3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
2315	8.6	0.7	2.2	chr1	1317108	1317420	(247639002)	+	AluSq	SINE/Alu	1	308	(5)	1584
346	29.2	4.5	0.0	chr1	1317422	1317527	(247638895)	+	L1MEg	LINE/L1	840	950	(5134)	1585
658	26.0	8.2	5.9	chr1	1317739	1317864	(247638558)	+	L1MEg	LINE/L1	1309	1433	(4651)	1585
21	7.7	0.0	0.0	chr1	3320315	3320342	(245636080)	+	(TG)n	Simple_repeat	1	28	(0)	3908
288	30.5	9.7	3.1	chr1	9678671	9678863	(239277559)	C	X7A_LINE	LINE/CR1	(7)	260	54	14150
2563	6.9	0.0	0.0	chr1	9679064	9679367	(239277055)	C	AluSx	SINE/Alu	(8)	304	1	14151
1481	22.6	11.2	2.8	chr1	15221724	15222182	(233734240)	+	MLT1D	LTR/ERVL-MaLR	4	505	(0)	24808
3951	23.8	4.4	6.3	chr1	17039634	17040476	(231915946)	C	L1MEf	LINE/L1	(4284)	1958	1128	28548
1729	17.8	0.4	3.5	chr1	17040477	17040763	(231915659)	C	AluJr4	SINE/Alu	(34)	278	1	28550
3951	23.8	4.4	6.3	chr1	17040764	17040847	(231915575)	C	L1MEf	LINE/L1	(5115)	1127	1048	28548
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
430	27.5	11.9	1.1	chr1	22025945	22026124	(226930298)	+	MIRb	SINE/MIR	58	259	(9)	39249
890	19.2	15.3	0.0	chr1	25942786	25942978	(223013444)	+	AluJb	SINE/Alu	1	228	(84)	48167
3125	9.4	0.5	2.0	chr1	25942981	25943434	(223012988)	+	Harlequin-int	LTR/ERV1	5264	5710	(1186)	48168
530	18.1	0.0	0.0	chr1	28072257	28072361	(220884061)	+	L1MD3	LINE/L1	7731	7835	(160)	53179
2355	9.0	0.3	0.0	chr1	31561199	31561488	(217394934)	+	AluSx1	SINE/Alu	1	291	(21)	60908
2447	28.9	5.2	5.0	chr1	31561489	31562050	(217394372)	C	L1MEd	LINE/L1	(5804)	1299	725	60901
12	27.6	0.0	0.0	chr1	35192280	35192318	(213764104)	+	(TGG)n	Simple_repeat	1	39	(0)	68202
1856	19.6	1.4	0.0	chr1	35222940	35223292	(213733130)	C	Arthur1C	DNA/hAT-Tip100	(2)	361	4	68294
2746	26.4	7.0	5.6	chr1	36502887	36504448	(212451974)	C	L1MEd	LINE/L1	(3847)	2299	711	71012
20	27.3	0.0	1.6	chr1	38859494	38859557	(210096865)	+	(GCCTCC)n	Simple_repeat	1	64	(0)	75454
1654	15.0	7.3	5.3	chr1	39274340	39274662	(209681760)	+	MER2	DNA/TcMar-Tigger	1	330	(15)	76449
858	23.5	3.1	1.0	chr1	39274688	39274908	(209681514)	+	MIR	SINE/MIR	5	230	(0)	76450
3280	25.5	8.5	5.0	chr1	41077046	41079407	(207877015)	+	L1MEg	LINE/L1	9	3567	(3983)	80150
3441	26.6	7.9	7.2	chr1	42266288	42268755	(206687667)	+	L1MCc	LINE/L1	23	2729	(4308)	82196
2490	4.4	0.7	1.0	chr1	45550071	45550368	(203406054)	+	AluSg7	SINE/Alu	1	297	(12)	88277
319	31.6	0.0	0.0	chr1	45550371	45550449	(203405973)	+	MIRb	SINE/MIR	158	236	(32)	88275
213	32.5	2.4	1.2	chr1	45550560	45550640	(203405782)	+	MIR3	SINE/MIR	110	191	(17)	88278
2624	22.4	7.4	6.8	chr1	45821200	45821508	(203134914)	C	L1M4	LINE/L1	(5585)	1932	1601	88854
2242	12.0	0.7	0.0	chr1	45821509	45821816	(203134606)	C	AluSx4	SINE/Alu	(0)	310	1	88856
19	21.8	1.9	0.0	chr1	47314604	47314656	(201641766)	+	(TTTTTAA)n	Simple_repeat	1	54	(0)	91314
1052	9.9	1.3	13.5	chr1	51724584	51724771	(197231651)	C	L1MCa	LINE/L1	(4954)	1554	1380	99329
3916	15.8	6.8	1.0	chr1	51724917	51725688	(197230734)	C	L1MCa	LINE/L1	(5122)	1386	567	99329
270	26.0	7.1	2.6	chr1	51769061	51769169	(197187253)	+	Charlie8	DNA/hAT-Charlie	2355	2428	(0)	99406
434	31.5	3.4	1.4	chr1	52662745	52662889	(196293533)	C	L2b	LINE/L2	(23)	3352	3205	101391
361	27.2	7.5	1.8	chr1	52663205	52663370	(196293052)	C	MIR1_Amn	SINE/MIR	(51)	179	1	101392
238	29.9	2.0	3.0	chr1	54311419	54311518	(194644904)	+	MIRc	SINE/MIR	139	237	(31)	104841
2564	8.0	0.0	1.0	chr1	56565420	56565720	(192390702)	C	AluSx1	SINE/Alu	(14)	298	1	109091
7026	10.7	1.1	6.3	chr1	56595634	56597078	(192359344)	C	L1PA7	LINE/L1	(5)	6149	4832	109161
1148	17.7	5.0	0.4	chr1	56703573	56703799	(192252623)	C	Charlie1a	DNA/hAT-Charlie	(706)	749	512	109359
391	24.0	1.0	2.0	chr1	56703805	56703907	(192252515)	C	MIRc	SINE/MIR	(110)	120	25	109360
3580	26.9	7.3	7.1	chr1	59621293	59622950	(189333472)	C	L1MEf	LINE/L1	(4491)	1709	56	115172
531	31.6	16.7	2.3	chr1	59879037	59879379	(189077043)	C	L2c	LINE/L2	(9)	3378	2977	115577
1150	10.1	1.5	13.5	chr1	59879488	59879717	(189076705)	C	MER30	DNA/hAT-Charlie	(0)	230	29	115578
13774	7.7	1.5	2.7	chr1	62468380	62470547	(186485875)	+	L1PB1	LINE/L1	3958	6102	(49)	120304
2348	8.7	0.0	0.3	chr1	62782889	62783177	(186173245)	C	AluSz	SINE/Alu	(24)	288	1	120813
2392	9.9	0.3	0.6	chr1	62783234	62783545	(186172877)	C	AluSx1	SINE/Alu	(0)	312	2	120814
19	0.0	0.0	0.0	chr1	62783687	62783707	(186172715)	+	(T)n	Simple_repeat	1	21	(0)	120815
548	27.7	7.8	1.8	chr1	63548100	63548332	(185408090)	C	L2a	LINE/L2	(274)	3101	2859	122242
563	18.6	4.1	6.9	chr1	63548377	63548602	(185407820)	C	L1MCc	LINE/L1	(4901)	2136	1979	122244
816	21.1	4.1	2.3	chr1	63548594	63548811	(185407611)	C	L1MCc	LINE/L1	(6150)	273	52	122244
388	23.2	4.8	2.0	chr1	63548823	63548923	(185407499)	C	L2a	LINE/L2	(564)	2855	2752	122242
2309	22.2	6.2	6.6	chr1	64561876	64562365	(184394057)	C	L1MEf	LINE/L1	(4706)	1536	1060	124108
21	18.1	0.0	8.2	chr1	64966524	64966596	(183989826)	+	(CCGCC)n	Simple_repeat	1	73	(0)	124796
337	23.4	5.7	6.1	chr1	67307491	67307642	(181648780)	C	MIR	SINE/MIR	(61)	207	54	128594
18	24.1	2.5	4.9	chr1	67307720	67307736	(181648686)	+	(CCGCC)n	Simple_repeat	1	81	(0)	128595
14	20.2	4.8	4.6	chr1	67307737	67307798	(181648624)	+	(CCCAGC)n	Simple_repeat	1	65	(0)	128596
18	15.4	7.4	5.8	chr1	67307809	67307889	(181648533)	+	(GCGCGGA)n	Simple_repeat	1	87	(0)	128597
224	24.2	4.3	3.9	chr1	68342467	68342572	(180613850)	C	MIRc	SINE/MIR	(7)	201	95	130514
200	29.7	17.9	0.0	chr1	68343064	68343127	(180613295)	C	MIR3	SINE/MIR	(86)	122	45	130514
27	27.3	2.6	3.3	chr1	76074604	76074720	(172881702)	+	G-rich	Low_complexity	1	120	(0)	140897
229	26.6	5.9	0.0	chr1	77753855	77753918	(171202504)	+	MIR	SINE/MIR	193	260	(2)	143425
190	30.2	15.9	4.5	chr1	77753875	77754096	(171202326)	+	L3	LINE/CR1	3654	3905	(194)	143422
412	23.1	19.9	1.7	chr1	81611247	81611430	(167344992)	+	MIRc	SINE/MIR	23	244	(24)	148696
799	30.9	10.8	11.6	chr1	83854493	83855658	(165100764)	+	L2a	LINE/L2	1924	3079	(340)	151738
8650	12.5	4.6	9.9	chr1	86110386	86112054	(162844368)	+	LTR12C	LTR/ERV1	3	1579	(0)	155168
10822	11.8	2.0	0.4	chr1	86376886	86378486	(162577936)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	155517
2482	20.2	5.8	4.7	chr1	86933161	86934645	(162021777)	C	L1MCb	LINE/L1	(5123)	1628	331	156357
317	27.7	16.5	2.8	chr1	88051308	88051593	(160904829)	C	L1ME4a	LINE/L1	(0)	6124	5792	157968
282	24.6	0.0	0.0	chr1	88051596	88051656	(160904766)	C	L1ME3Cz	LINE/L1	(506)	491	431	157969
1257	24.8	10.2	0.2	chr1	88051624	88052110	(160904312)	C	L1MEh	LINE/L1	(737)	1671	1168	157970
4337	9.8	4.5	3.4	chr1	88974601	88975285	(159981137)	+	LTR12	LTR/ERV1	1	693	(133)	159307
1343	9.1	0.0	0.0	chr1	88975286	88975450	(159980972)	C	AluSc8	SINE/Alu	(146)	165	1	159308
2163	16.3	10.8	1.7	chr1	89723145	89723562	(159232860)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	1	160237
15	19.6	0.0	0.0	chr1	93269462	93269490	(155686932)	+	A-rich	Low_complexity	1	29	(0)	166014
14	13.7	3.1	0.0	chr1	93269789	93269820	(155686602)	+	A-rich	Low_complexity	1	33	(0)	166015
5496	9.2	1.1	1.3	chr1	93413067	93413848	(155542574)	C	MER4E1	LTR/ERV1	(0)	781	1	166255
1041	16.9	0.0	4.9	chr1	93413849	93413873	(155542549)	C	AluJb	SINE/Alu	(154)	158	134	166254
910	13.0	0.8	0.0	chr1	93413875	93414005	(155542417)	C	AluJo	SINE/Alu	(179)	133	2	166256
428	15.0	0.0	1.2	chr1	93414007	93414087	(155542335)	C	ERV24_Prim-int	LTR/ERV1	(4954)	2621	2542	166253
6145	14.6	0.6	1.3	chr1	93414089	93415129	(155541293)	C	ERV24_Prim-int	LTR/ERV1	(5404)	2171	1139	166253
840	27.2	3.3	6.5	chr1	100137498	100137748	(148818674)	C	LTR40a	LTR/ERVL	(267)	252	1	176020
528	33.4	9.6	1.9	chr1	110180836	110181255	(138775167)	C	MamGypsy2-I	LTR/Gypsy	(946)	3220	2769	189695
1696	14.7	3.4	8.3	chr1	113803821	113804132	(135152290)	+	AluJr4	SINE/Alu	1	296	(16)	195545
616	30.1	3.8	8.8	chr1	113804133	113804228	(135152194)	+	MIRb	SINE/MIR	159	241	(27)	195544
479	27.6	17.3	0.0	chr1	113991745	113991940	(134964482)	+	MIRc	SINE/MIR	32	268	(0)	195896
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
241	25.2	1.8	7.5	chr1	157194858	157194977	(91761445)	+	MER52D	LTR/ERV1	365	477	(1646)	231411
2440	6.2	0.0	1.3	chr1	161764874	161765180	(87191242)	C	AluSx3	SINE/Alu	(8)	303	1	238071
183	22.6	8.6	0.0	chr1	162632591	162632643	(86323779)	C	X9_LINE	LINE/L1	(61)	875	818	239513
16	16.6	0.0	0.0	chr1	162632648	162632674	(86323748)	+	(T)n	Simple_repeat	1	27	(0)	239514
66	1.7	0.0	0.0	chr1	170689815	170689875	(78266547)	+	(TC)n	Simple_repeat	1	61	(0)	251640
27	6.0	0.0	0.0	chr1	170689876	170689910	(78266512)	+	(GT)n	Simple_repeat	1	35	(0)	251641
5174	8.9	0.6	2.4	chr1	173376472	173377172	(75579250)	+	LTR12_	LTR/ERV1	1	688	(0)	255503
9645	16.7	4.1	5.2	chr1	173377173	173380422	(75576000)	+	HERV9-int	LTR/ERV1	1	3478	(3613)	255503
12035	14.6	1.8	3.4	chr1	173462483	173464250	(75492172)	+	L1PA11	LINE/L1	3157	4942	(2667)	255642
250	31.4	12.8	3.3	chr1	173562787	173562997	(75393425)	C	L2a	LINE/L2	(0)	3426	3193	255770
53	0.0	0.0	0.0	chr1	175029654	175029698	(73926724)	+	(CA)n	Simple_repeat	1	45	(0)	258117
1644	16.1	1.5	6.4	chr1	175112340	175112598	(73843824)	C	L1PB3	LINE/L1	(3706)	3458	3211	258229
1988	14.0	0.3	1.8	chr1	175112599	175112921	(73843501)	C	AluSz	SINE/Alu	(0)	312	1	258235
4163	20.1	5.5	5.7	chr1	179660489	179661490	(69294932)	C	L1ME1	LINE/L1	(4248)	1994	978	265130
50	4.0	0.0	0.0	chr1	190478703	190478754	(58477668)	+	(TC)n	Simple_repeat	1	52	(0)	280953
5825	10.1	1.2	0.6	chr1	196596102	196596586	(52359836)	C	L1PB2	LINE/L1	(364)	5787	5298	288857
1649	17.3	5.4	0.3	chr1	196596716	196596998	(52359424)	C	AluJb	SINE/Alu	(14)	298	1	288859
181	17.5	4.8	0.0	chr1	200408824	200408863	(48547559)	C	OldhAT1	DNA/hAT-Ac	(462)	2386	2345	294188
11	16.9	2.9	2.8	chr1	200409131	200409165	(48547257)	+	(TGGTGC)n	Simple_repeat	1	36	(0)	294189
348	29.0	7.8	10.1	chr1	206030984	206031221	(42925201)	+	MIRb	SINE/MIR	28	259	(9)	304455
1272	6.8	0.0	0.0	chr1	210052227	210052374	(38904048)	C	AluYc	SINE/Alu	(18)	281	134	310547
2324	10.5	0.3	0.0	chr1	210052381	210052684	(38903738)	+	AluSq	SINE/Alu	1	305	(8)	310548
18313	7.8	4.0	3.1	chr1	212092548	212093116	(36863306)	C	L1PB1	LINE/L1	(281)	6586	6005	313891
5371	10.0	3.0	4.5	chr1	212093117	212093966	(36862456)	C	LTR1A2	LTR/ERV1	(0)	837	1	313893
2048	18.8	4.2	2.4	chr1	212196250	212196669	(36759753)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	314088
617	24.4	0.0	0.0	chr1	212196679	212196813	(36759609)	C	MER8	DNA/TcMar-Tigger	(42)	197	63	314089
362	15.8	1.7	0.0	chr1	212196847	212196903	(36759519)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(995)	73	16	314090
2247	8.5	0.3	0.3	chr1	212196904	212197214	(36759208)	C	AluSp	SINE/Alu	(0)	313	2	314091
55	0.0	0.0	0.0	chr1	212502814	212502860	(36453562)	+	(TG)n	Simple_repeat	1	47	(0)	314633
391	20.2	14.0	4.8	chr1	212503072	212503258	(36453164)	+	MLT1J1	LTR/ERVL-MaLR	101	307	(137)	314634
16	18.7	7.0	0.0	chr1	214551802	214551844	(34404578)	+	(GC)n	Simple_repeat	1	46	(0)	317877
6617	12.2	4.6	1.7	chr1	218506922	218508026	(30448396)	+	THE1C-int	LTR/ERVL-MaLR	1	1138	(442)	323374
849	28.5	8.4	2.1	chr1	220949599	220950132	(28006290)	+	L1MEg	LINE/L1	659	1229	(5013)	326949
350	22.1	4.4	0.0	chr1	220950132	220950217	(28006205)	+	L1MB4	LINE/L1	6051	6140	(40)	326950
2804	22.9	4.7	5.2	chr1	220950222	220950374	(28006048)	+	L1MEg	LINE/L1	1210	1350	(4892)	326949
2189	11.1	0.3	3.5	chr1	220950375	220950690	(28005732)	+	AluSz	SINE/Alu	1	306	(6)	326951
2804	24.1	4.5	4.1	chr1	220950691	220951856	(28004566)	+	L1MEg	LINE/L1	1351	2536	(3610)	326949
20007	13.2	2.2	1.6	chr1	223235196	223241664	(25714758)	C	L1MC1	LINE/L1	(9)	6499	1	330428
5860	6.6	1.7	0.4	chr1	223422285	223423040	(25533382)	C	MER4E	LTR/ERV1	(0)	766	1	330663
2521	22.3	4.7	6.6	chr1	223423041	223423588	(25532834)	+	L1MC4	LINE/L1	7337	7871	(11)	330662
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
1029	22.9	5.6	2.6	chr1	227280328	227280640	(21675782)	C	Charlie2b	DNA/hAT-Charlie	(2458)	324	2	337212
7587	8.9	5.6	3.9	chr1	227679712	227681200	(21275222)	+	Harlequin-int	LTR/ERV1	1	1422	(5474)	337778
1158	22.8	1.9	4.6	chr1	228244879	228245315	(20711107)	C	L1MEg	LINE/L1	(4567)	1517	1093	338492
1144	25.7	0.9	3.9	chr1	228245994	228246431	(20709991)	C	L1MEg	LINE/L1	(4567)	1517	1093	338494
826	7.2	8.3	0.0	chr1	228555793	228555903	(20400519)	+	5S	rRNA	1	121	(0)	338873
2308	8.2	0.0	2.5	chr1	228555908	228556226	(20400196)	C	AluY	SINE/Alu	(0)	311	1	338874
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
2087	6.7	10.6	0.0	chr1	231357061	231357329	(17599093)	+	AluSc	SINE/Alu	2	302	(7)	343360
762	27.3	5.7	1.8	chr1	232950980	232951251	(16005171)	C	Charlie4a	DNA/hAT-Charlie	(188)	320	38	345699
4880	26.7	6.6	4.2	chr1	234437555	234439543	(14516879)	+	L1MEf	LINE/L1	44	2082	(4160)	347865
3148	8.8	5.5	0.2	chr1	234504613	234505058	(14451364)	C	MER4A1	LTR/ERV1	(0)	472	2	347983
256	28.1	7.3	5.0	chr1	234505081	234505200	(14451222)	+	MIR3	SINE/MIR	20	142	(66)	347984
2047	20.0	3.9	1.6	chr1	234505222	234505673	(14450749)	+	MLT1C	LTR/ERVL-MaLR	5	467	(0)	347985
325	30.4	6.5	10.5	chr1	234505694	234505884	(14450538)	+	MIRb	SINE/MIR	26	208	(60)	347986
559	29.3	1.9	4.7	chr1	234781964	234782178	(14174244)	+	MamRep1879	DNA/hAT-Tip100?	8	216	(0)	348428
885	23.4	1.4	1.9	chr1	234782180	234782388	(14174034)	+	MIRb	SINE/MIR	55	262	(6)	348429
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
4533	9.0	0.2	1.8	chr1	236322226	236322658	(12633764)	C	LTR66	LTR/ERVL	(186)	424	1	351386
5038	20.3	9.2	11.4	chr1	236322659	236322899	(12633523)	+	L1M4c	LINE/L1	1614	1849	(4900)	351384
1959	14.1	0.3	3.4	chr1	236322900	236323197	(12633225)	+	AluJr	SINE/Alu	1	289	(23)	351388
2165	13.1	4.3	0.8	chr1	236778926	236779287	(12177135)	C	THE1D	LTR/ERVL-MaLR	(6)	375	1	352232
3746	20.7	5.1	3.9	chr1	236779288	236779709	(12176713)	+	L1M4	LINE/L1	1514	1935	(5582)	352230
2466	16.7	1.5	4.6	chr1	239946277	239946758	(9009664)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	356900
758	19.8	3.7	0.0	chr1	241847630	241847786	(7108636)	C	MER67A	LTR/ERV1	(0)	543	381	359940
2255	22.6	3.2	1.6	chr1	243638783	243639398	(5317024)	+	L1M5	LINE/L1	3036	3661	(2485)	362857
2974	16.4	1.1	2.8	chr1	243639399	243639931	(5316491)	+	MER41B	LTR/ERV1	113	596	(38)	362858
4076	17.0	9.6	3.6	chr1	244400763	244401467	(4554955)	C	L1M4c	LINE/L1	(4653)	2096	1318	364147
631	23.1	12.2	5.6	chr10	7951227	7951690	(125845732)	C	MLT1H2	LTR/ERVL-MaLR	(16)	473	12	381888
204	28.2	2.7	5.3	chr10	11824931	11825005	(121972417)	C	L2b	LINE/L2	(0)	3375	3303	387593
1898	31.7	14.2	4.2	chr10	15705210	15706472	(118090950)	+	L2a	LINE/L2	1360	2792	(627)	394687
511	27.2	13.3	2.6	chr10	16220428	16221069	(117576353)	C	L1ME3C	LINE/L1	(1549)	4597	3877	395404
641	25.0	9.3	5.1	chr10	16221074	16221423	(117575999)	C	L1MEg	LINE/L1	(5796)	1290	925	395410
7748	19.2	5.1	7.5	chr10	21934834	21936034	(111861388)	+	L1M4	LINE/L1	937	2195	(5425)	404547
244	11.8	0.0	0.0	chr10	24740643	24740676	(109056746)	+	Alu	SINE/Alu	1	34	(99)	409004
408	26.3	10.2	1.7	chr10	24740675	24740790	(109056632)	C	MamRep137	DNA/TcMar?	(37)	473	347	409005
314	32.1	5.8	2.0	chr10	24740868	24741067	(109056355)	C	MamRep137	DNA/TcMar?	(297)	213	6	409005
2183	13.2	0.0	0.0	chr10	24741371	24741672	(109055750)	C	AluSq2	SINE/Alu	(11)	302	1	409006
2499	10.8	2.2	0.0	chr10	26024323	26024728	(107772694)	C	L1PA14	LINE/L1	(3845)	2828	2416	411046
1197	24.9	2.5	6.6	chr10	27914750	27915218	(105882204)	+	L1M4a1	LINE/L1	1221	1669	(910)	414174
1907	19.1	0.9	0.3	chr10	27915229	27915570	(105881852)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	21	414175
3019	24.0	6.7	1.8	chr10	42532257	42533535	(91263887)	+	L1M4c	LINE/L1	728	2138	(5482)	432181
1934	25.1	6.9	2.2	chr10	44404538	44405403	(89392019)	C	L1MCa	LINE/L1	(4260)	2762	1792	434812
6883	7.4	0.0	1.1	chr10	44405397	44405861	(89391561)	C	L1PA7	LINE/L1	(0)	6154	5690	434818
7929	24.6	5.5	3.3	chr10	46167789	46170921	(87626501)	C	L1MB4	LINE/L1	(2621)	4126	713	437289
5710	21.6	7.3	4.4	chr10	51924125	51925770	(81871652)	C	L1MC2	LINE/L1	(4721)	2030	287	445601
11315	20.9	3.5	2.1	chr10	52005419	52010471	(81786951)	+	L1PA14	LINE/L1	810	5940	(752)	445706
9623	17.9	9.9	7.6	chr10	60711405	60712054	(73085368)	+	L1MCa	LINE/L1	1277	1993	(4571)	457464
2075	19.8	5.5	0.2	chr10	60845025	60845459	(72951963)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	1	457710
288	28.9	2.6	7.3	chr10	62698940	62699062	(71098360)	C	Charlie15b	DNA/hAT-Charlie	(692)	369	253	460489
1824	25.2	3.3	5.4	chr10	62699138	62699880	(71097542)	+	L1MEg	LINE/L1	1160	2158	(421)	460490
1996	25.0	6.8	8.4	chr10	69272432	69273015	(64524407)	C	L1MEg	LINE/L1	(4602)	2948	2383	471245
2272	10.1	0.3	4.6	chr10	69273016	69273204	(64524218)	C	AluSx1	SINE/Alu	(0)	312	137	471246
2305	20.6	12.4	5.4	chr10	70198377	70198561	(63598861)	+	L1MD2	LINE/L1	1141	1451	(5051)	472952
2116	13.6	0.3	0.0	chr10	70198562	70198856	(63598566)	+	AluSx	SINE/Alu	2	297	(15)	472954
767	20.5	12.2	5.5	chr10	70198857	70198948	(63598474)	+	L1MD2	LINE/L1	1452	1537	(4965)	472952
481	22.4	2.8	8.8	chr10	72049021	72049206	(61748216)	+	MLT1C	LTR/ERVL-MaLR	1	200	(305)	476435
2181	14.7	0.0	0.3	chr10	72049207	72049518	(61747904)	+	AluJr4	SINE/Alu	2	312	(0)	476436
263	26.1	4.2	12.0	chr10	72049519	72049560	(61747862)	+	MLT1C	LTR/ERVL-MaLR	185	226	(164)	476435
13	12.6	0.0	3.6	chr10	72049563	72049590	(61747832)	+	GA-rich	Low_complexity	1	28	(0)	476437
1129	24.5	2.5	0.4	chr10	72049592	72049865	(61747557)	+	MLT1C	LTR/ERVL-MaLR	186	465	(2)	476435
290	21.7	19.1	0.0	chr10	72049888	72049993	(61747429)	C	L3	LINE/CR1	(76)	4023	3893	476438
2073	13.1	2.9	0.3	chr10	73317020	73317317	(60480105)	C	AluSx	SINE/Alu	(6)	306	1	479065
3495	19.2	8.2	6.7	chr10	73317318	73317682	(60479740)	C	L1ME1	LINE/L1	(744)	1912	1504	479062
283	18.5	0.0	0.0	chr10	73317707	73317760	(60479662)	+	MSTB	LTR/ERVL-MaLR	1	54	(372)	479066
1116	16.9	4.7	1.3	chr10	73317819	73318046	(60479376)	+	MSTB	LTR/ERVL-MaLR	41	276	(150)	479066
240	27.9	10.1	8.0	chr10	75287823	75287997	(58509425)	C	MLT1O	LTR/ERVL-MaLR	(334)	208	30	482830
26	16.5	1.9	0.0	chr10	80067503	80067556	(53729866)	+	(TTAT)n	Simple_repeat	1	55	(0)	490577
419	9.8	0.0	0.0	chr10	80067557	80067633	(53729789)	+	MER4B-int	LTR/ERV1	1550	1605	(5153)	490578
5195	7.3	7.2	0.4	chr10	80067647	80068357	(53729065)	+	MER4E1	LTR/ERV1	19	781	(0)	490578
303	33.9	2.6	0.9	chr10	90872259	90872371	(42925051)	C	MIR3	SINE/MIR	(46)	162	48	506458
3173	19.6	5.6	2.0	chr10	92641348	92642401	(41155021)	C	L1MDa	LINE/L1	(4634)	1999	888	509580
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
1923	16.9	0.3	0.3	chr10	110976317	110976606	(22820816)	C	AluJb	SINE/Alu	(17)	295	6	540440
644	27.7	2.9	6.7	chr10	110976607	110976757	(22820665)	C	L1MEc	LINE/L1	(4711)	1949	1810	540436
1925	27.9	9.0	3.8	chr10	110976757	110977259	(22820163)	C	L1MEc	LINE/L1	(5013)	1632	1076	540436
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
4399	23.8	6.1	2.3	chr10	132212753	132215024	(1582398)	+	L1MCa	LINE/L1	7	2562	(4098)	571421
2399	16.1	2.6	0.2	chr10	132561243	132561722	(1235700)	C	L1M4	LINE/L1	(1031)	5115	4624	571775
47	0.0	0.0	0.0	chr10	132561723	132561762	(1235660)	+	(CA)n	Simple_repeat	1	40	(0)	571778
263	25.4	10.6	5.6	chr10	132561977	132562101	(1235321)	C	MLT1N2	LTR/ERVL-MaLR	(2)	560	429	571779
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
2400	5.8	0.3	0.3	chr11	518188	518481	(134568141)	C	AluY	SINE/Alu	(17)	294	1	573498
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
5537	7.4	1.5	5.6	chr11	6387294	6387501	(128699121)	C	MER4E1	LTR/ERV1	(573)	208	1	581244
2397	11.1	4.8	6.9	chr11	6387502	6387668	(128698954)	+	LTR23	LTR/ERV1	266	437	(0)	581243
262	26.2	0.0	1.5	chr11	6387704	6387769	(128698853)	C	MER34A	LTR/ERV1	(467)	104	40	581248
825	18.9	4.2	3.0	chr11	8536638	8536796	(126549826)	C	L1MDa	LINE/L1	(5266)	1367	1238	584096
1710	15.8	2.8	5.8	chr11	8536797	8536972	(126549650)	C	AluJr4	SINE/Alu	(30)	282	112	584097
2227	10.1	0.4	0.0	chr11	8536973	8537278	(126549344)	C	AluSx1	SINE/Alu	(0)	312	2	584098
22143	9.4	2.4	1.2	chr11	10466278	10469757	(124616865)	+	L1PA7	LINE/L1	542	4050	(2411)	587600
2219	12.0	0.3	1.9	chr11	11866880	11867196	(123219426)	C	AluSx	SINE/Alu	(0)	312	1	589878
1206	23.7	17.3	2.1	chr11	11867197	11867541	(123219081)	C	L1MB3	LINE/L1	(5742)	1361	944	589876
1204	24.8	9.4	2.0	chr11	13677785	13678244	(121408378)	C	Charlie20a	DNA/hAT-Charlie	(153)	654	157	592662
2142	9.6	3.8	0.0	chr11	20008085	20008365	(115078257)	+	AluSx	SINE/Alu	1	292	(20)	603205
19	24.2	1.5	2.9	chr11	33016057	33016123	(102070499)	+	(GGCGTGC)n	Simple_repeat	1	68	(0)	622659
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
7099	19.2	9.6	3.5	chr11	61153727	61154822	(73931800)	+	L1MEc	LINE/L1	291	1454	(4946)	659590
2148	13.2	0.3	0.0	chr11	61154823	61155118	(73931504)	+	AluJo	SINE/Alu	1	297	(15)	659591
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
1527	24.9	7.1	10.3	chr11	61435182	61435593	(73651029)	C	L1M3c	LINE/L1	(4817)	2120	1700	660147
327	26.7	1.1	2.2	chr11	61435734	61435822	(73650800)	C	L1M3c	LINE/L1	(5226)	1701	1626	660147
2450	7.1	0.3	0.0	chr11	61435841	61436135	(73650487)	+	AluSp	SINE/Alu	1	296	(17)	660160
2297	17.9	5.6	3.6	chr11	62843429	62843921	(72242701)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	662926
2239	11.3	0.0	0.0	chr11	69692009	69692300	(65394322)	+	AluSc	SINE/Alu	2	293	(16)	675513
3234	24.1	5.4	7.0	chr11	69692301	69692989	(65393633)	+	L1MDa	LINE/L1	1343	2010	(4623)	675510
580	30.8	9.1	8.1	chr11	73623107	73623576	(61463046)	+	MLT1L	LTR/ERVL-MaLR	136	610	(0)	682264
12585	15.2	5.3	1.6	chr11	86379999	86381787	(48704835)	C	L1MC1	LINE/L1	(4682)	1826	3	705460
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
2984	0.6	0.0	0.0	chr11	104617856	104618166	(30468456)	+	AluYa5	SINE/Alu	1	311	(0)	731127
463	29.6	2.7	3.2	chr11	104618391	104618575	(30468047)	+	UCON48	Unknown	72	255	(9)	731128
360	23.7	13.9	2.9	chr11	108768867	108769109	(26317513)	C	L1MEi	LINE/L1	(625)	1587	1314	737373
1097	24.7	11.9	3.4	chr11	108769123	108769737	(26316885)	C	L1MEd	LINE/L1	(5810)	1276	603	737372
4391	16.9	3.0	0.6	chr11	108947849	108948563	(26138059)	+	MER44C	DNA/TcMar-Tigger	1	733	(0)	737630
1389	25.8	11.9	1.5	chr11	108948564	108948675	(26137947)	+	L2a	LINE/L2	2875	3008	(411)	737627
18	25.1	2.6	3.9	chr11	117316039	117316114	(17770508)	+	(GGCGG)n	Simple_repeat	1	78	(0)	750938
291	33.7	2.8	10.9	chr11	117316474	117316752	(17769870)	C	L2b	LINE/L2	(26)	3349	3062	750939
2151	9.4	0.4	0.4	chr11	117453733	117454008	(17632614)	C	AluSg7	SINE/Alu	(0)	309	34	751185
4615	24.0	8.4	10.9	chr11	117454009	117454164	(17632458)	C	L1MEg	LINE/L1	(4927)	1315	1147	751183
772	23.4	1.9	0.0	chr11	117454165	117454318	(17632304)	+	MER5A1	DNA/hAT-Charlie	1	157	(9)	751186
4615	24.0	8.4	10.9	chr11	117454319	117455222	(17631400)	C	L1MEg	LINE/L1	(4927)	1146	160	751183
1060	20.2	5.5	9.6	chr11	129359647	129359990	(5726632)	C	L1MEg	LINE/L1	(4692)	1392	1064	770222
5260	21.1	10.0	1.1	chr11	130679028	130679580	(4407042)	+	L1MB4	LINE/L1	937	1499	(4885)	772268
2226	14.0	1.9	2.5	chr11	130679581	130679946	(4406676)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	772269
4355	21.6	5.0	3.1	chr11	134131282	134132555	(954067)	+	L1M4c	LINE/L1	944	2239	(4510)	776850
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
1407	24.7	4.1	4.9	chr12	745798	746047	(132529262)	C	L1ME1	LINE/L1	(4193)	2894	2656	779383
941	14.7	0.0	0.0	chr12	746078	746206	(132529103)	C	FLAM_C	SINE/Alu	(13)	130	2	779389
18	21.8	0.0	0.0	chr12	746299	746335	(132528974)	+	(T)n	Simple_repeat	1	37	(0)	779390
4974	20.2	5.1	5.8	chr12	822393	823636	(132451673)	C	L1MB5	LINE/L1	(5009)	2508	1278	779534
1618	23.5	9.7	10.6	chr12	1675840	1676421	(131598888)	C	L1MEd	LINE/L1	(5431)	1672	1105	781061
2454	9.9	0.3	0.0	chr12	1676422	1676715	(131598594)	C	AluSz	SINE/Alu	(17)	295	1	781070
3927	8.6	1.6	3.1	chr12	10359819	10360432	(122914877)	C	MER4E1	LTR/ERV1	(176)	605	1	795145
2418	9.7	0.0	0.0	chr12	15802843	15803140	(117472169)	+	AluY	SINE/Alu	1	298	(13)	803318
187	29.0	6.1	2.1	chr12	15803221	15803315	(117471994)	C	L2a	LINE/L2	(379)	3047	2949	803319
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1892	17.4	0.3	0.7	chr12	29683846	29684143	(103591166)	C	AluSz	SINE/Alu	(15)	297	1	822700
2324	11.6	0.0	0.3	chr12	32056004	32056313	(101218996)	+	AluSx3	SINE/Alu	1	309	(2)	826709
248	26.8	2.0	7.6	chr12	32056323	32056398	(101218911)	+	LTR85c	LTR/Gypsy?	111	183	(640)	826710
5783	8.2	0.3	3.2	chr12	32056399	32056881	(101218428)	+	MER4E1	LTR/ERV1	1	480	(301)	826711
26	0.0	0.0	0.0	chr12	32399402	32399426	(100875883)	+	(GGC)n	Simple_repeat	1	25	(0)	827410
1264	28.5	5.2	7.2	chr12	46046044	46046572	(87228737)	C	LTR55	LTR/ERVL?	(30)	518	1	841765
796	13.9	10.3	0.0	chr12	46046586	46046751	(87228558)	+	L1MB5	LINE/L1	1530	1714	(4932)	841766
1683	15.7	19.7	2.8	chr12	46046729	46046754	(87228555)	+	L1MB5	LINE/L1	1859	1889	(5628)	841766
1925	16.4	5.9	5.9	chr12	46046755	46047142	(87228167)	+	MLT1B	LTR/ERVL-MaLR	3	390	(0)	841767
1808	32.5	5.1	5.8	chr12	46093431	46095133	(87180176)	+	PABL_B-int	LTR/ERV1	4641	6374	(748)	841819
5679	21.6	7.7	5.7	chr12	50799387	50800467	(82474842)	+	L1MB8	LINE/L1	1019	2140	(4500)	850031
1973	13.7	0.7	0.7	chr12	53364799	53365091	(79910218)	C	AluSz	SINE/Alu	(19)	293	1	854587
16	6.8	6.5	0.0	chr12	53365092	53365122	(79910187)	+	(TTATT)n	Simple_repeat	1	33	(0)	854588
233	30.7	14.8	3.7	chr12	53365300	53365433	(79909876)	+	L2c	LINE/L2	3219	3370	(5)	854589
2113	9.5	4.1	0.0	chr12	56316550	56316832	(76958477)	C	AluSg7	SINE/Alu	(14)	295	1	859298
25123	6.7	0.7	0.1	chr12	56969221	56973772	(76301537)	+	L1PA5	LINE/L1	1076	5650	(677)	860507
610	28.0	9.5	2.5	chr12	67708081	67708325	(65566984)	+	MIRc	SINE/MIR	3	266	(2)	876305
425	33.3	5.4	1.5	chr12	71392936	71393137	(61882172)	+	MIR	SINE/MIR	2	216	(52)	882249
242	20.9	0.0	6.9	chr12	75511955	75512026	(57763283)	C	L2c	LINE/L2	(0)	3387	3321	887648
474	26.7	8.8	8.9	chr12	76078672	76079243	(57196066)	+	L1MEg	LINE/L1	995	1565	(4677)	888570
1517	12.7	10.2	0.0	chr12	76079244	76079472	(57195837)	+	AluJr4	SINE/Alu	1	255	(57)	888572
8622	19.9	8.2	2.8	chr12	76367258	76368768	(56906541)	C	L1M4	LINE/L1	(3721)	3026	1386	889130
322	32.5	2.4	0.6	chr12	78836368	78836528	(54438781)	+	LTR33A	LTR/ERVL	347	510	(10)	892703
5526	22.1	8.0	3.3	chr12	96343597	96344835	(36930474)	+	L1MB4	LINE/L1	854	2168	(5349)	918881
977	24.0	5.7	0.3	chr12	98484732	98485015	(34790294)	+	L1ME3D	LINE/L1	5931	6230	(12)	922319
2357	7.5	0.7	3.5	chr12	98485089	98485406	(34789903)	+	AluSq	SINE/Alu	1	309	(4)	922320
281	29.8	6.9	0.0	chr12	100422669	100422762	(32852547)	+	L2a	LINE/L2	2474	2574	(845)	925520
2446	26.5	6.7	8.1	chr12	100422814	100423436	(32851873)	C	L1MEg	LINE/L1	(4958)	1126	525	925521
622	21.3	2.4	7.1	chr12	101160737	101161004	(32114305)	+	HAL1	LINE/L1	1105	1359	(1148)	926757
738	31.3	4.7	2.3	chr12	101161023	101161414	(32113895)	+	HAL1	LINE/L1	1459	1860	(647)	926757
807	27.3	5.3	6.7	chr12	103917712	103918174	(29357135)	+	L1MEc	LINE/L1	1557	2019	(5109)	931527
635	19.9	1.5	2.3	chr12	103918237	103918255	(29357054)	C	AluSz6	SINE/Alu	(177)	135	6	931529
28	3.3	0.0	0.0	chr12	103918256	103918286	(29357023)	+	(TGTTTTT)n	Simple_repeat	1	31	(0)	931530
5224	21.6	9.8	5.0	chr12	106217599	106218687	(27056622)	C	L1MEc	LINE/L1	(4615)	1800	505	935829
203	29.5	1.6	1.6	chr12	106224148	106224209	(27051100)	C	MIR3	SINE/MIR	(5)	203	142	935844
4307	19.8	5.3	3.1	chr12	106528598	106529292	(26746017)	+	L1MCb	LINE/L1	1402	2125	(4626)	936385
1857	20.5	5.0	8.3	chr12	115555952	115556222	(17719087)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	209	956266
2348	11.4	0.0	0.0	chr12	115556223	115556528	(17718781)	C	AluSx	SINE/Alu	(3)	309	4	956267
1705	20.0	0.3	2.0	chr12	116208684	116208988	(17066321)	+	AluJr4	SINE/Alu	1	300	(12)	957529
1884	19.2	0.0	0.0	chr12	116316877	116317184	(16958125)	+	AluJb	SINE/Alu	1	308	(4)	957730
1228	24.7	9.7	5.0	chr12	116317185	116317543	(16957766)	+	MLT1C	LTR/ERVL-MaLR	91	466	(1)	957729
3018	25.2	5.4	4.3	chr12	117013906	117015417	(16259892)	C	L1MEf	LINE/L1	(4954)	1686	9	959408
986	26.2	9.0	2.9	chr12	117494590	117494974	(15780335)	C	L2a	LINE/L2	(37)	3389	2979	960483
2493	16.9	6.8	8.8	chr12	119744822	119745613	(13529696)	+	L1MEc	LINE/L1	1089	1863	(4537)	965419
5481	19.8	5.5	5.4	chr12	121072457	121072731	(12202578)	+	L1MB7	LINE/L1	1116	1381	(6136)	968530
1767	21.5	4.5	1.8	chr12	121072732	121073185	(12202124)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	968532
5481	19.8	5.5	5.4	chr12	121073186	121073591	(12201718)	+	L1MB7	LINE/L1	1382	1812	(5705)	968530
2251	9.9	0.0	0.3	chr12	128804451	128804742	(4470567)	+	AluSg	SINE/Alu	2	292	(18)	983894
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
1053	25.2	10.6	3.8	chr13	26596380	26597082	(87767246)	C	L1MEg	LINE/L1	(4699)	2338	1549	1003520
10886	14.9	4.0	3.3	chr13	28513256	28514282	(85850046)	C	L1MCa	LINE/L1	(4483)	2025	998	1006866
13044	18.0	4.4	2.8	chr13	29800772	29804771	(84559557)	+	L1PREC2	LINE/L1	1386	5457	(2684)	1008648
261	27.3	10.3	0.7	chr13	29923640	29923780	(84440548)	C	MIRb	SINE/MIR	(25)	183	18	1008838
15970	11.3	1.7	0.9	chr13	43851427	43855363	(70508965)	+	L1PA13	LINE/L1	1063	5014	(1752)	1029425
185	26.9	4.9	2.5	chr13	45417446	45417525	(68946803)	C	X6A_LINE	LINE/CR1	(443)	637	556	1032246
4558	16.1	4.2	0.3	chr13	50744617	50745570	(63618758)	+	L1MB3	LINE/L1	5184	6182	(1)	1040593
2406	26.9	7.2	3.0	chr13	52386936	52388475	(61975853)	+	L1MCa	LINE/L1	799	2576	(4461)	1043027
3715	14.1	30.9	0.0	chr13	62211750	62212615	(52151713)	C	LTR12D	LTR/ERV1	(0)	1254	1	1055709
3357	26.8	4.6	4.4	chr13	62357242	62358476	(52005852)	+	L1M1	LINE/L1	153	2054	(5511)	1055915
4528	20.1	3.9	1.9	chr13	63203514	63203823	(51160505)	+	L1M4b	LINE/L1	5088	5413	(1593)	1056970
2134	24.4	2.9	11.5	chr13	63203824	63204457	(51159871)	+	MER70B	LTR/ERVL	1	578	(0)	1056975
1740	15.2	2.5	0.4	chr13	64424012	64424280	(49940048)	+	AluJb	SINE/Alu	25	299	(13)	1058499
21953	10.1	1.2	2.2	chr13	64827748	64834170	(49530158)	+	L1PA7	LINE/L1	4	6466	(3)	1059031
2768	17.7	14.2	7.5	chr13	64879796	64880504	(49483824)	C	LTR1	LTR/ERV1	(18)	765	1	1059088
5163	21.5	3.2	2.5	chr13	65732630	65733889	(48630439)	+	L1MA4	LINE/L1	1254	2526	(5039)	1060158
3444	19.8	8.2	2.4	chr13	65747379	65748087	(48616241)	C	L1MB2	LINE/L1	(9)	6660	5884	1060170
5382	10.3	0.4	0.8	chr13	65748088	65748870	(48615458)	C	LTR17	LTR/ERV1	(0)	780	1	1060171
4015	10.9	4.2	0.2	chr13	65768452	65769069	(48595259)	C	LTR9B	LTR/ERV1	(0)	644	1	1060193
667	21.2	7.0	2.6	chr13	65769151	65769301	(48595027)	+	AluJr	SINE/Alu	129	286	(26)	1060194
968	32.6	10.2	7.4	chr13	66007965	66009201	(48355127)	+	ERVL-E-int	LTR/ERVL	1356	2738	(3019)	1060515
8304	10.2	13.8	2.4	chr13	66009202	66010503	(48353825)	+	LTR12C	LTR/ERV1	3	1491	(88)	1060516
345	34.2	13.5	1.4	chr13	66537444	66537692	(47826636)	C	L2a	LINE/L2	(273)	3153	2870	1061163
1241	26.0	4.2	5.8	chr13	66699337	66699798	(47664530)	+	MLT1C	LTR/ERVL-MaLR	13	466	(1)	1061346
291	34.8	5.9	5.9	chr13	66943878	66944097	(47420231)	+	MIRc	SINE/MIR	33	252	(16)	1061657
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
10394	16.4	1.5	0.2	chr13	71034927	71036079	(43328249)	+	L1PA14	LINE/L1	3360	4523	(3618)	1066935
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
18050	11.4	3.7	1.0	chr13	75612970	75616042	(38748286)	C	L1MA3	LINE/L1	(1131)	6434	3259	1073651
14	16.9	0.0	2.9	chr13	77697539	77697573	(36666755)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	1076566
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
30	25.8	4.7	2.2	chr13	77698061	77698189	(36666139)	+	(GCC)n	Simple_repeat	1	135	(0)	1076568
1278	24.8	8.4	2.8	chr13	78823260	78823694	(35540634)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	1078078
6245	8.8	0.4	1.5	chr13	79172673	79173672	(35190656)	C	L1PB1	LINE/L1	(369)	5782	4785	1078549
1457	19.1	3.4	5.0	chr13	79395471	79395768	(34968560)	+	AluJo	SINE/Alu	14	306	(6)	1078859
1076	29.8	7.0	4.3	chr13	79395769	79396227	(34968101)	+	L1MEf	LINE/L1	1825	2285	(4752)	1078856
1242	24.7	11.6	1.1	chr13	79396201	79396740	(34967588)	+	L1MEf	LINE/L1	3830	4433	(2508)	1078856
19	26.2	0.0	3.0	chr13	79405803	79405869	(34958459)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	1078870
7022	6.7	1.3	0.0	chr13	79461585	79462975	(34901353)	C	L1PA8	LINE/L1	(13)	6159	4754	1078975
443	26.3	16.4	3.7	chr13	79599205	79599321	(34765007)	C	MIRc	SINE/MIR	(17)	251	116	1079174
10209	6.4	11.2	0.1	chr13	79599322	79600725	(34763603)	C	LTR12C	LTR/ERV1	(0)	1579	1	1079175
460	32.9	16.8	3.4	chr13	79989205	79990545	(34373783)	+	L2b	LINE/L2	721	2277	(1142)	1079628
2277	11.1	0.0	0.3	chr13	80135313	80135609	(34228719)	+	AluSx1	SINE/Alu	1	296	(16)	1079830
2295	16.8	3.8	2.7	chr13	80135610	80135764	(34228564)	+	L1M3	LINE/L1	5330	5488	(680)	1079829
2312	9.7	0.3	0.7	chr13	80135765	80136063	(34228265)	+	AluSq10	SINE/Alu	1	298	(15)	1079831
3783	23.7	4.1	5.7	chr13	80415579	80417363	(33946965)	C	L1MCb	LINE/L1	(4897)	1854	3	1080319
2181	14.2	4.5	0.8	chr13	80589149	80589509	(33774819)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1080498
699	27.9	5.8	3.0	chr13	80589510	80589766	(33774562)	C	L1MEg	LINE/L1	(4854)	1346	1042	1080497
258	28.6	12.9	6.5	chr13	80589827	80590043	(33774285)	C	L2a	LINE/L2	(786)	2633	2401	1080493
5255	16.1	7.3	1.2	chr13	84166285	84167637	(30196691)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	3	1084891
1109	20.9	4.4	4.2	chr13	86536026	86536201	(27828127)	C	L1MB5	LINE/L1	(869)	5450	5283	1087861
2260	11.0	0.0	2.8	chr13	86536202	86536520	(27827808)	C	AluSg	SINE/Alu	(0)	310	1	1087864
2665	24.1	5.0	8.7	chr13	90194523	90195424	(24168904)	C	L1MCa	LINE/L1	(4621)	2130	1267	1092624
233	27.8	5.0	6.5	chr13	94328131	94328253	(20036075)	C	MER5A	DNA/hAT-Charlie	(32)	157	37	1098132
1405	28.1	4.8	6.3	chr13	109699670	109700224	(4664104)	+	MER119	DNA/hAT-Charlie	38	583	(0)	1120402
547	27.4	14.4	0.0	chr13	109700341	109700636	(4663692)	+	HAL1ME	LINE/L1	741	1086	(1379)	1120403
2179	14.6	0.0	0.0	chr14	22761521	22761822	(84281896)	+	AluSz6	SINE/Alu	1	302	(10)	1131660
3651	20.5	7.3	7.4	chr14	22761823	22762258	(84281460)	+	L1M4c	LINE/L1	1576	1973	(4776)	1131659
1594	16.2	4.8	4.1	chr14	22762259	22762548	(84281170)	+	AluJb	SINE/Alu	1	292	(20)	1131661
661	27.1	2.5	4.3	chr14	24396321	24396528	(82647190)	C	LTR88b	LTR/Gypsy?	(625)	212	9	1134213
1262	26.5	8.3	0.9	chr14	31927544	31928095	(75115623)	+	L2a	LINE/L2	2813	3426	(0)	1144379
983	0.0	0.0	0.0	chr14	32202045	32202150	(74841568)	+	U6	snRNA	1	106	(1)	1144827
5144	18.9	5.7	2.4	chr14	32208675	32209586	(74834132)	+	MER92-int	LTR/ERV1	654	1606	(3612)	1144836
1172	24.5	4.0	1.7	chr14	32209590	32210004	(74833714)	C	L1M5	LINE/L1	(2778)	3368	2944	1144838
4897	10.9	2.1	2.3	chr14	32409862	32410629	(74633089)	+	MER4E	LTR/ERV1	1	766	(0)	1145120
827	21.9	15.3	0.0	chr14	36324659	36324918	(70718800)	C	LTR50	LTR/ERVL	(0)	795	489	1151427
553	23.1	3.6	1.4	chr14	36324973	36325145	(70718573)	+	L1MEc	LINE/L1	1262	1474	(4941)	1151428
650	17.5	3.4	0.0	chr14	36325146	36325259	(70718459)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	441	1151429
506	25.0	8.8	0.5	chr14	36325288	36325433	(70718285)	C	MLT1F1	LTR/ERVL-MaLR	(380)	189	31	1151430
19	11.5	2.6	0.0	chr14	50560764	50560801	(56482917)	+	(GGGCGGC)n	Simple_repeat	1	39	(0)	1170157
1638	22.3	10.0	5.7	chr14	51742819	51744346	(55299372)	+	SATR1	Satellite	1	1806	(876)	1171921
873	32.8	11.7	7.0	chr14	52563000	52563502	(54480216)	+	L2c	LINE/L2	1947	2473	(946)	1173124
934	17.1	2.7	0.0	chr14	52563503	52563648	(54480070)	+	FRAM	SINE/Alu	2	151	(25)	1173125
15	22.0	2.0	2.0	chr14	52695751	52695799	(54347919)	+	(CCCCG)n	Simple_repeat	1	50	(0)	1173340
20	17.5	0.0	2.1	chr14	52695949	52695995	(54347723)	+	(CCCGC)n	Simple_repeat	1	47	(0)	1173341
2298	12.2	0.0	0.0	chr14	53137310	53137621	(53906097)	+	AluSz6	SINE/Alu	1	312	(0)	1174090
2657	26.0	11.4	7.8	chr14	53137622	53138084	(53905634)	+	L1MEc	LINE/L1	1199	1709	(4691)	1174088
19	0.0	0.0	0.0	chr14	53146932	53146952	(53896766)	+	(T)n	Simple_repeat	1	21	(0)	1174107
6578	19.5	7.6	2.5	chr14	58414828	58415933	(48627785)	+	L1MDa	LINE/L1	565	1733	(4900)	1182206
2115	14.8	0.0	3.7	chr14	58415934	58416257	(48627461)	+	AluSz	SINE/Alu	1	312	(0)	1182207
1887	16.4	2.7	0.0	chr14	64864175	64864461	(42179257)	+	AluJo	SINE/Alu	1	295	(17)	1192003
354	29.6	5.7	6.1	chr14	64864463	64864692	(42179026)	+	L1ME3G	LINE/L1	563	791	(133)	1192004
12325	20.8	5.1	4.9	chr14	68072669	68076015	(38967703)	C	L1PA15	LINE/L1	(2774)	5229	1598	1197184
2514	22.7	11.1	8.5	chr14	73383167	73383733	(33659985)	+	L1MEg	LINE/L1	665	1305	(4779)	1206106
2323	11.3	0.0	0.3	chr14	73383734	73384042	(33659676)	+	AluSx	SINE/Alu	1	308	(4)	1206109
2450	8.6	0.7	0.0	chr14	75544284	75544587	(31499131)	+	AluSx	SINE/Alu	2	307	(5)	1210669
209	31.1	2.8	5.5	chr14	75544615	75544723	(31498995)	+	MER5A	DNA/hAT-Charlie	84	189	(0)	1210670
20	0.0	0.0	0.0	chr14	75544793	75544814	(31498904)	+	(T)n	Simple_repeat	1	22	(0)	1210671
272	27.7	15.6	2.5	chr14	90332229	90332419	(16711299)	+	MIR	SINE/MIR	40	267	(1)	1233690
2379	14.8	5.8	0.7	chr14	94076834	94077240	(12966478)	+	Tigger2a	DNA/TcMar-Tigger	1	429	(5)	1240569
703	25.5	9.6	1.3	chr14	94077448	94077685	(12966033)	+	MIR	SINE/MIR	2	261	(1)	1240570
31	0.0	0.0	0.0	chr14	99975017	99975045	(7068673)	+	(CCTTGG)n	Simple_repeat	1	29	(0)	1250935
2737	23.8	5.2	4.5	chr14	99975170	99975490	(7068228)	C	L1ME3B	LINE/L1	(4736)	1506	1165	1250932
2105	17.2	1.5	0.0	chr14	99975491	99975822	(7067896)	C	MER1B	DNA/hAT-Charlie	(0)	339	3	1250936
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
6604	7.7	0.8	0.9	chr15	29027988	29029311	(72961878)	C	L1PA10	LINE/L1	(0)	6168	4849	1274892
13	18.3	4.4	2.1	chr15	39662318	39662362	(62328827)	+	A-rich	Low_complexity	1	47	(0)	1289978
3677	20.0	15.7	9.3	chr15	40678684	40679326	(61311863)	C	L1MA3	LINE/L1	(5118)	2447	1653	1291691
2505	6.7	0.0	0.0	chr15	40679327	40679623	(61311566)	C	AluYf1	SINE/Alu	(14)	297	1	1291709
1617	18.8	7.4	10.3	chr15	44298772	44299246	(57691943)	+	MLT1C	LTR/ERVL-MaLR	8	467	(0)	1298596
2022	29.0	8.4	5.5	chr15	56273245	56274518	(45716671)	C	L1MEf	LINE/L1	(4207)	2830	1500	1316913
6668	20.2	9.0	5.6	chr15	60243641	60246447	(41744742)	+	L1MCa	LINE/L1	10	2925	(3396)	1323478
1026	15.2	0.0	0.0	chr15	62060931	62061095	(39930094)	C	AluJo	SINE/Alu	(0)	312	148	1326277
915	29.5	5.5	3.7	chr15	63419809	63420185	(38571004)	+	LTR16D2	LTR/ERVL	76	454	(118)	1328516
1984	18.5	6.2	3.3	chr15	63420186	63420638	(38570551)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1328517
915	29.7	10.5	2.5	chr15	63420639	63420736	(38570453)	+	LTR16D2	LTR/ERVL	455	553	(19)	1328516
241	18.1	19.1	0.0	chr15	64906522	64906593	(37084596)	C	MIRc	SINE/MIR	(128)	140	52	1331480
1850	13.8	5.9	1.9	chr15	64906656	64906980	(37084209)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1331481
2073	4.4	0.7	12.4	chr15	65296541	65296879	(36694310)	+	AluY	SINE/Alu	4	302	(9)	1332325
2008	7.2	13.0	0.0	chr15	66903469	66903730	(35087459)	C	AluSg7	SINE/Alu	(8)	301	1	1335676
4151	18.4	6.0	2.6	chr15	67276465	67277530	(34713659)	C	L1MCb	LINE/L1	(4753)	2375	1179	1336354
1998	26.1	5.7	3.7	chr15	67351378	67352866	(34638323)	C	L1MEd	LINE/L1	(4867)	2236	1215	1336481
1126	27.7	7.7	10.4	chr15	67352865	67352892	(34638297)	+	L1M5	LINE/L1	3013	3036	(3110)	1336482
2126	11.4	0.0	0.0	chr15	67352893	67353172	(34638017)	+	AluSg	SINE/Alu	28	307	(3)	1336483
1126	27.7	7.7	10.4	chr15	67353173	67353354	(34637835)	+	L1M5	LINE/L1	3037	3192	(2954)	1336482
1712	21.1	9.5	1.9	chr15	67905584	67906194	(34084995)	C	L1MEg	LINE/L1	(5520)	1583	910	1337335
3561	24.9	7.7	2.3	chr15	68443292	68444956	(33546233)	C	L1MEg	LINE/L1	(3602)	2717	964	1338353
7623	23.3	8.0	3.4	chr15	68968042	68970582	(33020607)	+	L1M4	LINE/L1	39	2792	(3852)	1339382
3906	24.6	11.9	6.5	chr15	73064796	73066019	(28925170)	C	L1MEg	LINE/L1	(4015)	2069	788	1346549
4537	17.9	9.7	1.0	chr15	76459386	76460817	(25530372)	C	L1MA4A	LINE/L1	(842)	5461	4152	1352605
23014	8.7	1.5	1.1	chr15	76627361	76632189	(25359000)	C	L1PA10	LINE/L1	(75)	6408	1572	1352845
8107	24.4	4.0	3.5	chr15	76681452	76683818	(25307371)	+	L1PA13	LINE/L1	10	2498	(4287)	1352914
636	21.3	3.8	0.0	chr15	76683819	76683945	(25307244)	+	AluJr	SINE/Alu	2	133	(179)	1352915
8107	16.8	3.5	1.4	chr15	76683949	76684372	(25306817)	+	L1PA13	LINE/L1	2499	2918	(3848)	1352914
680	17.1	0.0	0.0	chr15	76684373	76684495	(25306694)	+	L1MA3	LINE/L1	6183	6305	(0)	1352916
3954	21.3	7.5	5.3	chr15	80516857	80518274	(21472915)	C	L1MCa	LINE/L1	(4337)	2323	744	1359628
10113	16.0	6.6	2.1	chr15	81920472	81922680	(20068509)	+	L1M4c	LINE/L1	423	2739	(3643)	1362030
7519	19.9	12.0	7.8	chr15	85131057	85132147	(16859042)	C	L1M4	LINE/L1	(3760)	2981	1697	1367289
619	20.4	0.0	0.1	chr15	85132148	85132259	(16858930)	C	FLAM_C	SINE/Alu	(9)	124	13	1367292
7519	19.9	12.0	7.8	chr15	85132260	85132479	(16858710)	C	L1M4	LINE/L1	(3760)	1696	1436	1367289
4462	7.1	0.5	0.0	chr15	85157822	85158372	(16832817)	C	MER41A	LTR/ERV1	(0)	554	1	1367332
21	15.4	0.0	2.2	chr15	85158417	85158461	(16832728)	+	A-rich	Low_complexity	1	45	(0)	1367333
1163	16.5	5.6	0.8	chr15	85158475	85158712	(16832477)	+	L1MB4	LINE/L1	1623	1872	(5645)	1367334
868	12.6	0.8	0.8	chr15	85158715	85158842	(16832347)	+	MLT1B	LTR/ERVL-MaLR	262	389	(1)	1367335
14393	17.1	5.8	2.7	chr15	85158895	85159504	(16831685)	+	L1MB4	LINE/L1	2454	3048	(3596)	1367334
2136	15.6	0.0	0.0	chr15	85802398	85802699	(16188490)	C	AluSx	SINE/Alu	(10)	302	1	1368371
2742	18.9	8.2	6.1	chr15	85802700	85802741	(16188448)	C	LTR8A	LTR/ERV1	(683)	44	1	1368370
2305	11.8	0.0	0.0	chr15	85802904	85803209	(16187980)	+	AluSx	SINE/Alu	1	306	(6)	1368372
5569	22.1	9.4	2.6	chr15	89609772	89612287	(12378902)	C	L1M4	LINE/L1	(2974)	3773	942	1374563
9173	16.6	5.1	0.5	chr15	92688027	92689597	(9301592)	+	MSTB-int	LTR/ERVL-MaLR	5	1651	(0)	1380238
11124	9.8	1.8	1.3	chr15	95699988	95701558	(6289631)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1384830
2469	24.4	7.3	3.4	chr15	98994603	98995319	(2995870)	C	L1MEd	LINE/L1	(5335)	1751	982	1389406
1636	14.8	0.0	0.8	chr15	99025947	99026189	(2965000)	C	AluSc	SINE/Alu	(68)	241	1	1389463
18	24.8	0.0	2.2	chr15	99790753	99790798	(2200391)	+	(AC)n	Simple_repeat	1	46	(0)	1390626
14	29.7	0.0	1.8	chr15	100544485	100544539	(1446650)	+	G-rich	Low_complexity	1	55	(0)	1391615
12	25.6	2.1	2.0	chr15	100544617	100544664	(1446525)	+	(CCGTCC)n	Simple_repeat	1	49	(0)	1391616
17	4.9	0.0	0.0	chr15	101735038	101735058	(256131)	+	(AG)n	Simple_repeat	1	21	(0)	1393201
875	13.0	0.0	0.0	chr15	101735059	101735173	(256016)	C	AluJo	SINE/Alu	(197)	115	1	1393202
413	34.6	9.7	1.0	chr15	101735269	101735475	(255714)	C	L1M5	LINE/L1	(1184)	4962	4736	1393203
5043	20.7	4.8	2.9	chr16	2356778	2357153	(87981192)	C	L1MC1	LINE/L1	(5400)	2117	1738	1397276
1551	15.9	7.1	2.8	chr16	2357154	2357436	(87980909)	+	AluJr	SINE/Alu	1	296	(16)	1397282
5043	20.7	4.8	2.9	chr16	2357437	2358291	(87980054)	C	L1MC1	LINE/L1	(5780)	1737	857	1397276
2354	22.8	5.7	3.5	chr16	2802897	2804020	(87534325)	C	L1M4	LINE/L1	(3755)	3251	1910	1397936
258	26.9	0.0	0.0	chr16	2804123	2804174	(87534171)	C	MIRc	SINE/MIR	(104)	164	113	1397953
2138	7.8	2.4	0.0	chr16	3003322	3003603	(87334742)	+	AluSx1	SINE/Alu	1	289	(23)	1398321
1749	12.7	0.0	12.4	chr16	3003604	3003820	(87334525)	+	AluJb	SINE/Alu	137	310	(2)	1398320
131	0.0	0.0	0.9	chr16	3849379	3849494	(86488851)	+	(GT)n	Simple_repeat	1	116	(0)	1399905
244	13.5	0.0	0.0	chr16	20928930	20928966	(69409379)	C	MSTD	LTR/ERVL-MaLR	(205)	191	155	1436726
624	12.0	5.7	0.0	chr16	20928978	20929077	(69409268)	C	MSTD	LTR/ERVL-MaLR	(290)	106	1	1436726
1130	24.3	4.9	5.3	chr16	20929091	20929503	(69408842)	+	MamRep137	DNA/TcMar-Tigger	69	479	(31)	1436733
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
13	18.1	2.0	6.0	chr16	50742150	50742198	(39596147)	+	G-rich	Low_complexity	1	50	(0)	1473097
3915	22.5	4.8	2.8	chr16	53149863	53151193	(37187152)	C	L1MB4	LINE/L1	(3784)	2963	1561	1477357
7007	15.5	4.4	2.5	chr16	54902828	54904241	(35434104)	+	L1MC1	LINE/L1	916	2356	(4152)	1480369
11924	8.8	2.0	0.1	chr16	56379444	56380994	(33957351)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1482962
377	25.9	3.6	6.0	chr16	81777239	81777439	(8560906)	C	Charlie7a	DNA/hAT-Charlie	(1)	271	76	1528015
417	30.6	3.7	5.8	chr16	81777454	81777730	(8560615)	+	Kanga2_a	DNA/TcMar-Tc2	233	503	(385)	1528016
2437	10.5	0.0	0.3	chr16	81777734	81778046	(8560299)	+	AluSz	SINE/Alu	1	312	(0)	1528017
264	37.2	4.5	0.0	chr16	88921927	88922074	(1416271)	C	MIRb	SINE/MIR	(93)	175	21	1540601
530	26.6	11.7	0.7	chr16	89714629	89714732	(623613)	C	L1MEg	LINE/L1	(4935)	1149	1046	1541714
2090	8.8	0.4	0.0	chr16	89714733	89714992	(623353)	C	AluSg	SINE/Alu	(9)	301	41	1541715
1121	25.8	4.7	7.7	chr17	682684	683584	(82573857)	+	L1MCa	LINE/L1	1435	2700	(4242)	1545587
13	25.3	2.0	2.0	chr17	13563922	13563970	(69693471)	+	(TTATTAA)n	Simple_repeat	1	50	(0)	1569978
199	35.1	8.6	0.8	chr17	16371867	16371995	(66885446)	+	L2c	LINE/L2	2699	2838	(581)	1574831
1766	14.8	3.4	4.0	chr17	16372079	16372375	(66885066)	+	AluJb	SINE/Alu	1	295	(17)	1574832
495	32.2	13.9	3.0	chr17	19619144	19619840	(63637601)	+	L2	LINE/L2	711	1495	(1924)	1580970
6725	20.1	6.0	4.6	chr17	19619841	19620337	(63637104)	C	L1M4	LINE/L1	(5825)	1692	1184	1580971
446	15.9	8.9	6.5	chr17	19992952	19993126	(63264315)	+	FRAM	SINE/Alu	6	296	(6)	1581721
1967	13.9	1.3	0.0	chr17	19993138	19993440	(63264001)	+	AluJo	SINE/Alu	6	312	(0)	1581722
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1127	32.2	7.8	2.6	chr17	29033873	29034898	(54222543)	+	L1MEg	LINE/L1	49	1292	(4933)	1589809
2984	0.3	0.0	0.0	chr17	29783785	29784093	(53473348)	+	AluYa5	SINE/Alu	1	309	(2)	1591347
2211	12.0	0.7	0.0	chr17	29784105	29784396	(53473045)	+	AluSx	SINE/Alu	1	294	(18)	1591348
1369	9.1	0.0	1.1	chr17	29784440	29784615	(53472826)	+	AluSx1	SINE/Alu	126	299	(13)	1591349
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
4629	23.1	11.0	7.1	chr17	37078826	37079964	(46177477)	C	L1MB2	LINE/L1	(286)	2370	1152	1605212
239	20.7	1.7	0.0	chr17	37609732	37609789	(45647652)	+	L1ME3E	LINE/L1	6115	6173	(69)	1606177
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
2273	9.8	0.0	0.0	chr17	45564771	45565055	(37692386)	+	AluSc	SINE/Alu	1	285	(24)	1622286
12	24.1	0.0	0.0	chr17	45565247	45565280	(37692161)	+	(TATG)n	Simple_repeat	1	34	(0)	1622287
24	33.6	0.9	1.8	chr17	45565291	45565399	(37692042)	+	(TACA)n	Simple_repeat	1	110	(0)	1622288
6706	5.1	1.4	0.9	chr17	46534195	46535048	(36722393)	C	SVA_C	Retroposon/SVA	(0)	1384	527	1624266
2380	9.0	0.3	0.0	chr17	49422187	49422486	(33834955)	+	AluSx1	SINE/Alu	1	301	(11)	1629915
11375	13.8	0.9	3.0	chr17	49422487	49423059	(33834382)	C	L1MA4A	LINE/L1	(3942)	3263	2702	1629903
1529	25.4	5.2	3.1	chr17	50008807	50009400	(33248041)	C	L2a	LINE/L2	(9)	3417	2812	1630982
2895	20.3	6.1	5.7	chr17	50009402	50009625	(33247816)	C	L1M4	LINE/L1	(5797)	1720	1493	1630983
2373	10.8	0.0	0.0	chr17	50009626	50009921	(33247520)	C	AluSc	SINE/Alu	(10)	299	4	1630984
2538	26.5	7.6	5.0	chr17	51959339	51960676	(31296765)	+	L1MEf	LINE/L1	561	1939	(4701)	1634704
295	24.2	10.3	1.1	chr17	57424297	57424406	(25833035)	+	MIRb	SINE/MIR	50	170	(98)	1643248
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
1497	28.4	8.3	2.9	chr17	62530499	62531363	(20726078)	C	L1MEd	LINE/L1	(5175)	1928	1001	1653202
440	28.3	7.0	12.2	chr17	62825460	62825656	(20431785)	C	MER102b	DNA/hAT-Charlie	(142)	199	14	1653761
903	16.7	4.0	0.0	chr17	62825684	62825827	(20431614)	C	AluJb	SINE/Alu	(18)	294	145	1653762
369	32.4	12.7	1.8	chr17	63550930	63551146	(19706295)	C	MIRb	SINE/MIR	(22)	246	3	1654904
1074	19.4	10.9	5.9	chr17	67842741	67843080	(15414361)	+	L1MEf	LINE/L1	1408	1766	(4434)	1662938
9490	16.9	1.3	2.4	chr17	69685698	69688319	(13569122)	C	L1PA15	LINE/L1	(3066)	3700	1097	1666178
1594	18.1	7.6	2.0	chr17	74644225	74644623	(8612818)	+	L1MDa	LINE/L1	1227	1649	(4984)	1674534
574	32.1	15.2	2.3	chr17	74644651	74645378	(8612063)	+	L2b	LINE/L2	2306	3144	(243)	1674535
442	26.6	4.3	1.9	chr17	74670851	74671007	(8586434)	C	Charlie4z	DNA/hAT-Charlie	(5)	162	2	1674599
2271	9.2	0.0	0.0	chr17	75037063	75037368	(8220073)	+	AluY	SINE/Alu	1	306	(5)	1675219
203	37.0	1.9	3.3	chr17	75274295	75274568	(7982873)	+	L2	LINE/L2	2723	2992	(427)	1675727
13	12.1	3.6	0.0	chr17	81977766	81977793	(1279648)	+	G-rich	Low_complexity	1	29	(0)	1687002
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1552	23.0	7.2	5.1	chr17	82609471	82610239	(647202)	+	L1M4	LINE/L1	1269	1718	(5799)	1687959
656	19.1	5.4	5.8	chr17	82820467	82820672	(436769)	C	L1MB7	LINE/L1	(5842)	1675	1471	1688286
266	28.3	3.2	9.9	chr17	82820681	82820938	(436503)	C	L1MB7	LINE/L1	(5975)	1542	1332	1688286
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
3486	14.1	3.5	0.3	chr18	8684644	8685220	(71688065)	C	LTR26D	LTR/ERV1	(0)	604	9	1701772
3167	18.2	6.7	6.9	chr18	21031631	21032172	(59341113)	+	L1M4	LINE/L1	1139	1718	(5799)	1711801
286	18.8	0.0	3.0	chr18	21032194	21032259	(59341026)	+	L1M4	LINE/L1	2052	2115	(5402)	1711801
691	23.4	3.1	1.6	chr18	21032254	21032505	(59340780)	+	L1M4	LINE/L1	2352	2607	(4039)	1711801
17	8.9	0.0	0.0	chr18	21872675	21872698	(58500587)	+	(T)n	Simple_repeat	1	24	(0)	1713446
1738	20.1	5.2	3.0	chr18	21872699	21873164	(58500121)	+	L1MCa	LINE/L1	1506	1982	(4769)	1713443
471	23.6	9.5	7.9	chr18	22875613	22875668	(57497617)	C	L1ME4b	LINE/L1	(249)	643	589	1715142
3333	14.4	5.8	2.2	chr18	22875669	22876137	(57497148)	+	MER6A	DNA/TcMar-Tigger	1	500	(105)	1715144
1716	23.4	12.6	9.1	chr18	26070943	26071549	(54301736)	+	L1MEg	LINE/L1	937	1557	(4685)	1720276
11057	10.6	7.3	0.0	chr18	29298282	29300107	(51073178)	C	HERVL-int	LTR/ERVL	(2603)	3051	1091	1724884
5539	23.3	5.9	3.2	chr18	35203828	35205782	(45167503)	+	L1MDa	LINE/L1	44	2097	(4536)	1732995
7094	15.0	7.7	5.0	chr18	35213742	35214052	(45159233)	C	L1MB3	LINE/L1	(4783)	1601	1320	1732998
2344	11.7	0.3	0.0	chr18	35214053	35214361	(45158924)	C	AluSx1	SINE/Alu	(2)	310	1	1733001
7094	15.0	7.7	5.0	chr18	35214362	35215585	(45157700)	C	L1MB3	LINE/L1	(5065)	1319	21	1732998
2282	27.1	8.7	5.0	chr18	35474699	35475385	(44897900)	+	L1MCa	LINE/L1	977	1650	(4858)	1733370
4729	22.2	3.7	2.5	chr18	35955651	35956485	(44416800)	C	L1MEf	LINE/L1	(4205)	1995	1152	1734036
2081	13.5	1.8	0.0	chr18	35956486	35956766	(44416519)	C	AluSx	SINE/Alu	(26)	286	1	1734037
4729	22.2	3.7	2.5	chr18	35956767	35957172	(44416113)	C	L1MEf	LINE/L1	(5049)	1151	739	1734036
3225	19.1	10.3	1.5	chr18	36051751	36052597	(44320688)	+	L1M4	LINE/L1	1405	2334	(5183)	1734210
7426	21.5	5.5	4.0	chr18	50533753	50534052	(29839233)	C	L1M4	LINE/L1	(5606)	1911	1603	1755298
2427	12.9	0.0	0.0	chr18	50534053	50534355	(29838930)	C	AluSz	SINE/Alu	(9)	303	1	1755299
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
3989	26.0	8.0	7.6	chr18	56739123	56740980	(23632305)	C	L1MEg	LINE/L1	(4104)	3229	263	1764584
1315	21.1	6.4	11.9	chr18	60068997	60069492	(20303793)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1770027
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2040	14.7	1.0	0.0	chr18	79838412	79838710	(534575)	C	AluJo	SINE/Alu	(10)	302	1	1795820
3552	18.0	6.2	4.5	chr18	79838711	79839014	(534271)	+	L1ME3G	LINE/L1	3290	3628	(2909)	1795818
1607	17.6	4.3	3.3	chr18	79839015	79839316	(533969)	+	AluJr	SINE/Alu	1	305	(7)	1795821
6557	20.5	6.4	2.3	chr18	79839317	79840994	(532291)	+	L1ME3G	LINE/L1	3629	5442	(1095)	1795818
513	27.6	8.3	2.6	chr19	2773944	2774170	(55843446)	+	MLT1C	LTR/ERVL-MaLR	226	466	(1)	1801631
4734	17.1	3.7	3.2	chr19	6029738	6030374	(52587242)	+	L1MB8	LINE/L1	1256	1881	(5636)	1809298
1092	32.0	6.3	1.7	chr19	7059650	7060348	(51557268)	C	L1MEg	LINE/L1	(4327)	1757	1025	1811902
1292	13.8	7.1	6.8	chr19	7159203	7159431	(51458185)	C	L1MB3	LINE/L1	(47)	6136	5896	1812144
201	37.4	4.8	1.2	chr19	7159732	7159891	(51457725)	C	MIR3	SINE/MIR	(12)	196	31	1812146
192	31.2	0.0	0.0	chr19	10729488	10729551	(47888065)	C	L2a	LINE/L2	(328)	3098	3035	1820531
277	30.5	10.1	0.7	chr19	10729645	10729796	(47887820)	C	L1ME3G	LINE/L1	(10)	914	747	1820538
1887	16.7	0.3	0.3	chr19	10729865	10730163	(47887453)	C	AluJo	SINE/Alu	(13)	299	1	1820539
2587	5.7	0.0	0.0	chr19	11220823	11221123	(47396493)	C	AluY	SINE/Alu	(10)	301	1	1821754
1644	26.4	6.2	2.6	chr19	11221124	11221410	(47396206)	+	L1MEg	LINE/L1	831	1122	(4962)	1821753
316	26.6	16.3	2.1	chr19	11221560	11221701	(47395915)	C	MIR	SINE/MIR	(0)	262	97	1821755
1524	11.7	16.3	5.8	chr19	11693452	11693854	(46923762)	C	MER4B	LTR/ERV1	(45)	565	121	1822950
281	17.6	1.9	0.0	chr19	11693858	11693908	(46923708)	+	THE1D	LTR/ERVL-MaLR	1	52	(329)	1822952
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
908	10.8	3.0	1.6	chr19	14154461	14154589	(44463027)	C	AluJo	SINE/Alu	(181)	131	1	1828708
836	15.1	3.7	11.8	chr19	15103707	15103829	(43513787)	+	L1M4	LINE/L1	1481	1596	(5921)	1831127
2124	15.7	0.0	0.0	chr19	15103830	15104129	(43513487)	+	AluSx1	SINE/Alu	1	300	(12)	1831128
836	15.1	3.7	11.8	chr19	15104130	15104268	(43513348)	+	L1M4	LINE/L1	1597	1721	(5796)	1831127
582	30.2	15.3	1.9	chr19	15104347	15104862	(43512754)	C	L2a	LINE/L2	(61)	3365	2764	1831129
193	29.1	4.5	4.5	chr19	19034325	19034457	(39583159)	C	L2b	LINE/L2	(460)	2959	2827	1840113
1197	12.3	0.0	0.0	chr19	19034598	19034768	(39582848)	C	AluSx	SINE/Alu	(21)	291	121	1840114
1359	13.2	0.5	3.8	chr19	19034794	19034864	(39582752)	C	AluSz	SINE/Alu	(105)	207	142	1840115
2090	12.2	2.4	0.0	chr19	29936115	29936402	(28681214)	C	AluSq2	SINE/Alu	(18)	295	1	1851194
6543	20.7	3.6	5.2	chr19	29936403	29936750	(28680866)	C	L1M4	LINE/L1	(5679)	1838	1490	1851180
2187	13.3	0.3	0.0	chr19	29936751	29937051	(28680565)	C	AluSz	SINE/Alu	(10)	302	1	1851195
11525	20.0	5.9	3.4	chr19	29998053	29999703	(28617913)	C	L1MB2	LINE/L1	(3219)	3425	1640	1851281
325	35.6	0.0	0.0	chr19	30601114	30601228	(28016388)	C	MIR3	SINE/MIR	(9)	199	85	1852081
261	27.5	1.1	5.2	chr19	30601264	30601359	(28016257)	C	L2a	LINE/L2	(32)	3394	3303	1852082
249	25.0	5.6	4.5	chr19	35975596	35975683	(22641933)	C	MIR	SINE/MIR	(6)	256	168	1861595
1345	4.5	0.0	0.0	chr19	36234543	36234696	(22382920)	C	AluY	SINE/Alu	(157)	154	1	1862195
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
1959	13.8	5.2	1.7	chr19	39030612	39030907	(19586709)	C	AluSz	SINE/Alu	(5)	307	1	1868052
1553	14.4	0.3	10.0	chr19	45440720	45441039	(13176577)	C	AluJr	SINE/Alu	(20)	292	4	1881324
16	0.0	0.0	0.0	chr19	45863114	45863133	(12754483)	+	(CCG)n	Simple_repeat	1	20	(0)	1882442
2360	10.1	0.0	1.3	chr19	45863559	45863874	(12753742)	C	AluSz	SINE/Alu	(0)	312	1	1882443
2658	25.6	9.3	5.4	chr19	46380341	46381464	(12236152)	C	L1ME2	LINE/L1	(4377)	2660	1241	1883511
1176	33.9	1.4	1.9	chr19	46470583	46471094	(12146522)	C	MamGyp-int	LTR/Gypsy	(4557)	546	38	1883748
1086	23.7	9.0	2.9	chr19	46555336	46555594	(12062022)	+	L1MC5	LINE/L1	9017	9293	(11)	1883985
620	26.3	3.4	0.0	chr19	46555595	46555765	(12061851)	+	MLT1J-int	LTR/ERVL-MaLR	601	777	(610)	1883976
1280	21.2	4.6	2.2	chr19	46555795	46556155	(12061461)	+	L1MEg	LINE/L1	1018	1387	(4697)	1883988
1759	21.8	5.7	1.9	chr19	49382338	49382857	(9234759)	+	L1MEg	LINE/L1	1832	2372	(4961)	1890996
660	18.7	0.0	0.0	chr19	49382858	49382964	(9234652)	+	AluJb	SINE/Alu	185	291	(21)	1890999
294	21.4	10.1	0.0	chr19	49382965	49383053	(9234563)	+	L1MC5a	LINE/L1	2663	2761	(16)	1891000
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
2270	10.4	0.3	2.2	chr19	50538046	50538362	(8079254)	C	AluSx	SINE/Alu	(1)	311	1	1893733
12	20.6	6.7	0.0	chr19	51366809	51366853	(7250763)	+	(TCCCTA)n	Simple_repeat	1	48	(0)	1895482
131	4.8	2.1	2.6	chr19	54304742	54304927	(4312689)	+	(TTTC)n	Simple_repeat	1	190	(0)	1901463
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
3485	27.8	10.1	5.4	chr2	2194985	2197036	(239996493)	+	L1MEg	LINE/L1	160	2318	(3828)	1912946
4101	20.8	7.8	2.1	chr2	20815100	20817369	(221376160)	+	L1MDa	LINE/L1	1303	3717	(2820)	1940911
13	17.4	0.0	2.9	chr2	24123807	24123840	(218069689)	+	G-rich	Low_complexity	1	34	(0)	1945548
14	28.4	1.3	5.0	chr2	25216226	25216304	(216977225)	+	(GGCGCCC)n	Simple_repeat	1	80	(0)	1947541
5395	9.2	1.6	0.3	chr2	30548203	30548958	(211644571)	C	MER4E	LTR/ERV1	(0)	766	1	1957209
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2367	8.8	1.0	0.3	chr2	33215707	33216012	(208977517)	C	AluSc	SINE/Alu	(1)	308	1	1961616
14	25.4	3.1	3.0	chr2	38528184	38528247	(203665282)	+	(CCGGCCG)n	Simple_repeat	1	66	(0)	1969410
2213	24.8	7.7	5.4	chr2	39803201	39804375	(202389154)	C	L1MEg	LINE/L1	(4135)	2280	988	1971776
450	12.2	0.0	4.0	chr2	42828462	42828535	(199364994)	+	AluJb	SINE/Alu	62	132	(180)	1976393
232	32.4	7.2	3.4	chr2	42828721	42828949	(199364580)	+	MIRb	SINE/MIR	13	254	(14)	1976394
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
3185	19.4	7.7	0.9	chr2	61353727	61354512	(180839017)	+	L1MB4	LINE/L1	1167	2010	(4636)	2004145
24	26.7	4.6	0.0	chr2	62195999	62196085	(179997444)	+	G-rich	Low_complexity	1	91	(0)	2006020
17	8.8	0.0	0.0	chr2	65431207	65431230	(176762299)	+	(AC)n	Simple_repeat	1	24	(0)	2011234
16539	9.4	0.8	0.8	chr2	67808952	67813348	(174380181)	+	L1PB1	LINE/L1	255	6507	(360)	2014578
2631	28.4	7.8	8.4	chr2	74966704	74968220	(167225309)	C	L1ME3B	LINE/L1	(4541)	1701	203	2026256
8018	11.9	3.2	0.6	chr2	84362080	84364658	(157828871)	+	L1PB2	LINE/L1	3279	8144	(2)	2038881
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
13186	16.4	7.2	7.8	chr2	98049562	98051231	(144142298)	+	MER41-int	LTR/ERV1	2667	4378	(1568)	2054473
9876	17.4	3.1	2.6	chr2	98527073	98528795	(143664734)	+	L1MB7	LINE/L1	165	1904	(5613)	2055130
3386	6.8	3.2	0.6	chr2	105036333	105036996	(137156533)	C	MER4E1	LTR/ERV1	(1)	780	2	2064310
535	25.0	1.4	0.0	chr2	105037052	105037195	(137156334)	+	Charlie18a	DNA/hAT-Charlie	83	228	(114)	2064311
371	25.6	16.3	1.5	chr2	105235600	105235753	(136957776)	+	MIR	SINE/MIR	4	207	(61)	2064615
554	21.4	5.8	4.0	chr2	105235783	105235933	(136957596)	C	MER5A	DNA/hAT-Charlie	(35)	154	1	2064616
2117	11.5	3.0	0.7	chr2	110644203	110644498	(131549031)	+	AluSq	SINE/Alu	1	303	(10)	2072516
3770	19.0	9.0	2.4	chr2	110644499	110645153	(131548376)	+	L1MC2	LINE/L1	1527	2691	(3873)	2072514
645	25.8	11.0	5.8	chr2	119710982	119711359	(122482170)	+	LTR78B	LTR/ERV1	893	1292	(4)	2085815
357	23.9	14.2	0.0	chr2	119711362	119711470	(122482059)	+	MIRb	SINE/MIR	126	252	(16)	2085816
8901	17.7	7.8	3.2	chr2	119794229	119796243	(122397286)	C	MER52D	LTR/ERV1	(0)	2123	9	2085980
14	22.8	0.0	0.0	chr2	127526413	127526448	(114667081)	+	(GGCG)n	Simple_repeat	1	36	(0)	2097594
1922	14.3	8.7	0.7	chr2	127527075	127527554	(114665975)	+	MER92C	LTR/ERV1	8	590	(0)	2097595
9537	15.4	7.3	9.8	chr2	128242992	128244261	(113949268)	+	L1MC1	LINE/L1	521	1837	(4671)	2098949
2795	12.6	0.9	0.8	chr2	131630169	131630732	(110562797)	+	L1PA13	LINE/L1	2463	3029	(3737)	2103553
2274	27.5	9.0	6.8	chr2	138579222	138579580	(103613949)	C	L1MEf	LINE/L1	(4522)	1720	1406	2113625
29	0.0	0.0	0.0	chr2	138579581	138579608	(103613921)	+	(TGTTT)n	Simple_repeat	1	28	(0)	2113627
2274	27.5	9.0	6.8	chr2	138579609	138580203	(103613326)	C	L1MEf	LINE/L1	(4837)	1405	768	2113625
2989	20.2	6.0	2.7	chr2	143870592	143871403	(98322126)	+	L1M4	LINE/L1	1282	2121	(5396)	2120594
12	4.7	4.5	0.0	chr2	157839070	157839091	(84354438)	+	(TTTA)n	Simple_repeat	1	23	(0)	2139263
582	25.4	1.8	5.7	chr2	158953753	158953927	(83239602)	C	MIR	SINE/MIR	(54)	208	41	2140880
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
6844	22.3	7.2	5.7	chr2	164331043	164334788	(77858741)	C	L1MCa	LINE/L1	(1883)	4681	868	2148161
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
30	27.0	2.1	1.0	chr2	173964409	173964502	(68229027)	+	(GCC)n	Simple_repeat	1	96	(0)	2162457
15	28.4	0.0	0.0	chr2	173964569	173964615	(68228914)	+	G-rich	Low_complexity	1	47	(0)	2162458
18	0.0	0.0	0.0	chr2	173964685	173964706	(68228823)	+	(CGG)n	Simple_repeat	1	22	(0)	2162459
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
27	27.8	4.9	3.5	chr2	173964826	173964867	(68228662)	+	(CTCCCCT)n	Simple_repeat	4	170	(0)	2162461
12	17.1	2.9	2.8	chr2	173964835	173964869	(68228660)	+	(CGCT)n	Simple_repeat	1	36	(0)	2162462
13	7.8	3.5	3.3	chr2	173965000	173965028	(68228501)	+	(GGAGG)n	Simple_repeat	1	30	(0)	2162463
12	16.6	0.0	0.0	chr2	174648825	174648851	(67544678)	+	A-rich	Low_complexity	1	27	(0)	2163626
707	26.7	10.7	3.1	chr2	174648958	174649243	(67544286)	+	MamRep137	DNA/TcMar-Tigger	3	312	(198)	2163627
1443	26.5	7.2	3.1	chr2	174649267	174649721	(67543808)	+	MER74B	LTR/ERVL	74	548	(74)	2163628
49	2.0	2.0	0.0	chr2	174990214	174990263	(67203266)	+	(GT)n	Simple_repeat	1	51	(0)	2164130
25	35.6	1.0	0.0	chr2	174990264	174990366	(67203163)	+	GA-rich	Low_complexity	1	104	(0)	2164131
1531	18.7	9.2	6.4	chr2	178111735	178112186	(64081343)	+	MER31B	LTR/ERV1	1	466	(0)	2168565
2422	16.4	4.7	2.8	chr2	180518347	180518803	(61674726)	+	MLT1C	LTR/ERVL-MaLR	1	466	(1)	2171560
1246	20.0	9.9	4.9	chr2	189614353	189614678	(52578851)	+	MER2	DNA/TcMar-Tigger	1	344	(1)	2183090
302	35.9	2.0	6.2	chr2	196068201	196068411	(46125118)	C	MIRc	SINE/MIR	(63)	205	4	2191849
4530	12.2	3.6	1.5	chr2	202575189	202575861	(39617668)	+	LTR12_	LTR/ERV1	1	688	(0)	2202294
1881	14.5	0.0	4.5	chr2	202575862	202576007	(39617522)	C	AluJb	SINE/Alu	(162)	150	11	2202293
15	21.0	3.9	1.9	chr2	206085225	206085275	(36108254)	+	(CCCGG)n	Simple_repeat	1	53	(0)	2207943
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
1946	19.9	1.2	0.0	chr2	207542968	207543299	(34650230)	C	MER2B	DNA/TcMar-Tigger	(0)	336	1	2210203
1954	9.2	0.8	0.0	chr2	207592169	207592418	(34601111)	+	AluSx3	SINE/Alu	44	295	(16)	2210280
880	28.0	12.5	7.8	chr2	207592419	207592638	(34600891)	C	L1MD3	LINE/L1	(4796)	1621	1384	2210268
2216	9.7	2.4	0.3	chr2	207592639	207592927	(34600602)	+	AluSc	SINE/Alu	1	295	(14)	2210281
199	24.1	13.2	1.2	chr2	207710691	207710770	(34482759)	+	MIR	SINE/MIR	169	259	(3)	2210550
1506	21.1	8.8	3.2	chr2	216179020	216179459	(26014070)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2222301
1333	25.0	15.1	2.7	chr2	216179460	216180129	(26013400)	C	L2a	LINE/L2	(187)	3239	2461	2222300
1878	18.4	6.1	3.5	chr2	216904019	216904497	(25289032)	C	L1MCa	LINE/L1	(4920)	1831	1340	2223620
1794	26.7	6.5	6.0	chr2	216904497	216905300	(25288229)	C	L1MCa	LINE/L1	(5218)	827	1	2223620
13	25.0	5.3	3.8	chr2	218292381	218292456	(23901073)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	2225782
13	15.9	0.0	0.0	chr2	218292519	218292546	(23900983)	+	G-rich	Low_complexity	1	28	(0)	2225783
10838	8.8	5.3	3.3	chr2	219200448	219201991	(22991538)	C	LTR12C	LTR/ERV1	(0)	1579	3	2227518
228	43.6	2.1	1.4	chr2	220814688	220814829	(21378700)	+	MIR1_Amn	SINE/MIR	5	147	(83)	2230109
624	19.7	3.2	0.0	chr2	233303116	233303267	(8890262)	C	Charlie18a	DNA/hAT-Charlie	(149)	193	37	2250286
2027	12.4	2.6	4.1	chr2	233303520	233303833	(8889696)	C	AluSx	SINE/Alu	(3)	309	1	2250290
1659	27.8	4.7	3.7	chr2	236547440	236548517	(5645012)	C	L1MEd	LINE/L1	(5364)	1722	398	2255159
922	29.2	10.7	2.8	chr2	237101055	237101487	(5092042)	+	L1MEg	LINE/L1	223	693	(5759)	2255950
1196	22.6	11.8	3.9	chr2	237101556	237101992	(5091537)	+	L1MEg	LINE/L1	2342	2817	(4733)	2255950
2592	26.9	8.3	5.1	chr2	237907023	237908410	(4285119)	C	L1MCc	LINE/L1	(4716)	2321	748	2257027
349	18.5	17.1	0.0	chr2	241411973	241412064	(781465)	+	L1MC4	LINE/L1	7625	7735	(307)	2261118
247	12.1	0.0	0.0	chr2	241412141	241412173	(781356)	C	THE1B	LTR/ERVL-MaLR	(0)	355	323	2261119
1340	14.9	1.4	0.5	chr2	241412176	241412384	(781145)	C	THE1B	LTR/ERVL-MaLR	(153)	211	1	2261119
352	20.0	9.6	0.0	chr2	241412385	241412469	(781060)	+	L1MC4	LINE/L1	7809	7902	(140)	2261118
255	21.1	0.0	0.0	chr2	241412475	241412526	(781003)	+	L1MC4	LINE/L1	7990	8041	(1)	2261118
438	23.4	6.8	4.9	chr20	1265906	1266049	(63178118)	C	MIRc	SINE/MIR	(38)	230	84	2264708
12	18.3	5.4	0.0	chr20	1266254	1266290	(63177877)	+	(CCCT)n	Simple_repeat	1	39	(0)	2264709
12	25.5	3.8	1.8	chr20	1266459	1266511	(63177656)	+	G-rich	Low_complexity	1	55	(0)	2264710
5734	20.9	7.3	1.7	chr20	2219010	2220709	(62223458)	C	L1MDa	LINE/L1	(4111)	2522	722	2266516
1628	25.0	7.9	5.9	chr20	5712438	5713179	(58730988)	C	L1MEg	LINE/L1	(4472)	1612	858	2273109
2256	10.3	0.0	0.0	chr20	11801972	11802252	(52641915)	+	AluSx3	SINE/Alu	1	281	(30)	2282510
1257	25.5	6.1	0.7	chr20	13765945	13766379	(50677788)	+	L1MEd	LINE/L1	906	1365	(5721)	2285370
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
583	30.8	5.0	3.3	chr20	31700029	31700243	(32743924)	+	L2a	LINE/L2	3208	3426	(0)	2306660
12	24.9	2.7	6.5	chr20	33180759	33180833	(31263334)	+	(CTGAGC)n	Simple_repeat	1	77	(0)	2310120
3168	25.4	5.0	7.1	chr20	33890019	33891058	(30553109)	C	L1MCa	LINE/L1	(4385)	2743	1695	2311840
2174	11.7	0.7	0.0	chr20	36282512	36282820	(28161347)	C	AluSz	SINE/Alu	(1)	311	1	2317264
1611	26.3	8.2	2.8	chr20	36282826	36283463	(28160704)	C	L1MEd	LINE/L1	(5794)	1292	618	2317265
228	37.6	2.7	2.7	chr20	37524790	37524901	(26919266)	+	MIR3	SINE/MIR	18	129	(79)	2320188
5338	21.2	4.5	4.2	chr20	41198296	41199702	(23244465)	C	L1M4	LINE/L1	(5440)	2077	609	2327143
2274	27.0	6.6	5.5	chr20	46660153	46661270	(17782897)	C	L1MEf	LINE/L1	(4524)	2513	1232	2338152
763	19.9	0.4	0.6	chr20	48516181	48516442	(15927725)	+	D20S16	Satellite	13096	13453	(6)	2342240
254	27.6	6.0	8.4	chr20	48516332	48516485	(15927682)	+	MLT2B4	LTR/ERVL	282	431	(125)	2342258
15	10.4	0.0	5.7	chr20	54208321	54208355	(10235812)	+	G-rich	Low_complexity	1	35	(0)	2355265
300	20.1	10.8	1.6	chr20	54208551	54208675	(10235492)	C	MIR3	SINE/MIR	(69)	139	16	2355260
570	28.2	6.2	5.3	chr20	63340706	63340797	(1103370)	+	L1ME2	LINE/L1	5774	5856	(308)	2369499
5318	7.7	4.7	0.3	chr20	63340798	63341527	(1102640)	+	MER4E	LTR/ERV1	3	766	(0)	2369500
2469	7.8	0.0	0.0	chr20	63718785	63719080	(725087)	+	AluY	SINE/Alu	1	296	(15)	2369928
4434	22.7	3.5	6.8	chr20	63719081	63719725	(724442)	C	L1M4	LINE/L1	(5658)	1962	1327	2369909
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1376	6.8	0.0	0.0	chr21	10405143	10405305	(36304678)	+	AluSq4	SINE/Alu	1	163	(148)	2375495
25	18.6	7.6	0.0	chr21	10405379	10405457	(36304526)	+	(CCCCAAT)n	Simple_repeat	1	85	(0)	2375496
15	18.4	4.7	0.0	chr21	10405422	10405464	(36304519)	+	(ATCCGCG)n	Simple_repeat	1	45	(0)	2375497
2522	4.3	0.0	0.0	chr21	16172932	16173250	(30536733)	C	AluY	SINE/Alu	(0)	311	1	2380091
13271	14.2	4.9	3.8	chr21	16173251	16173488	(30536495)	C	Tigger1	DNA/TcMar-Tigger	(1773)	645	429	2380089
2011	12.5	0.0	5.2	chr21	16173489	16173793	(30536190)	C	AluSx	SINE/Alu	(21)	291	3	2380092
504	17.2	0.0	1.1	chr21	17454673	17454759	(29255224)	C	AluSp	SINE/Alu	(13)	300	215	2381627
591	4.0	0.0	0.0	chr21	17454786	17454859	(29255124)	C	tRNA-Gly-GGY	tRNA	(0)	74	1	2381628
2289	11.4	0.0	0.0	chr21	31351786	31352082	(15357901)	+	AluSx	SINE/Alu	1	297	(15)	2401158
1748	21.9	11.0	4.8	chr21	32716363	32716963	(13993020)	C	L1MEc	LINE/L1	(705)	2047	1019	2403655
2328	10.2	0.3	0.0	chr21	32716964	32717258	(13992725)	C	AluSx1	SINE/Alu	(16)	296	1	2403656
1614	12.2	14.8	0.4	chr21	33325596	33326018	(13383965)	C	LTR34	LTR/ERV1	(13)	686	2	2404728
5148	8.0	3.5	6.6	chr21	36306965	36307383	(10402600)	C	MER4E1	LTR/ERV1	(347)	434	18	2409579
2064	10.5	4.7	0.3	chr21	36307384	36307668	(10402315)	+	AluSx	SINE/Alu	2	299	(13)	2409582
1128	23.0	12.2	1.2	chr21	36680724	36681123	(10028860)	+	MLT1C	LTR/ERVL-MaLR	18	467	(0)	2410325
514	21.5	5.9	4.6	chr21	36681124	36681274	(10028709)	+	L1MEg	LINE/L1	426	578	(5664)	2410324
795	22.5	8.0	2.7	chr21	36681286	36681545	(10028438)	+	L1MEg	LINE/L1	1106	1380	(4862)	2410324
529	15.3	3.3	4.8	chr21	36681549	36681625	(10028358)	C	L1MA9	LINE/L1	(1)	6311	6235	2410326
2099	11.9	5.0	6.0	chr21	36681626	36682010	(10027973)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2410327
2021	27.1	8.9	7.6	chr21	37502174	37503434	(9206549)	C	L1MEf	LINE/L1	(3983)	3054	1747	2411692
772	18.6	3.1	6.0	chr21	41678981	41679180	(5030803)	+	MLT1H	LTR/ERVL-MaLR	1	194	(355)	2417845
189	28.6	10.6	4.5	chr21	41679215	41679302	(5030681)	C	MIRb	SINE/MIR	(143)	125	32	2417846
935	31.0	7.6	3.5	chr21	41840637	41841595	(4868388)	+	L1MEd	LINE/L1	716	1716	(5387)	2418057
11037	12.5	7.3	1.6	chr21	44798204	44800265	(1909718)	C	Tigger1	DNA/TcMar-Tigger	(195)	2223	2	2422169
1078	23.4	9.4	1.0	chr21	44800322	44800632	(1909351)	+	MER2	DNA/TcMar-Tigger	6	345	(0)	2422170
1558	24.0	11.2	7.1	chr21	46515859	46516484	(193499)	C	L1ME3A	LINE/L1	(565)	3105	2123	2424080
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
995	20.1	4.6	0.0	chr22	19104044	19104252	(31714216)	C	Charlie1	DNA/hAT-Charlie	(2562)	219	1	2431448
3569	23.6	9.6	4.9	chr22	21890199	21891019	(28927449)	+	L1MB4	LINE/L1	1071	1895	(4751)	2436143
899	10.9	1.5	0.0	chr22	21891020	21891147	(28927321)	C	AluYj4	SINE/Alu	(10)	301	172	2436149
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
643	1.3	0.0	0.0	chr22	24024198	24024275	(26794193)	C	L1PA2	LINE/L1	(3)	6152	6075	2439389
1719	16.3	1.4	6.2	chr22	24024276	24024419	(26794049)	C	L1MB4	LINE/L1	(975)	5171	5033	2439387
2475	24.6	6.7	4.0	chr22	24024415	24025326	(26793142)	C	L1MC4a	LINE/L1	(5740)	1777	839	2439365
13	23.2	0.0	4.4	chr22	27212578	27212622	(23605846)	+	A-rich	Low_complexity	1	45	(0)	2446213
2568	20.0	6.2	3.5	chr22	27959873	27960562	(22857906)	+	L1MB4	LINE/L1	4862	6017	(163)	2447797
1358	20.0	10.3	9.9	chr22	27960563	27961027	(22857441)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2447807
1386	20.9	4.5	0.0	chr22	30391005	30391319	(20427149)	C	ERVL-E-int	LTR/ERVL	(1161)	4506	4177	2452502
1957	15.2	0.7	0.7	chr22	30794915	30795210	(20023258)	C	AluJb	SINE/Alu	(16)	296	1	2453423
900	20.2	28.1	3.3	chr22	30795211	30795518	(20022950)	C	L1MEg	LINE/L1	(4861)	1554	1172	2453421
1928	26.5	6.8	4.5	chr22	32292619	32294329	(18524139)	C	L1MEg	LINE/L1	(3321)	2825	1006	2456706
1533	18.0	4.0	2.5	chr22	32294332	32294655	(18523813)	C	L1MD1	LINE/L1	(0)	6242	5914	2456711
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
241	30.7	1.5	6.5	chr22	36388623	36388760	(14429708)	+	L2c	LINE/L2	3011	3138	(237)	2464884
1091	15.2	2.5	5.7	chr22	36897350	36897558	(13920910)	+	MSTB	LTR/ERVL-MaLR	1	202	(224)	2466083
952	18.7	4.9	4.5	chr22	36897562	36897785	(13920683)	+	MST-int	LTR/ERVL-MaLR	1169	1393	(258)	2466086
1296	15.3	0.9	0.0	chr22	36897772	36897980	(13920488)	+	MSTB	LTR/ERVL-MaLR	216	426	(0)	2466083
2465	8.0	0.0	0.0	chr22	37737381	37737680	(13080788)	+	AluY	SINE/Alu	2	301	(10)	2467947
429	37.7	8.1	3.0	chr22	37737751	37738078	(13080390)	+	L2b	LINE/L2	3028	3373	(2)	2467948
1013	9.3	20.9	0.0	chr22	38481839	38482020	(12336448)	C	MER30	DNA/hAT-Charlie	(0)	230	1	2469603
2682	23.0	5.8	6.0	chr22	38808974	38810184	(12008284)	C	L1MEg	LINE/L1	(3640)	2506	1206	2470308
1866	9.9	0.0	0.0	chr22	38810196	38810428	(12008040)	+	AluSx1	SINE/Alu	72	304	(8)	2470318
3033	7.9	2.5	2.3	chr22	39112465	39112815	(11705653)	C	MER4E1	LTR/ERV1	(419)	362	1	2470900
2407	8.6	0.3	4.3	chr22	42013091	42013416	(8805052)	+	AluSp	SINE/Alu	1	313	(0)	2477258
7066	21.3	5.3	7.1	chr22	42013417	42013619	(8804849)	C	L1M4	LINE/L1	(5696)	1821	1602	2477252
1852	14.6	1.4	4.0	chr22	42013620	42013777	(8804691)	C	AluJb	SINE/Alu	(18)	294	142	2477259
2141	12.3	0.0	1.0	chr22	42013778	42014077	(8804391)	C	AluSx	SINE/Alu	(11)	301	5	2477260
10156	12.6	3.2	4.3	chr22	42677881	42679477	(8138991)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2478658
241	29.7	3.5	0.3	chr22	43090153	43090243	(7728225)	C	MIRb	SINE/MIR	(154)	114	13	2479548
180	33.6	8.7	0.0	chr22	43090374	43090489	(7727979)	+	MIRc	SINE/MIR	17	143	(125)	2479559
1699	14.6	1.7	6.7	chr22	43090576	43090891	(7727577)	+	AluJr	SINE/Alu	13	312	(0)	2479560
2194	22.3	3.2	2.3	chr22	49991153	49991632	(826836)	+	L1M4	LINE/L1	1372	1857	(5660)	2490032
587	17.7	2.0	0.7	chr22	49991633	49991780	(826688)	+	L1M4	LINE/L1	2087	2236	(5281)	2490032
713	22.4	6.8	2.7	chr22	50124815	50125039	(693429)	C	L1MEc	LINE/L1	(6131)	269	35	2490222
4422	11.5	2.5	4.6	chr3	4305386	4305816	(193989743)	C	MER4E	LTR/ERV1	(338)	428	1	2498777
289	30.4	0.0	5.1	chr3	4305817	4305857	(193989702)	+	MIRc	SINE/MIR	229	268	(0)	2498776
365	22.8	2.5	0.0	chr3	13891826	13891904	(184403655)	+	MLT1J	LTR/ERVL-MaLR	99	179	(333)	2516108
17	10.6	2.2	6.4	chr3	13932944	13932989	(184362570)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	2516157
9340	17.4	4.5	2.9	chr3	14219534	14222103	(184073456)	C	L1MB5	LINE/L1	(850)	5821	1585	2516488
34	0.0	5.6	0.0	chr3	14222104	14222139	(184073420)	+	(TC)n	Simple_repeat	1	38	(0)	2516492
9340	19.6	6.6	2.2	chr3	14222140	14223636	(184071923)	C	L1MB5	LINE/L1	(5933)	1584	12	2516488
12	16.9	5.9	0.0	chr3	14503255	14503288	(183792271)	+	(TGCA)n	Simple_repeat	1	36	(0)	2517071
1552	21.6	0.0	1.8	chr3	20189525	20189807	(178105752)	C	AluJr	SINE/Alu	(32)	280	3	2525831
16	12.8	2.8	2.7	chr3	20189819	20189854	(178105705)	+	(ATT)n	Simple_repeat	1	37	(0)	2525832
21	14.8	0.0	0.0	chr3	24526769	24526807	(173768752)	+	(TATATA)n	Simple_repeat	1	39	(0)	2532026
196	32.5	0.0	6.1	chr3	24683602	24683683	(173611876)	C	MIR3	SINE/MIR	(78)	130	54	2532246
15	19.6	8.2	1.5	chr3	29280643	29280703	(169014856)	+	(CCTT)n	Simple_repeat	1	66	(0)	2538963
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
49	27.8	0.0	0.0	chr3	29281115	29281236	(169014323)	+	(TTTT)n	Simple_repeat	1	122	(0)	2538965
26	14.1	2.9	4.3	chr3	33114562	33114629	(165180930)	+	(GCCCCG)n	Simple_repeat	1	70	(0)	2545325
278	30.2	8.0	0.8	chr3	33114709	33114835	(165180724)	+	MIRb	SINE/MIR	132	268	(0)	2545326
3746	14.0	5.9	6.9	chr3	33677818	33678697	(164616862)	+	L1MC1	LINE/L1	909	1778	(4730)	2546246
1486	27.8	8.4	3.6	chr3	33698381	33699559	(164596000)	+	L1MCc	LINE/L1	839	2292	(4745)	2546284
1451	18.5	8.1	0.7	chr3	33699562	33699860	(164595699)	C	MER44A	DNA/TcMar-Tigger	(1)	338	16	2546285
2026	14.1	0.0	4.5	chr3	33711247	33711558	(164584001)	C	AluSx	SINE/Alu	(13)	299	2	2546304
1306	27.4	3.5	5.2	chr3	33711559	33711635	(164583924)	C	L2	LINE/L2	(2199)	1220	1157	2546303
5746	9.0	4.0	1.3	chr3	33711637	33712502	(164583057)	+	L1PB2	LINE/L1	5254	6144	(7)	2546305
1234	25.4	3.4	13.2	chr3	38385632	38386148	(159909411)	C	L1MC4a	LINE/L1	(934)	6948	6484	2552976
2139	22.8	7.0	5.7	chr3	38386828	38387355	(159908204)	C	L1MEg	LINE/L1	(4637)	1778	1244	2552975
10271	10.9	5.6	1.1	chr3	38432574	38433892	(159861667)	C	THE1C-int	LTR/ERVL-MaLR	(183)	1397	1	2553043
2172	12.0	0.7	0.0	chr3	42071430	42071721	(156223838)	+	AluSq2	SINE/Alu	5	298	(15)	2558499
1912	26.1	6.0	4.0	chr3	45561630	45562402	(152733157)	C	L1MEf	LINE/L1	(4390)	3160	2376	2564045
3279	18.9	1.5	3.6	chr3	45562413	45563096	(152732463)	C	L1MD2	LINE/L1	(44)	6315	5645	2564047
4824	21.6	13.0	4.3	chr3	45729385	45731251	(152564308)	C	L1MB4	LINE/L1	(4578)	2430	266	2564349
1175	26.1	9.3	12.7	chr3	45863037	45864041	(152431518)	+	L1MC5a	LINE/L1	1633	2599	(178)	2564566
398	20.6	3.8	2.7	chr3	47266697	47266822	(151028737)	C	MIRb	SINE/MIR	(15)	253	135	2566801
290	30.6	3.6	1.8	chr3	49856122	49856231	(148439328)	+	L2b	LINE/L2	3082	3193	(182)	2572118
6689	9.2	1.2	0.4	chr3	51019461	51021188	(147274371)	C	L1PA11	LINE/L1	(1)	6173	4433	2573847
2565	8.4	0.0	0.0	chr3	61513857	61514153	(136781406)	+	AluY	SINE/Alu	1	297	(14)	2590716
557	24.5	11.1	3.7	chr3	63973006	63973196	(134322363)	C	MIRb	SINE/MIR	(40)	228	22	2594976
986	28.1	2.6	0.7	chr3	69302471	69302775	(128992784)	+	L1ME4b	LINE/L1	216	526	(366)	2603891
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
22	14.6	0.0	4.1	chr3	87226914	87226962	(111068597)	+	(AAC)n	Simple_repeat	1	49	(0)	2629278
18	9.8	3.0	0.0	chr3	87227477	87227509	(111068050)	+	(GGGCC)n	Simple_repeat	1	34	(0)	2629279
399	33.8	3.2	0.7	chr3	97698639	97698790	(100596769)	+	MIRc	SINE/MIR	2	157	(111)	2638130
196	29.7	1.6	0.0	chr3	97698811	97698896	(100596663)	+	L2c	LINE/L2	3298	3413	(13)	2638131
309	28.4	4.7	0.0	chr3	97698920	97699000	(100596559)	C	MIRc	SINE/MIR	(107)	161	77	2638132
737	28.5	5.0	1.8	chr3	99976520	99976851	(98318708)	C	L1MCa	LINE/L1	(4904)	2224	1882	2640985
449	32.8	0.0	0.5	chr3	99976864	99977053	(98318506)	C	L1MCa	LINE/L1	(5976)	447	259	2640985
235	21.7	0.0	0.0	chr3	101179562	101179607	(97115952)	C	MER94B	DNA/hAT-Blackjack	(87)	46	1	2642681
180	21.1	21.1	1.1	chr3	101780725	101780815	(96514744)	+	L2a	LINE/L2	3233	3346	(80)	2643596
22	10.0	4.7	0.0	chr3	113838845	113838887	(84456672)	+	(GGTGC)n	Simple_repeat	1	45	(0)	2659865
16	23.3	1.9	1.9	chr3	115146880	115146931	(83148628)	+	(TCCC)n	Simple_repeat	1	53	(0)	2661717
29	0.0	0.0	3.1	chr3	115146983	115147014	(83148545)	+	(GGGGC)n	Simple_repeat	1	32	(0)	2661718
13	30.1	0.0	2.0	chr3	115147076	115147126	(83148433)	+	(CCCCA)n	Simple_repeat	1	51	(0)	2661719
3964	26.2	8.4	7.1	chr3	119775741	119776750	(78518809)	+	L1M4	LINE/L1	749	1853	(5664)	2668155
911	16.9	3.8	6.8	chr3	119776754	119776944	(78518615)	+	L1MB4	LINE/L1	5441	5625	(555)	2668157
395	19.4	0.0	0.0	chr3	123028393	123028459	(75267100)	+	MIRb	SINE/MIR	113	179	(89)	2673003
16	14.6	0.0	6.8	chr3	123961449	123961492	(74334067)	+	G-rich	Low_complexity	1	44	(0)	2674568
3272	21.1	6.8	2.6	chr3	130947270	130948658	(67346901)	C	L1MB8	LINE/L1	(4917)	2600	1549	2686211
5844	15.0	2.5	0.6	chr3	130948670	130949621	(67345938)	+	Tigger1	DNA/TcMar-Tigger	24	993	(1425)	2686212
1545	23.6	2.6	0.3	chr3	136280657	136280952	(62014607)	C	AluJr4	SINE/Alu	(8)	304	2	2694106
5688	23.5	7.5	5.9	chr3	136280953	136282381	(62013178)	C	L1M4	LINE/L1	(5640)	1877	295	2694102
10750	15.4	5.1	8.3	chr3	136290007	136290530	(62005029)	C	L1MCa	LINE/L1	(3520)	1944	1390	2694116
792	18.8	0.8	0.8	chr3	136290531	136290658	(62004901)	C	FLAM_A	SINE/Alu	(14)	128	1	2694121
10750	17.1	6.0	6.7	chr3	136290659	136291136	(62004423)	C	L1MCa	LINE/L1	(5119)	1389	930	2694116
1552	24.4	4.5	2.0	chr3	138559030	138559451	(59736108)	+	L1MEg	LINE/L1	806	1326	(4874)	2697717
1946	15.4	2.6	0.0	chr3	138559452	138559750	(59735809)	+	AluSz	SINE/Alu	2	308	(4)	2697720
15	12.6	3.7	0.0	chr3	138573181	138573207	(59722352)	+	(AC)n	Simple_repeat	1	28	(0)	2697733
424	22.8	2.2	5.2	chr3	138573236	138573389	(59722170)	+	L1MEg	LINE/L1	1537	1807	(5794)	2697734
899	26.5	9.3	4.6	chr3	138573429	138573931	(59721628)	+	L1MEg	LINE/L1	1981	2509	(4231)	2697734
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
2437	5.8	0.3	0.0	chr3	142225760	142226051	(56069508)	C	AluSg	SINE/Alu	(16)	294	2	2703769
2024	14.0	0.7	3.2	chr3	142554640	142554953	(55740606)	+	AluJr	SINE/Alu	1	306	(6)	2704296
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
236	30.6	12.7	0.7	chr3	152289189	152289326	(46006233)	+	L1ME3G	LINE/L1	444	600	(324)	2717993
15	19.7	0.0	0.0	chr3	157152043	157152071	(41143488)	+	A-rich	Low_complexity	1	29	(0)	2725054
937	14.7	2.8	9.6	chr3	158018195	158018467	(40277092)	C	MLT1B	LTR/ERVL-MaLR	(52)	338	1	2726268
361	35.1	1.9	1.9	chr3	158018559	158018715	(40276844)	C	MIRb	SINE/MIR	(28)	240	84	2726269
401	21.6	0.0	0.0	chr3	158018737	158018810	(40276749)	+	Tigger5b	DNA/TcMar-Tigger	399	472	(0)	2726270
18729	12.2	3.1	0.6	chr3	176877036	176882287	(21413272)	+	L1PREC2	LINE/L1	1081	6474	(1667)	2752233
12	21.7	0.0	0.0	chr3	177617446	177617477	(20678082)	+	(AATATG)n	Simple_repeat	1	32	(0)	2753555
1063	21.7	5.7	2.9	chr4	2856192	2856544	(187358011)	C	L1MEd	LINE/L1	(5558)	1718	1363	2792329
2265	12.8	0.3	0.0	chr4	2856585	2856890	(187357665)	C	AluSx	SINE/Alu	(5)	307	1	2792339
4370	24.6	6.5	6.2	chr4	40777899	40778363	(149436192)	+	L1MB7	LINE/L1	865	1324	(4918)	2852825
1985	17.3	3.6	0.6	chr4	40778364	40778712	(149435843)	+	MLT1A0	LTR/ERVL-MaLR	3	362	(3)	2852828
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
3836	24.3	9.3	4.6	chr4	53858309	53859087	(136355468)	C	L1MEg	LINE/L1	(4068)	3265	2417	2868329
1947	15.8	0.0	3.2	chr4	53859088	53859397	(136355158)	C	AluJr	SINE/Alu	(12)	300	1	2868330
3836	27.0	12.1	4.2	chr4	53859398	53860491	(136354064)	C	L1MEg	LINE/L1	(4917)	2416	1744	2868329
1597	26.4	11.7	4.0	chr4	54159104	54159863	(136054692)	C	L1MEg	LINE/L1	(4224)	2813	1951	2868837
1850	22.4	1.8	5.9	chr4	54159864	54159913	(136054642)	+	MSTD	LTR/ERVL-MaLR	4	51	(345)	2868843
2262	15.4	0.0	0.0	chr4	54159914	54160218	(136054337)	+	AluSg	SINE/Alu	1	305	(5)	2868844
14	16.2	4.7	2.2	chr4	55546253	55546295	(134668260)	+	(CCGCC)n	Simple_repeat	1	45	(0)	2871090
20	10.7	0.0	0.0	chr4	63600091	63600120	(126614435)	+	(TG)n	Simple_repeat	1	30	(0)	2882182
525	28.2	8.0	3.6	chr4	63600129	63600633	(126613922)	C	L1MEf	LINE/L1	(4992)	1423	913	2882181
2743	25.6	12.2	4.7	chr4	75505680	75507832	(114706723)	+	L1MEg	LINE/L1	159	2492	(3654)	2897543
8865	14.6	4.7	3.5	chr4	76240141	76241768	(113972787)	C	L1MB3	LINE/L1	(4730)	1654	6	2898945
16728	10.8	1.4	3.4	chr4	79343818	79346062	(110868493)	C	L1MA2	LINE/L1	(2)	7721	5526	2903499
2763	17.9	12.4	5.4	chr4	85796543	85797155	(104417400)	C	LTR41	LTR/ERVL	(1)	767	101	2913002
2502	4.6	0.3	0.3	chr4	85797156	85797472	(104417083)	C	AluY	SINE/Alu	(0)	311	1	2913003
702	27.2	7.8	7.0	chr4	86928188	86928585	(103285970)	C	LTR33A_	LTR/ERVL	(100)	431	7	2914636
226	21.8	1.8	0.0	chr4	89434402	89434456	(100780099)	+	L2b	LINE/L2	3320	3375	(0)	2918644
762	21.6	0.0	1.8	chr4	92092078	92092242	(98122313)	C	MER5A1	DNA/hAT-Charlie	(0)	166	5	2921866
1630	30.0	14.7	1.5	chr4	92092243	92092910	(98121645)	+	L2a	LINE/L2	1461	2217	(1202)	2921862
936	25.9	6.6	4.5	chr4	93380041	93380464	(96834091)	+	MLT1C	LTR/ERVL-MaLR	24	460	(7)	2923566
1867	17.6	4.2	9.9	chr4	102404577	102405012	(87809543)	C	MLT2D	LTR/ERVL	(4)	410	1	2935626
40	19.1	4.2	3.2	chr4	111464728	111464758	(78749797)	+	A-rich	Low_complexity	1	33	(0)	2947854
1638	15.3	1.1	3.2	chr4	111464759	111465039	(78749516)	+	AluSz	SINE/Alu	38	312	(0)	2947855
40	18.5	0.8	6.9	chr4	111465040	111465141	(78749414)	+	A-rich	Low_complexity	24	120	(0)	2947856
236	24.6	0.0	0.0	chr4	112297079	112297139	(77917416)	C	Charlie2b	DNA/hAT-Charlie	(2147)	635	575	2948996
3601	24.4	4.7	1.7	chr4	124191811	124192844	(66021711)	+	L1M4	LINE/L1	670	1735	(5782)	2964984
258	12.8	0.0	0.0	chr4	124192842	124192880	(66021675)	C	L1M4	LINE/L1	(615)	5569	5531	2964985
6244	13.4	2.9	0.8	chr4	124192881	124193880	(66020675)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1397	2964986
1713	20.4	6.0	2.1	chr4	124433511	124433945	(65780610)	+	MLT1C	LTR/ERVL-MaLR	7	459	(8)	2965266
600	30.0	3.1	7.7	chr4	129199024	129199359	(61015196)	C	HAL1	LINE/L1	(2186)	321	2	2971869
377	38.4	3.5	5.8	chr4	129199430	129199963	(61014592)	+	L2	LINE/L2	2257	2777	(642)	2971875
1781	15.5	4.9	2.1	chr4	138099276	138099610	(52114945)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	2982468
12	16.8	0.0	5.4	chr4	141220665	141220701	(48993854)	+	(TTCCTT)n	Simple_repeat	1	37	(0)	2987428
1764	18.0	0.0	0.0	chr4	141442540	141442817	(48771738)	C	AluSz6	SINE/Alu	(32)	280	3	2987680
1012	26.5	7.9	4.0	chr4	144399960	144400433	(45814122)	+	MLT1H	LTR/ERVL-MaLR	13	547	(2)	2991550
610	28.5	7.7	3.6	chr4	147453466	147453774	(42760781)	+	HAL1ME	LINE/L1	75	397	(2068)	2995615
233	25.6	8.2	0.0	chr4	147453814	147453891	(42760664)	+	HAL1ME	LINE/L1	482	566	(1899)	2995615
30	0.0	0.0	0.0	chr4	147453902	147453927	(42760628)	+	(CA)n	Simple_repeat	1	26	(0)	2995616
2335	10.4	0.3	0.0	chr4	153288156	153288452	(36926103)	+	AluSx	SINE/Alu	2	299	(13)	3004379
6304	18.8	6.4	5.3	chr4	153288453	153289420	(36925135)	C	L1MB7	LINE/L1	(5713)	1804	847	3004371
272	33.7	1.0	0.0	chr4	155425349	155425446	(34789109)	C	MLT1M	LTR/ERVL-MaLR	(462)	210	112	3007403
4579	26.2	10.6	11.6	chr4	156732193	156733488	(33481067)	+	L1MDa	LINE/L1	1005	2397	(4236)	3009180
6800	24.3	7.3	3.9	chr4	166633379	166637026	(23577529)	C	L1MCa	LINE/L1	(2614)	3950	1	3022598
4503	18.4	1.0	2.2	chr4	168436236	168437127	(21777428)	+	ERVL-B4-int	LTR/ERVL	4313	5193	(521)	3024806
1275	20.3	2.0	4.8	chr4	168437130	168437445	(21777110)	+	MLT1C	LTR/ERVL-MaLR	6	312	(155)	3024807
1421	17.4	2.4	2.8	chr4	168437449	168437738	(21776817)	+	MER49	LTR/ERV1	1	289	(634)	3024808
1922	19.3	5.2	0.5	chr4	180989348	180989790	(9224765)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	3041486
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
9787	17.3	6.2	3.6	chr5	450272	453302	(181084957)	C	L1M4c	LINE/L1	(3229)	3153	25	3055435
2879	26.4	4.8	1.4	chr5	949690	951555	(180586704)	C	L1MC3	LINE/L1	(4915)	1130	223	3055822
240	13.5	0.0	0.0	chr5	1571119	1571155	(179967104)	C	MER1B	DNA/hAT-Charlie	(210)	129	93	3056370
709	20.3	2.5	0.0	chr5	1571245	1571402	(179966857)	C	MER1B	DNA/hAT-Charlie	(360)	169	1	3056371
1510	21.6	8.4	4.7	chr5	14000024	14000470	(167537789)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	3071592
711	9.6	1.7	1.7	chr5	14000473	14000589	(167537670)	C	L1PA16	LINE/L1	(747)	5419	5303	3071593
1581	16.6	0.3	9.4	chr5	17156301	17156633	(164381626)	C	AluJo	SINE/Alu	(0)	312	1	3076342
13311	14.8	2.7	0.4	chr5	27072312	27076473	(154461786)	+	L1PA14	LINE/L1	64	5160	(2981)	3089391
10138	14.4	1.2	0.4	chr5	27157173	27158791	(154379468)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3089506
2095	24.1	8.1	9.4	chr5	33264496	33265420	(148272839)	+	L1MEg	LINE/L1	1005	1985	(4257)	3098075
2143	15.1	18.2	0.2	chr5	43007613	43008023	(138530236)	+	MER61D	LTR/ERV1	1	501	(0)	3112396
2652	1.1	0.0	0.0	chr5	53798189	53798503	(127739756)	C	AluY	SINE/Alu	(0)	311	2	3120742
4223	20.5	6.5	1.1	chr5	55715096	55716277	(125821982)	+	L1M4	LINE/L1	991	2240	(5277)	3123754
2039	27.6	5.9	5.5	chr5	56632148	56633623	(124904636)	+	L1MCc	LINE/L1	859	2433	(4695)	3125325
3664	9.5	13.7	3.5	chr5	58445834	58446454	(123091805)	C	LTR12	LTR/ERV1	(132)	694	1	3128124
16044	10.8	2.4	3.1	chr5	65676341	65679340	(115858919)	+	L1PA11	LINE/L1	2587	5674	(685)	3138224
254	30.9	5.1	3.1	chr5	67593434	67593547	(113944712)	C	L2a	LINE/L2	(32)	3394	3264	3141039
33	11.2	8.7	0.0	chr5	67593566	67593634	(113944625)	+	(TG)n	Simple_repeat	1	75	(0)	3141040
462	36.1	7.0	2.1	chr5	67593639	67593837	(113944422)	C	L2a	LINE/L2	(294)	3081	2879	3141039
2430	9.6	0.0	0.6	chr5	67593838	67594149	(113944110)	+	AluSz	SINE/Alu	2	311	(1)	3141041
1060	26.4	6.0	9.2	chr5	69461889	69462069	(112076190)	C	Charlie20a	DNA/hAT-Charlie	(589)	218	50	3144096
18	14.7	2.6	0.0	chr5	69462318	69462355	(112075904)	+	(ATTT)n	Simple_repeat	1	39	(0)	3144101
3316	22.1	10.6	4.4	chr5	79719859	79720428	(101817831)	+	L1MEg	LINE/L1	1063	1696	(4719)	3160277
590	31.9	9.2	5.8	chr5	80479705	80480641	(101057618)	+	L1MEg	LINE/L1	213	1184	(4900)	3161638
1534	16.5	8.6	0.4	chr5	80480643	80480921	(101057338)	+	AluJo	SINE/Alu	1	304	(8)	3161639
2037	11.9	0.0	2.1	chr5	81769822	81770106	(99768153)	+	AluSz6	SINE/Alu	1	279	(33)	3163591
25	20.3	0.0	0.0	chr5	91101769	91101816	(90436443)	+	(AC)n	Simple_repeat	1	48	(0)	3175636
14	21.5	7.6	1.4	chr5	98773829	98773866	(82764393)	+	(CGCTGCG)n	Simple_repeat	1	80	(25)	3185540
14	17.2	3.9	5.7	chr5	98773867	98773917	(82764342)	+	(GCT)n	Simple_repeat	1	53	(0)	3185541
14	21.5	7.6	1.4	chr5	98773918	98773927	(82764332)	+	(CGCTGCG)n	Simple_repeat	81	105	(0)	3185540
1969	16.6	0.0	0.0	chr5	102411276	102411564	(79126695)	C	AluJb	SINE/Alu	(23)	289	1	3190108
5274	8.6	0.6	5.2	chr5	102411580	102412398	(79125861)	+	MER4E1	LTR/ERV1	1	781	(0)	3190109
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
212	28.8	1.5	2.9	chr5	112215006	112215073	(69323186)	+	L2a	LINE/L2	3348	3414	(12)	3202453
22166	9.2	3.1	1.4	chr5	113568356	113570075	(67968184)	C	L1PA11	LINE/L1	(1)	6358	4599	3204484
1774	23.8	7.2	6.2	chr5	125045595	125045642	(56492617)	C	L1MC5	LINE/L1	(159)	9145	9101	3219546
1615	18.3	6.1	0.9	chr5	125045643	125045968	(56492291)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	3219548
1774	23.8	7.2	6.2	chr5	125045969	125046730	(56491529)	C	L1MC5	LINE/L1	(204)	9100	8326	3219546
2166	23.5	10.0	8.6	chr5	131824570	131824904	(49713355)	+	L1MEd	LINE/L1	1095	1477	(5799)	3228603
1595	19.7	0.0	4.7	chr5	131824905	131825203	(49713056)	+	AluJr	SINE/Alu	2	286	(26)	3228604
1031	3.3	0.0	0.0	chr5	132130936	132131057	(49407202)	C	L1PA7	LINE/L1	(5)	6149	6028	3228938
295	22.8	1.2	0.0	chr5	132131076	132131154	(49407105)	+	L1MEc	LINE/L1	2005	2084	(4953)	3228933
646	14.8	13.6	0.0	chr5	132131167	132131274	(49406985)	+	FLAM_C	SINE/Alu	5	129	(14)	3228939
24	15.8	4.1	0.0	chr5	132131275	132131323	(49406936)	+	(TA)n	Simple_repeat	1	51	(0)	3228940
1853	27.6	13.2	10.2	chr5	132621312	132622155	(48916104)	C	L1ME3F	LINE/L1	(5194)	1909	967	3229662
4789	19.4	5.6	1.0	chr5	134982070	134983320	(46554939)	+	L1PB3	LINE/L1	1476	2787	(4833)	3233721
1208	22.9	7.6	0.3	chr5	135887063	135887416	(45650843)	C	Charlie1b	DNA/hAT-Charlie	(87)	436	55	3234906
17	0.0	0.0	0.0	chr5	135887453	135887471	(45650788)	+	(TG)n	Simple_repeat	1	19	(0)	3234907
13	31.3	0.0	0.0	chr5	135887471	135887513	(45650746)	+	(TACATA)n	Simple_repeat	1	43	(0)	3234908
4390	19.1	3.7	5.6	chr5	138817000	138817882	(42720377)	C	L1MA5	LINE/L1	(969)	6352	6147	3239667
9510	12.0	1.5	13.1	chr5	139549171	139550957	(41987302)	+	LTR12C	LTR/ERV1	3	1579	(0)	3241018
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
2539	6.3	0.0	0.0	chr5	146210667	146210966	(35327293)	+	AluY	SINE/Alu	2	301	(10)	3252114
894	14.8	4.9	13.3	chr5	146210967	146210989	(35327270)	+	MLT1A0	LTR/ERVL-MaLR	308	316	(49)	3252113
1869	15.8	0.0	2.6	chr5	146210990	146211293	(35326966)	+	AluJb	SINE/Alu	1	296	(16)	3252115
3161	10.8	1.8	0.8	chr5	148374206	148374691	(33163568)	C	L1MA3	LINE/L1	(7)	6298	5808	3255780
1595	19.1	4.0	2.8	chr5	151434627	151434950	(30103309)	+	MLT1A0	LTR/ERVL-MaLR	38	365	(0)	3261864
1189	25.6	15.0	6.5	chr5	151434957	151435860	(30102399)	+	L1MEg	LINE/L1	1171	2164	(4078)	3261863
6658	14.1	8.4	6.3	chr5	157591612	157592374	(23945885)	C	L1MC1	LINE/L1	(4863)	1645	905	3272981
2194	17.7	1.9	2.4	chr5	164119721	164120137	(17418122)	C	MER61C	LTR/ERV1	(0)	428	14	3283579
264	22.0	0.0	0.0	chr5	164120105	164120154	(17418105)	C	LTR28	LTR/ERV1	(958)	62	13	3283580
856	22.8	5.5	8.3	chr5	164120146	164120542	(17417717)	C	MLT1A	LTR/ERVL-MaLR	(16)	374	1	3283581
1760	20.5	9.2	10.9	chr5	168513703	168514426	(13023833)	C	L1ME3	LINE/L1	(4467)	1775	1066	3290211
953	27.9	18.1	1.9	chr5	170345973	170346392	(11191867)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	3293428
208	37.8	3.4	1.7	chr5	170346436	170346610	(11191649)	C	L2a	LINE/L2	(755)	2664	2487	3293425
347	33.1	4.2	0.6	chr5	170822592	170822752	(10715507)	+	L2a	LINE/L2	3260	3426	(0)	3294352
636	27.0	4.9	0.0	chr5	170822823	170822996	(10715263)	+	MIR	SINE/MIR	31	213	(49)	3294353
386	28.6	17.2	1.5	chr5	171630455	171630649	(9907610)	+	MIRb	SINE/MIR	21	252	(16)	3295716
1152	26.4	9.2	9.0	chr5	172759647	172760616	(8777643)	+	L1MEg	LINE/L1	149	1401	(4683)	3298139
325	32.7	5.2	0.0	chr5	174328691	174328800	(7209459)	+	MIRc	SINE/MIR	115	230	(38)	3301296
13	25.5	0.0	0.0	chr5	174329226	174329263	(7208996)	+	G-rich	Low_complexity	1	38	(0)	3301297
2044	14.7	0.3	1.3	chr5	174784801	174785107	(6753152)	C	AluSx	SINE/Alu	(0)	312	9	3302233
286	14.8	1.0	0.0	chr5	174785108	174785160	(6753099)	C	FLAM_C	SINE/Alu	(94)	39	1	3302234
7598	19.6	4.8	7.5	chr5	174785161	174786464	(6751795)	C	L1MB5	LINE/L1	(5594)	1923	636	3302228
458	21.4	0.0	0.0	chr5	174820457	174820545	(6717714)	C	L1MB5	LINE/L1	(340)	5834	5746	3302310
660	31.0	10.4	1.5	chr5	174820547	174821100	(6717159)	+	L2a	LINE/L2	2795	3426	(0)	3302311
416	33.0	5.8	2.2	chr5	178474657	178474839	(3063420)	C	L2a	LINE/L2	(4)	3422	3233	3309236
1802	19.4	3.1	3.3	chr5	178474850	178475271	(3062988)	C	MLT1C	LTR/ERVL-MaLR	(46)	421	1	3309237
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
775	25.9	11.2	5.2	chr5	180378967	180379370	(1158889)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	24	3312519
2646	8.1	2.2	0.0	chr6	1690199	1690555	(169115424)	C	L1PA10	LINE/L1	(966)	5180	4816	3316471
6643	8.1	0.9	0.3	chr6	1690555	1691527	(169114452)	+	L1PA10	LINE/L1	5187	6168	(0)	3316471
5561	20.4	8.4	1.8	chr6	4110355	4112978	(166693001)	C	L1MB4	LINE/L1	(1454)	5652	1659	3319977
22846	6.1	1.6	1.7	chr6	10913448	10913835	(159892144)	C	L1PBa1	LINE/L1	(718)	6149	5762	3330435
262	30.7	7.3	5.2	chr6	11401532	11401665	(159404314)	C	MER5A1	DNA/hAT-Charlie	(18)	148	12	3331169
7767	13.9	2.1	3.0	chr6	11401814	11403127	(159402852)	C	LTR12E	LTR/ERV1	(2)	1320	19	3331170
4552	26.6	5.3	4.4	chr6	11509931	11511425	(159294554)	+	L1MEf	LINE/L1	85	1603	(4639)	3331321
298	32.0	6.0	1.9	chr6	12649123	12649318	(158156661)	+	L1ME3G	LINE/L1	488	665	(259)	3332978
1247	22.8	6.0	0.3	chr6	12649389	12649718	(158156261)	C	L1MEg	LINE/L1	(4838)	1246	897	3332983
918	30.1	4.3	5.2	chr6	12649727	12650665	(158155314)	+	HAL1	LINE/L1	246	1260	(1161)	3332984
208	29.4	16.6	0.7	chr6	15960948	15961084	(154844895)	C	L3	LINE/CR1	(1353)	2746	2584	3338755
232	31.2	8.8	0.0	chr6	15961086	15961178	(154844801)	C	MLT2F	LTR/ERVL	(0)	563	462	3338763
644	25.2	12.8	1.4	chr6	15961299	15961580	(154844399)	C	MLT2F	LTR/ERVL	(319)	344	26	3338763
247	28.3	1.1	0.0	chr6	17986695	17986786	(152819193)	+	MIR3	SINE/MIR	93	185	(23)	3342183
16	10.4	0.0	5.7	chr6	17987184	17987218	(152818761)	+	(CCGC)n	Simple_repeat	1	35	(0)	3342184
4731	22.2	3.7	2.7	chr6	18047986	18049480	(152756499)	+	L1MCb	LINE/L1	1	1602	(5149)	3342322
2186	12.3	1.9	0.0	chr6	18049503	18049803	(152756176)	+	AluSx	SINE/Alu	2	308	(4)	3342323
1531	22.8	7.9	5.3	chr6	19832466	19832847	(150973132)	+	L1M4	LINE/L1	4612	5027	(1119)	3344995
934	21.8	3.4	0.0	chr6	19832848	19833017	(150972962)	C	MER45A	DNA/hAT-Tip100	(1)	177	2	3344996
636	2.8	0.0	0.0	chr6	28941601	28941672	(141864307)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3359511
6917	20.4	2.5	2.4	chr6	33122935	33123947	(137682032)	C	HUERS-P3-int	LTR/ERV1	(5651)	1767	750	3365864
1492	17.9	0.7	6.6	chr6	33123957	33124261	(137681718)	C	HUERS-P3-int	LTR/ERV1	(6876)	542	256	3365864
1904	15.8	0.3	5.6	chr6	36042477	36042799	(134763180)	C	AluJo	SINE/Alu	(5)	307	2	3371704
1872	15.8	0.0	4.0	chr6	36042845	36043141	(134762838)	+	AluJb	SINE/Alu	14	298	(14)	3371705
2104	21.4	12.7	1.2	chr6	37953750	37955142	(132850837)	C	L1MEc	LINE/L1	(496)	2256	292	3375675
10040	12.0	3.4	1.1	chr6	38525438	38526993	(132278986)	+	THE1D-int	LTR/ERVL-MaLR	4	1599	(32)	3376526
13	21.1	0.0	2.5	chr6	43229142	43229181	(127576798)	+	G-rich	Low_complexity	1	40	(0)	3384956
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
3840	16.4	4.8	2.9	chr6	43229934	43230576	(127575403)	C	LTR62	LTR/ERVL	(0)	709	42	3384958
564	22.6	3.4	6.7	chr6	43702343	43702522	(127103457)	+	MER5B	DNA/hAT-Charlie	5	178	(0)	3385854
47	4.2	0.0	0.0	chr6	43702713	43702761	(127103218)	+	(TG)n	Simple_repeat	1	49	(0)	3385855
2598	25.0	6.6	3.8	chr6	44582091	44583283	(126222696)	C	L1MEd	LINE/L1	(3780)	2434	1182	3387447
269	28.3	2.9	3.9	chr6	44583374	44583476	(126222503)	+	L2c	LINE/L2	3248	3349	(38)	3387448
4604	23.3	8.8	3.5	chr6	46154658	46158263	(124647716)	C	L1MD1	LINE/L1	(2633)	3904	139	3389751
9605	7.9	1.1	1.0	chr6	57042899	57044714	(113761265)	+	L1PB1	LINE/L1	3977	5788	(363)	3405045
3138	17.8	13.4	4.2	chr6	57164893	57165438	(113640541)	C	L1M4	LINE/L1	(5434)	2083	1457	3405228
26	0.0	0.0	0.0	chr6	57165439	57165463	(113640516)	+	(TGAT)n	Simple_repeat	1	25	(0)	3405229
3138	17.8	13.4	4.2	chr6	57165464	57165731	(113640248)	C	L1M4	LINE/L1	(6061)	1456	1182	3405228
9182	6.8	9.1	10.6	chr6	66949034	66950638	(103855341)	+	LTR12C	LTR/ERV1	2	1579	(0)	3414912
4249	26.8	7.2	3.8	chr6	75534200	75534751	(95271228)	+	L1MEf	LINE/L1	1435	1997	(4418)	3426343
4748	15.2	1.0	1.5	chr6	75534752	75535259	(95270720)	C	MER44C	DNA/TcMar-Tigger	(0)	733	230	3426346
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
13	11.2	4.5	6.5	chr6	99520982	99521025	(71284954)	+	(GCCGGAG)n	Simple_repeat	1	46	(0)	3457774
17	13.2	0.0	2.9	chr6	99521007	99521041	(71284938)	+	GA-rich	Low_complexity	1	35	(0)	3457775
209	21.1	3.4	1.7	chr6	99521599	99521656	(71284323)	C	MIR3	SINE/MIR	(60)	148	90	3457776
1884	15.1	1.0	2.5	chr6	99521851	99522167	(71283812)	C	AluJr	SINE/Alu	(0)	312	1	3457777
247	24.2	1.6	1.6	chr6	99588556	99588618	(71217361)	C	L2a	LINE/L2	(16)	3410	3348	3457916
5251	19.1	4.8	2.9	chr6	99708121	99709853	(71096126)	C	L1MB2	LINE/L1	(3785)	3156	1328	3458038
465	22.6	2.5	7.7	chr6	100271212	100271362	(70534617)	C	L2a	LINE/L2	(56)	3370	3222	3458800
571	25.4	0.0	0.8	chr6	100271363	100271484	(70534495)	+	AluJr	SINE/Alu	5	125	(187)	3458801
465	22.6	2.5	7.7	chr6	100271485	100271500	(70534479)	C	L2a	LINE/L2	(205)	3221	3212	3458800
19	14.8	4.3	2.0	chr6	104969433	104969479	(65836500)	+	(AAC)n	Simple_repeat	1	49	(0)	3464718
306	28.9	2.0	0.0	chr6	106326124	106326220	(64479759)	C	MIRc	SINE/MIR	(37)	231	133	3466727
1232	24.3	7.7	1.7	chr6	110089144	110089696	(60716283)	+	L1MEg	LINE/L1	824	1351	(884)	3473155
4578	23.7	7.1	1.0	chr6	110089702	110091040	(60714939)	+	L1MEg	LINE/L1	3448	4881	(1265)	3473155
309	31.7	3.2	2.9	chr6	111342231	111342386	(59463593)	+	L1ME2	LINE/L1	655	866	(5557)	3475446
2584	6.0	0.0	0.0	chr6	111342387	111342684	(59463295)	+	AluY	SINE/Alu	1	298	(13)	3475447
11199	12.0	0.4	0.7	chr6	112967244	112968876	(57837103)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	1	3477801
268	26.9	2.5	0.0	chr6	117823105	117823182	(52982797)	+	LTR79	LTR/ERVL	8	87	(440)	3484372
779	31.2	5.0	3.0	chr6	117823254	117823646	(52982333)	+	LTR79	LTR/ERVL	126	526	(1)	3484372
3696	8.2	1.4	0.5	chr6	119046832	119047522	(51758457)	+	L1MA1	LINE/L1	5089	5785	(517)	3486038
10405	16.3	0.5	6.5	chr6	119047520	119049166	(51756813)	+	L1PREC2	LINE/L1	3281	4782	(1364)	3486039
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
3320	21.7	12.2	6.1	chr6	124978209	124979211	(45826768)	C	LTR27E	LTR/ERV1	(4)	1073	1	3493661
10319	12.4	2.8	1.2	chr6	126382244	126384277	(44421702)	+	L1PREC2	LINE/L1	1565	3634	(3132)	3495594
1767	18.1	1.0	2.7	chr6	128615959	128616256	(42189723)	C	AluJr	SINE/Alu	(19)	293	1	3498408
12692	15.5	3.2	3.8	chr6	128616257	128617321	(42188658)	C	L1MB2	LINE/L1	(4709)	1675	595	3498397
1653	8.8	6.0	0.4	chr6	128621317	128621567	(42184412)	C	L1PA11	LINE/L1	(0)	6174	5909	3498419
1444	8.7	0.0	0.5	chr6	128621569	128621776	(42184203)	+	L1P3	LINE/L1	4850	5056	(1090)	3498420
1692	17.4	4.9	2.3	chr6	131366960	131367258	(39438721)	+	AluJo	SINE/Alu	1	307	(5)	3502216
3981	25.9	3.2	2.7	chr6	131517483	131520946	(39285033)	C	L1PA15-16	LINE/L1	(3217)	3695	344	3502467
586	29.0	7.4	5.8	chr6	133030589	133031203	(37774776)	C	L1M5	LINE/L1	(1321)	4825	4201	3504695
354	27.2	3.7	0.0	chr6	133031241	133031343	(37774636)	+	MLT1H2	LTR/ERVL-MaLR	89	195	(294)	3504697
316	32.4	3.9	5.9	chr6	133031562	133032108	(37773871)	C	ERV3-16A3_I-int	LTR/ERVL	(4228)	998	487	3504698
21500	11.4	1.1	1.1	chr6	133860216	133866048	(36939931)	C	L1PA14	LINE/L1	(782)	7359	1499	3505791
7585	18.2	2.9	2.9	chr6	135645963	135647532	(35158447)	+	L1MCa	LINE/L1	5	1575	(4933)	3508740
1839	15.5	0.3	3.7	chr6	136705309	136705605	(34100374)	C	AluJr	SINE/Alu	(25)	287	1	3510311
410	31.5	5.2	0.0	chr6	136840535	136840680	(33965299)	C	L2a	LINE/L2	(569)	2850	2697	3510569
774	30.9	13.0	1.3	chr6	136840764	136841143	(33964836)	+	L2a	LINE/L2	2996	3426	(0)	3510571
2807	29.7	9.1	5.8	chr6	139849521	139851277	(30954702)	C	HAL1	LINE/L1	(2)	2505	685	3515307
290	29.2	2.2	0.0	chr6	142669953	142670041	(28135938)	C	MamRep137	DNA/TcMar?	(1)	509	419	3518815
394	35.9	2.3	1.2	chr6	142670101	142670272	(28135707)	C	MamRep137	DNA/TcMar?	(310)	200	27	3518815
13	32.8	0.0	0.0	chr6	147203730	147203779	(23602200)	+	(GCC)n	Simple_repeat	1	50	(0)	3525091
1134	27.1	9.2	3.3	chr6	149008878	149009533	(21796446)	+	HAL1ME	LINE/L1	754	1500	(965)	3527789
27	8.1	0.0	2.4	chr6	149009561	149009601	(21796378)	+	(AC)n	Simple_repeat	1	41	(0)	3527790
976	26.2	6.4	5.4	chr6	149855095	149855610	(20950369)	+	PABL_B	LTR/ERV1	1	667	(0)	3529304
1621	17.1	0.7	7.1	chr6	154760796	154761104	(16044875)	C	AluJr	SINE/Alu	(22)	290	2	3537008
4099	10.8	2.1	5.5	chr6	156359412	156360045	(14445934)	+	LTR9	LTR/ERV1	1	612	(0)	3539341
1355	25.5	7.9	5.0	chr6	156360046	156360352	(14445627)	+	MER70A	LTR/ERVL	162	472	(0)	3539340
2194	26.6	8.9	6.8	chr6	157389498	157391097	(13414882)	C	L1MEf	LINE/L1	(4120)	2917	1129	3540836
3232	26.9	6.2	8.7	chr6	159333090	159334551	(11471428)	+	L1MCc	LINE/L1	668	2308	(4729)	3543953
21312	10.3	3.4	3.0	chr6	161121592	161124979	(9681000)	C	L1PB1	LINE/L1	(360)	6507	3050	3546236
15	13.2	2.9	2.8	chr6	162727299	162727333	(8078646)	+	(GGC)n	Simple_repeat	1	36	(0)	3548581
2336	9.7	0.0	5.3	chr6	163439331	163439649	(7366330)	C	AluSx1	SINE/Alu	(6)	306	5	3549453
2216	13.7	2.0	0.0	chr6	163439657	163439949	(7366030)	C	AluSz6	SINE/Alu	(13)	299	1	3549454
1247	29.8	6.3	5.0	chr6	165004984	165006658	(5799321)	C	L1MCc	LINE/L1	(4084)	2953	1026	3551440
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
434	24.2	10.1	5.7	chr6	170078246	170078490	(727489)	+	Charlie10	DNA/hAT-Charlie	2554	2810	(12)	3557124
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
2540	6.3	0.0	0.0	chr7	316348	316649	(159029324)	C	AluY	SINE/Alu	(9)	302	1	3558185
989	29.2	14.1	9.7	chr7	316650	317657	(159028316)	C	L1MEd	LINE/L1	(5791)	1295	240	3558184
3393	26.7	6.5	2.7	chr7	686609	687813	(158658160)	+	L1MEg	LINE/L1	1	1253	(4831)	3558719
2368	10.8	0.0	0.0	chr7	687814	688119	(158657854)	+	AluSx1	SINE/Alu	1	306	(6)	3558720
1333	22.0	5.4	2.7	chr7	2749670	2750080	(156595893)	+	L1MEf	LINE/L1	865	1287	(4955)	3561932
245	17.8	0.0	0.0	chr7	2750091	2750135	(156595838)	+	L1MEf	LINE/L1	2858	2902	(3244)	3561932
785	21.1	1.6	3.5	chr7	2750142	2750338	(156595635)	+	L1MCa	LINE/L1	10	202	(6306)	3561934
2000	11.0	7.5	0.0	chr7	2768931	2769203	(156576770)	C	AluSz	SINE/Alu	(17)	295	1	3561967
722	30.6	10.4	6.8	chr7	2769204	2769448	(156576525)	C	L1ME3G	LINE/L1	(316)	608	333	3561966
2469	8.6	0.0	1.0	chr7	2769449	2769762	(156576211)	+	AluY	SINE/Alu	1	311	(0)	3561968
722	30.6	10.4	6.8	chr7	2769763	2769928	(156576045)	C	L1ME3G	LINE/L1	(592)	332	169	3561966
2409	7.6	0.0	0.3	chr7	6373948	6374249	(152971724)	C	AluSq2	SINE/Alu	(7)	306	6	3569227
17	27.8	2.4	3.5	chr7	6374414	6374496	(152971477)	+	G-rich	Low_complexity	1	85	(0)	3569228
25	27.2	1.9	3.6	chr7	6374618	6374631	(152971342)	+	(GCCCCGC)n	Simple_repeat	1	105	(0)	3569229
21	17.1	5.6	6.4	chr7	6374632	6374720	(152971253)	+	(CGC)n	Simple_repeat	1	94	(0)	3569230
2370	16.8	2.1	2.9	chr7	16914227	16914704	(142431269)	C	L1MA4	LINE/L1	(6)	6294	5821	3583196
542	24.8	10.7	1.3	chr7	23414632	23414813	(135931160)	+	LTR50	LTR/ERVL	24	216	(304)	3592290
306	29.4	8.1	1.7	chr7	23415665	23415837	(135930136)	+	LTR50	LTR/ERVL	476	660	(135)	3592290
4089	10.1	3.7	0.2	chr7	30413624	30414196	(128931777)	+	LTR27B	LTR/ERV1	1	594	(0)	3603107
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
1150	27.1	15.0	3.4	chr7	33782662	33783222	(125562751)	+	MLT2F	LTR/ERVL	26	663	(0)	3608383
2433	9.2	0.3	0.0	chr7	33783474	33783777	(125562196)	C	AluY	SINE/Alu	(6)	305	1	3608384
1546	19.0	4.0	0.7	chr7	37820666	37821079	(121524894)	C	L1MEc	LINE/L1	(4802)	1598	1171	3614286
18	17.0	1.7	6.6	chr7	37821081	37821140	(121524833)	+	(ATTTTTT)n	Simple_repeat	1	61	(0)	3614287
1394	6.3	0.5	1.0	chr7	38888929	38889120	(120456853)	+	L1PA7	LINE/L1	5964	6154	(0)	3615764
3723	20.5	4.0	4.5	chr7	38889124	38889539	(120456434)	+	L1MDa	LINE/L1	1487	1910	(4723)	3615762
1811	15.5	3.2	0.3	chr7	40106877	40107180	(119238793)	C	MER2	DNA/TcMar-Tigger	(5)	340	28	3617800
502	12.3	1.2	9.0	chr7	40107200	40107288	(119238685)	+	Tigger3d	DNA/TcMar-Tigger	1	82	(239)	3617801
2539	6.2	0.0	0.7	chr7	40531669	40531973	(118814000)	C	AluY	SINE/Alu	(8)	303	1	3618600
18	20.7	0.0	0.0	chr7	40531974	40531987	(118813986)	+	(AT)n	Simple_repeat	2	15	(0)	3618601
12296	14.8	2.3	9.3	chr7	43577035	43579639	(115766334)	C	Tigger1	DNA/TcMar-Tigger	(1)	2417	1	3622828
6307	20.2	9.6	8.7	chr7	45059766	45061445	(114284528)	C	L1MCa	LINE/L1	(4379)	2129	458	3625432
254	14.8	0.0	10.3	chr7	54806465	54806532	(104539441)	+	MER115	DNA/hAT-Tip100	573	633	(60)	3637831
643	30.1	11.1	1.4	chr7	54806565	54806978	(104538995)	C	L2	LINE/L2	(741)	2678	2220	3637832
968	25.9	10.9	3.0	chr7	55437329	55437897	(103908076)	C	L1MEj	LINE/L1	(1155)	1352	783	3638648
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
22	13.8	0.0	0.0	chr7	82443816	82443855	(76902118)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	3680896
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
2152	18.6	5.2	2.9	chr7	98330685	98331028	(61014945)	C	MSTB	LTR/ERVL-MaLR	(64)	362	1	3702334
4002	18.3	7.3	2.2	chr7	98331029	98331463	(61014510)	+	L1MCa	LINE/L1	1237	1691	(5060)	3702333
2328	10.5	0.3	0.3	chr7	98331464	98331768	(61014205)	C	AluSq2	SINE/Alu	(8)	305	1	3702336
6443	21.1	6.1	3.9	chr7	98506340	98507028	(60838945)	+	L1MD2	LINE/L1	1313	2045	(4588)	3702763
11511	16.8	2.2	3.6	chr7	103012393	103014193	(56331780)	+	L1PA15	LINE/L1	2251	4013	(2660)	3712078
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
2557	18.3	7.3	8.1	chr7	106085016	106085270	(53260703)	+	L1ME3Cz	LINE/L1	1446	1677	(4956)	3717073
1507	27.7	8.6	1.3	chr7	106100590	106101264	(53244709)	+	L2a	LINE/L2	2601	3350	(76)	3717098
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
5411	10.8	2.4	4.6	chr7	111488190	111489036	(47856937)	C	L1PB1	LINE/L1	(1)	6150	5331	3724394
2405	7.1	0.0	0.0	chr7	111489037	111489342	(47856631)	C	AluY	SINE/Alu	(0)	311	1	3724395
27	0.0	0.0	0.0	chr7	114678548	114678573	(44667400)	+	(T)n	Simple_repeat	1	26	(0)	3728678
2187	30.2	10.4	2.7	chr7	116471296	116473111	(42872862)	C	L1MEc	LINE/L1	(4375)	2025	53	3731087
5190	10.8	2.5	0.7	chr7	123422808	123423819	(35922154)	+	L1PBa	LINE/L1	932	2105	(4758)	3740411
286	21.9	1.5	0.0	chr7	123423817	123423880	(35922093)	+	L1MCc	LINE/L1	2020	2084	(4953)	3740406
48	31.7	1.6	3.1	chr7	123423930	123424122	(35921851)	+	(TA)n	Simple_repeat	1	196	(0)	3740412
1959	28.2	7.7	3.5	chr7	128586268	128587145	(30758828)	C	L1MEg	LINE/L1	(4297)	1945	1007	3747580
2150	10.7	0.3	2.9	chr7	137952808	137953116	(21392857)	C	AluSx1	SINE/Alu	(11)	301	1	3762643
245	28.2	22.0	0.0	chr7	137953230	137953339	(21392634)	+	MamGypsy2-LTR	LTR/Gypsy	43	183	(0)	3762644
1401	24.1	3.7	2.2	chr7	138069841	138070243	(21275730)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	59	3762830
3378	14.2	1.1	16.6	chr7	138295437	138295655	(21050318)	C	L1MA9	LINE/L1	(690)	6912	6730	3763309
2100	13.5	1.0	0.0	chr7	138295656	138295951	(21050022)	+	AluSx	SINE/Alu	1	299	(13)	3763315
1715	22.8	5.4	0.2	chr7	139118775	139119192	(20226781)	+	MLT1F	LTR/ERVL-MaLR	1	441	(107)	3764957
367	23.0	16.9	0.0	chr7	139119278	139119390	(20226583)	C	MIRb	SINE/MIR	(97)	171	36	3764958
4192	12.0	6.9	1.2	chr7	140672105	140672755	(18673218)	C	LTR8	LTR/ERV1	(0)	691	1	3767990
27	15.7	3.4	6.5	chr7	140673118	140673206	(18672767)	+	(GCGCG)n	Simple_repeat	1	92	(0)	3767991
5846	8.8	0.8	0.8	chr7	141561093	141561647	(17784326)	C	L1PB2	LINE/L1	(319)	5832	5273	3769487
704	25.4	1.1	0.6	chr7	141561647	141561824	(17784149)	C	L1PBb	LINE/L1	(6015)	189	11	3769489
5702	16.7	0.9	0.1	chr7	141561800	141562832	(17783141)	C	L1PBa	LINE/L1	(5224)	1639	599	3769490
1851	20.3	1.4	0.8	chr7	147783605	147783967	(11562006)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3777753
2353	18.9	3.9	1.8	chr7	147783968	147784295	(11561678)	C	MLT1C	LTR/ERVL-MaLR	(123)	344	1	3777752
5598	9.2	6.0	4.1	chr7	149466728	149467609	(9878364)	C	MER4D1	LTR/ERV1	(0)	900	1	3780744
3837	26.0	8.8	7.9	chr7	149467610	149468531	(9877442)	C	L1MEd	LINE/L1	(5799)	1304	420	3780742
3144	19.0	4.7	4.5	chr7	152365910	152366731	(6979242)	+	L1MB2	LINE/L1	5304	6127	(44)	3784953
1024	20.8	7.4	5.3	chr7	152495562	152495745	(6850228)	+	L1MEc	LINE/L1	1124	1321	(5079)	3785275
1897	17.6	0.7	1.3	chr7	152495746	152496052	(6849921)	+	AluJb	SINE/Alu	6	310	(2)	3785277
1024	20.8	7.4	5.3	chr7	152496053	152496278	(6849695)	+	L1MEc	LINE/L1	1322	1543	(4857)	3785275
1786	16.3	0.0	4.2	chr7	152960645	152960957	(6385016)	+	AluJr	SINE/Alu	12	311	(1)	3786267
1201	26.8	10.6	3.0	chr7	152960958	152961286	(6384687)	+	L1MCc	LINE/L1	1911	2253	(4784)	3786264
269	22.5	12.3	0.0	chr7	152961291	152961361	(6384612)	+	MLT1B	LTR/ERVL-MaLR	1	81	(309)	3786268
1588	24.9	7.9	1.6	chr7	152961364	152961949	(6384024)	+	L1MCc	LINE/L1	2450	3094	(3847)	3786264
2609	28.8	11.4	4.2	chr7	155648707	155650201	(3695772)	C	L1M4	LINE/L1	(5477)	2040	425	3789940
240	20.0	3.5	0.0	chr7	156736292	156736346	(2609627)	C	L1MEd	LINE/L1	(4918)	2185	2129	3791275
29	27.7	1.6	3.9	chr7	157337247	157337372	(2008601)	+	G-rich	Low_complexity	1	128	(0)	3792328
3725	9.0	4.4	0.0	chr7	157376905	157377272	(1968701)	C	MER4E1	LTR/ERV1	(187)	594	215	3792409
653	4.7	1.2	3.4	chr7	157377262	157377349	(1968624)	C	MER4E1	LTR/ERV1	(680)	86	1	3792409
16	0.0	3.9	3.7	chr7	158151565	158151590	(1194383)	+	(GTG)n	Simple_repeat	1	27	(0)	3793030
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1103	30.6	12.3	3.4	chr8	6574532	6574956	(138563680)	+	L1MEd	LINE/L1	829	1287	(5799)	3802264
1291	20.4	10.0	3.8	chr8	8469530	8469895	(136668741)	+	MLT1D	LTR/ERVL-MaLR	113	503	(2)	3804775
748	19.4	0.8	0.0	chr8	8469946	8470074	(136668562)	C	FLAM_C	SINE/Alu	(13)	130	1	3804779
2512	8.7	0.0	0.0	chr8	15536400	15536711	(129601925)	+	AluSx1	SINE/Alu	1	312	(0)	3815544
502	31.6	10.6	2.8	chr8	15536712	15536781	(129601855)	C	L2a	LINE/L2	(657)	2762	2696	3815542
5234	6.5	3.8	2.3	chr8	15536792	15537544	(129601092)	+	MER4E	LTR/ERV1	1	765	(1)	3815545
11	24.9	0.0	2.5	chr8	23246999	23247038	(121891598)	+	(GGCGCG)n	Simple_repeat	1	40	(0)	3827599
183	29.4	5.2	1.1	chr8	23247039	23247131	(121891505)	+	L2b	LINE/L2	3263	3359	(16)	3827600
32	7.1	1.5	4.5	chr8	37785124	37785188	(107353448)	+	(ACAGAT)n	Simple_repeat	1	66	(0)	3850962
1969	13.6	0.3	3.2	chr8	42089594	42089903	(103048733)	+	AluSx1	SINE/Alu	1	301	(11)	3858114
541	27.6	6.4	7.5	chr8	42089904	42090087	(103048549)	+	L1MEd	LINE/L1	1112	1292	(5794)	3858112
4634	9.1	0.4	13.1	chr8	49024591	49025378	(96113258)	+	LTR12_	LTR/ERV1	1	688	(0)	3863947
19492	12.3	4.8	1.1	chr8	52066161	52071229	(93067407)	C	L1PB1	LINE/L1	(1564)	5298	1	3867674
435	19.4	4.0	9.4	chr8	53889758	53889822	(91248814)	C	L1ME3	LINE/L1	(908)	6546	6481	3870074
1615	25.3	6.9	2.2	chr8	53889804	53890640	(91247996)	C	L1ME3	LINE/L1	(4757)	2793	1937	3870074
2353	30.3	10.3	2.5	chr8	54609508	54610805	(90527831)	+	L2a	LINE/L2	1322	2732	(687)	3871339
7154	19.5	6.7	4.2	chr8	54610806	54611887	(90526749)	C	L1M4c	LINE/L1	(4107)	4048	2461	3871340
22	24.3	1.9	0.0	chr8	55748547	55748598	(89390038)	+	GA-rich	Low_complexity	1	53	(0)	3872816
1688	17.3	6.1	0.0	chr8	55748613	55748889	(89389747)	C	AluSz	SINE/Alu	(16)	296	2	3872817
475	27.1	1.3	4.3	chr8	55748917	55749078	(89389558)	+	MIRb	SINE/MIR	53	209	(59)	3872818
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
4522	16.2	2.0	1.9	chr8	57435675	57436934	(87701702)	C	L1MB7	LINE/L1	(8)	6176	4901	3875313
322	30.1	3.7	10.7	chr8	64477753	64478091	(80660545)	+	L1ME4a	LINE/L1	5807	6124	(0)	3884512
225	31.4	3.8	1.0	chr8	64478552	64478576	(80660060)	C	SVA_A	Retroposon/SVA	(1026)	361	256	3884514
377	28.2	0.0	0.0	chr8	64478577	64478654	(80659982)	+	7SLRNA	srpRNA	1	78	(242)	3884515
13	11.3	10.5	0.0	chr8	66613012	66613049	(78525587)	+	(GACCGC)n	Simple_repeat	1	42	(0)	3887699
17	23.1	1.7	3.3	chr8	66613144	66613202	(78525434)	+	(CCCGGC)n	Simple_repeat	1	60	(0)	3887700
2341	9.4	0.3	0.0	chr8	66910528	66910824	(78227812)	+	AluSq2	SINE/Alu	1	298	(15)	3888357
9928	11.8	5.0	1.2	chr8	66910825	66911130	(78227506)	+	THE1D-int	LTR/ERVL-MaLR	1280	1579	(1)	3888356
2255	13.8	4.7	1.1	chr8	66911132	66911497	(78227139)	+	THE1D	LTR/ERVL-MaLR	1	380	(1)	3888356
18466	8.2	1.9	0.8	chr8	70337678	70341107	(74797529)	+	L1PA11	LINE/L1	2714	6174	(0)	3893645
1865	20.6	5.6	1.1	chr8	71530004	71530449	(73608187)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3895342
17972	7.8	1.7	1.4	chr8	73218540	73221751	(71916885)	C	L1PA10	LINE/L1	(5)	6163	2944	3897650
1725	17.8	6.2	0.7	chr8	91035747	91036038	(54102598)	+	AluJb	SINE/Alu	1	309	(3)	3921968
227	27.0	0.0	0.0	chr8	91036142	91036204	(54102432)	+	L2b	LINE/L2	2304	2366	(1053)	3921966
733	31.5	8.4	5.7	chr8	91036242	91036736	(54101900)	+	L2b	LINE/L2	2332	2841	(578)	3921966
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
20202	12.2	1.5	3.8	chr8	103633343	103635297	(41503339)	C	L1PREC2	LINE/L1	(2307)	5834	3912	3942588
20031	12.9	2.5	2.1	chr8	104575154	104577528	(40561108)	+	L1PA13	LINE/L1	1160	3705	(3210)	3943927
233	19.6	0.0	0.0	chr8	105908198	105908243	(39230393)	C	LTR41C	LTR/ERVL	(655)	46	1	3945772
803	25.2	12.7	3.0	chr8	105908323	105908791	(39229845)	+	LTR50	LTR/ERVL	31	644	(151)	3945773
4687	6.9	12.8	0.0	chr8	121823099	121823779	(23314857)	C	MER4E1	LTR/ERV1	(0)	781	1	3968935
57	0.0	0.0	0.0	chr8	121823875	121823923	(23314713)	+	(TA)n	Simple_repeat	1	49	(0)	3968936
2198	11.4	0.4	0.0	chr8	121823927	121824232	(23314404)	C	AluSx1	SINE/Alu	(0)	312	1	3968937
2735	9.6	0.3	0.0	chr8	125139406	125139768	(19998868)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3974998
777	25.2	8.7	3.4	chr8	134767679	134768060	(10370576)	C	L1MEg	LINE/L1	(4765)	2568	2165	3992853
684	25.6	1.6	7.8	chr8	142083929	142084199	(3054437)	+	L1MCa	LINE/L1	1122	1375	(5133)	4004499
455	23.9	2.9	1.0	chr8	142084282	142084488	(3054148)	+	L1MCa	LINE/L1	1429	1703	(4714)	4004499
19897	11.9	1.6	0.8	chr8	143005318	143008279	(2130357)	C	L1PA13	LINE/L1	(2708)	4058	1050	4005570
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
4401	18.2	3.4	12.3	chr8	144030659	144031453	(1107183)	C	L1MB7	LINE/L1	(4983)	2534	1758	4006988
626	12.6	0.0	0.0	chr8	144031454	144031540	(1107096)	C	FLAM_A	SINE/Alu	(8)	134	48	4006997
4401	18.2	3.4	12.3	chr8	144031541	144031710	(1106926)	C	L1MB7	LINE/L1	(4983)	1757	1590	4006988
1998	16.5	1.6	0.7	chr8	144031711	144032019	(1106617)	C	AluJb	SINE/Alu	(0)	312	1	4006998
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
2352	27.8	8.5	0.6	chr8	144741433	144742402	(396234)	+	L1MEf	LINE/L1	625	1677	(4523)	4008022
2810	26.3	9.7	2.7	chr9	1316485	1317020	(137077697)	+	L1MEg	LINE/L1	619	1179	(4905)	4010600
252	25.3	3.1	1.0	chr9	1317018	1317113	(137077604)	C	L1MEg	LINE/L1	(4758)	1326	1229	4010602
1418	25.3	16.6	4.2	chr9	1317132	1318336	(137076381)	+	L1ME3D	LINE/L1	4774	6142	(100)	4010597
5914	15.3	3.9	1.7	chr9	14637612	14639649	(123755068)	+	L1MA4A	LINE/L1	5638	7717	(5)	4029239
3934	22.6	5.5	3.6	chr9	17249648	17251617	(121143100)	C	L1M4	LINE/L1	(3269)	3375	1287	4033095
2062	20.4	15.5	0.9	chr9	18895506	18896429	(119498288)	+	L1ME3A	LINE/L1	486	1981	(5639)	4035258
8026	17.9	3.7	9.9	chr9	18896430	18897895	(119496822)	+	L1PA11	LINE/L1	3	1355	(4998)	4035259
1647	18.0	1.3	2.3	chr9	19173798	19174097	(119220620)	+	AluJo	SINE/Alu	2	298	(14)	4035766
738	16.8	0.0	2.4	chr9	19174119	19174243	(119220474)	+	AluJr	SINE/Alu	180	301	(11)	4035767
83	26.4	0.8	3.5	chr9	19174480	19174734	(119219983)	+	(TTTC)n	Simple_repeat	1	257	(0)	4035768
303	29.8	9.7	0.8	chr9	21443673	21443804	(116950913)	+	MIRb	SINE/MIR	89	233	(35)	4039223
1149	12.8	0.0	0.6	chr9	21443811	21443966	(116950751)	+	AluSx1	SINE/Alu	88	242	(70)	4039224
5564	13.5	1.2	0.2	chr9	21463896	21464913	(116929804)	C	L1PA14	LINE/L1	(3753)	2920	1893	4039245
3191	23.0	7.2	5.1	chr9	25880070	25880924	(112513793)	+	L1MDb	LINE/L1	1000	1848	(4785)	4044937
10797	14.3	9.0	3.5	chr9	26937160	26938227	(111456490)	+	L1M4c	LINE/L1	491	1678	(4706)	4046380
1270	18.4	1.0	14.4	chr9	26938228	26938574	(111456143)	+	AluJr	SINE/Alu	3	302	(10)	4046382
2759	26.4	6.0	4.2	chr9	30314411	30316938	(108077779)	C	L1MCa	LINE/L1	(3082)	3482	704	4051023
506	24.0	1.8	0.9	chr9	33374753	33374878	(105019839)	C	MIR	SINE/MIR	(91)	171	45	4055303
10890	2.4	0.1	13.0	chr9	33600251	33601837	(104792880)	+	SVA_D	Retroposon/SVA	1	1382	(4)	4055727
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
2231	22.8	2.4	1.0	chr9	79846839	79847424	(58547293)	C	L1M4c	LINE/L1	(4603)	2505	1912	4097836
1343	27.1	9.8	2.3	chr9	79847426	79848263	(58546454)	C	L1M4c	LINE/L1	(5334)	1632	366	4097836
20294	15.2	2.5	2.6	chr9	80338217	80340917	(58053800)	+	L1MA4	LINE/L1	13	2736	(4829)	4098489
396	26.9	9.4	2.7	chr9	87634525	87634673	(50760044)	C	MLT1G3	LTR/ERVL-MaLR	(421)	174	15	4109800
272	22.2	2.2	8.2	chr9	87634751	87634848	(50759869)	+	MER63A	DNA/hAT-Blackjack	47	138	(72)	4109801
884	22.0	11.4	3.9	chr9	92195274	92195628	(46199089)	+	L1MEc	LINE/L1	1743	2127	(4960)	4116329
793	15.6	0.8	2.2	chr9	92195629	92195763	(46198954)	+	AluJb	SINE/Alu	1	133	(179)	4116330
323	24.7	7.4	3.2	chr9	92195767	92195848	(46198869)	+	L1MEc	LINE/L1	2118	2211	(4876)	4116329
2107	10.5	5.8	0.0	chr9	92195849	92195971	(46198746)	+	AluSx	SINE/Alu	1	123	(189)	4116331
1519	11.5	0.9	2.3	chr9	94726231	94726447	(43668270)	C	AluJo	SINE/Alu	(15)	297	84	4120189
1941	21.5	4.2	5.6	chr9	95312656	95313117	(43081600)	C	LTR41	LTR/ERVL	(68)	700	223	4121012
3498	19.9	8.0	9.9	chr9	95313470	95314308	(43080409)	+	L1M4	LINE/L1	3483	4355	(1791)	4121014
23	24.9	1.5	0.0	chr9	96655321	96655386	(41739331)	+	G-rich	Low_complexity	1	67	(0)	4123269
5985	21.6	4.4	2.7	chr9	97403292	97404881	(40989836)	C	L1M4	LINE/L1	(5275)	2242	552	4124468
1973	9.6	3.2	3.2	chr9	100198265	100198598	(38196119)	C	AluSp	SINE/Alu	(0)	313	2	4129710
2311	10.7	0.0	0.0	chr9	100198600	100198890	(38195827)	C	AluSc	SINE/Alu	(18)	291	1	4129711
308	28.3	8.2	4.2	chr9	107422592	107422757	(30971960)	C	MIR3	SINE/MIR	(35)	195	19	4140664
297	33.8	17.2	2.7	chr9	111534434	111534510	(26860207)	C	L2c	LINE/L2	(40)	3347	3271	4148057
1762	24.6	4.6	4.0	chr9	111534511	111534718	(26859999)	C	LTR16B2	LTR/ERVL	(4)	458	265	4148058
2461	7.9	0.0	0.0	chr9	111534719	111535021	(26859696)	C	AluSx3	SINE/Alu	(7)	304	2	4148059
1519	21.8	15.5	3.7	chr9	112712076	112712998	(25681719)	+	L1ME2	LINE/L1	728	1793	(4840)	4150350
1141	20.6	7.7	1.9	chr9	112713000	112713410	(25681307)	+	L1ME2	LINE/L1	5572	5953	(602)	4150350
14464	16.6	9.8	8.4	chr9	113924427	113926736	(24467981)	C	L1MCa	LINE/L1	(2875)	3446	890	4152647
1165	14.7	1.5	9.4	chr9	125008435	125008486	(13386231)	C	AluJb	SINE/Alu	(181)	131	86	4173701
1695	22.9	3.5	2.1	chr9	125008500	125009071	(13385646)	+	L1MEg	LINE/L1	931	1510	(4732)	4173695
1347	26.2	5.5	2.4	chr9	125611232	125611934	(12782783)	+	L1ME3E	LINE/L1	910	1357	(5746)	4174971
246	16.0	1.3	10.2	chr9	130765147	130765250	(7629467)	+	Charlie4z	DNA/hAT-Charlie	92	135	(32)	4185756
4077	21.0	12.7	9.1	chr9	130810509	130811202	(7583515)	+	L1MEc	LINE/L1	1049	1818	(4582)	4185847
3975	19.6	6.2	3.7	chr9	134076578	134076952	(4317765)	+	L1MB5	LINE/L1	1370	1743	(5774)	4191495
2368	11.2	0.0	1.0	chr9	134076953	134077266	(4317451)	+	AluSx1	SINE/Alu	1	311	(1)	4191499
1409	26.8	6.5	4.7	chr9	134530361	134530830	(3863887)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	70	4192136
1103	27.3	6.2	3.8	chr9	134530837	134531379	(3863338)	+	L1MEd	LINE/L1	1154	1689	(5397)	4192133
2116	11.3	0.7	1.7	chr9	135475245	135475431	(2919286)	C	AluSq2	SINE/Alu	(0)	313	132	4193287
5336	7.7	1.6	0.4	chr9	135643640	135644396	(2750321)	C	MER4E	LTR/ERV1	(0)	766	1	4193486
1469	30.0	6.0	3.2	chr9	135644397	135644566	(2750151)	C	L1ME4b	LINE/L1	(522)	370	200	4193485
3293	11.7	2.9	6.0	chr9	135644567	135645131	(2749586)	+	LTR10B1	LTR/ERV1	1	547	(0)	4193487
1970	11.6	1.3	1.3	chr9	137963394	137963696	(431021)	C	AluSz	SINE/Alu	(9)	303	1	4196387
14811	14.6	1.2	0.9	chr9	137963697	137965335	(429382)	C	L1PA10	LINE/L1	(4028)	3575	1173	4196386
1201	23.1	3.0	2.7	chrX	3149810	3150107	(152890788)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	169	4364351
891	14.2	0.0	4.7	chrX	3150135	3150282	(152890613)	C	AluJb	SINE/Alu	(171)	141	1	4364352
242	15.9	4.3	2.2	chrX	3150287	3150331	(152890564)	C	MLT1C	LTR/ERVL-MaLR	(215)	175	130	4364351
2039	2.9	0.4	1.2	chrX	9339294	9339533	(146701362)	+	AluY	SINE/Alu	73	310	(1)	4374599
361	26.1	6.0	2.7	chrX	12771377	12771522	(143269373)	+	MamRep1879	DNA/hAT-Tip100?	66	216	(0)	4380077
1364	18.3	11.3	0.4	chrX	12771837	12772104	(143268791)	C	AluJb	SINE/Alu	(10)	302	2	4380078
27	0.0	0.0	0.0	chrX	17406620	17406645	(138634250)	+	(AAAAC)n	Simple_repeat	1	26	(0)	4387793
342	27.7	14.1	7.4	chrX	20128815	20129044	(135911851)	+	L4_A_Mam	LINE/RTE-X	4050	4297	(693)	4392602
1890	24.3	7.2	1.6	chrX	20300810	20301294	(135739601)	C	LTR33	LTR/ERVL	(0)	515	2	4392907
2239	11.8	0.0	0.0	chrX	22394045	22394340	(133646555)	+	AluSx1	SINE/Alu	1	296	(16)	4395960
6054	7.6	0.8	0.6	chrX	22394341	22395277	(133645618)	+	L1PB1	LINE/L1	5192	6128	(23)	4395959
1664	12.5	7.1	1.4	chrX	24144156	24144476	(131896419)	C	AluJb	SINE/Alu	(0)	312	6	4398938
1623	23.2	14.1	16.4	chrX	24144477	24144511	(131896384)	C	L1MC5	LINE/L1	(345)	2432	2398	4398937
1975	14.8	1.0	0.0	chrX	24144512	24144801	(131896094)	+	AluJb	SINE/Alu	2	294	(18)	4398939
1573	25.0	7.3	1.8	chrX	30950868	30951892	(125089003)	+	L1MCa	LINE/L1	814	1996	(5132)	4409041
5612	20.9	6.0	2.1	chrX	46989300	46990650	(109050245)	C	L1MDa	LINE/L1	(4561)	2099	694	4433178
4436	25.5	5.5	2.9	chrX	64320278	64321750	(91719145)	+	L1M4	LINE/L1	268	1782	(5838)	4451180
1369	17.9	1.9	0.0	chrX	64321748	64322042	(91718853)	C	L1M2	LINE/L1	(2083)	4063	3746	4451182
3511	20.8	9.9	11.3	chrX	68369337	68369648	(87671247)	+	L1M4	LINE/L1	1047	1406	(5201)	4456140
4509	20.9	5.6	2.1	chrX	68369648	68370011	(87670884)	+	L1M4	LINE/L1	1587	1978	(5642)	4456140
38	0.0	0.0	0.0	chrX	68370012	68370044	(87670851)	+	(AT)n	Simple_repeat	1	33	(0)	4456146
4509	20.9	5.6	2.1	chrX	68370045	68370214	(87670681)	+	L1M4	LINE/L1	1979	2145	(5475)	4456140
2264	12.3	0.0	3.2	chrX	68370215	68370522	(87670373)	+	AluSz	SINE/Alu	1	298	(14)	4456147
8726	17.0	2.2	1.2	chrX	85038551	85041064	(70999831)	C	L1PA16	LINE/L1	(2627)	4687	2130	4476553
10241	15.7	1.2	4.7	chrX	86122615	86125416	(69915479)	C	L1PREC2	LINE/L1	(2231)	5910	3221	4477760
9834	6.8	11.8	0.0	chrX	88745500	88746890	(67294005)	C	LTR12C	LTR/ERV1	(0)	1579	3	4480626
196	32.9	1.2	0.0	chrX	101410654	101410732	(54630163)	+	L2	LINE/L2	2731	2810	(609)	4495995
20067	13.6	1.5	0.9	chrX	102618924	102626033	(53414862)	C	L1PREC2	LINE/L1	(8)	8147	1026	4497449
20802	8.7	2.5	1.1	chrX	102663701	102666566	(53374329)	C	L1PA10	LINE/L1	(56)	6427	3502	4497484
740	2.1	0.0	5.9	chrX	106737219	106737319	(49303576)	C	L1PA3	LINE/L1	(0)	6155	6061	4503124
229	29.4	13.7	1.7	chrX	106737320	106737333	(49303562)	+	Helitron2Na_Mam	RC?/Helitron?	192	213	(111)	4503123
2146	13.8	3.2	0.3	chrX	106737334	106737667	(49303228)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	4503125
3279	22.2	6.2	0.9	chrX	111554842	111555613	(44485282)	C	L1MD2	LINE/L1	(15)	6344	5529	4510074
1532	19.3	2.1	2.3	chrX	111555619	111555942	(44484953)	+	MER21C	LTR/ERVL	4	420	(518)	4510075
3110	25.8	8.2	4.1	chrX	113580432	113581862	(42459033)	C	L1M4c	LINE/L1	(4728)	2021	201	4512960
11207	11.3	1.5	0.3	chrX	115203341	115204951	(40835944)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	4515086
1769	24.9	8.2	6.7	chrX	120010332	120010932	(36029963)	+	L1MCb	LINE/L1	1391	2017	(4734)	4522320
18	19.8	5.6	1.8	chrX	120302868	120302921	(35737974)	+	(TC)n	Simple_repeat	1	57	(0)	4522736
4039	15.9	4.5	11.5	chrX	123716916	123717773	(32323122)	+	L1M4c	LINE/L1	4203	4966	(1410)	4527160
432	18.5	6.2	4.9	chrX	123717778	123717877	(32323018)	C	MER2	DNA/TcMar-Tigger	(0)	345	130	4527165
332	22.6	0.0	0.0	chrX	123717878	123717939	(32322956)	+	MER2	DNA/TcMar-Tigger	1	62	(283)	4527166
252	14.3	0.0	4.5	chrX	123717972	123718015	(32322880)	C	MER2	DNA/TcMar-Tigger	(284)	61	20	4527165
3090	15.6	3.3	3.3	chrX	123718038	123718477	(32322418)	+	L1M4c	LINE/L1	4972	5394	(985)	4527160
21740	13.8	1.6	1.2	chrX	128177569	128183892	(27857003)	+	L1PA11	LINE/L1	7	6358	(1)	4533030
7386	2.7	0.0	38.3	chrX	129849745	129851969	(26188926)	+	SVA_D	Retroposon/SVA	1	1368	(18)	4535429
689	30.5	0.0	1.6	chrX	131841950	131842139	(24198756)	+	MIR	SINE/MIR	73	259	(3)	4538562
1520	29.2	8.7	4.8	chrX	132320651	132322143	(23718752)	C	L1MEc	LINE/L1	(4842)	1558	1	4539209
4778	24.2	7.0	6.7	chrX	134312830	134313899	(21726996)	+	L1MB5	LINE/L1	799	1855	(5662)	4542412
1945	13.9	5.9	0.0	chrX	134313916	134314203	(21726692)	+	AluJb	SINE/Alu	1	306	(6)	4542418
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
2333	9.6	0.0	3.4	chrX	150927643	150927996	(5112899)	C	AluSq2	SINE/Alu	(0)	313	1	4566742
1143	20.9	13.9	6.0	chrX	150927997	150928068	(5112827)	C	MER2	DNA/TcMar-Tigger	(273)	72	1	4566740
764	20.2	3.0	0.1	chrX	150928101	150928263	(5112632)	C	MLT1C	LTR/ERVL-MaLR	(136)	369	186	4566743
828	13.6	1.7	0.0	chrX	150928288	150928405	(5112490)	C	FLAM_C	SINE/Alu	(12)	131	12	4566744
10837	11.2	3.4	0.2	chrX	151470697	151472274	(4568621)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	4567683
333	21.9	3.0	0.0	chrY	10663511	10663574	(46563841)	C	AluYj4	SINE/Alu	(22)	289	224	4587921
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057