601	7.5	0.9	0.2	chr10	102454375	102455335	(31342087)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	526959
1092	13.5	2.9	4.5	chr10	102455336	102455452	(31341970)	C	AluJb	SINE/Alu	(66)	246	134	526958
897	14.5	0.0	0.0	chr10	102455453	102455576	(31341846)	C	AluJo	SINE/Alu	(188)	124	1	526960
1105	17.6	0.0	0.0	chr10	123916777	123916941	(9880481)	C	AluJo	SINE/Alu	(11)	301	137	561095
12	35.3	2.3	2.3	chr10	123916974	123917059	(9880363)	+	GA-rich	Low_complexity	1	88	(0)	561096
496	20.9	0.7	7.6	chr10	123942005	123942149	(9855273)	+	LTR37A	LTR/ERV1	50	184	(242)	561136
3726	13.6	2.1	2.1	chr10	123942233	123942855	(9854567)	+	MER41B	LTR/ERV1	1	623	(11)	561137
497	21.6	7.3	0.7	chr10	125549701	125549840	(8247582)	C	MLT1H2	LTR/ERVL-MaLR	(283)	206	57	563685
4069	8.4	1.4	2.1	chr11	352134	352592	(134734030)	C	MER41A	LTR/ERV1	(99)	455	1	573310
2468	9.4	6.4	0.0	chr11	352761	353111	(134733511)	+	MER51B	LTR/ERV1	1	375	(2)	573314
255	28.7	6.3	1.4	chr11	355690	355901	(134730721)	C	LTR40b	LTR/ERVL	(37)	425	203	573320
14	12.8	1.9	9.4	chr11	1763729	1763780	(133322842)	+	(GGCCCC)n	Simple_repeat	1	53	(0)	575049
4517	4.9	1.1	0.0	chr11	3509348	3509899	(131576723)	C	LTR6B	LTR/ERV1	(0)	558	1	577132
2298	11.1	0.0	0.3	chr11	3509900	3510216	(131576406)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	577133
1320	24.1	7.5	1.9	chr11	13303508	13303883	(121782739)	C	MLT1J2	LTR/ERVL-MaLR	(28)	420	22	592173
1059	26.4	6.6	2.5	chr11	13303917	13304405	(121782217)	C	L2a	LINE/L2	(283)	3104	2545	592172
2317	28.4	7.7	7.2	chr11	43952820	43953061	(91133561)	+	MLT1J2-int	LTR/ERVL-MaLR	920	1141	(246)	639257
4178	11.0	3.5	1.6	chr11	43953062	43953233	(91133389)	+	MER41B	LTR/ERV1	1	169	(465)	639261
2389	13.7	4.7	4.7	chr11	44763849	44764276	(90322346)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	640801
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
2260	24.4	3.5	5.1	chr11	58770604	58771487	(76315135)	+	HERV1_I-int	LTR/ERV1	1	1021	(7780)	655962
296	32.0	13.9	2.7	chr11	59545915	59546086	(75540536)	C	L2	LINE/L2	(768)	2651	2455	656932
1055	19.3	4.0	8.7	chr11	59546097	59546385	(75540237)	+	MLT1C	LTR/ERVL-MaLR	2	276	(191)	656934
314	39.9	5.5	0.8	chr11	59857447	59857686	(75228936)	+	L2c	LINE/L2	2910	3161	(226)	657572
228	36.2	6.0	2.1	chr11	59857775	59857918	(75228704)	+	MIR	SINE/MIR	1	150	(112)	657573
2449	22.1	1.6	0.2	chr11	59960504	59961014	(75125608)	+	LTR53	LTR/ERVL	1	518	(1)	657716
13	21.9	2.3	2.2	chr11	60906383	60906426	(74180196)	+	(GGCGCCG)n	Simple_repeat	1	45	(0)	659081
2267	10.2	0.3	0.3	chr11	62041758	62042052	(73044570)	C	AluSx1	SINE/Alu	(17)	295	1	661345
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
625	29.9	13.6	2.1	chr11	62889212	62889536	(72197086)	C	L2a	LINE/L2	(2)	3424	3057	663048
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
8930	1.6	0.0	0.0	chr11	63530314	63531281	(71555341)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	663822
1967	17.5	9.9	5.2	chr11	63531292	63531754	(71554868)	C	MER66C	LTR/ERV1	(67)	488	2	663823
288	22.7	12.9	1.1	chr11	64181950	64182038	(70904584)	+	Arthur1A	DNA/hAT-Tip100	62	162	(15)	665131
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
1577	16.0	6.9	1.4	chr11	65225087	65225361	(69861261)	+	AluJo	SINE/Alu	11	301	(11)	667095
238	19.4	7.5	0.0	chr11	65428532	65428593	(69658029)	+	MamRep4096	DNA/hAT-Tip100	68	134	(292)	667514
272	19.1	0.0	12.5	chr11	65430445	65430516	(69656106)	+	Charlie4z	DNA/hAT-Charlie	4	66	(101)	667518
332	37.1	15.1	1.5	chr11	65430561	65430886	(69655736)	C	L1M5	LINE/L1	(293)	5831	5454	667519
332	31.3	6.2	8.0	chr11	65499662	65499925	(69586697)	+	L1M4c	LINE/L1	949	1207	(5177)	667663
13	8.5	4.0	0.0	chr11	65500555	65500579	(69586043)	+	(GAAG)n	Simple_repeat	1	26	(0)	667664
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
353	21.1	2.6	1.3	chr11	66958999	66959075	(68127547)	+	MIRb	SINE/MIR	88	165	(103)	670575
3830	14.4	6.6	3.4	chr11	66959149	66959823	(68126799)	C	LTR34	LTR/ERV1	(0)	699	2	670576
212	24.9	0.0	0.0	chr11	67464155	67464220	(67622402)	+	MIR3	SINE/MIR	42	107	(123)	671687
352	22.7	5.8	1.0	chr11	67469596	67469693	(67616929)	C	MIRb	SINE/MIR	(83)	185	83	671696
181	34.2	1.4	0.0	chr11	69401045	69401117	(65685505)	+	MIRb	SINE/MIR	167	240	(28)	675032
2242	12.0	0.0	0.3	chr11	71712560	71712876	(63373746)	+	HERVS71-int	LTR/ERV1	8594	8909	(69)	678661
4505	4.9	1.4	0.0	chr11	71712877	71713426	(63373196)	+	LTR6B	LTR/ERV1	1	558	(0)	678662
919	10.9	0.0	0.0	chr11	77053445	77053572	(58033050)	+	MER41B	LTR/ERV1	1	128	(506)	689174
2920	11.8	1.6	0.7	chr11	77053578	77054012	(58032610)	C	MER83	LTR/ERV1	(9)	439	1	689175
668	26.2	19.1	2.7	chr11	85951041	85951598	(49135024)	+	L2a	LINE/L2	2760	3425	(1)	704672
1417	27.3	7.4	0.9	chr11	86183546	86184000	(48902622)	C	LTR16C	LTR/ERVL	(0)	489	3	705101
4277	5.8	3.2	0.0	chr11	86937365	86937900	(48148722)	+	MER41A	LTR/ERV1	1	554	(0)	706350
924	26.6	13.0	3.2	chr11	96330521	96330989	(38755633)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	3	719993
1448	22.4	11.1	6.1	chr11	97963447	97964133	(37122489)	C	MER61E	LTR/ERV1	(2)	777	1	721865
1432	23.5	7.1	7.4	chr11	97973243	97973850	(37112772)	C	MER61E	LTR/ERV1	(29)	616	7	721869
3073	16.3	3.5	8.5	chr11	110075306	110076034	(25010588)	C	LTR8	LTR/ERV1	(0)	691	1	739233
12	21.8	2.7	0.0	chr11	119317618	119317654	(15768968)	+	(CCACTG)n	Simple_repeat	1	38	(0)	754672
5891	21.4	5.7	7.1	chr11	124607976	124609558	(10477064)	+	L1ME3A	LINE/L1	4483	6059	(114)	763301
1941	13.2	0.0	0.0	chr11	125568869	125569134	(9517488)	C	AluSg	SINE/Alu	(26)	284	19	764749
11	30.3	2.0	0.0	chr12	8697399	8697447	(124577862)	+	(CGGCCGG)n	Simple_repeat	1	50	(0)	792745
2065	26.5	4.4	1.8	chr12	9890217	9890878	(123384431)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	1	794448
283	24.7	2.0	2.5	chr12	14236679	14236782	(119038527)	+	LTR7Y	LTR/ERV1	158	283	(189)	801001
1569	14.3	3.0	3.3	chr12	14236785	14237087	(119038222)	+	LTR7B	LTR/ERV1	163	464	(0)	801002
11291	19.6	3.4	1.3	chr12	19571074	19574397	(113700912)	C	L1PREC2	LINE/L1	(3307)	4834	1127	808439
2800	7.7	1.9	17.0	chr12	24907396	24907943	(108367366)	+	LTR7B	LTR/ERV1	1	464	(0)	815615
183	28.2	4.9	8.2	chr12	31618117	31618201	(101657108)	+	MIR	SINE/MIR	169	250	(12)	825637
1905	18.6	6.1	9.8	chr12	31618246	31618390	(101656919)	+	LTR54	LTR/ERV1	1	147	(363)	825642
3758	13.3	2.7	0.0	chr12	31618391	31618969	(101656340)	C	MER41E	LTR/ERV1	(0)	595	1	825643
3942	11.7	3.2	2.0	chr12	31832619	31833230	(101442079)	C	LTR77	LTR/ERV1	(2)	620	1	826161
4308	12.8	0.3	0.5	chr12	32021013	32021530	(101253779)	C	MER41B	LTR/ERV1	(117)	517	2	826606
2657	17.6	4.7	11.4	chr12	32021531	32021598	(101253711)	C	MER67C	LTR/ERV1	(328)	383	363	826605
1217	27.9	10.9	2.7	chr12	32047770	32048362	(101226947)	+	Charlie7	DNA/hAT-Charlie	8	655	(1957)	826684
4108	9.0	6.9	2.6	chr12	32946664	32947269	(100328040)	+	MER41B	LTR/ERV1	1	634	(0)	828412
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
313	25.8	3.8	9.2	chr12	46357773	46357913	(86917396)	+	MER5A	DNA/hAT-Charlie	35	167	(22)	842149
220	32.6	9.4	2.9	chr12	47812744	47812882	(85462427)	C	MIRb	SINE/MIR	(116)	152	4	844235
41	0.0	0.0	0.0	chr12	51246605	51246639	(82028670)	+	(TG)n	Simple_repeat	1	35	(0)	850926
20	17.8	5.9	5.6	chr12	53047081	53047165	(80228144)	+	GA-rich	Low_complexity	1	90	(0)	853986
355	35.2	9.3	0.8	chr12	53727786	53728020	(79547289)	C	MIRc	SINE/MIR	(8)	260	4	855348
893	16.4	1.9	0.6	chr12	68351935	68352093	(64923216)	+	MLT1A0	LTR/ERVL-MaLR	1	161	(204)	877220
670	14.3	1.9	0.9	chr12	68352094	68352199	(64923110)	+	MER41-int	LTR/ERV1	5840	5946	(0)	877221
3886	10.1	2.7	1.1	chr12	68352200	68352738	(64922571)	+	MER41B	LTR/ERV1	1	548	(86)	877221
13	16.9	3.0	0.0	chr12	68591767	68591799	(64683510)	+	(TAGA)n	Simple_repeat	1	34	(0)	877670
3977	12.0	1.1	0.0	chr12	70090836	70091394	(63183915)	C	MER61E	LTR/ERV1	(4)	565	1	880366
426	31.3	10.7	2.5	chr12	75683824	75684062	(57591247)	C	MIR	SINE/MIR	(0)	262	2	887914
4424	6.7	0.0	0.0	chr12	75684079	75684632	(57590677)	+	MER41A	LTR/ERV1	1	554	(0)	887915
562	31.6	9.8	2.5	chr12	93443032	93443313	(39831996)	C	L2c	LINE/L2	(61)	3326	3022	913436
13	0.0	0.0	0.0	chr12	94459808	94459824	(38815485)	+	(GGC)n	Simple_repeat	1	17	(0)	915224
4510	12.2	0.2	0.2	chr12	96083136	96083769	(37191540)	+	MER41B	LTR/ERV1	1	634	(0)	918401
4232	6.0	4.3	0.0	chr12	110271335	110271864	(23003445)	C	MER41A	LTR/ERV1	(0)	554	1	944394
255	29.8	0.0	0.0	chr12	110271866	110271922	(23003387)	C	L2a	LINE/L2	(95)	3331	3275	944395
1651	22.9	5.0	3.8	chr12	113758555	113759053	(19516256)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	952426
4212	6.0	4.2	0.0	chr12	116556050	116556580	(16718729)	C	MER41A	LTR/ERV1	(0)	554	1	958367
16	23.9	2.9	4.2	chr12	122078733	122078801	(11196508)	+	(CGCCG)n	Simple_repeat	1	71	(0)	971060
20	25.1	2.3	4.5	chr12	122078969	122079055	(11196254)	+	(CCGCG)n	Simple_repeat	1	89	(0)	971061
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
12	14.1	10.0	4.5	chr12	124863641	124863700	(8411609)	+	(ACAGCGC)n	Simple_repeat	1	66	(0)	976996
193	24.5	11.7	0.0	chr12	124910736	124910788	(8364521)	C	L3	LINE/CR1	(198)	3901	3842	977135
4014	10.0	0.5	0.0	chr12	126903073	126903623	(6371686)	C	MER41A	LTR/ERV1	(0)	554	1	980589
3989	13.4	2.0	0.2	chr12	126907913	126908534	(6366775)	C	MER41B	LTR/ERV1	(0)	634	1	980595
4197	13.9	2.4	1.9	chr12	131362184	131362814	(1912495)	C	MER41B	LTR/ERV1	(0)	634	1	988030
2023	29.7	4.3	5.0	chr12	131362815	131362842	(1912467)	+	L1MC5a	LINE/L1	2448	2472	(305)	988027
2089	15.9	3.3	0.3	chr12	131362843	131363196	(1912113)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	988031
2699	3.3	0.0	0.3	chr12	132956929	132957233	(318076)	C	AluY	SINE/Alu	(7)	304	1	990232
1430	16.8	4.7	5.6	chr12	132957234	132957399	(317910)	C	LTR7B	LTR/ERV1	(166)	298	127	990231
1718	16.7	0.9	0.6	chr13	27138393	27138711	(87225617)	C	LTR47A2	LTR/ERVL	(112)	320	1	1004378
234	26.8	2.3	4.4	chr13	27138748	27138837	(87225491)	C	X7A_LINE	LINE/CR1	(164)	103	16	1004380
3862	14.8	4.1	0.2	chr13	35745447	35746055	(78618273)	C	MER41B	LTR/ERV1	(0)	634	1	1017597
1997	18.9	1.8	3.2	chr13	35746056	35746215	(78618113)	C	L1MB7	LINE/L1	(302)	5882	5728	1017596
2078	22.8	5.6	7.6	chr13	64274384	64275072	(50089256)	+	MER61E	LTR/ERV1	1	776	(3)	1058319
367	28.1	11.0	2.0	chr13	89875173	89875321	(24489007)	C	MIRb	SINE/MIR	(0)	268	105	1092213
560	28.4	5.3	6.4	chr13	90724595	90724955	(23639373)	C	L1ME3A	LINE/L1	(0)	6173	5817	1093292
1331	23.5	11.3	2.8	chr13	90724956	90725510	(23638818)	C	L1ME3A	LINE/L1	(759)	5483	4882	1093292
382	28.1	8.1	2.2	chr13	92514458	92514686	(21849642)	C	MIR	SINE/MIR	(6)	262	3	1095674
1400	27.1	6.2	1.4	chr13	92559394	92559834	(21804494)	+	MER74B	LTR/ERVL	74	537	(85)	1095728
228	26.6	3.5	6.8	chr13	92591183	92591299	(21773029)	C	LTR81C	LTR/Gypsy	(186)	967	855	1095769
4278	8.3	0.0	0.7	chr14	31242186	31242743	(75800975)	C	MER41A	LTR/ERV1	(0)	554	1	1143240
4121	13.4	4.6	3.2	chr14	31242744	31242857	(75800861)	C	MER72	LTR/ERV1	(605)	117	1	1143239
628	23.4	2.4	5.8	chr14	37167293	37167365	(69876353)	C	MER5A1	DNA/hAT-Charlie	(0)	166	93	1152586
4559	11.1	3.9	5.1	chr14	37167366	37168065	(69875653)	+	LTR8	LTR/ERV1	1	691	(0)	1152587
2488	6.9	0.7	26.9	chr14	44450078	44450708	(62593010)	C	LTR7B	LTR/ERV1	(0)	464	1	1161775
2539	9.8	10.3	3.3	chr14	53128745	53129174	(53914544)	+	LTR7B	LTR/ERV1	1	464	(0)	1174087
4404	11.3	1.9	0.2	chr14	64363425	64364047	(42679671)	+	MER41B	LTR/ERV1	1	634	(0)	1191135
318	25.3	13.2	0.6	chr14	91267849	91268007	(15775711)	C	L2c	LINE/L2	(936)	2483	2302	1235428
2102	10.0	0.7	0.0	chr14	91268100	91268400	(15775318)	+	LTR62	LTR/ERVL	2	304	(405)	1235437
283	22.9	11.6	3.6	chr14	93272828	93272999	(13770719)	+	LTR16E2	LTR/ERVL	326	549	(19)	1239202
34	0.0	0.0	0.0	chr14	100771666	100771694	(6272024)	+	(TG)n	Simple_repeat	1	29	(0)	1252384
849	15.4	1.5	0.0	chr14	100771819	100771948	(6271770)	+	FLAM_A	SINE/Alu	1	132	(10)	1252385
2595	8.9	0.0	3.0	chr14	102533654	102534023	(4509695)	C	MER41A	LTR/ERV1	(169)	385	21	1255114
685	17.0	4.3	0.0	chr14	102534024	102534135	(4509583)	+	AluJo	SINE/Alu	13	129	(183)	1255116
2411	6.5	2.0	0.0	chr14	102534144	102534437	(4509281)	+	AluY	SINE/Alu	2	301	(10)	1255117
3946	8.6	3.2	1.1	chr14	102551038	102551410	(4492308)	+	MER41A	LTR/ERV1	1	379	(175)	1255153
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
4217	11.9	0.2	4.1	chr15	34656194	34656851	(67334338)	+	MER41B	LTR/ERV1	1	632	(2)	1283172
3031	8.2	0.4	11.3	chr15	41131296	41131816	(60859373)	+	LTR7B	LTR/ERV1	1	464	(0)	1292576
4768	8.9	0.6	0.0	chr15	45583636	45584264	(56406925)	C	MER41B	LTR/ERV1	(1)	633	1	1300981
1597	12.1	4.3	2.6	chr15	45584265	45584411	(56406778)	C	MER4D1	LTR/ERV1	(123)	777	624	1300980
697	19.6	0.0	2.1	chr15	45584389	45584546	(56406643)	+	FLAM_C	SINE/Alu	6	218	(84)	1300977
2518	6.1	0.3	0.0	chr15	50261713	50262008	(51729181)	C	AluSp	SINE/Alu	(16)	297	1	1307372
644	26.4	10.9	1.4	chr15	50262216	50262430	(51728759)	+	MIRb	SINE/MIR	4	241	(27)	1307373
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
1071	16.7	0.0	0.0	chr15	56735480	56735641	(45255548)	+	AluJo	SINE/Alu	136	297	(15)	1317509
887	13.8	9.7	4.9	chr15	56735646	56735850	(45255339)	C	LTR54	LTR/ERV1	(277)	233	18	1317508
2333	9.8	1.2	0.0	chr15	56735851	56736185	(45255004)	+	L1PB1	LINE/L1	5811	6149	(2)	1317510
413	31.0	12.4	4.8	chr15	56783011	56783278	(45207911)	C	L2c	LINE/L2	(3)	3384	3094	1317605
4264	13.7	0.2	0.2	chr15	56783337	56783970	(45207219)	+	MER41B	LTR/ERV1	1	634	(0)	1317606
3838	12.3	6.5	0.3	chr15	56784224	56784817	(45206372)	+	MER41B	LTR/ERV1	1	633	(1)	1317607
3474	13.1	4.0	1.1	chr15	58352020	58352550	(43638639)	C	MER41B	LTR/ERV1	(87)	547	1	1320027
1668	8.0	1.4	0.0	chr15	58352551	58352763	(43638426)	C	MER41-int	LTR/ERV1	(2)	5944	5729	1320027
4547	11.2	0.1	2.2	chr15	60021358	60022004	(41969185)	C	MER41B	LTR/ERV1	(0)	634	1	1323122
1705	20.8	9.6	5.4	chr15	60022019	60022661	(41968528)	C	MER21C	LTR/ERVL	(137)	794	15	1323123
4460	8.8	0.0	0.4	chr15	63226696	63227251	(38763938)	C	MER41A	LTR/ERV1	(0)	554	1	1328196
4235	16.2	2.6	2.7	chr15	63792673	63793125	(38198064)	C	MER21B	LTR/ERVL	(52)	816	362	1329140
4655	9.8	0.2	0.2	chr15	63793126	63793756	(38197433)	+	MER41B	LTR/ERV1	1	631	(3)	1329141
347	24.2	2.9	0.0	chr15	65185929	65186027	(36805162)	+	LTR33	LTR/ERVL	312	413	(102)	1332079
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
4640	12.0	0.0	0.3	chr15	66624022	66624655	(35366534)	+	MER41B	LTR/ERV1	3	634	(0)	1335108
3864	12.5	2.8	5.5	chr15	67900450	67900894	(34090295)	C	MER41B	LTR/ERV1	(204)	430	1	1337340
1304	23.1	7.4	5.0	chr15	67900895	67901183	(34090006)	C	L1MEg	LINE/L1	(939)	5207	4906	1337335
282	34.2	15.6	1.2	chr15	74389383	74389628	(27601561)	C	L2a	LINE/L2	(85)	3341	3054	1348752
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
2744	19.9	4.6	1.9	chr15	82093782	82094459	(19896730)	+	Tigger7	DNA/TcMar-Tigger	2	705	(0)	1362343
494	33.1	6.4	7.5	chr15	88537760	88538108	(13453081)	+	L2b	LINE/L2	3030	3374	(1)	1372565
3776	6.3	9.0	0.0	chr15	88538134	88538641	(13452548)	+	LTR6B	LTR/ERV1	1	558	(0)	1372566
193	24.8	11.4	6.4	chr15	89782104	89782228	(12208961)	+	MIR3	SINE/MIR	7	138	(70)	1374871
4195	11.7	4.3	1.0	chr15	89782290	89782735	(12208454)	+	MER41B	LTR/ERV1	2	449	(185)	1374872
3280	13.7	2.6	0.6	chr15	90648416	90648950	(11342239)	+	MER41B	LTR/ERV1	2	547	(87)	1376776
200	20.8	13.2	0.0	chr16	675308	675379	(89662966)	C	L2b	LINE/L2	(166)	3209	3127	1395068
237	6.1	0.0	0.0	chr16	675348	675380	(89662965)	C	L2c	LINE/L2	(226)	3161	3129	1395069
4241	8.2	0.7	2.0	chr16	1293859	1294279	(89044066)	C	MER41A	LTR/ERV1	(130)	424	1	1395699
684	17.3	0.8	6.8	chr16	1294280	1294311	(89044034)	+	AluJr	SINE/Alu	202	229	(83)	1395698
12	9.5	2.4	9.5	chr16	1783148	1783188	(88555157)	+	(GGCCG)n	Simple_repeat	1	42	(0)	1396376
13	27.1	0.0	2.1	chr16	2205516	2205562	(88132783)	+	G-rich	Low_complexity	1	47	(0)	1397037
235	17.4	9.2	1.4	chr16	2215546	2215615	(88122730)	C	L1ME3	LINE/L1	(3)	6159	6084	1397045
204	27.9	9.0	0.0	chr16	3263872	3263932	(87074413)	+	MIRc	SINE/MIR	82	148	(120)	1398854
3364	11.6	4.9	1.1	chr16	12611148	12611680	(77726665)	+	MER41A	LTR/ERV1	1	554	(0)	1418242
1420	11.6	3.6	0.0	chr16	15574371	15574586	(74763759)	C	LTR8	LTR/ERV1	(467)	224	1	1424743
3734	13.7	0.5	2.4	chr16	15574592	15574795	(74763550)	C	LTR39	LTR/ERV1	(166)	617	423	1424742
4275	14.7	0.0	0.2	chr16	17591112	17591746	(72746599)	+	MER41B	LTR/ERV1	1	634	(0)	1429437
2128	11.6	2.8	0.0	chr16	20745304	20745578	(69592767)	+	AluSz6	SINE/Alu	1	283	(29)	1436399
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
22	24.3	0.0	1.7	chr16	21501986	21502045	(68836300)	+	GA-rich	Low_complexity	1	60	(0)	1438014
12	24.3	0.0	0.0	chr16	21502176	21502209	(68836136)	+	GA-rich	Low_complexity	1	34	(0)	1438015
235	26.2	8.7	0.0	chr16	21952798	21952881	(68385464)	C	L2b	LINE/L2	(36)	3339	3248	1438992
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
330	21.3	13.9	11.0	chr16	23597463	23597585	(66740760)	+	HAL1b	LINE/L1	1844	1991	(430)	1442649
739	29.1	6.8	9.1	chr16	29655243	29655473	(60682872)	C	L2a	LINE/L2	(5)	3421	3196	1456211
289	26.6	1.2	0.0	chr16	30092840	30092918	(60245427)	C	MIRc	SINE/MIR	(77)	191	112	1457246
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
2978	7.8	9.3	1.4	chr16	30859452	30859878	(59478467)	+	LTR7B	LTR/ERV1	1	464	(0)	1459035
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
1843	24.7	7.0	1.1	chr16	30894574	30895183	(59443162)	+	L1ME3A	LINE/L1	5456	6103	(70)	1459125
17	17.2	0.0	2.4	chr16	31073753	31073793	(59264552)	+	G-rich	Low_complexity	1	41	(0)	1459562
595	31.4	8.6	3.2	chr16	31128961	31129213	(59209132)	+	MIRb	SINE/MIR	1	268	(0)	1459670
3949	15.2	2.5	1.9	chr16	46943138	46943588	(43394757)	C	MER41B	LTR/ERV1	(185)	449	2	1466370
1906	15.8	0.0	4.6	chr16	46943589	46943757	(43394588)	+	AluJr	SINE/Alu	153	309	(3)	1466369
4407	5.9	2.5	0.6	chr16	57109505	57109926	(33228419)	C	MER41A	LTR/ERV1	(122)	432	2	1484372
498	24.6	0.0	2.6	chr16	57109938	57110054	(33228291)	C	L4_A_Mam	LINE/RTE-X	(211)	4779	4666	1484374
3900	11.0	2.3	1.4	chr16	65768863	65769426	(24568919)	C	MER61E	LTR/ERV1	(0)	569	1	1498482
554	20.4	6.2	2.1	chr16	79972523	79972662	(10365683)	+	MER5A	DNA/hAT-Charlie	34	179	(10)	1524513
192	27.6	12.1	0.0	chr16	81007744	81007801	(9330544)	C	L2a	LINE/L2	(2)	3424	3359	1526294
2324	9.9	0.0	0.0	chr16	81007825	81008127	(9330218)	+	AluSx1	SINE/Alu	1	303	(9)	1526295
225	28.7	16.1	2.1	chr16	84607755	84607850	(5730495)	+	L2b	LINE/L2	3247	3358	(17)	1533188
2371	10.8	0.0	0.0	chr16	85322609	85322915	(5015430)	C	AluSx1	SINE/Alu	(5)	307	1	1534633
280	31.1	8.1	5.1	chr16	85322916	85323044	(5015301)	C	MIRb	SINE/MIR	(121)	147	13	1534632
205	31.0	2.7	1.4	chr16	85535934	85536005	(4802340)	C	L2a	LINE/L2	(15)	3411	3339	1535023
180	41.9	4.7	4.7	chr16	85570736	85570993	(4767352)	C	L2c	LINE/L2	(18)	3369	3112	1535078
469	24.0	6.7	3.1	chr16	88526422	88526550	(1811795)	+	MIRc	SINE/MIR	5	138	(130)	1540063
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
2360	14.7	15.2	0.0	chr17	6947859	6948288	(76309153)	+	LTR54	LTR/ERV1	1	507	(3)	1557949
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
760	28.1	2.8	8.2	chr17	13638778	13638980	(69618461)	+	MIR	SINE/MIR	10	204	(58)	1570117
4297	11.5	0.9	0.6	chr17	13638981	13639610	(69617831)	+	MER41B	LTR/ERV1	3	634	(0)	1570118
4148	15.3	0.8	0.5	chr17	27575049	27575680	(55681761)	C	MER41B	LTR/ERV1	(0)	634	1	1587068
203	30.4	3.7	9.7	chr17	27575681	27575701	(55681740)	+	L2c	LINE/L2	3376	3393	(33)	1587067
1569	23.3	12.9	0.5	chr17	27575796	27576217	(55681224)	C	MLT1E2	LTR/ERVL-MaLR	(8)	619	138	1587069
26	19.0	2.3	5.6	chr17	28710974	28711060	(54546381)	+	G-rich	Low_complexity	1	89	(0)	1589185
838	9.1	11.2	1.4	chr17	39014134	39014172	(44243269)	+	MER21A	LTR/ERVL	1	41	(890)	1609126
4351	12.1	1.4	4.1	chr17	39014173	39014879	(44242562)	+	LTR8	LTR/ERV1	1	688	(3)	1609127
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
857	19.9	8.6	0.0	chr17	41678325	41678495	(41578946)	+	LTR27D	LTR/ERV1	287	473	(142)	1614027
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
1967	11.0	3.6	0.0	chr17	41691803	41692094	(41565347)	C	AluSq	SINE/Alu	(9)	304	2	1614056
371	23.4	4.1	2.1	chr17	41692484	41692579	(41564862)	+	Tigger3a	DNA/TcMar-Tigger	1	98	(250)	1614057
2928	11.8	2.4	0.2	chr17	42535068	42535524	(40721917)	C	MER41B	LTR/ERV1	(167)	467	1	1615833
434	30.2	8.0	4.7	chr17	42535586	42536003	(40721438)	+	L2c	LINE/L2	2938	3387	(0)	1615843
3928	10.0	0.2	0.0	chr17	43352269	43352788	(39904653)	C	MER41C	LTR/ERV1	(0)	521	1	1617616
3905	10.1	0.7	0.0	chr17	43352789	43353333	(39904108)	C	PRIMA41-int	LTR/ERV1	(0)	7756	7208	1617616
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
12	8.1	3.6	3.5	chr17	47877881	47877908	(35379533)	+	(CTCC)n	Simple_repeat	1	29	(0)	1626876
2232	8.6	0.0	1.6	chr17	47931060	47931363	(35326078)	+	AluSz	SINE/Alu	1	299	(13)	1626970
4579	9.7	2.2	1.0	chr17	48825536	48825977	(34431464)	C	MER41B	LTR/ERV1	(184)	450	1	1628573
495	29.0	7.1	0.0	chr17	48826001	48826169	(34431272)	+	MIRb	SINE/MIR	20	201	(67)	1628576
3820	10.5	2.1	0.4	chr17	49076572	49077089	(34180352)	C	MER41B	LTR/ERV1	(107)	527	1	1629162
822	24.3	3.8	1.0	chr17	49077101	49077304	(34180137)	C	LTR108e_Mam	LTR/ERVL	(28)	520	311	1629165
2785	8.0	0.4	16.9	chr17	53608086	53608641	(29648800)	+	LTR7B	LTR/ERV1	1	464	(0)	1636971
20	0.0	6.7	0.0	chr17	58328826	58328855	(24928586)	+	(CCT)n	Simple_repeat	1	32	(0)	1644825
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2263	7.3	0.0	0.4	chr17	59842395	59842669	(23414772)	+	AluSx	SINE/Alu	1	274	(38)	1648068
2077	11.9	0.0	0.0	chr17	59842843	59843145	(23414296)	C	AluSx1	SINE/Alu	(0)	312	5	1648069
517	18.1	0.0	1.2	chr17	59843641	59843723	(23413718)	+	AluJr	SINE/Alu	1	82	(230)	1648070
2192	8.6	3.6	0.3	chr17	59843731	59844022	(23413419)	+	AluSp	SINE/Alu	1	302	(11)	1648071
1433	21.1	3.3	0.0	chr17	59844108	59844372	(23413069)	C	AluJb	SINE/Alu	(37)	275	2	1648073
2275	11.1	1.6	0.0	chr17	59844392	59844697	(23412744)	+	AluSz	SINE/Alu	1	311	(1)	1648074
3410	17.2	2.5	5.6	chr17	62142639	62143205	(21114236)	C	L1MB3	LINE/L1	(47)	6136	5583	1652357
2331	11.2	0.0	0.0	chr17	62143206	62143510	(21113931)	C	AluSp	SINE/Alu	(8)	305	1	1652360
4052	10.4	1.9	2.1	chr17	62143664	62143828	(21113613)	+	MER61E	LTR/ERV1	1	161	(408)	1652362
2278	8.5	0.0	2.9	chr17	62143829	62144135	(21113306)	+	AluSg	SINE/Alu	1	298	(12)	1652363
2297	11.2	0.3	0.0	chr17	62173663	62173973	(21083468)	+	AluSq	SINE/Alu	2	313	(0)	1652433
261	26.5	1.7	5.2	chr17	63460088	63460206	(19797235)	+	L2b	LINE/L2	3054	3166	(221)	1654738
3681	8.7	2.7	3.6	chr17	63460261	63460786	(19796655)	+	MER41C	LTR/ERV1	1	521	(0)	1654739
3248	5.2	0.4	12.2	chr17	68795454	68795979	(14461462)	C	LTR7B	LTR/ERV1	(0)	464	1	1664807
2309	9.0	0.0	0.0	chr17	75775945	75776234	(7481207)	+	AluSc	SINE/Alu	2	291	(18)	1676749
2818	13.1	3.6	0.0	chr17	76601713	76602163	(6655278)	C	MER41B	LTR/ERV1	(166)	468	1	1678372
1527	16.3	6.2	9.5	chr17	77109400	77109649	(6147792)	C	LTR54	LTR/ERV1	(259)	251	1	1679471
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
864	20.7	6.5	2.5	chr17	79011382	79011619	(4245822)	C	L1ME3D	LINE/L1	(95)	6147	5900	1682844
4410	12.1	1.9	0.2	chr17	79011645	79012265	(4245176)	+	MER41B	LTR/ERV1	3	634	(0)	1682845
467	32.7	4.9	3.1	chr17	80254896	80255154	(3002287)	+	L1ME3G	LINE/L1	308	571	(353)	1684750
16	14.5	3.1	9.1	chr17	81917970	81917993	(1339448)	+	(GCGG)n	Simple_repeat	1	42	(24)	1686906
14	8.2	0.0	3.6	chr17	81917994	81918021	(1339420)	+	(GGCCG)n	Simple_repeat	1	28	(0)	1686907
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
18	19.8	6.9	0.0	chr17	82098746	82098803	(1158638)	+	(CGCGG)n	Simple_repeat	1	62	(0)	1687137
447	28.2	4.7	1.2	chr18	711298	711507	(79661778)	C	L1ME3C	LINE/L1	(47)	6195	5974	1690296
3583	7.4	2.6	0.0	chr18	874031	874487	(79498798)	C	MER41A	LTR/ERV1	(85)	469	1	1690658
11097	8.2	1.9	2.5	chr18	874488	876030	(79497255)	C	MER41-int	LTR/ERV1	(2)	5944	4411	1690658
15	28.0	3.5	1.7	chr18	904783	904840	(79468445)	+	(CT)n	Simple_repeat	1	60	(0)	1690702
13	25.9	0.0	2.3	chr18	904899	904941	(79468344)	+	(GCT)n	Simple_repeat	1	43	(0)	1690703
2748	2.9	0.3	0.0	chr18	3602314	3602623	(76770662)	+	AluY	SINE/Alu	1	311	(0)	1694733
54082	6.1	1.9	0.5	chr18	8914110	8920902	(71452383)	+	Harlequin-int	LTR/ERV1	1	6896	(0)	1702087
2443	18.3	7.9	4.8	chr18	8944000	8944368	(71428917)	+	MER89	LTR/ERV1	1	399	(160)	1702139
1818	15.5	0.4	0.0	chr18	8944369	8944632	(71428653)	C	AluSz6	SINE/Alu	(47)	265	1	1702140
250	12.8	0.0	0.0	chr18	9009275	9009313	(71363972)	+	MER2B	DNA/TcMar-Tigger	298	336	(0)	1702258
2155	11.2	0.3	1.0	chr18	9009364	9009659	(71363626)	+	AluSp	SINE/Alu	1	294	(19)	1702259
14	28.8	0.0	0.0	chr18	9136873	9136919	(71236366)	+	(GGCGAC)n	Simple_repeat	1	47	(0)	1702521
14	21.9	2.0	3.9	chr18	9137107	9137157	(71236128)	+	(CGCCC)n	Simple_repeat	1	52	(0)	1702522
7327	18.6	3.1	5.0	chr18	9876145	9876951	(70496334)	+	L1MC3	LINE/L1	7004	7785	(0)	1703784
1925	16.5	9.3	1.9	chr18	22468269	22468645	(57904640)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1714603
1137	14.9	0.5	0.0	chr18	22468689	22468896	(57904389)	C	L1M1	LINE/L1	(7294)	271	63	1714604
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
185	35.5	3.1	5.3	chr18	35117273	35117403	(45255882)	+	MamRTE1	LINE/RTE-BovB	144	271	(3541)	1732869
1227	19.5	6.1	2.0	chr18	54013539	54013911	(26359374)	+	LTR7B	LTR/ERV1	140	464	(0)	1760573
410	23.2	6.0	0.0	chr19	510852	510976	(58106640)	C	MER20	DNA/hAT-Charlie	(57)	162	30	1797052
307	23.1	7.1	0.0	chr19	944135	944212	(57673404)	C	L2b	LINE/L2	(18)	3357	3274	1797940
29	15.9	0.0	0.0	chr19	944326	944374	(57673242)	+	(GT)n	Simple_repeat	1	49	(0)	1797941
191	30.4	5.1	0.0	chr19	1606258	1606313	(57011303)	+	L2b	LINE/L2	3123	3181	(194)	1799133
19	26.3	3.7	2.4	chr19	1652614	1652694	(56964922)	+	(CCGCG)n	Simple_repeat	1	84	(0)	1799198
418	23.9	8.2	0.9	chr19	1747058	1747170	(56870446)	+	MIR	SINE/MIR	48	169	(93)	1799448
1201	21.9	14.0	0.9	chr19	2949859	2950319	(55667297)	+	LTR65	LTR/ERV1	1	524	(145)	1801984
181	24.5	0.0	2.0	chr19	3605134	3605183	(55012433)	+	MIRc	SINE/MIR	101	149	(119)	1803637
1070	28.1	2.0	0.3	chr19	4633083	4633448	(53984168)	C	L2a	LINE/L2	(319)	3107	2736	1806060
249	27.3	6.1	5.4	chr19	4633392	4633538	(53984078)	+	MIR3	SINE/MIR	8	155	(53)	1806072
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
31	36.1	1.4	0.7	chr19	5799597	5799741	(52817875)	+	(TG)n	Simple_repeat	1	147	(0)	1808880
2209	8.7	0.5	6.0	chr19	5857252	5857653	(52759963)	+	LTR7B	LTR/ERV1	85	464	(0)	1808995
1594	15.1	3.0	6.9	chr19	9635997	9636345	(48981271)	C	LTR7B	LTR/ERV1	(0)	464	130	1817815
1551	14.5	4.6	6.0	chr19	9741826	9742178	(48875438)	+	LTR7B	LTR/ERV1	117	464	(0)	1818012
364	23.8	8.0	3.4	chr19	9751456	9751668	(48865948)	+	LTR7B	LTR/ERV1	126	284	(188)	1818015
1466	17.0	4.8	3.6	chr19	9751643	9751972	(48865644)	+	LTR7B	LTR/ERV1	131	464	(0)	1818015
245	29.8	11.6	0.8	chr19	10813008	10813138	(47804478)	+	MIR	SINE/MIR	16	165	(103)	1820742
201	20.4	2.2	0.0	chr19	17336676	17336719	(41280897)	+	MamTip2	DNA/hAT-Tip100	100	144	(161)	1836059
382	32.4	9.2	0.0	chr19	17336833	17337039	(41280577)	C	L2b	LINE/L2	(158)	3217	2990	1836060
11	16.9	2.9	2.8	chr19	18388462	18388496	(40229120)	+	(GCGCCT)n	Simple_repeat	1	36	(0)	1838793
364	27.8	6.5	0.9	chr19	18417204	18417319	(40200297)	+	L2c	LINE/L2	3260	3382	(5)	1838866
217	26.3	4.8	9.2	chr19	18417406	18417514	(40200102)	+	MIRc	SINE/MIR	23	126	(142)	1838867
459	21.4	11.1	1.2	chr19	18479123	18479292	(40138324)	+	MER20	DNA/hAT-Charlie	31	219	(0)	1838934
4387	7.6	0.2	0.0	chr19	28522096	28522646	(30094970)	+	MER41A	LTR/ERV1	3	554	(0)	1848916
266	28.1	12.6	4.0	chr19	32628529	32628702	(25988914)	C	MIRc	SINE/MIR	(45)	223	33	1855179
1105	11.6	3.6	1.0	chr19	32686829	32687020	(25930596)	C	LTR51	LTR/ERV1	(78)	593	397	1855306
451	7.8	3.0	0.0	chr19	32687022	32687085	(25930531)	+	MER41B	LTR/ERV1	1	66	(568)	1855307
615	12.3	19.7	0.0	chr19	32687086	32687199	(25930417)	+	LTR9	LTR/ERV1	1	142	(470)	1855308
4497	9.9	3.9	0.2	chr19	35165102	35165711	(23451905)	C	MER41B	LTR/ERV1	(0)	634	1	1859854
1109	17.3	4.7	2.6	chr19	35165712	35165781	(23451835)	C	Tigger4a	DNA/TcMar-Tigger	(171)	65	1	1859853
897	18.6	4.7	0.0	chr19	35165817	35166045	(23451571)	C	L2a	LINE/L2	(310)	3116	2868	1859852
4376	7.0	1.3	0.0	chr19	35204673	35205219	(23412397)	C	MER41A	LTR/ERV1	(0)	554	1	1859931
555	25.1	10.3	1.4	chr19	35205270	35205548	(23412068)	C	L2b	LINE/L2	(195)	3231	2931	1859932
5711	15.2	2.7	2.8	chr19	39258242	39259208	(19358408)	C	LTR13A	LTR/ERVK	(0)	966	1	1868683
366	22.6	7.1	2.0	chr19	42396641	42396773	(16220843)	+	MSR1	Satellite	1	139	(3)	1875197
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
2823	7.7	0.4	17.1	chr19	46102204	46102754	(12514862)	C	LTR7B	LTR/ERV1	(5)	459	1	1882957
2449	6.1	0.7	0.7	chr19	46109321	46109615	(12508001)	C	AluY	SINE/Alu	(16)	295	1	1882958
2873	6.3	0.4	22.6	chr19	46109616	46109974	(12507642)	C	LTR7B	LTR/ERV1	(229)	235	1	1882957
411	26.8	1.7	8.9	chr19	46192140	46192285	(12425331)	+	MIR	SINE/MIR	16	149	(113)	1883092
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
1487	9.0	1.0	1.0	chr19	48254471	48254670	(10362946)	+	AluSx3	SINE/Alu	1	200	(111)	1888294
2155	15.2	6.5	3.7	chr19	48254703	48255085	(10362531)	+	MER65A	LTR/ERV1	3	406	(39)	1888295
298	21.0	6.9	1.2	chr19	48872685	48872766	(9744850)	C	MSR1	Satellite	(18)	93	7	1889835
775	14.5	0.0	3.1	chr19	48967917	48968044	(9649572)	+	FLAM_C	SINE/Alu	5	128	(5)	1890083
323	28.9	12.2	5.2	chr19	49578936	49579291	(9038325)	+	L1MC5a	LINE/L1	8716	9057	(247)	1891446
2218	15.6	13.3	0.2	chr19	49579292	49579734	(9037882)	+	LTR54	LTR/ERV1	1	510	(0)	1891461
380	36.2	3.2	0.0	chr19	49676362	49676513	(8941103)	C	L2b	LINE/L2	(219)	3156	3000	1891671
1956	12.2	0.3	7.4	chr19	50603257	50603592	(8014024)	C	AluSz	SINE/Alu	(0)	312	1	1893902
216	30.4	1.7	2.5	chr19	50835919	50836036	(7781580)	C	MIRb	SINE/MIR	(27)	241	125	1894437
434	21.7	15.9	1.2	chr19	51460566	51460762	(7156854)	+	MLT2F	LTR/ERVL	1	234	(429)	1895672
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
11	24.3	5.5	1.7	chr19	58573164	58573218	(44398)	+	(CCTTCC)n	Simple_repeat	1	58	(0)	1909747
4767	8.3	0.9	2.0	chr2	9169203	9169843	(233023686)	C	MER41B	LTR/ERV1	(0)	634	1	1922479
4057	10.2	4.6	7.1	chr2	10276079	10276194	(231917335)	C	MER41B	LTR/ERV1	(533)	101	1	1924497
4775	9.9	1.3	0.2	chr2	12083869	12084495	(230109034)	+	MER41B	LTR/ERV1	1	634	(0)	1927744
455	25.4	9.1	15.1	chr2	26749794	26749864	(215443665)	C	L1MC5a	LINE/L1	(96)	2681	2635	1950529
6908	10.5	0.5	4.4	chr2	26749865	26750871	(215442658)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1950531
228	25.9	8.4	0.0	chr2	26758485	26758586	(215434943)	+	L2c	LINE/L2	3026	3139	(248)	1950549
310	33.8	11.7	4.1	chr2	37196705	37197019	(204996510)	C	L1M4b	LINE/L1	(6274)	593	252	1967324
766	19.9	7.0	2.9	chr2	39150209	39150439	(203043090)	+	MLT1H2	LTR/ERVL-MaLR	284	555	(0)	1970659
4212	8.2	0.6	1.6	chr2	39468180	39468739	(202724790)	+	MER41A	LTR/ERV1	1	554	(0)	1971259
570	14.2	9.5	1.5	chr2	42919209	42919344	(199274185)	C	MER121	DNA/hAT?	(137)	264	117	1976549
4595	9.4	0.8	0.5	chr2	46753518	46754147	(195439382)	C	MER41B	LTR/ERV1	(0)	634	3	1982754
1459	26.1	10.8	2.3	chr2	46754148	46754580	(195438949)	C	Tigger13a	DNA/TcMar-Tigger	(164)	607	131	1982753
358	34.2	14.0	1.5	chr2	68438844	68439208	(173754321)	C	L2a	LINE/L2	(313)	3113	2701	2015613
12	28.2	1.9	1.9	chr2	70142416	70142468	(172051061)	+	(CCGC)n	Simple_repeat	1	54	(0)	2018486
249	26.2	15.1	3.6	chr2	88015989	88016099	(154177430)	+	AluJb	SINE/Alu	118	243	(59)	2045130
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
4327	10.9	3.5	1.0	chr2	96921850	96922343	(145271186)	+	MER41B	LTR/ERV1	1	509	(125)	2053011
2912	7.0	1.1	17.1	chr2	98044553	98045106	(144148423)	C	LTR7B	LTR/ERV1	(0)	464	1	2054466
320	25.3	9.6	6.8	chr2	100292303	100292463	(141901066)	C	L1MCc	LINE/L1	(6034)	389	224	2057670
847	28.7	11.7	2.3	chr2	105467480	105467825	(136725704)	C	L2	LINE/L2	(1259)	2160	1788	2064996
4790	8.9	0.5	0.8	chr2	105467826	105468461	(136725068)	+	MER41B	LTR/ERV1	1	634	(0)	2064997
1550	11.3	1.1	10.8	chr2	111999704	112000000	(130193529)	C	LTR7B	LTR/ERV1	(0)	464	197	2074393
1494	8.4	0.0	8.1	chr2	112000002	112000247	(130193282)	C	LTR7B	LTR/ERV1	(238)	226	1	2074394
1962	17.6	11.6	3.0	chr2	127927405	127927682	(114265847)	C	LTR54	LTR/ERV1	(175)	335	2	2098288
989	23.4	3.5	1.0	chr2	127927683	127927984	(114265545)	+	L1MB4	LINE/L1	2303	2612	(4905)	2098290
6443	11.2	2.6	2.0	chr2	142695091	142696086	(99497443)	C	LTR5B	LTR/ERVK	(0)	1002	1	2119127
6309	13.0	8.1	2.8	chr2	142696087	142697500	(99496029)	+	L1PBa	LINE/L1	1881	3385	(3530)	2119125
24	13.8	0.0	7.7	chr2	148644625	148644689	(93548840)	+	GA-rich	Low_complexity	1	65	(0)	2126931
2653	11.2	13.6	0.0	chr2	151380467	151380905	(90812624)	C	LTR54	LTR/ERV1	(0)	510	3	2130784
15	24.1	1.4	6.8	chr2	151828341	151828412	(90365117)	+	(GCC)n	Simple_repeat	1	73	(0)	2131422
13	13.0	0.0	3.6	chr2	152717632	152717659	(89475870)	+	GA-rich	Low_complexity	1	28	(0)	2132825
1050	28.6	6.9	1.8	chr2	157182249	157182632	(85010897)	C	MER130	DNA	(226)	1368	964	2138400
1616	21.1	4.8	3.8	chr2	157937764	157938133	(84255396)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2139480
1782	16.7	25.9	3.6	chr2	169711625	169712096	(72481433)	C	LTR18B	LTR/ERVL	(0)	614	1	2155456
6104	21.6	8.1	6.6	chr2	169840413	169841348	(72352181)	C	MLT1A1-int	LTR/ERVL-MaLR	(439)	1296	377	2155714
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
1261	27.1	10.0	4.8	chr2	170264251	170264553	(71928976)	C	MLT1H1	LTR/ERVL-MaLR	(211)	344	3	2156369
2802	6.4	2.6	15.7	chr2	171497618	171498047	(70695482)	C	LTR7B	LTR/ERV1	(0)	464	115	2158529
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
27	27.8	4.9	3.5	chr2	173964826	173964867	(68228662)	+	(CTCCCCT)n	Simple_repeat	4	170	(0)	2162461
12	17.1	2.9	2.8	chr2	173964835	173964869	(68228660)	+	(CGCT)n	Simple_repeat	1	36	(0)	2162462
13	7.8	3.5	3.3	chr2	173965000	173965028	(68228501)	+	(GGAGG)n	Simple_repeat	1	30	(0)	2162463
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
4076	10.5	6.3	0.2	chr2	181430258	181430850	(60762679)	C	MER41B	LTR/ERV1	(2)	632	1	2172723
428	31.4	8.4	9.5	chr2	181430851	181431060	(60762469)	C	MLT1J	LTR/ERVL-MaLR	(310)	202	1	2172722
24264	7.1	0.4	0.1	chr2	181798562	181804707	(60388822)	C	L1PA6	LINE/L1	(3)	6151	1	2173141
1503	17.1	6.0	4.2	chr2	189382591	189382995	(52810534)	C	LTR7B	LTR/ERV1	(0)	464	142	2182765
4293	6.8	1.6	0.0	chr2	191599641	191600185	(50593344)	+	MER41A	LTR/ERV1	1	554	(0)	2186120
4057	10.4	1.7	8.0	chr2	195368772	195369448	(46824081)	C	MER41B	LTR/ERV1	(0)	634	1	2190796
4841	2.5	0.2	0.2	chr2	201126038	201126595	(41066934)	C	LTR6B	LTR/ERV1	(0)	558	1	2199587
480	27.2	16.2	1.4	chr2	201126596	201126815	(41066714)	+	LTR67B	LTR/ERVL	338	596	(24)	2199588
4325	12.6	2.8	1.0	chr2	204354054	204354744	(37838785)	C	LTR62	LTR/ERVL	(5)	704	1	2205503
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
1399	19.0	3.0	9.3	chr2	207798197	207798423	(34395106)	+	MER63B	DNA/hAT-Blackjack	106	339	(97)	2210720
4511	8.9	3.0	0.2	chr2	207798424	207799038	(34394491)	+	MER41B	LTR/ERV1	1	633	(1)	2210721
4360	16.6	1.9	3.0	chr2	216114477	216115267	(26078262)	+	MER50C	LTR/ERV1	1	782	(0)	2222208
2103	11.9	6.2	0.0	chr2	230654434	230654769	(11538760)	C	MER51B	LTR/ERV1	(19)	358	1	2245452
4276	6.1	2.5	0.9	chr2	230654862	230655291	(11538238)	+	MER41A	LTR/ERV1	1	436	(118)	2245453
3207	6.1	5.0	3.5	chr2	231430429	231430885	(10762644)	+	LTR7B	LTR/ERV1	1	464	(0)	2246848
3857	8.5	3.8	1.3	chr20	21656353	21656887	(42787280)	+	PRIMA41-int	LTR/ERV1	7208	7756	(0)	2297426
4316	7.9	0.2	0.0	chr20	21656888	21657407	(42786760)	+	MER41C	LTR/ERV1	1	521	(0)	2297426
289	33.1	0.8	3.3	chr20	31661986	31662122	(32782045)	C	MIR	SINE/MIR	(46)	162	29	2306560
360	21.0	0.3	5.2	chr20	32208212	32208327	(32235840)	C	MIR3	SINE/MIR	(25)	183	78	2307886
565	12.8	3.4	0.0	chr20	33489534	33489619	(30954548)	C	AluJb	SINE/Alu	(223)	89	1	2310879
16	0.0	4.3	0.0	chr20	34955253	34955275	(29488892)	+	(ATGA)n	Simple_repeat	1	24	(0)	2314220
2161	17.8	9.2	3.3	chr20	36083085	36083264	(28360903)	+	MLT2B1	LTR/ERVL	268	490	(30)	2316807
3733	7.5	0.9	10.3	chr20	36083265	36083722	(28360445)	+	MER41A	LTR/ERV1	1	463	(91)	2316809
2151	14.1	2.8	3.0	chr20	37542174	37542568	(26901599)	C	LTR47A2	LTR/ERVL	(38)	394	1	2320221
1259	16.9	8.3	10.4	chr20	37542579	37542703	(26901464)	+	L1ME2z	LINE/L1	6071	6200	(244)	2320220
4551	11.9	0.6	0.3	chr20	48139141	48139772	(16304395)	C	MER41B	LTR/ERV1	(0)	634	1	2341528
224	38.8	8.8	3.9	chr20	48139773	48139983	(16304184)	C	L2c	LINE/L2	(146)	3241	3020	2341527
408	27.5	4.2	1.4	chr20	50145876	50146015	(14298152)	C	MIRb	SINE/MIR	(121)	147	4	2346193
189	33.5	13.0	2.2	chr20	50146206	50146431	(14297736)	+	L2b	LINE/L2	3070	3323	(52)	2346194
4331	10.9	0.6	6.2	chr20	51338509	51339180	(13104987)	C	MER41B	LTR/ERV1	(0)	634	1	2348941
646	26.2	15.5	0.0	chr20	51339197	51339398	(13104769)	C	MIR	SINE/MIR	(11)	251	13	2348942
4360	11.5	1.3	2.2	chr20	59012309	59012469	(5431698)	C	MER41B	LTR/ERV1	(478)	156	1	2363806
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
2452	8.7	0.4	22.7	chr21	16391958	16392555	(30317428)	C	LTR7B	LTR/ERV1	(0)	464	1	2380385
4012	14.0	2.7	1.8	chr21	17690240	17690866	(29019117)	+	MER41B	LTR/ERV1	1	633	(1)	2382065
3422	14.5	0.8	7.1	chr21	28791771	28792430	(17917553)	+	MER41B	LTR/ERV1	17	634	(0)	2397267
705	14.4	30.0	0.0	chr21	33300620	33300799	(13409184)	+	MLT1A0	LTR/ERVL-MaLR	1	257	(108)	2404689
681	8.1	0.0	0.0	chr21	33300804	33300889	(13409094)	+	MER41B	LTR/ERV1	3	88	(546)	2404690
287	19.7	0.0	2.9	chr21	33300891	33300958	(13409025)	+	MLT1A0	LTR/ERVL-MaLR	402	467	(0)	2404689
221	29.2	9.6	2.6	chr21	36298130	36298245	(10411738)	C	MIRb	SINE/MIR	(37)	231	107	2409558
2059	14.4	8.8	12.3	chr21	36327452	36327874	(10382109)	C	LTR54	LTR/ERV1	(50)	460	22	2409624
2218	12.3	0.0	0.0	chr21	36327875	36328175	(10381808)	C	AluSz	SINE/Alu	(10)	302	2	2409628
16	11.7	3.6	0.0	chr21	37073463	37073490	(9636493)	+	(GT)n	Simple_repeat	1	29	(0)	2410978
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
259	26.2	15.7	9.9	chr21	39314756	39314988	(7394995)	+	MIR	SINE/MIR	14	262	(0)	2414336
582	11.9	6.5	9.0	chr21	39345348	39345458	(7364525)	C	U13_	snRNA	(0)	108	1	2414407
8432	7.5	2.5	0.0	chr21	39358522	39359592	(7350391)	+	PRIMA41-int	LTR/ERV1	6659	7756	(0)	2414432
2415	9.8	1.1	5.7	chr21	39359593	39359961	(7350022)	+	MER41C	LTR/ERV1	1	352	(169)	2414432
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
225	31.5	5.3	2.7	chr21	46323406	46323552	(386431)	C	MER4E	LTR/ERV1	(153)	613	463	2423810
235	22.1	3.4	5.5	chr21	46323663	46323753	(386230)	+	LTR16A	LTR/ERVL	135	223	(228)	2423811
318	28.3	8.1	7.0	chr22	19068860	19069030	(31749438)	C	MIRc	SINE/MIR	(6)	262	90	2431378
12	13.9	0.0	8.1	chr22	19122076	19122112	(31696356)	+	(CCCCG)n	Simple_repeat	1	37	(0)	2431479
186	27.3	3.5	0.0	chr22	19172217	19172271	(31646197)	+	L3	LINE/CR1	3936	3992	(107)	2431569
190	37.9	16.0	3.1	chr22	19201805	19202472	(31615996)	+	L2a	LINE/L2	699	1468	(1951)	2431602
867	31.6	20.9	2.2	chr22	19202723	19203032	(31615436)	+	L2a	LINE/L2	1406	1813	(1606)	2431602
14547	12.4	3.0	5.6	chr22	19259388	19260493	(31557975)	+	Tigger1	DNA/TcMar-Tigger	55	1181	(1237)	2431681
15	4.8	0.0	0.0	chr22	19291658	19291679	(31526789)	+	(CGG)n	Simple_repeat	1	22	(0)	2431742
72	16.6	2.3	3.4	chr22	19291736	19291908	(31526560)	+	(TGCCCC)n	Simple_repeat	1	177	(0)	2431743
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
2286	12.2	0.0	0.0	chr22	19317024	19317327	(31501141)	+	AluSz	SINE/Alu	5	308	(4)	2431795
232	33.1	12.7	0.0	chr22	19398357	19398507	(31419961)	+	MIRb	SINE/MIR	74	246	(22)	2431929
214	26.2	0.0	20.8	chr22	19398630	19398694	(31419774)	+	MIRc	SINE/MIR	104	162	(106)	2431930
1806	17.1	3.0	0.3	chr22	19398695	19398986	(31419482)	+	AluJb	SINE/Alu	1	300	(12)	2431931
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
2181	10.9	0.7	2.0	chr22	19436099	19436401	(31382067)	C	AluSz6	SINE/Alu	(13)	299	1	2432001
2302	8.0	0.7	2.3	chr22	19436423	19436723	(31381745)	+	AluYk2	SINE/Alu	1	296	(15)	2432002
1082	16.6	0.6	0.0	chr22	19446707	19446869	(31371599)	C	AluJr	SINE/Alu	(15)	297	134	2432023
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
19	21.5	0.0	8.0	chr22	19478991	19479065	(31339403)	+	(CCGCC)n	Simple_repeat	1	75	(0)	2432066
18	10.7	4.5	4.3	chr22	19479140	19479183	(31339285)	+	(CCG)n	Simple_repeat	1	46	(0)	2432067
4727	12.0	3.0	7.0	chr22	19586761	19587377	(31231091)	C	LTR1A2	LTR/ERV1	(251)	586	7	2432268
1022	13.8	0.0	2.5	chr22	19587389	19587548	(31230920)	C	AluJo	SINE/Alu	(71)	241	86	2432270
3905	19.2	4.8	1.8	chr22	19779977	19780770	(31037698)	C	L1MB3	LINE/L1	(0)	6291	5492	2432535
4545	12.1	3.8	1.2	chr22	19808981	19809756	(31008712)	+	LTR1A2	LTR/ERV1	41	837	(0)	2432557
2071	18.5	6.7	2.8	chr22	19942683	19943183	(30875285)	C	MER67A	LTR/ERV1	(21)	522	1	2432714
818	24.7	2.9	5.3	chr22	19943187	19943365	(30875103)	C	MER31-int	LTR/ERV1	(24)	4912	4731	2432714
1949	15.8	2.6	0.0	chr22	19943366	19943669	(30874799)	+	AluJr	SINE/Alu	1	312	(0)	2432715
20	16.6	4.2	0.0	chr22	20011623	20011670	(30806798)	+	(CATGTG)n	Simple_repeat	1	50	(0)	2432790
17	21.9	4.5	5.4	chr22	20021145	20021232	(30797236)	+	(GGCTCCG)n	Simple_repeat	1	92	(0)	2432801
1918	20.9	4.6	5.6	chr22	20059275	20059960	(30758508)	C	L1MB8	LINE/L1	(418)	5766	4993	2432853
1737	15.5	1.4	3.4	chr22	20059961	20060068	(30758400)	C	AluJb	SINE/Alu	(17)	295	188	2432856
2574	5.9	0.0	0.0	chr22	20060069	20060372	(30758096)	+	AluY	SINE/Alu	2	305	(6)	2432857
18	20.3	4.5	2.9	chr22	20084326	20084391	(30734077)	+	(GCATGT)n	Simple_repeat	1	69	(0)	2432897
16	5.2	0.0	0.0	chr22	20111707	20111726	(30706742)	+	(C)n	Simple_repeat	1	20	(0)	2432922
14	25.2	0.0	5.3	chr22	20116722	20116778	(30701690)	+	(CCCTC)n	Simple_repeat	1	57	(0)	2432923
13	18.4	1.2	4.9	chr22	20117489	20117554	(30700914)	+	G-rich	Low_complexity	1	63	(0)	2432925
4396	10.7	14.0	2.2	chr22	20205678	20206413	(30612055)	C	LTR1A2	LTR/ERV1	(0)	837	1	2433014
1495	21.9	0.3	6.5	chr22	20257290	20257674	(30560794)	+	MLT1A	LTR/ERVL-MaLR	14	374	(0)	2433053
14	16.4	2.9	0.0	chr22	20320135	20320168	(30498300)	+	(CCGCC)n	Simple_repeat	1	35	(0)	2433108
1248	19.5	11.4	0.0	chr22	20418406	20418662	(30399806)	+	7SLRNA	srpRNA	14	303	(17)	2433283
11	15.4	8.9	2.0	chr22	20430862	20430906	(30387562)	+	(GGCCACT)n	Simple_repeat	1	49	(0)	2433305
12	31.0	0.0	1.9	chr22	20430944	20430996	(30387472)	+	(CCCCCCT)n	Simple_repeat	1	53	(0)	2433306
290	35.0	7.2	2.7	chr22	20456204	20456388	(30362080)	+	L2a	LINE/L2	3228	3421	(5)	2433339
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
324	24.2	15.2	2.6	chr22	20526434	20526628	(30291840)	C	HAL1	LINE/L1	(295)	2212	1989	2433497
288	16.1	0.4	0.4	chr22	20526693	20526750	(30291718)	C	AluSx	SINE/Alu	(234)	86	29	2433498
232	17.4	0.0	8.0	chr22	20546084	20546133	(30272335)	C	L1MC5a	LINE/L1	(345)	2432	2387	2433532
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
2118	10.7	0.3	0.0	chr22	20730579	20730867	(30087601)	C	AluSx1	SINE/Alu	(20)	292	3	2433825
293	30.6	7.7	2.5	chr22	20730868	20730894	(30087574)	C	Tigger15a	DNA/TcMar-Tigger	(149)	566	539	2433826
1656	19.9	0.0	1.3	chr22	20730895	20731210	(30087258)	+	AluJr	SINE/Alu	1	312	(0)	2433827
400	31.6	2.9	0.8	chr22	20940830	20940963	(29877505)	C	L3	LINE/CR1	(2234)	1865	1729	2434278
250	35.6	9.4	6.1	chr22	20941148	20941425	(29877043)	C	L3	LINE/CR1	(2700)	1399	1112	2434278
188	33.9	3.0	0.0	chr22	20967355	20967419	(29851049)	C	MIRb	SINE/MIR	(110)	158	92	2434340
216	34.1	7.1	0.0	chr22	21001558	21001648	(29816820)	C	MIR	SINE/MIR	(126)	136	39	2434375
1392	7.7	0.0	0.6	chr22	21002626	21002808	(29815660)	C	AluYh3	SINE/Alu	(0)	311	130	2434376
410	30.8	7.1	5.2	chr22	21014709	21014996	(29803472)	+	L2b	LINE/L2	3035	3328	(47)	2434397
13	21.4	8.6	3.4	chr22	21025894	21025974	(29792494)	+	(GGCA)n	Simple_repeat	1	88	(0)	2434419
1958	18.2	6.8	1.8	chr22	21037711	21038101	(29780367)	C	LTR24	LTR/ERV1	(33)	434	17	2434434
2040	13.7	0.3	0.0	chr22	21038102	21038393	(29780075)	+	AluJr	SINE/Alu	9	301	(11)	2434436
16	10.1	2.9	2.9	chr22	21468148	21468181	(29350287)	+	(GCA)n	Simple_repeat	1	35	(0)	2435227
2232	10.5	0.0	0.7	chr22	21555341	21555636	(29262832)	+	AluSx	SINE/Alu	1	294	(18)	2435408
364	30.5	12.9	5.0	chr22	21566600	21566848	(29251620)	+	L2b	LINE/L2	2822	3122	(253)	2435437
569	25.9	7.5	3.4	chr22	21566846	21567049	(29251419)	+	MIRb	SINE/MIR	29	241	(27)	2435440
2181	9.8	0.0	0.0	chr22	21567166	21567462	(29251006)	C	AluSx3	SINE/Alu	(14)	297	1	2435441
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
2238	9.8	0.0	0.0	chr22	21576971	21577267	(29241201)	C	AluY	SINE/Alu	(14)	297	1	2435459
2164	10.1	0.3	1.9	chr22	21577268	21577404	(29241064)	C	AluSx	SINE/Alu	(178)	134	1	2435458
731	10.3	0.0	0.0	chr22	21606348	21606444	(29212024)	C	AluSx3	SINE/Alu	(40)	271	175	2435523
1469	18.6	2.3	0.0	chr22	21606573	21606830	(29211638)	+	AluJb	SINE/Alu	1	264	(48)	2435524
442	25.7	4.2	5.6	chr22	21677895	21678170	(29140298)	C	L2a	LINE/L2	(305)	3121	2846	2435675
318	23.8	18.7	0.0	chr22	21696052	21696173	(29122295)	+	MER5A	DNA/hAT-Charlie	14	163	(26)	2435701
2512	4.2	0.0	0.7	chr22	21774432	21774739	(29043729)	+	AluY	SINE/Alu	1	306	(5)	2435853
2198	8.0	0.0	0.7	chr22	21775785	21776083	(29042385)	C	AluSx3	SINE/Alu	(14)	297	1	2435855
1580	17.5	0.0	0.4	chr22	21893066	21893317	(28925151)	+	AluJb	SINE/Alu	24	274	(38)	2436157
2169	8.6	2.5	0.0	chr22	21893319	21893596	(28924872)	C	AluSp	SINE/Alu	(27)	286	1	2436158
2016	13.7	0.0	1.0	chr22	21918716	21919014	(28899454)	C	AluJo	SINE/Alu	(16)	296	1	2436223
186	28.0	3.8	9.9	chr22	21966981	21967091	(28851377)	+	MamSINE1	SINE/tRNA-RTE	38	141	(149)	2436283
2166	12.9	0.3	0.0	chr22	22014098	22014391	(28804077)	+	AluSx	SINE/Alu	1	295	(17)	2436381
3878	16.9	1.5	8.2	chr22	22014392	22014532	(28803936)	+	L1MB4	LINE/L1	4785	4922	(1399)	2436371
1147	16.2	13.7	7.3	chr22	22014533	22014804	(28803664)	+	AluJo	SINE/Alu	1	292	(20)	2436382
2988	25.2	4.9	3.9	chr22	22092888	22094050	(28724418)	+	L1MA6	LINE/L1	5094	6273	(27)	2436466
2222	17.8	6.3	0.2	chr22	22297250	22297738	(28520730)	C	REP522	Satellite/telo	(0)	1817	1297	2436728
1352	16.5	20.2	0.0	chr22	22297741	22298189	(28520279)	C	TAR1	Satellite/telo	(244)	1867	1305	2436729
11	21.0	2.5	2.4	chr22	22404791	22404830	(28413638)	+	(CTGCAG)n	Simple_repeat	1	41	(0)	2436823
11	20.1	2.9	0.0	chr22	22421798	22421831	(28396637)	+	(TTTTGG)n	Simple_repeat	1	35	(0)	2436837
711	19.7	0.8	0.0	chr22	22648948	22649064	(28169404)	C	AluJr	SINE/Alu	(194)	118	1	2437222
194	28.7	9.0	1.0	chr22	22649101	22649202	(28169266)	C	MIRc	SINE/MIR	(119)	149	39	2437223
6768	11.6	0.6	1.0	chr22	22649348	22650319	(28168149)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2437224
418	28.8	7.8	10.2	chr22	22903984	22904327	(27914141)	C	L1MC5	LINE/L1	(960)	8344	8010	2437527
3581	13.4	3.1	3.0	chr22	29152776	29153407	(21665061)	C	MER41B	LTR/ERV1	(38)	596	1	2449979
1353	20.8	0.0	4.0	chr22	29153408	29153657	(21664811)	C	AluJb	SINE/Alu	(71)	241	2	2449978
2730	9.9	4.7	4.7	chr22	29939781	29940004	(20878464)	+	LTR7B	LTR/ERV1	1	235	(229)	2451683
2373	5.4	0.0	0.4	chr22	29940005	29940281	(20878187)	+	AluY	SINE/Alu	20	295	(16)	2451684
236	28.1	0.5	1.1	chr22	35195204	35195816	(15622652)	+	(AT)n	Simple_repeat	1	616	(0)	2462452
2875	15.6	12.1	0.2	chr22	40814035	40814665	(10003803)	+	LTR62	LTR/ERVL	1	709	(0)	2474419
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
184	28.1	9.5	0.0	chr3	4493834	4493890	(193801669)	C	OldhAT1	DNA/hAT-Ac	(1409)	1439	1377	2499110
380	25.4	5.1	0.8	chr3	4976236	4976366	(193319193)	+	MER91C	DNA/hAT-Tip100	1	137	(3)	2499889
6735	7.8	4.4	1.0	chr3	5081627	5082560	(193212999)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2500157
14	23.7	4.9	4.7	chr3	5187564	5187644	(193107915)	+	G-rich	Low_complexity	1	85	(0)	2500375
355	38.4	0.0	0.8	chr3	5429394	5429519	(192866040)	+	MIR	SINE/MIR	5	129	(133)	2500806
2054	14.6	6.6	3.1	chr3	8356169	8356656	(189938903)	+	MLT2A2	LTR/ERVL	22	554	(0)	2505218
1806	23.1	6.9	8.1	chr3	8356901	8356980	(189938579)	+	MER41E	LTR/ERV1	1	57	(538)	2505220
2241	10.7	0.0	2.6	chr3	8356981	8357288	(189938271)	+	AluSx1	SINE/Alu	1	300	(12)	2505221
7208	6.1	0.4	0.0	chr3	9643307	9644375	(188651184)	+	L1PA6	LINE/L1	5080	6151	(3)	2507655
439	15.7	2.8	0.0	chr3	9644392	9644461	(188651098)	C	LTR8	LTR/ERV1	(619)	72	1	2507633
880	16.7	2.7	0.0	chr3	9644468	9644647	(188650912)	+	L1ME1	LINE/L1	5254	5438	(735)	2507656
2402	7.7	0.0	2.6	chr3	9646176	9646486	(188649073)	C	AluY	SINE/Alu	(8)	303	1	2507663
1509	17.0	4.5	9.8	chr3	9646487	9646561	(188648998)	C	LTR54	LTR/ERV1	(184)	326	259	2507660
2144	12.6	0.0	4.0	chr3	9646562	9646886	(188648673)	+	AluSx	SINE/Alu	1	312	(0)	2507664
250	32.6	11.5	0.0	chr3	12953829	12953966	(185341593)	+	MIRc	SINE/MIR	110	265	(3)	2514359
326	30.7	9.5	0.7	chr3	12984330	12984483	(185311076)	C	MER91A	DNA/hAT-Tip100	(17)	179	11	2514415
308	21.9	11.0	0.9	chr3	12995200	12995305	(185300254)	+	MIR3	SINE/MIR	5	122	(86)	2514434
295	33.6	5.7	5.0	chr3	12999058	12999241	(185296318)	+	MIR3	SINE/MIR	4	187	(21)	2514445
232	31.6	4.9	0.2	chr3	12999257	12999387	(185296172)	+	L3b	LINE/CR1	3897	3991	(108)	2514446
746	32.9	4.6	3.3	chr3	13231764	13232191	(185063368)	+	MER20B	DNA/hAT-Charlie	311	744	(39)	2514870
3024	5.7	2.3	3.9	chr3	14272354	14272791	(184022768)	C	LTR7	LTR/ERV1	(19)	431	1	2516579
1332	16.9	0.4	4.8	chr3	14272796	14272844	(184022715)	C	AluJb	SINE/Alu	(75)	237	194	2516578
6412	12.1	1.4	1.3	chr3	14272845	14273811	(184021748)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	2516580
282	22.8	8.0	7.9	chr3	15064479	15064648	(183230911)	+	MIR	SINE/MIR	60	246	(22)	2518110
2608	20.7	2.6	2.4	chr3	15381211	15381750	(182913809)	C	MER87	LTR/ERV1	(0)	541	1	2518719
486	22.5	15.1	7.1	chr3	15381751	15381771	(182913788)	C	MER58A	DNA/hAT-Charlie	(203)	21	1	2518718
468	25.3	2.5	3.1	chr3	15381773	15381935	(182913624)	C	L1ME4a	LINE/L1	(376)	5748	5587	2518716
173	37.6	0.0	2.3	chr3	15591846	15592544	(182703015)	+	(AT)n	Simple_repeat	1	699	(0)	2519110
237	24.4	27.2	1.9	chr3	23921216	23921428	(174374131)	+	L2	LINE/L2	2744	3030	(389)	2531004
2349	10.1	1.7	0.0	chr3	32048311	32048606	(166246953)	C	AluSq2	SINE/Alu	(12)	301	1	2543117
4543	12.1	2.0	0.8	chr3	32048690	32049315	(166246244)	+	MER41B	LTR/ERV1	1	634	(0)	2543118
30808	10.3	2.6	2.0	chr3	32055484	32056738	(166238821)	+	MER41-int	LTR/ERV1	4668	5944	(2)	2543118
3965	12.6	4.7	1.9	chr3	32056739	32057354	(166238205)	+	MER41B	LTR/ERV1	1	634	(0)	2543118
17956	14.9	3.8	3.6	chr3	36923611	36925588	(161369971)	+	MER83A-int	LTR/ERV1	12	1994	(2291)	2550645
4356	11.4	1.7	0.5	chr3	37823987	37824612	(160470947)	C	MER41B	LTR/ERV1	(0)	634	1	2552134
312	31.5	5.2	4.2	chr3	37824613	37824737	(160470822)	C	L1MEd	LINE/L1	(2902)	3417	3293	2552133
34	29.6	1.4	3.3	chr3	37999041	37999188	(160296371)	+	(GGCGG)n	Simple_repeat	1	150	(0)	2552384
2882	5.0	17.2	0.0	chr3	39586489	39586872	(158708687)	C	LTR7B	LTR/ERV1	(0)	464	1	2554755
7360	9.1	0.8	0.3	chr3	42811191	42812187	(155483372)	+	LTR5B	LTR/ERVK	1	1002	(0)	2559698
521	18.9	5.4	0.9	chr3	43584248	43584354	(154711205)	+	LTR18B	LTR/ERVL	1	112	(502)	2560826
1592	12.0	11.6	0.3	chr3	43584379	43584670	(154710889)	+	LTR18B	LTR/ERVL	286	614	(0)	2560826
521	27.9	2.4	5.5	chr3	43622605	43622858	(154672701)	+	L2a	LINE/L2	2996	3241	(185)	2560883
812	12.2	0.0	0.0	chr3	43688404	43688526	(154607033)	+	LTR47B3	LTR/ERVL	1	123	(329)	2560991
234	10.5	9.5	0.0	chr3	44437872	44437909	(153857650)	C	MER41C	LTR/ERV1	(0)	521	480	2562099
892	8.2	0.0	0.0	chr3	44437901	44438010	(153857549)	C	MER41C	LTR/ERV1	(411)	110	1	2562099
366	11.3	0.0	0.0	chr3	44438012	44438064	(153857495)	C	MER41A	LTR/ERV1	(580)	54	2	2562097
4308	8.9	3.0	2.7	chr3	44441213	44441528	(153854031)	C	MER41B	LTR/ERV1	(320)	314	1	2562107
288	25.4	6.3	6.9	chr3	44441529	44441540	(153854019)	C	L1ME3G	LINE/L1	(445)	479	468	2562106
208	34.8	2.8	0.0	chr3	44441542	44441610	(153853949)	C	MIRc	SINE/MIR	(129)	139	69	2562109
2204	8.1	2.6	0.7	chr3	44510973	44511269	(153784290)	+	AluSc8	SINE/Alu	1	303	(8)	2562224
5739	5.7	1.0	0.0	chr3	45053730	45054413	(153241146)	C	LTR8	LTR/ERV1	(0)	691	1	2563131
321	2.6	0.0	0.0	chr3	45061246	45061284	(153234275)	+	MER4C	LTR/ERV1	1	39	(426)	2563146
3845	11.1	0.7	2.0	chr3	45061285	45061704	(153233855)	+	MER41A	LTR/ERV1	1	415	(139)	2563147
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
908	25.9	8.8	6.6	chr3	45553313	45553721	(152741838)	C	MLT1J1	LTR/ERVL-MaLR	(25)	419	1	2564029
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
240	27.1	9.4	2.0	chr3	46235401	46235498	(152060061)	C	MIR	SINE/MIR	(40)	222	117	2565089
4648	12.2	2.1	1.1	chr3	46235595	46236296	(152059263)	+	LTR62	LTR/ERVL	1	709	(0)	2565090
15503	11.9	1.7	0.1	chr3	46427012	46429266	(151866293)	+	HERVK3-int	LTR/ERVK	1	2293	(4909)	2565375
3581	7.5	3.3	0.2	chr3	46433164	46433630	(151861929)	+	LTR3A	LTR/ERVK	3	484	(0)	2565375
15	26.8	0.0	0.0	chr3	47163892	47163936	(151131623)	+	(CTGCGG)n	Simple_repeat	1	45	(0)	2566541
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
1736	15.7	18.1	1.7	chr3	53354817	53355238	(144940321)	C	LTR54	LTR/ERV1	(3)	507	1	2577507
533	34.3	1.0	6.9	chr3	53355239	53355353	(144940206)	+	L2a	LINE/L2	3014	3117	(309)	2577506
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
52313	17.9	1.7	1.8	chr3	101632600	101641508	(96654051)	+	HERVS71-int	LTR/ERV1	4	8909	(69)	2643354
3707	12.2	3.0	0.2	chr3	101641509	101642056	(96653503)	+	LTR6A	LTR/ERV1	1	564	(0)	2643355
712	20.8	2.6	7.5	chr3	101643829	101643989	(96651570)	+	L1M5	LINE/L1	5608	5760	(483)	2643340
4184	11.3	3.8	0.8	chr3	101643990	101644474	(96651085)	+	MER41B	LTR/ERV1	1	508	(126)	2643360
1543	15.7	4.8	2.1	chr3	125628194	125628519	(72667040)	C	LTR7B	LTR/ERV1	(0)	464	130	2677438
651	27.6	7.6	4.1	chr3	126200416	126200706	(72094853)	C	MER57C2	LTR/ERV1	(0)	434	84	2678240
411	17.2	11.6	0.0	chr3	126200711	126200809	(72094750)	C	LTR54	LTR/ERV1	(396)	114	3	2678241
1839	17.2	0.0	0.3	chr3	135513179	135513504	(62782055)	+	HUERS-P1-int	LTR/ERV1	5939	6263	(0)	2692971
3438	11.4	4.6	2.1	chr3	135513505	135514076	(62781483)	+	LTR8	LTR/ERV1	1	587	(104)	2692971
1737	16.7	0.0	4.4	chr3	138863851	138864022	(59431537)	C	AluJo	SINE/Alu	(7)	305	144	2698357
1732	11.2	6.2	7.1	chr3	138864023	138864174	(59431385)	C	AluSx1	SINE/Alu	(17)	295	144	2698358
3869	18.2	3.3	4.6	chr3	143084616	143085413	(55210146)	C	MER54A	LTR/ERVL	(126)	775	1	2705164
405	25.2	6.1	4.5	chr3	143307868	143307979	(54987580)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2705502
347	29.7	4.1	2.9	chr3	143308156	143308219	(54987340)	+	MIR	SINE/MIR	84	148	(114)	2705503
4040	14.2	0.9	0.8	chr3	155076515	155077147	(43218412)	C	MER41B	LTR/ERV1	(0)	634	1	2722010
266	34.1	0.0	5.0	chr3	155077148	155077214	(43218345)	C	L1ME3E	LINE/L1	(6923)	353	288	2722003
428	25.4	10.8	3.4	chr3	177358979	177359157	(20936402)	C	MIRb	SINE/MIR	(70)	198	5	2753123
2314	26.5	7.8	1.2	chr3	184522981	184524299	(13771260)	+	L1ME4a	LINE/L1	4405	5818	(305)	2764816
15	7.2	3.2	3.1	chr3	194003708	194003738	(4291821)	+	(CCTGGG)n	Simple_repeat	1	32	(0)	2780352
184	36.5	0.0	0.0	chr3	194070556	194070629	(4224930)	+	MIR3	SINE/MIR	50	123	(85)	2780481
939	15.4	0.6	5.1	chr3	195161940	195162114	(3133445)	+	AluJb	SINE/Alu	134	300	(12)	2782457
380	22.2	13.1	2.3	chr3	195162117	195162245	(3133314)	C	MIRb	SINE/MIR	(118)	150	6	2782458
289	25.8	6.7	0.0	chr3	195692104	195692200	(2603359)	C	MER3	DNA/hAT-Charlie	(105)	104	1	2783488
3297	14.7	12.3	2.1	chr3	196337312	196337931	(1957628)	+	MER50	LTR/ERV1	20	711	(23)	2784802
181	34.6	10.5	2.2	chr3	196337961	196338099	(1957460)	C	L2c	LINE/L2	(179)	3208	3057	2784800
3448	12.3	11.4	1.4	chr3	196842744	196843192	(1452367)	C	MER41B	LTR/ERV1	(124)	510	1	2785874
2252	24.8	3.7	4.0	chr3	196843223	196843275	(1452284)	C	LTR82A	LTR/ERVL	(0)	872	833	2785876
1823	14.7	4.2	0.0	chr3	196843276	196843568	(1451991)	C	AluJb	SINE/Alu	(4)	308	3	2785877
14	21.8	5.3	5.0	chr4	932006	932081	(189282474)	+	(CCGCAG)n	Simple_repeat	1	80	(0)	2789688
7969	6.3	23.6	0.1	chr4	6672541	6673747	(183540808)	+	LTR12C	LTR/ERV1	2	1579	(0)	2798852
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
993	15.4	10.5	3.2	chr4	10183427	10183647	(180030908)	C	L1PA15	LINE/L1	(489)	5671	5433	2804254
187	31.2	4.9	1.3	chr4	40238028	40238105	(149976450)	C	MIRc	SINE/MIR	(61)	207	127	2851556
2718	13.4	10.4	4.4	chr4	55742770	55743339	(134471216)	+	LTR18B	LTR/ERVL	1	608	(6)	2871395
682	31.2	17.5	2.8	chr4	56511774	56512412	(133702143)	+	L2	LINE/L2	2215	2967	(452)	2872732
2372	9.8	0.3	0.7	chr4	56512536	56512840	(133701715)	C	AluSx	SINE/Alu	(8)	304	1	2872733
821	21.3	0.0	6.5	chr4	56700612	56700797	(133513758)	+	MLT1J	LTR/ERVL-MaLR	109	282	(230)	2873088
4347	13.4	0.0	1.9	chr4	56700861	56701506	(133513049)	+	MER41B	LTR/ERV1	1	634	(0)	2873092
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
3992	10.3	0.4	1.1	chr4	74096175	74096724	(116117831)	C	MER41B	LTR/ERV1	(88)	546	1	2895701
3111	8.4	0.4	11.3	chr4	75910807	75911327	(114303228)	C	LTR7B	LTR/ERV1	(0)	464	1	2898369
194	33.3	0.0	0.0	chr4	78691832	78691882	(111522673)	C	L2c	LINE/L2	(46)	3341	3291	2902571
219	34.4	4.3	7.1	chr4	78691909	78692077	(111522478)	C	L2c	LINE/L2	(228)	3159	2996	2902571
2420	22.5	11.7	16.7	chr4	78693589	78694457	(111520098)	C	LTR8B	LTR/ERV1	(0)	820	1	2902577
1273	28.5	1.3	0.0	chr4	78694460	78694768	(111519787)	C	HUERS-P1-int	LTR/ERV1	(3)	6260	5948	2902577
3106	6.9	0.4	11.5	chr4	79696429	79696950	(110517605)	+	LTR7B	LTR/ERV1	1	464	(0)	2903921
2807	8.5	5.8	2.7	chr4	109784814	109785262	(80429293)	+	LTR7B	LTR/ERV1	1	464	(0)	2945529
4074	8.4	1.4	0.0	chr4	116382822	116383367	(73831188)	+	MER41A	LTR/ERV1	1	554	(0)	2954375
4509	14.2	4.4	0.7	chr4	123349123	123349802	(66864753)	C	LTR62	LTR/ERVL	(2)	707	2	2963818
2231	19.2	4.9	1.6	chr4	128565104	128565553	(61649002)	+	MER31B	LTR/ERV1	1	466	(0)	2970905
17	16.9	0.0	0.0	chr4	151038454	151038487	(39176068)	+	A-rich	Low_complexity	1	34	(0)	3000688
4232	10.5	3.8	1.0	chr4	151038612	151039227	(39175328)	+	MER41B	LTR/ERV1	1	634	(0)	3000689
1907	26.9	7.5	7.4	chr4	154444048	154445282	(35769273)	+	L2a	LINE/L2	2178	3426	(0)	3006049
1962	11.2	0.9	5.2	chr4	168976362	168976949	(21237606)	C	LTR7B	LTR/ERV1	(0)	464	1	3025587
2944	25.6	8.4	2.4	chr4	183348376	183348835	(6865720)	+	Arthur1	DNA/hAT-Tip100	1	507	(3440)	3044782
4144	13.2	2.0	0.0	chr4	183348836	183349456	(6865099)	+	MER41B	LTR/ERV1	1	634	(0)	3044783
1729	17.1	1.4	0.3	chr4	190111667	190111959	(102596)	C	HERVK-int	LTR/ERVK	(6840)	696	401	3054629
1218	8.2	0.0	0.0	chr4	190111960	190112106	(102449)	+	AluYh3	SINE/Alu	136	282	(29)	3054630
421	15.2	0.0	0.0	chr5	5523237	5523302	(176014957)	+	MER41C	LTR/ERV1	1	66	(455)	3060644
326	9.5	0.0	0.0	chr5	5523299	5523340	(176014919)	+	MER41C	LTR/ERV1	25	66	(455)	3060644
329	7.0	2.3	0.0	chr5	5523335	5523377	(176014882)	+	MER41C	LTR/ERV1	23	66	(455)	3060644
3087	15.2	1.6	0.2	chr5	5585866	5586354	(175951905)	C	MER66C	LTR/ERV1	(59)	496	1	3060714
2160	17.6	6.1	2.0	chr5	10295818	10296274	(171241985)	+	Tigger17a	DNA/TcMar-Tigger	178	654	(0)	3066635
1778	11.8	0.0	0.0	chr5	10296288	10296525	(171241734)	C	AluSx	SINE/Alu	(19)	293	56	3066636
3171	18.1	5.1	7.2	chr5	10303607	10304078	(171234181)	+	MER72	LTR/ERV1	15	494	(228)	3066651
2206	10.6	2.3	0.0	chr5	10577131	10577422	(170960837)	C	AluSq2	SINE/Alu	(14)	299	1	3067170
46	9.9	4.3	2.1	chr5	10577423	10577434	(170960825)	+	(CCTTTC)n	Simple_repeat	5	16	(0)	3067171
531	24.9	8.4	2.0	chr5	10589189	10589389	(170948870)	+	MER54A	LTR/ERVL	373	587	(314)	3067192
280	20.7	0.0	9.4	chr5	11590512	11590607	(169947652)	+	LTR7B	LTR/ERV1	180	266	(198)	3068507
1425	16.2	4.7	3.1	chr5	11590624	11590941	(169947318)	+	LTR7B	LTR/ERV1	142	464	(0)	3068508
618	25.4	1.4	0.0	chr5	16528760	16528901	(165009358)	C	MER58B	DNA/hAT-Charlie	(0)	341	198	3075127
4205	13.4	1.1	0.0	chr5	19241281	19241907	(162296352)	C	MER41B	LTR/ERV1	(0)	634	1	3079089
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
1650	17.9	0.3	2.0	chr5	40802257	40802553	(140735706)	C	AluJr4	SINE/Alu	(20)	292	1	3109441
491	28.5	8.0	10.4	chr5	40802554	40802599	(140735660)	C	Chap1_Mam	DNA/hAT-Charlie	(182)	160	124	3109440
2216	11.9	0.3	0.0	chr5	40802600	40802893	(140735366)	+	AluSp	SINE/Alu	1	295	(18)	3109442
1891	15.9	20.4	3.2	chr5	43063964	43064332	(138473927)	+	MER61D	LTR/ERV1	3	464	(37)	3112476
17642	10.2	3.5	1.2	chr5	43072721	43075264	(138462995)	C	HERVH48-int	LTR/ERV1	(4050)	2604	1	3112489
2371	8.8	0.3	0.0	chr5	69090738	69091034	(112447225)	+	AluSp	SINE/Alu	1	298	(15)	3143226
879	7.8	3.4	8.4	chr5	69091035	69091117	(112447142)	C	MER41A	LTR/ERV1	(66)	488	408	3143225
873	6.7	0.0	0.0	chr5	69091121	69091225	(112447034)	C	MER41A	LTR/ERV1	(449)	105	1	3143225
3421	7.8	2.0	0.4	chr5	69091233	69091647	(112446612)	+	LTR46	LTR/ERV1	1	422	(38)	3143227
4433	7.1	1.4	2.9	chr5	74591530	74591966	(106946293)	C	MER41A	LTR/ERV1	(109)	445	1	3152193
423	26.2	3.1	1.6	chr5	74592001	74592128	(106946131)	+	Charlie2a	DNA/hAT-Charlie	6	135	(2726)	3152195
4022	11.7	5.4	0.2	chr5	91291596	91292193	(90246066)	C	MER41B	LTR/ERV1	(0)	634	4	3175966
488	30.1	28.9	4.4	chr5	91292194	91292535	(90245724)	C	MamGypLTR2c	LTR/Gypsy	(575)	493	61	3175965
4249	4.9	1.6	0.2	chr5	95707337	95707886	(85830373)	C	LTR6B	LTR/ERV1	(0)	558	1	3181553
2278	8.3	0.9	0.0	chr5	95707887	95708199	(85830060)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	3181554
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
3909	9.7	1.4	0.0	chr5	96808822	96809367	(84728892)	C	MER41A	LTR/ERV1	(0)	554	1	3183135
817	17.8	4.5	1.7	chr5	103057143	103057314	(78480945)	C	MER57A-int	LTR/ERV1	(5174)	1013	837	3190904
2326	11.9	0.1	2.6	chr5	103057315	103057717	(78480542)	+	MER41A	LTR/ERV1	1	436	(198)	3190911
1042	25.0	4.2	3.2	chr5	108531424	108532124	(73006135)	+	MER61E	LTR/ERV1	1	728	(0)	3197775
3147	11.1	2.4	3.5	chr5	109424300	109424550	(72113709)	+	MER84	LTR/ERV1	146	401	(106)	3198972
4798	11.8	0.0	1.7	chr5	109424551	109425251	(72113008)	+	LTR8	LTR/ERV1	1	689	(2)	3198974
5875	14.7	1.2	2.9	chr5	112547994	112548932	(68989327)	+	MER49	LTR/ERV1	1	923	(0)	3202895
507	30.4	6.1	7.5	chr5	120512684	120513233	(61025026)	C	MER41E	LTR/ERV1	(23)	572	117	3213605
1800	9.7	2.1	2.8	chr5	126667096	126667383	(54870876)	C	LTR7B	LTR/ERV1	(38)	426	141	3221674
771	7.6	0.0	6.3	chr5	126667409	126667534	(54870725)	C	LTR7B	LTR/ERV1	(184)	280	163	3221675
1476	10.8	7.5	4.8	chr5	126667544	126667814	(54870445)	C	LTR7B	LTR/ERV1	(184)	280	2	3221676
18	18.5	0.0	2.2	chr5	131164481	131164525	(50373734)	+	G-rich	Low_complexity	1	45	(0)	3227448
1469	14.4	1.1	2.5	chr5	131571880	131572163	(49966096)	+	LTR7B	LTR/ERV1	185	464	(0)	3228182
293	21.7	3.6	6.2	chr5	131581756	131581868	(49956391)	+	LTR7Y	LTR/ERV1	179	288	(184)	3228184
1440	15.7	1.1	3.4	chr5	131581890	131582180	(49956079)	+	LTR7B	LTR/ERV1	181	464	(0)	3228185
3418	15.3	2.9	0.7	chr5	132666872	132667416	(48870843)	+	MER41D	LTR/ERV1	1	557	(0)	3229728
320	24.9	4.1	0.7	chr5	132867107	132867263	(48670996)	C	MIRb	SINE/MIR	(21)	247	87	3230055
299	27.8	14.2	1.2	chr5	138470322	138470492	(43067767)	C	L2c	LINE/L2	(104)	3283	3087	3238924
13	31.0	4.2	0.0	chr5	139661504	139661574	(41876685)	+	(CAGGCA)n	Simple_repeat	1	74	(0)	3241266
21	29.8	1.3	1.2	chr5	140402111	140402189	(41136070)	+	(GGC)n	Simple_repeat	1	80	(0)	3242550
18	13.7	0.0	0.0	chr5	143139196	143139227	(38399032)	+	(TAA)n	Simple_repeat	1	32	(0)	3247227
343	24.7	0.0	2.1	chr5	143219751	143219845	(38318414)	C	MER5B	DNA/hAT-Charlie	(50)	128	36	3247331
14	19.4	2.3	2.3	chr5	145835254	145835296	(35702963)	+	(CCGCGCG)n	Simple_repeat	1	44	(0)	3251378
204	34.7	8.3	10.9	chr5	149344959	149345307	(32192952)	+	L2b	LINE/L2	2994	3332	(43)	3257530
197	28.6	9.5	3.7	chr5	154653888	154653996	(26884263)	C	MIR3	SINE/MIR	(77)	131	16	3267691
693	11.2	0.0	0.0	chr5	157278760	157278857	(24259402)	+	MER57A-int	LTR/ERV1	5798	5895	(292)	3272425
974	16.5	9.2	1.2	chr5	157278864	157279121	(24259138)	+	LTR54B	LTR/ERV1	216	496	(2)	3272426
268	24.1	11.3	4.1	chr5	163462393	163462539	(18075720)	C	MER112	DNA/hAT-Charlie	(48)	213	55	3282590
2406	9.7	0.0	0.3	chr5	163462545	163462852	(18075407)	+	AluSx1	SINE/Alu	1	307	(5)	3282591
18	26.1	1.2	5.8	chr5	177366518	177366603	(4171656)	+	(CTGT)n	Simple_repeat	1	87	(0)	3307272
12	4.5	4.0	3.9	chr5	180071843	180071867	(1466392)	+	(CGC)n	Simple_repeat	1	26	(0)	3312026
3900	16.1	10.5	9.8	chr5	181279892	181281569	(256690)	+	REP522	Satellite/telo	1	1690	(1255)	3313977
15	25.2	4.3	2.8	chr6	2245428	2245498	(168560481)	+	(GGCG)n	Simple_repeat	1	72	(0)	3317164
2158	19.1	4.5	0.0	chr6	2921153	2921592	(167884387)	C	LOR1b	LTR/ERV1	(0)	461	1	3318111
4477	7.6	0.0	0.0	chr6	3339426	3339979	(167466000)	+	MER41A	LTR/ERV1	1	554	(0)	3318757
939	21.7	12.9	2.8	chr6	3990810	3991094	(166814885)	C	LTR36	LTR/ERV1	(1)	610	293	3319765
6121	21.1	5.9	4.0	chr6	4419960	4421202	(166384777)	+	L1MCa	LINE/L1	180	1483	(5268)	3320404
14	6.7	6.1	2.9	chr6	6737884	6737916	(164068063)	+	(AGCAA)n	Simple_repeat	1	35	(0)	3323829
18	22.7	1.7	3.3	chr6	8435410	8435469	(162370510)	+	(CTC)n	Simple_repeat	1	61	(0)	3326721
393	32.2	6.6	3.4	chr6	10662183	10662301	(160143678)	+	L2	LINE/L2	2497	2622	(797)	3329952
3572	13.7	4.6	4.4	chr6	10662302	10662484	(160143495)	+	MER41B	LTR/ERV1	1	175	(459)	3329953
1969	14.0	0.7	1.3	chr6	10662485	10662784	(160143195)	+	AluSz	SINE/Alu	1	298	(14)	3329954
476	28.4	15.1	2.5	chr6	13360883	13361084	(157444895)	+	MIR	SINE/MIR	2	233	(35)	3334122
758	23.0	39.6	4.4	chr6	14711369	14711695	(156094284)	C	L2a	LINE/L2	(545)	2874	2408	3336430
2089	12.1	1.1	0.0	chr6	14711696	14711975	(156094004)	+	AluSx1	SINE/Alu	20	302	(10)	3336432
285	20.3	9.2	0.0	chr6	14932402	14932470	(155873509)	C	MER34A1	LTR/ERV1	(492)	79	4	3336790
219	31.5	1.4	1.4	chr6	14932706	14932779	(155873200)	+	LFSINE_Vert	SINE/tRNA	377	450	(9)	3336795
4358	13.3	2.0	0.6	chr6	15554466	15555169	(155250810)	C	MER72	LTR/ERV1	(0)	722	9	3338067
7743	12.0	1.4	2.3	chr6	15560382	15561652	(155244327)	+	MER41-int	LTR/ERV1	4688	5946	(0)	3338068
3997	14.3	1.4	1.9	chr6	15561654	15562289	(155243690)	+	MER41B	LTR/ERV1	2	634	(0)	3338068
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
3945	13.5	3.6	6.5	chr6	15904250	15904961	(154901018)	C	LTR8	LTR/ERV1	(0)	691	1	3338657
337	24.7	0.0	1.2	chr6	16031246	16031331	(154774648)	+	MER61E	LTR/ERV1	1	85	(484)	3338877
248	15.4	0.0	5.5	chr6	16031311	16031365	(154774614)	+	LTR9D	LTR/ERV1	104	155	(490)	3338878
2444	19.0	3.0	4.1	chr6	16031415	16031909	(154774070)	+	MER61E	LTR/ERV1	85	531	(38)	3338877
2280	13.5	7.4	0.3	chr6	16044129	16044507	(154761472)	C	LTR47A	LTR/ERVL	(42)	410	3	3338899
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
2133	13.9	0.7	0.0	chr6	16214180	16214489	(154591490)	C	AluSx1	SINE/Alu	(0)	312	1	3339168
1060	16.1	0.5	11.1	chr6	16214490	16214666	(154591313)	C	LTR8	LTR/ERV1	(522)	169	1	3339167
452	27.8	12.2	2.4	chr6	16214672	16214832	(154591147)	+	Charlie2b	DNA/hAT-Charlie	2457	2647	(135)	3339169
3387	14.0	11.9	1.6	chr6	16265461	16266134	(154539845)	+	LTR12	LTR/ERV1	1	753	(73)	3339250
2325	6.4	0.7	3.0	chr6	16267082	16267379	(154538600)	+	AluYk2	SINE/Alu	1	291	(20)	3339253
2237	7.0	3.7	1.9	chr6	16267380	16267699	(154538280)	+	LTR12_	LTR/ERV1	363	688	(0)	3339254
1044	20.2	7.3	1.1	chr6	19999731	20000000	(150805979)	+	MLT1J1	LTR/ERVL-MaLR	1	288	(156)	3345231
371	21.1	3.8	0.0	chr6	20000079	20000154	(150805825)	+	MLT1J1	LTR/ERVL-MaLR	341	419	(25)	3345232
4268	9.2	1.6	0.0	chr6	20188405	20188960	(150617019)	C	MER61E	LTR/ERV1	(4)	565	1	3345560
4361	10.9	1.6	0.5	chr6	24756192	24756815	(146049164)	C	MER41B	LTR/ERV1	(0)	634	4	3352489
242	36.2	5.0	9.2	chr6	24756816	24756900	(146049079)	C	L3	LINE/CR1	(1506)	2593	2522	3352486
26	0.0	0.0	0.0	chr6	24756901	24756925	(146049054)	+	(T)n	Simple_repeat	1	25	(0)	3352490
2493	8.4	12.3	0.8	chr6	26028814	26029209	(144776770)	C	LTR7	LTR/ERV1	(2)	448	1	3354514
1499	23.8	9.0	6.9	chr6	26029259	26029778	(144776201)	C	MER34	LTR/ERV1	(0)	542	11	3354515
2091	12.8	0.7	0.0	chr6	26195901	26196196	(144609783)	C	AluSx	SINE/Alu	(14)	298	1	3354811
408	29.1	2.5	10.2	chr6	26196197	26196263	(144609716)	+	FRAM	SINE/Alu	104	162	(4)	3354810
2022	11.5	0.3	0.7	chr6	26214857	26215143	(144590836)	C	AluSq2	SINE/Alu	(27)	286	1	3354839
2479	18.4	0.5	0.2	chr6	26295852	26296266	(144509713)	C	LTR3	LTR/ERVK	(16)	416	1	3354957
300	15.4	0.0	0.0	chr6	26520451	26520502	(144285477)	C	L1ME3A	LINE/L1	(3)	6170	6119	3355395
4115	12.1	6.3	0.3	chr6	27135841	27136436	(143669543)	C	MER41B	LTR/ERV1	(0)	634	1	3356348
229	32.4	8.5	0.0	chr6	27136437	27136507	(143669472)	C	L2	LINE/L2	(800)	2619	2543	3356347
556	23.8	7.4	1.0	chr6	27252055	27252249	(143553730)	+	MIRb	SINE/MIR	26	243	(25)	3356581
3398	7.0	1.4	0.0	chr6	27633163	27633590	(143172389)	+	LTR3B	LTR/ERVK	1	434	(3)	3357262
513	21.9	13.4	0.0	chr6	27809573	27809759	(142996220)	+	MER33	DNA/hAT-Charlie	1	216	(108)	3357634
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
322	11.1	0.0	0.0	chr6	28000466	28000510	(142805469)	C	MER41G	LTR/ERV1	(0)	885	841	3357942
2309	14.9	16.0	3.7	chr6	28000512	28001046	(142804933)	+	LTR18B	LTR/ERVL	2	614	(0)	3357943
4976	14.1	3.2	2.2	chr6	28220221	28221124	(142584855)	C	MER49	LTR/ERV1	(8)	915	3	3358273
12	19.9	2.3	4.4	chr6	28267225	28267268	(142538711)	+	G-rich	Low_complexity	1	45	(0)	3358358
13	9.7	9.1	0.0	chr6	28336875	28336907	(142469072)	+	(GTTGTT)n	Simple_repeat	1	36	(0)	3358464
2522	11.9	20.7	8.3	chr6	28353865	28354395	(142451584)	C	LTR18B	LTR/ERVL	(0)	614	1	3358498
12	20.8	4.3	2.1	chr6	30685565	30685610	(140120369)	+	(TCTCTCTG)n	Simple_repeat	1	48	(0)	3362021
391	24.4	4.7	0.0	chr6	30725854	30725935	(140080044)	C	AluJb	SINE/Alu	(79)	233	148	3362088
282	21.4	6.7	4.5	chr6	30726051	30726138	(140079841)	+	MER5A	DNA/hAT-Charlie	18	107	(82)	3362089
13	17.7	3.1	0.0	chr6	31723387	31723418	(139082561)	+	(GCT)n	Simple_repeat	1	33	(0)	3363784
260	35.8	14.3	0.5	chr6	31725783	31726203	(139079776)	+	L2c	LINE/L2	2327	2815	(604)	3363787
50	0.0	0.0	0.0	chr6	31735808	31735850	(139070129)	+	(CA)n	Simple_repeat	1	43	(0)	3363796
242	25.9	13.5	9.8	chr6	31739151	31739254	(139066725)	+	L2c	LINE/L2	3289	3426	(0)	3363799
339	32.1	6.0	4.1	chr6	31794525	31794719	(139011260)	C	MIR	SINE/MIR	(10)	252	54	3363902
652	17.6	3.7	5.1	chr6	31834263	31834400	(138971579)	C	AluJb	SINE/Alu	(176)	136	1	3363975
14	10.4	3.0	2.9	chr6	31834405	31834437	(138971542)	+	(TTTTG)n	Simple_repeat	1	34	(0)	3363980
19	8.9	3.5	8.5	chr6	31902313	31902418	(138903561)	+	(CGCCCG)n	Simple_repeat	1	100	(0)	3364127
17	15.3	0.0	0.0	chr6	33276840	33276868	(137529111)	+	(T)n	Simple_repeat	1	29	(0)	3366123
3303	7.2	0.9	5.2	chr6	33879736	33880220	(136925759)	+	LTR7B	LTR/ERV1	1	464	(0)	3367267
8454	3.4	0.0	0.1	chr6	34719460	34720428	(136085551)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3369011
251	28.9	1.2	4.6	chr6	37048303	37048389	(133757590)	C	MIR3	SINE/MIR	(23)	185	102	3373813
910	26.6	1.2	2.5	chr6	37109844	37110107	(133695872)	+	MIRc	SINE/MIR	7	268	(0)	3373970
1846	10.4	3.5	5.7	chr6	37175979	37176275	(133629704)	C	AluSx1	SINE/Alu	(21)	291	2	3374142
2130	10.5	1.7	0.3	chr6	37176280	37176574	(133629405)	C	AluSz	SINE/Alu	(13)	299	1	3374143
1053	13.6	0.0	1.9	chr6	37176667	37176821	(133629158)	+	AluJr4	SINE/Alu	115	266	(46)	3374144
38	0.0	0.0	0.0	chr6	37176837	37176869	(133629110)	+	(AC)n	Simple_repeat	1	33	(0)	3374145
870	23.0	10.2	1.8	chr6	37176905	37177239	(133628740)	C	Charlie7	DNA/hAT-Charlie	(2076)	536	63	3374146
328	30.4	9.4	4.6	chr6	41938759	41938910	(128867069)	+	MIR3	SINE/MIR	38	197	(11)	3382129
247	30.3	11.0	6.8	chr6	42017426	42017659	(128788320)	+	L2c	LINE/L2	3076	3320	(67)	3382348
705	27.1	7.1	2.8	chr6	42028634	42028849	(128777130)	+	MIRb	SINE/MIR	25	250	(18)	3382374
1151	23.3	17.9	7.2	chr6	42199452	42199870	(128606109)	+	MLT1G3	LTR/ERVL-MaLR	79	577	(2)	3382776
335	21.2	0.0	0.0	chr6	42768829	42768894	(128037085)	C	MLT1O	LTR/ERVL-MaLR	(335)	207	142	3383989
244	24.4	7.9	2.4	chr6	43013389	43013472	(127792507)	C	LTR50	LTR/ERVL	(552)	243	155	3384534
22	14.9	0.0	0.0	chr6	43769692	43769738	(127036241)	+	(GT)n	Simple_repeat	1	47	(0)	3385987
279	27.1	11.3	4.1	chr6	43798586	43798708	(127007271)	C	MIR3	SINE/MIR	(27)	181	49	3386027
213	30.9	2.4	1.2	chr6	43918115	43918196	(126887783)	+	MIR	SINE/MIR	178	260	(2)	3386248
464	27.5	5.5	1.4	chr6	44224546	44224685	(126581294)	+	MIRb	SINE/MIR	63	208	(60)	3386815
22490	10.3	2.1	1.9	chr6	45291077	45296185	(125509794)	+	L1PB1	LINE/L1	1392	6509	(358)	3388414
1241	24.0	4.4	5.1	chr6	67879083	67879506	(102926473)	+	MER39	LTR/ERV1	1	603	(104)	3416014
2649	2.5	0.3	0.0	chr6	67879508	67879824	(102926155)	C	L1PA2	LINE/L1	(1119)	5027	4710	3416015
7791	1.8	0.0	0.0	chr6	67879824	67880939	(102925040)	+	L1PA2	LINE/L1	5032	6147	(8)	3416015
13473	28.8	5.7	5.1	chr6	67881437	67888662	(102917317)	C	HERVH-int	LTR/ERV1	(0)	7713	596	3416017
833	22.5	5.6	4.4	chr6	68741156	68741363	(102064616)	C	MIR	SINE/MIR	(21)	241	38	3417066
2292	7.4	1.1	0.3	chr6	73514185	73514468	(97291511)	C	AluY	SINE/Alu	(24)	287	2	3423639
957	17.0	23.6	0.0	chr6	73514470	73514693	(97291286)	C	AluSc8	SINE/Alu	(18)	293	1	3423640
1390	11.7	18.6	0.0	chr6	73514694	73514933	(97291046)	C	AluSx4	SINE/Alu	(3)	307	13	3423641
180	34.1	8.3	2.2	chr6	73564497	73564586	(97241393)	C	L2c	LINE/L2	(20)	3367	3272	3423772
3782	9.9	10.4	2.2	chr6	73564658	73565059	(97240920)	+	MER41B	LTR/ERV1	1	456	(178)	3423773
2832	6.4	2.6	17.5	chr6	80981142	80981689	(89824290)	+	LTR7B	LTR/ERV1	1	464	(0)	3433227
1716	25.0	10.1	8.6	chr6	83974325	83975082	(86830897)	C	LTR19C	LTR/ERV1	(2)	777	7	3437229
405	24.6	0.8	0.8	chr6	106887524	106887642	(63918337)	C	L2a	LINE/L2	(54)	3372	3254	3467686
1329	15.9	5.8	3.7	chr6	106887650	106887679	(63918300)	+	MER39	LTR/ERV1	1	30	(677)	3467687
4409	12.5	1.4	5.0	chr6	106887680	106887815	(63918164)	+	LTR8	LTR/ERV1	1	141	(550)	3467688
5280	14.4	2.8	6.9	chr6	110767831	110768870	(60037109)	+	L1MC2	LINE/L1	5132	6128	(216)	3474269
357	39.9	8.1	2.5	chr6	110819381	110819655	(59986324)	C	L2	LINE/L2	(723)	2696	2409	3474371
3230	16.0	3.5	2.6	chr6	110819659	110820224	(59985755)	+	MER41B	LTR/ERV1	1	571	(63)	3474373
1659	9.4	0.0	0.0	chr6	110953610	110953822	(59852157)	+	MER41-int	LTR/ERV1	5730	5942	(4)	3474704
4065	9.5	0.0	2.3	chr6	110953825	110954349	(59851630)	+	MER41B	LTR/ERV1	1	521	(113)	3474704
3041	12.6	1.9	2.6	chr6	139962977	139963467	(30842512)	+	LTR45B	LTR/ERV1	3	489	(0)	3515470
2929	6.3	0.9	16.5	chr6	142104792	142105342	(28700637)	C	LTR7B	LTR/ERV1	(0)	464	1	3518058
19	16.3	0.0	0.0	chr6	143511562	143511597	(27294382)	+	(GCA)n	Simple_repeat	1	36	(0)	3519988
2060	16.5	3.3	3.1	chr6	146854796	146855346	(23950633)	+	MLT2A2	LTR/ERVL	1	554	(0)	3524596
651	21.4	3.0	5.9	chr6	146863809	146863901	(23942078)	C	L1MC5	LINE/L1	(112)	9192	9103	3524608
4557	10.5	0.9	0.9	chr6	146887061	146887694	(23918285)	C	MER41B	LTR/ERV1	(0)	634	1	3524637
17	46.4	0.0	1.0	chr6	146902641	146902737	(23903242)	+	(AT)n	Simple_repeat	1	97	(0)	3524656
219	26.7	8.8	0.4	chr6	146915906	146916023	(23889956)	C	MIR1_Amn	SINE/MIR	(93)	175	47	3524669
265	40.7	0.0	1.8	chr6	147212697	147212806	(23593173)	+	MamRTE1	LINE/RTE-BovB	120	227	(3585)	3525103
4112	9.0	0.6	0.0	chr6	147449273	147449816	(23356163)	C	MER41A	LTR/ERV1	(7)	547	1	3525419
557	25.1	15.1	0.9	chr6	149728652	149728969	(21077010)	+	L2a	LINE/L2	2881	3245	(181)	3529035
442	22.2	1.1	1.1	chr6	157534443	157534533	(13271446)	+	LTR90A	LTR	828	918	(58)	3541066
14	21.6	4.7	0.0	chr6	157823308	157823350	(12982629)	+	(GCC)n	Simple_repeat	1	45	(0)	3541543
565	21.6	5.6	0.7	chr6	158004004	158004138	(12801841)	+	LTR87	LTR/ERVL?	480	621	(3)	3541802
4781	9.6	1.6	0.2	chr6	158004149	158004773	(12801206)	+	MER41B	LTR/ERV1	1	634	(0)	3541803
713	19.1	2.2	0.0	chr6	158214386	158214516	(12591463)	+	AluJr	SINE/Alu	152	285	(27)	3542143
36	0.0	0.0	0.0	chr6	158214517	158214550	(12591429)	+	(AAAAC)n	Simple_repeat	1	34	(0)	3542144
682	21.0	17.0	4.3	chr6	158704127	158704286	(12101693)	+	MER58B	DNA/hAT-Charlie	85	269	(72)	3542981
4256	11.2	2.5	0.3	chr6	164337813	164338432	(6467547)	+	MER41B	LTR/ERV1	1	634	(0)	3550658
1770	7.0	0.5	0.0	chr7	2757130	2757342	(156588631)	C	AluY	SINE/Alu	(6)	305	92	3561944
979	22.7	11.8	2.3	chr7	2757355	2757705	(156588268)	+	MLT1E1A	LTR/ERVL-MaLR	285	673	(7)	3561942
1017	16.4	0.0	1.3	chr7	5525180	5525338	(153820635)	C	AluJr	SINE/Alu	(19)	293	137	3567248
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
1308	19.4	3.0	2.3	chr7	7212528	7212827	(152133146)	C	LTR7B	LTR/ERV1	(0)	464	163	3570787
2800	17.8	3.2	12.9	chr7	16419266	16420033	(142925940)	+	LTR8	LTR/ERV1	1	691	(0)	3582433
800	26.6	0.0	0.0	chr7	17207506	17207682	(142138291)	C	MER45A	DNA/hAT-Tip100	(0)	178	2	3583579
3730	13.5	3.4	0.5	chr7	22179496	22180104	(137165869)	+	MER41B	LTR/ERV1	1	627	(7)	3590294
538	27.7	10.2	7.7	chr7	22302512	22302902	(137043071)	+	LTR81B	LTR/Gypsy	978	1379	(14)	3590449
2784	8.1	8.9	0.5	chr7	22708904	22709313	(136636660)	+	LTR7	LTR/ERV1	1	448	(2)	3591092
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
4644	10.4	1.3	0.5	chr7	36217012	36217640	(123128333)	C	MER41B	LTR/ERV1	(0)	634	1	3611924
2965	13.3	1.4	0.4	chr7	64666677	64667158	(94678815)	C	MER57E3	LTR/ERV1	(0)	487	1	3646565
802	16.3	0.8	0.2	chr7	74159796	74159939	(85186034)	+	LTR23	LTR/ERV1	295	437	(0)	3666355
4322	9.3	0.9	3.1	chr7	74160039	74160487	(85185486)	+	MER41B	LTR/ERV1	1	453	(181)	3666363
1996	13.5	0.3	2.4	chr7	75877218	75877513	(83468460)	+	AluSx	SINE/Alu	2	291	(21)	3670802
138	31.1	0.0	0.3	chr7	76016110	76016493	(83329480)	+	(AT)n	Simple_repeat	1	384	(0)	3671129
13	25.0	2.0	2.0	chr7	76397687	76397735	(82948238)	+	(CCCGCAG)n	Simple_repeat	1	50	(0)	3672048
4079	13.7	0.8	0.2	chr7	84821526	84822155	(74523818)	C	MER41B	LTR/ERV1	(0)	634	1	3684024
2928	17.7	0.2	6.0	chr7	84822156	84822504	(74523469)	+	L1MC3	LINE/L1	7370	7701	(84)	3684022
1746	12.4	0.7	0.0	chr7	93148693	93148966	(66197007)	+	MLT1B	LTR/ERVL-MaLR	1	276	(114)	3694873
3988	8.3	0.2	0.0	chr7	93148971	93149490	(66196483)	+	MER41C	LTR/ERV1	1	521	(0)	3694874
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
13	8.9	0.0	3.9	chr7	100430820	100430845	(58915128)	+	(CAG)n	Simple_repeat	1	26	(0)	3706566
308	28.2	6.5	8.6	chr7	103996121	103996341	(55349632)	+	L1MEd	LINE/L1	90	305	(6781)	3713474
682	23.6	5.8	1.0	chr7	103996353	103996549	(55349424)	+	MER5C1	DNA/hAT-Charlie	2	208	(55)	3713475
1160	26.6	10.3	2.2	chr7	106543381	106543791	(52802182)	C	L2a	LINE/L2	(42)	3384	2937	3717731
3059	5.4	5.0	9.8	chr7	106567353	106567841	(52778132)	+	LTR7B	LTR/ERV1	1	464	(0)	3717758
2756	7.5	15.7	0.7	chr7	106569510	106569937	(52776036)	+	LTR10F	LTR/ERV1	1	504	(7)	3717761
645	15.2	0.0	9.6	chr7	106736944	106737089	(52608884)	C	MER50B	LTR/ERV1	(565)	132	1	3717979
568	28.9	3.4	3.4	chr7	106737207	106737442	(52608531)	C	L1M4c	LINE/L1	(5905)	408	173	3717977
1528	14.5	0.4	0.0	chr7	106774310	106774544	(52571429)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	1	3718048
4321	9.3	1.3	2.8	chr7	106774627	106775270	(52570703)	C	MER41B	LTR/ERV1	(0)	634	1	3718049
4031	9.6	2.5	0.2	chr7	106796527	106796945	(52549028)	C	MER41A	LTR/ERV1	(130)	424	1	3718093
13041	9.0	2.6	0.9	chr7	106796946	106798625	(52547348)	C	MER41-int	LTR/ERV1	(2)	5944	4225	3718093
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
854	25.3	8.7	4.8	chr7	117184586	117184959	(42161014)	+	L1MD2	LINE/L1	5960	6349	(10)	3732212
3027	9.3	0.9	4.6	chr7	119838679	119839160	(39506813)	C	LTR7B	LTR/ERV1	(0)	464	1	3735638
211	37.9	6.4	3.1	chr7	120994661	120994915	(38351058)	C	L2c	LINE/L2	(400)	2987	2721	3737079
4279	19.8	2.2	1.4	chr7	121038602	121039507	(38306466)	C	L1MC3	LINE/L1	(172)	7613	6701	3737147
1373	30.4	4.7	1.8	chr7	121049106	121049597	(38296376)	C	LTR33	LTR/ERVL	(8)	507	1	3737163
303	30.5	12.3	6.6	chr7	121082572	121082799	(38263174)	C	MIRb	SINE/MIR	(19)	249	3	3737209
1865	8.9	0.4	0.0	chr7	123499753	123500000	(35845973)	+	MER41A	LTR/ERV1	1	249	(305)	3740507
4081	15.5	0.2	0.9	chr7	123992703	123993160	(35352813)	C	MER41B	LTR/ERV1	(179)	455	1	3741258
334	34.4	3.0	1.5	chr7	128476269	128476398	(30869575)	C	Tigger19b	DNA/TcMar-Tigger	(178)	372	241	3747318
1119	24.5	12.7	3.5	chr7	128734665	128735062	(30610911)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	9	3747894
672	20.9	12.2	4.0	chr7	128735069	128735423	(30610550)	+	L2a	LINE/L2	2856	3232	(194)	3747892
11	24.0	4.5	0.0	chr7	128831241	128831284	(30514689)	+	(CCTCCCG)n	Simple_repeat	1	46	(0)	3748035
256	31.5	2.4	4.1	chr7	135211094	135211262	(24134711)	+	MIR3	SINE/MIR	1	166	(42)	3758572
4398	11.1	0.3	0.9	chr7	137345641	137346278	(21999695)	C	MER41B	LTR/ERV1	(0)	634	1	3761844
1138	18.6	1.4	2.3	chr7	137346279	137346338	(21999635)	+	MER20	DNA/hAT-Charlie	160	218	(1)	3761843
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
4871	2.9	0.0	0.2	chr7	139091867	139092425	(20253548)	C	LTR6B	LTR/ERV1	(0)	558	1	3764901
1603	17.7	1.1	2.8	chr7	139111661	139111942	(20234031)	+	AluJr	SINE/Alu	1	277	(35)	3764948
128	13.8	5.2	2.0	chr7	139111946	139112231	(20233742)	+	A-rich	Low_complexity	1	301	(0)	3764949
378	35.1	11.3	3.5	chr7	143370222	143370360	(15975613)	+	L2b	LINE/L2	1858	2005	(1414)	3771820
3628	10.4	2.7	1.1	chr7	143370361	143370905	(15975068)	+	MER41A	LTR/ERV1	1	554	(0)	3771821
2074	4.2	0.0	4.6	chr7	145784671	145784929	(13561044)	+	AluY	SINE/Alu	1	247	(64)	3775075
3723	14.7	5.0	0.5	chr7	145784930	145785235	(13560738)	+	MER50B	LTR/ERV1	359	696	(1)	3775074
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
17626	18.7	1.5	1.7	chr7	149316466	149318161	(10027812)	C	L1PA17	LINE/L1	(3707)	3208	1509	3780501
733	25.5	1.4	5.0	chr7	149318261	149318479	(10027494)	C	L1PA17	LINE/L1	(6085)	1130	920	3780501
12	20.0	5.3	5.0	chr7	149873609	149873665	(9472308)	+	(CGGCG)n	Simple_repeat	1	60	(0)	3781258
204	23.1	7.1	4.4	chr7	151008345	151008412	(8337561)	C	L3b	LINE/CR1	(492)	4740	4671	3782780
343	18.4	16.3	6.4	chr7	151008469	151008578	(8337395)	C	MIRb	SINE/MIR	(22)	246	124	3782781
12	21.2	7.1	1.7	chr7	151080620	151080675	(8265298)	+	(GCCGCT)n	Simple_repeat	1	60	(0)	3782871
1751	15.5	0.0	0.0	chr7	153407218	153407475	(5938498)	C	AluSz6	SINE/Alu	(53)	259	2	3786886
987	24.0	0.9	2.2	chr7	153407477	153407698	(5938275)	C	MER58A	DNA/hAT-Charlie	(5)	219	1	3786887
2050	23.2	10.1	0.2	chr7	153408696	153409197	(5936776)	+	MLT1F1	LTR/ERVL-MaLR	1	557	(12)	3786890
4089	5.9	1.7	0.4	chr7	154676662	154677185	(4668788)	C	HERV1_LTRd	LTR/ERV1	(4)	531	1	3788600
35319	18.8	4.1	4.9	chr7	154925107	154928743	(4417230)	C	ERV24B_Prim-int	LTR/ERV1	(1815)	3679	23	3788913
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
1906	16.2	14.9	0.8	chr7	156034373	156034739	(3311234)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3790395
4057	26.5	3.9	3.7	chr7	156034740	156034813	(3311160)	+	L1M5	LINE/L1	5033	5113	(1033)	3790393
256	19.0	12.1	1.7	chr7	158696055	158696113	(649860)	C	MLT1H1	LTR/ERVL-MaLR	(15)	580	515	3793557
377	23.2	24.8	1.3	chr7	158696245	158696401	(649572)	C	MLT1H1	LTR/ERVL-MaLR	(292)	263	58	3793557
495	32.4	11.1	6.3	chr7	158865205	158865760	(480213)	C	L4_C_Mam	LINE/RTE-X	(4360)	778	193	3793814
196	27.7	9.8	7.5	chr7	159197235	159197394	(148579)	+	L2b	LINE/L2	3028	3191	(184)	3794189
306	34.4	6.8	3.5	chr8	1760112	1760310	(143378326)	+	MIR	SINE/MIR	53	258	(4)	3796053
38	28.8	2.5	3.1	chr8	6745948	6746104	(138392532)	+	(TTCT)n	Simple_repeat	1	161	(0)	3802531
261	12.8	4.7	7.5	chr8	6746119	6746186	(138392450)	C	7SLRNA	srpRNA	(275)	45	1	3802532
35	0.0	0.0	0.0	chr8	12559871	12559900	(132578736)	+	(AT)n	Simple_repeat	1	30	(0)	3811204
211	35.7	0.9	3.5	chr8	12559901	12560825	(132577811)	+	(GTAT)n	Simple_repeat	1	933	(0)	3811205
3222	14.8	17.1	0.3	chr8	20276169	20276886	(124861750)	+	MER21B	LTR/ERVL	1	844	(24)	3822561
4516	9.6	3.0	0.5	chr8	20276942	20277559	(124861077)	+	MER41B	LTR/ERV1	1	634	(0)	3822562
309	29.2	4.0	1.0	chr8	23458038	23458134	(121680502)	C	MIRb	SINE/MIR	(105)	163	64	3827941
14	10.6	13.2	1.7	chr8	23494338	23494390	(121644246)	+	(CAGCTGG)n	Simple_repeat	1	60	(0)	3828018
3022	16.0	2.4	0.8	chr8	28943136	28943663	(116194973)	C	MER34	LTR/ERV1	(0)	542	6	3837120
4016	13.2	3.2	0.2	chr8	29617240	29617852	(115520784)	+	MER41B	LTR/ERV1	1	632	(2)	3838219
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
439	25.6	1.5	7.9	chr8	38938202	38938341	(106200295)	C	Charlie4z	DNA/hAT-Charlie	(20)	147	17	3853242
3608	12.4	4.2	0.9	chr8	41818754	41819299	(103319337)	+	MER61E	LTR/ERV1	1	565	(4)	3857650
3654	11.8	2.5	3.0	chr8	49110428	49110995	(96027641)	+	MER61E	LTR/ERV1	1	565	(4)	3864039
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
215	33.0	12.5	0.0	chr8	63200994	63201084	(81937552)	C	L2c	LINE/L2	(6)	3381	3278	3882889
1498	22.1	1.9	8.2	chr8	67366063	67366342	(77772294)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	113	3889129
4914	8.4	0.2	1.9	chr8	67366343	67366533	(77772103)	+	MER41B	LTR/ERV1	1	190	(444)	3889130
637	24.4	7.9	5.0	chr8	91058130	91058389	(54080247)	+	L1MD2	LINE/L1	5973	6215	(144)	3922001
13	0.0	5.0	0.0	chr8	97762557	97762576	(47376060)	+	(TGTT)n	Simple_repeat	1	21	(0)	3932378
197	30.1	0.8	13.4	chr8	97762621	97762638	(47375998)	+	L2c	LINE/L2	3264	3281	(106)	3932379
4178	11.7	0.3	8.7	chr8	97762639	97763208	(47375428)	+	MER41B	LTR/ERV1	1	515	(119)	3932380
2226	12.4	12.9	0.9	chr8	100501529	100501976	(44636660)	C	LTR54	LTR/ERV1	(0)	510	1	3936907
82	16.8	2.2	2.2	chr8	100501977	100502089	(44636547)	+	GA-rich	Low_complexity	66	180	(0)	3936908
40	25.2	2.0	0.0	chr8	104691858	104691958	(40446678)	+	GA-rich	Low_complexity	1	103	(0)	3944094
248	27.4	6.4	8.6	chr8	107310759	107310886	(37827750)	+	Tigger15a	DNA/TcMar-Tigger	160	284	(431)	3947791
80	14.1	0.0	0.0	chr8	107310910	107311042	(37827594)	+	(TGTG)n	Simple_repeat	1	133	(0)	3947792
2738	14.5	10.3	4.8	chr8	110894390	110894968	(34243668)	C	LTR18B	LTR/ERVL	(0)	614	1	3952802
1115	28.7	2.9	9.5	chr8	116762220	116762651	(28375985)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	108	3960549
2229	11.4	0.0	3.2	chr8	116762652	116762967	(28375669)	+	AluSz	SINE/Alu	1	306	(6)	3960550
3193	16.2	9.5	1.0	chr8	124448843	124449422	(20689214)	C	MER51A	LTR/ERV1	(0)	634	1	3973735
1229	22.6	8.4	11.7	chr8	124449423	124449529	(20689107)	C	MER41C	LTR/ERV1	(413)	108	2	3973734
4680	7.2	0.2	0.0	chr8	124450022	124450574	(20688062)	C	MER41A	LTR/ERV1	(0)	554	1	3973736
317	26.6	8.4	5.6	chr8	128048112	128048273	(17090363)	+	L2a	LINE/L2	3210	3426	(0)	3980680
217	33.0	7.4	0.0	chr8	129992506	129992593	(15146043)	C	L2c	LINE/L2	(9)	3378	3284	3984124
272	27.3	0.0	4.9	chr8	130015235	130015315	(15123321)	C	L2a	LINE/L2	(0)	3426	3350	3984183
567	17.3	0.9	3.2	chr8	130015407	130015566	(15123070)	C	MIRc	SINE/MIR	(117)	151	4	3984184
669	29.4	7.5	2.0	chr8	134710213	134710554	(10428082)	+	MER65D	LTR/ERV1	17	423	(50)	3992723
1072	8.4	0.0	0.0	chr8	144061158	144061311	(1077325)	+	MER41A	LTR/ERV1	1	154	(400)	4007036
35	30.4	1.3	3.1	chr8	144358138	144358294	(780342)	+	G-rich	Low_complexity	1	159	(0)	4007509
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
221	24.7	10.8	1.1	chr8	144901812	144901987	(236649)	+	L2a	LINE/L2	2962	3156	(270)	4008270
2784	9.9	5.9	2.7	chr9	15379808	15380252	(123014465)	C	LTR7B	LTR/ERV1	(4)	460	1	4030427
2436	8.6	0.0	0.0	chr9	15419437	15419737	(122974980)	C	AluSx4	SINE/Alu	(9)	301	1	4030517
2400	9.2	12.9	3.6	chr9	15419738	15420038	(122974679)	C	LTR7B	LTR/ERV1	(122)	342	1	4030516
3199	7.1	0.2	11.6	chr9	35636819	35637342	(102757375)	+	LTR7B	LTR/ERV1	1	464	(0)	4059210
4217	11.5	2.7	0.2	chr9	77893076	77893693	(60501024)	+	MER41B	LTR/ERV1	1	634	(0)	4094938
3229	23.4	2.7	3.5	chr9	92173517	92174552	(46220165)	C	L1MCa	LINE/L1	(5058)	987	6	4116296
184	31.3	10.8	3.4	chr9	93116507	93116625	(45278092)	+	MIR1_Amn	SINE/MIR	31	159	(71)	4117742
4412	6.5	0.4	0.2	chr9	96420849	96421401	(41973316)	+	MER41A	LTR/ERV1	1	554	(0)	4122837
1329	19.0	4.5	6.1	chr9	96683365	96683723	(41710994)	C	MER65B	LTR/ERV1	(178)	353	1	4123321
3874	13.8	4.3	1.3	chr9	98851583	98852197	(39542520)	C	MER41B	LTR/ERV1	(0)	634	1	4127345
484	28.4	1.3	0.6	chr9	98852198	98852237	(39542480)	+	MIRb	SINE/MIR	226	264	(4)	4127344
5070	8.3	1.7	0.2	chr9	99301912	99302535	(39092182)	+	MER41B	LTR/ERV1	1	634	(0)	4128193
4578	9.2	3.6	0.2	chr9	107675390	107675999	(30718718)	C	MER41B	LTR/ERV1	(0)	634	3	4141340
549	25.8	13.2	4.3	chr9	107676000	107676185	(30718532)	C	MIR	SINE/MIR	(49)	213	1	4141339
446	28.3	7.5	3.2	chr9	110257177	110257366	(28137351)	+	MIR	SINE/MIR	64	262	(0)	4145956
1995	24.9	8.4	0.4	chr9	112224634	112225137	(26169580)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	4149408
4193	11.2	2.8	3.0	chr9	114557588	114557916	(23836801)	C	MER41B	LTR/ERV1	(290)	344	1	4153921
1994	19.3	4.4	6.4	chr9	114557917	114558081	(23836636)	C	Tigger9b	DNA/TcMar-Tigger	(315)	309	149	4153918
1038	18.6	5.7	4.4	chr9	120898004	120898095	(17496622)	C	MER33	DNA/hAT-Charlie	(186)	138	45	4165941
191	27.7	11.2	5.6	chr9	120898111	120898123	(17496594)	+	MIRc	SINE/MIR	110	122	(146)	4165943
2270	11.3	0.0	0.0	chr9	120898124	120898416	(17496301)	C	AluSx1	SINE/Alu	(19)	293	1	4165944
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
2731	9.6	0.3	1.4	chr9	124110665	124111032	(14283685)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4171952
12	26.4	5.3	5.0	chr9	125261805	125261899	(13132818)	+	(GCGGCA)n	Simple_repeat	1	100	(0)	4174297
185	26.4	10.3	3.3	chr9	127862141	127862230	(10532487)	+	MIRc	SINE/MIR	27	123	(145)	4179193
226	33.3	11.0	0.0	chr9	128202897	128203001	(10191716)	C	MIR3	SINE/MIR	(42)	166	49	4179968
189	31.5	8.2	4.3	chr9	128203040	128203053	(10191664)	+	L2	LINE/L2	22	113	(3301)	4179969
210	32.4	2.6	0.0	chr9	128203054	128203127	(10191590)	+	MIR1_Amn	SINE/MIR	91	166	(64)	4179970
180	28.4	4.5	8.0	chr9	128279068	128279160	(10115557)	C	OldhAT1	DNA/hAT-Ac	(2345)	503	415	4180124
8063	6.3	0.4	0.1	chr9	128279220	128280182	(10114535)	C	LTR13A	LTR/ERVK	(0)	966	1	4180126
317	26.0	7.7	1.0	chr9	128688587	128688683	(9706034)	C	MIR3	SINE/MIR	(57)	151	48	4181102
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
255	22.9	1.6	1.6	chr9	129488970	129489031	(8905686)	C	MIR3	SINE/MIR	(66)	142	81	4182954
310	31.4	6.3	0.8	chr9	129737623	129737683	(8657034)	+	MIRb	SINE/MIR	188	250	(18)	4183515
339	30.0	10.4	5.5	chr9	129864803	129865003	(8529714)	+	L1ME4a	LINE/L1	5908	6119	(5)	4183811
2258	11.2	0.0	0.0	chr9	129882789	129883083	(8511634)	C	AluSz	SINE/Alu	(17)	295	1	4183832
2902	16.9	5.6	1.5	chr9	129883084	129883155	(8511562)	C	MER41D	LTR/ERV1	(482)	75	5	4183831
4209	8.1	1.3	1.1	chr9	130150673	130151060	(8243657)	C	MER41A	LTR/ERV1	(166)	388	2	4184412
2111	12.2	1.6	0.3	chr9	132980895	132981196	(5413521)	C	AluSx1	SINE/Alu	(6)	306	1	4189850
3057	15.9	2.1	2.0	chr9	132981197	132981356	(5413361)	C	L1MB3	LINE/L1	(397)	5786	5625	4189849
20	7.0	3.3	0.0	chr9	133148541	133148570	(5246147)	+	(GT)n	Simple_repeat	1	31	(0)	4190137
1036	25.4	4.0	5.0	chr9	134098904	134099158	(4295559)	C	L1MC3	LINE/L1	(155)	7840	7574	4191555
1252	23.6	9.4	4.2	chr9	134099225	134099648	(4295069)	C	L1MC3	LINE/L1	(524)	7261	6814	4191555
22	24.5	1.6	8.0	chr9	136992378	136992500	(1402217)	+	(CCCGC)n	Simple_repeat	1	125	(0)	4195089
3968	10.7	2.0	0.0	chr9	137075103	137075645	(1319072)	+	MER41A	LTR/ERV1	1	554	(0)	4195198
4211	10.3	0.0	0.0	chrX	3701577	3702130	(152338765)	+	MER41A	LTR/ERV1	1	554	(0)	4365397
3677	12.3	0.3	3.4	chrX	15883108	15883485	(140157410)	C	MER41B	LTR/ERV1	(271)	363	1	4385119
1317	20.1	11.0	6.3	chrX	15883558	15883999	(140156896)	+	LTR29	LTR/ERV1	158	622	(0)	4385121
4502	9.4	3.1	0.2	chrX	40571136	40571750	(115469145)	C	MER41B	LTR/ERV1	(0)	634	1	4422746
27	8.2	0.0	0.0	chrX	40571843	40571881	(115469014)	+	(ATTC)n	Simple_repeat	1	39	(0)	4422747
2808	4.9	2.6	17.4	chrX	71264380	71264926	(84775969)	+	LTR7B	LTR/ERV1	1	464	(0)	4461156
2710	4.0	4.1	17.6	chrX	71272292	71272831	(84768064)	+	LTR7B	LTR/ERV1	1	464	(0)	4461156
1503	15.1	4.7	0.4	chrX	71365525	71365769	(84675126)	C	AluJo	SINE/Alu	(56)	256	1	4461412
788	19.4	7.0	7.0	chrX	103098300	103098543	(52942352)	C	LTR23-int	LTR/ERV1	(3927)	2260	2017	4498052
3110	18.2	3.7	12.3	chrX	103098747	103099552	(52941343)	C	MER50	LTR/ERV1	(0)	734	1	4498056
3158	4.3	0.4	17.1	chrX	109576056	109576612	(46464283)	+	LTR7B	LTR/ERV1	1	464	(0)	4507025
4126	9.9	5.8	1.3	chrX	110000728	110001332	(46039563)	C	MER41B	LTR/ERV1	(0)	634	1	4507751
464	27.0	3.0	1.7	chrX	149854117	149854311	(6186584)	C	MER34A	LTR/ERV1	(514)	273	1	4565096
16	11.7	0.0	0.0	chrX	153925915	153925942	(2114953)	+	(AAGG)n	Simple_repeat	1	28	(0)	4570953