2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
1063	10.4	0.0	0.0	chr1	1016361	1016495	(247939927)	C	AluSz	SINE/Alu	(176)	136	2	1283
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
1435	22.2	7.0	10.3	chr1	15129457	15129978	(233826444)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	24597
1528	17.4	14.2	7.8	chr1	15130071	15130444	(233825978)	C	MER57E2	LTR/ERV1	(0)	402	1	24598
1061	26.8	3.6	1.2	chr1	16560269	16560669	(232395753)	+	L1MD	LINE/L1	4847	5257	(889)	27757
779	27.4	1.0	0.0	chr1	16560670	16560870	(232395552)	+	MLT2B4	LTR/ERVL	1	203	(353)	27758
254	20.3	6.3	0.0	chr1	16560887	16560960	(232395462)	+	MLT2B4	LTR/ERVL	414	492	(70)	27758
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
2261	10.5	1.0	0.0	chr1	16728032	16728327	(232228095)	+	AluSz	SINE/Alu	1	299	(13)	28016
16	19.5	0.0	0.0	chr1	21782991	21783025	(227173397)	+	(CCG)n	Simple_repeat	1	35	(0)	38657
15	19.1	0.0	6.4	chr1	26111803	26111849	(222844573)	+	(CGG)n	Simple_repeat	1	47	(0)	48599
15	18.9	0.0	0.0	chr1	26112086	26112121	(222844301)	+	(GCCCCCA)n	Simple_repeat	1	36	(0)	48600
2284	11.9	0.9	4.5	chr1	27992203	27992554	(220963868)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	53021
1318	13.3	0.5	3.5	chr1	28153019	28153221	(220803201)	+	AluJo	SINE/Alu	7	203	(109)	53389
1948	12.1	0.3	10.1	chr1	28153464	28153607	(220802815)	+	AluJb	SINE/Alu	1	133	(179)	53390
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
614	28.6	8.7	0.9	chr1	29182217	29182438	(219773984)	+	MIRb	SINE/MIR	28	268	(0)	56089
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
26	0.0	6.2	0.0	chr1	31413154	31413185	(217543237)	+	(GGGGCC)n	Simple_repeat	1	34	(0)	60629
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
4628	18.4	1.4	7.5	chr1	31866403	31867008	(217089414)	+	MER49	LTR/ERV1	325	923	(0)	61501
632	28.9	11.2	5.3	chr1	32151093	32151739	(216804683)	C	L1MEc	LINE/L1	(5566)	834	131	62212
255	21.3	0.0	0.0	chr1	32151754	32151800	(216804622)	C	L1MEc	LINE/L1	(6317)	83	37	62212
291	33.0	6.4	2.0	chr1	32151803	32151997	(216804425)	+	L1M5	LINE/L1	2330	2533	(3613)	62216
1683	9.7	0.3	21.7	chr1	32647075	32647456	(216308966)	+	AluSx3	SINE/Alu	2	301	(10)	63393
3323	11.3	6.3	0.8	chr1	32647478	32647975	(216308447)	+	MER1A	DNA/hAT-Charlie	3	529	(0)	63394
2372	10.0	0.7	0.0	chr1	33054748	33055056	(215901366)	C	AluSx	SINE/Alu	(1)	311	1	64346
333	25.0	11.5	7.8	chr1	33055086	33055302	(215901120)	C	LTR78B	LTR/ERV1	(81)	1215	990	64347
379	33.1	2.5	1.9	chr1	35079020	35079179	(213877243)	C	MIR	SINE/MIR	(87)	175	15	67987
2142	8.2	4.4	0.0	chr1	35079830	35080109	(213876313)	+	AluSx1	SINE/Alu	1	293	(19)	67988
20	27.7	0.0	1.7	chr1	35886950	35887007	(213069415)	+	(GT)n	Simple_repeat	1	58	(0)	69705
2213	9.7	4.3	0.0	chr1	37533135	37533422	(211423000)	+	AluSx3	SINE/Alu	1	301	(10)	72947
703	19.6	11.7	8.5	chr1	37533430	37533652	(211422770)	+	MIR	SINE/MIR	32	262	(0)	72948
219	34.2	7.1	3.5	chr1	37533893	37534010	(211422412)	+	MIR3	SINE/MIR	6	123	(85)	72949
926	15.9	0.0	0.0	chr1	37534161	37534292	(211422130)	C	FLAM_A	SINE/Alu	(10)	132	1	72950
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
390	28.2	3.7	5.2	chr1	41516381	41516571	(207439851)	+	L2a	LINE/L2	2485	2672	(747)	80956
274	35.1	12.0	1.6	chr1	41516649	41517082	(207439340)	+	L2a	LINE/L2	2942	3426	(0)	80956
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
2091	12.0	4.1	3.0	chr1	42400986	42401320	(206555102)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	82454
548	20.2	3.9	0.0	chr1	42401365	42401463	(206554959)	+	FRAM	SINE/Alu	59	161	(15)	82455
259	34.8	11.7	3.6	chr1	42401473	42401910	(206554512)	C	L2b	LINE/L2	(1240)	2179	1702	82452
13	3.7	10.7	0.0	chr1	45347117	45347144	(203609278)	+	(CTGCCC)n	Simple_repeat	1	31	(0)	87772
2136	11.3	3.6	0.0	chr1	45347285	45347575	(203608847)	+	AluSz	SINE/Alu	2	303	(9)	87773
1998	15.4	4.4	1.2	chr1	45794283	45794610	(203161812)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	88794
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
12	26.8	4.9	1.6	chr1	54249709	54249769	(194706653)	+	A-rich	Low_complexity	1	64	(0)	104740
258	30.6	0.0	0.0	chr1	54249820	54249891	(194706531)	C	MIR	SINE/MIR	(80)	182	111	104741
359	28.1	0.0	1.9	chr1	54285871	54285975	(194670447)	+	MIR3	SINE/MIR	78	180	(28)	104803
437	25.3	19.1	0.5	chr1	54716193	54716383	(194240039)	+	MIRb	SINE/MIR	27	261	(7)	105733
1335	20.3	16.4	0.0	chr1	55412010	55412320	(193544102)	+	MER57E1	LTR/ERV1	1	372	(0)	107054
1784	19.2	3.6	5.8	chr1	55412353	55412800	(193543622)	C	MER31B	LTR/ERV1	(28)	438	1	107055
302	34.2	3.1	5.6	chr1	56400294	56400491	(192555931)	+	MIRc	SINE/MIR	12	204	(64)	108746
413	27.2	18.6	0.0	chr1	56400534	56400663	(192555759)	C	MER91A	DNA/hAT-Tip100	(0)	196	35	108747
2256	14.6	6.2	0.5	chr1	56400664	56401042	(192555380)	C	MER57E2	LTR/ERV1	(0)	402	1	108748
413	27.2	18.6	0.0	chr1	56401043	56401069	(192555353)	C	MER91A	DNA/hAT-Tip100	(162)	34	4	108747
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
14	19.4	2.3	2.3	chr1	58546475	58546517	(190409905)	+	(TCCCC)n	Simple_repeat	1	44	(0)	113060
215	27.2	17.4	0.9	chr1	58903525	58903639	(190052783)	C	MIRb	SINE/MIR	(12)	256	119	113783
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
360	22.8	9.0	7.7	chr1	59506821	59506982	(189449440)	C	L1ME4a	LINE/L1	(36)	6088	5927	114988
2214	15.1	3.0	6.5	chr1	59506983	59507400	(189449022)	C	MER57B2	LTR/ERV1	(0)	403	1	114989
343	29.6	2.3	0.8	chr1	60172686	60172811	(188783611)	C	hAT-N1_Mam	DNA/hAT-Tip100?	(141)	199	72	116126
1632	20.9	6.8	0.0	chr1	60172913	60173271	(188783151)	+	MER57D	LTR/ERV1	27	411	(0)	116127
282	34.1	6.1	5.4	chr1	60173455	60173477	(188782945)	+	MIR1_Amn	SINE/MIR	20	40	(190)	116128
802	24.7	0.5	3.6	chr1	60173478	60173670	(188782752)	C	MER5A	DNA/hAT-Charlie	(2)	187	1	116129
34086	5.6	0.8	0.8	chr1	62754825	62760515	(186195907)	+	HERV9NC-int	LTR/ERV1	1	5187	(931)	120771
191	21.9	4.7	0.0	chr1	63063418	63063458	(185892964)	+	MIRc	SINE/MIR	30	72	(196)	121314
900	14.9	5.6	0.0	chr1	63063520	63063687	(185892735)	+	MER20	DNA/hAT-Charlie	42	219	(0)	121315
398	22.4	8.1	5.3	chr1	63063688	63063819	(185892603)	+	MIRc	SINE/MIR	122	257	(11)	121314
22	20.2	7.4	1.1	chr1	63523647	63523727	(185432695)	+	(TCTCTG)n	Simple_repeat	1	87	(0)	122201
652	24.7	4.5	3.5	chr1	64166963	64167159	(184789263)	C	MIRb	SINE/MIR	(66)	202	4	123436
21	18.1	0.0	8.2	chr1	64966524	64966596	(183989826)	+	(CCGCC)n	Simple_repeat	1	73	(0)	124796
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
236	27.5	8.4	0.0	chr1	65514478	65514608	(183441814)	C	L1ME4a	LINE/L1	(28)	6096	5954	125917
1445	21.2	4.3	3.5	chr1	66838171	66838541	(182117881)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	127844
13	12.2	8.3	0.0	chr1	66930267	66930302	(182026120)	+	(GGCAGC)n	Simple_repeat	1	39	(0)	127982
972	29.7	11.1	7.3	chr1	67089669	67089817	(181866605)	C	L1MEj	LINE/L1	(1599)	561	413	128200
2467	13.8	3.4	2.5	chr1	67089818	67090224	(181866198)	C	MER57D	LTR/ERV1	(0)	411	1	128201
974	14.8	14.1	2.2	chr1	67500199	67500467	(181455955)	+	Charlie1a	DNA/hAT-Charlie	1150	1455	(0)	128993
183	26.5	15.9	5.0	chr1	67500829	67500967	(181455455)	+	MIR3	SINE/MIR	46	202	(6)	128994
358	29.5	6.3	13.0	chr1	67701118	67701456	(181254966)	+	L2c	LINE/L2	3072	3386	(1)	129440
1910	14.7	3.5	2.7	chr1	67798110	67798445	(181157977)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	129595
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
15	5.6	0.0	0.0	chr1	71905865	71905883	(177050539)	+	(A)n	Simple_repeat	1	19	(0)	135509
1021	29.3	3.1	1.6	chr1	71905884	71906205	(177050217)	+	MER57E1	LTR/ERV1	29	355	(17)	135510
1188	11.9	0.0	2.1	chr1	71906207	71906395	(177050027)	+	L1PB1	LINE/L1	5964	6148	(3)	135511
12	22.1	0.0	0.0	chr1	77281649	77281680	(171674742)	+	(GTGTGT)n	Simple_repeat	1	32	(0)	142614
12	20.6	1.7	8.3	chr1	77281880	77281938	(171674484)	+	(GCGCG)n	Simple_repeat	1	60	(0)	142615
2785	9.9	17.8	1.8	chr1	77626202	77626644	(171329778)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	143196
2119	14.9	2.3	0.3	chr1	80578937	80579313	(168377109)	+	MER57C1	LTR/ERV1	1	385	(0)	147385
20	15.7	7.9	3.7	chr1	84505927	84506006	(164450416)	+	(CCCG)n	Simple_repeat	1	83	(0)	152615
13	14.7	3.3	0.0	chr1	84506304	84506333	(164450089)	+	GA-rich	Low_complexity	1	31	(0)	152616
555	28.2	12.6	0.0	chr1	86991623	86991803	(161964619)	+	MIRb	SINE/MIR	25	231	(37)	156453
1567	13.5	8.7	0.4	chr1	86991918	86992169	(161964253)	+	MER1B	DNA/hAT-Charlie	1	275	(64)	156454
11481	10.7	1.5	0.1	chr1	88617860	88619466	(160336956)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	158693
2644	6.2	0.0	0.0	chr1	89709742	89710050	(159246372)	C	AluY	SINE/Alu	(2)	309	1	160226
245	19.3	3.3	1.7	chr1	89710162	89710231	(159246191)	+	MIRc	SINE/MIR	159	222	(46)	160223
363	26.2	6.5	0.0	chr1	89710321	89710465	(159245957)	+	Charlie7	DNA/hAT-Charlie	1	155	(2457)	160227
28	22.0	0.0	0.0	chr1	90717832	90717894	(158238528)	+	GA-rich	Low_complexity	1	63	(0)	161676
23	15.2	6.7	5.3	chr1	90717998	90718003	(158238419)	+	(CCGCGC)n	Simple_repeat	1	10	(85)	161677
12	17.6	7.7	0.0	chr1	90718004	90718042	(158238380)	+	(CCAGCG)n	Simple_repeat	1	42	(0)	161678
23	15.2	6.7	5.3	chr1	90718043	90718086	(158238336)	+	(CCGCGC)n	Simple_repeat	11	95	(0)	161677
13	24.6	2.3	0.0	chr1	90718250	90718292	(158238130)	+	G-rich	Low_complexity	1	44	(0)	161679
2217	12.6	0.0	0.0	chr1	92194261	92194554	(156761868)	+	AluSz	SINE/Alu	1	294	(18)	164048
723	23.1	6.1	6.4	chr1	92194555	92194632	(156761790)	C	MER2	DNA/TcMar-Tigger	(273)	72	1	164042
885	16.0	0.0	0.0	chr1	92194634	92194783	(156761639)	+	MER57D	LTR/ERV1	281	430	(4)	164041
307	34.5	5.1	3.7	chr1	93053396	93053666	(155902756)	+	L2a	LINE/L2	2500	2774	(645)	165614
1141	18.8	1.9	0.0	chr1	93053671	93053877	(155902545)	+	MER20	DNA/hAT-Charlie	6	216	(3)	165615
592	34.3	8.5	4.4	chr1	93053881	93054315	(155902107)	+	L2a	LINE/L2	2769	3238	(188)	165614
3468	13.2	1.3	1.9	chr1	93320371	93320902	(155635520)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	166105
870	30.7	5.6	7.8	chr1	93320903	93321202	(155635220)	+	L2a	LINE/L2	3114	3417	(9)	166099
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
11	17.3	0.0	5.6	chr1	94419001	94419036	(154537386)	+	G-rich	Low_complexity	1	36	(0)	167759
304	20.9	6.2	4.2	chr1	94937616	94937710	(154018712)	+	L2c	LINE/L2	3278	3374	(13)	168540
1414	21.4	7.3	0.9	chr1	94937713	94938060	(154018362)	+	MER57E1	LTR/ERV1	1	372	(0)	168541
242	32.5	14.5	1.1	chr1	94938161	94938631	(154017791)	C	L2a	LINE/L2	(4)	3422	2878	168542
1127	16.7	6.0	0.8	chr1	95219068	95219320	(153737102)	C	L1MC3	LINE/L1	(1)	7784	7518	169027
1269	17.8	15.3	0.7	chr1	95219371	95219670	(153736752)	+	MER57E1	LTR/ERV1	17	368	(4)	169028
2368	17.4	1.1	0.9	chr1	95219677	95220128	(153736294)	C	L1MC3	LINE/L1	(285)	7500	7048	169027
577	27.1	6.1	5.8	chr1	96878154	96878641	(152077781)	C	L1MC4	LINE/L1	(211)	7831	7340	171286
1061	24.8	7.8	4.0	chr1	96878786	96879180	(152077242)	C	MER57D	LTR/ERV1	(0)	411	1	171287
1555	16.9	6.0	4.1	chr1	99383193	99383555	(149572867)	+	MER57E1	LTR/ERV1	3	372	(0)	174766
193	30.7	5.6	1.0	chr1	99383654	99383755	(149572667)	C	L2	LINE/L2	(575)	2844	2738	174767
1854	29.0	11.5	3.1	chr1	100781936	100782493	(148173929)	+	L2a	LINE/L2	2816	3419	(7)	177036
2240	14.5	8.1	0.7	chr1	100782590	100783048	(148173374)	C	LTR54B	LTR/ERV1	(2)	496	1	177038
341	24.8	8.0	6.9	chr1	108813915	108814074	(140142348)	+	Charlie4z	DNA/hAT-Charlie	6	167	(0)	187365
1667	15.3	18.6	1.9	chr1	108814213	108814624	(140141798)	C	LTR54B	LTR/ERV1	(2)	496	1	187366
1029	16.9	9.1	2.2	chr1	108863016	108863446	(140092976)	C	LTR54B	LTR/ERV1	(2)	496	1	187447
17	3.0	2.4	9.5	chr1	109397405	109397445	(139558977)	+	(CCCG)n	Simple_repeat	1	42	(0)	188515
13	18.3	4.3	4.1	chr1	109397924	109397970	(139558452)	+	(CCGC)n	Simple_repeat	1	49	(0)	188516
29	18.2	1.6	0.0	chr1	109484573	109484634	(139471788)	+	(TCCA)n	Simple_repeat	1	63	(0)	188669
2661	10.2	1.0	10.3	chr1	110187138	110187575	(138768847)	C	MER57B1	LTR/ERV1	(4)	397	1	189709
1867	17.4	0.3	4.2	chr1	111496200	111496402	(137460020)	+	MER89	LTR/ERV1	221	416	(143)	191611
1864	16.9	8.8	1.5	chr1	111496403	111496739	(137459683)	+	MER57E1	LTR/ERV1	5	368	(4)	191613
1867	17.4	0.3	4.2	chr1	111496740	111496888	(137459534)	+	MER89	LTR/ERV1	417	559	(0)	191611
632	27.9	14.1	6.4	chr1	111754741	111755081	(137201341)	C	L2a	LINE/L2	(2)	3424	3064	192020
209	27.7	6.7	0.0	chr1	111755063	111755145	(137201277)	C	L2a	LINE/L2	(941)	2478	2390	192020
18	9.4	0.0	5.3	chr1	111755146	111755183	(137201239)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	192021
292	29.2	1.4	0.0	chr1	111755188	111755259	(137201163)	C	L2a	LINE/L2	(1018)	2401	2329	192020
2743	8.1	8.7	1.0	chr1	112809667	112810079	(136146343)	+	LTR7	LTR/ERV1	1	448	(2)	193827
296	17.7	4.8	4.8	chr1	112889026	112889108	(136067314)	C	MER34B-int	LTR/ERV1	(322)	5034	4952	193991
362	18.3	0.0	0.0	chr1	112889120	112889179	(136067243)	C	LTR47A	LTR/ERVL	(0)	432	373	193992
860	13.9	0.0	4.4	chr1	112889181	112889317	(136067105)	+	FLAM_C	SINE/Alu	1	131	(12)	193993
1858	16.7	7.4	5.5	chr1	112889312	112889710	(136066712)	C	LTR47A	LTR/ERVL	(45)	407	1	193992
479	27.6	17.3	0.0	chr1	113991745	113991940	(134964482)	+	MIRc	SINE/MIR	32	268	(0)	195896
1656	15.2	8.1	0.7	chr1	114582047	114582322	(134374100)	C	AluJr	SINE/Alu	(10)	302	5	196898
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
11077	11.6	3.4	0.1	chr1	119700939	119702512	(129253910)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	204418
14	19.8	2.4	2.3	chr1	119711884	119711925	(129244497)	+	GA-rich	Low_complexity	1	43	(0)	204433
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
27	0.0	0.0	0.0	chr1	145425615	145425640	(103530782)	+	(AGGCGC)n	Simple_repeat	1	26	(0)	210934
19	12.3	9.4	0.0	chr1	146037713	146037765	(102918657)	+	GA-rich	Low_complexity	1	58	(0)	211992
637	2.8	0.0	0.0	chr1	146038044	146038115	(102918307)	+	tRNA-His-CAY_	tRNA	1	72	(3)	211993
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
294	17.2	7.2	3.0	chr1	146377412	146377477	(102578945)	C	MER45B	DNA/hAT-Tip100	(660)	380	312	212534
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
1053	21.9	13.8	9.0	chr1	146472709	146472883	(102483539)	C	L1M5	LINE/L1	(810)	5336	5165	212718
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
2133	9.6	2.3	0.0	chr1	151155826	151156127	(97800295)	+	AluSq2	SINE/Alu	2	310	(3)	220624
12	15.3	3.5	0.0	chr1	151346696	151346724	(97609698)	+	(CAA)n	Simple_repeat	1	30	(0)	221009
12	11.2	3.2	3.1	chr1	152460340	152460370	(96496052)	+	(GGTGTG)n	Simple_repeat	1	32	(0)	222820
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
13	10.5	6.5	0.0	chr1	156421760	156421790	(92534632)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	230116
1855	13.6	6.3	1.4	chr1	158168875	158169161	(90787261)	+	AluSz	SINE/Alu	2	303	(9)	232785
2388	11.5	3.1	4.8	chr1	158169162	158169438	(90786984)	+	MER57C1	LTR/ERV1	103	385	(0)	232784
778	21.7	2.6	1.2	chr1	158169442	158169701	(90786721)	+	MER34B-int	LTR/ERV1	3	297	(5890)	232784
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
12	13.9	0.0	0.0	chr1	167220935	167220958	(81735464)	+	(CAG)n	Simple_repeat	1	24	(0)	246372
16	11.6	0.0	0.0	chr1	167926611	167926638	(81029784)	+	(CTG)n	Simple_repeat	1	28	(0)	247552
431	13.5	0.0	0.0	chr1	167926639	167926712	(81029710)	+	MER20	DNA/hAT-Charlie	93	166	(53)	247553
274	32.0	14.9	5.5	chr1	167926762	167927052	(81029370)	+	L2c	LINE/L2	3007	3329	(58)	247554
88	18.7	6.9	1.4	chr1	168331828	168331881	(80624541)	+	(AT)n	Simple_repeat	2	267	(0)	248225
734	18.1	1.7	0.0	chr1	168331882	168331997	(80624425)	C	AluJr	SINE/Alu	(194)	118	1	248226
754	20.9	1.8	1.2	chr1	168332006	168332170	(80624252)	+	MER57D	LTR/ERV1	246	411	(0)	248223
407	25.5	4.8	0.0	chr1	168332320	168332417	(80624005)	+	MER57A-int	LTR/ERV1	147	249	(5938)	248223
279	37.9	1.6	1.6	chr1	168332486	168332729	(80623693)	+	MER57A-int	LTR/ERV1	936	1179	(6434)	248223
785	25.6	3.1	7.1	chr1	168340455	168341082	(80615340)	+	MER31-int	LTR/ERV1	5446	5802	(385)	248238
883	27.5	7.7	2.0	chr1	168341132	168341472	(80614950)	+	MER57E1	LTR/ERV1	11	372	(0)	248238
849	31.6	15.4	1.2	chr1	168341477	168342065	(80614357)	C	L3	LINE/CR1	(282)	3817	3130	248239
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
1298	29.7	7.1	1.1	chr1	172531682	172532158	(76424264)	+	L4_A_Mam	LINE/RTE-X	3531	4038	(952)	254352
370	22.2	0.0	1.2	chr1	175887938	175888019	(73068403)	C	MER5A	DNA/hAT-Charlie	(0)	189	109	259395
304	25.3	0.0	2.1	chr1	175888020	175888030	(73068392)	+	MER5B	DNA/hAT-Charlie	1	91	(87)	259396
17	27.9	0.0	6.1	chr1	178725437	178725450	(70230972)	+	G-rich	Low_complexity	1	18	(64)	263567
16	4.5	0.0	0.0	chr1	178725451	178725473	(70230949)	+	(GGGA)n	Simple_repeat	1	23	(0)	263568
17	27.9	0.0	6.1	chr1	178725474	178725518	(70230904)	+	G-rich	Low_complexity	19	82	(0)	263567
13	19.5	0.0	2.7	chr1	178726029	178726065	(70230357)	+	G-rich	Low_complexity	1	37	(0)	263569
31	3.0	0.0	2.8	chr1	179264612	179264647	(69691775)	+	(AC)n	Simple_repeat	1	36	(0)	264495
939	18.5	12.7	0.6	chr1	179264656	179264976	(69691446)	C	MER57E1	LTR/ERV1	(1)	371	12	264496
20	0.0	0.0	0.0	chr1	179586177	179586198	(69370224)	+	(A)n	Simple_repeat	1	22	(0)	265038
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
12	19.6	2.9	0.0	chr1	179954761	179954795	(69001627)	+	(CGCAGC)n	Simple_repeat	1	36	(0)	265605
184	14.3	0.0	0.0	chr1	184151813	184151840	(64804582)	C	MIRc	SINE/MIR	(122)	146	119	272180
473	21.0	1.0	0.0	chr1	184290033	184290132	(64666290)	+	HERVL18-int	LTR/ERVL	5946	6046	(1)	272404
2166	15.3	2.2	4.9	chr1	184290254	184290618	(64665804)	+	LTR18A	LTR/ERVL	1	355	(2)	272404
2127	21.3	2.2	6.4	chr1	185063566	185064093	(63892329)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	273673
1306	14.0	0.0	7.4	chr1	186402405	186402625	(62553797)	C	AluJo	SINE/Alu	(22)	290	86	275540
616	24.0	2.3	0.0	chr1	186402635	186402759	(62553663)	C	AluJo	SINE/Alu	(56)	256	129	275542
568	20.2	11.3	0.8	chr1	186402763	186402881	(62553541)	C	AluJr4	SINE/Alu	(179)	133	1	275543
352	33.7	6.5	4.7	chr1	186679921	186680132	(62276290)	C	MIRb	SINE/MIR	(51)	217	2	275943
13	14.3	4.8	4.5	chr1	186680276	186680317	(62276105)	+	(GGCGC)n	Simple_repeat	1	44	(0)	275944
4624	13.3	5.3	1.1	chr1	189149550	189150337	(59806085)	+	LTR1A2	LTR/ERV1	15	837	(0)	279202
8278	9.9	1.6	0.7	chr1	192977227	192978516	(55977906)	+	Charlie3	DNA/hAT-Charlie	1	1348	(1358)	284173
1934	16.1	4.7	0.9	chr1	193070969	193071294	(55885128)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	284302
21	20.9	2.8	4.0	chr1	193105439	193105510	(55850912)	+	(CCCGC)n	Simple_repeat	1	74	(0)	284362
2233	16.4	1.5	10.2	chr1	197889785	197890226	(51066196)	+	MER57B2	LTR/ERV1	1	403	(0)	290496
1494	30.5	5.6	12.3	chr1	197890227	197890352	(51066070)	C	L1ME3E	LINE/L1	(6283)	820	698	290492
2718	7.4	0.0	0.0	chr1	197890353	197890663	(51065759)	C	AluY	SINE/Alu	(0)	311	1	290497
901	29.3	1.2	3.3	chr1	199765866	199766197	(49190225)	+	L1M4a1	LINE/L1	39	363	(6037)	292956
1789	24.0	8.6	5.8	chr1	199766200	199766751	(49189671)	+	L1M4a1	LINE/L1	699	1609	(1143)	292956
2182	12.7	0.3	3.4	chr1	199799223	199799572	(49156850)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	293012
2373	13.9	4.5	0.5	chr1	199946397	199946779	(49009643)	+	MER57B1	LTR/ERV1	3	401	(0)	293298
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
2472	14.0	1.6	0.3	chr1	200714664	200715043	(48241379)	+	MER57C1	LTR/ERV1	1	385	(0)	294860
241	34.4	8.0	6.0	chr1	200715044	200715096	(48241326)	+	L2	LINE/L2	2081	2130	(1289)	294859
695	29.6	3.5	1.2	chr1	200715097	200715349	(48241073)	+	MIR	SINE/MIR	3	261	(1)	294861
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
20	15.7	0.0	7.0	chr1	201648566	201648622	(47307800)	+	(CCCCCG)n	Simple_repeat	1	57	(0)	296421
28	23.4	1.7	6.6	chr1	201648715	201648833	(47307589)	+	(GCG)n	Simple_repeat	1	121	(0)	296422
16	9.7	0.0	0.0	chr1	204495395	204495416	(44461006)	+	(A)n	Simple_repeat	1	22	(0)	301632
817	10.3	0.0	1.6	chr1	204495684	204495811	(44460611)	+	MER39	LTR/ERV1	582	707	(0)	301633
12	13.1	0.0	9.8	chr1	205344084	205344124	(43612298)	+	(CCCCCG)n	Simple_repeat	1	41	(0)	303253
1459	11.6	5.3	17.1	chr1	206612818	206613001	(42343421)	+	AluJb	SINE/Alu	1	132	(180)	305398
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
8263	8.4	2.1	1.5	chr1	208445387	208446123	(40510299)	C	L1PB3	LINE/L1	(5268)	1594	846	308158
1271	8.2	0.0	0.0	chr1	208446128	208446309	(40510113)	C	L1PB3	LINE/L1	(6428)	434	253	308158
17	20.6	4.0	5.2	chr1	210232522	210232595	(38723827)	+	G-rich	Low_complexity	1	77	(0)	310824
14	23.5	0.0	5.5	chr1	210233021	210233075	(38723347)	+	G-rich	Low_complexity	1	55	(0)	310825
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
753	18.7	6.6	3.9	chr1	212455277	212455454	(36500968)	+	LTR54	LTR/ERV1	1	183	(327)	314544
828	21.6	2.8	0.5	chr1	212455476	212455684	(36500738)	+	LTR54	LTR/ERV1	297	510	(0)	314544
16	17.1	4.9	2.3	chr1	212558963	212559003	(36397419)	+	(CG)n	Simple_repeat	1	43	(0)	314754
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
26	0.0	0.0	0.0	chr1	220527824	220527848	(28428574)	+	(ACAA)n	Simple_repeat	1	25	(0)	326368
15	14.4	0.0	0.0	chr1	220527854	220527877	(28428545)	+	(A)n	Simple_repeat	1	24	(0)	326369
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
15	23.4	2.8	5.4	chr1	220528499	220528570	(28427852)	+	(CCGCCTC)n	Simple_repeat	1	74	(0)	326372
1760	20.6	2.2	3.5	chr1	221992410	221992782	(26963640)	+	MER57E1	LTR/ERV1	5	372	(0)	328472
301	35.6	2.8	4.8	chr1	221992783	221992916	(26963506)	C	MIR	SINE/MIR	(78)	184	47	328471
1020	19.2	3.2	6.8	chr1	222465900	222466195	(26490227)	+	MER33	DNA/hAT-Charlie	17	301	(23)	329168
1943	12.6	1.5	0.0	chr1	223056377	223056645	(25899777)	+	AluSp	SINE/Alu	11	283	(30)	330112
30	0.0	0.0	0.0	chr1	223056646	223056674	(25899748)	+	(AAAAG)n	Simple_repeat	1	29	(0)	330113
433	32.8	5.9	10.7	chr1	223056675	223056882	(25899540)	C	L1MEd	LINE/L1	(796)	1669	1466	330111
2952	13.1	1.2	0.0	chr1	223056884	223057310	(25899112)	C	MER57A1	LTR/ERV1	(0)	432	1	330114
1047	22.4	12.4	3.5	chr1	223639419	223639756	(25316666)	+	MER57E1	LTR/ERV1	1	372	(0)	330947
291	22.4	10.9	1.0	chr1	223639791	223639889	(25316533)	C	MIRc	SINE/MIR	(98)	170	61	330948
2091	14.1	0.3	1.0	chr1	223880539	223880846	(25075576)	C	MER1B	DNA/hAT-Charlie	(0)	339	34	331370
776	23.1	20.9	3.7	chr1	223880849	223881303	(25075119)	+	L1MC5	LINE/L1	8742	9295	(9)	331369
1405	22.4	7.0	9.6	chr1	225582376	225582786	(23373636)	+	L1ME2z	LINE/L1	172	597	(5539)	334178
12	23.0	6.9	1.6	chr1	226062414	226062471	(22893951)	+	G-rich	Low_complexity	1	62	(0)	335129
22	24.4	3.0	4.8	chr1	226062503	226062528	(22893894)	+	G-rich	Low_complexity	1	52	(51)	335129
17	25.9	3.9	0.0	chr1	226062529	226062579	(22893843)	+	(GC)n	Simple_repeat	1	53	(0)	335130
22	24.4	3.0	4.8	chr1	226062580	226062602	(22893820)	+	G-rich	Low_complexity	53	103	(0)	335129
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
1185	10.7	4.5	0.0	chr1	226100350	226100517	(22855905)	C	AluSg4	SINE/Alu	(1)	309	134	335208
347	10.9	0.0	0.0	chr1	226100518	226100572	(22855850)	+	Alu	SINE/Alu	245	299	(2)	335209
22	10.8	0.0	0.0	chr1	226100890	226100920	(22855502)	+	(A)n	Simple_repeat	1	31	(0)	335210
4179	11.0	2.4	2.8	chr1	226100936	226101145	(22855277)	+	Tigger3b	DNA/TcMar-Tigger	1	209	(1022)	335211
3578	11.2	2.3	1.3	chr1	226101146	226101668	(22854754)	+	MER1A	DNA/hAT-Charlie	2	529	(0)	335212
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
1896	14.6	1.3	1.0	chr1	226832193	226832494	(22123928)	C	AluSx	SINE/Alu	(9)	303	1	336561
17	0.0	0.0	0.0	chr1	227315956	227315974	(21640448)	+	(A)n	Simple_repeat	1	19	(0)	337279
2224	18.6	3.2	2.1	chr1	227564047	227564512	(21391910)	C	MER57E3	LTR/ERV1	(16)	471	1	337651
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
645	24.6	18.8	1.7	chr1	229673634	229673931	(19282491)	+	MLT1J	LTR/ERVL-MaLR	31	391	(121)	340689
1872	25.1	4.5	0.0	chr1	229674108	229674642	(19281780)	+	LTR75	LTR/ERVL	1	560	(2)	340690
264	33.0	8.7	0.0	chr1	230029945	230030038	(18926384)	C	MER117	DNA/hAT-Charlie	(87)	110	8	341310
236	32.3	3.7	4.4	chr1	230030149	230030252	(18926170)	+	L1MEg	LINE/L1	1721	1820	(4264)	341311
2337	15.7	6.5	1.5	chr1	230030253	230030723	(18925699)	C	LTR54B	LTR/ERV1	(2)	496	1	341312
2957	14.5	11.7	18.9	chr1	230619905	230620730	(18335692)	C	MER4CL34	LTR/ERV1	(4)	761	3	342153
1913	17.6	11.9	1.4	chr1	230620789	230621231	(18335191)	C	LTR54B	LTR/ERV1	(2)	496	1	342154
24	18.8	1.6	3.1	chr1	231421889	231421952	(17534470)	+	(GGC)n	Simple_repeat	1	65	(0)	343471
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
404	32.3	7.3	0.9	chr1	233675212	233675442	(15280980)	+	Tigger15a	DNA/TcMar-Tigger	4	250	(465)	346747
1114	24.9	4.0	4.8	chr1	233675457	233675831	(15280591)	C	MER57E1	LTR/ERV1	(0)	372	1	346748
467	34.1	7.1	2.4	chr1	234914639	234914893	(14041529)	C	L2b	LINE/L2	(0)	3375	3108	348653
1588	20.6	7.6	0.6	chr1	235631198	235631392	(13325030)	+	MER57E1	LTR/ERV1	160	371	(1)	350144
2442	9.7	1.0	0.0	chr1	235631559	235631867	(13324555)	C	AluSx	SINE/Alu	(0)	312	1	350146
1696	18.9	12.7	2.0	chr1	235676285	235676726	(13279696)	+	LTR54B	LTR/ERV1	1	496	(2)	350212
2106	12.1	0.7	0.0	chr1	236011294	236011582	(12944840)	C	AluSz6	SINE/Alu	(1)	311	21	350819
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2561	14.4	1.2	0.0	chr1	236500971	236501366	(12455056)	+	MER57B2	LTR/ERV1	1	401	(2)	351769
2481	8.1	0.0	0.0	chr1	236501379	236501676	(12454746)	+	AluSx1	SINE/Alu	1	298	(14)	351770
351	29.8	2.5	0.1	chr1	236944989	236945126	(12011296)	+	MIRc	SINE/MIR	21	160	(48)	352509
2692	22.7	7.6	0.3	chr1	238266787	238267404	(10689018)	+	L1P4c	LINE/L1	1	667	(5967)	354446
404	20.5	4.3	1.3	chr1	238267407	238267524	(10688898)	C	THE1D	LTR/ERVL-MaLR	(0)	428	298	354447
3674	11.1	1.1	1.9	chr1	238267525	238267799	(10688623)	+	L1P4	LINE/L1	3579	3855	(2291)	354448
856	23.5	6.2	1.8	chr1	240036378	240036654	(8919768)	+	L1MEc	LINE/L1	3301	3590	(2729)	357022
885	16.6	2.5	2.5	chr1	240036665	240036940	(8919482)	C	MER57E1	LTR/ERV1	(11)	361	1	357028
894	24.1	4.9	1.0	chr1	240036941	240037291	(8919131)	+	L1MEc	LINE/L1	3587	3987	(2332)	357022
231	30.0	10.6	4.2	chr1	241456568	241456734	(7499688)	+	MLT1M	LTR/ERVL-MaLR	119	297	(375)	359305
427	19.0	0.0	5.7	chr1	241456761	241456865	(7499557)	C	MER67C	LTR/ERV1	(2)	709	611	359306
1217	13.2	27.3	1.3	chr1	241456866	241457254	(7499168)	C	LTR54B	LTR/ERV1	(2)	496	1	359307
339	25.7	13.2	0.0	chr1	243435025	243435129	(5521293)	C	L2a	LINE/L2	(1)	3425	3305	362591
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
1080	15.1	0.6	0.6	chr1	244796752	244796923	(4159499)	+	FAM	SINE/Alu	1	172	(13)	364795
372	25.1	15.3	5.2	chr1	244797203	244797427	(4158995)	+	MIR3	SINE/MIR	3	268	(0)	364796
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
26	6.3	0.0	0.0	chr1	244864025	244864058	(4092364)	+	(CTTCCT)n	Simple_repeat	1	34	(0)	364913
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
4966	12.7	5.4	3.2	chr10	2963940	2964791	(130832631)	+	MER4D0	LTR/ERV1	1	872	(0)	374416
1713	9.8	4.7	0.8	chr10	2965028	2965273	(130832149)	C	MER57A1	LTR/ERV1	(0)	432	177	374417
1536	22.8	2.1	0.6	chr10	2965273	2965607	(130831815)	C	MLT2D	LTR/ERVL	(74)	340	1	374418
2633	10.5	4.7	0.0	chr10	3661809	3662190	(130135232)	C	MER57B1	LTR/ERV1	(0)	401	1	375390
484	31.2	4.3	8.0	chr10	4648623	4648894	(129148528)	C	MLT1G3	LTR/ERVL-MaLR	(289)	306	2	376752
2597	12.2	1.0	2.2	chr10	5321170	5321572	(128475850)	+	MER57B1	LTR/ERV1	1	398	(3)	377569
892	23.6	4.7	4.4	chr10	5321573	5321694	(128475728)	+	Charlie1a	DNA/hAT-Charlie	394	511	(944)	377568
933	0.9	0.0	0.0	chr10	5321712	5321818	(128475604)	+	SVA_A	Retroposon/SVA	1281	1387	(0)	377570
54	0.0	0.0	0.0	chr10	5549321	5549366	(128248056)	+	(CA)n	Simple_repeat	1	46	(0)	377909
739	29.0	1.6	5.0	chr10	5549450	5549561	(128247861)	C	MIR	SINE/MIR	(1)	261	156	377910
1610	16.4	12.9	10.4	chr10	5549562	5549982	(128247440)	C	MER57C2	LTR/ERV1	(0)	434	2	377911
12	12.0	3.7	0.0	chr10	6203364	6203390	(127594032)	+	(GCCGG)n	Simple_repeat	1	28	(0)	379103
308	34.0	7.3	3.2	chr10	11787322	11787479	(122009943)	C	L2	LINE/L2	(2813)	606	442	387520
1236	24.4	6.2	0.0	chr10	11787505	11787853	(122009569)	C	MER57E1	LTR/ERV1	(0)	372	1	387521
17	17.8	0.0	0.0	chr10	11787962	11787999	(122009423)	+	(AGAGAC)n	Simple_repeat	1	38	(0)	387522
2351	8.3	0.0	3.5	chr10	12139813	12139989	(121657433)	+	AluSx1	SINE/Alu	133	303	(9)	388273
888	22.6	12.7	4.2	chr10	12139990	12140298	(121657124)	C	MER57D	LTR/ERV1	(60)	351	13	388275
750	26.3	5.4	2.3	chr10	12308715	12308928	(121488494)	C	MIR	SINE/MIR	(0)	262	42	388645
288	21.8	4.4	1.1	chr10	12595980	12596067	(121201355)	C	LTR67B	LTR/ERVL	(496)	124	34	389239
1407	21.9	2.4	2.7	chr10	12596178	12596548	(121200874)	C	MER57E1	LTR/ERV1	(2)	370	1	389240
2307	18.3	8.9	2.8	chr10	17186215	17186687	(116610735)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	396939
477	28.1	4.2	1.7	chr10	17186693	17186924	(116610498)	+	L1ME4a	LINE/L1	5661	5898	(226)	396940
3185	9.6	0.7	3.2	chr10	17432678	17433120	(116364302)	+	MER57A1	LTR/ERV1	1	432	(0)	397370
371	20.4	7.2	0.0	chr10	17433392	17433494	(116363928)	+	L1ME4c	LINE/L1	137	247	(583)	397371
719	25.5	2.8	6.3	chr10	17454961	17455182	(116342240)	+	MER58A	DNA/hAT-Charlie	2	215	(9)	397412
1214	20.6	5.1	1.1	chr10	17455192	17455525	(116341897)	+	MER57D	LTR/ERV1	8	411	(0)	397413
1424	22.0	1.1	4.9	chr10	17455527	17455894	(116341528)	+	MLT1A0	LTR/ERVL-MaLR	1	354	(11)	397414
18	0.0	0.0	0.0	chr10	17616645	17616664	(116180758)	+	(A)n	Simple_repeat	1	20	(0)	397751
15	25.3	1.5	4.5	chr10	17616954	17617019	(116180403)	+	(GCCCCCT)n	Simple_repeat	1	67	(0)	397752
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
22	29.0	0.0	0.0	chr10	22003318	22003381	(111794041)	+	(CAG)n	Simple_repeat	1	64	(0)	404666
16	23.4	0.0	2.1	chr10	22003596	22003642	(111793780)	+	(GGCG)n	Simple_repeat	1	47	(0)	404667
834	24.7	3.1	11.5	chr10	25584786	25585133	(108212289)	C	MER57D	LTR/ERV1	(0)	411	94	410394
756	15.7	17.3	0.6	chr10	26773645	26773817	(107023605)	+	MER57E1	LTR/ERV1	20	227	(145)	412276
315	21.0	8.0	2.4	chr10	26773843	26773925	(107023497)	+	MER57E1	LTR/ERV1	283	370	(2)	412276
1226	20.0	7.0	1.8	chr10	26774006	26774331	(107023091)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	412277
29	3.0	0.0	0.0	chr10	26858530	26858563	(106938859)	+	(A)n	Simple_repeat	1	34	(0)	412437
2854	12.8	0.2	4.4	chr10	28398727	28399128	(105398294)	+	MER57A1	LTR/ERV1	41	432	(0)	415006
17	16.7	2.4	2.3	chr10	32056201	32056242	(101741180)	+	(GGC)n	Simple_repeat	1	43	(0)	421235
2347	9.5	0.0	0.3	chr10	32203204	32203499	(101593923)	C	AluSx1	SINE/Alu	(17)	295	1	421547
665	19.3	6.7	8.3	chr10	32203500	32203682	(101593740)	+	LTR54	LTR/ERV1	300	510	(0)	421546
751	16.5	1.6	2.4	chr10	43350425	43350551	(90446871)	+	FLAM_C	SINE/Alu	1	126	(17)	433309
31	0.0	0.0	2.9	chr10	43396888	43396921	(90400501)	+	(GGGAG)n	Simple_repeat	1	34	(0)	433409
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
1911	16.7	5.0	1.8	chr10	44801471	44801855	(88995567)	+	MER57E2	LTR/ERV1	1	398	(4)	435259
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
224	18.5	2.0	0.8	chr10	45673228	45673289	(88124133)	+	MIRb	SINE/MIR	103	163	(105)	436410
8181	22.7	3.0	1.0	chr10	47437695	47440308	(86357114)	C	L1PA17	LINE/L1	(4110)	2743	279	439158
7670	13.6	0.3	0.0	chr10	50476473	50477580	(83319842)	+	MSTA-int	LTR/ERVL-MaLR	521	1631	(0)	443416
311	32.1	8.0	7.2	chr10	52115381	52115804	(81681618)	+	L2c	LINE/L2	2940	3388	(38)	445857
829	16.4	7.3	3.8	chr10	52115832	52115879	(81681543)	C	MER53	DNA/hAT	(2)	191	148	445858
2283	12.9	3.6	0.5	chr10	52115880	52116252	(81681170)	C	MER57C1	LTR/ERV1	(0)	385	1	445859
2236	17.0	1.5	3.0	chr10	57411951	57412357	(76385065)	C	MER57D	LTR/ERV1	(10)	401	1	452699
194	20.0	0.0	0.0	chr10	58334728	58334767	(75462655)	C	MIRc	SINE/MIR	(112)	156	117	453992
16	8.2	0.0	0.0	chr10	58334920	58334945	(75462477)	+	(GGCGG)n	Simple_repeat	1	26	(0)	453993
2322	15.7	6.9	0.0	chr10	61159146	61159547	(72637875)	+	MER57A1	LTR/ERV1	1	432	(0)	458171
279	32.0	13.3	5.6	chr10	61159612	61159790	(72637632)	+	MamSINE1	SINE/tRNA-RTE	23	217	(73)	458172
229	31.5	11.0	5.3	chr10	67259424	67259611	(66537811)	+	MIRb	SINE/MIR	25	224	(44)	467240
22	15.4	0.0	0.0	chr10	70404220	70404300	(63393122)	+	(GCGGCG)n	Simple_repeat	1	81	(0)	473404
15	15.0	2.4	4.8	chr10	70404332	70404372	(63393050)	+	(GCC)n	Simple_repeat	1	42	(0)	473405
19	22.3	5.7	1.4	chr10	73873725	73873794	(59923628)	+	(GGCGG)n	Simple_repeat	1	74	(0)	480059
13	18.6	3.7	5.4	chr10	73873907	73873960	(59923462)	+	G-rich	Low_complexity	1	56	(0)	480060
438	20.6	6.6	0.0	chr10	76288004	76288144	(57509278)	C	LTR54B	LTR/ERV1	(2)	496	346	484309
2111	9.3	2.5	0.6	chr10	76288145	76288457	(57508965)	+	L1P4	LINE/L1	5494	5812	(353)	484310
1541	25.9	8.3	1.7	chr10	76337156	76337654	(57459768)	C	L2a	LINE/L2	(0)	3426	2896	484358
1857	17.4	8.6	0.3	chr10	76337655	76337995	(57459427)	C	MER57E1	LTR/ERV1	(0)	372	1	484359
671	23.1	12.6	1.9	chr10	76337996	76338032	(57459390)	C	L2a	LINE/L2	(524)	2895	2845	484358
630	30.1	4.5	2.5	chr10	76486134	76486385	(57311037)	C	L1ME3A	LINE/L1	(5562)	1078	825	484551
548	33.5	3.5	0.0	chr10	76486418	76486611	(57310811)	C	L1ME3A	LINE/L1	(5729)	911	711	484551
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
14	7.8	0.0	6.5	chr10	79069140	79069170	(54728252)	+	(CGGAG)n	Simple_repeat	1	31	(0)	489001
16	17.2	2.4	2.4	chr10	79069217	79069257	(54728165)	+	(CGG)n	Simple_repeat	1	42	(0)	489002
990	22.4	12.8	7.9	chr10	83286373	83286750	(50510672)	+	MER57D	LTR/ERV1	13	411	(0)	495198
325	16.0	5.9	3.1	chr10	84186384	84187265	(49610157)	+	(TG)n	Simple_repeat	1	934	(0)	496452
290	16.8	4.8	4.9	chr10	84187266	84187272	(49610150)	+	(TGTGTGG)n	Simple_repeat	1	932	(0)	496453
12	15.6	7.3	5.1	chr10	84328520	84328574	(49468848)	+	(GCTGCGC)n	Simple_repeat	1	59	(0)	496706
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
1271	32.0	12.2	4.1	chr10	86082187	86082459	(47714963)	C	L2	LINE/L2	(1935)	1484	1200	498954
487	32.3	13.5	4.7	chr10	86082475	86083099	(47714323)	+	L2b	LINE/L2	2683	3375	(0)	498961
330	24.4	1.5	9.4	chr10	88168429	88168577	(45628845)	C	MER104	DNA/TcMar-Tc2	(13)	168	32	502454
694	29.0	4.8	0.8	chr10	88168669	88168929	(45628493)	+	MLT1J-int	LTR/ERVL-MaLR	1	272	(1115)	502452
24	12.1	0.0	0.0	chr10	88366446	88366481	(45430941)	+	(GT)n	Simple_repeat	1	36	(0)	502733
1503	17.9	5.4	14.9	chr10	88366490	88367040	(45430382)	+	LTR54B	LTR/ERV1	3	498	(0)	502734
18	17.0	5.0	0.0	chr10	88367051	88367090	(45430332)	+	(AT)n	Simple_repeat	1	42	(0)	502735
2960	19.8	8.9	1.7	chr10	88367128	88368140	(45429282)	C	L1ME3A	LINE/L1	(67)	6106	5015	502736
16	27.6	0.0	1.8	chr10	88880176	88880230	(44917192)	+	(CAGAGG)n	Simple_repeat	1	55	(0)	503504
186	23.7	0.0	0.0	chr10	89252186	89252223	(44545199)	+	MIRb	SINE/MIR	203	240	(28)	504103
455	14.3	0.0	0.0	chr10	90571893	90571962	(43225460)	C	L1PA16	LINE/L1	(6761)	92	23	506018
1095	13.2	1.6	2.1	chr10	90571963	90572148	(43225274)	+	MER57B1	LTR/ERV1	217	401	(0)	506019
5331	24.2	6.5	1.8	chr10	90572217	90573638	(43223784)	C	L1MA5	LINE/L1	(4490)	3076	1582	506017
22	21.6	3.1	6.1	chr10	91163256	91163351	(42634071)	+	G-rich	Low_complexity	1	99	(0)	506909
1774	16.7	0.7	0.7	chr10	96935554	96935846	(36861576)	+	AluJr	SINE/Alu	2	294	(18)	517007
357	10.2	0.0	0.0	chr10	96936016	96936064	(36861358)	C	MER57B1	LTR/ERV1	(58)	343	295	517008
535	14.8	6.5	3.4	chr10	96936075	96936193	(36861229)	+	L1M4b	LINE/L1	880	1002	(5865)	517009
1762	16.3	12.2	1.4	chr10	96936193	96936690	(36860732)	+	L1M4b	LINE/L1	3769	4327	(2679)	517009
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
15	20.3	5.9	0.0	chr10	103368447	103368497	(30428925)	+	(CCTCGGCC)n	Simple_repeat	1	54	(0)	528834
9916	11.3	4.5	2.8	chr10	104233864	104236373	(29561049)	+	LTR19-int	LTR/ERV1	2471	5944	(2)	530394
2100	14.4	3.7	1.1	chr10	109062435	109062823	(24734599)	+	MER57C2	LTR/ERV1	1	434	(0)	537465
14	30.7	0.0	0.0	chr10	110008207	110008254	(23789168)	+	(GGC)n	Simple_repeat	1	48	(0)	538775
11327	9.6	0.9	1.1	chr10	110048332	110049605	(23747817)	+	THE1B-int	LTR/ERVL-MaLR	1	1281	(299)	538837
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
1101	22.8	12.4	7.9	chr10	120054196	120054548	(13742874)	+	MER57D	LTR/ERV1	1	383	(28)	555064
1434	15.3	11.7	2.0	chr10	120054549	120054803	(13742619)	C	AluJo	SINE/Alu	(29)	283	1	555065
902	16.1	0.0	0.0	chr10	120359015	120359163	(13438259)	+	L1M1	LINE/L1	4522	4670	(1476)	555517
261	22.7	11.1	3.3	chr10	120359164	120359254	(13438168)	C	MLT1J	LTR/ERVL-MaLR	(31)	531	433	555518
1058	24.5	5.7	4.1	chr10	121678774	121679139	(12118283)	C	MER57E1	LTR/ERV1	(0)	372	1	557537
217	25.0	1.8	0.0	chr10	123234432	123234487	(10562935)	+	L3	LINE/CR1	2958	3014	(1085)	559991
446	33.0	1.0	7.2	chr10	123234611	123234832	(10562590)	+	L2b	LINE/L2	2973	3180	(195)	559992
4904	19.1	3.8	3.5	chr10	123234841	123234885	(10562537)	C	L1M2c	LINE/L1	(4785)	2004	1960	559993
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
35	22.0	5.2	4.3	chr10	132307987	132308140	(1489282)	+	G-rich	Low_complexity	1	162	(0)	571500
16	6.3	9.1	0.0	chr10	133160349	133160381	(637041)	+	(GGCG)n	Simple_repeat	1	36	(0)	572212
2262	9.8	0.0	2.0	chr10	133572457	133572762	(224660)	+	AluSx	SINE/Alu	6	305	(7)	572649
586	26.5	9.8	3.2	chr10	133572783	133572949	(224473)	+	L1M5	LINE/L1	4436	4625	(1521)	572650
1440	19.2	14.6	0.0	chr10	133572950	133573282	(224140)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	572651
586	27.0	9.2	3.5	chr10	133573283	133573492	(223930)	+	L1M5	LINE/L1	4623	4833	(1307)	572650
747	23.5	10.6	3.7	chr10	133573603	133573959	(223463)	+	L1MEg	LINE/L1	1014	1449	(4793)	572652
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
616	17.1	1.7	0.0	chr11	344150	344266	(134742356)	+	HERV1_LTRe	LTR/ERV1	419	537	(0)	573297
1197	19.6	11.1	7.1	chr11	344430	344579	(134742043)	C	MER57E1	LTR/ERV1	(4)	368	206	573298
2436	7.5	0.0	2.2	chr11	344580	344897	(134741725)	+	AluY	SINE/Alu	1	311	(0)	573299
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
12	19.4	0.0	5.1	chr11	2369236	2369274	(132717348)	+	(CCTCC)n	Simple_repeat	1	39	(0)	575736
807	24.6	3.3	2.8	chr11	3167804	3168016	(131918606)	+	MER20	DNA/hAT-Charlie	6	219	(0)	576659
436	27.4	2.8	1.7	chr11	3168181	3168321	(131918301)	C	MIR	SINE/MIR	(19)	243	109	576660
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
400	27.9	14.5	1.3	chr11	9385533	9385681	(125700941)	+	MIRc	SINE/MIR	57	228	(40)	585677
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
757	24.0	7.3	1.4	chr11	10314402	10314608	(124772014)	C	L1MEd	LINE/L1	(6864)	222	3	587356
2179	16.0	0.5	6.3	chr11	10314617	10315042	(124771580)	C	MER57B2	LTR/ERV1	(2)	401	1	587357
772	25.9	5.2	0.0	chr11	12702852	12703052	(122383570)	C	MIR	SINE/MIR	(39)	223	12	591189
210	31.5	8.0	2.0	chr11	12703278	12703429	(122383193)	+	MIRb	SINE/MIR	57	218	(50)	591190
1082	18.6	1.1	0.8	chr11	13819047	13819280	(121267342)	C	MER57D	LTR/ERV1	(2)	409	140	592875
550	32.1	6.8	1.5	chr11	13890198	13890393	(121196229)	C	MIR	SINE/MIR	(30)	232	26	592989
261	35.4	0.0	0.0	chr11	13890420	13890498	(121196124)	+	L2a	LINE/L2	3332	3410	(16)	592990
469	22.7	8.1	1.6	chr11	14029814	14029992	(121056630)	C	MIR	SINE/MIR	(32)	230	47	593213
1139	20.4	13.2	1.1	chr11	14030006	14030292	(121056330)	+	MamTip3	DNA/hAT-Tip100	174	500	(0)	593214
1028	31.1	7.8	1.9	chr11	15152106	15152368	(119934254)	C	LTR16A	LTR/ERVL	(1)	450	176	595009
1031	22.2	12.3	2.1	chr11	15152369	15152695	(119933927)	+	MER57E1	LTR/ERV1	5	369	(3)	595010
1028	31.1	7.8	1.9	chr11	15152696	15152854	(119933768)	C	LTR16A	LTR/ERVL	(276)	175	1	595009
1283	17.6	12.2	0.0	chr11	17887541	17887842	(117198780)	+	L1MC4	LINE/L1	5466	5809	(353)	599491
1967	11.3	5.9	12.6	chr11	17887843	17888207	(117198415)	+	Charlie3	DNA/hAT-Charlie	1	339	(0)	599492
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
12340	12.2	3.9	1.9	chr11	20202827	20206228	(114880394)	+	MER41-int	LTR/ERV1	1952	5772	(174)	603524
8462	11.9	3.8	1.8	chr11	29698420	29699459	(105387163)	C	L1PB1	LINE/L1	(4615)	2248	1193	617406
829	18.8	2.9	2.4	chr11	29699512	29699680	(105386942)	+	MER57E1	LTR/ERV1	203	372	(0)	617405
11	24.9	2.0	3.9	chr11	30585974	30585990	(104500632)	+	(CGGCTCC)n	Simple_repeat	1	51	(0)	618702
14	14.2	0.0	3.0	chr11	30585991	30586023	(104500599)	+	(CCGCCC)n	Simple_repeat	1	33	(0)	618703
23	21.9	1.5	1.5	chr11	30586282	30586346	(104500276)	+	(GAGC)n	Simple_repeat	1	66	(0)	618704
225	33.6	3.6	2.2	chr11	35199748	35199884	(99886738)	C	UCON55	DNA/TcMar-Tigger	(1)	191	53	626396
28	0.0	0.0	0.0	chr11	35199935	35199961	(99886661)	+	(T)n	Simple_repeat	1	27	(0)	626397
17	4.0	0.0	3.6	chr11	35380965	35380992	(99705630)	+	(AAGAA)n	Simple_repeat	1	28	(0)	626683
612	28.6	11.4	3.6	chr11	35381199	35381560	(99705062)	+	MLT1K	LTR/ERVL-MaLR	159	552	(43)	626684
1391	28.1	8.6	1.3	chr11	36976694	36977148	(98109474)	+	MLT1G1	LTR/ERVL-MaLR	82	572	(7)	629248
1067	17.4	5.0	2.8	chr11	44752031	44752375	(90334247)	+	LTR54	LTR/ERV1	1	407	(103)	640776
487	17.1	0.0	0.0	chr11	44752378	44752453	(90334169)	C	AluSz6	SINE/Alu	(8)	304	229	640777
502	10.2	6.1	1.8	chr11	44752454	44752563	(90334059)	+	LTR54	LTR/ERV1	382	496	(2)	640776
17	4.9	0.0	0.0	chr11	44752564	44752584	(90334038)	+	(GT)n	Simple_repeat	1	21	(0)	640778
12	38.4	2.4	1.2	chr11	44752585	44752633	(90333989)	+	(GTAT)n	Simple_repeat	1	72	(0)	640779
1216	21.3	13.7	3.4	chr11	44752634	44753051	(90333571)	C	LTR37B	LTR/ERV1	(0)	468	1	640780
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
17	22.2	0.0	0.0	chr11	47767169	47767210	(87319412)	+	(GTCCGG)n	Simple_repeat	1	42	(0)	646695
20	12.1	0.0	0.0	chr11	47767335	47767370	(87319252)	+	(GGGCGCT)n	Simple_repeat	1	36	(0)	646696
261	31.6	4.9	1.3	chr11	57568015	57568171	(77518451)	C	MamRep1879	DNA/hAT-Tip100?	(49)	167	5	654006
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
670	1.4	0.0	0.0	chr11	59550986	59551059	(75535563)	C	tRNA-Val-GTA	tRNA	(2)	74	1	656946
565	2.7	0.0	14.9	chr11	59551294	59551380	(75535242)	+	tRNA-Arg-AGA	tRNA	1	74	(2)	656947
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
18	14.6	2.0	5.8	chr11	61429397	61429447	(73657175)	+	(GCCCC)n	Simple_repeat	1	52	(0)	660144
11	27.6	0.0	0.0	chr11	61429967	61430005	(73656617)	+	(CCGCCCC)n	Simple_repeat	1	39	(0)	660145
2311	10.3	0.7	0.0	chr11	62107641	62107942	(72978680)	+	AluSz	SINE/Alu	1	304	(8)	661510
194	21.3	2.1	0.0	chr11	62108374	62108420	(72978202)	C	MIRc	SINE/MIR	(212)	56	9	661511
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1936	8.1	6.5	0.0	chr11	62653500	62653758	(72432864)	+	AluSx	SINE/Alu	1	277	(35)	662482
2352	10.7	0.0	0.0	chr11	63944623	63944930	(71141692)	+	AluSz	SINE/Alu	3	310	(2)	664705
15	7.9	9.1	4.2	chr11	63945119	63945162	(71141460)	+	(TGC)n	Simple_repeat	1	48	(0)	664706
14	32.0	0.0	1.7	chr11	64844195	64844254	(70242368)	+	G-rich	Low_complexity	1	60	(0)	666322
13	31.4	0.0	1.8	chr11	67118201	67118257	(67968365)	+	(GCCGGCG)n	Simple_repeat	1	57	(0)	671002
304	24.3	0.0	0.9	chr11	67629552	67629665	(67456957)	C	MIRc	SINE/MIR	(71)	191	86	671999
17	24.9	3.7	3.6	chr11	67629812	67629892	(67456730)	+	(CCGCGG)n	Simple_repeat	1	84	(0)	672000
14	13.8	0.0	5.6	chr11	67629953	67629988	(67456634)	+	(GGCGA)n	Simple_repeat	1	36	(0)	672001
11	16.9	2.9	2.8	chr11	68839232	68839266	(66247356)	+	(CCGCCG)n	Simple_repeat	1	36	(0)	674056
13	22.1	2.3	2.2	chr11	69638351	69638394	(65448228)	+	(CCCCCAG)n	Simple_repeat	1	45	(0)	675425
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
600	27.4	5.3	0.5	chr11	70443651	70443866	(64642756)	+	MLT1D	LTR/ERVL-MaLR	269	495	(10)	676850
2798	6.1	0.0	0.0	chr11	76048899	76049243	(59037379)	+	LTR18C	LTR/ERVL	1	345	(0)	687253
17	9.1	0.0	0.0	chr11	85719506	85719529	(49367093)	+	(T)n	Simple_repeat	1	24	(0)	704259
586	26.9	13.7	1.1	chr11	85719545	85719728	(49366894)	+	L3	LINE/CR1	3886	4096	(3)	704260
1895	11.3	10.4	3.4	chr11	86053168	86053524	(49033098)	+	MER57C1	LTR/ERV1	1	385	(0)	704831
1861	17.2	0.7	0.0	chr11	86053580	86053863	(49032759)	C	AluJb	SINE/Alu	(22)	290	5	704832
455	28.3	8.2	2.0	chr11	86568806	86568953	(48517669)	C	L2b	LINE/L2	(2)	3373	3216	705764
376	31.4	6.9	0.0	chr11	86568979	86569099	(48517523)	+	MIRb	SINE/MIR	131	260	(8)	705765
20	16.4	0.0	0.0	chr11	86636254	86636287	(48450335)	+	(T)n	Simple_repeat	1	34	(0)	705879
250	25.7	8.2	6.5	chr11	86636289	86636396	(48450226)	+	MIRb	SINE/MIR	138	247	(21)	705880
662	28.8	3.8	2.4	chr11	86636626	86636835	(48449787)	+	MIRb	SINE/MIR	3	215	(53)	705881
24	20.3	2.0	0.0	chr11	93197514	93197564	(41889058)	+	(CA)n	Simple_repeat	1	52	(0)	715243
16	17.0	0.0	0.0	chr11	93197794	93197826	(41888796)	+	(CGC)n	Simple_repeat	1	33	(0)	715244
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
463	30.8	8.7	9.8	chr11	94296842	94297251	(40789371)	C	L2c	LINE/L2	(5)	3382	2978	716937
2169	12.6	0.0	0.3	chr11	98542090	98542390	(36544232)	C	AluSx3	SINE/Alu	(11)	300	1	722652
1624	18.8	12.4	3.6	chr11	98542391	98542720	(36543902)	+	LTR54B	LTR/ERV1	120	493	(5)	722651
347	32.9	11.8	2.7	chr11	98542814	98543056	(36543566)	C	L2c	LINE/L2	(235)	3152	2886	722653
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
2198	11.2	3.6	0.0	chr11	102464149	102464469	(32622153)	+	MER1B	DNA/hAT-Charlie	2	334	(5)	727967
13	18.2	0.0	0.0	chr11	113798027	113798057	(21288565)	+	(TACATA)n	Simple_repeat	1	31	(0)	745171
26	0.0	0.0	0.0	chr11	113798067	113798091	(21288531)	+	(T)n	Simple_repeat	1	25	(0)	745172
2718	11.5	0.2	1.5	chr11	115036900	115037305	(20049317)	+	MER57B1	LTR/ERV1	1	401	(0)	747087
1260	24.4	17.1	3.7	chr11	115037306	115037853	(20048769)	+	HAL1	LINE/L1	689	1375	(1090)	747086
189	34.9	4.0	1.7	chr11	118320396	118320567	(16766055)	+	L2c	LINE/L2	2918	3093	(294)	752691
16	17.6	0.0	0.0	chr11	118320568	118320594	(16766028)	+	(T)n	Simple_repeat	1	27	(0)	752692
1753	17.8	5.9	0.3	chr11	118320595	118320932	(16765690)	C	MER57C1	LTR/ERV1	(25)	360	3	752693
41	2.4	0.0	2.3	chr11	118434450	118434493	(16652129)	+	(AG)n	Simple_repeat	1	44	(0)	752904
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
795	30.1	8.1	6.9	chr11	119939530	119940007	(15146615)	+	MLT1H1	LTR/ERVL-MaLR	40	518	(37)	755717
11	24.9	0.0	2.5	chr11	120210851	120210890	(14875732)	+	(GCCCCC)n	Simple_repeat	1	40	(0)	756149
1053	26.1	7.5	3.8	chr11	130543134	130543480	(4543142)	+	MER57E1	LTR/ERV1	12	372	(0)	772067
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
17	18.9	5.4	1.7	chr12	188842	188897	(133086412)	+	(TCCCCA)n	Simple_repeat	1	59	(0)	778357
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
267	29.0	16.9	1.2	chr12	6471272	6471435	(126803874)	+	L2	LINE/L2	2440	2634	(785)	788778
13	28.0	0.0	3.6	chr12	6914395	6914449	(126360860)	+	(CCCCCTC)n	Simple_repeat	1	55	(0)	789639
32	23.2	1.0	3.1	chr12	6914534	6914629	(126360680)	+	(CGC)n	Simple_repeat	1	97	(0)	789640
15	21.4	1.6	6.3	chr12	8697834	8697897	(124577412)	+	(CGCCG)n	Simple_repeat	1	60	(0)	792746
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
13	10.8	3.1	3.0	chr12	12357357	12357388	(120917921)	+	(TCCCTG)n	Simple_repeat	1	33	(0)	798018
393	29.3	4.1	0.8	chr12	15688185	15688301	(117587008)	C	MIRb	SINE/MIR	(51)	217	97	803140
5038	11.5	7.7	0.3	chr12	15688314	15689073	(117586236)	+	LTR1A2	LTR/ERV1	17	837	(0)	803141
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1846	14.2	6.5	0.0	chr12	19025281	19025596	(114249713)	+	MER44A	DNA/TcMar-Tigger	2	339	(0)	807401
2448	11.7	5.8	1.4	chr12	19025597	19025774	(114249535)	+	MER57F	LTR/ERV1	240	435	(0)	807400
2482	14.7	2.2	0.0	chr12	22210737	22211130	(111064179)	+	MER57B2	LTR/ERV1	1	403	(0)	811776
3876	17.9	9.2	3.0	chr12	22211131	22211567	(111063742)	C	MER21B	LTR/ERVL	(401)	467	3	811775
12	10.0	5.6	5.3	chr12	22544213	22544248	(110731061)	+	G-rich	Low_complexity	1	38	(0)	812278
16	13.3	2.7	5.3	chr12	22544266	22544302	(110731007)	+	(GC)n	Simple_repeat	1	38	(0)	812279
1069	27.6	8.7	1.8	chr12	25040843	25041357	(108233952)	C	L2a	LINE/L2	(66)	3360	2807	815876
1579	16.7	12.1	5.8	chr12	30210225	30210626	(103064683)	+	LTR54B	LTR/ERV1	14	453	(45)	823417
1757	16.0	0.0	6.9	chr12	30210627	30210944	(103064365)	+	AluJb	SINE/Alu	1	296	(16)	823418
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
417	22.9	0.9	0.0	chr12	39443880	39443988	(93831321)	+	UCON35	Unknown	10	119	(12)	832453
2070	12.8	1.0	0.7	chr12	45991281	45991576	(87283733)	+	AluSz	SINE/Alu	1	297	(15)	841695
2403	5.2	1.0	2.6	chr12	48717145	48717452	(84557857)	+	AluSx3	SINE/Alu	1	303	(8)	845624
1954	11.8	0.3	4.9	chr12	51026748	51026894	(82248415)	+	AluJb	SINE/Alu	1	139	(173)	850435
2461	5.1	0.7	0.3	chr12	51026895	51027190	(82248119)	+	AluSp	SINE/Alu	1	297	(16)	850436
3492	10.8	2.0	0.8	chr12	51545057	51545540	(81729769)	C	MER1A	DNA/hAT-Charlie	(0)	529	40	851541
2619	24.0	9.2	2.1	chr12	51545561	51546359	(81728950)	C	L1MC4	LINE/L1	(371)	7671	6811	851538
26	18.7	1.6	1.6	chr12	54017343	54017405	(79257904)	+	GA-rich	Low_complexity	1	64	(0)	855760
1348	10.0	0.0	0.0	chr12	54229470	54229639	(79045670)	+	AluSx1	SINE/Alu	134	303	(9)	856086
272	12.2	0.0	0.0	chr12	54998947	54998995	(78276314)	C	MER57B2	LTR/ERV1	(0)	403	355	857234
804	20.4	0.8	0.0	chr12	54999010	54999141	(78276168)	C	FLAM_C	SINE/Alu	(10)	133	1	857235
2081	19.8	2.0	2.2	chr12	54999142	54999540	(78275769)	C	MER57A1	LTR/ERV1	(32)	400	4	857236
16	17.3	2.6	0.0	chr12	56158139	56158177	(77117132)	+	(CCCCCGA)n	Simple_repeat	1	40	(0)	858993
15	20.4	0.0	2.4	chr12	58920321	58920361	(74354948)	+	(CGCTCG)n	Simple_repeat	1	41	(0)	863390
3663	27.4	7.8	12.3	chr12	63104273	63105389	(70169920)	+	L2	LINE/L2	292	1402	(2017)	868980
13	21.4	4.7	0.0	chr12	64404711	64404753	(68870556)	+	(CCGCT)n	Simple_repeat	1	45	(0)	871078
611	24.8	6.1	6.5	chr12	65196629	65196874	(68078435)	C	MER57A-int	LTR/ERV1	(5940)	247	3	872446
1011	20.9	12.4	3.6	chr12	65196879	65197219	(68078090)	C	MER57E1	LTR/ERV1	(0)	372	1	872446
53	14.1	4.5	0.9	chr12	65278446	65278556	(67996753)	+	GA-rich	Low_complexity	1	116	(0)	872573
11	21.5	4.4	2.1	chr12	65278562	65278606	(67996703)	+	(GGCGGCC)n	Simple_repeat	1	47	(0)	872574
29	3.2	0.0	0.0	chr12	65278805	65278836	(67996473)	+	(CTCTGC)n	Simple_repeat	1	32	(0)	872575
19	21.1	2.0	0.0	chr12	65278877	65278925	(67996384)	+	(CTCCC)n	Simple_repeat	1	50	(0)	872576
235	28.3	16.2	3.5	chr12	65590940	65591111	(67684198)	+	MIR	SINE/MIR	11	208	(54)	873014
2973	11.2	0.5	0.2	chr12	65984115	65984545	(67290764)	C	MER57A1	LTR/ERV1	(0)	432	1	873620
1446	20.1	2.1	8.2	chr12	66636755	66636960	(66638349)	+	MLT1B	LTR/ERVL-MaLR	181	386	(4)	874657
1136	24.3	6.0	11.2	chr12	66636961	66637200	(66638109)	+	L1M5	LINE/L1	5501	5766	(476)	874655
22	0.0	0.0	0.0	chr12	67355977	67356000	(65919309)	+	(T)n	Simple_repeat	1	24	(0)	875783
23	0.0	0.0	0.0	chr12	70353914	70353938	(62921371)	+	(A)n	Simple_repeat	1	25	(0)	880769
1009	19.1	0.5	0.5	chr12	72330835	72331023	(60944286)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	883701
1476	21.9	7.9	2.1	chr12	72729344	72729810	(60545499)	+	LTR54B	LTR/ERV1	1	496	(2)	884156
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
17	16.9	2.0	3.9	chr12	76084621	76084670	(57190639)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	888581
519	22.1	2.2	5.1	chr12	76202336	76202473	(57072836)	C	LTR81A	LTR/Gypsy	(1179)	171	38	888837
1665	17.5	9.4	3.2	chr12	76202754	76203101	(57072208)	C	MER57E1	LTR/ERV1	(0)	372	1	888838
2584	3.7	0.3	0.0	chr12	76312884	76313178	(56962131)	+	AluY	SINE/Alu	1	296	(15)	889055
2267	15.7	2.5	1.0	chr12	76426017	76426414	(56848895)	+	MER57D	LTR/ERV1	8	411	(0)	889216
541	28.0	5.8	4.7	chr12	76426440	76426713	(56848596)	+	L1ME3D	LINE/L1	5950	6226	(16)	889217
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
18	15.6	0.0	0.0	chr12	77325016	77325051	(55950258)	+	(CCGCTC)n	Simple_repeat	1	36	(0)	890696
12	15.3	5.3	2.5	chr12	79934885	79934922	(53340387)	+	(CGCTTC)n	Simple_repeat	1	40	(0)	894281
15	21.8	0.0	0.0	chr12	89708841	89708877	(43566432)	+	(GGC)n	Simple_repeat	1	37	(0)	907474
27	23.0	1.4	1.4	chr12	89709271	89709343	(43565966)	+	(CGC)n	Simple_repeat	1	74	(0)	907475
18	12.0	0.0	0.0	chr12	89709389	89709415	(43565894)	+	(GC)n	Simple_repeat	1	27	(0)	907476
11	13.2	5.7	2.7	chr12	89709428	89709462	(43565847)	+	G-rich	Low_complexity	1	37	(0)	907477
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
1169	10.8	3.0	0.2	chr12	92650348	92650562	(40624747)	+	L1MA4A	LINE/L1	6012	6234	(69)	911904
2635	15.0	0.9	0.2	chr12	92650564	92650990	(40624319)	C	MER57A1	LTR/ERV1	(0)	432	3	911905
13	23.6	6.0	0.0	chr12	92929241	92929290	(40346019)	+	(GAGC)n	Simple_repeat	1	53	(0)	912350
645	1.3	0.0	0.0	chr12	96036021	96036095	(37239214)	+	tRNA-Asp-GAY	tRNA	1	75	(0)	918300
195	27.7	9.0	2.9	chr12	96036226	96036329	(37238980)	C	L2c	LINE/L2	(141)	3246	3136	918301
411	31.9	18.2	5.8	chr12	96036419	96036747	(37238562)	C	L2c	LINE/L2	(536)	2883	2488	918301
2658	11.7	2.2	0.5	chr12	96056660	96057063	(37218246)	+	MER57D	LTR/ERV1	1	411	(0)	918340
664	28.2	16.8	4.5	chr12	96057113	96057516	(37217793)	+	MLT1K	LTR/ERVL-MaLR	130	593	(2)	918341
649	2.8	0.0	0.0	chr12	98503503	98503574	(34771735)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	922374
14	21.4	2.2	2.2	chr12	100267187	100267231	(33008078)	+	(CCCCT)n	Simple_repeat	1	46	(0)	925231
15	15.0	5.4	0.0	chr12	100267546	100267582	(33007727)	+	(GGCC)n	Simple_repeat	1	39	(0)	925232
691	26.9	3.9	3.5	chr12	100278928	100279094	(32996215)	C	L1MEc	LINE/L1	(4797)	2753	2549	925245
2235	13.9	0.0	1.4	chr12	100279100	100279443	(32995866)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	925251
410	31.6	8.8	4.2	chr12	100279447	100280225	(32995084)	C	L1MEc	LINE/L1	(5549)	1986	936	925245
543	29.1	1.7	9.3	chr12	108955031	108955130	(24320179)	C	HAL1ME	LINE/L1	(2377)	88	5	941383
233	25.7	3.9	2.6	chr12	109760492	109760567	(23514742)	+	MER102c	DNA/hAT-Charlie	1	77	(254)	943231
211	25.5	20.3	5.6	chr12	110450531	110450569	(22824740)	+	L2a	LINE/L2	3106	3145	(281)	944771
2279	6.2	6.4	0.0	chr12	110450570	110450861	(22824448)	+	AluSx1	SINE/Alu	1	312	(0)	944772
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
460	26.4	12.0	0.1	chr12	113186127	113186312	(20088997)	+	MIRb	SINE/MIR	6	220	(48)	951000
425	26.1	23.8	3.4	chr12	114327185	114327479	(18947830)	+	MLT1J2	LTR/ERVL-MaLR	90	448	(0)	953478
242	21.2	11.0	8.7	chr12	117189442	117189591	(16085718)	+	MIRb	SINE/MIR	4	157	(111)	959735
12	21.1	0.0	0.0	chr12	117189595	117189623	(16085686)	+	(AAC)n	Simple_repeat	1	29	(0)	959736
15	21.0	0.0	0.0	chr12	117189624	117189632	(16085677)	+	(TAACAA)n	Simple_repeat	2	39	(0)	959737
321	30.9	8.0	2.4	chr12	117189634	117189845	(16085464)	C	MIRb	SINE/MIR	(14)	254	30	959738
28	21.0	7.0	2.4	chr12	117190092	117190206	(16085103)	+	G-rich	Low_complexity	1	123	(0)	959739
2216	10.7	0.0	0.7	chr12	117442114	117442403	(15832906)	C	AluSx	SINE/Alu	(23)	289	2	960369
1917	14.7	0.3	5.0	chr12	118011614	118011932	(15263377)	+	AluSx1	SINE/Alu	3	306	(6)	961635
1568	18.1	12.6	5.5	chr12	118011933	118012188	(15263121)	+	LTR54B	LTR/ERV1	145	446	(52)	961634
2351	10.1	0.0	0.3	chr12	118012189	118012495	(15262814)	+	AluSq	SINE/Alu	1	306	(7)	961636
241	20.8	0.0	0.0	chr12	119667518	119667565	(13607744)	+	MER5A	DNA/hAT-Charlie	137	184	(5)	965293
332	32.0	0.0	0.0	chr12	119667578	119667674	(13607635)	C	L2	LINE/L2	(571)	2848	2752	965294
14	19.2	4.8	0.0	chr12	119667740	119667781	(13607528)	+	(GCCTGG)n	Simple_repeat	1	44	(0)	965295
1973	7.5	9.5	0.4	chr12	120325233	120325499	(12949810)	C	AluSz	SINE/Alu	(18)	294	1	966738
323	24.6	9.2	2.5	chr12	120454181	120454301	(12821008)	C	Charlie8	DNA/hAT-Charlie	(2163)	265	140	967123
296	25.8	27.3	0.0	chr12	120454306	120454433	(12820876)	C	MIR	SINE/MIR	(71)	191	16	967124
18	16.8	2.5	0.0	chr12	120687327	120687366	(12587943)	+	(GCT)n	Simple_repeat	1	41	(0)	967692
1269	19.8	10.9	6.0	chr12	120813674	120814022	(12461287)	+	MER57E1	LTR/ERV1	5	372	(0)	967908
323	24.5	4.3	7.7	chr12	120814023	120814141	(12461168)	+	L1MC5a	LINE/L1	2583	2704	(73)	967907
833	26.8	5.4	6.6	chr12	120889283	120889741	(12385568)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	968045
16	23.9	2.9	4.2	chr12	122078733	122078801	(11196508)	+	(CGCCG)n	Simple_repeat	1	71	(0)	971060
20	25.1	2.3	4.5	chr12	122078969	122079055	(11196254)	+	(CCGCG)n	Simple_repeat	1	89	(0)	971061
353	28.1	9.6	0.6	chr12	123634008	123634152	(9641157)	C	L2a	LINE/L2	(2)	3424	3261	974590
15	5.6	0.0	0.0	chr12	124907267	124907285	(8368024)	+	(A)n	Simple_repeat	1	19	(0)	977126
257	21.6	8.8	8.4	chr12	124907309	124907502	(8367807)	+	L1MC5a	LINE/L1	608	810	(82)	977127
2742	10.9	9.1	0.5	chr12	128018748	128019178	(5256131)	+	MER4A1	LTR/ERV1	1	472	(0)	982445
1761	25.3	5.6	5.0	chr12	128019179	128019314	(5255995)	+	L1ME2	LINE/L1	5812	5939	(398)	982441
2683	12.1	1.2	0.0	chr12	128019315	128019710	(5255599)	C	MER57B1	LTR/ERV1	(0)	401	1	982446
2224	19.9	6.1	0.7	chr12	131708818	131709263	(1566046)	C	MER70A	LTR/ERVL	(0)	472	1	988481
460	27.6	5.3	10.8	chr12	131709264	131709352	(1565957)	C	MER57A-int	LTR/ERV1	(6111)	76	3	988480
965	13.6	5.0	0.6	chr12	131709357	131709526	(1565783)	C	MER57D	LTR/ERV1	(0)	411	234	988480
239	24.4	6.8	3.5	chr12	131709517	131709601	(1565708)	C	MER57D	LTR/ERV1	(284)	88	1	988480
336	31.9	16.6	3.5	chr12	131709798	131710145	(1565164)	C	L2a	LINE/L2	(6)	3420	3018	988482
298	29.1	11.7	0.0	chr12	131858400	131858588	(1416721)	C	L2a	LINE/L2	(528)	2891	2678	988703
1965	13.8	1.4	0.0	chr12	132617031	132617305	(658004)	C	AluSx1	SINE/Alu	(33)	279	1	989679
1574	19.4	10.8	4.2	chr12	132617306	132617667	(657642)	C	MER57C2	LTR/ERV1	(33)	401	2	989676
1659	19.2	10.7	5.2	chr12	132617669	132618134	(657175)	+	L1MB5	LINE/L1	5672	6166	(8)	989680
21	6.4	0.0	2.9	chr12	132887158	132887192	(388117)	+	(CCCGGC)n	Simple_repeat	1	35	(0)	990111
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
3692	9.8	7.8	0.2	chr12	133079464	133079975	(195334)	+	MER41A	LTR/ERV1	1	554	(0)	990480
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
690	28.4	5.0	4.0	chr13	19811093	19811185	(94553143)	C	Charlie1a	DNA/hAT-Charlie	(1361)	94	2	993090
597	31.2	9.1	7.2	chr13	19811187	19811404	(94552924)	C	L1MEc	LINE/L1	(5750)	650	433	993104
2130	17.7	4.7	0.5	chr13	19811405	19811796	(94552532)	C	MER57D	LTR/ERV1	(2)	409	1	993105
2077	11.6	0.0	6.0	chr13	19811802	19811938	(94552390)	+	AluSz6	SINE/Alu	1	136	(176)	993106
1917	16.0	1.9	0.0	chr13	19941028	19941333	(94422995)	+	AluSz6	SINE/Alu	1	312	(0)	993448
1333	22.9	8.7	4.0	chr13	19941348	19941720	(94422608)	C	MER57D	LTR/ERV1	(4)	407	16	993449
16	15.3	2.0	6.0	chr13	20127770	20127818	(94236510)	+	(TGAGG)n	Simple_repeat	1	50	(0)	993808
2391	7.2	1.0	0.0	chr13	21094943	21095233	(93269095)	C	AluSg	SINE/Alu	(16)	294	1	995481
238	8.6	0.0	0.0	chr13	21095238	21095272	(93269056)	C	L1ME2z	LINE/L1	(278)	6166	6132	995482
1235	21.3	11.4	3.6	chr13	21095290	21095620	(93268708)	+	MER57E1	LTR/ERV1	13	372	(0)	995483
451	22.9	10.3	0.0	chr13	21095637	21095758	(93268570)	C	L1ME1	LINE/L1	(0)	6179	6044	995484
1903	17.2	0.0	0.0	chr13	21095771	21096061	(93268267)	+	AluJb	SINE/Alu	13	303	(9)	995485
193	32.9	7.9	2.8	chr13	24513181	24513324	(89851004)	C	L2	LINE/L2	(1016)	2403	2252	1000403
821	26.0	14.0	4.8	chr13	25059317	25059651	(89304677)	C	MER57E1	LTR/ERV1	(0)	372	2	1001227
3660	17.9	4.6	0.8	chr13	25059688	25060340	(89303988)	+	LTR58	LTR/ERV1	1	679	(0)	1001228
1171	22.9	8.3	6.3	chr13	27154665	27155066	(87209262)	+	MLT1D	LTR/ERVL-MaLR	1	414	(91)	1004411
2383	8.2	0.0	0.0	chr13	27155067	27155379	(87208949)	C	AluSc8	SINE/Alu	(0)	311	2	1004412
321	21.2	5.9	0.0	chr13	28472509	28472588	(85891740)	C	MamRep1879	DNA/hAT-Tip100?	(91)	125	41	1006800
237	29.5	8.9	3.5	chr13	28472708	28472823	(85891505)	+	MIR3	SINE/MIR	61	183	(25)	1006801
2081	19.3	1.1	3.2	chr13	28472902	28473362	(85890966)	+	L1MB8	LINE/L1	5293	5743	(441)	1006802
2508	7.3	0.0	0.3	chr13	28899409	28899708	(85464620)	C	AluY	SINE/Alu	(11)	300	2	1007487
2281	13.5	4.0	3.5	chr13	28899709	28899868	(85464460)	+	MER57B1	LTR/ERV1	203	362	(39)	1007486
2074	14.4	0.0	2.5	chr13	28899869	28900187	(85464141)	C	AluSz	SINE/Alu	(1)	311	1	1007488
233	27.5	1.2	4.8	chr13	29576860	29576943	(84787385)	C	MIRb	SINE/MIR	(168)	100	20	1008328
1641	17.8	14.1	1.8	chr13	30668386	30668819	(83695509)	+	LTR54B	LTR/ERV1	1	496	(2)	1010164
2226	17.8	1.8	1.0	chr13	30889178	30889575	(83474753)	+	MER57D	LTR/ERV1	11	411	(0)	1010548
16	18.1	5.8	1.8	chr13	32586783	32586834	(81777494)	+	G-rich	Low_complexity	1	55	(0)	1013053
27	19.2	5.1	1.2	chr13	32586968	32587046	(81777282)	+	(GCCGCC)n	Simple_repeat	1	83	(0)	1013055
15	23.9	4.3	6.1	chr13	32587131	32587224	(81777104)	+	G-rich	Low_complexity	1	98	(0)	1013056
661	30.2	9.8	2.3	chr13	32622335	32622815	(81741513)	C	L1ME3A	LINE/L1	(3283)	2863	2343	1013096
3433	19.9	5.2	4.1	chr13	32622831	32623638	(81740690)	C	LTR8B	LTR/ERV1	(20)	800	1	1013111
2635	10.8	3.2	0.3	chr13	33572183	33572570	(80791758)	+	MER57B1	LTR/ERV1	2	401	(0)	1014483
1541	20.9	4.5	0.3	chr13	33572647	33572967	(80791361)	+	MER2B	DNA/TcMar-Tigger	1	335	(1)	1014484
933	19.3	3.9	0.0	chr13	33767286	33767590	(80596738)	C	MER57E1	LTR/ERV1	(0)	372	24	1014787
2112	14.4	0.0	0.7	chr13	33767668	33767966	(80596362)	C	AluSx1	SINE/Alu	(15)	297	1	1014788
828	27.3	7.8	1.2	chr13	33818362	33818761	(80545567)	C	L2a	LINE/L2	(176)	3250	2806	1014882
1660	10.9	7.2	0.4	chr13	34260931	34261227	(80103101)	C	MER57C2	LTR/ERV1	(0)	434	70	1015551
1955	13.6	0.0	0.4	chr13	34261228	34261499	(80102829)	+	AluSz	SINE/Alu	15	285	(27)	1015552
1211	15.1	0.6	0.0	chr13	35930451	35930629	(78433699)	+	AluSx4	SINE/Alu	131	310	(0)	1017829
2059	19.2	0.6	0.0	chr13	35930653	35931017	(78433311)	+	MER57E1	LTR/ERV1	5	371	(1)	1017830
240	19.6	0.0	5.1	chr13	35931204	35931262	(78433066)	C	Charlie3	DNA/hAT-Charlie	(633)	2073	2018	1017831
644	29.8	11.6	4.3	chr13	35931272	35931716	(78432612)	+	L3	LINE/CR1	3262	3743	(356)	1017832
19762	12.0	6.8	0.9	chr13	38091481	38093549	(76270779)	C	MER57A-int	LTR/ERV1	(4003)	2184	1	1020813
2602	12.3	2.5	0.0	chr13	38093550	38093940	(76270388)	C	MER57B1	LTR/ERV1	(0)	401	1	1020813
1211	19.8	3.4	2.1	chr13	38419155	38419442	(75944886)	+	MER57C1	LTR/ERV1	1	292	(93)	1021223
2482	14.1	0.8	0.5	chr13	38419443	38419835	(75944493)	C	MER57B1	LTR/ERV1	(0)	401	8	1021224
19577	12.4	24.9	0.7	chr13	38419838	38420160	(75944168)	C	MER57A-int	LTR/ERV1	(0)	6187	5771	1021224
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
248	15.2	0.0	0.0	chr13	43089829	43089874	(71274454)	C	L1ME3A	LINE/L1	(13)	6160	6115	1028385
564	20.0	0.0	0.0	chr13	43089876	43089975	(71274353)	+	Charlie1a	DNA/hAT-Charlie	102	201	(1254)	1028386
346	19.0	20.2	5.3	chr13	43089988	43090054	(71274274)	+	L1M5	LINE/L1	4930	5005	(1141)	1028387
2115	14.5	4.4	3.2	chr13	43090055	43090460	(71273868)	C	MER57D	LTR/ERV1	(0)	411	1	1028388
2811	10.8	0.8	1.2	chr13	45867298	45867699	(68496629)	+	MER57B1	LTR/ERV1	2	401	(0)	1032982
15	26.2	1.9	1.9	chr13	45867700	45867727	(68496601)	+	(TA)n	Simple_repeat	2	28	(0)	1032983
14796	9.8	7.2	4.6	chr13	49877071	49878126	(64486202)	+	LOR1-int	LTR/ERV1	1343	2395	(5725)	1039242
1917	14.3	5.5	0.0	chr13	49878127	49878419	(64485909)	C	AluSg	SINE/Alu	(0)	310	1	1039246
21	23.8	0.0	5.3	chr13	52450369	52450444	(61913884)	+	(GCCGG)n	Simple_repeat	1	76	(0)	1043131
1574	18.8	4.8	10.1	chr13	54628429	54628954	(59735374)	+	LTR54B	LTR/ERV1	1	497	(1)	1046156
196	38.9	4.0	0.0	chr13	54628995	54629066	(59735262)	C	MER5A	DNA/hAT-Charlie	(72)	117	43	1046157
14	21.2	0.0	7.1	chr13	54629113	54629168	(59735160)	+	A-rich	Low_complexity	1	56	(0)	1046158
56	7.7	0.0	0.0	chr13	57608122	57608191	(56756137)	+	(AT)n	Simple_repeat	1	70	(0)	1049790
2202	14.7	8.6	2.7	chr13	57608192	57608597	(56755731)	C	MER57C2	LTR/ERV1	(2)	432	1	1049791
1129	32.1	8.5	3.1	chr13	61889891	61890960	(52473368)	+	MLT1H1-int	LTR/ERVL-MaLR	201	1390	(19)	1055326
581	25.1	21.7	6.3	chr13	61893320	61893591	(52470737)	+	MSTD	LTR/ERVL-MaLR	1	340	(56)	1055332
1888	12.1	0.0	0.0	chr13	61893592	61893839	(52470489)	C	AluSc5	SINE/Alu	(28)	281	34	1055333
581	25.1	21.7	6.3	chr13	61893840	61893897	(52470431)	+	MSTD	LTR/ERVL-MaLR	341	396	(0)	1055332
3074	14.0	0.8	8.3	chr13	61963734	61964302	(52400026)	C	MER1A	DNA/hAT-Charlie	(0)	529	4	1055417
258	24.2	3.2	16.7	chr13	61964303	61964335	(52399993)	+	L1MA8	LINE/L1	6230	6255	(36)	1055414
2113	17.5	11.7	0.7	chr13	62205065	62205506	(52158822)	C	LOR1a	LTR/ERV1	(0)	497	1	1055698
1783	10.2	2.6	0.4	chr13	63058192	63058458	(51305870)	+	MER51A	LTR/ERV1	361	633	(1)	1056770
758	22.1	3.4	8.2	chr13	63389703	63390033	(50974295)	C	MLT1B	LTR/ERVL-MaLR	(19)	486	106	1057203
2082	15.0	1.0	0.0	chr13	63390034	63390327	(50974001)	C	AluSz6	SINE/Alu	(14)	298	2	1057204
295	38.2	2.4	5.3	chr13	63626611	63626909	(50737419)	C	MLT1M	LTR/ERVL-MaLR	(255)	417	128	1057523
15223	10.0	2.8	1.1	chr13	64119798	64121618	(50242710)	C	L1PA5	LINE/L1	(4320)	1864	4	1058147
2298	29.2	7.4	0.6	chr13	64586583	64587544	(49776784)	C	L1M5	LINE/L1	(1094)	5052	4021	1058717
22380	9.7	1.7	1.2	chr13	65103914	65109618	(49254710)	C	L1PA7	LINE/L1	(4)	6465	702	1059346
1300	20.4	0.9	0.0	chr13	65291160	65291384	(49072944)	C	AluJb	SINE/Alu	(31)	281	55	1059602
1811	8.0	1.3	0.4	chr13	65291748	65291973	(49072355)	+	AluYm1	SINE/Alu	1	228	(83)	1059603
37	33.5	3.1	3.4	chr13	65330212	65330370	(49033958)	+	(AT)n	Simple_repeat	1	157	(0)	1059668
4945	11.9	3.6	1.1	chr13	65330371	65331186	(49033142)	C	LTR1A2	LTR/ERV1	(0)	837	1	1059669
1790	23.9	1.1	4.2	chr13	65963109	65963585	(48400743)	+	MLT1D	LTR/ERVL-MaLR	42	503	(2)	1060448
527	22.8	14.7	3.2	chr13	66067335	66067560	(48296768)	C	MER31B	LTR/ERV1	(244)	241	15	1060582
453	28.7	8.9	4.7	chr13	66067571	66067909	(48296419)	C	L1ME3B	LINE/L1	(651)	5591	5239	1060581
1719	17.1	9.5	5.6	chr13	66387365	66387778	(47976550)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1060968
231	30.3	2.9	0.0	chr13	67069564	67069629	(47294699)	C	Tigger19b	DNA/TcMar-Tigger	(240)	310	243	1061824
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
3614	17.5	17.8	5.7	chr13	67415684	67416618	(46947710)	+	LTR27E	LTR/ERV1	1	1073	(4)	1062246
490	28.1	11.6	4.8	chr13	67416619	67416874	(46947454)	+	L1MEi	LINE/L1	1108	1390	(822)	1062245
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
293	28.8	2.1	8.9	chr13	70204075	70204191	(44160137)	+	L1ME3D	LINE/L1	6073	6123	(0)	1065828
264	34.1	1.6	3.9	chr13	70604363	70604441	(43759887)	+	MamGypsy2-I	LTR/Gypsy	112	186	(3980)	1066354
2108	19.4	3.9	1.6	chr13	70604442	70604891	(43759437)	+	MER65C	LTR/ERV1	1	461	(0)	1066355
616	32.3	8.6	4.0	chr13	71372335	71372711	(42991617)	C	MLT1J1	LTR/ERVL-MaLR	(13)	431	36	1067371
13	12.5	0.0	3.5	chr13	71372777	71372805	(42991523)	+	(ACAT)n	Simple_repeat	1	29	(0)	1067372
3039	12.2	10.2	0.8	chr13	71669163	71669641	(42694687)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1067741
1811	22.0	2.1	1.1	chr13	72344542	72344923	(42019405)	C	MER57D	LTR/ERV1	(0)	411	26	1068664
276	37.0	4.8	0.0	chr13	72781432	72781550	(41582778)	+	MIRc	SINE/MIR	13	137	(131)	1069318
19	12.8	0.0	2.7	chr13	73138656	73138671	(41225657)	+	(AT)n	Simple_repeat	2	17	(0)	1070013
692	26.0	1.5	0.0	chr13	74323025	74323220	(40041108)	+	L1ME1	LINE/L1	5666	5864	(315)	1071815
2109	13.8	1.8	1.5	chr13	74323340	74323677	(40040651)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1071816
13	10.8	3.1	3.0	chr13	74575874	74575905	(39788423)	+	(CCGGC)n	Simple_repeat	1	33	(0)	1072129
15	20.0	6.0	5.7	chr13	75304732	75304814	(39059514)	+	(AGAATG)n	Simple_repeat	1	88	(0)	1073126
248	26.2	13.7	9.4	chr13	75440037	75440196	(38924132)	C	L2c	LINE/L2	(3)	3384	3217	1073330
200	30.1	5.7	10.4	chr13	75440288	75440509	(38923819)	C	L2c	LINE/L2	(474)	2945	2735	1073330
861	23.0	6.5	1.5	chr13	76673505	76673769	(37690559)	+	L1MCa	LINE/L1	862	1140	(5368)	1075055
1000	20.1	4.3	3.9	chr13	76673784	76674062	(37690266)	+	MER57E1	LTR/ERV1	91	370	(2)	1075056
1357	22.4	7.4	4.3	chr13	76674065	76674573	(37689755)	+	L1MCa	LINE/L1	1286	1811	(4697)	1075055
1949	30.8	6.1	6.0	chr13	78055610	78056477	(36307851)	C	L1M4b	LINE/L1	(5893)	974	106	1077017
15	23.9	0.9	4.4	chr13	78603149	78603224	(35761104)	+	G-rich	Low_complexity	1	73	(0)	1077763
20	25.9	1.4	2.7	chr13	78603413	78603484	(35760844)	+	(GCT)n	Simple_repeat	1	73	(0)	1077764
2424	12.3	1.4	1.1	chr13	79621433	79621803	(34742525)	C	MER57E1	LTR/ERV1	(0)	372	1	1079204
3633	12.7	0.4	0.8	chr13	80233649	80234179	(34130149)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1080001
509	20.7	6.7	0.0	chr13	81384519	81384629	(32979699)	C	MER57A-int	LTR/ERV1	(5941)	246	128	1081484
703	26.0	9.4	6.6	chr13	81384751	81385100	(32979228)	C	MER57E1	LTR/ERV1	(0)	372	12	1081484
1762	17.0	3.6	2.6	chr13	83160766	83161086	(31203242)	C	L1MB1	LINE/L1	(1)	6167	5843	1083671
2161	14.3	0.9	1.2	chr13	83161087	83161426	(31202902)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1083672
1363	36.1	4.5	4.2	chr13	83671875	83672981	(30691347)	+	ERVL-E-int	LTR/ERVL	2830	3939	(1728)	1084262
1464	19.7	5.0	0.7	chr13	84654218	84654562	(29709766)	+	MER57D	LTR/ERV1	1	407	(4)	1085524
871	20.1	2.9	2.5	chr13	86548660	86548863	(27815465)	C	MER34B-int	LTR/ERV1	(5980)	207	3	1087879
1941	20.9	0.5	4.9	chr13	86548867	86549318	(27815010)	C	MER57C2	LTR/ERV1	(0)	434	3	1087879
449	22.4	2.7	1.8	chr13	86550636	86550744	(27813584)	C	MER34B-int	LTR/ERV1	(6075)	112	3	1087879
801	12.7	0.0	0.0	chr13	86550748	86550865	(27813463)	C	MER57C2	LTR/ERV1	(0)	434	317	1087879
26	24.9	1.2	2.4	chr13	86550899	86550982	(27813346)	+	A-rich	Low_complexity	1	85	(0)	1087884
1446	23.3	5.7	1.6	chr13	86566521	86566908	(27797420)	+	MLT1A1	LTR/ERVL-MaLR	4	408	(0)	1087906
1695	20.5	3.6	3.2	chr13	86566970	86567382	(27796946)	+	L1M3e	LINE/L1	42	431	(6599)	1087911
1024	13.6	1.3	1.0	chr13	86628309	86628586	(27735742)	C	MER1B	DNA/hAT-Charlie	(0)	339	20	1087992
471	24.8	0.0	4.7	chr13	88895117	88895243	(25469085)	+	MLT2C1	LTR/ERVL	435	555	(8)	1090898
297	25.8	10.1	4.4	chr13	88895258	88895293	(25469035)	C	L1MCb	LINE/L1	(4380)	2371	2341	1090894
7363	19.3	11.2	2.2	chr13	88895294	88896886	(25467442)	+	MER52A	LTR/ERV1	1	1755	(0)	1090899
3017	23.7	2.0	4.5	chr13	89162914	89163138	(25201190)	+	L1MB8	LINE/L1	5434	5650	(528)	1091247
1645	14.2	10.6	1.3	chr13	89163139	89163445	(25200883)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1091249
3017	23.7	2.0	4.5	chr13	89163446	89163902	(25200426)	+	L1MB8	LINE/L1	5651	6097	(81)	1091247
2296	16.5	5.4	0.5	chr13	90846129	90846535	(23517793)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1093454
1650	20.9	0.8	6.4	chr13	90846536	90846902	(23517426)	C	MLT1B	LTR/ERVL-MaLR	(21)	369	24	1093453
1427	20.1	9.5	4.9	chr13	91319419	91319827	(23044501)	+	Tigger2a	DNA/TcMar-Tigger	3	432	(2)	1094100
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
1058	24.7	4.8	5.6	chr13	92590056	92590450	(21773878)	C	MER70C	LTR/ERVL	(139)	392	1	1095768
319	32.7	10.2	0.7	chr13	92735391	92735541	(21628787)	+	MIRb	SINE/MIR	23	189	(79)	1095959
382	36.7	7.5	2.5	chr13	92735662	92735862	(21628466)	+	MIRb	SINE/MIR	38	249	(19)	1095960
273	15.7	0.9	0.0	chr13	93596544	93596598	(20767730)	C	MLT2B4	LTR/ERVL	(0)	562	505	1097101
475	29.0	8.9	3.6	chr13	95745897	95746118	(18618210)	C	MIRb	SINE/MIR	(8)	260	26	1100614
2098	14.4	3.2	4.0	chr13	97712636	97713040	(16651288)	+	MER57D	LTR/ERV1	10	411	(0)	1103387
596	27.2	5.3	5.7	chr13	97713044	97713289	(16651039)	+	MER34B-int	LTR/ERV1	3	247	(5940)	1103387
341	18.5	9.7	0.0	chr13	98083924	98083988	(16280340)	C	MER5A	DNA/hAT-Charlie	(52)	137	66	1104041
2345	10.7	3.2	0.0	chr13	98658955	98659282	(15705046)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1105021
15	19.9	0.0	0.0	chr13	99088641	99088669	(15275659)	+	(T)n	Simple_repeat	1	29	(0)	1105666
42	0.0	0.0	0.0	chr13	99088693	99088728	(15275600)	+	(GT)n	Simple_repeat	1	36	(0)	1105667
1905	16.0	10.1	1.1	chr13	99088730	99089177	(15275151)	C	LTR54B	LTR/ERV1	(3)	495	3	1105668
18	8.7	0.0	0.0	chr13	99864942	99864966	(14499362)	+	(TG)n	Simple_repeat	1	25	(0)	1106958
18	20.9	3.0	4.4	chr13	99980757	99980822	(14383506)	+	GA-rich	Low_complexity	1	68	(0)	1107132
25	22.4	1.3	3.8	chr13	99981084	99981162	(14383166)	+	(CCTCCC)n	Simple_repeat	1	80	(0)	1107133
11	17.0	2.9	2.8	chr13	99981243	99981277	(14383051)	+	(CGAGGC)n	Simple_repeat	1	36	(0)	1107134
1049	26.9	3.2	2.7	chr13	112616990	112617325	(1747003)	+	MER4D	LTR/ERV1	566	903	(0)	1123706
407	28.5	13.1	4.4	chr13	113493743	113494061	(870267)	C	Tigger15a	DNA/TcMar-Tigger	(177)	538	188	1124769
643	0.0	0.0	0.0	chr14	20609336	20609407	(86434311)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1128336
657	1.4	0.0	0.0	chr14	20613399	20613472	(86430246)	C	tRNA-Pro-CCY	tRNA	(1)	74	1	1128342
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
624	2.7	0.0	0.0	chr14	20613790	20613862	(86429856)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	1128344
1183	25.9	12.6	3.4	chr14	21040470	21040966	(86002752)	+	L2a	LINE/L2	2761	3339	(87)	1128990
185	34.8	1.7	4.2	chr14	24242824	24242943	(82800775)	+	MIRc	SINE/MIR	56	172	(96)	1133958
382	24.0	18.4	1.4	chr14	31420929	31421076	(75622642)	C	MIR3	SINE/MIR	(18)	190	12	1143608
1685	17.6	8.7	2.1	chr14	34332196	34332572	(72711146)	+	MER57D	LTR/ERV1	8	411	(0)	1147597
3022	16.2	5.3	9.8	chr14	34332599	34333254	(72710464)	+	MER51A	LTR/ERV1	1	625	(9)	1147598
386	12.9	4.7	0.0	chr14	34981385	34981453	(72062265)	C	AluJb	SINE/Alu	(16)	304	217	1149085
658	9.7	17.3	0.0	chr14	34981451	34981574	(72062144)	+	MER57B1	LTR/ERV1	252	401	(0)	1149086
1090	20.5	25.4	1.5	chr14	34981805	34982265	(72061453)	+	LTR36	LTR/ERV1	1	609	(2)	1149087
2522	14.3	3.5	0.0	chr14	40873695	40874106	(66169612)	+	MER57C2	LTR/ERV1	8	434	(0)	1157375
825	23.8	10.4	10.4	chr14	40874107	40874278	(66169440)	+	L1MD1	LINE/L1	5284	5425	(1119)	1157372
28	23.1	0.0	3.7	chr14	44897468	44897548	(62146170)	+	(GGC)n	Simple_repeat	1	81	(0)	1162310
12	22.7	2.3	2.3	chr14	45426586	45426628	(61617090)	+	A-rich	Low_complexity	1	44	(0)	1163165
186	27.9	13.9	0.0	chr14	45426947	45427014	(61616704)	+	MIRb	SINE/MIR	36	114	(154)	1163166
2558	12.8	3.9	1.4	chr14	47946987	47947300	(59096418)	+	MER57A1	LTR/ERV1	108	432	(0)	1166190
2332	7.0	0.7	0.0	chr14	49687713	49687997	(57355721)	C	AluSc	SINE/Alu	(22)	287	1	1168415
13	29.7	1.5	3.0	chr14	49688218	49688282	(57355436)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1168416
727	27.6	0.0	4.8	chr14	49688658	49688885	(57354833)	C	MIR	SINE/MIR	(13)	249	33	1168417
2707	3.3	0.0	0.0	chr14	49853615	49853914	(57189804)	C	7SLRNA	srpRNA	(20)	300	1	1168757
2379	7.9	1.6	1.0	chr14	49858037	49858341	(57185377)	+	AluSg4	SINE/Alu	1	307	(3)	1168769
2000	15.9	10.7	0.0	chr14	49858355	49858731	(57184987)	+	MER57C2	LTR/ERV1	9	430	(4)	1168770
819	16.2	4.4	5.6	chr14	49858769	49858928	(57184790)	+	AluJo	SINE/Alu	138	295	(17)	1168771
19	11.5	2.6	0.0	chr14	50560764	50560801	(56482917)	+	(GGGCGGC)n	Simple_repeat	1	39	(0)	1170157
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
258	26.8	7.4	2.6	chr14	51069635	51069749	(55973969)	+	MER102b	DNA/hAT-Charlie	98	218	(123)	1170915
3299	17.0	4.0	0.5	chr14	51069858	51070462	(55973256)	+	Tigger17a	DNA/TcMar-Tigger	1	631	(23)	1170916
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
19	16.5	4.4	5.6	chr14	58637753	58637820	(48405898)	+	GA-rich	Low_complexity	1	71	(0)	1182574
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
468	20.7	0.0	0.0	chr14	60165538	60165624	(46878094)	+	AluSz	SINE/Alu	48	134	(178)	1184650
2250	6.9	0.4	0.4	chr14	61188740	61189014	(45854704)	C	AluSq	SINE/Alu	(33)	280	6	1186118
15	18.6	0.0	8.6	chr14	66508442	66508499	(40535219)	+	(CTCCCGG)n	Simple_repeat	1	58	(0)	1194714
767	23.5	12.9	2.5	chr14	67186347	67186630	(39857088)	C	LTR50	LTR/ERVL	(7)	788	471	1195583
489	23.2	13.5	4.5	chr14	67186671	67186880	(39856838)	C	LTR50	LTR/ERVL	(287)	244	19	1195583
413	22.8	16.9	0.6	chr14	67632259	67632421	(39411297)	C	L1MC5	LINE/L1	(2)	9302	9108	1196458
1504	18.6	14.9	6.8	chr14	67632422	67632808	(39410910)	C	MER67C	LTR/ERV1	(246)	465	27	1196459
12	16.6	0.0	0.0	chr14	69879353	69879379	(37164339)	+	(CCCGC)n	Simple_repeat	1	27	(0)	1200349
1018	17.2	3.7	2.3	chr14	70343204	70343417	(36700301)	+	MER57D	LTR/ERV1	189	405	(6)	1201044
3087	15.5	3.9	8.7	chr14	70343777	70344503	(36699215)	C	LTR8	LTR/ERV1	(0)	691	1	1201045
1242	18.2	11.6	4.1	chr14	72409175	72409517	(34634201)	C	MER57E1	LTR/ERV1	(0)	372	1	1204255
2394	9.2	1.4	0.0	chr14	75127470	75127761	(31915957)	+	AluSx1	SINE/Alu	1	296	(16)	1209773
22	36.1	0.0	1.1	chr14	77140345	77140434	(29903284)	+	(TG)n	Simple_repeat	1	90	(0)	1213679
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
13	18.9	4.3	4.1	chr14	79279550	79279596	(27764122)	+	(TCC)n	Simple_repeat	1	49	(0)	1217535
13	13.1	0.0	0.0	chr14	79279599	79279623	(27764095)	+	(GCT)n	Simple_repeat	1	25	(0)	1217536
1949	17.9	6.4	3.5	chr14	79304416	79304837	(27738881)	C	MER57F	LTR/ERV1	(0)	435	1	1217577
1903	16.3	1.7	0.6	chr14	80050278	80050617	(26993101)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	1218673
3350	27.5	4.9	1.9	chr14	80050618	80050869	(26992849)	+	L1ME1	LINE/L1	4924	5168	(1151)	1218667
3107	10.9	0.5	0.0	chr14	80050870	80051299	(26992419)	C	MER57A1	LTR/ERV1	(0)	432	1	1218674
1824	26.0	7.4	1.6	chr14	84910232	84910787	(22132931)	C	L1ME1	LINE/L1	(81)	6098	5508	1225456
2055	17.9	1.9	1.3	chr14	84910796	84911169	(22132549)	C	MER57C1	LTR/ERV1	(9)	376	1	1225457
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
12	18.6	5.4	0.0	chr14	90383659	90383695	(16660023)	+	(TCGCCCT)n	Simple_repeat	1	39	(0)	1233810
2800	12.6	1.9	0.0	chr14	92224467	92224872	(14818846)	+	MER57A1	LTR/ERV1	1	414	(18)	1237137
18	32.2	1.4	1.4	chr14	93376464	93376532	(13667186)	+	(TA)n	Simple_repeat	1	70	(0)	1239383
1553	15.0	13.1	0.7	chr14	93376537	93376824	(13666894)	C	MER57D	LTR/ERV1	(10)	401	73	1239384
2905	17.3	1.7	1.9	chr14	94536612	94537153	(12506565)	C	MER66C	LTR/ERV1	(14)	541	1	1241296
317	25.7	13.4	0.6	chr14	94537194	94537354	(12506364)	C	MIRb	SINE/MIR	(13)	255	69	1241297
3210	18.6	5.9	4.5	chr14	95991757	95992472	(11051246)	C	LTR8A	LTR/ERV1	(0)	727	1	1244065
2241	15.9	6.0	1.3	chr14	95992473	95992665	(11051053)	+	MER57E2	LTR/ERV1	211	402	(0)	1244064
383	28.6	4.9	1.3	chr14	95992811	95992966	(11050752)	C	MER5A	DNA/hAT-Charlie	(7)	182	21	1244066
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
2480	14.5	2.4	1.4	chr14	101089569	101089842	(5953876)	+	MER57F	LTR/ERV1	160	433	(2)	1252726
548	27.7	14.1	3.2	chr14	101089848	101090067	(5953651)	+	MER34B-int	LTR/ERV1	3	250	(5937)	1252726
29	16.8	4.8	5.5	chr14	105248546	105248649	(1795069)	+	G-rich	Low_complexity	1	109	(0)	1259422
14	7.5	3.3	3.2	chr14	105248799	105248828	(1794890)	+	(CGGCG)n	Simple_repeat	1	31	(0)	1259423
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
770	26.8	24.7	1.5	chr15	33993611	33994058	(67997131)	C	L1ME3B	LINE/L1	(38)	6204	5647	1282082
3709	11.7	1.1	0.0	chr15	33994059	33994579	(67996610)	+	MER1A	DNA/hAT-Charlie	3	529	(0)	1282083
4007	11.4	0.3	1.3	chr15	35997434	35997917	(65993272)	+	LTR10C	LTR/ERV1	111	591	(0)	1285110
2113	12.6	1.5	3.8	chr15	35997918	35998115	(65993074)	C	MER1B	DNA/hAT-Charlie	(137)	202	1	1285109
226	21.6	1.9	7.3	chr15	35998137	35998191	(65992998)	C	L3	LINE/CR1	(10)	4089	4038	1285112
12	5.5	0.0	0.0	chr15	50686568	50686586	(51304603)	+	(CTC)n	Simple_repeat	1	19	(0)	1308294
15	6.7	2.9	5.6	chr15	50686809	50686843	(51304346)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1308295
217	27.1	4.7	2.2	chr15	59862654	59862745	(42128444)	C	MIRb	SINE/MIR	(114)	154	59	1322875
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
239	16.3	0.0	0.0	chr15	66857596	66857644	(35133545)	C	L1MC5	LINE/L1	(1667)	7637	7589	1335593
1452	11.7	5.7	0.0	chr15	66857645	66857938	(35133251)	+	MER57F	LTR/ERV1	1	421	(14)	1335597
1487	18.0	6.6	0.0	chr15	66857939	66858221	(35132968)	C	AluJr	SINE/Alu	(9)	303	1	1335598
11	31.8	1.9	0.0	chr15	68818933	68818986	(33172203)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	1339119
232	29.7	2.9	5.6	chr15	71599508	71599614	(30391575)	+	AmnSINE1	SINE/5S-Deu-L2	242	345	(230)	1344016
13	21.7	0.0	7.3	chr15	72272560	72272614	(29718575)	+	G-rich	Low_complexity	1	55	(0)	1345170
382	21.9	15.0	0.0	chr15	72473556	72473674	(29517515)	+	MIRb	SINE/MIR	87	226	(42)	1345545
13	13.1	0.0	0.0	chr15	74291623	74291647	(27699542)	+	(AGGC)n	Simple_repeat	1	25	(0)	1348595
525	25.7	5.3	2.0	chr15	74460877	74461023	(27530166)	C	MIRb	SINE/MIR	(55)	213	62	1348854
19	21.5	1.5	4.5	chr15	74956809	74956873	(27034316)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1349865
14	10.3	3.0	2.9	chr15	74956911	74956943	(27034246)	+	G-rich	Low_complexity	1	34	(0)	1349866
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
14	27.3	3.5	0.0	chr15	75578551	75578607	(26412582)	+	G-rich	Low_complexity	1	59	(0)	1351122
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
273	33.7	6.0	2.8	chr15	77569404	77569580	(24421609)	+	MIR3	SINE/MIR	1	183	(25)	1354273
1993	6.4	2.9	0.8	chr15	78506606	78506873	(23484316)	C	LTR19B	LTR/ERV1	(0)	580	307	1356046
1109	4.4	0.7	0.7	chr15	78506877	78507013	(23484176)	C	AluSx	SINE/Alu	(175)	137	1	1356047
12	20.2	3.5	6.7	chr15	78811266	78811323	(23179866)	+	(GTCCG)n	Simple_repeat	1	60	(0)	1356625
25	11.8	0.0	4.0	chr15	78811423	78811472	(23179717)	+	A-rich	Low_complexity	1	50	(0)	1356626
25	23.8	0.0	3.8	chr15	78811499	78811582	(23179607)	+	(CCCCG)n	Simple_repeat	1	80	(0)	1356627
737	21.5	3.4	3.4	chr15	79340406	79340583	(22650606)	+	MLT1F	LTR/ERVL-MaLR	371	548	(0)	1357699
13	16.8	2.8	2.7	chr15	79562094	79562129	(22429060)	+	(TCTC)n	Simple_repeat	1	37	(0)	1358036
419	28.4	0.4	0.2	chr15	79562243	79562388	(22428801)	+	L1ME4b	LINE/L1	161	288	(610)	1358034
12	4.2	0.0	10.0	chr15	82047140	82047169	(19944020)	+	(CGCCC)n	Simple_repeat	1	30	(0)	1362238
1844	6.1	0.0	2.2	chr15	82067836	82068063	(19923126)	C	AluYc	SINE/Alu	(43)	256	34	1362288
625	29.1	8.1	7.7	chr15	82068227	82068288	(19922901)	+	MamRep4096	DNA/hAT-Tip100	5	62	(364)	1362289
2188	11.5	0.3	0.0	chr15	82068289	82068583	(19922606)	C	AluSq2	SINE/Alu	(17)	296	1	1362290
193	17.1	2.4	4.7	chr15	82371667	82371709	(19619480)	C	L2a	LINE/L2	(14)	3412	3371	1362782
331	27.2	8.8	0.8	chr15	83116411	83116536	(18874653)	C	MIR3	SINE/MIR	(102)	166	30	1364085
2098	16.8	4.2	2.2	chr15	83471336	83471737	(18519452)	+	MER57D	LTR/ERV1	2	411	(0)	1364676
11642	18.1	5.4	4.7	chr15	83471738	83471876	(18519313)	C	L1MD1	LINE/L1	(4805)	1828	1691	1364671
2455	8.8	0.0	0.3	chr15	83471877	83472182	(18519007)	C	AluSx1	SINE/Alu	(6)	306	2	1364677
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
309	26.7	8.2	0.7	chr15	89894364	89894499	(12096690)	C	L1ME3G	LINE/L1	(407)	517	371	1375096
333	29.1	3.8	7.4	chr15	91296292	91296454	(10694735)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	347	1378061
17	5.0	0.0	0.0	chr15	96948060	96948080	(5043109)	+	(T)n	Simple_repeat	1	21	(0)	1386577
23	7.0	0.0	0.0	chr15	96948334	96948363	(5042826)	+	(A)n	Simple_repeat	1	30	(0)	1386578
371	38.2	8.7	2.5	chr15	99275185	99275506	(2715683)	C	L1M4	LINE/L1	(6626)	975	632	1389891
932	24.4	5.5	0.4	chr15	99275532	99275790	(2715399)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	195	1389892
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
14	16.9	0.0	2.9	chr16	352000	352034	(89986311)	+	(CCGGAC)n	Simple_repeat	1	35	(0)	1394625
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
198	25.0	6.4	7.4	chr16	1092180	1092274	(89246071)	+	L2b	LINE/L2	3263	3356	(19)	1395493
13	15.2	0.0	3.2	chr16	1333569	1333599	(89004746)	+	(GCCCC)n	Simple_repeat	1	31	(0)	1395758
695	29.5	12.2	2.8	chr16	1727809	1728313	(88610032)	C	LTR102_Mam	LTR/ERVL	(33)	818	260	1396327
22	14.9	2.2	0.0	chr16	2721287	2721331	(87617014)	+	G-rich	Low_complexity	1	46	(0)	1397806
17	17.8	4.2	6.7	chr16	2721447	2721518	(87616827)	+	(CTCCGC)n	Simple_repeat	1	75	(0)	1397807
323	33.1	1.6	1.6	chr16	2867849	2867971	(87470374)	C	MIR3	SINE/MIR	(76)	132	10	1398063
2030	18.4	0.5	4.5	chr16	2868695	2868829	(87469516)	+	MER63B	DNA/hAT-Blackjack	33	151	(285)	1398064
15	21.8	0.0	8.7	chr16	3028141	3028215	(87310130)	+	(CGGCG)n	Simple_repeat	1	68	(0)	1398353
13	8.8	0.0	12.8	chr16	3028306	3028352	(87309993)	+	(CCCGC)n	Simple_repeat	1	47	(0)	1398354
1376	14.1	8.5	7.9	chr16	3457164	3457454	(86880891)	+	AluJb	SINE/Alu	1	293	(19)	1399215
2183	8.6	0.7	0.3	chr16	4350410	4350699	(85987646)	C	AluSx3	SINE/Alu	(20)	291	1	1400991
25	15.6	3.5	0.0	chr16	4351130	4351186	(85987159)	+	(GGCGCCC)n	Simple_repeat	1	59	(0)	1400992
12	12.6	2.5	7.3	chr16	5092202	5092241	(85246104)	+	G-rich	Low_complexity	1	41	(0)	1402547
284	21.2	25.9	3.5	chr16	19094910	19095053	(71243292)	C	MamRep137	DNA/TcMar?	(20)	490	315	1432676
2571	12.7	2.5	0.0	chr16	19095056	19095448	(71242897)	C	MER57B2	LTR/ERV1	(0)	403	1	1432677
2065	15.7	0.0	0.0	chr16	19566214	19566513	(70771832)	+	AluSx	SINE/Alu	1	300	(12)	1433844
2723	10.3	0.8	5.7	chr16	19566514	19566752	(70771593)	C	MER57B1	LTR/ERV1	(18)	383	164	1433843
2346	8.7	1.0	0.7	chr16	19566753	19567051	(70771294)	C	AluSq2	SINE/Alu	(13)	300	1	1433845
25	12.3	0.0	2.1	chr16	25015438	25015484	(65322861)	+	(GCCGA)n	Simple_repeat	1	47	(0)	1446014
2124	10.9	1.0	1.0	chr16	25015629	25015932	(65322413)	+	AluSx1	SINE/Alu	2	305	(7)	1446015
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
190	27.1	11.4	0.0	chr16	28212334	28212403	(62125942)	C	L2b	LINE/L2	(0)	3375	3297	1452867
14	21.2	4.5	0.0	chr16	30377710	30377753	(59960592)	+	G-rich	Low_complexity	1	46	(0)	1457879
11	19.2	9.1	1.7	chr16	30400368	30400422	(59937923)	+	(CCCGGACA)n	Simple_repeat	1	60	(0)	1457932
2181	11.0	0.7	1.0	chr16	30558833	30559140	(59779205)	+	AluSx	SINE/Alu	6	312	(0)	1458331
187	8.0	0.0	0.0	chr16	30897313	30897337	(59441008)	+	MIR1_Amn	SINE/MIR	126	150	(80)	1459129
370	16.9	1.9	1.4	chr16	30897576	30897657	(59440688)	+	Tigger3b	DNA/TcMar-Tigger	1	86	(262)	1459130
1401	11.9	0.0	0.5	chr16	30897658	30897850	(59440495)	+	AluJb	SINE/Alu	87	278	(34)	1459131
464	33.0	2.6	1.6	chr16	30941809	30941996	(59396349)	C	MIRc	SINE/MIR	(61)	207	18	1459254
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
339	20.6	3.1	0.0	chr16	34064296	34064358	(56273987)	+	AluYh9	SINE/Alu	224	288	(23)	1463564
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
4663	24.8	7.8	2.5	chr16	47569923	47572499	(42765846)	C	L1PB3	LINE/L1	(4192)	3017	15	1467342
1549	18.2	2.6	0.0	chr16	48366908	48367170	(41971175)	C	AluJb	SINE/Alu	(13)	299	30	1468611
2645	13.2	5.5	0.7	chr16	48559472	48559884	(41778461)	+	MER57C2	LTR/ERV1	1	434	(0)	1469020
255	25.4	7.5	1.3	chr16	48559977	48560083	(41778262)	C	MIRc	SINE/MIR	(128)	140	9	1469021
272	32.9	5.1	4.2	chr16	49289325	49289537	(41048808)	+	MIR	SINE/MIR	5	219	(43)	1470281
1980	13.8	6.2	5.1	chr16	50587705	50588039	(39750306)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1472788
2140	13.8	10.3	0.0	chr16	50724370	50724752	(39613593)	C	MER57C2	LTR/ERV1	(0)	434	8	1473066
560	31.1	4.0	10.6	chr16	50724756	50725263	(39613082)	C	MLT1J	LTR/ERVL-MaLR	(15)	497	25	1473067
21	23.1	3.3	0.0	chr16	51151701	51151761	(39186584)	+	(CCCT)n	Simple_repeat	1	63	(0)	1473829
1783	14.4	5.3	4.5	chr16	53154497	53154831	(37183514)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	1477366
1262	18.8	2.9	1.5	chr16	64588147	64588443	(25749902)	+	MER57D	LTR/ERV1	132	434	(0)	1496602
9685	12.2	2.2	5.7	chr16	68997798	68998449	(21339896)	C	MER41-int	LTR/ERV1	(0)	5946	5280	1504842
2312	14.0	7.8	1.0	chr16	69904873	69905255	(20433090)	+	MER57D	LTR/ERV1	1	411	(0)	1506848
1847	15.8	5.1	0.3	chr16	75526410	75526764	(14811581)	C	MER57C1	LTR/ERV1	(0)	385	13	1516991
884	21.9	1.9	0.0	chr16	78163876	78164085	(12174260)	C	MER20	DNA/hAT-Charlie	(0)	219	6	1521244
1910	17.5	0.0	0.0	chr16	78924913	78925215	(11413130)	+	AluJb	SINE/Alu	1	303	(9)	1522668
3268	13.9	2.5	1.5	chr16	79448813	79449336	(10889009)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1523579
3552	15.7	4.2	6.6	chr16	79449337	79449458	(10888887)	+	Tigger1	DNA/TcMar-Tigger	2305	2418	(0)	1523577
19	19.2	0.0	0.0	chr16	79770190	79770225	(10568120)	+	(GT)n	Simple_repeat	1	36	(0)	1524121
15	10.0	0.0	0.0	chr16	79770262	79770283	(10568062)	+	(GT)n	Simple_repeat	1	22	(0)	1524121
13	17.6	0.0	6.8	chr16	79770540	79770583	(10567762)	+	(CCCGC)n	Simple_repeat	1	44	(0)	1524122
18	15.5	0.0	0.0	chr16	79770586	79770615	(10567730)	+	A-rich	Low_complexity	1	30	(0)	1524123
2115	11.5	0.0	0.0	chr16	81428762	81429040	(8909305)	C	AluSx1	SINE/Alu	(18)	294	16	1527249
409	28.6	0.0	0.0	chr16	87777617	87777728	(2560617)	+	L1MC	LINE/L1	5406	5517	(816)	1539045
1962	11.4	4.8	0.0	chr16	87866940	87867219	(2471126)	C	AluSx	SINE/Alu	(18)	294	1	1539199
2528	6.1	0.3	0.6	chr16	87867834	87868145	(2470200)	+	AluY	SINE/Alu	1	311	(0)	1539200
719	11.3	0.9	0.8	chr16	89817057	89817172	(521173)	+	FLAM_C	SINE/Alu	6	117	(16)	1541909
2472	5.4	0.0	0.0	chr16	89948269	89948562	(389783)	C	AluY	SINE/Alu	(17)	294	1	1542143
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
242	25.7	1.4	0.0	chr17	5281840	5281909	(77975532)	C	MIRc	SINE/MIR	(144)	124	54	1554824
14	0.0	0.0	0.0	chr17	5282377	5282394	(77975047)	+	(GGC)n	Simple_repeat	1	18	(0)	1554825
581	28.4	14.2	6.5	chr17	6647910	6648324	(76609117)	+	L3	LINE/CR1	3248	3699	(400)	1557460
596	28.6	4.5	2.1	chr17	6648387	6648655	(76608786)	C	MER102b	DNA/hAT-Charlie	(48)	282	2	1557461
524	28.1	16.1	1.1	chr17	6648665	6648937	(76608504)	+	L3	LINE/CR1	3776	4097	(2)	1557460
23	21.9	1.9	7.5	chr17	7404780	7404883	(75852558)	+	(GGCG)n	Simple_repeat	1	106	(0)	1558788
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
2526	5.0	1.0	0.0	chr17	8682019	8682318	(74575123)	C	AluY	SINE/Alu	(8)	303	1	1561238
570	30.5	0.7	1.3	chr17	12806619	12806771	(70450670)	+	MIR	SINE/MIR	15	166	(96)	1568693
1785	18.4	2.4	5.7	chr17	12806772	12807156	(70450285)	C	MER57E1	LTR/ERV1	(0)	372	1	1568694
2809	22.0	5.2	3.2	chr17	13181136	13181627	(70075814)	+	L1ME3	LINE/L1	5234	5714	(448)	1569361
1795	15.0	12.2	1.6	chr17	13181628	13182068	(70075373)	C	LTR54B	LTR/ERV1	(4)	494	1	1569362
747	24.1	3.3	5.3	chr17	14417221	14417465	(68839976)	C	MER31-int	LTR/ERV1	(5942)	245	6	1571394
2009	12.8	13.4	4.1	chr17	14417472	14417863	(68839578)	C	MER57C2	LTR/ERV1	(0)	434	1	1571394
729	30.1	1.8	1.8	chr17	15495262	15495535	(67761906)	+	Charlie25	DNA/hAT-Charlie	1447	1720	(804)	1573151
1755	18.8	8.6	0.0	chr17	15495707	15496046	(67761395)	+	MER57E1	LTR/ERV1	1	372	(0)	1573152
252	28.0	9.5	7.1	chr17	15496151	15496304	(67761137)	+	MamGypLTR2c	LTR/Gypsy	422	579	(489)	1573153
17	7.0	0.0	5.9	chr17	15651820	15651853	(67605588)	+	(CTCAGG)n	Simple_repeat	1	34	(0)	1573445
1906	12.5	12.7	0.0	chr17	16297839	16298134	(66959307)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1574637
11	21.8	0.0	4.9	chr17	17591984	17592024	(65665417)	+	G-rich	Low_complexity	1	41	(0)	1576914
258	30.2	24.1	0.8	chr17	17592241	17592614	(65664827)	C	L2a	LINE/L2	(1)	3425	2937	1576915
2274	9.1	0.0	1.1	chr17	17923116	17923402	(65334039)	+	AluSq2	SINE/Alu	1	284	(29)	1577579
2408	19.8	11.1	4.3	chr17	20053400	20053928	(63203513)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	1581855
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26937237	26937936	(56319505)	+	(GAATG)n	Satellite	5	705	(0)	1585990
395	19.4	1.6	0.0	chr17	26937941	26938002	(56319439)	+	AluSc	SINE/Alu	223	285	(24)	1585991
1545	18.6	0.5	0.9	chr17	26938006	26938444	(56318997)	+	(GAATG)n	Satellite	3	440	(0)	1585992
202	26.5	5.5	0.0	chr17	27890784	27890851	(55366590)	C	L3	LINE/CR1	(1624)	2475	2404	1587614
2504	8.7	0.0	0.0	chr17	28742791	28743102	(54514339)	+	AluSx1	SINE/Alu	1	312	(0)	1589231
18	23.6	2.2	6.5	chr17	29930050	29930066	(53327375)	+	G-rich	Low_complexity	1	87	(0)	1591635
17	26.2	4.4	0.0	chr17	29930067	29930134	(53327307)	+	(GGAGCGG)n	Simple_repeat	1	71	(0)	1591636
293	30.1	7.9	5.9	chr17	30534327	30534548	(52722893)	C	MIRb	SINE/MIR	(0)	268	42	1592725
4476	2.8	0.0	0.0	chr17	32821864	32822401	(50435040)	+	L1PA5	LINE/L1	5482	6019	(135)	1597471
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
2620	11.0	10.5	1.5	chr17	35285100	35285488	(47971953)	C	MER57C2	LTR/ERV1	(4)	430	3	1602036
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
187	33.1	6.1	6.7	chr17	42773138	42773257	(40484184)	+	MIR1_Amn	SINE/MIR	6	118	(90)	1616344
1299	14.6	17.4	3.1	chr17	43309487	43309740	(39947701)	+	AluJr4	SINE/Alu	3	300	(12)	1617568
217	33.3	9.2	3.6	chr17	43309758	43309869	(39947572)	+	MIR3	SINE/MIR	27	145	(63)	1617569
1953	12.5	0.0	5.3	chr17	43310054	43310251	(39947190)	C	AluJr4	SINE/Alu	(14)	298	112	1617570
19	24.2	5.8	2.2	chr17	45019079	45019166	(38238275)	+	(GCGGC)n	Simple_repeat	1	91	(0)	1621190
17	22.2	2.9	4.3	chr17	45019336	45019403	(38238038)	+	(GCGG)n	Simple_repeat	1	70	(0)	1621191
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
15	14.2	10.7	1.6	chr17	47650121	47650176	(35607265)	+	(ACCCC)n	Simple_repeat	1	62	(0)	1626489
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
219	26.8	5.3	1.4	chr17	49880857	49880928	(33376513)	C	MIRc	SINE/MIR	(109)	159	85	1630747
766	18.1	7.2	8.5	chr17	50309291	50309514	(32947927)	+	MER57E1	LTR/ERV1	1	221	(151)	1631526
401	23.7	10.6	0.8	chr17	50309509	50309627	(32947814)	+	MER110A	LTR/ERV1	72	203	(265)	1631527
515	24.2	2.9	0.8	chr17	50309689	50309821	(32947620)	+	MER57E1	LTR/ERV1	207	342	(30)	1631526
2195	9.2	0.0	4.6	chr17	50309828	50309983	(32947458)	C	AluSx	SINE/Alu	(23)	289	134	1631528
2416	9.3	0.0	0.0	chr17	50309984	50310284	(32947157)	C	AluYk4	SINE/Alu	(9)	302	2	1631529
2331	9.5	1.0	0.0	chr17	50648833	50649128	(32608313)	+	AluSz	SINE/Alu	1	299	(13)	1632178
2207	15.2	0.5	0.8	chr17	50649155	50649546	(32607895)	C	MER57C2	LTR/ERV1	(0)	434	44	1632179
2820	10.0	1.7	0.5	chr17	54368877	54369287	(28888154)	+	MER57C2	LTR/ERV1	1	416	(18)	1637984
942	34.4	5.3	1.6	chr17	54369356	54369807	(28887634)	+	MamRep137	DNA/TcMar-Tigger	13	482	(28)	1637985
182	23.1	9.7	9.7	chr17	56039148	56039219	(27218222)	C	L2c	LINE/L2	(27)	3360	3289	1640651
17	18.0	1.5	8.7	chr17	56978024	56978091	(26279350)	+	(CCCAGC)n	Simple_repeat	1	69	(0)	1642369
23	17.4	2.4	7.1	chr17	56978092	56978102	(26279339)	+	(CCGCC)n	Simple_repeat	4	84	(0)	1642370
16	31.3	5.3	0.0	chr17	56978129	56978222	(26279219)	+	(CTGCTG)n	Simple_repeat	1	99	(0)	1642371
900	19.5	1.7	0.0	chr17	57911082	57911255	(25346186)	C	MER5A	DNA/hAT-Charlie	(0)	189	13	1644097
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
1006	28.7	3.8	5.5	chr17	59508068	59508312	(23749129)	+	MLT1K	LTR/ERVL-MaLR	268	504	(91)	1647397
1964	19.1	10.1	0.2	chr17	59508313	59508759	(23748682)	+	LTR54B	LTR/ERV1	1	496	(2)	1647399
1006	28.7	3.8	5.5	chr17	59508760	59508801	(23748640)	+	MLT1K	LTR/ERVL-MaLR	505	544	(51)	1647397
2227	11.0	1.3	0.0	chr17	59508810	59509109	(23748332)	+	AluSp	SINE/Alu	1	304	(9)	1647400
2207	13.9	0.6	6.1	chr17	60176723	60177081	(23080360)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1648736
15	28.3	0.0	1.9	chr17	60600533	60600585	(22656856)	+	(CGC)n	Simple_repeat	1	53	(0)	1649630
2106	14.2	2.7	0.3	chr17	63124653	63124983	(20132458)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1654280
329	33.3	9.6	0.0	chr17	64145456	64145587	(19111854)	C	MIRb	SINE/MIR	(113)	155	10	1655999
15	28.8	1.9	6.5	chr17	64975604	64975708	(18281733)	+	(ACGCC)n	Simple_repeat	1	107	(0)	1657692
2324	10.0	0.7	0.0	chr17	64976251	64976560	(18280881)	C	AluSx1	SINE/Alu	(0)	312	1	1657693
2501	2.3	0.4	0.0	chr17	68771624	68771888	(14485553)	+	AluYg6	SINE/Alu	44	309	(2)	1664777
16	9.6	0.0	0.0	chr17	71440411	71440433	(11817008)	+	(TC)n	Simple_repeat	1	23	(0)	1668796
1885	17.0	0.6	0.0	chr17	71842913	71843242	(11414199)	+	MER57E1	LTR/ERV1	39	370	(2)	1669395
698	27.2	12.9	5.2	chr17	71843247	71843672	(11413769)	+	MLT1H	LTR/ERVL-MaLR	86	549	(0)	1669394
266	36.0	1.0	0.0	chr17	74301267	74301366	(8956075)	+	MER91B	DNA/hAT-Tip100	37	137	(53)	1673886
531	29.4	9.2	4.0	chr17	77086824	77087121	(6170320)	+	Tigger13a	DNA/TcMar-Tigger	122	436	(335)	1679413
121	22.7	0.4	8.2	chr17	80929972	80930312	(2327129)	+	(CTCAG)n	Simple_repeat	1	313	(0)	1685673
32	10.5	0.0	6.5	chr17	80930313	80930405	(2327036)	+	(CAGCT)n	Simple_repeat	1	93	(0)	1685674
121	22.7	0.4	8.2	chr17	80930406	80930537	(2326904)	+	(CTCAG)n	Simple_repeat	4	127	(0)	1685675
659	22.5	4.4	1.7	chr17	81792544	81793663	(1463778)	+	(CA)n	Simple_repeat	1	1175	(0)	1686733
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
659	22.5	4.4	1.7	chr17	81793921	81794546	(1462895)	+	(CA)n	Simple_repeat	1	626	(0)	1686735
30	23.3	4.0	4.6	chr17	81927396	81927521	(1329920)	+	(GCC)n	Simple_repeat	1	131	(0)	1686916
36	25.6	2.4	5.4	chr17	81927535	81927698	(1329743)	+	G-rich	Low_complexity	1	168	(0)	1686917
15	0.0	0.0	0.0	chr17	81927701	81927719	(1329722)	+	(CCG)n	Simple_repeat	1	19	(0)	1686918
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
2192	24.2	3.9	0.0	chr17	82766660	82767197	(490244)	C	MER68	LTR/ERVL	(0)	563	4	1688223
1413	15.4	0.4	1.6	chr17	82767431	82767674	(489767)	C	AluSx	SINE/Alu	(5)	307	67	1688224
1390	21.8	7.9	1.4	chr17	83246582	83247135	(10306)	C	L1MC	LINE/L1	(2239)	5546	4952	1688732
167	14.0	0.3	2.0	chr17	83247136	83247436	(10005)	+	(GTTAGG)n	Simple_repeat	1	302	(0)	1688733
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
632	31.7	8.9	6.9	chr18	3441327	3441399	(76931886)	C	L1M5	LINE/L1	(1038)	5108	5035	1694415
1055	17.9	0.9	5.4	chr18	3441400	3441623	(76931662)	C	MER20	DNA/hAT-Charlie	(4)	215	2	1694416
632	31.7	8.9	6.9	chr18	3441624	3442261	(76931024)	C	L1M5	LINE/L1	(1112)	5034	4381	1694415
762	19.3	0.0	1.5	chr18	3585662	3585796	(76787489)	+	FLAM_C	SINE/Alu	1	133	(10)	1694698
283	23.9	14.4	8.9	chr18	6577008	6577131	(73796154)	+	Charlie7	DNA/hAT-Charlie	1	132	(2480)	1698749
1103	14.4	10.6	1.3	chr18	6577100	6577338	(73795947)	C	LTR54B	LTR/ERV1	(5)	493	230	1698750
413	12.1	7.0	0.0	chr18	6577341	6577406	(73795879)	C	LTR54B	LTR/ERV1	(405)	93	23	1698750
2093	15.5	5.1	6.9	chr18	6577407	6577765	(73795520)	C	MSTC	LTR/ERVL-MaLR	(0)	428	75	1698751
90	32.7	0.0	0.7	chr18	6729310	6729597	(73643688)	+	(AC)n	Simple_repeat	1	288	(0)	1698977
375	9.6	14.1	0.0	chr18	8308026	8308098	(72065187)	C	L1MB3	LINE/L1	(0)	6183	6099	1701195
1648	12.6	1.5	3.8	chr18	8308099	8308363	(72064922)	C	MER57D	LTR/ERV1	(0)	411	153	1701196
1242	16.9	1.8	0.5	chr18	9431053	9431272	(70942013)	+	Tigger4b	DNA/TcMar-Tigger	139	361	(0)	1703005
874	15.1	21.0	0.0	chr18	9431428	9431745	(70941540)	C	MER57E1	LTR/ERV1	(0)	372	6	1703006
1677	6.6	2.8	0.5	chr18	21703974	21704186	(58669099)	C	AluSx1	SINE/Alu	(94)	218	1	1713145
13	16.0	8.6	5.3	chr18	21704403	21704490	(58668795)	+	(CCCTGCG)n	Simple_repeat	1	90	(0)	1713146
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
22	18.8	5.1	3.7	chr18	22169335	22169412	(58203873)	+	(CTCCC)n	Simple_repeat	1	82	(0)	1714086
1127	21.8	9.0	9.5	chr18	23406408	23406800	(56966485)	+	MER57D	LTR/ERV1	1	397	(14)	1716126
1849	16.8	0.3	1.6	chr18	23406801	23407109	(56966176)	C	AluJr	SINE/Alu	(7)	305	1	1716127
491	22.4	11.2	2.0	chr18	26089740	26089885	(54283400)	+	L2c	LINE/L2	3227	3387	(0)	1720303
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
946	16.7	3.9	0.0	chr18	26161602	26161751	(54211534)	+	FAM	SINE/Alu	11	166	(19)	1720414
478	27.9	1.3	1.3	chr18	26161759	26161907	(54211378)	C	ERVL-E-int	LTR/ERVL	(1210)	4444	4296	1720413
2075	13.2	2.8	3.7	chr18	26162036	26162437	(54210848)	C	L1MA7	LINE/L1	(12)	6279	5882	1720415
2368	14.7	1.2	0.8	chr18	29007848	29008245	(51365040)	+	MER57B1	LTR/ERV1	2	401	(0)	1724478
2782	19.9	3.4	9.2	chr18	29008246	29008842	(51364443)	C	MER4D	LTR/ERV1	(192)	711	61	1724477
5281	11.0	1.3	7.4	chr18	29970945	29971530	(50401755)	C	LTR1A2	LTR/ERV1	(0)	837	276	1725707
26	0.0	6.2	0.0	chr18	29971531	29971562	(50401723)	+	(TGTT)n	Simple_repeat	1	34	(0)	1725708
2160	11.1	0.4	0.0	chr18	29971563	29971842	(50401443)	C	AluSx	SINE/Alu	(31)	281	1	1725709
4027	16.7	14.7	2.8	chr18	30089086	30089940	(50283345)	+	LTR28B	LTR/ERV1	1	974	(0)	1725859
2910	11.8	2.1	0.0	chr18	30766208	30766629	(49606656)	C	MER57A1	LTR/ERV1	(0)	432	2	1726776
15	12.0	0.0	0.0	chr18	31042243	31042269	(49331016)	+	(ACC)n	Simple_repeat	1	27	(0)	1727132
13	22.6	0.0	4.4	chr18	31042994	31043038	(49330247)	+	(CCCCG)n	Simple_repeat	1	45	(0)	1727133
18	25.0	0.0	3.3	chr18	32470449	32470508	(47902777)	+	(CCG)n	Simple_repeat	1	60	(0)	1729399
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
562	36.5	4.5	4.1	chr18	33413538	33413936	(46959349)	+	L1MEg	LINE/L1	1346	1687	(5646)	1730689
189	35.8	4.3	0.0	chr18	33567579	33567645	(46805640)	C	L2b	LINE/L2	(36)	3339	3270	1730891
1134	19.6	1.4	0.4	chr18	33567689	33567964	(46805321)	+	L1ME1	LINE/L1	1290	1568	(4832)	1730892
1969	28.1	1.2	3.7	chr18	33568005	33568768	(46804517)	+	L1ME1	LINE/L1	4786	5530	(789)	1730892
22	24.6	3.2	0.0	chr18	35267705	35267766	(45105519)	+	(AT)n	Simple_repeat	1	64	(0)	1733077
7720	19.0	5.7	7.2	chr18	35283355	35285138	(45088147)	C	MER52A	LTR/ERV1	(0)	1755	1	1733106
304	12.5	0.0	3.5	chr18	35285143	35285200	(45088085)	+	Alu	SINE/Alu	246	301	(0)	1733107
1396	18.6	8.2	2.9	chr18	35297121	35297468	(45075817)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	23	1733122
502	25.8	2.5	8.9	chr18	35297517	35297818	(45075467)	+	L1ME3E	LINE/L1	5934	6215	(27)	1733121
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
429	27.0	9.1	8.7	chr18	35973081	35973595	(44399690)	+	L2-1_AMi	LINE/L2	141	657	(578)	1734075
4122	20.7	3.7	5.3	chr18	39232926	39233917	(41139368)	C	LTR1D	LTR/ERV1	(0)	975	1	1738431
2456	11.0	1.8	3.1	chr18	46067521	46067884	(34305401)	+	MER57C1	LTR/ERV1	15	381	(4)	1747920
909	18.6	14.4	2.9	chr18	46068041	46068284	(34305001)	+	MER2	DNA/TcMar-Tigger	1	277	(68)	1747922
3550	20.7	3.3	2.9	chr18	46965076	46965927	(33407358)	C	HSMAR2	DNA/TcMar-Mariner	(1)	1301	447	1749559
1599	16.5	12.5	0.9	chr18	47547943	47548267	(32825018)	C	MER57E1	LTR/ERV1	(0)	372	5	1750392
1321	22.4	4.1	2.5	chr18	50747725	50748085	(29625200)	+	MER57E1	LTR/ERV1	5	371	(1)	1755675
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
38	14.6	0.0	0.0	chr18	55322075	55322135	(25051150)	+	(T)n	Simple_repeat	1	61	(0)	1762523
363	23.8	0.0	1.2	chr18	59402832	59402912	(20970373)	C	MIRc	SINE/MIR	(107)	161	82	1768893
585	25.9	12.5	1.1	chr18	61771968	61772158	(18601127)	+	MLT1F	LTR/ERVL-MaLR	5	220	(328)	1772425
704	25.2	7.1	2.2	chr18	61772161	61772428	(18600857)	C	L1MEd	LINE/L1	(5869)	1234	953	1772421
2263	14.4	1.3	5.8	chr18	61772429	61772821	(18600464)	C	MER57B2	LTR/ERV1	(0)	403	5	1772426
863	31.3	11.4	2.9	chr18	61772835	61773348	(18599937)	C	L1MEd	LINE/L1	(6201)	902	340	1772421
195	24.0	2.0	0.0	chr18	70012828	70012877	(10360408)	+	L2a	LINE/L2	3374	3424	(2)	1783977
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
14	8.3	0.0	3.6	chr19	1905230	1905257	(56712359)	+	(CGGGG)n	Simple_repeat	1	28	(0)	1799731
23	24.6	2.7	2.6	chr19	1905578	1905652	(56711964)	+	(CG)n	Simple_repeat	1	77	(0)	1799732
1233	21.4	8.5	0.0	chr19	2376067	2376430	(56241186)	C	MLT1D	LTR/ERVL-MaLR	(98)	407	10	1800642
12	10.3	2.7	7.9	chr19	5445713	5445749	(53171867)	+	GA-rich	Low_complexity	1	38	(0)	1808010
16	13.2	0.0	0.0	chr19	5624214	5624238	(52993378)	+	(T)n	Simple_repeat	1	25	(0)	1808473
217	28.9	3.9	2.2	chr19	5624262	5624350	(52993266)	+	MIR	SINE/MIR	166	259	(9)	1808474
17	0.0	0.0	0.0	chr19	5624688	5624706	(52992910)	+	(T)n	Simple_repeat	1	19	(0)	1808475
11	24.2	2.6	0.0	chr19	5720827	5720865	(52896751)	+	G-rich	Low_complexity	1	40	(0)	1808644
808	16.5	2.3	0.0	chr19	7340971	7341097	(51276519)	+	AluJr	SINE/Alu	1	130	(182)	1812690
2050	12.2	3.7	0.0	chr19	7341317	7341603	(51276013)	C	AluSx4	SINE/Alu	(12)	298	1	1812691
2859	14.1	4.4	3.0	chr19	9567463	9567937	(49049679)	C	MER1A	DNA/hAT-Charlie	(0)	529	48	1817661
712	28.3	19.4	3.9	chr19	11528494	11528683	(47088933)	+	L2a	LINE/L2	3206	3421	(5)	1822561
375	26.0	12.1	2.4	chr19	12733213	12733338	(45884278)	C	MIRc	SINE/MIR	(120)	148	9	1825103
1163	13.5	4.2	5.0	chr19	12733412	12733630	(45883986)	C	MER20	DNA/hAT-Charlie	(0)	219	3	1825104
313	29.9	5.6	0.8	chr19	12733634	12733751	(45883865)	C	MIRb	SINE/MIR	(20)	248	125	1825105
2454	8.7	0.0	0.0	chr19	12977521	12977820	(45639796)	C	AluSx1	SINE/Alu	(12)	300	1	1825688
208	31.9	11.2	2.5	chr19	13162554	13162740	(45454876)	C	MIR	SINE/MIR	(49)	219	7	1826009
823	24.5	3.0	4.4	chr19	13588873	13589077	(45028539)	C	MIR	SINE/MIR	(15)	247	46	1827197
184	23.9	6.6	5.3	chr19	13589282	13589356	(45028260)	+	L3	LINE/CR1	1740	1815	(2284)	1827198
808	24.2	4.7	0.9	chr19	13589518	13589742	(45027874)	C	MER58B	DNA/hAT-Charlie	(0)	341	108	1827199
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
12	20.5	2.0	5.9	chr19	17334383	17334432	(41283184)	+	(CCCCAG)n	Simple_repeat	1	51	(0)	1836049
12	30.8	3.3	0.0	chr19	18193506	18193565	(40424051)	+	(GACCCCT)n	Simple_repeat	1	62	(0)	1838335
21529	7.8	0.5	0.0	chr19	27847474	27850169	(30767447)	C	HERVL66-int	LTR/ERVL	(0)	4329	1621	1847999
1233	20.9	3.6	1.8	chr19	29690947	29691219	(28926397)	C	MLT1A	LTR/ERVL-MaLR	(7)	367	90	1850644
2157	11.4	1.9	5.7	chr19	29691227	29691437	(28926179)	C	THE1B	LTR/ERVL-MaLR	(6)	358	159	1850645
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
11	13.2	5.7	2.7	chr19	34772894	34772928	(23844688)	+	G-rich	Low_complexity	1	37	(0)	1859111
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
690	27.6	14.6	1.1	chr19	36488420	36488852	(22128764)	+	L1ME3D	LINE/L1	5490	5990	(252)	1862646
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
2179	15.8	6.1	4.9	chr19	37780040	37780547	(20837069)	C	L1MA7	LINE/L1	(5)	6286	5812	1865094
241	32.8	1.7	0.9	chr19	38974966	38975079	(19642537)	+	HAL1ME	LINE/L1	2210	2324	(141)	1867892
25	19.6	1.5	2.9	chr19	40348828	40348895	(18268721)	+	(TATAATA)n	Simple_repeat	1	69	(0)	1870837
427	29.2	13.2	4.9	chr19	40945349	40945735	(17671881)	C	L2c	LINE/L2	(134)	3253	2812	1872289
2542	12.2	1.6	0.0	chr19	40945765	40946140	(17671476)	C	MER57C1	LTR/ERV1	(1)	384	3	1872290
495	30.2	13.6	3.1	chr19	41013312	41013700	(17603916)	C	L2c	LINE/L2	(134)	3253	2812	1872426
2354	12.6	4.5	0.0	chr19	41013730	41014094	(17603522)	C	MER57C1	LTR/ERV1	(1)	384	3	1872427
12	13.9	6.2	0.0	chr19	42176848	42176879	(16440737)	+	(CGCC)n	Simple_repeat	1	34	(0)	1874737
30	22.1	0.0	3.6	chr19	42177009	42177092	(16440524)	+	(GCGG)n	Simple_repeat	1	84	(0)	1874738
17	6.5	2.8	5.4	chr19	42177108	42177143	(16440473)	+	(GCCC)n	Simple_repeat	1	37	(0)	1874739
28	3.3	0.0	0.0	chr19	42177252	42177282	(16440334)	+	(CCCGCT)n	Simple_repeat	1	31	(0)	1874740
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
876	15.4	0.0	0.0	chr19	42468654	42468789	(16148827)	+	AluSx	SINE/Alu	1	136	(176)	1875343
2056	10.6	4.9	0.0	chr19	43398287	43398559	(15219057)	C	AluSc	SINE/Alu	(22)	287	1	1876656
441	15.7	5.7	10.8	chr19	43398676	43398804	(15218812)	+	LTR54	LTR/ERV1	62	183	(327)	1876657
727	24.3	2.8	1.0	chr19	43398839	43399046	(15218570)	+	LTR54	LTR/ERV1	299	510	(0)	1876657
4463	23.2	7.5	5.0	chr19	43399059	43399802	(15217814)	C	L1MC5a	LINE/L1	(481)	2296	1580	1876654
411	27.6	16.9	5.4	chr19	44051026	44051092	(14566524)	+	L2	LINE/L2	561	627	(2792)	1878118
2064	13.0	5.0	0.0	chr19	44051093	44051414	(14566202)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1878120
411	27.6	16.9	5.4	chr19	44051415	44051524	(14566092)	+	L2	LINE/L2	628	775	(2644)	1878118
540	24.7	12.0	0.0	chr19	44356205	44356358	(14261258)	C	MIR	SINE/MIR	(27)	235	61	1878603
1215	13.4	0.2	0.0	chr19	44410766	44412174	(14205442)	+	ACRO1	Satellite/acro	1	1411	(0)	1878697
1192	10.6	0.3	0.0	chr19	44456469	44457877	(14159739)	C	ACRO1	Satellite/acro	(55)	1412	1	1878760
402	28.8	8.3	5.0	chr19	44593376	44593599	(14024017)	+	L1MDa	LINE/L1	2399	2604	(4029)	1879048
878	12.7	2.6	2.6	chr19	44593604	44593757	(14023859)	+	MLT1A0	LTR/ERVL-MaLR	34	187	(178)	1879068
1965	14.9	3.7	1.5	chr19	46029317	46029330	(12588286)	+	MSTC	LTR/ERVL-MaLR	80	89	(339)	1882866
2427	9.2	0.0	0.3	chr19	46029331	46029636	(12587980)	+	AluSq2	SINE/Alu	1	305	(8)	1882867
2353	5.6	3.4	0.0	chr19	48270797	48271084	(10346532)	+	AluYc	SINE/Alu	1	298	(1)	1888328
110	25.6	2.8	4.2	chr19	48271085	48271100	(10346516)	+	polypurine	Low_complexity	371	386	(0)	1888329
200	35.9	4.5	6.7	chr19	48997999	48998338	(9619278)	C	L2c	LINE/L2	(74)	3301	2973	1890151
2243	9.1	0.3	4.4	chr19	48998415	48998733	(9618883)	+	AluSz	SINE/Alu	3	308	(4)	1890152
279	24.5	5.7	1.5	chr19	49125615	49125739	(9491877)	C	MSR1	Satellite	(0)	130	1	1890432
16	20.2	0.0	4.1	chr19	49591443	49591491	(9026125)	+	(CCCCCTC)n	Simple_repeat	1	49	(0)	1891490
19	3.2	6.2	0.0	chr19	49591600	49591633	(9025983)	+	(CCCT)n	Simple_repeat	1	36	(0)	1891491
29	0.0	0.0	0.0	chr19	49591791	49591818	(9025798)	+	(GCCGG)n	Simple_repeat	1	28	(0)	1891492
967	12.1	0.0	0.0	chr19	50098956	50099087	(8518529)	C	AluYa5	SINE/Alu	(179)	132	1	1892629
237	27.9	0.0	0.0	chr19	50099127	50099187	(8518429)	C	L1MC4	LINE/L1	(5505)	710	650	1892628
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
589	23.8	13.9	4.1	chr19	51107553	51107797	(7509819)	C	L2	LINE/L2	(727)	2692	2420	1895027
336	31.3	16.6	0.5	chr19	51107789	51108000	(7509616)	+	L2b	LINE/L2	3123	3375	(0)	1895024
1039	13.7	1.1	3.3	chr19	55005934	55006005	(3611611)	+	AluSx	SINE/Alu	237	306	(6)	1902776
209	25.5	1.7	2.8	chr19	55563549	55564190	(3053426)	+	(CT)n	Simple_repeat	1	653	(0)	1904023
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
32544	20.9	1.9	1.6	chr2	6838364	6846789	(235346740)	C	HUERS-P3-int	LTR/ERV1	(224)	8695	262	1919104
272	29.3	13.6	2.5	chr2	9842774	9842859	(232350670)	C	MIRb	SINE/MIR	(0)	268	170	1923764
811	10.2	6.1	0.0	chr2	9842860	9842967	(232350562)	C	AluJr	SINE/Alu	(195)	117	3	1923765
272	29.3	13.6	2.5	chr2	9842968	9843115	(232350414)	C	MIRb	SINE/MIR	(99)	169	5	1923764
1440	22.0	9.9	1.5	chr2	11388000	11388331	(230805198)	C	MER57E1	LTR/ERV1	(0)	372	10	1926544
199	30.0	0.0	0.0	chr2	11388374	11388433	(230805096)	C	L3	LINE/CR1	(212)	3887	3828	1926545
966	20.0	3.7	5.6	chr2	15356888	15357189	(226836340)	+	MER31A	LTR/ERV1	1	296	(189)	1932580
787	18.3	7.7	1.1	chr2	15357269	15357450	(226836079)	+	MER57E1	LTR/ERV1	178	372	(0)	1932581
366	20.3	0.0	0.0	chr2	15357451	15357509	(226836020)	+	MER31A	LTR/ERV1	360	418	(67)	1932580
528	11.2	3.2	7.1	chr2	15357528	15357625	(226835904)	C	AluJb	SINE/Alu	(179)	133	40	1932582
2364	10.0	0.7	0.0	chr2	18934513	18934813	(223258716)	+	AluSg	SINE/Alu	1	303	(7)	1938143
1203	19.3	8.8	1.0	chr2	18934816	18935118	(223258411)	+	MER57D	LTR/ERV1	71	399	(12)	1938141
898	16.6	1.2	3.1	chr2	23900479	23900640	(218292889)	+	MER5A1	DNA/hAT-Charlie	7	165	(1)	1945051
1981	14.8	1.4	0.0	chr2	23977837	23978127	(218215402)	C	AluSz	SINE/Alu	(17)	295	1	1945251
339	10.2	0.0	0.0	chr2	23978294	23978343	(218215186)	+	MER57B1	LTR/ERV1	295	344	(59)	1945252
2449	6.8	0.0	0.3	chr2	23978363	23978656	(218214873)	+	AluY	SINE/Alu	2	294	(17)	1945253
1950	25.2	7.4	7.4	chr2	24054984	24055194	(218138335)	C	L1ME3A	LINE/L1	(1)	6172	5982	1945423
2095	11.7	0.0	0.7	chr2	26171834	26172142	(216021387)	+	AluSx1	SINE/Alu	1	307	(5)	1949476
267	26.4	14.6	0.0	chr2	26172371	26172499	(216021030)	+	MIRc	SINE/MIR	25	175	(93)	1949477
12	24.8	0.0	2.5	chr2	27715771	27715810	(214477719)	+	G-rich	Low_complexity	1	40	(0)	1952334
191	13.6	12.0	2.2	chr2	30225074	30225118	(211968411)	+	L2b	LINE/L2	3318	3367	(8)	1956600
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2498	7.3	0.3	0.3	chr2	33303348	33303649	(208889880)	C	AluY	SINE/Alu	(9)	302	1	1961756
2228	10.4	0.9	5.3	chr2	33303650	33303876	(208889653)	C	MER1B	DNA/hAT-Charlie	(119)	220	1	1961755
348	8.9	0.0	0.0	chr2	46662756	46662800	(195530729)	+	L4_B_Mam	LINE/RTE-X	4894	4938	(3)	1982612
43	0.0	0.0	0.0	chr2	46663269	46663305	(195530224)	+	(GT)n	Simple_repeat	1	37	(0)	1982613
1565	14.3	17.4	0.0	chr2	53442907	53443186	(188750343)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1992584
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
477	25.4	3.1	9.8	chr2	55619959	55620071	(186573458)	C	L1ME4b	LINE/L1	(53)	839	737	1996250
624	19.2	17.5	0.0	chr2	55620072	55620217	(186573312)	+	MER45A	DNA/hAT-Tip100	1	177	(1)	1996252
477	25.4	3.1	9.8	chr2	55620218	55620263	(186573266)	C	L1ME4b	LINE/L1	(156)	736	692	1996250
1156	18.3	0.0	0.0	chr2	55620271	55620467	(186573062)	+	MER1B	DNA/hAT-Charlie	24	220	(119)	1996253
519	10.1	0.0	0.0	chr2	55620470	55620538	(186572991)	+	MER1B	DNA/hAT-Charlie	271	339	(0)	1996254
778	13.7	2.5	0.0	chr2	55620539	55620653	(186572876)	+	Tigger3c	DNA/TcMar-Tigger	485	602	(0)	1996255
452	32.4	4.7	1.0	chr2	55709879	55710084	(186483445)	+	UCON105	Unknown	41	254	(19)	1996449
1993	16.6	8.9	0.3	chr2	55710160	55710497	(186483032)	C	MER57E1	LTR/ERV1	(0)	372	3	1996450
186	31.6	3.8	0.0	chr2	58261631	58261706	(183931823)	C	L2	LINE/L2	(1040)	2379	2301	1999547
2506	12.7	3.5	0.3	chr2	58261709	58262096	(183931433)	C	MER57B1	LTR/ERV1	(0)	401	1	1999548
503	33.8	6.4	2.2	chr2	59276397	59276620	(182916909)	C	MIRb	SINE/MIR	(8)	260	27	2000918
19	3.8	0.0	0.0	chr2	59276702	59276728	(182916801)	+	(AACAA)n	Simple_repeat	1	27	(0)	2000919
472	25.9	5.4	0.6	chr2	60377699	60377857	(181815672)	C	MIR	SINE/MIR	(1)	261	95	2002368
2617	15.5	3.6	0.0	chr2	61677733	61678159	(180515370)	+	LTR8B	LTR/ERV1	378	820	(0)	2004920
1635	16.4	5.1	0.0	chr2	61678160	61678438	(180515091)	+	MER57B2	LTR/ERV1	110	403	(0)	2004922
259	31.6	1.2	0.0	chr2	61678439	61678517	(180515012)	C	L2a	LINE/L2	(42)	3384	3305	2004923
2508	6.6	0.7	0.0	chr2	61764884	61765188	(180428341)	C	AluSx	SINE/Alu	(5)	307	1	2005141
903	25.1	8.2	5.9	chr2	64401393	64401771	(177791758)	C	LTR85a	LTR/Gypsy?	(80)	704	319	2009292
29	0.0	0.0	0.0	chr2	64401872	64401896	(177791633)	+	(TG)n	Simple_repeat	1	25	(0)	2009293
8296	21.4	2.6	2.6	chr2	65044777	65046931	(177146598)	C	HERVIP10FH-int	LTR/ERV1	(3)	7600	3599	2010472
19	0.0	0.0	0.0	chr2	67862592	67862612	(174330917)	+	(A)n	Simple_repeat	1	21	(0)	2014655
352	26.2	5.1	11.0	chr2	69438097	69438242	(172755287)	+	MER5A	DNA/hAT-Charlie	1	137	(52)	2017106
2059	11.4	4.3	0.0	chr2	84926401	84926690	(157266839)	C	AluSx1	SINE/Alu	(9)	303	1	2039690
474	18.7	8.2	4.3	chr2	84927375	84927612	(157265917)	+	L1MCa	LINE/L1	1790	2074	(4434)	2039691
354	28.1	0.8	7.9	chr2	85067106	85067244	(157126285)	+	MIR	SINE/MIR	15	143	(119)	2040037
1686	26.2	4.2	4.9	chr2	85067294	85067796	(157125733)	+	HERV16-int	LTR/ERVL	1422	2010	(2986)	2040038
193	17.1	0.0	5.4	chr2	85354208	85354244	(156839285)	C	MIR3	SINE/MIR	(59)	149	115	2040584
181	32.4	2.8	4.5	chr2	85354217	85354326	(156839203)	C	MIR1_Amn	SINE/MIR	(83)	147	40	2040585
17	12.3	2.7	2.6	chr2	85354466	85354502	(156839027)	+	(CAG)n	Simple_repeat	1	38	(0)	2040586
8918	19.1	3.2	2.6	chr2	85960434	85962178	(156231351)	C	MER52A	LTR/ERV1	(0)	1755	1	2041826
590	11.6	2.4	5.5	chr2	85962179	85962269	(156231260)	C	L1MB8	LINE/L1	(32)	6146	6055	2041825
1541	31.1	4.5	6.6	chr2	86540598	86541660	(155651869)	C	L1MEf	LINE/L1	(5261)	1139	100	2042814
34	0.0	0.0	0.0	chr2	88307856	88307884	(153885645)	+	(TG)n	Simple_repeat	1	29	(0)	2045699
378	25.2	1.5	5.6	chr2	88307887	88308029	(153885500)	C	MIR3	SINE/MIR	(51)	157	21	2045700
343	28.4	15.8	2.0	chr2	88308138	88308338	(153885191)	C	MIRb	SINE/MIR	(5)	263	30	2045701
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
18	23.3	1.8	1.7	chr2	98936205	98936261	(143257268)	+	(CGGCT)n	Simple_repeat	1	58	(0)	2055690
16	21.3	4.1	0.0	chr2	98936391	98936439	(143257090)	+	G-rich	Low_complexity	1	51	(0)	2055691
2260	16.8	1.6	4.7	chr2	101540323	101540730	(140652799)	C	MER65C	LTR/ERV1	(32)	429	31	2059770
4570	22.2	2.2	4.2	chr2	101540738	101542477	(140651052)	C	L1ME1	LINE/L1	(378)	5979	4271	2059769
28	19.9	0.0	0.0	chr2	104656798	104656850	(137536679)	+	A-rich	Low_complexity	1	53	(0)	2063810
13	20.1	0.0	2.8	chr2	104873433	104873468	(137320061)	+	(GCCCG)n	Simple_repeat	1	36	(0)	2064084
16	6.9	6.5	0.0	chr2	104873528	104873558	(137319971)	+	(CACTCA)n	Simple_repeat	1	33	(0)	2064085
236	27.9	0.0	0.0	chr2	105461967	105462034	(136731495)	C	L1ME4a	LINE/L1	(78)	6046	5979	2064982
1600	17.6	15.5	1.4	chr2	105462035	105462450	(136731079)	+	LTR54B	LTR/ERV1	1	485	(13)	2064983
265	26.1	8.5	0.0	chr2	105462454	105462572	(136730957)	C	L1ME4a	LINE/L1	(143)	5981	5852	2064982
416	23.7	6.1	0.0	chr2	105510633	105510725	(136682804)	+	LTR54	LTR/ERV1	1	99	(411)	2065061
902	25.5	6.3	2.2	chr2	105510744	105511016	(136682513)	+	MER57C1	LTR/ERV1	101	385	(0)	2065062
786	30.0	10.3	8.5	chr2	105511017	105511453	(136682076)	C	MamTip3	DNA/hAT-Tip100	(54)	446	1	2065063
668	14.9	0.8	11.5	chr2	110862335	110862482	(131331047)	+	AluJr	SINE/Alu	2	133	(179)	2072813
359	26.1	14.1	3.0	chr2	110862827	110863027	(131330502)	+	MER102c	DNA/hAT-Charlie	96	322	(9)	2072814
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
3111	12.1	0.9	1.4	chr2	113601977	113602680	(128590849)	+	TAR1	Satellite/telo	1	700	(1434)	2077035
2255	14.9	0.5	5.2	chr2	119352364	119352767	(122840762)	+	MER57C1	LTR/ERV1	1	385	(0)	2085185
2217	17.0	3.5	0.5	chr2	125911835	125912247	(116281282)	+	MER57C2	LTR/ERV1	8	433	(1)	2095241
371	24.0	5.2	2.7	chr2	125912249	125912398	(116281131)	C	Zaphod	DNA/hAT-Tip100	(65)	3966	3813	2095242
1490	17.2	10.1	5.1	chr2	135255101	135255257	(106938272)	+	LTR54B	LTR/ERV1	1	179	(319)	2108694
38	2.8	0.0	0.0	chr2	135255258	135255294	(106938235)	+	(AC)n	Simple_repeat	1	37	(0)	2108695
1490	17.2	10.1	5.1	chr2	135255295	135255566	(106937963)	+	LTR54B	LTR/ERV1	180	454	(44)	2108694
1629	16.6	2.7	1.4	chr2	135255567	135255855	(106937674)	+	AluJo	SINE/Alu	1	293	(19)	2108696
2801	13.5	1.5	0.0	chr2	142936892	142937291	(99256238)	C	MER48	LTR/ERV1	(1)	406	1	2119440
319	27.4	13.1	0.9	chr2	142937354	142937467	(99256062)	+	HAL1	LINE/L1	634	763	(1744)	2119436
2501	14.3	0.5	0.5	chr2	142937485	142937885	(99255644)	C	MER57B1	LTR/ERV1	(0)	401	1	2119441
2572	12.2	4.0	0.0	chr2	143081929	143082313	(99111216)	+	MER57B1	LTR/ERV1	1	401	(0)	2119643
235	28.1	5.9	7.5	chr2	143082314	143082406	(99111123)	C	LTR81A	LTR/Gypsy	(1114)	236	148	2119642
254	41.1	4.8	0.0	chr2	149769093	149769289	(92424240)	+	MIRb	SINE/MIR	4	210	(58)	2128535
689	22.9	9.8	6.7	chr2	150044078	150044362	(92149167)	C	L1ME3A	LINE/L1	(1)	6172	5878	2128826
1488	17.4	12.2	3.9	chr2	150292118	150292447	(91901082)	+	MER57E1	LTR/ERV1	12	372	(0)	2129161
648	2.8	0.0	0.0	chr2	156400769	156400840	(85792689)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	2137395
11425	10.7	1.1	0.2	chr2	159014492	159016056	(83177473)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2140989
615	13.6	12.6	0.8	chr2	159283680	159283805	(82909724)	C	MER1B	DNA/hAT-Charlie	(192)	147	5	2141362
2099	12.9	1.3	0.3	chr2	159283810	159284111	(82909418)	C	AluSz	SINE/Alu	(7)	305	1	2141364
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
21	16.8	1.4	7.1	chr2	159798202	159798270	(82395259)	+	G-rich	Low_complexity	1	70	(0)	2142174
1869	21.8	6.2	1.7	chr2	159798406	159798945	(82394584)	C	L1MC4a	LINE/L1	(0)	7882	7317	2142175
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
417	23.4	4.5	3.6	chr2	163127152	163127262	(79066267)	+	MIR	SINE/MIR	1	112	(150)	2146544
2078	15.6	9.5	0.0	chr2	163127275	163127665	(79065864)	+	MER57C2	LTR/ERV1	1	432	(2)	2146545
722	18.5	0.6	8.0	chr2	165003654	165003728	(77189801)	C	MER5A1	DNA/hAT-Charlie	(98)	68	1	2149097
1457	8.8	5.7	5.7	chr2	165003792	165004055	(77189474)	+	MER1B	DNA/hAT-Charlie	1	264	(75)	2149099
2415	28.0	7.6	5.9	chr2	165004063	165006169	(77187360)	C	L1MC4	LINE/L1	(2459)	3755	1605	2149096
1841	17.2	7.3	0.0	chr2	165958234	165958588	(76234941)	+	MER57C1	LTR/ERV1	3	385	(0)	2150394
185	36.8	5.0	0.0	chr2	165958700	165958775	(76234754)	+	MIR3	SINE/MIR	36	115	(93)	2150395
184	19.7	24.8	1.3	chr2	169584078	169584154	(72609375)	+	L2c	LINE/L2	3281	3381	(6)	2155223
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
16	22.6	1.8	3.6	chr2	171160827	171160881	(71032648)	+	(CGG)n	Simple_repeat	1	56	(0)	2157912
30	5.6	0.0	0.0	chr2	171160967	171161003	(71032526)	+	(GCG)n	Simple_repeat	1	37	(0)	2157913
1851	19.7	5.6	0.3	chr2	172249320	172249706	(69943823)	+	MER57D	LTR/ERV1	1	409	(2)	2159869
2125	11.1	0.0	0.7	chr2	172249718	172249997	(69943532)	+	AluSc	SINE/Alu	1	278	(31)	2159870
2096	11.2	1.8	0.0	chr2	172583282	172583592	(69609937)	C	AluSz6	SINE/Alu	(0)	312	1	2160361
13	26.9	3.8	0.0	chr2	172735765	172735817	(69457712)	+	(CCTCCCG)n	Simple_repeat	1	55	(0)	2160609
17	14.6	4.1	3.9	chr2	172735898	172735946	(69457583)	+	(GCGGAG)n	Simple_repeat	1	51	(0)	2160610
14	25.2	5.0	3.6	chr2	177392828	177392907	(64800622)	+	G-rich	Low_complexity	1	84	(0)	2167595
1487	22.9	7.6	1.7	chr2	177635559	177636092	(64557437)	C	L1ME4b	LINE/L1	(0)	892	325	2167883
735	24.5	17.5	0.0	chr2	181008250	181008457	(61185072)	C	MIR	SINE/MIR	(8)	254	3	2172184
1934	14.5	2.5	1.3	chr2	183318349	183318662	(58874867)	+	MER1B	DNA/hAT-Charlie	1	318	(21)	2175276
810	18.6	4.0	0.0	chr2	184681471	184681632	(57511897)	+	Zaphod3	DNA/hAT-Tip100	58	226	(2397)	2176866
1645	26.3	3.1	5.0	chr2	184681633	184682207	(57511322)	+	MER52D	LTR/ERV1	1	1019	(1104)	2176867
508	23.3	0.0	0.8	chr2	184682200	184682316	(57511213)	+	MER52D	LTR/ERV1	1639	1754	(1)	2176867
982	25.2	5.2	7.3	chr2	184682317	184682688	(57510841)	+	Zaphod3	DNA/hAT-Tip100	222	585	(2038)	2176868
2130	14.7	3.7	3.0	chr2	190277567	190277967	(51915562)	+	MER57D	LTR/ERV1	8	411	(0)	2184085
562	21.8	5.0	5.6	chr2	190278094	190278211	(51915318)	+	MER5A	DNA/hAT-Charlie	6	122	(67)	2184086
2274	11.0	0.3	0.0	chr2	190278212	190278503	(51915026)	C	AluSx1	SINE/Alu	(19)	293	1	2184087
17	23.9	2.0	0.0	chr2	190648836	190648885	(51544644)	+	(GCCCCC)n	Simple_repeat	1	51	(0)	2184672
30	13.1	0.0	4.7	chr2	190649073	190649136	(51544393)	+	(CGC)n	Simple_repeat	1	64	(0)	2184673
399	32.2	4.5	0.0	chr2	191677452	191677600	(50515929)	+	MIR3	SINE/MIR	39	194	(14)	2186262
29	3.2	0.0	0.0	chr2	191678404	191678435	(50515094)	+	(T)n	Simple_repeat	1	32	(0)	2186263
15	0.0	3.9	3.7	chr2	191678790	191678815	(50514714)	+	(CTCCC)n	Simple_repeat	1	27	(0)	2186264
711	21.9	3.0	0.6	chr2	195750585	195750766	(46442763)	+	MIR	SINE/MIR	18	202	(66)	2191424
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
315	25.4	6.3	8.5	chr2	199955997	199956125	(42237404)	+	L1MDb	LINE/L1	649	774	(5635)	2197597
24	24.3	1.8	6.3	chr2	202034104	202034219	(40159310)	+	(GCG)n	Simple_repeat	1	110	(0)	2201080
4387	20.5	6.9	5.8	chr2	202410962	202411244	(39782285)	+	L1MC4a	LINE/L1	7090	7382	(500)	2201931
1732	19.4	12.9	1.1	chr2	202411245	202411681	(39781848)	C	LTR54B	LTR/ERV1	(2)	496	1	2201935
4387	20.5	6.9	5.8	chr2	202411682	202412158	(39781371)	+	L1MC4a	LINE/L1	7383	7880	(2)	2201931
12	20.8	4.3	2.1	chr2	203534996	203535041	(38658488)	+	(GGAGGCG)n	Simple_repeat	1	48	(0)	2204167
46	0.0	0.0	0.0	chr2	203535259	203535300	(38658229)	+	(TGAC)n	Simple_repeat	1	42	(0)	2204168
33	12.7	1.6	1.6	chr2	203535304	203535365	(38658164)	+	(GGC)n	Simple_repeat	1	63	(0)	2204169
31	25.4	4.6	2.2	chr2	203535450	203535580	(38657949)	+	(CCGCCCG)n	Simple_repeat	1	137	(0)	2204170
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
52	0.0	0.0	0.0	chr2	210171296	210171342	(32022187)	+	(GCC)n	Simple_repeat	1	47	(0)	2214032
2207	15.6	8.5	0.0	chr2	211955515	211955911	(30237618)	+	MER57C2	LTR/ERV1	1	434	(0)	2216286
693	8.3	4.0	13.0	chr2	212638830	212638967	(29554562)	+	MER57D	LTR/ERV1	287	411	(0)	2217215
291	23.9	9.3	0.0	chr2	212639161	212639248	(29554281)	+	L2a	LINE/L2	3260	3356	(70)	2217216
3557	14.4	2.6	0.4	chr2	217288393	217288909	(24904620)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2224179
27	13.6	0.0	0.0	chr2	223602504	223602545	(18590984)	+	(A)n	Simple_repeat	1	42	(0)	2234471
456	29.4	1.2	4.0	chr2	227106866	227106977	(15086552)	+	Charlie29a	DNA/hAT-Charlie	60	172	(547)	2239912
868	16.2	8.5	0.6	chr2	227107210	227107383	(15086146)	+	MER20	DNA/hAT-Charlie	29	217	(2)	2239914
706	19.7	6.2	0.7	chr2	230296981	230297133	(11896396)	C	MER57D	LTR/ERV1	(4)	407	246	2244979
662	20.3	4.4	5.6	chr2	230297154	230297315	(11896214)	C	MER57D	LTR/ERV1	(212)	160	1	2244979
734	19.6	6.0	4.2	chr2	230396310	230396649	(11796880)	C	MER57D	LTR/ERV1	(2)	409	4	2245080
3111	11.4	0.5	0.7	chr2	230832264	230832696	(11360833)	+	MER57A1	LTR/ERV1	1	432	(0)	2245759
2482	19.8	4.4	3.7	chr2	230832697	230833197	(11360332)	+	L1M4a2	LINE/L1	1720	2227	(429)	2245756
2339	9.3	0.0	1.0	chr2	233867464	233867775	(8325754)	C	AluSq	SINE/Alu	(2)	311	3	2251038
2303	9.1	1.0	0.0	chr2	233867790	233868087	(8325442)	C	AluSg	SINE/Alu	(9)	301	1	2251039
289	29.3	9.7	2.1	chr2	233868462	233868747	(8324782)	C	L1M5	LINE/L1	(2848)	3298	2989	2251040
186	11.7	1.2	2.4	chr2	234544585	234544910	(7648619)	+	GA-rich	Low_complexity	1	330	(0)	2252149
212	29.6	15.2	1.4	chr2	234545216	234545362	(7648167)	+	Tigger19a	DNA/TcMar-Tigger	86	256	(67)	2252150
2751	11.8	0.0	3.4	chr2	238668921	238669331	(3524198)	+	MER57B1	LTR/ERV1	1	397	(4)	2258099
181	31.7	8.0	4.6	chr2	238669485	238669593	(3523936)	+	MIR1_Amn	SINE/MIR	30	142	(88)	2258100
1393	20.9	3.5	3.0	chr20	1083409	1083778	(63360389)	+	MER57E1	LTR/ERV1	1	372	(0)	2264392
989	25.3	6.8	4.3	chr20	1083812	1084163	(63360004)	+	MLT1I	LTR/ERVL-MaLR	39	448	(0)	2264393
271	24.8	15.3	5.0	chr20	2236179	2236318	(62207849)	+	MER103C	DNA/hAT-Charlie	87	243	(54)	2266551
30	22.7	3.2	4.7	chr20	3407640	3407762	(61036405)	+	(GGCGCG)n	Simple_repeat	1	127	(0)	2268792
534	25.0	0.8	0.0	chr20	4085003	4085122	(60359045)	+	L2a	LINE/L2	3305	3425	(1)	2270089
464	30.6	0.6	4.0	chr20	6976486	6976533	(57467634)	C	MER5B	DNA/hAT-Charlie	(1)	177	135	2275243
2312	17.1	0.2	3.1	chr20	6976534	6976979	(57467188)	+	MER57C2	LTR/ERV1	1	433	(1)	2275244
464	30.6	0.6	4.0	chr20	6976980	6977107	(57467060)	C	MER5B	DNA/hAT-Charlie	(44)	134	7	2275243
738	18.4	3.3	13.0	chr20	7113923	7114160	(57330007)	C	MER20	DNA/hAT-Charlie	(0)	219	6	2275426
1367	19.7	13.5	0.0	chr20	9146464	9146783	(55297384)	C	MER57E1	LTR/ERV1	(0)	372	3	2278459
1994	17.3	3.7	2.7	chr20	11750507	11750910	(52693257)	+	MER57D	LTR/ERV1	2	409	(2)	2282426
186	29.9	14.0	1.7	chr20	11888536	11888654	(52555513)	C	MIRb	SINE/MIR	(0)	268	133	2282677
357	9.9	0.0	3.3	chr20	11888687	11888755	(52555412)	C	MLT2B1	LTR/ERVL	(0)	567	493	2282678
773	21.8	18.7	3.1	chr20	11888759	11889113	(52555054)	C	LTR54	LTR/ERV1	(0)	510	76	2282679
20	6.5	3.0	0.0	chr20	11889121	11889153	(52555014)	+	(TGTT)n	Simple_repeat	1	34	(0)	2282680
440	28.4	2.5	3.2	chr20	15860557	15860788	(48583379)	C	L1ME3Cz	LINE/L1	(8)	989	774	2288518
1836	17.3	4.8	0.0	chr20	15860810	15861150	(48583017)	C	MER57E1	LTR/ERV1	(14)	358	1	2288519
801	20.9	15.0	5.9	chr20	20218951	20219305	(44224862)	+	LTR54	LTR/ERV1	75	509	(1)	2295345
3011	12.5	0.0	0.0	chr20	20810035	20810466	(43633701)	+	MER57A1	LTR/ERV1	1	432	(0)	2296127
3190	11.2	19.1	2.3	chr20	20810589	20811209	(43632958)	C	LTR8A	LTR/ERV1	(0)	727	1	2296128
18	25.3	1.3	5.1	chr20	25390705	25390781	(39053386)	+	(CCG)n	Simple_repeat	1	78	(0)	2302097
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
5631	14.8	3.0	7.2	chr20	29880107	29881265	(34562902)	+	Tigger1	DNA/TcMar-Tigger	1310	2418	(0)	2304624
386	18.8	0.0	0.0	chr20	29881277	29881340	(34562827)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
339	19.1	1.6	0.0	chr20	29881352	29881414	(34562753)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
19	17.7	0.0	2.5	chr20	32358330	32358369	(32085798)	+	(CA)n	Simple_repeat	1	40	(0)	2308298
50	26.2	3.6	4.7	chr20	32358520	32358766	(32085401)	+	(GCC)n	Simple_repeat	1	256	(0)	2308299
303	33.3	6.2	0.0	chr20	35314341	35314460	(29129707)	+	L2c	LINE/L2	3257	3384	(3)	2314993
995	15.0	0.6	1.2	chr20	35615571	35615730	(28828437)	+	FRAM	SINE/Alu	1	159	(17)	2315685
2056	10.1	2.1	0.0	chr20	36836342	36836643	(27607524)	C	AluSx	SINE/Alu	(0)	312	1	2318574
1741	15.0	0.3	7.2	chr20	36836644	36836793	(27607374)	C	AluJr	SINE/Alu	(179)	133	2	2318573
252	31.6	3.9	0.0	chr20	36837070	36837207	(27606960)	+	L2c	LINE/L2	3021	3172	(203)	2318575
2500	9.1	0.0	0.0	chr20	37249010	37249316	(27194851)	+	AluSx1	SINE/Alu	1	307	(5)	2319572
1284	16.8	17.1	8.4	chr20	37249317	37249550	(27194617)	+	LTR54B	LTR/ERV1	217	473	(25)	2319571
2297	11.1	0.0	0.9	chr20	37249551	37249865	(27194302)	+	AluSx	SINE/Alu	1	312	(0)	2319573
1521	26.2	11.7	7.2	chr20	39290640	39291375	(25152792)	+	MER21C	LTR/ERVL	1	817	(121)	2323866
1053	20.5	8.6	6.8	chr20	39291368	39291400	(25152767)	+	LTR37A	LTR/ERV1	33	71	(355)	2323867
2685	10.8	2.7	0.8	chr20	39291401	39291793	(25152374)	C	MER57B1	LTR/ERV1	(0)	401	1	2323868
189	29.1	9.6	6.2	chr20	40897607	40897767	(23546400)	C	L2	LINE/L2	(401)	3018	2852	2326648
1537	17.5	11.2	10.1	chr20	44319907	44320312	(20123855)	+	MER57D	LTR/ERV1	1	411	(0)	2333179
1671	17.0	8.1	6.1	chr20	44320313	44320634	(20123533)	+	L1MC5	LINE/L1	8150	8486	(818)	2333178
932	29.0	6.5	1.1	chr20	47954425	47954863	(16489304)	+	MLT1K	LTR/ERVL-MaLR	130	593	(2)	2341181
638	4.7	0.0	5.8	chr20	47954864	47954949	(16489218)	+	AluSc	SINE/Alu	214	294	(15)	2341182
1091	21.7	0.0	0.5	chr20	47955308	47955515	(16488652)	C	MER3	DNA/hAT-Charlie	(0)	209	3	2341183
391	28.7	11.2	0.0	chr20	48354184	48354350	(16089817)	+	MIRb	SINE/MIR	28	215	(53)	2341938
2475	14.0	2.9	1.0	chr20	48354487	48354889	(16089278)	C	MER57D	LTR/ERV1	(0)	411	1	2341939
2150	11.2	0.0	0.0	chr20	50506039	50506314	(13937853)	+	AluSx	SINE/Alu	1	276	(36)	2347128
49	0.0	0.0	0.0	chr20	50506321	50506365	(13937802)	+	(AAACA)n	Simple_repeat	1	45	(0)	2347129
67	17.2	0.8	0.0	chr20	53501527	53501647	(10942520)	+	(AT)n	Simple_repeat	1	122	(0)	2353585
2282	10.7	0.3	0.7	chr20	53501701	53502010	(10942157)	C	AluSc5	SINE/Alu	(0)	309	1	2353586
20	21.3	2.9	2.8	chr20	53502019	53502071	(10942096)	+	(ATTT)n	Simple_repeat	1	54	(0)	2353587
2194	14.1	1.5	9.2	chr20	53952502	53952947	(10491220)	+	MER57D	LTR/ERV1	1	411	(0)	2354751
232	20.7	2.9	3.7	chr20	53953002	53953065	(10491102)	C	L2a	LINE/L2	(0)	3426	3321	2354752
16	11.7	0.0	0.0	chr20	53953066	53953093	(10491074)	+	(TGA)n	Simple_repeat	1	28	(0)	2354753
472	26.3	10.0	0.6	chr20	53953107	53953278	(10490889)	C	MIRb	SINE/MIR	(21)	247	58	2354754
2963	21.6	2.7	0.8	chr20	56328393	56329016	(8115151)	C	L1MB7	LINE/L1	(145)	6039	5404	2358804
280	25.3	4.8	0.0	chr20	56329045	56329123	(8115044)	C	LTR16E1	LTR/ERVL	(451)	87	5	2358807
340	31.9	4.0	8.9	chr20	56329147	56329191	(8114976)	C	L2c	LINE/L2	(253)	3134	3096	2358808
2386	13.1	0.0	0.0	chr20	56329192	56329497	(8114670)	+	AluSz6	SINE/Alu	2	307	(5)	2358809
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
1247	22.8	0.6	0.2	chr21	8232546	8235312	(38474671)	+	(TCTC)n	Simple_repeat	1	2784	(0)	2373335
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8464121	8465014	(38244969)	+	(CTCT)n	Simple_repeat	1	897	(0)	2373686
53	2.0	0.0	0.0	chr21	8465015	8465064	(38244919)	+	(GT)n	Simple_repeat	1	50	(0)	2373687
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
342	35.4	4.7	0.0	chr21	9126682	9126862	(37583121)	+	L4_B_Mam	LINE/RTE-X	4232	4421	(520)	2374264
3424	19.3	3.5	9.5	chr21	9143369	9144153	(37565830)	C	LTR49-int	LTR/ERV1	(1013)	5318	4572	2374278
1738	18.7	0.7	1.0	chr21	9144154	9144447	(37565536)	C	AluJb	SINE/Alu	(18)	294	2	2374279
3424	21.2	4.9	9.9	chr21	9144448	9144867	(37565116)	C	LTR49-int	LTR/ERV1	(1760)	4571	4283	2374278
314	37.0	7.3	1.7	chr21	9195431	9195661	(37514322)	C	MIRb	SINE/MIR	(0)	268	24	2374335
808	4.0	0.0	0.0	chr21	9195764	9195863	(37514120)	C	L1PA2	LINE/L1	(0)	6155	6056	2374336
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
627	27.0	2.1	1.6	chr21	9257721	9257908	(37452075)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2374356
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
4607	4.8	0.0	0.0	chr21	10271643	10272208	(36437775)	+	HSATI	Satellite	2	567	(10)	2375350
1723	14.4	0.0	5.1	chr21	10272209	10272500	(36437483)	+	AluSx3	SINE/Alu	13	289	(22)	2375351
471	27.5	6.0	1.2	chr21	10330456	10330628	(36379355)	C	ERVL-E-int	LTR/ERVL	(648)	5019	4838	2375365
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
27	3.5	0.0	0.0	chr21	15730357	15730386	(30979597)	+	(CGC)n	Simple_repeat	1	30	(0)	2379541
15	29.9	2.8	1.4	chr21	15730497	15730573	(30979410)	+	(CGGCCC)n	Simple_repeat	1	78	(0)	2379542
1219	18.9	4.7	4.0	chr21	19191726	19191886	(27518097)	C	L1MB8	LINE/L1	(6)	6172	6018	2384002
2581	13.2	1.5	0.0	chr21	19191887	19192279	(27517704)	C	MER57B1	LTR/ERV1	(0)	401	3	2384003
3195	13.5	2.3	1.0	chr21	24348328	24348565	(22361418)	+	MER75	DNA/PiggyBac	1	243	(271)	2391008
2569	13.0	0.0	2.7	chr21	24348566	24348940	(22361043)	C	MER57B1	LTR/ERV1	(0)	401	35	2391009
2500	5.7	0.0	1.0	chr21	29476292	29476589	(17233394)	+	AluSq2	SINE/Alu	1	295	(18)	2398380
16	0.0	0.0	0.0	chr21	29476701	29476717	(17233266)	+	(T)n	Simple_repeat	1	17	(0)	2398381
409	27.3	14.6	4.6	chr21	30953240	30953588	(15756395)	C	L1MEd	LINE/L1	(6572)	514	125	2400502
924	14.7	10.2	0.6	chr21	30953603	30953780	(15756203)	C	MER57B1	LTR/ERV1	(28)	373	177	2400503
1675	13.2	0.0	5.9	chr21	31514431	31514703	(15195280)	+	AluSx1	SINE/Alu	36	292	(20)	2401507
670	28.2	4.9	4.0	chr21	33236191	33236493	(13473490)	C	MER45C	DNA/hAT-Tip100	(175)	778	473	2404564
4444	19.9	9.2	4.7	chr21	33312331	33313138	(13396845)	+	L1MEc	LINE/L1	34	872	(5528)	2404708
2137	15.0	3.5	7.0	chr21	33313139	33313554	(13396429)	C	MER57B2	LTR/ERV1	(2)	401	1	2404709
1130	17.2	0.0	0.0	chr21	33470743	33470911	(13239072)	+	AluSx	SINE/Alu	136	304	(8)	2405049
964	27.8	6.5	4.6	chr21	33470986	33471572	(13238411)	+	L1MEf	LINE/L1	475	1080	(5231)	2405046
7133	22.5	7.7	3.8	chr21	33747169	33748181	(12961802)	+	L1M4a1	LINE/L1	1240	2294	(285)	2405562
504	24.7	10.0	1.6	chr21	34030010	34030338	(12679645)	C	MLT1J2	LTR/ERVL-MaLR	(22)	426	1	2406026
652	26.4	6.3	4.0	chr21	34030341	34030589	(12679394)	+	MLT1L	LTR/ERVL-MaLR	344	598	(12)	2406027
2042	11.5	7.4	1.3	chr21	36893507	36893824	(9816159)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2410624
2315	10.0	13.6	0.5	chr21	36893961	36894332	(9815651)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2410625
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
588	36.0	6.9	3.6	chr21	37700478	37700726	(9009257)	C	L2b	LINE/L2	(560)	2859	2611	2411998
631	22.1	8.5	0.6	chr21	37700727	37700899	(9009084)	+	MER91B	DNA/hAT-Tip100	1	188	(2)	2411999
588	36.0	6.9	3.6	chr21	37700900	37701317	(9008666)	C	L2b	LINE/L2	(809)	2610	2168	2411998
13	9.3	2.4	9.3	chr21	39313332	39313373	(7396610)	+	GA-rich	Low_complexity	1	43	(0)	2414333
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
2079	10.9	1.2	8.4	chr21	41289361	41289719	(5420264)	C	MER1B	DNA/hAT-Charlie	(0)	339	7	2417218
313	29.3	9.8	1.8	chr21	41289741	41290021	(5419962)	C	L1M5	LINE/L1	(3393)	2753	2446	2417215
297	29.2	0.0	0.0	chr21	41571793	41571881	(5138102)	C	L1MA10	LINE/L1	(1)	6333	6245	2417664
2070	17.5	9.3	1.2	chr21	41571882	41572080	(5137903)	C	MER74C	LTR/ERVL	(0)	460	252	2417665
2281	12.1	9.5	3.9	chr21	41572081	41572467	(5137516)	C	MER57D	LTR/ERV1	(0)	411	1	2417666
2070	17.5	9.3	1.2	chr21	41572468	41572689	(5137294)	C	MER74C	LTR/ERVL	(209)	251	1	2417665
3487	11.6	3.6	0.6	chr21	44845289	44845537	(1864446)	C	MER41C	LTR/ERV1	(255)	266	1	2422240
1599	14.6	10.8	0.0	chr21	46063285	46063572	(646411)	C	MER57C2	LTR/ERV1	(0)	434	112	2423463
405	23.5	0.0	3.8	chr21	46063574	46063679	(646304)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	371	2423464
1530	18.8	3.0	0.0	chr22	10701285	10701540	(40116928)	+	AluJo	SINE/Alu	11	274	(38)	2424534
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
2046	15.2	0.0	0.0	chr22	11877779	11878081	(38940387)	C	AluSx	SINE/Alu	(4)	308	6	2425483
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
5492	25.2	7.0	0.9	chr22	11917727	11919230	(38899238)	+	MSTA-int	LTR/ERVL-MaLR	28	1631	(0)	2425534
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
16	8.3	0.0	0.0	chr22	19730565	19730590	(31087878)	+	(AGTG)n	Simple_repeat	1	26	(0)	2432487
12	22.2	7.7	0.0	chr22	20704302	20704353	(30114115)	+	(GCCGCT)n	Simple_repeat	1	56	(0)	2433786
264	26.6	11.3	6.0	chr22	22004041	22004091	(28814377)	+	L1M4	LINE/L1	3687	3757	(2389)	2436355
1785	16.6	8.9	4.5	chr22	22004092	22004445	(28814023)	+	MER57E1	LTR/ERV1	2	372	(0)	2436356
264	26.6	11.3	6.0	chr22	22004446	22004577	(28813891)	+	L1M4	LINE/L1	3758	3881	(2265)	2436355
166	30.7	2.0	1.9	chr22	23954244	23954899	(26863569)	+	(CA)n	Simple_repeat	1	669	(0)	2439273
102	11.2	0.0	0.0	chr22	24270220	24270378	(26548090)	+	(TA)n	Simple_repeat	1	159	(0)	2439764
301	29.7	6.6	2.3	chr22	24270379	24270502	(26547966)	+	L2a	LINE/L2	3268	3398	(28)	2439765
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
208	30.4	0.0	0.0	chr22	26493845	26493900	(24324568)	+	MIR	SINE/MIR	6	61	(201)	2444440
22946	0.3	0.0	0.0	chr22	28663284	28669315	(22149153)	+	L1HS	LINE/L1	124	6155	(0)	2448899
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
26	19.0	4.4	5.3	chr22	28773015	28773138	(22045330)	+	G-rich	Low_complexity	1	122	(0)	2449171
305	20.0	0.0	3.0	chr22	28773181	28773247	(22045221)	C	MIR	SINE/MIR	(118)	144	80	2449172
31	6.0	0.0	6.7	chr22	30968842	30968901	(19849567)	+	(GCC)n	Simple_repeat	1	60	(0)	2453682
1556	19.0	2.1	7.8	chr22	31063598	31064008	(19754460)	C	MER57B2	LTR/ERV1	(13)	390	4	2453928
334	9.6	1.9	0.0	chr22	31064061	31064112	(19754356)	C	MLT1O	LTR/ERVL-MaLR	(372)	170	118	2453929
313	33.6	0.8	8.1	chr22	31064228	31064363	(19754105)	C	L2c	LINE/L2	(150)	3237	3112	2453930
987	14.6	1.9	1.3	chr22	31064499	31064656	(19753812)	C	FRAM	SINE/Alu	(17)	159	1	2453931
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2317	13.8	7.4	0.8	chr22	35061950	35062351	(15756117)	+	MER57F	LTR/ERV1	5	435	(0)	2462175
392	31.6	6.7	2.9	chr22	35062368	35062540	(15755928)	+	L2a	LINE/L2	3247	3426	(0)	2462176
1805	25.4	5.7	8.4	chr22	35183907	35184775	(15633693)	+	L1MEf	LINE/L1	1197	2040	(4160)	2462436
13849	14.9	4.1	2.6	chr22	35184780	35188467	(15630001)	+	L1PREC2	LINE/L1	1933	5278	(2863)	2462437
2769	24.5	10.0	3.0	chr22	35246888	35247737	(15570731)	C	L1MEc	LINE/L1	(5373)	1027	103	2462553
30	0.0	0.0	0.0	chr22	35247738	35247765	(15570703)	+	(GTTT)n	Simple_repeat	1	28	(0)	2462554
2769	24.5	10.0	3.0	chr22	35247766	35247853	(15570615)	C	L1MEc	LINE/L1	(6298)	102	17	2462553
3537	11.5	0.4	4.0	chr22	35247874	35248192	(15570276)	C	Tigger3	DNA/TcMar-Tigger	(1)	3028	2726	2462555
12	20.6	2.4	2.4	chr22	35257999	35258039	(15560429)	+	(GGCTGC)n	Simple_repeat	1	42	(0)	2462580
1590	24.6	3.8	5.8	chr22	35929298	35929652	(14888816)	+	L1MB7	LINE/L1	5593	5940	(244)	2463992
918	13.0	0.8	0.0	chr22	35929653	35929783	(14888685)	C	FLAM_C	SINE/Alu	(10)	133	2	2463996
1590	24.6	3.8	5.8	chr22	35929784	35930017	(14888451)	+	L1MB7	LINE/L1	5941	6170	(14)	2463992
468	27.2	17.8	3.1	chr22	40654509	40654732	(10163736)	+	MIRc	SINE/MIR	1	264	(4)	2474021
199	22.2	8.0	9.0	chr22	40654808	40654896	(10163572)	C	MIRc	SINE/MIR	(145)	123	36	2474022
16	6.1	5.3	5.0	chr22	41914574	41914611	(8903857)	+	(GCGCGA)n	Simple_repeat	1	40	(0)	2477045
28	7.9	0.0	0.0	chr22	41915070	41915109	(8903359)	+	(GCTCCG)n	Simple_repeat	1	40	(0)	2477046
304	31.5	7.8	3.0	chr22	49882208	49882273	(936195)	C	L1MEd	LINE/L1	(6936)	167	102	2489902
649	23.2	1.3	2.0	chr22	49882274	49882424	(936044)	+	FRAM	SINE/Alu	4	153	(23)	2489909
304	31.5	7.8	3.0	chr22	49882425	49882491	(935977)	C	L1MEd	LINE/L1	(7002)	101	28	2489902
277	36.7	5.2	0.0	chr22	50597420	50597547	(220921)	C	MIRc	SINE/MIR	(121)	147	13	2490930
1996	15.0	3.8	0.9	chr3	4791283	4791611	(193503948)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2499597
3798	14.2	4.5	0.3	chr3	14079726	14080369	(184215190)	C	MER57-int	LTR/ERV1	(6865)	672	1	2516271
3001	9.4	3.7	0.0	chr3	14080370	14080785	(184214774)	C	MER57A1	LTR/ERV1	(0)	432	1	2516271
1235	25.2	11.4	3.9	chr3	15148622	15149136	(183146423)	+	MLT1G3	LTR/ERVL-MaLR	3	561	(34)	2518280
240	32.8	1.5	0.0	chr3	21896406	21896469	(176399090)	+	MLT1N2	LTR/ERVL-MaLR	117	181	(381)	2528014
2700	11.3	0.8	0.5	chr3	24919285	24919684	(173375875)	+	MER57B1	LTR/ERV1	1	401	(0)	2532632
1957	12.6	5.9	2.8	chr3	28310749	28311075	(169984484)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	2537615
15	19.6	8.2	1.5	chr3	29280643	29280703	(169014856)	+	(CCTT)n	Simple_repeat	1	66	(0)	2538963
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
13	14.9	2.3	6.8	chr3	30606765	30606807	(167688752)	+	(GCGCG)n	Simple_repeat	1	44	(0)	2540793
6194	18.7	3.6	1.9	chr3	30714017	30714229	(167581330)	+	L1M4c	LINE/L1	21	234	(6150)	2540970
2210	14.2	0.6	1.2	chr3	30714230	30714570	(167580989)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2540971
6194	18.7	3.6	1.9	chr3	30714571	30715685	(167579874)	+	L1M4c	LINE/L1	235	1373	(5011)	2540970
1259	15.5	25.4	0.0	chr3	31798840	31799091	(166496468)	C	MER1B	DNA/hAT-Charlie	(0)	339	2	2542645
717	19.2	0.0	2.3	chr3	31799266	31799395	(166496164)	+	FLAM_A	SINE/Alu	6	132	(10)	2542646
12	19.9	0.0	0.0	chr3	33798625	33798653	(164496906)	+	(CAGC)n	Simple_repeat	1	29	(0)	2546482
10271	10.9	5.6	1.1	chr3	38432574	38433892	(159861667)	C	THE1C-int	LTR/ERVL-MaLR	(183)	1397	1	2553043
2423	6.8	1.7	0.0	chr3	43690061	43690354	(154605205)	C	AluSp	SINE/Alu	(14)	299	1	2560994
13	25.5	0.0	0.0	chr3	43690981	43691017	(154604542)	+	(GCG)n	Simple_repeat	1	37	(0)	2560995
2319	9.6	0.0	0.0	chr3	44728880	44729180	(153566379)	C	AluSx1	SINE/Alu	(11)	301	1	2562570
539	24.6	12.4	2.3	chr3	44729181	44729204	(153566355)	C	MIR	SINE/MIR	(224)	38	15	2562569
263	29.0	16.9	0.0	chr3	44729869	44730030	(153565529)	+	MIRc	SINE/MIR	24	218	(50)	2562571
15	26.8	0.0	0.0	chr3	47163892	47163936	(151131623)	+	(CTGCGG)n	Simple_repeat	1	45	(0)	2566541
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
18	16.2	1.9	5.5	chr3	47476084	47476137	(150819422)	+	(GGCCG)n	Simple_repeat	1	55	(0)	2567227
3961	13.1	3.7	0.6	chr3	48239957	48240580	(150054979)	C	LTR9B	LTR/ERV1	(0)	644	1	2569011
15	11.9	2.5	4.9	chr3	49166109	49166148	(149129411)	+	G-rich	Low_complexity	1	41	(0)	2570754
13	24.0	3.9	1.9	chr3	49470074	49470124	(148825435)	+	G-rich	Low_complexity	1	53	(0)	2571452
16	26.7	0.0	3.5	chr3	49470325	49470381	(148825178)	+	(GGC)n	Simple_repeat	1	57	(0)	2571453
92	29.9	1.6	4.1	chr3	52410122	52410550	(145885009)	+	G-rich	Low_complexity	1	436	(0)	2575858
13	5.2	0.0	0.0	chr3	53046028	53046047	(145249512)	+	(CGG)n	Simple_repeat	1	20	(0)	2576892
23	21.5	6.9	4.0	chr3	53046088	53046203	(145249356)	+	(GCGCCC)n	Simple_repeat	1	124	(0)	2576893
482	27.8	12.6	2.5	chr3	54139957	54140155	(144155404)	+	MIRb	SINE/MIR	47	268	(0)	2578619
16	13.3	3.0	0.0	chr3	55488133	55488165	(142807394)	+	G-rich	Low_complexity	1	34	(0)	2580519
1124	18.1	1.8	0.5	chr3	55517971	55518186	(142777373)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2580575
21	4.2	0.0	0.0	chr3	60107148	60107172	(138188387)	+	(T)n	Simple_repeat	1	25	(0)	2588529
2076	19.3	3.7	0.2	chr3	60107384	60107803	(138187756)	C	MER57F	LTR/ERV1	(0)	435	1	2588530
1244	30.1	4.6	1.1	chr3	61353428	61353867	(136941692)	+	LTR33	LTR/ERVL	1	456	(59)	2590415
318	30.5	1.7	14.5	chr3	64087533	64087613	(134207946)	+	MLT1O	LTR/ERVL-MaLR	8	79	(463)	2595134
335	37.3	11.1	5.8	chr3	65617818	65618232	(132677327)	C	L2b	LINE/L2	(1)	3374	2935	2597702
2283	14.1	0.0	0.0	chr3	71491010	71491315	(126804244)	C	AluSx1	SINE/Alu	(6)	306	1	2607310
268	34.4	10.9	0.9	chr3	73297935	73298148	(124997411)	C	MIRb	SINE/MIR	(30)	238	1	2610984
21	22.4	1.9	1.8	chr3	73298192	73298245	(124997314)	+	(CT)n	Simple_repeat	1	55	(0)	2610985
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
6240	11.6	6.7	3.5	chr3	75677114	75677995	(122617564)	C	MER57A-int	LTR/ERV1	(3755)	2432	1495	2614566
984	24.1	13.4	0.3	chr3	78890234	78890558	(119405001)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	2618757
1759	19.3	3.4	3.0	chr3	79558939	79559344	(118736215)	+	MER57D	LTR/ERV1	4	411	(0)	2619662
994	30.7	11.8	3.6	chr3	80810385	80810800	(117484759)	+	LTR83	LTR/ERVL	1	422	(358)	2621249
1440	12.7	16.2	3.4	chr3	80810801	80811094	(117484465)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2621250
994	30.7	11.8	3.6	chr3	80811095	80811350	(117484209)	+	LTR83	LTR/ERVL	423	736	(44)	2621249
18	9.8	3.0	0.0	chr3	87227477	87227509	(111068050)	+	(GGGCC)n	Simple_repeat	1	34	(0)	2629279
462	28.8	12.2	1.3	chr3	88219093	88219317	(110076242)	+	MLT1L	LTR/ERVL-MaLR	2	254	(356)	2630551
593	31.1	5.7	5.6	chr3	88219319	88219886	(110075673)	+	LTR41	LTR/ERVL	1	563	(195)	2630552
2088	12.5	3.2	5.8	chr3	90162585	90162932	(108132627)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2632850
2476	11.3	3.6	3.3	chr3	90162933	90163137	(108132422)	+	L1MA5A	LINE/L1	6083	6294	(3)	2632849
8845	18.5	3.4	0.0	chr3	99158574	99160149	(99135410)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2639923
196	29.7	13.9	0.9	chr3	101573623	101573734	(96721825)	+	MIRb	SINE/MIR	85	213	(55)	2643207
1542	19.9	11.0	0.0	chr3	106214583	106214913	(92080646)	+	MER57E1	LTR/ERV1	1	372	(0)	2649237
1301	24.9	3.5	4.1	chr3	107869685	107870144	(90425415)	C	L1ME3A	LINE/L1	(34)	6139	5683	2651463
1670	16.6	9.1	1.5	chr3	107870145	107870487	(90425072)	C	MER57E1	LTR/ERV1	(0)	372	1	2651464
323	26.1	12.8	0.8	chr3	107870488	107870618	(90424941)	C	L1ME3A	LINE/L1	(487)	5686	5538	2651463
1083	27.2	3.0	1.9	chr3	110623576	110623939	(87671620)	+	MER57E1	LTR/ERV1	2	369	(3)	2655487
498	19.5	2.5	0.8	chr3	110624118	110624236	(87671323)	+	L1MB4	LINE/L1	6054	6174	(6)	2655488
2457	19.3	2.2	0.2	chr3	112096174	112096614	(86198945)	C	LTR47A	LTR/ERVL	(0)	452	3	2657382
726	19.1	8.5	1.1	chr3	112767894	112768068	(85527491)	+	LTR54B	LTR/ERV1	308	496	(2)	2658276
2365	9.3	2.7	0.0	chr3	112768160	112768448	(85527111)	+	AluSc8	SINE/Alu	1	297	(14)	2658277
12	24.4	3.2	4.6	chr3	115784294	115784356	(82511203)	+	G-rich	Low_complexity	1	65	(0)	2662585
23	28.4	2.0	3.0	chr3	115784357	115784388	(82511171)	+	(GCGG)n	Simple_repeat	5	101	(0)	2662586
1473	30.2	0.8	0.2	chr3	118740289	118740686	(79554873)	C	LTR33B	LTR/ERVL	(18)	485	86	2666616
2052	16.4	3.6	3.9	chr3	118740738	118741149	(79554410)	C	MER57D	LTR/ERV1	(0)	411	1	2666617
1902	16.8	1.1	0.6	chr3	119258012	119258376	(79037183)	C	MER57D	LTR/ERV1	(0)	411	45	2667282
2393	10.9	0.0	1.7	chr3	119467795	119468096	(78827463)	+	AluSx	SINE/Alu	1	297	(15)	2667625
1753	18.4	18.0	1.9	chr3	119468097	119468479	(78827080)	C	LTR54	LTR/ERV1	(42)	468	1	2667624
75	23.4	1.8	3.5	chr3	122522114	122522338	(75773221)	+	(AT)n	Simple_repeat	1	229	(0)	2672132
1970	14.0	11.4	1.1	chr3	122522342	122522617	(75772942)	C	MER57C2	LTR/ERV1	(27)	407	104	2672133
2522	9.7	0.3	0.0	chr3	122522618	122522917	(75772642)	+	AluSq2	SINE/Alu	2	302	(11)	2672134
2349	14.9	0.8	0.3	chr3	125332463	125332845	(72962714)	+	MER57C1	LTR/ERV1	1	385	(0)	2676804
1668	20.8	5.1	3.0	chr3	127320214	127320650	(70974909)	+	LTR106_Mam	LTR	258	704	(4)	2679849
1817	7.3	4.1	0.0	chr3	128608825	128609056	(69686503)	C	AluSg	SINE/Alu	(32)	278	37	2682036
462	28.8	3.8	0.0	chr3	129022929	129023080	(69272479)	+	MER113	DNA/hAT-Charlie	164	321	(200)	2682892
639	16.2	0.0	0.0	chr3	129023081	129023191	(69272368)	C	MER57D	LTR/ERV1	(0)	411	301	2682893
601	15.9	5.7	7.7	chr3	129023190	129023307	(69272252)	C	MER57D	LTR/ERV1	(271)	140	16	2682893
2344	5.9	0.0	7.1	chr3	129023308	129023631	(69271928)	C	AluY	SINE/Alu	(10)	301	1	2682894
2270	9.8	0.6	2.8	chr3	129643647	129643964	(68651595)	+	AluSx	SINE/Alu	1	311	(1)	2684154
1510	20.3	7.5	8.4	chr3	129643973	129644375	(68651184)	C	MER57B2	LTR/ERV1	(2)	401	3	2684155
545	27.1	2.2	4.3	chr3	132180364	132180548	(66115011)	C	MER91B	DNA/hAT-Tip100	(9)	181	1	2688040
12	11.6	3.3	3.2	chr3	134250381	134250410	(64045149)	+	(CCGGC)n	Simple_repeat	1	31	(0)	2691135
29	26.3	2.1	1.1	chr3	134250496	134250588	(64044971)	+	(CGG)n	Simple_repeat	1	95	(0)	2691136
12	9.6	2.4	9.5	chr3	134250703	134250743	(64044816)	+	(GCCCCGA)n	Simple_repeat	1	42	(0)	2691137
1669	19.2	8.6	7.9	chr3	141179837	141180242	(57115317)	+	MER57D	LTR/ERV1	3	411	(0)	2701897
235	15.5	6.5	10.8	chr3	141180243	141180288	(57115271)	C	MIRb	SINE/MIR	(34)	234	188	2701896
481	34.2	16.5	1.0	chr3	141782101	141782687	(56512872)	C	L2	LINE/L2	(553)	2866	2171	2702837
1085	9.4	0.0	0.0	chr3	141782691	141782828	(56512731)	+	AluYa8	SINE/Alu	167	304	(6)	2702838
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
872	18.9	3.8	1.1	chr3	143864296	143864472	(54431087)	+	MER5A	DNA/hAT-Charlie	7	188	(1)	2706257
1427	17.9	11.6	4.1	chr3	143864594	143864718	(54430841)	C	MER57E1	LTR/ERV1	(0)	372	255	2706258
2359	11.9	0.0	0.0	chr3	143864719	143865029	(54430530)	C	AluSc8	SINE/Alu	(0)	311	1	2706259
1905	15.5	0.6	7.2	chr3	149197600	149197961	(49097598)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	2713202
4973	21.1	8.9	3.9	chr3	149197962	149198287	(49097272)	+	L1MC5	LINE/L1	8745	9117	(187)	2713199
1216	14.4	3.4	0.4	chr3	149886829	149887058	(48408501)	C	L1MA2	LINE/L1	(3162)	2984	2748	2714368
707	21.2	4.2	5.9	chr3	149887056	149887225	(48408334)	+	L1M1	LINE/L1	176	342	(7223)	2714369
886	16.7	0.0	0.0	chr3	149887225	149887380	(48408179)	+	L1M4	LINE/L1	2519	2674	(3472)	2714370
1410	16.5	0.5	0.0	chr3	149887384	149887595	(48407964)	C	AluJr	SINE/Alu	(95)	217	5	2714371
528	28.0	9.1	1.3	chr3	150106642	150106793	(48188766)	C	MIR	SINE/MIR	(66)	202	35	2714697
24	23.2	3.4	3.3	chr3	150384631	150384718	(47910841)	+	(TTTTC)n	Simple_repeat	1	91	(0)	2715151
12	19.4	4.7	2.2	chr3	152268641	152268683	(46026876)	+	(CGGCTC)n	Simple_repeat	1	45	(0)	2717973
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
16	0.0	0.0	0.0	chr3	158644981	158644998	(39650561)	+	(T)n	Simple_repeat	1	18	(0)	2727076
1765	15.3	14.7	2.1	chr3	161404928	161405361	(36890198)	+	LTR54B	LTR/ERV1	1	498	(0)	2731294
6622	16.4	2.6	5.0	chr3	168108423	168109698	(30185861)	C	ERVL-B4-int	LTR/ERVL	(181)	5533	4289	2739609
486	19.8	3.4	0.0	chr3	168109692	168109777	(30185782)	+	ERVL-B4-int	LTR/ERVL	3544	3632	(2082)	2739611
1566	13.5	1.2	0.0	chr3	168109776	168110012	(30185547)	C	ERVL-B4-int	LTR/ERVL	(3652)	2062	1823	2739609
9181	17.9	2.3	2.2	chr3	168110018	168111640	(30183919)	C	ERVL-B4-int	LTR/ERVL	(4001)	1713	88	2739609
11	21.8	0.0	4.9	chr3	169662565	169662605	(28632954)	+	(GCCCCC)n	Simple_repeat	1	41	(0)	2741631
13	25.5	5.5	2.6	chr3	169662638	169662710	(28632849)	+	(CGCAG)n	Simple_repeat	1	77	(0)	2741632
12	24.9	2.0	3.9	chr3	179148365	179148415	(19147144)	+	(TGC)n	Simple_repeat	1	52	(0)	2755688
18	28.2	1.3	2.6	chr3	179148416	179148454	(19147105)	+	(CCGCTG)n	Simple_repeat	5	92	(0)	2755689
12	5.5	0.0	0.0	chr3	179148530	179148548	(19147011)	+	(CGC)n	Simple_repeat	1	19	(0)	2755690
371	29.7	8.8	7.7	chr3	179781302	179781469	(18514090)	C	MIRb	SINE/MIR	(72)	196	23	2756873
646	28.5	5.8	4.0	chr3	179781851	179782051	(18513508)	C	MIRb	SINE/MIR	(8)	260	56	2756874
1521	19.3	12.1	1.4	chr3	182935866	182936291	(15359268)	+	LTR54B	LTR/ERV1	2	479	(19)	2761791
16	6.8	6.5	0.0	chr3	187139537	187139578	(11155981)	+	(GGCCCC)n	Simple_repeat	1	44	(0)	2769652
12	25.6	0.0	0.0	chr3	193905974	193906010	(4389549)	+	A-rich	Low_complexity	1	37	(0)	2780207
14	0.0	0.0	0.0	chr3	196432404	196432421	(1863138)	+	(CCG)n	Simple_repeat	1	18	(0)	2784995
1471	16.6	7.8	0.0	chr4	675665	675972	(189538583)	+	MER1B	DNA/hAT-Charlie	1	334	(5)	2789394
340	17.1	2.6	1.3	chr4	980760	980836	(189233719)	+	MER107	DNA/hAT-Charlie	71	148	(52)	2789746
439	34.1	3.7	1.5	chr4	980908	981172	(189233383)	+	HERVL74-int	LTR/ERVL	1671	1941	(3744)	2789747
1815	17.6	2.6	0.0	chr4	1264612	1264907	(188949648)	+	AluJo	SINE/Alu	1	304	(8)	2790043
1059	22.8	14.6	1.9	chr4	1264908	1265184	(188949371)	+	LTR54B	LTR/ERV1	139	462	(36)	2790042
630	15.1	10.9	0.0	chr4	1265185	1265290	(188949265)	+	FLAM_A	SINE/Alu	1	119	(23)	2790044
1059	22.8	14.6	1.9	chr4	1265291	1265318	(188949237)	+	LTR54B	LTR/ERV1	463	492	(6)	2790042
19	19.9	0.0	5.3	chr4	8871734	8871790	(181342765)	+	G-rich	Low_complexity	1	57	(0)	2802395
11	13.9	0.0	8.1	chr4	8871877	8871913	(181342642)	+	G-rich	Low_complexity	1	37	(0)	2802396
310	39.0	2.3	1.9	chr4	9271577	9271832	(180942723)	C	L1M4	LINE/L1	(1192)	4954	4698	2802923
38	12.6	0.0	0.0	chr4	9271890	9271958	(180942597)	+	(CA)n	Simple_repeat	1	69	(0)	2802924
23196	7.1	2.3	1.7	chr4	12428750	12429536	(177785019)	C	HERVIP10FH-int	LTR/ERV1	(2958)	2144	1330	2807727
32	0.0	0.0	0.0	chr4	12429537	12429566	(177784989)	+	(T)n	Simple_repeat	1	30	(0)	2807729
23196	13.7	3.1	8.0	chr4	12429567	12431107	(177783448)	C	HERVIP10FH-int	LTR/ERV1	(3773)	1329	1	2807727
430	29.3	5.7	8.9	chr4	13024007	13024208	(177190347)	+	MIR3	SINE/MIR	4	198	(10)	2808681
3131	10.2	0.5	0.0	chr4	13024229	13024658	(177189897)	C	MER57A1	LTR/ERV1	(0)	432	1	2808682
5739	18.1	4.8	2.8	chr4	13788202	13789327	(176425228)	C	L1M4	LINE/L1	(2356)	3790	2644	2809858
1981	16.9	8.0	0.0	chr4	13789328	13789705	(176424850)	C	MER57D	LTR/ERV1	(0)	411	1	2809860
5739	18.1	4.8	2.8	chr4	13789706	13790084	(176424471)	C	L1M4	LINE/L1	(3503)	2643	2254	2809858
2525	20.9	2.7	2.9	chr4	14835456	14836012	(175378543)	+	MER89	LTR/ERV1	4	559	(0)	2811636
29	7.9	0.0	0.0	chr4	18021687	18021727	(172192828)	+	(GCG)n	Simple_repeat	1	41	(0)	2817243
13	23.9	0.0	2.4	chr4	18021876	18021916	(172192639)	+	(CTCCC)n	Simple_repeat	1	41	(0)	2817244
1024	25.0	10.0	4.7	chr4	30101563	30101948	(160112607)	C	MER57D	LTR/ERV1	(2)	409	1	2836262
344	21.9	3.7	5.4	chr4	31220940	31221050	(158993505)	+	MLT1L	LTR/ERVL-MaLR	121	229	(381)	2837784
2049	16.0	1.5	9.3	chr4	31221055	31221496	(158993059)	C	MER57D	LTR/ERV1	(4)	407	1	2837785
2486	14.8	3.0	0.0	chr4	38470588	38470971	(151743584)	+	MER57B2	LTR/ERV1	8	403	(0)	2847835
1192	25.3	12.0	1.6	chr4	38470986	38471256	(151743299)	+	MLT1J2	LTR/ERVL-MaLR	1	273	(175)	2847836
2160	12.2	1.4	0.7	chr4	38471257	38471543	(151743012)	+	AluSq	SINE/Alu	1	289	(24)	2847837
34	2.8	0.0	0.0	chr4	45911829	45911864	(144302691)	+	(T)n	Simple_repeat	1	36	(0)	2860124
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
1952	9.6	1.5	7.2	chr4	52142859	52142906	(138071649)	C	L1MA2	LINE/L1	(0)	6304	6261	2865776
2881	8.8	1.2	1.0	chr4	52142907	52143306	(138071249)	C	MER57B1	LTR/ERV1	(0)	401	1	2865777
22	5.6	2.4	4.8	chr4	54598653	54598693	(135615862)	+	(TAA)n	Simple_repeat	1	42	(0)	2869598
314	25.0	2.2	0.0	chr4	54598714	54598801	(135615754)	+	L1M5	LINE/L1	5724	5813	(381)	2869594
2803	13.7	1.6	0.0	chr4	54598808	54599232	(135615323)	C	MER57A1	LTR/ERV1	(0)	432	1	2869599
1431	16.7	9.7	0.0	chr4	56465821	56466119	(133748436)	C	MER1B	DNA/hAT-Charlie	(8)	331	1	2872650
1867	10.0	10.3	0.4	chr4	56466230	56466509	(133748046)	+	AluSx1	SINE/Alu	1	311	(1)	2872651
933	11.0	0.0	0.8	chr4	56466635	56466761	(133747794)	+	FLAM_C	SINE/Alu	6	131	(12)	2872652
1791	12.3	3.3	2.7	chr4	57162565	57162865	(133051690)	+	MER57D	LTR/ERV1	109	411	(0)	2874071
2628	5.4	0.0	0.0	chr4	60263985	60264280	(129950275)	C	AluY	SINE/Alu	(15)	296	1	2877975
1527	17.2	0.0	3.8	chr4	60264281	60264439	(129950116)	+	MER57C2	LTR/ERV1	277	434	(0)	2877973
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
12	25.4	4.7	3.0	chr4	67545660	67545723	(122668832)	+	(CCTCCAG)n	Simple_repeat	1	67	(0)	2887099
1557	17.4	6.0	0.7	chr4	71800880	71801324	(118413231)	+	L1M4	LINE/L1	5023	5492	(682)	2892676
420	36.3	4.0	0.4	chr4	71801362	71801599	(118412956)	C	L1MEc	LINE/L1	(6025)	375	129	2892677
2073	16.3	8.3	1.9	chr4	75834215	75834731	(114379824)	C	LTR54B	LTR/ERV1	(2)	508	1	2898181
2136	11.8	1.2	2.4	chr4	78036397	78036733	(112177822)	C	MER1B	DNA/hAT-Charlie	(6)	333	1	2901603
2954	10.9	2.5	0.0	chr4	81119992	81120412	(109094143)	+	MER57A1	LTR/ERV1	1	432	(0)	2905702
12323	13.7	1.9	4.1	chr4	81120413	81121804	(109092751)	C	L1MC1	LINE/L1	(1602)	4544	3183	2905699
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
21	10.7	0.0	0.0	chr4	86962136	86962165	(103252390)	+	(T)n	Simple_repeat	1	30	(0)	2914702
436	31.5	15.6	0.5	chr4	86962258	86962480	(103252075)	+	MIRb	SINE/MIR	3	265	(3)	2914703
2074	15.1	10.1	0.5	chr4	87290150	87290595	(102923960)	+	LTR54B	LTR/ERV1	3	496	(2)	2915253
2301	11.4	0.3	0.0	chr4	87290680	87290976	(102923579)	C	AluSx1	SINE/Alu	(13)	299	2	2915254
15	23.7	9.2	2.5	chr4	88007541	88007649	(102206906)	+	(GGCGGACG)n	Simple_repeat	1	119	(0)	2916370
15	12.0	7.9	2.4	chr4	88007678	88007715	(102206840)	+	(GC)n	Simple_repeat	1	41	(0)	2916371
22263	9.9	4.9	1.8	chr4	88880093	88886306	(101328249)	+	L1PB1	LINE/L1	35	6498	(369)	2917806
23	0.0	0.0	0.0	chr4	94757884	94757908	(95456647)	+	(A)n	Simple_repeat	1	25	(0)	2925516
13	20.7	2.1	4.1	chr4	102827165	102827212	(87387343)	+	(CGCGCC)n	Simple_repeat	1	49	(0)	2936199
196	35.6	4.2	0.9	chr4	102869781	102869896	(87344659)	+	L3	LINE/CR1	3241	3360	(739)	2936284
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
1330	26.1	14.1	1.4	chr4	106316918	106317609	(83896946)	C	L2a	LINE/L2	(0)	3426	2636	2940650
1885	19.6	1.7	2.2	chr4	107468745	107469157	(82745398)	+	MER57D	LTR/ERV1	1	411	(0)	2942115
1774	16.9	0.9	0.6	chr4	107780626	107780936	(82433619)	C	LTR18C	LTR/ERVL	(13)	332	1	2942501
1757	12.6	6.2	7.3	chr4	108514243	108514585	(81699970)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2943556
15	12.2	0.0	0.0	chr4	109302706	109302732	(80911823)	+	(GTGA)n	Simple_repeat	1	27	(0)	2944734
13	25.1	6.6	0.0	chr4	109302732	109302792	(80911763)	+	(GCGCCCG)n	Simple_repeat	1	65	(0)	2944735
14	13.9	3.1	0.0	chr4	112514924	112514955	(77699600)	+	(CGCCCC)n	Simple_repeat	1	33	(0)	2949283
1015	28.0	7.2	3.4	chr4	115126272	115126655	(75087900)	+	BLACKJACK	DNA/hAT-Blackjack	1	400	(2569)	2952880
2197	24.8	11.0	8.5	chr4	115126676	115127977	(75086578)	+	BLACKJACK	DNA/hAT-Blackjack	487	1824	(1145)	2952881
322	7.1	0.0	0.0	chr4	118061587	118061628	(72152927)	+	MADE1	DNA/TcMar-Mariner	1	42	(38)	2956389
483	20.7	10.5	1.8	chr4	118061639	118061751	(72152804)	+	L2a	LINE/L2	3300	3423	(3)	2956387
549	20.0	1.5	5.8	chr4	118061752	118061785	(72152770)	C	L1MEd	LINE/L1	(5448)	1828	1798	2956386
2579	11.4	2.8	0.0	chr4	118061786	118062171	(72152384)	C	MER57B1	LTR/ERV1	(0)	401	5	2956390
549	20.0	1.5	5.8	chr4	118062172	118062274	(72152281)	C	L1MEd	LINE/L1	(5479)	1797	1697	2956386
28	11.8	0.0	0.0	chr4	119628600	119628645	(70585910)	+	(CTG)n	Simple_repeat	1	46	(0)	2958741
501	31.6	9.9	4.6	chr4	119641387	119641583	(70572972)	+	L2a	LINE/L2	3055	3261	(165)	2958763
1298	20.7	12.5	2.7	chr4	119641584	119642029	(70572526)	+	LTR54B	LTR/ERV1	1	496	(2)	2958765
501	31.6	9.9	4.6	chr4	119642030	119642182	(70572373)	+	L2a	LINE/L2	3262	3426	(0)	2958763
1980	16.1	1.8	1.5	chr4	120265631	120265965	(69948590)	+	MER1B	DNA/hAT-Charlie	4	339	(0)	2959582
2077	17.9	1.1	1.3	chr4	120526672	120527045	(69687510)	+	THE1C	LTR/ERVL-MaLR	1	373	(2)	2959915
942	23.4	4.0	1.6	chr4	120527063	120527374	(69687181)	C	MER57D	LTR/ERV1	(20)	391	33	2959916
75	8.5	1.7	1.7	chr4	121380133	121380248	(68834307)	+	(GA)n	Simple_repeat	1	118	(0)	2961003
364	28.6	9.1	3.5	chr4	121824278	121824422	(68390133)	+	MIRb	SINE/MIR	95	248	(20)	2961636
26	0.0	0.0	0.0	chr4	122652629	122652653	(67561902)	+	(T)n	Simple_repeat	1	25	(0)	2962778
27635	0.4	0.0	0.0	chr4	122652659	122656850	(67557705)	C	L1HS	LINE/L1	(0)	6155	1964	2962779
403	31.2	6.3	4.2	chr4	126986530	126986793	(63227762)	C	Charlie8	DNA/hAT-Charlie	(788)	1640	1371	2968516
836	26.9	11.0	6.2	chr4	126986909	126987296	(63227259)	C	MER57D	LTR/ERV1	(2)	409	1	2968518
10474	5.7	10.0	0.1	chr4	127963381	127964801	(62249754)	C	LTR12C	LTR/ERV1	(0)	1579	3	2969836
883	19.9	13.7	5.8	chr4	128709208	128709603	(61504952)	C	LTR50	LTR/ERVL	(178)	617	99	2971166
2708	11.4	1.2	0.0	chr4	137923474	137923869	(52290686)	+	MER57B1	LTR/ERV1	1	401	(0)	2982265
1937	14.1	1.8	4.0	chr4	138050558	138050904	(52163651)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2982409
18	4.2	0.0	0.0	chr4	138242309	138242333	(51972222)	+	(CTG)n	Simple_repeat	1	25	(0)	2982633
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
12	7.9	7.4	0.0	chr4	140151677	140151703	(50062852)	+	G-rich	Low_complexity	1	29	(0)	2985798
12	23.4	0.0	4.5	chr4	140151741	140151784	(50062771)	+	A-rich	Low_complexity	1	44	(0)	2985799
204	24.7	16.2	1.1	chr4	145935789	145935882	(44278673)	+	LFSINE_Vert	SINE/tRNA	266	376	(83)	2993604
21	23.5	1.5	2.9	chr4	150078208	150078275	(40136280)	+	(CTC)n	Simple_repeat	1	69	(0)	2999259
12	19.5	0.0	8.3	chr4	151015367	151015414	(39199141)	+	G-rich	Low_complexity	1	48	(0)	3000636
1828	18.5	4.6	7.1	chr4	152223387	152223851	(37990704)	+	LTR54B	LTR/ERV1	2	454	(44)	3002658
338	35.3	10.5	3.0	chr4	152567467	152567764	(37646791)	+	MLT1K	LTR/ERVL-MaLR	194	516	(79)	3003210
13	8.1	3.6	3.5	chr4	153222855	153222882	(36991673)	+	GA-rich	Low_complexity	1	29	(0)	3004257
20	6.8	0.0	0.0	chr4	156193534	156193564	(34020991)	+	(AAAAAC)n	Simple_repeat	1	31	(0)	3008482
286	36.3	3.9	3.4	chr4	162238648	162238824	(27975731)	C	LTR78	LTR/ERV1	(689)	615	438	3016440
1254	19.1	5.6	9.7	chr4	162238876	162239047	(27975508)	+	MLT2D	LTR/ERVL	1	186	(228)	3016441
4095	19.4	2.9	2.0	chr4	166113645	166114530	(24100025)	+	L1MA7	LINE/L1	5398	6291	(0)	3021976
1166	18.8	0.5	0.0	chr4	166114549	166114779	(24099776)	+	MER57D	LTR/ERV1	178	409	(25)	3021977
923	32.7	7.5	2.4	chr4	166114960	166115376	(24099179)	C	LTR67B	LTR/ERVL	(157)	463	24	3021978
28639	0.6	0.0	0.0	chr4	166569977	166576007	(23638548)	+	L1HS	LINE/L1	124	6155	(0)	3022531
13	13.2	6.1	0.0	chr4	170026518	170026550	(20188005)	+	G-rich	Low_complexity	1	35	(0)	3027259
1938	18.2	2.0	7.8	chr4	170797319	170797752	(19416803)	+	MER57D	LTR/ERV1	4	411	(0)	3028191
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
12	20.8	0.0	2.9	chr4	173335389	173335423	(16879132)	+	(CTGGC)n	Simple_repeat	1	35	(0)	3031451
2570	14.2	0.2	0.0	chr4	179019225	179019624	(11194931)	+	MER57B1	LTR/ERV1	1	401	(0)	3038970
16	16.0	4.5	2.2	chr4	180059139	180059182	(10155373)	+	(GGC)n	Simple_repeat	1	46	(0)	3040278
627	29.7	5.7	6.7	chr4	183895478	183895762	(6318793)	+	L2a	LINE/L2	3144	3425	(1)	3045763
3243	12.5	2.9	3.5	chr4	183903778	183904292	(6310263)	C	MER1A	DNA/hAT-Charlie	(0)	529	18	3045774
2863	10.8	0.2	0.5	chr4	184234120	184234519	(5980036)	+	MER57B1	LTR/ERV1	1	399	(2)	3046229
2694	12.3	1.0	2.0	chr4	184234520	184234638	(5979917)	C	MER57B1	LTR/ERV1	(285)	116	1	3046228
1856	15.0	10.4	7.3	chr4	184342283	184342720	(5871835)	+	LTR54B	LTR/ERV1	1	453	(45)	3046407
1941	13.7	0.0	1.4	chr4	184342722	184343005	(5871550)	+	AluJb	SINE/Alu	2	281	(31)	3046408
52	0.0	0.0	0.0	chr4	184343006	184343052	(5871503)	+	(ATAG)n	Simple_repeat	1	47	(0)	3046409
1311	21.9	16.1	0.9	chr4	184552816	184553151	(5661404)	+	MER57E2	LTR/ERV1	4	400	(2)	3046783
677	21.1	0.0	0.0	chr4	184553161	184553274	(5661281)	C	FLAM_A	SINE/Alu	(27)	115	2	3046784
787	22.6	7.2	4.3	chr4	188170584	188170901	(2043654)	+	MER57D	LTR/ERV1	122	430	(4)	3052148
311	33.7	3.7	2.2	chr4	188170911	188171095	(2043460)	+	LTR78	LTR/ERV1	204	391	(913)	3052149
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
19	0.0	0.0	0.0	chr5	1020670	1020690	(180517569)	+	(T)n	Simple_repeat	1	21	(0)	3055903
1449	25.7	12.9	9.4	chr5	2227709	2228868	(179309391)	+	L1M8	LINE/L1	459	1665	(690)	3057057
1775	17.6	12.2	0.0	chr5	4868629	4868980	(176669279)	+	MER57B1	LTR/ERV1	1	401	(0)	3059884
1658	16.7	3.5	8.0	chr5	6222121	6222491	(175315768)	+	MER57E1	LTR/ERV1	1	359	(13)	3061535
2033	12.4	1.3	2.9	chr5	6222492	6222797	(175315462)	C	AluSx1	SINE/Alu	(11)	301	1	3061536
363	34.6	6.0	0.0	chr5	10887667	10887868	(170650391)	C	MIRb	SINE/MIR	(10)	258	44	3067600
1637	20.1	12.9	0.9	chr5	10888095	10888530	(170649729)	C	LTR54B	LTR/ERV1	(2)	496	1	3067601
323	25.0	1.2	0.0	chr5	13902596	13902679	(167635580)	C	MER58A	DNA/hAT-Charlie	(60)	164	80	3071442
1097	28.2	8.6	5.8	chr5	13902800	13904313	(167633946)	+	L1MEd	LINE/L1	560	2176	(4927)	3071443
2050	12.7	1.0	0.3	chr5	14911129	14911428	(166626831)	+	AluJb	SINE/Alu	1	302	(10)	3072863
2370	11.6	3.5	4.9	chr5	14911429	14911791	(166626468)	C	MER57B1	LTR/ERV1	(30)	371	1	3072862
2170	13.4	0.0	0.3	chr5	16050109	16050415	(165487844)	+	AluSx1	SINE/Alu	1	306	(6)	3074456
12	20.2	0.0	6.7	chr5	16050422	16050466	(165487793)	+	A-rich	Low_complexity	1	45	(0)	3074457
951	19.1	29.8	0.4	chr5	16050497	16050758	(165487501)	C	MER57E1	LTR/ERV1	(0)	372	1	3074458
381	18.1	3.5	0.0	chr5	16050781	16050863	(165487396)	+	MER57E1	LTR/ERV1	176	261	(111)	3074459
30	18.2	0.0	0.0	chr5	17217607	17217664	(164320595)	+	(GGC)n	Simple_repeat	1	58	(0)	3076467
16	20.9	2.9	5.7	chr5	17217831	17217898	(164320361)	+	(GCCCC)n	Simple_repeat	1	70	(0)	3076468
223	21.8	11.7	1.2	chr5	27012989	27013058	(154525201)	C	MIR	SINE/MIR	(5)	263	189	3089305
1620	20.6	6.2	3.1	chr5	27013061	27013420	(154524839)	+	MER57E1	LTR/ERV1	1	372	(0)	3089306
481	32.2	12.2	5.1	chr5	27013425	27013758	(154524501)	+	MLT1I	LTR/ERVL-MaLR	18	378	(33)	3089307
1126	27.2	2.7	2.5	chr5	27107645	27108010	(154430249)	C	MER57E1	LTR/ERV1	(1)	371	5	3089433
1627	11.2	0.5	0.5	chr5	32536143	32536365	(149001894)	+	AluSq2	SINE/Alu	86	308	(5)	3097064
3266	10.1	8.5	3.8	chr5	32536385	32536887	(149001372)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3097065
21	17.8	0.0	2.1	chr5	33479714	33479760	(148058499)	+	(TTCC)n	Simple_repeat	1	47	(0)	3098409
2039	14.8	4.9	3.1	chr5	33479775	33480157	(148058102)	C	MER57B1	LTR/ERV1	(0)	401	12	3098410
1919	18.1	0.0	0.0	chr5	34436397	34436699	(147101560)	+	AluJb	SINE/Alu	2	304	(8)	3099787
1375	21.4	5.9	8.4	chr5	34436700	34436748	(147101511)	+	Arthur1B	DNA/hAT-Tip100	1013	1056	(169)	3099786
1614	19.7	1.4	4.7	chr5	34436749	34437131	(147101128)	C	MER57E1	LTR/ERV1	(2)	370	1	3099788
900	18.7	16.3	6.0	chr5	34647863	34648130	(146890129)	+	AluJr	SINE/Alu	2	302	(10)	3100157
13	26.5	0.0	5.4	chr5	34648142	34648197	(146890062)	+	A-rich	Low_complexity	1	56	(0)	3100158
2218	14.1	1.2	0.3	chr5	39023953	39024286	(142513973)	C	MER1B	DNA/hAT-Charlie	(2)	337	1	3106969
888	21.0	3.0	3.0	chr5	39225274	39225629	(142312630)	+	MER57E1	LTR/ERV1	12	432	(2)	3107266
252	26.7	7.8	5.1	chr5	39225654	39225791	(142312468)	C	Charlie7a	DNA/hAT-Charlie	(130)	142	1	3107264
2886	12.2	1.6	0.0	chr5	41874496	41874922	(139663337)	+	MER57C2	LTR/ERV1	1	434	(0)	3110945
1686	18.9	6.0	3.6	chr5	41874923	41875153	(139663106)	C	MLT1A0	LTR/ERVL-MaLR	(126)	239	1	3110944
2962	10.1	0.7	0.0	chr5	43203250	43203647	(138334612)	+	MER57B1	LTR/ERV1	1	401	(0)	3112738
2386	8.8	0.0	0.0	chr5	43203744	43204038	(138334221)	+	AluSq	SINE/Alu	1	295	(18)	3112739
2990	11.8	1.6	0.2	chr5	43598789	43599214	(137939045)	+	MER57A1	LTR/ERV1	1	432	(0)	3113329
1529	18.0	15.9	0.5	chr5	50716287	50716705	(130821554)	C	LTR54B	LTR/ERV1	(2)	496	1	3116860
4838	13.0	0.1	1.3	chr5	56334878	56335464	(125202795)	C	MSTA-int	LTR/ERVL-MaLR	(115)	1516	933	3124882
2020	11.2	1.2	1.2	chr5	56335454	56335779	(125202480)	C	MSTA-int	LTR/ERVL-MaLR	(1305)	326	1	3124882
26	7.8	4.9	0.0	chr5	62224012	62224052	(119314207)	+	(AG)n	Simple_repeat	1	43	(0)	3133388
53	0.0	0.0	0.0	chr5	62224053	62224097	(119314162)	+	(GT)n	Simple_repeat	1	45	(0)	3133389
18	12.0	0.0	0.0	chr5	62224098	62224124	(119314135)	+	(CG)n	Simple_repeat	1	27	(0)	3133390
205	32.5	4.9	0.0	chr5	62224295	62224371	(119313888)	+	MIR3	SINE/MIR	85	165	(43)	3133391
15	0.0	0.0	0.0	chr5	66596841	66596859	(114941400)	+	(GCC)n	Simple_repeat	1	19	(0)	3139672
516	19.5	1.2	7.9	chr5	72286854	72286954	(109251305)	+	L1MD	LINE/L1	4998	5096	(1050)	3148748
2101	11.3	5.4	2.5	chr5	72286955	72287280	(109250979)	+	MER1B	DNA/hAT-Charlie	3	338	(1)	3148749
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
260	16.4	1.8	1.8	chr5	73763649	73763704	(107774555)	+	L2a	LINE/L2	3371	3426	(0)	3151037
15	5.6	0.0	0.0	chr5	77974796	77974814	(103563445)	+	(TG)n	Simple_repeat	1	19	(0)	3157472
2167	16.0	0.3	0.3	chr5	77981360	77981698	(103556561)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3157481
1987	19.7	6.3	6.0	chr5	77981705	77982207	(103556052)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3157482
3101	12.4	0.9	0.0	chr5	79959311	79959738	(101578521)	+	MER57A1	LTR/ERV1	1	432	(0)	3160625
548	28.0	7.9	3.6	chr5	79959739	79959862	(101578397)	C	Charlie18a	DNA/hAT-Charlie	(168)	174	52	3160624
471	29.9	8.2	0.2	chr5	82312055	82312218	(99226041)	+	MIR	SINE/MIR	42	223	(45)	3164448
423	21.9	2.8	0.0	chr5	82374406	82374510	(99163749)	C	L2c	LINE/L2	(1)	3386	3279	3164546
1078	17.8	10.8	0.3	chr5	82374693	82375023	(99163236)	C	MER57E1	LTR/ERV1	(6)	366	1	3164547
1128	24.3	8.8	4.3	chr5	84681017	84681408	(96856851)	C	MER57D	LTR/ERV1	(0)	411	1	3167581
210	29.5	0.0	7.1	chr5	91279381	91279464	(90258795)	C	MER5A	DNA/hAT-Charlie	(3)	186	109	3175941
221	30.6	8.3	2.6	chr5	91279480	91279593	(90258666)	C	MER5A	DNA/hAT-Charlie	(68)	121	1	3175942
2356	4.5	3.1	1.1	chr5	91279720	91280029	(90258230)	C	AluY	SINE/Alu	(0)	311	1	3175943
1554	23.7	4.6	3.2	chr5	92786713	92786907	(88751352)	C	L1MC	LINE/L1	(1224)	4922	4724	3177898
1949	15.0	1.5	8.5	chr5	92786908	92787272	(88750987)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3177899
1554	23.7	4.6	3.2	chr5	92787273	92787608	(88750651)	C	L1MC	LINE/L1	(1423)	4723	4383	3177898
1285	21.4	9.0	5.6	chr5	96673281	96673676	(84864583)	C	MER57D	LTR/ERV1	(0)	411	1	3182934
14	21.5	7.6	1.4	chr5	98773829	98773866	(82764393)	+	(CGCTGCG)n	Simple_repeat	1	80	(25)	3185540
14	17.2	3.9	5.7	chr5	98773867	98773917	(82764342)	+	(GCT)n	Simple_repeat	1	53	(0)	3185541
1127	21.3	6.9	2.5	chr5	102036574	102036818	(79501441)	+	MSTB1	LTR/ERVL-MaLR	145	402	(30)	3189643
1860	16.1	1.2	6.9	chr5	102036819	102037178	(79501081)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3189644
1127	21.3	6.9	2.5	chr5	102037179	102037207	(79501052)	+	MSTB1	LTR/ERVL-MaLR	403	432	(0)	3189643
2265	15.6	0.5	0.3	chr5	104367891	104368270	(77169989)	+	MER57C1	LTR/ERV1	5	385	(0)	3192604
2184	15.4	8.8	1.0	chr5	106435067	106435466	(75102793)	+	MER57C2	LTR/ERV1	1	434	(0)	3195133
344	33.9	4.3	2.8	chr5	106435505	106435686	(75102573)	C	L2c	LINE/L2	(1197)	2222	2038	3195132
321	35.3	0.5	5.7	chr5	106493557	106493803	(75044456)	+	MLT1H-int	LTR/ERVL-MaLR	1	284	(1125)	3195209
273	27.9	4.4	4.9	chr5	106493814	106494039	(75044220)	+	L1M5	LINE/L1	4189	4413	(1733)	3195210
1149	25.1	7.8	2.6	chr5	106494042	106494480	(75043779)	C	LTR54B	LTR/ERV1	(0)	510	64	3195211
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
4338	12.6	1.4	2.4	chr5	106535765	106535989	(75002270)	C	L1PA13	LINE/L1	(508)	5655	5437	3195260
1574	18.4	12.5	3.8	chr5	109762820	109763270	(71774989)	C	LTR54B	LTR/ERV1	(2)	496	1	3199434
445	29.8	9.3	6.2	chr5	112710688	112710927	(68827332)	+	MIRb	SINE/MIR	7	254	(14)	3203155
203	31.9	7.5	8.3	chr5	112710951	112711056	(68827203)	+	L2	LINE/L2	1963	2061	(1358)	3203156
2245	12.7	0.0	4.0	chr5	112711057	112711409	(68826850)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3203157
2422	15.1	1.0	1.5	chr5	117039175	117039577	(64498682)	C	MER57B1	LTR/ERV1	(0)	401	1	3209071
181	40.0	1.2	0.0	chr5	117096199	117096283	(64441976)	+	AmnSINE1	SINE/5S-Deu-L2	69	154	(421)	3209151
867	29.8	4.2	2.9	chr5	117252453	117252682	(64285577)	+	L1ME4b	LINE/L1	412	652	(240)	3209385
2567	12.5	0.0	0.8	chr5	117252683	117253069	(64285190)	C	MER57C1	LTR/ERV1	(0)	385	2	3209386
867	29.8	4.2	2.9	chr5	117253070	117253284	(64284975)	+	L1ME4b	LINE/L1	653	862	(30)	3209385
2253	14.2	3.5	2.5	chr5	123297916	123298313	(58239946)	C	MER57E2	LTR/ERV1	(0)	402	1	3217189
407	36.3	0.5	3.9	chr5	130402798	130403029	(51135230)	+	MamRep137	DNA/TcMar-Tigger	109	332	(178)	3226532
1852	16.1	2.7	1.2	chr5	130403051	130403377	(51134882)	+	MER1B	DNA/hAT-Charlie	8	339	(0)	3226533
1106	21.5	10.6	2.5	chr5	131304866	131305271	(50232988)	C	L1ME1	LINE/L1	(16)	6163	5721	3227742
1264	20.5	2.1	0.4	chr5	131305275	131305553	(50232706)	C	MER57D	LTR/ERV1	(0)	411	128	3227743
2314	13.8	2.6	1.1	chr5	131305554	131305999	(50232260)	C	L1M2	LINE/L1	(785)	5355	4903	3227744
1834	11.6	4.7	0.0	chr5	131386070	131386353	(50151906)	C	MER1B	DNA/hAT-Charlie	(0)	339	42	3227874
376	11.4	6.9	0.0	chr5	132175682	132176404	(49361855)	+	(TA)n	Simple_repeat	1	773	(0)	3228992
431	18.4	5.8	9.3	chr5	132176428	132176497	(49361762)	C	MER20	DNA/hAT-Charlie	(115)	104	39	3228990
2153	13.8	1.2	2.0	chr5	132176498	132176838	(49361421)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	3228993
214	32.1	20.6	3.7	chr5	134865204	134865688	(46672571)	C	L2	LINE/L2	(337)	3082	2495	3233538
13654	18.4	5.9	1.1	chr5	135616819	135621080	(45917179)	C	L1MA4A	LINE/L1	(2354)	5208	718	3234566
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
246	26.2	20.2	2.8	chr5	137997769	137997874	(43540385)	+	Charlie1a	DNA/hAT-Charlie	5	133	(1322)	3237887
1144	17.8	10.7	3.1	chr5	137997892	137998211	(43540048)	+	MER57E1	LTR/ERV1	14	393	(10)	3237888
1673	20.5	17.3	1.9	chr5	137998215	137998800	(43539459)	+	Charlie1	DNA/hAT-Charlie	1458	2152	(629)	3237889
582	30.4	15.0	2.4	chr5	138035782	138036071	(43502188)	C	LTR78	LTR/ERV1	(421)	883	551	3237966
481	22.4	0.8	2.4	chr5	138036107	138036231	(43502028)	+	MER91B	DNA/hAT-Tip100	25	213	(3311)	3237967
1000	25.6	13.2	0.7	chr5	138036322	138036620	(43501639)	C	LTR78	LTR/ERV1	(768)	536	195	3237966
2498	4.4	2.0	0.3	chr5	138576175	138576467	(42961792)	+	AluY	SINE/Alu	1	298	(13)	3239129
4269	14.4	2.4	1.5	chr5	139130304	139131048	(42407211)	+	L1MB4	LINE/L1	5319	6070	(110)	3240124
15	7.2	6.7	0.0	chr5	139131094	139131129	(42407130)	+	(AAAAC)n	Simple_repeat	1	38	(0)	3240129
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
723	27.7	7.2	0.5	chr5	143129790	143129996	(38408263)	C	MIRb	SINE/MIR	(26)	242	21	3247212
190	26.0	3.9	0.0	chr5	143130106	143130155	(38408104)	C	MIRb	SINE/MIR	(183)	85	34	3247209
186	33.9	10.8	0.0	chr5	143448327	143448450	(38089809)	C	L2	LINE/L2	(474)	2945	2807	3247680
973	18.0	0.0	1.6	chr5	143448610	143448801	(38089458)	+	MER20	DNA/hAT-Charlie	1	189	(30)	3247681
2445	16.4	5.5	3.0	chr5	144013495	144013958	(37524301)	C	LTR06	LTR/ERV1	(0)	476	1	3248623
2052	19.4	0.5	1.5	chr5	144013959	144014326	(37523933)	C	MER57B2	LTR/ERV1	(37)	366	1	3248613
201	20.5	0.0	2.5	chr5	149272550	149272589	(32265670)	+	L3	LINE/CR1	4042	4080	(19)	3257347
1675	18.3	8.3	5.6	chr5	149922831	149923206	(31615053)	+	MER57D	LTR/ERV1	10	396	(15)	3258845
2185	10.6	0.0	0.0	chr5	149923216	149923499	(31614760)	+	AluSz6	SINE/Alu	1	284	(28)	3258846
12	16.3	2.8	2.7	chr5	151772241	151772276	(29765983)	+	(GCGCGT)n	Simple_repeat	1	37	(0)	3262615
6159	20.6	4.5	1.6	chr5	155027586	155029588	(26508671)	+	L1M1	LINE/L1	1240	3316	(4249)	3268517
1885	18.0	5.4	0.5	chr5	158267069	158267459	(23270800)	+	MER57D	LTR/ERV1	1	411	(0)	3274317
191	28.6	0.0	0.0	chr5	158267635	158267676	(23270583)	+	MER5A	DNA/hAT-Charlie	144	185	(4)	3274318
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
2191	24.7	10.3	8.9	chr5	170860074	170861267	(10676992)	+	L1MEg	LINE/L1	434	1652	(4524)	3294422
371	14.9	2.6	0.0	chr5	172076083	172076156	(9462103)	C	MER20	DNA/hAT-Charlie	(0)	219	144	3296621
4739	16.3	4.5	4.9	chr5	175457887	175458203	(6080056)	+	L1MB3	LINE/L1	5719	6024	(159)	3303440
2356	16.3	2.7	0.0	chr5	175458204	175458595	(6079664)	+	MER57B2	LTR/ERV1	1	403	(0)	3303443
4739	16.3	4.5	4.9	chr5	175458596	175458751	(6079508)	+	L1MB3	LINE/L1	6025	6183	(0)	3303440
588	32.9	10.2	1.4	chr5	176875100	176875592	(4662667)	+	L2c	LINE/L2	2187	2727	(692)	3306141
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
392	27.6	11.7	3.1	chr5	178730997	178731190	(2807069)	C	L2a	LINE/L2	(2)	3424	3212	3309715
2356	19.5	4.8	3.3	chr5	178858901	178859711	(2678548)	C	L1MA9	LINE/L1	(534)	5778	4872	3309952
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
2543	3.6	0.0	0.7	chr5	179632025	179632333	(1905926)	+	AluYa5	SINE/Alu	1	307	(4)	3311229
308	2.1	0.0	2.0	chr5	179632755	179632803	(1905456)	C	AluY	SINE/Alu	(0)	301	254	3311230
1132	10.2	3.2	3.2	chr5	179632804	179632851	(1905408)	C	AluSx1	SINE/Alu	(126)	186	137	3311231
1991	10.1	0.0	0.4	chr5	179632852	179633154	(1905105)	C	AluSc	SINE/Alu	(0)	309	3	3311232
261	31.2	13.5	6.1	chr5	179858037	179858149	(1680110)	+	Tigger15a	DNA/TcMar-Tigger	225	337	(378)	3311712
513	24.4	4.4	7.7	chr5	181169161	181169395	(368864)	+	L1M4	LINE/L1	5321	5547	(897)	3313773
688	0.0	0.0	0.0	chr5	181169610	181169682	(368577)	+	tRNA-Val-GTY	tRNA	1	73	(3)	3313774
825	19.6	0.7	0.0	chr5	181173370	181173517	(364742)	C	AluJb	SINE/Alu	(1)	311	163	3313783
702	0.0	0.0	0.0	chr5	181173650	181173724	(364535)	+	tRNA-Val-GTG	tRNA	1	75	(1)	3313784
366	36.3	8.1	0.4	chr6	3245341	3245578	(167560401)	+	MIRb	SINE/MIR	4	261	(7)	3318635
2423	9.9	0.0	0.0	chr6	3245884	3246195	(167559784)	C	AluSx1	SINE/Alu	(0)	312	1	3318636
31	2.0	5.6	3.5	chr6	3905863	3905918	(166900061)	+	(AAAAC)n	Simple_repeat	1	57	(0)	3319629
975	16.1	3.6	0.0	chr6	4640683	4640844	(166165135)	C	MER20	DNA/hAT-Charlie	(0)	219	52	3320788
2613	15.0	0.5	0.0	chr6	4640901	4641301	(166164678)	C	MER57B2	LTR/ERV1	(0)	403	1	3320789
3595	10.7	4.2	0.6	chr6	6584098	6584605	(164221374)	C	MER1A	DNA/hAT-Charlie	(0)	529	3	3323605
1054	21.9	3.0	3.5	chr6	7001089	7001194	(163804785)	C	MLT1C	LTR/ERVL-MaLR	(16)	451	342	3324370
1470	15.2	11.3	10.8	chr6	7001195	7001600	(163804379)	C	MER57D	LTR/ERV1	(3)	408	1	3324371
2085	16.7	0.5	3.5	chr6	9009515	9009918	(161796061)	C	MER57B2	LTR/ERV1	(0)	403	12	3327522
2347	15.2	2.5	1.8	chr6	11414565	11414965	(159391014)	C	MER57D	LTR/ERV1	(0)	411	8	3331191
1707	16.0	1.0	3.3	chr6	17901427	17901759	(152904220)	+	MER57E2	LTR/ERV1	29	402	(0)	3342030
1199	14.1	0.0	1.8	chr6	17901840	17902009	(152903970)	+	AluSz6	SINE/Alu	129	295	(17)	3342031
886	30.6	3.9	5.0	chr6	18770465	18770907	(152035072)	C	L2	LINE/L2	(1573)	1846	1409	3343554
3236	9.4	5.6	0.6	chr6	18770908	18771380	(152034599)	+	Charlie3	DNA/hAT-Charlie	1	498	(2208)	3343557
2581	17.7	1.4	0.0	chr6	20326176	20326604	(150479375)	+	MER57F	LTR/ERV1	1	435	(0)	3345823
978	8.8	13.8	0.0	chr6	26341510	26341646	(144464333)	C	AluSg	SINE/Alu	(150)	160	2	3355062
623	2.7	0.0	0.0	chr6	26743263	26743335	(144062644)	+	tRNA-Met	tRNA	1	73	(3)	3355770
259	29.4	10.4	6.4	chr6	27388386	27388541	(143417438)	+	MER5A	DNA/hAT-Charlie	27	189	(0)	3356814
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
1262	15.7	8.8	0.9	chr6	27836797	27837025	(142968954)	C	AluJo	SINE/Alu	(27)	285	37	3357679
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
628	4.0	0.0	0.0	chr6	28607156	28607230	(142198749)	+	tRNA-Ala-GCY_	tRNA	1	75	(0)	3358903
499	8.3	0.0	0.0	chr6	28729315	28729386	(142076593)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359110
662	0.0	0.0	0.0	chr6	28742952	28743024	(142062955)	C	tRNA-Arg-CGG	tRNA	(3)	73	1	3359137
722	0.0	0.0	0.0	chr6	28943622	28943703	(141862276)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3359515
1000	18.2	7.4	0.8	chr6	28956366	28956786	(141849193)	C	LTR54B	LTR/ERV1	(2)	496	8	3359535
410	31.4	3.6	2.7	chr6	29552229	29552390	(141253589)	C	MIR3	SINE/MIR	(32)	176	22	3360238
2216	12.6	7.8	4.2	chr6	29552528	29552933	(141253046)	C	MER57F	LTR/ERV1	(0)	435	14	3360239
285	36.0	1.7	1.7	chr6	29552942	29553057	(141252922)	+	L3	LINE/CR1	3510	3625	(474)	3360240
316	15.2	12.0	1.5	chr6	30672367	30672433	(140133546)	+	MER5A1	DNA/hAT-Charlie	92	166	(0)	3362000
2193	19.2	6.3	4.4	chr6	32798903	32799287	(138006692)	+	MLT1D	LTR/ERVL-MaLR	1	395	(110)	3365427
2572	13.8	8.3	0.0	chr6	32799288	32799685	(138006294)	C	MER57C2	LTR/ERV1	(0)	434	1	3365428
2067	10.2	2.6	6.8	chr6	33131896	33132220	(137673759)	+	AluSz	SINE/Alu	1	311	(1)	3365873
2716	8.7	3.6	0.0	chr6	33132221	33132599	(137673380)	C	MER57B1	LTR/ERV1	(8)	393	1	3365874
4939	14.8	1.2	3.2	chr6	33139166	33139750	(137666229)	C	MER57-int	LTR/ERV1	(6946)	591	1	3365883
2781	12.0	0.5	0.0	chr6	33139751	33140149	(137665830)	C	MER57B1	LTR/ERV1	(0)	401	1	3365883
3306	12.4	4.2	5.1	chr6	34498885	34499418	(136306561)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3368551
1432	16.4	0.9	6.3	chr6	34499419	34499511	(136306468)	+	L1M4	LINE/L1	4969	5058	(1088)	3368550
2296	11.3	0.0	0.7	chr6	34499512	34499820	(136306159)	+	AluSx1	SINE/Alu	1	307	(5)	3368552
12	9.7	5.4	5.1	chr6	36839950	36839986	(133965993)	+	(GGCTCCG)n	Simple_repeat	1	39	(0)	3373406
26	18.9	0.0	0.0	chr6	36840090	36840138	(133965841)	+	(GT)n	Simple_repeat	1	49	(0)	3373407
1213	21.3	12.5	6.5	chr6	40904578	40905035	(129900944)	+	LTR54B	LTR/ERV1	8	496	(2)	3380270
321	26.9	9.2	0.9	chr6	40905058	40905166	(129900813)	C	L2c	LINE/L2	(230)	3157	3039	3380271
533	27.4	7.9	4.0	chr6	40905215	40905533	(129900446)	+	L1ME3F	LINE/L1	5659	5987	(255)	3380272
15	12.7	0.0	5.3	chr6	41073547	41073584	(129732395)	+	(CTCCCCG)n	Simple_repeat	1	38	(0)	3380582
13	15.9	0.0	9.8	chr6	41073761	41073811	(129732168)	+	(CGCC)n	Simple_repeat	1	51	(0)	3380583
228	31.7	15.2	6.3	chr6	41074295	41074597	(129731382)	C	L2c	LINE/L2	(14)	3373	3039	3380584
226	29.8	9.0	7.6	chr6	42928608	42928738	(127877241)	C	L2b	LINE/L2	(20)	3406	3253	3384355
221	28.5	8.7	7.4	chr6	42928783	42928930	(127877049)	C	MIRc	SINE/MIR	(32)	236	87	3384361
15	11.2	7.3	2.3	chr6	43181080	43181120	(127624859)	+	(TCAC)n	Simple_repeat	1	44	(0)	3384871
22	14.9	0.0	0.0	chr6	43769692	43769738	(127036241)	+	(GT)n	Simple_repeat	1	47	(0)	3385987
16	12.7	0.0	5.3	chr6	43770122	43770159	(127035820)	+	G-rich	Low_complexity	1	38	(0)	3385988
351	30.4	7.7	2.3	chr6	46867605	46867776	(123938203)	+	LTR78	LTR/ERV1	771	952	(352)	3390839
1594	21.0	3.7	2.9	chr6	49982659	49983036	(120822943)	+	MER57D	LTR/ERV1	27	407	(4)	3395139
910	24.6	11.9	1.1	chr6	49983045	49983307	(120822672)	+	MER57A-int	LTR/ERV1	3	297	(5890)	3395139
2020	13.9	7.1	4.1	chr6	51358945	51359048	(119446931)	C	MER57D	LTR/ERV1	(25)	386	291	3396971
2151	12.1	1.3	2.6	chr6	51359049	51359355	(119446624)	C	AluSg	SINE/Alu	(7)	303	1	3396972
2139	24.8	6.8	1.6	chr6	53955308	53956114	(116849865)	C	L1ME3D	LINE/L1	(1816)	4330	3479	3400959
242	28.0	6.7	9.9	chr6	53956487	53956688	(116849291)	+	MamRep38	DNA/hAT	87	281	(14)	3400967
1874	10.7	0.0	5.0	chr6	54773399	54773679	(116032300)	C	AluSz	SINE/Alu	(9)	303	37	3402093
25	0.0	0.0	0.0	chr6	56542429	56542455	(114263524)	+	(A)n	Simple_repeat	1	27	(0)	3404286
13	20.1	1.7	8.2	chr6	63572479	63572538	(107233441)	+	(CGGCT)n	Simple_repeat	1	61	(0)	3410802
34	24.6	2.0	1.0	chr6	63572569	63572666	(107233313)	+	(GCC)n	Simple_repeat	1	100	(0)	3410803
2793	10.8	1.6	1.2	chr6	63672654	63673083	(107132896)	+	MER57A1	LTR/ERV1	1	432	(0)	3410977
8784	19.0	5.8	1.6	chr6	69145041	69146719	(101659260)	C	MER52A	LTR/ERV1	(0)	1755	1	3417590
1988	17.2	3.7	0.0	chr6	73896969	73897334	(96908645)	+	MER57D	LTR/ERV1	16	395	(16)	3424377
1529	17.4	1.7	6.2	chr6	73897335	73897638	(96908341)	+	AluJb	SINE/Alu	3	292	(20)	3424378
22	21.6	3.3	5.4	chr6	79077760	79077849	(91728130)	+	(CCGCGG)n	Simple_repeat	1	93	(0)	3430770
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
260	32.2	0.0	0.8	chr6	79504276	79504320	(91301659)	+	L1ME4b	LINE/L1	5710	5754	(370)	3431337
2194	16.7	3.2	0.3	chr6	79504321	79504711	(91301268)	C	MER57B2	LTR/ERV1	(0)	403	1	3431338
948	22.0	13.2	3.3	chr6	82239521	82239854	(88566125)	+	MER57E1	LTR/ERV1	1	372	(0)	3434846
1586	18.4	12.0	0.9	chr6	85372691	85373128	(85432851)	+	LTR54B	LTR/ERV1	4	496	(2)	3438951
285	23.5	1.4	1.4	chr6	85373146	85373214	(85432765)	C	L2a	LINE/L2	(10)	3416	3348	3438952
1009	21.9	6.1	8.5	chr6	85373338	85373372	(85432607)	C	MamRep1151	LTR?	(27)	682	658	3438953
1518	25.4	13.3	4.0	chr6	89840387	89841001	(80964978)	C	LTR41	LTR/ERVL	(78)	690	3	3445482
234	34.4	10.0	5.5	chr6	90066990	90067352	(80738627)	C	L2c	LINE/L2	(97)	3290	2910	3445854
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
1665	18.8	8.3	2.1	chr6	93008254	93008638	(77797341)	+	MER57D	LTR/ERV1	1	411	(0)	3449563
9240	19.5	7.9	3.1	chr6	95635429	95637437	(75168542)	C	MER52D	LTR/ERV1	(0)	2123	10	3452719
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
1260	21.7	4.6	2.7	chr6	96947038	96947402	(73858577)	+	MER57E1	LTR/ERV1	1	372	(0)	3454352
542	30.4	1.6	5.9	chr6	96947403	96947548	(73858431)	C	L4_A_Mam	LINE/RTE-X	(278)	4712	4578	3454351
1994	19.6	4.5	0.2	chr6	98288025	98288292	(72517687)	C	MER57F	LTR/ERV1	(0)	435	150	3456058
49	0.0	0.0	0.0	chr6	98288293	98288334	(72517645)	+	(GT)n	Simple_repeat	1	42	(0)	3456059
1994	19.6	4.5	0.2	chr6	98288335	98288474	(72517505)	C	MER57F	LTR/ERV1	(286)	149	10	3456058
550	31.1	9.2	0.9	chr6	104799099	104799186	(66006793)	C	MIRb	SINE/MIR	(12)	256	159	3464457
1598	17.0	14.3	1.9	chr6	104799187	104799545	(66006434)	+	MER57D	LTR/ERV1	1	411	(0)	3464458
550	31.1	9.2	0.9	chr6	104799546	104799686	(66006293)	C	MIRb	SINE/MIR	(110)	158	6	3464457
23661	6.7	1.7	0.7	chr6	104799761	104805872	(66000107)	+	L1PA6	LINE/L1	5	6154	(0)	3464459
313	21.9	0.0	0.0	chr6	105151528	105151591	(65654388)	C	MER2	DNA/TcMar-Tigger	(281)	64	1	3465031
1773	13.3	12.5	2.4	chr6	105151639	105151968	(65654011)	+	MER57E1	LTR/ERV1	5	372	(0)	3465032
1130	24.5	11.2	5.5	chr6	105175873	105176108	(65629871)	+	HAL1b	LINE/L1	1864	2123	(298)	3465068
1909	17.0	9.9	0.6	chr6	105176150	105176515	(65629464)	C	MER57D	LTR/ERV1	(0)	411	8	3465074
683	33.5	12.0	3.9	chr6	106270695	106271253	(64534726)	+	L2a	LINE/L2	2409	3018	(401)	3466633
2263	12.4	2.0	9.2	chr6	109188862	109189296	(61616683)	+	MER57B2	LTR/ERV1	1	403	(0)	3471801
285	26.0	16.2	3.7	chr6	109189297	109189516	(61616463)	+	L1ME4c	LINE/L1	5842	6109	(15)	3471800
1521	13.2	0.4	6.0	chr6	109861580	109861830	(60944149)	+	AluJb	SINE/Alu	73	309	(3)	3472775
1836	15.7	9.0	1.6	chr6	109861848	109862231	(60943748)	+	LTR54B	LTR/ERV1	127	510	(0)	3472772
233	31.2	5.1	5.1	chr6	112188648	112188745	(58617234)	+	MIR1_Amn	SINE/MIR	45	142	(88)	3476740
2096	15.0	9.0	0.0	chr6	112308281	112308646	(58497333)	+	MER57E2	LTR/ERV1	1	402	(0)	3476935
1469	17.9	3.4	16.2	chr6	112317218	112317555	(58488424)	+	MER57D	LTR/ERV1	1	279	(132)	3476954
28	0.0	0.0	0.0	chr6	112317556	112317582	(58488397)	+	(CAAA)n	Simple_repeat	1	27	(0)	3476955
1469	17.9	3.4	16.2	chr6	112317583	112317717	(58488262)	+	MER57D	LTR/ERV1	280	411	(0)	3476954
2945	16.6	1.2	0.4	chr6	112464794	112465282	(58340697)	C	MER57A-int	LTR/ERV1	(5693)	494	2	3477149
1800	18.6	9.5	2.7	chr6	112465289	112465659	(58340320)	C	MER57B2	LTR/ERV1	(4)	399	1	3477149
13	16.9	4.8	2.3	chr6	116681759	116681800	(54124179)	+	(CCTCCTC)n	Simple_repeat	1	44	(0)	3482936
2114	4.8	0.7	17.6	chr6	116681988	116682344	(54123635)	+	AluY	SINE/Alu	4	299	(12)	3482937
321	21.8	4.7	1.9	chr6	117157923	117158025	(53647954)	+	Kanga11a	DNA/TcMar-Tc2	233	338	(632)	3483541
338	33.9	1.7	0.0	chr6	117158089	117158265	(53647714)	+	L1ME1	LINE/L1	5089	5268	(878)	3483542
1117	24.7	6.2	4.5	chr6	117158281	117158360	(53647619)	+	L1ME1	LINE/L1	5327	5413	(766)	3483542
2148	18.0	1.7	2.9	chr6	117440680	117441091	(53364888)	C	MER57D	LTR/ERV1	(4)	407	1	3483893
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
2391	15.1	2.2	0.5	chr6	123363823	123364216	(47441763)	+	MER57B1	LTR/ERV1	1	401	(0)	3491593
2249	9.2	0.7	4.1	chr6	123364358	123364672	(47441307)	+	AluSc	SINE/Alu	2	305	(4)	3491594
565	26.7	9.4	3.5	chr6	123893813	123894212	(46911767)	C	MamRep4096	DNA/hAT-Tip100	(0)	426	1	3492310
181	17.9	11.1	0.0	chr6	123894299	123894354	(46911625)	C	L3	LINE/CR1	(1814)	2285	2223	3492311
1475	16.6	3.3	0.6	chr6	124607237	124607591	(46198388)	C	MER57D	LTR/ERV1	(0)	411	8	3493213
2118	14.7	3.8	0.8	chr6	125118552	125118935	(45687044)	+	MER57B1	LTR/ERV1	1	396	(5)	3493880
2571	7.7	0.0	0.0	chr6	125118936	125119246	(45686733)	C	AluYm1	SINE/Alu	(0)	311	1	3493881
1358	24.3	9.4	0.0	chr6	125422990	125423326	(45382653)	+	MER57E1	LTR/ERV1	1	372	(0)	3494299
2027	16.0	0.0	0.7	chr6	128410887	128411192	(42394787)	C	AluJb	SINE/Alu	(8)	304	1	3498097
453	33.0	5.2	2.6	chr6	129475583	129475809	(41330170)	C	MamSINE1	SINE/tRNA-RTE	(28)	262	30	3499497
1996	12.4	18.1	0.0	chr6	129865006	129865359	(40940620)	+	MER57C2	LTR/ERV1	1	432	(2)	3500047
2644	8.9	0.0	0.3	chr6	131308030	131308357	(39497622)	+	AluSp	SINE/Alu	2	313	(0)	3502144
1734	29.6	10.3	5.9	chr6	131308358	131308906	(39497073)	+	L1MEf	LINE/L1	63	644	(5756)	3502145
589	18.1	0.2	0.8	chr6	131628642	131628778	(39177201)	C	L1M5	LINE/L1	(2294)	3852	3715	3502624
247	31.6	1.2	2.5	chr6	132365469	132365549	(38440430)	C	Plat_L3	LINE/CR1	(0)	3586	3507	3503743
233	29.0	0.0	1.6	chr6	132365551	132365613	(38440366)	C	MIRc	SINE/MIR	(142)	126	65	3503744
2326	14.9	2.7	0.3	chr6	132524565	132524955	(38281024)	+	MER57B1	LTR/ERV1	1	401	(0)	3503937
15965	20.5	8.8	6.6	chr6	132524956	132529423	(38276556)	+	MER57-int	LTR/ERV1	1	4571	(2966)	3503937
302	30.2	3.4	0.0	chr6	135055112	135055197	(35750782)	+	L2c	LINE/L2	3286	3374	(13)	3507874
1929	13.9	0.7	1.4	chr6	135055222	135055516	(35750463)	+	AluJo	SINE/Alu	1	293	(19)	3507875
365	32.5	4.0	2.4	chr6	138444006	138444128	(32361851)	+	L2b	LINE/L2	3243	3367	(8)	3512956
502	13.0	0.0	0.0	chr6	138444196	138444272	(32361707)	+	MER57B1	LTR/ERV1	297	373	(28)	3512957
198	34.6	14.6	4.7	chr6	139200757	139201215	(31604764)	+	L2	LINE/L2	1120	1635	(1784)	3514279
1529	16.1	14.9	2.8	chr6	139201216	139201650	(31604329)	+	LTR54B	LTR/ERV1	1	497	(1)	3514280
198	34.6	14.6	4.7	chr6	139201651	139201663	(31604316)	+	L2	LINE/L2	1636	1647	(1772)	3514279
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
812	29.0	10.2	1.9	chr6	143409043	143409355	(27396624)	C	LTR41B	LTR/ERVL	(0)	758	417	3519833
756	32.3	3.1	6.4	chr6	143409377	143409674	(27396305)	C	LTR41B	LTR/ERVL	(293)	465	178	3519833
2522	6.7	1.3	1.3	chr6	143409675	143409973	(27396006)	+	AluY	SINE/Alu	1	299	(12)	3519834
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
11	14.1	0.0	8.1	chr6	144007925	144007961	(26798018)	+	(GGACCC)n	Simple_repeat	1	37	(0)	3520695
2075	12.8	5.3	9.1	chr6	144084486	144084838	(26721141)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3520827
449	33.3	0.7	2.0	chr6	144266496	144266642	(26539337)	C	MIR3	SINE/MIR	(6)	202	58	3521135
1373	19.6	5.4	5.1	chr6	145235104	145235474	(25570505)	+	MER57E1	LTR/ERV1	1	372	(0)	3522473
51	0.0	0.0	0.0	chr6	145235590	145235633	(25570346)	+	(AT)n	Simple_repeat	1	44	(0)	3522474
20	17.8	0.0	2.4	chr6	145235634	145235679	(25570300)	+	(TG)n	Simple_repeat	1	44	(0)	3522475
2269	15.2	3.2	0.5	chr6	145564323	145564719	(25241260)	C	MER57D	LTR/ERV1	(2)	409	2	3522933
15	13.2	2.9	2.8	chr6	147508440	147508474	(23297505)	+	(GCG)n	Simple_repeat	1	36	(0)	3525501
12	24.0	2.6	0.0	chr6	147508629	147508667	(23297312)	+	(GCG)n	Simple_repeat	1	40	(0)	3525502
1566	25.2	7.5	8.4	chr6	147998830	147999113	(22806866)	+	L1MC4a	LINE/L1	6558	6808	(1074)	3526195
2145	15.3	0.2	6.8	chr6	147999149	147999502	(22806477)	C	MER57D	LTR/ERV1	(4)	407	80	3526197
2291	9.0	0.4	0.0	chr6	147999503	147999807	(22806172)	C	AluSg	SINE/Alu	(0)	310	1	3526198
820	27.6	9.7	5.3	chr6	148597067	148597189	(22208790)	C	LTR38B	LTR/ERV1	(0)	610	487	3527173
3278	10.0	0.2	0.0	chr6	148597190	148597620	(22208359)	C	MER57A1	LTR/ERV1	(0)	432	1	3527174
3823	26.8	7.9	2.6	chr6	149141605	149143050	(21662929)	+	L1MEd	LINE/L1	3032	4580	(1566)	3527964
1983	14.7	10.5	1.3	chr6	149143051	149143423	(21662556)	C	MER57D	LTR/ERV1	(0)	411	1	3527965
3823	26.8	7.9	2.6	chr6	149143424	149143879	(21662100)	+	L1MEd	LINE/L1	4581	5043	(1103)	3527964
2098	8.4	0.0	0.3	chr6	149941241	149941559	(20864420)	+	AluSq	SINE/Alu	1	313	(0)	3529419
876	15.8	0.0	0.0	chr6	153384699	153384825	(17421154)	+	AluJb	SINE/Alu	179	305	(7)	3534850
48	9.2	2.4	2.3	chr6	153384826	153384912	(17421067)	+	(GAAAA)n	Simple_repeat	1	87	(0)	3534851
1102	14.8	0.0	1.6	chr6	153384941	153385126	(17420853)	+	MLT1B	LTR/ERVL-MaLR	192	374	(16)	3534852
19	8.3	0.0	0.0	chr6	154510937	154510962	(16295017)	+	(A)n	Simple_repeat	1	26	(0)	3536517
2261	10.6	0.0	0.0	chr6	154553626	154553918	(16252061)	+	AluSx1	SINE/Alu	1	293	(19)	3536609
1437	22.8	1.3	7.3	chr6	154553919	154554274	(16251705)	+	MLT1A	LTR/ERVL-MaLR	36	373	(1)	3536608
325	33.2	6.6	3.6	chr6	154554275	154554475	(16251504)	C	MIRb	SINE/MIR	(37)	231	17	3536607
876	26.6	17.4	1.1	chr6	157105900	157106191	(13699788)	+	L1MC5a	LINE/L1	193	556	(2221)	3540426
763	23.7	7.3	3.8	chr6	157106245	157106533	(13699446)	C	MLT1E1	LTR/ERVL-MaLR	(33)	621	322	3540429
641	17.0	3.6	4.9	chr6	157106550	157106691	(13699288)	C	MLT1E1	LTR/ERVL-MaLR	(419)	234	95	3540429
687	27.6	2.0	2.0	chr6	157376459	157376680	(13429299)	+	MIRb	SINE/MIR	12	230	(32)	3540811
2651	14.1	0.7	0.0	chr6	157376862	157377259	(13428720)	C	MER57B1	LTR/ERV1	(0)	401	1	3540812
15	15.5	0.0	9.6	chr6	158818193	158818244	(11987735)	+	(CGCC)n	Simple_repeat	1	52	(0)	3543164
17	7.3	0.0	3.2	chr6	158818324	158818354	(11987625)	+	(GGGCC)n	Simple_repeat	1	31	(0)	3543165
2200	16.3	5.9	0.5	chr6	159398578	159398947	(11407032)	+	MER57B1	LTR/ERV1	1	391	(10)	3544020
14	5.2	8.9	6.1	chr6	159692948	159692992	(11112987)	+	(GCGTCCCC)n	Simple_repeat	1	49	(0)	3544445
16	27.2	1.9	0.0	chr6	159693167	159693219	(11112760)	+	(TGC)n	Simple_repeat	1	54	(0)	3544446
26	9.9	5.4	1.7	chr6	159693321	159693376	(11112603)	+	(CCGCC)n	Simple_repeat	1	59	(0)	3544447
2697	10.7	2.0	3.0	chr6	160804636	160804942	(10001037)	C	MER57B1	LTR/ERV1	(0)	401	96	3545821
12	22.1	0.0	0.0	chr6	161748944	161748975	(9057004)	+	A-rich	Low_complexity	1	32	(0)	3547162
2391	12.9	6.5	0.8	chr6	168359325	168359700	(2446279)	+	MER57B1	LTR/ERV1	3	401	(0)	3555417
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
2466	6.7	0.0	0.3	chr7	1190779	1191078	(158154895)	+	AluY	SINE/Alu	1	299	(12)	3559463
3358	13.6	1.3	3.0	chr7	1191328	1191438	(158154535)	+	MER1A	DNA/hAT-Charlie	1	111	(418)	3559464
2200	12.5	0.0	0.0	chr7	1191439	1191735	(158154238)	C	AluSp	SINE/Alu	(16)	297	1	3559465
227	18.8	0.0	0.0	chr7	2758183	2758230	(156587743)	C	Charlie1b	DNA/hAT-Charlie	(92)	431	384	3561945
292	19.2	1.9	0.0	chr7	2758244	2758295	(156587678)	+	Alu	SINE/Alu	1	53	(80)	3561946
479	32.5	0.7	0.0	chr7	2758278	2758428	(156587545)	C	Charlie1	DNA/hAT-Charlie	(2547)	234	83	3561947
345	21.2	1.7	0.9	chr7	2758469	2758621	(156587352)	+	MLT1E1	LTR/ERVL-MaLR	52	255	(399)	3561948
366	32.0	6.9	6.5	chr7	2758697	2758863	(156587110)	+	L1ME3A	LINE/L1	5686	5849	(324)	3561949
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
234	32.5	4.0	0.0	chr7	4187309	4187428	(155158545)	C	L1ME4c	LINE/L1	(355)	475	351	3564367
806	24.7	4.0	0.5	chr7	4187638	4187857	(155158116)	C	MER57F	LTR/ERV1	(0)	435	208	3564368
1894	14.2	11.3	0.6	chr7	4187858	4188182	(155157791)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3564369
181	32.3	0.0	1.5	chr7	5562540	5562605	(153783368)	C	L2a	LINE/L2	(346)	3080	3016	3567345
13	4.1	0.0	9.7	chr7	8261747	8261777	(151084196)	+	(GGTG)n	Simple_repeat	1	31	(0)	3572278
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
1400	15.4	2.7	9.5	chr7	10495564	10495878	(148850095)	+	L1P4	LINE/L1	4651	4943	(1203)	3575004
5186	25.2	5.3	7.0	chr7	10495857	10496206	(148849767)	+	L1PA10	LINE/L1	10	368	(6093)	3575005
2124	14.2	1.0	0.0	chr7	10496207	10496509	(148849464)	C	AluSx1	SINE/Alu	(6)	306	1	3575006
14684	17.2	2.4	2.1	chr7	15148327	15152235	(144193738)	C	L1PA15	LINE/L1	(5)	6780	2920	3580897
470	23.6	1.9	1.9	chr7	15152240	15152347	(144193626)	C	MER57E1	LTR/ERV1	(24)	348	241	3580898
5895	11.1	1.6	1.3	chr7	15152356	15153976	(144191997)	C	L1PB1	LINE/L1	(1)	6150	4521	3580899
2682	19.6	0.8	2.7	chr7	15227462	15227974	(144117999)	+	LTR45C	LTR/ERV1	35	537	(2)	3580986
791	14.9	0.7	0.0	chr7	15227976	15228109	(144117864)	+	MER57C1	LTR/ERV1	251	385	(0)	3580987
278	27.9	8.8	5.7	chr7	17385493	17385667	(141960306)	C	L1ME4c	LINE/L1	(448)	382	202	3583827
1651	17.7	7.5	1.7	chr7	17385696	17386057	(141959916)	C	MER57B1	LTR/ERV1	(9)	392	8	3583828
17	22.8	3.1	3.0	chr7	35254198	35254262	(124091711)	+	G-rich	Low_complexity	1	67	(0)	3610384
6026	24.1	5.0	4.6	chr7	35592397	35594015	(123751958)	+	ERVL-E-int	LTR/ERVL	2133	3758	(1909)	3610918
7694	20.2	4.1	2.4	chr7	38171606	38173162	(121172811)	C	L1MB5	LINE/L1	(1)	6671	5071	3614733
1623	18.4	11.2	0.5	chr7	38173163	38173529	(121172444)	C	MER57D	LTR/ERV1	(0)	411	1	3614734
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2300	5.4	2.5	0.0	chr7	64306939	64307216	(95038757)	C	AluSc8	SINE/Alu	(17)	294	10	3646129
35	0.0	0.0	0.0	chr7	64307217	64307249	(95038724)	+	(CGCCCTGC)n	Simple_repeat	1	33	(0)	3646130
14	20.4	1.7	6.8	chr7	64307702	64307759	(95038214)	+	(CCCT)n	Simple_repeat	1	59	(0)	3646131
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
2383	7.7	0.3	0.0	chr7	67303089	67303387	(92042586)	+	AluSx1	SINE/Alu	1	300	(12)	3651929
318	22.3	3.4	9.0	chr7	70495526	70497356	(88848617)	+	(CGCACA)n	Simple_repeat	1	1893	(0)	3658384
754	27.7	6.6	7.3	chr7	82050233	82050645	(77295328)	C	LTR40A1	LTR/ERVL	(2)	582	173	3680334
22	13.8	0.0	0.0	chr7	82443816	82443855	(76902118)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	3680896
308	36.8	6.8	0.0	chr7	86509534	86509737	(72836236)	C	L2a	LINE/L2	(176)	3250	3032	3686049
2265	14.2	0.5	10.1	chr7	86621815	86622252	(72723721)	+	MER57A1	LTR/ERV1	27	422	(10)	3686151
14	16.6	2.3	4.4	chr7	87059455	87059498	(72286475)	+	(GCCCCC)n	Simple_repeat	1	45	(0)	3686719
29	14.5	3.5	5.7	chr7	87059714	87059833	(72286140)	+	G-rich	Low_complexity	1	117	(0)	3686720
601	23.5	7.0	0.0	chr7	87060138	87060269	(72285704)	+	MIR	SINE/MIR	114	255	(7)	3686721
2783	18.3	9.4	9.7	chr7	87354026	87355103	(71990870)	C	MER4-int	LTR/ERV1	(2582)	4016	3087	3687083
2003	16.6	0.0	0.0	chr7	87355104	87355399	(71990574)	C	AluJb	SINE/Alu	(16)	296	1	3687084
48	0.0	0.0	0.0	chr7	87628585	87628625	(71717348)	+	(GT)n	Simple_repeat	1	41	(0)	3687477
14	9.3	0.0	0.0	chr7	87628861	87628883	(71717090)	+	(GCG)n	Simple_repeat	1	23	(0)	3687478
5124	15.7	2.6	1.0	chr7	87731264	87732399	(71613574)	+	L1MB8	LINE/L1	3389	4553	(3012)	3687604
960	9.2	0.8	0.0	chr7	87732400	87732530	(71613443)	C	HERVK11D-int	LTR/ERVK	(7620)	132	1	3687605
7524	3.9	0.9	0.1	chr7	87732531	87733420	(71612553)	C	MER11D	LTR/ERVK	(0)	897	1	3687605
18	0.0	0.0	0.0	chr7	87934661	87934680	(71411293)	+	(T)n	Simple_repeat	1	20	(0)	3687846
240	27.9	1.2	2.5	chr7	99078361	99078441	(60267532)	+	HAL1ME	LINE/L1	8	87	(2378)	3703917
3516	11.1	4.3	1.0	chr7	99078488	99078998	(60266975)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3703918
17	10.8	4.5	4.3	chr7	99143814	99143857	(60202116)	+	(CGCCC)n	Simple_repeat	1	46	(0)	3704035
49	19.1	3.5	5.6	chr7	99144016	99144187	(60201786)	+	(GCCGCC)n	Simple_repeat	1	178	(0)	3704036
2047	14.1	5.5	8.1	chr7	99920202	99920610	(59425363)	C	MER57D	LTR/ERV1	(6)	405	8	3705499
13	24.9	0.0	0.0	chr7	100803933	100803970	(58542003)	+	GA-rich	Low_complexity	1	38	(0)	3707412
29	10.0	5.7	4.0	chr7	105876591	105876663	(53469310)	+	G-rich	Low_complexity	1	74	(0)	3716733
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
3349	13.0	0.8	0.0	chr7	110081831	110082316	(49263657)	C	MER1A	DNA/hAT-Charlie	(0)	529	40	3722579
4130	19.2	2.4	5.4	chr7	110082325	110083171	(49262802)	+	ERVL-B4-int	LTR/ERVL	20	840	(4874)	3722580
3531	12.5	1.7	0.4	chr7	110889128	110889649	(48456324)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3723596
334	35.5	7.1	1.2	chr7	110889650	110889663	(48456310)	+	MIRc	SINE/MIR	171	183	(85)	3723595
382	27.7	3.2	18.2	chr7	110889706	110889996	(48455977)	+	MIR	SINE/MIR	17	262	(0)	3723597
14	22.7	4.5	4.3	chr7	116672312	116672378	(42673595)	+	(GGCG)n	Simple_repeat	1	70	(0)	3731400
16	22.5	4.7	5.6	chr7	116672439	116672524	(42673449)	+	(GAGCG)n	Simple_repeat	1	90	(0)	3731401
1969	14.9	2.1	3.2	chr7	117882505	117882843	(41463130)	C	MER1B	DNA/hAT-Charlie	(3)	336	2	3733144
2060	12.4	0.3	2.9	chr7	117883082	117883388	(41462585)	+	AluSx1	SINE/Alu	6	304	(8)	3733145
952	28.8	6.2	3.3	chr7	118238844	118239104	(41106869)	+	MLT1C	LTR/ERVL-MaLR	2	273	(194)	3733638
1786	18.1	0.6	1.2	chr7	118239105	118239444	(41106529)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	3733639
571	32.4	2.4	2.4	chr7	120733891	120733961	(38612012)	C	MIR	SINE/MIR	(3)	259	188	3736757
2690	13.5	0.5	0.0	chr7	120733962	120734360	(38611613)	C	MER57B1	LTR/ERV1	(0)	401	1	3736758
29	7.9	0.0	0.0	chr7	124775394	124775434	(34570539)	+	(TGTG)n	Simple_repeat	1	41	(0)	3742281
1513	26.8	11.8	3.0	chr7	124775542	124776206	(34569767)	+	Tigger13a	DNA/TcMar-Tigger	30	760	(11)	3742282
2127	10.8	1.1	0.0	chr7	130239940	130240218	(29105755)	C	AluSx	SINE/Alu	(30)	282	1	3750838
1947	15.5	12.9	2.3	chr7	130240369	130240810	(29105163)	C	LTR54B	LTR/ERV1	(2)	496	1	3750839
1983	13.7	5.0	3.3	chr7	133916037	133916369	(25429604)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3756671
684	21.5	1.6	0.0	chr7	133916448	133916568	(25429405)	C	AluJr	SINE/Alu	(189)	123	1	3756672
12375	13.9	3.9	1.9	chr7	134087194	134090582	(25255391)	C	MER41-int	LTR/ERV1	(462)	6726	3229	3756931
3498	8.6	7.9	0.4	chr7	134432178	134432666	(24913307)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3757479
613	25.4	2.6	5.6	chr7	134432667	134432705	(24913268)	+	MIRb	SINE/MIR	182	216	(52)	3757478
1154	20.8	1.1	5.7	chr7	134482552	134482779	(24863194)	C	MLT1A	LTR/ERVL-MaLR	(66)	308	88	3757550
1674	20.8	2.7	4.3	chr7	134482780	134483155	(24862818)	+	MER57E1	LTR/ERV1	3	372	(0)	3757551
1154	20.8	1.1	5.7	chr7	134483156	134483206	(24862767)	C	MLT1A	LTR/ERVL-MaLR	(287)	87	42	3757550
1927	21.9	4.3	1.5	chr7	135661509	135661981	(23683992)	+	LTR31	LTR/ERV1	115	601	(18)	3759373
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
1474	27.1	7.3	6.8	chr7	138247921	138248476	(21097497)	C	LTR26	LTR/ERV1	(0)	603	1	3763218
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
1401	16.4	28.4	0.0	chr7	141513838	141514157	(17831816)	C	MER57D	LTR/ERV1	(0)	411	1	3769410
1051	30.1	7.5	0.7	chr7	141514182	141514602	(17831371)	+	L2a	LINE/L2	2480	2931	(488)	3769411
1540	14.3	1.3	0.0	chr7	141737809	141738038	(17607935)	C	AluJb	SINE/Alu	(2)	310	78	3769757
420	30.6	0.0	4.0	chr7	141738729	141738854	(17607119)	C	L2a	LINE/L2	(16)	3410	3290	3769758
332	24.7	2.4	0.0	chr7	142954817	142954897	(16391076)	+	MER96B	DNA/hAT-Tip100	1	83	(334)	3771207
1664	15.7	2.1	0.4	chr7	142954890	142955170	(16390803)	+	MER57C1	LTR/ERV1	64	349	(36)	3771208
347	13.3	10.0	0.0	chr7	142955177	142955266	(16390707)	C	MER96B	DNA/hAT	(65)	352	253	3771209
3494	15.9	4.2	6.9	chr7	143262710	143263273	(16082700)	C	LTR8A	LTR/ERV1	(153)	574	1	3771648
496	30.4	8.9	11.0	chr7	145645601	145646227	(13699746)	C	HAL1ME	LINE/L1	(819)	1646	965	3774895
1470	20.1	12.4	0.3	chr7	145646228	145646552	(13699421)	C	MER57E1	LTR/ERV1	(0)	372	3	3774896
325	30.1	9.0	11.7	chr7	145646553	145646627	(13699346)	C	HAL1ME	LINE/L1	(1543)	964	901	3774895
2372	26.3	3.2	0.9	chr7	145831628	145832257	(13513716)	C	MLT2F	LTR/ERVL	(14)	649	5	3775143
33	11.4	1.3	6.5	chr7	146116098	146116173	(13229800)	+	GA-rich	Low_complexity	1	77	(0)	3775457
26	0.0	0.0	0.0	chr7	146116215	146116239	(13229734)	+	(GGC)n	Simple_repeat	1	25	(0)	3775458
2325	12.5	0.0	0.3	chr7	148522725	148523027	(10822946)	+	AluJo	SINE/Alu	1	302	(10)	3778934
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
9178	19.6	3.0	0.9	chr7	149527865	149529552	(9816421)	+	LTR25-int	LTR/ERV1	36	1760	(5428)	3780816
7735	18.1	3.7	2.0	chr7	149529583	149531015	(9814958)	+	LTR25-int	LTR/ERV1	2282	4634	(1484)	3780816
3001	13.2	0.0	0.0	chr7	152899495	152899926	(6446047)	+	MER57A1	LTR/ERV1	1	432	(0)	3786166
2134	15.3	5.3	6.6	chr7	154483360	154483682	(4862291)	C	MER57F	LTR/ERV1	(0)	435	121	3788330
51	38.1	0.0	0.0	chr7	155534282	155534464	(3811509)	+	(CA)n	Simple_repeat	1	183	(0)	3789753
262	31.4	8.9	1.3	chr7	156650296	156650450	(2695523)	C	MLT1L	LTR/ERVL-MaLR	(349)	261	94	3791178
18	15.6	2.1	4.2	chr7	156908881	156908928	(2437045)	+	(AAC)n	Simple_repeat	1	47	(0)	3791541
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
2235	18.8	6.0	1.2	chr8	582711	583219	(144555417)	+	L1M4	LINE/L1	4855	5385	(795)	3794972
3215	10.0	0.2	0.0	chr8	583220	583648	(144554988)	C	MER57A1	LTR/ERV1	(0)	432	3	3794975
2947	11.9	1.1	0.7	chr8	653239	653668	(144484968)	+	MER57A1	LTR/ERV1	1	432	(0)	3795046
2508	23.2	4.1	2.2	chr8	653669	653860	(144484776)	+	L1MB3	LINE/L1	5792	5980	(203)	3795045
818	23.4	3.1	1.8	chr8	653870	654091	(144484545)	+	L1MB3	LINE/L1	5821	6045	(138)	3795047
3989	23.9	4.8	1.1	chr8	1542241	1543899	(143594737)	C	L1MB7	LINE/L1	(13)	6171	4438	3795842
23	21.6	5.2	1.2	chr8	10730111	10730187	(134408449)	+	(CCGC)n	Simple_repeat	1	81	(0)	3808551
2301	16.0	5.0	0.7	chr8	15582576	15583016	(129555620)	+	MER65C	LTR/ERV1	1	461	(0)	3815608
2422	17.4	15.0	5.7	chr8	16284031	16284656	(128853980)	+	MER4CL34	LTR/ERV1	1	708	(57)	3816561
2577	15.7	0.5	0.9	chr8	16284657	16285088	(128853548)	C	MER57A1	LTR/ERV1	(2)	430	1	3816562
12	16.3	2.8	2.7	chr8	19013517	19013552	(126125084)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	3820499
31	25.6	0.0	8.8	chr8	19013798	19013956	(126124680)	+	G-rich	Low_complexity	1	159	(0)	3820500
4184	18.1	6.2	4.3	chr8	19065203	19066047	(126072589)	C	MER21B	LTR/ERVL	(6)	862	1	3820589
515	12.8	5.5	0.4	chr8	19066048	19066170	(126072466)	+	LTR54B	LTR/ERV1	374	499	(11)	3820588
2341	15.6	9.7	0.0	chr8	19734223	19734614	(125404022)	+	MER57C2	LTR/ERV1	1	434	(0)	3821684
257	24.3	6.3	2.6	chr8	19734719	19734794	(125403842)	+	L1MEd	LINE/L1	1	79	(7007)	3821685
626	24.3	3.1	5.0	chr8	25019739	25019937	(120118699)	C	MER34A	LTR/ERV1	(1)	541	347	3830344
1504	19.9	10.0	1.4	chr8	25019913	25020258	(120118378)	C	MER57D	LTR/ERV1	(7)	404	26	3830345
2223	13.9	0.3	4.5	chr8	30116311	30116664	(115021972)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3839075
1554	20.6	3.1	5.3	chr8	30116679	30117072	(115021564)	+	MER21C	LTR/ERVL	548	932	(6)	3839073
3122	10.9	0.0	0.2	chr8	31362688	31363119	(113775517)	C	MER57A1	LTR/ERV1	(1)	431	1	3841459
978	6.5	0.8	0.0	chr8	33512782	33512904	(111625732)	+	AluYc3	SINE/Alu	177	300	(0)	3844635
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
330	27.4	0.0	5.0	chr8	39181536	39181610	(105957026)	C	HAL1ME	LINE/L1	(790)	1675	1604	3853601
870	25.1	10.9	3.4	chr8	39181624	39181977	(105956659)	C	L2	LINE/L2	(2202)	1217	834	3853608
516	26.0	11.5	2.4	chr8	39182011	39182223	(105956413)	+	L1M5	LINE/L1	4677	4911	(1235)	3853609
755	24.4	5.8	8.4	chr8	39791087	39791372	(105347264)	+	LTR54B	LTR/ERV1	79	356	(142)	3854343
335	33.5	8.3	4.0	chr8	39791514	39791765	(105346871)	+	LTR49-int	LTR/ERV1	1951	2214	(4117)	3854344
406	19.4	7.2	0.0	chr8	39791769	39791871	(105346765)	+	MER57A-int	LTR/ERV1	374	484	(5703)	3854345
449	27.2	7.2	2.0	chr8	42139662	42139860	(102998776)	C	L1ME4b	LINE/L1	(236)	656	447	3858210
12211	16.9	6.5	4.7	chr8	43109840	43110635	(102028001)	C	MER41-int	LTR/ERV1	(2286)	3660	3013	3860135
2035	9.8	1.7	2.4	chr8	43110636	43110931	(102027705)	+	AluSq2	SINE/Alu	1	294	(19)	3860136
2203	13.7	0.3	0.0	chr8	47564965	47565270	(97573366)	+	AluSp	SINE/Alu	1	307	(6)	3862072
467	28.3	10.7	2.1	chr8	55772631	55772818	(89365818)	C	MIRb	SINE/MIR	(61)	207	2	3872867
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
19	24.0	0.0	0.0	chr8	57995111	57995160	(87143476)	+	(GGCCGG)n	Simple_repeat	1	50	(0)	3876031
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
1051	27.6	10.7	3.9	chr8	61706533	61707788	(83430848)	+	L1ME3E	LINE/L1	4516	5873	(369)	3880991
18	34.5	0.0	1.4	chr8	61707840	61707908	(83430728)	+	(TA)n	Simple_repeat	1	69	(0)	3880992
2203	9.6	2.0	0.3	chr8	61810247	61810538	(83328098)	+	AluSq2	SINE/Alu	1	297	(16)	3881154
1891	16.3	4.6	1.3	chr8	62081242	62081602	(83057034)	+	MER57C2	LTR/ERV1	1	416	(18)	3881471
1491	6.3	0.0	0.0	chr8	62081603	62081791	(83056845)	+	L1PA5	LINE/L1	5957	6145	(9)	3881472
1379	27.8	9.5	0.6	chr8	65375695	65376211	(79762425)	+	LTR16E2	LTR/ERVL	1	568	(0)	3885688
532	30.9	3.7	2.2	chr8	65829548	65829748	(79308888)	+	MIR3	SINE/MIR	1	202	(6)	3886477
11	15.8	6.5	4.1	chr8	65830044	65830089	(79308547)	+	(ACTTCC)n	Simple_repeat	1	49	(0)	3886478
229	11.9	0.0	0.0	chr8	67027983	67028024	(78110612)	C	L1PA17	LINE/L1	(21)	6145	6104	3888570
254	35.5	6.8	3.1	chr8	67028312	67028439	(78110197)	+	MER5A	DNA/hAT-Charlie	54	186	(3)	3888571
11	18.2	2.4	4.8	chr8	73294579	73294619	(71844017)	+	(AGCGCGG)n	Simple_repeat	1	42	(0)	3897759
16	19.8	1.7	6.6	chr8	73294989	73295048	(71843588)	+	(GCCG)n	Simple_repeat	1	61	(0)	3897760
3289	22.4	8.0	2.9	chr8	73536088	73537891	(71600745)	+	L1MDa	LINE/L1	18	2209	(4424)	3898109
2277	15.1	5.2	1.2	chr8	84347813	84348222	(60790414)	C	MER57C2	LTR/ERV1	(0)	434	8	3913045
19176	10.0	0.2	0.5	chr8	85737907	85741568	(59397068)	+	L1PA5	LINE/L1	2507	6152	(2)	3914958
823	27.5	3.4	3.1	chr8	89825016	89825364	(55313272)	+	L1MA9	LINE/L1	5933	6282	(30)	3920324
403	29.1	3.1	6.0	chr8	89825853	89826020	(55312616)	C	MIRc	SINE/MIR	(62)	206	44	3920325
2118	14.3	0.0	0.0	chr8	89985360	89985660	(55152976)	+	AluJr	SINE/Alu	1	301	(11)	3920579
16	10.5	3.2	0.0	chr8	92103158	92103188	(53035448)	+	(CTCC)n	Simple_repeat	1	32	(0)	3923413
17	21.4	3.9	5.0	chr8	92103352	92103428	(53035208)	+	(GCGCCGC)n	Simple_repeat	1	80	(0)	3923414
12	9.8	0.0	0.0	chr8	92103580	92103601	(53035035)	+	(GGGC)n	Simple_repeat	1	22	(0)	3923415
390	31.1	12.3	2.2	chr8	94092547	94092773	(51045863)	+	MamGypsy2-I	LTR/Gypsy	3696	3948	(218)	3926300
1895	17.0	2.1	3.7	chr8	94092811	94093188	(51045448)	C	MER57E1	LTR/ERV1	(0)	372	1	3926311
2597	7.7	0.3	1.0	chr8	94330650	94330960	(50807676)	C	AluSx	SINE/Alu	(0)	312	4	3926647
1803	22.8	2.5	3.7	chr8	94330961	94331112	(50807524)	+	MER57A1	LTR/ERV1	282	432	(0)	3926646
29	3.2	0.0	0.0	chr8	94331258	94331289	(50807347)	+	(AGGAG)n	Simple_repeat	1	32	(0)	3926648
2445	8.7	0.0	0.0	chr8	94420703	94421000	(50717636)	+	AluSx1	SINE/Alu	1	298	(14)	3926789
1160	33.1	9.0	2.6	chr8	94421075	94421955	(50716681)	+	L2	LINE/L2	1905	2847	(572)	3926790
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
2237	13.7	10.8	1.3	chr8	95177824	95178209	(49960427)	+	MER57C2	LTR/ERV1	8	434	(0)	3928342
2758	18.4	9.5	8.6	chr8	95178210	95178573	(49960063)	+	MER45B	DNA/hAT-Tip100	313	700	(340)	3928343
829	22.7	9.3	1.3	chr8	95222007	95222418	(49916218)	+	LTR54B	LTR/ERV1	2	491	(19)	3928431
829	24.3	14.4	4.7	chr8	95222438	95222843	(49915793)	C	L2a	LINE/L2	(358)	3061	2610	3928429
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
16	10.0	0.0	0.0	chr8	104329850	104329871	(40808765)	+	(A)n	Simple_repeat	1	22	(0)	3943523
637	21.2	0.0	11.0	chr8	104776531	104776694	(40361942)	C	AluJb	SINE/Alu	(30)	282	137	3944243
369	25.0	1.6	0.8	chr8	104776698	104776818	(40361818)	C	MER113A	DNA/hAT-Charlie	(67)	247	126	3944244
1674	26.8	4.5	4.3	chr8	104776822	104777426	(40361210)	+	Kanga1d	DNA/TcMar-Tc2	1	606	(3)	3944245
379	30.5	5.7	0.0	chr8	117616491	117616657	(27521979)	+	MLT1L	LTR/ERVL-MaLR	282	458	(152)	3961879
11	24.5	4.9	3.1	chr8	119856107	119856167	(25282469)	+	(GATCCCC)n	Simple_repeat	1	64	(0)	3965498
235	22.1	11.3	4.4	chr8	119874443	119874532	(25264104)	+	MIRb	SINE/MIR	101	197	(71)	3965548
1697	18.1	3.5	4.3	chr8	121144473	121144690	(23993946)	C	MER57E1	LTR/ERV1	(0)	372	153	3967758
3498	6.1	1.6	0.2	chr8	121144691	121145135	(23993501)	C	MLT2A2	LTR/ERVL	(0)	453	3	3967759
202	31.6	10.1	3.6	chr8	123042621	123042814	(22095822)	C	L2a	LINE/L2	(40)	3386	3179	3971028
2464	8.6	0.0	1.0	chr8	124338909	124339221	(20799415)	+	AluSg4	SINE/Alu	1	310	(0)	3973526
2155	15.1	0.5	9.2	chr8	124339222	124339542	(20799094)	+	MER57C1	LTR/ERV1	101	385	(0)	3973525
15	3.9	0.0	6.7	chr8	124339697	124339726	(20798910)	+	(GATTG)n	Simple_repeat	1	30	(0)	3973527
2184	14.2	1.3	4.8	chr8	124345030	124345428	(20793208)	+	MER57C1	LTR/ERV1	1	385	(0)	3973529
23	15.1	1.5	7.2	chr8	124372428	124372495	(20766141)	+	G-rich	Low_complexity	1	69	(0)	3973578
19	15.8	1.8	5.4	chr8	124372641	124372695	(20765941)	+	(GCAGCC)n	Simple_repeat	1	56	(0)	3973579
234	30.6	9.2	0.9	chr8	127627028	127627136	(17511500)	C	L2b	LINE/L2	(4)	3371	3253	3979703
233	30.1	0.0	1.4	chr8	127627146	127627219	(17511417)	+	L2a	LINE/L2	3354	3426	(0)	3979704
1813	14.6	14.5	3.4	chr8	130731551	130731894	(14406742)	+	MER57C2	LTR/ERV1	1	396	(38)	3985662
49	0.0	3.9	0.0	chr8	130731895	130731946	(14406690)	+	(TTTTC)n	Simple_repeat	1	54	(0)	3985663
312	23.9	15.7	4.5	chr8	131174401	131174523	(13964113)	C	MIR	SINE/MIR	(0)	262	110	3986436
2371	16.8	0.8	0.5	chr8	131174524	131174923	(13963713)	C	MER57B2	LTR/ERV1	(2)	401	1	3986437
257	34.3	5.8	9.2	chr8	131175003	131175307	(13963329)	+	L2c	LINE/L2	3046	3339	(48)	3986438
1566	17.8	6.2	0.7	chr8	135509975	135510261	(9628375)	C	AluJb	SINE/Alu	(7)	305	2	3994133
1211	19.8	5.6	9.9	chr8	135510262	135510445	(9628191)	C	MER57E1	LTR/ERV1	(16)	356	164	3994134
2266	10.4	0.3	0.0	chr8	135510446	135510732	(9627904)	C	AluSc8	SINE/Alu	(23)	288	1	3994135
262	34.1	6.7	2.3	chr8	140231010	140231138	(4907498)	+	L2b	LINE/L2	3241	3375	(0)	4001579
2412	14.8	3.5	0.0	chr8	142333981	142334366	(2804270)	+	MER57B1	LTR/ERV1	2	401	(0)	4004784
223	19.2	3.6	0.0	chr8	142334429	142334486	(2804150)	C	MIRb	SINE/MIR	(145)	117	65	4004785
873	29.9	9.1	1.6	chr8	142334523	142335103	(2803533)	+	L1MEf	LINE/L1	1351	1979	(4436)	4004786
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
303	23.3	8.8	6.4	chr9	706467	706622	(137688095)	+	L1ME4a	LINE/L1	5962	6121	(3)	4009607
12	4.5	4.0	3.9	chr9	2621364	2621388	(135773329)	+	(CTG)n	Simple_repeat	1	26	(0)	4012375
12	23.4	4.6	4.4	chr9	2621834	2621898	(135772819)	+	(CTCTCCG)n	Simple_repeat	1	68	(0)	4012376
25	24.1	4.8	0.0	chr9	2621899	2621913	(135772804)	+	(CTCCT)n	Simple_repeat	4	87	(0)	4012377
921	16.8	3.0	3.5	chr9	4657334	4657531	(133737186)	+	MLT1C	LTR/ERVL-MaLR	1	197	(270)	4015431
664	22.9	5.9	3.3	chr9	4657562	4657949	(133736768)	C	MER57D	LTR/ERV1	(6)	405	18	4015432
455	30.3	9.6	3.6	chr9	4678341	4678740	(133715977)	C	L1ME4b	LINE/L1	(176)	716	288	4015461
323	29.6	16.5	5.3	chr9	4678876	4679047	(133715670)	+	MIR	SINE/MIR	17	216	(52)	4015463
1949	18.9	3.6	3.2	chr9	12151953	12152501	(126242216)	+	MLT2A2	LTR/ERVL	1	554	(0)	4025882
13	9.8	0.0	0.0	chr9	14313779	14313800	(124080917)	+	(GCC)n	Simple_repeat	1	22	(0)	4028782
13	14.1	3.0	2.9	chr9	14313833	14313865	(124080852)	+	(TTG)n	Simple_repeat	1	34	(0)	4028783
23	16.3	0.0	6.5	chr9	14313943	14314004	(124080713)	+	(GGCG)n	Simple_repeat	1	62	(0)	4028784
20	12.6	2.1	4.2	chr9	14314318	14314364	(124080353)	+	(CGCC)n	Simple_repeat	1	48	(0)	4028785
336	27.7	1.7	8.7	chr9	16154644	16154896	(122239821)	C	UCON51	LTR?	(14)	236	2	4031534
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
14	20.8	1.2	10.8	chr9	21974812	21974893	(116419824)	+	(CCG)n	Simple_repeat	1	83	(0)	4039935
295	28.1	6.1	11.9	chr9	23170529	23170553	(115224164)	C	MER103C	DNA/hAT-Charlie	(19)	278	258	4041449
1883	15.5	3.9	8.8	chr9	23170554	23170984	(115223733)	C	MER57D	LTR/ERV1	(2)	409	1	4041450
2377	21.6	9.3	8.5	chr9	26950337	26950671	(111444046)	C	LTR8B	LTR/ERV1	(505)	315	3	4046399
572	15.6	6.8	0.0	chr9	26950674	26950782	(111443935)	+	MER57E1	LTR/ERV1	256	372	(0)	4046398
183	37.9	0.0	0.0	chr9	26950845	26950902	(111443815)	C	MIR3	SINE/MIR	(100)	108	51	4046401
1990	13.4	14.7	0.0	chr9	26954190	26954532	(111440185)	+	MER57E2	LTR/ERV1	1	402	(0)	4046409
427	29.7	3.3	10.9	chr9	26954533	26954755	(111439962)	C	L2c	LINE/L2	(164)	3223	3019	4046408
1853	14.7	1.7	1.4	chr9	27440857	27441146	(110953571)	C	MER1B	DNA/hAT-Charlie	(0)	339	49	4047153
3796	14.9	4.2	0.7	chr9	27441139	27441741	(110952976)	C	Tigger7	DNA/TcMar-Tigger	(1865)	626	2	4047154
35	8.5	4.8	0.0	chr9	27573485	27573546	(110821171)	+	(GCCCCG)n	Simple_repeat	1	65	(0)	4047384
185	24.4	0.0	0.0	chr9	27574061	27574105	(110820612)	+	L2a	LINE/L2	3377	3421	(5)	4047385
2384	6.1	5.8	0.0	chr9	37119196	37119490	(101275227)	+	AluSq2	SINE/Alu	1	313	(0)	4062111
412	18.6	0.0	8.1	chr9	37119534	37119619	(101275098)	+	AluJr	SINE/Alu	7	85	(227)	4062112
799	14.7	1.4	0.7	chr9	37119621	37119764	(101274953)	+	LTR23	LTR/ERV1	293	437	(0)	4062105
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
287	32.3	9.2	3.4	chr9	42388348	42388552	(96006165)	C	MIRb	SINE/MIR	(23)	245	28	4069999
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
12	11.1	3.2	3.1	chr9	70420323	70420353	(67974364)	+	(CCCGCG)n	Simple_repeat	1	32	(0)	4083114
1797	18.0	2.0	1.5	chr9	71209638	71209976	(67184741)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	4084347
3340	12.7	0.6	0.8	chr9	71210014	71210507	(67184210)	+	MER1A	DNA/hAT-Charlie	37	529	(0)	4084348
1986	15.8	8.5	1.6	chr9	74465725	74466098	(63928619)	+	MER57D	LTR/ERV1	10	411	(0)	4089425
277	21.7	1.4	1.4	chr9	74466107	74466176	(63928541)	+	L1ME3B	LINE/L1	5658	5727	(446)	4089430
697	25.4	13.2	4.8	chr9	75016583	75016851	(63377866)	+	LFSINE_Vert	SINE/tRNA	130	424	(35)	4090379
18	17.2	0.0	5.9	chr9	76394543	76394593	(62000124)	+	(GCCCC)n	Simple_repeat	1	51	(0)	4092455
2004	19.1	12.1	0.7	chr9	79186079	79186525	(59208192)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	4096862
1195	25.6	8.8	3.6	chr9	79405053	79405493	(58989224)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	4097213
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
13	19.5	0.0	2.7	chr9	79572840	79572876	(58821841)	+	G-rich	Low_complexity	1	37	(0)	4097448
1913	17.6	0.0	0.7	chr9	79894772	79895066	(58499651)	+	AluJb	SINE/Alu	1	293	(19)	4097896
2682	11.2	2.1	0.5	chr9	81906339	81906751	(56487966)	+	LTR56	LTR/ERV1	9	428	(17)	4100785
2967	13.3	0.2	0.0	chr9	81906752	81907180	(56487537)	C	MER57A1	LTR/ERV1	(0)	432	3	4100786
542	30.8	4.5	2.7	chr9	82819173	82819392	(55575325)	+	MIR	SINE/MIR	29	252	(10)	4101981
1762	14.6	10.8	1.9	chr9	82819399	82819719	(55574998)	C	MER57E1	LTR/ERV1	(1)	371	19	4101982
29	0.0	0.0	0.0	chr9	83817838	83817864	(54576853)	+	(GGGGCG)n	Simple_repeat	1	27	(0)	4103550
2080	15.3	3.7	0.3	chr9	87111213	87111553	(51283164)	C	MER57D	LTR/ERV1	(58)	353	1	4108960
1333	12.4	5.0	5.0	chr9	90433726	90434023	(47960694)	+	MER1B	DNA/hAT-Charlie	1	298	(41)	4113818
268	32.3	3.4	6.6	chr9	90680420	90680631	(47714086)	C	MER57A-int	LTR/ERV1	(6500)	1113	909	4114158
1017	18.9	4.9	1.8	chr9	90680655	90680916	(47713801)	C	MER57A-int	LTR/ERV1	(5890)	297	3	4114158
2875	11.5	5.1	1.9	chr9	90680921	90681338	(47713379)	C	MER57A1	LTR/ERV1	(0)	432	1	4114158
4177	25.7	6.9	6.6	chr9	90789075	90790421	(47604296)	+	L1MB8	LINE/L1	10	1352	(5515)	4114301
17	28.4	0.0	4.1	chr9	92809484	92809556	(45585161)	+	(GGATTT)n	Simple_repeat	1	73	(0)	4117251
1201	16.2	19.5	0.0	chr9	94039510	94039749	(44354968)	+	AluJo	SINE/Alu	1	298	(14)	4118939
1243	20.1	17.5	1.4	chr9	94039912	94040326	(44354391)	C	LTR54B	LTR/ERV1	(2)	496	1	4118940
17	20.6	4.0	0.0	chr9	96218264	96218313	(42176404)	+	G-rich	Low_complexity	1	52	(0)	4122423
270	24.1	14.9	3.0	chr9	96218478	96218588	(42176129)	+	MIRc	SINE/MIR	60	178	(52)	4122424
11360	8.6	0.7	0.1	chr9	96865586	96867148	(41527569)	+	THE1B-int	LTR/ERVL-MaLR	1	1573	(7)	4123572
12	5.5	0.0	0.0	chr9	97853932	97853950	(40540767)	+	(GCC)n	Simple_repeat	1	19	(0)	4125273
294	33.8	6.9	0.6	chr9	98806604	98806767	(39587950)	+	L2c	LINE/L2	3113	3287	(100)	4127244
345	21.2	1.0	8.8	chr9	98806769	98806836	(39587881)	C	MLT1G	LTR/ERVL-MaLR	(359)	232	164	4127245
1539	20.0	5.0	0.7	chr9	98806837	98807126	(39587591)	C	AluJr4	SINE/Alu	(9)	303	1	4127246
5459	18.3	1.6	2.8	chr9	99751935	99753101	(38641616)	C	L1ME2z	LINE/L1	(1)	6443	5291	4129022
1697	17.2	8.5	11.3	chr9	101503891	101504209	(36890508)	+	LTR54B	LTR/ERV1	1	323	(175)	4131807
30	0.0	0.0	0.0	chr9	101504210	101504237	(36890480)	+	(T)n	Simple_repeat	1	28	(0)	4131808
1697	17.2	8.5	11.3	chr9	101504238	101504429	(36890288)	+	LTR54B	LTR/ERV1	324	496	(2)	4131807
454	25.8	6.3	1.5	chr9	101504548	101504859	(36889858)	+	MER57A-int	LTR/ERV1	2040	2245	(4086)	4131809
245	25.7	5.6	5.5	chr9	105243999	105244113	(33150604)	+	MIRc	SINE/MIR	73	179	(29)	4137222
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
530	27.0	9.8	1.6	chr9	105332859	105333046	(33061671)	C	MIRb	SINE/MIR	(28)	240	36	4137378
14	6.5	5.6	5.3	chr9	105333349	105333384	(33061333)	+	(CTCCCA)n	Simple_repeat	1	38	(0)	4137379
349	28.6	5.2	1.1	chr9	108756771	108756862	(29637855)	C	L2a	LINE/L2	(10)	3416	3321	4143250
310	30.5	1.3	7.4	chr9	108757023	108757057	(29637660)	C	L1ME4c	LINE/L1	(473)	357	328	4143249
3006	12.8	0.2	1.4	chr9	108757058	108757494	(29637223)	C	MER57A1	LTR/ERV1	(0)	432	1	4143251
12	28.1	6.2	0.0	chr9	109779952	109780015	(28614702)	+	(GCGC)n	Simple_repeat	1	68	(0)	4145117
237	20.8	5.0	3.0	chr9	111515991	111516089	(26878628)	+	L2	LINE/L2	336	436	(2983)	4148016
2314	13.4	9.1	0.5	chr9	111516095	111516484	(26878233)	+	MER57C2	LTR/ERV1	8	434	(0)	4148017
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
317	30.9	1.1	2.1	chr9	113125367	113125462	(25269255)	+	L2c	LINE/L2	3257	3351	(36)	4151026
1487	25.9	2.3	0.8	chr9	113125537	113125921	(25268796)	+	MER57E2	LTR/ERV1	12	402	(0)	4151027
2057	11.2	5.2	0.7	chr9	113225868	113226162	(25168555)	+	AluSx1	SINE/Alu	1	309	(3)	4151235
289	27.2	4.6	3.1	chr9	114397685	114397813	(23996904)	+	MIR3	SINE/MIR	61	191	(17)	4153587
1986	15.5	8.8	1.5	chr9	125696478	125696876	(12697841)	+	MER57F	LTR/ERV1	5	435	(0)	4175148
2433	10.9	0.0	0.0	chr9	129677952	129678263	(8716454)	C	AluSx	SINE/Alu	(0)	312	1	4183378
274	31.6	15.2	10.0	chr9	130534550	130534679	(7860038)	+	L2b	LINE/L2	3248	3385	(2)	4185237
343	13.2	1.9	0.0	chr9	130534908	130534970	(7859747)	+	MER57B2	LTR/ERV1	295	374	(58)	4185238
14	12.7	0.0	0.0	chr9	130534976	130535001	(7859716)	+	(AATA)n	Simple_repeat	1	26	(0)	4185239
2309	12.5	0.3	0.0	chr9	130535010	130535320	(7859397)	+	AluSz	SINE/Alu	1	312	(0)	4185240
2509	16.2	0.2	1.2	chr9	132763429	132763833	(5630884)	+	MER57B2	LTR/ERV1	3	403	(0)	4189467
13368	13.7	3.0	4.4	chr9	132763834	132764017	(5630700)	+	L1MA4	LINE/L1	3979	4165	(2999)	4189465
1896	16.6	0.0	4.0	chr9	132764018	132764342	(5630375)	+	AluJb	SINE/Alu	1	312	(0)	4189468
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
388	32.5	8.7	0.8	chr9	135553549	135553745	(2840972)	C	MIRb	SINE/MIR	(9)	259	44	4193364
180	25.0	5.1	1.8	chr9	136513116	136513172	(1881545)	C	OldhAT1	DNA/hAT-Ac	(899)	1949	1891	4194452
918	18.7	11.3	0.0	chr9	137294334	137294568	(1100149)	+	MLT1J	LTR/ERVL-MaLR	42	306	(206)	4195471
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1943	16.9	1.4	0.8	chrX	3653087	3653445	(152387450)	+	MLT1A0	LTR/ERVL-MaLR	4	364	(1)	4365277
378	15.6	10.0	1.1	chrX	3653450	3653540	(152387355)	+	MLT2B4	LTR/ERVL	1	100	(456)	4365278
1758	20.9	4.6	2.0	chrX	13651007	13651406	(142389489)	+	MER57D	LTR/ERV1	1	411	(0)	4381544
3095	11.2	1.9	3.3	chrX	13651425	13651892	(142389003)	+	MER31A	LTR/ERV1	4	471	(14)	4381545
855	28.8	9.1	2.8	chrX	15145828	15146555	(140894340)	+	L1M5	LINE/L1	5017	5793	(331)	4383844
743	16.3	15.7	2.3	chrX	15146559	15146734	(140894161)	C	MER20	DNA/hAT-Charlie	(0)	219	16	4383845
244	29.1	1.1	4.4	chrX	19911813	19911902	(136128993)	+	L1ME4a	LINE/L1	5966	6052	(72)	4392204
878	19.2	9.4	4.0	chrX	19911923	19912282	(136128613)	C	LTR54	LTR/ERV1	(0)	510	64	4392205
15	10.6	0.0	5.9	chrX	21839743	21839776	(134201119)	+	(GGT)n	Simple_repeat	1	34	(0)	4395016
347	29.2	0.0	6.6	chrX	24550784	24550904	(131489991)	C	MER94	DNA/hAT-Blackjack	(6)	128	16	4399720
250	21.4	4.3	9.2	chrX	24550954	24551051	(131489844)	+	MER5A	DNA/hAT-Charlie	65	157	(32)	4399721
13	14.3	2.3	6.7	chrX	37349563	37349606	(118691289)	+	G-rich	Low_complexity	1	45	(0)	4417288
590	20.5	1.8	0.0	chrX	40855748	40855859	(115185036)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	4423186
1212	18.9	18.9	1.9	chrX	40856064	40856473	(115184422)	C	LTR54B	LTR/ERV1	(2)	496	1	4423187
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
505	34.0	4.7	3.8	chrX	44799951	44800243	(111240652)	C	L2	LINE/L2	(1930)	1489	1194	4429752
1552	21.8	8.1	10.2	chrX	47153146	47153564	(108887331)	C	L1MC4	LINE/L1	(181)	7861	7441	4433494
429	30.4	8.1	2.7	chrX	47153555	47153819	(108887076)	C	L1M5	LINE/L1	(2355)	3791	3513	4433498
1728	15.9	0.0	0.0	chrX	47153820	47154076	(108886819)	+	AluJb	SINE/Alu	45	301	(11)	4433499
372	31.9	6.8	2.6	chrX	47154077	47154143	(108886752)	C	L1M5	LINE/L1	(2634)	3512	3446	4433498
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
1547	23.8	7.3	3.9	chrX	49883783	49884317	(106156578)	C	L1MC4	LINE/L1	(0)	8042	7505	4438522
277	23.2	1.8	0.0	chrX	49884672	49884727	(106156168)	+	LTR88b	LTR/Gypsy?	18	74	(763)	4438523
570	33.0	2.5	8.7	chrX	49884725	49885039	(106155856)	+	LTR88a	LTR/Gypsy?	456	752	(64)	4438524
2463	8.5	0.3	0.0	chrX	72714924	72715228	(83325667)	+	AluSx	SINE/Alu	1	306	(6)	4463777
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
742	12.0	0.0	0.0	chrX	74178481	74178588	(81862307)	+	HERVK3-int	LTR/ERVK	586	693	(6144)	4465236
921	17.1	1.2	0.0	chrX	74178921	74179078	(81861817)	+	HERVK3-int	LTR/ERVK	2330	2489	(4348)	4465236
348	30.4	11.7	9.0	chrX	85852160	85852439	(70188456)	C	L2c	LINE/L2	(37)	3389	3080	4477384
2200	15.1	0.3	0.6	chrX	85852440	85852779	(70188116)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	4477385
348	30.3	11.8	9.4	chrX	85852780	85852915	(70187980)	C	L2c	LINE/L2	(308)	3079	2933	4477384
2319	11.7	0.0	0.0	chrX	93603572	93603878	(62437017)	+	AluSc	SINE/Alu	1	307	(2)	4485848
1356	22.1	7.4	4.5	chrX	93603881	93604235	(62436660)	C	MER57E1	LTR/ERV1	(4)	368	3	4485849
15	28.8	5.7	1.4	chrX	102902344	102902413	(53138482)	+	(AT)n	Simple_repeat	1	74	(0)	4497800
2816	12.5	2.1	0.0	chrX	102902467	102902889	(53138006)	C	MER57A1	LTR/ERV1	(0)	432	1	4497801
623	30.4	2.8	1.2	chrX	104309877	104310119	(51730776)	+	MIR	SINE/MIR	3	249	(13)	4499951
23	20.3	0.0	0.0	chrX	104310513	104310557	(51730338)	+	(GT)n	Simple_repeat	1	45	(0)	4499952
11582	9.4	0.8	1.1	chrX	106209733	106211318	(49829577)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4502487
3999	11.5	0.0	2.8	chrX	109995912	109996455	(46044440)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	4507736
960	21.4	4.3	0.9	chrX	109996593	109996818	(46044077)	C	L1ME3	LINE/L1	(0)	6162	5929	4507737
2222	15.7	0.6	0.3	chrX	111108389	111108726	(44932169)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	4509360
13	16.2	0.0	0.0	chrX	119236159	119236186	(36804709)	+	G-rich	Low_complexity	1	28	(0)	4520704
2435	13.2	7.2	4.5	chrX	119721339	119721743	(36319152)	C	MSTB2	LTR/ERVL-MaLR	(33)	424	1	4521655
995	30.8	9.7	3.8	chrX	119721777	119722263	(36318632)	+	L2c	LINE/L2	2649	3177	(210)	4521657
233	33.0	14.9	3.1	chrX	124967398	124967873	(31073022)	+	L2	LINE/L2	2260	2801	(618)	4529436
2074	18.7	5.1	4.2	chrX	129287904	129288327	(26752568)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4534488
287	26.3	2.1	8.7	chrX	129957965	129958068	(26082827)	+	MamSINE1	SINE/tRNA-RTE	77	173	(117)	4535660
25	11.8	1.6	6.2	chrX	134460090	134460152	(21580743)	+	G-rich	Low_complexity	1	64	(0)	4542713
22	18.8	1.8	1.8	chrX	134460222	134460277	(21580618)	+	(CCGCCT)n	Simple_repeat	1	57	(0)	4542714
2000	16.4	0.0	0.3	chrX	134938450	134938754	(21102141)	+	AluJo	SINE/Alu	2	305	(7)	4543670
1868	18.0	10.9	4.6	chrX	134938755	134938956	(21101939)	+	LTR54B	LTR/ERV1	296	496	(2)	4543669
211	37.2	8.6	0.0	chrX	134938974	134939121	(21101774)	C	MIRc	SINE/MIR	(61)	207	46	4543671
216	21.9	0.0	0.0	chrX	134939146	134939186	(21101709)	+	L3b	LINE/CR1	5191	5231	(1)	4543672
17	3.9	3.7	0.0	chrX	135520841	135520867	(20520028)	+	(GTCCC)n	Simple_repeat	1	28	(0)	4544492
2306	10.9	0.0	0.0	chrX	136161841	136162143	(19878752)	+	AluSz	SINE/Alu	1	303	(9)	4545532
1778	19.2	2.2	3.5	chrX	137720357	137720729	(18320166)	C	MER57E1	LTR/ERV1	(0)	372	5	4548259
1128	28.3	7.4	0.8	chrX	149691345	149691923	(6348972)	C	L1MEc	LINE/L1	(5520)	880	130	4564930
1704	17.4	2.7	10.2	chrX	149691930	149692124	(6348771)	C	MER57E1	LTR/ERV1	(0)	372	176	4564931
1891	17.6	0.0	0.0	chrX	149692125	149692419	(6348476)	+	AluSz6	SINE/Alu	1	295	(17)	4564932
190	26.4	17.5	2.3	chrX	153311017	153311272	(2729623)	+	L2c	LINE/L2	2910	3212	(175)	4570102
12	20.9	4.3	2.1	chrX	154436569	154436614	(1604281)	+	G-rich	Low_complexity	1	48	(0)	4571859
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
301	17.0	0.0	0.0	chrY	10958417	10958463	(46268952)	C	AluYj4	SINE/Alu	(41)	270	224	4588520
226	15.8	0.0	5.0	chrY	10958430	10958469	(46268946)	+	SVA_F	Retroposon/SVA	332	369	(1006)	4588521
1259	23.0	0.4	0.6	chrY	10958474	10959925	(46267490)	+	(CATTC)n	Satellite	1	1451	(0)	4588522
1259	23.0	0.4	0.6	chrY	10960982	10961612	(46265803)	+	(CATTC)n	Satellite	2	631	(0)	4588527
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
294	21.8	0.0	0.0	chrY	11024506	11024560	(46202855)	C	AluYj4	SINE/Alu	(33)	278	224	4588731
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
249	31.4	10.8	10.1	chrY	11287602	11287738	(45939677)	C	LTR48	LTR/ERV1	(13)	631	502	4589062
27	0.0	3.3	0.0	chrY	11287739	11287768	(45939647)	+	(AAAAC)n	Simple_repeat	1	31	(0)	4589063
307	25.3	11.2	7.7	chrY	11287769	11288013	(45939402)	C	LTR48	LTR/ERV1	(143)	501	189	4589062
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157