3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
1063	10.4	0.0	0.0	chr1	1016361	1016495	(247939927)	C	AluSz	SINE/Alu	(176)	136	2	1283
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
275	30.5	4.5	0.0	chr1	11934297	11934401	(237022021)	C	MIR	SINE/MIR	(36)	226	117	18775
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
14	21.9	2.3	2.2	chr1	11934781	11934824	(237021598)	+	(TGC)n	Simple_repeat	1	45	(0)	18777
273	28.3	13.1	0.0	chr1	11934934	11935085	(237021337)	+	MIR3	SINE/MIR	13	187	(21)	18778
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
29	25.9	2.4	4.0	chr1	20787240	20787362	(228169060)	+	(CGCCGC)n	Simple_repeat	1	126	(0)	36557
2413	8.2	0.0	0.3	chr1	21787259	21787561	(227168861)	+	AluSc	SINE/Alu	1	302	(7)	38669
4430	4.9	3.0	3.9	chr1	21787562	21787800	(227168622)	C	LTR10C	LTR/ERV1	(36)	555	320	38668
2389	7.9	0.7	1.3	chr1	21787801	21788105	(227168317)	+	AluSp	SINE/Alu	1	303	(10)	38670
19	20.1	3.3	3.2	chr1	22053256	22053316	(226903106)	+	(GGCGG)n	Simple_repeat	1	63	(0)	39318
18	20.9	2.2	8.6	chr1	22053317	22053344	(226903078)	+	(GCG)n	Simple_repeat	3	93	(0)	39319
17	15.1	6.8	0.0	chr1	23168708	23168751	(225787671)	+	(CCG)n	Simple_repeat	1	47	(0)	41760
1847	10.1	5.8	0.4	chr1	23169083	23169359	(225787063)	+	AluJb	SINE/Alu	7	299	(13)	41761
16	7.1	3.1	3.0	chr1	23554882	23554913	(225401509)	+	(GAGCCA)n	Simple_repeat	1	33	(0)	42730
1193	9.7	2.3	1.9	chr1	30092571	30092777	(218863645)	C	LTR10A	LTR/ERV1	(21)	612	362	57829
258	30.0	39.9	0.0	chr1	30092797	30093004	(218863418)	+	L2	LINE/L2	2475	2765	(654)	57830
1793	23.9	7.5	0.9	chr1	30379566	30380092	(218576330)	C	LTR41	LTR/ERVL	(0)	768	205	58324
350	23.7	5.3	4.3	chr1	30380084	30380329	(218576093)	C	LTR41	LTR/ERVL	(356)	412	171	58325
1151	24.7	1.0	1.7	chr1	30380400	30380700	(218575722)	C	LTR41	LTR/ERVL	(468)	300	2	58326
26	0.0	6.2	0.0	chr1	31413154	31413185	(217543237)	+	(GGGGCC)n	Simple_repeat	1	34	(0)	60629
25	20.4	3.9	2.5	chr1	31413836	31413913	(217542509)	+	(GTCC)n	Simple_repeat	1	81	(0)	60630
3524	10.8	4.6	5.8	chr1	31457949	31458568	(217497854)	+	LTR10E	LTR/ERV1	1	612	(21)	60729
2616	27.2	4.0	6.0	chr1	31458573	31459037	(217497385)	+	HERVIP10F-int	LTR/ERV1	2	477	(7126)	60729
29	7.9	0.0	0.0	chr1	31938062	31938102	(217018320)	+	(CGG)n	Simple_repeat	1	41	(0)	61649
13	20.9	4.3	2.1	chr1	31938121	31938144	(217018278)	+	(CGGCG)n	Simple_repeat	1	46	(0)	61650
16	0.0	0.0	0.0	chr1	31938145	31938164	(217018258)	+	(CGG)n	Simple_repeat	1	20	(0)	61651
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
29	2.9	2.8	0.0	chr1	32500418	32500453	(216455969)	+	(GGGCGAGA)n	Simple_repeat	1	37	(0)	62987
15	0.0	0.0	0.0	chr1	32500491	32500509	(216455913)	+	(GGC)n	Simple_repeat	1	19	(0)	62988
14	15.6	2.1	6.1	chr1	32500510	32500535	(216455887)	+	G-rich	Low_complexity	4	49	(0)	62989
12	24.8	0.0	0.0	chr1	32500698	32500731	(216455691)	+	(CCGG)n	Simple_repeat	1	34	(0)	62990
931	25.8	4.5	3.9	chr1	32500964	32501270	(216455152)	C	L1MC4	LINE/L1	(494)	7548	7240	62991
232	30.0	2.4	0.0	chr1	33045356	33045435	(215910987)	+	MLT1L	LTR/ERVL-MaLR	118	199	(363)	64321
368	25.3	8.5	5.7	chr1	33075806	33075825	(215880597)	+	MIRc	SINE/MIR	218	235	(33)	64392
775	27.3	6.6	1.5	chr1	33076200	33076400	(215880022)	+	MIRb	SINE/MIR	43	254	(14)	64395
183	24.7	8.0	1.2	chr1	33127828	33127909	(215828513)	C	MIRb	SINE/MIR	(24)	244	157	64501
689	25.6	6.2	7.0	chr1	33127907	33128081	(215828341)	+	MIR	SINE/MIR	18	194	(68)	64502
185	29.1	17.7	4.2	chr1	33350207	33350371	(215606051)	C	MIR	SINE/MIR	(2)	260	69	64946
15	29.0	1.3	3.9	chr1	39408603	39408678	(209547744)	+	G-rich	Low_complexity	1	77	(0)	76676
14	23.4	6.8	2.5	chr1	39408911	39408920	(209547502)	+	(TCGTCC)n	Simple_repeat	1	22	(57)	76677
17	15.9	4.8	0.0	chr1	39408921	39408962	(209547460)	+	(CCCCGG)n	Simple_repeat	1	44	(0)	76678
14	23.4	6.8	2.5	chr1	39408963	39408984	(209547438)	+	(TCGTCC)n	Simple_repeat	23	79	(0)	76677
14	14.1	7.7	0.0	chr1	39409005	39409043	(209547379)	+	(GGCGC)n	Simple_repeat	1	42	(0)	76679
12	19.7	2.3	4.4	chr1	39409058	39409101	(209547321)	+	(AGCC)n	Simple_repeat	1	45	(0)	76680
812	30.8	8.0	5.4	chr1	39608769	39609191	(209347231)	C	L2a	LINE/L2	(2)	3424	2990	77049
1766	15.9	8.7	2.1	chr1	39609192	39609577	(209346845)	+	MLT2C2	LTR/ERVL	1	414	(50)	77050
597	31.6	9.3	2.5	chr1	39609599	39610208	(209346214)	C	L2a	LINE/L2	(425)	2994	2339	77049
21	11.0	0.0	2.4	chr1	39788577	39788626	(209167796)	+	(CGGCGGG)n	Simple_repeat	1	48	(0)	77402
20	29.3	0.0	2.6	chr1	39788923	39789000	(209167422)	+	G-rich	Low_complexity	1	78	(0)	77403
13	20.1	2.0	5.8	chr1	39789020	39789070	(209167352)	+	G-rich	Low_complexity	1	52	(0)	77403
468	29.6	4.3	2.5	chr1	40476821	40477024	(208479398)	+	L2a	LINE/L2	3201	3408	(18)	78878
37	2.6	0.0	0.0	chr1	40477027	40477065	(208479357)	+	(TGAA)n	Simple_repeat	1	39	(0)	78889
17	10.1	3.1	0.0	chr1	42958185	42958216	(205998206)	+	(GCCGGG)n	Simple_repeat	1	33	(0)	83430
2050	12.3	2.0	0.0	chr1	44843552	44843843	(204112579)	C	AluSx	SINE/Alu	(14)	298	1	86817
13	21.9	0.0	2.6	chr1	45303630	45303668	(203652754)	+	(GGAGCC)n	Simple_repeat	1	39	(0)	87710
19	12.1	0.0	2.6	chr1	47333870	47333907	(201622515)	+	(CCCGC)n	Simple_repeat	1	38	(0)	91369
16	16.3	0.0	2.8	chr1	47438097	47438132	(201518290)	+	(GCG)n	Simple_repeat	1	36	(0)	91599
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
12	18.7	4.3	4.2	chr1	52366414	52366459	(196589963)	+	(CTCG)n	Simple_repeat	1	48	(0)	100700
266	33.2	14.0	4.5	chr1	53196369	53196567	(195759855)	C	MIRb	SINE/MIR	(9)	259	39	102642
19	6.2	0.0	7.5	chr1	53945826	53945865	(195010557)	+	(GCCCC)n	Simple_repeat	1	40	(0)	104098
215	27.2	17.4	0.9	chr1	58903525	58903639	(190052783)	C	MIRb	SINE/MIR	(12)	256	119	113783
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
2251	24.4	4.0	0.8	chr1	60489651	60490134	(188466288)	+	L1M3de	LINE/L1	82	581	(6072)	116623
27539	2.8	0.3	0.1	chr1	60490133	60496149	(188460273)	+	L1PA3	LINE/L1	126	6155	(0)	116624
16	19.3	0.0	8.1	chr1	61742354	61742415	(187214007)	+	(CCCGCCC)n	Simple_repeat	1	62	(0)	118746
14	18.2	0.0	4.9	chr1	61742652	61742692	(187213730)	+	(GCCC)n	Simple_repeat	1	41	(0)	118747
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
225	24.1	11.3	0.2	chr1	63773691	63773791	(185182631)	+	MIR3	SINE/MIR	38	149	(81)	122679
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
17	17.4	2.5	0.0	chr1	64470366	64470405	(184486017)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	123959
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	18.9	2.8	0.0	chr1	64745015	64745050	(184211372)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	124431
25	25.0	3.5	1.1	chr1	64745175	64745261	(184211161)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	124432
21	18.1	0.0	8.2	chr1	64966524	64966596	(183989826)	+	(CCGCC)n	Simple_repeat	1	73	(0)	124796
23	23.6	1.1	5.6	chr1	65254442	65254529	(183701893)	+	(GCG)n	Simple_repeat	1	89	(0)	125433
263	25.9	14.0	9.1	chr1	65255156	65255628	(183700794)	C	L2c	LINE/L2	(0)	3387	2818	125434
17	26.4	3.4	4.4	chr1	65309246	65309333	(183647089)	+	(CCCT)n	Simple_repeat	1	91	(0)	125552
14	4.3	4.2	0.0	chr1	65309511	65309534	(183646888)	+	(CTCC)n	Simple_repeat	1	25	(0)	125553
11	18.6	0.0	7.1	chr1	65420513	65420554	(183535868)	+	G-rich	Low_complexity	1	42	(0)	125759
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
291	22.0	4.4	0.0	chr1	66925695	66925791	(182030631)	+	MIR3	SINE/MIR	30	136	(94)	127978
13	12.2	8.3	0.0	chr1	66930267	66930302	(182026120)	+	(GGCAGC)n	Simple_repeat	1	39	(0)	127982
358	29.5	6.3	13.0	chr1	67701118	67701456	(181254966)	+	L2c	LINE/L2	3072	3386	(1)	129440
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
600	11.9	2.2	6.3	chr1	67963381	67963491	(180992931)	C	LTR10C	LTR/ERV1	(0)	609	482	129901
720	12.6	2.0	6.8	chr1	67963480	67963613	(180992809)	+	LTR10E	LTR/ERV1	481	609	(0)	129902
13	11.9	0.0	6.2	chr1	67963697	67963728	(180992694)	+	(CTCTT)n	Simple_repeat	1	32	(0)	129903
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
3508	10.3	2.7	2.5	chr1	75722858	75723327	(173233095)	+	LTR10C	LTR/ERV1	111	529	(62)	140342
1295	10.3	2.0	0.0	chr1	75723328	75723522	(173232900)	+	LTR9	LTR/ERV1	56	254	(358)	140344
2400	14.9	4.4	2.1	chr1	82782148	82782565	(166173857)	+	MER66-int	LTR/ERV1	6248	6675	(1)	150287
358	26.2	2.4	0.0	chr1	82782595	82782674	(166173748)	+	MER66C	LTR/ERV1	61	142	(413)	150287
1594	14.2	0.0	1.6	chr1	82782691	82782947	(166173475)	+	MER66C	LTR/ERV1	296	548	(7)	150287
12	16.9	0.0	0.0	chr1	84620578	84620604	(164335818)	+	(CTTC)n	Simple_repeat	1	27	(0)	152805
18	19.6	0.0	4.0	chr1	84621094	84621143	(164335279)	+	G-rich	Low_complexity	1	50	(0)	152806
29	0.0	0.0	0.0	chr1	84621265	84621289	(164335133)	+	(TG)n	Simple_repeat	1	25	(0)	152807
13	23.3	2.5	0.0	chr1	84690281	84690320	(164266102)	+	(CGCC)n	Simple_repeat	1	41	(0)	152919
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
17	11.3	0.0	0.0	chr1	85201664	85201692	(163754730)	+	(GCG)n	Simple_repeat	1	29	(0)	153785
12	13.9	0.0	0.0	chr1	88974029	88974052	(159982370)	+	(TAA)n	Simple_repeat	1	24	(0)	159305
15	3.7	7.1	0.0	chr1	88992551	88992578	(159963844)	+	(GCGCC)n	Simple_repeat	1	30	(0)	159336
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
15	8.5	4.7	6.7	chr1	90851702	90851744	(158104678)	+	(GCCCC)n	Simple_repeat	1	45	(0)	161860
15	11.2	0.0	3.2	chr1	92784787	92784821	(156171601)	+	(CCGC)n	Simple_repeat	1	33	(0)	165066
13	4.1	3.7	3.6	chr1	93179890	93179916	(155776506)	+	(GCCTC)n	Simple_repeat	1	28	(0)	165854
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
249	30.6	2.7	8.4	chr1	93846011	93846177	(155110245)	+	MIR	SINE/MIR	58	225	(43)	166924
31	22.1	2.0	4.8	chr1	95234014	95234115	(153722307)	+	(GCCCC)n	Simple_repeat	1	104	(0)	169060
17	18.9	2.9	7.0	chr1	96721667	96721735	(152234687)	+	(CGC)n	Simple_repeat	1	71	(0)	171072
13	7.4	3.1	6.1	chr1	98661688	98661719	(150294703)	+	(GGC)n	Simple_repeat	1	33	(0)	173753
34	5.2	0.0	0.0	chr1	108560105	108560144	(140396278)	+	(GGC)n	Simple_repeat	1	40	(0)	186918
445	23.2	1.9	1.5	chr1	108963593	108963725	(139992697)	C	Charlie15b	DNA/hAT-Charlie	(16)	1045	926	187650
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
320	26.3	7.7	0.7	chr1	112956706	112956908	(135999514)	+	MIR	SINE/MIR	17	237	(31)	194127
195	25.9	5.5	1.2	chr1	113072597	113072682	(135883740)	C	L2c	LINE/L2	(11)	3376	3287	194421
277	27.9	3.4	1.1	chr1	113389729	113389860	(135566562)	C	MIRc	SINE/MIR	(47)	161	30	194967
185	21.6	2.6	0.0	chr1	113389863	113389899	(135566523)	+	L2b	LINE/L2	3338	3375	(0)	194975
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
14	0.0	7.4	3.5	chr1	113758863	113758889	(135197533)	+	(AAAC)n	Simple_repeat	1	29	(0)	195472
384	25.3	18.8	5.2	chr1	113759675	113759907	(135196515)	+	L2b	LINE/L2	3104	3375	(0)	195473
22	0.0	0.0	0.0	chr1	115641538	115641561	(133314861)	+	(TG)n	Simple_repeat	1	24	(0)	198478
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
38	4.2	0.0	3.8	chr1	116667517	116667569	(132288853)	+	(CCCGCTC)n	Simple_repeat	1	53	(0)	200066
12	28.6	0.0	6.9	chr1	116667571	116667642	(132288780)	+	(CCCCCG)n	Simple_repeat	1	72	(0)	200067
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
44	3.7	3.6	0.0	chr1	150579759	150579814	(98376608)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	219361
591	27.9	4.2	5.9	chr1	151510627	151510902	(97445520)	C	L2a	LINE/L2	(0)	3426	3152	221377
27	3.5	0.0	0.0	chr1	155244402	155244431	(93711991)	+	(AAT)n	Simple_repeat	1	30	(0)	227607
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
14	21.3	2.2	2.2	chr1	157046335	157046379	(91910043)	+	(CCCGTG)n	Simple_repeat	1	46	(0)	231179
315	36.0	7.8	3.1	chr1	158112996	158113190	(90843232)	C	L2c	LINE/L2	(0)	3387	3183	232693
13	18.9	2.8	0.0	chr1	158113627	158113662	(90842760)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	232694
645	1.4	0.0	0.0	chr1	161540241	161540314	(87416108)	+	tRNA-Asn-AAC	tRNA	1	74	(3)	237691
12	25.5	0.0	0.0	chr1	161726750	161726786	(87229636)	+	(CGCGG)n	Simple_repeat	1	37	(0)	237995
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
553	32.8	6.2	6.0	chr1	162146208	162146710	(86809712)	C	L1MEb	LINE/L1	(5486)	584	81	238658
14	6.9	0.0	10.5	chr1	165827486	165827523	(83128899)	+	G-rich	Low_complexity	1	38	(0)	244381
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
14	23.4	2.1	2.1	chr1	174159974	174160020	(74796402)	+	(TGC)n	Simple_repeat	1	48	(0)	256811
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
21	22.1	7.3	0.0	chr1	178725125	178725192	(70231230)	+	(CG)n	Simple_repeat	1	73	(0)	263565
22	9.4	0.0	0.0	chr1	178725259	178725292	(70231130)	+	(GCG)n	Simple_repeat	1	34	(0)	263566
17	27.9	0.0	6.1	chr1	178725437	178725450	(70230972)	+	G-rich	Low_complexity	1	18	(64)	263567
16	4.5	0.0	0.0	chr1	178725451	178725473	(70230949)	+	(GGGA)n	Simple_repeat	1	23	(0)	263568
17	27.9	0.0	6.1	chr1	178725474	178725518	(70230904)	+	G-rich	Low_complexity	19	82	(0)	263567
258	25.4	0.0	0.0	chr1	179586108	179586166	(69370256)	C	HAL1ME	LINE/L1	(2285)	180	122	265037
20	0.0	0.0	0.0	chr1	179586177	179586198	(69370224)	+	(A)n	Simple_repeat	1	22	(0)	265038
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
18	19.2	2.7	6.6	chr1	181105313	181105386	(67851036)	+	(GCGCGG)n	Simple_repeat	1	76	(0)	267473
21	16.6	2.9	3.8	chr1	181105455	181105526	(67850896)	+	G-rich	Low_complexity	1	71	(0)	267474
264	28.8	12.6	0.0	chr1	182942537	182942647	(66013775)	C	Charlie18a	DNA/hAT-Charlie	(212)	130	4	270303
54	11.6	2.8	2.7	chr1	183023087	183023194	(65933228)	+	(CCCTC)n	Simple_repeat	1	111	(0)	270460
14	11.3	3.5	0.0	chr1	183023367	183023395	(65933027)	+	(ACCCC)n	Simple_repeat	1	30	(0)	270461
41	4.1	1.9	1.9	chr1	184386769	184386820	(64569602)	+	(AC)n	Simple_repeat	1	53	(0)	272566
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
3349	16.0	1.9	3.8	chr1	195475468	195476099	(53480323)	C	LTR77	LTR/ERV1	(2)	620	1	287483
1062	20.4	0.0	1.0	chr1	196628794	196628991	(52327431)	+	AluJb	SINE/Alu	2	197	(115)	288907
651	15.6	1.8	0.0	chr1	196629003	196629111	(52327311)	+	LTR10C	LTR/ERV1	481	591	(0)	288908
449	25.7	0.0	0.9	chr1	196629113	196629226	(52327196)	+	AluJb	SINE/Alu	199	311	(1)	288907
411	34.7	7.0	4.7	chr1	196629253	196629615	(52326807)	+	L1MEd	LINE/L1	1676	2047	(5056)	288906
18	14.7	4.3	2.0	chr1	197201312	197201358	(51755064)	+	(CCCCT)n	Simple_repeat	1	49	(0)	289611
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
2399	8.9	0.3	0.0	chr1	200488024	200488305	(48468117)	+	AluSp	SINE/Alu	1	283	(30)	294358
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
24	20.0	4.2	5.0	chr1	201539287	201539381	(47417041)	+	(GCGCG)n	Simple_repeat	1	99	(0)	296223
311	25.5	8.6	1.1	chr1	203272978	203273112	(45683310)	+	MIR3	SINE/MIR	40	189	(41)	299326
22	23.5	7.4	3.0	chr1	204151969	204152074	(44804348)	+	(CGGCCCG)n	Simple_repeat	1	135	(11)	301083
13	8.5	0.0	3.7	chr1	204152075	204152101	(44804321)	+	(CCCCG)n	Simple_repeat	1	27	(0)	301084
22	23.5	7.4	3.0	chr1	204152102	204152108	(44804314)	+	(CGGCCCG)n	Simple_repeat	136	146	(0)	301083
13	23.7	0.0	4.2	chr1	205228136	205228183	(43728239)	+	(CCCGC)n	Simple_repeat	1	48	(0)	303044
21	28.1	3.9	4.4	chr1	212432907	212433036	(36523386)	+	(GCCCTG)n	Simple_repeat	1	135	(0)	314490
12	26.8	2.2	0.0	chr1	212433219	212433263	(36523159)	+	G-rich	Low_complexity	1	46	(0)	314491
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
13	10.5	12.2	0.0	chr1	218345793	218345833	(30610589)	+	(GGAGCA)n	Simple_repeat	1	46	(0)	323091
34	7.5	0.0	0.0	chr1	218346051	218346093	(30610329)	+	(CA)n	Simple_repeat	1	43	(0)	323092
13	14.9	8.1	0.0	chr1	218346097	218346133	(30610289)	+	(TGC)n	Simple_repeat	1	40	(0)	323093
196	35.5	4.5	0.0	chr1	218585964	218586070	(30370352)	C	MamRTE1	LINE/RTE-BovB	(170)	3642	3531	323497
256	26.7	6.2	1.9	chr1	218586227	218586333	(30370089)	C	Charlie15a	DNA/hAT-Charlie	(8)	216	105	323498
26	0.0	0.0	0.0	chr1	220527824	220527848	(28428574)	+	(ACAA)n	Simple_repeat	1	25	(0)	326368
15	14.4	0.0	0.0	chr1	220527854	220527877	(28428545)	+	(A)n	Simple_repeat	1	24	(0)	326369
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
15	23.4	2.8	5.4	chr1	220528499	220528570	(28427852)	+	(CCGCCTC)n	Simple_repeat	1	74	(0)	326372
15	18.9	2.3	2.2	chr1	222814877	222814920	(26141502)	+	(CCCTCTG)n	Simple_repeat	1	45	(0)	329730
486	25.0	1.7	0.8	chr1	223134016	223134132	(25822290)	+	MIRb	SINE/MIR	55	172	(96)	330257
215	29.9	11.2	1.6	chr1	223143482	223143610	(25812812)	C	MIR1_Amn	SINE/MIR	(78)	152	10	330276
13	7.5	7.1	0.0	chr1	224183155	224183182	(24773240)	+	(GGCG)n	Simple_repeat	1	30	(0)	331974
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
293	21.4	5.6	3.5	chr1	225883213	225883299	(23073123)	+	MIR3	SINE/MIR	94	182	(26)	334735
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
227	23.6	7.7	0.0	chr1	226939238	226939309	(22017113)	C	Charlie18a	DNA/hAT-Charlie	(191)	151	74	336729
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
2224	18.6	3.2	2.1	chr1	227564047	227564512	(21391910)	C	MER57E3	LTR/ERV1	(16)	471	1	337651
708	13.6	2.9	2.2	chr1	227722163	227722268	(21234154)	C	LTR10C	LTR/ERV1	(0)	591	402	337818
7609	8.8	1.2	1.8	chr1	227722269	227723331	(21233091)	+	MER11C	LTR/ERVK	1	1057	(14)	337819
202	27.1	3.4	8.6	chr1	227787749	227787841	(21168581)	+	AmnSINE1	SINE/5S-Deu-L2	165	252	(323)	337889
13	19.8	0.0	6.5	chr1	227946614	227946659	(21009763)	+	GA-rich	Low_complexity	1	46	(0)	338085
18	4.8	0.0	0.0	chr1	227947298	227947319	(21009103)	+	(TC)n	Simple_repeat	1	22	(0)	338086
1618	13.4	10.9	2.1	chr1	228164872	228165155	(20791267)	+	AluJo	SINE/Alu	1	312	(0)	338375
947	21.2	8.8	1.2	chr1	228165156	228165386	(20791036)	+	L1MB3	LINE/L1	5824	6076	(107)	338374
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
16	20.3	0.0	2.4	chr1	230066975	230067016	(18889406)	+	(CCCCGC)n	Simple_repeat	1	42	(0)	341372
12	18.1	0.0	3.0	chr1	230067368	230067400	(18889022)	+	(GCGCCG)n	Simple_repeat	1	33	(0)	341373
20	20.9	4.4	5.3	chr1	230067416	230067506	(18888916)	+	(GCCCCCT)n	Simple_repeat	1	95	(0)	341374
15	9.9	0.0	7.9	chr1	230754112	230754149	(18202273)	+	G-rich	Low_complexity	1	38	(0)	342359
13	13.5	0.0	7.9	chr1	231162081	231162118	(17794304)	+	G-rich	Low_complexity	1	38	(0)	343022
24	18.8	1.6	3.1	chr1	231421889	231421952	(17534470)	+	(GGC)n	Simple_repeat	1	65	(0)	343471
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
21	17.3	0.0	2.4	chr1	233613655	233613696	(15342726)	+	(CA)n	Simple_repeat	1	42	(0)	346666
28	18.4	2.9	1.4	chr1	233614033	233614102	(15342320)	+	G-rich	Low_complexity	1	72	(0)	346667
1533	26.0	7.4	3.2	chr1	233635662	233636668	(15319754)	C	L2a	LINE/L2	(0)	3426	2378	346694
59	3.5	0.0	0.0	chr1	233904440	233904498	(15051924)	+	(AG)n	Simple_repeat	1	59	(0)	347066
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
12	11.6	3.3	3.2	chr1	233904670	233904699	(15051723)	+	(CGACC)n	Simple_repeat	1	31	(0)	347068
13	18.8	0.0	0.0	chr1	234478558	234478588	(14477834)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	347927
21	23.3	0.0	0.0	chr1	234609909	234609953	(14346469)	+	G-rich	Low_complexity	1	45	(0)	348166
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
1339	18.8	3.1	2.9	chr1	235670104	235670445	(13285977)	+	LTR10B2	LTR/ERV1	212	547	(0)	350207
1242	25.6	8.9	2.8	chr1	235670449	235671014	(13285408)	+	HERVIP10B3-int	LTR/ERV1	4	624	(7113)	350207
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1978	18.5	1.8	0.0	chr1	236951739	236952121	(12004301)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	352522
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
14	27.3	0.0	0.0	chr1	241640678	241640718	(7315704)	+	(CATT)n	Simple_repeat	1	41	(0)	359587
1026	20.1	2.3	6.9	chr1	241990214	241990351	(6966071)	+	MLT1G	LTR/ERVL-MaLR	262	400	(191)	360280
2426	7.4	1.0	0.0	chr1	241990352	241990647	(6965775)	C	AluSc8	SINE/Alu	(8)	303	5	360281
22	22.9	4.1	1.3	chr1	243850046	243850118	(5106304)	+	(CGG)n	Simple_repeat	1	76	(0)	363167
13	32.1	0.0	0.0	chr1	243850081	243850130	(5106292)	+	G-rich	Low_complexity	1	50	(0)	363168
15	15.0	2.6	2.5	chr1	243850144	243850183	(5106239)	+	(CCCCT)n	Simple_repeat	1	40	(0)	363169
19	17.2	3.1	4.5	chr1	243850281	243850295	(5106127)	+	GA-rich	Low_complexity	1	15	(0)	363170
28	0.0	0.0	0.0	chr1	243850296	243850321	(5106101)	+	(GGC)n	Simple_repeat	1	26	(0)	363171
19	17.2	3.1	4.5	chr1	243850322	243850370	(5106052)	+	GA-rich	Low_complexity	16	63	(0)	363172
14	24.6	1.4	6.9	chr1	243850536	243850606	(5105816)	+	(CCG)n	Simple_repeat	1	72	(0)	363173
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
200	28.2	3.7	2.8	chr1	243979767	243979872	(4976550)	C	L2a	LINE/L2	(54)	3372	3266	363402
15	23.9	4.1	0.0	chr1	244048208	244048256	(4908166)	+	(CGC)n	Simple_repeat	1	51	(0)	363518
15	13.1	2.0	8.0	chr1	244048243	244048291	(4908131)	+	(CCGCC)n	Simple_repeat	1	50	(0)	363519
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
603	26.8	17.6	5.4	chr1	244573447	244573846	(4382576)	C	MLT1H	LTR/ERVL-MaLR	(73)	476	10	364374
4256	11.3	0.5	2.2	chr1	244573858	244574501	(4381921)	C	LTR10E	LTR/ERV1	(0)	633	1	364377
2334	16.4	1.6	2.4	chr1	244575648	244576316	(4380106)	C	HERVIP10FH-int	LTR/ERV1	(4257)	845	22	364377
841	12.3	1.6	0.7	chr1	244576338	244576488	(4379934)	C	LTR10E	LTR/ERV1	(0)	633	427	364377
1010	12.5	0.7	0.0	chr1	244576456	244576607	(4379815)	+	LTR10E	LTR/ERV1	481	633	(0)	364381
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
571	25.4	11.4	2.7	chr10	5294020	5294395	(128503027)	C	LTR33A_	LTR/ERVL	(103)	428	16	377515
3716	12.0	8.5	1.8	chr10	5683542	5684272	(128113150)	+	Tigger3b	DNA/TcMar-Tigger	446	1230	(1)	378127
420	28.8	7.8	1.7	chr10	6088443	6088672	(127708750)	C	L1MC4	LINE/L1	(4301)	2010	1766	378876
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
56	0.0	0.0	6.8	chr10	6580257	6580329	(127217093)	+	(GCGGGGCTG)n	Simple_repeat	1	73	(0)	379727
20	14.4	0.0	0.0	chr10	7411101	7411132	(126386290)	+	(TG)n	Simple_repeat	1	32	(0)	380969
10705	5.1	0.1	0.1	chr10	13076939	13079021	(120718401)	+	L1PA5	LINE/L1	4069	6152	(2)	390065
1264	12.8	0.6	0.0	chr10	13079022	13079201	(120718221)	+	LTR10E	LTR/ERV1	453	633	(0)	390064
2020	18.4	2.7	5.8	chr10	13079205	13079874	(120717548)	+	HERVIP10FH-int	LTR/ERV1	4	829	(4273)	390064
4757	7.5	0.5	1.7	chr10	13083382	13084021	(120713401)	+	LTR10E	LTR/ERV1	2	633	(0)	390069
2417	9.7	0.3	7.2	chr10	13084022	13084274	(120713148)	+	MER41C	LTR/ERV1	172	404	(117)	390071
2156	5.8	0.8	0.4	chr10	13302615	13302875	(120494547)	+	AluYj4	SINE/Alu	1	262	(49)	390503
34	16.7	6.0	1.1	chr10	14174239	14174321	(119623101)	+	(CT)n	Simple_repeat	1	88	(0)	392027
4278	10.2	2.8	0.2	chr10	17262200	17262815	(116534607)	+	LTR10E	LTR/ERV1	1	633	(0)	397062
1472	26.3	9.6	6.2	chr10	19743241	19744339	(114053083)	+	L1ME3A	LINE/L1	3804	5006	(1140)	401049
2098	16.7	1.6	0.0	chr10	19744340	19744699	(114052723)	+	MER47A	DNA/TcMar-Tigger	1	366	(0)	401051
1631	15.8	3.8	0.0	chr10	21315535	21315787	(112481635)	C	AluJr	SINE/Alu	(49)	263	1	403392
15	11.6	3.3	3.2	chr10	21315942	21315971	(112481451)	+	(TC)n	Simple_repeat	1	31	(0)	403393
15	21.9	0.0	2.3	chr10	21316437	21316480	(112480942)	+	(TTTTTTA)n	Simple_repeat	1	44	(0)	403394
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
12	36.1	0.0	2.6	chr10	21534011	21534087	(112263335)	+	(CCCGCG)n	Simple_repeat	1	77	(0)	403878
29	18.2	2.9	1.4	chr10	21534386	21534455	(112262967)	+	GA-rich	Low_complexity	1	72	(0)	403879
22	29.0	0.0	0.0	chr10	22003318	22003381	(111794041)	+	(CAG)n	Simple_repeat	1	64	(0)	404666
16	23.4	0.0	2.1	chr10	22003596	22003642	(111793780)	+	(GGCG)n	Simple_repeat	1	47	(0)	404667
15	25.6	0.0	0.0	chr10	25175005	25175046	(108622376)	+	(AGC)n	Simple_repeat	1	42	(0)	409842
12	8.4	0.0	6.9	chr10	31031928	31031956	(102765466)	+	(GCCCC)n	Simple_repeat	1	29	(0)	419722
19	16.9	2.0	2.0	chr10	31032472	31032520	(102764902)	+	(GCTCCCG)n	Simple_repeat	1	50	(0)	419723
3701	12.0	1.7	0.9	chr10	35443547	35444125	(98353297)	+	LTR10C	LTR/ERV1	1	529	(62)	426597
721	14.0	1.7	0.0	chr10	35444126	35444239	(98353183)	C	Tigger3b	DNA/TcMar-Tigger	(776)	455	340	426596
2192	12.8	0.3	0.0	chr10	35444241	35444546	(98352876)	C	AluSz	SINE/Alu	(4)	308	2	426598
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
18	10.4	0.0	0.0	chr10	43138783	43138813	(90658609)	+	(TGTTT)n	Simple_repeat	1	31	(0)	432987
1090	9.3	1.9	2.5	chr10	43420119	43420280	(90377142)	C	AluJb	SINE/Alu	(8)	304	144	433466
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
338	28.2	8.1	2.9	chr10	45000468	45000650	(88796772)	+	MIRb	SINE/MIR	14	210	(52)	435514
24	20.4	3.5	4.5	chr10	45001106	45001191	(88796231)	+	G-rich	Low_complexity	1	89	(0)	435515
268	28.7	4.9	1.4	chr10	45594285	45594422	(88203000)	C	MIR3	SINE/MIR	(18)	190	48	436270
37	0.0	2.6	0.0	chr10	45594600	45594637	(88202785)	+	(CCCAG)n	Simple_repeat	1	39	(0)	436271
14	8.1	0.0	6.7	chr10	45594704	45594733	(88202689)	+	(GGC)n	Simple_repeat	1	30	(0)	436272
11	18.4	6.7	2.1	chr10	48306614	48306658	(85490764)	+	(GCGCGT)n	Simple_repeat	1	48	(0)	440378
15	20.1	0.0	0.0	chr10	48306885	48306918	(85490504)	+	(GCC)n	Simple_repeat	1	34	(0)	440379
907	27.8	10.4	0.5	chr10	48340741	48341112	(85456310)	C	L1MEc	LINE/L1	(5951)	449	37	440430
194	20.0	0.0	0.0	chr10	58334728	58334767	(75462655)	C	MIRc	SINE/MIR	(112)	156	117	453992
16	8.2	0.0	0.0	chr10	58334920	58334945	(75462477)	+	(GGCGG)n	Simple_repeat	1	26	(0)	453993
23	11.4	0.0	0.0	chr10	59906294	59906331	(73891091)	+	(CCG)n	Simple_repeat	1	38	(0)	456271
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
13	27.7	1.5	4.5	chr10	63521301	63521323	(70276099)	+	G-rich	Low_complexity	1	66	(0)	461936
17	8.3	4.8	4.5	chr10	63521324	63521365	(70276057)	+	(GGCG)n	Simple_repeat	1	44	(0)	461937
11	22.5	3.5	5.1	chr10	63521661	63521717	(70275705)	+	(GGCCTG)n	Simple_repeat	1	59	(0)	461938
29	22.2	5.7	3.8	chr10	63521784	63521907	(70275515)	+	(GCG)n	Simple_repeat	1	131	(0)	461939
257	23.2	12.8	2.4	chr10	65614860	65614943	(68182479)	C	MLT1I	LTR/ERVL-MaLR	(22)	389	296	464964
2268	15.5	1.8	2.7	chr10	65615102	65615531	(68181891)	C	LTR10E	LTR/ERV1	(43)	590	161	464965
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
20	0.0	0.0	0.0	chr10	69507652	69507673	(64289749)	+	(T)n	Simple_repeat	1	22	(0)	471747
14	19.7	4.2	2.0	chr10	69507674	69507697	(64289725)	+	(TGTTT)n	Simple_repeat	3	50	(0)	471748
39	4.6	0.0	0.0	chr10	71235076	71235120	(62562302)	+	(CTGCCT)n	Simple_repeat	1	45	(0)	474843
183	18.0	2.0	10.7	chr10	71235336	71235391	(62562031)	C	L2b	LINE/L2	(18)	3357	3307	474844
198	26.0	1.3	6.1	chr10	71377767	71377848	(62419574)	C	MIRb	SINE/MIR	(1)	267	190	475124
234	18.8	10.6	2.9	chr10	71393512	71393615	(62403807)	+	LTR33A_	LTR/ERVL	1	113	(418)	475175
638	23.4	7.5	0.0	chr10	71393682	71393878	(62403544)	+	LTR33A_	LTR/ERVL	235	447	(84)	475175
379	32.1	3.6	1.8	chr10	71393965	71394129	(62403293)	C	MIR3	SINE/MIR	(13)	195	28	475176
18	7.7	0.0	0.0	chr10	71964327	71964354	(61833068)	+	(GAG)n	Simple_repeat	1	28	(0)	476261
15	16.1	3.5	0.0	chr10	72260769	72260804	(61536618)	+	(CT)n	Simple_repeat	1	37	(0)	476890
17	10.7	4.5	4.3	chr10	72260962	72261005	(61536417)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	476891
213	26.9	6.3	4.6	chr10	75532497	75532605	(58264817)	+	MamRTE1	LINE/RTE-BovB	3632	3742	(70)	483247
28	29.6	2.6	0.9	chr10	80454073	80454185	(53343237)	+	G-rich	Low_complexity	1	116	(0)	491253
12	15.6	7.3	5.1	chr10	84328520	84328574	(49468848)	+	(GCTGCGC)n	Simple_repeat	1	59	(0)	496706
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
632	29.3	4.7	0.8	chr10	86399562	86399805	(47397617)	+	L1ME3B	LINE/L1	5935	6188	(54)	499427
17	17.1	4.7	3.6	chr10	86756475	86756529	(47040893)	+	G-rich	Low_complexity	1	55	(0)	500080
17	16.1	2.3	2.2	chr10	86756568	86756611	(47040811)	+	(CCCGCC)n	Simple_repeat	1	45	(0)	500081
13	13.1	0.0	0.0	chr10	86756625	86756649	(47040773)	+	(CGG)n	Simple_repeat	1	25	(0)	500082
16	3.5	0.0	10.8	chr10	86756682	86756718	(47040704)	+	(AGG)n	Simple_repeat	1	37	(0)	500083
16	27.6	0.0	1.8	chr10	88880176	88880230	(44917192)	+	(CAGAGG)n	Simple_repeat	1	55	(0)	503504
3524	7.4	5.1	0.2	chr10	92591083	92591570	(41205852)	+	LTR10D	LTR/ERV1	1	513	(0)	509465
24	0.0	2.8	5.4	chr10	97185997	97186032	(36611390)	+	(CA)n	Simple_repeat	1	37	(0)	517412
469	26.9	7.2	3.3	chr10	97291984	97292163	(36505259)	C	MIRb	SINE/MIR	(10)	252	68	517638
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
343	26.5	11.1	2.2	chr10	102064962	102065085	(31732337)	+	L2a	LINE/L2	3287	3426	(0)	526214
308	27.4	7.9	2.5	chr10	103918661	103918780	(29878642)	+	MamRep4096	DNA/hAT-Tip100	3	129	(297)	529891
465	20.1	3.9	2.8	chr10	110497263	110497403	(23300019)	C	L1MC5	LINE/L1	(14)	9290	9163	539646
12	22.6	2.3	2.3	chr10	110497915	110497957	(23299465)	+	G-rich	Low_complexity	1	44	(0)	539647
19	17.3	0.0	0.0	chr10	110644577	110644615	(23152807)	+	(GCC)n	Simple_repeat	1	39	(0)	539928
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
1822	23.5	6.7	0.5	chr10	119644411	119644833	(14152589)	C	LTR16A	LTR/ERVL	(0)	451	1	554305
739	29.4	7.3	2.6	chr10	119644834	119644914	(14152508)	+	MIR	SINE/MIR	185	260	(2)	554304
439	28.1	13.4	4.8	chr10	119644910	119645097	(14152325)	C	L2b	LINE/L2	(7)	3368	3185	554306
4523	9.8	0.3	1.9	chr10	119645098	119645556	(14151866)	C	LTR10E	LTR/ERV1	(0)	633	179	554307
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
17	14.9	4.2	4.0	chr10	120456901	120456948	(13340474)	+	(GGC)n	Simple_repeat	1	50	(0)	555677
23	18.9	1.9	0.0	chr10	120457144	120457197	(13340225)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	555678
2263	11.6	0.3	0.3	chr10	121743912	121744221	(12053201)	C	AluSz	SINE/Alu	(2)	310	1	557648
19	10.4	4.7	2.2	chr10	124462052	124462094	(9335328)	+	G-rich	Low_complexity	1	45	(0)	561978
507	25.8	1.1	9.0	chr10	124462197	124462312	(9335110)	+	MER33	DNA/hAT-Charlie	1	118	(206)	561979
14	28.9	1.8	1.7	chr10	125160234	125160290	(8637132)	+	(GGC)n	Simple_repeat	1	58	(0)	563049
18	29.8	0.0	4.0	chr10	125160363	125160437	(8636985)	+	(GGC)n	Simple_repeat	1	75	(0)	563050
15	16.6	0.0	0.0	chr10	125160530	125160556	(8636866)	+	(AC)n	Simple_repeat	1	27	(0)	563051
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
17	23.1	1.5	4.5	chr10	127906985	127907050	(5890372)	+	(CGCCCC)n	Simple_repeat	1	67	(0)	566791
16	21.1	4.1	0.0	chr10	127907052	127907100	(5890322)	+	(CGGAGC)n	Simple_repeat	1	51	(0)	566792
11	22.6	1.9	5.7	chr10	127907202	127907253	(5890169)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	566793
1229	9.9	1.2	0.0	chr10	132940580	132940741	(856681)	C	AluSx	SINE/Alu	(12)	300	137	572061
284	20.4	2.3	2.1	chr10	133520013	133520101	(277321)	+	L1ME3D	LINE/L1	5963	6055	(188)	572594
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
16	19.2	2.0	3.9	chr11	568893	568952	(134517670)	+	(CGCCCCG)n	Simple_repeat	1	58	(0)	573570
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
14	20.3	0.0	10.1	chr11	3423223	3423291	(131663331)	+	(GGCGG)n	Simple_repeat	1	69	(0)	577000
15	30.9	0.0	5.1	chr11	3423415	3423493	(131663129)	+	G-rich	Low_complexity	1	79	(0)	577001
13	24.2	2.3	0.0	chr11	3642034	3642077	(131444545)	+	(CCCGCCC)n	Simple_repeat	1	45	(0)	577375
12	4.2	0.0	10.0	chr11	3840729	3840758	(131245864)	+	(CCCG)n	Simple_repeat	1	30	(0)	577809
15	27.9	0.0	9.7	chr11	3840910	3841023	(131245599)	+	G-rich	Low_complexity	1	114	(0)	577810
21	10.2	4.8	0.0	chr11	3840983	3841024	(131245598)	+	(GGGCG)n	Simple_repeat	1	44	(0)	577811
20	26.3	0.0	6.5	chr11	6259746	6259837	(128826785)	+	G-rich	Low_complexity	1	92	(0)	581036
22	12.4	2.2	2.1	chr11	12377459	12377504	(122709118)	+	GA-rich	Low_complexity	1	47	(0)	590686
11	24.6	4.0	1.9	chr11	12377559	12377608	(122709014)	+	(AGCCGC)n	Simple_repeat	1	52	(0)	590687
18	23.7	4.9	1.6	chr11	12377862	12377922	(122708700)	+	(CG)n	Simple_repeat	1	64	(0)	590688
19	8.8	2.6	2.6	chr11	12674114	12674151	(122412471)	+	(CCGCC)n	Simple_repeat	1	39	(0)	591159
27	13.7	3.7	6.0	chr11	12674441	12674521	(122412101)	+	(CGCCG)n	Simple_repeat	1	84	(0)	591160
15	17.7	6.7	0.0	chr11	12674718	12674770	(122411852)	+	G-rich	Low_complexity	1	56	(0)	591161
191	32.9	2.1	1.4	chr11	18013379	18013523	(117073099)	C	MIRc	SINE/MIR	(35)	233	88	599738
21	18.3	0.0	0.0	chr11	32435414	32435457	(102651165)	+	G-rich	Low_complexity	1	44	(0)	621586
19	20.9	5.9	1.4	chr11	33257311	33257378	(101829244)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	623167
19	0.0	3.3	3.2	chr11	33257658	33257687	(101828935)	+	(AGC)n	Simple_repeat	1	31	(0)	623168
391	32.2	1.6	0.0	chr11	47334224	47334344	(87752278)	C	MIRc	SINE/MIR	(145)	123	1	645685
2243	11.4	0.0	0.7	chr11	47334566	47334862	(87751760)	C	AluSz	SINE/Alu	(17)	295	1	645686
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
16	18.4	8.4	2.6	chr11	47553221	47553291	(87533331)	+	(GCGCCGA)n	Simple_repeat	1	77	(0)	646146
191	22.6	3.6	1.9	chr11	47553495	47553548	(87533074)	+	L2c	LINE/L2	3333	3387	(0)	646147
13	4.8	0.0	4.2	chr11	59172094	59172117	(75914505)	+	(GGGA)n	Simple_repeat	1	24	(0)	656440
12	17.6	4.0	5.8	chr11	59172219	59172268	(75914354)	+	(GCCGCCG)n	Simple_repeat	1	52	(0)	656441
682	0.0	0.0	0.0	chr11	59566380	59566452	(75520170)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656983
17	15.3	0.0	2.6	chr11	59668818	59668855	(75417767)	+	GA-rich	Low_complexity	1	38	(0)	657193
20	8.8	0.0	5.0	chr11	59668900	59668939	(75417683)	+	(GGGGAG)n	Simple_repeat	1	40	(0)	657194
18	30.1	0.0	1.6	chr11	59755459	59755521	(75331101)	+	(GCC)n	Simple_repeat	1	63	(0)	657377
2212	9.8	0.0	0.3	chr11	61190606	61190910	(73895712)	C	AluSx1	SINE/Alu	(8)	304	1	659674
2177	12.8	2.1	7.1	chr11	61190911	61190987	(73895635)	C	MLT1B	LTR/ERVL-MaLR	(275)	115	48	659672
3739	10.7	5.2	2.0	chr11	61190988	61191599	(73895023)	C	LTR10E	LTR/ERV1	(0)	633	1	659675
3637	10.5	3.3	1.5	chr11	61998954	61999544	(73087078)	+	LTR10E	LTR/ERV1	1	602	(31)	661240
761	10.4	6.9	0.7	chr11	61999546	61999681	(73086941)	+	L1MA5A	LINE/L1	6153	6297	(0)	661241
2858	17.8	2.8	5.2	chr11	62222807	62223427	(72863195)	+	LTR10E	LTR/ERV1	1	609	(0)	661702
1564	21.3	0.7	0.7	chr11	62223428	62223715	(72862907)	+	HERVIP10FH-int	LTR/ERV1	4813	5100	(2)	661703
4467	8.2	0.5	1.6	chr11	63791518	63792075	(71294547)	+	LTR10E	LTR/ERV1	82	633	(0)	664399
27	17.4	5.1	8.3	chr11	64803150	64803287	(70283335)	+	G-rich	Low_complexity	1	145	(0)	666238
17	21.5	3.4	4.9	chr11	65354770	65354828	(69731794)	+	(GC)n	Simple_repeat	1	61	(0)	667385
15	8.2	0.0	3.6	chr11	65354964	65354991	(69731631)	+	(GCGG)n	Simple_repeat	1	28	(0)	667386
2266	8.9	1.7	0.0	chr11	66022060	66022352	(69064270)	+	AluSx1	SINE/Alu	3	300	(12)	668662
462	25.5	10.8	7.7	chr11	66022353	66022443	(69064179)	+	MIR	SINE/MIR	151	242	(26)	668661
246	32.3	6.1	0.0	chr11	66022699	66022791	(69063831)	+	MIRb	SINE/MIR	139	237	(31)	668663
20	14.9	2.1	2.1	chr11	66347621	66347667	(68738955)	+	(CCGAG)n	Simple_repeat	1	48	(0)	669279
11	17.8	5.1	0.0	chr11	66347661	66347679	(68738943)	+	(CCCAGCC)n	Simple_repeat	1	21	(0)	669280
40	0.0	0.0	0.0	chr11	66347680	66347716	(68738906)	+	(CCGCCCG)n	Simple_repeat	1	37	(0)	669281
11	17.8	5.1	0.0	chr11	66347717	66347735	(68738887)	+	(CCCAGCC)n	Simple_repeat	1	19	(0)	669282
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
183	23.1	5.8	8.4	chr11	66616000	66616070	(68470552)	+	L2b	LINE/L2	3253	3321	(54)	669931
352	22.7	5.8	1.0	chr11	67469596	67469693	(67616929)	C	MIRb	SINE/MIR	(83)	185	83	671696
38	23.0	1.8	1.8	chr11	68120913	68121022	(66965600)	+	(GCGGCG)n	Simple_repeat	1	112	(0)	672797
30	12.0	4.5	2.9	chr11	68121277	68121343	(66965279)	+	(CGG)n	Simple_repeat	1	70	(0)	672798
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
11	16.9	2.9	2.8	chr11	68839232	68839266	(66247356)	+	(CCGCCG)n	Simple_repeat	1	36	(0)	674056
1344	25.5	5.4	2.8	chr11	70038173	70038567	(65048055)	+	LTR10C	LTR/ERV1	186	591	(0)	676178
568	26.2	5.1	5.3	chr11	70038568	70038847	(65047775)	+	HERVIP10F-int	LTR/ERV1	2	287	(7303)	676178
757	26.6	4.7	9.0	chr11	70683495	70683762	(64402860)	C	MLT1D	LTR/ERVL-MaLR	(6)	499	206	677204
15	11.8	8.1	0.0	chr11	73141921	73141957	(61944665)	+	GA-rich	Low_complexity	1	40	(0)	681262
2071	11.7	3.9	0.0	chr11	73982305	73982603	(61104019)	+	AluSx1	SINE/Alu	1	311	(1)	683164
16	11.6	2.4	4.8	chr11	73982881	73982921	(61103701)	+	G-rich	Low_complexity	1	42	(0)	683165
15	15.8	4.5	2.2	chr11	75525673	75525716	(59560906)	+	(GCAGG)n	Simple_repeat	1	46	(0)	686263
266	22.3	17.5	2.1	chr11	76206122	76206217	(58880405)	C	MIRb	SINE/MIR	(71)	197	84	687527
35	9.4	0.0	8.5	chr11	77474131	77474212	(57612410)	+	(CCCCTC)n	Simple_repeat	1	82	(0)	689967
472	19.7	4.9	0.0	chr11	77589146	77589262	(57497360)	+	L1MB4	LINE/L1	6052	6174	(6)	690201
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
205	30.5	7.9	0.0	chr11	78188432	78188513	(56898109)	C	MIRc	SINE/MIR	(106)	162	74	691567
13	19.2	6.1	1.9	chr11	82733767	82733815	(52352807)	+	(CGCCCC)n	Simple_repeat	1	52	(0)	699379
7232	18.2	10.9	2.3	chr11	85027379	85028978	(50057644)	C	MER52A	LTR/ERV1	(0)	1755	1	703282
218	28.4	3.9	0.0	chr11	85854743	85854816	(49231806)	C	MIR3	SINE/MIR	(47)	161	85	704507
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
22	18.7	1.5	4.5	chr11	86069367	86069432	(49017190)	+	G-rich	Low_complexity	1	67	(0)	704860
413	30.1	12.8	0.7	chr11	92953765	92954058	(42132564)	C	MER102b	DNA/hAT-Charlie	(2)	339	5	714897
843	11.4	0.0	0.8	chr11	92954439	92954570	(42132052)	C	L1MA4	LINE/L1	(5)	6295	6165	714898
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
15	14.3	3.0	2.9	chr11	94768892	94768924	(40317698)	+	(GC)n	Simple_repeat	1	34	(0)	717652
16	23.0	3.9	0.0	chr11	95089758	95089808	(39996814)	+	(CCCGC)n	Simple_repeat	1	53	(0)	718109
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
20	13.7	1.9	5.5	chr11	107928336	107928409	(27158213)	+	(CCCCCG)n	Simple_repeat	1	71	(0)	735863
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
13	15.8	0.0	7.3	chr11	110093511	110093551	(24993071)	+	G-rich	Low_complexity	1	41	(0)	739266
1011	24.9	5.5	3.3	chr11	110362826	110363161	(24723461)	C	HAL1ME	LINE/L1	(1446)	1019	676	739713
1412	23.9	11.1	3.0	chr11	110363259	110363729	(24722893)	C	HAL1ME	LINE/L1	(1940)	525	12	739713
13	27.9	2.9	2.9	chr11	110429986	110430053	(24656569)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	739820
12	22.7	0.0	2.6	chr11	111602442	111602479	(23484143)	+	G-rich	Low_complexity	1	38	(0)	741647
14	23.3	0.0	2.4	chr11	111602500	111602541	(23484081)	+	(CCGC)n	Simple_repeat	1	42	(0)	741648
23	11.1	0.0	0.0	chr11	117144738	117144776	(17941846)	+	(GCCCT)n	Simple_repeat	1	39	(0)	750609
17	14.9	2.7	0.0	chr11	121427324	121427360	(13659262)	+	(CCCGG)n	Simple_repeat	1	38	(0)	758099
184	29.6	11.7	3.6	chr11	121427459	121427623	(13658999)	+	L2b	LINE/L2	3190	3369	(57)	758093
12	25.6	0.0	0.0	chr11	124876298	124876334	(10210288)	+	G-rich	Low_complexity	1	37	(0)	763704
17	13.0	7.1	0.0	chr11	128522439	128522480	(6564142)	+	G-rich	Low_complexity	1	45	(0)	769017
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
4945	3.8	0.8	0.0	chr12	697925	698510	(132576799)	+	LTR10C	LTR/ERV1	1	591	(0)	779270
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
45	25.6	3.8	4.5	chr12	991143	991354	(132283955)	+	(CGG)n	Simple_repeat	1	220	(0)	779868
16	17.7	1.7	6.8	chr12	991627	991684	(132283625)	+	G-rich	Low_complexity	1	59	(0)	779869
37	14.4	2.6	1.2	chr12	1661850	1661927	(131613382)	+	G-rich	Low_complexity	1	80	(0)	781039
26	0.0	4.0	7.7	chr12	2052894	2052943	(131222366)	+	(CGGG)n	Simple_repeat	1	52	(0)	781624
19	5.6	2.3	6.8	chr12	2053028	2053070	(131222239)	+	(GCGGC)n	Simple_repeat	1	44	(0)	781625
13	16.0	0.0	7.3	chr12	2053206	2053246	(131222063)	+	(CCCCT)n	Simple_repeat	1	41	(0)	781626
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
356	32.0	4.9	8.3	chr12	2768157	2768397	(130506912)	+	L2c	LINE/L2	3071	3307	(80)	782615
200	13.2	2.6	2.6	chr12	2768385	2768423	(130506886)	+	L2c	LINE/L2	3269	3307	(80)	782616
189	15.8	2.6	2.6	chr12	2768432	2768470	(130506839)	+	L2c	LINE/L2	3269	3307	(80)	782616
270	25.4	2.6	10.2	chr12	2768479	2768605	(130506704)	+	L2c	LINE/L2	3269	3385	(2)	782617
267	29.0	16.9	1.2	chr12	6471272	6471435	(126803874)	+	L2	LINE/L2	2440	2634	(785)	788778
393	27.4	12.7	0.0	chr12	6890867	6890990	(126384319)	C	MIRb	SINE/MIR	(70)	198	57	789581
619	26.0	0.0	5.2	chr12	6961639	6961792	(126313517)	C	MIR	SINE/MIR	(101)	161	16	789703
15	21.4	1.6	6.3	chr12	8697834	8697897	(124577412)	+	(CGCCG)n	Simple_repeat	1	60	(0)	792746
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
33999	22.6	1.6	2.8	chr12	9903202	9910908	(123364401)	C	HERVI-int	LTR/ERV1	(31)	7754	4	794463
1999	18.0	5.0	4.2	chr12	9910913	9911410	(123363899)	C	LTR10B2	LTR/ERV1	(0)	503	1	794463
12	12.3	5.1	4.9	chr12	12562720	12562758	(120712551)	+	G-rich	Low_complexity	1	41	(0)	798343
23	11.5	0.0	0.0	chr12	12562926	12562963	(120712346)	+	(CCT)n	Simple_repeat	1	38	(0)	798344
13	20.4	0.0	7.7	chr12	12562962	12563013	(120712296)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	798345
11	21.7	7.3	1.7	chr12	12725648	12725702	(120549607)	+	(CCTCGCG)n	Simple_repeat	1	59	(0)	798636
21	13.4	0.0	2.3	chr12	15911703	15911745	(117363564)	+	A-rich	Low_complexity	1	43	(0)	803495
1295	25.8	5.0	2.9	chr12	16309649	16310023	(116965286)	C	LTR10C	LTR/ERV1	(21)	570	188	804109
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
14	16.1	0.0	0.0	chr12	20369562	20369589	(112905720)	+	GA-rich	Low_complexity	1	28	(0)	809558
12	10.0	5.6	5.3	chr12	22544213	22544248	(110731061)	+	G-rich	Low_complexity	1	38	(0)	812278
16	13.3	2.7	5.3	chr12	22544266	22544302	(110731007)	+	(GC)n	Simple_repeat	1	38	(0)	812279
2062	15.7	1.4	2.7	chr12	25711086	25711516	(107563793)	C	LTR10E	LTR/ERV1	(43)	590	161	816865
14	18.5	2.6	2.5	chr12	30754859	30754897	(102520412)	+	(CTC)n	Simple_repeat	1	40	(0)	824129
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
1627	20.6	12.0	2.1	chr12	32043765	32044045	(101231264)	+	MSTA	LTR/ERVL-MaLR	1	323	(105)	826671
1866	16.6	20.5	5.8	chr12	32044046	32044507	(101230802)	C	LTR10B1	LTR/ERV1	(0)	547	1	826672
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
26	0.0	0.0	0.0	chr12	32399402	32399426	(100875883)	+	(GGC)n	Simple_repeat	1	25	(0)	827410
2488	6.4	0.0	0.0	chr12	32678610	32678906	(100596403)	+	AluY	SINE/Alu	15	311	(0)	827924
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
270	29.3	5.7	4.7	chr12	32756019	32756184	(100519125)	+	MIR	SINE/MIR	58	229	(39)	828066
3588	11.4	5.2	0.4	chr12	38669550	38670101	(94605208)	+	LTR19B	LTR/ERV1	1	580	(0)	831412
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
18	19.6	1.7	5.1	chr12	42144639	42144696	(91130613)	+	(CGC)n	Simple_repeat	1	59	(0)	836071
13	5.2	0.0	0.0	chr12	42144751	42144770	(91130539)	+	(CCG)n	Simple_repeat	1	20	(0)	836072
561	27.6	6.0	0.3	chr12	42145087	42145286	(91130023)	+	MIRb	SINE/MIR	6	221	(47)	836073
19	23.2	0.0	3.4	chr12	42237770	42237868	(91037441)	+	(CCCCGC)n	Simple_repeat	1	95	(0)	836251
18	31.3	0.0	2.7	chr12	42237908	42237981	(91037328)	+	(CGC)n	Simple_repeat	1	74	(0)	836252
34	0.0	0.0	0.0	chr12	42484012	42484048	(90791261)	+	(A)n	Simple_repeat	1	37	(0)	836701
13	18.9	0.0	0.0	chr12	45216357	45216386	(88058923)	+	GA-rich	Low_complexity	1	30	(0)	840513
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	17.1	5.4	3.4	chr12	45729238	45729306	(87546003)	+	(CCG)n	Simple_repeat	1	70	(0)	841279
230	35.0	0.0	4.9	chr12	47772975	47773076	(85502233)	C	MER5A	DNA/hAT-Charlie	(43)	146	50	844179
21	24.8	6.1	0.0	chr12	47773124	47773205	(85502104)	+	G-rich	Low_complexity	1	87	(0)	844180
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
17	20.5	0.0	9.5	chr12	49623347	49623420	(83651889)	+	G-rich	Low_complexity	1	74	(0)	847520
1645	12.6	4.2	0.8	chr12	50169879	50170132	(83105177)	C	AluSz	SINE/Alu	(21)	291	29	848574
1288	23.6	3.3	4.2	chr12	50170177	50170544	(83104765)	C	LTR10C	LTR/ERV1	(62)	529	188	848575
17	24.4	0.0	4.8	chr12	53180926	53180988	(80094321)	+	G-rich	Low_complexity	1	63	(0)	854225
18	7.0	0.0	5.9	chr12	53380385	53380418	(79894891)	+	(GCG)n	Simple_repeat	1	34	(0)	854631
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
36	19.9	2.1	7.6	chr12	56189476	56189616	(77085693)	+	(GCC)n	Simple_repeat	1	144	(0)	859049
15	0.0	0.0	4.3	chr12	56266850	56266872	(77008437)	+	(CCTT)n	Simple_repeat	1	23	(0)	859192
17	28.0	1.5	1.5	chr12	57430640	57430705	(75844604)	+	(CGCC)n	Simple_repeat	1	67	(0)	861300
14	24.1	1.4	6.8	chr12	57430746	57430833	(75844476)	+	(GCCCCG)n	Simple_repeat	1	83	(0)	861301
15	19.9	3.6	3.5	chr12	57430880	57430934	(75844375)	+	G-rich	Low_complexity	1	57	(0)	861302
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	31.2	0.0	0.0	chr12	57431186	57431196	(75844113)	+	(CGCA)n	Simple_repeat	1	54	(0)	861304
12	34.2	0.0	1.7	chr12	57726605	57726664	(75548645)	+	(GGT)n	Simple_repeat	1	60	(0)	861754
15	20.4	0.0	2.4	chr12	58920321	58920361	(74354948)	+	(CGCTCG)n	Simple_repeat	1	41	(0)	863390
1565	23.4	6.8	0.9	chr12	63770192	63770466	(69504843)	C	MER110	LTR/ERV1	(16)	475	176	869899
3990	9.8	5.2	1.8	chr12	63770467	63771077	(69504232)	C	LTR10E	LTR/ERV1	(0)	633	1	869900
12	16.1	5.7	0.0	chr12	63844435	63844469	(69430840)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	870032
21	17.9	1.8	3.6	chr12	63844633	63844687	(69430622)	+	(TCC)n	Simple_repeat	1	56	(0)	870033
31	3.1	0.0	0.0	chr12	64404467	64404499	(68870810)	+	(GCG)n	Simple_repeat	1	33	(0)	871076
23	18.1	0.0	0.0	chr12	64404541	64404586	(68870723)	+	(CCTG)n	Simple_repeat	1	46	(0)	871077
20	22.8	0.0	7.3	chr12	66302344	66302425	(66972884)	+	(CCCCT)n	Simple_repeat	1	82	(0)	874171
18	4.8	0.0	0.0	chr12	66302986	66303007	(66972302)	+	(T)n	Simple_repeat	1	22	(0)	874172
16	30.0	0.0	0.0	chr12	67068824	67068868	(66206441)	+	(CC)n	Simple_repeat	1	45	(0)	875352
16	18.1	0.0	6.1	chr12	67068997	67069045	(66206264)	+	(CGGCCC)n	Simple_repeat	1	49	(0)	875353
33	22.6	2.6	4.2	chr12	67069306	67069422	(66205887)	+	G-rich	Low_complexity	1	120	(0)	875354
19	23.8	0.0	3.5	chr12	67069503	67069560	(66205749)	+	(CCT)n	Simple_repeat	1	58	(0)	875355
1186	30.3	7.5	3.3	chr12	67141650	67142137	(66133172)	+	L2a	LINE/L2	2917	3426	(0)	875472
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
270	34.0	5.8	4.0	chr12	68114018	68114219	(65161090)	+	L2b	LINE/L2	3221	3426	(0)	876890
23623	11.9	0.9	2.8	chr12	68244918	68247161	(65028148)	C	MER83A-int	LTR/ERV1	(2122)	2163	12	877065
13	16.8	0.0	5.4	chr12	68933059	68933095	(64342214)	+	(CCT)n	Simple_repeat	1	37	(0)	878376
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
19	6.1	5.7	0.0	chr12	69738825	69738859	(63536450)	+	(GCTCCCG)n	Simple_repeat	1	37	(0)	879832
18	18.5	8.2	0.0	chr12	69738860	69738884	(63536425)	+	(CGCTCCCG)n	Simple_repeat	2	66	(0)	879833
223	37.1	0.0	10.9	chr12	71754206	71754480	(61520829)	C	L2b	LINE/L2	(51)	3324	3080	882812
31	0.0	2.7	2.6	chr12	71755136	71755172	(61520137)	+	(GCG)n	Simple_repeat	1	38	(0)	882813
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
18	15.6	0.0	0.0	chr12	77325016	77325051	(55950258)	+	(CCGCTC)n	Simple_repeat	1	36	(0)	890696
30	10.0	0.0	5.1	chr12	79691010	79691068	(53584241)	+	GA-rich	Low_complexity	1	59	(0)	893882
12	15.3	5.3	2.5	chr12	79934885	79934922	(53340387)	+	(CGCTTC)n	Simple_repeat	1	40	(0)	894281
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
3570	11.7	2.5	1.2	chr12	85681209	85681783	(47593526)	+	LTR10C	LTR/ERV1	1	529	(62)	901965
5652	13.8	5.2	1.6	chr12	85681784	85682488	(47592821)	C	Tigger3b	DNA/TcMar-Tigger	(155)	1076	345	901963
760	14.0	0.0	0.0	chr12	93450945	93451044	(39824265)	C	AluJr	SINE/Alu	(212)	100	1	913458
4909	7.7	0.8	1.3	chr12	93451242	93451877	(39823432)	C	LTR10E	LTR/ERV1	(0)	633	1	913459
229	36.9	5.4	1.7	chr12	94101215	94101393	(39173916)	+	Tigger19a	DNA/TcMar-Tigger	27	212	(111)	914667
3593	12.8	2.4	1.2	chr12	94421828	94422411	(38852898)	+	LTR10C	LTR/ERV1	1	591	(0)	915178
465	12.3	0.0	0.0	chr12	94422428	94422492	(38852817)	C	Tigger3c	DNA/TcMar-Tigger	(498)	104	40	915177
12	16.8	10.6	0.0	chr12	94649867	94649913	(38625396)	+	(CCGCGCT)n	Simple_repeat	1	52	(0)	915565
19	24.0	0.0	5.6	chr12	94650284	94650355	(38624954)	+	(CCGC)n	Simple_repeat	1	67	(0)	915566
14	6.8	9.7	0.0	chr12	94650569	94650599	(38624710)	+	(CCG)n	Simple_repeat	1	34	(0)	915567
205	30.9	0.9	7.0	chr12	95943920	95944034	(37331275)	+	MER5A	DNA/hAT-Charlie	80	187	(2)	918161
1079	30.5	6.7	2.3	chr12	96788908	96789394	(36485915)	C	LTR79	LTR/ERVL	(17)	510	1	919699
450	22.3	0.8	4.7	chr12	98397148	98397274	(34878035)	+	L1ME3Cz	LINE/L1	109	230	(767)	922124
21	26.4	0.0	0.0	chr12	98397806	98397831	(34877478)	+	(AATTG)n	Simple_repeat	1	26	(0)	922125
2271	8.6	0.3	0.7	chr12	98397832	98398123	(34877186)	+	AluSx	SINE/Alu	2	292	(20)	922126
12	35.3	0.0	0.0	chr12	101876997	101877053	(31398256)	+	(CCCAC)n	Simple_repeat	1	57	(0)	928160
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
2893	8.1	2.3	0.3	chr12	104234656	104235037	(29040272)	+	HUERS-P3b-int	LTR/ERV1	1851	2240	(5178)	932142
1589	12.9	3.6	0.4	chr12	104235038	104235279	(29040030)	C	LTR10B1	LTR/ERV1	(0)	547	298	932143
487	16.3	14.6	0.8	chr12	104235345	104235474	(29039835)	C	LTR10B1	LTR/ERV1	(391)	156	6	932143
14	18.8	5.0	4.8	chr12	107760887	107760946	(25514363)	+	(GCCGCG)n	Simple_repeat	1	63	(0)	938825
13	11.7	3.6	0.0	chr12	107761083	107761110	(25514199)	+	(CCCGG)n	Simple_repeat	1	29	(0)	938826
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
14	24.0	4.1	0.0	chr12	114668105	114668153	(18607156)	+	G-rich	Low_complexity	1	51	(0)	954250
20	0.0	0.0	0.0	chr12	114668493	114668514	(18606795)	+	(A)n	Simple_repeat	1	22	(0)	954251
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
14	25.6	1.7	3.3	chr12	118104038	118104096	(15171213)	+	(GCCGG)n	Simple_repeat	1	60	(0)	961850
1098	13.3	21.6	2.0	chr12	120430351	120430456	(12844853)	+	AluJb	SINE/Alu	144	310	(2)	967053
236	17.7	9.0	4.1	chr12	120430689	120430762	(12844547)	C	L2a	LINE/L2	(15)	3372	3277	967056
2239	7.5	1.7	0.7	chr12	120430807	120431100	(12844209)	C	AluSc8	SINE/Alu	(14)	297	1	967057
180	35.5	5.0	0.3	chr12	120725590	120725688	(12549621)	+	L3b	LINE/CR1	3107	3180	(919)	967746
459	25.4	12.0	1.6	chr12	120726207	120726423	(12548886)	+	MIRb	SINE/MIR	12	262	(6)	967747
1704	11.7	8.4	2.1	chr12	121209583	121209753	(12065556)	C	AluJr	SINE/Alu	(1)	311	139	968857
28	0.0	0.0	0.0	chr12	121209754	121209780	(12065529)	+	(T)n	Simple_repeat	1	27	(0)	968858
1704	11.7	8.4	2.1	chr12	121209781	121209899	(12065410)	C	AluJr	SINE/Alu	(174)	138	1	968857
1901	13.1	0.3	1.4	chr12	121210498	121210794	(12064515)	+	AluJr	SINE/Alu	1	294	(18)	968859
262	20.3	9.2	0.0	chr12	121352050	121352108	(11923201)	+	L2b	LINE/L2	3305	3369	(6)	969184
31	0.0	0.0	0.0	chr12	121467301	121467329	(11807980)	+	(GGCTCG)n	Simple_repeat	1	29	(0)	969440
15	0.0	0.0	0.0	chr12	121537915	121537933	(11737376)	+	(CGG)n	Simple_repeat	1	19	(0)	969616
231	25.0	5.4	4.1	chr12	121538356	121538486	(11736823)	+	MIR3	SINE/MIR	10	138	(130)	969617
1723	6.8	0.0	0.0	chr12	121625754	121625960	(11649349)	+	AluSg	SINE/Alu	1	207	(103)	969868
313	25.6	4.3	4.3	chr12	121626044	121626137	(11649172)	+	L2a	LINE/L2	3324	3417	(9)	969865
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
463	33.8	2.9	3.9	chr12	121812309	121812514	(11462795)	+	MIRb	SINE/MIR	50	253	(15)	970364
18	18.8	6.5	1.5	chr12	122500541	122500611	(10774698)	+	(CGCCCT)n	Simple_repeat	1	74	(0)	972003
14	12.5	0.0	0.0	chr12	122500719	122500744	(10774565)	+	(TCG)n	Simple_repeat	1	26	(0)	972004
12	12.6	3.7	0.0	chr12	125185891	125185917	(8089392)	+	(CCCTC)n	Simple_repeat	1	28	(0)	977730
23	10.5	3.6	3.5	chr12	125186267	125186314	(8088995)	+	(GCCCCG)n	Simple_repeat	1	48	(0)	977731
44	2.1	2.1	0.0	chr12	125186315	125186362	(8088947)	+	(CTC)n	Simple_repeat	1	49	(0)	977732
21	9.4	0.0	0.0	chr12	125186369	125186402	(8088907)	+	(CGCT)n	Simple_repeat	1	34	(0)	977733
36	24.0	2.7	1.8	chr12	125186406	125186516	(8088793)	+	(GGC)n	Simple_repeat	1	114	(0)	977734
393	14.1	0.0	0.0	chr12	132189953	132190016	(1085293)	+	L1PA6	LINE/L1	6091	6154	(0)	989189
268	28.1	3.3	0.0	chr12	132190020	132190108	(1085201)	C	L1MD3	LINE/L1	(5)	7990	7899	989190
1631	17.3	3.2	0.4	chr12	132730541	132730817	(544492)	+	AluJo	SINE/Alu	1	285	(27)	989853
264	34.6	8.2	2.9	chr12	132761048	132761359	(513950)	+	L2	LINE/L2	2434	2763	(656)	989908
29	27.3	2.5	6.0	chr12	132761991	132762152	(513157)	+	(GCGG)n	Simple_repeat	1	166	(0)	989909
439	18.3	1.9	0.9	chr12	132762410	132762514	(512795)	+	AluJb	SINE/Alu	2	107	(205)	989910
291	7.7	0.0	0.0	chr12	132762515	132762553	(512756)	C	MADE1	DNA/TcMar-Mariner	(41)	39	1	989911
788	24.0	11.7	4.2	chr12	132829476	132829883	(445426)	C	L1MD	LINE/L1	(1498)	4648	4206	990002
21	6.4	0.0	2.9	chr12	132887158	132887192	(388117)	+	(CCCGGC)n	Simple_repeat	1	35	(0)	990111
632	17.8	10.6	0.0	chr12	132888328	132888445	(386864)	+	FLAM_C	SINE/Alu	1	132	(11)	990112
911	17.5	0.0	6.2	chr12	132956529	132956705	(318604)	C	AluJo	SINE/Alu	(10)	302	137	990230
506	27.5	6.3	1.3	chr12	132985913	132986063	(289246)	C	L1MB7	LINE/L1	(3665)	2550	2392	990290
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
22	3.8	0.0	0.0	chr12	133081345	133081371	(193938)	+	(AT)n	Simple_repeat	1	27	(0)	990481
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
3212	9.3	4.7	3.2	chr13	20565207	20565620	(93798708)	+	LTR10F	LTR/ERV1	88	509	(2)	994490
16	10.4	3.2	0.0	chr13	23375639	23375669	(90988659)	+	(CCGCC)n	Simple_repeat	1	32	(0)	998746
17	19.7	5.8	0.0	chr13	23375740	23375791	(90988537)	+	(CCGCC)n	Simple_repeat	1	55	(0)	998747
301	32.7	9.5	3.5	chr13	27006229	27006456	(87357872)	+	L2b	LINE/L2	3119	3361	(14)	1004151
21	20.9	4.9	8.1	chr13	27171732	27171873	(87192455)	+	(CGGCCCC)n	Simple_repeat	1	149	(0)	1004433
426	31.7	11.0	1.6	chr13	28658712	28658900	(85705428)	+	MIRc	SINE/MIR	58	266	(2)	1007119
15	15.7	0.0	5.1	chr13	28659275	28659313	(85705015)	+	(CGG)n	Simple_repeat	1	39	(0)	1007120
88	6.3	0.8	0.8	chr13	28819717	28819833	(85544495)	+	(GGCTGG)n	Simple_repeat	1	118	(0)	1007379
23	25.9	4.6	0.0	chr13	29850315	29850403	(84513925)	+	(CGCCTC)n	Simple_repeat	1	93	(0)	1008714
18	7.8	0.0	0.0	chr13	29850579	29850605	(84513723)	+	(GGC)n	Simple_repeat	1	27	(0)	1008715
21	17.5	0.0	2.1	chr13	30114788	30114834	(84249494)	+	(GCG)n	Simple_repeat	1	47	(0)	1009142
24	23.2	5.3	2.0	chr13	31199925	31200018	(83164310)	+	(GGC)n	Simple_repeat	1	99	(0)	1011022
21	24.9	3.2	4.2	chr13	31200242	31200334	(83163994)	+	(GCGCC)n	Simple_repeat	1	96	(0)	1011023
13	22.0	2.0	3.9	chr13	31200559	31200609	(83163719)	+	(CCCGCCC)n	Simple_repeat	1	52	(0)	1011024
18	0.0	0.0	0.0	chr13	36131374	36131396	(78232932)	+	(GGC)n	Simple_repeat	1	23	(0)	1018106
17	10.5	3.2	0.0	chr13	36131433	36131463	(78232865)	+	(CCT)n	Simple_repeat	1	32	(0)	1018107
15	18.3	0.0	2.6	chr13	40789604	40789642	(73574686)	+	(GAGCCG)n	Simple_repeat	1	39	(0)	1024731
30	3.1	0.0	0.0	chr13	48976583	48976615	(65387713)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	1037666
11	24.1	0.0	0.0	chr13	51453641	51453674	(62910654)	+	G-rich	Low_complexity	1	34	(0)	1041604
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
18	15.4	0.0	0.0	chr13	60213321	60213356	(54150972)	+	(AATAGT)n	Simple_repeat	1	36	(0)	1053181
34	17.6	6.6	1.8	chr13	60397601	60397706	(53966622)	+	(GGCGGCG)n	Simple_repeat	1	113	(0)	1053464
2453	26.9	8.8	5.0	chr13	62473681	62474693	(51889635)	+	L1M3d	LINE/L1	27	1081	(4810)	1056057
15223	10.0	2.8	1.1	chr13	64119798	64121618	(50242710)	C	L1PA5	LINE/L1	(4320)	1864	4	1058147
257	27.3	11.5	1.8	chr13	65034257	65034420	(49329908)	C	MER52A	LTR/ERV1	(2)	1753	1572	1059252
1030	25.7	6.6	2.9	chr13	65343070	65343403	(49020925)	C	LTR52	LTR/ERVL	(44)	377	26	1059686
8201	11.1	1.9	3.0	chr13	65466269	65467875	(48896453)	C	L1PA7	LINE/L1	(4679)	1820	323	1059848
476	19.5	0.0	0.0	chr13	65829317	65829403	(48534925)	+	MER52D	LTR/ERV1	1	87	(1668)	1060266
4756	23.3	11.2	4.2	chr13	65829403	65830815	(48533513)	+	MER52D	LTR/ERV1	601	2123	(0)	1060266
21047	12.3	3.9	2.9	chr13	66613713	66614679	(47749649)	+	MER61-int	LTR/ERV1	1655	2459	(2758)	1061253
4846	4.2	0.3	0.2	chr13	66614680	66615269	(47749059)	C	LTR10C	LTR/ERV1	(0)	591	1	1061254
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
8715	12.5	8.6	4.1	chr13	67771971	67773473	(46590855)	C	LTR12C	LTR/ERV1	(0)	1579	3	1062702
491	33.5	9.4	4.8	chr13	67773474	67773905	(46590423)	+	ERVL-int	LTR/ERVL	3505	3952	(1702)	1062701
16	33.7	0.0	0.0	chr13	71865169	71865221	(42499107)	+	(CA)n	Simple_repeat	1	53	(0)	1068014
18	20.1	4.2	2.0	chr13	71865798	71865845	(42498483)	+	(CG)n	Simple_repeat	1	50	(0)	1068015
13	26.4	0.0	3.8	chr13	71867035	71867087	(42497241)	+	G-rich	Low_complexity	1	53	(0)	1068021
7616	23.6	3.2	7.5	chr13	72219942	72222100	(42142228)	C	L1MA4A	LINE/L1	(4775)	2074	11	1068503
18	15.0	2.7	0.0	chr13	72373828	72373864	(41990464)	+	(TTG)n	Simple_repeat	1	38	(0)	1068699
235	35.9	0.7	6.6	chr13	72373874	72374025	(41990303)	C	L1MA8	LINE/L1	(5991)	150	8	1068698
322	22.5	8.0	11.0	chr13	72726685	72726839	(41637489)	C	MIRb	SINE/MIR	(58)	210	61	1069241
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
18	8.7	0.0	0.0	chr13	74133796	74133820	(40230508)	+	(CT)n	Simple_repeat	1	25	(0)	1071554
25	26.0	0.0	2.9	chr13	74133820	74133889	(40230439)	+	(CA)n	Simple_repeat	1	70	(0)	1071555
19	12.4	0.0	0.0	chr13	74134159	74134193	(40230135)	+	(TGGGG)n	Simple_repeat	1	35	(0)	1071556
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
25	26.4	3.1	2.0	chr13	74134473	74134570	(40229758)	+	(CCCGC)n	Simple_repeat	1	101	(0)	1071558
14	12.8	5.9	0.0	chr13	74135691	74135724	(40228604)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1071559
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
34	6.7	2.1	0.0	chr13	76886255	76886302	(37478026)	+	(CGC)n	Simple_repeat	1	49	(0)	1075376
12	15.5	3.5	0.0	chr13	76886311	76886339	(37477989)	+	(GAGCG)n	Simple_repeat	1	30	(0)	1075377
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
16	4.3	0.0	3.9	chr13	77329420	77329445	(37034883)	+	(CTC)n	Simple_repeat	1	26	(0)	1076038
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
7292	10.2	8.8	1.6	chr13	83516768	83517929	(30846399)	+	LTR12D	LTR/ERV1	1	1254	(0)	1084079
17836	5.5	0.4	0.1	chr13	84869737	84871933	(29492395)	+	HERVK14C-int	LTR/ERVK	1	2202	(5232)	1085796
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
14	14.3	8.3	1.9	chr13	98142728	98142775	(16221553)	+	(CCCGCTCT)n	Simple_repeat	1	52	(0)	1104173
17	10.8	7.5	0.0	chr13	98142939	98142978	(16221350)	+	(CGGAG)n	Simple_repeat	1	43	(0)	1104174
15	19.9	4.8	4.5	chr13	98143122	98143184	(16221144)	+	(GGCGG)n	Simple_repeat	1	66	(0)	1104175
4965	3.6	0.3	0.0	chr13	100229302	100229890	(14134438)	+	LTR10C	LTR/ERV1	1	591	(0)	1107632
15	22.1	3.6	3.5	chr13	110307028	110307083	(4057245)	+	(GGC)n	Simple_repeat	1	58	(0)	1121126
17	18.8	5.4	1.7	chr13	110705974	110706029	(3658299)	+	(CCGCCCG)n	Simple_repeat	1	59	(0)	1121626
17	14.6	4.1	3.9	chr13	110706167	110706215	(3658113)	+	(CACGCC)n	Simple_repeat	1	51	(0)	1121627
2277	3.6	3.1	6.2	chr14	20342727	20343030	(86700688)	C	AluY	SINE/Alu	(17)	294	1	1127886
22	3.8	0.0	0.0	chr14	20343033	20343065	(86700653)	+	(T)n	Simple_repeat	1	33	(0)	1127887
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
576	25.5	1.3	6.3	chr14	22957344	22957410	(84086308)	C	MIRb	SINE/MIR	(9)	259	197	1132035
2406	5.5	0.7	0.0	chr14	22957411	22957699	(84086019)	C	AluY	SINE/Alu	(20)	291	1	1132036
13	23.2	7.5	1.4	chr14	23301599	23301665	(83742053)	+	(GGAAGGC)n	Simple_repeat	1	72	(0)	1132659
2091	9.5	0.0	1.8	chr14	24093397	24093680	(82950038)	+	AluSx3	SINE/Alu	1	279	(32)	1133740
14	18.4	2.1	4.2	chr14	24141475	24141521	(82902197)	+	(GCCCCCG)n	Simple_repeat	1	48	(0)	1133811
344	36.1	4.0	11.4	chr14	24271824	24272443	(82771275)	+	L2	LINE/L2	1962	2533	(886)	1134000
382	24.0	18.4	1.4	chr14	31420929	31421076	(75622642)	C	MIR3	SINE/MIR	(18)	190	12	1143608
1423	22.0	9.4	4.9	chr14	31421090	31421728	(75621990)	C	L1MC4	LINE/L1	(1)	7881	7222	1143609
23	26.6	2.1	3.1	chr14	32939778	32939872	(74103846)	+	G-rich	Low_complexity	1	97	(0)	1145784
17	11.7	0.0	7.0	chr14	34462042	34462084	(72581634)	+	(CCCGCG)n	Simple_repeat	1	43	(0)	1147842
11	6.3	11.4	2.6	chr14	34462178	34462212	(72581506)	+	(CCAGCG)n	Simple_repeat	1	39	(0)	1147843
35	21.7	3.9	6.2	chr14	34462243	34462398	(72581320)	+	(CCGC)n	Simple_repeat	1	162	(0)	1147844
200	36.1	3.6	2.2	chr14	34462625	34462760	(72580958)	C	L2a	LINE/L2	(12)	3414	3277	1147845
13	8.5	0.0	3.7	chr14	35826847	35826873	(71216845)	+	(CGGGG)n	Simple_repeat	1	27	(0)	1150696
16	15.3	0.0	2.6	chr14	39102972	39103024	(67940694)	+	(CCCCAGC)n	Simple_repeat	1	51	(0)	1155115
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
20	25.8	0.0	4.3	chr14	49767563	49767632	(57276086)	+	(CGG)n	Simple_repeat	1	70	(0)	1168591
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
37	17.0	1.2	2.4	chr14	52951228	52951310	(54092408)	+	G-rich	Low_complexity	1	84	(0)	1173829
12	16.9	2.9	2.8	chr14	53153332	53153366	(53890352)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1174114
2658	19.6	12.8	7.7	chr14	53183129	53183929	(53859789)	+	MER21C	LTR/ERVL	9	931	(7)	1174166
471	29.1	2.5	12.5	chr14	53183938	53183956	(53859762)	C	Charlie18a	DNA/hAT-Charlie	(1)	341	327	1174167
5112	5.0	0.8	0.0	chr14	53183957	53184540	(53859178)	C	LTR10C	LTR/ERV1	(0)	591	3	1174168
9955	12.4	2.4	7.7	chr14	53216383	53218049	(53825669)	C	LTR12C	LTR/ERV1	(0)	1579	3	1174241
25908	3.5	0.3	0.1	chr14	54233878	54240023	(52803695)	+	L1PA3	LINE/L1	1	6152	(3)	1175632
19	15.1	5.7	1.8	chr14	54240024	54240076	(52803642)	+	A-rich	Low_complexity	1	56	(0)	1175633
19	15.5	3.7	3.6	chr14	55271644	55271697	(51772021)	+	G-rich	Low_complexity	1	56	(0)	1177395
26	25.4	1.1	3.3	chr14	58152093	58152181	(48891537)	+	(GCG)n	Simple_repeat	1	90	(0)	1181702
13	21.4	4.7	0.0	chr14	58152310	58152352	(48891366)	+	(GCCCAC)n	Simple_repeat	1	45	(0)	1181703
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
468	20.7	0.0	0.0	chr14	60165538	60165624	(46878094)	+	AluSz	SINE/Alu	48	134	(178)	1184650
15	24.0	0.0	0.0	chr14	60657425	60657437	(46386281)	+	A-rich	Low_complexity	1	38	(0)	1185333
13	8.5	4.0	0.0	chr14	60657438	60657462	(46386256)	+	(AAGA)n	Simple_repeat	1	26	(0)	1185334
15	25.1	4.9	0.0	chr14	63852902	63852962	(43190756)	+	G-rich	Low_complexity	1	64	(0)	1190225
15	31.8	0.0	0.0	chr14	63853205	63853262	(43190456)	+	G-rich	Low_complexity	1	58	(0)	1190226
933	14.2	1.9	0.7	chr14	67600452	67600606	(39443112)	+	AluJb	SINE/Alu	134	290	(22)	1196382
4170	7.8	5.0	9.6	chr14	68865178	68865842	(38177876)	+	LTR10E	LTR/ERV1	1	633	(0)	1198402
393	26.4	16.8	1.2	chr14	68865947	68866107	(38177611)	+	MLT1K	LTR/ERVL-MaLR	335	525	(70)	1198403
13	11.0	0.0	6.1	chr14	71320402	71320434	(35723284)	+	G-rich	Low_complexity	1	33	(0)	1202618
14	19.5	0.0	2.7	chr14	71320464	71320500	(35723218)	+	(GTGA)n	Simple_repeat	1	37	(0)	1202619
14	22.0	3.6	3.5	chr14	71320800	71320855	(35722863)	+	G-rich	Low_complexity	1	58	(0)	1202620
16	24.8	0.0	3.6	chr14	71321008	71321016	(35722702)	+	(GCCGCTC)n	Simple_repeat	1	51	(0)	1202621
16	7.6	11.9	0.0	chr14	71321017	71321058	(35722660)	+	(CGCTCGG)n	Simple_repeat	1	47	(0)	1202622
23	16.3	0.0	2.0	chr14	74493501	74493550	(32550168)	+	(CCCGC)n	Simple_repeat	1	50	(0)	1208642
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
13	21.2	2.6	0.0	chr14	77376502	77376539	(29667179)	+	(GGATGG)n	Simple_repeat	1	39	(0)	1214086
18	28.3	1.0	5.9	chr14	91510623	91510722	(15532996)	+	(CGGCCC)n	Simple_repeat	1	101	(0)	1235829
12	17.2	4.9	2.3	chr14	94769800	94769840	(12273878)	+	(CGCGGCCG)n	Simple_repeat	1	43	(0)	1241774
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
2113	12.8	0.6	4.8	chr14	99677947	99678300	(7365418)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1250417
3930	10.4	1.7	2.0	chr14	99678328	99678941	(7364777)	C	LTR10E	LTR/ERV1	(0)	609	1	1250418
20	25.4	2.7	6.2	chr14	99971306	99971415	(7072303)	+	(CCGCCC)n	Simple_repeat	1	113	(0)	1250931
264	28.9	7.5	0.0	chr14	100214710	100214844	(6828874)	C	MIR3	SINE/MIR	(52)	156	11	1251448
14	11.7	0.0	3.3	chr14	103075814	103075843	(3967875)	+	(CCGCT)n	Simple_repeat	1	30	(0)	1256158
12	18.8	2.6	2.6	chr14	103075866	103075903	(3967815)	+	(CCGCAG)n	Simple_repeat	1	39	(0)	1256159
2297	7.9	0.6	2.5	chr14	103075955	103076272	(3967446)	+	AluSx1	SINE/Alu	1	312	(0)	1256160
13	26.6	2.9	4.3	chr14	104753024	104753091	(2290627)	+	(CCGCG)n	Simple_repeat	1	70	(0)	1258777
31	15.8	0.0	7.8	chr14	105021289	105021378	(2022340)	+	(GCCCC)n	Simple_repeat	1	90	(0)	1259101
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
351	15.2	24.0	0.0	chr15	23039047	23039138	(78952051)	C	AluJo	SINE/Alu	(191)	121	1	1266779
19	19.1	5.8	2.7	chr15	40405829	40405897	(61585292)	+	(TGGCGGC)n	Simple_repeat	1	73	(0)	1291144
20	8.6	5.4	0.0	chr15	47717493	47717529	(54273660)	+	(TGC)n	Simple_repeat	1	39	(0)	1303776
30	15.3	1.7	0.0	chr15	55993613	55993670	(45997519)	+	GA-rich	Low_complexity	1	59	(0)	1316534
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
16	9.9	0.0	5.6	chr15	62390426	62390476	(39600713)	+	(GCCGC)n	Simple_repeat	1	48	(0)	1326828
14	22.0	2.0	3.9	chr15	62390511	62390561	(39600628)	+	(CGCGCT)n	Simple_repeat	1	52	(0)	1326829
17	23.3	0.0	0.0	chr15	62390560	62390604	(39600585)	+	(CGGCGG)n	Simple_repeat	1	45	(0)	1326830
20	23.1	0.0	3.3	chr15	63121643	63121702	(38869487)	+	GA-rich	Low_complexity	1	60	(0)	1327996
11	21.6	9.3	0.0	chr15	63121768	63121821	(38869368)	+	(CCGCGCC)n	Simple_repeat	1	59	(0)	1327997
17	22.7	1.9	1.8	chr15	63121977	63122030	(38869159)	+	G-rich	Low_complexity	1	55	(0)	1327998
203	24.3	11.4	0.0	chr15	64046694	64046763	(37944426)	+	MIR	SINE/MIR	61	139	(123)	1329648
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
12	12.2	3.7	0.0	chr15	66387261	66387287	(35603902)	+	(GCGCA)n	Simple_repeat	1	28	(0)	1334598
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
19	19.5	3.1	8.1	chr15	68818107	68818202	(33172987)	+	(CCGCGCC)n	Simple_repeat	1	99	(0)	1339116
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
13	19.4	0.0	2.7	chr15	68818818	68818854	(33172335)	+	(CCCCCA)n	Simple_repeat	1	37	(0)	1339118
14	4.3	4.2	0.0	chr15	70158486	70158509	(31832680)	+	(CTCC)n	Simple_repeat	1	25	(0)	1341585
1581	21.1	10.5	1.6	chr15	70158672	70159123	(31832066)	+	MLT1D	LTR/ERVL-MaLR	9	505	(0)	1341586
18	30.1	0.0	1.6	chr15	72117939	72118001	(29873188)	+	(CCG)n	Simple_repeat	1	63	(0)	1344929
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
13	19.2	0.0	0.0	chr15	74433572	74433601	(27557588)	+	(ACAC)n	Simple_repeat	1	30	(0)	1348810
19	12.0	2.8	0.0	chr15	74433806	74433841	(27557348)	+	(CAG)n	Simple_repeat	1	37	(0)	1348811
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
19	21.5	1.5	4.5	chr15	74956809	74956873	(27034316)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1349865
14	10.3	3.0	2.9	chr15	74956911	74956943	(27034246)	+	G-rich	Low_complexity	1	34	(0)	1349866
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
16	23.9	0.0	0.0	chr15	75201839	75201873	(26789316)	+	(C)n	Simple_repeat	1	35	(0)	1350396
20	13.2	0.0	4.4	chr15	75201874	75201881	(26789308)	+	(CGCCC)n	Simple_repeat	3	45	(0)	1350397
12	18.9	7.1	0.0	chr15	75738638	75738679	(26252510)	+	(GCCCCA)n	Simple_repeat	1	45	(0)	1351436
13	21.9	2.0	3.9	chr15	77419740	77419790	(24571399)	+	G-rich	Low_complexity	1	52	(0)	1354017
14	4.0	7.7	0.0	chr15	77420098	77420123	(24571066)	+	(ACTA)n	Simple_repeat	1	28	(0)	1354018
30	26.2	1.9	1.9	chr15	77420146	77420248	(24570941)	+	(CGCC)n	Simple_repeat	1	105	(0)	1354019
20	28.1	5.2	0.0	chr15	77420206	77420282	(24570907)	+	(CG)n	Simple_repeat	1	81	(0)	1354020
316	19.3	9.7	0.0	chr15	77870754	77870880	(24120309)	C	MIRb	SINE/MIR	(50)	218	77	1354822
2188	17.1	3.1	1.0	chr15	79576891	79577273	(22413916)	C	MSTC	LTR/ERVL-MaLR	(1)	427	37	1358059
4886	7.4	0.3	0.5	chr15	79915868	79916501	(22074688)	C	LTR10E	LTR/ERV1	(0)	633	1	1358593
2146	15.9	5.7	7.8	chr15	79919647	79920169	(22071020)	C	HERVIP10FH-int	LTR/ERV1	(4395)	707	24	1358595
4693	7.9	2.2	0.3	chr15	79920194	79920814	(22070375)	C	LTR10E	LTR/ERV1	(0)	633	1	1358595
14	5.0	0.0	0.0	chr15	81001815	81001835	(20989354)	+	(AAGG)n	Simple_repeat	1	21	(0)	1360520
13	13.1	2.7	5.3	chr15	82952719	82952755	(19038434)	+	(GCGG)n	Simple_repeat	1	38	(0)	1363737
341	14.3	0.0	1.8	chr15	83067477	83067533	(18923656)	C	MER5A	DNA/hAT-Charlie	(75)	114	59	1363979
28	27.7	3.5	2.5	chr15	83898295	83898410	(18092779)	+	GA-rich	Low_complexity	1	120	(0)	1365317
288	37.3	16.4	1.6	chr15	83898554	83898858	(18092331)	C	L3	LINE/CR1	(3285)	814	456	1365318
28	3.3	0.0	0.0	chr15	84571038	84571068	(17420121)	+	(CCCTCAC)n	Simple_repeat	1	31	(0)	1366184
49	0.0	0.0	0.0	chr15	84571275	84571316	(17419873)	+	(GT)n	Simple_repeat	1	42	(0)	1366185
594	20.8	3.0	3.0	chr15	84588332	84588465	(17402724)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	1366227
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
2392	6.5	0.7	0.3	chr15	89012066	89012358	(12978831)	+	AluY	SINE/Alu	4	297	(14)	1373461
4646	5.2	2.2	2.7	chr15	89012359	89012613	(12978576)	+	LTR10C	LTR/ERV1	348	591	(0)	1373460
2150	13.8	0.0	0.0	chr15	89012790	89013085	(12978104)	+	AluSx	SINE/Alu	1	296	(16)	1373462
59	9.1	0.0	0.0	chr15	89776890	89776973	(12214216)	+	(AGGGGC)n	Simple_repeat	1	84	(0)	1374860
12	15.4	3.3	9.5	chr15	90388176	90388236	(11602953)	+	G-rich	Low_complexity	1	63	(0)	1376268
225	25.6	8.8	0.8	chr15	90388822	90388917	(11602272)	+	MIR3	SINE/MIR	45	140	(128)	1376269
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
3144	15.3	3.8	4.8	chr15	92949736	92950354	(9040835)	C	LTR10E	LTR/ERV1	(21)	612	1	1380799
277	30.3	2.7	8.8	chr15	94070431	94070669	(7920520)	C	AmnSINE1	SINE/5S-Deu-L2	(5)	570	347	1382584
15	16.8	0.0	2.8	chr15	99015203	99015238	(2975951)	+	(GCCTCG)n	Simple_repeat	1	36	(0)	1389443
35	6.8	0.0	0.0	chr15	99733363	99733408	(2257781)	+	(CCGCGAC)n	Simple_repeat	1	46	(0)	1390511
16	0.0	0.0	11.4	chr15	99733556	99733590	(2257599)	+	(CGGGG)n	Simple_repeat	1	35	(0)	1390512
2521	26.5	7.7	1.8	chr15	99755502	99756128	(2235061)	C	LTR41B	LTR/ERVL	(73)	685	9	1390567
2676	14.3	6.3	10.3	chr15	100172320	100172935	(1818254)	+	LTR10A	LTR/ERV1	1	633	(0)	1391102
24	11.2	0.0	0.0	chr15	101489758	101489796	(501393)	+	(CGC)n	Simple_repeat	1	39	(0)	1392850
12	23.5	2.5	0.0	chr15	101489835	101489874	(501315)	+	G-rich	Low_complexity	1	41	(0)	1392851
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
26	0.0	0.0	0.0	chr15	101724604	101724628	(266561)	+	(GGGGC)n	Simple_repeat	1	25	(0)	1393181
5212	12.1	22.1	0.7	chr15	101979520	101980763	(10426)	+	TAR1	Satellite/telo	483	2068	(43)	1393518
328	3.1	1.9	3.2	chr15	101980765	101981189	(10000)	+	(GGTTAG)n	Simple_repeat	1	433	(0)	1393519
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
547	17.9	20.9	2.6	chr16	2205007	2205161	(88133184)	+	MER53	DNA/hAT	3	193	(0)	1397036
13	27.1	0.0	2.1	chr16	2205516	2205562	(88132783)	+	G-rich	Low_complexity	1	47	(0)	1397037
226	28.8	13.6	0.0	chr16	2205831	2205972	(88132373)	+	MIRc	SINE/MIR	11	185	(83)	1397038
17	15.3	2.7	0.0	chr16	2251462	2251498	(88086847)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	1397109
19	23.5	2.9	2.9	chr16	3020314	3020381	(87317964)	+	(GGC)n	Simple_repeat	1	70	(0)	1398343
11	7.0	0.0	12.8	chr16	3020504	3020542	(87317803)	+	G-rich	Low_complexity	1	39	(0)	1398344
14	22.7	0.0	2.3	chr16	4253899	4253941	(86084404)	+	G-rich	Low_complexity	1	43	(0)	1400765
359	23.4	17.6	1.3	chr16	4254280	4254435	(86083910)	+	L1ME1	LINE/L1	5875	6061	(118)	1400766
1014	26.2	9.4	2.2	chr16	5034049	5034500	(85303845)	C	L1MC4	LINE/L1	(0)	8042	7555	1402426
21	12.2	2.1	4.1	chr16	5071862	5071909	(85266436)	+	(TGC)n	Simple_repeat	1	49	(0)	1402509
584	25.0	1.2	1.8	chr16	19068099	19068261	(71270084)	+	MER5A1	DNA/hAT-Charlie	1	162	(4)	1432610
14	24.8	0.0	7.6	chr16	21301409	21301474	(69036871)	+	G-rich	Low_complexity	1	66	(0)	1437615
15	12.0	0.0	0.0	chr16	21301852	21301878	(69036467)	+	(GCG)n	Simple_repeat	1	27	(0)	1437616
24	6.8	0.0	0.0	chr16	21302071	21302101	(69036244)	+	(AC)n	Simple_repeat	1	31	(0)	1437617
17	17.4	3.5	5.1	chr16	23149397	23149453	(67188892)	+	(AGCG)n	Simple_repeat	1	59	(0)	1441521
27	5.1	2.3	2.3	chr16	23150002	23150044	(67188301)	+	(TCAT)n	Simple_repeat	1	44	(0)	1441522
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
378	32.1	1.2	12.0	chr16	30021886	30021966	(60316379)	+	MIR	SINE/MIR	83	154	(108)	1457091
2351	9.7	1.0	0.3	chr16	30021967	30022276	(60316069)	+	AluSx	SINE/Alu	1	312	(0)	1457092
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
1422	20.6	1.7	1.6	chr16	30096876	30097207	(60241138)	+	LTR10B2	LTR/ERV1	187	503	(0)	1457253
11309	12.1	2.7	1.0	chr16	30097209	30099040	(60239305)	+	HERVIP10B3-int	LTR/ERV1	1	1864	(5739)	1457253
501	26.2	9.7	1.5	chr16	30406862	30407082	(59931263)	+	MIRb	SINE/MIR	12	254	(14)	1457954
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
193	28.0	3.9	0.0	chr16	30806098	30806172	(59532173)	C	MIR3	SINE/MIR	(106)	102	25	1458896
380	23.9	7.4	6.1	chr16	30813968	30814115	(59524230)	C	MIR3	SINE/MIR	(23)	185	33	1458924
23	9.1	0.0	0.0	chr16	30814728	30814763	(59523582)	+	(TTCC)n	Simple_repeat	1	36	(0)	1458925
1619	16.4	7.4	0.0	chr16	30814766	30815052	(59523293)	C	AluSg	SINE/Alu	(0)	310	1	1458926
210	31.6	7.3	5.8	chr16	30956924	30957044	(59381301)	+	MIR1_Amn	SINE/MIR	31	153	(77)	1459288
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
318	21.8	0.0	0.0	chr16	34066270	34066324	(56272021)	+	AluYj4	SINE/Alu	224	278	(33)	1463572
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
276	18.3	11.2	2.7	chr16	48366161	48366233	(41972112)	C	MADE2	DNA/TcMar-Mariner	(0)	80	1	1468610
484	28.1	8.4	1.0	chr16	48609477	48609674	(41728671)	C	MIR	SINE/MIR	(33)	229	16	1469088
12	22.8	5.0	6.0	chr16	48609688	48609767	(41728578)	+	G-rich	Low_complexity	1	84	(0)	1469089
17	20.8	0.0	4.2	chr16	48609973	48610020	(41728325)	+	(GGC)n	Simple_repeat	1	48	(0)	1469090
16	15.6	0.0	2.6	chr16	48610075	48610112	(41728233)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	1469091
21	23.1	3.3	0.0	chr16	51151701	51151761	(39186584)	+	(CCCT)n	Simple_repeat	1	63	(0)	1473829
294	37.6	3.0	0.0	chr16	56576867	56577028	(33761317)	+	L3	LINE/CR1	3784	3950	(149)	1483332
7455	10.4	7.0	6.0	chr16	75121424	75122025	(15216320)	+	MER4-int	LTR/ERV1	1765	2429	(4169)	1516122
3145	15.1	2.6	3.2	chr16	75122029	75122601	(15215744)	C	LTR10A	LTR/ERV1	(65)	544	1	1516127
15719	14.4	3.1	4.0	chr16	75433679	75434907	(14903438)	+	Tigger17	DNA/TcMar-Tigger	1	1199	(1474)	1516787
1299	5.2	0.0	0.0	chr16	79052416	79052570	(11285775)	+	L1PA2	LINE/L1	5626	5780	(375)	1522885
2207	6.9	0.7	0.0	chr16	79052571	79052844	(11285501)	+	LTR10C	LTR/ERV1	316	591	(0)	1522884
12	21.3	2.5	2.4	chr16	87383530	87383569	(2954776)	+	(GGC)n	Simple_repeat	1	41	(0)	1538339
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
1170	16.9	14.7	0.0	chr16	87384639	87384881	(2953464)	+	AluJr	SINE/Alu	20	304	(8)	1538341
3051	7.1	0.7	0.0	chr16	87816884	87817307	(2521038)	+	MER41A	LTR/ERV1	1	427	(127)	1539133
599	19.3	0.0	0.9	chr16	87817308	87817417	(2520928)	C	AluSx	SINE/Alu	(1)	311	203	1539134
1038	16.3	1.4	3.6	chr16	87817430	87817652	(2520693)	+	LTR10C	LTR/ERV1	368	585	(6)	1539135
1530	11.5	0.0	0.0	chr16	87817666	87817873	(2520472)	C	AluSx	SINE/Alu	(104)	208	1	1539134
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
719	11.3	0.9	0.8	chr16	89817057	89817172	(521173)	+	FLAM_C	SINE/Alu	6	117	(16)	1541909
2513	6.7	0.0	0.6	chr16	89817173	89817485	(520860)	C	AluSx	SINE/Alu	(0)	312	2	1541910
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
2298	8.9	1.0	1.0	chr17	879301	879586	(82377855)	C	AluSx1	SINE/Alu	(23)	289	1	1545955
33	0.0	0.0	0.0	chr17	1400607	1400637	(81856804)	+	(TTTTCTT)n	Simple_repeat	1	31	(0)	1547031
2107	8.5	1.4	0.7	chr17	1400638	1400918	(81856523)	C	AluSq	SINE/Alu	(30)	283	1	1547032
14	8.2	3.9	0.0	chr17	4142924	4142949	(79114492)	+	(GCC)n	Simple_repeat	1	27	(0)	1552422
16	19.6	5.6	1.8	chr17	4710664	4710717	(78546724)	+	(AGCG)n	Simple_repeat	1	57	(0)	1553589
12	19.7	2.3	4.4	chr17	4710763	4710806	(78546635)	+	G-rich	Low_complexity	1	45	(0)	1553590
362	30.8	4.0	4.0	chr17	4806461	4806609	(78450832)	+	L2c	LINE/L2	3238	3386	(1)	1553826
23	23.2	4.5	2.1	chr17	4807086	4807219	(78450222)	+	(GCCCCG)n	Simple_repeat	1	137	(0)	1553827
27	23.3	6.0	3.5	chr17	4997900	4998033	(78259408)	+	(CCCGCCG)n	Simple_repeat	1	142	(0)	1554195
242	25.7	1.4	0.0	chr17	5281840	5281909	(77975532)	C	MIRc	SINE/MIR	(144)	124	54	1554824
13	15.9	2.6	5.0	chr17	7014818	7014856	(76242585)	+	(GCG)n	Simple_repeat	1	40	(0)	1558088
17	26.0	4.1	1.9	chr17	7014959	7015034	(76242407)	+	G-rich	Low_complexity	1	77	(0)	1558089
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
2406	8.2	1.0	0.0	chr17	8247306	8247608	(75009833)	C	AluSz	SINE/Alu	(6)	306	1	1560402
222	20.0	0.0	0.0	chr17	11997717	11997761	(71259680)	C	MIRb	SINE/MIR	(14)	254	210	1567386
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
17	19.8	1.7	6.6	chr17	12789616	12789675	(70467766)	+	(GCG)n	Simple_repeat	1	61	(0)	1568664
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
1057	9.0	0.0	0.0	chr17	16589595	16589727	(66667714)	C	AluSq10	SINE/Alu	(180)	133	1	1575259
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
13	8.1	0.0	6.7	chr17	17782016	17782045	(65475396)	+	(GGGA)n	Simple_repeat	1	30	(0)	1577343
12	12.5	0.0	3.6	chr17	17782235	17782262	(65475179)	+	(GGCG)n	Simple_repeat	1	28	(0)	1577344
17	22.4	6.6	2.5	chr17	21042840	21042924	(62214517)	+	(CGG)n	Simple_repeat	1	88	(0)	1583516
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1311	24.3	4.4	1.0	chr17	26947601	26948016	(56309425)	+	MER54A	LTR/ERVL	1	431	(470)	1586012
2079	11.4	7.0	1.5	chr17	26948054	26948391	(56309050)	C	THE1B	LTR/ERVL-MaLR	(0)	364	7	1586013
289	20.0	1.6	0.0	chr17	26963408	26963467	(56293974)	C	MIR3	SINE/MIR	(53)	155	95	1586030
22	15.1	2.3	0.0	chr17	28644934	28644977	(54612464)	+	(CCG)n	Simple_repeat	1	45	(0)	1589064
14	29.9	0.0	6.1	chr17	28645063	28645144	(54612297)	+	(CCCGG)n	Simple_repeat	1	82	(0)	1589065
26	19.0	2.3	5.6	chr17	28710974	28711060	(54546381)	+	G-rich	Low_complexity	1	89	(0)	1589185
13	15.2	0.0	3.2	chr17	28744082	28744112	(54513329)	+	(CCCG)n	Simple_repeat	1	31	(0)	1589232
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
20	20.7	0.0	0.0	chr17	29390817	29390855	(53866586)	+	(C)n	Simple_repeat	1	39	(0)	1590556
15	11.6	0.0	3.3	chr17	29390924	29390953	(53866488)	+	(CCT)n	Simple_repeat	1	30	(0)	1590557
18	23.6	2.2	6.5	chr17	29930050	29930066	(53327375)	+	G-rich	Low_complexity	1	87	(0)	1591635
17	26.2	4.4	0.0	chr17	29930067	29930134	(53327307)	+	(GGAGCGG)n	Simple_repeat	1	71	(0)	1591636
2135	7.1	0.0	9.9	chr17	31067200	31067522	(52189919)	C	AluSc	SINE/Alu	(18)	291	1	1593934
23	18.9	3.5	5.6	chr17	31095059	31095145	(52162296)	+	(CCCCCT)n	Simple_repeat	1	90	(0)	1593994
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
25	21.1	5.3	0.0	chr17	34980634	34980709	(48276732)	+	(CGCGG)n	Simple_repeat	1	80	(0)	1601461
332	26.6	5.0	7.4	chr17	34981367	34981488	(48275953)	C	Charlie4z	DNA/hAT-Charlie	(2)	165	47	1601462
17	20.9	0.0	2.2	chr17	36545250	36545295	(46712146)	+	G-rich	Low_complexity	1	46	(0)	1604133
29	14.9	0.0	7.7	chr17	36545398	36545475	(46711966)	+	(GGCG)n	Simple_repeat	1	78	(0)	1604134
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
14	28.6	0.0	0.0	chr17	37489978	37490024	(45767417)	+	G-rich	Low_complexity	1	47	(0)	1605976
2180	19.3	3.4	6.7	chr17	39046748	39047258	(44210183)	+	LTR10E	LTR/ERV1	115	608	(25)	1609191
2350	10.2	1.3	0.0	chr17	39047286	39047588	(44209853)	+	AluSx	SINE/Alu	1	307	(5)	1609192
14	14.9	5.4	0.0	chr17	40191503	40191539	(43065902)	+	(GGCCGGA)n	Simple_repeat	1	39	(0)	1611532
305	28.3	7.5	0.0	chr17	40191740	40191838	(43065603)	C	MER91A	DNA/hAT-Tip100	(0)	196	90	1611533
235	27.5	9.8	8.0	chr17	40191843	40191992	(43065449)	C	MER91A	DNA/hAT-Tip100	(25)	171	19	1611534
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
13	18.9	0.0	0.0	chr17	44363653	44363682	(38893759)	+	(AGC)n	Simple_repeat	1	30	(0)	1619784
24	19.9	4.2	5.0	chr17	44363747	44363841	(38893600)	+	(GCTCCC)n	Simple_repeat	1	99	(0)	1619785
253	28.1	3.0	0.0	chr17	44503775	44503838	(38753603)	+	MIR	SINE/MIR	2	67	(195)	1620073
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
2225	13.6	0.0	0.3	chr17	47064525	47064834	(36192607)	+	AluSc	SINE/Alu	1	309	(0)	1625272
3459	16.4	2.1	3.3	chr17	47064835	47065403	(36192038)	C	LTR10E	LTR/ERV1	(63)	570	1	1625271
16	16.0	3.7	5.4	chr17	47530987	47531040	(35726401)	+	(CGCCCT)n	Simple_repeat	1	56	(0)	1626213
12	28.6	4.2	2.7	chr17	47531097	47531167	(35726274)	+	(CCT)n	Simple_repeat	1	74	(0)	1626214
27	0.0	0.0	0.0	chr17	48636528	48636553	(34620888)	+	(T)n	Simple_repeat	1	26	(0)	1628167
379	30.2	9.3	0.2	chr17	49191589	49191799	(34065642)	C	L1ME4b	LINE/L1	(2222)	555	316	1629399
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
34	0.0	0.0	0.0	chr17	51166116	51166144	(32091297)	+	(TG)n	Simple_repeat	1	29	(0)	1633281
12	21.0	5.9	1.9	chr17	51166774	51166824	(32090617)	+	(CGCGCC)n	Simple_repeat	1	54	(0)	1633282
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
1433	20.4	4.6	7.2	chr17	58911862	58912331	(24345110)	C	LTR10B1	LTR/ERV1	(0)	547	1	1646017
4368	7.0	1.2	1.0	chr17	62976580	62977193	(20280248)	+	LTR10C	LTR/ERV1	1	584	(7)	1654061
255	23.6	6.4	4.2	chr17	62977203	62977370	(20280071)	C	MER113B	DNA/hAT-Charlie	(5)	297	126	1654062
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
16	21.6	4.1	0.0	chr17	67378916	67378966	(15878475)	+	G-rich	Low_complexity	1	53	(0)	1661914
1287	14.5	7.4	3.1	chr17	68019554	68019772	(15237669)	C	L1MA4	LINE/L1	(41)	6259	6029	1663340
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
443	28.6	5.2	1.2	chr17	68020281	68020446	(15236995)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1663343
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
28080	2.6	0.3	0.0	chr17	68408124	68414142	(14843299)	C	L1PA3	LINE/L1	(0)	6155	124	1664163
13603	13.2	4.5	1.9	chr17	68414143	68417108	(14840333)	C	L1PB1	LINE/L1	(2119)	4743	1647	1664162
15	14.8	2.4	4.8	chr17	68512499	68512539	(14744902)	+	(CGC)n	Simple_repeat	1	42	(0)	1664337
18	14.9	0.0	7.7	chr17	74203455	74203506	(9053935)	+	GA-rich	Low_complexity	1	52	(0)	1673684
642	0.0	0.0	0.0	chr17	75033906	75033978	(8223463)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1675212
16	8.3	0.0	0.0	chr17	75182636	75182661	(8074780)	+	(GGGA)n	Simple_repeat	1	26	(0)	1675545
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
2013	6.7	1.5	2.2	chr17	75905304	75905571	(7351870)	+	AluSc8	SINE/Alu	1	266	(45)	1676998
12	23.2	0.0	4.5	chr17	77140636	77140679	(6116762)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1679537
10317	23.9	4.5	3.5	chr17	77174219	77174737	(6082704)	C	HERVIP10B3-int	LTR/ERV1	(7081)	522	1	1679599
1609	17.9	20.3	7.8	chr17	77174738	77175209	(6082232)	C	LTR10B1	LTR/ERV1	(0)	547	2	1679599
346	29.4	7.7	8.6	chr17	77736121	77736317	(5521124)	+	MIR3	SINE/MIR	8	202	(6)	1680553
20	12.7	0.0	6.1	chr17	79074731	79074784	(4182657)	+	(CGCCC)n	Simple_repeat	1	50	(0)	1682967
32	30.3	1.9	3.7	chr17	79074947	79075105	(4182336)	+	(GGC)n	Simple_repeat	1	162	(0)	1682968
121	22.7	0.4	8.2	chr17	80929972	80930312	(2327129)	+	(CTCAG)n	Simple_repeat	1	313	(0)	1685673
32	10.5	0.0	6.5	chr17	80930313	80930405	(2327036)	+	(CAGCT)n	Simple_repeat	1	93	(0)	1685674
121	22.7	0.4	8.2	chr17	80930406	80930537	(2326904)	+	(CTCAG)n	Simple_repeat	4	127	(0)	1685675
764	21.5	4.3	0.6	chr17	82288265	82288442	(968999)	+	MLT1B	LTR/ERVL-MaLR	197	381	(9)	1687428
2483	23.8	10.4	0.5	chr17	82288471	82289223	(968218)	+	L1MC3	LINE/L1	6948	7783	(2)	1687424
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
714	29.3	11.7	1.7	chr17	82733417	82733763	(523678)	+	HAL1	LINE/L1	1328	1713	(794)	1688162
2128	7.5	2.9	0.0	chr17	82733893	82734157	(523284)	+	AluSx	SINE/Alu	24	296	(16)	1688163
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
12	22.1	0.0	0.0	chr18	712651	712682	(79660603)	+	GA-rich	Low_complexity	1	32	(0)	1690298
25	22.4	7.0	2.5	chr18	5543320	5543433	(74829852)	+	(GCGCCGC)n	Simple_repeat	1	122	(0)	1697365
209	22.2	12.5	0.0	chr18	9840319	9840381	(70532904)	+	L2a	LINE/L2	3346	3417	(9)	1703734
37	23.7	1.1	8.9	chr18	11981285	11981472	(68391813)	+	G-rich	Low_complexity	1	190	(0)	1706731
15	4.8	0.0	0.0	chr18	12948064	12948085	(67425200)	+	(CGC)n	Simple_repeat	1	22	(0)	1708433
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
13	22.5	3.1	6.1	chr18	21741298	21741361	(58631924)	+	(CCG)n	Simple_repeat	1	66	(0)	1713218
29	5.9	0.0	0.0	chr18	21741528	21741563	(58631722)	+	(CGG)n	Simple_repeat	1	36	(0)	1713219
22	18.8	5.1	3.7	chr18	22169335	22169412	(58203873)	+	(CTCCC)n	Simple_repeat	1	82	(0)	1714086
14	28.1	0.0	0.0	chr18	23689729	23689771	(56683514)	+	(CTG)n	Simple_repeat	1	43	(0)	1716684
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
15	17.5	0.0	0.0	chr18	26863449	26863480	(53509805)	+	(CCCG)n	Simple_repeat	1	32	(0)	1721618
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
1221	14.7	0.0	0.0	chr18	31973884	31974060	(48399225)	+	AluSz	SINE/Alu	1	177	(135)	1728549
1714	19.1	13.1	2.3	chr18	31974061	31974542	(48398743)	C	LTR10B1	LTR/ERV1	(0)	547	6	1728550
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
28	9.8	0.0	0.0	chr18	32772085	32772128	(47601157)	+	(CCCG)n	Simple_repeat	1	44	(0)	1729866
1510	23.9	7.9	5.9	chr18	34504993	34505486	(45867799)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1732043
9851	21.6	6.4	3.6	chr18	34505487	34506910	(45866375)	C	L1MDa	LINE/L1	(5128)	1505	19	1732037
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
316	23.5	8.6	8.1	chr18	37778928	37779084	(42594201)	C	MIRc	SINE/MIR	(45)	163	9	1736519
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
15	27.2	0.0	6.7	chr18	58671348	58671422	(21701863)	+	(GCCCC)n	Simple_repeat	1	75	(0)	1767638
15	28.2	0.0	7.2	chr18	58671867	58671949	(21701336)	+	(GCGG)n	Simple_repeat	1	83	(0)	1767639
19	23.1	2.9	2.8	chr18	62325203	62325271	(18048014)	+	G-rich	Low_complexity	1	71	(0)	1773278
13	3.3	12.1	2.7	chr18	62325382	62325414	(18047871)	+	(GCT)n	Simple_repeat	1	37	(0)	1773279
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
16	21.7	7.7	2.4	chr18	79393786	79393863	(979422)	+	G-rich	Low_complexity	1	84	(0)	1795467
23	22.1	0.0	0.0	chr18	79394058	79394110	(979175)	+	GA-rich	Low_complexity	1	53	(0)	1795468
239	27.7	1.1	5.0	chr19	1401853	1401924	(57215692)	C	MIR	SINE/MIR	(31)	231	163	1798727
1021	9.2	0.0	0.0	chr19	1401925	1402054	(57215562)	C	FLAM_C	SINE/Alu	(10)	133	4	1798728
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
307	25.0	19.4	0.0	chr19	1445568	1445671	(57171945)	+	L2c	LINE/L2	3288	3423	(3)	1798791
938	28.7	6.1	1.9	chr19	4811709	4812265	(53805351)	+	L2a	LINE/L2	2644	3214	(212)	1806537
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
14	14.7	0.0	7.0	chr19	7294289	7294331	(51323285)	+	(GGCGGCG)n	Simple_repeat	1	43	(0)	1812538
22	30.0	2.2	1.1	chr19	7294332	7294350	(51323266)	+	G-rich	Low_complexity	55	93	(0)	1812537
14	15.8	2.7	2.6	chr19	7294486	7294522	(51323094)	+	(CCGC)n	Simple_repeat	1	38	(0)	1812539
2191	9.4	0.0	3.0	chr19	9574157	9574453	(49043163)	C	AluSc8	SINE/Alu	(23)	288	1	1817678
4330	7.1	1.7	5.5	chr19	9574454	9574974	(49042642)	C	LTR10C	LTR/ERV1	(65)	526	1	1817677
1655	11.7	0.8	3.2	chr19	9620761	9621007	(48996609)	+	AluSx	SINE/Alu	1	241	(71)	1817788
1197	7.5	0.0	0.7	chr19	9673774	9673921	(48943695)	+	AluSx	SINE/Alu	51	197	(115)	1817895
3136	11.5	3.2	2.6	chr19	9673926	9674425	(48943191)	C	LTR10F	LTR/ERV1	(7)	504	2	1817896
14	15.9	0.0	0.0	chr19	10568987	10569014	(48048602)	+	(CGC)n	Simple_repeat	1	28	(0)	1820117
1004	26.2	9.9	4.2	chr19	11738025	11738525	(46879091)	+	LTR26C	LTR/ERV1	7	539	(0)	1823045
1097	22.2	11.8	1.8	chr19	11767468	11767924	(46849692)	C	LTR26E	LTR/ERV1	(0)	622	48	1823096
27	0.0	0.0	0.0	chr19	12401542	12401567	(46216049)	+	(T)n	Simple_repeat	1	26	(0)	1824374
36	0.0	0.0	0.0	chr19	12401570	12401600	(46216016)	+	(GA)n	Simple_repeat	1	31	(0)	1824375
2029	8.1	2.5	1.8	chr19	12401601	12401872	(46215744)	C	AluSg	SINE/Alu	(35)	275	2	1824376
877	15.6	0.7	0.7	chr19	13854420	13854560	(44763056)	C	AluSx	SINE/Alu	(171)	141	1	1827967
1678	18.3	0.3	2.7	chr19	13854561	13854721	(44762895)	C	AluJo	SINE/Alu	(18)	294	134	1827968
2041	4.7	8.2	0.0	chr19	13854722	13855007	(44762609)	C	AluY	SINE/Alu	(0)	311	1	1827969
728	13.9	0.0	0.9	chr19	16221115	16221230	(42396386)	C	AluSx	SINE/Alu	(0)	312	198	1833425
3102	12.5	12.9	0.7	chr19	16221231	16221785	(42395831)	C	LTR10E	LTR/ERV1	(0)	633	1	1833426
15	13.2	0.0	5.4	chr19	17303053	17303089	(41314527)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	1835982
21	26.4	2.8	0.0	chr19	19618578	19618649	(38998967)	+	G-rich	Low_complexity	1	74	(0)	1841312
16	17.8	2.1	4.1	chr19	19664081	19664128	(38953488)	+	(GGCGG)n	Simple_repeat	1	49	(0)	1841381
2292	6.9	3.6	0.0	chr19	19664195	19664484	(38953132)	+	AluSx	SINE/Alu	2	302	(10)	1841382
2153	12.2	1.0	0.0	chr19	19686853	19687156	(38930460)	+	AluSz6	SINE/Alu	1	307	(5)	1841442
12	27.7	0.0	2.2	chr19	19687319	19687363	(38930253)	+	(CTCC)n	Simple_repeat	1	45	(0)	1841443
2500	6.1	0.0	0.7	chr19	21329691	21329985	(37287631)	C	AluSp	SINE/Alu	(20)	293	1	1843855
6782	18.3	3.4	6.5	chr19	21335515	21335806	(37281810)	C	MER57A-int	LTR/ERV1	(659)	5528	5238	1843866
4312	7.7	5.2	1.1	chr19	21335807	21336413	(37281203)	C	LTR10E	LTR/ERV1	(0)	633	1	1843872
29	18.4	5.3	7.6	chr19	34254583	34254771	(24362845)	+	G-rich	Low_complexity	1	184	(0)	1858260
12	23.8	3.9	1.9	chr19	34255204	34255254	(24362362)	+	(GAGCGCC)n	Simple_repeat	1	53	(0)	1858261
560	10.3	2.5	0.0	chr19	34678152	34678229	(23939387)	C	AluSz	SINE/Alu	(224)	88	9	1858989
1618	10.4	0.5	1.4	chr19	34678230	34678450	(23939166)	+	AluSx3	SINE/Alu	82	300	(11)	1858990
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
565	28.5	22.1	1.4	chr19	35066708	35067121	(23550495)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	14	1859641
14	22.7	5.8	5.4	chr19	35140881	35140967	(23476649)	+	(CCTCTC)n	Simple_repeat	1	92	(0)	1859804
338	31.5	4.0	5.8	chr19	35141669	35141878	(23475738)	C	L2b	LINE/L2	(10)	3377	3192	1859805
1952	12.8	0.7	1.7	chr19	35322308	35322451	(23295165)	C	AluSq2	SINE/Alu	(4)	309	170	1860183
4361	9.2	0.7	0.3	chr19	35322452	35323040	(23294576)	C	LTR10C	LTR/ERV1	(0)	591	1	1860184
15	14.3	2.4	4.7	chr19	35987017	35987058	(22630558)	+	(CCTTCC)n	Simple_repeat	1	43	(0)	1861619
11	24.8	0.0	2.5	chr19	35987143	35987182	(22630434)	+	(CTGTCT)n	Simple_repeat	1	40	(0)	1861620
1083	15.2	0.5	5.1	chr19	35987472	35987668	(22629948)	+	AluJb	SINE/Alu	120	307	(5)	1861621
838	26.6	12.5	0.7	chr19	36128478	36128765	(22488851)	+	LTR10B	LTR/ERV1	179	505	(0)	1861928
341	13.6	5.7	0.0	chr19	36128766	36128831	(22488785)	C	MER84	LTR/ERV1	(54)	453	384	1861929
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
2031	14.6	0.0	0.0	chr19	36379389	36379690	(22237926)	C	AluJo	SINE/Alu	(10)	302	1	1862427
192	25.7	10.7	0.0	chr19	36687879	36687972	(21929644)	+	L2a	LINE/L2	3260	3400	(26)	1863053
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
492	25.5	20.9	0.5	chr19	40433498	40433706	(18183910)	C	L2a	LINE/L2	(338)	3081	2819	1871042
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
376	16.3	15.8	9.6	chr19	41127634	41127761	(17489855)	C	MIR	SINE/MIR	(116)	152	20	1872647
382	28.9	9.6	6.6	chr19	41706945	41707365	(16910251)	+	L2a	LINE/L2	2940	3419	(7)	1873776
12	13.9	6.2	0.0	chr19	42176848	42176879	(16440737)	+	(CGCC)n	Simple_repeat	1	34	(0)	1874737
30	22.1	0.0	3.6	chr19	42177009	42177092	(16440524)	+	(GCGG)n	Simple_repeat	1	84	(0)	1874738
17	6.5	2.8	5.4	chr19	42177108	42177143	(16440473)	+	(GCCC)n	Simple_repeat	1	37	(0)	1874739
28	3.3	0.0	0.0	chr19	42177252	42177282	(16440334)	+	(CCCGCT)n	Simple_repeat	1	31	(0)	1874740
3260	14.2	3.2	0.9	chr19	43308380	43308933	(15308683)	C	LTR10C	LTR/ERV1	(18)	573	7	1876499
22291	28.8	3.9	4.0	chr19	43314474	43317093	(15300523)	C	HERVIP10F-int	LTR/ERV1	(5185)	2552	24	1876499
1122	17.2	4.6	1.4	chr19	43317133	43317344	(15300272)	C	LTR10C	LTR/ERV1	(18)	573	355	1876499
1415	22.7	2.7	3.0	chr19	43317345	43317712	(15299904)	+	L1M3	LINE/L1	5277	5643	(540)	1876502
191	32.2	9.4	0.0	chr19	44500820	44500934	(14116682)	C	MIRb	SINE/MIR	(12)	256	130	1878829
19	29.8	1.5	0.0	chr19	44846535	44846601	(13771015)	+	(GCCGCT)n	Simple_repeat	1	68	(0)	1879788
20	15.0	0.0	0.0	chr19	44846570	44846606	(13771010)	+	(GCT)n	Simple_repeat	1	37	(0)	1879789
2764	17.1	1.7	1.3	chr19	46077920	46078519	(12539097)	+	L1M4	LINE/L1	5196	5797	(383)	1882932
1939	24.9	11.6	9.5	chr19	46132077	46133206	(12484410)	C	HERV35I-int	LTR/ERV1	(5736)	1182	26	1882995
3708	12.6	2.2	1.5	chr19	46133207	46133793	(12483823)	C	LTR10C	LTR/ERV1	(0)	591	1	1882995
243	27.5	0.0	4.2	chr19	46600396	46600467	(12017149)	+	L2b	LINE/L2	3305	3373	(2)	1884095
13	3.8	6.9	3.2	chr19	46639025	46639053	(11978563)	+	(GGACA)n	Simple_repeat	1	31	(0)	1884164
207	26.3	5.0	0.0	chr19	48637311	48637367	(9980249)	+	X9_LINE	LINE/L1	584	643	(293)	1889253
14	10.7	3.1	3.0	chr19	48637382	48637413	(9980203)	+	GA-rich	Low_complexity	1	33	(0)	1889254
14	16.9	2.3	4.4	chr19	48714440	48714483	(9903133)	+	(CGCGG)n	Simple_repeat	1	45	(0)	1889450
2419	7.6	0.0	0.7	chr19	48811212	48811514	(9806102)	+	AluSx1	SINE/Alu	2	302	(10)	1889666
819	11.0	0.0	0.0	chr19	48882278	48882395	(9735221)	+	MER41B	LTR/ERV1	13	130	(504)	1889855
4069	6.2	0.0	0.0	chr19	48882411	48882938	(9734678)	C	LTR10C	LTR/ERV1	(0)	591	64	1889856
13	12.5	0.0	9.5	chr19	52140251	52140292	(6477324)	+	A-rich	Low_complexity	1	42	(0)	1896851
3658	6.7	3.5	0.0	chr19	52735281	52735746	(5881870)	+	LTR2B	LTR/ERV1	1	483	(0)	1898076
747	12.6	0.0	0.0	chr19	52821821	52821931	(5795685)	+	AluYc	SINE/Alu	188	298	(1)	1898248
375	18.0	1.1	6.3	chr19	52821950	52822044	(5795572)	C	L1M4	LINE/L1	(1174)	4972	4883	1898249
6274	12.6	2.8	5.4	chr19	53745804	53746838	(4870778)	C	LTR13	LTR/ERVK	(0)	1007	1	1900118
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
545	30.5	9.7	1.9	chr19	57190619	57190939	(1426677)	+	L2	LINE/L2	2207	2555	(864)	1907414
2060	6.1	3.6	3.2	chr19	57819208	57819513	(798103)	C	AluY	SINE/Alu	(0)	311	1	1908382
13	9.3	0.0	0.0	chr2	288132	288154	(241905375)	+	(CCCG)n	Simple_repeat	1	23	(0)	1911121
74	13.2	0.0	3.0	chr2	4410126	4410260	(237783269)	+	(CCTC)n	Simple_repeat	1	135	(0)	1915708
13	25.5	6.0	1.4	chr2	6865382	6865448	(235328081)	+	(GCCGCA)n	Simple_repeat	1	71	(0)	1919130
14	11.1	0.0	6.1	chr2	9003628	9003660	(233189869)	+	(CGCC)n	Simple_repeat	1	33	(0)	1922157
12	14.9	3.3	0.0	chr2	9003744	9003773	(233189756)	+	(GGCCGG)n	Simple_repeat	1	31	(0)	1922158
29	25.3	0.0	8.1	chr2	9003769	9003904	(233189625)	+	(CCCCGC)n	Simple_repeat	1	136	(0)	1922159
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
13	16.5	8.2	1.9	chr2	17753811	17753859	(224439670)	+	(GCGCCT)n	Simple_repeat	1	53	(0)	1936458
25	20.3	1.5	2.9	chr2	20350704	20350770	(221842759)	+	(TCC)n	Simple_repeat	1	68	(0)	1940192
19	24.8	5.6	2.1	chr2	23940376	23940464	(218253065)	+	(GCGCCC)n	Simple_repeat	1	94	(0)	1945145
15	21.9	0.0	2.3	chr2	23940659	23940702	(218252827)	+	G-rich	Low_complexity	1	44	(0)	1945146
14	10.0	6.2	0.0	chr2	25041967	25041998	(217151531)	+	G-rich	Low_complexity	1	34	(0)	1947188
13	21.2	2.6	0.0	chr2	26244721	26244758	(215948771)	+	(TGGCCCC)n	Simple_repeat	1	39	(0)	1949598
33	0.0	0.0	0.0	chr2	27086722	27086752	(215106777)	+	(CGGGG)n	Simple_repeat	1	31	(0)	1951151
14	22.7	0.0	2.3	chr2	28392229	28392271	(213801258)	+	(CTCCCGG)n	Simple_repeat	1	43	(0)	1953483
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
2363	4.9	0.4	2.1	chr2	28893963	28894280	(213299249)	C	AluSg7	SINE/Alu	(0)	309	1	1954453
2265	6.5	2.3	3.6	chr2	28894281	28894422	(213299107)	C	AluSp	SINE/Alu	(173)	140	1	1954452
16	18.8	2.3	2.2	chr2	30707222	30707265	(211486264)	+	(ATG)n	Simple_repeat	1	45	(0)	1957441
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
13	18.2	0.0	0.0	chr2	36598022	36598052	(205595477)	+	(CCGCCT)n	Simple_repeat	1	31	(0)	1966234
17	6.8	6.5	0.0	chr2	38602153	38602183	(203591346)	+	(CGC)n	Simple_repeat	1	33	(0)	1969542
16	10.8	3.3	0.0	chr2	38602456	38602485	(203591044)	+	(GCC)n	Simple_repeat	1	31	(0)	1969543
28	0.0	3.3	0.0	chr2	42810107	42810136	(199383393)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1976361
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
22	16.0	8.8	2.3	chr2	45651173	45651252	(196542277)	+	(GGCGAGC)n	Simple_repeat	1	87	(0)	1981030
1712	15.1	1.8	4.1	chr2	53961388	53961679	(188231850)	+	AluJb	SINE/Alu	2	286	(26)	1993453
4932	4.0	0.5	0.0	chr2	53961698	53962275	(188231254)	C	LTR10C	LTR/ERV1	(0)	591	11	1993454
999	19.2	7.5	6.3	chr2	54116227	54116620	(188076909)	C	Charlie2b	DNA/hAT-Charlie	(77)	2705	2307	1993802
2729	14.1	6.6	1.4	chr2	54116642	54117158	(188076371)	C	LTR10A	LTR/ERV1	(63)	546	1	1993803
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
12	26.8	0.0	8.9	chr2	61065894	61065972	(181127557)	+	G-rich	Low_complexity	1	79	(0)	2003591
1196	24.1	5.3	0.5	chr2	61959704	61960096	(180233433)	C	LTR10C	LTR/ERV1	(43)	590	96	2005563
1346	22.4	8.3	1.4	chr2	62324796	62325144	(179868385)	C	LTR51	LTR/ERV1	(75)	596	222	2006281
347	25.7	10.9	1.1	chr2	62325270	62325427	(179868102)	C	MER101B	LTR/ERV1	(406)	191	1	2006282
3145	11.3	11.8	2.9	chr2	62325463	62326018	(179867511)	C	LTR10E	LTR/ERV1	(21)	612	1	2006283
1121	26.3	10.0	0.8	chr2	62371915	62372768	(179820761)	C	L1ME3E	LINE/L1	(118)	6124	5166	2006403
3999	9.9	1.6	0.7	chr2	62372967	62373534	(179819995)	C	LTR10C	LTR/ERV1	(18)	573	1	2006404
272	21.1	4.7	0.0	chr2	62506436	62506506	(179687023)	+	L1ME4a	LINE/L1	5517	5579	(545)	2006624
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
26	16.8	0.0	0.0	chr2	64768704	64768752	(177424777)	+	(TCCC)n	Simple_repeat	1	49	(0)	2009903
26	9.8	2.2	0.0	chr2	64988911	64988955	(177204574)	+	(CCTCC)n	Simple_repeat	1	46	(0)	2010348
18	6.8	3.2	0.0	chr2	66434175	66434205	(175759324)	+	(CCGCG)n	Simple_repeat	1	32	(0)	2012777
321	29.2	17.4	3.2	chr2	68052912	68053126	(174140403)	C	MIR	SINE/MIR	(21)	241	2	2014960
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
12	26.2	0.0	2.3	chr2	69387605	69387647	(172805882)	+	(GCAGGAA)n	Simple_repeat	1	43	(0)	2016985
13	17.7	4.2	4.0	chr2	70554078	70554125	(171639404)	+	G-rich	Low_complexity	1	50	(0)	2019278
24	17.1	4.3	2.8	chr2	70994826	70994894	(171198635)	+	(GCC)n	Simple_repeat	1	72	(0)	2019949
218	25.7	4.2	8.9	chr2	71276168	71276291	(170917238)	+	L2c	LINE/L2	3250	3367	(20)	2020406
332	30.1	18.8	1.6	chr2	73385178	73385366	(168808163)	C	MIRb	SINE/MIR	(14)	254	26	2023642
18	9.1	5.3	2.5	chr2	73385805	73385842	(168807687)	+	(CTC)n	Simple_repeat	1	40	(0)	2023643
19	20.3	0.0	2.1	chr2	73385843	73385850	(168807679)	+	(CTCCCC)n	Simple_repeat	3	48	(0)	2023644
51	2.0	0.0	0.0	chr2	73385904	73385953	(168807576)	+	(GGA)n	Simple_repeat	1	50	(0)	2023645
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
2497	24.6	8.4	5.1	chr2	74119371	74120003	(168073526)	C	L1MC4	LINE/L1	(472)	7570	6889	2024825
14	16.8	3.9	5.6	chr2	84970686	84970737	(157222792)	+	(GGCCCA)n	Simple_repeat	1	54	(0)	2039809
13	25.9	3.2	3.1	chr2	84970747	84970809	(157222720)	+	G-rich	Low_complexity	1	65	(0)	2039810
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2389	6.0	3.5	0.0	chr2	95076407	95076705	(147116824)	+	AluSq2	SINE/Alu	1	310	(3)	2050153
2212	20.0	3.7	8.1	chr2	95206313	95206957	(146986572)	C	LTR6A	LTR/ERV1	(0)	564	1	2050361
12	16.0	2.0	8.0	chr2	96116834	96116882	(146076647)	+	G-rich	Low_complexity	1	50	(0)	2051590
11	13.5	14.3	0.0	chr2	96117192	96117240	(146076289)	+	(CAGCCCGG)n	Simple_repeat	1	56	(0)	2051591
18	23.3	1.8	1.7	chr2	98936205	98936261	(143257268)	+	(CGGCT)n	Simple_repeat	1	58	(0)	2055690
12	11.9	0.0	6.5	chr2	99489774	99489804	(142703725)	+	(CCCGC)n	Simple_repeat	1	31	(0)	2056542
14	28.6	2.6	3.8	chr2	100417614	100417690	(141775839)	+	(CGCC)n	Simple_repeat	1	79	(0)	2057844
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
635	25.3	11.8	9.1	chr2	109031129	109031480	(133162049)	C	MLT1A1	LTR/ERVL-MaLR	(3)	405	43	2070165
1622	13.2	0.0	3.6	chr2	109611507	109611757	(132581772)	+	AluJb	SINE/Alu	32	273	(39)	2070954
3922	16.3	6.2	2.5	chr2	109611758	109612551	(132580978)	+	L1MD1	LINE/L1	5418	6242	(0)	2070953
379	23.4	16.3	2.5	chr2	112099913	112100203	(130093326)	C	L1ME3G	LINE/L1	(2159)	618	279	2074547
304	27.6	0.3	0.0	chr2	112100359	112100447	(130093082)	C	L1M5	LINE/L1	(522)	5601	5513	2074549
616	31.3	7.0	4.0	chr2	112480821	112481196	(129712333)	C	LTR16C	LTR/ERVL	(1)	488	101	2075171
1348	19.6	2.7	2.0	chr2	113583264	113583560	(128609969)	C	L1MB3	LINE/L1	(2)	6181	5883	2077015
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
376	26.8	8.5	10.1	chr2	119702437	119702664	(122490865)	+	MamGypLTR1c	LTR/Gypsy	552	775	(28)	2085791
2744	22.5	6.0	7.7	chr2	121682072	121682907	(120510622)	C	HERVIP10FH-int	LTR/ERV1	(4462)	640	1	2089106
2840	15.9	5.9	1.9	chr2	121682921	121683452	(120510077)	C	LTR10A	LTR/ERV1	(54)	555	1	2089108
19	17.5	3.6	3.5	chr2	127858082	127858137	(114335392)	+	(CGC)n	Simple_repeat	1	58	(0)	2098144
12	17.0	6.9	4.8	chr2	149330474	149330531	(92862998)	+	(CCGCGG)n	Simple_repeat	1	62	(0)	2127920
13	14.7	3.3	0.0	chr2	157628876	157628905	(84564624)	+	G-rich	Low_complexity	1	31	(0)	2138967
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
21	4.2	0.0	0.0	chr2	159712088	159712112	(82481417)	+	(A)n	Simple_repeat	1	25	(0)	2142018
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
19	24.4	3.4	4.3	chr2	161160246	161160334	(81033195)	+	(GGCAG)n	Simple_repeat	1	92	(0)	2144048
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
16	22.6	1.8	3.6	chr2	171160827	171160881	(71032648)	+	(CGG)n	Simple_repeat	1	56	(0)	2157912
30	5.6	0.0	0.0	chr2	171160967	171161003	(71032526)	+	(GCG)n	Simple_repeat	1	37	(0)	2157913
17	21.4	0.0	2.2	chr2	180873432	180873476	(61320053)	+	(GGC)n	Simple_repeat	1	45	(0)	2172010
18337	12.5	3.5	1.6	chr2	180873555	180875820	(61317709)	+	L1MA3	LINE/L1	2339	4611	(2954)	2172009
16	0.0	4.3	0.0	chr2	181891558	181891580	(60301949)	+	(GGA)n	Simple_repeat	1	24	(0)	2173260
17	18.6	3.3	4.8	chr2	181891634	181891693	(60301836)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2173261
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
827	16.5	0.0	0.0	chr2	187010729	187010855	(55182674)	+	AluJo	SINE/Alu	167	293	(19)	2179855
498	28.7	8.4	0.0	chr2	190534179	190534342	(51659187)	+	MIR3	SINE/MIR	13	191	(17)	2184501
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
339	27.0	13.9	10.2	chr2	191245109	191245343	(50948186)	+	L1M4b	LINE/L1	411	655	(6212)	2185587
29	3.2	0.0	0.0	chr2	191678404	191678435	(50515094)	+	(T)n	Simple_repeat	1	32	(0)	2186263
11	11.1	6.9	0.0	chr2	196171041	196171069	(46022460)	+	(CACACG)n	Simple_repeat	1	31	(0)	2192006
44	26.5	1.6	5.2	chr2	196171682	196171870	(46021659)	+	G-rich	Low_complexity	1	192	(0)	2192007
13	13.2	6.7	4.2	chr2	196593438	196593482	(45600047)	+	(CCGCGGTG)n	Simple_repeat	1	48	(0)	2192634
4639	6.3	0.5	1.4	chr2	197483235	197483826	(44709703)	+	LTR10C	LTR/ERV1	5	591	(0)	2194131
482	10.0	0.0	0.0	chr2	197483827	197483886	(44709643)	C	AluYk11	SINE/Alu	(251)	60	1	2194132
343	30.6	7.9	2.6	chr2	197483889	197483917	(44709612)	C	L1MC5a	LINE/L1	(881)	6904	6872	2194133
2176	12.9	0.6	1.3	chr2	197483918	197484228	(44709301)	+	AluSz6	SINE/Alu	1	309	(3)	2194134
394	27.2	8.7	2.7	chr2	197484229	197484389	(44709140)	C	L1MC5a	LINE/L1	(1227)	1550	1392	2194133
2197	12.3	0.0	0.3	chr2	197599851	197600158	(44593371)	C	AluSx	SINE/Alu	(5)	307	1	2194346
14	19.9	2.4	2.3	chr2	200306622	200306663	(41886866)	+	(GGCG)n	Simple_repeat	1	43	(0)	2198136
22	24.2	2.6	6.7	chr2	200306780	200306895	(41886634)	+	(CGGCCC)n	Simple_repeat	1	119	(0)	2198137
11	24.9	2.0	3.9	chr2	200307261	200307311	(41886218)	+	(CGCCCG)n	Simple_repeat	1	52	(0)	2198138
13	20.5	0.0	4.7	chr2	201451406	201451448	(40742081)	+	(GCAGCC)n	Simple_repeat	1	43	(0)	2200073
11	19.5	2.1	6.2	chr2	201451779	201451825	(40741704)	+	(GCCCCGC)n	Simple_repeat	1	48	(0)	2200074
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
29	7.2	2.3	0.0	chr2	204545612	204545655	(37647874)	+	(GCCAGG)n	Simple_repeat	1	45	(0)	2205786
326	23.5	13.1	4.0	chr2	204545685	204545808	(37647721)	C	L1MDb	LINE/L1	(5718)	691	555	2205787
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
21	19.8	0.0	0.0	chr2	205682634	205682679	(36510850)	+	(CAG)n	Simple_repeat	1	46	(0)	2207283
16	8.7	0.0	0.0	chr2	205682922	205682946	(36510583)	+	(ATT)n	Simple_repeat	1	25	(0)	2207284
2164	9.3	2.0	0.3	chr2	207626911	207627211	(34566318)	C	AluSq2	SINE/Alu	(6)	307	2	2210340
13	30.1	1.7	1.7	chr2	207627430	207627488	(34566041)	+	(CTTTTT)n	Simple_repeat	1	60	(0)	2210341
19	0.0	0.0	0.0	chr2	209424083	209424106	(32769423)	+	(GCA)n	Simple_repeat	1	24	(0)	2213017
18	13.4	5.7	3.6	chr2	209424107	209424179	(32769350)	+	(TCTTC)n	Simple_repeat	1	74	(0)	2213018
1283	31.1	12.6	2.8	chr2	212627570	212628439	(29565090)	C	L2a	LINE/L2	(1529)	1890	923	2217196
1191	24.4	6.1	1.7	chr2	212628460	212628817	(29564712)	C	LTR10C	LTR/ERV1	(29)	562	188	2217197
14	7.2	0.0	8.6	chr2	218406515	218406549	(23786980)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2226047
674	22.8	18.9	12.6	chr2	218909457	218909862	(23283667)	+	Arthur1B	DNA/hAT-Tip100	14	451	(774)	2227017
12	20.9	0.0	7.8	chr2	223837325	223837375	(18356154)	+	(GGCCC)n	Simple_repeat	1	51	(0)	2234958
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
13	5.3	0.0	0.0	chr2	224585308	224585327	(17608202)	+	(GGC)n	Simple_repeat	1	20	(0)	2236170
22	9.4	0.0	0.0	chr2	224585356	224585389	(17608140)	+	(TCC)n	Simple_repeat	1	34	(0)	2236171
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
11	6.7	5.4	7.7	chr2	226031344	226031380	(16162149)	+	(CCCCCTT)n	Simple_repeat	1	39	(0)	2238334
14	22.5	7.0	0.0	chr2	226031454	226031510	(16162019)	+	(GGCTGC)n	Simple_repeat	1	61	(0)	2238335
20	3.3	3.0	2.9	chr2	226799648	226799680	(15393849)	+	(CTC)n	Simple_repeat	1	34	(0)	2239468
966	31.5	8.2	3.3	chr2	230783935	230784692	(11408837)	C	L2	LINE/L2	(568)	2851	2054	2245703
1328	19.2	6.9	2.6	chr2	230784698	230785100	(11408429)	C	LTR10C	LTR/ERV1	(76)	557	98	2245704
427	25.9	12.5	0.9	chr2	230848294	230848588	(11344941)	+	L1ME4a	LINE/L1	4371	4711	(1435)	2245788
36	6.8	0.0	0.0	chr2	230864697	230864743	(11328786)	+	(TGAG)n	Simple_repeat	1	47	(0)	2245825
16	20.2	5.3	5.1	chr2	230864784	230864858	(11328671)	+	(GGCGC)n	Simple_repeat	1	79	(0)	2245826
15	16.9	0.0	0.0	chr2	230865085	230865117	(11328412)	+	(GGCGTC)n	Simple_repeat	1	33	(0)	2245827
366	20.9	3.2	0.0	chr2	231841760	231841848	(10351681)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247734
373	21.7	2.1	0.0	chr2	231841849	231841938	(10351591)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247734
341	22.0	3.2	0.0	chr2	231841939	231842027	(10351502)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247734
345	22.0	3.2	0.0	chr2	231842028	231842116	(10351413)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247734
289	29.3	9.7	2.1	chr2	233868462	233868747	(8324782)	C	L1M5	LINE/L1	(2848)	3298	2989	2251040
274	26.8	3.5	0.0	chr2	237962507	237962562	(4230967)	+	MIR	SINE/MIR	15	72	(190)	2257151
1204	22.6	7.0	4.2	chr2	237962564	237962964	(4230565)	C	LTR10C	LTR/ERV1	(43)	590	96	2257152
2037	6.9	6.7	4.9	chr2	241700957	241701262	(492267)	C	AluSz	SINE/Alu	(0)	312	1	2261582
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
472	25.6	11.3	4.2	chr20	309737	309948	(64134219)	C	MIR	SINE/MIR	(1)	261	33	2262617
16	22.3	0.0	4.2	chr20	310124	310171	(64133996)	+	(CCTT)n	Simple_repeat	1	48	(0)	2262618
13	18.4	5.7	3.6	chr20	462515	462567	(63981600)	+	(CCGCGGC)n	Simple_repeat	1	56	(0)	2262991
192	26.9	20.0	6.3	chr20	462725	462835	(63981332)	+	MIR	SINE/MIR	118	247	(15)	2262992
14	35.9	0.0	0.0	chr20	653096	653162	(63791005)	+	(GCCCG)n	Simple_repeat	1	67	(0)	2263435
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
16	14.2	0.0	0.0	chr20	653539	653569	(63790598)	+	(GCGGGG)n	Simple_repeat	1	31	(0)	2263437
4824	3.8	2.4	0.2	chr20	1364396	1364973	(63079194)	+	LTR10C	LTR/ERV1	1	591	(0)	2264879
15	7.5	3.3	3.2	chr20	1364982	1365011	(63079156)	+	(GGT)n	Simple_repeat	1	31	(0)	2264880
22	15.4	0.0	0.0	chr20	2651988	2652023	(61792144)	+	A-rich	Low_complexity	1	36	(0)	2267365
14	24.4	0.0	2.2	chr20	2652173	2652218	(61791949)	+	G-rich	Low_complexity	1	46	(0)	2267366
32	7.4	0.0	0.0	chr20	2652733	2652775	(61791392)	+	(GGGCCT)n	Simple_repeat	1	43	(0)	2267367
83	2.5	0.0	0.0	chr20	10034876	10034957	(54409210)	+	(GGCGGA)n	Simple_repeat	1	82	(0)	2279873
13	23.0	5.6	4.0	chr20	25390236	25390306	(39053861)	+	(GCAGG)n	Simple_repeat	1	75	(0)	2302096
18	25.3	1.3	5.1	chr20	25390705	25390781	(39053386)	+	(CCG)n	Simple_repeat	1	78	(0)	2302097
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
16	22.7	4.2	4.0	chr20	25585610	25585681	(38858486)	+	G-rich	Low_complexity	1	75	(0)	2302423
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
17	17.3	0.0	5.9	chr20	36573656	36573706	(27870461)	+	(CGCGCCC)n	Simple_repeat	1	51	(0)	2317921
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
2195	11.9	11.5	1.8	chr20	41553244	41553781	(22890386)	+	LTR10E	LTR/ERV1	1	590	(43)	2327703
1967	16.4	1.7	0.0	chr20	41553868	41554159	(22890008)	+	AluJb	SINE/Alu	1	297	(15)	2327704
1644	18.6	22.1	1.4	chr20	41599676	41600107	(22844060)	+	LTR10B1	LTR/ERV1	1	547	(0)	2327764
376	23.7	10.9	0.9	chr20	41600108	41600222	(22843945)	+	L2c	LINE/L2	3260	3387	(0)	2327763
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
318	27.0	5.0	5.8	chr20	44532284	44532460	(19911707)	+	MIR	SINE/MIR	72	268	(0)	2333727
1002	17.4	0.0	0.0	chr20	44884925	44885079	(19559088)	C	FRAM	SINE/Alu	(21)	155	1	2334593
14	13.9	2.2	6.5	chr20	44885524	44885568	(19558599)	+	(CCCTGC)n	Simple_repeat	1	46	(0)	2334594
33	26.3	0.0	0.0	chr20	44885718	44885803	(19558364)	+	(CCG)n	Simple_repeat	1	86	(0)	2334595
17	25.9	6.0	1.1	chr20	49277930	49278013	(15166154)	+	G-rich	Low_complexity	1	89	(0)	2344005
11	26.9	4.1	0.0	chr20	49278136	49278158	(15166009)	+	(GGCGGA)n	Simple_repeat	1	50	(0)	2344006
13	13.2	0.0	0.0	chr20	49278159	49278183	(15165984)	+	(GAG)n	Simple_repeat	1	25	(0)	2344007
22	12.6	4.4	0.0	chr20	50166362	50166406	(14277761)	+	(CTTCT)n	Simple_repeat	1	47	(0)	2346248
1578	15.4	5.4	10.2	chr20	50166407	50166714	(14277453)	C	L1MB3	LINE/L1	(328)	5855	5547	2346249
335	29.8	11.2	7.1	chr20	50794681	50794850	(13649317)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	2347757
27	7.9	2.5	0.0	chr20	50818433	50818472	(13625695)	+	(CT)n	Simple_repeat	1	41	(0)	2347820
13	17.2	4.9	2.3	chr20	56219689	56219729	(8224438)	+	(TTCA)n	Simple_repeat	1	43	(0)	2358614
2111	19.6	10.1	4.8	chr20	56219756	56220232	(8223935)	C	LTR10B	LTR/ERV1	(0)	505	1	2358615
2229	10.4	0.0	1.3	chr20	62301637	62301943	(2142224)	C	AluSz	SINE/Alu	(6)	306	4	2368406
2096	10.1	0.7	0.7	chr20	62920897	62921194	(1522973)	C	AluSx	SINE/Alu	(13)	299	2	2369092
679	25.7	16.5	2.9	chr20	62921195	62921356	(1522811)	+	Charlie1b	DNA/hAT-Charlie	356	523	(0)	2369091
2113	8.1	2.7	3.0	chr20	63954969	63955266	(488901)	+	AluSx	SINE/Alu	1	297	(15)	2370298
3208	10.1	3.2	0.2	chr20	64254837	64255294	(188873)	C	MER4A1	LTR/ERV1	(0)	472	1	2370629
28	0.0	0.0	0.0	chr20	64255724	64255749	(188418)	+	(GGC)n	Simple_repeat	1	26	(0)	2370630
17	0.0	0.0	0.0	chr20	64255876	64255896	(188271)	+	(GCC)n	Simple_repeat	1	21	(0)	2370631
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
1011	24.6	11.0	0.6	chr21	6360965	6361291	(40348692)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2371783
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
2761	17.5	4.4	0.8	chr21	9317965	9318489	(37391494)	+	MER52A	LTR/ERV1	1211	1755	(0)	2374416
8987	11.4	0.1	1.4	chr21	9318490	9319139	(37390844)	C	L1MA3	LINE/L1	(297)	6008	5360	2374417
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
471	27.5	6.0	1.2	chr21	10330456	10330628	(36379355)	C	ERVL-E-int	LTR/ERVL	(648)	5019	4838	2375365
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
27	3.5	0.0	0.0	chr21	15730357	15730386	(30979597)	+	(CGC)n	Simple_repeat	1	30	(0)	2379541
15	29.9	2.8	1.4	chr21	15730497	15730573	(30979410)	+	(CGGCCC)n	Simple_repeat	1	78	(0)	2379542
2477	9.7	0.0	0.0	chr21	31574602	31574910	(15135073)	C	AluSg	SINE/Alu	(1)	309	1	2401629
412	8.2	4.7	0.0	chr21	31575068	31575128	(15134855)	C	Alu	SINE/Alu	(15)	296	233	2401630
4031	11.7	0.8	7.1	chr21	31575170	31575730	(15134253)	C	LTR9	LTR/ERV1	(1)	611	63	2401631
33	17.4	1.4	1.4	chr21	31732160	31732232	(14977751)	+	(CGCCC)n	Simple_repeat	1	74	(0)	2401953
12	15.7	2.6	5.0	chr21	31732235	31732273	(14977710)	+	G-rich	Low_complexity	1	40	(0)	2401954
19	15.1	4.5	0.0	chr21	31732278	31732321	(14977662)	+	(CGG)n	Simple_repeat	1	46	(0)	2401955
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
13	27.3	0.0	3.6	chr21	33642812	33642867	(13067116)	+	(CGCCCCG)n	Simple_repeat	1	56	(0)	2405361
185	24.0	0.0	2.0	chr21	33643407	33643457	(13066526)	+	OldhAT1	DNA/hAT-Ac	1653	1702	(1146)	2405362
14	21.0	3.3	4.8	chr21	34888319	34888378	(11821605)	+	(CACGC)n	Simple_repeat	1	62	(0)	2407307
17	12.7	0.0	0.0	chr21	34888500	34888525	(11821458)	+	(A)n	Simple_repeat	1	26	(0)	2407308
15	24.4	2.1	0.0	chr21	36989779	36989826	(9720157)	+	G-rich	Low_complexity	1	49	(0)	2410805
1478	22.3	12.1	8.2	chr21	36990585	36991247	(9718736)	C	MER21C	LTR/ERVL	(130)	808	18	2410806
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
16	11.7	3.6	0.0	chr21	37073463	37073490	(9636493)	+	(GT)n	Simple_repeat	1	29	(0)	2410978
2518	7.3	0.0	0.0	chr21	42604929	42605231	(4104752)	+	AluY	SINE/Alu	1	303	(8)	2419078
3091	8.8	11.2	4.8	chr21	42605232	42605751	(4104232)	C	LTR10E	LTR/ERV1	(66)	567	1	2419077
2152	29.2	7.9	3.2	chr21	44428964	44429264	(2280719)	C	L1M5	LINE/L1	(1450)	4696	4385	2421734
3402	12.3	3.3	1.1	chr21	44492510	44493069	(2216914)	+	LTR10C	LTR/ERV1	1	573	(18)	2421821
17	10.8	0.0	3.1	chr21	45643613	45643644	(1066339)	+	(GGC)n	Simple_repeat	1	32	(0)	2423032
14	24.9	3.9	0.0	chr21	45643791	45643842	(1066141)	+	(CCCGG)n	Simple_repeat	1	54	(0)	2423033
11	17.4	0.0	5.6	chr21	45644018	45644053	(1065930)	+	(CGCCGC)n	Simple_repeat	1	36	(0)	2423034
101	11.3	4.4	0.0	chr21	45981572	45981752	(728231)	+	(CCTCC)n	Simple_repeat	1	189	(0)	2423392
655	26.2	1.6	0.1	chr21	46048832	46049012	(660971)	+	L1ME1	LINE/L1	5991	6182	(2)	2423453
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
194	23.1	0.0	1.9	chr22	12174483	12174535	(38643933)	+	MER5A	DNA/hAT-Charlie	118	169	(20)	2425783
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1084	4.8	0.0	0.0	chr22	17453805	17453929	(33364539)	+	LTR10C	LTR/ERV1	467	591	(0)	2429033
265	21.9	24.9	0.4	chr22	17454001	17454146	(33364322)	+	MIRb	SINE/MIR	56	257	(5)	2429034
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
14	19.9	0.0	7.5	chr22	18906193	18906245	(31912223)	+	G-rich	Low_complexity	1	53	(0)	2431193
1935	14.6	0.3	3.2	chr22	22593711	22594018	(28224450)	+	AluSz	SINE/Alu	1	299	(13)	2437134
397	10.0	0.0	0.0	chr22	22594033	22594082	(28224386)	+	AluYj4	SINE/Alu	227	276	(35)	2437135
23	7.0	0.0	0.0	chr22	22594085	22594114	(28224354)	+	(CA)n	Simple_repeat	1	30	(0)	2437136
4078	6.1	0.0	0.0	chr22	23924979	23925501	(26892967)	+	LTR10G	LTR/ERV1	1	523	(0)	2439218
2237	9.9	0.3	0.0	chr22	23925502	23925804	(26892664)	+	AluSz	SINE/Alu	1	304	(8)	2439219
301	29.7	6.6	2.3	chr22	24270379	24270502	(26547966)	+	L2a	LINE/L2	3268	3398	(28)	2439765
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
25	25.3	2.5	1.2	chr22	24806217	24806297	(26012171)	+	(CGC)n	Simple_repeat	1	83	(0)	2440686
36	12.1	1.5	1.5	chr22	25564572	25564636	(25253832)	+	GA-rich	Low_complexity	1	66	(0)	2442496
13	0.0	0.0	0.0	chr22	25565011	25565027	(25253441)	+	(CCG)n	Simple_repeat	1	17	(0)	2442497
26	19.0	4.4	5.3	chr22	28773015	28773138	(22045330)	+	G-rich	Low_complexity	1	122	(0)	2449171
305	20.0	0.0	3.0	chr22	28773181	28773247	(22045221)	C	MIR	SINE/MIR	(118)	144	80	2449172
3584	11.7	9.2	1.0	chr22	28846714	28847294	(21971174)	+	LTR10E	LTR/ERV1	1	633	(0)	2449376
788	28.5	19.4	1.7	chr22	29766165	29766544	(21051924)	+	L2b	LINE/L2	2890	3368	(7)	2451277
12	12.1	7.9	2.4	chr22	29766978	29767015	(21051453)	+	(TCCTGCG)n	Simple_repeat	1	41	(0)	2451281
47	2.3	0.0	0.0	chr22	29982938	29982982	(20835486)	+	(TG)n	Simple_repeat	1	45	(0)	2451762
778	18.8	0.6	2.4	chr22	31017524	31017687	(19800781)	C	L1M4	LINE/L1	(1244)	4902	4742	2453791
1217	22.6	4.0	6.2	chr22	31017701	31017953	(19800515)	C	LTR10C	LTR/ERV1	(40)	593	329	2453795
2226	9.2	0.0	0.7	chr22	31017954	31018235	(19800233)	+	AluY	SINE/Alu	4	283	(28)	2453796
13	27.3	0.0	2.0	chr22	31944395	31944444	(18874024)	+	(CCCGCCC)n	Simple_repeat	1	50	(0)	2456008
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
695	24.6	5.8	1.0	chr22	36066521	36066717	(14751751)	C	MIR	SINE/MIR	(10)	252	46	2464277
2255	9.6	2.9	0.0	chr22	36066723	36067025	(14751443)	+	AluSx	SINE/Alu	1	312	(0)	2464278
14	4.0	7.7	0.0	chr22	36387753	36387778	(14430690)	+	(CCCG)n	Simple_repeat	1	28	(0)	2464883
311	26.1	1.2	4.6	chr22	36529589	36529708	(14288760)	C	MIRb	SINE/MIR	(60)	170	58	2465259
1599	17.6	4.2	0.3	chr22	36529762	36530057	(14288411)	C	AluJb	SINE/Alu	(4)	308	1	2465260
183	31.7	4.7	1.2	chr22	39310843	39310925	(11507543)	+	MIR3	SINE/MIR	11	96	(112)	2471355
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
12	12.6	0.0	3.6	chr22	40370878	40370905	(10447563)	+	G-rich	Low_complexity	1	28	(0)	2473431
25	17.7	0.0	3.3	chr22	40951150	40951210	(9867258)	+	(GCCCC)n	Simple_repeat	1	61	(0)	2474735
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
12	15.3	3.5	0.0	chr22	41833358	41833386	(8985082)	+	(GGTG)n	Simple_repeat	1	30	(0)	2476878
2576	5.2	0.7	0.0	chr22	43096036	43096342	(7722126)	+	AluYe5	SINE/Alu	1	309	(1)	2479579
1165	23.9	4.0	3.0	chr22	43096343	43096707	(7721761)	+	LTR10C	LTR/ERV1	134	562	(29)	2479578
17	15.3	0.0	0.0	chr22	43096710	43096738	(7721730)	+	(TG)n	Simple_repeat	1	29	(0)	2479580
702	12.3	0.0	0.0	chr22	44611878	44611983	(6206485)	C	AluSx	SINE/Alu	(3)	309	204	2482282
4716	7.9	1.4	0.8	chr22	44611985	44612612	(6205856)	C	LTR10E	LTR/ERV1	(1)	632	1	2482283
15	10.0	2.9	2.9	chr22	45309983	45310022	(5508446)	+	(CGCTCT)n	Simple_repeat	1	40	(0)	2483679
327	28.5	9.7	6.0	chr22	50621370	50621537	(196931)	C	L1ME3	LINE/L1	(30)	6132	5958	2490975
203	31.8	8.3	0.0	chr22	50621581	50621668	(196800)	+	L2b	LINE/L2	3244	3339	(36)	2490976
4580	5.4	3.4	0.2	chr22	50621868	50622439	(196029)	C	LTR10C	LTR/ERV1	(0)	591	1	2490977
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
209	36.7	2.4	0.0	chr3	9363318	9363437	(188932122)	+	MIR3	SINE/MIR	34	156	(52)	2507069
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
17	10.4	7.0	2.2	chr3	9769950	9769992	(188525567)	+	(GGCTC)n	Simple_repeat	1	46	(0)	2507909
4664	4.9	2.5	0.0	chr3	10245015	10245590	(188049969)	+	LTR10C	LTR/ERV1	1	591	(0)	2509036
2643	13.7	9.6	0.6	chr3	10245591	10245712	(188049847)	+	L1MB8	LINE/L1	5832	5971	(207)	2509035
2163	13.2	0.0	1.3	chr3	10245767	10246070	(188049489)	C	AluSg	SINE/Alu	(7)	303	4	2509037
331	30.1	12.1	1.9	chr3	10248046	10248201	(188047358)	+	MIRb	SINE/MIR	60	233	(35)	2509044
12	21.5	7.1	1.7	chr3	10248718	10248773	(188046786)	+	(CGGCGCC)n	Simple_repeat	1	60	(0)	2509045
573	29.7	14.9	2.0	chr3	11096105	11096458	(187199101)	+	LTR16A1	LTR/ERVL	1	408	(48)	2510743
209	18.4	0.0	0.0	chr3	11096481	11096518	(187199041)	C	MIRc	SINE/MIR	(119)	149	112	2510744
13	22.4	0.0	4.4	chr3	11719351	11719395	(186576164)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2511932
13	19.6	4.0	3.9	chr3	11719645	11719694	(186575865)	+	(AGGCC)n	Simple_repeat	1	52	(0)	2511933
3926	7.9	0.6	0.6	chr3	15656123	15656645	(182638914)	+	LTR10G	LTR/ERV1	1	523	(0)	2519217
34	29.0	0.7	4.6	chr3	18444859	18444970	(179850589)	+	G-rich	Low_complexity	6	151	(0)	2523291
12	21.4	3.3	6.3	chr3	18445150	18445210	(179850349)	+	(CGGCC)n	Simple_repeat	1	63	(0)	2523292
18	10.7	0.0	3.0	chr3	18445289	18445321	(179850238)	+	(GCC)n	Simple_repeat	1	33	(0)	2523293
13	21.8	2.6	0.0	chr3	18445552	18445589	(179849970)	+	(CTTGTTG)n	Simple_repeat	1	39	(0)	2523294
345	25.4	11.6	3.0	chr3	28241156	28241289	(170054270)	+	L2a	LINE/L2	3279	3425	(1)	2537505
13	25.0	2.7	5.3	chr3	33097152	33097224	(165198335)	+	(CCCGCGC)n	Simple_repeat	1	75	(0)	2545277
29	25.1	5.2	1.6	chr3	33440050	33440165	(164855394)	+	(GCC)n	Simple_repeat	1	122	(0)	2545866
26	24.9	1.2	2.4	chr3	33440394	33440477	(164855082)	+	(CGCCC)n	Simple_repeat	1	85	(0)	2545867
14	18.3	5.8	5.5	chr3	37176559	37176627	(161118932)	+	(GGAGGCC)n	Simple_repeat	1	73	(0)	2551103
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
1136	30.9	3.3	3.0	chr3	39180055	39180693	(159114866)	C	L2a	LINE/L2	(139)	3287	2639	2554101
484	33.0	9.3	3.4	chr3	39181187	39181516	(159114043)	+	L2a	LINE/L2	3068	3422	(4)	2554103
373	27.4	7.8	3.0	chr3	42772835	42773074	(155522485)	+	MIRc	SINE/MIR	2	259	(9)	2559634
263	29.0	16.9	0.0	chr3	44729869	44730030	(153565529)	+	MIRc	SINE/MIR	24	218	(50)	2562571
13	22.5	2.0	3.9	chr3	46812591	46812640	(151482919)	+	G-rich	Low_complexity	1	51	(0)	2565967
268	30.0	4.8	2.4	chr3	47376422	47376544	(150919015)	+	MIR3	SINE/MIR	61	186	(22)	2567026
452	14.4	2.2	9.1	chr3	47376817	47376915	(150918644)	+	MLT1B	LTR/ERVL-MaLR	1	92	(298)	2567027
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
18	16.2	1.9	5.5	chr3	47476084	47476137	(150819422)	+	(GGCCG)n	Simple_repeat	1	55	(0)	2567227
373	22.8	8.2	0.0	chr3	48617427	48617549	(149678010)	C	LTR16A	LTR/ERVL	(1)	450	317	2569616
582	29.1	9.2	0.4	chr3	48617657	48617669	(149677890)	+	Arthur1B	DNA/hAT-Tip100	277	289	(936)	2569617
4533	8.4	0.5	4.7	chr3	48617670	48618037	(149677522)	C	LTR10E	LTR/ERV1	(0)	633	286	2569618
18	25.1	1.9	1.8	chr3	51499927	51499980	(146795579)	+	(CA)n	Simple_repeat	1	55	(0)	2574460
17	13.4	2.9	2.8	chr3	51500024	51500058	(146795501)	+	(CG)n	Simple_repeat	1	36	(0)	2574461
33	0.0	0.0	0.0	chr3	51500117	51500152	(146795407)	+	(A)n	Simple_repeat	1	36	(0)	2574462
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
2397	7.2	0.3	0.3	chr3	51976395	51976698	(146318861)	+	AluSg4	SINE/Alu	1	304	(6)	2575247
15	23.3	3.5	6.7	chr3	52278686	52278771	(146016788)	+	G-rich	Low_complexity	1	89	(0)	2575687
17	20.8	4.0	0.0	chr3	52685591	52685640	(145609919)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2576289
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
27	13.9	3.6	0.0	chr3	56468325	56468380	(141827179)	+	(GGAGCC)n	Simple_repeat	1	58	(0)	2582184
14	7.2	0.0	8.6	chr3	56468451	56468485	(141827074)	+	G-rich	Low_complexity	1	35	(0)	2582185
19	31.7	1.0	3.8	chr3	58237792	58237895	(140057664)	+	G-rich	Low_complexity	1	105	(0)	2585629
15	16.5	8.9	1.6	chr3	58332712	58332767	(139962792)	+	(GCGCAG)n	Simple_repeat	1	61	(0)	2585826
16	26.4	1.4	4.2	chr3	58333103	58333172	(139962387)	+	G-rich	Low_complexity	1	71	(0)	2585827
1173	24.0	16.7	3.2	chr3	66776387	66776882	(131518677)	+	L2	LINE/L2	89	664	(2755)	2599857
16	16.6	3.9	3.8	chr3	71064851	71064901	(127230658)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	2606644
14	21.0	6.2	2.9	chr3	71064928	71064991	(127230568)	+	(CGCGC)n	Simple_repeat	1	68	(0)	2606645
14	24.0	0.0	0.0	chr3	71064963	71065001	(127230558)	+	(CGCCC)n	Simple_repeat	1	39	(0)	2606646
28	0.0	0.0	0.0	chr3	71065026	71065052	(127230507)	+	(CCGCG)n	Simple_repeat	1	27	(0)	2606647
17	13.9	0.0	6.7	chr3	71065067	71065111	(127230448)	+	(CCGCGC)n	Simple_repeat	1	45	(0)	2606648
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
19	0.0	3.7	0.0	chr3	87269775	87269801	(111025758)	+	(TTTGT)n	Simple_repeat	1	28	(0)	2629327
12	8.0	0.0	9.4	chr3	87270034	87270065	(111025494)	+	(TTTTG)n	Simple_repeat	1	32	(0)	2629328
14	14.2	0.0	5.7	chr3	88058632	88058666	(110236893)	+	(GGC)n	Simple_repeat	1	35	(0)	2630310
23	22.5	4.5	3.3	chr3	88058915	88059002	(110236557)	+	(CCG)n	Simple_repeat	1	92	(0)	2630311
25	23.8	4.4	1.1	chr3	98901145	98901234	(99394325)	+	(AGGAGC)n	Simple_repeat	1	94	(0)	2639604
14	28.2	0.0	1.9	chr3	98901217	98901273	(99394286)	+	G-rich	Low_complexity	1	55	(0)	2639605
13	16.9	3.0	0.0	chr3	98901541	98901573	(99393986)	+	GA-rich	Low_complexity	1	34	(0)	2639606
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
233	28.7	11.7	10.8	chr3	102098967	102099161	(96196398)	+	MIR3	SINE/MIR	9	205	(3)	2644065
27	13.1	2.0	0.0	chr3	113211448	113211497	(85084062)	+	(CTC)n	Simple_repeat	1	51	(0)	2658907
36	25.1	2.9	0.9	chr3	113211709	113211813	(85083746)	+	(CA)n	Simple_repeat	1	108	(0)	2658908
20	25.1	3.1	5.0	chr3	113212133	113212230	(85083329)	+	G-rich	Low_complexity	1	101	(0)	2658909
472	29.1	11.7	3.1	chr3	113469847	113470133	(84825426)	+	LTR79	LTR/ERVL	151	465	(62)	2659243
22	10.0	4.7	0.0	chr3	113838845	113838887	(84456672)	+	(GGTGC)n	Simple_repeat	1	45	(0)	2659865
12	24.4	3.2	4.6	chr3	115784294	115784356	(82511203)	+	G-rich	Low_complexity	1	65	(0)	2662585
23	28.4	2.0	3.0	chr3	115784357	115784388	(82511171)	+	(GCGG)n	Simple_repeat	5	101	(0)	2662586
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
202	34.2	0.0	11.2	chr3	119241221	119241345	(79054214)	+	MIR	SINE/MIR	84	194	(68)	2667270
12	14.7	3.3	0.0	chr3	119322765	119322794	(78972765)	+	(GCTCCT)n	Simple_repeat	1	31	(0)	2667375
22	24.2	0.0	0.0	chr3	119323450	119323513	(78972046)	+	(T)n	Simple_repeat	1	64	(0)	2667376
13	18.2	0.0	0.0	chr3	122795234	122795264	(75500295)	+	G-rich	Low_complexity	1	31	(0)	2672621
15	17.6	0.0	0.0	chr3	122795282	122795313	(75500246)	+	(GGC)n	Simple_repeat	1	32	(0)	2672622
13	13.1	0.0	0.0	chr3	124584966	124585000	(73710559)	+	(GAGG)n	Simple_repeat	1	35	(0)	2675536
3296	9.1	0.2	0.7	chr3	126197803	126198236	(72097323)	C	MER57A1	LTR/ERV1	(0)	432	1	2678237
13	17.8	5.3	0.0	chr3	126213108	126213145	(72082414)	+	(CCCCT)n	Simple_repeat	1	40	(0)	2678260
12	27.2	5.3	0.0	chr3	126524196	126524252	(71771307)	+	(GCTGC)n	Simple_repeat	1	60	(0)	2678727
14	26.6	0.0	7.7	chr3	126524382	126524459	(71771100)	+	(GCGCCC)n	Simple_repeat	1	78	(0)	2678728
12	23.8	0.0	6.0	chr3	126654636	126654685	(71640874)	+	(CCGGC)n	Simple_repeat	1	50	(0)	2678890
467	24.6	5.8	1.9	chr3	128681421	128681623	(69613936)	+	L1ME4b	LINE/L1	506	673	(219)	2682212
2117	13.3	2.9	2.1	chr3	129917227	129917682	(68377877)	+	LTR10E	LTR/ERV1	1	612	(21)	2684665
16	14.2	4.7	7.5	chr3	130894016	130894079	(67401480)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	2686147
24	10.6	0.0	8.3	chr3	130894131	130894190	(67401369)	+	(CCCT)n	Simple_repeat	1	60	(0)	2686148
19	18.6	9.2	1.2	chr3	130894191	130894204	(67401355)	+	(TCCTC)n	Simple_repeat	3	83	(0)	2686149
3048	0.6	0.0	0.0	chr3	132277299	132277616	(66017943)	+	AluYb8	SINE/Alu	1	318	(0)	2688217
3448	10.2	13.1	5.7	chr3	132277617	132277866	(66017693)	+	LTR10E	LTR/ERV1	386	633	(0)	2688218
835	15.2	0.0	8.8	chr3	132277867	132277910	(66017649)	C	LTR8	LTR/ERV1	(656)	35	1	2688215
2231	11.6	5.2	0.3	chr3	132277911	132278256	(66017303)	+	MER39B	LTR/ERV1	290	653	(0)	2688212
732	15.1	5.4	1.4	chr3	142232091	142232231	(56063328)	+	Arthur1B	DNA/hAT-Tip100	1	147	(1078)	2703782
301	27.0	0.0	2.6	chr3	142232234	142232309	(56063250)	+	Arthur1C	DNA/hAT-Tip100	288	361	(2)	2703783
1284	18.9	3.4	3.0	chr3	142232502	142232768	(56062791)	C	LTR10E	LTR/ERV1	(28)	605	338	2703784
673	6.9	1.0	4.7	chr3	142232770	142232876	(56062683)	C	LTR10E	LTR/ERV1	(530)	103	1	2703785
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
11	15.3	11.4	0.0	chr3	142723949	142723992	(55571567)	+	(CCGCAGGCC)n	Simple_repeat	1	49	(0)	2704607
19	15.0	0.0	0.0	chr3	142724476	142724512	(55571047)	+	G-rich	Low_complexity	1	37	(0)	2704608
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
16	6.1	8.8	0.0	chr3	156816142	156816175	(41479384)	+	(GCGCT)n	Simple_repeat	1	37	(0)	2724604
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
443	29.6	3.6	1.2	chr3	157089356	157089516	(41206043)	C	MIR3	SINE/MIR	(5)	203	39	2724955
31	8.3	0.0	3.6	chr3	159763931	159763985	(38531574)	+	(GGGCG)n	Simple_repeat	1	55	(0)	2728699
15	17.9	0.0	0.0	chr3	160226116	160226147	(38069412)	+	(GGC)n	Simple_repeat	1	32	(0)	2729486
11	21.8	0.0	4.9	chr3	169662565	169662605	(28632954)	+	(GCCCCC)n	Simple_repeat	1	41	(0)	2741631
13	25.5	5.5	2.6	chr3	169662638	169662710	(28632849)	+	(CGCAG)n	Simple_repeat	1	77	(0)	2741632
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
13	14.4	3.2	0.0	chr3	170357188	170357218	(27938341)	+	G-rich	Low_complexity	1	32	(0)	2742885
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
18	16.0	0.0	0.0	chr3	170908597	170908631	(27386928)	+	(GCG)n	Simple_repeat	1	35	(0)	2743786
193	33.1	4.4	4.4	chr3	184133940	184134075	(14161484)	C	L3b	LINE/CR1	(242)	4990	4855	2764087
15	13.9	0.0	0.0	chr3	191329933	191329956	(6965603)	+	(G)n	Simple_repeat	1	24	(0)	2776383
12	25.7	0.0	6.9	chr3	194633185	194633242	(3662317)	+	(GCGCG)n	Simple_repeat	1	58	(0)	2781547
18	20.1	4.4	6.4	chr3	196712477	196712566	(1582993)	+	(TCCGGCG)n	Simple_repeat	1	94	(0)	2785607
17	22.6	2.7	5.3	chr3	197003012	197003085	(1292474)	+	G-rich	Low_complexity	1	76	(0)	2786205
19	13.7	0.0	8.8	chr3	197003355	197003411	(1292148)	+	G-rich	Low_complexity	1	57	(0)	2786206
4882	5.1	0.2	0.0	chr4	694300	694889	(189519666)	+	LTR10C	LTR/ERV1	1	591	(0)	2789412
1244	12.4	0.0	3.2	chr4	694890	695023	(189519532)	+	AluSx	SINE/Alu	183	311	(1)	2789411
2445	7.2	0.3	0.3	chr4	757887	758192	(189456363)	+	AluSc	SINE/Alu	1	306	(3)	2789491
634	25.3	21.2	0.6	chr4	782342	782655	(189431900)	+	L2a	LINE/L2	3017	3412	(14)	2789517
12	22.6	5.7	1.8	chr4	1513269	1513321	(188701234)	+	(GCGGCCG)n	Simple_repeat	1	56	(0)	2790271
31	21.1	5.0	4.0	chr4	1684328	1684446	(188530109)	+	(CCG)n	Simple_repeat	1	125	(0)	2790462
2592	14.9	3.7	0.9	chr4	1738560	1739026	(188475529)	C	LTR10A	LTR/ERV1	(66)	543	61	2790557
19	22.9	0.0	0.0	chr4	2963881	2963926	(187250629)	+	(GCG)n	Simple_repeat	1	46	(0)	2792483
3574	12.5	2.0	1.5	chr4	6058211	6058809	(184155746)	+	LTR10E	LTR/ERV1	1	602	(31)	2797672
690	24.5	1.3	0.0	chr4	6058984	6059138	(184155417)	C	MIR	SINE/MIR	(95)	167	11	2797673
18	20.2	1.6	4.8	chr4	6575106	6575167	(183639388)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	2798642
14	22.2	2.3	2.2	chr4	6575216	6575259	(183639296)	+	(GCT)n	Simple_repeat	1	45	(0)	2798643
89	8.9	1.5	0.7	chr4	6774757	6774892	(183439663)	+	(AAGA)n	Simple_repeat	1	138	(0)	2799072
271	31.6	12.1	1.9	chr4	6775072	6775226	(183439329)	+	MIR3	SINE/MIR	15	187	(21)	2799073
22	25.1	1.1	4.5	chr4	9691467	9691553	(180523002)	+	(CCGGCC)n	Simple_repeat	1	88	(0)	2803436
17	21.1	4.7	3.0	chr4	9691684	9691747	(180522808)	+	(GCCCCA)n	Simple_repeat	1	67	(0)	2803437
418	28.0	7.7	0.0	chr4	9691991	9692133	(180522422)	+	MIR	SINE/MIR	108	262	(0)	2803438
2265	16.1	4.2	2.5	chr4	24863663	24864107	(165350448)	+	LTR10E	LTR/ERV1	181	633	(0)	2827870
2661	20.3	4.6	4.7	chr4	24864111	24864724	(165349831)	+	LTR8A	LTR/ERV1	115	727	(0)	2827871
2175	14.7	2.2	3.2	chr4	26406461	26406890	(163807665)	C	LTR10E	LTR/ERV1	(43)	590	161	2831011
10453	7.1	4.8	5.2	chr4	31996207	31997789	(158216766)	+	LTR12C	LTR/ERV1	3	1579	(0)	2838855
12	25.3	3.8	1.8	chr4	38664311	38664363	(151550192)	+	(CGCC)n	Simple_repeat	1	55	(0)	2848198
13	19.6	0.0	0.0	chr4	39365944	39365973	(150848582)	+	(CCTT)n	Simple_repeat	1	30	(0)	2849468
19	0.0	0.0	6.5	chr4	39977560	39977590	(150236965)	+	(CCG)n	Simple_repeat	1	31	(0)	2850913
14	13.4	2.1	8.2	chr4	40857167	40857214	(149357341)	+	(CGCC)n	Simple_repeat	1	49	(0)	2852979
20	25.4	1.6	1.6	chr4	41216400	41216413	(148998142)	+	(GCG)n	Simple_repeat	1	31	(33)	2853654
25	11.8	0.0	0.0	chr4	41216414	41216450	(148998105)	+	(G)n	Simple_repeat	1	37	(0)	2853655
20	25.4	1.6	1.6	chr4	41216451	41216462	(148998093)	+	(GCG)n	Simple_repeat	32	64	(0)	2853654
12	19.1	5.9	3.7	chr4	42656945	42656995	(147557560)	+	(CCGCG)n	Simple_repeat	1	54	(0)	2855920
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
7847	20.4	6.1	2.5	chr4	49268140	49270555	(140944000)	+	L1M4	LINE/L1	3095	5610	(570)	2865041
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
539	31.6	7.7	3.2	chr4	53168255	53168600	(137045955)	+	L1MEd	LINE/L1	538	900	(6186)	2867343
20	20.6	2.0	0.0	chr4	56049161	56049210	(134165345)	+	(TGC)n	Simple_repeat	1	51	(0)	2871924
14	24.6	3.3	3.2	chr4	56049218	56049278	(134165277)	+	(GCCG)n	Simple_repeat	1	63	(0)	2871925
12	13.6	6.8	4.3	chr4	56049424	56049467	(134165088)	+	G-rich	Low_complexity	1	47	(0)	2871926
15	13.7	0.0	5.6	chr4	56908351	56908386	(133306169)	+	(CGG)n	Simple_repeat	1	36	(0)	2873605
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
17	11.6	0.0	0.0	chr4	70705259	70705287	(119509268)	+	(GCG)n	Simple_repeat	1	29	(0)	2891024
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
12	20.4	5.6	3.5	chr4	70902418	70902471	(119312084)	+	(CTCCTGT)n	Simple_repeat	1	57	(0)	2891447
263	33.5	10.2	6.2	chr4	76306016	76306193	(113908362)	C	MIR3	SINE/MIR	(16)	192	7	2899053
16	16.6	0.0	0.0	chr4	78939644	78939670	(111274885)	+	(T)n	Simple_repeat	1	27	(0)	2902973
12	13.9	0.0	0.0	chr4	80072759	80072782	(110141773)	+	(CCG)n	Simple_repeat	1	24	(0)	2904351
15	22.8	1.8	3.6	chr4	82044169	82044223	(108170332)	+	G-rich	Low_complexity	1	56	(0)	2907008
13	13.2	6.1	0.0	chr4	82430020	82430052	(107784503)	+	(GCGC)n	Simple_repeat	1	35	(0)	2907601
415	24.5	4.7	12.4	chr4	86878110	86878342	(103336213)	+	MER102c	DNA/hAT-Charlie	116	329	(2)	2914511
653	31.1	8.6	4.7	chr4	86878406	86878749	(103335806)	+	L1M3d	LINE/L1	1	359	(5532)	2914512
23	0.0	0.0	0.0	chr4	94757884	94757908	(95456647)	+	(A)n	Simple_repeat	1	25	(0)	2925516
12	25.6	0.0	0.0	chr4	98658520	98658556	(91555999)	+	(CGTC)n	Simple_repeat	1	37	(0)	2930459
26	22.0	4.8	5.4	chr4	98658600	98658723	(91555832)	+	(CGCT)n	Simple_repeat	1	130	(0)	2930460
29	19.8	1.9	4.4	chr4	98995507	98995586	(91218969)	+	G-rich	Low_complexity	1	78	(0)	2931108
21028	29.4	3.9	3.5	chr4	99013920	99021508	(91193047)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	1	2931140
1170	22.6	4.3	3.8	chr4	99021525	99021908	(91192647)	C	LTR10C	LTR/ERV1	(43)	590	96	2931141
15	26.6	0.0	0.0	chr4	102345350	102345394	(87869161)	+	(CTGT)n	Simple_repeat	1	45	(0)	2935547
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
234	19.1	0.0	0.0	chr4	105474368	105474409	(84740146)	C	L2a	LINE/L2	(22)	3404	3363	2939524
25	18.8	2.9	1.4	chr4	107824859	107824926	(82389629)	+	G-rich	Low_complexity	1	70	(0)	2942568
15	12.2	0.0	0.0	chr4	109302706	109302732	(80911823)	+	(GTGA)n	Simple_repeat	1	27	(0)	2944734
13	25.1	6.6	0.0	chr4	109302732	109302792	(80911763)	+	(GCGCCCG)n	Simple_repeat	1	65	(0)	2944735
17	21.4	10.2	1.0	chr4	118033558	118033645	(72180910)	+	G-rich	Low_complexity	1	97	(0)	2956363
34	5.6	0.0	0.0	chr4	125315055	125315092	(64899463)	+	(TG)n	Simple_repeat	1	38	(0)	2966465
12	11.9	0.0	6.5	chr4	128809779	128809809	(61404746)	+	(GCCC)n	Simple_repeat	1	31	(0)	2971405
20	29.9	4.9	0.0	chr4	128809881	128809962	(61404593)	+	(CG)n	Simple_repeat	1	86	(0)	2971406
29	3.2	0.0	0.0	chr4	128809973	128810004	(61404551)	+	(GCG)n	Simple_repeat	1	32	(0)	2971407
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	18.8	0.0	8.0	chr4	128812373	128812422	(61402133)	+	(CGGCGCG)n	Simple_repeat	1	50	(0)	2971410
1744	19.1	5.2	1.8	chr4	136830245	136830634	(53383921)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	3	2980938
13	17.8	5.3	0.0	chr4	139177126	139177163	(51037392)	+	(CCGCC)n	Simple_repeat	1	40	(0)	2984094
15	17.7	3.5	6.7	chr4	139177227	139177304	(51037251)	+	(CCT)n	Simple_repeat	1	75	(0)	2984095
13	15.5	11.9	1.5	chr4	140427653	140427711	(49786844)	+	(GCGCGT)n	Simple_repeat	1	66	(0)	2986212
12	16.8	0.0	5.4	chr4	141220665	141220701	(48993854)	+	(TTCCTT)n	Simple_repeat	1	37	(0)	2987428
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
3281	22.2	2.3	9.9	chr4	147983485	147984198	(42230357)	C	L1PA17	LINE/L1	(4706)	1887	1239	2996541
778	28.7	1.4	3.7	chr4	147984252	147984548	(42230007)	C	L1PA17	LINE/L1	(6003)	870	581	2996541
21	23.5	1.5	2.9	chr4	150078208	150078275	(40136280)	+	(CTC)n	Simple_repeat	1	69	(0)	2999259
11	21.7	0.0	4.9	chr4	150078726	150078766	(40135789)	+	G-rich	Low_complexity	1	41	(0)	2999260
1333	12.4	0.0	0.0	chr4	151548640	151548816	(38665739)	+	AluSx	SINE/Alu	1	177	(135)	3001678
2962	14.7	2.0	1.3	chr4	151548817	151549381	(38665174)	C	LTR10A	LTR/ERV1	(65)	544	1	3001679
1132	16.2	0.5	0.0	chr4	155552054	155552251	(34662304)	+	L1PBa	LINE/L1	2	200	(6663)	3007590
10107	10.2	4.4	1.5	chr4	155552254	155554434	(34660121)	+	L1PBa	LINE/L1	636	3021	(3841)	3007590
335	22.9	11.2	1.1	chr4	157045670	157045788	(33168767)	+	MamGypLTR3	LTR/Gypsy	571	727	(254)	3009609
219	34.2	5.6	8.6	chr4	157045989	157046209	(33168346)	+	L2c	LINE/L2	3127	3340	(47)	3009610
18	12.2	2.6	0.0	chr4	163494143	163494171	(26720384)	+	(AAGAA)n	Simple_repeat	1	30	(0)	3018139
33	5.3	0.0	0.0	chr4	163494172	163494211	(26720344)	+	(GGGCA)n	Simple_repeat	1	40	(0)	3018140
4395	6.7	5.8	2.6	chr4	169090343	169090954	(21123601)	C	LTR10E	LTR/ERV1	(0)	633	1	3025801
988	10.7	5.1	2.0	chr4	169090965	169091117	(21123438)	+	LTR10E	LTR/ERV1	455	612	(21)	3025802
2360	10.4	0.0	1.0	chr4	169091168	169091475	(21123080)	C	AluSq	SINE/Alu	(8)	305	1	3025803
2664	20.4	0.6	0.4	chr4	175455087	175455587	(14758968)	C	LTR1E	LTR/ERV1	(0)	804	303	3034200
6400	14.1	1.9	3.6	chr4	175455607	175456817	(14757738)	C	PRIMA41-int	LTR/ERV1	(5367)	1391	202	3034195
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
29	2.6	0.0	2.4	chr5	11838	11879	(181526380)	+	(GACCCC)n	Simple_repeat	1	42	(0)	3054966
7973	10.4	3.5	1.2	chr5	11943	13334	(181524925)	C	TAR1	Satellite/telo	(43)	2068	644	3054967
294	18.5	0.0	0.0	chr5	13334	13385	(181524874)	C	MLT2B3	LTR/ERVL	(341)	213	162	3054968
1006	9.3	0.7	0.0	chr5	1594932	1595071	(179943188)	C	AluJr4	SINE/Alu	(171)	141	1	3056396
13	13.6	6.8	4.3	chr5	6633477	6633520	(174904739)	+	(GCC)n	Simple_repeat	1	47	(0)	3062115
18	20.4	5.4	0.0	chr5	14581967	14582022	(166956237)	+	G-rich	Low_complexity	1	59	(0)	3072380
15	21.8	0.0	0.0	chr5	22853073	22853109	(158685150)	+	(GCA)n	Simple_repeat	1	37	(0)	3083982
368	25.4	9.5	10.9	chr5	27471801	27472056	(154066203)	+	L1MEf	LINE/L1	1523	1774	(4966)	3089958
2201	17.4	1.7	1.4	chr5	27472074	27472487	(154065772)	+	MER61C	LTR/ERV1	14	428	(0)	3089960
697	19.6	6.4	4.1	chr5	31638707	31638903	(149899356)	+	MamRep488	DNA/hAT-Tip100	15	216	(3)	3095274
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
2277	7.3	1.4	0.3	chr5	37378645	37378931	(144159328)	+	AluSx1	SINE/Alu	20	309	(3)	3104395
1136	9.2	9.4	0.0	chr5	37378943	37379106	(144159153)	+	AluSx	SINE/Alu	121	301	(11)	3104396
15	22.2	3.7	1.8	chr5	37840055	37840108	(143698151)	+	G-rich	Low_complexity	1	56	(0)	3105101
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
19	23.3	1.4	5.4	chr5	40798198	40798270	(140739989)	+	G-rich	Low_complexity	1	74	(0)	3109434
17	15.0	4.3	2.1	chr5	57173958	57174003	(124364256)	+	(CTCC)n	Simple_repeat	1	48	(0)	3126300
4107	8.4	1.9	3.6	chr5	57232267	57232868	(124305391)	+	LTR10C	LTR/ERV1	1	591	(0)	3126438
596	23.4	0.0	4.8	chr5	57232869	57232909	(124305350)	C	FLAM_C	SINE/Alu	(109)	24	1	3126437
18	20.4	5.6	2.7	chr5	65925578	65925648	(115612611)	+	(CTGCCCC)n	Simple_repeat	1	75	(0)	3138687
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
18	19.8	0.0	4.0	chr5	73436796	73436845	(108101414)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3150475
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
29	31.5	0.0	7.3	chr5	77630068	77630145	(103908114)	+	(GGCGG)n	Simple_repeat	1	191	(0)	3156915
27	19.2	4.4	5.9	chr5	77630146	77630258	(103908001)	+	G-rich	Low_complexity	1	118	(0)	3156916
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
20	3.4	0.0	3.1	chr5	83474842	83474873	(98063386)	+	(TATTT)n	Simple_repeat	1	32	(0)	3166017
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
2122	14.2	0.0	0.0	chr5	97184119	97184414	(84353845)	C	AluSx	SINE/Alu	(14)	298	3	3183680
1506	19.4	3.0	0.4	chr5	98736853	98737212	(82801047)	+	L1MEb	LINE/L1	1411	1755	(4487)	3185495
6864	8.3	0.4	0.7	chr5	98737216	98739296	(82798963)	+	L1PA5	LINE/L1	4	1090	(5094)	3185496
2061	17.4	2.3	5.4	chr5	104316794	104317208	(77221051)	+	LTR10E	LTR/ERV1	161	570	(63)	3192550
2502	9.1	0.0	0.0	chr5	104317209	104317516	(77220743)	C	AluY	SINE/Alu	(3)	308	1	3192551
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
21	0.0	0.0	0.0	chr5	107672507	107672529	(73865730)	+	(T)n	Simple_repeat	1	23	(0)	3196633
20	25.9	5.6	1.1	chr5	111224137	111224183	(70314076)	+	G-rich	Low_complexity	1	91	(0)	3201161
13	15.8	2.6	5.0	chr5	111224184	111224222	(70314037)	+	GA-rich	Low_complexity	1	40	(0)	3201162
24	15.1	0.0	5.3	chr5	111224406	111224462	(70313797)	+	(GGC)n	Simple_repeat	1	57	(0)	3201163
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
387	32.6	1.5	0.0	chr5	113513394	113513522	(68024737)	+	L2a	LINE/L2	3296	3426	(0)	3204398
2387	8.2	0.3	0.0	chr5	116545289	116545580	(64992679)	+	AluSq2	SINE/Alu	1	293	(20)	3208257
2076	17.1	3.0	12.8	chr5	116545581	116545706	(64992553)	+	LTR10A	LTR/ERV1	422	543	(66)	3208256
211	27.0	0.0	6.3	chr5	119267865	119267943	(62270316)	+	L2c	LINE/L2	3314	3387	(0)	3212074
504	26.4	1.4	0.0	chr5	126595497	126595640	(54942619)	C	MER5A1	DNA/hAT-Charlie	(0)	166	21	3221484
4577	6.2	1.7	0.2	chr5	126599796	126600372	(54937887)	+	LTR10C	LTR/ERV1	6	591	(0)	3221497
387	20.7	5.1	0.3	chr5	126600436	126600565	(54937694)	C	MER2B	DNA/TcMar-Tigger	(0)	336	97	3221498
13	17.7	5.3	0.0	chr5	127073159	127073196	(54465063)	+	(TGCTTTC)n	Simple_repeat	1	40	(0)	3222378
13	23.2	3.9	1.9	chr5	127073502	127073553	(54464706)	+	(CGCCCCA)n	Simple_repeat	1	54	(0)	3222379
12	19.9	2.3	4.4	chr5	131164982	131165025	(50373234)	+	(TCCCC)n	Simple_repeat	1	45	(0)	3227449
17	24.2	1.6	3.2	chr5	132369671	132369732	(49168527)	+	(CCCGC)n	Simple_repeat	1	63	(0)	3229279
218	30.0	1.4	4.1	chr5	132411320	132411392	(49126867)	+	MIRb	SINE/MIR	161	231	(37)	3229317
16	13.7	4.8	2.3	chr5	134114635	134114676	(47423583)	+	(CCCGC)n	Simple_repeat	1	44	(0)	3231963
13	11.5	5.4	8.5	chr5	134114711	134114766	(47423493)	+	(CCCGCAG)n	Simple_repeat	1	59	(0)	3231964
17	20.9	2.3	0.0	chr5	134114924	134114967	(47423292)	+	(CGG)n	Simple_repeat	1	45	(0)	3231965
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
420	30.3	2.7	5.3	chr5	138491474	138491661	(43046598)	C	MIRb	SINE/MIR	(49)	219	37	3238970
258	30.8	5.3	2.2	chr5	138492575	138492739	(43045520)	+	L2c	LINE/L2	3019	3190	(185)	3238971
14	11.2	0.0	6.1	chr5	140346522	140346554	(41191705)	+	(GCCC)n	Simple_repeat	1	33	(0)	3242425
13	20.8	0.0	0.0	chr5	140346653	140346685	(41191574)	+	(GCCCC)n	Simple_repeat	1	33	(0)	3242426
14	28.5	3.1	1.5	chr5	142108653	142108717	(39429542)	+	G-rich	Low_complexity	1	67	(0)	3245269
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
14	8.2	3.9	0.0	chr5	142109392	142109417	(39428842)	+	(AAAG)n	Simple_repeat	1	27	(0)	3245271
1507	19.0	2.1	1.1	chr5	154885868	154886149	(26652110)	+	LTR10B2	LTR/ERV1	219	503	(0)	3268241
1332	10.7	0.0	0.0	chr5	154886150	154886318	(26651941)	C	AluSx	SINE/Alu	(143)	169	1	3268242
299	33.1	4.1	6.8	chr5	158452280	158452603	(23085656)	C	UCON78	DNA	(0)	443	129	3274617
133	24.4	4.0	4.9	chr5	159098439	159098991	(22439268)	+	GA-rich	Low_complexity	1	575	(0)	3275544
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
15	9.9	0.0	7.9	chr5	159916274	159916323	(21621936)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	3276975
16	7.0	6.7	0.0	chr5	159916674	159916703	(21621556)	+	(CCT)n	Simple_repeat	1	32	(0)	3276976
3714	10.5	1.1	1.0	chr5	160186164	160186735	(21351524)	+	LTR10C	LTR/ERV1	1	529	(62)	3277597
1637	15.4	4.4	4.1	chr5	160186866	160187157	(21351102)	+	AluSz	SINE/Alu	2	294	(18)	3277598
11	9.9	5.6	5.3	chr5	163437836	163437871	(18100388)	+	(GGTGCG)n	Simple_repeat	1	38	(0)	3282556
2194	17.7	1.9	2.4	chr5	164119721	164120137	(17418122)	C	MER61C	LTR/ERV1	(0)	428	14	3283579
264	22.0	0.0	0.0	chr5	164120105	164120154	(17418105)	C	LTR28	LTR/ERV1	(958)	62	13	3283580
856	22.8	5.5	8.3	chr5	164120146	164120542	(17417717)	C	MLT1A	LTR/ERVL-MaLR	(16)	374	1	3283581
29	18.1	2.5	3.7	chr5	168291770	168291849	(13246410)	+	(GGC)n	Simple_repeat	1	82	(0)	3289721
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
16	15.4	4.4	2.1	chr5	169300641	169300685	(12237574)	+	(CGCCAG)n	Simple_repeat	1	47	(0)	3291587
12	19.0	7.1	0.0	chr5	170744230	170744271	(10793988)	+	(GGATG)n	Simple_repeat	1	45	(0)	3294227
446	18.3	3.5	0.0	chr5	170744798	170744879	(10793380)	+	MER45A	DNA/hAT-Tip100	60	144	(34)	3294228
1902	13.0	1.4	0.3	chr5	170744929	170745212	(10793047)	C	AluJb	SINE/Alu	(25)	287	1	3294229
36	19.8	1.1	2.2	chr5	170861784	170861873	(10676386)	+	(CGCCC)n	Simple_repeat	1	91	(0)	3294424
12	10.0	0.0	0.0	chr5	170861996	170862017	(10676242)	+	(GCCG)n	Simple_repeat	1	22	(0)	3294425
17	12.9	4.5	2.2	chr5	170862120	170862163	(10676096)	+	G-rich	Low_complexity	1	46	(0)	3294426
14	9.6	10.4	3.8	chr5	171419420	171419467	(10118792)	+	(AGGC)n	Simple_repeat	1	53	(0)	3295243
15	24.0	2.0	1.9	chr5	171419565	171419615	(10118644)	+	(CCGGCC)n	Simple_repeat	1	52	(0)	3295244
14	23.7	0.0	4.2	chr5	171419854	171419901	(10118358)	+	(GCCG)n	Simple_repeat	1	48	(0)	3295245
18	10.3	2.0	8.0	chr5	171420047	171420095	(10118164)	+	(AGC)n	Simple_repeat	1	50	(0)	3295246
31	3.1	0.0	0.0	chr5	171420096	171420128	(10118131)	+	(GCG)n	Simple_repeat	1	33	(0)	3295247
17	39.2	1.1	0.0	chr5	171420262	171420355	(10117904)	+	(TGTC)n	Simple_repeat	1	95	(0)	3295248
720	30.3	12.3	1.3	chr5	171979593	171979696	(9558563)	+	L1ME2	LINE/L1	4910	5036	(1110)	3296406
4871	5.1	0.0	0.0	chr5	171979697	171980287	(9557972)	C	LTR10C	LTR/ERV1	(0)	591	1	3296407
198	18.5	8.5	3.0	chr5	172640928	172640994	(8897265)	+	L2b	LINE/L2	3302	3372	(3)	3297895
13	13.2	6.1	0.0	chr5	172641169	172641215	(8897044)	+	(GGAGGC)n	Simple_repeat	1	49	(0)	3297896
19	28.0	0.0	2.9	chr5	172641218	172641285	(8896974)	+	(CCG)n	Simple_repeat	1	68	(0)	3297897
17	23.9	5.2	2.5	chr5	172641286	172641292	(8896967)	+	(CTCCGC)n	Simple_repeat	3	81	(0)	3297898
4159	20.8	8.6	2.0	chr5	174324217	174325385	(7212874)	+	Charlie1	DNA/hAT-Charlie	1456	2708	(73)	3301286
23	17.8	3.9	4.9	chr5	174721062	174721139	(6817120)	+	G-rich	Low_complexity	1	81	(0)	3302103
3551	13.1	1.4	2.1	chr5	177857543	177858127	(3680132)	+	LTR10C	LTR/ERV1	1	529	(62)	3308108
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
12	4.5	4.0	3.9	chr5	180071843	180071867	(1466392)	+	(CGC)n	Simple_repeat	1	26	(0)	3312026
1700	17.3	4.1	0.6	chr5	180072515	180072840	(1465419)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	3312027
11	27.9	1.6	4.8	chr5	180619104	180619165	(919094)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3312984
17	26.4	4.6	1.5	chr5	180619152	180619216	(919043)	+	(GC)n	Simple_repeat	1	68	(0)	3312985
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
682	20.5	0.0	0.0	chr5	181181764	181181890	(356369)	C	AluJb	SINE/Alu	(6)	306	180	3313810
396	29.4	7.0	0.0	chr5	181181893	181182038	(356221)	C	Charlie4a	DNA/hAT-Charlie	(316)	192	36	3313808
230	4.5	1.1	4.8	chr6	147636	147986	(170657993)	+	(CTAACC)n	Simple_repeat	1	355	(0)	3314431
2053	19.6	3.8	1.5	chr6	147987	149049	(170656930)	C	TAR1	Satellite/telo	(237)	1087	1	3314432
1833	21.7	4.1	3.1	chr6	4383883	4384327	(166421652)	+	LTR10B1	LTR/ERV1	1	547	(0)	3320358
9051	25.3	4.8	5.7	chr6	4384329	4387618	(166418361)	+	HERVIP10F-int	LTR/ERV1	1	3223	(4562)	3320358
17	9.7	2.9	2.8	chr6	5026336	5026370	(165779609)	+	G-rich	Low_complexity	1	36	(0)	3321377
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
2279	8.5	0.7	4.9	chr6	16128275	16128637	(154677342)	C	AluSq	SINE/Alu	(0)	313	3	3339044
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
20	23.4	1.2	6.9	chr6	18155430	18155515	(152650464)	+	(GGC)n	Simple_repeat	1	87	(0)	3342550
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
11	18.0	9.1	0.0	chr6	20403201	20403244	(150402735)	+	(GGTGGA)n	Simple_repeat	1	48	(0)	3345987
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
26	26.9	1.2	1.1	chr6	20403657	20403742	(150402237)	+	(CGCCCC)n	Simple_repeat	1	87	(0)	3345989
12	8.8	10.5	2.4	chr6	20403887	20403924	(150402055)	+	(GTTGAGCG)n	Simple_repeat	1	42	(0)	3345990
1270	27.0	5.2	2.5	chr6	21422291	21422851	(149383128)	C	L1MC4a	LINE/L1	(1827)	6055	5580	3347616
5417	13.3	14.8	2.7	chr6	21422858	21423960	(149382019)	C	MER52C	LTR/ERV1	(18)	1260	2	3347617
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
2287	8.8	0.3	0.0	chr6	28757384	28757677	(142048302)	C	AluSp	SINE/Alu	(16)	297	3	3359168
23528	22.9	2.0	2.2	chr6	31329941	31336966	(139469013)	C	HERVIP10B3-int	LTR/ERV1	(575)	7028	2	3363183
2067	19.1	5.2	10.3	chr6	31336985	31337597	(139468382)	C	LTR10E	LTR/ERV1	(42)	591	12	3363185
25	18.9	1.6	1.6	chr6	33893031	33893092	(136912887)	+	G-rich	Low_complexity	1	63	(0)	3367285
213	23.4	0.0	2.1	chr6	35318035	35318082	(135487897)	+	MIRc	SINE/MIR	122	168	(100)	3370117
379	24.5	2.0	1.0	chr6	37304185	37304283	(133501696)	C	L2a	LINE/L2	(3)	3423	3324	3374452
1577	25.0	6.9	2.9	chr6	37304284	37304794	(133501185)	+	L1ME2	LINE/L1	5630	6162	(2)	3374453
16	12.4	6.9	7.8	chr6	39792379	39792450	(131013529)	+	(AGCGCG)n	Simple_repeat	1	77	(0)	3378541
27	15.5	2.0	0.0	chr6	39792669	39792718	(131013261)	+	(TG)n	Simple_repeat	1	51	(0)	3378542
13	13.2	0.0	0.0	chr6	40587342	40587366	(130218613)	+	(TGTG)n	Simple_repeat	1	25	(0)	3379731
16	14.2	0.0	0.0	chr6	40587387	40587417	(130218562)	+	(CACACA)n	Simple_repeat	1	31	(0)	3379732
43	2.5	0.0	0.0	chr6	40587494	40587534	(130218445)	+	(CA)n	Simple_repeat	1	41	(0)	3379733
2115	27.0	10.2	4.2	chr6	41213790	41214628	(129591351)	C	L1MEh	LINE/L1	(429)	1806	927	3380794
2437	14.9	2.9	13.8	chr6	41214650	41215305	(129590674)	C	LTR10A	LTR/ERV1	(21)	612	1	3380796
4582	3.9	0.7	0.0	chr6	42954338	42954909	(127851070)	+	LTR10C	LTR/ERV1	11	586	(5)	3384426
14	20.5	4.4	0.0	chr6	42954910	42954954	(127851025)	+	(TTTTATA)n	Simple_repeat	1	47	(0)	3384427
14	39.3	1.1	1.1	chr6	43171522	43171610	(127634369)	+	(GCG)n	Simple_repeat	1	90	(0)	3384861
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
15	0.0	0.0	0.0	chr6	47478192	47478210	(123327769)	+	(GGA)n	Simple_repeat	1	19	(0)	3391825
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
5303	23.4	2.8	2.3	chr6	56393553	56396366	(114409613)	+	L1PBb	LINE/L1	54	1993	(4942)	3404124
25	0.0	0.0	0.0	chr6	56542429	56542455	(114263524)	+	(A)n	Simple_repeat	1	27	(0)	3404286
30	30.2	2.4	2.3	chr6	68635173	68635298	(102170681)	+	(GC)n	Simple_repeat	1	129	(0)	3416917
39	4.7	0.0	0.0	chr6	73263040	73263084	(97542895)	+	(GGC)n	Simple_repeat	1	45	(0)	3423001
2244	9.7	4.2	0.0	chr6	73460966	73461083	(97344896)	C	AluSc8	SINE/Alu	(193)	118	1	3423494
1966	6.2	0.4	0.8	chr6	73461306	73461534	(97344445)	+	AluY	SINE/Alu	53	282	(29)	3423496
73	0.0	4.0	0.0	chr6	73461535	73461609	(97344370)	+	(AAAT)n	Simple_repeat	1	78	(0)	3423497
2265	9.5	1.0	0.0	chr6	73523145	73523439	(97282540)	+	AluSz	SINE/Alu	1	298	(14)	3423646
2193	16.0	1.9	2.7	chr6	75272290	75272718	(95533261)	+	LTR10E	LTR/ERV1	161	590	(43)	3425971
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
12231	14.6	2.0	1.0	chr6	76375614	76379818	(94426161)	C	L1PA8A	LINE/L1	(2110)	4351	88	3427599
17	12.0	2.6	2.6	chr6	82364685	82364722	(88441257)	+	(GCAGGA)n	Simple_repeat	1	39	(0)	3435072
18	23.3	0.0	0.0	chr6	82365048	82365092	(88440887)	+	(CTC)n	Simple_repeat	1	45	(0)	3435073
20	24.0	2.4	4.6	chr6	85643596	85643680	(85162299)	+	(CCCCG)n	Simple_repeat	1	87	(0)	3439346
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
13	17.6	2.4	4.7	chr6	90296033	90296074	(80509905)	+	G-rich	Low_complexity	1	43	(0)	3446169
12	7.3	10.3	0.0	chr6	90296251	90296279	(80509700)	+	(TCGGC)n	Simple_repeat	1	32	(0)	3446170
2658	3.9	0.0	1.0	chr6	99515771	99516075	(71289904)	C	AluYm1	SINE/Alu	(8)	303	2	3457765
13	11.2	4.5	6.5	chr6	99520982	99521025	(71284954)	+	(GCCGGAG)n	Simple_repeat	1	46	(0)	3457774
17	13.2	0.0	2.9	chr6	99521007	99521041	(71284938)	+	GA-rich	Low_complexity	1	35	(0)	3457775
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
200	25.4	3.5	0.0	chr6	109383253	109383307	(61422672)	C	MIR3	SINE/MIR	(55)	153	97	3472068
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
2007	15.4	1.0	1.0	chr6	111401829	111402139	(59403840)	+	AluJb	SINE/Alu	1	311	(1)	3475530
320	35.7	5.8	5.0	chr6	111402298	111402518	(59403461)	C	L1MEd	LINE/L1	(6707)	379	157	3475531
262	33.0	5.3	3.6	chr6	111402526	111402635	(59403344)	C	L1MEd	LINE/L1	(5972)	253	142	3475531
20	25.2	2.1	5.3	chr6	111482653	111482745	(59323234)	+	(GCCGGC)n	Simple_repeat	1	95	(0)	3475664
19	23.4	0.0	0.0	chr6	111482928	111482977	(59323002)	+	(CGGCAG)n	Simple_repeat	1	50	(0)	3475665
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
1313	19.5	4.4	6.1	chr6	118574044	118574503	(52231476)	+	LTR10B2	LTR/ERV1	91	533	(14)	3485357
1916	24.3	6.3	4.8	chr6	118574512	118575515	(52230464)	+	HERVIP10B3-int	LTR/ERV1	10	1020	(6765)	3485357
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
18	7.0	0.0	3.1	chr6	121334481	121334521	(49471458)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	3488811
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
28	2.7	0.0	6.8	chr6	135181329	135181372	(35624607)	+	(TCC)n	Simple_repeat	1	44	(0)	3508088
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
12	18.1	0.0	3.0	chr6	142353235	142353267	(28452712)	+	(TTTAT)n	Simple_repeat	1	33	(0)	3518400
14	8.5	0.0	3.7	chr6	142946113	142946139	(27859840)	+	(GAGG)n	Simple_repeat	1	27	(0)	3519179
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
1870	20.7	3.7	7.6	chr6	143579736	143580185	(27225794)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	129	3520115
11	14.1	0.0	8.1	chr6	144007925	144007961	(26798018)	+	(GGACCC)n	Simple_repeat	1	37	(0)	3520695
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
12	21.6	0.0	0.0	chr6	146543341	146543372	(24262607)	+	(GGCCCC)n	Simple_repeat	1	32	(0)	3524168
15	20.7	0.0	7.0	chr6	146543641	146543697	(24262282)	+	(CCGGC)n	Simple_repeat	1	57	(0)	3524169
11	26.6	5.6	2.7	chr6	150599796	150599812	(20206167)	+	G-rich	Low_complexity	1	29	(46)	3530476
15	14.9	0.0	0.0	chr6	150599813	150599842	(20206137)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3530477
11	26.6	5.6	2.7	chr6	150599843	150599866	(20206113)	+	G-rich	Low_complexity	30	75	(0)	3530476
29	3.2	0.0	0.0	chr6	150599879	150599910	(20206069)	+	(GAGCCC)n	Simple_repeat	1	32	(0)	3530478
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
17	12.4	2.9	0.0	chr6	151390334	151390368	(19415611)	+	(TCCCCG)n	Simple_repeat	1	36	(0)	3531907
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
18	6.8	0.0	5.7	chr6	151390752	151390786	(19415193)	+	(CCCTC)n	Simple_repeat	1	35	(0)	3531911
15	20.1	0.0	0.0	chr6	151390815	151390866	(19415113)	+	(GCA)n	Simple_repeat	1	52	(0)	3531912
23	25.1	2.6	1.3	chr6	151391001	151391077	(19414902)	+	(CCTC)n	Simple_repeat	1	79	(0)	3531913
622	13.5	2.6	3.5	chr6	151764107	151764221	(19041758)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	3532589
1539	20.9	4.6	7.0	chr6	152221855	152222323	(18583656)	+	LTR10B1	LTR/ERV1	1	547	(0)	3533210
550	21.1	1.6	3.1	chr6	153059876	153060002	(17745977)	+	MER5A1	DNA/hAT-Charlie	1	125	(41)	3534391
276	30.5	7.5	6.7	chr6	153060386	153060574	(17745405)	+	L2b	LINE/L2	3127	3341	(46)	3534392
18	30.4	0.0	2.9	chr6	153131242	153131310	(17674669)	+	GA-rich	Low_complexity	1	69	(0)	3534483
19	8.3	0.0	0.0	chr6	154510937	154510962	(16295017)	+	(A)n	Simple_repeat	1	26	(0)	3536517
13	18.2	3.5	6.8	chr6	154733522	154733578	(16072401)	+	G-rich	Low_complexity	1	59	(0)	3536959
12	32.1	2.8	1.4	chr6	157021871	157021941	(13784038)	+	(CGTCCCG)n	Simple_repeat	1	73	(0)	3540328
20	3.8	0.0	0.0	chr6	157381083	157381109	(13424870)	+	(GAG)n	Simple_repeat	1	27	(0)	3540819
19	17.9	0.0	4.2	chr6	157981785	157981832	(12824147)	+	GA-rich	Low_complexity	1	48	(0)	3541773
2595	4.6	1.0	0.3	chr6	158733816	158734119	(12071860)	+	AluY	SINE/Alu	1	306	(5)	3543038
3851	11.6	3.5	3.6	chr6	158734120	158734232	(12071747)	+	LTR10E	LTR/ERV1	520	633	(0)	3543036
222	22.7	12.0	8.3	chr6	158734309	158734380	(12071599)	+	L2c	LINE/L2	3278	3352	(35)	3543039
414	25.2	31.0	2.1	chr6	158734426	158734812	(12071167)	+	L2a	LINE/L2	2910	3423	(3)	3543040
13	15.7	0.0	7.3	chr6	158818816	158818856	(11987123)	+	G-rich	Low_complexity	1	41	(0)	3543167
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
17	8.1	3.9	0.0	chr6	163965944	163965969	(6840010)	+	(CA)n	Simple_repeat	1	27	(0)	3550162
2419	10.1	0.0	0.0	chr6	164822847	164823152	(5982827)	+	AluSx	SINE/Alu	2	307	(5)	3551218
5698	11.4	0.4	1.7	chr6	164823153	164823400	(5982579)	+	L1MA2	LINE/L1	7477	7723	(0)	3551216
15	20.1	3.6	3.5	chr6	166999124	166999178	(3806801)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3553893
4728	5.8	1.0	1.2	chr6	168366105	168366696	(2439283)	+	LTR10C	LTR/ERV1	1	591	(0)	3555425
11	18.7	4.3	4.2	chr6	169724154	169724199	(1081780)	+	G-rich	Low_complexity	1	48	(0)	3556770
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
2261	9.7	1.7	0.7	chr7	4300202	4300523	(155045450)	C	AluSq2	SINE/Alu	(0)	313	1	3564534
302	26.8	4.0	3.0	chr7	4300658	4300757	(155045216)	+	MER63A	DNA/hAT-Blackjack	6	106	(104)	3564535
2386	6.8	0.0	0.0	chr7	4300769	4301089	(155044884)	C	AluYf1	SINE/Alu	(0)	311	1	3564536
2296	8.1	1.9	2.3	chr7	5189692	5190001	(154155972)	C	AluSx	SINE/Alu	(3)	309	1	3566483
13	26.3	1.2	8.1	chr7	5190335	5190419	(154155554)	+	(GGCCC)n	Simple_repeat	1	86	(0)	3566484
19	21.8	1.8	1.8	chr7	5190498	5190553	(154155420)	+	(GGTCGG)n	Simple_repeat	1	57	(0)	3566485
15	16.1	1.7	8.5	chr7	5190856	5190913	(154155060)	+	(TCCTC)n	Simple_repeat	1	59	(0)	3566486
233	22.5	8.5	6.6	chr7	6348316	6348418	(152997555)	+	MIRc	SINE/MIR	57	169	(99)	3569141
13	7.6	8.5	5.9	chr7	6348517	6348563	(152997410)	+	G-rich	Low_complexity	1	51	(0)	3569142
12	18.4	5.4	0.0	chr7	6348780	6348816	(152997157)	+	(GCCGC)n	Simple_repeat	1	39	(0)	3569143
2409	7.6	0.0	0.3	chr7	6373948	6374249	(152971724)	C	AluSq2	SINE/Alu	(7)	306	6	3569227
17	27.8	2.4	3.5	chr7	6374414	6374496	(152971477)	+	G-rich	Low_complexity	1	85	(0)	3569228
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
13	24.3	5.7	0.0	chr7	7183194	7183246	(152162727)	+	(CCCGC)n	Simple_repeat	1	56	(0)	3570761
13	13.1	0.0	0.0	chr7	7567205	7567229	(151778744)	+	(GCCG)n	Simple_repeat	1	25	(0)	3571261
28	12.4	0.0	0.0	chr7	11831828	11831880	(147514093)	+	(AGC)n	Simple_repeat	1	53	(0)	3576680
14	15.4	5.6	0.0	chr7	12686828	12686863	(146659110)	+	(GGCG)n	Simple_repeat	1	38	(0)	3577694
4411	19.1	4.7	3.9	chr7	13109208	13110437	(146235536)	C	MER52A	LTR/ERV1	(0)	1755	1	3578312
276	17.8	22.3	1.0	chr7	23105386	23105487	(136240486)	C	L2a	LINE/L2	(0)	3426	3297	3591730
18	0.0	0.0	0.0	chr7	23105519	23105538	(136240435)	+	(A)n	Simple_repeat	1	20	(0)	3591731
15	21.2	0.0	0.0	chr7	27113640	27113677	(132232296)	+	(GCTCAG)n	Simple_repeat	1	38	(0)	3598031
25	22.3	0.0	0.0	chr7	27113856	27113907	(132232066)	+	(C)n	Simple_repeat	1	52	(0)	3598032
36	0.0	0.0	0.0	chr7	27140002	27140032	(132205941)	+	(AG)n	Simple_repeat	1	31	(0)	3598050
20	27.1	0.0	0.0	chr7	28854656	28854705	(130491268)	+	(AC)n	Simple_repeat	1	50	(0)	3600671
19	22.5	2.4	6.0	chr7	29989645	29989726	(129356247)	+	G-rich	Low_complexity	1	84	(0)	3602440
12	12.7	8.5	3.9	chr7	30284482	30284528	(129061445)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	3602921
12	32.3	2.4	3.6	chr7	30284934	30285015	(129060958)	+	(GGC)n	Simple_repeat	1	84	(0)	3602922
19	26.7	3.1	0.0	chr7	30285537	30285600	(129060373)	+	(CGC)n	Simple_repeat	1	66	(0)	3602923
14	10.4	3.0	2.9	chr7	32891346	32891378	(126454595)	+	(GCGCCC)n	Simple_repeat	1	34	(0)	3606929
43	25.8	1.5	6.8	chr7	32891819	32892022	(126453951)	+	(CCGC)n	Simple_repeat	1	207	(0)	3606930
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
17	22.8	3.1	3.0	chr7	35254198	35254262	(124091711)	+	G-rich	Low_complexity	1	67	(0)	3610384
1149	14.8	0.0	0.0	chr7	36389365	36389526	(122956447)	C	AluJb	SINE/Alu	(14)	298	137	3612221
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
208	33.0	4.9	0.0	chr7	38178407	38178503	(121167470)	C	MIRc	SINE/MIR	(82)	186	85	3614740
13	7.5	7.1	0.0	chr7	38909068	38909095	(120436878)	+	(CTCCA)n	Simple_repeat	1	30	(0)	3615797
710	25.1	14.3	0.0	chr7	38909424	38909626	(120436347)	C	MIRb	SINE/MIR	(10)	258	22	3615798
633	23.9	8.0	2.1	chr7	40133995	40134226	(119211747)	+	MIRb	SINE/MIR	8	268	(0)	3617869
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
12	29.2	0.0	3.7	chr7	42911707	42911760	(116434213)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3621832
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
4611	25.2	4.6	3.0	chr7	43419548	43419711	(115926262)	+	L1M5	LINE/L1	3826	3989	(2157)	3622598
5192	4.8	0.3	0.0	chr7	43419712	43420300	(115925673)	C	LTR10C	LTR/ERV1	(0)	591	1	3622599
4587	7.0	0.5	1.0	chr7	51147297	51147742	(108198231)	C	LTR10C	LTR/ERV1	(0)	591	144	3633255
2323	8.8	0.0	3.8	chr7	51147743	51148061	(108197912)	C	AluY	SINE/Alu	(4)	307	1	3633256
2770	17.3	3.6	4.9	chr7	52183970	52184583	(107161390)	+	LTR10E	LTR/ERV1	1	609	(0)	3634571
839	18.2	2.7	6.2	chr7	52184584	52184774	(107161199)	C	MER34B	LTR/ERV1	(381)	184	1	3634570
5739	10.9	1.1	1.0	chr7	54933085	54933175	(104412798)	+	L1MA3	LINE/L1	7464	7557	(167)	3637987
12	27.4	1.8	3.5	chr7	54933238	54933293	(104412680)	+	G-rich	Low_complexity	1	57	(0)	3637989
12	12.8	5.6	2.6	chr7	54933402	54933437	(104412536)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	3637990
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
347	18.2	0.0	0.0	chr7	57495188	57495242	(101850731)	+	AluYj4	SINE/Alu	225	279	(32)	3642545
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
4709	6.9	0.0	0.3	chr7	67075814	67076406	(92269567)	+	LTR10C	LTR/ERV1	1	591	(0)	3651466
1878	20.4	3.2	2.7	chr7	67076407	67076480	(92269493)	+	L1MB8	LINE/L1	6079	6151	(27)	3651465
2203	11.9	0.0	0.0	chr7	67076481	67076775	(92269198)	C	AluSz6	SINE/Alu	(17)	295	1	3651467
3166	15.1	1.1	4.7	chr7	68265729	68266304	(91079669)	+	LTR10A	LTR/ERV1	1	555	(54)	3654126
259	19.4	14.3	4.0	chr7	70693622	70693696	(88652277)	C	MIRb	SINE/MIR	(18)	250	167	3658700
25	18.1	1.1	7.9	chr7	70693944	70694031	(88651942)	+	G-rich	Low_complexity	1	89	(0)	3658701
15	17.6	7.5	1.8	chr7	70694296	70694348	(88651625)	+	(CGC)n	Simple_repeat	1	57	(0)	3658702
18	6.6	0.0	7.9	chr7	70694494	70694531	(88651442)	+	(CCT)n	Simple_repeat	1	38	(0)	3658703
2191	11.9	0.7	0.0	chr7	72735588	72735882	(86610091)	+	AluSz6	SINE/Alu	1	297	(15)	3662957
1787	20.8	0.7	2.7	chr7	72735883	72735956	(86610017)	C	L1MB8	LINE/L1	(27)	6151	6083	3662958
4574	6.6	0.5	0.3	chr7	72735957	72736546	(86609427)	C	LTR10C	LTR/ERV1	(0)	591	1	3662959
1787	20.8	0.7	2.7	chr7	72736547	72736921	(86609052)	C	L1MB8	LINE/L1	(96)	6082	5711	3662958
11	21.8	4.4	2.1	chr7	73006168	73006212	(86339761)	+	(GCTCGC)n	Simple_repeat	1	47	(0)	3663556
368	30.4	1.7	0.9	chr7	74994348	74994463	(84351510)	+	MIRb	SINE/MIR	77	193	(75)	3668549
22	13.8	0.0	0.0	chr7	82443816	82443855	(76902118)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	3680896
1034	22.9	6.1	3.4	chr7	84760991	84761350	(74584623)	+	LTR10C	LTR/ERV1	141	577	(56)	3683936
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
203	22.2	15.9	3.2	chr7	92179326	92179418	(67166555)	C	MER5B	DNA/hAT-Charlie	(13)	165	59	3693494
16	31.2	0.0	0.0	chr7	92246063	92246121	(67099852)	+	(GGCGGT)n	Simple_repeat	1	59	(0)	3693578
13	24.4	4.2	0.0	chr7	92246093	92246140	(67099833)	+	G-rich	Low_complexity	1	50	(0)	3693579
2190	8.9	1.1	0.7	chr7	92590620	92590931	(66755042)	C	AluSx1	SINE/Alu	(0)	312	1	3694135
13	20.4	0.0	2.8	chr7	94509776	94509811	(64836162)	+	GA-rich	Low_complexity	1	36	(0)	3696750
12	22.4	0.0	2.6	chr7	98617086	98617123	(60728850)	+	(CTCACG)n	Simple_repeat	1	38	(0)	3702996
236	22.1	2.9	2.9	chr7	98687777	98687846	(60658127)	+	MIR3	SINE/MIR	92	161	(47)	3703156
2095	13.2	3.9	6.2	chr7	99611888	99612258	(59733715)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	3705092
12	25.9	1.9	3.6	chr7	100272046	100272099	(59073874)	+	G-rich	Low_complexity	1	55	(0)	3706205
15	9.1	0.0	0.0	chr7	100272316	100272339	(59073634)	+	(TGC)n	Simple_repeat	1	24	(0)	3706206
16	17.9	5.8	1.8	chr7	101165508	101165559	(58180414)	+	(GGCTC)n	Simple_repeat	1	55	(0)	3708140
27	0.0	0.0	0.0	chr7	101165787	101165812	(58180161)	+	(AATG)n	Simple_repeat	1	26	(0)	3708141
19	26.8	0.0	1.7	chr7	101165840	101165899	(58180074)	+	(ATGA)n	Simple_repeat	1	60	(0)	3708142
36	2.7	0.0	0.0	chr7	101743688	101743725	(57602248)	+	(CCT)n	Simple_repeat	1	38	(0)	3709558
238	27.5	1.2	10.1	chr7	101743967	101744055	(57601918)	C	L2c	LINE/L2	(14)	3373	3293	3709559
23	14.7	0.0	0.0	chr7	102572730	102572767	(56773206)	+	(C)n	Simple_repeat	1	38	(0)	3711320
29	10.0	5.7	4.0	chr7	105876591	105876663	(53469310)	+	G-rich	Low_complexity	1	74	(0)	3716733
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
2756	7.5	15.7	0.7	chr7	106569510	106569937	(52776036)	+	LTR10F	LTR/ERV1	1	504	(7)	3717761
19	19.4	3.4	3.3	chr7	107044605	107044665	(52301308)	+	G-rich	Low_complexity	1	61	(0)	3718509
12	11.1	6.9	0.0	chr7	107044751	107044779	(52301194)	+	G-rich	Low_complexity	1	31	(0)	3718510
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
2847	13.2	2.4	6.2	chr7	111942397	111942963	(47403010)	+	LTR10A	LTR/ERV1	1	545	(64)	3725073
19	15.6	2.2	2.2	chr7	112939728	112939797	(46406176)	+	(CGC)n	Simple_repeat	1	70	(0)	3726480
15	30.3	0.0	1.7	chr7	112939807	112939864	(46406109)	+	GA-rich	Low_complexity	1	58	(0)	3726481
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
11519	21.6	2.5	3.6	chr7	121507931	121510966	(37835007)	C	HERVIP10B3-int	LTR/ERV1	(2051)	5552	26	3737792
1338	19.7	6.6	4.9	chr7	121510992	121511453	(37834520)	C	LTR10B2	LTR/ERV1	(0)	547	1	3737792
13	21.5	7.3	2.7	chr7	121873738	121873805	(37472168)	+	(CGCGCCC)n	Simple_repeat	1	73	(0)	3738332
27	0.0	0.0	3.3	chr7	128361727	128361756	(30984217)	+	(CCT)n	Simple_repeat	1	30	(0)	3747076
16	15.0	0.0	4.9	chr7	129780249	129780289	(29565684)	+	(CGCCCCG)n	Simple_repeat	1	41	(0)	3749820
243	32.6	15.9	0.0	chr7	132957130	132957261	(26388712)	+	MIR3	SINE/MIR	31	187	(21)	3755168
2683	15.3	1.3	6.5	chr7	134895743	134896328	(24449645)	+	LTR10A	LTR/ERV1	1	555	(54)	3758197
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
32	0.0	0.0	0.0	chr7	138981540	138981569	(20364404)	+	(GCCT)n	Simple_repeat	1	30	(0)	3764672
216	29.3	0.0	0.0	chr7	139109883	139109940	(20236033)	C	MIRb	SINE/MIR	(79)	189	132	3764943
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
1618	25.3	4.7	3.1	chr7	143177616	143177815	(16168158)	+	L1MEd	LINE/L1	4788	4992	(1154)	3771509
4377	10.1	1.3	0.9	chr7	143177816	143178446	(16167527)	C	LTR10E	LTR/ERV1	(0)	633	1	3771512
18	24.7	1.5	4.3	chr7	148699038	148699105	(10646868)	+	(CGG)n	Simple_repeat	1	69	(0)	3779245
28	31.0	0.0	0.0	chr7	148941873	148941948	(10404025)	+	(TA)n	Simple_repeat	1	76	(0)	3779657
588	11.8	0.0	0.0	chr7	148941968	148942043	(10403930)	C	AluSc	SINE/Alu	(30)	279	204	3779658
808	10.6	0.0	6.8	chr7	148942044	148942175	(10403798)	+	FLAM_C	SINE/Alu	13	135	(8)	3779659
26	2.6	4.9	2.3	chr7	149091051	149091091	(10254882)	+	(CAGGGA)n	Simple_repeat	1	43	(0)	3780003
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
699	1.5	8.8	0.2	chr7	150909709	150910669	(8435304)	+	(GT)n	Simple_repeat	1	1046	(0)	3782638
638	30.4	13.8	1.2	chr7	150910670	150910928	(8435045)	C	L2a	LINE/L2	(161)	3265	2964	3782637
39	35.5	0.6	1.2	chr7	150910959	150911118	(8434855)	+	(AC)n	Simple_repeat	1	161	(0)	3782639
16	31.1	0.0	0.0	chr7	151167483	151167541	(8178432)	+	(GCCCCC)n	Simple_repeat	1	59	(0)	3782990
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
1691	22.2	6.6	2.5	chr7	151992301	151992747	(7353226)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3784384
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
23	12.4	3.5	5.0	chr7	152025935	152025992	(7319981)	+	(GCG)n	Simple_repeat	1	60	(0)	3784463
1503	19.1	12.3	0.3	chr7	152088950	152089300	(7256673)	C	LTR8B	LTR/ERV1	(0)	820	422	3784537
3772	9.4	5.3	2.0	chr7	152089298	152089894	(7256079)	C	LTR10E	LTR/ERV1	(15)	618	1	3784538
13	24.6	2.3	0.0	chr7	152436347	152436389	(6909584)	+	(GCTC)n	Simple_repeat	1	44	(0)	3785121
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
2836	15.7	6.3	1.7	chr7	152704525	152705087	(6640886)	+	LTR10A	LTR/ERV1	1	627	(6)	3785804
603	9.6	0.0	0.0	chr7	152733288	152733370	(6612603)	+	AluSx	SINE/Alu	2	84	(228)	3785876
3155	14.1	2.8	6.4	chr7	152733373	152733982	(6611991)	C	LTR10E	LTR/ERV1	(21)	612	22	3785877
16	26.6	1.7	1.6	chr7	155297434	155297493	(4048480)	+	G-rich	Low_complexity	1	61	(0)	3789476
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
2135	6.2	2.9	1.1	chr7	156949219	156949490	(2396483)	C	AluSx	SINE/Alu	(35)	277	1	3791613
2521	8.4	0.7	0.0	chr7	157298180	157298489	(2047484)	+	AluSx1	SINE/Alu	1	312	(0)	3792223
946	25.5	13.5	4.7	chr7	157298490	157298759	(2047214)	+	MLT1C	LTR/ERVL-MaLR	184	467	(0)	3792222
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1950	12.0	16.2	1.5	chr7	158966765	158967289	(378684)	+	LTR10E	LTR/ERV1	1	602	(31)	3793958
361	25.5	2.4	5.8	chr7	158967309	158967479	(378494)	C	L1MEg	LINE/L1	(4839)	1361	1197	3793957
3741	14.8	3.3	5.2	chr7	158967480	158968041	(377932)	C	MER4D1	LTR/ERV1	(37)	863	327	3793959
32	22.7	0.0	6.8	chr8	688255	688371	(144450265)	+	(CCCCG)n	Simple_repeat	1	117	(0)	3795081
9198	25.8	5.2	6.8	chr8	8359471	8362615	(136776021)	C	HERVI-int	LTR/ERV1	(4692)	3093	1	3804586
2213	19.8	4.2	10.4	chr8	8362617	8363270	(136775366)	C	LTR10E	LTR/ERV1	(21)	612	1	3804586
18	18.9	4.2	0.0	chr8	9933877	9933924	(135204712)	+	(GCCTC)n	Simple_repeat	1	50	(0)	3807297
208	37.1	5.3	3.3	chr8	9933976	9934159	(135204477)	+	MIRc	SINE/MIR	19	206	(62)	3807298
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
13	25.3	2.0	2.0	chr8	11808347	11808395	(133330241)	+	G-rich	Low_complexity	1	50	(0)	3810190
43	2.3	0.0	0.0	chr8	11808705	11808748	(133329888)	+	(CCCACT)n	Simple_repeat	1	44	(0)	3810191
12	14.8	4.9	4.7	chr8	12659533	12659573	(132479063)	+	(CCGCG)n	Simple_repeat	1	43	(0)	3811383
25	23.1	3.3	3.2	chr8	26513914	26514004	(118624632)	+	(CCCTC)n	Simple_repeat	1	94	(0)	3832884
11	17.2	7.7	0.0	chr8	30727772	30727810	(114410826)	+	(CGCGCGC)n	Simple_repeat	1	42	(0)	3840308
890	16.1	1.2	2.4	chr8	30728259	30728426	(114410210)	C	FRAM	SINE/Alu	(10)	166	1	3840309
25	7.7	0.0	4.4	chr8	30728429	30728473	(114410163)	+	(ATTT)n	Simple_repeat	1	45	(0)	3840310
660	17.9	0.0	0.0	chr8	30728475	30728580	(114410056)	C	AluJr	SINE/Alu	(179)	133	28	3840311
267	30.1	2.8	0.0	chr8	37360024	37360126	(107778510)	+	MIR3	SINE/MIR	48	153	(55)	3850196
14	16.6	8.5	0.0	chr8	38468108	38468154	(106670482)	+	(GCTCGGC)n	Simple_repeat	1	51	(0)	3852336
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
16	7.0	10.0	0.0	chr8	38787121	38787156	(106351480)	+	(GC)n	Simple_repeat	1	39	(0)	3852978
25	18.1	1.3	5.2	chr8	38787224	38787299	(106351337)	+	G-rich	Low_complexity	1	77	(0)	3852979
2167	14.4	1.8	2.7	chr8	52546467	52546895	(92591741)	+	LTR10E	LTR/ERV1	161	590	(43)	3868293
277	19.2	0.0	0.0	chr8	52546902	52546953	(92591683)	+	MER58D	DNA/hAT-Charlie	335	386	(0)	3868294
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1612	17.1	2.1	4.7	chr8	60529981	60530134	(84608502)	C	AluJb	SINE/Alu	(22)	290	135	3879324
2041	14.8	1.0	1.3	chr8	60530135	60530444	(84608192)	C	AluSx	SINE/Alu	(2)	310	2	3879325
1612	17.1	2.1	4.7	chr8	60530445	60530587	(84608049)	C	AluJb	SINE/Alu	(178)	134	1	3879324
354	21.6	2.0	4.0	chr8	60530643	60530743	(84607893)	C	L1MEd	LINE/L1	(4914)	2189	2091	3879322
13	20.9	3.8	3.6	chr8	60714067	60714119	(84424517)	+	(GCTGG)n	Simple_repeat	1	55	(0)	3879633
22	4.0	0.0	0.0	chr8	60714407	60714432	(84424204)	+	(C)n	Simple_repeat	1	26	(0)	3879634
15	3.1	8.1	5.0	chr8	60714433	60714442	(84424194)	+	(GCCCC)n	Simple_repeat	2	40	(0)	3879635
13	15.2	0.0	3.2	chr8	61714631	61714661	(83423975)	+	(GCCCC)n	Simple_repeat	1	31	(0)	3881000
13	29.6	1.5	3.0	chr8	63038959	63039023	(82099613)	+	(GCCCGC)n	Simple_repeat	1	66	(0)	3882621
17	18.6	0.0	0.0	chr8	63038992	63039028	(82099608)	+	(CCCCGA)n	Simple_repeat	1	37	(0)	3882622
13	11.3	10.5	0.0	chr8	66613012	66613049	(78525587)	+	(GACCGC)n	Simple_repeat	1	42	(0)	3887699
17	23.1	1.7	3.3	chr8	66613144	66613202	(78525434)	+	(CCCGGC)n	Simple_repeat	1	60	(0)	3887700
14	24.0	5.8	2.7	chr8	66613395	66613463	(78525173)	+	G-rich	Low_complexity	1	73	(0)	3887701
5641	20.6	5.4	6.8	chr8	70748175	70749781	(74388855)	+	MER52D	LTR/ERV1	510	2091	(32)	3894319
21	18.8	0.0	0.0	chr8	72537121	72537163	(72601473)	+	GA-rich	Low_complexity	1	43	(0)	3896585
11	18.2	2.4	4.8	chr8	73294579	73294619	(71844017)	+	(AGCGCGG)n	Simple_repeat	1	42	(0)	3897759
16	19.8	1.7	6.6	chr8	73294989	73295048	(71843588)	+	(GCCG)n	Simple_repeat	1	61	(0)	3897760
12	20.2	0.0	6.7	chr8	78665979	78666023	(66472613)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	3904970
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
1486	20.6	4.9	0.7	chr8	80241127	80241417	(64897219)	C	AluJr	SINE/Alu	(8)	304	1	3907312
35	0.0	0.0	0.0	chr8	85463770	85463802	(59674834)	+	(GGAGCCCC)n	Simple_repeat	1	33	(0)	3914608
14	15.9	7.1	0.0	chr8	85463829	85463870	(59674766)	+	(CCCCG)n	Simple_repeat	1	45	(0)	3914609
298	29.0	3.1	1.6	chr8	85659943	85660068	(59478568)	C	L1ME4b	LINE/L1	(0)	892	765	3914925
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
237	27.6	9.5	6.3	chr8	86163726	86163868	(58974768)	C	MLT1K	LTR/ERVL-MaLR	(27)	568	421	3915619
18	21.2	0.0	0.0	chr8	90082709	90082746	(55055890)	+	(GT)n	Simple_repeat	1	38	(0)	3920710
35	5.0	0.0	0.0	chr8	90985245	90985286	(54153350)	+	(GGCGGGG)n	Simple_repeat	1	42	(0)	3921892
17	21.4	3.9	5.0	chr8	92103352	92103428	(53035208)	+	(GCGCCGC)n	Simple_repeat	1	80	(0)	3923414
12	9.8	0.0	0.0	chr8	92103580	92103601	(53035035)	+	(GGGC)n	Simple_repeat	1	22	(0)	3923415
243	33.9	0.0	0.0	chr8	93890420	93890484	(51248152)	C	LTR81A	LTR/Gypsy	(569)	781	717	3926005
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
2625	10.8	3.6	1.4	chr8	94748885	94749240	(50389396)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3927496
1720	8.7	1.6	4.4	chr8	94749241	94749305	(50389331)	+	MER1B	DNA/hAT-Charlie	272	339	(0)	3927494
1165	22.2	7.0	3.6	chr8	94749316	94749714	(50388922)	C	LTR10E	LTR/ERV1	(43)	590	96	3927497
14	19.1	0.0	6.4	chr8	97644083	97644129	(47494507)	+	(GCCCC)n	Simple_repeat	1	47	(0)	3932076
14	16.9	3.0	0.0	chr8	97644686	97644718	(47493918)	+	(GCT)n	Simple_repeat	1	34	(0)	3932077
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
22	27.2	1.0	5.7	chr8	101205283	101205386	(43933250)	+	(CCCGCCC)n	Simple_repeat	1	105	(0)	3938341
12	21.7	1.6	7.9	chr8	101205648	101205709	(43932927)	+	(CGCCT)n	Simple_repeat	1	63	(0)	3938342
278	35.2	1.1	2.1	chr8	103621087	103621123	(41517513)	+	L2b	LINE/L2	3259	3295	(80)	3942571
4948	3.9	0.3	0.0	chr8	103621124	103621712	(41516924)	C	LTR10C	LTR/ERV1	(0)	591	1	3942572
11	12.8	8.8	0.0	chr8	104223406	104223439	(40915197)	+	(CCGCCT)n	Simple_repeat	1	37	(0)	3943387
20	28.3	3.6	1.2	chr8	106270272	106270354	(38868282)	+	(CGC)n	Simple_repeat	1	86	(0)	3946268
13	27.0	3.8	0.0	chr8	106270443	106270495	(38868141)	+	(GCGCCTG)n	Simple_repeat	1	55	(0)	3946269
202	29.6	12.1	2.6	chr8	120124051	120124206	(25014430)	C	OldhAT1	DNA/hAT-Ac	(2362)	486	314	3966124
2823	15.0	3.3	7.9	chr8	122232097	122232694	(22905942)	+	LTR10A	LTR/ERV1	1	543	(66)	3969558
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
14	18.4	4.4	2.1	chr8	133297284	133297328	(11841308)	+	(GCGCCCC)n	Simple_repeat	1	47	(0)	3990150
12	19.4	4.7	2.2	chr8	133297384	133297426	(11841210)	+	G-rich	Low_complexity	1	45	(0)	3990151
17	17.6	4.4	0.0	chr8	133297583	133297627	(11841009)	+	(GTGTGC)n	Simple_repeat	1	47	(0)	3990152
18	13.5	2.2	4.3	chr8	133571802	133571846	(11566790)	+	(CCT)n	Simple_repeat	1	46	(0)	3990738
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
15	31.1	0.0	1.6	chr8	142727285	142727345	(2411291)	+	(CGCCGC)n	Simple_repeat	1	61	(0)	4005232
2612	14.3	5.8	2.9	chr8	142973058	142973545	(2165091)	+	LTR10G	LTR/ERV1	1	503	(20)	4005522
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1032	11.2	2.7	4.3	chr8	144088279	144088400	(1050236)	C	AluSx	SINE/Alu	(9)	303	182	4007082
4192	9.2	5.5	0.5	chr8	144088401	144089001	(1049635)	C	LTR10E	LTR/ERV1	(0)	633	1	4007083
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
258	32.3	15.3	1.2	chr8	144686723	144686885	(451751)	+	L2	LINE/L2	1151	1340	(2079)	4007919
15	8.1	0.0	3.6	chr9	4298042	4298069	(134096648)	+	(GCGA)n	Simple_repeat	1	28	(0)	4014804
13	20.8	0.0	0.0	chr9	16870803	16870835	(121523882)	+	(CCGC)n	Simple_repeat	1	33	(0)	4032494
14	15.4	6.7	2.1	chr9	19230372	19230416	(119164301)	+	(CCTC)n	Simple_repeat	1	48	(0)	4035923
16	15.8	2.2	4.3	chr9	19408910	19408955	(118985762)	+	(AGGCG)n	Simple_repeat	1	47	(0)	4036276
16	21.5	0.0	2.2	chr9	19789097	19789141	(118605576)	+	(CTGTGCG)n	Simple_repeat	1	45	(0)	4036889
49	0.0	0.0	0.0	chr9	20620253	20620294	(117774423)	+	(AC)n	Simple_repeat	1	42	(0)	4038135
18	14.4	0.0	2.5	chr9	20620547	20620586	(117774131)	+	G-rich	Low_complexity	1	40	(0)	4038136
23	20.5	4.4	4.2	chr9	21994457	21994547	(116400170)	+	(CCGCAC)n	Simple_repeat	1	95	(0)	4039969
7251	21.2	1.3	1.0	chr9	22216507	22217927	(116176790)	+	L1M1	LINE/L1	9	1434	(6131)	4040288
2472	5.3	1.6	0.3	chr9	33076868	33077171	(105317546)	+	AluSp	SINE/Alu	2	309	(4)	4054715
16	28.3	0.0	3.2	chr9	33167352	33167414	(105227303)	+	(GAGGCG)n	Simple_repeat	1	63	(0)	4054861
21	9.5	0.0	0.0	chr9	35489590	35489623	(102905094)	+	(CCCAC)n	Simple_repeat	1	34	(0)	4058938
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
260	24.7	3.6	6.9	chr9	37903534	37903620	(100491097)	+	MIR3	SINE/MIR	111	194	(14)	4063616
13	14.7	7.9	0.0	chr9	37904198	37904235	(100490482)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	4063617
297	26.9	8.5	2.5	chr9	39464715	39464912	(98929805)	+	L1MC5a	LINE/L1	2368	2578	(199)	4066127
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
1061	15.1	1.9	0.0	chr9	70392041	70392199	(68002518)	+	AluSz6	SINE/Alu	136	297	(15)	4083059
12	25.8	0.0	0.0	chr9	71446731	71446767	(66947950)	+	(CCGGCT)n	Simple_repeat	1	37	(0)	4084666
12	29.1	4.0	2.6	chr9	71446942	71447015	(66947702)	+	(GCCTCC)n	Simple_repeat	1	77	(0)	4084667
13	21.1	0.0	6.1	chr9	76394000	76394048	(62000669)	+	(CCCCGCT)n	Simple_repeat	1	49	(0)	4092454
18	17.2	0.0	5.9	chr9	76394543	76394593	(62000124)	+	(GCCCC)n	Simple_repeat	1	51	(0)	4092455
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
13	19.5	0.0	2.7	chr9	79572840	79572876	(58821841)	+	G-rich	Low_complexity	1	37	(0)	4097448
862	28.9	6.3	7.1	chr9	79856922	79857626	(58537091)	C	L2a	LINE/L2	(0)	3426	2735	4097846
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
19	15.3	0.0	0.0	chr9	83987047	83987083	(54407634)	+	(CCTTC)n	Simple_repeat	1	37	(0)	4103862
1956	11.5	3.9	0.0	chr9	83987084	83987352	(54407365)	C	AluSx	SINE/Alu	(32)	280	1	4103863
526	20.9	11.5	0.7	chr9	86094121	86094260	(52300457)	+	MER58A	DNA/hAT-Charlie	1	157	(67)	4107291
18	18.9	1.1	10.1	chr9	86099514	86099601	(52295116)	+	(GCGCCCA)n	Simple_repeat	1	89	(0)	4107302
3276	9.1	4.4	3.4	chr9	88419071	88419569	(49975148)	+	LTR10F	LTR/ERV1	1	504	(7)	4111144
237	29.6	2.7	0.0	chr9	93095351	93095421	(45299296)	+	MIRc	SINE/MIR	77	149	(119)	4117709
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
3902	10.3	4.6	4.6	chr9	95519055	95519686	(42875031)	+	LTR10E	LTR/ERV1	1	632	(1)	4121317
259	21.1	0.0	6.6	chr9	96419486	96419546	(41975171)	+	L2c	LINE/L2	3331	3387	(0)	4122834
18	3.3	6.5	0.0	chr9	96654925	96654955	(41739762)	+	(CCTCGC)n	Simple_repeat	1	33	(0)	4123268
23	24.9	1.5	0.0	chr9	96655321	96655386	(41739331)	+	G-rich	Low_complexity	1	67	(0)	4123269
711	27.3	10.2	0.7	chr9	97411417	97411726	(40982991)	C	L2a	LINE/L2	(8)	3418	3076	4124477
32	26.8	1.8	1.8	chr9	97983153	97983272	(40411445)	+	(CGCCG)n	Simple_repeat	1	120	(0)	4125544
12	18.3	0.0	3.0	chr9	100427024	100427056	(37967661)	+	G-rich	Low_complexity	1	33	(0)	4130119
26	20.7	3.0	8.8	chr9	100427145	100427277	(37967440)	+	(CGG)n	Simple_repeat	1	137	(0)	4130120
18	20.9	4.7	3.0	chr9	100427328	100427391	(37967326)	+	(GCC)n	Simple_repeat	1	67	(0)	4130121
21	19.2	1.8	1.8	chr9	100427427	100427481	(37967236)	+	G-rich	Low_complexity	1	56	(0)	4130122
182	20.0	2.0	2.0	chr9	100427744	100427794	(37966923)	C	MIRb	SINE/MIR	(30)	238	188	4130123
235	26.6	5.2	0.9	chr9	101387867	101387976	(37006741)	C	Tigger15a	DNA/TcMar-Tigger	(163)	552	438	4131618
403	20.7	0.0	0.0	chr9	101388114	101388195	(37006522)	+	MER5A1	DNA/hAT-Charlie	53	134	(32)	4131619
230	17.1	0.0	0.0	chr9	101388208	101388248	(37006469)	+	MER5A1	DNA/hAT-Charlie	120	160	(6)	4131620
13	16.8	0.0	0.0	chr9	101449113	101449140	(36945577)	+	(AGGC)n	Simple_repeat	1	28	(0)	4131716
1934	17.4	3.4	4.7	chr9	104256156	104256615	(34138102)	+	LTR10E	LTR/ERV1	161	618	(15)	4135467
1066	24.9	9.0	4.3	chr9	104256592	104257252	(34137465)	+	LTR8B	LTR/ERV1	56	802	(18)	4135466
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
15	22.3	4.4	4.2	chr9	105244915	105244982	(33149735)	+	(CCCG)n	Simple_repeat	1	71	(0)	4137224
2401	8.2	0.3	0.3	chr9	112097396	112097698	(26297019)	C	AluSq2	SINE/Alu	(10)	303	1	4149152
11	19.5	10.0	1.5	chr9	113060165	113060224	(25334493)	+	(GCCAGCTGC)n	Simple_repeat	1	66	(0)	4150941
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
14	24.3	2.0	2.0	chr9	114505506	114505558	(23889159)	+	(CCCGCC)n	Simple_repeat	1	53	(0)	4153794
425	23.1	4.1	5.7	chr9	124126692	124126815	(14267902)	+	L2b	LINE/L2	3253	3374	(1)	4171985
16	0.0	0.0	0.0	chr9	125473079	125473096	(12921621)	+	(T)n	Simple_repeat	1	18	(0)	4174737
2335	10.7	0.0	0.0	chr9	128192531	128192840	(10201877)	C	AluSz	SINE/Alu	(0)	312	3	4179940
2426	7.0	1.0	0.0	chr9	128419868	128420167	(9974550)	C	AluSx1	SINE/Alu	(9)	303	1	4180476
13	27.2	5.6	1.3	chr9	128420767	128420786	(9973931)	+	(GCCCG)n	Simple_repeat	1	54	(22)	4180477
12	12.0	3.7	0.0	chr9	128552423	128552449	(9842268)	+	G-rich	Low_complexity	1	28	(0)	4180817
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
15	10.4	0.0	5.7	chr9	129488448	129488482	(8906235)	+	G-rich	Low_complexity	1	35	(0)	4182951
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
4845	5.4	0.3	0.3	chr9	131005133	131005723	(7388994)	+	LTR10C	LTR/ERV1	1	591	(0)	4186176
772	21.1	5.3	11.0	chr9	131005738	131005817	(7388900)	C	ORSL	DNA/hAT-Tip100	(10)	265	186	4186177
963	13.5	1.5	7.2	chr9	131005818	131005892	(7388825)	+	L1MB3	LINE/L1	5986	6062	(121)	4186178
219	29.3	7.7	0.0	chr9	132241539	132241695	(6153022)	C	L2b	LINE/L2	(271)	3104	2935	4188496
695	27.1	8.6	6.3	chr9	135413036	135413398	(2981319)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	1	4193177
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
2925	22.7	8.2	4.7	chrX	18843505	18844063	(137196832)	+	ERVL-E-int	LTR/ERVL	5	572	(5095)	4390257
4777	4.4	0.3	4.5	chrX	18844064	18844330	(137196565)	C	LTR10C	LTR/ERV1	(1)	590	348	4390258
2349	9.4	0.0	0.3	chrX	18844331	18844629	(137196266)	C	AluSc8	SINE/Alu	(13)	298	1	4390259
13	21.9	0.0	2.6	chrX	19744871	19744909	(136295986)	+	(TTAA)n	Simple_repeat	1	39	(0)	4391876
26	20.7	1.6	0.0	chrX	19887481	19887541	(136153354)	+	(GCT)n	Simple_repeat	1	62	(0)	4392146
45	0.0	0.0	0.0	chrX	19887602	19887650	(136153245)	+	(A)n	Simple_repeat	1	49	(0)	4392147
24	20.2	4.4	0.0	chrX	19887765	19887832	(136153063)	+	G-rich	Low_complexity	1	71	(0)	4392148
3529	17.9	9.1	2.8	chrX	36956449	36957374	(119083521)	+	L1MA9	LINE/L1	5275	6274	(38)	4417009
14	20.2	0.0	0.0	chrX	39688908	39688943	(116351952)	+	(CCCTC)n	Simple_repeat	1	36	(0)	4420983
15	6.6	0.0	10.3	chrX	39689180	39689218	(116351677)	+	(TCCCC)n	Simple_repeat	1	39	(0)	4420984
24	14.6	2.5	5.0	chrX	40106346	40106407	(115934488)	+	G-rich	Low_complexity	1	60	(0)	4421772
33	11.3	1.4	5.3	chrX	40106528	40106601	(115934294)	+	(CCTCCCG)n	Simple_repeat	1	75	(0)	4421773
20	3.7	0.0	0.0	chrX	40912142	40912169	(115128726)	+	(TTTTG)n	Simple_repeat	1	28	(0)	4423283
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
2195	12.8	0.0	0.0	chrX	44572080	44572377	(111468518)	+	AluSg	SINE/Alu	1	298	(12)	4429172
1175	11.5	3.2	2.1	chrX	44572404	44572449	(111468446)	C	MER41A	LTR/ERV1	(0)	554	512	4429173
3964	6.6	1.0	1.7	chrX	44572450	44572976	(111467919)	C	LTR10G	LTR/ERV1	(0)	523	1	4429174
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
2405	5.4	0.3	1.0	chrX	52921577	52921870	(103119025)	C	AluY	SINE/Alu	(19)	292	1	4442715
14674	16.1	4.5	0.8	chrX	57082258	57087473	(98953422)	+	L1PA13	LINE/L1	10	5432	(1334)	4448803
2463	8.5	0.3	0.0	chrX	72714924	72715228	(83325667)	+	AluSx	SINE/Alu	1	306	(6)	4463777
16170	10.2	2.8	1.4	chrX	73892230	73895710	(82145185)	+	L1PA7	LINE/L1	1	3508	(2953)	4464872
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
921	17.1	1.2	0.0	chrX	74178921	74179078	(81861817)	+	HERVK3-int	LTR/ERVK	2330	2489	(4348)	4465236
2171	12.0	0.0	0.7	chrX	76173222	76173522	(79867373)	C	AluJb	SINE/Alu	(13)	299	1	4467323
4517	5.8	0.0	4.2	chrX	84959185	84959801	(71081094)	+	LTR10C	LTR/ERV1	1	591	(0)	4476456
3134	9.5	1.4	1.1	chrX	84959802	84959892	(71081003)	C	L1PA13	LINE/L1	(392)	5771	5681	4476455
33	23.2	1.7	5.0	chrX	107826209	107826325	(48214570)	+	(GCG)n	Simple_repeat	1	119	(0)	4504922
13	19.7	10.3	0.0	chrX	107826688	107826745	(48214150)	+	G-rich	Low_complexity	1	64	(0)	4504923
12396	9.7	0.9	2.8	chrX	112486114	112488409	(43552486)	C	L1PB	LINE/L1	(369)	6498	4244	4511504
4817	5.3	0.8	0.0	chrX	120143043	120143628	(35897267)	+	LTR10C	LTR/ERV1	1	591	(0)	4522520
2188	16.9	7.1	3.3	chrX	120143636	120144308	(35896587)	+	HERVIP10FH-int	LTR/ERV1	4	843	(4259)	4522520
44	2.0	0.0	0.0	chrX	123960603	123960652	(32080243)	+	(A)n	Simple_repeat	1	50	(0)	4527819
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
15	6.7	6.1	2.9	chrX	135521657	135521689	(20519206)	+	GA-rich	Low_complexity	1	35	(0)	4544493
30	26.9	0.9	3.6	chrX	135521835	135521944	(20518951)	+	(CTC)n	Simple_repeat	1	111	(0)	4544494
16	23.4	2.9	4.2	chrX	135985459	135985528	(20055367)	+	G-rich	Low_complexity	1	72	(0)	4545166
13	25.1	0.0	2.3	chrX	149505177	149505220	(6535675)	+	(GCCGCA)n	Simple_repeat	1	44	(0)	4564708
281	34.0	1.0	5.5	chrX	154096199	154096307	(1944588)	+	MamSINE1	SINE/tRNA-RTE	171	274	(16)	4571248
15	21.4	3.0	5.8	chrX	155071159	155071225	(969670)	+	(CCTCCGC)n	Simple_repeat	1	69	(0)	4572850
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
4917	25.0	0.5	0.3	chrY	10945942	10948880	(46278535)	+	(TCCAC)n	Simple_repeat	1	2949	(0)	4588499
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165