528	6.5	1.3	4.5	chr1	180089	180998	(248775424)	+	(ACCCTA)n	Simple_repeat	1	922	(0)	268
3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
350	37.0	3.4	1.0	chr1	3910646	3910847	(245045575)	C	MIRc	SINE/MIR	(50)	218	12	4546
208	21.3	9.6	2.6	chr1	10032346	10032422	(238924000)	+	Penelope1_Vert	LINE/Penelope	271	353	(734)	14940
12	13.3	9.3	2.1	chr1	10033001	10033043	(238923379)	+	G-rich	Low_complexity	1	47	(0)	14941
331	30.6	20.2	2.3	chr1	12376242	12376415	(236580007)	+	MIRb	SINE/MIR	1	213	(55)	19703
818	21.4	8.9	1.8	chr1	12376444	12376662	(236579760)	C	MIR	SINE/MIR	(4)	258	23	19704
213	28.2	2.7	4.0	chr1	16237416	16237489	(232718933)	+	MIR	SINE/MIR	108	182	(48)	26999
13	24.8	0.0	0.0	chr1	17597106	17597143	(231359279)	+	(CTGCAT)n	Simple_repeat	1	38	(0)	29820
345	24.2	22.4	0.0	chr1	21607329	21607477	(227348945)	C	MIR	SINE/MIR	(67)	195	4	38280
19	20.1	3.3	3.2	chr1	22053256	22053316	(226903106)	+	(GGCGG)n	Simple_repeat	1	63	(0)	39318
18	20.9	2.2	8.6	chr1	22053317	22053344	(226903078)	+	(GCG)n	Simple_repeat	3	93	(0)	39319
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
19	24.5	0.0	1.8	chr1	23019614	23019668	(225936754)	+	(GGC)n	Simple_repeat	1	55	(0)	41476
4846	11.0	3.9	3.2	chr1	23223386	23224529	(225731893)	C	MER11A	LTR/ERVK	(0)	1266	1	41921
364	33.0	8.2	1.4	chr1	25730805	25731019	(223225403)	C	MIRb	SINE/MIR	(36)	232	2	47725
19	8.2	0.0	0.0	chr1	26993578	26993603	(221962819)	+	(G)n	Simple_repeat	1	26	(0)	50663
18	19.9	0.0	0.0	chr1	26993890	26993930	(221962492)	+	(CCCCGA)n	Simple_repeat	1	41	(0)	50664
17	5.2	0.0	14.6	chr1	27725927	27725981	(221230441)	+	(GCCC)n	Simple_repeat	1	55	(0)	52395
13	16.8	7.5	0.0	chr1	27726039	27726078	(221230344)	+	G-rich	Low_complexity	1	43	(0)	52396
16	17.4	0.0	0.0	chr1	27773082	27773115	(221183307)	+	(CAGCCC)n	Simple_repeat	1	34	(0)	52509
2570	4.2	0.3	0.7	chr1	28329281	28329587	(220626835)	C	AluSp	SINE/Alu	(7)	306	1	53911
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
1364	10.8	1.6	0.0	chr1	28649101	28649286	(220307136)	C	AluSc	SINE/Alu	(120)	189	1	54783
13	7.5	7.1	0.0	chr1	28737394	28737421	(220219001)	+	(TTCC)n	Simple_repeat	1	30	(0)	55024
16725	17.9	2.5	1.9	chr1	29377930	29380337	(219576085)	C	L1MA4	LINE/L1	(3898)	3667	1239	56484
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
14	15.3	0.0	0.0	chr1	32335758	32335786	(216620636)	+	(CCCCT)n	Simple_repeat	1	29	(0)	62646
44	24.0	4.7	2.8	chr1	32964394	32964565	(215991857)	+	(CCGCGG)n	Simple_repeat	1	180	(0)	64113
24	25.4	3.8	0.0	chr1	32964720	32964798	(215991624)	+	(CGC)n	Simple_repeat	1	82	(0)	64114
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
702	32.2	15.0	2.5	chr1	35568391	35568901	(213387521)	C	L2	LINE/L2	(562)	2857	2250	68993
204	31.9	1.7	4.1	chr1	35568922	35569042	(213387380)	C	L2c	LINE/L2	(73)	3314	3197	68995
212	18.0	5.7	0.0	chr1	36149927	36149976	(212806446)	C	L2a	LINE/L2	(5)	3421	3369	70236
1375	17.0	1.7	0.0	chr1	37642770	37642999	(211313423)	C	Tigger4a	DNA/TcMar-Tigger	(1)	235	2	73143
581	32.1	13.4	3.1	chr1	37643000	37643086	(211313336)	+	L2a	LINE/L2	3277	3374	(52)	73139
305	25.3	5.7	0.0	chr1	37643116	37643198	(211313224)	+	MIRc	SINE/MIR	120	207	(61)	73144
208	32.4	7.2	1.1	chr1	37990316	37990440	(210965982)	+	MIR3	SINE/MIR	15	154	(114)	73868
2434	7.0	0.0	2.9	chr1	37990482	37990794	(210965628)	+	AluSx1	SINE/Alu	1	304	(8)	73869
16	16.3	0.0	6.4	chr1	41361380	41361428	(207594994)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	80668
14	24.8	5.3	0.0	chr1	41361441	41361497	(207594925)	+	(AGCCGG)n	Simple_repeat	1	60	(0)	80669
6011	24.4	13.1	3.7	chr1	42388816	42389529	(206566893)	C	L2a	LINE/L2	(575)	2844	2062	82430
2206	10.5	0.0	0.7	chr1	42389530	42389824	(206566598)	+	AluSz	SINE/Alu	1	293	(19)	82433
6011	24.4	13.1	3.7	chr1	42389825	42390026	(206566396)	C	L2a	LINE/L2	(1358)	2061	1820	82430
2262	12.6	0.3	0.0	chr1	42390027	42390336	(206566086)	C	AluSz	SINE/Alu	(0)	312	2	82434
4038	5.0	2.2	2.2	chr1	42503864	42504372	(206452050)	C	MER9a2	LTR/ERVK	(4)	509	1	82634
997	15.0	6.0	3.6	chr1	42504373	42504533	(206451889)	C	HUERS-P3b-int	LTR/ERV1	(31)	8888	8720	82633
946	14.1	0.6	0.6	chr1	42504716	42504893	(206451529)	C	PABL_A-int	LTR/ERV1	(2450)	2565	2388	82635
28866	15.5	8.4	10.3	chr1	42504902	42506936	(206449486)	C	HUERS-P3b-int	LTR/ERV1	(473)	6945	4892	82633
388	28.6	6.8	1.4	chr1	42816685	42816893	(206139529)	+	MIRc	SINE/MIR	2	222	(46)	83211
21	13.0	0.0	4.3	chr1	42817424	42817469	(206138953)	+	G-rich	Low_complexity	1	46	(0)	83212
12	26.3	0.0	5.5	chr1	42817470	42817478	(206138944)	+	(GGCCG)n	Simple_repeat	1	55	(0)	83213
17	10.1	3.1	0.0	chr1	42958185	42958216	(205998206)	+	(GCCGGG)n	Simple_repeat	1	33	(0)	83430
4269	18.1	5.1	2.5	chr1	44144496	44145177	(204811245)	+	L1M3	LINE/L1	3142	3833	(2307)	85536
501	13.4	0.0	3.5	chr1	44145178	44145262	(204811160)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(983)	85	4	85539
1876	14.2	3.6	6.3	chr1	44145265	44145661	(204810761)	+	L1MB3	LINE/L1	5781	6166	(17)	85540
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
42462	12.0	2.1	2.1	chr1	45753815	45756245	(203200177)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	5174	88694
466	23.0	10.8	2.0	chr1	46667842	46667992	(202288430)	+	MIR	SINE/MIR	21	186	(82)	90457
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
26	18.6	3.1	6.1	chr1	47508214	47508309	(201448113)	+	G-rich	Low_complexity	1	99	(0)	91745
16	0.0	0.0	0.0	chr1	47508864	47508880	(201447542)	+	(T)n	Simple_repeat	1	17	(0)	91746
1347	24.1	4.2	2.2	chr1	48497777	48498222	(200458200)	+	MER20B	DNA/hAT-Charlie	329	783	(0)	93401
283	34.2	10.7	5.7	chr1	48498426	48499021	(200457401)	C	MamGypLTR3	LTR/Gypsy	(0)	894	266	93402
38	7.0	0.0	0.0	chr1	51237425	51237470	(197718952)	+	(TA)n	Simple_repeat	1	46	(0)	98249
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
44476	6.9	0.8	0.7	chr1	52217413	52219749	(196736673)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	5271	100420
538	29.6	11.7	6.1	chr1	53848656	53848893	(195107529)	+	MLT1J	LTR/ERVL-MaLR	13	257	(255)	103887
2470	20.6	11.3	0.5	chr1	53848894	53849509	(195106913)	C	MER76	LTR/ERVL	(0)	691	1	103888
536	22.6	11.1	3.7	chr1	53889349	53889564	(195066858)	+	MIRb	SINE/MIR	9	242	(26)	103980
1046	26.1	3.2	3.8	chr1	54905145	54905487	(194050935)	C	Charlie18a	DNA/hAT-Charlie	(0)	342	2	106140
903	22.0	3.8	0.0	chr1	54905501	54905677	(194050745)	+	MER5A	DNA/hAT-Charlie	3	186	(3)	106141
2265	8.1	0.3	0.3	chr1	54905687	54905969	(194050453)	+	AluY	SINE/Alu	1	283	(28)	106142
191	24.4	4.2	0.0	chr1	54950486	54950530	(194005892)	+	L2b	LINE/L2	3311	3357	(18)	106213
466	29.0	2.2	3.3	chr1	54950817	54950998	(194005424)	C	MamRep564	Unknown	(70)	287	108	106214
13	16.5	0.0	5.3	chr1	55215174	55215211	(193741211)	+	(CGCGC)n	Simple_repeat	1	38	(0)	106639
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
6975	23.4	4.5	3.3	chr1	55745205	55746917	(193209505)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	2	107669
6504	23.4	8.2	3.7	chr1	58631775	58633422	(190323000)	+	MSTD-int	LTR/ERVL-MaLR	8	1735	(0)	113219
215	27.2	17.4	0.9	chr1	58903525	58903639	(190052783)	C	MIRb	SINE/MIR	(12)	256	119	113783
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
538	26.9	1.0	8.1	chr1	58904342	58904551	(190051871)	+	MIRb	SINE/MIR	38	232	(36)	113785
256	35.9	4.5	1.5	chr1	59312305	59312434	(189643988)	+	MIRb	SINE/MIR	51	184	(84)	114640
4449	17.1	2.9	5.5	chr1	59789530	59790099	(189166323)	C	L1MB5	LINE/L1	(0)	6174	5643	115462
928	20.7	5.5	1.4	chr1	60572423	60572633	(188383789)	C	MER58A	DNA/hAT-Charlie	(2)	222	3	116761
5181	23.3	8.8	2.9	chr1	61036168	61036810	(187919612)	C	L1ME3B	LINE/L1	(1980)	5257	4597	117554
41	24.9	2.5	0.0	chr1	61082191	61082308	(187874114)	+	(GAGC)n	Simple_repeat	1	121	(0)	117647
16	18.9	0.0	0.0	chr1	61082351	61082380	(187874042)	+	(C)n	Simple_repeat	1	30	(0)	117648
22	19.3	6.8	4.5	chr1	61082380	61082482	(187873940)	+	(CGCGG)n	Simple_repeat	1	110	(0)	117649
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
20	24.2	0.0	5.3	chr1	61082849	61082923	(187873499)	+	G-rich	Low_complexity	1	75	(0)	117652
22	22.4	0.0	0.0	chr1	61082925	61082980	(187873442)	+	(GT)n	Simple_repeat	1	56	(0)	117653
5749	20.2	0.8	0.5	chr1	61565272	61566291	(187390131)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	629	118370
798	12.1	0.8	2.2	chr1	61566276	61566410	(187390012)	C	MSTB-int	LTR/ERVL-MaLR	(1518)	133	1	118370
861	13.3	0.0	0.0	chr1	61873522	61873656	(187082766)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	231	119027
2237	15.2	4.3	1.2	chr1	61873657	61874084	(187082338)	+	MER61C	LTR/ERV1	1	428	(0)	119028
851	22.6	0.4	10.3	chr1	61874085	61874172	(187082250)	C	MLT1A0	LTR/ERVL-MaLR	(130)	235	158	119027
1920	14.4	2.5	0.0	chr1	61874173	61874496	(187081926)	C	AluSz	SINE/Alu	(0)	312	1	119029
3740	11.2	11.7	1.1	chr1	62177557	62178195	(186778227)	+	MER4D	LTR/ERV1	178	893	(10)	119654
274	28.5	4.5	8.0	chr1	62178240	62178426	(186777996)	+	L2c	LINE/L2	3106	3285	(102)	119658
233	17.6	0.0	0.0	chr1	62178430	62178463	(186777959)	C	LTR8	LTR/ERV1	(0)	691	658	119659
2618	4.5	3.5	0.3	chr1	62178464	62178796	(186777626)	C	LTR14A	LTR/ERVK	(0)	344	1	119660
363	20.9	12.9	1.7	chr1	62435731	62435847	(186520575)	+	L2a	LINE/L2	3291	3422	(4)	120247
22	20.2	7.4	1.1	chr1	63523647	63523727	(185432695)	+	(TCTCTG)n	Simple_repeat	1	87	(0)	122201
12	15.3	3.5	0.0	chr1	65066511	65066539	(183889883)	+	(CCCT)n	Simple_repeat	1	30	(0)	125012
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
180	24.5	2.0	2.0	chr1	65147285	65147334	(183809088)	+	MIRb	SINE/MIR	208	257	(11)	125210
17	7.9	0.0	0.0	chr1	65147483	65147509	(183808913)	+	(GGAGT)n	Simple_repeat	1	27	(0)	125211
28	13.7	0.0	4.8	chr1	65310202	65310263	(183646159)	+	G-rich	Low_complexity	1	62	(0)	125554
11	18.6	0.0	7.1	chr1	65420513	65420554	(183535868)	+	G-rich	Low_complexity	1	42	(0)	125759
249	29.4	3.4	2.3	chr1	65539693	65539779	(183416643)	+	MLT1N2	LTR/ERVL-MaLR	117	204	(358)	125956
614	24.7	1.7	0.0	chr1	65539871	65540040	(183416382)	+	MLT1N2	LTR/ERVL-MaLR	366	538	(24)	125956
264	19.3	3.4	1.7	chr1	66810212	66810269	(182146153)	C	MIRb	SINE/MIR	(6)	262	204	127794
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
15	25.9	1.4	5.6	chr1	67053630	67053700	(181902722)	+	(GCCC)n	Simple_repeat	1	72	(0)	128151
27	21.7	1.5	0.0	chr1	67053742	67053806	(181902616)	+	(GCC)n	Simple_repeat	1	66	(0)	128152
2253	19.4	2.8	4.8	chr1	67283450	67283802	(181672620)	C	MER34D	LTR/ERV1	(71)	508	162	128548
92	4.8	1.8	0.0	chr1	67283803	67283912	(181672510)	+	(TTTC)n	Simple_repeat	1	112	(0)	128549
2650	7.5	0.0	0.3	chr1	67283913	67284262	(181672160)	C	L1PA8	LINE/L1	(19)	6153	5805	128550
567	29.1	3.2	0.8	chr1	68321019	68321214	(180635208)	C	MIR	SINE/MIR	(10)	252	49	130471
682	14.5	15.1	0.0	chr1	68442018	68442141	(180514281)	C	MER3	DNA/hAT-Charlie	(63)	146	1	130664
469	33.5	15.7	1.9	chr1	68442175	68442590	(180513832)	C	L2c	LINE/L2	(179)	3208	2734	130663
204	23.1	0.0	0.0	chr1	70083493	70083544	(178872878)	+	L2a	LINE/L2	2017	2068	(1351)	132837
1204	26.4	12.9	2.5	chr1	70083564	70084131	(178872291)	+	L2a	LINE/L2	2336	2971	(448)	132837
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
1518	21.0	8.0	0.8	chr1	70447104	70447487	(178508935)	C	MLT2D	LTR/ERVL	(0)	414	1	133450
35	0.0	0.0	0.0	chr1	72282595	72282627	(176673795)	+	(T)n	Simple_repeat	1	33	(0)	136018
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
319	35.4	2.3	0.0	chr1	74145384	74145510	(174810912)	+	MLT1N2	LTR/ERVL-MaLR	432	561	(1)	138269
18	12.0	0.0	5.0	chr1	75616022	75616061	(173340361)	+	(CGGCT)n	Simple_repeat	1	40	(0)	140186
23	22.0	3.2	0.0	chr1	75616111	75616185	(173340237)	+	(TGC)n	Simple_repeat	1	77	(0)	140187
2385	12.5	1.7	11.9	chr1	75720631	75721277	(173235145)	C	MER4E	LTR/ERV1	(9)	757	1	140338
1433	13.9	0.0	7.3	chr1	75721279	75721526	(173234896)	+	MER30	DNA/hAT-Charlie	1	230	(0)	140339
2602	19.1	9.7	2.9	chr1	75757742	75758047	(173198375)	C	MER21B	LTR/ERVL	(60)	808	466	140405
2138	12.4	0.0	3.1	chr1	75758048	75758370	(173198052)	C	AluSq2	SINE/Alu	(0)	313	1	140406
2492	8.6	0.3	0.0	chr1	75766580	75766883	(173189539)	+	AluSp	SINE/Alu	1	305	(8)	140422
285	26.8	6.7	2.5	chr1	75766884	75766914	(173189508)	C	LTR37A	LTR/ERV1	(190)	278	246	140421
2236	12.9	1.5	2.3	chr1	75766915	75767256	(173189166)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	140423
6535	22.9	6.3	5.1	chr1	75845187	75846897	(173109525)	C	MSTD-int	LTR/ERVL-MaLR	(1)	1734	2	140551
8776	14.3	3.0	2.3	chr1	75871948	75873402	(173083020)	+	Tigger4	DNA/TcMar-Tigger	4	1468	(1263)	140574
675	18.8	3.2	6.9	chr1	77533536	77533633	(171422789)	C	MER5A1	DNA/hAT-Charlie	(56)	110	9	143052
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
5180	15.0	3.9	0.3	chr1	78615793	78617483	(170338939)	+	L1PA17	LINE/L1	4394	6143	(23)	144817
1509	24.2	14.3	1.3	chr1	78617589	78618057	(170338365)	+	LTR41	LTR/ERVL	5	544	(224)	144818
13011	13.7	6.1	1.9	chr1	79944449	79946534	(169009888)	+	Tigger4	DNA/TcMar-Tigger	357	2551	(180)	146520
5024	24.6	6.8	3.8	chr1	80847672	80849028	(168107394)	C	MLT1A1-int	LTR/ERVL-MaLR	(11)	1724	325	147666
190	30.5	4.8	12.4	chr1	81218903	81219104	(167737318)	C	X6B_LINE	LINE/CR1	(34)	1038	853	148157
217	30.5	6.3	7.4	chr1	82141431	82141688	(166814734)	+	LFSINE_Vert	SINE/tRNA	151	405	(54)	149413
7210	6.6	15.1	2.2	chr1	83251353	83252451	(165703971)	C	MER11A	LTR/ERVK	(0)	1266	1	150928
12	16.9	0.0	0.0	chr1	84620578	84620604	(164335818)	+	(CTTC)n	Simple_repeat	1	27	(0)	152805
18	19.6	0.0	4.0	chr1	84621094	84621143	(164335279)	+	G-rich	Low_complexity	1	50	(0)	152806
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
18	7.5	0.0	0.0	chr1	84893245	84893272	(164063150)	+	(GCCCC)n	Simple_repeat	1	28	(0)	153270
1162	15.1	0.5	9.2	chr1	85165866	85166059	(163790363)	C	AluJr	SINE/Alu	(0)	312	126	153728
2044	13.0	1.4	0.3	chr1	85166060	85166352	(163790070)	+	AluSx	SINE/Alu	1	296	(16)	153729
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
20	0.0	0.0	0.0	chr1	85464590	85464611	(163491811)	+	(AC)n	Simple_repeat	1	22	(0)	154198
8650	12.5	4.6	9.9	chr1	86110386	86112054	(162844368)	+	LTR12C	LTR/ERV1	3	1579	(0)	155168
554	26.1	5.0	2.5	chr1	86754355	86754511	(162201911)	C	MIRb	SINE/MIR	(0)	268	108	156034
2016	11.9	0.3	1.4	chr1	86793922	86794244	(162162178)	+	AluSq	SINE/Alu	1	313	(0)	156113
2089	12.1	0.3	0.0	chr1	86794251	86794532	(162161890)	+	AluSx1	SINE/Alu	1	283	(29)	156114
12	20.4	5.6	3.5	chr1	88684485	88684538	(160271884)	+	(CTCTCCC)n	Simple_repeat	1	57	(0)	158816
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
3880	18.6	5.5	4.3	chr1	89959246	89960073	(158996349)	C	MER21C	LTR/ERVL	(5)	933	1	160617
811	22.6	4.6	1.6	chr1	89960074	89960262	(158996160)	+	L1MB7	LINE/L1	5882	6076	(108)	160614
2574	21.2	2.0	1.1	chr1	91470144	91470517	(157485905)	+	MLT1A1-int	LTR/ERVL-MaLR	163	545	(1190)	162736
4197	21.6	1.8	3.3	chr1	91470548	91471488	(157484934)	+	MLT1A1-int	LTR/ERVL-MaLR	809	1735	(0)	162736
4306	6.3	0.6	0.4	chr1	91669360	91669904	(157286518)	C	Harlequin-int	LTR/ERV1	(6088)	808	263	163072
2364	9.2	0.7	0.0	chr1	92783532	92783836	(156172586)	+	AluSc	SINE/Alu	1	307	(2)	165062
17	0.0	9.1	0.0	chr1	92783837	92783850	(156172572)	+	(AAAAGA)n	Simple_repeat	4	17	(0)	165063
14	8.1	0.0	6.7	chr1	92784627	92784656	(156171766)	+	(GGC)n	Simple_repeat	1	30	(0)	165065
15	11.2	0.0	3.2	chr1	92784787	92784821	(156171601)	+	(CCGC)n	Simple_repeat	1	33	(0)	165066
7198	6.7	13.9	3.1	chr1	93479027	93480151	(155476271)	C	MER11A	LTR/ERVK	(0)	1266	1	166380
14	18.6	2.7	0.0	chr1	93681782	93681818	(155274604)	+	(GCTCCG)n	Simple_repeat	1	38	(0)	166666
208	26.0	0.0	0.0	chr1	94248239	94248288	(154708134)	+	L2b	LINE/L2	3323	3372	(3)	167501
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
12235	7.9	1.4	0.1	chr1	95062287	95064666	(153891756)	C	L1PA11	LINE/L1	(0)	6174	3767	168780
31	22.1	2.0	4.8	chr1	95234014	95234115	(153722307)	+	(GCCCC)n	Simple_repeat	1	104	(0)	169060
874	27.7	1.3	0.9	chr1	95857977	95858198	(153098224)	+	MLT1F2	LTR/ERVL-MaLR	4	226	(334)	169906
2826	25.4	5.8	2.2	chr1	95858398	95858740	(153097682)	C	L1ME1	LINE/L1	(2498)	3823	3461	169903
2057	13.3	0.7	0.0	chr1	96662473	96662750	(152293672)	C	AluSz6	SINE/Alu	(27)	285	6	170976
2151	9.5	0.0	0.7	chr1	96662760	96663033	(152293389)	C	AluSx1	SINE/Alu	(9)	303	32	170977
16	0.0	0.0	0.0	chr1	96843302	96843318	(152113104)	+	(A)n	Simple_repeat	1	17	(0)	171249
1487	18.6	3.1	3.1	chr1	96843319	96843667	(152112755)	C	MLT1A	LTR/ERVL-MaLR	(25)	349	1	171250
201	30.0	4.3	6.2	chr1	100037817	100037912	(148918510)	+	MIRb	SINE/MIR	96	189	(79)	175849
2153	13.5	0.3	1.0	chr1	100350912	100351222	(148605200)	+	AluSz6	SINE/Alu	1	309	(3)	176445
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
4182	8.5	0.0	0.4	chr1	102774731	102775286	(146181136)	C	MER41A	LTR/ERV1	(0)	554	1	179756
345	30.7	1.7	0.0	chr1	103293696	103293795	(145662627)	C	L2a	LINE/L2	(1)	3425	3270	180317
15771	14.9	2.9	0.6	chr1	103502754	103505422	(145451000)	+	Tigger4	DNA/TcMar-Tigger	1	2731	(0)	180602
1011	22.4	1.8	0.6	chr1	103860552	103866424	(145089998)	+	ALR/Alpha	Satellite/centr	1	5946	(0)	181025
12	21.3	4.4	2.1	chr1	108049680	108049724	(140906698)	+	(CAG)n	Simple_repeat	1	47	(0)	186282
13	23.6	1.9	3.7	chr1	108200192	108200244	(140756178)	+	G-rich	Low_complexity	1	54	(0)	186508
479	25.0	0.0	0.0	chr1	109667775	109667870	(139288552)	C	AluJo	SINE/Alu	(27)	285	190	188930
22969	7.0	0.6	1.1	chr1	109703646	109706693	(139249729)	+	HERVK11-int	LTR/ERVK	1	3033	(4920)	188981
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
5026	23.1	3.6	2.4	chr1	112985685	112986812	(135969610)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	594	194206
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
310	30.9	10.2	4.8	chr1	113904220	113904450	(135051972)	C	L2c	LINE/L2	(921)	2498	2254	195760
12	28.0	2.3	0.0	chr1	116373364	116373407	(132583015)	+	(CCTC)n	Simple_repeat	1	45	(0)	199614
19	12.6	4.4	2.1	chr1	116909989	116910033	(132046389)	+	GA-rich	Low_complexity	1	47	(0)	200486
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
16	22.7	5.2	3.7	chr1	117121531	117121613	(131834809)	+	(CCCGCCA)n	Simple_repeat	1	84	(0)	200776
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
4005	27.6	11.7	1.8	chr1	118356493	118361441	(130594981)	+	L1ME2	LINE/L1	722	6164	(68)	202658
39	8.3	6.4	0.0	chr1	118988141	118988218	(129968204)	+	(TC)n	Simple_repeat	1	83	(0)	203448
8170	21.9	4.6	4.1	chr1	119902051	119903776	(129052646)	+	MLT1A0-int	LTR/ERVL-MaLR	1	1735	(0)	204721
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
23	29.4	2.7	0.0	chr1	144552484	144552558	(104403864)	+	(TA)n	Simple_repeat	1	77	(0)	209608
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
1978	14.0	1.0	0.3	chr1	145967181	145967472	(102988950)	C	AluSz6	SINE/Alu	(16)	296	3	211840
367	30.4	15.6	3.4	chr1	145967473	145967535	(102988887)	C	L1MC5a	LINE/L1	(2646)	131	54	211839
667	21.9	2.6	8.1	chr1	145967605	145967867	(102988555)	+	L2a	LINE/L2	3279	3421	(5)	211841
943	18.5	13.6	0.0	chr1	147075042	147075225	(101881197)	+	AluJb	SINE/Alu	1	213	(99)	213614
12	7.3	10.3	0.0	chr1	147075247	147075275	(101881147)	+	A-rich	Low_complexity	1	32	(0)	213615
297	30.6	2.4	1.2	chr1	147075276	147075437	(101880985)	C	L1ME2z	LINE/L1	(1287)	4859	4696	213613
290	22.1	9.6	0.9	chr1	147083989	147084093	(101872329)	C	LTR75B	LTR/ERVL	(489)	119	5	213626
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
26	23.2	1.4	1.4	chr1	147600187	147600258	(101356164)	+	(CGC)n	Simple_repeat	1	73	(0)	214369
2949	15.8	10.6	1.1	chr1	147719122	147719676	(101236746)	+	LTR18B	LTR/ERVL	1	614	(0)	214520
404	30.1	13.1	0.5	chr1	149899122	149899321	(99057101)	+	L2c	LINE/L2	3151	3379	(8)	217957
248	32.8	0.0	0.0	chr1	149899324	149899384	(99057038)	+	MIR3	SINE/MIR	117	177	(31)	217964
1679	23.2	8.7	3.4	chr1	150172964	150173624	(98782798)	C	MER77	LTR/ERVL	(130)	808	1	218446
28	0.0	0.0	0.0	chr1	150364656	150364681	(98591741)	+	(CCG)n	Simple_repeat	1	26	(0)	218877
12	9.2	0.0	4.0	chr1	150364717	150364741	(98591681)	+	(GGC)n	Simple_repeat	1	25	(0)	218878
2191	13.1	0.0	1.3	chr1	151350924	151351228	(97605194)	C	AluSz	SINE/Alu	(11)	301	1	221020
884	23.5	7.0	11.4	chr1	151351229	151351388	(97605034)	C	LTR25	LTR/ERV1	(68)	776	726	221021
1703	11.9	0.0	3.6	chr1	151351389	151351570	(97604852)	C	AluSx3	SINE/Alu	(2)	309	136	221022
240	24.4	6.1	10.7	chr1	151734690	151734895	(97221527)	C	L2-3_Crp	LINE/L2	(1303)	793	598	221821
265	20.8	21.3	0.0	chr1	151735037	151735132	(97221290)	+	MIR	SINE/MIR	64	185	(77)	221822
1912	14.7	3.7	0.0	chr1	151735461	151735745	(97220677)	C	AluSz	SINE/Alu	(12)	300	5	221823
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
27	19.4	3.4	4.3	chr1	156053682	156053772	(92902650)	+	(CCCG)n	Simple_repeat	1	90	(0)	229382
40	4.5	0.0	0.0	chr1	156053813	156053858	(92902564)	+	(CTCCC)n	Simple_repeat	1	46	(0)	229383
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
19	9.2	2.9	0.0	chr1	156082822	156082856	(92873566)	+	(GGGGGCC)n	Simple_repeat	1	36	(0)	229435
20	19.1	1.7	3.4	chr1	156082887	156082944	(92873478)	+	(CGCTCCC)n	Simple_repeat	1	59	(0)	229436
311	21.9	0.0	13.7	chr1	156106150	156106208	(92850214)	+	MER81	DNA/hAT-Blackjack	62	114	(0)	229494
19	14.4	0.0	0.0	chr1	156106429	156106459	(92849963)	+	(CA)n	Simple_repeat	1	31	(0)	229496
1013	12.6	4.0	12.2	chr1	156602431	156602677	(92353745)	+	AluJb	SINE/Alu	6	231	(81)	230417
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
19	23.3	4.6	0.0	chr1	157993504	157993577	(90962845)	+	(GCGCGG)n	Simple_repeat	1	77	(0)	232476
13	18.9	2.8	0.0	chr1	158113627	158113662	(90842760)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	232694
450	15.2	0.0	1.2	chr1	158951706	158951785	(90004637)	C	HERVK22-int	LTR/ERVK	(3930)	2907	2829	233715
834	18.1	2.0	0.0	chr1	158951785	158951928	(90004494)	C	HERVK22-int	LTR/ERVK	(4364)	2473	2327	233715
18	0.0	0.0	0.0	chr1	158952109	158952128	(90004294)	+	(T)n	Simple_repeat	1	20	(0)	233716
2243	14.1	3.5	1.0	chr1	158952347	158952739	(90003683)	C	HERVK22-int	LTR/ERVK	(6096)	741	339	233715
14	9.3	0.0	0.0	chr1	161439874	161439896	(87516526)	+	(GGT)n	Simple_repeat	1	23	(0)	237535
621	5.4	0.0	0.0	chr1	161440169	161440242	(87516180)	C	tRNA-Gly-GGA	tRNA	(1)	74	1	237536
18	25.5	2.3	5.6	chr1	161440260	161440347	(87516075)	+	(CCCG)n	Simple_repeat	1	90	(0)	237537
645	1.4	0.0	0.0	chr1	161540241	161540314	(87416108)	+	tRNA-Asn-AAC	tRNA	1	74	(3)	237691
2865	1.0	0.0	0.0	chr1	161565907	161566211	(87390211)	C	AluYa5	SINE/Alu	(6)	305	1	237734
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
1716	15.3	0.7	8.1	chr1	164345752	164346071	(84610351)	+	AluSx1	SINE/Alu	1	296	(16)	241949
17	18.2	0.0	0.0	chr1	164559329	164559359	(84397063)	+	G-rich	Low_complexity	1	31	(0)	242317
15	12.0	3.7	0.0	chr1	164636858	164636884	(84319538)	+	(TG)n	Simple_repeat	1	28	(0)	242429
22	28.4	0.0	0.0	chr1	165445150	165445208	(83511214)	+	(GCC)n	Simple_repeat	1	59	(0)	243640
15	4.6	17.8	0.0	chr1	165698592	165698636	(83257786)	+	G-rich	Low_complexity	1	53	(0)	244109
14	6.9	0.0	10.5	chr1	165827486	165827523	(83128899)	+	G-rich	Low_complexity	1	38	(0)	244381
1151	18.6	4.8	2.0	chr1	167143617	167143838	(81812584)	C	L1M4c	LINE/L1	(2841)	3541	3310	246214
1303	17.4	0.0	0.0	chr1	167143856	167144056	(81812366)	C	AluJr	SINE/Alu	(21)	291	91	246218
442	14.1	11.5	0.0	chr1	167144061	167144152	(81812270)	C	L1M4c	LINE/L1	(3431)	2951	2848	246214
1371	15.2	0.0	5.2	chr1	167144153	167144382	(81812040)	C	AluJb	SINE/Alu	(2)	310	93	246219
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
12	13.9	0.0	0.0	chr1	167220935	167220958	(81735464)	+	(CAG)n	Simple_repeat	1	24	(0)	246372
13	4.7	0.0	4.2	chr1	167721563	167721586	(81234836)	+	(TTTC)n	Simple_repeat	1	24	(0)	247193
405	23.7	12.0	6.6	chr1	167803571	167803751	(81152671)	C	MIR3	SINE/MIR	(8)	200	9	247340
22059	8.2	1.2	0.5	chr1	168933849	168937744	(80018678)	C	L1PB1	LINE/L1	(1)	6150	2231	249162
14	19.3	1.6	7.9	chr1	169106093	169106154	(79850268)	+	(CGCGCC)n	Simple_repeat	1	63	(0)	249448
197	39.0	10.2	1.6	chr1	170775256	170775380	(78181042)	+	MIRc	SINE/MIR	94	230	(38)	251756
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
249	26.7	1.6	0.0	chr1	175000658	175000745	(73955677)	+	MIR	SINE/MIR	79	170	(38)	258068
298	39.1	6.9	1.2	chr1	176824647	176824809	(72131613)	+	MIR1_Amn	SINE/MIR	33	205	(25)	260765
5804	9.0	3.9	2.3	chr1	180421024	180421878	(68534544)	C	L1PA11	LINE/L1	(22)	6152	5284	266338
6477	15.2	2.1	1.2	chr1	180421879	180422199	(68534223)	C	Tigger2	DNA/TcMar-Tigger	(1600)	1118	791	266337
13	14.2	3.2	0.0	chr1	181180790	181180820	(67775602)	+	(GGTGG)n	Simple_repeat	1	32	(0)	267609
1963	12.6	3.2	0.0	chr1	181181235	181181542	(67774880)	C	AluSx1	SINE/Alu	(0)	312	2	267610
264	28.8	12.6	0.0	chr1	182942537	182942647	(66013775)	C	Charlie18a	DNA/hAT-Charlie	(212)	130	4	270303
17	9.7	2.9	2.8	chr1	183805083	183805117	(65151305)	+	(GCTC)n	Simple_repeat	1	36	(0)	271671
13	8.5	4.0	0.0	chr1	183805140	183805164	(65151258)	+	(CGG)n	Simple_repeat	1	26	(0)	271672
15601	12.4	3.1	1.3	chr1	184124229	184126620	(64829802)	+	Tigger4	DNA/TcMar-Tigger	72	2507	(224)	272148
273	37.1	2.8	1.4	chr1	185473522	185473729	(63482693)	C	L2	LINE/L2	(489)	2930	2720	274311
775	27.8	6.1	5.5	chr1	186524939	186525259	(62431163)	C	L1MEd	LINE/L1	(5343)	1760	1439	275717
33	0.0	0.0	0.0	chr1	186525272	186525302	(62431120)	+	(T)n	Simple_repeat	1	31	(0)	275720
13	14.3	4.8	4.5	chr1	186680276	186680317	(62276105)	+	(GGCGC)n	Simple_repeat	1	44	(0)	275944
1190	26.7	4.7	8.1	chr1	186978713	186979180	(61977242)	C	LTR16C	LTR/ERVL	(0)	489	39	276395
811	28.4	20.4	2.0	chr1	187530927	187531672	(61424750)	C	L2a	LINE/L2	(2)	3424	2504	277145
50	4.0	0.0	0.0	chr1	190478703	190478754	(58477668)	+	(TC)n	Simple_repeat	1	52	(0)	280953
792	35.2	5.4	5.9	chr1	190769950	190770559	(58185863)	C	L2	LINE/L2	(995)	2424	1818	281338
2245	6.9	0.0	2.1	chr1	190770585	190770689	(58185733)	+	AluY	SINE/Alu	30	132	(179)	281339
2657	5.0	0.0	0.0	chr1	192837388	192837685	(56118737)	C	AluY	SINE/Alu	(13)	298	1	283924
752	29.0	9.3	1.1	chr1	192837761	192838046	(56118376)	+	LTR16C	LTR/ERVL	178	489	(0)	283925
12531	16.9	4.5	4.8	chr1	195342564	195345099	(53611323)	+	Tigger4	DNA/TcMar-Tigger	205	2731	(0)	287338
12759	16.9	5.6	3.6	chr1	195555710	195557324	(53399098)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	1061	287561
2483	6.6	0.3	0.0	chr1	195557325	195557612	(53398810)	C	AluY	SINE/Alu	(22)	289	1	287562
1945	15.2	2.5	12.1	chr1	196538363	196538758	(52417664)	C	LTR18A	LTR/ERVL	(0)	357	1	288784
23788	11.2	1.7	1.4	chr1	196986364	196992657	(51963765)	C	L1PA6	LINE/L1	(1)	6338	13	289332
18	14.7	4.3	2.0	chr1	197201312	197201358	(51755064)	+	(CCCCT)n	Simple_repeat	1	49	(0)	289611
24	12.2	0.0	0.0	chr1	197676418	197676453	(51279969)	+	(AC)n	Simple_repeat	1	36	(0)	290211
15	7.6	3.6	0.0	chr1	197902930	197902957	(51053465)	+	(CCCGC)n	Simple_repeat	1	29	(0)	290519
1520	19.9	4.3	0.7	chr1	200014073	200014364	(48942058)	+	AluJb	SINE/Alu	1	303	(9)	293484
641	21.6	0.8	0.0	chr1	200014509	200014624	(48941798)	C	AluJb	SINE/Alu	(195)	117	1	293485
15	0.0	0.0	0.0	chr1	200014659	200014675	(48941747)	+	(TG)n	Simple_repeat	1	17	(0)	293486
811	10.4	0.0	0.0	chr1	200014690	200014795	(48941627)	C	U6	snRNA	(1)	106	1	293487
220	32.3	1.0	6.8	chr1	201170595	201170697	(47785725)	C	L2b	LINE/L2	(7)	3419	3310	295611
2111	14.4	0.0	0.0	chr1	202980893	202981197	(45975225)	+	AluSx1	SINE/Alu	1	305	(7)	298859
13790	11.6	1.3	2.4	chr1	202981198	202982289	(45974133)	C	Tigger1	DNA/TcMar-Tigger	(928)	1490	398	298858
654	27.0	1.2	1.8	chr1	204300697	204300862	(44655560)	+	MIRb	SINE/MIR	22	186	(82)	301304
811	24.2	11.6	6.0	chr1	204300868	204301184	(44655238)	+	MER46C	DNA/TcMar-Tigger	1	337	(1)	301305
3823	20.7	6.4	8.1	chr1	204917489	204918267	(44038155)	C	L1MC5	LINE/L1	(913)	8391	7651	302513
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
15	29.1	1.9	0.0	chr1	205631725	205631778	(43324644)	+	(CGG)n	Simple_repeat	1	55	(0)	303803
2200	10.1	0.7	0.7	chr1	206075605	206075900	(42880522)	C	AluSx1	SINE/Alu	(16)	296	1	304526
9790	13.0	3.1	1.2	chr1	206075901	206076157	(42880265)	+	Tigger4	DNA/TcMar-Tigger	958	1220	(1511)	304525
1980	12.7	0.0	4.2	chr1	206076158	206076465	(42879957)	C	AluJo	SINE/Alu	(17)	295	1	304527
519	29.1	12.7	3.7	chr1	209585423	209585636	(39370786)	+	MIRb	SINE/MIR	2	237	(31)	309885
11	18.5	0.0	7.1	chr1	209585790	209585831	(39370591)	+	(GCGCCA)n	Simple_repeat	1	42	(0)	309886
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
15	18.4	2.1	4.2	chr1	211259610	211259656	(37696766)	+	(CGGCAG)n	Simple_repeat	1	48	(0)	312390
14	4.8	0.0	4.2	chr1	211259634	211259657	(37696765)	+	(CGG)n	Simple_repeat	1	24	(0)	312391
14911	13.6	3.6	2.6	chr1	211420280	211422138	(37534284)	+	Tigger4	DNA/TcMar-Tigger	5	1923	(808)	312663
17	25.8	3.9	2.5	chr1	211579416	211579494	(37376928)	+	(GGCGCGG)n	Simple_repeat	1	80	(0)	312977
708	27.1	9.3	1.8	chr1	212589183	212589520	(36366902)	+	HAL1ME	LINE/L1	2000	2365	(100)	314811
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
2280	10.9	2.2	2.2	chr1	214576016	214576370	(34380052)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	317923
11109	10.0	3.2	0.5	chr1	214576371	214577906	(34378516)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	317923
10741	11.8	7.0	1.9	chr1	215455834	215457565	(33498857)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	903	319092
857	19.2	7.5	0.0	chr1	215457561	215457721	(33498701)	C	Tigger4	DNA/TcMar-Tigger	(2557)	174	1	319093
1977	20.8	9.5	0.1	chr1	219045440	219045922	(29910500)	+	MER65-int	LTR/ERV1	5266	5764	(423)	324090
1294	15.5	4.9	1.5	chr1	219045923	219046294	(29910128)	+	LTR54	LTR/ERV1	50	501	(9)	324095
121	16.3	0.0	0.9	chr1	219941475	219941743	(29014679)	+	(CCTT)n	Simple_repeat	1	266	(0)	325358
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
15	23.4	2.8	5.4	chr1	220528499	220528570	(28427852)	+	(CCGCCTC)n	Simple_repeat	1	74	(0)	326372
13	18.4	0.0	0.0	chr1	220528630	220528660	(28427762)	+	(CTCCTC)n	Simple_repeat	1	31	(0)	326373
7574	12.5	17.5	1.9	chr1	223116166	223117491	(25838931)	C	LTR12C	LTR/ERV1	(0)	1579	3	330215
486	25.0	1.7	0.8	chr1	223134016	223134132	(25822290)	+	MIRb	SINE/MIR	55	172	(96)	330257
7353	20.0	7.3	1.5	chr1	223218870	223220070	(25736352)	+	MSTB1-int	LTR/ERVL-MaLR	350	1651	(0)	330411
12	9.2	0.0	4.0	chr1	223726557	223726581	(25229841)	+	(CCCT)n	Simple_repeat	1	25	(0)	331118
189	30.5	11.9	2.8	chr1	223727021	223727165	(25229257)	+	MamTip2	DNA/hAT-Tip100	67	226	(79)	331119
2799	20.1	10.2	2.0	chr1	224106414	224107053	(24849369)	C	LTR41	LTR/ERVL	(70)	698	1	331803
1267	21.0	1.9	2.5	chr1	225095656	225095975	(23860447)	+	L1ME1	LINE/L1	5987	6307	(44)	333565
1986	12.4	0.3	5.2	chr1	225095976	225096281	(23860141)	C	AluSz	SINE/Alu	(21)	291	1	333569
2140	24.2	8.4	1.8	chr1	225555934	225557216	(23399206)	C	L1ME3A	LINE/L1	(224)	5949	4561	334130
12	8.1	3.6	3.5	chr1	225652654	225652681	(23303741)	+	(CCCGC)n	Simple_repeat	1	29	(0)	334306
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
688	15.2	1.7	0.0	chr1	225777131	225777248	(23179174)	C	AluJb	SINE/Alu	(8)	304	185	334566
200	30.8	10.1	3.6	chr1	225777463	225777600	(23178822)	+	L2c	LINE/L2	3231	3378	(9)	334567
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
216	33.3	9.8	3.2	chr1	226110954	226111077	(22845345)	C	MIRb	SINE/MIR	(72)	196	64	335234
717	24.6	16.5	1.2	chr1	226111078	226111487	(22844935)	C	LTR82B	LTR/ERVL	(271)	559	21	335235
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
20	17.0	0.0	6.7	chr1	226870544	226870603	(22085819)	+	G-rich	Low_complexity	1	60	(0)	336618
16	16.4	5.0	4.8	chr1	226870678	226870737	(22085685)	+	(GGCCTGG)n	Simple_repeat	1	63	(0)	336619
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
14	12.7	0.0	0.0	chr1	227947529	227947554	(21008868)	+	(ACG)n	Simple_repeat	1	26	(0)	338087
18	27.2	1.2	4.8	chr1	227947679	227947760	(21008662)	+	(GCCCC)n	Simple_repeat	1	83	(0)	338088
2867	12.9	2.1	0.2	chr1	227995523	227995940	(20960482)	C	MSTC	LTR/ERVL-MaLR	(2)	426	1	338159
1526	15.2	5.0	0.4	chr1	228139511	228139774	(20816648)	C	AluJr	SINE/Alu	(35)	277	1	338351
947	21.2	8.8	1.2	chr1	228165156	228165386	(20791036)	+	L1MB3	LINE/L1	5824	6076	(107)	338374
6278	15.0	2.8	0.0	chr1	228500001	228501063	(20455359)	C	Tigger1	DNA/TcMar-Tigger	(1294)	1124	31	338818
1499	23.2	6.6	8.5	chr1	228501092	228501759	(20454663)	C	MER77B	LTR/ERVL	(6)	694	41	338819
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
16	20.3	0.0	2.4	chr1	230066975	230067016	(18889406)	+	(CCCCGC)n	Simple_repeat	1	42	(0)	341372
12	18.1	0.0	3.0	chr1	230067368	230067400	(18889022)	+	(GCGCCG)n	Simple_repeat	1	33	(0)	341373
20	20.9	4.4	5.3	chr1	230067416	230067506	(18888916)	+	(GCCCCCT)n	Simple_repeat	1	95	(0)	341374
2260	5.8	0.0	0.0	chr1	230222025	230222285	(18734137)	C	AluY	SINE/Alu	(10)	301	41	341568
489	24.0	11.0	1.7	chr1	230222721	230222934	(18733488)	C	MIRb	SINE/MIR	(8)	260	13	341569
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
13	13.2	6.1	0.0	chr1	231162937	231162969	(17793453)	+	(CAGCG)n	Simple_repeat	1	35	(0)	343023
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
193	32.0	13.8	0.0	chr1	231678502	231678657	(17277765)	C	MIR	SINE/MIR	(77)	185	5	343906
7765	7.9	12.6	4.1	chr1	232099576	232100728	(16855694)	C	MER11A	LTR/ERVK	(0)	1266	1	344516
22	7.9	2.3	4.4	chr1	232630076	232630119	(16326303)	+	(CTC)n	Simple_repeat	1	45	(0)	345178
17	9.3	2.8	2.7	chr1	232630156	232630191	(16326231)	+	(CCGC)n	Simple_repeat	1	37	(0)	345179
13	13.1	4.1	7.8	chr1	233328323	233328376	(15628046)	+	(CCGC)n	Simple_repeat	1	51	(0)	346215
12	25.8	3.1	4.5	chr1	233328482	233328546	(15627876)	+	(GCGGCGC)n	Simple_repeat	1	67	(0)	346216
15	10.1	9.4	0.0	chr1	233328690	233328721	(15627701)	+	(CG)n	Simple_repeat	1	35	(0)	346217
59	3.5	0.0	0.0	chr1	233904440	233904498	(15051924)	+	(AG)n	Simple_repeat	1	59	(0)	347066
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
12	11.6	3.3	3.2	chr1	233904670	233904699	(15051723)	+	(CGACC)n	Simple_repeat	1	31	(0)	347068
928	16.7	0.0	2.5	chr1	234373076	234373237	(14583185)	+	AluJr	SINE/Alu	145	302	(10)	347762
692	30.9	10.8	6.2	chr1	234675975	234676570	(14279852)	+	L1ME3A	LINE/L1	143	769	(5727)	348265
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
1867	16.9	1.7	0.7	chr1	235275855	235276149	(13680273)	+	AluJb	SINE/Alu	1	298	(14)	349376
16	0.0	0.0	0.0	chr1	235276191	235276207	(13680215)	+	(A)n	Simple_repeat	1	17	(0)	349377
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
341	33.8	2.7	1.4	chr1	236604804	236604947	(12351475)	+	MIRb	SINE/MIR	8	153	(115)	351934
1937	9.6	4.4	0.0	chr1	236605121	236605380	(12351042)	+	AluSx1	SINE/Alu	21	292	(20)	351935
414	21.1	17.2	2.0	chr1	236643949	236644100	(12312322)	+	AluSx	SINE/Alu	120	299	(13)	352012
2077	10.2	0.0	0.7	chr1	238516575	238516848	(10439574)	+	AluY	SINE/Alu	38	309	(2)	354807
3963	20.2	3.3	2.6	chr1	238516849	238517006	(10439416)	+	LTR8B	LTR/ERV1	649	812	(8)	354806
23	12.3	2.2	2.1	chr1	239386589	239386634	(9569788)	+	GA-rich	Low_complexity	1	47	(0)	356035
17	26.6	4.7	4.5	chr1	239386846	239386952	(9569470)	+	(GGCCGC)n	Simple_repeat	1	112	(0)	356036
7054	22.5	4.6	2.2	chr1	241445035	241446721	(7509701)	+	MLT1A1-int	LTR/ERVL-MaLR	8	1735	(0)	359299
30	24.1	0.9	4.7	chr1	241639705	241639834	(7316588)	+	(GGCGG)n	Simple_repeat	1	125	(0)	359585
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
17856	15.6	2.1	2.2	chr1	243580042	243583170	(5373252)	+	L1PA16	LINE/L1	4	3145	(3704)	362779
1225	23.8	5.4	2.0	chr1	244171622	244171926	(4784496)	C	UCON31	Unknown	(106)	348	33	363686
17	15.9	6.8	0.0	chr1	244461078	244461121	(4495301)	+	(TTTC)n	Simple_repeat	1	47	(0)	364217
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
1923	16.7	0.7	0.0	chr1	244696341	244696610	(4259812)	+	AluJb	SINE/Alu	2	273	(39)	364576
399	18.0	6.3	3.3	chr1	244696611	244696660	(4259762)	C	L1MC5	LINE/L1	(900)	8404	8349	364573
3037	18.3	4.8	1.5	chr1	244696661	244697204	(4259218)	+	MER68	LTR/ERVL	1	563	(0)	364577
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
334	26.7	10.3	2.0	chr1	246507473	246507667	(2448755)	C	L1ME2z	LINE/L1	(0)	6444	6232	367609
2085	14.6	0.7	0.0	chr1	246786142	246786436	(2169986)	+	AluJb	SINE/Alu	2	298	(14)	368091
8798	3.3	24.6	0.0	chr1	248944224	248945548	(10874)	+	TAR1	Satellite/telo	314	2069	(42)	371028
676	4.0	0.7	3.4	chr1	248945549	248946422	(10000)	+	(AGGGTT)n	Simple_repeat	1	880	(0)	371029
665	35.9	10.5	4.6	chr10	767215	767866	(133029556)	+	L1MEc	LINE/L1	16	710	(5690)	371824
1436	25.2	9.7	2.8	chr10	767883	768563	(133028859)	+	L1MEc	LINE/L1	748	1480	(4920)	371824
926	29.1	7.4	7.9	chr10	5943852	5944520	(127852902)	+	PABL_B	LTR/ERV1	1	665	(2)	378602
495	23.5	4.8	1.6	chr10	8349998	8350118	(125447304)	C	UCON26	Unknown	(0)	343	219	382579
24	22.5	3.7	2.4	chr10	14604285	14604365	(119193057)	+	(CGG)n	Simple_repeat	1	84	(0)	392730
83	28.9	1.2	0.8	chr10	14604707	14604958	(119192464)	+	(CT)n	Simple_repeat	1	255	(0)	392731
413	21.7	7.1	0.0	chr10	14692604	14692695	(119104727)	+	MER94	DNA/hAT-Blackjack	35	133	(1)	392898
77	25.2	3.3	6.1	chr10	15168719	15169113	(118628309)	+	(CGCCC)n	Simple_repeat	1	408	(0)	393755
522	30.5	9.2	1.0	chr10	16806382	16806580	(116990842)	+	MIRb	SINE/MIR	27	243	(25)	396410
6480	18.5	1.0	0.1	chr10	16822215	16823330	(116974092)	+	MSTB-int	LTR/ERVL-MaLR	1	1126	(525)	396435
434	32.3	7.0	0.5	chr10	17235427	17235625	(116561797)	C	MIRb	SINE/MIR	(30)	238	26	397009
4855	10.6	2.5	1.5	chr10	17263289	17264303	(116533119)	C	MER11A	LTR/ERVK	(0)	1266	1	397063
46	0.0	0.0	0.0	chr10	17264343	17264384	(116533038)	+	(T)n	Simple_repeat	1	42	(0)	397064
26259	3.3	0.2	0.1	chr10	18627419	18633448	(115163974)	+	L1PA3	LINE/L1	145	6155	(0)	399395
2827	18.3	2.1	0.8	chr10	20333728	20334240	(113463182)	+	MLT2B1	LTR/ERVL	1	520	(0)	401935
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
13	14.1	0.0	5.7	chr10	21526051	21526085	(112271337)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	403870
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
18	13.2	0.0	0.0	chr10	21526217	21526249	(112271173)	+	(GGGAG)n	Simple_repeat	1	33	(0)	403872
14	11.7	2.3	6.8	chr10	22340648	22340690	(111456732)	+	G-rich	Low_complexity	1	44	(0)	405128
11168	10.1	1.3	2.5	chr10	22908111	22909710	(110887712)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	405977
192	18.8	0.0	7.7	chr10	22928297	22928348	(110869074)	C	MIR3	SINE/MIR	(60)	148	101	406000
972	33.1	4.4	2.7	chr10	23140187	23140922	(110656500)	C	L2	LINE/L2	(650)	2769	2021	406326
463	24.6	4.1	2.0	chr10	23140991	23141186	(110656236)	+	L1ME4a	LINE/L1	5266	5471	(683)	406333
13	17.6	0.0	6.8	chr10	23198891	23198934	(110598488)	+	(AGGCGG)n	Simple_repeat	1	44	(0)	406431
48	23.9	4.2	4.7	chr10	23344117	23344368	(110453054)	+	G-rich	Low_complexity	1	250	(0)	406652
13185	12.4	3.4	1.5	chr10	23640560	23642649	(110154773)	+	Tigger4	DNA/TcMar-Tigger	564	2694	(37)	407245
79	19.2	0.0	0.0	chr10	28842822	28842965	(104954457)	+	(TA)n	Simple_repeat	1	144	(0)	415849
12	8.4	0.0	6.9	chr10	31031928	31031956	(102765466)	+	(GCCCC)n	Simple_repeat	1	29	(0)	419722
420	17.9	1.3	0.0	chr10	32210704	32210792	(101586630)	+	FRAM	SINE/Alu	1	90	(43)	421559
446	27.8	1.6	0.8	chr10	32210793	32210919	(101586503)	C	MER5A1	DNA/hAT-Charlie	(30)	136	9	421560
4652	24.2	7.6	4.4	chr10	35268369	35269269	(98528153)	C	MLT-int	LTR/ERVL-MaLR	(336)	1399	417	426311
12	3.9	11.1	0.0	chr10	35642053	35642079	(98155343)	+	(CGTC)n	Simple_repeat	1	30	(0)	426870
2117	13.1	16.4	0.2	chr10	37823987	37824444	(95972978)	C	MLT2B4	LTR/ERVL	(9)	547	1	430099
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
701	18.1	4.8	0.0	chr10	43304494	43304631	(90492791)	C	HERVK22-int	LTR/ERVK	(4366)	2471	2327	433213
31	0.0	0.0	2.9	chr10	43396888	43396921	(90400501)	+	(GGGAG)n	Simple_repeat	1	34	(0)	433409
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
1090	9.3	1.9	2.5	chr10	43420119	43420280	(90377142)	C	AluJb	SINE/Alu	(8)	304	144	433466
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
15659	14.6	4.1	1.2	chr10	48336815	48340545	(85456877)	+	L1PA17	LINE/L1	2318	6152	(14)	440429
2074	28.6	7.2	1.8	chr10	59840470	59841388	(73956034)	+	L2a	LINE/L2	2254	3242	(184)	456172
1853	22.8	8.4	5.0	chr10	59841482	59841662	(73955760)	C	L1ME3B	LINE/L1	(1875)	4271	4086	456170
2555	7.9	1.0	0.0	chr10	59841663	59841965	(73955457)	C	AluY	SINE/Alu	(5)	306	1	456173
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
11	22.5	3.5	5.1	chr10	63521661	63521717	(70275705)	+	(GGCCTG)n	Simple_repeat	1	59	(0)	461938
29	22.2	5.7	3.8	chr10	63521784	63521907	(70275515)	+	(GCG)n	Simple_repeat	1	131	(0)	461939
15772	13.7	2.6	3.8	chr10	66702765	66704788	(67092634)	C	Tigger4	DNA/TcMar-Tigger	(714)	2017	1	466470
204	31.0	12.8	0.8	chr10	67883880	67883996	(65913426)	C	MIR3	SINE/MIR	(46)	162	30	468130
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
1294	22.4	10.2	1.4	chr10	67959928	67960345	(65837077)	+	MER77	LTR/ERVL	1	486	(118)	468268
3746	13.1	1.7	7.5	chr10	68093787	68094269	(65703153)	C	MER41B	LTR/ERV1	(125)	509	69	468500
17	0.0	4.8	0.0	chr10	68595587	68595607	(65201815)	+	(CA)n	Simple_repeat	1	22	(0)	469632
2039	14.4	0.3	0.3	chr10	68595610	68595914	(65201508)	C	AluSg	SINE/Alu	(5)	305	1	469633
303	24.7	0.9	16.4	chr10	68827043	68827142	(64970280)	C	MIR3	SINE/MIR	(174)	94	3	470234
903	6.5	0.0	0.8	chr10	69408482	69408605	(64388817)	C	AluJo	SINE/Alu	(188)	124	2	471533
18	0.0	0.0	3.7	chr10	69802377	69802403	(63995019)	+	(TTTA)n	Simple_repeat	1	27	(0)	472289
24	15.6	5.9	2.8	chr10	71212860	71212927	(62584495)	+	(GGC)n	Simple_repeat	1	72	(0)	474802
19	15.1	0.0	0.0	chr10	72297844	72297880	(61499542)	+	(TCCGCC)n	Simple_repeat	1	37	(0)	476990
20	12.6	2.9	0.0	chr10	73096009	73096043	(60701379)	+	GA-rich	Low_complexity	1	36	(0)	478601
2093	14.2	0.3	0.0	chr10	74540464	74540758	(59256664)	C	AluSz6	SINE/Alu	(16)	296	1	481359
207	29.1	3.5	0.0	chr10	74540832	74540886	(59256536)	+	MIRc	SINE/MIR	16	72	(196)	481360
23448	9.6	1.0	3.8	chr10	75575580	75581586	(58215836)	+	L1P2	LINE/L1	11	5977	(492)	483313
193	29.9	3.4	8.3	chr10	76103253	76103409	(57694013)	+	L3	LINE/CR1	3853	4001	(98)	484063
219	36.8	2.2	0.0	chr10	77102879	77102965	(56694457)	+	L2b	LINE/L2	3247	3335	(40)	485350
2187	24.1	3.1	0.5	chr10	78260065	78260626	(55536796)	C	LTR80B	LTR/ERVL	(6)	578	2	487481
14	4.3	0.0	7.1	chr10	78665590	78665617	(55131805)	+	(TTTC)n	Simple_repeat	1	28	(0)	488232
371	32.4	16.7	1.5	chr10	78961462	78962142	(54835280)	C	L2a	LINE/L2	(0)	3426	2605	488782
22	20.9	4.8	5.5	chr10	79242947	79243050	(54554372)	+	G-rich	Low_complexity	1	109	(0)	489320
17	11.2	2.3	6.7	chr10	79243084	79243127	(54554295)	+	(TCC)n	Simple_repeat	1	45	(0)	489321
15	16.1	2.9	0.0	chr10	79243263	79243297	(54554125)	+	(CGCCCC)n	Simple_repeat	1	36	(0)	489322
9417	15.1	2.6	0.1	chr10	81230669	81232247	(52565175)	+	Tigger4	DNA/TcMar-Tigger	292	1911	(820)	492337
9974	14.8	1.9	0.9	chr10	82909334	82910958	(50886464)	+	Tigger4	DNA/TcMar-Tigger	1	1642	(1089)	494679
2262	11.4	0.0	1.0	chr10	83513123	83513429	(50283993)	+	AluSz	SINE/Alu	1	304	(8)	495478
14757	15.2	2.9	5.4	chr10	83513430	83514809	(50282613)	+	Tigger4	DNA/TcMar-Tigger	765	2080	(651)	495477
390	21.6	5.4	0.0	chr10	83604719	83604806	(50192616)	+	MER3	DNA/hAT-Charlie	117	209	(0)	495615
375	27.3	8.1	3.4	chr10	83604822	83605019	(50192403)	+	MIRb	SINE/MIR	15	226	(42)	495616
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
961	23.1	6.0	0.8	chr10	86377574	86377809	(47419613)	C	MIR	SINE/MIR	(3)	259	11	499386
17	17.1	4.7	3.6	chr10	86756475	86756529	(47040893)	+	G-rich	Low_complexity	1	55	(0)	500080
17	16.1	2.3	2.2	chr10	86756568	86756611	(47040811)	+	(CCCGCC)n	Simple_repeat	1	45	(0)	500081
13	13.1	0.0	0.0	chr10	86756625	86756649	(47040773)	+	(CGG)n	Simple_repeat	1	25	(0)	500082
16	3.5	0.0	10.8	chr10	86756682	86756718	(47040704)	+	(AGG)n	Simple_repeat	1	37	(0)	500083
21	33.0	1.4	0.0	chr10	86960651	86960723	(46836699)	+	(TG)n	Simple_repeat	1	74	(0)	500476
332	25.6	18.4	1.8	chr10	86960831	86960997	(46836425)	C	MIR	SINE/MIR	(37)	225	25	500477
4598	24.8	5.7	2.6	chr10	87886977	87888294	(45909128)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	501962
10873	15.0	3.1	2.9	chr10	88845944	88847255	(44950167)	C	Tigger4	DNA/TcMar-Tigger	(830)	1901	561	503448
5321	28.3	2.1	1.5	chr10	89692609	89694367	(44103055)	C	Tigger4	DNA/TcMar-Tigger	(601)	2130	360	504826
33	5.0	4.4	4.2	chr10	90858056	90858123	(42939299)	+	(CCG)n	Simple_repeat	1	71	(0)	506428
22	25.9	6.1	2.5	chr10	91220482	91220596	(42576826)	+	(GGC)n	Simple_repeat	1	122	(0)	506997
26369	4.9	0.9	0.9	chr10	94159623	94165478	(39631944)	C	L1PA4	LINE/L1	(3)	6152	297	512477
1769	10.4	0.4	0.8	chr10	95184450	95184698	(38612724)	+	AluSx	SINE/Alu	49	296	(16)	513858
498	26.4	6.6	7.8	chr10	96090395	96090605	(37706817)	C	MIRb	SINE/MIR	(28)	240	37	515390
2365	11.9	0.0	0.0	chr10	97406924	97407235	(36390187)	+	AluSx	SINE/Alu	1	312	(0)	517913
224	27.9	12.7	1.0	chr10	97687725	97687820	(36109602)	+	MIR	SINE/MIR	5	114	(154)	518502
1274	11.8	2.0	1.0	chr10	99172034	99172229	(34625193)	C	L1PA16	LINE/L1	(9)	6157	5960	521032
384	31.8	15.3	2.3	chr10	99172473	99172631	(34624791)	C	L2c	LINE/L2	(22)	3365	3186	521033
587	26.6	7.0	4.2	chr10	100346054	100346305	(33451117)	+	MIR	SINE/MIR	6	268	(0)	523191
34	0.0	0.0	0.0	chr10	101830682	101830710	(31966712)	+	(CA)n	Simple_repeat	1	29	(0)	525757
12	10.8	6.7	0.0	chr10	101830872	101830901	(31966521)	+	(GCACAT)n	Simple_repeat	1	32	(0)	525758
12	23.3	2.0	4.0	chr10	102133208	102133256	(31664166)	+	(GCGGCAG)n	Simple_repeat	1	50	(0)	526366
17	14.1	5.5	7.8	chr10	102408735	102408807	(31388615)	+	(TGCCC)n	Simple_repeat	1	77	(0)	526865
17	21.8	5.8	4.3	chr10	102409098	102409184	(31388238)	+	(CCCGGCC)n	Simple_repeat	1	92	(0)	526866
14	0.0	0.0	0.0	chr10	102409249	102409266	(31388156)	+	(GCG)n	Simple_repeat	1	18	(0)	526867
12	11.5	3.3	3.2	chr10	102450877	102450906	(31346516)	+	(GCGGC)n	Simple_repeat	1	31	(0)	526950
15	20.3	5.9	0.0	chr10	103368447	103368497	(30428925)	+	(CCTCGGCC)n	Simple_repeat	1	54	(0)	528834
16	19.6	6.7	1.6	chr10	103555148	103555228	(30242194)	+	(GTGCTGC)n	Simple_repeat	1	85	(0)	529199
14	17.1	3.0	0.0	chr10	103555279	103555311	(30242111)	+	GA-rich	Low_complexity	1	34	(0)	529200
30	13.7	2.5	6.0	chr10	103693192	103693272	(30104150)	+	(CCGC)n	Simple_repeat	1	83	(0)	529445
28	0.0	2.9	2.8	chr10	103693285	103693319	(30104103)	+	(CCCGC)n	Simple_repeat	1	36	(0)	529446
371	33.3	8.6	1.8	chr10	104835834	104836059	(28961363)	C	MIRc	SINE/MIR	(7)	261	19	531365
606	25.0	3.6	0.0	chr10	110391377	110391536	(23405886)	+	L1MC4a	LINE/L1	5726	5891	(1991)	539399
28	0.0	0.0	0.0	chr10	110391542	110391568	(23405854)	+	(T)n	Simple_repeat	1	27	(0)	539400
245	33.3	1.2	0.0	chr10	110857347	110857427	(22939995)	C	MIR1_Amn	SINE/MIR	(73)	157	76	540279
2458	19.0	12.9	0.8	chr10	112578790	112579419	(21218003)	+	Kanga1a	DNA/TcMar-Tc2	1	718	(36)	542884
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
2159	12.0	3.5	0.0	chr10	113298837	113299137	(20498285)	+	AluSz6	SINE/Alu	1	312	(0)	544083
634	23.3	5.2	3.5	chr10	113299138	113299225	(20498197)	C	MER45A	DNA/hAT-Tip100	(77)	101	6	544082
894	27.4	10.6	5.4	chr10	113363451	113363951	(20433471)	+	MLT1H	LTR/ERVL-MaLR	17	546	(3)	544192
1498	17.4	0.0	5.6	chr10	116120327	116120614	(17676808)	+	AluJr	SINE/Alu	39	310	(2)	548313
339	31.1	8.0	8.5	chr10	116120615	116121129	(17676293)	+	MamGypLTR3	LTR/Gypsy	436	946	(35)	548312
13	21.4	4.7	0.0	chr10	117168765	117168807	(16628615)	+	(CCCCACG)n	Simple_repeat	1	45	(0)	549985
294	30.6	8.1	2.6	chr10	117169063	117169213	(16628209)	C	MIRb	SINE/MIR	(78)	190	31	549986
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
193	18.6	18.9	1.1	chr10	118047180	118047266	(15750156)	+	L2b	LINE/L2	3266	3371	(4)	551478
16	13.3	2.1	6.2	chr10	119651217	119651263	(14146159)	+	(CCGCGC)n	Simple_repeat	1	48	(0)	554324
12	18.1	6.3	6.0	chr10	119872594	119872656	(13924766)	+	(GGCC)n	Simple_repeat	1	67	(0)	554723
1862	21.8	14.5	5.7	chr10	120221934	120222620	(13574802)	+	LTR41	LTR/ERVL	8	765	(3)	555312
553	24.3	9.3	0.0	chr10	120942677	120942812	(12854610)	C	MER5A	DNA/hAT-Charlie	(32)	157	8	556399
236	24.7	5.2	0.0	chr10	120942858	120942930	(12854492)	+	MIR3	SINE/MIR	64	140	(68)	556400
471	32.4	8.4	0.5	chr10	120979163	120979348	(12818074)	+	MIRb	SINE/MIR	67	268	(0)	556458
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
15	4.1	4.0	0.0	chr10	120979824	120979848	(12817574)	+	(CCCGC)n	Simple_repeat	1	26	(0)	556460
6918	24.1	4.8	2.8	chr10	121228044	121229741	(12567681)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	556832
29	25.2	0.9	5.4	chr10	121598376	121598485	(12198937)	+	(GCC)n	Simple_repeat	1	111	(0)	557380
868	15.7	0.0	0.0	chr10	124461440	124461573	(9335849)	C	FLAM_C	SINE/Alu	(8)	135	2	561976
16	15.4	2.8	0.0	chr10	124461792	124461827	(9335595)	+	(GCGCCG)n	Simple_repeat	1	37	(0)	561977
19	10.4	4.7	2.2	chr10	124462052	124462094	(9335328)	+	G-rich	Low_complexity	1	45	(0)	561978
507	25.8	1.1	9.0	chr10	124462197	124462312	(9335110)	+	MER33	DNA/hAT-Charlie	1	118	(206)	561979
14	16.6	2.2	6.4	chr10	124744221	124744266	(9053156)	+	(GCC)n	Simple_repeat	1	47	(0)	562380
22	13.7	6.2	5.8	chr10	124744309	124744315	(9053107)	+	(GGCGGCA)n	Simple_repeat	1	18	(68)	562381
25	2.3	1.9	9.3	chr10	124744316	124744368	(9053054)	+	(GGC)n	Simple_repeat	1	54	(0)	562382
22	13.7	6.2	5.8	chr10	124744369	124744389	(9053033)	+	(GGCGGCA)n	Simple_repeat	19	86	(0)	562381
22	22.4	5.0	3.8	chr10	124744458	124744557	(9052865)	+	(GCCGCGC)n	Simple_repeat	1	105	(0)	562383
197	35.8	1.6	10.1	chr10	125448333	125448668	(8348754)	+	L2b	LINE/L2	3000	3306	(69)	563535
342	22.1	20.3	1.4	chr10	125448752	125448898	(8348524)	+	LTR50	LTR/ERVL	82	263	(532)	563536
66	13.2	0.0	0.0	chr10	125448924	125449031	(8348391)	+	(TTCTT)n	Simple_repeat	1	108	(0)	563537
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
487	26.3	14.3	3.1	chr10	126161247	126161438	(7635984)	C	MIR	SINE/MIR	(36)	226	10	564502
25	23.4	2.2	4.3	chr10	127196574	127196665	(6600757)	+	G-rich	Low_complexity	1	94	(0)	565885
24	5.8	0.0	2.6	chr10	127196711	127196748	(6600674)	+	(GGA)n	Simple_repeat	1	38	(0)	565886
338	28.8	2.3	0.8	chr10	132331499	132331624	(1465798)	C	LTR16E1	LTR/ERVL	(3)	535	408	571544
14	19.7	1.9	5.7	chr10	132537401	132537452	(1259970)	+	G-rich	Low_complexity	1	53	(0)	571754
603	21.3	0.0	0.9	chr10	132705549	132705657	(1091765)	+	L1MC2	LINE/L1	6236	6343	(1)	571916
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
37	26.7	3.7	5.3	chr11	926095	926311	(134160311)	+	G-rich	Low_complexity	1	225	(0)	574111
15	30.9	0.0	5.1	chr11	3423415	3423493	(131663129)	+	G-rich	Low_complexity	1	79	(0)	577001
9560	16.6	1.5	1.2	chr11	4461474	4464244	(130622378)	+	HERVIP10B3-int	LTR/ERV1	4780	7603	(0)	578836
4243	25.9	11.4	9.2	chr11	4466036	4467065	(130619557)	+	MSTC-int	LTR/ERVL-MaLR	701	1733	(2)	578841
3594	14.6	3.1	1.0	chr11	4625373	4626429	(130460193)	C	HUERS-P3b-int	LTR/ERV1	(5394)	2024	742	578994
961	20.4	0.5	6.5	chr11	4626464	4626662	(130459960)	C	HUERS-P3b-int	LTR/ERV1	(6885)	533	347	578994
2687	14.2	6.9	5.3	chr11	4626663	4627200	(130459422)	C	LTR9	LTR/ERV1	(30)	582	1	578997
14	22.8	3.8	1.8	chr11	6390309	6390361	(128696261)	+	G-rich	Low_complexity	1	55	(0)	581255
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
187	25.1	10.1	4.0	chr11	8202967	8203100	(126883522)	+	MIRc	SINE/MIR	48	193	(15)	583653
6864	7.9	17.7	0.5	chr11	9451739	9452785	(125633837)	C	MER11A	LTR/ERVK	(0)	1266	1	585830
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
17	10.1	3.1	0.0	chr11	14435366	14435397	(120651225)	+	(AAAT)n	Simple_repeat	1	33	(0)	593938
572	24.8	0.7	2.8	chr11	14435398	14435538	(120651084)	+	LTR40a	LTR/ERVL	91	228	(291)	593933
361	25.7	14.6	5.0	chr11	14436123	14436290	(120650332)	C	L1ME4a	LINE/L1	(0)	6124	5977	593939
224	29.0	10.3	1.5	chr11	14891180	14891312	(120195310)	+	MIR	SINE/MIR	95	240	(22)	594636
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
12	20.8	6.8	0.0	chr11	14891919	14891962	(120194660)	+	(GGCCC)n	Simple_repeat	1	47	(0)	594638
18	15.5	0.0	0.0	chr11	14905753	14905782	(120180840)	+	(GT)n	Simple_repeat	1	30	(0)	594661
13	25.9	1.9	1.9	chr11	15075133	15075184	(120011438)	+	(GGAGCA)n	Simple_repeat	1	53	(0)	594898
14	8.3	0.0	3.6	chr11	27472006	27472033	(107614589)	+	(GGGCG)n	Simple_repeat	1	28	(0)	613998
12	16.5	5.9	0.0	chr11	32892771	32892804	(102193818)	+	(GGCGG)n	Simple_repeat	1	36	(0)	622439
2496	7.2	0.3	0.0	chr11	33015348	33015654	(102070968)	C	AluSx1	SINE/Alu	(4)	308	1	622658
19	24.2	1.5	2.9	chr11	33016057	33016123	(102070499)	+	(GGCGTGC)n	Simple_repeat	1	68	(0)	622659
12	35.1	1.4	1.4	chr11	35663487	35663556	(99423066)	+	GA-rich	Low_complexity	1	71	(0)	627135
2481	12.9	0.5	0.8	chr11	38291377	38291752	(96794870)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	630998
254	31.7	9.9	4.6	chr11	46236930	46237167	(88849455)	C	L2a	LINE/L2	(212)	3163	2912	643566
287	25.7	6.3	13.9	chr11	46237228	46237435	(88849187)	C	L2b	LINE/L2	(181)	3194	3004	643568
15	27.4	1.4	4.2	chr11	46936912	46936982	(88149640)	+	G-rich	Low_complexity	1	72	(0)	644940
705	25.1	5.0	5.0	chr11	46937195	46937416	(88149206)	C	MIRb	SINE/MIR	(8)	260	39	644941
566	25.4	2.3	3.6	chr11	47400745	47400965	(87685657)	+	L1M5	LINE/L1	5255	5472	(771)	645825
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
16	18.4	8.4	2.6	chr11	47553221	47553291	(87533331)	+	(GCGCCGA)n	Simple_repeat	1	77	(0)	646146
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
17	20.9	2.7	6.5	chr11	47642561	47642635	(87443987)	+	(GCCC)n	Simple_repeat	1	77	(0)	646354
1196	15.2	0.6	0.5	chr11	55059133	55079173	(80007449)	C	ALR/Alpha	Satellite/centr	(50)	20061	1	650761
268	22.3	8.8	0.0	chr11	59548930	59549032	(75537590)	+	L1MC4a	LINE/L1	5315	5427	(2455)	656941
799	14.2	1.6	0.0	chr11	59549189	59549308	(75537314)	C	AluJo	SINE/Alu	(190)	122	1	656942
384	26.0	9.3	0.7	chr11	59549351	59549497	(75537125)	+	MIR	SINE/MIR	45	205	(57)	656943
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
18	0.0	0.0	0.0	chr11	59669587	59669606	(75417016)	+	(T)n	Simple_repeat	1	20	(0)	657195
4651	18.4	1.7	0.1	chr11	62115609	62116496	(72970126)	C	Cheshire	DNA/hAT-Charlie	(612)	1808	907	661529
1275	20.2	12.4	3.9	chr11	62116497	62116878	(72969744)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	49	661533
19	21.2	0.0	0.0	chr11	62706371	62706414	(72380208)	+	G-rich	Low_complexity	1	44	(0)	662620
2896	7.6	6.2	0.5	chr11	63471818	63472215	(71614407)	+	L1PA11	LINE/L1	5753	6174	(0)	663728
226	25.3	24.6	0.0	chr11	63472325	63472407	(71614215)	C	L1M4a2	LINE/L1	(305)	5873	5764	663729
1504	21.5	10.9	1.9	chr11	63472405	63472822	(71613800)	C	L1M4a2	LINE/L1	(1434)	4712	4253	663729
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
16	23.5	0.0	0.0	chr11	63682323	63682357	(71404265)	+	(T)n	Simple_repeat	1	35	(0)	664164
13	14.2	3.2	0.0	chr11	65662664	65662694	(69423928)	+	(CCCCG)n	Simple_repeat	1	32	(0)	667910
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
15	26.1	3.3	1.6	chr11	66070186	66070246	(69016376)	+	(GCCGG)n	Simple_repeat	1	63	(0)	668764
16	7.5	3.6	0.0	chr11	66070396	66070423	(69016199)	+	(GCC)n	Simple_repeat	1	29	(0)	668765
28	11.9	0.0	0.0	chr11	66070574	66070619	(69016003)	+	(CAG)n	Simple_repeat	1	46	(0)	668766
18	33.3	0.0	0.0	chr11	66070644	66070711	(69015911)	+	(CCT)n	Simple_repeat	1	68	(0)	668767
299	24.1	2.5	0.0	chr11	66480762	66480844	(68605778)	+	MIRc	SINE/MIR	63	150	(80)	669606
13	21.9	0.0	2.6	chr11	67955893	67955931	(67130691)	+	(GCCTG)n	Simple_repeat	1	39	(0)	672521
16	23.4	1.4	6.7	chr11	68841685	68841758	(66244864)	+	(CCCCGCG)n	Simple_repeat	1	75	(0)	674057
28	8.1	0.0	0.0	chr11	68841793	68841832	(66244790)	+	(GCG)n	Simple_repeat	1	40	(0)	674058
18	21.8	1.8	4.5	chr11	68841959	68842026	(66244596)	+	G-rich	Low_complexity	1	66	(0)	674059
272	23.9	10.1	1.6	chr11	68842029	68842181	(66244441)	+	MIR3	SINE/MIR	37	231	(37)	674060
338	31.6	1.7	1.7	chr11	68864196	68864314	(66222308)	C	MIRb	SINE/MIR	(116)	152	34	674114
375	35.4	4.5	0.5	chr11	68864322	68864514	(66222108)	+	MER113A	DNA/hAT-Charlie	9	209	(105)	674115
513	30.1	4.0	0.0	chr11	68903371	68903536	(66183086)	+	MIR	SINE/MIR	13	185	(77)	674190
267	31.9	0.0	0.0	chr11	68903540	68903611	(66183011)	C	MIRb	SINE/MIR	(180)	88	17	674191
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
684	28.4	15.1	2.7	chr11	71388680	71389293	(63697329)	+	L2a	LINE/L2	2723	3422	(4)	678178
1559	23.5	8.5	1.1	chr11	71971391	71971903	(63114719)	+	L1M5	LINE/L1	5051	5625	(569)	679095
1384	20.2	6.7	1.4	chr11	71971899	71972250	(63114372)	+	L1ME5	LINE/L1	5665	6036	(158)	679097
2245	11.9	11.5	1.3	chr11	72912857	72913238	(62173384)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	680837
6905	21.4	3.0	9.4	chr11	72913239	72913270	(62173352)	C	L1MA3	LINE/L1	(2720)	3426	3404	680833
2111	15.1	0.0	0.0	chr11	72913271	72913568	(62173054)	C	AluSz6	SINE/Alu	(14)	298	1	680838
15	11.8	8.1	0.0	chr11	73141921	73141957	(61944665)	+	GA-rich	Low_complexity	1	40	(0)	681262
206	25.9	13.8	1.2	chr11	73788257	73788338	(61298284)	+	MIR3	SINE/MIR	15	108	(100)	682676
16	11.6	2.4	4.8	chr11	73982881	73982921	(61103701)	+	G-rich	Low_complexity	1	42	(0)	683165
2156	11.1	0.3	0.0	chr11	75384108	75384414	(59702208)	C	AluSz	SINE/Alu	(4)	308	1	685945
1090	17.8	2.9	7.6	chr11	75384415	75384479	(59702143)	+	MER33	DNA/hAT-Charlie	247	299	(25)	685943
205	30.5	7.9	0.0	chr11	78188432	78188513	(56898109)	C	MIRc	SINE/MIR	(106)	162	74	691567
1895	15.9	0.7	0.3	chr11	78514127	78514421	(56572201)	C	AluJb	SINE/Alu	(16)	296	1	692176
1644	21.3	7.9	1.5	chr11	78514422	78514460	(56572162)	+	MSTA	LTR/ERVL-MaLR	395	428	(0)	692175
328	36.2	8.8	2.1	chr11	78514906	78515111	(56571511)	+	HAL1	LINE/L1	9	243	(2222)	692177
16	13.2	0.0	0.0	chr11	86245010	86245034	(48841588)	+	(CG)n	Simple_repeat	1	25	(0)	705223
15	26.8	3.3	1.6	chr11	86245077	86245136	(48841486)	+	(CGG)n	Simple_repeat	1	62	(0)	705224
568	35.8	7.8	3.0	chr11	90290814	90291407	(44795215)	C	L2c	LINE/L2	(940)	2479	1855	711248
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
16	23.0	3.9	0.0	chr11	95089758	95089808	(39996814)	+	(CCCGC)n	Simple_repeat	1	53	(0)	718109
18	16.8	0.0	2.4	chr11	95090163	95090204	(39996418)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	718110
16678	12.8	2.9	1.6	chr11	95474097	95476792	(39609830)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	1	718685
1288	20.5	0.4	0.0	chr11	96281670	96281898	(38804724)	+	AluJb	SINE/Alu	83	312	(0)	719910
5125	23.0	6.8	3.3	chr11	96399324	96400550	(38686072)	+	MSTD-int	LTR/ERVL-MaLR	464	1735	(0)	720083
2096	18.0	3.8	2.8	chr11	97850746	97851280	(37235342)	+	MLT2A2	LTR/ERVL	3	554	(0)	721714
2403	9.5	0.0	0.0	chr11	100681963	100682266	(34404356)	+	AluSq2	SINE/Alu	1	304	(9)	725353
289	34.6	1.6	16.7	chr11	100682267	100682345	(34404277)	+	MIRb	SINE/MIR	144	210	(58)	725352
889	13.3	0.0	0.0	chr11	100682683	100682802	(34403820)	+	FLAM_C	SINE/Alu	7	126	(17)	725354
12	12.6	3.7	0.0	chr11	102111432	102111458	(32975164)	+	(TTCC)n	Simple_repeat	1	28	(0)	727407
12	16.8	0.0	5.4	chr11	107591030	107591066	(27495556)	+	(CCGCGC)n	Simple_repeat	1	37	(0)	735149
14	17.5	2.4	2.4	chr11	107591296	107591336	(27495286)	+	(GAGCGCG)n	Simple_repeat	1	42	(0)	735150
9275	13.8	2.5	1.2	chr11	109791092	109792613	(25294009)	+	Tigger4	DNA/TcMar-Tigger	2	1543	(1188)	738802
17	23.7	0.0	3.7	chr11	115504293	115504358	(19582264)	+	(CAGCCG)n	Simple_repeat	1	63	(0)	747726
1622	22.3	0.0	0.7	chr11	117076874	117077174	(18009448)	+	AluJr4	SINE/Alu	1	299	(13)	750476
725	26.3	18.9	0.5	chr11	117830210	117830637	(17255985)	+	L2a	LINE/L2	2902	3426	(0)	751825
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
329	13.7	4.0	16.7	chr11	118566338	118566410	(16520212)	C	MER53	DNA/hAT	(81)	112	39	753140
2578	3.5	0.0	0.3	chr11	118566411	118566700	(16519922)	+	AluY	SINE/Alu	1	289	(22)	753141
675	33.5	12.4	5.0	chr11	119120360	119121078	(15965544)	C	L2c	LINE/L2	(73)	3314	2526	754272
23	5.4	4.9	2.3	chr11	120211311	120211351	(14875271)	+	(CTG)n	Simple_repeat	1	43	(0)	756150
13	22.3	4.1	2.0	chr11	120211399	120211447	(14875175)	+	(CGGACAG)n	Simple_repeat	1	51	(0)	756151
30	26.3	3.4	2.4	chr11	121452144	121452171	(13634451)	+	(CGGCG)n	Simple_repeat	1	49	(74)	758140
19	17.6	5.9	0.0	chr11	121452172	121452222	(13634400)	+	(GGC)n	Simple_repeat	1	54	(0)	758141
30	26.3	3.4	2.4	chr11	121452223	121452262	(13634360)	+	(CGGCG)n	Simple_repeat	50	123	(0)	758140
2302	10.9	0.3	0.0	chr11	122559391	122559692	(12526930)	+	AluSp	SINE/Alu	1	303	(10)	759748
3733	15.0	6.3	7.0	chr11	122559693	122559946	(12526676)	+	L1MA6	LINE/L1	7200	7454	(265)	759733
651	2.7	0.0	0.0	chr11	122559947	122560019	(12526603)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	759749
619	14.4	0.0	3.9	chr11	122560038	122560141	(12526481)	+	AluSq2	SINE/Alu	206	305	(8)	759750
674	14.8	0.0	0.0	chr11	122560147	122560247	(12526375)	+	AluSq2	SINE/Alu	208	308	(5)	759751
1896	16.7	0.3	0.6	chr11	124794867	124795178	(10291444)	C	AluSx3	SINE/Alu	(0)	311	1	763568
8959	20.7	5.9	5.8	chr11	125664535	125665869	(9420753)	C	L1MEf	LINE/L1	(1529)	5005	3641	764930
1698	28.3	12.3	3.5	chr11	128116137	128116899	(6969723)	+	L1MB8	LINE/L1	96	934	(5933)	768466
330	23.0	20.8	0.8	chr11	128116977	128117103	(6969519)	+	L1M4a2	LINE/L1	694	852	(1804)	768469
2555	21.6	13.1	5.8	chr11	128117223	128118250	(6968372)	+	L1MB8	LINE/L1	1204	2687	(829)	768466
18	19.6	0.0	0.0	chr11	129698779	129698813	(5387809)	+	(T)n	Simple_repeat	1	35	(0)	770682
28	27.2	0.7	6.4	chr11	130002074	130002225	(5084397)	+	(GCGCCCG)n	Simple_repeat	1	143	(0)	771150
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
17	24.2	1.6	3.2	chr12	103853	103914	(133171395)	+	G-rich	Low_complexity	1	63	(0)	778227
284	29.4	4.5	0.0	chr12	643521	643605	(132631704)	C	MIRb	SINE/MIR	(72)	196	108	779138
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
14	22.2	2.3	2.2	chr12	7440325	7440368	(125834941)	+	(GCC)n	Simple_repeat	1	45	(0)	790385
307	4.8	5.2	0.0	chr12	7440440	7440488	(125834821)	C	L1PA8A	LINE/L1	(301)	5830	5776	790386
3020	17.2	7.2	2.5	chr12	7637947	7638553	(125636756)	+	LTR9B	LTR/ERV1	7	644	(0)	790593
679	17.2	8.0	1.6	chr12	7638632	7638788	(125636521)	+	HUERS-P3-int	LTR/ERV1	412	559	(6859)	790594
5775	21.6	5.1	4.9	chr12	7638797	7639003	(125636306)	+	HUERS-P3-int	LTR/ERV1	750	946	(6472)	790594
2121	12.2	0.7	0.0	chr12	7639004	7639289	(125636020)	+	AluSx4	SINE/Alu	1	288	(22)	790595
1053	13.5	0.0	6.2	chr12	7720161	7720338	(125554971)	C	AluSq2	SINE/Alu	(10)	303	137	790832
1220	16.7	1.8	0.9	chr12	7720438	7720658	(125554651)	C	AluJb	SINE/Alu	(3)	309	87	790833
525	25.6	9.6	1.2	chr12	7720716	7720964	(125554345)	C	L1MC4	LINE/L1	(3)	8039	7768	790834
965	34.8	4.3	1.0	chr12	7775320	7775877	(125499432)	+	L2a	LINE/L2	2844	3422	(4)	791000
236	36.2	3.7	1.5	chr12	7995540	7995671	(125279638)	+	L2b	LINE/L2	3053	3187	(188)	791584
15	21.4	1.6	6.3	chr12	8697834	8697897	(124577412)	+	(CGCCG)n	Simple_repeat	1	60	(0)	792746
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
1805	16.9	1.6	2.2	chr12	8860030	8860342	(124414967)	C	AluJb	SINE/Alu	(1)	311	1	793017
373	34.1	0.7	11.2	chr12	8860343	8860435	(124414874)	+	MIR	SINE/MIR	110	185	(23)	793016
265	29.5	9.5	0.0	chr12	11170964	11171058	(122104251)	+	MIRb	SINE/MIR	46	150	(118)	796143
239	21.1	5.3	10.1	chr12	12356797	12356875	(120918434)	+	MIRb	SINE/MIR	124	198	(64)	798012
13	10.8	3.1	3.0	chr12	12357357	12357388	(120917921)	+	(TCCCTG)n	Simple_repeat	1	33	(0)	798018
24	24.3	0.0	0.0	chr12	12725359	12725409	(120549900)	+	(TG)n	Simple_repeat	1	51	(0)	798635
11	21.7	7.3	1.7	chr12	12725648	12725702	(120549607)	+	(CCTCGCG)n	Simple_repeat	1	59	(0)	798636
1251	29.8	16.0	0.9	chr12	14327941	14328482	(118946827)	+	LTR33C	LTR/ERVL	1	628	(1)	801197
9808	3.4	0.6	7.9	chr12	14354081	14355540	(118919769)	+	SVA_C	Retroposon/SVA	32	1384	(0)	801240
2149	25.1	5.7	3.0	chr12	14355597	14356382	(118918927)	+	MSTD-int	LTR/ERVL-MaLR	744	1625	(110)	801234
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1915	16.2	0.0	4.0	chr12	18180467	18180787	(115094522)	+	AluJr	SINE/Alu	5	312	(0)	806320
1987	23.5	10.7	7.8	chr12	18180788	18181685	(115093624)	+	L1MCa	LINE/L1	1452	2375	(4376)	806319
24	20.6	0.0	5.4	chr12	21501481	21501554	(111773755)	+	(TCTCCGA)n	Simple_repeat	1	74	(0)	810844
485	33.2	9.4	0.7	chr12	21650815	21651123	(111624186)	C	L2a	LINE/L2	(91)	3335	2997	811050
266	30.1	10.4	3.7	chr12	21651299	21651405	(111623904)	C	L2a	LINE/L2	(557)	2862	2748	811050
18	4.7	0.0	0.0	chr12	22587532	22587553	(110687756)	+	(TC)n	Simple_repeat	1	22	(0)	812374
592	20.8	8.6	2.5	chr12	22587568	22587687	(110687622)	C	AluJo	SINE/Alu	(184)	128	1	812375
1173	18.7	0.0	0.0	chr12	22587773	22587954	(110687355)	C	AluJr4	SINE/Alu	(44)	268	87	812376
14	17.4	2.3	4.5	chr12	24563185	24563227	(108712082)	+	(GGCG)n	Simple_repeat	1	44	(0)	815081
12	23.9	0.0	2.4	chr12	24563250	24563290	(108712019)	+	(GCGAGCC)n	Simple_repeat	1	41	(0)	815082
402	21.5	15.1	4.8	chr12	24986633	24986798	(108288511)	C	L2	LINE/L2	(1361)	2058	1873	815767
2070	12.0	0.0	0.0	chr12	24986799	24987074	(108288235)	+	AluSz	SINE/Alu	1	276	(36)	815768
293	27.1	0.0	0.0	chr12	24987174	24987232	(108288077)	C	MLT-int	LTR/ERVL-MaLR	(752)	983	925	815769
2595	25.4	10.3	2.2	chr12	24987233	24988129	(108287180)	+	L2a	LINE/L2	905	1878	(1541)	815770
60	0.0	0.0	0.0	chr12	25385502	25385552	(107889757)	+	(AC)n	Simple_repeat	1	51	(0)	816426
11	24.9	3.2	4.7	chr12	26122126	26122187	(107153122)	+	(CGGCGTG)n	Simple_repeat	1	64	(0)	817536
29	3.2	0.0	0.0	chr12	26122283	26122314	(107152995)	+	(GCG)n	Simple_repeat	1	32	(0)	817537
28	4.2	8.2	0.0	chr12	26122613	26122661	(107152648)	+	(GCC)n	Simple_repeat	1	53	(0)	817538
14	18.5	2.6	2.5	chr12	30754859	30754897	(102520412)	+	(CTC)n	Simple_repeat	1	40	(0)	824129
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
6356	11.7	2.3	2.2	chr12	30850965	30851917	(102423392)	+	LTR13_	LTR/ERVK	1	954	(0)	824284
3820	8.0	1.8	1.8	chr12	31947577	31948245	(101327064)	+	MER11A	LTR/ERVK	1	737	(499)	826434
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
11189	12.6	5.3	2.1	chr12	32810981	32812303	(100463006)	C	Tigger4	DNA/TcMar-Tigger	(1363)	1368	2	828164
41180	9.4	0.5	0.1	chr12	34621720	34627344	(98647965)	C	HERVK-int	LTR/ERVK	(759)	6777	1130	830160
1296	15.0	0.8	0.5	chr12	37596074	37650094	(95625215)	+	ALR/Alpha	Satellite/centr	1	54166	(0)	830531
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
315	26.3	8.1	1.5	chr12	39825566	39825762	(93449547)	C	L1MD	LINE/L1	(2732)	3414	3204	832934
16	9.2	7.7	5.4	chr12	40105598	40105651	(93169658)	+	(CGCCG)n	Simple_repeat	1	55	(0)	833296
15	33.1	1.4	1.4	chr12	40105897	40105969	(93169340)	+	(CCG)n	Simple_repeat	1	74	(0)	833297
690	12.3	22.3	0.0	chr12	40146965	40147086	(93128223)	+	AluJb	SINE/Alu	136	292	(20)	833367
538	27.8	4.7	3.6	chr12	40147173	40147508	(93127801)	+	LTR16D	LTR/ERVL	233	675	(0)	833368
377	28.2	3.7	2.5	chr12	40166631	40166790	(93108519)	C	L1M6	LINE/L1	(6291)	205	44	833392
19	23.2	0.0	3.4	chr12	42237770	42237868	(91037441)	+	(CCCCGC)n	Simple_repeat	1	95	(0)	836251
18	31.3	0.0	2.7	chr12	42237908	42237981	(91037328)	+	(CGC)n	Simple_repeat	1	74	(0)	836252
17067	21.8	10.3	3.5	chr12	43523120	43526172	(89749137)	+	L1PB3	LINE/L1	199	3487	(3375)	838192
12	16.5	0.0	0.0	chr12	43835773	43835799	(89439510)	+	(CGGCC)n	Simple_repeat	1	27	(0)	838633
14	18.5	4.8	6.2	chr12	43835973	43836034	(89439275)	+	(GCG)n	Simple_repeat	1	65	(0)	838634
13	7.5	3.1	6.1	chr12	44128129	44128160	(89147149)	+	(CTGC)n	Simple_repeat	1	33	(0)	839043
334	18.3	4.1	0.0	chr12	44948505	44948575	(88326734)	+	UCON101	Unknown	34	107	(13)	840110
2290	10.2	0.0	1.9	chr12	44949039	44949351	(88325958)	+	AluSc	SINE/Alu	1	307	(2)	840111
3635	19.1	1.4	0.4	chr12	45685464	45686166	(87589143)	+	MER21-int	LTR/ERVL	14	723	(3468)	841213
1428	27.8	6.5	3.8	chr12	45686225	45686887	(87588422)	C	MST-int	LTR/ERVL-MaLR	(667)	984	303	841214
1660	18.8	1.0	2.3	chr12	45972300	45972607	(87302702)	+	AluJr	SINE/Alu	1	304	(8)	841673
3268	27.0	4.0	7.9	chr12	45972608	45972806	(87302503)	+	L1MD2	LINE/L1	1004	1195	(5445)	841672
2901	12.2	0.5	0.9	chr12	48417572	48418019	(84857290)	C	L1PA16	LINE/L1	(1)	6165	5720	845168
310	35.9	6.9	2.3	chr12	48418066	48418370	(84856939)	C	L2	LINE/L2	(1672)	1747	1428	845169
401	25.2	13.7	12.7	chr12	49138600	49138954	(84136355)	+	MLT1L	LTR/ERVL-MaLR	1	359	(251)	846467
2109	9.8	0.3	2.4	chr12	53005753	53006047	(80269262)	+	AluSq2	SINE/Alu	1	289	(24)	853908
14	29.9	1.6	1.6	chr12	54173413	54173475	(79101834)	+	(CGCGG)n	Simple_repeat	1	64	(0)	855981
2389	5.9	1.6	0.7	chr12	54548638	54548943	(78726366)	+	AluSx4	SINE/Alu	2	310	(0)	856638
299	28.2	9.4	2.4	chr12	54548944	54548997	(78726312)	+	L3b	LINE/CR1	5073	5137	(95)	856637
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
2015	15.3	3.7	3.4	chr12	55419671	55420048	(77855261)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	857740
10356	14.3	2.8	1.6	chr12	55420049	55420316	(77854993)	C	L1PA14	LINE/L1	(5383)	1306	1043	857739
2692	24.1	4.7	3.0	chr12	55420306	55420899	(77854410)	+	L1PA14	LINE/L1	442	1030	(5659)	857739
15	0.0	0.0	4.3	chr12	56266850	56266872	(77008437)	+	(CCTT)n	Simple_repeat	1	23	(0)	859192
14	24.1	1.4	6.8	chr12	57430746	57430833	(75844476)	+	(GCCCCG)n	Simple_repeat	1	83	(0)	861301
15	19.9	3.6	3.5	chr12	57430880	57430934	(75844375)	+	G-rich	Low_complexity	1	57	(0)	861302
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	31.2	0.0	0.0	chr12	57431186	57431196	(75844113)	+	(CGCA)n	Simple_repeat	1	54	(0)	861304
2556	12.9	6.4	1.8	chr12	57645652	57646121	(75629188)	+	MER4-int	LTR/ERV1	2791	3291	(3307)	861619
2249	11.0	1.6	0.0	chr12	57646122	57646420	(75628889)	C	AluSp	SINE/Alu	(9)	304	1	861628
9415	13.0	3.6	0.3	chr12	58860121	58861642	(74413667)	C	THE1C-int	LTR/ERVL-MaLR	(7)	1573	1	863333
31	3.1	0.0	0.0	chr12	64404467	64404499	(68870810)	+	(GCG)n	Simple_repeat	1	33	(0)	871076
23	18.1	0.0	0.0	chr12	64404541	64404586	(68870723)	+	(CCTG)n	Simple_repeat	1	46	(0)	871077
13	21.4	4.7	0.0	chr12	64404711	64404753	(68870556)	+	(CCGCT)n	Simple_repeat	1	45	(0)	871078
38	6.7	0.0	0.0	chr12	65121822	65121869	(68153440)	+	(TGA)n	Simple_repeat	1	48	(0)	872297
12	24.0	4.8	3.1	chr12	65170235	65170296	(68105013)	+	G-rich	Low_complexity	1	65	(0)	872394
2491	6.7	0.0	0.7	chr12	66170196	66170494	(67104815)	C	AluSc8	SINE/Alu	(14)	297	1	873920
17	23.4	0.0	0.0	chr12	66235137	66235177	(67040132)	+	(TGC)n	Simple_repeat	1	41	(0)	874034
12	10.6	0.0	10.5	chr12	66235170	66235207	(67040102)	+	G-rich	Low_complexity	1	38	(0)	874035
3543	5.4	0.0	0.7	chr12	67771896	67772346	(65502963)	C	LTR7	LTR/ERV1	(2)	448	1	876395
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
16	13.3	3.0	0.0	chr12	69240134	69240166	(64035143)	+	(CCG)n	Simple_repeat	1	34	(0)	878961
2076	25.9	10.8	4.2	chr12	69358807	69359638	(63915671)	C	HAL1	LINE/L1	(358)	2149	1234	879124
14	23.2	1.9	3.6	chr12	69359672	69359725	(63915584)	+	(GCGCGT)n	Simple_repeat	1	55	(0)	879126
431	32.1	3.6	3.0	chr12	70070415	70070578	(63204731)	C	MamGypsy2-LTR	LTR/Gypsy	(12)	171	7	880333
1148	20.5	2.3	0.8	chr12	70070585	70070844	(63204465)	C	MamGypsy2-I	LTR/Gypsy	(0)	4166	3903	880333
13	18.6	4.8	6.2	chr12	72272276	72272337	(61002972)	+	(GCGAG)n	Simple_repeat	1	65	(0)	883612
307	23.8	13.9	2.8	chr12	76540242	76540349	(56734960)	C	MIR1_Amn	SINE/MIR	(83)	147	26	889405
12	7.8	3.2	6.2	chr12	76879075	76879105	(56396204)	+	(CCGCC)n	Simple_repeat	1	32	(0)	889997
12	19.5	7.1	3.3	chr12	77324876	77324931	(55950378)	+	(CGCGCT)n	Simple_repeat	1	60	(0)	890694
16	12.1	11.1	0.0	chr12	77324940	77324984	(55950325)	+	(GGC)n	Simple_repeat	1	50	(0)	890695
18	15.6	0.0	0.0	chr12	77325016	77325051	(55950258)	+	(CCGCTC)n	Simple_repeat	1	36	(0)	890696
16	16.8	0.0	0.0	chr12	78385649	78385676	(54889633)	+	A-rich	Low_complexity	1	28	(0)	892079
29958	25.5	3.0	2.9	chr12	78477294	78484883	(54790426)	+	HERVIP10B3-int	LTR/ERV1	2	7599	(4)	892211
13	20.8	0.0	0.0	chr12	79934521	79934553	(53340756)	+	(CCCT)n	Simple_repeat	1	33	(0)	894280
15823	14.1	2.8	2.2	chr12	81041908	81043349	(52231960)	C	Tigger4	DNA/TcMar-Tigger	(1261)	1470	2	895890
15570	15.0	2.7	1.4	chr12	81803857	81806551	(51468758)	C	Tigger4	DNA/TcMar-Tigger	(2)	2729	1	896885
19	0.0	0.0	0.0	chr12	82781400	82781420	(50493889)	+	(T)n	Simple_repeat	1	21	(0)	898246
23	25.9	0.0	0.0	chr12	82781659	82781718	(50493591)	+	(TTT)n	Simple_repeat	1	60	(0)	898247
4384	12.2	5.8	13.1	chr12	83388993	83389899	(49885410)	+	LTR1A2	LTR/ERV1	1	837	(0)	899045
436	28.4	2.8	18.5	chr12	89857735	89858032	(43417277)	+	MIR	SINE/MIR	2	251	(11)	907695
348	37.4	12.5	2.6	chr12	89858062	89858371	(43416938)	C	L2c	LINE/L2	(344)	3075	2731	907693
257	33.3	3.4	4.0	chr12	89858372	89858521	(43416788)	C	MER5B	DNA/hAT-Charlie	(0)	178	30	907696
284	35.4	11.0	3.0	chr12	90964455	90964858	(42310451)	C	L2c	LINE/L2	(36)	3390	2919	909292
240	33.0	5.4	7.8	chr12	92049464	92049693	(41225616)	C	L2a	LINE/L2	(214)	3161	2938	910825
255	21.1	9.9	7.9	chr12	92049774	92049912	(41225397)	C	MLT1J	LTR/ERVL-MaLR	(61)	451	310	910827
13	23.6	6.0	0.0	chr12	92929241	92929290	(40346019)	+	(GAGC)n	Simple_repeat	1	53	(0)	912350
12	19.3	8.5	0.0	chr12	94460065	94460111	(38815198)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	915225
15211	13.5	3.1	3.1	chr12	99176972	99178556	(34096753)	C	Tigger4	DNA/TcMar-Tigger	(986)	1745	150	923521
2514	8.1	1.7	0.0	chr12	99236767	99237112	(34038197)	+	L1PA13	LINE/L1	5810	6161	(2)	923607
12	21.6	0.0	0.0	chr12	100142765	100142796	(33132513)	+	(CCACGG)n	Simple_repeat	1	32	(0)	924965
189	16.1	0.0	0.0	chr12	104456707	104456737	(28818572)	C	MER131	DNA?	(150)	65	35	932617
16	20.7	2.2	2.1	chr12	104457113	104457158	(28818151)	+	(GGC)n	Simple_repeat	1	47	(0)	932618
18	15.3	0.0	2.6	chr12	104457138	104457175	(28818134)	+	GA-rich	Low_complexity	1	38	(0)	932619
1342	11.8	3.6	0.5	chr12	107056468	107056680	(26218629)	+	MER30	DNA/hAT-Charlie	1	220	(10)	937330
916	31.4	8.5	11.7	chr12	111304479	111305246	(21970063)	C	MamGypLTR3a	LTR/Gypsy	(2)	979	239	946756
16	26.9	0.0	8.5	chr12	116880900	116880954	(16394355)	+	(CTCCCG)n	Simple_repeat	1	89	(0)	959184
13	10.0	5.9	2.8	chr12	116880955	116880988	(16394321)	+	(CTCG)n	Simple_repeat	1	36	(0)	959185
16	5.6	7.3	4.5	chr12	116881117	116881157	(16394152)	+	(GCGCCG)n	Simple_repeat	1	44	(0)	959186
14	25.6	1.7	3.3	chr12	118104038	118104096	(15171213)	+	(GCCGG)n	Simple_repeat	1	60	(0)	961850
1528	16.0	0.7	9.1	chr12	118135522	118135736	(15139573)	C	AluJo	SINE/Alu	(113)	199	1	961945
343	17.5	1.7	0.0	chr12	118135834	118135890	(15139419)	C	LSU-rRNA_Hsa	rRNA	(2344)	2691	2634	961947
704	26.4	3.6	5.7	chr12	119746202	119746430	(13528879)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	965421
1724	15.0	2.0	1.0	chr12	121672182	121672481	(11602828)	+	AluJr	SINE/Alu	6	308	(4)	970009
16	23.9	2.9	4.2	chr12	122078733	122078801	(11196508)	+	(CGCCG)n	Simple_repeat	1	71	(0)	971060
20	25.1	2.3	4.5	chr12	122078969	122079055	(11196254)	+	(CCGCG)n	Simple_repeat	1	89	(0)	971061
225	27.9	18.6	0.0	chr12	125051362	125051440	(8223869)	C	L2c	LINE/L2	(0)	3387	3291	977473
506	27.5	6.3	1.3	chr12	132985913	132986063	(289246)	C	L1MB7	LINE/L1	(3665)	2550	2392	990290
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
3692	9.8	7.8	0.2	chr12	133079464	133079975	(195334)	+	MER41A	LTR/ERV1	1	554	(0)	990480
792	19.9	10.1	2.5	chr13	20772337	20772537	(93591791)	+	MER20	DNA/hAT-Charlie	1	218	(1)	994838
269	15.9	11.5	0.0	chr13	20773197	20773265	(93591063)	C	L1ME2	LINE/L1	(24)	6140	6063	994839
291	25.9	10.4	0.0	chr13	20848051	20848162	(93516166)	C	Tigger15a	DNA/TcMar-Tigger	(309)	406	282	994945
5494	24.4	11.9	1.3	chr13	21661586	21663133	(92701195)	C	MSTB2-int	LTR/ERVL-MaLR	(0)	1735	2	996486
14474	15.5	3.6	0.3	chr13	22017304	22019539	(92344789)	+	Tigger4	DNA/TcMar-Tigger	354	2663	(68)	996965
2037	12.0	2.0	0.7	chr13	24727844	24728142	(89636186)	+	AluSx3	SINE/Alu	1	303	(8)	1000720
19	14.2	2.0	3.9	chr13	24728271	24728300	(89636028)	+	(TAT)n	Simple_repeat	1	30	(0)	1000721
2084	9.9	0.3	2.7	chr13	24728301	24728592	(89635736)	C	AluSq2	SINE/Alu	(26)	287	3	1000722
13	22.6	4.1	2.0	chr13	25372302	25372350	(88991978)	+	(GGCGC)n	Simple_repeat	1	51	(0)	1001744
12	26.2	0.0	2.3	chr13	25372552	25372594	(88991734)	+	(GTGCGC)n	Simple_repeat	1	43	(0)	1001745
40	19.0	2.8	2.7	chr13	26760787	26760893	(87603435)	+	(CCCG)n	Simple_repeat	1	110	(0)	1003753
17	9.9	0.0	11.1	chr13	26760914	26760979	(87603349)	+	(GGCGAGG)n	Simple_repeat	1	58	(0)	1003754
19	0.0	0.0	0.0	chr13	27620497	27620520	(86743808)	+	(CGC)n	Simple_repeat	1	24	(0)	1005251
287	24.7	10.1	0.0	chr13	30409014	30409102	(83955226)	C	L2b	LINE/L2	(5)	3370	3272	1009642
18	27.4	1.3	4.0	chr13	30464650	30464724	(83899604)	+	(CCG)n	Simple_repeat	1	76	(0)	1009735
31	0.0	0.0	0.0	chr13	30464762	30464788	(83899540)	+	(TG)n	Simple_repeat	1	27	(0)	1009736
18	22.8	3.6	0.0	chr13	30464807	30464814	(83899514)	+	(GCGCGG)n	Simple_repeat	1	23	(35)	1009737
14	13.2	0.0	7.7	chr13	30464815	30464853	(83899475)	+	(GCG)n	Simple_repeat	1	39	(0)	1009738
18	22.8	3.6	0.0	chr13	30464854	30464862	(83899466)	+	(GCGCGG)n	Simple_repeat	24	58	(0)	1009737
12	15.5	3.5	0.0	chr13	30464885	30464913	(83899415)	+	G-rich	Low_complexity	1	30	(0)	1009739
15	11.7	0.0	0.0	chr13	30464913	30464940	(83899388)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1009740
15	28.6	1.5	2.9	chr13	30464956	30465022	(83899306)	+	(CCGC)n	Simple_repeat	1	68	(0)	1009741
24	23.2	5.3	2.0	chr13	31199925	31200018	(83164310)	+	(GGC)n	Simple_repeat	1	99	(0)	1011022
21	24.9	3.2	4.2	chr13	31200242	31200334	(83163994)	+	(GCGCC)n	Simple_repeat	1	96	(0)	1011023
13	22.0	2.0	3.9	chr13	31200559	31200609	(83163719)	+	(CCCGCCC)n	Simple_repeat	1	52	(0)	1011024
13514	11.1	12.6	7.0	chr13	31842447	31844342	(82519986)	C	Tigger4	DNA/TcMar-Tigger	(642)	2089	1	1011902
16	18.1	5.8	1.8	chr13	32586783	32586834	(81777494)	+	G-rich	Low_complexity	1	55	(0)	1013053
15	8.2	0.0	3.6	chr13	32586911	32586938	(81777390)	+	(CGG)n	Simple_repeat	1	28	(0)	1013054
27	19.2	5.1	1.2	chr13	32586968	32587046	(81777282)	+	(GCCGCC)n	Simple_repeat	1	83	(0)	1013055
15	23.9	4.3	6.1	chr13	32587131	32587224	(81777104)	+	G-rich	Low_complexity	1	98	(0)	1013056
21	16.8	3.6	1.8	chr13	33016340	33016394	(81347934)	+	G-rich	Low_complexity	1	57	(0)	1013706
12278	13.9	2.2	0.4	chr13	33549522	33551443	(80812885)	C	Tigger4	DNA/TcMar-Tigger	(769)	1962	5	1014455
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
15101	14.6	4.6	1.4	chr13	38996615	38999257	(75365071)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	1	1022030
18	21.6	2.1	0.0	chr13	39603217	39603264	(74761064)	+	(CCTCC)n	Simple_repeat	1	49	(0)	1022860
1259	18.4	4.6	3.4	chr13	39943163	39943482	(74420846)	+	MER33	DNA/hAT-Charlie	1	324	(0)	1023349
232	30.7	0.0	3.9	chr13	40599342	40599419	(73764909)	C	MIRb	SINE/MIR	(36)	232	158	1024364
314	24.6	5.5	1.4	chr13	40599421	40599622	(73764706)	C	L1ME3	LINE/L1	(3)	6159	5872	1024365
20	6.3	0.0	5.4	chr13	41263790	41263826	(73100502)	+	(GGGA)n	Simple_repeat	1	37	(0)	1025541
22846	9.7	2.8	1.2	chr13	43617918	43623752	(70740576)	C	L1PB1	LINE/L1	(679)	6188	255	1029116
5696	25.7	8.1	6.7	chr13	44629760	44631457	(69732871)	+	MSTD-int	LTR/ERVL-MaLR	2	1726	(9)	1030632
396	27.0	9.5	1.5	chr13	45464402	45464582	(68899746)	C	L1ME4b	LINE/L1	(336)	5788	5624	1032357
17962	12.4	1.5	0.8	chr13	45917781	45920354	(68443974)	C	Tigger4	DNA/TcMar-Tigger	(125)	2606	1	1033076
683	30.9	4.3	1.6	chr13	48737710	48737956	(65626372)	C	MIRb	SINE/MIR	(8)	260	7	1037264
320	31.4	4.8	1.5	chr13	48738236	48738378	(65625950)	+	MIR	SINE/MIR	16	163	(45)	1037265
23	20.5	4.4	4.2	chr13	49220073	49220163	(65144165)	+	G-rich	Low_complexity	1	95	(0)	1037997
14	23.7	1.9	3.6	chr13	49220195	49220248	(65144080)	+	(GCGCA)n	Simple_repeat	1	55	(0)	1037998
227	8.6	0.0	2.8	chr13	50357865	50357900	(64006428)	C	LTR27	LTR/ERV1	(104)	532	498	1040004
12	30.4	1.7	1.7	chr13	50909720	50909777	(63454551)	+	(GCGCC)n	Simple_repeat	1	59	(0)	1040827
2177	22.8	19.4	5.7	chr13	56438333	56439235	(57925093)	C	MLT-int	LTR/ERVL-MaLR	(171)	1564	533	1048338
6961	17.9	8.6	7.7	chr13	61765292	61767029	(52597299)	C	MER52A	LTR/ERV1	(0)	1755	1	1055165
1343	32.2	2.7	1.1	chr13	61891217	61891759	(52472569)	+	MLT1H1	LTR/ERVL-MaLR	4	555	(0)	1055326
17442	17.3	1.9	3.8	chr13	62508644	62513010	(51851318)	C	L1PA16	LINE/L1	(1686)	4797	551	1056092
1554	28.7	5.0	6.7	chr13	62724331	62725212	(51639116)	C	L1ME2z	LINE/L1	(2707)	3439	2574	1056345
866	24.0	3.8	3.1	chr13	62725261	62725548	(51638780)	+	Charlie1a	DNA/hAT-Charlie	856	1145	(310)	1056348
11002	7.5	0.8	0.0	chr13	62725556	62727827	(51636501)	C	L1PA6	LINE/L1	(0)	6154	3869	1056349
1901	13.7	0.0	0.0	chr13	62885907	62886168	(51478160)	+	AluSq2	SINE/Alu	38	299	(14)	1056562
3446	13.5	0.7	2.2	chr13	62886169	62886911	(51477417)	C	L1PA15	LINE/L1	(640)	5525	4792	1056561
5364	13.4	0.6	0.0	chr13	63014802	63015644	(51348684)	C	L1PA13	LINE/L1	(16)	6147	5300	1056710
9268	3.4	0.0	0.1	chr13	63196204	63198095	(51166233)	+	L1PA4	LINE/L1	4260	6150	(5)	1056965
3736	17.4	10.4	0.0	chr13	63435584	63436318	(50928010)	C	LTR8B	LTR/ERV1	(0)	820	1	1057274
1284	30.0	2.5	5.1	chr13	63481242	63481694	(50882634)	C	LTR16A1	LTR/ERVL	(12)	444	4	1057340
15223	10.0	2.8	1.1	chr13	64119798	64121618	(50242710)	C	L1PA5	LINE/L1	(4320)	1864	4	1058147
2708	24.3	6.9	3.2	chr13	64206412	64207397	(50156931)	C	LTR2752	LTR/ERV1	(1)	1076	1	1058245
706	36.9	10.5	5.0	chr13	64240779	64242334	(50121994)	C	L2a	LINE/L2	(1205)	2214	563	1058280
3677	21.3	3.6	3.0	chr13	64970276	64970625	(49393703)	+	MER6	DNA/TcMar-Tigger	1	352	(513)	1059204
28	3.3	0.0	0.0	chr13	64970626	64970656	(49393672)	+	(AATG)n	Simple_repeat	1	31	(0)	1059205
3677	21.3	3.6	3.0	chr13	64970657	64971165	(49393163)	+	MER6	DNA/TcMar-Tigger	353	864	(1)	1059204
2425	8.8	0.3	0.0	chr13	65327068	65327372	(49036956)	+	AluSc	SINE/Alu	1	306	(3)	1059663
682	28.0	2.5	6.5	chr13	65327373	65327506	(49036822)	+	LTR16A2	LTR/ERVL	361	487	(8)	1059662
1618	14.9	9.3	6.0	chr13	65368495	65368858	(48995470)	+	MER51B	LTR/ERV1	1	377	(0)	1059717
2474	27.5	1.5	2.4	chr13	65368859	65368969	(48995359)	C	MLT1E	LTR/ERVL-MaLR	(540)	113	3	1059715
23822	7.8	1.3	0.4	chr13	65435414	65441515	(48922813)	+	L1PA6	LINE/L1	175	6316	(11)	1059820
182	18.4	2.6	0.0	chr13	65781242	65781279	(48583049)	+	L2a	LINE/L2	3374	3412	(14)	1060212
346	30.2	7.3	4.3	chr13	65973006	65973258	(48391070)	+	L1MEh	LINE/L1	640	900	(1335)	1060459
4464	17.9	6.5	2.0	chr13	65973508	65973848	(48390480)	C	L1MA4	LINE/L1	(23)	6277	5938	1060463
15	4.8	0.0	0.0	chr13	66993860	66993881	(47370447)	+	(TGAT)n	Simple_repeat	1	22	(0)	1061718
552	30.4	10.2	0.7	chr13	66993893	66994514	(47369814)	C	LTR50	LTR/ERVL	(0)	795	2	1061719
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
367	35.4	7.3	5.6	chr13	67390396	67390787	(46973541)	+	MLT1J	LTR/ERVL-MaLR	72	470	(42)	1062224
314	35.5	12.6	3.7	chr13	67438868	67439321	(46925007)	C	L1M6	LINE/L1	(5711)	785	286	1062279
3845	15.8	2.5	3.2	chr13	68024029	68024755	(46339573)	C	MER50	LTR/ERV1	(12)	722	1	1063003
2507	16.9	14.3	4.2	chr13	68056803	68057351	(46306977)	C	LTR18B	LTR/ERVL	(0)	614	1	1063046
190	29.7	6.3	6.3	chr13	68057352	68057430	(46306898)	C	L2a	LINE/L2	(12)	3414	3336	1063047
1883	19.0	6.5	0.8	chr13	68361845	68362221	(46002107)	+	L1PA17	LINE/L1	5726	6125	(41)	1063443
325	36.0	4.1	5.6	chr13	68362324	68362573	(46001755)	C	MamRep605	LTR?	(108)	741	496	1063444
39	4.7	0.0	0.0	chr13	68379145	68379189	(45985139)	+	(CTAT)n	Simple_repeat	1	45	(0)	1063471
3479	23.1	11.4	5.4	chr13	69769407	69770414	(44593914)	+	LTR27E	LTR/ERV1	1	1077	(0)	1065224
5444	12.6	2.2	1.7	chr13	69815044	69815710	(44548618)	+	L1PA17	LINE/L1	5490	6145	(21)	1065280
7050	18.2	11.7	0.8	chr13	69923695	69925180	(44439148)	+	MER52A	LTR/ERV1	1	1755	(0)	1065411
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
293	28.8	2.1	8.9	chr13	70204075	70204191	(44160137)	+	L1ME3D	LINE/L1	6073	6123	(0)	1065828
3405	14.4	2.5	4.9	chr13	70339519	70340146	(44024182)	+	LTR9	LTR/ERV1	1	612	(0)	1066004
299	38.4	3.5	6.3	chr13	70606881	70607327	(43757001)	+	L2a	LINE/L2	2975	3408	(18)	1066359
6818	14.1	0.2	2.3	chr13	70687744	70688940	(43675388)	+	L1P4	LINE/L1	4065	5235	(911)	1066464
10722	18.3	2.4	1.0	chr13	70688949	70690134	(43674194)	C	L1M4	LINE/L1	(1744)	5256	4057	1066465
200	32.7	6.6	5.8	chr13	71695494	71695613	(42668715)	C	L2c	LINE/L2	(255)	3132	3012	1067790
545	23.1	3.6	5.1	chr13	72523249	72523444	(41840884)	+	UCON4	Unknown	55	247	(56)	1068893
4611	19.4	1.8	0.3	chr13	72692575	72693422	(41670906)	+	MST-int	LTR/ERVL-MaLR	213	1072	(579)	1069182
1186	23.5	5.5	4.2	chr13	73231350	73231634	(41132694)	C	AluJr	SINE/Alu	(20)	292	4	1070216
678	33.4	13.8	3.0	chr13	73231653	73231808	(41132520)	C	L3	LINE/CR1	(89)	4010	3852	1070217
54	0.0	0.0	0.0	chr13	74287350	74287395	(40076933)	+	(GA)n	Simple_repeat	1	46	(0)	1071768
230	19.4	3.1	11.4	chr13	75437801	75437870	(38926458)	C	MER135	DNA	(15)	213	150	1073325
20	16.2	0.0	2.3	chr13	75549747	75549789	(38814539)	+	(GGC)n	Simple_repeat	1	43	(0)	1073544
5292	14.3	1.8	0.3	chr13	76196516	76197618	(38166710)	+	L1PA15	LINE/L1	5047	6161	(4)	1074406
228	26.4	0.0	0.0	chr13	76412397	76412449	(37951879)	+	L4_C_Mam	LINE/RTE-X	4825	4877	(261)	1074690
34	6.7	2.1	0.0	chr13	76886255	76886302	(37478026)	+	(CGC)n	Simple_repeat	1	49	(0)	1075376
12	15.5	3.5	0.0	chr13	76886311	76886339	(37477989)	+	(GAGCG)n	Simple_repeat	1	30	(0)	1075377
1777	12.9	0.4	4.0	chr13	76972143	76972414	(37391914)	+	AluJb	SINE/Alu	31	292	(20)	1075525
28	26.9	2.1	1.0	chr13	77026662	77026756	(37337572)	+	(CCGCC)n	Simple_repeat	1	97	(0)	1075600
16	18.9	0.0	0.0	chr13	77027214	77027243	(37337085)	+	G-rich	Low_complexity	1	30	(0)	1075601
1070	27.3	9.2	3.6	chr13	78532203	78532764	(35831564)	+	HAL1	LINE/L1	1911	2507	(0)	1077674
398	30.6	0.9	2.7	chr13	78532879	78533010	(35831318)	C	MIRb	SINE/MIR	(45)	223	88	1077676
830	33.2	13.2	3.9	chr13	78533146	78533891	(35830437)	+	L3	LINE/CR1	1961	2786	(1313)	1077677
20	25.9	1.4	2.7	chr13	78603413	78603484	(35760844)	+	(GCT)n	Simple_repeat	1	73	(0)	1077764
452	25.6	3.5	2.1	chr13	78786526	78786665	(35577663)	+	UCON31	Unknown	131	272	(182)	1078037
19	26.2	0.0	3.0	chr13	79405803	79405869	(34958459)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	1078870
277	25.0	6.2	0.0	chr13	79406598	79406673	(34957655)	+	Charlie17	DNA/hAT-Charlie	2834	2914	(2)	1078871
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
531	31.9	9.8	0.6	chr13	79529006	79529236	(34835092)	C	MIRc	SINE/MIR	(3)	265	6	1079097
1579	29.6	14.6	4.5	chr13	80977018	80977662	(33386666)	C	MST-int	LTR/ERVL-MaLR	(238)	1413	686	1080964
14	33.5	2.2	2.2	chr13	84399168	84399256	(29965072)	+	(TATGTG)n	Simple_repeat	1	91	(0)	1085185
2364	17.0	9.8	4.3	chr13	84399437	84400015	(29964313)	+	LTR18B	LTR/ERVL	1	614	(0)	1085186
35931	6.4	0.6	0.5	chr13	84873737	84876707	(29487621)	+	HERVK14C-int	LTR/ERVK	4378	7434	(0)	1085796
803	21.7	1.1	4.5	chr13	84876708	84876736	(29487592)	C	MER4-int	LTR/ERV1	(2885)	5235	5214	1085798
4719	5.3	0.7	0.2	chr13	84876737	84877320	(29487008)	+	LTR14C	LTR/ERVK	1	587	(0)	1085799
5189	29.1	4.0	3.5	chr13	85012302	85014027	(29350301)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	1085983
2257	18.6	6.1	16.9	chr13	85675115	85675795	(28688533)	+	LTR26	LTR/ERV1	1	603	(0)	1086849
1309	24.3	12.9	2.9	chr13	86315055	86315507	(28048821)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1087568
45	2.4	0.0	0.0	chr13	87673999	87674041	(26690287)	+	(CA)n	Simple_repeat	1	43	(0)	1089328
2144	21.7	3.8	7.0	chr13	88227073	88227647	(26136681)	C	MLT2B4	LTR/ERVL	(0)	556	1	1090058
2094	11.0	1.3	4.8	chr13	89350047	89350356	(25013972)	+	AluSx1	SINE/Alu	1	299	(13)	1091490
4101	13.1	1.7	2.0	chr13	89350442	89351140	(25013188)	+	MER50B	LTR/ERV1	1	697	(0)	1091491
582	25.8	7.5	2.1	chr13	89417795	89418032	(24946296)	C	LTR52	LTR/ERVL	(162)	259	8	1091572
3788	13.5	1.1	2.2	chr13	89755768	89756396	(24607932)	+	LTR77	LTR/ERV1	1	622	(0)	1092043
1203	28.9	18.0	1.7	chr13	89756397	89757352	(24606976)	+	L1MC4a	LINE/L1	6454	7617	(265)	1092042
4172	15.9	0.2	0.0	chr13	90434864	90435495	(23928833)	C	PRIMA4-int	LTR/ERV1	(7079)	1191	561	1092916
272	18.9	3.6	0.0	chr13	91032527	91032579	(23331749)	+	MER50	LTR/ERV1	1	55	(679)	1093679
435	20.2	15.0	0.0	chr13	91032578	91032696	(23331632)	+	MER58A	DNA/hAT-Charlie	28	167	(57)	1093680
196	22.5	0.0	0.0	chr13	94550361	94550400	(19813928)	C	L2b	LINE/L2	(10)	3365	3326	1098499
377	20.7	15.8	9.6	chr13	94771768	94771972	(19592356)	+	MIRc	SINE/MIR	9	225	(43)	1098876
193	25.0	3.2	7.7	chr13	94771919	94771983	(19592345)	+	AmnSINE1	SINE/5S-Deu-L2	508	569	(6)	1098877
284	21.4	0.0	0.0	chr13	94772055	94772110	(19592218)	+	Eulor6C	DNA?	2	57	(151)	1098878
5622	21.6	5.8	4.0	chr13	95649034	95650315	(18714013)	C	MLT1A1-int	LTR/ERVL-MaLR	(13)	1722	254	1100485
4483	28.5	6.6	3.6	chr13	95703665	95704851	(18659477)	C	ERVL-E-int	LTR/ERVL	(339)	5328	4109	1100557
2465	11.0	0.0	0.0	chr13	95704852	95705151	(18659177)	C	AluSz6	SINE/Alu	(12)	300	1	1100560
252	24.3	3.6	16.4	chr13	96764964	96765056	(17599272)	C	MER3	DNA/hAT-Charlie	(18)	191	115	1102054
13	13.4	6.1	0.0	chr13	97141833	97141865	(17222463)	+	(CAGAGG)n	Simple_repeat	1	35	(0)	1102578
1975	12.1	0.0	0.0	chr13	97230016	97230263	(17134065)	+	AluSp	SINE/Alu	1	248	(65)	1102690
26	28.2	1.2	0.0	chr13	97976248	97976327	(16388001)	+	(CCCCGA)n	Simple_repeat	1	81	(0)	1103821
13	18.9	5.8	3.6	chr13	99103635	99103686	(15260642)	+	(TCC)n	Simple_repeat	1	55	(0)	1105700
11102	12.7	5.0	0.7	chr13	99378550	99380237	(14984091)	C	Tigger4	DNA/TcMar-Tigger	(960)	1771	1	1106156
25	18.5	1.8	0.0	chr13	99970035	99970109	(14394219)	+	(GCG)n	Simple_repeat	1	76	(0)	1107124
41	2.4	0.0	0.0	chr13	99970408	99970449	(14393879)	+	(GGC)n	Simple_repeat	1	42	(0)	1107125
13	16.6	0.0	0.0	chr13	99970642	99970668	(14393660)	+	(GCC)n	Simple_repeat	1	27	(0)	1107126
764	29.5	4.8	5.3	chr13	100811888	100812266	(13552062)	C	UCON20	Unknown	(79)	690	314	1108544
422	29.2	6.8	0.0	chr13	102870951	102871128	(11493200)	C	MLT1G1	LTR/ERVL-MaLR	(2)	577	387	1111414
7063	3.3	0.1	0.0	chr13	105150757	105151602	(9212726)	+	L1PA4	LINE/L1	5307	6153	(2)	1114360
8738	14.8	1.9	0.9	chr13	105151604	105153091	(9211237)	+	Tigger4	DNA/TcMar-Tigger	940	2443	(288)	1114361
7493	20.3	5.2	5.5	chr13	110402053	110403792	(3960536)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	1	1121224
3167	25.7	11.4	3.8	chr13	112947271	112948547	(1415781)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1651	266	1124083
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
21	16.1	0.0	0.0	chr14	21384077	21384117	(85659601)	+	(T)n	Simple_repeat	1	41	(0)	1129660
6571	23.2	0.9	5.2	chr14	21957387	21959639	(85084079)	C	L1PA15	LINE/L1	(4088)	4072	1874	1130574
13	23.2	7.5	1.4	chr14	23301599	23301665	(83742053)	+	(GGAAGGC)n	Simple_repeat	1	72	(0)	1132659
1767	18.8	0.0	0.0	chr14	23354916	23355202	(83688516)	C	AluJb	SINE/Alu	(21)	291	5	1132752
410	29.7	14.0	1.4	chr14	23355353	23355564	(83688154)	C	MIRc	SINE/MIR	(3)	265	23	1132753
14	18.4	2.1	4.2	chr14	24141475	24141521	(82902197)	+	(GCCCCCG)n	Simple_repeat	1	48	(0)	1133811
19	26.1	1.7	0.0	chr14	24430178	24430236	(82613482)	+	(GGCCC)n	Simple_repeat	1	60	(0)	1134255
771	2.1	0.0	0.0	chr14	26435117	26435210	(80608508)	C	L1PA4	LINE/L1	(2)	6153	6060	1136805
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
27	22.9	0.9	7.1	chr14	26598275	26598385	(80445333)	+	G-rich	Low_complexity	1	112	(0)	1137004
14	24.3	1.5	6.1	chr14	28766590	28766596	(78277122)	+	(GCGG)n	Simple_repeat	1	61	(0)	1139686
12	21.8	1.9	5.6	chr14	28766597	28766649	(78277069)	+	G-rich	Low_complexity	1	54	(0)	1139687
21	0.0	3.1	3.0	chr14	28766883	28766914	(78276804)	+	(GCT)n	Simple_repeat	1	33	(0)	1139688
19	24.7	0.0	1.8	chr14	28766917	28766942	(78276776)	+	GA-rich	Low_complexity	1	53	(0)	1139689
18	12.0	0.0	0.0	chr14	28766943	28766969	(78276749)	+	(G)n	Simple_repeat	1	27	(0)	1139690
28	8.9	0.0	3.9	chr14	28767021	28767072	(78276646)	+	(TTTTTTC)n	Simple_repeat	1	52	(0)	1139691
30	18.9	4.1	4.0	chr14	28767162	28767258	(78276460)	+	(GCC)n	Simple_repeat	1	101	(0)	1139692
1829	21.1	2.8	1.6	chr14	31841416	31841867	(75201851)	C	L1ME3A	LINE/L1	(778)	5368	4911	1144259
450	23.5	2.6	0.4	chr14	31953025	31953143	(75090575)	+	MIR	SINE/MIR	110	239	(29)	1144432
294	18.9	0.0	0.0	chr14	31953326	31953378	(75090340)	+	Tigger1	DNA/TcMar-Tigger	1	53	(2365)	1144433
51	25.8	4.9	0.0	chr14	31953379	31953542	(75090176)	+	(TCTC)n	Simple_repeat	1	172	(0)	1144434
20	0.0	0.0	0.0	chr14	37197388	37197409	(69846309)	+	(A)n	Simple_repeat	1	22	(0)	1152646
2404	11.3	0.3	0.3	chr14	37205103	37205403	(69838315)	C	AluSq	SINE/Alu	(12)	301	1	1152661
11490	9.6	1.9	1.7	chr14	37205404	37205470	(69838248)	+	THE1B-int	LTR/ERVL-MaLR	361	417	(1163)	1152660
3627	7.9	0.8	0.4	chr14	37205471	37205938	(69837780)	C	L1PA6	LINE/L1	(1)	6153	5684	1152662
28	23.1	0.0	3.7	chr14	44897468	44897548	(62146170)	+	(GGC)n	Simple_repeat	1	81	(0)	1162310
7491	18.1	1.6	1.4	chr14	46780880	46783463	(60260255)	+	L1P4a	LINE/L1	1130	3549	(3217)	1164713
10978	16.1	3.4	1.6	chr14	48095599	48097482	(58946236)	C	Tigger4	DNA/TcMar-Tigger	(811)	1920	2	1166370
20	25.8	0.0	4.3	chr14	49767563	49767632	(57276086)	+	(CGG)n	Simple_repeat	1	70	(0)	1168591
16	16.9	0.0	0.0	chr14	49892575	49892601	(57151117)	+	A-rich	Low_complexity	1	27	(0)	1168853
22	14.7	2.2	0.0	chr14	50312611	50312655	(56731063)	+	(CGCCCC)n	Simple_repeat	1	46	(0)	1169749
187	31.9	13.8	0.0	chr14	50312897	50312965	(56730753)	C	L2b	LINE/L2	(22)	3353	3274	1169750
278	24.1	12.6	1.2	chr14	50313052	50313135	(56730583)	+	MIR3	SINE/MIR	91	185	(23)	1169751
1659	27.5	6.2	6.6	chr14	55261632	55262386	(51781332)	+	Tigger10	DNA/TcMar-Tigger	385	1136	(708)	1177369
1738	7.8	0.0	5.0	chr14	55599464	55599721	(51443997)	C	AluSx1	SINE/Alu	(11)	301	57	1178001
13630	13.2	3.8	1.2	chr14	57212165	57213085	(49830633)	C	Tigger4	DNA/TcMar-Tigger	(1262)	1469	496	1180433
404	23.1	17.9	1.2	chr14	58199568	58199729	(48843989)	+	MIRb	SINE/MIR	29	223	(45)	1181805
19	18.2	7.5	3.5	chr14	58200077	58200156	(48843562)	+	(CCGCGG)n	Simple_repeat	1	86	(0)	1181806
19	18.0	10.9	2.0	chr14	58200157	58200165	(48843553)	+	(AGCGCCG)n	Simple_repeat	4	102	(0)	1181807
1423	24.6	6.8	1.5	chr14	59074156	59074607	(47969111)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	27	1183218
2240	10.7	0.3	0.0	chr14	60957844	60958132	(46085586)	C	AluSp	SINE/Alu	(19)	294	5	1185805
2450	27.4	6.8	2.8	chr14	60958133	60958622	(46085096)	C	L1M1	LINE/L1	(4524)	3041	2531	1185802
1028	30.6	6.8	2.2	chr14	61127783	61128186	(45915532)	C	MER115	DNA/hAT-Tip100	(259)	434	11	1186016
1920	8.1	0.4	2.2	chr14	61269361	61269627	(45774091)	C	L1PA13	LINE/L1	(9)	6154	5893	1186265
895	12.2	0.0	0.8	chr14	61270186	61270308	(45773410)	+	AluJr	SINE/Alu	1	122	(190)	1186266
15	25.1	4.9	0.0	chr14	63852902	63852962	(43190756)	+	G-rich	Low_complexity	1	64	(0)	1190225
15	31.8	0.0	0.0	chr14	63853205	63853262	(43190456)	+	G-rich	Low_complexity	1	58	(0)	1190226
21	20.1	3.0	2.9	chr14	64465366	64465431	(42578287)	+	(CCCCG)n	Simple_repeat	1	68	(0)	1191351
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
514	29.0	10.6	4.5	chr14	65817188	65817364	(41226354)	+	MIRb	SINE/MIR	14	202	(66)	1193751
1139	25.6	13.5	6.4	chr14	66641817	66642088	(40401630)	+	L1ME3A	LINE/L1	5659	5911	(1326)	1194871
2223	23.8	4.2	2.6	chr14	66642089	66642704	(40401014)	+	MLT1E2	LTR/ERVL-MaLR	1	626	(1)	1194874
463	25.5	14.7	2.5	chr14	66795148	66795578	(40248140)	C	L1MEg2	LINE/L1	(3705)	3749	3263	1195062
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
6281	22.8	4.7	3.3	chr14	68426377	68427835	(38615883)	+	MSTD-int	LTR/ERVL-MaLR	256	1735	(0)	1197685
8247	7.9	15.5	14.6	chr14	70254544	70254943	(36788775)	+	LTR12C	LTR/ERV1	4	445	(1134)	1200924
204	31.5	0.0	0.0	chr14	70359196	70359249	(36684469)	+	MIRb	SINE/MIR	117	170	(98)	1201066
3592	11.9	7.1	3.7	chr14	73562186	73563261	(33480457)	+	MER11A	LTR/ERVK	1	1232	(4)	1206565
728	11.3	5.4	1.6	chr14	73613153	73613276	(33430442)	C	FRAM	SINE/Alu	(26)	150	22	1206676
17	19.8	0.0	2.3	chr14	74019488	74019530	(33024188)	+	(AAGGCA)n	Simple_repeat	1	43	(0)	1207613
190	29.7	5.9	0.0	chr14	75307737	75307800	(31735918)	+	MIRc	SINE/MIR	112	179	(89)	1210172
557	28.2	3.7	2.2	chr14	75435554	75435738	(31607980)	+	MIR3	SINE/MIR	20	207	(1)	1210455
5158	16.2	4.5	2.7	chr14	75482285	75482303	(31561415)	+	L1MC2	LINE/L1	6325	6343	(1)	1210543
4434	21.4	7.2	7.0	chr14	75482363	75483091	(31560627)	C	MLT1A1-int	LTR/ERVL-MaLR	(497)	1238	521	1210545
332	24.7	12.8	6.8	chr14	75661899	75662059	(31381659)	+	L1ME4a	LINE/L1	5950	6121	(3)	1210881
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
24	13.6	3.3	3.2	chr14	75982659	75982718	(31061000)	+	G-rich	Low_complexity	1	62	(0)	1211418
4464	16.1	2.5	1.2	chr14	77091327	77091655	(29952063)	C	MER72B	LTR/ERV1	(5)	763	430	1213600
4586	13.9	6.3	5.1	chr14	77091656	77092114	(29951604)	C	LTR8B	LTR/ERV1	(0)	820	311	1213601
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
2342	19.1	1.4	0.9	chr14	80123908	80124331	(26919387)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1218779
294	24.1	3.5	0.0	chr14	80124332	80124414	(26919304)	C	MLT1C	LTR/ERVL-MaLR	(376)	91	6	1218778
16	9.6	2.7	5.3	chr14	81220663	81220699	(25823019)	+	GA-rich	Low_complexity	1	38	(0)	1220300
14	17.1	7.1	3.3	chr14	81220829	81220884	(25822834)	+	(CCGCTG)n	Simple_repeat	1	60	(0)	1220301
18	7.7	0.0	0.0	chr14	81220926	81220953	(25822765)	+	(GCC)n	Simple_repeat	1	28	(0)	1220302
29	0.0	0.0	3.1	chr14	81436222	81436253	(25607465)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	1220623
2314	10.6	0.0	0.7	chr14	91162977	91163279	(15880439)	+	AluSx	SINE/Alu	2	302	(10)	1235204
492	22.9	11.4	0.0	chr14	91163697	91163857	(15879861)	+	MIRb	SINE/MIR	48	254	(8)	1235205
18	28.3	1.0	5.9	chr14	91510623	91510722	(15532996)	+	(CGGCCC)n	Simple_repeat	1	101	(0)	1235829
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
27	18.8	0.0	3.1	chr14	99603435	99603498	(7440220)	+	(GCC)n	Simple_repeat	1	64	(0)	1250257
247	24.1	0.0	0.0	chr14	101964237	101964294	(5079424)	C	L2b	LINE/L2	(45)	3330	3273	1253965
13	7.2	3.0	5.9	chr14	101964492	101964524	(5079194)	+	G-rich	Low_complexity	1	34	(0)	1253966
14	14.9	5.4	0.0	chr14	102086933	102086969	(4956749)	+	(CCCCAGT)n	Simple_repeat	1	39	(0)	1254193
4627	18.9	4.1	6.4	chr14	105131090	105131880	(1911838)	+	LTR57-int	LTR/ERVL	793	1590	(3753)	1259314
3784	17.2	6.7	6.6	chr14	105131106	105131905	(1911813)	+	LOR1-int	LTR/ERV1	780	1584	(6536)	1259313
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
233	28.2	9.9	3.0	chr15	29140054	29140221	(72850968)	+	LTR33A	LTR/ERVL	322	502	(18)	1275018
550	31.0	5.0	15.7	chr15	31163971	31164117	(70827072)	+	L1M5	LINE/L1	3595	3743	(2403)	1278198
1344	12.4	22.6	0.0	chr15	31164118	31164350	(70826839)	+	AluSz	SINE/Alu	1	301	(11)	1278199
550	31.0	5.0	15.7	chr15	31164351	31164899	(70826290)	+	L1M5	LINE/L1	3744	4160	(1986)	1278198
2375	8.0	1.3	0.0	chr15	35078897	35079195	(66911994)	C	AluSc	SINE/Alu	(6)	303	1	1283924
12	26.4	0.0	5.5	chr15	40323531	40323585	(61667604)	+	(GGCTCCC)n	Simple_repeat	1	55	(0)	1291015
252	29.1	8.5	0.0	chr15	40694881	40694966	(61296223)	+	SVA_A	Retroposon/SVA	218	311	(1076)	1291741
528	14.0	0.0	0.0	chr15	40694892	40695002	(61296187)	C	FRAM	SINE/Alu	(81)	221	1	1291742
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
538	27.1	13.7	0.5	chr15	40807895	40808104	(61183085)	+	MIRc	SINE/MIR	4	240	(28)	1291969
19	4.0	0.0	0.0	chr15	44537197	44537222	(57453967)	+	(GGC)n	Simple_repeat	1	26	(0)	1299120
20	8.6	5.4	0.0	chr15	47717493	47717529	(54273660)	+	(TGC)n	Simple_repeat	1	39	(0)	1303776
17	13.1	0.0	0.0	chr15	47717647	47717672	(54273517)	+	(T)n	Simple_repeat	1	26	(0)	1303777
227	20.4	6.9	0.0	chr15	49495234	49495287	(52495902)	C	MamRep605	LTR?	(352)	497	440	1306329
21	13.8	2.4	0.0	chr15	52790013	52790038	(49201151)	+	(CT)n	Simple_repeat	1	27	(0)	1311888
35	8.9	0.0	0.0	chr15	52790039	52790086	(49201103)	+	(GT)n	Simple_repeat	1	48	(0)	1311889
21	13.8	2.4	0.0	chr15	52790087	52790100	(49201089)	+	(CT)n	Simple_repeat	2	15	(0)	1311890
20	23.2	0.0	7.4	chr15	52790363	52790443	(49200746)	+	(GCC)n	Simple_repeat	1	81	(0)	1311891
12	20.8	6.7	0.0	chr15	55587939	55587983	(46403206)	+	(GCTGCG)n	Simple_repeat	1	48	(0)	1315824
18	30.6	0.0	0.0	chr15	55588184	55588243	(46402946)	+	(CGC)n	Simple_repeat	1	60	(0)	1315825
19	12.0	4.1	3.9	chr15	55588493	55588541	(46402648)	+	(CGCCTC)n	Simple_repeat	1	51	(0)	1315826
30	15.3	1.7	0.0	chr15	55993613	55993670	(45997519)	+	GA-rich	Low_complexity	1	59	(0)	1316534
4095	19.8	25.3	1.1	chr15	56618666	56619178	(45372011)	C	L1MEc	LINE/L1	(4699)	2026	1303	1317339
1814	17.1	5.6	0.0	chr15	56619179	56619345	(45371844)	C	AluJb	SINE/Alu	(9)	303	137	1317340
31	3.0	0.0	0.0	chr15	56619346	56619379	(45371810)	+	(T)n	Simple_repeat	1	34	(0)	1317341
1814	17.1	5.6	0.0	chr15	56619380	56619498	(45371691)	C	AluJb	SINE/Alu	(193)	119	1	1317340
12	20.1	2.9	0.0	chr15	56733162	56733195	(45257994)	+	GA-rich	Low_complexity	1	35	(0)	1317504
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
12	22.6	4.3	5.6	chr15	58933159	58933227	(43057962)	+	(GCGGTGGC)n	Simple_repeat	1	72	(0)	1321105
265	18.2	7.2	7.2	chr15	59813076	59813158	(42178031)	C	MLT1H2	LTR/ERVL-MaLR	(346)	143	61	1322787
33	0.0	0.0	0.0	chr15	60592630	60592660	(41398529)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	1324035
9561	10.3	7.9	6.5	chr15	62398423	62399978	(39591211)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1326840
3458	12.5	4.9	3.5	chr15	63242789	63243309	(38747880)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1328222
456	23.5	0.0	8.7	chr15	63243601	63243726	(38747463)	+	MER5B	DNA/hAT-Charlie	16	130	(48)	1328223
1485	23.8	4.1	4.8	chr15	63243747	63244143	(38747046)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	1328224
12	23.3	3.7	3.6	chr15	64163069	64163122	(37828067)	+	G-rich	Low_complexity	1	56	(0)	1329876
13	13.3	2.7	5.3	chr15	64388290	64388326	(37602863)	+	(TTA)n	Simple_repeat	1	38	(0)	1330273
2134	8.9	1.4	0.7	chr15	64388327	64388606	(37602583)	C	AluSz	SINE/Alu	(28)	284	3	1330274
41	12.2	4.2	4.0	chr15	64775580	64775675	(37215514)	+	(CGG)n	Simple_repeat	1	100	(0)	1331159
15	6.9	0.0	8.3	chr15	64775773	64775808	(37215381)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1331160
16	22.6	3.0	4.3	chr15	65378054	65378060	(36613129)	+	(CCCTCTC)n	Simple_repeat	1	28	(41)	1332492
16	22.7	1.9	1.9	chr15	65378061	65378113	(36613076)	+	(CCCCAGC)n	Simple_repeat	1	54	(0)	1332493
16	22.6	3.0	4.3	chr15	65378114	65378120	(36613069)	+	(CCCTCTC)n	Simple_repeat	29	69	(0)	1332492
44	0.0	0.0	0.0	chr15	65422520	65422557	(36568632)	+	(AC)n	Simple_repeat	1	38	(0)	1332585
23	12.0	4.4	0.0	chr15	65422877	65422921	(36568268)	+	(GCC)n	Simple_repeat	1	47	(0)	1332586
25	24.4	0.9	6.4	chr15	66253680	66253702	(35737487)	+	(GCGGCGG)n	Simple_repeat	1	61	(49)	1334276
13	25.6	5.7	2.7	chr15	66253703	66253772	(35737417)	+	(GCGG)n	Simple_repeat	1	74	(0)	1334277
25	24.4	0.9	6.4	chr15	66253773	66253788	(35737401)	+	(GCGGCGG)n	Simple_repeat	62	110	(0)	1334276
23	21.7	3.5	4.4	chr15	66253803	66253904	(35737285)	+	(TCCC)n	Simple_repeat	1	100	(0)	1334278
188	26.9	3.1	13.1	chr15	66356305	66356411	(35634778)	C	L2c	LINE/L2	(1)	3386	3291	1334509
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
14	21.3	1.9	5.5	chr15	68306892	68306945	(33684244)	+	(CTTT)n	Simple_repeat	1	55	(0)	1338105
16147	6.4	1.4	2.3	chr15	69335706	69337814	(32653375)	+	HUERS-P1-int	LTR/ERV1	3716	5802	(461)	1340016
2445	27.8	7.5	3.5	chr15	70039450	70041515	(31949674)	C	L1ME3Cz	LINE/L1	(743)	5403	4080	1341379
324	30.0	10.4	3.7	chr15	70100887	70101073	(31890116)	C	MIRb	SINE/MIR	(20)	248	48	1341467
3350	20.8	6.7	2.5	chr15	70908206	70908990	(31082199)	C	LTR8B	LTR/ERV1	(0)	820	1	1342951
2372	20.2	7.7	5.0	chr15	71307786	71308286	(30682903)	C	MER77	LTR/ERVL	(70)	534	9	1343524
298	20.6	3.9	0.0	chr15	71308499	71308576	(30682613)	C	L1MB5	LINE/L1	(0)	6174	6093	1343526
18	30.1	0.0	1.6	chr15	72117939	72118001	(29873188)	+	(CCG)n	Simple_repeat	1	63	(0)	1344929
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
16	23.9	0.0	0.0	chr15	75201839	75201873	(26789316)	+	(C)n	Simple_repeat	1	35	(0)	1350396
20	13.2	0.0	4.4	chr15	75201874	75201881	(26789308)	+	(CGCCC)n	Simple_repeat	3	45	(0)	1350397
18	16.4	2.4	0.0	chr15	75454670	75454710	(26536479)	+	(CGCGCC)n	Simple_repeat	1	42	(0)	1350823
14	27.3	3.5	0.0	chr15	75578551	75578607	(26412582)	+	G-rich	Low_complexity	1	59	(0)	1351122
274	31.4	4.8	7.3	chr15	75626243	75626393	(26364796)	+	L2b	LINE/L2	3221	3367	(8)	1351238
310	29.1	6.0	9.5	chr15	75626484	75626673	(26364516)	C	MIRb	SINE/MIR	(0)	268	86	1351239
17	26.4	0.0	0.0	chr15	75647818	75647867	(26343322)	+	(CTCCTCC)n	Simple_repeat	1	50	(0)	1351301
12	11.6	3.3	3.2	chr15	75648019	75648048	(26343141)	+	(GGAC)n	Simple_repeat	1	31	(0)	1351302
12	18.9	7.1	0.0	chr15	75738638	75738679	(26252510)	+	(GCCCCA)n	Simple_repeat	1	45	(0)	1351436
1623	25.5	7.6	3.3	chr15	76262781	76262956	(25728233)	+	L1MEf	LINE/L1	2098	2297	(4740)	1352274
1736	8.9	3.5	9.3	chr15	76262993	76263324	(25727865)	+	LTR14A	LTR/ERVK	46	608	(0)	1352289
29907	6.3	1.4	0.6	chr15	76263325	76266621	(25724568)	+	HERVK14-int	LTR/ERVK	1	3336	(2760)	1352289
12	20.2	3.5	6.7	chr15	78811266	78811323	(23179866)	+	(GTCCG)n	Simple_repeat	1	60	(0)	1356625
25	11.8	0.0	4.0	chr15	78811423	78811472	(23179717)	+	A-rich	Low_complexity	1	50	(0)	1356626
25	23.8	0.0	3.8	chr15	78811499	78811582	(23179607)	+	(CCCCG)n	Simple_repeat	1	80	(0)	1356627
16	4.5	0.0	0.0	chr15	80989715	80989737	(21001452)	+	(AGC)n	Simple_repeat	1	23	(0)	1360490
181	24.6	8.8	4.0	chr15	80990145	80990220	(21000969)	+	MIR3	SINE/MIR	108	187	(21)	1360491
19	17.7	0.0	10.3	chr15	82680391	82680468	(19310721)	+	G-rich	Low_complexity	1	78	(0)	1363260
2101	15.1	1.8	8.6	chr15	82907823	82908308	(19082881)	+	L1MB8	LINE/L1	5718	6169	(9)	1363653
1319	16.3	7.3	2.0	chr15	82908311	82908724	(19082465)	+	LTR54	LTR/ERV1	7	431	(3)	1363654
13	13.1	2.7	5.3	chr15	82952719	82952755	(19038434)	+	(GCGG)n	Simple_repeat	1	38	(0)	1363737
412	21.8	11.4	1.0	chr15	82953017	82953118	(19038071)	C	MIR3	SINE/MIR	(21)	187	74	1363738
26	0.0	0.0	0.0	chr15	83207683	83207707	(18783482)	+	(CCG)n	Simple_repeat	1	25	(0)	1364239
13	21.8	1.9	5.6	chr15	83207867	83207877	(18783312)	+	(CCCCG)n	Simple_repeat	1	28	(26)	1364240
18	0.0	11.8	0.0	chr15	83207878	83207911	(18783278)	+	(CCCGCTT)n	Simple_repeat	1	38	(0)	1364241
13	21.8	1.9	5.6	chr15	83207912	83207919	(18783270)	+	(CCCCG)n	Simple_repeat	29	54	(0)	1364240
1877	9.4	2.3	10.3	chr15	83439192	83439383	(18551806)	C	AluSz6	SINE/Alu	(8)	304	131	1364631
36	8.6	1.6	1.5	chr15	84143269	84143332	(17847857)	+	(GGCA)n	Simple_repeat	1	65	(0)	1365650
28	22.4	0.0	6.9	chr15	84716616	84716716	(17274473)	+	(CTTT)n	Simple_repeat	1	101	(0)	1366485
2310	9.2	2.9	0.0	chr15	84716719	84717021	(17274168)	C	AluSx	SINE/Alu	(0)	312	1	1366486
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
14	18.2	0.0	0.0	chr15	84981965	84982000	(17009189)	+	(CCG)n	Simple_repeat	1	36	(0)	1367058
4758	16.7	0.8	2.4	chr15	85408290	85409164	(16582025)	C	L1MB3	LINE/L1	(5)	6178	5316	1367781
916	30.1	7.2	0.5	chr15	89655821	89656194	(12334995)	+	Kanga11a	DNA/TcMar-Tc2	6	406	(564)	1374629
2424	8.5	0.0	2.2	chr15	90102977	90103293	(11887896)	+	AluSz	SINE/Alu	1	310	(2)	1375601
195	35.5	8.8	5.6	chr15	90932757	90932953	(11058236)	C	L2c	LINE/L2	(47)	3340	3137	1377370
228	22.2	3.6	0.0	chr15	93073540	93073593	(8917596)	C	MamRep1879	DNA/hAT-Tip100?	(130)	86	31	1380954
303	35.4	6.6	4.3	chr15	93358064	93358435	(8632754)	C	Charlie19a	DNA/hAT-Charlie	(4)	382	2	1381523
2290	8.4	1.0	0.7	chr15	95540954	95541250	(6449939)	+	AluSx1	SINE/Alu	3	300	(12)	1384597
283	31.3	9.3	5.8	chr15	98677461	98677738	(3313451)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	224	1389030
27	21.3	0.0	0.0	chr15	99058951	99059004	(2932185)	+	(C)n	Simple_repeat	1	54	(0)	1389538
6642	24.5	9.4	7.0	chr15	99588743	99592187	(2399002)	C	L1ME2	LINE/L1	(1)	6516	641	1390336
948	24.7	3.7	2.5	chr15	99592384	99592482	(2398707)	+	MER33	DNA/hAT-Charlie	1	99	(225)	1390340
18	24.8	0.0	2.2	chr15	99790753	99790798	(2200391)	+	(AC)n	Simple_repeat	1	46	(0)	1390626
1103	17.3	0.0	0.0	chr15	99791246	99791401	(2199788)	+	7SLRNA	srpRNA	94	249	(71)	1390627
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
26	0.0	0.0	0.0	chr15	101724604	101724628	(266561)	+	(GGGGC)n	Simple_repeat	1	25	(0)	1393181
5212	12.1	22.1	0.7	chr15	101979520	101980763	(10426)	+	TAR1	Satellite/telo	483	2068	(43)	1393518
328	3.1	1.9	3.2	chr15	101980765	101981189	(10000)	+	(GGTTAG)n	Simple_repeat	1	433	(0)	1393519
40	5.5	3.5	0.0	chr16	10001	10057	(90328288)	+	(TAACCC)n	Simple_repeat	1	59	(0)	1394055
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
184	29.2	1.5	0.0	chr16	741340	741404	(89596941)	+	L2b	LINE/L2	3294	3359	(16)	1395135
2572	5.6	0.0	0.0	chr16	741569	741870	(89596475)	C	AluY	SINE/Alu	(9)	302	1	1395136
12	13.1	2.7	5.3	chr16	2047761	2047797	(88290548)	+	(CGGCTC)n	Simple_repeat	1	38	(0)	1396835
231	17.9	0.0	0.0	chr16	2832969	2833007	(87505338)	+	MLT1D	LTR/ERVL-MaLR	467	505	(0)	1397994
345	31.2	6.7	1.3	chr16	2833937	2834092	(87504253)	C	MIR	SINE/MIR	(81)	181	17	1397995
14	22.7	0.0	2.3	chr16	4253899	4253941	(86084404)	+	G-rich	Low_complexity	1	43	(0)	1400765
15	0.0	0.0	4.3	chr16	4272286	4272308	(86066037)	+	(AGGA)n	Simple_repeat	1	23	(0)	1400802
15	4.1	4.0	0.0	chr16	11976693	11976717	(78361628)	+	(CGGGG)n	Simple_repeat	1	26	(0)	1416959
17	22.2	3.4	1.6	chr16	11976744	11976804	(78361541)	+	(GCGGCA)n	Simple_repeat	1	62	(0)	1416960
1395	26.6	11.2	6.5	chr16	12732530	12733274	(77605071)	+	HAL1	LINE/L1	1269	2165	(342)	1418494
1296	24.7	8.0	3.2	chr16	13865802	13865968	(76472377)	+	L1ME3Cz	LINE/L1	642	824	(173)	1421039
1124	28.2	11.2	1.9	chr16	13865969	13866455	(76471890)	C	LTR16E1	LTR/ERVL	(0)	538	1	1421041
1296	24.7	8.0	3.2	chr16	13866456	13866615	(76471730)	+	L1ME3Cz	LINE/L1	825	997	(0)	1421039
452	22.3	0.0	1.6	chr16	13866648	13866770	(76471575)	+	L1ME3Cz	LINE/L1	854	974	(23)	1421042
346	31.9	12.7	3.9	chr16	15794536	15794965	(74543380)	C	L2a	LINE/L2	(92)	3334	2851	1425237
11	13.0	8.8	0.0	chr16	21520236	21520269	(68818076)	+	(CGCCCT)n	Simple_repeat	1	37	(0)	1438058
644	24.6	7.6	2.8	chr16	23647817	23648105	(66690240)	C	L1ME3F	LINE/L1	(0)	6243	5940	1442779
16	16.5	6.1	1.9	chr16	23648112	23648160	(66690185)	+	(ATTT)n	Simple_repeat	1	52	(0)	1442780
989	18.3	0.0	4.8	chr16	23648167	23648327	(66690018)	C	AluJb	SINE/Alu	(23)	289	134	1442781
1972	14.9	0.0	0.0	chr16	23648328	23648649	(66689696)	C	AluSz	SINE/Alu	(0)	312	1	1442782
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
533	28.7	13.7	1.0	chr16	28210879	28211099	(62127246)	+	MIR	SINE/MIR	16	267	(1)	1452864
215	27.7	15.1	1.0	chr16	29791036	29791137	(60547208)	+	MIR1_Amn	SINE/MIR	39	157	(73)	1456580
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
23	19.8	1.4	4.3	chr16	30095999	30096067	(60242278)	+	G-rich	Low_complexity	1	70	(0)	1457251
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
1422	20.6	1.7	1.6	chr16	30096876	30097207	(60241138)	+	LTR10B2	LTR/ERV1	187	503	(0)	1457253
2301	6.9	0.3	0.3	chr16	31117090	31117369	(59220976)	+	AluSc	SINE/Alu	1	280	(29)	1459638
34	0.0	0.0	0.0	chr16	31117370	31117401	(59220944)	+	(AAAT)n	Simple_repeat	1	32	(0)	1459639
12	14.1	3.5	10.0	chr16	31117897	31117954	(59220391)	+	G-rich	Low_complexity	1	60	(0)	1459640
888	6.7	4.2	0.7	chr16	33335914	33335926	(57002419)	C	LTR13A	LTR/ERVK	(825)	141	127	1462584
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
2764	17.2	6.7	8.1	chr16	46789662	46789893	(43548452)	+	L1MA8	LINE/L1	3276	3497	(3229)	1466047
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
236	28.8	1.5	1.5	chr16	47038395	47038461	(43299884)	+	MIR	SINE/MIR	82	148	(114)	1466606
529	16.0	3.1	1.1	chr16	47038474	47038567	(43299778)	+	AluJr	SINE/Alu	187	282	(30)	1466607
7567	15.2	6.3	2.0	chr16	47387769	47388689	(42949656)	+	L1M4b	LINE/L1	1347	2296	(4571)	1467110
1671	19.9	2.6	0.6	chr16	47492860	47493193	(42845152)	C	MER61A	LTR/ERV1	(0)	341	1	1467253
2612	20.0	5.2	1.7	chr16	47493218	47494198	(42844147)	C	ERV24_Prim-int	LTR/ERV1	(6240)	1335	1	1467254
805	25.2	10.2	1.6	chr16	48374304	48374606	(41963739)	+	HAL1	LINE/L1	1480	1811	(696)	1468625
231	28.3	5.1	4.6	chr16	48374652	48374847	(41963498)	+	HAL1	LINE/L1	1954	2150	(357)	1468625
290	22.8	11.2	0.0	chr16	48374917	48375043	(41963302)	+	HAL1	LINE/L1	2240	2382	(125)	1468625
6860	19.2	15.1	7.5	chr16	50441059	50442669	(39895676)	+	MER52A	LTR/ERV1	1	1755	(0)	1472494
12	14.8	0.0	5.9	chr16	54286156	54286189	(36052156)	+	(GCTGC)n	Simple_repeat	1	34	(0)	1479231
21	9.8	0.0	0.0	chr16	54286211	54286243	(36052102)	+	(GCG)n	Simple_repeat	1	33	(0)	1479232
24	23.2	7.4	2.3	chr16	54286378	54286498	(36051847)	+	(CGCTCCT)n	Simple_repeat	1	130	(0)	1479233
2109	8.9	0.0	0.0	chr16	56963986	56964326	(33374019)	C	AluSx1	SINE/Alu	(0)	312	1	1484063
1300	15.3	15.3	0.0	chr16	56964854	56965102	(33373243)	+	AluJb	SINE/Alu	1	294	(18)	1484064
12	23.8	0.0	6.0	chr16	58001348	58001397	(32336948)	+	(CCGCC)n	Simple_repeat	1	50	(0)	1486244
12	23.3	2.5	0.0	chr16	58001525	58001564	(32336781)	+	(CGAGGA)n	Simple_repeat	1	41	(0)	1486245
21	20.2	0.0	4.8	chr16	58025806	58025867	(32312478)	+	(CGCT)n	Simple_repeat	1	62	(0)	1486285
14	17.0	3.0	0.0	chr16	58026435	58026467	(32311878)	+	(CTG)n	Simple_repeat	1	34	(0)	1486286
319	10.8	5.8	3.0	chr16	66873530	66873596	(23464749)	C	MIRc	SINE/MIR	(140)	128	60	1500596
19	12.9	0.0	2.7	chr16	68085612	68085648	(22252697)	+	(GCC)n	Simple_repeat	1	37	(0)	1502902
11	24.2	5.5	1.7	chr16	68085649	68085665	(22252680)	+	(AGCTGC)n	Simple_repeat	2	58	(0)	1502903
19	15.8	2.8	0.0	chr16	68085887	68085922	(22252423)	+	(TG)n	Simple_repeat	1	37	(0)	1502904
12	8.1	3.6	3.5	chr16	68245583	68245610	(22092735)	+	G-rich	Low_complexity	1	29	(0)	1503223
232	20.0	5.8	3.0	chr16	68613727	68613793	(21724552)	+	MER91B	DNA/hAT-Tip100	35	103	(87)	1503883
1249	23.4	10.3	8.0	chr16	68613795	68613941	(21724404)	+	L1ME4b	LINE/L1	129	322	(570)	1503884
1195	27.4	18.1	1.4	chr16	68613942	68614456	(21723889)	+	LTR67B	LTR/ERVL	1	620	(0)	1503885
2019	15.1	0.0	0.3	chr16	68731559	68731857	(21606488)	+	AluJb	SINE/Alu	5	302	(10)	1504194
13	14.0	4.7	4.4	chr16	68731864	68731906	(21606439)	+	A-rich	Low_complexity	1	45	(0)	1504195
2415	7.5	0.0	0.3	chr16	70164893	70165187	(20173158)	C	AluSc5	SINE/Alu	(15)	294	1	1507363
16	17.3	8.1	3.0	chr16	70251620	70251681	(20086664)	+	(CCG)n	Simple_repeat	1	67	(0)	1507543
23	6.0	0.0	2.7	chr16	70438648	70438684	(19899661)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	1507977
14	23.2	2.1	2.1	chr16	70438961	70439007	(19899338)	+	(CCG)n	Simple_repeat	1	48	(0)	1507978
28	3.3	0.0	0.0	chr16	70439018	70439048	(19899297)	+	(GCC)n	Simple_repeat	1	31	(0)	1507979
10981	22.2	9.1	7.7	chr16	72672888	72673502	(17664843)	+	L1MB4	LINE/L1	1377	2043	(4704)	1511843
273	19.7	3.2	0.0	chr16	72673503	72673563	(17664782)	+	U7	snRNA	1	63	(0)	1511845
10981	22.2	9.1	7.7	chr16	72673564	72674396	(17663949)	+	L1MB4	LINE/L1	2044	2949	(3798)	1511843
20	6.5	0.0	2.9	chr16	73096162	73096195	(17242150)	+	(CTGC)n	Simple_repeat	1	34	(0)	1512405
2000	13.1	0.3	4.5	chr16	73096403	73096714	(17241631)	C	AluSz	SINE/Alu	(12)	300	2	1512406
721	26.3	10.0	1.4	chr16	74695887	74696299	(15642046)	+	MLT1J2	LTR/ERVL-MaLR	4	428	(20)	1515244
623	8.2	4.9	0.0	chr16	74776909	74777005	(15561340)	+	L1MB4	LINE/L1	6079	6180	(0)	1515423
278	2.9	0.0	0.0	chr16	74777079	74777113	(15561232)	+	MER58A	DNA/hAT-Charlie	42	76	(148)	1515424
802	14.9	0.6	7.5	chr16	74777161	74777348	(15560997)	+	MER96B	DNA/hAT-Tip100	243	417	(0)	1515425
1335	19.0	0.3	13.6	chr16	74777497	74777644	(15560701)	+	AluJb	SINE/Alu	1	125	(187)	1515426
1915	19.2	5.2	7.3	chr16	75742322	75743168	(14595177)	+	MER4-int	LTR/ERV1	2798	3730	(2868)	1517398
16	8.2	0.0	0.0	chr16	82170264	82170289	(8168056)	+	(CGCCC)n	Simple_repeat	1	26	(0)	1528775
276	30.8	1.8	9.8	chr16	83891732	83891869	(6446476)	C	L2c	LINE/L2	(2)	3424	3288	1531798
281	23.3	12.1	0.0	chr16	83891895	83891967	(6446378)	+	L1M5	LINE/L1	5568	5650	(592)	1531799
472	23.6	6.0	2.1	chr16	83891970	83892112	(6446233)	+	MER5B	DNA/hAT-Charlie	3	151	(27)	1531800
237	19.5	0.0	0.0	chr16	83892128	83892168	(6446177)	C	MER5B	DNA/hAT-Charlie	(78)	100	60	1531801
1950	15.2	0.0	2.3	chr16	84020139	84020447	(6317898)	C	AluJr	SINE/Alu	(10)	302	1	1532041
4553	26.0	15.1	5.0	chr16	84020448	84021081	(6317264)	C	MSTC-int	LTR/ERVL-MaLR	(693)	1042	413	1532037
14	12.4	2.6	5.0	chr16	84116591	84116629	(6221716)	+	(GCCCCC)n	Simple_repeat	1	40	(0)	1532174
19	18.8	6.5	1.5	chr16	84145111	84145172	(6193173)	+	(CCG)n	Simple_repeat	1	66	(0)	1532219
577	23.4	1.7	8.4	chr16	85461391	85461581	(4876764)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	1534886
250	32.4	1.8	0.0	chr16	85615770	85615880	(4722465)	+	MER5B	DNA/hAT-Charlie	46	158	(20)	1535146
14	8.1	0.0	3.6	chr16	86567211	86567238	(3771107)	+	(CCTCC)n	Simple_repeat	1	28	(0)	1536860
2119	11.3	0.0	0.3	chr16	89376438	89376738	(961607)	C	AluSx1	SINE/Alu	(12)	300	1	1541164
9943	15.6	7.2	5.7	chr16	89376739	89378071	(960274)	+	Tigger2	DNA/TcMar-Tigger	1161	2567	(151)	1541163
25	23.9	1.7	0.0	chr16	89489211	89489268	(849077)	+	(AC)n	Simple_repeat	1	59	(0)	1541346
11	16.9	2.9	2.8	chr16	89489367	89489401	(848944)	+	(CCGCCA)n	Simple_repeat	1	36	(0)	1541347
4886	16.3	5.9	0.3	chr16	90077712	90078611	(259734)	C	L1P4a	LINE/L1	(5083)	1420	468	1542332
1668	13.2	0.7	6.1	chr17	143334	143644	(83113797)	C	AluJb	SINE/Alu	(14)	298	5	1544682
23	7.0	4.1	3.9	chr17	144063	144111	(83113330)	+	(GGCGCGGC)n	Simple_repeat	1	51	(0)	1544683
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
3187	12.7	4.5	1.8	chr17	2484986	2485499	(80771942)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1549207
12	17.7	5.0	2.4	chr17	4584940	4584979	(78672462)	+	(CGCCA)n	Simple_repeat	1	42	(0)	1553355
16	19.6	5.6	1.8	chr17	4710664	4710717	(78546724)	+	(AGCG)n	Simple_repeat	1	57	(0)	1553589
12	19.7	2.3	4.4	chr17	4710763	4710806	(78546635)	+	G-rich	Low_complexity	1	45	(0)	1553590
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
2276	8.5	2.2	0.3	chr17	7306410	7306716	(75950725)	C	AluSp	SINE/Alu	(0)	313	1	1558608
14	12.8	0.0	7.5	chr17	7394560	7394599	(75862842)	+	(CCCCGC)n	Simple_repeat	1	40	(0)	1558758
481	27.1	13.9	6.9	chr17	7537720	7538139	(75719302)	+	MLT1N2	LTR/ERVL-MaLR	102	555	(7)	1559024
3158	18.0	6.6	2.8	chr17	7538200	7538472	(75718969)	C	LTR8B	LTR/ERV1	(7)	813	520	1559025
2673	18.6	10.5	4.0	chr17	7538473	7539076	(75718365)	+	LTR1C1	LTR/ERV1	1	648	(0)	1559026
22	9.8	0.0	7.8	chr17	9239979	9240029	(74017412)	+	(GCGG)n	Simple_repeat	1	51	(0)	1562290
13	24.4	0.0	2.2	chr17	9240074	9240118	(74017323)	+	G-rich	Low_complexity	1	45	(0)	1562291
222	20.0	0.0	0.0	chr17	11997717	11997761	(71259680)	C	MIRb	SINE/MIR	(14)	254	210	1567386
21	14.5	0.0	0.0	chr17	12020906	12020943	(71236498)	+	(GCG)n	Simple_repeat	1	38	(0)	1567443
2589	20.8	7.0	4.7	chr17	12831342	12831986	(70425455)	C	MER67B	LTR/ERV1	(0)	661	1	1568731
476	15.0	0.0	5.9	chr17	12831987	12832026	(70425415)	C	MER67A	LTR/ERV1	(463)	80	45	1568732
3855	17.5	0.6	7.0	chr17	12832027	12832765	(70424676)	C	LTR8	LTR/ERV1	(0)	691	1	1568733
3370	23.7	9.0	2.4	chr17	13207816	13209471	(70047970)	+	HAL1ME	LINE/L1	12	2328	(4709)	1569398
11196	10.9	0.6	0.9	chr17	13209516	13211380	(70046061)	C	L1PA13	LINE/L1	(630)	5531	3669	1569399
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
4433	22.3	5.5	2.8	chr17	16986217	16986884	(66270557)	+	MSTD-int	LTR/ERVL-MaLR	411	1108	(627)	1575881
481	27.4	16.4	3.9	chr17	16986895	16987405	(66270036)	+	L2a	LINE/L2	2544	3175	(251)	1575880
41	9.7	1.5	0.0	chr17	18039406	18039471	(65217970)	+	(GT)n	Simple_repeat	1	67	(0)	1577827
14	25.7	0.0	5.4	chr17	18039735	18039790	(65217651)	+	(CCG)n	Simple_repeat	1	56	(0)	1577828
662	26.7	9.2	1.9	chr17	18857720	18857887	(64399554)	C	MIRb	SINE/MIR	(65)	203	22	1579271
17	15.3	2.7	0.0	chr17	18858222	18858258	(64399183)	+	G-rich	Low_complexity	1	38	(0)	1579274
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
277	25.8	3.1	1.1	chr17	21284144	21284237	(61973204)	C	MIRb	SINE/MIR	(118)	150	55	1584005
13	9.8	0.0	10.0	chr17	21284350	21284389	(61973052)	+	G-rich	Low_complexity	1	40	(0)	1584006
29	0.0	0.0	0.0	chr17	21284781	21284807	(61972634)	+	(CGC)n	Simple_repeat	1	27	(0)	1584007
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
12	25.6	2.4	0.0	chr17	28552222	28552263	(54705178)	+	G-rich	Low_complexity	1	43	(0)	1588900
14	21.5	4.0	1.9	chr17	28552640	28552689	(54704752)	+	(CCCCGC)n	Simple_repeat	1	52	(0)	1588901
389	31.4	16.8	0.3	chr17	28552900	28553186	(54704255)	+	L2a	LINE/L2	3059	3405	(21)	1588902
32	12.1	3.9	3.8	chr17	28726266	28726342	(54531099)	+	(GCCCCC)n	Simple_repeat	1	80	(0)	1589203
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
12	25.6	0.0	0.0	chr17	31384536	31384572	(51872869)	+	(TCTTTTA)n	Simple_repeat	1	37	(0)	1594463
2113	11.4	1.4	2.0	chr17	31384802	31384941	(51872500)	+	AluSq2	SINE/Alu	1	137	(176)	1594464
879	15.3	13.8	0.0	chr17	31949525	31949661	(51307780)	C	AluSx1	SINE/Alu	(17)	295	137	1595709
2046	13.7	1.8	0.0	chr17	31949677	31949982	(51307459)	C	AluSz	SINE/Alu	(0)	312	1	1595710
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
23	24.4	0.0	8.8	chr17	32928028	32928141	(50329300)	+	G-rich	Low_complexity	1	114	(0)	1597648
16	21.9	4.0	5.1	chr17	32928261	32928336	(50329105)	+	G-rich	Low_complexity	1	79	(0)	1597649
2228	21.1	7.2	1.2	chr17	35164201	35164719	(48092722)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	17	1601846
21	21.7	6.4	2.4	chr17	37406832	37406909	(45850532)	+	(GC)n	Simple_repeat	1	83	(0)	1605792
28	21.3	3.8	8.4	chr17	37406970	37407129	(45850312)	+	G-rich	Low_complexity	1	166	(0)	1605793
16	7.4	0.0	6.1	chr17	38674846	38674882	(44582559)	+	(CCCGGG)n	Simple_repeat	1	34	(0)	1608325
14	23.1	0.0	0.0	chr17	38675119	38675154	(44582287)	+	G-rich	Low_complexity	1	36	(0)	1608326
181	31.4	3.8	4.7	chr17	38675218	38675324	(44582117)	+	MIRc	SINE/MIR	101	206	(62)	1608327
2505	7.1	0.0	0.0	chr17	40253066	40253361	(43004080)	C	AluY	SINE/Alu	(15)	296	1	1611699
15	13.4	7.3	0.0	chr17	40363411	40363451	(42893990)	+	(GCGGCGC)n	Simple_repeat	1	44	(0)	1611884
260	34.5	4.5	8.9	chr17	41667243	41667567	(41589874)	C	L2b	LINE/L2	(42)	3333	3024	1613991
15	14.3	1.6	1.6	chr17	41786597	41786641	(41470800)	+	G-rich	Low_complexity	1	45	(0)	1614292
28	19.9	2.6	2.5	chr17	41865324	41865401	(41392040)	+	(GCC)n	Simple_repeat	1	80	(0)	1614463
504	19.0	10.7	3.7	chr17	41966327	41966490	(41290951)	C	MER96B	DNA/hAT-Tip100	(0)	417	241	1614687
17	12.1	0.0	5.0	chr17	42609505	42609544	(40647897)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	1615974
12	13.9	0.0	8.1	chr17	42609671	42609707	(40647734)	+	(GGCG)n	Simple_repeat	1	37	(0)	1615975
2176	11.2	0.3	0.7	chr17	43006190	43006493	(40250948)	C	AluSq2	SINE/Alu	(9)	304	2	1616866
246	26.6	3.6	2.5	chr17	43006494	43006574	(40250867)	C	L2a	LINE/L2	(6)	3420	3339	1616867
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
1105	29.5	9.2	4.5	chr17	43611643	43612129	(39645312)	+	MLT1J	LTR/ERVL-MaLR	1	512	(0)	1618235
1650	14.9	4.0	0.0	chr17	43702258	43702518	(39554923)	C	AluJo	SINE/Alu	(40)	272	1	1618439
864	29.3	3.7	0.8	chr17	43702743	43703007	(39554434)	+	MLT1K	LTR/ERVL-MaLR	89	361	(234)	1618440
2181	8.3	0.0	0.0	chr17	43937655	43937979	(39319462)	C	AluSx1	SINE/Alu	(0)	312	6	1618887
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
22	25.1	3.0	0.0	chr17	44199958	44200024	(39057417)	+	(CCT)n	Simple_repeat	1	69	(0)	1619433
1815	15.7	0.3	5.3	chr17	45129182	45129499	(38127942)	+	AluJo	SINE/Alu	11	312	(0)	1621406
218	32.4	0.9	9.0	chr17	45129500	45129554	(38127887)	+	MamRTE1	LINE/RTE-BovB	2458	2505	(1307)	1621404
428	29.5	8.5	4.3	chr17	45129555	45129706	(38127735)	+	MIRb	SINE/MIR	25	247	(21)	1621405
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
368	24.2	1.5	13.0	chr17	45371559	45371607	(37885834)	+	L1ME4b	LINE/L1	845	889	(3)	1621912
612	27.8	5.0	8.2	chr17	45372130	45372399	(37885042)	+	MER46C	DNA/TcMar-Tigger	78	338	(0)	1621918
2085	18.1	5.6	1.2	chr17	45731121	45731529	(37525912)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1622677
3199	19.1	11.4	4.3	chr17	45731607	45732188	(37525253)	C	LTR8B	LTR/ERV1	(16)	804	219	1622678
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
358	25.2	5.7	0.0	chr17	46842856	46842954	(36414487)	C	MIRc	SINE/MIR	(52)	216	112	1624824
275	31.8	0.7	5.4	chr17	47732875	47733015	(35524426)	C	L2c	LINE/L2	(199)	3188	3055	1626624
18	25.9	1.8	0.0	chr17	47733143	47733198	(35524243)	+	G-rich	Low_complexity	1	57	(0)	1626625
12	25.9	0.0	2.3	chr17	47733335	47733377	(35524064)	+	(CCCGCCC)n	Simple_repeat	1	43	(0)	1626626
2139	13.9	1.0	0.0	chr17	48005910	48006210	(35251231)	C	AluSz6	SINE/Alu	(7)	305	2	1627105
15	14.9	2.6	2.5	chr17	48101118	48101156	(35156285)	+	G-rich	Low_complexity	1	40	(0)	1627294
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
2309	10.0	0.7	0.0	chr17	48101669	48101969	(35155472)	+	AluSx1	SINE/Alu	1	303	(9)	1627296
26	0.0	0.0	0.0	chr17	49230741	49230765	(34026676)	+	(GGAGCC)n	Simple_repeat	1	25	(0)	1629472
18	0.0	0.0	0.0	chr17	49575651	49575672	(33681769)	+	(GCC)n	Simple_repeat	1	22	(0)	1630189
34	0.0	0.0	0.0	chr17	51166116	51166144	(32091297)	+	(TG)n	Simple_repeat	1	29	(0)	1633281
13	13.1	0.0	0.0	chr17	56833697	56833721	(26423720)	+	(CGG)n	Simple_repeat	1	25	(0)	1642079
12	20.1	6.2	2.0	chr17	56833757	56833804	(26423637)	+	(GCGGCGC)n	Simple_repeat	1	51	(0)	1642080
17	18.0	1.5	8.7	chr17	56978024	56978091	(26279350)	+	(CCCAGC)n	Simple_repeat	1	69	(0)	1642369
23	17.4	2.4	7.1	chr17	56978092	56978102	(26279339)	+	(CCGCC)n	Simple_repeat	4	84	(0)	1642370
16	31.3	5.3	0.0	chr17	56978129	56978222	(26279219)	+	(CTGCTG)n	Simple_repeat	1	99	(0)	1642371
2005	15.2	2.0	0.3	chr17	57224895	57225196	(26032245)	C	AluJb	SINE/Alu	(5)	307	1	1642920
3683	24.5	4.5	1.2	chr17	57225197	57225820	(26031621)	C	L1MEg	LINE/L1	(2447)	3699	3043	1642919
25	6.3	0.0	0.0	chr17	57987807	57987839	(25269602)	+	(GT)n	Simple_repeat	1	33	(0)	1644234
21	16.2	2.0	2.0	chr17	58083200	58083251	(25174190)	+	(CCCTCC)n	Simple_repeat	1	52	(0)	1644417
2244	9.9	0.7	0.3	chr17	58658388	58658680	(24598761)	C	AluSz	SINE/Alu	(8)	304	11	1645452
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
18	19.3	6.4	0.0	chr17	59964739	59964785	(23292656)	+	(GC)n	Simple_repeat	1	50	(0)	1648327
13	23.1	2.1	2.1	chr17	59964783	59964829	(23292612)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1648328
2298	10.3	0.0	0.6	chr17	60141924	60142234	(23115207)	+	AluSx1	SINE/Alu	1	309	(3)	1648659
1154	15.2	4.1	2.6	chr17	60142235	60142406	(23115035)	+	AluSx	SINE/Alu	135	312	(0)	1648658
89	0.0	2.4	0.0	chr17	60570079	60570163	(22687278)	+	(TTTC)n	Simple_repeat	1	87	(0)	1649554
354	30.2	3.2	0.2	chr17	61598872	61598991	(21658450)	+	L2c	LINE/L2	3230	3332	(55)	1651311
701	28.5	13.3	3.8	chr17	62727600	62728019	(20529422)	+	HAL1ME	LINE/L1	9	474	(1991)	1653587
1425	18.1	6.4	1.4	chr17	62728043	62728324	(20529117)	C	AluJr	SINE/Alu	(15)	297	1	1653588
594	26.2	15.6	2.4	chr17	62728376	62728707	(20528734)	+	HAL1ME	LINE/L1	775	1158	(1307)	1653587
481	29.2	16.8	4.2	chr17	66696952	66697262	(16560179)	+	L4_C_Mam	LINE/RTE-X	1272	1629	(3509)	1660671
24	8.0	3.2	7.8	chr17	66964833	66964894	(16292547)	+	G-rich	Low_complexity	1	64	(0)	1661142
30	0.0	0.0	0.0	chr17	66965161	66965186	(16292255)	+	(CA)n	Simple_repeat	1	26	(0)	1661143
24	29.6	3.3	1.1	chr17	66965195	66965286	(16292155)	+	(CG)n	Simple_repeat	1	95	(0)	1661144
187	27.4	0.0	1.9	chr17	68020519	68020570	(15236871)	C	L2a	LINE/L2	(3)	3423	3373	1663344
2365	7.5	0.7	1.3	chr17	68020941	68021245	(15236196)	+	AluSz	SINE/Alu	1	303	(9)	1663345
451	23.8	9.3	5.7	chr17	68343897	68344123	(14913318)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	375	1664023
923	25.5	0.4	3.8	chr17	69659943	69660207	(13597234)	C	LTR31	LTR/ERV1	(249)	370	115	1666142
2130	18.2	3.5	5.5	chr17	69660321	69660815	(13596626)	+	MER21C	LTR/ERVL	449	933	(5)	1666140
2701	18.4	5.0	1.8	chr17	69787922	69788580	(13468861)	+	Charlie1a	DNA/hAT-Charlie	741	1421	(34)	1666312
388	32.3	8.4	4.0	chr17	69788810	69789083	(13468358)	C	L2c	LINE/L2	(3)	3384	3098	1666313
556	25.9	14.6	1.9	chr17	73096066	73096274	(10161167)	C	MIRb	SINE/MIR	(8)	260	21	1671615
2317	11.5	0.0	0.0	chr17	73096532	73096836	(10160605)	+	AluSq2	SINE/Alu	1	305	(8)	1671616
452	35.1	0.9	2.4	chr17	73559233	73559401	(9698040)	+	MIRb	SINE/MIR	71	250	(12)	1672548
442	26.6	4.3	1.9	chr17	74670851	74671007	(8586434)	C	Charlie4z	DNA/hAT-Charlie	(5)	162	2	1674599
269	26.5	16.0	0.5	chr17	75632896	75633085	(7624356)	+	MamTip3	DNA/hAT-Tip100	109	333	(167)	1676495
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
18153	21.6	1.3	1.3	chr17	77169038	77171839	(6085602)	C	HERVIP10B3-int	LTR/ERV1	(734)	6869	4064	1679599
19	20.8	1.5	5.8	chr17	78168588	78168655	(5088786)	+	(GCG)n	Simple_repeat	1	69	(0)	1681320
13	19.8	0.0	6.5	chr17	78168805	78168850	(5088591)	+	(GGCGGC)n	Simple_repeat	1	46	(0)	1681321
23	11.4	3.8	8.5	chr17	78168845	78168923	(5088518)	+	(CCCGCGT)n	Simple_repeat	1	82	(0)	1681322
1520	10.6	10.2	6.6	chr17	80147777	80148049	(3109392)	C	AluJb	SINE/Alu	(27)	285	2	1684530
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
27	21.1	3.2	4.1	chr17	81712270	81712364	(1545077)	+	G-rich	Low_complexity	1	98	(0)	1686675
296	22.2	1.9	0.2	chr17	81712762	81712841	(1544600)	+	MIRc	SINE/MIR	44	125	(105)	1686676
659	22.5	4.4	1.7	chr17	81792544	81793663	(1463778)	+	(CA)n	Simple_repeat	1	1175	(0)	1686733
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
19	13.5	0.0	8.6	chr17	83050548	83050605	(206836)	+	A-rich	Low_complexity	1	58	(0)	1688525
12	18.6	5.4	0.0	chr17	83050849	83050885	(206556)	+	(GCACGG)n	Simple_repeat	1	39	(0)	1688526
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
1979	13.4	4.7	0.0	chr18	782719	782980	(79590305)	C	AluSz6	SINE/Alu	(36)	276	2	1690437
633	17.2	1.2	6.3	chr18	783074	783232	(79590053)	+	FLAM_C	SINE/Alu	11	223	(79)	1690438
762	19.3	0.0	1.5	chr18	3585662	3585796	(76787489)	+	FLAM_C	SINE/Alu	1	133	(10)	1694698
4457	1.7	0.0	0.0	chr18	5281019	5281624	(75091661)	C	L1PA3	LINE/L1	(705)	5450	4845	1697028
2023	15.1	0.7	0.3	chr18	6561256	6561553	(73811732)	+	AluJr	SINE/Alu	1	299	(13)	1698726
288	26.2	14.9	2.0	chr18	8704260	8704444	(71668841)	C	MIRc	SINE/MIR	(28)	240	33	1701815
402	35.5	5.8	0.0	chr18	8704432	8704659	(71668626)	+	MIRb	SINE/MIR	20	261	(7)	1701816
7954	21.2	1.3	7.9	chr18	9032673	9033916	(71339369)	+	MLT1A1-int	LTR/ERVL-MaLR	546	1733	(2)	1702309
1857	13.9	0.0	8.0	chr18	9262439	9262777	(71110508)	C	AluJr	SINE/Alu	(0)	312	1	1702720
2196	8.6	0.0	7.7	chr18	11963541	11963877	(68409408)	C	AluSc8	SINE/Alu	(0)	311	1	1706685
2437	1.8	0.0	0.0	chr18	12407288	12407568	(67965717)	C	AluY	SINE/Alu	(30)	281	1	1707389
2036	20.7	11.2	6.0	chr18	12407569	12407658	(67965627)	+	MER67C	LTR/ERV1	606	710	(1)	1707387
16	17.8	7.2	4.0	chr18	12408288	12408356	(67964929)	+	(GCCGG)n	Simple_repeat	1	74	(0)	1707390
1138	29.3	5.2	3.3	chr18	21191505	21191841	(59181444)	+	ERV3-16A3_I-int	LTR/ERVL	201	568	(4428)	1712083
834	26.2	6.5	3.1	chr18	21192030	21192359	(59180926)	+	LTR16B2	LTR/ERVL	5	412	(50)	1712085
5277	8.6	1.6	3.9	chr18	21192366	21192606	(59180679)	+	L1PB2	LINE/L1	5381	5611	(540)	1712086
293	29.9	10.4	6.3	chr18	22451854	22452028	(57921257)	C	MIR	SINE/MIR	(67)	195	13	1714579
14	25.4	1.9	1.9	chr18	23503490	23503542	(56869743)	+	(AGCCGC)n	Simple_repeat	1	54	(0)	1716343
20	20.5	3.6	0.0	chr18	23503782	23503837	(56869448)	+	(CCCGT)n	Simple_repeat	1	58	(0)	1716344
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
361	31.7	9.1	4.0	chr18	24868896	24869290	(55503995)	C	Mam_R4	LINE/Dong-R4	(368)	3441	3025	1718607
962	31.4	1.9	2.1	chr18	24869338	24869763	(55503522)	C	Mam_R4	LINE/Dong-R4	(868)	2941	2517	1718607
38	14.8	8.8	3.4	chr18	25351013	25351148	(55022137)	+	(CGCGCTC)n	Simple_repeat	1	148	(0)	1719212
19	10.4	0.0	0.0	chr18	25351150	25351180	(55022105)	+	(CGG)n	Simple_repeat	1	31	(0)	1719213
25	28.2	0.0	0.0	chr18	25351221	25351283	(55022002)	+	GA-rich	Low_complexity	1	63	(0)	1719214
4862	3.6	0.2	0.2	chr18	25587045	25587630	(54785655)	+	L1PA4	LINE/L1	5567	6152	(3)	1719545
1219	27.9	5.0	6.5	chr18	25587631	25587947	(54785338)	C	L1ME1	LINE/L1	(4770)	2252	1930	1719540
491	22.4	11.2	2.0	chr18	26089740	26089885	(54283400)	+	L2c	LINE/L2	3227	3387	(0)	1720303
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
977	29.1	9.0	4.7	chr18	29430260	29431846	(50941439)	+	L1MEg	LINE/L1	2404	4131	(3323)	1725037
15474	15.2	2.5	2.3	chr18	30932956	30934713	(49438572)	C	Tigger4	DNA/TcMar-Tigger	(958)	1773	1	1726976
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
3017	10.4	2.1	0.0	chr18	31568351	31568773	(48804512)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1727869
41	0.0	2.6	0.0	chr18	31710811	31710849	(48662436)	+	(AC)n	Simple_repeat	1	40	(0)	1728092
1994	8.6	1.4	1.0	chr18	31711258	31711550	(48661735)	C	L1PREC2	LINE/L1	(2)	6158	5865	1728093
1087	6.7	0.0	4.0	chr18	32017986	32018135	(48355150)	C	AluSz	SINE/Alu	(167)	145	2	1728648
2425	6.3	0.3	3.0	chr18	32158565	32158867	(48214418)	C	AluSx	SINE/Alu	(17)	295	1	1728973
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
770	27.2	18.7	0.9	chr18	33201483	33201913	(47171372)	C	LTR50	LTR/ERVL	(253)	542	18	1730419
11667	13.3	0.8	1.4	chr18	33972619	33974451	(46398834)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	597	1731356
16	30.8	1.5	2.9	chr18	34224768	34224834	(46148451)	+	(TG)n	Simple_repeat	1	68	(0)	1731666
23	15.2	3.1	4.5	chr18	34224917	34224929	(46148356)	+	(CCCCT)n	Simple_repeat	1	29	(40)	1731667
13	21.5	4.7	0.0	chr18	34224930	34224972	(46148313)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	1731668
23	15.2	3.1	4.5	chr18	34224973	34224987	(46148298)	+	(CCCCT)n	Simple_repeat	30	69	(0)	1731667
13	17.6	2.5	2.4	chr18	34225082	34225121	(46148164)	+	(GCAGGCT)n	Simple_repeat	1	41	(0)	1731669
14	24.6	0.0	3.9	chr18	34225331	34225382	(46147903)	+	(TCCCCCT)n	Simple_repeat	1	52	(0)	1731670
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
271	27.0	10.8	5.5	chr18	35169511	35169800	(45203485)	+	L2-1_AMi	LINE/L2	229	535	(700)	1732933
536	23.0	8.2	0.0	chr18	35169803	35169937	(45203348)	+	L2	LINE/L2	2476	2622	(797)	1732934
346	10.3	3.3	1.7	chr18	35169971	35170029	(45203256)	+	MLT1C	LTR/ERVL-MaLR	408	467	(0)	1732935
1666	15.0	0.0	3.1	chr18	35283101	35283354	(45089931)	+	AluSx	SINE/Alu	1	246	(66)	1733105
7720	19.0	5.7	7.2	chr18	35283355	35285138	(45088147)	C	MER52A	LTR/ERV1	(0)	1755	1	1733106
15	4.2	4.0	0.0	chr18	35376959	35376983	(44996302)	+	(CCGCG)n	Simple_repeat	1	26	(0)	1733224
15658	13.4	4.5	2.6	chr18	36504810	36507486	(43865799)	+	Tigger4	DNA/TcMar-Tigger	1	2731	(0)	1734883
12	18.1	2.4	4.8	chr18	36828617	36828657	(43544628)	+	(CCT)n	Simple_repeat	1	42	(0)	1735268
384	33.6	6.2	0.0	chr18	37579138	37579274	(42794011)	C	MIR3	SINE/MIR	(0)	208	63	1736239
16159	14.6	1.6	1.1	chr18	38786689	38788751	(41584534)	+	Tigger4	DNA/TcMar-Tigger	655	2731	(0)	1737848
1058	33.4	13.7	5.2	chr18	38924238	38925377	(41447908)	+	LTR78B	LTR/ERV1	9	1247	(49)	1738013
2205	13.4	0.0	0.0	chr18	38925411	38925717	(41447568)	+	AluSz	SINE/Alu	1	307	(5)	1738014
1669	16.7	5.0	3.0	chr18	39800102	39800435	(40572850)	C	MER61A	LTR/ERV1	(0)	341	1	1739189
19	13.9	0.0	4.5	chr18	48408908	48408951	(31964334)	+	(CTCCCCC)n	Simple_repeat	1	44	(0)	1751858
15	25.3	1.5	4.5	chr18	48409184	48409249	(31964036)	+	(CCCGGCG)n	Simple_repeat	1	67	(0)	1751859
19	17.4	0.0	4.1	chr18	48409417	48409465	(31963820)	+	(CTCCCCC)n	Simple_repeat	1	49	(0)	1751860
20	27.4	0.0	2.9	chr18	51030706	51030774	(29342511)	+	(CGG)n	Simple_repeat	1	69	(0)	1756243
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
15291	13.0	2.2	0.8	chr18	53694728	53697111	(26676174)	C	Tigger4	DNA/TcMar-Tigger	(309)	2422	4	1760166
15	27.2	0.0	6.7	chr18	58671348	58671422	(21701863)	+	(GCCCC)n	Simple_repeat	1	75	(0)	1767638
15	28.2	0.0	7.2	chr18	58671867	58671949	(21701336)	+	(GCGG)n	Simple_repeat	1	83	(0)	1767639
1576	27.0	13.1	1.3	chr18	59079429	59080033	(21293252)	C	ERVL-E-int	LTR/ERVL	(1648)	4019	3333	1768413
288	29.1	11.3	3.4	chr18	59140223	59140489	(21232796)	+	L3	LINE/CR1	3634	3924	(175)	1768507
11473	16.3	4.3	1.0	chr18	68041175	68042603	(12330682)	C	Tigger4	DNA/TcMar-Tigger	(1219)	1512	5	1781248
14267	16.9	3.8	1.2	chr18	71540414	71542545	(8830740)	+	Tigger4	DNA/TcMar-Tigger	1	2146	(585)	1786074
4330	19.5	4.7	3.1	chr18	79166709	79168032	(1205253)	C	MER52A	LTR/ERV1	(0)	2123	801	1795256
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
12	16.3	7.0	2.2	chr18	79988584	79988626	(384659)	+	(CGTG)n	Simple_repeat	1	46	(0)	1795993
348	18.2	4.3	1.1	chr19	479918	480006	(58137610)	+	LTR3B_	LTR/ERVK	360	451	(48)	1796989
562	26.1	7.3	1.6	chr19	480035	480279	(58137337)	C	L2b	LINE/L2	(195)	3180	2921	1796988
4343	6.8	0.0	9.4	chr19	506329	506438	(58111178)	C	LTR10C	LTR/ERV1	(487)	104	1	1797045
11	27.4	2.0	2.0	chr19	1513424	1513473	(57104143)	+	(TCCCCC)n	Simple_repeat	1	51	(0)	1798910
871	25.4	3.2	1.4	chr19	1634754	1634969	(56982647)	+	MER58A	DNA/hAT-Charlie	1	220	(4)	1799169
188	29.1	10.4	0.0	chr19	1635178	1635263	(56982353)	+	L2	LINE/L2	2489	2584	(835)	1799170
12	30.7	3.5	0.0	chr19	1774916	1774972	(56842644)	+	(TCTCTG)n	Simple_repeat	1	59	(0)	1799491
13	8.5	4.0	0.0	chr19	1775041	1775065	(56842551)	+	(CCT)n	Simple_repeat	1	26	(0)	1799492
19	6.7	3.1	0.0	chr19	1775119	1775150	(56842466)	+	(CCCG)n	Simple_repeat	1	33	(0)	1799493
12	18.1	0.0	3.0	chr19	1775156	1775188	(56842428)	+	(GCAGGA)n	Simple_repeat	1	33	(0)	1799494
2305	8.6	2.9	0.3	chr19	2095740	2096043	(56521573)	C	AluSx	SINE/Alu	(0)	312	1	1800144
17	27.5	1.3	4.0	chr19	2163789	2163863	(56453753)	+	G-rich	Low_complexity	1	76	(0)	1800273
20	22.1	5.9	0.0	chr19	2164004	2164030	(56453586)	+	(GAGGCC)n	Simple_repeat	1	56	(16)	1800274
20	12.6	0.0	0.0	chr19	2164031	2164065	(56453551)	+	(GCG)n	Simple_repeat	1	35	(0)	1800275
20	22.1	5.9	0.0	chr19	2164066	2164071	(56453545)	+	(GAGGCC)n	Simple_repeat	57	72	(0)	1800274
20	23.1	1.4	4.2	chr19	2164084	2164154	(56453462)	+	(CCGC)n	Simple_repeat	1	72	(0)	1800276
2211	11.1	0.3	0.0	chr19	2895504	2895801	(55721815)	+	AluSx1	SINE/Alu	1	299	(13)	1801875
402	25.4	21.2	0.5	chr19	3047759	3047946	(55569670)	+	L2a	LINE/L2	3172	3412	(14)	1802259
1602	18.4	1.6	1.6	chr19	3910087	3910400	(54707216)	C	L1MB3	LINE/L1	(159)	6024	5711	1804316
181	25.9	5.3	0.0	chr19	5046261	5046314	(53571302)	C	MIR1_Amn	SINE/MIR	(73)	157	101	1807137
19	16.0	4.2	6.7	chr19	5340732	5340803	(53276813)	+	(CGCGCGG)n	Simple_repeat	1	75	(0)	1807705
18	27.3	0.0	3.1	chr19	5340835	5340899	(53276717)	+	(CCG)n	Simple_repeat	1	65	(0)	1807706
489	29.1	8.0	0.9	chr19	6191288	6191365	(52426251)	C	Tigger18a	DNA/TcMar-Tigger	(364)	488	411	1809652
1889	17.9	3.9	6.5	chr19	6191366	6191765	(52425851)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	2	1809653
4085	17.3	4.3	4.6	chr19	6291798	6292476	(52325140)	+	MER52-int	LTR/ERV1	801	1487	(5604)	1809823
2201	13.1	0.0	1.0	chr19	6292477	6292790	(52324826)	+	AluSz6	SINE/Alu	2	312	(0)	1809826
347	26.5	1.0	3.1	chr19	10028025	10028144	(48589472)	+	MIR	SINE/MIR	45	168	(100)	1818727
13	11.1	3.2	3.1	chr19	10096519	10096549	(48521067)	+	(CAG)n	Simple_repeat	1	32	(0)	1818889
23	30.7	0.0	3.1	chr19	10420446	10420542	(48197074)	+	G-rich	Low_complexity	1	97	(0)	1819693
13	15.8	6.8	2.1	chr19	10420911	10420954	(48196662)	+	(CGGCAG)n	Simple_repeat	1	47	(0)	1819694
14	17.1	6.2	2.0	chr19	10421038	10421085	(48196531)	+	(GGCAGC)n	Simple_repeat	1	51	(0)	1819695
2409	6.4	0.3	1.0	chr19	10652870	10653166	(47964450)	C	AluSx3	SINE/Alu	(16)	295	1	1820363
276	35.6	0.7	5.6	chr19	10653426	10653568	(47964048)	+	MIR3	SINE/MIR	50	185	(23)	1820364
2370	9.4	0.0	0.0	chr19	10936490	10936787	(47680829)	+	AluSx1	SINE/Alu	1	298	(14)	1821038
1029	11.9	0.5	8.9	chr19	10937062	10937094	(47680522)	C	MER4E1	LTR/ERV1	(0)	781	757	1821039
2193	8.4	2.0	1.7	chr19	12441380	12441676	(46175940)	C	AluSg	SINE/Alu	(11)	299	2	1824455
2341	8.1	0.7	0.0	chr19	12680834	12681131	(45936485)	C	AluSx3	SINE/Alu	(11)	300	1	1824984
1383	11.8	4.5	14.5	chr19	12919616	12919786	(45697830)	C	AluJb	SINE/Alu	(15)	297	131	1825530
13	18.3	2.6	2.5	chr19	12957099	12957137	(45660479)	+	(CCGCGG)n	Simple_repeat	1	40	(0)	1825617
180	32.0	2.5	2.7	chr19	12983202	12983531	(45634085)	+	(TC)n	Simple_repeat	1	325	(0)	1825704
13	27.9	0.0	0.0	chr19	12983531	12983573	(45634043)	+	(CGGCC)n	Simple_repeat	1	43	(0)	1825705
15	9.9	5.6	5.3	chr19	12983690	12983725	(45633891)	+	(GC)n	Simple_repeat	1	38	(0)	1825706
284	14.3	0.0	2.0	chr19	12983816	12983865	(45633751)	+	MIR1_Amn	SINE/MIR	109	157	(73)	1825707
376	33.0	2.3	4.9	chr19	13117853	13117987	(45499629)	+	MIR	SINE/MIR	126	262	(0)	1825895
491	29.5	9.8	1.2	chr19	13117903	13118070	(45499546)	C	MIRc	SINE/MIR	(30)	238	55	1825908
23	21.1	3.3	0.0	chr19	13118318	13118404	(45499212)	+	(GCGGAG)n	Simple_repeat	1	89	(0)	1825909
3971	12.6	3.1	2.6	chr19	13655540	13655703	(44961913)	+	MER39B	LTR/ERV1	496	653	(0)	1827399
2257	15.8	1.2	7.6	chr19	13655761	13655937	(44961679)	C	LTR26C	LTR/ERV1	(0)	539	395	1827402
2393	9.1	1.0	0.0	chr19	13655938	13656246	(44961370)	C	AluSx	SINE/Alu	(0)	312	1	1827403
3912	13.3	1.3	2.0	chr19	13680838	13681153	(44936463)	C	LTR26	LTR/ERV1	(0)	603	287	1827476
13	23.6	4.8	3.0	chr19	13795528	13795590	(44822026)	+	(GCGGA)n	Simple_repeat	1	66	(0)	1827824
13	15.4	0.0	3.2	chr19	13795618	13795648	(44821968)	+	(CCCGG)n	Simple_repeat	1	31	(0)	1827825
19	19.1	3.8	6.0	chr19	13795670	13795749	(44821867)	+	G-rich	Low_complexity	1	83	(0)	1827826
14	7.2	0.0	8.6	chr19	13842976	13843010	(44774606)	+	G-rich	Low_complexity	1	35	(0)	1827937
12	29.7	1.8	1.8	chr19	14075209	14075263	(44542353)	+	(CCCGG)n	Simple_repeat	1	56	(0)	1828508
251	22.1	12.5	0.0	chr19	14075322	14075398	(44542218)	C	L2b	LINE/L2	(16)	3359	3272	1828509
2279	8.8	0.3	0.3	chr19	14075567	14075862	(44541754)	+	AluSz6	SINE/Alu	1	296	(16)	1828510
29	24.8	2.8	6.1	chr19	16471766	16471909	(42145707)	+	(CCGC)n	Simple_repeat	1	148	(0)	1833998
13	8.1	0.0	6.7	chr19	16472093	16472122	(42145494)	+	(GGCGG)n	Simple_repeat	1	30	(0)	1833999
36	0.0	0.0	0.0	chr19	16472404	16472434	(42145182)	+	(GT)n	Simple_repeat	1	31	(0)	1834000
12	20.5	2.0	5.9	chr19	17334383	17334432	(41283184)	+	(CCCCAG)n	Simple_repeat	1	51	(0)	1836049
301	24.5	12.8	5.9	chr19	17453893	17453995	(41163621)	C	ORSL-2b	DNA/hAT-Tip100	(51)	457	336	1836393
287	30.9	8.1	11.8	chr19	17718702	17718947	(40898669)	+	MIRb	SINE/MIR	30	265	(3)	1837102
249	28.3	3.4	2.6	chr19	17718938	17719093	(40898523)	+	L2c	LINE/L2	2967	3122	(265)	1837103
424	22.4	0.0	0.4	chr19	17855561	17855656	(40761960)	C	MIR	SINE/MIR	(74)	194	102	1837453
2476	6.0	0.3	0.0	chr19	18152071	18152372	(40465244)	+	AluSp	SINE/Alu	1	303	(10)	1838226
17	15.3	2.6	0.0	chr19	18203591	18203628	(40413988)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	1838357
12	25.0	6.3	1.5	chr19	18280608	18280670	(40336946)	+	(TGCGCT)n	Simple_repeat	1	67	(0)	1838527
1967	14.5	0.7	1.6	chr19	19665379	19665544	(38952072)	C	AluSz	SINE/Alu	(12)	300	134	1841385
2306	10.7	0.0	0.0	chr19	19665545	19665843	(38951773)	C	AluSx3	SINE/Alu	(12)	299	1	1841386
356	26.3	4.8	0.0	chr19	19777091	19777208	(38840408)	+	HERVL40-int	LTR/ERVL	3762	3885	(1645)	1841600
410	31.9	13.9	2.4	chr19	28921052	28921465	(29696151)	C	L2a	LINE/L2	(2)	3424	2956	1849438
2512	24.0	9.1	5.1	chr19	28921545	28922249	(29695367)	+	MSTC-int	LTR/ERVL-MaLR	912	1662	(73)	1849439
221	35.4	13.6	2.9	chr19	29845601	29846056	(28771560)	+	L2	LINE/L2	2333	2845	(574)	1850976
751	19.9	0.7	0.0	chr19	31328015	31328160	(27289456)	+	UCON14	DNA?	166	312	(35)	1853055
410	34.9	0.0	0.7	chr19	31328036	31328182	(27289434)	C	UCON14	DNA?	(188)	159	14	1853056
16	5.3	0.0	0.0	chr19	32345270	32345289	(26272327)	+	(A)n	Simple_repeat	1	20	(0)	1854638
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
14	17.6	0.0	0.0	chr19	33302768	33302799	(25314817)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1856557
11	13.2	5.7	2.7	chr19	34772894	34772928	(23844688)	+	G-rich	Low_complexity	1	37	(0)	1859111
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
2031	14.6	0.0	0.0	chr19	36379389	36379690	(22237926)	C	AluJo	SINE/Alu	(10)	302	1	1862427
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
2569	23.0	1.9	6.0	chr19	37578229	37578891	(21038725)	+	L1P4c	LINE/L1	101	735	(5899)	1864691
684	10.1	2.6	2.1	chr19	38375161	38375278	(20242338)	+	FLAM_C	SINE/Alu	4	146	(20)	1866529
241	32.8	1.7	0.9	chr19	38974966	38975079	(19642537)	+	HAL1ME	LINE/L1	2210	2324	(141)	1867892
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
12	13.9	0.0	0.0	chr19	40702447	40702470	(17915146)	+	(GATG)n	Simple_repeat	1	24	(0)	1871738
2613	6.5	0.0	0.0	chr19	41733485	41733791	(16883825)	+	AluY	SINE/Alu	1	307	(4)	1873815
412	24.4	10.4	3.5	chr19	41734045	41734214	(16883402)	C	MIR	SINE/MIR	(1)	261	79	1873816
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
28	8.6	0.0	0.0	chr19	42387652	42387689	(16229927)	+	(T)n	Simple_repeat	1	38	(0)	1875173
972	10.6	0.8	0.0	chr19	43433143	43433274	(15184342)	+	AluJr	SINE/Alu	1	133	(179)	1876743
928	15.0	0.0	0.0	chr19	43594552	43594684	(15022932)	+	FLAM_C	SINE/Alu	1	133	(10)	1877191
20615	10.9	2.4	2.1	chr19	43969649	43974758	(14642858)	+	L1PA11	LINE/L1	1808	6915	(694)	1877994
1854	12.0	1.5	2.5	chr19	43974759	43975034	(14642582)	+	AluSz6	SINE/Alu	23	295	(17)	1877996
321	27.7	14.1	3.0	chr19	43990435	43990598	(14627018)	C	MIR	SINE/MIR	(46)	216	32	1878020
1320	24.3	14.7	2.7	chr19	43990696	43991105	(14626511)	C	MER70A	LTR/ERVL	(0)	472	5	1878021
457	32.8	11.9	3.9	chr19	44697642	44698469	(13919147)	C	L2b	LINE/L2	(9)	3366	2420	1879370
13	24.2	2.3	0.0	chr19	45153862	45153905	(13463711)	+	(GAGAGGC)n	Simple_repeat	1	45	(0)	1880571
12	31.2	1.9	0.0	chr19	45153906	45153912	(13463704)	+	(GGCGA)n	Simple_repeat	2	53	(0)	1880572
12	23.0	6.7	5.2	chr19	45154019	45154108	(13463508)	+	(GGCAGA)n	Simple_repeat	1	96	(0)	1880573
2191	8.0	5.5	0.0	chr19	45927336	45927624	(12689992)	+	AluSx1	SINE/Alu	1	306	(6)	1882601
591	24.4	5.2	2.4	chr19	45927752	45927919	(12689697)	+	LTR67B	LTR/ERVL	2	174	(446)	1882602
246	28.9	4.0	2.0	chr19	45928008	45928106	(12689510)	+	LTR67B	LTR/ERVL	412	512	(108)	1882602
12	22.4	0.0	6.4	chr19	47130933	47130979	(11486637)	+	GA-rich	Low_complexity	1	47	(0)	1885344
260	26.2	14.9	6.4	chr19	48203198	48203333	(10414283)	+	L2a	LINE/L2	3102	3256	(170)	1888195
564	25.4	15.5	0.5	chr19	48203359	48203544	(10414072)	+	MIR	SINE/MIR	7	225	(37)	1888198
19	3.8	0.0	0.0	chr19	48574263	48574304	(10043312)	+	(CCTT)n	Simple_repeat	1	42	(0)	1889112
200	32.1	2.3	3.5	chr19	48574494	48574580	(10043036)	+	MIRb	SINE/MIR	131	216	(52)	1889113
410	26.3	8.8	3.2	chr19	48574571	48574783	(10042833)	C	MIRb	SINE/MIR	(3)	265	38	1889114
205	25.5	1.8	1.8	chr19	48574929	48574984	(10042632)	C	MIRb	SINE/MIR	(0)	268	213	1889115
1657	13.6	0.0	10.0	chr19	48575101	48575435	(10042181)	C	AluSg	SINE/Alu	(0)	310	3	1889116
207	26.3	5.0	0.0	chr19	48637311	48637367	(9980249)	+	X9_LINE	LINE/L1	584	643	(293)	1889253
14	10.7	3.1	3.0	chr19	48637382	48637413	(9980203)	+	GA-rich	Low_complexity	1	33	(0)	1889254
2410	4.0	1.7	2.4	chr19	48782123	48782420	(9835196)	C	AluY	SINE/Alu	(15)	296	1	1889587
64	0.0	0.0	0.0	chr19	48782777	48782833	(9834783)	+	(TTAT)n	Simple_repeat	1	57	(0)	1889588
1950	13.5	0.4	0.0	chr19	48782834	48783114	(9834502)	C	AluJr	SINE/Alu	(30)	282	1	1889589
598	14.1	0.3	4.2	chr19	49064330	49064768	(9552848)	+	MSR1	Satellite	1	422	(0)	1890292
18	20.2	0.0	2.1	chr19	49064848	49064894	(9552722)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1890293
20	20.8	1.8	1.7	chr19	49065069	49065125	(9552491)	+	G-rich	Low_complexity	1	58	(0)	1890294
536	14.7	0.4	1.9	chr19	49065190	49065352	(9552264)	+	MSR1	Satellite	1	160	(0)	1890295
1746	22.8	0.7	6.7	chr19	49728379	49728810	(8888806)	+	MER41B	LTR/ERV1	110	515	(119)	1891791
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
2118	29.1	3.9	2.3	chr19	57406185	57406849	(1210767)	C	L1M2	LINE/L1	(5226)	1623	948	1907750
796	15.2	18.2	0.5	chr19	57632687	57632885	(984731)	C	Tigger2	DNA/TcMar-Tigger	(201)	2517	2276	1908073
400	13.4	0.0	8.2	chr19	57632879	57632951	(984665)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(999)	69	3	1908076
354	25.6	14.1	5.0	chr19	58211016	58211061	(406555)	C	MLT1H1	LTR/ERVL-MaLR	(197)	398	352	1909113
17	18.7	6.2	6.8	chr19	58305442	58305538	(312078)	+	(AGTGGTG)n	Simple_repeat	1	103	(0)	1909308
6969	12.3	2.1	0.2	chr2	3228986	3230019	(238963510)	C	Tigger4	DNA/TcMar-Tigger	(1304)	1427	374	1914209
2278	14.8	16.7	0.7	chr2	8138527	8138953	(234054576)	+	LTR54	LTR/ERV1	2	510	(0)	1920937
2452	7.3	0.3	0.0	chr2	9192038	9192337	(233001192)	C	AluY	SINE/Alu	(10)	301	1	1922532
350	24.9	11.3	6.7	chr2	9554870	9555063	(232638466)	C	MamRep1879	DNA/hAT-Tip100?	(1)	215	12	1923167
31	2.8	2.7	0.0	chr2	9556318	9556354	(232637175)	+	(CCCCGAG)n	Simple_repeat	1	38	(0)	1923168
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
18	25.3	1.9	0.0	chr2	9951716	9951767	(232241762)	+	(CCG)n	Simple_repeat	1	53	(0)	1923945
14	17.7	2.5	2.4	chr2	9951940	9951979	(232241550)	+	G-rich	Low_complexity	1	41	(0)	1923946
16	20.5	0.0	0.0	chr2	10079921	10079959	(232113570)	+	G-rich	Low_complexity	1	39	(0)	1924129
16	25.3	7.0	0.0	chr2	10302815	10302885	(231890644)	+	(CGCCCCG)n	Simple_repeat	1	76	(0)	1924544
13	6.8	0.0	12.5	chr2	10302901	10302940	(231890589)	+	(GGC)n	Simple_repeat	1	40	(0)	1924545
16	15.5	3.3	0.0	chr2	10303275	10303304	(231890225)	+	(TG)n	Simple_repeat	1	31	(0)	1924546
506	28.4	8.7	3.7	chr2	10832143	10832383	(231361146)	+	L1ME3A	LINE/L1	5589	5842	(400)	1925566
230	28.2	0.0	5.3	chr2	10832564	10832638	(231360891)	+	L1ME3A	LINE/L1	6102	6172	(1)	1925566
321	39.0	4.1	2.6	chr2	11535954	11536219	(230657310)	C	L2c	LINE/L2	(12)	3375	3106	1926835
336	32.3	5.7	4.3	chr2	11833480	11833618	(230359911)	C	MIRb	SINE/MIR	(109)	159	19	1927321
1952	22.2	19.4	0.0	chr2	12586835	12587360	(229606169)	C	MLT1E	LTR/ERVL-MaLR	(0)	653	1	1928551
1791	27.0	3.7	1.6	chr2	12587547	12588054	(229605475)	+	LTR40a	LTR/ERVL	1	519	(0)	1928552
7476	3.2	0.6	0.0	chr2	13580485	13581477	(228612052)	C	L1PA4	LINE/L1	(3)	6152	5156	1930014
1979	12.3	2.4	0.3	chr2	13581490	13581774	(228611755)	+	AluSq2	SINE/Alu	6	296	(17)	1930015
23	23.2	1.2	6.2	chr2	13581786	13581865	(228611664)	+	(AT)n	Simple_repeat	1	81	(0)	1930016
1027	22.5	3.0	1.1	chr2	13581896	13582187	(228611342)	C	MLT2B4	LTR/ERVL	(114)	300	1	1930017
19	11.7	0.0	0.0	chr2	14592345	14592372	(227601157)	+	(A)n	Simple_repeat	1	28	(0)	1931420
1112	16.5	3.2	0.5	chr2	14592373	14592585	(227600944)	+	MLT1A0	LTR/ERVL-MaLR	144	362	(3)	1931418
2222	9.5	0.0	0.0	chr2	16760143	16760427	(225433102)	+	AluSg	SINE/Alu	1	285	(25)	1935011
31	0.0	2.7	2.6	chr2	16760429	16760465	(225433064)	+	(ACAA)n	Simple_repeat	1	38	(0)	1935012
299	26.8	4.7	4.1	chr2	16760762	16760932	(225432597)	+	L2	LINE/L2	2619	2790	(629)	1935013
9055	21.2	1.0	2.6	chr2	19373092	19374850	(222818679)	C	MLT1A1-int	LTR/ERVL-MaLR	(5)	1730	1	1938721
207	26.8	2.4	5.8	chr2	20614553	20614639	(221578890)	+	L2b	LINE/L2	3290	3373	(2)	1940640
13	15.3	2.5	4.9	chr2	20614886	20614925	(221578604)	+	(CCAGGAG)n	Simple_repeat	1	41	(0)	1940641
11	24.2	5.5	1.7	chr2	23384895	23384949	(218808580)	+	G-rich	Low_complexity	1	58	(0)	1944312
15	7.8	3.7	0.0	chr2	23384944	23384970	(218808559)	+	(GGAC)n	Simple_repeat	1	28	(0)	1944313
31	0.0	0.0	7.0	chr2	25673582	25673624	(216519905)	+	(GGCGGAG)n	Simple_repeat	1	43	(0)	1948349
12	28.7	0.0	3.7	chr2	25673638	25673691	(216519838)	+	G-rich	Low_complexity	1	54	(0)	1948350
250	33.6	12.1	1.7	chr2	25673989	25674276	(216519253)	C	L2c	LINE/L2	(38)	3349	3028	1948351
764	22.8	0.0	0.7	chr2	25829105	25829253	(216364276)	+	AluJr	SINE/Alu	127	274	(38)	1948644
31	5.9	0.0	0.0	chr2	25829278	25829313	(216364216)	+	(AC)n	Simple_repeat	1	36	(0)	1948645
2976	23.2	10.5	6.3	chr2	25829766	25830349	(216363180)	+	L1MD2	LINE/L1	442	1205	(5335)	1948646
17	7.0	3.3	0.0	chr2	27071533	27071562	(215121967)	+	(CCACGG)n	Simple_repeat	1	31	(0)	1951129
16	22.3	4.0	5.1	chr2	27071773	27071847	(215121682)	+	(GGCTGG)n	Simple_repeat	1	78	(0)	1951130
17	10.3	0.0	3.0	chr2	27370816	27370848	(214822681)	+	(GGCCG)n	Simple_repeat	1	33	(0)	1951690
1745	25.4	2.7	4.9	chr2	30075363	30075669	(212117860)	+	L1ME2	LINE/L1	5647	5940	(224)	1956312
2240	9.2	0.3	0.0	chr2	30075670	30075951	(212117578)	+	AluSz	SINE/Alu	1	283	(29)	1956315
319	26.3	11.6	1.4	chr2	30502028	30502166	(211691363)	C	L1ME4a	LINE/L1	(2)	6122	5968	1957143
2591	27.9	1.5	3.8	chr2	31698287	31698572	(210494957)	+	L1M3b	LINE/L1	1700	1976	(5520)	1958781
10335	24.5	4.7	3.6	chr2	31698559	31701022	(210492507)	+	L1M3b	LINE/L1	1845	4013	(3549)	1958781
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
15555	13.2	4.6	1.7	chr2	32526070	32528220	(209665309)	+	Tigger4	DNA/TcMar-Tigger	1	2238	(493)	1960462
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
4473	22.3	2.6	5.5	chr2	32976419	32977885	(209215644)	C	L1PA14	LINE/L1	(5258)	1435	55	1961277
12918	12.2	3.6	1.9	chr2	33736291	33737371	(208456158)	C	Tigger4	DNA/TcMar-Tigger	(957)	1774	672	1962458
15	18.5	5.9	1.9	chr2	36355764	36355818	(205837711)	+	(GGAGC)n	Simple_repeat	1	57	(0)	1965962
15	20.1	5.7	1.8	chr2	36355925	36355977	(205837552)	+	(CGC)n	Simple_repeat	1	56	(0)	1965963
13	18.2	0.0	0.0	chr2	36598022	36598052	(205595477)	+	(CCGCCT)n	Simple_repeat	1	31	(0)	1966234
2604	3.4	2.0	0.7	chr2	36645533	36645826	(205547703)	+	AluY	SINE/Alu	1	298	(13)	1966291
259	29.3	0.9	4.1	chr2	36645833	36645953	(205547576)	C	LTR33A	LTR/ERVL	(102)	418	302	1966292
239	30.1	10.4	0.3	chr2	36646080	36646223	(205547306)	C	LTR33A	LTR/ERVL	(304)	199	42	1966292
623	32.8	7.1	0.9	chr2	36646418	36646734	(205546795)	+	MLT1I	LTR/ERVL-MaLR	74	411	(0)	1966293
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
435	34.5	25.8	2.6	chr2	39435989	39436260	(202757269)	+	LFSINE_Vert	SINE/tRNA	125	459	(0)	1971189
343	38.2	3.7	0.0	chr2	40440473	40440603	(201752926)	C	L2b	LINE/L2	(0)	3375	3240	1972585
28	0.0	3.3	0.0	chr2	42810107	42810136	(199383393)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1976361
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
16384	13.4	1.5	3.1	chr2	43628754	43630585	(198562944)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	948	1977816
331	33.6	10.1	1.5	chr2	47193566	47193701	(194999828)	+	Charlie4z	DNA/hAT-Charlie	1	149	(18)	1983515
805	14.8	1.5	0.0	chr2	47725482	47725616	(194467913)	+	AluSx	SINE/Alu	173	309	(3)	1984653
1533	21.5	7.3	5.7	chr2	47725706	47725717	(194467812)	C	L1ME1	LINE/L1	(3)	6176	6164	1984654
1704	17.5	2.6	3.9	chr2	47725718	47726025	(194467504)	+	AluJr4	SINE/Alu	2	305	(7)	1984655
2394	27.0	13.9	1.7	chr2	54312282	54313302	(187880227)	+	L2a	LINE/L2	1339	2504	(915)	1994158
11247	10.7	1.5	0.9	chr2	54324648	54326267	(187867262)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1994174
598	33.3	11.8	1.2	chr2	54373823	54374238	(187819291)	C	L3	LINE/CR1	(2536)	1563	1098	1994261
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
793	24.4	5.6	4.7	chr2	59816254	59816554	(182376975)	+	UCON66	Unknown	114	417	(148)	2001611
13	18.8	0.0	5.0	chr2	61471025	61471035	(180722494)	+	(CACCGC)n	Simple_repeat	1	39	(0)	2004394
16	11.6	0.0	0.0	chr2	61471036	61471063	(180722466)	+	(CGC)n	Simple_repeat	1	28	(0)	2004395
17	25.1	0.0	0.0	chr2	61538196	61538242	(180655287)	+	(GCTGCC)n	Simple_repeat	1	47	(0)	2004523
2390	7.5	1.6	0.7	chr2	61888897	61889202	(180304327)	C	AluSx1	SINE/Alu	(3)	309	1	2005406
320	33.6	6.2	1.8	chr2	62181298	62181471	(180012058)	+	MIRc	SINE/MIR	14	190	(18)	2005994
335	18.4	0.0	0.3	chr2	62181485	62181550	(180011979)	+	FLAM_C	SINE/Alu	1	51	(82)	2005995
33	2.9	0.0	0.0	chr2	62181556	62181590	(180011939)	+	(AAG)n	Simple_repeat	1	35	(0)	2005996
228	23.2	1.2	13.7	chr2	62181898	62181992	(180011537)	C	L2c	LINE/L2	(12)	3375	3293	2005997
1138	19.2	2.4	0.8	chr2	64549995	64550236	(177643293)	+	L1MD2	LINE/L1	5565	5810	(549)	2009555
254	25.4	0.0	7.8	chr2	64550237	64550254	(177643275)	C	SVA_E	Retroposon/SVA	(1179)	203	192	2009556
797	16.1	5.3	0.0	chr2	64550255	64550378	(177643151)	+	FLAM_A	SINE/Alu	2	132	(10)	2009557
1139	23.1	12.8	5.8	chr2	64550379	64550677	(177642852)	+	L1MD2	LINE/L1	5817	6163	(196)	2009555
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
13	24.2	3.6	1.8	chr2	64751221	64751275	(177442254)	+	(GTGGAGG)n	Simple_repeat	1	57	(0)	2009878
8296	21.4	2.6	2.6	chr2	65044777	65046931	(177146598)	C	HERVIP10FH-int	LTR/ERV1	(3)	7600	3599	2010472
23881	6.7	0.9	0.1	chr2	68063791	68069896	(174123633)	+	L1PA5	LINE/L1	4	6153	(1)	2014983
501	30.7	7.7	5.6	chr2	68069924	68070264	(174123265)	+	L1ME4a	LINE/L1	5604	5952	(172)	2014984
1563	15.2	0.3	5.7	chr2	68419984	68420298	(173773231)	+	MER33	DNA/hAT-Charlie	20	317	(7)	2015584
22	0.0	0.0	0.0	chr2	69643086	69643109	(172550420)	+	(T)n	Simple_repeat	1	24	(0)	2017440
14	24.7	0.0	2.2	chr2	70946948	70946992	(171246537)	+	(CCTCTC)n	Simple_repeat	1	45	(0)	2019878
286	24.0	2.8	11.9	chr2	70947151	70947268	(171246261)	+	Charlie4z	DNA/hAT-Charlie	52	158	(9)	2019879
13094	17.0	5.0	2.0	chr2	78237051	78238950	(163954579)	+	Tigger4	DNA/TcMar-Tigger	212	2169	(562)	2030650
238	31.6	1.7	8.6	chr2	79217838	79217965	(162975564)	+	L2c	LINE/L2	3268	3386	(1)	2031961
2697	4.8	0.0	0.3	chr2	80406545	80406853	(161786676)	+	AluY	SINE/Alu	1	308	(3)	2033710
1943	27.7	5.7	3.6	chr2	83053732	83054316	(159139213)	C	MLT-int	LTR/ERVL-MaLR	(297)	1438	841	2037136
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
18	9.2	2.7	2.6	chr2	88191706	88191742	(154001787)	+	(CCCCCA)n	Simple_repeat	1	38	(0)	2045442
694	31.1	5.4	6.7	chr2	88191874	88192379	(154001150)	C	Charlie29a	DNA/hAT-Charlie	(31)	688	190	2045443
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
5205	19.1	21.5	8.2	chr2	95359092	95360572	(146832957)	C	MSTD-int	LTR/ERVL-MaLR	(2)	1733	2	2050570
12	24.4	4.4	4.2	chr2	96321923	96321990	(145871539)	+	(GGAGGC)n	Simple_repeat	1	71	(0)	2051942
616	15.3	8.3	0.0	chr2	97664455	97664565	(144528964)	C	FLAM_A	SINE/Alu	(10)	132	12	2053940
15	24.1	1.8	3.5	chr2	100819796	100819852	(141373677)	+	(CCCCAG)n	Simple_repeat	1	58	(0)	2058574
41	14.8	2.8	5.4	chr2	100820014	100820121	(141373408)	+	GA-rich	Low_complexity	1	111	(0)	2058575
26	23.5	1.3	2.5	chr2	100820198	100820275	(141373254)	+	(GCG)n	Simple_repeat	1	79	(0)	2058576
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
643	28.7	15.2	1.6	chr2	108968820	108969122	(133224407)	+	LTR37B	LTR/ERV1	114	457	(11)	2070060
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
334	17.9	3.6	0.9	chr2	109614414	109614520	(132579009)	+	MER52D	LTR/ERV1	373	482	(1641)	2070959
240	18.0	12.5	6.3	chr2	109614999	109615140	(132578389)	+	MER52D	LTR/ERV1	469	620	(1503)	2070959
329	8.5	1.5	3.4	chr2	113602929	113603477	(128590052)	+	(CTAACC)n	Simple_repeat	1	557	(0)	2077037
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
2149	11.5	0.0	2.8	chr2	118620643	118620963	(123572566)	+	AluSx	SINE/Alu	1	312	(0)	2083981
258	22.0	3.3	0.0	chr2	118621118	118621176	(123572353)	C	MIR1_Amn	SINE/MIR	(67)	163	103	2083982
17533	12.0	2.8	1.2	chr2	118921400	118923350	(123270179)	+	Tigger4	DNA/TcMar-Tigger	1	1996	(735)	2084447
561	23.6	7.1	7.6	chr2	121285536	121285600	(120907929)	+	L2a	LINE/L2	3198	3256	(170)	2088426
367	31.7	4.6	15.3	chr2	121297344	121297499	(120896030)	+	MIRb	SINE/MIR	114	260	(8)	2088458
1491	24.6	9.4	4.4	chr2	121297768	121297913	(120895616)	C	Kanga1d	DNA/TcMar-Tc2	(3)	606	455	2088460
1871	13.0	0.3	5.5	chr2	121297914	121298221	(120895308)	+	AluJo	SINE/Alu	1	292	(20)	2088461
1919	16.6	3.0	0.0	chr2	121440418	121440713	(120752816)	+	AluJb	SINE/Alu	1	305	(7)	2088695
384	18.0	21.6	5.1	chr2	126971826	126972001	(115221528)	+	MLT1H2	LTR/ERVL-MaLR	277	489	(0)	2096674
14	9.1	5.1	4.9	chr2	127701853	127701891	(114491638)	+	(GCGCTG)n	Simple_repeat	1	41	(0)	2097840
10671	24.8	1.6	0.9	chr2	128040542	128042869	(114150660)	+	HERVIP10F-int	LTR/ERV1	5393	7737	(0)	2098537
688	22.1	10.6	0.5	chr2	129207136	129207322	(112986207)	C	MLT1D	LTR/ERVL-MaLR	(8)	497	290	2100180
182	31.8	4.5	5.3	chr2	129698448	129698560	(112494969)	C	L2b	LINE/L2	(268)	3107	2996	2100736
248	26.8	4.3	3.5	chr2	131802146	131802261	(110391268)	+	MIRb	SINE/MIR	115	231	(37)	2103744
12254	15.5	3.2	2.1	chr2	132371199	132373089	(109820440)	C	ERV24_Prim-int	LTR/ERV1	(5587)	1988	78	2104492
4290	13.1	0.3	0.2	chr2	132373090	132373722	(109819807)	C	MER41B	LTR/ERV1	(0)	634	1	2104494
3705	18.0	3.9	4.2	chr2	134249227	134250034	(107943495)	C	L1MB8	LINE/L1	(0)	6178	5374	2107156
1538	14.0	0.0	0.0	chr2	135801667	135801873	(106391656)	C	AluSx	SINE/Alu	(105)	207	1	2109630
562	15.2	0.0	3.2	chr2	135801882	135801976	(106391553)	C	AluJb	SINE/Alu	(25)	287	196	2109631
2350	21.3	5.5	4.1	chr2	147103119	147103685	(95089844)	+	MLT1E2	LTR/ERVL-MaLR	52	627	(0)	2124801
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
34	5.3	0.0	0.0	chr2	147844401	147844440	(94349089)	+	(GCC)n	Simple_repeat	1	40	(0)	2125791
17	9.4	5.7	0.0	chr2	147844537	147844571	(94348958)	+	(GAGCCCG)n	Simple_repeat	1	37	(0)	2125792
36	19.1	3.3	1.1	chr2	147844582	147844672	(94348857)	+	(GCC)n	Simple_repeat	1	94	(0)	2125793
13	18.9	0.0	0.0	chr2	147844750	147844779	(94348750)	+	(GCC)n	Simple_repeat	1	30	(0)	2125794
14	9.0	4.9	7.0	chr2	147844870	147844910	(94348619)	+	(TTG)n	Simple_repeat	1	43	(0)	2125795
12	17.0	6.9	4.8	chr2	149330474	149330531	(92862998)	+	(CCGCGG)n	Simple_repeat	1	62	(0)	2127920
9859	9.3	1.1	14.9	chr2	150541289	150543121	(91650408)	C	LTR12C	LTR/ERV1	(0)	1579	3	2129508
634	30.8	9.2	7.6	chr2	150543122	150543420	(91650109)	+	HAL1	LINE/L1	322	655	(1852)	2129506
193	32.4	10.2	1.9	chr2	151409614	151409720	(90783809)	+	MIRc	SINE/MIR	22	138	(130)	2130856
21	9.5	0.0	0.0	chr2	151409773	151409806	(90783723)	+	(GGGAA)n	Simple_repeat	1	34	(0)	2130857
18	16.8	0.0	6.1	chr2	152335084	152335133	(89858396)	+	G-rich	Low_complexity	1	46	(0)	2132279
17322	15.9	1.6	2.5	chr2	155505587	155508571	(86684958)	+	L1PA16	LINE/L1	3530	6501	(2)	2136250
447	28.4	7.5	5.3	chr2	157336612	157336819	(84856710)	+	MIRb	SINE/MIR	26	238	(30)	2138611
18380	11.6	1.9	5.7	chr2	157928297	157929311	(84264218)	C	Tigger4	DNA/TcMar-Tigger	(867)	1864	876	2139462
2075	12.5	6.1	0.0	chr2	157929312	157929590	(84263939)	C	AluSx	SINE/Alu	(13)	299	3	2139464
21	4.2	0.0	0.0	chr2	159712088	159712112	(82481417)	+	(A)n	Simple_repeat	1	25	(0)	2142018
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
21	16.8	1.4	7.1	chr2	159798202	159798270	(82395259)	+	G-rich	Low_complexity	1	70	(0)	2142174
1869	21.8	6.2	1.7	chr2	159798406	159798945	(82394584)	C	L1MC4a	LINE/L1	(0)	7882	7317	2142175
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
328	24.2	0.0	0.0	chr2	161279238	161279303	(80914226)	C	MER47C	DNA/TcMar-Tigger	(31)	66	1	2144205
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
24	6.6	0.0	0.0	chr2	166376221	166376252	(75817277)	+	(GT)n	Simple_repeat	1	32	(0)	2150941
20	24.4	1.4	6.0	chr2	169734378	169734473	(72459056)	+	G-rich	Low_complexity	1	91	(0)	2155496
14	26.1	2.9	4.2	chr2	172084655	172084723	(70108806)	+	GA-rich	Low_complexity	1	71	(0)	2159581
6478	17.9	3.5	7.1	chr2	172539671	172540072	(69653457)	+	MER61-int	LTR/ERV1	3793	4189	(2999)	2160299
1978	15.7	0.0	0.0	chr2	172540073	172540365	(69653164)	+	AluSx1	SINE/Alu	5	297	(15)	2160303
13	26.9	3.8	0.0	chr2	172735765	172735817	(69457712)	+	(CCTCCCG)n	Simple_repeat	1	55	(0)	2160609
17	14.6	4.1	3.9	chr2	172735898	172735946	(69457583)	+	(GCGGAG)n	Simple_repeat	1	51	(0)	2160610
343	19.9	3.1	0.1	chr2	174244932	174245008	(67948521)	C	MER2B	DNA/TcMar-Tigger	(260)	85	2	2162942
450	22.8	9.0	12.8	chr2	174245170	174245365	(67948164)	+	Tigger19b	DNA/TcMar-Tigger	61	248	(302)	2162944
504	26.8	13.8	0.4	chr2	174788286	174788555	(67404974)	C	LTR107_Mam	LTR	(0)	570	259	2163831
4214	13.9	8.9	1.7	chr2	174788567	174789326	(67404203)	+	LTR1A2	LTR/ERV1	18	837	(0)	2163832
18	28.0	2.9	4.7	chr2	176092724	176092826	(66100703)	+	GA-rich	Low_complexity	1	106	(0)	2165652
25	15.8	6.9	1.3	chr2	176092850	176092924	(66100605)	+	G-rich	Low_complexity	1	79	(0)	2165653
13	5.3	0.0	0.0	chr2	176092979	176092998	(66100531)	+	(CGG)n	Simple_repeat	1	20	(0)	2165654
36	4.9	0.0	0.0	chr2	176093058	176093099	(66100430)	+	(GGC)n	Simple_repeat	1	42	(0)	2165655
12	13.9	0.0	8.1	chr2	176130327	176130363	(66063166)	+	(CGC)n	Simple_repeat	1	37	(0)	2165685
22	3.5	0.0	0.0	chr2	176130408	176130436	(66063093)	+	(GGC)n	Simple_repeat	1	29	(0)	2165686
23	16.7	0.0	0.0	chr2	176130549	176130595	(66062934)	+	(CCCGCA)n	Simple_repeat	1	47	(0)	2165687
19	20.9	0.0	0.0	chr2	176130686	176130734	(66062795)	+	(CCT)n	Simple_repeat	1	49	(0)	2165688
488	28.6	2.8	7.4	chr2	176506415	176506603	(65686926)	+	MIR3	SINE/MIR	21	200	(8)	2166239
1656	16.2	0.3	7.1	chr2	176506788	176506961	(65686568)	C	MLT1B	LTR/ERVL-MaLR	(50)	340	174	2166240
2178	10.7	0.7	2.7	chr2	176506962	176507259	(65686270)	C	AluSx1	SINE/Alu	(20)	292	1	2166241
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
14	25.2	5.0	3.6	chr2	177392828	177392907	(64800622)	+	G-rich	Low_complexity	1	84	(0)	2167595
1531	18.7	9.2	6.4	chr2	178111735	178112186	(64081343)	+	MER31B	LTR/ERV1	1	466	(0)	2168565
1674	26.3	7.3	6.1	chr2	181056705	181057523	(61136006)	+	L1MC4	LINE/L1	7210	8039	(3)	2172259
14	30.1	1.6	1.6	chr2	182716123	182716185	(59477344)	+	(CGCCAC)n	Simple_repeat	1	64	(0)	2174385
18	22.9	5.9	1.4	chr2	184598561	184598628	(57594901)	+	(GCC)n	Simple_repeat	1	72	(0)	2176765
23	26.5	1.2	2.5	chr2	184598877	184598956	(57594573)	+	(CGG)n	Simple_repeat	1	81	(0)	2176766
13994	17.4	2.4	4.0	chr2	184854134	184856909	(57336620)	+	Tigger4	DNA/TcMar-Tigger	1	2729	(2)	2177066
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
4634	26.8	8.4	3.5	chr2	188045747	188046794	(54146735)	+	MLT1A1-int	LTR/ERVL-MaLR	616	1735	(0)	2181149
339	27.0	13.9	10.2	chr2	191245109	191245343	(50948186)	+	L1M4b	LINE/L1	411	655	(6212)	2185587
19970	12.7	5.4	3.3	chr2	194379872	194384218	(47809311)	C	MER57-int	LTR/ERV1	(0)	7537	2190	2189601
13	13.2	6.7	4.2	chr2	196593438	196593482	(45600047)	+	(CCGCGGTG)n	Simple_repeat	1	48	(0)	2192634
23	21.9	0.0	0.0	chr2	196926620	196926672	(45266857)	+	(GCC)n	Simple_repeat	1	53	(0)	2193088
13	15.0	9.1	3.3	chr2	196926746	196926800	(45266729)	+	(GCGCCT)n	Simple_repeat	1	60	(0)	2193089
27	0.0	0.0	0.0	chr2	196927410	196927438	(45266091)	+	(A)n	Simple_repeat	1	29	(0)	2193090
5062	11.6	1.4	2.4	chr2	197686164	197687439	(44506090)	C	L1PB2	LINE/L1	(116)	6035	4783	2194488
612	22.3	12.8	0.9	chr2	199203285	199203488	(42990041)	+	MIR	SINE/MIR	21	263	(5)	2196545
46	0.0	0.0	0.0	chr2	203535259	203535300	(38658229)	+	(TGAC)n	Simple_repeat	1	42	(0)	2204168
33	12.7	1.6	1.6	chr2	203535304	203535365	(38658164)	+	(GGC)n	Simple_repeat	1	63	(0)	2204169
31	25.4	4.6	2.2	chr2	203535450	203535580	(38657949)	+	(CCGCCCG)n	Simple_repeat	1	137	(0)	2204170
52	0.0	0.0	0.0	chr2	210171296	210171342	(32022187)	+	(GCC)n	Simple_repeat	1	47	(0)	2214032
245	29.7	9.9	1.7	chr2	210477360	210477479	(31716050)	C	L3b	LINE/CR1	(134)	5098	4968	2214396
15708	14.1	3.5	1.5	chr2	212872374	212875046	(29318483)	+	Tigger4	DNA/TcMar-Tigger	2	2731	(0)	2217531
12	8.9	4.2	0.0	chr2	215409942	215409965	(26783564)	+	(GGT)n	Simple_repeat	1	25	(0)	2221046
23	20.3	5.3	1.3	chr2	215436150	215436224	(26757305)	+	(CCCG)n	Simple_repeat	1	79	(0)	2221075
13	13.6	2.9	2.9	chr2	215436365	215436398	(26757131)	+	G-rich	Low_complexity	1	35	(0)	2221076
51	5.2	0.0	1.6	chr2	216619984	216620045	(25573484)	+	(GT)n	Simple_repeat	1	62	(0)	2223127
24022	6.9	1.5	0.1	chr2	218102606	218108683	(24084846)	C	L1PA5	LINE/L1	(0)	6154	4	2225480
1508	19.9	7.4	3.7	chr2	218186969	218187317	(24006212)	C	MLT1A	LTR/ERVL-MaLR	(11)	363	1	2225598
319	25.7	11.4	0.9	chr2	218262418	218262527	(23931002)	C	MER102a	DNA/hAT-Charlie	(99)	231	109	2225745
12	19.7	0.0	0.0	chr2	218323319	218323347	(23870182)	+	(CTC)n	Simple_repeat	1	29	(0)	2225871
17	17.8	2.7	7.9	chr2	218323456	218323529	(23870000)	+	G-rich	Low_complexity	1	76	(0)	2225872
190	20.3	1.5	11.1	chr2	219441615	219441686	(22751843)	+	MIR1_Amn	SINE/MIR	77	141	(89)	2227959
43	29.4	2.1	3.1	chr2	219441859	219442050	(22751479)	+	(CGCCGC)n	Simple_repeat	1	196	(0)	2227960
549	24.4	9.1	2.4	chr2	221100296	221100481	(21093048)	C	MIR	SINE/MIR	(62)	200	5	2230530
1285	25.5	11.3	2.6	chr2	224146257	224146755	(18046774)	C	LTR48B	LTR/ERV1	(4)	640	93	2235459
264	19.6	0.0	1.8	chr2	224146740	224146796	(18046733)	C	LTR29	LTR/ERV1	(409)	213	158	2235460
11	6.7	5.4	7.7	chr2	226031344	226031380	(16162149)	+	(CCCCCTT)n	Simple_repeat	1	39	(0)	2238334
14	22.5	7.0	0.0	chr2	226031454	226031510	(16162019)	+	(GGCTGC)n	Simple_repeat	1	61	(0)	2238335
20	3.3	3.0	2.9	chr2	226799648	226799680	(15393849)	+	(CTC)n	Simple_repeat	1	34	(0)	2239468
8458	17.9	2.2	1.4	chr2	227582537	227583588	(14609941)	+	MSTB-int	LTR/ERVL-MaLR	1	1062	(589)	2240733
1801	17.8	2.0	0.3	chr2	229868216	229868502	(12325027)	C	AluJb	SINE/Alu	(20)	292	1	2244203
208	26.2	1.6	0.0	chr2	231052833	231052893	(11140636)	C	MIRb	SINE/MIR	(186)	82	21	2246150
2223	8.9	1.1	0.0	chr2	231907210	231907490	(10286039)	+	AluSc	SINE/Alu	12	295	(14)	2247881
237	28.7	14.4	0.0	chr2	231925179	231925279	(10268250)	+	MIR	SINE/MIR	35	152	(110)	2247911
2168	21.4	7.3	3.8	chr2	231968395	231968792	(10224737)	C	L1ME1	LINE/L1	(207)	6363	5964	2247980
2888	21.6	8.6	5.9	chr2	231968791	231968829	(10224700)	C	L1ME1	LINE/L1	(1717)	4820	4781	2247980
1827	14.4	10.8	2.9	chr2	231968830	231969179	(10224350)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2247982
2888	21.6	8.6	5.9	chr2	231969180	231969309	(10224220)	C	L1ME1	LINE/L1	(1757)	4780	4656	2247980
2303	9.1	1.0	0.0	chr2	233867790	233868087	(8325442)	C	AluSg	SINE/Alu	(9)	301	1	2251039
11	21.3	4.4	2.1	chr2	234496682	234496726	(7696803)	+	(CCGCCCG)n	Simple_repeat	1	47	(0)	2252076
20	6.9	0.0	0.0	chr2	234496974	234497004	(7696525)	+	(GCTCCC)n	Simple_repeat	1	31	(0)	2252077
38	27.5	1.7	5.0	chr2	234497099	234497275	(7696254)	+	(CCCCG)n	Simple_repeat	1	180	(0)	2252078
1525	5.0	0.0	0.0	chr2	234840213	234840392	(7353137)	+	MLT2A2	LTR/ERVL	382	561	(0)	2252631
26	3.1	3.0	0.0	chr2	235493983	235494015	(6699514)	+	(GGCGCG)n	Simple_repeat	1	34	(0)	2253735
1061	21.3	3.4	3.0	chr2	236456167	236456398	(5737131)	C	MIR	SINE/MIR	(10)	252	20	2255026
297	28.7	10.4	0.8	chr2	238202489	238202618	(3990911)	C	MER5B	DNA/hAT-Charlie	(0)	178	35	2257493
11015	12.0	0.4	0.0	chr2	240262022	240263645	(1929884)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2259866
16	17.8	5.4	5.1	chr2	240568783	240568838	(1624691)	+	(GC)n	Simple_repeat	1	59	(0)	2260181
14	22.1	3.6	3.5	chr2	241637029	241637084	(556445)	+	(GCCC)n	Simple_repeat	1	58	(0)	2261471
20	12.1	0.0	0.0	chr2	241637183	241637218	(556311)	+	(CCCGCC)n	Simple_repeat	1	36	(0)	2261472
1199	19.7	5.9	1.5	chr20	137102	137470	(64306697)	+	L1M2	LINE/L1	3364	3752	(3894)	2262283
1133	29.0	3.8	3.5	chr20	137496	138183	(64305984)	+	L1PA15-16	LINE/L1	850	1806	(5356)	2262284
210	32.3	13.8	1.5	chr20	266606	266941	(64177226)	C	L2a	LINE/L2	(133)	3293	2910	2262508
253	30.9	8.7	2.6	chr20	267225	267417	(64176750)	+	HERVL74-int	LTR/ERVL	3071	3276	(2409)	2262509
250	21.4	9.2	2.4	chr20	296917	297078	(64147089)	+	L1ME2z	LINE/L1	6243	6444	(0)	2262586
14	8.5	4.7	6.7	chr20	297647	297689	(64146478)	+	(CCCGGCGG)n	Simple_repeat	1	45	(0)	2262587
13	18.4	5.7	3.6	chr20	462515	462567	(63981600)	+	(CCGCGGC)n	Simple_repeat	1	56	(0)	2262991
192	26.9	20.0	6.3	chr20	462725	462835	(63981332)	+	MIR	SINE/MIR	118	247	(15)	2262992
14	35.9	0.0	0.0	chr20	653096	653162	(63791005)	+	(GCCCG)n	Simple_repeat	1	67	(0)	2263435
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
16	14.2	0.0	0.0	chr20	653539	653569	(63790598)	+	(GCGGGG)n	Simple_repeat	1	31	(0)	2263437
945	25.6	1.7	1.1	chr20	653689	653915	(63790252)	C	MIR	SINE/MIR	(32)	230	3	2263438
13	27.3	3.4	1.6	chr20	728423	728481	(63715686)	+	(GGCGC)n	Simple_repeat	1	61	(0)	2263618
9630	25.2	4.0	2.4	chr20	784843	787236	(63656931)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	5170	2263747
2711	17.1	5.1	7.7	chr20	930663	931933	(63512234)	C	MER4-int	LTR/ERV1	(2581)	4017	1720	2264043
21	12.4	3.5	5.0	chr20	1185780	1185837	(63258330)	+	(CTCCCCA)n	Simple_repeat	1	60	(0)	2264565
18	21.0	3.5	1.7	chr20	1894251	1894308	(62549859)	+	(CCCCCCG)n	Simple_repeat	1	59	(0)	2265847
447	10.3	0.0	10.3	chr20	2509586	2509672	(61934495)	+	AluJo	SINE/Alu	137	214	(98)	2267085
14	24.4	0.0	2.2	chr20	2652173	2652218	(61791949)	+	G-rich	Low_complexity	1	46	(0)	2267366
32	7.4	0.0	0.0	chr20	2652733	2652775	(61791392)	+	(GGGCCT)n	Simple_repeat	1	43	(0)	2267367
20	17.2	5.6	4.0	chr20	2840134	2840204	(61603963)	+	(CCGCG)n	Simple_repeat	1	75	(0)	2267676
15	13.9	0.0	0.0	chr20	2873523	2873546	(61570621)	+	(CG)n	Simple_repeat	1	24	(0)	2267731
17	27.7	2.4	4.6	chr20	2873554	2873638	(61570529)	+	(GCC)n	Simple_repeat	1	87	(0)	2267732
13	24.0	1.4	8.0	chr20	4249526	4249599	(60194568)	+	(CCCTCC)n	Simple_repeat	1	75	(0)	2270439
19	16.4	7.9	1.5	chr20	4249705	4249767	(60194400)	+	(CTGCGGA)n	Simple_repeat	1	68	(0)	2270440
298	31.2	2.1	0.7	chr20	5529635	5529773	(58914394)	C	MIRb	SINE/MIR	(56)	212	72	2272693
829	32.6	4.5	4.0	chr20	7458757	7458841	(56985326)	+	MLT1K	LTR/ERVL-MaLR	193	278	(317)	2275897
2484	16.0	1.9	0.2	chr20	7458842	7459266	(56984901)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2275898
829	32.6	4.5	4.0	chr20	7459267	7459579	(56984588)	+	MLT1K	LTR/ERVL-MaLR	279	593	(2)	2275897
22	23.8	3.7	2.9	chr20	8132151	8132248	(56311919)	+	G-rich	Low_complexity	1	98	(0)	2276800
22	16.7	4.8	1.5	chr20	8132567	8132628	(56311539)	+	(CCCGCGC)n	Simple_repeat	1	65	(0)	2276801
492	29.4	3.4	2.7	chr20	9161112	9161258	(55282909)	C	MIRb	SINE/MIR	(100)	168	21	2278486
2101	11.9	0.9	0.6	chr20	16410388	16410732	(48033435)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	2386	2289294
6926	14.4	2.5	1.1	chr20	16410733	16411929	(48032238)	C	Tigger4	DNA/TcMar-Tigger	(1513)	1218	4	2289295
1047	27.1	1.0	0.7	chr20	16541639	16541928	(47902239)	C	LTR16A	LTR/ERVL	(2)	449	159	2289487
29	0.0	0.0	0.0	chr20	17226798	17226825	(47217342)	+	(CGCTG)n	Simple_repeat	1	28	(0)	2290532
28	13.6	0.0	4.8	chr20	17226843	17226904	(47217263)	+	(GGCCG)n	Simple_repeat	1	62	(0)	2290533
19	12.9	2.3	2.2	chr20	17681880	17681924	(46762243)	+	(GGCGGCG)n	Simple_repeat	1	45	(0)	2291261
39	0.0	0.0	0.0	chr20	18059395	18059430	(46384737)	+	(GGA)n	Simple_repeat	1	36	(0)	2292020
13	11.2	14.6	0.0	chr20	18138192	18138239	(46305928)	+	(TGCGGC)n	Simple_repeat	1	55	(0)	2292194
13	3.7	0.0	11.4	chr20	23421480	23421514	(41022653)	+	(CGCAGG)n	Simple_repeat	1	35	(0)	2299690
77	1.2	3.6	0.0	chr20	25066239	25066321	(39377846)	+	(ATAG)n	Simple_repeat	1	86	(0)	2301661
16	22.7	4.2	4.0	chr20	25585610	25585681	(38858486)	+	G-rich	Low_complexity	1	75	(0)	2302423
740	10.6	0.0	0.0	chr20	25585927	25586030	(38858137)	+	Tigger4a	DNA/TcMar-Tigger	1	104	(132)	2302424
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
24	25.8	0.0	2.6	chr20	30290568	30290644	(34153523)	+	G-rich	Low_complexity	1	77	(0)	2304833
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
4636	22.9	5.1	7.7	chr20	30625824	30628238	(33815929)	C	L1PA13	LINE/L1	(3745)	3021	486	2305284
29	29.8	2.9	2.1	chr20	30814535	30814670	(33629497)	+	(ACAC)n	Simple_repeat	1	140	(0)	2305474
249	32.4	4.4	0.9	chr20	31738608	31738716	(32705451)	+	MIR	SINE/MIR	40	152	(110)	2306769
214	28.7	2.1	5.0	chr20	31739669	31739767	(32704400)	C	MIR	SINE/MIR	(42)	220	125	2306770
2120	11.7	0.0	2.3	chr20	33553233	33553531	(30890636)	C	AluSz	SINE/Alu	(20)	292	1	2311055
747	20.4	5.0	2.6	chr20	33553541	33553696	(30890471)	C	MER58A	DNA/hAT-Charlie	(16)	208	49	2311056
396	22.5	20.2	1.3	chr20	33553736	33554110	(30890057)	C	Charlie21a	DNA/hAT-Charlie	(0)	1213	762	2311057
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
14	23.1	3.4	3.3	chr20	34676761	34676819	(29767348)	+	(CCCCCCG)n	Simple_repeat	1	61	(0)	2313589
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
18	17.5	0.0	0.0	chr20	36592386	36592417	(27851750)	+	(T)n	Simple_repeat	1	32	(0)	2317964
15	22.0	0.0	2.3	chr20	36592418	36592429	(27851738)	+	(TTTTTCT)n	Simple_repeat	1	44	(0)	2317965
13	31.4	2.8	1.4	chr20	36745817	36745888	(27698279)	+	(GGCGG)n	Simple_repeat	1	74	(0)	2318339
47	0.0	0.0	0.0	chr20	36746080	36746121	(27698046)	+	(GCG)n	Simple_repeat	1	42	(0)	2318340
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
270	23.8	1.2	4.5	chr20	37693715	37693753	(26750414)	+	MIRc	SINE/MIR	114	152	(116)	2320607
13	24.1	3.1	4.5	chr20	41137372	41137435	(23306732)	+	G-rich	Low_complexity	1	66	(0)	2327096
13	14.8	0.0	3.1	chr20	41137476	41137507	(23306660)	+	(GCCCC)n	Simple_repeat	1	32	(0)	2327097
11454	20.7	2.1	3.7	chr20	41597270	41599672	(22844495)	+	HERVIP10B3-int	LTR/ERV1	5238	7602	(1)	2327764
1821	20.6	1.9	1.2	chr20	43849387	43849804	(20594363)	C	Charlie4a	DNA/hAT-Charlie	(51)	457	37	2332119
1895	13.8	0.3	0.7	chr20	44424988	44425278	(20018889)	C	AluSx1	SINE/Alu	(18)	294	5	2333473
428	32.8	16.8	5.4	chr20	44425279	44425643	(20018524)	C	L2b	LINE/L2	(597)	2822	2451	2333472
2062	14.6	0.0	1.6	chr20	44425644	44425959	(20018208)	C	AluJr	SINE/Alu	(1)	311	1	2333474
367	29.1	45.2	0.0	chr20	44678225	44678379	(19765788)	C	L2	LINE/L2	(349)	3070	2846	2334061
612	30.1	4.2	5.1	chr20	44678452	44678784	(19765383)	C	L2c	LINE/L2	(100)	3287	2958	2334062
18	14.1	0.0	8.9	chr20	46364476	46364531	(18079636)	+	G-rich	Low_complexity	1	56	(0)	2337537
12	20.8	0.0	2.9	chr20	46364531	46364565	(18079602)	+	(GTCTG)n	Simple_repeat	1	35	(0)	2337538
256	27.7	13.3	4.4	chr20	47383888	47384023	(17060144)	C	MIRb	SINE/MIR	(68)	200	51	2339889
319	22.9	22.4	0.0	chr20	47501517	47501634	(16942533)	+	MIR	SINE/MIR	111	262	(0)	2340295
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
16	18.3	2.2	2.2	chr20	47502034	47502078	(16942089)	+	(AGGCGG)n	Simple_repeat	1	46	(0)	2340297
278	31.2	0.0	1.0	chr20	49219044	49219140	(15225027)	C	L1ME4a	LINE/L1	(84)	6040	5945	2343879
14	15.4	1.6	9.7	chr20	49713638	49713698	(14730469)	+	(GCGGCA)n	Simple_repeat	1	62	(0)	2345095
39	23.3	1.5	4.5	chr20	49713734	49713864	(14730303)	+	(CCG)n	Simple_repeat	1	133	(0)	2345096
29	0.0	0.0	3.1	chr20	49714246	49714277	(14729890)	+	(TCAT)n	Simple_repeat	1	32	(0)	2345097
689	29.0	13.7	2.1	chr20	49714283	49714712	(14729455)	C	L2a	LINE/L2	(18)	3408	2921	2345098
17	18.2	0.0	0.0	chr20	49982913	49982943	(14461224)	+	(C)n	Simple_repeat	1	31	(0)	2345774
4151	17.4	5.9	3.6	chr20	52467021	52467549	(11976618)	C	MER21B	LTR/ERVL	(6)	862	310	2351582
3723	7.1	2.8	0.2	chr20	52467550	52468031	(11976136)	C	L1PA8	LINE/L1	(0)	6172	5678	2351583
288	32.6	3.4	4.4	chr20	54185914	54186093	(10258074)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	2355225
283	24.0	4.5	10.4	chr20	56358503	56358646	(8085521)	C	ORSL-2a	DNA/hAT-Tip100	(180)	162	28	2358871
12	13.2	5.7	2.7	chr20	56358737	56358771	(8085396)	+	G-rich	Low_complexity	1	37	(0)	2358874
18	9.8	4.1	5.9	chr20	56359085	56359133	(8085034)	+	(GCGCCCT)n	Simple_repeat	1	51	(0)	2358875
12	14.7	3.3	0.0	chr20	56359112	56359141	(8085026)	+	(CCCTGG)n	Simple_repeat	1	31	(0)	2358876
2342	11.9	0.0	0.0	chr20	57095905	57096216	(7347951)	C	AluSq2	SINE/Alu	(1)	312	1	2360531
430	28.7	4.1	0.1	chr20	57096217	57096375	(7347792)	C	MER106B	DNA/hAT-Charlie	(36)	1023	896	2360532
199	31.1	5.1	0.0	chr20	57096560	57096633	(7347534)	+	L2b	LINE/L2	3286	3363	(12)	2360530
12	20.1	2.9	0.0	chr20	58389170	58389203	(6054964)	+	(GCGT)n	Simple_repeat	1	35	(0)	2362853
28	0.0	0.0	0.0	chr20	58389208	58389234	(6054933)	+	(TGCG)n	Simple_repeat	1	27	(0)	2362854
11	24.1	0.0	0.0	chr20	63740465	63740498	(703669)	+	(GGACGG)n	Simple_repeat	1	34	(0)	2369965
2287	8.4	0.3	0.0	chr20	63796544	63796828	(647339)	+	AluSq2	SINE/Alu	1	286	(27)	2370039
15	4.1	0.0	6.9	chr20	64063098	64063126	(381041)	+	(GCGG)n	Simple_repeat	1	29	(0)	2370474
392	31.8	5.0	2.6	chr20	64097551	64097705	(346462)	C	MER5A	DNA/hAT-Charlie	(14)	175	17	2370497
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1738	18.7	0.7	1.0	chr21	9144154	9144447	(37565536)	C	AluJb	SINE/Alu	(18)	294	2	2374279
3424	21.2	4.9	9.9	chr21	9144448	9144867	(37565116)	C	LTR49-int	LTR/ERV1	(1760)	4571	4283	2374278
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1951	29.8	4.7	5.4	chr21	9816509	9817787	(36892196)	C	SST1	Satellite/centr	(11)	1552	284	2374893
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1322	15.6	0.8	0.3	chr21	12965815	12997132	(33712851)	C	ALR/Alpha	Satellite/centr	(65)	31468	1	2375877
27	3.5	0.0	0.0	chr21	15730357	15730386	(30979597)	+	(CGC)n	Simple_repeat	1	30	(0)	2379541
15	29.9	2.8	1.4	chr21	15730497	15730573	(30979410)	+	(CGGCCC)n	Simple_repeat	1	78	(0)	2379542
12	5.6	0.0	0.0	chr21	17612698	17612716	(29097267)	+	(CCG)n	Simple_repeat	1	19	(0)	2381936
3845	23.2	7.6	6.3	chr21	20218178	20219233	(26490750)	+	MLT1A1-int	LTR/ERVL-MaLR	666	1735	(0)	2385365
11276	19.3	2.3	0.9	chr21	23180157	23182323	(23527660)	C	Tigger4	DNA/TcMar-Tigger	(533)	2198	2	2389303
3541	27.5	3.5	7.3	chr21	23431151	23432980	(23277003)	+	MSTD-int	LTR/ERVL-MaLR	2	1637	(14)	2389629
3188	4.6	0.5	0.0	chr21	26530467	26530861	(20179122)	C	L1PA7	LINE/L1	(2)	6152	5756	2394144
3441	11.8	0.2	1.0	chr21	26530862	26531364	(20178619)	+	Tigger4	DNA/TcMar-Tigger	904	1402	(1329)	2394145
1407	18.0	7.8	8.0	chr21	26531365	26531739	(20178244)	+	THE1D	LTR/ERVL-MaLR	3	376	(5)	2394146
11279	13.4	1.2	1.6	chr21	28589767	28591552	(18118431)	+	Tigger4	DNA/TcMar-Tigger	2	1780	(951)	2396964
339	31.3	2.2	1.5	chr21	31865998	31866130	(14843853)	C	MIRc	SINE/MIR	(46)	222	89	2402235
17	17.0	2.0	3.9	chr21	33543503	33543552	(13166431)	+	(CCTCCG)n	Simple_repeat	1	51	(0)	2405206
7133	22.5	7.7	3.8	chr21	33747169	33748181	(12961802)	+	L1M4a1	LINE/L1	1240	2294	(285)	2405562
7124	23.5	2.9	4.5	chr21	34826812	34828574	(11881409)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	2407223
472	25.0	4.3	2.4	chr21	36860174	36860346	(9849637)	C	MIR	SINE/MIR	(88)	174	4	2410569
16	18.1	5.8	1.8	chr21	36860513	36860564	(9849419)	+	(AATTTT)n	Simple_repeat	1	55	(0)	2410570
1475	27.4	5.2	6.3	chr21	37578485	37579026	(9130957)	C	L1MEf	LINE/L1	(4957)	2080	1336	2411822
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
985	26.1	11.8	7.0	chr21	37841474	37842149	(8867834)	C	L1ME4a	LINE/L1	(1)	6123	5411	2412198
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
309	23.1	22.1	1.5	chr21	41678833	41678968	(5031015)	+	MIRb	SINE/MIR	23	194	(74)	2417844
772	18.6	3.1	6.0	chr21	41678981	41679180	(5030803)	+	MLT1H	LTR/ERVL-MaLR	1	194	(355)	2417845
242	23.8	11.6	1.2	chr21	42332313	42332397	(4377586)	+	MIRc	SINE/MIR	103	197	(71)	2418733
2719	3.9	0.3	0.0	chr21	43776979	43777288	(2932695)	C	AluY	SINE/Alu	(0)	311	1	2420780
21	28.4	1.0	5.0	chr21	44012380	44012478	(2697505)	+	(GCCGG)n	Simple_repeat	1	100	(0)	2421180
92	32.3	0.5	3.6	chr21	45555140	45555555	(1154428)	+	G-rich	Low_complexity	1	418	(0)	2422926
18	22.5	1.3	6.5	chr21	46097947	46098022	(611961)	+	(CCGCCTC)n	Simple_repeat	1	77	(0)	2423505
13	10.7	6.7	0.0	chr21	46098050	46098079	(611904)	+	(GGCGG)n	Simple_repeat	1	32	(0)	2423506
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
789	15.4	0.7	0.0	chr22	12069769	12069917	(38748551)	+	L1PB1	LINE/L1	6000	6149	(2)	2425652
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
21	16.0	4.1	0.0	chr22	16601252	16601300	(34217168)	+	(CCGGAG)n	Simple_repeat	1	51	(0)	2427582
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
21899	6.9	0.8	1.5	chr22	19935776	19938863	(30879605)	+	HERVK11-int	LTR/ERVK	1	3067	(4886)	2432709
14	16.4	2.9	0.0	chr22	20320135	20320168	(30498300)	+	(CCGCC)n	Simple_repeat	1	35	(0)	2433108
1857	17.6	0.7	3.5	chr22	20843210	20843527	(29974941)	+	AluJo	SINE/Alu	1	309	(3)	2434039
307	20.0	1.4	4.1	chr22	20843677	20843749	(29974719)	C	MIRc	SINE/MIR	(98)	170	100	2434040
15	11.2	7.5	0.0	chr22	20858648	20858672	(29959796)	+	(GGAGCC)n	Simple_repeat	1	27	(0)	2434077
29	3.2	0.0	0.0	chr22	20858673	20858704	(29959764)	+	(CCGCCT)n	Simple_repeat	1	32	(0)	2434078
15	11.2	7.5	0.0	chr22	20858705	20858718	(29959750)	+	(GGAGCC)n	Simple_repeat	4	18	(0)	2434079
33	28.0	2.7	3.3	chr22	21867413	21867558	(28950910)	+	(CCG)n	Simple_repeat	1	150	(0)	2436079
12	9.8	0.0	0.0	chr22	21867625	21867646	(28950822)	+	(TGCC)n	Simple_repeat	1	22	(0)	2436080
19	24.2	1.7	1.6	chr22	21867648	21867707	(28950761)	+	G-rich	Low_complexity	1	61	(0)	2436081
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
575	22.0	4.4	0.3	chr22	22981622	22981887	(27836581)	+	PABL_A-int	LTR/ERV1	2411	2571	(2444)	2437606
1366	11.8	1.0	0.0	chr22	22982043	22982237	(27836231)	+	HUERS-P3-int	LTR/ERV1	8720	8916	(3)	2437607
228	33.0	15.8	1.0	chr22	23142202	23142324	(27676144)	C	MIRb	SINE/MIR	(27)	241	98	2437814
265	22.4	2.9	0.0	chr22	23858142	23858208	(26960260)	C	MER20B	DNA/hAT-Charlie	(490)	293	225	2439085
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
534	28.5	2.9	0.6	chr22	25770423	25770588	(25047880)	+	MER117	DNA/hAT-Charlie	8	177	(20)	2442815
710	28.0	11.8	11.0	chr22	26417458	26417894	(24400574)	+	LTR33	LTR/ERVL	21	461	(54)	2444303
212	29.3	11.5	1.6	chr22	26512712	26512836	(24305632)	+	MIR	SINE/MIR	80	218	(44)	2444474
2054	12.8	1.6	1.3	chr22	26517997	26518301	(24300167)	C	AluJr	SINE/Alu	(6)	306	1	2444491
913	20.9	1.8	1.9	chr22	26518447	26518684	(24299784)	+	L1MC4a	LINE/L1	7680	7882	(0)	2444492
1362	29.5	10.8	2.4	chr22	26935183	26935721	(23882747)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	4	2445512
210	28.3	10.8	0.0	chr22	26936060	26936158	(23882310)	C	L2c	LINE/L2	(231)	3156	3046	2445513
26	19.0	4.4	5.3	chr22	28773015	28773138	(22045330)	+	G-rich	Low_complexity	1	122	(0)	2449171
305	20.0	0.0	3.0	chr22	28773181	28773247	(22045221)	C	MIR	SINE/MIR	(118)	144	80	2449172
380	30.6	7.7	4.8	chr22	29992848	29993036	(20825432)	C	MIRc	SINE/MIR	(26)	242	48	2451776
210	19.6	10.4	3.8	chr22	29993045	29993114	(20825354)	C	L2a	LINE/L2	(55)	3371	3264	2451777
1522	23.0	9.2	3.4	chr22	30166938	30167409	(20651059)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	1	2452062
998	9.6	0.0	0.7	chr22	30425368	30425503	(20392965)	C	FLAM_C	SINE/Alu	(8)	135	1	2452586
190	29.6	13.6	3.6	chr22	30425520	30425631	(20392837)	C	MIRb	SINE/MIR	(121)	147	23	2452587
242	22.7	6.4	3.3	chr22	30426026	30426116	(20392352)	C	MIRc	SINE/MIR	(88)	180	87	2452588
31	6.0	0.0	6.7	chr22	30968842	30968901	(19849567)	+	(GCC)n	Simple_repeat	1	60	(0)	2453682
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
541	32.7	10.8	5.3	chr22	32593421	32594153	(18224315)	C	L2	LINE/L2	(731)	2688	1911	2457298
362	26.7	3.2	2.2	chr22	32594188	32594325	(18224143)	C	L2a	LINE/L2	(30)	3396	3239	2457299
302	30.7	10.2	2.6	chr22	32594350	32594466	(18224002)	C	MIRb	SINE/MIR	(100)	168	42	2457300
540	30.6	8.6	8.6	chr22	32985687	32986154	(17832314)	+	L2c	LINE/L2	2910	3377	(10)	2458133
236	32.7	10.3	0.0	chr22	32986182	32986294	(17832174)	C	MER91B	DNA/hAT-Tip100	(49)	141	16	2458134
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
966	28.6	9.3	5.3	chr22	33228906	33230004	(17588464)	+	L1MEd	LINE/L1	321	1483	(5620)	2458611
1140	22.4	9.1	4.9	chr22	35628918	35629134	(15189334)	C	MLT1J2	LTR/ERVL-MaLR	(18)	430	197	2463466
2312	11.2	0.0	0.0	chr22	35629135	35629438	(15189030)	+	AluSq	SINE/Alu	1	304	(9)	2463467
12	11.3	6.9	0.0	chr22	36028709	36028737	(14789731)	+	(CCCGC)n	Simple_repeat	1	31	(0)	2464175
17	17.9	2.6	0.0	chr22	36028932	36028970	(14789498)	+	G-rich	Low_complexity	1	40	(0)	2464176
1181	27.6	4.6	11.9	chr22	36122868	36123259	(14695209)	C	MLT1I	LTR/ERVL-MaLR	(51)	360	2	2464435
288	23.4	7.9	3.8	chr22	36123260	36123282	(14695186)	+	Charlie22a	DNA/hAT-Charlie	466	491	(0)	2464434
14	26.4	1.6	4.6	chr22	36123292	36123355	(14695113)	+	GA-rich	Low_complexity	1	65	(0)	2464437
506	28.2	0.0	0.0	chr22	36643339	36643455	(14175013)	C	L2a	LINE/L2	(9)	3417	3301	2465543
60	3.3	0.0	0.0	chr22	36643462	36643524	(14174944)	+	(ATCT)n	Simple_repeat	1	63	(0)	2465544
428	28.5	4.5	4.5	chr22	36643575	36643776	(14174692)	C	L4_B_Mam	LINE/RTE-X	(97)	4844	4643	2465545
733	26.8	4.3	1.8	chr22	36643791	36644006	(14174462)	C	MIR	SINE/MIR	(41)	227	2	2465546
1585	26.7	8.7	4.4	chr22	37263909	37264479	(13553989)	C	LTR67B	LTR/ERVL	(0)	620	23	2466842
2230	11.3	0.0	0.0	chr22	37266436	37266726	(13551742)	C	AluSx	SINE/Alu	(7)	305	15	2466848
12	8.1	3.6	3.5	chr22	37658752	37658779	(13159689)	+	(CGGC)n	Simple_repeat	1	29	(0)	2467752
17	21.0	0.0	5.5	chr22	37843852	37843918	(12974550)	+	(GCCCC)n	Simple_repeat	1	63	(0)	2468201
13	8.5	4.0	0.0	chr22	37905914	37905938	(12912530)	+	(GGC)n	Simple_repeat	1	26	(0)	2468378
12	17.4	7.0	4.9	chr22	37906164	37906220	(12912248)	+	(GGC)n	Simple_repeat	1	61	(0)	2468379
28	19.3	5.5	4.3	chr22	37906307	37906415	(12912053)	+	(CGGAGC)n	Simple_repeat	1	115	(0)	2468380
17	12.2	4.0	5.8	chr22	38398524	38398573	(12419895)	+	GA-rich	Low_complexity	1	52	(0)	2469395
2339	10.0	0.3	0.0	chr22	39191967	39192275	(11626193)	C	AluSx4	SINE/Alu	(0)	310	1	2471089
2250	22.6	2.6	15.6	chr22	39192276	39192444	(11626024)	+	L1MD1	LINE/L1	617	677	(5956)	2471088
1930	16.5	2.6	0.3	chr22	39192445	39192747	(11625721)	+	AluJb	SINE/Alu	1	310	(2)	2471090
207	38.1	0.5	1.5	chr22	39623160	39624212	(11194256)	+	(TG)n	Simple_repeat	1	1058	(0)	2472050
16	0.0	0.0	0.0	chr22	40856967	40856984	(9961484)	+	(A)n	Simple_repeat	1	18	(0)	2474500
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
427	23.7	16.6	6.4	chr22	41448756	41448895	(9369573)	+	MIRb	SINE/MIR	56	212	(56)	2475932
13	21.6	6.2	0.0	chr22	42519858	42519905	(8298563)	+	(CCCGC)n	Simple_repeat	1	51	(0)	2478260
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
12	24.6	3.6	3.5	chr22	43186826	43186881	(7631587)	+	(CCG)n	Simple_repeat	1	58	(0)	2479779
26	0.0	0.0	0.0	chr22	44828426	44828450	(5990018)	+	(T)n	Simple_repeat	1	25	(0)	2482734
2115	10.7	1.7	1.0	chr22	44828458	44828747	(5989721)	C	AluSz	SINE/Alu	(20)	292	1	2482735
209	22.4	0.0	0.0	chr22	46268400	46268448	(4550020)	C	MIRc	SINE/MIR	(120)	148	100	2485279
2266	4.2	0.0	1.1	chr22	46268668	46268986	(4549482)	C	AluYk3	SINE/Alu	(0)	311	1	2485280
15839	14.6	2.0	4.7	chr22	46866405	46868533	(3949935)	+	Tigger4	DNA/TcMar-Tigger	675	2729	(2)	2486158
2477	9.3	0.0	0.0	chr22	47125971	47126281	(3692187)	C	AluSx	SINE/Alu	(1)	311	1	2486458
18	11.1	2.3	4.5	chr22	49962317	49962359	(856109)	+	(CCCT)n	Simple_repeat	1	44	(0)	2490004
15	24.4	3.8	0.0	chr22	49962360	49962365	(856103)	+	(GCTCCCC)n	Simple_repeat	5	55	(0)	2490005
23	19.0	3.9	3.8	chr22	50185845	50185921	(632547)	+	(CCCGC)n	Simple_repeat	1	80	(0)	2490311
19	31.1	2.1	2.1	chr22	50186029	50186122	(632346)	+	G-rich	Low_complexity	1	96	(0)	2490312
1931	7.9	2.7	0.0	chr22	50543885	50544138	(274330)	C	AluSx1	SINE/Alu	(12)	300	40	2490842
290	36.9	12.2	3.4	chr3	4302698	4302859	(193992700)	C	L2	LINE/L2	(1312)	2107	1919	2498773
39	2.6	0.0	0.0	chr3	9397652	9397691	(188897868)	+	(GCC)n	Simple_repeat	1	40	(0)	2507136
468	25.6	5.9	2.2	chr3	11126560	11126739	(187168820)	C	LTR33	LTR/ERVL	(302)	213	27	2510800
188	21.2	7.0	0.0	chr3	11126766	11126845	(187168714)	C	L2a	LINE/L2	(291)	3135	3050	2510798
842	26.7	11.0	2.7	chr3	11126953	11127414	(187168145)	C	L2a	LINE/L2	(323)	3103	2595	2510801
39455	18.4	1.9	1.7	chr3	14039451	14047032	(184248527)	C	HERVIP10B3-int	LTR/ERV1	(3)	7600	1	2516242
23	29.8	2.1	2.0	chr3	15859410	15859506	(182436053)	+	(CGC)n	Simple_repeat	1	99	(0)	2519512
34	2.3	2.1	4.1	chr3	15859563	15859610	(182435949)	+	(CGC)n	Simple_repeat	1	49	(0)	2519512
12	12.6	3.7	0.0	chr3	15859664	15859690	(182435869)	+	(CTTC)n	Simple_repeat	1	28	(0)	2519513
15	14.1	0.0	3.0	chr3	15859706	15859738	(182435821)	+	(CCG)n	Simple_repeat	1	33	(0)	2519514
277	14.8	0.0	0.0	chr3	22902285	22902338	(175393221)	+	L1ME3Cz	LINE/L1	670	723	(274)	2529346
2015	20.0	4.7	4.9	chr3	22902417	22902868	(175392691)	+	MER74C	LTR/ERVL	10	460	(0)	2529347
5235	25.2	8.4	10.1	chr3	23625515	23627281	(174668278)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	2530421
24	32.4	2.1	4.1	chr3	23945008	23945149	(174350410)	+	GA-rich	Low_complexity	1	145	(0)	2531073
18	6.0	8.6	0.0	chr3	23945493	23945527	(174350032)	+	(CGG)n	Simple_repeat	1	38	(0)	2531074
12	23.1	2.0	4.0	chr3	23945800	23945848	(174349711)	+	(GCCCG)n	Simple_repeat	1	50	(0)	2531075
233	32.5	3.1	0.0	chr3	25897307	25897429	(172398130)	+	MLT1N2	LTR/ERVL-MaLR	434	560	(2)	2534005
290	13.5	1.9	0.0	chr3	27976486	27976537	(170319022)	+	L2a	LINE/L2	3374	3426	(0)	2537102
16	5.3	0.0	0.0	chr3	30042281	30042300	(168253259)	+	(AC)n	Simple_repeat	1	20	(0)	2539981
263	33.5	0.3	0.8	chr3	32948056	32948172	(165347387)	+	MIRc	SINE/MIR	39	159	(109)	2545011
2087	10.6	0.3	0.7	chr3	32948182	32948464	(165347095)	+	AluSq	SINE/Alu	1	282	(31)	2545012
29	25.1	5.2	1.6	chr3	33440050	33440165	(164855394)	+	(GCC)n	Simple_repeat	1	122	(0)	2545866
26	24.9	1.2	2.4	chr3	33440394	33440477	(164855082)	+	(CGCCC)n	Simple_repeat	1	85	(0)	2545867
1813	17.8	0.3	1.4	chr3	33836574	33836860	(164458699)	+	AluJb	SINE/Alu	1	284	(28)	2546545
29	0.0	2.5	4.9	chr3	33836861	33836900	(164458659)	+	(AAAT)n	Simple_repeat	1	41	(0)	2546546
2382	9.2	0.7	0.0	chr3	33836916	33837219	(164458340)	C	AluSp	SINE/Alu	(7)	306	1	2546547
14	5.0	0.0	0.0	chr3	39153565	39153585	(159141974)	+	(CGG)n	Simple_repeat	1	21	(0)	2554043
484	33.0	9.3	3.4	chr3	39181187	39181516	(159114043)	+	L2a	LINE/L2	3068	3422	(4)	2554103
21	9.7	4.1	3.9	chr3	43286102	43286153	(155009406)	+	(TATGTA)n	Simple_repeat	1	52	(0)	2560421
13	4.5	0.0	7.4	chr3	43286331	43286357	(155009202)	+	(TCC)n	Simple_repeat	1	27	(0)	2560422
16	12.7	0.0	5.3	chr3	43286463	43286500	(155009059)	+	(CGCCC)n	Simple_repeat	1	38	(0)	2560423
311	34.8	8.1	5.9	chr3	43286717	43287040	(155008519)	+	L1M4b	LINE/L1	338	669	(6198)	2560424
334	24.5	5.0	1.1	chr3	44480756	44480850	(153814709)	+	L2a	LINE/L2	3328	3426	(0)	2562169
1188	15.8	0.3	6.3	chr3	44480893	44481150	(153814409)	+	LTR54	LTR/ERV1	167	471	(39)	2562170
2639	22.5	8.4	7.7	chr3	44746952	44747484	(153548075)	C	MSTC-int	LTR/ERVL-MaLR	(311)	1340	847	2562606
322	23.0	7.5	0.0	chr3	44747569	44747642	(153547917)	C	MamTip3	DNA/hAT-Tip100	(194)	306	227	2562609
193	27.6	11.1	1.0	chr3	45593479	45593586	(152701973)	+	MIR	SINE/MIR	40	158	(50)	2564110
17	15.7	2.2	4.3	chr3	45594048	45594093	(152701466)	+	(CGCC)n	Simple_repeat	1	47	(0)	2564111
2340	10.1	0.7	0.7	chr3	47465854	47466161	(150829398)	+	AluSc	SINE/Alu	2	309	(0)	2567201
13	7.0	6.2	2.9	chr3	49018144	49018175	(149277384)	+	(GCGAG)n	Simple_repeat	1	34	(0)	2570480
221	33.1	3.2	5.7	chr3	49094659	49094850	(149200709)	+	L2b	LINE/L2	3015	3201	(174)	2570662
13	16.1	7.7	3.6	chr3	49411696	49411747	(148883812)	+	(GGC)n	Simple_repeat	1	56	(0)	2571302
22	0.0	0.0	0.0	chr3	49672026	49672049	(148623510)	+	(T)n	Simple_repeat	1	24	(0)	2571782
13	14.2	3.2	0.0	chr3	49869937	49869967	(148425592)	+	G-rich	Low_complexity	1	32	(0)	2572130
283	36.8	6.1	0.6	chr3	51974363	51974518	(146321041)	+	MIRb	SINE/MIR	30	194	(74)	2575245
14	19.2	3.9	3.8	chr3	52705593	52705643	(145589916)	+	(GCCCC)n	Simple_repeat	1	53	(0)	2576322
13	18.4	7.0	0.0	chr3	52897677	52897719	(145397840)	+	G-rich	Low_complexity	1	46	(0)	2576620
313	21.1	6.9	4.0	chr3	56437985	56438049	(141857510)	+	L1ME4a	LINE/L1	6019	6090	(34)	2582126
3354	11.4	1.6	0.2	chr3	56438050	56438539	(141857020)	+	LOR1a	LTR/ERV1	1	497	(0)	2582127
507	21.0	6.8	0.0	chr3	57065503	57065626	(141229933)	+	L1MB7	LINE/L1	6036	6168	(16)	2583295
674	17.9	11.4	0.0	chr3	57065935	57066051	(141229508)	+	FLAM_A	SINE/Alu	1	132	(10)	2583296
19	0.0	0.0	0.0	chr3	57906051	57906071	(140389488)	+	(A)n	Simple_repeat	1	21	(0)	2584906
2241	9.2	0.0	0.7	chr3	57906293	57906617	(140388942)	C	AluSz6	SINE/Alu	(0)	312	1	2584907
20638	9.5	1.4	1.6	chr3	58891473	58893043	(139402516)	C	L1PA10	LINE/L1	(684)	6925	5380	2586756
6990	3.3	0.5	0.3	chr3	63779992	63781587	(134513972)	C	L1PA4	LINE/L1	(0)	6155	4557	2594643
780	29.4	2.0	2.0	chr3	63781776	63782028	(134513531)	C	MIR	SINE/MIR	(2)	260	8	2594644
2200	17.9	2.1	7.4	chr3	63851380	63851892	(134443667)	+	LTR54	LTR/ERV1	1	485	(25)	2594784
796	26.5	5.6	10.2	chr3	63851897	63852287	(134443272)	+	MST-int	LTR/ERVL-MaLR	664	1035	(616)	2594785
275	24.4	9.7	7.8	chr3	63852294	63852435	(134443124)	+	L1ME4b	LINE/L1	718	862	(30)	2594786
14	14.6	0.0	3.1	chr3	63912111	63912142	(134383417)	+	(CGGA)n	Simple_repeat	1	32	(0)	2594888
35	0.0	0.0	0.0	chr3	63912685	63912716	(134382843)	+	(GCA)n	Simple_repeat	1	32	(0)	2594889
578	21.7	8.1	1.4	chr3	73144822	73144960	(125150599)	+	MLT1J	LTR/ERVL-MaLR	1	142	(370)	2610706
35	36.2	1.9	0.0	chr3	75667645	75667803	(122627756)	+	G-rich	Low_complexity	1	162	(0)	2614559
886	23.7	3.8	2.1	chr3	75786831	75787170	(122508389)	+	MER66A	LTR/ERV1	93	438	(40)	2614704
5807	12.9	13.9	1.6	chr3	79059515	79060592	(119234967)	+	MER11B	LTR/ERVK	1	1232	(4)	2618976
18	4.0	0.0	0.0	chr3	80865228	80865253	(117430306)	+	(TTTG)n	Simple_repeat	1	26	(0)	2621321
616	37.2	5.9	2.8	chr3	80899312	80900095	(117395464)	C	HERVL-int	LTR/ERVL	(2399)	3255	2429	2621360
1440	26.7	8.4	0.2	chr3	80900111	80900504	(117395055)	+	LTR108a_Mam	LTR/ERVL	83	511	(0)	2621361
5855	27.3	6.2	1.3	chr3	86778323	86779958	(111515601)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	14	2628670
12	10.0	0.0	0.0	chr3	87267586	87267607	(111027952)	+	(TTGT)n	Simple_repeat	1	22	(0)	2629323
1561	21.8	1.0	0.7	chr3	87267609	87267906	(111027653)	C	AluJr	SINE/Alu	(13)	299	1	2629324
1749	26.7	6.5	0.7	chr3	87552469	87553095	(110742464)	+	L1MEc	LINE/L1	2264	2933	(3386)	2629682
16	24.5	3.3	1.6	chr3	88475996	88476055	(109819504)	+	(TCTCCT)n	Simple_repeat	1	62	(0)	2630888
3400	16.0	2.8	1.8	chr3	88970624	88971235	(109324324)	C	LTR31	LTR/ERV1	(0)	619	2	2631466
54	0.0	0.0	0.0	chr3	90182325	90182373	(108113186)	+	(TATT)n	Simple_repeat	1	49	(0)	2632867
1562	12.9	10.9	0.8	chr3	90182374	90182629	(108112930)	C	AluSx1	SINE/Alu	(27)	285	1	2632868
9928	14.5	1.6	2.0	chr3	96500001	96501660	(101793899)	+	Tigger4	DNA/TcMar-Tigger	17	1669	(1062)	2636757
13	13.6	2.9	2.9	chr3	97821959	97821992	(100473567)	+	G-rich	Low_complexity	1	35	(0)	2638281
12074	9.4	2.3	2.1	chr3	98110498	98111312	(100184247)	+	MER61-int	LTR/ERV1	1413	2237	(2980)	2638629
2085	14.5	0.3	0.3	chr3	98111313	98111615	(100183944)	C	AluSx1	SINE/Alu	(5)	307	5	2638630
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
344	14.5	6.2	3.8	chr3	100334447	100334525	(97961034)	+	MER63B	DNA/hAT-Blackjack	354	434	(2)	2641563
2439	9.4	0.7	0.0	chr3	100819670	100819976	(97475583)	+	AluSg	SINE/Alu	1	309	(1)	2642227
1587	12.9	2.4	2.0	chr3	101426980	101427206	(96868353)	+	L1PA13	LINE/L1	4243	4476	(2290)	2642990
2015	15.5	0.0	0.3	chr3	101427207	101427509	(96868050)	+	AluSz6	SINE/Alu	1	302	(10)	2642993
19	3.8	0.0	0.0	chr3	101779608	101779634	(96515925)	+	(GGCGG)n	Simple_repeat	1	27	(0)	2643594
3584	15.6	1.9	4.9	chr3	102084768	102085483	(96210076)	C	L1MB1	LINE/L1	(0)	6168	5475	2644039
6263	19.7	5.4	5.4	chr3	103436959	103438587	(94856972)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	2645790
272	38.5	1.0	1.0	chr3	103459906	103460102	(94835457)	+	LTR33A_	LTR/ERVL	277	473	(58)	2645824
241	34.8	7.1	7.9	chr3	104703161	104703503	(93592056)	C	L2c	LINE/L2	(905)	2514	2175	2647293
15	24.9	1.9	1.8	chr3	112086265	112086318	(86209241)	+	(CCGCT)n	Simple_repeat	1	55	(0)	2657367
16	13.2	0.0	9.8	chr3	113696289	113696339	(84599220)	+	(CCGCCC)n	Simple_repeat	1	51	(0)	2659586
18	20.7	4.2	4.0	chr3	113696340	113696359	(84599200)	+	(GCCGCCC)n	Simple_repeat	2	75	(0)	2659587
18	17.7	0.0	0.0	chr3	113696645	113696676	(84598883)	+	(C)n	Simple_repeat	1	32	(0)	2659588
979	21.6	12.8	2.4	chr3	115886044	115886294	(82409265)	C	MLT2B1	LTR/ERVL	(234)	286	6	2662734
20473	8.6	2.0	0.7	chr3	120003777	120009853	(78285706)	+	L1PA7	LINE/L1	5	6154	(0)	2668482
761	18.2	1.5	1.5	chr3	122513786	122513917	(75781642)	+	FLAM_A	SINE/Alu	1	132	(10)	2672115
687	27.6	6.1	3.0	chr3	123542175	123542524	(74753035)	+	L1ME4c	LINE/L1	28	385	(445)	2673879
344	31.5	9.1	11.0	chr3	123883880	123884307	(74411252)	+	L1M4b	LINE/L1	187	605	(6262)	2674439
30	3.1	0.0	0.0	chr3	123884352	123884384	(74411175)	+	(GGGCG)n	Simple_repeat	1	33	(0)	2674440
16	22.7	5.0	3.2	chr3	123884399	123884458	(74411101)	+	GA-rich	Low_complexity	1	63	(0)	2674441
318	31.8	3.6	0.0	chr3	123884733	123884839	(74410720)	+	MIR3	SINE/MIR	43	153	(55)	2674442
20	20.0	3.4	1.6	chr3	125375018	125375029	(72920530)	+	(CCGCCC)n	Simple_repeat	1	36	(25)	2676880
19	22.6	0.0	0.0	chr3	125375030	125375070	(72920489)	+	(C)n	Simple_repeat	1	41	(0)	2676881
20	20.0	3.4	1.6	chr3	125375071	125375076	(72920483)	+	(CCGCCC)n	Simple_repeat	37	61	(0)	2676880
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
24	14.0	5.5	0.0	chr3	127629607	127629661	(70665898)	+	(CGTGTG)n	Simple_repeat	1	58	(0)	2680398
38	8.0	0.0	0.0	chr3	129605267	129605319	(68690240)	+	(CCG)n	Simple_repeat	1	53	(0)	2684060
14	15.0	2.4	4.8	chr3	130517100	130517140	(67778419)	+	G-rich	Low_complexity	1	42	(0)	2685612
2467	5.3	0.0	0.3	chr3	130747252	130747580	(67547979)	C	AluSc8	SINE/Alu	(0)	311	1	2685927
2182	9.6	1.0	2.3	chr3	130747581	130747745	(67547814)	C	AluSz	SINE/Alu	(13)	299	139	2685928
2500	2.8	1.7	2.1	chr3	130747746	130748035	(67547524)	C	AluYc	SINE/Alu	(10)	289	1	2685929
188	17.1	0.0	10.9	chr3	134317787	134317832	(63977727)	C	LFSINE_Vert	SINE/tRNA	(39)	420	380	2691276
12	11.1	3.2	3.1	chr3	135965575	135965605	(62329954)	+	G-rich	Low_complexity	1	32	(0)	2693591
333	32.5	11.8	5.3	chr3	135965611	135965668	(62329891)	C	L1MEc	LINE/L1	(6337)	530	465	2693576
28	3.3	0.0	0.0	chr3	135965669	135965699	(62329860)	+	(GAG)n	Simple_repeat	1	31	(0)	2693592
333	32.5	11.8	5.3	chr3	135965700	135965939	(62329620)	C	L1MEc	LINE/L1	(6403)	464	210	2693576
17	17.2	4.2	2.0	chr3	135965941	135965988	(62329571)	+	(GGCCG)n	Simple_repeat	1	50	(0)	2693593
18	4.0	0.0	0.0	chr3	135966037	135966062	(62329497)	+	(CGGTG)n	Simple_repeat	1	26	(0)	2693594
15	5.8	10.5	2.4	chr3	136751804	136751841	(61543718)	+	G-rich	Low_complexity	1	42	(0)	2695002
13	9.8	9.1	0.0	chr3	136752057	136752089	(61543470)	+	(GCTC)n	Simple_repeat	1	36	(0)	2695003
6005	16.2	4.9	0.7	chr3	138644725	138644991	(59650568)	C	L1M2b	LINE/L1	(2568)	4994	4725	2697862
2231	11.7	0.3	0.0	chr3	138644992	138645282	(59650277)	C	AluSp	SINE/Alu	(21)	292	1	2697863
934	12.5	0.0	2.9	chr3	138699365	138699500	(59596059)	+	AluSx	SINE/Alu	1	132	(180)	2697951
2015	27.8	4.9	17.0	chr3	138699574	138699919	(59595640)	+	L1MC4	LINE/L1	6448	6758	(1124)	2697952
18	17.6	6.7	0.0	chr3	138834892	138834936	(59460623)	+	(GC)n	Simple_repeat	1	48	(0)	2698265
19	4.0	0.0	0.0	chr3	138835008	138835033	(59460526)	+	(GCG)n	Simple_repeat	1	26	(0)	2698266
4994	28.5	11.2	4.8	chr3	139024189	139026607	(59268952)	+	L2a	LINE/L2	698	3285	(141)	2698725
646	26.1	10.1	0.5	chr3	139628710	139628898	(58666661)	+	MIRb	SINE/MIR	52	260	(8)	2699624
2106	22.6	7.2	3.8	chr3	139628991	139629522	(58666037)	+	MLT1F2	LTR/ERVL-MaLR	1	552	(8)	2699625
10007	17.9	1.3	1.1	chr3	140705193	140706839	(57588720)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	2	2701195
14	15.3	2.6	2.6	chr3	141402302	141402339	(56893220)	+	G-rich	Low_complexity	1	39	(0)	2702239
21	18.3	6.5	0.0	chr3	141402473	141402534	(56893025)	+	(CGCGG)n	Simple_repeat	1	66	(0)	2702240
354	28.8	7.5	2.0	chr3	141737830	141738029	(56557530)	C	L2a	LINE/L2	(0)	3426	3165	2702770
2686	4.5	0.0	0.3	chr3	141801029	141801338	(56494221)	+	AluY	SINE/Alu	1	309	(2)	2702875
1504	19.6	11.0	9.7	chr3	141801339	141801892	(56493667)	+	L1MC5	LINE/L1	8728	9291	(13)	2702874
2484	10.5	0.0	0.3	chr3	141962355	141962658	(56332901)	C	AluSx	SINE/Alu	(8)	304	2	2703235
425	26.7	2.5	0.0	chr3	141962816	141962931	(56332628)	+	MER94	DNA/hAT-Blackjack	15	133	(1)	2703236
239	27.2	4.9	8.7	chr3	141962932	141963080	(56332479)	C	MIRc	SINE/MIR	(21)	247	105	2703237
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
698	24.8	8.8	2.8	chr3	143850379	143850664	(54444895)	+	MER102a	DNA/hAT-Charlie	26	330	(0)	2706245
14	26.8	3.2	6.1	chr3	143971700	143971794	(54323765)	+	(CCGCTC)n	Simple_repeat	1	98	(0)	2706423
14977	16.2	1.7	4.1	chr3	144377392	144379302	(53916257)	C	Tigger4	DNA/TcMar-Tigger	(718)	2013	160	2706969
15	20.2	4.8	4.6	chr3	148991651	148991712	(49303847)	+	(CCG)n	Simple_repeat	1	65	(0)	2712870
15	11.5	2.3	6.8	chr3	148992096	148992138	(49303421)	+	(CGGCCC)n	Simple_repeat	1	44	(0)	2712871
3960	16.9	1.2	1.1	chr3	149300071	149300832	(48994727)	+	MER72B	LTR/ERV1	1	763	(5)	2713353
670	16.8	8.3	0.7	chr3	150032814	150032957	(48262602)	C	MIR	SINE/MIR	(0)	262	107	2714570
661	29.7	15.1	6.2	chr3	150864646	150865277	(47430282)	C	L2c	LINE/L2	(153)	3234	2554	2715962
41	0.0	0.0	0.0	chr3	150865494	150865528	(47430031)	+	(GT)n	Simple_repeat	1	35	(0)	2715963
16	9.6	0.0	0.0	chr3	150865529	150865551	(47430008)	+	(CG)n	Simple_repeat	1	23	(0)	2715964
380	25.0	10.5	2.3	chr3	154715839	154715969	(43579590)	+	MIR	SINE/MIR	105	247	(15)	2721550
380	28.6	10.8	5.4	chr3	155027476	155027623	(43267936)	+	L2c	LINE/L2	2977	3136	(251)	2721929
218	25.9	4.5	0.0	chr3	155027806	155027886	(43267673)	+	L2c	LINE/L2	3334	3426	(0)	2721929
22	25.3	0.0	1.7	chr3	155676512	155676599	(42618960)	+	(CA)n	Simple_repeat	1	86	(0)	2722802
320	27.7	5.5	0.8	chr3	155869965	155870084	(42425475)	C	MamRep1879	DNA/hAT-Tip100?	(85)	131	6	2723193
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
12	23.4	4.6	4.4	chr3	156816720	156816784	(41478775)	+	G-rich	Low_complexity	1	68	(0)	2724605
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
529	20.0	9.8	4.0	chr3	162764126	162764250	(35531309)	+	AluSx	SINE/Alu	1	133	(179)	2733002
1132	27.1	5.1	7.7	chr3	162764255	162764694	(35530865)	C	LTR40A1	LTR/ERVL	(10)	574	147	2733003
1202	29.6	3.6	3.8	chr3	165087205	165087706	(33207853)	+	L1MCc	LINE/L1	793	1293	(5130)	2735750
4382	20.1	2.6	1.8	chr3	166070828	166071702	(32223857)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	770	2737058
278	20.4	0.0	0.0	chr3	166071707	166071755	(32223804)	+	THE1D-int	LTR/ERVL-MaLR	1082	1130	(501)	2737059
6466	21.4	2.3	0.0	chr3	166071762	166072999	(32222560)	+	MSTA-int	LTR/ERVL-MaLR	365	1631	(0)	2737060
41	0.0	0.0	0.0	chr3	167876881	167876915	(30418644)	+	(TG)n	Simple_repeat	1	35	(0)	2739306
289	33.3	5.9	0.0	chr3	167876947	167877057	(30418502)	+	MLT1K	LTR/ERVL-MaLR	476	593	(2)	2739307
193	25.0	4.5	3.0	chr3	167877188	167877253	(30418306)	C	L2a	LINE/L2	(2)	3424	3358	2739308
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
13	14.4	3.2	0.0	chr3	170357188	170357218	(27938341)	+	G-rich	Low_complexity	1	32	(0)	2742885
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
253	29.7	0.0	10.6	chr3	171456598	171456710	(26838849)	+	Plat_L3	LINE/CR1	3478	3578	(8)	2744552
532	27.1	2.1	8.3	chr3	171456851	171457055	(26838504)	+	MIR3	SINE/MIR	6	197	(11)	2744553
274	27.9	1.2	8.1	chr3	172142640	172142725	(26152834)	+	L2c	LINE/L2	3283	3362	(25)	2745669
1640	18.6	0.8	4.6	chr3	172142754	172143125	(26152434)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	8	2745670
19	20.3	0.0	0.0	chr3	173396011	173396046	(24899513)	+	(GT)n	Simple_repeat	1	36	(0)	2747507
18	0.0	0.0	0.0	chr3	173396061	173396083	(24899476)	+	(GGC)n	Simple_repeat	1	23	(0)	2747508
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
15	19.9	0.0	0.0	chr3	174441718	174441746	(23853813)	+	(T)n	Simple_repeat	1	29	(0)	2748990
13	28.1	0.0	6.0	chr3	174441747	174441784	(23853775)	+	(TTCTT)n	Simple_repeat	1	67	(0)	2748991
12	24.9	2.0	3.9	chr3	179148365	179148415	(19147144)	+	(TGC)n	Simple_repeat	1	52	(0)	2755688
18	28.2	1.3	2.6	chr3	179148416	179148454	(19147105)	+	(CCGCTG)n	Simple_repeat	5	92	(0)	2755689
14	20.6	2.6	0.0	chr3	179451212	179451250	(18844309)	+	(CCCGC)n	Simple_repeat	1	40	(0)	2756238
35	23.2	3.9	5.0	chr3	179451502	179451656	(18843903)	+	(CGCGGCG)n	Simple_repeat	1	161	(0)	2756239
12	14.4	0.0	0.0	chr3	183636873	183636896	(14658663)	+	(GCC)n	Simple_repeat	1	24	(0)	2763074
19	25.1	2.2	5.5	chr3	186567280	186567368	(11728191)	+	(CGC)n	Simple_repeat	1	91	(0)	2768577
1972	9.3	6.1	1.1	chr3	186616697	186616976	(11678583)	+	AluSx	SINE/Alu	1	295	(17)	2768665
11	21.3	9.3	0.0	chr3	186930900	186930953	(11364606)	+	G-rich	Low_complexity	1	59	(0)	2769260
261	29.3	7.2	4.0	chr3	191682833	191683006	(6612553)	C	LTR78	LTR/ERV1	(19)	1285	1106	2776873
406	21.1	8.4	5.6	chr3	194140531	194140699	(4154860)	+	MIR3	SINE/MIR	18	185	(23)	2780608
3297	14.7	12.3	2.1	chr3	196337312	196337931	(1957628)	+	MER50	LTR/ERV1	20	711	(23)	2784802
181	34.6	10.5	2.2	chr3	196337961	196338099	(1957460)	C	L2c	LINE/L2	(179)	3208	3057	2784800
575	36.1	9.1	1.2	chr3	197185198	197185603	(1109956)	+	MamGyp-int	LTR/Gypsy	3350	3790	(1313)	2786483
14	14.3	2.4	4.7	chr3	198148192	198148233	(147326)	+	(GAGCCTA)n	Simple_repeat	1	43	(0)	2788181
21	17.0	2.2	0.0	chr4	28431	28476	(190186079)	+	(TCTC)n	Simple_repeat	1	47	(0)	2788542
20	18.8	3.0	4.4	chr4	973589	973654	(189240901)	+	G-rich	Low_complexity	1	68	(0)	2789731
1144	32.6	9.8	3.0	chr4	1588834	1590282	(188624273)	C	L1MA8	LINE/L1	(1837)	4309	2735	2790325
24	18.1	5.1	5.8	chr4	2261981	2262078	(187952477)	+	(CCGC)n	Simple_repeat	1	103	(0)	2791326
3482	11.8	2.9	5.1	chr4	3054058	3054704	(187159851)	+	MER57-int	LTR/ERV1	3704	4250	(3287)	2792677
7449	14.1	1.6	5.4	chr4	4883648	4884105	(185330450)	+	Tigger4	DNA/TcMar-Tigger	829	1239	(1492)	2795647
870	14.4	0.0	0.0	chr4	4884106	4884223	(185330332)	C	AluJo	SINE/Alu	(194)	118	1	2795648
7449	14.1	1.6	5.4	chr4	4884224	4884301	(185330254)	+	Tigger4	DNA/TcMar-Tigger	1240	1310	(1421)	2795647
1722	18.3	6.5	0.0	chr4	4884302	4884591	(185329964)	C	AluJr	SINE/Alu	(2)	310	1	2795649
12	19.6	0.0	0.0	chr4	6783542	6783570	(183430985)	+	(CTCCC)n	Simple_repeat	1	29	(0)	2799090
24	23.1	4.0	6.2	chr4	6783607	6783731	(183430824)	+	G-rich	Low_complexity	1	130	(0)	2799091
18	21.2	4.3	6.2	chr4	8269877	8269968	(181944587)	+	(GGCGCCC)n	Simple_repeat	1	96	(0)	2801512
432	25.3	6.9	2.7	chr4	8270462	8270621	(181943934)	C	MIR3	SINE/MIR	(34)	174	22	2801513
37	21.8	2.7	2.6	chr4	8892462	8892573	(181321982)	+	(CCTCC)n	Simple_repeat	1	115	(0)	2802429
5463	25.5	8.2	3.4	chr4	13106510	13108156	(177106399)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	2808808
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
29	7.9	0.0	0.0	chr4	18021687	18021727	(172192828)	+	(GCG)n	Simple_repeat	1	41	(0)	2817243
13	23.9	0.0	2.4	chr4	18021876	18021916	(172192639)	+	(CTCCC)n	Simple_repeat	1	41	(0)	2817244
2022	33.3	11.0	2.7	chr4	19125070	19126546	(171088009)	C	L2a	LINE/L2	(921)	2498	885	2819020
35	0.0	0.0	0.0	chr4	24419353	24419382	(165795173)	+	(GT)n	Simple_repeat	1	30	(0)	2827094
3069	25.2	8.5	3.2	chr4	24954224	24955001	(165259554)	C	MLT-int	LTR/ERVL-MaLR	(444)	1291	469	2828034
33	0.0	2.9	0.0	chr4	25160484	25160518	(165054037)	+	(AAAAC)n	Simple_repeat	1	36	(0)	2828388
568	31.0	13.1	1.1	chr4	25901839	25902109	(164312446)	C	L2a	LINE/L2	(1)	3425	3107	2829971
14832	15.5	3.1	3.6	chr4	27835109	27837852	(162376703)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	1	2833195
1671	25.9	2.4	4.1	chr4	30379790	30380628	(159833927)	C	L1PA17	LINE/L1	(4668)	2185	1453	2836636
338	15.4	7.1	0.0	chr4	30380624	30380688	(159833867)	C	L1PA17	LINE/L1	(6799)	350	281	2836636
946	24.6	19.1	2.7	chr4	39367831	39368236	(150846319)	+	MLT1H1	LTR/ERVL-MaLR	66	553	(2)	2849473
345	16.7	0.0	0.0	chr4	39368265	39368312	(150846243)	+	AluYk11	SINE/Alu	1	48	(263)	2849474
18	8.5	0.0	0.0	chr4	39368323	39368347	(150846208)	+	(A)n	Simple_repeat	1	25	(0)	2849475
3472	15.0	0.7	0.3	chr4	39368348	39368937	(150845618)	C	Tigger4	DNA/TcMar-Tigger	(1489)	1242	651	2849476
352	31.0	5.0	3.4	chr4	40980880	40981056	(149233499)	+	MER5A	DNA/hAT-Charlie	7	186	(3)	2853225
1665	10.7	8.7	0.4	chr4	40981159	40981391	(149233164)	+	AluSc	SINE/Alu	37	290	(19)	2853226
2225	10.5	0.0	2.6	chr4	42162696	42162999	(148051556)	C	AluSq	SINE/Alu	(16)	297	2	2855170
412	10.4	0.0	5.6	chr4	42163000	42163033	(148051522)	+	MLT1B	LTR/ERVL-MaLR	360	389	(1)	2855169
19	19.4	4.0	6.5	chr4	42163118	42163191	(148051364)	+	(AT)n	Simple_repeat	1	77	(0)	2855171
1571	16.6	1.5	0.4	chr4	42163381	42163639	(148050916)	+	AluJo	SINE/Alu	34	295	(17)	2855172
15202	13.3	5.8	1.5	chr4	42827532	42830143	(147384412)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	2	2856141
5889	27.1	5.8	2.7	chr4	43052336	43053959	(147160596)	+	MSTD-int	LTR/ERVL-MaLR	41	1722	(13)	2856455
1815	27.1	9.3	9.0	chr4	47730777	47731588	(142482967)	C	L2	LINE/L2	(525)	2894	2070	2862685
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
21	18.9	2.1	0.0	chr4	52038234	52038281	(138176274)	+	(GCC)n	Simple_repeat	1	49	(0)	2865622
13	15.1	6.2	3.9	chr4	52659371	52659418	(137555137)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	2866515
191	34.7	10.1	0.0	chr4	53491460	53491557	(136722998)	+	L2b	LINE/L2	3263	3371	(4)	2867760
17718	12.6	3.1	3.9	chr4	53981050	53981931	(136232624)	C	Tigger4	DNA/TcMar-Tigger	(970)	1761	930	2868547
1839	16.0	1.6	4.4	chr4	53981932	53982249	(136232306)	C	AluJo	SINE/Alu	(2)	310	2	2868552
13	13.1	0.0	0.0	chr4	55546669	55546694	(134667861)	+	(CCTTC)n	Simple_repeat	1	26	(0)	2871092
12	15.3	8.1	0.0	chr4	55546695	55546700	(134667855)	+	(CTCCCC)n	Simple_repeat	6	40	(0)	2871093
20	20.6	2.0	0.0	chr4	56049161	56049210	(134165345)	+	(TGC)n	Simple_repeat	1	51	(0)	2871924
14	24.6	3.3	3.2	chr4	56049218	56049278	(134165277)	+	(GCCG)n	Simple_repeat	1	63	(0)	2871925
12	13.6	6.8	4.3	chr4	56049424	56049467	(134165088)	+	G-rich	Low_complexity	1	47	(0)	2871926
10753	14.1	2.5	1.8	chr4	61350462	61351742	(128862813)	+	Tigger1	DNA/TcMar-Tigger	5	1290	(1128)	2879297
32	0.0	3.0	0.0	chr4	61351743	61351775	(128862780)	+	(AGAAAA)n	Simple_repeat	1	34	(0)	2879298
10753	14.1	2.5	1.8	chr4	61351776	61352252	(128862303)	+	Tigger1	DNA/TcMar-Tigger	1291	1774	(644)	2879297
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
13	19.2	6.1	1.9	chr4	72569320	72569368	(117645187)	+	(GCTGCTG)n	Simple_repeat	1	52	(0)	2893670
4517	22.1	2.4	0.6	chr4	73964879	73965923	(116248632)	C	L1PA12	LINE/L1	(5676)	1109	6	2895556
24	17.9	3.5	0.0	chr4	77075446	77075502	(113139053)	+	(CCT)n	Simple_repeat	1	59	(0)	2900311
20	16.3	0.0	5.6	chr4	77075643	77075696	(113138859)	+	G-rich	Low_complexity	1	54	(0)	2900312
18	12.6	0.0	0.0	chr4	77075885	77075911	(113138644)	+	(A)n	Simple_repeat	1	27	(0)	2900313
21	17.5	3.6	1.8	chr4	77075912	77075937	(113138618)	+	A-rich	Low_complexity	3	57	(0)	2900314
30	0.0	0.0	0.0	chr4	77819050	77819075	(112395480)	+	(AC)n	Simple_repeat	1	26	(0)	2901221
14	10.4	3.0	2.9	chr4	78057372	78057404	(112157151)	+	(GCGGT)n	Simple_repeat	1	34	(0)	2901638
34	7.5	0.0	0.0	chr4	78058104	78058146	(112156409)	+	(GT)n	Simple_repeat	1	43	(0)	2901639
12	19.1	3.8	5.5	chr4	78776078	78776130	(111438425)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	2902733
19	10.9	0.0	6.7	chr4	78776289	78776333	(111438222)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2902734
15	7.6	8.9	4.1	chr4	78776337	78776381	(111438174)	+	G-rich	Low_complexity	1	49	(0)	2902735
27	19.1	2.7	2.6	chr4	78776577	78776651	(111437904)	+	(GGCGGC)n	Simple_repeat	1	77	(0)	2902736
326	32.2	9.8	0.6	chr4	78991129	78991303	(111223252)	+	MIRb	SINE/MIR	5	197	(71)	2903053
1311	30.3	4.2	4.5	chr4	78991378	78991906	(111222649)	C	LTR79	LTR/ERVL	(0)	527	1	2903054
17	24.7	0.0	0.0	chr4	79576491	79576529	(110638026)	+	(GT)n	Simple_repeat	1	39	(0)	2903772
5565	24.9	6.1	3.6	chr4	79820281	79821741	(110392814)	C	MLT1A1-int	LTR/ERVL-MaLR	(235)	1500	1	2904058
13	9.4	5.3	5.0	chr4	83485208	83485245	(106729310)	+	G-rich	Low_complexity	1	40	(0)	2909614
13	12.2	3.7	0.0	chr4	86935280	86935306	(103279249)	+	(CCG)n	Simple_repeat	1	28	(0)	2914647
5390	15.8	2.2	0.3	chr4	89640644	89641493	(100573062)	+	LTR1D	LTR/ERV1	1	866	(109)	2918926
262	15.2	4.2	0.0	chr4	89641479	89641524	(100573031)	+	LTR1D	LTR/ERV1	700	747	(0)	2918926
1493	24.8	6.0	6.2	chr4	91064258	91064808	(99149747)	C	MER68B	LTR/ERVL	(2)	562	13	2920753
3021	20.7	7.3	0.4	chr4	91506655	91507420	(98707135)	C	L1MB7	LINE/L1	(3)	6679	5857	2921249
93	9.8	1.3	1.9	chr4	92006479	92006630	(98207925)	+	(TCTT)n	Simple_repeat	1	154	(0)	2921795
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
14	11.0	0.0	5.9	chr4	92306021	92306054	(97908501)	+	(ACACAT)n	Simple_repeat	1	34	(0)	2922097
69	0.0	0.0	0.0	chr4	92477040	92477098	(97737457)	+	(TG)n	Simple_repeat	1	59	(0)	2922327
23	0.0	0.0	0.0	chr4	94757884	94757908	(95456647)	+	(A)n	Simple_repeat	1	25	(0)	2925516
3502	17.9	0.8	1.0	chr4	97413687	97414291	(92800264)	+	ERVL47-int	LTR/ERVL	1101	1704	(3542)	2928886
6727	14.8	1.5	0.5	chr4	97414290	97415329	(92799226)	+	ERVL47-int	LTR/ERVL	2255	3305	(1941)	2928886
3630	24.7	5.4	2.4	chr4	97585287	97586981	(92627574)	+	L1MDa	LINE/L1	459	2171	(4462)	2929082
18	0.0	0.0	0.0	chr4	98929300	98929319	(91285236)	+	(T)n	Simple_repeat	1	20	(0)	2930946
1884	22.4	4.3	2.2	chr4	101953882	101954338	(88260217)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2935012
1867	17.6	4.2	9.9	chr4	102404577	102405012	(87809543)	C	MLT2D	LTR/ERVL	(4)	410	1	2935626
194	20.4	5.3	0.0	chr4	102868710	102868763	(87345792)	C	MIRc	SINE/MIR	(14)	254	198	2936282
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
8437	15.2	3.4	1.7	chr4	105435584	105437239	(84777316)	+	L1PA15-16	LINE/L1	4470	6145	(714)	2939461
218	37.7	2.5	2.5	chr4	105437263	105437420	(84777135)	C	L2	LINE/L2	(1908)	1511	1354	2939462
16145	12.0	3.3	5.5	chr4	107592297	107594460	(82620095)	+	Tigger4	DNA/TcMar-Tigger	2	2087	(644)	2942260
11	16.4	5.9	0.0	chr4	109560059	109560092	(80654463)	+	(GCTCTC)n	Simple_repeat	1	36	(0)	2945187
16	0.0	0.0	0.0	chr4	109560093	109560110	(80654445)	+	(T)n	Simple_repeat	1	18	(0)	2945188
27	19.9	3.5	3.4	chr4	110636976	110637061	(79577494)	+	(TCTC)n	Simple_repeat	1	89	(0)	2946880
1698	10.5	0.8	0.4	chr4	112011095	112011361	(78203194)	+	L1MA2	LINE/L1	6037	6304	(0)	2948552
16697	11.9	4.1	2.6	chr4	112011362	112012056	(78202499)	C	Tigger4	DNA/TcMar-Tigger	(1573)	1158	460	2948550
9027	15.8	7.7	2.1	chr4	114285338	114287033	(75927522)	+	Tigger4	DNA/TcMar-Tigger	1	1798	(933)	2951882
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
13	11.3	10.5	0.0	chr4	116978831	116978868	(73235687)	+	(CATGAAT)n	Simple_repeat	1	42	(0)	2955118
1520	21.1	2.0	2.3	chr4	116978948	116979251	(73235304)	+	AluJo	SINE/Alu	3	305	(7)	2955119
13970	16.6	4.5	1.9	chr4	117119515	117120686	(73093869)	+	Tigger4	DNA/TcMar-Tigger	1	1177	(1554)	2955307
1649	10.8	1.4	0.0	chr4	117120687	117120898	(73093657)	C	AluSz	SINE/Alu	(97)	215	1	2955308
21	3.6	0.0	0.0	chr4	123877044	123877072	(66337483)	+	(TTTTC)n	Simple_repeat	1	29	(0)	2964596
6359	25.2	5.4	2.8	chr4	124622558	124624246	(65590309)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	2965517
23	24.2	1.6	0.0	chr4	124712431	124712493	(65502062)	+	(CCG)n	Simple_repeat	1	64	(0)	2965644
29	0.0	0.0	0.0	chr4	124712784	124712810	(65501745)	+	(CCCCGC)n	Simple_repeat	1	27	(0)	2965645
14	4.1	0.0	6.9	chr4	125434617	125434645	(64779910)	+	(ATTTT)n	Simple_repeat	1	29	(0)	2966608
1063	30.3	9.6	2.0	chr4	125434646	125435096	(64779459)	C	MLT1H1	LTR/ERVL-MaLR	(65)	490	2	2966609
2782	28.8	13.7	4.3	chr4	125686315	125687009	(64527546)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	933	2966921
1688	21.3	5.6	1.9	chr4	125687010	125687425	(64527130)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2966922
6302	9.4	2.7	2.7	chr4	132628788	132630473	(57584082)	+	L1PA3	LINE/L1	4461	6154	(1)	2976065
3998	14.5	0.2	0.7	chr4	132630474	132631078	(57583477)	+	THE1D-int	LTR/ERVL-MaLR	846	1447	(133)	2976064
15785	14.0	3.2	1.8	chr4	140981192	140983739	(49230816)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	143	2987098
1650	20.5	8.8	0.8	chr4	143323920	143324283	(46890272)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2990149
1835	23.1	1.8	10.8	chr4	143324284	143324644	(46889911)	C	L1MEc	LINE/L1	(1072)	5247	4932	2990147
19	18.3	2.3	0.0	chr4	144646329	144646372	(45568183)	+	(TCC)n	Simple_repeat	1	45	(0)	2991880
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
13	4.3	0.0	7.1	chr4	147732031	147732058	(42482497)	+	(GGGGC)n	Simple_repeat	1	28	(0)	2996130
23	21.4	1.6	1.6	chr4	151409002	151409062	(38805493)	+	(GGC)n	Simple_repeat	1	62	(0)	3001452
1254	11.2	0.0	0.6	chr4	152228263	152228424	(37986131)	+	AluSx	SINE/Alu	2	162	(150)	3002667
49	26.2	1.4	0.7	chr4	152228431	152228570	(37985985)	+	(GCAT)n	Simple_repeat	1	142	(0)	3002668
1180	14.2	0.0	0.0	chr4	152228587	152228748	(37985807)	+	AluSx	SINE/Alu	139	300	(12)	3002667
673	31.8	19.4	2.6	chr4	154732693	154733600	(35480955)	+	L2b	LINE/L2	1850	2927	(492)	3006477
14	11.6	3.5	0.0	chr4	155675790	155675818	(34538737)	+	(CTTCT)n	Simple_repeat	1	30	(0)	3007768
188	32.2	14.4	4.0	chr4	155675911	155676059	(34538496)	+	MamTip2	DNA/hAT-Tip100	51	217	(88)	3007769
111	10.7	1.1	9.2	chr4	162763896	162764175	(27450380)	+	(TATA)n	Simple_repeat	1	283	(0)	3017144
12277	12.4	4.6	2.2	chr4	165647971	165649953	(24564602)	+	Tigger4	DNA/TcMar-Tigger	699	2731	(0)	3021400
13	21.2	2.1	4.2	chr4	167234067	167234113	(22980442)	+	(CCG)n	Simple_repeat	1	48	(0)	3023322
14	26.4	1.4	6.8	chr4	167234628	167234700	(22979855)	+	(CTC)n	Simple_repeat	1	74	(0)	3023323
219	33.8	2.7	0.0	chr4	170089444	170089514	(20125041)	+	L2b	LINE/L2	3290	3362	(25)	3027352
16	17.4	8.8	2.7	chr4	170089984	170090051	(20124504)	+	(GCCGC)n	Simple_repeat	1	74	(0)	3027354
693	30.2	0.6	0.6	chr4	171846176	171846355	(18368200)	+	Tigger17	DNA/TcMar-Tigger	2	181	(2492)	3029488
185	40.0	4.9	0.7	chr4	171846438	171846573	(18367982)	+	MIRb	SINE/MIR	5	146	(122)	3029489
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
14	23.7	6.6	4.1	chr4	173169215	173169305	(17045250)	+	(CGCGGC)n	Simple_repeat	1	97	(0)	3031239
1125	7.4	6.5	3.1	chr4	173369470	173369631	(16844924)	+	AluSx	SINE/Alu	129	296	(16)	3031513
19	20.3	2.4	0.0	chr4	174778020	174778060	(15436495)	+	(TA)n	Simple_repeat	1	42	(0)	3033410
22	23.4	1.0	7.1	chr4	176320228	176320324	(13894231)	+	(GGCCGG)n	Simple_repeat	1	98	(0)	3035383
15512	11.5	4.6	4.1	chr4	176351596	176354362	(13860193)	C	MER4-int	LTR/ERV1	(2)	6596	3815	3035423
10006	14.1	5.5	1.2	chr4	176845252	176846543	(13368012)	+	Tigger4	DNA/TcMar-Tigger	419	1764	(967)	3036078
1642	17.1	2.0	1.7	chr4	179750013	179750305	(10464250)	C	AluJo	SINE/Alu	(2)	310	17	3039900
23	23.3	1.7	0.0	chr4	183099190	183099258	(7115297)	+	GA-rich	Low_complexity	1	70	(0)	3044388
21	9.7	4.3	2.1	chr4	183099352	183099397	(7115158)	+	(CCGCGCC)n	Simple_repeat	1	48	(0)	3044389
17	20.0	7.0	0.0	chr4	183504710	183504766	(6709789)	+	(CGCAGG)n	Simple_repeat	1	61	(0)	3045073
13	21.8	6.5	3.0	chr4	183602882	183602943	(6611612)	+	(CAA)n	Simple_repeat	1	66	(0)	3045248
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
29	2.6	0.0	2.4	chr5	11838	11879	(181526380)	+	(GACCCC)n	Simple_repeat	1	42	(0)	3054966
7973	10.4	3.5	1.2	chr5	11943	13334	(181524925)	C	TAR1	Satellite/telo	(43)	2068	644	3054967
15762	14.4	1.7	1.0	chr5	8443599	8444920	(173093339)	+	Tigger4	DNA/TcMar-Tigger	103	1434	(1297)	3064338
13	13.1	2.7	5.3	chr5	10354533	10354569	(171183690)	+	(GTTTT)n	Simple_repeat	1	38	(0)	3066757
629	3.9	0.0	0.0	chr5	10357967	10358044	(171180215)	C	Alu	SINE/Alu	(11)	300	223	3066765
1042	24.9	7.0	16.8	chr5	10358045	10358386	(171179873)	C	L2a	LINE/L2	(0)	3172	2814	3066764
4089	20.1	5.9	1.9	chr5	13996309	13997120	(167541139)	C	MLT1A1-int	LTR/ERVL-MaLR	(2)	1733	887	3071588
3396	12.9	5.9	7.4	chr5	13997125	13997762	(167540497)	C	MLT1A1-int	LTR/ERVL-MaLR	(1107)	628	1	3071588
30	18.2	0.0	0.0	chr5	17217607	17217664	(164320595)	+	(GGC)n	Simple_repeat	1	58	(0)	3076467
16	20.9	2.9	5.7	chr5	17217831	17217898	(164320361)	+	(GCCCC)n	Simple_repeat	1	70	(0)	3076468
309	35.2	8.5	4.9	chr5	17465871	17466154	(164072105)	C	L1MEf	LINE/L1	(5597)	497	203	3076882
357	27.3	6.4	2.9	chr5	17466163	17466298	(164071961)	C	L1MEf	LINE/L1	(5924)	170	30	3076882
3450	15.2	3.9	0.8	chr5	21018955	21019557	(160518702)	+	LTR77	LTR/ERV1	1	622	(0)	3081403
13	19.6	2.9	0.0	chr5	25535938	25535972	(156002287)	+	(TTTA)n	Simple_repeat	1	36	(0)	3087444
876	21.3	0.0	0.0	chr5	25535973	25536122	(156002137)	C	FRAM	SINE/Alu	(26)	150	1	3087445
5414	25.8	7.7	5.5	chr5	26249886	26251581	(155286678)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	1	3088363
16	20.8	0.0	0.0	chr5	34193593	34193625	(147344634)	+	(T)n	Simple_repeat	1	33	(0)	3099488
209	36.0	16.7	2.5	chr5	38767360	38767641	(142770618)	+	MamRTE1	LINE/RTE-BovB	3414	3743	(69)	3106635
4608	9.8	5.4	5.9	chr5	40864387	40865439	(140672820)	+	MER11A	LTR/ERVK	1	1266	(0)	3109580
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
1914	11.7	0.3	7.1	chr5	50972702	50973009	(130565250)	C	AluSq	SINE/Alu	(25)	288	2	3117175
190	32.4	0.0	0.0	chr5	50973055	50973125	(130565134)	C	X7A_LINE	LINE/CR1	(66)	201	131	3117176
319	34.0	1.8	9.9	chr5	52244194	52244435	(129293824)	C	L1MC4	LINE/L1	(5526)	1470	1249	3118740
1332	19.0	0.9	0.0	chr5	52244440	52244665	(129293594)	C	AluJb	SINE/Alu	(0)	312	85	3118742
15785	15.9	2.1	2.0	chr5	52624133	52627129	(128911130)	C	L1PA15	LINE/L1	(0)	6785	3797	3119202
13	12.7	0.0	0.0	chr5	53352496	53352521	(128185738)	+	(TTTTC)n	Simple_repeat	1	26	(0)	3120135
321	33.7	3.4	3.8	chr5	53352851	53353088	(128185171)	+	UCON132b	DNA/hAT-Tip100	4	253	(52)	3120136
13	8.7	0.0	14.0	chr5	56909853	56909902	(124628357)	+	G-rich	Low_complexity	1	50	(0)	3125753
16	4.5	0.0	0.0	chr5	57499628	57499650	(124038609)	+	(AAAC)n	Simple_repeat	1	23	(0)	3126854
16325	11.7	2.1	2.1	chr5	61862055	61864725	(119673534)	C	Tigger4	DNA/TcMar-Tigger	(60)	2671	1	3132893
12	18.0	8.8	4.0	chr5	62306381	62306448	(119231811)	+	(CTCCGCC)n	Simple_repeat	1	74	(0)	3133536
828	29.4	15.3	1.3	chr5	62651565	62651950	(118886309)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	144	3134170
33	0.0	0.0	0.0	chr5	64691375	64691402	(116846857)	+	(GT)n	Simple_repeat	1	28	(0)	3136782
1976	16.4	0.0	0.0	chr5	67597053	67597381	(113940878)	+	L1PA16	LINE/L1	5838	6166	(0)	3141049
1028	26.4	9.8	7.1	chr5	68700488	68701385	(112836874)	C	L1ME3C	LINE/L1	(1954)	4192	3268	3142612
547	27.0	22.0	0.6	chr5	68701387	68701714	(112836545)	C	LTR79	LTR/ERVL	(34)	493	76	3142620
12	15.1	0.0	12.3	chr5	72106992	72107048	(109431211)	+	G-rich	Low_complexity	1	57	(0)	3148505
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
13	22.1	4.1	2.0	chr5	72209571	72209619	(109328640)	+	(TGTGC)n	Simple_repeat	1	51	(0)	3148633
17	20.3	0.0	0.0	chr5	72209837	72209860	(109328399)	+	A-rich	Low_complexity	1	24	(0)	3148634
1018	18.7	0.6	0.6	chr5	72209861	72210043	(109328216)	+	FRAM	SINE/Alu	1	176	(0)	3148635
4160	26.2	8.6	9.9	chr5	72782122	72783635	(108754624)	+	MSTC-int	LTR/ERVL-MaLR	243	1735	(0)	3149511
19	21.4	3.7	0.0	chr5	73120484	73120537	(108417722)	+	(CCTGC)n	Simple_repeat	1	56	(0)	3150026
14	10.4	3.0	2.9	chr5	73120704	73120736	(108417523)	+	(GCGCCG)n	Simple_repeat	1	34	(0)	3150027
2002	13.6	0.0	1.3	chr5	73373461	73373761	(108164498)	C	AluSx1	SINE/Alu	(14)	298	2	3150390
293	30.2	0.9	0.9	chr5	74442641	74442747	(107095512)	C	LTR16C	LTR/ERVL	(381)	108	2	3151976
37	0.0	0.0	0.0	chr5	74442841	74442872	(107095387)	+	(AC)n	Simple_repeat	1	32	(0)	3151977
940	13.6	0.8	0.0	chr5	75717826	75717957	(105820302)	+	AluJo	SINE/Alu	1	133	(179)	3153972
12	8.6	0.0	6.9	chr5	81852164	81852192	(99686067)	+	(AACA)n	Simple_repeat	1	29	(0)	3163718
32	0.0	0.0	0.0	chr5	81852213	81852242	(99686017)	+	(T)n	Simple_repeat	1	30	(0)	3163719
12	25.7	0.0	0.0	chr5	81852392	81852428	(99685831)	+	G-rich	Low_complexity	1	37	(0)	3163720
15080	15.2	2.1	3.3	chr5	86261406	86262542	(95275717)	+	Tigger4	DNA/TcMar-Tigger	74	1175	(1556)	3169555
2134	10.3	0.0	0.0	chr5	86262543	86262824	(95275435)	C	AluSc5	SINE/Alu	(0)	309	28	3169556
11610	17.8	6.5	3.9	chr5	86693219	86695074	(94843185)	C	Tigger4	DNA/TcMar-Tigger	(883)	1848	5	3170137
15	0.0	0.0	0.0	chr5	88883004	88883020	(92655239)	+	(AG)n	Simple_repeat	1	17	(0)	3172894
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
533	26.4	11.3	6.8	chr5	89187461	89187712	(92350547)	+	L2a	LINE/L2	3147	3411	(15)	3173251
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
10799	15.1	2.1	0.2	chr5	92051748	92053491	(89484768)	C	Tigger4	DNA/TcMar-Tigger	(950)	1781	5	3177050
2558	25.8	5.8	10.0	chr5	99939712	99940501	(81597758)	C	L1MD3	LINE/L1	(396)	7599	6571	3187088
225	27.2	4.6	0.0	chr5	101568443	101568545	(79969714)	C	L1MEc	LINE/L1	(4377)	2023	1916	3189050
13	20.8	7.8	3.6	chr5	102296361	102296437	(79241822)	+	(AGCCTCC)n	Simple_repeat	1	83	(0)	3189947
28	14.7	3.2	1.6	chr5	103258663	103258724	(78279535)	+	GA-rich	Low_complexity	1	64	(0)	3191197
750	26.8	0.5	0.9	chr5	103793604	103793818	(77744441)	+	MER65-int	LTR/ERV1	1908	2121	(2750)	3191928
394	33.6	0.0	4.2	chr5	103793978	103794120	(77744139)	+	LTR49-int	LTR/ERV1	1667	1803	(4384)	3191930
2058	17.7	1.9	0.0	chr5	106220722	106221073	(75317186)	+	MLT2D	LTR/ERVL	1	495	(61)	3194834
31	3.3	0.0	0.0	chr5	106221074	106221104	(75317155)	+	(TC)n	Simple_repeat	1	31	(0)	3194835
302	27.6	3.1	3.9	chr5	106221105	106221127	(75317132)	+	MLT2D	LTR/ERVL	496	516	(40)	3194834
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
4338	12.6	1.4	2.4	chr5	106535765	106535989	(75002270)	C	L1PA13	LINE/L1	(508)	5655	5437	3195260
242	37.1	0.8	0.8	chr5	107362251	107362367	(74175892)	+	MIRc	SINE/MIR	30	146	(122)	3196260
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
669	26.7	7.4	1.1	chr5	109519094	109519282	(72018977)	+	L1MC4a	LINE/L1	5940	6141	(1741)	3199106
28	15.6	4.2	4.7	chr5	111757232	111757305	(69780954)	+	G-rich	Low_complexity	1	73	(0)	3201825
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
18	27.9	0.0	2.9	chr5	111757614	111757681	(69780578)	+	(CGCACCC)n	Simple_repeat	1	68	(0)	3201827
1237	16.5	4.0	0.0	chr5	112226728	112226988	(69311271)	+	L1MB2	LINE/L1	5900	6171	(0)	3202471
184	20.9	11.3	7.5	chr5	112227075	112227167	(69311092)	+	MamRTE1	LINE/RTE-BovB	3402	3498	(314)	3202472
16621	9.8	1.7	0.4	chr5	112432424	112433727	(69104532)	C	Charlie3	DNA/hAT-Charlie	(1290)	1416	46	3202759
20	19.2	3.8	0.0	chr5	115544855	115544935	(65993324)	+	G-rich	Low_complexity	1	84	(0)	3206941
1750	14.4	6.0	4.7	chr5	115545130	115545471	(65992788)	C	THE1B	LTR/ERVL-MaLR	(0)	364	18	3206942
15	16.9	0.0	0.0	chr5	116574585	116574617	(64963642)	+	G-rich	Low_complexity	1	33	(0)	3208281
2562	17.0	4.6	1.9	chr5	118169649	118170181	(63368078)	C	L1MB3	LINE/L1	(2)	6181	5634	3210533
287	26.2	12.2	2.4	chr5	119268331	119268455	(62269804)	C	MIRb	SINE/MIR	(10)	258	120	3212076
23	32.2	1.0	1.9	chr5	119268626	119268728	(62269531)	+	(CCCGC)n	Simple_repeat	1	104	(0)	3212077
19	12.6	0.0	0.0	chr5	124746152	124746186	(56792073)	+	(ATACAC)n	Simple_repeat	1	35	(0)	3219046
14170	12.6	4.3	1.2	chr5	125095141	125097483	(56440776)	+	Tigger1	DNA/TcMar-Tigger	1	2418	(0)	3219612
24	0.0	0.0	0.0	chr5	126450653	126450678	(55087581)	+	(A)n	Simple_repeat	1	26	(0)	3221201
2933	16.9	1.1	0.4	chr5	126450682	126451198	(55087061)	+	MSTB-int	LTR/ERVL-MaLR	770	1290	(361)	3221202
504	26.4	1.4	0.0	chr5	126595497	126595640	(54942619)	C	MER5A1	DNA/hAT-Charlie	(0)	166	21	3221484
23455	6.7	0.7	0.4	chr5	127197143	127203292	(54334967)	+	L1PA6	LINE/L1	174	6326	(1)	3222530
349	27.8	2.0	4.0	chr5	131170343	131170443	(50367816)	+	MIRb	SINE/MIR	20	118	(150)	3227461
36024	12.3	3.3	1.0	chr5	132283296	132285518	(49252741)	C	LTR57-int	LTR/ERVL	(1434)	3909	1694	3229139
2411	5.2	0.0	0.3	chr5	134039323	134039627	(47498632)	C	AluY	SINE/Alu	(6)	305	2	3231812
457	23.8	1.9	8.5	chr5	134039628	134039668	(47498591)	C	MER5B	DNA/hAT-Charlie	(114)	64	25	3231811
23063	10.0	1.4	2.1	chr5	136496037	136498788	(45039471)	C	L1PB1	LINE/L1	(1654)	5208	2381	3235748
22	0.0	0.0	0.0	chr5	137499472	137499495	(44038764)	+	(T)n	Simple_repeat	1	24	(0)	3237044
4377	1.6	0.0	0.0	chr5	137499508	137500000	(44038259)	C	L1PA2	LINE/L1	(1)	6154	5662	3237045
20	17.5	5.4	1.7	chr5	137754199	137754254	(43784005)	+	GA-rich	Low_complexity	1	59	(0)	3237463
15	18.1	0.0	0.0	chr5	137754305	137754336	(43783923)	+	(GCC)n	Simple_repeat	1	32	(0)	3237464
15	0.0	5.3	0.0	chr5	139294474	139294492	(42243767)	+	(CG)n	Simple_repeat	1	20	(0)	3240506
12	12.4	8.6	0.0	chr5	140841468	140841502	(40696757)	+	(GCTGGA)n	Simple_repeat	1	38	(0)	3243294
247	17.4	6.8	4.2	chr5	141968852	141968923	(39569336)	+	MER5A	DNA/hAT-Charlie	27	100	(89)	3244973
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
458	30.6	11.9	0.6	chr5	145823812	145823982	(35714277)	C	MIRb	SINE/MIR	(2)	266	74	3251349
185	38.1	2.9	2.2	chr5	145824064	145824200	(35714059)	C	MIR3	SINE/MIR	(36)	172	35	3251350
12	17.0	8.3	1.9	chr5	145824288	145824335	(35713924)	+	(GCAGAAG)n	Simple_repeat	1	52	(0)	3251351
46	0.0	0.0	0.0	chr5	145824426	145824464	(35713795)	+	(GT)n	Simple_repeat	1	39	(0)	3251352
251	24.6	1.6	0.0	chr5	145824484	145824544	(35713715)	+	Charlie24	DNA/hAT-Charlie	2373	2434	(16)	3251353
2892	13.1	1.8	3.0	chr5	147202867	147203597	(34334662)	+	L1MA6	LINE/L1	5065	5788	(512)	3253874
4005	21.2	4.0	7.1	chr5	147203669	147204359	(34333900)	C	MSTD-int	LTR/ERVL-MaLR	(721)	1014	344	3253875
21	23.4	0.0	0.0	chr5	147782642	147782692	(33755567)	+	(CAG)n	Simple_repeat	1	51	(0)	3254832
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
4663	13.8	2.4	0.9	chr5	148163120	148163943	(33374316)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	12	3255480
1438	3.6	0.0	1.8	chr5	149729726	149729891	(31808368)	C	AluSx1	SINE/Alu	(149)	163	1	3258407
201	27.2	11.9	2.4	chr5	149729911	149729993	(31808266)	+	MIR3	SINE/MIR	109	200	(8)	3258408
12	22.6	0.0	2.6	chr5	149730149	149730186	(31808073)	+	(CCCCCG)n	Simple_repeat	1	38	(0)	3258409
22	20.1	4.2	2.7	chr5	149730222	149730293	(31807966)	+	(CCTC)n	Simple_repeat	1	75	(0)	3258410
249	23.1	0.0	1.5	chr5	150073160	150073225	(31465034)	C	MIR3	SINE/MIR	(79)	129	65	3259154
55	26.9	1.8	1.2	chr5	150137882	150138049	(31400210)	+	(AGACAG)n	Simple_repeat	1	171	(0)	3259283
29	18.4	3.2	5.1	chr5	150486179	150486273	(31051986)	+	G-rich	Low_complexity	1	98	(0)	3260073
24	27.4	3.6	2.6	chr5	150486521	150486630	(31051629)	+	(GCGG)n	Simple_repeat	1	114	(0)	3260074
390	32.8	2.1	3.2	chr5	150801424	150801612	(30736647)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	3260725
252	27.8	1.0	4.0	chr5	150801712	150801812	(30736447)	C	L3	LINE/CR1	(249)	3850	3753	3260726
189	34.2	16.0	1.9	chr5	151825861	151826015	(29712244)	C	L3	LINE/CR1	(73)	4026	3846	3262692
15	5.6	0.0	0.0	chr5	154971570	154971588	(26566671)	+	(A)n	Simple_repeat	1	19	(0)	3268403
438	22.1	8.1	0.0	chr5	154971602	154971714	(26566545)	+	LTR33C	LTR/ERVL	12	134	(495)	3268404
389	25.5	2.8	0.0	chr5	154971813	154971918	(26566341)	C	MLT1N2	LTR/ERVL-MaLR	(45)	517	409	3268405
13	21.7	7.5	0.0	chr5	157859249	157859301	(23678958)	+	(TGAGA)n	Simple_repeat	1	57	(0)	3273467
725	15.4	0.8	0.8	chr5	157859316	157859433	(23678826)	+	MER5A	DNA/hAT-Charlie	72	189	(0)	3273468
9877	18.5	0.9	0.6	chr5	159599617	159601261	(21936998)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	3276424
229	31.0	10.7	0.0	chr5	160509273	160509372	(21028887)	+	MIR3	SINE/MIR	33	144	(64)	3278299
1720	28.6	2.9	1.5	chr5	161041604	161042149	(20496110)	+	MLT1H1	LTR/ERVL-MaLR	1	554	(1)	3279121
16	15.4	4.4	2.1	chr5	169300641	169300685	(12237574)	+	(CGCCAG)n	Simple_repeat	1	47	(0)	3291587
184	30.4	0.0	0.0	chr5	170681614	170681669	(10856590)	+	MIR	SINE/MIR	201	256	(6)	3294101
249	23.9	2.7	2.7	chr5	172713573	172713645	(8824614)	C	MIR	SINE/MIR	(77)	185	113	3298030
13	23.8	1.5	7.2	chr5	172770604	172770671	(8767588)	+	(GCGCGCC)n	Simple_repeat	1	69	(0)	3298155
12	22.4	0.0	2.6	chr5	172771386	172771423	(8766836)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	3298156
2665	2.7	0.0	0.0	chr5	172958945	172959238	(8579021)	+	AluY	SINE/Alu	5	298	(13)	3298606
403	21.2	0.9	0.1	chr5	173284361	173285203	(8253056)	+	(CATC)n	Simple_repeat	1	851	(0)	3299341
22020	9.6	5.2	1.3	chr5	173978510	173982479	(7555780)	C	L1PB1	LINE/L1	(2686)	4176	3	3300646
360	34.3	11.9	5.2	chr5	175716768	175717242	(5821017)	+	LTR85a	LTR/Gypsy?	196	702	(0)	3303986
3648	11.9	4.5	1.9	chr5	176197190	176197754	(5340505)	C	LTR19B	LTR/ERV1	(0)	580	1	3304808
13	25.5	5.5	2.6	chr5	176543293	176543365	(4994894)	+	(GCGGC)n	Simple_repeat	1	77	(0)	3305496
17	3.8	0.0	6.5	chr5	176817932	176817962	(4720297)	+	(CCGC)n	Simple_repeat	1	31	(0)	3306050
12	10.1	9.4	0.0	chr5	176818103	176818134	(4720125)	+	(GCCCCT)n	Simple_repeat	1	35	(0)	3306051
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
3626	11.6	4.8	1.9	chr5	177941237	177941799	(3596460)	+	LTR19B	LTR/ERV1	1	580	(0)	3308268
210	11.6	0.0	0.6	chr5	177941824	177941864	(3596395)	C	MIRc	SINE/MIR	(125)	143	100	3308269
16	19.2	0.0	4.4	chr5	178153596	178153640	(3384619)	+	(CACC)n	Simple_repeat	1	45	(0)	3308661
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2356	19.5	4.8	3.3	chr5	178858901	178859711	(2678548)	C	L1MA9	LINE/L1	(534)	5778	4872	3309952
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
229	30.0	3.6	0.0	chr5	179167141	179167220	(2371039)	C	MIRc	SINE/MIR	(112)	156	74	3310440
274	29.6	3.4	0.0	chr5	179658386	179658500	(1879759)	C	LTR16E2	LTR/ERVL	(422)	146	28	3311284
483	30.9	11.7	0.0	chr5	179658611	179658791	(1879468)	C	L1MC	LINE/L1	(2230)	5652	5448	3311285
1795	9.8	6.1	0.4	chr5	179658803	179659093	(1879166)	C	AluSg	SINE/Alu	(0)	310	1	3311286
5035	21.8	3.9	2.0	chr5	180091179	180091643	(1446616)	C	L1M4b	LINE/L1	(5595)	1272	803	3312067
664	28.2	12.9	4.6	chr5	180253766	180253963	(1284296)	+	HAL1	LINE/L1	605	810	(1697)	3312309
1956	11.7	1.0	4.8	chr5	180262421	180262736	(1275523)	C	AluSz6	SINE/Alu	(8)	304	1	3312317
1750	25.8	18.6	2.3	chr5	180262737	180263703	(1274556)	+	L2a	LINE/L2	1926	3094	(332)	3312316
878	31.3	5.6	1.3	chr5	180440338	180440813	(1097446)	+	L1MC5a	LINE/L1	2049	2546	(231)	3312641
14	19.0	5.0	4.8	chr6	2634350	2634409	(168171570)	+	(CCCGCAG)n	Simple_repeat	1	63	(0)	3317715
15	27.1	4.5	0.0	chr6	3068925	3068990	(167736989)	+	G-rich	Low_complexity	1	69	(0)	3318348
28	17.7	0.0	3.2	chr6	3162495	3162557	(167643422)	+	(TCCC)n	Simple_repeat	1	63	(0)	3318495
13	14.6	0.0	3.1	chr6	3163053	3163084	(167642895)	+	(CGCGG)n	Simple_repeat	1	32	(0)	3318496
196	25.6	0.0	0.0	chr6	4018919	4018961	(166787018)	+	L2b	LINE/L2	3332	3374	(1)	3319820
16580	12.9	4.4	0.7	chr6	4337820	4340105	(166465874)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	374	3320292
5124	15.8	3.0	3.6	chr6	10259173	10259474	(160546505)	+	L1MC1	LINE/L1	6190	6489	(19)	3329197
16	12.9	2.8	2.7	chr6	10259479	10259514	(160546465)	+	(TAA)n	Simple_repeat	1	37	(0)	3329199
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
2288	11.4	1.0	0.0	chr6	12659822	12660128	(158145851)	+	AluSz	SINE/Alu	1	310	(2)	3333005
235	18.3	0.0	2.7	chr6	13444861	13444933	(157361046)	+	L1MA7	LINE/L1	6221	6291	(0)	3334263
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
13	19.4	4.9	0.0	chr6	14211240	14211280	(156594699)	+	(GCCTC)n	Simple_repeat	1	43	(0)	3335634
31	0.0	0.0	0.0	chr6	17102344	17102372	(153703607)	+	(AAAC)n	Simple_repeat	1	29	(0)	3340539
182	32.7	11.1	3.9	chr6	20118933	20119215	(150686764)	C	L2	LINE/L2	(832)	2587	2282	3345428
7422	8.7	22.6	0.2	chr6	20238883	20240103	(150565876)	+	LTR12C	LTR/ERV1	3	1578	(1)	3345668
2877	19.9	8.2	9.7	chr6	20240104	20240356	(150565623)	C	LTR1E	LTR/ERV1	(507)	297	2	3345667
834	19.5	5.1	8.4	chr6	20240367	20240441	(150565538)	+	L1MD2	LINE/L1	4792	4851	(1295)	3345665
22	0.0	0.0	0.0	chr6	21098535	21098558	(149707421)	+	(T)n	Simple_repeat	1	24	(0)	3347110
249	32.0	11.1	4.6	chr6	21098685	21098903	(149707076)	C	L2c	LINE/L2	(185)	3202	2968	3347111
702	21.9	4.1	0.0	chr6	21099031	21099194	(149706785)	+	MER5B	DNA/hAT-Charlie	5	175	(3)	3347112
1265	22.5	6.2	1.9	chr6	21099206	21099527	(149706452)	C	MER58B	DNA/hAT-Charlie	(0)	341	5	3347113
15167	14.6	3.9	3.2	chr6	22972693	22974281	(147831698)	+	Tigger4	DNA/TcMar-Tigger	1	1657	(1074)	3349970
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
1827	15.2	1.4	0.7	chr6	26021059	26021347	(144784632)	+	AluSx1	SINE/Alu	1	291	(21)	3354504
1553	16.2	1.0	5.4	chr6	26249689	26250003	(144555976)	C	AluSz	SINE/Alu	(11)	301	1	3354891
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
23969	6.0	0.4	0.5	chr6	27008402	27014570	(143791409)	+	L1PA6	LINE/L1	5	6154	(0)	3356152
1378	15.6	2.0	0.3	chr6	27014622	27014911	(143791068)	+	L1MA9	LINE/L1	1711	2005	(4648)	3356149
548	0.0	0.0	21.3	chr6	27020346	27020439	(143785540)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3356155
1354	19.2	3.9	0.6	chr6	27178168	27178461	(143627518)	+	LTR10B2	LTR/ERV1	201	500	(3)	3356434
1523	3.4	1.6	0.0	chr6	27178469	27178647	(143627332)	+	HERVIP10B3-int	LTR/ERV1	3	184	(7419)	3356434
1786	9.5	0.0	0.0	chr6	27178651	27178872	(143627107)	+	AluSx4	SINE/Alu	79	300	(10)	3356435
4462	24.9	9.0	3.2	chr6	27445750	27446862	(143359117)	+	MSTD-int	LTR/ERVL-MaLR	255	1385	(350)	3356904
16	0.0	0.0	0.0	chr6	27688596	27688612	(143117367)	+	(A)n	Simple_repeat	1	17	(0)	3357377
589	6.8	0.0	0.0	chr6	28747744	28747816	(142058163)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359146
2799	16.1	0.6	2.3	chr6	28747872	28748347	(142057632)	+	MER1A	DNA/hAT-Charlie	62	529	(0)	3359147
12	30.0	0.0	4.8	chr6	30720277	30720338	(140085641)	+	(CCCG)n	Simple_repeat	1	62	(0)	3362083
2430	8.0	0.6	0.3	chr6	30907508	30907819	(139898160)	C	AluSq2	SINE/Alu	(0)	313	1	3362482
17	22.9	5.9	0.0	chr6	30908441	30908491	(139897488)	+	GA-rich	Low_complexity	1	54	(0)	3362483
3205	27.1	8.0	5.4	chr6	31015538	31016619	(139789360)	C	HAL1	LINE/L1	(851)	1656	517	3362657
9241	10.7	9.0	5.8	chr6	31016620	31018142	(139787837)	+	LTR12C	LTR/ERV1	3	1579	(0)	3362660
3243	13.8	1.8	0.6	chr6	31057564	31058052	(139747927)	C	LTR42	LTR/ERVL	(0)	495	1	3362716
1163	22.4	10.1	0.9	chr6	31058256	31058580	(139747399)	+	Charlie13b	DNA/hAT-Charlie	155	512	(0)	3362717
912	28.1	0.8	0.8	chr6	31343558	31343812	(139462167)	+	MLT2D	LTR/ERVL	11	265	(149)	3363192
1310	24.5	0.6	5.7	chr6	31343814	31344163	(139461816)	+	MER21-int	LTR/ERVL	2341	2672	(1519)	3363193
817	25.8	6.4	0.8	chr6	31458771	31459020	(139346959)	+	MLT2D	LTR/ERVL	1	265	(149)	3363349
1523	20.9	0.6	6.0	chr6	31459022	31459372	(139346607)	+	MER21-int	LTR/ERVL	2341	2672	(1519)	3363350
886	11.3	2.1	0.0	chr6	31459373	31459514	(139346465)	+	MSTA	LTR/ERVL-MaLR	1	145	(283)	3363351
12	16.8	3.7	7.1	chr6	31806831	31806884	(138999095)	+	(AGCGCG)n	Simple_repeat	1	56	(0)	3363932
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
2346	8.3	1.0	1.3	chr6	31864064	31864375	(138941604)	C	AluSx1	SINE/Alu	(1)	311	1	3364053
6917	20.4	2.5	2.4	chr6	33122935	33123947	(137682032)	C	HUERS-P3-int	LTR/ERV1	(5651)	1767	750	3365864
1492	17.9	0.7	6.6	chr6	33123957	33124261	(137681718)	C	HUERS-P3-int	LTR/ERV1	(6876)	542	256	3365864
307	20.7	1.7	0.0	chr6	33124267	33124324	(137681655)	C	HUERS-P3-int	LTR/ERV1	(7322)	96	38	3365864
17	15.3	0.0	0.0	chr6	33276840	33276868	(137529111)	+	(T)n	Simple_repeat	1	29	(0)	3366123
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
5554	20.1	9.8	5.7	chr6	39068132	39069351	(131736628)	C	MLT1A1-int	LTR/ERVL-MaLR	(280)	1455	196	3377417
708	16.5	16.0	0.0	chr6	40817270	40817427	(129988552)	C	MER53	DNA/hAT	(1)	192	5	3380150
1062	16.0	9.5	4.8	chr6	40817609	40817858	(129988121)	C	MER33	DNA/hAT-Charlie	(27)	297	35	3380151
13	11.7	4.9	4.7	chr6	41443311	41443351	(129362628)	+	(CGCCGCCT)n	Simple_repeat	1	43	(0)	3381166
20	21.2	2.8	4.1	chr6	41443482	41443552	(129362427)	+	G-rich	Low_complexity	1	73	(0)	3381167
17	8.6	8.1	0.0	chr6	41941725	41941761	(128864218)	+	(GGCGCT)n	Simple_repeat	1	40	(0)	3382130
15	10.4	3.0	2.9	chr6	41941767	41941799	(128864180)	+	(CCCG)n	Simple_repeat	1	34	(0)	3382131
12	10.0	0.0	0.0	chr6	41942103	41942124	(128863855)	+	(TCAT)n	Simple_repeat	1	22	(0)	3382132
1934	26.5	8.5	0.9	chr6	43229621	43229933	(127576046)	+	L2a	LINE/L2	2402	2748	(671)	3384957
3840	16.4	4.8	2.9	chr6	43229934	43230576	(127575403)	C	LTR62	LTR/ERVL	(0)	709	42	3384958
2182	16.6	3.1	1.1	chr6	43412018	43412520	(127393459)	+	L1MB3	LINE/L1	5194	5703	(481)	3385304
278	15.3	4.8	3.8	chr6	43412522	43412604	(127393375)	+	MER52A	LTR/ERV1	1	86	(1669)	3385307
6530	19.2	6.9	4.6	chr6	43412605	43414113	(127391866)	+	MER52A	LTR/ERV1	211	1755	(0)	3385307
28	20.7	2.8	0.0	chr6	44073379	44073450	(126732529)	+	(GCCCGC)n	Simple_repeat	1	74	(0)	3386516
19	6.5	3.1	0.0	chr6	44073528	44073559	(126732420)	+	(GGGAGG)n	Simple_repeat	1	33	(0)	3386517
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
233	17.1	0.0	0.0	chr6	44313466	44313506	(126492473)	+	L2a	LINE/L2	3363	3403	(23)	3386941
448	23.3	8.7	2.5	chr6	44313505	44313623	(126492356)	C	L2a	LINE/L2	(0)	3426	3300	3386942
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
231	30.0	4.8	0.0	chr6	47497863	47497942	(123308037)	C	HAL1	LINE/L1	(590)	1917	1834	3391852
549	27.3	13.3	3.6	chr6	47498072	47498538	(123307441)	C	HAL1ME	LINE/L1	(637)	1828	1310	3391856
285	24.5	15.0	0.0	chr6	52577609	52577710	(118228269)	C	L2a	LINE/L2	(14)	3412	3293	3398746
11064	9.8	2.0	0.5	chr6	54984513	54986951	(115819028)	+	L1PA14	LINE/L1	3685	6159	(2)	3402366
1332	19.9	5.9	5.3	chr6	63387232	63387570	(107418409)	+	MER2	DNA/TcMar-Tigger	5	345	(0)	3410409
203	29.6	0.0	3.6	chr6	63387661	63387704	(107418275)	+	X6A_LINE	LINE/CR1	88	130	(950)	3410410
667	17.4	11.9	6.0	chr6	63387705	63387853	(107418126)	C	AluJb	SINE/Alu	(17)	295	137	3410411
203	29.6	0.0	3.6	chr6	63387854	63387864	(107418115)	+	X6A_LINE	LINE/CR1	131	141	(939)	3410410
1974	12.5	0.3	3.7	chr6	63387880	63388174	(107417805)	C	AluSx1	SINE/Alu	(26)	286	2	3410412
10117	22.4	6.5	2.2	chr6	65503000	65506286	(105299693)	C	L1MCa	LINE/L1	(2160)	6043	2606	3413175
982	33.3	4.4	11.3	chr6	66107695	66108442	(104697537)	C	L1MEf	LINE/L1	(5478)	1069	394	3413905
30	30.2	2.4	2.3	chr6	68635173	68635298	(102170681)	+	(GC)n	Simple_repeat	1	129	(0)	3416917
16	15.3	2.7	0.0	chr6	68635444	68635480	(102170499)	+	A-rich	Low_complexity	1	38	(0)	3416918
1738	18.6	5.2	0.9	chr6	69859851	69860197	(100945782)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	3	3418516
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
6245	6.2	0.4	0.4	chr6	72877045	72877850	(97928129)	C	L1PA8	LINE/L1	(0)	6172	5367	3422463
1935	6.5	5.0	0.8	chr6	75496556	75496802	(95309177)	C	AluYf1	SINE/Alu	(17)	294	37	3426286
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
314	23.9	20.5	0.5	chr6	76008075	76008265	(94797714)	C	MIRb	SINE/MIR	(26)	242	3	3427168
1446	24.7	5.6	3.1	chr6	76008698	76009185	(94796794)	C	L1ME1	LINE/L1	(1)	6178	5678	3427169
17	18.2	0.0	4.3	chr6	79077039	79077085	(91728894)	+	(CGAG)n	Simple_repeat	1	47	(0)	3430766
16	19.9	0.0	2.4	chr6	79234607	79234648	(91571331)	+	(GCTGCC)n	Simple_repeat	1	42	(0)	3430987
259	24.2	12.8	0.0	chr6	89638871	89638965	(81167014)	+	MIRb	SINE/MIR	124	232	(36)	3445116
262	10.4	0.0	2.0	chr6	89638992	89639040	(81166939)	+	Alu	SINE/Alu	1	48	(85)	3445117
1085	9.4	0.0	0.0	chr6	89639047	89639184	(81166795)	+	AluSx	SINE/Alu	154	291	(21)	3445118
225	28.6	8.4	3.0	chr6	90186551	90186651	(80619328)	C	Helitron2Na_Mam	RC?/Helitron?	(206)	118	12	3446010
675	28.0	5.5	2.6	chr6	90186699	90186929	(80619050)	C	MIRb	SINE/MIR	(11)	257	20	3446011
51	0.0	0.0	0.0	chr6	90477063	90477106	(80328873)	+	(AC)n	Simple_repeat	1	44	(0)	3446456
12294	13.9	2.8	2.4	chr6	92000001	92001477	(78804502)	+	Tigger4	DNA/TcMar-Tigger	620	2096	(635)	3448388
6551	23.8	6.3	2.7	chr6	92769168	92770837	(78035142)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	3449286
458	28.0	10.1	1.1	chr6	93576334	93576521	(77229458)	+	MIRc	SINE/MIR	11	217	(51)	3450260
266	31.2	5.1	1.1	chr6	94743707	94743800	(76062179)	C	MIRb	SINE/MIR	(36)	232	135	3451694
4883	11.7	3.2	3.5	chr6	97978783	97979621	(72826358)	+	LTR1A2	LTR/ERV1	1	837	(0)	3455725
935	28.7	11.2	3.8	chr6	99300534	99300953	(71505026)	+	L4_C_Mam	LINE/RTE-X	2411	2865	(2273)	3457390
827	29.4	13.5	9.0	chr6	99300976	99301405	(71504574)	+	L4_C_Mam	LINE/RTE-X	2971	3427	(1711)	3457390
211	27.1	0.0	0.0	chr6	99588505	99588552	(71217427)	+	L2a	LINE/L2	3377	3424	(2)	3457915
247	24.2	1.6	1.6	chr6	99588556	99588618	(71217361)	C	L2a	LINE/L2	(16)	3410	3348	3457916
656	33.6	9.7	5.1	chr6	106254009	106254478	(64551501)	+	L2a	LINE/L2	2923	3416	(10)	3466619
279	32.3	3.9	2.9	chr6	107113586	107113687	(63692292)	C	L2a	LINE/L2	(1)	3425	3323	3468216
19	28.9	2.3	2.2	chr6	107489989	107490075	(63315904)	+	(CCTCC)n	Simple_repeat	1	89	(0)	3468954
60	18.2	1.6	0.8	chr6	107490249	107490375	(63315604)	+	(GCG)n	Simple_repeat	1	129	(0)	3468955
16	0.0	0.0	0.0	chr6	107807062	107807078	(62998901)	+	(T)n	Simple_repeat	1	17	(0)	3469410
14	19.5	0.0	2.7	chr6	109441043	109441079	(61364900)	+	(CGC)n	Simple_repeat	1	37	(0)	3472169
14212	12.6	5.7	1.7	chr6	109580850	109583169	(61222810)	+	Tigger1	DNA/TcMar-Tigger	1	2418	(0)	3472380
4122	15.9	6.3	3.4	chr6	110784183	110785073	(60020906)	+	L1MB7	LINE/L1	5194	6119	(65)	3474294
18	0.0	0.0	0.0	chr6	110785075	110785094	(60020885)	+	(A)n	Simple_repeat	1	20	(0)	3474296
14887	13.6	2.7	3.5	chr6	110785264	110785698	(60020281)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2277	3474297
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
848	14.7	0.0	1.0	chr6	112879636	112879828	(57926151)	C	MER52C	LTR/ERV1	(0)	1278	1111	3477688
3287	15.7	3.0	2.8	chr6	112879826	112880495	(57925484)	C	MER52C	LTR/ERV1	(607)	671	1	3477688
15535	15.2	2.3	0.9	chr6	112893530	112895868	(57910111)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	355	3477704
185	27.5	9.7	2.9	chr6	113361479	113361583	(57444396)	C	L3	LINE/CR1	(247)	3852	3740	3478345
20	8.0	0.0	0.0	chr6	113361637	113361663	(57444316)	+	(TG)n	Simple_repeat	1	27	(0)	3478346
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
300	27.4	13.3	5.0	chr6	113971785	113972009	(56833970)	C	MIRb	SINE/MIR	(8)	260	5	3479424
10355	6.8	0.5	0.1	chr6	116812642	116814767	(53991212)	+	L1PA6	LINE/L1	4024	6154	(0)	3483132
3687	18.8	1.6	1.3	chr6	116814769	116815200	(53990779)	+	L1MA4A	LINE/L1	2878	3308	(3537)	3483131
21	4.0	0.0	0.0	chr6	117265268	117265293	(53540686)	+	(TC)n	Simple_repeat	1	26	(0)	3483668
16	20.0	4.3	0.0	chr6	117265452	117265497	(53540482)	+	(CCCCCG)n	Simple_repeat	1	48	(0)	3483669
805	27.1	3.6	5.9	chr6	117388469	117388513	(53417466)	C	MIR	SINE/MIR	(0)	262	229	3483816
1137	18.4	3.1	3.1	chr6	117388514	117388737	(53417242)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	3483817
805	23.5	8.1	6.1	chr6	117388738	117388963	(53417016)	C	MIR	SINE/MIR	(34)	228	2	3483816
13688	11.4	6.5	3.1	chr6	118603120	118605731	(52200248)	C	MER41-int	LTR/ERV1	(799)	5147	2125	3485384
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2327	25.6	5.4	4.5	chr6	119866331	119867050	(50938929)	+	L1M4a1	LINE/L1	901	1620	(959)	3487125
2136	10.2	0.0	0.3	chr6	121532566	121532850	(49273129)	+	AluSx1	SINE/Alu	24	307	(5)	3489176
6079	14.9	2.1	0.3	chr6	121639425	121640397	(49165582)	C	Tigger4	DNA/TcMar-Tigger	(760)	1971	981	3489365
1807	19.6	0.0	0.7	chr6	121640543	121640843	(49165136)	C	AluJb	SINE/Alu	(13)	299	1	3489368
6838	24.8	3.0	4.7	chr6	124650776	124652534	(46153445)	C	MSTD-int	LTR/ERVL-MaLR	(4)	1731	2	3493271
22	14.6	2.0	4.0	chr6	124823367	124823415	(45982564)	+	(AC)n	Simple_repeat	1	50	(0)	3493449
29	0.0	0.0	0.0	chr6	125301483	125301507	(45504472)	+	(CA)n	Simple_repeat	1	25	(0)	3494127
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
1374	34.4	7.8	4.0	chr6	125511686	125511862	(45294117)	+	ERV3-16A3_I-int	LTR/ERVL	2047	2395	(3259)	3494434
1668	23.2	8.1	3.3	chr6	125512003	125512425	(45293554)	+	LTR16A1	LTR/ERVL	12	456	(0)	3494436
13656	18.7	6.3	1.3	chr6	126357907	126361291	(44444688)	C	L1P4a	LINE/L1	(1684)	4799	1120	3495571
12695	15.1	3.8	1.7	chr6	127057553	127059466	(43746513)	C	Tigger4	DNA/TcMar-Tigger	(763)	1968	7	3496357
2197	11.3	0.7	0.0	chr6	127592409	127592690	(43213289)	+	AluSz	SINE/Alu	1	284	(28)	3497096
26	0.0	0.0	0.0	chr6	127592691	127592715	(43213264)	+	(AAAC)n	Simple_repeat	1	25	(0)	3497097
309	33.4	0.4	1.7	chr6	127592718	127592851	(43213128)	+	MIRb	SINE/MIR	57	197	(71)	3497098
1416	16.3	5.9	0.6	chr6	127592874	127593152	(43212827)	C	MER61B	LTR/ERV1	(29)	398	22	3497099
555	16.7	1.9	1.9	chr6	127593137	127593240	(43212739)	C	MER61B	LTR/ERV1	(323)	104	1	3497099
273	12.2	0.0	0.0	chr6	127593249	127593289	(43212690)	C	MER61-int	LTR/ERV1	(22)	5195	5155	3497099
27325	2.6	0.2	0.0	chr6	127593293	127599292	(43206687)	+	L1PA2	LINE/L1	136	6145	(10)	3497100
23	13.7	2.5	0.0	chr6	128302943	128302982	(42502997)	+	(AC)n	Simple_repeat	1	41	(0)	3497962
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
18	24.2	3.3	5.3	chr6	131135644	131135734	(39670245)	+	(CCGCCT)n	Simple_repeat	1	94	(0)	3501898
14576	13.1	2.8	1.4	chr6	131689093	131690626	(39115353)	+	Tigger1	DNA/TcMar-Tigger	853	2418	(0)	3502732
14	17.6	2.5	2.4	chr6	131950864	131950903	(38855076)	+	(GCCGCA)n	Simple_repeat	1	41	(0)	3503156
13	16.8	0.0	5.4	chr6	131950933	131950969	(38855010)	+	(GCCCG)n	Simple_repeat	1	37	(0)	3503157
21	13.5	0.0	0.0	chr6	132104394	132104426	(38701553)	+	(A)n	Simple_repeat	1	33	(0)	3503400
1014	16.4	19.4	2.5	chr6	132104656	132104937	(38701042)	C	ORSL-2a	DNA/hAT-Tip100	(1)	341	1	3503401
12	20.7	0.0	2.9	chr6	132401389	132401423	(38404556)	+	(AGC)n	Simple_repeat	1	35	(0)	3503794
12	15.3	6.4	4.0	chr6	132401470	132401516	(38404463)	+	G-rich	Low_complexity	1	50	(0)	3503795
26	6.1	0.0	0.0	chr6	132401606	132401639	(38404340)	+	(CGTCC)n	Simple_repeat	1	34	(0)	3503796
20	22.9	1.4	5.3	chr6	132401772	132401845	(38404134)	+	GA-rich	Low_complexity	1	75	(0)	3503797
31	0.0	0.0	0.0	chr6	132589743	132589776	(38216203)	+	(A)n	Simple_repeat	1	34	(0)	3504017
5003	24.8	13.1	3.1	chr6	133232845	133233802	(37572177)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	613	3504968
2260	12.8	0.0	0.0	chr6	133233803	133234108	(37571871)	C	AluSx1	SINE/Alu	(6)	306	1	3504969
1009	15.9	0.0	0.0	chr6	133817726	133817876	(36988103)	+	AluJb	SINE/Alu	147	297	(15)	3505742
16	15.8	0.0	2.7	chr6	137161881	137161917	(33644062)	+	(ATTTT)n	Simple_repeat	1	37	(0)	3511071
26	21.3	0.0	2.9	chr6	138692906	138692974	(32113005)	+	G-rich	Low_complexity	1	69	(0)	3513358
15	4.7	0.0	0.0	chr6	138693080	138693101	(32112878)	+	(GGC)n	Simple_repeat	1	22	(0)	3513359
12	19.4	0.0	5.1	chr6	138693300	138693338	(32112641)	+	(CCGCGC)n	Simple_repeat	1	39	(0)	3513360
13	20.7	4.3	2.1	chr6	138693515	138693560	(32112419)	+	(GCTCC)n	Simple_repeat	1	48	(0)	3513361
38	15.6	4.1	2.9	chr6	138987868	138987965	(31818014)	+	(CGGCTG)n	Simple_repeat	1	102	(0)	3513898
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
17	7.0	0.0	5.9	chr6	142146996	142147029	(28658950)	+	(AACAA)n	Simple_repeat	1	34	(0)	3518107
490	28.6	7.5	0.0	chr6	142712167	142712313	(28093666)	C	MIR3	SINE/MIR	(41)	167	9	3518873
14	8.5	0.0	3.7	chr6	142946113	142946139	(27859840)	+	(GAGG)n	Simple_repeat	1	27	(0)	3519179
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
224	27.8	4.2	13.4	chr6	143687887	143688050	(27117929)	C	L2c	LINE/L2	(5)	3382	3200	3520272
1594	30.6	10.8	1.6	chr6	143688399	143689395	(27116584)	+	L2a	LINE/L2	2339	3426	(0)	3520273
17773	11.6	4.2	4.0	chr6	144167916	144169663	(26636316)	C	Tigger4	DNA/TcMar-Tigger	(348)	2383	651	3520973
4552	8.2	1.1	2.1	chr6	145097820	145098849	(25707130)	C	MER11A	LTR/ERVK	(0)	1266	1	3522307
12	21.6	0.0	0.0	chr6	146543341	146543372	(24262607)	+	(GGCCCC)n	Simple_repeat	1	32	(0)	3524168
15	20.7	0.0	7.0	chr6	146543641	146543697	(24262282)	+	(CCGGC)n	Simple_repeat	1	57	(0)	3524169
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
1427	13.7	6.1	9.2	chr6	150081803	150082073	(20723906)	C	AluSz	SINE/Alu	(10)	302	41	3529635
15	18.4	0.0	7.8	chr6	150143197	150143247	(20662732)	+	(CGG)n	Simple_repeat	1	51	(0)	3529746
14	28.5	2.0	0.0	chr6	150143349	150143399	(20662580)	+	(GCA)n	Simple_repeat	1	52	(0)	3529747
182	32.0	9.3	9.8	chr6	150312912	150312991	(20492988)	C	L2c	LINE/L2	(1141)	2278	2195	3530014
12	15.5	3.5	0.0	chr6	150313431	150313459	(20492520)	+	(CCTGG)n	Simple_repeat	1	30	(0)	3530020
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
17	12.4	2.9	0.0	chr6	151390334	151390368	(19415611)	+	(TCCCCG)n	Simple_repeat	1	36	(0)	3531907
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
878	25.2	4.3	2.2	chr6	152253341	152253567	(18552412)	C	MIR	SINE/MIR	(0)	262	31	3533260
46	0.0	0.0	0.0	chr6	152253819	152253860	(18552119)	+	(T)n	Simple_repeat	1	42	(0)	3533261
20182	10.4	1.9	3.2	chr6	153064642	153066760	(17739219)	+	L1MA2	LINE/L1	3254	5317	(2248)	3534393
2225	15.6	0.0	0.7	chr6	154630520	154630827	(16175152)	C	AluJb	SINE/Alu	(6)	306	1	3536737
2393	11.9	0.3	0.3	chr6	154630979	154631288	(16174691)	C	AluSq2	SINE/Alu	(3)	310	1	3536738
7876	12.6	2.4	0.2	chr6	155702029	155703362	(15102617)	C	L1PA16	LINE/L1	(1719)	4427	3065	3538473
5003	23.8	4.7	4.0	chr6	156135445	156136159	(14669820)	C	L1ME1	LINE/L1	(771)	5799	5034	3539044
595	23.9	0.0	0.0	chr6	156136160	156136293	(14669686)	C	L1PA17	LINE/L1	(15)	6151	6018	3539048
5003	24.1	5.7	3.3	chr6	156136294	156137057	(14668922)	C	L1ME1	LINE/L1	(1504)	5033	4282	3539044
4192	22.1	10.6	4.4	chr6	157957634	157957885	(12848094)	C	L1MEc	LINE/L1	(4468)	1932	1596	3541726
1914	14.4	3.2	2.3	chr6	157957886	157958191	(12847788)	C	AluJr	SINE/Alu	(3)	309	1	3541728
4192	22.1	10.6	4.4	chr6	157958192	157958315	(12847664)	C	L1MEc	LINE/L1	(4805)	1595	1476	3541726
2409	9.7	0.0	0.0	chr6	157958316	157958613	(12847366)	C	AluY	SINE/Alu	(13)	298	1	3541729
2482	13.1	2.4	0.8	chr6	160520332	160520822	(10285157)	C	LTR12E	LTR/ERV1	(823)	499	1	3545512
2037	19.8	3.2	1.9	chr6	163142771	163143233	(7662746)	+	L1MD3	LINE/L1	7527	7995	(0)	3549081
231	23.1	0.9	4.0	chr6	163143258	163143332	(7662647)	+	L1M5	LINE/L1	3926	4000	(2146)	3549080
195	22.7	2.2	0.0	chr6	163143380	163143423	(7662556)	+	MIRc	SINE/MIR	170	214	(54)	3549082
328	30.6	2.7	0.0	chr6	163143503	163143610	(7662369)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	395	3549083
249	21.7	2.8	1.4	chr6	164107841	164107910	(6698069)	+	LFSINE_Vert	SINE/tRNA	114	184	(275)	3550335
183	29.6	6.6	0.0	chr6	165272839	165272909	(5533070)	+	L2c	LINE/L2	3250	3325	(62)	3551760
41	10.0	1.3	2.5	chr6	165272937	165273015	(5532964)	+	(CT)n	Simple_repeat	1	80	(0)	3551761
12	20.6	2.9	0.0	chr6	165847706	165847739	(4958240)	+	(TTTG)n	Simple_repeat	1	35	(0)	3552455
15	22.5	1.8	3.6	chr6	166956925	166956979	(3849000)	+	(CACCCCG)n	Simple_repeat	1	56	(0)	3553813
15	20.1	3.6	3.5	chr6	166999124	166999178	(3806801)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3553893
59	36.6	0.5	0.5	chr6	168895453	168895665	(1910314)	+	(TG)n	Simple_repeat	1	214	(0)	3555923
19	0.0	0.0	0.0	chr6	169213338	169213358	(1592621)	+	(A)n	Simple_repeat	1	21	(0)	3556247
3314	26.1	9.8	5.1	chr6	169414407	169415964	(1390015)	+	L1ME3	LINE/L1	433	2071	(4171)	3556428
12	19.0	7.1	0.0	chr6	170137036	170137077	(668902)	+	(GAGCCG)n	Simple_repeat	1	45	(0)	3557180
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
12	26.6	0.0	2.3	chr7	519254	519296	(158826677)	+	G-rich	Low_complexity	1	43	(0)	3558444
52	26.9	3.8	5.0	chr7	519432	519719	(158826254)	+	(CCGCCGC)n	Simple_repeat	1	299	(0)	3558445
14	11.7	3.6	0.0	chr7	519776	519803	(158826170)	+	GA-rich	Low_complexity	1	29	(0)	3558446
31	7.8	3.6	1.7	chr7	519881	519936	(158826037)	+	(CCGCCC)n	Simple_repeat	1	58	(0)	3558447
1738	17.9	3.2	0.7	chr7	846731	847032	(158498941)	+	AluJo	SINE/Alu	2	311	(1)	3558994
1904	21.7	1.8	0.0	chr7	1648625	1649007	(157696966)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3560248
30	0.0	3.1	0.0	chr7	3301144	3301175	(156044798)	+	(CGGCGGG)n	Simple_repeat	1	33	(0)	3563107
18	27.8	2.1	5.2	chr7	3301201	3301295	(156044678)	+	(GCG)n	Simple_repeat	1	97	(0)	3563108
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
989	27.9	9.4	14.3	chr7	4083893	4084657	(155261316)	C	L1MC5a	LINE/L1	(691)	2086	1328	3564223
1384	21.9	5.8	5.6	chr7	4294145	4294521	(155051452)	+	MSTD	LTR/ERVL-MaLR	19	396	(0)	3564524
277	26.5	0.0	0.0	chr7	4973646	4973713	(154372260)	+	L2a	LINE/L2	3359	3426	(0)	3565960
14	14.2	0.0	8.7	chr7	4974648	4974693	(154371280)	+	G-rich	Low_complexity	1	46	(0)	3565961
16	25.8	1.3	5.2	chr7	5781370	5781445	(153564528)	+	(CCCTCGG)n	Simple_repeat	1	77	(0)	3567791
380	19.4	4.3	0.0	chr7	6091816	6091882	(153254091)	C	FLAM_A	SINE/Alu	(69)	73	4	3568589
233	22.5	8.5	6.6	chr7	6348316	6348418	(152997555)	+	MIRc	SINE/MIR	57	169	(99)	3569141
13	7.6	8.5	5.9	chr7	6348517	6348563	(152997410)	+	G-rich	Low_complexity	1	51	(0)	3569142
12	18.4	5.4	0.0	chr7	6348780	6348816	(152997157)	+	(GCCGC)n	Simple_repeat	1	39	(0)	3569143
382	12.9	1.6	1.6	chr7	6681051	6681113	(152664860)	+	MER2B	DNA/TcMar-Tigger	274	336	(0)	3569934
18	25.9	0.0	3.2	chr7	6826157	6826219	(152519754)	+	(GCCCCG)n	Simple_repeat	1	63	(0)	3570254
1788	15.2	3.6	0.3	chr7	6826471	6826765	(152519208)	C	AluJb	SINE/Alu	(7)	305	1	3570255
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
324	24.5	3.8	0.0	chr7	10636507	10636608	(148709365)	+	MLT1L	LTR/ERVL-MaLR	503	608	(2)	3575159
14	15.4	5.6	0.0	chr7	12686828	12686863	(146659110)	+	(GGCG)n	Simple_repeat	1	38	(0)	3577694
14	14.1	7.7	0.0	chr7	16421279	16421317	(142924656)	+	(CCCGG)n	Simple_repeat	1	42	(0)	3582435
14	18.3	3.6	5.3	chr7	16753584	16753638	(142592335)	+	(CCCTCGC)n	Simple_repeat	1	57	(0)	3582984
14	13.0	5.9	0.0	chr7	16753728	16753761	(142592212)	+	G-rich	Low_complexity	1	36	(0)	3582985
11	18.1	2.4	4.8	chr7	16753799	16753839	(142592134)	+	(CGCCGCG)n	Simple_repeat	1	42	(0)	3582986
1947	12.4	6.8	2.8	chr7	17902739	17903062	(141442911)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	3584498
15	16.6	2.3	4.4	chr7	23470377	23470420	(135875553)	+	GA-rich	Low_complexity	1	45	(0)	3592400
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
13	24.9	4.6	2.9	chr7	23474085	23474149	(135871824)	+	(GCCGC)n	Simple_repeat	1	68	(0)	3592403
1806	12.7	5.9	4.0	chr7	23532310	23532464	(135813509)	C	AluJb	SINE/Alu	(6)	306	143	3592524
2262	10.4	0.0	0.3	chr7	23532465	23532761	(135813212)	C	AluSx	SINE/Alu	(16)	296	1	3592525
1520	13.9	4.1	0.1	chr7	25037214	25037609	(134308364)	C	LTR45B	LTR/ERV1	(0)	500	3	3594794
560	18.1	10.6	2.6	chr7	25624455	25624650	(133721323)	+	Charlie7a	DNA/hAT-Charlie	56	246	(26)	3595707
182	30.5	13.2	1.9	chr7	25624779	25624885	(133721088)	C	MIR3	SINE/MIR	(26)	182	62	3595708
190	30.5	0.0	3.3	chr7	25624992	25625052	(133720921)	+	MER5A	DNA/hAT-Charlie	127	185	(4)	3595709
737	27.0	13.3	4.9	chr7	25625136	25625560	(133720413)	C	Tigger15a	DNA/TcMar-Tigger	(241)	474	9	3595710
578	21.9	8.8	7.0	chr7	26061944	26062079	(133283894)	C	L2a	LINE/L2	(0)	3426	3277	3596345
2159	11.3	1.6	1.0	chr7	26062080	26062380	(133283593)	+	AluSx3	SINE/Alu	1	303	(8)	3596346
16	4.0	0.0	6.7	chr7	26291981	26292010	(133053963)	+	(CGC)n	Simple_repeat	1	30	(0)	3596789
13	22.8	0.0	0.0	chr7	26292040	26292075	(133053898)	+	(GCCCG)n	Simple_repeat	1	36	(0)	3596790
243	26.9	8.5	13.1	chr7	28272805	28272941	(131073032)	C	L3	LINE/CR1	(9)	4090	3961	3599803
19	0.0	0.0	0.0	chr7	28435382	28435402	(130910571)	+	(T)n	Simple_repeat	1	21	(0)	3600063
29	0.0	0.0	0.0	chr7	28904327	28904354	(130441619)	+	(TTTGT)n	Simple_repeat	1	28	(0)	3600741
496	32.4	6.8	4.7	chr7	29145633	29145846	(130200127)	C	MIRb	SINE/MIR	(37)	231	13	3601121
13	16.3	7.3	0.0	chr7	29194245	29194315	(130151658)	+	(CCGCGC)n	Simple_repeat	1	76	(0)	3601207
12	12.7	8.5	3.9	chr7	30284482	30284528	(129061445)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	3602921
942	16.9	0.6	0.6	chr7	30478205	30478371	(128867602)	C	MER5B	DNA/hAT-Charlie	(11)	167	1	3603186
43	25.8	1.5	6.8	chr7	32891819	32892022	(126453951)	+	(CCGC)n	Simple_repeat	1	207	(0)	3606930
15	23.3	0.0	0.0	chr7	32957415	32957454	(126388519)	+	(GCGG)n	Simple_repeat	1	40	(0)	3607084
14	22.9	0.0	6.9	chr7	32957516	32957573	(126388400)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3607085
17	26.0	0.0	5.6	chr7	35037448	35037518	(124308455)	+	(GGCG)n	Simple_repeat	1	71	(0)	3610093
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
17	33.0	0.0	3.6	chr7	35801781	35801864	(123544109)	+	(GGC)n	Simple_repeat	1	84	(0)	3611240
520	26.3	2.3	4.9	chr7	36128311	36128501	(123217472)	+	MIRb	SINE/MIR	66	259	(9)	3611785
2882	22.9	4.8	13.1	chr7	38522734	38522828	(120823145)	+	L1MC4	LINE/L1	6460	6552	(1490)	3615240
2382	8.4	0.3	0.3	chr7	38522829	38523125	(120822848)	+	AluSq4	SINE/Alu	2	298	(13)	3615241
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
1914	16.1	1.3	0.7	chr7	39959461	39959764	(119386209)	C	AluSz	SINE/Alu	(6)	306	1	3617506
17	5.0	0.0	0.0	chr7	39960070	39960090	(119385883)	+	(T)n	Simple_repeat	1	21	(0)	3617507
490	21.8	11.8	1.4	chr7	41968199	41968342	(117377631)	+	MIR	SINE/MIR	30	190	(72)	3620600
12	29.2	0.0	3.7	chr7	42911707	42911760	(116434213)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3621832
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
192	24.6	9.5	1.7	chr7	43582513	43582570	(115763403)	+	MIR	SINE/MIR	149	211	(51)	3622831
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
360	29.9	2.4	4.7	chr7	43764809	43764980	(115580993)	C	MIR3	SINE/MIR	(18)	190	23	3623143
377	27.9	20.7	0.9	chr7	50032566	50032782	(109313191)	+	MER68	LTR/ERVL	1	271	(292)	3631890
6428	18.9	7.5	6.3	chr7	50032847	50033678	(109312295)	+	LTR49-int	LTR/ERV1	4574	5452	(879)	3631891
1904	27.9	8.1	2.3	chr7	54910139	54911118	(104434855)	+	L1M3c	LINE/L1	9	1100	(5041)	3637969
43	0.0	0.0	0.0	chr7	55887601	55887639	(103458334)	+	(GCG)n	Simple_repeat	1	39	(0)	3639433
112	8.2	5.8	4.3	chr7	55887695	55887934	(103458039)	+	(GGC)n	Simple_repeat	1	254	(0)	3639434
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1891	16.9	0.7	0.0	chr7	67353821	67354115	(91991858)	C	AluJr	SINE/Alu	(15)	297	1	3652021
2267	11.5	0.0	0.0	chr7	67354136	67354439	(91991534)	C	AluSx1	SINE/Alu	(8)	304	1	3652022
2087	11.7	0.3	5.2	chr7	69412106	69412430	(89933543)	+	AluJr	SINE/Alu	2	310	(2)	3656615
722	23.7	5.8	7.0	chr7	69412431	69412538	(89933435)	C	MIR	SINE/MIR	(164)	98	1	3656614
1068	22.3	22.2	3.2	chr7	69412576	69413048	(89932925)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	3	3656616
20	21.6	4.1	2.6	chr7	69598023	69598095	(89747878)	+	(CCGCCC)n	Simple_repeat	1	76	(0)	3657060
31	2.2	4.0	3.9	chr7	69598310	69598359	(89747614)	+	(CGAG)n	Simple_repeat	1	52	(0)	3657061
279	31.8	20.8	5.0	chr7	69896774	69897134	(89448839)	+	L2a	LINE/L2	2993	3425	(1)	3657542
1406	17.6	5.9	0.4	chr7	69897275	69897548	(89448425)	C	MLT1A0	LTR/ERVL-MaLR	(4)	361	72	3657543
1044	28.6	8.0	4.1	chr7	69998583	69999001	(89346972)	C	L2a	LINE/L2	(5)	3421	2985	3657688
16	24.9	1.8	1.8	chr7	70596143	70596197	(88749776)	+	(GCGCG)n	Simple_repeat	1	56	(0)	3658541
189	30.8	7.1	0.0	chr7	73683366	73683430	(85662543)	+	MamRTE1	LINE/RTE-BovB	857	926	(2886)	3665233
1814	11.2	7.0	0.0	chr7	74172990	74173266	(85172707)	+	AluSg	SINE/Alu	2	299	(11)	3666406
1483	18.2	0.0	5.5	chr7	74173267	74173447	(85172526)	+	AluJr	SINE/Alu	138	312	(0)	3666405
235	31.1	13.9	3.6	chr7	74627805	74627971	(84718002)	+	MIRb	SINE/MIR	60	246	(22)	3667595
13	17.6	0.0	2.9	chr7	76358681	76358714	(82987259)	+	GA-rich	Low_complexity	1	34	(0)	3671938
23	27.0	3.6	0.0	chr7	76358916	76359003	(82986970)	+	(GCGGCT)n	Simple_repeat	1	91	(0)	3671939
13	20.1	2.0	5.8	chr7	76359060	76359110	(82986863)	+	(CCCG)n	Simple_repeat	1	52	(0)	3671940
21652	8.0	0.9	1.1	chr7	77300537	77302832	(82043141)	C	L1PB1	LINE/L1	(358)	5793	3514	3673575
15857	12.5	4.8	2.0	chr7	77488097	77490200	(81855773)	+	Tigger4	DNA/TcMar-Tigger	2	2174	(557)	3673866
15700	13.8	4.5	1.4	chr7	78931861	78934099	(80411874)	+	Tigger4	DNA/TcMar-Tigger	1	2310	(421)	3676111
275	31.4	7.1	2.3	chr7	79529389	79529561	(79816412)	+	LTR78	LTR/ERV1	621	802	(502)	3676912
22	13.8	0.0	0.0	chr7	82443816	82443855	(76902118)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	3680896
5564	26.2	7.4	3.2	chr7	82619826	82621440	(76724533)	+	MSTD-int	LTR/ERVL-MaLR	44	1735	(0)	3681177
791	18.3	9.8	0.8	chr7	90343847	90344088	(69001885)	+	L1MD3	LINE/L1	7729	7994	(1)	3690950
12	14.1	10.3	0.0	chr7	90595595	90595633	(68750340)	+	A-rich	Low_complexity	1	43	(0)	3691354
20	10.9	7.8	1.8	chr7	90596343	90596393	(68749580)	+	(GGC)n	Simple_repeat	1	55	(0)	3691355
13	9.8	0.0	0.0	chr7	90596516	90596537	(68749436)	+	(GAG)n	Simple_repeat	1	22	(0)	3691356
13704	10.4	2.7	0.1	chr7	91486124	91488106	(67857867)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	696	3692511
922	31.5	4.0	7.9	chr7	95679565	95680033	(63665940)	+	MLT1J	LTR/ERVL-MaLR	7	456	(56)	3698340
201	31.4	1.4	0.0	chr7	95680162	95680231	(63665742)	+	L2a	LINE/L2	2070	2140	(1279)	3698336
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
16135	12.8	2.0	6.3	chr7	97685307	97687149	(61658824)	+	Tigger4	DNA/TcMar-Tigger	5	1724	(1007)	3701152
23619	7.0	0.8	0.0	chr7	97810374	97816490	(61529483)	+	L1PA6	LINE/L1	174	6324	(3)	3701315
2791	2.3	1.0	0.0	chr7	97816493	97816800	(61529173)	+	AluYk11	SINE/Alu	1	311	(0)	3701316
2155	12.1	0.3	0.0	chr7	98469846	98470152	(60875821)	C	AluSx	SINE/Alu	(4)	308	1	3702674
434	28.4	4.7	1.2	chr7	99386898	99387061	(59958912)	C	MLT1K	LTR/ERVL-MaLR	(35)	560	391	3704629
248	29.5	5.9	2.1	chr7	99387062	99387158	(59958815)	C	MamRep1879	DNA/hAT-Tip100?	(17)	199	99	3704630
1918	13.6	2.6	0.0	chr7	99387160	99387453	(59958520)	+	AluSz	SINE/Alu	1	302	(10)	3704631
2371	6.0	1.0	0.7	chr7	100082302	100082600	(59263373)	+	AluSx1	SINE/Alu	1	300	(12)	3705822
12	25.9	1.9	3.6	chr7	100272046	100272099	(59073874)	+	G-rich	Low_complexity	1	55	(0)	3706205
15	9.1	0.0	0.0	chr7	100272316	100272339	(59073634)	+	(TGC)n	Simple_repeat	1	24	(0)	3706206
236	36.2	8.5	4.6	chr7	100272470	100272750	(59073223)	C	L2b	LINE/L2	(28)	3347	3055	3706207
81	0.0	0.0	0.0	chr7	100694313	100694383	(58651590)	+	(CCG)n	Simple_repeat	1	71	(0)	3707148
14	17.7	6.3	4.5	chr7	100694434	100694496	(58651477)	+	(GCCCCGAC)n	Simple_repeat	1	67	(0)	3707149
290	33.0	1.1	2.2	chr7	101580190	101580279	(57765694)	+	L2a	LINE/L2	3336	3424	(2)	3709159
413	29.2	2.1	1.4	chr7	101580284	101580422	(57765551)	+	L2c	LINE/L2	3029	3168	(219)	3709160
614	32.0	7.5	4.7	chr7	101580742	101581021	(57764952)	+	ERVL-E-int	LTR/ERVL	3986	4281	(945)	3709161
603	27.3	8.3	1.6	chr7	105594818	105595007	(53750966)	+	MER63A	DNA/hAT-Blackjack	6	209	(1)	3716199
345	27.4	5.5	0.0	chr7	105595021	105595122	(53750851)	C	L2b	LINE/L2	(5)	3370	3263	3716200
29	10.0	5.7	4.0	chr7	105876591	105876663	(53469310)	+	G-rich	Low_complexity	1	74	(0)	3716733
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
266	21.7	17.5	1.7	chr7	106056933	106057060	(53288913)	C	L2a	LINE/L2	(357)	3069	2919	3717029
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
1823	15.9	2.2	3.3	chr7	107792049	107792181	(51553792)	+	L1MB7	LINE/L1	4984	5111	(1035)	3719608
3875	11.7	0.2	0.0	chr7	107792182	107792709	(51553264)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3719609
30	0.0	0.0	0.0	chr7	112205773	112205798	(47140175)	+	(AC)n	Simple_repeat	1	26	(0)	3725450
11	11.3	6.9	0.0	chr7	116862408	116862436	(42483537)	+	(CACGCG)n	Simple_repeat	1	31	(0)	3731664
16	4.5	0.0	0.0	chr7	116862569	116862591	(42483382)	+	(GCC)n	Simple_repeat	1	23	(0)	3731665
387	34.6	1.8	6.5	chr7	118418420	118418651	(40927322)	+	Eulor6D	DNA?	78	298	(4)	3733886
16	18.6	1.9	5.5	chr7	118418972	118419025	(40926948)	+	(TAATAT)n	Simple_repeat	1	55	(0)	3733887
704	24.1	18.7	7.0	chr7	119175768	119176353	(40169620)	C	LTR41C	LTR/ERVL	(0)	768	3	3734852
2284	20.4	0.9	0.5	chr7	119594889	119595312	(39750661)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3735335
10176	13.1	2.5	0.8	chr7	124220781	124222333	(35123640)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3741568
31	31.6	2.4	0.8	chr7	128361162	128361284	(30984689)	+	(CA)n	Simple_repeat	1	126	(0)	3747075
27	0.0	0.0	3.3	chr7	128361727	128361756	(30984217)	+	(CCT)n	Simple_repeat	1	30	(0)	3747076
15	24.3	3.8	0.0	chr7	128409985	128410037	(30935936)	+	G-rich	Low_complexity	1	55	(0)	3747161
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
19	19.9	3.9	0.0	chr7	129611882	129611933	(29734040)	+	(CCGC)n	Simple_repeat	1	54	(0)	3749524
742	26.5	2.9	1.8	chr7	132551215	132551383	(26794590)	+	MLT1J2	LTR/ERVL-MaLR	189	359	(89)	3754562
2441	13.3	7.7	2.3	chr7	132757605	132758036	(26587937)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3754895
14	20.0	5.7	1.8	chr7	132762900	132762952	(26583021)	+	(CACCCTC)n	Simple_repeat	1	56	(0)	3754905
572	14.3	1.8	0.0	chr7	133167050	133167161	(26178812)	C	L1MA4	LINE/L1	(0)	6300	6187	3755518
1089	26.9	12.0	6.1	chr7	133167299	133167773	(26178200)	+	LTR33	LTR/ERVL	1	507	(8)	3755519
3498	8.6	7.9	0.4	chr7	134432178	134432666	(24913307)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3757479
613	25.4	2.6	5.6	chr7	134432667	134432705	(24913268)	+	MIRb	SINE/MIR	182	216	(52)	3757478
2364	9.7	1.3	0.0	chr7	134899195	134899502	(24446471)	C	AluSq2	SINE/Alu	(1)	312	1	3758205
1862	16.1	0.0	1.1	chr7	134899634	134899946	(24446027)	C	AluJr	SINE/Alu	(0)	312	1	3758206
752	8.7	8.6	1.4	chr7	135171123	135171262	(24174711)	+	HERV1_LTRd	LTR/ERV1	3	153	(382)	3758538
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
32	0.0	0.0	0.0	chr7	138981540	138981569	(20364404)	+	(GCCT)n	Simple_repeat	1	30	(0)	3764672
211	28.3	0.0	0.0	chr7	138982229	138982274	(20363699)	C	MIRb	SINE/MIR	(0)	268	223	3764673
249	22.8	6.1	9.8	chr7	139321069	139321170	(20024803)	+	LTR78	LTR/ERV1	16	113	(1183)	3765327
609	24.9	4.2	1.1	chr7	139321261	139321443	(20024530)	+	LTR78	LTR/ERV1	193	381	(923)	3765327
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
21	31.3	1.2	1.2	chr7	140176845	140176928	(19169045)	+	(CGC)n	Simple_repeat	1	85	(0)	3766822
27	15.7	3.4	6.5	chr7	140673118	140673206	(18672767)	+	(GCGCG)n	Simple_repeat	1	92	(0)	3767991
13	21.9	3.9	3.7	chr7	140697490	140697542	(18648431)	+	GA-rich	Low_complexity	1	53	(0)	3768042
14	10.5	4.2	8.0	chr7	141702159	141702206	(17643767)	+	(GGCG)n	Simple_repeat	1	50	(0)	3769699
15	22.0	3.6	3.5	chr7	141702222	141702277	(17643696)	+	(GCC)n	Simple_repeat	1	58	(0)	3769700
22	19.9	0.0	0.0	chr7	141737767	141737807	(17608166)	+	(T)n	Simple_repeat	1	41	(0)	3769756
1540	14.3	1.3	0.0	chr7	141737809	141738038	(17607935)	C	AluJb	SINE/Alu	(2)	310	78	3769757
25017	7.0	0.9	0.3	chr7	141752118	141755274	(17590699)	C	HERVK-int	LTR/ERVK	(3618)	3918	743	3769775
4924	9.4	4.0	1.3	chr7	144009976	144010977	(15334996)	C	MER11A	LTR/ERVK	(0)	1266	1	3772616
16	25.2	0.0	3.6	chr7	149147655	149147709	(10198264)	+	(CGG)n	Simple_repeat	1	55	(0)	3780152
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
303	32.9	0.5	0.0	chr7	149692449	149692597	(9653376)	+	L1MEg	LINE/L1	1483	1638	(869)	3781041
17	17.9	2.6	0.0	chr7	151248580	151248636	(8097337)	+	(CTCT)n	Simple_repeat	1	58	(0)	3783101
31	0.0	0.0	5.3	chr7	151248739	151248776	(8097197)	+	(CGC)n	Simple_repeat	1	38	(0)	3783102
13	18.4	4.2	8.0	chr7	151303539	151303610	(8042363)	+	(GGCTG)n	Simple_repeat	1	75	(0)	3783206
2211	8.8	3.6	0.0	chr7	151314821	151315114	(8030859)	+	AluSz	SINE/Alu	1	305	(7)	3783231
1245	25.4	14.2	2.4	chr7	151315291	151315915	(8030058)	C	Charlie2b	DNA/hAT-Charlie	(41)	2741	2031	3783232
17	0.0	0.0	0.0	chr7	151736384	151736402	(7609571)	+	(T)n	Simple_repeat	1	19	(0)	3783968
247	23.5	8.1	2.9	chr7	151736812	151736881	(7609092)	C	Plat_L3	LINE/CR1	(3)	3583	3510	3783969
308	30.5	5.9	0.0	chr7	151736883	151736977	(7608996)	C	MIRb	SINE/MIR	(133)	135	35	3783970
13	19.5	0.0	2.7	chr7	152759662	152759698	(6586275)	+	G-rich	Low_complexity	1	37	(0)	3785945
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
741	28.0	5.9	3.7	chr7	153013942	153014241	(6331732)	C	L1ME2z	LINE/L1	(404)	6040	5734	3786358
14	32.0	0.0	0.0	chr7	156892384	156892437	(2453536)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3791498
48	29.4	2.7	4.5	chr7	156892630	156892889	(2453084)	+	G-rich	Low_complexity	1	267	(0)	3791499
17	15.1	4.3	2.1	chr7	156999765	156999810	(2346163)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3791690
499	30.4	1.6	3.2	chr7	158136086	158136272	(1209701)	+	MER3	DNA/hAT-Charlie	22	205	(4)	3793020
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
825	20.2	0.5	5.5	chr7	158975450	158975648	(370325)	C	LOR1a	LTR/ERV1	(0)	497	309	3793976
1229	20.7	5.7	2.8	chr7	158975793	158975900	(370073)	+	L1MC1	LINE/L1	5992	6101	(232)	3793977
7628	12.1	5.6	2.4	chr7	158975901	158977135	(368838)	+	MER52C	LTR/ERV1	1	1276	(2)	3793978
13055	13.2	2.7	0.2	chr8	6633451	6635431	(138503205)	+	Tigger4	DNA/TcMar-Tigger	1	2031	(700)	3802359
685	29.4	13.7	2.5	chr8	9057547	9058294	(136080342)	C	L2a	LINE/L2	(0)	3426	2567	3805841
13	13.1	0.0	0.0	chr8	9150704	9150728	(135987908)	+	(GGA)n	Simple_repeat	1	25	(0)	3806005
1899	15.5	0.0	1.3	chr8	11843749	11844052	(133294584)	+	AluSx1	SINE/Alu	1	300	(12)	3810251
26	23.4	2.0	8.6	chr8	11868121	11868268	(133270368)	+	(CCCCCCG)n	Simple_repeat	1	151	(0)	3810291
17	18.2	1.8	5.4	chr8	11868276	11868330	(133270306)	+	G-rich	Low_complexity	1	56	(0)	3810292
15	22.6	3.2	4.7	chr8	12755437	12755498	(132383138)	+	(CGC)n	Simple_repeat	1	64	(0)	3811506
14	24.9	3.9	0.0	chr8	12755556	12755607	(132383029)	+	G-rich	Low_complexity	1	54	(0)	3811507
32	19.5	4.3	5.0	chr8	13265662	13265776	(131872860)	+	(TTCCC)n	Simple_repeat	1	120	(0)	3812404
12	8.9	4.2	0.0	chr8	15540512	15540535	(129598101)	+	(CTG)n	Simple_repeat	1	25	(0)	3815553
2301	16.0	5.0	0.7	chr8	15582576	15583016	(129555620)	+	MER65C	LTR/ERV1	1	461	(0)	3815608
998	13.6	2.4	0.0	chr8	16929690	16929851	(128208785)	C	L1P4	LINE/L1	(566)	5595	5430	3817473
1700	17.7	0.0	0.0	chr8	16929906	16930165	(128208471)	+	AluJr	SINE/Alu	42	301	(11)	3817474
18	14.0	2.4	2.4	chr8	17413210	17413250	(127725386)	+	(CCT)n	Simple_repeat	1	42	(0)	3818144
1721	22.9	7.0	0.0	chr8	18643366	18643789	(126494847)	C	MSTD-int	LTR/ERVL-MaLR	(43)	1692	1237	3819930
3879	23.3	4.1	2.8	chr8	18643794	18644794	(126493842)	C	MSTD-int	LTR/ERVL-MaLR	(717)	1018	4	3819930
4179	23.8	10.6	5.7	chr8	19861946	19863156	(125275480)	+	MSTD-int	LTR/ERVL-MaLR	459	1735	(0)	3821899
13	14.4	2.3	6.7	chr8	20197135	20197178	(124941458)	+	(CTTCC)n	Simple_repeat	1	45	(0)	3822435
3097	20.0	5.2	0.8	chr8	21440528	21441151	(123697485)	+	Tigger17a	DNA/TcMar-Tigger	1	653	(1)	3824411
29	31.5	1.6	5.8	chr8	22165128	22165313	(122973323)	+	G-rich	Low_complexity	1	189	(0)	3825674
51	0.0	0.0	0.0	chr8	22165883	22165926	(122972710)	+	(GT)n	Simple_repeat	1	44	(0)	3825675
15226	14.8	3.9	2.4	chr8	24115955	24117155	(121021481)	+	Tigger4	DNA/TcMar-Tigger	2	1224	(1507)	3829009
1717	19.9	2.3	0.3	chr8	24117156	24117451	(121021185)	C	AluJo	SINE/Alu	(10)	302	1	3829010
281	31.5	2.6	2.0	chr8	27591811	27591962	(117546674)	C	Charlie16a	DNA/hAT-Charlie	(127)	215	63	3834629
11	17.2	7.7	0.0	chr8	30727772	30727810	(114410826)	+	(CGCGCGC)n	Simple_repeat	1	42	(0)	3840308
890	16.1	1.2	2.4	chr8	30728259	30728426	(114410210)	C	FRAM	SINE/Alu	(10)	166	1	3840309
25	7.7	0.0	4.4	chr8	30728429	30728473	(114410163)	+	(ATTT)n	Simple_repeat	1	45	(0)	3840310
660	17.9	0.0	0.0	chr8	30728475	30728580	(114410056)	C	AluJr	SINE/Alu	(179)	133	28	3840311
6723	23.4	6.9	6.3	chr8	33759902	33761414	(111377222)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	260	3845182
13	18.8	2.6	2.6	chr8	37695584	37695621	(107443015)	+	(GCG)n	Simple_repeat	1	39	(0)	3850803
26	20.9	3.0	0.0	chr8	37695800	37695865	(107442771)	+	(CGG)n	Simple_repeat	1	68	(0)	3850804
432	20.9	0.0	1.1	chr8	38229589	38229680	(106908956)	+	Charlie1a	DNA/hAT-Charlie	867	957	(498)	3851931
228	28.5	4.4	10.3	chr8	38229771	38229915	(106908721)	+	SVA_A	Retroposon/SVA	185	320	(1067)	3851932
380	11.5	0.0	1.6	chr8	38229867	38229928	(106908708)	C	Alu	SINE/Alu	(240)	61	1	3851933
4867	24.9	4.5	5.6	chr8	39339941	39341052	(105797584)	C	MSTD-int	LTR/ERVL-MaLR	(27)	1708	627	3853760
531	31.8	6.0	4.7	chr8	41105366	41105933	(104032703)	+	L1ME3Cz	LINE/L1	4945	5513	(681)	3856432
12	17.1	4.9	2.3	chr8	41895979	41896019	(103242617)	+	(CGCAGCC)n	Simple_repeat	1	43	(0)	3857794
15	25.2	1.2	7.3	chr8	42153361	42153441	(102985195)	+	(GCGCCT)n	Simple_repeat	1	82	(0)	3858238
633	14.7	0.0	7.8	chr8	42153654	42153782	(102984854)	C	FLAM_C	SINE/Alu	(11)	132	14	3858239
15	7.5	3.3	3.2	chr8	42541301	42541330	(102597306)	+	(CCG)n	Simple_repeat	1	31	(0)	3858982
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
17078	12.1	3.2	2.5	chr8	42644587	42646045	(102492591)	+	Tigger4	DNA/TcMar-Tigger	702	2176	(555)	3859189
1372	13.6	0.3	0.4	chr8	43912803	43922406	(101216230)	+	ALR/Alpha	Satellite/centr	1	9599	(0)	3860685
2246	10.6	0.0	5.0	chr8	48749590	48749729	(96388907)	C	AluSc	SINE/Alu	(178)	131	3	3863648
5133	26.0	10.8	2.5	chr8	48749730	48750697	(96387939)	+	MSTD-int	LTR/ERVL-MaLR	637	1735	(0)	3863647
194	19.6	3.8	1.9	chr8	51613718	51613769	(93524867)	+	L2a	LINE/L2	3272	3324	(102)	3867006
200	23.6	5.2	0.0	chr8	53692934	53692988	(91445648)	C	L2a	LINE/L2	(13)	3413	3356	3869806
20	7.8	0.0	0.0	chr8	53693092	53693118	(91445518)	+	(CA)n	Simple_repeat	1	27	(0)	3869807
313	26.3	4.2	0.0	chr8	53693433	53693546	(91445090)	C	L1MEd	LINE/L1	(5131)	1955	1837	3869808
1793	22.5	2.5	5.6	chr8	55631355	55631857	(89506779)	C	MER74A	LTR/ERVL	(71)	487	3	3872640
213	34.9	0.0	0.0	chr8	55631954	55632016	(89506620)	+	MER5A	DNA/hAT-Charlie	54	116	(73)	3872642
2466	23.3	8.5	5.5	chr8	56463699	56464587	(88674049)	+	MSTB-int	LTR/ERVL-MaLR	1	918	(733)	3873971
2685	15.5	1.7	2.5	chr8	56464589	56465072	(88673564)	C	LTR39	LTR/ERV1	(303)	480	1	3873972
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
1741	9.4	0.5	0.0	chr8	60518375	60518597	(84620039)	+	AluSx1	SINE/Alu	1	224	(88)	3879297
24	0.0	0.0	0.0	chr8	60518598	60518623	(84620013)	+	(A)n	Simple_repeat	1	26	(0)	3879298
17	13.1	0.0	0.0	chr8	60518692	60518717	(84619919)	+	(TG)n	Simple_repeat	1	26	(0)	3879299
20	13.9	2.0	3.9	chr8	60678498	60678548	(84460088)	+	(GGCCCGC)n	Simple_repeat	1	52	(0)	3879588
22	23.3	1.6	1.6	chr8	61714285	61714347	(83424289)	+	(GCT)n	Simple_repeat	1	64	(0)	3880999
13	15.2	0.0	3.2	chr8	61714631	61714661	(83423975)	+	(GCCCC)n	Simple_repeat	1	31	(0)	3881000
6055	18.5	5.6	4.3	chr8	63251424	63252641	(81885995)	+	THE1D-int	LTR/ERVL-MaLR	6	1255	(325)	3882972
2159	16.1	0.3	0.0	chr8	63252642	63252940	(81885696)	C	AluSx1	SINE/Alu	(12)	300	1	3882973
108	18.8	1.7	2.0	chr8	68311754	68311994	(76826642)	+	(TCCT)n	Simple_repeat	1	245	(0)	3890529
360	30.4	0.0	3.5	chr8	68311995	68312110	(76826526)	C	MER58A	DNA/hAT-Charlie	(49)	175	64	3890530
441	24.5	0.9	0.0	chr8	69693728	69693833	(75444803)	C	MIR	SINE/MIR	(66)	196	90	3892412
542	31.9	1.2	1.8	chr8	69693834	69693999	(75444637)	C	MIRb	SINE/MIR	(69)	199	35	3892413
440	33.5	9.2	0.5	chr8	69694184	69694381	(75444255)	+	MIRb	SINE/MIR	9	225	(43)	3892414
16	28.6	1.4	2.8	chr8	70402238	70402308	(74736328)	+	(GGTGGA)n	Simple_repeat	1	72	(0)	3893734
6631	24.5	8.7	3.5	chr8	72078262	72079637	(73058999)	C	L1ME1	LINE/L1	(40)	6999	5470	3896039
487	17.6	0.0	0.0	chr8	72079638	72079722	(73058914)	+	MLT2B3	LTR/ERVL	1	85	(469)	3896040
6631	24.5	8.7	3.5	chr8	72079723	72083452	(73055184)	C	L1ME1	LINE/L1	(40)	5469	1320	3896039
3115	22.9	10.0	6.8	chr8	72254445	72255840	(72882796)	C	L1ME1	LINE/L1	(40)	6139	4610	3896249
544	14.1	0.0	0.0	chr8	72255841	72255925	(72882711)	+	MLT2B3	LTR/ERVL	1	85	(469)	3896250
3115	22.9	10.0	6.8	chr8	72255926	72256136	(72882500)	C	L1ME1	LINE/L1	(40)	4609	4377	3896249
21	18.8	0.0	0.0	chr8	72537121	72537163	(72601473)	+	GA-rich	Low_complexity	1	43	(0)	3896585
29	0.0	3.2	0.0	chr8	72537354	72537384	(72601252)	+	(CCGCCCT)n	Simple_repeat	1	32	(0)	3896586
867	18.2	0.0	0.7	chr8	73009688	73009830	(72128806)	+	AluSc8	SINE/Alu	150	291	(20)	3897252
878	15.8	2.0	2.0	chr8	73009881	73010026	(72128610)	C	AluJb	SINE/Alu	(31)	281	136	3897253
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
12	20.2	0.0	6.7	chr8	78665979	78666023	(66472613)	+	(CCCCGC)n	Simple_repeat	1	45	(0)	3904970
14	18.0	2.0	5.9	chr8	79767523	79767572	(65371064)	+	(CTCCG)n	Simple_repeat	1	51	(0)	3906479
1176	13.5	17.2	0.3	chr8	80833730	80834044	(64304592)	C	LTR26C	LTR/ERV1	(0)	539	164	3908430
7120	22.9	6.8	2.7	chr8	82114186	82115847	(63022789)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	2	3910229
12	23.1	0.0	4.5	chr8	85463509	85463552	(59675084)	+	G-rich	Low_complexity	1	44	(0)	3914607
35	0.0	0.0	0.0	chr8	85463770	85463802	(59674834)	+	(GGAGCCCC)n	Simple_repeat	1	33	(0)	3914608
14	15.9	7.1	0.0	chr8	85463829	85463870	(59674766)	+	(CCCCG)n	Simple_repeat	1	45	(0)	3914609
37	0.0	0.0	0.0	chr8	85464147	85464180	(59674456)	+	(CCCCGAT)n	Simple_repeat	1	34	(0)	3914610
438	29.9	7.2	7.5	chr8	85582387	85582762	(59555874)	+	L1ME3G	LINE/L1	268	642	(282)	3914793
18	4.5	0.0	0.0	chr8	85638257	85638279	(59500357)	+	(GT)n	Simple_repeat	1	23	(0)	3914896
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
21	21.8	2.9	7.4	chr8	86342672	86342776	(58795860)	+	G-rich	Low_complexity	1	108	(0)	3915917
15978	14.3	3.5	1.4	chr8	88453487	88454000	(56684636)	+	Tigger4	DNA/TcMar-Tigger	707	1211	(1520)	3918644
2231	10.9	0.0	0.3	chr8	88454001	88454294	(56684342)	+	AluY	SINE/Alu	1	293	(18)	3918647
920	20.9	5.3	2.0	chr8	89761974	89762173	(55376463)	+	AluJb	SINE/Alu	62	268	(44)	3920214
12	14.6	0.0	5.9	chr8	89902510	89902543	(55236093)	+	(CCGCC)n	Simple_repeat	1	34	(0)	3920466
35	5.0	0.0	0.0	chr8	90985245	90985286	(54153350)	+	(GGCGGGG)n	Simple_repeat	1	42	(0)	3921892
382	29.0	13.1	0.5	chr8	93358421	93358607	(51780029)	C	MIRc	SINE/MIR	(45)	223	10	3925090
268	30.7	4.2	3.6	chr8	93358861	93359049	(51779587)	C	MIRc	SINE/MIR	(72)	196	6	3925091
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
15	31.6	0.0	1.6	chr8	95133656	95133719	(50004917)	+	G-rich	Low_complexity	1	64	(0)	3928263
18	29.8	1.8	0.0	chr8	95133723	95133779	(50004857)	+	(GC)n	Simple_repeat	1	58	(0)	3928264
16	18.5	0.0	2.6	chr8	95133990	95134028	(50004608)	+	(CGC)n	Simple_repeat	1	39	(0)	3928265
15	19.6	0.0	0.0	chr8	96160834	96160868	(48977768)	+	(CCCCG)n	Simple_repeat	1	35	(0)	3929827
26	22.5	3.2	3.1	chr8	96160868	96160960	(48977676)	+	G-rich	Low_complexity	1	96	(0)	3929828
16	22.7	6.2	2.9	chr8	96160988	96161052	(48977584)	+	(CG)n	Simple_repeat	1	69	(0)	3929829
190	26.5	9.3	2.9	chr8	100329296	100329365	(44809271)	+	L3	LINE/CR1	3355	3429	(670)	3936575
484	31.8	5.7	2.7	chr8	100329366	100329428	(44809208)	+	CR1-3_Croc	LINE/CR1	2407	2471	(1134)	3936576
26	0.0	8.3	0.0	chr8	100329429	100329464	(44809172)	+	(AAAAC)n	Simple_repeat	1	39	(0)	3936577
484	31.8	5.7	2.7	chr8	100329465	100329772	(44808864)	+	CR1-3_Croc	LINE/CR1	2472	2789	(816)	3936576
2007	13.4	2.0	0.0	chr8	100451267	100451564	(44687072)	+	AluSx1	SINE/Alu	9	312	(0)	3936817
14	20.9	4.5	0.0	chr8	102412269	102412312	(42726324)	+	(CCCCCT)n	Simple_repeat	1	46	(0)	3940262
1742	11.5	0.3	12.1	chr8	102489226	102489356	(42649280)	C	AluJr	SINE/Alu	(187)	125	1	3940462
349	25.7	1.3	0.0	chr8	102489423	102489496	(42649140)	C	LTR16D1	LTR/ERVL	(282)	393	319	3940460
835	21.0	6.5	0.5	chr8	102489819	102489986	(42648650)	+	MLT1C	LTR/ERVL-MaLR	6	186	(281)	3940464
247	20.7	3.3	1.7	chr8	103125276	103125334	(42013302)	C	MER5A	DNA/hAT-Charlie	(90)	99	40	3941792
529	28.0	5.7	1.1	chr8	103125397	103125580	(42013056)	C	L1MEd	LINE/L1	(6332)	754	562	3941793
226	34.8	8.4	4.0	chr8	106414615	106414895	(38723741)	C	L2c	LINE/L2	(272)	3115	2821	3946497
6524	24.2	7.2	2.1	chr8	106457471	106459114	(38679522)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	3946561
17	16.1	0.0	0.0	chr8	107489938	107489966	(37648670)	+	A-rich	Low_complexity	1	29	(0)	3948053
18	3.7	3.6	0.0	chr8	108787618	108787645	(36350991)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3949880
561	25.3	3.2	6.7	chr8	108787879	108788073	(36350563)	C	MIRb	SINE/MIR	(46)	222	35	3949881
9927	14.0	2.1	0.5	chr8	109298738	109301075	(35837561)	+	L1PBa1	LINE/L1	254	2618	(4245)	3950658
200	19.7	2.4	0.0	chr8	110568248	110568298	(34570338)	+	MIRb	SINE/MIR	211	262	(0)	3952364
526	28.1	3.0	0.4	chr8	110568374	110568641	(34569995)	C	MSTC	LTR/ERVL-MaLR	(72)	324	1	3952365
5172	26.4	8.6	2.8	chr8	114681876	114683505	(30455131)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	3957665
3967	18.3	0.1	0.9	chr8	115139060	115139722	(29998914)	C	L1PA13	LINE/L1	(5504)	1477	820	3958288
2251	23.9	9.0	3.8	chr8	115166008	115167546	(29971090)	+	L1MB3	LINE/L1	2058	3715	(3133)	3958321
485	29.0	12.2	2.1	chr8	117565588	117566066	(27572570)	C	HAL1	LINE/L1	(0)	2507	1974	3961801
44	2.2	2.2	0.0	chr8	117566503	117566548	(27572088)	+	(AC)n	Simple_repeat	1	47	(0)	3961802
5995	20.1	16.9	0.8	chr8	121719049	121720517	(23418119)	C	MER52A	LTR/ERV1	(0)	1755	1	3968745
5332	10.9	2.0	0.5	chr8	122676844	122677628	(22461008)	+	L1MC1	LINE/L1	5472	6268	(65)	3970307
357	11.5	1.6	0.0	chr8	122677796	122677856	(22460780)	+	L1MC1	LINE/L1	6272	6333	(0)	3970307
270	18.5	1.8	3.6	chr8	122677865	122677920	(22460716)	C	MER58C	DNA/hAT-Charlie	(159)	56	2	3970308
1215	30.1	7.6	2.1	chr8	123605690	123606209	(21532427)	C	MLT1L	LTR/ERVL-MaLR	(40)	570	20	3972222
520	20.9	3.3	2.6	chr8	124538752	124538903	(20599733)	C	L1ME3A	LINE/L1	(17)	6156	6004	3973888
303	35.4	5.3	0.0	chr8	124539424	124539621	(20599015)	+	MIRb	SINE/MIR	48	256	(12)	3973889
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
17	21.5	5.3	3.8	chr8	130358286	130358360	(14780276)	+	(CGGCGG)n	Simple_repeat	1	79	(0)	3984839
16	0.0	0.0	0.0	chr8	130358612	130358632	(14780004)	+	(GGCG)n	Simple_repeat	1	21	(0)	3984840
400	26.2	3.7	2.8	chr8	133386338	133386443	(11752193)	C	MIR	SINE/MIR	(98)	164	58	3990344
778	21.0	6.2	0.6	chr8	133414107	133414274	(11724362)	C	MLT1E1A	LTR/ERVL-MaLR	(9)	671	494	3990397
7248	15.8	1.4	1.8	chr8	133414289	133415487	(11723149)	C	Tigger4	DNA/TcMar-Tigger	(1536)	1195	1	3990398
778	29.5	18.8	1.4	chr8	140619560	140620137	(4518499)	+	L1MC4a	LINE/L1	6263	6945	(937)	4002280
231	26.6	9.9	10.2	chr8	142717820	142718083	(2420553)	C	LTR50	LTR/ERVL	(148)	647	385	4005222
394	25.5	9.3	3.0	chr8	142718193	142718394	(2420242)	C	LTR50	LTR/ERVL	(554)	241	26	4005222
1916	26.1	10.0	4.8	chr8	142718398	142719005	(2419631)	+	L1MEg	LINE/L1	2295	2948	(3198)	4005219
1067	24.1	13.5	2.2	chr8	143039025	143039470	(2099166)	+	LTR75_1	LTR/ERV1	41	544	(2)	4005635
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
1078	14.0	0.2	0.5	chr8	143669231	143669438	(1469198)	C	LTR10B1	LTR/ERV1	(55)	492	240	4006487
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1855	14.0	0.3	2.3	chr8	143760400	143760699	(1377937)	+	AluJb	SINE/Alu	7	300	(12)	4006625
12	27.3	0.0	3.9	chr8	143761136	143761187	(1377449)	+	(GCCGGA)n	Simple_repeat	1	52	(0)	4006626
488	24.0	11.5	9.1	chr8	143761389	143761487	(1377149)	+	Charlie2b	DNA/hAT-Charlie	2172	2280	(502)	4006627
1475	14.1	4.7	2.0	chr8	143761488	143761736	(1376900)	+	AluJo	SINE/Alu	1	256	(56)	4006628
408	30.1	10.4	10.0	chr8	144103290	144103558	(1035078)	C	MIR	SINE/MIR	(3)	265	5	4007109
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
15	16.9	0.0	0.0	chr8	144291272	144291304	(847332)	+	(CTCCGG)n	Simple_repeat	1	33	(0)	4007411
17	16.8	5.3	3.3	chr8	144291348	144291404	(847232)	+	(CCCGCCAG)n	Simple_repeat	1	60	(0)	4007412
16	23.0	2.7	5.3	chr8	144291884	144291956	(846680)	+	G-rich	Low_complexity	1	75	(0)	4007413
15	10.0	0.0	7.9	chr8	144755323	144755360	(383276)	+	(CCGCC)n	Simple_repeat	1	38	(0)	4008042
275	5.4	2.1	3.6	chr9	10001	10433	(138384284)	+	(TAACCC)n	Simple_repeat	1	442	(0)	4008489
3831	12.7	31.0	1.2	chr9	10436	11574	(138383143)	C	TAR1	Satellite/telo	(13)	2098	469	4008490
260	24.5	13.0	4.1	chr9	3175580	3175677	(135219040)	+	MER20B	DNA/hAT-Charlie	70	177	(606)	4013241
16976	14.7	2.8	1.3	chr9	3800156	3802845	(134591872)	+	Tigger4	DNA/TcMar-Tigger	1	2731	(0)	4014118
410	32.9	14.6	4.1	chr9	4109725	4110139	(134284578)	+	L2c	LINE/L2	2922	3387	(0)	4014537
327	30.4	6.7	0.8	chr9	4110183	4110308	(134284409)	+	MER94	DNA/hAT-Blackjack	1	134	(0)	4014538
2431	8.2	0.3	0.3	chr9	5994896	5995199	(132399518)	C	AluSp	SINE/Alu	(9)	304	1	4017375
246	32.9	10.1	0.7	chr9	5995524	5995676	(132399041)	+	L2	LINE/L2	1897	2065	(1354)	4017376
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
2044	13.2	3.2	0.0	chr9	6681834	6682135	(131712582)	C	AluSz6	SINE/Alu	(0)	312	1	4018486
20	12.6	2.1	4.2	chr9	14314318	14314364	(124080353)	+	(CGCC)n	Simple_repeat	1	48	(0)	4028785
21	25.9	2.8	1.4	chr9	14314680	14314751	(124079966)	+	(CCT)n	Simple_repeat	1	74	(0)	4028786
13094	12.2	1.8	2.0	chr9	15994590	15996612	(122398105)	C	Tigger4	DNA/TcMar-Tigger	(710)	2021	4	4031315
5623	12.8	0.9	0.6	chr9	19857903	19859515	(118535202)	+	L1PA15	LINE/L1	4609	6230	(3)	4036992
20698	12.6	4.0	1.1	chr9	19859519	19866625	(118528092)	+	L1MA2	LINE/L1	15	7339	(384)	4036997
35	0.0	0.0	0.0	chr9	22005113	22005142	(116389575)	+	(TG)n	Simple_repeat	1	30	(0)	4039987
427	37.0	6.5	5.4	chr9	22240318	22240760	(116153957)	+	L2c	LINE/L2	2918	3365	(22)	4040309
2261	11.8	0.3	0.0	chr9	27080246	27080549	(111314168)	+	AluSx1	SINE/Alu	1	305	(7)	4046614
267	29.7	1.3	0.0	chr9	27080553	27080626	(111314091)	C	L2a	LINE/L2	(75)	3351	3277	4046615
17	8.8	5.3	2.5	chr9	35111306	35111363	(103283354)	+	(TCCCG)n	Simple_repeat	1	59	(0)	4058364
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
26	0.0	0.0	0.0	chr9	36401199	36401223	(101993494)	+	(GGGGC)n	Simple_repeat	1	25	(0)	4060562
403	27.1	4.0	7.9	chr9	36728529	36728696	(101666021)	C	L1ME4a	LINE/L1	(336)	5788	5692	4061339
277	23.0	2.2	0.5	chr9	36728848	36728936	(101665781)	+	MIR1_Amn	SINE/MIR	74	167	(63)	4061341
2072	14.4	1.0	1.3	chr9	37163235	37163415	(101231302)	+	AluSz6	SINE/Alu	130	312	(0)	4062179
2098	22.2	8.9	5.2	chr9	37163416	37163611	(101231106)	C	L1ME1	LINE/L1	(599)	5580	5371	4062178
1586	21.5	9.0	1.2	chr9	37163579	37164131	(101230586)	C	L1MC	LINE/L1	(743)	5403	4656	4062182
369	26.9	2.9	5.0	chr9	37485575	37485715	(100909002)	+	MER115	DNA/hAT-Tip100	450	587	(106)	4062763
292	33.3	5.0	3.5	chr9	37576487	37576741	(100817976)	+	L3	LINE/CR1	3736	3994	(105)	4062961
1205	16.1	0.5	0.4	chr9	40886572	40905020	(97489697)	+	ALR/Alpha	Satellite/centr	1	18474	(0)	4067934
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
1092	26.7	7.3	1.9	chr9	68667709	68668071	(69726646)	+	LTR16C	LTR/ERVL	102	485	(4)	4080226
991	18.8	2.3	4.9	chr9	69027694	69027870	(69366847)	+	MER20	DNA/hAT-Charlie	2	173	(46)	4080816
2089	16.2	2.0	0.3	chr9	69027871	69028210	(69366507)	C	Tigger3a	DNA/TcMar-Tigger	(1)	347	2	4080817
14	10.0	6.2	0.0	chr9	69035827	69035858	(69358859)	+	(ACCCAG)n	Simple_repeat	1	34	(0)	4080839
23	19.6	4.7	0.0	chr9	69035970	69036033	(69358684)	+	(GCCGCAC)n	Simple_repeat	1	67	(0)	4080840
28	14.9	1.9	1.8	chr9	69036347	69036400	(69358317)	+	(TG)n	Simple_repeat	1	55	(0)	4080841
524	33.8	2.3	4.8	chr9	69036484	69036710	(69358007)	+	MIRb	SINE/MIR	1	221	(47)	4080842
15	13.9	0.0	0.0	chr9	69671841	69671864	(68722853)	+	(AC)n	Simple_repeat	1	24	(0)	4081929
33	29.4	1.7	0.8	chr9	69672235	69672351	(68722366)	+	(CCG)n	Simple_repeat	1	119	(0)	4081930
12	9.8	0.0	0.0	chr9	69672388	69672409	(68722308)	+	(CCCT)n	Simple_repeat	1	22	(0)	4081931
13	0.0	0.0	0.0	chr9	69672556	69672572	(68722145)	+	(GCG)n	Simple_repeat	1	17	(0)	4081932
13	5.3	0.0	0.0	chr9	74952304	74952323	(63442394)	+	(GGC)n	Simple_repeat	1	20	(0)	4090268
884	24.5	0.8	9.7	chr9	75511223	75511489	(62883228)	C	L1MC4	LINE/L1	(1095)	6947	6705	4091090
27	0.0	0.0	0.0	chr9	75511491	75511516	(62883201)	+	(ATATAG)n	Simple_repeat	1	26	(0)	4091092
516	27.6	3.6	5.5	chr9	75511646	75511956	(62882761)	C	L1MC4	LINE/L1	(1414)	6468	6164	4091090
18	17.2	0.0	5.9	chr9	76394543	76394593	(62000124)	+	(GCCCC)n	Simple_repeat	1	51	(0)	4092455
448	27.7	5.5	0.0	chr9	78004521	78004674	(60390043)	+	LTR16C	LTR/ERVL	270	432	(57)	4095113
2883	23.1	17.2	5.6	chr9	78594883	78595867	(59798850)	+	MSTD-int	LTR/ERVL-MaLR	634	1735	(0)	4096005
19	7.2	0.0	0.0	chr9	79571362	79571390	(58823327)	+	(CCA)n	Simple_repeat	1	29	(0)	4097445
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
13	19.5	0.0	2.7	chr9	79572840	79572876	(58821841)	+	G-rich	Low_complexity	1	37	(0)	4097448
14327	12.4	5.1	1.9	chr9	79601369	79603706	(58791011)	+	Tigger1	DNA/TcMar-Tigger	1	2418	(0)	4097493
287	26.5	15.4	2.2	chr9	79616866	79617000	(58777717)	+	MIRb	SINE/MIR	68	223	(45)	4097503
1858	24.1	8.8	4.8	chr9	79758530	79759306	(58635411)	+	L1ME3D	LINE/L1	5413	6231	(12)	4097710
15399	14.4	3.6	2.7	chr9	81249170	81251869	(57142848)	+	Tigger4	DNA/TcMar-Tigger	1	2724	(7)	4099618
17000	13.8	1.4	2.1	chr9	82874149	82876196	(55518521)	+	Tigger4	DNA/TcMar-Tigger	1	2032	(699)	4102066
10895	16.3	1.7	1.6	chr9	83249996	83253423	(55141294)	+	L1PA11	LINE/L1	9	4484	(3097)	4102584
29	0.0	0.0	0.0	chr9	83817838	83817864	(54576853)	+	(GGGGCG)n	Simple_repeat	1	27	(0)	4103550
733	29.6	6.6	7.5	chr9	86744767	86745058	(51649659)	+	MER115	DNA/hAT-Tip100	11	299	(394)	4108391
572	26.7	12.2	0.0	chr9	86745060	86745254	(51649463)	+	MER115	DNA/hAT-Tip100	472	693	(0)	4108392
266	30.9	9.2	0.7	chr9	86745614	86745753	(51648964)	C	MIRb	SINE/MIR	(20)	248	96	4108393
957	32.6	5.6	5.3	chr9	87425855	87426443	(50968274)	C	L2	LINE/L2	(2105)	1314	715	4109455
9670	17.2	4.9	1.6	chr9	87950551	87952312	(50442405)	C	L1P4d	LINE/L1	(4966)	1969	146	4110208
19	23.6	1.2	7.0	chr9	89497856	89497940	(48896777)	+	(CCGC)n	Simple_repeat	1	86	(0)	4112562
47	17.6	4.8	4.0	chr9	89497978	89498122	(48896595)	+	(GGC)n	Simple_repeat	1	152	(0)	4112563
26	25.9	7.2	4.2	chr9	89498148	89498327	(48896390)	+	(CCTT)n	Simple_repeat	1	193	(0)	4112564
4419	25.8	8.8	2.7	chr9	90299417	90300482	(48094235)	C	BLACKJACK	DNA/hAT-Blackjack	(1794)	1175	15	4113661
27	19.2	10.4	0.8	chr9	90642901	90643015	(47751702)	+	(CGCCCTG)n	Simple_repeat	1	127	(0)	4114122
22	17.3	0.0	0.0	chr9	95771716	95771754	(42622963)	+	(TG)n	Simple_repeat	1	39	(0)	4121720
16	0.0	0.0	0.0	chr9	96417977	96417996	(41976721)	+	(GGC)n	Simple_repeat	1	20	(0)	4122833
2436	7.4	0.0	0.7	chr9	96429353	96429649	(41965068)	C	AluSx	SINE/Alu	(17)	295	1	4122860
9254	11.4	3.4	0.8	chr9	96429650	96430990	(41963727)	C	Tigger4	DNA/TcMar-Tigger	(1354)	1377	1	4122858
32	26.8	1.8	1.8	chr9	97983153	97983272	(40411445)	+	(CGCCG)n	Simple_repeat	1	120	(0)	4125544
404	35.2	10.6	4.2	chr9	98056160	98056396	(40338321)	C	MIRb	SINE/MIR	(1)	267	14	4125691
16	18.4	7.0	1.6	chr9	98056577	98056633	(40338084)	+	(CCCCG)n	Simple_repeat	1	61	(0)	4125692
14	0.0	0.0	0.0	chr9	98056747	98056764	(40337953)	+	(GGC)n	Simple_repeat	1	18	(0)	4125693
13	8.5	0.0	3.7	chr9	98056971	98056997	(40337720)	+	(CGGGG)n	Simple_repeat	1	27	(0)	4125694
261	31.3	14.6	1.9	chr9	98057100	98057314	(40337403)	+	L2b	LINE/L2	2681	2927	(492)	4125695
295	30.7	7.3	5.2	chr9	98263561	98263694	(40131023)	+	MIRb	SINE/MIR	95	231	(31)	4126201
2842	23.1	11.3	3.7	chr9	99544748	99545770	(38848947)	C	MLT1A0-int	LTR/ERVL-MaLR	(0)	1735	527	4128668
15	21.3	8.3	0.0	chr9	104926641	104926700	(33468017)	+	(CCAGC)n	Simple_repeat	1	65	(0)	4136497
2309	8.6	2.6	0.0	chr9	104926930	104927231	(33467486)	+	AluSx	SINE/Alu	1	310	(2)	4136498
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
5972	18.5	7.9	6.2	chr9	105457578	105458817	(32935900)	C	LTR2752	LTR/ERV1	(0)	1263	1	4137603
252	33.5	9.9	7.1	chr9	105693914	105694296	(32700421)	+	L2c	LINE/L2	2979	3387	(0)	4137931
17	10.0	0.0	5.6	chr9	105694838	105694873	(32699844)	+	G-rich	Low_complexity	1	36	(0)	4137932
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
16	25.9	2.9	2.9	chr9	111483551	111483618	(26911099)	+	G-rich	Low_complexity	1	70	(0)	4147932
13	27.4	0.0	6.2	chr9	111484194	111484257	(26910460)	+	G-rich	Low_complexity	1	64	(0)	4147933
4663	7.5	2.7	1.6	chr9	112399090	112400106	(25994611)	C	MER11A	LTR/ERVK	(0)	1266	1	4149752
11	19.5	10.0	1.5	chr9	113060165	113060224	(25334493)	+	(GCCAGCTGC)n	Simple_repeat	1	66	(0)	4150941
16	23.9	0.0	0.0	chr9	113876214	113876248	(24518469)	+	(C)n	Simple_repeat	1	35	(0)	4152557
35	0.0	0.0	0.0	chr9	113876277	113876308	(24518409)	+	(GCG)n	Simple_repeat	1	32	(0)	4152558
228	25.4	0.0	4.8	chr9	114504071	114504132	(23890585)	C	MIR3	SINE/MIR	(87)	121	63	4153792
15	9.4	5.6	2.6	chr9	114504708	114504743	(23889974)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	4153793
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
2193	13.9	0.0	0.0	chr9	124734412	124734721	(13659996)	+	AluSz	SINE/Alu	2	311	(1)	4173130
2000	11.3	0.4	0.7	chr9	124734848	124735121	(13659596)	C	AluSx1	SINE/Alu	(17)	295	23	4173131
23	13.2	4.7	0.0	chr9	126058340	126058382	(12336335)	+	(CT)n	Simple_repeat	1	45	(0)	4175774
2142	11.0	0.7	0.7	chr9	126773388	126773678	(11621039)	+	AluSx1	SINE/Alu	1	291	(21)	4177020
14	30.1	3.3	3.2	chr9	127612184	127612273	(10782444)	+	(CCCCGC)n	Simple_repeat	1	93	(0)	4178642
231	30.2	5.8	6.4	chr9	127916665	127916837	(10477880)	C	MIR1_Amn	SINE/MIR	(24)	184	13	4179326
27	20.3	2.6	5.8	chr9	127916990	127917101	(10477616)	+	G-rich	Low_complexity	1	108	(0)	4179327
13	25.1	3.9	4.9	chr9	128552302	128552379	(9842338)	+	(CCCTCGC)n	Simple_repeat	1	81	(0)	4180816
12	12.0	3.7	0.0	chr9	128552423	128552449	(9842268)	+	G-rich	Low_complexity	1	28	(0)	4180817
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
16	20.7	1.8	5.3	chr9	128683238	128683245	(9711472)	+	(TTTC)n	Simple_repeat	1	57	(0)	4181088
16	25.9	0.0	0.0	chr9	128683246	128683293	(9711424)	+	(TTTTTCT)n	Simple_repeat	1	48	(0)	4181089
19	11.1	3.6	6.9	chr9	129413351	129413410	(8981307)	+	(GCCGCCC)n	Simple_repeat	1	58	(0)	4182762
20	21.3	4.9	3.5	chr9	130681524	130681604	(7713113)	+	(GCGCAC)n	Simple_repeat	1	85	(0)	4185574
39	0.0	0.0	0.0	chr9	130681606	130681641	(7713076)	+	(CGC)n	Simple_repeat	1	36	(0)	4185575
13	14.8	0.0	3.1	chr9	130835203	130835234	(7559483)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4185897
16	24.9	1.9	0.0	chr9	131277715	131277766	(7116951)	+	G-rich	Low_complexity	1	53	(0)	4186722
208	29.9	6.1	1.8	chr9	133588717	133588825	(4805892)	C	MIR3	SINE/MIR	(55)	153	40	4190801
26	14.1	0.0	5.0	chr9	134326092	134326151	(4068566)	+	(GCCCCC)n	Simple_repeat	1	60	(0)	4191900
57	1.7	1.6	1.6	chr9	136051877	136051939	(2342778)	+	(AGG)n	Simple_repeat	1	64	(0)	4193971
1414	12.9	10.6	4.0	chr9	136867506	136867777	(1526940)	C	AluJb	SINE/Alu	(12)	300	9	4194891
629	28.8	8.0	1.1	chr9	136867818	136868084	(1526633)	C	Arthur1	DNA/hAT-Tip100	(3186)	761	475	4194892
2296	10.5	0.3	1.9	chr9	136868156	136868469	(1526248)	+	AluSc	SINE/Alu	1	309	(0)	4194893
553	20.3	8.9	4.7	chr9	136990384	136990533	(1404184)	C	L2a	LINE/L2	(0)	3426	3270	4195086
374	27.4	10.9	2.4	chr9	136990534	136990742	(1403975)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	332	4195087
303	21.8	7.4	4.4	chr9	136990793	136990883	(1403834)	C	MLT1F2	LTR/ERVL-MaLR	(426)	134	41	4195087
5681	22.1	7.9	4.9	chrX	6958774	6960202	(149080693)	+	MSTD-int	LTR/ERVL-MaLR	261	1735	(0)	4371022
3240	23.4	7.0	7.7	chrX	17160006	17161186	(138879709)	+	MLT1E2-int	LTR/ERVL-MaLR	223	1489	(0)	4387396
392	16.5	1.2	5.6	chrX	17635100	17635189	(138405706)	C	MER5A1	DNA/hAT-Charlie	(80)	86	1	4388174
681	0.0	0.0	0.0	chrX	18674909	18674981	(137365914)	C	tRNA-Val-GTA	tRNA	(3)	73	1	4389954
238	30.0	5.2	5.5	chrX	19736264	19736423	(136304472)	C	MIR	SINE/MIR	(66)	196	45	4391864
17	16.8	2.5	0.0	chrX	24465283	24465322	(131575573)	+	(GCTGCT)n	Simple_repeat	1	41	(0)	4399580
11	20.9	6.8	0.0	chrX	26102323	26102366	(129938529)	+	(CATTATT)n	Simple_repeat	1	47	(0)	4401972
15844	13.9	3.7	0.5	chrX	28010669	28013312	(128027583)	+	Tigger4	DNA/TcMar-Tigger	1	2731	(0)	4404617
3455	24.5	13.1	3.2	chrX	30586609	30587641	(125453254)	C	MSTB1-int	LTR/ERVL-MaLR	(0)	1651	473	4408449
2348	28.1	7.4	2.7	chrX	37852298	37853146	(118187749)	+	L1MEg	LINE/L1	164	1062	(5180)	4418055
16348	11.4	5.1	0.5	chrX	38942320	38944621	(117096274)	+	Tigger1	DNA/TcMar-Tigger	1	2414	(4)	4419760
2274	12.9	3.2	0.0	chrX	38988784	38989085	(117051810)	+	AluSx1	SINE/Alu	1	312	(0)	4419846
1340	24.9	3.9	0.0	chrX	38989408	38989724	(117051171)	C	LTR16C	LTR/ERVL	(9)	480	151	4419847
7729	18.7	9.3	3.3	chrX	39623430	39625051	(116415844)	C	MLT1A1-int	LTR/ERVL-MaLR	(5)	1730	2	4420865
24	14.6	2.5	5.0	chrX	40106346	40106407	(115934488)	+	G-rich	Low_complexity	1	60	(0)	4421772
33	11.3	1.4	5.3	chrX	40106528	40106601	(115934294)	+	(CCTCCCG)n	Simple_repeat	1	75	(0)	4421773
13	7.8	3.5	3.3	chrX	40146675	40146704	(115894191)	+	(CGCC)n	Simple_repeat	1	30	(0)	4421854
36	18.8	6.0	1.7	chrX	41276457	41276554	(114764341)	+	GA-rich	Low_complexity	1	102	(0)	4424008
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
217	22.4	0.8	3.9	chrX	44914621	44914675	(111126220)	+	MIR	SINE/MIR	58	117	(151)	4430010
386	30.3	4.2	1.6	chrX	44914679	44914866	(111126029)	+	Chap1_Mam	DNA/hAT-Charlie	91	283	(59)	4430011
13	21.0	8.1	1.5	chrX	46912197	46912258	(109128637)	+	G-rich	Low_complexity	1	67	(0)	4433039
17	11.3	5.0	2.4	chrX	46912446	46912485	(109128410)	+	(CCG)n	Simple_repeat	1	42	(0)	4433040
19	21.3	1.9	1.9	chrX	47523359	47523410	(108517485)	+	GA-rich	Low_complexity	1	53	(0)	4434355
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
602	27.1	1.7	0.6	chrX	49200472	49200642	(106840253)	C	MIR	SINE/MIR	(34)	228	56	4437695
12	17.4	2.9	2.8	chrX	50707712	50707746	(105333149)	+	(TTC)n	Simple_repeat	1	36	(0)	4439723
1121	13.6	18.6	4.5	chrX	53062573	53062818	(102978077)	C	AluJb	SINE/Alu	(0)	312	25	4442976
3129	26.5	11.4	4.3	chrX	53062829	53064218	(102976677)	C	MSTD-int	LTR/ERVL-MaLR	(349)	1386	2	4442975
235	33.9	4.8	0.2	chrX	54640098	54640214	(101400681)	+	L2c	LINE/L2	3224	3343	(44)	4446205
7491	15.1	6.7	3.8	chrX	55709202	55711843	(100329052)	C	MER41-int	LTR/ERV1	(2934)	4882	1	4447413
19	23.5	0.0	0.0	chrX	67543900	67543946	(88496949)	+	G-rich	Low_complexity	1	47	(0)	4454932
2260	10.8	0.7	2.2	chrX	70122067	70122380	(85918515)	+	AluSq2	SINE/Alu	2	310	(3)	4459147
48	3.5	3.4	0.0	chrX	70122389	70122447	(85918448)	+	(CTCTCC)n	Simple_repeat	1	61	(0)	4459148
10304	4.1	0.7	8.0	chrX	70122448	70123902	(85916993)	+	SVA_B	Retroposon/SVA	35	1383	(0)	4459149
3246	16.6	2.0	0.7	chrX	71673337	71673890	(84367005)	+	L1M3f	LINE/L1	257	817	(4511)	4462042
1123	13.8	1.4	2.7	chrX	71673889	71674112	(84366783)	C	L1M1	LINE/L1	(1730)	5835	5615	4462043
246	30.8	5.7	7.1	chrX	72018233	72018428	(84022467)	+	MIRb	SINE/MIR	8	200	(68)	4462538
365	27.2	14.4	3.9	chrX	73943786	73943965	(82096930)	+	MIRc	SINE/MIR	25	226	(42)	4464969
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
13	23.0	1.8	5.3	chrX	74924934	74924989	(81115906)	+	(CGCTGT)n	Simple_repeat	1	57	(0)	4466273
25	27.0	1.3	1.2	chrX	74924972	74925050	(81115845)	+	(CGC)n	Simple_repeat	1	80	(0)	4466274
32	31.3	0.8	1.6	chrX	74925326	74925447	(81115448)	+	(GCT)n	Simple_repeat	1	123	(0)	4466275
38	7.7	0.0	1.8	chrX	74925484	74925540	(81115355)	+	(CCT)n	Simple_repeat	1	57	(0)	4466276
542	26.5	6.1	3.1	chrX	77537313	77537503	(78503392)	+	L2	LINE/L2	1999	2195	(1224)	4468427
15	14.4	0.0	0.0	chrX	77537528	77537551	(78503344)	+	(A)n	Simple_repeat	1	24	(0)	4468428
871	16.5	0.0	0.0	chrX	77537554	77537680	(78503215)	+	FLAM_A	SINE/Alu	1	127	(15)	4468429
5126	13.0	1.8	2.0	chrX	78022818	78024386	(78016509)	C	L1PA17	LINE/L1	(48)	6118	4556	4469359
2314	22.9	8.2	1.5	chrX	78024403	78025603	(78015292)	+	L1PA15-16	LINE/L1	1055	2101	(4830)	4469361
4959	26.9	4.9	3.1	chrX	80284731	80286560	(75754335)	+	L1MA6	LINE/L1	2	2941	(4624)	4471682
2472	21.6	3.8	6.1	chrX	80286544	80287146	(75753749)	+	L1MA6	LINE/L1	6034	6605	(957)	4471682
10432	11.2	2.1	0.9	chrX	95751570	95753967	(60286928)	C	L1PA11	LINE/L1	(4)	6170	3748	4488288
302	15.7	0.0	0.0	chrX	101444210	101444261	(54596634)	+	MLT1A1	LTR/ERVL-MaLR	314	408	(0)	4496043
1677	20.3	11.4	4.5	chrX	101444252	101444674	(54596221)	+	MER31B	LTR/ERV1	2	457	(9)	4496044
4519	26.7	1.8	9.5	chrX	103441546	103442823	(52598072)	+	MSTD-int	LTR/ERVL-MaLR	479	1637	(14)	4498625
21	13.9	0.0	0.0	chrX	103687084	103687116	(52353779)	+	(T)n	Simple_repeat	1	33	(0)	4498992
12	20.2	2.9	0.0	chrX	103687836	103687869	(52353026)	+	(CCTC)n	Simple_repeat	1	35	(0)	4498993
558	24.5	2.6	0.7	chrX	106734609	106734756	(49306139)	C	L1ME3A	LINE/L1	(13)	6160	6010	4503119
12	24.1	0.0	0.0	chrX	106735033	106735066	(49305829)	+	(TGTTC)n	Simple_repeat	1	34	(0)	4503120
265	28.4	7.8	4.0	chrX	107893874	107893972	(48146923)	C	L2c	LINE/L2	(1)	3386	3284	4505004
421	26.1	12.5	11.8	chrX	107894001	107894258	(48146637)	+	L2c	LINE/L2	3117	3361	(14)	4505005
1417	15.5	1.9	12.7	chrX	109501349	109501710	(46539185)	C	LTR39	LTR/ERV1	(461)	322	1	4506941
5065	22.5	1.4	4.5	chrX	109501730	109502876	(46538019)	C	MLT1A1-int	LTR/ERVL-MaLR	(625)	1110	1	4506939
1715	17.1	4.6	0.3	chrX	109712694	109712986	(46327909)	+	AluJb	SINE/Alu	2	307	(5)	4507219
5732	4.2	0.1	0.0	chrX	111553618	111554335	(44486560)	+	L1PA7	LINE/L1	5463	6154	(0)	4510071
290	27.3	12.8	5.9	chrX	111554356	111554507	(44486388)	C	L2	LINE/L2	(1296)	2123	1960	4510072
2033	21.9	5.7	6.8	chrX	115913951	115914730	(40126165)	+	L1P4	LINE/L1	2994	3764	(2382)	4516138
20178	11.8	3.1	1.1	chrX	117352458	117357845	(38683050)	C	L1MA1	LINE/L1	(0)	7721	2230	4517636
1093	15.5	5.5	1.9	chrX	118603983	118604193	(37436702)	C	MER20	DNA/hAT-Charlie	(0)	219	1	4519552
195	35.4	8.6	4.0	chrX	118604419	118604518	(37436377)	+	L2b	LINE/L2	3259	3363	(12)	4519553
34	27.1	4.1	4.5	chrX	119237287	119237456	(36803439)	+	(GT)n	Simple_repeat	1	177	(0)	4520706
1981	11.2	0.4	5.1	chrX	119434839	119435134	(36605761)	C	AluSz	SINE/Alu	(26)	286	5	4521050
193	20.6	0.0	0.0	chrX	119435176	119435209	(36605686)	C	L2	LINE/L2	(491)	2928	2895	4521051
728	25.1	2.0	2.0	chrX	119435215	119435413	(36605482)	+	MER63A	DNA/hAT-Blackjack	9	207	(3)	4521052
29331	0.3	0.1	0.0	chrX	119435469	119441493	(36599402)	C	L1HS	LINE/L1	(0)	6155	126	4521053
37	23.6	4.3	3.5	chrX	119565630	119565767	(36475128)	+	(AT)n	Simple_repeat	1	144	(0)	4521341
1184	18.4	0.0	5.7	chrX	121468470	121468622	(34572273)	C	Tigger4a	DNA/TcMar-Tigger	(86)	150	3	4524447
1848	22.3	5.2	0.5	chrX	121468757	121469162	(34571733)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	4524449
482	21.1	2.8	2.8	chrX	123788022	123788201	(32252694)	+	L1MC4	LINE/L1	1002	1181	(5034)	4527337
1203	13.4	0.0	0.0	chrX	123788207	123788378	(32252517)	C	AluSc	SINE/Alu	(37)	272	101	4527340
1130	27.2	6.8	5.2	chrX	123788419	123788436	(32252459)	+	L1MC4	LINE/L1	1256	1273	(4942)	4527337
2237	11.5	0.3	2.2	chrX	123788437	123788748	(32252147)	+	AluSx	SINE/Alu	2	307	(5)	4527341
14	21.1	0.0	2.5	chrX	131289326	131289365	(24751530)	+	(CCCG)n	Simple_repeat	1	40	(0)	4537842
3768	22.3	3.2	2.5	chrX	132328236	132329108	(23711787)	C	MLT1A1-int	LTR/ERVL-MaLR	(2)	1733	855	4539218
1150	16.5	2.2	0.9	chrX	132329266	132329485	(23711410)	C	MLT1A1	LTR/ERVL-MaLR	(183)	225	3	4539219
18	4.1	0.0	0.0	chrX	132957457	132957481	(23083414)	+	(CGG)n	Simple_repeat	1	25	(0)	4540157
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
17	31.5	1.3	1.3	chrX	135422100	135422175	(20618720)	+	(CGGCGG)n	Simple_repeat	1	77	(0)	4544315
524	25.6	9.9	2.2	chrX	136062582	136062805	(19978090)	C	MIRb	SINE/MIR	(1)	267	25	4545306
1627	19.0	4.4	0.0	chrX	136062844	136063148	(19977747)	+	MER58B	DNA/hAT-Charlie	1	319	(22)	4545307
13	24.2	0.0	5.6	chrX	136250806	136250813	(19790082)	+	(GGCGCC)n	Simple_repeat	1	14	(40)	4545644
14	8.5	0.0	3.7	chrX	136250814	136250840	(19790055)	+	(GGC)n	Simple_repeat	1	27	(0)	4545645
13	24.2	0.0	5.6	chrX	136250841	136250859	(19790036)	+	(GGCGCC)n	Simple_repeat	15	54	(0)	4545644
14	13.1	0.0	0.0	chrX	136496720	136496745	(19544150)	+	(TCAT)n	Simple_repeat	1	26	(0)	4546082
198	28.0	0.0	0.0	chrX	136496766	136496815	(19544080)	C	L2c	LINE/L2	(39)	3348	3299	4546083
5154	25.5	11.9	2.5	chrX	138149000	138150566	(17890329)	+	MSTC-int	LTR/ERVL-MaLR	2	1735	(0)	4548895
1580	17.9	0.9	1.6	chrX	138178468	138178790	(17862105)	+	L1MC1	LINE/L1	6013	6333	(0)	4548940
703	20.1	2.1	4.5	chrX	138178951	138179148	(17861747)	+	MER53	DNA/hAT	1	193	(0)	4548941
15187	15.2	2.4	4.0	chrX	143847602	143850343	(12190552)	+	Tigger4	DNA/TcMar-Tigger	34	2731	(0)	4557108
23908	9.1	1.5	0.5	chrX	148735622	148742172	(7298723)	C	L1PB1	LINE/L1	(1)	6866	251	4563732
822	5.0	0.0	0.0	chrX	151132003	151132102	(4908793)	C	LOR1-int	LTR/ERV1	(4337)	3783	3684	4567164
8855	12.0	10.8	1.3	chrX	151132103	151133501	(4907394)	+	Tigger4	DNA/TcMar-Tigger	1001	2550	(181)	4567165
35	21.5	0.0	0.0	chrX	153401733	153401803	(2639092)	+	(T)n	Simple_repeat	1	71	(0)	4570213
42	11.8	1.1	5.4	chrX	153401804	153401822	(2639073)	+	(TGTTT)n	Simple_repeat	3	93	(0)	4570214
184	32.9	2.8	1.4	chrX	153646827	153646897	(2393998)	C	MIR3	SINE/MIR	(63)	145	74	4570530
17	17.8	4.4	0.0	chrX	153647123	153647167	(2393728)	+	(CCGCC)n	Simple_repeat	1	47	(0)	4570531
14	23.4	0.0	2.4	chrX	153971840	153971881	(2069014)	+	(GGC)n	Simple_repeat	1	42	(0)	4570996
22434	14.4	0.9	1.8	chrX	154609505	154614774	(1426121)	C	HERVK-int	LTR/ERVK	(89)	7447	2	4572167
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057