779	21.6	1.6	1.0	chr1	7568066	7569832	(241386590)	+	(TCA)n	Simple_repeat	1	1795	(0)	10010
773	15.5	0.1	0.0	chr1	31545280	31546577	(217409845)	+	(ATCC)n	Simple_repeat	1	1300	(0)	60880
45	14.9	7.0	3.6	chr1	56197734	56197862	(192758560)	+	(AC)n	Simple_repeat	1	138	(0)	108370
456	29.1	2.2	7.2	chr1	56197865	56198057	(192758365)	+	MamRep1527	LTR	35	217	(752)	108371
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
2036	23.4	5.5	3.5	chr1	234865605	234865971	(14090451)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	167	348566
2060	14.2	1.0	0.0	chr1	234865972	234866281	(14090141)	C	AluSq	SINE/Alu	(0)	313	1	348567
2339	26.7	3.9	1.3	chr1	238030008	238031099	(10925323)	+	L1MA9	LINE/L1	1455	2582	(4516)	354122
51	21.6	0.0	0.0	chr10	5576269	5576380	(128221042)	+	(CTCTCT)n	Simple_repeat	1	112	(0)	377947
270	21.0	3.9	4.3	chr10	5576382	5576615	(128220807)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	779	377948
274	16.9	4.9	4.0	chr10	7319642	7319984	(126477438)	+	HERV17-int	LTR/ERV1	708	1017	(4085)	380831
69	12.0	5.9	0.0	chr10	7319985	7320120	(126477302)	+	(AGACAG)n	Simple_repeat	1	144	(0)	380832
33	9.9	3.0	1.4	chr10	37430321	37430387	(96367035)	+	(TG)n	Simple_repeat	1	69	(0)	429510
99	18.8	1.0	0.0	chr10	44968952	44969144	(88828278)	+	(GT)n	Simple_repeat	1	195	(0)	435480
456	19.5	3.7	3.3	chr10	46525398	46526683	(87270739)	+	(CA)n	Simple_repeat	1	1334	(0)	437801
208	25.9	6.3	1.1	chr10	46526684	46526773	(87270649)	+	L2c	LINE/L2	2984	3078	(309)	437802
23	46.0	0.0	0.0	chr10	86053804	86053936	(47743486)	+	(AC)n	Simple_repeat	1	133	(0)	498912
1539	19.1	8.2	0.7	chr10	87761762	87762043	(46035379)	C	AluJr4	SINE/Alu	(6)	306	2	501789
21	4.0	0.0	0.0	chr10	101442263	101442288	(32355134)	+	(TC)n	Simple_repeat	1	26	(0)	525127
31	3.3	0.0	0.0	chr10	101442289	101442319	(32355103)	+	(TG)n	Simple_repeat	1	31	(0)	525128
944	19.1	7.2	0.5	chr10	131148070	131148290	(2649132)	+	MLT1D	LTR/ERVL-MaLR	1	237	(268)	570283
128	26.8	0.0	0.0	chr10	131148295	131148611	(2648811)	+	(CA)n	Simple_repeat	1	317	(0)	570284
1002	20.5	5.5	1.5	chr10	131148612	131148874	(2648548)	+	MLT1D	LTR/ERVL-MaLR	188	471	(34)	570283
195	27.7	1.1	1.0	chr10	133250213	133250782	(546640)	+	GA-rich	Low_complexity	1	576	(0)	572310
218	17.6	2.7	3.9	chr11	1844916	1845472	(133241150)	+	(GAGACA)n	Simple_repeat	1	572	(0)	575167
41	0.0	0.0	0.0	chr12	53664345	53664382	(79610927)	+	(AAAT)n	Simple_repeat	1	38	(0)	855206
400	5.1	3.3	6.3	chr12	53664407	53664469	(79610840)	C	Alu	SINE/Alu	(15)	286	226	855207
364	32.2	2.3	2.3	chr12	53664722	53664896	(79610413)	C	L2	LINE/L2	(575)	2844	2670	855208
407	11.2	0.0	14.0	chr12	110908554	110908646	(22366663)	C	Alu	SINE/Alu	(10)	301	222	945876
265	19.8	4.3	3.0	chr12	118575533	118576182	(14699127)	+	(GT)n	Simple_repeat	1	658	(0)	962868
644	17.1	9.9	0.7	chr12	124876124	124876270	(8399039)	+	Zaphod3	DNA/hAT-Tip100	206	367	(2256)	977029
114	21.5	0.8	0.0	chr12	124876278	124876518	(8398791)	+	(AC)n	Simple_repeat	1	243	(0)	977030
252	22.0	2.7	4.5	chr12	132239277	132239500	(1035809)	+	HERVIP10FH-int	LTR/ERV1	779	998	(4104)	989249
208	15.8	3.0	3.9	chr12	132597406	132597907	(677402)	+	(CTGTCT)n	Simple_repeat	1	517	(0)	989641
450	32.3	0.7	2.1	chr12	132950321	132951996	(323313)	+	(CA)n	Simple_repeat	1	1688	(0)	990224
390	30.3	10.6	8.6	chr12	132952000	132952174	(323135)	C	L2b	LINE/L2	(2)	3373	3218	990225
1064	20.0	0.7	0.5	chr13	16110765	16164892	(98199436)	+	ALR/Alpha	Satellite/centr	1	54247	(0)	990771
561	26.8	0.0	0.0	chr13	39416230	39416352	(74947976)	+	L2a	LINE/L2	3303	3425	(1)	1022603
200	36.4	1.2	0.1	chr13	113750914	113751408	(612920)	+	(TG)n	Simple_repeat	1	501	(0)	1124991
34	22.6	1.3	0.0	chr14	90659194	90659270	(16384448)	+	(TG)n	Simple_repeat	1	78	(0)	1234257
803	19.7	3.5	4.2	chr14	102919454	102921343	(4122375)	+	(ACCATCC)n	Simple_repeat	6	1884	(0)	1255901
430	29.6	0.1	0.2	chr14	104164659	104165877	(2877841)	+	(TG)n	Simple_repeat	1	1220	(0)	1258152
327	31.4	10.7	7.7	chr14	105577870	105578418	(1465300)	C	HAL1	LINE/L1	(1206)	1301	881	1259861
279	20.2	0.0	5.7	chr14	105578425	105578634	(1465084)	C	HERVIP10FH-int	LTR/ERV1	(4099)	1003	806	1259862
13	28.8	0.0	3.5	chr15	69990777	69990834	(32000355)	+	G-rich	Low_complexity	1	58	(0)	1341273
41	37.3	0.9	1.4	chr15	69990927	69991144	(32000045)	+	(GTGT)n	Simple_repeat	1	220	(0)	1341274
20	22.3	3.5	4.5	chr15	69991062	69991146	(32000043)	+	(TGTGCG)n	Simple_repeat	1	88	(0)	1341275
146	26.8	1.2	1.2	chr15	70557897	70558323	(31432866)	+	GA-rich	Low_complexity	1	432	(0)	1342367
437	33.3	6.9	2.7	chr15	71311697	71312072	(30679117)	+	L2b	LINE/L2	2498	2890	(529)	1343531
1136	16.1	17.9	3.1	chr15	73979802	73980056	(28011133)	+	AluJb	SINE/Alu	1	301	(11)	1348045
1688	27.2	7.5	3.4	chr15	73980057	73980742	(28010447)	+	L1ME4b	LINE/L1	169	858	(34)	1348044
78	39.5	0.3	1.6	chr16	27138311	27138679	(63199666)	+	(TGG)n	Simple_repeat	1	370	(0)	1450451
209	28.2	6.0	0.0	chr17	41730414	41730491	(41526950)	C	L2c	LINE/L2	(608)	2811	2729	1614150
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
153	26.1	0.7	1.6	chr17	67054596	67055018	(16202423)	+	(CA)n	Simple_repeat	1	426	(0)	1661309
407	31.9	0.9	0.5	chr17	73953166	73954621	(9302820)	+	(CA)n	Simple_repeat	1	1461	(0)	1673236
415	30.4	1.5	0.7	chr17	74727792	74729152	(8528289)	+	(GT)n	Simple_repeat	1	1382	(0)	1674726
261	33.2	5.7	5.7	chr17	75356643	75356958	(7900483)	+	L2-3_Crp	LINE/L2	749	1064	(1032)	1675939
495	29.2	3.6	1.1	chr17	75356992	75357178	(7900263)	+	L2	LINE/L2	2630	2821	(598)	1675933
242	32.0	3.7	1.5	chr17	79411873	79412898	(3844543)	+	(TG)n	Simple_repeat	1	1064	(0)	1683391
294	18.2	2.1	3.0	chr19	1144515	1145184	(57472432)	+	(GAGACA)n	Simple_repeat	1	660	(0)	1798287
55	20.9	3.4	3.3	chr19	1575977	1576151	(57041465)	+	(GACAGA)n	Simple_repeat	1	181	(0)	1799058
80	20.2	2.4	1.9	chr19	1667998	1668202	(56949414)	+	(GTCTCT)n	Simple_repeat	1	210	(0)	1799243
381	26.3	10.4	3.7	chr19	1668203	1668443	(56949173)	C	HAL1b	LINE/L1	(1250)	1171	913	1799244
257	20.4	6.4	0.9	chr19	1700871	1701092	(56916524)	C	HERVIP10FH-int	LTR/ERV1	(4089)	1013	779	1799329
71	16.1	4.0	2.2	chr19	1701093	1701265	(56916351)	+	(TCTGTC)n	Simple_repeat	1	180	(0)	1799330
416	23.9	3.9	1.4	chr19	3244226	3245438	(55372178)	+	(TG)n	Simple_repeat	1	1260	(0)	1802728
130	29.7	2.1	2.4	chr19	3368853	3368913	(55248703)	+	(TCTCTC)n	Simple_repeat	1	60	(0)	1803075
41	0.0	0.0	0.0	chr19	3368914	3368948	(55248668)	+	(TG)n	Simple_repeat	1	35	(0)	1803076
130	29.7	2.1	2.4	chr19	3368949	3369416	(55248200)	+	(TCTCTC)n	Simple_repeat	1	467	(0)	1803077
581	22.6	2.9	2.8	chr19	4227775	4229163	(54388453)	+	(CT)n	Simple_repeat	1	1387	(0)	1805095
293	28.5	2.4	1.0	chr19	5239077	5240056	(53377560)	+	GA-rich	Low_complexity	1	1003	(0)	1807467
229	25.1	4.3	3.1	chr19	5566143	5567061	(53050555)	+	(AGAGAC)n	Simple_repeat	1	929	(0)	1808364
128	29.0	1.7	0.7	chr19	6529393	6529813	(52087803)	+	GA-rich	Low_complexity	1	428	(0)	1810494
298	21.5	5.1	3.9	chr19	6529815	6530091	(52087525)	+	HERVIP10FH-int	LTR/ERV1	781	1011	(4091)	1810495
260	20.9	4.5	5.4	chr19	6530257	6530479	(52087137)	+	HERVIP10FH-int	LTR/ERV1	778	998	(4104)	1810497
50	18.0	6.4	2.4	chr19	6530484	6530640	(52086976)	+	(AGACAG)n	Simple_repeat	1	167	(0)	1810498
277	25.9	2.5	1.0	chr19	17445456	17446254	(41171362)	+	(CATC)n	Simple_repeat	1	819	(0)	1836371
150	22.7	4.1	1.9	chr19	19534162	19534624	(39082992)	+	(AGAGAC)n	Simple_repeat	1	482	(0)	1841146
262	24.5	0.2	0.0	chr19	35392830	35393428	(23224188)	+	(TG)n	Simple_repeat	1	600	(0)	1860310
380	17.5	5.2	1.1	chr20	25067164	25068071	(39376096)	+	(CA)n	Simple_repeat	1	955	(0)	2301664
114	24.9	4.5	1.9	chr20	26074010	26074407	(38369760)	+	(CATCAC)n	Simple_repeat	1	416	(0)	2303238
252	20.9	6.0	2.6	chr20	32606728	32606919	(31837248)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	813	2308809
114	17.0	3.7	3.3	chr20	32606922	32607216	(31836951)	+	(CTGTCT)n	Simple_repeat	1	306	(0)	2308810
278	20.6	3.5	1.3	chr20	61839278	61839968	(2604199)	+	(GT)n	Simple_repeat	1	715	(0)	2367810
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
249	13.8	4.2	1.4	chr21	14097904	14098401	(32611582)	+	(ATCACC)n	Simple_repeat	1	519	(0)	2377375
2182	12.5	1.0	0.0	chr21	31283508	31283837	(15426146)	C	AluSx	SINE/Alu	(0)	312	5	2401045
36	25.1	2.8	0.9	chr21	31410672	31410797	(15299186)	+	GA-rich	Low_complexity	1	128	(0)	2401278
1007	19.4	12.1	5.7	chr21	31420737	31420839	(15289144)	+	MLT1C	LTR/ERVL-MaLR	6	111	(356)	2401295
2439	9.0	0.0	2.8	chr21	31420840	31421160	(15288823)	+	AluSx1	SINE/Alu	1	312	(0)	2401296
227	32.4	8.0	10.2	chr21	31475367	31475476	(15234507)	+	MIRb	SINE/MIR	99	208	(60)	2401423
118	23.4	2.4	0.0	chr21	32008814	32009102	(14700881)	+	(TGGA)n	Simple_repeat	1	296	(0)	2402490
165	32.4	0.0	2.4	chr21	32533064	32533644	(14176339)	+	(TG)n	Simple_repeat	1	581	(0)	2403387
506	34.8	13.6	5.3	chr21	32646919	32648903	(14061080)	+	L2b	LINE/L2	343	2517	(902)	2403556
1894	15.1	1.1	1.4	chr21	32709917	32710200	(13999783)	+	AluSx1	SINE/Alu	1	283	(29)	2403644
32	0.0	2.6	2.6	chr21	32710201	32710238	(13999745)	+	(AAAT)n	Simple_repeat	1	39	(0)	2403645
251	18.3	2.7	2.7	chr21	32710239	32710311	(13999672)	+	L1MC5	LINE/L1	9150	9222	(82)	2403646
7422	13.2	6.0	2.7	chr21	36354601	36355667	(10354316)	C	Tigger2	DNA/TcMar-Tigger	(477)	2241	1162	2409695
36	19.3	0.0	0.0	chr21	36783798	36783864	(9926119)	+	(CA)n	Simple_repeat	1	67	(0)	2410457
1126	27.2	7.8	1.2	chr21	37449237	37449645	(9260338)	C	MLT1J1	LTR/ERVL-MaLR	(0)	444	7	2411616
317	32.0	13.8	5.9	chr21	37449832	37450336	(9259647)	C	MLT1N2	LTR/ERVL-MaLR	(6)	556	6	2411617
2784	14.2	4.2	0.2	chr21	37727992	37728470	(8981513)	+	L1MB3	LINE/L1	5682	6180	(3)	2412036
330	14.4	4.8	2.8	chr21	37761094	37761848	(8948135)	+	(GT)n	Simple_repeat	1	791	(0)	2412085
45	30.0	0.0	0.0	chr21	37891240	37891377	(8818606)	+	(CACACA)n	Simple_repeat	1	138	(0)	2412257
233	15.7	0.0	3.8	chr21	38247158	38247210	(8462773)	C	HAL1b	LINE/L1	(172)	2249	2199	2412777
289	15.3	0.0	0.0	chr21	38247210	38247635	(8462348)	+	(GATG)n	Simple_repeat	2	427	(0)	2412778
381	16.6	5.7	2.7	chr21	38622363	38623367	(8086616)	+	(AC)n	Simple_repeat	1	1062	(0)	2413252
274	17.6	3.7	3.1	chr21	38913709	38914463	(7795520)	+	(CACAACA)n	Simple_repeat	1	783	(0)	2413692
35	15.2	1.5	0.0	chr21	38914466	38914531	(7795452)	+	(CTCT)n	Simple_repeat	1	67	(0)	2413693
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
398	12.4	5.4	2.5	chr21	39919634	39920498	(6789485)	+	(TG)n	Simple_repeat	1	912	(0)	2415345
245	17.8	5.7	1.9	chr21	39985508	39986158	(6723825)	+	(AC)n	Simple_repeat	1	688	(0)	2415448
43	0.0	0.0	0.0	chr21	39986238	39986274	(6723709)	+	(CA)n	Simple_repeat	1	37	(0)	2415449
16	16.6	0.0	0.0	chr21	40851703	40851729	(5858254)	+	A-rich	Low_complexity	1	27	(0)	2416623
91	22.6	3.7	0.4	chr21	40851838	40852080	(5857903)	+	(GT)n	Simple_repeat	1	252	(0)	2416624
291	29.3	1.0	0.7	chr21	41012383	41013276	(5696707)	+	(CA)n	Simple_repeat	1	903	(0)	2416832
285	27.0	8.7	3.8	chr21	41139146	41139276	(5570707)	C	MIRc	SINE/MIR	(111)	157	20	2417017
67	27.0	4.0	2.3	chr21	41139393	41139644	(5570339)	+	(AC)n	Simple_repeat	1	262	(0)	2417018
503	17.3	6.2	1.2	chr21	41584393	41585663	(5124320)	+	(AC)n	Simple_repeat	1	1350	(0)	2417685
246	19.1	3.0	1.2	chr21	41635699	41636260	(5073723)	+	(TCCA)n	Simple_repeat	1	579	(0)	2417774
627	20.2	6.4	1.0	chr21	41828882	41830735	(4879248)	+	(CA)n	Simple_repeat	1	1973	(0)	2418047
224	20.4	7.5	1.7	chr21	41954536	41955391	(4754592)	+	(GT)n	Simple_repeat	1	905	(0)	2418221
261	18.2	3.6	0.2	chr21	42132092	42132648	(4577335)	+	(CATC)n	Simple_repeat	1	577	(0)	2418474
2315	11.8	0.3	0.0	chr21	42161141	42161445	(4548538)	+	AluSz	SINE/Alu	1	306	(6)	2418520
177	23.7	0.5	0.2	chr21	42161446	42161754	(4548229)	+	(AC)n	Simple_repeat	2	311	(0)	2418521
287	30.1	0.1	0.7	chr21	42410779	42411618	(4298365)	+	(CA)n	Simple_repeat	1	841	(0)	2418839
34	7.4	0.0	0.0	chr21	42447788	42447830	(4262153)	+	(AC)n	Simple_repeat	1	43	(0)	2418879
758	30.3	16.3	1.7	chr21	42571936	42572627	(4137356)	C	HAL1	LINE/L1	(688)	1819	1008	2419044
375	17.5	4.2	2.3	chr21	42662444	42663352	(4046631)	+	(AC)n	Simple_repeat	1	947	(0)	2419152
133	15.6	11.9	5.1	chr21	42670034	42670824	(4039159)	+	(TTCACAC)n	Simple_repeat	1	885	(0)	2419161
275	26.0	1.1	5.8	chr21	42690914	42692006	(4017977)	+	(CACCAT)n	Simple_repeat	1	1105	(0)	2419182
2295	12.1	0.0	0.0	chr21	42749856	42750160	(3959823)	+	AluSz	SINE/Alu	1	305	(7)	2419270
226	33.1	8.9	5.9	chr21	42750161	42750178	(3959805)	+	L1MC5a	LINE/L1	683	688	(236)	2419269
937	15.3	0.0	0.0	chr21	42750179	42750309	(3959674)	+	AluJo	SINE/Alu	1	131	(181)	2419271
68	16.1	4.8	5.8	chr21	42809631	42809655	(3900328)	+	(CACATG)n	Simple_repeat	1	23	(0)	2419366
25	5.3	0.0	4.7	chr21	42809656	42809698	(3900285)	+	(AGGCACACAC)n	Simple_repeat	1	43	(0)	2419367
68	16.1	4.8	5.8	chr21	42809699	42809901	(3900082)	+	(CACATG)n	Simple_repeat	6	207	(0)	2419368
192	30.5	4.7	2.7	chr21	42840191	42841184	(3868799)	+	(GT)n	Simple_repeat	1	1041	(0)	2419426
2155	14.8	0.0	0.0	chr21	42914587	42914896	(3795087)	+	AluSx	SINE/Alu	1	310	(2)	2419560
772	17.7	1.5	0.0	chr21	42914906	42915035	(3794948)	+	FLAM_C	SINE/Alu	1	132	(11)	2419561
431	36.1	9.7	6.1	chr21	43310383	43310857	(3399126)	+	L1M5	LINE/L1	4744	5237	(909)	2420134
526	29.1	8.1	2.1	chr21	43310876	43311451	(3398532)	+	L1ME4b	LINE/L1	4	642	(250)	2420135
64	25.6	0.0	0.6	chr21	43332577	43332732	(3377251)	+	(GT)n	Simple_repeat	1	156	(0)	2420167
139	27.8	0.3	1.1	chr21	43342331	43342706	(3367277)	+	(CACACA)n	Simple_repeat	1	377	(0)	2420174
448	24.6	1.7	0.0	chr21	43368574	43368687	(3341296)	+	L1MD2	LINE/L1	6231	6346	(13)	2420206
123	26.5	0.3	2.1	chr21	43368719	43369046	(3340937)	+	(TG)n	Simple_repeat	1	329	(0)	2420207
597	16.2	6.0	2.8	chr21	43604198	43605925	(3104058)	+	(AC)n	Simple_repeat	1	1782	(0)	2420490
1069	9.0	0.7	0.0	chr21	43726574	43726707	(2983276)	C	AluSx	SINE/Alu	(177)	135	1	2420706
61	32.6	2.5	1.2	chr21	43726771	43727010	(2982973)	+	(TG)n	Simple_repeat	1	246	(0)	2420707
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
12	10.4	6.1	2.9	chr21	43729052	43729084	(2980899)	+	(GCCC)n	Simple_repeat	1	35	(0)	2420709
92	34.8	0.3	0.0	chr21	43750700	43750992	(2958991)	+	(TG)n	Simple_repeat	1	294	(0)	2420748
59	37.9	0.0	0.8	chr21	43767293	43767528	(2942455)	+	(CA)n	Simple_repeat	1	236	(0)	2420767
813	15.7	1.5	0.8	chr21	43843699	43843832	(2866151)	C	AluJr4	SINE/Alu	(177)	135	1	2420908
3521	17.4	1.1	4.3	chr21	43843836	43844393	(2865590)	C	L1M4	LINE/L1	(2301)	3845	3310	2420896
2054	13.3	2.0	0.0	chr21	43855411	43855703	(2854280)	C	AluSx1	SINE/Alu	(13)	299	1	2420930
1504	26.4	9.2	11.5	chr21	43876081	43876523	(2833460)	C	L1MEd	LINE/L1	(6103)	1000	563	2420961
2153	13.8	0.3	0.6	chr21	43876848	43877158	(2832825)	C	AluSx3	SINE/Alu	(1)	310	1	2420971
54	22.1	0.8	0.8	chr21	43920208	43920329	(2789654)	+	(TG)n	Simple_repeat	1	123	(0)	2421046
2310	19.1	6.4	1.4	chr21	43920378	43920843	(2789140)	+	MER21C	LTR/ERVL	1	597	(341)	2421047
419	16.5	8.1	2.6	chr21	43958234	43959528	(2750455)	+	(GT)n	Simple_repeat	1	1400	(0)	2421097
1951	19.7	12.8	6.8	chr21	44045233	44045546	(2664437)	C	L1MEc	LINE/L1	(4559)	1841	1463	2421237
2336	7.4	1.3	1.9	chr21	44045547	44045855	(2664128)	C	AluSx1	SINE/Alu	(5)	307	1	2421246
1418	11.0	0.0	0.5	chr21	44297965	44298155	(2411828)	+	AluSx1	SINE/Alu	116	305	(7)	2421585
3143	17.2	8.3	1.5	chr21	44298158	44298777	(2411206)	C	L1MB3	LINE/L1	(23)	6160	5483	2421586
36	1.5	8.2	3.8	chr21	44404599	44404671	(2305312)	+	(GTGATGATA)n	Simple_repeat	1	79	(0)	2421704
198	25.1	3.5	1.1	chr21	44904295	44904891	(1805092)	+	(CA)n	Simple_repeat	1	618	(0)	2422298
50	21.1	7.5	3.9	chr21	44920145	44920359	(1789624)	+	(CA)n	Simple_repeat	1	222	(0)	2422315
499	17.2	6.8	0.2	chr21	45155480	45156681	(1553302)	+	(ATCC)n	Simple_repeat	1	1284	(0)	2422592
62	25.7	0.6	1.2	chr21	45208590	45208751	(1501232)	+	(TG)n	Simple_repeat	1	163	(0)	2422635
164	14.2	6.2	0.5	chr21	45474251	45474603	(1235380)	+	(GT)n	Simple_repeat	1	375	(0)	2422880
222	30.8	3.4	1.0	chr21	45529525	45530424	(1179559)	+	(GT)n	Simple_repeat	1	931	(0)	2422912
294	19.4	6.9	1.1	chr21	45591254	45592117	(1117866)	+	(CA)n	Simple_repeat	1	924	(0)	2422970
800	12.5	4.5	4.2	chr21	45634970	45636794	(1073189)	+	(GT)n	Simple_repeat	1	1907	(0)	2423026
41	6.7	1.5	3.0	chr21	45740584	45740649	(969334)	+	(GT)n	Simple_repeat	1	67	(0)	2423153
39	28.8	2.5	0.0	chr21	45740686	45740803	(969180)	+	(TG)n	Simple_repeat	1	121	(0)	2423154
339	16.1	1.0	0.0	chr21	45980515	45981115	(728868)	+	(CTCTCT)n	Simple_repeat	1	607	(0)	2423391
378	13.2	3.9	3.5	chr21	45984618	45985459	(724524)	+	(CAGAGA)n	Simple_repeat	1	875	(0)	2423395
76	33.9	0.0	0.0	chr21	46079717	46079941	(630042)	+	(AC)n	Simple_repeat	1	225	(0)	2423487
19822	10.2	2.1	0.7	chr21	46174361	46177952	(532031)	+	L1PA13	LINE/L1	2804	6442	(341)	2423578
642	13.4	5.2	1.8	chr21	46480978	46481089	(228894)	+	AluJo	SINE/Alu	196	311	(1)	2424024
2622	21.4	5.9	1.3	chr21	46481090	46481686	(228297)	C	L1ME1	LINE/L1	(126)	6053	5428	2424025
33	20.4	4.1	4.7	chr22	35453289	35453411	(15365057)	+	(AGACAG)n	Simple_repeat	1	128	(0)	2463029
256	24.2	0.5	6.3	chr22	35453428	35453634	(15364834)	+	HERVIP10FH-int	LTR/ERV1	809	1003	(4099)	2463030
43	22.7	2.7	3.9	chr22	35453635	35453795	(15364673)	+	(ACAGAG)n	Simple_repeat	1	159	(0)	2463031
433	26.7	1.9	1.3	chr22	39563195	39564490	(11253978)	+	(GT)n	Simple_repeat	1	1320	(0)	2471905
30	17.7	0.0	1.7	chr22	44480127	44480185	(6338283)	+	GA-rich	Low_complexity	1	59	(0)	2482027
332	21.7	0.8	0.1	chr22	48634110	48634818	(2183650)	+	(TCAC)n	Simple_repeat	1	715	(0)	2488458
897	23.3	7.4	8.6	chr3	129440684	129441124	(68854435)	C	MER113	DNA/hAT-Charlie	(35)	486	52	2683754
57	25.3	1.1	3.9	chr4	8263577	8263755	(181950800)	+	GA-rich	Low_complexity	1	181	(0)	2801497
260	21.5	4.8	3.4	chr4	8263758	8263964	(181950591)	+	HERVIP10FH-int	LTR/ERV1	781	990	(4112)	2801498
247	28.6	8.2	0.9	chr4	8264106	8264218	(181950337)	+	L1MC4	LINE/L1	7920	8041	(1)	2801499
254	28.9	3.3	0.4	chr5	1960429	1961298	(179576961)	+	(CA)n	Simple_repeat	1	899	(0)	3056820
197	31.6	0.2	0.3	chr5	2255801	2256408	(179281851)	+	(GT)n	Simple_repeat	1	609	(0)	3057088
276	25.5	0.8	0.3	chr5	2439489	2440155	(179098104)	+	(TCATCA)n	Simple_repeat	1	672	(0)	3057284
616	18.1	7.6	3.3	chr5	3322298	3324431	(178213828)	+	(GT)n	Simple_repeat	1	2297	(0)	3058237
178	27.2	0.4	0.6	chr5	6308638	6309104	(175229155)	+	(ATGATG)n	Simple_repeat	1	469	(0)	3061658
2573	5.5	0.0	0.3	chr5	8335353	8335645	(173202614)	+	AluY	SINE/Alu	1	292	(19)	3064221
871	15.9	0.0	3.6	chr5	57042373	57042510	(124495749)	+	FLAM_C	SINE/Alu	1	133	(10)	3125969
537	22.2	13.1	6.7	chr5	57042511	57042587	(124495672)	C	MER45A	DNA/hAT-Tip100	(85)	93	3	3125968
282	32.7	11.6	1.6	chr5	57042599	57042915	(124495344)	+	L2	LINE/L2	2488	2840	(579)	3125962
182	28.8	3.3	0.0	chr5	170551533	170551591	(10986668)	C	MIRb	SINE/MIR	(197)	71	11	3293836
160	27.4	0.5	0.2	chr5	170551619	170552040	(10986219)	+	(TG)n	Simple_repeat	1	424	(0)	3293837
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
1799	6.6	4.6	0.0	chr6	52996047	52996272	(117809707)	C	AluSx	SINE/Alu	(75)	237	1	3399376
426	21.2	2.1	1.9	chr7	653837	654886	(158691087)	+	(ATCACC)n	Simple_repeat	1	1072	(0)	3558661
24	16.3	2.0	2.0	chr7	101169233	101169282	(58176691)	+	GA-rich	Low_complexity	1	51	(0)	3708149
37	8.5	0.0	0.0	chr7	101169298	101169347	(58176626)	+	(AC)n	Simple_repeat	1	50	(0)	3708150
21	30.6	4.4	4.3	chr7	134887587	134887721	(24458252)	+	(TGCA)n	Simple_repeat	1	141	(0)	3758182
152	39.1	0.0	0.6	chr7	151299422	151299825	(8046148)	+	(TGTGTG)n	Simple_repeat	1	402	(0)	3783197
27	8.2	0.0	0.0	chr7	151299826	151299864	(8046109)	+	(TGTGCA)n	Simple_repeat	1	39	(0)	3783198
152	39.1	0.0	0.6	chr7	151299865	151300089	(8045884)	+	(TGTGTG)n	Simple_repeat	1	223	(0)	3783199
268	28.8	0.0	0.0	chr7	151300090	151300155	(8045818)	C	L1MC5	LINE/L1	(486)	8818	8753	3783196
308	28.6	2.8	0.9	chr7	151300150	151300255	(8045718)	C	HAL1M8	LINE/L1	(241)	2750	2643	3783200
240	22.1	4.2	0.5	chr7	155918469	155919104	(3426869)	+	(GT)n	Simple_repeat	1	663	(0)	3790248
382	20.9	0.3	0.0	chr7	157771646	157772423	(1573550)	+	(CACACA)n	Simple_repeat	1	780	(0)	3792733
248	17.1	2.1	0.0	chr9	65437679	65438155	(72956562)	+	(CA)n	Simple_repeat	1	487	(0)	4076256
495	28.1	4.3	0.4	chr9	65438159	65438401	(72956316)	+	L1MEg	LINE/L1	1153	1405	(4679)	4076257
108	31.8	1.3	1.0	chr9	127865862	127866252	(10528465)	+	(TG)n	Simple_repeat	1	396	(0)	4179205
297	28.9	0.1	0.1	chr9	133123678	133124400	(5270317)	+	(AC)n	Simple_repeat	1	723	(0)	4190091
775	15.4	3.0	0.8	chr9	133124401	133124530	(5270187)	+	FLAM_C	SINE/Alu	1	133	(10)	4190092
404	27.1	2.3	0.2	chr9	134599145	134600317	(3794400)	+	GA-rich	Low_complexity	1	1200	(0)	4192226
38	1.7	6.3	3.0	chr9	135261355	135261417	(3133300)	+	(TGTGTGCCTG)n	Simple_repeat	1	67	(0)	4192965
1168	27.5	8.3	1.4	chr9	136042288	136042632	(2352085)	+	L1MEc	LINE/L1	4852	5224	(1095)	4193955
19	7.3	3.5	0.0	chr9	136043027	136043055	(2351662)	+	(CA)n	Simple_repeat	1	30	(0)	4193962
665	29.1	4.8	3.2	chr9	136043060	136043536	(2351181)	+	L1M5	LINE/L1	5072	5568	(611)	4193963
630	23.9	2.6	5.0	chr9	137268599	137268728	(1125989)	C	MSTD	LTR/ERVL-MaLR	(68)	328	204	4195421
72	24.0	1.4	3.6	chr9	137268731	137268946	(1125771)	+	GA-rich	Low_complexity	1	219	(0)	4195423
165	29.9	0.4	0.6	chrX	1419907	1420411	(154620484)	+	(TCTC)n	Simple_repeat	1	507	(0)	4360950
444	25.1	18.1	0.6	chrX	65726291	65726489	(90314406)	+	MIRb	SINE/MIR	6	262	(0)	4452847
34	16.7	0.0	0.0	chrX	65726581	65726640	(90314255)	+	(GT)n	Simple_repeat	1	60	(0)	4452848