3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
17	18.9	4.0	1.9	chr1	941911	941960	(248014462)	+	(CCG)n	Simple_repeat	1	52	(0)	1190
15	26.6	0.0	2.0	chr1	942055	942105	(248014317)	+	G-rich	Low_complexity	1	51	(0)	1191
293	28.2	1.8	0.0	chr1	1008371	1008480	(247947942)	C	L1MD	LINE/L1	(3803)	2343	2232	1268
13	22.5	2.0	3.9	chr1	1019613	1019662	(247936760)	+	G-rich	Low_complexity	1	51	(0)	1291
16	27.1	0.0	4.5	chr1	1019816	1019882	(247936540)	+	(CCCGC)n	Simple_repeat	1	67	(0)	1292
43	19.6	4.5	0.0	chr1	1019934	1020044	(247936378)	+	G-rich	Low_complexity	1	116	(0)	1293
31	26.0	2.5	5.6	chr1	1020044	1020055	(247936367)	+	(GCCCC)n	Simple_repeat	1	16	(145)	1294
12	28.8	0.0	0.0	chr1	1020056	1020097	(247936325)	+	(CCCC)n	Simple_repeat	1	42	(0)	1295
31	26.0	2.5	5.6	chr1	1020098	1020200	(247936222)	+	(GCCCC)n	Simple_repeat	17	161	(0)	1294
17	7.2	0.0	6.1	chr1	1020562	1020603	(247935819)	+	(CGC)n	Simple_repeat	1	39	(0)	1296
13	19.0	1.8	7.1	chr1	1068759	1068813	(247887609)	+	(GTGCAG)n	Simple_repeat	1	56	(0)	1333
13	18.8	4.5	2.2	chr1	1116008	1116051	(247840371)	+	(CCCCAGC)n	Simple_repeat	1	46	(0)	1381
14	23.3	4.8	5.7	chr1	1427636	1427719	(247528703)	+	(CGCTGC)n	Simple_repeat	1	88	(0)	1731
156	13.3	1.5	0.0	chr1	1427958	1428217	(247528205)	+	(GGAGG)n	Simple_repeat	1	264	(0)	1732
17	21.6	0.0	7.3	chr1	1631607	1631674	(247324748)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	2073
13	22.5	2.0	3.9	chr1	1631948	1631997	(247324425)	+	(CCCAGGC)n	Simple_repeat	1	51	(0)	2074
250	34.7	7.6	1.2	chr1	1981143	1981387	(246975035)	+	ERVL-E-int	LTR/ERVL	4770	5031	(636)	2694
14	23.2	0.0	2.4	chr1	2194655	2194696	(246761726)	+	(CCGC)n	Simple_repeat	1	42	(0)	2983
2507	5.0	0.0	1.7	chr1	2211901	2212201	(246744221)	C	AluY	SINE/Alu	(10)	301	6	3007
103	24.2	3.0	0.4	chr1	3351525	3351795	(245604627)	+	(TCTC)n	Simple_repeat	1	279	(0)	3933
15	11.6	5.1	2.4	chr1	3413123	3413161	(245543261)	+	(ACCCC)n	Simple_repeat	1	41	(0)	3976
15	14.9	2.6	2.5	chr1	3502203	3502241	(245454181)	+	G-rich	Low_complexity	1	40	(0)	4063
2452	9.4	0.0	0.0	chr1	3667470	3667776	(245288646)	+	AluSc8	SINE/Alu	2	308	(3)	4212
1971	14.6	0.0	2.6	chr1	3991513	3991821	(244964601)	C	AluSz6	SINE/Alu	(10)	302	2	4680
14	20.1	0.0	0.0	chr1	4654351	4654384	(244302038)	+	G-rich	Low_complexity	1	34	(0)	5644
261	34.0	14.7	0.9	chr1	4851359	4851569	(244104853)	+	MIR	SINE/MIR	8	252	(10)	5897
61	15.0	1.7	0.8	chr1	4969138	4969253	(243987169)	+	G-rich	Low_complexity	1	118	(0)	6054
203	25.4	13.2	8.0	chr1	4969295	4969444	(243986978)	+	MIRb	SINE/MIR	91	249	(19)	6055
1406	25.6	5.4	3.9	chr1	5979819	5980351	(242976071)	+	MER74A	LTR/ERVL	14	554	(4)	7515
269	35.0	13.2	0.8	chr1	5980352	5980590	(242975832)	C	L2a	LINE/L2	(418)	3001	2729	7513
13	4.2	8.0	0.0	chr1	6236099	6236123	(242720299)	+	(CCCG)n	Simple_repeat	1	27	(0)	7886
2301	8.2	0.0	0.3	chr1	6236269	6236561	(242719861)	+	AluSz	SINE/Alu	2	293	(19)	7887
255	22.3	15.0	3.7	chr1	6472076	6472210	(242484212)	+	L2b	LINE/L2	3059	3211	(164)	8283
202	28.9	4.3	2.2	chr1	6941076	6941167	(242015255)	C	MIRb	SINE/MIR	(174)	94	1	9158
19	22.2	6.9	3.7	chr1	7704012	7704112	(241252310)	+	(GCCTCCG)n	Simple_repeat	1	108	(0)	10190
12	17.0	2.9	2.8	chr1	7704248	7704282	(241252140)	+	(GGCGG)n	Simple_repeat	1	36	(0)	10191
766	13.2	4.8	0.8	chr1	7902600	7902720	(241053702)	C	AluJr	SINE/Alu	(186)	126	1	10520
2437	9.8	0.0	0.0	chr1	7922895	7923200	(241033222)	C	AluSx4	SINE/Alu	(4)	306	1	10571
1519	25.4	6.4	6.0	chr1	7923201	7923556	(241032866)	+	L1MD2	LINE/L1	348	1034	(5599)	10569
909	18.9	1.3	0.0	chr1	8217833	8217985	(240738437)	+	AluJb	SINE/Alu	137	291	(21)	11193
12	23.5	1.8	5.4	chr1	8703038	8703092	(240253330)	+	(GGCCGCT)n	Simple_repeat	1	56	(0)	12084
285	23.1	0.0	1.5	chr1	8988262	8988327	(239968095)	C	MIR3	SINE/MIR	(31)	177	113	12699
2029	10.0	0.4	0.0	chr1	9104719	9104997	(239851425)	+	AluSx1	SINE/Alu	1	280	(32)	12945
41	0.0	0.0	0.0	chr1	9105035	9105069	(239851353)	+	(AC)n	Simple_repeat	1	35	(0)	12946
12	20.2	0.0	6.7	chr1	9823796	9823840	(239132582)	+	G-rich	Low_complexity	1	45	(0)	14454
15	0.0	0.0	0.0	chr1	9823863	9823881	(239132541)	+	(GCC)n	Simple_repeat	1	19	(0)	14455
2233	18.0	7.8	4.2	chr1	12678323	12678669	(236277753)	C	MER70C	LTR/ERVL	(163)	368	2	20225
509	12.4	6.5	24.5	chr1	12678670	12678849	(236277573)	C	MLT1F2	LTR/ERVL-MaLR	(307)	253	111	20224
33	0.0	0.0	2.8	chr1	13750370	13750405	(235206017)	+	(TTTGTTTT)n	Simple_repeat	1	36	(0)	21988
346	19.4	1.5	0.0	chr1	13923778	13923844	(235032578)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(999)	69	2	22250
290	32.2	0.6	4.4	chr1	13923891	13924072	(235032350)	C	L2	LINE/L2	(800)	2619	2445	22251
20	8.4	5.3	0.0	chr1	14924036	14924044	(234032378)	+	(GGGGGC)n	Simple_repeat	1	40	(0)	24178
15	20.0	0.0	0.0	chr1	14924045	14924073	(234032349)	+	G-rich	Low_complexity	1	29	(0)	24179
237	20.0	3.9	0.0	chr1	16207348	16207397	(232749025)	C	L2c	LINE/L2	(0)	3387	3336	26930
1826	15.1	3.8	0.0	chr1	17371423	17371700	(231584722)	+	AluJb	SINE/Alu	4	292	(20)	29280
16	4.5	0.0	0.0	chr1	17372390	17372412	(231584010)	+	(GGCA)n	Simple_repeat	1	23	(0)	29281
199	27.6	12.4	8.6	chr1	17372521	17372659	(231583763)	+	MIRb	SINE/MIR	43	187	(81)	29282
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
13	5.3	0.0	0.0	chr1	19485439	19485458	(229470964)	+	(GGC)n	Simple_repeat	1	20	(0)	33724
4072	5.9	1.0	0.2	chr1	19541477	19541984	(229414438)	+	MER9a3	LTR/ERVK	1	512	(0)	33889
3471	9.7	2.2	0.5	chr1	19541985	19542507	(229413915)	+	HERVK9-int	LTR/ERVK	1	619	(5402)	33889
38123	6.3	0.2	0.5	chr1	19542502	19547188	(229409234)	+	HERVK9-int	LTR/ERVK	1349	6021	(0)	33889
12	21.2	2.5	2.4	chr1	19664826	19664865	(229291557)	+	(GCGCG)n	Simple_repeat	1	41	(0)	34169
2314	11.2	0.0	1.0	chr1	20232037	20232340	(228724082)	+	AluSx1	SINE/Alu	1	301	(11)	35330
3858	13.9	6.1	2.9	chr1	20232361	20233359	(228723063)	C	MER11A	LTR/ERVK	(0)	1266	1	35331
15	28.1	2.4	8.5	chr1	20430627	20430752	(228525670)	+	G-rich	Low_complexity	1	129	(0)	35753
37	27.5	3.0	4.8	chr1	20731920	20732119	(228224303)	+	(GCGCCCC)n	Simple_repeat	1	206	(0)	36438
29	25.9	2.4	4.0	chr1	20787240	20787362	(228169060)	+	(CGCCGC)n	Simple_repeat	1	126	(0)	36557
9980	2.6	0.1	18.2	chr1	21023240	21024912	(227931510)	+	SVA_F	Retroposon/SVA	5	1375	(0)	36986
11	20.7	0.0	2.9	chr1	21289985	21290019	(227666403)	+	(GGCAGC)n	Simple_repeat	1	35	(0)	37581
3211	22.0	8.8	1.9	chr1	21490542	21491480	(227464942)	+	LTR28C	LTR/ERV1	1	1659	(96)	38003
1333	15.1	0.5	2.7	chr1	21491484	21491707	(227464715)	C	AluJb	SINE/Alu	(82)	230	12	38002
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
200	27.9	4.8	4.8	chr1	21659612	21659694	(227296728)	C	MIRc	SINE/MIR	(64)	204	122	38410
1985	8.3	0.0	4.0	chr1	22451392	22451668	(226504754)	+	AluSq	SINE/Alu	40	305	(8)	40206
986	20.9	11.4	5.6	chr1	22452359	22452678	(226503744)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	40207
356	30.6	13.7	0.0	chr1	22975999	22976168	(225980254)	C	MIR	SINE/MIR	(24)	238	42	41380
271	25.6	1.3	4.9	chr1	22976201	22976282	(225980140)	+	MIRb	SINE/MIR	174	252	(16)	41381
29	3.2	0.0	0.0	chr1	22976307	22976338	(225980084)	+	(GTTT)n	Simple_repeat	1	32	(0)	41382
265	19.1	2.1	0.0	chr1	22976384	22976430	(225979992)	+	L2c	LINE/L2	3301	3348	(39)	41383
193	26.4	4.2	3.2	chr1	22976689	22976782	(225979640)	C	MIRb	SINE/MIR	(38)	230	136	41384
186	22.7	13.2	2.9	chr1	22976784	22976851	(225979571)	+	L2	LINE/L2	2819	2894	(525)	41385
20	17.4	3.6	9.7	chr1	23168101	23168210	(225788212)	+	(GCCCGCG)n	Simple_repeat	1	114	(0)	41759
17	15.1	6.8	0.0	chr1	23168708	23168751	(225787671)	+	(CCG)n	Simple_repeat	1	47	(0)	41760
12	15.0	3.3	0.0	chr1	23344075	23344104	(225612318)	+	(CCACCC)n	Simple_repeat	1	31	(0)	42186
373	28.3	6.2	6.8	chr1	23478933	23479095	(225477327)	+	MLT1O	LTR/ERVL-MaLR	6	167	(375)	42520
11	17.7	5.0	2.4	chr1	23484137	23484176	(225472246)	+	G-rich	Low_complexity	1	42	(0)	42532
397	28.8	0.9	0.0	chr1	23484865	23484975	(225471447)	+	MIRb	SINE/MIR	76	187	(81)	42533
13	15.2	2.5	4.9	chr1	23743733	23743772	(225212650)	+	G-rich	Low_complexity	1	41	(0)	43265
28	17.4	0.0	1.7	chr1	24672613	24672672	(224283750)	+	(TTTTTG)n	Simple_repeat	1	60	(0)	45417
26	18.6	4.5	0.0	chr1	24672673	24672679	(224283743)	+	(TTTTTC)n	Simple_repeat	1	70	(0)	45418
12	16.1	0.0	7.5	chr1	25197959	25197998	(223758424)	+	(CTTTTTT)n	Simple_repeat	1	40	(0)	46583
44	22.2	4.3	3.5	chr1	25616685	25616846	(223339576)	+	(CGG)n	Simple_repeat	1	169	(0)	47516
995	19.7	2.5	10.6	chr1	25616873	25617481	(223338941)	+	MER52D	LTR/ERV1	5	1016	(1107)	47517
2195	8.8	0.7	0.4	chr1	25892108	25892381	(223064041)	+	AluSx1	SINE/Alu	1	275	(37)	48042
19	0.0	0.0	0.0	chr1	25892382	25892402	(223064020)	+	(T)n	Simple_repeat	1	21	(0)	48043
255	31.6	6.1	2.7	chr1	25892427	25892555	(223063867)	+	MIR3	SINE/MIR	33	170	(98)	48044
13	22.4	0.0	4.4	chr1	26410838	26410882	(222545540)	+	G-rich	Low_complexity	1	45	(0)	49289
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
224	21.3	4.1	0.0	chr1	26621616	26621662	(222334760)	C	MIR1_Amn	SINE/MIR	(62)	168	120	49807
28	3.3	0.0	0.0	chr1	26826953	26826983	(222129439)	+	(GCAGCG)n	Simple_repeat	1	31	(0)	50250
15	13.4	0.0	10.0	chr1	27234576	27234625	(221721797)	+	(CGCAGG)n	Simple_repeat	1	50	(0)	51286
16	32.7	0.0	0.0	chr1	27234693	27234745	(221721677)	+	(GT)n	Simple_repeat	1	53	(0)	51287
14	10.8	6.8	4.3	chr1	27235124	27235167	(221721255)	+	G-rich	Low_complexity	1	47	(0)	51288
12	23.3	2.5	0.0	chr1	27575934	27575973	(221380449)	+	G-rich	Low_complexity	1	41	(0)	52050
31	0.0	0.0	0.0	chr1	27599180	27599208	(221357214)	+	(CAGGGC)n	Simple_repeat	1	29	(0)	52095
2542	7.7	0.0	0.6	chr1	27830195	27830507	(221125915)	C	AluSz	SINE/Alu	(0)	312	2	52639
1518	24.7	5.4	5.4	chr1	27878589	27879071	(221077351)	C	L1MC4	LINE/L1	(121)	7921	7439	52740
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
247	29.4	0.9	7.6	chr1	27915331	27915354	(221041068)	C	L2b	LINE/L2	(0)	3375	3354	52827
1679	15.8	2.0	1.7	chr1	27915355	27915651	(221040771)	+	AluJr	SINE/Alu	4	301	(11)	52828
41	15.7	0.0	2.4	chr1	28260101	28260183	(220696239)	+	(CCCCTC)n	Simple_repeat	1	83	(0)	53685
12	20.7	5.1	0.0	chr1	28553062	28553100	(220403322)	+	(GCCCC)n	Simple_repeat	1	41	(0)	54505
13	7.5	7.1	0.0	chr1	28737394	28737421	(220219001)	+	(TTCC)n	Simple_repeat	1	30	(0)	55024
672	12.1	12.8	0.0	chr1	28881838	28881953	(220074469)	C	AluJb	SINE/Alu	(179)	133	1	55395
372	29.2	0.0	0.0	chr1	28882364	28882459	(220073963)	+	MIRc	SINE/MIR	57	152	(116)	55396
193	34.3	0.0	4.1	chr1	28887334	28887406	(220069016)	C	AmnSINE2	SINE/tRNA-Deu	(253)	105	36	55410
12	32.4	0.0	1.8	chr1	28887562	28887616	(220068806)	+	(CCCGG)n	Simple_repeat	1	55	(0)	55411
13	27.2	3.8	0.0	chr1	28887905	28887957	(220068465)	+	(TCTGTCG)n	Simple_repeat	1	55	(0)	55412
13	8.9	0.0	3.9	chr1	28914599	28914624	(220041798)	+	(TCGC)n	Simple_repeat	1	26	(0)	55498
16	32.2	1.2	2.5	chr1	28914778	28914857	(220041565)	+	(GGC)n	Simple_repeat	1	81	(0)	55499
209	22.4	6.5	0.0	chr1	29231243	29231300	(219725122)	C	MIRb	SINE/MIR	(29)	239	178	56220
19	15.5	6.6	3.1	chr1	29275374	29275434	(219680988)	+	(TTC)n	Simple_repeat	1	65	(0)	56306
1062	20.8	2.7	0.8	chr1	29275838	29276157	(219680265)	C	L1M5	LINE/L1	(2467)	3679	3351	56307
199	15.9	1.2	1.9	chr1	29707258	29707649	(219248773)	+	G-rich	Low_complexity	1	389	(0)	57129
212	41.5	1.9	1.9	chr1	30191060	30191216	(218765206)	C	L2	LINE/L2	(468)	2951	2795	57996
2132	10.7	2.7	0.0	chr1	30191735	30192025	(218764397)	C	AluSx1	SINE/Alu	(7)	305	7	57997
224	21.3	16.4	1.6	chr1	30373758	30373819	(218582603)	C	MIR3	SINE/MIR	(104)	104	31	58315
51	30.6	2.7	3.0	chr1	31154953	31155209	(217801213)	+	G-rich	Low_complexity	1	264	(0)	59976
203	31.5	10.5	0.0	chr1	31155650	31155760	(217800662)	+	MIRc	SINE/MIR	93	216	(52)	59977
263	24.4	8.4	6.4	chr1	31170752	31170891	(217785531)	C	MIR3	SINE/MIR	(10)	198	56	60028
2927	19.7	2.2	12.8	chr1	31171162	31171364	(217785058)	+	LTR8	LTR/ERV1	1	192	(499)	60029
496	23.2	22.3	4.1	chr1	31549245	31549608	(217406814)	C	L2a	LINE/L2	(1)	3425	2977	60884
17	20.8	5.2	1.6	chr1	31617465	31617522	(217338900)	+	(TGGA)n	Simple_repeat	1	61	(0)	61030
12	23.6	2.0	4.0	chr1	31617621	31617669	(217338753)	+	(CCCG)n	Simple_repeat	1	50	(0)	61031
1512	14.2	1.8	0.9	chr1	31637446	31637671	(217318751)	+	AluJr	SINE/Alu	84	311	(1)	61066
345	32.4	3.9	1.3	chr1	31637698	31637847	(217318575)	C	Charlie15a	DNA/hAT-Charlie	(69)	155	2	61067
207	26.8	0.0	1.8	chr1	31637862	31637918	(217318504)	+	MIRb	SINE/MIR	210	265	(3)	61065
229	31.5	10.0	4.5	chr1	31637964	31638213	(217318209)	C	L2b	LINE/L2	(38)	3349	3078	61068
1945	12.2	0.3	0.7	chr1	31807107	31807392	(217149030)	+	AluSz6	SINE/Alu	2	286	(26)	61350
3666	25.9	7.7	7.9	chr1	31807393	31808869	(217147553)	+	L1MEd	LINE/L1	2876	4337	(1809)	61342
3193	8.0	0.2	0.2	chr1	31816327	31816779	(217139643)	C	L1PREC2	LINE/L1	(2)	6158	5706	61366
221	27.2	10.6	11.8	chr1	32062317	32062398	(216894024)	+	MIRb	SINE/MIR	167	248	(20)	61970
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
2351	8.2	0.0	3.2	chr1	32266212	32266525	(216689897)	+	AluY	SINE/Alu	1	305	(6)	62462
303	23.2	0.0	0.0	chr1	32266526	32266581	(216689841)	C	AluJo	SINE/Alu	(117)	195	140	62463
135	20.8	1.7	0.3	chr1	32266584	32266877	(216689545)	+	(TCCTCC)n	Simple_repeat	1	299	(0)	62464
385	33.2	5.8	2.0	chr1	32266943	32267139	(216689283)	C	L3	LINE/CR1	(11)	4088	3884	62465
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
14	15.3	0.0	0.0	chr1	32335758	32335786	(216620636)	+	(CCCCT)n	Simple_repeat	1	29	(0)	62646
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
13	10.5	6.5	0.0	chr1	32539961	32539991	(216416431)	+	G-rich	Low_complexity	1	33	(0)	63101
14	16.3	8.0	1.9	chr1	32742147	32742196	(216214226)	+	(AAGGCC)n	Simple_repeat	1	54	(0)	63631
15	12.2	6.0	5.7	chr1	32886433	32886482	(216069940)	+	(CCG)n	Simple_repeat	1	53	(0)	63958
183	25.9	3.3	17.6	chr1	33126952	33127023	(215829399)	+	MIR1_Amn	SINE/MIR	102	156	(74)	64499
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
211	32.3	10.1	1.5	chr1	33443477	33443674	(215512748)	C	L2b	LINE/L2	(913)	2506	2290	65114
5242	8.4	1.3	1.8	chr1	33796295	33797414	(215159008)	+	MER11A	LTR/ERVK	1	1266	(0)	65683
15	18.2	0.0	2.6	chr1	36464660	36464698	(212491724)	+	(CCCCA)n	Simple_repeat	1	39	(0)	70934
566	18.7	15.3	0.0	chr1	36624480	36624634	(212331788)	+	MER5A	DNA/hAT-Charlie	6	188	(1)	71259
970	31.6	3.4	6.5	chr1	37129282	37129934	(211826488)	C	L2b	LINE/L2	(0)	3375	2737	72173
1013	26.1	11.2	1.1	chr1	37281641	37282237	(211674185)	+	L2a	LINE/L2	2741	3410	(16)	72416
80	14.8	2.8	3.3	chr1	37282238	37282416	(211674006)	+	GA-rich	Low_complexity	1	184	(0)	72417
185	37.1	1.0	0.0	chr1	37282487	37282583	(211673839)	+	L3b	LINE/CR1	4978	5075	(157)	72418
37	32.3	0.7	1.4	chr1	37474624	37474766	(211481656)	+	GA-rich	Low_complexity	1	144	(0)	72810
12	10.2	0.0	10.3	chr1	37514263	37514301	(211442121)	+	(TCCCCC)n	Simple_repeat	1	39	(0)	72892
16	20.8	2.6	7.6	chr1	37514389	37514465	(211441957)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	72893
12	16.0	0.0	3.3	chr1	37514529	37514558	(211441864)	+	(CGCCG)n	Simple_repeat	1	30	(0)	72894
14	16.4	2.9	0.0	chr1	37946923	37946956	(211009466)	+	(CCTGC)n	Simple_repeat	1	35	(0)	73787
357	31.1	11.5	2.5	chr1	38559254	38559420	(210397002)	C	MIR	SINE/MIR	(71)	197	12	74894
300	19.5	2.4	6.8	chr1	38559440	38559527	(210396895)	C	MIR3	SINE/MIR	(65)	143	60	74895
220	37.3	0.9	1.8	chr1	38559634	38559745	(210396677)	+	MamSINE1	SINE/tRNA-RTE	178	288	(2)	74896
1766	15.9	8.7	2.1	chr1	39609192	39609577	(209346845)	+	MLT2C2	LTR/ERVL	1	414	(50)	77050
597	31.6	9.3	2.5	chr1	39609599	39610208	(209346214)	C	L2a	LINE/L2	(425)	2994	2339	77049
244	26.7	7.4	2.6	chr1	40948807	40948883	(208007539)	+	L2b	LINE/L2	3246	3326	(49)	79899
300	20.0	6.9	1.0	chr1	40949347	40949434	(208006988)	+	L2b	LINE/L2	3292	3386	(1)	79899
13	21.5	4.7	0.0	chr1	40949438	40949480	(208006942)	+	G-rich	Low_complexity	1	45	(0)	79900
2747	5.0	0.6	0.0	chr1	41949988	41950309	(207006113)	+	LTR17	LTR/ERV1	1	324	(456)	81718
28	2.9	2.9	0.0	chr1	41950310	41950344	(207006078)	+	(CAAAA)n	Simple_repeat	1	36	(0)	81719
21	13.0	0.0	4.3	chr1	42817424	42817469	(206138953)	+	G-rich	Low_complexity	1	46	(0)	83212
32	0.0	2.6	2.6	chr1	42924886	42924923	(206031499)	+	(CCCAC)n	Simple_repeat	1	39	(0)	83368
11	24.3	0.0	0.0	chr1	42925014	42925047	(206031375)	+	(CCCGCA)n	Simple_repeat	1	34	(0)	83369
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
48	8.0	0.0	0.0	chr1	43530912	43530977	(205425445)	+	(CGGCTC)n	Simple_repeat	1	66	(0)	84463
14	18.9	4.8	0.0	chr1	43531119	43531160	(205425262)	+	(CCCCT)n	Simple_repeat	1	44	(0)	84464
13	14.0	10.2	1.9	chr1	43531326	43531374	(205425048)	+	(CGCT)n	Simple_repeat	1	54	(0)	84465
17	11.0	4.9	2.3	chr1	43531830	43531870	(205424552)	+	(CGTCC)n	Simple_repeat	1	43	(0)	84466
234	28.8	1.5	0.0	chr1	43836435	43836500	(205119922)	C	L2b	LINE/L2	(20)	3355	3289	85014
309	27.9	9.2	0.1	chr1	43836825	43836942	(205119480)	C	MIR3	SINE/MIR	(99)	169	40	85015
17	24.9	3.5	0.0	chr1	44030752	44030808	(204925614)	+	(GGCA)n	Simple_repeat	1	59	(0)	85305
195	27.0	3.1	1.6	chr1	44119425	44119488	(204836934)	C	L2a	LINE/L2	(15)	3411	3347	85487
612	22.8	2.5	3.1	chr1	44595028	44595190	(204361232)	+	MER5A1	DNA/hAT-Charlie	1	162	(4)	86338
256	36.5	5.5	6.3	chr1	44820495	44820716	(204135706)	C	L2c	LINE/L2	(238)	3149	2930	86773
286	27.4	2.9	2.2	chr1	44820711	44820833	(204135589)	C	MIRc	SINE/MIR	(130)	138	11	86774
2050	12.3	2.0	0.0	chr1	44843552	44843843	(204112579)	C	AluSx	SINE/Alu	(14)	298	1	86817
6394	9.1	5.9	33.5	chr1	45105812	45107227	(203849195)	+	SVA_A	Retroposon/SVA	404	1386	(1)	87352
10290	14.7	1.4	1.4	chr1	45257534	45258932	(203697490)	+	MSTA-int	LTR/ERVL-MaLR	1	1412	(219)	87614
1153	27.4	13.3	3.3	chr1	46099489	46100831	(202855591)	C	L1ME3E	LINE/L1	(296)	5946	4418	89328
8303	8.2	1.1	0.3	chr1	46384634	46385780	(202570642)	C	HERVIP10FH-int	LTR/ERV1	(2014)	3088	1933	89964
2755	4.6	0.3	0.0	chr1	46385782	46386104	(202570318)	C	LTR17	LTR/ERV1	(456)	324	1	89965
2502	8.7	0.3	0.0	chr1	46584969	46585303	(202371119)	+	AluSx1	SINE/Alu	1	312	(0)	90291
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	17.1	2.3	4.5	chr1	46668451	46668493	(202287929)	+	G-rich	Low_complexity	1	44	(0)	90459
671	31.8	8.9	7.0	chr1	46860653	46861421	(202095001)	+	L1MEg	LINE/L1	1	785	(5299)	90701
15091	17.2	4.0	1.6	chr1	46861444	46863201	(202093221)	+	L1M2	LINE/L1	722	2521	(5045)	90702
6769	9.7	15.8	0.7	chr1	46900689	46901761	(202054661)	+	MER11A	LTR/ERVK	1	1266	(0)	90752
22914	9.1	0.5	0.1	chr1	46901768	46904716	(202051706)	+	HERVK11-int	LTR/ERVK	5	2964	(4989)	90752
4891	17.3	5.2	5.5	chr1	46906999	46908072	(202048350)	+	MER11A	LTR/ERVK	1	1071	(0)	90752
16	16.3	0.0	2.8	chr1	47438097	47438132	(201518290)	+	(GCG)n	Simple_repeat	1	36	(0)	91599
964	19.5	0.0	0.6	chr1	47496110	47496273	(201460149)	C	AluJo	SINE/Alu	(13)	299	137	91714
3040	18.3	10.6	3.4	chr1	47496286	47496497	(201459925)	C	L1ME2	LINE/L1	(0)	6164	5948	91715
27	5.5	0.0	2.5	chr1	47997482	47997521	(200958901)	+	(GGGCC)n	Simple_repeat	1	40	(0)	92701
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
12	10.7	2.9	5.7	chr1	50048045	50048078	(198908344)	+	(GCGAGA)n	Simple_repeat	1	35	(0)	96036
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
17	15.0	4.3	2.1	chr1	50978056	50978101	(197978321)	+	G-rich	Low_complexity	1	48	(0)	97722
2353	6.2	0.3	0.0	chr1	51229879	51230169	(197726253)	+	HERV17-int	LTR/ERV1	8335	8626	(0)	98228
2298	11.7	0.0	0.6	chr1	51230170	51230497	(197725925)	+	LTR17	LTR/ERV1	1	326	(454)	98228
14	10.7	0.0	8.3	chr1	51230500	51230535	(197725887)	+	(AAT)n	Simple_repeat	1	36	(0)	98229
258	21.0	1.6	1.6	chr1	51230693	51230755	(197725667)	+	MIRc	SINE/MIR	82	144	(124)	98230
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
15	14.1	1.7	10.2	chr1	51519284	51519341	(197437081)	+	G-rich	Low_complexity	1	59	(0)	98833
23	13.7	2.7	7.8	chr1	51519364	51519438	(197436984)	+	(CCCG)n	Simple_repeat	1	77	(0)	98834
244	31.8	7.0	0.9	chr1	51519558	51519665	(197436757)	+	MIRb	SINE/MIR	88	202	(66)	98835
14	18.9	0.0	2.6	chr1	51990620	51990657	(196965765)	+	G-rich	Low_complexity	1	38	(0)	99906
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
507	29.7	14.7	2.9	chr1	52365191	52365731	(196590691)	C	L2b	LINE/L2	(13)	3362	2745	100698
13	15.2	2.5	4.9	chr1	52365969	52366008	(196590414)	+	(CCGCG)n	Simple_repeat	1	41	(0)	100699
12	18.7	4.3	4.2	chr1	52366414	52366459	(196589963)	+	(CTCG)n	Simple_repeat	1	48	(0)	100700
532	31.8	9.0	7.9	chr1	52425565	52426080	(196530342)	C	L2c	LINE/L2	(0)	3387	2869	100815
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
4839	15.7	6.1	2.7	chr1	52640629	52641513	(196314909)	+	MER21C	LTR/ERVL	20	936	(2)	101328
809	15.4	0.0	0.8	chr1	52641661	52641777	(196314645)	+	AluJr	SINE/Alu	3	118	(194)	101329
1862	18.2	0.0	0.3	chr1	52641827	52642122	(196314300)	+	AluJb	SINE/Alu	7	301	(11)	101330
1747	28.0	9.3	5.1	chr1	52725976	52726273	(196230149)	C	L2	LINE/L2	(2441)	978	634	101571
32	0.0	0.0	0.0	chr1	52726473	52726502	(196229920)	+	(GGCTGC)n	Simple_repeat	1	30	(0)	101582
283	32.6	13.4	0.0	chr1	53173163	53173291	(195783131)	+	MIRb	SINE/MIR	104	252	(16)	102590
131	13.7	3.2	3.1	chr1	53173339	53173618	(195782804)	+	(CTCTC)n	Simple_repeat	1	289	(0)	102591
33	21.5	0.0	2.4	chr1	53173623	53173706	(195782716)	+	(ACAC)n	Simple_repeat	1	84	(0)	102592
14	16.1	0.0	0.0	chr1	53173689	53173717	(195782705)	+	(GCGC)n	Simple_repeat	1	29	(0)	102593
31	0.0	0.0	0.0	chr1	53173718	53173744	(195782678)	+	(CA)n	Simple_repeat	1	27	(0)	102594
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
1489	13.2	15.5	2.0	chr1	53405948	53406198	(195550224)	C	AluJb	SINE/Alu	(21)	291	1	103048
931	29.2	2.5	0.0	chr1	53406385	53406617	(195549805)	C	MIRb	SINE/MIR	(8)	260	22	103049
2027	17.4	8.1	1.5	chr1	53445875	53446277	(195510145)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	103098
30	5.5	0.0	0.0	chr1	53739163	53739200	(195217222)	+	(GCAGCCGCC)n	Simple_repeat	1	38	(0)	103661
22	16.5	3.6	1.7	chr1	54406918	54406973	(194549449)	+	(CCGACC)n	Simple_repeat	1	58	(0)	105001
12	13.9	3.5	10.0	chr1	54498347	54498404	(194458018)	+	(CTCCTGC)n	Simple_repeat	1	60	(0)	105224
258	25.0	9.2	2.3	chr1	54498616	54498746	(194457676)	C	MIR3	SINE/MIR	(14)	194	54	105225
1798	16.4	0.7	3.0	chr1	54640514	54640818	(194315604)	C	AluJb	SINE/Alu	(14)	298	1	105547
252	21.7	10.1	7.8	chr1	54775267	54775464	(194180958)	C	MLT1K	LTR/ERVL-MaLR	(401)	194	1	105876
2150	8.3	1.4	0.0	chr1	54792442	54792731	(194163691)	C	AluSp	SINE/Alu	(18)	295	2	105915
1790	9.9	11.1	0.0	chr1	54797381	54797652	(194158770)	+	AluSq2	SINE/Alu	1	306	(7)	105927
393	29.5	3.7	2.5	chr1	54797766	54797925	(194158497)	C	Charlie30a	DNA/hAT-Charlie	(540)	251	90	105928
13	21.2	1.8	7.0	chr1	54797929	54797984	(194158438)	+	(CCT)n	Simple_repeat	1	57	(0)	105929
428	30.9	2.2	1.0	chr1	54828001	54828230	(194128192)	+	L1M5	LINE/L1	4044	4277	(1869)	105986
1680	15.5	0.7	4.6	chr1	54828326	54828629	(194127793)	C	AluJb	SINE/Alu	(20)	292	1	105987
212	34.0	7.8	0.9	chr1	54887691	54887797	(194068625)	C	MIRb	SINE/MIR	(54)	214	100	106109
226	32.8	11.9	2.5	chr1	54950096	54950292	(194006130)	C	L2	LINE/L2	(553)	2866	2649	106212
191	24.4	4.2	0.0	chr1	54950486	54950530	(194005892)	+	L2b	LINE/L2	3311	3357	(18)	106213
13	16.5	0.0	5.3	chr1	55215174	55215211	(193741211)	+	(CGCGC)n	Simple_repeat	1	38	(0)	106639
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
17	22.8	1.3	6.6	chr1	55425747	55425821	(193530601)	+	(CCCT)n	Simple_repeat	1	76	(0)	107088
17	9.2	5.7	0.0	chr1	55425788	55425822	(193530600)	+	(CCTTC)n	Simple_repeat	1	37	(0)	107089
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
19	16.7	3.4	4.9	chr1	56645326	56645384	(192311038)	+	(GGC)n	Simple_repeat	1	61	(0)	109245
18	26.9	1.4	2.8	chr1	56645567	56645637	(192310785)	+	G-rich	Low_complexity	1	72	(0)	109246
248	29.3	5.4	3.1	chr1	56645692	56645853	(192310569)	+	MIR3	SINE/MIR	22	187	(21)	109247
17498	15.9	3.8	1.0	chr1	57682374	57684946	(191271476)	+	L1PA16	LINE/L1	7	2672	(3811)	111324
59	1.8	0.0	0.0	chr1	57739427	57739484	(191216938)	+	(CTCCC)n	Simple_repeat	1	58	(0)	111422
1937	11.4	0.0	2.3	chr1	57739487	57739748	(191216674)	C	AluSz	SINE/Alu	(52)	260	5	111423
4481	21.8	8.0	3.8	chr1	58539707	58540979	(190415443)	+	L1MEc	LINE/L1	139	1469	(4931)	113049
14	19.4	2.3	2.3	chr1	58546475	58546517	(190409905)	+	(TCCCC)n	Simple_repeat	1	44	(0)	113060
1282	32.7	5.2	2.7	chr1	58720738	58721165	(190235257)	C	L2a	LINE/L2	(189)	3186	2771	113383
40	0.0	2.6	0.0	chr1	58721166	58721203	(190235219)	+	(TG)n	Simple_repeat	1	39	(0)	113384
215	27.2	17.4	0.9	chr1	58903525	58903639	(190052783)	C	MIRb	SINE/MIR	(12)	256	119	113783
12	12.0	0.0	6.5	chr1	58903668	58903698	(190052724)	+	(GGCCG)n	Simple_repeat	1	31	(0)	113784
75	13.4	1.5	1.4	chr1	59237217	59237353	(189719069)	+	A-rich	Low_complexity	1	139	(0)	114498
12	17.7	5.0	2.4	chr1	59237483	59237522	(189718900)	+	(TGAA)n	Simple_repeat	1	42	(0)	114499
290	30.6	3.4	0.0	chr1	59237526	59237610	(189718812)	C	MIRb	SINE/MIR	(11)	257	170	114500
661	23.2	7.6	2.0	chr1	59237604	59237801	(189718621)	+	L2a	LINE/L2	3213	3422	(4)	114501
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
5049	8.5	3.9	1.3	chr1	59558298	59559412	(189397010)	C	MER11A	LTR/ERVK	(0)	1266	1	115077
2404	27.8	13.1	2.7	chr1	59578805	59580317	(189376105)	+	L2a	LINE/L2	1711	3421	(5)	115110
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
17	18.5	0.0	0.0	chr1	59814721	59814751	(189141671)	+	(C)n	Simple_repeat	1	31	(0)	115494
3353	22.5	11.0	8.6	chr1	59895781	59896525	(189059897)	C	L1MC4	LINE/L1	(849)	7193	6463	115599
337	33.6	3.0	4.4	chr1	59896739	59896875	(189059547)	C	L1ME4a	LINE/L1	(19)	6105	5971	115601
479	28.9	11.1	0.0	chr1	60081960	60082184	(188874238)	C	MIR	SINE/MIR	(6)	256	4	115956
527	36.8	0.8	6.0	chr1	60082185	60082281	(188874141)	+	MIR	SINE/MIR	161	255	(7)	115955
392	38.5	10.2	4.1	chr1	60082625	60083065	(188873357)	C	L2c	LINE/L2	(7)	3380	2910	115957
372	26.8	13.7	2.1	chr1	60991232	60991418	(187965004)	+	MIRc	SINE/MIR	20	231	(37)	117470
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
41	24.9	2.5	0.0	chr1	61082191	61082308	(187874114)	+	(GAGC)n	Simple_repeat	1	121	(0)	117647
16	18.9	0.0	0.0	chr1	61082351	61082380	(187874042)	+	(C)n	Simple_repeat	1	30	(0)	117648
22	19.3	6.8	4.5	chr1	61082380	61082482	(187873940)	+	(CGCGG)n	Simple_repeat	1	110	(0)	117649
62	0.0	0.0	0.0	chr1	61391436	61391488	(187564934)	+	(AC)n	Simple_repeat	1	53	(0)	118076
16	19.3	0.0	8.1	chr1	61742354	61742415	(187214007)	+	(CCCGCCC)n	Simple_repeat	1	62	(0)	118746
14	18.2	0.0	4.9	chr1	61742652	61742692	(187213730)	+	(GCCC)n	Simple_repeat	1	41	(0)	118747
191	32.3	10.4	1.2	chr1	61743359	61743524	(187212898)	+	L2c	LINE/L2	3200	3382	(5)	118748
358	34.3	1.7	3.3	chr1	61816236	61816416	(187140006)	C	MIR	SINE/MIR	(34)	228	51	118919
705	7.3	3.0	0.0	chr1	61816420	61816515	(187139907)	+	U6	snRNA	2	100	(7)	118920
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
442	27.9	9.0	4.3	chr1	63746613	63746844	(185209578)	C	MIRc	SINE/MIR	(0)	268	25	122617
911	28.6	7.9	1.2	chr1	63954163	63954494	(185001928)	C	MLT1J	LTR/ERVL-MaLR	(156)	356	1	123009
380	29.6	9.4	0.0	chr1	64097639	64097763	(184858659)	C	MIRc	SINE/MIR	(107)	161	24	123302
1938	15.7	1.0	0.3	chr1	64247584	64247883	(184708539)	+	AluJr	SINE/Alu	2	303	(9)	123547
1776	12.7	11.5	8.0	chr1	64247884	64248093	(184708329)	+	MSTB1	LTR/ERVL-MaLR	203	432	(0)	123546
12	10.3	6.1	2.9	chr1	64494020	64494052	(184462370)	+	G-rich	Low_complexity	1	35	(0)	123996
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	18.9	2.8	0.0	chr1	64745015	64745050	(184211372)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	124431
25	25.0	3.5	1.1	chr1	64745175	64745261	(184211161)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	124432
266	18.8	0.9	0.0	chr1	64745611	64745674	(184210748)	C	MIR1_Amn	SINE/MIR	(89)	141	70	124433
21	18.1	0.0	8.2	chr1	64966524	64966596	(183989826)	+	(CCGCC)n	Simple_repeat	1	73	(0)	124796
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
12	15.3	3.5	0.0	chr1	65066511	65066539	(183889883)	+	(CCCT)n	Simple_repeat	1	30	(0)	125012
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
12	16.8	0.0	0.0	chr1	65066925	65066951	(183889471)	+	(CCCCT)n	Simple_repeat	1	27	(0)	125014
15	7.5	0.0	6.2	chr1	65067136	65067167	(183889255)	+	(GGCCC)n	Simple_repeat	1	32	(0)	125015
17	7.9	0.0	0.0	chr1	65147483	65147509	(183808913)	+	(GGAGT)n	Simple_repeat	1	27	(0)	125211
12	22.0	2.7	0.0	chr1	65148891	65148927	(183807495)	+	(CCGTACC)n	Simple_repeat	1	38	(0)	125213
17	26.4	3.4	4.4	chr1	65309246	65309333	(183647089)	+	(CCCT)n	Simple_repeat	1	91	(0)	125552
14	4.3	4.2	0.0	chr1	65309511	65309534	(183646888)	+	(CTCC)n	Simple_repeat	1	25	(0)	125553
364	24.8	12.3	4.8	chr1	66663002	66663166	(182293256)	+	MER102a	DNA/hAT-Charlie	37	215	(115)	127575
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
13	12.2	8.3	0.0	chr1	66930267	66930302	(182026120)	+	(GGCAGC)n	Simple_repeat	1	39	(0)	127982
24	13.6	2.4	0.0	chr1	67086936	67086976	(181869446)	+	(TG)n	Simple_repeat	1	42	(0)	128195
5364	11.3	0.2	0.9	chr1	67087139	67087923	(181868499)	+	LTR17	LTR/ERV1	1	780	(0)	128196
5321	10.3	3.0	0.7	chr1	67147866	67148627	(181807795)	C	LTR17	LTR/ERV1	(0)	780	1	128316
547	29.8	5.1	2.8	chr1	67692290	67692571	(181263851)	+	Charlie8	DNA/hAT-Charlie	45	317	(13)	129420
245	28.4	4.9	4.1	chr1	67692656	67692776	(181263646)	C	MER5A	DNA/hAT-Charlie	(6)	183	62	129421
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
358	30.0	4.0	0.0	chr1	67883175	67883294	(181073128)	C	L2a	LINE/L2	(4)	3422	3298	129758
3768	9.8	7.8	1.2	chr1	68392126	68392789	(180563633)	C	LTR17	LTR/ERV1	(72)	708	1	130581
4927	13.4	1.7	1.4	chr1	68909601	68910370	(180046052)	+	LTR1F	LTR/ERV1	1	772	(0)	131304
35	0.0	0.0	0.0	chr1	72282595	72282627	(176673795)	+	(T)n	Simple_repeat	1	33	(0)	136018
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
16	18.7	0.0	4.3	chr1	75136980	75137025	(173819397)	+	G-rich	Low_complexity	1	46	(0)	139576
13	34.5	0.0	0.0	chr1	75137129	75137186	(173819236)	+	(CTCGTC)n	Simple_repeat	1	58	(0)	139577
18	12.0	0.0	5.0	chr1	75616022	75616061	(173340361)	+	(CGGCT)n	Simple_repeat	1	40	(0)	140186
23	22.0	3.2	0.0	chr1	75616111	75616185	(173340237)	+	(TGC)n	Simple_repeat	1	77	(0)	140187
15	22.0	0.0	2.3	chr1	75616217	75616291	(173340131)	+	(CCACCCC)n	Simple_repeat	1	73	(0)	140188
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
1596	25.7	12.2	1.2	chr1	77262254	77262922	(171693500)	+	L2b	LINE/L2	369	1121	(2298)	142584
58	6.5	0.0	1.2	chr1	77262923	77263005	(171693417)	+	(CTCCC)n	Simple_repeat	1	83	(0)	142585
1695	16.9	1.1	0.4	chr1	77263015	77263280	(171693142)	C	AluJb	SINE/Alu	(38)	274	7	142586
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
16	0.0	0.0	0.0	chr1	77779447	77779464	(171176958)	+	(T)n	Simple_repeat	1	18	(0)	143483
286	23.7	9.3	6.1	chr1	78003766	78003994	(170952428)	+	L1ME4a	LINE/L1	5884	6120	(4)	143905
349	29.1	10.9	2.1	chr1	78594201	78594533	(170361889)	+	L1M5	LINE/L1	4408	4773	(1373)	144790
4128	12.1	0.9	2.3	chr1	78594537	78595179	(170361243)	+	MER51A	LTR/ERV1	1	634	(0)	144791
5617	13.8	0.8	0.2	chr1	80109527	80110757	(168845665)	C	L1PA16	LINE/L1	(0)	6166	4929	146742
317	2.8	0.0	0.0	chr1	80110758	80110793	(168845629)	C	MER11A	LTR/ERVK	(0)	1266	1231	146743
3655	7.1	3.1	1.3	chr1	80110794	80111641	(168844781)	C	MER11A	LTR/ERVK	(166)	1100	1	146743
47	28.1	2.7	3.1	chr1	80520936	80521123	(168435299)	+	G-rich	Low_complexity	1	193	(0)	147301
182	31.1	2.4	3.3	chr1	80521258	80521358	(168435064)	+	MER5B	DNA/hAT-Charlie	61	161	(28)	147302
2192	10.6	1.1	0.0	chr1	82276836	82277117	(166679305)	C	AluSx1	SINE/Alu	(27)	285	1	149584
7314	23.3	5.4	3.0	chr1	82777456	82780772	(166175650)	+	MER66-int	LTR/ERV1	15	3413	(3263)	150282
426	15.9	0.0	0.0	chr1	83895653	83895721	(165060701)	C	MIR	SINE/MIR	(115)	147	79	151785
33	23.4	2.6	5.0	chr1	84299474	84299594	(164656828)	+	(CA)n	Simple_repeat	1	118	(0)	152330
23	13.5	0.0	0.0	chr1	84299658	84299698	(164656724)	+	(TATA)n	Simple_repeat	1	41	(0)	152331
20	15.7	7.9	3.7	chr1	84505927	84506006	(164450416)	+	(CCCG)n	Simple_repeat	1	83	(0)	152615
13	14.7	3.3	0.0	chr1	84506304	84506333	(164450089)	+	GA-rich	Low_complexity	1	31	(0)	152616
12	16.9	0.0	0.0	chr1	84620578	84620604	(164335818)	+	(CTTC)n	Simple_repeat	1	27	(0)	152805
18	19.6	0.0	4.0	chr1	84621094	84621143	(164335279)	+	G-rich	Low_complexity	1	50	(0)	152806
29	0.0	0.0	0.0	chr1	84621265	84621289	(164335133)	+	(TG)n	Simple_repeat	1	25	(0)	152807
392	21.8	6.3	6.3	chr1	84621307	84621497	(164334925)	C	L1ME4a	LINE/L1	(0)	6124	5934	152808
13	23.3	2.5	0.0	chr1	84690281	84690320	(164266102)	+	(CGCC)n	Simple_repeat	1	41	(0)	152919
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
2395	17.1	8.7	1.5	chr1	84764976	84765443	(164190979)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	153043
18	7.5	0.0	0.0	chr1	84893245	84893272	(164063150)	+	(GCCCC)n	Simple_repeat	1	28	(0)	153270
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
17	11.3	0.0	0.0	chr1	85201664	85201692	(163754730)	+	(GCG)n	Simple_repeat	1	29	(0)	153785
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
17	10.4	0.0	3.0	chr1	85276551	85276583	(163679839)	+	(CGACG)n	Simple_repeat	1	33	(0)	153916
12	16.3	2.8	2.7	chr1	85276616	85276651	(163679771)	+	(AGGCGC)n	Simple_repeat	1	37	(0)	153917
20	11.6	0.0	0.0	chr1	86030735	86030763	(162925659)	+	(T)n	Simple_repeat	1	29	(0)	155069
775	19.9	0.0	0.8	chr1	86030767	86030897	(162925525)	C	AluJb	SINE/Alu	(182)	130	1	155070
10822	11.8	2.0	0.4	chr1	86376886	86378486	(162577936)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	155517
364	31.9	8.2	2.1	chr1	86812290	86812529	(162143893)	+	MamGypsy2-I	LTR/Gypsy	48	303	(3863)	156139
237	8.9	2.2	2.2	chr1	86812738	86812783	(162143639)	+	MADE1	DNA/TcMar-Mariner	1	46	(34)	156140
293	27.8	21.8	0.0	chr1	86812822	86813015	(162143407)	C	MIRb	SINE/MIR	(7)	261	14	156141
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
10004	10.9	4.5	3.1	chr1	87012594	87014151	(161942271)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	156479
16	16.9	8.3	3.9	chr1	87331365	87331436	(161624986)	+	(CTCCCGT)n	Simple_repeat	1	78	(0)	156912
15	15.5	0.0	5.0	chr1	87331556	87331595	(161624827)	+	G-rich	Low_complexity	1	40	(0)	156913
19	23.8	3.8	3.7	chr1	87331621	87331699	(161624723)	+	GA-rich	Low_complexity	1	82	(0)	156914
12011	13.4	1.2	0.8	chr1	88053309	88055085	(160901337)	C	L1M1	LINE/L1	(5324)	2241	459	157971
834	33.0	6.3	7.7	chr1	88631252	88631987	(160324435)	C	L2	LINE/L2	(885)	2534	1810	158708
3201	10.2	19.2	3.6	chr1	88892400	88892769	(160063653)	C	MER51A	LTR/ERV1	(1)	633	146	159174
38	0.0	0.0	0.0	chr1	88892770	88892802	(160063620)	+	(GT)n	Simple_repeat	1	33	(0)	159175
3201	10.2	19.2	3.6	chr1	88892803	88892876	(160063546)	C	MER51A	LTR/ERV1	(489)	145	86	159174
2807	3.9	0.0	1.3	chr1	88892877	88893185	(160063237)	C	AluY	SINE/Alu	(6)	305	1	159176
4633	8.4	2.2	2.3	chr1	89437866	89438984	(159517438)	+	MER11A	LTR/ERVK	1	1266	(0)	159854
19501	14.3	2.2	2.1	chr1	89472662	89479459	(159476963)	+	L1PA11	LINE/L1	1	7609	(0)	159909
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
9667	11.0	3.7	3.9	chr1	90139115	90140697	(158815725)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	160911
15	8.5	4.7	6.7	chr1	90851702	90851744	(158104678)	+	(GCCCC)n	Simple_repeat	1	45	(0)	161860
2125	10.6	0.7	0.3	chr1	90949996	90950278	(158006144)	+	AluSx	SINE/Alu	1	284	(28)	161992
18	10.4	0.0	0.0	chr1	90950279	90950308	(158006114)	+	(GGAGG)n	Simple_repeat	3	32	(0)	161993
48	2.1	0.0	0.0	chr1	90950310	90950357	(158006065)	+	(AAAAG)n	Simple_repeat	1	48	(0)	161994
12	18.1	0.0	3.0	chr1	90950377	90950409	(158006013)	+	(TTGTTA)n	Simple_repeat	1	33	(0)	161995
443	31.0	0.5	1.1	chr1	90950562	90950747	(158005675)	+	L1MB5	LINE/L1	2455	2639	(3507)	161996
829	18.8	7.1	7.5	chr1	90986201	90986453	(157969969)	+	L1MC3	LINE/L1	7343	7594	(191)	162062
19	24.2	0.0	0.0	chr1	91387932	91387975	(157568447)	+	GA-rich	Low_complexity	1	44	(0)	162638
1870	24.6	5.9	2.0	chr1	91387978	91388430	(157567992)	+	MER21C	LTR/ERVL	392	863	(75)	162635
28	11.2	0.0	0.0	chr1	91853260	91853299	(157103123)	+	(A)n	Simple_repeat	1	40	(0)	163348
2048	14.0	0.5	8.9	chr1	91853498	91853731	(157102691)	+	L1MA8	LINE/L1	5736	5952	(339)	163349
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
17	17.2	0.0	7.5	chr1	91886335	91886345	(157070077)	+	(CTC)n	Simple_repeat	3	53	(0)	163410
38	0.0	0.0	2.7	chr1	92030450	92030486	(156925936)	+	(TG)n	Simple_repeat	1	37	(0)	163749
22	7.3	0.0	0.0	chr1	92030487	92030515	(156925907)	+	(AG)n	Simple_repeat	1	29	(0)	163750
1904	15.6	11.8	0.0	chr1	92657702	92658066	(156298356)	C	MSTA	LTR/ERVL-MaLR	(14)	414	1	164832
7896	13.6	2.4	1.3	chr1	92658067	92660231	(156296191)	+	L1PB4	LINE/L1	4671	6854	(5)	164829
645	16.2	0.0	22.9	chr1	92666307	92666590	(156289832)	+	AluJb	SINE/Alu	71	289	(23)	164840
33	8.5	0.0	0.0	chr1	92666591	92666640	(156289782)	+	(GGGAG)n	Simple_repeat	1	50	(0)	164841
27	18.2	4.2	5.0	chr1	92666637	92666732	(156289690)	+	A-rich	Low_complexity	1	100	(0)	164842
6304	8.2	18.6	0.8	chr1	92723333	92724371	(156232051)	+	MER11A	LTR/ERVK	1	1266	(0)	164930
1671	25.7	8.1	9.9	chr1	92724417	92724525	(156231897)	+	L1MEc	LINE/L1	45	139	(6261)	164931
1879	19.0	0.0	0.0	chr1	92724526	92724820	(156231602)	+	AluJb	SINE/Alu	1	295	(17)	164932
16	26.7	0.0	5.7	chr1	92961519	92961588	(155994834)	+	(CCCGG)n	Simple_repeat	1	70	(0)	165428
579	16.7	0.9	0.9	chr1	93123851	93123959	(155832463)	C	L1MC1	LINE/L1	(81)	6252	6144	165760
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
972	12.1	0.0	1.4	chr1	93181035	93181174	(155775248)	+	FLAM_C	SINE/Alu	1	138	(5)	165856
27	0.0	0.0	0.0	chr1	93346087	93346112	(155610310)	+	(GCAGCG)n	Simple_repeat	1	26	(0)	166155
23	15.9	2.0	1.9	chr1	93346157	93346207	(155610215)	+	(GGC)n	Simple_repeat	1	52	(0)	166156
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
871	23.3	5.7	7.4	chr1	93478877	93479026	(155477396)	C	Charlie13a	DNA/hAT-Charlie	(541)	973	824	166379
7198	6.7	13.9	3.1	chr1	93479027	93480151	(155476271)	C	MER11A	LTR/ERVK	(0)	1266	1	166380
14	15.4	6.7	2.1	chr1	93680930	93680974	(155275448)	+	(CCTTC)n	Simple_repeat	1	48	(0)	166665
14	18.6	2.7	0.0	chr1	93681782	93681818	(155274604)	+	(GCTCCG)n	Simple_repeat	1	38	(0)	166666
15	12.2	0.0	0.0	chr1	93909201	93909227	(155047195)	+	(GCGG)n	Simple_repeat	1	27	(0)	167023
18	30.7	1.3	2.5	chr1	93909334	93909412	(155047010)	+	(CGG)n	Simple_repeat	1	80	(0)	167024
11129	16.1	3.2	4.1	chr1	93955287	93957123	(154999299)	C	L1MA4A	LINE/L1	(4196)	3370	1544	167072
483	24.5	6.3	5.2	chr1	94210281	94210452	(154745970)	C	MER5B	DNA/hAT-Charlie	(1)	177	4	167447
3663	7.2	0.8	0.6	chr1	94444820	94445298	(154511124)	+	MER9a3	LTR/ERVK	33	512	(0)	167807
2802	9.1	5.8	0.2	chr1	94445299	94445706	(154510716)	+	HERVK9-int	LTR/ERVK	1	432	(5589)	167807
23697	5.8	1.1	0.3	chr1	94445706	94448660	(154507762)	+	HERVK9-int	LTR/ERVK	953	3931	(2090)	167807
276	34.9	4.5	1.6	chr1	94542256	94542383	(154414039)	+	MIRc	SINE/MIR	50	181	(87)	167942
40	12.8	3.9	0.0	chr1	94820301	94820377	(154136045)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	168365
11	18.1	2.4	4.8	chr1	94927015	94927055	(154029367)	+	(GGCGCG)n	Simple_repeat	1	42	(0)	168516
13	23.7	1.9	3.7	chr1	94927275	94927327	(154029095)	+	(CCCGCC)n	Simple_repeat	1	54	(0)	168517
31	22.1	2.0	4.8	chr1	95234014	95234115	(153722307)	+	(GCCCC)n	Simple_repeat	1	104	(0)	169060
17	18.9	2.9	7.0	chr1	96721667	96721735	(152234687)	+	(CGC)n	Simple_repeat	1	71	(0)	171072
39	13.7	1.3	2.5	chr1	98909052	98909129	(150047293)	+	GA-rich	Low_complexity	1	79	(0)	174086
49	15.8	2.1	0.0	chr1	98909213	98909307	(150047115)	+	(CCCCT)n	Simple_repeat	1	97	(0)	174087
19	19.7	0.0	3.9	chr1	98909298	98909348	(150047074)	+	(CTTT)n	Simple_repeat	1	51	(0)	174088
1624	20.7	2.5	3.5	chr1	98940113	98940478	(150015944)	C	MLT1A	LTR/ERVL-MaLR	(11)	363	2	174144
560	38.1	8.7	3.6	chr1	98940511	98941336	(150015086)	C	L2	LINE/L2	(508)	2911	2040	174145
10807	4.3	0.3	3.0	chr1	99856462	99857864	(149098558)	C	SVA_C	Retroposon/SVA	(18)	1366	1	175491
5195	9.0	9.7	3.6	chr1	100263768	100264863	(148691559)	+	MER11A	LTR/ERVK	1	1266	(0)	176272
3777	20.8	6.8	6.8	chr1	100309264	100310478	(148645944)	+	L1ME3E	LINE/L1	38	1252	(5148)	176363
423	30.9	10.7	4.0	chr1	100749774	100750026	(148206396)	+	LTR81C	LTR/Gypsy	211	482	(671)	176998
351	38.2	5.6	0.0	chr1	100750009	100750160	(148206262)	+	LTR81C	LTR/Gypsy	777	937	(413)	176998
358	35.0	8.3	5.3	chr1	101438709	101439257	(147517165)	C	L2c	LINE/L2	(92)	3295	2732	178037
65	17.9	0.0	3.5	chr1	101701629	101701770	(147254652)	+	(TTCCC)n	Simple_repeat	1	142	(0)	178384
2097	10.8	0.0	1.4	chr1	101701777	101702053	(147254369)	C	AluSx1	SINE/Alu	(39)	273	1	178385
4309	9.7	4.1	0.3	chr1	102553999	102554611	(146401811)	+	MER11A	LTR/ERVK	630	1266	(0)	179447
3679	21.2	5.4	3.2	chr1	102554612	102555333	(146401089)	+	LTR1D1	LTR/ERV1	161	899	(0)	179446
15	17.7	2.0	5.9	chr1	103107243	103107318	(145849104)	+	(TCCC)n	Simple_repeat	1	73	(0)	180087
16	15.7	2.2	4.3	chr1	103108548	103108593	(145847829)	+	(CCCGCT)n	Simple_repeat	1	47	(0)	180088
15	21.9	0.0	2.3	chr1	103108708	103108751	(145847671)	+	(CCCACCT)n	Simple_repeat	1	44	(0)	180089
1340	20.9	10.5	0.0	chr1	103312607	103312903	(145643519)	+	L1PA16	LINE/L1	5820	6151	(15)	180346
2609	21.9	4.2	9.7	chr1	104295540	104296301	(144660121)	+	MER50	LTR/ERV1	1	718	(16)	181556
252	28.4	5.1	4.4	chr1	106607227	106607372	(142349050)	C	L2a	LINE/L2	(44)	3382	3215	184250
290	35.1	4.5	6.3	chr1	106607570	106607727	(142348695)	+	L2b	LINE/L2	3221	3375	(0)	184251
22	16.6	0.0	2.0	chr1	107140111	107140159	(141816263)	+	(AGCAGC)n	Simple_repeat	1	49	(0)	185027
1341	26.0	8.7	6.2	chr1	108609198	108609725	(140346697)	C	L2a	LINE/L2	(5)	3421	2925	187008
2227	10.2	2.8	2.0	chr1	108609726	108610075	(140346347)	+	L1PA10	LINE/L1	5815	6167	(1)	187009
9543	12.1	4.6	0.5	chr1	108784578	108786087	(140170335)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	6	187319
2223	11.2	0.3	0.6	chr1	109100807	109101119	(139855303)	C	AluJb	SINE/Alu	(0)	312	1	187986
24	17.7	0.0	0.0	chr1	109250115	109250161	(139706261)	+	(GCT)n	Simple_repeat	1	47	(0)	188307
19	11.3	10.2	1.5	chr1	109485229	109485287	(139471135)	+	G-rich	Low_complexity	1	65	(0)	188670
4889	8.2	1.3	2.4	chr1	109702615	109703645	(139252777)	+	MER11A	LTR/ERVK	1	1266	(0)	188981
4754	8.6	1.8	1.9	chr1	109708621	109709643	(139246779)	+	MER11A	LTR/ERVK	1	1266	(0)	188981
566	7.9	0.0	0.0	chr1	109709644	109709716	(139246706)	+	LTR10C	LTR/ERV1	519	591	(0)	188982
13	18.7	7.0	0.0	chr1	109985178	109985220	(138971202)	+	G-rich	Low_complexity	1	46	(0)	189393
15	17.7	2.6	0.0	chr1	110210231	110210268	(138746154)	+	(GCGCC)n	Simple_repeat	1	39	(0)	189740
17	22.1	0.0	5.2	chr1	110210799	110210856	(138745566)	+	(CCGCC)n	Simple_repeat	1	58	(0)	189741
13	25.9	0.0	8.6	chr1	110674722	110674802	(138281620)	+	G-rich	Low_complexity	1	81	(0)	190557
337	20.6	6.1	1.1	chr1	111345918	111346010	(137610412)	C	MIRb	SINE/MIR	(73)	195	98	191398
12	4.7	4.5	0.0	chr1	111619749	111619770	(137336652)	+	(GCGT)n	Simple_repeat	1	23	(0)	191803
22	24.0	0.0	0.0	chr1	111619785	111619838	(137336584)	+	(CGC)n	Simple_repeat	1	54	(0)	191804
43	2.3	0.0	0.0	chr1	111619876	111619919	(137336503)	+	(GGAGGAGGT)n	Simple_repeat	1	44	(0)	191805
16	30.8	1.5	2.9	chr1	112881872	112881938	(136074484)	+	(GT)n	Simple_repeat	1	68	(0)	193976
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
2357	8.4	0.0	0.3	chr1	113066221	113066516	(135889906)	C	AluSq2	SINE/Alu	(18)	295	1	194411
4085	15.0	7.5	7.8	chr1	113066517	113066751	(135889671)	C	L1MB3	LINE/L1	(352)	5831	5567	194410
55	4.9	0.0	0.0	chr1	113066752	113066815	(135889607)	+	(CCTCCCTTCC)n	Simple_repeat	1	64	(0)	194412
4085	15.0	7.5	7.8	chr1	113066816	113066837	(135889585)	C	L1MB3	LINE/L1	(617)	5566	5565	194410
2059	12.2	1.7	0.0	chr1	113066838	113067123	(135889299)	C	AluSx	SINE/Alu	(21)	291	1	194413
2036	20.1	9.8	6.7	chr1	113217759	113218338	(135738084)	+	LTR36	LTR/ERV1	1	600	(11)	194686
2816	15.2	9.6	1.5	chr1	113303492	113304086	(135652336)	+	L1MB7	LINE/L1	5518	6165	(19)	194830
277	27.9	3.4	1.1	chr1	113389729	113389860	(135566562)	C	MIRc	SINE/MIR	(47)	161	30	194967
185	21.6	2.6	0.0	chr1	113389863	113389899	(135566523)	+	L2b	LINE/L2	3338	3375	(0)	194975
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
2643	9.5	0.3	0.3	chr1	113484253	113484622	(135471800)	C	L1PB1	LINE/L1	(0)	6151	5782	195102
76	9.8	0.0	0.0	chr1	113484636	113484746	(135471676)	+	(CCCTC)n	Simple_repeat	1	111	(0)	195103
1988	13.3	0.0	3.2	chr1	113484747	113485031	(135471391)	C	AluSc	SINE/Alu	(33)	276	1	195104
13	25.3	1.8	3.6	chr1	113812295	113812349	(135144073)	+	(GCCC)n	Simple_repeat	1	56	(0)	195565
685	28.4	4.3	9.6	chr1	114105039	114105238	(134851184)	C	L2a	LINE/L2	(126)	3300	3103	196065
209	19.5	0.0	0.0	chr1	114105218	114105258	(134851164)	C	L2a	LINE/L2	(833)	2586	2546	196065
228	32.8	5.6	2.5	chr1	114105620	114105741	(134850681)	C	MIRc	SINE/MIR	(45)	223	98	196067
16	25.7	1.8	1.7	chr1	114670043	114670115	(134286307)	+	(CCCCAG)n	Simple_repeat	1	73	(0)	197085
14	5.0	0.0	0.0	chr1	114757666	114757686	(134198736)	+	(CAC)n	Simple_repeat	1	21	(0)	197230
6184	9.5	3.1	4.2	chr1	114959438	114960163	(133996259)	C	L1MA3	LINE/L1	(0)	6305	5608	197520
15	14.9	3.3	7.9	chr1	115089297	115089357	(133867065)	+	(GGCCCCC)n	Simple_repeat	1	63	(0)	197674
240	27.5	18.1	3.0	chr1	115159787	115159921	(133796501)	C	MIR	SINE/MIR	(70)	192	33	197775
54	13.3	3.0	0.0	chr1	115160024	115160123	(133796299)	+	G-rich	Low_complexity	1	103	(0)	197776
649	28.3	2.7	1.1	chr1	115491609	115491790	(133464632)	+	MIR	SINE/MIR	56	240	(22)	198262
478	23.8	10.4	0.0	chr1	115491833	115491979	(133464443)	+	MER5A	DNA/hAT-Charlie	26	189	(0)	198263
852	31.1	1.1	0.4	chr1	115546318	115546582	(133409840)	C	MER102c	DNA/hAT-Charlie	(64)	267	1	198345
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
13	29.4	2.1	7.1	chr1	116168120	116168216	(132788206)	+	GA-rich	Low_complexity	1	99	(0)	199253
4168	18.0	2.6	13.5	chr1	116239771	116240795	(132715627)	+	MER21A	LTR/ERVL	1	902	(29)	199375
230	32.2	1.1	1.1	chr1	116240829	116240919	(132715503)	+	MIR	SINE/MIR	167	257	(5)	199376
12	28.0	2.3	0.0	chr1	116373364	116373407	(132583015)	+	(CCTC)n	Simple_repeat	1	45	(0)	199614
257	26.0	3.7	4.6	chr1	116667016	116667124	(132289298)	+	MIR1_Amn	SINE/MIR	28	135	(95)	200065
38	4.2	0.0	3.8	chr1	116667517	116667569	(132288853)	+	(CCCGCTC)n	Simple_repeat	1	53	(0)	200066
12	28.6	0.0	6.9	chr1	116667571	116667642	(132288780)	+	(CCCCCG)n	Simple_repeat	1	72	(0)	200067
1017	15.4	1.6	2.1	chr1	116905120	116905311	(132051111)	+	MER53	DNA/hAT	2	192	(1)	200476
358	30.7	12.0	1.4	chr1	116905312	116905390	(132051032)	C	L3	LINE/CR1	(436)	3663	3585	200475
2455	7.8	0.0	1.6	chr1	116953850	116954157	(132002265)	C	AluSx1	SINE/Alu	(9)	303	1	200542
529	30.7	11.6	1.5	chr1	116954387	116954726	(132001696)	C	L4_C_Mam	LINE/RTE-X	(1270)	3868	3490	200539
16	22.7	5.2	3.7	chr1	117121531	117121613	(131834809)	+	(CCCGCCA)n	Simple_repeat	1	84	(0)	200776
1452	20.8	1.9	0.8	chr1	117200120	117200383	(131756039)	+	AluJo	SINE/Alu	1	267	(45)	200912
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
6365	7.5	1.3	6.8	chr1	117428797	117431187	(131525235)	C	SVA_F	Retroposon/SVA	(0)	1375	58	201298
1022	29.9	10.3	4.7	chr1	117979335	117980161	(130976261)	+	L2a	LINE/L2	2553	3425	(1)	202105
19	0.0	0.0	0.0	chr1	118474478	118474498	(130481924)	+	(CA)n	Simple_repeat	1	21	(0)	202807
10358	9.9	2.2	4.1	chr1	119181237	119182807	(129773615)	C	HERV17-int	LTR/ERV1	(7086)	1540	1	203709
1941	10.5	15.4	2.1	chr1	119182808	119183271	(129773151)	C	LTR17	LTR/ERV1	(0)	780	253	203709
2122	15.1	0.5	5.2	chr1	119183272	119183757	(129772665)	C	L1M3	LINE/L1	(730)	5582	5101	203711
15	16.4	2.9	0.0	chr1	119648153	119648186	(129308236)	+	(GCG)n	Simple_repeat	1	35	(0)	204334
57	3.4	0.0	0.0	chr1	119648189	119648248	(129308174)	+	(GCTG)n	Simple_repeat	1	60	(0)	204335
13	15.4	5.6	0.0	chr1	119712665	119712700	(129243722)	+	G-rich	Low_complexity	1	38	(0)	204434
19	10.5	0.0	0.0	chr1	120069416	120069446	(128886976)	+	(CGC)n	Simple_repeat	1	31	(0)	204943
2416	10.5	1.3	4.6	chr1	120385524	120385911	(128570511)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	205472
2280	24.9	0.6	3.4	chr1	143723998	143724529	(105231893)	C	MER87	LTR/ERV1	(22)	519	3	208236
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
233	29.0	4.1	0.0	chr1	145721641	145721733	(103234689)	C	MIRc	SINE/MIR	(135)	133	37	211410
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
13	19.2	6.1	1.9	chr1	145859802	145859850	(103096572)	+	(GGCTCG)n	Simple_repeat	1	52	(0)	211658
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
26	23.2	1.4	1.4	chr1	147600187	147600258	(101356164)	+	(CGC)n	Simple_repeat	1	73	(0)	214369
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
16	32.0	1.4	1.4	chr1	150876559	150876629	(98079793)	+	(CGC)n	Simple_repeat	1	72	(0)	220009
15	12.9	5.0	7.9	chr1	150926373	150926432	(98029990)	+	(CTTCCC)n	Simple_repeat	1	63	(0)	220139
11	19.4	5.3	7.6	chr1	150974454	150974528	(97981894)	+	(CGCCTCC)n	Simple_repeat	1	79	(0)	220231
28	16.0	2.6	5.1	chr1	150974727	150974803	(97981619)	+	(CCG)n	Simple_repeat	1	79	(0)	220232
16	13.2	0.0	2.9	chr1	150974800	150974834	(97981588)	+	(GCCGA)n	Simple_repeat	1	35	(0)	220233
12	15.3	3.5	0.0	chr1	151346696	151346724	(97609698)	+	(CAA)n	Simple_repeat	1	30	(0)	221009
53	0.0	0.0	0.0	chr1	151511436	151511483	(97444939)	+	(GCCCGA)n	Simple_repeat	1	48	(0)	221378
2884	13.7	5.5	1.5	chr1	151907955	151908832	(97047590)	+	MER61-int	LTR/ERV1	247	1272	(3945)	222090
12	27.2	2.3	0.0	chr1	151993623	151993666	(96962756)	+	(CCCGC)n	Simple_repeat	1	45	(0)	222236
197	33.0	0.9	4.3	chr1	152474859	152474975	(96481447)	+	L3	LINE/CR1	3904	4016	(83)	222842
13	21.8	0.0	6.2	chr1	152475168	152475215	(96481207)	+	GA-rich	Low_complexity	1	48	(0)	222843
302	26.3	5.0	2.1	chr1	152479945	152480041	(96476381)	+	L2b	LINE/L2	3267	3366	(9)	222846
23	6.7	3.6	7.0	chr1	152480055	152480109	(96476313)	+	GA-rich	Low_complexity	1	57	(0)	222847
55	4.9	0.0	0.0	chr1	152480111	152480173	(96476249)	+	(GAGGG)n	Simple_repeat	1	63	(0)	222848
3703	17.3	9.7	5.3	chr1	153471691	153472787	(95483635)	+	MER11B	LTR/ERVK	1	1236	(0)	224127
4806	23.5	6.7	5.2	chr1	153472791	153474206	(95482216)	C	ERV3-16A3_I-int	LTR/ERVL	(1224)	4002	2564	224126
2027	8.6	0.0	0.0	chr1	153519903	153520157	(95436265)	+	AluSg	SINE/Alu	2	256	(54)	224222
82	16.8	1.4	0.0	chr1	153520162	153520308	(95436114)	+	GA-rich	Low_complexity	1	149	(0)	224223
2813	7.3	5.1	3.1	chr1	153520310	153520732	(95435690)	C	MER4A1	LTR/ERV1	(39)	433	2	224221
618	23.7	8.9	3.5	chr1	153613708	153613908	(95342514)	C	MIRb	SINE/MIR	(17)	251	39	224402
1054	9.1	5.6	4.5	chr1	153658213	153658412	(95298010)	C	AluSx1	SINE/Alu	(0)	312	135	224486
13	13.1	0.0	0.0	chr1	153922689	153922713	(95033709)	+	(CGGG)n	Simple_repeat	1	25	(0)	225074
14	15.6	5.6	0.0	chr1	153922834	153922892	(95033530)	+	G-rich	Low_complexity	1	62	(0)	225075
23	15.5	0.0	0.0	chr1	153922913	153922955	(95033467)	+	(CGG)n	Simple_repeat	1	43	(0)	225076
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
4684	8.9	1.1	0.2	chr1	154047853	154048469	(94907953)	+	HERVK9-int	LTR/ERVK	1	623	(5398)	225338
15	28.9	2.7	2.6	chr1	154220842	154220916	(94735506)	+	G-rich	Low_complexity	1	77	(0)	225710
26	15.3	2.0	0.0	chr1	154220984	154221040	(94735382)	+	(GCG)n	Simple_repeat	1	58	(0)	225711
12	16.5	0.0	0.0	chr1	154221333	154221378	(94735044)	+	(GAGC)n	Simple_repeat	1	46	(0)	225712
18	24.8	5.6	0.0	chr1	154325451	154325521	(94630901)	+	(GCTCCCC)n	Simple_repeat	1	75	(0)	225936
14	24.9	3.9	0.0	chr1	154325494	154325545	(94630877)	+	(CCGCCG)n	Simple_repeat	1	54	(0)	225937
19	15.2	2.5	9.8	chr1	154325685	154325764	(94630658)	+	(CGAGG)n	Simple_repeat	1	82	(0)	225938
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
12	23.3	0.0	0.0	chr1	155562151	155562185	(93394237)	+	(ACCGAG)n	Simple_repeat	1	35	(0)	228299
32	13.5	0.0	3.2	chr1	155562416	155562477	(93393945)	+	(GGC)n	Simple_repeat	1	62	(0)	228300
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
4716	8.8	1.7	2.5	chr1	155642182	155643219	(93313203)	C	MER11A	LTR/ERVK	(0)	1266	1	228475
14	16.7	0.0	5.3	chr1	155688320	155688357	(93268065)	+	(GGC)n	Simple_repeat	1	38	(0)	228557
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
27	19.4	3.4	4.3	chr1	156053682	156053772	(92902650)	+	(CCCG)n	Simple_repeat	1	90	(0)	229382
40	4.5	0.0	0.0	chr1	156053813	156053858	(92902564)	+	(CTCCC)n	Simple_repeat	1	46	(0)	229383
11	13.2	5.7	2.7	chr1	156054978	156055012	(92901410)	+	(CGAGCGG)n	Simple_repeat	1	37	(0)	229385
19	9.2	2.9	0.0	chr1	156082822	156082856	(92873566)	+	(GGGGGCC)n	Simple_repeat	1	36	(0)	229435
20	19.1	1.7	3.4	chr1	156082887	156082944	(92873478)	+	(CGCTCCC)n	Simple_repeat	1	59	(0)	229436
2515	6.6	1.3	0.0	chr1	156457866	156458168	(92498254)	+	AluSg	SINE/Alu	2	308	(2)	230181
13	15.7	2.7	2.7	chr1	156500883	156500931	(92455491)	+	G-rich	Low_complexity	1	49	(0)	230238
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
11	24.1	0.0	0.0	chr1	156809543	156809576	(92146846)	+	(AGCCTC)n	Simple_repeat	1	34	(0)	230806
19	23.3	4.6	0.0	chr1	157993504	157993577	(90962845)	+	(GCGCGG)n	Simple_repeat	1	77	(0)	232476
13	18.9	2.8	0.0	chr1	158113627	158113662	(90842760)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	232694
4170	10.7	2.8	3.5	chr1	158980065	158981082	(89975340)	+	MER11A	LTR/ERVK	2	1266	(0)	233739
1336	14.8	2.5	6.6	chr1	158981083	158981220	(89975202)	C	L1PA15	LINE/L1	(335)	6600	6458	233738
844	25.4	18.8	1.0	chr1	159767033	159767433	(89188989)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	1	234723
4366	23.4	8.8	3.8	chr1	159767439	159767795	(89188627)	C	MLT1H2-int	LTR/ERVL-MaLR	(6)	1403	1050	234723
8297	3.8	0.0	0.0	chr1	159767796	159768763	(89187659)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	234724
13	21.9	1.9	5.6	chr1	159945550	159945602	(89010820)	+	(CTCCG)n	Simple_repeat	1	54	(0)	234978
1132	13.3	4.1	10.3	chr1	160162519	160162752	(88793670)	C	MER20	DNA/hAT-Charlie	(0)	219	1	235341
14	12.4	2.4	7.1	chr1	160205260	160205300	(88751122)	+	(TCC)n	Simple_repeat	1	42	(0)	235408
27	14.0	0.0	0.0	chr1	160205393	160205439	(88750983)	+	(GGC)n	Simple_repeat	1	47	(0)	235409
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
12	18.0	6.1	3.9	chr1	160400905	160400953	(88555469)	+	A-rich	Low_complexity	1	52	(0)	235701
12	12.6	0.0	3.6	chr1	161132482	161132509	(87823913)	+	(CGGCC)n	Simple_repeat	1	28	(0)	236930
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
662	1.3	0.0	0.0	chr1	161440822	161440896	(87515526)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237538
6636	9.6	15.8	0.8	chr1	161536702	161537776	(87418646)	+	MER11A	LTR/ERVK	1	1266	(0)	237685
6692	9.8	15.6	0.7	chr1	161618126	161619201	(87337221)	+	MER11A	LTR/ERVK	1	1266	(0)	237820
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
16	26.9	0.0	0.0	chr1	162561485	162561533	(86394889)	+	(CCGCGT)n	Simple_repeat	1	49	(0)	239383
13	19.8	0.0	2.7	chr1	162561644	162561680	(86394742)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	239384
13784	18.3	4.1	5.2	chr1	164351845	164356029	(84600393)	+	L1MA9	LINE/L1	3050	7202	(529)	241955
16	20.2	5.0	3.2	chr1	164558902	164558961	(84397461)	+	GA-rich	Low_complexity	1	63	(0)	242314
20	13.9	7.0	1.6	chr1	164559013	164559069	(84397353)	+	(CCCTCCT)n	Simple_repeat	1	61	(0)	242315
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
17	18.2	0.0	0.0	chr1	164559329	164559359	(84397063)	+	G-rich	Low_complexity	1	31	(0)	242317
19	21.7	1.6	3.2	chr1	164559584	164559651	(84396771)	+	(CCCCTC)n	Simple_repeat	1	66	(0)	242318
14	20.9	4.5	0.0	chr1	164651557	164651600	(84304822)	+	GA-rich	Low_complexity	1	46	(0)	242446
510	27.9	24.1	3.4	chr1	165142856	165143482	(83812940)	C	L2a	LINE/L2	(69)	3357	2612	243161
311	27.5	2.1	0.0	chr1	165143726	165143816	(83812606)	+	MIR3	SINE/MIR	106	198	(10)	243162
20	20.6	0.0	0.0	chr1	165649322	165649366	(83307056)	+	(CTTT)n	Simple_repeat	1	45	(0)	244024
37	17.9	4.7	2.7	chr1	165649349	165649455	(83306967)	+	(TCCC)n	Simple_repeat	1	112	(0)	244025
231	26.5	6.7	9.3	chr1	165649534	165649641	(83306781)	+	L1M5	LINE/L1	5825	5929	(244)	244026
22	19.5	0.0	0.0	chr1	166166688	166166734	(82789688)	+	(GCC)n	Simple_repeat	1	47	(0)	244900
19	17.7	0.0	6.9	chr1	166166779	166166836	(82789586)	+	(GCG)n	Simple_repeat	1	58	(0)	244901
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
15	13.2	4.4	4.3	chr1	166839901	166839945	(82116477)	+	G-rich	Low_complexity	1	47	(0)	245776
357	32.8	18.3	4.1	chr1	167095059	167095300	(81861122)	C	L2c	LINE/L2	(1)	3374	3091	246145
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
12	13.9	0.0	0.0	chr1	167220935	167220958	(81735464)	+	(CAG)n	Simple_repeat	1	24	(0)	246372
23	19.6	2.6	5.1	chr1	167221216	167221292	(81735130)	+	(CCG)n	Simple_repeat	1	79	(0)	246373
1029	10.1	22.2	1.6	chr1	167666789	167666970	(81289452)	+	MER30	DNA/hAT-Charlie	1	230	(0)	247098
20	31.8	0.9	5.1	chr1	167722117	167722232	(81234190)	+	(GCG)n	Simple_repeat	1	117	(0)	247194
308	22.4	12.7	14.3	chr1	167936971	167937179	(81019243)	C	L1MDb	LINE/L1	(5653)	756	552	247570
24	24.0	2.4	3.5	chr1	168136745	168136828	(80819594)	+	(GCC)n	Simple_repeat	1	86	(0)	247859
50	20.0	2.3	2.2	chr1	168136941	168137071	(80819351)	+	(CGCCC)n	Simple_repeat	1	134	(0)	247860
188	28.2	1.3	4.9	chr1	168137392	168137473	(80818949)	C	L2b	LINE/L2	(1)	3374	3296	247861
2145	12.7	0.3	0.7	chr1	168318814	168319121	(80637301)	C	AluSx1	SINE/Alu	(3)	309	3	248194
2070	17.0	10.3	3.6	chr1	168319133	168319602	(80636820)	C	L1MB8	LINE/L1	(1)	6177	5673	248195
13	17.7	5.3	0.0	chr1	169105812	169105849	(79850573)	+	(GCAGGA)n	Simple_repeat	1	40	(0)	249447
14	19.3	1.6	7.9	chr1	169106093	169106154	(79850268)	+	(CGCGCC)n	Simple_repeat	1	63	(0)	249448
28	3.0	2.9	0.0	chr1	169106609	169106642	(79849780)	+	(CCG)n	Simple_repeat	1	35	(0)	249449
22	0.0	0.0	0.0	chr1	169459906	169459929	(79496493)	+	(A)n	Simple_repeat	1	24	(0)	249961
12	19.6	0.0	0.0	chr1	169459929	169459957	(79496465)	+	GA-rich	Low_complexity	1	29	(0)	249962
614	29.6	2.0	0.6	chr1	170463479	170463649	(78492773)	+	MIRb	SINE/MIR	3	193	(75)	251344
20	0.0	0.0	0.0	chr1	171486108	171486129	(77470293)	+	(T)n	Simple_repeat	1	22	(0)	252820
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
13	13.2	0.0	0.0	chr1	172533420	172533444	(76422978)	+	(GAA)n	Simple_repeat	1	25	(0)	254354
673	32.5	11.5	1.3	chr1	173437417	173437883	(75518539)	C	L1M5	LINE/L1	(982)	5164	4644	255607
397	27.7	0.8	1.6	chr1	173437964	173438084	(75518338)	C	L1M5	LINE/L1	(1521)	4625	4506	255607
11996	8.9	0.4	0.2	chr1	173470157	173471734	(75484688)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	255650
43	23.6	1.3	5.2	chr1	173477142	173477294	(75479128)	+	(CCGGC)n	Simple_repeat	1	155	(0)	255658
1062	20.9	11.8	4.3	chr1	173608617	173608750	(75347672)	+	AluJr	SINE/Alu	123	280	(32)	255847
459	30.6	4.6	1.1	chr1	173609020	173609207	(75347215)	C	Tigger11a	DNA/TcMar-Tigger	(525)	210	16	255849
1697	19.9	1.9	1.9	chr1	173624211	173624517	(75331905)	+	AluJr	SINE/Alu	1	307	(5)	255865
1424	24.3	17.5	17.0	chr1	173974534	173975099	(74981323)	C	L2a	LINE/L2	(331)	3095	2406	256434
19640	11.8	4.9	5.2	chr1	174215470	174216445	(74739977)	+	L1MA3	LINE/L1	6727	7724	(0)	256909
549	24.2	0.0	0.0	chr1	174216632	174216763	(74739659)	C	L1MCa	LINE/L1	(4721)	1787	1656	256907
292	35.2	8.2	4.7	chr1	174216769	174217087	(74739335)	C	L2b	LINE/L2	(462)	2957	2627	256905
7566	5.2	13.0	3.8	chr1	174409131	174410275	(74546147)	+	MER11A	LTR/ERVK	1	1266	(0)	257175
10058	12.3	4.0	1.6	chr1	174410276	174413996	(74542426)	C	L1PA16	LINE/L1	(1056)	5793	1283	257174
4693	11.3	3.5	1.3	chr1	174782686	174783441	(74172981)	+	LTR17	LTR/ERV1	1	773	(7)	257678
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
14	14.2	3.2	0.0	chr1	178093445	178093475	(70862947)	+	A-rich	Low_complexity	1	32	(0)	262568
41	14.1	0.0	1.4	chr1	178093761	178093834	(70862588)	+	(GCCGCC)n	Simple_repeat	1	74	(0)	262569
14	21.1	0.0	6.1	chr1	178094013	178094061	(70862361)	+	(GGC)n	Simple_repeat	1	49	(0)	262570
14	15.8	0.0	5.1	chr1	178094065	178094103	(70862319)	+	(CCCAG)n	Simple_repeat	1	39	(0)	262571
14	19.3	6.4	0.0	chr1	178094104	178094109	(70862313)	+	(CCCCAG)n	Simple_repeat	3	50	(0)	262572
2079	13.3	7.2	1.1	chr1	178140822	178141178	(70815244)	C	MSTB	LTR/ERVL-MaLR	(12)	414	46	262651
28	8.1	0.0	0.0	chr1	178141179	178141218	(70815204)	+	(T)n	Simple_repeat	1	40	(0)	262652
2180	10.6	0.9	1.8	chr1	178141219	178141546	(70814876)	C	LTR17	LTR/ERV1	(455)	325	1	262653
17	27.9	0.0	6.1	chr1	178725437	178725450	(70230972)	+	G-rich	Low_complexity	1	18	(64)	263567
16	4.5	0.0	0.0	chr1	178725451	178725473	(70230949)	+	(GGGA)n	Simple_repeat	1	23	(0)	263568
17	27.9	0.0	6.1	chr1	178725474	178725518	(70230904)	+	G-rich	Low_complexity	19	82	(0)	263567
13	19.5	0.0	2.7	chr1	178726029	178726065	(70230357)	+	G-rich	Low_complexity	1	37	(0)	263569
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
2060	13.3	1.9	0.3	chr1	180217654	180217970	(68738452)	C	L1PA13	LINE/L1	(3)	6160	5839	266060
19	11.7	2.7	0.0	chr1	180229938	180229975	(68726447)	+	(GGCGGA)n	Simple_repeat	1	39	(0)	266083
22	15.5	0.0	0.0	chr1	180229990	180230032	(68726390)	+	(GCCCC)n	Simple_repeat	1	43	(0)	266084
17	14.8	3.8	1.2	chr1	180230210	180230254	(68726168)	+	G-rich	Low_complexity	1	46	(0)	266085
414	25.6	18.5	1.6	chr1	181178212	181178525	(67777897)	C	L2a	LINE/L2	(122)	3304	2926	267605
183	19.3	5.0	3.4	chr1	181178569	181178627	(67777795)	C	L2a	LINE/L2	(640)	2779	2720	267605
11397	8.6	1.4	0.6	chr1	181194024	181195585	(67760837)	+	THE1B-int	LTR/ERVL-MaLR	1	1574	(6)	267633
2351	13.2	1.9	2.5	chr1	181195591	181195956	(67760466)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	267633
4534	9.2	3.2	2.0	chr1	181254228	181255232	(67701190)	+	MER11A	LTR/ERVK	1	1266	(0)	267720
1083	27.9	13.6	4.5	chr1	182016065	182016616	(66939806)	C	LTR86C	LTR/ERVL	(3)	618	9	268722
4548	7.1	2.8	1.5	chr1	182045245	182046257	(66910165)	C	MER11A	LTR/ERVK	(0)	1266	1	268763
407	27.7	4.7	4.2	chr1	182614697	182614772	(66341650)	+	MIRc	SINE/MIR	191	268	(0)	269750
16	23.0	0.0	0.0	chr1	182614833	182614873	(66341549)	+	G-rich	Low_complexity	1	41	(0)	269752
11	19.1	2.1	6.2	chr1	182615102	182615148	(66341274)	+	(CGGCCG)n	Simple_repeat	1	48	(0)	269753
13	22.2	6.8	1.6	chr1	182839245	182839303	(66117119)	+	(GCCCTC)n	Simple_repeat	1	63	(0)	270133
54	11.6	2.8	2.7	chr1	183023087	183023194	(65933228)	+	(CCCTC)n	Simple_repeat	1	111	(0)	270460
14	11.3	3.5	0.0	chr1	183023367	183023395	(65933027)	+	(ACCCC)n	Simple_repeat	1	30	(0)	270461
250	26.3	6.3	5.6	chr1	183271329	183271453	(65684969)	+	L2c	LINE/L2	3025	3150	(237)	270827
271	23.4	1.5	0.0	chr1	183271531	183271594	(65684828)	C	MIR	SINE/MIR	(0)	262	198	270828
18	23.7	0.0	6.8	chr1	183472319	183472363	(65484059)	+	(CCCTCT)n	Simple_repeat	1	70	(0)	271188
17	18.8	0.0	0.0	chr1	183472364	183472394	(65484028)	+	(C)n	Simple_repeat	1	31	(0)	271189
12	5.5	0.0	0.0	chr1	183472602	183472620	(65483802)	+	(GCG)n	Simple_repeat	1	19	(0)	271190
204	22.7	8.5	6.2	chr1	184051201	184051280	(64905142)	+	L2	LINE/L2	2096	2177	(1242)	272013
41	4.1	1.9	1.9	chr1	184386769	184386820	(64569602)	+	(AC)n	Simple_repeat	1	53	(0)	272566
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
21	17.6	0.0	4.0	chr1	184387265	184387314	(64569108)	+	GA-rich	Low_complexity	1	50	(0)	272568
15	33.8	2.0	2.9	chr1	184387500	184387600	(64568822)	+	G-rich	Low_complexity	1	103	(0)	272569
1761	18.3	0.4	0.4	chr1	184392820	184393092	(64563330)	C	AluJb	SINE/Alu	(3)	309	37	272577
7703	6.2	15.1	0.6	chr1	184783329	184784409	(64172013)	+	MER11A	LTR/ERVK	1	1266	(0)	273224
15745	9.4	4.0	0.4	chr1	184814711	184816860	(64139562)	+	MER57-int	LTR/ERV1	5307	7535	(2)	273276
21	22.2	1.3	5.3	chr1	185317244	185317318	(63639104)	+	(GCC)n	Simple_repeat	1	76	(0)	274052
11455	16.6	7.7	5.5	chr1	186224285	186227756	(62728666)	+	MER41-int	LTR/ERV1	2765	5944	(2)	275298
3879	8.2	5.6	0.0	chr1	186227757	186228279	(62728143)	+	MER41A	LTR/ERV1	1	554	(0)	275298
2152	9.8	0.3	1.8	chr1	187106006	187106290	(61850132)	+	AluSc8	SINE/Alu	1	281	(30)	276563
1771	14.9	1.3	0.7	chr1	187106509	187106534	(61849888)	C	L1PA16	LINE/L1	(5)	6161	6137	276564
50	4.0	0.0	0.0	chr1	190478703	190478754	(58477668)	+	(TC)n	Simple_repeat	1	52	(0)	280953
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
18	14.7	4.3	2.0	chr1	197201312	197201358	(51755064)	+	(CCCCT)n	Simple_repeat	1	49	(0)	289611
57	21.8	2.0	2.0	chr1	197846022	197846207	(51110215)	+	(TTCCC)n	Simple_repeat	1	186	(0)	290430
1918	15.4	1.4	0.3	chr1	197846208	197846500	(51109922)	C	AluJb	SINE/Alu	(16)	296	1	290431
15	7.6	3.6	0.0	chr1	197902930	197902957	(51053465)	+	(CCCGC)n	Simple_repeat	1	29	(0)	290519
3109	18.0	2.3	1.5	chr1	198812909	198813523	(50142899)	+	Tigger2b_Pri	DNA/TcMar-Tigger	1	620	(448)	291717
3921	12.2	7.2	1.7	chr1	198813524	198814483	(50141939)	C	MER11A	LTR/ERVK	(0)	1266	1	291718
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
475	26.4	8.2	3.1	chr1	200621115	200621318	(48335104)	C	MIRb	SINE/MIR	(1)	261	53	294646
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
27	20.2	5.2	3.0	chr1	200738767	200738862	(48217560)	+	G-rich	Low_complexity	1	101	(0)	294913
14	15.9	0.0	0.0	chr1	200738938	200738965	(48217457)	+	(GCG)n	Simple_repeat	1	28	(0)	294914
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
26	8.8	1.9	5.5	chr1	200739621	200739674	(48216748)	+	(GCG)n	Simple_repeat	1	55	(0)	294917
220	32.3	1.0	6.8	chr1	201170595	201170697	(47785725)	C	L2b	LINE/L2	(7)	3419	3310	295611
204	25.8	15.1	3.1	chr1	201171603	201171730	(47784692)	+	MIRc	SINE/MIR	58	203	(65)	295612
17	11.2	0.0	0.0	chr1	201573374	201573403	(47383019)	+	(GGAA)n	Simple_repeat	1	30	(0)	296291
451	26.9	0.0	0.0	chr1	201573629	201573736	(47382686)	+	MIR	SINE/MIR	155	262	(0)	296287
336	15.6	1.5	1.5	chr1	201573743	201573807	(47382615)	C	Charlie4z	DNA/hAT-Charlie	(17)	150	86	296292
478	27.9	5.7	13.5	chr1	202101138	202101501	(46854921)	+	L2b	LINE/L2	3054	3387	(0)	297285
33	6.0	5.8	0.0	chr1	202101587	202101638	(46854784)	+	(TC)n	Simple_repeat	1	55	(0)	297286
2240	13.6	0.0	0.0	chr1	202298978	202299279	(46657143)	+	AluSz	SINE/Alu	1	302	(10)	297644
278	32.7	0.9	3.8	chr1	202299497	202299650	(46656772)	+	L2c	LINE/L2	3248	3424	(2)	297645
236	32.9	5.3	9.0	chr1	203304936	203305169	(45651253)	C	L2c	LINE/L2	(57)	3330	3106	299384
234	19.7	2.7	13.4	chr1	203488188	203488233	(45468189)	+	MIR3	SINE/MIR	120	164	(44)	299694
2190	6.9	0.3	1.6	chr1	203488234	203488536	(45467886)	+	AluSx	SINE/Alu	1	299	(13)	299695
16	23.6	1.7	3.4	chr1	204073047	204073104	(44883318)	+	(CCCT)n	Simple_repeat	1	59	(0)	300927
11	16.4	5.9	0.0	chr1	204073214	204073247	(44883175)	+	(GAGCTCA)n	Simple_repeat	1	36	(0)	300928
12	12.8	8.8	0.0	chr1	204073560	204073593	(44882829)	+	(CCCAG)n	Simple_repeat	1	37	(0)	300929
18	11.9	10.1	4.0	chr1	204073626	204073694	(44882728)	+	(GCCGCGA)n	Simple_repeat	1	76	(0)	300930
12	11.1	0.0	8.6	chr1	204073645	204073661	(44882761)	+	(GCAGGA)n	Simple_repeat	1	51	(0)	300931
21	13.9	0.0	0.0	chr1	204073662	204073701	(44882721)	+	(GAGCCCC)n	Simple_repeat	1	40	(0)	300932
541	27.8	11.5	2.8	chr1	204189945	204190229	(44766193)	+	MER5C	DNA/hAT-Charlie	1	313	(0)	301153
15	18.5	4.7	0.0	chr1	204190389	204190431	(44765991)	+	(CCCCCGC)n	Simple_repeat	1	45	(0)	301154
12	13.1	0.0	9.8	chr1	205344084	205344124	(43612298)	+	(CCCCCG)n	Simple_repeat	1	41	(0)	303253
31	0.0	0.0	3.0	chr1	205504601	205504633	(43451789)	+	(TCC)n	Simple_repeat	1	33	(0)	303573
18	24.4	1.9	0.0	chr1	205568951	205569009	(43387413)	+	(GCCCC)n	Simple_repeat	1	60	(0)	303704
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
15	29.1	1.9	0.0	chr1	205631725	205631778	(43324644)	+	(CGG)n	Simple_repeat	1	55	(0)	303803
17	17.3	5.3	4.2	chr1	206556820	206556878	(42399544)	+	G-rich	Low_complexity	1	59	(0)	305297
1459	11.6	5.3	17.1	chr1	206612818	206613001	(42343421)	+	AluJb	SINE/Alu	1	132	(180)	305398
1072	23.6	9.6	4.1	chr1	206896090	206896403	(42060019)	C	MER58B	DNA/hAT-Charlie	(8)	333	1	305882
42	4.7	0.0	0.0	chr1	207320894	207320938	(41635484)	+	(CA)n	Simple_repeat	1	45	(0)	306484
15	15.3	2.6	2.6	chr1	207321816	207321853	(41634569)	+	(GCT)n	Simple_repeat	1	39	(0)	306485
1856	17.6	0.3	0.7	chr1	207426260	207426565	(41529857)	+	AluJb	SINE/Alu	1	305	(7)	306637
37	12.8	0.0	0.0	chr1	207426566	207426627	(41529795)	+	(GGGGA)n	Simple_repeat	1	62	(0)	306638
484	29.4	2.5	1.5	chr1	207426628	207426824	(41529598)	+	ERVL-E-int	LTR/ERVL	1373	1571	(4096)	306628
5126	17.9	5.4	4.0	chr1	207713422	207714534	(41241888)	C	LTR28C	LTR/ERV1	(0)	1129	1	307059
6397	11.1	6.2	0.6	chr1	207742195	207743985	(41212437)	+	HUERS-P3b-int	LTR/ERV1	750	2642	(4776)	307095
13	22.0	4.1	2.0	chr1	208243835	208243883	(40712539)	+	(CGCTCCG)n	Simple_repeat	1	51	(0)	307821
35	2.8	0.0	0.0	chr1	208244300	208244336	(40712086)	+	(GCG)n	Simple_repeat	1	37	(0)	307822
12	14.0	7.3	2.3	chr1	208244413	208244453	(40711969)	+	(CCGCGG)n	Simple_repeat	1	44	(0)	307823
17	23.0	0.0	4.9	chr1	208244441	208244501	(40711921)	+	(CCGCCC)n	Simple_repeat	1	61	(0)	307824
18	26.0	2.2	5.4	chr1	208244454	208244502	(40711920)	+	(CCCG)n	Simple_repeat	2	93	(0)	307825
1991	16.1	4.7	0.8	chr1	209486000	209486350	(39470072)	+	MER47A	DNA/TcMar-Tigger	2	366	(0)	309722
1052	25.8	11.0	9.6	chr1	209486351	209486685	(39469737)	+	MER34A	LTR/ERV1	207	571	(0)	309721
353	25.0	2.8	1.9	chr1	209667101	209667206	(39289216)	C	MER5B	DNA/hAT-Charlie	(71)	107	1	310016
283	33.4	15.4	1.6	chr1	209667291	209667676	(39288746)	+	L2a	LINE/L2	2362	2810	(609)	310017
312	32.9	10.8	3.3	chr1	209667808	209668247	(39288175)	C	L2b	LINE/L2	(61)	3314	2841	310018
17	20.3	2.4	0.0	chr1	209675275	209675315	(39281107)	+	(TCC)n	Simple_repeat	1	42	(0)	310028
363	24.6	0.8	5.6	chr1	210292997	210293121	(38663301)	C	MIR3	SINE/MIR	(35)	173	55	310926
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
15	18.4	2.1	4.2	chr1	211259610	211259656	(37696766)	+	(CGGCAG)n	Simple_repeat	1	48	(0)	312390
14	4.8	0.0	4.2	chr1	211259634	211259657	(37696765)	+	(CGG)n	Simple_repeat	1	24	(0)	312391
14	29.9	1.4	2.9	chr1	211259878	211259946	(37696476)	+	(CCCCCCG)n	Simple_repeat	1	70	(0)	312392
19	0.0	6.7	0.0	chr1	211382660	211382689	(37573733)	+	(CCCCT)n	Simple_repeat	1	32	(0)	312613
19	22.4	4.8	0.0	chr1	211578138	211578199	(37378223)	+	(GGCCGT)n	Simple_repeat	1	65	(0)	312973
341	24.8	4.6	7.4	chr1	212468058	212468192	(36488230)	+	LTR33	LTR/ERVL	167	297	(218)	314564
187	26.7	7.1	18.0	chr1	212468330	212468457	(36487965)	+	MIR	SINE/MIR	14	126	(136)	314565
19	12.2	0.0	2.6	chr1	212468458	212468495	(36487927)	+	(TTCCC)n	Simple_repeat	1	38	(0)	314566
1620	10.6	6.2	5.1	chr1	212468500	212468772	(36487650)	C	AluSx	SINE/Alu	(36)	276	1	314567
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
14	17.1	2.4	2.4	chr1	212858391	212858431	(36097991)	+	G-rich	Low_complexity	1	42	(0)	315328
21	7.7	0.0	0.0	chr1	213987549	213987576	(34968846)	+	(A)n	Simple_repeat	1	28	(0)	317037
22	15.2	0.0	2.2	chr1	213987703	213987748	(34968674)	+	G-rich	Low_complexity	1	46	(0)	317038
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
16	21.7	0.0	0.0	chr1	214281540	214281571	(34674851)	+	G-rich	Low_complexity	1	32	(0)	317487
2577	24.4	3.4	7.5	chr1	214345101	214345816	(34610606)	C	MER21C	LTR/ERVL	(33)	905	213	317562
16	18.7	7.0	0.0	chr1	214551802	214551844	(34404578)	+	(GC)n	Simple_repeat	1	46	(0)	317877
18	17.9	2.3	0.0	chr1	214603356	214603399	(34353023)	+	(GGCGGCG)n	Simple_repeat	1	45	(0)	317968
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
406	26.4	2.3	0.0	chr1	216048972	216049096	(32907326)	C	MER103C	DNA/hAT-Charlie	(124)	173	46	319875
30	9.9	1.7	3.4	chr1	217135519	217135576	(31820846)	+	(GGC)n	Simple_repeat	1	59	(0)	321298
2340	11.9	3.0	0.6	chr1	219547946	219548300	(29408122)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	324763
184	31.0	11.0	5.8	chr1	219548569	219548705	(29407717)	C	OldhAT1	DNA/hAT-Ac	(1576)	1272	1128	324764
293	23.6	16.7	0.0	chr1	219660624	219660733	(29295689)	C	MIR3	SINE/MIR	(38)	170	39	324929
762	23.5	1.5	16.1	chr1	220113165	220113263	(28843159)	C	L1MC5	LINE/L1	(239)	9065	8973	325712
911	19.1	0.6	0.6	chr1	220113654	220113815	(28842607)	C	AluJr	SINE/Alu	(21)	291	130	325716
26	0.0	0.0	0.0	chr1	220527824	220527848	(28428574)	+	(ACAA)n	Simple_repeat	1	25	(0)	326368
15	14.4	0.0	0.0	chr1	220527854	220527877	(28428545)	+	(A)n	Simple_repeat	1	24	(0)	326369
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
15	23.4	2.8	5.4	chr1	220528499	220528570	(28427852)	+	(CCGCCTC)n	Simple_repeat	1	74	(0)	326372
13	18.4	0.0	0.0	chr1	220528630	220528660	(28427762)	+	(CTCCTC)n	Simple_repeat	1	31	(0)	326373
922	27.0	9.5	12.5	chr1	220684958	220685287	(28271135)	+	LTR67B	LTR/ERVL	4	315	(305)	326581
1829	16.6	2.6	8.9	chr1	220685288	220685411	(28271011)	+	MLT1B	LTR/ERVL-MaLR	1	110	(280)	326582
1663	12.9	7.6	1.5	chr1	220685412	220685682	(28270740)	+	AluJo	SINE/Alu	3	291	(21)	326583
13	21.5	4.0	1.9	chr1	220879536	220879585	(28076837)	+	(CCGGCTC)n	Simple_repeat	1	52	(0)	326859
422	21.6	16.9	0.0	chr1	222805817	222805964	(26150458)	C	LTR50	LTR/ERVL	(523)	272	95	329711
245	27.3	0.0	8.3	chr1	222806013	222806084	(26150338)	+	LTR88a	LTR/Gypsy?	3	68	(769)	329712
300	31.9	6.7	11.7	chr1	222806147	222806217	(26150205)	+	L2c	LINE/L2	2923	2996	(430)	329713
12	0.0	3.9	7.4	chr1	223364314	223364339	(25592083)	+	(GCG)n	Simple_repeat	1	27	(0)	330584
12	9.2	0.0	4.0	chr1	223726557	223726581	(25229841)	+	(CCCT)n	Simple_repeat	1	25	(0)	331118
189	30.5	11.9	2.8	chr1	223727021	223727165	(25229257)	+	MamTip2	DNA/hAT-Tip100	67	226	(79)	331119
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
329	24.4	4.0	0.8	chr1	224042898	224043017	(24913405)	+	MamRep1527	LTR	399	522	(447)	331665
345	26.5	3.9	0.0	chr1	224504028	224504125	(24452297)	+	MIRc	SINE/MIR	107	208	(60)	332679
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
1846	20.2	7.6	2.1	chr1	224655656	224656090	(24300332)	C	LOR1b	LTR/ERV1	(0)	461	1	332935
15	7.5	0.0	6.2	chr1	225427627	225427658	(23528764)	+	(GCCGC)n	Simple_repeat	1	32	(0)	333956
14	18.3	2.5	2.4	chr1	225427783	225427822	(23528600)	+	GA-rich	Low_complexity	1	41	(0)	333957
18	20.0	1.8	3.6	chr1	225428084	225428138	(23528284)	+	(CGCCT)n	Simple_repeat	1	56	(0)	333958
12	8.1	3.6	3.5	chr1	225652654	225652681	(23303741)	+	(CCCGC)n	Simple_repeat	1	29	(0)	334306
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
2618	7.2	10.5	1.2	chr1	225810575	225810980	(23145442)	C	LTR7	LTR/ERV1	(2)	448	1	334625
385	21.8	0.7	17.0	chr1	225811219	225811389	(23145033)	+	Arthur1A	DNA/hAT-Tip100	34	176	(1)	334626
17	12.7	0.0	0.0	chr1	225924502	225924527	(23031895)	+	(C)n	Simple_repeat	1	26	(0)	334819
2509	6.7	0.0	1.0	chr1	225975627	225975939	(22980483)	+	AluY	SINE/Alu	2	311	(0)	334938
12	23.0	6.9	1.6	chr1	226062414	226062471	(22893951)	+	G-rich	Low_complexity	1	62	(0)	335129
22	24.4	3.0	4.8	chr1	226062503	226062528	(22893894)	+	G-rich	Low_complexity	1	52	(51)	335129
17	25.9	3.9	0.0	chr1	226062529	226062579	(22893843)	+	(GC)n	Simple_repeat	1	53	(0)	335130
22	24.4	3.0	4.8	chr1	226062580	226062602	(22893820)	+	G-rich	Low_complexity	53	103	(0)	335129
18	10.2	6.8	2.1	chr1	226186453	226186496	(22769926)	+	(GCC)n	Simple_repeat	1	47	(0)	335385
462	29.3	7.6	3.1	chr1	226187088	226187249	(22769173)	C	MIRc	SINE/MIR	(11)	257	88	335386
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
2288	11.0	0.7	0.0	chr1	226410137	226410437	(22545985)	+	AluSx	SINE/Alu	2	304	(8)	335841
2486	19.0	10.3	18.9	chr1	226410438	226410785	(22545637)	+	LTR102_Mam	LTR/ERVL	609	851	(0)	335839
2209	14.8	13.2	3.8	chr1	226444921	226445439	(22510983)	C	LTR49	LTR/ERV1	(0)	622	1	335919
1833	12.6	1.9	0.7	chr1	226445633	226445935	(22510487)	+	MER49	LTR/ERV1	10	316	(607)	335920
1537	11.6	2.1	0.4	chr1	226445938	226446171	(22510251)	+	7SK	RNA	2	239	(92)	335921
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
14	17.5	0.0	0.0	chr1	226920681	226920712	(22035710)	+	(AGACCC)n	Simple_repeat	1	32	(0)	336703
227	23.6	7.7	0.0	chr1	226939238	226939309	(22017113)	C	Charlie18a	DNA/hAT-Charlie	(191)	151	74	336729
617	23.3	8.5	1.0	chr1	227084546	227084740	(21871682)	C	L1M7	LINE/L1	(5385)	833	623	336889
1534	18.1	15.0	6.0	chr1	227084768	227085250	(21871172)	+	MLT2B4	LTR/ERVL	20	561	(0)	336890
872	23.6	12.6	0.5	chr1	227275189	227275579	(21680843)	+	L1MEd	LINE/L1	2856	3300	(2846)	337205
9246	6.1	1.2	9.6	chr1	227275584	227277091	(21679331)	+	SVA_A	Retroposon/SVA	8	1387	(0)	337206
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
2430	6.1	0.3	0.7	chr1	227382961	227383254	(21573168)	C	AluY	SINE/Alu	(17)	294	2	337420
2718	25.6	11.7	6.1	chr1	227383255	227383268	(21573154)	+	L1MC1	LINE/L1	4586	4611	(1710)	337412
2422	6.6	0.7	1.3	chr1	227383269	227383569	(21572853)	C	AluY	SINE/Alu	(12)	299	1	337421
2224	18.6	3.2	2.1	chr1	227564047	227564512	(21391910)	C	MER57E3	LTR/ERV1	(16)	471	1	337651
7587	8.9	5.6	3.9	chr1	227679712	227681200	(21275222)	+	Harlequin-int	LTR/ERV1	1	1422	(5474)	337778
6421	7.8	2.1	2.7	chr1	227710002	227711833	(21244589)	C	SVA_D	Retroposon/SVA	(0)	1386	64	337808
2277	12.5	0.3	0.7	chr1	227713011	227713307	(21243115)	C	AluSz6	SINE/Alu	(16)	296	1	337812
14142	14.3	2.0	1.8	chr1	227713347	227716012	(21240410)	+	L1PA10	LINE/L1	189	2775	(3556)	337813
258	26.0	7.7	0.0	chr1	227762838	227762933	(21193489)	C	L1MD3	LINE/L1	(389)	7606	7503	337864
249	24.1	2.4	1.7	chr1	227909321	227909995	(21046427)	+	GA-rich	Low_complexity	1	691	(0)	338039
14	12.7	0.0	0.0	chr1	227947529	227947554	(21008868)	+	(ACG)n	Simple_repeat	1	26	(0)	338087
18	27.2	1.2	4.8	chr1	227947679	227947760	(21008662)	+	(GCCCC)n	Simple_repeat	1	83	(0)	338088
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1686	17.6	0.6	6.9	chr1	229228741	229229101	(19727321)	C	Tigger4b	DNA/TcMar-Tigger	(23)	338	1	339902
255	34.0	5.0	10.3	chr1	229229155	229229387	(19727035)	C	MamSINE1	SINE/tRNA-RTE	(69)	221	2	339903
41	24.7	5.6	3.4	chr1	229271387	229271584	(19684838)	+	(GGCGCGG)n	Simple_repeat	1	209	(0)	339986
15	10.8	3.3	0.0	chr1	229271623	229271652	(19684770)	+	(TTGCTC)n	Simple_repeat	1	31	(0)	339987
13	17.8	0.0	2.9	chr1	229342542	229342575	(19613847)	+	(CCGCC)n	Simple_repeat	1	34	(0)	340087
895	9.9	0.0	0.0	chr1	229419435	229419545	(19536877)	C	AluSx	SINE/Alu	(201)	111	1	340232
229	26.6	3.0	1.5	chr1	229419554	229419618	(19536804)	+	L2b	LINE/L2	3226	3291	(84)	340224
184	16.7	0.0	0.0	chr1	229419619	229419648	(19536774)	+	L2b	LINE/L2	3342	3371	(4)	340224
16	23.3	2.2	0.0	chr1	229626252	229626296	(19330126)	+	(GCC)n	Simple_repeat	1	46	(0)	340622
2111	16.3	5.9	0.0	chr1	230046988	230047385	(18909037)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	10	341345
16	20.3	0.0	2.4	chr1	230066975	230067016	(18889406)	+	(CCCCGC)n	Simple_repeat	1	42	(0)	341372
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
490	25.2	2.8	1.4	chr1	230832448	230832588	(18123834)	+	L2a	LINE/L2	3257	3399	(27)	342483
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
24	6.8	0.0	0.0	chr1	231626638	231626668	(17329754)	+	(GT)n	Simple_repeat	1	31	(0)	343832
15	0.0	0.0	0.0	chr1	231626668	231626684	(17329738)	+	(GC)n	Simple_repeat	1	17	(0)	343833
11334	8.7	1.1	0.0	chr1	231685767	231687234	(17269188)	C	THE1A-int	LTR/ERVL-MaLR	(96)	1484	1	343922
1764	19.3	7.3	0.5	chr1	231885877	231886245	(17070177)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	344201
22	7.9	2.3	4.4	chr1	232630076	232630119	(16326303)	+	(CTC)n	Simple_repeat	1	45	(0)	345178
17	9.3	2.8	2.7	chr1	232630156	232630191	(16326231)	+	(CCGC)n	Simple_repeat	1	37	(0)	345179
2319	7.0	0.7	2.3	chr1	232724946	232725247	(16231175)	+	AluY	SINE/Alu	1	297	(14)	345334
131	6.5	1.9	3.3	chr1	232725248	232725457	(16230965)	+	(GGGAG)n	Simple_repeat	1	214	(0)	345335
183	26.4	1.9	3.6	chr1	232725534	232725588	(16230834)	+	L2b	LINE/L2	3297	3350	(25)	345336
2263	9.1	0.4	0.0	chr1	233130506	233130781	(15825641)	C	AluY	SINE/Alu	(33)	278	2	345922
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
1603	19.3	3.5	0.7	chr1	233431582	233431891	(15524531)	C	AluJb	SINE/Alu	(0)	312	3	346382
4652	13.7	3.7	1.1	chr1	233431908	233433086	(15523336)	C	L1PB4	LINE/L1	(14)	6142	4935	346383
2537	14.8	2.6	0.0	chr1	233465859	233466312	(15490110)	+	LTR12E	LTR/ERV1	1	466	(856)	346446
1845	12.9	4.1	4.0	chr1	233466311	233466648	(15489774)	+	LTR12D	LTR/ERV1	828	1132	(122)	346447
43	12.9	1.2	2.4	chr1	233573124	233573205	(15383217)	+	(TCCCT)n	Simple_repeat	1	83	(0)	346603
1982	12.8	0.0	0.0	chr1	233573208	233573473	(15382949)	C	AluSz	SINE/Alu	(32)	280	15	346604
1533	26.0	7.4	3.2	chr1	233635662	233636668	(15319754)	C	L2a	LINE/L2	(0)	3426	2378	346694
59	3.5	0.0	0.0	chr1	233904440	233904498	(15051924)	+	(AG)n	Simple_repeat	1	59	(0)	347066
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
12	11.6	3.3	3.2	chr1	233904670	233904699	(15051723)	+	(CGACC)n	Simple_repeat	1	31	(0)	347068
10417	10.4	3.8	1.9	chr1	234188253	234190779	(14765643)	+	L1PB1	LINE/L1	829	3414	(3448)	347497
166	24.5	3.8	4.8	chr1	234397200	234397863	(14558559)	+	G-rich	Low_complexity	1	689	(0)	347808
30	19.7	3.3	3.2	chr1	234544489	234544580	(14411842)	+	G-rich	Low_complexity	1	95	(0)	348058
12	19.3	0.0	5.1	chr1	234600126	234600164	(14356258)	+	G-rich	Low_complexity	1	39	(0)	348157
37	15.3	0.0	1.4	chr1	234600189	234600258	(14356164)	+	(GCCCC)n	Simple_repeat	1	70	(0)	348158
21	23.3	0.0	0.0	chr1	234609909	234609953	(14346469)	+	G-rich	Low_complexity	1	45	(0)	348166
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
594	27.6	20.0	2.0	chr1	235411759	235412157	(13544265)	+	L2	LINE/L2	1723	2211	(1208)	349695
61	4.6	2.0	4.0	chr1	235412158	235412256	(13544166)	+	(TCCCC)n	Simple_repeat	1	101	(0)	349696
1729	17.5	0.4	0.0	chr1	235412264	235412526	(13543896)	C	AluSx1	SINE/Alu	(45)	267	4	349697
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
14	12.2	8.2	3.8	chr1	235588828	235588876	(13367546)	+	(CCACT)n	Simple_repeat	1	53	(0)	350049
15	4.8	0.0	0.0	chr1	236065014	236065035	(12891387)	+	(CAG)n	Simple_repeat	1	22	(0)	350913
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2686	7.0	0.0	1.1	chr1	236161556	236161914	(12794508)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	351120
608	17.0	0.0	4.5	chr1	236300979	236301049	(12655373)	+	U13_	snRNA	1	68	(40)	351342
5002	14.9	8.1	0.8	chr1	236301050	236301882	(12654540)	+	LTR1D1	LTR/ERV1	1	899	(0)	351343
8786	15.2	5.6	5.6	chr1	236377884	236378636	(12577786)	C	L1MCa	LINE/L1	(5683)	825	18	351488
13	21.9	2.3	2.2	chr1	236395330	236395373	(12561049)	+	(TCCCGGC)n	Simple_repeat	1	45	(0)	351538
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
15	23.2	1.3	7.8	chr1	236395861	236395936	(12560486)	+	(GCCCCT)n	Simple_repeat	1	77	(0)	351540
758	19.4	5.0	1.7	chr1	236516961	236517133	(12439289)	+	L1MC5	LINE/L1	9094	9272	(32)	351810
715	9.2	0.9	0.0	chr1	236517151	236517259	(12439163)	C	LTR9B	LTR/ERV1	(84)	560	451	351811
20	15.7	7.3	2.7	chr1	236686381	236686448	(12269974)	+	G-rich	Low_complexity	1	73	(0)	352104
27	0.0	3.5	0.0	chr1	236686568	236686596	(12269826)	+	(CCCGCCG)n	Simple_repeat	1	30	(0)	352105
14	27.7	1.6	3.1	chr1	237042597	237042660	(11913762)	+	G-rich	Low_complexity	1	65	(0)	352680
13	22.5	0.0	7.4	chr1	237042888	237042941	(11913481)	+	(GGCC)n	Simple_repeat	1	54	(0)	352681
7620	11.0	4.9	8.2	chr1	239254762	239256061	(9700361)	C	LTR12D	LTR/ERV1	(0)	1254	1	355830
408	29.9	7.4	6.8	chr1	239256062	239256106	(9700316)	C	L1MEd	LINE/L1	(5862)	1224	1179	355827
4154	12.1	1.7	1.1	chr1	240054214	240054842	(8901580)	+	MER41B	LTR/ERV1	2	634	(0)	357063
12287	7.5	0.9	0.7	chr1	240077495	240078968	(8877454)	+	THE1B-int	LTR/ERVL-MaLR	102	1580	(0)	357109
2198	12.5	7.2	1.8	chr1	240078971	240079312	(8877110)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	357111
1595	9.8	18.1	0.0	chr1	240595104	240595339	(8361083)	+	AluSc	SINE/Alu	1	288	(21)	357889
487	25.5	16.8	1.6	chr1	240595643	240595833	(8360589)	+	MIRb	SINE/MIR	5	230	(38)	357890
347	30.9	13.9	0.9	chr1	241150553	241150650	(7805772)	+	LTR78	LTR/ERV1	241	360	(944)	358833
2990	19.1	1.3	5.9	chr1	241150651	241151230	(7805192)	C	MLT2B3	LTR/ERVL	(0)	554	2	358834
32	23.7	2.2	1.1	chr1	241357511	241357599	(7598823)	+	(GATG)n	Simple_repeat	1	91	(0)	359176
636	25.6	8.3	4.1	chr1	241372247	241372466	(7583956)	+	MIRb	SINE/MIR	6	235	(33)	359202
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
1055	18.3	2.6	3.8	chr1	241424635	241424984	(7531438)	+	MER52D	LTR/ERV1	470	884	(1239)	359283
30	24.1	0.9	4.7	chr1	241639705	241639834	(7316588)	+	(GGCGG)n	Simple_repeat	1	125	(0)	359585
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
16	15.1	2.6	2.5	chr1	243849367	243849405	(5107017)	+	(ACCC)n	Simple_repeat	1	40	(0)	363166
22	22.9	4.1	1.3	chr1	243850046	243850118	(5106304)	+	(CGG)n	Simple_repeat	1	76	(0)	363167
13	32.1	0.0	0.0	chr1	243850081	243850130	(5106292)	+	G-rich	Low_complexity	1	50	(0)	363168
15	15.0	2.6	2.5	chr1	243850144	243850183	(5106239)	+	(CCCCT)n	Simple_repeat	1	40	(0)	363169
19	17.2	3.1	4.5	chr1	243850281	243850295	(5106127)	+	GA-rich	Low_complexity	1	15	(0)	363170
28	0.0	0.0	0.0	chr1	243850296	243850321	(5106101)	+	(GGC)n	Simple_repeat	1	26	(0)	363171
19	17.2	3.1	4.5	chr1	243850322	243850370	(5106052)	+	GA-rich	Low_complexity	16	63	(0)	363172
14	24.6	1.4	6.9	chr1	243850536	243850606	(5105816)	+	(CCG)n	Simple_repeat	1	72	(0)	363173
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
439	23.3	2.8	13.4	chr1	243933646	243933786	(5022636)	+	Charlie1a	DNA/hAT-Charlie	1	128	(395)	363333
251	17.1	1.2	1.4	chr1	243933792	243934286	(5022136)	+	(TCCCC)n	Simple_repeat	1	494	(0)	363334
1962	16.4	0.0	1.3	chr1	243934287	243934590	(5021832)	C	AluJr	SINE/Alu	(12)	300	1	363335
15	23.9	4.1	0.0	chr1	244048208	244048256	(4908166)	+	(CGC)n	Simple_repeat	1	51	(0)	363518
15	13.1	2.0	8.0	chr1	244048243	244048291	(4908131)	+	(CCGCC)n	Simple_repeat	1	50	(0)	363519
16	15.3	2.0	6.0	chr1	244048506	244048554	(4907868)	+	GA-rich	Low_complexity	1	50	(0)	363520
34	19.5	0.0	0.0	chr1	244048593	244048664	(4907758)	+	(C)n	Simple_repeat	1	72	(0)	363521
26	27.2	3.7	1.8	chr1	244048665	244048698	(4907724)	+	(CGCC)n	Simple_repeat	4	113	(0)	363522
22	25.3	1.2	3.7	chr1	244048798	244048877	(4907545)	+	G-rich	Low_complexity	1	81	(0)	363523
20	14.9	1.4	9.6	chr1	244049055	244049126	(4907296)	+	(GGCG)n	Simple_repeat	1	73	(0)	363524
15	3.6	6.5	3.0	chr1	244835195	244835233	(4121189)	+	(GGGCTG)n	Simple_repeat	1	40	(0)	364892
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
201	33.0	12.9	0.9	chr1	245018780	245018895	(3937527)	C	MIRb	SINE/MIR	(47)	221	90	365302
454	26.7	0.6	4.8	chr1	245090431	245090599	(3865823)	C	MIR	SINE/MIR	(0)	262	105	365455
702	20.2	1.2	2.4	chr1	245269057	245269223	(3687199)	C	L1MB1	LINE/L1	(23)	6145	5981	365776
13	21.2	2.1	4.2	chr1	245269224	245269270	(3687152)	+	(CTC)n	Simple_repeat	1	48	(0)	365777
2881	17.0	1.5	2.4	chr1	245269275	245269455	(3686967)	C	L1MB1	LINE/L1	(156)	6012	5828	365776
1480	17.3	8.4	1.1	chr1	245329813	245330089	(3626333)	C	AluJo	SINE/Alu	(13)	299	1	365876
13	18.2	2.6	2.5	chr1	245680163	245680201	(3276221)	+	(CCTTC)n	Simple_repeat	1	40	(0)	366401
1187	28.1	6.3	3.3	chr10	743618	744074	(133053348)	+	L1MA7	LINE/L1	55	526	(6021)	371804
593	26.7	2.6	20.6	chr10	744516	744850	(133052572)	+	L1MA7	LINE/L1	535	807	(5740)	371804
16	17.6	6.6	3.1	chr10	3067478	3067538	(130729884)	+	(GGCGCG)n	Simple_repeat	1	65	(0)	374579
1836	19.9	4.7	2.2	chr10	3322443	3322858	(130474564)	+	MSTC	LTR/ERVL-MaLR	2	428	(0)	374930
385	31.1	2.6	0.0	chr10	3322908	3323055	(130474367)	C	MER63A	DNA/hAT-Blackjack	(50)	160	9	374931
2448	6.8	0.7	0.7	chr10	3323205	3323512	(130473910)	+	AluSx	SINE/Alu	1	308	(4)	374932
59	15.5	1.8	7.2	chr10	3356339	3356502	(130440920)	+	(CTCC)n	Simple_repeat	1	167	(0)	374983
2294	12.0	1.4	0.6	chr10	3517630	3517981	(130279441)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	375203
17	25.1	6.7	0.0	chr10	3785252	3785326	(130012096)	+	(CCCGCC)n	Simple_repeat	1	80	(0)	375557
5516	10.1	10.0	3.3	chr10	5137669	5138756	(128658666)	C	MER11A	LTR/ERVK	(0)	1266	1	377352
748	12.8	0.0	3.3	chr10	5335592	5335712	(128461710)	+	L1PA8	LINE/L1	6056	6172	(0)	377600
29	4.4	4.2	0.0	chr10	5335715	5335755	(128461667)	+	(AAAGG)n	Simple_repeat	1	43	(0)	377601
46	2.2	0.0	0.0	chr10	5335756	5335802	(128461620)	+	(GGGAG)n	Simple_repeat	1	47	(0)	377602
19	12.0	0.0	2.6	chr10	5813435	5813472	(127983950)	+	(GGGAG)n	Simple_repeat	1	38	(0)	378339
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
11	19.6	10.0	1.5	chr10	5977342	5977401	(127820021)	+	(CCAGCTC)n	Simple_repeat	1	66	(0)	378667
15	15.3	0.0	0.0	chr10	5977417	5977445	(127819977)	+	(GCA)n	Simple_repeat	1	29	(0)	378668
2663	18.9	6.6	0.4	chr10	6618237	6618751	(127178671)	+	MER21A	LTR/ERVL	383	931	(0)	379787
17	0.0	0.0	0.0	chr10	8151907	8151925	(125645497)	+	(CA)n	Simple_repeat	1	19	(0)	382228
22	9.2	0.0	0.0	chr10	8151925	8151959	(125645463)	+	(CTCT)n	Simple_repeat	1	35	(0)	382229
15	15.7	2.1	6.1	chr10	8152103	8152150	(125645272)	+	A-rich	Low_complexity	1	49	(0)	382230
18	3.8	0.0	3.5	chr10	8152235	8152263	(125645159)	+	(AATG)n	Simple_repeat	1	29	(0)	382231
15	20.9	0.0	7.0	chr10	11611162	11611218	(122186204)	+	(CCGCCCC)n	Simple_repeat	1	57	(0)	387152
19	0.0	9.7	0.0	chr10	11611514	11611544	(122185878)	+	(CGG)n	Simple_repeat	1	34	(0)	387153
477	25.8	5.6	6.5	chr10	11612005	11612203	(122185219)	+	MIR	SINE/MIR	12	208	(54)	387154
24	17.7	1.2	8.3	chr10	12349458	12349540	(121447882)	+	GA-rich	Low_complexity	1	84	(0)	388745
14	4.9	0.0	0.0	chr10	12349652	12349672	(121447750)	+	(GCG)n	Simple_repeat	1	21	(0)	388746
14	14.4	5.0	2.4	chr10	13299914	13299953	(120497469)	+	(GGCGCC)n	Simple_repeat	1	42	(0)	390494
1095	10.7	26.7	2.2	chr10	13300261	13300485	(120496937)	C	AluJr	SINE/Alu	(12)	300	1	390495
19	13.7	0.0	4.5	chr10	13347728	13347771	(120449651)	+	(CCTC)n	Simple_repeat	1	44	(0)	390594
17	12.9	0.0	2.8	chr10	13347772	13347807	(120449615)	+	(CGGCGG)n	Simple_repeat	1	36	(0)	390595
2376	8.3	1.4	0.0	chr10	13568405	13568693	(120228729)	C	AluSx	SINE/Alu	(19)	293	1	391012
1197	21.3	2.7	4.1	chr10	13568861	13569203	(120228219)	C	L1ME1	LINE/L1	(109)	6070	5733	391013
34	16.7	6.0	1.1	chr10	14174239	14174321	(119623101)	+	(CT)n	Simple_repeat	1	88	(0)	392027
24	22.5	3.7	2.4	chr10	14604285	14604365	(119193057)	+	(CGG)n	Simple_repeat	1	84	(0)	392730
83	28.9	1.2	0.8	chr10	14604707	14604958	(119192464)	+	(CT)n	Simple_repeat	1	255	(0)	392731
599	24.0	7.5	1.2	chr10	14654094	14654271	(119143151)	C	Charlie8	DNA/hAT-Charlie	(124)	217	28	392815
711	9.9	0.0	2.2	chr10	14878087	14878177	(118919245)	+	AluJb	SINE/Alu	200	288	(24)	393216
77	25.2	3.3	6.1	chr10	15168719	15169113	(118628309)	+	(CGCCC)n	Simple_repeat	1	408	(0)	393755
2575	12.6	2.9	0.0	chr10	16222161	16222565	(117574857)	C	L1PA10	LINE/L1	(18)	6150	5734	395412
4511	10.0	2.7	2.3	chr10	16222566	16223580	(117573842)	C	MER11A	LTR/ERVK	(1)	1265	1	395413
399	29.1	16.7	4.0	chr10	16278020	16278316	(117519106)	+	LTR81	LTR/Gypsy	846	1187	(2)	395495
1862	6.2	17.8	0.0	chr10	16974430	16974670	(116822752)	C	AluY	SINE/Alu	(18)	293	1	396655
2808	13.5	1.1	4.9	chr10	16974673	16975123	(116822299)	+	Tigger2a	DNA/TcMar-Tigger	1	434	(0)	396656
12	22.1	0.0	0.0	chr10	17229093	17229124	(116568298)	+	(GGCCCA)n	Simple_repeat	1	32	(0)	397005
4855	10.6	2.5	1.5	chr10	17263289	17264303	(116533119)	C	MER11A	LTR/ERVK	(0)	1266	1	397063
19994	9.8	1.9	0.7	chr10	17970718	17971258	(115826164)	C	L1MA2	LINE/L1	(1903)	5662	5114	398337
43	0.0	0.0	0.0	chr10	17971259	17971298	(115826124)	+	(CCCCT)n	Simple_repeat	1	40	(0)	398339
19994	13.4	4.8	2.0	chr10	17971299	17976256	(115821166)	C	L1MA2	LINE/L1	(2452)	5113	16	398337
990	23.5	13.1	2.9	chr10	21381338	21381617	(112415805)	C	Kanga1	DNA/TcMar-Tc2	(1432)	313	1	403564
1863	12.3	2.9	1.1	chr10	21381690	21381826	(112415596)	C	AluSx4	SINE/Alu	(27)	283	146	403565
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
13	14.1	0.0	5.7	chr10	21526051	21526085	(112271337)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	403870
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
18	13.2	0.0	0.0	chr10	21526217	21526249	(112271173)	+	(GGGAG)n	Simple_repeat	1	33	(0)	403872
12	36.1	0.0	2.6	chr10	21534011	21534087	(112263335)	+	(CCCGCG)n	Simple_repeat	1	77	(0)	403878
29	18.2	2.9	1.4	chr10	21534386	21534455	(112262967)	+	GA-rich	Low_complexity	1	72	(0)	403879
20	26.9	3.2	3.1	chr10	21534817	21534910	(112262512)	+	(CCGCCG)n	Simple_repeat	1	97	(0)	403880
925	18.2	0.7	0.0	chr10	22032946	22033093	(111764329)	+	AluJo	SINE/Alu	3	151	(161)	404715
245	25.4	0.0	2.9	chr10	22033094	22033162	(111764260)	C	MLT1J	LTR/ERVL-MaLR	(403)	109	43	404714
13	8.4	13.2	0.0	chr10	22251938	22251977	(111545445)	+	A-rich	Low_complexity	1	45	(0)	404995
14	24.9	3.9	0.0	chr10	22320919	22320970	(111476452)	+	G-rich	Low_complexity	1	54	(0)	405115
16	18.9	0.0	0.0	chr10	22321042	22321071	(111476351)	+	G-rich	Low_complexity	1	30	(0)	405116
18	6.3	6.1	0.0	chr10	22321136	22321168	(111476254)	+	(CCCTC)n	Simple_repeat	1	35	(0)	405117
17	25.6	4.2	1.4	chr10	22321169	22321203	(111476219)	+	(CCGC)n	Simple_repeat	4	74	(0)	405118
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
14	11.7	2.3	6.8	chr10	22340648	22340690	(111456732)	+	G-rich	Low_complexity	1	44	(0)	405128
5662	21.8	7.2	2.3	chr10	23094127	23095206	(110702216)	+	L1ME1	LINE/L1	4909	6028	(151)	406260
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
350	8.6	1.8	8.7	chr10	23330962	23331762	(110465660)	+	G-rich	Low_complexity	1	815	(0)	406629
48	23.9	4.2	4.7	chr10	23344117	23344368	(110453054)	+	G-rich	Low_complexity	1	250	(0)	406652
13	14.0	4.7	4.4	chr10	24724937	24724979	(109072443)	+	(TCACCC)n	Simple_repeat	1	45	(0)	408957
45	2.3	0.0	0.0	chr10	24952656	24952700	(108844722)	+	(GGGGAC)n	Simple_repeat	1	45	(0)	409451
16	24.9	0.0	6.2	chr10	24952859	24952922	(108844500)	+	(GCC)n	Simple_repeat	1	64	(0)	409452
15	22.0	0.0	5.7	chr10	25934809	25934861	(107862561)	+	G-rich	Low_complexity	1	53	(0)	410940
3374	11.4	9.6	2.8	chr10	26366594	26367639	(107429783)	+	MER11A	LTR/ERVK	1	1232	(4)	411516
1097	28.6	1.1	0.1	chr10	26831906	26832248	(106965174)	C	Kanga1a	DNA/TcMar-Tc2	(403)	351	1	412379
21	15.9	0.0	0.0	chr10	26860600	26860641	(106936781)	+	(GGTTGG)n	Simple_repeat	1	42	(0)	412438
15	18.9	2.2	4.3	chr10	26860996	26861041	(106936381)	+	(CCT)n	Simple_repeat	1	47	(0)	412439
13	23.3	3.0	5.8	chr10	27155282	27155348	(106642074)	+	G-rich	Low_complexity	1	69	(0)	412953
775	18.1	0.8	0.0	chr10	28270406	28270532	(105526890)	+	FLAM_A	SINE/Alu	1	128	(14)	414743
16	21.3	0.0	0.0	chr10	28270533	28270565	(105526857)	+	G-rich	Low_complexity	1	33	(0)	414744
1103	14.1	11.6	0.5	chr10	28691344	28691542	(105105880)	+	MSTA	LTR/ERVL-MaLR	1	224	(204)	415567
76	18.1	6.0	1.8	chr10	28691544	28691759	(105105663)	+	(CCTC)n	Simple_repeat	1	225	(0)	415568
2554	6.2	0.3	0.3	chr10	29589887	29590195	(104207227)	+	AluSg7	SINE/Alu	1	309	(0)	417103
36	0.0	0.0	0.0	chr10	30432979	30433009	(103364413)	+	(GA)n	Simple_repeat	1	31	(0)	418705
1254	20.4	6.1	2.2	chr10	31595069	31595337	(102202085)	+	AluJr4	SINE/Alu	2	281	(31)	420474
38	17.1	9.9	3.0	chr10	31595338	31595489	(102201933)	+	GA-rich	Low_complexity	1	167	(0)	420475
71	16.6	6.9	0.0	chr10	31854986	31855158	(101942264)	+	GA-rich	Low_complexity	1	185	(0)	420863
11505	10.2	0.9	0.5	chr10	31954318	31955889	(101841533)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(51)	421044
5692	7.1	2.6	5.5	chr10	31969059	31970051	(101827371)	+	SVA_E	Retroposon/SVA	1	862	(520)	421074
32	0.0	0.0	0.0	chr10	31970052	31970081	(101827341)	+	(G)n	Simple_repeat	1	30	(0)	421075
6496	8.0	2.8	6.2	chr10	31970082	31971613	(101825809)	+	SVA_E	Retroposon/SVA	422	1364	(18)	421074
23	9.7	0.0	0.0	chr10	32055519	32055551	(101741871)	+	(CA)n	Simple_repeat	1	33	(0)	421234
4155	12.7	5.6	2.6	chr10	32218893	32219865	(101577557)	+	MER11A	LTR/ERVK	1	1263	(3)	421577
3211	10.3	0.2	4.8	chr10	32219866	32220364	(101577058)	+	L1PA15	LINE/L1	5685	6160	(5)	421578
29	3.2	0.0	0.0	chr10	32957999	32958030	(100839392)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	422529
13	12.7	2.6	5.1	chr10	32958103	32958140	(100839282)	+	(CCGCGGC)n	Simple_repeat	1	39	(0)	422530
69	0.0	0.0	0.0	chr10	33127872	33127933	(100669489)	+	(TTCCC)n	Simple_repeat	1	62	(0)	422816
99	18.4	3.5	3.0	chr10	33127941	33128197	(100669225)	+	(CTCCC)n	Simple_repeat	1	266	(0)	422817
1037	15.5	0.7	0.0	chr10	33128199	33128353	(100669069)	C	AluSz6	SINE/Alu	(32)	280	125	422818
22	0.0	0.0	0.0	chr10	33334669	33334692	(100462730)	+	(A)n	Simple_repeat	1	24	(0)	423102
12	12.5	0.0	3.6	chr10	33334710	33334737	(100462685)	+	G-rich	Low_complexity	1	28	(0)	423103
24	15.5	2.0	0.0	chr10	34814822	34814871	(98982551)	+	(CCCGCC)n	Simple_repeat	1	51	(0)	425323
16	27.3	1.6	3.2	chr10	34814996	34815057	(98982365)	+	(GCC)n	Simple_repeat	1	63	(0)	425324
24	23.8	3.5	2.2	chr10	34815156	34815242	(98982180)	+	(CTCGC)n	Simple_repeat	1	90	(0)	425325
30	5.7	0.0	0.0	chr10	34815493	34815529	(98981893)	+	(CCTC)n	Simple_repeat	1	37	(0)	425326
18	20.2	3.9	0.0	chr10	35639296	35639346	(98158076)	+	(CTCCC)n	Simple_repeat	1	53	(0)	426867
2384	11.3	0.0	0.3	chr10	35932129	35932430	(97864992)	C	AluSq	SINE/Alu	(12)	301	1	427322
250	32.9	10.1	0.0	chr10	36192329	36192471	(97604951)	+	L2	LINE/L2	2648	2806	(613)	427652
5620	15.6	2.5	0.4	chr10	36192474	36193448	(97603974)	C	L1MC1	LINE/L1	(0)	6333	5338	427653
2110	11.3	3.0	0.0	chr10	37471695	37471985	(96325437)	+	AluSx1	SINE/Alu	1	300	(12)	429595
66	1.6	0.0	0.0	chr10	37472007	37472070	(96325352)	+	(GGGAGGGGAA)n	Simple_repeat	1	64	(0)	429596
13	13.2	0.0	0.0	chr10	37472214	37472238	(96325184)	+	(ATTC)n	Simple_repeat	1	25	(0)	429597
1039	10.5	0.0	0.0	chr10	37982353	37982485	(95814937)	+	AluSz	SINE/Alu	1	133	(179)	430363
6531	9.3	12.4	8.9	chr10	37982497	37983713	(95813709)	C	MER11A	LTR/ERVK	(0)	1266	1	430364
2299	8.1	3.3	0.0	chr10	38011303	38011597	(95785825)	+	AluSq2	SINE/Alu	1	305	(8)	430418
765	22.7	3.3	2.2	chr10	42474977	42475156	(91322266)	C	Tigger2	DNA/TcMar-Tigger	(4)	2714	2533	432131
270	28.6	3.9	1.0	chr10	42475384	42475482	(91321940)	C	REP522	Satellite/telo	(862)	955	854	432132
1351	14.9	3.1	0.9	chr10	43336365	43336585	(90460837)	+	AluJr	SINE/Alu	86	311	(1)	433277
31	0.0	0.0	2.9	chr10	43396888	43396921	(90400501)	+	(GGGAG)n	Simple_repeat	1	34	(0)	433409
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
28	11.6	4.6	3.7	chr10	43409350	43409420	(90388002)	+	G-rich	Low_complexity	1	71	(0)	433437
1108	14.0	0.6	0.0	chr10	43409548	43409711	(90387711)	+	AluJb	SINE/Alu	137	301	(11)	433438
4937	9.4	1.5	2.0	chr10	43537833	43538951	(90258471)	+	MER11A	LTR/ERVK	1	1266	(0)	433740
78	19.2	2.1	2.6	chr10	43538954	43539037	(90258385)	+	(TTTC)n	Simple_repeat	1	85	(0)	433741
19	15.9	2.4	0.0	chr10	43648829	43648870	(90148552)	+	(GCCGGC)n	Simple_repeat	1	43	(0)	433924
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
24	20.4	3.5	4.5	chr10	45001106	45001191	(88796231)	+	G-rich	Low_complexity	1	89	(0)	435515
42	0.0	0.0	0.0	chr10	45374100	45374137	(88423285)	+	(GCGGGG)n	Simple_repeat	1	38	(0)	435978
19	4.2	13.7	1.7	chr10	45374138	45374188	(88423234)	+	G-rich	Low_complexity	1	58	(0)	435979
12	20.1	2.3	4.4	chr10	45374418	45374461	(88422961)	+	G-rich	Low_complexity	1	45	(0)	435980
319	28.6	0.0	3.2	chr10	45495465	45495558	(88301864)	+	MER34A	LTR/ERV1	40	130	(441)	436125
37	9.8	0.0	5.5	chr10	45495742	45495814	(88301608)	+	GA-rich	Low_complexity	1	73	(0)	436126
25	25.8	1.3	2.5	chr10	45495814	45495891	(88301531)	+	A-rich	Low_complexity	1	79	(0)	436127
24	27.6	5.6	1.8	chr10	46106989	46107149	(87690273)	+	(TC)n	Simple_repeat	1	167	(0)	437211
11	24.3	4.0	1.9	chr10	46556353	46556402	(87241020)	+	G-rich	Low_complexity	1	52	(0)	437855
181	28.8	6.7	8.3	chr10	47617239	47617359	(86180063)	+	L3	LINE/CR1	3458	3576	(523)	439440
11	18.4	6.7	2.1	chr10	48306614	48306658	(85490764)	+	(GCGCGT)n	Simple_repeat	1	48	(0)	440378
15	20.1	0.0	0.0	chr10	48306885	48306918	(85490504)	+	(GCC)n	Simple_repeat	1	34	(0)	440379
1924	13.1	0.0	7.4	chr10	50475973	50476284	(83321138)	+	AluSx	SINE/Alu	5	293	(19)	443414
34	17.6	0.0	2.6	chr10	50476285	50476348	(83321074)	+	GA-rich	Low_complexity	13	75	(0)	443415
774	15.1	0.0	0.8	chr10	50476349	50476475	(83320947)	+	MSTA-int	LTR/ERVL-MaLR	4	129	(1502)	443416
27	0.0	0.0	0.0	chr10	52072159	52072184	(81725238)	+	(T)n	Simple_repeat	1	26	(0)	445788
3269	13.9	0.2	0.0	chr10	52511804	52512299	(81285123)	C	LOR1a	LTR/ERV1	(0)	497	1	446389
2493	13.2	0.0	0.3	chr10	52580565	52580929	(81216493)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	446488
11414	10.3	0.7	0.2	chr10	52580930	52582501	(81214921)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	446488
2516	8.1	0.0	0.0	chr10	55263724	55264033	(78533389)	C	AluYm1	SINE/Alu	(1)	310	1	449934
11561	20.8	5.2	5.7	chr10	55264034	55266424	(78530998)	+	HUERS-P2-int	LTR/ERV1	751	3085	(3)	449933
31	32.5	0.0	4.1	chr10	55626942	55627087	(78170335)	+	A-rich	Low_complexity	1	146	(0)	450423
4742	9.0	2.3	1.8	chr10	56822702	56823715	(76973707)	+	MER11A	LTR/ERVK	1	1266	(0)	451931
7698	6.3	0.1	19.9	chr10	58243370	58245058	(75552364)	+	SVA_A	Retroposon/SVA	34	1387	(0)	453852
16	22.3	2.6	0.0	chr10	58512701	58512738	(75284684)	+	(GT)n	Simple_repeat	1	39	(0)	454284
15	30.4	0.0	0.0	chr10	59176503	59176546	(74620876)	+	(CG)n	Simple_repeat	1	44	(0)	455189
16	16.7	2.4	2.3	chr10	59176743	59176784	(74620638)	+	(CCTCTC)n	Simple_repeat	1	43	(0)	455190
19	12.8	0.0	0.0	chr10	59709884	59709917	(74087505)	+	(AGG)n	Simple_repeat	1	34	(0)	455972
13	27.4	0.0	6.2	chr10	59709957	59710020	(74087402)	+	(CCCGG)n	Simple_repeat	1	64	(0)	455973
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
5337	9.3	3.5	0.9	chr10	61039154	61039913	(72757509)	C	LTR17	LTR/ERV1	(0)	780	1	457987
310	25.0	2.0	2.0	chr10	61181661	61181762	(72615660)	C	Eulor11	DNA	(182)	371	270	458209
397	27.8	13.9	4.3	chr10	61454761	61454993	(72342429)	+	MIR	SINE/MIR	4	262	(6)	458592
1058	18.6	3.7	8.2	chr10	61455082	61455362	(72342060)	C	MER90a	LTR/ERV1	(11)	603	336	458593
767	18.8	12.7	2.1	chr10	61455365	61455536	(72341886)	C	MER90a	LTR/ERV1	(362)	213	16	458593
12	16.4	2.8	2.7	chr10	63630510	63630545	(70166877)	+	(CGCCCC)n	Simple_repeat	1	37	(0)	462128
12	31.5	1.8	0.0	chr10	63630576	63630630	(70166792)	+	G-rich	Low_complexity	1	56	(0)	462129
6281	10.2	17.3	0.7	chr10	64359777	64360830	(69436592)	+	MER11A	LTR/ERVK	1	1266	(0)	463264
1818	29.2	11.1	2.6	chr10	64360831	64360930	(69436492)	+	L1M7	LINE/L1	1326	1420	(4891)	463263
442	24.6	5.0	4.5	chr10	64360922	64361100	(69436322)	+	L1M7	LINE/L1	1561	1740	(4571)	463263
1999	14.1	0.9	1.8	chr10	65570387	65570726	(68226696)	+	MER61A	LTR/ERV1	1	337	(4)	464914
1677	23.0	4.2	7.1	chr10	65570727	65571292	(68226130)	+	MER61-int	LTR/ERV1	1	549	(4668)	464914
902	35.0	11.7	2.7	chr10	67651259	67651952	(66145470)	C	L3	LINE/CR1	(652)	3447	2684	467706
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
18	4.7	0.0	0.0	chr10	68075419	68075440	(65721982)	+	(G)n	Simple_repeat	1	22	(0)	468461
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
11	31.8	1.7	1.6	chr10	68560750	68560809	(65236613)	+	G-rich	Low_complexity	1	61	(0)	469547
2719	20.7	4.7	3.8	chr10	68867277	68868120	(64929302)	C	HERVK9-int	LTR/ERVK	(5237)	859	7	470317
4207	8.3	5.5	4.8	chr10	69488510	69489582	(64307840)	C	MER11A	LTR/ERVK	(0)	1266	1	471712
217	27.1	1.7	1.7	chr10	69629827	69629886	(64167536)	+	L2c	LINE/L2	3264	3323	(64)	471960
17	21.3	4.0	6.3	chr10	69630003	69630078	(64167344)	+	(CTT)n	Simple_repeat	1	79	(0)	471961
14	18.5	2.7	9.2	chr10	69630061	69630134	(64167288)	+	(CCTCCCA)n	Simple_repeat	1	76	(0)	471962
12	24.6	0.0	2.5	chr10	69630455	69630494	(64166928)	+	(GCGG)n	Simple_repeat	1	40	(0)	471963
305	35.3	6.5	1.5	chr10	69631124	69631327	(64166095)	+	MIR	SINE/MIR	28	242	(20)	471964
3493	10.1	1.6	5.2	chr10	70195047	70195180	(63602242)	C	L1PA14	LINE/L1	(4710)	1979	1851	472946
1853	9.1	0.0	0.8	chr10	70195189	70195443	(63601979)	C	L1PB1	LINE/L1	(2)	6149	5897	472948
372	9.1	0.0	1.8	chr10	70195546	70195601	(63601821)	+	MLT1B	LTR/ERVL-MaLR	64	118	(349)	472944
2172	10.7	0.0	0.0	chr10	70195602	70195892	(63601530)	+	AluSx1	SINE/Alu	15	305	(7)	472949
49	6.8	2.4	2.4	chr10	70554901	70554982	(63242440)	+	(CCTCC)n	Simple_repeat	1	84	(0)	473703
2002	13.1	0.0	1.0	chr10	70554983	70555272	(63242150)	C	AluSz6	SINE/Alu	(23)	289	3	473704
5352	13.8	19.6	1.4	chr10	70622502	70623541	(63173881)	+	MER52C	LTR/ERV1	1	1276	(2)	473835
29	25.4	5.1	2.8	chr10	70816132	70816268	(62981154)	+	G-rich	Low_complexity	1	144	(0)	474159
18	7.7	0.0	0.0	chr10	71964327	71964354	(61833068)	+	(GAG)n	Simple_repeat	1	28	(0)	476261
15	16.1	3.5	0.0	chr10	72260769	72260804	(61536618)	+	(CT)n	Simple_repeat	1	37	(0)	476890
17	10.7	4.5	4.3	chr10	72260962	72261005	(61536417)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	476891
223	31.1	0.0	1.3	chr10	72355122	72355196	(61442226)	C	MIR3	SINE/MIR	(33)	175	102	477094
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
35	0.0	0.0	0.0	chr10	73168309	73168340	(60629082)	+	(GAG)n	Simple_repeat	1	32	(0)	478774
40	34.3	2.2	2.2	chr10	73270418	73270461	(60526961)	+	(CTCTT)n	Simple_repeat	1	114	(71)	478961
17	6.2	5.6	2.6	chr10	73270462	73270497	(60526925)	+	(TTTTCT)n	Simple_repeat	1	38	(0)	478962
40	34.3	2.2	2.2	chr10	73270498	73270507	(60526915)	+	(CTCTT)n	Simple_repeat	115	138	(47)	478961
18	21.0	0.0	0.0	chr10	73270508	73270542	(60526880)	+	(C)n	Simple_repeat	1	35	(0)	478963
40	34.3	2.2	2.2	chr10	73270543	73270555	(60526867)	+	(CTCTT)n	Simple_repeat	139	185	(0)	478961
2232	12.8	0.0	0.4	chr10	73270556	73270836	(60526586)	C	AluSx1	SINE/Alu	(32)	280	1	478964
583	28.6	7.2	3.1	chr10	73997114	73997541	(59799881)	+	L1ME3G	LINE/L1	316	805	(119)	480355
15	17.6	0.0	4.8	chr10	73997951	73997992	(59799430)	+	G-rich	Low_complexity	1	42	(0)	480356
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
24	31.9	1.0	1.9	chr10	74826673	74826776	(58970646)	+	(GGC)n	Simple_repeat	1	105	(0)	481944
331	18.1	7.7	0.0	chr10	75269596	75269667	(58527755)	+	MER3	DNA/hAT-Charlie	132	209	(0)	482794
565	23.2	1.2	6.2	chr10	75269767	75269945	(58527477)	C	MLT1J	LTR/ERVL-MaLR	(328)	184	15	482792
14	25.9	3.0	4.3	chr10	75284126	75284192	(58513230)	+	GA-rich	Low_complexity	1	69	(0)	482824
434	28.3	3.5	2.4	chr10	75294468	75294637	(58502785)	C	MamRep4096	DNA/hAT-Tip100	(254)	172	1	482840
17	23.4	3.9	6.6	chr10	75294650	75294751	(58502671)	+	G-rich	Low_complexity	1	106	(0)	482841
13	13.2	0.0	0.0	chr10	75403419	75403443	(58393979)	+	(GAGG)n	Simple_repeat	1	25	(0)	483057
15	7.0	6.7	0.0	chr10	75632753	75632782	(58164640)	+	(AGTTT)n	Simple_repeat	1	32	(0)	483382
28	0.0	0.0	0.0	chr10	75632783	75632809	(58164613)	+	(T)n	Simple_repeat	1	27	(0)	483383
29	12.3	1.9	0.0	chr10	77926755	77926807	(55870615)	+	(GGAGGA)n	Simple_repeat	1	54	(0)	486826
13	11.1	9.8	2.2	chr10	77927144	77927184	(55870238)	+	GA-rich	Low_complexity	1	45	(0)	486827
250	32.0	0.0	1.3	chr10	77967411	77967486	(55829936)	C	HAL1ME	LINE/L1	(25)	2440	2366	486923
226	29.4	0.0	0.0	chr10	77967479	77967546	(55829876)	C	L1ME4b	LINE/L1	(112)	780	713	486924
192	33.3	0.0	0.0	chr10	77968129	77968194	(55829228)	C	MIRb	SINE/MIR	(179)	89	24	486925
289	31.2	5.1	7.2	chr10	78293289	78293482	(55503940)	C	MIRc	SINE/MIR	(71)	197	5	487548
16	21.1	0.0	0.0	chr10	78303349	78303387	(55494035)	+	(CCTCC)n	Simple_repeat	1	39	(0)	487571
13	19.0	0.0	5.0	chr10	78303451	78303490	(55493932)	+	(CCGC)n	Simple_repeat	1	40	(0)	487572
518	28.4	9.2	1.2	chr10	78807113	78807316	(54990106)	+	MIR	SINE/MIR	15	237	(25)	488493
342	34.7	1.6	0.8	chr10	78807339	78807463	(54989959)	+	MIR3	SINE/MIR	35	160	(48)	488494
212	31.8	6.1	2.7	chr10	78807726	78807835	(54989587)	C	L2c	LINE/L2	(179)	3208	3095	488495
1761	12.6	0.0	6.5	chr10	79904212	79904536	(53892886)	C	AluJo	SINE/Alu	(8)	304	1	490307
20	5.5	7.9	0.0	chr10	80216942	80216979	(53580443)	+	(AGGGTT)n	Simple_repeat	1	41	(0)	490888
450	30.6	10.1	3.5	chr10	80217180	80217413	(53580009)	+	MIRb	SINE/MIR	2	250	(18)	490889
2331	9.3	0.3	1.0	chr10	80260236	80260536	(53536886)	+	AluSx1	SINE/Alu	1	299	(13)	490964
12	15.6	7.3	5.1	chr10	84328520	84328574	(49468848)	+	(GCTGCGC)n	Simple_repeat	1	59	(0)	496706
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
6224	6.8	3.2	0.5	chr10	84525371	84526129	(49271293)	C	LTR17	LTR/ERV1	(0)	780	1	496994
6210	7.5	3.0	0.5	chr10	84530309	84531069	(49266353)	C	LTR17	LTR/ERV1	(0)	780	1	496996
5914	6.3	4.1	0.8	chr10	84565207	84565960	(49231462)	C	LTR17	LTR/ERV1	(0)	780	1	497046
4145	14.0	0.0	5.5	chr10	84566001	84566671	(49230751)	+	MER41B	LTR/ERV1	1	634	(0)	497047
886	24.4	1.0	1.9	chr10	84714590	84714794	(49082628)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	497254
559	24.0	5.2	11.4	chr10	84714838	84715044	(49082378)	C	MLT1B	LTR/ERVL-MaLR	(190)	184	1	497254
362	34.2	7.4	0.5	chr10	84715210	84715409	(49082013)	C	MIRb	SINE/MIR	(53)	215	1	497255
12	15.8	0.0	3.3	chr10	85635409	85635438	(48161984)	+	(CCCTG)n	Simple_repeat	1	30	(0)	498391
16	19.4	8.1	3.0	chr10	86365475	86365536	(47431886)	+	(CT)n	Simple_repeat	1	67	(0)	499366
17	26.5	1.4	2.7	chr10	86366525	86366555	(47430867)	+	(CCGGCT)n	Simple_repeat	1	29	(0)	499369
27	0.0	0.0	0.0	chr10	86366556	86366581	(47430841)	+	(CCCAG)n	Simple_repeat	1	26	(0)	499370
17	26.5	1.4	2.7	chr10	86366582	86366621	(47430801)	+	(CCGGCT)n	Simple_repeat	6	46	(0)	499371
30	16.5	0.0	5.3	chr10	86366807	86366881	(47430541)	+	(CCCCT)n	Simple_repeat	1	75	(0)	499372
2256	12.9	0.0	1.9	chr10	86593745	86594061	(47203361)	+	AluSx1	SINE/Alu	1	311	(1)	499818
176	23.6	3.9	2.5	chr10	86594062	86594576	(47202846)	+	GA-rich	Low_complexity	30	552	(0)	499819
277	28.7	11.6	0.0	chr10	86688744	86688865	(47108557)	C	Charlie22a	DNA/hAT-Charlie	(297)	194	57	499966
17	17.1	4.7	3.6	chr10	86756475	86756529	(47040893)	+	G-rich	Low_complexity	1	55	(0)	500080
17	16.1	2.3	2.2	chr10	86756568	86756611	(47040811)	+	(CCCGCC)n	Simple_repeat	1	45	(0)	500081
13	13.1	0.0	0.0	chr10	86756625	86756649	(47040773)	+	(CGG)n	Simple_repeat	1	25	(0)	500082
16	3.5	0.0	10.8	chr10	86756682	86756718	(47040704)	+	(AGG)n	Simple_repeat	1	37	(0)	500083
4548	9.6	2.2	1.6	chr10	86952397	86953503	(46843919)	C	MER11A	LTR/ERVK	(0)	1266	1	500469
24	22.0	3.1	1.5	chr10	87095016	87095080	(46702342)	+	(GC)n	Simple_repeat	1	67	(0)	500703
48	22.5	0.0	0.0	chr10	87095085	87095192	(46702230)	+	G-rich	Low_complexity	1	108	(0)	500704
13	17.6	2.4	4.7	chr10	87659773	87659814	(46137608)	+	GA-rich	Low_complexity	1	43	(0)	501619
28	0.0	0.0	0.0	chr10	87659882	87659907	(46137515)	+	(GCT)n	Simple_repeat	1	26	(0)	501620
13	0.0	0.0	0.0	chr10	87659908	87659924	(46137498)	+	(CGC)n	Simple_repeat	1	17	(0)	501621
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
1138	27.8	11.1	3.9	chr10	88528122	88528561	(45268861)	+	HAL1	LINE/L1	1392	1882	(625)	502954
2341	9.1	0.0	2.9	chr10	88528562	88528870	(45268552)	+	AluSz	SINE/Alu	1	300	(12)	502958
33	5.0	4.4	4.2	chr10	90858056	90858123	(42939299)	+	(CCG)n	Simple_repeat	1	71	(0)	506428
3371	12.2	7.7	3.2	chr10	93109672	93110008	(40687414)	C	LTR49	LTR/ERV1	(0)	595	232	510467
2258	9.6	3.2	0.0	chr10	93110009	93110310	(40687112)	C	AluSp	SINE/Alu	(0)	313	2	510468
369	15.0	1.6	0.0	chr10	93115926	93115985	(40681437)	+	LTR50	LTR/ERVL	21	81	(714)	510481
40	10.4	0.0	1.5	chr10	93116018	93116083	(40681339)	+	(AGGAGG)n	Simple_repeat	1	66	(0)	510482
504	23.5	19.7	1.1	chr10	93116084	93116529	(40680893)	+	LTR50	LTR/ERVL	152	789	(6)	510481
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
6436	9.0	2.5	0.1	chr10	95799146	95800112	(37997310)	C	L1PA13	LINE/L1	(4)	6159	5175	514923
7227	9.0	16.4	0.7	chr10	95800113	95801177	(37996245)	C	MER11A	LTR/ERVK	(0)	1266	1	514924
40	0.0	2.4	2.3	chr10	96229655	96229696	(37567726)	+	(TG)n	Simple_repeat	1	43	(0)	515592
318	20.2	19.3	3.7	chr10	96229886	96230054	(37567368)	+	MIR3	SINE/MIR	6	192	(16)	515593
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
15	25.1	2.8	4.1	chr10	96720434	96720504	(37076918)	+	G-rich	Low_complexity	1	73	(0)	516503
12	15.7	2.6	5.0	chr10	96720577	96720615	(37076807)	+	(GCCCGCG)n	Simple_repeat	1	40	(0)	516504
15	14.0	4.9	2.3	chr10	96720767	96720807	(37076615)	+	(GAGGTG)n	Simple_repeat	1	43	(0)	516505
12	18.1	3.1	0.0	chr10	96720925	96720956	(37076466)	+	GA-rich	Low_complexity	1	33	(0)	516506
415	33.3	6.6	4.7	chr10	96721089	96721324	(37076098)	C	MIRb	SINE/MIR	(2)	266	26	516507
20	5.5	4.8	4.5	chr10	96832407	96832448	(36964974)	+	(CCG)n	Simple_repeat	1	44	(0)	516802
22	24.1	1.4	2.7	chr10	96832658	96832729	(36964693)	+	(CCTCCC)n	Simple_repeat	1	73	(0)	516803
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
11	16.5	5.9	0.0	chr10	96832966	96832999	(36964423)	+	(GAGGTG)n	Simple_repeat	1	36	(0)	516805
402	7.1	8.0	0.5	chr10	97251079	97251792	(36545630)	+	GA-rich	Low_complexity	1	771	(0)	517560
469	26.9	7.2	3.3	chr10	97291984	97292163	(36505259)	C	MIRb	SINE/MIR	(10)	252	68	517638
3267	13.5	1.3	4.8	chr10	98126061	98126586	(35670836)	C	L1PB1	LINE/L1	(5720)	1143	636	519422
1169	16.8	0.5	0.0	chr10	98126587	98126783	(35670639)	C	L1PB1	LINE/L1	(6663)	200	3	519422
405	28.0	6.5	3.2	chr10	98135269	98135489	(35661933)	+	MIRc	SINE/MIR	10	238	(30)	519444
400	23.7	9.8	1.3	chr10	98574306	98574463	(35222959)	+	L1ME3G	LINE/L1	745	917	(7)	520147
6833	12.0	3.0	1.3	chr10	99479464	99481269	(34316153)	+	L1PA16	LINE/L1	4330	6166	(0)	521528
205	28.9	10.1	1.1	chr10	99732610	99732728	(34064694)	+	MIR	SINE/MIR	31	165	(103)	522006
26	21.1	6.3	3.4	chr10	100866467	100866577	(32930845)	+	(AGAGAC)n	Simple_repeat	1	118	(0)	524097
18	29.4	2.0	4.0	chr10	101285909	101286006	(32511416)	+	(CCTCCCC)n	Simple_repeat	1	100	(0)	524813
15	13.9	0.0	0.0	chr10	101286148	101286171	(32511251)	+	(G)n	Simple_repeat	1	24	(0)	524814
24	38.0	1.3	2.5	chr10	101291916	101292074	(32505348)	+	(CCCTCC)n	Simple_repeat	1	161	(0)	524822
11	27.1	2.3	0.0	chr10	101292355	101292398	(32505024)	+	(CCCGCC)n	Simple_repeat	1	45	(0)	524823
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
19	14.5	4.2	2.0	chr10	101818126	101818173	(31979249)	+	(CCTCTC)n	Simple_repeat	1	50	(0)	525732
13	15.5	9.3	0.0	chr10	101843685	101843727	(31953695)	+	(GGTCTGA)n	Simple_repeat	1	47	(0)	525776
17	11.2	0.0	8.7	chr10	101843776	101843821	(31953601)	+	(GCCGA)n	Simple_repeat	1	46	(0)	525777
16	19.0	0.0	0.0	chr10	101844022	101844058	(31953364)	+	G-rich	Low_complexity	1	37	(0)	525778
243	35.5	12.3	1.1	chr10	102122249	102122436	(31674986)	+	MIRb	SINE/MIR	27	238	(30)	526334
2371	8.0	0.3	0.7	chr10	102398932	102399233	(31398189)	+	AluSq	SINE/Alu	1	301	(12)	526857
363	32.3	11.4	2.5	chr10	102419932	102420131	(31377291)	+	MIRc	SINE/MIR	5	224	(44)	526880
234	31.6	6.9	0.0	chr10	102641789	102641883	(31155539)	+	MIRb	SINE/MIR	79	180	(88)	527305
12	15.3	3.5	0.0	chr10	102642298	102642326	(31155096)	+	(CGCCC)n	Simple_repeat	1	30	(0)	527306
20	6.7	0.0	3.0	chr10	102714290	102714322	(31083100)	+	(CCT)n	Simple_repeat	1	33	(0)	527438
36	20.6	3.5	3.4	chr10	102743955	102744068	(31053354)	+	GA-rich	Low_complexity	1	118	(0)	527500
634	21.6	8.4	4.8	chr10	102771280	102771531	(31025891)	+	FLAM_C	SINE/Alu	6	209	(93)	527563
2039	10.5	7.4	0.0	chr10	102771548	102771824	(31025598)	+	AluSz	SINE/Alu	1	299	(13)	527564
6582	4.8	19.9	10.7	chr10	102838109	102839243	(30958179)	C	MER11A	LTR/ERVK	(0)	1266	1	527695
18169	7.6	0.4	2.0	chr10	102841687	102844059	(30953363)	C	HERVK11-int	LTR/ERVK	(5618)	2335	1	527695
3898	10.8	6.0	2.8	chr10	102844065	102845149	(30952273)	C	MER11A	LTR/ERVK	(4)	1232	1	527695
1840	13.0	4.1	1.8	chr10	102927478	102927761	(30869661)	+	AluSx1	SINE/Alu	1	291	(21)	527872
1662	10.5	6.2	3.0	chr10	103350167	103350432	(30446990)	+	AluJo	SINE/Alu	12	286	(26)	528776
35	18.3	0.0	0.0	chr10	103350768	103350835	(30446587)	+	(TCC)n	Simple_repeat	1	68	(0)	528777
12	17.5	3.1	0.0	chr10	103350852	103350883	(30446539)	+	(CGGCTC)n	Simple_repeat	1	33	(0)	528778
16	19.6	6.7	1.6	chr10	103555148	103555228	(30242194)	+	(GTGCTGC)n	Simple_repeat	1	85	(0)	529199
14	17.1	3.0	0.0	chr10	103555279	103555311	(30242111)	+	GA-rich	Low_complexity	1	34	(0)	529200
17	18.9	2.4	0.0	chr10	103797714	103797755	(29999667)	+	G-rich	Low_complexity	1	43	(0)	529662
15	19.6	5.6	1.8	chr10	103855358	103855411	(29942011)	+	(GCCGCCC)n	Simple_repeat	1	57	(0)	529775
13	10.4	2.9	5.6	chr10	103855524	103855558	(29941864)	+	(CGCT)n	Simple_repeat	1	36	(0)	529776
12	26.3	0.0	5.5	chr10	103855577	103855631	(29941791)	+	(GGCGG)n	Simple_repeat	1	55	(0)	529777
17	20.7	2.9	5.7	chr10	103855745	103855812	(29941610)	+	GA-rich	Low_complexity	1	70	(0)	529778
17	20.7	3.6	7.0	chr10	103855804	103855886	(29941536)	+	G-rich	Low_complexity	1	86	(0)	529779
13	21.2	9.8	3.0	chr10	104231968	104232059	(29565363)	+	G-rich	Low_complexity	1	101	(0)	530386
14	30.7	0.0	0.0	chr10	110008207	110008254	(23789168)	+	(GGC)n	Simple_repeat	1	48	(0)	538775
16	0.0	0.0	0.0	chr10	110211074	110211090	(23586332)	+	(T)n	Simple_repeat	1	17	(0)	539109
12	30.0	1.3	5.2	chr10	110227530	110227605	(23569817)	+	GA-rich	Low_complexity	1	77	(0)	539142
19	17.3	0.0	0.0	chr10	110644577	110644615	(23152807)	+	(GCC)n	Simple_repeat	1	39	(0)	539928
15	15.9	2.9	0.0	chr10	110872100	110872134	(22925288)	+	G-rich	Low_complexity	1	36	(0)	540304
30	19.3	3.5	2.2	chr10	110919488	110919573	(22877849)	+	G-rich	Low_complexity	1	89	(0)	540372
24	9.6	0.0	6.0	chr10	110919593	110919642	(22877780)	+	GA-rich	Low_complexity	1	50	(0)	540373
1143	17.2	4.0	0.0	chr10	112130008	112130222	(21667200)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	542188
263	25.9	3.9	2.6	chr10	112130223	112130356	(21667066)	C	L2b	LINE/L2	(219)	3207	3086	542187
247	33.3	5.6	5.9	chr10	112130401	112130703	(21666719)	C	L2b	LINE/L2	(463)	2956	2655	542187
13	15.9	2.6	5.0	chr10	112949738	112949776	(20847646)	+	(ACC)n	Simple_repeat	1	40	(0)	543547
942	25.8	7.0	9.1	chr10	113046775	113047303	(20750119)	C	L1ME4a	LINE/L1	(83)	6041	5525	543706
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
2165	12.7	0.0	0.0	chr10	113536266	113536556	(20260866)	+	AluSz	SINE/Alu	1	291	(21)	544476
191	23.7	0.0	0.0	chr10	113536575	113536612	(20260810)	C	MIRc	SINE/MIR	(63)	205	168	544477
1480	12.0	0.4	7.1	chr10	113536786	113537037	(20260385)	+	L1PA16	LINE/L1	5931	6165	(1)	544478
2104	8.4	3.6	1.6	chr10	113671706	113672008	(20125414)	C	MER11A	LTR/ERVK	(0)	1266	958	544712
26736	4.3	0.2	0.1	chr10	113672009	113677564	(20119858)	+	L1PA4	LINE/L1	594	6154	(1)	544713
12	17.2	4.9	2.3	chr10	114043807	114043847	(19753575)	+	G-rich	Low_complexity	1	43	(0)	545302
34	10.4	4.8	0.0	chr10	114043898	114043960	(19753462)	+	(GCAGCG)n	Simple_repeat	1	66	(0)	545303
30	23.6	0.0	1.3	chr10	114043961	114043974	(19753448)	+	(GCG)n	Simple_repeat	1	77	(0)	545304
12	29.0	3.0	2.9	chr10	114044187	114044252	(19753170)	+	(GCC)n	Simple_repeat	1	68	(0)	545305
1720	10.1	0.0	0.0	chr10	114252682	114252898	(19544524)	C	AluSx1	SINE/Alu	(95)	217	1	545622
57	12.4	4.2	1.6	chr10	114253185	114253302	(19544120)	+	(CCTCTCC)n	Simple_repeat	1	123	(0)	545623
306	27.9	7.7	5.2	chr10	114265446	114265611	(19531811)	C	MIR3	SINE/MIR	(31)	177	3	545644
2874	6.0	0.0	0.0	chr10	115677393	115677745	(18119677)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	547733
2172	20.9	2.0	5.8	chr10	115677746	115678127	(18119295)	C	LTR55	LTR/ERVL?	(183)	365	1	547732
16	13.6	0.0	11.5	chr10	116742236	116742241	(17055181)	+	(CCGGCC)n	Simple_repeat	1	57	(0)	549278
18	16.6	2.0	3.9	chr10	116742242	116742292	(17055130)	+	(CCGGCCC)n	Simple_repeat	1	52	(0)	549279
17	16.4	4.9	0.0	chr10	117139801	117139841	(16657581)	+	(CCG)n	Simple_repeat	1	43	(0)	549934
7800	3.0	0.7	0.1	chr10	117810890	117811887	(15985535)	+	L1PA3	LINE/L1	5155	6155	(0)	551110
1237	22.8	14.7	3.5	chr10	117811904	117812299	(15985123)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	551111
199	18.8	4.0	7.7	chr10	117925361	117925412	(15872010)	+	L2a	LINE/L2	3349	3398	(28)	551295
409	23.6	16.1	6.2	chr10	117925557	117925750	(15871672)	C	MamRep38	DNA/hAT	(78)	217	1	551300
15	18.9	0.0	8.8	chr10	119104378	119104434	(14692988)	+	(CCCG)n	Simple_repeat	1	57	(0)	553223
24	16.1	2.9	4.3	chr10	119104543	119104610	(14692812)	+	(GGCGC)n	Simple_repeat	1	70	(0)	553224
332	32.3	6.9	4.7	chr10	119298698	119299107	(14498315)	+	L2c	LINE/L2	2952	3387	(0)	553639
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
54	0.0	0.0	0.0	chr10	120330965	120331010	(13466412)	+	(AT)n	Simple_repeat	1	46	(0)	555471
405	11.7	0.0	0.0	chr10	120331013	120331072	(13466350)	C	L1MB3	LINE/L1	(34)	6149	6090	555472
330	31.9	1.8	4.8	chr10	120331126	120331231	(13466191)	+	L2a	LINE/L2	3157	3259	(167)	555473
15993	13.0	2.1	1.4	chr10	120331232	120333508	(13463914)	+	Tigger1	DNA/TcMar-Tigger	3	2296	(122)	555474
17	14.9	4.2	4.0	chr10	120456901	120456948	(13340474)	+	(GGC)n	Simple_repeat	1	50	(0)	555677
23	18.9	1.9	0.0	chr10	120457144	120457197	(13340225)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	555678
2086	14.9	4.2	4.7	chr10	120837522	120837949	(12959473)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	556280
1776	23.0	8.5	2.5	chr10	120989627	120990246	(12807176)	+	MER61-int	LTR/ERV1	109	601	(6490)	556481
4352	17.0	3.3	3.1	chr10	120990364	120992022	(12805400)	+	MER61-int	LTR/ERV1	601	3599	(4217)	556481
126	12.6	4.0	3.5	chr10	121171714	121171988	(12625434)	+	G-rich	Low_complexity	1	286	(0)	556742
584	25.0	10.7	4.2	chr10	121563605	121563796	(12233626)	C	MIR	SINE/MIR	(37)	225	20	557336
635	18.3	17.1	4.8	chr10	121563950	121564138	(12233284)	C	MER20	DNA/hAT-Charlie	(2)	217	1	557337
498	16.8	0.2	0.3	chr10	121648842	121648933	(12148489)	C	MLT1B	LTR/ERVL-MaLR	(54)	413	258	557480
16	9.3	0.0	0.0	chr10	123274835	123274857	(10522565)	+	(A)n	Simple_repeat	1	23	(0)	560052
11	14.2	0.0	8.1	chr10	123275014	123275050	(10522372)	+	G-rich	Low_complexity	1	37	(0)	560053
176	22.2	3.8	1.5	chr10	123972200	123972704	(9824718)	+	GA-rich	Low_complexity	1	524	(0)	561180
12	27.3	2.0	2.0	chr10	124916806	124916855	(8880567)	+	(GGC)n	Simple_repeat	1	51	(0)	562764
16	10.1	2.9	2.9	chr10	124917084	124917117	(8880305)	+	(GGC)n	Simple_repeat	1	35	(0)	562765
39	2.6	0.0	0.0	chr10	124917175	124917214	(8880208)	+	(CGC)n	Simple_repeat	1	40	(0)	562766
17	16.4	0.0	0.0	chr10	124917226	124917259	(8880163)	+	GA-rich	Low_complexity	1	34	(0)	562767
20	14.0	0.0	2.4	chr10	125160177	125160217	(8637205)	+	(CTC)n	Simple_repeat	1	41	(0)	563048
14	28.9	1.8	1.7	chr10	125160234	125160290	(8637132)	+	(GGC)n	Simple_repeat	1	58	(0)	563049
18	29.8	0.0	4.0	chr10	125160363	125160437	(8636985)	+	(GGC)n	Simple_repeat	1	75	(0)	563050
15	16.6	0.0	0.0	chr10	125160530	125160556	(8636866)	+	(AC)n	Simple_repeat	1	27	(0)	563051
49	27.0	2.6	2.6	chr10	125160575	125160764	(8636658)	+	(CTCCC)n	Simple_repeat	1	195	(0)	563052
12	4.3	8.3	0.0	chr10	125161036	125161059	(8636363)	+	(TCGC)n	Simple_repeat	1	26	(0)	563053
16	15.3	0.0	5.0	chr10	125161208	125161247	(8636175)	+	(GCGG)n	Simple_repeat	1	40	(0)	563054
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
198	25.8	0.0	2.9	chr10	126162301	126162368	(7635054)	C	L2c	LINE/L2	(297)	3090	3025	564503
13	25.1	0.0	3.9	chr10	126272482	126272532	(7524890)	+	(TTATTAA)n	Simple_repeat	1	51	(0)	564642
19	0.0	0.0	0.0	chr10	128019634	128019657	(5777765)	+	(CATT)n	Simple_repeat	1	24	(0)	566931
32	18.6	0.0	0.0	chr10	128020023	128020080	(5777342)	+	(TG)n	Simple_repeat	1	58	(0)	566932
332	21.5	0.0	10.6	chr10	128149649	128149752	(5647670)	+	Charlie8	DNA/hAT-Charlie	88	180	(2248)	567083
49	0.0	8.1	0.0	chr10	128210368	128210429	(5586993)	+	(CGGGGA)n	Simple_repeat	1	67	(0)	567180
13	20.3	0.0	4.7	chr10	128210737	128210779	(5586643)	+	(GCCCC)n	Simple_repeat	1	43	(0)	567181
50	2.2	0.0	0.0	chr10	129518328	129518374	(4279048)	+	(AC)n	Simple_repeat	1	47	(0)	568589
503	19.1	0.9	0.9	chr10	129518376	129518481	(4278941)	+	Tigger2a	DNA/TcMar-Tigger	4	109	(325)	568590
1842	18.3	6.7	1.3	chr10	129518494	129518891	(4278531)	+	Tigger2	DNA/TcMar-Tigger	2298	2718	(0)	568591
15	24.5	2.0	2.0	chr10	129816052	129816101	(3981321)	+	(CCA)n	Simple_repeat	1	51	(0)	568814
53	28.4	3.4	1.9	chr10	129945044	129945248	(3852174)	+	G-rich	Low_complexity	1	212	(0)	568912
6583	8.7	17.1	2.5	chr10	130117324	130118400	(3679022)	C	MER11A	LTR/ERVK	(0)	1266	1	569130
18	22.4	0.0	0.0	chr10	130203870	130203906	(3593516)	+	(C)n	Simple_repeat	1	37	(0)	569250
22	2.1	11.5	3.5	chr10	130203907	130203920	(3593502)	+	(GCCC)n	Simple_repeat	2	58	(0)	569251
65	23.1	0.0	3.4	chr10	132167725	132167902	(1629520)	+	(CCCCTCA)n	Simple_repeat	1	178	(0)	571393
136	22.1	0.7	0.3	chr10	132172936	132173222	(1624200)	+	(TCTC)n	Simple_repeat	1	289	(0)	571396
949	30.7	7.8	1.5	chr10	132173226	132173679	(1623743)	C	L1MC4a	LINE/L1	(1258)	6624	6152	571394
234	29.7	11.6	0.0	chr10	132247477	132247621	(1549801)	C	L2c	LINE/L2	(191)	3196	3033	571451
2298	11.9	0.0	0.0	chr10	132312758	132313067	(1484355)	+	AluSz6	SINE/Alu	1	310	(2)	571507
1708	14.2	18.4	3.8	chr10	132313068	132313324	(1484098)	+	MER49	LTR/ERV1	86	386	(537)	571506
336	36.7	8.5	3.8	chr10	132313396	132313822	(1483600)	C	L2b	LINE/L2	(11)	3364	2916	571508
418	22.7	3.2	0.0	chr10	132436598	132436716	(1360706)	+	MER53	DNA/hAT	19	141	(52)	571639
998	29.7	9.7	5.3	chr10	133171916	133172711	(624711)	C	L1M5	LINE/L1	(1818)	4328	3460	572222
1766	16.0	0.0	3.7	chr10	133172712	133173011	(624411)	+	AluJr	SINE/Alu	1	289	(23)	572225
18	15.0	2.1	4.1	chr10	133357590	133357637	(439785)	+	(CCAGGCC)n	Simple_repeat	1	49	(0)	572434
72	1.3	2.5	1.2	chr10	133373682	133373761	(423661)	+	(CTGCCCGC)n	Simple_repeat	1	82	(0)	572451
232	25.6	12.0	0.0	chr10	133373812	133373936	(423486)	+	Zaphod	DNA/hAT-Tip100	663	804	(3227)	572452
421	23.7	12.9	2.9	chr10	133519764	133519902	(277520)	+	L1M5	LINE/L1	5636	5790	(452)	572590
284	20.4	2.3	2.1	chr10	133520013	133520101	(277321)	+	L1ME3D	LINE/L1	5963	6055	(188)	572594
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
11	21.0	2.5	2.4	chr11	375408	375447	(134711175)	+	(CCCTGA)n	Simple_repeat	1	41	(0)	573340
15	18.2	2.1	4.2	chr11	376174	376220	(134710402)	+	(GGCGG)n	Simple_repeat	1	48	(0)	573341
2400	5.8	0.3	0.3	chr11	518188	518481	(134568141)	C	AluY	SINE/Alu	(17)	294	1	573498
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
69	13.2	2.1	2.8	chr11	555141	555280	(134531342)	+	G-rich	Low_complexity	1	143	(0)	573557
12	25.2	5.2	1.6	chr11	555572	555629	(134530993)	+	G-rich	Low_complexity	1	61	(0)	573558
19	23.2	2.4	5.8	chr11	576493	576576	(134510046)	+	(CGG)n	Simple_repeat	1	86	(0)	573583
17	19.5	3.5	3.4	chr11	576689	576745	(134509877)	+	G-rich	Low_complexity	1	59	(0)	573584
421	27.8	2.3	3.1	chr11	577122	577251	(134509371)	C	MIRb	SINE/MIR	(39)	229	101	573585
1409	31.0	7.5	3.2	chr11	628048	628757	(134457865)	C	L1MB3	LINE/L1	(114)	6069	5327	573647
11753	10.1	0.4	1.9	chr11	1265078	1266243	(133820379)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	439	574420
2168	10.2	1.7	0.0	chr11	1266244	1266527	(133820095)	C	AluSx	SINE/Alu	(23)	289	1	574421
19	22.6	0.0	0.0	chr11	1272369	1272409	(133814213)	+	(C)n	Simple_repeat	1	41	(0)	574428
318	35.8	9.4	4.8	chr11	1272882	1273213	(133813409)	+	L1MEd	LINE/L1	5017	5365	(781)	574422
14	13.2	2.9	2.8	chr11	1383372	1383406	(133703216)	+	GA-rich	Low_complexity	1	36	(0)	574563
2181	11.6	0.0	1.0	chr11	1383658	1383823	(133702799)	C	AluSx	SINE/Alu	(13)	299	136	574564
2117	12.8	0.3	1.0	chr11	1419629	1419932	(133666690)	+	AluSz	SINE/Alu	1	302	(10)	574603
441	26.4	11.7	6.4	chr11	1419933	1419953	(133666669)	C	HAL1ME	LINE/L1	(1468)	997	975	574602
22	24.5	0.0	0.0	chr11	1420130	1420184	(133666438)	+	(GTGC)n	Simple_repeat	1	55	(0)	574604
11	26.9	3.3	3.2	chr11	1547181	1547241	(133539381)	+	(CGCGCCC)n	Simple_repeat	1	63	(0)	574728
1459	8.1	0.0	4.1	chr11	1617701	1617897	(133468725)	C	AluY	SINE/Alu	(17)	294	106	574848
960	30.4	7.8	4.7	chr11	1617901	1618456	(133468166)	+	Tigger18a	DNA/TcMar-Tigger	103	677	(175)	574849
14	4.9	0.0	0.0	chr11	1970040	1970060	(133116562)	+	(GGGA)n	Simple_repeat	1	21	(0)	575296
46	2.2	0.0	0.0	chr11	2014779	2014824	(133071798)	+	(CCT)n	Simple_repeat	1	46	(0)	575330
360	25.3	17.0	9.0	chr11	3096646	3096842	(131989780)	+	L1MC5	LINE/L1	9065	9174	(130)	576575
344	34.5	8.0	0.7	chr11	3097175	3097477	(131989145)	+	L1MEd	LINE/L1	213	539	(6547)	576578
14	23.9	0.0	7.9	chr11	3165324	3165386	(131921236)	+	GA-rich	Low_complexity	1	63	(0)	576656
59	4.8	0.0	0.0	chr11	3217022	3217085	(131869537)	+	(TC)n	Simple_repeat	1	64	(0)	576735
15	24.8	3.4	1.6	chr11	3217200	3217258	(131869364)	+	GA-rich	Low_complexity	1	61	(0)	576736
22390	14.6	4.0	3.6	chr11	3353238	3357886	(131728736)	C	HERVFH21-int	LTR/ERV1	(1791)	4738	1	576906
14	20.3	0.0	10.1	chr11	3423223	3423291	(131663331)	+	(GGCGG)n	Simple_repeat	1	69	(0)	577000
15	30.9	0.0	5.1	chr11	3423415	3423493	(131663129)	+	G-rich	Low_complexity	1	79	(0)	577001
13	24.2	2.3	0.0	chr11	3642034	3642077	(131444545)	+	(CCCGCCC)n	Simple_repeat	1	45	(0)	577375
1423	15.4	12.2	0.8	chr11	3911418	3911677	(131174945)	C	AluJr4	SINE/Alu	(17)	295	2	577985
188	38.5	3.5	7.1	chr11	3911687	3911896	(131174726)	+	L2b	LINE/L2	3081	3282	(93)	577984
16	4.5	0.0	0.0	chr11	3911903	3911925	(131174697)	+	(TTG)n	Simple_repeat	1	23	(0)	577986
55	22.0	4.4	4.2	chr11	3912089	3912291	(131174331)	+	(CCTTC)n	Simple_repeat	1	212	(0)	577987
2202	11.2	0.3	0.3	chr11	3912372	3912665	(131173957)	C	AluSq2	SINE/Alu	(19)	294	1	577988
21	17.2	3.1	4.5	chr11	4393705	4393768	(130692854)	+	GA-rich	Low_complexity	1	66	(0)	578776
708	29.2	4.7	0.0	chr11	4615764	4615965	(130470657)	+	LTR16C	LTR/ERVL	147	358	(131)	578980
470	27.3	6.7	13.1	chr11	4615959	4616232	(130470390)	+	LTR16C	LTR/ERVL	235	489	(0)	578981
56	0.0	0.0	0.0	chr11	6259502	6259549	(128827073)	+	(TC)n	Simple_repeat	1	48	(0)	581035
20	26.3	0.0	6.5	chr11	6259746	6259837	(128826785)	+	G-rich	Low_complexity	1	92	(0)	581036
17	14.9	2.0	5.9	chr11	6473359	6473408	(128613214)	+	G-rich	Low_complexity	1	51	(0)	581383
14	4.3	0.0	7.1	chr11	6473466	6473514	(128613108)	+	(CCA)n	Simple_repeat	1	45	(0)	581384
21	21.5	2.4	5.8	chr11	6473843	6473926	(128612696)	+	(GCCCGC)n	Simple_repeat	1	86	(0)	581385
19	24.5	3.7	3.5	chr11	6474009	6474090	(128612532)	+	(CCCG)n	Simple_repeat	1	85	(0)	581386
15	8.2	4.3	8.3	chr11	6603741	6603786	(128482836)	+	G-rich	Low_complexity	1	48	(0)	581571
17	29.6	0.0	2.9	chr11	6611930	6611998	(128474624)	+	(CCCCG)n	Simple_repeat	1	69	(0)	581578
429	31.9	4.2	3.6	chr11	6612778	6612969	(128473653)	C	L2c	LINE/L2	(12)	3375	3183	581579
17	8.8	0.0	9.1	chr11	6655508	6655551	(128431071)	+	(GGCG)n	Simple_repeat	1	44	(0)	581616
2274	10.2	0.0	3.2	chr11	7589312	7589624	(127496998)	+	AluSc	SINE/Alu	1	303	(6)	582855
15	27.3	3.2	1.5	chr11	8871239	8871301	(126215321)	+	GA-rich	Low_complexity	1	65	(0)	584652
13	27.1	0.0	2.2	chr11	9573405	9573450	(125513172)	+	G-rich	Low_complexity	1	46	(0)	586106
12	21.1	0.0	7.8	chr11	9664024	9664074	(125422548)	+	G-rich	Low_complexity	1	51	(0)	586301
291	24.2	10.8	0.8	chr11	9758475	9758607	(125328015)	C	MIR	SINE/MIR	(68)	194	47	586501
15	31.9	2.1	7.0	chr11	10931608	10931747	(124154875)	+	G-rich	Low_complexity	1	143	(0)	588402
1157	27.5	8.2	2.3	chr11	11279370	11279906	(123806716)	+	L1ME3A	LINE/L1	5582	6173	(0)	588945
27	13.7	3.7	6.0	chr11	12674441	12674521	(122412101)	+	(CGCCG)n	Simple_repeat	1	84	(0)	591160
15	17.7	6.7	0.0	chr11	12674718	12674770	(122411852)	+	G-rich	Low_complexity	1	56	(0)	591161
14	28.0	3.3	0.0	chr11	12674842	12674901	(122411721)	+	G-rich	Low_complexity	1	62	(0)	591162
190	30.6	7.6	1.2	chr11	12800262	12800347	(122286275)	+	MIRc	SINE/MIR	39	130	(138)	591348
245	30.2	5.4	0.0	chr11	12800378	12800483	(122286139)	C	L2a	LINE/L2	(35)	3391	3280	591349
11	25.0	5.6	4.0	chr11	13668410	13668481	(121418141)	+	(CTCCCG)n	Simple_repeat	1	76	(0)	592645
981	18.3	4.4	0.0	chr11	14252811	14252985	(120833637)	C	MER5A	DNA/hAT-Charlie	(6)	183	1	593556
567	28.0	3.5	6.4	chr11	14253308	14253540	(120833082)	C	MIR	SINE/MIR	(16)	246	21	593557
1476	19.8	1.4	1.1	chr11	14276310	14276587	(120810035)	+	AluJr	SINE/Alu	4	282	(30)	593597
23	18.3	1.4	5.6	chr11	14276604	14276673	(120809949)	+	GA-rich	Low_complexity	1	71	(0)	593598
13	11.1	0.0	5.9	chr11	14276690	14276708	(120809914)	+	(TAA)n	Simple_repeat	1	17	(0)	593599
2019	8.6	5.3	0.0	chr11	14276709	14276977	(120809645)	+	AluSg7	SINE/Alu	2	285	(24)	593600
24	14.7	0.0	0.0	chr11	14499566	14499610	(120587012)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	594061
1347	28.4	5.2	5.9	chr11	14659897	14660301	(120426321)	C	LTR82A	LTR/ERVL	(172)	700	281	594324
1953	15.6	0.7	1.7	chr11	14660302	14660603	(120426019)	C	AluSx3	SINE/Alu	(12)	299	1	594325
18	19.8	2.0	2.0	chr11	16348012	16348060	(118738562)	+	GA-rich	Low_complexity	1	50	(0)	596889
20	20.5	1.3	6.5	chr11	16606964	16607004	(118479618)	+	(CTCCCC)n	Simple_repeat	1	75	(0)	597234
16	9.8	6.1	0.0	chr11	16607005	16607037	(118479585)	+	(CCT)n	Simple_repeat	1	35	(0)	597235
13	15.0	2.4	4.8	chr11	16607057	16607097	(118479525)	+	(CGCCCGG)n	Simple_repeat	1	42	(0)	597236
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
14	21.5	2.2	2.2	chr11	17353526	17353570	(117733052)	+	G-rich	Low_complexity	1	46	(0)	598618
13	0.0	0.0	0.0	chr11	17353714	17353730	(117732892)	+	(GCA)n	Simple_repeat	1	17	(0)	598619
13	6.3	8.1	5.0	chr11	17476570	17476606	(117610016)	+	(CCT)n	Simple_repeat	1	40	(0)	598820
22	27.5	3.2	4.7	chr11	17476825	17476948	(117609674)	+	(CCCCG)n	Simple_repeat	1	128	(0)	598821
189	26.8	7.6	3.0	chr11	17672097	17672196	(117414426)	C	OldhAT1	DNA/hAT-Ac	(2314)	534	430	599126
884	25.7	0.8	1.2	chr11	19039465	19039712	(116046910)	+	L1M3de	LINE/L1	2350	2596	(4253)	601523
20757	11.1	2.1	1.4	chr11	19039724	19046131	(116040491)	+	L1PA10	LINE/L1	12	6483	(0)	601526
769	28.6	2.9	0.0	chr11	19116660	19116858	(115969764)	C	MIR	SINE/MIR	(3)	259	55	601651
14	25.3	0.0	0.0	chr11	19116935	19116976	(115969646)	+	G-rich	Low_complexity	1	42	(0)	601652
15	15.8	4.5	2.2	chr11	19241668	19241711	(115844911)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	601846
18	8.7	0.0	0.0	chr11	19241814	19241838	(115844784)	+	(T)n	Simple_repeat	1	25	(0)	601847
25	25.2	3.6	3.5	chr11	19346201	19346310	(115740312)	+	(TCTG)n	Simple_repeat	1	114	(0)	602040
17	12.1	2.6	2.6	chr11	19346430	19346467	(115740155)	+	G-rich	Low_complexity	1	39	(0)	602041
6320	9.3	16.7	3.4	chr11	20538369	20539460	(114547162)	+	MER11A	LTR/ERVK	1	1266	(0)	604102
456	25.8	7.2	0.0	chr11	22192262	22192389	(112894233)	C	MIR	SINE/MIR	(79)	183	46	606580
4651	4.8	0.9	0.0	chr11	25461196	25462190	(109624432)	C	L1P1	LINE/L1	(366)	5789	4790	611115
2365	8.4	0.7	1.6	chr11	25462192	25462500	(109624122)	+	AluY	SINE/Alu	1	306	(5)	611116
5622	12.0	17.7	0.8	chr11	27135407	27136456	(107950166)	+	MER11A	LTR/ERVK	1	1266	(0)	613459
4441	15.2	3.7	3.0	chr11	27136457	27137039	(107949583)	+	L1MCa	LINE/L1	1230	1821	(4687)	613458
243	21.8	5.2	3.5	chr11	27576056	27576112	(107510510)	+	L2c	LINE/L2	3324	3381	(6)	614190
2161	25.9	2.4	1.9	chr11	27851204	27851743	(107234879)	+	MLT1F2	LTR/ERVL-MaLR	18	560	(0)	614642
194	11.2	6.0	1.9	chr11	27851746	27852144	(107234478)	+	(TTCC)n	Simple_repeat	1	423	(0)	614643
5634	14.8	7.2	4.2	chr11	29104854	29106079	(105980543)	+	MER11A	LTR/ERVK	1	1266	(0)	616510
19354	14.1	2.7	1.9	chr11	32126255	32131541	(102955081)	+	L1PA16	LINE/L1	497	6104	(682)	621053
12	16.5	5.9	0.0	chr11	32892771	32892804	(102193818)	+	(GGCGG)n	Simple_repeat	1	36	(0)	622439
19	20.9	5.9	1.4	chr11	33257311	33257378	(101829244)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	623167
19	0.0	3.3	3.2	chr11	33257658	33257687	(101828935)	+	(AGC)n	Simple_repeat	1	31	(0)	623168
202	26.2	4.7	1.6	chr11	33375595	33375656	(101710966)	+	L2a	LINE/L2	3356	3419	(7)	623382
19	21.2	5.3	1.7	chr11	33375999	33376055	(101710567)	+	(CG)n	Simple_repeat	1	60	(0)	623388
22	24.3	2.9	0.0	chr11	33376190	33376257	(101710365)	+	(AGCGAGG)n	Simple_repeat	1	70	(0)	623389
11	18.8	4.3	4.2	chr11	33376694	33376739	(101709883)	+	G-rich	Low_complexity	1	48	(0)	623390
234	25.2	2.6	8.3	chr11	36259652	36259772	(98826850)	+	L2c	LINE/L2	2976	3089	(298)	628137
6149	9.5	17.6	1.5	chr11	38089354	38090412	(96996210)	+	MER11A	LTR/ERVK	1	1266	(0)	630753
50	27.6	3.9	3.7	chr11	43556499	43556730	(91529892)	+	(CTCC)n	Simple_repeat	1	241	(0)	638658
12	19.4	4.7	2.2	chr11	43579413	43579455	(91507167)	+	G-rich	Low_complexity	1	45	(0)	638677
12	14.8	7.5	2.3	chr11	43579542	43579581	(91507041)	+	(GGTC)n	Simple_repeat	1	43	(0)	638678
2978	14.6	6.7	1.9	chr11	44065253	44065789	(91020833)	+	MER34B	LTR/ERV1	1	565	(0)	639503
2002	12.4	0.7	0.0	chr11	44620821	44621093	(90465529)	+	AluSz	SINE/Alu	36	310	(2)	640492
16	19.6	0.0	0.0	chr11	44621095	44621124	(90465498)	+	GA-rich	Low_complexity	1	30	(0)	640493
233	28.9	7.8	3.5	chr11	44621416	44621501	(90465121)	C	MER5A	DNA/hAT-Charlie	(37)	152	63	640494
13	12.5	6.1	5.8	chr11	44726790	44726838	(90359784)	+	(GAGGAGGC)n	Simple_repeat	1	52	(0)	640716
20	23.8	3.9	0.7	chr11	44726869	44726961	(90359661)	+	G-rich	Low_complexity	1	95	(0)	640717
69	3.9	0.0	2.4	chr11	44727043	44727126	(90359496)	+	(CCCGGC)n	Simple_repeat	1	84	(0)	640718
381	31.2	7.8	0.7	chr11	44729878	44730019	(90356603)	+	MIR3	SINE/MIR	35	187	(21)	640721
335	26.0	6.1	14.7	chr11	45011128	45011214	(90075408)	+	MER117	DNA/hAT-Charlie	10	99	(98)	641323
760	21.6	2.7	6.6	chr11	45011215	45011442	(90075180)	+	MER20	DNA/hAT-Charlie	1	219	(0)	641324
335	26.0	6.1	14.7	chr11	45011443	45011552	(90075070)	+	MER117	DNA/hAT-Charlie	100	189	(8)	641323
388	14.3	1.4	0.0	chr11	45011603	45011672	(90074950)	C	MSTB	LTR/ERVL-MaLR	(0)	426	356	641325
1027	6.2	0.0	0.0	chr11	45011673	45011800	(90074822)	C	L1PA8	LINE/L1	(276)	5896	5769	641326
871	19.6	6.3	0.0	chr11	45340580	45340758	(89745864)	C	MER58B	DNA/hAT-Charlie	(0)	341	151	641911
17	7.0	3.3	0.0	chr11	45900083	45900124	(89186498)	+	(CGGCCC)n	Simple_repeat	1	43	(0)	642997
15	18.0	4.3	2.1	chr11	46120708	46120753	(88965869)	+	(TCCC)n	Simple_repeat	1	48	(0)	643309
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
21	25.1	4.2	3.0	chr11	46121485	46121519	(88965103)	+	(CGCCCG)n	Simple_repeat	1	94	(0)	643317
26	7.9	7.3	1.7	chr11	46121520	46121574	(88965048)	+	(CCG)n	Simple_repeat	1	59	(0)	643318
13	6.8	0.0	10.5	chr11	46121702	46121753	(88964869)	+	(CCGGCC)n	Simple_repeat	1	46	(0)	643319
2021	16.1	0.0	0.6	chr11	46202014	46202324	(88884298)	C	AluJb	SINE/Alu	(1)	311	3	643478
196	32.4	7.2	6.8	chr11	46202477	46202673	(88883949)	+	L2a	LINE/L2	2960	3158	(229)	643479
23	27.5	4.4	2.5	chr11	46381538	46381651	(88704971)	+	G-rich	Low_complexity	1	119	(0)	643863
19	14.4	5.3	3.3	chr11	46918068	46918124	(88168498)	+	(CCCGGA)n	Simple_repeat	1	60	(0)	644902
13	21.3	4.5	5.7	chr11	46918203	46918269	(88168353)	+	G-rich	Low_complexity	1	70	(0)	644903
1604	12.6	0.0	6.9	chr11	47214511	47214787	(87871835)	+	AluJo	SINE/Alu	42	299	(13)	645475
12	16.8	0.0	5.4	chr11	47214886	47214922	(87871700)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	645476
2436	5.5	0.7	0.0	chr11	47943404	47943693	(87142929)	C	AluSp	SINE/Alu	(20)	293	2	647167
15	30.1	0.0	1.7	chr11	47943694	47943713	(87142909)	+	(TAA)n	Simple_repeat	3	22	(0)	647168
12	30.0	3.2	1.5	chr11	47943713	47943775	(87142847)	+	G-rich	Low_complexity	1	65	(0)	647169
302	23.6	15.4	5.0	chr11	47943801	47943933	(87142689)	C	MIRb	SINE/MIR	(74)	194	34	647170
21	16.7	4.7	3.0	chr11	47980765	47980835	(87105787)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	647277
12	18.2	4.6	7.3	chr11	47980942	47980959	(87105663)	+	(GCCTGC)n	Simple_repeat	1	42	(26)	647278
21	5.5	7.9	0.0	chr11	47980960	47980997	(87105625)	+	(GCT)n	Simple_repeat	1	41	(0)	647279
12	18.2	4.6	7.3	chr11	47980998	47981006	(87105616)	+	(GCCTGC)n	Simple_repeat	43	68	(0)	647278
239	35.6	1.9	1.0	chr11	48029465	48029566	(87057056)	+	MIRb	SINE/MIR	80	182	(86)	647403
227	23.7	5.0	7.3	chr11	57657196	57657277	(77429345)	C	L2a	LINE/L2	(0)	3426	3347	654218
15	0.0	5.3	0.0	chr11	58579066	58579084	(76507538)	+	(GC)n	Simple_repeat	1	20	(0)	655686
17	14.4	0.0	0.0	chr11	58579218	58579248	(76507374)	+	(CGC)n	Simple_repeat	1	31	(0)	655687
14	12.5	0.0	0.0	chr11	58579456	58579481	(76507141)	+	(GCC)n	Simple_repeat	1	26	(0)	655688
13	4.8	0.0	4.2	chr11	59172094	59172117	(75914505)	+	(GGGA)n	Simple_repeat	1	24	(0)	656440
12	17.6	4.0	5.8	chr11	59172219	59172268	(75914354)	+	(GCCGCCG)n	Simple_repeat	1	52	(0)	656441
18	30.1	0.0	1.6	chr11	59755459	59755521	(75331101)	+	(GCC)n	Simple_repeat	1	63	(0)	657377
12	25.7	3.4	3.3	chr11	59755744	59755802	(75330820)	+	(CCCTC)n	Simple_repeat	1	61	(0)	657378
5077	9.6	4.7	0.7	chr11	60367665	60368397	(74718225)	+	LTR17	LTR/ERV1	1	764	(16)	658255
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
39	0.0	0.0	0.0	chr11	61972141	61972176	(73114446)	+	(GGAG)n	Simple_repeat	1	36	(0)	661194
2277	11.9	0.0	0.0	chr11	62439666	62439967	(72646655)	C	AluSx1	SINE/Alu	(10)	302	1	662078
355	21.4	2.8	0.0	chr11	62440017	62440086	(72646536)	C	MER20	DNA/hAT-Charlie	(0)	219	148	662079
394	22.4	3.9	0.0	chr11	62440190	62440287	(72646335)	C	MIR3	SINE/MIR	(6)	202	101	662080
2112	8.0	0.4	0.0	chr11	62549407	62549668	(72536954)	+	AluSx	SINE/Alu	33	295	(17)	662286
1942	10.6	0.7	1.1	chr11	62549898	62550210	(72536412)	C	AluSx	SINE/Alu	(0)	312	12	662287
13	18.9	4.5	2.2	chr11	62602409	62602452	(72484170)	+	G-rich	Low_complexity	1	46	(0)	662389
28	7.9	0.0	0.0	chr11	62726895	62726934	(72359688)	+	(CCT)n	Simple_repeat	1	40	(0)	662641
18	25.8	1.8	0.0	chr11	62771426	62771480	(72315142)	+	(CGC)n	Simple_repeat	1	56	(0)	662766
221	28.3	0.0	1.6	chr11	62771868	62771928	(72314694)	C	MIRc	SINE/MIR	(120)	148	89	662767
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
11	10.0	5.6	5.3	chr11	63681455	63681490	(71405132)	+	(CGCGCT)n	Simple_repeat	1	38	(0)	664163
12	30.1	0.0	3.6	chr11	63768737	63768792	(71317830)	+	(GGCC)n	Simple_repeat	1	56	(0)	664341
1935	11.8	0.0	0.0	chr11	63783773	63784044	(71302578)	+	AluSz6	SINE/Alu	1	272	(40)	664379
32	2.9	0.0	0.0	chr11	63784047	63784081	(71302541)	+	(GGGGA)n	Simple_repeat	1	35	(0)	664380
8126	16.4	7.7	7.2	chr11	63784082	63785309	(71301313)	+	L1MCa	LINE/L1	1345	2516	(5125)	664373
25	18.2	0.0	1.7	chr11	63813530	63813587	(71273035)	+	G-rich	Low_complexity	1	58	(0)	664464
13	13.2	0.0	0.0	chr11	63813744	63813768	(71272854)	+	(GAG)n	Simple_repeat	1	25	(0)	664465
12	12.6	0.0	3.6	chr11	63919586	63919613	(71167009)	+	G-rich	Low_complexity	1	28	(0)	664648
2538	6.1	0.0	0.6	chr11	63975166	63975476	(71111146)	C	AluSc	SINE/Alu	(0)	309	1	664777
12	29.5	1.6	3.2	chr11	64165782	64165842	(70920780)	+	(CCG)n	Simple_repeat	1	62	(0)	665097
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
16	0.0	0.0	0.0	chr11	64230095	64230111	(70856511)	+	(A)n	Simple_repeat	1	17	(0)	665226
11	22.0	2.2	4.3	chr11	64234313	64234358	(70852264)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	665231
17	13.1	0.0	8.2	chr11	64234457	64234505	(70852117)	+	(GCCCC)n	Simple_repeat	1	49	(0)	665232
2048	10.9	2.7	0.0	chr11	64242795	64243079	(70843543)	+	AluSx1	SINE/Alu	2	294	(18)	665246
19	24.7	3.7	3.5	chr11	64305585	64305666	(70780956)	+	(CGG)n	Simple_repeat	1	85	(0)	665354
24	23.6	3.1	4.0	chr11	64305743	64305838	(70780784)	+	G-rich	Low_complexity	1	99	(0)	665355
375	33.9	5.3	1.6	chr11	64354414	64354596	(70732026)	C	MIR3	SINE/MIR	(15)	193	4	665457
12	16.4	5.9	0.0	chr11	64355142	64355175	(70731447)	+	(CCTCC)n	Simple_repeat	1	36	(0)	665458
15	20.6	0.0	5.9	chr11	64409769	64409819	(70676803)	+	(CCTCTCC)n	Simple_repeat	1	51	(0)	665567
456	31.3	2.9	0.0	chr11	64410271	64410436	(70676186)	+	MamGypsy2-I	LTR/Gypsy	2906	3076	(1090)	665568
16	21.6	4.2	0.0	chr11	64609127	64609174	(70477448)	+	GA-rich	Low_complexity	1	50	(0)	665943
12	31.3	0.0	0.0	chr11	64609220	64609266	(70477356)	+	(TCCCCC)n	Simple_repeat	1	47	(0)	665944
2069	10.9	2.0	4.2	chr11	65419661	65419973	(69666649)	+	AluSz	SINE/Alu	1	306	(6)	667509
5046	21.8	8.6	5.3	chr11	65769281	65770214	(69316408)	C	L1MC4	LINE/L1	(4775)	1440	443	668130
2314	9.7	0.3	0.0	chr11	65770215	65770503	(69316119)	C	AluSx	SINE/Alu	(22)	290	1	668149
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
12	21.1	0.0	7.8	chr11	65959984	65960034	(69126588)	+	(GGTGGA)n	Simple_repeat	1	51	(0)	668544
191	37.7	1.8	7.7	chr11	65960195	65960375	(69126247)	C	L2c	LINE/L2	(36)	3351	3182	668545
319	24.7	2.3	1.2	chr11	66363907	66363992	(68722630)	C	MIR3	SINE/MIR	(15)	193	107	669324
13	16.2	0.0	5.3	chr11	66371654	66371691	(68714931)	+	G-rich	Low_complexity	1	38	(0)	669343
233	26.9	8.1	6.6	chr11	66372297	66372448	(68714174)	C	ORSL-2b	DNA/hAT-Tip100	(107)	401	246	669344
1896	8.1	0.0	13.2	chr11	66372449	66372781	(68713841)	C	AluSx	SINE/Alu	(23)	289	1	669345
35	24.7	2.6	5.1	chr11	66744642	66744682	(68341940)	+	(GGCGCG)n	Simple_repeat	1	64	(92)	670144
18	22.6	0.0	3.6	chr11	66744683	66744737	(68341885)	+	(GCGG)n	Simple_repeat	1	55	(0)	670145
35	24.7	2.6	5.1	chr11	66744738	66744793	(68341829)	+	(GGCGCG)n	Simple_repeat	65	156	(0)	670144
28	0.0	0.0	0.0	chr11	66744820	66744845	(68341777)	+	(GGC)n	Simple_repeat	1	26	(0)	670146
14	20.1	0.0	0.0	chr11	66745297	66745330	(68341292)	+	(GGCGG)n	Simple_repeat	1	34	(0)	670147
16	31.1	1.4	1.4	chr11	67118966	67119034	(67967588)	+	G-rich	Low_complexity	1	70	(0)	671004
18	4.2	0.0	0.0	chr11	67119342	67119366	(67967256)	+	(CGG)n	Simple_repeat	1	25	(0)	671005
284	27.4	17.1	1.9	chr11	67317104	67317207	(67769415)	C	MIR3	SINE/MIR	(56)	152	30	671397
12	15.3	5.3	2.5	chr11	67443426	67443463	(67643159)	+	(GGCTCC)n	Simple_repeat	1	40	(0)	671645
26	21.5	3.5	5.9	chr11	67443509	67443622	(67643000)	+	G-rich	Low_complexity	1	118	(0)	671646
2357	11.0	0.3	0.0	chr11	67526162	67526471	(67560151)	+	AluSz6	SINE/Alu	1	311	(1)	671801
465	29.5	7.8	1.6	chr11	67526771	67526952	(67559670)	+	MIRb	SINE/MIR	43	241	(27)	671802
4319	10.2	1.7	2.1	chr11	67698550	67699573	(67387049)	+	MER11A	LTR/ERVK	1	1266	(0)	672119
11800	8.2	0.7	1.9	chr11	67699574	67701236	(67385386)	+	HERVK11-int	LTR/ERVK	1	1642	(6311)	672119
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
623	19.3	8.0	1.3	chr11	68461986	68462137	(66624485)	+	MIR	SINE/MIR	70	232	(30)	673470
2183	26.4	20.1	2.4	chr11	68471311	68472198	(66614424)	C	L2a	LINE/L2	(1080)	2339	1174	673486
19	15.4	0.0	4.3	chr11	69641016	69641062	(65445560)	+	(CCCCCT)n	Simple_repeat	1	47	(0)	675426
18	17.4	6.7	1.6	chr11	70270768	70270827	(64815795)	+	G-rich	Low_complexity	1	64	(0)	676599
280	13.9	2.8	6.1	chr11	71149731	71150436	(63936186)	+	GA-rich	Low_complexity	1	726	(0)	677785
6143	6.2	3.0	0.3	chr11	72153927	72154685	(62931937)	+	LTR17	LTR/ERV1	1	780	(0)	679446
1795	11.0	9.4	0.9	chr11	72573078	72573398	(62513224)	+	Tigger4b	DNA/TcMar-Tigger	11	361	(0)	680214
15	24.6	2.1	0.0	chr11	72573436	72573483	(62513139)	+	(CCCAC)n	Simple_repeat	1	49	(0)	680215
24	11.7	0.0	0.0	chr11	72573601	72573637	(62512985)	+	(AC)n	Simple_repeat	1	37	(0)	680216
12	15.9	5.7	0.0	chr11	72752365	72752399	(62334223)	+	(ACCGCC)n	Simple_repeat	1	37	(0)	680518
16	18.0	0.0	2.5	chr11	72752465	72752504	(62334118)	+	G-rich	Low_complexity	1	40	(0)	680519
14	18.8	0.0	2.6	chr11	72781604	72781641	(62304981)	+	G-rich	Low_complexity	1	38	(0)	680576
15	25.2	3.5	1.7	chr11	72781670	72781753	(62304869)	+	(CCG)n	Simple_repeat	1	85	(0)	680577
18	10.7	2.2	6.4	chr11	72781772	72781825	(62304797)	+	(CCGCC)n	Simple_repeat	1	51	(0)	680578
16	22.0	0.0	3.9	chr11	72781912	72781962	(62304660)	+	(GCCCC)n	Simple_repeat	1	51	(0)	680579
17	8.2	0.0	0.0	chr11	73597946	73597971	(61488651)	+	(CGG)n	Simple_repeat	1	26	(0)	682197
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
20	7.2	0.0	0.0	chr11	73761139	73761168	(61325454)	+	(GCGT)n	Simple_repeat	1	30	(0)	682608
17	24.0	3.3	1.6	chr11	73761468	73761528	(61325094)	+	G-rich	Low_complexity	1	63	(0)	682609
317	17.1	0.0	0.7	chr11	73761750	73761816	(61324806)	C	MIRc	SINE/MIR	(65)	165	99	682610
2668	5.2	0.0	0.0	chr11	73761832	73762140	(61324482)	+	AluSc	SINE/Alu	1	309	(0)	682611
30	14.6	0.9	11.3	chr11	74311663	74311776	(60774846)	+	(CCGCC)n	Simple_repeat	1	115	(0)	683818
17	17.8	4.4	0.0	chr11	75433220	75433265	(59653357)	+	GA-rich	Low_complexity	1	48	(0)	686045
12	20.4	4.1	3.9	chr11	75524854	75524902	(59561720)	+	(CTCTCCC)n	Simple_repeat	1	51	(0)	686261
354	33.8	6.8	5.0	chr11	75524914	75525072	(59561550)	+	MIRb	SINE/MIR	104	265	(3)	686262
291	32.1	0.9	0.7	chr11	75554191	75554319	(59532303)	C	MIRc	SINE/MIR	(116)	152	23	686331
17	22.6	0.0	0.0	chr11	75554430	75554465	(59532157)	+	(CA)n	Simple_repeat	1	36	(0)	686332
18	19.6	1.7	5.1	chr11	75706476	75706533	(59380089)	+	(CCT)n	Simple_repeat	1	59	(0)	686604
336	33.5	14.8	0.0	chr11	75706665	75706831	(59379791)	+	MIRb	SINE/MIR	3	198	(70)	686605
17	19.8	3.2	4.6	chr11	76380840	76380902	(58705720)	+	(CGCC)n	Simple_repeat	1	65	(0)	687898
16	27.2	1.5	3.0	chr11	76380912	76380976	(58705646)	+	G-rich	Low_complexity	1	66	(0)	687899
14	30.3	0.0	1.9	chr11	76381067	76381120	(58705502)	+	(CCG)n	Simple_repeat	1	54	(0)	687900
4667	9.8	2.3	1.8	chr11	76815386	76816406	(58270216)	C	MER11A	LTR/ERVK	(0)	1266	1	688732
2920	11.8	1.6	0.7	chr11	77053578	77054012	(58032610)	C	MER83	LTR/ERV1	(9)	439	1	689175
3365	13.4	0.6	2.9	chr11	77054013	77054363	(58032259)	+	MER41B	LTR/ERV1	124	469	(165)	689174
398	23.4	7.9	5.3	chr11	77309966	77310174	(57776448)	+	MER34B	LTR/ERV1	298	511	(76)	689605
26	2.8	5.4	0.0	chr11	77310175	77310211	(57776411)	+	(GTTTT)n	Simple_repeat	1	39	(0)	689606
2259	9.8	0.3	0.0	chr11	77310213	77310497	(57776125)	C	AluSp	SINE/Alu	(27)	286	1	689607
13	8.9	0.0	3.9	chr11	77473569	77473594	(57613028)	+	(CTC)n	Simple_repeat	1	26	(0)	689965
19	23.4	6.7	2.1	chr11	77473720	77473808	(57612814)	+	G-rich	Low_complexity	1	95	(0)	689966
35	9.4	0.0	8.5	chr11	77474131	77474212	(57612410)	+	(CCCCTC)n	Simple_repeat	1	82	(0)	689967
15	13.7	3.1	0.0	chr11	77474212	77474243	(57612379)	+	(CGG)n	Simple_repeat	1	33	(0)	689968
16	24.7	3.8	0.0	chr11	77819417	77819469	(57267153)	+	(GCA)n	Simple_repeat	1	55	(0)	690657
12	18.1	4.2	1.3	chr11	77820097	77820135	(57266487)	+	GA-rich	Low_complexity	1	40	(0)	690658
205	30.5	7.9	0.0	chr11	78188432	78188513	(56898109)	C	MIRc	SINE/MIR	(106)	162	74	691567
12	23.5	0.0	0.0	chr11	78417107	78417141	(56669481)	+	(TGACGC)n	Simple_repeat	1	35	(0)	691988
26	25.5	2.4	5.5	chr11	78417750	78417873	(56668749)	+	(GCGCGG)n	Simple_repeat	1	127	(0)	691989
445	31.9	1.6	0.0	chr11	78770301	78770419	(56316203)	C	MIR3	SINE/MIR	(55)	153	33	692630
4822	24.9	13.0	2.7	chr11	82889997	82891728	(52194894)	+	L2a	LINE/L2	1146	3081	(338)	699652
189	31.4	4.1	1.4	chr11	85648194	85648264	(49438358)	C	L3	LINE/CR1	(3833)	266	194	704148
224	31.0	10.5	6.5	chr11	85648284	85648438	(49438184)	+	MIRc	SINE/MIR	44	205	(63)	704149
19	19.7	0.0	2.1	chr11	86955542	86955589	(48131033)	+	(CCCT)n	Simple_repeat	1	48	(0)	706368
18	25.2	2.9	2.8	chr11	86955590	86955611	(48131011)	+	(CCCG)n	Simple_repeat	3	72	(0)	706369
317	18.2	25.2	0.0	chr11	86955863	86955972	(48130650)	+	MIRb	SINE/MIR	87	233	(35)	706370
3116	12.5	1.4	4.4	chr11	87131764	87132258	(47954364)	+	MER1A	DNA/hAT-Charlie	30	509	(20)	706694
295	22.3	5.0	6.0	chr11	87132264	87132363	(47954259)	+	MIR	SINE/MIR	164	262	(0)	706693
315	28.0	9.1	3.7	chr11	92224276	92224450	(42862172)	+	MIRc	SINE/MIR	37	222	(46)	713863
14	22.6	3.8	1.8	chr11	92224914	92224966	(42861656)	+	(CCTCT)n	Simple_repeat	1	55	(0)	713864
16	0.0	0.0	0.0	chr11	92224981	92225000	(42861622)	+	(CGG)n	Simple_repeat	1	20	(0)	713865
535	33.3	5.3	6.1	chr11	93279151	93279396	(41807226)	C	L2c	LINE/L2	(97)	3290	3047	715369
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
15	14.3	3.0	2.9	chr11	94768892	94768924	(40317698)	+	(GC)n	Simple_repeat	1	34	(0)	717652
19	12.2	2.7	0.0	chr11	96389853	96389889	(38696733)	+	(CGCCTC)n	Simple_repeat	1	38	(0)	720073
39856	12.7	1.3	0.8	chr11	96500352	96506568	(38580054)	+	LTR46-int	LTR/ERV1	658	8177	(449)	720202
17	30.6	6.6	2.8	chr11	99819205	99819345	(35267277)	+	(TTCCT)n	Simple_repeat	1	146	(0)	724287
2158	14.3	0.0	0.9	chr11	101353976	101354290	(33732332)	+	AluSz6	SINE/Alu	1	312	(0)	726285
20	8.9	5.7	5.4	chr11	107858872	107858924	(27227698)	+	(CGCT)n	Simple_repeat	1	56	(0)	735683
20	13.7	1.9	5.5	chr11	107928336	107928409	(27158213)	+	(CCCCCG)n	Simple_repeat	1	71	(0)	735863
1844	11.0	0.5	0.4	chr11	108286342	108286766	(26799856)	C	MER51A	LTR/ERV1	(47)	587	1	736564
620	36.7	7.0	2.4	chr11	108286767	108287300	(26799322)	C	L4_C_Mam	LINE/RTE-X	(3459)	1679	1120	736562
12	30.6	0.0	4.6	chr11	109423708	109423772	(25662850)	+	(CAGCGG)n	Simple_repeat	1	65	(0)	738334
13	15.8	0.0	7.3	chr11	110093511	110093551	(24993071)	+	G-rich	Low_complexity	1	41	(0)	739266
12	22.7	0.0	2.6	chr11	111602442	111602479	(23484143)	+	G-rich	Low_complexity	1	38	(0)	741647
14	23.3	0.0	2.4	chr11	111602500	111602541	(23484081)	+	(CCGC)n	Simple_repeat	1	42	(0)	741648
203	24.1	9.8	5.7	chr11	112226856	112226943	(22859679)	+	MIRb	SINE/MIR	169	260	(8)	742778
1961	16.7	0.3	0.7	chr11	112453987	112454273	(22632349)	+	AluJo	SINE/Alu	1	286	(26)	743149
237	29.0	13.4	4.4	chr11	112523247	112523517	(22563105)	+	L3	LINE/CR1	3668	3966	(133)	743259
30	12.9	0.0	0.0	chr11	114059445	114059495	(21027127)	+	(GGGGA)n	Simple_repeat	1	51	(0)	745688
528	30.3	5.3	7.7	chr11	114182350	114182532	(20904090)	+	L2a	LINE/L2	3210	3366	(21)	745857
748	30.0	5.7	3.6	chr11	115007877	115008153	(20078469)	+	L2a	LINE/L2	3144	3426	(0)	747046
221	32.3	10.6	0.0	chr11	115008282	115008390	(20078232)	C	MIRc	SINE/MIR	(127)	141	16	747048
2572	16.8	4.3	0.2	chr11	115020669	115021140	(20065482)	+	L1MB3	LINE/L1	30	521	(5863)	747068
1291	19.5	9.6	0.4	chr11	115021219	115021349	(20065273)	C	AluSz	SINE/Alu	(39)	273	134	747069
27	0.0	3.3	0.0	chr11	115021350	115021379	(20065243)	+	(TTTTG)n	Simple_repeat	1	31	(0)	747070
1291	19.5	9.6	0.4	chr11	115021380	115021493	(20065129)	C	AluSz	SINE/Alu	(186)	126	3	747069
33	3.1	0.0	0.0	chr11	115589957	115589989	(19496633)	+	(GT)n	Simple_repeat	1	33	(0)	747887
248	31.4	8.9	2.9	chr11	115599177	115599281	(19487341)	C	L2c	LINE/L2	(236)	3151	3040	747910
36	10.7	0.0	8.2	chr11	115599380	115599464	(19487158)	+	(CCCTT)n	Simple_repeat	1	85	(0)	747911
163	5.2	3.5	0.8	chr11	115599466	115599692	(19486930)	+	(TCTT)n	Simple_repeat	1	235	(0)	747912
23	11.1	0.0	0.0	chr11	117144738	117144776	(17941846)	+	(GCCCT)n	Simple_repeat	1	39	(0)	750609
12	13.6	2.8	5.4	chr11	117179036	117179071	(17907551)	+	(CCCT)n	Simple_repeat	1	37	(0)	750694
21	16.4	2.3	0.0	chr11	117179216	117179258	(17907364)	+	(CGC)n	Simple_repeat	1	44	(0)	750695
18	27.5	4.0	0.0	chr11	117232133	117232206	(17854416)	+	(GCCCGGC)n	Simple_repeat	1	77	(0)	750765
12	24.9	2.0	3.9	chr11	117232535	117232585	(17854037)	+	(CGG)n	Simple_repeat	1	52	(0)	750766
24	28.1	3.3	2.8	chr11	117232758	117232873	(17853749)	+	G-rich	Low_complexity	1	116	(0)	750767
15	11.3	4.1	3.9	chr11	118152814	118152857	(16933765)	+	G-rich	Low_complexity	1	44	(0)	752413
19	26.2	2.1	5.2	chr11	118152876	118152946	(16933676)	+	(GGAGCA)n	Simple_repeat	1	96	(0)	752414
19	18.3	1.9	3.7	chr11	118152901	118152953	(16933669)	+	GA-rich	Low_complexity	1	54	(0)	752415
12	0.0	4.3	4.2	chr11	118152947	118152969	(16933653)	+	(GAGC)n	Simple_repeat	1	24	(0)	752416
261	27.3	17.0	0.8	chr11	118171863	118171995	(16914627)	C	MIR3	SINE/MIR	(20)	188	30	752439
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
16	21.8	3.6	1.8	chr11	118790981	118791035	(16295587)	+	(CCCGCC)n	Simple_repeat	1	57	(0)	753566
17	19.5	5.1	6.0	chr11	118791133	118791211	(16295411)	+	(TCGC)n	Simple_repeat	1	83	(0)	753567
17	12.7	2.6	5.1	chr11	118909876	118909913	(16176709)	+	(CA)n	Simple_repeat	1	39	(0)	753851
12	21.0	5.9	1.9	chr11	118910433	118910483	(16176139)	+	(CCAGCC)n	Simple_repeat	1	54	(0)	753852
14	17.6	0.0	6.7	chr11	118929552	118929596	(16157026)	+	(TCCCCC)n	Simple_repeat	1	45	(0)	753878
493	25.6	1.8	3.7	chr11	119168503	119168673	(15917949)	+	MIRc	SINE/MIR	9	186	(82)	754376
13	17.4	4.9	2.3	chr11	119168735	119168775	(15917847)	+	G-rich	Low_complexity	1	43	(0)	754377
18	6.7	0.0	5.7	chr11	119205984	119206018	(15880604)	+	(CCGCC)n	Simple_repeat	1	35	(0)	754441
37	0.0	0.0	0.0	chr11	119206290	119206323	(15880299)	+	(CGG)n	Simple_repeat	1	34	(0)	754442
19	12.8	0.0	0.0	chr11	119206523	119206556	(15880066)	+	(CAC)n	Simple_repeat	1	34	(0)	754443
2101	10.7	5.5	0.0	chr11	119441567	119441857	(15644765)	+	AluSz	SINE/Alu	1	308	(4)	754883
2406	14.6	3.8	0.7	chr11	119441858	119442205	(15644417)	C	MSTB	LTR/ERVL-MaLR	(67)	359	1	754882
14	25.2	3.5	1.7	chr11	119729178	119729235	(15357387)	+	(CGCTCT)n	Simple_repeat	1	60	(0)	755357
290	25.0	11.8	1.3	chr11	119729597	119729745	(15356877)	C	MIR3	SINE/MIR	(24)	184	30	755358
1123	15.9	2.4	5.0	chr11	120306411	120306628	(14779994)	C	MER20	DNA/hAT-Charlie	(2)	217	6	756324
234	27.9	10.3	4.7	chr11	120306875	120307002	(14779620)	C	L3	LINE/CR1	(12)	4087	3952	756325
2149	11.2	0.0	3.0	chr11	120549102	120549405	(14537217)	C	AluSg	SINE/Alu	(15)	295	1	756748
200	27.7	0.0	0.0	chr11	120549816	120549862	(14536760)	C	MER91A	DNA/hAT-Tip100	(3)	193	147	756749
297	14.6	0.0	1.8	chr11	120549924	120549979	(14536643)	+	MLT1L	LTR/ERVL-MaLR	532	586	(24)	756750
18	9.2	5.7	0.0	chr11	120953031	120953065	(14133557)	+	(GGA)n	Simple_repeat	1	37	(0)	757450
589	25.5	1.8	3.6	chr11	121023690	121023856	(14062766)	C	MIR3	SINE/MIR	(37)	171	8	757567
11	17.3	7.7	0.0	chr11	121024161	121024199	(14062423)	+	G-rich	Low_complexity	1	42	(0)	757568
30	0.0	0.0	0.0	chr11	121024525	121024553	(14062069)	+	(TGGGC)n	Simple_repeat	1	29	(0)	757569
379	31.4	10.6	1.7	chr11	121161201	121161387	(13925235)	C	MIR3	SINE/MIR	(8)	200	1	757718
35	2.1	6.2	0.0	chr11	121161529	121161576	(13925046)	+	(CCTTC)n	Simple_repeat	1	51	(0)	757719
477	22.1	8.3	2.1	chr11	121291982	121292180	(13794442)	+	LTR54	LTR/ERV1	221	455	(43)	757881
17	14.9	2.7	0.0	chr11	121427324	121427360	(13659262)	+	(CCCGG)n	Simple_repeat	1	38	(0)	758099
184	29.6	11.7	3.6	chr11	121427459	121427623	(13658999)	+	L2b	LINE/L2	3190	3369	(57)	758093
14	12.0	0.0	3.5	chr11	122655915	122655943	(12430679)	+	(CGC)n	Simple_repeat	1	29	(0)	759975
308	40.2	1.9	0.7	chr11	122746717	122746854	(12339768)	C	L2c	LINE/L2	(4)	3383	3233	760172
276	32.7	13.9	3.4	chr11	122746888	122747262	(12339360)	C	L2c	LINE/L2	(219)	3156	2737	760172
49	15.5	1.0	2.9	chr11	123316774	123316905	(11769717)	+	G-rich	Low_complexity	1	129	(0)	761309
4754	12.2	1.7	6.0	chr11	124069453	124070271	(11016351)	C	LTR1	LTR/ERV1	(0)	783	1	762508
14	12.0	0.0	3.5	chr11	124800082	124800128	(10286494)	+	(CGG)n	Simple_repeat	1	45	(0)	763574
12	25.6	0.0	0.0	chr11	124876298	124876334	(10210288)	+	G-rich	Low_complexity	1	37	(0)	763704
1941	13.2	0.0	0.0	chr11	125568869	125569134	(9517488)	C	AluSg	SINE/Alu	(26)	284	19	764749
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
3680	11.6	4.1	0.6	chr11	125685330	125685868	(9400754)	+	LTR6A	LTR/ERV1	6	564	(0)	764970
277	35.3	5.6	9.1	chr11	126440638	126440955	(8645667)	C	L2c	LINE/L2	(0)	3387	3082	766096
17	13.4	4.7	2.2	chr11	128692412	128692420	(6394202)	+	(CACCCC)n	Simple_repeat	1	20	(35)	769250
14	3.9	0.0	9.4	chr11	128692421	128692452	(6394170)	+	(CCCCA)n	Simple_repeat	1	32	(0)	769251
17	13.4	4.7	2.2	chr11	128692453	128692465	(6394157)	+	(CACCCC)n	Simple_repeat	21	55	(0)	769250
12	10.3	6.1	2.9	chr11	128692575	128692607	(6394015)	+	G-rich	Low_complexity	1	35	(0)	769252
22175	13.1	3.2	0.8	chr11	129003096	129008317	(6078305)	C	L1MA2	LINE/L1	(2202)	5363	11	769699
19	26.3	3.3	0.8	chr11	129278901	129278995	(5807627)	+	G-rich	Low_complexity	1	97	(0)	770083
19	20.3	0.0	2.1	chr11	129815779	129815826	(5270796)	+	(GCGGA)n	Simple_repeat	1	48	(0)	770829
12	23.3	5.1	6.0	chr11	129816017	129816095	(5270527)	+	G-rich	Low_complexity	1	83	(0)	770830
21	21.2	1.8	1.7	chr11	130314431	130314494	(4772128)	+	(GGC)n	Simple_repeat	1	64	(0)	771693
23	15.4	2.5	4.9	chr11	130314765	130314825	(4771797)	+	G-rich	Low_complexity	1	59	(0)	771694
19	14.1	0.0	4.7	chr11	130314827	130314869	(4771753)	+	(GCC)n	Simple_repeat	1	43	(0)	771695
16	8.9	0.0	9.3	chr11	130314958	130315000	(4771622)	+	G-rich	Low_complexity	1	43	(0)	771696
420	30.2	3.0	2.5	chr11	131679376	131679538	(3407084)	+	MER117	DNA/hAT-Charlie	16	179	(18)	773649
11	13.2	5.7	2.7	chr11	133082160	133082194	(2004428)	+	(GGCCTC)n	Simple_repeat	1	37	(0)	775451
80	22.5	3.2	4.4	chr11	133082354	133082637	(2003985)	+	(CCCCCT)n	Simple_repeat	1	293	(0)	775452
60	29.1	3.0	3.6	chr11	133947746	133948042	(1138580)	+	(TCTG)n	Simple_repeat	1	306	(0)	776555
49	4.0	0.0	0.0	chr11	133948050	133948100	(1138522)	+	(TG)n	Simple_repeat	1	51	(0)	776556
17	21.8	1.5	6.0	chr11	133948162	133948230	(1138392)	+	(TCTG)n	Simple_repeat	1	65	(0)	776557
1837	13.4	0.4	1.8	chr11	134050260	134050536	(1036086)	+	AluJb	SINE/Alu	21	293	(19)	776715
313	34.1	2.8	0.0	chr12	156224	156361	(133118948)	C	MIR3	SINE/MIR	(15)	193	52	778315
6576	5.8	13.3	7.0	chr12	235374	236465	(133038844)	+	MER11A	LTR/ERVK	1	1266	(0)	778419
219	12.5	14.9	0.0	chr12	236543	236582	(133038727)	+	L2a	LINE/L2	3380	3426	(0)	778420
189	34.7	5.8	3.0	chr12	236592	236692	(133038617)	C	L2c	LINE/L2	(3)	3384	3281	778421
284	29.4	4.5	0.0	chr12	643521	643605	(132631704)	C	MIRb	SINE/MIR	(72)	196	108	779138
1919	13.1	1.7	1.7	chr12	952610	952900	(132322409)	+	AluSq2	SINE/Alu	1	291	(22)	779764
50	17.4	4.8	1.5	chr12	952901	953025	(132322284)	+	G-rich	Low_complexity	1	131	(0)	779765
2132	11.3	2.3	0.0	chr12	953031	953331	(132321978)	+	AluSz	SINE/Alu	3	310	(2)	779766
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
45	25.6	3.8	4.5	chr12	991143	991354	(132283955)	+	(CGG)n	Simple_repeat	1	220	(0)	779868
16	17.7	1.7	6.8	chr12	991627	991684	(132283625)	+	G-rich	Low_complexity	1	59	(0)	779869
549	28.9	16.4	4.0	chr12	1195421	1195857	(132079452)	+	MLT1L	LTR/ERVL-MaLR	119	610	(0)	780274
15	9.1	8.6	0.0	chr12	1480725	1480759	(131794550)	+	(GGTAGTG)n	Simple_repeat	1	38	(0)	780734
1182	18.8	10.8	3.7	chr12	1480927	1481225	(131794084)	C	MER44A	DNA/TcMar-Tigger	(8)	331	9	780735
17	17.9	2.7	7.9	chr12	1594790	1594863	(131680446)	+	(GCGCCC)n	Simple_repeat	1	76	(0)	780921
37	14.4	2.6	1.2	chr12	1661850	1661927	(131613382)	+	G-rich	Low_complexity	1	80	(0)	781039
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
17	15.7	0.0	2.6	chr12	1691119	1691157	(131584152)	+	(CCCCCTC)n	Simple_repeat	1	39	(0)	781101
243	29.6	2.0	1.6	chr12	1698983	1699090	(131576219)	+	MER102c	DNA/hAT-Charlie	233	341	(0)	781119
235	28.7	5.4	6.5	chr12	1699115	1699207	(131576102)	+	L2c	LINE/L2	3278	3369	(18)	781120
273	30.6	7.9	2.5	chr12	2065169	2065372	(131209937)	C	UCON28a	Unknown	(367)	440	225	781639
251	18.0	12.9	1.6	chr12	2162040	2162101	(131113208)	+	MIRb	SINE/MIR	121	190	(78)	781785
2476	7.3	0.0	0.0	chr12	2992017	2992317	(130282992)	C	AluSx1	SINE/Alu	(10)	302	2	783096
1599	17.2	7.6	0.0	chr12	3612686	3612847	(129662462)	C	AluJr4	SINE/Alu	(22)	290	120	784116
58	0.0	0.0	0.0	chr12	3612848	3612899	(129662410)	+	(TATT)n	Simple_repeat	1	52	(0)	784117
1599	17.2	7.6	0.0	chr12	3612900	3613005	(129662304)	C	AluJr4	SINE/Alu	(193)	119	1	784116
12	16.4	5.9	0.0	chr12	3873171	3873204	(129402105)	+	(CCCCG)n	Simple_repeat	1	36	(0)	784521
15	10.8	3.3	0.0	chr12	4031250	4031279	(129244030)	+	(CCGC)n	Simple_repeat	1	31	(0)	784812
12	29.7	0.0	2.1	chr12	4031354	4031401	(129243908)	+	(GCGCT)n	Simple_repeat	1	48	(0)	784813
12	15.7	6.5	4.1	chr12	4031390	4031435	(129243874)	+	(GCGCC)n	Simple_repeat	1	49	(0)	784814
19	13.8	6.0	1.9	chr12	4269331	4269380	(129005929)	+	(CCG)n	Simple_repeat	1	53	(0)	785266
1710	18.1	0.3	1.7	chr12	5902303	5902595	(127372714)	+	AluJr4	SINE/Alu	1	289	(23)	787700
225	8.3	0.3	0.0	chr12	5902596	5902905	(127372404)	+	(GGGGA)n	Simple_repeat	1	311	(0)	787701
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
21	22.5	1.7	1.6	chr12	6612945	6613004	(126662305)	+	(CCCT)n	Simple_repeat	1	61	(0)	789028
11	17.4	0.0	5.6	chr12	6613660	6613695	(126661614)	+	(CCCACT)n	Simple_repeat	1	36	(0)	789029
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
14	13.2	4.3	6.1	chr12	6689168	6689214	(126586095)	+	GA-rich	Low_complexity	1	49	(0)	789181
15	22.0	2.0	3.9	chr12	6766353	6766403	(126508906)	+	(CGG)n	Simple_repeat	1	52	(0)	789350
34	19.1	1.3	1.2	chr12	6821734	6821812	(126453497)	+	G-rich	Low_complexity	1	80	(0)	789474
15	33.6	2.5	1.2	chr12	6822131	6822211	(126453098)	+	(TCTC)n	Simple_repeat	1	83	(0)	789475
13	16.3	0.0	5.3	chr12	6852108	6852145	(126423164)	+	GA-rich	Low_complexity	1	38	(0)	789515
12	22.6	1.9	5.7	chr12	8032653	8032704	(125242605)	+	GA-rich	Low_complexity	1	53	(0)	791667
19	7.8	0.0	10.0	chr12	8032704	8032753	(125242556)	+	(GAGCC)n	Simple_repeat	1	50	(0)	791668
4207	17.7	4.8	5.9	chr12	8141232	8142314	(125132995)	+	MER11C	LTR/ERVK	1	1070	(1)	791860
2147	12.6	2.9	0.0	chr12	8665002	8665303	(124610006)	C	AluSx1	SINE/Alu	(1)	311	1	792671
1194	18.0	3.1	0.5	chr12	8761068	8761256	(124514053)	+	AluJb	SINE/Alu	1	194	(118)	792881
18	4.8	0.0	0.0	chr12	8761273	8761294	(124514015)	+	(A)n	Simple_repeat	1	22	(0)	792882
2238	10.5	0.0	1.5	chr12	8761414	8761742	(124513567)	C	LTR17	LTR/ERV1	(456)	324	1	792883
734	23.7	14.9	4.3	chr12	8890931	8891278	(124384031)	C	MER110A	LTR/ERV1	(7)	484	119	793085
15	20.3	2.1	2.1	chr12	8914162	8914208	(124361101)	+	(TCTCCCG)n	Simple_repeat	1	48	(0)	793138
15	31.4	0.0	0.0	chr12	8914413	8914467	(124360842)	+	G-rich	Low_complexity	1	55	(0)	793139
424	23.7	18.7	0.5	chr12	9064134	9064279	(124211030)	+	MIR	SINE/MIR	3	174	(94)	793383
1537	20.4	7.8	0.9	chr12	9064280	9064729	(124210580)	+	MER52D	LTR/ERV1	5	488	(1635)	793384
18	8.5	0.0	0.0	chr12	9065149	9065173	(124210136)	+	(C)n	Simple_repeat	1	25	(0)	793385
272	32.2	6.0	3.7	chr12	9403922	9404251	(123871058)	C	SATR1	Satellite	(113)	337	1	793805
270	32.8	1.5	3.0	chr12	9406458	9406658	(123868651)	C	SATR1	Satellite	(84)	339	142	793807
305	24.2	12.6	7.0	chr12	9570115	9570256	(123705053)	+	L1MDa	LINE/L1	522	672	(5961)	794041
830	24.3	1.6	0.5	chr12	9782615	9782800	(123492509)	+	LOR1-int	LTR/ERV1	1844	2031	(4300)	794313
3991	12.6	3.5	0.8	chr12	9782804	9783425	(123491884)	C	LTR9B	LTR/ERV1	(0)	644	6	794314
16	18.9	0.0	0.0	chr12	10213222	10213257	(123062052)	+	G-rich	Low_complexity	1	36	(0)	794932
15	9.4	9.6	5.3	chr12	12266562	12266613	(121008696)	+	(CCT)n	Simple_repeat	1	57	(0)	797793
508	23.8	0.8	0.8	chr12	12350540	12350666	(120924643)	C	L1ME4b	LINE/L1	(22)	870	744	798004
12	12.3	5.1	4.9	chr12	12562720	12562758	(120712551)	+	G-rich	Low_complexity	1	41	(0)	798343
23	11.5	0.0	0.0	chr12	12562926	12562963	(120712346)	+	(CCT)n	Simple_repeat	1	38	(0)	798344
13	20.4	0.0	7.7	chr12	12562962	12563013	(120712296)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	798345
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
15	24.0	3.2	3.1	chr12	12612098	12612159	(120663150)	+	G-rich	Low_complexity	1	64	(0)	798444
13	8.1	3.9	0.0	chr12	12717774	12717799	(120557510)	+	(TTTGT)n	Simple_repeat	1	27	(0)	798630
15	13.1	0.0	5.4	chr12	12724911	12724947	(120550362)	+	G-rich	Low_complexity	1	37	(0)	798633
11	24.1	0.0	0.0	chr12	12725318	12725351	(120549958)	+	(CGCCCC)n	Simple_repeat	1	34	(0)	798634
24	24.3	0.0	0.0	chr12	12725359	12725409	(120549900)	+	(TG)n	Simple_repeat	1	51	(0)	798635
11	21.7	7.3	1.7	chr12	12725648	12725702	(120549607)	+	(CCTCGCG)n	Simple_repeat	1	59	(0)	798636
22	19.7	0.0	0.0	chr12	12726157	12726198	(120549111)	+	A-rich	Low_complexity	1	42	(0)	798637
16	0.0	0.0	0.0	chr12	12891840	12891856	(120383453)	+	(T)n	Simple_repeat	1	17	(0)	799008
13	20.2	4.3	2.0	chr12	12892048	12892094	(120383215)	+	G-rich	Low_complexity	1	49	(0)	799009
406	23.5	5.3	8.5	chr12	13044887	13045063	(120230246)	C	MIRc	SINE/MIR	(81)	187	17	799301
7155	6.7	17.5	0.6	chr12	13053366	13054416	(120220893)	C	MER11A	LTR/ERVK	(0)	1266	1	799318
13	25.0	3.2	4.6	chr12	13255927	13256018	(120019291)	+	GA-rich	Low_complexity	1	90	(0)	799597
507	28.7	10.1	3.8	chr12	13256147	13256490	(120018819)	+	LTR88b	LTR/Gypsy?	35	402	(435)	799598
19	33.2	3.1	2.0	chr12	13980895	13980992	(119294317)	+	(CG)n	Simple_repeat	1	101	(0)	800595
1620	32.0	2.1	4.9	chr12	14520488	14521186	(118754123)	+	L1MA6	LINE/L1	4	682	(6486)	801489
738	19.0	9.2	0.6	chr12	15706172	15706340	(117568969)	+	MER61A	LTR/ERV1	1	185	(156)	803162
266	33.3	13.6	1.2	chr12	15706342	15706514	(117568795)	+	L2c	LINE/L2	3012	3209	(178)	803163
16	10.4	0.0	5.7	chr12	15882461	15882495	(117392814)	+	(CCCT)n	Simple_repeat	1	35	(0)	803443
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
28	0.0	0.0	0.0	chr12	19129442	19129468	(114145841)	+	(T)n	Simple_repeat	1	27	(0)	807582
15	22.4	6.4	0.0	chr12	19129671	19129717	(114145592)	+	(GC)n	Simple_repeat	1	50	(0)	807583
19	14.3	4.2	2.0	chr12	19129701	19129748	(114145561)	+	(GCTC)n	Simple_repeat	1	50	(0)	807584
18	17.2	0.0	2.4	chr12	19129747	19129787	(114145522)	+	(CGG)n	Simple_repeat	1	41	(0)	807585
12	24.0	4.5	0.0	chr12	19129909	19129952	(114145357)	+	G-rich	Low_complexity	1	46	(0)	807586
15	25.3	0.0	2.0	chr12	19130182	19130230	(114145079)	+	G-rich	Low_complexity	1	49	(0)	807587
18	0.0	4.0	0.0	chr12	19130684	19130708	(114144601)	+	(AGG)n	Simple_repeat	1	26	(0)	807588
31	16.6	1.4	1.4	chr12	19439369	19439437	(113835872)	+	G-rich	Low_complexity	1	70	(0)	808198
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
17	26.9	3.9	2.5	chr12	20368450	20368526	(112906783)	+	(TCCT)n	Simple_repeat	1	80	(0)	809554
15	10.1	2.9	2.9	chr12	20368782	20368829	(112906480)	+	(GCGCA)n	Simple_repeat	1	48	(0)	809555
3090	10.2	2.5	0.8	chr12	21348112	21348587	(111926722)	C	L1MA1	LINE/L1	(5)	6297	5814	810663
263	32.1	8.2	9.6	chr12	21348588	21348662	(111926647)	+	L2a	LINE/L2	2096	2165	(1254)	810662
2180	11.3	1.6	1.0	chr12	21438130	21438438	(111836871)	C	AluSx1	SINE/Alu	(1)	311	1	810768
3714	11.0	6.7	2.6	chr12	22612457	22613531	(110661778)	C	MER11A	LTR/ERVK	(4)	1232	1	812427
2255	11.5	1.3	0.0	chr12	22662068	22662242	(110613067)	C	AluSq2	SINE/Alu	(13)	300	126	812494
26	0.0	0.0	0.0	chr12	22662243	22662267	(110613042)	+	(T)n	Simple_repeat	1	25	(0)	812495
2255	11.5	1.3	0.0	chr12	22662268	22662387	(110612922)	C	AluSq2	SINE/Alu	(193)	120	1	812494
12	19.6	0.0	0.0	chr12	24561719	24561747	(108713562)	+	G-rich	Low_complexity	1	29	(0)	815077
12	19.3	4.7	2.2	chr12	24562109	24562151	(108713158)	+	(CCACCTC)n	Simple_repeat	1	45	(0)	815078
33	6.5	2.0	2.0	chr12	24562449	24562498	(108712811)	+	(TG)n	Simple_repeat	1	51	(0)	815079
19	23.4	5.6	3.2	chr12	25251107	25251196	(108024113)	+	G-rich	Low_complexity	1	95	(0)	816205
24	18.2	1.5	4.3	chr12	25346730	25346797	(107928512)	+	(CCTTC)n	Simple_repeat	1	69	(0)	816349
1853	14.4	1.4	2.8	chr12	25346798	25347088	(107928221)	C	AluJb	SINE/Alu	(19)	293	7	816350
30	0.0	0.0	0.0	chr12	25958634	25958662	(107316647)	+	(GCCCG)n	Simple_repeat	1	29	(0)	817286
20	8.0	0.0	0.0	chr12	26124959	26124985	(107150324)	+	(CA)n	Simple_repeat	1	27	(0)	817539
12	33.5	0.0	0.0	chr12	26125102	26125153	(107150156)	+	G-rich	Low_complexity	1	52	(0)	817540
19	0.0	0.0	0.0	chr12	26225746	26225766	(107049543)	+	(A)n	Simple_repeat	1	21	(0)	817682
16	9.3	0.0	0.0	chr12	26225981	26226003	(107049306)	+	(A)n	Simple_repeat	1	23	(0)	817683
13	8.4	0.0	3.7	chr12	26833321	26833347	(106441962)	+	(GGGGC)n	Simple_repeat	1	27	(0)	818548
14	17.2	5.1	0.0	chr12	26833348	26833366	(106441943)	+	G-rich	Low_complexity	24	62	(0)	818547
25978	2.8	0.0	0.5	chr12	28002995	28008079	(105267230)	C	L1PA3	LINE/L1	(0)	6155	1094	820463
828	6.0	1.7	0.0	chr12	28008059	28008175	(105267134)	C	L1PA3	LINE/L1	(5913)	242	124	820463
1004	21.3	5.4	0.8	chr12	28008277	28008541	(105266768)	C	MER33	DNA/hAT-Charlie	(46)	278	1	820464
735	13.9	1.0	0.0	chr12	28447570	28447670	(104827639)	+	AluJr	SINE/Alu	1	102	(210)	821080
17	14.1	2.4	2.4	chr12	28447676	28447716	(104827593)	+	GA-rich	Low_complexity	1	42	(0)	821081
104	9.7	0.7	0.0	chr12	28447710	28447863	(104827446)	+	(GGGGA)n	Simple_repeat	1	155	(0)	821082
231	36.0	4.4	0.0	chr12	28447868	28447953	(104827356)	+	Tigger19a	DNA/TcMar-Tigger	79	168	(155)	821083
228	34.2	7.5	3.8	chr12	29563733	29564167	(103711142)	C	L2a	LINE/L2	(9)	3417	2941	822534
778	31.1	12.4	6.1	chr12	29564136	29564991	(103710318)	C	L2a	LINE/L2	(903)	2516	1599	822534
14	18.5	2.6	2.5	chr12	30754859	30754897	(102520412)	+	(CTC)n	Simple_repeat	1	40	(0)	824129
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
224	33.7	0.0	2.4	chr12	30946990	30947074	(102328235)	+	Tigger19a	DNA/TcMar-Tigger	178	260	(63)	824442
407	35.0	10.6	8.4	chr12	31117578	31118801	(102156508)	C	L1MDa	LINE/L1	(5629)	1004	402	824695
859	12.3	0.7	2.0	chr12	31118894	31119042	(102156267)	+	HERVE-int	LTR/ERV1	3249	3395	(4418)	824696
468	34.1	9.8	8.8	chr12	31119085	31119883	(102155426)	C	L1MDa	LINE/L1	(5663)	970	402	824697
308	32.6	10.8	6.7	chr12	31120007	31120200	(102155109)	C	L1MDa	LINE/L1	(5781)	852	650	824698
13	11.1	0.0	6.1	chr12	31326451	31326483	(101948826)	+	GA-rich	Low_complexity	1	33	(0)	825005
630	12.4	15.8	1.0	chr12	31497649	31497745	(101777564)	+	AluSx3	SINE/Alu	1	114	(197)	825395
39	30.7	1.1	7.9	chr12	31497746	31497761	(101777548)	+	GA-rich	Low_complexity	1	69	(196)	825396
91	14.8	5.4	0.9	chr12	31497762	31497966	(101777343)	+	G-rich	Low_complexity	1	216	(0)	825397
39	30.7	1.1	7.9	chr12	31497967	31498007	(101777302)	+	GA-rich	Low_complexity	70	265	(0)	825396
18	14.0	2.4	2.3	chr12	31497971	31498012	(101777297)	+	A-rich	Low_complexity	1	43	(0)	825398
13	31.2	1.0	6.1	chr12	31728865	31728961	(101546348)	+	(GGCGG)n	Simple_repeat	1	98	(0)	825911
358	19.2	5.2	0.0	chr12	31967420	31967492	(101307817)	C	Tigger5b	DNA/TcMar-Tigger	(0)	472	396	826477
385	15.4	11.7	1.1	chr12	31967482	31967573	(101307736)	C	Tigger5	DNA/TcMar-Tigger	(2096)	310	208	826478
1060	19.4	5.5	3.3	chr12	31967695	31967907	(101307402)	C	Tigger5b	DNA/TcMar-Tigger	(254)	218	1	826477
275	27.7	0.0	1.2	chr12	32085040	32085123	(101190186)	+	LTR79	LTR/ERVL	381	463	(64)	826791
15	14.4	0.0	0.0	chr12	32085124	32085147	(101190162)	+	(T)n	Simple_repeat	1	24	(0)	826792
1153	9.6	0.0	0.6	chr12	32085148	32085305	(101190004)	C	LTR17	LTR/ERV1	(454)	326	170	826793
825	10.3	0.0	0.0	chr12	32085355	32085461	(101189848)	C	AluYc	SINE/Alu	(7)	292	186	826794
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
779	26.9	18.2	0.8	chr12	32132661	32133049	(101142260)	C	L2a	LINE/L2	(420)	2999	2528	826892
248	23.9	9.5	0.0	chr12	32431941	32432007	(100843302)	+	L2a	LINE/L2	3105	3178	(248)	827475
274	13.9	0.0	0.0	chr12	32432016	32432051	(100843258)	+	AluYk11	SINE/Alu	1	36	(275)	827476
2287	8.2	0.0	0.4	chr12	32432052	32432359	(100842950)	C	AluY	SINE/Alu	(0)	311	1	827477
19	14.6	2.0	4.0	chr12	32896815	32896863	(100378446)	+	(GCCCC)n	Simple_repeat	1	50	(0)	828309
12	12.6	0.0	3.6	chr12	32897112	32897139	(100378170)	+	(GCCCC)n	Simple_repeat	1	28	(0)	828310
18	5.8	8.3	0.0	chr12	33133625	33133660	(100141649)	+	(ATTTT)n	Simple_repeat	1	39	(0)	828665
2570	12.5	0.3	0.3	chr12	33133661	33134045	(100141264)	C	LTR9B	LTR/ERV1	(84)	560	176	828666
1154	20.9	2.3	1.1	chr12	38056199	38056459	(95218850)	C	L1PREC2	LINE/L1	(8)	6152	5889	830609
19	17.8	0.0	5.4	chr12	38056515	38056570	(95218739)	+	(CCCCTCA)n	Simple_repeat	1	56	(0)	830610
2350	9.2	0.0	1.2	chr12	38641222	38641551	(94633758)	+	LTR17	LTR/ERV1	1	326	(454)	831370
247	11.8	0.0	0.0	chr12	38641567	38641600	(94633709)	C	THE1D	LTR/ERVL-MaLR	(341)	34	1	831368
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
16	14.8	0.0	4.9	chr12	42144371	42144411	(91130898)	+	(CCCGCGC)n	Simple_repeat	1	41	(0)	836070
18	19.6	1.7	5.1	chr12	42144639	42144696	(91130613)	+	(CGC)n	Simple_repeat	1	59	(0)	836071
13	5.2	0.0	0.0	chr12	42144751	42144770	(91130539)	+	(CCG)n	Simple_repeat	1	20	(0)	836072
561	27.6	6.0	0.3	chr12	42145087	42145286	(91130023)	+	MIRb	SINE/MIR	6	221	(47)	836073
19	23.2	0.0	3.4	chr12	42237770	42237868	(91037441)	+	(CCCCGC)n	Simple_repeat	1	95	(0)	836251
2365	9.8	0.0	0.3	chr12	42913036	42913332	(90361977)	+	AluSx1	SINE/Alu	2	297	(15)	837369
18	8.5	0.0	0.0	chr12	45051244	45051268	(88224041)	+	(T)n	Simple_repeat	1	25	(0)	840244
2181	25.6	8.7	3.2	chr12	45353679	45355179	(87920130)	+	HAL1	LINE/L1	887	2507	(0)	840703
526	33.3	6.7	1.0	chr12	45355299	45355495	(87919814)	+	L3	LINE/CR1	3870	4078	(21)	840704
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	17.1	5.4	3.4	chr12	45729238	45729306	(87546003)	+	(CCG)n	Simple_repeat	1	70	(0)	841279
32	9.0	3.5	8.0	chr12	45729578	45729664	(87545645)	+	(TCC)n	Simple_repeat	1	83	(0)	841280
44	2.3	0.0	0.0	chr12	45729666	45729709	(87545600)	+	(CGC)n	Simple_repeat	1	44	(0)	841281
15	27.1	3.1	1.5	chr12	45729941	45730004	(87545305)	+	G-rich	Low_complexity	1	66	(0)	841282
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
11	22.1	3.9	3.8	chr12	46383051	46383101	(86892208)	+	(GCGGAG)n	Simple_repeat	1	53	(0)	842182
16	29.1	1.4	4.0	chr12	46383333	46383405	(86891904)	+	GA-rich	Low_complexity	1	74	(0)	842183
35	22.2	7.7	0.0	chr12	46383575	46383704	(86891605)	+	GA-rich	Low_complexity	1	140	(0)	842184
14	18.2	2.6	2.5	chr12	47079630	47079668	(86195641)	+	(AGC)n	Simple_repeat	1	40	(0)	843079
260	27.0	2.6	0.0	chr12	48029368	48029441	(85245868)	+	MIRb	SINE/MIR	178	253	(15)	844570
198	24.0	9.6	6.2	chr12	48029741	48029820	(85245489)	+	OldhAT1	DNA/hAT-Ac	1322	1404	(1444)	844572
14	15.7	5.5	5.2	chr12	48029924	48029978	(85245331)	+	GA-rich	Low_complexity	1	58	(0)	844573
20	22.6	0.0	0.0	chr12	48119197	48119243	(85156066)	+	GA-rich	Low_complexity	1	47	(0)	844727
904	14.4	5.8	0.0	chr12	48199111	48199256	(85076053)	C	FRAM	SINE/Alu	(17)	159	5	844852
379	19.0	9.7	3.2	chr12	48199266	48199390	(85075919)	+	MIR	SINE/MIR	80	213	(49)	844853
34	13.5	3.9	2.5	chr12	48350979	48351055	(84924254)	+	GA-rich	Low_complexity	1	80	(0)	845097
16820	8.1	1.5	1.4	chr12	48552505	48554329	(84720980)	C	L1PA4	LINE/L1	(4326)	2031	177	845330
37	26.2	2.4	5.2	chr12	48788896	48789065	(84486244)	+	(GCCC)n	Simple_repeat	1	174	(0)	845785
13	24.9	4.6	2.9	chr12	48789532	48789596	(84485713)	+	(CCAGCCC)n	Simple_repeat	1	68	(0)	845786
277	30.3	6.2	2.4	chr12	48796418	48796586	(84478723)	+	MLT1N2	LTR/ERVL-MaLR	385	560	(2)	845804
303	29.8	0.8	0.6	chr12	48796591	48796691	(84478618)	+	MIR1_Amn	SINE/MIR	91	192	(70)	845805
1898	23.4	8.6	1.9	chr12	48796692	48797213	(84478096)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	845806
23	0.0	0.0	0.0	chr12	48971839	48971863	(84303446)	+	(GC)n	Simple_repeat	1	25	(0)	846189
43	0.0	0.0	0.0	chr12	48971864	48971900	(84303409)	+	(CA)n	Simple_repeat	1	37	(0)	846190
15	5.3	4.2	10.0	chr12	49060125	49060172	(84215137)	+	(CGGCCGG)n	Simple_repeat	1	50	(0)	846305
13	19.4	8.8	2.7	chr12	49131483	49131550	(84143759)	+	(CCGAGCC)n	Simple_repeat	1	74	(0)	846446
15	29.2	1.6	1.6	chr12	49342065	49342125	(83933184)	+	(CTCC)n	Simple_repeat	1	62	(0)	846998
17	16.3	6.8	3.2	chr12	49707425	49707483	(83567826)	+	(CCGCG)n	Simple_repeat	1	63	(0)	847645
13	29.6	0.0	3.5	chr12	49707465	49707521	(83567788)	+	(CCCT)n	Simple_repeat	1	57	(0)	847646
12	14.5	4.8	4.5	chr12	49827642	49827683	(83447626)	+	(GCTCCCT)n	Simple_repeat	1	44	(0)	847877
16	16.5	0.0	0.0	chr12	49828079	49828105	(83447204)	+	G-rich	Low_complexity	1	27	(0)	847878
13	15.4	0.0	3.2	chr12	49828133	49828163	(83447146)	+	GA-rich	Low_complexity	1	31	(0)	847879
11	20.8	0.0	2.9	chr12	49828456	49828490	(83446819)	+	(CCCCGC)n	Simple_repeat	1	35	(0)	847880
14	15.8	0.0	5.1	chr12	50085553	50085591	(83189718)	+	G-rich	Low_complexity	1	39	(0)	848386
14	23.9	2.3	0.0	chr12	50111478	50111521	(83163788)	+	(CCCT)n	Simple_repeat	1	45	(0)	848422
50260	4.5	1.4	0.1	chr12	50492385	50498326	(82776983)	C	HERVK9-int	LTR/ERVK	(0)	6021	1	849361
4393	6.0	0.0	1.4	chr12	50498327	50498846	(82776463)	C	MER9a1	LTR/ERVK	(0)	513	1	849361
3947	9.8	0.2	1.8	chr12	50911840	50912387	(82362922)	C	LTR17	LTR/ERV1	(0)	780	242	850222
3761	6.4	2.3	1.4	chr12	50912380	50913092	(82362217)	C	MER11A	LTR/ERVK	(305)	961	1	850223
2109	9.6	0.0	1.5	chr12	50948589	50948860	(82326449)	+	AluSc	SINE/Alu	2	269	(40)	850291
54	7.2	4.4	1.1	chr12	50948863	50948953	(82326356)	+	(GGAGGG)n	Simple_repeat	1	95	(0)	850292
540	16.9	9.6	6.0	chr12	50948959	50949109	(82326200)	+	L1MC4a	LINE/L1	5679	5835	(2047)	850290
20	15.0	0.0	4.2	chr12	51217710	51217757	(82057552)	+	G-rich	Low_complexity	1	48	(0)	850861
15	11.7	0.0	0.0	chr12	51217780	51217807	(82057502)	+	(CGGCT)n	Simple_repeat	1	28	(0)	850862
14	18.3	7.5	4.2	chr12	51218118	51218184	(82057125)	+	G-rich	Low_complexity	1	72	(0)	850863
19	14.5	0.0	0.0	chr12	51239466	51239496	(82035813)	+	(A)n	Simple_repeat	1	31	(0)	850917
2461	6.7	0.0	0.3	chr12	51239497	51239794	(82035515)	+	AluSx1	SINE/Alu	1	297	(15)	850918
203	33.6	8.9	0.9	chr12	51590369	51590482	(81684827)	C	MIRc	SINE/MIR	(45)	223	100	851611
57	26.7	0.8	5.8	chr12	51590947	51591185	(81684124)	+	(GCGG)n	Simple_repeat	1	241	(0)	851612
330	21.2	0.0	2.4	chr12	51895483	51895574	(81379735)	+	MIRb	SINE/MIR	10	98	(170)	852106
42	24.5	2.4	5.2	chr12	51951569	51951617	(81323692)	+	(CGG)n	Simple_repeat	1	74	(100)	852208
19	20.4	3.5	1.7	chr12	51951618	51951675	(81323634)	+	G-rich	Low_complexity	1	60	(0)	852209
42	24.5	2.4	5.2	chr12	51951676	51951738	(81323571)	+	(CGG)n	Simple_repeat	75	174	(0)	852208
517	30.9	8.3	4.9	chr12	52787654	52788058	(80487251)	+	L2a	LINE/L2	2201	2620	(799)	853416
333	32.8	8.9	4.7	chr12	52788063	52788276	(80487033)	+	L2a	LINE/L2	3202	3425	(1)	853416
405	27.2	9.8	0.0	chr12	52879836	52879982	(80395327)	+	MER91A	DNA/hAT-Tip100	31	193	(3)	853569
17	24.4	0.0	4.8	chr12	53180926	53180988	(80094321)	+	G-rich	Low_complexity	1	63	(0)	854225
14	15.3	2.6	2.6	chr12	53380190	53380227	(79895082)	+	(GTCCGC)n	Simple_repeat	1	39	(0)	854630
18	7.0	0.0	5.9	chr12	53380385	53380418	(79894891)	+	(GCG)n	Simple_repeat	1	34	(0)	854631
13	20.3	0.0	4.7	chr12	53493035	53493077	(79782232)	+	G-rich	Low_complexity	1	43	(0)	854860
18	7.9	7.1	2.2	chr12	53677189	53677230	(79598079)	+	G-rich	Low_complexity	1	45	(0)	855237
12	15.3	5.3	2.5	chr12	53695646	53695683	(79579626)	+	G-rich	Low_complexity	1	40	(0)	855291
16	13.3	0.0	9.8	chr12	53938781	53938831	(79336478)	+	G-rich	Low_complexity	1	51	(0)	855692
28	25.1	0.0	1.3	chr12	53938973	53939049	(79336260)	+	(GCG)n	Simple_repeat	1	77	(0)	855693
787	14.4	11.1	4.6	chr12	53944619	53944836	(79330473)	C	MER96B	DNA/hAT-Tip100	(183)	234	1	855700
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
12	25.1	0.0	4.3	chr12	54358797	54358842	(78916467)	+	(CCTT)n	Simple_repeat	1	46	(0)	856315
12	30.5	0.0	5.6	chr12	54391299	54391369	(78883940)	+	G-rich	Low_complexity	1	71	(0)	856367
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
10468	5.3	0.9	5.5	chr12	55647752	55649189	(77626120)	C	SVA_B	Retroposon/SVA	(0)	1383	12	857990
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
2241	15.2	6.5	2.7	chr12	56387134	56387431	(76887878)	C	MSTB1	LTR/ERVL-MaLR	(109)	323	5	859437
1241	20.2	0.0	0.5	chr12	56387685	56387708	(76887601)	C	AluJb	SINE/Alu	(4)	308	285	859439
845	12.8	9.4	0.0	chr12	56387709	56387872	(76887437)	C	L1MC2	LINE/L1	(9)	6335	6155	859440
17	19.3	0.0	2.3	chr12	56488251	56488293	(76787016)	+	G-rich	Low_complexity	1	43	(0)	859634
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
12	23.8	2.2	2.1	chr12	56629728	56629773	(76645536)	+	(ACCCCC)n	Simple_repeat	1	47	(0)	859927
227	9.5	7.4	2.2	chr12	56896091	56896562	(76378747)	+	(CA)n	Simple_repeat	1	507	(0)	860438
35	0.0	0.0	0.0	chr12	57220456	57220488	(76054821)	+	(AAATA)n	Simple_repeat	1	33	(0)	860868
11	17.4	0.0	5.6	chr12	57342291	57342326	(75932983)	+	(CCCTCA)n	Simple_repeat	1	36	(0)	861067
35	16.9	0.0	0.0	chr12	57342451	57342519	(75932790)	+	(CACA)n	Simple_repeat	1	69	(0)	861068
871	16.2	7.8	0.0	chr12	57458515	57458668	(75816641)	+	FAM	SINE/Alu	18	184	(1)	861365
38	17.2	0.0	0.0	chr12	57522713	57522784	(75752525)	+	(GGC)n	Simple_repeat	1	72	(0)	861463
22	31.3	1.7	3.4	chr12	57523024	57523140	(75752169)	+	(CCCCGC)n	Simple_repeat	1	119	(0)	861464
12	13.7	6.2	0.0	chr12	57611743	57611774	(75663535)	+	(CCTC)n	Simple_repeat	1	34	(0)	861582
13	8.5	0.0	3.7	chr12	57611811	57611837	(75663472)	+	(CGCCC)n	Simple_repeat	1	27	(0)	861583
19	6.1	2.6	5.1	chr12	57632695	57632732	(75642577)	+	(CCT)n	Simple_repeat	1	39	(0)	861597
13	12.5	0.0	0.0	chr12	57633134	57633159	(75642150)	+	(CGCAG)n	Simple_repeat	1	26	(0)	861598
22	23.1	3.5	3.4	chr12	57738320	57738405	(75536904)	+	(GCCGCC)n	Simple_repeat	1	89	(0)	861769
41	13.8	8.7	0.0	chr12	57941429	57941532	(75333777)	+	(GCCCCTC)n	Simple_repeat	1	113	(0)	862097
6465	9.6	17.1	0.7	chr12	58694899	58695954	(74579355)	+	MER11A	LTR/ERVK	1	1266	(0)	863146
5520	13.8	1.0	1.7	chr12	58695955	58696048	(74579261)	+	L1PA15	LINE/L1	5563	5647	(518)	863145
6068	5.8	3.1	0.4	chr12	58858994	58859752	(74415557)	C	LTR17	LTR/ERV1	(0)	780	1	863331
3622	13.2	6.5	2.7	chr12	59439768	59440847	(73834462)	+	MER11A	LTR/ERVK	1	1236	(0)	864107
13	17.4	0.0	2.9	chr12	59596063	59596096	(73679213)	+	(CGCCTC)n	Simple_repeat	1	34	(0)	864295
21	0.0	5.9	2.8	chr12	59596251	59596284	(73679025)	+	(GGA)n	Simple_repeat	1	36	(0)	864296
768	26.2	6.3	5.3	chr12	63345363	63345763	(69929546)	C	L1ME2	LINE/L1	(14)	6493	5930	869284
253	28.5	4.6	3.1	chr12	63779456	63779568	(69495741)	C	L2a	LINE/L2	(17)	3409	3247	869919
6422	4.9	3.3	0.3	chr12	64319588	64320343	(68954966)	+	LTR17	LTR/ERV1	1	780	(0)	870896
2137	16.7	0.0	0.0	chr12	64331219	64331523	(68943786)	+	AluJo	SINE/Alu	1	305	(7)	870921
1677	16.1	4.4	2.5	chr12	64331525	64331856	(68943453)	+	MLT1A1	LTR/ERVL-MaLR	71	426	(0)	870922
17	15.6	0.0	0.0	chr12	64331945	64331973	(68943336)	+	A-rich	Low_complexity	1	29	(0)	870923
1339	15.7	0.0	0.0	chr12	64717118	64717321	(68557988)	+	Tigger7	DNA/TcMar-Tigger	262	465	(2026)	871687
1795	13.4	0.7	4.1	chr12	64717371	64717662	(68557647)	C	AluJb	SINE/Alu	(30)	282	1	871688
1872	11.0	0.0	0.4	chr12	64751705	64751950	(68523359)	+	AluSx1	SINE/Alu	1	245	(67)	871754
26	13.6	0.0	0.0	chr12	64751952	64751992	(68523317)	+	(A)n	Simple_repeat	1	41	(0)	871755
769	23.8	4.9	0.5	chr12	64751993	64752207	(68523102)	C	MIR	SINE/MIR	(35)	227	3	871756
274	31.4	10.4	0.0	chr12	64752219	64752339	(68522970)	C	L1MD	LINE/L1	(2301)	3845	3711	871757
16	22.7	3.7	1.8	chr12	64781090	64781098	(68494211)	+	(GGC)n	Simple_repeat	1	53	(0)	871797
18	13.8	2.4	2.3	chr12	64781099	64781140	(68494169)	+	(GGCCGCG)n	Simple_repeat	1	43	(0)	871798
53	14.1	4.5	0.9	chr12	65278446	65278556	(67996753)	+	GA-rich	Low_complexity	1	116	(0)	872573
11	21.5	4.4	2.1	chr12	65278562	65278606	(67996703)	+	(GGCGGCC)n	Simple_repeat	1	47	(0)	872574
29	3.2	0.0	0.0	chr12	65278805	65278836	(67996473)	+	(CTCTGC)n	Simple_repeat	1	32	(0)	872575
19	21.1	2.0	0.0	chr12	65278877	65278925	(67996384)	+	(CTCCC)n	Simple_repeat	1	50	(0)	872576
46	29.5	1.9	0.0	chr12	65741513	65741668	(67533641)	+	(GGCGG)n	Simple_repeat	1	159	(0)	873260
31	7.2	2.3	0.0	chr12	65824408	65824451	(67450858)	+	(CA)n	Simple_repeat	1	45	(0)	873412
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
24	25.5	3.7	2.7	chr12	65824931	65824969	(67450340)	+	(CCTCCT)n	Simple_repeat	1	39	(0)	873414
27	3.4	0.0	0.0	chr12	65824970	65824999	(67450310)	+	(ACCTCC)n	Simple_repeat	1	30	(0)	873415
24	25.5	3.7	2.7	chr12	65825000	65825008	(67450301)	+	(CCTCCT)n	Simple_repeat	4	20	(52)	873416
13	23.3	0.0	0.0	chr12	65825009	65825043	(67450266)	+	(CCG)n	Simple_repeat	1	35	(0)	873417
24	25.5	3.7	2.7	chr12	65825044	65825067	(67450242)	+	(CCTCCT)n	Simple_repeat	21	72	(0)	873416
12	10.6	0.0	10.5	chr12	66235170	66235207	(67040102)	+	G-rich	Low_complexity	1	38	(0)	874035
16	30.0	0.0	0.0	chr12	67068824	67068868	(66206441)	+	(CC)n	Simple_repeat	1	45	(0)	875352
16	18.1	0.0	6.1	chr12	67068997	67069045	(66206264)	+	(CGGCCC)n	Simple_repeat	1	49	(0)	875353
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
2031	12.2	1.7	0.3	chr12	67272697	67272991	(66002318)	C	AluSc	SINE/Alu	(10)	299	1	875655
343	21.8	12.1	0.0	chr12	68419874	68419960	(64855349)	C	MIR	SINE/MIR	(2)	260	162	877349
17	24.9	2.6	5.0	chr12	68420034	68420111	(64855198)	+	(CCCT)n	Simple_repeat	1	80	(0)	877350
16	20.5	1.6	6.2	chr12	68420126	68420188	(64855121)	+	A-rich	Low_complexity	1	64	(0)	877351
369	23.5	3.5	11.1	chr12	68798679	68798831	(64476478)	C	LTR78B	LTR/ERV1	(155)	1141	1001	878121
2198	21.6	9.0	2.1	chr12	68798887	68799478	(64475831)	+	MLT1E2	LTR/ERVL-MaLR	1	649	(5)	878122
24	19.3	0.0	0.0	chr12	68808591	68808643	(64466666)	+	(GGCTCGG)n	Simple_repeat	1	53	(0)	878136
13	16.8	0.0	5.4	chr12	68933059	68933095	(64342214)	+	(CCT)n	Simple_repeat	1	37	(0)	878376
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
16	13.3	3.0	0.0	chr12	69240134	69240166	(64035143)	+	(CCG)n	Simple_repeat	1	34	(0)	878961
13	16.7	4.8	2.3	chr12	69470606	69470647	(63804662)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	879354
21	28.2	0.0	3.8	chr12	70366626	70366704	(62908605)	+	(GCG)n	Simple_repeat	1	79	(0)	880783
14	35.6	0.0	1.4	chr12	70610384	70610455	(62664854)	+	(CCCT)n	Simple_repeat	1	70	(0)	881162
4101	17.4	3.6	9.0	chr12	71106148	71107055	(62168254)	+	MER21B	LTR/ERVL	1	857	(11)	881873
31	0.0	2.7	2.6	chr12	71755136	71755172	(61520137)	+	(GCG)n	Simple_repeat	1	38	(0)	882813
1079	27.4	3.5	0.7	chr12	71900568	71900868	(61374441)	C	L2a	LINE/L2	(0)	3426	3117	883070
711	12.0	0.4	0.0	chr12	71900869	71900982	(61374327)	+	L1PREC2	LINE/L1	4076	4192	(1954)	883071
3386	25.4	8.4	3.0	chr12	72144315	72145343	(61129966)	C	L1M4b	LINE/L1	(5760)	1107	18	883437
13	18.6	4.8	6.2	chr12	72272276	72272337	(61002972)	+	(GCGAG)n	Simple_repeat	1	65	(0)	883612
39	30.6	0.7	2.1	chr12	72272612	72272754	(61002555)	+	GA-rich	Low_complexity	1	144	(0)	883613
5081	18.1	1.2	0.0	chr12	72453005	72453893	(60821416)	+	MSTA-int	LTR/ERVL-MaLR	5	904	(747)	883865
1538	9.8	0.8	1.3	chr12	72931708	72931944	(60343365)	C	MER11A	LTR/ERVK	(1)	1265	1030	884410
3151	10.9	4.1	1.5	chr12	72931974	72932633	(60342676)	C	MER11A	LTR/ERVK	(485)	751	1	884410
1758	23.5	13.8	0.5	chr12	73298625	73299287	(59976022)	+	L1ME2	LINE/L1	5392	6157	(7)	884802
235	30.1	2.7	0.0	chr12	73299337	73299409	(59975900)	C	MIR	SINE/MIR	(28)	234	160	884803
52	18.0	1.9	0.0	chr12	73299416	73299520	(59975789)	+	(TCCCT)n	Simple_repeat	1	107	(0)	884804
2254	10.3	0.3	1.3	chr12	73299527	73299838	(59975471)	C	AluSc8	SINE/Alu	(2)	309	1	884805
300	30.4	13.4	0.0	chr12	74892851	74893011	(58382298)	C	MIRb	SINE/MIR	(54)	214	29	886821
544	25.6	15.1	3.0	chr12	74893412	74893608	(58381701)	C	MIR	SINE/MIR	(28)	234	10	886822
23	30.3	4.6	0.9	chr12	75390913	75391020	(57884289)	+	(CCTCTCC)n	Simple_repeat	1	113	(0)	887474
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
17	16.9	2.0	3.9	chr12	76084621	76084670	(57190639)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	888581
16	17.2	7.4	1.7	chr12	77065820	77065843	(56209466)	+	(CGG)n	Simple_repeat	1	57	(0)	890306
16	11.3	0.0	0.0	chr12	77065844	77065872	(56209437)	+	(GGCGC)n	Simple_repeat	1	29	(0)	890307
14	9.6	0.0	0.0	chr12	77065873	77065895	(56209414)	+	(GGA)n	Simple_repeat	1	23	(0)	890308
306	30.4	3.1	3.1	chr12	78491736	78491864	(54783445)	C	MLT1O	LTR/ERVL-MaLR	(331)	211	83	892218
13	20.8	0.0	0.0	chr12	79934521	79934553	(53340756)	+	(CCCT)n	Simple_repeat	1	33	(0)	894280
12	15.3	5.3	2.5	chr12	79934885	79934922	(53340387)	+	(CGCTTC)n	Simple_repeat	1	40	(0)	894281
297	34.0	8.1	6.5	chr12	81118748	81118977	(52156332)	C	L2c	LINE/L2	(8)	3379	3146	896008
4630	9.1	2.6	3.6	chr12	81118980	81120027	(52155282)	C	MER11A	LTR/ERVK	(0)	1266	1	896009
1163	22.0	16.0	3.4	chr12	81409903	81410255	(51865054)	+	MLT1A1	LTR/ERVL-MaLR	1	406	(2)	896357
267	28.6	4.8	0.0	chr12	81410446	81410543	(51864766)	C	Charlie4z	DNA/hAT-Charlie	(57)	110	8	896358
472	30.4	11.5	4.2	chr12	81410592	81411057	(51864252)	+	MLT1K	LTR/ERVL-MaLR	12	586	(9)	896359
4929	12.4	1.3	1.3	chr12	81724328	81725110	(51550199)	C	L1PB4	LINE/L1	(1)	6155	5373	896785
1218	24.4	5.4	10.0	chr12	84445843	84446204	(48829105)	+	MLT2C2	LTR/ERVL	1	345	(119)	900287
6201	10.1	17.3	0.6	chr12	84446205	84447257	(48828052)	C	MER11A	LTR/ERVK	(0)	1266	1	900288
22	33.4	0.0	0.0	chr12	84912766	84912840	(48362469)	+	(GT)n	Simple_repeat	1	75	(0)	900920
34	0.0	0.0	0.0	chr12	88467800	88467831	(44807478)	+	(GGGAG)n	Simple_repeat	1	32	(0)	905543
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
15	21.8	0.0	0.0	chr12	89708841	89708877	(43566432)	+	(GGC)n	Simple_repeat	1	37	(0)	907474
27	23.0	1.4	1.4	chr12	89709271	89709343	(43565966)	+	(CGC)n	Simple_repeat	1	74	(0)	907475
18	12.0	0.0	0.0	chr12	89709389	89709415	(43565894)	+	(GC)n	Simple_repeat	1	27	(0)	907476
11	13.2	5.7	2.7	chr12	89709428	89709462	(43565847)	+	G-rich	Low_complexity	1	37	(0)	907477
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
1032	17.2	0.0	1.3	chr12	92886221	92886377	(40388932)	+	AluJr	SINE/Alu	137	291	(21)	912260
91	25.3	3.8	1.3	chr12	92886378	92886664	(40388645)	+	GA-rich	Low_complexity	1	298	(0)	912261
454	24.1	10.8	3.4	chr12	92886665	92886717	(40388592)	+	L1MDa	LINE/L1	1284	1344	(6157)	912248
12	15.8	0.0	3.3	chr12	93441908	93441937	(39833372)	+	(TCTCG)n	Simple_repeat	1	30	(0)	913432
4434	16.0	0.8	1.3	chr12	93902216	93902929	(39372380)	C	MER50	LTR/ERV1	(23)	711	1	914312
4502	9.3	2.3	3.4	chr12	94398347	94399376	(38875933)	+	MER11A	LTR/ERVK	1	1266	(0)	915134
36	29.3	4.8	0.7	chr12	94424991	94425136	(38850173)	+	GA-rich	Low_complexity	1	153	(0)	915181
2038	15.2	3.0	0.0	chr12	94425152	94425474	(38849835)	+	LTR45B	LTR/ERV1	22	354	(135)	915180
13	0.0	0.0	0.0	chr12	94459808	94459824	(38815485)	+	(GGC)n	Simple_repeat	1	17	(0)	915224
12	19.3	8.5	0.0	chr12	94460065	94460111	(38815198)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	915225
2287	10.4	0.6	2.2	chr12	94606358	94606558	(38668751)	C	AluSz	SINE/Alu	(1)	311	115	915495
6518	8.0	18.8	0.5	chr12	94606559	94607591	(38667718)	C	MER11A	LTR/ERVK	(0)	1266	1	915496
7376	25.4	5.3	9.6	chr12	96346926	96347281	(36928028)	+	L1MB4	LINE/L1	2736	3093	(3551)	918881
1912	14.1	3.1	1.1	chr12	96347282	96347564	(36927745)	+	AluSx	SINE/Alu	1	289	(23)	918886
8580	23.0	5.1	7.6	chr12	96347565	96348282	(36927027)	+	L1MB4	LINE/L1	3094	3727	(2917)	918881
13	4.9	0.0	4.3	chr12	96399430	96399452	(36875857)	+	(CTC)n	Simple_repeat	1	23	(0)	918976
14	25.4	0.0	6.3	chr12	98516105	98516167	(34759142)	+	G-rich	Low_complexity	1	63	(0)	922401
20	22.1	0.0	4.8	chr12	99984569	99984631	(33290678)	+	GA-rich	Low_complexity	1	63	(0)	924662
12	15.7	2.6	5.0	chr12	99984929	99984967	(33290342)	+	(GGCG)n	Simple_repeat	1	40	(0)	924663
4493	10.0	0.8	5.9	chr12	100065039	100066102	(33209207)	+	MER11A	LTR/ERVK	1	1266	(0)	924796
9378	7.1	1.1	1.0	chr12	100066103	100066511	(33208798)	+	L1PB1	LINE/L1	2207	2623	(3523)	924797
5502	11.0	0.5	0.0	chr12	100164249	100164984	(33110325)	C	HERVK22-int	LTR/ERVK	(6096)	741	2	924999
14	21.4	2.2	2.2	chr12	100267187	100267231	(33008078)	+	(CCCCT)n	Simple_repeat	1	46	(0)	925231
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
14814	14.3	6.1	5.4	chr12	104824999	104825896	(28449413)	+	HUERS-P2-int	LTR/ERV1	204	1150	(1938)	933358
189	35.1	7.9	0.8	chr12	104825897	104826025	(28449284)	+	MamSINE1	SINE/tRNA-RTE	44	182	(108)	933359
1941	16.9	0.7	0.0	chr12	104942197	104942491	(28332818)	+	AluJb	SINE/Alu	1	297	(15)	933542
2804	4.3	0.0	0.0	chr12	104943719	104944044	(28331265)	+	LTR17	LTR/ERV1	1	326	(454)	933543
543	15.7	1.0	3.8	chr12	105095105	105095210	(28180099)	C	L1MA3	LINE/L1	(73)	6232	6130	933827
4222	9.2	7.3	4.0	chr12	105095211	105096151	(28179158)	C	MER11A	LTR/ERVK	(134)	1132	1	933829
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
560	25.7	3.6	5.1	chr12	105235510	105235706	(28039603)	C	MIR	SINE/MIR	(32)	230	37	934030
223	25.0	5.9	8.2	chr12	105270631	105270752	(28004557)	+	MIRc	SINE/MIR	85	203	(65)	934092
463	32.6	13.0	0.0	chr12	105270971	105271157	(28004152)	+	MIRb	SINE/MIR	34	248	(20)	934093
186	18.2	6.4	0.0	chr12	105330337	105330380	(27944929)	C	L2c	LINE/L2	(3)	3384	3338	934180
15	12.8	2.8	2.7	chr12	105330657	105330692	(27944617)	+	G-rich	Low_complexity	1	37	(0)	934181
15	21.6	3.5	3.4	chr12	105330920	105330976	(27944333)	+	(GCGCGG)n	Simple_repeat	1	59	(0)	934182
2121	13.5	2.7	2.9	chr12	106036911	106037284	(27238025)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	935488
487	25.0	3.4	6.5	chr12	106037285	106037330	(27237979)	+	LTR79	LTR/ERVL	107	149	(378)	935487
178	23.2	4.8	3.1	chr12	106037357	106037978	(27237331)	+	(TCCTC)n	Simple_repeat	1	652	(0)	935489
235	27.3	11.8	7.4	chr12	106037979	106038180	(27237129)	+	LTR79	LTR/ERVL	176	387	(140)	935487
23	10.7	2.5	0.0	chr12	106139178	106139217	(27136092)	+	(GCG)n	Simple_repeat	1	41	(0)	935685
209	12.4	4.1	1.9	chr12	106896384	106896794	(26378515)	+	G-rich	Low_complexity	1	428	(0)	937028
270	28.8	11.9	2.9	chr12	106896846	106897069	(26378240)	C	MIRb	SINE/MIR	(0)	262	12	937029
13	23.2	0.0	0.0	chr12	106956029	106956064	(26319245)	+	(CCCGGC)n	Simple_repeat	1	36	(0)	937152
11	22.1	3.9	3.8	chr12	106956101	106956151	(26319158)	+	(CCCTGCC)n	Simple_repeat	1	53	(0)	937153
554	18.3	3.4	0.0	chr12	106956654	106956768	(26318541)	C	MamRep1879	DNA/hAT-Tip100?	(90)	126	8	937154
14	18.8	5.0	4.8	chr12	107760887	107760946	(25514363)	+	(GCCGCG)n	Simple_repeat	1	63	(0)	938825
13	11.7	3.6	0.0	chr12	107761083	107761110	(25514199)	+	(CCCGG)n	Simple_repeat	1	29	(0)	938826
15	29.1	5.9	3.2	chr12	108730695	108730813	(24544496)	+	(CCCCAG)n	Simple_repeat	1	126	(0)	940858
18	17.9	0.0	4.2	chr12	108731549	108731596	(24543713)	+	(CCGCCC)n	Simple_repeat	1	48	(0)	940859
14	17.6	0.0	4.8	chr12	109309737	109309778	(23965531)	+	(GGCGCGG)n	Simple_repeat	1	42	(0)	942260
27	16.8	3.7	4.8	chr12	109573825	109573905	(23701404)	+	(CGG)n	Simple_repeat	1	84	(0)	942774
315	28.1	5.5	3.2	chr12	109574024	109574148	(23701161)	+	MIR	SINE/MIR	86	213	(49)	942775
601	25.3	12.7	0.5	chr12	109844945	109845131	(23430178)	C	MIRb	SINE/MIR	(2)	266	54	943461
13	5.2	0.0	0.0	chr12	109845140	109845159	(23430150)	+	(GGT)n	Simple_repeat	1	20	(0)	943462
12	10.9	0.0	8.6	chr12	109845494	109845528	(23429781)	+	(GGCGCA)n	Simple_repeat	1	35	(0)	943463
13	24.4	0.0	4.3	chr12	110281353	110281399	(22993910)	+	(CGCCC)n	Simple_repeat	1	47	(0)	944414
16	16.0	2.2	4.3	chr12	110281725	110281770	(22993539)	+	(GAGGC)n	Simple_repeat	1	47	(0)	944415
148	27.5	4.1	2.0	chr12	110820476	110821036	(22454273)	+	(TCCTCC)n	Simple_repeat	1	573	(0)	945633
32	8.7	0.0	1.9	chr12	110821039	110821090	(22454219)	+	(CTT)n	Simple_repeat	1	52	(0)	945634
261	18.5	0.6	4.9	chr12	111257182	111257813	(22017496)	+	(CTC)n	Simple_repeat	1	636	(0)	946633
2317	7.5	0.3	0.7	chr12	111590895	111591188	(21684121)	C	AluYk3	SINE/Alu	(18)	293	1	947430
1461	17.8	7.1	5.5	chr12	111591189	111591285	(21684024)	+	MER1B	DNA/hAT-Charlie	245	339	(0)	947429
1511	16.8	10.1	0.0	chr12	111591388	111591655	(21683654)	+	AluJb	SINE/Alu	1	298	(14)	947431
186	20.8	0.0	10.2	chr12	111591688	111591746	(21683563)	+	MIRc	SINE/MIR	93	145	(123)	947432
17	16.6	6.4	0.0	chr12	111598828	111598874	(21676435)	+	(CGAGGA)n	Simple_repeat	1	50	(0)	947447
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
393	21.6	3.3	1.1	chr12	112573424	112573512	(20701797)	C	MIR	SINE/MIR	(1)	261	171	949579
260	27.8	4.4	0.9	chr12	112573709	112573817	(20701492)	C	L2a	LINE/L2	(345)	3081	2969	949580
285	27.8	2.3	4.4	chr12	112573865	112575083	(20700226)	+	GA-rich	Low_complexity	1	1247	(0)	949581
738	35.2	7.5	1.6	chr12	113865034	113865574	(19409735)	+	L2a	LINE/L2	2836	3426	(0)	952652
28	15.2	0.0	0.0	chr12	114703523	114703591	(18571718)	+	(T)n	Simple_repeat	1	69	(0)	954294
339	26.8	7.4	3.0	chr12	115010965	115011225	(18264084)	C	L1MEd	LINE/L1	(3785)	2361	2064	955072
4650	13.6	3.1	4.7	chr12	115011226	115012038	(18263271)	C	L1MC1	LINE/L1	(0)	6333	5534	955073
114	13.4	0.9	2.4	chr12	115698191	115698400	(17576909)	+	G-rich	Low_complexity	1	212	(0)	956584
237	22.8	3.7	1.2	chr12	115698417	115698496	(17576813)	+	L1ME4c	LINE/L1	442	523	(307)	956585
661	26.9	3.3	1.7	chr12	115763912	115764089	(17511220)	C	MIR	SINE/MIR	(71)	191	11	956732
19	8.2	0.0	0.0	chr12	115764246	115764271	(17511038)	+	(T)n	Simple_repeat	1	26	(0)	956733
574	27.4	12.6	8.3	chr12	115764393	115764802	(17510507)	+	MLT1K	LTR/ERVL-MaLR	152	581	(14)	956734
656	19.4	6.9	0.0	chr12	115782097	115782230	(17493079)	C	MER5A1	DNA/hAT-Charlie	(22)	144	1	956772
14	11.1	3.5	0.0	chr12	115782338	115782366	(17492943)	+	(AGGGA)n	Simple_repeat	1	30	(0)	956773
13	8.7	4.0	0.0	chr12	115782444	115782468	(17492841)	+	(TTCC)n	Simple_repeat	1	26	(0)	956774
1740	16.1	0.3	6.3	chr12	115799350	115799666	(17475643)	+	AluJb	SINE/Alu	1	298	(14)	956806
928	21.7	8.7	5.8	chr12	115799667	115799968	(17475341)	+	MLT1B	LTR/ERVL-MaLR	184	467	(0)	956805
2231	10.9	0.3	4.1	chr12	116031298	116031617	(17243692)	+	AluY	SINE/Alu	1	308	(3)	957255
28	0.0	0.0	0.0	chr12	116031618	116031644	(17243665)	+	(GGAGG)n	Simple_repeat	1	27	(0)	957256
31	8.7	0.0	2.0	chr12	116031660	116031675	(17243634)	+	(GGAA)n	Simple_repeat	1	16	(0)	957257
99	0.0	0.0	0.0	chr12	116031676	116031762	(17243547)	+	(AAAAG)n	Simple_repeat	1	87	(0)	957258
12	10.0	0.0	0.0	chr12	116276617	116276638	(16998671)	+	(AGGC)n	Simple_repeat	1	22	(0)	957621
20	19.6	1.5	6.0	chr12	116277602	116277668	(16997641)	+	(TCC)n	Simple_repeat	1	64	(0)	957622
21	24.9	1.4	2.8	chr12	116277749	116277818	(16997491)	+	(GGC)n	Simple_repeat	1	71	(0)	957623
17	10.8	0.0	0.0	chr12	116277869	116277898	(16997411)	+	(GAGG)n	Simple_repeat	1	30	(0)	957624
1156	26.9	6.3	2.2	chr12	116473712	116474039	(16801270)	+	L1ME3B	LINE/L1	5719	6062	(180)	958147
114	6.3	0.0	0.0	chr12	116474069	116474204	(16801105)	+	(CCCCT)n	Simple_repeat	1	136	(0)	958149
21	6.7	0.0	0.0	chr12	116474205	116474236	(16801073)	+	(TCCTT)n	Simple_repeat	1	32	(0)	958150
15	32.4	1.1	3.3	chr12	116819327	116819415	(16455894)	+	(GGCCCGG)n	Simple_repeat	1	90	(0)	959020
319	20.8	15.1	0.0	chr12	116819745	116819840	(16455469)	C	L1ME3	LINE/L1	(1)	6161	6049	959021
21	20.9	0.0	0.0	chr12	117011103	117011142	(16264167)	+	(T)n	Simple_repeat	1	40	(0)	959404
12	12.2	3.7	0.0	chr12	117069095	117069121	(16206188)	+	(TTCTT)n	Simple_repeat	1	28	(0)	959495
316	25.9	0.0	1.2	chr12	117069167	117069248	(16206061)	C	Arthur1C	DNA/hAT-Tip100	(3)	360	280	959496
2190	10.1	0.7	0.0	chr12	117069250	117069537	(16205772)	C	AluSz	SINE/Alu	(22)	290	1	959497
20	30.2	3.8	1.8	chr12	117361321	117361425	(15913884)	+	(CCCTC)n	Simple_repeat	1	109	(0)	960165
239	32.0	4.6	0.1	chr12	117850283	117850397	(15424912)	C	L2c	LINE/L2	(205)	3170	3053	961208
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
12	5.5	0.0	0.0	chr12	117969131	117969149	(15306160)	+	(GGA)n	Simple_repeat	1	19	(0)	961514
19	21.7	1.8	1.8	chr12	117969235	117969289	(15306020)	+	(GCGA)n	Simple_repeat	1	56	(0)	961515
2458	5.3	0.0	0.3	chr12	118410556	118410896	(14864413)	C	AluYm1	SINE/Alu	(0)	311	1	962505
14	13.7	0.0	5.6	chr12	118410983	118411018	(14864291)	+	(TTTTG)n	Simple_repeat	1	36	(0)	962506
387	23.3	8.5	0.0	chr12	118411253	118411338	(14863971)	C	MamRep137	DNA/TcMar-Tigger	(0)	510	417	962507
208	37.4	3.2	3.2	chr12	118499089	118499182	(14776127)	+	L2b	LINE/L2	3275	3368	(7)	962686
56	17.9	3.1	1.5	chr12	118499345	118499473	(14775836)	+	(CTCTC)n	Simple_repeat	1	133	(0)	962687
2126	11.8	1.0	0.0	chr12	118499474	118499761	(14775548)	C	AluSx	SINE/Alu	(20)	292	2	962688
5568	16.3	5.0	6.8	chr12	119396849	119398589	(13876720)	C	LTR12D	LTR/ERV1	(9)	1570	3	964689
12	17.6	0.0	5.6	chr12	119988991	119989026	(13286283)	+	(CGC)n	Simple_repeat	1	36	(0)	966004
17	3.3	6.1	2.9	chr12	120116651	120116683	(13158626)	+	(GGCG)n	Simple_repeat	1	35	(0)	966261
15	27.2	1.6	3.2	chr12	120116778	120116838	(13158471)	+	(CCT)n	Simple_repeat	1	62	(0)	966262
14	8.3	3.9	0.0	chr12	120367536	120367561	(12907748)	+	(GGGA)n	Simple_repeat	1	27	(0)	966844
27	28.5	3.2	2.3	chr12	120389389	120389512	(12885797)	+	G-rich	Low_complexity	1	128	(0)	966906
272	20.4	2.2	3.4	chr12	120389577	120389939	(12885370)	+	GA-rich	Low_complexity	1	359	(0)	966907
19	0.0	0.0	0.0	chr12	120439594	120439617	(12835692)	+	(TTA)n	Simple_repeat	1	24	(0)	967088
874	20.2	4.6	10.7	chr12	120439734	120439966	(12835343)	C	MER20	DNA/hAT-Charlie	(1)	218	1	967089
182	28.1	3.3	16.0	chr12	120440046	120440151	(12835158)	C	MER5A	DNA/hAT-Charlie	(95)	94	3	967090
25	18.9	4.3	5.2	chr12	120469569	120469661	(12805648)	+	(CCG)n	Simple_repeat	1	97	(0)	967152
12	17.3	11.7	1.5	chr12	120999561	120999620	(12275689)	+	(CCAG)n	Simple_repeat	1	67	(0)	968338
325	25.2	10.9	2.1	chr12	121297449	121297590	(11977719)	C	MamTip1	DNA/hAT-Tip100	(111)	156	1	969063
19	16.8	2.0	3.9	chr12	121352690	121352740	(11922569)	+	(GTT)n	Simple_repeat	1	52	(0)	969185
782	16.2	4.4	1.3	chr12	121352743	121352896	(11922413)	C	FAM	SINE/Alu	(14)	171	13	969186
15	0.0	0.0	0.0	chr12	121537915	121537933	(11737376)	+	(CGG)n	Simple_repeat	1	19	(0)	969616
17	26.2	0.0	6.5	chr12	121712666	121712742	(11562567)	+	G-rich	Low_complexity	1	77	(0)	970150
210	31.4	1.4	1.4	chr12	121748864	121748934	(11526375)	C	MIRb	SINE/MIR	(178)	90	20	970250
11	19.6	2.8	9.6	chr12	122774536	122774606	(10500703)	+	G-rich	Low_complexity	1	73	(0)	972649
514	34.5	9.0	3.3	chr12	122887199	122887803	(10387506)	+	L2b	LINE/L2	2727	3374	(1)	972869
19	13.3	2.3	2.3	chr12	122966098	122966140	(10309169)	+	(GCTGCGG)n	Simple_repeat	1	44	(0)	973066
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
15	24.3	1.8	3.5	chr12	123364930	123364986	(9910323)	+	(CTCC)n	Simple_repeat	1	58	(0)	973886
51	22.1	4.2	4.9	chr12	123533539	123533720	(9741589)	+	G-rich	Low_complexity	1	180	(0)	974333
33	2.9	0.0	0.0	chr12	123533721	123533755	(9741554)	+	(GGC)n	Simple_repeat	1	35	(0)	974334
51	22.1	4.2	4.9	chr12	123533756	123533787	(9741522)	+	G-rich	Low_complexity	181	212	(0)	974335
212	35.8	10.2	0.0	chr12	123534618	123534810	(9740499)	+	L2c	LINE/L2	3120	3334	(53)	974336
2264	8.7	0.0	3.7	chr12	123584034	123584210	(9691099)	+	AluSz	SINE/Alu	134	310	(2)	974477
29	0.0	3.2	0.0	chr12	123584561	123584591	(9690718)	+	(GCG)n	Simple_repeat	1	32	(0)	974479
1166	17.3	2.3	0.0	chr12	123840010	123840217	(9435092)	C	MER20	DNA/hAT-Charlie	(0)	219	7	975048
17	24.8	4.8	0.0	chr12	123972426	123972436	(9302873)	+	(CCCGG)n	Simple_repeat	1	62	(0)	975247
13	24.5	4.2	0.0	chr12	123972437	123972484	(9302825)	+	(CCGCCG)n	Simple_repeat	1	50	(0)	975248
19	18.7	6.6	3.4	chr12	123972586	123972677	(9302632)	+	G-rich	Low_complexity	1	94	(0)	975249
462	26.4	2.3	2.3	chr12	124015523	124015654	(9259655)	C	MER94	DNA/hAT-Blackjack	(1)	133	2	975299
243	27.6	17.8	1.6	chr12	124015669	124015856	(9259453)	C	MER102a	DNA/hAT-Charlie	(30)	300	76	975300
13	10.4	6.5	0.0	chr12	124325132	124325162	(8950147)	+	(CCCCTT)n	Simple_repeat	1	33	(0)	975885
43	4.3	0.0	0.0	chr12	124567591	124567638	(8707671)	+	(CGG)n	Simple_repeat	1	48	(0)	976293
11	21.6	0.0	4.9	chr12	124567641	124567681	(8707628)	+	G-rich	Low_complexity	1	41	(0)	976294
18	12.2	0.0	0.0	chr12	124567787	124567833	(8707476)	+	(CA)n	Simple_repeat	1	47	(0)	976295
276	22.2	10.4	0.4	chr12	124568273	124568359	(8706950)	+	L2a	LINE/L2	3279	3382	(5)	976296
703	30.1	1.0	0.5	chr12	124688630	124688836	(8586473)	C	MIR	SINE/MIR	(37)	225	18	976584
497	29.1	11.3	1.6	chr12	124746375	124746566	(8528743)	+	MIR	SINE/MIR	50	262	(0)	976734
367	30.8	2.9	4.3	chr12	124766900	124767106	(8508203)	C	MamRep4096	DNA/hAT-Tip100	(220)	206	3	976784
192	27.2	6.6	0.9	chr12	124767272	124767377	(8507932)	C	L2b	LINE/L2	(0)	3387	3241	976785
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
248	21.8	1.3	3.7	chr12	124940188	124940268	(8335041)	C	MER5A	DNA/hAT-Charlie	(63)	126	48	977202
889	17.7	2.2	2.2	chr12	125007968	125008152	(8267157)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	977368
2649	4.5	0.3	0.6	chr12	125008300	125008610	(8266699)	C	AluY	SINE/Alu	(1)	310	1	977369
16	9.9	0.0	5.6	chr12	125049863	125049898	(8225411)	+	G-rich	Low_complexity	1	36	(0)	977468
17	8.7	0.0	7.0	chr12	125050059	125050070	(8225239)	+	(AATAATT)n	Simple_repeat	1	11	(0)	977469
2431	6.7	0.3	0.3	chr12	125050071	125050369	(8224940)	+	AluSc	SINE/Alu	1	299	(10)	977470
1618	22.4	7.1	0.0	chr12	125160596	125160934	(8114375)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	977674
330	21.2	7.0	1.1	chr12	125160978	125161091	(8114218)	C	L1ME3Cz	LINE/L1	(431)	566	468	977675
46	26.9	3.1	1.2	chr12	125161257	125161304	(8114005)	+	(CTCTCT)n	Simple_repeat	1	136	(43)	977676
48	22.2	2.6	0.0	chr12	125161305	125161419	(8113890)	+	(CT)n	Simple_repeat	1	118	(0)	977677
48	22.5	4.1	3.4	chr12	125313353	125313521	(7961788)	+	(TTCC)n	Simple_repeat	1	176	(0)	978015
67	20.7	7.3	4.3	chr12	125313522	125313707	(7961602)	+	(CCTTC)n	Simple_repeat	5	369	(0)	978016
2484	20.3	1.7	4.0	chr12	125402892	125403444	(7871865)	+	LTR55	LTR/ERVL?	1	540	(8)	978183
21	22.1	0.0	5.7	chr12	125494776	125494845	(7780464)	+	(TCC)n	Simple_repeat	1	70	(0)	978305
11	21.5	6.0	1.9	chr12	125495243	125495292	(7780017)	+	(CCTCCTC)n	Simple_repeat	1	53	(0)	978306
455	26.6	5.3	10.0	chr12	125495322	125495542	(7779767)	+	LTR33	LTR/ERVL	212	418	(102)	978307
551	32.2	6.0	3.0	chr12	126891271	126891606	(6383703)	C	MLT1J2	LTR/ERVL-MaLR	(92)	356	10	980571
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
134	1.9	3.0	2.3	chr12	127166172	127166337	(6108972)	+	(CCGAGGCCGA)n	Simple_repeat	1	171	(0)	981019
122	10.3	2.3	6.0	chr12	129698520	129698781	(3576528)	+	G-rich	Low_complexity	1	268	(0)	985494
23	16.2	1.4	8.0	chr12	129698766	129698839	(3576470)	+	GA-rich	Low_complexity	1	75	(0)	985495
1862	27.5	4.7	3.3	chr12	130609553	130610093	(2665216)	C	MLT2B3	LTR/ERVL	(4)	550	2	986934
19	17.2	3.6	3.5	chr12	130839323	130839378	(2435931)	+	G-rich	Low_complexity	1	58	(0)	987296
1861	16.1	0.3	0.3	chr12	130847596	130847893	(2427416)	C	AluJb	SINE/Alu	(8)	304	7	987315
273	15.0	0.0	0.0	chr12	130862075	130862114	(2413195)	C	AluSz6	SINE/Alu	(198)	114	75	987356
1004	17.8	1.1	0.5	chr12	130862112	130862297	(2413012)	C	MLT1A0	LTR/ERVL-MaLR	(178)	187	1	987354
1045	26.9	13.8	4.7	chr12	130862349	130862631	(2412678)	+	L2a	LINE/L2	2913	3196	(230)	987357
2428	8.8	0.3	0.0	chr12	130862632	130862939	(2412370)	C	AluSx1	SINE/Alu	(3)	309	1	987358
1026	14.4	18.5	1.9	chr12	130871186	130871400	(2403909)	+	AluJr	SINE/Alu	37	295	(17)	987384
14	5.0	0.0	0.0	chr12	130871534	130871554	(2403755)	+	(CATT)n	Simple_repeat	1	21	(0)	987385
34	6.7	0.0	0.0	chr12	131682523	131682570	(1592739)	+	(AGGGG)n	Simple_repeat	1	48	(0)	988444
5137	7.8	0.1	1.1	chr12	131873229	131873966	(1401343)	C	LTR17	LTR/ERV1	(49)	731	1	988741
227	26.9	2.5	0.0	chr12	131893975	131894052	(1381257)	+	L1ME4b	LINE/L1	322	401	(491)	988781
38	29.2	5.5	3.8	chr12	131894105	131894357	(1380952)	+	GA-rich	Low_complexity	1	267	(0)	988782
12	19.4	0.0	5.1	chr12	131895836	131895874	(1379435)	+	G-rich	Low_complexity	1	39	(0)	988785
1442	11.3	1.4	1.9	chr12	131949290	131949502	(1325807)	+	AluSz	SINE/Alu	1	212	(100)	988880
13	28.9	0.0	5.7	chr12	131949668	131949737	(1325572)	+	(GCCCC)n	Simple_repeat	1	70	(0)	988881
17	7.9	0.0	0.0	chr12	132162027	132162053	(1113256)	+	(GCCCT)n	Simple_repeat	1	27	(0)	989145
443	27.8	9.2	7.7	chr12	132194122	132194470	(1080839)	+	MamGypLTR3a	LTR/Gypsy	555	862	(119)	989198
2520	7.4	0.0	0.3	chr12	132468884	132469195	(806114)	+	AluY	SINE/Alu	1	311	(0)	989498
519	30.3	2.6	7.7	chr12	132469196	132469278	(806031)	C	L2a	LINE/L2	(155)	3271	3191	989496
1444	21.0	6.9	1.2	chr12	132469283	132469680	(805629)	+	L1MA9	LINE/L1	4815	5232	(914)	989499
25	15.2	0.0	3.6	chr12	132470429	132470484	(804825)	+	GA-rich	Low_complexity	1	56	(0)	989500
28	8.6	0.0	0.0	chr12	132470489	132470526	(804783)	+	(AC)n	Simple_repeat	1	38	(0)	989501
33	14.6	0.0	6.2	chr12	132470542	132470621	(804688)	+	G-rich	Low_complexity	1	80	(0)	989502
18	18.1	0.0	0.0	chr12	132470628	132470660	(804649)	+	(AC)n	Simple_repeat	1	33	(0)	989503
79	17.1	1.1	2.8	chr12	132470685	132470745	(804564)	+	G-rich	Low_complexity	1	61	(0)	989504
40	6.7	0.0	0.0	chr12	132470746	132470793	(804516)	+	(AC)n	Simple_repeat	1	48	(0)	989505
2283	13.1	0.3	0.3	chr12	132487889	132488200	(787109)	+	AluSx	SINE/Alu	1	312	(0)	989527
2320	8.3	2.7	0.0	chr12	132519629	132519918	(755391)	+	AluSg7	SINE/Alu	1	298	(11)	989558
1353	17.7	1.3	7.3	chr12	132686748	132686870	(588439)	C	AluJb	SINE/Alu	(196)	116	1	989770
13	28.4	3.3	1.6	chr12	132687508	132687568	(587741)	+	(GGCGC)n	Simple_repeat	1	63	(0)	989772
14	22.0	2.4	0.0	chr12	132687578	132687619	(587690)	+	(GCGCTCC)n	Simple_repeat	1	43	(0)	989773
2257	9.8	0.0	0.0	chr12	132729071	132729357	(545952)	+	AluSg4	SINE/Alu	1	287	(23)	989851
75	23.6	6.2	2.5	chr12	132729358	132729663	(545646)	+	GA-rich	Low_complexity	1	325	(0)	989852
27	0.0	0.0	0.0	chr12	132828740	132828765	(446544)	+	(GCGGGA)n	Simple_repeat	1	26	(0)	990001
788	24.0	11.7	4.2	chr12	132829476	132829883	(445426)	C	L1MD	LINE/L1	(1498)	4648	4206	990002
21	6.4	0.0	2.9	chr12	132887158	132887192	(388117)	+	(CCCGGC)n	Simple_repeat	1	35	(0)	990111
31	34.1	0.7	1.4	chr12	132954339	132954478	(320831)	+	G-rich	Low_complexity	1	141	(0)	990228
506	27.5	6.3	1.3	chr12	132985913	132986063	(289246)	C	L1MB7	LINE/L1	(3665)	2550	2392	990290
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
22	3.8	0.0	0.0	chr12	133081345	133081371	(193938)	+	(AT)n	Simple_repeat	1	27	(0)	990481
577	12.5	7.5	5.8	chr12	133081374	133081477	(193832)	C	AluJr4	SINE/Alu	(14)	298	193	990482
12	15.6	3.5	0.0	chr12	133130499	133130527	(144782)	+	(GTGT)n	Simple_repeat	1	30	(0)	990566
891	10.9	11.2	0.0	chr12	133180979	133181161	(94148)	+	Charlie1a	DNA/hAT-Charlie	1078	1283	(172)	990654
400	24.1	4.1	2.1	chr12	133181177	133181320	(93989)	C	L1MEg	LINE/L1	(4318)	1766	1620	990655
19	11.0	2.4	2.4	chr13	19863432	19863472	(94500856)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	993246
16	11.7	0.0	0.0	chr13	19958702	19958735	(94405593)	+	(CCT)n	Simple_repeat	1	34	(0)	993492
20	16.3	0.0	0.0	chr13	19958915	19958955	(94405373)	+	(CGGAGG)n	Simple_repeat	1	41	(0)	993493
13	14.7	3.3	0.0	chr13	19959005	19959034	(94405294)	+	(CCG)n	Simple_repeat	1	31	(0)	993494
153	25.4	2.0	4.1	chr13	20391058	20391610	(93972718)	+	G-rich	Low_complexity	1	564	(0)	994196
2545	7.4	0.0	0.0	chr13	20903346	20903656	(93460672)	C	AluSx1	SINE/Alu	(1)	311	1	995068
18	23.0	0.0	0.0	chr13	23135879	23135915	(91228413)	+	A-rich	Low_complexity	1	37	(0)	998424
8093	12.7	12.3	1.7	chr13	24623230	24624586	(89739742)	+	LTR12C	LTR/ERV1	59	1579	(0)	1000541
705	15.8	0.8	1.7	chr13	26930082	26930201	(87434127)	+	FLAM_A	SINE/Alu	1	119	(23)	1004029
15	15.5	0.0	0.0	chr13	26930202	26930231	(87434097)	+	(TACA)n	Simple_repeat	1	30	(0)	1004030
21	20.9	4.9	8.1	chr13	27171732	27171873	(87192455)	+	(CGGCCCC)n	Simple_repeat	1	149	(0)	1004433
2143	10.3	1.0	0.7	chr13	27520383	27520683	(86843645)	+	AluSc	SINE/Alu	2	303	(6)	1005106
48	14.0	2.2	1.1	chr13	27520689	27520780	(86843548)	+	GA-rich	Low_complexity	1	94	(0)	1005107
322	13.7	1.9	0.0	chr13	27520783	27520833	(86843495)	C	LTR47A	LTR/ERVL	(400)	52	1	1005105
257	13.5	16.1	0.0	chr13	27520834	27520885	(86843443)	+	L1MB7	LINE/L1	5809	5870	(314)	1005104
1248	9.9	0.0	0.0	chr13	27520886	27521046	(86843282)	+	AluSx1	SINE/Alu	137	297	(15)	1005108
22	21.7	4.6	0.0	chr13	27969177	27969189	(86395139)	+	(TCCC)n	Simple_repeat	1	67	(0)	1005830
18	15.5	7.8	0.0	chr13	27969190	27969240	(86395088)	+	(CCTTCCT)n	Simple_repeat	1	55	(0)	1005831
4279	15.0	2.5	1.5	chr13	28609902	28610653	(85753675)	C	L1MB3	LINE/L1	(1)	6182	5423	1007032
188	31.3	3.5	1.2	chr13	28610831	28610914	(85753414)	+	L2c	LINE/L2	3253	3338	(49)	1007033
238	30.0	4.3	7.6	chr13	28610937	28611055	(85753273)	C	MIRc	SINE/MIR	(138)	130	16	1007034
88	6.3	0.8	0.8	chr13	28819717	28819833	(85544495)	+	(GGCTGG)n	Simple_repeat	1	118	(0)	1007379
890	22.6	15.0	4.3	chr13	29183920	29184384	(85179944)	C	L1ME2z	LINE/L1	(4)	6440	5925	1007858
430	26.4	10.7	7.4	chr13	29589769	29589985	(84774343)	+	MIRb	SINE/MIR	32	256	(12)	1008346
269	36.1	12.3	5.5	chr13	29835186	29835453	(84528875)	C	L2a	LINE/L2	(84)	3342	3064	1008689
2406	9.2	0.0	6.4	chr13	29835454	29835781	(84528547)	+	AluSc	SINE/Alu	1	307	(2)	1008691
655	32.7	16.6	3.1	chr13	29835782	29836264	(84528064)	C	L2a	LINE/L2	(312)	3063	2506	1008689
391	28.4	6.1	1.2	chr13	30342243	30342413	(84021915)	C	MIRb	SINE/MIR	(82)	186	7	1009495
12	15.5	3.5	0.0	chr13	30464885	30464913	(83899415)	+	G-rich	Low_complexity	1	30	(0)	1009739
15	11.7	0.0	0.0	chr13	30464913	30464940	(83899388)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1009740
15	28.6	1.5	2.9	chr13	30464956	30465022	(83899306)	+	(CCGC)n	Simple_repeat	1	68	(0)	1009741
12	9.2	0.0	4.0	chr13	30465086	30465110	(83899218)	+	(CGCC)n	Simple_repeat	1	25	(0)	1009742
72	20.3	5.0	5.1	chr13	30465170	30465450	(83898878)	+	(CGC)n	Simple_repeat	1	295	(0)	1009743
666	0.0	0.0	0.0	chr13	30673964	30674037	(83690291)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	1010174
20	28.8	4.6	1.8	chr13	32427747	32427854	(81936474)	+	(GGCTGG)n	Simple_repeat	1	113	(0)	1012749
18	24.2	0.0	0.0	chr13	32427992	32428040	(81936288)	+	(GCGGCT)n	Simple_repeat	1	49	(0)	1012750
300	28.0	16.0	0.0	chr13	36284629	36284728	(78079600)	+	LTR81C	LTR/Gypsy	116	234	(44)	1018316
340	28.3	11.4	5.5	chr13	36284945	36285198	(78079130)	+	LTR81C	LTR/Gypsy	877	1147	(6)	1018316
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
787	30.4	4.8	0.3	chr13	37790569	37790868	(76573460)	+	MER110	LTR/ERV1	166	479	(12)	1020459
18	21.6	2.1	0.0	chr13	39603217	39603264	(74761064)	+	(CCTCC)n	Simple_repeat	1	49	(0)	1022860
27	0.0	0.0	0.0	chr13	40703256	40703281	(73661047)	+	(AACA)n	Simple_repeat	1	26	(0)	1024561
1037	18.9	1.9	15.3	chr13	40703282	40703438	(73660890)	+	L1MC4a	LINE/L1	6843	7003	(879)	1024556
2843	17.9	4.6	3.2	chr13	40703442	40703938	(73660390)	+	MSTB-int	LTR/ERVL-MaLR	1089	1598	(53)	1024562
15	18.3	0.0	2.6	chr13	40789604	40789642	(73574686)	+	(GAGCCG)n	Simple_repeat	1	39	(0)	1024731
31715	14.7	1.8	1.1	chr13	40875044	40880825	(73483503)	C	HERVE-int	LTR/ERV1	(1914)	5899	1	1024831
2052	18.2	10.5	1.7	chr13	41453854	41455553	(72908775)	+	SATR1	Satellite	1	1849	(0)	1025872
238	24.0	0.0	0.0	chr13	41509948	41509997	(72854331)	+	L1MEc	LINE/L1	37	86	(6314)	1025952
3610	14.8	4.8	1.7	chr13	41510080	41510683	(72853645)	C	MER21B	LTR/ERVL	(116)	752	129	1025953
2466	8.1	0.3	0.0	chr13	41975258	41975564	(72388764)	+	AluSc5	SINE/Alu	2	309	(0)	1026637
17	23.2	3.8	4.9	chr13	42040494	42040572	(72323756)	+	G-rich	Low_complexity	1	82	(0)	1026755
9180	12.4	1.4	2.6	chr13	42446070	42447556	(71916772)	+	THE1C-int	LTR/ERVL-MaLR	4	1471	(160)	1027385
49	20.6	7.9	0.6	chr13	43374058	43374222	(70990106)	+	(TCCCT)n	Simple_repeat	1	178	(0)	1028778
2255	13.3	0.3	0.0	chr13	43374223	43374542	(70989786)	C	AluJb	SINE/Alu	(0)	312	3	1028779
11	27.6	0.0	0.0	chr13	43786271	43786309	(70578019)	+	G-rich	Low_complexity	1	39	(0)	1029332
15	15.9	2.9	0.0	chr13	43786684	43786718	(70577610)	+	(CGCGG)n	Simple_repeat	1	36	(0)	1029333
12	12.0	0.0	6.5	chr13	43786718	43786748	(70577580)	+	(CTC)n	Simple_repeat	1	31	(0)	1029334
17	34.5	0.0	0.0	chr13	43786939	43786994	(70577334)	+	(GC)n	Simple_repeat	1	56	(0)	1029335
104	24.8	1.9	5.1	chr13	43977618	43977982	(70386346)	+	(TCCT)n	Simple_repeat	1	372	(0)	1029607
135	28.2	3.1	3.0	chr13	44277111	44277627	(70086701)	+	A-rich	Low_complexity	1	517	(0)	1030034
23	19.9	2.0	8.7	chr13	44577328	44577429	(69786899)	+	GA-rich	Low_complexity	1	104	(0)	1030517
42	26.1	1.5	2.9	chr13	45870000	45870135	(68494193)	+	(TCTCCT)n	Simple_repeat	1	138	(0)	1032986
22	17.0	6.4	3.6	chr13	46211849	46211926	(68152402)	+	(GCCTC)n	Simple_repeat	1	83	(0)	1033525
4322	6.7	7.1	3.8	chr13	48031853	48032439	(66331889)	C	LTR14B	LTR/ERVK	(0)	608	1	1036149
1896	9.1	0.0	0.0	chr13	48032445	48032665	(66331663)	C	AluSx1	SINE/Alu	(90)	222	2	1036150
968	18.1	0.0	5.7	chr13	48032667	48032842	(66331486)	C	LTR59	LTR/ERV1	(431)	166	1	1036147
993	19.2	4.5	0.5	chr13	48032843	48033021	(66331307)	C	MLT1A	LTR/ERVL-MaLR	(187)	187	1	1036145
12	15.3	5.3	2.5	chr13	48975985	48976022	(65388306)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	1037665
30	3.1	0.0	0.0	chr13	48976583	48976615	(65387713)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	1037666
982	20.0	0.0	0.0	chr13	49061119	49061273	(65303055)	C	AluJo	SINE/Alu	(21)	291	137	1037773
14	11.8	0.0	10.6	chr13	49061275	49061321	(65303007)	+	(TTTTC)n	Simple_repeat	1	47	(0)	1037774
237	21.5	1.4	0.9	chr13	49061309	49061826	(65302502)	+	(CCTCT)n	Simple_repeat	1	525	(0)	1037775
23	20.5	4.4	4.2	chr13	49220073	49220163	(65144165)	+	G-rich	Low_complexity	1	95	(0)	1037997
14	23.7	1.9	3.6	chr13	49220195	49220248	(65144080)	+	(GCGCA)n	Simple_repeat	1	55	(0)	1037998
2773	24.8	7.6	9.9	chr13	49420998	49422092	(64942236)	+	L1MDa	LINE/L1	89	1155	(5478)	1038363
12	20.7	5.1	0.0	chr13	49792354	49792392	(64571936)	+	(CCCGC)n	Simple_repeat	1	41	(0)	1039047
25	19.0	0.0	1.8	chr13	49792507	49792562	(64571766)	+	(GGC)n	Simple_repeat	1	56	(0)	1039048
22	14.9	2.2	0.0	chr13	49792569	49792613	(64571715)	+	G-rich	Low_complexity	1	46	(0)	1039049
13	27.4	0.0	6.2	chr13	49792664	49792727	(64571601)	+	G-rich	Low_complexity	1	64	(0)	1039049
75	15.5	4.7	4.1	chr13	49996819	49997027	(64367301)	+	G-rich	Low_complexity	1	210	(0)	1039473
14	5.0	0.0	0.0	chr13	50125825	50125845	(64238483)	+	(GGC)n	Simple_repeat	1	21	(0)	1039668
12	23.1	3.7	3.6	chr13	50125846	50125875	(64238453)	+	(CGCGGC)n	Simple_repeat	4	56	(0)	1039669
232	42.0	1.6	7.8	chr13	50274974	50275177	(64089151)	C	L3b	LINE/CR1	(507)	4725	4535	1039883
374	36.6	0.6	1.0	chr13	50275239	50275441	(64088887)	C	Plat_L3	LINE/CR1	(822)	2764	2614	1039884
3680	11.0	0.0	0.0	chr13	50380336	50380807	(63983521)	C	MER4A1	LTR/ERV1	(0)	472	1	1040048
261	29.7	6.8	11.8	chr13	50380927	50381113	(63983215)	C	LTR85b	LTR/Gypsy?	(551)	233	57	1040046
463	34.0	4.0	10.2	chr13	50411061	50411433	(63952895)	C	L2b	LINE/L2	(0)	3375	3027	1040094
1240	24.5	9.7	3.4	chr13	50621141	50621992	(63742336)	C	Charlie11	DNA/hAT-Charlie	(1061)	1135	157	1040388
552	24.5	0.0	3.1	chr13	50622027	50622186	(63742142)	C	MIRb	SINE/MIR	(2)	266	112	1040394
672	23.0	0.0	0.0	chr13	50622189	50622340	(63741988)	+	HAL1M8	LINE/L1	2226	2377	(614)	1040395
510	23.1	0.9	0.0	chr13	50622343	50622450	(63741878)	+	MER81	DNA/hAT-Blackjack	1	109	(5)	1040396
524	19.6	22.3	5.5	chr13	50622453	50622706	(63741622)	+	L1MC5	LINE/L1	8154	8462	(842)	1040397
29	3.2	0.0	0.0	chr13	51451721	51451752	(62912576)	+	(CGC)n	Simple_repeat	1	32	(0)	1041597
25	31.9	0.0	6.5	chr13	51451818	51451970	(62912358)	+	G-rich	Low_complexity	1	153	(0)	1041598
12	22.8	4.2	2.0	chr13	51452232	51452279	(62912049)	+	(GCCC)n	Simple_repeat	1	50	(0)	1041599
13	6.5	8.8	2.7	chr13	51452366	51452399	(62911929)	+	G-rich	Low_complexity	1	37	(0)	1041600
12	31.3	0.0	0.0	chr13	51452554	51452600	(62911728)	+	(GGAGGT)n	Simple_repeat	1	47	(0)	1041601
13	6.5	12.1	0.0	chr13	51452737	51452769	(62911559)	+	(CCTG)n	Simple_repeat	1	37	(0)	1041602
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
2495	7.5	0.0	0.0	chr13	52360777	52361081	(62003247)	+	AluY	SINE/Alu	2	306	(5)	1042978
1809	15.7	4.9	0.7	chr13	52361121	52361414	(62002914)	C	AluJb	SINE/Alu	(4)	308	2	1042979
14	16.5	5.9	3.7	chr13	52406197	52406247	(61958081)	+	(GGCG)n	Simple_repeat	1	54	(0)	1043056
63	0.0	0.0	0.0	chr13	52897652	52897707	(61466621)	+	(CTTT)n	Simple_repeat	1	56	(0)	1043856
2374	8.2	0.7	0.0	chr13	52897708	52898000	(61466328)	C	AluSx4	SINE/Alu	(14)	296	2	1043857
668	11.5	0.9	2.6	chr13	59568059	59568174	(54796154)	+	LTR9B	LTR/ERV1	445	558	(86)	1052279
21	11.2	0.0	0.0	chr13	60397256	60397285	(53967043)	+	(T)n	Simple_repeat	1	30	(0)	1053462
14	7.3	6.9	0.0	chr13	60397311	60397348	(53966980)	+	(CACCCC)n	Simple_repeat	1	40	(0)	1053463
34	17.6	6.6	1.8	chr13	60397601	60397706	(53966622)	+	(GGCGGCG)n	Simple_repeat	1	113	(0)	1053464
5242	9.7	5.1	0.4	chr13	60496809	60497551	(53866777)	C	LTR17	LTR/ERV1	(0)	780	1	1053605
485	28.9	10.0	6.7	chr13	61992781	61993371	(52370957)	C	MLT1H	LTR/ERVL-MaLR	(0)	624	1	1055459
8180	14.2	4.4	8.7	chr13	62045425	62047076	(52317252)	C	LTR12C	LTR/ERV1	(0)	1579	3	1055532
204	41.1	0.0	1.4	chr13	62053964	62054037	(52310291)	C	L2b	LINE/L2	(194)	3181	3109	1055537
781	21.2	6.6	2.9	chr13	62054039	62054213	(52310115)	+	MER5A	DNA/hAT-Charlie	2	183	(6)	1055538
2730	21.3	7.0	1.0	chr13	62137461	62138400	(52225928)	+	LTR28C	LTR/ERV1	1	1067	(62)	1055624
6170	10.1	1.1	1.6	chr13	62179248	62179794	(52184534)	+	L1PA10	LINE/L1	5622	6164	(4)	1055666
1067	20.7	4.7	0.4	chr13	62419520	62419762	(51944566)	C	L1MA7	LINE/L1	(352)	5939	5686	1055982
1357	20.1	2.6	0.7	chr13	62419763	62420068	(51944260)	+	L1MA7	LINE/L1	5975	6286	(5)	1055982
1640	17.1	5.9	1.5	chr13	62687717	62688042	(51676286)	C	MER61A	LTR/ERV1	(0)	341	1	1056311
2261	10.3	0.6	1.0	chr13	63064464	63064774	(51299554)	+	AluSc8	SINE/Alu	2	311	(0)	1056775
42	4.6	4.3	1.4	chr13	63064775	63064810	(51299518)	+	(AAAC)n	Simple_repeat	1	39	(0)	1056776
16	16.8	0.0	0.0	chr13	63065019	63065045	(51299283)	+	(T)n	Simple_repeat	1	27	(0)	1056777
783	28.1	1.4	1.4	chr13	63209500	63209719	(51154609)	+	HERVL40-int	LTR/ERVL	3208	3427	(2103)	1056980
6676	9.0	14.9	2.6	chr13	63426876	63427980	(50936348)	C	MER11A	LTR/ERVK	(1)	1265	1	1057262
6158	6.1	0.3	0.4	chr13	63505208	63505981	(50858347)	C	LTR17	LTR/ERV1	(7)	773	1	1057376
4779	20.6	10.2	5.7	chr13	63511282	63512484	(50851844)	+	LTR2752	LTR/ERV1	1	1263	(0)	1057382
1604	22.6	3.4	1.8	chr13	63647722	63648122	(50716206)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1057551
13422	13.8	6.0	0.9	chr13	63652632	63655885	(50708443)	C	L1PA10	LINE/L1	(1)	6167	2725	1057559
3815	11.8	0.5	1.0	chr13	63738422	63739019	(50625309)	C	HERVE-int	LTR/ERV1	(3970)	3843	3249	1057670
334	33.2	10.6	7.0	chr13	63739378	63739649	(50624679)	+	L1MDa	LINE/L1	423	705	(5928)	1057671
3994	10.7	0.7	1.0	chr13	63739650	63740246	(50624082)	C	HERVE-int	LTR/ERV1	(3970)	3843	3249	1057672
3692	13.2	0.5	0.8	chr13	63740315	63740912	(50623416)	C	HERVE-int	LTR/ERV1	(3969)	3844	3249	1057673
384	33.3	11.4	9.3	chr13	63740994	63742131	(50622197)	+	L1MDa	LINE/L1	403	1004	(5629)	1057671
3974	11.6	0.3	0.7	chr13	63839746	63840345	(50523983)	+	HERVE-int	LTR/ERV1	3249	3846	(3967)	1057796
345	29.9	8.8	16.9	chr13	63840356	63840839	(50523489)	+	L1M4b	LINE/L1	295	735	(6132)	1057797
354	34.0	11.2	10.7	chr13	63840705	63841192	(50523136)	C	L1MDa	LINE/L1	(5661)	972	482	1057798
3859	12.1	0.8	0.7	chr13	63841520	63842116	(50522212)	+	HERVE-int	LTR/ERV1	3249	3846	(3967)	1057799
317	34.4	10.3	8.8	chr13	63842133	63842486	(50521842)	C	L1MDa	LINE/L1	(5787)	846	487	1057800
10996	10.4	0.4	3.3	chr13	65387234	65388861	(48975467)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1059742
400	34.1	10.5	2.0	chr13	65442401	65442694	(48921634)	C	L2b	LINE/L2	(15)	3411	3040	1059823
4678	8.9	2.6	2.1	chr13	65771406	65772412	(48591916)	+	MER11A	LTR/ERVK	1	1265	(1)	1060204
1785	33.1	7.7	0.4	chr13	66020912	66021545	(48342783)	+	L2a	LINE/L2	2204	2885	(534)	1060526
46	0.0	0.0	0.0	chr13	66021546	66021584	(48342744)	+	(AT)n	Simple_repeat	1	39	(0)	1060532
1785	33.1	7.7	0.4	chr13	66021585	66021710	(48342618)	+	L2a	LINE/L2	2886	3024	(395)	1060526
30	2.6	5.0	0.0	chr13	66021720	66021759	(48342569)	+	(CCCTC)n	Simple_repeat	1	42	(0)	1060533
541	29.8	12.3	3.1	chr13	66021769	66022062	(48342266)	+	L2a	LINE/L2	3101	3425	(1)	1060526
72	20.8	3.6	5.0	chr13	66152476	66152727	(48211601)	+	GA-rich	Low_complexity	1	261	(0)	1060683
273	36.7	5.0	5.1	chr13	66152728	66153167	(48211161)	+	L2b	LINE/L2	2871	3305	(82)	1060684
7324	13.3	2.5	0.4	chr13	66684990	66686106	(47678222)	+	THE1C-int	LTR/ERVL-MaLR	491	1631	(0)	1061331
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
8715	12.5	8.6	4.1	chr13	67771971	67773473	(46590855)	C	LTR12C	LTR/ERV1	(0)	1579	3	1062702
491	33.5	9.4	4.8	chr13	67773474	67773905	(46590423)	+	ERVL-int	LTR/ERVL	3505	3952	(1702)	1062701
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
1516	21.3	8.9	3.6	chr13	67915011	67915889	(46448439)	C	SATR1	Satellite	(65)	911	1	1062864
3845	15.8	2.5	3.2	chr13	68024029	68024755	(46339573)	C	MER50	LTR/ERV1	(12)	722	1	1063003
6966	10.5	0.9	0.2	chr13	68107248	68108279	(46256049)	C	LTR12C	LTR/ERV1	(538)	1041	3	1063108
2554	15.1	12.3	4.4	chr13	68270372	68270940	(46093388)	+	LTR29	LTR/ERV1	1	620	(2)	1063324
2386	24.0	10.1	8.4	chr13	68270943	68271596	(46092732)	+	LTR49-int	LTR/ERV1	1	692	(5639)	1063324
51	10.2	3.5	0.0	chr13	68676733	68676819	(45687509)	+	(CCCTC)n	Simple_repeat	1	90	(0)	1063859
16	36.4	5.5	0.9	chr13	68676820	68676838	(45687490)	+	(TTCTCTC)n	Simple_repeat	5	116	(0)	1063860
4433	6.1	0.0	0.0	chr13	69376282	69376841	(44987487)	+	L1PA7	LINE/L1	5593	6152	(2)	1064707
1887	15.2	7.8	4.4	chr13	69376882	69377266	(44987062)	C	LTR1F2	LTR/ERV1	(0)	739	341	1064708
35	6.9	0.0	0.0	chr13	69644359	69644404	(44719924)	+	(TAAATACA)n	Simple_repeat	1	46	(0)	1065041
8921	17.9	0.6	2.6	chr13	69644405	69645519	(44718809)	+	MSTA-int	LTR/ERVL-MaLR	482	1578	(53)	1065039
4411	11.9	2.1	3.9	chr13	69659864	69660883	(44703445)	+	MER11A	LTR/ERVK	1	1266	(0)	1065062
5641	14.5	7.1	6.1	chr13	71298513	71299764	(43064564)	C	MER11A	LTR/ERVK	(0)	1266	1	1067273
15	22.4	0.0	6.8	chr13	71866669	71866727	(42497601)	+	(GAGGTG)n	Simple_repeat	1	59	(0)	1068020
13	26.4	0.0	3.8	chr13	71867035	71867087	(42497241)	+	G-rich	Low_complexity	1	53	(0)	1068021
4611	19.4	1.8	0.3	chr13	72692575	72693422	(41670906)	+	MST-int	LTR/ERVL-MaLR	213	1072	(579)	1069182
209	31.5	6.6	6.6	chr13	73730534	73730730	(40633598)	C	L2c	LINE/L2	(119)	3268	3072	1070994
388	20.9	6.3	15.3	chr13	73835630	73835877	(40528451)	C	MER112	DNA/hAT-Charlie	(0)	261	38	1071157
476	30.0	14.0	1.3	chr13	73878650	73879063	(40485265)	C	L2c	LINE/L2	(199)	3227	2757	1071210
25	26.0	0.0	2.9	chr13	74133820	74133889	(40230439)	+	(CA)n	Simple_repeat	1	70	(0)	1071555
19	12.4	0.0	0.0	chr13	74134159	74134193	(40230135)	+	(TGGGG)n	Simple_repeat	1	35	(0)	1071556
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
25	26.4	3.1	2.0	chr13	74134473	74134570	(40229758)	+	(CCCGC)n	Simple_repeat	1	101	(0)	1071558
226	33.9	1.8	2.6	chr13	74141674	74141788	(40222540)	C	MLT1J	LTR/ERVL-MaLR	(258)	254	141	1071566
285	22.8	1.7	0.0	chr13	74595039	74595095	(39769233)	+	MLT1O	LTR/ERVL-MaLR	140	197	(345)	1072156
40	11.9	0.0	0.0	chr13	74595360	74595424	(39768904)	+	(CCCCT)n	Simple_repeat	1	65	(0)	1072157
2020	13.7	1.8	1.8	chr13	74595452	74595786	(39768542)	C	MER1B	DNA/hAT-Charlie	(0)	339	5	1072158
895	18.9	3.0	0.0	chr13	74696197	74696355	(39667973)	C	AluJo	SINE/Alu	(12)	300	137	1072291
18	14.7	0.0	0.0	chr13	74696577	74696606	(39667722)	+	(T)n	Simple_repeat	1	30	(0)	1072292
5114	13.7	26.2	0.8	chr13	74945144	74945504	(39418824)	+	L1MA3	LINE/L1	3048	3498	(4067)	1072629
17245	13.7	3.3	0.8	chr13	74945691	74949855	(39414473)	+	L1MA3	LINE/L1	3464	7724	(0)	1072629
7250	7.5	13.9	1.1	chr13	75183162	75184263	(39180065)	+	MER11A	LTR/ERVK	1	1266	(0)	1072947
3382	14.2	3.3	1.2	chr13	75184264	75184800	(39179528)	+	LTR26	LTR/ERV1	51	603	(0)	1072946
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
4098	14.3	2.1	1.7	chr13	76814489	76814678	(37549650)	C	L1PA17	LINE/L1	(6)	6160	5971	1075267
2432	6.4	0.4	0.0	chr13	76814679	76814983	(37549345)	C	AluY	SINE/Alu	(0)	311	1	1075268
140	22.6	5.0	2.7	chr13	76827881	76827897	(37536431)	+	GA-rich	Low_complexity	1	152	(332)	1075292
144	15.9	6.8	3.2	chr13	76827898	76828308	(37536020)	+	G-rich	Low_complexity	1	439	(0)	1075293
140	22.6	5.0	2.7	chr13	76828309	76828341	(37535987)	+	GA-rich	Low_complexity	153	484	(0)	1075292
34	6.7	2.1	0.0	chr13	76886255	76886302	(37478026)	+	(CGC)n	Simple_repeat	1	49	(0)	1075376
12	15.5	3.5	0.0	chr13	76886311	76886339	(37477989)	+	(GAGCG)n	Simple_repeat	1	30	(0)	1075377
2474	8.6	0.0	2.7	chr13	76927092	76927461	(37436867)	+	L1PA8	LINE/L1	5812	6171	(1)	1075446
568	21.3	1.4	2.9	chr13	76930234	76930373	(37433955)	+	PrimLTR79	LTR/ERV1	366	503	(0)	1075453
10310	13.9	0.8	1.8	chr13	76930374	76931716	(37432612)	C	Tigger2	DNA/TcMar-Tigger	(519)	2199	863	1075447
1215	6.7	0.0	0.0	chr13	76979902	76980051	(37384277)	+	L1PA8	LINE/L1	6007	6156	(16)	1075543
26	0.0	0.0	3.3	chr13	76980053	76980082	(37384246)	+	(AAAAT)n	Simple_repeat	1	30	(0)	1075544
28	26.9	2.1	1.0	chr13	77026662	77026756	(37337572)	+	(CCGCC)n	Simple_repeat	1	97	(0)	1075600
16	4.3	0.0	3.9	chr13	77329420	77329445	(37034883)	+	(CTC)n	Simple_repeat	1	26	(0)	1076038
1715	9.5	0.0	0.0	chr13	77659666	77659876	(36704452)	C	AluSc	SINE/Alu	(26)	283	73	1076533
1709	17.9	4.4	21.5	chr13	77659981	77661320	(36703008)	C	SVA_A	Retroposon/SVA	(515)	872	421	1076534
14	16.9	0.0	2.9	chr13	77697539	77697573	(36666755)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	1076566
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
4371	14.8	1.1	5.6	chr13	78683629	78684392	(35679936)	+	LTR1F1	LTR/ERV1	1	729	(0)	1077884
3198	18.2	1.4	1.4	chr13	78684393	78684900	(35679428)	+	MER34D	LTR/ERV1	68	573	(6)	1077883
2270	13.9	3.4	2.1	chr13	78802545	78802920	(35561408)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1078058
261	28.2	0.0	0.0	chr13	79225161	79225231	(35139097)	+	LTR88c	LTR/Gypsy?	3	73	(789)	1078633
19	26.2	0.0	3.0	chr13	79405803	79405869	(34958459)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	1078870
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
12	10.0	0.0	0.0	chr13	79481945	79481966	(34882362)	+	(GGGT)n	Simple_repeat	1	22	(0)	1079008
250	32.0	18.0	1.7	chr13	79589289	79589460	(34774868)	+	MIRc	SINE/MIR	46	251	(17)	1079160
6225	15.2	1.7	3.4	chr13	79612457	79613508	(34750820)	C	THE1B-int	LTR/ERVL-MaLR	(595)	1036	3	1079191
21744	13.1	1.7	1.6	chr13	80088491	80094295	(34270033)	C	L1PA10	LINE/L1	(385)	5968	192	1079758
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
261	35.2	3.2	0.0	chr13	80502410	80502500	(33861828)	+	MIRb	SINE/MIR	13	106	(162)	1080419
2226	22.4	4.4	2.4	chr13	80502501	80503080	(33861248)	+	MLT2B4	LTR/ERVL	1	552	(2)	1080420
4124	10.1	0.3	1.2	chr13	80704785	80705387	(33658941)	+	HERVE-int	LTR/ERV1	3249	3846	(3967)	1080626
416	34.0	8.9	7.9	chr13	80705457	80705923	(33658405)	C	L1MDa	LINE/L1	(5689)	944	409	1080627
4034	11.6	0.2	0.8	chr13	80706438	80707039	(33657289)	+	HERVE-int	LTR/ERV1	3249	3846	(3967)	1080628
6824	6.6	20.2	0.1	chr13	82607924	82608934	(31755394)	+	MER11A	LTR/ERVK	1	1266	(0)	1082983
10219	13.6	1.8	0.6	chr13	82881639	82883247	(31481081)	+	THE1D-int	LTR/ERVL-MaLR	2	1631	(0)	1083313
1961	13.5	5.6	1.1	chr13	82883250	82883609	(31480719)	+	THE1D	LTR/ERVL-MaLR	5	381	(0)	1083313
2075	12.2	5.2	3.1	chr13	84823140	84823495	(29540833)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1085737
520	31.3	13.0	4.9	chr13	84948038	84948612	(29415716)	C	L2	LINE/L2	(996)	2423	1795	1085900
2539	14.3	7.7	0.2	chr13	84948665	84949112	(29415216)	+	LOR1a	LTR/ERV1	1	484	(13)	1085901
2304	12.3	1.6	2.7	chr13	85139967	85140334	(29223994)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1086148
8117	22.6	1.7	1.1	chr13	85399929	85401704	(28962624)	C	L1PA12	LINE/L1	(5038)	2565	7	1086499
2661	33.8	4.3	3.4	chr13	87351842	87353509	(27010819)	C	PABL_B-int	LTR/ERV1	(2917)	4205	2521	1088907
2195	11.8	1.4	0.6	chr13	88119778	88120128	(26244200)	C	THE1A	LTR/ERVL-MaLR	(0)	355	2	1089921
1071	17.8	0.9	3.2	chr13	88120129	88120223	(26244105)	C	L1PA16	LINE/L1	(123)	6043	5950	1089920
2166	12.0	0.0	1.3	chr13	88456679	88456978	(25907350)	+	AluSg	SINE/Alu	7	302	(8)	1090342
17183	9.8	1.6	2.4	chr13	88515146	88518290	(25846038)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	1090417
544	28.5	10.1	2.7	chr13	89173834	89174089	(25190239)	C	L1MC4a	LINE/L1	(1738)	6144	5868	1091265
35	36.3	2.4	1.2	chr13	89174114	89174277	(25190051)	+	(CCTTT)n	Simple_repeat	1	168	(0)	1091266
5760	7.1	0.8	4.4	chr13	89611741	89612550	(24751778)	C	LTR17	LTR/ERV1	(0)	780	1	1091845
4691	12.7	2.3	0.7	chr13	90912654	90913390	(23450938)	C	L1PA16	LINE/L1	(9)	6157	5409	1093531
12	17.3	0.0	5.6	chr13	91348161	91348196	(23016132)	+	GA-rich	Low_complexity	1	36	(0)	1094134
16	17.8	1.7	6.8	chr13	91348197	91348215	(23016113)	+	(GGCGG)n	Simple_repeat	4	59	(0)	1094135
13	0.0	0.0	0.0	chr13	91348412	91348428	(23015900)	+	(GCG)n	Simple_repeat	1	17	(0)	1094136
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
2176	17.9	7.4	3.5	chr13	91394580	91395088	(22969240)	C	LTR53B	LTR/ERVL	(3)	530	1	1094188
269	25.0	2.6	3.8	chr13	91774364	91774442	(22589886)	C	L2a	LINE/L2	(1)	3425	3348	1094726
756	25.8	14.8	3.4	chr13	91774578	91774958	(22589370)	+	LTR16A1	LTR/ERVL	21	452	(4)	1094727
6118	4.5	3.0	0.3	chr13	93206518	93207276	(21157052)	+	LTR17	LTR/ERV1	1	780	(0)	1096582
11	15.8	6.7	2.1	chr13	93207277	93207312	(21157016)	+	(TATAATAT)n	Simple_repeat	1	38	(0)	1096583
17	16.4	3.6	1.2	chr13	93502191	93502239	(20862089)	+	A-rich	Low_complexity	1	50	(0)	1096968
36	19.9	0.0	0.0	chr13	93502247	93502316	(20862012)	+	GA-rich	Low_complexity	1	70	(0)	1096969
3118	18.7	5.8	0.6	chr13	93502317	93502955	(20861373)	C	MER63C	DNA/hAT-Blackjack	(83)	847	174	1096970
31	0.0	0.0	0.0	chr13	94271383	94271409	(20092919)	+	(CA)n	Simple_repeat	1	27	(0)	1098059
492	27.7	4.0	2.4	chr13	94271521	94271690	(20092638)	+	MIR	SINE/MIR	69	241	(21)	1098060
27	21.9	2.5	2.4	chr13	94271708	94271787	(20092541)	+	(TCTCTC)n	Simple_repeat	1	82	(0)	1098061
13	4.3	3.9	3.7	chr13	95301318	95301343	(19062985)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1099755
2481	12.3	5.7	5.0	chr13	95728666	95729168	(18635160)	C	L1PA2	LINE/L1	(4)	7001	6495	1100601
33	3.1	0.0	0.0	chr13	95729182	95729214	(18635114)	+	(TC)n	Simple_repeat	1	33	(0)	1100602
124	11.6	0.0	0.0	chr13	95729217	95729404	(18634924)	+	(TCCCTC)n	Simple_repeat	1	188	(0)	1100603
12663	12.3	3.8	1.1	chr13	95729420	95730008	(18634320)	C	L1PA2	LINE/L1	(403)	6488	5871	1100601
15	17.7	2.5	2.4	chr13	97976476	97976515	(16387813)	+	(GGC)n	Simple_repeat	1	41	(0)	1103822
13	16.2	2.0	8.0	chr13	97976865	97976913	(16387415)	+	(CGGC)n	Simple_repeat	1	50	(0)	1103823
732	19.2	14.1	4.4	chr13	98063230	98063619	(16300709)	C	LTR54B	LTR/ERV1	(6)	492	26	1103997
27	5.1	0.0	4.4	chr13	98063631	98063675	(16300653)	+	(CTCCC)n	Simple_repeat	1	45	(0)	1103998
17	10.8	7.5	0.0	chr13	98142939	98142978	(16221350)	+	(CGGAG)n	Simple_repeat	1	43	(0)	1104174
15	19.9	4.8	4.5	chr13	98143122	98143184	(16221144)	+	(GGCGG)n	Simple_repeat	1	66	(0)	1104175
763	16.7	0.7	2.8	chr13	98198451	98198592	(16165736)	+	AluJb	SINE/Alu	1	139	(173)	1104281
1953	14.7	0.0	0.3	chr13	98198595	98198879	(16165449)	+	AluSz	SINE/Alu	1	284	(28)	1104282
17	5.9	2.4	7.1	chr13	98198886	98198926	(16165402)	+	(CCCTCC)n	Simple_repeat	1	42	(0)	1104283
458	19.8	1.1	0.0	chr13	98198937	98199022	(16165306)	+	AluJb	SINE/Alu	141	227	(85)	1104281
14	16.6	3.6	7.0	chr13	98577322	98577376	(15786952)	+	(GCGG)n	Simple_repeat	1	57	(0)	1104832
1651	20.6	0.7	1.7	chr13	98625994	98626294	(15738034)	+	AluJr4	SINE/Alu	1	298	(14)	1104944
61	19.1	3.7	2.4	chr13	98626297	98626457	(15737871)	+	GA-rich	Low_complexity	1	167	(0)	1104945
1541	24.9	1.6	1.1	chr13	98626466	98626839	(15737489)	+	Kanga1c	DNA/TcMar-Tc2	351	726	(3)	1104946
1985	8.9	9.1	0.0	chr13	98729941	98730209	(15634119)	+	AluSz	SINE/Alu	1	296	(16)	1105165
32	22.2	1.8	4.5	chr13	99606510	99606661	(14757667)	+	G-rich	Low_complexity	1	147	(0)	1106537
14	21.8	6.8	3.8	chr13	99606673	99606758	(14757570)	+	(GGC)n	Simple_repeat	1	88	(0)	1106538
1145	19.1	20.8	2.1	chr13	99607112	99607534	(14756794)	C	Charlie1b	DNA/hAT-Charlie	(0)	523	1	1106539
12	9.9	2.6	7.7	chr13	99972059	99972096	(14392232)	+	G-rich	Low_complexity	1	39	(0)	1107129
18	20.9	3.0	4.4	chr13	99980757	99980822	(14383506)	+	GA-rich	Low_complexity	1	68	(0)	1107132
25	22.4	1.3	3.8	chr13	99981084	99981162	(14383166)	+	(CCTCCC)n	Simple_repeat	1	80	(0)	1107133
11	17.0	2.9	2.8	chr13	99981243	99981277	(14383051)	+	(CGAGGC)n	Simple_repeat	1	36	(0)	1107134
21	24.0	4.0	1.3	chr13	99981545	99981619	(14382709)	+	(GCGCGT)n	Simple_repeat	1	78	(0)	1107135
16	31.2	2.9	1.4	chr13	99981581	99981649	(14382679)	+	(GC)n	Simple_repeat	1	71	(0)	1107136
20	18.4	1.2	8.6	chr13	99981660	99981739	(14382589)	+	(CCTC)n	Simple_repeat	1	81	(0)	1107137
14	17.3	5.1	0.0	chr13	99981706	99981744	(14382584)	+	(CCCGC)n	Simple_repeat	1	41	(0)	1107138
35	13.9	1.6	0.0	chr13	99981789	99981851	(14382477)	+	(CTC)n	Simple_repeat	1	64	(0)	1107139
14	14.2	0.0	5.7	chr13	99981891	99981925	(14382403)	+	(GGC)n	Simple_repeat	1	35	(0)	1107140
14	12.7	0.0	0.0	chr13	99982137	99982162	(14382166)	+	(GCG)n	Simple_repeat	1	26	(0)	1107141
33	9.9	1.9	0.0	chr13	99990841	99990894	(14373434)	+	(CA)n	Simple_repeat	1	55	(0)	1107149
1553	23.6	5.4	1.4	chr13	100274420	100274862	(14089466)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	1107708
369	29.2	12.2	9.5	chr13	100274967	100275261	(14089067)	C	L1MCc	LINE/L1	(5123)	1300	997	1107709
2798	15.5	8.4	2.6	chr13	100579317	100579919	(13784409)	+	MER39	LTR/ERV1	67	707	(0)	1108169
912	24.3	7.3	4.9	chr13	100580177	100580614	(13783714)	+	MLT1C	LTR/ERVL-MaLR	8	467	(0)	1108170
13	7.8	3.5	3.3	chr13	106475229	106475257	(7889071)	+	(CCTC)n	Simple_repeat	1	30	(0)	1116142
12	22.4	3.1	6.1	chr13	109786754	109786817	(4577511)	+	(CGCCCC)n	Simple_repeat	1	66	(0)	1120506
12	24.2	2.6	0.0	chr13	109786820	109786858	(4577470)	+	G-rich	Low_complexity	1	40	(0)	1120507
23	18.2	4.0	3.9	chr13	109787005	109787078	(4577250)	+	G-rich	Low_complexity	1	77	(0)	1120508
23	13.4	0.0	5.5	chr13	109787179	109787233	(4577095)	+	(CCCCGT)n	Simple_repeat	1	55	(0)	1120509
180	33.3	2.5	0.0	chr13	110702353	110702430	(3661898)	+	MIRb	SINE/MIR	103	182	(86)	1121620
19	30.8	3.0	4.4	chr13	112056342	112056472	(2307856)	+	G-rich	Low_complexity	1	135	(0)	1123114
12	21.4	3.9	3.7	chr13	112057387	112057438	(2306890)	+	(CCGCCC)n	Simple_repeat	1	54	(0)	1123117
26	10.9	4.6	4.4	chr13	112072661	112072725	(2291603)	+	(CTCC)n	Simple_repeat	1	68	(0)	1123134
213	22.7	6.2	5.1	chr13	112185222	112185300	(2179028)	+	MIRb	SINE/MIR	64	143	(125)	1123251
229	27.0	18.0	2.9	chr13	112185304	112185406	(2178922)	+	MLT1G3	LTR/ERVL-MaLR	1	122	(473)	1123252
871	27.2	8.6	0.8	chr13	112185557	112185855	(2178473)	+	MLT1G3	LTR/ERVL-MaLR	184	515	(80)	1123252
38	19.0	3.8	5.1	chr13	112894203	112894334	(1469994)	+	(CGCCC)n	Simple_repeat	1	137	(0)	1124019
15	22.8	0.0	0.0	chr13	112969167	112969207	(1395121)	+	(CCGCCCC)n	Simple_repeat	1	41	(0)	1124105
13	27.9	2.1	0.0	chr13	113209255	113209302	(1155026)	+	(GGAGCCC)n	Simple_repeat	1	49	(0)	1124329
47	18.6	5.0	2.7	chr13	113209474	113209614	(1154714)	+	G-rich	Low_complexity	1	148	(0)	1124330
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
608	21.1	5.6	0.0	chr13	113371904	113372055	(992273)	C	MLT1B	LTR/ERVL-MaLR	(124)	266	106	1124597
2605	4.2	0.3	0.3	chr13	113372064	113372411	(991917)	C	AluYa5	SINE/Alu	(0)	311	1	1124598
1166	14.3	1.2	0.0	chr13	113475605	113475772	(888556)	+	AluJr	SINE/Alu	1	170	(142)	1124741
440	35.0	5.2	0.4	chr13	113476018	113476292	(888036)	C	L1ME3B	LINE/L1	(375)	5867	5579	1124742
30	10.5	0.0	0.0	chr13	113759536	113759586	(604742)	+	(CTGTCT)n	Simple_repeat	1	51	(0)	1125004
331	18.7	2.6	2.5	chr13	113836170	113836951	(527377)	+	GA-rich	Low_complexity	1	802	(0)	1125051
412	26.7	31.7	3.0	chr13	113883029	113883295	(481033)	C	L1MC5	LINE/L1	(756)	8548	8204	1125082
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
12	15.8	0.0	3.3	chr13	114281551	114281580	(82748)	+	G-rich	Low_complexity	1	30	(0)	1125453
20	5.5	7.9	0.0	chr13	114281896	114281934	(82394)	+	(GAGGG)n	Simple_repeat	1	42	(0)	1125454
103	20.9	2.4	5.4	chr14	20495478	20495805	(86547913)	+	(TTCCT)n	Simple_repeat	1	336	(0)	1128147
559	23.2	0.0	10.4	chr14	20495811	20495993	(86547725)	C	L1MC5a	LINE/L1	(11)	2766	2603	1128148
3953	21.9	6.8	8.6	chr14	21191757	21191933	(85851785)	+	L1ME3	LINE/L1	961	1130	(5503)	1129250
6733	20.8	9.8	3.7	chr14	21191934	21193578	(85850140)	+	MER52A	LTR/ERV1	1	1755	(0)	1129252
13	11.2	0.0	6.1	chr14	21432029	21432061	(85611657)	+	A-rich	Low_complexity	1	33	(0)	1129739
14	19.7	4.2	2.0	chr14	22070126	22070173	(84973545)	+	(ATATATA)n	Simple_repeat	1	50	(0)	1130699
15	16.9	4.0	3.9	chr14	23183710	23183759	(83859959)	+	(CCCTCCT)n	Simple_repeat	1	52	(0)	1132424
1935	15.9	0.0	1.0	chr14	23539990	23540290	(83503428)	C	AluJb	SINE/Alu	(14)	298	1	1133007
12	13.9	6.2	0.0	chr14	23551460	23551491	(83492227)	+	(CCCT)n	Simple_repeat	1	34	(0)	1133022
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
238	32.7	14.2	0.8	chr14	24197164	24197413	(82846305)	+	L2c	LINE/L2	2528	2816	(603)	1133887
2147	9.9	1.4	1.0	chr14	24197479	24197770	(82845948)	+	AluSp	SINE/Alu	1	293	(20)	1133888
17	19.0	1.6	6.5	chr14	24369166	24369226	(82674492)	+	(CCCCAG)n	Simple_repeat	1	62	(0)	1134159
12	5.5	0.0	0.0	chr14	26596957	26596975	(80446743)	+	(TCC)n	Simple_repeat	1	19	(0)	1136999
35	17.1	1.2	3.5	chr14	26597201	26597284	(80446434)	+	G-rich	Low_complexity	1	85	(0)	1137000
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
27	22.9	0.9	7.1	chr14	26598275	26598385	(80445333)	+	G-rich	Low_complexity	1	112	(0)	1137004
17	20.6	0.0	0.0	chr14	28635634	28635667	(78408051)	+	(T)n	Simple_repeat	1	34	(0)	1139486
24422	7.6	0.3	0.1	chr14	28635671	28641795	(78401923)	C	L1PA7	LINE/L1	(3)	6466	326	1139487
14	24.3	1.5	6.1	chr14	28766590	28766596	(78277122)	+	(GCGG)n	Simple_repeat	1	61	(0)	1139686
12	21.8	1.9	5.6	chr14	28766597	28766649	(78277069)	+	G-rich	Low_complexity	1	54	(0)	1139687
1447	14.6	4.4	0.0	chr14	29016076	29016388	(78027330)	C	MLT2C2	LTR/ERVL	(50)	347	1	1139998
681	20.3	1.4	0.0	chr14	29016529	29016671	(78027047)	+	MER5A1	DNA/hAT-Charlie	6	150	(16)	1139999
271	31.5	6.5	5.3	chr14	29506336	29506420	(77537298)	+	Mam_R4	LINE/Dong-R4	1517	1606	(2203)	1140583
6634	9.6	15.2	0.8	chr14	29506421	29507503	(77536215)	C	MER11A	LTR/ERVK	(0)	1266	1	1140584
1084	16.5	5.8	8.8	chr14	29763078	29763326	(77280392)	+	AluJr	SINE/Alu	72	312	(0)	1140954
54	5.0	0.0	0.0	chr14	29763327	29763388	(77280330)	+	(GAAG)n	Simple_repeat	1	62	(0)	1140955
47	13.7	5.2	3.3	chr14	29763389	29763504	(77280214)	+	G-rich	Low_complexity	1	122	(0)	1140956
1934	15.4	0.0	1.0	chr14	31196017	31196315	(75847403)	C	AluSz	SINE/Alu	(15)	297	2	1143125
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
1262	26.5	8.3	0.9	chr14	31927544	31928095	(75115623)	+	L2a	LINE/L2	2813	3426	(0)	1144379
17	18.7	1.9	3.8	chr14	32076735	32076786	(74966932)	+	G-rich	Low_complexity	1	53	(0)	1144636
13	21.7	0.0	7.3	chr14	32076958	32077012	(74966706)	+	(CGCGC)n	Simple_repeat	1	55	(0)	1144637
13	21.4	2.1	4.2	chr14	32077304	32077356	(74966362)	+	GA-rich	Low_complexity	1	51	(0)	1144640
15	17.7	0.0	0.0	chr14	32077370	32077401	(74966317)	+	(CGC)n	Simple_repeat	1	32	(0)	1144641
35	0.0	0.0	0.0	chr14	32934320	32934349	(74109369)	+	(GT)n	Simple_repeat	1	30	(0)	1145775
23	8.8	3.7	5.4	chr14	32934774	32934827	(74108891)	+	(GCCCGA)n	Simple_repeat	1	56	(0)	1145776
23	26.6	2.1	3.1	chr14	32939778	32939872	(74103846)	+	G-rich	Low_complexity	1	97	(0)	1145784
1939	16.4	1.0	1.9	chr14	34026846	34027156	(73016562)	+	AluJb	SINE/Alu	5	312	(0)	1147104
153	17.8	6.3	2.4	chr14	34027169	34027599	(73016119)	+	G-rich	Low_complexity	1	458	(0)	1147105
2445	14.5	0.0	0.0	chr14	34027600	34027964	(73015754)	C	Tigger1	DNA/TcMar-Tigger	(1658)	760	396	1147106
12	22.8	0.0	7.5	chr14	34060123	34060175	(72983543)	+	(GGCGC)n	Simple_repeat	1	53	(0)	1147172
6942	7.7	16.8	6.9	chr14	34280940	34281289	(72762429)	C	MER11A	LTR/ERVK	(0)	1266	954	1147508
2574	8.4	0.0	0.0	chr14	34281290	34281587	(72762131)	+	AluY	SINE/Alu	1	298	(13)	1147509
12	21.5	8.2	1.5	chr14	34714282	34714342	(72329376)	+	(GCCCCG)n	Simple_repeat	1	66	(0)	1148492
15	19.5	0.0	0.0	chr14	34714549	34714583	(72329135)	+	(CGGCTG)n	Simple_repeat	1	35	(0)	1148493
13	17.6	0.0	2.9	chr14	34873685	34873718	(72170000)	+	(CCCTTC)n	Simple_repeat	1	34	(0)	1148820
13	15.9	0.0	0.0	chr14	34874153	34874180	(72169538)	+	G-rich	Low_complexity	1	28	(0)	1148821
7706	9.2	1.1	0.2	chr14	35033780	35034802	(72008916)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	549	1149213
1915	9.8	0.4	0.4	chr14	35034803	35035048	(72008670)	C	AluSp	SINE/Alu	(18)	295	50	1149214
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
18	8.1	0.0	3.6	chr14	36519724	36519751	(70523967)	+	(AG)n	Simple_repeat	1	28	(0)	1151705
20	17.7	4.3	4.2	chr14	36519819	36519887	(70523831)	+	G-rich	Low_complexity	1	72	(0)	1151706
15	22.1	2.4	0.0	chr14	36520203	36520244	(70523474)	+	(CTGT)n	Simple_repeat	1	43	(0)	1151707
16	5.2	0.0	0.0	chr14	36520441	36520460	(70523258)	+	(C)n	Simple_repeat	1	20	(0)	1151708
13	19.9	3.7	8.3	chr14	36647371	36647451	(70396267)	+	(GCCTGGC)n	Simple_repeat	1	84	(0)	1151888
12	3.5	13.3	0.0	chr14	36657019	36657048	(70386670)	+	(CCTACC)n	Simple_repeat	1	34	(0)	1151893
223	31.0	0.0	0.0	chr14	36877482	36877539	(70166179)	C	L2c	LINE/L2	(0)	3387	3330	1152174
11	21.2	1.5	9.1	chr14	36877699	36877763	(70165955)	+	(AGCAAGA)n	Simple_repeat	1	66	(0)	1152175
499	36.6	4.0	3.9	chr14	36930370	36931051	(70112667)	+	L2c	LINE/L2	2529	3202	(185)	1152240
193	24.4	0.0	0.0	chr14	36931136	36931180	(70112538)	+	L2c	LINE/L2	3378	3422	(4)	1152240
4673	8.7	1.4	4.2	chr14	37105901	37106943	(69936775)	+	MER11A	LTR/ERVK	1	1266	(0)	1152489
1337	30.1	9.8	8.8	chr14	37292781	37293246	(69750472)	C	HAL1b	LINE/L1	(1806)	615	151	1152790
26428	4.8	0.5	0.0	chr14	37293329	37299451	(69744267)	+	L1PA4	LINE/L1	180	6327	(1)	1152806
367	36.8	3.7	0.0	chr14	39212497	39212678	(67831040)	+	L3	LINE/CR1	3892	4080	(19)	1155360
28	0.0	0.0	0.0	chr14	45141464	45141490	(61902228)	+	(CTCCC)n	Simple_repeat	1	27	(0)	1162721
24	20.1	0.0	5.6	chr14	45141505	45141580	(61902138)	+	(CCCTT)n	Simple_repeat	1	71	(0)	1162722
2360	10.1	1.0	0.0	chr14	45141581	45141888	(61901830)	C	AluSq2	SINE/Alu	(2)	311	1	1162723
346	25.3	0.0	0.0	chr14	45634198	45634272	(61409446)	+	AmnSINE1	SINE/5S-Deu-L2	306	380	(195)	1163372
48	9.5	2.4	1.2	chr14	45634400	45634481	(61409237)	+	(CCCTCT)n	Simple_repeat	1	84	(0)	1163373
7262	6.7	0.1	29.8	chr14	45634483	45636455	(61407263)	+	SVA_A	Retroposon/SVA	1	1387	(0)	1163374
6377	8.6	16.8	2.7	chr14	46659385	46660466	(60383252)	C	MER11A	LTR/ERVK	(0)	1266	1	1164561
16	16.9	0.0	0.0	chr14	49892575	49892601	(57151117)	+	A-rich	Low_complexity	1	27	(0)	1168853
248	27.4	11.3	1.0	chr14	50311713	50311815	(56731903)	C	MIRb	SINE/MIR	(136)	132	18	1169747
17	4.3	0.0	0.0	chr14	50312360	50312383	(56731335)	+	(CTCC)n	Simple_repeat	1	24	(0)	1169748
19	11.5	2.6	0.0	chr14	50560764	50560801	(56482917)	+	(GGGCGGC)n	Simple_repeat	1	39	(0)	1170157
2475	10.6	0.0	0.0	chr14	50672426	50672726	(56370992)	+	AluSx	SINE/Alu	1	301	(11)	1170330
2481	4.5	0.0	1.0	chr14	51775823	51776105	(55267613)	C	AluY	SINE/Alu	(29)	282	1	1171956
15	22.0	2.0	2.0	chr14	52695751	52695799	(54347919)	+	(CCCCG)n	Simple_repeat	1	50	(0)	1173340
20	17.5	0.0	2.1	chr14	52695949	52695995	(54347723)	+	(CCCGC)n	Simple_repeat	1	47	(0)	1173341
37	17.0	1.2	2.4	chr14	52951228	52951310	(54092408)	+	G-rich	Low_complexity	1	84	(0)	1173829
6057	5.5	3.0	0.3	chr14	53107750	53108508	(53935210)	+	LTR17	LTR/ERV1	1	780	(0)	1174058
1293	23.2	6.8	2.6	chr14	54869824	54870204	(52173514)	+	L1ME1	LINE/L1	5779	6176	(3)	1176582
815	20.7	0.0	0.0	chr14	54870216	54870350	(52173368)	+	FLAM_C	SINE/Alu	1	135	(8)	1176583
25990	5.0	0.7	0.8	chr14	54870365	54876505	(52167213)	+	L1PA4	LINE/L1	1	6155	(0)	1176584
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
14	4.3	4.2	0.0	chr14	56118335	56118358	(50925360)	+	(CTCC)n	Simple_repeat	1	25	(0)	1178822
13	15.1	5.1	2.4	chr14	57268730	57268768	(49774950)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1180525
13	31.1	1.2	4.8	chr14	57390736	57390817	(49652901)	+	G-rich	Low_complexity	1	83	(0)	1180687
13	24.4	0.0	4.3	chr14	57391075	57391121	(49652597)	+	GA-rich	Low_complexity	1	47	(0)	1180688
13	16.4	0.0	10.0	chr14	57391105	57391154	(49652564)	+	(GGC)n	Simple_repeat	1	50	(0)	1180689
13	13.2	0.0	0.0	chr14	57391183	57391207	(49652511)	+	(CAG)n	Simple_repeat	1	25	(0)	1180690
17	14.2	0.0	0.0	chr14	57391477	57391507	(49652211)	+	(GAG)n	Simple_repeat	1	31	(0)	1180691
13	27.9	0.0	0.0	chr14	58298863	58298905	(48744813)	+	(CAGCCG)n	Simple_repeat	1	43	(0)	1182004
27	14.2	0.0	7.0	chr14	58299143	58299213	(48744505)	+	(CTCCC)n	Simple_repeat	1	71	(0)	1182005
313	27.9	4.9	1.4	chr14	58395685	58395822	(48647896)	+	MIRb	SINE/MIR	1	143	(125)	1182162
18	21.1	0.0	3.8	chr14	58396108	58396160	(48647558)	+	(GGCG)n	Simple_repeat	1	53	(0)	1182163
19	16.5	4.4	5.6	chr14	58637753	58637820	(48405898)	+	GA-rich	Low_complexity	1	71	(0)	1182574
13	20.5	5.8	1.8	chr14	58638246	58638297	(48405421)	+	(CGGCGCG)n	Simple_repeat	1	55	(0)	1182575
21	22.7	2.9	2.8	chr14	59870814	59870883	(47172835)	+	(CTC)n	Simple_repeat	1	72	(0)	1184293
13	24.6	3.5	3.4	chr14	59870849	59870905	(47172813)	+	(GCT)n	Simple_repeat	1	59	(0)	1184294
18	12.1	6.6	6.2	chr14	60249684	60249744	(46793974)	+	(GCG)n	Simple_repeat	1	65	(0)	1184790
17	25.0	3.2	1.5	chr14	60249844	60249934	(46793784)	+	(GGCGGT)n	Simple_repeat	1	92	(0)	1184791
12	19.3	0.0	10.3	chr14	61695436	61695493	(45348225)	+	(CCCTCC)n	Simple_repeat	1	58	(0)	1186912
15	25.1	4.9	0.0	chr14	63852902	63852962	(43190756)	+	G-rich	Low_complexity	1	64	(0)	1190225
15	31.8	0.0	0.0	chr14	63853205	63853262	(43190456)	+	G-rich	Low_complexity	1	58	(0)	1190226
17	18.5	0.0	0.0	chr14	63854164	63854194	(43189524)	+	(T)n	Simple_repeat	1	31	(0)	1190227
1682	16.9	0.6	5.2	chr14	64340750	64341079	(42702639)	+	LTR10B	LTR/ERV1	191	505	(0)	1191082
354	25.8	0.0	6.1	chr14	64341086	64341148	(42702570)	C	L1M5	LINE/L1	(533)	5640	5579	1191080
21	20.1	3.0	2.9	chr14	64465366	64465431	(42578287)	+	(CCCCG)n	Simple_repeat	1	68	(0)	1191351
13	14.2	3.2	0.0	chr14	65102374	65102404	(41941314)	+	GA-rich	Low_complexity	1	32	(0)	1192406
27	6.0	0.0	0.0	chr14	65102446	65102480	(41941238)	+	(CACT)n	Simple_repeat	1	35	(0)	1192407
17	0.0	4.2	0.0	chr14	65102481	65102495	(41941223)	+	(CA)n	Simple_repeat	1	16	(0)	1192408
15	18.6	0.0	8.6	chr14	66508442	66508499	(40535219)	+	(CTCCCGG)n	Simple_repeat	1	58	(0)	1194714
22714	9.5	1.6	0.5	chr14	66872985	66879366	(40164352)	+	L1PA7	LINE/L1	8	6469	(0)	1195154
3567	18.2	5.8	7.5	chr14	66944231	66945086	(40098632)	C	MER61-int	LTR/ERV1	(4376)	841	1	1195227
1382	18.3	0.6	4.1	chr14	66945098	66945419	(40098299)	C	MER61B	LTR/ERV1	(29)	398	1	1195227
1417	9.0	0.0	2.3	chr14	66945421	66945636	(40098082)	+	L1PB1	LINE/L1	5940	6150	(1)	1195229
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
12	3.8	6.5	6.1	chr14	68793489	68793519	(38250199)	+	(GTT)n	Simple_repeat	1	33	(0)	1198273
740	12.5	8.2	3.9	chr14	68974301	68974428	(38069290)	+	AluJr4	SINE/Alu	2	135	(177)	1198585
22	0.0	3.3	3.2	chr14	68974546	68974575	(38069143)	+	(AC)n	Simple_repeat	1	31	(0)	1198586
11	11.2	6.9	0.0	chr14	68979327	68979355	(38064363)	+	G-rich	Low_complexity	1	31	(0)	1198598
21	16.4	3.5	3.3	chr14	69152986	69153043	(37890675)	+	(CCG)n	Simple_repeat	1	60	(0)	1198957
257	24.0	13.0	2.9	chr14	69287274	69287376	(37756342)	+	L2b	LINE/L2	3258	3372	(3)	1199226
299	26.0	4.0	1.0	chr14	69287394	69287490	(37756228)	+	L4_C_Mam	LINE/RTE-X	4804	4903	(235)	1199227
322	25.0	8.5	3.6	chr14	69287658	69287769	(37755949)	C	MIRc	SINE/MIR	(149)	119	2	1199228
1807	16.8	1.4	0.7	chr14	69778883	69779174	(37264544)	+	AluJb	SINE/Alu	3	296	(16)	1200184
12673	9.4	0.2	0.9	chr14	70263393	70264674	(36779044)	+	THE1A-int	LTR/ERVL-MaLR	1	1284	(296)	1200935
25	18.6	9.2	2.5	chr14	70600745	70600853	(36442865)	+	(GAGCGG)n	Simple_repeat	1	119	(0)	1201387
29	0.0	0.0	3.1	chr14	70600857	70600888	(36442830)	+	(GTGGG)n	Simple_repeat	1	32	(0)	1201388
454	37.6	7.9	1.4	chr14	70602328	70602714	(36441004)	C	L2a	LINE/L2	(204)	3222	2815	1201392
491	26.8	1.6	0.8	chr14	70602753	70602876	(36440842)	C	MIRb	SINE/MIR	(17)	251	127	1201393
589	30.2	10.5	2.2	chr14	70602878	70603236	(36440482)	+	MLT1J2	LTR/ERVL-MaLR	1	392	(56)	1201394
120	26.7	6.7	0.8	chr14	70822242	70822735	(36220983)	+	(CT)n	Simple_repeat	1	527	(0)	1201805
23	21.1	1.3	5.1	chr14	70907480	70907557	(36136161)	+	(GGCGGC)n	Simple_repeat	1	79	(0)	1201960
30	16.4	4.5	4.3	chr14	70907604	70907692	(36136026)	+	(CTC)n	Simple_repeat	1	93	(0)	1201961
13	11.0	0.0	6.1	chr14	71320402	71320434	(35723284)	+	G-rich	Low_complexity	1	33	(0)	1202618
14	19.5	0.0	2.7	chr14	71320464	71320500	(35723218)	+	(GTGA)n	Simple_repeat	1	37	(0)	1202619
14	22.0	3.6	3.5	chr14	71320800	71320855	(35722863)	+	G-rich	Low_complexity	1	58	(0)	1202620
16	24.8	0.0	3.6	chr14	71321008	71321016	(35722702)	+	(GCCGCTC)n	Simple_repeat	1	51	(0)	1202621
16	7.6	11.9	0.0	chr14	71321017	71321058	(35722660)	+	(CGCTCGG)n	Simple_repeat	1	47	(0)	1202622
194	33.8	4.5	7.5	chr14	71961990	71962149	(35081569)	C	MIR	SINE/MIR	(55)	207	53	1203579
1985	18.0	2.3	8.0	chr14	72336679	72337089	(34706629)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	1	1204147
14	25.4	0.0	6.3	chr14	72337220	72337282	(34706436)	+	(ACCCCC)n	Simple_repeat	1	63	(0)	1204148
12	18.9	7.1	0.0	chr14	74612113	74612154	(32431564)	+	(GCTCCGA)n	Simple_repeat	1	45	(0)	1208835
19	20.1	1.9	1.9	chr14	74612690	74612747	(32430971)	+	G-rich	Low_complexity	1	58	(0)	1208836
13	19.4	4.8	8.1	chr14	74882086	74882168	(32161550)	+	(GGCCG)n	Simple_repeat	1	87	(0)	1209340
11	18.6	0.0	7.1	chr14	74980856	74980897	(32062821)	+	(CTGCCGG)n	Simple_repeat	1	42	(0)	1209516
13	4.8	4.5	0.0	chr14	74980927	74980948	(32062770)	+	(CGG)n	Simple_repeat	1	23	(0)	1209517
2305	7.4	4.5	0.3	chr14	75293621	75293946	(31749772)	+	AluSx	SINE/Alu	1	312	(0)	1210139
366	20.0	11.5	1.2	chr14	75977461	75977546	(31066172)	C	MIR3	SINE/MIR	(5)	203	108	1211412
17	0.0	0.0	0.0	chr14	75977657	75977675	(31066043)	+	(A)n	Simple_repeat	1	19	(0)	1211413
14	20.6	2.6	0.0	chr14	75981763	75981801	(31061917)	+	A-rich	Low_complexity	1	40	(0)	1211416
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
24	13.6	3.3	3.2	chr14	75982659	75982718	(31061000)	+	G-rich	Low_complexity	1	62	(0)	1211418
4284	15.7	3.3	0.8	chr14	76687591	76688292	(30355426)	+	MER50	LTR/ERV1	3	722	(12)	1212769
322	27.5	15.6	1.1	chr14	76956108	76956287	(30087431)	C	L2a	LINE/L2	(541)	2878	2668	1213288
14	20.1	2.0	4.0	chr14	76956446	76956494	(30087224)	+	(CCCCT)n	Simple_repeat	1	50	(0)	1213290
12	22.2	6.4	0.0	chr14	76956643	76956689	(30087029)	+	(GCCGGCC)n	Simple_repeat	1	50	(0)	1213291
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
19	7.8	4.5	4.3	chr14	77040280	77040323	(30003395)	+	GA-rich	Low_complexity	1	46	(0)	1213492
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
4887	9.0	1.9	1.8	chr14	78000904	78001922	(29041796)	+	MER11A	LTR/ERVK	1	1266	(0)	1215455
1725	15.6	0.7	5.6	chr14	78001923	78002033	(29041685)	+	THE1B	LTR/ERVL-MaLR	75	184	(180)	1215456
20	14.4	0.0	0.0	chr14	78598369	78598400	(28445318)	+	(AG)n	Simple_repeat	1	32	(0)	1216499
13	9.8	0.0	0.0	chr14	80955697	80955718	(26088000)	+	(TGC)n	Simple_repeat	1	22	(0)	1219892
10642	5.2	1.2	2.6	chr14	81243891	81245290	(25798428)	C	SVA_B	Retroposon/SVA	(0)	1383	4	1220337
3679	21.4	2.2	1.2	chr14	81245291	81245999	(25797719)	C	L1MA5A	LINE/L1	(4917)	2649	1953	1220332
756	22.7	6.1	0.0	chr14	81537720	81537904	(25505814)	C	MER90	LTR/ERV1	(27)	587	391	1220780
6752	7.9	16.7	0.8	chr14	81537919	81538981	(25504737)	C	MER11A	LTR/ERVK	(0)	1266	1	1220781
2105	13.4	2.3	2.8	chr14	84444020	84444230	(22599488)	C	LTR06	LTR/ERV1	(147)	329	127	1224799
61	14.0	1.8	0.9	chr14	84444236	84444348	(22599370)	+	(TCCCC)n	Simple_repeat	1	115	(0)	1224802
476	19.1	4.3	6.8	chr14	84444350	84444467	(22599251)	C	LTR06	LTR/ERV1	(359)	117	3	1224799
9716	13.5	3.2	3.8	chr14	85053448	85055028	(21988690)	C	THE1C-int	LTR/ERVL-MaLR	(9)	1571	1	1225670
333	25.0	6.2	5.5	chr14	87518039	87518165	(19525553)	C	MER65B	LTR/ERV1	(403)	128	1	1229095
900	25.7	2.2	5.3	chr14	87518269	87518589	(19525129)	+	MLT1B	LTR/ERVL-MaLR	76	386	(4)	1229096
13	23.3	4.4	0.0	chr14	88554937	88554981	(18488737)	+	(GGAC)n	Simple_repeat	1	47	(0)	1230608
24	15.7	0.0	6.2	chr14	89417243	89417319	(17626399)	+	GA-rich	Low_complexity	1	72	(0)	1232039
28	24.0	1.6	4.2	chr14	90300854	90300965	(16742753)	+	G-rich	Low_complexity	1	109	(0)	1233627
304	24.7	6.3	0.0	chr14	90321809	90321897	(16721821)	C	Charlie15a	DNA/hAT-Charlie	(7)	217	123	1233668
7665	6.6	14.7	2.5	chr14	90823110	90824217	(16219501)	+	MER11A	LTR/ERVK	1	1266	(0)	1234537
4791	8.1	1.9	2.0	chr14	90953101	90954214	(16089504)	+	MER11A	LTR/ERVK	1	1263	(3)	1234738
2298	15.2	6.6	8.8	chr14	90954218	90954402	(16089316)	C	L1M4b	LINE/L1	(2458)	4548	4358	1234736
2150	14.2	0.0	0.0	chr14	90954403	90954713	(16089005)	C	AluSx1	SINE/Alu	(1)	311	1	1234740
14	21.1	3.8	3.6	chr14	91060370	91060422	(15983296)	+	(CCG)n	Simple_repeat	1	55	(0)	1234941
327	31.4	13.4	2.8	chr14	91953516	91953728	(15089990)	C	MIRb	SINE/MIR	(28)	240	2	1236613
4175	22.4	11.2	2.5	chr14	92244235	92245592	(14798126)	C	MSTB1-int	LTR/ERVL-MaLR	(0)	1580	49	1237171
24	22.4	1.3	3.8	chr14	93115402	93115479	(13928239)	+	(CCGC)n	Simple_repeat	1	79	(0)	1238816
18	18.4	4.1	0.0	chr14	93115477	93115525	(13928193)	+	(GGCTGA)n	Simple_repeat	1	51	(0)	1238817
13	20.9	0.0	0.0	chr14	93430903	93430935	(13612783)	+	G-rich	Low_complexity	1	33	(0)	1239455
17	31.2	0.0	2.3	chr14	93431145	93431215	(13612503)	+	G-rich	Low_complexity	1	69	(0)	1239456
451	29.0	8.6	6.2	chr14	93800494	93800749	(13242969)	+	L2c	LINE/L2	3010	3274	(101)	1240029
4770	12.1	0.8	7.3	chr14	94199251	94200088	(12843630)	C	LTR1	LTR/ERV1	(0)	783	1	1240794
3368	23.8	6.4	3.4	chr14	94200089	94200381	(12843337)	C	L1ME1	LINE/L1	(1742)	4404	4108	1240793
12	17.2	4.9	2.3	chr14	94769800	94769840	(12273878)	+	(CGCGGCCG)n	Simple_repeat	1	43	(0)	1241774
267	25.9	8.0	5.3	chr14	94854340	94854510	(12189208)	+	MER20B	DNA/hAT-Charlie	1	176	(607)	1241979
1231	27.9	13.0	4.7	chr14	94854572	94855233	(12188485)	+	MER20B	DNA/hAT-Charlie	15	739	(44)	1241980
15	4.1	4.0	0.0	chr14	95876226	95876250	(11167468)	+	(CCCCT)n	Simple_repeat	1	26	(0)	1243876
12	18.0	0.0	7.0	chr14	96363020	96363062	(10680656)	+	(CGGCTC)n	Simple_repeat	1	43	(0)	1244738
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
38	23.2	5.4	3.4	chr14	100238902	100239067	(6804651)	+	(GAGGC)n	Simple_repeat	1	175	(0)	1251501
33	22.3	5.6	2.3	chr14	100239072	100239196	(6804522)	+	(CCCG)n	Simple_repeat	1	132	(0)	1251502
21	8.9	1.8	8.6	chr14	100306609	100306665	(6737053)	+	G-rich	Low_complexity	1	58	(0)	1251631
13	5.2	0.0	0.0	chr14	100685442	100685461	(6358257)	+	(AAC)n	Simple_repeat	1	20	(0)	1252261
12	21.2	2.1	4.2	chr14	100736839	100736885	(6306833)	+	(CCCCGT)n	Simple_repeat	1	48	(0)	1252324
10406	24.8	2.5	3.5	chr14	100747253	100747599	(6296119)	+	ERVL-E-int	LTR/ERVL	2940	3273	(2394)	1252340
2176	13.0	1.0	0.0	chr14	100747600	100747900	(6295818)	C	AluSx1	SINE/Alu	(7)	305	2	1252346
85	25.2	3.2	3.1	chr14	100828321	100828629	(6215089)	+	(TCCTCCC)n	Simple_repeat	1	319	(0)	1252460
14	14.6	0.0	3.1	chr14	100900902	100900933	(6142785)	+	(AAC)n	Simple_repeat	1	32	(0)	1252541
250	26.2	4.9	3.0	chr14	100911380	100911522	(6132196)	C	MIR	SINE/MIR	(81)	149	5	1252561
822	22.1	9.8	3.7	chr14	101373507	101373799	(5669919)	C	MLT1C	LTR/ERVL-MaLR	(156)	349	8	1253059
12	22.6	5.7	1.8	chr14	102087264	102087316	(4956402)	+	(CGCGCGC)n	Simple_repeat	1	56	(0)	1254194
12	18.4	5.4	0.0	chr14	102087355	102087391	(4956327)	+	(CCGCCCT)n	Simple_repeat	1	39	(0)	1254195
443	27.7	19.3	0.2	chr14	102314496	102314893	(4728825)	C	L2a	LINE/L2	(5)	3421	2930	1254648
560	20.3	2.7	2.0	chr14	102314947	102315092	(4728626)	C	MER53	DNA/hAT	(45)	148	2	1254649
756	17.3	0.8	1.6	chr14	102524471	102524597	(4519121)	C	AluJr	SINE/Alu	(186)	126	1	1255086
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
20	20.2	4.7	1.5	chr14	102592774	102592837	(4450881)	+	(CCCGC)n	Simple_repeat	1	67	(0)	1255260
65	18.6	0.7	0.7	chr14	102592946	102593081	(4450637)	+	(CGCCGC)n	Simple_repeat	1	137	(0)	1255261
1240	9.5	1.1	2.8	chr14	102628894	102629072	(4414646)	C	AluJb	SINE/Alu	(13)	299	124	1255364
496	31.3	4.9	8.5	chr14	102629079	102629500	(4414218)	+	L2a	LINE/L2	3000	3405	(21)	1255345
14	18.8	3.2	4.2	chr14	103334689	103334755	(3708963)	+	G-rich	Low_complexity	1	66	(0)	1256589
14	11.7	0.0	3.3	chr14	103521991	103522020	(3521698)	+	(CCCG)n	Simple_repeat	1	30	(0)	1256988
12	11.2	3.2	3.1	chr14	103522181	103522211	(3521507)	+	G-rich	Low_complexity	1	32	(0)	1256989
784	11.9	1.5	3.7	chr14	103528850	103528983	(3514735)	C	AluJo	SINE/Alu	(181)	131	1	1256995
15	22.5	1.8	3.6	chr14	103529138	103529192	(3514526)	+	(GGCGGA)n	Simple_repeat	1	56	(0)	1256996
1795	19.4	0.0	2.0	chr14	104129037	104129208	(2914510)	C	AluJr	SINE/Alu	(14)	298	131	1258128
64	6.4	0.0	1.2	chr14	104129209	104129292	(2914426)	+	(TCCCT)n	Simple_repeat	1	84	(0)	1258129
1795	19.4	0.0	2.0	chr14	104129293	104129423	(2914295)	C	AluJr	SINE/Alu	(182)	130	1	1258128
1840	28.4	12.9	2.8	chr14	104129424	104130307	(2913411)	C	HAL1	LINE/L1	(519)	1988	973	1258127
68	18.8	0.0	0.0	chr14	104150111	104150240	(2893478)	+	(CCTCCT)n	Simple_repeat	1	130	(0)	1258144
209	20.0	0.0	0.0	chr14	104150629	104150668	(2893050)	+	MIR3	SINE/MIR	115	154	(54)	1258145
7978	6.2	11.5	3.9	chr14	104481740	104482904	(2560814)	C	MER11A	LTR/ERVK	(0)	1266	1	1258458
1127	27.9	9.6	3.5	chr14	104649574	104650142	(2393576)	C	Charlie2b	DNA/hAT-Charlie	(185)	2597	1991	1258647
13	19.9	4.9	0.0	chr14	104650405	104650445	(2393273)	+	(CCACTCC)n	Simple_repeat	1	43	(0)	1258648
19	15.6	4.8	4.5	chr14	104650446	104650463	(2393255)	+	(CCCTCC)n	Simple_repeat	5	66	(0)	1258649
22	16.2	2.0	2.0	chr14	104677815	104677864	(2365854)	+	(CCT)n	Simple_repeat	1	51	(0)	1258705
16	14.9	0.0	4.9	chr14	105041980	105042020	(2001698)	+	(GCCCT)n	Simple_repeat	1	41	(0)	1259151
29	16.8	4.8	5.5	chr14	105248546	105248649	(1795069)	+	G-rich	Low_complexity	1	109	(0)	1259422
14	7.5	3.3	3.2	chr14	105248799	105248828	(1794890)	+	(CGGCG)n	Simple_repeat	1	31	(0)	1259423
26	0.0	0.0	3.3	chr14	105411517	105411546	(1632172)	+	(CCCCG)n	Simple_repeat	1	30	(0)	1259652
932	29.5	6.7	5.6	chr14	105414171	105414608	(1629110)	C	MLT1D	LTR/ERVL-MaLR	(49)	456	1	1259654
346	34.3	7.1	0.7	chr14	105504344	105504619	(1539099)	+	MLT1J-int	LTR/ERVL-MaLR	161	455	(932)	1259753
4256	6.7	3.6	4.7	chr14	105778223	105779313	(1264405)	C	MER11A	LTR/ERVK	(4)	1262	1	1260007
1659	14.5	0.3	2.0	chr15	20282672	20282966	(81708223)	+	TAR1	Satellite/telo	1525	1814	(297)	1263103
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
736	32.0	1.5	1.5	chr15	22768021	22770908	(79220281)	+	(CTC)n	Simple_repeat	1	2931	(0)	1266259
25	22.4	3.2	4.1	chr15	22786514	22786608	(79204581)	+	(CCCCCG)n	Simple_repeat	1	98	(0)	1266288
21	10.4	0.0	6.4	chr15	22786608	22786654	(79204535)	+	G-rich	Low_complexity	1	47	(0)	1266289
29	3.2	0.0	0.0	chr15	22786672	22786703	(79204486)	+	(GCG)n	Simple_repeat	1	32	(0)	1266290
26	20.3	7.8	0.0	chr15	22786839	22786928	(79204261)	+	(GGCAGGC)n	Simple_repeat	1	97	(0)	1266291
24	29.7	4.5	0.0	chr15	22786929	22786948	(79204241)	+	G-rich	Low_complexity	1	115	(0)	1266292
13	20.1	0.0	2.8	chr15	22980184	22980219	(79010970)	+	(GGCCC)n	Simple_repeat	1	36	(0)	1266653
233	28.2	9.9	3.0	chr15	29140054	29140221	(72850968)	+	LTR33A	LTR/ERVL	322	502	(18)	1275018
5104	10.6	6.4	0.7	chr15	29524419	29525153	(72466036)	C	LTR17	LTR/ERV1	(0)	780	1	1275565
2766	17.2	6.1	2.0	chr15	29525154	29525481	(72465708)	+	L1MB7	LINE/L1	6043	6389	(293)	1275563
29	21.4	3.0	3.9	chr15	29674694	29674792	(72316397)	+	GA-rich	Low_complexity	1	102	(0)	1275853
2655	5.5	0.0	0.0	chr15	33805470	33805776	(68185413)	C	AluYm1	SINE/Alu	(4)	307	1	1281789
28	25.8	3.9	4.4	chr15	33805885	33805900	(68185289)	+	(CTCTC)n	Simple_repeat	1	85	(50)	1281790
20	34.9	0.0	4.4	chr15	33805901	33806013	(68185176)	+	(CCTC)n	Simple_repeat	1	113	(0)	1281791
28	25.8	3.9	4.4	chr15	33806014	33806020	(68185169)	+	(CTCTC)n	Simple_repeat	86	135	(0)	1281790
402	28.6	7.5	0.6	chr15	35545733	35545894	(66445295)	+	MER5B	DNA/hAT-Charlie	2	175	(3)	1284508
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
12	20.8	0.0	2.9	chr15	38252257	38252291	(63738898)	+	(GGC)n	Simple_repeat	1	35	(0)	1288014
448	23.8	5.2	2.6	chr15	40338045	40338198	(61652991)	+	MIR	SINE/MIR	70	235	(33)	1291026
13	16.9	4.5	4.3	chr15	40927824	40927867	(61063322)	+	(CCA)n	Simple_repeat	1	46	(0)	1292210
617	21.3	13.1	0.3	chr15	41402121	41402288	(60588901)	C	MIR	SINE/MIR	(2)	266	66	1293268
14	8.3	0.0	6.7	chr15	41514140	41514169	(60477020)	+	(GTG)n	Simple_repeat	1	30	(0)	1293532
26	26.8	2.5	4.1	chr15	41558999	41559118	(60432071)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	1293644
17	17.8	1.7	6.8	chr15	41559164	41559221	(60431968)	+	(CCT)n	Simple_repeat	1	59	(0)	1293645
18	35.7	1.0	2.0	chr15	41559281	41559379	(60431810)	+	(GCC)n	Simple_repeat	1	100	(0)	1293646
17	17.4	3.0	7.2	chr15	41972413	41972419	(60018770)	+	(GCCC)n	Simple_repeat	1	20	(49)	1294334
13	19.1	0.0	0.0	chr15	42575235	42575264	(59415925)	+	G-rich	Low_complexity	1	30	(0)	1295396
18	14.5	7.3	1.7	chr15	42575615	42575669	(59415520)	+	G-rich	Low_complexity	1	59	(0)	1295397
15	25.2	1.7	3.3	chr15	42737122	42737181	(59254008)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1295667
205	22.0	13.2	0.0	chr15	43372624	43372682	(58618507)	+	OldhAT1	DNA/hAT-Ac	2715	2782	(66)	1296868
490	30.0	12.1	1.8	chr15	43372718	43372999	(58618190)	+	L2a	LINE/L2	3111	3425	(1)	1296869
4260	8.2	3.0	1.8	chr15	44770427	44771400	(57219789)	+	MER11A	LTR/ERVK	2	1235	(31)	1299526
16300	7.1	0.3	1.7	chr15	44771412	44772231	(57218958)	C	L1PB	LINE/L1	(542)	5609	4799	1299527
2047	4.7	4.9	0.0	chr15	45022727	45022979	(56968210)	+	AluY	SINE/Alu	1	266	(45)	1299949
18	17.6	2.7	7.8	chr15	45167093	45167167	(56824022)	+	(GCCGCGG)n	Simple_repeat	1	77	(0)	1300158
63138	4.2	0.4	0.2	chr15	45235064	45242440	(56748749)	C	HERVK14C-int	LTR/ERVK	(0)	7434	47	1300294
680	14.4	1.6	4.5	chr15	45242441	45242486	(56748703)	C	AluSx	SINE/Alu	(183)	129	89	1300295
4884	5.5	0.2	0.2	chr15	45242487	45243073	(56748116)	C	LTR14C	LTR/ERVK	(0)	587	1	1300296
227	38.0	0.0	0.0	chr15	47286688	47286758	(54704431)	C	Charlie1b	DNA/hAT-Charlie	(452)	71	1	1303176
226	32.5	5.0	2.3	chr15	51362972	51363185	(50628004)	C	L2-1_AMi	LINE/L2	(610)	625	406	1309447
13	30.4	4.4	0.0	chr15	51622857	51622924	(50368265)	+	(GAGC)n	Simple_repeat	1	71	(0)	1309765
73	30.2	2.9	7.2	chr15	52118994	52119574	(49871615)	+	GA-rich	Low_complexity	1	598	(0)	1310757
269	22.4	6.3	0.7	chr15	52119633	52119706	(49871483)	C	MIR3	SINE/MIR	(29)	179	107	1310758
515	22.0	11.8	7.0	chr15	55319411	55319610	(46671579)	C	MER102b	DNA/hAT-Charlie	(59)	282	72	1315309
820	20.2	5.8	2.3	chr15	55319645	55319876	(46671313)	+	MIRb	SINE/MIR	14	251	(11)	1315310
30	15.3	1.7	0.0	chr15	55993613	55993670	(45997519)	+	GA-rich	Low_complexity	1	59	(0)	1316534
35	9.7	5.8	1.4	chr15	56243300	56243421	(45747768)	+	GA-rich	Low_complexity	1	127	(0)	1316884
12	20.1	2.9	0.0	chr15	56733162	56733195	(45257994)	+	GA-rich	Low_complexity	1	35	(0)	1317504
21	12.6	0.0	0.0	chr15	56733492	56733527	(45257662)	+	(GAG)n	Simple_repeat	1	36	(0)	1317505
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
33	24.8	3.5	2.5	chr15	57323971	57324084	(44667105)	+	GA-rich	Low_complexity	1	118	(0)	1318503
17	11.2	0.0	0.0	chr15	58749538	58749566	(43241623)	+	(CCG)n	Simple_repeat	1	29	(0)	1320716
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
256	25.1	5.1	3.4	chr15	59610392	59611367	(42379822)	+	(TTCC)n	Simple_repeat	4	1066	(0)	1322451
12	12.2	3.7	0.0	chr15	59616282	59616308	(42374881)	+	A-rich	Low_complexity	1	28	(0)	1322461
16	25.4	1.7	3.3	chr15	60004161	60004220	(41986969)	+	(CCT)n	Simple_repeat	1	61	(0)	1323102
48	30.4	2.6	0.0	chr15	60349696	60349851	(41641338)	+	GA-rich	Low_complexity	1	160	(0)	1323643
20	19.2	0.0	2.0	chr15	60398048	60398096	(41593093)	+	(CCCGC)n	Simple_repeat	1	49	(0)	1323705
278	11.8	0.2	3.5	chr15	61071214	61071702	(40919487)	+	G-rich	Low_complexity	1	490	(0)	1324752
7045	18.4	5.2	1.3	chr15	61415027	61416271	(40574918)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	341	1325278
1741	19.0	4.7	12.3	chr15	62262415	62263071	(39728118)	C	LTR10E	LTR/ERV1	(67)	566	1	1326597
13	16.8	0.0	5.4	chr15	63189497	63189533	(38801656)	+	(GGCGG)n	Simple_repeat	1	37	(0)	1328138
17	20.1	0.0	0.0	chr15	64775251	64775290	(37215899)	+	(GCCGGA)n	Simple_repeat	1	40	(0)	1331157
12	19.2	7.1	0.0	chr15	64775511	64775552	(37215637)	+	G-rich	Low_complexity	1	45	(0)	1331158
41	12.2	4.2	4.0	chr15	64775580	64775675	(37215514)	+	(CGG)n	Simple_repeat	1	100	(0)	1331159
13	16.6	2.2	6.4	chr15	64841566	64841611	(37149578)	+	(CGCCC)n	Simple_repeat	1	47	(0)	1331337
35	23.0	0.0	5.9	chr15	64841761	64841881	(37149308)	+	(CCCCGC)n	Simple_repeat	1	113	(0)	1331338
12	27.2	0.0	3.9	chr15	65185348	65185353	(36805836)	+	(CCCCAC)n	Simple_repeat	1	48	(0)	1332077
13	24.6	0.0	2.4	chr15	65185354	65185395	(36805794)	+	(CCCCCT)n	Simple_repeat	1	42	(0)	1332078
23	12.0	4.4	0.0	chr15	65422877	65422921	(36568268)	+	(GCC)n	Simple_repeat	1	47	(0)	1332586
12	17.0	8.3	1.9	chr15	65423107	65423154	(36568035)	+	(CCCTGCG)n	Simple_repeat	1	52	(0)	1332587
209	30.6	5.5	0.0	chr15	65559177	65559261	(36431928)	C	X7C_LINE	LINE/CR1	(93)	143	54	1332903
341	21.7	0.0	0.0	chr15	65559528	65559587	(36431602)	+	Charlie15a	DNA/hAT-Charlie	1	60	(164)	1332904
277	22.8	12.4	0.0	chr15	65559608	65559699	(36431490)	+	Charlie15a	DNA/hAT-Charlie	112	216	(8)	1332905
12	17.2	2.2	6.5	chr15	65792134	65792178	(36199011)	+	(CCCG)n	Simple_repeat	1	46	(0)	1333344
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
251	23.4	0.0	4.5	chr15	65995256	65995322	(35995867)	C	MER5C	DNA/hAT-Charlie	(0)	313	250	1333774
1055	24.0	3.0	0.8	chr15	65995322	65995577	(35995612)	C	Charlie10	DNA/hAT-Charlie	(2560)	262	1	1333775
25	24.4	0.9	6.4	chr15	66253680	66253702	(35737487)	+	(GCGGCGG)n	Simple_repeat	1	61	(49)	1334276
13	25.6	5.7	2.7	chr15	66253703	66253772	(35737417)	+	(GCGG)n	Simple_repeat	1	74	(0)	1334277
25	24.4	0.9	6.4	chr15	66253773	66253788	(35737401)	+	(GCGGCGG)n	Simple_repeat	62	110	(0)	1334276
23	21.7	3.5	4.4	chr15	66253803	66253904	(35737285)	+	(TCCC)n	Simple_repeat	1	100	(0)	1334278
15	12.7	0.0	5.3	chr15	66293695	66293732	(35697457)	+	(CCGCAGC)n	Simple_repeat	1	38	(0)	1334370
23	23.0	3.2	4.2	chr15	66293740	66293832	(35697357)	+	G-rich	Low_complexity	1	96	(0)	1334371
410	31.4	6.8	4.0	chr15	66390672	66390998	(35600191)	+	L2b	LINE/L2	2815	3144	(231)	1334603
14	23.8	1.7	4.9	chr15	66701080	66701139	(35290050)	+	G-rich	Low_complexity	1	61	(0)	1335295
12	22.4	2.7	0.0	chr15	66701480	66701516	(35289673)	+	(CCGG)n	Simple_repeat	1	38	(0)	1335296
21	18.4	0.0	0.0	chr15	66701954	66701991	(35289198)	+	(TG)n	Simple_repeat	1	38	(0)	1335297
17	20.9	0.0	5.5	chr15	66702311	66702366	(35288823)	+	(GAGC)n	Simple_repeat	1	52	(0)	1335298
584	30.3	14.4	3.1	chr15	67118987	67119501	(34871688)	C	L2c	LINE/L2	(1018)	2401	1819	1336100
240	34.4	8.9	0.9	chr15	67465781	67466006	(34525183)	+	L2	LINE/L2	2592	2837	(582)	1336648
185	32.9	10.6	3.2	chr15	67743817	67743973	(34247216)	C	MIR3	SINE/MIR	(26)	182	13	1337091
17	0.0	0.0	0.0	chr15	67794639	67794657	(34196532)	+	(A)n	Simple_repeat	1	19	(0)	1337144
346	36.1	6.7	0.0	chr15	67863995	67864174	(34127015)	C	MIRc	SINE/MIR	(53)	215	23	1337258
3927	15.0	5.1	1.8	chr15	68476166	68476671	(33514518)	+	L1MD1	LINE/L1	4619	5142	(1004)	1338406
1953	18.5	9.1	0.0	chr15	68476672	68477060	(33514129)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1338407
4823	14.8	7.0	1.6	chr15	68477061	68478073	(33513116)	+	L1MD1	LINE/L1	5143	6214	(28)	1338406
1222	22.2	11.3	0.6	chr15	68559886	68560225	(33430964)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	42	1338559
29	10.4	6.2	1.5	chr15	68579188	68579251	(33411938)	+	(CCGCCG)n	Simple_repeat	1	68	(0)	1338605
13	23.2	2.1	2.1	chr15	68579336	68579382	(33411807)	+	G-rich	Low_complexity	1	48	(0)	1338606
207	37.2	10.9	1.1	chr15	68715725	68715898	(33275291)	+	L2	LINE/L2	27	219	(3200)	1338904
20	3.1	6.1	0.0	chr15	68818036	68818068	(33173121)	+	(AAAT)n	Simple_repeat	1	35	(0)	1339115
19	19.5	3.1	8.1	chr15	68818107	68818202	(33172987)	+	(CCGCGCC)n	Simple_repeat	1	99	(0)	1339116
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
13	19.4	0.0	2.7	chr15	68818818	68818854	(33172335)	+	(CCCCCA)n	Simple_repeat	1	37	(0)	1339118
11	31.8	1.9	0.0	chr15	68818933	68818986	(33172203)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	1339119
17	14.7	5.2	4.9	chr15	68820186	68820243	(33170946)	+	GA-rich	Low_complexity	1	61	(0)	1339121
307	15.5	24.5	0.0	chr15	68888025	68888095	(33103094)	+	Charlie10	DNA/hAT-Charlie	2	95	(2727)	1339248
1284	25.4	16.6	6.2	chr15	68888102	68888904	(33102285)	C	L1MCc	LINE/L1	(5502)	921	19	1339249
17	4.9	0.0	0.0	chr15	70096656	70096676	(31894513)	+	(CA)n	Simple_repeat	1	21	(0)	1341461
42	0.0	0.0	0.0	chr15	70386638	70386673	(31604516)	+	(AC)n	Simple_repeat	1	36	(0)	1342048
19	17.0	0.0	0.0	chr15	70853980	70854019	(31137170)	+	(CCTCGT)n	Simple_repeat	1	40	(0)	1342866
32	0.0	7.5	0.0	chr15	70854226	70854265	(31136924)	+	(CGC)n	Simple_repeat	1	43	(0)	1342867
18	28.7	0.0	2.8	chr15	72230283	72230354	(29760835)	+	(CCCGCCG)n	Simple_repeat	1	69	(0)	1345107
12	17.0	2.2	6.5	chr15	72230804	72230848	(29760341)	+	(GAGGATG)n	Simple_repeat	1	46	(0)	1345108
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
16	9.1	2.6	5.0	chr15	72320149	72320187	(29671002)	+	(CCCGAGC)n	Simple_repeat	1	40	(0)	1345248
1795	21.2	13.4	3.0	chr15	72512806	72513666	(29477523)	C	L1MD3	LINE/L1	(3560)	2984	1980	1345627
14	23.4	3.0	5.8	chr15	73052019	73052085	(28939104)	+	GA-rich	Low_complexity	1	69	(0)	1346523
22	23.7	5.8	0.0	chr15	73052219	73052287	(28938902)	+	(GC)n	Simple_repeat	1	73	(0)	1346524
28	0.0	0.0	3.2	chr15	73052293	73052323	(28938866)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	1346525
16	13.2	0.0	0.0	chr15	73052406	73052430	(28938759)	+	(C)n	Simple_repeat	1	25	(0)	1346526
12	16.5	5.9	0.0	chr15	73052443	73052476	(28938713)	+	(CTCCC)n	Simple_repeat	1	36	(0)	1346527
19	17.9	1.9	3.6	chr15	73052520	73052573	(28938616)	+	G-rich	Low_complexity	1	55	(0)	1346528
13	10.5	6.5	0.0	chr15	73052629	73052659	(28938530)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	1346529
21	15.4	4.8	6.9	chr15	73052747	73052829	(28938360)	+	G-rich	Low_complexity	1	87	(0)	1346530
2214	15.2	6.5	0.0	chr15	73485419	73485818	(28505371)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1347218
25	21.0	0.0	1.6	chr15	73633270	73633331	(28357858)	+	G-rich	Low_complexity	1	62	(0)	1347427
289	24.7	0.0	5.8	chr15	73699835	73699929	(28291260)	+	MIRc	SINE/MIR	77	162	(46)	1347568
743	28.0	6.6	1.7	chr15	73699935	73700278	(28290911)	+	L2a	LINE/L2	2996	3373	(2)	1347566
239	14.6	2.4	0.0	chr15	73700293	73700333	(28290856)	+	MIRb	SINE/MIR	219	260	(8)	1347569
30	23.8	4.0	1.0	chr15	73752907	73753006	(28238183)	+	G-rich	Low_complexity	1	104	(0)	1347658
35	27.7	2.6	0.0	chr15	73753146	73753262	(28237927)	+	(CCGCC)n	Simple_repeat	1	120	(0)	1347659
2360	6.5	0.7	1.0	chr15	74135465	74135802	(27855387)	C	AluSc	SINE/Alu	(0)	309	1	1348314
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
19	21.5	1.5	4.5	chr15	74956809	74956873	(27034316)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1349865
14	10.3	3.0	2.9	chr15	74956911	74956943	(27034246)	+	G-rich	Low_complexity	1	34	(0)	1349866
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
228	36.1	0.9	2.7	chr15	75110206	75110316	(26880873)	+	MIR3	SINE/MIR	98	206	(2)	1350200
256	32.8	1.5	4.4	chr15	75110878	75111014	(26880175)	C	MamSINE1	SINE/tRNA-RTE	(68)	222	90	1350201
2008	17.1	6.9	2.8	chr15	75306129	75306519	(26684670)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1350532
1544	20.0	2.2	3.7	chr15	75306520	75306537	(26684652)	+	L1ME3	LINE/L1	6147	6161	(1)	1350530
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
2547	6.7	0.0	0.9	chr15	75624760	75625075	(26366114)	C	AluSq	SINE/Alu	(0)	313	1	1351237
274	31.4	4.8	7.3	chr15	75626243	75626393	(26364796)	+	L2b	LINE/L2	3221	3367	(8)	1351238
216	30.3	1.3	0.0	chr15	75842893	75842968	(26148221)	C	L2a	LINE/L2	(676)	2743	2667	1351618
13	21.9	2.0	3.9	chr15	77419740	77419790	(24571399)	+	G-rich	Low_complexity	1	52	(0)	1354017
14	4.0	7.7	0.0	chr15	77420098	77420123	(24571066)	+	(ACTA)n	Simple_repeat	1	28	(0)	1354018
30	26.2	1.9	1.9	chr15	77420146	77420248	(24570941)	+	(CGCC)n	Simple_repeat	1	105	(0)	1354019
20	28.1	5.2	0.0	chr15	77420206	77420282	(24570907)	+	(CG)n	Simple_repeat	1	81	(0)	1354020
696	29.6	6.0	0.0	chr15	77830760	77830992	(24160197)	C	MIR	SINE/MIR	(2)	260	13	1354753
2195	11.4	0.3	0.0	chr15	77831271	77831559	(24159630)	C	AluSp	SINE/Alu	(22)	291	2	1354754
71	15.9	0.0	0.0	chr15	77884983	77885108	(24106081)	+	(CACACA)n	Simple_repeat	1	126	(0)	1354844
340	16.9	0.2	0.0	chr15	77885434	77886029	(24105160)	+	(CA)n	Simple_repeat	1	597	(0)	1354845
187	33.8	0.0	5.3	chr15	77944021	77944095	(24047094)	+	L2a	LINE/L2	3356	3426	(0)	1354913
360	28.6	2.6	8.1	chr15	78130923	78131082	(23860107)	C	MIR	SINE/MIR	(25)	183	33	1355266
15	25.5	6.0	4.8	chr15	78131221	78131337	(23859852)	+	(CCGCGGC)n	Simple_repeat	1	124	(0)	1355267
16	28.6	1.3	3.9	chr15	78131451	78131527	(23859662)	+	(GGCACCC)n	Simple_repeat	1	78	(0)	1355268
184	30.4	8.2	0.7	chr15	78131757	78131902	(23859287)	+	MIR3	SINE/MIR	25	182	(26)	1355269
2429	16.1	4.8	6.5	chr15	78852131	78852636	(23138553)	C	L1MB8	LINE/L1	(186)	5978	5468	1356731
1612	15.1	0.0	9.9	chr15	78852830	78853161	(23138028)	+	AluJr	SINE/Alu	3	301	(11)	1356733
19	20.0	0.9	11.1	chr15	78872783	78872889	(23118300)	+	G-rich	Low_complexity	1	108	(0)	1356790
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
22	20.2	3.7	4.8	chr15	80404293	80404373	(21586816)	+	GA-rich	Low_complexity	1	84	(0)	1359476
19	26.2	1.2	5.8	chr15	80404332	80404417	(21586772)	+	(GGC)n	Simple_repeat	1	87	(0)	1359477
12	17.4	0.0	5.6	chr15	80404448	80404483	(21586706)	+	(CGCCC)n	Simple_repeat	1	36	(0)	1359478
13	18.9	2.8	0.0	chr15	80404686	80404721	(21586468)	+	(CAGCAT)n	Simple_repeat	1	37	(0)	1359479
19	34.3	3.0	4.4	chr15	80417491	80417623	(21573566)	+	(CCCTC)n	Simple_repeat	1	137	(0)	1359500
44	26.9	3.8	3.2	chr15	80417624	80417671	(21573518)	+	(CTCCTC)n	Simple_repeat	3	190	(0)	1359501
273	26.2	8.7	2.3	chr15	80417920	80418048	(21573141)	+	MIR	SINE/MIR	110	247	(15)	1359502
28	0.0	0.0	0.0	chr15	80695066	80695091	(21296098)	+	(GGC)n	Simple_repeat	1	26	(0)	1359952
238	20.0	0.0	0.0	chr15	80722928	80722967	(21268222)	+	MER2	DNA/TcMar-Tigger	25	64	(281)	1360005
691	25.1	6.7	0.6	chr15	80722943	80723110	(21268079)	+	MER8	DNA/TcMar-Tigger	61	239	(0)	1360006
37	7.2	0.0	0.0	chr15	80723123	80723167	(21268022)	+	(TG)n	Simple_repeat	1	45	(0)	1360007
17	4.9	0.0	0.0	chr15	82046770	82046790	(19944399)	+	(CG)n	Simple_repeat	1	21	(0)	1362237
12	4.2	0.0	10.0	chr15	82047140	82047169	(19944020)	+	(CGCCC)n	Simple_repeat	1	30	(0)	1362238
50	0.0	0.0	0.0	chr15	82499002	82499044	(19492145)	+	(AC)n	Simple_repeat	1	43	(0)	1362966
17	19.8	0.0	2.3	chr15	82499045	82499087	(19492102)	+	GA-rich	Low_complexity	1	43	(0)	1362967
13	13.1	2.7	5.3	chr15	82952719	82952755	(19038434)	+	(GCGG)n	Simple_repeat	1	38	(0)	1363737
412	21.8	11.4	1.0	chr15	82953017	82953118	(19038071)	C	MIR3	SINE/MIR	(21)	187	74	1363738
341	14.3	0.0	1.8	chr15	83067477	83067533	(18923656)	C	MER5A	DNA/hAT-Charlie	(75)	114	59	1363979
26	0.0	0.0	0.0	chr15	83207683	83207707	(18783482)	+	(CCG)n	Simple_repeat	1	25	(0)	1364239
13	21.8	1.9	5.6	chr15	83207867	83207877	(18783312)	+	(CCCCG)n	Simple_repeat	1	28	(26)	1364240
18	0.0	11.8	0.0	chr15	83207878	83207911	(18783278)	+	(CCCGCTT)n	Simple_repeat	1	38	(0)	1364241
13	21.8	1.9	5.6	chr15	83207912	83207919	(18783270)	+	(CCCCG)n	Simple_repeat	29	54	(0)	1364240
258	25.6	4.6	10.1	chr15	83208334	83208482	(18782707)	+	MIR3	SINE/MIR	6	150	(118)	1364242
237	26.9	0.0	0.0	chr15	83208476	83208527	(18782662)	C	MIRb	SINE/MIR	(185)	83	32	1364243
15	7.2	0.0	8.6	chr15	83447577	83447629	(18543560)	+	G-rich	Low_complexity	1	48	(0)	1364646
17	17.9	3.7	3.6	chr15	83447824	83447877	(18543312)	+	(GCGGAG)n	Simple_repeat	1	56	(0)	1364647
401	25.5	16.5	5.8	chr15	83448181	83448438	(18542751)	C	L2b	LINE/L2	(73)	3314	3024	1364648
30	9.4	0.0	0.0	chr15	84580701	84580746	(17410443)	+	(TCCCC)n	Simple_repeat	1	46	(0)	1366209
18	13.8	0.0	4.3	chr15	84580746	84580781	(17410408)	+	(TTTTCT)n	Simple_repeat	1	34	(0)	1366210
2007	16.6	0.3	0.0	chr15	84580782	84581082	(17410107)	C	AluJb	SINE/Alu	(9)	303	2	1366211
230	28.8	1.7	0.0	chr15	84981097	84981155	(17010034)	C	MIR	SINE/MIR	(168)	94	35	1367055
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
180	32.4	5.2	10.5	chr15	85168688	85168849	(16822340)	+	MER5A	DNA/hAT-Charlie	19	171	(18)	1367351
184	34.2	8.8	0.0	chr15	85168824	85168896	(16822293)	C	MIR	SINE/MIR	(78)	184	105	1367352
245	13.6	17.0	13.7	chr15	86140194	86140295	(15850894)	C	MER96B	DNA/hAT-Tip100	(280)	137	32	1368995
6325	17.8	6.9	1.0	chr15	87273965	87275321	(14715868)	+	L1MB3	LINE/L1	19	1461	(4923)	1370590
14	25.4	3.1	3.0	chr15	88546596	88546659	(13444530)	+	(GCCCCT)n	Simple_repeat	1	66	(0)	1372570
14	17.7	0.0	0.0	chr15	88848641	88848672	(13142517)	+	(TTTAT)n	Simple_repeat	1	32	(0)	1373133
718	23.9	7.4	1.0	chr15	88848694	88848916	(13142273)	+	MIRb	SINE/MIR	28	262	(6)	1373134
410	24.2	2.9	0.0	chr15	88849165	88849263	(13141926)	+	MER81	DNA/hAT-Blackjack	10	111	(3)	1373135
950	18.0	0.0	3.6	chr15	89043280	89043446	(12947743)	+	AluJr	SINE/Alu	137	297	(15)	1373530
177	13.1	2.1	2.3	chr15	89043447	89043778	(12947411)	+	GA-rich	Low_complexity	3	333	(0)	1373531
1732	13.1	0.0	0.4	chr15	89293405	89293648	(12697541)	+	AluSx1	SINE/Alu	1	243	(69)	1373981
428	33.6	8.0	2.0	chr15	89334120	89334365	(12656824)	+	MIRb	SINE/MIR	5	266	(2)	1374038
12	13.7	6.2	0.0	chr15	89334445	89334476	(12656713)	+	(ACCCAC)n	Simple_repeat	1	34	(0)	1374039
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
27	3.3	0.0	0.0	chr15	89400142	89400172	(12591017)	+	(CCCCG)n	Simple_repeat	1	31	(0)	1374142
721	22.0	2.1	5.2	chr15	90142931	90143122	(11848067)	C	L1MA9	LINE/L1	(0)	6312	6127	1375716
2154	10.1	0.0	0.0	chr15	90175000	90175276	(11815913)	C	AluSc	SINE/Alu	(32)	277	1	1375817
15	27.4	0.0	0.0	chr15	90175414	90175461	(11815728)	+	G-rich	Low_complexity	1	48	(0)	1375818
363	29.9	0.0	3.6	chr15	90175566	90175676	(11815513)	C	L2a	LINE/L2	(5)	3421	3315	1375819
1317	7.7	0.0	2.8	chr15	90249056	90249237	(11741952)	+	AluJo	SINE/Alu	129	305	(7)	1375979
333	29.1	3.8	7.4	chr15	91296292	91296454	(10694735)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	347	1378061
561	17.0	5.7	0.0	chr15	91835380	91835479	(10155710)	+	U13_	snRNA	3	108	(0)	1378948
249	16.9	11.7	6.7	chr15	91835487	91835575	(10155614)	C	MER96B	DNA/hAT-Tip100	(320)	97	4	1378949
37	29.6	1.2	4.1	chr15	91853567	91853734	(10137455)	+	(GGC)n	Simple_repeat	1	170	(0)	1378973
28	3.3	0.0	0.0	chr15	91853871	91853901	(10137288)	+	(GCG)n	Simple_repeat	1	31	(0)	1378974
345	21.2	3.6	0.0	chr15	92438939	92439018	(9552171)	+	MER58B	DNA/hAT-Charlie	177	259	(82)	1379877
384	16.7	1.4	1.4	chr15	92439066	92439138	(9552051)	+	MER58B	DNA/hAT-Charlie	269	341	(0)	1379878
63	24.8	1.3	2.9	chr15	92667958	92668126	(9323063)	+	GA-rich	Low_complexity	1	166	(0)	1380195
13	14.2	0.0	5.7	chr15	92883099	92883133	(9108056)	+	G-rich	Low_complexity	1	35	(0)	1380697
18	4.7	0.0	0.0	chr15	92900204	92900225	(9090964)	+	(TC)n	Simple_repeat	1	22	(0)	1380713
15	12.8	2.8	2.7	chr15	93089225	93089260	(8901929)	+	(CCCGCC)n	Simple_repeat	1	37	(0)	1380971
27	13.8	2.4	8.1	chr15	93089302	93089386	(8901803)	+	G-rich	Low_complexity	1	87	(0)	1380972
2179	15.2	7.3	1.0	chr15	94061918	94062317	(7928872)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	1382566
352	28.9	12.5	0.3	chr15	94661499	94661652	(7329537)	+	L2a	LINE/L2	3206	3421	(5)	1383330
31	11.0	2.0	0.0	chr15	96354141	96354189	(5637000)	+	(AC)n	Simple_repeat	1	50	(0)	1385749
11	21.3	2.9	8.3	chr15	96354281	96354350	(5636839)	+	(CCCGCCC)n	Simple_repeat	1	72	(0)	1385750
2649	19.6	2.0	2.0	chr15	97955391	97955552	(4035637)	C	L1MD3	LINE/L1	(0)	7995	7836	1387912
2081	15.9	0.6	1.4	chr15	97955553	97955909	(4035280)	+	THE1A	LTR/ERVL-MaLR	1	354	(1)	1387913
1859	6.2	4.4	0.4	chr15	99058355	99058594	(2932595)	+	AluSc	SINE/Alu	26	275	(34)	1389535
11	20.7	5.1	0.0	chr15	99058635	99058673	(2932516)	+	G-rich	Low_complexity	1	41	(0)	1389536
29	19.6	1.4	1.4	chr15	99058937	99058950	(2932239)	+	(CCCCGC)n	Simple_repeat	1	69	(0)	1389537
27	21.3	0.0	0.0	chr15	99058951	99059004	(2932185)	+	(C)n	Simple_repeat	1	54	(0)	1389538
1719	19.1	6.3	1.3	chr15	99367261	99367636	(2623553)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1390032
18	24.8	0.0	2.2	chr15	99790753	99790798	(2200391)	+	(AC)n	Simple_repeat	1	46	(0)	1390626
3894	29.6	7.0	5.8	chr15	99967897	99968055	(2023134)	+	ERV3-16A3_I-int	LTR/ERVL	2677	2822	(2404)	1390870
888	26.8	8.2	4.7	chr15	99968058	99968434	(2022755)	+	MLT1G1-int	LTR/ERVL-MaLR	1063	1456	(33)	1390876
2106	18.0	13.8	0.2	chr15	99968435	99968879	(2022310)	+	MLT2B2	LTR/ERVL	1	515	(0)	1390877
193	26.2	4.7	3.2	chr15	100293766	100293828	(1697361)	+	L2a	LINE/L2	3357	3420	(6)	1391255
212	32.0	4.0	0.8	chr15	100294024	100294131	(1697058)	+	MIR	SINE/MIR	122	240	(28)	1391256
17	21.4	2.7	6.6	chr15	100341683	100341756	(1649433)	+	(GCC)n	Simple_repeat	1	76	(0)	1391323
12	27.6	0.0	0.0	chr15	100341846	100341884	(1649305)	+	(CAG)n	Simple_repeat	1	39	(0)	1391324
234	27.1	11.9	0.0	chr15	100596123	100596218	(1394971)	+	LTR33	LTR/ERVL	307	415	(100)	1391681
508	25.6	7.6	0.0	chr15	100596221	100596353	(1394836)	C	MER5A	DNA/hAT-Charlie	(0)	189	46	1391682
257	31.3	16.4	5.0	chr15	101493104	101493365	(497824)	C	L1MEd	LINE/L1	(6446)	640	343	1392856
19	25.3	2.7	7.9	chr15	101493370	101493480	(497709)	+	(TCCC)n	Simple_repeat	1	114	(0)	1392857
5086	21.6	6.1	4.2	chr15	101599122	101600766	(390423)	C	L1MD1	LINE/L1	(4746)	1887	28	1392982
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
26	0.0	0.0	0.0	chr15	101724604	101724628	(266561)	+	(GGGGC)n	Simple_repeat	1	25	(0)	1393181
5212	12.1	22.1	0.7	chr15	101979520	101980763	(10426)	+	TAR1	Satellite/telo	483	2068	(43)	1393518
328	3.1	1.9	3.2	chr15	101980765	101981189	(10000)	+	(GGTTAG)n	Simple_repeat	1	433	(0)	1393519
40	5.5	3.5	0.0	chr16	10001	10057	(90328288)	+	(TAACCC)n	Simple_repeat	1	59	(0)	1394055
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
19	16.4	1.6	6.3	chr16	381642	381703	(89956642)	+	(CCCGCC)n	Simple_repeat	1	63	(0)	1394652
45	12.9	0.0	4.3	chr16	397653	397744	(89940601)	+	G-rich	Low_complexity	1	92	(0)	1394691
243	23.5	0.0	0.0	chr16	622167	622217	(89716128)	+	L1ME4b	LINE/L1	355	405	(487)	1395028
2305	8.4	0.7	0.0	chr16	622508	622803	(89715542)	C	AluSc	SINE/Alu	(11)	298	1	1395029
635	17.8	3.2	8.0	chr16	832416	832578	(89505767)	C	AluJo	SINE/Alu	(153)	159	5	1395262
212	20.8	2.9	1.1	chr16	1075835	1076353	(89261992)	+	(CCTCTC)n	Simple_repeat	1	528	(0)	1395476
198	25.0	6.4	7.4	chr16	1092180	1092274	(89246071)	+	L2b	LINE/L2	3263	3356	(19)	1395493
13	13.6	0.0	7.9	chr16	1152609	1152646	(89185699)	+	(CCCGC)n	Simple_repeat	1	38	(0)	1395552
29	22.0	0.0	2.6	chr16	1152655	1152732	(89185613)	+	G-rich	Low_complexity	1	78	(0)	1395553
41	13.4	3.1	4.0	chr16	1153014	1153110	(89185235)	+	(CCGCC)n	Simple_repeat	1	100	(0)	1395554
9715	11.7	2.5	2.1	chr16	1797831	1798356	(88539989)	+	THE1C-int	LTR/ERVL-MaLR	367	911	(720)	1396388
2223	13.9	0.0	0.0	chr16	1798357	1798665	(88539680)	+	AluSx	SINE/Alu	2	310	(2)	1396391
2274	10.9	0.3	1.3	chr16	2021015	2021325	(88317020)	C	AluSx1	SINE/Alu	(3)	309	2	1396803
72	12.0	4.4	5.3	chr16	2104880	2105061	(88233284)	+	G-rich	Low_complexity	1	190	(0)	1396896
15	24.0	1.6	4.6	chr16	2475158	2475221	(87863124)	+	(GCGGCGC)n	Simple_repeat	1	65	(0)	1397491
72	16.0	5.0	3.1	chr16	2892860	2893041	(87445304)	+	(TA)n	Simple_repeat	1	191	(0)	1398125
2114	14.8	5.3	2.5	chr16	2893052	2893452	(87444893)	C	MER21B	LTR/ERVL	(451)	417	5	1398121
4512	10.3	2.1	2.8	chr16	3205535	3206647	(87131698)	+	MER11A	LTR/ERVK	1	1256	(10)	1398732
1954	13.8	0.7	0.3	chr16	3206878	3207163	(87131182)	+	AluSx1	SINE/Alu	1	288	(24)	1398734
34	0.0	0.0	0.0	chr16	3207164	3207195	(87131150)	+	(GGGAG)n	Simple_repeat	1	32	(0)	1398735
17	16.1	0.0	6.4	chr16	4272869	4272915	(86065430)	+	(GGC)n	Simple_repeat	1	47	(0)	1400803
60	1.8	0.0	0.0	chr16	4272948	4273003	(86065342)	+	(GT)n	Simple_repeat	1	56	(0)	1400804
19	30.2	0.0	6.4	chr16	4273125	4273233	(86065112)	+	G-rich	Low_complexity	1	109	(0)	1400805
16	0.0	0.0	0.0	chr16	4273331	4273347	(86064998)	+	(A)n	Simple_repeat	1	17	(0)	1400806
22	24.8	1.9	6.4	chr16	4315720	4315725	(86022620)	+	(CCCCCCT)n	Simple_repeat	1	14	(96)	1400931
21	15.8	5.8	4.1	chr16	4315726	4315794	(86022551)	+	(TCCC)n	Simple_repeat	1	73	(0)	1400932
22	24.8	1.9	6.4	chr16	4315795	4315827	(86022518)	+	(CCCCCCT)n	Simple_repeat	15	110	(0)	1400931
18	14.9	0.0	2.6	chr16	4315896	4315934	(86022411)	+	G-rich	Low_complexity	1	39	(0)	1400933
23	17.8	7.1	4.8	chr16	4315935	4315948	(86022397)	+	(CCTC)n	Simple_repeat	1	41	(64)	1400934
18	26.0	0.0	4.6	chr16	4315949	4316013	(86022332)	+	(CCT)n	Simple_repeat	1	65	(0)	1400935
23	17.8	7.1	4.8	chr16	4316014	4316032	(86022313)	+	(CCTC)n	Simple_repeat	42	105	(0)	1400934
247	28.4	4.0	4.0	chr16	4343926	4344024	(85994321)	C	L2c	LINE/L2	(1)	3386	3288	1400976
208	31.8	10.6	0.0	chr16	4344861	4344970	(85993375)	C	L2c	LINE/L2	(244)	3143	3021	1400976
2103	10.7	0.0	2.7	chr16	4393819	4394118	(85944227)	+	AluSx3	SINE/Alu	1	292	(19)	1401051
290	21.1	5.3	0.0	chr16	4743326	4743396	(85594949)	C	L2a	LINE/L2	(1)	3425	3351	1401761
14	16.1	1.7	10.0	chr16	4743427	4743485	(85594860)	+	(CCT)n	Simple_repeat	1	60	(0)	1401762
15	16.9	0.0	2.9	chr16	4847517	4847551	(85490794)	+	(GCG)n	Simple_repeat	1	35	(0)	1402011
19	26.5	0.0	5.1	chr16	5098644	5098722	(85239623)	+	G-rich	Low_complexity	1	79	(0)	1402557
4173	8.6	3.7	7.0	chr16	5161322	5162392	(85175953)	+	MER11A	LTR/ERVK	1	1266	(0)	1402703
382	25.2	10.9	1.6	chr16	5298148	5298272	(85040073)	C	MER102b	DNA/hAT-Charlie	(166)	175	38	1402975
162	9.6	0.8	1.9	chr16	5298427	5298683	(85039662)	+	(CTCCC)n	Simple_repeat	1	259	(0)	1402976
117	21.4	3.6	1.3	chr16	5298684	5298728	(85039617)	+	(TCCCT)n	Simple_repeat	4	316	(0)	1402977
61	36.3	2.4	0.9	chr16	5736687	5737017	(84601328)	+	(TCTCTC)n	Simple_repeat	1	339	(0)	1403898
1327	31.0	0.3	0.3	chr16	8561605	8565384	(81772961)	+	(ATGA)n	Simple_repeat	1	3790	(0)	1409287
518	22.6	2.8	7.5	chr16	8565732	8565918	(81772427)	+	MER5B	DNA/hAT-Charlie	1	178	(0)	1409288
12	8.4	0.0	6.9	chr16	9092305	9092333	(81246012)	+	(CCGGC)n	Simple_repeat	1	29	(0)	1410576
590	29.7	6.3	0.3	chr16	9200525	9200821	(81137524)	C	MER113	DNA/hAT-Charlie	(205)	316	1	1410837
2117	14.7	0.0	0.0	chr16	9201100	9201399	(81136946)	+	AluSx1	SINE/Alu	3	302	(10)	1410838
33	20.9	2.1	1.4	chr16	10039763	10039838	(80298507)	+	G-rich	Low_complexity	1	76	(0)	1412562
263	25.1	3.9	2.0	chr16	10039876	10040769	(80297576)	+	(CA)n	Simple_repeat	1	929	(0)	1412563
267	31.8	10.6	0.8	chr16	10178347	10178513	(80159832)	+	MIRc	SINE/MIR	10	191	(17)	1412839
548	30.8	8.1	1.1	chr16	10261143	10261326	(80077019)	C	MIR	SINE/MIR	(11)	251	54	1413064
2785	14.0	10.1	4.2	chr16	10261339	10261867	(80076478)	C	LTR6A	LTR/ERV1	(0)	564	1	1413065
1612	16.3	0.4	1.6	chr16	10519021	10519271	(79819074)	C	AluJr	SINE/Alu	(28)	284	37	1413608
196	15.5	9.3	4.1	chr16	10519272	10519788	(79818557)	+	(TTCC)n	Simple_repeat	2	551	(0)	1413609
2069	12.5	2.7	0.7	chr16	10519794	10520088	(79818257)	C	AluSz	SINE/Alu	(11)	301	1	1413610
12	14.9	4.9	4.7	chr16	10580554	10580594	(79757751)	+	(GCTG)n	Simple_repeat	1	43	(0)	1413754
216	30.4	7.3	1.7	chr16	10581001	10581117	(79757228)	+	MIR	SINE/MIR	32	155	(107)	1413755
262	26.3	29.5	0.0	chr16	10849012	10849243	(79489102)	C	L2	LINE/L2	(1163)	2256	1928	1414386
888	17.0	1.4	1.4	chr16	10849244	10849386	(79488959)	+	AluJb	SINE/Alu	1	143	(169)	1414389
1912	13.7	0.0	0.4	chr16	12700422	12700691	(77637654)	C	AluSx	SINE/Alu	(43)	269	1	1418429
2025	9.0	3.3	0.4	chr16	14342573	14342838	(75995507)	C	AluSq2	SINE/Alu	(39)	274	1	1421909
686	27.9	14.9	3.4	chr16	14342865	14343439	(75994906)	+	L2b	LINE/L2	2491	3139	(236)	1421910
212	16.7	2.3	4.7	chr16	14927623	14928145	(75410200)	+	(CCCTC)n	Simple_repeat	1	535	(0)	1423241
80	29.9	2.2	5.7	chr16	14928631	14929090	(75409255)	+	(CCCCAT)n	Simple_repeat	1	470	(0)	1423243
143	27.7	3.2	5.0	chr16	15131739	15132457	(75205888)	+	G-rich	Low_complexity	1	742	(0)	1423638
4006	9.7	0.4	0.8	chr16	15538931	15539461	(74798884)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1424645
2376	10.7	0.0	0.3	chr16	15539562	15539869	(74798476)	+	AluSc	SINE/Alu	1	307	(2)	1424646
236	14.6	0.8	0.2	chr16	17071455	17071976	(73266369)	+	(CTCCC)n	Simple_repeat	1	524	(0)	1428252
368	27.4	16.2	1.6	chr16	17071981	17072169	(73266176)	C	MIRb	SINE/MIR	(16)	252	31	1428253
80	31.1	2.2	6.5	chr16	18341006	18341560	(71996785)	+	GA-rich	Low_complexity	1	567	(0)	1431071
136	17.2	2.8	5.7	chr16	18342002	18342393	(71995952)	+	G-rich	Low_complexity	1	403	(0)	1431073
107	27.0	2.8	6.9	chr16	18381012	18381619	(71956726)	+	G-rich	Low_complexity	1	625	(0)	1431137
255	25.2	13.4	3.7	chr16	19393475	19393581	(70944764)	C	L2a	LINE/L2	(799)	2620	2502	1433464
4967	4.8	0.3	0.0	chr16	19393582	19394166	(70944179)	C	LTR14C	LTR/ERVK	(0)	587	1	1433467
4708	8.4	2.2	1.8	chr16	19543135	19544242	(70794103)	+	MER11A	LTR/ERVK	1	1266	(0)	1433805
13	22.5	2.0	3.9	chr16	21278385	21278434	(69059911)	+	(CCCCG)n	Simple_repeat	1	51	(0)	1437565
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
14	25.3	1.6	4.8	chr16	21599902	21599963	(68738382)	+	G-rich	Low_complexity	1	63	(0)	1438247
7670	7.5	7.8	0.2	chr16	21629456	21630507	(68707838)	C	LTR12D	LTR/ERV1	(115)	1139	1	1438291
6546	5.6	0.5	0.4	chr16	21630508	21631301	(68707044)	C	HERV9NC-int	LTR/ERV1	(0)	8436	7642	1438291
17	16.7	6.4	0.0	chr16	22007899	22007945	(68330400)	+	G-rich	Low_complexity	1	50	(0)	1439104
2404	13.4	7.3	2.5	chr16	22296150	22296419	(68041926)	C	MSTC	LTR/ERVL-MaLR	(0)	428	166	1439783
28	5.8	0.0	0.0	chr16	22296420	22296455	(68041890)	+	(CCATTAAT)n	Simple_repeat	1	36	(0)	1439784
2404	13.4	7.3	2.5	chr16	22296456	22296589	(68041756)	C	MSTC	LTR/ERVL-MaLR	(263)	165	4	1439783
1302	16.2	7.1	1.3	chr16	22335347	22335561	(68002784)	+	L1MA9	LINE/L1	471	701	(6788)	1439853
35	0.0	0.0	0.0	chr16	22335562	22335591	(68002754)	+	(GA)n	Simple_repeat	1	30	(0)	1439854
1302	16.2	7.1	1.3	chr16	22335592	22335613	(68002732)	+	L1MA9	LINE/L1	702	723	(6766)	1439853
4282	22.1	8.1	9.2	chr16	22335621	22338774	(67999571)	+	L1MA9	LINE/L1	1673	4542	(3020)	1439853
12	23.9	0.0	0.0	chr16	22437078	22437112	(67901233)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	1440063
22	24.3	0.0	1.7	chr16	22437242	22437301	(67901044)	+	(TCC)n	Simple_repeat	1	60	(0)	1440064
30	26.7	3.1	1.0	chr16	22627538	22627633	(67710712)	+	GA-rich	Low_complexity	1	99	(0)	1440473
1673	15.1	3.6	5.1	chr16	22627652	22627962	(67710383)	+	AluJr	SINE/Alu	3	308	(4)	1440474
252	17.2	1.7	0.0	chr16	22940116	22940173	(67398172)	+	L1PB4	LINE/L1	5966	6024	(132)	1441141
264	17.2	1.7	0.0	chr16	22940167	22940224	(67398121)	+	L1PB4	LINE/L1	5966	6024	(132)	1441141
247	17.0	0.0	0.0	chr16	22940218	22940264	(67398081)	+	L1PB4	LINE/L1	5966	6012	(144)	1441141
1178	13.7	0.5	4.0	chr16	22940269	22940466	(67397879)	+	L1PB4	LINE/L1	5966	6156	(0)	1441142
1784	19.8	0.6	1.3	chr16	24332181	24332493	(66005852)	+	AluJr	SINE/Alu	1	311	(1)	1444416
1291	24.3	14.6	8.8	chr16	24332645	24333361	(66004984)	+	Tigger18a	DNA/TcMar-Tigger	5	770	(82)	1444417
2396	9.5	0.7	0.0	chr16	24415867	24416172	(65922173)	C	AluSp	SINE/Alu	(5)	308	1	1444625
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
1706	20.4	2.9	10.9	chr16	25587554	25588004	(64750341)	+	MER41C	LTR/ERV1	1	414	(107)	1447305
65	9.8	5.6	0.8	chr16	25588005	25588038	(64750307)	+	(TTCT)n	Simple_repeat	1	34	(0)	1447306
107	2.0	0.0	0.0	chr16	25588039	25588141	(64750204)	+	(CCCCTCCCTT)n	Simple_repeat	1	103	(0)	1447307
65	9.8	5.6	0.8	chr16	25588142	25588231	(64750114)	+	(TTCT)n	Simple_repeat	3	98	(0)	1447308
1761	20.9	7.5	6.2	chr16	25588232	25588255	(64750090)	+	MER4B	LTR/ERV1	264	287	(479)	1447309
1501	17.3	0.4	1.2	chr16	25588256	25588503	(64749842)	C	AluJo	SINE/Alu	(34)	278	33	1447310
1144	27.7	6.6	6.9	chr16	27375088	27375598	(62962747)	+	MLT1K	LTR/ERVL-MaLR	23	519	(76)	1451020
1906	15.7	0.0	1.4	chr16	27922794	27923086	(62415259)	C	AluJr	SINE/Alu	(22)	290	2	1452239
1684	13.5	3.5	3.8	chr16	28123115	28123403	(62214942)	C	AluJb	SINE/Alu	(22)	290	3	1452699
80	19.6	5.5	0.2	chr16	28470494	28470720	(61867625)	+	G-rich	Low_complexity	1	238	(0)	1453607
22	0.0	0.0	0.0	chr16	28822936	28822959	(61515386)	+	(C)n	Simple_repeat	1	24	(0)	1454525
15	8.9	0.0	0.0	chr16	28823492	28823515	(61514830)	+	(CGC)n	Simple_repeat	1	24	(0)	1454526
293	29.4	1.2	2.0	chr16	28846883	28846991	(61491354)	+	MIRb	SINE/MIR	114	220	(10)	1454566
26	0.0	0.0	0.0	chr16	28863894	28863918	(61474427)	+	(GCC)n	Simple_repeat	1	25	(0)	1454616
11	9.7	8.6	2.6	chr16	28879981	28880015	(61458330)	+	(GCCCCT)n	Simple_repeat	1	38	(0)	1454637
28	0.0	3.3	0.0	chr16	28925338	28925367	(61412978)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	1454764
334	32.0	21.9	3.0	chr16	28925804	28926170	(61412175)	+	L2	LINE/L2	2357	2812	(607)	1454765
41	4.5	0.0	0.0	chr16	29595078	29595123	(60743222)	+	(GAG)n	Simple_repeat	1	46	(0)	1456054
13	23.9	0.0	0.0	chr16	29595282	29595316	(60743029)	+	GA-rich	Low_complexity	1	35	(0)	1456055
6766	12.4	5.0	6.6	chr16	29782762	29784049	(60554296)	+	MER11A	LTR/ERVK	1	1266	(0)	1456558
833	23.7	0.0	0.0	chr16	29784060	29784211	(60554134)	+	AluJo	SINE/Alu	148	299	(13)	1456559
20	16.1	5.3	1.7	chr16	29805896	29805952	(60532393)	+	(CTCGCG)n	Simple_repeat	1	60	(0)	1456607
24	25.6	2.1	3.2	chr16	29806010	29806102	(60532243)	+	(CCCCTC)n	Simple_repeat	1	95	(0)	1456608
25	18.8	0.0	0.0	chr16	29810099	29810149	(60528196)	+	(GGCAGC)n	Simple_repeat	1	51	(0)	1456613
13	16.8	0.0	5.4	chr16	29899618	29899654	(60438691)	+	GA-rich	Low_complexity	1	37	(0)	1456816
222	20.4	22.1	0.0	chr16	29962426	29962513	(60375832)	+	MIRc	SINE/MIR	20	132	(136)	1456977
18	37.2	0.0	0.0	chr16	30011140	30011212	(60327133)	+	(GC)n	Simple_repeat	1	73	(0)	1457057
15	27.5	0.0	0.0	chr16	30011439	30011488	(60326857)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	1457058
21	27.9	3.5	1.1	chr16	30370286	30370370	(59967975)	+	(GGCGC)n	Simple_repeat	1	88	(0)	1457867
38	20.4	1.2	0.0	chr16	30378822	30378906	(59959439)	+	G-rich	Low_complexity	1	86	(0)	1457880
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
16	19.6	0.0	5.8	chr16	30526709	30526760	(59811585)	+	(GCCCCC)n	Simple_repeat	1	52	(0)	1458285
15	7.0	2.9	5.7	chr16	30527310	30527343	(59811002)	+	(CTC)n	Simple_repeat	1	35	(0)	1458286
3688	6.0	1.9	0.0	chr16	30559532	30559985	(59778360)	C	LTR2	LTR/ERV1	(0)	463	1	1458332
317	19.5	4.9	0.0	chr16	30559989	30560065	(59778280)	C	MER34D	LTR/ERV1	(0)	579	499	1458333
655	19.5	0.9	0.0	chr16	30560070	30560182	(59778163)	+	FLAM_A	SINE/Alu	19	132	(10)	1458334
1683	18.5	9.6	4.8	chr16	30560212	30560357	(59777988)	C	MER34D	LTR/ERV1	(75)	504	354	1458333
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
19	0.0	0.0	0.0	chr16	30698719	30698742	(59639603)	+	(GAGC)n	Simple_repeat	1	24	(0)	1458688
17	17.2	0.0	2.4	chr16	31073753	31073793	(59264552)	+	G-rich	Low_complexity	1	41	(0)	1459562
214	30.7	1.1	12.0	chr16	31529236	31529335	(58809010)	C	L3	LINE/CR1	(6)	4093	4005	1460509
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
1588	14.5	0.3	0.7	chr16	33571457	33571747	(56766598)	C	TAR1	Satellite/telo	(297)	1814	1525	1462831
304	35.8	10.2	4.5	chr16	33572050	33572315	(56766030)	C	L1MEd	LINE/L1	(6239)	847	565	1462832
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
236	28.8	1.5	1.5	chr16	47038395	47038461	(43299884)	+	MIR	SINE/MIR	82	148	(114)	1466606
13	21.4	2.6	0.0	chr16	48384646	48384683	(41953662)	+	(GCCGAGG)n	Simple_repeat	1	39	(0)	1468646
28	19.2	0.0	4.2	chr16	49281723	49281793	(41056552)	+	(GCC)n	Simple_repeat	1	71	(0)	1470270
348	22.9	1.0	1.0	chr16	49477064	49477848	(40860497)	+	GA-rich	Low_complexity	1	793	(0)	1470595
14	12.6	5.7	0.0	chr16	49833576	49833610	(40504735)	+	(CTCCCAC)n	Simple_repeat	1	37	(0)	1471207
32	12.8	7.6	1.2	chr16	49855654	49855732	(40482613)	+	(GCTC)n	Simple_repeat	1	85	(0)	1471240
13	13.3	9.3	2.1	chr16	49855794	49855836	(40482509)	+	(CCG)n	Simple_repeat	1	47	(0)	1471241
14	23.3	3.1	6.0	chr16	51148994	51149058	(39189287)	+	GA-rich	Low_complexity	1	67	(0)	1473825
16	0.0	0.0	0.0	chr16	51151315	51151335	(39187010)	+	(GCG)n	Simple_repeat	1	67	(0)	1473827
18	22.7	0.0	0.0	chr16	51151336	51151381	(39186964)	+	(CCGC)n	Simple_repeat	1	46	(0)	1473828
1665	18.5	2.9	0.0	chr16	51940671	51940940	(38397405)	+	AluJo	SINE/Alu	5	282	(30)	1475216
1585	15.9	0.3	0.0	chr16	51941161	51941443	(38396902)	+	L1MA4	LINE/L1	5998	6281	(19)	1475217
14	18.3	2.7	0.0	chr16	53099565	53099601	(37238744)	+	(TCCTTCC)n	Simple_repeat	1	38	(0)	1477231
234	29.3	2.6	1.3	chr16	53503989	53504064	(36834281)	+	MER5A	DNA/hAT-Charlie	112	188	(1)	1477954
13	9.3	0.0	0.0	chr16	54115257	54115279	(36223066)	+	(CCCT)n	Simple_repeat	1	23	(0)	1478912
187	22.1	6.8	8.1	chr16	54115811	54115884	(36222461)	C	UCON132b	DNA/hAT-Tip100	(72)	76	4	1478913
21	9.8	0.0	0.0	chr16	54286211	54286243	(36052102)	+	(GCG)n	Simple_repeat	1	33	(0)	1479232
24	23.2	7.4	2.3	chr16	54286378	54286498	(36051847)	+	(CGCTCCT)n	Simple_repeat	1	130	(0)	1479233
14	12.2	8.1	0.0	chr16	54286558	54286594	(36051751)	+	(CTCTCCT)n	Simple_repeat	1	40	(0)	1479234
18	3.4	0.0	8.3	chr16	54286943	54286980	(36051365)	+	(GCGGG)n	Simple_repeat	1	34	(0)	1479235
22	23.9	6.8	0.0	chr16	54928778	54928851	(35409494)	+	(CG)n	Simple_repeat	1	79	(0)	1480395
11	23.1	1.7	6.8	chr16	54931059	54931116	(35407229)	+	(GGCCAGA)n	Simple_repeat	1	59	(0)	1480396
20	23.8	3.6	3.5	chr16	56191467	56191550	(34146795)	+	(TCCCTC)n	Simple_repeat	1	87	(0)	1482660
32	20.2	1.3	1.3	chr16	56191748	56191823	(34146522)	+	(CCG)n	Simple_repeat	1	77	(0)	1482661
11	18.7	4.3	4.2	chr16	56193219	56193264	(34145081)	+	G-rich	Low_complexity	1	48	(0)	1482664
14	22.0	2.4	0.0	chr16	56424720	56424761	(33913584)	+	(CCTGCCC)n	Simple_repeat	1	43	(0)	1483023
326	29.3	8.4	4.1	chr16	56451994	56452164	(33886181)	+	MIRb	SINE/MIR	3	181	(87)	1483064
13	7.7	0.0	9.1	chr16	57092510	57092542	(33245803)	+	(CCTCC)n	Simple_repeat	1	33	(0)	1484334
18	0.0	0.0	6.9	chr16	57092565	57092593	(33245752)	+	(GCC)n	Simple_repeat	1	29	(0)	1484335
263	32.5	0.1	1.2	chr16	57446966	57447064	(32891281)	C	MIRc	SINE/MIR	(165)	103	5	1485090
501	26.6	11.3	1.7	chr16	57447958	57448236	(32890109)	C	MER113	DNA/hAT-Charlie	(0)	521	11	1485091
437	30.3	5.0	4.1	chr16	57505181	57505446	(32832899)	C	L2a	LINE/L2	(313)	3113	2855	1485197
336	30.3	6.0	10.9	chr16	57505444	57505654	(32832691)	+	MIRb	SINE/MIR	29	228	(40)	1485199
77	29.4	4.1	1.5	chr16	57679943	57680262	(32658083)	+	(TCCTC)n	Simple_repeat	1	333	(0)	1485559
544	28.7	9.7	3.9	chr16	58236215	58236696	(32101649)	C	LTR33	LTR/ERVL	(2)	513	1	1486703
349	17.9	0.0	0.0	chr16	58586155	58586210	(31752135)	C	AluYk11	SINE/Alu	(254)	57	2	1487374
127	8.0	1.7	5.0	chr16	58586240	58586473	(31751872)	+	(GAGGG)n	Simple_repeat	1	238	(0)	1487375
1685	16.1	7.3	0.6	chr16	62201884	62202201	(28136144)	C	MER61A	LTR/ERV1	(0)	341	1	1493036
233	21.9	17.6	0.0	chr16	66552063	66552149	(23786196)	C	L2a	LINE/L2	(28)	3398	3263	1499951
11	27.1	2.3	0.0	chr16	66741681	66741724	(23596621)	+	(CTGCCC)n	Simple_repeat	1	45	(0)	1500320
15	18.3	7.5	4.2	chr16	66751661	66751727	(23586618)	+	(GCC)n	Simple_repeat	1	72	(0)	1500336
13	28.9	1.4	5.3	chr16	66751777	66751850	(23586495)	+	(GGC)n	Simple_repeat	1	75	(0)	1500337
2186	11.3	0.3	1.3	chr16	67281212	67281521	(23056824)	C	AluSx1	SINE/Alu	(1)	311	5	1501371
385	31.1	7.5	0.0	chr16	67305300	67305460	(23032885)	C	MIRc	SINE/MIR	(1)	267	94	1501391
18	14.8	7.4	1.7	chr16	67652857	67652910	(22685435)	+	(GCG)n	Simple_repeat	1	58	(0)	1502110
14	14.4	5.0	2.4	chr16	68520940	68520979	(21817366)	+	(CAGGCC)n	Simple_repeat	1	42	(0)	1503687
258	27.6	12.5	0.0	chr16	68521099	68521196	(21817149)	C	MIR3	SINE/MIR	(44)	164	53	1503688
1016	27.9	7.3	7.8	chr16	68843233	68843428	(21494917)	+	MER20B	DNA/hAT-Charlie	485	686	(97)	1504476
180	26.1	0.0	0.0	chr16	68843925	68843970	(21494375)	C	MIR	SINE/MIR	(1)	261	216	1504478
291	29.7	0.0	5.1	chr16	68844286	68844402	(21493943)	C	MIR3	SINE/MIR	(63)	145	35	1504479
13	14.0	4.7	4.4	chr16	69565635	69565677	(20772668)	+	(CTCTG)n	Simple_repeat	1	45	(0)	1506104
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
14	4.5	0.0	0.0	chr16	69849465	69849482	(20488863)	+	(TTAT)n	Simple_repeat	1	18	(0)	1506731
17	19.3	2.0	3.9	chr16	70686106	70686156	(19652189)	+	GA-rich	Low_complexity	1	52	(0)	1508508
25	19.9	1.5	2.9	chr16	71289614	71289681	(19048664)	+	G-rich	Low_complexity	1	69	(0)	1509393
635	28.2	6.2	7.0	chr16	71289888	71290177	(19048168)	+	L1M5	LINE/L1	5283	5581	(543)	1509394
17	13.1	0.0	0.0	chr16	71626455	71626480	(18711865)	+	(GA)n	Simple_repeat	1	26	(0)	1510047
23	21.6	0.0	0.0	chr16	71723696	71723749	(18614596)	+	(CTCG)n	Simple_repeat	1	54	(0)	1510238
17	24.6	1.4	5.3	chr16	71884005	71884078	(18454267)	+	(GCCGG)n	Simple_repeat	1	75	(0)	1510563
14	8.9	11.1	0.0	chr16	71884098	71884133	(18454212)	+	(CAGA)n	Simple_repeat	1	40	(0)	1510564
15	24.6	0.0	0.0	chr16	71884210	71884252	(18454093)	+	(CCTCCC)n	Simple_repeat	1	43	(0)	1510565
2468	7.0	0.7	0.0	chr16	71884856	71885155	(18453190)	C	AluSx	SINE/Alu	(10)	302	1	1510566
18	0.0	0.0	0.0	chr16	73055679	73055698	(17282647)	+	(CG)n	Simple_repeat	1	20	(0)	1512333
40	2.6	0.0	0.0	chr16	73055699	73055737	(17282608)	+	(CA)n	Simple_repeat	1	39	(0)	1512334
2257	9.7	1.0	0.0	chr16	74865629	74865918	(15472427)	+	AluSp	SINE/Alu	2	294	(19)	1515617
28	15.8	8.3	1.9	chr16	74865919	74865952	(15472393)	+	G-rich	Low_complexity	1	35	(0)	1515618
61	3.2	0.0	0.0	chr16	74865953	74866016	(15472329)	+	(AGGGG)n	Simple_repeat	1	64	(0)	1515619
17	29.6	3.0	3.9	chr16	74866017	74866081	(15472264)	+	G-rich	Low_complexity	33	98	(0)	1515620
1415	18.4	4.2	1.4	chr16	74866083	74866363	(15471982)	C	L1MD2	LINE/L1	(69)	6290	6002	1515621
1426	17.6	10.1	5.9	chr16	74866395	74866733	(15471612)	C	LTR8A	LTR/ERV1	(1)	726	372	1515622
194	19.7	14.3	1.5	chr16	75432800	75432866	(14905479)	+	L3	LINE/CR1	3852	3928	(171)	1516786
1333	27.8	2.8	2.3	chr16	77807207	77807640	(12530705)	+	LTR16	LTR/ERVL	1	436	(2)	1520522
378	30.8	1.6	0.0	chr16	78002861	78002980	(12335365)	+	MamRep4096	DNA/hAT-Tip100	255	376	(50)	1520932
457	27.8	5.7	1.1	chr16	81718989	81719167	(8619178)	C	MLT1C	LTR/ERVL-MaLR	(20)	447	278	1527846
75	22.8	0.0	0.0	chr16	81719350	81719517	(8618828)	+	(TCCCG)n	Simple_repeat	1	168	(0)	1527847
1765	18.0	0.0	0.7	chr16	81719527	81719804	(8618541)	C	AluJb	SINE/Alu	(36)	276	1	1527848
17	10.7	0.0	3.1	chr16	83979681	83979712	(6358633)	+	(GAG)n	Simple_repeat	1	32	(0)	1531963
268	30.6	3.1	3.1	chr16	83979825	83979986	(6358359)	+	MER103C	DNA/hAT-Charlie	1	162	(135)	1531964
1739	15.3	2.3	2.7	chr16	84435544	84435844	(5902501)	+	AluJb	SINE/Alu	1	300	(12)	1532836
2132	12.8	0.0	0.0	chr16	84435847	84436135	(5902210)	+	AluSz	SINE/Alu	1	289	(23)	1532837
77	29.6	3.0	5.7	chr16	84618272	84618768	(5719577)	+	(CCTCTC)n	Simple_repeat	1	512	(0)	1533213
11	18.3	5.0	2.4	chr16	85029617	85029656	(5308689)	+	(TCTCTCC)n	Simple_repeat	1	42	(0)	1534049
451	32.5	7.6	1.4	chr16	85029797	85030005	(5308340)	C	MIRc	SINE/MIR	(29)	239	17	1534050
368	30.8	2.5	1.7	chr16	85057531	85057649	(5280696)	C	L2a	LINE/L2	(9)	3417	3298	1534108
24	20.1	5.3	1.2	chr16	85169027	85169102	(5169243)	+	GA-rich	Low_complexity	1	80	(0)	1534321
27	12.7	6.9	2.6	chr16	85169107	85169178	(5169167)	+	(CCCG)n	Simple_repeat	1	77	(0)	1534322
41	0.0	0.0	0.0	chr16	85169251	85169287	(5169058)	+	(CCG)n	Simple_repeat	1	37	(0)	1534323
723	31.4	6.4	3.8	chr16	85227795	85228329	(5110016)	C	L2b	LINE/L2	(0)	3375	2830	1534438
442	35.1	7.6	2.1	chr16	85228409	85228644	(5109701)	+	MIRb	SINE/MIR	5	254	(14)	1534439
34	0.0	0.0	0.0	chr16	85627045	85627076	(4711269)	+	(T)n	Simple_repeat	1	32	(0)	1535155
372	12.7	3.1	0.0	chr16	85990690	85990752	(4347593)	C	L4_C_Mam	LINE/RTE-X	(194)	4944	4880	1535812
12	14.9	8.1	0.0	chr16	86510202	86510238	(3828107)	+	(CGGCCT)n	Simple_repeat	1	40	(0)	1536781
14	29.0	3.2	1.6	chr16	86510251	86510312	(3828033)	+	G-rich	Low_complexity	1	64	(0)	1536782
14	13.0	5.9	0.0	chr16	86510351	86510384	(3827961)	+	G-rich	Low_complexity	1	36	(0)	1536782
27	3.5	0.0	0.0	chr16	86510482	86510511	(3827834)	+	(TCC)n	Simple_repeat	1	30	(0)	1536783
19	20.8	1.7	1.7	chr16	86510512	86510563	(3827782)	+	(CGGCGG)n	Simple_repeat	6	57	(0)	1536784
28	5.3	2.6	0.0	chr16	86510605	86510643	(3827702)	+	(CGG)n	Simple_repeat	1	40	(0)	1536785
11	11.6	7.3	4.5	chr16	86572737	86572777	(3765568)	+	(AAGACAG)n	Simple_repeat	1	44	(0)	1536866
18	17.5	0.0	0.0	chr16	86762119	86762150	(3576195)	+	(T)n	Simple_repeat	1	32	(0)	1537193
303	30.0	6.8	5.1	chr16	86762496	86762653	(3575692)	C	Charlie4z	DNA/hAT-Charlie	(4)	163	3	1537194
75	2.1	0.0	4.6	chr16	86986873	86986980	(3351365)	+	(GGGAG)n	Simple_repeat	1	108	(0)	1537598
13	13.9	2.9	2.9	chr16	87383065	87383098	(2955247)	+	(CCCGGC)n	Simple_repeat	1	35	(0)	1538338
12	21.3	2.5	2.4	chr16	87383530	87383569	(2954776)	+	(GGC)n	Simple_repeat	1	41	(0)	1538339
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
331	35.4	3.6	2.4	chr16	87613764	87613928	(2724417)	C	MIRb	SINE/MIR	(16)	252	86	1538787
364	23.0	1.5	0.0	chr16	87614005	87614102	(2724243)	C	MIR3	SINE/MIR	(59)	149	55	1538788
208	19.3	2.0	0.7	chr16	87700458	87700910	(2637435)	+	GA-rich	Low_complexity	1	462	(0)	1538927
12	12.4	8.6	0.0	chr16	88784898	88784932	(1553413)	+	(CAGCAGC)n	Simple_repeat	1	38	(0)	1540422
13	16.9	0.0	0.0	chr16	88785075	88785101	(1553244)	+	(CCT)n	Simple_repeat	1	27	(0)	1540423
58	19.9	3.0	3.0	chr16	88889267	88889430	(1448915)	+	G-rich	Low_complexity	1	169	(0)	1540557
312	28.4	13.2	2.3	chr16	88889499	88889649	(1448696)	+	MIRb	SINE/MIR	13	181	(87)	1540558
2146	13.4	0.0	0.0	chr16	88971112	88971409	(1366936)	C	AluSz6	SINE/Alu	(14)	298	1	1540652
279	31.6	9.7	0.0	chr16	89006354	89006549	(1331796)	C	LTR16C	LTR/ERVL	(21)	468	252	1540692
780	11.3	15.9	1.2	chr16	89146987	89147147	(1191198)	C	MSTA	LTR/ERVL-MaLR	(48)	380	192	1540837
993	14.0	10.7	1.0	chr16	89147565	89147766	(1190579)	C	MSTA	LTR/ERVL-MaLR	(203)	225	2	1540837
3356	14.0	2.1	5.0	chr16	89147768	89148093	(1190252)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1322	1540837
15	23.0	0.0	5.4	chr16	89167665	89167720	(1170625)	+	(GCCCCCA)n	Simple_repeat	1	56	(0)	1540854
232	19.1	3.5	5.6	chr16	89571337	89571425	(766920)	C	LTR33C	LTR/ERVL	(332)	297	211	1541492
235	27.2	7.7	1.4	chr16	89577204	89577342	(761003)	+	MIRb	SINE/MIR	9	159	(49)	1541497
569	23.8	6.4	0.0	chr16	89618758	89618904	(719441)	C	MER45B	DNA/hAT-Tip100	(296)	744	588	1541555
12	30.4	1.2	5.8	chr16	89721182	89721266	(617079)	+	(CCCCCGC)n	Simple_repeat	1	86	(0)	1541726
23	15.9	1.3	7.9	chr16	89721474	89721548	(616797)	+	(CCCGC)n	Simple_repeat	1	76	(0)	1541727
321	32.6	4.0	5.8	chr17	304610	304814	(82952627)	C	Cheshire	DNA/hAT-Charlie	(2150)	270	70	1544955
350	31.3	9.7	4.4	chr17	319700	319836	(82937605)	C	L2b	LINE/L2	(1)	3374	3230	1544977
1781	18.4	0.6	2.9	chr17	320354	320669	(82936772)	+	AluJr	SINE/Alu	1	309	(3)	1544978
213	27.2	3.2	12.4	chr17	751680	751784	(82505657)	C	MIR	SINE/MIR	(89)	173	79	1545736
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
272	33.5	3.5	6.3	chr17	878139	878377	(82379064)	C	L2b	LINE/L2	(222)	3153	2922	1545951
38	28.2	0.7	2.9	chr17	878399	878537	(82378904)	+	G-rich	Low_complexity	1	140	(0)	1545953
2002	9.7	4.0	0.3	chr17	902780	903069	(82354372)	C	AluSp	SINE/Alu	(12)	301	1	1546001
23	12.3	4.5	1.0	chr17	1109117	1109165	(82148276)	+	GA-rich	Low_complexity	1	50	(0)	1546365
16	0.0	0.0	0.0	chr17	1109234	1109253	(82148188)	+	(CCG)n	Simple_repeat	1	20	(0)	1546366
13	0.0	14.3	0.0	chr17	1268404	1268431	(81989010)	+	(CCCG)n	Simple_repeat	1	32	(0)	1546738
2426	6.0	0.6	1.6	chr17	1268681	1268995	(81988446)	C	AluSx1	SINE/Alu	(0)	312	1	1546739
17	10.8	10.8	4.2	chr17	1562588	1562652	(81694789)	+	(CGGCC)n	Simple_repeat	1	72	(0)	1547358
13	21.1	2.6	0.0	chr17	1628733	1628770	(81628671)	+	(GCGCCC)n	Simple_repeat	1	39	(0)	1547494
16	23.7	1.4	6.8	chr17	2025191	2025263	(81232178)	+	(CGC)n	Simple_repeat	1	74	(0)	1548315
31	14.6	2.4	5.8	chr17	2025349	2025433	(81232008)	+	(CCTC)n	Simple_repeat	1	87	(0)	1548316
13	29.8	0.0	0.0	chr17	2392861	2392905	(80864536)	+	G-rich	Low_complexity	1	45	(0)	1549013
14	10.7	3.1	3.0	chr17	2400771	2400802	(80856639)	+	(CAGG)n	Simple_repeat	1	33	(0)	1549023
17	19.6	0.0	5.8	chr17	2400961	2401012	(80856429)	+	(CTCC)n	Simple_repeat	1	52	(0)	1549024
309	32.6	2.8	3.2	chr17	2570812	2571061	(80686380)	+	L1M5	LINE/L1	4586	4834	(1312)	1549472
14	8.1	0.0	3.6	chr17	2593500	2593572	(80663869)	+	(GCCCG)n	Simple_repeat	1	70	(0)	1549530
30	0.0	0.0	0.0	chr17	2593591	2593618	(80663823)	+	(GGC)n	Simple_repeat	1	28	(0)	1549531
14	7.8	3.5	3.3	chr17	2593667	2593695	(80663746)	+	(GCG)n	Simple_repeat	1	30	(0)	1549532
30	19.8	9.2	0.0	chr17	2593836	2593944	(80663497)	+	(CCCT)n	Simple_repeat	1	119	(0)	1549533
22	15.5	5.7	4.0	chr17	2594105	2594174	(80663267)	+	(TCC)n	Simple_repeat	1	74	(0)	1549534
353	30.1	5.5	0.0	chr17	2786212	2786314	(80471127)	C	MIR3	SINE/MIR	(68)	140	32	1549946
2290	9.7	0.0	2.8	chr17	2786626	2786946	(80470495)	C	AluSz	SINE/Alu	(0)	312	1	1549947
83	13.3	0.7	0.7	chr17	2830929	2831069	(80426372)	+	(CCTCC)n	Simple_repeat	1	141	(0)	1550055
2358	11.1	0.7	0.0	chr17	2831070	2831376	(80426065)	C	AluSx1	SINE/Alu	(3)	309	1	1550056
554	26.0	15.7	0.0	chr17	3846534	3846710	(79410731)	C	MIR	SINE/MIR	(2)	260	51	1551858
2127	19.5	9.9	3.4	chr17	5190695	5191220	(78066221)	+	LTR6A	LTR/ERV1	1	564	(0)	1554576
242	25.7	1.4	0.0	chr17	5281840	5281909	(77975532)	C	MIRc	SINE/MIR	(144)	124	54	1554824
14	0.0	0.0	0.0	chr17	5282377	5282394	(77975047)	+	(GGC)n	Simple_repeat	1	18	(0)	1554825
457	28.0	2.2	0.8	chr17	6308114	6308246	(76949195)	C	LTR16C	LTR/ERVL	(0)	489	355	1556818
22	19.0	0.0	0.0	chr17	6308348	6308389	(76949052)	+	(T)n	Simple_repeat	1	42	(0)	1556819
2376	8.2	1.0	0.3	chr17	6308398	6308700	(76948741)	C	AluSc	SINE/Alu	(4)	305	1	1556820
29	5.6	0.0	0.0	chr17	6455650	6455686	(76801755)	+	(AGGGC)n	Simple_repeat	1	37	(0)	1557124
45	21.5	3.9	1.5	chr17	6455693	6455822	(76801619)	+	G-rich	Low_complexity	1	135	(0)	1557125
2159	11.3	0.7	2.6	chr17	6490674	6490982	(76766459)	+	AluSx1	SINE/Alu	1	303	(9)	1557186
92	11.7	0.0	0.7	chr17	6490983	6491127	(76766314)	+	(GGGGA)n	Simple_repeat	1	145	(0)	1557187
248	36.6	1.5	3.0	chr17	6491128	6491262	(76766179)	+	L3	LINE/CR1	2825	2957	(1142)	1557185
2254	14.9	5.4	0.5	chr17	7068932	7069335	(76188106)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	1558167
17	13.3	0.0	0.0	chr17	7394190	7394222	(75863219)	+	(AGACAG)n	Simple_repeat	1	33	(0)	1558757
14	12.8	0.0	7.5	chr17	7394560	7394599	(75862842)	+	(CCCCGC)n	Simple_repeat	1	40	(0)	1558758
232	30.5	3.6	9.9	chr17	7548612	7548822	(75708619)	+	MER21A	LTR/ERVL	114	310	(621)	1559064
15	9.2	8.6	0.0	chr17	7549229	7549277	(75708164)	+	G-rich	Low_complexity	1	53	(0)	1559065
16	18.6	6.1	0.0	chr17	7614616	7614664	(75642777)	+	(CCGGAG)n	Simple_repeat	1	52	(0)	1559152
41	33.8	1.1	2.1	chr17	7614701	7614891	(75642550)	+	(GCC)n	Simple_repeat	1	193	(0)	1559153
12	23.6	2.4	8.3	chr17	7634855	7634936	(75622505)	+	(CCTAGCC)n	Simple_repeat	1	84	(0)	1559204
19	23.1	5.2	3.7	chr17	8210229	8210305	(75047136)	+	GA-rich	Low_complexity	1	81	(0)	1560323
2406	8.2	1.0	0.0	chr17	8247306	8247608	(75009833)	C	AluSz	SINE/Alu	(6)	306	1	1560402
2221	8.5	0.3	6.4	chr17	8248232	8248560	(75008881)	C	AluSx1	SINE/Alu	(3)	309	1	1560403
261	35.0	14.7	3.5	chr17	8443150	8443538	(74813903)	C	L2c	LINE/L2	(5)	3382	2947	1560849
2209	10.4	1.3	1.0	chr17	8596154	8596451	(74660990)	C	AluSx	SINE/Alu	(13)	299	1	1561054
375	31.4	12.7	4.2	chr17	8596452	8596545	(74660896)	C	L1MC4	LINE/L1	(4048)	2167	2077	1561053
23	14.0	3.4	3.3	chr17	8596632	8596690	(74660751)	+	G-rich	Low_complexity	1	61	(0)	1561055
14	11.6	0.0	3.3	chr17	8745929	8745958	(74511483)	+	(CTCC)n	Simple_repeat	1	30	(0)	1561383
14	29.6	0.0	3.3	chr17	8746014	8746074	(74511367)	+	G-rich	Low_complexity	1	61	(0)	1561384
52	3.7	0.0	0.0	chr17	8746832	8746887	(74510554)	+	(TTCCC)n	Simple_repeat	1	56	(0)	1561385
471	34.3	6.0	2.9	chr17	13024181	13024420	(70233021)	C	MIR	SINE/MIR	(4)	258	11	1569062
199	29.8	10.5	0.0	chr17	13304323	13304416	(69953025)	+	MIR	SINE/MIR	77	181	(81)	1569558
49	0.0	0.0	0.0	chr17	14300434	14300475	(68956966)	+	(AC)n	Simple_repeat	1	42	(0)	1571198
418	30.0	0.8	0.0	chr17	14827917	14828036	(68429405)	+	MIR3	SINE/MIR	70	190	(18)	1572107
3134	20.9	2.1	2.1	chr17	14976899	14977571	(68279870)	C	L1MC3	LINE/L1	(1)	7994	7322	1572317
343	20.9	3.1	0.5	chr17	15464933	15465748	(67791693)	+	(AC)n	Simple_repeat	1	841	(0)	1573084
19	4.6	7.5	7.0	chr17	15466023	15466075	(67791366)	+	GA-rich	Low_complexity	1	57	(0)	1573085
283	22.3	9.0	1.0	chr17	15466152	15466234	(67791207)	C	MIR	SINE/MIR	(179)	89	2	1573086
240	1.6	0.0	3.7	chr17	15749830	15750098	(67507343)	+	(GGCTGAGG)n	Simple_repeat	1	269	(0)	1573598
2110	15.0	0.7	2.9	chr17	16035528	16035841	(67221600)	C	AluJb	SINE/Alu	(5)	307	1	1574103
12177	11.5	7.1	0.6	chr17	16035842	16037445	(67219996)	C	Tigger1	DNA/TcMar-Tigger	(693)	1725	1	1574102
1221	13.0	0.0	5.8	chr17	16539541	16539745	(66717696)	+	LTR9B	LTR/ERV1	452	644	(0)	1575188
148	4.5	0.8	6.8	chr17	16667227	16667488	(66589953)	+	(GGCTGAGG)n	Simple_repeat	1	264	(0)	1575377
184	16.1	0.0	0.0	chr17	17042008	17042038	(66215403)	+	L2a	LINE/L2	3326	3356	(19)	1576012
35	2.8	0.0	0.0	chr17	17042418	17042454	(66214987)	+	(CGCC)n	Simple_repeat	1	37	(0)	1576015
367	25.1	22.0	3.0	chr17	17361719	17361919	(65895522)	C	MIR	SINE/MIR	(8)	254	5	1576519
17	17.5	2.6	0.0	chr17	17681398	17681436	(65576005)	+	(CCGC)n	Simple_repeat	1	40	(0)	1577150
21	31.9	1.5	0.0	chr17	17783970	17784035	(65473406)	+	(CT)n	Simple_repeat	1	67	(0)	1577348
210	32.3	0.0	2.9	chr17	17784059	17784160	(65473281)	C	UCON71_Crp	Unknown	(0)	277	179	1577349
184	26.4	1.9	0.0	chr17	18314439	18314491	(64942950)	C	L2a	LINE/L2	(675)	2744	2691	1578343
97	0.0	0.0	3.9	chr17	18634789	18634891	(64622550)	+	(GCCCCTCA)n	Simple_repeat	1	103	(0)	1578868
232	30.8	8.4	5.5	chr17	18855557	18855776	(64401665)	C	L2a	LINE/L2	(14)	3412	3186	1579267
283	24.5	11.7	9.0	chr17	18855953	18856118	(64401323)	C	MLT1K	LTR/ERVL-MaLR	(24)	571	401	1579268
253	25.6	10.6	7.0	chr17	18856137	18856308	(64401133)	C	MLT1K	LTR/ERVL-MaLR	(266)	329	151	1579268
610	25.8	2.7	4.2	chr17	19111295	19111484	(64145957)	C	AluJo	SINE/Alu	(124)	188	2	1579876
22	22.7	0.0	3.1	chr17	19507343	19507407	(63750034)	+	(GCCCCGC)n	Simple_repeat	1	65	(0)	1580742
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
13	17.4	0.0	2.9	chr17	19648298	19648331	(63609110)	+	GA-rich	Low_complexity	1	34	(0)	1581022
26	0.0	0.0	9.3	chr17	20843948	20843990	(62413451)	+	(GGGCG)n	Simple_repeat	1	43	(0)	1583222
35	34.1	2.8	4.7	chr17	21042336	21042586	(62214855)	+	G-rich	Low_complexity	1	258	(0)	1583514
15	30.1	5.8	2.8	chr17	21042490	21042592	(62214849)	+	GA-rich	Low_complexity	1	109	(0)	1583515
689	21.1	4.3	1.8	chr17	21338110	21338289	(61919152)	+	MIR	SINE/MIR	23	207	(23)	1584096
1684	21.7	5.6	1.7	chr17	21755791	21756408	(61501033)	+	L1ME1	LINE/L1	5487	6173	(6)	1584757
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
363	28.3	0.8	0.8	chr17	27353347	27353467	(55903974)	+	MER5A	DNA/hAT-Charlie	61	181	(8)	1586600
366	30.6	9.9	1.7	chr17	27794014	27794198	(55463243)	C	MIRc	SINE/MIR	(1)	267	69	1587416
61881	5.7	0.3	0.5	chr17	28231015	28238844	(55018597)	C	HERVE-int	LTR/ERV1	(1)	7812	1	1588311
256	28.4	8.5	0.0	chr17	28371168	28371300	(54886141)	+	MIR	SINE/MIR	84	235	(33)	1588526
13	12.2	8.3	0.0	chr17	28371488	28371523	(54885918)	+	G-rich	Low_complexity	1	39	(0)	1588527
22	15.1	2.3	0.0	chr17	28644934	28644977	(54612464)	+	(CCG)n	Simple_repeat	1	45	(0)	1589064
14	29.9	0.0	6.1	chr17	28645063	28645144	(54612297)	+	(CCCGG)n	Simple_repeat	1	82	(0)	1589065
26	19.0	2.3	5.6	chr17	28710974	28711060	(54546381)	+	G-rich	Low_complexity	1	89	(0)	1589185
12	19.7	2.3	4.4	chr17	28812233	28812276	(54445165)	+	(CGCTC)n	Simple_repeat	1	45	(0)	1589376
11	29.8	1.6	3.2	chr17	28812417	28812477	(54444964)	+	(CCCCAGC)n	Simple_repeat	1	62	(0)	1589377
860	29.3	8.0	6.6	chr17	28914872	28915251	(54342190)	C	L2c	LINE/L2	(0)	3387	3002	1589604
440	29.7	11.2	4.9	chr17	28915220	28915587	(54341854)	C	L2c	LINE/L2	(756)	2663	2270	1589604
15	20.4	0.0	0.0	chr17	28951010	28951038	(54306403)	+	G-rich	Low_complexity	1	29	(0)	1589655
2150	15.0	0.7	0.0	chr17	29874011	29874297	(53383144)	+	AluJb	SINE/Alu	1	289	(23)	1591528
2305	12.2	4.0	4.0	chr17	29874373	29874746	(53382695)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	1591529
18	23.6	2.2	6.5	chr17	29930050	29930066	(53327375)	+	G-rich	Low_complexity	1	87	(0)	1591635
17	26.2	4.4	0.0	chr17	29930067	29930134	(53327307)	+	(GGAGCGG)n	Simple_repeat	1	71	(0)	1591636
1115	23.3	12.2	6.5	chr17	31075123	31075553	(52181888)	+	LTR16A2	LTR/ERVL	32	490	(5)	1593951
11	24.0	4.5	0.0	chr17	31075558	31075601	(52181840)	+	A-rich	Low_complexity	1	46	(0)	1593952
15330	15.2	4.8	2.7	chr17	31129729	31131601	(52125840)	C	L1PA13	LINE/L1	(4831)	1954	1	1594063
15	22.3	0.0	6.8	chr17	31859327	31859385	(51398056)	+	G-rich	Low_complexity	1	59	(0)	1595487
21	24.8	0.0	1.7	chr17	31937083	31937140	(51320301)	+	(CCTTC)n	Simple_repeat	1	58	(0)	1595692
17	20.5	3.9	1.9	chr17	32007641	32007692	(51249749)	+	(CCG)n	Simple_repeat	1	54	(0)	1595844
56	0.0	0.0	0.0	chr17	32142452	32142501	(51114940)	+	(CCG)n	Simple_repeat	1	50	(0)	1596168
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
15	18.2	3.6	5.3	chr17	32877282	32877336	(50380105)	+	G-rich	Low_complexity	1	57	(0)	1597570
23	24.4	0.0	8.8	chr17	32928028	32928141	(50329300)	+	G-rich	Low_complexity	1	114	(0)	1597648
16	21.9	4.0	5.1	chr17	32928261	32928336	(50329105)	+	G-rich	Low_complexity	1	79	(0)	1597649
201	30.0	3.8	5.4	chr17	35120054	35120243	(48137198)	C	L2b	LINE/L2	(27)	3399	3217	1601737
652	20.2	3.5	5.1	chr17	35243779	35243955	(48013486)	C	PrimLTR79	LTR/ERV1	(1)	502	329	1601983
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
1613	12.8	0.8	0.0	chr17	35778232	35778480	(47478961)	+	L1MB7	LINE/L1	5925	6175	(9)	1602776
15606	16.7	3.8	1.6	chr17	36008695	36011432	(47246009)	+	HUERS-P2-int	LTR/ERV1	2	2801	(287)	1603260
17	20.9	0.0	2.2	chr17	36545250	36545295	(46712146)	+	G-rich	Low_complexity	1	46	(0)	1604133
29	14.9	0.0	7.7	chr17	36545398	36545475	(46711966)	+	(GGCG)n	Simple_repeat	1	78	(0)	1604134
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
12	20.7	4.3	2.1	chr17	36722506	36722551	(46534890)	+	G-rich	Low_complexity	1	48	(0)	1604499
14	22.4	1.8	5.2	chr17	36813992	36814048	(46443393)	+	(CCTCTC)n	Simple_repeat	1	58	(0)	1604704
13	15.7	2.6	5.0	chr17	36936596	36936634	(46320807)	+	(CCG)n	Simple_repeat	1	40	(0)	1604970
14	28.6	0.0	0.0	chr17	37489978	37490024	(45767417)	+	G-rich	Low_complexity	1	47	(0)	1605976
14	23.1	5.6	4.0	chr17	38257286	38257356	(45000085)	+	GA-rich	Low_complexity	1	75	(0)	1607469
22	22.1	4.5	3.2	chr17	38257413	38257501	(44999940)	+	G-rich	Low_complexity	1	93	(0)	1607470
12	16.8	0.0	0.0	chr17	38352020	38352046	(44905395)	+	(CTCC)n	Simple_repeat	1	27	(0)	1607689
12	19.2	0.0	10.3	chr17	38352297	38352354	(44905087)	+	(CCCTGGA)n	Simple_repeat	1	58	(0)	1607690
16	22.3	2.0	2.0	chr17	38352500	38352548	(44904893)	+	(CCG)n	Simple_repeat	1	50	(0)	1607691
26	0.0	0.0	0.0	chr17	38352780	38352804	(44904637)	+	(AGC)n	Simple_repeat	1	25	(0)	1607692
13	18.2	0.0	0.0	chr17	38352806	38352836	(44904605)	+	(CCGCCC)n	Simple_repeat	1	31	(0)	1607693
17	28.4	4.2	0.0	chr17	38730414	38730485	(44526956)	+	(CCCCCG)n	Simple_repeat	1	75	(0)	1608456
12	20.2	4.1	3.9	chr17	38730616	38730664	(44526777)	+	(CCCTCCT)n	Simple_repeat	1	51	(0)	1608457
24	2.6	2.2	6.5	chr17	38748222	38748266	(44509175)	+	(GGGA)n	Simple_repeat	1	46	(0)	1608484
25	11.7	1.6	6.2	chr17	38748347	38748409	(44509032)	+	G-rich	Low_complexity	1	64	(0)	1608485
628	4.1	0.0	0.0	chr17	38869291	38869363	(44388078)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608779
17	20.3	0.0	5.4	chr17	38869952	38870007	(44387434)	+	(CGTGCC)n	Simple_repeat	1	56	(0)	1608780
13	6.8	9.7	0.0	chr17	39668189	39668221	(43589220)	+	G-rich	Low_complexity	1	36	(0)	1610553
672	24.5	6.2	2.6	chr17	39699577	39699840	(43557601)	+	Charlie16a	DNA/hAT-Charlie	63	336	(6)	1610613
18	7.8	0.0	0.0	chr17	39699994	39700020	(43557421)	+	(AGG)n	Simple_repeat	1	27	(0)	1610614
10665	10.5	2.7	3.8	chr17	39822921	39824517	(43432924)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	1610835
11	18.1	2.4	4.8	chr17	40063411	40063451	(43193990)	+	(CCCGCCG)n	Simple_repeat	1	42	(0)	1611289
12	25.7	2.1	2.0	chr17	40063469	40063516	(43193925)	+	(CCCGAGC)n	Simple_repeat	1	49	(0)	1611290
15	7.8	0.0	3.5	chr17	40099088	40099116	(43158325)	+	(GGCGG)n	Simple_repeat	1	29	(0)	1611348
16	13.7	0.0	2.9	chr17	40121986	40122019	(43135422)	+	(GGC)n	Simple_repeat	1	34	(0)	1611391
20	26.4	5.1	1.9	chr17	40122194	40122291	(43135150)	+	G-rich	Low_complexity	1	103	(0)	1611392
15	12.6	9.3	0.0	chr17	40122347	40122389	(43135052)	+	(GAGGCG)n	Simple_repeat	1	47	(0)	1611393
13	9.1	8.1	2.5	chr17	40341938	40341977	(42915464)	+	(TTCCTCC)n	Simple_repeat	1	42	(0)	1611855
19	30.7	2.2	2.1	chr17	40342076	40342166	(42915275)	+	G-rich	Low_complexity	1	93	(0)	1611856
17	0.0	0.0	0.0	chr17	40443293	40443313	(42814128)	+	(GCG)n	Simple_repeat	1	21	(0)	1612057
18	21.5	0.0	5.1	chr17	40443327	40443385	(42814056)	+	(CCCCCT)n	Simple_repeat	1	59	(0)	1612058
12	15.8	2.6	5.0	chr17	40443451	40443489	(42813952)	+	(GCCCCTC)n	Simple_repeat	1	40	(0)	1612059
12	22.1	2.7	0.0	chr17	40557940	40557976	(42699465)	+	G-rich	Low_complexity	1	38	(0)	1612303
184	30.4	2.8	4.2	chr17	41665811	41665882	(41591559)	+	L2c	LINE/L2	3316	3386	(1)	1613989
12	12.0	3.3	3.2	chr17	41688405	41688434	(41569007)	+	(GTAG)n	Simple_repeat	1	31	(0)	1614054
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
214	24.1	17.1	2.2	chr17	41738204	41738292	(41519149)	C	MIRc	SINE/MIR	(49)	219	115	1614171
13	18.9	2.8	0.0	chr17	41738664	41738699	(41518742)	+	(GCCCCT)n	Simple_repeat	1	37	(0)	1614172
187	25.0	0.0	0.0	chr17	41801851	41801898	(41455543)	C	MIR3	SINE/MIR	(60)	148	101	1614330
13	0.0	0.0	8.0	chr17	42050479	42050503	(41206938)	+	(CCGC)n	Simple_repeat	1	25	(0)	1614843
21	23.8	3.9	4.7	chr17	42423106	42423207	(40834234)	+	(GGAGCG)n	Simple_repeat	1	106	(0)	1615601
19	9.2	6.0	3.8	chr17	42761382	42761431	(40496010)	+	G-rich	Low_complexity	1	53	(0)	1616315
2171	8.0	0.0	3.5	chr17	42824490	42824803	(40432638)	+	AluSx	SINE/Alu	4	306	(6)	1616424
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
318	20.1	9.1	1.5	chr17	43272629	43272830	(39984611)	+	HERVIP10FH-int	LTR/ERV1	820	1038	(4064)	1617463
5449	9.3	8.3	2.6	chr17	43359217	43359892	(39897549)	C	PRIMA41-int	LTR/ERV1	(7025)	731	3	1617616
371	30.8	10.1	2.4	chr17	43368998	43369416	(39888025)	C	L2	LINE/L2	(422)	2997	2543	1617637
325	26.0	12.3	1.0	chr17	43379032	43379132	(39878309)	+	MIRb	SINE/MIR	59	176	(92)	1617663
381	30.2	6.5	11.8	chr17	43388857	43389213	(39868228)	+	L2c	LINE/L2	3050	3386	(1)	1617686
554	13.2	0.0	0.0	chr17	43441812	43441887	(39815554)	+	AluJr	SINE/Alu	10	85	(227)	1617837
1032	20.2	21.2	3.5	chr17	43441894	43442392	(39815049)	+	MER51E	LTR/ERV1	1	618	(16)	1617838
17	26.1	2.8	2.7	chr17	43545482	43545553	(39711888)	+	G-rich	Low_complexity	1	74	(0)	1618070
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
24	23.2	7.1	0.9	chr17	43833195	43833205	(39424236)	+	(GCG)n	Simple_repeat	1	102	(0)	1618679
20	27.4	1.2	3.5	chr17	43833206	43833289	(39424152)	+	G-rich	Low_complexity	1	85	(0)	1618680
319	25.5	0.0	12.2	chr17	43833482	43833588	(39423853)	C	L2b	LINE/L2	(4)	3383	3284	1618681
1760	11.8	10.5	2.1	chr17	43908453	43908731	(39348710)	+	AluJb	SINE/Alu	1	305	(7)	1618831
12	19.6	2.9	0.0	chr17	44123383	44123417	(39134024)	+	(GGAGCGC)n	Simple_repeat	1	36	(0)	1619259
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
13	18.3	2.6	2.5	chr17	44199081	44199119	(39058322)	+	(GCCGG)n	Simple_repeat	1	40	(0)	1619428
14	14.9	5.4	0.0	chr17	44199251	44199287	(39058154)	+	(GCCCC)n	Simple_repeat	1	39	(0)	1619429
22	26.2	1.5	0.0	chr17	44199420	44199431	(39058010)	+	(CCCCGC)n	Simple_repeat	1	32	(37)	1619430
16	21.3	0.0	2.2	chr17	44199432	44199476	(39057965)	+	(CCCCGCC)n	Simple_repeat	1	45	(0)	1619431
22	26.2	1.5	0.0	chr17	44199477	44199487	(39057954)	+	(CCCCGC)n	Simple_repeat	33	69	(0)	1619430
16	8.5	0.0	0.0	chr17	44199548	44199572	(39057869)	+	(CGG)n	Simple_repeat	1	25	(0)	1619432
22	25.1	3.0	0.0	chr17	44199958	44200024	(39057417)	+	(CCT)n	Simple_repeat	1	69	(0)	1619433
21	15.4	3.1	6.0	chr17	44219706	44219770	(39037671)	+	(CCG)n	Simple_repeat	1	67	(0)	1619464
20	20.1	0.0	5.2	chr17	44219770	44219827	(39037614)	+	GA-rich	Low_complexity	1	58	(0)	1619465
14	21.1	0.0	6.1	chr17	44219884	44219932	(39037509)	+	(CGCC)n	Simple_repeat	1	49	(0)	1619466
17	10.8	0.0	0.0	chr17	44308345	44308374	(38949067)	+	(CGAGG)n	Simple_repeat	1	30	(0)	1619670
13	18.9	0.0	0.0	chr17	44363653	44363682	(38893759)	+	(AGC)n	Simple_repeat	1	30	(0)	1619784
24	19.9	4.2	5.0	chr17	44363747	44363841	(38893600)	+	(GCTCCC)n	Simple_repeat	1	99	(0)	1619785
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
17	22.1	0.0	2.0	chr17	44557636	44557684	(38699757)	+	G-rich	Low_complexity	1	49	(0)	1620209
15	18.9	6.8	3.2	chr17	44557691	44557715	(38699726)	+	(GCC)n	Simple_repeat	1	44	(19)	1620210
18	4.2	0.0	0.0	chr17	44557716	44557740	(38699701)	+	(CTG)n	Simple_repeat	1	25	(0)	1620211
15	18.9	6.8	3.2	chr17	44557741	44557749	(38699692)	+	(GCC)n	Simple_repeat	45	63	(0)	1620210
268	31.9	6.0	1.1	chr17	44843173	44843267	(38414174)	C	MIRb	SINE/MIR	(71)	197	98	1620846
203	0.0	2.1	0.5	chr17	45006648	45006841	(38250600)	+	(CCCTCCAACC)n	Simple_repeat	1	198	(0)	1621158
215	17.5	15.6	2.8	chr17	45007420	45007512	(38249929)	C	MIR1_Amn	SINE/MIR	(104)	126	16	1621159
2318	11.0	0.7	0.0	chr17	45007513	45007812	(38249629)	C	AluSx	SINE/Alu	(10)	302	1	1621160
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
12	5.5	0.0	0.0	chr17	45248052	45248070	(38009371)	+	(GGA)n	Simple_repeat	1	19	(0)	1621666
14	20.2	0.0	0.0	chr17	45783597	45783630	(37473811)	+	(ATGA)n	Simple_repeat	1	34	(0)	1622786
48	22.2	1.6	6.5	chr17	45784098	45784280	(37473161)	+	G-rich	Low_complexity	1	186	(0)	1622787
28	18.2	2.9	1.4	chr17	45784342	45784411	(37473030)	+	G-rich	Low_complexity	1	72	(0)	1622787
315	31.1	0.8	9.2	chr17	46113904	46114034	(37143407)	C	MIR3	SINE/MIR	(15)	193	74	1623397
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
425	24.1	13.2	7.1	chr17	46716763	46717017	(36540424)	C	L1ME4a	LINE/L1	(140)	5984	5712	1624607
2042	15.5	8.3	1.2	chr17	46717019	46717429	(36540012)	+	L1MA4	LINE/L1	5669	6111	(189)	1624608
477	30.7	4.1	0.0	chr17	46789501	46789663	(36467778)	+	L1MC5a	LINE/L1	2087	2256	(521)	1624719
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
647	29.2	10.2	0.3	chr17	47324759	47325030	(35932411)	+	L2a	LINE/L2	1777	2083	(1336)	1625798
1454	17.4	4.4	4.4	chr17	47325031	47325324	(35932117)	C	AluJr	SINE/Alu	(18)	294	1	1625799
11113	12.1	3.4	2.2	chr17	47385071	47387098	(35870343)	C	L1PA7	LINE/L1	(4450)	2033	5	1625885
2728	15.0	2.2	0.0	chr17	47387106	47387585	(35869856)	C	L1M3f	LINE/L1	(3288)	3441	2951	1625888
16	16.0	3.7	5.4	chr17	47530987	47531040	(35726401)	+	(CGCCCT)n	Simple_repeat	1	56	(0)	1626213
12	28.6	4.2	2.7	chr17	47531097	47531167	(35726274)	+	(CCT)n	Simple_repeat	1	74	(0)	1626214
16	0.0	0.0	0.0	chr17	47693650	47693666	(35563775)	+	(A)n	Simple_repeat	1	17	(0)	1626573
29	24.0	4.0	1.9	chr17	47693965	47694101	(35563340)	+	GA-rich	Low_complexity	1	139	(0)	1626574
15	21.9	0.0	2.3	chr17	47694205	47694248	(35563193)	+	(GGCTGG)n	Simple_repeat	1	44	(0)	1626575
459	14.4	9.0	1.1	chr17	47832704	47832799	(35424642)	C	FLAM_C	SINE/Alu	(1)	132	33	1626805
436	19.1	1.1	0.0	chr17	47833010	47833098	(35424343)	+	MER5A1	DNA/hAT-Charlie	24	113	(53)	1626806
385	27.9	10.0	4.4	chr17	47833128	47833352	(35424089)	+	L2c	LINE/L2	3041	3279	(108)	1626807
15	14.9	2.6	2.5	chr17	48101118	48101156	(35156285)	+	G-rich	Low_complexity	1	40	(0)	1627294
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
2511	6.7	0.3	0.0	chr17	48111366	48111663	(35145778)	+	AluSp	SINE/Alu	1	299	(14)	1627317
16	13.2	0.0	0.0	chr17	48555663	48555687	(34701754)	+	(C)n	Simple_repeat	1	25	(0)	1628091
26	20.3	0.0	0.0	chr17	48555970	48556020	(34701421)	+	(CA)n	Simple_repeat	1	51	(0)	1628092
16	20.9	1.1	10.1	chr17	48625316	48625427	(34632014)	+	(CCGGCCC)n	Simple_repeat	1	101	(0)	1628155
17	15.4	0.0	2.6	chr17	48626805	48626842	(34630599)	+	G-rich	Low_complexity	1	38	(0)	1628158
101	8.1	2.0	0.7	chr17	48647022	48647169	(34610272)	+	(GA)n	Simple_repeat	1	151	(0)	1628176
13	28.3	1.8	1.7	chr17	48647332	48647388	(34610053)	+	G-rich	Low_complexity	1	58	(0)	1628177
14	16.1	2.1	6.2	chr17	48817324	48817370	(34440071)	+	(CAGCC)n	Simple_repeat	1	48	(0)	1628551
365	28.5	11.3	0.6	chr17	48817498	48817663	(34439778)	+	MIRc	SINE/MIR	2	187	(81)	1628552
2198	9.7	1.0	2.3	chr17	48932465	48932764	(34324677)	+	AluSp	SINE/Alu	1	296	(17)	1628839
2420	10.6	0.0	0.0	chr17	48973502	48973812	(34283629)	+	AluSx3	SINE/Alu	1	311	(0)	1628952
385	29.9	5.1	6.2	chr17	48974097	48974274	(34283167)	+	MIRc	SINE/MIR	2	177	(91)	1628953
2019	14.5	1.6	0.0	chr17	49259271	49259573	(33997868)	C	AluSx	SINE/Alu	(4)	308	1	1629557
29	10.3	0.0	0.0	chr17	49259697	49259738	(33997703)	+	(T)n	Simple_repeat	1	42	(0)	1629558
215	30.4	2.5	1.2	chr17	49260017	49260096	(33997345)	+	MIRc	SINE/MIR	122	202	(66)	1629559
13	12.0	3.7	0.0	chr17	49361350	49361376	(33896065)	+	GA-rich	Low_complexity	1	28	(0)	1629783
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
12	31.4	4.5	0.0	chr17	49763533	49763599	(33493842)	+	(CCCTCAC)n	Simple_repeat	1	70	(0)	1630519
241	29.6	14.8	4.2	chr17	49771499	49771618	(33485823)	+	L2a	LINE/L2	3291	3425	(1)	1630536
321	29.4	8.8	9.2	chr17	50107609	50107814	(33149627)	C	L2a	LINE/L2	(65)	3361	3157	1631173
233	19.1	6.8	0.0	chr17	50107995	50108062	(33149379)	C	MLT1J	LTR/ERVL-MaLR	(363)	149	77	1631174
12	16.0	0.0	3.3	chr17	50150989	50151018	(33106423)	+	(CGCCG)n	Simple_repeat	1	30	(0)	1631240
18	4.0	0.0	0.0	chr17	50151017	50151042	(33106399)	+	(CCTC)n	Simple_repeat	1	26	(0)	1631241
16	22.0	2.0	2.0	chr17	50151187	50151236	(33106205)	+	(CCCTC)n	Simple_repeat	1	51	(0)	1631242
368	27.8	1.8	0.0	chr17	50151465	50151572	(33105869)	+	MER5A	DNA/hAT-Charlie	34	143	(46)	1631243
11	13.3	5.7	2.7	chr17	50201182	50201216	(33056225)	+	(CTCCCG)n	Simple_repeat	1	37	(0)	1631308
16	20.9	4.1	5.3	chr17	50273238	50273310	(32984131)	+	(CCGCGC)n	Simple_repeat	1	76	(0)	1631442
26	6.3	0.0	0.0	chr17	50575888	50575921	(32681520)	+	(CAC)n	Simple_repeat	1	34	(0)	1632060
424	35.9	0.6	1.2	chr17	50576367	50576535	(32680906)	+	MIRb	SINE/MIR	5	172	(96)	1632061
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
15	28.4	1.6	1.6	chr17	50865613	50865673	(32391768)	+	(GCCCC)n	Simple_repeat	1	62	(0)	1632610
14	17.1	1.6	9.4	chr17	50866466	50866528	(32390913)	+	(CCCCGG)n	Simple_repeat	1	64	(0)	1632611
822	21.6	2.2	0.6	chr17	51613012	51613188	(31644253)	+	MLT2B3	LTR/ERVL	1	180	(374)	1634096
267	19.1	0.0	0.0	chr17	51613189	51613230	(31644211)	C	Ricksha_c	DNA/MULE-MuDR	(1538)	510	469	1634097
128	30.2	2.8	1.1	chr17	51613231	51613667	(31643774)	+	(TC)n	Simple_repeat	1	449	(0)	1634098
411	26.8	12.3	1.2	chr17	55011247	55011412	(28246029)	C	L1ME3D	LINE/L1	(0)	6242	6056	1638923
22	10.5	0.0	0.0	chr17	55011494	55011524	(28245917)	+	(T)n	Simple_repeat	1	31	(0)	1638924
2452	6.0	3.4	0.3	chr17	55011525	55011840	(28245601)	C	LTR17	LTR/ERV1	(454)	326	1	1638925
831	16.9	0.0	0.0	chr17	55431723	55431846	(27825595)	+	AluJo	SINE/Alu	1	124	(188)	1639618
113	13.4	0.9	4.0	chr17	55431852	55432076	(27825365)	+	G-rich	Low_complexity	1	227	(0)	1639619
17	18.5	0.0	0.0	chr17	56596762	56596792	(26660649)	+	(C)n	Simple_repeat	1	31	(0)	1641541
14	23.2	3.9	1.9	chr17	56597645	56597696	(26659745)	+	(CGCC)n	Simple_repeat	1	54	(0)	1641542
589	37.0	12.4	3.8	chr17	56683830	56684433	(26573008)	C	L3	LINE/CR1	(2963)	1136	474	1641736
14	31.4	2.1	4.2	chr17	57085116	57085208	(26172233)	+	G-rich	Low_complexity	1	95	(0)	1642628
23	9.4	0.0	0.0	chr17	57988189	57988223	(25269218)	+	(GCG)n	Simple_repeat	1	35	(0)	1644235
21	16.2	2.0	2.0	chr17	58083200	58083251	(25174190)	+	(CCCTCC)n	Simple_repeat	1	52	(0)	1644417
15	19.1	5.3	3.3	chr17	58084143	58084199	(25173242)	+	(GGCC)n	Simple_repeat	1	60	(0)	1644418
39	9.5	0.0	0.0	chr17	58756097	58756154	(24501287)	+	(GAACCC)n	Simple_repeat	1	58	(0)	1645698
25	27.6	0.0	0.0	chr17	58756225	58756298	(24501143)	+	GA-rich	Low_complexity	1	74	(0)	1645699
17	29.8	2.5	1.2	chr17	58756310	58756388	(24501053)	+	(GCCGCC)n	Simple_repeat	1	81	(0)	1645700
208	18.8	4.1	0.0	chr17	59565188	59565236	(23692205)	+	MIRc	SINE/MIR	61	108	(100)	1647535
335	32.5	5.6	6.6	chr17	59619923	59620103	(23637338)	+	L1MDb	LINE/L1	582	760	(5649)	1647644
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
15	28.3	0.0	1.9	chr17	60600533	60600585	(22656856)	+	(CGC)n	Simple_repeat	1	53	(0)	1649630
12	14.7	3.3	0.0	chr17	61160991	61161020	(22096421)	+	(CCTTCC)n	Simple_repeat	1	31	(0)	1650596
11	21.5	6.0	1.9	chr17	61412641	61412690	(21844751)	+	(AGGCAC)n	Simple_repeat	1	53	(0)	1651017
21	18.0	8.7	0.0	chr17	62478994	62479062	(20778379)	+	(CCGGCGC)n	Simple_repeat	1	75	(0)	1653081
28	22.5	1.5	8.2	chr17	62627530	62627662	(20629779)	+	(CCCCCT)n	Simple_repeat	1	135	(0)	1653391
13	16.0	2.7	2.6	chr17	62704029	62704065	(20553376)	+	G-rich	Low_complexity	1	38	(0)	1653549
19	24.2	1.2	6.0	chr17	62704155	62704236	(20553205)	+	(CGGAGG)n	Simple_repeat	1	83	(0)	1653550
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
377	12.5	3.0	0.0	chr17	64425269	64425332	(18832109)	+	MER41-int	LTR/ERV1	3724	3789	(3748)	1656554
699	13.6	0.0	0.2	chr17	64425336	64425446	(18831995)	C	MER41B	LTR/ERV1	(412)	109	1	1656562
1545	15.7	1.6	1.8	chr17	64425451	64425808	(18831633)	C	MER41-int	LTR/ERV1	(6)	5940	5503	1656562
25	22.3	1.6	0.0	chr17	64662112	64662174	(18595267)	+	(GCC)n	Simple_repeat	1	64	(0)	1657018
30	7.0	2.9	7.0	chr17	64662354	64662422	(18595019)	+	G-rich	Low_complexity	1	71	(0)	1657019
20	21.3	1.4	5.5	chr17	65056239	65056311	(18201130)	+	(CCCCGC)n	Simple_repeat	1	70	(0)	1657849
17	30.7	0.0	1.6	chr17	65056597	65056658	(18200783)	+	(GCC)n	Simple_repeat	1	62	(0)	1657850
13	20.4	5.6	3.5	chr17	65056651	65056704	(18200737)	+	(CGG)n	Simple_repeat	1	57	(0)	1657851
21	11.9	12.5	0.0	chr17	65056717	65056809	(18200632)	+	(GCAGG)n	Simple_repeat	1	104	(0)	1657852
908	10.6	9.3	0.2	chr17	65487499	65487699	(17769742)	C	MSTB	LTR/ERVL-MaLR	(4)	461	225	1658777
560	26.1	0.1	0.1	chr17	65487702	65489026	(17768415)	+	GA-rich	Low_complexity	1	1325	(0)	1658778
1316	14.8	2.6	0.5	chr17	65489027	65489250	(17768191)	C	MSTB	LTR/ERVL-MaLR	(197)	229	1	1658777
15	16.9	0.0	0.0	chr17	65559093	65559125	(17698316)	+	(CCCTC)n	Simple_repeat	1	33	(0)	1658887
13	21.7	2.6	0.0	chr17	65560223	65560260	(17697181)	+	G-rich	Low_complexity	1	39	(0)	1658888
23	23.1	3.9	1.2	chr17	65560866	65560943	(17696498)	+	(GCCCCG)n	Simple_repeat	1	81	(0)	1658889
2414	11.1	3.6	0.0	chr17	65617166	65617516	(17639925)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1659009
24	8.0	3.2	7.8	chr17	66964833	66964894	(16292547)	+	G-rich	Low_complexity	1	64	(0)	1661142
2413	5.3	0.0	0.0	chr17	66990698	66990979	(16266462)	C	AluY	SINE/Alu	(29)	282	1	1661196
430	29.6	3.1	9.1	chr17	66990980	66991066	(16266375)	+	MIRb	SINE/MIR	129	214	(54)	1661194
23	14.6	4.7	3.0	chr17	67245234	67245297	(16012144)	+	(CCTCCCG)n	Simple_repeat	1	67	(0)	1661589
1503	21.9	18.1	3.8	chr17	67649750	67650220	(15607221)	C	MER21C	LTR/ERVL	(261)	677	125	1662471
264	29.9	1.3	0.0	chr17	67650241	67650317	(15607124)	+	MIRb	SINE/MIR	184	261	(7)	1662473
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
21	24.9	1.5	1.4	chr17	68196514	68196581	(15060860)	+	G-rich	Low_complexity	1	69	(0)	1663727
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
29	5.8	0.0	0.0	chr17	68205729	68205764	(15051677)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1663742
12	19.6	0.0	0.0	chr17	68600958	68600986	(14656455)	+	(CCCG)n	Simple_repeat	1	29	(0)	1664474
19	29.0	5.4	0.0	chr17	68600998	68601089	(14656352)	+	(GGCCGCC)n	Simple_repeat	1	97	(0)	1664475
84	26.8	12.1	0.9	chr17	69765274	69765965	(13491476)	+	(TCTCTC)n	Simple_repeat	1	776	(0)	1666282
972	19.3	2.1	8.6	chr17	69765967	69766208	(13491233)	C	MLT1H1	LTR/ERVL-MaLR	(297)	294	65	1666281
4993	11.8	3.1	0.7	chr17	70577209	70577969	(12679472)	+	LTR17	LTR/ERV1	1	780	(0)	1667507
10638	11.3	4.4	0.3	chr17	70860482	70862032	(12395409)	+	THE1D-int	LTR/ERVL-MaLR	15	1631	(0)	1667916
1777	15.6	5.0	2.7	chr17	70862035	70862404	(12395037)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	1667916
34	16.1	2.9	0.0	chr17	71727507	71727576	(11529865)	+	(TTCC)n	Simple_repeat	1	72	(0)	1669219
2647	17.7	2.1	0.8	chr17	71727594	71728111	(11529330)	C	L1MB3	LINE/L1	(7)	6176	5652	1669220
24	14.4	0.0	0.0	chr17	72120667	72120705	(11136736)	+	(AC)n	Simple_repeat	1	39	(0)	1669832
12	28.7	0.0	2.1	chr17	72120784	72120831	(11136610)	+	(CCCG)n	Simple_repeat	1	48	(0)	1669833
19	33.0	0.0	2.3	chr17	72120832	72120866	(11136575)	+	(TCCCC)n	Simple_repeat	4	86	(0)	1669834
17	0.0	0.0	0.0	chr17	72219717	72219735	(11037706)	+	(A)n	Simple_repeat	1	19	(0)	1670007
246	29.1	7.6	16.4	chr17	72475666	72475884	(10781557)	C	MamTip2	DNA/hAT-Tip100	(1)	304	128	1670441
1075	19.0	3.6	1.4	chr17	72475885	72476098	(10781343)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1670442
5726	10.3	0.3	0.6	chr17	72637972	72638754	(10618687)	+	LTR17	LTR/ERV1	1	780	(0)	1670732
289	32.9	10.1	6.9	chr17	73272837	73273009	(9984432)	+	MamSINE1	SINE/tRNA-RTE	43	221	(69)	1671966
2454	7.4	0.0	1.0	chr17	73273230	73273538	(9983903)	C	AluY	SINE/Alu	(5)	306	1	1671967
13	22.7	4.3	0.0	chr17	73743160	73743205	(9514236)	+	(GCTCCT)n	Simple_repeat	1	48	(0)	1672876
112	26.8	4.2	2.5	chr17	73757787	73758212	(9499229)	+	(CCTCT)n	Simple_repeat	1	444	(0)	1672898
13	8.3	9.5	4.3	chr17	74432425	74432466	(8824975)	+	(CGCC)n	Simple_repeat	1	46	(0)	1674156
18	31.8	1.7	5.0	chr17	75047210	75047279	(8210162)	+	(CGG)n	Simple_repeat	1	116	(0)	1675237
13	14.3	2.3	6.7	chr17	75047280	75047323	(8210118)	+	(GGCGG)n	Simple_repeat	1	45	(0)	1675238
2221	10.6	0.3	0.7	chr17	75344393	75344693	(7912748)	C	AluSq2	SINE/Alu	(13)	300	1	1675905
2377	7.3	0.3	1.6	chr17	75345029	75345343	(7912098)	C	AluY	SINE/Alu	(0)	311	1	1675906
124	0.0	0.8	1.7	chr17	76121216	76121333	(7136108)	+	(CA)n	Simple_repeat	1	119	(0)	1677425
20	3.7	0.0	0.0	chr17	76121563	76121598	(7135843)	+	(CCGGG)n	Simple_repeat	1	36	(0)	1677426
13	15.2	2.5	4.9	chr17	76121990	76122029	(7135412)	+	G-rich	Low_complexity	1	41	(0)	1677427
835	24.7	14.0	4.0	chr17	76672244	76672743	(6584698)	+	L1MC5a	LINE/L1	56	605	(2172)	1678525
16	15.5	1.7	8.3	chr17	76925214	76925272	(6332169)	+	(CTGCC)n	Simple_repeat	1	60	(0)	1679042
242	29.9	1.3	0.0	chr17	76969746	76969822	(6287619)	C	Tigger4	DNA/TcMar-Tigger	(620)	2111	2034	1679133
12	23.2	0.0	4.5	chr17	77140636	77140679	(6116762)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1679537
14	16.1	0.0	0.0	chr17	77281154	77281182	(5976259)	+	(CCTGG)n	Simple_repeat	1	29	(0)	1679797
17	22.7	0.0	0.0	chr17	77281362	77281397	(5976044)	+	G-rich	Low_complexity	1	36	(0)	1679798
344	35.3	4.3	1.3	chr17	77356357	77356580	(5900861)	+	MIR	SINE/MIR	4	234	(28)	1679929
13	43.0	1.1	0.0	chr17	77356599	77356688	(5900753)	+	(CTC)n	Simple_repeat	1	91	(0)	1679930
12	18.1	0.0	3.0	chr17	77374837	77374869	(5882572)	+	GA-rich	Low_complexity	1	33	(0)	1679960
14	18.9	2.8	0.0	chr17	77528733	77528768	(5728673)	+	G-rich	Low_complexity	1	37	(0)	1680186
17	10.8	0.0	0.0	chr17	77529116	77529145	(5728296)	+	(GCTGG)n	Simple_repeat	1	30	(0)	1680187
270	31.0	4.4	0.0	chr17	78074583	78074669	(5182772)	+	L2a	LINE/L2	3317	3407	(19)	1681156
249	31.1	9.6	2.4	chr17	78074692	78074856	(5182585)	C	L2a	LINE/L2	(236)	3190	3013	1681157
20	16.7	0.0	7.9	chr17	78128297	78128359	(5129082)	+	(CCTCC)n	Simple_repeat	1	63	(0)	1681240
16	9.8	0.0	0.0	chr17	78128795	78128816	(5128625)	+	(G)n	Simple_repeat	1	22	(0)	1681241
12	24.5	2.2	2.2	chr17	78128834	78128878	(5128563)	+	(CCCGC)n	Simple_repeat	1	46	(0)	1681242
207	35.4	1.2	0.0	chr17	78128964	78129045	(5128396)	+	MIRc	SINE/MIR	101	183	(85)	1681243
14	14.2	3.2	0.0	chr17	78353182	78353212	(4904229)	+	(CGCC)n	Simple_repeat	1	32	(0)	1681717
12	22.7	6.4	0.0	chr17	78359989	78360035	(4897406)	+	(GGCG)n	Simple_repeat	1	50	(0)	1681726
14	26.5	0.0	3.8	chr17	78360287	78360339	(4897102)	+	(GCG)n	Simple_repeat	1	53	(0)	1681727
17	19.2	3.4	4.9	chr17	78925303	78925363	(4332078)	+	(GGC)n	Simple_repeat	1	60	(0)	1682695
12	24.5	2.6	7.5	chr17	78925564	78925641	(4331800)	+	(CCCGGAC)n	Simple_repeat	1	80	(0)	1682696
194	28.4	8.6	0.0	chr17	78980451	78980524	(4276917)	C	MIRb	SINE/MIR	(170)	98	18	1682796
12	14.8	4.9	4.7	chr17	79097236	79097276	(4160165)	+	(CCT)n	Simple_repeat	1	43	(0)	1682989
416	34.9	12.5	1.6	chr17	79270026	79270599	(3986842)	+	L2	LINE/L2	2083	2728	(691)	1683214
13	16.3	5.0	2.4	chr17	79589957	79590001	(3667440)	+	GA-rich	Low_complexity	1	46	(0)	1683631
1976	9.7	0.0	0.4	chr17	79637425	79637693	(3619748)	+	AluSq2	SINE/Alu	14	281	(32)	1683679
86	13.1	1.4	0.7	chr17	79637699	79637846	(3619595)	+	G-rich	Low_complexity	1	150	(0)	1683680
12513	16.1	2.9	2.2	chr17	79637847	79638561	(3618880)	+	L1MA9	LINE/L1	4160	4873	(2686)	1683678
2039	9.4	0.0	0.0	chr17	79745971	79746226	(3511215)	+	AluSq2	SINE/Alu	58	313	(0)	1683863
23	8.0	2.4	0.0	chr17	79746227	79746264	(3511177)	+	(AGAAA)n	Simple_repeat	3	41	(0)	1683864
22	21.5	0.0	0.0	chr17	79746414	79746462	(3510979)	+	(CCT)n	Simple_repeat	1	49	(0)	1683865
35	24.4	2.4	3.1	chr17	79777908	79778031	(3479410)	+	(CCCGCC)n	Simple_repeat	1	127	(0)	1683937
21	14.6	0.0	0.0	chr17	79796789	79796826	(3460615)	+	(GCC)n	Simple_repeat	1	38	(0)	1683951
18	18.8	2.0	2.0	chr17	79810553	79810602	(3446839)	+	(CCGCTC)n	Simple_repeat	1	51	(0)	1683966
44	7.6	0.0	0.0	chr17	79810659	79810714	(3446727)	+	(TG)n	Simple_repeat	1	56	(0)	1683967
18	19.5	0.0	0.0	chr17	79810795	79810829	(3446612)	+	(C)n	Simple_repeat	1	35	(0)	1683968
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
308	33.7	16.6	0.0	chr17	79869069	79869234	(3388207)	C	MIRb	SINE/MIR	(27)	241	43	1684073
209	30.6	4.0	0.0	chr17	80260067	80260138	(2997303)	C	MIR1_Amn	SINE/MIR	(86)	144	70	1684773
97	23.3	4.0	2.6	chr17	80260501	80260828	(2996613)	+	(CGCCGG)n	Simple_repeat	1	341	(0)	1684774
12	20.2	2.9	0.0	chr17	81034527	81034560	(2222881)	+	(GGCC)n	Simple_repeat	1	35	(0)	1685811
2397	6.7	0.0	1.7	chr17	81243966	81244264	(2013177)	+	AluYm1	SINE/Alu	1	294	(17)	1686028
302	33.2	9.2	1.4	chr17	81372948	81373175	(1884266)	+	L2a	LINE/L2	2837	3083	(343)	1686199
19	17.2	0.0	0.0	chr17	81397396	81397428	(1860013)	+	A-rich	Low_complexity	1	33	(0)	1686229
377	23.1	30.5	2.6	chr17	81491897	81492090	(1765351)	+	MLT1F1	LTR/ERVL-MaLR	310	569	(0)	1686301
5463	9.2	1.1	1.5	chr17	82040894	82041383	(1216058)	C	HERVK11-int	LTR/ERVK	(1026)	6927	6431	1687067
639	11.1	0.9	0.9	chr17	82041397	82041505	(1215936)	C	HERVK11-int	LTR/ERVK	(7840)	113	5	1687069
1962	6.3	0.0	0.4	chr17	82041512	82041783	(1215658)	C	MER11A	LTR/ERVK	(0)	1266	996	1687069
2033	12.0	0.0	1.8	chr17	82041784	82042067	(1215374)	+	AluSq2	SINE/Alu	34	312	(1)	1687070
14	0.0	13.8	0.0	chr17	82103824	82103852	(1153589)	+	(GGGGCA)n	Simple_repeat	1	33	(0)	1687141
152	20.1	1.9	3.6	chr17	82293107	82293531	(963910)	+	G-rich	Low_complexity	1	417	(0)	1687437
2453	8.1	0.0	0.0	chr17	82309430	82309726	(947715)	C	AluSc8	SINE/Alu	(14)	297	1	1687465
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
416	23.8	1.0	0.0	chr17	82843157	82843257	(414184)	C	L1ME2z	LINE/L1	(4)	6440	6339	1688324
1072	31.0	6.7	6.4	chr17	82886596	82886635	(370806)	C	L1ME1	LINE/L1	(14)	6345	6325	1688367
73	0.0	0.0	0.0	chr17	82886636	82886700	(370741)	+	(CTCCC)n	Simple_repeat	1	65	(0)	1688368
2158	7.5	0.4	0.0	chr17	82886702	82886967	(370474)	C	AluSz	SINE/Alu	(44)	268	2	1688369
19	21.2	0.0	2.0	chr17	83051904	83051954	(205487)	+	(GGCGG)n	Simple_repeat	1	51	(0)	1688528
1283	26.7	6.5	1.0	chr17	83119716	83119925	(137516)	+	L1MB8	LINE/L1	5778	5993	(185)	1688581
607	22.6	6.9	3.5	chr17	83120138	83120334	(137107)	+	L1MB7	LINE/L1	5981	6184	(0)	1688583
12	27.7	0.0	0.0	chr17	83199152	83199190	(58251)	+	(CCT)n	Simple_repeat	1	39	(0)	1688661
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
6748	8.4	17.1	0.6	chr18	3003428	3004482	(77368803)	+	MER11A	LTR/ERVK	1	1266	(0)	1693582
603	27.2	4.7	3.2	chr18	3004598	3004848	(77368437)	C	MamRep137	DNA/TcMar-Tigger	(55)	455	201	1693583
2123	16.5	4.5	0.7	chr18	6677159	6677566	(73695719)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	9	1698895
442	24.3	7.8	5.7	chr18	6677578	6677878	(73695407)	C	L1ME4a	LINE/L1	(1)	6123	5816	1698896
14	28.8	0.0	0.0	chr18	9136873	9136919	(71236366)	+	(GGCGAC)n	Simple_repeat	1	47	(0)	1702521
14	21.9	2.0	3.9	chr18	9137107	9137157	(71236128)	+	(CGCCC)n	Simple_repeat	1	52	(0)	1702522
12	21.0	2.5	2.4	chr18	9137210	9137249	(71236036)	+	(CCG)n	Simple_repeat	1	41	(0)	1702523
16	11.4	5.0	2.4	chr18	9137283	9137322	(71235963)	+	G-rich	Low_complexity	1	42	(0)	1702524
18	23.6	1.6	3.1	chr18	9334698	9334760	(71038525)	+	G-rich	Low_complexity	1	64	(0)	1702841
12	20.1	5.0	0.0	chr18	9335075	9335114	(71038171)	+	G-rich	Low_complexity	1	42	(0)	1702842
15	20.9	1.6	6.3	chr18	9914178	9914239	(70459046)	+	(GCCGCC)n	Simple_repeat	1	63	(0)	1703864
15	28.6	2.5	3.6	chr18	10454697	10454777	(69918508)	+	(GGCCG)n	Simple_repeat	1	83	(0)	1704580
19	28.8	1.5	0.0	chr18	11689657	11689723	(68683562)	+	(CCGGCC)n	Simple_repeat	1	68	(0)	1706192
15	4.8	0.0	0.0	chr18	12948064	12948085	(67425200)	+	(CGC)n	Simple_repeat	1	22	(0)	1708433
927	15.4	2.7	2.1	chr18	12959644	12959829	(67413456)	C	L1MB4	LINE/L1	(924)	5222	5036	1708456
503	26.3	1.4	2.8	chr18	12959831	12959971	(67413314)	C	PrimLTR79	LTR/ERV1	(0)	503	365	1708462
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
12	25.1	0.0	4.3	chr18	21242856	21242901	(59130384)	+	G-rich	Low_complexity	1	46	(0)	1712210
2407	9.8	0.0	0.3	chr18	21428711	21429017	(58944268)	C	AluSq2	SINE/Alu	(7)	306	1	1712562
340	18.1	0.0	0.0	chr18	21429018	21429089	(58944196)	C	L1M4	LINE/L1	(2360)	3786	3715	1712563
48	6.0	2.7	1.3	chr18	21429110	21429182	(58944103)	+	(CCTT)n	Simple_repeat	1	75	(0)	1712564
37	35.4	0.7	2.0	chr18	21429185	21429333	(58943952)	+	(TCCCT)n	Simple_repeat	1	150	(0)	1712565
1041	20.1	0.0	0.0	chr18	21429343	21429506	(58943779)	C	FRAM	SINE/Alu	(12)	164	1	1712566
2186	6.9	0.0	0.7	chr18	21611831	21612107	(58761178)	C	AluSq	SINE/Alu	(5)	308	34	1712919
13	22.5	3.1	6.1	chr18	21741298	21741361	(58631924)	+	(CCG)n	Simple_repeat	1	66	(0)	1713218
29	5.9	0.0	0.0	chr18	21741528	21741563	(58631722)	+	(CGG)n	Simple_repeat	1	36	(0)	1713219
49	11.3	4.5	0.0	chr18	21748345	21748433	(58624852)	+	(CTCC)n	Simple_repeat	1	93	(0)	1713234
1878	18.9	1.7	0.7	chr18	21748434	21748730	(58624555)	C	AluJb	SINE/Alu	(12)	300	1	1713235
13	23.1	2.1	2.1	chr18	22171239	22171285	(58202000)	+	(CCTCCT)n	Simple_repeat	1	48	(0)	1714088
2308	9.8	0.7	0.0	chr18	23058310	23058605	(57314680)	C	AluSp	SINE/Alu	(15)	298	1	1715500
2336	8.8	0.0	0.3	chr18	23093616	23093910	(57279375)	C	AluY	SINE/Alu	(16)	295	2	1715589
1589	14.7	3.5	5.8	chr18	23093911	23094051	(57279234)	C	AluJr	SINE/Alu	(179)	133	1	1715588
444	35.1	9.5	3.6	chr18	23423596	23424289	(56948996)	C	L2c	LINE/L2	(101)	3286	2507	1716171
13	14.4	3.2	0.0	chr18	23586439	23586469	(56786816)	+	(GCAGGA)n	Simple_repeat	1	32	(0)	1716472
440	37.2	3.4	4.2	chr18	23661921	23662156	(56711129)	+	MIRb	SINE/MIR	35	268	(0)	1716624
25	8.4	0.0	0.0	chr18	23662614	23662651	(56710634)	+	(CCCAC)n	Simple_repeat	1	38	(0)	1716625
19	20.0	5.6	2.6	chr18	23662652	23662692	(56710593)	+	(GCCCA)n	Simple_repeat	2	82	(0)	1716626
17	20.7	3.9	1.9	chr18	23662832	23662883	(56710402)	+	(GCC)n	Simple_repeat	1	54	(0)	1716627
753	30.5	13.3	2.8	chr18	23794990	23795525	(56577760)	+	Tigger15a	DNA/TcMar-Tigger	20	620	(95)	1716875
650	26.8	28.5	4.8	chr18	23944491	23944852	(56428433)	C	L2c	LINE/L2	(143)	3283	2838	1717098
15	20.0	3.6	3.5	chr18	24014646	24014700	(56358585)	+	(CCGCGG)n	Simple_repeat	1	57	(0)	1717217
26	0.0	0.0	0.0	chr18	24014742	24014766	(56358519)	+	(CTCCC)n	Simple_repeat	1	25	(0)	1717218
24	20.8	3.3	0.0	chr18	24014886	24014946	(56358339)	+	(GCG)n	Simple_repeat	1	63	(0)	1717219
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
13	9.3	0.0	0.0	chr18	24426263	24426285	(55947000)	+	(AAAC)n	Simple_repeat	1	23	(0)	1717928
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
237	31.2	11.8	0.0	chr18	24427051	24427162	(55946123)	+	MIRc	SINE/MIR	26	152	(116)	1717930
37	25.6	0.9	1.8	chr18	25351813	25351922	(55021363)	+	(GGC)n	Simple_repeat	1	111	(0)	1719215
27	10.9	2.0	1.9	chr18	25351924	25351974	(55021311)	+	(GAG)n	Simple_repeat	1	52	(0)	1719216
59	13.5	5.7	4.2	chr18	25352287	25352445	(55020840)	+	(GCC)n	Simple_repeat	1	168	(0)	1719217
317	36.8	4.2	1.6	chr18	25366384	25366571	(55006714)	+	X6A_LINE	LINE/CR1	468	660	(420)	1719237
383	25.0	8.4	1.2	chr18	25366572	25366737	(55006548)	C	MER91A	DNA/hAT-Tip100	(0)	196	18	1719238
15	13.5	2.2	6.4	chr18	26548692	26548737	(53824548)	+	G-rich	Low_complexity	1	47	(0)	1721099
14	24.0	0.0	0.0	chr18	26548917	26548955	(53824330)	+	G-rich	Low_complexity	1	39	(0)	1721100
14	21.5	2.2	2.2	chr18	26549018	26549062	(53824223)	+	G-rich	Low_complexity	1	46	(0)	1721100
11	24.8	4.5	4.3	chr18	26549165	26549231	(53824054)	+	(CGGCGG)n	Simple_repeat	1	70	(0)	1721101
11	21.1	2.5	2.4	chr18	26656450	26656489	(53716796)	+	G-rich	Low_complexity	1	41	(0)	1721302
12	17.0	7.5	0.0	chr18	26656783	26656822	(53716463)	+	G-rich	Low_complexity	1	43	(0)	1721303
11	22.4	3.9	3.8	chr18	27185251	27185301	(53187984)	+	(GCGGAGC)n	Simple_repeat	1	53	(0)	1722061
7345	22.7	3.8	2.8	chr18	27258947	27260637	(53112648)	C	L1PREC2	LINE/L1	(6374)	1781	73	1722178
24	22.9	2.7	1.3	chr18	28176821	28176893	(52196392)	+	(GCGGC)n	Simple_repeat	1	75	(0)	1723415
15	17.1	2.4	2.4	chr18	28176906	28176946	(52196339)	+	(CCCCG)n	Simple_repeat	1	42	(0)	1723416
15	14.7	6.2	2.0	chr18	28177023	28177057	(52196228)	+	GA-rich	Low_complexity	1	37	(0)	1723417
28	0.0	0.0	0.0	chr18	28177058	28177083	(52196202)	+	(GGC)n	Simple_repeat	1	26	(0)	1723418
15	14.7	6.2	2.0	chr18	28177084	28177095	(52196190)	+	GA-rich	Low_complexity	38	49	(0)	1723419
12	30.1	0.0	3.5	chr18	28177146	28177202	(52196083)	+	(CCCCGCT)n	Simple_repeat	1	57	(0)	1723420
1758	18.3	4.2	0.3	chr18	28836758	28837057	(51536228)	+	AluJb	SINE/Alu	1	312	(0)	1724247
42	11.2	1.1	5.6	chr18	28837058	28837210	(51536075)	+	G-rich	Low_complexity	1	146	(0)	1724248
332	12.1	1.7	0.0	chr18	28837212	28837269	(51536016)	+	HSMAR2	DNA/TcMar-Mariner	41	99	(1203)	1724249
1108	17.2	9.9	1.3	chr18	28837269	28837498	(51535787)	C	MSTA	LTR/ERVL-MaLR	(176)	252	1	1724250
7619	15.5	8.4	6.0	chr18	28837499	28839035	(51534250)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1580	3	1724250
16	25.7	1.8	1.7	chr18	31102451	31102507	(49270778)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	1727208
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
3078	7.7	4.0	1.6	chr18	31616253	31616689	(48756596)	C	L1PA8	LINE/L1	(17)	6155	5708	1727949
220	35.3	9.7	0.0	chr18	31616995	31617096	(48756189)	+	L2b	LINE/L2	3245	3357	(18)	1727950
16	28.8	2.5	2.5	chr18	31684626	31684704	(48688581)	+	G-rich	Low_complexity	1	81	(0)	1728040
18	24.3	6.3	1.2	chr18	31685553	31685631	(48687654)	+	(CCG)n	Simple_repeat	1	84	(0)	1728041
1714	17.1	2.1	1.8	chr18	31696985	31697265	(48676020)	+	AluJb	SINE/Alu	1	282	(30)	1728060
1928	19.7	5.2	13.3	chr18	31697266	31697757	(48675528)	C	MER87	LTR/ERV1	(89)	452	1	1728059
49	0.0	0.0	0.0	chr18	32093106	32093150	(48280135)	+	(CTCCCGCT)n	Simple_repeat	1	45	(0)	1728828
18	25.0	0.0	3.3	chr18	32470449	32470508	(47902777)	+	(CCG)n	Simple_repeat	1	60	(0)	1729399
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
711	29.5	17.4	3.5	chr18	32492373	32493279	(47880006)	C	HAL1	LINE/L1	(559)	1948	890	1729440
28	9.8	0.0	0.0	chr18	32772085	32772128	(47601157)	+	(CCCG)n	Simple_repeat	1	44	(0)	1729866
2673	13.1	1.9	0.9	chr18	32884981	32885404	(47487881)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1730033
44	19.8	1.0	1.0	chr18	33429296	33429392	(46943893)	+	GA-rich	Low_complexity	1	98	(0)	1730713
17	22.0	2.0	2.0	chr18	33440758	33440807	(46932478)	+	(GCG)n	Simple_repeat	1	51	(0)	1730735
17	32.4	2.9	0.0	chr18	33578113	33578181	(46795104)	+	(GC)n	Simple_repeat	1	71	(0)	1730902
46	24.3	2.0	2.6	chr18	33578269	33578458	(46794827)	+	(CCGCCC)n	Simple_repeat	1	188	(0)	1730903
47	2.2	0.0	0.0	chr18	33578459	33578505	(46794780)	+	(CCG)n	Simple_repeat	1	47	(0)	1730904
46	24.3	2.0	2.6	chr18	33578506	33578519	(46794766)	+	(CCGCCC)n	Simple_repeat	1	13	(0)	1730905
480	31.4	8.6	8.9	chr18	33589956	33590270	(46783015)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	282	1730921
9279	12.7	10.4	2.1	chr18	35270738	35272181	(45101104)	C	LTR12C	LTR/ERV1	(0)	1579	2	1733084
27	0.0	0.0	0.0	chr18	35343851	35343876	(45029409)	+	(CCCGGC)n	Simple_repeat	1	26	(0)	1733185
215	26.3	2.6	2.6	chr18	35344651	35344728	(45028557)	C	MIRc	SINE/MIR	(18)	250	173	1733186
27	13.7	3.5	1.7	chr18	35581439	35581496	(44791789)	+	(CGC)n	Simple_repeat	1	60	(0)	1733545
4946	12.2	3.3	2.0	chr18	35597874	35597988	(44775297)	C	L1MA4	LINE/L1	(130)	7589	7473	1733568
51	5.2	0.0	0.0	chr18	35597989	35598048	(44775237)	+	(CTCCC)n	Simple_repeat	1	60	(0)	1733569
2088	11.3	3.1	0.0	chr18	35598049	35598332	(44774953)	C	AluSx1	SINE/Alu	(17)	295	3	1733570
20023	14.1	2.1	1.0	chr18	36078870	36083225	(44290060)	+	L1PB1	LINE/L1	3	4472	(2390)	1734266
18	14.9	0.0	0.0	chr18	36298760	36298789	(44074496)	+	(T)n	Simple_repeat	1	30	(0)	1734615
298	33.6	0.8	0.0	chr18	36500108	36500226	(43873059)	C	L2	LINE/L2	(508)	2911	2792	1734875
5816	24.6	7.0	3.5	chr18	36711765	36713517	(43659768)	+	L1MDa	LINE/L1	282	2429	(4204)	1735119
12	18.1	2.4	4.8	chr18	36828617	36828657	(43544628)	+	(CCT)n	Simple_repeat	1	42	(0)	1735268
6327	8.6	17.8	2.7	chr18	38639409	38640476	(41732809)	C	MER11A	LTR/ERVK	(0)	1266	3	1737667
52	0.0	0.0	0.0	chr18	39778414	39778460	(40594825)	+	(AAAT)n	Simple_repeat	1	47	(0)	1739169
2544	5.6	0.0	1.3	chr18	39799487	39799788	(40573497)	+	AluY	SINE/Alu	3	300	(11)	1739191
1697	17.6	1.2	5.1	chr18	39799789	39800030	(40573255)	C	MER61-int	LTR/ERV1	(4815)	402	161	1739189
1669	16.7	5.0	3.0	chr18	39800102	39800435	(40572850)	C	MER61A	LTR/ERV1	(0)	341	1	1739189
4999	12.8	2.2	2.4	chr18	43541920	43542719	(36830566)	C	LTR1A1	LTR/ERV1	(0)	799	1	1744346
1707	22.9	5.2	4.1	chr18	43542720	43543068	(36830217)	+	MLT1C	LTR/ERVL-MaLR	109	467	(0)	1744345
1710	15.1	2.3	2.7	chr18	44894867	44895125	(35478160)	+	AluJr	SINE/Alu	37	294	(18)	1746105
80	11.6	4.8	4.5	chr18	44895155	44895343	(35477942)	+	GA-rich	Low_complexity	1	198	(0)	1746106
330	30.7	2.4	2.4	chr18	47440200	47440342	(32932943)	C	L2b	LINE/L2	(11)	3415	3222	1750206
40	9.6	4.3	1.4	chr18	47440508	47440577	(32932708)	+	GA-rich	Low_complexity	1	73	(0)	1750207
16	14.4	2.5	2.4	chr18	47930512	47930556	(32442729)	+	G-rich	Low_complexity	1	45	(0)	1751013
37	9.5	0.0	0.0	chr18	47930558	47930614	(32442671)	+	(GGGAG)n	Simple_repeat	1	57	(0)	1751014
14	10.4	6.5	0.0	chr18	47930805	47930835	(32442450)	+	(GGCT)n	Simple_repeat	1	33	(0)	1751015
17	25.6	0.0	3.4	chr18	48008319	48008377	(32364908)	+	G-rich	Low_complexity	1	59	(0)	1751162
13	27.6	4.1	2.6	chr18	48008366	48008375	(32364910)	+	(CGGCCC)n	Simple_repeat	1	22	(54)	1751163
13	17.6	2.4	4.7	chr18	48008376	48008417	(32364868)	+	(CCT)n	Simple_repeat	1	43	(0)	1751164
13	27.6	4.1	2.6	chr18	48008418	48008438	(32364847)	+	(CGGCCC)n	Simple_repeat	23	76	(0)	1751163
220	21.9	0.0	0.0	chr18	48008702	48008742	(32364543)	+	L2c	LINE/L2	3344	3384	(3)	1751165
1035	26.2	2.6	3.9	chr18	48020224	48020642	(32352643)	C	MER115	DNA/hAT-Tip100	(3)	690	213	1751186
15	22.0	2.0	2.0	chr18	48539845	48539893	(31833392)	+	G-rich	Low_complexity	1	50	(0)	1752079
12	27.4	1.1	1.1	chr18	48540348	48540414	(31832871)	+	G-rich	Low_complexity	1	67	(0)	1752080
180	34.9	8.6	1.9	chr18	48733060	48733167	(31640118)	+	MamTip2	DNA/hAT-Tip100	113	228	(77)	1752366
14	12.3	5.4	2.6	chr18	48828892	48828928	(31544357)	+	(CCT)n	Simple_repeat	1	39	(0)	1752501
6506	8.5	17.4	0.8	chr18	49244922	49245975	(31127310)	+	MER11A	LTR/ERVK	1	1266	(0)	1753171
426	25.7	10.7	0.9	chr18	49245982	49246091	(31127194)	C	MIR	SINE/MIR	(27)	235	114	1753172
6573	8.8	17.6	0.9	chr18	50241497	50242547	(30130738)	C	MER11A	LTR/ERVK	(1)	1265	2	1754840
34	8.8	0.0	0.0	chr18	54224199	54224247	(26149038)	+	(CGC)n	Simple_repeat	1	49	(0)	1760916
57	16.2	0.8	3.2	chr18	54224273	54224397	(26148888)	+	(CGGCCC)n	Simple_repeat	1	126	(0)	1760917
353	29.5	19.1	3.7	chr18	54421748	54422177	(25951108)	C	LTR79	LTR/ERVL	(10)	517	6	1761207
629	21.5	3.4	4.3	chr18	57598211	57598247	(22775038)	+	HAL1	LINE/L1	2165	2200	(307)	1765797
2212	15.6	6.6	0.8	chr18	57598248	57598647	(22774638)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	1765806
13	17.2	4.9	2.3	chr18	58044093	58044133	(22329152)	+	(CCGC)n	Simple_repeat	1	43	(0)	1766702
14	12.0	0.0	3.5	chr18	58044202	58044230	(22329055)	+	GA-rich	Low_complexity	1	29	(0)	1766703
13	17.4	2.3	4.5	chr18	58044643	58044685	(22328600)	+	(GCGCCGG)n	Simple_repeat	1	44	(0)	1766704
15	27.2	0.0	6.7	chr18	58671348	58671422	(21701863)	+	(GCCCC)n	Simple_repeat	1	75	(0)	1767638
15	28.2	0.0	7.2	chr18	58671867	58671949	(21701336)	+	(GCGG)n	Simple_repeat	1	83	(0)	1767639
660	20.7	2.2	4.4	chr18	58910088	58910227	(21463058)	C	L1MC4a	LINE/L1	(40)	7842	7704	1768121
573	25.1	4.9	3.5	chr18	58910237	58910470	(21462815)	C	L1MC3	LINE/L1	(1499)	6383	6115	1768115
2098	12.8	0.0	2.6	chr18	58910471	58910774	(21462511)	C	AluSz	SINE/Alu	(16)	296	1	1768123
2111	12.5	5.1	0.0	chr18	59254493	59254787	(21118498)	C	AluSx1	SINE/Alu	(1)	311	1	1768692
739	25.7	9.2	11.1	chr18	59254788	59254954	(21118331)	C	MLT1J	LTR/ERVL-MaLR	(147)	365	197	1768690
10296	5.0	0.4	7.8	chr18	59254955	59256444	(21116841)	+	SVA_B	Retroposon/SVA	4	1383	(0)	1768693
37	32.3	2.0	2.6	chr18	69162886	69163038	(11210247)	+	(TTCCT)n	Simple_repeat	1	156	(0)	1782816
559	29.8	5.6	4.1	chr18	69838496	69838740	(10534545)	C	MIR	SINE/MIR	(2)	260	12	1783743
28	30.3	0.3	11.0	chr18	69839094	69839427	(10533858)	+	(CCTCC)n	Simple_repeat	1	335	(0)	1783744
4438	19.3	3.1	3.2	chr18	70666120	70667177	(9706108)	C	L1MA9	LINE/L1	(927)	5915	4859	1784939
133	13.2	2.5	3.5	chr18	70667183	70667458	(9705827)	+	(TCCCT)n	Simple_repeat	1	283	(0)	1784941
2018	13.9	1.3	1.3	chr18	71851978	71852286	(8520999)	C	AluSz6	SINE/Alu	(3)	309	1	1786463
257	33.8	4.8	2.1	chr18	75551730	75551871	(4821414)	C	L2a	LINE/L2	(265)	3161	3016	1791124
13	20.4	0.0	2.8	chr18	75552057	75552092	(4821193)	+	GA-rich	Low_complexity	1	36	(0)	1791126
2738	23.0	2.3	2.6	chr18	75552235	75552885	(4820400)	+	Tigger17a	DNA/TcMar-Tigger	5	653	(1)	1791127
413	12.7	4.1	0.0	chr18	78652727	78652797	(1720488)	+	MER81	DNA/hAT-Blackjack	22	95	(19)	1794753
635	10.0	3.5	3.5	chr18	78957064	78957177	(1416108)	+	THE1D	LTR/ERVL-MaLR	1	114	(267)	1795026
1636	12.5	5.7	1.3	chr18	78957558	78957857	(1415428)	+	THE1D	LTR/ERVL-MaLR	68	381	(0)	1795026
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
12	13.5	2.8	5.4	chr18	79396185	79396220	(977065)	+	(GCC)n	Simple_repeat	1	37	(0)	1795471
413	23.7	0.0	1.0	chr18	79649278	79649375	(723910)	C	L1MC5	LINE/L1	(154)	9150	9054	1795644
1767	13.8	0.3	4.5	chr18	79746635	79746924	(626361)	C	AluJr4	SINE/Alu	(30)	282	5	1795738
1237	27.4	5.6	8.7	chr18	79912185	79912735	(460550)	+	L1MB7	LINE/L1	5570	6102	(82)	1795890
3347	10.9	9.1	2.3	chr18	80164637	80165692	(207593)	C	MER11A	LTR/ERVK	(1)	1235	3	1796224
693	22.5	11.0	4.4	chr18	80226040	80226151	(147134)	C	L1ME4b	LINE/L1	(0)	892	756	1796292
68	36.2	0.0	0.0	chr19	291432	291684	(58325932)	+	G-rich	Low_complexity	1	253	(0)	1796697
977	30.0	5.6	0.9	chr19	447047	447473	(58170143)	+	L1MB7	LINE/L1	5712	6161	(23)	1796925
12	15.3	3.5	0.0	chr19	461976	462004	(58155612)	+	G-rich	Low_complexity	1	30	(0)	1796955
12	15.7	2.6	5.0	chr19	462094	462132	(58155484)	+	(CGCGGT)n	Simple_repeat	1	40	(0)	1796956
28	23.0	6.9	4.1	chr19	489272	489430	(58128186)	+	(CCCCGAC)n	Simple_repeat	1	170	(0)	1797014
412	29.3	10.0	4.4	chr19	525404	525767	(58091849)	+	L2b	LINE/L2	2959	3394	(32)	1797082
106	18.4	1.9	3.4	chr19	525769	526026	(58091590)	+	GA-rich	Low_complexity	1	263	(0)	1797083
1286	23.0	16.3	1.4	chr19	526064	526491	(58091125)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	1797084
428	24.2	0.0	1.2	chr19	549328	549440	(58068176)	C	MIRc	SINE/MIR	(120)	148	38	1797120
12	17.5	3.1	0.0	chr19	549846	549877	(58067739)	+	G-rich	Low_complexity	1	33	(0)	1797121
1459	8.1	0.0	0.0	chr19	549987	550172	(58067444)	C	AluSx3	SINE/Alu	(125)	186	1	1797122
352	23.1	4.4	0.9	chr19	550342	550450	(58067166)	C	L1MB7	LINE/L1	(0)	6184	6072	1797123
2209	9.3	0.3	0.0	chr19	559373	559661	(58057955)	C	AluSp	SINE/Alu	(18)	295	6	1797149
722	31.2	0.0	0.4	chr19	559666	559903	(58057713)	C	L1MB7	LINE/L1	(188)	5996	5760	1797150
2292	7.3	0.0	3.8	chr19	570144	570458	(58047158)	C	AluSg7	SINE/Alu	(6)	303	1	1797170
3983	11.0	4.2	4.0	chr19	570459	570617	(58046999)	C	HERVIP10B3-int	LTR/ERV1	(6429)	1174	999	1797168
193	19.6	1.9	0.0	chr19	589614	589664	(58027952)	+	MIR1_Amn	SINE/MIR	90	141	(89)	1797192
3848	9.7	4.1	2.0	chr19	668599	669599	(57948017)	+	MER11A	LTR/ERVK	1	1266	(0)	1797331
14	21.1	0.0	2.5	chr19	677195	677234	(57940382)	+	(CCCCA)n	Simple_repeat	1	40	(0)	1797351
2431	7.0	0.0	1.3	chr19	771058	771372	(57846244)	+	AluY	SINE/Alu	1	311	(0)	1797566
317	29.8	5.3	0.9	chr19	771406	771622	(57845994)	+	L2	LINE/L2	2783	3009	(410)	1797567
18	19.9	1.5	6.1	chr19	797519	797583	(57820033)	+	(CGCCC)n	Simple_repeat	1	66	(0)	1797635
14	7.2	0.0	8.6	chr19	797642	797676	(57819940)	+	G-rich	Low_complexity	1	35	(0)	1797636
236	30.5	4.5	2.1	chr19	871629	871739	(57745877)	C	L2a	LINE/L2	(27)	3399	3264	1797796
86	6.8	0.0	7.4	chr19	871755	871916	(57745700)	+	(GGGAGAG)n	Simple_repeat	1	162	(0)	1797797
14	20.1	0.0	0.0	chr19	1000890	1000923	(57616693)	+	(GAGCGG)n	Simple_repeat	1	34	(0)	1798056
13	17.5	0.0	2.9	chr19	1067112	1067145	(57550471)	+	G-rich	Low_complexity	1	34	(0)	1798166
13	27.0	2.0	0.0	chr19	1113484	1113547	(57504069)	+	(CCACCCG)n	Simple_repeat	1	65	(0)	1798238
381	30.4	4.8	2.1	chr19	1113958	1114098	(57503518)	+	MIR	SINE/MIR	42	186	(76)	1798239
1404	12.8	0.5	5.3	chr19	1141697	1141922	(57475694)	C	AluJo	SINE/Alu	(97)	215	1	1798281
2529	7.7	0.0	0.0	chr19	1194128	1194437	(57423179)	C	AluSx1	SINE/Alu	(2)	310	1	1798383
2525	3.1	0.0	0.0	chr19	1194867	1195189	(57422427)	C	AluYb8	SINE/Alu	(0)	318	1	1798384
12	22.4	1.9	5.7	chr19	1248809	1248860	(57368756)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1798465
12	13.9	6.2	0.0	chr19	1249461	1249492	(57368124)	+	(GCCCGC)n	Simple_repeat	1	34	(0)	1798466
18	22.4	0.0	0.0	chr19	1265708	1265744	(57351872)	+	G-rich	Low_complexity	1	37	(0)	1798482
145	29.9	4.6	2.5	chr19	1282063	1282763	(57334853)	+	GA-rich	Low_complexity	1	733	(0)	1798496
13	25.2	0.0	2.3	chr19	1283032	1283075	(57334541)	+	(CCCGTGC)n	Simple_repeat	1	44	(0)	1798497
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
307	25.0	19.4	0.0	chr19	1445568	1445671	(57171945)	+	L2c	LINE/L2	3288	3423	(3)	1798791
186	35.1	0.0	0.0	chr19	1445693	1445769	(57171847)	+	L2b	LINE/L2	3297	3373	(2)	1798792
14	8.2	0.0	3.6	chr19	1446250	1446277	(57171339)	+	(GGGGC)n	Simple_repeat	1	28	(0)	1798793
2298	9.7	0.3	0.3	chr19	1500418	1500717	(57116899)	+	AluSc5	SINE/Alu	1	300	(9)	1798885
432	18.9	5.8	0.2	chr19	1500718	1500868	(57116748)	C	L2b	LINE/L2	(346)	3073	2923	1798886
2278	10.7	0.3	0.0	chr19	1500922	1501219	(57116397)	C	AluSp	SINE/Alu	(14)	299	1	1798887
11	18.4	2.4	4.8	chr19	1508287	1508327	(57109289)	+	G-rich	Low_complexity	1	42	(0)	1798898
239	29.6	9.1	0.6	chr19	1508661	1508757	(57108859)	C	MIR3	SINE/MIR	(85)	123	28	1798899
199	3.0	8.3	2.9	chr19	1514257	1514290	(57103326)	C	L2b	LINE/L2	(18)	3357	3322	1798911
511	23.9	1.2	0.6	chr19	1705417	1706210	(56911406)	+	(ATGG)n	Simple_repeat	4	798	(0)	1799346
180	24.6	5.0	1.7	chr19	1747689	1747746	(56869870)	C	L2b	LINE/L2	(0)	3375	3316	1799451
249	21.0	3.6	8.0	chr19	1747795	1747882	(56869734)	+	L2c	LINE/L2	3066	3149	(238)	1799452
11	16.4	2.1	8.2	chr19	1748311	1748358	(56869258)	+	(GCCAG)n	Simple_repeat	1	49	(0)	1799453
12	17.5	3.1	0.0	chr19	1775630	1775661	(56841955)	+	(CCTC)n	Simple_repeat	1	33	(0)	1799495
217	14.6	0.0	2.5	chr19	1862606	1862652	(56754964)	C	MIR3	SINE/MIR	(59)	149	104	1799635
13	20.3	0.0	4.7	chr19	1863914	1863956	(56753660)	+	(CCCCGC)n	Simple_repeat	1	43	(0)	1799636
38	4.3	2.1	0.0	chr19	1946257	1946304	(56671312)	+	(TATT)n	Simple_repeat	1	49	(0)	1799814
2439	5.3	0.0	0.0	chr19	1946305	1946589	(56671027)	C	AluY	SINE/Alu	(25)	286	2	1799815
54	34.4	1.4	0.0	chr19	2016250	2016457	(56601159)	+	(CCAGACC)n	Simple_repeat	1	211	(0)	1799948
20	22.1	5.9	0.0	chr19	2164004	2164030	(56453586)	+	(GAGGCC)n	Simple_repeat	1	56	(16)	1800274
20	12.6	0.0	0.0	chr19	2164031	2164065	(56453551)	+	(GCG)n	Simple_repeat	1	35	(0)	1800275
20	22.1	5.9	0.0	chr19	2164066	2164071	(56453545)	+	(GAGGCC)n	Simple_repeat	57	72	(0)	1800274
20	23.1	1.4	4.2	chr19	2164084	2164154	(56453462)	+	(CCGC)n	Simple_repeat	1	72	(0)	1800276
2384	7.7	0.0	0.0	chr19	2599655	2599951	(56017665)	+	AluSx	SINE/Alu	1	297	(15)	1801198
2364	9.4	0.0	0.0	chr19	2638083	2638381	(55979235)	+	AluSg7	SINE/Alu	1	299	(10)	1801308
94	10.1	1.5	6.1	chr19	2638383	2638577	(55979039)	+	G-rich	Low_complexity	1	198	(0)	1801309
414	21.4	6.4	0.0	chr19	2638645	2638747	(55978869)	C	MER20	DNA/hAT-Charlie	(81)	138	29	1801310
375	26.5	4.5	0.7	chr19	2982558	2982698	(55634918)	C	L2	LINE/L2	(458)	2961	2814	1802086
842	27.7	15.1	4.2	chr19	2983201	2983942	(55633674)	C	L2a	LINE/L2	(2)	3424	2570	1802087
15	21.2	0.0	4.3	chr19	3036342	3036388	(55581228)	+	(CTCC)n	Simple_repeat	1	47	(0)	1802227
191	30.0	0.0	0.0	chr19	3036691	3036740	(55580876)	+	MIR3	SINE/MIR	110	159	(49)	1802228
2409	10.3	0.0	0.0	chr19	3037003	3037314	(55580302)	+	AluSx	SINE/Alu	1	312	(0)	1802229
196	22.2	0.0	0.0	chr19	3062711	3062746	(55554870)	+	MIR3	SINE/MIR	114	149	(59)	1802286
18	12.2	0.0	0.0	chr19	3359258	3359284	(55258332)	+	(GT)n	Simple_repeat	1	27	(0)	1803048
13	26.5	0.0	0.0	chr19	3359285	3359293	(55258323)	+	(GCGT)n	Simple_repeat	3	38	(0)	1803049
17	23.2	1.7	3.3	chr19	3359550	3359608	(55258008)	+	(CCCT)n	Simple_repeat	1	60	(0)	1803050
42	30.4	5.0	1.3	chr19	3366345	3366566	(55251050)	+	G-rich	Low_complexity	1	233	(0)	1803067
12	9.8	0.0	11.9	chr19	3366593	3366634	(55250982)	+	(GCCC)n	Simple_repeat	1	42	(0)	1803068
13	20.9	6.1	4.3	chr19	3403678	3403743	(55213873)	+	(CTCCTGC)n	Simple_repeat	1	70	(0)	1803177
13	24.9	2.0	2.0	chr19	3403808	3403856	(55213760)	+	(GCCCC)n	Simple_repeat	1	50	(0)	1803178
16	16.4	0.0	0.0	chr19	3404320	3404353	(55213263)	+	G-rich	Low_complexity	1	34	(0)	1803179
278	27.1	0.0	6.9	chr19	4058268	4058384	(54559232)	+	MIR3	SINE/MIR	42	151	(57)	1804641
11	19.8	8.2	3.0	chr19	4066330	4066390	(54551226)	+	(CTCCCCG)n	Simple_repeat	1	66	(0)	1804654
251	28.4	0.8	0.3	chr19	4197343	4198009	(54419607)	+	(AATG)n	Simple_repeat	1	672	(0)	1805012
14	20.6	6.2	5.8	chr19	4198298	4198378	(54419238)	+	G-rich	Low_complexity	1	86	(0)	1805013
14	8.3	0.0	3.6	chr19	4198577	4198604	(54419012)	+	(CCTCC)n	Simple_repeat	1	28	(0)	1805014
13	18.5	2.6	2.5	chr19	4598445	4598483	(54019133)	+	(CTCC)n	Simple_repeat	1	40	(0)	1805965
506	7.6	2.9	0.0	chr19	4786383	4786448	(53831168)	C	AluSx3	SINE/Alu	(30)	281	214	1806468
618	30.6	0.0	7.3	chr19	4786794	4786888	(53830728)	C	MER63C	DNA/hAT-Blackjack	(550)	380	288	1806469
2272	12.2	0.0	0.0	chr19	4786889	4787191	(53830425)	+	AluSc	SINE/Alu	1	303	(6)	1806470
16	15.4	2.8	0.0	chr19	5113124	5113159	(53504457)	+	(CCTGG)n	Simple_repeat	1	37	(0)	1807214
16	0.0	0.0	0.0	chr19	5113337	5113353	(53504263)	+	(T)n	Simple_repeat	1	17	(0)	1807215
15	13.7	0.0	0.0	chr19	5128848	5128871	(53488745)	+	(G)n	Simple_repeat	1	24	(0)	1807230
1080	17.9	0.0	0.6	chr19	5388410	5388582	(53229034)	+	AluJb	SINE/Alu	121	292	(20)	1807850
109	9.7	2.2	1.6	chr19	5388583	5388764	(53228852)	+	(GGGGA)n	Simple_repeat	1	186	(0)	1807851
219	39.1	3.8	2.6	chr19	5388779	5388933	(53228683)	C	L2c	LINE/L2	(614)	2805	2649	1807847
835	20.7	6.5	1.0	chr19	6047937	6048141	(52569475)	C	MER20	DNA/hAT-Charlie	(2)	217	1	1809334
2363	8.8	0.0	0.0	chr19	6160818	6161112	(52456504)	+	AluSx	SINE/Alu	1	295	(17)	1809584
12	16.6	0.0	0.0	chr19	6161441	6161467	(52456149)	+	A-rich	Low_complexity	1	27	(0)	1809585
259	18.8	2.8	8.0	chr19	6161822	6161896	(52455720)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	525	1809586
1978	12.9	0.7	7.8	chr19	6180917	6181269	(52436347)	+	AluSz	SINE/Alu	2	312	(0)	1809631
26	3.5	0.0	0.0	chr19	6181270	6181299	(52436317)	+	(GGGAG)n	Simple_repeat	1	30	(0)	1809632
34	24.1	0.7	5.8	chr19	6181300	6181399	(52436217)	+	A-rich	Low_complexity	35	128	(0)	1809633
2422	23.8	3.3	5.3	chr19	6181400	6181967	(52435649)	C	L1ME3G	LINE/L1	(830)	5316	4743	1809629
2688	5.2	0.0	0.0	chr19	6196995	6197304	(52420312)	+	AluY	SINE/Alu	1	310	(1)	1809665
1894	11.0	6.4	0.0	chr19	6197509	6197804	(52419812)	C	AluSx1	SINE/Alu	(0)	312	1	1809666
219	25.8	0.0	8.8	chr19	6414470	6414537	(52203079)	C	MIRc	SINE/MIR	(75)	193	132	1810195
358	35.4	11.5	1.4	chr19	6460691	6460910	(52156706)	C	MIR	SINE/MIR	(1)	261	23	1810296
2318	9.9	0.0	3.1	chr19	6515655	6515976	(52101640)	+	AluSq2	SINE/Alu	2	313	(0)	1810456
253	16.4	9.0	0.0	chr19	6552215	6552275	(52065341)	C	MER52D	LTR/ERV1	(2053)	70	4	1810558
3191	12.6	1.7	1.0	chr19	6626449	6626963	(51990653)	C	LOR1-int	LTR/ERV1	(5619)	2501	1983	1810736
34	6.5	2.0	0.0	chr19	6626975	6627023	(51990593)	+	(CCTT)n	Simple_repeat	1	50	(0)	1810742
29	29.2	5.4	0.0	chr19	6627029	6627035	(51990581)	+	(CTCT)n	Simple_repeat	1	30	(88)	1810743
46	7.8	4.5	3.2	chr19	6627036	6627124	(51990492)	+	(CTTT)n	Simple_repeat	1	93	(0)	1810744
29	29.2	5.4	0.0	chr19	6627125	6627140	(51990476)	+	(CTCT)n	Simple_repeat	31	118	(0)	1810743
34	7.2	0.0	0.0	chr19	6627159	6627203	(51990413)	+	(CTTC)n	Simple_repeat	1	45	(0)	1810745
7568	10.6	7.5	5.9	chr19	6627204	6627266	(51990350)	C	LOR1-int	LTR/ERV1	(6148)	1972	1912	1810736
2364	9.0	0.0	1.0	chr19	6627267	6627566	(51990050)	C	AluY	SINE/Alu	(13)	298	2	1810746
13	25.3	6.0	1.4	chr19	7506305	7506327	(51111289)	+	(CCTGCC)n	Simple_repeat	1	41	(30)	1813104
12	20.0	0.0	0.0	chr19	7506328	7506356	(51111260)	+	(CCCCT)n	Simple_repeat	1	29	(0)	1813105
13	25.3	6.0	1.4	chr19	7506357	7506371	(51111245)	+	(CCTGCC)n	Simple_repeat	42	71	(0)	1813104
13	26.2	1.7	4.9	chr19	7874351	7874410	(50743206)	+	(GCG)n	Simple_repeat	1	61	(0)	1813881
16	23.7	0.0	3.8	chr19	7888424	7888476	(50729140)	+	G-rich	Low_complexity	1	53	(0)	1813921
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
1469	6.9	0.0	2.1	chr19	8268463	8268673	(50348943)	+	AluSx3	SINE/Alu	128	311	(0)	1814865
1133	20.2	6.4	0.8	chr19	8268675	8268923	(50348693)	+	L1M1	LINE/L1	118	381	(7184)	1814864
679	7.2	0.0	4.0	chr19	8268934	8269034	(50348582)	+	LTR13	LTR/ERVK	1	97	(910)	1814866
2296	6.5	1.1	0.4	chr19	9147331	9147635	(49469981)	C	AluY	SINE/Alu	(0)	311	2	1816914
2588	12.7	2.3	3.2	chr19	9147806	9148237	(49469379)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1816915
252	17.5	23.1	3.6	chr19	9309485	9309567	(49308049)	C	MER5A	DNA/hAT-Charlie	(0)	189	86	1817218
20	9.1	2.8	0.0	chr19	9309728	9309763	(49307853)	+	(GGGCA)n	Simple_repeat	1	37	(0)	1817219
17	15.8	3.6	5.3	chr19	9310184	9310238	(49307378)	+	G-rich	Low_complexity	1	57	(0)	1817220
734	14.9	0.0	8.1	chr19	9324511	9324658	(49292958)	+	FLAM_C	SINE/Alu	1	136	(7)	1817238
1879	8.2	1.9	0.0	chr19	9785201	9785456	(48832160)	C	AluSc	SINE/Alu	(9)	300	40	1818104
251	16.7	0.0	0.0	chr19	9786321	9786362	(48831254)	+	MLT1H	LTR/ERVL-MaLR	508	549	(0)	1818105
1118	16.2	3.6	1.4	chr19	10000058	10000276	(48617340)	+	MER87B	LTR/ERV1	286	509	(0)	1818663
386	25.7	4.1	9.1	chr19	10000389	10000452	(48617164)	+	L2	LINE/L2	2739	2801	(618)	1818664
32	0.0	0.0	0.0	chr19	10000453	10000482	(48617134)	+	(T)n	Simple_repeat	1	30	(0)	1818665
801	10.5	2.6	0.0	chr19	10000484	10000597	(48617019)	C	AluJr	SINE/Alu	(195)	117	1	1818666
386	25.7	4.1	9.1	chr19	10000598	10000684	(48616932)	+	L2	LINE/L2	2802	2882	(537)	1818664
347	26.5	1.0	3.1	chr19	10028025	10028144	(48589472)	+	MIR	SINE/MIR	45	168	(100)	1818727
463	31.9	12.3	3.2	chr19	10226314	10226533	(48391083)	+	MIRb	SINE/MIR	18	260	(2)	1819210
24	18.6	4.7	4.4	chr19	10226922	10227007	(48390609)	+	(CCCT)n	Simple_repeat	1	90	(0)	1819211
2490	7.5	0.0	0.3	chr19	10385792	10386097	(48231519)	C	AluY	SINE/Alu	(6)	305	1	1819609
196	29.4	9.6	0.0	chr19	10386098	10386182	(48231434)	C	MIRb	SINE/MIR	(81)	187	94	1819610
442	23.1	1.9	0.0	chr19	10386240	10386343	(48231273)	C	MER81	DNA/hAT-Blackjack	(4)	110	5	1819611
12	22.4	7.7	0.0	chr19	10416972	10417023	(48200593)	+	(GGCGAGG)n	Simple_repeat	1	56	(0)	1819689
22	0.0	0.0	0.0	chr19	10419057	10419080	(48198536)	+	(T)n	Simple_repeat	1	24	(0)	1819690
23	30.7	0.0	3.1	chr19	10420446	10420542	(48197074)	+	G-rich	Low_complexity	1	97	(0)	1819693
14	19.8	0.0	4.5	chr19	11090388	11090431	(47527185)	+	(GCCCCC)n	Simple_repeat	1	44	(0)	1821403
202	28.9	3.1	0.9	chr19	11155406	11155527	(47462089)	C	MIR1_Amn	SINE/MIR	(79)	189	63	1821596
14	16.7	2.9	0.0	chr19	11197889	11197922	(47419694)	+	G-rich	Low_complexity	1	35	(0)	1821708
418	19.9	0.0	0.0	chr19	11198073	11198160	(47419456)	+	MIR	SINE/MIR	105	191	(71)	1821709
38	2.8	0.0	0.0	chr19	11454450	11454486	(47163130)	+	(TC)n	Simple_repeat	1	37	(0)	1822370
1153	15.3	3.2	0.5	chr19	11612767	11612976	(47004640)	C	L1PA15	LINE/L1	(1)	6164	5949	1822799
816	16.4	4.2	10.0	chr19	11612977	11613061	(47004555)	C	L1MCa	LINE/L1	(1230)	5091	5007	1822794
58	6.4	3.7	4.4	chr19	11613063	11613171	(47004445)	+	(CCTCC)n	Simple_repeat	1	113	(0)	1822800
623	23.9	0.0	0.8	chr19	11613177	11613310	(47004306)	C	FLAM_C	SINE/Alu	(10)	133	1	1822801
1963	19.3	3.8	1.0	chr19	11647042	11647455	(46970161)	C	MSTC	LTR/ERVL-MaLR	(2)	426	1	1822866
680	29.8	2.9	4.1	chr19	11647456	11647547	(46970069)	C	MER68	LTR/ERVL	(307)	256	164	1822865
1574	20.2	4.0	9.9	chr19	11814743	11814993	(46802623)	C	LTR10B1	LTR/ERV1	(0)	547	295	1823182
3694	14.4	3.5	5.4	chr19	12366935	12367114	(46250502)	+	LTR38C	LTR/ERV1	198	364	(347)	1824316
4704	14.9	15.9	6.5	chr19	12367115	12367677	(46249939)	C	MER11B	LTR/ERVK	(0)	1236	524	1824318
1163	13.5	4.2	5.0	chr19	12733412	12733630	(45883986)	C	MER20	DNA/hAT-Charlie	(0)	219	3	1825104
313	29.9	5.6	0.8	chr19	12733634	12733751	(45883865)	C	MIRb	SINE/MIR	(20)	248	125	1825105
37	25.8	2.8	5.5	chr19	12838391	12838437	(45779179)	+	(CGC)n	Simple_repeat	1	56	(127)	1825335
15	11.6	0.0	0.0	chr19	12838438	12838465	(45779151)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1825336
37	25.8	2.8	5.5	chr19	12838466	12838568	(45779048)	+	(CGC)n	Simple_repeat	57	183	(0)	1825335
1931	9.9	1.4	7.7	chr19	12936934	12937245	(45680371)	C	AluSx1	SINE/Alu	(20)	292	1	1825579
20	26.7	4.6	1.1	chr19	12990438	12990524	(45627092)	+	(CCGCCC)n	Simple_repeat	1	91	(0)	1825715
334	18.7	0.0	3.9	chr19	13794663	13794740	(44822876)	C	MADE2	DNA/TcMar-Mariner	(0)	80	6	1827822
194	19.6	1.8	9.7	chr19	13794921	13794982	(44822634)	C	MIRc	SINE/MIR	(146)	122	66	1827823
13	10.4	2.9	5.6	chr19	13865274	13865308	(44752308)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	1828000
18	22.1	2.9	4.3	chr19	13952544	13952611	(44665005)	+	(GCG)n	Simple_repeat	1	70	(0)	1828204
13	17.9	2.4	4.7	chr19	14057474	14057515	(44560101)	+	(CCT)n	Simple_repeat	1	43	(0)	1828465
13	26.0	2.9	4.2	chr19	14057598	14057626	(44559990)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	1828466
17	22.7	0.0	0.0	chr19	14057627	14057662	(44559954)	+	G-rich	Low_complexity	1	36	(0)	1828467
2326	8.4	0.0	0.0	chr19	14057826	14058121	(44559495)	+	AluSx1	SINE/Alu	1	296	(16)	1828468
13	20.4	3.6	5.2	chr19	14248487	14248542	(44369074)	+	(GCCCCCA)n	Simple_repeat	1	58	(0)	1828948
36	25.6	2.7	3.9	chr19	14248619	14248767	(44368849)	+	(CCCT)n	Simple_repeat	1	153	(0)	1828949
833	17.6	0.0	0.0	chr19	14333920	14334074	(44283542)	+	FLAM_C	SINE/Alu	2	143	(0)	1829217
14	28.9	1.4	4.1	chr19	14433423	14433494	(44184122)	+	(CGCC)n	Simple_repeat	1	73	(0)	1829495
12	20.2	2.9	0.0	chr19	14480032	14480065	(44137551)	+	G-rich	Low_complexity	1	35	(0)	1829597
14	18.2	2.6	2.5	chr19	14518366	14518404	(44099212)	+	(CCG)n	Simple_repeat	1	40	(0)	1829698
12	11.9	4.8	6.8	chr19	14518474	14518515	(44099101)	+	(CCG)n	Simple_repeat	1	44	(0)	1829699
460	25.4	0.0	2.1	chr19	14786876	14787013	(43830603)	C	MIRb	SINE/MIR	(114)	154	19	1830378
304	20.0	12.0	3.1	chr19	15160242	15160339	(43457277)	C	L1M4c	LINE/L1	(4343)	2041	1934	1831252
19	17.9	7.0	0.0	chr19	15160554	15160610	(43457006)	+	A-rich	Low_complexity	1	61	(0)	1831253
11	15.5	5.1	8.1	chr19	15160750	15160808	(43456808)	+	(GGCAGT)n	Simple_repeat	1	62	(0)	1831254
18	6.5	2.9	2.9	chr19	15200026	15200059	(43417557)	+	(GGGGA)n	Simple_repeat	1	35	(0)	1831350
16	23.5	1.9	1.9	chr19	15200202	15200254	(43417362)	+	G-rich	Low_complexity	1	53	(0)	1831351
16	20.9	2.3	0.0	chr19	15200242	15200285	(43417331)	+	(GGCTCC)n	Simple_repeat	1	45	(0)	1831352
15	15.9	2.9	0.0	chr19	15233135	15233169	(43384447)	+	(GGTGG)n	Simple_repeat	1	36	(0)	1831445
16	30.9	1.4	1.4	chr19	15380240	15380308	(43237308)	+	(GGC)n	Simple_repeat	1	70	(0)	1831698
17	14.2	0.0	0.0	chr19	15380373	15380403	(43237213)	+	(CCT)n	Simple_repeat	1	31	(0)	1831699
1299	30.4	4.5	2.1	chr19	16062626	16063062	(42554554)	+	LTR16C	LTR/ERVL	3	450	(39)	1833033
13	25.8	2.2	0.0	chr19	16076660	16076705	(42540911)	+	(AGCGCG)n	Simple_repeat	1	47	(0)	1833071
12	11.6	4.7	6.7	chr19	16111699	16111741	(42505875)	+	(GCGCTCC)n	Simple_repeat	1	45	(0)	1833149
13	22.7	0.0	9.0	chr19	16325165	16325231	(42292385)	+	(CGCCGCC)n	Simple_repeat	1	67	(0)	1833723
22	13.1	2.4	0.0	chr19	16325311	16325352	(42292264)	+	(CGC)n	Simple_repeat	1	43	(0)	1833724
13	12.5	0.0	3.6	chr19	16325522	16325549	(42292067)	+	(GCG)n	Simple_repeat	1	28	(0)	1833725
487	15.8	0.9	5.2	chr19	16776964	16778059	(41839557)	+	GA-rich	Low_complexity	1	1106	(0)	1834744
29	11.5	1.7	3.3	chr19	17245941	17246000	(41371616)	+	G-rich	Low_complexity	1	61	(0)	1835832
15	17.8	3.0	7.3	chr19	17246042	17246107	(41371509)	+	G-rich	Low_complexity	1	68	(0)	1835832
18	16.4	0.0	7.3	chr19	17246112	17246166	(41371450)	+	(CCCTCC)n	Simple_repeat	1	55	(0)	1835833
12	20.5	2.0	5.9	chr19	17334383	17334432	(41283184)	+	(CCCCAG)n	Simple_repeat	1	51	(0)	1836049
193	10.3	0.0	0.0	chr19	17335054	17335082	(41282534)	+	MIRc	SINE/MIR	115	143	(125)	1836050
28	0.0	0.0	0.0	chr19	17425433	17425458	(41192158)	+	(TTG)n	Simple_repeat	1	26	(0)	1836304
2213	8.8	0.7	0.7	chr19	17425461	17425754	(41191862)	C	AluSx1	SINE/Alu	(17)	295	2	1836305
2511	8.1	0.0	0.0	chr19	17662639	17662948	(40954668)	+	AluY	SINE/Alu	1	310	(1)	1836943
15	11.4	10.2	1.9	chr19	17663005	17663053	(40954563)	+	(AGGTGTG)n	Simple_repeat	1	54	(0)	1836944
23	20.1	5.9	0.0	chr19	17719682	17719749	(40897867)	+	(CGG)n	Simple_repeat	1	72	(0)	1837104
695	29.0	9.6	1.5	chr19	17778935	17779662	(40837954)	C	L2a	LINE/L2	(23)	3403	2474	1837257
26	13.4	0.0	2.0	chr19	17947791	17947841	(40669775)	+	(CGGCCC)n	Simple_repeat	1	51	(0)	1837697
22	12.9	0.0	2.3	chr19	17948097	17948140	(40669476)	+	(CCCCACC)n	Simple_repeat	1	44	(0)	1837698
447	11.7	3.1	6.0	chr19	17948847	17948946	(40668670)	+	MER53	DNA/hAT	1	97	(96)	1837699
2002	8.0	4.3	1.5	chr19	18057886	18058159	(40559457)	+	AluSq2	SINE/Alu	14	295	(18)	1837970
2029	11.5	1.0	4.9	chr19	18113294	18113461	(40504155)	C	AluSx	SINE/Alu	(19)	293	135	1838140
20	7.2	0.0	0.0	chr19	18282216	18282245	(40335371)	+	(CCCT)n	Simple_repeat	1	30	(0)	1838530
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
12	23.3	0.0	0.0	chr19	18292355	18292389	(40325227)	+	G-rich	Low_complexity	1	35	(0)	1838555
238	22.4	5.6	1.5	chr19	18292597	18292664	(40324952)	+	MIR3	SINE/MIR	85	155	(53)	1838556
2297	8.6	2.9	0.0	chr19	18416014	18416314	(40201302)	C	AluSx1	SINE/Alu	(2)	310	1	1838864
881	18.0	0.6	1.9	chr19	18416317	18416477	(40201139)	C	AluJb	SINE/Alu	(17)	295	137	1838865
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
273	26.8	19.3	3.4	chr19	18611392	18611538	(40006078)	+	MIR	SINE/MIR	1	176	(86)	1839220
22	8.6	0.0	2.6	chr19	18611652	18611690	(40005926)	+	(GGGAG)n	Simple_repeat	1	39	(0)	1839221
32	3.0	0.0	0.0	chr19	18683656	18683689	(39933927)	+	(GAG)n	Simple_repeat	1	34	(0)	1839368
30	20.6	1.0	5.9	chr19	18683858	18683957	(39933659)	+	G-rich	Low_complexity	1	101	(0)	1839369
21	26.4	2.8	0.0	chr19	19618578	19618649	(38998967)	+	G-rich	Low_complexity	1	74	(0)	1841312
16506	21.8	3.2	3.6	chr19	19944290	19949667	(38667949)	+	HERVFH21-int	LTR/ERV1	1	5348	(1181)	1841863
12	14.1	3.0	2.9	chr19	29526161	29526193	(29091423)	+	(AGCAGA)n	Simple_repeat	1	34	(0)	1850367
15	12.9	2.8	2.7	chr19	29526235	29526270	(29091346)	+	(CCCGG)n	Simple_repeat	1	37	(0)	1850368
13	31.8	0.0	1.8	chr19	29526522	29526578	(29091038)	+	(GCCCCC)n	Simple_repeat	1	57	(0)	1850369
13	27.4	8.4	0.0	chr19	30226091	30226173	(28391443)	+	(CCCGGCG)n	Simple_repeat	1	90	(0)	1851575
15	8.5	0.0	0.0	chr19	30282815	30282839	(28334777)	+	(AGAC)n	Simple_repeat	1	25	(0)	1851654
39	18.5	1.0	4.0	chr19	31349425	31349523	(27268093)	+	GA-rich	Low_complexity	1	100	(0)	1853081
13	21.4	3.9	3.7	chr19	32405916	32405967	(26211649)	+	(GGCG)n	Simple_repeat	1	54	(0)	1854737
132	29.9	3.0	4.3	chr19	32720117	32720840	(25896776)	+	(CCCACC)n	Simple_repeat	1	746	(0)	1855371
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
17	20.2	6.9	2.6	chr19	33796244	33796315	(24821301)	+	(GGCGCCG)n	Simple_repeat	1	77	(0)	1857331
31	20.7	5.2	5.0	chr19	33796639	33796772	(24820844)	+	GA-rich	Low_complexity	1	141	(0)	1857332
12	23.8	2.2	2.1	chr19	34134452	34134497	(24483119)	+	G-rich	Low_complexity	1	47	(0)	1857971
825	13.7	0.0	0.8	chr19	34404033	34404156	(24213460)	+	FLAM_C	SINE/Alu	11	133	(10)	1858560
423	20.0	0.0	0.0	chr19	34404168	34404242	(24213374)	C	L1MC5a	LINE/L1	(635)	2142	2068	1858561
19759	18.3	1.9	0.6	chr19	34555849	34559131	(24058485)	C	HERVS71-int	LTR/ERV1	(4259)	4719	1393	1858839
6685	18.0	7.7	3.4	chr19	34559520	34560828	(24056788)	C	HERVS71-int	LTR/ERV1	(7605)	1373	4	1858839
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
196	12.1	0.0	0.0	chr19	34746749	34746781	(23870835)	+	L2c	LINE/L2	3039	3071	(316)	1859071
2157	17.0	11.4	4.2	chr19	34746855	34747356	(23870260)	C	MER67A	LTR/ERV1	(0)	543	1	1859072
1231	26.2	10.3	1.4	chr19	34938681	34939113	(23678503)	+	LTR87	LTR/ERVL?	1	476	(148)	1859371
54	1.6	4.7	0.0	chr19	34939122	34939185	(23678431)	+	(CTCCC)n	Simple_repeat	1	67	(0)	1859372
2228	9.4	0.7	0.0	chr19	34939192	34939477	(23678139)	C	AluSg	SINE/Alu	(22)	288	1	1859373
17	29.1	3.1	1.5	chr19	35000120	35000184	(23617432)	+	(TC)n	Simple_repeat	1	67	(0)	1859480
14	11.7	0.0	3.3	chr19	35000393	35000417	(23617199)	+	(GCCCA)n	Simple_repeat	1	25	(0)	1859481
29	3.2	0.0	0.0	chr19	35000418	35000449	(23617167)	+	(GCCCT)n	Simple_repeat	1	32	(0)	1859482
15	4.0	3.6	3.5	chr19	35030408	35030435	(23587181)	+	(CCCT)n	Simple_repeat	1	29	(0)	1859551
31	0.0	0.0	0.0	chr19	35030438	35030466	(23587150)	+	(GCC)n	Simple_repeat	1	29	(0)	1859552
38	6.5	0.0	0.0	chr19	35135680	35135727	(23481889)	+	(ATG)n	Simple_repeat	1	48	(0)	1859792
2355	15.9	10.9	0.5	chr19	35438560	35439002	(23178614)	+	LTR42	LTR/ERVL	1	495	(0)	1860412
31	10.7	0.0	0.0	chr19	35900798	35900849	(22716767)	+	(T)n	Simple_repeat	1	52	(0)	1861405
1996	11.0	3.8	0.0	chr19	35900851	35901131	(22716485)	C	AluSx1	SINE/Alu	(19)	293	2	1861406
838	26.6	12.5	0.7	chr19	36128478	36128765	(22488851)	+	LTR10B	LTR/ERV1	179	505	(0)	1861928
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
2031	14.6	0.0	0.0	chr19	36379389	36379690	(22237926)	C	AluJo	SINE/Alu	(10)	302	1	1862427
1269	29.8	7.2	5.2	chr19	36908749	36909527	(21708089)	+	HAL1	LINE/L1	1403	2178	(329)	1863497
1309	24.5	9.2	0.4	chr19	36913876	36914493	(21703123)	+	L1MEg	LINE/L1	4757	5433	(740)	1863507
2448	24.4	9.0	5.6	chr19	37353173	37354218	(21263398)	C	L1ME3D	LINE/L1	(240)	2339	1240	1864283
59	3.3	0.0	0.0	chr19	37354223	37354284	(21263332)	+	(CCCCT)n	Simple_repeat	1	62	(0)	1864292
499	27.9	4.2	1.7	chr19	37354303	37354495	(21263121)	C	L1ME3D	LINE/L1	(5855)	281	20	1864283
2410	7.1	0.0	3.5	chr19	37468494	37468804	(21148812)	C	AluSx3	SINE/Alu	(10)	301	2	1864483
1821	28.5	16.9	1.3	chr19	37582179	37583225	(21034391)	+	L2b	LINE/L2	1917	3167	(208)	1864696
2179	15.8	6.1	4.9	chr19	37780040	37780547	(20837069)	C	L1MA7	LINE/L1	(5)	6286	5812	1865094
23	24.0	0.0	0.0	chr19	38211687	38211736	(20405880)	+	(T)n	Simple_repeat	1	50	(0)	1866117
15	4.8	0.0	0.0	chr19	38211849	38211870	(20405746)	+	(AGGG)n	Simple_repeat	1	22	(0)	1866118
2449	7.4	0.0	0.0	chr19	38235671	38235968	(20381648)	+	AluSc	SINE/Alu	1	298	(11)	1866177
43	4.3	0.0	0.0	chr19	38235969	38236017	(20381599)	+	(AAGGG)n	Simple_repeat	1	49	(0)	1866178
1997	16.7	0.0	0.0	chr19	38236212	38236510	(20381106)	+	AluSz	SINE/Alu	14	312	(0)	1866179
14	10.2	0.0	8.1	chr19	38434673	38434709	(20182907)	+	G-rich	Low_complexity	1	37	(0)	1866653
341	31.8	3.2	7.2	chr19	38435076	38435268	(20182348)	C	MIRb	SINE/MIR	(9)	259	75	1866654
1806	8.4	4.0	4.4	chr19	38950611	38950795	(19666821)	+	MER87B	LTR/ERV1	6	181	(328)	1867816
1965	13.1	0.0	4.5	chr19	39224308	39224619	(19392997)	C	AluJo	SINE/Alu	(14)	298	1	1868585
239	31.4	0.0	0.0	chr19	39224624	39224674	(19392942)	+	MLT1I	LTR/ERVL-MaLR	144	194	(217)	1868586
12	18.7	0.0	3.0	chr19	39224751	39224783	(19392833)	+	A-rich	Low_complexity	1	33	(0)	1868587
11	14.8	4.9	4.7	chr19	39320618	39320658	(19296958)	+	G-rich	Low_complexity	1	43	(0)	1868832
22	25.6	4.1	2.9	chr19	39320668	39320765	(19296851)	+	(CGCA)n	Simple_repeat	1	102	(0)	1868833
21	23.4	4.3	4.2	chr19	39320881	39320972	(19296644)	+	(GCC)n	Simple_repeat	1	96	(0)	1868834
248	36.5	14.1	1.6	chr19	39340884	39341633	(19275983)	+	L2	LINE/L2	2092	2950	(469)	1868894
13	22.5	2.0	3.9	chr19	39834170	39834219	(18783397)	+	(CCTCC)n	Simple_repeat	1	51	(0)	1869713
2937	12.7	17.9	5.1	chr19	39858477	39859024	(18758592)	C	MER51A	LTR/ERV1	(1)	633	1	1869767
1759	24.8	4.2	8.4	chr19	39859025	39859116	(18758500)	C	L1MC5a	LINE/L1	(2342)	435	353	1869762
2200	9.0	0.7	0.0	chr19	39859117	39859395	(18758221)	+	AluSz	SINE/Alu	15	295	(17)	1869768
12	17.5	3.1	0.0	chr19	39885953	39885984	(18731632)	+	(CTCTCC)n	Simple_repeat	1	33	(0)	1869830
12	17.5	3.1	0.0	chr19	39902205	39902236	(18715380)	+	(CTCTCC)n	Simple_repeat	1	33	(0)	1869864
24	10.9	0.0	0.0	chr19	40285268	40285307	(18332309)	+	(CGGCAG)n	Simple_repeat	1	40	(0)	1870651
897	6.2	0.8	9.7	chr19	40403960	40404103	(18213513)	C	AluJo	SINE/Alu	(181)	131	1	1870961
492	25.5	20.9	0.5	chr19	40433498	40433706	(18183910)	C	L2a	LINE/L2	(338)	3081	2819	1871042
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
13	9.8	9.1	0.0	chr19	40444351	40444383	(18173233)	+	(AGCCGCG)n	Simple_repeat	1	36	(0)	1871078
22	29.3	0.0	2.4	chr19	40530404	40530427	(18087189)	+	(GGCG)n	Simple_repeat	1	78	(0)	1871327
19	26.9	1.9	0.0	chr19	40530428	40530481	(18087135)	+	(GC)n	Simple_repeat	1	55	(0)	1871328
18	27.7	1.1	5.4	chr19	40690743	40690833	(17926783)	+	(CCCGC)n	Simple_repeat	1	92	(0)	1871711
16	25.4	6.6	1.2	chr19	40717230	40717305	(17900311)	+	(GGC)n	Simple_repeat	1	81	(0)	1871779
17	26.1	1.6	1.6	chr19	40799071	40799131	(17818485)	+	(CCCCG)n	Simple_repeat	1	62	(0)	1871992
17	9.4	5.9	0.0	chr19	41114194	41114227	(17503389)	+	A-rich	Low_complexity	1	36	(0)	1872610
482	28.1	6.2	0.6	chr19	41161839	41161996	(17455620)	+	MIRb	SINE/MIR	33	200	(68)	1872750
46	2.3	0.0	0.0	chr19	41700039	41700082	(16917534)	+	(CA)n	Simple_repeat	1	44	(0)	1873771
382	28.9	9.6	6.6	chr19	41706945	41707365	(16910251)	+	L2a	LINE/L2	2940	3419	(7)	1873776
17	26.7	2.8	6.4	chr19	41935575	41935614	(16682002)	+	(GACA)n	Simple_repeat	1	105	(0)	1874210
18	31.6	1.6	0.0	chr19	41935615	41935676	(16681940)	+	GA-rich	Low_complexity	1	63	(0)	1874211
17	9.4	5.9	5.6	chr19	42076164	42076214	(16541402)	+	(GCGAGA)n	Simple_repeat	1	54	(0)	1874520
30	22.1	0.0	3.6	chr19	42177009	42177092	(16440524)	+	(GCGG)n	Simple_repeat	1	84	(0)	1874738
17	6.5	2.8	5.4	chr19	42177108	42177143	(16440473)	+	(GCCC)n	Simple_repeat	1	37	(0)	1874739
28	3.3	0.0	0.0	chr19	42177252	42177282	(16440334)	+	(CCCGCT)n	Simple_repeat	1	31	(0)	1874740
18	19.6	0.0	8.6	chr19	42179491	42179560	(16438056)	+	G-rich	Low_complexity	1	70	(0)	1874744
178	19.6	0.6	1.1	chr19	42194822	42195184	(16422432)	+	G-rich	Low_complexity	1	365	(0)	1874779
70	18.6	2.2	3.7	chr19	42195289	42195322	(16422294)	+	(TTCC)n	Simple_repeat	1	32	(0)	1874780
2479	8.4	0.0	0.0	chr19	42195323	42195631	(16421985)	C	AluY	SINE/Alu	(2)	309	1	1874781
15	13.6	0.0	2.9	chr19	42253917	42253950	(16363666)	+	(CCCCGC)n	Simple_repeat	1	34	(0)	1874888
12	18.7	2.1	6.1	chr19	42254041	42254088	(16363528)	+	G-rich	Low_complexity	1	49	(0)	1874889
12	28.5	4.6	1.5	chr19	42280618	42280682	(16336934)	+	(GCCG)n	Simple_repeat	1	68	(0)	1874952
662	8.0	2.6	0.0	chr19	42362620	42363021	(16254595)	C	MSR1	Satellite	(11)	412	1	1875113
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
2336	10.4	0.0	0.0	chr19	42650622	42650918	(15966698)	+	AluSx1	SINE/Alu	2	298	(14)	1875636
1115	23.8	5.2	12.9	chr19	42650919	42651240	(15966376)	+	MLT1A	LTR/ERVL-MaLR	70	362	(12)	1875635
12	20.1	7.5	1.8	chr19	43527303	43527355	(15090261)	+	G-rich	Low_complexity	1	57	(0)	1877018
13	16.5	0.0	8.3	chr19	43639541	43639588	(14978028)	+	(GCCCCC)n	Simple_repeat	1	48	(0)	1877297
738	21.0	0.0	0.6	chr19	43810178	43810335	(14807281)	C	L1M4	LINE/L1	(1923)	4223	4067	1877738
981	19.4	0.0	0.0	chr19	43810348	43810507	(14807109)	C	AluJb	SINE/Alu	(23)	289	130	1877739
16	15.2	0.0	4.9	chr19	43810516	43810533	(14807083)	+	(CTTCC)n	Simple_repeat	1	17	(0)	1877740
55	4.9	0.0	0.0	chr19	43810534	43810597	(14807019)	+	(CCCTCCCCTC)n	Simple_repeat	1	64	(0)	1877741
16	15.2	0.0	4.9	chr19	43810598	43810619	(14806997)	+	(CTTCC)n	Simple_repeat	3	24	(0)	1877742
2274	9.5	1.9	0.7	chr19	43810626	43810929	(14806687)	C	AluSx1	SINE/Alu	(4)	308	1	1877743
12	28.7	0.0	2.1	chr19	43827533	43827580	(14790036)	+	G-rich	Low_complexity	1	48	(0)	1877783
725	28.9	6.9	2.4	chr19	44140935	44141225	(14476391)	+	L2	LINE/L2	468	772	(2647)	1878265
191	32.2	9.4	0.0	chr19	44500820	44500934	(14116682)	C	MIRb	SINE/MIR	(12)	256	130	1878829
12	23.6	7.6	1.4	chr19	44844643	44844708	(13772908)	+	(CCCGCCT)n	Simple_repeat	1	71	(0)	1879783
14	18.3	2.7	0.0	chr19	44844880	44844916	(13772700)	+	(AGCCC)n	Simple_repeat	1	38	(0)	1879784
14	26.0	1.9	1.9	chr19	44844984	44845035	(13772581)	+	G-rich	Low_complexity	1	53	(0)	1879785
626	28.5	8.3	1.0	chr19	44904654	44904855	(13712761)	C	MIR	SINE/MIR	(29)	233	16	1879932
204	29.9	16.1	1.9	chr19	44904885	44905045	(13712571)	C	MIRb	SINE/MIR	(79)	189	5	1879933
2377	7.7	1.6	0.0	chr19	44905087	44905384	(13712232)	C	AluSq	SINE/Alu	(10)	303	1	1879934
12	19.6	2.9	0.0	chr19	45251417	45251451	(13366165)	+	(CCCTCC)n	Simple_repeat	1	36	(0)	1880813
12	12.2	3.7	0.0	chr19	45251505	45251531	(13366085)	+	GA-rich	Low_complexity	1	28	(0)	1880814
16	23.5	0.0	0.0	chr19	45251540	45251574	(13366042)	+	(C)n	Simple_repeat	1	35	(0)	1880815
3869	5.9	1.9	3.5	chr19	45578001	45578544	(13039072)	+	LTR8	LTR/ERV1	1	535	(156)	1881691
2289	10.4	0.7	0.0	chr19	45578546	45578852	(13038764)	+	AluSp	SINE/Alu	1	309	(4)	1881692
2364	8.4	0.0	0.3	chr19	45670033	45670329	(12947287)	C	AluSz	SINE/Alu	(14)	298	3	1881957
18	26.5	1.4	2.8	chr19	45792549	45792619	(12824997)	+	(CGGAGG)n	Simple_repeat	1	72	(0)	1882258
924	30.4	4.8	5.4	chr19	45862394	45862941	(12754675)	C	L2b	LINE/L2	(1)	3374	2823	1882441
16	0.0	0.0	0.0	chr19	45863114	45863133	(12754483)	+	(CCG)n	Simple_repeat	1	20	(0)	1882442
12	9.7	0.0	0.0	chr19	45864341	45864362	(12753254)	+	(CGGG)n	Simple_repeat	1	22	(0)	1882444
408	31.6	3.6	5.1	chr19	46416290	46416337	(12201279)	+	L2a	LINE/L2	2852	2898	(521)	1883602
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
24	20.0	0.0	0.0	chr19	46416949	46416994	(12200622)	+	(T)n	Simple_repeat	1	46	(0)	1883606
1832	14.3	1.8	0.4	chr19	46785105	46785383	(11832233)	+	AluJb	SINE/Alu	6	288	(24)	1884536
2374	7.8	2.6	0.0	chr19	46849011	46849304	(11768312)	C	AluSx1	SINE/Alu	(10)	302	1	1884738
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
15	12.0	0.0	3.3	chr19	47112359	47112388	(11505228)	+	(CCT)n	Simple_repeat	1	30	(0)	1885279
29	30.4	2.4	1.6	chr19	47112440	47112563	(11505053)	+	(GGC)n	Simple_repeat	1	127	(0)	1885280
17	18.7	3.3	4.8	chr19	47113141	47113200	(11504416)	+	(GAGGCG)n	Simple_repeat	1	62	(0)	1885281
12	21.8	2.7	0.0	chr19	47113254	47113290	(11504326)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	1885281
44	2.4	0.0	0.0	chr19	47241347	47241388	(11376228)	+	(CA)n	Simple_repeat	1	42	(0)	1885627
20	23.6	2.9	4.2	chr19	47241456	47241525	(11376091)	+	(TG)n	Simple_repeat	1	72	(0)	1885628
18	31.4	0.0	2.6	chr19	47274311	47274388	(11343228)	+	G-rich	Low_complexity	1	78	(0)	1885716
1568	16.5	6.9	0.7	chr19	47446431	47446702	(11170914)	C	AluJo	SINE/Alu	(14)	298	9	1886179
36	28.8	5.8	0.6	chr19	47471853	47472024	(11145592)	+	GA-rich	Low_complexity	1	182	(0)	1886246
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
15	14.4	2.4	4.7	chr19	47608664	47608705	(11008911)	+	G-rich	Low_complexity	1	43	(0)	1886567
17	11.6	0.0	7.0	chr19	47778598	47778640	(10838976)	+	(CCTCCGC)n	Simple_repeat	1	43	(0)	1887045
536	16.1	1.0	0.2	chr19	47790261	47790358	(10827258)	C	FLAM_C	SINE/Alu	(9)	124	26	1887070
1960	15.9	0.7	0.7	chr19	47790743	47791051	(10826565)	+	AluJb	SINE/Alu	3	311	(1)	1887071
4019	16.7	0.1	3.3	chr19	48092349	48092949	(10524667)	+	L1MB3	LINE/L1	5599	6183	(0)	1887919
2301	8.8	0.3	0.3	chr19	48255086	48255379	(10362237)	+	AluSc	SINE/Alu	1	294	(15)	1888296
2155	15.2	6.5	3.7	chr19	48255380	48255425	(10362191)	+	MER65A	LTR/ERV1	407	445	(0)	1888295
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
785	25.5	10.9	2.0	chr19	48351326	48351849	(10265767)	+	L2a	LINE/L2	2629	3222	(204)	1888537
1847	17.2	2.3	8.4	chr19	48351866	48351966	(10265650)	C	MER2	DNA/TcMar-Tigger	(0)	345	251	1888539
2486	6.8	0.0	0.0	chr19	48351967	48352262	(10265354)	+	AluY	SINE/Alu	2	297	(14)	1888540
15	28.6	2.3	4.5	chr19	48391489	48391575	(10226041)	+	G-rich	Low_complexity	1	89	(0)	1888647
207	26.3	5.0	0.0	chr19	48637311	48637367	(9980249)	+	X9_LINE	LINE/L1	584	643	(293)	1889253
14	10.7	3.1	3.0	chr19	48637382	48637413	(9980203)	+	GA-rich	Low_complexity	1	33	(0)	1889254
18	11.7	8.0	3.7	chr19	48645813	48645862	(9971754)	+	(CT)n	Simple_repeat	1	54	(0)	1889271
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
14	21.7	0.0	10.3	chr19	48646681	48646758	(9970858)	+	(GGAGCG)n	Simple_repeat	1	78	(0)	1889273
14	16.9	2.3	4.4	chr19	48714440	48714483	(9903133)	+	(CGCGG)n	Simple_repeat	1	45	(0)	1889450
13	18.7	0.0	5.0	chr19	48714563	48714602	(9903014)	+	G-rich	Low_complexity	1	40	(0)	1889451
294	27.5	0.0	3.8	chr19	48714643	48714748	(9902868)	C	MSR1	Satellite	(7)	104	3	1889452
14	18.9	4.5	2.2	chr19	48993563	48993606	(9624010)	+	GA-rich	Low_complexity	1	46	(0)	1890139
821	18.8	5.3	0.0	chr19	49386550	49386693	(9230923)	+	AluJr	SINE/Alu	140	291	(21)	1891009
166	15.2	2.1	4.2	chr19	49386699	49387075	(9230541)	+	G-rich	Low_complexity	1	385	(0)	1891010
1536	17.9	8.9	1.5	chr19	49387078	49387141	(9230475)	+	L1MEg	LINE/L1	4350	4430	(2807)	1890996
679	13.5	5.6	5.6	chr19	49387142	49387267	(9230349)	+	AluJo	SINE/Alu	5	130	(182)	1891011
1536	17.9	8.9	1.5	chr19	49387268	49387605	(9230011)	+	L1MEg	LINE/L1	4431	4784	(2453)	1890996
124	15.4	5.9	2.1	chr19	49444058	49444364	(9173252)	+	(CTTC)n	Simple_repeat	1	325	(0)	1891102
950	21.1	0.5	1.9	chr19	49532976	49533183	(9084433)	C	MIR	SINE/MIR	(44)	218	14	1891316
17	0.0	0.0	0.0	chr19	49591092	49591110	(9026506)	+	(T)n	Simple_repeat	1	19	(0)	1891487
19	20.3	0.0	0.0	chr19	49591155	49591199	(9026417)	+	(CCCCGCC)n	Simple_repeat	1	45	(0)	1891488
16	11.7	0.0	0.0	chr19	49591232	49591259	(9026357)	+	(GGC)n	Simple_repeat	1	28	(0)	1891489
16	20.2	0.0	4.1	chr19	49591443	49591491	(9026125)	+	(CCCCCTC)n	Simple_repeat	1	49	(0)	1891490
19	3.2	6.2	0.0	chr19	49591600	49591633	(9025983)	+	(CCCT)n	Simple_repeat	1	36	(0)	1891491
29	0.0	0.0	0.0	chr19	49591791	49591818	(9025798)	+	(GCCGG)n	Simple_repeat	1	28	(0)	1891492
332	22.1	2.8	4.8	chr19	49640837	49640967	(8976649)	C	MSR1	Satellite	(0)	128	1	1891595
2384	8.7	0.0	0.3	chr19	49712061	49712359	(8905257)	+	AluSx1	SINE/Alu	1	298	(14)	1891746
2596	4.7	0.0	0.0	chr19	49765115	49765413	(8852203)	+	AluY	SINE/Alu	1	299	(12)	1891887
2449	7.7	0.0	0.3	chr19	49817642	49817951	(8799665)	+	AluSx1	SINE/Alu	1	309	(3)	1892010
559	29.0	5.1	2.2	chr19	49863080	49863427	(8754189)	+	L2a	LINE/L2	2948	3315	(60)	1892087
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
15	26.2	3.9	3.7	chr19	50289996	50290073	(8327543)	+	(CATC)n	Simple_repeat	1	81	(0)	1893199
2407	9.5	0.0	0.0	chr19	50296979	50297283	(8320333)	C	AluSg	SINE/Alu	(5)	305	1	1893216
1800	21.4	8.2	6.4	chr19	50297284	50297489	(8320127)	C	MLT1C	LTR/ERVL-MaLR	(59)	408	179	1893215
2305	9.3	0.7	1.3	chr19	50297490	50297799	(8319817)	C	AluSq2	SINE/Alu	(5)	308	1	1893217
15	5.5	0.0	0.0	chr19	50417672	50417690	(8199926)	+	(C)n	Simple_repeat	1	19	(0)	1893468
13	18.3	2.6	2.5	chr19	50417790	50417828	(8199788)	+	G-rich	Low_complexity	1	40	(0)	1893469
1695	13.4	4.4	3.4	chr19	50431174	50431464	(8186152)	+	AluJr	SINE/Alu	6	299	(13)	1893496
17	16.1	3.9	3.7	chr19	50556247	50556298	(8061318)	+	G-rich	Low_complexity	1	54	(0)	1893779
189	35.2	7.8	3.6	chr19	50556523	50556743	(8060873)	+	L2a	LINE/L2	3194	3424	(2)	1893780
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
14	7.2	6.9	0.0	chr19	51689179	51689207	(6928409)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	1896049
14	27.5	6.2	1.2	chr19	51689230	51689309	(6928307)	+	G-rich	Low_complexity	1	85	(0)	1896050
263	19.0	2.0	9.1	chr19	51689584	51689693	(6927923)	C	MSR1	Satellite	(2)	109	8	1896051
542	19.1	1.8	0.9	chr19	52271086	52271196	(6346420)	C	MER21B	LTR/ERVL	(315)	553	442	1897147
792	20.3	4.0	1.8	chr19	52271191	52271406	(6346210)	+	MER21C	LTR/ERVL	570	885	(53)	1897148
21	13.5	0.0	0.0	chr19	52941817	52941849	(5675767)	+	(T)n	Simple_repeat	1	33	(0)	1898515
20	35.1	3.9	1.5	chr19	53978791	53978917	(4638699)	+	GA-rich	Low_complexity	1	132	(0)	1900729
19	13.1	5.6	3.5	chr19	53978865	53978918	(4638698)	+	G-rich	Low_complexity	1	57	(0)	1900730
256	18.4	4.5	1.6	chr19	54133722	54134358	(4483258)	+	(TCCC)n	Simple_repeat	1	666	(0)	1901162
2154	10.8	1.0	2.9	chr19	54448652	54448966	(4168650)	+	AluSg	SINE/Alu	1	309	(1)	1901778
22	18.6	6.5	2.4	chr19	55067145	55067221	(3550395)	+	GA-rich	Low_complexity	1	82	(0)	1902929
397	35.8	4.0	4.0	chr19	55067406	55067751	(3549865)	C	L2	LINE/L2	(339)	3080	2735	1902930
662	9.0	1.3	1.1	chr19	55147654	55147973	(3469643)	C	MSR1	Satellite	(0)	320	1	1903105
202	35.6	6.5	0.0	chr19	55408694	55408794	(3208822)	+	MIRc	SINE/MIR	57	164	(104)	1903670
198	31.6	8.7	0.0	chr19	55504085	55504179	(3113437)	C	MIRb	SINE/MIR	(95)	173	70	1903859
216	29.3	1.7	0.0	chr19	55504436	55504493	(3113123)	+	MIRc	SINE/MIR	83	141	(127)	1903860
299	25.2	0.0	2.7	chr19	55580354	55580463	(3037153)	C	MSR1	Satellite	(4)	107	1	1904072
16	12.7	0.0	5.3	chr19	55580750	55580787	(3036829)	+	G-rich	Low_complexity	1	38	(0)	1904073
12	19.3	0.0	5.1	chr19	55600208	55600246	(3017370)	+	(GCGG)n	Simple_repeat	1	39	(0)	1904120
19	11.3	2.5	2.4	chr19	55600272	55600311	(3017305)	+	(GCC)n	Simple_repeat	1	41	(0)	1904121
14	25.6	1.9	1.9	chr19	55600414	55600466	(3017150)	+	G-rich	Low_complexity	1	54	(0)	1904122
15	17.7	5.0	2.4	chr19	55600511	55600550	(3017066)	+	(CG)n	Simple_repeat	1	42	(0)	1904123
21	13.8	0.0	7.3	chr19	55605591	55605645	(3011971)	+	G-rich	Low_complexity	1	55	(0)	1904131
14	12.7	0.0	0.0	chr19	55605687	55605712	(3011904)	+	(CCT)n	Simple_repeat	1	26	(0)	1904132
105	23.5	4.4	1.9	chr19	55712699	55712979	(2904637)	+	GA-rich	Low_complexity	1	287	(0)	1904341
488	33.9	7.3	0.4	chr19	55713016	55713293	(2904323)	+	L2a	LINE/L2	2959	3257	(169)	1904342
2075	10.4	0.0	1.0	chr19	55838959	55839269	(2778347)	C	L1PA8	LINE/L1	(0)	6172	5865	1904563
233	29.8	3.4	1.7	chr19	56140453	56140568	(2477048)	C	MIRc	SINE/MIR	(91)	177	60	1905198
14	5.0	0.0	0.0	chr19	56140757	56140777	(2476839)	+	(CTC)n	Simple_repeat	1	21	(0)	1905199
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
432	26.0	3.8	8.3	chr19	57269074	57269228	(1348388)	+	L2a	LINE/L2	2664	2820	(599)	1907529
2301	9.5	0.3	0.0	chr19	57269229	57269522	(1348094)	+	AluSc8	SINE/Alu	3	297	(14)	1907530
555	28.1	11.2	2.5	chr19	57435976	57436252	(1181364)	C	L2	LINE/L2	(666)	2753	2450	1907803
229	30.5	3.3	4.1	chr19	57578298	57578420	(1039196)	+	L2	LINE/L2	2761	2882	(537)	1908003
1548	16.1	7.0	5.4	chr19	57624309	57624831	(992785)	+	MER41G	LTR/ERV1	1	885	(0)	1908059
2226	9.8	0.3	0.3	chr19	57698805	57699091	(918525)	C	AluSg	SINE/Alu	(23)	287	1	1908183
2265	9.6	0.0	1.4	chr19	57699094	57699384	(918232)	C	AluSg	SINE/Alu	(22)	288	2	1908184
15	26.4	2.0	0.0	chr19	58097681	58097730	(519886)	+	(CTTCC)n	Simple_repeat	1	51	(0)	1908863
1989	8.0	0.7	8.9	chr19	58184282	58184595	(433021)	C	AluSx	SINE/Alu	(4)	308	21	1909057
3638	6.1	5.0	3.9	chr19	58277944	58278458	(339158)	+	MER41C	LTR/ERV1	1	521	(0)	1909251
13	21.7	4.7	6.7	chr19	58408437	58408521	(209095)	+	(CAACGCC)n	Simple_repeat	1	89	(0)	1909481
53	0.0	0.0	0.0	chr19	58453083	58453130	(164486)	+	(AAAT)n	Simple_repeat	1	48	(0)	1909554
15	20.0	0.0	0.0	chr19	58514358	58514386	(103230)	+	(C)n	Simple_repeat	1	29	(0)	1909660
20	0.0	0.0	0.0	chr2	287449	287470	(241906059)	+	(A)n	Simple_repeat	1	22	(0)	1911119
14	6.8	11.5	5.2	chr2	287932	287983	(241905546)	+	(GCGGAG)n	Simple_repeat	1	58	(0)	1911120
13	9.3	0.0	0.0	chr2	288132	288154	(241905375)	+	(CCCG)n	Simple_repeat	1	23	(0)	1911121
17	22.3	3.7	5.9	chr2	676986	677067	(241516462)	+	(GGCCC)n	Simple_repeat	1	85	(0)	1911465
18	18.8	3.3	4.8	chr2	920508	920567	(241272962)	+	(CTC)n	Simple_repeat	1	62	(0)	1911712
28	46.1	0.0	0.0	chr2	1743600	1743747	(240449782)	+	G-rich	Low_complexity	1	148	(0)	1912472
27	16.6	0.0	0.0	chr2	1987305	1987351	(240206178)	+	(T)n	Simple_repeat	1	47	(0)	1912729
3563	8.8	2.5	4.5	chr2	3514825	3515899	(238677630)	+	MER11A	LTR/ERVK	1	1266	(0)	1914564
679	20.3	1.5	2.2	chr2	3552717	3552854	(238640675)	+	FLAM_A	SINE/Alu	1	137	(5)	1914633
5843	16.6	4.7	0.7	chr2	3689062	3690277	(238503252)	C	L1M1	LINE/L1	(2826)	4736	3462	1914836
98	2.8	1.7	7.4	chr2	3690278	3690451	(238503078)	+	(CCCCT)n	Simple_repeat	1	164	(0)	1914838
4840	23.1	4.1	3.2	chr2	3690452	3691254	(238502275)	C	L1M1	LINE/L1	(4068)	3497	2716	1914836
12091	9.2	0.2	0.1	chr2	3907777	3909353	(238284176)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1915078
264	33.3	7.2	2.8	chr2	3929693	3929905	(238263624)	+	MamGypLTR1a	LTR/Gypsy	1	223	(561)	1915113
202	10.6	1.4	2.6	chr2	3929965	3930311	(238263218)	+	(CCCTT)n	Simple_repeat	1	352	(0)	1915114
253	28.9	8.6	3.0	chr2	6919428	6919591	(235273938)	C	L2	LINE/L2	(467)	2952	2779	1919194
2090	20.8	5.2	7.6	chr2	7127261	7127828	(235065701)	C	MLT2B3	LTR/ERVL	(0)	554	1	1919467
3178	13.8	6.4	2.4	chr2	8841187	8841771	(233351758)	C	MER4B	LTR/ERV1	(0)	610	1	1921953
14	11.1	0.0	6.1	chr2	9003628	9003660	(233189869)	+	(CGCC)n	Simple_repeat	1	33	(0)	1922157
12	14.9	3.3	0.0	chr2	9003744	9003773	(233189756)	+	(GGCCGG)n	Simple_repeat	1	31	(0)	1922158
29	25.3	0.0	8.1	chr2	9003769	9003904	(233189625)	+	(CCCCGC)n	Simple_repeat	1	136	(0)	1922159
27	3.1	0.0	2.9	chr2	9400264	9400298	(232793231)	+	(CTTC)n	Simple_repeat	1	35	(0)	1922878
2312	8.7	4.3	0.0	chr2	9537452	9537738	(232655791)	+	AluY	SINE/Alu	1	300	(11)	1923128
94	8.4	0.0	3.3	chr2	9537877	9538027	(232655502)	+	(GAGGG)n	Simple_repeat	1	151	(0)	1923129
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
16	20.5	0.0	0.0	chr2	10079921	10079959	(232113570)	+	G-rich	Low_complexity	1	39	(0)	1924129
220	22.9	1.6	1.6	chr2	10536735	10536796	(231656733)	C	MER5B	DNA/hAT-Charlie	(110)	68	7	1924932
16	26.0	0.8	4.6	chr2	10536995	10537062	(231656467)	+	A-rich	Low_complexity	1	65	(0)	1924933
27	5.4	2.6	0.0	chr2	11344312	11344350	(230849179)	+	(GGCCC)n	Simple_repeat	1	40	(0)	1926452
14	17.1	0.0	2.9	chr2	11344466	11344500	(230849029)	+	(GCCCC)n	Simple_repeat	1	35	(0)	1926453
1243	20.9	16.0	1.6	chr2	11403830	11404266	(230789263)	+	LTR33	LTR/ERVL	4	515	(0)	1926575
521	27.9	5.6	3.4	chr2	11404285	11404488	(230789041)	+	MIRc	SINE/MIR	55	266	(2)	1926576
5374	6.5	1.6	1.6	chr2	15679876	15681090	(226512439)	C	SVA_D	Retroposon/SVA	(339)	1047	1	1933107
89	4.8	3.0	1.5	chr2	15681091	15681222	(226512307)	+	(GGGGAG)n	Simple_repeat	1	136	(0)	1933108
199	24.5	19.1	0.9	chr2	15681250	15681360	(226512169)	+	L2c	LINE/L2	3243	3378	(9)	1933106
11	26.9	3.3	3.2	chr2	18560106	18560166	(223633363)	+	(CAGCCC)n	Simple_repeat	1	63	(0)	1937638
173	20.0	4.0	4.0	chr2	19690076	19690601	(222502928)	+	GA-rich	Low_complexity	1	547	(0)	1939161
25	20.3	1.5	2.9	chr2	20350704	20350770	(221842759)	+	(TCC)n	Simple_repeat	1	68	(0)	1940192
15	18.4	7.0	1.6	chr2	20666536	20666601	(221526928)	+	(CCTCCCCT)n	Simple_repeat	1	69	(0)	1940718
17	21.6	0.0	5.5	chr2	20834699	20834712	(221358817)	+	(CTTT)n	Simple_repeat	1	14	(0)	1940949
33	5.3	0.0	0.0	chr2	20834713	20834752	(221358777)	+	(CTCC)n	Simple_repeat	1	40	(0)	1940950
17	21.6	0.0	5.5	chr2	20834753	20834792	(221358737)	+	(CTTT)n	Simple_repeat	3	40	(0)	1940951
1977	16.8	0.0	0.3	chr2	23723011	23723302	(218470227)	+	AluJb	SINE/Alu	2	292	(20)	1944731
37	27.3	4.6	3.3	chr2	23723327	23723499	(218470030)	+	GA-rich	Low_complexity	1	181	(0)	1944732
4884	13.7	3.6	1.8	chr2	23723507	23724407	(218469122)	+	L1MA5A	LINE/L1	5963	6935	(4)	1944729
191	27.6	8.4	4.4	chr2	24490668	24490826	(217702703)	C	MIR3	SINE/MIR	(42)	166	1	1946256
19	22.1	0.0	0.0	chr2	24490925	24490971	(217702558)	+	G-rich	Low_complexity	1	47	(0)	1946257
38	21.6	4.0	6.1	chr2	24491129	24491302	(217702227)	+	(GCGGCG)n	Simple_repeat	1	181	(0)	1946258
14	27.2	1.4	5.4	chr2	25315134	25315206	(216878323)	+	(CCCTTC)n	Simple_repeat	1	74	(0)	1947710
14	23.1	2.1	2.1	chr2	25340887	25340933	(216852596)	+	(CCG)n	Simple_repeat	1	48	(0)	1947754
19	16.1	3.9	1.9	chr2	25341040	25341090	(216852439)	+	(CCCCG)n	Simple_repeat	1	53	(0)	1947755
16	19.7	2.1	2.0	chr2	25341189	25341236	(216852293)	+	G-rich	Low_complexity	1	49	(0)	1947756
16	29.4	0.0	0.0	chr2	25341259	25341312	(216852217)	+	(GCCCCC)n	Simple_repeat	1	54	(0)	1947757
19	19.5	3.2	3.1	chr2	25341527	25341588	(216851941)	+	G-rich	Low_complexity	1	64	(0)	1947758
47	28.8	0.0	2.0	chr2	25341916	25342067	(216851462)	+	(CCTC)n	Simple_repeat	1	152	(0)	1947759
293	25.0	12.0	1.1	chr2	25585176	25585361	(216608168)	C	L1ME4c	LINE/L1	(100)	730	522	1948184
23	16.2	2.0	0.0	chr2	26033766	26033814	(216159715)	+	G-rich	Low_complexity	1	50	(0)	1949188
922	29.6	9.9	5.4	chr2	26649816	26650841	(215542688)	C	L2b	LINE/L2	(0)	3375	2279	1950312
16	19.4	4.7	4.5	chr2	26786210	26786273	(215407256)	+	(GCCCGA)n	Simple_repeat	1	67	(0)	1950610
289	21.2	7.4	8.8	chr2	26786603	26786715	(215406814)	C	MIR	SINE/MIR	(66)	164	50	1950611
17	10.4	4.4	4.3	chr2	26971130	26971174	(215222355)	+	(CCTCCCT)n	Simple_repeat	1	47	(0)	1950981
13	30.5	3.3	0.0	chr2	27495207	27495266	(214698263)	+	(GGCCC)n	Simple_repeat	1	62	(0)	1951913
299	18.6	0.0	0.0	chr2	27715224	27715282	(214478247)	+	Charlie4z	DNA/hAT-Charlie	94	152	(15)	1952333
12	24.8	0.0	2.5	chr2	27715771	27715810	(214477719)	+	G-rich	Low_complexity	1	40	(0)	1952334
2156	12.6	1.0	0.7	chr2	28289508	28289816	(213903713)	+	AluSx	SINE/Alu	1	310	(2)	1953313
2254	23.3	7.6	4.0	chr2	28289817	28290577	(213902952)	C	L1ME3C	LINE/L1	(8)	6115	5378	1953312
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
2363	4.9	0.4	2.1	chr2	28893963	28894280	(213299249)	C	AluSg7	SINE/Alu	(0)	309	1	1954453
2265	6.5	2.3	3.6	chr2	28894281	28894422	(213299107)	C	AluSp	SINE/Alu	(173)	140	1	1954452
18	8.6	5.1	2.4	chr2	30147841	30147879	(212045650)	+	(GCC)n	Simple_repeat	1	41	(0)	1956448
6969	10.2	16.4	0.8	chr2	31783081	31784146	(210409383)	+	MER11A	LTR/ERVK	1	1266	(0)	1958880
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
21	24.4	1.4	2.8	chr2	32064106	32064176	(210129353)	+	(GCGCCG)n	Simple_repeat	1	72	(0)	1959449
937	20.6	14.8	13.7	chr2	32324707	32325078	(209868451)	+	L1MC4	LINE/L1	6671	7047	(995)	1960049
653	18.2	3.8	5.9	chr2	32325092	32325280	(209868249)	+	L1MC4	LINE/L1	7930	8041	(1)	1960050
201	17.1	0.0	2.4	chr2	32325281	32325322	(209868207)	+	MIR	SINE/MIR	197	237	(25)	1960046
25	16.0	5.5	2.6	chr2	32947058	32947130	(209246399)	+	(CCCGCTC)n	Simple_repeat	1	77	(0)	1961244
18	17.3	2.0	4.0	chr2	32947622	32947670	(209245859)	+	(CCG)n	Simple_repeat	1	50	(0)	1961245
2581	6.4	0.0	0.0	chr2	33551712	33551994	(208641535)	+	AluY	SINE/Alu	1	283	(28)	1962167
38	4.7	0.0	0.0	chr2	33551995	33552038	(208641491)	+	(AAAC)n	Simple_repeat	1	44	(0)	1962168
521	22.2	10.3	0.7	chr2	33552191	33552361	(208641168)	+	MIRc	SINE/MIR	2	193	(75)	1962169
5197	12.3	0.8	0.8	chr2	33610649	33611428	(208582101)	C	LTR17	LTR/ERV1	(0)	780	1	1962267
102	14.2	4.0	4.2	chr2	36344432	36344681	(205848848)	+	GA-rich	Low_complexity	1	260	(0)	1965944
15	18.5	5.9	1.9	chr2	36355764	36355818	(205837711)	+	(GGAGC)n	Simple_repeat	1	57	(0)	1965962
15	20.1	5.7	1.8	chr2	36355925	36355977	(205837552)	+	(CGC)n	Simple_repeat	1	56	(0)	1965963
19	0.0	3.9	0.0	chr2	36356042	36356067	(205837462)	+	(GGA)n	Simple_repeat	1	27	(0)	1965964
12	20.0	0.0	0.0	chr2	36356265	36356293	(205837236)	+	GA-rich	Low_complexity	1	29	(0)	1965965
531	33.6	8.8	5.0	chr2	36597200	36597537	(205595992)	+	L2c	LINE/L2	3036	3387	(0)	1966233
13	18.2	0.0	0.0	chr2	36598022	36598052	(205595477)	+	(CCGCCT)n	Simple_repeat	1	31	(0)	1966234
29	18.0	4.3	0.0	chr2	36598163	36598232	(205595297)	+	(CGCCC)n	Simple_repeat	1	73	(0)	1966235
22	14.3	2.1	2.0	chr2	36966336	36966383	(205227146)	+	(GCC)n	Simple_repeat	1	49	(0)	1966852
35	0.0	0.0	0.0	chr2	36966899	36966928	(205226601)	+	(AC)n	Simple_repeat	1	30	(0)	1966853
14	0.0	0.0	0.0	chr2	37324616	37324633	(204868896)	+	(GCG)n	Simple_repeat	1	18	(0)	1967537
13	17.8	5.3	0.0	chr2	37324772	37324809	(204868720)	+	(TCCC)n	Simple_repeat	1	40	(0)	1967538
649	24.1	2.5	5.0	chr2	37550442	37550642	(204642887)	C	MLT1J	LTR/ERVL-MaLR	(316)	196	1	1967899
1342	26.5	9.5	3.2	chr2	37550750	37551213	(204642316)	+	Kanga1a	DNA/TcMar-Tc2	1	496	(258)	1967900
11	25.7	0.0	7.8	chr2	37924965	37925028	(204268501)	+	G-rich	Low_complexity	1	64	(0)	1968476
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
17	6.8	6.5	0.0	chr2	38602153	38602183	(203591346)	+	(CGC)n	Simple_repeat	1	33	(0)	1969542
16	10.8	3.3	0.0	chr2	38602456	38602485	(203591044)	+	(GCC)n	Simple_repeat	1	31	(0)	1969543
499	35.6	12.5	2.6	chr2	38805403	38806206	(203387323)	C	L2	LINE/L2	(576)	2843	1949	1970015
346	28.4	0.0	3.1	chr2	38895124	38895221	(203298308)	C	MIR	SINE/MIR	(77)	185	91	1970205
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
15	11.6	4.9	4.7	chr2	39665928	39665968	(202527561)	+	(GGC)n	Simple_repeat	1	43	(0)	1971578
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
472	22.1	14.0	2.9	chr2	39779499	39779658	(202413871)	C	MIR3	SINE/MIR	(14)	194	20	1971735
532	21.4	11.0	4.3	chr2	40639195	40639355	(201554174)	C	PrimLTR79	LTR/ERV1	(0)	503	331	1972884
973	24.1	5.1	6.4	chr2	40731753	40732078	(201461451)	C	L1ME1	LINE/L1	(66)	6268	5792	1972995
1077	21.7	12.9	6.7	chr2	40732079	40732419	(201461110)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1972996
81	6.6	0.0	0.0	chr2	41983236	41983331	(200210198)	+	(AT)n	Simple_repeat	1	96	(0)	1974748
1553	25.9	6.0	4.8	chr2	41983332	41983465	(200210064)	C	Arthur1B	DNA/hAT-Tip100	(1095)	130	11	1974745
2113	13.8	0.3	0.0	chr2	42096565	42096861	(200096668)	+	AluJb	SINE/Alu	2	299	(13)	1974948
332	27.9	7.6	5.4	chr2	42101709	42101837	(200091692)	+	MIRb	SINE/MIR	84	215	(53)	1974956
17	22.8	0.0	2.1	chr2	42568414	42568461	(199625068)	+	(CCCCCA)n	Simple_repeat	1	48	(0)	1975881
18	27.4	2.8	1.4	chr2	42568560	42568631	(199624898)	+	(CCCCT)n	Simple_repeat	1	74	(0)	1975882
34	23.4	1.9	2.8	chr2	42568639	42568743	(199624786)	+	(GGC)n	Simple_repeat	1	107	(0)	1975883
13	14.7	0.0	3.1	chr2	42568923	42568958	(199624571)	+	(CTCCC)n	Simple_repeat	1	34	(0)	1975884
2167	12.4	0.3	0.7	chr2	42677333	42677638	(199515891)	C	AluSx	SINE/Alu	(2)	310	6	1976143
2296	8.2	2.8	6.1	chr2	42677639	42677856	(199515673)	+	THE1B	LTR/ERVL-MaLR	162	364	(0)	1976142
28	0.0	3.3	0.0	chr2	42810107	42810136	(199383393)	+	(CAGCCC)n	Simple_repeat	1	31	(0)	1976361
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
1230	19.9	11.1	5.1	chr2	44061737	44062091	(198131438)	+	LTR48	LTR/ERV1	77	455	(332)	1978486
676	20.6	9.7	2.4	chr2	44062109	44062317	(198131212)	+	LTR48B	LTR/ERV1	386	611	(33)	1978487
684	27.9	6.3	6.3	chr2	44062359	44062515	(198131014)	C	LTR16A	LTR/ERVL	(53)	398	239	1978488
26	30.2	2.5	2.4	chr2	44169031	44169152	(198024377)	+	(GGC)n	Simple_repeat	1	125	(0)	1978731
10170	11.4	3.1	3.5	chr2	44891372	44893008	(197300521)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	1979905
1464	29.9	4.8	1.3	chr2	45150394	45150870	(197042659)	C	MLT1J	LTR/ERVL-MaLR	(16)	496	2	1980306
13	15.9	2.7	2.6	chr2	45193362	45193398	(197000131)	+	GA-rich	Low_complexity	1	38	(0)	1980359
4710	12.8	2.4	1.2	chr2	45520442	45521174	(196672355)	+	LTR1B0	LTR/ERV1	1	742	(0)	1980828
4410	16.7	3.0	4.2	chr2	45878956	45879769	(196313760)	+	LTR1E	LTR/ERV1	1	804	(0)	1981428
3977	13.5	3.7	2.0	chr2	45879770	45880438	(196313091)	C	L1MA5A	LINE/L1	(29)	6268	5587	1981427
18	11.6	3.7	7.1	chr2	46542456	46542509	(195651020)	+	(CTC)n	Simple_repeat	1	56	(0)	1982426
868	13.7	0.0	4.3	chr2	46698223	46698361	(195495168)	+	FLAM_C	SINE/Alu	1	133	(10)	1982667
190	26.5	13.5	5.2	chr2	46863964	46864118	(195329411)	+	L2	LINE/L2	1846	2015	(1404)	1982955
17	4.9	0.0	0.0	chr2	46915807	46915865	(195277664)	+	(C)n	Simple_repeat	1	59	(0)	1983050
1707	10.8	0.0	16.9	chr2	47390471	47390832	(194802697)	C	AluSz6	SINE/Alu	(11)	301	1	1983974
2250	10.2	0.3	0.3	chr2	47391079	47391372	(194802157)	+	AluSx	SINE/Alu	1	294	(18)	1983975
12	16.8	0.0	0.0	chr2	47783895	47783921	(194409608)	+	G-rich	Low_complexity	1	27	(0)	1984799
18	25.1	3.3	0.0	chr2	47906520	47906580	(194286949)	+	G-rich	Low_complexity	1	63	(0)	1985047
755	25.0	9.0	1.3	chr2	48145927	48146241	(194047288)	C	MLT1F2	LTR/ERVL-MaLR	(194)	486	57	1985453
1028	23.1	11.6	9.1	chr2	48146244	48146557	(194046972)	C	L1MCc	LINE/L1	(5999)	424	88	1985454
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
17	13.2	1.4	4.0	chr2	48530025	48530063	(193663466)	+	G-rich	Low_complexity	1	37	(0)	1986145
34	12.1	0.0	0.0	chr2	48530116	48530170	(193663359)	+	(TCC)n	Simple_repeat	1	55	(0)	1986146
8664	13.2	8.9	3.4	chr2	53356266	53357752	(188835777)	+	LTR12C	LTR/ERV1	3	1579	(0)	1992476
17	24.0	0.0	6.1	chr2	53970798	53970863	(188222666)	+	(CCTCCC)n	Simple_repeat	1	66	(0)	1993469
19	16.7	7.4	0.0	chr2	53971071	53971124	(188222405)	+	(CGG)n	Simple_repeat	1	58	(0)	1993470
2394	27.0	13.9	1.7	chr2	54312282	54313302	(187880227)	+	L2a	LINE/L2	1339	2504	(915)	1994158
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
17	25.7	4.4	1.4	chr2	54457100	54457167	(187736362)	+	(GCCCCC)n	Simple_repeat	1	71	(0)	1994402
1513	31.1	9.9	14.3	chr2	54924863	54924998	(187268531)	C	L3	LINE/CR1	(2548)	1551	1409	1995022
1647	19.4	2.4	6.2	chr2	54924999	54925383	(187268146)	+	MLT1A	LTR/ERVL-MaLR	1	370	(4)	1995031
1513	31.1	9.9	14.3	chr2	54925384	54926108	(187267421)	C	L3	LINE/CR1	(2691)	1408	739	1995022
32	21.9	1.3	0.0	chr2	55050129	55050207	(187143322)	+	(TCCTCC)n	Simple_repeat	1	80	(0)	1995181
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
3471	10.6	3.6	6.3	chr2	56159834	56160407	(186033122)	+	LTR9B	LTR/ERV1	1	558	(86)	1997071
1988	17.1	0.3	0.3	chr2	56160435	56160726	(186032803)	+	AluJb	SINE/Alu	1	292	(20)	1997072
153	11.6	0.0	0.8	chr2	57377552	57377790	(184815739)	+	(AGGGG)n	Simple_repeat	1	239	(0)	1998488
13	18.5	2.6	2.5	chr2	58428270	58428308	(183765221)	+	GA-rich	Low_complexity	1	40	(0)	1999768
32	0.0	0.0	0.0	chr2	58428659	58428688	(183764841)	+	(TGC)n	Simple_repeat	1	30	(0)	1999769
388	31.4	6.7	5.4	chr2	58750688	58750835	(183442694)	C	MIRc	SINE/MIR	(117)	151	2	2000226
401	30.8	8.4	3.6	chr2	58751025	58751273	(183442256)	C	MIR	SINE/MIR	(0)	262	1	2000227
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
16	16.8	7.3	1.7	chr2	61177366	61177378	(181016151)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	2003842
19	11.6	0.0	4.9	chr2	61177379	61177419	(181016110)	+	G-rich	Low_complexity	1	41	(0)	2003843
13	18.8	0.0	5.0	chr2	61471025	61471035	(180722494)	+	(CACCGC)n	Simple_repeat	1	39	(0)	2004394
16	11.6	0.0	0.0	chr2	61471036	61471063	(180722466)	+	(CGC)n	Simple_repeat	1	28	(0)	2004395
841	19.1	1.8	1.2	chr2	61543208	61543371	(180650158)	+	MER20	DNA/hAT-Charlie	55	219	(0)	2004536
10518	14.6	1.2	0.7	chr2	62277169	62278806	(179914723)	+	MSTA-int	LTR/ERVL-MaLR	5	1651	(0)	2006170
21	26.4	1.6	0.0	chr2	62705943	62706005	(179487524)	+	(CGG)n	Simple_repeat	1	64	(0)	2006892
57	0.0	0.0	0.0	chr2	63043921	63043971	(179149558)	+	(T)n	Simple_repeat	1	51	(0)	2007372
11	14.1	0.0	8.1	chr2	63050325	63050361	(179143168)	+	G-rich	Low_complexity	1	37	(0)	2007375
26	22.8	0.0	0.0	chr2	63050635	63050690	(179142839)	+	G-rich	Low_complexity	1	56	(0)	2007376
17	9.1	0.0	0.0	chr2	64018742	64018765	(178174764)	+	(A)n	Simple_repeat	1	24	(0)	2008680
16	21.0	4.7	3.0	chr2	64019027	64019090	(178174439)	+	(CGGCGCC)n	Simple_repeat	1	67	(0)	2008681
21	29.5	2.6	0.0	chr2	64019220	64019297	(178174232)	+	(CCG)n	Simple_repeat	1	80	(0)	2008682
13	7.5	3.1	6.1	chr2	64019442	64019473	(178174056)	+	(GCCGG)n	Simple_repeat	1	33	(0)	2008683
15	13.2	0.0	5.4	chr2	64404560	64404596	(177788933)	+	(TCCCTC)n	Simple_repeat	1	37	(0)	2009296
14	12.3	5.4	2.6	chr2	64404775	64404811	(177788718)	+	(CATT)n	Simple_repeat	1	39	(0)	2009297
1736	18.9	3.3	14.6	chr2	64404818	64405263	(177788266)	+	MER66B	LTR/ERV1	1	381	(105)	2009298
17	18.8	0.0	2.3	chr2	64453917	64453960	(177739569)	+	(GGCAGGA)n	Simple_repeat	1	44	(0)	2009384
12	15.8	9.5	0.0	chr2	64454147	64454188	(177739341)	+	G-rich	Low_complexity	1	46	(0)	2009385
15	12.0	0.0	3.3	chr2	64454249	64454278	(177739251)	+	(GCA)n	Simple_repeat	1	30	(0)	2009386
12	21.6	0.0	4.9	chr2	64454328	64454368	(177739161)	+	(CCCT)n	Simple_repeat	1	41	(0)	2009387
27	27.4	4.3	0.0	chr2	64454389	64454480	(177739049)	+	(GC)n	Simple_repeat	1	96	(0)	2009388
12	9.6	8.6	2.6	chr2	64454608	64454642	(177738887)	+	(CGC)n	Simple_repeat	1	38	(0)	2009389
15	9.1	0.0	0.0	chr2	64645377	64645400	(177548129)	+	(GAA)n	Simple_repeat	1	24	(0)	2009699
18	22.0	0.0	5.2	chr2	64653805	64653862	(177539667)	+	(GGC)n	Simple_repeat	1	58	(0)	2009702
18	16.2	0.0	4.4	chr2	64750110	64750154	(177443375)	+	GA-rich	Low_complexity	1	45	(0)	2009874
22	3.6	0.0	0.0	chr2	64750746	64750774	(177442755)	+	(GAG)n	Simple_repeat	1	29	(0)	2009875
18	6.3	2.7	5.3	chr2	64750840	64750876	(177442653)	+	(GGC)n	Simple_repeat	1	38	(0)	2009876
184	29.6	5.8	1.0	chr2	64859572	64859670	(177333859)	C	MIRb	SINE/MIR	(124)	144	41	2010076
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
2450	7.4	0.0	0.0	chr2	65433164	65433462	(176760067)	C	AluSc	SINE/Alu	(10)	299	1	2011235
15	31.6	0.0	2.9	chr2	65436156	65436189	(176757340)	+	(CGCCC)n	Simple_repeat	1	68	(0)	2011239
13	13.6	2.9	2.9	chr2	65436190	65436223	(176757306)	+	(CCCCCG)n	Simple_repeat	1	35	(0)	2011240
641	28.1	7.3	0.8	chr2	65475664	65475907	(176717622)	C	MIR	SINE/MIR	(0)	262	2	2011331
511	31.0	2.5	6.8	chr2	65680303	65680551	(176512978)	C	MIRb	SINE/MIR	(4)	264	27	2011742
1241	13.1	1.4	0.9	chr2	66299895	66300110	(175893419)	+	L1MA4A	LINE/L1	6073	6289	(14)	2012620
36	0.0	0.0	2.9	chr2	66555255	66555289	(175638240)	+	(TC)n	Simple_repeat	1	35	(0)	2012896
33	24.8	6.1	0.8	chr2	66575335	66575449	(175618080)	+	(TC)n	Simple_repeat	1	122	(0)	2012928
18952	12.9	2.0	1.8	chr2	66656712	66662575	(175530954)	C	L1PA13	LINE/L1	(891)	5875	1	2013021
2173	12.8	0.7	2.6	chr2	66807237	66807549	(175385980)	+	AluSz	SINE/Alu	1	307	(5)	2013217
11	20.5	2.9	0.0	chr2	68252737	68252770	(173940759)	+	G-rich	Low_complexity	1	35	(0)	2015306
1378	9.6	0.0	0.0	chr2	69723974	69724150	(172469379)	+	AluSp	SINE/Alu	137	313	(0)	2017617
571	29.8	3.6	3.1	chr2	69724295	69724488	(172469041)	+	MER91A	DNA/hAT-Tip100	2	196	(0)	2017618
14	18.3	0.0	11.1	chr2	69724698	69724760	(172468769)	+	A-rich	Low_complexity	1	63	(0)	2017619
2274	10.2	0.0	0.0	chr2	69979030	69979332	(172214197)	C	AluSc	SINE/Alu	(6)	303	1	2018101
15	22.7	0.0	0.0	chr2	69979458	69979498	(172214031)	+	G-rich	Low_complexity	1	41	(0)	2018102
355	28.6	10.9	0.0	chr2	69979677	69979836	(172213693)	+	MamGypLTR1a	LTR/Gypsy	621	784	(0)	2018100
13	17.7	4.2	4.0	chr2	70554078	70554125	(171639404)	+	G-rich	Low_complexity	1	50	(0)	2019278
586	31.9	13.8	1.8	chr2	71410514	71410909	(170782620)	C	L2a	LINE/L2	(12)	3414	2964	2020616
2275	11.5	0.3	0.7	chr2	71410993	71411297	(170782232)	C	AluSx3	SINE/Alu	(7)	304	1	2020617
12	21.2	1.8	7.0	chr2	72935714	72935769	(169257760)	+	(CCCCCTG)n	Simple_repeat	1	57	(0)	2022823
199	36.2	5.4	0.0	chr2	72935875	72936015	(169257514)	+	L2c	LINE/L2	2923	3071	(316)	2022822
30	19.8	1.9	6.5	chr2	73284383	73284487	(168909042)	+	GA-rich	Low_complexity	1	107	(0)	2023446
15	23.1	0.0	4.0	chr2	73284634	73284683	(168908846)	+	(GGCTCCC)n	Simple_repeat	1	50	(0)	2023447
18	9.1	5.3	2.5	chr2	73385805	73385842	(168807687)	+	(CTC)n	Simple_repeat	1	40	(0)	2023643
19	20.3	0.0	2.1	chr2	73385843	73385850	(168807679)	+	(CTCCCC)n	Simple_repeat	3	48	(0)	2023644
51	2.0	0.0	0.0	chr2	73385904	73385953	(168807576)	+	(GGA)n	Simple_repeat	1	50	(0)	2023645
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
2025	19.0	4.0	3.5	chr2	73819040	73819420	(168374109)	C	L1MB7	LINE/L1	(63)	6121	5730	2024254
305	21.3	44.9	7.0	chr2	73819432	73819587	(168373942)	C	MIR	SINE/MIR	(15)	253	39	2024256
401	26.2	5.1	2.0	chr2	73819590	73819741	(168373788)	C	L1ME4b	LINE/L1	(12)	880	724	2024257
22	8.8	2.7	0.0	chr2	74003173	74003209	(168190320)	+	(TGTG)n	Simple_repeat	1	38	(0)	2024613
13	29.1	3.1	1.5	chr2	74553991	74554054	(167639475)	+	(TCTCCCT)n	Simple_repeat	1	66	(0)	2025553
16	14.5	5.3	0.0	chr2	74554224	74554261	(167639268)	+	(GCG)n	Simple_repeat	1	40	(0)	2025554
432	34.3	3.4	2.9	chr2	75853791	75853994	(166339535)	C	MIR	SINE/MIR	(34)	228	24	2027611
5661	8.5	22.1	2.7	chr2	77114590	77115602	(165077927)	C	MER11A	LTR/ERVK	(0)	1266	1	2029206
98	24.7	3.7	2.4	chr2	77724998	77725318	(164468211)	+	G-rich	Low_complexity	1	333	(0)	2030019
3925	7.3	0.9	0.0	chr2	79169834	79170353	(163023176)	C	LTR17	LTR/ERV1	(1)	779	255	2031892
289	32.4	2.3	3.0	chr2	79170354	79170620	(163022909)	C	L1ME3Cz	LINE/L1	(245)	752	488	2031890
3960	21.9	9.1	8.0	chr2	82042653	82044504	(160149025)	+	MER52A	LTR/ERV1	1	1229	(526)	2035785
23	18.5	0.0	0.0	chr2	85133230	85133277	(157060252)	+	(GT)n	Simple_repeat	1	48	(0)	2040181
19	15.0	6.2	4.3	chr2	85133338	85133404	(157060125)	+	(CCTC)n	Simple_repeat	1	68	(0)	2040182
12	28.1	1.9	1.9	chr2	85133482	85133534	(157059995)	+	(GCCGG)n	Simple_repeat	1	54	(0)	2040183
16	24.5	3.3	1.6	chr2	85754061	85754120	(156439409)	+	G-rich	Low_complexity	1	62	(0)	2041440
467	29.3	7.7	0.0	chr2	86042480	86042685	(156150844)	+	LTR33	LTR/ERVL	40	263	(268)	2041977
6415	5.3	0.7	33.6	chr2	86544344	86546400	(155647129)	C	SVA_A	Retroposon/SVA	(0)	1387	13	2042820
787	13.7	4.2	6.4	chr2	86546402	86546438	(155647091)	C	L1MB5	LINE/L1	(755)	5429	5396	2042819
2436	10.7	0.0	0.0	chr2	86546439	86546737	(155646792)	C	AluSq	SINE/Alu	(14)	299	1	2042821
15	4.8	0.0	0.0	chr2	86836115	86836136	(155357393)	+	(GGTG)n	Simple_repeat	1	22	(0)	2043294
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
392	26.7	2.8	4.5	chr2	95687275	95687384	(146506145)	C	L2b	LINE/L2	(23)	3352	3245	2051056
3222	18.1	9.9	0.4	chr2	95837108	95838096	(146355433)	+	L1MC	LINE/L1	4470	5574	(759)	2051270
809	19.9	7.5	0.9	chr2	96216909	96217131	(145976398)	C	Charlie2b	DNA/hAT-Charlie	(10)	2772	2534	2051770
2307	10.2	0.3	0.6	chr2	96217144	96217468	(145976061)	C	LTR17	LTR/ERV1	(456)	324	1	2051771
2276	5.3	4.6	0.0	chr2	96217469	96217759	(145975770)	C	HERV17-int	LTR/ERV1	(0)	8626	8335	2051771
2314	10.0	0.7	0.0	chr2	96415268	96415568	(145777961)	+	AluSx1	SINE/Alu	5	307	(5)	2052114
1595	20.1	6.3	4.3	chr2	96415608	96416029	(145777500)	+	MER31A	LTR/ERV1	46	476	(9)	2052115
348	15.9	0.0	0.0	chr2	96664070	96664132	(145529397)	+	Alu	SINE/Alu	239	301	(0)	2052547
30	17.1	2.9	0.0	chr2	96664138	96664212	(145529317)	+	GA-rich	Low_complexity	1	77	(0)	2052548
2095	22.6	2.9	3.5	chr2	96664213	96664730	(145528799)	C	L1ME1	LINE/L1	(58)	6121	5607	2052549
454	28.6	4.2	2.7	chr2	96970870	96971056	(145222473)	C	L1ME4b	LINE/L1	(0)	892	703	2053092
14	13.6	0.0	5.6	chr2	96971057	96971092	(145222437)	+	(ACACC)n	Simple_repeat	1	36	(0)	2053093
53	29.8	2.6	0.5	chr2	96971180	96971369	(145222160)	+	(TCTC)n	Simple_repeat	1	195	(0)	2053094
532	21.3	15.2	2.9	chr2	97490005	97490294	(144703235)	C	L1PA12	LINE/L1	(5814)	1167	814	2053734
502	20.2	0.0	0.0	chr2	97490308	97490401	(144703128)	C	L1PA12	LINE/L1	(6078)	903	810	2053734
256	20.3	4.8	0.0	chr2	97490411	97490469	(144703060)	C	L1PA12	LINE/L1	(6077)	904	843	2053735
965	22.0	6.1	13.0	chr2	97490473	97490948	(144702581)	+	L1PA12	LINE/L1	734	1174	(5807)	2053736
769	20.0	4.1	2.1	chr2	98608861	98609049	(143584480)	C	MER53	DNA/hAT	(0)	193	1	2055213
2811	15.0	9.1	0.6	chr2	100178129	100178619	(142014910)	+	MER66C	LTR/ERV1	1	537	(18)	2057508
18	12.2	0.0	0.0	chr2	100237780	100237806	(141955723)	+	(A)n	Simple_repeat	1	27	(0)	2057590
14	28.6	2.6	3.8	chr2	100417614	100417690	(141775839)	+	(CGCC)n	Simple_repeat	1	79	(0)	2057844
41	14.8	2.8	5.4	chr2	100820014	100820121	(141373408)	+	GA-rich	Low_complexity	1	111	(0)	2058575
26	23.5	1.3	2.5	chr2	100820198	100820275	(141373254)	+	(GCG)n	Simple_repeat	1	79	(0)	2058576
15	18.8	2.3	2.2	chr2	100820364	100820407	(141373122)	+	(CCCGG)n	Simple_repeat	1	45	(0)	2058577
41	0.0	0.0	0.0	chr2	101519020	101519057	(140674472)	+	(CTCCCCTCC)n	Simple_repeat	1	38	(0)	2059732
25	19.8	1.5	1.5	chr2	101697611	101697675	(140495854)	+	(CCTCCG)n	Simple_repeat	1	66	(0)	2060083
19	16.6	2.0	2.0	chr2	101697755	101697803	(140495726)	+	G-rich	Low_complexity	1	50	(0)	2060084
13	16.6	2.8	2.7	chr2	101697919	101697954	(140495575)	+	(CGC)n	Simple_repeat	1	37	(0)	2060085
2722	4.2	0.0	0.0	chr2	101758852	101759157	(140434372)	+	AluY	SINE/Alu	1	306	(5)	2060183
147	9.8	0.8	9.8	chr2	101759471	101759834	(140433695)	+	(TCCCC)n	Simple_repeat	1	367	(0)	2060184
1764	17.0	0.0	0.7	chr2	101759864	101760140	(140433389)	C	AluSx	SINE/Alu	(32)	280	6	2060185
452	24.4	2.3	0.0	chr2	101909145	101909271	(140284258)	C	L1ME1	LINE/L1	(2)	6177	6048	2060340
329	34.1	8.8	4.6	chr2	101909354	101909657	(140283872)	C	HAL1ME	LINE/L1	(285)	2180	1863	2060341
13	29.5	0.0	3.5	chr2	102759275	102759331	(139434198)	+	(AAC)n	Simple_repeat	1	57	(0)	2061500
187	30.2	13.7	0.0	chr2	102759437	102759499	(139434030)	+	L2c	LINE/L2	3275	3347	(40)	2061501
109	4.3	1.9	3.2	chr2	102886742	102886896	(139306633)	+	(TTTC)n	Simple_repeat	1	158	(0)	2061673
94	10.4	4.2	3.0	chr2	102886897	102887089	(139306440)	+	(CCCTC)n	Simple_repeat	1	195	(0)	2061674
1984	16.6	1.0	0.0	chr2	102887090	102887391	(139306138)	C	AluSz	SINE/Alu	(7)	305	1	2061675
54	31.4	1.4	1.4	chr2	103361756	103361906	(138831623)	+	(TCC)n	Simple_repeat	1	153	(0)	2062223
64	8.0	0.0	2.1	chr2	103361907	103362003	(138831526)	+	(CCT)n	Simple_repeat	1	97	(0)	2062224
54	31.4	1.4	1.4	chr2	103362004	103362068	(138831461)	+	(TCC)n	Simple_repeat	1	63	(0)	2062225
2039	11.9	4.5	0.0	chr2	103362073	103362367	(138831162)	C	AluSx1	SINE/Alu	(2)	310	2	2062226
2583	6.9	0.0	0.0	chr2	103482493	103482796	(138710733)	C	AluY	SINE/Alu	(7)	304	1	2062375
1269	21.1	6.5	2.6	chr2	103530513	103530909	(138662620)	C	MER54B	LTR/ERVL	(474)	427	2	2062427
307	28.0	7.8	6.0	chr2	105068465	105068779	(137124750)	C	L1MC5a	LINE/L1	(1829)	948	628	2064356
15	10.0	0.0	0.0	chr2	105143794	105143815	(137049714)	+	(AC)n	Simple_repeat	1	22	(0)	2064465
14	12.5	0.0	3.5	chr2	105143815	105143855	(137049674)	+	(CCT)n	Simple_repeat	1	39	(0)	2064466
29	23.3	1.2	2.4	chr2	105143996	105144079	(137049450)	+	(CCT)n	Simple_repeat	1	85	(0)	2064467
23	13.5	0.0	2.3	chr2	105144561	105144604	(137048925)	+	(CCA)n	Simple_repeat	1	44	(0)	2064468
2680	17.1	2.3	3.4	chr2	105255616	105256014	(136937515)	+	MER74A	LTR/ERVL	132	528	(30)	2064647
230	30.8	3.4	5.3	chr2	105256264	105256414	(136937115)	+	L2a	LINE/L2	2931	3078	(297)	2064649
3736	12.9	10.3	3.6	chr2	106235011	106236109	(135957420)	C	MER11A	LTR/ERVK	(0)	1236	2	2066061
29	8.2	0.0	0.0	chr2	106582484	106582522	(135611007)	+	(A)n	Simple_repeat	1	39	(0)	2066716
1492	22.2	9.2	3.4	chr2	107005061	107005539	(135187990)	C	Charlie1b	DNA/hAT-Charlie	(0)	523	15	2067300
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
24	2.5	7.0	2.2	chr2	108534653	108534695	(133658834)	+	(CGGGC)n	Simple_repeat	1	46	(0)	2069393
2167	22.4	8.0	4.6	chr2	108787226	108787981	(133405548)	C	L1MC4	LINE/L1	(3)	8039	7271	2069807
2176	8.8	1.8	0.4	chr2	109604445	109604717	(132588812)	+	AluYm1	SINE/Alu	1	277	(34)	2070939
17	35.4	2.2	2.1	chr2	109604718	109604735	(132588794)	+	GA-rich	Low_complexity	75	92	(0)	2070940
12	4.5	4.0	3.9	chr2	111120579	111120603	(131072926)	+	(GCC)n	Simple_repeat	1	26	(0)	2073127
51	3.8	0.0	0.0	chr2	111120967	111121021	(131072508)	+	(CGC)n	Simple_repeat	1	55	(0)	2073128
3621	9.3	4.4	0.4	chr2	112044492	112044989	(130148540)	C	LTR17	LTR/ERV1	(6)	774	256	2074462
5185	19.7	5.1	9.4	chr2	112044994	112045021	(130148508)	C	L1MEc	LINE/L1	(4811)	1589	1568	2074460
2107	15.1	0.0	0.0	chr2	112045022	112045319	(130148210)	C	AluSz6	SINE/Alu	(14)	298	1	2074464
535	29.8	7.4	3.3	chr2	112345601	112345961	(129847568)	+	L1MEc	LINE/L1	36	412	(5988)	2074930
601	14.3	0.5	0.2	chr2	112346177	112347163	(129846366)	+	(CCACCA)n	Simple_repeat	1	992	(0)	2074931
182	35.7	6.7	0.0	chr2	113232617	113232686	(128960843)	C	MamTip2	DNA/hAT-Tip100	(53)	252	178	2076456
12	13.9	4.5	4.3	chr2	113233008	113233020	(128960509)	+	(CTCCT)n	Simple_repeat	1	13	(0)	2076457
36	4.9	0.0	0.0	chr2	113233021	113233063	(128960466)	+	(CCCCT)n	Simple_repeat	1	43	(0)	2076458
12	13.9	4.5	4.3	chr2	113233064	113233093	(128960436)	+	(CTCCT)n	Simple_repeat	4	33	(0)	2076459
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
14	21.6	2.2	2.2	chr2	118842800	118842844	(123350685)	+	(CTCTCT)n	Simple_repeat	1	46	(0)	2084326
14	21.5	2.2	2.2	chr2	118848013	118848057	(123345472)	+	(TCCCCC)n	Simple_repeat	1	46	(0)	2084335
186	22.2	0.0	4.5	chr2	119431377	119431442	(122762087)	C	MIRc	SINE/MIR	(139)	129	67	2085324
17	8.5	2.3	6.8	chr2	119431777	119431819	(122761710)	+	(CGCCC)n	Simple_repeat	1	44	(0)	2085325
17	0.0	0.0	0.0	chr2	119628271	119628289	(122565240)	+	(TC)n	Simple_repeat	1	19	(0)	2085661
47	0.0	0.0	0.0	chr2	119628295	119628334	(122565195)	+	(GT)n	Simple_repeat	1	40	(0)	2085662
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
313	32.3	16.0	4.8	chr2	120266802	120267110	(121926419)	C	L2c	LINE/L2	(5)	3382	3033	2086681
11	19.7	7.1	3.3	chr2	120267152	120267207	(121926322)	+	(TTTTAG)n	Simple_repeat	1	60	(0)	2086682
15	18.4	2.7	0.0	chr2	120736788	120736824	(121456705)	+	(CCTT)n	Simple_repeat	1	38	(0)	2087494
15	35.9	1.0	2.9	chr2	120736815	120736915	(121456614)	+	(CCTCC)n	Simple_repeat	1	102	(0)	2087495
13	9.7	15.8	1.5	chr2	120847601	120847657	(121345872)	+	(TTGGA)n	Simple_repeat	1	66	(0)	2087655
289	26.9	3.6	5.3	chr2	121909282	121909395	(120284134)	+	MamTip2	DNA/hAT-Tip100	35	146	(159)	2089581
14804	23.3	4.3	6.0	chr2	125516349	125518265	(116675264)	+	L1PA17	LINE/L1	1270	3159	(3756)	2094709
23	22.1	2.9	1.4	chr2	127107093	127107162	(115086367)	+	(GAGC)n	Simple_repeat	1	72	(0)	2096882
288	29.9	10.7	3.7	chr2	127128299	127128489	(115065040)	C	MLT1L	LTR/ERVL-MaLR	(50)	560	355	2096918
284	28.6	1.4	0.0	chr2	127128595	127128664	(115064865)	C	MLT1L	LTR/ERVL-MaLR	(332)	180	110	2096918
13	10.0	5.9	2.8	chr2	127174448	127174481	(115019048)	+	(CCCACT)n	Simple_repeat	1	36	(0)	2097001
209	26.2	0.0	0.0	chr2	127174553	127174594	(115018935)	+	L2b	LINE/L2	3333	3374	(1)	2097002
331	32.8	9.6	2.6	chr2	127174598	127174791	(115018738)	+	MIRb	SINE/MIR	54	262	(6)	2097003
31	21.5	0.0	0.0	chr2	127387386	127387447	(114806082)	+	(AC)n	Simple_repeat	1	62	(0)	2097356
43	25.2	5.0	3.3	chr2	127407870	127408069	(114785460)	+	(CCTCCT)n	Simple_repeat	1	210	(0)	2097395
1982	15.7	6.6	4.7	chr2	127857370	127857798	(114335731)	+	MER67A	LTR/ERV1	106	543	(0)	2098143
19	17.5	3.6	3.5	chr2	127858082	127858137	(114335392)	+	(CGC)n	Simple_repeat	1	58	(0)	2098144
17	10.0	3.1	0.0	chr2	128322219	128322270	(113871259)	+	(GGCCCC)n	Simple_repeat	1	53	(0)	2099035
342	29.1	6.6	6.0	chr2	128472254	128472403	(113721126)	+	L2b	LINE/L2	3054	3204	(171)	2099255
78	21.8	2.5	1.5	chr2	128664319	128664517	(113529012)	+	(CCTCT)n	Simple_repeat	1	204	(0)	2099546
26	0.0	0.0	0.0	chr2	130372356	130372380	(111821149)	+	(GACGGG)n	Simple_repeat	1	25	(0)	2101734
757	18.4	13.8	1.4	chr2	130391863	130392083	(111801446)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2372	2101762
4063	14.5	9.4	0.1	chr2	132544473	132545168	(109648361)	C	LTR27C	LTR/ERV1	(0)	767	1	2104721
6083	9.4	17.5	2.6	chr2	133206274	133207346	(108986183)	+	MER11A	LTR/ERVK	1	1266	(0)	2105630
735	30.7	9.1	2.5	chr2	133207347	133207454	(108986075)	C	L1M5	LINE/L1	(2234)	3912	3797	2105629
37	14.4	4.2	1.6	chr2	134603821	134603925	(107589604)	+	G-rich	Low_complexity	1	107	(0)	2107631
462	30.8	17.5	1.8	chr2	135078320	135078645	(107114884)	C	L1M5	LINE/L1	(1087)	5059	4670	2108425
64	1.6	0.0	0.0	chr2	135078646	135078707	(107114822)	+	(TCCCC)n	Simple_repeat	1	62	(0)	2108426
462	30.8	17.5	1.8	chr2	135078708	135078720	(107114809)	C	L1M5	LINE/L1	(1477)	4669	4656	2108425
1453	15.8	8.9	4.1	chr2	135078725	135078872	(107114657)	C	AluJb	SINE/Alu	(32)	280	110	2108427
11598	8.8	1.8	0.0	chr2	135452356	135453904	(106739625)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	4	2109026
7537	10.0	2.6	1.6	chr2	136200730	136201886	(105991643)	C	L1ME4a	LINE/L1	(1766)	4380	3211	2110313
2553	5.1	2.8	2.5	chr2	136201887	136202210	(105991319)	C	LTR17	LTR/ERV1	(455)	325	1	2110317
10960	12.3	2.6	0.3	chr2	142309853	142311445	(99882084)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	1	2118613
1437	13.4	0.4	5.5	chr2	144262348	144262585	(97930944)	+	AluJr	SINE/Alu	73	298	(14)	2121162
197	12.4	0.5	7.2	chr2	144262590	144263031	(97930498)	+	G-rich	Low_complexity	1	444	(0)	2121163
201	22.8	8.1	6.6	chr2	144263087	144263147	(97930382)	+	MIR	SINE/MIR	190	251	(11)	2121164
12	30.9	1.6	1.6	chr2	144516844	144516904	(97676625)	+	(CCGCCC)n	Simple_repeat	1	62	(0)	2121494
19	22.7	4.5	4.3	chr2	144516939	144517027	(97676502)	+	G-rich	Low_complexity	1	93	(0)	2121495
15	0.0	0.0	0.0	chr2	144517172	144517190	(97676339)	+	(CGC)n	Simple_repeat	1	19	(0)	2121496
63	22.8	2.5	0.4	chr2	144847670	144847809	(97345720)	+	GA-rich	Low_complexity	1	143	(0)	2121914
22631	3.1	0.2	0.1	chr2	146405742	146411341	(95782188)	+	L1PA2	LINE/L1	127	6155	(0)	2123879
1070	31.4	6.4	0.0	chr2	146696232	146696597	(95496932)	+	LTR40a	LTR/ERVL	3	393	(126)	2124223
718	20.3	2.9	1.4	chr2	146696612	146696749	(95496780)	+	AluJr4	SINE/Alu	138	277	(35)	2124224
45	0.0	0.0	2.3	chr2	146696750	146696792	(95496737)	+	(GA)n	Simple_repeat	1	43	(0)	2124225
96	6.0	0.0	5.1	chr2	146696796	146696951	(95496578)	+	(GAGGG)n	Simple_repeat	1	156	(0)	2124226
3869	10.7	2.1	2.5	chr2	146696994	146697560	(95495969)	C	MER61E	LTR/ERV1	(4)	565	1	2124227
2683	11.4	23.7	1.0	chr2	147446216	147446704	(94746825)	C	MER51A	LTR/ERV1	(0)	634	1	2125243
748	25.9	15.5	5.6	chr2	147446705	147446970	(94746559)	+	MLT1I	LTR/ERVL-MaLR	118	411	(0)	2125242
17	16.1	3.9	3.7	chr2	148875338	148875389	(93318140)	+	G-rich	Low_complexity	1	54	(0)	2127293
14	27.3	0.0	2.0	chr2	148875565	148875614	(93317915)	+	(CCCGGC)n	Simple_repeat	1	50	(0)	2127294
17	20.7	2.9	5.6	chr2	148876577	148876645	(93316884)	+	(CCCTCT)n	Simple_repeat	1	71	(0)	2127295
16315	13.3	6.3	0.8	chr2	149297836	149302397	(92891132)	C	L1PBa	LINE/L1	(1778)	5084	221	2127882
471	26.5	7.4	0.0	chr2	149302469	149302630	(92890899)	C	LTR33	LTR/ERVL	(0)	515	341	2127883
294	28.8	9.0	1.8	chr2	149302751	149302863	(92890666)	C	LTR33	LTR/ERVL	(356)	159	38	2127883
1323	34.0	9.3	1.6	chr2	151141343	151142197	(91051332)	+	L2	LINE/L2	2018	2944	(475)	2130387
2822	2.5	0.0	3.2	chr2	151288962	151289276	(90904253)	+	AluY	SINE/Alu	1	305	(6)	2130625
9977	12.2	4.6	1.2	chr2	152058256	152059781	(90133748)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2131779
36	22.2	1.2	0.0	chr2	152098738	152098822	(90094707)	+	GA-rich	Low_complexity	1	86	(0)	2131855
26	17.8	0.0	3.3	chr2	152098885	152098945	(90094584)	+	GA-rich	Low_complexity	1	61	(0)	2131855
6502	8.4	16.1	3.9	chr2	152163150	152164254	(90029275)	+	MER11A	LTR/ERVK	1	1266	(0)	2131972
2316	10.0	0.3	0.3	chr2	152164342	152164640	(90028889)	C	AluSp	SINE/Alu	(13)	300	2	2131973
508	17.3	0.0	0.0	chr2	152635918	152635998	(89557531)	+	AluJo	SINE/Alu	207	287	(25)	2132732
7156	17.2	12.9	3.1	chr2	153221508	153223084	(88970445)	C	MER52A	LTR/ERV1	(0)	1755	1	2133506
2067	7.5	0.3	0.9	chr2	153871945	153872268	(88321261)	+	LTR12D	LTR/ERV1	4	325	(929)	2134207
346	17.7	2.5	2.5	chr2	156393922	156394002	(85799527)	C	MER1B	DNA/hAT-Charlie	(0)	339	259	2137380
1229	14.4	9.2	6.5	chr2	156394022	156394296	(85799233)	C	MER1B	DNA/hAT-Charlie	(56)	283	1	2137381
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
53	20.0	2.0	3.9	chr2	156648787	156648923	(85544606)	+	(TTCCC)n	Simple_repeat	1	134	(0)	2137749
1678	18.2	2.5	1.5	chr2	156648924	156649197	(85544332)	C	AluJb	SINE/Alu	(35)	277	1	2137750
53	20.0	2.0	3.9	chr2	156649198	156649209	(85544320)	+	(TTCCC)n	Simple_repeat	5	16	(0)	2137751
1111	30.6	6.6	1.4	chr2	156753815	156754228	(85439301)	+	L2	LINE/L2	2530	2966	(453)	2137884
327	31.1	1.7	1.1	chr2	156754271	156754422	(85439107)	C	MIR	SINE/MIR	(0)	262	3	2137885
15543	18.9	3.4	4.7	chr2	157605678	157613326	(84580203)	C	L1MA4A	LINE/L1	(8)	7714	358	2138953
13	14.7	3.3	0.0	chr2	157628876	157628905	(84564624)	+	G-rich	Low_complexity	1	31	(0)	2138967
26	6.2	0.0	0.0	chr2	157875869	157875902	(84317627)	+	(GCGGG)n	Simple_repeat	1	34	(0)	2139334
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
17	10.4	0.0	3.0	chr2	157876764	157876796	(84316733)	+	(GGGC)n	Simple_repeat	1	33	(0)	2139336
1253	15.6	2.8	2.3	chr2	157878903	157879118	(84314411)	C	MER20	DNA/hAT-Charlie	(0)	219	3	2139342
17	14.3	6.2	2.0	chr2	158456895	158456942	(83736587)	+	G-rich	Low_complexity	1	51	(0)	2140158
14	27.7	1.7	1.7	chr2	158457049	158457106	(83736423)	+	G-rich	Low_complexity	1	59	(0)	2140159
631	24.4	7.5	0.5	chr2	159000874	159001058	(83192471)	C	MIR	SINE/MIR	(23)	239	41	2140965
16	0.0	5.0	0.0	chr2	159616568	159616587	(82576942)	+	(TC)n	Simple_repeat	1	21	(0)	2141865
216	33.1	19.4	3.5	chr2	160299722	160300319	(81893210)	C	L2c	LINE/L2	(1891)	1528	813	2142880
32	3.0	0.0	0.0	chr2	160493445	160493478	(81700051)	+	(CGG)n	Simple_repeat	1	34	(0)	2143159
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
21335	11.6	2.2	0.5	chr2	161457299	161462858	(80730671)	C	L1P3	LINE/L1	(795)	5666	6	2144462
1543	24.3	6.7	0.9	chr2	161462882	161463413	(80730116)	C	L1MEf	LINE/L1	(2475)	3671	3107	2144458
15	30.4	2.5	2.4	chr2	163348534	163348613	(78844916)	+	(CTGCTT)n	Simple_repeat	1	82	(0)	2146828
15	0.0	0.0	7.4	chr2	163736336	163736362	(78457167)	+	(GGCC)n	Simple_repeat	1	27	(0)	2147386
13	20.1	0.0	2.8	chr2	163736893	163736928	(78456601)	+	(CCCT)n	Simple_repeat	1	36	(0)	2147387
27	21.4	2.0	5.8	chr2	164621483	164621593	(77571936)	+	G-rich	Low_complexity	1	106	(0)	2148539
7328	18.3	3.8	1.9	chr2	164899665	164902021	(77291508)	C	L1MA9	LINE/L1	(25)	6287	3877	2148946
36	0.0	0.0	0.0	chr2	165953652	165953685	(76239844)	+	(CCCGCTCA)n	Simple_repeat	1	34	(0)	2150388
19	9.8	0.0	2.9	chr2	166376052	166376086	(75817443)	+	(CCCT)n	Simple_repeat	1	35	(0)	2150940
24	6.6	0.0	0.0	chr2	166376221	166376252	(75817277)	+	(GT)n	Simple_repeat	1	32	(0)	2150941
4769	9.0	2.7	1.6	chr2	166415551	166416562	(75776967)	+	MER11A	LTR/ERVK	1	1266	(0)	2150989
28	6.0	0.0	0.0	chr2	168247055	168247089	(73946440)	+	(A)n	Simple_repeat	1	35	(0)	2153271
30	0.0	0.0	0.0	chr2	168247287	168247314	(73946215)	+	(GCCGGG)n	Simple_repeat	1	28	(0)	2153272
26	25.8	0.0	0.0	chr2	168247320	168247388	(73946141)	+	(GCC)n	Simple_repeat	1	69	(0)	2153273
24	17.2	0.0	6.1	chr2	168247506	168247571	(73945958)	+	(CGC)n	Simple_repeat	1	66	(0)	2153274
17	26.2	4.0	2.5	chr2	168247582	168247671	(73945858)	+	GA-rich	Low_complexity	1	91	(0)	2153275
17	11.3	2.4	4.7	chr2	168247729	168247770	(73945759)	+	(CCGCTC)n	Simple_repeat	1	43	(0)	2153276
647	24.5	11.0	5.8	chr2	168355019	168355412	(73838117)	+	LTR33	LTR/ERVL	83	499	(16)	2153443
13	28.1	0.0	0.0	chr2	168455786	168455829	(73737700)	+	(CCTTCCC)n	Simple_repeat	1	44	(0)	2153582
14	13.1	9.5	0.0	chr2	168456095	168456136	(73737393)	+	(TGCGCCC)n	Simple_repeat	1	46	(0)	2153583
28	14.8	0.0	1.9	chr2	168456296	168456349	(73737180)	+	(GCG)n	Simple_repeat	1	54	(0)	2153584
9014	14.0	2.0	9.8	chr2	168604911	168606680	(73586849)	+	MSTA-int	LTR/ERVL-MaLR	1	1629	(2)	2153811
20	24.4	1.4	6.0	chr2	169734378	169734473	(72459056)	+	G-rich	Low_complexity	1	91	(0)	2155496
3873	20.3	7.6	3.6	chr2	170532836	170533020	(71660509)	+	L1MC4	LINE/L1	7865	8042	(0)	2156785
16	19.1	2.2	2.2	chr2	170816497	170816541	(71376988)	+	G-rich	Low_complexity	1	46	(0)	2157297
11	28.2	0.0	2.2	chr2	170929816	170929860	(71263669)	+	(GGAGCC)n	Simple_repeat	1	45	(0)	2157501
21	19.6	2.5	6.2	chr2	171160204	171160282	(71033247)	+	G-rich	Low_complexity	1	81	(0)	2157910
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
16	22.6	1.8	3.6	chr2	171160827	171160881	(71032648)	+	(CGG)n	Simple_repeat	1	56	(0)	2157912
241	37.1	0.0	0.0	chr2	172109859	172109955	(70083574)	+	MIR	SINE/MIR	81	177	(85)	2159606
13	26.9	3.8	0.0	chr2	172735765	172735817	(69457712)	+	(CCTCCCG)n	Simple_repeat	1	55	(0)	2160609
17	14.6	4.1	3.9	chr2	172735898	172735946	(69457583)	+	(GCGGAG)n	Simple_repeat	1	51	(0)	2160610
10001	8.5	6.2	0.5	chr2	172802600	172804094	(69389435)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2160717
343	27.8	8.6	10.4	chr2	173076036	173076236	(69117293)	C	L1M4b	LINE/L1	(6211)	656	460	2161104
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
11702	11.5	1.6	3.2	chr2	173592373	173594030	(68599499)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2161900
19	25.0	1.2	5.8	chr2	173963715	173963799	(68229730)	+	(GGCGGC)n	Simple_repeat	1	86	(0)	2162453
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
30	27.0	2.1	1.0	chr2	173964409	173964502	(68229027)	+	(GCC)n	Simple_repeat	1	96	(0)	2162457
15	28.4	0.0	0.0	chr2	173964569	173964615	(68228914)	+	G-rich	Low_complexity	1	47	(0)	2162458
18	0.0	0.0	0.0	chr2	173964685	173964706	(68228823)	+	(CGG)n	Simple_repeat	1	22	(0)	2162459
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
27	27.8	4.9	3.5	chr2	173964826	173964867	(68228662)	+	(CTCCCCT)n	Simple_repeat	4	170	(0)	2162461
12	17.1	2.9	2.8	chr2	173964835	173964869	(68228660)	+	(CGCT)n	Simple_repeat	1	36	(0)	2162462
1911	11.8	1.0	5.9	chr2	174247074	174247395	(67946134)	+	AluSz6	SINE/Alu	1	306	(6)	2162947
13	18.5	2.6	2.5	chr2	174682243	174682281	(67511248)	+	G-rich	Low_complexity	1	40	(0)	2163676
12	12.6	2.5	7.3	chr2	174682577	174682616	(67510913)	+	(GCGCCC)n	Simple_repeat	1	41	(0)	2163677
730	29.9	12.9	2.7	chr2	175899277	175899921	(66293608)	+	L2a	LINE/L2	2687	3412	(14)	2165385
876	31.0	11.3	2.5	chr2	176004613	176005356	(66188173)	C	L2b	LINE/L2	(208)	3167	2343	2165518
18	28.0	2.9	4.7	chr2	176092724	176092826	(66100703)	+	GA-rich	Low_complexity	1	106	(0)	2165652
25	15.8	6.9	1.3	chr2	176092850	176092924	(66100605)	+	G-rich	Low_complexity	1	79	(0)	2165653
13	5.3	0.0	0.0	chr2	176092979	176092998	(66100531)	+	(CGG)n	Simple_repeat	1	20	(0)	2165654
36	4.9	0.0	0.0	chr2	176093058	176093099	(66100430)	+	(GGC)n	Simple_repeat	1	42	(0)	2165655
234	21.9	14.0	0.0	chr2	176269793	176269871	(65923658)	C	MIR1_Amn	SINE/MIR	(98)	170	83	2165875
12	17.3	6.1	3.9	chr2	177212813	177212861	(64980668)	+	(CGCCGT)n	Simple_repeat	1	52	(0)	2167292
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
11	11.7	7.3	4.5	chr2	177264340	177264380	(64929149)	+	(CCCTGC)n	Simple_repeat	1	44	(0)	2167360
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
253	27.4	0.0	0.0	chr2	177430966	177431027	(64762502)	+	Tigger10	DNA/TcMar-Tigger	963	1024	(820)	2167650
4239	10.5	5.7	2.0	chr2	177431047	177432049	(64761480)	C	MER11A	LTR/ERVK	(0)	1266	1	2167651
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
207	25.5	0.0	0.0	chr2	178073265	178073311	(64120218)	+	L2a	LINE/L2	3373	3419	(7)	2168499
2470	10.3	0.3	1.0	chr2	178208003	178208313	(63985216)	+	AluSx3	SINE/Alu	1	309	(2)	2168736
238	19.1	2.9	1.4	chr2	178208554	178208622	(63984907)	C	HAL1	LINE/L1	(717)	1790	1721	2168737
53	12.8	0.0	0.0	chr2	178208630	178208715	(63984814)	+	(CCCTC)n	Simple_repeat	1	86	(0)	2168738
46	19.4	1.9	0.9	chr2	178208716	178208732	(63984797)	+	(TTCCC)n	Simple_repeat	3	107	(0)	2168739
2315	24.3	11.3	6.8	chr2	178208733	178209857	(63983672)	C	HAL1	LINE/L1	(710)	1797	615	2168740
13	16.2	0.0	0.0	chr2	181656652	181656679	(60536850)	+	G-rich	Low_complexity	1	28	(0)	2172979
16	0.0	4.3	0.0	chr2	181891558	181891580	(60301949)	+	(GGA)n	Simple_repeat	1	24	(0)	2173260
17	18.6	3.3	4.8	chr2	181891634	181891693	(60301836)	+	(GCCGC)n	Simple_repeat	1	62	(0)	2173261
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
25	26.4	0.0	4.4	chr2	181891943	181891962	(60301567)	+	(CCCTCC)n	Simple_repeat	2	90	(0)	2173263
14	30.1	1.6	1.6	chr2	182716123	182716185	(59477344)	+	(CGCCAC)n	Simple_repeat	1	64	(0)	2174385
2018	11.8	0.4	0.7	chr2	183009092	183009361	(59184168)	+	AluSq2	SINE/Alu	1	269	(44)	2174771
16	6.6	2.8	5.4	chr2	183009365	183009405	(59184124)	+	(GGGAGG)n	Simple_repeat	1	39	(0)	2174772
64	0.0	0.0	1.6	chr2	183009417	183009478	(59184051)	+	(GGAA)n	Simple_repeat	1	62	(0)	2174773
20	3.7	0.0	0.0	chr2	183009479	183009506	(59184023)	+	(CAAG)n	Simple_repeat	1	28	(0)	2174774
183	28.3	5.3	10.9	chr2	183009554	183009613	(59183916)	C	MIR	SINE/MIR	(48)	214	161	2174775
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
26	0.0	0.0	0.0	chr2	183038418	183038442	(59155087)	+	(GGC)n	Simple_repeat	1	25	(0)	2174824
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
24	22.8	0.0	0.0	chr2	186694300	186694356	(55499173)	+	(CAG)n	Simple_repeat	1	57	(0)	2179449
14	14.9	2.4	4.8	chr2	188291953	188291993	(53901536)	+	G-rich	Low_complexity	1	42	(0)	2181474
9839	16.1	1.0	0.7	chr2	189942487	189944131	(52249398)	+	MSTA-int	LTR/ERVL-MaLR	1	1650	(1)	2183614
13	21.1	0.0	4.8	chr2	190180786	190180827	(52012702)	+	(GCG)n	Simple_repeat	1	42	(0)	2183963
21	4.1	0.0	0.0	chr2	190648514	190648538	(51544991)	+	(T)n	Simple_repeat	1	25	(0)	2184671
17	23.9	2.0	0.0	chr2	190648836	190648885	(51544644)	+	(GCCCCC)n	Simple_repeat	1	51	(0)	2184672
30	13.1	0.0	4.7	chr2	190649073	190649136	(51544393)	+	(CGC)n	Simple_repeat	1	64	(0)	2184673
239	20.7	1.7	0.0	chr2	191422427	191422484	(50771045)	C	MER113A	DNA/hAT-Charlie	(250)	64	6	2185820
790	17.6	13.6	1.9	chr2	191423036	191423102	(50770427)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	162	2185821
2452	6.0	0.0	0.3	chr2	195883166	195883447	(46310082)	+	AluY	SINE/Alu	1	281	(30)	2191612
483	30.8	4.2	1.1	chr2	195883493	195883679	(46309850)	+	MIRc	SINE/MIR	71	263	(5)	2191613
21561	13.7	2.7	3.2	chr2	195975035	195980099	(46213430)	+	L1MA3	LINE/L1	17	5032	(2533)	2191729
2462	12.6	0.5	1.1	chr2	195980100	195980475	(46213054)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	2191730
44	26.5	1.6	5.2	chr2	196171682	196171870	(46021659)	+	G-rich	Low_complexity	1	192	(0)	2192007
1955	15.5	0.0	1.3	chr2	196642735	196643043	(45550486)	C	AluJr4	SINE/Alu	(7)	305	1	2192726
1326	13.2	0.0	0.5	chr2	196816507	196816712	(45376817)	+	L1PA16	LINE/L1	5958	6162	(4)	2192943
3204	19.2	10.2	4.0	chr2	196816827	196817230	(45376299)	C	MER11A	LTR/ERVK	(4)	1232	752	2192944
2506	7.6	0.0	0.3	chr2	196817231	196817534	(45375995)	C	AluYm1	SINE/Alu	(8)	303	1	2192945
23	21.9	0.0	0.0	chr2	196926620	196926672	(45266857)	+	(GCC)n	Simple_repeat	1	53	(0)	2193088
13	15.0	9.1	3.3	chr2	196926746	196926800	(45266729)	+	(GCGCCT)n	Simple_repeat	1	60	(0)	2193089
27	0.0	0.0	0.0	chr2	196927410	196927438	(45266091)	+	(A)n	Simple_repeat	1	29	(0)	2193090
2317	10.2	0.3	5.6	chr2	197265225	197265546	(44927983)	C	AluSz	SINE/Alu	(7)	305	1	2193669
374	34.0	2.7	2.7	chr2	197995675	197995895	(44197634)	+	Tigger12	DNA/TcMar-Tigger	67	287	(2188)	2194897
250	21.9	16.5	0.7	chr2	197995902	197996020	(44197509)	+	Tigger12	DNA/TcMar-Tigger	556	698	(36)	2194898
12	21.4	2.4	2.4	chr2	197996114	197996154	(44197375)	+	GA-rich	Low_complexity	1	42	(0)	2194899
15	9.4	5.6	2.6	chr2	199659288	199659323	(42534206)	+	(CCGAG)n	Simple_repeat	1	38	(0)	2197159
284	32.4	10.2	2.8	chr2	200225243	200225496	(41968033)	+	MLT1O	LTR/ERVL-MaLR	252	526	(16)	2198002
14	19.9	2.4	2.3	chr2	200306622	200306663	(41886866)	+	(GGCG)n	Simple_repeat	1	43	(0)	2198136
22	24.2	2.6	6.7	chr2	200306780	200306895	(41886634)	+	(CGGCCC)n	Simple_repeat	1	119	(0)	2198137
11	24.9	2.0	3.9	chr2	200307261	200307311	(41886218)	+	(CGCCCG)n	Simple_repeat	1	52	(0)	2198138
14	18.0	8.0	0.0	chr2	200526339	200526388	(41667141)	+	(TCCGGCC)n	Simple_repeat	1	54	(0)	2198471
34	6.5	0.0	0.0	chr2	202033744	202033808	(40159721)	+	(GGGAG)n	Simple_repeat	1	65	(0)	2201078
28	0.0	0.0	3.2	chr2	202033874	202033904	(40159625)	+	(CGG)n	Simple_repeat	1	31	(0)	2201079
24	24.3	1.8	6.3	chr2	202034104	202034219	(40159310)	+	(GCG)n	Simple_repeat	1	110	(0)	2201080
14	23.1	0.0	4.1	chr2	202635899	202635947	(39557582)	+	G-rich	Low_complexity	1	49	(0)	2202415
12	29.1	3.8	3.6	chr2	202635947	202635975	(39557554)	+	(GCCCC)n	Simple_repeat	1	57	(26)	2202416
14	22.1	0.0	2.5	chr2	202635976	202636015	(39557514)	+	(CCCG)n	Simple_repeat	1	40	(0)	2202417
12	29.1	3.8	3.6	chr2	202636016	202636026	(39557503)	+	(GCCCC)n	Simple_repeat	58	83	(0)	2202416
2077	13.3	0.0	3.7	chr2	202732859	202732896	(39460633)	+	AluSz	SINE/Alu	283	311	(1)	2202608
2463	18.9	6.7	6.2	chr2	202732897	202732971	(39460558)	+	L1MB8	LINE/L1	5874	5972	(206)	2202602
7103	6.8	15.2	4.8	chr2	202732972	202734099	(39459430)	C	MER11A	LTR/ERVK	(0)	1266	1	2202610
13	6.9	2.8	8.1	chr2	202872198	202872233	(39321296)	+	(CATATC)n	Simple_repeat	1	37	(0)	2202837
13	20.8	0.0	0.0	chr2	203328209	203328241	(38865288)	+	G-rich	Low_complexity	1	33	(0)	2203790
12	5.6	0.0	0.0	chr2	203328406	203328424	(38865105)	+	(CCG)n	Simple_repeat	1	19	(0)	2203791
17	18.9	0.0	0.0	chr2	203328488	203328523	(38865006)	+	GA-rich	Low_complexity	1	36	(0)	2203792
13	17.7	2.5	2.4	chr2	203328673	203328712	(38864817)	+	(GCCGCGG)n	Simple_repeat	1	41	(0)	2203793
12	20.0	6.2	2.0	chr2	203328871	203328918	(38864611)	+	(CCCGCC)n	Simple_repeat	1	51	(0)	2203794
259	22.5	0.7	5.9	chr2	204443084	204443180	(37750349)	C	MLT1L	LTR/ERVL-MaLR	(340)	270	112	2205626
1659	14.4	0.0	0.7	chr2	204443367	204443660	(37749869)	+	L1MA8	LINE/L1	5996	6287	(4)	2205627
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
29	7.2	2.3	0.0	chr2	204545612	204545655	(37647874)	+	(GCCAGG)n	Simple_repeat	1	45	(0)	2205786
326	23.5	13.1	4.0	chr2	204545685	204545808	(37647721)	C	L1MDb	LINE/L1	(5718)	691	555	2205787
1924	14.8	1.3	0.7	chr2	205878269	205878565	(36314964)	+	AluJo	SINE/Alu	1	299	(13)	2207540
304	27.2	6.8	2.9	chr2	205878751	205878890	(36314639)	C	L3	LINE/CR1	(2)	4097	3952	2207541
1561	21.5	12.0	3.4	chr2	205878933	205879409	(36314120)	+	MLT2B1	LTR/ERVL	21	549	(6)	2207542
6163	5.4	3.1	0.3	chr2	205939168	205939925	(36253604)	+	LTR17	LTR/ERV1	1	780	(0)	2207652
290	27.1	10.3	3.7	chr2	206112751	206112931	(36080598)	+	MLT1J	LTR/ERVL-MaLR	58	221	(223)	2208017
1427	23.9	1.1	0.0	chr2	206112967	206113250	(36080279)	C	LTR16A	LTR/ERVL	(0)	451	165	2208018
1571	23.6	9.3	11.2	chr2	206113280	206113851	(36079678)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	2208019
673	25.0	6.3	1.1	chr2	206989230	206989512	(35204017)	C	LTR16A1	LTR/ERVL	(0)	456	158	2209403
16	24.0	0.0	0.0	chr2	207166018	207166052	(35027477)	+	(C)n	Simple_repeat	1	35	(0)	2209618
15	27.2	0.0	0.0	chr2	207166071	207166112	(35027417)	+	(TCC)n	Simple_repeat	1	42	(0)	2209619
20	17.4	5.7	4.0	chr2	207166886	207166895	(35026634)	+	(CCG)n	Simple_repeat	1	82	(0)	2209620
15	19.6	5.6	5.3	chr2	207166896	207166966	(35026563)	+	(CGCC)n	Simple_repeat	1	75	(0)	2209621
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
30	3.1	0.0	0.0	chr2	207530383	207530415	(34663114)	+	(GGCGGCG)n	Simple_repeat	1	33	(0)	2210182
1187	9.4	0.6	2.4	chr2	207626385	207626587	(34566942)	C	AluSx	SINE/Alu	(0)	312	127	2210338
19	0.0	0.0	0.0	chr2	209424083	209424106	(32769423)	+	(GCA)n	Simple_repeat	1	24	(0)	2213017
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
18	23.3	2.0	0.0	chr2	209772220	209772269	(32421260)	+	(GCC)n	Simple_repeat	1	51	(0)	2213451
15	10.0	0.0	0.0	chr2	209772333	209772354	(32421175)	+	(AT)n	Simple_repeat	1	22	(0)	2213452
1075	29.0	8.3	1.6	chr2	211564513	211565020	(30628509)	+	HAL1	LINE/L1	1536	2080	(427)	2215768
19	18.8	2.0	2.0	chr2	214809689	214809738	(27383791)	+	(GGCGG)n	Simple_repeat	1	51	(0)	2220126
506	27.8	7.8	0.0	chr2	216546396	216546571	(25646958)	+	L1ME4a	LINE/L1	5699	5889	(235)	2222953
23	15.1	1.9	1.9	chr2	216690871	216690923	(25502606)	+	G-rich	Low_complexity	1	54	(0)	2223252
1604	21.0	7.7	2.8	chr2	216760511	216760932	(25432597)	C	MER31B	LTR/ERV1	(22)	444	1	2223377
133	17.1	0.4	3.2	chr2	216781084	216781362	(25412167)	+	(TCCCC)n	Simple_repeat	1	280	(0)	2223414
1718	15.9	0.4	0.0	chr2	216781374	216781637	(25411892)	C	AluJo	SINE/Alu	(38)	274	10	2223415
6838	9.2	15.1	2.2	chr2	217560971	217562069	(24631460)	+	MER11A	LTR/ERVK	1	1266	(0)	2224593
2721	9.5	2.7	8.8	chr2	217562070	217562250	(24631279)	+	MER4D1	LTR/ERV1	730	898	(2)	2224592
373	24.6	13.1	0.8	chr2	218398217	218398343	(23795186)	+	MIRb	SINE/MIR	54	198	(70)	2226035
17	26.1	1.6	1.6	chr2	218398557	218398617	(23794912)	+	(CCCCT)n	Simple_repeat	1	62	(0)	2226036
14	23.7	6.8	0.0	chr2	218398637	218398695	(23794834)	+	(GCGCC)n	Simple_repeat	1	63	(0)	2226037
17	22.8	0.0	0.0	chr2	218399981	218400016	(23793513)	+	(C)n	Simple_repeat	1	36	(0)	2226038
14	7.6	7.1	0.0	chr2	218400235	218400262	(23793267)	+	(GCC)n	Simple_repeat	1	30	(0)	2226039
14	7.2	0.0	8.6	chr2	218406515	218406549	(23786980)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2226047
26	25.1	3.3	1.1	chr2	218883498	218883588	(23309941)	+	(CCGCC)n	Simple_repeat	1	94	(0)	2226971
77	30.7	4.1	1.9	chr2	219294198	219294561	(22898968)	+	GA-rich	Low_complexity	1	379	(0)	2227661
11	19.1	5.9	3.7	chr2	219294717	219294767	(22898762)	+	G-rich	Low_complexity	1	54	(0)	2227662
12	12.6	2.5	7.3	chr2	219294869	219294908	(22898621)	+	(AGGCCC)n	Simple_repeat	1	41	(0)	2227663
388	25.8	7.8	13.1	chr2	219439275	219439519	(22754010)	C	L2a	LINE/L2	(17)	3409	3179	2227953
20	24.0	2.4	4.6	chr2	219571262	219571346	(22622183)	+	G-rich	Low_complexity	1	87	(0)	2228142
14	0.0	0.0	0.0	chr2	219571417	219571434	(22622095)	+	(GCG)n	Simple_repeat	1	18	(0)	2228143
11	27.6	2.0	2.0	chr2	219571756	219571805	(22621724)	+	(CCTGCC)n	Simple_repeat	1	51	(0)	2228144
12	10.8	9.3	2.1	chr2	219794195	219794229	(22399300)	+	G-rich	Low_complexity	1	38	(0)	2228519
1811	20.2	3.0	1.4	chr2	219794230	219794586	(22398943)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	2228520
12	25.2	2.0	3.9	chr2	222320012	222320062	(19873467)	+	(GCT)n	Simple_repeat	1	52	(0)	2232407
16	18.9	2.9	7.0	chr2	222320227	222320295	(19873234)	+	(CGTCCC)n	Simple_repeat	1	71	(0)	2232408
24	12.1	2.2	0.0	chr2	222866739	222866744	(19326785)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2233372
30	5.5	0.0	0.0	chr2	222866745	222866782	(19326747)	+	(C)n	Simple_repeat	1	38	(0)	2233373
2500	11.6	0.0	0.0	chr2	222866823	222867132	(19326397)	C	AluSg	SINE/Alu	(0)	310	1	2233374
12	12.0	3.7	0.0	chr2	223041906	223041932	(19151597)	+	(TTTTA)n	Simple_repeat	1	28	(0)	2233625
122	17.3	0.4	1.6	chr2	223041926	223041939	(19151590)	+	(TTTC)n	Simple_repeat	1	14	(0)	2233626
41	0.0	2.4	0.0	chr2	223041940	223041980	(19151549)	+	(CCTT)n	Simple_repeat	1	42	(0)	2233627
333	32.7	2.8	4.2	chr2	223837000	223837216	(18356313)	+	L2a	LINE/L2	3213	3426	(0)	2234957
12	20.9	0.0	7.8	chr2	223837325	223837375	(18356154)	+	(GGCCC)n	Simple_repeat	1	51	(0)	2234958
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
36	2.7	0.0	0.0	chr2	224585163	224585200	(17608329)	+	(GCG)n	Simple_repeat	1	38	(0)	2236169
13	5.3	0.0	0.0	chr2	224585308	224585327	(17608202)	+	(GGC)n	Simple_repeat	1	20	(0)	2236170
22	9.4	0.0	0.0	chr2	224585356	224585389	(17608140)	+	(TCC)n	Simple_repeat	1	34	(0)	2236171
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
14	10.8	2.0	10.0	chr2	224585798	224585846	(17607683)	+	G-rich	Low_complexity	1	50	(0)	2236173
16	0.0	0.0	0.0	chr2	226799140	226799157	(15394372)	+	(GC)n	Simple_repeat	1	18	(0)	2239465
13	22.4	0.0	4.4	chr2	226799274	226799318	(15394211)	+	(CGCCACC)n	Simple_repeat	1	45	(0)	2239466
33	7.2	0.0	0.0	chr2	226799349	226799392	(15394137)	+	(GCT)n	Simple_repeat	1	44	(0)	2239467
20	3.3	3.0	2.9	chr2	226799648	226799680	(15393849)	+	(CTC)n	Simple_repeat	1	34	(0)	2239468
317	30.7	14.9	6.8	chr2	227164586	227164910	(15028619)	+	L1M4b	LINE/L1	317	672	(6195)	2240010
26	21.8	7.8	0.9	chr2	230712975	230713077	(11480452)	+	(CCGCAG)n	Simple_repeat	1	111	(0)	2245575
12	22.0	4.8	0.0	chr2	231056825	231056866	(11136663)	+	G-rich	Low_complexity	1	44	(0)	2246157
481	36.2	6.7	0.8	chr2	231262809	231263045	(10930484)	+	MIRb	SINE/MIR	14	265	(3)	2246541
1686	16.9	4.0	5.8	chr2	231431063	231431440	(10762089)	C	HERVH-int	LTR/ERV1	(1804)	5909	5539	2246849
2868	17.6	1.6	2.1	chr2	231431441	231432394	(10761135)	C	HERVH-int	LTR/ERV1	(3270)	4443	3556	2246849
257	8.3	0.0	0.0	chr2	231530642	231530677	(10662852)	C	MIRc	SINE/MIR	(120)	148	113	2247061
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
527	21.1	21.3	3.6	chr2	231785902	231786093	(10407436)	+	MIRb	SINE/MIR	26	260	(8)	2247628
340	31.9	7.3	5.0	chr2	231926618	231926858	(10266671)	C	MIRb	SINE/MIR	(7)	261	15	2247912
1018	26.8	7.5	4.8	chr2	232168328	232168727	(10024802)	C	Charlie7	DNA/hAT-Charlie	(2057)	555	144	2248284
354	26.8	13.7	3.5	chr2	232168910	232169091	(10024438)	C	L2a	LINE/L2	(0)	3426	3172	2248285
26	15.7	1.5	6.1	chr2	232169301	232169365	(10024164)	+	(AT)n	Simple_repeat	1	66	(0)	2248286
16	26.9	0.0	0.0	chr2	232487653	232487697	(9705832)	+	(GGC)n	Simple_repeat	1	45	(0)	2248734
1246	10.8	5.5	11.7	chr2	232539010	232539240	(9654289)	+	AluSz	SINE/Alu	40	255	(57)	2248819
399	20.1	3.2	1.1	chr2	232551134	232551224	(9642305)	+	MIRb	SINE/MIR	104	202	(66)	2248838
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
31	21.4	5.0	3.9	chr2	234064086	234064206	(8129323)	+	(TCCCCTC)n	Simple_repeat	1	127	(0)	2251316
269	31.8	4.9	5.3	chr2	234064244	234064449	(8129080)	C	MLT1K	LTR/ERVL-MaLR	(160)	435	231	2251317
20	6.9	0.0	0.0	chr2	234496974	234497004	(7696525)	+	(GCTCCC)n	Simple_repeat	1	31	(0)	2252077
38	27.5	1.7	5.0	chr2	234497099	234497275	(7696254)	+	(CCCCG)n	Simple_repeat	1	180	(0)	2252078
1106	26.6	11.4	9.2	chr2	236806726	236806959	(5386570)	+	HAL1ME	LINE/L1	1269	1488	(977)	2255529
2350	9.8	0.0	0.0	chr2	236806960	236807255	(5386274)	C	AluY	SINE/Alu	(15)	296	1	2255530
91	15.5	3.6	6.9	chr2	237282543	237282822	(4910707)	+	GA-rich	Low_complexity	1	290	(0)	2256173
13	22.9	2.1	4.2	chr2	237291388	237291434	(4902095)	+	(TTCTC)n	Simple_repeat	1	48	(0)	2256186
6326	16.7	5.5	3.6	chr2	237788371	237789094	(4404435)	C	Charlie5	DNA/hAT-Charlie	(1049)	1575	837	2256837
1782	17.2	1.0	0.7	chr2	237789095	237789385	(4404144)	+	AluJb	SINE/Alu	2	293	(19)	2256841
90	2.2	1.1	0.0	chr2	237923933	237924024	(4269505)	+	(TCTTT)n	Simple_repeat	1	93	(0)	2257054
18	23.5	2.1	0.0	chr2	237924025	237924072	(4269457)	+	(CTTTC)n	Simple_repeat	1	49	(0)	2257055
13	12.3	3.8	9.1	chr2	238158794	238158846	(4034683)	+	(CCCTGC)n	Simple_repeat	1	55	(0)	2257429
23	21.8	0.0	5.3	chr2	238158847	238158865	(4034664)	+	(CTCCCC)n	Simple_repeat	5	76	(0)	2257430
15	14.9	0.0	7.0	chr2	238158885	238158927	(4034602)	+	G-rich	Low_complexity	1	43	(0)	2257431
18	19.3	2.4	9.2	chr2	238158997	238159081	(4034448)	+	(CCG)n	Simple_repeat	1	87	(0)	2257432
45548	8.4	1.0	0.8	chr2	238205829	238211673	(3981856)	C	HERVFH19-int	LTR/ERV1	(179)	7540	1676	2257497
813	32.5	13.6	6.3	chr2	238234660	238234826	(3958703)	C	L2	LINE/L2	(627)	2792	2647	2257543
2367	7.2	0.0	0.3	chr2	238234827	238235130	(3958399)	+	AluSc8	SINE/Alu	2	304	(7)	2257544
5707	7.1	2.8	0.3	chr2	238513823	238514575	(3678954)	+	LTR17	LTR/ERV1	1	773	(7)	2257922
2212	22.6	2.6	1.9	chr2	238859230	238859563	(3333966)	+	L1MB5	LINE/L1	5826	6159	(15)	2258323
669	31.9	0.8	0.0	chr2	238980213	238980453	(3213076)	C	L1ME3B	LINE/L1	(1188)	4958	4716	2258453
23	17.4	0.0	0.0	chr2	238980475	238980514	(3213015)	+	(T)n	Simple_repeat	1	40	(0)	2258456
2496	4.3	0.0	6.6	chr2	238980515	238980715	(3212814)	C	LTR17	LTR/ERV1	(454)	326	148	2258457
56	12.6	0.0	2.0	chr2	239905793	239905891	(2287638)	+	(GGGGA)n	Simple_repeat	1	99	(0)	2259457
328	32.6	3.1	1.9	chr2	239919341	239919534	(2273995)	+	L2a	LINE/L2	3179	3396	(30)	2259471
2079	21.8	6.0	5.4	chr2	240180146	240180625	(2012904)	+	MLT1F2	LTR/ERVL-MaLR	17	504	(56)	2259780
5843	14.2	2.1	1.1	chr2	240265274	240267135	(1926394)	C	L1PA16	LINE/L1	(3)	6500	4622	2259868
22	20.2	3.3	6.5	chr2	240435730	240435819	(1757710)	+	(CCG)n	Simple_repeat	1	93	(0)	2260045
2344	17.8	4.0	0.5	chr2	240498647	240499053	(1694476)	+	MSTB	LTR/ERVL-MaLR	3	424	(2)	2260097
29	29.1	1.3	5.2	chr2	241218397	241218547	(974982)	+	(GGCGG)n	Simple_repeat	1	153	(0)	2260835
3716	9.4	2.2	0.4	chr2	241218630	241219121	(974408)	C	LTR2C	LTR/ERV1	(0)	501	1	2260836
32	20.4	2.5	6.4	chr2	241610789	241610910	(582619)	+	(GGACAG)n	Simple_repeat	1	125	(0)	2261426
19	19.0	0.0	6.6	chr2	241701857	241701917	(491612)	+	(GCCCGCC)n	Simple_repeat	1	61	(0)	2261583
606	24.2	9.2	13.1	chr2	241887729	241888218	(305311)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	12	2261821
209	37.4	6.4	6.7	chr20	190359	190656	(64253511)	+	L2c	LINE/L2	3025	3321	(66)	2262359
18	8.7	0.0	0.0	chr20	190667	190691	(64253476)	+	(T)n	Simple_repeat	1	25	(0)	2262360
2638	4.0	0.0	0.0	chr20	190692	191017	(64253150)	C	LTR17	LTR/ERV1	(454)	326	1	2262361
400	31.8	7.5	0.7	chr20	291498	291785	(64152382)	+	L2-3_Crp	LINE/L2	745	1053	(1043)	2262574
504	22.7	25.5	0.0	chr20	291786	292054	(64152113)	+	L2	LINE/L2	2298	2658	(761)	2262572
366	19.6	4.0	10.1	chr20	298833	298991	(64145176)	C	Tigger15a	DNA/TcMar-Tigger	(73)	642	494	2262588
12	22.1	0.0	0.0	chr20	299092	299123	(64145044)	+	(TCCC)n	Simple_repeat	1	32	(0)	2262589
302	24.0	11.1	11.1	chr20	299136	299243	(64144924)	+	L2b	LINE/L2	3272	3379	(8)	2262590
795	23.5	7.0	1.4	chr20	299264	299479	(64144688)	C	Tigger15a	DNA/TcMar-Tigger	(405)	310	82	2262588
14	33.7	1.4	0.0	chr20	324166	324235	(64119932)	+	(CCCCGCC)n	Simple_repeat	1	71	(0)	2262661
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
12	19.3	4.7	2.2	chr20	710023	710065	(63734102)	+	(CCCGCG)n	Simple_repeat	1	45	(0)	2263568
15	18.5	4.7	0.0	chr20	710361	710369	(63733798)	+	(CAGCCCC)n	Simple_repeat	1	43	(0)	2263569
16	21.7	0.0	0.0	chr20	710370	710401	(63733766)	+	(C)n	Simple_repeat	1	32	(0)	2263570
13	19.2	2.2	4.3	chr20	710617	710661	(63733506)	+	G-rich	Low_complexity	1	46	(0)	2263571
13	27.3	3.4	1.6	chr20	728423	728481	(63715686)	+	(GGCGC)n	Simple_repeat	1	61	(0)	2263618
374	23.5	14.3	0.0	chr20	833173	833304	(63610863)	C	L1M5	LINE/L1	(347)	5777	5624	2263835
258	28.1	0.0	0.9	chr20	833352	833435	(63610732)	C	MIR3	SINE/MIR	(149)	119	40	2263836
1654	19.1	10.8	3.5	chr20	1821770	1822796	(62621371)	+	L1MB4	LINE/L1	20	1523	(5084)	2265667
384	19.2	20.2	0.0	chr20	2624484	2624582	(61819585)	C	LTR16C	LTR/ERVL	(2)	487	364	2267306
398	23.1	10.0	4.1	chr20	2624599	2624720	(61819447)	C	LTR16C	LTR/ERVL	(186)	303	174	2267306
30	22.7	3.2	4.7	chr20	3407640	3407762	(61036405)	+	(GGCGCG)n	Simple_repeat	1	127	(0)	2268792
19	23.3	3.3	0.0	chr20	3407968	3408027	(61036140)	+	(CCCGG)n	Simple_repeat	1	62	(0)	2268793
602	29.2	8.2	3.0	chr20	3787034	3787404	(60656763)	C	L1ME4a	LINE/L1	(0)	6124	5733	2269489
184	33.1	3.7	5.8	chr20	4148270	4148407	(60295760)	C	L2c	LINE/L2	(219)	3168	3034	2270250
15	19.6	3.5	5.0	chr20	4148767	4148824	(60295343)	+	(GCGGA)n	Simple_repeat	1	60	(0)	2270251
14	11.8	0.0	10.9	chr20	4148877	4148922	(60295245)	+	GA-rich	Low_complexity	1	46	(0)	2270252
2061	10.8	0.7	1.1	chr20	4655155	4655460	(59788707)	C	AluSx	SINE/Alu	(0)	312	6	2271088
1269	24.9	3.4	5.7	chr20	4655690	4655874	(59788293)	+	MSTB2	LTR/ERVL-MaLR	13	190	(267)	2271089
74	9.0	3.9	0.0	chr20	4655875	4656004	(59788163)	+	(TA)n	Simple_repeat	1	135	(0)	2271090
2630	20.8	6.8	16.1	chr20	5140957	5141929	(59302238)	+	MER21A	LTR/ERVL	39	914	(17)	2272107
13	15.3	6.4	4.0	chr20	6054201	6054247	(58389920)	+	(AGTGC)n	Simple_repeat	1	50	(0)	2273773
12	10.7	6.7	0.0	chr20	9068624	9068653	(55375514)	+	(CCCAGC)n	Simple_repeat	1	32	(0)	2278348
13	17.1	2.3	4.5	chr20	9068654	9068659	(55375508)	+	(CGGCC)n	Simple_repeat	20	44	(0)	2278347
28	24.1	0.0	0.0	chr20	9069086	9069146	(55375021)	+	(CA)n	Simple_repeat	1	61	(0)	2278349
565	17.8	0.0	0.0	chr20	9144552	9144641	(55299526)	+	FLAM_C	SINE/Alu	42	131	(12)	2278457
945	26.1	5.3	5.6	chr20	10242167	10242560	(54201607)	C	LTR16A1	LTR/ERVL	(63)	393	1	2280215
24	27.4	2.1	3.1	chr20	10673536	10673629	(53770538)	+	(CGC)n	Simple_repeat	1	96	(0)	2280873
21	14.5	0.0	0.0	chr20	13221797	13221834	(51222333)	+	(GCT)n	Simple_repeat	1	38	(0)	2284567
22	21.3	6.6	0.0	chr20	13995559	13995634	(50448533)	+	(GGCGAGC)n	Simple_repeat	1	81	(0)	2285791
307	31.2	9.0	2.1	chr20	13995814	13995957	(50448210)	C	L1MDb	LINE/L1	(5714)	695	541	2285792
716	22.6	1.2	1.2	chr20	14612574	14612743	(49831424)	+	ORSL-2a	DNA/hAT-Tip100	165	334	(8)	2286672
27	23.3	6.8	2.8	chr20	17569455	17569586	(46874581)	+	(CCCTCA)n	Simple_repeat	1	141	(0)	2291130
2197	18.8	12.1	1.4	chr20	17887887	17888373	(46555794)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	2291678
2368	9.9	0.7	0.0	chr20	17974062	17974364	(46469803)	C	AluSx	SINE/Alu	(7)	305	1	2291826
795	21.6	1.1	0.6	chr20	20930382	20930553	(43513614)	+	LTR16A2	LTR/ERVL	304	476	(19)	2296327
2246	10.6	0.0	3.9	chr20	21207704	21208014	(43236153)	C	AluSx3	SINE/Alu	(12)	299	1	2296762
2682	5.4	0.3	0.0	chr20	21208422	21208715	(43235452)	+	AluY	SINE/Alu	1	295	(16)	2296763
2109	13.3	10.8	3.5	chr20	21422173	21422568	(43021599)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2297065
10968	11.3	1.0	0.2	chr20	21422603	21424214	(43019953)	C	MSTA-int	LTR/ERVL-MaLR	(5)	1626	1	2297065
44	0.0	0.0	0.0	chr20	21506666	21506703	(42937464)	+	(GT)n	Simple_repeat	1	38	(0)	2297195
24	20.9	2.2	4.2	chr20	21522638	21522780	(42921387)	+	G-rich	Low_complexity	1	140	(0)	2297206
897	21.4	14.8	5.3	chr20	21622876	21623497	(42820670)	C	LTR50	LTR/ERVL	(16)	779	3	2297384
17	16.5	3.9	3.8	chr20	23035569	23035619	(41408548)	+	(CGG)n	Simple_repeat	1	53	(0)	2299159
3327	16.3	7.6	0.8	chr20	23360500	23361161	(41083006)	C	MER67C	LTR/ERV1	(0)	711	1	2299612
659	23.5	17.3	0.4	chr20	23361191	23361459	(41082708)	C	MER110A	LTR/ERV1	(1)	467	144	2299613
113	31.0	3.1	4.4	chr20	23638051	23638751	(40805416)	+	(CCCTC)n	Simple_repeat	1	723	(0)	2299953
517	32.1	11.4	0.9	chr20	24340021	24340445	(40103722)	+	LTR16D2	LTR/ERVL	98	572	(0)	2300781
365	21.4	5.9	0.0	chr20	25091216	25091327	(39352840)	+	LTR16C	LTR/ERVL	370	488	(1)	2301696
193	29.3	6.6	0.0	chr20	25091329	25091427	(39352740)	+	L2b	LINE/L2	3256	3361	(14)	2301697
386	26.6	18.8	4.0	chr20	25403272	25403657	(39040510)	+	L2a	LINE/L2	2936	3393	(33)	2302105
4441	16.1	5.2	3.6	chr20	25403658	25404535	(39039632)	+	MER4D	LTR/ERV1	1	892	(11)	2302112
1746	21.7	8.1	1.0	chr20	25848696	25849179	(38594988)	C	MER90a	LTR/ERV1	(0)	614	94	2302837
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
18	23.3	0.0	0.0	chr20	26209084	26209123	(38235044)	+	(C)n	Simple_repeat	1	40	(0)	2303449
406	18.5	1.9	6.8	chr20	26209717	26209878	(38234289)	C	FordPrefect	DNA/hAT-Tip100	(728)	955	802	2303450
36	7.7	3.6	0.0	chr20	29310541	29310596	(35133571)	+	(TC)n	Simple_repeat	1	58	(0)	2303973
971	24.5	0.0	8.6	chr20	29310601	29310890	(35133277)	C	L1PREC2	LINE/L1	(8)	6152	5888	2303974
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
16	20.9	0.0	0.0	chr20	30377144	30377176	(34066991)	+	(C)n	Simple_repeat	1	33	(0)	2304972
5501	9.7	4.4	1.4	chr20	30404192	30405254	(34038913)	+	SVA_D	Retroposon/SVA	3	870	(517)	2305007
4741	8.9	7.8	6.5	chr20	30405283	30406523	(34037644)	+	SVA_D	Retroposon/SVA	433	1376	(10)	2305007
1005	23.2	0.7	4.6	chr20	30505639	30505916	(33938251)	C	L1PREC2	LINE/L1	(8)	6152	5888	2305072
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
390	26.1	2.1	2.1	chr20	30570298	30570442	(33873725)	+	MIR	SINE/MIR	62	206	(56)	2305201
23	0.0	0.0	7.7	chr20	30570620	30570662	(33873505)	+	(GTGGGG)n	Simple_repeat	1	39	(0)	2305202
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
13	15.2	0.0	3.2	chr20	30908367	30908397	(33535770)	+	(TCTT)n	Simple_repeat	1	31	(0)	2305589
879	24.7	0.8	9.0	chr20	30908526	30908814	(33535353)	+	L1PREC2	LINE/L1	5888	6152	(8)	2305590
1634	12.5	9.2	0.0	chr20	31634625	31634910	(32809257)	C	AluSz	SINE/Alu	(0)	312	1	2306476
1030	13.9	10.5	22.4	chr20	31689096	31689447	(32754720)	+	AluJr4	SINE/Alu	1	305	(7)	2306634
28	3.3	0.0	0.0	chr20	31880262	31880292	(32563875)	+	(TCCA)n	Simple_repeat	1	31	(0)	2307087
278	28.6	8.2	0.9	chr20	31880297	31880409	(32563758)	C	L2b	LINE/L2	(0)	3375	3254	2307088
2437	5.5	1.4	0.0	chr20	31880497	31880786	(32563381)	C	AluSc	SINE/Alu	(15)	294	1	2307089
474	27.9	1.1	8.0	chr20	32110413	32110611	(32333556)	C	MER5A	DNA/hAT-Charlie	(3)	186	2	2307692
19	17.7	0.0	2.5	chr20	32358330	32358369	(32085798)	+	(CA)n	Simple_repeat	1	40	(0)	2308298
50	26.2	3.6	4.7	chr20	32358520	32358766	(32085401)	+	(GCC)n	Simple_repeat	1	256	(0)	2308299
17	24.1	1.3	6.4	chr20	32584067	32584082	(31860085)	+	(CCCCGC)n	Simple_repeat	1	26	(39)	2308734
15	19.9	0.0	0.0	chr20	32584083	32584111	(31860056)	+	(C)n	Simple_repeat	1	29	(0)	2308735
291	33.0	1.4	8.0	chr20	32621303	32621458	(31822709)	C	MIRb	SINE/MIR	(101)	167	16	2308845
559	22.2	0.0	6.0	chr20	32642783	32642916	(31801251)	+	MIR	SINE/MIR	31	156	(106)	2308899
725	26.4	2.1	1.6	chr20	32643186	32643374	(31800793)	+	MIR	SINE/MIR	27	216	(46)	2308900
2286	10.7	1.9	1.0	chr20	33998846	33999153	(30445014)	+	AluSx1	SINE/Alu	2	312	(0)	2312108
237	28.4	13.8	6.6	chr20	33999154	33999314	(30444853)	C	L2b	LINE/L2	(772)	2647	2460	2312106
14	23.1	3.4	3.3	chr20	34676761	34676819	(29767348)	+	(CCCCCCG)n	Simple_repeat	1	61	(0)	2313589
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
24	9.5	4.4	0.0	chr20	34825668	34825712	(29618455)	+	(GGGA)n	Simple_repeat	1	47	(0)	2313908
327	24.2	14.1	0.8	chr20	34825914	34826042	(29618125)	+	MIRb	SINE/MIR	88	236	(32)	2313909
47	0.0	0.0	0.0	chr20	34845113	34845154	(29599013)	+	(CAC)n	Simple_repeat	1	42	(0)	2313957
235	28.2	0.2	0.0	chr20	34956053	34956125	(29488042)	C	MIRc	SINE/MIR	(130)	138	62	2314221
194	29.0	4.6	0.0	chr20	34956154	34956215	(29487952)	C	MIR3	SINE/MIR	(114)	94	30	2314221
590	9.7	0.0	0.0	chr20	35014077	35014148	(29430019)	C	AluSz	SINE/Alu	(238)	74	3	2314327
935	7.1	0.0	0.0	chr20	35014315	35014426	(29429741)	C	AluSg7	SINE/Alu	(9)	300	189	2314328
456	22.5	17.0	1.1	chr20	35014445	35014705	(29429462)	+	L1MEd	LINE/L1	702	1012	(6074)	2314325
207	17.8	4.2	0.0	chr20	35174465	35174509	(29269658)	+	MIR3	SINE/MIR	100	146	(62)	2314700
449	28.2	0.0	0.0	chr20	35174481	35174597	(29269570)	+	MIRc	SINE/MIR	121	237	(31)	2314701
48	2.0	2.0	0.0	chr20	35277769	35277819	(29166348)	+	(GGGCTG)n	Simple_repeat	1	52	(0)	2314926
26	0.0	0.0	0.0	chr20	35277856	35277880	(29166287)	+	(GGCTGG)n	Simple_repeat	1	25	(0)	2314927
13	12.1	5.0	4.8	chr20	35601756	35601795	(28842372)	+	G-rich	Low_complexity	1	42	(0)	2315649
1989	12.0	2.0	0.0	chr20	36119321	36119612	(28324555)	+	AluSz	SINE/Alu	1	298	(14)	2316894
45	17.6	2.0	1.9	chr20	36119616	36119717	(28324450)	+	GA-rich	Low_complexity	1	104	(0)	2316895
20	21.8	2.9	7.5	chr20	36306391	36306494	(28137673)	+	(CGGAGC)n	Simple_repeat	1	107	(0)	2317313
45	2.2	0.0	0.0	chr20	36307399	36307444	(28136723)	+	(CCCTCCAT)n	Simple_repeat	1	46	(0)	2317314
15	7.8	3.7	0.0	chr20	36835845	36835871	(27608296)	+	(CCG)n	Simple_repeat	1	28	(0)	2318572
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
1517	7.5	0.0	1.0	chr20	37128637	37128838	(27315329)	+	MER107	DNA/hAT-Charlie	1	200	(0)	2319293
347	28.8	5.8	4.0	chr20	37345617	37345768	(27098399)	+	MIR	SINE/MIR	108	262	(0)	2319798
28	18.4	0.9	9.7	chr20	37345991	37346102	(27098065)	+	(TCC)n	Simple_repeat	1	113	(0)	2319802
12	13.0	11.9	0.0	chr20	37346084	37346125	(27098042)	+	(CTCTCT)n	Simple_repeat	1	47	(0)	2319803
17	34.2	2.4	0.0	chr20	37346169	37346252	(27097915)	+	(CCGT)n	Simple_repeat	1	86	(0)	2319804
388	26.8	11.5	0.8	chr20	38060154	38060277	(26383890)	C	MIRb	SINE/MIR	(113)	155	17	2321337
13	18.8	0.0	0.0	chr20	38473102	38473132	(25971035)	+	(CCCTC)n	Simple_repeat	1	31	(0)	2322241
510	30.3	1.3	0.0	chr20	38825867	38826021	(25618146)	C	MER117	DNA/hAT-Charlie	(23)	174	18	2322958
7108	22.6	7.7	2.2	chr20	41585536	41585863	(22858304)	+	L1MEf	LINE/L1	4243	4575	(2366)	2327750
5714	10.1	3.2	0.8	chr20	41585864	41586624	(22857543)	+	LTR17	LTR/ERV1	1	780	(0)	2327752
11454	20.7	2.1	3.7	chr20	41597270	41599672	(22844495)	+	HERVIP10B3-int	LTR/ERV1	5238	7602	(1)	2327764
1644	18.6	22.1	1.4	chr20	41599676	41600107	(22844060)	+	LTR10B1	LTR/ERV1	1	547	(0)	2327764
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
454	21.1	6.3	8.6	chr20	41896730	41896973	(22547194)	C	MLT1H	LTR/ERVL-MaLR	(281)	208	4	2328295
3155	11.8	0.0	1.0	chr20	43418364	43418867	(21025300)	+	L1M2c	LINE/L1	2308	2806	(4760)	2331103
154	22.5	2.3	3.4	chr20	43418869	43419306	(21024861)	+	GA-rich	Low_complexity	1	448	(0)	2331107
3583	13.9	0.2	0.6	chr20	43479507	43480040	(20964127)	C	MER50	LTR/ERV1	(130)	604	73	2331271
13	25.9	6.2	0.0	chr20	43507589	43507652	(20936515)	+	(CCTGCGC)n	Simple_repeat	1	68	(0)	2331333
20	22.5	1.2	6.1	chr20	43507619	43507699	(20936468)	+	(GCCCGGC)n	Simple_repeat	1	82	(0)	2331334
12	25.1	4.3	0.0	chr20	43914681	43914727	(20529440)	+	(GGCCCGA)n	Simple_repeat	1	49	(0)	2332248
421	26.7	17.9	2.9	chr20	43934308	43934515	(20509652)	C	MIRb	SINE/MIR	(18)	250	5	2332292
43	7.7	0.0	0.0	chr20	43934787	43934841	(20509326)	+	(TG)n	Simple_repeat	1	55	(0)	2332293
379	29.1	0.8	0.8	chr20	44414128	44414245	(20029922)	+	MIRc	SINE/MIR	67	184	(84)	2333438
15	7.0	6.7	0.0	chr20	44414325	44414354	(20029813)	+	(CTCC)n	Simple_repeat	1	32	(0)	2333439
12	7.7	16.7	0.0	chr20	44414670	44414711	(20029456)	+	G-rich	Low_complexity	1	49	(0)	2333440
37	4.9	0.0	0.0	chr20	44810493	44810535	(19633632)	+	(GGC)n	Simple_repeat	1	43	(0)	2334402
33	26.3	0.0	0.0	chr20	44885718	44885803	(19558364)	+	(CCG)n	Simple_repeat	1	86	(0)	2334595
2332	8.2	0.3	0.0	chr20	45910342	45910633	(18533534)	+	AluSz	SINE/Alu	9	301	(11)	2336528
14	24.4	2.0	2.0	chr20	45911094	45911143	(18533024)	+	(GCCCC)n	Simple_repeat	1	51	(0)	2336529
699	23.4	13.6	1.6	chr20	46312966	46313152	(18131015)	+	MIR	SINE/MIR	25	237	(25)	2337429
183	17.1	5.4	0.0	chr20	46362125	46362159	(18082008)	C	L3	LINE/CR1	(13)	4086	4050	2337532
211	36.6	1.2	0.0	chr20	46362161	46362242	(18081925)	C	L2c	LINE/L2	(7)	3380	3298	2337533
522	23.7	6.9	0.7	chr20	46362436	46362571	(18081596)	+	MIRb	SINE/MIR	6	150	(118)	2337534
189	26.3	2.6	5.0	chr20	46894379	46894458	(17549709)	+	X6A_LINE	LINE/CR1	84	161	(919)	2338724
2080	18.8	7.4	0.9	chr20	47034680	47035109	(17409058)	C	MLT1C	LTR/ERVL-MaLR	(7)	460	1	2339052
2082	11.0	2.9	0.0	chr20	47225279	47225550	(17218617)	+	AluSq2	SINE/Alu	1	280	(33)	2339523
53	3.4	1.6	0.0	chr20	47225555	47225615	(17218552)	+	(AAGGGAGGGG)n	Simple_repeat	1	62	(0)	2339524
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
16	18.3	2.2	2.2	chr20	47502034	47502078	(16942089)	+	(AGGCGG)n	Simple_repeat	1	46	(0)	2340297
468	17.4	4.2	5.2	chr20	47524385	47524481	(16919686)	C	HUERS-P3-int	LTR/ERV1	(7322)	96	1	2340342
1207	14.6	0.5	6.1	chr20	47524482	47524693	(16919474)	C	LTR9B	LTR/ERV1	(0)	644	445	2340342
1791	10.2	4.5	12.1	chr20	47524755	47524932	(16919235)	C	AluSx	SINE/Alu	(24)	288	135	2340343
9251	2.5	0.4	26.4	chr20	47524933	47526808	(16917359)	C	SVA_D	Retroposon/SVA	(0)	1386	2	2340344
84	6.6	0.7	4.9	chr20	47541321	47541462	(16902705)	+	(CCCCT)n	Simple_repeat	1	143	(0)	2340376
1049	13.2	0.0	12.7	chr20	47541466	47541685	(16902482)	C	AluJr	SINE/Alu	(100)	212	21	2340377
798	25.4	15.3	6.2	chr20	47770551	47771032	(16673135)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	46	2340813
310	21.7	0.0	0.0	chr20	47855801	47855860	(16588307)	C	LTR55	LTR/ERVL?	(488)	60	1	2340989
671	24.9	8.7	7.1	chr20	47855881	47856174	(16587993)	+	LTR67B	LTR/ERVL	322	620	(0)	2340988
263	24.2	20.3	1.9	chr20	47856246	47856401	(16587766)	C	MER102a	DNA/hAT-Charlie	(107)	223	32	2340992
1353	20.7	4.0	11.3	chr20	47856418	47856723	(16587444)	C	MLT1B	LTR/ERVL-MaLR	(8)	382	111	2340993
1240	9.6	14.5	1.5	chr20	49659798	49659995	(14784172)	C	AluSx	SINE/Alu	(0)	312	85	2344991
354	20.4	10.6	0.0	chr20	49660307	49660399	(14783768)	C	MER103C	DNA/hAT-Charlie	(104)	193	90	2344992
938	14.7	2.6	0.0	chr20	49979640	49979789	(14464378)	+	AluJo	SINE/Alu	1	154	(158)	2345766
231	28.2	2.3	0.0	chr20	49997906	49997990	(14446177)	C	L2b	LINE/L2	(198)	3177	3091	2345806
213	30.4	13.2	0.6	chr20	49998121	49998292	(14445875)	C	L2b	LINE/L2	(494)	2925	2729	2345806
218	24.9	2.9	3.6	chr20	49998480	49998544	(14445623)	C	MIRb	SINE/MIR	(27)	241	172	2345807
1275	14.2	3.7	4.1	chr20	50165637	50165856	(14278311)	+	MER20	DNA/hAT-Charlie	1	219	(0)	2346247
22	12.6	4.4	0.0	chr20	50166362	50166406	(14277761)	+	(CTTCT)n	Simple_repeat	1	47	(0)	2346248
1578	15.4	5.4	10.2	chr20	50166407	50166714	(14277453)	C	L1MB3	LINE/L1	(328)	5855	5547	2346249
2037	13.1	0.0	0.0	chr20	50422862	50423180	(14020987)	+	AluSz	SINE/Alu	1	312	(0)	2346883
326	30.5	4.3	0.7	chr20	50423539	50423680	(14020487)	C	MIRc	SINE/MIR	(49)	159	16	2346884
14	25.6	0.0	5.3	chr20	50423713	50423769	(14020398)	+	GA-rich	Low_complexity	1	57	(0)	2346885
281	32.7	12.5	4.0	chr20	50423842	50424067	(14020100)	C	MIRb	SINE/MIR	(16)	252	5	2346886
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
12	30.4	1.9	0.0	chr20	50931218	50931269	(13512898)	+	G-rich	Low_complexity	1	53	(0)	2348043
21	22.7	1.5	3.0	chr20	50931286	50931350	(13512817)	+	(CGG)n	Simple_repeat	1	66	(0)	2348044
19	11.2	5.1	0.0	chr20	51023134	51023172	(13420995)	+	GA-rich	Low_complexity	1	41	(0)	2348236
2507	15.7	2.1	0.5	chr20	51195457	51195867	(13248300)	C	MSTB	LTR/ERVL-MaLR	(7)	419	2	2348631
530	22.5	3.2	3.7	chr20	52104523	52104739	(12339428)	+	L2a	LINE/L2	2960	3175	(251)	2350767
1103	22.2	3.2	0.0	chr20	53224963	53225174	(11218993)	C	MER58A	DNA/hAT-Charlie	(3)	221	3	2353037
181	27.8	0.0	0.0	chr20	53225363	53225416	(11218751)	+	L2c	LINE/L2	3332	3385	(2)	2353038
55	7.0	0.0	0.0	chr20	53563606	53563681	(10880486)	+	(CTCCC)n	Simple_repeat	1	76	(0)	2353776
2070	13.4	0.0	0.0	chr20	53563688	53563979	(10880188)	C	AluSz6	SINE/Alu	(20)	292	1	2353777
14	12.8	2.6	5.1	chr20	53593709	53593746	(10850421)	+	G-rich	Low_complexity	1	39	(0)	2353815
21	11.1	3.7	5.4	chr20	53593842	53593895	(10850272)	+	GA-rich	Low_complexity	1	56	(0)	2353816
19	22.9	3.2	1.5	chr20	53594516	53594578	(10849589)	+	(CCCCCGC)n	Simple_repeat	1	65	(0)	2353818
2330	10.9	0.0	0.0	chr20	53892388	53892689	(10551478)	+	AluSx1	SINE/Alu	1	302	(10)	2354599
84	9.6	0.0	5.2	chr20	53892708	53892860	(10551307)	+	(CTCCC)n	Simple_repeat	1	153	(0)	2354600
360	31.4	4.5	3.9	chr20	53892907	53893085	(10551082)	+	MIRb	SINE/MIR	35	214	(54)	2354601
567	26.4	10.9	8.6	chr20	56779558	56779789	(7664378)	+	MIR	SINE/MIR	21	258	(4)	2359843
260	27.0	2.9	1.0	chr20	56779788	56779888	(7664279)	+	L2	LINE/L2	2895	2997	(422)	2359844
23	22.9	4.3	0.0	chr20	56779889	56779957	(7664210)	+	(CCTCT)n	Simple_repeat	1	72	(0)	2359845
217	31.4	5.9	3.5	chr20	56779958	56780188	(7663979)	+	L2b	LINE/L2	2931	3167	(208)	2359846
24	24.8	1.1	4.5	chr20	57709861	57709948	(6734219)	+	(CGC)n	Simple_repeat	1	89	(0)	2361623
13	15.4	0.0	3.2	chr20	58891146	58891176	(5552991)	+	(CCCGG)n	Simple_repeat	1	31	(0)	2363584
37	24.7	3.5	3.4	chr20	58891209	58891351	(5552816)	+	(GCC)n	Simple_repeat	1	148	(0)	2363585
21	32.9	2.8	0.9	chr20	58891362	58891468	(5552699)	+	(CGG)n	Simple_repeat	1	110	(0)	2363586
18	15.0	11.6	1.3	chr20	58891914	58891939	(5552228)	+	(GCGCC)n	Simple_repeat	1	76	(0)	2363589
15	17.0	2.4	2.3	chr20	58891940	58891981	(5552186)	+	(CCCGCCC)n	Simple_repeat	1	43	(0)	2363590
28	17.8	0.0	0.0	chr20	58892124	58892174	(5551993)	+	(TC)n	Simple_repeat	1	51	(0)	2363591
13	31.2	0.0	4.2	chr20	58892524	58892595	(5551572)	+	G-rich	Low_complexity	1	72	(0)	2363592
245	29.9	5.8	6.8	chr20	59221947	59222136	(5222031)	C	X8_LINE	LINE/CR1	(67)	229	42	2364111
281	37.9	3.5	2.8	chr20	59765829	59765972	(4678195)	+	MIRb	SINE/MIR	92	236	(32)	2365008
16	18.9	0.0	0.0	chr20	59933752	59933781	(4510386)	+	(C)n	Simple_repeat	1	30	(0)	2365216
21	14.5	0.0	0.0	chr20	59958756	59958793	(4485374)	+	(GCT)n	Simple_repeat	1	38	(0)	2365249
2053	18.3	0.3	0.0	chr20	59959089	59959399	(4484768)	C	AluJb	SINE/Alu	(0)	312	1	2365250
1989	14.2	8.0	0.9	chr20	61029163	61029510	(3414657)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2366837
20	10.6	4.9	0.0	chr20	61967427	61967467	(2476700)	+	(CCACCTC)n	Simple_repeat	1	43	(0)	2367963
19	31.2	7.7	0.0	chr20	61978573	61978702	(2465465)	+	(CCGAGG)n	Simple_repeat	1	140	(0)	2367971
12	15.8	4.2	6.0	chr20	61984854	61984901	(2459266)	+	G-rich	Low_complexity	1	50	(0)	2367975
578	22.3	7.8	0.6	chr20	61985073	61985239	(2458928)	+	L1MC4a	LINE/L1	6096	6275	(1607)	2367976
636	24.8	0.0	0.8	chr20	61985297	61985429	(2458738)	+	FLAM_A	SINE/Alu	1	132	(10)	2367977
1324	17.7	6.5	7.8	chr20	62111892	62112173	(2331994)	+	AluJb	SINE/Alu	11	288	(24)	2368158
26	5.7	0.0	0.0	chr20	62112174	62112210	(2331957)	+	(GGGGA)n	Simple_repeat	1	37	(0)	2368159
2229	10.4	0.0	1.3	chr20	62301637	62301943	(2142224)	C	AluSz	SINE/Alu	(6)	306	4	2368406
387	27.8	9.9	1.9	chr20	62776676	62776888	(1667279)	C	LTR16A	LTR/ERVL	(17)	434	203	2368931
36	35.1	1.9	4.1	chr20	62776953	62777214	(1666953)	+	G-rich	Low_complexity	1	267	(0)	2368932
1861	31.6	7.8	4.8	chr20	62874540	62875101	(1569066)	+	ERVL-E-int	LTR/ERVL	573	1157	(4510)	2369060
198	13.0	0.6	0.0	chr20	62875203	62875521	(1568646)	+	(CCCCCA)n	Simple_repeat	1	321	(0)	2369062
406	32.0	1.5	0.0	chr20	62875523	62875650	(1568517)	+	ERVL-E-int	LTR/ERVL	1299	1428	(4239)	2369060
136	14.2	0.9	0.0	chr20	63101557	63101782	(1342385)	+	(TCTCTC)n	Simple_repeat	1	228	(0)	2369269
22	25.5	3.5	2.2	chr20	63361305	63361391	(1082776)	+	(GGCGC)n	Simple_repeat	1	90	(0)	2369512
12	17.0	7.5	0.0	chr20	63472648	63472687	(971480)	+	(CGGCGC)n	Simple_repeat	1	43	(0)	2369597
113	18.7	6.2	1.8	chr20	63472726	63473047	(971120)	+	GA-rich	Low_complexity	1	342	(0)	2369598
13	16.0	2.7	2.6	chr20	63538166	63538202	(905965)	+	(CCTCCAG)n	Simple_repeat	1	38	(0)	2369685
2013	12.1	0.0	4.7	chr20	63915948	63916245	(527922)	C	AluSz6	SINE/Alu	(26)	286	3	2370247
4241	9.0	5.5	1.1	chr20	63916247	63917228	(526939)	C	MER11A	LTR/ERVK	(0)	1266	1	2370248
17	24.1	6.2	1.4	chr20	64079852	64079916	(364251)	+	(GC)n	Simple_repeat	1	69	(0)	2370483
11	13.2	5.7	2.7	chr20	64079938	64079972	(364195)	+	G-rich	Low_complexity	1	37	(0)	2370484
31	16.0	1.3	4.0	chr20	64080031	64080106	(364061)	+	(CCCGC)n	Simple_repeat	1	74	(0)	2370485
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1054	19.2	0.8	15.5	chr21	8841102	8841704	(37868279)	C	SATR2	Satellite	(0)	514	1	2374047
1557	12.4	5.2	1.8	chr21	9037680	9043099	(37666884)	C	GSATII	Satellite/centr	(32)	5569	1	2374167
3259	16.9	0.9	3.6	chr21	9043063	9043736	(37666247)	+	TAR1	Satellite/telo	1413	2068	(43)	2374168
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
276	23.1	0.7	5.6	chr21	9367331	9367505	(37342478)	+	HSAT5	Satellite	1	166	(0)	2374470
292	25.6	0.0	4.8	chr21	9367666	9367880	(37342103)	+	HSAT5	Satellite	1	204	(1)	2374471
1951	29.8	4.7	5.4	chr21	9816509	9817787	(36892196)	C	SST1	Satellite/centr	(11)	1552	284	2374893
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
25	18.6	7.6	0.0	chr21	10405379	10405457	(36304526)	+	(CCCCAAT)n	Simple_repeat	1	85	(0)	2375496
15	18.4	4.7	0.0	chr21	10405422	10405464	(36304519)	+	(ATCCGCG)n	Simple_repeat	1	45	(0)	2375497
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
1644	15.3	3.7	7.2	chr21	10520874	10521013	(36188970)	C	AluJb	SINE/Alu	(167)	145	3	2375689
16	11.7	0.0	0.0	chr21	15064946	15064973	(31645010)	+	(CGC)n	Simple_repeat	1	28	(0)	2378615
27	3.5	0.0	0.0	chr21	15730357	15730386	(30979597)	+	(CGC)n	Simple_repeat	1	30	(0)	2379541
16	13.7	0.0	0.0	chr21	16588407	16588431	(30121552)	+	(T)n	Simple_repeat	1	25	(0)	2380618
738	22.6	1.2	10.3	chr21	17911834	17911943	(28798040)	+	MER96B	DNA/hAT-Tip100	2	86	(331)	2382385
1376	14.5	0.8	6.1	chr21	17911944	17912133	(28797850)	C	L1PB2	LINE/L1	(2)	6149	5972	2382386
2686	4.2	0.0	1.0	chr21	17912134	17912440	(28797543)	C	AluYf1	SINE/Alu	(7)	304	1	2382387
11143	10.8	1.0	0.1	chr21	21593340	21594904	(25115079)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2387189
147	16.4	3.4	0.0	chr21	25373568	25373859	(21336124)	+	(TCC)n	Simple_repeat	1	302	(0)	2392403
349	31.0	12.4	3.0	chr21	25809414	25809676	(20900307)	+	MamRep38	DNA/hAT	1	291	(4)	2393063
2234	18.9	3.2	0.9	chr21	25809679	25810087	(20899896)	+	MSTB	LTR/ERVL-MaLR	3	428	(0)	2393064
323	30.2	12.9	1.0	chr21	25810137	25810287	(20899696)	+	L3	LINE/CR1	3866	4036	(63)	2393065
1815	18.6	12.7	8.1	chr21	26704104	26704583	(20005400)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2394366
15	29.4	3.2	0.0	chr21	29299273	29299292	(17410691)	+	(CCCG)n	Simple_repeat	1	61	(0)	2398093
11	20.7	5.1	0.0	chr21	29299293	29299331	(17410652)	+	(GCCCGCG)n	Simple_repeat	1	41	(0)	2398094
2208	12.8	0.6	0.6	chr21	31614345	31614656	(15095327)	+	AluSz6	SINE/Alu	1	312	(0)	2401737
70	16.4	1.9	7.2	chr21	31614663	31614709	(15095274)	+	G-rich	Low_complexity	1	207	(0)	2401738
88	6.9	6.4	1.2	chr21	31614710	31614865	(15095118)	+	(GAAGGG)n	Simple_repeat	1	166	(0)	2401739
495	17.8	5.2	9.2	chr21	31614913	31615054	(15094929)	C	MamRep137	DNA/TcMar-Tigger	(168)	342	207	2401740
12	19.3	0.0	5.1	chr21	31731235	31731273	(14978710)	+	(CCCCCG)n	Simple_repeat	1	39	(0)	2401951
2316	9.4	0.0	0.0	chr21	31811636	31811922	(14898061)	C	AluSc	SINE/Alu	(21)	288	2	2402136
268	31.0	1.5	7.2	chr21	31812032	31812170	(14897813)	C	MIR	SINE/MIR	(106)	156	26	2402135
5174	15.0	4.5	0.2	chr21	32570041	32570878	(14139105)	+	Tigger1	DNA/TcMar-Tigger	1	875	(1543)	2403452
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
16	17.2	7.4	1.7	chr21	33230305	33230358	(13479625)	+	(TCC)n	Simple_repeat	1	58	(0)	2404551
14	28.2	4.7	0.0	chr21	33230359	33230368	(13479615)	+	(TCCCTC)n	Simple_repeat	1	67	(0)	2404552
14	15.3	0.0	0.0	chr21	33230490	33230518	(13479465)	+	(CACCC)n	Simple_repeat	1	29	(0)	2404553
18	17.7	0.0	0.0	chr21	33266337	33266374	(13443609)	+	(CGCCC)n	Simple_repeat	1	38	(0)	2404621
12	8.9	4.2	0.0	chr21	33266485	33266508	(13443475)	+	(GCTG)n	Simple_repeat	1	25	(0)	2404622
3641	16.5	5.6	1.6	chr21	33329884	33330573	(13379410)	+	L1M4c	LINE/L1	175	893	(5646)	2404737
1722	15.3	3.6	0.7	chr21	33404434	33404727	(13305256)	C	AluJb	SINE/Alu	(8)	304	2	2404897
21	0.0	0.0	0.0	chr21	35016882	35016904	(11693079)	+	(TG)n	Simple_repeat	1	23	(0)	2407483
16	22.1	2.1	0.0	chr21	36385368	36385414	(10324569)	+	(GCGCGGC)n	Simple_repeat	1	48	(0)	2409764
200	20.4	11.1	2.7	chr21	36705787	36705886	(10004097)	C	MIRb	SINE/MIR	(64)	198	98	2410360
720	29.4	12.4	3.3	chr21	36852314	36852769	(9857214)	+	LTR105_Mam	LTR/ERVL	3	569	(31)	2410555
12	24.3	0.0	0.0	chr21	37006634	37006667	(9703316)	+	(CCCCG)n	Simple_repeat	1	34	(0)	2410846
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
2476	17.3	4.5	2.0	chr21	37291800	37292212	(9417771)	C	MER77B	LTR/ERVL	(226)	474	1	2411314
605	23.5	13.1	1.5	chr21	37292330	37292644	(9417339)	+	MLT1J	LTR/ERVL-MaLR	97	505	(7)	2411309
1991	15.6	1.0	0.0	chr21	37340842	37341149	(9368834)	+	AluJb	SINE/Alu	1	311	(1)	2411420
1238	21.6	7.9	1.7	chr21	37341150	37341318	(9368665)	C	L1MC5	LINE/L1	(269)	9035	8859	2411418
19	12.2	5.6	0.0	chr21	37341335	37341370	(9368613)	+	(TC)n	Simple_repeat	1	38	(0)	2411421
91	3.1	0.0	7.8	chr21	38678822	38678975	(8031008)	+	(AGGGG)n	Simple_repeat	1	154	(0)	2413315
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
2764	12.5	1.2	1.0	chr21	38905255	38905659	(7804324)	C	LTR9B	LTR/ERV1	(0)	644	239	2413679
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
17	18.5	0.0	0.0	chr21	39349263	39349293	(7360690)	+	(C)n	Simple_repeat	1	31	(0)	2414411
621	32.3	10.4	3.9	chr21	42547906	42548759	(4161224)	+	L2	LINE/L2	1967	2882	(537)	2419020
822	24.6	10.2	2.9	chr21	42818562	42818833	(3891150)	+	MLT1A	LTR/ERVL-MaLR	3	296	(78)	2419385
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
32	23.9	1.2	1.1	chr21	42974686	42974771	(3735212)	+	(CCG)n	Simple_repeat	1	87	(0)	2419664
700	18.0	3.8	0.8	chr21	43002027	43002154	(3707829)	C	AluJo	SINE/Alu	(178)	134	3	2419724
240	25.0	20.4	2.8	chr21	43002196	43002339	(3707644)	+	L2b	LINE/L2	2316	2491	(928)	2419721
17	12.6	2.9	0.0	chr21	43776445	43776479	(2933504)	+	G-rich	Low_complexity	1	36	(0)	2420779
21	5.6	5.4	0.0	chr21	43789349	43789385	(2920598)	+	(CGCAGG)n	Simple_repeat	1	39	(0)	2420812
1967	23.5	10.1	1.4	chr21	44453487	44454856	(2255127)	+	L1ME1	LINE/L1	4887	6179	(0)	2421768
16	27.3	0.0	4.5	chr21	44455130	44455196	(2254787)	+	(CCCCAC)n	Simple_repeat	1	67	(0)	2421770
21	26.0	0.0	7.1	chr21	44455404	44455502	(2254481)	+	(GCCCC)n	Simple_repeat	1	99	(0)	2421771
12	25.2	2.4	0.0	chr21	44455534	44455575	(2254408)	+	(GGTCGC)n	Simple_repeat	1	43	(0)	2421772
2201	18.3	9.8	3.8	chr21	44484506	44484797	(2225186)	C	MER101B	LTR/ERV1	(7)	563	234	2421813
150	5.1	1.6	0.5	chr21	44484798	44484983	(2225000)	+	(GGGGCGTGA)n	Simple_repeat	1	189	(0)	2421814
2201	18.3	9.8	3.8	chr21	44484984	44485218	(2224765)	C	MER101B	LTR/ERV1	(337)	233	2	2421813
2064	15.6	11.4	0.1	chr21	44534581	44535257	(2174726)	+	L1MB3	LINE/L1	5428	6182	(1)	2421856
1776	14.5	0.3	1.7	chr21	44939420	44939708	(1770275)	+	AluJr	SINE/Alu	1	285	(27)	2422348
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
20	22.7	0.0	3.3	chr21	44940122	44940181	(1769802)	+	(CCGGCC)n	Simple_repeat	1	60	(0)	2422350
31	0.0	0.0	0.0	chr21	45001934	45001962	(1708021)	+	(GCCCCT)n	Simple_repeat	1	29	(0)	2422394
17	28.0	1.7	0.0	chr21	45018712	45018771	(1691212)	+	G-rich	Low_complexity	1	61	(0)	2422414
26	0.0	0.0	0.0	chr21	45018905	45018929	(1691054)	+	(GGCCCC)n	Simple_repeat	1	25	(0)	2422415
19	17.6	0.0	3.6	chr21	45018985	45019032	(1690951)	+	G-rich	Low_complexity	1	46	(0)	2422416
972	17.6	4.0	2.5	chr21	45553452	45553649	(1156334)	C	L1MB3	LINE/L1	(1)	6182	5982	2422925
369	31.1	6.7	0.9	chr21	45554547	45554757	(1155226)	C	L1MB3	LINE/L1	(260)	5923	5700	2422925
2167	13.0	0.0	1.3	chr21	45601245	45601559	(1108424)	C	AluSz	SINE/Alu	(0)	312	2	2422983
322	31.9	8.7	3.6	chr21	45607351	45607545	(1102438)	+	L1MB5	LINE/L1	5804	6009	(165)	2422991
66	21.2	5.3	1.8	chr21	45607550	45607756	(1102227)	+	GA-rich	Low_complexity	1	218	(0)	2422992
301	22.8	6.5	10.6	chr21	45607774	45607886	(1102097)	+	L1MA10	LINE/L1	6227	6334	(0)	2422993
17	15.2	0.0	7.8	chr21	46001171	46001221	(708762)	+	GA-rich	Low_complexity	1	51	(0)	2423401
18	22.5	1.3	6.5	chr21	46097947	46098022	(611961)	+	(CCGCCTC)n	Simple_repeat	1	77	(0)	2423505
13	10.7	6.7	0.0	chr21	46098050	46098079	(611904)	+	(GGCGG)n	Simple_repeat	1	32	(0)	2423506
12	21.6	0.0	0.0	chr21	46098432	46098463	(611520)	+	G-rich	Low_complexity	1	32	(0)	2423507
197	18.1	2.7	4.3	chr21	46144362	46144774	(565209)	+	(CTCC)n	Simple_repeat	4	412	(0)	2423546
259	14.3	2.0	0.0	chr21	46160913	46160961	(549022)	+	LTR16E1	LTR/ERVL	489	538	(0)	2423558
183	31.2	11.1	0.0	chr21	46161116	46161179	(548804)	C	L2c	LINE/L2	(70)	3317	3246	2423559
1914	6.5	0.0	0.0	chr21	46297017	46297247	(412736)	+	AluSx1	SINE/Alu	1	231	(81)	2423747
936	24.7	14.4	3.2	chr21	46448219	46448532	(261451)	C	MER21C	LTR/ERVL	(124)	814	460	2423964
4462	9.1	4.2	3.2	chr21	46448533	46449316	(260667)	C	MER11A	LTR/ERVK	(0)	1266	316	2423965
850	26.0	16.6	1.2	chr22	10731601	10732083	(40086385)	+	L2a	LINE/L2	2767	3340	(86)	2424554
3758	11.6	4.7	5.8	chr22	11488504	11489517	(39328951)	C	MER11A	LTR/ERVK	(0)	1266	3	2425145
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
915	26.8	0.0	8.6	chr22	11614465	11614754	(39203714)	+	L1PREC2	LINE/L1	5888	6152	(8)	2425252
630	20.8	0.0	0.0	chr22	11816738	11816993	(39001475)	C	ACRO1	Satellite/acro	(38)	256	1	2425390
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
3058	20.8	2.7	1.3	chr22	11900876	11902001	(38916467)	C	L1MA5	LINE/L1	(354)	5946	4805	2425510
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
19	10.3	2.1	6.2	chr22	16610244	16610290	(34208178)	+	GA-rich	Low_complexity	1	48	(0)	2427596
22	23.9	0.0	0.0	chr22	17120740	17120793	(33697675)	+	GA-rich	Low_complexity	1	54	(0)	2428250
15	38.4	0.0	0.0	chr22	17120914	17120929	(33697539)	+	(TGCTGC)n	Simple_repeat	1	31	(49)	2428251
19	19.5	0.0	0.0	chr22	17120930	17120970	(33697498)	+	(GCC)n	Simple_repeat	1	41	(0)	2428252
15	38.4	0.0	0.0	chr22	17120971	17120993	(33697475)	+	(TGCTGC)n	Simple_repeat	32	80	(0)	2428251
21	3.3	0.0	3.0	chr22	17121362	17121394	(33697074)	+	(GGCGG)n	Simple_repeat	1	33	(0)	2428253
12	28.3	1.9	1.9	chr22	17369392	17369444	(33449024)	+	(GCCCCG)n	Simple_repeat	1	54	(0)	2428860
15	24.1	6.3	0.0	chr22	17369587	17369649	(33448819)	+	(GGCGCCC)n	Simple_repeat	1	67	(0)	2428861
755	16.3	18.0	0.0	chr22	17727789	17727966	(33090502)	C	MER20	DNA/hAT-Charlie	(2)	217	1	2429649
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
14	19.9	0.0	7.5	chr22	18906193	18906245	(31912223)	+	G-rich	Low_complexity	1	53	(0)	2431193
3580	17.7	4.3	3.2	chr22	19109050	19109781	(31708687)	+	L1MB2	LINE/L1	5402	6145	(26)	2431458
190	37.9	16.0	3.1	chr22	19201805	19202472	(31615996)	+	L2a	LINE/L2	699	1468	(1951)	2431602
19	21.5	0.0	8.0	chr22	19478991	19479065	(31339403)	+	(CCGCC)n	Simple_repeat	1	75	(0)	2432066
18	10.7	4.5	4.3	chr22	19479140	19479183	(31339285)	+	(CCG)n	Simple_repeat	1	46	(0)	2432067
234	32.2	11.4	3.2	chr22	20437106	20437385	(30381083)	+	L2b	LINE/L2	2931	3237	(150)	2433314
23	10.3	2.3	2.2	chr22	20437643	20437686	(30380782)	+	(GCA)n	Simple_repeat	1	45	(0)	2433315
31	15.8	5.4	5.9	chr22	20437757	20437868	(30380600)	+	(GGCGCG)n	Simple_repeat	1	118	(0)	2433316
1395	13.4	17.3	12.1	chr22	20449706	20449899	(30368569)	C	L1MD1	LINE/L1	(853)	5293	5053	2433330
23	21.0	0.0	10.2	chr22	20495544	20495651	(30322817)	+	(CGCGCC)n	Simple_repeat	1	108	(0)	2433426
41	2.4	0.0	0.0	chr22	20495799	20495840	(30322628)	+	(GGGAGGC)n	Simple_repeat	1	42	(0)	2433427
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
256	34.5	11.2	0.0	chr22	20736504	20736677	(30081791)	C	L2b	LINE/L2	(729)	2690	2495	2433833
442	29.2	13.3	1.0	chr22	20858043	20858246	(29960222)	C	MIRc	SINE/MIR	(32)	236	4	2434076
15	11.2	7.5	0.0	chr22	20858648	20858672	(29959796)	+	(GGAGCC)n	Simple_repeat	1	27	(0)	2434077
29	3.2	0.0	0.0	chr22	20858673	20858704	(29959764)	+	(CCGCCT)n	Simple_repeat	1	32	(0)	2434078
15	11.2	7.5	0.0	chr22	20858705	20858718	(29959750)	+	(GGAGCC)n	Simple_repeat	4	18	(0)	2434079
2005	13.4	4.3	0.0	chr22	21077818	21077936	(29740532)	C	AluSx	SINE/Alu	(193)	119	1	2434509
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
13	24.0	6.0	2.8	chr22	21568143	21568209	(29250259)	+	(GCGCC)n	Simple_repeat	1	71	(0)	2435443
797	25.8	13.7	8.0	chr22	21850478	21851029	(28967439)	+	L1ME3D	LINE/L1	4465	5083	(2154)	2436038
750	19.1	0.0	0.0	chr22	21851030	21851144	(28967324)	+	FLAM_A	SINE/Alu	1	115	(27)	2436044
797	25.7	10.9	6.9	chr22	21851145	21851488	(28966980)	+	L1ME3D	LINE/L1	5059	5442	(1795)	2436038
33	28.0	2.7	3.3	chr22	21867413	21867558	(28950910)	+	(CCG)n	Simple_repeat	1	150	(0)	2436079
12	9.8	0.0	0.0	chr22	21867625	21867646	(28950822)	+	(TGCC)n	Simple_repeat	1	22	(0)	2436080
19	24.2	1.7	1.6	chr22	21867648	21867707	(28950761)	+	G-rich	Low_complexity	1	61	(0)	2436081
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
221	28.4	1.9	8.1	chr22	22557441	22557551	(28260917)	C	MIRc	SINE/MIR	(120)	148	45	2437078
384	27.3	7.7	0.8	chr22	23565847	23565979	(27252489)	+	MIRb	SINE/MIR	46	188	(80)	2438497
258	20.7	0.0	0.7	chr22	23566056	23566129	(27252339)	C	MIRc	SINE/MIR	(91)	171	99	2438498
205	31.2	1.3	10.7	chr22	23566937	23567104	(27251364)	+	MIR1_Amn	SINE/MIR	2	153	(55)	2438499
301	29.7	6.6	2.3	chr22	24270379	24270502	(26547966)	+	L2a	LINE/L2	3268	3398	(28)	2439765
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
38	18.3	0.0	5.2	chr22	25147952	25148077	(25670391)	+	(CCTC)n	Simple_repeat	1	119	(0)	2441597
36	12.1	1.5	1.5	chr22	25564572	25564636	(25253832)	+	GA-rich	Low_complexity	1	66	(0)	2442496
2420	11.0	0.0	0.0	chr22	25646741	25647049	(25171419)	+	AluSg	SINE/Alu	1	309	(1)	2442620
910	21.6	4.5	8.8	chr22	25647050	25647142	(25171326)	+	L1MEg2	LINE/L1	2779	2870	(4680)	2442618
2304	10.7	0.7	0.0	chr22	25735319	25735627	(25082841)	C	AluSp	SINE/Alu	(2)	311	1	2442735
364	31.9	5.7	0.9	chr22	25735697	25735914	(25082554)	+	LTR33	LTR/ERVL	64	292	(223)	2442736
475	26.7	5.3	2.7	chr22	25735929	25736030	(25082438)	+	LTR33	LTR/ERVL	326	430	(85)	2442736
14	23.9	0.0	6.6	chr22	26427795	26427855	(24390613)	+	GA-rich	Low_complexity	1	61	(0)	2444327
20	25.1	0.0	6.9	chr22	26428012	26428098	(24390370)	+	(GGACGTG)n	Simple_repeat	1	87	(0)	2444328
14	23.9	0.0	6.6	chr22	26428117	26428177	(24390291)	+	GA-rich	Low_complexity	1	61	(0)	2444329
16	18.9	0.0	0.0	chr22	27260366	27260395	(23558073)	+	(C)n	Simple_repeat	1	30	(0)	2446317
21	24.4	5.1	1.2	chr22	27919212	27919290	(22899178)	+	(GCC)n	Simple_repeat	1	83	(0)	2447727
25	27.8	3.2	5.5	chr22	28679779	28679936	(22138532)	+	(CGCGCCC)n	Simple_repeat	1	163	(0)	2448922
26	19.0	4.4	5.3	chr22	28773015	28773138	(22045330)	+	G-rich	Low_complexity	1	122	(0)	2449171
305	20.0	0.0	3.0	chr22	28773181	28773247	(22045221)	C	MIR	SINE/MIR	(118)	144	80	2449172
15	18.3	2.1	4.2	chr22	29307067	29307113	(21511355)	+	(CGGCC)n	Simple_repeat	1	48	(0)	2450303
11	25.3	0.0	5.8	chr22	29580899	29580950	(21237518)	+	(CAGCCC)n	Simple_repeat	1	52	(0)	2450909
287	24.8	10.6	0.0	chr22	29581240	29581340	(21237128)	+	MIR3	SINE/MIR	43	155	(53)	2450910
2238	8.1	0.0	1.1	chr22	29837149	29837431	(20981037)	+	AluSc8	SINE/Alu	1	280	(31)	2451450
450	29.4	8.0	10.5	chr22	29837432	29837442	(20981026)	C	L2a	LINE/L2	(303)	3084	3074	2451448
802	21.7	1.3	5.2	chr22	29837679	29837911	(20980557)	+	L2a	LINE/L2	3180	3426	(0)	2451451
13	0.0	0.0	0.0	chr22	29883217	29883233	(20935235)	+	(GGC)n	Simple_repeat	1	17	(0)	2451571
629	10.6	6.6	1.7	chr22	29971465	29971579	(20846889)	C	L1MA8	LINE/L1	(2)	6289	6169	2451744
16	16.0	7.0	0.0	chr22	30246294	30246336	(20572132)	+	A-rich	Low_complexity	1	46	(0)	2452227
32	8.3	1.9	1.8	chr22	30246390	30246443	(20572025)	+	(GGA)n	Simple_repeat	1	55	(0)	2452228
2055	12.0	0.0	6.2	chr22	30606225	30606548	(20211920)	C	AluJb	SINE/Alu	(6)	306	3	2452997
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
19	16.8	0.0	0.0	chr22	30635690	30635695	(20182773)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2453064
15	17.6	0.0	0.0	chr22	30635696	30635727	(20182741)	+	(GGC)n	Simple_repeat	1	32	(0)	2453065
12	15.3	3.5	0.0	chr22	30635736	30635764	(20182704)	+	(GCGCC)n	Simple_repeat	1	30	(0)	2453066
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
23	33.0	0.0	2.9	chr22	30969596	30969698	(19848770)	+	(CGG)n	Simple_repeat	1	103	(0)	2453683
391	24.6	3.3	2.5	chr22	30969851	30969971	(19848497)	+	MIR1_Amn	SINE/MIR	21	142	(126)	2453684
532	28.7	3.7	2.4	chr22	31943631	31943845	(18874623)	+	MIRb	SINE/MIR	19	250	(18)	2456005
16	12.1	5.6	0.0	chr22	31944032	31944067	(18874401)	+	G-rich	Low_complexity	1	38	(0)	2456006
14	5.0	0.0	0.0	chr22	31944332	31944352	(18874116)	+	(GGC)n	Simple_repeat	1	21	(0)	2456007
13	27.3	0.0	2.0	chr22	31944395	31944444	(18874024)	+	(CCCGCCC)n	Simple_repeat	1	50	(0)	2456008
2368	8.5	0.7	0.0	chr22	32881774	32882068	(17936400)	+	AluSx	SINE/Alu	1	297	(15)	2457883
18	18.1	3.9	1.9	chr22	33058470	33058521	(17759947)	+	(ACGCCC)n	Simple_repeat	1	54	(0)	2458292
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
197	20.1	0.3	0.5	chr22	34396344	34396732	(16421736)	+	(TCTC)n	Simple_repeat	1	390	(0)	2460961
596	27.9	10.3	0.9	chr22	35257128	35257355	(15561113)	+	MIRb	SINE/MIR	2	253	(15)	2462579
248	29.3	8.9	2.4	chr22	35492379	35492504	(15325964)	+	L2c	LINE/L2	3016	3150	(225)	2463134
12	18.3	0.0	3.0	chr22	35840509	35840541	(14977927)	+	(CCCCTC)n	Simple_repeat	1	33	(0)	2463826
38	5.0	0.0	0.0	chr22	35840616	35840657	(14977811)	+	(GT)n	Simple_repeat	1	42	(0)	2463827
18	6.5	0.0	5.6	chr22	36817593	36817628	(14000840)	+	(CAGGGA)n	Simple_repeat	1	36	(0)	2465918
12	14.4	7.5	2.3	chr22	37019521	37019560	(13798908)	+	(CGC)n	Simple_repeat	1	43	(0)	2466322
15	23.9	0.0	2.2	chr22	37019627	37019672	(13798796)	+	G-rich	Low_complexity	1	46	(0)	2466323
14	15.8	0.0	5.1	chr22	37020037	37020075	(13798393)	+	G-rich	Low_complexity	1	39	(0)	2466324
14	22.7	2.0	3.9	chr22	37052062	37052111	(13766357)	+	GA-rich	Low_complexity	1	51	(0)	2466410
13	20.9	0.0	4.7	chr22	37085895	37085937	(13732531)	+	G-rich	Low_complexity	1	43	(0)	2466476
17	20.5	2.4	11.5	chr22	37085992	37086118	(13732350)	+	GA-rich	Low_complexity	1	130	(0)	2466477
2988	9.0	3.4	0.7	chr22	37260023	37260446	(13558022)	C	MER1A	DNA/hAT-Charlie	(0)	529	94	2466831
766	29.9	12.4	1.6	chr22	37261028	37261466	(13557002)	C	L2	LINE/L2	(613)	2806	2314	2466833
236	26.5	2.0	6.7	chr22	37566835	37566939	(13251529)	C	MIRc	SINE/MIR	(120)	148	49	2467541
322	19.0	6.3	2.4	chr22	37566984	37567086	(13251382)	+	MIR3	SINE/MIR	24	129	(139)	2467542
212	32.8	19.1	0.6	chr22	37567156	37567347	(13251121)	+	MIRb	SINE/MIR	35	267	(1)	2467543
201	30.6	2.6	13.5	chr22	37580198	37580334	(13238134)	+	MIR3	SINE/MIR	58	176	(32)	2467573
16	18.0	4.5	0.0	chr22	37608817	37608860	(13209608)	+	G-rich	Low_complexity	1	46	(0)	2467651
14	21.4	5.2	3.3	chr22	37677439	37677496	(13140972)	+	(TCAT)n	Simple_repeat	1	61	(0)	2467800
496	26.9	10.5	0.0	chr22	37782672	37782842	(13035626)	C	MIRb	SINE/MIR	(76)	192	2	2468052
353	33.8	8.8	1.2	chr22	37782867	37783065	(13035403)	C	MIR	SINE/MIR	(14)	248	46	2468053
192	27.4	14.3	1.2	chr22	37802211	37802295	(13016173)	C	MIR	SINE/MIR	(56)	206	109	2468116
32	2.9	0.0	0.0	chr22	37802609	37802643	(13015825)	+	(GAGGC)n	Simple_repeat	1	35	(0)	2468117
513	27.5	13.2	1.2	chr22	37904995	37905167	(12913301)	C	MIRb	SINE/MIR	(52)	216	20	2468376
16	20.7	0.0	4.2	chr22	37905344	37905391	(12913077)	+	(GGCT)n	Simple_repeat	1	48	(0)	2468377
13	8.5	4.0	0.0	chr22	37905914	37905938	(12912530)	+	(GGC)n	Simple_repeat	1	26	(0)	2468378
12	17.4	7.0	4.9	chr22	37906164	37906220	(12912248)	+	(GGC)n	Simple_repeat	1	61	(0)	2468379
28	19.3	5.5	4.3	chr22	37906307	37906415	(12912053)	+	(CGGAGC)n	Simple_repeat	1	115	(0)	2468380
14	21.3	2.6	0.0	chr22	38272954	38272991	(12545477)	+	(CGC)n	Simple_repeat	1	39	(0)	2469147
17	12.2	4.0	5.8	chr22	38398524	38398573	(12419895)	+	GA-rich	Low_complexity	1	52	(0)	2469395
21	30.2	2.1	2.0	chr22	38398893	38399009	(12419459)	+	(CGCCC)n	Simple_repeat	1	117	(0)	2469396
12	4.7	4.5	0.0	chr22	38399014	38399035	(12419433)	+	(GCGA)n	Simple_repeat	1	23	(0)	2469397
15	12.2	0.0	0.0	chr22	38426962	38426988	(12391480)	+	(CCT)n	Simple_repeat	1	27	(0)	2469464
16	36.3	1.1	3.2	chr22	38455693	38455785	(12362683)	+	(CT)n	Simple_repeat	1	94	(0)	2469533
15	18.1	3.1	7.5	chr22	38455805	38455879	(12362589)	+	(CGGCCC)n	Simple_repeat	1	71	(0)	2469534
14	23.1	0.0	6.9	chr22	38455963	38456020	(12362448)	+	(CCGC)n	Simple_repeat	1	58	(0)	2469535
13	13.1	2.7	5.3	chr22	38456052	38456088	(12362380)	+	G-rich	Low_complexity	1	38	(0)	2469536
15	11.7	0.0	0.0	chr22	38505819	38505846	(12312622)	+	(CTCGC)n	Simple_repeat	1	28	(0)	2469636
14	4.9	0.0	0.0	chr22	38570451	38570471	(12247997)	+	(GAGG)n	Simple_repeat	1	21	(0)	2469801
957	16.2	6.5	5.6	chr22	38704007	38704269	(12114199)	C	MER21B	LTR/ERVL	(63)	868	621	2470142
37	0.0	2.6	0.0	chr22	38704274	38704311	(12114157)	+	(TTTTTGTT)n	Simple_repeat	1	39	(0)	2470143
1958	10.0	2.9	4.3	chr22	38704317	38704597	(12113871)	C	AluSx	SINE/Alu	(35)	277	1	2470144
15	21.9	0.0	5.7	chr22	38794004	38794058	(12024410)	+	(CCGC)n	Simple_repeat	1	51	(0)	2470280
12	23.6	2.0	4.0	chr22	38982552	38982600	(11835868)	+	(CCCCT)n	Simple_repeat	1	50	(0)	2470650
1056	29.0	6.3	2.5	chr22	39128816	39129183	(11689285)	+	LTR16E1	LTR/ERVL	138	520	(18)	2470958
938	18.2	4.9	10.1	chr22	39129188	39129425	(11689043)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	166	2470959
25	33.6	1.7	1.6	chr22	39242071	39242190	(11576278)	+	(CGTG)n	Simple_repeat	1	122	(0)	2471184
183	31.7	4.7	1.2	chr22	39310843	39310925	(11507543)	+	MIR3	SINE/MIR	11	96	(112)	2471355
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
12	17.5	3.1	0.0	chr22	39498642	39498673	(11319795)	+	G-rich	Low_complexity	1	33	(0)	2471773
1383	22.9	14.6	4.7	chr22	39815461	39816003	(11002465)	+	L1ME3E	LINE/L1	5430	6055	(187)	2472362
2262	11.5	0.6	0.6	chr22	40442968	40443279	(10375189)	+	AluSz	SINE/Alu	1	312	(0)	2473561
2675	24.9	11.7	4.2	chr22	40443301	40444180	(10374288)	+	L1MDa	LINE/L1	16	1059	(5574)	2473562
539	21.2	6.2	6.2	chr22	40694625	40694770	(10123698)	C	MIR	SINE/MIR	(4)	258	113	2474119
352	31.4	7.2	4.2	chr22	40694817	40695032	(10123436)	+	L2c	LINE/L2	2936	3158	(229)	2474120
229	28.2	12.7	4.9	chr22	40732739	40732861	(10085607)	+	L2b	LINE/L2	3268	3424	(2)	2474230
25	17.7	0.0	3.3	chr22	40951150	40951210	(9867258)	+	(GCCCC)n	Simple_repeat	1	61	(0)	2474735
17	9.4	2.6	5.1	chr22	41092447	41092484	(9725984)	+	(GCG)n	Simple_repeat	1	39	(0)	2475139
14	25.3	1.8	3.6	chr22	41092589	41092643	(9725825)	+	GA-rich	Low_complexity	1	56	(0)	2475140
12	21.7	0.0	0.0	chr22	41092658	41092689	(9725779)	+	(GGCCG)n	Simple_repeat	1	32	(0)	2475141
265	28.1	6.2	7.5	chr22	41192169	41192314	(9626154)	C	L2	LINE/L2	(727)	2692	2549	2475338
517	29.8	2.5	0.8	chr22	41380904	41381086	(9437382)	C	MIR3	SINE/MIR	(15)	193	21	2475777
20	19.4	1.2	8.3	chr22	41381289	41381371	(9437097)	+	(CCCGC)n	Simple_repeat	1	84	(0)	2475778
26	20.5	0.0	0.0	chr22	41413576	41413631	(9404837)	+	GA-rich	Low_complexity	1	56	(0)	2475855
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
12	15.3	3.5	0.0	chr22	41833358	41833386	(8985082)	+	(GGTG)n	Simple_repeat	1	30	(0)	2476878
311	25.0	20.0	0.0	chr22	41919172	41919291	(8899177)	+	MIRb	SINE/MIR	38	187	(81)	2477054
17	16.6	6.4	0.0	chr22	41926171	41926217	(8892251)	+	(CACCAG)n	Simple_repeat	1	50	(0)	2477065
362	27.9	4.3	6.3	chr22	42074793	42075010	(8743458)	+	L2a	LINE/L2	3136	3364	(62)	2477375
727	18.0	2.9	2.9	chr22	42216080	42216246	(8602222)	C	AluJo	SINE/Alu	(0)	312	144	2477589
359	31.3	12.1	3.4	chr22	42259415	42259738	(8558730)	+	L2	LINE/L2	2286	2641	(778)	2477674
195	36.1	1.0	1.0	chr22	42444743	42444840	(8373628)	C	MIRc	SINE/MIR	(3)	265	168	2478067
16	26.1	0.0	3.5	chr22	42649136	42649193	(8169275)	+	G-rich	Low_complexity	1	58	(0)	2478570
18	10.7	7.1	5.0	chr22	42649320	42649375	(8169093)	+	(GCC)n	Simple_repeat	1	60	(0)	2478571
2288	10.8	0.0	0.3	chr22	43031334	43031630	(7786838)	+	AluSx1	SINE/Alu	1	296	(16)	2479418
259	27.4	19.7	3.0	chr22	43031631	43031927	(7786541)	C	L2a	LINE/L2	(270)	3156	2803	2479417
790	15.0	0.0	0.8	chr22	43031937	43032056	(7786412)	+	FLAM_C	SINE/Alu	1	119	(24)	2479419
15	17.6	0.0	4.8	chr22	43411569	43411614	(7406854)	+	(CCCGG)n	Simple_repeat	1	43	(0)	2480191
18	20.5	7.9	3.1	chr22	43411753	43411841	(7406627)	+	(CCGAGG)n	Simple_repeat	1	96	(0)	2480192
25	19.1	7.9	2.8	chr22	43412167	43412270	(7406198)	+	(GGCGC)n	Simple_repeat	1	109	(0)	2480193
501	29.8	6.1	3.5	chr22	44395741	44395994	(6422474)	+	L1MEd	LINE/L1	2205	2465	(0)	2481886
12	8.0	0.0	9.4	chr22	44396342	44396373	(6422095)	+	G-rich	Low_complexity	1	32	(0)	2481888
24	18.5	0.0	0.0	chr22	44668027	44668076	(6150392)	+	G-rich	Low_complexity	1	50	(0)	2482384
511	19.7	24.1	0.0	chr22	44668088	44668229	(6150239)	C	MER5A	DNA/hAT-Charlie	(0)	189	3	2482385
22	9.2	0.0	0.0	chr22	44668678	44668712	(6149756)	+	(GGGGC)n	Simple_repeat	1	35	(0)	2482386
2250	10.3	0.0	3.2	chr22	44870745	44871055	(5947413)	C	AluSx1	SINE/Alu	(11)	301	1	2482821
23	14.8	3.7	1.8	chr22	45007545	45007598	(5810870)	+	G-rich	Low_complexity	1	56	(0)	2483032
26	27.2	0.9	4.5	chr22	45007684	45007793	(5810675)	+	G-rich	Low_complexity	1	111	(0)	2483033
2336	9.5	2.8	0.6	chr22	45054026	45054376	(5764092)	+	THE1B	LTR/ERVL-MaLR	1	422	(6)	2483133
262	30.3	10.4	4.3	chr22	45268945	45269106	(5549362)	C	ORSL	DNA/hAT-Tip100	(22)	253	81	2483577
46	4.1	0.0	0.0	chr22	45269255	45269305	(5549163)	+	(GGCGGG)n	Simple_repeat	1	51	(0)	2483578
258	31.8	12.8	3.4	chr22	45269343	45269638	(5548830)	+	L2c	LINE/L2	2961	3288	(87)	2483566
4139	10.9	4.1	1.4	chr22	45404242	45404911	(5413557)	+	MER4D1	LTR/ERV1	96	891	(9)	2483847
467	34.1	10.2	5.2	chr22	45404915	45405278	(5413190)	C	L2a	LINE/L2	(132)	3294	2883	2483845
2382	9.9	0.0	0.7	chr22	45494197	45494500	(5323968)	C	AluSz	SINE/Alu	(10)	302	1	2484056
182	26.2	10.1	16.1	chr22	45494501	45494518	(5323950)	+	L2b	LINE/L2	3142	3158	(217)	2484055
1701	16.2	5.3	10.2	chr22	45494645	45494872	(5323596)	C	THE1D	LTR/ERVL-MaLR	(0)	381	153	2484057
2390	9.7	0.0	0.3	chr22	45494873	45495183	(5323285)	+	AluSz	SINE/Alu	2	311	(1)	2484058
15	15.3	5.3	0.0	chr22	45971238	45971275	(4847193)	+	G-rich	Low_complexity	1	40	(0)	2484814
237	35.5	6.1	2.9	chr22	46349244	46349417	(4469051)	+	MIR1_Amn	SINE/MIR	29	208	(22)	2485415
15	17.7	2.6	0.0	chr22	46738006	46738043	(4080425)	+	G-rich	Low_complexity	1	39	(0)	2485975
28	3.3	0.0	0.0	chr22	46738231	46738261	(4080207)	+	(CGGGCGG)n	Simple_repeat	1	31	(0)	2485976
368	29.5	12.0	0.7	chr22	46754744	46754883	(4063585)	+	MIRb	SINE/MIR	9	166	(102)	2486008
15	21.5	2.3	0.0	chr22	46754892	46754934	(4063534)	+	(CCACCC)n	Simple_repeat	1	44	(0)	2486009
3534	16.7	8.5	14.2	chr22	46755561	46756681	(4061787)	C	MSTB-int	LTR/ERVL-MaLR	(314)	1337	1	2486013
14	7.1	2.9	5.7	chr22	46762864	46762897	(4055571)	+	G-rich	Low_complexity	1	35	(0)	2486028
17	28.3	2.8	0.9	chr22	46878282	46878351	(3940117)	+	GA-rich	Low_complexity	1	71	(0)	2486173
2054	10.7	14.7	1.1	chr22	47306885	47307253	(3511215)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2486687
347	30.1	10.3	8.6	chr22	47307254	47307624	(3510844)	+	L2	LINE/L2	1490	1867	(1552)	2486688
93	19.7	0.0	0.0	chr22	47379205	47379385	(3439083)	+	(GCG)n	Simple_repeat	1	181	(0)	2486767
239	28.1	2.2	1.1	chr22	47379395	47379484	(3438984)	+	L1MEi	LINE/L1	1394	1484	(728)	2486768
3650	18.8	2.1	0.7	chr22	48663570	48664267	(2154201)	+	MER44C	DNA/TcMar-Tigger	26	733	(0)	2488476
42	2.0	0.0	5.4	chr22	49827760	49827815	(990653)	+	(GCGGGC)n	Simple_repeat	1	56	(0)	2489787
667	23.3	14.0	6.1	chr22	49877844	49878022	(940446)	C	L1ME1	LINE/L1	(289)	5890	5685	2489895
580	22.3	6.9	0.0	chr22	49926337	49926511	(891957)	+	L1MEd	LINE/L1	1153	1340	(5746)	2489973
12	18.6	5.4	0.0	chr22	49972734	49972770	(845698)	+	(CCACTGG)n	Simple_repeat	1	39	(0)	2490009
405	13.0	7.8	3.1	chr22	49972792	49973865	(844603)	+	(GT)n	Simple_repeat	1	1123	(0)	2490010
2229	12.9	0.0	0.6	chr22	50054776	50055086	(763382)	+	AluSx	SINE/Alu	1	309	(3)	2490123
1948	20.7	7.6	0.5	chr22	50074672	50075098	(743370)	+	MER66B	LTR/ERV1	27	486	(0)	2490146
86	15.6	7.8	1.9	chr22	50307696	50307937	(510531)	+	G-rich	Low_complexity	1	261	(0)	2490424
14	12.3	5.4	2.6	chr22	50326771	50326807	(491661)	+	(GCCC)n	Simple_repeat	1	39	(0)	2490449
21	17.6	3.3	3.2	chr22	50326808	50326827	(491641)	+	(CGCGCC)n	Simple_repeat	5	63	(0)	2490450
29	22.8	4.4	5.0	chr22	50481615	50481749	(336719)	+	(CGCCCG)n	Simple_repeat	1	141	(0)	2490731
17	17.7	0.0	0.0	chr22	50526098	50526135	(292333)	+	(CAGCGC)n	Simple_repeat	1	38	(0)	2490809
14	24.1	8.1	2.1	chr22	50526145	50526230	(292238)	+	G-rich	Low_complexity	1	93	(0)	2490810
1931	7.9	2.7	0.0	chr22	50543885	50544138	(274330)	C	AluSx1	SINE/Alu	(12)	300	40	2490842
2463	6.3	0.3	0.3	chr22	50620223	50620522	(197946)	+	AluSp	SINE/Alu	2	301	(12)	2490973
2861	11.1	0.2	1.2	chr22	50643246	50643656	(174812)	C	LTR8	LTR/ERV1	(0)	691	285	2491012
330	2.6	0.0	0.0	chr22	50643657	50643695	(174773)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
316	2.6	0.0	0.0	chr22	50643696	50643734	(174734)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
282	2.6	0.0	9.3	chr22	50643735	50643777	(174691)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
306	5.1	0.0	0.0	chr22	50643778	50643816	(174652)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
341	0.0	0.0	0.0	chr22	50643817	50643855	(174613)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
341	0.0	0.0	0.0	chr22	50643856	50643894	(174574)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
316	2.6	0.0	0.0	chr22	50643895	50643933	(174535)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
341	0.0	0.0	0.0	chr22	50643934	50643972	(174496)	C	LTR8	LTR/ERV1	(368)	323	285	2491012
255	3.2	0.0	0.0	chr22	50643985	50644015	(174453)	C	LTR8	LTR/ERV1	(376)	315	285	2491012
4517	9.4	3.6	1.8	chr3	1536507	1537505	(196758054)	+	MER11A	LTR/ERVK	1	1266	(0)	2494576
335	30.5	2.3	6.5	chr3	3873021	3873297	(194422262)	+	L2-3_Crp	LINE/L2	773	1037	(1059)	2498148
1599	29.2	4.2	9.6	chr3	3873320	3874133	(194421426)	+	L2a	LINE/L2	2296	3063	(356)	2498147
2020	21.5	5.6	0.6	chr3	4273136	4273674	(194021885)	+	L1MB7	LINE/L1	5603	6170	(14)	2498718
44	8.3	0.0	16.6	chr3	4273682	4273862	(194021697)	+	G-rich	Low_complexity	1	181	(0)	2498721
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
234	40.8	0.0	2.3	chr3	5027135	5027153	(193268406)	C	MIR3	SINE/MIR	(33)	175	157	2500012
2393	6.5	0.0	2.9	chr3	5027154	5027459	(193268100)	C	AluY	SINE/Alu	(14)	297	1	2500013
395	35.4	7.1	6.6	chr3	6670729	6671452	(191624107)	C	L2c	LINE/L2	(62)	3325	2594	2502584
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
209	36.7	2.4	0.0	chr3	9363318	9363437	(188932122)	+	MIR3	SINE/MIR	34	156	(52)	2507069
13	17.9	2.4	4.7	chr3	9403059	9403100	(188892459)	+	GA-rich	Low_complexity	1	43	(0)	2507138
2392	20.7	3.3	3.5	chr3	9726089	9726608	(188568951)	C	LTR40a	LTR/ERVL	(0)	519	1	2507828
333	21.4	3.0	5.8	chr3	9726828	9726931	(188568628)	+	MIRb	SINE/MIR	88	188	(80)	2507829
12	5.6	0.0	0.0	chr3	9726948	9726966	(188568593)	+	(ATA)n	Simple_repeat	1	19	(0)	2507830
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
227	25.0	5.0	0.0	chr3	10142262	10142337	(188153222)	C	MIRc	SINE/MIR	(121)	147	68	2508745
14	26.0	0.0	0.0	chr3	10992265	10992305	(187303254)	+	(GACA)n	Simple_repeat	1	41	(0)	2510527
41	29.3	3.1	3.5	chr3	10992344	10992538	(187303021)	+	G-rich	Low_complexity	1	201	(0)	2510528
13	22.4	0.0	4.4	chr3	11719351	11719395	(186576164)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2511932
13	19.6	4.0	3.9	chr3	11719645	11719694	(186575865)	+	(AGGCC)n	Simple_repeat	1	52	(0)	2511933
2425	15.9	10.6	1.3	chr3	11771910	11772059	(186523500)	C	L1PB4	LINE/L1	(10)	6146	5982	2512069
2264	10.6	0.0	3.4	chr3	11772060	11772380	(186523179)	C	AluY	SINE/Alu	(1)	310	1	2512070
4483	16.8	5.1	2.1	chr3	12113446	12114611	(186180948)	C	L1MB5	LINE/L1	(6)	6168	4969	2512705
13	22.5	0.0	0.0	chr3	12288097	12288132	(186007427)	+	G-rich	Low_complexity	1	36	(0)	2513013
307	26.3	10.8	0.0	chr3	12796307	12796405	(185499154)	C	MIRc	SINE/MIR	(127)	141	31	2514131
919	24.1	2.4	0.8	chr3	13196112	13196358	(185099201)	+	MLT1G3	LTR/ERVL-MaLR	230	480	(115)	2514805
12	26.1	0.0	0.0	chr3	13419716	13419752	(184875807)	+	G-rich	Low_complexity	1	37	(0)	2515200
238	25.4	3.1	1.6	chr3	14124435	14124498	(184171061)	+	MIRc	SINE/MIR	88	152	(116)	2516338
815	30.6	4.7	1.4	chr3	14196368	14196652	(184098907)	C	MLT1J2-int	LTR/ERVL-MaLR	(107)	1280	986	2516443
999	19.8	6.5	0.5	chr3	14532406	14532608	(183762951)	C	MER20	DNA/hAT-Charlie	(3)	216	1	2517144
17	23.7	4.4	2.8	chr3	14947927	14947994	(183347565)	+	(GGC)n	Simple_repeat	1	71	(0)	2517904
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
1719	15.0	1.5	1.1	chr3	15510427	15510699	(182784860)	+	AluJb	SINE/Alu	1	274	(38)	2518968
3926	7.9	0.6	0.6	chr3	15656123	15656645	(182638914)	+	LTR10G	LTR/ERV1	1	523	(0)	2519217
241	21.6	15.9	0.0	chr3	15656878	15656951	(182638608)	C	MLT1H1	LTR/ERVL-MaLR	(38)	541	454	2519218
1935	7.2	0.8	0.0	chr3	15731639	15731874	(182563685)	+	AluSq2	SINE/Alu	72	309	(4)	2519321
2314	17.0	0.7	3.0	chr3	15771426	15771746	(182523813)	C	MSTB	LTR/ERVL-MaLR	(114)	312	1	2519382
12	28.1	1.9	1.9	chr3	16092419	16092471	(182203088)	+	(CTCCAT)n	Simple_repeat	1	54	(0)	2519911
6065	17.4	2.9	0.4	chr3	17288317	17289416	(181006143)	+	LTR28C	LTR/ERV1	1	1129	(0)	2521680
1723	8.9	0.0	0.0	chr3	17289434	17289647	(181005912)	+	AluSc	SINE/Alu	81	294	(15)	2521681
2293	13.5	1.9	0.6	chr3	17433281	17433644	(180861915)	C	THE1C	LTR/ERVL-MaLR	(6)	369	1	2521860
8963	12.3	3.8	9.4	chr3	17433651	17435315	(180860244)	C	THE1C-int	LTR/ERVL-MaLR	(12)	1568	1	2521860
5395	10.4	2.8	0.5	chr3	17735447	17736208	(180559351)	C	LTR17	LTR/ERV1	(0)	780	1	2522293
443	16.7	0.0	6.0	chr3	17736209	17736270	(180559289)	+	AluJr	SINE/Alu	237	294	(18)	2522292
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
12	25.6	0.0	6.9	chr3	19146921	19146978	(179148581)	+	(CCGCC)n	Simple_repeat	1	58	(0)	2524271
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
15	17.5	0.0	0.0	chr3	20040242	20040274	(178255285)	+	(GCCGCC)n	Simple_repeat	1	33	(0)	2525556
21	22.5	1.2	6.0	chr3	20040468	20040549	(178255010)	+	G-rich	Low_complexity	1	83	(0)	2525557
33	9.0	5.0	0.0	chr3	20040837	20040896	(178254663)	+	(CCCGCCT)n	Simple_repeat	1	63	(0)	2525558
15	31.8	0.0	2.7	chr3	23203579	23203651	(175091908)	+	(CGTGCCC)n	Simple_repeat	1	73	(0)	2529844
566	24.3	8.6	0.0	chr3	23944643	23944823	(174350736)	C	L2	LINE/L2	(1012)	2407	2210	2531070
15	19.7	0.0	0.0	chr3	23944826	23944854	(174350705)	+	G-rich	Low_complexity	1	29	(0)	2531072
24	32.4	2.1	4.1	chr3	23945008	23945149	(174350410)	+	GA-rich	Low_complexity	1	145	(0)	2531073
18	6.0	8.6	0.0	chr3	23945493	23945527	(174350032)	+	(CGG)n	Simple_repeat	1	38	(0)	2531074
12	16.9	0.0	0.0	chr3	24494523	24494549	(173801010)	+	(CGCC)n	Simple_repeat	1	27	(0)	2531964
3950	6.7	0.0	0.2	chr3	27001024	27001543	(171294016)	+	LTR17	LTR/ERV1	262	780	(0)	2535463
13	14.9	2.3	6.8	chr3	30606765	30606807	(167688752)	+	(GCGCG)n	Simple_repeat	1	44	(0)	2540793
827	17.9	4.7	1.1	chr3	30944959	30945144	(167350415)	+	LTR41	LTR/ERVL	1	193	(575)	2541293
12	13.7	0.0	0.0	chr3	31981233	31981256	(166314303)	+	(GCT)n	Simple_repeat	1	24	(0)	2542978
17	11.2	0.0	0.0	chr3	31981315	31981343	(166314216)	+	(AGG)n	Simple_repeat	1	29	(0)	2542979
3968	11.0	10.4	3.4	chr3	32042551	32043639	(166251920)	C	MER11A	LTR/ERVK	(4)	1232	1	2543106
12	11.7	10.8	0.0	chr3	32816441	32816477	(165479082)	+	G-rich	Low_complexity	1	41	(0)	2544749
15	9.2	8.6	0.0	chr3	32816531	32816565	(165478994)	+	(CCCCT)n	Simple_repeat	1	38	(0)	2544750
17	14.2	0.0	0.0	chr3	32816652	32816682	(165478877)	+	(GAG)n	Simple_repeat	1	31	(0)	2544751
13	25.0	2.7	5.3	chr3	33097152	33097224	(165198335)	+	(CCCGCGC)n	Simple_repeat	1	75	(0)	2545277
26	14.1	2.9	4.3	chr3	33114562	33114629	(165180930)	+	(GCCCCG)n	Simple_repeat	1	70	(0)	2545325
278	30.2	8.0	0.8	chr3	33114709	33114835	(165180724)	+	MIRb	SINE/MIR	132	268	(0)	2545326
1392	23.0	12.4	4.0	chr3	37163293	37163695	(161131864)	+	MLT1J2	LTR/ERVL-MaLR	3	444	(4)	2551079
343	29.5	10.3	2.7	chr3	37163805	37163992	(161131567)	+	L1ME3D	LINE/L1	6003	6206	(36)	2551080
45	24.3	0.0	0.0	chr3	37861792	37861898	(160433661)	+	(CCCT)n	Simple_repeat	1	107	(0)	2552186
525	31.9	12.0	4.7	chr3	39027751	39028371	(159267188)	C	LTR78	LTR/ERV1	(480)	824	152	2553878
14	5.0	0.0	0.0	chr3	39153565	39153585	(159141974)	+	(CGG)n	Simple_repeat	1	21	(0)	2554043
234	25.5	3.8	3.8	chr3	39153892	39153997	(159141562)	C	MIR3	SINE/MIR	(40)	168	63	2554044
15	29.1	2.9	1.4	chr3	41199911	41199979	(157095580)	+	G-rich	Low_complexity	1	71	(0)	2557193
2448	8.9	0.3	0.0	chr3	41890398	41890700	(156404859)	+	AluSz	SINE/Alu	1	304	(8)	2558114
26	0.0	0.0	0.0	chr3	41891342	41891366	(156404193)	+	(GGAG)n	Simple_repeat	1	25	(0)	2558115
25	12.9	0.0	0.0	chr3	42600912	42600955	(155694604)	+	(CCCCGC)n	Simple_repeat	1	44	(0)	2559377
13	4.5	0.0	7.4	chr3	43286331	43286357	(155009202)	+	(TCC)n	Simple_repeat	1	27	(0)	2560422
16	12.7	0.0	5.3	chr3	43286463	43286500	(155009059)	+	(CGCCC)n	Simple_repeat	1	38	(0)	2560423
311	34.8	8.1	5.9	chr3	43286717	43287040	(155008519)	+	L1M4b	LINE/L1	338	669	(6198)	2560424
13	25.5	0.0	0.0	chr3	43690981	43691017	(154604542)	+	(GCG)n	Simple_repeat	1	37	(0)	2560995
2264	10.1	2.6	0.0	chr3	44291322	44291619	(154003940)	+	AluSg	SINE/Alu	2	307	(3)	2561861
1259	14.1	18.0	2.8	chr3	45916554	45916802	(152378757)	C	AluJo	SINE/Alu	(17)	295	1	2564652
13	15.5	5.6	0.0	chr3	45917068	45917103	(152378456)	+	(AGATGA)n	Simple_repeat	1	38	(0)	2564653
1969	24.9	9.7	6.8	chr3	46199111	46200403	(152095156)	+	L1MC4	LINE/L1	6504	8026	(16)	2565028
343	27.6	0.8	3.0	chr3	46200567	46200667	(152094892)	C	MIRb	SINE/MIR	(48)	220	114	2565035
11526	15.4	2.5	0.7	chr3	46421788	46423556	(151872003)	C	HERVL18-int	LTR/ERVL	(4237)	1810	9	2565366
242	27.1	6.8	5.9	chr3	46686140	46686241	(151609318)	C	MIR3	SINE/MIR	(15)	193	91	2565789
28	19.0	1.3	3.9	chr3	46693698	46693774	(151601785)	+	(CCCCG)n	Simple_repeat	1	78	(0)	2565798
15	26.8	0.0	0.0	chr3	47163892	47163936	(151131623)	+	(CTGCGG)n	Simple_repeat	1	45	(0)	2566541
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
17	24.5	1.5	4.3	chr3	47164059	47164126	(151131433)	+	(TCCC)n	Simple_repeat	1	69	(0)	2566543
5309	7.1	2.3	2.0	chr3	47459416	47460527	(150835032)	C	MER11A	LTR/ERVK	(0)	1266	1	2567186
11	27.4	2.0	2.0	chr3	48088856	48088905	(150206654)	+	(GGAGCCG)n	Simple_repeat	1	51	(0)	2568628
13	21.1	2.6	0.0	chr3	48089099	48089136	(150206423)	+	(TGCGGCC)n	Simple_repeat	1	39	(0)	2568629
749	17.6	3.1	8.8	chr3	48089409	48089613	(150205946)	+	MER33	DNA/hAT-Charlie	27	219	(105)	2568630
3539	8.9	3.1	1.4	chr3	48278318	48278831	(150016728)	+	LTR10G	LTR/ERV1	1	523	(0)	2569080
991	25.6	18.4	1.6	chr3	48511061	48511747	(149783812)	+	L2c	LINE/L2	2482	3370	(17)	2569480
13	9.0	4.9	7.0	chr3	49007806	49007846	(149287713)	+	(GGAGCGC)n	Simple_repeat	1	43	(0)	2570462
22	21.8	1.7	1.6	chr3	49007905	49007964	(149287595)	+	GA-rich	Low_complexity	1	61	(0)	2570463
6671	9.7	15.5	2.5	chr3	49140351	49141448	(149154111)	+	MER11A	LTR/ERVK	1	1266	(0)	2570709
47	2.2	0.0	0.0	chr3	49673796	49673842	(148621717)	+	(CTCACG)n	Simple_repeat	1	47	(0)	2571786
17	6.3	2.7	5.3	chr3	49724202	49724238	(148571321)	+	(GCCCCG)n	Simple_repeat	1	38	(0)	2571830
12	15.8	0.0	3.3	chr3	49869297	49869326	(148426233)	+	(CCCCG)n	Simple_repeat	1	30	(0)	2572129
12	23.9	0.0	2.4	chr3	50292275	50292315	(148003244)	+	G-rich	Low_complexity	1	41	(0)	2572875
204	27.6	3.4	5.0	chr3	50373461	50374419	(147921140)	+	G-rich	Low_complexity	1	942	(0)	2572964
20	10.0	6.8	4.8	chr3	50374673	50374731	(147920828)	+	G-rich	Low_complexity	1	63	(0)	2572965
856	25.6	19.4	1.0	chr3	51800575	51800977	(146494582)	C	L2a	LINE/L2	(0)	3426	2932	2574990
372	31.1	5.7	2.6	chr3	51974749	51974900	(146320659)	C	MIR	SINE/MIR	(0)	262	106	2575246
350	21.8	5.6	7.3	chr3	52057014	52057190	(146238369)	C	L2a	LINE/L2	(5)	3421	3199	2575387
15	23.3	3.5	6.7	chr3	52278686	52278771	(146016788)	+	G-rich	Low_complexity	1	89	(0)	2575687
92	29.9	1.6	4.1	chr3	52410122	52410550	(145885009)	+	G-rich	Low_complexity	1	436	(0)	2575858
2488	17.3	0.7	5.0	chr3	53201152	53201529	(145094030)	+	MER66B	LTR/ERV1	27	384	(102)	2577188
239	27.3	2.2	5.4	chr3	53254693	53254785	(145040774)	C	MIRb	SINE/MIR	(79)	189	100	2577295
338	31.2	8.6	1.8	chr3	53255289	53255451	(145040108)	+	MIR	SINE/MIR	13	187	(75)	2577296
26	21.9	4.7	1.1	chr3	53256022	53256107	(145039452)	+	G-rich	Low_complexity	1	90	(0)	2577297
13	18.1	0.0	7.0	chr3	53256129	53256171	(145039388)	+	(GCCCC)n	Simple_repeat	1	43	(0)	2577298
116	11.5	4.7	3.7	chr3	54970370	54970647	(143324912)	+	(TCTCC)n	Simple_repeat	1	280	(0)	2579777
607	21.8	7.8	0.0	chr3	56354088	56354252	(141941307)	C	Charlie23a	DNA/hAT-Charlie	(76)	263	85	2581968
1351	18.1	1.4	0.0	chr3	56354360	56354574	(141940985)	+	MER20	DNA/hAT-Charlie	1	218	(1)	2581969
27	13.9	3.6	0.0	chr3	56468325	56468380	(141827179)	+	(GGAGCC)n	Simple_repeat	1	58	(0)	2582184
14	7.2	0.0	8.6	chr3	56468451	56468485	(141827074)	+	G-rich	Low_complexity	1	35	(0)	2582185
12	15.5	0.0	9.3	chr3	56468989	56469031	(141826528)	+	A-rich	Low_complexity	1	43	(0)	2582186
357	19.4	15.3	0.0	chr3	57604481	57604552	(140691007)	+	AluJo	SINE/Alu	137	221	(91)	2584275
242	28.8	14.0	0.0	chr3	57604503	57604582	(140690977)	C	SVA_E	Retroposon/SVA	(1075)	307	215	2584276
1894	17.2	0.0	3.8	chr3	57604589	57604907	(140690652)	C	AluJr4	SINE/Alu	(0)	312	6	2584277
229	29.3	17.6	0.6	chr3	58434127	58434291	(139861268)	C	L3	LINE/CR1	(15)	4084	3886	2586005
3495	7.1	2.4	0.0	chr3	58434581	58435032	(139860527)	C	LTR2	LTR/ERV1	(0)	463	1	2586007
425	22.1	8.7	0.0	chr3	60551349	60551443	(137744116)	+	AluJb	SINE/Alu	2	105	(207)	2589172
22	11.9	0.0	0.0	chr3	60551444	60551480	(137744079)	+	(GAAA)n	Simple_repeat	1	37	(0)	2589173
57	13.4	3.9	3.8	chr3	60551474	60551605	(137743954)	+	G-rich	Low_complexity	1	132	(0)	2589174
892	20.0	1.2	0.0	chr3	60551608	60551767	(137743792)	+	AluJb	SINE/Alu	131	292	(20)	2589172
10994	5.5	0.4	7.8	chr3	61392943	61394436	(136901123)	C	SVA_B	Retroposon/SVA	(0)	1383	1	2590482
2032	13.9	0.7	0.0	chr3	61394561	61394840	(136900719)	+	AluSz	SINE/Alu	24	305	(7)	2590483
3900	15.5	11.4	4.1	chr3	62168515	62169275	(136126284)	C	LTR1B	LTR/ERV1	(0)	824	1	2591876
14	14.6	0.0	3.1	chr3	63912111	63912142	(134383417)	+	(CGGA)n	Simple_repeat	1	32	(0)	2594888
311	31.0	1.6	3.0	chr3	64489669	64489875	(133805684)	+	MIR	SINE/MIR	35	242	(26)	2595830
653	29.3	1.1	0.0	chr3	64837080	64837253	(133458306)	C	MIRb	SINE/MIR	(8)	260	85	2596435
411	25.2	1.9	0.0	chr3	64837274	64837376	(133458183)	C	MER81	DNA/hAT-Blackjack	(7)	107	3	2596436
931	28.1	15.4	5.1	chr3	65071880	65072329	(133223230)	C	MLT1K	LTR/ERVL-MaLR	(71)	524	20	2596848
1468	16.7	1.8	9.0	chr3	65855298	65855597	(132439962)	+	AluJr	SINE/Alu	1	278	(34)	2598140
20	27.1	6.2	1.2	chr3	65855598	65855678	(132439881)	+	GA-rich	Low_complexity	1	86	(0)	2598141
28	18.3	2.9	1.4	chr3	65855639	65855708	(132439851)	+	A-rich	Low_complexity	1	72	(0)	2598142
641	27.4	3.8	3.8	chr3	66037088	66037296	(132258263)	+	MIRb	SINE/MIR	57	265	(3)	2598517
7217	7.3	12.8	4.0	chr3	66897723	66898872	(131396687)	+	MER11A	LTR/ERVK	1	1266	(0)	2600070
22317	9.0	0.8	0.1	chr3	66898873	66900305	(131395254)	+	L1PA8	LINE/L1	5040	6484	(3)	2600069
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
12	19.6	0.0	0.0	chr3	67654708	67654736	(130640823)	+	(GGCCG)n	Simple_repeat	1	29	(0)	2601161
19	12.1	0.0	4.9	chr3	69542707	69542747	(128752812)	+	G-rich	Low_complexity	1	41	(0)	2604353
18	20.0	7.8	0.0	chr3	71583025	71583088	(126712471)	+	(GCGCCCC)n	Simple_repeat	1	69	(0)	2607451
12	22.1	0.0	0.0	chr3	71583359	71583390	(126712169)	+	GA-rich	Low_complexity	1	32	(0)	2607452
30	19.1	0.0	0.0	chr3	71583424	71583478	(126712081)	+	(T)n	Simple_repeat	1	55	(0)	2607453
296	30.2	10.8	3.2	chr3	71753086	71753273	(126542286)	+	MIRb	SINE/MIR	41	244	(24)	2607755
41	4.5	0.0	0.0	chr3	71753648	71753693	(126541866)	+	(GCG)n	Simple_repeat	1	46	(0)	2607756
4455	15.6	10.1	1.6	chr3	71860762	71861512	(126434047)	+	LTR1B	LTR/ERV1	1	822	(2)	2607969
1173	20.2	8.2	12.9	chr3	72154668	72154846	(126140713)	+	MLT1B	LTR/ERVL-MaLR	2	181	(209)	2608586
37	11.4	0.0	0.0	chr3	72154847	72154905	(126140654)	+	(CT)n	Simple_repeat	1	59	(0)	2608587
1173	20.2	8.2	12.9	chr3	72154906	72155135	(126140424)	+	MLT1B	LTR/ERVL-MaLR	182	390	(0)	2608586
14	33.7	1.2	2.4	chr3	72446952	72447032	(125848527)	+	G-rich	Low_complexity	1	82	(0)	2609147
17	20.9	2.3	0.0	chr3	72447033	72447076	(125848483)	+	(CTCC)n	Simple_repeat	1	45	(0)	2609148
386	34.9	12.5	5.4	chr3	74089492	74090250	(124205309)	+	L2c	LINE/L2	2407	3221	(166)	2612274
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
4245	17.8	3.8	5.8	chr3	77247847	77248764	(121046795)	+	LTR1D1	LTR/ERV1	1	899	(0)	2616623
16	0.0	0.0	0.0	chr3	77248778	77248795	(121046764)	+	(T)n	Simple_repeat	1	18	(0)	2616624
10324	28.4	6.9	6.0	chr3	79855742	79860265	(118435294)	+	ERV3-16A3_I-int	LTR/ERVL	658	5226	(0)	2619992
547	32.2	3.9	0.0	chr3	79860266	79860439	(118435120)	+	ERV3-16A3_LTR	LTR/ERVL	1	181	(241)	2619992
459	29.6	8.4	2.1	chr3	79860444	79860633	(118434926)	+	ERV3-16A3_LTR	LTR/ERVL	128	330	(92)	2619993
5097	11.9	3.1	0.8	chr3	81781919	81782680	(116512879)	+	LTR17	LTR/ERV1	1	780	(0)	2622567
949	20.3	10.3	4.9	chr3	83514889	83514917	(114780642)	C	L1MB8	LINE/L1	(316)	5862	5843	2624675
5977	6.5	1.3	1.4	chr3	83514918	83515698	(114779861)	+	LTR17	LTR/ERV1	1	780	(0)	2624677
4884	10.8	5.4	1.1	chr3	86411595	86412340	(111883219)	+	LTR17	LTR/ERV1	1	780	(0)	2628253
22	29.5	2.3	1.1	chr3	86990760	86990847	(111304712)	+	(GCC)n	Simple_repeat	1	90	(0)	2628965
1844	12.0	5.5	12.3	chr3	87633783	87633946	(110661613)	+	THE1B	LTR/ERVL-MaLR	2	182	(182)	2629770
87	0.0	4.4	0.0	chr3	87633947	87634037	(110661522)	+	(CTCTCCCCCT)n	Simple_repeat	1	95	(0)	2629771
1844	12.0	5.5	12.3	chr3	87634038	87634263	(110661296)	+	THE1B	LTR/ERVL-MaLR	183	364	(0)	2629770
4117	5.3	0.2	0.6	chr3	87945853	87946379	(110349180)	C	LTR17	LTR/ERV1	(0)	780	256	2630151
14	14.2	0.0	5.7	chr3	88058632	88058666	(110236893)	+	(GGC)n	Simple_repeat	1	35	(0)	2630310
23	22.5	4.5	3.3	chr3	88058915	88059002	(110236557)	+	(CCG)n	Simple_repeat	1	92	(0)	2630311
6583	25.0	4.0	6.0	chr3	88526100	88529557	(109766002)	C	L1PA8A	LINE/L1	(3105)	3378	1	2630943
289	36.9	3.2	0.0	chr3	88583362	88583483	(109712076)	+	MIRb	SINE/MIR	23	148	(120)	2631017
36	14.4	4.3	0.0	chr3	88583519	88583605	(109711954)	+	(GT)n	Simple_repeat	1	90	(0)	2631018
8018	6.6	21.8	0.2	chr3	93917432	93918668	(104376891)	+	LTR12C	LTR/ERV1	1	1579	(0)	2633535
34	8.4	2.8	5.4	chr3	94043535	94043606	(104251953)	+	(CCCTCC)n	Simple_repeat	1	74	(0)	2633743
8098	5.9	0.2	25.4	chr3	94043607	94045460	(104250099)	+	SVA_A	Retroposon/SVA	1	1387	(0)	2633744
540	28.6	10.8	1.2	chr3	94371373	94371650	(103923909)	C	L1PA10	LINE/L1	(5812)	973	629	2634226
6779	8.2	17.1	0.5	chr3	94859893	94860946	(103434613)	+	MER11A	LTR/ERVK	1	1266	(0)	2634808
15917	15.3	6.9	1.9	chr3	94860947	94862716	(103432843)	C	L1PA16	LINE/L1	(3367)	3482	1647	2634805
20	20.4	0.0	0.0	chr3	96814782	96814826	(101480733)	+	GA-rich	Low_complexity	1	45	(0)	2637044
13	13.6	2.9	2.9	chr3	97821959	97821992	(100473567)	+	G-rich	Low_complexity	1	35	(0)	2638281
11690	13.3	6.9	2.1	chr3	98186916	98188946	(100106613)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	409	2638692
5097	8.8	2.2	7.0	chr3	98836460	98839024	(99456535)	C	SVA_F	Retroposon/SVA	(367)	1008	58	2639522
25	23.8	4.4	1.1	chr3	98901145	98901234	(99394325)	+	(AGGAGC)n	Simple_repeat	1	94	(0)	2639604
14	28.2	0.0	1.9	chr3	98901217	98901273	(99394286)	+	G-rich	Low_complexity	1	55	(0)	2639605
13	16.9	3.0	0.0	chr3	98901541	98901573	(99393986)	+	GA-rich	Low_complexity	1	34	(0)	2639606
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
10209	11.4	0.6	8.3	chr3	99444588	99446300	(98849259)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2640261
1938	15.5	4.1	6.7	chr3	99446301	99446468	(98849091)	+	THE1B	LTR/ERVL-MaLR	1	169	(195)	2640261
2400	9.0	0.0	0.3	chr3	99446469	99446767	(98848792)	+	AluY	SINE/Alu	1	298	(13)	2640262
11087	15.9	0.1	0.1	chr3	99804433	99806064	(98489495)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2640736
34	22.2	1.6	5.7	chr3	100709847	100709968	(97585591)	+	GA-rich	Low_complexity	1	124	(0)	2642107
3125	14.8	12.0	0.9	chr3	103158118	103158664	(95136895)	C	MER51A	LTR/ERV1	(18)	616	1	2645476
273	31.6	5.0	2.2	chr3	103158665	103158798	(95136761)	C	LTR33C	LTR/ERVL	(36)	593	456	2645477
393	10.8	1.5	0.0	chr3	103829875	103829939	(94465620)	+	L1MA9	LINE/L1	6247	6312	(0)	2646315
20	26.8	2.4	3.5	chr3	103830065	103830147	(94465412)	+	(CTT)n	Simple_repeat	1	85	(0)	2646316
17677	8.8	1.2	0.7	chr3	105389583	105392925	(92902634)	C	L1PA10	LINE/L1	(5)	6163	2804	2648212
824	16.9	1.9	0.0	chr3	106085989	106086142	(92209417)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	209	2649073
2180	16.9	3.9	0.0	chr3	106086149	106086563	(92208996)	C	MER72B	LTR/ERV1	(8)	760	329	2649074
731	8.6	0.8	0.0	chr3	106086583	106086698	(92208861)	C	LTR9B	LTR/ERV1	(84)	560	444	2649075
1700	17.1	2.9	4.0	chr3	106086697	106086894	(92208665)	C	MER72B	LTR/ERV1	(424)	344	156	2649074
2345	10.3	0.0	0.0	chr3	109618610	109618899	(88676660)	+	AluSx4	SINE/Alu	2	291	(19)	2654184
17	17.6	0.0	4.7	chr3	109618900	109618915	(88676644)	+	(AT)n	Simple_repeat	1	16	(0)	2654185
94	10.8	0.0	3.1	chr3	109619010	109619170	(88676389)	+	(TTCCC)n	Simple_repeat	1	161	(0)	2654186
454	28.5	16.0	3.9	chr3	109619220	109619449	(88676110)	C	L2c	LINE/L2	(83)	3304	3042	2654187
2853	23.2	3.5	3.9	chr3	110239876	110240587	(88054972)	C	MER72	LTR/ERV1	(9)	713	5	2655012
6385	23.2	4.1	2.5	chr3	110240588	110242056	(88053503)	C	MER21-int	LTR/ERVL	(523)	3668	2175	2655011
12	31.8	0.0	1.9	chr3	111070813	111070865	(87224694)	+	GA-rich	Low_complexity	1	53	(0)	2656043
19	29.8	1.2	2.4	chr3	111071764	111071844	(87223715)	+	(GGC)n	Simple_repeat	1	82	(0)	2656044
21	22.7	0.0	0.0	chr3	111071965	111072015	(87223544)	+	G-rich	Low_complexity	1	51	(0)	2656045
16	14.7	0.0	0.0	chr3	111072131	111072160	(87223399)	+	(GCT)n	Simple_repeat	1	30	(0)	2656046
5038	13.5	0.3	0.6	chr3	111497020	111497802	(86797757)	C	LTR17	LTR/ERV1	(0)	780	1	2656576
337	30.9	3.0	1.0	chr3	113677882	113677979	(84617580)	+	MER5A	DNA/hAT-Charlie	59	158	(31)	2659550
26	0.0	0.0	0.0	chr3	113677983	113678007	(84617552)	+	(CTCCC)n	Simple_repeat	1	25	(0)	2659551
12	12.2	3.7	0.0	chr3	113678059	113678085	(84617474)	+	(CTTT)n	Simple_repeat	1	28	(0)	2659552
243	23.2	12.5	0.0	chr3	113678112	113678167	(84617392)	+	MER5A	DNA/hAT-Charlie	101	164	(25)	2659553
193	26.8	5.1	0.0	chr3	113678129	113678184	(84617375)	C	MER5B	DNA/hAT-Charlie	(114)	64	6	2659554
16	13.2	0.0	9.8	chr3	113696289	113696339	(84599220)	+	(CCGCCC)n	Simple_repeat	1	51	(0)	2659586
18	20.7	4.2	4.0	chr3	113696340	113696359	(84599200)	+	(GCCGCCC)n	Simple_repeat	2	75	(0)	2659587
18	17.7	0.0	0.0	chr3	113696645	113696676	(84598883)	+	(C)n	Simple_repeat	1	32	(0)	2659588
2360	9.6	0.3	1.3	chr3	113838290	113838592	(84456967)	+	AluSq2	SINE/Alu	1	300	(13)	2659864
22	10.0	4.7	0.0	chr3	113838845	113838887	(84456672)	+	(GGTGC)n	Simple_repeat	1	45	(0)	2659865
2783	4.2	0.7	2.2	chr3	113884551	113884863	(84410696)	+	AluY	SINE/Alu	1	308	(3)	2659946
3748	14.7	3.8	16.5	chr3	113884864	113884875	(84410684)	+	L1M4	LINE/L1	3582	3593	(3051)	2659943
20	32.6	2.8	1.8	chr3	113884886	113884991	(84410568)	+	(CTCCCCC)n	Simple_repeat	1	109	(0)	2659947
16	23.3	1.9	1.9	chr3	115146880	115146931	(83148628)	+	(TCCC)n	Simple_repeat	1	53	(0)	2661717
29	0.0	0.0	3.1	chr3	115146983	115147014	(83148545)	+	(GGGGC)n	Simple_repeat	1	32	(0)	2661718
13	30.1	0.0	2.0	chr3	115147076	115147126	(83148433)	+	(CCCCA)n	Simple_repeat	1	51	(0)	2661719
197	38.0	1.8	4.4	chr3	115518840	115518952	(82776607)	+	MIR3	SINE/MIR	22	131	(77)	2662219
13	21.8	2.6	0.0	chr3	117753545	117753582	(80541977)	+	A-rich	Low_complexity	1	39	(0)	2665330
257	26.4	0.0	2.7	chr3	117860030	117860103	(80435456)	+	L2a	LINE/L2	2333	2404	(1015)	2665467
2004	23.1	7.6	1.0	chr3	117860148	117860637	(80434922)	+	MLT1F	LTR/ERVL-MaLR	1	525	(23)	2665468
3472	15.8	11.5	0.7	chr3	119042171	119042891	(79252668)	+	L1PB1	LINE/L1	384	1192	(5671)	2667038
1829	10.3	7.2	0.3	chr3	119042892	119043174	(79252385)	C	LTR17	LTR/ERV1	(0)	780	477	2667039
2296	6.7	3.4	0.0	chr3	119043163	119043478	(79252081)	C	LTR17	LTR/ERV1	(453)	327	1	2667039
9046	12.1	3.1	1.3	chr3	119043479	119045121	(79250438)	+	L1PB1	LINE/L1	1189	2920	(3964)	2667038
1070	24.2	10.2	7.8	chr3	119801621	119802144	(78493415)	C	MLT1H1	LTR/ERVL-MaLR	(2)	553	20	2668197
2626	15.6	0.7	7.7	chr3	120045756	120046367	(78249192)	+	L1MC2	LINE/L1	5669	6237	(107)	2668529
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
12	8.8	4.2	0.0	chr3	120094347	120094370	(78201189)	+	(TCCT)n	Simple_repeat	1	25	(0)	2668616
19	0.0	0.0	0.0	chr3	120094385	120094408	(78201151)	+	(GGC)n	Simple_repeat	1	24	(0)	2668617
19	18.3	0.0	5.5	chr3	120094480	120094485	(78201074)	+	(TCCCCC)n	Simple_repeat	1	54	(0)	2668618
22	11.7	4.2	2.0	chr3	120094486	120094533	(78201026)	+	(CTC)n	Simple_repeat	1	50	(0)	2668619
6322	7.6	20.0	5.6	chr3	120116272	120117344	(78178215)	+	MER11A	LTR/ERVK	1	1266	(0)	2668661
2041	25.5	6.1	3.8	chr3	120309530	120309544	(77986015)	C	L1MEj	LINE/L1	(693)	1467	1457	2668967
4062	15.9	2.6	0.0	chr3	120309545	120310171	(77985388)	C	LTR9D	LTR/ERV1	(0)	645	2	2668968
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
12	18.6	0.0	7.1	chr3	120451293	120451334	(77844225)	+	(GGC)n	Simple_repeat	1	42	(0)	2669169
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
13	15.9	1.4	12.3	chr3	120908723	120908794	(77386765)	+	(GCGGCG)n	Simple_repeat	1	73	(0)	2669852
26	25.8	2.5	4.8	chr3	120908767	120908887	(77386672)	+	G-rich	Low_complexity	1	124	(0)	2669853
20	10.1	0.0	0.0	chr3	124033192	124033223	(74262336)	+	(GGC)n	Simple_repeat	1	32	(0)	2674684
47	22.1	1.7	0.0	chr3	124033219	124033333	(74262226)	+	GA-rich	Low_complexity	1	117	(0)	2674685
16	9.0	0.0	9.3	chr3	124033430	124033472	(74262087)	+	(GCCCCG)n	Simple_repeat	1	43	(0)	2674686
20	12.0	0.0	2.6	chr3	125357252	125357289	(72938270)	+	(CTC)n	Simple_repeat	1	38	(0)	2676846
18	15.7	4.7	0.0	chr3	125357301	125357343	(72938216)	+	(CGCA)n	Simple_repeat	1	45	(0)	2676847
20	20.0	3.4	1.6	chr3	125375018	125375029	(72920530)	+	(CCGCCC)n	Simple_repeat	1	36	(25)	2676880
19	22.6	0.0	0.0	chr3	125375030	125375070	(72920489)	+	(C)n	Simple_repeat	1	41	(0)	2676881
20	20.0	3.4	1.6	chr3	125375071	125375076	(72920483)	+	(CCGCCC)n	Simple_repeat	37	61	(0)	2676880
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
13	20.3	2.4	2.3	chr3	125595688	125595729	(72699830)	+	G-rich	Low_complexity	1	43	(0)	2677363
21	0.0	0.0	0.0	chr3	125683432	125683454	(72612105)	+	(A)n	Simple_repeat	1	23	(0)	2677538
15	22.6	2.9	5.6	chr3	125916098	125916166	(72379393)	+	(GCCCTG)n	Simple_repeat	1	71	(0)	2677883
16	22.1	2.6	6.3	chr3	126083943	126084019	(72211540)	+	(CGCCCGG)n	Simple_repeat	1	79	(0)	2678108
13	17.8	5.3	0.0	chr3	126213108	126213145	(72082414)	+	(CCCCT)n	Simple_repeat	1	40	(0)	2678260
12	10.9	0.0	8.6	chr3	126415854	126415888	(71879671)	+	(GGAGT)n	Simple_repeat	1	35	(0)	2678556
323	27.6	15.8	1.4	chr3	126568052	126568327	(71727232)	+	MamGypLTR3	LTR/Gypsy	446	768	(126)	2678789
3847	16.9	10.1	3.1	chr3	126814306	126815107	(71480452)	+	MER21B	LTR/ERVL	1	864	(4)	2679115
3760	18.7	1.5	7.8	chr3	127095009	127095905	(71199654)	C	L1MB2	LINE/L1	(497)	5674	4827	2679500
420	30.2	7.1	0.0	chr3	127095920	127096101	(71199458)	+	LTR16C	LTR/ERVL	261	456	(33)	2679498
782	13.2	0.0	0.0	chr3	127096098	127096203	(71199356)	C	AluJo	SINE/Alu	(206)	106	1	2679503
356	32.7	5.1	3.3	chr3	127096234	127096486	(71199073)	C	MIRb	SINE/MIR	(2)	266	11	2679504
15	23.1	1.6	4.8	chr3	127547478	127547538	(70748021)	+	G-rich	Low_complexity	1	62	(0)	2680226
89	19.5	2.2	2.6	chr3	127547665	127547888	(70747671)	+	(CCCCT)n	Simple_repeat	1	229	(0)	2680227
690	19.6	0.0	1.9	chr3	128010662	128010822	(70284737)	+	Ricksha_c	DNA/MULE-MuDR	1878	2035	(13)	2681051
542	24.4	7.0	0.0	chr3	128010717	128010876	(70284683)	C	Ricksha_c	DNA/MULE-MuDR	(1874)	174	3	2681052
30	31.0	2.9	0.0	chr3	128010889	128010991	(70284568)	+	(GT)n	Simple_repeat	1	106	(0)	2681053
377	28.6	5.2	1.3	chr3	128010993	128011141	(70284418)	+	MER67C	LTR/ERV1	7	161	(550)	2681054
432	19.9	19.9	0.0	chr3	128011154	128011334	(70284225)	C	LTR8B	LTR/ERV1	(64)	756	531	2681055
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
2177	12.3	0.7	0.0	chr3	129027674	129027982	(69267577)	+	AluSx1	SINE/Alu	1	311	(1)	2682902
19	0.0	0.0	0.0	chr3	129829453	129829473	(68466086)	+	(A)n	Simple_repeat	1	21	(0)	2684477
5290	6.5	1.6	0.1	chr3	129901749	129902412	(68393147)	+	HERVK9-int	LTR/ERVK	1	674	(5347)	2684629
16	14.2	4.7	7.5	chr3	130894016	130894079	(67401480)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	2686147
24	10.6	0.0	8.3	chr3	130894131	130894190	(67401369)	+	(CCCT)n	Simple_repeat	1	60	(0)	2686148
19	18.6	9.2	1.2	chr3	130894191	130894204	(67401355)	+	(TCCTC)n	Simple_repeat	3	83	(0)	2686149
12	15.6	3.5	0.0	chr3	130894668	130894696	(67400863)	+	(CTC)n	Simple_repeat	1	30	(0)	2686150
2059	12.6	0.7	0.0	chr3	132044228	132044504	(66251055)	+	AluSz	SINE/Alu	1	279	(33)	2687860
225	20.4	2.2	2.3	chr3	132044509	132045054	(66250505)	+	GA-rich	Low_complexity	1	558	(0)	2687861
14	19.7	4.2	2.0	chr3	132417559	132417606	(65877953)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	2688441
1590	26.1	4.5	2.8	chr3	132554640	132555139	(65740420)	C	L2a	LINE/L2	(0)	3426	2918	2688616
11	27.7	0.0	0.0	chr3	132660552	132660590	(65634969)	+	(GGAGCG)n	Simple_repeat	1	39	(0)	2688747
744	29.7	8.9	4.9	chr3	133425357	133425788	(64869771)	C	LTR78	LTR/ERV1	(3)	1301	851	2689871
13	35.3	2.6	5.0	chr3	133425795	133425910	(64869649)	+	A-rich	Low_complexity	1	119	(0)	2689872
97	16.2	5.4	0.4	chr3	133425911	133425943	(64869616)	+	GA-rich	Low_complexity	18	122	(113)	2689873
18	23.0	0.0	0.0	chr3	133425944	133425980	(64869579)	+	G-rich	Low_complexity	1	37	(0)	2689874
97	16.2	5.4	0.4	chr3	133425981	133426011	(64869548)	+	GA-rich	Low_complexity	123	235	(0)	2689873
430	33.5	0.7	0.7	chr3	133426012	133426161	(64869398)	C	LTR78	LTR/ERV1	(421)	883	734	2689871
746	25.4	6.0	4.3	chr3	134223355	134223728	(64071831)	C	MER113	DNA/hAT-Charlie	(79)	442	62	2691096
1340	14.1	2.7	10.8	chr3	134328676	134329000	(63966559)	C	L1MA8	LINE/L1	(0)	6291	5994	2691299
63	14.5	0.9	0.9	chr3	134329105	134329217	(63966342)	+	(CTCCC)n	Simple_repeat	1	114	(0)	2691300
2179	12.5	0.0	1.0	chr3	134329220	134329523	(63966036)	C	AluSx4	SINE/Alu	(9)	301	1	2691301
11	22.4	1.9	5.7	chr3	134406797	134406848	(63888711)	+	(CAGGCTG)n	Simple_repeat	1	53	(0)	2691410
12	11.1	3.2	3.1	chr3	135965575	135965605	(62329954)	+	G-rich	Low_complexity	1	32	(0)	2693591
333	32.5	11.8	5.3	chr3	135965611	135965668	(62329891)	C	L1MEc	LINE/L1	(6337)	530	465	2693576
28	3.3	0.0	0.0	chr3	135965669	135965699	(62329860)	+	(GAG)n	Simple_repeat	1	31	(0)	2693592
333	32.5	11.8	5.3	chr3	135965700	135965939	(62329620)	C	L1MEc	LINE/L1	(6403)	464	210	2693576
17	17.2	4.2	2.0	chr3	135965941	135965988	(62329571)	+	(GGCCG)n	Simple_repeat	1	50	(0)	2693593
18	4.0	0.0	0.0	chr3	135966037	135966062	(62329497)	+	(CGGTG)n	Simple_repeat	1	26	(0)	2693594
11	22.5	2.2	4.3	chr3	136195597	136195642	(62099917)	+	(GGCGGC)n	Simple_repeat	1	47	(0)	2693943
11620	6.2	3.3	5.7	chr3	138484474	138486090	(59809469)	+	LTR12C	LTR/ERV1	3	1579	(0)	2697616
19031	10.1	4.0	3.7	chr3	138486091	138486107	(59809452)	C	L1MA2	LINE/L1	(895)	6670	6660	2697615
6013	5.7	21.4	15.0	chr3	138486108	138487277	(59808282)	C	MER11A	LTR/ERVK	(0)	1266	1	2697617
2167	11.4	0.0	0.0	chr3	138488208	138488488	(59807071)	+	AluSq2	SINE/Alu	1	281	(32)	2697618
32	3.0	0.0	0.0	chr3	138488494	138488527	(59807032)	+	(GAGGGG)n	Simple_repeat	1	34	(0)	2697619
19031	10.1	4.0	3.7	chr3	138488528	138488543	(59807016)	C	L1MA2	LINE/L1	(1819)	5746	5746	2697615
2434	6.7	0.0	1.0	chr3	138488544	138488840	(59806719)	C	AluY	SINE/Alu	(16)	295	2	2697620
7268	6.6	15.3	2.0	chr3	138545179	138546269	(59749290)	+	MER11A	LTR/ERVK	1	1262	(4)	2697702
4538	15.1	1.6	2.2	chr3	138546270	138546308	(59749251)	+	L1MA4	LINE/L1	7678	7714	(5)	2697692
3935	18.1	3.2	4.6	chr3	138676023	138677015	(59618544)	+	L1MB8	LINE/L1	5689	6663	(13)	2697907
285	17.5	1.2	12.1	chr3	138677011	138677058	(59618501)	+	L1MEd	LINE/L1	1479	1521	(5565)	2697910
2193	10.7	0.7	0.7	chr3	138677059	138677357	(59618202)	C	AluSq2	SINE/Alu	(14)	299	1	2697911
18	17.6	6.7	0.0	chr3	138834892	138834936	(59460623)	+	(GC)n	Simple_repeat	1	48	(0)	2698265
19	4.0	0.0	0.0	chr3	138835008	138835033	(59460526)	+	(GCG)n	Simple_repeat	1	26	(0)	2698266
42	4.3	0.0	0.0	chr3	138916148	138916195	(59379364)	+	(CAGCCCA)n	Simple_repeat	1	48	(0)	2698511
824	18.0	15.5	3.2	chr3	139319851	139320103	(58975456)	+	LTR50	LTR/ERVL	2	291	(504)	2699140
238	27.7	4.7	0.0	chr3	139320155	139320255	(58975304)	+	LTR50	LTR/ERVL	504	609	(186)	2699141
565	18.1	5.0	1.5	chr3	139320257	139320391	(58975168)	C	L1M	LINE/L1	(773)	5406	5267	2699142
241	22.9	21.3	0.0	chr3	139320392	139320509	(58975050)	+	LTR50	LTR/ERVL	621	770	(25)	2699141
2351	27.5	8.0	0.6	chr3	141011658	141012378	(57283181)	+	MER20B	DNA/hAT-Charlie	1	779	(4)	2701629
735	21.8	0.6	1.2	chr3	141187903	141188069	(57107490)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	2701919
12	21.0	3.6	5.3	chr3	141231886	141231940	(57063619)	+	G-rich	Low_complexity	1	57	(0)	2701980
35	15.0	4.2	4.0	chr3	141486916	141487011	(56808548)	+	G-rich	Low_complexity	1	100	(0)	2702372
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
2437	5.8	0.3	0.0	chr3	142225760	142226051	(56069508)	C	AluSg	SINE/Alu	(16)	294	2	2703769
11	15.3	11.4	0.0	chr3	142723949	142723992	(55571567)	+	(CCGCAGGCC)n	Simple_repeat	1	49	(0)	2704607
19	15.0	0.0	0.0	chr3	142724476	142724512	(55571047)	+	G-rich	Low_complexity	1	37	(0)	2704608
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
2931	23.7	21.2	2.4	chr3	143185341	143187011	(55108548)	C	L2a	LINE/L2	(0)	3426	1279	2705321
1697	26.2	12.6	1.7	chr3	143187013	143187610	(55107949)	C	L2a	LINE/L2	(2737)	682	10	2705321
14	26.8	3.2	6.1	chr3	143971700	143971794	(54323765)	+	(CCGCTC)n	Simple_repeat	1	98	(0)	2706423
15	16.6	0.0	0.0	chr3	143971976	143972002	(54323557)	+	(GC)n	Simple_repeat	1	27	(0)	2706424
12	6.9	5.9	5.6	chr3	146544852	146544885	(51750674)	+	(GGAACT)n	Simple_repeat	1	36	(0)	2709708
16	10.3	0.0	5.7	chr3	146545042	146545076	(51750483)	+	(TTTC)n	Simple_repeat	1	35	(0)	2709709
70	30.7	1.6	2.0	chr3	147679236	147679467	(50616092)	+	(TCTCC)n	Simple_repeat	3	233	(0)	2711107
1573	20.9	3.1	0.4	chr3	147679468	147679745	(50615814)	C	AluJr	SINE/Alu	(26)	286	1	2711108
9059	6.4	12.1	11.2	chr3	149096853	149098414	(49197145)	C	LTR12C	LTR/ERV1	(0)	1579	2	2713058
4444	15.9	10.2	2.9	chr3	149586460	149587322	(48708237)	+	MER21C	LTR/ERVL	1	933	(5)	2713861
15	17.7	0.0	0.0	chr3	150546396	150546427	(47749132)	+	(CGC)n	Simple_repeat	1	32	(0)	2715401
75	8.3	0.0	0.0	chr3	150703722	150703823	(47591736)	+	(CTC)n	Simple_repeat	1	102	(0)	2715698
597	18.0	12.0	1.2	chr3	150853992	150854154	(47441405)	+	L1M5	LINE/L1	5126	5308	(838)	2715953
547	16.0	0.0	5.3	chr3	150854155	150854248	(47441311)	+	FLAM_A	SINE/Alu	42	130	(12)	2715954
4173	7.3	0.6	0.0	chr3	150854256	150854777	(47440782)	+	LTR17	LTR/ERV1	256	780	(0)	2715955
16	0.0	0.0	0.0	chr3	151086481	151086497	(47209062)	+	(T)n	Simple_repeat	1	17	(0)	2716326
15	9.2	8.6	0.0	chr3	151086804	151086838	(47208721)	+	(AGCG)n	Simple_repeat	1	38	(0)	2716327
1564	19.4	1.3	4.4	chr3	151795773	151796087	(46499472)	+	AluJo	SINE/Alu	1	305	(7)	2717277
65	10.3	0.0	4.3	chr3	151796140	151796256	(46499303)	+	(AGGGG)n	Simple_repeat	1	117	(0)	2717278
274	35.5	9.9	3.9	chr3	152472344	152472654	(45822905)	C	L2b	LINE/L2	(15)	3360	3029	2718237
51	17.7	4.2	3.3	chr3	153055783	153055926	(45239633)	+	GA-rich	Low_complexity	1	150	(0)	2719114
30	3.1	0.0	0.0	chr3	153055928	153055960	(45239599)	+	(AGGG)n	Simple_repeat	1	33	(0)	2719115
196	29.8	1.7	0.0	chr3	153055992	153056048	(45239511)	+	L2	LINE/L2	2712	2769	(650)	2719116
5436	10.0	10.1	3.0	chr3	153874245	153875323	(44420236)	C	MER11A	LTR/ERVK	(0)	1266	6	2720376
36	2.9	0.0	0.0	chr3	154430123	154430157	(43865402)	+	(GA)n	Simple_repeat	1	35	(0)	2721162
1969	22.6	2.1	4.6	chr3	156012808	156013303	(42282256)	+	L1MB7	LINE/L1	4570	5052	(1094)	2723440
2183	9.6	1.7	4.0	chr3	156137553	156137855	(42157704)	C	AluSx1	SINE/Alu	(16)	296	1	2723628
339	32.0	5.7	3.4	chr3	156408289	156408495	(41887064)	+	MIRb	SINE/MIR	7	218	(50)	2723997
3636	6.1	0.9	0.0	chr3	157587548	157588006	(40707553)	C	LTR2	LTR/ERV1	(0)	463	1	2725686
1493	10.1	0.5	0.5	chr3	157588010	157588227	(40707332)	+	MLT2A1	LTR/ERVL	183	400	(44)	2725685
28	14.5	6.8	2.6	chr3	157588232	157588304	(40707255)	+	(TA)n	Simple_repeat	1	78	(0)	2725687
34	27.5	1.6	2.4	chr3	158105768	158105890	(40189669)	+	(CCG)n	Simple_repeat	1	125	(0)	2726362
12	13.8	4.4	6.4	chr3	159765903	159765947	(38529612)	+	G-rich	Low_complexity	1	47	(0)	2728703
13615	17.3	4.4	2.0	chr3	160113982	160116404	(38179155)	+	L1PA8	LINE/L1	14	2504	(5061)	2729302
17	23.0	0.0	0.0	chr3	160755990	160756030	(37539529)	+	(GCT)n	Simple_repeat	1	41	(0)	2730312
1168	19.2	4.0	0.0	chr3	164148380	164148618	(34146941)	+	MER50	LTR/ERV1	1	249	(485)	2734579
1697	15.9	16.0	0.8	chr3	164148619	164148979	(34146580)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	2734581
9439	15.3	0.9	3.1	chr3	164148987	164150556	(34145003)	C	MSTA-int	LTR/ERVL-MaLR	(5)	1626	92	2734581
6090	5.6	2.2	0.0	chr3	167503333	167504095	(30791464)	C	LTR17	LTR/ERV1	(0)	780	1	2738785
482	24.2	7.5	0.7	chr3	168082081	168082230	(30213329)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	7	2739578
1625	26.7	8.8	7.0	chr3	169487071	169488244	(28807315)	+	L1MEd	LINE/L1	1513	2675	(3471)	2741380
13	25.5	5.5	2.6	chr3	169662638	169662710	(28632849)	+	(CGCAG)n	Simple_repeat	1	77	(0)	2741632
14	19.7	5.6	5.3	chr3	169662977	169662989	(28632570)	+	(TCTCC)n	Simple_repeat	1	73	(0)	2741633
12	24.7	3.6	3.5	chr3	169662990	169663045	(28632514)	+	(TCCC)n	Simple_repeat	1	58	(0)	2741634
1866	11.1	6.4	1.4	chr3	169763178	169763457	(28532102)	+	AluSx	SINE/Alu	7	301	(11)	2741778
186	26.2	0.0	0.0	chr3	169763475	169763516	(28532043)	C	MIRc	SINE/MIR	(133)	135	94	2741779
201	30.5	9.4	8.1	chr3	169812781	169813001	(28482558)	C	L2b	LINE/L2	(45)	3330	3107	2741848
19	7.4	0.0	0.0	chr3	169966949	169966977	(28328582)	+	(GGGTG)n	Simple_repeat	1	29	(0)	2742120
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
13	14.4	3.2	0.0	chr3	170357188	170357218	(27938341)	+	G-rich	Low_complexity	1	32	(0)	2742885
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
1030	19.2	0.0	0.6	chr3	171763277	171763448	(26532111)	+	AluJb	SINE/Alu	138	308	(4)	2745038
74	7.0	1.9	0.0	chr3	171763451	171763557	(26532002)	+	(GGAGG)n	Simple_repeat	1	109	(0)	2745039
16	14.2	0.0	0.0	chr3	171810484	171810514	(26485045)	+	(GGGA)n	Simple_repeat	1	31	(0)	2745122
184	35.4	1.5	0.0	chr3	171810841	171810905	(26484654)	C	MIRc	SINE/MIR	(121)	147	82	2745123
277	28.2	13.4	0.0	chr3	171810962	171811071	(26484488)	C	MIRb	SINE/MIR	(110)	158	32	2745124
181	27.9	0.0	0.0	chr3	172693164	172693206	(25602353)	+	L2c	LINE/L2	3375	3417	(9)	2746522
19	20.3	0.0	0.0	chr3	173396011	173396046	(24899513)	+	(GT)n	Simple_repeat	1	36	(0)	2747507
18	0.0	0.0	0.0	chr3	173396061	173396083	(24899476)	+	(GGC)n	Simple_repeat	1	23	(0)	2747508
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
31	23.0	3.8	4.3	chr3	177197564	177197618	(21097941)	+	(GCG)n	Simple_repeat	1	52	(0)	2752766
28	5.8	0.0	0.0	chr3	177197619	177197654	(21097905)	+	(CGGG)n	Simple_repeat	1	36	(0)	2752767
31	23.0	3.8	4.3	chr3	177197655	177197731	(21097828)	+	(GCG)n	Simple_repeat	2	80	(0)	2752768
10469	4.2	0.3	8.3	chr3	177412214	177413712	(20881847)	C	SVA_C	Retroposon/SVA	(6)	1378	1	2753211
1734	18.9	4.5	0.3	chr3	177413789	177414111	(20881448)	C	Tigger3	DNA/TcMar-Tigger	(2692)	337	1	2753212
302	14.9	3.4	0.4	chr3	179054488	179054568	(19240991)	+	L1MC4a	LINE/L1	7733	7847	(195)	2755544
3671	5.6	4.2	1.9	chr3	179054591	179055103	(19240456)	+	LTR17	LTR/ERV1	256	780	(0)	2755545
1130	19.0	0.0	0.0	chr3	179261583	179261782	(19033777)	+	Tigger5	DNA/TcMar-Tigger	29	228	(2178)	2755853
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
12	18.0	5.0	2.4	chr3	179323212	179323251	(18972308)	+	(CCG)n	Simple_repeat	1	42	(0)	2755996
23	16.7	7.3	4.8	chr3	179653052	179653169	(18642390)	+	(GCCCGCT)n	Simple_repeat	1	120	(0)	2756626
3685	10.4	2.9	2.0	chr3	180771760	180772737	(17522822)	C	MER11A	LTR/ERVK	(0)	1071	1	2758305
85	29.9	3.0	2.3	chr3	181120414	181120478	(17175081)	+	(TTCCC)n	Simple_repeat	1	339	(0)	2758857
61	29.7	6.1	0.7	chr3	181120479	181120742	(17174817)	+	(CTCT)n	Simple_repeat	1	280	(0)	2758858
16	16.4	2.2	4.3	chr3	181711744	181711788	(16583771)	+	(CCT)n	Simple_repeat	1	46	(0)	2759749
31	0.0	0.0	0.0	chr3	181726992	181727020	(16568539)	+	(T)n	Simple_repeat	1	29	(0)	2759765
30	25.7	2.0	1.9	chr3	183697708	183697772	(14597787)	+	(CCCCG)n	Simple_repeat	1	98	(0)	2763196
16	3.5	9.7	2.9	chr3	183697773	183697803	(14597756)	+	(CG)n	Simple_repeat	1	34	(0)	2763197
34	21.4	2.7	3.5	chr3	183825554	183825663	(14469896)	+	(CCCGCCG)n	Simple_repeat	1	113	(0)	2763464
13	25.9	3.2	3.1	chr3	183884783	183884845	(14410714)	+	(CCACG)n	Simple_repeat	1	65	(0)	2763583
216	32.5	10.9	2.4	chr3	183885151	183885317	(14410242)	C	MIRb	SINE/MIR	(41)	227	45	2763584
189	19.6	0.0	7.5	chr3	184314309	184314369	(13981190)	+	L2c	LINE/L2	3318	3386	(1)	2764431
26	22.0	2.6	6.8	chr3	184379784	184379898	(13915661)	+	(CCTC)n	Simple_repeat	1	118	(0)	2764498
29	37.8	0.0	0.0	chr3	184379899	184379904	(13915655)	+	(CCCCC)n	Simple_repeat	5	125	(0)	2764499
39	23.6	4.3	4.7	chr3	184380083	184380175	(13915384)	+	(CGCC)n	Simple_repeat	1	87	(0)	2764500
31	0.0	0.0	0.0	chr3	184380176	184380204	(13915355)	+	(GCCCCG)n	Simple_repeat	1	29	(0)	2764501
39	23.6	4.3	4.7	chr3	184380205	184380295	(13915264)	+	(CGCC)n	Simple_repeat	4	99	(0)	2764502
13	16.8	0.0	0.0	chr3	184380348	184380374	(13915185)	+	(GCT)n	Simple_repeat	1	27	(0)	2764503
184	35.4	11.0	0.0	chr3	184665366	184665543	(13630016)	+	L2b	LINE/L2	2986	3185	(190)	2765092
396	31.9	3.1	3.6	chr3	184777986	184778180	(13517379)	C	L2c	LINE/L2	(1)	3386	3193	2765303
502	26.8	5.8	0.0	chr3	184778300	184778463	(13517096)	C	MIRc	SINE/MIR	(6)	262	89	2765304
1351	9.0	0.0	2.6	chr3	185236183	185236376	(13059183)	+	MER1B	DNA/hAT-Charlie	87	275	(64)	2766027
467	11.2	0.0	3.6	chr3	185236386	185236468	(13059091)	+	MER1B	DNA/hAT-Charlie	260	339	(0)	2766028
84	15.0	7.2	0.0	chr3	185631424	185631618	(12663941)	+	(CTCC)n	Simple_repeat	1	209	(0)	2766789
21	18.1	6.2	1.5	chr3	185825009	185825072	(12470487)	+	(CTC)n	Simple_repeat	1	68	(0)	2767148
21	23.0	3.4	4.4	chr3	185825048	185825135	(12470424)	+	(CCGC)n	Simple_repeat	1	91	(0)	2767149
17	15.6	0.0	0.0	chr3	185825220	185825248	(12470311)	+	(CT)n	Simple_repeat	1	29	(0)	2767150
11	18.4	2.4	4.8	chr3	185825251	185825291	(12470268)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	2767151
16	18.1	0.0	6.1	chr3	185825360	185825408	(12470151)	+	(CCCCG)n	Simple_repeat	1	49	(0)	2767152
20	21.2	5.8	3.3	chr3	185825409	185825442	(12470117)	+	(GCGCCCC)n	Simple_repeat	5	92	(0)	2767153
21	27.2	1.0	5.8	chr3	185825421	185825523	(12470036)	+	(GCCCGG)n	Simple_repeat	1	104	(0)	2767154
5811	10.7	19.4	4.0	chr3	187685569	187686630	(10608929)	+	MER11A	LTR/ERVK	1	1266	(0)	2770531
12	13.5	0.0	7.9	chr3	188153852	188153889	(10141670)	+	G-rich	Low_complexity	1	38	(0)	2771373
27	22.9	2.6	0.0	chr3	188154039	188154114	(10141445)	+	(GGCGCGG)n	Simple_repeat	1	78	(0)	2771374
29	7.9	0.0	0.0	chr3	188154188	188154228	(10141331)	+	(GCC)n	Simple_repeat	1	41	(0)	2771375
269	29.3	19.7	0.5	chr3	188183658	188183866	(10111693)	C	MIRb	SINE/MIR	(8)	260	2	2771442
10503	13.8	0.5	2.9	chr3	190987551	190989219	(7306340)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	2775926
12	20.5	0.0	9.8	chr3	192409780	192409840	(5885719)	+	G-rich	Low_complexity	1	61	(0)	2777877
14	3.7	10.7	0.0	chr3	192409898	192409925	(5885634)	+	(CGC)n	Simple_repeat	1	31	(0)	2777878
19	19.1	0.0	6.6	chr3	192410232	192410325	(5885234)	+	(CCCT)n	Simple_repeat	1	87	(0)	2777879
4642	8.7	2.8	1.6	chr3	192603471	192604482	(5691077)	C	MER11A	LTR/ERVK	(0)	1266	1	2778164
7428	6.6	14.4	2.0	chr3	193413044	193414149	(4881410)	+	MER11A	LTR/ERVK	1	1266	(0)	2779445
20	6.9	0.0	3.0	chr3	193414150	193414163	(4881396)	+	(AAC)n	Simple_repeat	1	14	(0)	2779446
12	4.8	4.5	0.0	chr3	193744473	193744494	(4551065)	+	(GGCA)n	Simple_repeat	1	23	(0)	2779929
414	27.3	1.6	3.2	chr3	193843112	193843236	(4452323)	+	MIR3	SINE/MIR	22	144	(64)	2780096
18	10.7	3.3	0.0	chr3	194134845	194134874	(4160685)	+	(AC)n	Simple_repeat	1	31	(0)	2780602
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
26	13.3	2.6	7.6	chr3	194141526	194141602	(4153957)	+	(GGC)n	Simple_repeat	1	79	(0)	2780609
645	24.5	1.3	0.0	chr3	194315941	194316095	(3979464)	+	MER5B	DNA/hAT-Charlie	16	172	(6)	2780925
39	10.5	0.0	1.5	chr3	194869284	194869348	(3426211)	+	(GGGAG)n	Simple_repeat	1	65	(0)	2781996
261	33.3	8.8	0.0	chr3	194869349	194869483	(3426076)	C	L2b	LINE/L2	(1208)	2211	2064	2781995
195	27.5	1.4	6.8	chr3	195752029	195752102	(2543457)	C	L2b	LINE/L2	(181)	3194	3125	2783600
13	12.5	0.0	0.0	chr3	196739832	196739857	(1555702)	+	(GCCCC)n	Simple_repeat	1	26	(0)	2785665
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
13	20.0	0.0	2.8	chr3	196968855	196968890	(1326669)	+	G-rich	Low_complexity	1	36	(0)	2786135
2391	25.2	10.4	6.7	chr3	197967090	197967233	(328326)	C	L1MEf	LINE/L1	(2415)	3731	3585	2787907
8213	6.7	12.3	4.8	chr3	197967234	197968186	(327373)	C	MER11A	LTR/ERVK	(0)	1266	217	2787909
343	26.2	15.2	2.0	chr3	198144969	198145116	(150443)	C	MIRb	SINE/MIR	(93)	175	5	2788177
249	26.8	0.0	0.0	chr3	198145272	198145327	(150232)	C	CR1_Mam	LINE/CR1	(1822)	382	327	2788178
282	30.9	2.8	3.5	chr4	473488	473631	(189740924)	+	MER57E3	LTR/ERV1	296	438	(49)	2789143
2530	7.4	0.0	0.3	chr4	497924	498234	(189716321)	+	AluSg	SINE/Alu	1	310	(0)	2789186
2436	12.2	7.3	5.4	chr4	498235	498501	(189716054)	C	MER4A1	LTR/ERV1	(180)	292	3	2789183
1010	9.3	4.4	2.8	chr4	498506	498682	(189715873)	+	L1MA6	LINE/L1	5769	5948	(352)	2789187
34	0.0	0.0	0.0	chr4	576233	576263	(189638292)	+	(CCG)n	Simple_repeat	1	31	(0)	2789272
12	19.9	0.0	0.0	chr4	723448	723476	(189491079)	+	G-rich	Low_complexity	1	29	(0)	2789451
52	10.1	4.0	1.9	chr4	732293	732392	(189482163)	+	(CCCCT)n	Simple_repeat	1	104	(0)	2789464
2445	7.2	0.3	0.3	chr4	757887	758192	(189456363)	+	AluSc	SINE/Alu	1	306	(3)	2789491
442	23.8	12.2	1.1	chr4	764135	764308	(189450247)	+	L1MC1	LINE/L1	6137	6332	(1)	2789494
16	30.6	2.2	3.3	chr4	956214	956302	(189258253)	+	(CCCCTG)n	Simple_repeat	1	91	(0)	2789724
920	17.6	0.0	0.0	chr4	986645	986786	(189227769)	+	AluSz6	SINE/Alu	171	312	(0)	2789759
2084	16.2	4.5	0.0	chr4	1048754	1049116	(189165439)	C	THE1D	LTR/ERVL-MaLR	(1)	380	1	2789804
57	4.2	6.7	2.7	chr4	1172853	1172956	(189041599)	+	(CCCTC)n	Simple_repeat	1	111	(0)	2789956
4258	13.2	2.9	6.0	chr4	1285715	1285834	(188928721)	+	MER4D1	LTR/ERV1	1	108	(792)	2790071
6213	15.7	7.0	2.4	chr4	1285835	1286689	(188927866)	C	LTR28C	LTR/ERV1	(4)	1125	230	2790072
217	34.1	12.5	1.6	chr4	1295383	1295567	(188918988)	+	L2a	LINE/L2	1271	1478	(1941)	2790083
15	28.2	4.6	5.8	chr4	1295634	1295764	(188918791)	+	(ACCCGT)n	Simple_repeat	1	137	(0)	2790084
12	7.8	7.4	0.0	chr4	1408058	1408084	(188806471)	+	G-rich	Low_complexity	1	29	(0)	2790179
26	0.0	2.4	7.0	chr4	1408098	1408139	(188806416)	+	(TCCCC)n	Simple_repeat	1	43	(0)	2790180
12	22.6	5.7	1.8	chr4	1513269	1513321	(188701234)	+	(GCGGCCG)n	Simple_repeat	1	56	(0)	2790271
277	21.0	8.3	0.0	chr4	1574065	1574164	(188640391)	C	L1MC4a	LINE/L1	(1)	7881	7773	2790312
19	18.9	10.1	3.3	chr4	1579168	1579276	(188635279)	+	(GCCCCT)n	Simple_repeat	1	120	(0)	2790314
291	28.9	13.3	1.3	chr4	1579509	1579666	(188634889)	+	MIRb	SINE/MIR	20	199	(69)	2790315
15	13.3	0.0	5.4	chr4	1767113	1767149	(188447406)	+	(GCCC)n	Simple_repeat	1	37	(0)	2790581
31	17.9	2.4	3.6	chr4	1871322	1871403	(188343152)	+	(GCG)n	Simple_repeat	1	84	(0)	2790725
20	10.4	2.2	4.3	chr4	2536140	2536184	(187678371)	+	G-rich	Low_complexity	1	46	(0)	2791756
13	26.1	0.0	0.0	chr4	2536551	2536591	(187677964)	+	G-rich	Low_complexity	1	41	(0)	2791757
12	21.1	0.0	2.9	chr4	2536598	2536632	(187677923)	+	(CCCCT)n	Simple_repeat	1	35	(0)	2791758
1975	10.3	4.9	0.7	chr4	2620567	2620858	(187593697)	+	AluSq2	SINE/Alu	1	305	(8)	2791951
546	27.3	10.1	5.6	chr4	2620859	2621092	(187593463)	C	LTR41C	LTR/ERVL	(83)	618	365	2791950
786	24.9	2.4	7.2	chr4	2621076	2621339	(187593216)	C	LTR41C	LTR/ERVL	(450)	251	1	2791950
19	22.9	0.0	0.0	chr4	2963881	2963926	(187250629)	+	(GCG)n	Simple_repeat	1	46	(0)	2792483
454	35.8	4.2	4.2	chr4	3616691	3616993	(186597562)	C	L1M6	LINE/L1	(3678)	2723	2426	2793387
255	18.9	1.1	6.4	chr4	3617028	3617742	(186596813)	+	(CCTC)n	Simple_repeat	1	677	(0)	2793388
281	27.7	6.2	0.4	chr4	3702426	3702528	(186512027)	+	MIR3	SINE/MIR	43	148	(60)	2793490
529	29.2	1.6	6.4	chr4	4595943	4596209	(185618346)	C	L1ME5	LINE/L1	(7)	6187	5934	2795021
449	33.2	6.4	1.8	chr4	4596282	4596505	(185618050)	C	L1M5	LINE/L1	(392)	5802	5568	2795022
25	24.2	2.9	4.7	chr4	4859276	4859378	(185355177)	+	GA-rich	Low_complexity	1	106	(0)	2795607
13	23.9	0.0	2.4	chr4	4859480	4859520	(185355035)	+	(CCCCT)n	Simple_repeat	1	41	(0)	2795608
267	5.4	0.0	0.0	chr4	6136933	6136969	(184077586)	C	MIRc	SINE/MIR	(121)	147	111	2797809
12	17.0	7.5	0.0	chr4	6199943	6199982	(184014573)	+	G-rich	Low_complexity	1	43	(0)	2797927
21	22.7	4.0	2.6	chr4	6200302	6200376	(184014179)	+	(CGC)n	Simple_repeat	1	78	(0)	2797928
20	3.1	6.1	0.0	chr4	6200656	6200689	(184013866)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	2797929
1905	15.2	1.6	1.0	chr4	6628523	6628832	(183585723)	+	AluJb	SINE/Alu	1	312	(0)	2798770
41	13.9	2.4	1.2	chr4	6628836	6628917	(183585638)	+	G-rich	Low_complexity	1	84	(0)	2798771
230	30.2	5.3	7.0	chr4	6628920	6629147	(183585408)	+	L1ME3B	LINE/L1	5993	6216	(26)	2798765
224	27.7	4.6	1.2	chr4	6710172	6710255	(183504300)	C	MIR	SINE/MIR	(21)	241	155	2798917
12	19.6	0.0	0.0	chr4	6783542	6783570	(183430985)	+	(CTCCC)n	Simple_repeat	1	29	(0)	2799090
24	23.1	4.0	6.2	chr4	6783607	6783731	(183430824)	+	G-rich	Low_complexity	1	130	(0)	2799091
243	25.9	0.0	0.0	chr4	6927195	6927248	(183287307)	C	L2c	LINE/L2	(70)	3317	3264	2799327
258	27.4	8.6	3.6	chr4	6927306	6927415	(183287140)	+	MIR	SINE/MIR	7	122	(140)	2799328
1399	25.5	6.2	2.3	chr4	7442789	7443225	(182771330)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	7	2800154
54	18.1	4.8	2.0	chr4	7512326	7512470	(182702085)	+	GA-rich	Low_complexity	1	152	(0)	2800250
14	31.4	0.0	3.0	chr4	7512648	7512713	(182701842)	+	(CCTCC)n	Simple_repeat	1	66	(0)	2800251
1698	22.0	10.2	0.2	chr4	8221451	8221974	(181992581)	C	L1MC4	LINE/L1	(2)	8040	7472	2801433
203	30.2	0.0	1.6	chr4	8222194	8222257	(181992298)	C	L2b	LINE/L2	(218)	3157	3095	2801432
2082	11.1	0.4	0.4	chr4	8222362	8222671	(181991884)	C	AluSz	SINE/Alu	(0)	312	3	2801434
37	21.8	2.7	2.6	chr4	8892462	8892573	(181321982)	+	(CCTCC)n	Simple_repeat	1	115	(0)	2802429
8809	5.0	0.5	1.6	chr4	9063186	9064268	(181150287)	+	MER11C	LTR/ERVK	1	1071	(0)	2802690
417	31.4	1.9	5.9	chr4	9064269	9064376	(181150179)	C	L2b	LINE/L2	(55)	3371	3265	2802689
4143	9.4	5.3	5.3	chr4	9064381	9065466	(181149089)	C	MER11A	LTR/ERVK	(0)	1266	1	2802691
12	7.0	5.9	5.6	chr4	9152765	9152798	(181061757)	+	(GCCCCT)n	Simple_repeat	1	36	(0)	2802814
22	25.1	1.1	4.5	chr4	9691467	9691553	(180523002)	+	(CCGGCC)n	Simple_repeat	1	88	(0)	2803436
17	21.1	4.7	3.0	chr4	9691684	9691747	(180522808)	+	(GCCCCA)n	Simple_repeat	1	67	(0)	2803437
388	31.6	3.5	2.3	chr4	13529757	13529968	(176684587)	+	MIRb	SINE/MIR	29	247	(21)	2809444
197	24.7	10.5	7.2	chr4	13541465	13541547	(176673008)	+	OldhAT1	DNA/hAT-Ac	1626	1711	(1137)	2809465
36	35.1	1.7	2.8	chr4	14809176	14809353	(175405202)	+	GA-rich	Low_complexity	1	181	(0)	2811578
20	20.4	0.0	0.0	chr4	15002457	15002501	(175212054)	+	(GCG)n	Simple_repeat	1	45	(0)	2811954
22	19.5	0.0	0.0	chr4	15003113	15003159	(175211396)	+	(CCT)n	Simple_repeat	1	47	(0)	2811955
14	8.1	3.9	0.0	chr4	15003176	15003201	(175211354)	+	(AGC)n	Simple_repeat	1	27	(0)	2811956
1939	17.2	3.3	11.4	chr4	15244223	15244647	(174969908)	C	MSTB	LTR/ERVL-MaLR	(31)	395	1	2812326
905	29.3	8.7	2.8	chr4	15245314	15245745	(174968810)	C	LTR16B2	LTR/ERVL	(0)	462	3	2812328
29	7.9	0.0	0.0	chr4	18021687	18021727	(172192828)	+	(GCG)n	Simple_repeat	1	41	(0)	2817243
13	23.9	0.0	2.4	chr4	18021876	18021916	(172192639)	+	(CTCCC)n	Simple_repeat	1	41	(0)	2817244
2926	20.5	2.2	4.6	chr4	18063862	18064475	(172150080)	+	MER77	LTR/ERVL	2	600	(4)	2817318
2057	11.3	2.5	0.0	chr4	19371755	19372029	(170842526)	+	AluSp	SINE/Alu	2	283	(30)	2819388
811	30.7	5.4	0.8	chr4	19372176	19372421	(170842134)	C	MIRb	SINE/MIR	(8)	260	3	2819389
16	23.0	7.0	3.3	chr4	22515667	22515752	(167698803)	+	(GCA)n	Simple_repeat	1	92	(0)	2824078
30	26.4	1.5	5.8	chr4	22516000	22516135	(167698420)	+	(CGC)n	Simple_repeat	1	138	(0)	2824079
13	28.4	0.0	2.0	chr4	24584229	24584277	(165630278)	+	(CCCGG)n	Simple_repeat	1	49	(0)	2827350
1476	13.6	0.0	0.9	chr4	25596592	25596805	(164617750)	+	AluSx	SINE/Alu	1	212	(100)	2829310
3797	10.1	5.9	1.5	chr4	25596833	25597828	(164616727)	C	MER11A	LTR/ERVK	(0)	1266	6	2829311
202	32.4	3.9	0.0	chr4	26320446	26320519	(163894036)	+	L2b	LINE/L2	3298	3374	(1)	2830849
15	14.2	10.6	0.0	chr4	26860767	26860813	(163353742)	+	(GCG)n	Simple_repeat	1	52	(0)	2831734
16	0.0	0.0	0.0	chr4	26860925	26860942	(163353613)	+	(T)n	Simple_repeat	1	18	(0)	2831735
1774	13.8	0.7	5.9	chr4	28788650	28788973	(161425582)	C	MER50	LTR/ERV1	(131)	603	297	2834501
732	15.5	4.5	1.6	chr4	30682349	30682477	(159532078)	+	AluJb	SINE/Alu	1	133	(179)	2837035
4239	9.0	5.6	1.5	chr4	30682517	30683530	(159531025)	C	MER11A	LTR/ERVK	(1)	1265	1	2837036
30	18.8	0.0	0.0	chr4	31676286	31676340	(158538215)	+	A-rich	Low_complexity	1	55	(0)	2838437
22	21.1	2.0	0.0	chr4	31676342	31676390	(158538165)	+	(TG)n	Simple_repeat	1	50	(0)	2838438
252	32.9	1.4	0.0	chr4	31676395	31676464	(158538091)	+	MIR	SINE/MIR	59	129	(133)	2838439
344	32.3	5.2	3.5	chr4	31676506	31676675	(158537880)	C	MIRb	SINE/MIR	(50)	218	46	2838440
13160	17.9	1.9	2.1	chr4	34916593	34917968	(155296587)	+	L1PB4	LINE/L1	6208	7574	(1)	2842747
30	16.3	0.0	3.0	chr4	37977230	37977295	(152237260)	+	(CCCTC)n	Simple_repeat	1	66	(0)	2847045
21	26.8	1.3	2.6	chr4	37977356	37977430	(152237125)	+	(CCG)n	Simple_repeat	1	76	(0)	2847046
1706	22.4	8.9	9.0	chr4	38338079	38338509	(151876046)	+	L1M5	LINE/L1	3683	4088	(2058)	2847617
781	14.2	5.3	12.0	chr4	38338512	38338658	(151875897)	C	AluSz6	SINE/Alu	(22)	290	152	2847619
6794	8.4	16.2	0.7	chr4	38338659	38339726	(151874829)	C	MER11A	LTR/ERVK	(0)	1266	1	2847620
27	21.3	1.9	6.5	chr4	38663746	38663850	(151550705)	+	(GGCGG)n	Simple_repeat	1	107	(0)	2848195
18	14.0	0.0	4.7	chr4	38663850	38663892	(151550663)	+	(GCCGC)n	Simple_repeat	1	43	(0)	2848196
24	11.3	4.8	4.5	chr4	38663970	38664032	(151550523)	+	G-rich	Low_complexity	1	66	(0)	2848197
12	25.3	3.8	1.8	chr4	38664311	38664363	(151550192)	+	(CGCC)n	Simple_repeat	1	55	(0)	2848198
19	0.0	0.0	0.0	chr4	38752955	38752975	(151461580)	+	(T)n	Simple_repeat	1	21	(0)	2848352
19	28.1	2.5	2.4	chr4	39044713	39044793	(151169762)	+	(GGCGG)n	Simple_repeat	1	83	(0)	2848878
15	20.6	5.4	5.1	chr4	39045011	39045084	(151169471)	+	(CCCGC)n	Simple_repeat	1	78	(0)	2848879
19	0.0	0.0	6.5	chr4	39977560	39977590	(150236965)	+	(CCG)n	Simple_repeat	1	31	(0)	2850913
20	25.4	1.6	1.6	chr4	41216400	41216413	(148998142)	+	(GCG)n	Simple_repeat	1	31	(33)	2853654
25	11.8	0.0	0.0	chr4	41216414	41216450	(148998105)	+	(G)n	Simple_repeat	1	37	(0)	2853655
20	25.4	1.6	1.6	chr4	41216451	41216462	(148998093)	+	(GCG)n	Simple_repeat	32	64	(0)	2853654
5467	12.6	4.9	9.1	chr4	41932751	41933716	(148280839)	C	MER49	LTR/ERV1	(0)	923	1	2854838
5746	6.4	0.0	0.6	chr4	42285438	42286149	(147928406)	C	LTR17	LTR/ERV1	(72)	708	1	2855413
12	19.1	5.9	3.7	chr4	42656945	42656995	(147557560)	+	(CCGCG)n	Simple_repeat	1	54	(0)	2855920
7365	7.4	12.9	2.7	chr4	44191008	44192141	(146022414)	+	MER11A	LTR/ERVK	1	1266	(0)	2857942
13	8.5	4.0	0.0	chr4	44448672	44448696	(145765859)	+	(CGG)n	Simple_repeat	1	26	(0)	2858301
4898	11.1	24.9	4.2	chr4	47989842	47990832	(142223723)	+	MER11A	LTR/ERVK	1	1264	(2)	2863116
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
15	17.2	7.4	1.7	chr4	51843409	51843462	(138371093)	+	G-rich	Low_complexity	1	58	(0)	2865384
15	8.5	0.0	0.0	chr4	51843656	51843680	(138370875)	+	(GAGC)n	Simple_repeat	1	25	(0)	2865385
276	23.9	4.3	2.2	chr4	52070707	52070796	(138143759)	+	L1M5	LINE/L1	2677	2768	(3378)	2865681
18	4.8	0.0	0.0	chr4	52070898	52070919	(138143636)	+	(AC)n	Simple_repeat	1	22	(0)	2865682
482	28.7	6.1	6.1	chr4	52070924	52071416	(138143139)	C	L1M6	LINE/L1	(5085)	1411	919	2865683
11	24.1	0.0	0.0	chr4	52658759	52658792	(137555763)	+	(CCCCCA)n	Simple_repeat	1	34	(0)	2866514
13	15.1	6.2	3.9	chr4	52659371	52659418	(137555137)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	2866515
47	0.0	0.0	0.0	chr4	52855520	52855559	(137358996)	+	(GT)n	Simple_repeat	1	40	(0)	2866884
4903	9.1	2.7	2.1	chr4	54466654	54467666	(135746889)	+	MER11A	LTR/ERVK	1	1266	(0)	2869345
14	16.2	4.7	2.2	chr4	55546253	55546295	(134668260)	+	(CCGCC)n	Simple_repeat	1	45	(0)	2871090
19	25.8	2.6	2.5	chr4	55546401	55546477	(134668078)	+	(CCCGCCC)n	Simple_repeat	1	79	(0)	2871091
13	13.1	0.0	0.0	chr4	55546669	55546694	(134667861)	+	(CCTTC)n	Simple_repeat	1	26	(0)	2871092
12	15.3	8.1	0.0	chr4	55546695	55546700	(134667855)	+	(CTCCCC)n	Simple_repeat	6	40	(0)	2871093
220	32.4	7.1	5.9	chr4	55948393	55948628	(134265927)	C	L2c	LINE/L2	(64)	3323	3085	2871739
1806	18.2	7.2	3.4	chr4	56217870	56218238	(133996317)	C	MLT1C	LTR/ERVL-MaLR	(67)	400	7	2872250
833	14.9	0.8	3.0	chr4	56218277	56218410	(133996145)	C	FLAM_C	SINE/Alu	(12)	131	1	2872252
90	19.5	1.5	1.0	chr4	56218413	56218608	(133995947)	+	(CTTCC)n	Simple_repeat	1	199	(0)	2872253
891	21.0	0.6	0.0	chr4	56218610	56218771	(133995784)	C	AluJr4	SINE/Alu	(13)	299	137	2872254
13	23.8	5.4	3.9	chr4	56907974	56908047	(133306508)	+	(CCGAGGC)n	Simple_repeat	1	78	(0)	2873604
15	13.7	0.0	5.6	chr4	56908351	56908386	(133306169)	+	(CGG)n	Simple_repeat	1	36	(0)	2873605
12	21.8	2.7	0.0	chr4	56908912	56908948	(133305607)	+	(CCGGCGC)n	Simple_repeat	1	38	(0)	2873606
13	21.3	2.2	2.2	chr4	57109922	57109966	(133104589)	+	(CGCGGCT)n	Simple_repeat	1	46	(0)	2873982
17	19.4	2.4	0.0	chr4	57110266	57110306	(133104249)	+	GA-rich	Low_complexity	1	42	(0)	2873983
4060	12.0	5.4	3.5	chr4	58185199	58186217	(132028338)	C	MER11A	LTR/ERVK	(0)	1266	1	2875479
7013	19.9	11.6	6.2	chr4	59517004	59518952	(130695603)	C	MER52A	LTR/ERV1	(0)	2123	55	2877070
49	25.2	3.5	0.0	chr4	61199939	61200082	(129014473)	+	GA-rich	Low_complexity	1	149	(0)	2879115
23	28.9	0.0	4.3	chr4	61200502	61200593	(129013962)	+	(CGC)n	Simple_repeat	1	92	(0)	2879116
4133	15.4	5.8	1.3	chr4	64016989	64017738	(126196817)	C	LTR1A1	LTR/ERV1	(13)	786	1	2882672
4665	12.3	1.8	0.4	chr4	64146358	64147036	(126067519)	C	HERVK11-int	LTR/ERVK	(7265)	688	1	2882816
4622	9.7	2.1	3.6	chr4	64147037	64148096	(126066459)	C	MER11A	LTR/ERVK	(0)	1266	1	2882816
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
4092	9.2	3.0	8.5	chr4	66012389	66013483	(124201072)	+	MER11A	LTR/ERVK	1	1266	(0)	2885111
7570	15.2	1.5	0.5	chr4	66013484	66014945	(124199610)	C	L1PA8A	LINE/L1	(5000)	1483	2	2885110
67	19.4	0.6	5.5	chr4	66300616	66300797	(123913758)	+	(CTTCC)n	Simple_repeat	1	183	(0)	2885461
777	20.1	0.7	0.0	chr4	67216138	67216271	(122998284)	+	FLAM_C	SINE/Alu	1	135	(8)	2886616
41	39.2	0.9	2.8	chr4	67216296	67216509	(122998046)	+	A-rich	Low_complexity	1	216	(0)	2886617
1094	17.2	0.0	0.0	chr4	67216510	67216678	(122997877)	+	AluJb	SINE/Alu	130	298	(14)	2886618
6077	10.7	16.0	2.7	chr4	68702766	68703857	(121510698)	+	MER11A	LTR/ERVK	1	1266	(0)	2888619
5720	21.3	3.1	3.1	chr4	68703858	68704041	(121510514)	C	L1MB1	LINE/L1	(2168)	3972	3798	2888618
1735	20.1	0.8	0.5	chr4	69295586	69295944	(120918611)	C	L1PB1	LINE/L1	(0)	6151	5792	2889249
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
12	20.4	5.6	3.5	chr4	70902418	70902471	(119312084)	+	(CTCCTGT)n	Simple_repeat	1	57	(0)	2891447
13	9.3	5.3	5.0	chr4	71186674	71186711	(119027844)	+	G-rich	Low_complexity	1	40	(0)	2891895
251	23.4	1.3	8.3	chr4	71729081	71729164	(118485391)	C	MamRep38	DNA/hAT	(217)	78	1	2892592
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
13	19.2	6.1	1.9	chr4	72569320	72569368	(117645187)	+	(GCTGCTG)n	Simple_repeat	1	52	(0)	2893670
5140	22.6	5.5	3.1	chr4	76296205	76297655	(113916900)	+	MLT1F1-int	LTR/ERVL-MaLR	1	1488	(1)	2899028
1027	21.2	1.9	0.0	chr4	76297664	76297866	(113916689)	+	MLT1F1	LTR/ERVL-MaLR	8	214	(355)	2899028
15	21.5	2.3	0.0	chr4	76421655	76421700	(113792855)	+	(CCCCA)n	Simple_repeat	1	47	(0)	2899209
240	23.7	4.9	0.0	chr4	76771675	76771769	(113442786)	C	MIRb	SINE/MIR	(12)	256	159	2899815
24	17.9	3.5	0.0	chr4	77075446	77075502	(113139053)	+	(CCT)n	Simple_repeat	1	59	(0)	2900311
20	16.3	0.0	5.6	chr4	77075643	77075696	(113138859)	+	G-rich	Low_complexity	1	54	(0)	2900312
18	12.6	0.0	0.0	chr4	77075885	77075911	(113138644)	+	(A)n	Simple_repeat	1	27	(0)	2900313
21	17.5	3.6	1.8	chr4	77075912	77075937	(113138618)	+	A-rich	Low_complexity	3	57	(0)	2900314
320	9.1	0.0	0.0	chr4	77319929	77319972	(112894583)	C	THE1B-int	LTR/ERVL-MaLR	(381)	1199	1156	2900641
4346	10.4	3.3	2.0	chr4	77319975	77320979	(112893576)	C	MER11A	LTR/ERVK	(0)	1266	1	2900642
7436	5.8	13.6	4.5	chr4	77945570	77946714	(112267841)	C	MER11A	LTR/ERVK	(0)	1266	1	2901459
206	33.3	5.3	3.6	chr4	78217392	78217559	(111996996)	C	L2	LINE/L2	(624)	2795	2625	2901850
152	15.5	0.0	3.1	chr4	78217786	78218077	(111996478)	+	(CTCCC)n	Simple_repeat	1	292	(0)	2901851
42	0.0	0.0	0.0	chr4	78218099	78218134	(111996421)	+	(CA)n	Simple_repeat	1	36	(0)	2901852
4430	25.2	6.1	4.2	chr4	78396600	78398110	(111816445)	C	L1MA9	LINE/L1	(4589)	2907	1366	2902087
15	5.5	0.0	0.0	chr4	78776041	78776059	(111438496)	+	(C)n	Simple_repeat	1	19	(0)	2902732
12	19.1	3.8	5.5	chr4	78776078	78776130	(111438425)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	2902733
19	10.9	0.0	6.7	chr4	78776289	78776333	(111438222)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2902734
15	7.6	8.9	4.1	chr4	78776337	78776381	(111438174)	+	G-rich	Low_complexity	1	49	(0)	2902735
27	19.1	2.7	2.6	chr4	78776577	78776651	(111437904)	+	(GGCGGC)n	Simple_repeat	1	77	(0)	2902736
16	16.6	0.0	0.0	chr4	78939644	78939670	(111274885)	+	(T)n	Simple_repeat	1	27	(0)	2902973
4734	9.5	2.1	1.6	chr4	79116708	79117725	(111096830)	+	MER11A	LTR/ERVK	1	1266	(0)	2903203
12	13.9	0.0	0.0	chr4	80072759	80072782	(110141773)	+	(CCG)n	Simple_repeat	1	24	(0)	2904351
28	14.7	6.6	3.7	chr4	80184410	80184485	(110030070)	+	(CT)n	Simple_repeat	1	81	(0)	2904505
25	32.3	2.2	0.0	chr4	80197531	80197620	(110016935)	+	(CT)n	Simple_repeat	1	92	(0)	2904518
27	2.8	2.6	2.5	chr4	81030439	81030477	(109184078)	+	(AAAAC)n	Simple_repeat	1	40	(0)	2905572
12	17.3	8.9	3.3	chr4	81030514	81030569	(109183986)	+	(TCCTCT)n	Simple_repeat	1	61	(0)	2905573
2241	12.4	0.0	0.7	chr4	81320834	81321132	(108893423)	C	AluSz	SINE/Alu	(15)	297	1	2905965
2160	22.0	2.2	1.6	chr4	81321174	81321813	(108892742)	+	L1PA10	LINE/L1	1	642	(5819)	2905966
469	31.6	2.6	3.2	chr4	81480356	81480576	(108733979)	+	MIR	SINE/MIR	4	223	(39)	2906163
1135	18.8	7.1	6.1	chr4	81480571	81480864	(108733691)	+	L2a	LINE/L2	3130	3426	(0)	2906164
35	29.7	1.1	5.5	chr4	82373481	82373661	(107840894)	+	(CGC)n	Simple_repeat	1	183	(0)	2907493
27	0.0	0.0	0.0	chr4	82561547	82561572	(107652983)	+	(CGGGGC)n	Simple_repeat	1	26	(0)	2907832
15	21.1	0.0	0.0	chr4	82561953	82561986	(107652569)	+	(GCG)n	Simple_repeat	1	34	(0)	2907833
13	12.2	2.4	7.1	chr4	82562025	82562065	(107652490)	+	(CCCG)n	Simple_repeat	1	42	(0)	2907834
16	16.8	0.0	0.0	chr4	82798073	82798099	(107416456)	+	G-rich	Low_complexity	1	27	(0)	2908255
12	15.3	2.4	7.0	chr4	82798411	82798452	(107416103)	+	(GCCGC)n	Simple_repeat	1	43	(0)	2908256
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
19	19.5	3.2	3.1	chr4	83334720	83334781	(106879774)	+	(CAGCAG)n	Simple_repeat	1	64	(0)	2909319
17	20.9	2.9	5.7	chr4	83334900	83334967	(106879588)	+	(CCTC)n	Simple_repeat	1	70	(0)	2909320
13	9.4	5.3	5.0	chr4	83485208	83485245	(106729310)	+	G-rich	Low_complexity	1	40	(0)	2909614
11994	11.5	1.5	1.2	chr4	84202329	84206059	(106008496)	+	L1PA7	LINE/L1	4	3734	(2727)	2910817
3591	14.0	6.2	2.4	chr4	84206060	84207025	(106007530)	C	MER11A	LTR/ERVK	(11)	1255	1	2910818
12	20.8	8.0	0.0	chr4	84582715	84582764	(105631791)	+	(GCCTCC)n	Simple_repeat	1	54	(0)	2911313
13	12.2	7.9	2.4	chr4	84583041	84583078	(105631477)	+	(TCC)n	Simple_repeat	1	41	(0)	2911314
14	16.4	2.9	0.0	chr4	84965922	84965955	(105248600)	+	(CCGACC)n	Simple_repeat	1	35	(0)	2911909
18	26.4	0.0	7.9	chr4	84966648	84966680	(105247875)	+	(TCC)n	Simple_repeat	1	43	(46)	2911910
13	9.3	0.0	0.0	chr4	84966681	84966703	(105247852)	+	(CTGA)n	Simple_repeat	1	23	(0)	2911911
18	26.4	0.0	7.9	chr4	84966704	84966736	(105247819)	+	(TCC)n	Simple_repeat	44	89	(0)	2911910
19	13.0	2.2	4.3	chr4	84966775	84966782	(105247773)	+	(CCTT)n	Simple_repeat	1	46	(0)	2911912
13	12.6	5.4	2.6	chr4	84966783	84966819	(105247736)	+	(CCTTT)n	Simple_repeat	1	39	(0)	2911913
13	29.0	1.5	4.3	chr4	84966951	84967018	(105247537)	+	(CTCCT)n	Simple_repeat	1	69	(0)	2911914
2577	14.2	3.0	0.0	chr4	85134990	85135404	(105079151)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2912148
1271	21.6	4.2	4.8	chr4	85135407	85135890	(105078665)	C	MSTD	LTR/ERVL-MaLR	(1)	464	1	2912149
17	8.9	0.0	0.0	chr4	85475770	85475793	(104738762)	+	(TG)n	Simple_repeat	1	24	(0)	2912566
37	21.7	5.7	0.0	chr4	85476001	85476106	(104738449)	+	(AT)n	Simple_repeat	1	112	(0)	2912567
5649	6.2	3.1	3.5	chr4	85956406	85957188	(104257367)	C	LTR17	LTR/ERV1	(0)	780	1	2913222
15	35.5	2.4	2.3	chr4	86632628	86632711	(103581844)	+	(CTT)n	Simple_repeat	1	86	(0)	2914141
442	11.9	10.0	13.1	chr4	86632753	86632811	(103581744)	C	L1MB7	LINE/L1	(0)	6184	6138	2914142
1801	17.0	1.4	0.3	chr4	86632812	86633105	(103581450)	C	AluJr4	SINE/Alu	(15)	297	1	2914143
13	12.2	3.7	0.0	chr4	86935280	86935306	(103279249)	+	(CCG)n	Simple_repeat	1	28	(0)	2914647
4181	8.7	2.8	1.7	chr4	87293570	87294581	(102919974)	C	MER11A	LTR/ERVK	(0)	1266	1	2915260
1796	19.0	0.0	0.7	chr4	87391536	87391830	(102822725)	+	AluJo	SINE/Alu	2	294	(18)	2915433
3016	16.3	1.5	0.0	chr4	87679947	87680480	(102534075)	+	MER34	LTR/ERV1	1	542	(0)	2915914
11001	9.8	0.6	6.1	chr4	87724723	87726386	(102488169)	+	THE1B-int	LTR/ERVL-MaLR	1	1572	(8)	2915972
2144	15.4	3.0	0.0	chr4	87726395	87726745	(102487810)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	2915972
472	33.3	12.3	3.9	chr4	88285089	88285819	(101928736)	C	L2a	LINE/L2	(0)	3426	2612	2916879
657	31.4	10.1	6.2	chr4	88363638	88363977	(101850578)	+	MLT1J	LTR/ERVL-MaLR	47	404	(108)	2917035
4617	8.6	2.6	3.7	chr4	88363978	88365027	(101849528)	C	MER11A	LTR/ERVK	(0)	1266	1	2917037
23	31.3	5.2	0.7	chr4	88379171	88379305	(101835250)	+	G-rich	Low_complexity	1	142	(0)	2917064
16	23.3	2.2	0.0	chr4	89307845	89307889	(100906666)	+	(GCC)n	Simple_repeat	1	46	(0)	2918454
19	14.8	0.0	2.5	chr4	89308014	89308053	(100906502)	+	(GGC)n	Simple_repeat	1	40	(0)	2918455
5980	7.2	0.0	1.6	chr4	91008736	91009528	(99205027)	C	LTR17	LTR/ERV1	(0)	780	1	2920691
654	31.2	4.3	5.3	chr4	91775317	91776068	(98438487)	C	MER83B-int	LTR/ERV1	(4411)	2128	1067	2921519
3347	23.6	5.3	2.5	chr4	91776235	91777214	(98437341)	C	MER83B-int	LTR/ERV1	(5231)	1860	209	2921519
231	24.3	2.8	0.0	chr4	92121341	92121410	(98093145)	C	UCON31	Unknown	(298)	156	85	2921897
2352	7.1	0.0	0.3	chr4	94340312	94340638	(95873917)	C	AluY	SINE/Alu	(0)	311	1	2924843
1221	9.7	0.0	0.0	chr4	94340651	94340830	(95873725)	C	AluSq2	SINE/Alu	(0)	313	129	2924844
2424	6.3	3.2	0.3	chr4	94340834	94341135	(95873420)	C	AluSx1	SINE/Alu	(1)	311	1	2924845
507	24.5	0.0	0.0	chr4	95810472	95810586	(94403969)	C	FLAM_C	SINE/Alu	(168)	134	20	2926858
443	27.8	2.0	6.7	chr4	95810637	95810844	(94403711)	+	LTR78	LTR/ERV1	195	392	(912)	2926859
252	34.9	7.2	3.7	chr4	95810861	95810994	(94403561)	+	LTR78	LTR/ERV1	365	503	(801)	2926859
1078	12.8	14.0	1.0	chr4	95811010	95811207	(94403348)	+	MER4E1	LTR/ERV1	1	228	(382)	2926860
8617	14.9	7.0	1.2	chr4	97446885	97448369	(92766186)	+	THE1D-int	LTR/ERVL-MaLR	3	1580	(0)	2928918
64	17.4	0.8	0.8	chr4	98931317	98931443	(91283112)	+	(TCCCC)n	Simple_repeat	1	128	(0)	2930949
43	0.0	0.0	0.0	chr4	98931455	98931493	(91283062)	+	(CTTC)n	Simple_repeat	1	39	(0)	2930950
1895	16.0	1.4	1.0	chr4	98931496	98931788	(91282767)	C	AluJo	SINE/Alu	(18)	294	1	2930951
29	19.8	1.9	4.4	chr4	98995507	98995586	(91218969)	+	G-rich	Low_complexity	1	78	(0)	2931108
13	27.6	5.6	1.3	chr4	98995966	98996036	(91218519)	+	(CTC)n	Simple_repeat	1	75	(0)	2931109
377	19.6	18.2	6.3	chr4	99088016	99088173	(91126382)	+	MIRb	SINE/MIR	49	229	(39)	2931241
206	30.4	1.2	7.1	chr4	99088270	99088354	(91126201)	+	MIR3	SINE/MIR	33	112	(96)	2931242
364	20.5	1.2	0.0	chr4	100592745	100592827	(89621728)	C	MER53	DNA/hAT	(108)	85	2	2933261
790	36.0	13.8	3.7	chr4	100592858	100593534	(89621021)	+	MamGypLTR1a	LTR/Gypsy	30	778	(6)	2933262
15	17.5	4.6	5.9	chr4	101346054	101346118	(88868437)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	2934244
21	9.4	0.0	0.0	chr4	101346184	101346217	(88868338)	+	(AGGGGG)n	Simple_repeat	1	34	(0)	2934245
13	27.8	3.1	3.0	chr4	101346414	101346477	(88868078)	+	(CAC)n	Simple_repeat	1	66	(0)	2934246
15	15.9	2.9	0.0	chr4	101346648	101346682	(88867873)	+	(GGCGA)n	Simple_repeat	1	36	(0)	2934247
3826	12.3	7.0	3.2	chr4	102718684	102719555	(87495000)	C	MER11A	LTR/ERVK	(0)	1266	219	2936045
13	20.7	2.1	4.1	chr4	102827165	102827212	(87387343)	+	(CGCGCC)n	Simple_repeat	1	49	(0)	2936199
13	14.7	0.0	3.1	chr4	103019725	103019756	(87194799)	+	G-rich	Low_complexity	1	32	(0)	2936488
205	28.6	2.5	0.0	chr4	103198061	103198137	(87016418)	C	MIR3	SINE/MIR	(16)	192	114	2936744
4254	6.7	0.6	11.6	chr4	103849131	103849652	(86364903)	+	MER11A	LTR/ERVK	813	1262	(4)	2937519
10130	9.1	1.2	0.2	chr4	103849658	103851875	(86362680)	+	L1PA8	LINE/L1	3958	6172	(0)	2937518
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
12	18.1	0.0	3.0	chr4	106793981	106794013	(83420542)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2941239
3161	23.4	10.2	3.4	chr4	107045631	107046942	(83167613)	+	L1M8	LINE/L1	232	1726	(629)	2941572
31	28.5	0.0	2.0	chr4	107150494	107150600	(83063955)	+	G-rich	Low_complexity	1	104	(0)	2941720
4244	9.8	3.3	1.9	chr4	109021307	109022310	(81192245)	+	MER11A	LTR/ERVK	1	1266	(0)	2944374
11876	11.8	3.0	3.0	chr4	109022311	109024294	(81190261)	+	Tigger5	DNA/TcMar-Tigger	423	2406	(0)	2944375
30	19.4	0.0	2.9	chr4	110031023	110031090	(80183465)	+	(GT)n	Simple_repeat	1	68	(0)	2945870
12	8.8	4.2	0.0	chr4	110031159	110031182	(80183373)	+	(TTTA)n	Simple_repeat	1	25	(0)	2945871
591	35.3	14.0	2.0	chr4	110031192	110031593	(80182962)	C	L2b	LINE/L2	(0)	3375	2918	2945872
15	22.1	0.0	2.3	chr4	110623140	110623183	(79591372)	+	(CTCCGC)n	Simple_repeat	1	44	(0)	2946875
3614	13.2	7.0	2.2	chr4	112072880	112073842	(78140713)	+	MER11A	LTR/ERVK	1	1266	(0)	2948654
11742	10.3	0.5	0.5	chr4	112836396	112838026	(77376529)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	2949976
6743	17.5	15.9	2.0	chr4	112979013	112980517	(77234038)	C	MER52A	LTR/ERV1	(0)	1755	1	2950218
2151	12.5	1.7	0.0	chr4	113431297	113431591	(76782964)	+	AluSz	SINE/Alu	2	301	(11)	2950796
947	31.2	12.0	3.8	chr4	113431592	113432034	(76782521)	C	L2	LINE/L2	(1715)	1704	1226	2950795
1271	22.2	7.2	3.2	chr4	113555767	113556114	(76658441)	+	MLT1A	LTR/ERVL-MaLR	10	372	(2)	2950945
1771	23.5	5.2	10.4	chr4	115289705	115290180	(74924375)	+	MLT2B1	LTR/ERVL	74	520	(0)	2953079
770	33.2	10.7	4.0	chr4	115290181	115290716	(74923839)	C	L2a	LINE/L2	(338)	3088	2523	2953078
6059	8.0	0.0	1.3	chr4	117113515	117114304	(73100251)	C	LTR17	LTR/ERV1	(0)	780	1	2955304
17	21.4	10.2	1.0	chr4	118033558	118033645	(72180910)	+	G-rich	Low_complexity	1	97	(0)	2956363
2549	10.7	2.5	0.0	chr4	119711117	119711470	(70503085)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	2958876
10454	10.8	4.2	2.0	chr4	119711472	119712566	(70501989)	+	THE1B-int	LTR/ERVL-MaLR	1	1142	(438)	2958876
2389	30.3	4.5	4.7	chr4	119851634	119852045	(70362510)	C	L1MEa	LINE/L1	(5655)	439	30	2959079
435	19.6	2.9	1.0	chr4	119852107	119852209	(70362346)	+	MLT1A0	LTR/ERVL-MaLR	1	105	(260)	2959081
3573	13.1	2.6	1.3	chr4	119852233	119853045	(70361510)	+	L1P4	LINE/L1	4711	5536	(630)	2959082
426	31.7	4.0	3.5	chr4	120930922	120931094	(69283461)	C	MIRb	SINE/MIR	(94)	174	1	2960409
228	36.5	4.5	0.0	chr4	120931225	120931350	(69283205)	C	MLT1M	LTR/ERVL-MaLR	(418)	254	123	2960410
40	9.3	0.0	0.0	chr4	121072697	121072753	(69141802)	+	(CA)n	Simple_repeat	1	57	(0)	2960589
40	11.7	0.0	0.0	chr4	121237895	121237959	(68976596)	+	(TCTCCC)n	Simple_repeat	1	65	(0)	2960801
9702	7.1	2.2	3.4	chr4	121237960	121239357	(68975198)	+	SVA_B	Retroposon/SVA	1	1382	(1)	2960802
2101	19.2	4.8	2.8	chr4	122083265	122083757	(68130798)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	2962048
2246	22.8	16.0	3.6	chr4	122084065	122084851	(68129704)	+	MER21C	LTR/ERVL	10	913	(25)	2962049
2509	6.8	4.2	0.0	chr4	123414138	123414433	(66800122)	+	AluY	SINE/Alu	1	309	(2)	2963931
19	0.0	0.0	0.0	chr4	123447149	123447169	(66767386)	+	(T)n	Simple_repeat	1	21	(0)	2963986
36	10.7	0.0	3.1	chr4	123447343	123447407	(66767148)	+	(CCCCT)n	Simple_repeat	1	65	(0)	2963987
1547	13.3	0.0	13.3	chr4	123447408	123447723	(66766832)	C	AluJo	SINE/Alu	(10)	302	29	2963988
18	13.6	3.7	5.4	chr4	124712247	124712300	(65502255)	+	(CTCCCG)n	Simple_repeat	1	56	(0)	2965643
23	24.2	1.6	0.0	chr4	124712431	124712493	(65502062)	+	(CCG)n	Simple_repeat	1	64	(0)	2965644
29	0.0	0.0	0.0	chr4	124712784	124712810	(65501745)	+	(CCCCGC)n	Simple_repeat	1	27	(0)	2965645
5301	15.2	1.2	0.0	chr4	125220672	125221478	(64993077)	+	THE1D-int	LTR/ERVL-MaLR	505	1321	(310)	2966334
2992	16.4	7.8	9.2	chr4	125522606	125523355	(64691200)	+	LTR1F2	LTR/ERV1	1	739	(0)	2966706
2636	28.4	7.7	5.9	chr4	125523356	125524545	(64690010)	C	L1M5	LINE/L1	(2362)	3784	2610	2966703
3848	24.2	3.0	7.8	chr4	127843396	127845016	(62369539)	+	L1PA17	LINE/L1	102	1326	(5593)	2969632
4469	15.6	17.5	1.3	chr4	127996245	127997277	(62217278)	C	MER11B	LTR/ERVK	(0)	1236	1	2969910
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
24	26.3	0.0	1.4	chr4	128062002	128062071	(62152484)	+	(GCC)n	Simple_repeat	1	70	(0)	2970078
18	23.8	2.6	5.1	chr4	128287653	128287728	(61926827)	+	(CGC)n	Simple_repeat	1	78	(0)	2970493
12	22.8	1.5	7.6	chr4	128287796	128287809	(61926746)	+	(CCCGCC)n	Simple_repeat	1	24	(42)	2970494
12	8.4	0.0	6.9	chr4	128287810	128287838	(61926717)	+	(CCTCC)n	Simple_repeat	1	29	(0)	2970495
12	22.8	1.5	7.6	chr4	128287839	128287860	(61926695)	+	(CCCGCC)n	Simple_repeat	25	66	(0)	2970494
13	21.9	3.5	5.0	chr4	128393637	128393694	(61820861)	+	GA-rich	Low_complexity	1	60	(0)	2970684
234	30.4	5.6	4.7	chr4	128393811	128393917	(61820638)	+	L2c	LINE/L2	3041	3148	(239)	2970685
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	18.8	0.0	8.0	chr4	128812373	128812422	(61402133)	+	(CGGCGCG)n	Simple_repeat	1	50	(0)	2971410
2568	14.8	10.5	2.1	chr4	130796116	130796631	(59417924)	+	LTR6A	LTR/ERV1	1	564	(0)	2973855
2345	9.0	0.3	0.0	chr4	130956992	130957281	(59257274)	+	AluSg4	SINE/Alu	1	291	(19)	2974039
3497	11.7	8.0	2.2	chr4	130957296	130958354	(59256201)	C	MER11A	LTR/ERVK	(0)	1236	1	2974040
9118	14.6	6.9	1.4	chr4	132683246	132684783	(57529772)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2976119
6132	7.0	18.3	11.2	chr4	135018363	135019011	(55195544)	C	MER11A	LTR/ERVK	(0)	1266	620	2978774
5623	6.4	4.1	1.3	chr4	136200993	136201750	(54012805)	+	LTR17	LTR/ERV1	1	780	(0)	2980199
21	34.2	2.6	1.7	chr4	137680467	137680581	(52533974)	+	GA-rich	Low_complexity	1	118	(0)	2981967
4859	14.4	14.9	4.5	chr4	137830478	137831579	(52382976)	C	MER11B	LTR/ERVK	(0)	1236	1	2982146
2381	19.3	9.3	0.4	chr4	138816961	138817459	(51397096)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2983396
13	17.8	5.3	0.0	chr4	139177126	139177163	(51037392)	+	(CCGCC)n	Simple_repeat	1	40	(0)	2984094
15	17.7	3.5	6.7	chr4	139177227	139177304	(51037251)	+	(CCT)n	Simple_repeat	1	75	(0)	2984095
16	5.2	0.0	0.0	chr4	139555180	139555199	(50659356)	+	(A)n	Simple_repeat	1	20	(0)	2984843
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
1838	14.5	0.7	3.1	chr4	139832095	139832411	(50382144)	C	AluSz6	SINE/Alu	(0)	312	1	2985315
14	24.4	3.6	1.8	chr4	140150977	140151031	(50063524)	+	G-rich	Low_complexity	1	57	(0)	2985796
32	19.4	2.5	1.2	chr4	140151163	140151241	(50063314)	+	GA-rich	Low_complexity	1	81	(0)	2985797
976	24.7	16.4	1.0	chr4	140494950	140495443	(49719112)	+	L2a	LINE/L2	2764	3352	(74)	2986320
376	25.0	2.5	11.4	chr4	140495504	140495634	(49718921)	C	L2a	LINE/L2	(0)	3426	3308	2986322
1038	33.4	11.1	5.7	chr4	140975959	140977067	(49237488)	+	L2	LINE/L2	357	1533	(1886)	2987091
236	31.2	0.0	2.4	chr4	140977087	140977168	(49237387)	+	MIRb	SINE/MIR	187	266	(2)	2987092
18	24.4	4.3	1.4	chr4	141132825	141132893	(49081662)	+	(CCCCG)n	Simple_repeat	1	72	(0)	2987300
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
46	14.8	0.0	1.2	chr4	143082183	143082267	(47132288)	+	GA-rich	Low_complexity	1	85	(0)	2989769
268	29.1	6.9	10.9	chr4	143082288	143082470	(47132085)	C	LTR84b	LTR/ERVL	(422)	335	153	2989770
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
12	13.5	2.8	5.4	chr4	143336362	143336397	(46878158)	+	G-rich	Low_complexity	1	37	(0)	2990176
14	9.1	0.0	0.0	chr4	143336711	143336734	(46877821)	+	(GGGC)n	Simple_repeat	1	24	(0)	2990177
37	0.0	0.0	0.0	chr4	143336749	143336780	(46877775)	+	(TG)n	Simple_repeat	1	32	(0)	2990178
16	7.2	3.2	3.1	chr4	144646231	144646261	(45568294)	+	(GCC)n	Simple_repeat	1	32	(0)	2991879
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
17	28.2	5.5	1.0	chr4	145936942	145937032	(44277523)	+	(CCCTCTC)n	Simple_repeat	1	96	(0)	2993605
262	30.2	6.2	0.0	chr4	145981904	145982009	(44232546)	C	MLT1O	LTR/ERVL-MaLR	(345)	197	85	2993668
292	25.3	2.1	4.0	chr4	146672733	146672831	(43541724)	+	MER103C	DNA/hAT-Charlie	136	232	(65)	2994640
185	24.3	6.3	13.9	chr4	146672887	146672972	(43541583)	C	L2a	LINE/L2	(42)	3384	3306	2994641
13	4.3	0.0	7.1	chr4	147732031	147732058	(42482497)	+	(GGGGC)n	Simple_repeat	1	28	(0)	2996130
862	21.6	0.0	3.1	chr4	148370869	148371030	(41843525)	C	FAM	SINE/Alu	(28)	157	1	2997034
17	21.0	2.0	1.9	chr4	148444881	148444931	(41769624)	+	(CCCGCGC)n	Simple_repeat	1	52	(0)	2997128
12	26.6	4.5	2.9	chr4	148445298	148445363	(41769192)	+	(CCTCG)n	Simple_repeat	1	69	(0)	2997129
19	25.8	4.5	1.4	chr4	148445549	148445615	(41768940)	+	(CG)n	Simple_repeat	1	70	(0)	2997130
21	23.5	1.5	2.9	chr4	150078208	150078275	(40136280)	+	(CTC)n	Simple_repeat	1	69	(0)	2999259
11	21.7	0.0	4.9	chr4	150078726	150078766	(40135789)	+	G-rich	Low_complexity	1	41	(0)	2999260
1497	17.2	6.0	0.4	chr4	150327157	150327406	(39887149)	+	AluJr	SINE/Alu	5	269	(43)	2999590
818	26.0	5.4	2.2	chr4	150327554	150327785	(39886770)	+	MIRb	SINE/MIR	29	268	(0)	2999591
13	10.3	2.9	5.6	chr4	151325528	151325562	(38888993)	+	(GCCGG)n	Simple_repeat	1	36	(0)	3001283
13	19.2	2.8	0.0	chr4	151325612	151325647	(38888908)	+	(TCCCAC)n	Simple_repeat	1	37	(0)	3001284
2779	4.0	0.0	0.0	chr4	152842007	152842330	(37372225)	+	LTR17	LTR/ERV1	1	324	(456)	3003659
11170	10.8	1.4	0.4	chr4	152842345	152844378	(37370177)	C	L1PB1	LINE/L1	(4487)	2376	315	3003656
813	15.6	0.8	0.0	chr4	153160451	153160572	(37053983)	C	AluJr	SINE/Alu	(189)	123	1	3004128
1739	17.0	0.0	4.7	chr4	153160592	153160908	(37053647)	C	AluJb	SINE/Alu	(10)	302	1	3004129
43	2.3	0.0	0.0	chr4	153466265	153466308	(36748247)	+	(GCGGG)n	Simple_repeat	1	44	(0)	3004724
54	0.0	0.0	0.0	chr4	153789506	153789551	(36425004)	+	(GT)n	Simple_repeat	1	46	(0)	3005188
196	34.5	1.8	7.6	chr4	155897807	155897879	(34316676)	C	L2b	LINE/L2	(255)	3120	3052	3008073
3652	12.1	5.5	3.6	chr4	155898095	155899188	(34315367)	C	MER11A	LTR/ERVK	(0)	1236	1	3008075
83	19.3	3.7	0.0	chr4	155909819	155910007	(34304548)	+	(CTCTC)n	Simple_repeat	1	196	(0)	3008089
15	22.3	0.0	2.3	chr4	156971179	156971222	(33243333)	+	G-rich	Low_complexity	1	44	(0)	3009493
16	18.9	0.0	0.0	chr4	156971396	156971425	(33243130)	+	(C)n	Simple_repeat	1	30	(0)	3009494
17	22.0	5.8	4.3	chr4	156971449	156971535	(33243020)	+	(GGCGCC)n	Simple_repeat	1	92	(0)	3009495
13	13.7	4.3	6.2	chr4	158768828	158768873	(31445682)	+	(CCGC)n	Simple_repeat	1	48	(0)	3011882
24	18.2	0.9	2.6	chr4	158768897	158768961	(31445594)	+	(GCC)n	Simple_repeat	1	63	(0)	3011883
23	26.8	3.9	2.8	chr4	158769107	158769209	(31445346)	+	(GCC)n	Simple_repeat	1	107	(0)	3011884
13	18.3	0.0	5.3	chr4	158769379	158769423	(31445132)	+	G-rich	Low_complexity	1	42	(0)	3011885
13	28.0	0.0	0.0	chr4	159103096	159103138	(31111417)	+	(GCAGGA)n	Simple_repeat	1	43	(0)	3012414
30	18.8	2.7	1.3	chr4	159103388	159103461	(31111094)	+	(GGC)n	Simple_repeat	1	76	(0)	3012415
19	19.2	0.0	3.9	chr4	159103843	159103893	(31110662)	+	GA-rich	Low_complexity	1	51	(0)	3012416
19	14.4	9.3	0.0	chr4	159103984	159104037	(31110518)	+	(GCC)n	Simple_repeat	1	59	(0)	3012417
18	22.1	2.4	7.0	chr4	159104055	159104138	(31110417)	+	(GCGG)n	Simple_repeat	1	86	(0)	3012418
6435	8.9	16.4	3.0	chr4	161290810	161291899	(28922656)	+	MER11A	LTR/ERVK	3	1266	(0)	3015146
511	29.4	10.6	7.1	chr4	161291927	161292089	(28922466)	C	L1M5	LINE/L1	(491)	5751	5562	3015147
11116	9.8	1.4	1.3	chr4	161303947	161305525	(28909030)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3015162
2247	11.0	4.9	3.6	chr4	161305526	161305884	(28908671)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3015162
3112	9.1	1.8	0.0	chr4	162194482	162194931	(28019624)	C	L1PA13	LINE/L1	(1043)	5103	4646	3016385
580	8.8	2.8	2.4	chr4	162194932	162195079	(28019476)	+	L1PA13	LINE/L1	5110	5349	(797)	3016385
5960	11.2	1.8	0.0	chr4	162195086	162196018	(28018537)	C	L1PB1	LINE/L1	(0)	6151	5202	3016386
289	29.8	7.5	1.9	chr4	163484652	163484940	(26729615)	C	L1ME3G	LINE/L1	(40)	852	537	3018125
1462	19.7	6.7	4.5	chr4	163485079	163485504	(26729051)	C	LTR55	LTR/ERVL?	(112)	436	1	3018126
16	16.3	4.9	0.0	chr4	165207420	165207460	(25007095)	+	(GCCC)n	Simple_repeat	1	43	(0)	3020741
25	14.7	0.0	0.0	chr4	165207463	165207507	(25007048)	+	(CAG)n	Simple_repeat	1	45	(0)	3020742
13	21.2	2.1	4.2	chr4	167234067	167234113	(22980442)	+	(CCG)n	Simple_repeat	1	48	(0)	3023322
690	22.9	0.0	0.0	chr4	168477946	168478063	(21736492)	+	AluJr	SINE/Alu	1	118	(194)	3024868
569	30.1	5.4	6.2	chr4	168478124	168478364	(21736191)	+	MLT1J2-int	LTR/ERVL-MaLR	345	583	(804)	3024865
12	5.5	0.0	0.0	chr4	169271019	169271037	(20943518)	+	(CGC)n	Simple_repeat	1	19	(0)	3026073
15	8.1	0.0	3.6	chr4	169271052	169271079	(20943476)	+	(AGG)n	Simple_repeat	1	28	(0)	3026074
219	33.8	2.7	0.0	chr4	170089444	170089514	(20125041)	+	L2b	LINE/L2	3290	3362	(25)	3027352
16	17.4	8.8	2.7	chr4	170089984	170090051	(20124504)	+	(GCCGC)n	Simple_repeat	1	74	(0)	3027354
5223	12.8	4.2	0.2	chr4	171674326	171675115	(18539440)	+	LTR1B	LTR/ERV1	2	824	(0)	3029291
3198	16.9	9.3	2.4	chr4	171675116	171675231	(18539324)	C	MER50	LTR/ERV1	(618)	116	3	3029290
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
14	23.7	6.6	4.1	chr4	173169215	173169305	(17045250)	+	(CGCGGC)n	Simple_repeat	1	97	(0)	3031239
12	7.5	6.7	3.1	chr4	173169705	173169734	(17044821)	+	(CCCG)n	Simple_repeat	1	32	(0)	3031240
13	21.7	0.0	2.6	chr4	173169735	173169742	(17044813)	+	(CCCCAGC)n	Simple_repeat	2	39	(0)	3031241
12	16.3	2.8	2.7	chr4	173169848	173169883	(17044672)	+	(TGCCGGC)n	Simple_repeat	1	37	(0)	3031242
59	3.5	0.0	0.0	chr4	173183033	173183091	(17031464)	+	(CA)n	Simple_repeat	1	59	(0)	3031261
6491	5.4	0.5	10.8	chr4	173183492	173184653	(17029902)	C	SVA_B	Retroposon/SVA	(340)	1043	2	3031262
20	0.0	0.0	0.0	chr4	173370700	173370721	(16843834)	+	(A)n	Simple_repeat	1	22	(0)	3031514
244	32.3	3.6	1.5	chr4	174224658	174224792	(15989763)	+	L2	LINE/L2	2458	2595	(824)	3032666
138	9.6	0.0	1.9	chr4	174224793	174225004	(15989551)	+	(CTCCC)n	Simple_repeat	1	212	(0)	3032667
30	0.0	0.0	0.0	chr4	174225008	174225033	(15989522)	+	(TC)n	Simple_repeat	1	26	(0)	3032668
1917	14.3	0.0	2.4	chr4	174225052	174225344	(15989211)	C	AluJr	SINE/Alu	(21)	291	6	3032669
48005	6.1	0.5	0.3	chr4	176344247	176350257	(13864298)	+	HERVK9-int	LTR/ERVK	1	6021	(0)	3035422
12	20.2	2.9	0.0	chr4	180058629	180058662	(10155893)	+	(CCTCA)n	Simple_repeat	1	35	(0)	3040276
23	19.2	0.0	6.0	chr4	180058811	180058877	(10155678)	+	GA-rich	Low_complexity	1	67	(0)	3040277
16	16.0	4.5	2.2	chr4	180059139	180059182	(10155373)	+	(GGC)n	Simple_repeat	1	46	(0)	3040278
17	23.9	2.6	5.1	chr4	180483708	180483783	(9730772)	+	(ATAAT)n	Simple_repeat	1	78	(0)	3040802
379	22.2	1.3	2.2	chr4	180484262	180484350	(9730205)	+	FLAM_C	SINE/Alu	45	142	(160)	3040803
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
14	16.3	4.7	2.2	chr4	182144437	182144479	(8070076)	+	(GGAGGCG)n	Simple_repeat	1	45	(0)	3043030
23	21.4	2.7	2.6	chr4	182144582	182144655	(8069900)	+	(CGCCCC)n	Simple_repeat	1	76	(0)	3043031
24	19.1	3.6	7.8	chr4	182144670	182144780	(8069775)	+	(GGCGC)n	Simple_repeat	1	115	(0)	3043032
183	34.1	0.0	2.2	chr4	182269651	182269695	(7944860)	C	L3b	LINE/CR1	(22)	5210	5167	3043189
5263	15.5	1.9	2.7	chr4	182269734	182270644	(7943911)	C	MER4D	LTR/ERV1	(0)	903	1	3043190
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
28	10.0	0.0	0.0	chr4	182449187	182449230	(7765325)	+	(GCG)n	Simple_repeat	1	44	(0)	3043420
3843	3.7	0.0	0.0	chr4	182854759	182855220	(7359335)	C	LTR2	LTR/ERV1	(1)	462	1	3043987
359	27.8	9.3	5.1	chr4	182855289	182855504	(7359051)	C	L2a	LINE/L2	(1)	3425	3200	3043988
269	29.0	7.8	0.9	chr4	182855719	182855826	(7358729)	C	L2a	LINE/L2	(552)	2867	2752	3043988
345	27.0	4.3	0.0	chr4	182855885	182855995	(7358560)	C	LTR79	LTR/ERVL	(24)	503	388	3043989
13	6.2	7.9	4.9	chr4	183797083	183797120	(6417435)	+	(GAGGTGG)n	Simple_repeat	1	41	(0)	3045633
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
1776	16.8	8.4	10.2	chr4	186485078	186485382	(3729173)	C	LTR56	LTR/ERV1	(115)	330	16	3049725
56	25.1	2.4	1.7	chr4	186485383	186485568	(3728987)	+	(CCCTC)n	Simple_repeat	1	187	(0)	3049729
4593	8.4	4.4	2.8	chr4	186581760	186582786	(3631769)	+	MER11A	LTR/ERVK	1	1266	(0)	3049885
313	26.9	9.1	1.3	chr4	187181965	187182083	(3032472)	+	MIRb	SINE/MIR	37	163	(45)	3050665
249	22.6	1.4	0.9	chr4	187995378	187995449	(2219106)	C	L2b	LINE/L2	(4)	3383	3302	3051768
19	30.7	3.2	1.0	chr4	187995480	187995572	(2218983)	+	G-rich	Low_complexity	1	96	(0)	3051769
277	19.1	4.5	0.0	chr4	187995807	187995869	(2218686)	+	MER112	DNA/hAT-Charlie	103	168	(93)	3051770
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
305	21.4	8.4	1.0	chr5	141320	141418	(181396841)	C	MLT1C	LTR/ERVL-MaLR	(72)	395	289	3055090
1784	21.1	12.8	0.7	chr5	176397	176806	(181361453)	C	LTR24	LTR/ERV1	(0)	467	1	3055116
12	7.0	10.0	0.0	chr5	176865	176894	(181361365)	+	(GCCTGG)n	Simple_repeat	1	33	(0)	3055117
2878	24.7	7.2	2.8	chr5	176998	177490	(181360769)	C	L1MEg	LINE/L1	(2861)	3458	2946	3055118
1048	12.3	0.7	0.0	chr5	507406	507560	(181030699)	C	AluJb	SINE/Alu	(152)	160	5	3055473
12	11.6	3.3	3.2	chr5	1112029	1112058	(180426201)	+	(CCGCG)n	Simple_repeat	1	31	(0)	3055947
189	27.9	7.5	1.1	chr5	1414515	1414601	(180123658)	C	OldhAT1	DNA/hAT-Ac	(402)	2446	2354	3056228
12	18.3	0.0	3.0	chr5	1543853	1543885	(179994374)	+	(CCCTT)n	Simple_repeat	1	33	(0)	3056341
1006	9.3	0.7	0.0	chr5	1594932	1595071	(179943188)	C	AluJr4	SINE/Alu	(171)	141	1	3056396
12	27.8	3.5	1.7	chr5	1881046	1881103	(179657156)	+	(GGAGCGG)n	Simple_repeat	1	60	(0)	3056738
252	33.6	7.6	0.0	chr5	1901922	1902067	(179636192)	+	MLT1L	LTR/ERVL-MaLR	202	359	(251)	3056754
442	26.5	12.2	0.7	chr5	3275960	3276111	(178262148)	C	LTR16B2	LTR/ERVL	(4)	458	287	3058181
399	13.2	1.4	0.0	chr5	6774470	6774537	(174763722)	C	L1M4	LINE/L1	(696)	5478	5410	3062290
2265	16.0	1.3	1.8	chr5	7815810	7816197	(173722062)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	3	3063609
375	30.1	7.5	3.7	chr5	7816202	7816522	(173721737)	C	LTR33	LTR/ERVL	(162)	353	20	3063610
62	0.0	0.0	0.0	chr5	7850786	7850841	(173687418)	+	(GCCCAGCC)n	Simple_repeat	1	56	(0)	3063655
21	21.3	0.0	4.6	chr5	14144873	14144937	(167393322)	+	(GCGGCG)n	Simple_repeat	1	65	(0)	3071859
2509	19.3	9.3	10.9	chr5	14929207	14929957	(166608302)	+	MER21A	LTR/ERVL	187	924	(7)	3072898
30	18.2	0.0	0.0	chr5	17217607	17217664	(164320595)	+	(GGC)n	Simple_repeat	1	58	(0)	3076467
16	20.9	2.9	5.7	chr5	17217831	17217898	(164320361)	+	(GCCCC)n	Simple_repeat	1	70	(0)	3076468
4069	19.8	2.1	1.4	chr5	19592666	19593529	(161944730)	C	L1MB1	LINE/L1	(3)	6165	5296	3079569
60	24.8	2.2	1.6	chr5	19593533	19593707	(161944552)	+	(TCC)n	Simple_repeat	1	176	(0)	3079570
61	0.0	0.0	0.0	chr5	19593708	19593761	(161944498)	+	(CTT)n	Simple_repeat	1	54	(0)	3079571
1554	19.9	1.4	1.7	chr5	20906278	20906574	(160631685)	C	MSTA	LTR/ERVL-MaLR	(0)	428	133	3081269
1999	14.5	3.3	2.8	chr5	20906592	20906953	(160631306)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3081271
20	16.7	0.0	0.0	chr5	31193792	31193831	(150344428)	+	(CGG)n	Simple_repeat	1	40	(0)	3094575
12	17.0	2.2	6.5	chr5	31194028	31194072	(150344187)	+	G-rich	Low_complexity	1	46	(0)	3094576
192	35.5	6.2	1.9	chr5	31531632	31531786	(150006473)	+	L2b	LINE/L2	3196	3357	(18)	3095068
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
16	14.5	0.0	0.0	chr5	31640071	31640101	(149898158)	+	(CTCC)n	Simple_repeat	1	31	(0)	3095276
332	36.2	5.7	3.7	chr5	32130731	32131109	(149407150)	+	LTR84b	LTR/ERVL	46	432	(329)	3096218
317	25.3	2.6	0.0	chr5	32176397	32176471	(149361788)	C	L1ME4b	LINE/L1	(42)	850	774	3096328
836	21.8	5.6	0.4	chr5	32176485	32176689	(149361570)	+	MLT1F1	LTR/ERVL-MaLR	7	270	(309)	3096329
12	34.2	0.0	1.7	chr5	32312855	32312914	(149225345)	+	(GCG)n	Simple_repeat	1	60	(0)	3096591
18	3.7	3.6	0.0	chr5	32444238	32444265	(149093994)	+	(GCC)n	Simple_repeat	1	29	(0)	3096861
15	20.0	1.9	7.4	chr5	32444368	32444420	(149093839)	+	GA-rich	Low_complexity	1	54	(0)	3096862
197	20.6	5.2	2.1	chr5	33480808	33481402	(148056857)	+	(CCCCT)n	Simple_repeat	1	626	(0)	3098413
1785	23.1	2.0	1.5	chr5	34014885	34015288	(147522971)	+	MLT1F2-int	LTR/ERVL-MaLR	1081	1486	(3)	3099233
1651	25.1	6.6	6.9	chr5	34015301	34015849	(147522410)	+	MLT1F2	LTR/ERVL-MaLR	14	560	(0)	3099233
2535	7.0	0.0	0.0	chr5	34746104	34746404	(146791855)	C	AluY	SINE/Alu	(10)	301	1	3100335
192	21.1	8.8	3.7	chr5	35202253	35202306	(146335953)	+	MIR3	SINE/MIR	16	72	(136)	3101072
302	27.8	5.0	5.7	chr5	35202557	35202678	(146335581)	+	L2c	LINE/L2	3266	3386	(1)	3101073
6602	16.7	1.6	0.4	chr5	35456476	35457653	(146080606)	+	MSTA-int	LTR/ERVL-MaLR	2	1193	(458)	3101414
1337	21.5	4.3	0.7	chr5	35617351	35617638	(145920621)	C	AluSx3	SINE/Alu	(11)	300	2	3101644
15	15.9	2.9	0.0	chr5	35618094	35618128	(145920131)	+	(AGCGC)n	Simple_repeat	1	36	(0)	3101645
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
15	12.6	0.0	0.0	chr5	36876989	36877015	(144661244)	+	(GGA)n	Simple_repeat	1	27	(0)	3103487
19	4.0	0.0	0.0	chr5	36877200	36877225	(144661034)	+	(CGG)n	Simple_repeat	1	26	(0)	3103488
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
62	3.1	0.0	0.0	chr5	37606885	37606949	(143931310)	+	(CCCCT)n	Simple_repeat	1	65	(0)	3104808
2017	14.0	1.0	1.4	chr5	37606950	37607241	(143931018)	C	AluSx	SINE/Alu	(21)	291	1	3104809
915	21.3	2.9	2.9	chr5	37818574	37818668	(143719591)	C	MER20	DNA/hAT-Charlie	(120)	99	4	3105077
540	27.2	4.9	6.1	chr5	37818796	37819125	(143719134)	+	L2a	LINE/L2	3085	3383	(4)	3105076
15	22.2	3.7	1.8	chr5	37840055	37840108	(143698151)	+	G-rich	Low_complexity	1	56	(0)	3105101
14	19.9	4.2	2.0	chr5	39074435	39074482	(142463777)	+	(CCCCG)n	Simple_repeat	1	50	(0)	3107042
80	0.0	0.0	0.0	chr5	39075285	39075352	(142462907)	+	(AC)n	Simple_repeat	1	68	(0)	3107043
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
19	23.3	1.4	5.4	chr5	40798198	40798270	(140739989)	+	G-rich	Low_complexity	1	74	(0)	3109434
4608	9.8	5.4	5.9	chr5	40864387	40865439	(140672820)	+	MER11A	LTR/ERVK	1	1266	(0)	3109580
4064	17.4	8.3	6.2	chr5	41229864	41230906	(140307353)	+	MER11C	LTR/ERVK	1	1067	(4)	3110159
17642	10.2	3.5	1.2	chr5	43072721	43075264	(138462995)	C	HERVH48-int	LTR/ERV1	(4050)	2604	1	3112489
20	21.8	1.9	0.0	chr5	43556761	43556813	(137981446)	+	(CCGGCC)n	Simple_repeat	1	54	(0)	3113263
18	4.1	0.0	0.0	chr5	43556848	43556872	(137981387)	+	(CTC)n	Simple_repeat	1	25	(0)	3113264
34	5.3	0.0	0.0	chr5	50666898	50666937	(130871322)	+	(CCT)n	Simple_repeat	1	40	(0)	3116800
26	20.5	0.0	0.0	chr5	53480173	53480231	(128058028)	+	(CA)n	Simple_repeat	1	59	(0)	3120330
15	21.4	2.3	0.0	chr5	53480299	53480341	(128057918)	+	(CCCCACC)n	Simple_repeat	1	44	(0)	3120331
13	22.4	1.5	7.5	chr5	53480342	53480363	(128057896)	+	(TCCCCC)n	Simple_repeat	2	67	(0)	3120332
30	22.9	2.1	3.0	chr5	53480685	53480781	(128057478)	+	(GCGCCCC)n	Simple_repeat	1	99	(0)	3120333
6408	10.8	1.4	0.1	chr5	54392838	54394623	(127143636)	C	L1PREC2	LINE/L1	(3)	6157	4355	3121644
16	5.3	0.0	0.0	chr5	56078779	56078798	(125459461)	+	(A)n	Simple_repeat	1	20	(0)	3124417
470	29.6	7.6	3.3	chr5	57973117	57973329	(123564930)	C	ERVL-E-int	LTR/ERVL	(428)	5239	5017	3127485
1863	20.3	4.7	1.2	chr5	58962494	58962902	(122575357)	+	MSTB	LTR/ERVL-MaLR	1	424	(2)	3128862
350	35.8	12.6	3.3	chr5	59358409	59358651	(122179608)	+	MamTip2	DNA/hAT-Tip100	12	280	(25)	3129406
5369	11.3	0.4	1.6	chr5	60658495	60659284	(120878975)	+	LTR17	LTR/ERV1	1	780	(0)	3131136
3274	4.8	0.0	2.4	chr5	60971586	60971876	(120566383)	C	L1PA5	LINE/L1	(129)	6025	5741	3131605
1989	21.0	11.8	10.2	chr5	60971877	60971939	(120566320)	C	L1MC4	LINE/L1	(3834)	2381	2344	3131604
2391	10.6	0.0	0.0	chr5	60971940	60972240	(120566019)	C	AluSg	SINE/Alu	(9)	301	1	3131607
415	31.8	5.5	3.0	chr5	61275436	61275679	(120262580)	+	MIR	SINE/MIR	12	268	(0)	3132013
12	9.7	0.0	0.0	chr5	61332972	61332993	(120205266)	+	(CCGT)n	Simple_repeat	1	22	(0)	3132109
15	17.8	2.6	0.0	chr5	61333331	61333368	(120204891)	+	(GGCGG)n	Simple_repeat	1	39	(0)	3132110
12	18.0	8.8	4.0	chr5	62306381	62306448	(119231811)	+	(CTCCGCC)n	Simple_repeat	1	74	(0)	3133536
3858	8.8	3.2	1.6	chr5	62796768	62797769	(118740490)	C	MER11A	LTR/ERVK	(0)	1266	1	3134389
7864	5.8	11.6	4.0	chr5	64696005	64697166	(116841093)	+	MER11A	LTR/ERVK	1	1262	(4)	3136786
2795	6.7	0.3	0.0	chr5	65601290	65601635	(115936624)	C	THE1A	LTR/ERVL-MaLR	(0)	355	9	3138092
6593	12.0	2.0	0.5	chr5	65601606	65602601	(115935658)	C	THE1A-int	LTR/ERVL-MaLR	(569)	1011	1	3138092
14	24.5	0.0	5.2	chr5	65925454	65925511	(115612748)	+	G-rich	Low_complexity	1	58	(0)	3138686
18	20.4	5.6	2.7	chr5	65925578	65925648	(115612611)	+	(CTGCCCC)n	Simple_repeat	1	75	(0)	3138687
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
23	11.5	0.0	0.0	chr5	65926105	65926142	(115612117)	+	(GGAC)n	Simple_repeat	1	38	(0)	3138689
14	27.2	3.5	0.0	chr5	67004157	67004213	(114534046)	+	(GCCGCG)n	Simple_repeat	1	59	(0)	3140250
89	25.6	2.0	0.8	chr5	67720399	67720643	(113817616)	+	(CCCTC)n	Simple_repeat	1	250	(0)	3141184
16	14.5	0.0	0.0	chr5	68288513	68288543	(113249716)	+	(CGAGC)n	Simple_repeat	1	31	(0)	3142020
2537	19.7	7.9	2.3	chr5	68432132	68432730	(113105529)	C	L1MB1	LINE/L1	(2)	6166	5532	3142249
1798	20.4	0.3	3.8	chr5	68723096	68723414	(112814845)	+	AluJb	SINE/Alu	5	312	(0)	3142645
2852	12.0	0.9	6.0	chr5	68723415	68723820	(112814439)	C	MSTA	LTR/ERVL-MaLR	(35)	393	1	3142644
349	21.9	14.3	5.0	chr5	68747529	68747648	(112790611)	C	L2a	LINE/L2	(0)	3426	3294	3142674
9312	10.6	5.1	7.2	chr5	69244658	69245344	(112292915)	C	L1M1	LINE/L1	(1922)	5643	4988	3143595
2055	9.4	6.7	2.8	chr5	69245345	69245630	(112292629)	C	AluSz	SINE/Alu	(14)	298	1	3143598
16	9.8	0.0	0.0	chr5	69369224	69369245	(112169014)	+	(C)n	Simple_repeat	1	22	(0)	3143884
32	5.4	0.0	0.0	chr5	71750792	71750830	(109787429)	+	(TCT)n	Simple_repeat	1	39	(0)	3148021
1378	18.9	0.0	3.3	chr5	71750831	71751074	(109787185)	C	AluJr4	SINE/Alu	(30)	282	47	3148022
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
17	5.0	0.0	0.0	chr5	72109236	72109256	(109429003)	+	(A)n	Simple_repeat	1	21	(0)	3148508
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
1858	19.7	16.0	1.1	chr5	73117360	73117831	(108420428)	+	MLT1F1	LTR/ERVL-MaLR	14	569	(0)	3150023
599	25.0	11.1	0.5	chr5	73117832	73118032	(108420227)	+	L2a	LINE/L2	3097	3321	(105)	3150022
2925	12.7	5.1	1.9	chr5	73533948	73534109	(108004150)	+	LTR29	LTR/ERV1	462	622	(0)	3150651
4496	13.6	6.5	0.6	chr5	73534210	73534888	(108003371)	C	MER72	LTR/ERV1	(0)	722	1	3150655
362	37.5	5.3	4.1	chr5	73614185	73614426	(107923833)	C	L2c	LINE/L2	(42)	3345	3101	3150801
4694	10.8	10.2	0.6	chr5	73992285	73992981	(107545278)	C	LTR1F	LTR/ERV1	(0)	772	1	3151339
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
6787	16.5	2.7	0.9	chr5	74669967	74671075	(106867184)	+	LTR28C	LTR/ERV1	1	1129	(0)	3152328
12263	8.3	0.0	0.4	chr5	75161037	75162622	(106375637)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3153137
212	36.4	7.9	2.1	chr5	75336422	75336612	(106201647)	C	L2	LINE/L2	(640)	2779	2577	3153385
12	0.0	8.0	3.7	chr5	75511355	75511379	(106026880)	+	(CCG)n	Simple_repeat	1	27	(0)	3153647
13	8.8	0.0	3.9	chr5	75511436	75511461	(106026798)	+	(GCC)n	Simple_repeat	1	26	(0)	3153648
12	19.5	2.6	2.6	chr5	75511521	75511558	(106026701)	+	A-rich	Low_complexity	1	39	(0)	3153649
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
34	17.9	0.0	1.4	chr5	75611548	75611619	(105926640)	+	G-rich	Low_complexity	1	72	(0)	3153811
14	21.1	6.1	0.0	chr5	76716069	76716124	(104822135)	+	(CCGCGC)n	Simple_repeat	1	59	(0)	3155451
1611	24.1	8.6	3.5	chr5	76922015	76922062	(104616197)	C	L1MC5a	LINE/L1	(168)	2609	2563	3155875
2465	15.8	20.2	2.2	chr5	76922063	76922522	(104615737)	+	LTR48	LTR/ERV1	1	601	(186)	3155877
17	15.8	2.2	4.3	chr5	77492451	77492496	(104045763)	+	(GCG)n	Simple_repeat	1	47	(0)	3156732
467	22.1	17.6	5.4	chr5	77492785	77492932	(104045327)	C	MIRb	SINE/MIR	(23)	245	76	3156733
2204	12.0	0.3	0.0	chr5	77678651	77678942	(103859317)	C	AluSz	SINE/Alu	(18)	294	2	3156981
6464	12.2	2.2	2.5	chr5	77678943	77679137	(103859122)	+	L1MC1	LINE/L1	6144	6333	(0)	3156979
424	23.3	16.5	2.7	chr5	77679276	77679568	(103858691)	C	L1ME3Cz	LINE/L1	(765)	5381	5079	3156982
374	31.6	0.9	0.9	chr5	77911386	77911500	(103626759)	+	L2b	LINE/L2	3260	3374	(1)	3157368
400	35.2	0.0	0.0	chr5	77911646	77911770	(103626489)	+	L2b	LINE/L2	3251	3375	(0)	3157369
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
13	18.6	4.3	4.1	chr5	78648763	78648809	(102889450)	+	GA-rich	Low_complexity	1	49	(0)	3158378
16	28.6	0.0	1.8	chr5	78648818	78648874	(102889385)	+	(CCCGGC)n	Simple_repeat	1	57	(0)	3158379
20	19.9	5.7	4.3	chr5	78648874	78648961	(102889298)	+	G-rich	Low_complexity	1	93	(0)	3158380
54	22.9	1.4	2.0	chr5	79134001	79134145	(102404114)	+	GA-rich	Low_complexity	1	147	(0)	3159133
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
324	32.0	9.9	2.0	chr5	79938548	79938876	(101599383)	C	MLT1H	LTR/ERVL-MaLR	(18)	531	69	3160582
2371	9.9	3.0	0.0	chr5	79938937	79939230	(101599029)	C	AluSp	SINE/Alu	(10)	303	1	3160583
16	12.1	5.6	0.0	chr5	81394162	81394197	(100144062)	+	(CCCGC)n	Simple_repeat	1	38	(0)	3163089
14	17.8	1.6	9.5	chr5	81394198	81394222	(100144037)	+	(GCCC)n	Simple_repeat	2	63	(0)	3163090
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
10603	10.9	3.4	0.0	chr5	85654494	85656020	(95882239)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3168772
2107	16.1	0.6	3.5	chr5	85656023	85656395	(95881864)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	3168772
8280	13.6	0.2	0.0	chr5	86565861	86567064	(94971195)	C	HERVE-int	LTR/ERV1	(2073)	5740	4535	3169957
12	14.4	6.2	0.0	chr5	87268414	87268445	(94269814)	+	G-rich	Low_complexity	1	34	(0)	3170896
22	8.1	0.0	6.7	chr5	88141323	88141367	(93396892)	+	(GGA)n	Simple_repeat	1	45	(0)	3171928
30	9.2	0.0	0.0	chr5	88141725	88141771	(93396488)	+	(CCCCCG)n	Simple_repeat	1	47	(0)	3171929
38	0.0	0.0	0.0	chr5	88674110	88674142	(92864117)	+	(GT)n	Simple_repeat	1	33	(0)	3172656
42	8.0	0.0	0.0	chr5	88683985	88684038	(92854221)	+	(GT)n	Simple_repeat	1	54	(0)	3172664
15	18.2	0.0	2.6	chr5	88690966	88691004	(92847255)	+	(TTGGT)n	Simple_repeat	1	39	(0)	3172671
4315	10.5	2.3	1.6	chr5	89049753	89050765	(92487494)	+	MER11A	LTR/ERVK	1	1266	(0)	3173089
284	33.5	13.5	3.2	chr5	89050766	89050984	(92487275)	C	L3	LINE/CR1	(309)	3790	3546	3173088
11	27.4	1.6	4.8	chr5	90474401	90474462	(91063797)	+	GA-rich	Low_complexity	1	63	(0)	3174832
19	17.6	4.2	5.4	chr5	91383382	91383387	(90154872)	+	(GCGCC)n	Simple_repeat	1	24	(50)	3176169
12	24.6	3.6	3.5	chr5	91383388	91383443	(90154816)	+	(GCC)n	Simple_repeat	1	58	(0)	3176170
19	17.6	4.2	5.4	chr5	91383444	91383452	(90154807)	+	(GCGCC)n	Simple_repeat	25	74	(0)	3176169
2421	25.2	7.6	0.1	chr5	91720169	91720884	(89817375)	+	L1ME3	LINE/L1	5369	6142	(20)	3176630
1021	32.6	2.7	0.3	chr5	91720967	91721329	(89816930)	+	MLT1I	LTR/ERVL-MaLR	17	388	(23)	3176635
569	25.6	4.4	0.2	chr5	92435725	92435882	(89102377)	+	MER20	DNA/hAT-Charlie	1	167	(52)	3177463
22073	10.8	0.9	0.6	chr5	92435885	92441946	(89096313)	+	L1PA8A	LINE/L1	363	6446	(0)	3177464
5796	20.8	3.0	4.0	chr5	92793755	92795318	(88742941)	C	L1MD2	LINE/L1	(1388)	5156	3609	3177900
5087	18.8	2.2	3.3	chr5	92795340	92796402	(88741857)	C	MER11C	LTR/ERVK	(0)	1071	21	3177905
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
2434	10.0	0.8	0.8	chr5	94901057	94901420	(86636839)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3180411
17	21.0	0.0	5.5	chr5	95284055	95284109	(86254150)	+	GA-rich	Low_complexity	1	55	(0)	3180923
42	15.6	2.3	1.1	chr5	95284570	95284656	(86253603)	+	(CTC)n	Simple_repeat	1	89	(0)	3180924
22	9.5	0.0	0.0	chr5	95284666	95284699	(86253560)	+	(GCG)n	Simple_repeat	1	34	(0)	3180925
16	19.2	2.0	3.9	chr5	95731312	95731372	(85806887)	+	(GCAGCG)n	Simple_repeat	1	59	(0)	3181581
1770	17.7	1.0	1.7	chr5	96197764	96198062	(85340197)	C	AluJo	SINE/Alu	(15)	297	1	3182253
15	26.3	1.8	1.8	chr5	96936299	96936355	(84601904)	+	GA-rich	Low_complexity	1	57	(0)	3183366
1350	23.6	2.9	2.9	chr5	96950901	96951249	(84587010)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	42	3183387
2476	5.0	0.4	0.4	chr5	96951277	96951556	(84586703)	C	AluY	SINE/Alu	(30)	281	2	3183388
1272	17.6	7.1	14.0	chr5	100256181	100256531	(81281728)	+	Tigger3a	DNA/TcMar-Tigger	2	326	(22)	3187484
1991	17.3	1.8	5.5	chr5	100256572	100256874	(81281385)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	103	3187485
4487	8.4	6.0	1.6	chr5	102098527	102099508	(79438751)	C	MER11A	LTR/ERVK	(0)	1266	1	3189708
28	14.7	3.2	1.6	chr5	103258663	103258724	(78279535)	+	GA-rich	Low_complexity	1	64	(0)	3191197
15	33.0	0.0	1.8	chr5	103259272	103259326	(78278933)	+	(GC)n	Simple_repeat	1	55	(0)	3191198
13	27.9	0.0	0.0	chr5	103259393	103259435	(78278824)	+	(GCTC)n	Simple_repeat	1	43	(0)	3191199
4313	16.0	8.3	0.7	chr5	104627797	104628557	(76909702)	+	LTR1B	LTR/ERV1	1	824	(0)	3192896
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
22135	11.9	1.9	2.5	chr5	108422906	108429242	(73109017)	C	L1PA8A	LINE/L1	(28)	6288	5	3197624
97	21.4	3.2	4.4	chr5	108898398	108898705	(72639554)	+	(CTTTC)n	Simple_repeat	1	318	(0)	3198302
22	21.9	9.5	0.0	chr5	108898648	108898742	(72639517)	+	(CTAT)n	Simple_repeat	1	104	(0)	3198303
604	22.2	11.5	6.4	chr5	108898778	108898950	(72639309)	+	MER20	DNA/hAT-Charlie	37	219	(0)	3198304
116	20.9	1.3	3.6	chr5	108930333	108930633	(72607626)	+	(TCCCC)n	Simple_repeat	1	305	(0)	3198355
1833	16.4	2.4	0.0	chr5	108930634	108930913	(72607346)	C	AluSz	SINE/Alu	(25)	287	1	3198356
1619	16.2	1.7	2.4	chr5	109221159	109221649	(72316610)	+	LTR35A	LTR/ERV1	1	608	(0)	3198713
20	30.0	3.5	0.0	chr5	109689790	109689874	(71848385)	+	(GCG)n	Simple_repeat	1	88	(0)	3199330
11	16.7	5.9	0.0	chr5	111512568	111512601	(70025658)	+	(CCCAGCC)n	Simple_repeat	1	36	(0)	3201527
393	34.4	10.9	3.7	chr5	111861028	111861323	(69676936)	+	HAL1ME	LINE/L1	143	462	(2003)	3202001
230	30.4	8.8	6.9	chr5	111861409	111861553	(69676706)	+	L2c	LINE/L2	3108	3255	(132)	3202000
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
1673	19.0	3.2	5.7	chr5	113215402	113215787	(68322472)	+	MLT1A1	LTR/ERVL-MaLR	2	377	(31)	3203972
13	17.0	7.5	0.0	chr5	113295040	113295079	(68243180)	+	(GCAGA)n	Simple_repeat	1	43	(0)	3204072
23	10.0	0.0	0.0	chr5	113295173	113295205	(68243054)	+	(A)n	Simple_repeat	1	33	(0)	3204073
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
1152	25.1	5.1	10.7	chr5	116585116	116585508	(64952751)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	1	3208293
344	23.9	5.2	3.2	chr5	116585580	116585674	(64952585)	C	MamRep4096	DNA/hAT-Tip100	(13)	413	317	3208294
18	29.1	4.1	1.3	chr5	116585677	116585749	(64952510)	+	(AT)n	Simple_repeat	1	76	(0)	3208295
451	32.7	8.5	5.6	chr5	118487610	118487949	(63050310)	C	L2	LINE/L2	(562)	2857	2507	3210901
205	31.3	9.3	4.9	chr5	118488065	118488309	(63049950)	C	L2	LINE/L2	(1648)	1771	1515	3210901
25	23.3	0.0	4.0	chr5	122774960	122775035	(58763224)	+	G-rich	Low_complexity	1	76	(0)	3216418
2686	18.1	3.3	4.5	chr5	122924072	122924627	(58613632)	C	MER44B	DNA/TcMar-Tigger	(0)	550	2	3216679
782	29.8	3.6	2.5	chr5	122924652	122924895	(58613364)	C	MIRb	SINE/MIR	(19)	249	3	3216680
56	0.0	0.0	0.0	chr5	124274804	124274851	(57263408)	+	(GT)n	Simple_repeat	1	48	(0)	3218449
1439	19.1	9.0	7.0	chr5	124274965	124275419	(57262840)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	3218450
603	26.4	14.5	7.1	chr5	124329346	124329866	(57208393)	+	MER34A	LTR/ERV1	3	568	(3)	3218534
224	34.9	4.9	2.6	chr5	124329867	124330039	(57208220)	+	L2b	LINE/L2	3036	3215	(172)	3218533
4593	8.8	2.9	3.8	chr5	124382554	124383570	(57154689)	+	MER11A	LTR/ERVK	1	1266	(0)	3218599
7833	20.2	3.2	3.0	chr5	124383571	124387045	(57151214)	+	L1MB3	LINE/L1	1226	4769	(1610)	3218598
190	19.2	16.1	14.1	chr5	124629647	124629767	(56908492)	+	L2a	LINE/L2	3248	3371	(4)	3218892
5055	8.4	1.1	1.8	chr5	126072780	126073903	(55464356)	+	MER11A	LTR/ERVK	1	1265	(1)	3220750
17	12.5	0.0	0.0	chr5	126777237	126777262	(54760997)	+	(GT)n	Simple_repeat	1	26	(0)	3221959
18	32.4	1.9	3.7	chr5	128538382	128538488	(52999771)	+	G-rich	Low_complexity	1	109	(0)	3224262
14	22.0	0.0	0.0	chr5	129460162	129460198	(52078061)	+	(CCACC)n	Simple_repeat	1	37	(0)	3225347
20	19.5	3.3	1.6	chr5	129904392	129904451	(51633808)	+	GA-rich	Low_complexity	1	62	(0)	3225895
30	20.4	2.4	2.4	chr5	129904499	129904580	(51633679)	+	(GCC)n	Simple_repeat	1	84	(0)	3225896
15	10.8	3.3	0.0	chr5	131263905	131263934	(50274325)	+	(GGCGGG)n	Simple_repeat	1	31	(0)	3227655
14	27.8	1.4	4.2	chr5	131264260	131264329	(50273930)	+	G-rich	Low_complexity	1	71	(0)	3227656
683	20.6	14.3	0.0	chr5	131278456	131278635	(50259624)	+	MER63A	DNA/hAT-Blackjack	1	210	(0)	3227681
235	23.3	0.0	3.2	chr5	131278639	131278700	(50259559)	C	MADE2	DNA/TcMar-Mariner	(4)	76	17	3227682
43	10.3	1.2	3.7	chr5	131278708	131278788	(50259471)	+	(TCCCC)n	Simple_repeat	1	82	(0)	3227683
2106	13.6	0.7	0.0	chr5	131278789	131279082	(50259177)	C	AluSz	SINE/Alu	(14)	298	3	3227684
31	0.0	0.0	0.0	chr5	132228034	132228062	(49310197)	+	(GGAGCC)n	Simple_repeat	1	29	(0)	3229059
14	12.3	2.6	5.0	chr5	132963182	132963232	(48575027)	+	(CCCGG)n	Simple_repeat	1	49	(0)	3230229
17	30.3	0.0	1.6	chr5	132963394	132963455	(48574804)	+	(GGC)n	Simple_repeat	1	62	(0)	3230230
2295	23.0	4.0	8.6	chr5	133418741	133419118	(48119141)	C	L1ME1	LINE/L1	(11)	6168	5778	3230934
2124	12.0	0.7	1.0	chr5	134216259	134216557	(47321702)	+	AluSz	SINE/Alu	5	302	(10)	3232110
773	22.6	6.9	0.0	chr5	135488530	135488772	(46049487)	C	ORSL-2a	DNA/hAT-Tip100	(55)	287	27	3234366
406	25.2	3.2	0.8	chr5	135742779	135742898	(45795361)	+	L2a	LINE/L2	3270	3392	(34)	3234722
232	19.6	6.7	1.8	chr5	135742899	135742955	(45795304)	+	MER20	DNA/hAT-Charlie	2	61	(158)	3234723
69	10.8	1.7	0.8	chr5	135742959	135743073	(45795186)	+	(CCCCT)n	Simple_repeat	1	117	(0)	3234724
2127	12.8	1.3	0.0	chr5	135743075	135743371	(45794888)	C	AluSx1	SINE/Alu	(11)	301	1	3234725
2316	12.8	3.3	2.8	chr5	136021328	136021689	(45516570)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3235106
761	31.2	1.7	2.5	chr5	136021734	136021970	(45516289)	+	MIR	SINE/MIR	9	243	(19)	3235107
572	29.1	10.8	6.4	chr5	137515997	137516481	(44021778)	C	L2a	LINE/L2	(3)	3423	2915	3237074
15	25.4	4.0	3.8	chr5	137516909	137516984	(44021275)	+	G-rich	Low_complexity	1	79	(0)	3237075
20	17.5	5.4	1.7	chr5	137754199	137754254	(43784005)	+	GA-rich	Low_complexity	1	59	(0)	3237463
15	18.1	0.0	0.0	chr5	137754305	137754336	(43783923)	+	(GCC)n	Simple_repeat	1	32	(0)	3237464
306	16.0	0.0	0.0	chr5	138231537	138231586	(43306673)	C	MIR	SINE/MIR	(0)	262	213	3238413
2381	15.8	1.6	2.6	chr5	138277882	138278272	(43259987)	+	MSTB	LTR/ERVL-MaLR	1	387	(39)	3238529
781	15.9	15.8	0.0	chr5	138278290	138278427	(43259832)	+	AluSx3	SINE/Alu	133	296	(15)	3238530
1514	16.7	4.6	2.9	chr5	138311313	138311588	(43226671)	+	AluJr4	SINE/Alu	2	282	(30)	3238623
4825	15.0	4.0	5.8	chr5	138311589	138312223	(43226036)	+	L1MB2	LINE/L1	5057	5669	(502)	3238622
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
40	25.9	2.6	3.1	chr5	138753262	138753416	(42784843)	+	G-rich	Low_complexity	1	159	(0)	3239539
698	18.4	17.3	0.0	chr5	139245660	139245822	(42292437)	+	MIR	SINE/MIR	54	250	(12)	3240390
1706	10.6	14.1	0.4	chr5	139290179	139290434	(42247825)	C	AluSz	SINE/Alu	(15)	297	1	3240497
30	0.0	0.0	0.0	chr5	139290439	139290466	(42247793)	+	(T)n	Simple_repeat	1	28	(0)	3240498
1353	14.2	8.3	9.6	chr5	139290468	139290749	(42247510)	C	AluJb	SINE/Alu	(33)	279	2	3240499
12	10.8	6.7	0.0	chr5	139698867	139698896	(41839363)	+	(ATTTGC)n	Simple_repeat	1	32	(0)	3241326
409	31.2	11.0	3.6	chr5	139699198	139699390	(41838869)	C	MIRb	SINE/MIR	(31)	237	29	3241327
13	19.6	0.0	6.5	chr5	140042293	140042340	(41495919)	+	(CACCCC)n	Simple_repeat	1	44	(0)	3241896
24	17.4	7.6	1.2	chr5	140042801	140042879	(41495380)	+	(GCGGCT)n	Simple_repeat	1	85	(0)	3241897
18	0.0	0.0	3.9	chr5	140107832	140107857	(41430402)	+	(GCG)n	Simple_repeat	1	26	(0)	3242039
13	26.8	1.6	4.7	chr5	140107984	140108009	(41430250)	+	(CCT)n	Simple_repeat	1	45	(19)	3242040
13	7.6	7.1	0.0	chr5	140108010	140108037	(41430222)	+	(CCCG)n	Simple_repeat	1	30	(0)	3242041
13	26.8	1.6	4.7	chr5	140108038	140108046	(41430213)	+	(CCT)n	Simple_repeat	46	64	(0)	3242040
14	27.4	0.0	1.9	chr5	140113737	140113752	(41424507)	+	(CAGCAG)n	Simple_repeat	1	15	(0)	3242043
29	0.0	0.0	0.0	chr5	140113753	140113779	(41424480)	+	(GGT)n	Simple_repeat	1	27	(0)	3242044
14	27.4	0.0	1.9	chr5	140113780	140113815	(41424444)	+	(CAGCAG)n	Simple_repeat	4	39	(0)	3242045
25	26.6	2.1	2.1	chr5	140113868	140113960	(41424299)	+	G-rich	Low_complexity	1	95	(0)	3242046
61	27.6	3.0	3.6	chr5	140114062	140114330	(41423929)	+	(GGC)n	Simple_repeat	1	277	(0)	3242047
108	2.8	4.5	2.5	chr5	140419723	140419877	(41118382)	+	(TTTC)n	Simple_repeat	1	162	(0)	3242594
1781	22.9	2.3	11.7	chr5	140419878	140419917	(41118342)	C	L1MB7	LINE/L1	(951)	5195	5188	3242591
89	2.2	0.0	1.1	chr5	140419918	140420009	(41118250)	+	(CCCCT)n	Simple_repeat	1	92	(0)	3242595
1781	22.9	2.3	11.7	chr5	140420010	140420023	(41118236)	C	L1MB7	LINE/L1	(959)	5187	5178	3242591
1674	16.9	2.2	0.0	chr5	140420024	140420289	(41117970)	C	AluJr	SINE/Alu	(40)	272	1	3242596
973	25.9	3.2	1.6	chr5	141510529	141510775	(40027484)	C	MIR	SINE/MIR	(0)	262	12	3244122
408	22.9	2.0	2.0	chr5	141680690	141680831	(39857428)	C	MIR3	SINE/MIR	(119)	149	13	3244395
17	28.5	0.0	0.0	chr5	141878302	141878356	(39659903)	+	(GGCTGG)n	Simple_repeat	1	55	(0)	3244779
45	0.0	0.0	0.0	chr5	141878413	141878453	(39659806)	+	(GGC)n	Simple_repeat	1	41	(0)	3244780
23	16.2	4.5	2.9	chr5	141878478	141878543	(39659716)	+	(GCCC)n	Simple_repeat	1	69	(0)	3244781
16	0.0	0.0	0.0	chr5	142325276	142325292	(39212967)	+	(T)n	Simple_repeat	1	17	(0)	3245723
279	20.6	14.1	1.4	chr5	142325594	142325667	(39212592)	C	MamRep488	DNA/hAT-Tip100	(77)	142	58	3245724
267	35.4	6.5	2.5	chr5	142816504	142816738	(38721521)	C	L2c	LINE/L2	(230)	3157	2913	3246718
231	21.6	3.7	0.0	chr5	143389281	143389339	(38148920)	C	L3b	LINE/CR1	(21)	4078	4035	3247580
21	23.4	0.0	0.0	chr5	147782642	147782692	(33755567)	+	(CAG)n	Simple_repeat	1	51	(0)	3254832
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
304	27.8	8.6	7.0	chr5	149834947	149835082	(31703177)	+	MIR3	SINE/MIR	44	179	(89)	3258648
2689	4.5	0.0	0.3	chr5	150458374	150458685	(31079574)	+	AluY	SINE/Alu	1	311	(0)	3259991
29	18.4	3.2	5.1	chr5	150486179	150486273	(31051986)	+	G-rich	Low_complexity	1	98	(0)	3260073
24	27.4	3.6	2.6	chr5	150486521	150486630	(31051629)	+	(GCGG)n	Simple_repeat	1	114	(0)	3260074
244	32.9	6.8	0.7	chr5	151081330	151081482	(30456777)	C	MIR3	SINE/MIR	(16)	192	30	3261109
851	23.2	14.8	1.9	chr5	151153604	151153919	(30384340)	+	LTR37A	LTR/ERV1	53	416	(10)	3261265
207	26.9	6.2	0.0	chr5	151154067	151154151	(30384108)	C	MIRc	SINE/MIR	(118)	150	59	3261266
354	32.7	0.0	0.9	chr5	151154158	151154262	(30383997)	C	L2b	LINE/L2	(9)	3366	3263	3261267
39	23.4	2.6	1.7	chr5	151186368	151186480	(30351779)	+	G-rich	Low_complexity	1	116	(0)	3261340
12	24.5	4.5	0.0	chr5	151758558	151758601	(29779658)	+	(GGC)n	Simple_repeat	1	46	(0)	3262583
28	34.9	2.2	3.3	chr5	154682789	154682966	(26855293)	+	(CTCCCCC)n	Simple_repeat	1	182	(0)	3267769
1174	30.0	9.0	3.0	chr5	157463886	157464782	(24073477)	C	L2c	LINE/L2	(0)	3387	2421	3272720
590	26.7	11.6	0.5	chr5	157464786	157464992	(24073267)	+	MIR	SINE/MIR	30	262	(0)	3272721
15	9.7	0.0	0.0	chr5	157575230	157575251	(23963008)	+	(AG)n	Simple_repeat	1	22	(0)	3272957
930	36.0	4.8	5.9	chr5	158770156	158771045	(22767214)	+	L2b	LINE/L2	2516	3374	(1)	3275097
14	18.2	2.1	4.2	chr5	159062454	159062500	(22475759)	+	G-rich	Low_complexity	1	48	(0)	3275506
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
16600	17.4	4.4	1.0	chr5	159375661	159379760	(22158499)	+	L1PB2	LINE/L1	56	3366	(3549)	3275991
6381	9.5	15.9	3.2	chr5	159379761	159380860	(22157399)	C	MER11A	LTR/ERVK	(0)	1266	1	3275992
15	9.9	0.0	7.9	chr5	159916274	159916323	(21621936)	+	(CCCGCC)n	Simple_repeat	1	46	(0)	3276975
16	7.0	6.7	0.0	chr5	159916674	159916703	(21621556)	+	(CCT)n	Simple_repeat	1	32	(0)	3276976
203	25.0	5.3	0.0	chr5	160199162	160199233	(21339026)	+	X7A_LINE	LINE/CR1	41	116	(151)	3277634
12	20.9	0.0	4.8	chr5	160312606	160312647	(21225612)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	3277908
284	27.5	4.4	6.4	chr5	160357012	160357151	(21181108)	+	LTR78	LTR/ERV1	745	881	(423)	3278016
331	22.1	0.0	2.5	chr5	160357401	160357479	(21180780)	+	MER113	DNA/hAT-Charlie	441	517	(4)	3278017
498	29.7	1.4	0.7	chr5	164013487	164013625	(17524634)	+	MER117	DNA/hAT-Charlie	41	180	(17)	3283416
33	0.0	0.0	0.0	chr5	164296655	164296685	(17241574)	+	(CTGC)n	Simple_repeat	1	31	(0)	3283801
9390	12.5	4.9	5.1	chr5	164801513	164802782	(16735477)	C	THE1C-int	LTR/ERVL-MaLR	(305)	1275	1	3284479
2834	14.4	1.1	0.9	chr5	168482339	168482785	(13055474)	C	MER83	LTR/ERV1	(0)	448	1	3290149
337	20.5	24.9	4.7	chr5	168482786	168482839	(13055420)	+	Charlie2b	DNA/hAT-Charlie	266	317	(2465)	3290148
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
563	22.7	14.0	0.0	chr5	169838271	169838455	(11699804)	+	MIR	SINE/MIR	30	244	(18)	3292466
672	26.3	3.0	2.2	chr5	169907504	169907732	(11630527)	C	MIRb	SINE/MIR	(1)	267	37	3292592
961	9.3	2.6	8.0	chr5	169907733	169907895	(11630364)	+	MER20	DNA/hAT-Charlie	1	154	(65)	3292593
23212	11.9	1.3	1.7	chr5	171016773	171023237	(10515022)	C	L1PA8A	LINE/L1	(5)	6441	1	3294617
339	29.9	10.3	3.4	chr5	171388725	171388932	(10149327)	C	MIRb	SINE/MIR	(16)	252	29	3295187
14	21.5	4.0	1.9	chr5	171450923	171450972	(10087287)	+	(GCCCGC)n	Simple_repeat	1	52	(0)	3295313
16	19.2	2.0	3.9	chr5	171451034	171451097	(10087162)	+	(CCCCGCC)n	Simple_repeat	1	62	(0)	3295314
22	24.2	0.0	0.0	chr5	171451215	171451272	(10086987)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3295315
1021	24.3	13.9	4.7	chr5	171463266	171463769	(10074490)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	43	3295342
970	17.1	4.2	0.0	chr5	171463798	171463978	(10074281)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	3295343
1632	28.7	12.2	6.1	chr5	171464058	171464653	(10073606)	+	Charlie2b	DNA/hAT-Charlie	53	717	(2065)	3295344
928	19.9	8.2	0.0	chr5	171699560	171699760	(9838499)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3295865
473	29.4	5.5	0.0	chr5	172365276	172365411	(9172848)	C	MIRb	SINE/MIR	(85)	183	40	3297275
28	17.2	4.9	5.6	chr5	172454028	172454129	(9084130)	+	G-rich	Low_complexity	1	107	(0)	3297473
53	24.6	0.0	0.8	chr5	172734935	172735063	(8803196)	+	(TGTG)n	Simple_repeat	1	129	(0)	3298078
223	27.4	3.3	10.1	chr5	172735068	172735235	(8803024)	C	L2b	LINE/L2	(206)	3169	3018	3298079
242	26.5	18.9	2.5	chr5	172735283	172735599	(8802660)	C	L2b	LINE/L2	(571)	2848	2468	3298079
31	0.0	0.0	0.0	chr5	172834268	172834296	(8703963)	+	(GGCGAGT)n	Simple_repeat	1	29	(0)	3298313
17	17.7	2.1	4.1	chr5	172834301	172834348	(8703911)	+	(GGC)n	Simple_repeat	1	49	(0)	3298314
257	22.4	2.9	0.0	chr5	172835236	172835302	(8702957)	+	MIRb	SINE/MIR	18	86	(182)	3298315
22	18.0	2.6	6.2	chr5	173056577	173056654	(8481605)	+	G-rich	Low_complexity	1	80	(0)	3298842
23	22.7	3.1	5.0	chr5	173056875	173056970	(8481289)	+	G-rich	Low_complexity	1	99	(0)	3298843
2374	10.5	0.0	0.3	chr5	173132082	173132386	(8405873)	C	AluSq	SINE/Alu	(9)	304	1	3299006
90	4.7	1.4	4.7	chr5	173132406	173132551	(8405708)	+	(CCCTC)n	Simple_repeat	1	148	(0)	3299007
239	29.3	9.4	5.9	chr5	173132552	173132598	(8405661)	C	L1M7	LINE/L1	(80)	2385	2333	3299008
1951	11.3	0.3	10.8	chr5	173132599	173132933	(8405326)	C	AluSp	SINE/Alu	(12)	301	2	3299009
309	34.5	1.3	0.7	chr5	174045151	174045299	(7492960)	C	MIR	SINE/MIR	(21)	241	92	3300736
195	21.0	7.5	3.1	chr5	176360916	176360979	(5177280)	C	MIRb	SINE/MIR	(97)	171	105	3305093
32	0.0	0.0	2.9	chr5	176609769	176609803	(4928456)	+	(CCCGC)n	Simple_repeat	1	35	(0)	3305650
196	26.8	0.0	0.0	chr5	176610328	176610368	(4927891)	C	MIRc	SINE/MIR	(118)	150	110	3305651
2382	9.8	0.0	0.3	chr5	176969989	176970295	(4567964)	+	AluSx1	SINE/Alu	1	306	(6)	3306302
11	15.9	12.2	0.0	chr5	177133528	177133576	(4404683)	+	(CGGCAG)n	Simple_repeat	1	55	(0)	3306741
13	22.5	3.6	3.5	chr5	177133968	177134022	(4404237)	+	G-rich	Low_complexity	1	57	(0)	3306742
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
36	2.7	0.0	0.0	chr5	177497009	177497046	(4041213)	+	(GGGGA)n	Simple_repeat	1	38	(0)	3307529
17	13.5	0.0	0.0	chr5	177497383	177497415	(4040844)	+	(GGCGGG)n	Simple_repeat	1	33	(0)	3307530
8110	6.3	1.2	0.2	chr5	177561137	177562133	(3976126)	+	LTR13	LTR/ERVK	1	1007	(0)	3307628
195	22.5	19.2	0.0	chr5	177599872	177599951	(3938308)	+	MIR3	SINE/MIR	30	128	(80)	3307714
18	24.7	7.6	1.0	chr5	178113595	178113686	(3424573)	+	(CCGGCG)n	Simple_repeat	1	99	(0)	3308588
1529	24.6	4.4	0.3	chr5	178534081	178534430	(3003829)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3309353
2227	9.9	2.3	0.3	chr5	178534499	178534800	(3003459)	+	AluSx3	SINE/Alu	1	308	(3)	3309354
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
15	13.9	0.0	0.0	chr5	178627215	178627238	(2911021)	+	(C)n	Simple_repeat	1	24	(0)	3309511
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
2004	11.9	1.1	1.1	chr5	178895422	178895706	(2642553)	C	AluSq2	SINE/Alu	(16)	297	13	3310020
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
2638	20.7	12.2	7.0	chr5	179047634	179048458	(2489801)	C	MER21C	LTR/ERVL	(60)	878	5	3310286
34	16.9	1.0	7.0	chr5	179345199	179345258	(2193001)	+	(CGG)n	Simple_repeat	1	56	(0)	3310683
28	0.0	0.0	0.0	chr5	179345259	179345284	(2192975)	+	(GCA)n	Simple_repeat	1	26	(0)	3310684
34	16.9	1.0	7.0	chr5	179345285	179345322	(2192937)	+	(CGG)n	Simple_repeat	3	39	(0)	3310685
41	19.8	3.9	3.7	chr5	179345453	179345582	(2192677)	+	GA-rich	Low_complexity	1	135	(0)	3310686
18	19.8	2.1	2.0	chr5	179345616	179345663	(2192596)	+	(CGC)n	Simple_repeat	1	49	(0)	3310687
11	21.1	5.1	0.0	chr5	179351095	179351133	(2187126)	+	(GCCCCA)n	Simple_repeat	1	41	(0)	3310697
2217	8.0	0.0	5.5	chr5	179376203	179376349	(2161910)	+	AluSx1	SINE/Alu	1	133	(179)	3310732
19	9.8	0.0	2.9	chr5	179550513	179550547	(1987712)	+	(GCCC)n	Simple_repeat	1	35	(0)	3311065
24	26.9	0.0	0.0	chr5	179550600	179550667	(1987592)	+	G-rich	Low_complexity	1	68	(0)	3311066
2543	3.6	0.0	0.7	chr5	179632025	179632333	(1905926)	+	AluYa5	SINE/Alu	1	307	(4)	3311229
308	2.1	0.0	2.0	chr5	179632755	179632803	(1905456)	C	AluY	SINE/Alu	(0)	301	254	3311230
1132	10.2	3.2	3.2	chr5	179632804	179632851	(1905408)	C	AluSx1	SINE/Alu	(126)	186	137	3311231
1991	10.1	0.0	0.4	chr5	179632852	179633154	(1905105)	C	AluSc	SINE/Alu	(0)	309	3	3311232
1490	16.9	10.7	0.0	chr5	179688699	179688964	(1849295)	+	AluJb	SINE/Alu	1	298	(14)	3311376
1965	12.1	4.5	2.9	chr5	179688967	179689272	(1848987)	+	AluSz	SINE/Alu	1	311	(1)	3311377
2244	10.2	0.0	0.7	chr5	179689380	179689689	(1848570)	C	AluSq2	SINE/Alu	(0)	313	1	3311378
12	4.5	4.0	3.9	chr5	180071843	180071867	(1466392)	+	(CGC)n	Simple_repeat	1	26	(0)	3312026
760	22.0	9.2	2.7	chr5	180090027	180090173	(1448086)	C	MER96B	DNA/hAT	(236)	181	32	3312064
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
229	26.7	8.7	2.5	chr5	180291405	180291523	(1246736)	C	MIRb	SINE/MIR	(50)	218	92	3312361
15	20.0	0.0	5.9	chr5	180292171	180292221	(1246038)	+	G-rich	Low_complexity	1	51	(0)	3312366
2342	7.4	0.6	0.6	chr5	180292807	180293118	(1245141)	+	AluSx1	SINE/Alu	1	312	(0)	3312367
462	33.5	0.6	1.7	chr5	180318233	180318408	(1219851)	C	L2	LINE/L2	(505)	2914	2741	3312411
11	27.9	1.6	4.8	chr5	180619104	180619165	(919094)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3312984
17	26.4	4.6	1.5	chr5	180619152	180619216	(919043)	+	(GC)n	Simple_repeat	1	68	(0)	3312985
15	29.6	2.0	0.0	chr5	180809785	180809833	(728426)	+	(AC)n	Simple_repeat	1	50	(0)	3313277
18	17.4	7.3	2.7	chr5	180810096	180810163	(728096)	+	(CCAGGCC)n	Simple_repeat	1	73	(0)	3313278
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
271	21.2	6.3	8.5	chr5	181045691	181045819	(492440)	C	MamRep38	DNA/hAT	(36)	259	134	3313561
14	15.7	0.0	5.1	chr5	181052900	181052938	(485321)	+	G-rich	Low_complexity	1	39	(0)	3313573
33	21.0	0.0	3.4	chr5	181052978	181053065	(485194)	+	(CCCGCC)n	Simple_repeat	1	88	(0)	3313574
12	12.2	3.7	0.0	chr5	181053322	181053348	(484911)	+	(GGCGG)n	Simple_repeat	1	28	(0)	3313575
2130	4.3	0.7	2.5	chr5	181262211	181262489	(275770)	C	AluY	SINE/Alu	(7)	304	31	3313945
14	24.1	0.0	8.6	chr6	684159	684228	(170121751)	+	GA-rich	Low_complexity	1	70	(0)	3315100
1652	7.7	0.8	0.1	chr6	1355427	1355731	(169450248)	+	L1M4	LINE/L1	4217	4437	(2207)	3315989
51	17.8	4.8	4.3	chr6	1355734	1355873	(169450106)	+	GA-rich	Low_complexity	1	140	(0)	3315992
4057	17.4	5.4	4.2	chr6	1355874	1356463	(169449516)	+	L1MB7	LINE/L1	5200	5829	(355)	3315993
37	14.8	4.2	3.0	chr6	1382035	1382129	(169423850)	+	(GCGGAG)n	Simple_repeat	1	99	(0)	3316028
15	18.2	2.1	4.2	chr6	1388002	1388048	(169417931)	+	(CCACC)n	Simple_repeat	1	48	(0)	3316034
12	15.5	5.3	2.5	chr6	1388383	1388420	(169417559)	+	(CTCCCTC)n	Simple_repeat	1	40	(0)	3316035
12	11.1	6.9	0.0	chr6	1391719	1391747	(169414232)	+	(CCTCC)n	Simple_repeat	1	31	(0)	3316043
611	17.4	0.0	0.0	chr6	2505412	2505520	(168300459)	+	L1MA9	LINE/L1	6204	6312	(0)	3317536
16	23.0	1.5	5.8	chr6	2505626	2505693	(168300286)	+	(CCCTCA)n	Simple_repeat	1	69	(0)	3317537
15	23.0	0.0	5.4	chr6	3157761	3157816	(167648163)	+	G-rich	Low_complexity	1	56	(0)	3318484
32	3.0	0.0	0.0	chr6	3457092	3457125	(167348854)	+	(CTC)n	Simple_repeat	1	34	(0)	3318917
13	13.2	0.0	0.0	chr6	3751561	3751585	(167054394)	+	(CCCG)n	Simple_repeat	1	25	(0)	3319354
16	21.4	2.1	2.0	chr6	3752159	3752212	(167053767)	+	G-rich	Low_complexity	1	54	(0)	3319355
190	30.1	5.0	5.8	chr6	4645932	4646051	(166159928)	+	MER5B	DNA/hAT-Charlie	2	120	(58)	3320794
458	29.7	8.0	1.5	chr6	4646053	4646250	(166159729)	C	L4_C_Mam	LINE/RTE-X	(270)	4868	4657	3320795
334	31.7	1.9	0.0	chr6	5030818	5030921	(165775058)	+	MER3	DNA/hAT-Charlie	1	106	(103)	3321390
935	14.7	12.4	1.6	chr6	5031459	5031652	(165774327)	+	MER20	DNA/hAT-Charlie	2	219	(0)	3321391
11	14.8	4.9	4.7	chr6	5996328	5996368	(164809611)	+	(CCCCGCT)n	Simple_repeat	1	43	(0)	3322867
1578	10.5	0.5	0.0	chr6	6850071	6850280	(163955699)	C	AluSx	SINE/Alu	(17)	295	85	3324040
180	38.1	11.3	0.0	chr6	6850281	6850414	(163955565)	C	L2b	LINE/L2	(248)	3139	2989	3324038
187	8.8	5.5	2.9	chr6	6850593	6850627	(163955352)	C	MER5A	DNA/hAT-Charlie	(26)	163	128	3324041
2337	9.0	0.0	0.3	chr6	6850631	6850931	(163955048)	+	AluSc	SINE/Alu	1	300	(9)	3324042
2182	10.2	5.5	0.0	chr6	6963353	6963646	(163842333)	+	AluSp	SINE/Alu	1	311	(2)	3324290
2328	11.2	0.0	0.6	chr6	6963796	6964108	(163841871)	+	AluSx1	SINE/Alu	2	312	(0)	3324291
18	6.9	3.0	2.9	chr6	7052592	7052624	(163753355)	+	(GGA)n	Simple_repeat	1	34	(0)	3324483
34	2.8	0.0	0.0	chr6	7107674	7107709	(163698270)	+	(CGC)n	Simple_repeat	1	36	(0)	3324624
26	0.0	3.0	2.9	chr6	7108317	7108349	(163697630)	+	(TCC)n	Simple_repeat	1	34	(0)	3324625
706	25.8	11.1	6.9	chr6	7398962	7399307	(163406672)	+	LTR84b	LTR/ERVL	56	417	(344)	3325075
13	17.0	3.0	0.0	chr6	7727218	7727250	(163078729)	+	(GGCCCC)n	Simple_repeat	1	34	(0)	3325637
24	25.3	0.0	0.0	chr6	7727253	7727313	(163078666)	+	(CAG)n	Simple_repeat	1	61	(0)	3325638
1766	19.8	12.1	0.7	chr6	7765653	7766070	(163039909)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	27	3325691
474	31.9	9.2	1.8	chr6	7997139	7997358	(162808621)	C	MIR	SINE/MIR	(10)	252	15	3326003
17	15.6	0.0	2.6	chr6	10404466	10404503	(160401476)	+	G-rich	Low_complexity	1	38	(0)	3329445
18	4.8	0.0	0.0	chr6	10881919	10881940	(159924039)	+	(AG)n	Simple_repeat	1	22	(0)	3330382
2015	10.3	4.6	2.3	chr6	10882274	10882573	(159923406)	C	AluSg	SINE/Alu	(3)	307	1	3330383
276	25.3	1.1	11.7	chr6	11008696	11008798	(159797181)	+	MIRc	SINE/MIR	146	237	(31)	3330568
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
3989	16.6	3.9	0.8	chr6	11102745	11103449	(159702530)	C	MER50	LTR/ERV1	(7)	727	1	3330744
20	11.2	0.0	0.0	chr6	12011271	12011299	(158794680)	+	(C)n	Simple_repeat	1	29	(0)	3332070
22	20.3	2.7	4.0	chr6	12011623	12011695	(158794284)	+	G-rich	Low_complexity	1	75	(0)	3332071
1598	15.5	0.4	3.0	chr6	13846544	13846814	(156959165)	+	AluJb	SINE/Alu	36	299	(13)	3335032
1062	19.4	7.7	2.2	chr6	13846824	13847248	(156958731)	C	MER74A	LTR/ERVL	(2)	556	50	3335033
40	17.6	1.1	3.1	chr6	14117549	14117643	(156688336)	+	G-rich	Low_complexity	1	96	(0)	3335494
25	25.2	0.0	3.5	chr6	15245200	15245284	(155560695)	+	G-rich	Low_complexity	1	85	(0)	3337657
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
26	24.5	0.0	0.0	chr6	16439339	16439405	(154366574)	+	G-rich	Low_complexity	1	67	(0)	3339525
18	23.3	0.0	0.0	chr6	16760221	16760273	(154045706)	+	(CCT)n	Simple_repeat	1	53	(0)	3340013
14	5.0	0.0	0.0	chr6	16760461	16760481	(154045498)	+	(GGC)n	Simple_repeat	1	21	(0)	3340014
2358	10.3	0.3	1.3	chr6	17085915	17086214	(153719765)	C	AluSx	SINE/Alu	(15)	297	1	3340512
6701	15.2	12.6	4.3	chr6	17205519	17206957	(153599022)	C	LTR12C	LTR/ERV1	(1)	1578	3	3340721
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
15	30.2	1.6	0.0	chr6	17393764	17393824	(153412155)	+	G-rich	Low_complexity	1	62	(0)	3341080
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
29	8.3	1.9	1.9	chr6	18263848	18263900	(152542079)	+	(TCC)n	Simple_repeat	1	54	(0)	3342727
18	28.7	1.1	5.3	chr6	18264204	18264298	(152541681)	+	(CGCC)n	Simple_repeat	1	90	(0)	3342728
21399	10.6	1.8	1.2	chr6	18656104	18662501	(152143478)	+	L1PA8A	LINE/L1	1	6444	(2)	3343415
1271	28.1	1.7	10.3	chr6	19211148	19211805	(151594174)	C	L1PA13	LINE/L1	(5901)	884	285	3344123
11	18.0	9.1	0.0	chr6	20403201	20403244	(150402735)	+	(GGTGGA)n	Simple_repeat	1	48	(0)	3345987
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
26	26.9	1.2	1.1	chr6	20403657	20403742	(150402237)	+	(CGCCCC)n	Simple_repeat	1	87	(0)	3345989
12	8.8	10.5	2.4	chr6	20403887	20403924	(150402055)	+	(GTTGAGCG)n	Simple_repeat	1	42	(0)	3345990
629	21.7	6.7	6.7	chr6	20416516	20416693	(150389286)	+	MER5A	DNA/hAT-Charlie	2	179	(10)	3346007
485	7.5	6.8	2.0	chr6	24358693	24359596	(146446383)	+	(TATATAT)n	Simple_repeat	1	965	(0)	3351758
781	18.4	0.0	0.0	chr6	24359617	24359730	(146446249)	+	AluJo	SINE/Alu	3	116	(196)	3351759
16	8.3	0.0	0.0	chr6	24359731	24359756	(146446223)	+	(GGAA)n	Simple_repeat	1	26	(0)	3351760
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
2123	10.1	0.7	7.6	chr6	25164392	25164818	(145641161)	+	MER11A	LTR/ERVK	912	1265	(1)	3353176
454	33.7	4.3	6.2	chr6	25164821	25164943	(145641036)	+	L2c	LINE/L2	3106	3224	(163)	3353174
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
242	26.7	9.7	1.5	chr6	25993070	25993202	(144812777)	C	L1ME3Cz	LINE/L1	(16)	981	837	3354453
1026	14.0	15.7	4.3	chr6	27601965	27602199	(143203780)	C	AluJo	SINE/Alu	(7)	305	39	3357200
13	0.0	0.0	0.0	chr6	27754388	27754404	(143051575)	+	(AAT)n	Simple_repeat	1	17	(0)	3357537
5834	16.7	13.8	1.3	chr6	28884291	28885405	(141920574)	C	LTR12C	LTR/ERV1	(1)	1578	302	3359386
5651	13.7	5.2	2.2	chr6	28885411	28886431	(141919548)	+	LTR12C	LTR/ERV1	654	1572	(7)	3359387
10191	12.0	1.4	0.6	chr6	29121271	29123639	(141682340)	+	L1PA15	LINE/L1	3777	6159	(6)	3359780
10059	11.7	1.5	1.1	chr6	29192499	29194875	(141611104)	+	L1PA15	LINE/L1	3777	6159	(6)	3359848
18	13.7	1.7	8.3	chr6	29632912	29632970	(141173009)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3360372
22	15.1	1.8	3.6	chr6	29633070	29633124	(141172855)	+	G-rich	Low_complexity	1	56	(0)	3360373
12	14.3	3.0	2.9	chr6	29633516	29633548	(141172431)	+	(AGAGGC)n	Simple_repeat	1	34	(0)	3360374
13	22.5	2.0	3.9	chr6	30345413	30345462	(140460517)	+	G-rich	Low_complexity	1	51	(0)	3361461
13	17.2	8.7	0.0	chr6	30556132	30556177	(140249802)	+	(TCTGCT)n	Simple_repeat	1	50	(0)	3361797
6372	10.0	16.8	2.7	chr6	30868808	30869890	(139936089)	+	MER11A	LTR/ERVK	1	1266	(0)	3362408
216	26.7	9.1	2.2	chr6	30869891	30869976	(139936003)	+	MIRc	SINE/MIR	158	252	(16)	3362409
939	27.7	5.6	2.3	chr6	30869989	30870009	(139935970)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	395	3362410
2446	8.4	0.3	0.0	chr6	30870010	30870308	(139935671)	+	AluSc8	SINE/Alu	2	301	(10)	3362411
24	8.0	3.2	7.8	chr6	30884426	30884487	(139921492)	+	G-rich	Low_complexity	1	64	(0)	3362440
26	18.8	4.0	1.3	chr6	30884551	30884654	(139921325)	+	(GCTCCCG)n	Simple_repeat	1	106	(0)	3362441
13	30.9	1.5	1.5	chr6	30884737	30884801	(139921178)	+	G-rich	Low_complexity	1	66	(0)	3362442
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
283	20.6	0.0	2.9	chr6	31739518	31739587	(139066392)	C	MIR	SINE/MIR	(6)	256	189	3363801
2294	8.3	2.0	0.0	chr6	31867825	31868113	(138937866)	C	AluSx1	SINE/Alu	(14)	298	4	3364061
585	28.8	1.6	12.0	chr6	31868354	31868501	(138937478)	C	MIRb	SINE/MIR	(1)	267	139	3364062
14	4.7	0.0	4.2	chr6	31902042	31902065	(138903914)	+	(GCG)n	Simple_repeat	1	24	(0)	3364126
19	8.9	3.5	8.5	chr6	31902313	31902418	(138903561)	+	(CGCCCG)n	Simple_repeat	1	100	(0)	3364127
24	9.6	2.1	4.1	chr6	32150512	32150559	(138655420)	+	(GGC)n	Simple_repeat	1	49	(0)	3364473
19	26.7	0.0	3.0	chr6	32150777	32150842	(138655137)	+	(TGG)n	Simple_repeat	1	66	(0)	3364474
11	18.1	2.4	4.8	chr6	32151723	32151763	(138654216)	+	G-rich	Low_complexity	1	42	(0)	3364475
27	19.7	0.0	0.0	chr6	32151949	32152000	(138653979)	+	G-rich	Low_complexity	1	52	(0)	3364476
21	7.4	0.0	9.6	chr6	32894148	32894199	(137911780)	+	(CTTCCCC)n	Simple_repeat	1	52	(0)	3365562
16	23.5	0.0	0.0	chr6	32970868	32970899	(137835080)	+	G-rich	Low_complexity	1	32	(0)	3365687
2183	11.0	0.0	2.9	chr6	33151696	33151843	(137654136)	+	AluSx1	SINE/Alu	1	146	(166)	3365913
7722	6.2	14.2	1.8	chr6	33151844	33152949	(137653030)	C	MER11A	LTR/ERVK	(0)	1266	1	3365914
20	2.5	9.5	2.2	chr6	33317743	33317784	(137488195)	+	(CCTCCG)n	Simple_repeat	1	46	(0)	3366188
17	29.4	3.1	1.5	chr6	33425578	33425642	(137380337)	+	GA-rich	Low_complexity	1	67	(0)	3366425
13	6.7	9.1	2.8	chr6	33425720	33425752	(137380227)	+	GA-rich	Low_complexity	1	36	(0)	3366426
14	13.0	6.5	4.1	chr6	33425973	33426018	(137379961)	+	G-rich	Low_complexity	1	49	(0)	3366427
15	18.0	0.0	7.8	chr6	33452934	33452984	(137352995)	+	(TCCC)n	Simple_repeat	1	51	(0)	3366467
18	6.1	2.6	5.1	chr6	33621352	33621389	(137184590)	+	(CGGG)n	Simple_repeat	1	39	(0)	3366871
18	12.2	0.0	0.0	chr6	33813095	33813121	(136992858)	+	(G)n	Simple_repeat	1	27	(0)	3367155
39	27.9	2.1	2.0	chr6	34392500	34392642	(136413337)	+	(CCG)n	Simple_repeat	1	146	(0)	3368274
54	0.0	0.0	0.0	chr6	34462415	34462460	(136343519)	+	(GT)n	Simple_repeat	1	46	(0)	3368457
17	16.8	2.5	0.0	chr6	34462555	34462594	(136343385)	+	(TCTCCCC)n	Simple_repeat	1	41	(0)	3368458
2024	14.8	0.0	1.3	chr6	34462992	34463296	(136342683)	+	AluJo	SINE/Alu	1	301	(11)	3368459
244	23.8	11.3	4.5	chr6	34473577	34473708	(136332271)	+	MIRb	SINE/MIR	2	143	(125)	3368482
1618	21.4	5.3	1.8	chr6	34473710	34474224	(136331755)	C	L1MC5	LINE/L1	(1)	9303	8696	3368483
14	15.7	0.0	5.1	chr6	34889208	34889246	(135916733)	+	G-rich	Low_complexity	1	39	(0)	3369411
37	7.2	1.7	1.6	chr6	34889502	34889561	(135916418)	+	(GGC)n	Simple_repeat	1	61	(0)	3369412
59	21.5	0.7	3.3	chr6	35213818	35213969	(135592010)	+	GA-rich	Low_complexity	1	153	(0)	3369926
19	24.2	6.0	1.1	chr6	35214250	35214333	(135591646)	+	(GCCCCGC)n	Simple_repeat	1	89	(0)	3369927
12	30.3	1.4	4.2	chr6	35921106	35921175	(134884804)	+	(CCCGCC)n	Simple_repeat	1	71	(0)	3371442
208	28.7	2.2	3.3	chr6	35921418	35921507	(134884472)	+	MIRc	SINE/MIR	121	209	(59)	3371443
213	28.3	13.8	0.0	chr6	36131612	36131717	(134674262)	C	MIR	SINE/MIR	(90)	172	50	3371856
12	14.4	0.0	0.0	chr6	36196746	36196769	(134609210)	+	(GGC)n	Simple_repeat	1	24	(0)	3371983
16	34.1	1.2	1.2	chr6	36196789	36196870	(134609109)	+	G-rich	Low_complexity	1	83	(0)	3371984
12	22.0	5.4	3.4	chr6	36196877	36196932	(134609047)	+	(CCGCG)n	Simple_repeat	1	59	(0)	3371985
743	31.2	12.9	1.8	chr6	36271383	36271773	(134534206)	C	L2a	LINE/L2	(3)	3423	2983	3372123
539	31.3	3.4	3.9	chr6	36271861	36271991	(134533988)	+	MIR	SINE/MIR	47	179	(83)	3372124
3705	9.8	4.0	0.2	chr6	36271992	36272500	(134533479)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3372125
46	2.3	0.0	0.0	chr6	36680308	36680351	(134125628)	+	(GT)n	Simple_repeat	1	44	(0)	3373075
19	20.2	2.9	4.3	chr6	36839487	36839554	(133966425)	+	G-rich	Low_complexity	1	70	(0)	3373405
12	9.7	5.4	5.1	chr6	36839950	36839986	(133965993)	+	(GGCTCCG)n	Simple_repeat	1	39	(0)	3373406
26	18.9	0.0	0.0	chr6	36840090	36840138	(133965841)	+	(GT)n	Simple_repeat	1	49	(0)	3373407
506	23.3	0.8	9.2	chr6	36874322	36874463	(133931516)	+	L2c	LINE/L2	3258	3387	(0)	3373481
14	17.1	1.9	7.4	chr6	37169943	37169995	(133635984)	+	(GGCCGG)n	Simple_repeat	1	54	(0)	3374135
23	24.5	3.5	2.3	chr6	37170158	37170242	(133635737)	+	(GGC)n	Simple_repeat	1	88	(0)	3374136
32	0.0	0.0	0.0	chr6	37170248	37170277	(133635702)	+	(GCA)n	Simple_repeat	1	30	(0)	3374137
35	20.9	0.0	0.0	chr6	37170434	37170510	(133635469)	+	(CAGCCA)n	Simple_repeat	1	77	(0)	3374138
35	32.1	0.0	3.2	chr6	37819784	37819806	(132986173)	+	(CCCGCC)n	Simple_repeat	1	35	(115)	3375438
19	11.5	8.1	4.5	chr6	37819807	37819868	(132986111)	+	(CGCC)n	Simple_repeat	1	67	(0)	3375439
35	32.1	0.0	3.2	chr6	37819869	37819939	(132986040)	+	(CCCGCC)n	Simple_repeat	36	150	(0)	3375438
3879	12.2	7.2	6.0	chr6	38699152	38700211	(132105768)	+	MER11A	LTR/ERVK	1	1067	(4)	3376816
330	27.5	18.4	2.4	chr6	38700368	38700572	(132105407)	C	MIRc	SINE/MIR	(21)	247	3	3376817
200	26.3	0.0	0.0	chr6	39057333	39057370	(131748609)	+	MIR	SINE/MIR	218	255	(7)	3377395
15798	13.6	4.3	1.1	chr6	41257681	41258900	(129547079)	+	L1PBa	LINE/L1	3	1275	(5588)	3380849
2576	15.1	2.1	2.3	chr6	41296875	41297079	(129508900)	+	MSTB	LTR/ERVL-MaLR	1	206	(220)	3380909
6895	9.0	16.1	0.7	chr6	41297080	41298148	(129507831)	C	MER11A	LTR/ERVK	(0)	1266	1	3380910
1439	17.2	10.5	3.5	chr6	41385836	41386119	(129419860)	C	AluJo	SINE/Alu	(6)	306	1	3381049
340	24.7	0.0	0.3	chr6	41386138	41386244	(129419735)	+	Charlie8	DNA/hAT-Charlie	2359	2427	(1)	3381050
404	29.3	6.0	6.0	chr6	41442605	41442804	(129363175)	+	MIRc	SINE/MIR	16	215	(53)	3381165
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
12	20.3	4.1	3.9	chr6	41546422	41546470	(129259509)	+	(GCCG)n	Simple_repeat	1	51	(0)	3381374
680	21.7	12.5	0.8	chr6	41716070	41716284	(129089695)	C	MIR	SINE/MIR	(15)	247	20	3381670
192	27.6	9.3	3.9	chr6	41716538	41716639	(129089340)	C	L2b	LINE/L2	(13)	3362	3255	3381671
183	36.2	1.9	2.8	chr6	42166344	42166451	(128639528)	C	L2c	LINE/L2	(6)	3381	3275	3382693
12	43.1	0.0	0.0	chr6	42452222	42452296	(128353683)	+	G-rich	Low_complexity	1	75	(0)	3383278
19	14.0	0.0	2.4	chr6	42453070	42453110	(128352869)	+	G-rich	Low_complexity	1	41	(0)	3383279
25	23.4	2.1	4.2	chr6	43076326	43076418	(127729561)	+	(CGGCTC)n	Simple_repeat	1	95	(0)	3384638
12	11.5	3.3	3.2	chr6	43076534	43076563	(127729416)	+	(CTG)n	Simple_repeat	1	31	(0)	3384639
14	39.3	1.1	1.1	chr6	43171522	43171610	(127634369)	+	(GCG)n	Simple_repeat	1	90	(0)	3384861
15	21.6	3.5	3.4	chr6	43285202	43285258	(127520721)	+	(CCCGG)n	Simple_repeat	1	59	(0)	3385062
13	17.5	0.0	2.9	chr6	43285400	43285433	(127520546)	+	(CCCCCA)n	Simple_repeat	1	34	(0)	3385063
30	26.8	4.2	1.6	chr6	43369433	43369552	(127436427)	+	(CGC)n	Simple_repeat	1	125	(0)	3385201
459	26.5	4.9	0.7	chr6	43760574	43760710	(127045269)	C	MIR3	SINE/MIR	(33)	175	33	3385972
13	13.1	0.0	0.0	chr6	43760974	43760998	(127044981)	+	(GTGT)n	Simple_repeat	1	25	(0)	3385973
346	27.6	5.6	2.9	chr6	43904772	43904909	(126901070)	+	L1ME4b	LINE/L1	707	848	(44)	3386223
55	0.0	0.0	1.9	chr6	43904910	43904963	(126901016)	+	(TTCC)n	Simple_repeat	1	54	(0)	3386224
148	1.1	3.6	3.5	chr6	43904973	43905165	(126900814)	+	(TCTT)n	Simple_repeat	1	200	(0)	3386225
28	20.7	2.8	0.0	chr6	44073379	44073450	(126732529)	+	(GCCCGC)n	Simple_repeat	1	74	(0)	3386516
19	6.5	3.1	0.0	chr6	44073528	44073559	(126732420)	+	(GGGAGG)n	Simple_repeat	1	33	(0)	3386517
20	21.1	0.0	0.0	chr6	44127515	44127553	(126678426)	+	(C)n	Simple_repeat	1	39	(0)	3386612
16	20.8	0.0	0.0	chr6	44127606	44127638	(126678341)	+	(C)n	Simple_repeat	1	33	(0)	3386612
220	33.0	14.0	1.7	chr6	44192670	44192906	(126613073)	+	L2b	LINE/L2	3057	3327	(48)	3386739
19	0.0	0.0	0.0	chr6	44257013	44257033	(126548946)	+	(CT)n	Simple_repeat	1	21	(0)	3386858
20	18.4	0.0	0.0	chr6	44388135	44388171	(126417808)	+	(C)n	Simple_repeat	1	37	(0)	3387105
4993	7.5	3.2	0.3	chr6	45236235	45236907	(125569072)	+	HERVK9-int	LTR/ERVK	1	693	(5328)	3388349
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
34	19.1	5.3	3.3	chr6	45422015	45422128	(125383851)	+	(GCG)n	Simple_repeat	1	120	(0)	3388617
2258	8.7	0.0	5.0	chr6	46376404	46376725	(124429254)	+	AluSx4	SINE/Alu	5	310	(0)	3390096
412	33.5	11.1	0.8	chr6	46377340	46377740	(124428239)	C	L4_C_Mam	LINE/RTE-X	(1108)	4030	3484	3390097
7160	8.3	17.6	0.6	chr6	46841884	46842932	(123963047)	+	MER11A	LTR/ERVK	1	1266	(0)	3390806
1423	28.3	8.0	6.8	chr6	46842933	46843095	(123962884)	C	LTR82B	LTR/ERVL	(195)	635	484	3390805
952	23.2	3.2	0.9	chr6	46843096	46843308	(123962671)	C	MER20	DNA/hAT-Charlie	(1)	218	1	3390807
4396	6.6	3.1	0.3	chr6	47315700	47316263	(123489716)	C	HERVK9-int	LTR/ERVK	(5441)	580	1	3391556
506	29.0	1.4	2.7	chr6	47337853	47338001	(123467978)	C	MIRb	SINE/MIR	(8)	260	114	3391592
495	33.6	9.5	2.5	chr6	47338273	47338516	(123467463)	C	MIRb	SINE/MIR	(0)	268	6	3391593
15	0.0	0.0	0.0	chr6	47478192	47478210	(123327769)	+	(GGA)n	Simple_repeat	1	19	(0)	3391825
5136	7.5	2.9	1.7	chr6	48152302	48153326	(122652653)	+	MER11A	LTR/ERVK	1	1266	(0)	3392788
19	15.5	3.7	3.6	chr6	50252448	50252501	(120553478)	+	(TAGA)n	Simple_repeat	1	56	(0)	3395467
1912	14.2	0.0	0.0	chr6	52606011	52606278	(118199701)	C	AluSz	SINE/Alu	(12)	300	33	3398802
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
20	25.2	0.0	7.6	chr6	53795054	53795075	(117010904)	+	(GCG)n	Simple_repeat	53	103	(0)	3400740
12	5.5	0.0	0.0	chr6	53795238	53795256	(117010723)	+	(GGC)n	Simple_repeat	1	19	(0)	3400742
1348	13.0	0.0	7.5	chr6	56352113	56352271	(114453708)	+	MER96B	DNA/hAT-Tip100	103	247	(170)	3404072
2888	0.3	0.0	0.0	chr6	56711810	56712106	(114093873)	+	AluYa5	SINE/Alu	1	297	(14)	3404491
15	9.4	5.6	2.6	chr6	56843474	56843509	(113962470)	+	G-rich	Low_complexity	1	38	(0)	3404689
62	4.5	0.0	0.0	chr6	56843699	56843767	(113962212)	+	(GGAGGGT)n	Simple_repeat	1	69	(0)	3404690
5280	10.7	2.8	0.7	chr6	57974586	57975348	(112830631)	+	LTR17	LTR/ERV1	1	780	(0)	3406396
6862	7.0	0.4	27.5	chr6	63163335	63165221	(107640758)	+	SVA_A	Retroposon/SVA	15	1387	(0)	3410081
1822	5.6	0.0	0.9	chr6	63687985	63688200	(107117779)	+	AluY	SINE/Alu	83	296	(15)	3410992
63	8.8	2.5	4.1	chr6	63688220	63688339	(107117640)	+	(TCCCC)n	Simple_repeat	1	123	(0)	3410993
2010	14.0	1.0	0.3	chr6	63688342	63688633	(107117346)	C	AluSx	SINE/Alu	(17)	295	2	3410994
30	30.2	2.4	2.3	chr6	68635173	68635298	(102170681)	+	(GC)n	Simple_repeat	1	129	(0)	3416917
13	17.5	0.0	2.9	chr6	71420193	71420226	(99385753)	+	(CGCGC)n	Simple_repeat	1	34	(0)	3420542
12	4.3	8.3	0.0	chr6	71420624	71420647	(99385332)	+	(AGG)n	Simple_repeat	1	26	(0)	3420543
276	27.0	6.3	1.3	chr6	72533563	72533637	(98272342)	+	L2a	LINE/L2	3347	3425	(1)	3421992
360	29.0	14.7	10.5	chr6	72533841	72534079	(98271900)	+	L2c	LINE/L2	3131	3381	(6)	3421993
259	3.1	0.0	0.0	chr6	73642246	73642277	(97163702)	+	MER57B1	LTR/ERV1	299	330	(71)	3423964
226	25.6	8.2	1.3	chr6	73642352	73642430	(97163549)	+	MIRb	SINE/MIR	17	101	(167)	3423965
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
3909	10.6	5.5	1.6	chr6	76157561	76158469	(94647510)	+	MER11A	LTR/ERVK	161	1266	(0)	3427339
2935	6.4	0.2	0.2	chr6	76158471	76158879	(94647100)	C	L1P3	LINE/L1	(1364)	4782	4374	3427340
2229	16.9	0.0	0.3	chr6	77411470	77411830	(93394149)	+	MER47A	DNA/TcMar-Tigger	1	360	(6)	3428784
4399	9.4	1.0	3.3	chr6	79890738	79891777	(90914202)	C	MER11A	LTR/ERVK	(0)	1266	1	3431922
236	20.9	15.2	1.0	chr6	79929018	79929115	(90876864)	+	MIR1_Amn	SINE/MIR	49	162	(46)	3431966
299	24.7	0.6	19.8	chr6	79929124	79929231	(90876748)	C	MER5A1	DNA/hAT-Charlie	(1)	165	76	3431967
1946	19.1	0.0	0.0	chr6	79929232	79929540	(90876439)	C	AluJb	SINE/Alu	(3)	309	1	3431968
22100	11.1	2.6	0.6	chr6	80427218	80431838	(90374141)	C	L1PA7	LINE/L1	(1)	6326	2307	3432598
392	35.6	6.5	11.1	chr6	82742919	82743421	(88062558)	C	L2c	LINE/L2	(0)	3387	2910	3435568
191	30.4	11.1	11.6	chr6	82743647	82743746	(88062233)	+	L3	LINE/CR1	3789	3892	(207)	3435569
2028	15.1	2.6	0.0	chr6	82743747	82744050	(88061929)	+	AluSx	SINE/Alu	1	312	(0)	3435570
8663	11.7	10.2	3.1	chr6	82930349	82931859	(87874120)	+	THE1C-int	LTR/ERVL-MaLR	8	1631	(0)	3435808
27	22.1	3.4	5.7	chr6	83512384	83512501	(87293478)	+	(CTCTCC)n	Simple_repeat	1	122	(0)	3436642
14	19.1	6.2	4.3	chr6	83708967	83709031	(87096948)	+	(CCCTGGC)n	Simple_repeat	1	69	(0)	3436867
12	20.8	0.0	2.9	chr6	83709044	83709078	(87096901)	+	(CCG)n	Simple_repeat	1	35	(0)	3436868
353	34.9	16.9	3.8	chr6	83873652	83873943	(86932036)	C	L2b	LINE/L2	(1)	3374	3037	3437100
71	6.2	0.0	0.0	chr6	83874110	83874195	(86931784)	+	(CCTCC)n	Simple_repeat	1	86	(0)	3437101
1774	14.7	3.5	4.4	chr6	83874201	83874493	(86931486)	C	AluJr	SINE/Alu	(22)	290	1	3437102
16	7.8	0.0	3.5	chr6	84033787	84033815	(86772164)	+	(GGC)n	Simple_repeat	1	29	(0)	3437334
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
16	6.4	2.6	7.5	chr6	85643496	85643534	(85162445)	+	(CCCCTC)n	Simple_repeat	1	40	(0)	3439345
20	24.0	2.4	4.6	chr6	85643596	85643680	(85162299)	+	(CCCCG)n	Simple_repeat	1	87	(0)	3439346
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
13	20.0	2.0	5.8	chr6	87156134	87156184	(83649795)	+	(CGCCTC)n	Simple_repeat	1	52	(0)	3441138
17	19.1	7.2	2.7	chr6	88166294	88166362	(82639617)	+	(TCGCTC)n	Simple_repeat	1	74	(0)	3442790
26333	8.1	4.7	2.2	chr6	88968614	88969093	(81836886)	+	MER61-int	LTR/ERV1	2490	3035	(2182)	3443860
7773	6.6	11.9	3.7	chr6	88969094	88970251	(81835728)	C	MER11A	LTR/ERVK	(0)	1266	1	3443864
16	21.3	2.3	0.0	chr6	89118080	89118123	(81687856)	+	G-rich	Low_complexity	1	45	(0)	3444211
987	7.8	2.3	0.0	chr6	89118489	89118616	(81687363)	C	AluJo	SINE/Alu	(181)	131	1	3444212
367	33.6	6.5	2.4	chr6	89283817	89284066	(81521913)	+	L3	LINE/CR1	3689	3949	(150)	3444500
1245	16.3	3.4	6.2	chr6	89284067	89284321	(81521658)	+	L1ME3	LINE/L1	5895	6140	(22)	3444501
1688	22.6	5.3	6.7	chr6	89284322	89284832	(81521147)	+	MLT1D	LTR/ERVL-MaLR	2	505	(0)	3444502
2163	13.7	0.3	0.6	chr6	89353269	89353581	(81452398)	C	AluJb	SINE/Alu	(0)	312	1	3444615
13	23.5	0.0	0.0	chr6	89412325	89412359	(81393620)	+	(CGCG)n	Simple_repeat	1	35	(0)	3444715
13	17.6	2.4	4.7	chr6	90296033	90296074	(80509905)	+	G-rich	Low_complexity	1	43	(0)	3446169
12	7.3	10.3	0.0	chr6	90296251	90296279	(80509700)	+	(TCGGC)n	Simple_repeat	1	32	(0)	3446170
32	3.0	0.0	0.0	chr6	90296785	90296818	(80509161)	+	(GCT)n	Simple_repeat	1	34	(0)	3446171
23	21.4	3.8	2.2	chr6	90297035	90297105	(80508874)	+	G-rich	Low_complexity	1	72	(0)	3446172
14	18.2	0.0	0.0	chr6	90586843	90586873	(80219106)	+	GA-rich	Low_complexity	1	31	(0)	3446604
275	26.3	8.5	0.5	chr6	90610844	90611056	(80194923)	C	MIR	SINE/MIR	(37)	231	5	3446640
2262	21.1	2.1	2.1	chr6	95285572	95286085	(75519894)	+	MER67D	LTR/ERV1	1	514	(0)	3452289
591	34.0	10.2	4.6	chr6	95286086	95286345	(75519634)	+	LTR81C	LTR/Gypsy	880	1153	(0)	3452288
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
334	23.7	8.2	1.5	chr6	96898100	96898236	(73907743)	C	MER5B	DNA/hAT-Charlie	(28)	150	4	3454286
41	0.0	0.0	0.0	chr6	96924802	96924836	(73881143)	+	(CA)n	Simple_repeat	1	35	(0)	3454325
13	23.7	6.6	1.5	chr6	98845227	98845287	(71960692)	+	(CCGC)n	Simple_repeat	1	65	(0)	3456781
12	8.0	7.4	0.0	chr6	98845843	98845869	(71960110)	+	(TCCTT)n	Simple_repeat	1	29	(0)	3456782
3892	21.2	2.7	3.0	chr6	102501989	102503018	(68302961)	C	L1MB3	LINE/L1	(1909)	4467	3441	3461622
3696	12.2	6.5	2.1	chr6	102503023	102504085	(68301894)	C	MER11A	LTR/ERVK	(0)	1236	1	3461623
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
48	29.5	3.2	0.0	chr6	106251634	106251789	(64554190)	+	GA-rich	Low_complexity	1	161	(0)	3466617
2174	11.2	0.3	1.7	chr6	106251838	106252133	(64553846)	C	AluSz	SINE/Alu	(14)	298	7	3466618
2365	9.1	0.4	0.0	chr6	106588829	106589104	(64216875)	+	AluSp	SINE/Alu	1	277	(36)	3467165
92	29.4	1.2	0.0	chr6	106589105	106589354	(64216625)	+	GA-rich	Low_complexity	1	253	(0)	3467166
19	28.9	2.3	2.2	chr6	107489989	107490075	(63315904)	+	(CCTCC)n	Simple_repeat	1	89	(0)	3468954
60	18.2	1.6	0.8	chr6	107490249	107490375	(63315604)	+	(GCG)n	Simple_repeat	1	129	(0)	3468955
239	34.8	6.3	4.7	chr6	107591403	107591574	(63214405)	C	L2b	LINE/L2	(190)	3197	3023	3469086
663	17.0	1.5	3.6	chr6	107591763	107591902	(63214077)	C	L1MC5	LINE/L1	(15)	9289	9153	3469088
22	10.1	0.0	0.0	chr6	107591961	107591992	(63213987)	+	(T)n	Simple_repeat	1	32	(0)	3469089
13	24.5	2.3	0.0	chr6	107947833	107947875	(62858104)	+	(CCCA)n	Simple_repeat	1	44	(0)	3469635
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
828	25.8	3.6	3.6	chr6	107964829	107965024	(62840955)	C	Arthur1B	DNA/hAT-Tip100	(599)	626	431	3469668
1852	12.8	10.6	0.0	chr6	107965025	107965329	(62840650)	+	MER61A	LTR/ERV1	1	341	(0)	3469669
828	25.8	3.6	3.6	chr6	107965330	107965381	(62840598)	C	Arthur1B	DNA/hAT-Tip100	(795)	430	378	3469668
2231	10.7	0.0	0.0	chr6	107965512	107965800	(62840179)	+	AluSg	SINE/Alu	1	289	(21)	3469670
13	20.8	0.0	0.0	chr6	108134183	108134215	(62671764)	+	(CCCTCC)n	Simple_repeat	1	33	(0)	3470017
11	24.1	0.0	0.0	chr6	108169970	108170003	(62635976)	+	(CCCTCC)n	Simple_repeat	1	34	(0)	3470083
25	22.3	0.0	4.1	chr6	108260931	108261003	(62544976)	+	(GCC)n	Simple_repeat	1	73	(0)	3470262
24	18.7	2.6	5.1	chr6	108293558	108293633	(62512346)	+	(TTCCC)n	Simple_repeat	1	78	(0)	3470344
2234	10.1	0.7	0.3	chr6	108293636	108293933	(62512046)	C	AluSx1	SINE/Alu	(13)	299	1	3470345
21	9.4	0.0	0.0	chr6	109455775	109455808	(61350171)	+	(GCGGGG)n	Simple_repeat	1	34	(0)	3472184
6786	7.0	17.6	0.5	chr6	110742100	110743147	(60062832)	+	MER11A	LTR/ERVK	1	1266	(0)	3474219
3606	15.1	4.8	6.8	chr6	110743148	110743189	(60062790)	+	L1M4	LINE/L1	2192	2229	(5288)	3474217
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
864	23.8	7.5	0.9	chr6	111130803	111131014	(59674965)	+	MIR	SINE/MIR	1	227	(35)	3475083
2774	8.8	13.5	1.5	chr6	111131018	111131478	(59674501)	+	LTR17	LTR/ERV1	256	780	(0)	3475084
20	25.2	2.1	5.3	chr6	111482653	111482745	(59323234)	+	(GCCGGC)n	Simple_repeat	1	95	(0)	3475664
19	23.4	0.0	0.0	chr6	111482928	111482977	(59323002)	+	(CGGCAG)n	Simple_repeat	1	50	(0)	3475665
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
12	31.3	2.6	3.8	chr6	111872300	111872376	(58933603)	+	G-rich	Low_complexity	1	79	(0)	3476291
17	9.7	2.9	2.8	chr6	111872875	111872909	(58933070)	+	(GCG)n	Simple_repeat	1	36	(0)	3476292
16	18.7	4.7	0.0	chr6	111873142	111873184	(58932795)	+	(GGC)n	Simple_repeat	1	45	(0)	3476293
12	16.9	2.9	2.8	chr6	111873420	111873454	(58932525)	+	(GCT)n	Simple_repeat	1	36	(0)	3476294
22177	10.9	1.6	3.0	chr6	111929040	111935422	(58870557)	C	L1PA7	LINE/L1	(35)	6434	1	3476391
2415	8.6	0.0	0.0	chr6	111935428	111935718	(58870261)	C	AluSc	SINE/Alu	(16)	293	3	3476392
3372	15.1	1.7	2.7	chr6	111941763	111942400	(58863579)	C	L1MB3	LINE/L1	(3)	6180	5549	3476404
59	18.9	5.9	3.7	chr6	113204709	113204911	(57601068)	+	GA-rich	Low_complexity	1	215	(0)	3478115
27	0.0	0.0	0.0	chr6	113855011	113855036	(56950943)	+	(T)n	Simple_repeat	1	26	(0)	3479244
21	8.6	0.0	4.9	chr6	113855097	113855137	(56950842)	+	(CCCCG)n	Simple_repeat	1	41	(0)	3479245
17	25.1	0.0	7.4	chr6	113855186	113855266	(56950713)	+	(CCCCTC)n	Simple_repeat	1	81	(0)	3479246
34	8.6	2.0	0.0	chr6	113896764	113896813	(56909166)	+	(AG)n	Simple_repeat	1	51	(0)	3479309
18	8.7	0.0	0.0	chr6	113896929	113896953	(56909026)	+	(T)n	Simple_repeat	1	25	(0)	3479310
2582	6.1	0.0	0.0	chr6	113896954	113897279	(56908700)	C	LTR17	LTR/ERV1	(454)	326	1	3479311
14	15.3	2.6	2.6	chr6	113970813	113970850	(56835129)	+	(GCCCG)n	Simple_repeat	1	39	(0)	3479421
26	0.0	0.0	0.0	chr6	113970946	113970970	(56835009)	+	(CTG)n	Simple_repeat	1	25	(0)	3479422
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
856	18.0	4.1	0.5	chr6	113981750	113981939	(56824040)	C	L1MC4	LINE/L1	(574)	7468	7272	3479448
823	23.1	9.3	1.9	chr6	113981940	113982208	(56823771)	C	MLT1G3	LTR/ERVL-MaLR	(299)	296	6	3479449
11	21.0	2.5	2.4	chr6	114342591	114342630	(56463349)	+	(GCCGGA)n	Simple_repeat	1	41	(0)	3479981
16	31.6	4.7	0.0	chr6	114343041	114343047	(56462932)	+	(CTCCCG)n	Simple_repeat	1	25	(65)	3479982
19	21.9	4.6	1.5	chr6	114343048	114343112	(56462867)	+	(CTC)n	Simple_repeat	1	68	(0)	3479983
16	31.6	4.7	0.0	chr6	114343113	114343126	(56462853)	+	(CTCCCG)n	Simple_repeat	26	90	(0)	3479982
452	31.1	13.9	4.7	chr6	115946510	115947002	(54858977)	C	L2	LINE/L2	(966)	2453	1908	3481921
431	28.0	3.1	5.4	chr6	115947101	115947266	(54858713)	+	L1ME3B	LINE/L1	6063	6224	(18)	3481922
3675	6.3	0.4	0.0	chr6	116321929	116322389	(54483590)	C	LTR2	LTR/ERV1	(0)	463	1	3482421
858	35.6	6.7	0.3	chr6	116930353	116931089	(53874890)	C	L2a	LINE/L2	(7)	3419	2627	3483260
16	20.0	4.3	0.0	chr6	117265452	117265497	(53540482)	+	(CCCCCG)n	Simple_repeat	1	48	(0)	3483669
1972	20.1	4.7	2.2	chr6	117753143	117753636	(53052343)	+	L1MA9	LINE/L1	5978	6484	(530)	3484283
508	23.3	0.0	0.0	chr6	117753642	117753727	(53052252)	+	AluJo	SINE/Alu	133	218	(94)	3484289
60	7.5	0.0	0.0	chr6	117753771	117753854	(53052125)	+	(AGGGG)n	Simple_repeat	1	84	(0)	3484290
2178	20.4	3.8	1.9	chr6	117753855	117753913	(53052066)	+	L1MA9	LINE/L1	6474	6526	(488)	3484283
2052	11.5	4.0	1.1	chr6	117753914	117754200	(53051779)	+	AluSx1	SINE/Alu	1	296	(16)	3484291
3884	11.9	4.7	0.8	chr6	118579711	118580329	(52225650)	+	LTR9B	LTR/ERV1	1	644	(0)	3485361
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
23	12.6	0.0	0.0	chr6	118893825	118893864	(51912115)	+	(A)n	Simple_repeat	1	40	(0)	3485823
24	17.9	5.4	2.6	chr6	118893924	118893997	(51911982)	+	(CCG)n	Simple_repeat	1	78	(0)	3485824
3185	9.6	5.3	0.5	chr6	118951353	118951801	(51854178)	+	MER4A1	LTR/ERV1	1	472	(0)	3485899
12467	11.1	1.4	0.0	chr6	119082302	119083909	(51722070)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	3486089
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
3303	26.7	11.3	3.8	chr6	119559228	119560473	(51245506)	C	MLT1H-int	LTR/ERVL-MaLR	(56)	1353	2	3486733
813	22.8	7.4	8.9	chr6	121211000	121211299	(49594680)	+	L1MC5a	LINE/L1	403	695	(197)	3488672
18	7.0	0.0	3.1	chr6	121334481	121334521	(49471458)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	3488811
9482	12.6	7.2	3.9	chr6	121801011	121802583	(49003396)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3489607
15	26.9	2.6	5.0	chr6	123803350	123803427	(47002552)	+	(CGC)n	Simple_repeat	1	80	(0)	3492190
18	18.7	0.0	5.6	chr6	123803630	123803683	(47002296)	+	(CCCCG)n	Simple_repeat	1	54	(0)	3492191
28	19.7	3.2	4.1	chr6	123803758	123803851	(47002128)	+	(GAGCGGC)n	Simple_repeat	1	97	(0)	3492192
17	4.0	3.9	0.0	chr6	123804005	123804030	(47001949)	+	(GCC)n	Simple_repeat	1	27	(0)	3492193
3701	18.9	5.8	7.9	chr6	124312192	124313094	(46492885)	C	MER21A	LTR/ERVL	(48)	883	1	3492843
15314	12.9	1.6	0.7	chr6	125151313	125153651	(45652328)	+	Tigger1	DNA/TcMar-Tigger	55	2416	(2)	3493929
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
481	6.2	0.0	0.0	chr6	125302382	125302445	(45503534)	+	MER72	LTR/ERV1	659	722	(0)	3494129
13	12.0	5.0	4.8	chr6	125749637	125749676	(45056303)	+	(AGCCGC)n	Simple_repeat	1	42	(0)	3494761
13	13.1	0.0	0.0	chr6	125790897	125790921	(45015058)	+	(CCT)n	Simple_repeat	1	25	(0)	3494827
12	16.1	0.0	3.3	chr6	125791095	125791124	(45014855)	+	(CGC)n	Simple_repeat	1	30	(0)	3494828
13	13.2	6.7	4.2	chr6	125956943	125956987	(44848992)	+	(GAGGCGC)n	Simple_repeat	1	48	(0)	3495078
2697	8.4	3.6	0.5	chr6	126505356	126505736	(44300243)	+	HERVK9-int	LTR/ERVK	1	393	(5628)	3495739
22337	10.6	1.5	0.4	chr6	126505773	126511668	(44294311)	+	L1PA8	LINE/L1	373	6337	(20)	3495740
647	27.8	13.0	4.8	chr6	126684986	126685378	(44120601)	C	L1MEc	LINE/L1	(1216)	1464	1035	3495912
62	17.2	0.0	2.4	chr6	126685379	126685528	(44120451)	+	(TTCCC)n	Simple_repeat	1	146	(0)	3495915
14023	11.8	4.5	3.0	chr6	126685529	126688565	(44117414)	+	L1PBa	LINE/L1	1094	4222	(2640)	3495916
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
13	16.3	2.8	2.7	chr6	129446488	129446500	(41359479)	+	GA-rich	Low_complexity	1	13	(0)	3499459
75	3.9	0.0	0.0	chr6	129446501	129446580	(41359399)	+	(AGGGG)n	Simple_repeat	1	80	(0)	3499460
13	16.3	2.8	2.7	chr6	129446581	129446602	(41359377)	+	GA-rich	Low_complexity	14	36	(0)	3499461
320	28.5	14.3	9.5	chr6	131459775	131459991	(39345988)	+	MIRc	SINE/MIR	32	251	(17)	3502375
53	0.0	0.0	0.0	chr6	131460317	131460361	(39345618)	+	(TC)n	Simple_repeat	1	45	(0)	3502376
27	2.9	2.9	0.0	chr6	131460362	131460396	(39345583)	+	(GT)n	Simple_repeat	1	36	(0)	3502377
4889	20.0	6.1	0.9	chr6	131918253	131919316	(38886663)	+	L1PA13	LINE/L1	17	1139	(5646)	3503105
14	17.6	2.5	2.4	chr6	131950864	131950903	(38855076)	+	(GCCGCA)n	Simple_repeat	1	41	(0)	3503156
13	16.8	0.0	5.4	chr6	131950933	131950969	(38855010)	+	(GCCCG)n	Simple_repeat	1	37	(0)	3503157
12	20.7	0.0	2.9	chr6	132401389	132401423	(38404556)	+	(AGC)n	Simple_repeat	1	35	(0)	3503794
12	15.3	6.4	4.0	chr6	132401470	132401516	(38404463)	+	G-rich	Low_complexity	1	50	(0)	3503795
26	6.1	0.0	0.0	chr6	132401606	132401639	(38404340)	+	(CGTCC)n	Simple_repeat	1	34	(0)	3503796
20	22.9	1.4	5.3	chr6	132401772	132401845	(38404134)	+	GA-rich	Low_complexity	1	75	(0)	3503797
4793	9.1	1.7	2.2	chr6	132533850	132534971	(38271008)	+	MER11A	LTR/ERVK	1	1266	(0)	3503944
3666	19.1	4.9	7.9	chr6	132717892	132718788	(38087191)	C	MER21A	LTR/ERVL	(28)	903	35	3504204
2289	11.5	0.3	0.6	chr6	133483671	133483698	(37322281)	C	AluSx1	SINE/Alu	(0)	312	285	3505294
45	0.0	0.0	0.0	chr6	133483699	133483739	(37322240)	+	(TTA)n	Simple_repeat	1	41	(0)	3505295
2289	11.5	0.3	0.6	chr6	133483740	133484023	(37321956)	C	AluSx1	SINE/Alu	(28)	284	2	3505294
296	24.4	10.3	7.1	chr6	133952661	133952828	(36853151)	+	Charlie2a	DNA/hAT-Charlie	1472	1645	(1216)	3505929
304	13.6	5.2	6.8	chr6	134193443	134193501	(36612478)	C	7SLRNA	srpRNA	(242)	78	21	3506359
346	13.2	3.6	0.0	chr6	134193704	134193756	(36612223)	+	MER66C	LTR/ERV1	368	422	(133)	3506360
49	7.1	0.0	4.8	chr6	134193772	134193854	(36612125)	+	(AGGGG)n	Simple_repeat	1	83	(0)	3506361
1832	17.0	1.5	3.5	chr6	134193855	134194202	(36611777)	C	MER6A	DNA/TcMar-Tigger	(224)	381	41	3506358
666	32.0	3.0	1.3	chr6	134562546	134562776	(36243203)	+	L2c	LINE/L2	3146	3380	(7)	3507117
5613	7.2	4.2	2.6	chr6	135247562	135248328	(35557651)	+	LTR17	LTR/ERV1	1	780	(0)	3508200
16	0.0	0.0	0.0	chr6	135877359	135877375	(34928604)	+	(T)n	Simple_repeat	1	17	(0)	3509067
14	12.4	5.7	0.0	chr6	135877397	135877431	(34928548)	+	(TTCAGAT)n	Simple_repeat	1	37	(0)	3509068
645	30.7	8.4	6.9	chr6	135877657	135878135	(34927844)	C	LTR16C	LTR/ERVL	(2)	487	1	3509069
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
2475	15.1	10.6	3.1	chr6	137651223	137651742	(33154237)	+	LTR6A	LTR/ERV1	1	564	(0)	3511775
1559	24.3	6.6	2.4	chr6	137651743	137651911	(33154068)	+	L1ME3A	LINE/L1	5973	6161	(12)	3511774
226	27.9	9.0	2.4	chr6	137718671	137718795	(33087184)	C	L3b	LINE/CR1	(150)	5082	4949	3511865
2533	6.4	0.0	0.0	chr6	137718928	137719253	(33086726)	C	LTR17	LTR/ERV1	(454)	326	1	3511866
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
385	31.8	5.2	5.6	chr6	138107872	138108104	(32697875)	+	L2b	LINE/L2	3139	3370	(5)	3512467
38	15.6	4.1	2.9	chr6	138987868	138987965	(31818014)	+	(CGGCTG)n	Simple_repeat	1	102	(0)	3513898
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
1419	8.2	9.6	0.0	chr6	139911834	139912041	(30893938)	C	MER30	DNA/hAT-Charlie	(0)	230	1	3515395
1252	19.8	7.9	2.8	chr6	140898220	140898542	(29907437)	C	MER61A	LTR/ERV1	(0)	341	1	3516606
3002	19.4	2.0	5.1	chr6	141521370	141522255	(29283724)	+	L1MA4A	LINE/L1	5339	6164	(2)	3517368
2173	14.9	2.9	4.5	chr6	142377118	142377539	(28428440)	C	MER61C	LTR/ERV1	(0)	428	14	3518437
14	8.5	0.0	3.7	chr6	142946113	142946139	(27859840)	+	(GAGG)n	Simple_repeat	1	27	(0)	3519179
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
3752	14.7	5.0	3.2	chr6	143049117	143049999	(27755980)	C	MER52C	LTR/ERV1	(731)	1392	253	3519319
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
2270	9.8	0.7	0.3	chr6	144095894	144096180	(26709799)	C	AluYc	SINE/Alu	(11)	288	1	3520847
2797	14.0	2.5	0.0	chr6	144249997	144250432	(26555547)	C	MER83	LTR/ERV1	(1)	447	1	3521104
333	28.4	12.1	7.0	chr6	144250433	144250546	(26555433)	C	L2a	LINE/L2	(179)	3247	3125	3521103
199	32.9	13.4	0.0	chr6	144250620	144250780	(26555199)	+	L2c	LINE/L2	3038	3223	(164)	3521105
17	23.6	2.2	0.0	chr6	144327179	144327224	(26478755)	+	GA-rich	Low_complexity	1	47	(0)	3521245
10171	6.3	1.7	0.9	chr6	144469704	144471072	(26334907)	C	SVA_B	Retroposon/SVA	(2)	1381	1	3521471
25	8.2	0.0	0.0	chr6	144471073	144471111	(26334868)	+	(GGAGAG)n	Simple_repeat	1	39	(0)	3521472
12	8.6	0.0	6.9	chr6	144471112	144471140	(26334839)	+	(TCTTT)n	Simple_repeat	1	29	(0)	3521473
15	14.0	3.1	0.0	chr6	144471208	144471239	(26334740)	+	GA-rich	Low_complexity	1	33	(0)	3521474
18	18.9	4.2	0.0	chr6	145814784	145814831	(24991148)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3523214
223	27.2	15.6	2.6	chr6	145815054	145815170	(24990809)	C	MIR3	SINE/MIR	(60)	148	14	3523215
304	31.4	5.2	7.7	chr6	146410503	146410799	(24395180)	C	L2c	LINE/L2	(105)	3282	2994	3523996
13	32.8	0.0	0.0	chr6	147203730	147203779	(23602200)	+	(GCC)n	Simple_repeat	1	50	(0)	3525091
15	13.2	2.9	2.8	chr6	147508440	147508474	(23297505)	+	(GCG)n	Simple_repeat	1	36	(0)	3525501
12	24.0	2.6	0.0	chr6	147508629	147508667	(23297312)	+	(GCG)n	Simple_repeat	1	40	(0)	3525502
43	14.5	0.0	0.0	chr6	148343092	148343167	(22462812)	+	(CCGGAG)n	Simple_repeat	1	76	(0)	3526766
2318	11.3	0.7	0.0	chr6	148396197	148396506	(22409473)	+	AluSz	SINE/Alu	1	312	(0)	3526865
484	21.1	16.0	0.0	chr6	148396739	148396890	(22409089)	+	MIRb	SINE/MIR	20	200	(68)	3526866
272	27.7	8.5	3.0	chr6	148397029	148397162	(22408817)	C	L1MC5a	LINE/L1	(2)	2775	2634	3526867
14	14.4	1.8	8.9	chr6	148747132	148747186	(22058793)	+	G-rich	Low_complexity	1	56	(0)	3527384
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
16	32.6	0.0	0.0	chr6	149317603	149317663	(21488316)	+	G-rich	Low_complexity	1	61	(0)	3528246
56	30.4	1.3	2.6	chr6	149317784	149317804	(21488175)	+	(GCG)n	Simple_repeat	1	27	(203)	3528247
13	20.7	1.8	6.9	chr6	149317805	149317861	(21488118)	+	GA-rich	Low_complexity	1	58	(0)	3528248
56	30.4	1.3	2.6	chr6	149317862	149318010	(21487969)	+	(GCG)n	Simple_repeat	28	230	(0)	3528247
28	24.9	2.0	2.9	chr6	149566288	149566388	(21239591)	+	(CCCGC)n	Simple_repeat	1	100	(0)	3528682
11	26.6	5.6	2.7	chr6	150599796	150599812	(20206167)	+	G-rich	Low_complexity	1	29	(46)	3530476
15	14.9	0.0	0.0	chr6	150599813	150599842	(20206137)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3530477
11	26.6	5.6	2.7	chr6	150599843	150599866	(20206113)	+	G-rich	Low_complexity	30	75	(0)	3530476
29	3.2	0.0	0.0	chr6	150599879	150599910	(20206069)	+	(GAGCCC)n	Simple_repeat	1	32	(0)	3530478
2167	13.1	0.0	1.9	chr6	150743238	150743550	(20062429)	+	AluSz	SINE/Alu	1	307	(5)	3530668
2334	11.0	0.0	0.0	chr6	150744066	150744373	(20061606)	C	AluSc8	SINE/Alu	(3)	308	1	3530669
14	4.5	4.3	0.0	chr6	150757683	150757705	(20048274)	+	(TTC)n	Simple_repeat	1	24	(0)	3530696
5223	9.3	5.3	1.3	chr6	150757710	150758336	(20047643)	C	L1PA10	LINE/L1	(17)	6151	5491	3530697
21	24.1	3.2	0.0	chr6	150865917	150865979	(19940000)	+	(GCG)n	Simple_repeat	1	65	(0)	3530875
13	29.8	1.1	6.7	chr6	150866984	150867072	(19938907)	+	(TCCT)n	Simple_repeat	1	90	(0)	3530876
113	23.6	3.0	2.9	chr6	151171516	151171620	(19634359)	+	(TTTC)n	Simple_repeat	1	110	(0)	3531470
644	16.4	7.6	4.7	chr6	151171621	151171748	(19634231)	C	FLAM_A	SINE/Alu	(9)	133	2	3531471
113	23.6	3.0	2.9	chr6	151171749	151171917	(19634062)	+	(TTTC)n	Simple_repeat	3	169	(0)	3531472
54	0.0	3.6	0.0	chr6	151171918	151171973	(19634006)	+	(TCCCTTCCCC)n	Simple_repeat	1	58	(0)	3531473
47	8.3	0.0	0.0	chr6	151171982	151172046	(19633933)	+	(TTTC)n	Simple_repeat	1	65	(0)	3531474
643	17.8	0.0	5.1	chr6	151172047	151172164	(19633815)	C	FLAM_A	SINE/Alu	(29)	113	2	3531475
79	2.6	0.0	0.0	chr6	151172172	151172250	(19633729)	+	(TCTT)n	Simple_repeat	1	79	(0)	3531476
17	11.3	0.0	0.0	chr6	151325607	151325635	(19480344)	+	(GTGG)n	Simple_repeat	1	29	(0)	3531798
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
17	12.4	2.9	0.0	chr6	151390334	151390368	(19415611)	+	(TCCCCG)n	Simple_repeat	1	36	(0)	3531907
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
18	6.8	0.0	5.7	chr6	151390752	151390786	(19415193)	+	(CCCTC)n	Simple_repeat	1	35	(0)	3531911
15	20.1	0.0	0.0	chr6	151390815	151390866	(19415113)	+	(GCA)n	Simple_repeat	1	52	(0)	3531912
23	25.1	2.6	1.3	chr6	151391001	151391077	(19414902)	+	(CCTC)n	Simple_repeat	1	79	(0)	3531913
1548	14.3	1.7	3.7	chr6	152477817	152478061	(18327918)	C	AluJo	SINE/Alu	(67)	245	6	3533585
3965	26.0	12.2	0.8	chr6	152478062	152479377	(18326602)	C	L2	LINE/L2	(1300)	2119	649	3533584
18	30.4	0.0	2.9	chr6	153131242	153131310	(17674669)	+	GA-rich	Low_complexity	1	69	(0)	3534483
209	18.6	0.0	10.4	chr6	154156553	154156600	(16649379)	+	MIRc	SINE/MIR	213	255	(13)	3535879
13	18.2	3.5	6.8	chr6	154733522	154733578	(16072401)	+	G-rich	Low_complexity	1	59	(0)	3536959
1737	27.1	12.4	5.1	chr6	155112417	155113438	(15692541)	+	L2a	LINE/L2	2148	3270	(156)	3537660
299	36.2	0.9	2.4	chr6	155174136	155174347	(15631632)	+	MIR	SINE/MIR	4	212	(50)	3537769
11428	8.9	2.1	0.3	chr6	155858483	155860032	(14945947)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3538660
2067	13.0	6.9	2.0	chr6	155860034	155860378	(14945601)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	3538660
361	17.2	0.0	0.0	chr6	156593252	156593309	(14212670)	+	LTR83	LTR/ERVL	541	598	(182)	3539683
474	10.3	0.0	1.4	chr6	156593312	156593380	(14212599)	+	Tigger2b_Pri	DNA/TcMar-Tigger	2	69	(999)	3539684
2629	12.9	5.8	0.5	chr6	156593365	156593792	(14212187)	+	Tigger2	DNA/TcMar-Tigger	2267	2718	(0)	3539685
1671	22.1	8.6	2.0	chr6	157723856	157724302	(13081677)	C	MER21C	LTR/ERVL	(33)	905	427	3541351
475	11.8	0.0	0.0	chr6	157724329	157724396	(13081583)	+	LTR23	LTR/ERV1	12	79	(358)	3541352
3060	12.9	3.0	1.4	chr6	157724385	157724880	(13081099)	+	LTR24B	LTR/ERV1	65	568	(8)	3541353
11	20.2	2.9	0.0	chr6	157774111	157774144	(13031835)	+	(AGAGGC)n	Simple_repeat	1	35	(0)	3541445
40	1.8	1.6	6.2	chr6	157774218	157774280	(13031699)	+	(GGAGTGGA)n	Simple_repeat	1	64	(0)	3541446
35	14.0	6.7	2.1	chr6	157823035	157823124	(12982855)	+	(CGG)n	Simple_repeat	1	96	(0)	3541541
12	13.7	6.8	4.3	chr6	157823095	157823138	(12982841)	+	(GGCCGAG)n	Simple_repeat	1	47	(0)	3541542
14	21.6	4.7	0.0	chr6	157823308	157823350	(12982629)	+	(GCC)n	Simple_repeat	1	45	(0)	3541543
17	9.5	8.8	0.0	chr6	158232595	158232634	(12573345)	+	(GT)n	Simple_repeat	1	43	(0)	3542199
15	15.5	0.0	9.6	chr6	158818193	158818244	(11987735)	+	(CGCC)n	Simple_repeat	1	52	(0)	3543164
17	7.3	0.0	3.2	chr6	158818324	158818354	(11987625)	+	(GGGCC)n	Simple_repeat	1	31	(0)	3543165
11	27.7	0.0	0.0	chr6	158818711	158818749	(11987230)	+	G-rich	Low_complexity	1	39	(0)	3543166
13	15.7	0.0	7.3	chr6	158818816	158818856	(11987123)	+	G-rich	Low_complexity	1	41	(0)	3543167
15	12.4	5.7	0.0	chr6	158869856	158869890	(11936089)	+	G-rich	Low_complexity	1	37	(0)	3543275
1030	21.9	6.0	4.4	chr6	158943301	158943644	(11862335)	C	L1MC4	LINE/L1	(1)	8041	7692	3543424
98	18.9	1.4	1.4	chr6	158943662	158943869	(11862110)	+	(TTCCC)n	Simple_repeat	1	211	(0)	3543425
869	15.2	0.0	0.0	chr6	158943873	158943990	(11861989)	C	AluJr	SINE/Alu	(194)	118	1	3543426
14	5.2	8.9	6.1	chr6	159692948	159692992	(11112987)	+	(GCGTCCCC)n	Simple_repeat	1	49	(0)	3544445
16	27.2	1.9	0.0	chr6	159693167	159693219	(11112760)	+	(TGC)n	Simple_repeat	1	54	(0)	3544446
33	0.0	0.0	0.0	chr6	159727375	159727405	(11078574)	+	(GGCGGGA)n	Simple_repeat	1	31	(0)	3544510
22	22.7	3.4	4.3	chr6	159727409	159727497	(11078482)	+	(GGCGC)n	Simple_repeat	1	92	(0)	3544511
15	15.6	2.8	0.0	chr6	159969015	159969050	(10836929)	+	G-rich	Low_complexity	1	37	(0)	3544915
14	24.5	2.0	2.0	chr6	159969049	159969098	(10836881)	+	(GCTGTC)n	Simple_repeat	1	51	(0)	3544916
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
25	24.0	1.0	6.0	chr6	160991941	160991956	(9814023)	+	(GCC)n	Simple_repeat	1	25	(75)	3546055
12	18.8	2.6	2.6	chr6	160991957	160991994	(9813985)	+	(TCCCGCC)n	Simple_repeat	1	39	(0)	3546056
25	24.0	1.0	6.0	chr6	160991995	160992039	(9813940)	+	(GCC)n	Simple_repeat	26	100	(0)	3546055
840	15.4	6.9	0.7	chr6	161279626	161279775	(9526204)	+	MER5A1	DNA/hAT-Charlie	6	165	(1)	3546439
299	33.3	2.9	0.8	chr6	161279792	161279924	(9526055)	C	MIRc	SINE/MIR	(119)	149	14	3546440
714	10.4	1.0	0.0	chr6	161329709	161329804	(9476175)	+	MER4A	LTR/ERV1	568	664	(0)	3546516
3858	16.2	13.5	8.2	chr6	161329808	161330851	(9475128)	+	MER4-int	LTR/ERV1	1	2010	(3936)	3546516
1075	25.6	7.8	2.1	chr6	161479827	161480198	(9325781)	+	MLT1I	LTR/ERVL-MaLR	17	411	(0)	3546746
12	22.1	0.0	0.0	chr6	161748944	161748975	(9057004)	+	A-rich	Low_complexity	1	32	(0)	3547162
224	35.4	0.0	0.0	chr6	161749206	161749270	(9056709)	+	L2c	LINE/L2	3267	3331	(56)	3547163
261	20.2	6.6	5.0	chr6	161912409	161912537	(8893442)	+	MLT1H	LTR/ERVL-MaLR	104	240	(309)	3547413
251	31.1	6.7	10.0	chr6	161912659	161912894	(8893085)	+	MLT1H	LTR/ERVL-MaLR	311	536	(43)	3547413
15	13.2	2.9	2.8	chr6	162727299	162727333	(8078646)	+	(GGC)n	Simple_repeat	1	36	(0)	3548581
1001	30.3	8.9	7.2	chr6	162823899	162824606	(7981373)	C	L1M6	LINE/L1	(5769)	727	7	3548703
503	24.9	9.4	2.7	chr6	163663090	163663308	(7142671)	+	MIR	SINE/MIR	14	248	(14)	3549767
239	33.3	4.8	4.3	chr6	163663383	163663570	(7142409)	C	L2b	LINE/L2	(220)	3167	2979	3549768
1753	28.7	6.2	3.1	chr6	164616879	164617144	(6188835)	C	L1ME1	LINE/L1	(1593)	4553	4273	3550981
75	6.0	0.0	0.0	chr6	164617152	164617240	(6188739)	+	(TCCCC)n	Simple_repeat	1	89	(0)	3550983
374	14.1	13.5	0.0	chr6	164617269	164617332	(6188647)	C	AluJo	SINE/Alu	(199)	113	40	3550984
15	4.8	0.0	0.0	chr6	165309246	165309267	(5496712)	+	(CCT)n	Simple_repeat	1	22	(0)	3551810
1121	21.8	10.2	3.7	chr6	165309814	165310113	(5495866)	+	MER2	DNA/TcMar-Tigger	1	322	(23)	3551811
29	32.5	0.7	3.5	chr6	165662232	165662373	(5143606)	+	(GCC)n	Simple_repeat	1	143	(0)	3552225
12	14.9	2.3	6.8	chr6	165662636	165662678	(5143301)	+	(GCCCGG)n	Simple_repeat	1	44	(0)	3552226
12	13.9	0.0	0.0	chr6	165663204	165663227	(5142752)	+	(GGC)n	Simple_repeat	1	24	(0)	3552227
19	12.2	4.2	4.0	chr6	165663262	165663309	(5142670)	+	(CGC)n	Simple_repeat	1	50	(0)	3552228
36	4.9	0.0	0.0	chr6	166168161	166168203	(4637776)	+	(CGCCCCAGCC)n	Simple_repeat	1	43	(0)	3552880
1901	13.7	0.0	7.2	chr6	166252936	166253270	(4552709)	+	AluJb	SINE/Alu	2	312	(0)	3553001
2639	6.1	0.0	0.0	chr6	166533941	166534250	(4271729)	+	AluYk4	SINE/Alu	1	310	(1)	3553372
1184	14.2	0.5	12.1	chr6	166534251	166534349	(4271630)	+	AluJo	SINE/Alu	128	212	(100)	3553371
194	19.5	2.4	0.0	chr6	166561647	166561687	(4244292)	+	Tigger19b	DNA/TcMar-Tigger	60	101	(449)	3553396
465	5.6	0.0	0.0	chr6	166561717	166561770	(4244209)	C	MER30	DNA/hAT-Charlie	(0)	230	177	3553397
22473	6.3	0.7	0.9	chr6	166884812	166890997	(3914982)	+	L1PA5	LINE/L1	4	6153	(1)	3553745
4106	6.6	1.9	0.8	chr6	166891080	166891601	(3914378)	+	LTR17	LTR/ERV1	253	780	(0)	3553746
268	28.8	6.6	0.6	chr6	166998202	166998372	(3807607)	+	MER4C	LTR/ERV1	283	464	(1)	3553892
15	20.1	3.6	3.5	chr6	166999124	166999178	(3806801)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3553893
12	11.6	3.3	3.2	chr6	167130787	167130816	(3675163)	+	A-rich	Low_complexity	1	31	(0)	3554070
154	27.5	8.8	2.7	chr6	167507810	167508995	(3296984)	+	(TCCCTT)n	Simple_repeat	1	1291	(0)	3554493
18	7.0	0.0	3.1	chr6	168363226	168363257	(2442722)	+	(TATC)n	Simple_repeat	1	32	(0)	3555423
70	32.9	0.8	1.2	chr6	168363274	168363528	(2442451)	+	GA-rich	Low_complexity	1	257	(0)	3555424
11	18.7	4.3	4.2	chr6	169724154	169724199	(1081780)	+	G-rich	Low_complexity	1	48	(0)	3556770
76	14.8	2.7	4.7	chr6	170057611	170057795	(748184)	+	(CCCTCC)n	Simple_repeat	1	190	(0)	3557104
26	14.9	9.5	1.1	chr7	171467	171550	(159174423)	+	(GGCTCCC)n	Simple_repeat	1	92	(0)	3558038
201	33.1	9.5	1.6	chr7	252742	252867	(159093106)	C	MIR3	SINE/MIR	(87)	143	7	3558107
244	29.1	2.3	2.3	chr7	413930	414017	(158931956)	+	MIR3	SINE/MIR	59	146	(62)	3558308
230	15.7	2.4	4.2	chr7	414074	414608	(158931365)	+	(CCT)n	Simple_repeat	1	548	(0)	3558309
13	11.1	3.2	3.1	chr7	712293	712323	(158633650)	+	(GCCCC)n	Simple_repeat	1	32	(0)	3558779
18	16.6	2.0	3.9	chr7	712420	712470	(158633503)	+	G-rich	Low_complexity	1	52	(0)	3558780
2532	5.6	0.3	0.3	chr7	1166689	1166993	(158178980)	+	AluY	SINE/Alu	1	305	(6)	3559412
233	26.3	0.0	0.0	chr7	1167067	1167123	(158178850)	C	MIR	SINE/MIR	(107)	155	99	3559413
228	12.1	0.0	0.0	chr7	1167167	1167199	(158178774)	C	Alu	SINE/Alu	(100)	33	1	3559414
228	12.1	0.0	0.0	chr7	1167216	1167248	(158178725)	C	Alu	SINE/Alu	(100)	33	1	3559415
2014	12.2	1.4	0.0	chr7	1167324	1167630	(158178343)	C	AluSz6	SINE/Alu	(0)	312	1	3559416
256	31.4	0.0	3.4	chr7	1297272	1297360	(158048613)	C	Plat_L3	LINE/CR1	(228)	3358	3273	3559642
234	29.5	19.0	4.5	chr7	1358034	1358189	(157987784)	C	MIRb	SINE/MIR	(55)	213	30	3559758
19	6.5	0.0	5.6	chr7	1669857	1669892	(157676081)	+	(CCCA)n	Simple_repeat	1	36	(0)	3560287
43	19.6	2.0	1.0	chr7	1670094	1670194	(157675779)	+	GA-rich	Low_complexity	1	103	(0)	3560288
19	30.8	4.3	2.5	chr7	1929146	1929260	(157416713)	+	(CTCCCTT)n	Simple_repeat	1	120	(0)	3560634
17	15.9	8.2	0.0	chr7	2403446	2403494	(156942479)	+	G-rich	Low_complexity	1	53	(0)	3561339
3739	10.3	5.9	2.5	chr7	3578097	3579088	(155766885)	C	MER11A	LTR/ERVK	(0)	1266	1	3563509
593	28.9	1.3	0.0	chr7	3922285	3922436	(155423537)	+	MER63A	DNA/hAT-Blackjack	5	158	(52)	3564016
305	32.2	6.1	5.2	chr7	3922556	3923177	(155422796)	C	L1MEj	LINE/L1	(4806)	1690	937	3564017
1112	22.2	10.4	2.0	chr7	3955193	3955558	(155390415)	C	MLT1E2	LTR/ERVL-MaLR	(201)	453	4	3564065
256	30.9	6.2	9.1	chr7	3995103	3995301	(155350672)	+	L2b	LINE/L2	2914	3106	(269)	3564111
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
1715	8.6	0.4	3.7	chr7	4262019	4262291	(155083682)	C	AluSx1	SINE/Alu	(0)	312	47	3564479
2695	17.4	2.4	0.7	chr7	4392719	4393257	(154952716)	+	L1MB3	LINE/L1	5636	6183	(0)	3564724
188	21.9	0.0	0.0	chr7	5294794	5294834	(154051139)	C	MER5A	DNA/hAT-Charlie	(120)	69	29	3566716
15	23.5	0.0	6.5	chr7	5555179	5555240	(153790733)	+	(CCCGC)n	Simple_repeat	1	62	(0)	3567325
13	23.4	1.6	6.3	chr7	5555381	5555442	(153790531)	+	(CCCCGA)n	Simple_repeat	1	63	(0)	3567326
185	36.2	3.2	0.0	chr7	5555490	5555576	(153790397)	C	MIRc	SINE/MIR	(116)	152	59	3567315
16	25.8	1.3	5.2	chr7	5781370	5781445	(153564528)	+	(CCCTCGG)n	Simple_repeat	1	77	(0)	3567791
12	25.6	0.0	0.0	chr7	6105466	6105502	(153240471)	+	(CCGCCCG)n	Simple_repeat	1	37	(0)	3568623
38	24.9	4.2	7.0	chr7	6272188	6272447	(153073526)	+	(CCCCGGC)n	Simple_repeat	1	271	(0)	3568920
2263	6.5	1.8	0.0	chr7	6347928	6348205	(152997768)	C	AluSp	SINE/Alu	(30)	283	1	3569140
708	12.8	1.6	9.4	chr7	6348206	6348231	(152997742)	+	AluJb	SINE/Alu	112	126	(176)	3569138
233	22.5	8.5	6.6	chr7	6348316	6348418	(152997555)	+	MIRc	SINE/MIR	57	169	(99)	3569141
13	7.6	8.5	5.9	chr7	6348517	6348563	(152997410)	+	G-rich	Low_complexity	1	51	(0)	3569142
12	18.4	5.4	0.0	chr7	6348780	6348816	(152997157)	+	(GCCGC)n	Simple_repeat	1	39	(0)	3569143
203	32.7	4.5	7.0	chr7	6435800	6435914	(152910059)	+	MIR3	SINE/MIR	65	176	(32)	3569357
2010	10.3	2.4	3.1	chr7	6537262	6537370	(152808603)	+	AluSz	SINE/Alu	1	109	(203)	3569606
179	0.0	3.4	0.0	chr7	6577112	6577287	(152768686)	+	(ATAAA)n	Simple_repeat	1	182	(0)	3569724
2199	9.9	0.0	0.3	chr7	6663248	6663530	(152682443)	C	AluSx	SINE/Alu	(22)	290	9	3569906
584	19.4	0.0	0.0	chr7	6664704	6664796	(152681177)	C	AluJr	SINE/Alu	(219)	93	1	3569907
5925	7.7	13.4	6.3	chr7	6998728	6999807	(152346166)	+	MER11A	LTR/ERVK	1	1266	(0)	3570510
224	26.8	14.2	3.0	chr7	6999820	6999919	(152346054)	+	L2b	LINE/L2	3236	3348	(39)	3570508
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
17	22.7	2.2	0.0	chr7	7969361	7969406	(151376567)	+	(CCT)n	Simple_repeat	1	47	(0)	3571875
23	24.4	3.8	1.2	chr7	7970357	7970436	(151375537)	+	(TCCCTC)n	Simple_repeat	1	83	(0)	3571877
613	24.9	10.1	15.3	chr7	11069019	11069430	(148276543)	C	MER76	LTR/ERVL	(28)	663	276	3575726
369	21.4	2.0	2.0	chr7	11069479	11069578	(148276395)	C	L1M5	LINE/L1	(2315)	3831	3732	3575722
26	0.0	0.0	0.0	chr7	11069600	11069624	(148276349)	+	(TCCC)n	Simple_repeat	1	25	(0)	3575727
30	19.5	0.0	0.0	chr7	11069630	11069690	(148276283)	+	(CCCTC)n	Simple_repeat	1	61	(0)	3575728
29	12.2	6.5	6.1	chr7	11069691	11069718	(148276255)	+	(TCCT)n	Simple_repeat	6	94	(0)	3575729
181	27.2	2.1	8.7	chr7	11069736	11069838	(148276135)	C	AluYj4	SINE/Alu	(214)	97	2	3575730
764	23.8	8.6	1.7	chr7	11069849	11070117	(148275856)	C	L1M5	LINE/L1	(2457)	3689	3409	3575722
2521	14.7	7.5	3.0	chr7	12074923	12075419	(147270554)	+	LTR10A	LTR/ERV1	25	545	(64)	3576964
3108	16.1	11.8	1.0	chr7	14005271	14005897	(145340076)	+	MER39	LTR/ERV1	4	707	(0)	3579475
14	18.3	3.6	5.3	chr7	16753584	16753638	(142592335)	+	(CCCTCGC)n	Simple_repeat	1	57	(0)	3582984
7976	2.5	1.7	33.2	chr7	16789066	16791103	(142554870)	C	SVA_D	Retroposon/SVA	(0)	1386	1	3583034
4992	12.7	3.1	0.9	chr7	16852967	16853729	(142492244)	+	LTR17	LTR/ERV1	1	780	(0)	3583117
2142	11.6	3.0	0.0	chr7	16880167	16880458	(142465515)	C	AluSq2	SINE/Alu	(10)	303	3	3583160
314	27.6	6.6	10.6	chr7	19256765	19256906	(140089067)	C	AmnSINE2	SINE/tRNA-Deu	(17)	341	206	3586312
618	29.0	9.2	9.0	chr7	19295898	19296374	(140049599)	+	LTR81B	LTR/Gypsy	2	479	(914)	3586357
15	21.3	4.8	3.0	chr7	20798059	20798121	(138547852)	+	(GGCGCGGC)n	Simple_repeat	1	66	(0)	3588273
18	16.4	0.0	4.4	chr7	20798115	20798159	(138547814)	+	(GCCCC)n	Simple_repeat	1	45	(0)	3588274
13	13.0	5.6	2.6	chr7	20798416	20798451	(138547522)	+	(CTC)n	Simple_repeat	1	38	(0)	3588275
11	23.7	8.5	0.0	chr7	20798600	20798658	(138547315)	+	G-rich	Low_complexity	1	64	(0)	3588276
16	22.8	6.6	0.0	chr7	21428284	21428344	(137917629)	+	(CTCC)n	Simple_repeat	1	65	(0)	3589266
15	12.2	0.0	0.0	chr7	21428680	21428720	(137917253)	+	(AGG)n	Simple_repeat	1	41	(0)	3589267
11382	8.6	6.5	3.3	chr7	22451215	22452035	(136893938)	C	L1MA2	LINE/L1	(1767)	4379	3504	3590685
254	25.0	12.8	4.7	chr7	22452038	22452209	(136893764)	C	LTR50	LTR/ERVL	(39)	756	569	3590687
433	23.2	5.9	14.8	chr7	22452349	22452571	(136893402)	C	LTR50	LTR/ERVL	(593)	202	1	3590687
31	10.1	2.9	4.2	chr7	24573277	24573297	(134772676)	+	(GCG)n	Simple_repeat	1	20	(0)	3594106
38	0.0	0.0	0.0	chr7	24573298	24573332	(134772641)	+	(GGA)n	Simple_repeat	1	35	(0)	3594107
31	10.1	2.9	4.2	chr7	24573333	24573380	(134772593)	+	(GCG)n	Simple_repeat	3	50	(0)	3594108
16	10.0	4.0	7.7	chr7	24573401	24573450	(134772523)	+	G-rich	Low_complexity	1	52	(0)	3594109
25	20.8	1.3	5.0	chr7	24573501	24573579	(134772394)	+	(CGG)n	Simple_repeat	1	80	(0)	3594110
1789	19.0	4.0	0.9	chr7	24895192	24895526	(134450447)	+	Tigger3a	DNA/TcMar-Tigger	2	347	(1)	3594543
11715	8.5	2.2	0.6	chr7	25110041	25110881	(134235092)	+	THE1B-int	LTR/ERVL-MaLR	1	852	(728)	3594939
240	28.6	1.1	1.1	chr7	25540609	25540700	(133805273)	+	MIR3	SINE/MIR	58	149	(59)	3595590
41	0.0	0.0	0.0	chr7	25540748	25540782	(133805191)	+	(TG)n	Simple_repeat	1	35	(0)	3595591
16	5.3	0.0	0.0	chr7	25895796	25895815	(133450158)	+	(GA)n	Simple_repeat	1	20	(0)	3596087
457	20.0	10.2	2.6	chr7	26291508	26291661	(133054312)	C	L1ME2z	LINE/L1	(4)	6440	6274	3596788
16	4.0	0.0	6.7	chr7	26291981	26292010	(133053963)	+	(CGC)n	Simple_repeat	1	30	(0)	3596789
13	22.8	0.0	0.0	chr7	26292040	26292075	(133053898)	+	(GCCCG)n	Simple_repeat	1	36	(0)	3596790
330	29.6	18.1	3.6	chr7	26357464	26358077	(132987896)	C	L2b	LINE/L2	(499)	2920	2198	3596929
55	0.0	0.0	0.0	chr7	26377019	26377065	(132968908)	+	(TG)n	Simple_repeat	1	47	(0)	3596951
540	29.9	3.3	0.0	chr7	26397441	26397614	(132948359)	C	MLT1L	LTR/ERVL-MaLR	(316)	294	115	3596981
188	30.1	18.9	3.3	chr7	26397780	26397961	(132948012)	+	MIRb	SINE/MIR	38	254	(14)	3596982
18	28.9	2.2	3.3	chr7	27130798	27130886	(132215087)	+	(CCCCT)n	Simple_repeat	1	91	(0)	3598046
13	14.0	0.0	5.7	chr7	27130912	27130946	(132215027)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3598047
14	13.4	4.3	6.1	chr7	27169773	27169819	(132176154)	+	G-rich	Low_complexity	1	49	(0)	3598077
14	24.9	2.0	8.7	chr7	27169977	27170077	(132175896)	+	(GCCCCC)n	Simple_repeat	1	103	(0)	3598078
16	27.4	2.1	0.0	chr7	27662892	27662939	(131683034)	+	(GC)n	Simple_repeat	1	49	(0)	3598812
47	29.5	1.4	4.4	chr7	28180622	28180844	(131165129)	+	G-rich	Low_complexity	1	226	(0)	3599624
1178	22.9	3.8	4.1	chr7	28440946	28441286	(130904687)	+	MER121	DNA/hAT?	53	392	(9)	3600069
548	27.0	2.8	0.0	chr7	28441396	28441532	(130904441)	+	MIRc	SINE/MIR	70	210	(58)	3600070
13	24.6	5.1	1.6	chr7	29685300	29685358	(129660615)	+	(GGCGCCC)n	Simple_repeat	1	62	(0)	3601964
13	24.3	4.9	5.8	chr7	29685532	29685613	(129660360)	+	(GCC)n	Simple_repeat	1	86	(0)	3601965
19	22.5	2.4	6.0	chr7	29989645	29989726	(129356247)	+	G-rich	Low_complexity	1	84	(0)	3602440
12	18.5	0.0	9.6	chr7	30028708	30028759	(129317214)	+	G-rich	Low_complexity	1	52	(0)	3602520
12	12.6	0.0	3.6	chr7	30028809	30028836	(129317137)	+	(GGCCG)n	Simple_repeat	1	28	(0)	3602521
12	12.7	8.5	3.9	chr7	30284482	30284528	(129061445)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	3602921
12	32.3	2.4	3.6	chr7	30284934	30285015	(129060958)	+	(GGC)n	Simple_repeat	1	84	(0)	3602922
942	16.9	0.6	0.6	chr7	30478205	30478371	(128867602)	C	MER5B	DNA/hAT-Charlie	(11)	167	1	3603186
14	10.4	3.0	2.9	chr7	32891346	32891378	(126454595)	+	(GCGCCC)n	Simple_repeat	1	34	(0)	3606929
43	25.8	1.5	6.8	chr7	32891819	32892022	(126453951)	+	(CCGC)n	Simple_repeat	1	207	(0)	3606930
14	21.7	4.0	1.9	chr7	32942604	32942653	(126403320)	+	(GCCGCG)n	Simple_repeat	1	52	(0)	3607043
12	16.8	0.0	10.2	chr7	32943209	32943257	(126402716)	+	G-rich	Low_complexity	1	49	(0)	3607044
16	0.0	0.0	0.0	chr7	32956987	32957003	(126388970)	+	(A)n	Simple_repeat	1	17	(0)	3607083
15	23.3	0.0	0.0	chr7	32957415	32957454	(126388519)	+	(GCGG)n	Simple_repeat	1	40	(0)	3607084
14	22.9	0.0	6.9	chr7	32957516	32957573	(126388400)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3607085
20	27.2	6.9	0.0	chr7	33109240	33109340	(126236633)	+	(GCTGCC)n	Simple_repeat	1	108	(0)	3607377
26	0.0	0.0	0.0	chr7	33109418	33109442	(126236531)	+	(CGG)n	Simple_repeat	1	25	(0)	3607378
344	13.1	12.8	0.0	chr7	33109717	33109777	(126236196)	C	Ricksha_0	DNA/MULE-MuDR	(251)	1482	1413	3607379
1263	11.2	0.0	0.0	chr7	33109782	33109951	(126236022)	+	AluSx1	SINE/Alu	131	300	(12)	3607380
4704	9.3	3.3	1.5	chr7	36465539	36466513	(122879460)	+	MER11A	LTR/ERVK	29	1266	(0)	3612353
5897	18.7	5.9	6.9	chr7	36587301	36588397	(122757576)	C	Charlie1a	DNA/hAT-Charlie	(373)	1082	1	3612533
13	14.5	7.9	0.0	chr7	37448387	37448424	(121897549)	+	(CTCCCA)n	Simple_repeat	1	41	(0)	3613761
14	20.1	0.0	0.0	chr7	37448591	37448624	(121897349)	+	(CCCGGC)n	Simple_repeat	1	34	(0)	3613762
751	9.4	0.0	0.0	chr7	37732133	37732228	(121613745)	C	AluSx3	SINE/Alu	(1)	310	215	3614184
607	6.3	0.0	0.0	chr7	37732240	37732318	(121613655)	+	MADE1	DNA/TcMar-Mariner	1	79	(1)	3614185
12	24.0	0.0	0.0	chr7	38631597	38631631	(120714342)	+	A-rich	Low_complexity	1	35	(0)	3615416
405	29.6	16.0	0.6	chr7	39357308	39357487	(119988486)	C	MIR	SINE/MIR	(19)	243	31	3616406
1453	20.5	6.1	8.1	chr7	39357948	39358451	(119987522)	+	L1MC5	LINE/L1	8812	9304	(0)	3616407
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
19	25.4	4.0	1.3	chr7	42237877	42237952	(117108021)	+	G-rich	Low_complexity	1	79	(0)	3620931
25	11.9	1.6	6.3	chr7	42237942	42238003	(117107970)	+	(CGC)n	Simple_repeat	1	63	(0)	3620932
44	2.3	0.0	0.0	chr7	42238004	42238047	(117107926)	+	(CCT)n	Simple_repeat	1	44	(0)	3620933
21	21.0	1.6	3.1	chr7	42238048	42238057	(117107916)	+	(CCCCGC)n	Simple_repeat	6	15	(0)	3620934
9549	17.8	7.2	1.6	chr7	42882565	42884219	(116461754)	C	MER52A	LTR/ERV1	(0)	1755	1	3621799
12	29.2	0.0	3.7	chr7	42911707	42911760	(116434213)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3621832
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
2369	10.1	0.0	0.3	chr7	43057629	43057936	(116288037)	C	AluSq	SINE/Alu	(6)	307	1	3622044
16	13.7	0.0	0.0	chr7	43058024	43058048	(116287925)	+	(GT)n	Simple_repeat	1	25	(0)	3622045
3401	11.2	3.2	1.1	chr7	43669214	43669761	(115676212)	+	LTR9B	LTR/ERV1	1	560	(84)	3622965
16	9.8	0.0	0.0	chr7	43669762	43669783	(115676190)	+	(A)n	Simple_repeat	1	22	(0)	3622966
1318	25.8	11.6	2.8	chr7	44085378	44085681	(115260292)	+	LTR8B	LTR/ERV1	331	756	(64)	3623782
467	21.6	4.1	6.7	chr7	44086214	44086301	(115259672)	C	MER5B	DNA/hAT-Charlie	(33)	145	57	3623784
1709	16.2	4.2	2.3	chr7	44086302	44086603	(115259370)	C	AluJr	SINE/Alu	(4)	308	1	3623785
20	20.5	1.4	5.6	chr7	44276091	44276160	(115069813)	+	G-rich	Low_complexity	1	71	(0)	3624015
12	21.9	3.9	3.8	chr7	44796964	44797014	(114548959)	+	(GCG)n	Simple_repeat	1	53	(0)	3624883
28	6.4	3.9	1.9	chr7	44999656	44999706	(114346267)	+	(CCCCGTC)n	Simple_repeat	1	53	(0)	3625319
17	15.5	2.8	0.0	chr7	45073624	45073659	(114272314)	+	GA-rich	Low_complexity	1	37	(0)	3625454
7330	18.3	12.1	3.6	chr7	45399117	45399698	(113946275)	+	MER52A	LTR/ERV1	1	707	(1048)	3625884
187	23.1	1.9	3.7	chr7	45681041	45681094	(113664879)	C	MIRc	SINE/MIR	(120)	148	96	3626218
3904	13.9	1.4	5.7	chr7	47040590	47041330	(112304643)	+	MER50	LTR/ERV1	3	711	(23)	3628030
27	0.0	0.0	0.0	chr7	48028480	48028508	(111317465)	+	(A)n	Simple_repeat	1	29	(0)	3629382
954	32.6	7.3	4.1	chr7	49206969	49207953	(110138020)	C	L2a	LINE/L2	(0)	3426	2403	3630836
86	29.3	4.1	3.7	chr7	49770694	49771111	(109574862)	+	A-rich	Low_complexity	1	435	(0)	3631552
3776	15.0	2.5	5.6	chr7	50490714	50491531	(108854442)	+	MER4-int	LTR/ERV1	5381	6598	(0)	3632435
3014	12.4	0.9	0.4	chr7	50491537	50491999	(108853974)	+	MER4C	LTR/ERV1	1	465	(0)	3632435
4755	17.3	3.6	3.6	chr7	50764891	50765974	(108579999)	+	L1MA4	LINE/L1	5208	6295	(5)	3632756
22	10.0	2.1	4.2	chr7	50766403	50766449	(108579524)	+	(CTTTT)n	Simple_repeat	1	48	(0)	3632757
2357	12.1	4.1	1.7	chr7	50772950	50773302	(108572671)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	3632760
227	18.2	0.0	10.8	chr7	50773303	50773334	(108572639)	+	L1M4	LINE/L1	5452	5482	(698)	3632759
88	6.5	9.9	1.5	chr7	50773335	50773533	(108572440)	+	G-rich	Low_complexity	1	215	(0)	3632761
1639	16.8	3.1	0.3	chr7	50773534	50773844	(108572129)	+	L1M4	LINE/L1	5480	5799	(381)	3632759
29	18.0	1.3	4.0	chr7	51316409	51316483	(108029490)	+	(CAC)n	Simple_repeat	1	76	(0)	3633470
17	18.3	1.8	5.4	chr7	51316813	51316867	(108029106)	+	G-rich	Low_complexity	1	56	(0)	3633471
18	16.6	4.4	5.6	chr7	51316884	51316951	(108029022)	+	(CCCCGC)n	Simple_repeat	1	71	(0)	3633472
254	14.8	0.0	10.3	chr7	54806465	54806532	(104539441)	+	MER115	DNA/hAT-Tip100	573	633	(60)	3637831
5739	10.9	1.1	1.0	chr7	54933085	54933175	(104412798)	+	L1MA3	LINE/L1	7464	7557	(167)	3637987
12	27.4	1.8	3.5	chr7	54933238	54933293	(104412680)	+	G-rich	Low_complexity	1	57	(0)	3637989
12	12.8	5.6	2.6	chr7	54933402	54933437	(104412536)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	3637990
30	17.0	2.0	7.0	chr7	55018905	55019002	(104326971)	+	(CTC)n	Simple_repeat	1	100	(0)	3638101
13	16.3	2.8	2.7	chr7	55365947	55365982	(103979991)	+	(CGG)n	Simple_repeat	1	37	(0)	3638526
285	26.0	7.6	0.0	chr7	55952299	55952371	(103393602)	C	MIRb	SINE/MIR	(79)	189	111	3639568
48	7.5	1.4	1.3	chr7	56450030	56450103	(102895870)	+	(CCCTC)n	Simple_repeat	1	75	(0)	3640585
905	18.6	0.7	0.0	chr7	56450106	56450250	(102895723)	C	AluJb	SINE/Alu	(23)	289	144	3640586
2166	13.3	0.7	0.3	chr7	57180741	57181049	(102164924)	+	AluSx3	SINE/Alu	1	310	(1)	3641892
12	5.6	0.0	0.0	chr7	57181184	57181202	(102164771)	+	(CCT)n	Simple_repeat	1	19	(0)	3641893
14	0.0	0.0	0.0	chr7	57181286	57181303	(102164670)	+	(TCC)n	Simple_repeat	1	18	(0)	3641894
13	5.3	0.0	0.0	chr7	57181530	57181549	(102164424)	+	(TCC)n	Simple_repeat	1	20	(0)	3641895
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
935	21.7	16.2	5.4	chr7	65270874	65271278	(94074695)	C	MER92B	LTR/ERV1	(126)	510	54	3647586
17047	15.6	1.9	0.9	chr7	65403922	65406831	(93939142)	+	HUERS-P3-int	LTR/ERV1	1050	3990	(4929)	3647795
69	14.7	0.8	2.2	chr7	65873235	65873367	(93472606)	+	(GGC)n	Simple_repeat	1	134	(0)	3648679
1107	14.5	0.0	0.0	chr7	66592458	66592623	(92753350)	+	AluSx	SINE/Alu	146	311	(1)	3650350
1784	16.6	7.9	1.3	chr7	66865209	66865525	(92480448)	+	MSTD	LTR/ERVL-MaLR	1	340	(56)	3650995
203	12.6	2.3	6.0	chr7	66865532	66866001	(92479972)	+	(CCCTT)n	Simple_repeat	1	481	(0)	3650996
2383	7.7	0.3	0.0	chr7	67303089	67303387	(92042586)	+	AluSx1	SINE/Alu	1	300	(12)	3651929
31	2.2	4.0	3.9	chr7	69598310	69598359	(89747614)	+	(CGAG)n	Simple_repeat	1	52	(0)	3657061
12	21.7	0.0	2.9	chr7	69598809	69598843	(89747130)	+	(TCTCC)n	Simple_repeat	1	35	(0)	3657062
14	19.8	0.0	2.7	chr7	69598883	69598919	(89747054)	+	(TCC)n	Simple_repeat	1	37	(0)	3657063
37	0.0	0.0	0.0	chr7	69600054	69600087	(89745886)	+	(CTGT)n	Simple_repeat	1	34	(0)	3657067
41	2.5	0.0	0.0	chr7	69600409	69600448	(89745525)	+	(GT)n	Simple_repeat	1	40	(0)	3657068
56	10.3	0.0	1.1	chr7	70073011	70073098	(89272875)	+	(CTCCC)n	Simple_repeat	1	88	(0)	3657811
33	7.2	0.0	0.0	chr7	70486819	70486862	(88859111)	+	(GTG)n	Simple_repeat	1	44	(0)	3658369
89	1.2	1.1	0.0	chr7	70845639	70845725	(88500248)	+	(GGGGAGGGAG)n	Simple_repeat	1	88	(0)	3658937
1948	6.8	12.0	1.1	chr7	70845867	70846132	(88499841)	+	AluSp	SINE/Alu	1	299	(14)	3658938
14	21.7	0.0	8.1	chr7	73557165	73557226	(85788747)	+	G-rich	Low_complexity	1	62	(0)	3664903
21	16.8	3.0	5.8	chr7	73557632	73557698	(85788275)	+	(CGC)n	Simple_repeat	1	69	(0)	3664904
13	17.4	5.3	5.0	chr7	73557829	73557885	(85788088)	+	(CGAGGTG)n	Simple_repeat	1	60	(0)	3664905
20	7.9	4.8	2.3	chr7	73647799	73647840	(85698133)	+	(GGGCGGC)n	Simple_repeat	1	44	(0)	3665148
459	18.5	4.0	0.6	chr7	73648321	73649365	(85696608)	+	(CT)n	Simple_repeat	1	1087	(0)	3665149
1074	18.0	11.3	17.9	chr7	73667274	73667430	(85678543)	C	AluJb	SINE/Alu	(167)	135	1	3665205
252	22.4	4.9	0.0	chr7	73667437	73667494	(85678479)	C	MIR3	SINE/MIR	(39)	169	109	3665207
35	5.0	1.4	6.8	chr7	73667848	73667919	(85678054)	+	(CGGAG)n	Simple_repeat	1	73	(0)	3665208
2172	11.6	0.0	0.3	chr7	73810175	73810467	(85535506)	C	AluSz	SINE/Alu	(20)	292	1	3665527
12	14.7	3.3	0.0	chr7	73810924	73810953	(85535020)	+	G-rich	Low_complexity	1	31	(0)	3665528
13	28.4	3.9	0.0	chr7	73810996	73811047	(85534926)	+	(CCT)n	Simple_repeat	1	54	(0)	3665529
14	26.3	1.7	3.4	chr7	74084044	74084122	(85261851)	+	G-rich	Low_complexity	1	77	(0)	3666146
283	31.2	3.4	0.6	chr7	74084398	74084568	(85261405)	+	MIR3	SINE/MIR	19	196	(72)	3666147
1899	11.5	0.0	1.1	chr7	74201187	74201502	(85144471)	C	AluSq	SINE/Alu	(0)	313	9	3666455
4893	9.6	1.7	5.7	chr7	74201503	74201515	(85144458)	C	L1MA1	LINE/L1	(238)	6064	6059	3666454
2291	8.2	0.0	0.0	chr7	74201516	74201819	(85144154)	C	AluSq4	SINE/Alu	(7)	304	1	3666456
22	13.4	7.0	4.0	chr7	74453999	74454069	(84891904)	+	(CCTCG)n	Simple_repeat	1	76	(0)	3667134
14	18.7	2.2	4.3	chr7	74454098	74454143	(84891830)	+	(GGCCGG)n	Simple_repeat	1	47	(0)	3667135
22	23.2	0.0	0.0	chr7	75639245	75639290	(83706683)	+	G-rich	Low_complexity	1	46	(0)	3670120
2342	8.6	0.0	0.0	chr7	75661291	75661593	(83684380)	+	AluSx	SINE/Alu	1	303	(9)	3670179
2410	9.0	0.0	1.3	chr7	76180802	76181113	(83164860)	+	AluSc8	SINE/Alu	1	308	(3)	3671508
2555	7.7	0.0	0.0	chr7	76258434	76258743	(83087230)	+	AluSx3	SINE/Alu	2	311	(0)	3671727
4580	28.1	11.0	4.6	chr7	76715576	76716232	(82629741)	C	L1ME2	LINE/L1	(1547)	4772	4107	3672656
7161	6.9	14.9	2.2	chr7	76716233	76717333	(82628640)	C	MER11A	LTR/ERVK	(0)	1266	1	3672658
1598	17.5	6.8	0.0	chr7	78051885	78052158	(81293815)	C	AluJo	SINE/Alu	(13)	299	6	3674929
2148	14.4	7.0	0.2	chr7	78052165	78052562	(81293411)	+	MSTB1	LTR/ERVL-MaLR	6	432	(0)	3674930
18	13.5	0.0	0.0	chr7	79453600	79453632	(79892341)	+	(GGC)n	Simple_repeat	1	33	(0)	3676790
30	3.5	0.0	0.0	chr7	79453794	79453823	(79892150)	+	(GT)n	Simple_repeat	1	30	(0)	3676791
12	23.6	1.8	5.4	chr7	79453994	79454048	(79891925)	+	(GGAGCCG)n	Simple_repeat	1	56	(0)	3676792
31	0.0	0.0	0.0	chr7	80949253	80949279	(78396694)	+	(TG)n	Simple_repeat	1	27	(0)	3678848
17	11.7	5.4	0.0	chr7	80949282	80949320	(78396653)	+	(AGAGAC)n	Simple_repeat	1	41	(0)	3678849
5014	8.2	9.2	1.0	chr7	81182024	81182738	(78163235)	C	LTR17	LTR/ERV1	(0)	780	1	3679208
1812	7.9	1.6	0.0	chr7	81333592	81333831	(78012142)	+	SSU-rRNA_Hsa	rRNA	526	769	(1100)	3679394
6276	15.3	4.0	0.2	chr7	82081666	82082748	(77263225)	C	LTR28C	LTR/ERV1	(3)	1126	1	3680386
58	12.9	1.0	0.0	chr7	82185473	82185569	(77160404)	+	(GGGGGA)n	Simple_repeat	1	98	(0)	3680522
22	13.8	0.0	0.0	chr7	82443816	82443855	(76902118)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	3680896
41	17.6	0.0	0.0	chr7	82953664	82953740	(76392233)	+	GA-rich	Low_complexity	1	77	(0)	3681599
29	0.0	0.0	0.0	chr7	84203503	84203527	(75142446)	+	(TA)n	Simple_repeat	1	25	(0)	3683252
2102	14.5	0.3	0.0	chr7	84203528	84203830	(75142143)	C	AluSq2	SINE/Alu	(9)	304	1	3683253
2431	23.8	7.5	0.7	chr7	85560015	85560619	(73785354)	+	MLT1E1	LTR/ERVL-MaLR	5	654	(0)	3684942
3275	24.4	7.0	5.0	chr7	85748966	85750652	(73595321)	+	L1PA7	LINE/L1	644	2076	(5258)	3685163
1653	17.2	4.0	4.5	chr7	86206355	86206707	(73139266)	C	MER52-int	LTR/ERV1	(6316)	775	425	3685684
129	17.7	2.1	1.8	chr7	86206709	86206987	(73138986)	+	G-rich	Low_complexity	1	285	(0)	3685687
24	18.9	6.4	4.0	chr7	86206895	86206988	(73138985)	+	A-rich	Low_complexity	1	100	(0)	3685688
2528	17.2	0.9	6.4	chr7	86206990	86207403	(73138570)	C	MER52-int	LTR/ERV1	(6650)	441	53	3685684
14	16.6	2.3	4.4	chr7	87059455	87059498	(72286475)	+	(GCCCCC)n	Simple_repeat	1	45	(0)	3686719
29	14.5	3.5	5.7	chr7	87059714	87059833	(72286140)	+	G-rich	Low_complexity	1	117	(0)	3686720
10430	9.3	3.5	5.8	chr7	87204309	87205924	(72140049)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	3686916
797	21.6	7.1	2.3	chr7	87210032	87210287	(72135686)	C	MSTA	LTR/ERVL-MaLR	(159)	269	1	3686926
48	0.0	0.0	0.0	chr7	87628585	87628625	(71717348)	+	(GT)n	Simple_repeat	1	41	(0)	3687477
20	10.9	7.8	1.8	chr7	90596343	90596393	(68749580)	+	(GGC)n	Simple_repeat	1	55	(0)	3691355
13	9.8	0.0	0.0	chr7	90596516	90596537	(68749436)	+	(GAG)n	Simple_repeat	1	22	(0)	3691356
38	18.8	1.2	0.0	chr7	90895298	90895308	(68450665)	+	(TTCCC)n	Simple_repeat	1	12	(0)	3691754
169	6.3	0.0	0.0	chr7	90895309	90895508	(68450465)	+	(TCCTC)n	Simple_repeat	1	200	(0)	3691755
46	8.2	0.0	0.0	chr7	90895509	90895574	(68450399)	+	(CCCTC)n	Simple_repeat	1	66	(0)	3691756
1911	13.9	0.0	5.1	chr7	90895581	90895875	(68450098)	C	AluSz6	SINE/Alu	(32)	280	1	3691757
889	29.9	6.6	3.8	chr7	91026956	91027613	(68318360)	C	Charlie20a	DNA/hAT-Charlie	(23)	784	107	3691924
584	2.6	1.3	0.0	chr7	91027670	91027746	(68318227)	C	L1PB3	LINE/L1	(8)	6146	6069	3691925
142	8.5	0.5	2.7	chr7	91027759	91027982	(68317991)	+	(CCCCT)n	Simple_repeat	1	225	(0)	3691926
4156	13.4	3.9	2.6	chr7	91027983	91028261	(68317712)	C	L1PB3	LINE/L1	(88)	6066	5782	3691927
5032	9.6	2.2	4.7	chr7	91886846	91887740	(67458233)	+	SVA_A	Retroposon/SVA	1	872	(515)	3693024
2492	8.0	0.6	0.0	chr7	91901133	91901443	(67444530)	+	AluSp	SINE/Alu	1	313	(0)	3693046
475	28.0	2.2	1.7	chr7	91901511	91901688	(67444285)	+	L1ME3F	LINE/L1	6065	6243	(0)	3693047
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
16	31.2	0.0	0.0	chr7	92246063	92246121	(67099852)	+	(GGCGGT)n	Simple_repeat	1	59	(0)	3693578
13	24.4	4.2	0.0	chr7	92246093	92246140	(67099833)	+	G-rich	Low_complexity	1	50	(0)	3693579
3589	14.1	9.8	2.8	chr7	92442577	92443686	(66902287)	C	MER11A	LTR/ERVK	(0)	1236	1	3693898
2781	16.1	5.6	4.4	chr7	92478628	92479192	(66866781)	+	LTR9B	LTR/ERV1	10	581	(63)	3693948
1973	11.0	14.9	3.0	chr7	92479193	92479587	(66866386)	C	LTR7	LTR/ERV1	(0)	450	1	3693949
2190	8.9	1.1	0.7	chr7	92590620	92590931	(66755042)	C	AluSx1	SINE/Alu	(0)	312	1	3694135
13	16.0	0.0	3.2	chr7	94656131	94656161	(64689812)	+	(CTCCC)n	Simple_repeat	1	31	(0)	3696936
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
2344	10.7	0.3	0.0	chr7	95453296	95453593	(63892380)	C	AluSz6	SINE/Alu	(13)	299	1	3697992
226	17.5	3.6	14.9	chr7	95453594	95453633	(63892340)	C	L1MD3	LINE/L1	(178)	7817	7784	3697991
34	0.0	0.0	4.9	chr7	95453634	95453674	(63892299)	+	(TTCCCTTC)n	Simple_repeat	1	41	(0)	3697993
226	17.5	3.6	14.9	chr7	95453675	95453686	(63892287)	C	L1MD3	LINE/L1	(212)	7783	7769	3697991
42	22.9	1.6	3.1	chr7	95453692	95453814	(63892159)	+	(CTTCC)n	Simple_repeat	1	121	(0)	3697994
772	20.6	0.0	0.8	chr7	95453815	95453945	(63892028)	C	FLAM_A	SINE/Alu	(12)	130	1	3697995
1479	21.8	8.1	2.9	chr7	95454021	95454455	(63891518)	C	L1MB8	LINE/L1	(21)	6157	5685	3697996
57	1.7	3.3	0.0	chr7	95772112	95772171	(63573802)	+	(AC)n	Simple_repeat	1	62	(0)	3698468
12	8.8	10.5	2.4	chr7	95772508	95772545	(63573428)	+	G-rich	Low_complexity	1	42	(0)	3698469
15	29.2	2.9	1.4	chr7	95772666	95772733	(63573240)	+	(CCG)n	Simple_repeat	1	70	(0)	3698470
12	21.7	0.0	0.0	chr7	95772813	95772844	(63573129)	+	(CCACC)n	Simple_repeat	1	32	(0)	3698471
6508	5.5	1.2	0.1	chr7	96683209	96684034	(62661939)	+	L1PA7	LINE/L1	5318	6152	(2)	3699703
286	30.9	3.5	4.2	chr7	96684277	96684418	(62661555)	C	MLT1L	LTR/ERVL-MaLR	(369)	241	101	3699701
759	30.4	7.7	3.3	chr7	96684480	96684928	(62661045)	C	L2	LINE/L2	(706)	2713	2244	3699700
14	8.5	0.0	3.7	chr7	98106950	98106976	(61238997)	+	(GGC)n	Simple_repeat	1	27	(0)	3701943
20	20.6	2.0	0.0	chr7	98107089	98107138	(61238835)	+	(CGGA)n	Simple_repeat	1	51	(0)	3701944
16	11.7	0.0	0.0	chr7	98107207	98107234	(61238739)	+	(GCT)n	Simple_repeat	1	28	(0)	3701945
13	25.2	3.0	4.4	chr7	98107432	98107497	(61238476)	+	G-rich	Low_complexity	1	68	(0)	3701946
12	10.9	0.0	8.6	chr7	98211244	98211278	(61134695)	+	G-rich	Low_complexity	1	35	(0)	3702107
2497	7.0	0.3	1.0	chr7	98371782	98372093	(60973880)	C	AluY	SINE/Alu	(1)	310	1	3702423
2209	11.5	0.3	0.0	chr7	98372125	98372428	(60973545)	+	AluSx1	SINE/Alu	1	305	(7)	3702424
81	31.2	2.1	5.0	chr7	98400244	98400714	(60945259)	+	G-rich	Low_complexity	1	481	(0)	3702486
17	10.8	4.5	4.3	chr7	99143814	99143857	(60202116)	+	(CGCCC)n	Simple_repeat	1	46	(0)	3704035
6870	17.9	5.8	2.2	chr7	99198269	99199922	(60146051)	+	L1MB7	LINE/L1	4121	5837	(807)	3704166
19	22.8	4.3	1.4	chr7	99375124	99375192	(59970781)	+	(CCCCAGC)n	Simple_repeat	1	72	(0)	3704601
2218	11.1	0.3	1.0	chr7	100002929	100003235	(59342738)	C	AluSq2	SINE/Alu	(7)	306	2	3705654
2077	15.4	0.0	0.0	chr7	100003330	100003628	(59342345)	C	AluJr4	SINE/Alu	(9)	303	5	3705655
2462	9.4	0.0	0.0	chr7	100258098	100258405	(59087568)	C	AluSx4	SINE/Alu	(2)	308	1	3706170
17	3.4	0.0	8.3	chr7	100647334	100647369	(58698604)	+	(CCCCCT)n	Simple_repeat	1	36	(0)	3707042
1456	15.2	13.4	1.5	chr7	100706466	100706735	(58639238)	C	AluJo	SINE/Alu	(5)	307	1	3707180
21	6.5	0.0	0.0	chr7	100895809	100895840	(58450133)	+	(GGCCG)n	Simple_repeat	1	32	(0)	3707587
12	20.2	0.0	6.7	chr7	101154370	101154414	(58191559)	+	G-rich	Low_complexity	1	45	(0)	3708121
15	27.6	0.0	4.5	chr7	101154651	101154716	(58191257)	+	G-rich	Low_complexity	1	66	(0)	3708122
13	21.7	0.0	2.6	chr7	101179592	101179630	(58166343)	+	(GGCAGA)n	Simple_repeat	1	39	(0)	3708165
1765	15.6	0.0	1.8	chr7	101321942	101322217	(58023756)	C	AluJo	SINE/Alu	(21)	291	21	3708505
814	16.2	0.0	0.0	chr7	101411847	101411963	(57934010)	+	FRAM	SINE/Alu	56	172	(4)	3708744
504	21.3	0.0	1.1	chr7	102332801	102332894	(57013079)	+	AluJr	SINE/Alu	1	93	(219)	3710757
2457	18.3	11.9	2.9	chr7	102332997	102333508	(57012465)	+	LTR6A	LTR/ERV1	1	564	(0)	3710758
287	31.3	12.7	2.5	chr7	102612071	102612352	(56733621)	+	L2b	LINE/L2	3056	3370	(5)	3711411
180	18.8	3.0	0.0	chr7	104552757	104552788	(54793185)	C	L3	LINE/CR1	(1337)	2762	2730	3714316
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
29	10.0	5.7	4.0	chr7	105876591	105876663	(53469310)	+	G-rich	Low_complexity	1	74	(0)	3716733
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
25	25.3	4.1	4.0	chr7	106284497	106284617	(53061356)	+	(CCCGAGC)n	Simple_repeat	1	126	(0)	3717377
11	21.0	2.5	2.4	chr7	106284601	106284640	(53061333)	+	(CCTCCAC)n	Simple_repeat	1	41	(0)	3717378
32	3.0	0.0	0.0	chr7	106284719	106284752	(53061221)	+	(AGCCCC)n	Simple_repeat	1	34	(0)	3717379
312	27.9	9.8	7.3	chr7	106285214	106285391	(53060582)	C	L1M4b	LINE/L1	(6487)	380	198	3717380
12	15.4	5.3	2.5	chr7	106660255	106660292	(52685681)	+	(GCGCT)n	Simple_repeat	1	40	(0)	3717896
19	19.4	3.4	3.3	chr7	107044605	107044665	(52301308)	+	G-rich	Low_complexity	1	61	(0)	3718509
12	11.1	6.9	0.0	chr7	107044751	107044779	(52301194)	+	G-rich	Low_complexity	1	31	(0)	3718510
13	13.1	0.0	0.0	chr7	107045163	107045187	(52300786)	+	(GAG)n	Simple_repeat	1	25	(0)	3718511
15	24.9	0.0	5.2	chr7	108456439	108456496	(50889477)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3720552
14	15.5	0.0	7.1	chr7	108456716	108456757	(50889216)	+	G-rich	Low_complexity	1	42	(0)	3720553
10465	5.3	0.7	4.0	chr7	112696646	112698078	(46647895)	C	SVA_C	Retroposon/SVA	(0)	1384	1	3726180
6173	10.5	3.8	0.8	chr7	112698105	112699308	(46646665)	C	L1MA1	LINE/L1	(3767)	3798	2563	3726179
24	14.0	2.1	0.0	chr7	113086566	113086612	(46259361)	+	(GGC)n	Simple_repeat	1	48	(0)	3726685
18	7.8	0.0	0.0	chr7	114922577	114922603	(44423370)	+	(GGA)n	Simple_repeat	1	27	(0)	3729032
1537	10.8	0.0	2.1	chr7	115732905	115733141	(43612832)	+	L1PA8	LINE/L1	5941	6172	(0)	3730128
15	21.1	1.9	3.7	chr7	116210745	116210797	(43135176)	+	(GCGCGCG)n	Simple_repeat	1	54	(0)	3730740
11	11.3	6.9	0.0	chr7	116862408	116862436	(42483537)	+	(CACGCG)n	Simple_repeat	1	31	(0)	3731664
16	4.5	0.0	0.0	chr7	116862569	116862591	(42483382)	+	(GCC)n	Simple_repeat	1	23	(0)	3731665
16	14.1	5.1	0.0	chr7	116862909	116862955	(42483018)	+	G-rich	Low_complexity	1	49	(0)	3731666
3378	13.5	2.6	0.0	chr7	118519389	118519920	(40826053)	C	MER4D0	LTR/ERV1	(326)	546	1	3734031
22	8.4	0.0	4.8	chr7	120857358	120857401	(38488572)	+	(GGGGCG)n	Simple_repeat	1	41	(0)	3736915
14	12.5	0.0	0.0	chr7	120857964	120857989	(38487984)	+	(CCG)n	Simple_repeat	1	26	(0)	3736916
18	4.8	0.0	0.0	chr7	120857994	120858015	(38487958)	+	(A)n	Simple_repeat	1	22	(0)	3736917
22	3.9	0.0	0.0	chr7	120950749	120950775	(38395198)	+	(T)n	Simple_repeat	1	27	(0)	3737033
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
13	8.5	0.0	3.7	chr7	122144145	122144171	(37201802)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3738703
934	23.1	26.4	1.4	chr7	122666642	122667140	(36678833)	+	LTR41	LTR/ERVL	100	767	(1)	3739384
17	5.3	9.3	4.3	chr7	122886177	122886219	(36459754)	+	(GCC)n	Simple_repeat	1	47	(0)	3739683
14	15.9	0.0	0.0	chr7	124765942	124765969	(34580004)	+	(CCT)n	Simple_repeat	1	28	(0)	3742264
16	7.4	0.0	6.1	chr7	124766199	124766231	(34579742)	+	(GGGTGG)n	Simple_repeat	1	33	(0)	3742265
14	15.3	2.6	2.6	chr7	124766345	124766382	(34579591)	+	G-rich	Low_complexity	1	39	(0)	3742266
18	23.0	8.5	3.1	chr7	127392851	127392968	(31953005)	+	(GCCGAGG)n	Simple_repeat	1	128	(0)	3745668
13	23.2	2.1	2.1	chr7	127548816	127548838	(31797135)	+	(AATTA)n	Simple_repeat	5	27	(0)	3745895
1210	29.1	4.3	1.3	chr7	127548849	127549301	(31796672)	C	MLT1J	LTR/ERVL-MaLR	(45)	467	1	3745896
20	25.5	1.1	6.3	chr7	127588308	127588401	(31757572)	+	G-rich	Low_complexity	1	95	(0)	3745955
15	27.6	4.6	0.0	chr7	127588434	127588498	(31757475)	+	(CCCGCG)n	Simple_repeat	1	68	(0)	3745956
11	25.3	0.0	4.3	chr7	127588585	127588630	(31757343)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3745957
12	24.2	2.5	0.0	chr7	128167315	128167354	(31178619)	+	(GCGTGT)n	Simple_repeat	1	41	(0)	3746728
21	13.2	5.8	1.8	chr7	128192635	128192686	(31153287)	+	(CCT)n	Simple_repeat	1	55	(0)	3746771
13	27.4	1.9	1.8	chr7	128192804	128192857	(31153116)	+	(CCTCT)n	Simple_repeat	1	55	(0)	3746772
6830	7.7	18.3	0.3	chr7	128280124	128281160	(31064813)	C	MER11A	LTR/ERVK	(0)	1266	1	3746946
27	0.0	0.0	3.3	chr7	128361727	128361756	(30984217)	+	(CCT)n	Simple_repeat	1	30	(0)	3747076
596	17.1	4.6	0.0	chr7	128701220	128701362	(30644611)	C	LTR10A	LTR/ERV1	(79)	530	413	3747823
50	12.6	0.0	4.1	chr7	128701365	128701461	(30644512)	+	G-rich	Low_complexity	1	97	(0)	3747824
2076	13.8	10.5	2.0	chr7	128701462	128701852	(30644121)	C	LTR10A	LTR/ERV1	(181)	428	1	3747823
13	10.0	0.0	0.0	chr7	129780818	129780839	(29565134)	+	(GCC)n	Simple_repeat	1	22	(0)	3749821
12	21.6	6.4	1.1	chr7	129786467	129786523	(29559450)	+	G-rich	Low_complexity	1	60	(0)	3749830
2248	10.0	0.3	2.8	chr7	129786583	129786903	(29559070)	C	AluSp	SINE/Alu	(0)	313	1	3749831
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
16	24.7	0.0	0.0	chr7	129825231	129825265	(29520708)	+	(TC)n	Simple_repeat	1	35	(0)	3749924
648	25.9	5.8	2.6	chr7	130079358	130079676	(29266297)	C	L1M5	LINE/L1	(2157)	3989	3663	3750529
117	21.9	1.1	1.1	chr7	130079706	130079969	(29266004)	+	(CCTC)n	Simple_repeat	1	265	(0)	3750531
13	28.8	0.0	1.9	chr7	130668500	130668551	(28677422)	+	(CCGGCC)n	Simple_repeat	1	52	(0)	3751445
349	27.0	11.4	7.5	chr7	130731436	130731595	(28614378)	+	MIR3	SINE/MIR	8	174	(34)	3751556
238	25.8	1.5	1.5	chr7	131282738	131282804	(28063169)	C	MER5A	DNA/hAT-Charlie	(6)	183	117	3752532
275	29.9	0.0	1.1	chr7	131282755	131282842	(28063131)	+	MER5A	DNA/hAT-Charlie	36	122	(67)	3752533
11297	11.0	1.0	2.9	chr7	131306267	131307928	(28038045)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3752589
2091	11.4	5.8	7.2	chr7	131307929	131308261	(28037712)	+	THE1D	LTR/ERVL-MaLR	1	343	(38)	3752589
1920	18.1	0.0	0.0	chr7	133012482	133012780	(26333193)	+	AluJb	SINE/Alu	1	299	(13)	3755253
61	9.8	0.0	0.0	chr7	133012781	133012870	(26333103)	+	(GGAGG)n	Simple_repeat	1	90	(0)	3755254
2347	11.2	0.0	0.0	chr7	133012904	133013206	(26332767)	+	AluSx1	SINE/Alu	1	303	(9)	3755255
12	19.6	2.9	0.0	chr7	133253193	133253227	(26092746)	+	(GGAGGCA)n	Simple_repeat	1	36	(0)	3755685
436	32.1	12.4	5.2	chr7	134167683	134168070	(25177903)	+	L2a	LINE/L2	2995	3414	(12)	3757061
15	14.4	0.0	0.0	chr7	134891699	134891722	(24454251)	+	(T)n	Simple_repeat	1	24	(0)	3758187
21	0.0	0.0	0.0	chr7	134891746	134891768	(24454205)	+	(A)n	Simple_repeat	1	23	(0)	3758188
12	20.1	2.6	2.6	chr7	135977720	135977757	(23368216)	+	(TTCC)n	Simple_repeat	1	39	(0)	3759917
12	23.1	0.0	2.6	chr7	135977742	135977779	(23368194)	+	(CCCT)n	Simple_repeat	1	38	(0)	3759918
234	20.4	5.3	1.8	chr7	137880197	137880251	(21465722)	C	LTR5	LTR/ERVK	(362)	607	551	3762527
600	17.1	5.8	2.6	chr7	138402727	138402843	(20943130)	+	FLAM_C	SINE/Alu	1	121	(22)	3763541
49	3.1	0.0	4.1	chr7	138402844	138402933	(20943040)	+	(GGGGA)n	Simple_repeat	1	86	(0)	3763542
29	0.0	2.9	2.8	chr7	138926271	138926305	(20419668)	+	(CTTTTT)n	Simple_repeat	1	36	(0)	3764557
1840	15.8	1.1	0.0	chr7	138926306	138926584	(20419389)	C	AluSx1	SINE/Alu	(30)	282	1	3764558
32	0.0	0.0	0.0	chr7	138981540	138981569	(20364404)	+	(GCCT)n	Simple_repeat	1	30	(0)	3764672
1960	12.0	5.2	0.6	chr7	138989834	138990144	(20355829)	C	L1MA8	LINE/L1	(391)	5900	5575	3764687
2260	9.0	0.0	0.7	chr7	138990421	138990709	(20355264)	+	AluSc	SINE/Alu	2	288	(21)	3764688
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
229	37.5	4.8	0.6	chr7	139732291	139732451	(19613522)	C	MamRTE1	LINE/RTE-BovB	(2189)	1623	1456	3766099
28	3.3	0.0	0.0	chr7	139777806	139777836	(19568137)	+	(CGC)n	Simple_repeat	1	31	(0)	3766165
838	24.6	3.9	0.8	chr7	139778909	139779158	(19566815)	+	MER112	DNA/hAT-Charlie	1	258	(3)	3766166
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
15	20.6	0.0	4.2	chr7	140640622	140640669	(18705304)	+	(GCCCTCC)n	Simple_repeat	1	48	(0)	3767937
19	24.8	2.1	6.1	chr7	140924604	140924699	(18421274)	+	(CGGCGC)n	Simple_repeat	1	98	(0)	3768435
32	2.3	4.3	2.1	chr7	140924758	140924803	(18421170)	+	(GGAGGC)n	Simple_repeat	1	48	(0)	3768436
239	32.0	8.7	1.6	chr7	141550770	141551077	(17794896)	+	L2a	LINE/L2	2920	3251	(175)	3769472
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
226	35.8	3.9	0.0	chr7	142616736	142616858	(16729115)	C	MIRb	SINE/MIR	(30)	238	111	3770808
50	13.6	0.0	0.0	chr7	142616887	142616969	(16729004)	+	(GGGGA)n	Simple_repeat	1	83	(0)	3770809
247	29.6	3.6	0.0	chr7	142617138	142617218	(16728755)	C	L2	LINE/L2	(989)	2430	2347	3770810
360	25.9	5.1	2.6	chr7	142782982	142783096	(16562877)	C	MIRb	SINE/MIR	(41)	227	110	3770998
224	26.1	2.8	2.8	chr7	142783220	142783290	(16562683)	+	MIR3	SINE/MIR	92	162	(46)	3770999
17	3.5	6.7	0.0	chr7	142854748	142854777	(16491196)	+	(CCGAGC)n	Simple_repeat	1	32	(0)	3771081
16	24.4	0.0	2.0	chr7	142855030	142855079	(16490894)	+	G-rich	Low_complexity	1	50	(0)	3771082
26	0.0	0.0	0.0	chr7	143345824	143345848	(16000125)	+	(CTGGG)n	Simple_repeat	1	25	(0)	3771797
13	27.1	1.2	7.3	chr7	143362459	143362539	(15983434)	+	G-rich	Low_complexity	1	82	(0)	3771808
16	21.8	8.5	1.1	chr7	143362710	143362765	(15983208)	+	(CTCCG)n	Simple_repeat	1	61	(0)	3771809
34	0.0	0.0	0.0	chr7	143362766	143362796	(15983177)	+	(CGC)n	Simple_repeat	1	31	(0)	3771810
16	21.8	8.5	1.1	chr7	143362797	143362848	(15983125)	+	(CTCCG)n	Simple_repeat	1	55	(0)	3771811
12	25.8	5.5	0.0	chr7	143380491	143380545	(15965428)	+	(GCAGTCC)n	Simple_repeat	1	58	(0)	3771836
11	25.1	0.0	4.3	chr7	143380536	143380581	(15965392)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3771837
17	21.6	5.6	0.0	chr7	143381260	143381313	(15964660)	+	(CTCC)n	Simple_repeat	1	57	(0)	3771838
447	26.1	1.4	6.6	chr7	143407053	143407204	(15938769)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	23	3771872
30	0.0	0.0	0.0	chr7	143882194	143882219	(15463754)	+	(AC)n	Simple_repeat	1	26	(0)	3772443
52	0.0	0.0	0.0	chr7	143902554	143902600	(15443373)	+	(CCCCT)n	Simple_repeat	1	47	(0)	3772464
1852	11.4	3.4	0.8	chr7	143902607	143902868	(15443105)	C	AluJb	SINE/Alu	(35)	277	9	3772465
14	12.2	0.0	0.0	chr7	144403511	144403537	(14942436)	+	(CCCAC)n	Simple_repeat	1	27	(0)	3773171
15	20.8	2.2	2.1	chr7	144403755	144403800	(14942173)	+	(GCCGG)n	Simple_repeat	1	47	(0)	3773172
61	12.2	2.7	6.0	chr7	144737028	144737173	(14608800)	+	A-rich	Low_complexity	1	150	(0)	3773610
34	21.3	0.9	6.2	chr7	144737181	144737197	(14608776)	+	G-rich	Low_complexity	1	109	(0)	3773611
25	19.7	6.6	2.1	chr7	144737198	144737288	(14608685)	+	GA-rich	Low_complexity	1	97	(0)	3773612
500	18.9	19.0	0.0	chr7	144737315	144737425	(14608548)	+	MER5A	DNA/hAT-Charlie	53	189	(0)	3773613
177	10.1	1.7	1.4	chr7	146285660	146285946	(13060027)	+	(CCCTC)n	Simple_repeat	1	292	(0)	3775687
28	0.0	0.0	0.0	chr7	146285950	146285976	(13059997)	+	(TTCC)n	Simple_repeat	1	27	(0)	3775688
53	0.0	0.0	0.0	chr7	146285979	146286023	(13059950)	+	(TG)n	Simple_repeat	1	45	(0)	3775689
297	33.0	5.8	5.6	chr7	146286138	146286292	(13059681)	+	MIR3	SINE/MIR	12	165	(97)	3775690
548	21.8	9.0	0.0	chr7	146543363	146543504	(12802469)	C	L1ME3	LINE/L1	(99)	6063	5908	3776064
225	27.6	1.7	1.7	chr7	146543633	146543691	(12802282)	C	MIR3	SINE/MIR	(114)	94	36	3776065
2025	14.5	1.0	0.7	chr7	147025002	147025298	(12320675)	+	AluSz	SINE/Alu	1	298	(14)	3776697
103	10.8	2.9	4.2	chr7	147025303	147025512	(12320461)	+	G-rich	Low_complexity	1	216	(0)	3776698
663	15.8	1.6	0.1	chr7	147025525	147025650	(12320323)	C	MSTA	LTR/ERVL-MaLR	(293)	133	1	3776696
293	11.8	0.0	0.0	chr7	147025654	147025704	(12320269)	+	L1MC4a	LINE/L1	7825	7875	(7)	3776699
18	24.7	1.5	4.3	chr7	148699038	148699105	(10646868)	+	(CGG)n	Simple_repeat	1	69	(0)	3779245
28	31.0	0.0	0.0	chr7	148941873	148941948	(10404025)	+	(TA)n	Simple_repeat	1	76	(0)	3779657
588	11.8	0.0	0.0	chr7	148941968	148942043	(10403930)	C	AluSc	SINE/Alu	(30)	279	204	3779658
808	10.6	0.0	6.8	chr7	148942044	148942175	(10403798)	+	FLAM_C	SINE/Alu	13	135	(8)	3779659
27	3.4	0.0	0.0	chr7	148983132	148983161	(10362812)	+	(TTCA)n	Simple_repeat	1	30	(0)	3779764
549	22.9	5.1	4.6	chr7	149093222	149093395	(10252578)	C	PrimLTR79	LTR/ERV1	(0)	503	329	3780009
13	13.1	0.0	7.7	chr7	149459417	149459455	(9886518)	+	(CAGAGG)n	Simple_repeat	1	39	(0)	3780735
9178	19.6	3.0	0.9	chr7	149527865	149529552	(9816421)	+	LTR25-int	LTR/ERV1	36	1760	(5428)	3780816
7735	18.1	3.7	2.0	chr7	149529583	149531015	(9814958)	+	LTR25-int	LTR/ERV1	2282	4634	(1484)	3780816
658	1.4	0.0	0.0	chr7	149635687	149635758	(9710215)	+	tRNA-Cys-TGY	tRNA	1	72	(3)	3780964
379	17.2	1.5	0.0	chr7	149635993	149636056	(9709917)	C	tRNA-Cys-TGY	tRNA	(3)	72	8	3780965
18146	7.4	3.4	1.6	chr7	149650724	149651480	(9694493)	C	HERVK9-int	LTR/ERVK	(3520)	791	1	3780988
3936	6.0	3.1	0.2	chr7	149651481	149651977	(9693996)	C	MER9a3	LTR/ERVK	(0)	512	1	3780990
5412	11.6	0.8	0.6	chr7	149676443	149677221	(9668752)	+	LTR17	LTR/ERV1	1	780	(0)	3781018
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
14	15.4	6.7	2.1	chr7	150368946	150368990	(8976983)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	3781959
5441	11.4	9.6	3.3	chr7	150559402	150560492	(8785481)	+	MER11A	LTR/ERVK	1	1266	(0)	3782202
459	25.9	9.4	0.0	chr7	150560498	150560632	(8785341)	C	ERVL-E-int	LTR/ERVL	(824)	4843	4695	3782203
359	29.0	14.5	2.1	chr7	150963231	150963448	(8382525)	+	MIRb	SINE/MIR	2	231	(37)	3782712
40	30.3	1.3	2.6	chr7	150988271	150988423	(8357550)	+	(TGTA)n	Simple_repeat	1	155	(0)	3782751
12	7.8	7.4	0.0	chr7	151007570	151007596	(8338377)	+	G-rich	Low_complexity	1	29	(0)	3782777
18	27.5	7.3	0.0	chr7	151061675	151061774	(8284199)	+	(CTCCTCT)n	Simple_repeat	1	107	(0)	3782840
16	31.1	0.0	0.0	chr7	151167483	151167541	(8178432)	+	(GCCCCC)n	Simple_repeat	1	59	(0)	3782990
223	32.5	9.6	0.0	chr7	151200821	151200971	(8145002)	C	MIR3	SINE/MIR	(12)	196	30	3783045
11	25.3	0.0	4.3	chr7	151410196	151410213	(7935760)	+	(CTCCGC)n	Simple_repeat	1	45	(0)	3783390
13	16.6	0.0	0.0	chr7	151410214	151410240	(7935733)	+	(GCC)n	Simple_repeat	1	27	(0)	3783391
15	23.4	3.9	5.0	chr7	151631866	151631942	(7714031)	+	(CCCCGGA)n	Simple_repeat	1	80	(0)	3783798
13	18.8	0.0	5.0	chr7	151632021	151632060	(7713913)	+	(GGCCG)n	Simple_repeat	1	40	(0)	3783799
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
30	6.5	2.0	2.0	chr7	151676239	151676288	(7669685)	+	(GAGGG)n	Simple_repeat	1	51	(0)	3783882
1546	24.9	2.9	1.0	chr7	151676725	151677125	(7668848)	+	MLT1C	LTR/ERVL-MaLR	59	467	(0)	3783883
1674	24.5	5.5	0.5	chr7	151769267	151769701	(7576272)	+	MLT1C	LTR/ERVL-MaLR	6	463	(4)	3784017
3482	20.0	3.9	1.4	chr7	151769915	151770618	(7575355)	+	MER72	LTR/ERV1	1	722	(0)	3784018
22	23.3	4.3	0.0	chr7	151876026	151876095	(7469878)	+	(CTCCC)n	Simple_repeat	1	73	(0)	3784165
18	23.4	4.0	3.9	chr7	151877458	151877532	(7468441)	+	(CGC)n	Simple_repeat	1	78	(0)	3784167
2097	18.2	1.9	6.9	chr7	151896999	151897446	(7448527)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	8	3784197
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
23	12.4	3.5	5.0	chr7	152025935	152025992	(7319981)	+	(GCG)n	Simple_repeat	1	60	(0)	3784463
2238	18.4	6.0	8.0	chr7	152072352	152072976	(7272997)	+	LTR10E	LTR/ERV1	1	612	(21)	3784513
2390	9.3	1.0	0.0	chr7	152317863	152318162	(7027811)	+	AluSx1	SINE/Alu	5	307	(5)	3784868
2088	9.8	1.0	8.0	chr7	152318323	152318648	(7027325)	+	AluSx	SINE/Alu	2	304	(8)	3784869
12	7.2	10.3	0.0	chr7	152411483	152411511	(6934462)	+	(CTCC)n	Simple_repeat	1	32	(0)	3785063
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
395	26.1	6.3	4.3	chr7	152639921	152640060	(6705913)	+	HAL1	LINE/L1	2	144	(2363)	3785639
1744	13.2	9.0	0.0	chr7	152640192	152640464	(6705509)	C	AluSx3	SINE/Alu	(10)	301	2	3785640
255	36.3	5.4	2.5	chr7	152712423	152712583	(6633390)	C	MIRc	SINE/MIR	(3)	265	100	3785819
252	12.6	0.5	1.4	chr7	152712636	152713050	(6632923)	+	(CCCTC)n	Simple_repeat	1	417	(0)	3785820
868	22.6	0.0	4.3	chr7	152713055	152713240	(6632733)	C	AluJb	SINE/Alu	(0)	312	135	3785821
2291	12.0	0.7	0.0	chr7	152713248	152713555	(6632418)	C	AluSz	SINE/Alu	(2)	310	1	3785822
4396	15.5	0.8	1.5	chr7	152752209	152752823	(6593150)	C	MER72	LTR/ERV1	(0)	722	112	3785930
1869	14.8	3.6	10.7	chr7	152752824	152752906	(6593067)	C	THE1B	LTR/ERVL-MaLR	(0)	364	303	3785931
2149	12.7	0.0	0.0	chr7	152752907	152753197	(6592776)	C	AluSx1	SINE/Alu	(14)	298	8	3785932
593	29.7	8.9	4.1	chr7	152759225	152759543	(6586430)	C	L2a	LINE/L2	(0)	3426	3091	3785944
13	19.5	0.0	2.7	chr7	152759662	152759698	(6586275)	+	G-rich	Low_complexity	1	37	(0)	3785945
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
17	7.9	0.0	0.0	chr7	154892563	154892589	(4453384)	+	(GGCGG)n	Simple_repeat	1	27	(0)	3788875
34	29.4	3.1	2.4	chr7	155002952	155003111	(4342862)	+	(CCGCCC)n	Simple_repeat	1	165	(0)	3789014
21	20.0	3.7	1.8	chr7	155003088	155003141	(4342832)	+	(CG)n	Simple_repeat	1	56	(0)	3789015
14	27.5	2.9	2.8	chr7	155003419	155003487	(4342486)	+	G-rich	Low_complexity	1	71	(0)	3789016
914	24.5	10.8	0.4	chr7	155204985	155205258	(4140715)	+	Charlie1a	DNA/hAT-Charlie	1043	1348	(107)	3789347
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
16	26.6	1.7	1.6	chr7	155297434	155297493	(4048480)	+	G-rich	Low_complexity	1	61	(0)	3789476
78	30.5	0.4	0.8	chr7	155409842	155410085	(3935888)	+	(GT)n	Simple_repeat	1	245	(0)	3789597
14	12.8	5.9	0.0	chr7	155410148	155410181	(3935792)	+	G-rich	Low_complexity	1	36	(0)	3789598
15	24.6	2.0	2.0	chr7	155644567	155644616	(3701357)	+	(CGG)n	Simple_repeat	1	51	(0)	3789931
18	13.8	0.0	6.5	chr7	155804228	155804273	(3541700)	+	(GCCC)n	Simple_repeat	1	46	(0)	3790110
13	10.7	0.0	8.3	chr7	155804765	155804800	(3541173)	+	G-rich	Low_complexity	1	36	(0)	3790111
11411	9.9	0.9	0.2	chr7	156860499	156862068	(2483905)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3791452
18	17.0	4.3	0.0	chr7	157000581	157000626	(2345347)	+	G-rich	Low_complexity	1	48	(0)	3791691
13	13.9	2.9	2.9	chr7	157000719	157000752	(2345221)	+	GA-rich	Low_complexity	1	35	(0)	3791692
636	22.9	9.1	2.8	chr7	157000757	157001003	(2344970)	C	L1MB2	LINE/L1	(16)	6155	5892	3791693
2521	8.4	0.7	0.0	chr7	157298180	157298489	(2047484)	+	AluSx1	SINE/Alu	1	312	(0)	3792223
946	25.5	13.5	4.7	chr7	157298490	157298759	(2047214)	+	MLT1C	LTR/ERVL-MaLR	184	467	(0)	3792222
598	29.8	6.2	4.7	chr7	157442556	157442838	(1903135)	+	MLT1D	LTR/ERVL-MaLR	137	435	(70)	3792479
1837	17.1	2.7	0.6	chr7	157442839	157443168	(1902805)	C	MER1B	DNA/hAT-Charlie	(2)	337	1	3792480
41	17.1	3.8	5.2	chr7	157684341	157684471	(1661502)	+	GA-rich	Low_complexity	1	136	(0)	3792666
25	7.2	2.1	4.1	chr7	157684569	157684616	(1661357)	+	(CCCCT)n	Simple_repeat	1	49	(0)	3792667
18	7.5	8.9	2.0	chr7	157685060	157685104	(1660869)	+	(CCTCGCC)n	Simple_repeat	1	49	(0)	3792668
15	19.9	0.0	4.5	chr7	157689066	157689109	(1656864)	+	(CCG)n	Simple_repeat	1	44	(0)	3792670
26	31.0	0.0	4.2	chr7	157693050	157693169	(1652804)	+	G-rich	Low_complexity	1	120	(0)	3792673
16	17.6	0.0	2.9	chr7	157693243	157693276	(1652697)	+	(GT)n	Simple_repeat	1	34	(0)	3792674
29	35.1	0.0	0.0	chr7	157879331	157879342	(1466631)	+	(AC)n	Simple_repeat	1	96	(0)	3792814
30	24.3	0.0	2.4	chr7	157879343	157879426	(1466547)	+	(ACACGC)n	Simple_repeat	1	84	(0)	3792815
17	0.0	0.0	0.0	chr7	157879837	157879855	(1466118)	+	(A)n	Simple_repeat	1	19	(0)	3792816
385	8.9	0.2	0.0	chr7	158395285	158395820	(950153)	+	(GAGGGGC)n	Simple_repeat	1	537	(0)	3793216
336	27.0	5.8	5.7	chr7	158410660	158410841	(935132)	+	MLT1C	LTR/ERVL-MaLR	49	242	(263)	3793228
23	15.6	0.0	0.0	chr7	158587621	158587664	(758309)	+	(GCAGCA)n	Simple_repeat	1	44	(0)	3793401
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
12	25.5	0.0	6.9	chr7	158829566	158829623	(516350)	+	G-rich	Low_complexity	1	58	(0)	3793757
2535	6.4	0.0	1.6	chr7	158855935	158856245	(489728)	C	AluYh3	SINE/Alu	(5)	306	1	3793798
315	31.1	13.6	1.6	chr7	158858616	158858808	(487165)	C	HAL1	LINE/L1	(589)	1918	1699	3793800
87	15.1	1.7	2.2	chr7	158858817	158858991	(486982)	+	(TCCCC)n	Simple_repeat	1	178	(0)	3793804
884	23.2	2.3	0.0	chr7	158858992	158859159	(486814)	C	AluJb	SINE/Alu	(4)	308	137	3793805
533	22.6	3.5	1.8	chr8	654389	654555	(144484081)	+	L1ME3A	LINE/L1	5990	6159	(14)	3795048
18	30.2	2.1	3.1	chr8	1823735	1823828	(143314808)	+	G-rich	Low_complexity	1	96	(0)	3796153
321	18.9	6.8	0.2	chr8	2191107	2191927	(142946709)	+	(TCCT)n	Simple_repeat	1	877	(0)	3796531
872	26.2	6.8	5.8	chr8	6733980	6734938	(138403698)	C	L1MCa	LINE/L1	(5026)	2102	1033	3802518
510	27.3	0.8	0.2	chr8	10468816	10468953	(134669683)	+	L1MEg	LINE/L1	1	127	(6108)	3808108
716	32.2	2.9	1.5	chr8	10468947	10469220	(134669416)	+	L1MEg	LINE/L1	2266	2543	(4790)	3808108
37	3.9	1.9	0.0	chr8	10469314	10469333	(134669303)	+	(CTTC)n	Simple_repeat	1	21	(0)	3808109
100	3.0	2.6	4.5	chr8	10469334	10469484	(134669152)	+	(CCCT)n	Simple_repeat	1	155	(0)	3808110
37	3.9	1.9	0.0	chr8	10469485	10469517	(134669119)	+	(CTTC)n	Simple_repeat	2	34	(0)	3808111
2202	9.8	0.0	0.0	chr8	10469518	10469793	(134668843)	C	AluSc	SINE/Alu	(32)	277	2	3808112
18	6.4	6.1	0.0	chr8	10730665	10730697	(134407939)	+	(GGGA)n	Simple_repeat	1	35	(0)	3808552
182	29.3	6.5	0.0	chr8	10840184	10840241	(134298395)	C	L2c	LINE/L2	(69)	3318	3257	3808687
16	32.6	0.0	0.0	chr8	11201368	11201422	(133937214)	+	G-rich	Low_complexity	1	55	(0)	3809244
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
13	25.3	2.0	2.0	chr8	11808347	11808395	(133330241)	+	G-rich	Low_complexity	1	50	(0)	3810190
1037	19.9	5.7	0.0	chr8	13675755	13675985	(131462651)	+	MSTB2	LTR/ERVL-MaLR	1	245	(212)	3813040
3864	8.7	7.7	1.7	chr8	13675989	13676966	(131461670)	C	MER11A	LTR/ERVK	(0)	1266	1	3813041
4727	9.4	2.6	1.5	chr8	15473501	15474512	(129664124)	C	MER11A	LTR/ERVK	(0)	1266	1	3815420
16	13.1	0.0	0.0	chr8	17027213	17027237	(128111399)	+	(C)n	Simple_repeat	1	25	(0)	3817596
24	18.2	2.4	6.9	chr8	17027418	17027516	(128111120)	+	(GGC)n	Simple_repeat	1	94	(0)	3817597
12	16.9	2.9	2.8	chr8	17156407	17156441	(127982195)	+	(GGC)n	Simple_repeat	1	36	(0)	3817787
30	18.9	3.7	2.4	chr8	17156444	17156525	(127982111)	+	(CGC)n	Simple_repeat	1	85	(0)	3817788
18	14.0	2.4	2.4	chr8	17413210	17413250	(127725386)	+	(CCT)n	Simple_repeat	1	42	(0)	3818144
1869	19.7	7.7	3.3	chr8	18361119	18361675	(126776961)	C	LTR49	LTR/ERV1	(0)	622	1	3819537
1969	16.6	4.0	3.8	chr8	18361676	18362022	(126776614)	C	LTR49-int	LTR/ERV1	(0)	6331	5983	3819537
249	21.9	2.7	0.0	chr8	20020891	20020963	(125117673)	+	HAL1	LINE/L1	1246	1320	(1187)	3822140
3640	12.0	5.0	2.9	chr8	20020975	20022068	(125116568)	C	MER11A	LTR/ERVK	(0)	1236	1	3822141
1791	15.8	0.3	3.5	chr8	22088716	22089025	(123049611)	+	AluJr	SINE/Alu	13	312	(0)	3825567
24	30.6	1.9	2.8	chr8	22164682	22164786	(122973850)	+	GA-rich	Low_complexity	1	107	(0)	3825671
26	0.0	3.0	2.9	chr8	22164945	22164977	(122973659)	+	(GCCCGCG)n	Simple_repeat	1	34	(0)	3825672
18	19.6	0.0	4.0	chr8	22165021	22165070	(122973566)	+	(CCCGG)n	Simple_repeat	1	50	(0)	3825673
29	31.5	1.6	5.8	chr8	22165128	22165313	(122973323)	+	G-rich	Low_complexity	1	189	(0)	3825674
12	17.5	7.9	4.4	chr8	22561396	22561458	(122577178)	+	(GCCTGC)n	Simple_repeat	1	68	(0)	3826467
338	23.8	9.5	0.0	chr8	22561601	22561705	(122576931)	+	MIRb	SINE/MIR	114	229	(39)	3826468
15	22.2	5.1	1.6	chr8	23224821	23224879	(121913757)	+	G-rich	Low_complexity	1	62	(0)	3827566
445	4.2	11.2	0.0	chr8	23287674	23287744	(121850892)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	3827671
331	35.6	1.7	0.0	chr8	23287816	23287930	(121850706)	+	MIRb	SINE/MIR	23	139	(129)	3827672
27	26.6	0.0	0.0	chr8	23314808	23314883	(121823753)	+	A-rich	Low_complexity	1	76	(0)	3827700
1807	17.4	4.3	4.6	chr8	23560751	23561217	(121577419)	C	MER4CL34	LTR/ERV1	(0)	765	1	3828157
16	22.6	0.0	0.0	chr8	25457892	25457933	(119680703)	+	(CCGCCCC)n	Simple_repeat	1	42	(0)	3831137
17	24.1	3.0	2.9	chr8	25458125	25458191	(119680445)	+	(CCCG)n	Simple_repeat	1	69	(0)	3831138
21	23.9	3.6	3.5	chr8	28385626	28385709	(116752927)	+	G-rich	Low_complexity	1	87	(0)	3836023
17	24.8	5.2	3.9	chr8	28385829	28385925	(116752711)	+	(CCCGCCAC)n	Simple_repeat	1	102	(0)	3836024
17	0.0	0.0	0.0	chr8	28386490	28386508	(116752128)	+	(CA)n	Simple_repeat	1	19	(0)	3836025
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
18	0.0	0.0	0.0	chr8	28701618	28701640	(116436996)	+	(GGC)n	Simple_repeat	1	23	(0)	3836722
16	28.6	1.7	0.0	chr8	28890493	28890551	(116248085)	+	(CCTCCC)n	Simple_repeat	1	60	(0)	3837025
12	7.2	10.3	0.0	chr8	28890577	28890605	(116248031)	+	(CCCT)n	Simple_repeat	1	32	(0)	3837026
1024	15.0	13.8	6.5	chr8	30156019	30156121	(114982515)	C	AluJr	SINE/Alu	(177)	135	31	3839159
14	11.6	0.0	3.3	chr8	30156267	30156296	(114982340)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3839161
13	15.9	5.7	0.0	chr8	30385041	30385075	(114753561)	+	(GCCCA)n	Simple_repeat	1	37	(0)	3839686
11	17.2	7.7	0.0	chr8	30727772	30727810	(114410826)	+	(CGCGCGC)n	Simple_repeat	1	42	(0)	3840308
890	16.1	1.2	2.4	chr8	30728259	30728426	(114410210)	C	FRAM	SINE/Alu	(10)	166	1	3840309
13	18.5	2.6	2.5	chr8	33484703	33484741	(111653895)	+	G-rich	Low_complexity	1	40	(0)	3844585
4847	8.6	1.6	1.8	chr8	38022167	38023283	(107115353)	C	MER11A	LTR/ERVK	(0)	1266	1	3851461
44	3.5	0.0	0.0	chr8	38154458	38154507	(106984129)	+	(TTCC)n	Simple_repeat	1	50	(0)	3851759
13	13.1	2.7	5.3	chr8	38381285	38381321	(106757315)	+	(TTCC)n	Simple_repeat	1	38	(0)	3852192
14	20.5	5.4	5.1	chr8	38381502	38381575	(106757061)	+	(TCCCAAC)n	Simple_repeat	1	78	(0)	3852193
15	24.6	3.8	0.0	chr8	38381538	38381590	(106757046)	+	(CCCACCC)n	Simple_repeat	1	55	(0)	3852194
40	4.9	0.0	0.0	chr8	38381747	38381789	(106756847)	+	(CA)n	Simple_repeat	1	43	(0)	3852195
27	22.6	4.8	2.8	chr8	38382201	38382303	(106756333)	+	(GCC)n	Simple_repeat	1	108	(0)	3852196
16	3.6	6.9	0.0	chr8	38452020	38452048	(106686588)	+	(GAGGGA)n	Simple_repeat	1	31	(0)	3852306
62	3.3	0.0	0.0	chr8	38452185	38452246	(106686390)	+	(AC)n	Simple_repeat	1	62	(0)	3852307
1674	16.0	1.0	3.6	chr8	38452357	38452662	(106685974)	C	AluJr4	SINE/Alu	(14)	298	1	3852308
15	4.8	4.5	0.0	chr8	38467551	38467572	(106671064)	+	(AC)n	Simple_repeat	1	23	(0)	3852335
14	16.6	8.5	0.0	chr8	38468108	38468154	(106670482)	+	(GCTCGGC)n	Simple_repeat	1	51	(0)	3852336
5911	8.7	0.0	0.4	chr8	38867705	38868481	(106270155)	C	LTR17	LTR/ERV1	(6)	774	1	3853092
246	20.9	0.0	0.0	chr8	41335887	41335929	(103802707)	C	L2a	LINE/L2	(9)	3417	3375	3856827
192	23.7	0.0	0.0	chr8	41336166	41336203	(103802433)	+	MIR3	SINE/MIR	161	198	(10)	3856828
36	2.4	0.0	4.3	chr8	41767267	41767313	(103371323)	+	(GCCCCG)n	Simple_repeat	1	47	(0)	3857560
14	12.8	5.9	0.0	chr8	41767495	41767542	(103371094)	+	(GCCCTG)n	Simple_repeat	1	50	(0)	3857561
19	26.1	1.4	2.7	chr8	41767657	41767728	(103370908)	+	G-rich	Low_complexity	1	73	(0)	3857562
245	23.6	1.8	1.8	chr8	42114928	42114983	(103023653)	+	MLT1D	LTR/ERVL-MaLR	1	56	(449)	3858163
701	15.7	7.0	1.6	chr8	42244551	42244671	(102893965)	C	AluJb	SINE/Alu	(15)	297	170	3858422
17981	9.1	0.3	0.8	chr8	46610250	46614042	(98524594)	+	L1PA7	LINE/L1	2694	6469	(0)	3860948
1279	15.4	1.4	2.3	chr8	46956584	46956803	(98181833)	+	AluJb	SINE/Alu	84	301	(11)	3861298
17	15.4	5.6	0.0	chr8	46956805	46956840	(98181796)	+	(CA)n	Simple_repeat	1	38	(0)	3861299
7427	6.2	12.9	6.0	chr8	47286939	47288110	(97850526)	C	MER11A	LTR/ERVK	(0)	1266	1	3861736
20	17.7	4.3	4.2	chr8	47659595	47659663	(97478973)	+	(GCCCCC)n	Simple_repeat	1	72	(0)	3862216
47	4.0	0.0	0.0	chr8	48235890	48235940	(96902696)	+	(ATT)n	Simple_repeat	1	51	(0)	3863127
2504	5.1	3.1	3.1	chr8	48235942	48236267	(96902369)	C	LTR17	LTR/ERV1	(454)	326	1	3863128
2356	7.2	0.7	0.0	chr8	48236268	48236557	(96902079)	C	HERV17-int	LTR/ERV1	(0)	8626	8335	3863128
17	20.7	5.7	2.7	chr8	48582750	48582819	(96555817)	+	G-rich	Low_complexity	1	74	(0)	3863477
9510	20.6	6.4	1.1	chr8	48630201	48632438	(96506198)	C	L1MC3	LINE/L1	(176)	7609	5233	3863533
20	27.5	4.2	2.0	chr8	52330902	52330996	(92807640)	+	(AGAGGC)n	Simple_repeat	1	99	(0)	3867991
35	30.8	3.5	0.7	chr8	52331239	52331380	(92807256)	+	(AT)n	Simple_repeat	1	147	(0)	3867992
1448	18.9	11.3	5.3	chr8	52502690	52503120	(92635516)	+	LOR1b	LTR/ERV1	1	460	(1)	3868231
4273	9.7	2.9	3.4	chr8	52687913	52688935	(92449701)	+	MER11A	LTR/ERVK	1	1266	(0)	3868487
187	29.3	3.5	0.0	chr8	52941005	52941086	(92197550)	+	MER5A	DNA/hAT-Charlie	74	158	(31)	3868909
15	10.0	6.2	0.0	chr8	52941151	52941182	(92197454)	+	GA-rich	Low_complexity	1	34	(0)	3868910
12	13.7	2.0	10.0	chr8	54021999	54022047	(91116589)	+	(CGGCC)n	Simple_repeat	1	50	(0)	3870335
17	24.4	3.6	4.6	chr8	54457770	54457868	(90680768)	+	G-rich	Low_complexity	1	97	(0)	3871116
28	0.0	0.0	0.0	chr8	56210769	56210794	(88927842)	+	(GAG)n	Simple_repeat	1	26	(0)	3873665
16	14.4	0.0	0.0	chr8	56210928	56210958	(88927678)	+	(TTATT)n	Simple_repeat	1	31	(0)	3873666
30	2.9	0.0	2.6	chr8	57125601	57125638	(88012998)	+	(TATTT)n	Simple_repeat	1	38	(0)	3874878
1053	18.8	5.9	1.8	chr8	57125639	57125866	(88012770)	+	LTR1B	LTR/ERV1	587	824	(0)	3874879
3296	19.2	5.8	2.6	chr8	57125867	57126672	(88011964)	+	L1MC4a	LINE/L1	6985	7817	(65)	3874880
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
403	37.5	8.2	0.8	chr8	57451318	57451680	(87686956)	+	L3	LINE/CR1	3602	3993	(106)	3875337
1201	22.9	8.8	7.3	chr8	58160909	58161105	(86977531)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	157	3876226
40	0.0	0.0	0.0	chr8	58553556	58553592	(86585044)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	3876759
511	29.4	6.8	1.6	chr8	58881106	58881426	(86257210)	C	Charlie18a	DNA/hAT-Charlie	(2)	340	2	3877208
1704	15.4	3.4	0.0	chr8	60419123	60419381	(84719255)	C	AluJr	SINE/Alu	(44)	268	1	3879120
17	0.0	0.0	0.0	chr8	60419395	60419413	(84719223)	+	(T)n	Simple_repeat	1	19	(0)	3879121
2394	8.9	0.0	1.8	chr8	60419414	60419745	(84718891)	C	LTR17	LTR/ERV1	(454)	326	1	3879122
1776	9.4	2.0	0.0	chr8	60516181	60516425	(84622211)	C	AluSx	SINE/Alu	(2)	310	61	3879291
25	21.4	6.3	2.0	chr8	60516807	60516901	(84621735)	+	G-rich	Low_complexity	1	101	(0)	3879292
19	20.3	4.5	2.9	chr8	60516917	60516982	(84621654)	+	(CGG)n	Simple_repeat	1	69	(0)	3879293
17	14.6	0.0	6.8	chr8	60517072	60517115	(84621521)	+	(CGG)n	Simple_repeat	1	44	(0)	3879294
4865	11.8	5.3	0.9	chr8	61163520	61164265	(83974371)	C	LTR17	LTR/ERV1	(0)	780	1	3880275
4035	13.4	2.5	1.3	chr8	61164270	61164905	(83973731)	+	LTR9B	LTR/ERV1	1	644	(0)	3880276
9877	13.8	3.6	0.9	chr8	62906874	62908459	(82230177)	+	THE1B-int	LTR/ERVL-MaLR	3	1631	(0)	3882453
6204	11.3	4.0	0.8	chr8	63145648	63146610	(81992026)	C	HERVH48-int	LTR/ERV1	(5215)	1439	445	3882802
13	14.3	4.8	4.5	chr8	65841518	65841586	(79297050)	+	(CCG)n	Simple_repeat	1	69	(0)	3886498
1887	4.1	1.2	0.0	chr8	66247181	66247465	(78891171)	+	MER11A	LTR/ERVK	1	385	(881)	3887059
1953	6.9	4.9	0.4	chr8	66247463	66247902	(78890734)	+	MER11A	LTR/ERVK	770	1266	(0)	3887059
2144	6.4	0.0	0.0	chr8	66247903	66248167	(78890469)	+	HERVK11-int	LTR/ERVK	7689	7953	(0)	3887060
2075	9.0	3.0	1.7	chr8	66925864	66926164	(78212472)	+	AluSx3	SINE/Alu	1	305	(6)	3888376
360	32.7	11.1	0.0	chr8	67337286	67337502	(77801134)	+	L2a	LINE/L2	2469	2712	(707)	3889093
678	26.4	18.9	0.8	chr8	67337550	67337942	(77800694)	+	L2a	LINE/L2	2937	3417	(9)	3889093
1276	14.2	4.2	9.3	chr8	69994522	69994688	(75143948)	C	MER45R	DNA/hAT-Tip100	(889)	692	521	3893025
700	24.4	3.9	4.3	chr8	69994842	69995026	(75143610)	C	MER45R	DNA/hAT-Tip100	(1308)	273	89	3893025
16	28.6	1.4	2.8	chr8	70402238	70402308	(74736328)	+	(GGTGGA)n	Simple_repeat	1	72	(0)	3893734
21	18.8	0.0	0.0	chr8	72537121	72537163	(72601473)	+	GA-rich	Low_complexity	1	43	(0)	3896585
11156	7.8	1.7	1.1	chr8	73055510	73056094	(72082542)	+	L1PA6	LINE/L1	1	571	(5613)	3897358
11	18.2	2.4	4.8	chr8	73294579	73294619	(71844017)	+	(AGCGCGG)n	Simple_repeat	1	42	(0)	3897759
2079	17.7	3.0	14.0	chr8	74064285	74064764	(71073872)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3899109
702	22.1	3.2	3.6	chr8	74064765	74064887	(71073749)	+	L1ME3Cz	LINE/L1	582	706	(291)	3899108
4717	14.4	15.8	3.9	chr8	75174683	75175764	(69962872)	C	MER11B	LTR/ERVK	(0)	1236	1	3900628
9390	15.4	1.5	2.6	chr8	75351598	75353224	(69785412)	+	L1PB1	LINE/L1	280	1878	(4985)	3900829
44	15.7	0.0	0.0	chr8	75413279	75413357	(69725279)	+	G-rich	Low_complexity	1	79	(0)	3900924
1916	14.6	4.3	1.4	chr8	75413587	75413881	(69724755)	+	AluSx1	SINE/Alu	1	304	(8)	3900925
14	18.0	2.0	5.9	chr8	79767523	79767572	(65371064)	+	(CTCCG)n	Simple_repeat	1	51	(0)	3906479
17	10.3	0.0	3.0	chr8	79767998	79768030	(65370606)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	3906480
29	6.4	1.9	3.7	chr8	79768280	79768332	(65370304)	+	(GGC)n	Simple_repeat	1	54	(0)	3906481
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
21	14.4	1.6	6.5	chr8	80486106	80486166	(64652470)	+	(CCCCA)n	Simple_repeat	1	62	(0)	3907902
2193	5.8	1.7	0.3	chr8	80742570	80742863	(64395773)	+	HERV17-int	LTR/ERV1	8329	8626	(0)	3908310
2510	4.6	0.3	1.2	chr8	80742865	80743192	(64395444)	+	LTR17	LTR/ERV1	2	326	(454)	3908310
24	23.4	0.0	0.0	chr8	80743193	80743243	(64395393)	+	A-rich	Low_complexity	1	51	(0)	3908311
24	21.8	4.4	3.2	chr8	81112145	81112234	(64026402)	+	G-rich	Low_complexity	1	94	(0)	3908830
444	23.4	2.1	3.4	chr8	81112435	81112580	(64026056)	+	MER5B	DNA/hAT-Charlie	1	144	(34)	3908831
162	10.5	0.0	0.0	chr8	81842344	81842580	(63296056)	+	(GAGA)n	Simple_repeat	1	237	(0)	3909852
3360	19.4	15.5	0.9	chr8	83730693	83731625	(61407011)	C	MER52A	LTR/ERV1	(791)	964	1	3912226
193	32.8	1.5	0.0	chr8	84417029	84417095	(60721541)	C	L2a	LINE/L2	(12)	3414	3347	3913152
278	35.6	8.3	0.0	chr8	84417283	84417414	(60721222)	C	LTR103_Mam	LTR/ERV1?	(298)	177	34	3913153
12	23.1	0.0	4.5	chr8	85463509	85463552	(59675084)	+	G-rich	Low_complexity	1	44	(0)	3914607
35	0.0	0.0	0.0	chr8	85463770	85463802	(59674834)	+	(GGAGCCCC)n	Simple_repeat	1	33	(0)	3914608
14	15.9	7.1	0.0	chr8	85463829	85463870	(59674766)	+	(CCCCG)n	Simple_repeat	1	45	(0)	3914609
37	0.0	0.0	0.0	chr8	85464147	85464180	(59674456)	+	(CCCCGAT)n	Simple_repeat	1	34	(0)	3914610
21	21.8	2.9	7.4	chr8	86342672	86342776	(58795860)	+	G-rich	Low_complexity	1	108	(0)	3915917
1865	16.0	2.4	12.9	chr8	90005696	90006172	(55132464)	C	MSTB1	LTR/ERVL-MaLR	(10)	422	1	3920618
7741	5.9	12.0	3.6	chr8	90657213	90658368	(54480268)	C	MER11A	LTR/ERVK	(0)	1266	1	3921485
32	7.2	0.0	0.0	chr8	91040818	91040861	(54097775)	+	(GCTGCTGCC)n	Simple_repeat	1	44	(0)	3921971
25	30.0	0.0	2.1	chr8	91040900	91040992	(54097644)	+	GA-rich	Low_complexity	1	93	(0)	3921972
1384	29.8	5.0	12.4	chr8	92174225	92175449	(52963187)	+	L1MEi	LINE/L1	6	1135	(1077)	3923539
214	26.8	15.2	5.1	chr8	94719427	94719544	(50419092)	+	MIR3	SINE/MIR	18	149	(59)	3927427
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
704	26.1	6.8	4.4	chr8	95219689	95219961	(49918675)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	225	3928426
297	27.0	5.5	3.5	chr8	95219985	95220126	(49918510)	C	MLT1J	LTR/ERVL-MaLR	(367)	145	1	3928426
35	38.9	3.0	0.5	chr8	95597082	95597099	(49541537)	+	(TTTCC)n	Simple_repeat	1	192	(0)	3928996
52	25.9	3.0	2.3	chr8	95597100	95597268	(49541368)	+	(CCCTT)n	Simple_repeat	1	174	(0)	3928997
2089	11.5	2.6	3.2	chr8	95597271	95597582	(49541054)	C	AluSx1	SINE/Alu	(2)	310	1	3928998
15	19.6	0.0	0.0	chr8	96160834	96160868	(48977768)	+	(CCCCG)n	Simple_repeat	1	35	(0)	3929827
26	22.5	3.2	3.1	chr8	96160868	96160960	(48977676)	+	G-rich	Low_complexity	1	96	(0)	3929828
16	22.7	6.2	2.9	chr8	96160988	96161052	(48977584)	+	(CG)n	Simple_repeat	1	69	(0)	3929829
500	28.0	6.9	7.1	chr8	96419686	96420092	(48718544)	C	LTR78B	LTR/ERV1	(282)	1014	609	3930261
22	26.5	3.2	3.1	chr8	96493672	96493766	(48644870)	+	GA-rich	Low_complexity	1	98	(0)	3930399
19	3.0	5.6	2.6	chr8	96494116	96494151	(48644485)	+	(CCCCGAG)n	Simple_repeat	1	38	(0)	3930400
16	17.1	0.0	4.7	chr8	96574015	96574057	(48564579)	+	(CCCCT)n	Simple_repeat	1	43	(0)	3930515
2131	9.9	0.0	0.0	chr8	97735982	97736254	(47402382)	+	AluSx4	SINE/Alu	1	273	(37)	3932289
278	5.6	0.0	0.0	chr8	97736268	97736303	(47402333)	+	Alu	SINE/Alu	252	287	(14)	3932290
72	18.7	1.3	1.9	chr8	97736304	97736461	(47402175)	+	GA-rich	Low_complexity	1	160	(0)	3932291
424	30.3	4.3	1.3	chr8	97736531	97736679	(47401957)	C	MIRc	SINE/MIR	(55)	153	7	3932292
1998	10.4	0.4	0.0	chr8	97855771	97856030	(47282606)	+	AluSz	SINE/Alu	1	261	(51)	3932581
184	39.1	0.0	2.2	chr8	97856035	97856123	(47282513)	C	OldhAT1	DNA/hAT-Ac	(48)	2800	2714	3932582
17	26.2	7.3	0.7	chr8	97856129	97856207	(47282429)	+	GA-rich	Low_complexity	1	84	(0)	3932583
17	22.4	0.0	0.0	chr8	97869121	97869162	(47269474)	+	(AGAGGC)n	Simple_repeat	1	42	(0)	3932607
12642	8.4	0.2	2.6	chr8	98751968	98753639	(46384997)	+	L1PA13	LINE/L1	4555	6161	(2)	3934100
14	14.2	3.2	0.0	chr8	98825451	98825481	(46313155)	+	(GCC)n	Simple_repeat	1	32	(0)	3934227
390	29.9	8.4	6.3	chr8	98982418	98982592	(46156044)	C	MIR3	SINE/MIR	(14)	194	16	3934533
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
328	32.5	9.1	4.8	chr8	100889477	100889728	(44248908)	C	L2b	LINE/L2	(176)	3199	2936	3937731
238	32.7	9.6	2.6	chr8	100889917	100890070	(44248566)	+	MIRb	SINE/MIR	93	258	(10)	3937732
12	12.6	0.0	3.6	chr8	100951316	100951343	(44187293)	+	(CCCCG)n	Simple_repeat	1	28	(0)	3937832
17	12.8	2.1	6.1	chr8	100951402	100951449	(44187187)	+	G-rich	Low_complexity	1	49	(0)	3937833
14	0.0	0.0	0.0	chr8	100951473	100951490	(44187146)	+	(CCG)n	Simple_repeat	1	18	(0)	3937834
16	8.7	0.0	0.0	chr8	100951980	100952004	(44186632)	+	(GGC)n	Simple_repeat	1	25	(0)	3937835
13	8.5	4.0	0.0	chr8	101070127	101070151	(44068485)	+	(TGCC)n	Simple_repeat	1	26	(0)	3938089
34	0.0	0.0	0.0	chr8	101070381	101070409	(44068227)	+	(GT)n	Simple_repeat	1	29	(0)	3938090
24	6.8	0.0	0.0	chr8	101070410	101070440	(44068196)	+	(AG)n	Simple_repeat	1	31	(0)	3938091
576	20.6	8.8	1.9	chr8	101127046	101127203	(44011433)	+	MER5B	DNA/hAT-Charlie	7	176	(2)	3938201
2423	17.1	2.6	0.2	chr8	101142727	101143142	(43995494)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	3938233
363	23.5	5.5	6.4	chr8	101143651	101143759	(43994877)	C	L2a	LINE/L2	(3)	3423	3316	3938234
22	27.2	1.0	5.7	chr8	101205283	101205386	(43933250)	+	(CCCGCCC)n	Simple_repeat	1	105	(0)	3938341
12	21.7	1.6	7.9	chr8	101205648	101205709	(43932927)	+	(CGCCT)n	Simple_repeat	1	63	(0)	3938342
2140	11.2	0.3	3.1	chr8	101206361	101206681	(43931955)	+	AluJb	SINE/Alu	1	312	(0)	3938343
12	26.9	6.8	1.3	chr8	102239059	102239131	(42899505)	+	(CCCCG)n	Simple_repeat	1	78	(0)	3940005
12	19.3	0.0	10.3	chr8	102239559	102239616	(42899020)	+	(CCTCC)n	Simple_repeat	1	58	(0)	3940006
1035	18.1	2.8	6.7	chr8	102407855	102408079	(42730557)	C	MER20	DNA/hAT-Charlie	(2)	217	2	3940258
14	20.9	4.5	0.0	chr8	102412269	102412312	(42726324)	+	(CCCCCT)n	Simple_repeat	1	46	(0)	3940262
12	0.0	0.0	5.0	chr8	102412758	102412777	(42725859)	+	(GGA)n	Simple_repeat	1	20	(0)	3940263
12	32.5	0.0	6.3	chr8	102653750	102653828	(42484808)	+	GA-rich	Low_complexity	1	79	(0)	3940819
13	23.3	4.5	4.3	chr8	102653794	102653859	(42484777)	+	G-rich	Low_complexity	1	69	(0)	3940820
18	19.6	1.8	3.5	chr8	102653859	102653914	(42484722)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	3940821
11	24.1	0.0	0.0	chr8	102654453	102654486	(42484150)	+	(CGCCCC)n	Simple_repeat	1	34	(0)	3940824
12	30.4	1.7	1.7	chr8	102654760	102654817	(42483819)	+	(CCCACCT)n	Simple_repeat	1	59	(0)	3940825
15	17.7	2.5	2.4	chr8	102655235	102655274	(42483362)	+	(CCT)n	Simple_repeat	1	41	(0)	3940826
13	21.2	2.1	4.2	chr8	102655686	102655732	(42482904)	+	(CGC)n	Simple_repeat	1	48	(0)	3940827
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
21	22.1	0.0	1.8	chr8	102655972	102656027	(42482609)	+	(CGCCCCC)n	Simple_repeat	1	56	(0)	3940829
12	12.0	3.7	0.0	chr8	102656127	102656153	(42482483)	+	(CCGCT)n	Simple_repeat	1	28	(0)	3940830
1618	19.5	10.0	1.5	chr8	103111094	103111488	(42027148)	+	MLT1C	LTR/ERVL-MaLR	2	433	(34)	3941766
36	2.7	0.0	0.0	chr8	103140446	103140483	(41998153)	+	(GGAT)n	Simple_repeat	1	38	(0)	3941813
23	30.6	3.5	1.7	chr8	103499883	103499997	(41638639)	+	(GGC)n	Simple_repeat	1	119	(0)	3942425
326	29.1	6.9	10.7	chr8	104240642	104240828	(40897808)	C	MIR3	SINE/MIR	(4)	204	29	3943412
19	14.7	0.0	6.4	chr8	104588904	104588957	(40549679)	+	GA-rich	Low_complexity	1	50	(0)	3943935
33	2.9	0.0	0.0	chr8	104588965	104588999	(40549637)	+	(CGC)n	Simple_repeat	1	35	(0)	3943936
13	18.9	6.0	1.9	chr8	104589053	104589102	(40549534)	+	(GCCGCCC)n	Simple_repeat	1	53	(0)	3943937
12	16.3	2.8	2.7	chr8	105317986	105318021	(39820615)	+	G-rich	Low_complexity	1	37	(0)	3944977
12	5.5	0.0	0.0	chr8	105318462	105318480	(39820156)	+	(GCG)n	Simple_repeat	1	19	(0)	3944978
17	27.2	1.3	5.1	chr8	105318525	105318602	(39820034)	+	(CCTC)n	Simple_repeat	1	79	(0)	3944979
30	0.0	0.0	0.0	chr8	105318846	105318873	(39819763)	+	(GCG)n	Simple_repeat	1	28	(0)	3944980
16	29.0	0.0	0.0	chr8	105318884	105318937	(39819699)	+	(AGCCGC)n	Simple_repeat	1	54	(0)	3944981
15	11.1	0.0	3.2	chr8	106657558	106657588	(38481048)	+	(GCGGG)n	Simple_repeat	1	31	(0)	3946882
11	14.9	4.9	4.7	chr8	106658135	106658175	(38480461)	+	(GCCGGCCC)n	Simple_repeat	1	43	(0)	3946883
5517	11.0	0.1	0.9	chr8	106839019	106839797	(38298839)	C	LTR17	LTR/ERV1	(7)	773	1	3947152
49	19.7	3.9	1.5	chr8	107544250	107544378	(37594258)	+	G-rich	Low_complexity	1	134	(0)	3948128
16	15.2	0.0	5.0	chr8	109644662	109644701	(35493935)	+	(CGC)n	Simple_repeat	1	40	(0)	3951138
14	9.6	0.0	0.0	chr8	109644792	109644814	(35493822)	+	(CGC)n	Simple_repeat	1	23	(0)	3951139
269	8.3	0.0	0.0	chr8	111665823	111665858	(33472778)	+	MER31B	LTR/ERV1	1	36	(430)	3953810
4787	7.7	3.7	1.5	chr8	111665859	111666858	(33471778)	C	MER11A	LTR/ERVK	(0)	1266	1	3953811
14	0.0	0.0	0.0	chr8	115667937	115667954	(29470682)	+	(GGC)n	Simple_repeat	1	18	(0)	3958962
13	18.2	0.0	0.0	chr8	115668031	115668061	(29470575)	+	G-rich	Low_complexity	1	31	(0)	3958963
22	0.0	0.0	0.0	chr8	115668342	115668365	(29470271)	+	(T)n	Simple_repeat	1	24	(0)	3958964
22	18.8	5.1	3.6	chr8	115668447	115668525	(29470111)	+	(CGCGCCC)n	Simple_repeat	1	83	(0)	3958965
31	3.3	0.0	0.0	chr8	115668718	115668748	(29469888)	+	(AG)n	Simple_repeat	1	31	(0)	3958966
180	30.1	7.6	1.4	chr8	116810980	116811053	(28327583)	+	MIR	SINE/MIR	100	178	(84)	3960647
16	5.3	0.0	0.0	chr8	116811206	116811225	(28327411)	+	(A)n	Simple_repeat	1	20	(0)	3960648
2057	9.0	4.7	0.0	chr8	116811260	116811553	(28327083)	C	AluSc5	SINE/Alu	(0)	309	1	3960649
19	3.0	5.3	5.0	chr8	116938473	116938510	(28200126)	+	(GGC)n	Simple_repeat	1	40	(0)	3960865
2238	14.4	0.3	1.0	chr8	117846103	117846407	(27292229)	C	AluSz6	SINE/Alu	(9)	303	1	3962249
196	34.2	13.9	3.4	chr8	117846874	117847136	(27291500)	+	L2b	LINE/L2	3078	3372	(3)	3962250
17	12.5	0.0	0.0	chr8	118069721	118069746	(27068890)	+	(T)n	Simple_repeat	1	26	(0)	3962652
19	11.6	0.0	0.0	chr8	118622163	118622190	(26516446)	+	(G)n	Simple_repeat	1	28	(0)	3963593
40	16.0	2.1	3.2	chr8	119887095	119887100	(25251536)	+	(TCCCT)n	Simple_repeat	1	20	(75)	3965578
34	23.6	0.0	0.0	chr8	119887101	119887169	(25251467)	+	(C)n	Simple_repeat	1	69	(0)	3965579
40	16.0	2.1	3.2	chr8	119887170	119887187	(25251449)	+	(TCCCT)n	Simple_repeat	21	95	(0)	3965578
835	16.3	0.0	0.8	chr8	119887202	119887330	(25251306)	C	AluSx	SINE/Alu	(40)	272	145	3965580
62	14.0	3.0	2.9	chr8	119887370	119887506	(25251130)	+	(CCCCT)n	Simple_repeat	1	137	(0)	3965581
1954	11.2	0.0	1.9	chr8	119887528	119887796	(25250840)	C	AluSz	SINE/Alu	(40)	272	9	3965582
2702	16.6	4.2	3.7	chr8	121597154	121597667	(23540969)	+	MER21A	LTR/ERVL	404	922	(9)	3968526
313	30.7	6.5	6.2	chr8	124355688	124355993	(20782643)	+	L1MCb	LINE/L1	66	372	(5673)	3973550
484	15.3	2.3	1.2	chr8	124356113	124356198	(20782438)	+	MSTB	LTR/ERVL-MaLR	340	426	(0)	3973551
740	17.3	12.3	4.2	chr8	124356205	124356397	(20782239)	+	LTR48B	LTR/ERV1	434	644	(0)	3973552
668	30.6	12.6	5.7	chr8	124356466	124356704	(20781932)	+	L2	LINE/L2	1839	2085	(1334)	3973553
23	15.1	1.5	7.2	chr8	124372428	124372495	(20766141)	+	G-rich	Low_complexity	1	69	(0)	3973578
19	15.8	1.8	5.4	chr8	124372641	124372695	(20765941)	+	(GCAGCC)n	Simple_repeat	1	56	(0)	3973579
396	31.8	5.6	6.4	chr8	124573214	124573587	(20565049)	+	L2a	LINE/L2	3019	3425	(1)	3973938
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
20	15.6	0.0	4.3	chr8	126876586	126876632	(18262004)	+	(TTCT)n	Simple_repeat	1	47	(0)	3978350
54	14.8	1.0	1.0	chr8	129478998	129479098	(15659538)	+	(TCCCT)n	Simple_repeat	1	102	(0)	3983225
10337	10.6	5.8	3.6	chr8	129603162	129604753	(15533883)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3983442
4359	10.1	2.5	1.7	chr8	132723826	132724841	(12413795)	C	MER11A	LTR/ERVK	(0)	1266	1	3989125
18	13.5	2.2	4.3	chr8	133571802	133571846	(11566790)	+	(CCT)n	Simple_repeat	1	46	(0)	3990738
331	25.5	5.7	1.0	chr8	134685174	134685285	(10453351)	C	MIRc	SINE/MIR	(72)	158	42	3992680
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
213	23.5	0.0	3.8	chr8	140458276	140458328	(4680308)	+	L2b	LINE/L2	3099	3149	(226)	4001985
182	26.1	11.0	0.0	chr8	141127609	141127673	(4010963)	C	MIR3	SINE/MIR	(5)	203	131	4003234
245	31.9	3.1	0.0	chr8	141507953	141508046	(3630590)	C	MIRc	SINE/MIR	(142)	126	30	4003723
17	23.4	7.4	2.9	chr8	141788279	141788373	(3350263)	+	(CTCCT)n	Simple_repeat	1	102	(0)	4004130
36	24.8	1.1	8.5	chr8	142402911	142403096	(2735540)	+	(CCCCG)n	Simple_repeat	1	188	(0)	4004859
13	0.0	0.0	8.0	chr8	142403143	142403167	(2735469)	+	(GGCG)n	Simple_repeat	1	25	(0)	4004860
11	24.8	2.0	3.9	chr8	142700813	142700863	(2437773)	+	(CCTGCC)n	Simple_repeat	1	52	(0)	4005202
2200	9.7	0.3	0.3	chr8	143618327	143618626	(1520010)	+	AluSz	SINE/Alu	1	300	(12)	4006384
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
14	4.7	0.0	4.2	chr8	143815611	143815634	(1323002)	+	(GCG)n	Simple_repeat	1	24	(0)	4006703
27	0.0	3.5	0.0	chr8	143933868	143933896	(1204740)	+	(TGCCCC)n	Simple_repeat	1	30	(0)	4006858
13	9.3	0.0	0.0	chr8	143944284	143944306	(1194330)	+	(CCCT)n	Simple_repeat	1	23	(0)	4006862
13	23.2	0.0	2.4	chr8	144051677	144051718	(1086918)	+	G-rich	Low_complexity	1	42	(0)	4007032
947	27.9	10.0	3.0	chr8	144074071	144074432	(1064204)	+	Arthur1B	DNA/hAT-Tip100	2	391	(834)	4007066
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
13	30.2	0.0	0.0	chr8	144467711	144467755	(670881)	+	(CAG)n	Simple_repeat	1	45	(0)	4007646
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
287	25.8	8.5	2.0	chr8	144478530	144478628	(660008)	C	MIRc	SINE/MIR	(73)	195	90	4007653
15	10.0	0.0	7.9	chr8	144755323	144755360	(383276)	+	(CCGCC)n	Simple_repeat	1	38	(0)	4008042
957	18.8	11.2	0.0	chr8	144755894	144756122	(382514)	+	MER39B	LTR/ERV1	1	258	(395)	4008043
25	17.5	1.6	1.6	chr8	144786661	144786711	(351925)	+	GA-rich	Low_complexity	11	61	(0)	4008106
473	29.4	10.9	7.6	chr8	144799392	144799658	(338978)	C	L2a	LINE/L2	(3)	3423	3139	4008119
275	5.4	2.1	3.6	chr9	10001	10433	(138384284)	+	(TAACCC)n	Simple_repeat	1	442	(0)	4008489
3831	12.7	31.0	1.2	chr9	10436	11574	(138383143)	C	TAR1	Satellite/telo	(13)	2098	469	4008490
21	4.0	0.0	0.0	chr9	578330	578355	(137816362)	+	(TG)n	Simple_repeat	1	26	(0)	4009410
16	23.2	1.9	1.9	chr9	976573	976624	(137418093)	+	G-rich	Low_complexity	1	53	(0)	4010079
20	16.7	2.5	0.0	chr9	2017375	2017414	(136377303)	+	(GT)n	Simple_repeat	1	41	(0)	4011562
20	18.9	2.4	0.0	chr9	2017521	2017562	(136377155)	+	(GT)n	Simple_repeat	1	43	(0)	4011563
18	23.9	1.9	0.0	chr9	2017563	2017574	(136377143)	+	(GTGTGC)n	Simple_repeat	1	55	(0)	4011564
12	23.4	4.6	4.4	chr9	2621834	2621898	(135772819)	+	(CTCTCCG)n	Simple_repeat	1	68	(0)	4012376
25	24.1	4.8	0.0	chr9	2621899	2621913	(135772804)	+	(CTCCT)n	Simple_repeat	4	87	(0)	4012377
13	22.0	9.3	3.2	chr9	2622027	2622112	(135772605)	+	(CCTCCTT)n	Simple_repeat	1	94	(0)	4012378
26	0.0	0.0	0.0	chr9	2622147	2622171	(135772546)	+	(CGG)n	Simple_repeat	1	25	(0)	4012379
81	11.1	4.2	2.9	chr9	3532254	3532424	(134862293)	+	(TCTCCC)n	Simple_repeat	1	173	(0)	4013745
61	28.0	4.8	1.8	chr9	3785880	3786136	(134608581)	+	(TTCCC)n	Simple_repeat	4	267	(0)	4014104
54	4.5	7.5	1.0	chr9	4339789	4339899	(134054818)	+	(AGGGGG)n	Simple_repeat	1	118	(0)	4014878
21	13.0	0.0	4.3	chr9	4339881	4339926	(134054791)	+	A-rich	Low_complexity	1	46	(0)	4014879
13	26.4	3.2	3.1	chr9	5628961	5629022	(132765695)	+	(GCGCG)n	Simple_repeat	1	64	(0)	4016814
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
1869	27.2	13.4	6.4	chr9	6079232	6080313	(132314404)	+	HERVI-int	LTR/ERV1	14	1171	(6614)	4017508
37184	19.1	1.2	2.1	chr9	6080644	6087331	(132307386)	+	HERVI-int	LTR/ERV1	1144	7769	(16)	4017508
18	22.2	2.1	0.0	chr9	10612728	10612774	(127781943)	+	GA-rich	Low_complexity	1	48	(0)	4024011
24	9.0	1.9	5.6	chr9	10612946	10612998	(127781719)	+	(CGCT)n	Simple_repeat	1	54	(0)	4024012
2604	5.0	0.3	0.0	chr9	12977610	12977909	(125416808)	C	AluY	SINE/Alu	(7)	304	4	4027001
733	26.9	16.5	1.1	chr9	12977916	12978506	(125416211)	+	L2a	LINE/L2	2624	3426	(0)	4027002
926	15.2	1.6	2.6	chr9	13279835	13280023	(125114694)	C	MER53	DNA/hAT	(3)	190	4	4027390
10398	11.0	2.9	2.9	chr9	13834369	13835947	(124558770)	+	THE1B-int	LTR/ERVL-MaLR	1	1579	(1)	4028155
1953	14.0	8.0	2.3	chr9	13835949	13836291	(124558426)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4028155
2042	13.0	7.2	2.0	chr9	14142129	14142473	(124252244)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4028573
23	16.3	0.0	6.5	chr9	14313943	14314004	(124080713)	+	(GGCG)n	Simple_repeat	1	62	(0)	4028784
20	12.6	2.1	4.2	chr9	14314318	14314364	(124080353)	+	(CGCC)n	Simple_repeat	1	48	(0)	4028785
17	20.5	3.8	1.8	chr9	14315509	14315561	(124079156)	+	(GGCGG)n	Simple_repeat	1	55	(0)	4028787
17	25.3	0.0	4.8	chr9	14315562	14315567	(124079150)	+	(GCGG)n	Simple_repeat	4	62	(0)	4028788
27	20.8	1.8	0.0	chr9	14322297	14322353	(124072364)	+	(GT)n	Simple_repeat	1	58	(0)	4028795
12	24.1	0.0	0.0	chr9	14322573	14322606	(124072111)	+	(CGCCC)n	Simple_repeat	1	34	(0)	4028796
30	0.0	0.0	0.0	chr9	14395727	14395754	(123998963)	+	(T)n	Simple_repeat	1	28	(0)	4028919
16	22.0	0.0	6.7	chr9	15510372	15510431	(122884286)	+	G-rich	Low_complexity	1	60	(0)	4030657
6345	5.4	14.0	6.1	chr9	16394004	16395078	(121999639)	+	MER11A	LTR/ERVK	1	1266	(0)	4031898
13	20.8	0.0	0.0	chr9	16870803	16870835	(121523882)	+	(CCGC)n	Simple_repeat	1	33	(0)	4032494
1032	18.3	0.0	0.6	chr9	17553791	17553959	(120840758)	C	AluJb	SINE/Alu	(14)	298	131	4033488
187	10.1	2.0	1.3	chr9	17553964	17554345	(120840372)	+	(CTTT)n	Simple_repeat	1	384	(0)	4033489
2400	10.0	0.3	0.0	chr9	19238072	19238381	(119156336)	C	AluSp	SINE/Alu	(2)	311	1	4035940
660	26.0	2.0	5.8	chr9	19238382	19238416	(119156301)	C	MLT1C	LTR/ERVL-MaLR	(167)	300	268	4035939
129	8.0	0.9	3.7	chr9	19238447	19238660	(119156057)	+	(CCCTC)n	Simple_repeat	1	216	(0)	4035941
2136	12.7	0.3	0.0	chr9	19238662	19238952	(119155765)	C	AluSq2	SINE/Alu	(21)	292	1	4035942
4629	11.5	2.2	3.9	chr9	19402919	19403940	(118990777)	+	MER11A	LTR/ERVK	1	1266	(0)	4036264
16	15.8	2.2	4.3	chr9	19408910	19408955	(118985762)	+	(AGGCG)n	Simple_repeat	1	47	(0)	4036276
16	21.5	0.0	2.2	chr9	19789097	19789141	(118605576)	+	(CTGTGCG)n	Simple_repeat	1	45	(0)	4036889
16	13.9	2.3	4.5	chr9	20622066	20622108	(117772609)	+	G-rich	Low_complexity	1	44	(0)	4038137
17	4.3	0.0	0.0	chr9	20622409	20622432	(117772285)	+	(CGCT)n	Simple_repeat	1	24	(0)	4038138
18	7.8	0.0	0.0	chr9	20622452	20622478	(117772239)	+	(AGC)n	Simple_repeat	1	27	(0)	4038139
15	22.0	1.7	5.1	chr9	20622547	20622604	(117772113)	+	G-rich	Low_complexity	1	59	(0)	4038140
278	29.1	2.7	0.0	chr9	21031329	21031438	(117363279)	+	MIR	SINE/MIR	129	241	(21)	4038748
13	21.3	0.0	6.1	chr9	21031636	21031684	(117363033)	+	G-rich	Low_complexity	1	49	(0)	4038749
32	22.9	2.1	2.1	chr9	21559832	21559926	(116834791)	+	(GCC)n	Simple_repeat	1	97	(0)	4039359
5903	7.1	0.5	0.5	chr9	21726889	21727655	(116667062)	+	LTR17	LTR/ERV1	1	767	(13)	4039612
281	26.8	8.5	1.0	chr9	21802343	21802440	(116592277)	+	MIRb	SINE/MIR	163	268	(0)	4039722
16	13.1	0.0	0.0	chr9	21802470	21802494	(116592223)	+	(A)n	Simple_repeat	1	25	(0)	4039727
14	20.8	1.2	10.8	chr9	21974812	21974893	(116419824)	+	(CCG)n	Simple_repeat	1	83	(0)	4039935
23	20.5	4.4	4.2	chr9	21994457	21994547	(116400170)	+	(CCGCAC)n	Simple_repeat	1	95	(0)	4039969
739	22.9	12.5	1.5	chr9	24285998	24286355	(114108362)	C	L1ME3A	LINE/L1	(5220)	2113	1734	4042919
37	39.2	1.9	0.0	chr9	24286395	24286556	(114108161)	+	(CTTTC)n	Simple_repeat	1	165	(0)	4042923
1865	19.4	0.7	0.0	chr9	24286557	24286865	(114107852)	C	AluJb	SINE/Alu	(1)	311	1	4042924
1658	16.8	4.2	1.5	chr9	28782780	28783105	(109611612)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	14	4049047
969	25.9	8.1	1.2	chr9	28783204	28783524	(109611193)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	4049048
2376	6.2	1.0	2.0	chr9	32641190	32641481	(105753236)	+	AluY	SINE/Alu	1	289	(22)	4053982
53	13.7	0.0	0.0	chr9	32641482	32641570	(105753147)	+	(GGGGA)n	Simple_repeat	1	89	(0)	4053983
1900	17.1	2.2	8.1	chr9	32931115	32931283	(105463434)	C	MLT1A	LTR/ERVL-MaLR	(206)	168	2	4054454
1058	26.3	7.6	5.8	chr9	33012345	33012824	(105381893)	+	MLT1H2	LTR/ERVL-MaLR	1	489	(0)	4054595
364	28.4	5.1	1.3	chr9	33012936	33013085	(105381632)	+	L2a	LINE/L2	3268	3423	(3)	4054588
16	28.3	0.0	3.2	chr9	33167352	33167414	(105227303)	+	(GAGGCG)n	Simple_repeat	1	63	(0)	4054861
198	25.4	5.6	0.0	chr9	33436733	33436799	(104957918)	+	MIR3	SINE/MIR	35	105	(103)	4055439
30	0.0	0.0	0.0	chr9	33677010	33677037	(104717680)	+	(GCC)n	Simple_repeat	1	28	(0)	4055807
15	12.0	0.0	0.0	chr9	33677312	33677338	(104717379)	+	(CGC)n	Simple_repeat	1	27	(0)	4055808
15	0.0	0.0	0.0	chr9	33677386	33677404	(104717313)	+	(GCC)n	Simple_repeat	1	19	(0)	4055809
3713	15.5	5.3	0.3	chr9	33687361	33688039	(104706678)	+	MER72	LTR/ERV1	8	722	(0)	4055824
17	23.5	0.0	2.1	chr9	33750608	33750655	(104644062)	+	(GCGGA)n	Simple_repeat	1	48	(0)	4055916
15	28.0	3.3	0.0	chr9	33750846	33750905	(104643812)	+	G-rich	Low_complexity	1	62	(0)	4055917
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
28	2.9	2.9	0.0	chr9	33817125	33817159	(104577558)	+	(CCCT)n	Simple_repeat	1	36	(0)	4056031
13	25.3	6.0	1.4	chr9	33817376	33817399	(104577318)	+	(CCCCCT)n	Simple_repeat	1	69	(0)	4056032
13	20.4	2.4	2.4	chr9	33817400	33817440	(104577277)	+	(CCT)n	Simple_repeat	1	42	(0)	4056033
21	3.7	0.0	0.0	chr9	33817729	33817756	(104576961)	+	(CCG)n	Simple_repeat	1	28	(0)	4056034
22	3.1	3.0	0.0	chr9	33818366	33818399	(104576318)	+	(GGGGGT)n	Simple_repeat	1	35	(0)	4056035
613	15.8	14.2	0.0	chr9	34219533	34219659	(104175058)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	89	4057025
241	9.8	1.6	6.1	chr9	34219676	34220162	(104174555)	+	(CCCTC)n	Simple_repeat	1	495	(0)	4057026
1425	14.9	2.8	11.8	chr9	34220165	34220342	(104174375)	C	AluJr	SINE/Alu	(24)	288	141	4057027
12	24.4	2.6	0.0	chr9	34458382	34458420	(103936297)	+	G-rich	Low_complexity	1	40	(0)	4057471
2836	15.2	4.6	2.4	chr9	34505074	34505567	(103889150)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	4057549
13	30.6	0.0	6.2	chr9	34990136	34990216	(103404501)	+	(CCGCC)n	Simple_repeat	1	81	(0)	4058208
20	3.8	0.0	0.0	chr9	35490117	35490143	(102904574)	+	(CGC)n	Simple_repeat	1	27	(0)	4058939
271	33.6	7.6	4.7	chr9	35868944	35869302	(102525415)	C	L2	LINE/L2	(360)	3059	2690	4059538
440	23.2	2.9	2.9	chr9	36190486	36190587	(102204130)	C	MIRc	SINE/MIR	(69)	199	98	4060131
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
26	0.0	0.0	0.0	chr9	36401199	36401223	(101993494)	+	(GGGGC)n	Simple_repeat	1	25	(0)	4060562
153	21.3	6.2	2.7	chr9	37188465	37188994	(101205723)	+	(CTCTC)n	Simple_repeat	1	563	(0)	4062227
3492	24.0	5.0	4.4	chr9	37189038	37189402	(101205315)	C	L1MD2	LINE/L1	(5255)	1485	1114	4062225
292	33.3	5.0	3.5	chr9	37576487	37576741	(100817976)	+	L3	LINE/CR1	3736	3994	(105)	4062961
995	18.4	15.2	2.1	chr9	38552858	38553090	(99841627)	+	THE1D-int	LTR/ERVL-MaLR	955	1223	(408)	4064798
339	12.9	6.1	0.0	chr9	38553089	38553150	(99841567)	C	THE1D-int	LTR/ERVL-MaLR	(616)	1015	950	4064800
435	19.8	1.0	0.0	chr9	38553243	38553338	(99841379)	C	MSTA	LTR/ERVL-MaLR	(331)	97	1	4064801
1102	26.6	0.0	3.5	chr9	38553340	38553654	(99841063)	C	MSTA-int	LTR/ERVL-MaLR	(1)	1650	1347	4064801
34	17.4	1.4	0.0	chr9	39355540	39355610	(99039107)	+	(CTCCCC)n	Simple_repeat	1	72	(0)	4065982
1663	20.4	8.2	3.8	chr9	41109041	41110178	(97284539)	C	SATR1	Satellite	(40)	1188	1	4068217
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
3278	14.7	3.2	0.5	chr9	41274000	41274606	(97120111)	+	TAR1	Satellite/telo	1445	2068	(43)	4068410
53	12.2	1.1	0.0	chr9	42183479	42183567	(96211150)	+	(CTCCCC)n	Simple_repeat	1	90	(0)	4069679
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
18600	10.6	1.7	6.0	chr9	62840284	62843326	(75551391)	C	L1PBa	LINE/L1	(927)	5198	2140	4073706
3280	16.3	0.8	1.6	chr9	63781108	63781732	(74612985)	C	TAR1	Satellite/telo	(43)	2068	1449	4074736
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
48	14.9	1.1	0.0	chr9	66992642	66992730	(71401987)	+	G-rich	Low_complexity	1	90	(0)	4078141
14	17.1	11.9	0.0	chr9	68705180	68705238	(69689479)	+	(GGCAGCC)n	Simple_repeat	1	66	(0)	4080300
35	0.0	5.0	0.0	chr9	68705613	68705652	(69689065)	+	(CCCCTCCCG)n	Simple_repeat	1	42	(0)	4080301
51	25.2	3.4	3.8	chr9	69325390	69325595	(69069122)	+	(CGC)n	Simple_repeat	1	213	(0)	4081448
12	11.1	3.2	3.1	chr9	70420323	70420353	(67974364)	+	(CCCGCG)n	Simple_repeat	1	32	(0)	4083114
29	5.8	0.0	0.0	chr9	71768574	71768609	(66626108)	+	(CCT)n	Simple_repeat	1	36	(0)	4085192
17	0.0	0.0	0.0	chr9	71768898	71768919	(66625798)	+	(GGGC)n	Simple_repeat	1	22	(0)	4085193
13	13.3	6.1	0.0	chr9	71768975	71769007	(66625710)	+	(GCCCC)n	Simple_repeat	1	35	(0)	4085194
14	22.6	5.1	4.8	chr9	71910514	71910592	(66484125)	+	(CGCTCCC)n	Simple_repeat	1	83	(0)	4085497
16	20.0	2.5	0.0	chr9	71910975	71911014	(66483703)	+	(CCG)n	Simple_repeat	1	41	(0)	4085498
17	16.4	0.0	0.0	chr9	75028093	75028126	(63366591)	+	(GCC)n	Simple_repeat	1	34	(0)	4090399
13	8.5	4.0	0.0	chr9	75891146	75891170	(62503547)	+	(AGCG)n	Simple_repeat	1	26	(0)	4091629
38	0.0	0.0	0.0	chr9	75891532	75891564	(62503153)	+	(CA)n	Simple_repeat	1	33	(0)	4091630
6474	6.5	1.4	1.3	chr9	76246840	76247618	(62147099)	C	LTR17	LTR/ERV1	(0)	780	1	4092144
6066	16.9	3.0	2.0	chr9	76432666	76433782	(61960935)	+	LTR28C	LTR/ERV1	1	1129	(0)	4092534
6124	7.2	21.3	6.0	chr9	76434334	76435390	(61959327)	+	MER11A	LTR/ERVK	1	1262	(4)	4092538
1087	18.1	3.3	0.5	chr9	76462406	76462610	(61932107)	C	MER20	DNA/hAT-Charlie	(5)	214	4	4092599
384	22.1	14.4	0.9	chr9	76691142	76691255	(61703462)	C	MamRep488	DNA/hAT-Tip100	(39)	180	49	4093014
2289	17.0	9.2	9.5	chr9	77079563	77080237	(61314480)	C	LTR8A	LTR/ERV1	(54)	673	1	4093703
36	28.8	4.7	2.5	chr9	78031679	78031871	(60362846)	+	(GCCCCC)n	Simple_repeat	1	202	(0)	4095147
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
24	21.3	2.5	3.6	chr9	78032030	78032043	(60362674)	+	G-rich	Low_complexity	3	83	(0)	4095149
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
13	19.5	0.0	2.7	chr9	79572840	79572876	(58821841)	+	G-rich	Low_complexity	1	37	(0)	4097448
5065	10.9	2.8	2.3	chr9	79911600	79912375	(58482342)	C	LTR17	LTR/ERV1	(0)	780	1	4097914
620	29.1	4.9	6.5	chr9	79912376	79912613	(58482104)	C	MLT1I	LTR/ERVL-MaLR	(146)	265	19	4097913
8491	13.4	7.4	4.4	chr9	81062536	81064065	(57330652)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	4099360
4640	20.3	7.2	3.8	chr9	81981144	81981581	(56413136)	C	L1MD1	LINE/L1	(14)	6320	5919	4100861
13	19.5	0.0	2.7	chr9	82063883	82063919	(56330798)	+	(CCTCCCA)n	Simple_repeat	1	37	(0)	4100975
11062	9.5	2.5	1.1	chr9	82346028	82347113	(56047604)	+	THE1B-int	LTR/ERVL-MaLR	473	1580	(0)	4101370
2076	15.9	5.2	1.2	chr9	82722061	82722468	(55672249)	C	MSTB1	LTR/ERVL-MaLR	(7)	425	1	4101833
341	15.8	3.8	0.0	chr9	82722469	82722563	(55672154)	+	Charlie5	DNA/hAT-Charlie	38	186	(23)	4101834
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
15	5.6	0.0	0.0	chr9	83372371	83372389	(55022328)	+	(A)n	Simple_repeat	1	19	(0)	4102778
16	23.3	1.3	7.7	chr9	83622940	83623016	(54771701)	+	G-rich	Low_complexity	1	78	(0)	4103205
180	18.2	0.0	0.0	chr9	83623330	83623362	(54771355)	C	MIR3	SINE/MIR	(60)	148	116	4103206
29	0.0	0.0	0.0	chr9	83817838	83817864	(54576853)	+	(GGGGCG)n	Simple_repeat	1	27	(0)	4103550
1916	26.0	8.2	0.7	chr9	84165323	84166019	(54228698)	+	L1M5	LINE/L1	3707	4460	(1686)	4104174
2293	8.8	0.0	6.7	chr9	84166249	84166576	(54228141)	C	AluSq2	SINE/Alu	(7)	306	1	4104175
2154	10.4	0.7	0.0	chr9	84295304	84295583	(54099134)	+	AluSx	SINE/Alu	2	283	(29)	4104406
34	0.0	2.5	2.4	chr9	84295587	84295626	(54099091)	+	(AAAC)n	Simple_repeat	1	41	(0)	4104407
6019	10.1	4.1	39.0	chr9	84525761	84528257	(53866460)	C	SVA_A	Retroposon/SVA	(0)	1387	20	4104870
1973	29.1	12.3	4.8	chr9	84840360	84841879	(53552838)	+	L2a	LINE/L2	1499	3426	(0)	4105334
11707	9.7	1.5	0.5	chr9	85288866	85289981	(53104736)	+	LTR12C	LTR/ERV1	3	1120	(459)	4105995
35	0.0	2.7	0.0	chr9	85289982	85290018	(53104699)	+	(GGGGGTGGG)n	Simple_repeat	1	38	(0)	4105996
11707	9.7	1.5	0.5	chr9	85290019	85290463	(53104254)	+	LTR12C	LTR/ERV1	1121	1579	(0)	4105995
14	18.5	0.0	0.0	chr9	85941188	85941218	(52453499)	+	(GGC)n	Simple_repeat	1	31	(0)	4107037
18	18.9	1.1	10.1	chr9	86099514	86099601	(52295116)	+	(GCGCCCA)n	Simple_repeat	1	89	(0)	4107302
71	0.0	0.0	0.0	chr9	87432959	87433021	(50961696)	+	(GGAA)n	Simple_repeat	1	63	(0)	4109474
30	9.0	2.9	5.7	chr9	87433025	87433092	(50961625)	+	GA-rich	Low_complexity	1	70	(0)	4109475
37	7.7	1.8	0.0	chr9	87433092	87433147	(50961570)	+	(GGAGG)n	Simple_repeat	1	57	(0)	4109476
14	20.6	0.0	8.5	chr9	88388989	88389047	(50005670)	+	G-rich	Low_complexity	1	59	(0)	4111079
281	35.5	1.0	0.0	chr9	89423565	89423695	(48971022)	+	MIR	SINE/MIR	5	137	(131)	4112486
1752	17.8	1.0	0.0	chr9	89462664	89462949	(48931768)	+	AluJr	SINE/Alu	2	290	(22)	4112523
1124	24.3	4.7	3.5	chr9	89462974	89463288	(48931429)	C	L1MD2	LINE/L1	(6125)	422	104	4112524
19	23.6	1.2	7.0	chr9	89497856	89497940	(48896777)	+	(CCGC)n	Simple_repeat	1	86	(0)	4112562
47	17.6	4.8	4.0	chr9	89497978	89498122	(48896595)	+	(GGC)n	Simple_repeat	1	152	(0)	4112563
26	25.9	7.2	4.2	chr9	89498148	89498327	(48896390)	+	(CCTT)n	Simple_repeat	1	193	(0)	4112564
1306	24.0	7.1	0.5	chr9	91041954	91042346	(47352371)	C	L1MC4a	LINE/L1	(3)	7879	7459	4114611
740	22.1	7.0	6.2	chr9	91042351	91042591	(47352126)	+	MER96B	DNA/hAT-Tip100	168	410	(7)	4114612
2013	14.2	0.0	0.0	chr9	91132328	91132601	(47262116)	+	AluSz6	SINE/Alu	2	275	(37)	4114745
82	17.3	4.5	4.7	chr9	91132607	91132628	(47262089)	+	GA-rich	Low_complexity	1	26	(229)	4114746
17	24.6	0.0	0.0	chr9	91132629	91132664	(47262053)	+	G-rich	Low_complexity	1	36	(0)	4114747
82	17.3	4.5	4.7	chr9	91132665	91132850	(47261867)	+	GA-rich	Low_complexity	27	255	(0)	4114746
15	13.4	3.0	0.0	chr9	91857716	91857748	(46536969)	+	(TCCCC)n	Simple_repeat	1	34	(0)	4115831
2742	5.9	0.0	0.0	chr9	91981754	91982077	(46412640)	+	LTR17	LTR/ERV1	1	324	(456)	4116027
2312	11.6	0.0	0.0	chr9	91982116	91982426	(46412291)	C	AluSz	SINE/Alu	(1)	311	1	4116028
696	29.9	12.5	5.8	chr9	92864107	92864553	(45530164)	+	MLT1J	LTR/ERVL-MaLR	1	481	(31)	4117329
240	26.1	12.5	1.1	chr9	92864650	92864792	(45529925)	+	L1MEf	LINE/L1	3490	3646	(3591)	4117321
237	29.6	2.7	0.0	chr9	93095351	93095421	(45299296)	+	MIRc	SINE/MIR	77	149	(119)	4117709
3321	13.2	10.2	5.4	chr9	93160252	93160395	(45234322)	+	L1MB7	LINE/L1	5110	5270	(876)	4117825
16	0.0	0.0	0.0	chr9	93576978	93576997	(44817720)	+	(GCC)n	Simple_repeat	1	20	(0)	4118330
18	15.8	0.0	4.3	chr9	93577136	93577181	(44817536)	+	G-rich	Low_complexity	1	46	(0)	4118331
13	5.3	0.0	0.0	chr9	93577824	93577843	(44816874)	+	(GGA)n	Simple_repeat	1	20	(0)	4118332
499	28.5	6.3	1.0	chr9	93906452	93906757	(44487960)	+	L1MC5a	LINE/L1	2397	2542	(235)	4118729
303	31.0	4.2	1.2	chr9	93906853	93907012	(44487705)	+	L1ME3G	LINE/L1	745	909	(15)	4118728
1604	18.9	17.2	0.3	chr9	93907028	93907366	(44487351)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4118730
18	15.0	2.1	4.1	chr9	95515932	95515979	(42878738)	+	(CTGCGG)n	Simple_repeat	1	49	(0)	4121313
12	21.6	0.0	4.9	chr9	95516226	95516266	(42878451)	+	G-rich	Low_complexity	1	41	(0)	4121314
564	28.2	7.7	1.1	chr9	95596351	95596647	(42798070)	C	MLT1G3	LTR/ERVL-MaLR	(314)	281	2	4121447
284	17.2	3.3	0.0	chr9	95729601	95729658	(42665059)	C	MER58A	DNA/hAT-Charlie	(1)	223	164	4121645
40	0.0	0.0	0.0	chr9	95772302	95772335	(42622382)	+	(AC)n	Simple_repeat	1	34	(0)	4121721
17	20.6	4.0	0.0	chr9	96218264	96218313	(42176404)	+	G-rich	Low_complexity	1	52	(0)	4122423
270	24.1	14.9	3.0	chr9	96218478	96218588	(42176129)	+	MIRc	SINE/MIR	60	178	(52)	4122424
4037	16.5	8.6	1.1	chr9	96735759	96736175	(41658542)	C	L1MB3	LINE/L1	(569)	5614	5171	4123415
90	18.2	0.0	1.1	chr9	96736183	96736360	(41658357)	+	(TCCCC)n	Simple_repeat	1	178	(0)	4123419
1023	18.1	0.0	0.0	chr9	96736365	96736519	(41658198)	C	FAM	SINE/Alu	(30)	155	1	4123420
845	18.0	1.6	0.5	chr9	96736522	96736711	(41658006)	C	L1MB3	LINE/L1	(981)	5165	4974	4123415
2147	11.7	0.3	0.3	chr9	96795185	96795502	(41599215)	C	THE1C	LTR/ERVL-MaLR	(0)	375	58	4123500
1023	16.9	1.1	1.1	chr9	96795496	96795675	(41599042)	C	MSTB	LTR/ERVL-MaLR	(216)	210	31	4123501
21	15.9	0.0	0.0	chr9	96795682	96795731	(41598986)	+	(T)n	Simple_repeat	1	50	(0)	4123502
319	26.4	21.4	3.5	chr9	98634856	98635083	(39759634)	C	L3	LINE/CR1	(110)	3989	3710	4126905
35	4.6	2.2	0.0	chr9	99820032	99820076	(38574641)	+	(CCCCG)n	Simple_repeat	1	46	(0)	4129130
3088	13.8	7.9	3.0	chr9	101327266	101328344	(37066373)	C	MER11A	LTR/ERVK	(0)	1236	1	4131515
128	12.3	0.7	6.9	chr9	101342366	101342653	(37052064)	+	G-rich	Low_complexity	1	290	(0)	4131542
409	23.9	10.3	0.0	chr9	101342741	101342853	(37051864)	+	MLT1O	LTR/ERVL-MaLR	405	530	(12)	4131540
7204	7.6	12.9	3.7	chr9	101384859	101386000	(37008717)	C	MER11A	LTR/ERVK	(3)	1263	1	4131613
6348	9.6	17.6	0.7	chr9	102712549	102713598	(35681119)	+	MER11A	LTR/ERVK	1	1266	(0)	4133426
1964	30.8	1.2	3.0	chr9	102713599	102713759	(35680958)	+	HERVL40-int	LTR/ERVL	2483	2639	(2891)	4133425
279	24.6	3.0	0.0	chr9	102713762	102713826	(35680891)	C	LTR16D	LTR/ERVL	(32)	619	553	4133427
26	13.1	2.0	0.0	chr9	104094526	104094575	(34300142)	+	G-rich	Low_complexity	1	51	(0)	4135237
400	27.6	13.0	0.6	chr9	104094863	104095037	(34299680)	C	L2a	LINE/L2	(184)	3242	3043	4135238
3158	26.3	16.2	2.6	chr9	104774841	104776373	(33618344)	+	L2a	LINE/L2	1419	3206	(220)	4136237
27	13.1	0.0	0.0	chr9	104926447	104926488	(33468229)	+	(A)n	Simple_repeat	1	42	(0)	4136496
15	21.3	8.3	0.0	chr9	104926641	104926700	(33468017)	+	(CCAGC)n	Simple_repeat	1	65	(0)	4136497
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
15	22.3	4.4	4.2	chr9	105244915	105244982	(33149735)	+	(CCCG)n	Simple_repeat	1	71	(0)	4137224
2007	19.5	6.8	5.7	chr9	105784042	105784185	(32610532)	C	L1PA16	LINE/L1	(697)	5469	5325	4138039
2193	12.2	0.0	2.7	chr9	105784207	105784502	(32610215)	C	AluSz6	SINE/Alu	(16)	296	9	4138041
247	33.8	12.4	2.6	chr9	106889375	106889605	(31505112)	C	MamRTE1	LINE/RTE-BovB	(9)	3803	3547	4139720
2343	6.8	0.0	0.4	chr9	107634210	107634488	(30760229)	+	AluSx4	SINE/Alu	1	278	(32)	4141225
3612	19.6	3.3	0.6	chr9	108885604	108886256	(29508461)	C	MER76	LTR/ERVL	(16)	675	5	4143451
2094	20.8	6.9	10.1	chr9	108886259	108886670	(29508047)	+	L1MD	LINE/L1	3574	3994	(2152)	4143452
12	18.4	5.4	0.0	chr9	108933745	108933781	(29460936)	+	(GCAGCCC)n	Simple_repeat	1	39	(0)	4143525
16	9.3	0.0	0.0	chr9	108934333	108934355	(29460362)	+	(G)n	Simple_repeat	1	23	(0)	4143526
17	26.9	0.0	3.2	chr9	111038222	111038283	(27356434)	+	(CCCCGCC)n	Simple_repeat	1	62	(0)	4147192
13	16.9	11.3	0.0	chr9	111038362	111038414	(27356303)	+	(GGCTCCGC)n	Simple_repeat	1	59	(0)	4147193
5293	7.7	2.7	1.7	chr9	111567803	111568829	(26825888)	+	MER11A	LTR/ERVK	1	1266	(0)	4148122
2640	24.5	11.1	1.8	chr9	111568840	111569495	(26825222)	C	L2a	LINE/L2	(702)	2717	1964	4148119
3837	16.6	7.4	5.8	chr9	111870273	111871099	(26523618)	+	MER21B	LTR/ERVL	1	841	(27)	4148701
1306	20.1	1.7	0.0	chr9	111871121	111871349	(26523368)	+	MLT1A0	LTR/ERVL-MaLR	133	365	(0)	4148700
227	22.6	2.3	11.6	chr9	111944306	111944400	(26450317)	C	L1PBa	LINE/L1	(4565)	2298	2213	4148846
191	20.6	0.0	0.0	chr9	111944412	111944445	(26450272)	C	MER5A	DNA/hAT-Charlie	(4)	185	152	4148847
13	18.9	4.5	2.2	chr9	112333142	112333185	(26061532)	+	(CCGCGGA)n	Simple_repeat	1	46	(0)	4149606
35	24.5	3.9	2.2	chr9	112333644	112333773	(26060944)	+	(CGCCCC)n	Simple_repeat	1	135	(0)	4149607
27312	7.8	0.6	1.1	chr9	112392991	112399089	(25995628)	C	HERVK11-int	LTR/ERVK	(0)	7953	1	4149752
4663	7.5	2.7	1.6	chr9	112399090	112400106	(25994611)	C	MER11A	LTR/ERVK	(0)	1266	1	4149752
24	18.9	4.4	1.4	chr9	112750624	112750691	(25644026)	+	(CCTC)n	Simple_repeat	1	71	(0)	4150443
262	30.7	7.3	2.6	chr9	113221781	113221897	(25172820)	+	MIR1_Amn	SINE/MIR	20	142	(88)	4151224
299	23.8	34.5	2.4	chr9	113349046	113349217	(25045500)	C	MIR	SINE/MIR	(11)	251	23	4151478
315	26.2	1.2	0.0	chr9	113349250	113349329	(25045388)	+	MIRb	SINE/MIR	172	252	(16)	4151479
189	12.9	3.1	0.0	chr9	113349303	113349333	(25045384)	+	L2c	LINE/L2	3341	3372	(15)	4151472
26	6.6	1.9	5.6	chr9	113349586	113349638	(25045079)	+	(GCCGGG)n	Simple_repeat	1	54	(0)	4151480
2226	6.6	1.3	6.3	chr9	113376347	113376664	(25018053)	C	AluSg	SINE/Alu	(7)	303	2	4151545
16	30.6	0.0	5.8	chr9	113377041	113377126	(25017591)	+	(CCCGC)n	Simple_repeat	1	86	(0)	4151546
12	22.6	4.2	2.0	chr9	114154202	114154249	(24240468)	+	(CGCGCC)n	Simple_repeat	1	50	(0)	4153070
16	16.5	6.1	1.9	chr9	114155964	114156012	(24238705)	+	(CGG)n	Simple_repeat	1	52	(0)	4153075
17	18.3	3.3	4.8	chr9	114156267	114156327	(24238390)	+	G-rich	Low_complexity	1	63	(0)	4153076
1041	10.6	0.0	0.7	chr9	114962412	114962554	(23432163)	C	AluSx	SINE/Alu	(17)	295	154	4154759
4342	8.5	3.1	1.6	chr9	114962556	114963558	(23431159)	C	MER11A	LTR/ERVK	(0)	1266	4	4154760
2133	13.0	3.0	13.7	chr9	117515627	117516107	(20878610)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4159590
1019	26.6	10.3	0.6	chr9	120255788	120256120	(18138597)	C	LTR16	LTR/ERVL	(2)	436	68	4164679
184	25.0	4.0	5.0	chr9	121264607	121264707	(17130010)	+	L2c	LINE/L2	3022	3121	(266)	4166627
475	26.4	3.7	5.2	chr9	121264735	121264870	(17129847)	+	MLT1O	LTR/ERVL-MaLR	22	155	(387)	4166628
446	32.0	3.9	5.0	chr9	121369181	121369361	(17025356)	+	MamTip2	DNA/hAT-Tip100	2	180	(125)	4166862
1540	11.8	0.9	5.8	chr9	121649891	121650132	(16744585)	+	MER30	DNA/hAT-Charlie	1	230	(0)	4167461
377	25.9	9.4	0.8	chr9	121703505	121703621	(16691096)	+	MIRb	SINE/MIR	96	223	(45)	4167581
252	34.3	13.9	0.5	chr9	122213177	122213381	(16181336)	+	L2a	LINE/L2	3187	3423	(3)	4168564
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
26	30.0	0.0	0.0	chr9	123268528	123268608	(15126109)	+	(GCG)n	Simple_repeat	1	81	(0)	4170359
346	31.6	9.2	3.8	chr9	123644041	123644224	(14750493)	+	MIRb	SINE/MIR	49	243	(25)	4171069
16	0.0	0.0	0.0	chr9	123644379	123644395	(14750322)	+	(A)n	Simple_repeat	1	17	(0)	4171070
382	29.0	1.5	3.0	chr9	123644396	123644530	(14750187)	+	MARNA	DNA/TcMar-Mariner	207	339	(247)	4171071
17	10.0	3.1	0.0	chr9	124017531	124017581	(14377136)	+	(GTGTGC)n	Simple_repeat	1	52	(0)	4171708
876	17.6	0.0	0.6	chr9	124089517	124089676	(14305041)	+	MER5B	DNA/hAT-Charlie	20	178	(0)	4171887
2280	12.3	0.7	0.0	chr9	124089788	124090096	(14304621)	C	AluSz	SINE/Alu	(1)	311	1	4171888
544	24.4	3.0	2.2	chr9	124591256	124591405	(13803312)	C	MIRb	SINE/MIR	(40)	228	72	4172878
260	31.1	2.9	3.6	chr9	124868723	124868859	(13525858)	+	L2b	LINE/L2	3071	3206	(169)	4173428
16	15.3	0.0	5.0	chr9	124869136	124869175	(13525542)	+	(GGC)n	Simple_repeat	1	40	(0)	4173429
19	13.2	4.5	7.1	chr9	124869211	124869277	(13525440)	+	(GAGCG)n	Simple_repeat	1	70	(0)	4173430
17	8.2	0.0	0.0	chr9	124869371	124869396	(13525321)	+	(GGC)n	Simple_repeat	1	26	(0)	4173431
12	19.4	4.7	2.2	chr9	125889858	125889900	(12504817)	+	(GCCC)n	Simple_repeat	1	45	(0)	4175489
2283	11.9	0.7	0.0	chr9	125980611	125980920	(12413797)	+	AluSx1	SINE/Alu	1	312	(0)	4175608
2785	16.7	1.2	1.8	chr9	125980921	125981384	(12413333)	C	L1MC1	LINE/L1	(6040)	468	1	4175604
21	30.9	1.5	5.9	chr9	126157241	126157374	(12237343)	+	(TCTT)n	Simple_repeat	1	136	(0)	4175953
1966	24.8	3.1	4.6	chr9	126191535	126192097	(12202620)	+	MLT2B3	LTR/ERVL	1	554	(0)	4176020
1177	29.3	9.8	2.8	chr9	126218805	126219801	(12174916)	+	L2	LINE/L2	1929	3002	(417)	4176066
234	34.4	6.8	0.0	chr9	126514684	126514828	(11879889)	+	MIR	SINE/MIR	42	188	(42)	4176494
411	33.0	2.6	0.5	chr9	126705563	126705751	(11688966)	C	MIRb	SINE/MIR	(26)	242	50	4176869
31	9.2	0.0	0.0	chr9	126748271	126748317	(11646400)	+	(CCCTC)n	Simple_repeat	1	47	(0)	4176948
17	19.0	2.4	0.0	chr9	126781890	126781931	(11612786)	+	G-rich	Low_complexity	1	43	(0)	4177042
29	29.4	0.9	2.6	chr9	126860601	126860713	(11534004)	+	G-rich	Low_complexity	1	114	(0)	4177201
29	0.0	5.7	0.0	chr9	126860784	126860818	(11533899)	+	(GGCGGGGCA)n	Simple_repeat	1	37	(0)	4177202
609	27.6	9.3	0.5	chr9	127245668	127245882	(11148835)	C	MIRb	SINE/MIR	(7)	261	26	4177864
508	29.2	11.5	8.9	chr9	127522530	127523072	(10871645)	+	L2a	LINE/L2	2882	3426	(0)	4178399
31	27.1	1.4	5.6	chr9	127785379	127785520	(10609197)	+	(GGC)n	Simple_repeat	1	144	(0)	4179013
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
12	17.7	3.1	0.0	chr9	127897472	127897503	(10497214)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	4179277
183	35.1	1.8	4.3	chr9	127897588	127897703	(10497014)	C	MIR3	SINE/MIR	(48)	160	48	4179278
27	11.0	0.0	3.8	chr9	127899435	127899487	(10495230)	+	(CGCCCC)n	Simple_repeat	1	53	(0)	4179283
284	24.4	9.7	2.3	chr9	127943439	127943590	(10451127)	C	MIRb	SINE/MIR	(41)	227	64	4179383
2045	9.5	1.4	2.4	chr9	128054994	128055288	(10339429)	+	AluSx	SINE/Alu	1	292	(20)	4179675
49	16.9	2.5	3.3	chr9	128055293	128055411	(10339306)	+	G-rich	Low_complexity	1	122	(0)	4179676
2335	10.7	0.0	0.0	chr9	128192531	128192840	(10201877)	C	AluSz	SINE/Alu	(0)	312	3	4179940
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
15	8.9	0.0	0.0	chr9	128689232	128689255	(9705462)	+	(AGG)n	Simple_repeat	1	24	(0)	4181103
17	9.7	2.9	2.8	chr9	128689312	128689346	(9705371)	+	(GCC)n	Simple_repeat	1	36	(0)	4181104
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
16	17.8	4.3	2.0	chr9	128689519	128689524	(9705193)	+	(CCCTCC)n	Simple_repeat	1	13	(36)	4181107
13	12.5	0.0	3.5	chr9	128689525	128689553	(9705164)	+	(CCCTT)n	Simple_repeat	1	29	(0)	4181108
16	17.8	4.3	2.0	chr9	128689554	128689565	(9705152)	+	(CCCTCC)n	Simple_repeat	14	49	(0)	4181107
12	18.5	0.0	7.1	chr9	128703050	128703091	(9691626)	+	(CCCTG)n	Simple_repeat	1	42	(0)	4181128
205	34.7	1.3	0.0	chr9	128724491	128724565	(9670152)	C	MIRb	SINE/MIR	(101)	167	92	4181166
11	20.8	0.0	2.9	chr9	129112091	129112125	(9282592)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	4182106
17	26.0	3.8	4.8	chr9	129351965	129352045	(9042672)	+	(TC)n	Simple_repeat	1	80	(0)	4182622
19	11.1	3.6	6.9	chr9	129413351	129413410	(8981307)	+	(GCCGCCC)n	Simple_repeat	1	58	(0)	4182762
28	26.2	4.3	2.5	chr9	129436938	129437077	(8957640)	+	(GCGTGT)n	Simple_repeat	1	142	(0)	4182819
15	8.1	0.0	3.6	chr9	129437271	129437298	(8957419)	+	(GGAG)n	Simple_repeat	1	28	(0)	4182820
315	27.6	1.5	5.3	chr9	129481886	129482012	(8912705)	C	MIRb	SINE/MIR	(126)	142	13	4182933
15	19.1	0.0	2.6	chr9	129482062	129482099	(8912618)	+	GA-rich	Low_complexity	1	38	(0)	4182934
23	10.2	0.0	4.3	chr9	129482661	129482735	(8911982)	+	(GGAGGGG)n	Simple_repeat	1	71	(0)	4182935
473	27.1	1.3	6.1	chr9	129696898	129697062	(8697655)	+	MIR	SINE/MIR	23	179	(83)	4183421
11	20.8	0.0	2.9	chr9	129697316	129697350	(8697367)	+	(TCCCCC)n	Simple_repeat	1	35	(0)	4183422
19	20.2	7.6	4.4	chr9	129697497	129697601	(8697116)	+	(TGGCGCGC)n	Simple_repeat	1	113	(0)	4183423
12	29.6	0.0	2.0	chr9	130042848	130042898	(8351819)	+	(CGCCCC)n	Simple_repeat	1	51	(0)	4184176
16	15.4	2.8	0.0	chr9	130043221	130043256	(8351461)	+	GA-rich	Low_complexity	1	37	(0)	4184177
15	23.6	5.5	0.0	chr9	130043273	130043342	(8351375)	+	(CGCCCC)n	Simple_repeat	1	73	(0)	4184178
31	26.8	0.8	4.1	chr9	130172734	130172856	(8221861)	+	(CCCCGC)n	Simple_repeat	1	118	(0)	4184472
39	0.0	0.0	0.0	chr9	130681606	130681641	(7713076)	+	(CGC)n	Simple_repeat	1	36	(0)	4185575
2248	8.5	1.3	0.3	chr9	131358251	131358556	(7036161)	+	AluSx	SINE/Alu	1	309	(3)	4186905
3231	15.3	7.8	0.3	chr9	131358557	131359061	(7035656)	C	LTR9D	LTR/ERV1	(100)	545	2	4186904
14	14.9	5.4	0.0	chr9	131393728	131393764	(7000953)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	4187011
13	18.8	4.5	2.2	chr9	131393757	131393800	(7000917)	+	(CCTGGCT)n	Simple_repeat	1	46	(0)	4187012
33	16.2	14.3	1.1	chr9	131394000	131394160	(7000557)	+	(GCGA)n	Simple_repeat	1	184	(0)	4187013
16	18.4	3.3	9.7	chr9	131394159	131394248	(7000469)	+	(GCCCC)n	Simple_repeat	1	93	(0)	4187014
15	4.1	0.0	6.9	chr9	132161956	132161984	(6232733)	+	(CGGG)n	Simple_repeat	1	29	(0)	4188351
21	13.4	2.4	0.0	chr9	132162065	132162105	(6232612)	+	(CGG)n	Simple_repeat	1	42	(0)	4188352
11	24.0	2.6	0.0	chr9	132162116	132162154	(6232563)	+	(GCGCCCC)n	Simple_repeat	1	40	(0)	4188353
498	28.6	5.3	5.9	chr9	132768583	132768905	(5625812)	+	L1MC4a	LINE/L1	5609	5929	(1953)	4189474
388	26.3	10.3	2.8	chr9	132769165	132769344	(5625373)	+	MIR3	SINE/MIR	2	196	(12)	4189475
1666	12.8	6.0	0.4	chr9	132819919	132820169	(5574548)	+	AluJr	SINE/Alu	43	308	(4)	4189551
20	3.7	0.0	0.0	chr9	132820171	132820198	(5574519)	+	(GGAA)n	Simple_repeat	1	28	(0)	4189552
477	34.3	9.1	2.8	chr9	132820210	132820527	(5574190)	C	L1ME4a	LINE/L1	(63)	6061	5722	4189553
272	32.1	4.8	1.4	chr9	132820539	132820680	(5574037)	C	L1ME4a	LINE/L1	(439)	5685	5539	4189553
12	14.9	8.1	0.0	chr9	133274739	133274775	(5119942)	+	G-rich	Low_complexity	1	40	(0)	4190337
225	27.5	10.5	3.8	chr9	133322502	133322607	(5072110)	+	L2c	LINE/L2	3054	3167	(220)	4190406
1119	17.5	4.9	0.4	chr9	133322837	133323088	(5071629)	+	MER74A	LTR/ERVL	268	531	(27)	4190407
14	20.9	3.2	6.2	chr9	133991591	133991653	(4403064)	+	(CCGCG)n	Simple_repeat	1	65	(0)	4191370
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
224	36.0	5.7	4.8	chr9	134434665	134434769	(3959948)	+	L2c	LINE/L2	3272	3377	(10)	4192014
202	18.1	5.2	2.0	chr9	134444306	134444828	(3949889)	+	(CTCC)n	Simple_repeat	1	550	(0)	4192018
1209	13.1	0.0	0.0	chr9	134444829	134444996	(3949721)	+	AluSx1	SINE/Alu	145	312	(0)	4192019
274	0.0	0.0	0.0	chr9	134445014	134445051	(3949666)	+	MSTA-int	LTR/ERVL-MaLR	1588	1625	(6)	4192020
1714	12.5	16.8	0.6	chr9	134445050	134445402	(3949315)	+	MSTA	LTR/ERVL-MaLR	7	428	(0)	4192020
27	16.7	2.6	5.1	chr9	134523361	134523436	(3871281)	+	(CTC)n	Simple_repeat	1	78	(0)	4192123
47	2.1	0.0	0.0	chr9	134523571	134523618	(3871099)	+	(CATCCCCTCC)n	Simple_repeat	1	48	(0)	4192124
17	7.9	0.0	0.0	chr9	134523730	134523756	(3870961)	+	(CCATC)n	Simple_repeat	1	27	(0)	4192125
1706	20.4	6.0	2.1	chr9	134988649	134989034	(3405683)	C	MSTA	LTR/ERVL-MaLR	(4)	424	23	4192629
19	21.4	1.4	5.7	chr9	135479527	135479621	(2915096)	+	G-rich	Low_complexity	1	90	(0)	4193296
16	18.9	0.0	0.0	chr9	135479760	135479789	(2914928)	+	(C)n	Simple_repeat	1	30	(0)	4193297
16	18.6	1.9	5.5	chr9	135479790	135479811	(2914906)	+	(CGCCC)n	Simple_repeat	3	55	(0)	4193298
489	26.8	15.1	2.3	chr9	135666132	135666538	(2728179)	C	MLT1D	LTR/ERVL-MaLR	(0)	467	1	4193512
14	12.3	0.0	9.3	chr9	136193780	136193822	(2200895)	+	G-rich	Low_complexity	1	43	(0)	4194142
20	20.9	3.9	3.8	chr9	136327353	136327429	(2067288)	+	(CCCCCGC)n	Simple_repeat	1	80	(0)	4194271
13	26.9	2.2	0.0	chr9	136327481	136327525	(2067192)	+	(GGC)n	Simple_repeat	1	46	(0)	4194272
30	0.0	0.0	0.0	chr9	136327771	136327798	(2066919)	+	(GGGCCG)n	Simple_repeat	1	28	(0)	4194273
27	0.0	6.1	0.0	chr9	136545985	136546017	(1848700)	+	(CGCGCCC)n	Simple_repeat	1	35	(0)	4194481
17	16.3	3.2	6.2	chr9	136848621	136848682	(1546035)	+	(CCCCGCG)n	Simple_repeat	1	64	(0)	4194874
15	28.2	1.1	6.5	chr9	136848951	136849042	(1545675)	+	G-rich	Low_complexity	1	93	(0)	4194875
23	29.3	0.0	2.3	chr9	136944599	136944684	(1450033)	+	(CCGCCC)n	Simple_repeat	1	86	(0)	4195031
26	24.0	1.3	1.3	chr9	137046064	137046138	(1348579)	+	GA-rich	Low_complexity	1	76	(0)	4195148
193	23.5	0.0	5.6	chr9	137113691	137113744	(1280973)	C	L2b	LINE/L2	(211)	3164	3114	4195238
13	32.8	1.6	0.0	chr9	137113783	137113846	(1280871)	+	G-rich	Low_complexity	1	65	(0)	4195239
2100	10.5	0.3	3.0	chr9	137130678	137130982	(1263735)	+	AluSx1	SINE/Alu	16	312	(0)	4195271
11	22.4	3.5	5.1	chr9	137295468	137295524	(1099193)	+	(AGTGCGG)n	Simple_repeat	1	59	(0)	4195472
16	5.6	10.8	0.0	chr9	137295862	137295898	(1098819)	+	(CCCTCGG)n	Simple_repeat	1	41	(0)	4195473
227	31.0	5.7	0.0	chr9	137422439	137422538	(972179)	+	LTR56	LTR/ERV1	222	327	(118)	4195624
334	26.0	0.0	0.0	chr9	137422578	137422654	(972063)	+	LTR24B	LTR/ERV1	493	569	(7)	4195625
15	20.4	0.0	10.5	chrX	2829171	2829246	(153211649)	+	G-rich	Low_complexity	1	76	(0)	4363651
2376	10.8	3.3	2.2	chrX	8024972	8025331	(148015564)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4372538
30	23.9	3.9	1.9	chrX	9465124	9465225	(146575670)	+	(CCG)n	Simple_repeat	1	106	(0)	4374851
1828	15.3	1.7	1.7	chrX	9820378	9820664	(146220231)	C	AluJr	SINE/Alu	(25)	287	1	4375416
756	17.1	19.4	5.4	chrX	10118564	10118748	(145922147)	+	MER20	DNA/hAT-Charlie	2	218	(1)	4375955
406	30.6	6.4	1.1	chrX	10118805	10118982	(145921913)	+	MIRc	SINE/MIR	2	195	(13)	4375956
73	11.5	0.0	0.0	chrX	10175856	10175971	(145864924)	+	(CT)n	Simple_repeat	1	116	(0)	4376068
16	5.3	0.0	0.0	chrX	10175972	10175991	(145864904)	+	(GT)n	Simple_repeat	1	20	(0)	4376069
2641	16.1	8.3	5.5	chrX	10633740	10633876	(145407019)	+	MER34A	LTR/ERV1	453	567	(4)	4376778
20	12.2	0.0	7.7	chrX	11758385	11758436	(144282459)	+	G-rich	Low_complexity	1	52	(0)	4378538
17	4.9	0.0	0.0	chrX	13837708	13837728	(142203167)	+	(G)n	Simple_repeat	1	21	(0)	4381813
514	29.9	1.0	7.4	chrX	15493614	15493830	(140547065)	+	MIR	SINE/MIR	35	237	(25)	4384469
2277	8.5	0.4	0.0	chrX	16599451	16599774	(139441121)	C	AluSp	SINE/Alu	(0)	313	2	4386287
2131	11.4	2.4	0.0	chrX	16599785	16600073	(139440822)	C	AluSz6	SINE/Alu	(16)	296	1	4386288
2800	14.4	1.9	7.2	chrX	17508043	17508460	(138532435)	C	L1MB5	LINE/L1	(8)	6166	5777	4387973
12	12.0	3.7	0.0	chrX	19373099	19373125	(136667770)	+	(AGGTG)n	Simple_repeat	1	28	(0)	4391238
26890	4.7	0.4	0.0	chrX	19417066	19423189	(136617706)	+	L1PA4	LINE/L1	8	6155	(0)	4391321
672	22.3	1.9	0.6	chrX	19423205	19423362	(136617533)	C	L1MD1	LINE/L1	(117)	6125	5966	4391320
2773	18.7	3.9	5.6	chrX	20044825	20045288	(135995607)	+	MER68	LTR/ERVL	1	483	(80)	4392439
1741	14.4	0.4	0.4	chrX	20045289	20045552	(135995343)	+	AluJb	SINE/Alu	45	308	(4)	4392440
2586	7.2	0.0	1.0	chrX	20142197	20142502	(135898393)	C	AluSg	SINE/Alu	(7)	303	1	4392632
11095	12.2	1.9	0.1	chrX	20541613	20543212	(135497683)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	4393340
4835	7.7	2.9	1.3	chrX	21807951	21808962	(134231933)	C	MER11A	LTR/ERVK	(0)	1266	1	4394956
2357	9.1	0.3	1.3	chrX	23806891	23807199	(132233696)	+	AluSx1	SINE/Alu	1	306	(6)	4398128
11	20.6	5.1	0.0	chrX	24150109	24150147	(131890748)	+	(AGGCCGA)n	Simple_repeat	1	41	(0)	4398943
23	20.0	4.2	2.7	chrX	24150334	24150405	(131890490)	+	(GGC)n	Simple_repeat	1	75	(0)	4398944
17	16.8	2.5	0.0	chrX	24465283	24465322	(131575573)	+	(GCTGCT)n	Simple_repeat	1	41	(0)	4399580
14	19.3	2.3	2.3	chrX	24647187	24647229	(131393666)	+	(TCTCCCC)n	Simple_repeat	1	44	(0)	4399907
12	23.6	8.3	0.0	chrX	24647230	24647245	(131393650)	+	(TTCTCCCC)n	Simple_repeat	2	65	(0)	4399908
17	0.0	0.0	0.0	chrX	24647275	24647293	(131393602)	+	(CT)n	Simple_repeat	1	19	(0)	4399909
8219	17.5	9.5	3.2	chrX	30147957	30148991	(125891904)	+	MER52A	LTR/ERV1	1	1163	(592)	4407780
6210	9.6	16.4	3.6	chrX	30148992	30150090	(125890805)	C	MER11A	LTR/ERVK	(0)	1266	1	4407781
2160	14.0	10.2	0.2	chrX	31190141	31190555	(124850340)	C	MER65D	LTR/ERV1	(0)	473	13	4409392
261	2.8	0.0	0.0	chrX	31190562	31190597	(124850298)	+	MER20	DNA/hAT-Charlie	56	91	(128)	4409393
17	9.1	0.0	0.0	chrX	31190598	31190621	(124850274)	+	(G)n	Simple_repeat	1	24	(0)	4409394
657	19.1	0.7	4.2	chrX	31190623	31190764	(124850131)	+	MER20	DNA/hAT-Charlie	83	219	(0)	4409395
458	13.2	0.0	2.1	chrX	31190765	31190857	(124850038)	C	L1MD3	LINE/L1	(96)	7899	7809	4409396
774	31.4	5.6	0.3	chrX	31190862	31191180	(124849715)	+	Helitron3Na_Mam	RC/Helitron	150	486	(0)	4409390
15	0.0	0.0	0.0	chrX	31266912	31266930	(124773965)	+	(CGC)n	Simple_repeat	1	19	(0)	4409508
13	28.4	3.3	1.6	chrX	31266961	31267021	(124773874)	+	(GCCGG)n	Simple_repeat	1	63	(0)	4409509
32	4.3	4.2	0.0	chrX	31267089	31267136	(124773759)	+	(GAAA)n	Simple_repeat	1	50	(0)	4409510
2361	7.5	1.8	0.0	chrX	31563079	31563359	(124477536)	C	AluSq2	SINE/Alu	(27)	286	1	4409997
650	29.7	12.0	7.0	chrX	31563360	31563495	(124477400)	C	L1ME4b	LINE/L1	(1311)	4835	4713	4409995
974	13.4	0.6	2.8	chrX	36433993	36434169	(119606726)	C	MER50	LTR/ERV1	(18)	716	544	4416383
537	20.2	0.0	3.1	chrX	36434321	36434448	(119606447)	C	MER50	LTR/ERV1	(177)	557	434	4416383
3529	17.9	9.1	2.8	chrX	36956449	36957374	(119083521)	+	L1MA9	LINE/L1	5275	6274	(38)	4417009
11	15.2	2.4	7.0	chrX	37350039	37350080	(118690815)	+	G-rich	Low_complexity	1	43	(0)	4417289
34	2.4	2.3	2.2	chrX	38220723	38220766	(117820129)	+	(GCA)n	Simple_repeat	1	45	(0)	4418617
15	26.6	0.0	4.7	chrX	38220910	38220973	(117819922)	+	(CCTCCTC)n	Simple_repeat	1	64	(0)	4418618
251	29.0	13.1	4.6	chrX	38221252	38221446	(117819449)	C	MIRb	SINE/MIR	(26)	242	29	4418619
283	33.6	0.7	4.7	chrX	38321231	38321380	(117719515)	C	MER5B	DNA/hAT-Charlie	(0)	178	35	4418761
1929	12.7	3.7	2.4	chrX	38321382	38321672	(117719223)	+	AluJb	SINE/Alu	1	295	(17)	4418762
400	34.4	5.0	0.0	chrX	39019725	39019902	(117020993)	C	MIR3	SINE/MIR	(24)	184	4	4419892
14	20.2	0.0	0.0	chrX	39688908	39688943	(116351952)	+	(CCCTC)n	Simple_repeat	1	36	(0)	4420983
15	6.6	0.0	10.3	chrX	39689180	39689218	(116351677)	+	(TCCCC)n	Simple_repeat	1	39	(0)	4420984
48	0.0	0.0	0.0	chrX	40014386	40014426	(116026469)	+	(GT)n	Simple_repeat	1	41	(0)	4421630
16	5.2	0.0	0.0	chrX	40014427	40014446	(116026449)	+	(CG)n	Simple_repeat	1	20	(0)	4421631
15	12.2	0.0	0.0	chrX	40097719	40097745	(115943150)	+	(TGTG)n	Simple_repeat	1	27	(0)	4421761
14	19.6	2.2	4.3	chrX	40097789	40097833	(115943062)	+	(CCG)n	Simple_repeat	1	46	(0)	4421762
38	15.1	2.4	2.3	chrX	40097986	40098134	(115942761)	+	(TCCC)n	Simple_repeat	1	149	(0)	4421763
18	28.0	1.5	1.5	chrX	40098423	40098488	(115942407)	+	(GGC)n	Simple_repeat	1	67	(0)	4421764
13	19.7	6.2	2.0	chrX	40105099	40105146	(115935749)	+	(GCG)n	Simple_repeat	1	51	(0)	4421770
17	4.0	3.9	0.0	chrX	40105325	40105350	(115935545)	+	(CGC)n	Simple_repeat	1	27	(0)	4421771
13	7.8	3.5	3.3	chrX	40146675	40146704	(115894191)	+	(CGCC)n	Simple_repeat	1	30	(0)	4421854
11	25.1	1.8	5.2	chrX	40153892	40153948	(115886947)	+	G-rich	Low_complexity	1	58	(0)	4421858
16	3.6	6.5	3.0	chrX	40154110	40154140	(115886755)	+	(AAT)n	Simple_repeat	1	33	(0)	4421859
18	17.9	0.0	4.2	chrX	40154221	40154268	(115886627)	+	(CTCCC)n	Simple_repeat	1	48	(0)	4421860
17	12.3	0.0	5.1	chrX	41335055	41335093	(114705802)	+	G-rich	Low_complexity	1	39	(0)	4424167
18	23.3	1.8	1.7	chrX	41923176	41923232	(114117663)	+	G-rich	Low_complexity	1	58	(0)	4425253
12	0.0	0.0	8.3	chrX	41923222	41923245	(114117650)	+	(GCCC)n	Simple_repeat	1	24	(0)	4425254
14	21.1	0.0	8.6	chrX	41923440	41923497	(114117398)	+	(GCG)n	Simple_repeat	1	58	(0)	4425255
301	26.0	9.9	2.0	chrX	42144524	42144625	(113896270)	+	MIRc	SINE/MIR	57	167	(101)	4425571
2170	9.2	0.0	4.1	chrX	44282322	44282615	(111758280)	+	AluSx	SINE/Alu	1	282	(30)	4428564
31	15.2	0.0	0.0	chrX	44282616	44282666	(111758229)	+	G-rich	Low_complexity	1	51	(0)	4428565
19	11.6	0.0	0.0	chrX	44282669	44282696	(111758199)	+	(A)n	Simple_repeat	1	28	(0)	4428566
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
2067	17.3	2.7	2.1	chrX	45261396	45261767	(110779128)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	4430561
5122	16.6	0.7	3.2	chrX	45545949	45546881	(110494014)	+	THE1D-int	LTR/ERVL-MaLR	719	1627	(4)	4430913
3916	17.0	0.9	2.5	chrX	45546870	45547481	(110493414)	C	MSTA-int	LTR/ERVL-MaLR	(908)	743	133	4430912
13	21.0	8.1	1.5	chrX	46912197	46912258	(109128637)	+	G-rich	Low_complexity	1	67	(0)	4433039
17	11.3	5.0	2.4	chrX	46912446	46912485	(109128410)	+	(CCG)n	Simple_repeat	1	42	(0)	4433040
235	26.5	11.7	0.0	chrX	47231727	47231794	(108809101)	C	L2b	LINE/L2	(38)	3337	3261	4433634
937	11.4	20.1	0.6	chrX	47231906	47232081	(108808814)	+	MER20	DNA/hAT-Charlie	1	219	(0)	4433635
19	21.3	1.9	1.9	chrX	47523359	47523410	(108517485)	+	GA-rich	Low_complexity	1	53	(0)	4434355
84	24.1	0.0	3.2	chrX	48177180	48177398	(107863497)	+	GA-rich	Low_complexity	1	219	(0)	4435499
43	21.8	1.7	2.5	chrX	48177453	48177568	(107863327)	+	GA-rich	Low_complexity	1	118	(0)	4435499
30	31.0	0.0	2.0	chrX	48336637	48336740	(107704155)	+	G-rich	Low_complexity	1	101	(0)	4435866
12	22.5	2.3	2.3	chrX	48696872	48696914	(107343981)	+	(GGCCCCG)n	Simple_repeat	1	44	(0)	4436656
14	23.8	2.0	1.9	chrX	49053966	49054016	(106986879)	+	(ACCCCTG)n	Simple_repeat	1	52	(0)	4437396
2458	8.1	0.3	0.0	chrX	49123933	49124241	(106916654)	C	AluSc8	SINE/Alu	(0)	311	2	4437547
24720	16.2	0.6	2.5	chrX	49139967	49144004	(106896891)	C	HERVE-int	LTR/ERV1	(2)	7811	3832	4437605
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
1205	26.8	6.8	1.2	chrX	49282499	49283005	(106757890)	C	L2a	LINE/L2	(230)	3196	2668	4437841
21	18.1	2.0	0.0	chrX	51332520	51332569	(104708326)	+	(CCCTCGC)n	Simple_repeat	1	51	(0)	4440516
17	23.3	0.0	0.0	chrX	51332576	51332620	(104708275)	+	(GCGAAC)n	Simple_repeat	1	45	(0)	4440517
19	25.4	5.3	0.0	chrX	54808161	54808235	(101232660)	+	(AGTAGGA)n	Simple_repeat	1	79	(0)	4446411
14	27.3	5.3	1.2	chrX	54808223	54808298	(101232597)	+	G-rich	Low_complexity	1	80	(0)	4446412
18	22.7	0.0	3.6	chrX	56232300	56232354	(99808541)	+	(CCT)n	Simple_repeat	1	55	(0)	4447971
7813	23.9	2.9	4.4	chrX	56711623	56712679	(99328216)	C	L1PA11	LINE/L1	(5543)	2060	1	4448435
264	33.0	10.0	0.3	chrX	56712692	56712989	(99327906)	C	L1ME4c	LINE/L1	(341)	489	160	4448438
1526	15.8	4.9	1.2	chrX	56713017	56713348	(99327547)	+	L1MA7	LINE/L1	5943	6287	(4)	4448439
1876	14.2	0.0	0.3	chrX	56767310	56767647	(99273248)	+	LTR12C	LTR/ERV1	3	339	(1240)	4448516
13	19.6	0.0	0.0	chrX	56995464	56995493	(99045402)	+	(GGC)n	Simple_repeat	1	30	(0)	4448724
12	15.3	3.5	0.0	chrX	56995842	56995870	(99045025)	+	(CCCT)n	Simple_repeat	1	30	(0)	4448725
18	22.1	0.0	2.3	chrX	69164591	69164634	(86876261)	+	(GT)n	Simple_repeat	1	44	(0)	4457673
264	31.3	0.0	10.8	chrX	69502329	69502439	(86538456)	+	L2c	LINE/L2	3289	3426	(0)	4458289
386	29.2	5.8	3.7	chrX	69502544	69502678	(86538217)	+	L2b	LINE/L2	3204	3341	(34)	4458290
247	31.1	5.5	5.9	chrX	69502714	69502949	(86537946)	+	L2b	LINE/L2	2933	3167	(208)	4458291
19	3.8	0.0	0.0	chrX	70033708	70033734	(86007161)	+	(TTGTT)n	Simple_repeat	1	27	(0)	4458999
18	24.8	4.7	3.3	chrX	70455085	70455115	(85585780)	+	(CCCT)n	Simple_repeat	1	66	(24)	4459703
24	2.6	2.2	6.5	chrX	70455116	70455161	(85585734)	+	(CTC)n	Simple_repeat	1	44	(0)	4459704
18	24.8	4.7	3.3	chrX	70455162	70455170	(85585725)	+	(CCCT)n	Simple_repeat	67	90	(0)	4459703
22	9.4	6.5	0.0	chrX	71366187	71366232	(84674663)	+	(CCCCTCT)n	Simple_repeat	1	49	(0)	4461413
5466	9.9	2.9	0.8	chrX	72213162	72213924	(83826971)	+	LTR17	LTR/ERV1	1	780	(0)	4462901
9284	4.9	0.4	15.7	chrX	74097733	74099338	(81941557)	+	SVA_B	Retroposon/SVA	1	1360	(23)	4465176
17	24.0	0.0	6.1	chrX	74399554	74399619	(81641276)	+	(CGCC)n	Simple_repeat	1	66	(0)	4465565
2798	11.9	3.7	0.7	chrX	74399637	74399844	(81641051)	+	L1MC	LINE/L1	3481	3697	(2449)	4465562
8800	2.5	0.4	29.4	chrX	74567907	74569859	(81471036)	C	SVA_D	Retroposon/SVA	(0)	1386	3	4465836
6102	18.2	9.0	6.7	chrX	74569860	74570067	(81470828)	+	L1MD2	LINE/L1	5180	5398	(748)	4465834
1215	14.1	23.8	1.7	chrX	74570068	74570301	(81470594)	+	AluJb	SINE/Alu	1	302	(10)	4465837
3368	20.1	9.2	6.8	chrX	74570302	74571219	(81469676)	+	L1MD2	LINE/L1	5399	6334	(25)	4465834
4605	9.1	2.1	1.7	chrX	75707121	75708132	(80332763)	+	MER11A	LTR/ERVK	1	1266	(0)	4466977
5506	17.5	4.3	1.1	chrX	75708137	75709864	(80331031)	C	L1PBa1	LINE/L1	(1594)	5268	3461	4466978
2171	12.0	0.0	0.7	chrX	76173222	76173522	(79867373)	C	AluJb	SINE/Alu	(13)	299	1	4467323
1784	16.8	2.4	0.7	chrX	78118300	78118612	(77922283)	+	AluJb	SINE/Alu	1	312	(0)	4469525
1391	25.2	8.0	6.5	chrX	78118613	78119038	(77921857)	C	LTR33	LTR/ERVL	(78)	437	1	4469524
4853	8.7	2.0	1.7	chrX	82767039	82768150	(73272745)	C	MER11A	LTR/ERVK	(0)	1266	1	4474220
4771	10.1	2.2	1.6	chrX	84850868	84851875	(71189020)	+	MER11A	LTR/ERVK	1	1266	(0)	4476349
1182	15.7	6.3	0.9	chrX	84851876	84852099	(71188796)	+	MER89	LTR/ERV1	323	559	(0)	4476348
5535	9.7	8.9	3.4	chrX	88173796	88174890	(67866005)	C	MER11A	LTR/ERVK	(0)	1266	1	4479973
2123	9.0	0.0	0.0	chrX	91815873	91816127	(64224768)	+	AluSx1	SINE/Alu	28	282	(30)	4483878
1962	6.8	5.2	3.6	chrX	98508111	98508415	(57532480)	C	MER11A	LTR/ERVK	(0)	1266	957	4492141
1648	4.8	3.9	2.5	chrX	98508413	98508686	(57532209)	C	MER11A	LTR/ERVK	(892)	374	1	4492141
635	21.7	4.8	2.7	chrX	99629658	99629842	(56411053)	+	L1MCa	LINE/L1	4887	5075	(1489)	4493353
1573	18.7	11.7	2.0	chrX	99629843	99630196	(56410699)	C	MSTA	LTR/ERVL-MaLR	(35)	393	1	4493357
10331	11.6	2.3	5.5	chrX	99630197	99631883	(56409012)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	4493357
1236	25.5	4.6	5.1	chrX	101483193	101483692	(54557203)	C	L1ME4b	LINE/L1	(413)	479	12	4496109
38	0.0	0.0	6.8	chrX	101738364	101738422	(54302473)	+	(CCCTC)n	Simple_repeat	1	59	(0)	4496410
8880	8.0	2.3	3.6	chrX	101738423	101739716	(54301179)	+	SVA_A	Retroposon/SVA	1	1276	(111)	4496411
253	31.3	1.2	0.0	chrX	101799181	101799263	(54241632)	C	L2	LINE/L2	(998)	2421	2338	4496501
207	31.3	1.2	0.0	chrX	102346387	102346469	(53694426)	+	L2	LINE/L2	2338	2421	(998)	4497148
354	30.1	10.7	2.3	chrX	103255216	103255429	(52785466)	C	L1ME4a	LINE/L1	(686)	5557	5324	4498359
21	13.9	0.0	0.0	chrX	103687084	103687116	(52353779)	+	(T)n	Simple_repeat	1	33	(0)	4498992
15	11.7	0.0	0.0	chrX	104166475	104166502	(51874393)	+	(GGCCG)n	Simple_repeat	1	28	(0)	4499664
17	14.9	2.0	5.9	chrX	104167218	104167267	(51873628)	+	(CCTC)n	Simple_repeat	1	51	(0)	4499665
617	17.7	8.1	8.1	chrX	104313009	104313180	(51727715)	+	MLT1B	LTR/ERVL-MaLR	1	172	(218)	4499959
24	34.4	1.4	4.7	chrX	104313202	104313360	(51727535)	+	(CTCC)n	Simple_repeat	1	153	(0)	4499960
644	21.3	0.7	4.2	chrX	104313370	104313511	(51727384)	+	MLT1B	LTR/ERVL-MaLR	192	328	(62)	4499959
1416	13.7	0.5	0.5	chrX	104313518	104313722	(51727173)	C	AluJr	SINE/Alu	(107)	205	1	4499961
194	28.8	0.0	4.0	chrX	104744830	104744905	(51295990)	+	MIRc	SINE/MIR	196	268	(0)	4500625
4440	10.2	3.2	1.9	chrX	106235085	106236089	(49804806)	+	MER11A	LTR/ERVK	1	1266	(0)	4502517
10155	9.2	1.0	0.1	chrX	106236091	106238205	(49802690)	+	L1PB1	LINE/L1	3986	6114	(37)	4502518
7480	11.1	1.6	2.5	chrX	106550012	106551264	(49489631)	+	L1MA2	LINE/L1	2084	3325	(4240)	4502862
3620	7.0	6.6	0.4	chrX	106551265	106551763	(49489132)	+	LTR17	LTR/ERV1	249	780	(0)	4502863
219	32.2	2.2	1.1	chrX	106611465	106611552	(49429343)	C	MIRb	SINE/MIR	(3)	265	177	4502930
386	29.9	15.6	0.0	chrX	106802161	106802317	(49238578)	+	MIRb	SINE/MIR	74	259	(3)	4503206
1840	17.5	0.0	1.3	chrX	106811243	106811545	(49229350)	+	AluJb	SINE/Alu	1	299	(13)	4503222
8101	1.0	0.1	0.1	chrX	107612201	107613875	(48427020)	C	L1HS	LINE/L1	(3)	6152	4476	4504475
16	8.2	0.0	0.0	chrX	107732196	107732221	(48308674)	+	(CCTCC)n	Simple_repeat	1	26	(0)	4504724
12	16.9	0.0	0.0	chrX	107732527	107732553	(48308342)	+	(TCCCT)n	Simple_repeat	1	27	(0)	4504725
434	33.1	9.2	1.7	chrX	107732565	107732745	(48308150)	C	MamTip2	DNA/hAT-Tip100	(109)	196	1	4504726
22805	8.9	0.7	0.3	chrX	109019330	109025469	(47015426)	C	L1PA6	LINE/L1	(0)	6154	8	4506442
12	20.8	0.0	2.9	chrX	109625085	109625119	(46415776)	+	(GCGG)n	Simple_repeat	1	35	(0)	4507091
340	30.6	11.3	0.6	chrX	110167733	110167890	(45873005)	C	L2c	LINE/L2	(26)	3361	3185	4508043
281	36.9	4.7	0.0	chrX	110168285	110168406	(45872489)	C	L2b	LINE/L2	(24)	3351	3224	4508044
349	33.4	4.3	6.5	chrX	110413000	110413614	(45627281)	+	L2c	LINE/L2	201	801	(2618)	4508382
6649	6.0	20.7	4.8	chrX	110764327	110765381	(45275514)	+	MER11A	LTR/ERVK	1	1266	(0)	4508865
4382	5.0	2.8	1.3	chrX	110765382	110765680	(45275215)	C	L1PB1	LINE/L1	(1073)	5073	4769	4508863
49	0.0	0.0	0.0	chrX	111096870	111096911	(44943984)	+	(AC)n	Simple_repeat	1	42	(0)	4509347
15	31.9	2.7	1.3	chrX	112840662	112840736	(43200159)	+	GA-rich	Low_complexity	1	77	(0)	4511970
115	22.4	4.7	2.1	chrX	113299722	113300084	(42740811)	+	(CCTCT)n	Simple_repeat	1	372	(0)	4512642
378	36.5	4.0	6.0	chrX	113300275	113300885	(42740010)	+	L2b	LINE/L2	2527	3147	(240)	4512643
2557	15.3	8.9	5.6	chrX	113597152	113597726	(42443169)	+	LTR4	LTR/ERV1	1	596	(0)	4512979
18	10.0	0.0	2.9	chrX	115233318	115233351	(40807544)	+	(TTTGG)n	Simple_repeat	1	34	(0)	4515128
37	23.6	0.9	3.4	chrX	115233911	115234026	(40806869)	+	(CCGCCA)n	Simple_repeat	1	117	(0)	4515129
27	30.3	2.3	3.0	chrX	115234027	115234039	(40806856)	+	(CCG)n	Simple_repeat	1	132	(0)	4515130
1073	16.1	8.4	2.2	chrX	115333599	115333820	(40707075)	+	L1M4	LINE/L1	5374	5610	(568)	4515315
2299	8.7	3.0	0.7	chrX	115393782	115394079	(40646816)	C	AluSx1	SINE/Alu	(7)	305	1	4515431
2367	10.3	0.7	0.0	chrX	115394212	115394521	(40646374)	C	AluSz	SINE/Alu	(0)	312	1	4515432
2487	10.8	4.2	5.4	chrX	116918898	116919578	(39121317)	+	MER11A	LTR/ERVK	480	1266	(0)	4517158
6239	10.7	16.4	0.8	chrX	118013733	118014799	(38026096)	+	MER11A	LTR/ERVK	1	1266	(0)	4518424
13	24.8	3.7	1.8	chrX	118116823	118116876	(37924019)	+	GA-rich	Low_complexity	1	56	(0)	4518568
17	23.5	8.1	1.1	chrX	118495733	118495818	(37545077)	+	(AGCG)n	Simple_repeat	1	93	(0)	4519349
17	10.6	2.1	8.2	chrX	118495918	118495965	(37544930)	+	(CCGC)n	Simple_repeat	1	49	(0)	4519350
225	30.4	1.8	3.5	chrX	119763527	119763642	(36277253)	C	L2c	LINE/L2	(180)	3207	3094	4521764
200	32.7	10.9	1.9	chrX	119763690	119763898	(36276997)	C	L2c	LINE/L2	(443)	2976	2747	4521764
1117	10.0	1.3	0.0	chrX	119887931	119888080	(36152815)	C	AluJb	SINE/Alu	(34)	278	127	4522066
535	23.2	9.6	1.3	chrX	119895759	119895911	(36144984)	+	MIR	SINE/MIR	83	249	(13)	4522088
17	27.1	0.0	3.3	chrX	120250794	120250854	(35790041)	+	(CGG)n	Simple_repeat	1	61	(0)	4522654
16	16.0	4.5	2.2	chrX	120311471	120311514	(35729381)	+	(CCCT)n	Simple_repeat	1	46	(0)	4522745
13	17.7	1.9	7.5	chrX	120560732	120560783	(35480112)	+	GA-rich	Low_complexity	1	53	(0)	4523166
12	23.9	0.0	2.4	chrX	120561001	120561041	(35479854)	+	G-rich	Low_complexity	1	41	(0)	4523167
13	18.2	0.0	0.0	chrX	120561247	120561277	(35479618)	+	(CGCTCC)n	Simple_repeat	1	31	(0)	4523168
11	30.8	1.5	4.4	chrX	120561438	120561504	(35479391)	+	G-rich	Low_complexity	1	68	(0)	4523169
18	25.3	1.6	9.4	chrX	120561550	120561674	(35479221)	+	GA-rich	Low_complexity	1	127	(0)	4523170
7586	6.3	13.8	2.0	chrX	120807837	120808949	(35231946)	+	MER11A	LTR/ERVK	1	1266	(0)	4523651
1520	6.2	0.0	3.2	chrX	120808950	120808980	(35231915)	C	L1PB1	LINE/L1	(552)	5599	5569	4523648
1481	8.5	0.0	0.0	chrX	120808985	120809185	(35231710)	+	L1PB1	LINE/L1	5950	6150	(1)	4523652
9531	12.4	6.3	3.0	chrX	121479784	121481353	(34559542)	+	THE1C-int	LTR/ERVL-MaLR	3	1627	(4)	4524468
1950	10.6	7.6	6.2	chrX	121481354	121481835	(34559060)	C	MER11A	LTR/ERVK	(135)	1131	531	4524469
1780	9.5	0.8	0.4	chrX	121481830	121482082	(34558813)	+	MER11A	LTR/ERVK	1013	1266	(0)	4524470
6598	9.2	16.3	0.8	chrX	121939267	121940334	(34100561)	+	MER11A	LTR/ERVK	1	1266	(0)	4525003
48	0.0	0.0	0.0	chrX	123184095	123184135	(32856760)	+	(TC)n	Simple_repeat	1	41	(0)	4526383
31	35.2	2.4	2.8	chrX	123184217	123184422	(32856473)	+	G-rich	Low_complexity	1	211	(0)	4526384
15	25.1	4.3	2.7	chrX	123184738	123184807	(32856088)	+	G-rich	Low_complexity	1	73	(0)	4526385
50	0.0	0.0	0.0	chrX	123290587	123290629	(32750266)	+	(TG)n	Simple_repeat	1	43	(0)	4526557
17	12.4	2.9	0.0	chrX	123859760	123859794	(32181101)	+	G-rich	Low_complexity	1	36	(0)	4527539
38	11.2	4.9	2.3	chrX	123961642	123961723	(32079172)	+	(CCCT)n	Simple_repeat	1	86	(0)	4527820
3879	11.8	6.7	3.8	chrX	125466668	125467666	(30573229)	+	MER11A	LTR/ERVK	1	1266	(0)	4530150
6244	6.1	0.6	0.5	chrX	127816220	127816998	(28223897)	C	LTR17	LTR/ERV1	(0)	780	1	4532679
6490	7.9	18.4	0.7	chrX	127967992	127969031	(28071864)	C	MER11A	LTR/ERVK	(0)	1266	1	4532853
3637	12.1	4.6	4.8	chrX	128831734	128832826	(27208069)	+	MER11A	LTR/ERVK	1	1266	(0)	4533818
6839	8.0	0.7	0.1	chrX	128832830	128833777	(27207118)	C	L1P3	LINE/L1	(896)	5250	4297	4533819
15	15.9	2.9	0.0	chrX	129932336	129932370	(26108525)	+	(TCCC)n	Simple_repeat	1	36	(0)	4535598
22	20.1	4.2	2.7	chrX	129982405	129982476	(26058419)	+	(CTCC)n	Simple_repeat	1	75	(0)	4535724
17	4.9	0.0	0.0	chrX	129982601	129982621	(26058274)	+	(CA)n	Simple_repeat	1	21	(0)	4535725
13	17.7	2.5	2.4	chrX	130097927	130097966	(25942929)	+	(CTGCCCT)n	Simple_repeat	1	41	(0)	4535952
19	26.8	1.1	6.2	chrX	130110745	130110839	(25930056)	+	G-rich	Low_complexity	1	96	(0)	4535977
39	23.0	0.9	1.9	chrX	130110927	130111031	(25929864)	+	G-rich	Low_complexity	1	106	(0)	4535978
13	15.6	0.0	7.3	chrX	130111054	130111094	(25929801)	+	(CGCC)n	Simple_repeat	1	41	(0)	4535979
268	35.3	3.6	0.0	chrX	130126926	130127036	(25913859)	C	L2c	LINE/L2	(256)	3131	3014	4536004
33	0.0	0.0	0.0	chrX	130127037	130127064	(25913831)	+	(GT)n	Simple_repeat	1	28	(0)	4536005
259	38.0	3.7	0.6	chrX	130127065	130127111	(25913784)	C	L2c	LINE/L2	(362)	3013	2966	4536004
448	34.2	0.0	2.7	chrX	130127317	130127466	(25913429)	+	L2c	LINE/L2	3242	3387	(0)	4536006
5140	8.0	1.5	0.1	chrX	130303698	130304421	(25736474)	C	L1MA2	LINE/L1	(0)	6304	5571	4536312
19	25.4	0.0	3.1	chrX	130340011	130340074	(25700821)	+	(GCCGG)n	Simple_repeat	1	64	(0)	4536394
20	24.1	1.8	0.0	chrX	130506540	130506594	(25534301)	+	(TTTC)n	Simple_repeat	1	56	(0)	4536650
18	16.3	0.0	0.0	chrX	130506571	130506606	(25534289)	+	(CTTC)n	Simple_repeat	1	36	(0)	4536651
80	2.5	1.2	0.0	chrX	130506761	130506843	(25534052)	+	(ATCT)n	Simple_repeat	1	84	(0)	4536652
12	33.8	1.7	0.0	chrX	130506863	130506921	(25533974)	+	(TTTC)n	Simple_repeat	1	60	(0)	4536653
547	34.2	10.6	1.1	chrX	130565198	130565682	(25475213)	C	L2c	LINE/L2	(29)	3358	2822	4536752
13	14.3	2.9	2.9	chrX	130565904	130565937	(25474958)	+	A-rich	Low_complexity	1	35	(0)	4536753
456	27.6	10.8	6.2	chrX	130566191	130566561	(25474334)	+	MLT1H2	LTR/ERVL-MaLR	82	471	(18)	4536754
22841	8.4	1.4	1.3	chrX	130813450	130819874	(25221021)	+	L1PA7	LINE/L1	1	6469	(0)	4537130
16	0.0	0.0	0.0	chrX	130902816	130902833	(25138062)	+	(A)n	Simple_repeat	1	18	(0)	4537256
12	15.3	3.5	0.0	chrX	131063709	131063737	(24977158)	+	(CCA)n	Simple_repeat	1	30	(0)	4537551
16	21.4	5.6	0.0	chrX	132216520	132216573	(23824322)	+	G-rich	Low_complexity	1	57	(0)	4539075
5805	6.5	3.1	0.5	chrX	132419988	132420747	(23620148)	C	LTR17	LTR/ERV1	(0)	780	1	4539329
18	4.1	0.0	0.0	chrX	132957457	132957481	(23083414)	+	(CGG)n	Simple_repeat	1	25	(0)	4540157
16	0.0	0.0	0.0	chrX	134171570	134171589	(21869306)	+	(AAT)n	Simple_repeat	1	20	(0)	4542200
18	20.3	3.9	0.0	chrX	134520799	134520849	(21520046)	+	(ATTT)n	Simple_repeat	1	53	(0)	4542868
774	15.4	2.5	0.0	chrX	134520851	134520967	(21519928)	C	FLAM_A	SINE/Alu	(22)	120	1	4542869
1684	23.9	10.4	4.4	chrX	134520972	134521429	(21519466)	+	MLT1H1	LTR/ERVL-MaLR	19	525	(30)	4542867
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
71	27.0	4.4	4.9	chrX	134796358	134796747	(21244148)	+	GA-rich	Low_complexity	1	407	(0)	4543385
18	21.6	2.1	0.0	chrX	135022461	135022508	(21018387)	+	(GCGCT)n	Simple_repeat	1	49	(0)	4543827
17	3.9	3.7	0.0	chrX	135520841	135520867	(20520028)	+	(GTCCC)n	Simple_repeat	1	28	(0)	4544492
15	6.7	6.1	2.9	chrX	135521657	135521689	(20519206)	+	GA-rich	Low_complexity	1	35	(0)	4544493
30	26.9	0.9	3.6	chrX	135521835	135521944	(20518951)	+	(CTC)n	Simple_repeat	1	111	(0)	4544494
266	30.4	10.7	1.1	chrX	136064330	136064549	(19976346)	C	L2c	LINE/L2	(8)	3418	3158	4545309
551	29.8	14.8	2.5	chrX	136146384	136146786	(19894109)	+	L2b	LINE/L2	2913	3373	(2)	4545509
14	18.1	4.3	2.1	chrX	136147303	136147348	(19893547)	+	(CGCCCGT)n	Simple_repeat	1	48	(0)	4545511
12	28.9	0.0	3.7	chrX	136147377	136147430	(19893465)	+	(GCCCG)n	Simple_repeat	1	54	(0)	4545512
24	18.8	3.2	1.6	chrX	136147536	136147597	(19893298)	+	(CCG)n	Simple_repeat	1	64	(0)	4545513
12	0.0	5.3	0.0	chrX	136147715	136147733	(19893162)	+	(GCC)n	Simple_repeat	1	20	(0)	4545514
989	19.8	5.5	6.5	chrX	136908960	136909065	(19131830)	C	MER33	DNA/hAT-Charlie	(177)	147	35	4546848
17	20.4	2.2	0.0	chrX	136909304	136909348	(19131547)	+	G-rich	Low_complexity	1	46	(0)	4546851
19	28.6	0.0	0.0	chrX	136976033	136976091	(19064804)	+	A-rich	Low_complexity	1	59	(0)	4547010
2423	8.5	0.7	0.3	chrX	136976475	136976779	(19064116)	C	AluY	SINE/Alu	(5)	306	1	4547011
25	19.3	4.1	1.3	chrX	137566437	137566509	(18474386)	+	(CTCCTCC)n	Simple_repeat	1	76	(0)	4547980
13	18.4	0.0	0.0	chrX	137569217	137569247	(18471648)	+	G-rich	Low_complexity	1	31	(0)	4547985
19	30.8	3.2	1.0	chrX	138711423	138711515	(17329380)	+	(GGCG)n	Simple_repeat	1	96	(0)	4549625
29	0.0	0.0	0.0	chrX	138711798	138711824	(17329071)	+	(CCCACC)n	Simple_repeat	1	27	(0)	4549626
11927	8.9	0.7	0.2	chrX	139461489	139463061	(16577834)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4550711
30	19.2	3.9	4.6	chrX	139932170	139932273	(16108622)	+	(CCGCCCG)n	Simple_repeat	1	108	(0)	4551410
14	27.1	0.0	0.0	chrX	139933089	139933132	(16107763)	+	(CCCCG)n	Simple_repeat	1	44	(0)	4551411
43	28.4	1.7	3.4	chrX	140091612	140091784	(15949111)	+	GA-rich	Low_complexity	1	176	(0)	4551701
1217	24.8	8.6	2.1	chrX	140711196	140711676	(15329219)	C	L1ME4a	LINE/L1	(12)	6112	5598	4552675
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
37	2.6	0.0	0.0	chrX	147911523	147911561	(8129334)	+	(ACCAA)n	Simple_repeat	1	39	(0)	4562593
9025	12.3	7.8	3.7	chrX	149685270	149686782	(6354113)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4564925
2387	12.1	2.9	0.3	chrX	149686783	149687147	(6353748)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	4564925
13	26.0	1.3	7.5	chrX	149940246	149940324	(6100571)	+	G-rich	Low_complexity	1	80	(0)	4565180
2172	8.9	0.0	1.3	chrX	150976333	150976468	(5064427)	+	AluSq2	SINE/Alu	1	136	(177)	4566863
30	24.3	0.0	6.1	chrX	152120421	152120534	(3920361)	+	G-rich	Low_complexity	1	114	(0)	4568539
407	26.1	15.4	6.4	chrX	152863195	152863382	(3177513)	C	MIR	SINE/MIR	(24)	238	31	4569512
4751	16.3	11.3	6.4	chrX	152976303	152977502	(3063393)	C	MER11A	LTR/ERVK	(0)	1266	1	4569686
2776	16.8	3.8	1.3	chrX	153210981	153211523	(2829372)	C	L1MA4	LINE/L1	(6)	6294	5738	4569974
5143	8.4	1.1	1.9	chrX	153211524	153212645	(2828250)	C	MER11A	LTR/ERVK	(1)	1265	1	4569975
12	13.7	6.2	0.0	chrX	153321371	153321402	(2719493)	+	(CACCC)n	Simple_repeat	1	34	(0)	4570109
227	34.3	10.0	0.9	chrX	153625083	153625191	(2415704)	+	L2c	LINE/L2	3268	3387	(0)	4570501
11	26.1	0.0	4.3	chrX	153687554	153687599	(2353296)	+	G-rich	Low_complexity	1	46	(0)	4570607
16	31.1	1.2	3.5	chrX	153687786	153687869	(2353026)	+	(GGCG)n	Simple_repeat	1	85	(0)	4570608
14	20.9	0.0	5.5	chrX	153724559	153724631	(2316264)	+	G-rich	Low_complexity	1	68	(0)	4570654
19	12.2	2.8	0.0	chrX	153724921	153724956	(2315939)	+	GA-rich	Low_complexity	1	37	(0)	4570655
187	33.5	7.6	1.7	chrX	153779893	153780065	(2260830)	+	L2	LINE/L2	2680	2863	(556)	4570732
395	25.9	4.6	3.5	chrX	153818485	153818656	(2222239)	C	L2a	LINE/L2	(1107)	2312	2139	4570763
15	19.8	4.2	2.0	chrX	153819102	153819149	(2221746)	+	(GCG)n	Simple_repeat	1	50	(0)	4570767
17	5.0	0.0	0.0	chrX	153901097	153901117	(2139778)	+	(A)n	Simple_repeat	1	21	(0)	4570915
137	19.4	3.0	0.0	chrX	153901424	153901722	(2139173)	+	(CA)n	Simple_repeat	1	308	(0)	4570916
40	28.7	6.2	1.5	chrX	153970428	153970619	(2070276)	+	GA-rich	Low_complexity	1	204	(0)	4570994
13	10.4	2.9	5.6	chrX	153970720	153970754	(2070141)	+	(TGGCCG)n	Simple_repeat	1	36	(0)	4570995
11	21.2	0.0	2.9	chrX	154097219	154097253	(1943642)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	4571249
12	29.0	1.6	3.2	chrX	154097422	154097483	(1943412)	+	G-rich	Low_complexity	1	63	(0)	4571250
18	3.8	3.7	0.0	chrX	154097609	154097635	(1943260)	+	(CTC)n	Simple_repeat	1	28	(0)	4571251
17	0.0	4.2	0.0	chrX	154097639	154097662	(1943233)	+	(CGG)n	Simple_repeat	1	25	(0)	4571252
362	27.6	11.9	10.8	chrX	154591717	154591881	(1449014)	+	L1ME3G	LINE/L1	5419	5592	(532)	4572132
2831	9.4	0.3	0.0	chrX	154592108	154592470	(1448425)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	4572134
220	29.7	0.0	1.5	chrX	154592604	154592668	(1448227)	C	L2a	LINE/L2	(5)	3421	3358	4572135
15	21.4	3.0	5.8	chrX	155071159	155071225	(969670)	+	(CCTCCGC)n	Simple_repeat	1	69	(0)	4572850
11	12.8	8.8	0.0	chrX	155071421	155071454	(969441)	+	(GGCGCTG)n	Simple_repeat	1	37	(0)	4572851
37	0.0	0.0	0.0	chrX	155137269	155137302	(903593)	+	(CCCCCT)n	Simple_repeat	1	34	(0)	4572952
1940	10.3	1.1	0.4	chrX	155137400	155137670	(903225)	C	AluSx1	SINE/Alu	(5)	307	35	4572953
21	10.8	2.5	0.0	chrX	155216792	155216831	(824064)	+	(GGGGCGA)n	Simple_repeat	1	41	(0)	4573050
16	25.0	3.2	1.5	chrX	155216832	155216853	(824042)	+	G-rich	Low_complexity	2	65	(0)	4573051
4352	11.8	3.3	3.6	chrY	7753167	7754201	(49473214)	+	MER11A	LTR/ERVK	1	1266	(0)	4585287
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
471	23.6	1.6	5.4	chrY	11281810	11281939	(45945476)	C	MER21C	LTR/ERVL	(645)	223	99	4589057