3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
492	25.9	8.1	2.9	chr1	2082512	2082686	(246873736)	C	MER63A	DNA/hAT-Blackjack	(0)	210	26	2854
1080	28.2	6.7	6.7	chr1	3332558	3333124	(245623298)	C	L1MB4	LINE/L1	(0)	6180	5614	3916
2952	22.2	7.0	3.6	chr1	15009719	15010386	(233946036)	C	L1MC5	LINE/L1	(10)	9294	8597	24351
2433	5.9	0.7	0.7	chr1	15010387	15010689	(233945733)	C	AluY	SINE/Alu	(8)	303	1	24352
23	19.2	1.9	0.0	chr1	16565983	16566036	(232390386)	+	GA-rich	Low_complexity	1	55	(0)	27764
1326	19.9	7.0	0.7	chr1	19521444	19521726	(229434696)	C	MLT2D	LTR/ERVL	(20)	394	93	33823
732	22.6	20.1	3.5	chr1	19521766	19521897	(229434525)	+	L1MC5a	LINE/L1	2110	2234	(543)	33824
2391	8.4	0.3	0.0	chr1	19521898	19522193	(229434229)	+	AluSx1	SINE/Alu	1	297	(15)	33825
17	20.6	4.0	0.0	chr1	45206721	45206770	(203749652)	+	(CGCC)n	Simple_repeat	1	52	(0)	87512
346	23.5	18.9	5.1	chr1	45207194	45207389	(203749033)	+	L2a	LINE/L2	3150	3405	(21)	87513
1580	17.3	7.2	0.3	chr1	45677991	45678326	(203278096)	+	L1MB7	LINE/L1	5824	6184	(0)	88523
252	29.1	12.7	3.7	chr1	45678504	45678831	(203277591)	+	L1MC5a	LINE/L1	2120	2481	(296)	88524
336	31.1	14.7	2.1	chr1	52612377	52612655	(196343767)	+	L2a	LINE/L2	2175	2494	(925)	101251
216	25.3	12.0	3.1	chr1	64955148	64955245	(184001177)	C	L2c	LINE/L2	(5)	3382	3275	124782
484	18.8	1.8	1.0	chr1	64955647	64955776	(184000646)	+	L1PB4	LINE/L1	5876	6005	(295)	124783
1152	21.4	11.2	1.0	chr1	64955904	64956209	(184000213)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	124784
2225	21.4	8.7	6.3	chr1	65336767	65337571	(183618851)	C	L1MC5	LINE/L1	(230)	9074	8249	125612
291	22.0	4.4	0.0	chr1	66925695	66925791	(182030631)	+	MIR3	SINE/MIR	30	136	(94)	127978
3476	29.0	9.5	3.3	chr1	68732582	68734075	(180222347)	+	L2a	LINE/L2	1536	3131	(295)	131079
25955	1.4	0.8	0.6	chr1	68734082	68736607	(180219815)	C	L1HS	LINE/L1	(0)	6155	3620	131080
644	25.1	1.8	0.0	chr1	74733574	74733736	(174222686)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	139079
27	27.3	2.6	3.3	chr1	76074604	76074720	(172881702)	+	G-rich	Low_complexity	1	120	(0)	140897
42	0.0	0.0	2.3	chr1	77219712	77219754	(171736668)	+	(TTAT)n	Simple_repeat	1	43	(0)	142523
265	29.6	17.3	1.8	chr1	81998017	81998201	(166958221)	C	MIRb	SINE/MIR	(39)	229	2	149215
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
7955	21.3	6.1	4.0	chr1	91562554	91564834	(157391588)	+	L1MC5	LINE/L1	6973	9304	(0)	162907
364	37.3	7.3	3.3	chr1	94463783	94464206	(154492216)	+	L2b	LINE/L2	2858	3294	(81)	167834
1781	24.1	11.2	4.5	chr1	94813323	94814277	(154142145)	C	L1MC5	LINE/L1	(19)	9285	8266	168355
1401	17.4	1.5	4.4	chr1	96596140	96596215	(152360207)	C	AluJb	SINE/Alu	(236)	76	1	170882
16	0.0	0.0	0.0	chr1	96596252	96596269	(152360153)	+	(A)n	Simple_repeat	1	18	(0)	170884
312	28.7	9.5	9.1	chr1	96596423	96596652	(152359770)	C	Tigger12	DNA/TcMar-Tigger	(2186)	289	59	170885
2407	23.8	1.3	3.3	chr1	115806391	115807085	(133149337)	C	L1MC5a	LINE/L1	(154)	2623	1943	198737
720	21.7	7.5	0.0	chr1	116844671	116844831	(132111591)	+	Arthur1A	DNA/hAT-Tip100	1	174	(3)	200369
2944	21.9	5.1	6.3	chr1	116844832	116845589	(132110833)	+	L1MC5a	LINE/L1	2023	2771	(6)	200368
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
282	32.4	12.1	1.1	chr1	153355323	153355516	(95600906)	+	Charlie8	DNA/hAT-Charlie	72	272	(59)	223951
37	0.0	0.0	0.0	chr1	153355743	153355776	(95600646)	+	(TGGCTGC)n	Simple_repeat	1	34	(0)	223952
213	29.7	0.0	7.2	chr1	153355878	153355946	(95600476)	C	L2c	LINE/L2	(0)	3426	3363	223953
1005	11.5	0.6	1.9	chr1	154030167	154030326	(94926096)	+	L1PB1	LINE/L1	5991	6148	(3)	225294
1660	14.5	0.0	0.0	chr1	154030335	154030575	(94925847)	C	AluJb	SINE/Alu	(49)	263	23	225295
321	6.4	8.1	1.1	chr1	154713961	154714648	(94241774)	+	(GT)n	Simple_repeat	1	744	(0)	226654
220	33.3	1.3	0.0	chr1	156697886	156697963	(92258459)	C	L2	LINE/L2	(575)	2844	2766	230597
341	34.3	4.9	0.0	chr1	156697964	156698100	(92258322)	C	MIRb	SINE/MIR	(4)	264	121	230598
1969	20.5	12.9	4.1	chr1	167475389	167476049	(81480373)	+	L1MC5	LINE/L1	8377	9104	(200)	246749
1797	19.5	7.9	7.4	chr1	204329445	204329772	(44626650)	+	L1MC5	LINE/L1	8497	8804	(500)	301365
737	21.2	0.0	0.8	chr1	204329773	204329904	(44626518)	+	FLAM_A	SINE/Alu	1	131	(11)	301366
12	8.3	9.5	4.3	chr1	205061438	205061479	(43894943)	+	(CCTTCCCG)n	Simple_repeat	1	46	(0)	302717
457	31.0	17.2	3.3	chr1	206073729	206074386	(42882036)	+	L2a	LINE/L2	2658	3426	(0)	304520
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
3549	12.3	2.9	0.2	chr1	215583131	215583661	(33372761)	C	MER41B	LTR/ERV1	(88)	546	1	319268
8037	12.2	2.8	3.3	chr1	215583662	215584977	(33371445)	C	MER41-int	LTR/ERV1	(0)	5946	4639	319268
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
1760	14.2	3.9	4.2	chr1	224461631	224461990	(24494432)	C	L1MB8	LINE/L1	(6)	6172	5814	332606
1600	13.1	2.2	9.5	chr1	224461989	224462326	(24494096)	C	L1MC1	LINE/L1	(0)	6333	6021	332607
360	26.6	4.0	7.1	chr1	225778481	225778634	(23177788)	C	Charlie4z	DNA/hAT-Charlie	(3)	164	16	334568
1520	16.7	6.8	8.2	chr1	226912340	226912648	(22043774)	+	Charlie1b	DNA/hAT-Charlie	223	521	(2)	336683
192	16.3	9.3	2.0	chr1	226912980	226913029	(22043393)	+	L2b	LINE/L2	3317	3370	(5)	336686
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
2645	6.2	0.0	0.0	chr1	232161060	232161366	(16795056)	C	AluY	SINE/Alu	(4)	307	1	344590
4124	22.1	5.3	6.1	chr1	234181364	234182457	(14773965)	C	L1MC5	LINE/L1	(223)	9081	7994	347489
217	34.6	3.3	9.0	chr1	236053454	236053742	(12902680)	+	L2b	LINE/L2	3068	3339	(36)	350882
1744	20.1	9.0	11.9	chr1	236053954	236054173	(12902249)	+	L1MC5	LINE/L1	8673	8876	(428)	350885
2096	13.0	0.0	0.0	chr1	236054174	236054465	(12901957)	+	AluSq2	SINE/Alu	1	292	(21)	350886
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2495	22.1	8.1	7.9	chr1	245104541	245105414	(3851008)	C	L1MC5a	LINE/L1	(62)	2715	1840	365478
340	32.7	8.0	3.3	chr10	3660528	3660919	(130136503)	C	L2	LINE/L2	(422)	2997	2586	375387
371	24.5	6.7	8.4	chr10	3661020	3661246	(130136176)	+	MLT1F2	LTR/ERVL-MaLR	40	262	(298)	375388
3525	16.1	4.6	5.5	chr10	3661247	3661808	(130135614)	+	L1MA8	LINE/L1	5575	6121	(170)	375389
2713	3.4	0.0	0.0	chr10	5430876	5431170	(128366252)	C	AluY	SINE/Alu	(16)	295	1	377760
3472	23.2	10.9	7.8	chr10	5431171	5431772	(128365650)	C	L1MC5	LINE/L1	(411)	8893	8265	377758
1956	10.2	17.8	4.6	chr10	5674041	5674361	(128123061)	C	MSTA	LTR/ERVL-MaLR	(34)	394	1	378103
813	17.4	2.5	9.0	chr10	5674362	5674440	(128122982)	C	AluJo	SINE/Alu	(118)	194	113	378102
974	20.3	4.7	2.8	chr10	5674441	5674688	(128122734)	C	L1MC5a	LINE/L1	(520)	2257	2005	378105
910	28.7	0.8	2.3	chr10	5674691	5674947	(128122475)	C	MIR	SINE/MIR	(6)	256	4	378106
2037	24.9	4.9	10.8	chr10	21126998	21128036	(112669386)	+	L1MC5a	LINE/L1	1599	2576	(201)	403007
4195	21.9	12.5	9.8	chr10	23134523	23135373	(110662049)	+	L1MC5	LINE/L1	8377	9248	(56)	406321
2551	17.6	0.6	4.1	chr10	31625965	31626456	(102170966)	C	L1PB4	LINE/L1	(2)	6154	5680	420524
3438	23.0	7.4	3.9	chr10	31626457	31626949	(102170473)	+	L1MC5	LINE/L1	8532	9060	(244)	420523
16	5.3	0.0	0.0	chr10	49488639	49488658	(84308764)	+	(T)n	Simple_repeat	1	20	(0)	441935
1518	17.5	5.4	5.7	chr10	52149387	52149774	(81647648)	+	MLT1B	LTR/ERVL-MaLR	1	387	(3)	445907
2567	23.9	8.9	7.2	chr10	63495780	63496406	(70301016)	+	L1MC5	LINE/L1	8379	8992	(312)	461905
810	26.9	6.0	2.8	chr10	67967555	67967953	(65829469)	+	L1MC5a	LINE/L1	2019	2359	(418)	468281
442	24.6	1.5	8.8	chr10	67967957	67968103	(65829319)	+	L1MEb	LINE/L1	12	147	(5923)	468282
1230	23.3	12.2	1.4	chr10	68920986	68921407	(64876015)	C	L1MC5	LINE/L1	(18)	9286	8813	470433
648	18.4	16.8	1.1	chr10	68921430	68921605	(64875817)	C	L1MC5	LINE/L1	(537)	8767	8559	470433
1989	22.2	7.8	1.9	chr10	68921604	68922172	(64875250)	C	L1M8	LINE/L1	(627)	1728	1124	470434
1289	28.1	5.7	1.4	chr10	86302533	86302788	(47494634)	+	L1MC5a	LINE/L1	2077	2332	(445)	499273
807	17.9	1.8	1.8	chr10	86302789	86302953	(47494469)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	499274
904	32.9	8.3	5.2	chr10	88025683	88026634	(45770788)	+	L2a	LINE/L2	2444	3426	(0)	502178
4242	18.5	6.0	1.1	chr10	93154270	93155420	(40642002)	+	L1MB5	LINE/L1	4951	6163	(11)	510548
2484	8.7	0.0	0.0	chr10	100611085	100611394	(33186028)	+	AluY	SINE/Alu	2	311	(0)	523663
2393	23.3	8.8	6.0	chr10	100611395	100611946	(33185476)	+	L1MC5a	LINE/L1	2145	2746	(31)	523662
12	15.8	0.0	11.3	chr10	102421525	102421577	(31375845)	+	(GCCCC)n	Simple_repeat	1	53	(0)	526882
291	22.1	3.3	10.2	chr10	102717017	102717124	(31080298)	+	MIR3	SINE/MIR	82	176	(32)	527443
2284	10.8	0.3	0.3	chr10	112865911	112866216	(20931206)	+	AluSz	SINE/Alu	1	306	(6)	543344
2966	22.9	5.1	3.7	chr10	112866217	112866626	(20930796)	+	L1MC5a	LINE/L1	1942	2358	(419)	543343
1291	17.8	3.9	5.6	chr10	112866628	112866791	(20930631)	+	L1MB5	LINE/L1	5887	6053	(121)	543345
383	30.9	10.6	5.8	chr10	113333975	113334252	(20463170)	C	L1ME3B	LINE/L1	(19)	6223	5931	544147
2138	22.4	2.5	4.8	chr10	113334252	113334814	(20462608)	C	L1MC5	LINE/L1	(416)	8888	8339	544148
2498	26.0	8.8	1.0	chr10	121641004	121641877	(12155545)	+	L1MC5a	LINE/L1	1817	2764	(13)	557466
3134	23.0	7.3	3.4	chr10	121718055	121719048	(12078374)	+	L1MC5	LINE/L1	8249	9284	(20)	557602
470	34.1	4.7	1.4	chr10	123065805	123066012	(10731410)	+	L2	LINE/L2	2622	2836	(583)	559719
2030	26.9	6.7	3.3	chr10	126265251	126266042	(7531380)	+	L1MC5a	LINE/L1	1782	2602	(175)	564633
1798	15.6	4.4	0.7	chr10	127287207	127287488	(6509934)	C	AluJr4	SINE/Alu	(18)	294	2	565991
5145	25.5	8.8	8.6	chr10	127287489	127288773	(6508649)	C	L1MC5a	LINE/L1	(452)	2325	1095	565989
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
246	29.3	10.2	0.0	chr11	251194	251316	(134835306)	+	L2a	LINE/L2	3289	3425	(1)	573147
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
2305	23.9	7.9	2.5	chr11	43477774	43478617	(91608005)	+	L1MC5	LINE/L1	8377	9270	(34)	638504
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
2623	7.1	0.0	0.0	chr11	61991850	61992160	(73094462)	+	AluY	SINE/Alu	1	311	(0)	661224
5726	22.1	8.6	8.3	chr11	61992217	61992560	(73094062)	C	L1MC5	LINE/L1	(523)	8781	8420	661222
244	22.6	0.0	0.0	chr11	62805977	62806029	(72280593)	+	L2a	LINE/L2	3374	3426	(0)	662835
102	23.3	0.8	0.4	chr11	69542630	69542870	(65543752)	+	(CTCCGCA)n	Simple_repeat	1	243	(0)	675260
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
2076	24.4	5.3	2.2	chr11	70767274	70767852	(64318770)	+	L1MB5	LINE/L1	5569	6166	(8)	677330
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
2214	14.1	0.0	0.0	chr11	108120920	108121217	(26965405)	+	AluJb	SINE/Alu	2	299	(13)	736286
475	26.2	14.4	1.4	chr11	121023387	121023603	(14063019)	+	MIR	SINE/MIR	1	250	(12)	757566
589	25.5	1.8	3.6	chr11	121023690	121023856	(14062766)	C	MIR3	SINE/MIR	(37)	171	8	757567
18	9.2	2.7	2.6	chr11	122580700	122580736	(12505886)	+	(GCCTCT)n	Simple_repeat	1	38	(0)	759802
51	0.0	0.0	0.0	chr11	122581045	122581088	(12505534)	+	(CA)n	Simple_repeat	1	44	(0)	759803
256	32.3	8.7	6.8	chr11	123241336	123241660	(11844962)	C	L2c	LINE/L2	(1)	3386	3055	761152
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
1627	21.1	3.4	6.4	chr12	14133068	14133523	(119141786)	C	L1MC5	LINE/L1	(190)	9114	8673	800799
5038	11.5	7.7	0.3	chr12	15688314	15689073	(117586236)	+	LTR1A2	LTR/ERV1	17	837	(0)	803141
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
2731	23.1	10.3	1.2	chr12	24420194	24421051	(108854258)	+	L1MC5	LINE/L1	7949	8893	(411)	814891
449	28.7	7.2	2.4	chr12	24421079	24421328	(108853981)	+	L1ME3B	LINE/L1	5968	6230	(12)	814892
24	11.9	1.5	7.6	chr12	31898173	31898237	(101377072)	+	G-rich	Low_complexity	1	66	(0)	826312
19	20.8	9.0	2.1	chr12	31898238	31898255	(101377054)	+	GA-rich	Low_complexity	21	97	(0)	826313
396	20.8	1.3	0.0	chr12	31898363	31898439	(101376870)	C	MER58B	DNA/hAT-Charlie	(233)	108	31	826314
1055	20.3	7.4	3.5	chr12	45737349	45737659	(87537650)	C	L1MC5a	LINE/L1	(445)	2332	2009	841294
276	19.3	0.0	1.7	chr12	45737661	45737718	(87537591)	+	MER5A	DNA/hAT-Charlie	128	184	(5)	841295
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
16	7.7	3.6	0.0	chr12	51966064	51966091	(81309218)	+	(AAGA)n	Simple_repeat	1	29	(0)	852230
1583	23.4	2.1	5.0	chr12	51966093	51966445	(81308864)	+	L1MC5	LINE/L1	8581	8928	(376)	852231
1970	16.4	0.0	0.0	chr12	51966446	51966744	(81308565)	C	AluJo	SINE/Alu	(9)	303	5	852232
643	17.4	0.0	8.0	chr12	71532911	71533048	(61742261)	+	FLAM_A	SINE/Alu	1	127	(15)	882448
2202	9.7	0.3	2.8	chr12	71533055	71533344	(61741965)	+	AluSz	SINE/Alu	1	283	(29)	882449
2890	25.6	7.1	3.1	chr12	72606687	72607760	(60667549)	C	L1MC5	LINE/L1	(0)	9304	8184	884032
18	4.5	0.0	0.0	chr12	75573116	75573138	(57702171)	+	(AC)n	Simple_repeat	1	23	(0)	887750
14	20.4	3.7	3.6	chr12	92146392	92146445	(41128864)	+	(GTGCG)n	Simple_repeat	1	56	(0)	911016
1596	24.6	4.5	3.8	chr12	94177853	94178355	(39096954)	C	L1MC5a	LINE/L1	(160)	2617	2111	914802
17	5.0	0.0	0.0	chr12	94655231	94655251	(38620058)	+	(GA)n	Simple_repeat	1	21	(0)	915580
448	30.1	7.8	4.3	chr12	104680045	104680506	(28594803)	C	L2a	LINE/L2	(0)	3426	2883	933082
4127	19.6	10.7	2.6	chr12	110212861	110213987	(23061322)	C	L1MC5	LINE/L1	(14)	9290	8062	944269
963	18.4	10.5	4.8	chr12	110879280	110879485	(22395824)	+	MER20	DNA/hAT-Charlie	1	219	(0)	945784
1127	28.3	9.0	3.3	chr12	110879486	110879668	(22395641)	C	L1MC5a	LINE/L1	(443)	2334	2166	945783
192	19.6	9.7	0.0	chr12	111244444	111244499	(22030810)	+	MIR3	SINE/MIR	40	101	(107)	946604
802	22.8	1.2	0.0	chr12	111244503	111244673	(22030636)	C	L1PA7	LINE/L1	(512)	8792	8620	946598
2001	21.4	4.7	4.9	chr12	115849670	115850160	(17425149)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	12	956918
766	16.8	2.0	2.0	chr12	115850173	115850324	(17424985)	C	L1MC5	LINE/L1	(519)	8785	8634	956919
2478	18.6	2.6	3.3	chr12	116490071	116490777	(16784532)	+	L1MB7	LINE/L1	5502	6180	(3)	958194
452	22.1	4.2	1.7	chr12	121432253	121432367	(11842942)	+	Tigger18a	DNA/TcMar-Tigger	506	623	(229)	969375
410	19.5	2.3	1.1	chr12	121432440	121432526	(11842783)	C	AluJb	SINE/Alu	(211)	101	14	969376
437	24.1	9.4	2.7	chr12	121432533	121432681	(11842628)	C	L1MC5a	LINE/L1	(488)	2289	2130	969377
2396	10.5	0.0	0.0	chr12	121479615	121479920	(11795389)	C	AluSz	SINE/Alu	(5)	307	2	969473
853	16.9	0.7	1.4	chr12	121479936	121480083	(11795226)	C	AluJo	SINE/Alu	(30)	282	136	969474
356	29.6	1.8	6.1	chr12	121480269	121480448	(11794861)	+	L1MC5a	LINE/L1	2156	2327	(450)	969460
1703	16.0	0.3	8.5	chr12	121480464	121480794	(11794515)	+	AluJo	SINE/Alu	1	304	(8)	969475
3073	16.8	3.1	0.2	chr12	123834522	123835081	(9440228)	C	L1MB5	LINE/L1	(8)	6166	5590	975035
300	11.5	0.0	0.5	chr12	124476749	124476803	(8798506)	+	L1MB5	LINE/L1	5742	5794	(389)	976124
724	8.6	1.1	0.0	chr12	124476825	124476917	(8798392)	+	FLAM_C	SINE/Alu	42	135	(8)	976125
1492	21.4	2.2	2.0	chr12	124476918	124477110	(8798199)	+	L1MB5	LINE/L1	5816	6007	(167)	976124
2246	16.5	4.2	2.7	chr12	125005148	125005316	(8269993)	C	L1MC3	LINE/L1	(355)	7430	7260	977360
429	26.1	4.2	9.2	chr12	125005296	125005486	(8269823)	C	L1MC5a	LINE/L1	(421)	2356	2163	977356
2210	8.9	0.7	3.0	chr12	125005487	125005788	(8269521)	+	AluSz	SINE/Alu	1	295	(17)	977362
4202	27.8	5.2	7.8	chr12	130232349	130232961	(3042348)	+	L1MC5	LINE/L1	2455	2514	(477)	986395
3498	19.9	3.4	2.4	chr12	131212317	131213367	(2061942)	+	L1MB7	LINE/L1	4975	6044	(140)	987862
1884	12.8	9.5	6.8	chr12	131213368	131213736	(2061573)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	987863
1186	23.6	14.9	3.3	chr12	132137741	132138284	(1137025)	C	L1MB8	LINE/L1	(41)	6137	5520	989130
1394	23.1	8.0	2.5	chr13	21221154	21221517	(93142811)	+	L1MC5a	LINE/L1	1919	2304	(473)	995765
18	12.2	0.0	0.0	chr13	21221553	21221579	(93142749)	+	(AC)n	Simple_repeat	1	27	(0)	995766
3812	17.5	6.6	9.7	chr13	21221583	21222506	(93141822)	+	MER21A	LTR/ERVL	13	905	(26)	995767
928	21.7	10.6	3.4	chr13	24424170	24424518	(89939810)	C	L1MC5a	LINE/L1	(260)	2517	2141	1000254
442	19.5	6.5	7.9	chr13	24424520	24424673	(89939655)	C	L1MC5a	LINE/L1	(1601)	1176	1024	1000254
682	23.0	15.6	3.2	chr13	27156005	27156527	(87207801)	+	L1MC5	LINE/L1	8663	9013	(291)	1004413
1412	22.0	5.5	0.7	chr13	27650622	27651038	(86713290)	+	L1MC5	LINE/L1	8093	8530	(774)	1005298
1680	21.0	9.1	0.9	chr13	27651077	27651538	(86712790)	+	L1MC5a	LINE/L1	2093	2596	(181)	1005295
26	14.0	0.0	0.0	chr13	28357849	28357889	(86006439)	+	(T)n	Simple_repeat	1	41	(0)	1006615
561	27.2	7.7	0.6	chr13	28358039	28358208	(86006120)	C	MIRb	SINE/MIR	(0)	268	86	1006616
419	26.7	22.0	0.5	chr13	28358280	28358475	(86005853)	+	MIR	SINE/MIR	2	251	(11)	1006617
2099	12.7	0.0	0.7	chr13	36974931	36975221	(77389107)	+	AluSc	SINE/Alu	1	289	(20)	1019355
1634	19.3	12.5	6.4	chr13	36975222	36975461	(77388867)	C	L1MC5	LINE/L1	(402)	8902	8670	1019354
371	28.7	9.3	3.5	chr13	36975553	36975754	(77388574)	C	L1ME4a	LINE/L1	(349)	5775	5561	1019353
1161	14.6	0.0	0.0	chr13	36975760	36975930	(77388398)	+	AluJb	SINE/Alu	22	192	(120)	1019356
358	11.7	0.0	0.0	chr13	36975932	36975991	(77388337)	+	AluJb	SINE/Alu	241	300	(2)	1019356
1637	14.5	9.2	8.6	chr13	41113445	41113687	(73250641)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	175	1025279
1831	11.0	11.4	0.0	chr13	41113688	41113951	(73250377)	C	AluSg7	SINE/Alu	(9)	300	3	1025280
1637	14.5	9.2	8.6	chr13	41113952	41114055	(73250273)	C	MLT1B	LTR/ERVL-MaLR	(216)	174	41	1025279
1790	16.4	7.5	8.9	chr13	41114060	41114460	(73249868)	+	L1MB8	LINE/L1	5745	6145	(33)	1025276
3297	23.1	6.3	3.7	chr13	42382678	42383407	(71980921)	C	L1MC5	LINE/L1	(9)	9295	8544	1027286
456	17.8	3.0	1.8	chr13	61973292	61973400	(52390928)	+	LTR27D	LTR/ERV1	1	117	(498)	1055432
16	0.0	0.0	0.0	chr13	61973403	61973419	(52390909)	+	(A)n	Simple_repeat	1	17	(0)	1055433
1820	20.6	7.2	1.5	chr13	61973557	61973989	(52390339)	+	LTR27D	LTR/ERV1	206	614	(1)	1055432
786	38.9	5.8	3.1	chr13	63446180	63446752	(50917576)	C	Charlie17b	DNA/hAT-Charlie	(566)	638	50	1057287
482	1.7	0.0	0.0	chr13	72287511	72287569	(42076759)	+	L1P2	LINE/L1	5715	5773	(382)	1068591
1867	25.5	5.6	1.5	chr13	72287760	72288357	(42075971)	+	L1MC5	LINE/L1	8676	9299	(5)	1068592
13146	9.9	9.9	1.1	chr13	72625853	72626939	(41737389)	+	L1PB1	LINE/L1	634	1867	(4996)	1069067
703	17.9	0.0	0.0	chr13	78024480	78024624	(36339704)	C	L1MA4	LINE/L1	(4)	6296	6152	1076972
1253	25.3	10.6	0.2	chr13	78024665	78025119	(36339209)	C	L1MC5	LINE/L1	(293)	9011	8504	1076971
649	27.0	12.9	3.8	chr13	78025120	78025492	(36338836)	C	L2b	LINE/L2	(756)	2663	2252	1076969
196	22.5	0.0	0.0	chr13	94550361	94550400	(19813928)	C	L2b	LINE/L2	(10)	3365	3326	1098499
65	4.2	0.0	1.3	chr13	94550535	94550610	(19813718)	+	(TGGA)n	Simple_repeat	1	76	(0)	1098500
1877	15.1	0.3	0.7	chr13	98374142	98374426	(15989902)	+	AluJb	SINE/Alu	1	284	(28)	1104579
12	14.4	0.0	0.0	chr13	98374427	98374450	(15989878)	+	(TCAA)n	Simple_repeat	1	24	(0)	1104580
568	28.0	5.0	2.4	chr13	98374459	98374670	(15989658)	C	L1MC5a	LINE/L1	(378)	2399	2182	1104581
2348	16.3	3.4	1.0	chr13	98374673	98375075	(15989253)	C	MSTB1	LTR/ERVL-MaLR	(1)	431	19	1104582
625	25.1	15.6	0.1	chr13	112927298	112927551	(1436777)	+	L1MC5	LINE/L1	7865	8142	(1162)	1124049
1493	29.5	8.2	3.5	chr13	112927600	112928303	(1436025)	+	L1MC5	LINE/L1	8564	9303	(1)	1124049
2609	22.9	6.6	8.2	chr13	113211685	113212501	(1151827)	C	L1ME1	LINE/L1	(452)	5727	4960	1124332
29	12.2	0.0	3.5	chr14	36662126	36662182	(70381536)	+	G-rich	Low_complexity	1	57	(0)	1151894
622	20.7	6.5	7.6	chr14	36791816	36792033	(70251685)	+	L1ME3A	LINE/L1	5971	6170	(3)	1152058
327	30.8	4.1	2.5	chr14	39103689	39103808	(67939910)	C	L2a	LINE/L2	(1)	3425	3304	1155116
501	27.1	5.4	7.5	chr14	50933546	50933772	(56109946)	C	L1ME3G	LINE/L1	(8)	916	695	1170703
1257	18.8	3.8	1.2	chr14	52229086	52229344	(54814374)	+	HAL1M8	LINE/L1	2722	2987	(4)	1172626
642	26.8	4.3	2.5	chr14	52229423	52229625	(54814093)	C	MLT1J	LTR/ERVL-MaLR	(304)	208	2	1172628
13689	12.5	6.0	1.8	chr14	53074727	53077039	(53966679)	+	Tigger1	DNA/TcMar-Tigger	2	2418	(0)	1174021
2253	21.9	12.5	6.9	chr14	53077040	53077663	(53966055)	C	L1MC5	LINE/L1	(474)	8830	8156	1174019
183	18.4	0.0	5.0	chr14	58772641	58772680	(48271038)	+	MIR	SINE/MIR	222	259	(3)	1182781
540	26.7	1.9	11.0	chr14	58772850	58773085	(48270633)	+	MIRb	SINE/MIR	5	218	(50)	1182786
18	16.0	0.0	0.0	chr14	60723831	60723865	(46319853)	+	(CCG)n	Simple_repeat	1	35	(0)	1185458
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
12	17.0	2.9	2.8	chr14	60724447	60724481	(46319237)	+	(CCTCC)n	Simple_repeat	1	36	(0)	1185460
352	31.4	5.4	0.7	chr14	64127571	64127711	(42916007)	C	L2	LINE/L2	(559)	2860	2713	1190723
1887	24.5	6.9	4.6	chr14	64127728	64128381	(42915337)	+	L1MC5	LINE/L1	8633	9302	(2)	1190724
2506	7.2	0.0	0.0	chr14	71628946	71629236	(35414482)	C	AluY	SINE/Alu	(20)	291	1	1203117
540	31.7	3.5	2.5	chr14	72075889	72076173	(34967545)	C	LTR101_Mam	LTR/ERVL	(258)	571	284	1203759
657	28.2	2.2	2.2	chr14	72519936	72520203	(34523515)	C	L1MC5	LINE/L1	(1)	9303	9036	1204420
3917	22.4	5.9	2.1	chr14	72520225	72521311	(34522407)	C	L1MC5	LINE/L1	(467)	8837	7707	1204420
2857	18.7	2.7	3.0	chr14	97032197	97032796	(10010922)	+	L1MB5	LINE/L1	5560	6157	(17)	1245948
2340	24.3	7.8	2.2	chr14	99927062	99927753	(7115965)	C	L1MC5	LINE/L1	(246)	9058	8322	1250837
5130	22.8	9.9	3.1	chr15	29084409	29085243	(72905946)	C	L1MC5	LINE/L1	(88)	9216	8355	1274971
1713	23.4	3.5	5.2	chr15	42855982	42856197	(59134992)	+	L1MC5a	LINE/L1	1730	1941	(836)	1295890
1077	25.6	2.6	2.6	chr15	42856204	42856584	(59134605)	+	L1MC5a	LINE/L1	2129	2509	(268)	1295890
4525	22.2	5.7	9.8	chr15	43157528	43158307	(58832882)	C	L1MC5a	LINE/L1	(0)	2777	2008	1296488
612	25.7	3.8	12.6	chr15	43158308	43158538	(58832651)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	1296489
596	28.6	13.2	1.8	chr15	48543448	48543921	(53447268)	+	L1MC5a	LINE/L1	2083	2558	(219)	1304958
3506	19.2	2.1	0.3	chr15	57347372	57348066	(44643123)	+	L1MB7	LINE/L1	5456	6163	(21)	1318544
2030	23.9	7.4	2.8	chr15	57348090	57348807	(44642382)	+	L1MC5	LINE/L1	8532	9285	(19)	1318545
898	19.3	4.1	0.0	chr15	62653938	62654149	(39337040)	C	L1MA7	LINE/L1	(5)	6286	6066	1327239
1255	22.8	10.6	4.7	chr15	62654150	62654468	(39336721)	C	L1MC5	LINE/L1	(461)	8843	8520	1327237
396	30.6	2.2	0.7	chr15	65401262	65401396	(36589793)	+	MIR3	SINE/MIR	23	159	(49)	1332535
815	17.8	8.6	7.7	chr15	65529843	65529979	(36461210)	C	MER3	DNA/hAT-Charlie	(64)	145	1	1332843
276	26.7	13.0	7.4	chr15	65530012	65530187	(36461002)	+	L2b	LINE/L2	3183	3408	(18)	1332845
6335	8.9	4.0	6.3	chr15	67298865	67299596	(34691593)	+	L1MA3	LINE/L1	5608	6305	(0)	1336388
2026	22.8	9.7	4.5	chr15	67299612	67300304	(34690885)	C	L1MC5a	LINE/L1	(468)	2309	1577	1336387
455	30.7	6.2	7.9	chr15	68280295	68280609	(33710580)	C	L2c	LINE/L2	(5)	3382	3074	1338058
1898	21.2	4.5	5.7	chr15	68949842	68950187	(33041002)	C	L1MC5	LINE/L1	(288)	9016	8675	1339362
28	11.4	0.0	0.0	chr15	68950188	68950236	(33040953)	+	(T)n	Simple_repeat	1	49	(0)	1339364
824	20.7	11.0	0.0	chr15	68950264	68950505	(33040684)	C	L1MC5	LINE/L1	(698)	8606	8335	1339362
21	18.1	0.0	0.0	chr15	71692448	71692485	(30298704)	+	(T)n	Simple_repeat	1	38	(0)	1344179
1796	11.9	10.9	2.5	chr15	72578799	72579083	(29412106)	C	AluSx	SINE/Alu	(0)	312	1	1345744
1332	21.8	6.2	6.9	chr15	72579084	72579453	(29411736)	C	L1MC5a	LINE/L1	(344)	2433	2058	1345743
745	19.3	15.4	0.6	chr15	72579519	72579695	(29411494)	+	MER3	DNA/hAT-Charlie	1	208	(1)	1345745
2174	9.9	1.0	2.0	chr15	78858307	78858608	(23132581)	+	AluSq	SINE/Alu	1	299	(14)	1356752
666	26.1	9.0	7.1	chr15	78858609	78858770	(23132419)	C	L1MC5a	LINE/L1	(464)	2313	2164	1356751
36	8.6	1.6	1.5	chr15	84143269	84143332	(17847857)	+	(GGCA)n	Simple_repeat	1	65	(0)	1365650
594	20.8	3.0	3.0	chr15	84588332	84588465	(17402724)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	1366227
230	28.8	1.7	0.0	chr15	84981097	84981155	(17010034)	C	MIR	SINE/MIR	(168)	94	35	1367055
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
21	12.6	0.0	0.0	chr15	86250919	86250965	(15740224)	+	(TGC)n	Simple_repeat	1	47	(0)	1369148
22	26.6	0.0	0.0	chr15	86250982	86251040	(15740149)	+	GA-rich	Low_complexity	1	59	(0)	1369149
2220	9.8	0.7	0.0	chr15	89642574	89642868	(12348321)	C	AluSq	SINE/Alu	(16)	297	1	1374603
326	28.0	12.9	5.6	chr15	89642869	89642968	(12348221)	C	MER113A	DNA/hAT-Charlie	(100)	214	90	1374602
713	30.9	12.3	2.2	chr15	89642971	89643148	(12348041)	+	L1MC5	LINE/L1	8672	8890	(414)	1374604
1709	18.1	3.8	3.8	chr15	89643149	89643493	(12347696)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	1374605
2639	18.5	2.3	0.8	chr15	89763808	89764320	(12226869)	+	L1MB4	LINE/L1	5643	6164	(16)	1374831
15	13.9	7.5	0.0	chr15	91138137	91138176	(10853013)	+	A-rich	Low_complexity	1	43	(0)	1377783
1234	18.2	0.0	0.0	chr15	91138205	91138407	(10852782)	+	MER3	DNA/hAT-Charlie	7	209	(0)	1377784
332	14.0	0.0	0.0	chr15	91138365	91138414	(10852775)	C	MER3	DNA/hAT-Charlie	(119)	90	41	1377785
454	21.5	3.1	0.0	chr15	91138420	91138512	(10852677)	+	L1MC5	LINE/L1	8704	8799	(505)	1377781
1834	18.0	0.9	0.3	chr15	91138520	91138837	(10852352)	+	MER2	DNA/TcMar-Tigger	26	345	(0)	1377786
24	26.7	3.1	2.0	chr15	92882610	92882706	(9108483)	+	(GCGGCGG)n	Simple_repeat	1	100	(0)	1380695
16	20.8	2.3	0.0	chr15	92882778	92882821	(9108368)	+	GA-rich	Low_complexity	1	45	(0)	1380696
250	32.8	4.9	2.1	chr15	95622968	95623107	(6368082)	C	MER67A	LTR/ERV1	(5)	538	395	1384722
21	4.1	0.0	0.0	chr15	98728005	98728029	(3263160)	+	(T)n	Simple_repeat	1	25	(0)	1389096
1910	18.1	0.3	0.0	chr16	712065	712374	(89625971)	C	AluJb	SINE/Alu	(1)	311	1	1395106
17	24.5	0.0	7.7	chr16	914760	914837	(89423508)	+	(TCCC)n	Simple_repeat	1	78	(0)	1395327
198	25.0	6.4	7.4	chr16	1092180	1092274	(89246071)	+	L2b	LINE/L2	3263	3356	(19)	1395493
2305	11.6	0.7	0.0	chr16	2016147	2016448	(88321897)	C	AluSx1	SINE/Alu	(7)	305	2	1396791
3322	16.6	9.9	3.5	chr16	2946624	2947467	(87390878)	+	L1MB8	LINE/L1	5274	6177	(1)	1398221
2285	10.2	0.0	0.7	chr16	2947480	2947782	(87390563)	+	AluSq2	SINE/Alu	2	302	(11)	1398238
2579	11.7	18.8	4.6	chr16	3363805	3364344	(86974001)	C	MER51A	LTR/ERV1	(0)	634	1	1399057
2666	20.2	4.9	1.4	chr16	3588075	3588646	(86749699)	C	L1MB5	LINE/L1	(0)	6174	5582	1399450
1609	22.6	8.4	9.0	chr16	3648737	3649481	(86688864)	C	L1MC5	LINE/L1	(315)	8989	8250	1399562
225	31.5	4.7	6.4	chr16	4625592	4625763	(85712582)	C	MIR3	SINE/MIR	(32)	176	18	1401556
2352	10.4	0.0	0.0	chr16	12359816	12360123	(77978222)	C	AluSx1	SINE/Alu	(4)	308	1	1417767
2013	25.1	4.6	3.4	chr16	12360124	12360562	(77977783)	C	L1MC5	LINE/L1	(276)	9028	8603	1417766
1938	23.3	7.2	9.6	chr16	23987252	23987643	(66350702)	C	L1MC5	LINE/L1	(403)	8901	8533	1443614
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
401	17.2	1.5	0.0	chr16	34064477	34064540	(56273805)	+	AluYj4	SINE/Alu	224	288	(23)	1463565
390	17.2	3.0	0.0	chr16	34064754	34064817	(56273528)	+	AluYj4	SINE/Alu	224	289	(22)	1463566
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
297	19.8	1.0	0.0	chr16	34097894	34097955	(56240390)	C	AluY	SINE/Alu	(26)	275	224	1463602
1931	15.6	0.0	2.3	chr16	49949649	49949950	(40388395)	+	AluJb	SINE/Alu	1	295	(17)	1471446
1246	32.5	3.8	3.5	chr16	49950011	49950752	(40387593)	+	L1MC5a	LINE/L1	2006	2754	(23)	1471447
1068	17.6	0.5	0.0	chr16	66951270	66951457	(23386888)	C	L1M4	LINE/L1	(517)	5661	5473	1500736
795	24.8	4.1	8.4	chr16	66951453	66951787	(23386558)	C	L1MC5a	LINE/L1	(409)	2368	2049	1500737
286	26.5	8.6	2.9	chr16	66951805	66951979	(23386366)	C	L1ME4b	LINE/L1	(698)	194	9	1500738
1135	22.2	9.7	2.1	chr16	67261577	67261927	(23076418)	C	L1MC5a	LINE/L1	(340)	2437	2053	1501329
38	2.5	2.4	0.0	chr16	67261928	67261968	(23076377)	+	(GT)n	Simple_repeat	1	42	(0)	1501330
1135	22.2	9.7	2.1	chr16	67261969	67261997	(23076348)	C	L1MC5a	LINE/L1	(725)	2052	2025	1501329
3618	21.1	11.3	2.0	chr16	74177495	74178664	(16159681)	+	L1MC5a	LINE/L1	1430	2721	(56)	1514141
1396	21.4	8.8	5.8	chr16	75352813	75353359	(14984986)	+	L1MC5	LINE/L1	8548	9112	(192)	1516594
2356	27.5	8.9	6.0	chr16	81511028	81511570	(8826775)	C	L1MC5a	LINE/L1	(22)	2755	2182	1527429
1968	15.5	0.0	0.3	chr16	81511571	81511861	(8826484)	C	AluJb	SINE/Alu	(22)	290	1	1527430
4718	24.6	7.6	3.1	chr16	82823441	82825168	(7513177)	+	L1MC5	LINE/L1	7492	9303	(1)	1529887
385	19.5	6.1	0.0	chr16	84155893	84155969	(6182376)	C	L1MC5a	LINE/L1	(154)	2623	2542	1532246
1968	15.0	0.3	0.0	chr16	84155970	84156262	(6182083)	C	AluSq	SINE/Alu	(19)	294	1	1532247
1928	25.1	5.4	2.2	chr16	84156271	84156809	(6181536)	C	L1MC5a	LINE/L1	(471)	2306	1750	1532246
2325	10.1	0.3	0.0	chr16	84437519	84437815	(5900530)	C	AluSx	SINE/Alu	(14)	298	1	1532842
1783	21.7	1.4	5.7	chr16	84437816	84438146	(5900199)	C	L1MB7	LINE/L1	(125)	6059	5736	1532840
64	21.7	0.0	0.0	chr16	87231802	87231967	(3106378)	+	(TA)n	Simple_repeat	1	166	(0)	1538054
822	29.3	4.9	0.4	chr16	87231985	87232255	(3106090)	C	L1MC5	LINE/L1	(480)	8824	8541	1538053
1030	24.8	8.0	0.6	chr16	88007870	88008315	(2330030)	C	L1MB7	LINE/L1	(20)	6164	5664	1539458
16	14.9	0.0	0.0	chr16	88320950	88320980	(2017365)	+	(GAAT)n	Simple_repeat	1	31	(0)	1539804
653	13.5	7.4	0.0	chr16	88321231	88321356	(2016989)	C	MLT2C1	LTR/ERVL	(95)	302	167	1539805
972	19.4	0.0	0.0	chr16	89566518	89566682	(771663)	+	AluJr	SINE/Alu	137	301	(11)	1541487
1944	16.9	0.0	0.0	chr17	2859446	2859735	(80397706)	C	AluSx1	SINE/Alu	(22)	290	1	1550117
1813	21.0	8.3	9.0	chr17	2859736	2860008	(80397433)	C	L1MC5	LINE/L1	(450)	8854	8566	1550114
442	33.0	10.9	0.0	chr17	2898752	2898930	(80358511)	C	MIRb	SINE/MIR	(3)	265	65	1550207
1008	21.3	0.9	0.4	chr17	2898945	2899174	(80358267)	C	L1MB7	LINE/L1	(158)	6026	5801	1550208
2179	6.9	0.4	2.8	chr17	2899193	2899510	(80357931)	C	AluY	SINE/Alu	(0)	311	1	1550209
1907	17.7	6.9	2.2	chr17	8841240	8841683	(74415758)	+	MER31B	LTR/ERV1	1	466	(0)	1561572
266	24.0	0.0	13.8	chr17	8841684	8841754	(74415687)	+	MER113	DNA/hAT-Charlie	460	515	(6)	1561571
483	25.4	9.6	4.5	chr17	8841756	8841836	(74415605)	+	LTR16B2	LTR/ERVL	1	79	(383)	1561573
2331	12.0	5.5	2.9	chr17	8841837	8842256	(74415185)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1561574
1491	27.6	4.4	7.6	chr17	12843957	12844174	(70413267)	C	L1MEb	LINE/L1	(5519)	551	333	1568754
1817	20.8	2.5	0.0	chr17	12844175	12844558	(70412883)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	1568756
1491	27.6	4.4	7.6	chr17	12844559	12844909	(70412532)	C	L1MEb	LINE/L1	(5738)	332	7	1568754
17	20.6	4.0	0.0	chr17	13602592	13602642	(69654799)	+	(GTTT)n	Simple_repeat	1	53	(0)	1570039
3777	18.5	2.9	2.1	chr17	17048563	17049328	(66208113)	+	L1MB5	LINE/L1	5365	6136	(38)	1576025
984	26.9	6.4	1.8	chr17	17613827	17614167	(65643274)	+	L1MC5	LINE/L1	8576	8933	(371)	1576971
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
14076	21.5	0.2	0.1	chr17	26878921	26879385	(56378056)	+	(TGGAA)n	Simple_repeat	4	470	(0)	1585978
354	19.1	1.6	0.0	chr17	26879386	26879448	(56377993)	+	AluYj4	SINE/Alu	224	287	(24)	1585979
14076	21.5	0.2	0.1	chr17	26879448	26880125	(56377316)	+	(TGGAA)n	Simple_repeat	1	678	(0)	1585980
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26937237	26937936	(56319505)	+	(GAATG)n	Satellite	5	705	(0)	1585990
395	19.4	1.6	0.0	chr17	26937941	26938002	(56319439)	+	AluSc	SINE/Alu	223	285	(24)	1585991
1545	18.6	0.5	0.9	chr17	26938006	26938444	(56318997)	+	(GAATG)n	Satellite	3	440	(0)	1585992
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
217	20.3	0.0	14.7	chr17	30095142	30095216	(53162225)	C	AmnSINE1	SINE/5S-Deu-L2	(416)	159	96	1591905
1774	14.5	4.0	2.7	chr17	30393861	30394116	(52863325)	+	AluJo	SINE/Alu	3	256	(56)	1592510
31	0.0	0.0	0.0	chr17	30394117	30394145	(52863296)	+	(T)n	Simple_repeat	1	29	(0)	1592511
1774	14.5	4.0	2.7	chr17	30394146	30394186	(52863255)	+	AluJo	SINE/Alu	262	303	(9)	1592510
250	29.6	14.6	5.4	chr17	30394374	30394559	(52862882)	+	L2c	LINE/L2	3122	3327	(60)	1592512
350	29.4	4.0	0.2	chr17	31592057	31592205	(51665236)	+	MIR3	SINE/MIR	26	180	(28)	1594890
2453	24.9	5.6	6.2	chr17	31592220	31592445	(51664996)	+	L1MC5	LINE/L1	8437	8672	(632)	1594891
52	0.0	0.0	0.0	chr17	31592446	31592492	(51664949)	+	(TATC)n	Simple_repeat	1	47	(0)	1594892
2453	24.9	5.6	6.2	chr17	31592493	31592678	(51664763)	+	L1MC5	LINE/L1	8673	8861	(443)	1594891
2451	8.6	0.0	0.0	chr17	31592679	31592980	(51664461)	+	AluSq	SINE/Alu	2	303	(10)	1594893
423	30.2	4.8	1.6	chr17	41930142	41930323	(41327118)	C	MIRc	SINE/MIR	(58)	210	20	1614595
2343	8.8	1.6	0.0	chr17	42236439	42236735	(41020706)	C	AluSx1	SINE/Alu	(9)	303	2	1615204
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
195	38.2	2.6	2.6	chr17	46789257	46789369	(36468072)	C	MamSINE1	SINE/tRNA-RTE	(89)	201	89	1624718
477	30.7	4.1	0.0	chr17	46789501	46789663	(36467778)	+	L1MC5a	LINE/L1	2087	2256	(521)	1624719
2725	20.1	10.5	6.8	chr17	49347564	49347735	(33909706)	+	L1MC5	LINE/L1	8527	8678	(626)	1629754
2014	14.4	0.7	0.7	chr17	49347736	49348041	(33909400)	C	AluJr	SINE/Alu	(2)	310	5	1629756
2725	20.1	10.5	6.8	chr17	49348042	49348210	(33909231)	+	L1MC5	LINE/L1	8679	8839	(465)	1629754
1465	16.7	7.0	1.9	chr17	49348211	49348479	(33908962)	+	AluJr4	SINE/Alu	1	284	(28)	1629757
1437	23.3	6.8	7.8	chr17	50162218	50162868	(33094573)	+	L1MC5	LINE/L1	8215	8858	(446)	1631263
121	14.7	1.8	0.9	chr17	50162869	50163090	(33094351)	+	GA-rich	Low_complexity	1	226	(0)	1631264
431	28.1	10.4	5.1	chr17	51324026	51324294	(31933147)	C	L1ME3B	LINE/L1	(6)	6167	5937	1633558
3547	22.4	4.3	2.3	chr17	51324304	51324908	(31932533)	C	L1MC5	LINE/L1	(412)	8892	8266	1633559
1016	30.1	9.2	2.1	chr17	53582383	53583099	(29674342)	C	L2a	LINE/L2	(2)	3424	2651	1636933
2594	9.0	0.3	0.0	chr17	60172862	60173172	(23084269)	+	AluSp	SINE/Alu	1	312	(1)	1648725
16	7.3	0.0	3.1	chr17	60173173	60173198	(23084243)	+	(AAAT)n	Simple_repeat	2	26	(0)	1648726
3112	23.7	5.1	8.9	chr17	62936884	62937986	(20319455)	+	L1MC5	LINE/L1	7868	8623	(681)	1653986
622	24.4	3.5	2.9	chr17	73083165	73083337	(10174104)	C	Charlie2a	DNA/hAT-Charlie	(2639)	222	49	1671588
2100	24.9	6.2	2.2	chr17	73083475	73084155	(10173286)	+	L1MC5a	LINE/L1	2052	2761	(16)	1671589
240	20.8	0.0	0.0	chr17	73616980	73617027	(9640414)	+	L2a	LINE/L2	3378	3425	(1)	1672662
2760	20.6	4.0	0.4	chr17	74296518	74297068	(8960373)	C	L1M4	LINE/L1	(6943)	574	3	1673866
2363	8.1	0.0	2.3	chr17	74297083	74297389	(8960052)	C	AluY	SINE/Alu	(9)	302	3	1673878
1007	17.9	1.6	0.5	chr17	77138661	77138844	(6118597)	+	AluJo	SINE/Alu	120	305	(7)	1679531
257	21.5	2.5	6.0	chr17	77138879	77138962	(6118479)	C	L1ME3A	LINE/L1	(0)	6173	6093	1679532
682	20.4	6.8	1.6	chr17	77138964	77139157	(6118284)	C	L1MC5	LINE/L1	(426)	8878	8674	1679533
2098	10.2	1.0	3.0	chr17	77139161	77139463	(6117978)	C	AluSx1	SINE/Alu	(7)	305	9	1679534
288	24.4	7.2	4.3	chr17	80650508	80650601	(2606840)	+	MIRc	SINE/MIR	12	108	(160)	1685366
121	22.7	0.4	8.2	chr17	80929972	80930312	(2327129)	+	(CTCAG)n	Simple_repeat	1	313	(0)	1685673
32	10.5	0.0	6.5	chr17	80930313	80930405	(2327036)	+	(CAGCT)n	Simple_repeat	1	93	(0)	1685674
121	22.7	0.4	8.2	chr17	80930406	80930537	(2326904)	+	(CTCAG)n	Simple_repeat	4	127	(0)	1685675
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
659	22.5	4.4	1.7	chr17	81793921	81794546	(1462895)	+	(CA)n	Simple_repeat	1	626	(0)	1686735
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
421	21.4	0.2	0.0	chr18	3997465	3997562	(76375723)	C	L1MC5	LINE/L1	(506)	8798	8712	1695383
358	7.3	1.8	0.0	chr18	3997563	3997617	(76375668)	C	L1MC5	LINE/L1	(550)	8754	8699	1695384
969	15.1	3.0	11.2	chr18	3997626	3997954	(76375331)	C	MER33	DNA/hAT-Charlie	(0)	324	24	1695385
1955	12.9	0.0	0.0	chr18	6695803	6696073	(73677212)	+	AluSz	SINE/Alu	34	304	(8)	1698923
1471	23.1	4.2	3.4	chr18	6696078	6696241	(73677044)	C	L1MC5	LINE/L1	(492)	8812	8643	1698921
2747	9.1	0.8	0.8	chr18	6696242	6696616	(73676669)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1698924
2452	22.2	10.8	6.6	chr18	22405015	22405881	(57967404)	+	L1MC5a	LINE/L1	1847	2755	(22)	1714515
2119	14.4	2.1	5.2	chr18	24534735	24535137	(55838148)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1718129
2526	23.4	6.2	2.5	chr18	30120050	30120782	(50252503)	+	L1MD2	LINE/L1	5973	6734	(16)	1725906
4557	23.3	8.8	2.3	chr18	32490627	32491586	(47881699)	+	L1MC5	LINE/L1	8260	9276	(28)	1729437
1453	20.8	6.4	3.4	chr18	35667408	35667815	(44705470)	C	L1MC5	LINE/L1	(194)	9110	8690	1733649
673	21.7	13.9	3.2	chr18	35667986	35668361	(44704924)	+	L1M5	LINE/L1	2920	3342	(2804)	1733657
4792	14.0	0.2	5.3	chr18	37167058	37167893	(43205392)	C	LTR1A2	LTR/ERV1	(0)	837	44	1735696
1540	15.4	2.8	0.0	chr18	37167894	37168173	(43205112)	+	L1M4	LINE/L1	3664	3951	(2195)	1735695
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
3448	21.3	2.6	6.3	chr18	74404682	74405452	(5967833)	C	L1MB5	LINE/L1	(0)	6174	5435	1789836
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
2489	6.4	0.0	4.6	chr19	1893555	1893880	(56723736)	+	AluY	SINE/Alu	1	311	(0)	1799696
1904	24.2	3.6	4.6	chr19	1893881	1894193	(56723423)	+	L1MB3	LINE/L1	5822	6132	(51)	1799694
2589	4.5	0.7	0.0	chr19	1894194	1894501	(56723115)	+	AluY	SINE/Alu	1	310	(1)	1799697
38	13.2	0.0	5.9	chr19	2345367	2345481	(56272135)	+	(CCTAAC)n	Simple_repeat	1	108	(0)	1800586
327	27.6	5.8	3.9	chr19	2345958	2346059	(56271557)	C	L1MEd	LINE/L1	(5011)	2075	1972	1800587
44	27.9	4.7	2.9	chr19	3761262	3761493	(54856123)	+	(CCCCAGA)n	Simple_repeat	1	243	(0)	1803978
438	20.5	5.5	2.7	chr19	3762089	3762241	(54855375)	+	MIRb	SINE/MIR	102	259	(3)	1803979
1869	15.7	0.3	2.3	chr19	5534686	5534985	(53082631)	C	AluJr	SINE/Alu	(18)	294	1	1808284
830	12.8	8.1	0.0	chr19	5535464	5535588	(53082028)	+	AluJb	SINE/Alu	1	136	(176)	1808285
398	27.0	9.9	3.5	chr19	6648038	6648153	(51969463)	C	L1MC5	LINE/L1	(458)	8846	8719	1810812
1246	24.8	6.5	0.3	chr19	6648154	6648473	(51969143)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	1810813
17	18.1	4.5	0.0	chr19	8374376	8374419	(50243197)	+	(TTCT)n	Simple_repeat	1	46	(0)	1815172
1993	13.8	0.0	1.0	chr19	8374493	8374790	(50242826)	+	AluSz	SINE/Alu	1	295	(17)	1815173
2316	21.5	5.1	0.5	chr19	18717997	18718328	(39899288)	C	L1MB5	LINE/L1	(9)	6165	5827	1839439
1879	17.5	0.0	1.9	chr19	18718329	18718642	(39898974)	C	AluJb	SINE/Alu	(4)	308	1	1839440
2153	12.2	1.0	0.0	chr19	19686853	19687156	(38930460)	+	AluSz6	SINE/Alu	1	307	(5)	1841442
12	27.7	0.0	2.2	chr19	19687319	19687363	(38930253)	+	(CTCC)n	Simple_repeat	1	45	(0)	1841443
15	19.7	0.0	0.0	chr19	34926695	34926723	(23690893)	+	(T)n	Simple_repeat	1	29	(0)	1859341
2465	9.6	0.3	0.0	chr19	36176469	36176780	(22440836)	C	AluSq2	SINE/Alu	(0)	313	1	1862044
3402	22.2	8.5	6.3	chr19	36176781	36177307	(22440309)	+	L1MC5	LINE/L1	8463	9012	(292)	1862040
2477	6.8	0.3	0.7	chr19	36190295	36190603	(22427013)	+	AluSp	SINE/Alu	1	308	(5)	1862078
597	23.6	3.2	8.1	chr19	36190604	36190694	(22426922)	+	MLT1D	LTR/ERVL-MaLR	106	188	(317)	1862077
2386	9.1	0.0	2.8	chr19	36190701	36191020	(22426596)	+	AluSz	SINE/Alu	1	311	(1)	1862079
237	21.1	0.0	1.9	chr19	37469922	37469974	(21147642)	+	MER5B	DNA/hAT-Charlie	127	178	(0)	1864484
874	13.3	0.0	0.8	chr19	38556562	38556689	(20060927)	C	AluJo	SINE/Alu	(185)	127	1	1866939
370	21.2	11.5	10.2	chr19	38556690	38556748	(20060868)	C	MER33	DNA/hAT-Charlie	(154)	170	113	1866936
844	26.1	7.8	4.4	chr19	38556773	38557045	(20060571)	C	L1MC5	LINE/L1	(506)	8798	8516	1866935
1253	12.3	0.0	0.0	chr19	38557048	38557217	(20060399)	C	AluSx	SINE/Alu	(6)	306	137	1866940
117	0.0	0.0	0.0	chr19	46389363	46389461	(12228155)	+	(AC)n	Simple_repeat	1	99	(0)	1883532
572	25.8	7.8	2.6	chr19	46389573	46389767	(12227849)	C	L1MC5	LINE/L1	(421)	8883	8678	1883530
12	29.1	0.0	6.9	chr19	46389807	46389878	(12227738)	+	(CCCTCC)n	Simple_repeat	1	72	(0)	1883533
18	21.3	3.2	3.1	chr19	46389909	46389971	(12227645)	+	(TCTCTG)n	Simple_repeat	1	65	(0)	1883534
2435	10.3	0.0	0.0	chr19	47767720	47768031	(10849585)	C	AluSx1	SINE/Alu	(0)	312	1	1887008
567	20.0	6.5	0.0	chr19	47768039	47768168	(10849448)	+	L1MC5	LINE/L1	8693	8831	(473)	1887009
2194	11.8	0.0	3.2	chr19	47768192	47768504	(10849112)	+	AluSx4	SINE/Alu	1	303	(7)	1887010
743	16.0	2.5	0.0	chr19	49797801	49797919	(8819697)	+	FLAM_C	SINE/Alu	2	123	(20)	1891972
15	5.6	0.0	0.0	chr19	54418548	54418566	(4199050)	+	(CA)n	Simple_repeat	1	19	(0)	1901704
536	19.0	11.4	8.7	chr19	55639911	55640049	(2977567)	C	MER3	DNA/hAT-Charlie	(56)	153	2	1904215
13	22.0	2.7	0.0	chr19	55640125	55640161	(2977455)	+	(GCT)n	Simple_repeat	1	38	(0)	1904217
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
12	22.0	2.7	0.0	chr19	56088985	56089021	(2528595)	+	(GCGGCC)n	Simple_repeat	1	38	(0)	1905091
199	32.0	15.5	2.3	chr19	56089234	56089361	(2528255)	+	L2a	LINE/L2	3261	3408	(18)	1905092
1988	20.7	1.5	2.6	chr19	56292584	56293000	(2324616)	C	L1MB3	LINE/L1	(45)	6138	5721	1905560
358	26.8	10.4	1.2	chr19	56293181	56293374	(2324242)	C	MIR	SINE/MIR	(22)	246	9	1905562
3082	19.8	2.0	0.6	chr2	3133134	3133784	(239059745)	+	L1MB3	LINE/L1	5520	6179	(4)	1914113
1309	20.4	15.8	8.7	chr2	32090363	32091031	(210102498)	C	L1MC5	LINE/L1	(139)	9165	8440	1959517
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
299	31.9	7.8	3.4	chr2	38336644	38336854	(203856675)	+	MIRb	SINE/MIR	10	252	(10)	1969022
1760	22.9	10.0	4.4	chr2	38336860	38337202	(203856327)	+	L1MC5	LINE/L1	8603	8961	(343)	1969023
19	11.2	0.0	0.0	chr2	39121123	39121151	(203072378)	+	(GA)n	Simple_repeat	1	29	(0)	1970593
492	13.3	1.0	7.5	chr2	39776277	39776382	(202417147)	+	L1MC5	LINE/L1	8663	8761	(543)	1971726
2352	9.5	1.0	0.0	chr2	39776395	39776689	(202416840)	C	AluSx	SINE/Alu	(13)	299	2	1971727
1691	20.6	2.5	2.8	chr2	39818740	39819094	(202374435)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	12	1971785
4753	21.5	7.5	2.3	chr2	55098361	55099607	(187093922)	C	L1MC5	LINE/L1	(4)	9300	7984	1995291
22	11.8	0.0	0.0	chr2	60615922	60615958	(181577571)	+	(TCTC)n	Simple_repeat	1	37	(0)	2002678
191	27.3	5.9	7.2	chr2	60616093	60616230	(181577299)	+	L2a	LINE/L2	2940	3075	(312)	2002679
198	24.6	0.2	0.0	chr2	60616392	60616442	(181577087)	+	L2a	LINE/L2	3374	3418	(8)	2002679
2170	10.4	3.7	0.0	chr2	61232871	61233159	(180960370)	C	AluSx	SINE/Alu	(12)	300	1	2003928
1263	26.4	7.7	6.2	chr2	61233243	61233543	(180959986)	+	L1MC5a	LINE/L1	2167	2480	(297)	2003929
2380	13.2	1.1	2.2	chr2	64603885	64604249	(177589280)	C	L1PA16	LINE/L1	(0)	6166	5806	2009636
1089	29.9	3.6	2.7	chr2	64604250	64604392	(177589137)	C	L1MC5a	LINE/L1	(456)	2321	2180	2009635
681	29.0	11.3	0.3	chr2	64604516	64604847	(177588682)	+	L2a	LINE/L2	3052	3424	(2)	2009637
314	16.0	0.0	0.0	chr2	69572150	69572199	(172621330)	C	MER96B	DNA/hAT-Tip100	(0)	417	368	2017312
1109	16.2	6.2	3.0	chr2	69572202	69572347	(172621182)	+	MER96B	DNA/hAT-Tip100	171	315	(102)	2017313
1724	23.9	9.9	8.1	chr2	73152578	73153580	(169039949)	+	L1MC5a	LINE/L1	2033	2985	(6)	2023205
12	18.1	2.4	4.8	chr2	74715401	74715441	(167478088)	+	(CGCGG)n	Simple_repeat	1	42	(0)	2025835
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2733	19.7	7.2	2.9	chr2	101012059	101012712	(141180817)	+	L1MB8	LINE/L1	5495	6178	(0)	2058846
4029	22.8	12.6	1.8	chr2	101676401	101677542	(140515987)	+	BLACKJACK	DNA/hAT-Blackjack	110	1382	(1587)	2060038
368	20.7	2.6	4.3	chr2	101677583	101677698	(140515831)	C	L1MC5a	LINE/L1	(541)	2236	2123	2060040
209	33.6	12.1	0.0	chr2	101677777	101677892	(140515637)	+	MIR3	SINE/MIR	37	168	(40)	2060041
1259	25.6	2.0	0.9	chr2	105939531	105939880	(136253649)	+	L1MC5a	LINE/L1	1917	2270	(507)	2065685
1257	25.9	6.5	2.5	chr2	105939901	105940080	(136253449)	C	MLT1A	LTR/ERVL-MaLR	(6)	368	168	2065686
2360	8.7	0.0	2.6	chr2	105940081	105940389	(136253140)	C	AluY	SINE/Alu	(10)	301	1	2065687
1845	27.8	3.2	2.5	chr2	109327888	109328562	(132864967)	C	L1MC5a	LINE/L1	(0)	2777	2098	2070582
2455	9.5	0.0	0.0	chr2	109599176	109599480	(132594049)	+	AluSz	SINE/Alu	1	305	(7)	2070925
262	28.1	15.2	3.5	chr2	109599638	109599810	(132593719)	+	L3	LINE/CR1	3312	3508	(591)	2070926
318	13.0	1.8	0.0	chr2	120724622	120724675	(121468854)	C	MSTB1	LTR/ERVL-MaLR	(410)	55	1	2087476
1363	24.3	11.3	3.4	chr2	120724682	120725298	(121468231)	C	L1MC5	LINE/L1	(537)	8767	8335	2087475
3124	28.9	9.7	2.1	chr2	127179505	127180769	(115012760)	+	L1MEd	LINE/L1	157	1537	(5549)	2097008
1396	19.3	5.4	6.5	chr2	127180768	127181200	(115012329)	+	L1MC5	LINE/L1	8689	9116	(188)	2097010
2084	9.3	5.5	1.4	chr2	135325415	135325694	(106867835)	C	AluY	SINE/Alu	(19)	292	1	2108806
1141	26.1	12.4	5.3	chr2	135325695	135326101	(106867428)	+	L1MC5	LINE/L1	8490	8939	(365)	2108802
246	33.0	9.9	3.9	chr2	158984768	158985127	(83208402)	C	L2	LINE/L2	(337)	3082	2699	2140935
288	24.7	2.3	3.4	chr2	158985203	158985290	(83208239)	C	MIRb	SINE/MIR	(64)	204	118	2140936
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
772	29.9	7.2	1.8	chr2	170928043	170928433	(71265096)	C	L1MC5a	LINE/L1	(299)	2478	2065	2157500
666	29.8	5.1	0.4	chr2	190548719	190548981	(51644548)	C	L1ME3B	LINE/L1	(17)	6225	5950	2184517
8428	21.1	6.4	8.6	chr2	190549005	190550133	(51643396)	C	HAL1M8	LINE/L1	(6)	2985	1990	2184518
2891	18.9	6.1	12.3	chr2	200457944	200458887	(41734642)	+	L1MC5	LINE/L1	8221	9102	(202)	2198357
2331	11.4	0.0	0.0	chr2	201188172	201188479	(41005050)	C	AluSz	SINE/Alu	(4)	308	1	2199699
3059	19.5	1.6	10.0	chr2	201188493	201188872	(41004657)	C	L1MC4	LINE/L1	(8)	2983	2618	2199700
2058	21.8	9.2	3.5	chr2	202174895	202175304	(40018225)	C	L1MC5	LINE/L1	(237)	9067	8667	2201363
1601	26.4	8.7	4.9	chr2	202175296	202175398	(40018131)	+	L1ME3Cz	LINE/L1	4574	4678	(1468)	2201360
2355	10.5	0.0	1.3	chr2	219376992	219377305	(22816224)	+	AluSz	SINE/Alu	1	310	(2)	2227825
1588	25.4	12.8	10.9	chr2	219377306	219377604	(22815925)	+	L1MC5a	LINE/L1	2149	2478	(299)	2227822
2039	14.5	0.7	1.6	chr2	219377642	219377951	(22815578)	+	AluJr	SINE/Alu	1	307	(5)	2227826
571	25.6	6.4	11.3	chr2	231182109	231182390	(11011139)	+	MamTip1	DNA/hAT-Tip100	1	267	(0)	2246365
2094	19.5	10.6	3.6	chr2	232958747	232959325	(9234204)	C	L1MC5	LINE/L1	(6)	9298	8675	2249616
1138	29.7	8.2	2.3	chr2	237651106	237651663	(4541866)	C	L1MC5a	LINE/L1	(15)	2762	2169	2256662
906	18.7	5.5	0.9	chr2	237651666	237651892	(4541637)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2387	2256663
1126	31.2	12.5	1.5	chr2	241582097	241582808	(610721)	+	L1MC5a	LINE/L1	1704	2504	(273)	2261375
1966	23.1	0.2	0.1	chr20	60221	63215	(64380952)	+	(ATTCC)n	Simple_repeat	2	3000	(0)	2262201
1966	23.1	0.2	0.1	chr20	63841	67292	(64376875)	+	(ATTCC)n	Simple_repeat	2	3456	(0)	2262202
2960	24.0	11.7	3.9	chr20	4239392	4240511	(60203656)	+	L1MC5	LINE/L1	7915	9151	(153)	2270429
1043	30.2	15.6	2.1	chr20	5531189	5532006	(58912161)	C	L2	LINE/L2	(1992)	1427	479	2272697
3324	23.3	3.6	5.9	chr20	14006303	14007338	(50436829)	C	L1MC5a	LINE/L1	(73)	2704	1694	2285806
1832	21.0	5.3	3.4	chr20	19135514	19136065	(45308102)	C	L1MC5	LINE/L1	(216)	9088	8526	2293722
251	36.3	0.0	0.0	chr20	21048549	21048650	(43395517)	C	MIR	SINE/MIR	(0)	262	161	2296516
1094	29.4	6.0	6.4	chr20	21526304	21527053	(42917114)	C	L1MC5a	LINE/L1	(12)	2765	2019	2297208
1145	23.5	5.8	8.6	chr20	25238614	25238952	(39205215)	+	MLT1A1	LTR/ERVL-MaLR	7	335	(73)	2301883
2553	14.0	5.1	1.7	chr20	25238955	25239367	(39204800)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2301884
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
5848	24.6	4.8	2.3	chr20	30646742	30648304	(33795863)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	28	2305317
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
5624	20.5	6.4	6.2	chr20	37302090	37302915	(27141252)	C	L1MC5a	LINE/L1	(422)	2355	1510	2319700
467	19.6	4.9	2.6	chr20	38460186	38460338	(25983829)	+	L1M5	LINE/L1	2887	3036	(3104)	2322217
416	32.2	6.8	1.0	chr20	38460381	38460587	(25983580)	+	MamGypLTR1a	LTR/Gypsy	555	774	(10)	2322218
1760	22.8	9.0	6.1	chr20	40702525	40703206	(23740961)	+	L1MC5a	LINE/L1	2031	2645	(132)	2326270
2827	1.3	0.0	0.0	chr20	43547103	43547403	(20896764)	C	AluYh3	SINE/Alu	(10)	301	1	2331405
1561	25.9	6.6	10.0	chr20	43547404	43547736	(20896431)	C	L1MC5a	LINE/L1	(487)	2290	2022	2331404
618	21.2	3.7	6.2	chr20	45104064	45104101	(19340066)	+	MIRb	SINE/MIR	21	58	(210)	2335022
1888	21.7	11.1	7.3	chr20	45104102	45104638	(19339529)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	2335023
763	19.9	0.4	0.6	chr20	48516181	48516442	(15927725)	+	D20S16	Satellite	13096	13453	(6)	2342240
254	27.6	6.0	8.4	chr20	48516332	48516485	(15927682)	+	MLT2B4	LTR/ERVL	282	431	(125)	2342258
333	28.1	0.0	4.3	chr20	48516565	48516657	(15927510)	+	D20S16	Satellite	10	98	(0)	2342259
1762	14.3	3.5	0.4	chr20	50974381	50974659	(13469508)	C	AluJo	SINE/Alu	(24)	288	1	2348125
1179	20.0	4.6	11.5	chr20	50974661	50975033	(13469134)	C	L1MC5	LINE/L1	(284)	9020	8675	2348126
464	17.1	2.3	2.3	chr20	50975041	50975128	(13469039)	C	FLAM_A	SINE/Alu	(15)	127	40	2348127
279	28.2	4.5	1.2	chr20	50975131	50975216	(13468951)	+	Arthur1B	DNA/hAT-Tip100	1133	1221	(4)	2348128
2189	13.9	0.0	0.0	chr20	50975228	50975530	(13468637)	C	AluSq2	SINE/Alu	(10)	303	1	2348129
4048	21.7	7.1	6.7	chr20	59112323	59113075	(5331092)	+	L1MC5a	LINE/L1	1863	2601	(176)	2363952
1151	29.1	7.1	0.0	chr20	62435106	62435552	(2008615)	C	L1MB5	LINE/L1	(8)	6166	5686	2368562
984	29.4	4.5	1.7	chr20	62572082	62572617	(1871550)	C	L1MC5	LINE/L1	(10)	2981	2554	2368707
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
125	23.0	0.0	0.7	chr21	7957768	7958048	(38751935)	+	(ACTCC)n	Simple_repeat	1	281	(0)	2373122
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
312	21.5	5.8	0.0	chr21	9248928	9248992	(37460991)	+	AluJb	SINE/Alu	225	293	(19)	2374343
76	18.0	0.0	0.0	chr21	9248994	9249134	(37460849)	+	(AATGG)n	Simple_repeat	1	141	(0)	2374344
2558	6.4	0.9	0.0	chr21	9249136	9249479	(37460504)	+	L1P1	LINE/L1	3726	4072	(2074)	2374345
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
2423	29.9	8.6	4.3	chr21	10440226	10441400	(36268583)	C	L1MDa	LINE/L1	(5406)	1227	4	2375564
365	29.8	3.0	3.7	chr21	15986502	15986637	(30723346)	C	Eulor12	DNA?	(7)	177	43	2379855
2309	11.2	0.3	0.0	chr21	25654367	25654669	(21055314)	+	AluSz	SINE/Alu	1	304	(8)	2392801
1906	25.7	10.4	8.2	chr21	25654670	25655233	(21054750)	+	L1MC5a	LINE/L1	2071	2705	(72)	2392797
2828	25.0	6.9	3.1	chr21	32993937	32994837	(13715146)	+	L1M8	LINE/L1	35	972	(1383)	2404122
1473	26.5	5.5	1.4	chr21	32994941	32995496	(13714487)	+	L1MC5	LINE/L1	8718	9297	(7)	2404123
1181	24.1	9.0	4.4	chr21	43666735	43667211	(3042772)	C	L1MC5a	LINE/L1	(290)	2487	1987	2420597
31	0.0	0.0	0.0	chr21	43667217	43667245	(3042738)	+	(GTTT)n	Simple_repeat	1	29	(0)	2420598
1022	17.1	1.2	0.6	chr21	43667247	43667410	(3042573)	C	AluJr	SINE/Alu	(30)	282	118	2420599
1703	22.1	7.9	2.5	chr21	45337452	45337892	(1372091)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2422755
2366	10.9	0.0	0.3	chr21	45337924	45338234	(1371749)	+	AluSq2	SINE/Alu	3	312	(1)	2422756
301	22.8	6.5	10.6	chr21	45607774	45607886	(1102097)	+	L1MA10	LINE/L1	6227	6334	(0)	2422993
14	19.8	0.0	4.5	chr21	45608133	45608176	(1101807)	+	(GCTCC)n	Simple_repeat	1	44	(0)	2422994
2295	28.5	3.0	3.9	chr21	45608232	45609070	(1100913)	C	L1ME2	LINE/L1	(0)	6164	5334	2422995
13	4.1	8.0	0.0	chr21	46325382	46325406	(384577)	+	(GGAG)n	Simple_repeat	1	27	(0)	2423814
487	26.0	6.1	1.9	chr22	11309822	11309978	(39508490)	C	MIRb	SINE/MIR	(72)	196	33	2425024
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
643	22.0	0.5	0.4	chr22	11616898	11617618	(39200850)	+	(TCTC)n	Simple_repeat	2	722	(0)	2425261
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
302	19.6	1.8	0.0	chr22	11916982	11917037	(38901431)	+	MSTA-int	LTR/ERVL-MaLR	959	1015	(616)	2425531
978	18.8	15.3	2.7	chr22	11916991	11917268	(38901200)	C	THE1D-int	LTR/ERVL-MaLR	(407)	1224	907	2425532
1077	23.8	4.3	1.8	chr22	11917289	11917562	(38900906)	+	MSTA	LTR/ERVL-MaLR	96	376	(52)	2425533
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
4275	15.6	2.5	1.5	chr22	12204382	12205168	(38613300)	+	L1P4	LINE/L1	4058	4852	(1294)	2425815
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
503	29.2	7.8	4.6	chr22	18076335	18076563	(32741905)	C	MIRc	SINE/MIR	(14)	254	12	2430181
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1153	11.0	0.7	0.0	chr22	20338381	20338535	(30479933)	+	AluYm1	SINE/Alu	13	168	(143)	2433146
51	2.3	11.4	0.0	chr22	20338573	20338660	(30479808)	+	(AT)n	Simple_repeat	1	98	(0)	2433147
213	35.8	10.6	1.0	chr22	27619597	27619791	(23198677)	C	L2	LINE/L2	(1056)	2363	2148	2447123
1022	21.3	4.3	12.8	chr22	29523313	29523774	(21294694)	+	L1MC5	LINE/L1	8537	8957	(347)	2450761
2107	13.8	0.6	0.3	chr22	30708819	30709130	(20109338)	+	AluSq2	SINE/Alu	1	313	(0)	2453226
2071	18.9	9.9	9.3	chr22	30709131	30709500	(20108968)	C	L1MC5	LINE/L1	(242)	9062	8531	2453224
28	0.0	0.0	3.2	chr22	30709501	30709531	(20108937)	+	(TTGTTTT)n	Simple_repeat	1	31	(0)	2453227
1462	15.7	2.1	8.5	chr22	30709532	30709836	(20108632)	C	AluSz6	SINE/Alu	(27)	285	1	2453228
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
14	22.6	3.8	1.8	chr22	41621544	41621596	(9196872)	+	(CGCCTG)n	Simple_repeat	1	55	(0)	2476344
2178	9.2	4.1	0.0	chr22	43033554	43033834	(7784634)	+	AluSg4	SINE/Alu	1	293	(17)	2479425
2211	10.3	2.2	1.9	chr22	43034270	43034403	(7784065)	+	AluSz	SINE/Alu	2	134	(178)	2479426
2143	9.0	2.4	1.7	chr22	44684261	44684549	(6133919)	+	AluSx	SINE/Alu	1	291	(21)	2482425
392	30.9	5.7	0.7	chr22	44685008	44685157	(6133311)	+	MIRb	SINE/MIR	21	178	(90)	2482426
3732	24.4	7.2	4.5	chr22	45572154	45572944	(5245524)	+	L1MC5	LINE/L1	8052	8857	(447)	2484174
2227	12.3	0.7	0.7	chr22	45572945	45573224	(5245244)	+	AluSx	SINE/Alu	1	282	(30)	2484183
380	25.4	5.1	0.8	chr3	4976236	4976366	(193319193)	+	MER91C	DNA/hAT-Tip100	1	137	(3)	2499889
392	26.2	7.6	4.3	chr3	4976371	4976538	(193319021)	+	MIRb	SINE/MIR	16	191	(17)	2499890
2121	14.6	0.7	0.0	chr3	9624140	9624440	(188671119)	C	AluSz	SINE/Alu	(9)	303	1	2507609
1804	25.0	4.4	7.0	chr3	9624441	9624700	(188670859)	C	L1MC5a	LINE/L1	(453)	2324	2067	2507608
484	19.1	1.2	0.0	chr3	9624843	9624926	(188670633)	C	AluSz	SINE/Alu	(222)	90	6	2507610
1788	17.1	4.3	0.0	chr3	11123110	11123395	(187172164)	+	AluJr4	SINE/Alu	1	299	(13)	2510789
3044	20.5	4.9	5.3	chr3	11123396	11123517	(187172042)	C	L1MC5	LINE/L1	(491)	8813	8698	2510788
1341	22.1	0.6	3.0	chr3	11123518	11123849	(187171710)	+	MER33	DNA/hAT-Charlie	1	324	(0)	2510790
685	24.2	1.8	0.0	chr3	15913712	15913872	(182381687)	+	L1MC5	LINE/L1	8624	8787	(517)	2519608
707	17.6	6.5	4.8	chr3	15913876	15913956	(182381603)	+	MLT1B	LTR/ERVL-MaLR	3	90	(300)	2519609
1958	13.5	11.7	5.7	chr3	15913957	15914357	(182381202)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2519610
227	31.6	17.8	1.8	chr3	23117388	23117795	(175177764)	+	L2c	LINE/L2	2855	3344	(43)	2529683
2268	23.0	13.9	3.1	chr3	23177372	23178152	(175117407)	C	L1MC5	LINE/L1	(104)	9200	8322	2529787
5036	13.2	2.2	4.7	chr3	34824105	34824963	(163470596)	+	LTR1A2	LTR/ERV1	1	837	(0)	2547896
1156	24.1	11.5	5.9	chr3	42599706	42600191	(155695368)	+	L1M5	LINE/L1	4897	5394	(752)	2559371
1175	26.1	9.3	12.7	chr3	45863037	45864041	(152431518)	+	L1MC5a	LINE/L1	1633	2599	(178)	2564566
593	22.1	0.8	0.8	chr3	45960868	45960990	(152334569)	C	MER5B	DNA/hAT-Charlie	(55)	123	1	2564709
1780	20.5	7.3	3.5	chr3	45960994	45961299	(152334260)	+	L1MC5	LINE/L1	8833	9064	(240)	2564710
489	21.8	4.7	2.1	chr3	46488743	46488887	(151806672)	+	LTR41B	LTR/ERVL	19	167	(591)	2565464
377	26.0	16.2	1.0	chr3	46489221	46489418	(151806141)	+	LTR41B	LTR/ERVL	444	677	(81)	2565464
2193	24.3	5.6	0.7	chr3	49559247	49559859	(148735700)	C	L1MC5	LINE/L1	(4)	9300	8656	2571624
180	21.7	6.1	4.2	chr3	53759088	53759135	(144536424)	+	AmnSINE1	SINE/5S-Deu-L2	290	338	(237)	2578051
264	28.5	12.7	4.9	chr3	53759271	53759473	(144536086)	C	L2c	LINE/L2	(1635)	1784	1564	2578050
1393	19.4	16.8	2.1	chr3	72408727	72409111	(125886448)	+	MSTB2	LTR/ERVL-MaLR	3	455	(2)	2609093
2956	21.5	8.5	2.5	chr3	72530408	72531423	(125764136)	+	L1MC5	LINE/L1	8013	8799	(505)	2609359
2175	15.7	0.0	2.6	chr3	82624139	82624485	(115671074)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	2623622
697	29.1	9.3	4.9	chr3	82624486	82624887	(115670672)	C	L1MC5a	LINE/L1	(301)	2476	2043	2623621
17	4.9	0.0	0.0	chr3	82624888	82624908	(115670651)	+	(T)n	Simple_repeat	1	21	(0)	2623623
553	15.6	1.0	0.0	chr3	82624912	82625007	(115670552)	C	L1PB4	LINE/L1	(2)	6154	6058	2623624
26	0.0	0.0	0.0	chr3	89113486	89113513	(109182046)	+	(A)n	Simple_repeat	1	28	(0)	2631627
1195	24.0	9.8	5.2	chr3	106419792	106420313	(91875246)	C	L1MC5	LINE/L1	(201)	9103	8555	2649496
22446	11.6	2.0	1.4	chr3	111372807	111379385	(86916174)	+	L1PB1	LINE/L1	253	6863	(4)	2656453
696	21.9	4.8	6.7	chr3	127230878	127231087	(71064472)	+	MER3	DNA/hAT-Charlie	1	206	(3)	2679720
1609	25.9	9.0	3.5	chr3	127231088	127231419	(71064140)	+	L1MC5a	LINE/L1	2172	2532	(245)	2679719
3877	19.4	7.6	1.5	chr3	135073340	135074316	(63221243)	C	L1MC5	LINE/L1	(4)	9300	8260	2692358
35	15.0	4.2	4.0	chr3	141486916	141487011	(56808548)	+	G-rich	Low_complexity	1	100	(0)	2702372
2686	4.5	0.0	0.3	chr3	141801029	141801338	(56494221)	+	AluY	SINE/Alu	1	309	(2)	2702875
1504	19.6	11.0	9.7	chr3	141801339	141801892	(56493667)	+	L1MC5	LINE/L1	8728	9291	(13)	2702874
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
798	26.7	4.9	7.5	chr3	152325848	152326223	(45969336)	C	L1MC5a	LINE/L1	(18)	2759	2394	2718038
1216	23.5	7.9	2.6	chr3	152326217	152326684	(45968875)	C	L1MC5a	LINE/L1	(538)	2239	1745	2718038
469	34.9	1.7	1.7	chr3	168904666	168904837	(29390722)	+	MIR3	SINE/MIR	21	192	(16)	2740680
1279	24.4	17.9	3.1	chr3	172305008	172305650	(25989909)	C	L1MC5	LINE/L1	(4)	9300	8542	2745896
212	25.0	1.8	1.8	chr4	5634712	5634768	(184579787)	C	MIR3	SINE/MIR	(48)	160	104	2796870
462	29.0	8.7	3.5	chr4	5634789	5635017	(184579538)	C	MER102c	DNA/hAT-Charlie	(24)	307	66	2796871
1903	12.4	0.0	0.0	chr4	5635030	5635312	(184579243)	C	AluSx1	SINE/Alu	(0)	312	25	2796872
285	21.2	4.3	0.0	chr4	16062843	16062908	(174151647)	+	L1ME4a	LINE/L1	5847	5915	(209)	2813732
2492	23.5	5.6	5.1	chr4	16062978	16063315	(174151240)	+	L1MC5	LINE/L1	8536	8873	(431)	2813733
2127	11.5	0.7	0.0	chr4	16063316	16063603	(174150952)	+	AluSz	SINE/Alu	1	290	(22)	2813734
1877	24.9	4.8	7.2	chr4	38312246	38312915	(151901640)	+	L1MC5a	LINE/L1	2119	2771	(6)	2847567
1697	22.1	6.7	3.9	chr4	40150175	40150384	(150064171)	+	L1MC5	LINE/L1	8590	8796	(508)	2851379
2059	14.1	0.0	1.3	chr4	40150385	40150688	(150063867)	+	AluSz	SINE/Alu	1	300	(12)	2851380
1697	22.1	6.7	3.9	chr4	40150689	40151015	(150063540)	+	L1MC5	LINE/L1	8797	9143	(161)	2851379
2331	25.0	5.6	1.9	chr4	42745471	42746212	(147468343)	+	L1MC5	LINE/L1	8387	9157	(147)	2856030
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
3546	28.2	8.2	5.8	chr4	54520731	54522730	(135691825)	+	L1MC5	LINE/L1	6832	8892	(412)	2869448
275	29.4	11.3	0.0	chr4	54522740	54522841	(135691714)	+	L1ME3B	LINE/L1	5934	6048	(194)	2869450
590	15.1	5.8	2.6	chr4	54522846	54522961	(135691594)	+	MLT1B	LTR/ERVL-MaLR	3	122	(268)	2869451
201	30.2	1.0	1.0	chr4	56922613	56922709	(133291846)	C	MIR	SINE/MIR	(50)	212	116	2873638
440	26.3	3.6	0.8	chr4	56922710	56922843	(133291712)	C	L1MC5a	LINE/L1	(480)	2297	2160	2873639
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
18	26.4	0.0	7.9	chr4	84966648	84966680	(105247875)	+	(TCC)n	Simple_repeat	1	43	(46)	2911910
13	9.3	0.0	0.0	chr4	84966681	84966703	(105247852)	+	(CTGA)n	Simple_repeat	1	23	(0)	2911911
18	26.4	0.0	7.9	chr4	84966704	84966736	(105247819)	+	(TCC)n	Simple_repeat	44	89	(0)	2911910
19	13.0	2.2	4.3	chr4	84966775	84966782	(105247773)	+	(CCTT)n	Simple_repeat	1	46	(0)	2911912
13	12.6	5.4	2.6	chr4	84966783	84966819	(105247736)	+	(CCTTT)n	Simple_repeat	1	39	(0)	2911913
13	29.0	1.5	4.3	chr4	84966951	84967018	(105247537)	+	(CTCCT)n	Simple_repeat	1	69	(0)	2911914
18	0.0	0.0	0.0	chr4	98929300	98929319	(91285236)	+	(T)n	Simple_repeat	1	20	(0)	2930946
5682	23.6	9.8	8.9	chr4	107234004	107234600	(82979955)	C	L1MC5	LINE/L1	(18)	9286	8659	2941815
1688	18.5	0.0	3.6	chr4	107234601	107234902	(82979653)	+	AluJb	SINE/Alu	1	291	(21)	2941816
3715	23.1	7.2	5.9	chr4	152042556	152043791	(38170764)	+	L1MC5	LINE/L1	8039	9292	(12)	3002368
12	0.0	8.0	3.7	chr4	152194467	152194491	(38020064)	+	(TTGTT)n	Simple_repeat	1	27	(0)	3002599
1127	21.0	5.8	11.4	chr4	152194568	152195023	(38019532)	+	L1MC5	LINE/L1	8689	9117	(187)	3002600
15	22.3	0.0	2.3	chr4	156971179	156971222	(33243333)	+	G-rich	Low_complexity	1	44	(0)	3009493
3404	16.6	10.5	0.6	chr4	158744107	158744743	(31469812)	C	MER39	LTR/ERV1	(0)	707	1	3011835
3020	28.6	7.0	5.4	chr4	158744744	158744779	(31469776)	C	L2a	LINE/L2	(1453)	1966	1931	3011833
1810	21.2	6.6	9.7	chr4	158744783	158745173	(31469382)	+	L1MC5a	LINE/L1	2159	2571	(206)	3011836
45	0.0	0.0	0.0	chr4	158745174	158745214	(31469341)	+	(TATT)n	Simple_repeat	1	41	(0)	3011837
2473	7.4	0.0	0.3	chr4	158745215	158745498	(31469057)	C	AluY	SINE/Alu	(28)	283	1	3011838
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
1938	14.0	3.4	0.3	chr4	177465763	177466048	(12748507)	+	AluSx1	SINE/Alu	3	297	(15)	3036975
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
289	30.2	7.5	3.4	chr5	1124912	1125089	(180413170)	+	L1M4	LINE/L1	2988	3173	(3471)	3055955
31	0.0	0.0	0.0	chr5	1125269	1125295	(180412964)	+	(GT)n	Simple_repeat	1	27	(0)	3055956
181	31.7	11.1	3.2	chr5	14154524	14154647	(167383612)	C	MamRTE1	LINE/RTE-BovB	(3530)	282	148	3071871
317	28.2	4.1	0.0	chr5	17343631	17343747	(164194512)	C	L2c	LINE/L2	(703)	2716	2595	3076666
13	24.6	2.3	0.0	chr5	17344030	17344072	(164194187)	+	(GTGTCT)n	Simple_repeat	1	44	(0)	3076674
2459	8.2	0.0	0.0	chr5	34440233	34440538	(147097721)	+	AluY	SINE/Alu	1	306	(5)	3099795
38	2.5	0.0	0.0	chr5	43611075	43611114	(137927145)	+	(CCTC)n	Simple_repeat	1	40	(0)	3113355
869	21.1	9.5	10.0	chr5	43611115	43611346	(137926913)	C	L1MC5a	LINE/L1	(353)	2424	2184	3113354
575	20.0	0.0	0.0	chr5	43611337	43611436	(137926823)	C	L1MC5a	LINE/L1	(1150)	1627	1528	3113354
13	17.8	5.3	0.0	chr5	56816853	56816890	(124721369)	+	(TTTGGAA)n	Simple_repeat	1	40	(0)	3125611
657	21.6	3.0	0.6	chr5	56908641	56908803	(124629456)	+	L1MC	LINE/L1	3613	3779	(2367)	3125751
370	16.7	0.0	0.0	chr5	56908875	56908946	(124629313)	+	L1MA10	LINE/L1	6256	6327	(7)	3125752
459	26.3	10.9	0.6	chr5	61101223	61101402	(120436857)	C	L1ME3B	LINE/L1	(106)	6136	5936	3131769
838	22.9	3.4	0.5	chr5	61101416	61101617	(120436642)	C	HAL1M8	LINE/L1	(4)	2987	2780	3131770
2622	27.0	5.7	2.4	chr5	61101714	61101913	(120436346)	+	L1M5	LINE/L1	4377	4575	(1571)	3131771
13	9.3	0.0	0.0	chr5	61334774	61334796	(120203463)	+	(TTTG)n	Simple_repeat	1	23	(0)	3132111
4418	19.6	8.9	0.4	chr5	66641457	66642570	(114895689)	+	L1MC5	LINE/L1	7911	9128	(176)	3139742
2541	24.3	8.0	2.9	chr5	72102900	72104091	(109434168)	+	L1MC5a	LINE/L1	1027	2940	(51)	3148498
313	17.9	11.4	0.0	chr5	72104089	72104166	(109434093)	+	L1MC5a	LINE/L1	9217	9304	(0)	3148498
2127	24.6	14.1	1.4	chr5	72306033	72306940	(109231319)	+	L1MC5	LINE/L1	8238	9266	(38)	3148778
27517	3.6	0.3	0.1	chr5	77608676	77614811	(103923448)	+	L1PA3	LINE/L1	12	6155	(0)	3156893
234	21.9	16.6	5.2	chr5	77614835	77614988	(103923271)	+	L1MC5a	LINE/L1	2201	2375	(402)	3156891
687	24.5	3.1	1.1	chr5	77614980	77615169	(103923090)	+	L1MB8	LINE/L1	5924	6117	(61)	3156894
764	26.8	12.5	1.4	chr5	77615204	77615551	(103922708)	+	L1MC5a	LINE/L1	2379	2770	(7)	3156891
2141	11.0	0.3	3.3	chr5	80817929	80818227	(100720032)	+	AluSx1	SINE/Alu	2	291	(21)	3162253
2792	22.2	8.3	7.0	chr5	80818228	80818884	(100719375)	+	L1MC5	LINE/L1	8676	9286	(18)	3162252
509	17.2	0.0	2.2	chr5	89663085	89663173	(91875086)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	386	3173839
322	22.7	0.0	0.0	chr5	89663176	89663241	(91875018)	C	MER47C	DNA/TcMar-Tigger	(31)	66	1	3173840
3885	25.1	6.3	6.3	chr5	89663243	89664695	(91873564)	C	HAL1M8	LINE/L1	(64)	2927	1476	3173841
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
1847	26.8	6.8	2.1	chr5	115200342	115200734	(66337525)	C	L1MC5a	LINE/L1	(163)	2614	2186	3206435
1252	12.7	10.9	0.0	chr5	115200735	115200939	(66337320)	+	MER30	DNA/hAT-Charlie	1	230	(0)	3206437
1847	27.0	6.6	2.1	chr5	115200940	115201337	(66336922)	C	L1MC5a	LINE/L1	(592)	2185	1805	3206435
2327	20.5	5.9	0.8	chr5	122735044	122735555	(58802704)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	1	3216331
1403	24.3	8.5	5.7	chr5	122735556	122736184	(58802075)	+	L1MC5a	LINE/L1	2098	2745	(32)	3216330
450	24.3	9.6	0.0	chr5	141092331	141092484	(40445775)	+	L1MC5a	LINE/L1	2182	2296	(481)	3243628
1816	23.0	4.2	6.2	chr5	149866306	149866939	(31671320)	+	L1MC5a	LINE/L1	2116	2736	(41)	3258707
1330	25.3	7.4	1.0	chr5	150667807	150668221	(30870038)	C	L1MC5a	LINE/L1	(143)	2634	2191	3260480
388	32.9	5.4	3.9	chr5	150668203	150668566	(30869693)	+	L2-3_Crp	LINE/L2	717	1086	(1010)	3260481
1797	16.8	1.7	1.3	chr5	151290984	151291281	(30246978)	C	AluJr	SINE/Alu	(13)	299	1	3261592
2033	23.1	5.1	10.9	chr5	151291282	151291837	(30246422)	C	L1MC5a	LINE/L1	(284)	2493	1940	3261590
2623	5.2	0.0	0.3	chr5	154693574	154693880	(26844379)	+	AluY	SINE/Alu	1	306	(5)	3267804
1382	26.9	5.2	4.7	chr5	154693893	154694241	(26844018)	+	L1MC5a	LINE/L1	2083	2428	(349)	3267805
3815	23.1	5.7	4.4	chr5	157177689	157177874	(24360385)	C	L1MC5a	LINE/L1	(271)	2506	2313	3272217
1902	16.2	2.9	0.0	chr5	157177875	157178176	(24360083)	C	AluJb	SINE/Alu	(1)	311	1	3272219
3815	23.1	5.7	4.4	chr5	157178177	157178910	(24359349)	C	L1MC5a	LINE/L1	(465)	2312	1573	3272217
3482	19.5	5.7	1.6	chr5	170844186	170845023	(10693236)	C	L1MB8	LINE/L1	(0)	6178	5304	3294397
1869	23.1	4.4	9.4	chr5	172747380	172748009	(8790250)	C	L1MC5	LINE/L1	(320)	8984	8388	3298111
368	28.4	12.9	4.0	chr5	174204577	174204752	(7333507)	C	MIRc	SINE/MIR	(56)	212	19	3301073
1278	21.9	11.4	9.0	chr5	175604670	175605029	(5933230)	+	L1MC5	LINE/L1	8534	8927	(377)	3303739
1044	20.0	0.4	4.1	chr5	175605030	175605274	(5932985)	+	MER106A	DNA/hAT-Charlie	1	236	(0)	3303740
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
3363	17.4	4.6	2.5	chr6	492205	492934	(170313045)	+	L1MB8	LINE/L1	5433	6178	(0)	3314878
2306	22.2	10.7	9.6	chr6	517291	518393	(170287586)	+	L1MC5	LINE/L1	8180	9295	(9)	3314905
316	18.3	0.0	0.0	chr6	2329869	2329928	(168476051)	+	L1MC5	LINE/L1	8707	8766	(538)	3317268
13	20.1	7.8	0.0	chr6	2983798	2983848	(167822131)	+	(GAGAACA)n	Simple_repeat	1	55	(0)	3318202
3710	18.9	6.8	9.0	chr6	5716437	5717350	(165088629)	C	MER21A	LTR/ERVL	(26)	905	13	3322443
46	0.0	0.0	0.0	chr6	5717352	5717390	(165088589)	+	(TG)n	Simple_repeat	1	39	(0)	3322444
1461	22.1	7.8	3.4	chr6	5717417	5717795	(165088184)	C	L1MC5a	LINE/L1	(462)	2315	1919	3322445
13	13.1	0.0	0.0	chr6	7726157	7726181	(163079798)	+	(CCG)n	Simple_repeat	1	25	(0)	3325635
2582	24.0	5.5	3.1	chr6	12685572	12686385	(158119594)	+	L1MC5	LINE/L1	8056	8890	(414)	3333047
232	21.3	2.6	2.6	chr6	12686405	12686481	(158119498)	+	L1ME3B	LINE/L1	5940	6016	(226)	3333048
4805	22.5	5.2	4.2	chr6	13518866	13519850	(157286129)	+	L1MC5a	LINE/L1	1336	2365	(412)	3334410
1862	17.4	5.6	3.4	chr6	13519851	13520231	(157285748)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3334411
357	33.8	11.1	4.0	chr6	13700343	13700660	(157105319)	+	L2b	LINE/L2	2925	3267	(120)	3334717
3927	19.6	8.4	8.1	chr6	16194492	16195334	(154610645)	+	L1MC5	LINE/L1	8017	8882	(422)	3339132
763	16.8	3.1	0.0	chr6	16195335	16195459	(154610520)	+	AluJr4	SINE/Alu	5	133	(179)	3339133
1813	25.4	6.7	5.5	chr6	20811418	20811824	(149994155)	C	L1MC5a	LINE/L1	(415)	2362	1944	3346659
1262	15.7	8.8	0.9	chr6	27836797	27837025	(142968954)	C	AluJo	SINE/Alu	(27)	285	37	3357679
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
18	7.0	0.0	5.9	chr6	34236747	34236780	(136569199)	+	(GCG)n	Simple_repeat	1	34	(0)	3367935
1618	21.4	5.3	1.8	chr6	34473710	34474224	(136331755)	C	L1MC5	LINE/L1	(1)	9303	8696	3368483
1140	24.7	12.9	2.7	chr6	34474226	34474507	(136331472)	+	L2a	LINE/L2	2579	2890	(529)	3368484
996	19.4	0.5	0.5	chr6	36748657	36748868	(134057111)	+	L1MC5	LINE/L1	8590	8801	(503)	3373205
277	23.7	9.2	5.6	chr6	36748882	36748944	(134057035)	+	MER5A	DNA/hAT-Charlie	30	100	(89)	3373206
1883	17.9	0.3	0.0	chr6	36748945	36749234	(134056745)	C	AluJb	SINE/Alu	(20)	292	2	3373207
758	21.4	2.5	5.4	chr6	40707038	40707300	(130098679)	+	L1MC5	LINE/L1	8476	8668	(636)	3379956
33	25.6	0.0	0.0	chr6	40707311	40707392	(130098587)	+	GA-rich	Low_complexity	1	82	(0)	3379957
1009	23.1	2.9	1.1	chr6	40707393	40707668	(130098311)	+	L1MC5	LINE/L1	8673	8953	(351)	3379956
13	20.6	2.6	0.0	chr6	42454061	42454099	(128351880)	+	(TGTCCTC)n	Simple_repeat	1	40	(0)	3383280
1847	24.0	7.1	6.1	chr6	42711969	42712593	(128093386)	+	L1MC5a	LINE/L1	2070	2701	(76)	3383838
4268	22.3	9.2	5.2	chr6	44795735	44797214	(126008765)	C	L1MC5a	LINE/L1	(176)	2601	1264	3387769
222	32.7	19.1	1.6	chr6	73765235	73765781	(97040198)	C	L2b	LINE/L2	(685)	2734	2070	3424194
1044	22.9	14.8	4.2	chr6	88335167	88335712	(82470267)	+	L1MC5	LINE/L1	8535	9148	(156)	3443009
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2853	27.3	12.8	2.9	chr6	121077025	121078224	(49727755)	+	L2	LINE/L2	718	2053	(1366)	3488531
1144	28.8	9.8	2.4	chr6	121339355	121339908	(49466071)	C	L1MC5a	LINE/L1	(11)	2766	2167	3488818
578	24.9	8.3	1.2	chr6	121339913	121340079	(49465900)	+	MER45R	DNA/hAT-Tip100	5	184	(1397)	3488819
547	31.6	11.6	2.7	chr6	125024766	125025204	(45780775)	C	L2c	LINE/L2	(943)	2476	1994	3493734
1869	15.1	0.3	5.2	chr6	133699520	133699843	(37106136)	+	AluJr	SINE/Alu	2	309	(3)	3505579
1226	22.1	5.9	6.4	chr6	133699844	133700010	(37105969)	+	HAL1M8	LINE/L1	2799	2962	(29)	3505578
256	33.3	16.0	0.7	chr6	133700075	133700222	(37105757)	+	MLT1N2	LTR/ERVL-MaLR	16	190	(372)	3505580
37	0.0	0.0	0.0	chr6	135180404	135180437	(35625542)	+	(T)n	Simple_repeat	1	34	(0)	3508087
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
28	19.6	2.0	6.9	chr6	151391701	151391800	(19414179)	+	(GCC)n	Simple_repeat	1	102	(0)	3531915
894	25.1	12.6	5.2	chr6	152023306	152023846	(18782133)	C	L1MC5a	LINE/L1	(16)	2761	2175	3532961
319	26.5	1.2	0.0	chr6	152023855	152023937	(18782042)	+	MER58A	DNA/hAT-Charlie	1	84	(140)	3532962
545	36.5	4.2	0.6	chr6	152023970	152024608	(18781371)	C	L1M8	LINE/L1	(1069)	5145	4483	3532963
1761	24.8	9.2	4.1	chr6	156560295	156560587	(14245392)	+	MER119	DNA/hAT-Charlie	242	566	(17)	3539631
1653	21.4	11.7	3.3	chr6	156560588	156561132	(14244847)	+	L1MC5	LINE/L1	8639	9235	(69)	3539633
376	22.5	17.4	2.4	chr6	158744933	158745121	(12060858)	C	MIRb	SINE/MIR	(28)	240	3	3543062
1879	7.0	0.0	0.0	chr6	166222212	166222438	(4583541)	C	AluSc8	SINE/Alu	(48)	263	37	3552958
15	22.5	1.8	3.6	chr6	166956925	166956979	(3849000)	+	(CACCCCG)n	Simple_repeat	1	56	(0)	3553813
603	27.9	22.5	3.9	chr7	1136724	1137242	(158208731)	+	L2a	LINE/L2	2433	3076	(343)	3559350
430	27.5	12.8	3.2	chr7	1137252	1137469	(158208504)	+	L2a	LINE/L2	3185	3426	(0)	3559350
3138	22.6	3.4	9.1	chr7	3154686	3155244	(156190729)	+	L1MC5	LINE/L1	8236	8786	(518)	3562776
1807	14.5	0.0	0.0	chr7	3155245	3155506	(156190467)	+	AluJr	SINE/Alu	21	282	(30)	3562777
2378	8.3	0.0	1.0	chr7	5648444	5648757	(153697216)	+	AluY	SINE/Alu	1	311	(0)	3567532
621	24.0	39.4	9.0	chr7	5648758	5649075	(153696898)	+	L1MC5a	LINE/L1	2198	2626	(151)	3567530
1962	10.9	3.5	3.2	chr7	5649100	5649410	(153696563)	+	AluSx1	SINE/Alu	1	312	(0)	3567533
179	0.0	3.4	0.0	chr7	6577112	6577287	(152768686)	+	(ATAAA)n	Simple_repeat	1	182	(0)	3569724
18	19.9	2.2	0.0	chr7	6730018	6730063	(152615910)	+	(GGCGGA)n	Simple_repeat	1	47	(0)	3570020
3579	22.5	11.5	3.4	chr7	22352427	22353603	(136992370)	+	L1MC5a	LINE/L1	1444	2728	(49)	3590522
597	27.7	14.8	4.0	chr7	30996878	30997344	(128348629)	+	L2a	LINE/L2	2856	3422	(4)	3603982
986	27.8	9.4	5.2	chr7	40036607	40037183	(119308790)	C	L1MC5a	LINE/L1	(40)	2737	2134	3617650
1841	22.6	6.9	1.4	chr7	40037225	40037659	(119308314)	C	MLT1F	LTR/ERVL-MaLR	(83)	465	5	3617651
20	20.5	1.4	5.6	chr7	44276091	44276160	(115069813)	+	G-rich	Low_complexity	1	71	(0)	3624015
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
315	21.0	3.1	0.0	chr7	57490047	57490108	(101855865)	+	AluYj4	SINE/Alu	226	289	(22)	3642537
347	18.2	0.0	0.0	chr7	57495188	57495242	(101850731)	+	AluYj4	SINE/Alu	225	279	(32)	3642545
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
2926	23.9	7.0	4.6	chr7	70714182	70715199	(88630774)	C	L1MC5a	LINE/L1	(9)	2768	1725	3658728
13	25.0	2.0	2.0	chr7	76397687	76397735	(82948238)	+	(CCCGCAG)n	Simple_repeat	1	50	(0)	3672048
3897	22.6	16.3	4.4	chr7	91180837	91182523	(68163450)	C	L1MC5	LINE/L1	(12)	9292	7366	3692124
1825	18.3	2.4	5.0	chr7	101367695	101367907	(57978066)	+	MLT1A	LTR/ERVL-MaLR	159	370	(4)	3708625
959	25.1	5.2	7.1	chr7	101367968	101368321	(57977652)	C	L1MC5	LINE/L1	(438)	8866	8526	3708627
2981	14.9	1.6	0.6	chr7	101368322	101368801	(57977172)	C	MER66B	LTR/ERV1	(1)	485	1	3708628
4783	16.4	3.3	2.7	chr7	106728116	106729963	(52616010)	+	L1MB8	LINE/L1	4309	6166	(12)	3717968
32	21.1	0.0	1.4	chr7	114867375	114867443	(44478530)	+	(AC)n	Simple_repeat	1	69	(0)	3728955
2810	19.4	6.0	8.6	chr7	129287842	129288364	(30057609)	C	L1MC5	LINE/L1	(72)	9232	8677	3748881
2292	9.9	1.3	0.0	chr7	129288365	129288658	(30057315)	C	AluSx1	SINE/Alu	(13)	299	2	3748882
881	28.9	2.8	2.0	chr7	132595850	132596245	(26749728)	C	L1MC5a	LINE/L1	(178)	2599	2201	3754631
631	26.2	10.2	0.9	chr7	134236130	134236360	(25109613)	C	L1ME3B	LINE/L1	(53)	6189	5935	3757159
3194	24.4	7.8	11.6	chr7	134236369	134237046	(25108927)	C	L1MC5a	LINE/L1	(300)	2691	1767	3757160
838	24.6	3.9	0.8	chr7	139778909	139779158	(19566815)	+	MER112	DNA/hAT-Charlie	1	258	(3)	3766166
857	26.9	6.1	13.6	chr7	141376133	141376659	(17969314)	+	L1MC5a	LINE/L1	1787	2254	(523)	3769191
416	11.1	6.5	0.0	chr7	141376660	141376731	(17969242)	+	MADE1	DNA/TcMar-Mariner	2	78	(2)	3769192
857	26.9	6.1	13.6	chr7	141376732	141376848	(17969125)	+	L1MC5a	LINE/L1	2255	2379	(398)	3769191
1770	24.8	4.8	1.7	chr7	149199672	149200250	(10145723)	C	L1MC5	LINE/L1	(11)	9293	8696	3780273
181	22.5	4.8	0.0	chr7	149200251	149200290	(10145683)	+	L2a	LINE/L2	1931	1972	(1447)	3780272
286	28.9	2.4	0.8	chr7	149200325	149200446	(10145527)	+	L2-3_Crp	LINE/L2	840	963	(1133)	3780274
2355	24.2	7.4	7.8	chr7	149200447	149200583	(10145390)	+	L2a	LINE/L2	2167	2308	(1111)	3780272
332	33.0	4.3	2.9	chr7	150204498	150204703	(9141270)	+	LTR78	LTR/ERV1	737	945	(359)	3781697
263	27.9	4.9	4.9	chr7	150204953	150205095	(9140878)	+	LTR78	LTR/ERV1	970	1112	(192)	3781697
2099	11.5	1.0	0.3	chr7	157391822	157392117	(1953856)	+	AluJb	SINE/Alu	3	300	(12)	3792426
19	14.2	0.0	0.0	chr7	157392360	157392390	(1953583)	+	(T)n	Simple_repeat	1	31	(0)	3792427
2394	10.3	11.7	0.5	chr7	158594718	158595097	(750876)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3793407
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
471	21.9	0.0	3.5	chr8	11143250	11143363	(133995273)	+	7SLRNA	srpRNA	211	320	(0)	3809150
467	26.3	0.0	0.8	chr8	11143364	11143482	(133995154)	+	HAL1M8	LINE/L1	2733	2850	(141)	3809143
398	27.6	4.7	3.5	chr8	11143555	11143723	(133994913)	+	L1ME3B	LINE/L1	5929	6099	(143)	3809151
306	29.2	9.2	5.0	chr8	22114154	22114456	(123024180)	+	L1ME4c	LINE/L1	513	829	(1)	3825605
1245	24.5	11.9	2.8	chr8	41918933	41919426	(103219210)	C	L1MC5a	LINE/L1	(204)	2573	2115	3857834
789	24.2	12.6	2.7	chr8	41919426	41919451	(103219185)	C	L1ME3B	LINE/L1	(3203)	3116	3092	3857830
2231	9.6	2.7	0.0	chr8	41919452	41919744	(103218892)	C	AluSc	SINE/Alu	(6)	303	3	3857836
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
15	13.9	0.0	0.0	chr8	59119453	59119476	(86019160)	+	(G)n	Simple_repeat	1	24	(0)	3877492
14	9.5	8.8	0.0	chr8	59119598	59119631	(86019005)	+	GA-rich	Low_complexity	1	37	(0)	3877493
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
2228	17.6	2.9	5.7	chr8	85769394	85769806	(59368830)	+	L1MA8	LINE/L1	5887	6286	(5)	3914995
12	12.0	3.7	0.0	chr8	94474885	94474911	(50663725)	+	(CCTC)n	Simple_repeat	1	28	(0)	3926895
14	13.8	0.0	5.6	chr8	94475139	94475174	(50663462)	+	(CCTGC)n	Simple_repeat	1	36	(0)	3926896
1775	21.5	14.2	1.1	chr8	95073665	95074218	(50064418)	+	L1MC5	LINE/L1	8665	9303	(1)	3928141
17	24.9	0.6	9.1	chr8	96493395	96493499	(48645137)	+	A-rich	Low_complexity	1	96	(0)	3930397
13	28.6	5.3	1.3	chr8	96493402	96493476	(48645160)	+	GA-rich	Low_complexity	1	79	(0)	3930398
3745	19.1	8.9	1.7	chr8	98907537	98908379	(46230257)	C	L1MC5	LINE/L1	(86)	9218	8324	3934416
2679	25.5	2.0	0.4	chr8	141545531	141546271	(3592365)	C	L1MB7	LINE/L1	(0)	6184	5432	4003786
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
271	34.2	5.1	0.0	chr8	144686091	144686239	(452397)	C	L1MEd	LINE/L1	(5739)	1347	1191	4007918
258	32.3	15.3	1.2	chr8	144686723	144686885	(451751)	+	L2	LINE/L2	1151	1340	(2079)	4007919
200	27.5	6.1	6.1	chr9	5719098	5719244	(132675473)	+	L2	LINE/L2	2069	2215	(1204)	4016930
220	26.8	7.8	0.0	chr9	5719270	5719340	(132675377)	C	L2a	LINE/L2	(13)	3413	3337	4016931
2044	13.2	3.2	0.0	chr9	6681834	6682135	(131712582)	C	AluSz6	SINE/Alu	(0)	312	1	4018486
12	30.4	1.7	1.7	chr9	14313213	14313270	(124081447)	+	(CCCTG)n	Simple_repeat	1	59	(0)	4028781
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
1539	19.1	7.7	0.0	chr9	68747907	68748241	(69646476)	C	L1MB5	LINE/L1	(8)	6166	5804	4080363
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
1743	17.6	1.8	0.4	chr9	75144274	75144545	(63250172)	+	AluJr	SINE/Alu	1	276	(36)	4090616
1093	18.0	4.3	8.0	chr9	75144708	75145093	(63249624)	C	L1MC5	LINE/L1	(262)	9042	8672	4090617
17	7.0	3.3	0.0	chr9	75145096	75145125	(63249592)	+	(TCAA)n	Simple_repeat	1	31	(0)	4090618
45	2.1	0.0	2.0	chr9	75145139	75145188	(63249529)	+	(CTAT)n	Simple_repeat	1	50	(0)	4090619
27	6.1	0.0	0.0	chr9	75145217	75145251	(63249466)	+	(CTAC)n	Simple_repeat	1	35	(0)	4090620
2137	12.8	1.0	0.0	chr9	77406421	77406716	(60988001)	C	AluSz	SINE/Alu	(13)	299	1	4094239
2512	10.4	2.1	1.6	chr9	79644027	79644398	(58750319)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	4097550
681	25.1	3.2	7.6	chr9	79644399	79644544	(58750173)	C	MIRb	SINE/MIR	(45)	223	80	4097549
2761	24.0	5.5	2.8	chr9	82664274	82665203	(55729514)	+	L1MC5	LINE/L1	8343	9299	(5)	4101763
2706	20.6	6.6	5.2	chr9	88502183	88502474	(49892243)	+	L1MB7	LINE/L1	5870	6165	(19)	4111295
276	31.8	11.2	1.4	chr9	88502717	88502933	(49891784)	C	L2b	LINE/L2	(20)	3355	3115	4111298
670	27.0	9.7	6.8	chr9	88508837	88509246	(49885471)	+	L1MC5a	LINE/L1	2201	2623	(154)	4111310
37	25.8	3.9	1.5	chr9	92147241	92147368	(46247349)	+	(CTTC)n	Simple_repeat	1	133	(0)	4116258
21	22.9	7.3	0.0	chr9	95094020	95094100	(43300617)	+	(TC)n	Simple_repeat	1	86	(0)	4120701
1396	29.2	4.3	2.2	chr9	95094322	95094667	(43300050)	C	L1MB3	LINE/L1	(4)	6179	5820	4120702
300	20.0	2.5	9.2	chr9	96570792	96570892	(41823825)	C	MIR	SINE/MIR	(82)	126	31	4123095
1670	24.8	9.0	4.2	chr9	99139411	99140078	(39254639)	C	L1MC5	LINE/L1	(0)	9304	8602	4127904
2237	8.3	0.0	2.8	chr9	99140169	99140456	(39254261)	+	AluSg7	SINE/Alu	1	280	(29)	4127905
938	21.8	1.4	4.8	chr9	108865839	108866065	(29528652)	+	MER20	DNA/hAT-Charlie	1	219	(0)	4143425
211	25.6	7.9	3.5	chr9	108866095	108866179	(29528538)	C	MIRc	SINE/MIR	(135)	133	45	4143426
681	26.1	2.8	8.6	chr9	109329211	109329441	(29065276)	C	MIRc	SINE/MIR	(4)	264	37	4144275
12	16.9	0.0	0.0	chr9	109329615	109329641	(29065076)	+	(CCCT)n	Simple_repeat	1	27	(0)	4144276
238	29.8	9.5	3.1	chr9	122827869	122827996	(15566721)	+	L2b	LINE/L2	3205	3341	(34)	4169620
2444	23.0	11.5	2.7	chr9	125846525	125847328	(12547389)	C	L1MC5	LINE/L1	(0)	9304	8421	4175419
36	2.7	0.0	0.0	chr9	128847646	128847683	(9547034)	+	(AAC)n	Simple_repeat	1	38	(0)	4181474
234	29.0	1.4	4.2	chr9	128847689	128847760	(9546957)	C	MIRb	SINE/MIR	(28)	240	171	4181475
540	27.5	9.8	0.0	chr9	128847818	128848039	(9546678)	+	L1MC5	LINE/L1	8535	8780	(524)	4181476
625	21.9	7.2	3.1	chr9	128848014	128848048	(9546669)	+	L1M4	LINE/L1	4653	4688	(1458)	4181477
2046	13.5	0.7	0.3	chr9	128848049	128848345	(9546372)	+	AluJb	SINE/Alu	12	309	(3)	4181478
1714	20.3	15.2	3.8	chr9	132307975	132308662	(6086055)	+	L1MC5	LINE/L1	8343	9120	(184)	4188642
884	22.4	17.7	5.0	chr9	132308663	132308870	(6085847)	+	L1M5	LINE/L1	4441	4711	(1435)	4188644
1614	24.1	11.3	1.1	chr9	133124821	133125446	(5269271)	+	L1MC5	LINE/L1	8607	9304	(0)	4190094
2614	21.8	5.2	0.6	chr9	135327626	135328254	(3066463)	+	L1MB8	LINE/L1	5520	6178	(0)	4193054
2256	11.2	0.3	0.0	chrX	25056472	25056758	(130984137)	C	AluSz6	SINE/Alu	(23)	289	2	4400541
1682	24.1	4.3	4.9	chrX	25056759	25057203	(130983692)	C	L1MC5a	LINE/L1	(351)	2426	2019	4400540
2805	13.6	4.0	3.2	chrX	39762172	39762672	(116278223)	C	L1MB5	LINE/L1	(0)	6174	5670	4421131
2017	10.2	1.7	5.6	chrX	41294393	41294547	(114746348)	+	AluSz	SINE/Alu	134	292	(20)	4424063
1095	16.8	0.5	11.5	chrX	41294548	41294711	(114746184)	C	MER3	DNA/hAT-Charlie	(70)	139	1	4424062
1158	17.8	4.7	5.8	chrX	41294712	41294980	(114745915)	+	L1MC5	LINE/L1	8699	8963	(341)	4424060
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
467	36.9	13.4	3.3	chrX	69133237	69134248	(86906647)	+	L2	LINE/L2	1815	2945	(474)	4457614
666	25.3	2.1	5.2	chrX	69134371	69134562	(86906333)	+	MIR	SINE/MIR	77	262	(0)	4457615
742	12.0	0.0	0.0	chrX	74178481	74178588	(81862307)	+	HERVK3-int	LTR/ERVK	586	693	(6144)	4465236
921	17.1	1.2	0.0	chrX	74178921	74179078	(81861817)	+	HERVK3-int	LTR/ERVK	2330	2489	(4348)	4465236
1418	24.1	9.9	0.8	chrX	107456337	107456890	(48584005)	C	L1MC5a	LINE/L1	(182)	2595	2138	4504198
186	24.3	0.0	0.0	chrX	107456932	107456968	(48583927)	C	L2a	LINE/L2	(665)	2754	2718	4504194
464	33.7	0.6	1.8	chrX	107456996	107457161	(48583734)	C	L2a	LINE/L2	(773)	2646	2483	4504194
753	32.9	10.5	2.4	chrX	109658073	109658920	(46381975)	+	L2c	LINE/L2	2432	3393	(33)	4507135
395	28.6	8.9	4.9	chrX	130177312	130177495	(25863400)	C	MIRc	SINE/MIR	(14)	254	63	4536094
2364	9.7	0.0	0.0	chrX	136079533	136079831	(19961064)	C	AluSx1	SINE/Alu	(13)	299	1	4545332
2943	18.5	15.1	4.6	chrX	136079832	136080283	(19960612)	C	L1MC5	LINE/L1	(459)	8845	8353	4545331
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
7887	18.8	2.6	0.6	chrX	147207825	147209390	(8831505)	+	MSTA-int	LTR/ERVL-MaLR	34	1631	(0)	4561512
404	26.9	11.9	0.6	chrX	149431468	149431624	(6609271)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	4564597
467	27.9	18.5	3.6	chrX	149431743	149432076	(6608819)	C	L2	LINE/L2	(801)	2618	2224	4564598
333	21.9	3.0	0.0	chrY	10663511	10663574	(46563841)	C	AluYj4	SINE/Alu	(22)	289	224	4587921
275	20.9	4.3	0.0	chrY	10664501	10664567	(46562848)	C	Alu	SINE/Alu	(8)	293	224	4587924
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
511	25.4	0.8	0.6	chrY	10671966	10672627	(46554788)	+	(CCATT)n	Simple_repeat	2	665	(0)	4587949
328	20.6	3.1	0.0	chrY	10686758	10686820	(46540595)	C	FRAM	SINE/Alu	(13)	153	89	4587996
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
371	24.0	2.8	0.0	chrY	10988388	10988478	(46238937)	C	AluSx	SINE/Alu	(13)	289	188	4588607
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159