12	24.1	0.0	2.4	chr1	922025	922065	(248034357)	+	(CCCCAG)n	Simple_repeat	1	41	(0)	1176
17	18.9	4.0	1.9	chr1	941911	941960	(248014462)	+	(CCG)n	Simple_repeat	1	52	(0)	1190
15	26.6	0.0	2.0	chr1	942055	942105	(248014317)	+	G-rich	Low_complexity	1	51	(0)	1191
20	0.0	0.0	0.0	chr1	943527	943548	(248012874)	+	(T)n	Simple_repeat	1	22	(0)	1192
18	22.0	0.0	0.0	chr1	945074	945115	(248011307)	+	(TCC)n	Simple_repeat	1	42	(0)	1194
365	23.6	8.2	2.7	chr1	1005447	1005607	(247950815)	C	MLT1H	LTR/ERVL-MaLR	(294)	255	48	1265
51	10.6	4.5	3.5	chr1	1170468	1170577	(247785845)	+	(CTCC)n	Simple_repeat	1	115	(0)	1431
12	22.0	2.7	0.0	chr1	1200941	1200977	(247755445)	+	G-rich	Low_complexity	1	38	(0)	1467
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
17	9.2	5.7	0.0	chr1	1308179	1308213	(247648209)	+	(GGGCGC)n	Simple_repeat	1	37	(0)	1575
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
15	19.8	7.5	2.8	chr1	1407559	1407625	(247548797)	+	G-rich	Low_complexity	1	72	(0)	1698
8217	5.2	2.0	0.5	chr1	1504966	1505957	(247450465)	C	LTR13	LTR/ERVK	(0)	1007	1	1868
12	24.4	2.2	2.2	chr1	1574178	1574222	(247382200)	+	(GCC)n	Simple_repeat	1	46	(0)	1974
13	17.1	2.3	4.5	chr1	1615445	1615487	(247340935)	+	G-rich	Low_complexity	1	44	(0)	2066
14	6.3	5.1	7.3	chr1	1785734	1785772	(247170650)	+	(TCCC)n	Simple_repeat	1	41	(0)	2342
387	10.4	30.8	4.2	chr1	1859402	1859497	(247096925)	+	AluJo	SINE/Alu	1	133	(179)	2484
1386	23.6	10.9	6.3	chr1	1859500	1859569	(247096853)	+	MER119	DNA/hAT-Charlie	479	562	(21)	2482
922	6.1	0.0	5.0	chr1	1859727	1859865	(247096557)	+	AluY	SINE/Alu	1	132	(179)	2485
1282	19.7	6.6	6.0	chr1	1861176	1861459	(247094963)	+	AluJr4	SINE/Alu	2	287	(25)	2492
17	4.3	0.0	0.0	chr1	1861460	1861483	(247094939)	+	(TAA)n	Simple_repeat	1	24	(0)	2493
12	26.1	6.2	4.8	chr1	2052425	2052521	(246903901)	+	(CCTT)n	Simple_repeat	1	103	(0)	2819
320	33.8	11.6	2.2	chr1	2140134	2140360	(246816062)	+	L1MEd	LINE/L1	585	835	(6251)	2918
21	24.3	0.0	4.1	chr1	2279575	2279647	(246676775)	+	G-rich	Low_complexity	1	73	(0)	3086
14	15.0	5.4	0.0	chr1	2314416	2314452	(246641970)	+	(GGCCCT)n	Simple_repeat	1	39	(0)	3108
200	19.1	2.3	0.0	chr1	2417272	2417313	(246539109)	C	L2b	LINE/L2	(214)	3161	3119	3207
13	10.2	11.4	2.0	chr1	2443491	2443534	(246512888)	+	(GGAGGC)n	Simple_repeat	1	49	(0)	3238
16	9.3	0.0	0.0	chr1	3069702	3069724	(245886698)	+	(CT)n	Simple_repeat	1	23	(0)	3719
22	16.8	2.4	0.0	chr1	3314568	3314609	(245641813)	+	(TC)n	Simple_repeat	1	43	(0)	3902
12	8.8	4.2	0.0	chr1	3314702	3314725	(245641697)	+	(TCC)n	Simple_repeat	1	25	(0)	3903
103	24.2	3.0	0.4	chr1	3351525	3351795	(245604627)	+	(TCTC)n	Simple_repeat	1	279	(0)	3933
20	23.3	4.3	4.2	chr1	3403023	3403114	(245553308)	+	(CCTCC)n	Simple_repeat	1	96	(0)	3968
182	29.7	9.8	0.0	chr1	3455448	3455521	(245500901)	+	MIRc	SINE/MIR	74	155	(113)	4015
12	18.4	0.0	3.0	chr1	3471528	3471560	(245484862)	+	G-rich	Low_complexity	1	33	(0)	4027
15	14.9	2.6	2.5	chr1	3502203	3502241	(245454181)	+	G-rich	Low_complexity	1	40	(0)	4063
30	13.7	1.8	0.0	chr1	3687658	3687713	(245268709)	+	(TCCCC)n	Simple_repeat	1	57	(0)	4237
13	27.5	1.9	1.8	chr1	3717251	3717304	(245239118)	+	(CCCAG)n	Simple_repeat	1	55	(0)	4266
15	25.3	3.4	2.5	chr1	3717314	3717377	(245239045)	+	G-rich	Low_complexity	1	64	(0)	4267
13	16.5	11.1	0.0	chr1	3747455	3747508	(245208914)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	4292
1677	23.0	8.9	2.5	chr1	4342907	4343455	(244612967)	+	MER92B	LTR/ERV1	1	587	(49)	5178
369	20.7	2.2	2.2	chr1	4343708	4343796	(244612626)	+	MER92B	LTR/ERV1	546	634	(2)	5178
13	17.1	3.0	0.0	chr1	5830854	5830886	(243125536)	+	(CTCC)n	Simple_repeat	1	34	(0)	7340
269	35.0	13.2	0.8	chr1	5980352	5980590	(242975832)	C	L2a	LINE/L2	(418)	3001	2729	7513
439	21.3	11.6	0.0	chr1	5991414	5991535	(242964887)	+	Charlie1a	DNA/hAT-Charlie	1031	1168	(287)	7533
15	16.5	4.7	2.2	chr1	5997317	5997359	(242959063)	+	GA-rich	Low_complexity	1	45	(0)	7539
21	25.2	1.2	4.8	chr1	6148996	6149077	(242807345)	+	(TCC)n	Simple_repeat	1	83	(0)	7738
12	14.6	0.0	5.9	chr1	6162952	6162985	(242793437)	+	G-rich	Low_complexity	1	34	(0)	7759
212	32.4	7.5	0.9	chr1	6204853	6204964	(242751458)	C	L2b	LINE/L2	(15)	3360	3241	7830
322	34.1	0.0	0.0	chr1	6234355	6234442	(242721980)	+	LFSINE_Vert	SINE/tRNA	4	91	(368)	7883
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
14	21.1	0.0	2.5	chr1	6338755	6338794	(242617628)	+	(GGCAGG)n	Simple_repeat	1	40	(0)	8020
13	25.8	0.0	0.0	chr1	6352345	6352382	(242604040)	+	(CCCT)n	Simple_repeat	1	38	(0)	8043
32	0.0	0.0	0.0	chr1	6378068	6378097	(242578325)	+	(AAAC)n	Simple_repeat	1	30	(0)	8095
14	17.8	0.0	2.9	chr1	6393307	6393340	(242563082)	+	(GGC)n	Simple_repeat	1	34	(0)	8132
17	10.5	0.0	10.0	chr1	6393473	6393525	(242562897)	+	(CCGCC)n	Simple_repeat	1	47	(0)	8133
14	24.0	1.5	6.0	chr1	6393526	6393533	(242562889)	+	(CGCGC)n	Simple_repeat	6	67	(0)	8134
15	7.0	6.7	0.0	chr1	6488777	6488806	(242467616)	+	(AGCCCC)n	Simple_repeat	1	32	(0)	8315
12	27.6	0.0	3.9	chr1	6614872	6614923	(242341499)	+	G-rich	Low_complexity	1	52	(0)	8546
16	20.6	3.9	1.9	chr1	6625131	6625182	(242331240)	+	(GCCCC)n	Simple_repeat	1	54	(0)	8559
234	29.5	13.1	3.5	chr1	6926014	6926157	(242030265)	+	MIR	SINE/MIR	67	226	(36)	9135
133	23.1	0.9	6.2	chr1	6926284	6926715	(242029707)	+	(CCTT)n	Simple_repeat	1	436	(0)	9136
590	33.9	2.6	2.6	chr1	6960509	6960772	(241995650)	+	L2c	LINE/L2	3106	3369	(18)	9191
19	12.3	4.3	2.1	chr1	6962345	6962390	(241994032)	+	(CCTCC)n	Simple_repeat	1	48	(0)	9194
730	28.2	20.9	3.1	chr1	7218229	7218971	(241737451)	C	L1MC4	LINE/L1	(5302)	913	4	9546
392	30.2	0.9	1.7	chr1	7341983	7342100	(241614322)	C	MIR	SINE/MIR	(40)	222	106	9730
521	31.8	8.7	4.8	chr1	7629354	7629669	(241326753)	C	X7A_LINE	LINE/CR1	(34)	233	12	10091
706	28.7	7.6	5.3	chr1	8822715	8823111	(240133311)	+	AmnSINE1	SINE/5S-Deu-L2	144	550	(25)	12318
2077	28.7	4.3	4.1	chr1	8829524	8830207	(240126215)	+	L2	LINE/L2	1094	1782	(1637)	12338
13	15.2	2.5	4.9	chr1	8848997	8849036	(240107386)	+	(CAGC)n	Simple_repeat	1	41	(0)	12384
11	20.1	2.9	0.0	chr1	8873709	8873742	(240082680)	+	G-rich	Low_complexity	1	35	(0)	12435
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
255	30.8	3.3	0.8	chr1	8943797	8943914	(240012508)	C	MLT1M	LTR/ERVL-MaLR	(350)	322	202	12606
234	29.6	10.0	5.0	chr1	9181574	9181768	(239774654)	C	MIRb	SINE/MIR	(23)	207	9	13109
13	13.7	0.0	0.0	chr1	9201744	9201768	(239754654)	+	(CCCT)n	Simple_repeat	1	25	(0)	13138
50	0.0	1.9	1.9	chr1	9201769	9201821	(239754601)	+	(CCT)n	Simple_repeat	1	54	(0)	13139
24	18.8	0.0	3.5	chr1	9201823	9201880	(239754542)	+	(GCT)n	Simple_repeat	1	58	(0)	13140
597	22.0	13.9	0.0	chr1	9352399	9352571	(239603851)	+	MER58A	DNA/hAT-Charlie	12	212	(12)	13413
16	27.5	0.0	4.5	chr1	9352637	9352703	(239603719)	+	(CCCTCC)n	Simple_repeat	1	67	(0)	13414
333	30.0	8.9	0.8	chr1	9520553	9520801	(239435621)	+	LTR16C	LTR/ERVL	182	452	(37)	13785
13	25.2	0.0	2.3	chr1	9687551	9687594	(239268828)	+	G-rich	Low_complexity	1	44	(0)	14179
221	24.8	16.8	1.5	chr1	9718362	9718492	(239237930)	C	MIR3	SINE/MIR	(4)	204	50	14242
433	28.9	14.7	2.4	chr1	9825948	9826156	(239130266)	+	MIRb	SINE/MIR	12	250	(12)	14457
12	13.6	0.0	7.9	chr1	9910656	9910693	(239045729)	+	(GGCGGA)n	Simple_repeat	1	38	(0)	14608
326	21.2	2.9	0.0	chr1	10432523	10432588	(238523834)	C	L2a	LINE/L2	(48)	3378	3311	15779
18	7.2	3.3	0.0	chr1	10432629	10432658	(238523764)	+	(AGG)n	Simple_repeat	1	31	(0)	15785
741	15.1	0.0	0.0	chr1	10432749	10432854	(238523568)	+	FAM	SINE/Alu	1	106	(79)	15786
16	19.1	0.0	0.0	chr1	10672204	10672233	(238284189)	+	(C)n	Simple_repeat	1	30	(0)	16205
935	12.1	0.8	0.0	chr1	10797361	10797492	(238158930)	+	FLAM_C	SINE/Alu	1	133	(10)	16353
27	29.9	1.5	9.7	chr1	10865898	10866161	(238090261)	+	A-rich	Low_complexity	1	268	(0)	16491
42	24.6	9.9	1.7	chr1	10865899	10866160	(238090262)	+	GA-rich	Low_complexity	1	288	(0)	16492
613	25.0	1.6	5.8	chr1	10909762	10909952	(238046470)	+	MIRb	SINE/MIR	41	223	(45)	16589
2251	9.9	8.2	5.1	chr1	10989849	10990200	(237966222)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	16786
1972	15.9	0.7	1.0	chr1	10990460	10990761	(237965661)	+	AluJb	SINE/Alu	1	301	(11)	16787
12	28.9	1.8	1.8	chr1	11414290	11414345	(237542077)	+	G-rich	Low_complexity	1	57	(0)	17650
309	15.8	3.8	12.6	chr1	11414456	11414507	(237541915)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	117	17651
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
381	19.6	16.0	0.4	chr1	11908990	11909143	(237047279)	C	MLT1J	LTR/ERVL-MaLR	(345)	167	1	18708
24	23.7	2.2	4.4	chr1	11921018	11921106	(237035316)	+	GA-rich	Low_complexity	1	91	(0)	18734
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
485	25.1	6.9	0.4	chr1	12020133	12020262	(236936160)	+	MIR	SINE/MIR	23	153	(115)	18970
275	32.6	8.2	7.8	chr1	12146732	12147081	(236809341)	C	L2c	LINE/L2	(97)	3329	2942	19259
33	3.1	0.0	0.0	chr1	12433918	12433950	(236522472)	+	(GA)n	Simple_repeat	1	33	(0)	19789
18	0.0	0.0	0.0	chr1	12433951	12433970	(236522452)	+	(TG)n	Simple_repeat	1	20	(0)	19790
14	0.0	0.0	0.0	chr1	12433970	12433987	(236522435)	+	(GGA)n	Simple_repeat	1	18	(0)	19791
38	4.9	0.0	0.0	chr1	12510514	12510555	(236445867)	+	(TG)n	Simple_repeat	1	42	(0)	19882
424	24.2	5.2	3.5	chr1	12523858	12524028	(236432394)	C	HAL1	LINE/L1	(110)	2397	2224	19908
279	27.4	1.2	0.0	chr1	12594900	12594983	(236361439)	C	L2a	LINE/L2	(825)	2594	2510	20050
336	16.0	4.8	1.0	chr1	12619303	12619402	(236337020)	C	MER5A	DNA/hAT-Charlie	(42)	147	33	20097
13	5.3	0.0	0.0	chr1	13587472	13587491	(235368931)	+	(GGA)n	Simple_repeat	1	20	(0)	21691
21	22.6	0.0	1.8	chr1	13751927	13751981	(235204441)	+	(CCCCT)n	Simple_repeat	1	55	(0)	21990
414	28.7	1.7	0.9	chr1	13751984	13752099	(235204323)	C	L2b	LINE/L2	(0)	3375	3259	21991
198	33.1	5.5	2.9	chr1	14415259	14415398	(234541024)	C	L2a	LINE/L2	(680)	2739	2596	23113
545	30.1	8.0	1.9	chr1	14415588	14415858	(234540564)	+	LTR16C	LTR/ERVL	187	475	(14)	23124
28	16.6	3.3	0.0	chr1	14598733	14598793	(234357629)	+	(CTC)n	Simple_repeat	1	63	(0)	23491
13	16.7	7.5	0.0	chr1	14598768	14598807	(234357615)	+	(CCG)n	Simple_repeat	1	43	(0)	23492
185	29.3	4.5	0.0	chr1	14668371	14668455	(234287967)	C	MIR3	SINE/MIR	(90)	178	88	23624
16	21.0	1.4	7.1	chr1	15153699	15153767	(233802655)	+	(CCGCCTC)n	Simple_repeat	1	70	(0)	24655
2081	16.9	0.5	3.3	chr1	15200433	15200663	(233755759)	+	MLT1B	LTR/ERVL-MaLR	169	390	(0)	24764
225	31.1	11.2	1.6	chr1	15200718	15200838	(233755584)	+	UCON80_AMi	Unknown	78	211	(11)	24766
76	15.3	8.1	3.7	chr1	15222614	15222864	(233733558)	+	GA-rich	Low_complexity	1	261	(0)	24809
636	21.8	7.2	0.0	chr1	15249913	15250054	(233706368)	+	MIR	SINE/MIR	103	255	(7)	24863
345	18.7	1.3	3.9	chr1	15409471	15409548	(233546874)	C	UCON78	DNA	(215)	228	153	25190
225	30.4	2.8	0.0	chr1	15431179	15431247	(233525175)	+	MIR3	SINE/MIR	83	153	(55)	25232
23	19.7	0.0	5.6	chr1	15758465	15758535	(233197887)	+	(CCCCATT)n	Simple_repeat	1	71	(0)	25956
2303	7.2	0.0	5.7	chr1	15792383	15792713	(233163709)	+	AluSx	SINE/Alu	1	312	(0)	26047
16	18.1	8.3	3.1	chr1	15847646	15847705	(233108717)	+	(CG)n	Simple_repeat	1	65	(0)	26202
331	25.9	11.0	9.1	chr1	15850426	15850612	(233105810)	C	L1ME4b	LINE/L1	(0)	892	702	26205
51	20.9	2.9	5.1	chr1	15959482	15959651	(232996771)	+	GA-rich	Low_complexity	1	175	(0)	26402
826	20.0	0.0	0.7	chr1	15959652	15959802	(232996620)	+	AluJb	SINE/Alu	163	312	(0)	26394
549	26.9	7.9	5.4	chr1	15963676	15963828	(232992594)	+	L1ME3F	LINE/L1	1626	1777	(5326)	26410
1970	17.1	5.3	8.8	chr1	15985990	15986339	(232970083)	C	L1MB7	LINE/L1	(0)	6184	5869	26460
2057	12.4	0.3	0.3	chr1	15986340	15986630	(232969792)	C	AluSz	SINE/Alu	(21)	291	1	26461
12	8.4	0.0	6.9	chr1	16017718	16017746	(232938676)	+	(TCCCC)n	Simple_repeat	1	29	(0)	26524
181	25.3	11.2	3.1	chr1	16017887	16017984	(232938438)	+	L3	LINE/CR1	386	492	(3607)	26525
269	27.7	4.8	4.0	chr1	16055882	16056005	(232900417)	+	MIRc	SINE/MIR	112	236	(32)	26589
289	34.0	0.0	1.0	chr1	16056013	16056113	(232900309)	+	MIRc	SINE/MIR	18	117	(151)	26590
12	15.9	5.7	0.0	chr1	16087936	16087970	(232868452)	+	(CCTCCCT)n	Simple_repeat	1	37	(0)	26662
2065	14.2	0.0	2.6	chr1	16118276	16118584	(232837838)	C	AluSq	SINE/Alu	(12)	301	1	26728
497	24.8	9.8	9.0	chr1	16164128	16164371	(232792051)	+	L2a	LINE/L2	3179	3424	(2)	26821
296	31.6	6.8	0.7	chr1	16164414	16164550	(232791872)	+	MIR	SINE/MIR	73	218	(44)	26824
623	24.9	3.9	13.2	chr1	16199663	16200092	(232756330)	+	L2b	LINE/L2	2799	3191	(235)	26920
378	27.2	9.8	6.4	chr1	16244647	16244803	(232711619)	C	MIRb	SINE/MIR	(94)	174	12	27019
32	11.8	2.9	2.9	chr1	16499333	16499400	(232457022)	+	(GGCCGG)n	Simple_repeat	1	70	(0)	27637
935	7.7	1.7	0.0	chr1	16724351	16724467	(232231955)	C	AluSx3	SINE/Alu	(26)	285	167	28012
16	19.0	0.0	8.2	chr1	16980203	16980251	(231976171)	+	(CT)n	Simple_repeat	1	49	(0)	28404
2179	11.2	0.3	0.0	chr1	16997560	16997846	(231958576)	+	AluSx1	SINE/Alu	1	288	(24)	28441
25	10.6	6.1	2.9	chr1	16997847	16997908	(231958514)	+	G-rich	Low_complexity	4	67	(0)	28442
386	30.3	11.6	5.9	chr1	17121462	17121647	(231834775)	C	MIR	SINE/MIR	(0)	262	65	28725
14	0.0	0.0	4.5	chr1	17525179	17525200	(231431222)	+	(GGGA)n	Simple_repeat	1	22	(0)	29638
12	16.4	2.8	2.7	chr1	17551993	17552028	(231404394)	+	G-rich	Low_complexity	1	37	(0)	29712
254	26.1	8.2	1.5	chr1	17552175	17552309	(231404113)	+	MIRc	SINE/MIR	3	155	(113)	29713
13	24.8	0.0	0.0	chr1	17597106	17597143	(231359279)	+	(CTGCAT)n	Simple_repeat	1	38	(0)	29820
77	32.6	1.7	1.3	chr1	17859500	17859703	(231096719)	+	GA-rich	Low_complexity	1	204	(0)	30381
18	17.6	4.9	3.1	chr1	17859923	17859983	(231096439)	+	G-rich	Low_complexity	1	64	(0)	30382
2164	11.0	5.9	1.1	chr1	18234472	18234828	(230721594)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	31208
259	35.4	1.4	3.4	chr1	18235034	18235182	(230721240)	+	MER5B	DNA/hAT-Charlie	1	146	(32)	31209
544	29.2	1.1	3.1	chr1	18326400	18326593	(230629829)	+	MamRep434	DNA/TcMar-Tigger	128	317	(109)	31400
27	28.6	0.0	2.3	chr1	18599463	18599550	(230356872)	+	G-rich	Low_complexity	1	88	(0)	32014
21	16.0	0.0	1.4	chr1	18599552	18599590	(230356832)	+	A-rich	Low_complexity	1	38	(0)	32015
183	34.8	2.6	10.4	chr1	18659171	18659295	(230297127)	+	L2b	LINE/L2	3245	3359	(16)	32131
516	30.9	7.1	2.1	chr1	18888864	18889144	(230067278)	+	L4_A_Mam	LINE/RTE-X	3047	3342	(1648)	32625
13	19.9	2.4	2.3	chr1	19070513	19070554	(229885868)	+	G-rich	Low_complexity	1	43	(0)	33049
313	29.9	20.5	1.5	chr1	19070798	19071194	(229885228)	C	L2a	LINE/L2	(2)	3424	2933	33050
13	5.3	0.0	0.0	chr1	19485439	19485458	(229470964)	+	(GGC)n	Simple_repeat	1	20	(0)	33724
416	14.1	0.0	6.0	chr1	19557577	19557659	(229398763)	+	LTR37-int	LTR/ERV1	2491	2568	(2650)	33914
119	7.1	1.4	5.5	chr1	19557660	19557874	(229398548)	+	(CTTCC)n	Simple_repeat	1	218	(0)	33915
1867	15.6	2.2	0.7	chr1	19557887	19558193	(229398229)	C	AluJb	SINE/Alu	(0)	312	1	33916
377	30.8	5.6	0.0	chr1	19597826	19597942	(229358480)	C	MIRc	SINE/MIR	(124)	144	21	34020
204	26.7	19.7	4.1	chr1	19643079	19643273	(229313149)	C	L2c	LINE/L2	(182)	3205	2973	34116
1520	18.5	6.6	0.7	chr1	19647185	19647454	(229308968)	+	AluJo	SINE/Alu	25	311	(1)	34122
561	25.4	9.0	2.0	chr1	19647455	19647492	(229308930)	C	MIR	SINE/MIR	(172)	90	40	34121
39	14.4	0.0	0.0	chr1	19647851	19647913	(229308509)	+	(GT)n	Simple_repeat	1	63	(0)	34123
13	18.0	0.0	2.9	chr1	20290791	20290824	(228665598)	+	GA-rich	Low_complexity	1	34	(0)	35454
22	29.9	2.7	0.0	chr1	20367083	20367156	(228589266)	+	GA-rich	Low_complexity	1	76	(0)	35612
1003	30.9	10.8	0.7	chr1	20367209	20367824	(228588598)	+	L2a	LINE/L2	2085	2770	(649)	35613
465	31.7	4.6	1.6	chr1	20402784	20402972	(228553450)	+	MIRc	SINE/MIR	71	265	(3)	35699
558	28.2	6.5	2.5	chr1	20403214	20403413	(228553009)	C	MIRb	SINE/MIR	(48)	220	13	35700
15	28.1	2.4	8.5	chr1	20430627	20430752	(228525670)	+	G-rich	Low_complexity	1	129	(0)	35753
15	11.5	0.0	3.2	chr1	20552450	20552480	(228403942)	+	(GGGGA)n	Simple_repeat	1	31	(0)	36029
451	27.0	13.4	5.6	chr1	20728153	20728454	(228227968)	C	L2a	LINE/L2	(3)	3423	3095	36434
11	20.7	0.0	2.9	chr1	21289985	21290019	(227666403)	+	(GGCAGC)n	Simple_repeat	1	35	(0)	37581
474	31.1	10.9	4.8	chr1	21310163	21310574	(227645848)	C	MLT1K	LTR/ERVL-MaLR	(116)	479	40	37634
319	25.0	0.0	3.5	chr1	21335828	21335914	(227620508)	C	MIR3	SINE/MIR	(54)	154	71	37698
17	12.1	2.4	4.8	chr1	21368546	21368586	(227587836)	+	(CCTT)n	Simple_repeat	1	42	(0)	37782
1088	28.8	6.0	2.3	chr1	21433293	21433806	(227522616)	C	L1ME4b	LINE/L1	(200)	692	163	37903
726	21.4	2.2	0.0	chr1	21433807	21433937	(227522485)	C	FLAM_A	SINE/Alu	(8)	134	1	37905
3211	22.0	8.8	1.9	chr1	21490542	21491480	(227464942)	+	LTR28C	LTR/ERV1	1	1659	(96)	38003
36	16.8	2.4	1.2	chr1	21509279	21509360	(227447062)	+	G-rich	Low_complexity	1	84	(0)	38048
13	21.5	4.0	1.9	chr1	21509424	21509473	(227446949)	+	(CCGCGCT)n	Simple_repeat	1	52	(0)	38049
217	37.9	9.6	0.0	chr1	21593517	21593648	(227362774)	C	MIR	SINE/MIR	(7)	255	110	38257
463	35.9	3.3	1.7	chr1	21632334	21632568	(227323854)	C	MIRc	SINE/MIR	(0)	268	30	38334
494	29.1	7.6	0.0	chr1	21652260	21652419	(227304003)	+	MIR	SINE/MIR	97	257	(5)	38390
274	26.7	4.7	2.9	chr1	21656008	21656111	(227300311)	+	MIR3	SINE/MIR	36	141	(67)	38401
2290	9.7	3.9	0.0	chr1	21656151	21656448	(227299974)	+	AluSg	SINE/Alu	1	310	(0)	38402
15	26.0	0.0	3.7	chr1	21669299	21669352	(227287070)	+	(CCG)n	Simple_repeat	1	54	(0)	38431
13	4.2	8.0	0.0	chr1	21669458	21669482	(227286940)	+	(CCCCG)n	Simple_repeat	1	27	(0)	38432
463	23.6	0.8	0.0	chr1	21669510	21669632	(227286790)	C	MIR3	SINE/MIR	(61)	147	24	38433
2239	10.1	0.0	3.2	chr1	21758890	21759205	(227197217)	+	AluSz	SINE/Alu	1	306	(6)	38595
1817	23.6	11.0	9.0	chr1	21759206	21759456	(227196966)	+	L1MC4	LINE/L1	6176	6426	(1456)	38591
3194	19.4	12.0	1.2	chr1	21759458	21760294	(227196128)	+	L1MC4	LINE/L1	6774	7713	(329)	38591
2472	7.9	0.3	0.0	chr1	21923126	21923429	(227032993)	+	AluSx1	SINE/Alu	2	306	(6)	38966
292	24.7	6.3	8.2	chr1	22024094	22024190	(226932232)	C	MIR3	SINE/MIR	(8)	200	106	39246
259	27.9	1.7	2.7	chr1	22025238	22025366	(226931056)	C	MIRb	SINE/MIR	(28)	180	60	39248
213	27.3	12.0	2.2	chr1	22143777	22143911	(226812511)	+	MIRc	SINE/MIR	4	153	(115)	39480
13	4.1	8.0	0.0	chr1	22251020	22251044	(226705378)	+	(TCC)n	Simple_repeat	1	27	(0)	39734
13	17.3	5.1	0.0	chr1	22350732	22350770	(226605652)	+	G-rich	Low_complexity	1	41	(0)	39961
14	4.0	3.6	3.5	chr1	22673605	22673632	(226282790)	+	(CTCTC)n	Simple_repeat	1	29	(0)	40649
325	27.1	7.2	4.7	chr1	22776105	22776336	(226180086)	+	L2c	LINE/L2	2922	3159	(228)	40913
265	19.1	2.1	0.0	chr1	22976384	22976430	(225979992)	+	L2c	LINE/L2	3301	3348	(39)	41383
1792	15.9	2.7	4.3	chr1	23047620	23047921	(225908501)	+	AluJb	SINE/Alu	1	297	(15)	41517
15	24.0	3.7	5.9	chr1	23217346	23217427	(225738995)	+	(CGC)n	Simple_repeat	1	85	(0)	41899
14	28.8	0.0	4.7	chr1	23217493	23217556	(225738866)	+	(CTC)n	Simple_repeat	1	64	(0)	41900
13	9.3	0.0	0.0	chr1	23554620	23554642	(225401780)	+	(GAAG)n	Simple_repeat	1	23	(0)	42729
456	27.0	6.0	0.8	chr1	23555295	23555421	(225401001)	+	MIRb	SINE/MIR	22	155	(113)	42731
297	22.2	8.0	0.0	chr1	23556663	23556743	(225399679)	+	Charlie24	DNA/hAT-Charlie	2363	2450	(0)	42735
195	36.1	0.9	0.0	chr1	23557087	23557194	(225399228)	+	MIR1_Amn	SINE/MIR	57	165	(65)	42736
14	17.1	1.9	7.4	chr1	23598756	23598808	(225357614)	+	G-rich	Low_complexity	1	54	(0)	42840
2220	10.6	0.3	0.0	chr1	23651973	23652275	(225304147)	C	AluSx	SINE/Alu	(8)	304	1	43000
221	30.9	0.0	0.0	chr1	23652277	23652331	(225304091)	C	MIR	SINE/MIR	(117)	145	91	43001
15	21.0	3.6	3.5	chr1	23652376	23652430	(225303992)	+	G-rich	Low_complexity	1	57	(0)	43002
13	24.4	2.2	2.1	chr1	23652699	23652744	(225303678)	+	(CCTCC)n	Simple_repeat	1	47	(0)	43003
12	28.6	0.0	5.0	chr1	23791313	23791372	(225165050)	+	G-rich	Low_complexity	1	60	(0)	43381
1424	10.7	0.5	0.0	chr1	23934712	23934916	(225021506)	C	MER4B	LTR/ERV1	(404)	206	1	43758
10687	3.4	0.8	10.9	chr1	23934959	23936501	(225019921)	+	SVA_D	Retroposon/SVA	1	1385	(1)	43759
226	27.5	4.4	6.0	chr1	23958797	23958912	(224997510)	C	MARNA	DNA/TcMar-Mariner	(31)	555	442	43809
197	19.2	3.7	1.9	chr1	23959014	23959066	(224997356)	C	L2b	LINE/L2	(2)	3373	3320	43810
1222	27.2	9.9	3.7	chr1	24011609	24012309	(224944113)	+	MLT1B-int	LTR/ERVL-MaLR	521	1323	(64)	43916
717	29.9	15.9	2.1	chr1	24043209	24043690	(224912732)	+	L2a	LINE/L2	2710	3256	(170)	44000
490	16.1	0.0	0.0	chr1	24043699	24043779	(224912643)	C	AluJb	SINE/Alu	(10)	302	222	44001
1786	14.9	5.8	1.8	chr1	24112786	24113114	(224843308)	+	LTR32	LTR/ERVL	1	343	(114)	44158
624	8.9	0.0	0.0	chr1	24150784	24150862	(224805560)	+	AluSx1	SINE/Alu	139	217	(95)	44238
586	24.9	8.6	1.5	chr1	24150941	24151144	(224805278)	C	MER34B	LTR/ERV1	(1)	564	345	44239
3731	5.6	5.8	0.0	chr1	24151160	24151642	(224804780)	C	LTR10D	LTR/ERV1	(0)	513	1	44240
15	5.6	0.0	0.0	chr1	24187428	24187446	(224768976)	+	(G)n	Simple_repeat	1	19	(0)	44324
498	24.9	5.5	7.5	chr1	24193204	24193390	(224763032)	C	MLT1K	LTR/ERVL-MaLR	(341)	254	72	44342
760	29.9	6.7	2.1	chr1	24193438	24193721	(224762701)	C	L3	LINE/CR1	(25)	4074	3777	44343
35	16.6	3.1	4.0	chr1	24502195	24502290	(224454132)	+	GA-rich	Low_complexity	1	99	(0)	45042
364	19.8	12.2	0.0	chr1	24862465	24862565	(224093857)	C	UCON105	Unknown	(42)	231	117	45885
211	28.9	4.6	2.4	chr1	24898156	24898240	(224058182)	C	L3b	LINE/CR1	(195)	5037	4951	45964
13	0.0	0.0	0.0	chr1	24929788	24929804	(224026618)	+	(GCC)n	Simple_repeat	1	17	(0)	46009
324	28.2	10.6	0.0	chr1	25565341	25565450	(223390972)	C	L3	LINE/CR1	(111)	3988	3866	47398
456	26.7	13.3	0.7	chr1	25661292	25661442	(223294980)	C	L2a	LINE/L2	(0)	3426	3254	47582
18	12.6	0.0	2.7	chr1	25871521	25871557	(223084865)	+	(CCTCC)n	Simple_repeat	1	37	(0)	47987
606	25.4	18.3	1.4	chr1	25889424	25890137	(223066285)	+	L2a	LINE/L2	2463	3422	(4)	48036
1840	15.5	3.4	0.0	chr1	26027574	26027857	(222928565)	+	AluJb	SINE/Alu	1	294	(18)	48388
285	28.2	4.7	11.4	chr1	26027858	26027939	(222928483)	C	L2b	LINE/L2	(269)	3106	3029	48386
13	21.3	8.6	3.4	chr1	26280474	26280495	(222675927)	+	(CTGACC)n	Simple_repeat	1	34	(54)	48974
16	8.2	0.0	0.0	chr1	26280496	26280521	(222675901)	+	(CCTCC)n	Simple_repeat	1	26	(0)	48975
13	21.3	8.6	3.4	chr1	26280522	26280554	(222675868)	+	(CTGACC)n	Simple_repeat	35	88	(0)	48974
13	9.8	9.1	0.0	chr1	26315577	26315609	(222640813)	+	(CCTC)n	Simple_repeat	1	36	(0)	49048
2368	10.3	0.0	0.0	chr1	26315649	26315950	(222640472)	C	AluSq2	SINE/Alu	(2)	311	10	49049
195	30.8	2.5	7.1	chr1	26993226	26993351	(221963071)	C	MIR3	SINE/MIR	(76)	132	13	50662
13	10.1	5.9	2.8	chr1	27122850	27122883	(221833539)	+	G-rich	Low_complexity	1	36	(0)	50979
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
18	0.0	0.0	0.0	chr1	27155281	27155300	(221801122)	+	(A)n	Simple_repeat	1	20	(0)	51052
15	13.4	0.0	10.0	chr1	27234576	27234625	(221721797)	+	(CGCAGG)n	Simple_repeat	1	50	(0)	51286
16	32.7	0.0	0.0	chr1	27234693	27234745	(221721677)	+	(GT)n	Simple_repeat	1	53	(0)	51287
21	5.6	2.4	4.8	chr1	27307586	27307626	(221648796)	+	(CCTC)n	Simple_repeat	1	42	(0)	51470
23	14.6	0.0	0.0	chr1	27388444	27388481	(221567941)	+	(AC)n	Simple_repeat	1	38	(0)	51633
370	31.3	3.1	1.4	chr1	27491791	27491965	(221464457)	C	MIRb	SINE/MIR	(63)	205	20	51858
17	6.3	0.0	9.8	chr1	27491994	27492034	(221464388)	+	(CTCCC)n	Simple_repeat	1	41	(0)	51859
211	24.0	0.0	0.0	chr1	27496959	27497013	(221459409)	+	L2a	LINE/L2	3036	3090	(285)	51877
187	23.2	17.2	0.0	chr1	27525729	27525810	(221430612)	+	L2b	LINE/L2	3067	3165	(210)	51964
30	3.1	0.0	0.0	chr1	27527865	27527897	(221428525)	+	(GCCCTC)n	Simple_repeat	1	33	(0)	51967
16	8.3	0.0	0.0	chr1	27529236	27529261	(221427161)	+	(CCTC)n	Simple_repeat	1	26	(0)	51968
16	20.9	1.9	3.7	chr1	27556201	27556253	(221400169)	+	(CCTCC)n	Simple_repeat	1	54	(0)	52025
24	30.7	0.0	2.4	chr1	27560847	27560929	(221395493)	+	(GT)n	Simple_repeat	1	83	(0)	52030
19	16.5	6.1	0.0	chr1	27560930	27560979	(221395443)	+	(CCTC)n	Simple_repeat	1	53	(0)	52031
12	23.3	2.5	0.0	chr1	27575934	27575973	(221380449)	+	G-rich	Low_complexity	1	41	(0)	52050
11	20.2	2.9	0.0	chr1	27593174	27593207	(221363215)	+	(GGCAGG)n	Simple_repeat	1	35	(0)	52087
16	13.8	2.9	2.9	chr1	27594684	27594717	(221361705)	+	GA-rich	Low_complexity	1	35	(0)	52090
44	35.1	3.0	0.4	chr1	27597757	27597991	(221358431)	+	(TCTC)n	Simple_repeat	1	242	(0)	52094
22	21.2	0.0	0.0	chr1	27603144	27603195	(221353227)	+	(C)n	Simple_repeat	1	52	(0)	52101
27	24.1	5.0	1.0	chr1	27603753	27603859	(221352563)	+	(CTCT)n	Simple_repeat	1	111	(0)	52102
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
246	25.0	12.4	2.4	chr1	27650813	27650935	(221305487)	C	LTR16E1	LTR/ERVL	(32)	506	370	52217
190	18.9	1.9	7.0	chr1	27650936	27650992	(221305430)	C	MIRb	SINE/MIR	(39)	229	176	52218
668	24.1	20.3	5.5	chr1	27650976	27651493	(221304929)	C	L2a	LINE/L2	(0)	3426	2823	52219
14	22.2	5.8	0.0	chr1	27672284	27672335	(221284087)	+	(TCTGCAC)n	Simple_repeat	1	55	(0)	52273
5626	8.6	5.7	2.9	chr1	27852132	27853189	(221103233)	+	SVA_F	Retroposon/SVA	8	870	(517)	52676
675	17.1	3.0	0.0	chr1	27934659	27934787	(221021635)	+	L1MC5a	LINE/L1	9169	9301	(3)	52886
230	35.1	0.0	2.5	chr1	27934791	27934869	(221021553)	+	L2c	LINE/L2	3123	3199	(176)	52885
1683	14.3	0.3	13.4	chr1	28173324	28173666	(220782756)	+	AluJb	SINE/Alu	1	298	(14)	53444
16	25.2	0.0	0.0	chr1	28173667	28173683	(220782739)	+	GA-rich	Low_complexity	26	42	(0)	53445
20	13.7	0.0	0.0	chr1	28173836	28173867	(220782555)	+	(CA)n	Simple_repeat	1	32	(0)	53446
403	25.8	0.0	3.0	chr1	28190852	28190951	(220765471)	+	MIRb	SINE/MIR	50	146	(122)	53501
18	14.0	6.0	1.9	chr1	28191010	28191059	(220765363)	+	(TCCTCT)n	Simple_repeat	1	53	(0)	53502
216	35.1	13.4	3.9	chr1	28248844	28248997	(220707425)	C	MIRc	SINE/MIR	(75)	193	23	53651
351	24.1	0.0	1.2	chr1	28249719	28249798	(220706624)	+	L2b	LINE/L2	3296	3374	(1)	53652
41	15.7	0.0	2.4	chr1	28260101	28260183	(220696239)	+	(CCCCTC)n	Simple_repeat	1	83	(0)	53685
2392	9.6	0.0	0.0	chr1	28262647	28262949	(220693473)	+	AluSc8	SINE/Alu	1	303	(8)	53691
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
32	38.1	3.4	3.2	chr1	28770799	28770805	(220185617)	+	(TTTC)n	Simple_repeat	1	36	(211)	55099
92	10.0	8.6	0.9	chr1	28770806	28771003	(220185419)	+	(CTTCC)n	Simple_repeat	1	215	(0)	55100
13	15.4	5.6	0.0	chr1	28865185	28865220	(220091202)	+	(CTCCT)n	Simple_repeat	1	38	(0)	55347
372	29.2	0.0	0.0	chr1	28882364	28882459	(220073963)	+	MIRc	SINE/MIR	57	152	(116)	55396
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
62	17.9	4.1	0.7	chr1	28897560	28897704	(220058718)	+	GA-rich	Low_complexity	1	151	(0)	55441
213	30.7	8.3	2.2	chr1	28897721	28897810	(220058612)	+	MIRc	SINE/MIR	104	201	(29)	55442
316	23.8	3.6	1.2	chr1	28897823	28897903	(220058519)	C	L2c	LINE/L2	(11)	3376	3294	55443
13	20.6	4.0	3.9	chr1	28927641	28927692	(220028730)	+	(TCCC)n	Simple_repeat	1	52	(0)	55531
614	28.6	8.7	0.9	chr1	29182217	29182438	(219773984)	+	MIRb	SINE/MIR	28	268	(0)	56089
288	34.1	9.7	5.8	chr1	29243197	29243779	(219712643)	+	L2b	LINE/L2	2766	3361	(14)	56243
42	7.8	2.9	0.0	chr1	29453761	29453828	(219502594)	+	(TCC)n	Simple_repeat	1	70	(0)	56638
427	33.1	2.1	0.0	chr1	29633820	29633961	(219322461)	+	L2c	LINE/L2	2795	2939	(480)	56988
285	33.1	5.3	8.9	chr1	29634003	29634294	(219322128)	+	L2c	LINE/L2	3106	3386	(1)	56988
17	2.9	0.0	13.0	chr1	29698208	29698253	(219258169)	+	G-rich	Low_complexity	1	46	(0)	57107
17	13.0	7.4	3.5	chr1	29698254	29698259	(219258163)	+	(GCAGG)n	Simple_repeat	3	58	(0)	57108
199	15.9	1.2	1.9	chr1	29707258	29707649	(219248773)	+	G-rich	Low_complexity	1	389	(0)	57129
1695	15.2	8.4	0.0	chr1	30050360	30050675	(218905747)	C	MSTB	LTR/ERVL-MaLR	(81)	345	1	57749
26	0.0	0.0	0.0	chr1	30111432	30111456	(218844966)	+	(AAT)n	Simple_repeat	1	25	(0)	57863
413	33.5	15.3	3.1	chr1	30701133	30702404	(218254018)	+	L2b	LINE/L2	1396	2851	(568)	58874
34	24.9	3.8	0.9	chr1	30727879	30727984	(218228438)	+	(TCTC)n	Simple_repeat	1	110	(0)	58929
336	22.9	18.0	0.0	chr1	30779866	30779970	(218176452)	+	MIRb	SINE/MIR	91	218	(50)	59046
182	27.6	2.6	0.0	chr1	30816540	30816615	(218139807)	+	L2b	LINE/L2	3007	3084	(291)	59140
516	25.2	3.8	0.0	chr1	30816738	30816864	(218139558)	+	MIRb	SINE/MIR	5	136	(132)	59141
31	14.8	4.4	7.6	chr1	30895825	30895937	(218060485)	+	GA-rich	Low_complexity	1	118	(0)	59322
566	24.3	16.8	0.0	chr1	30913937	30914080	(218042342)	C	Arthur1A	DNA/hAT-Tip100	(4)	173	1	59376
431	28.8	14.6	0.5	chr1	30929733	30929955	(218026467)	+	MIRc	SINE/MIR	4	263	(5)	59418
51	30.6	2.7	3.0	chr1	31154953	31155209	(217801213)	+	G-rich	Low_complexity	1	264	(0)	59976
256	26.3	3.8	2.6	chr1	31215980	31216057	(217740365)	C	MIR	SINE/MIR	(169)	93	15	60146
19	17.9	2.4	8.3	chr1	31239969	31240050	(217716372)	+	G-rich	Low_complexity	1	84	(0)	60224
869	24.4	3.5	1.3	chr1	31240054	31240277	(217716145)	+	MIRb	SINE/MIR	3	231	(37)	60225
282	12.8	0.0	0.0	chr1	31378560	31378598	(217577824)	C	5S	rRNA	(82)	39	1	60537
17	19.9	4.3	0.0	chr1	31431078	31431124	(217525298)	+	(CCTCT)n	Simple_repeat	1	49	(0)	60674
1792	14.4	4.0	3.7	chr1	31431126	31431423	(217524999)	C	AluJr	SINE/Alu	(13)	299	1	60675
34543	23.0	2.2	2.1	chr1	31459371	31466684	(217489738)	+	HERVIP10F-int	LTR/ERV1	490	7737	(0)	60729
490	26.9	0.9	0.0	chr1	31511257	31511360	(217445062)	+	MER81	DNA/hAT-Blackjack	2	106	(8)	60814
12	9.5	0.0	4.0	chr1	31511361	31511385	(217445037)	+	(GGAG)n	Simple_repeat	1	25	(0)	60815
496	23.2	22.3	4.1	chr1	31549245	31549608	(217406814)	C	L2a	LINE/L2	(1)	3425	2977	60884
12	23.6	2.0	4.0	chr1	31617621	31617669	(217338753)	+	(CCCG)n	Simple_repeat	1	50	(0)	61031
808	29.0	2.1	3.8	chr1	31711894	31712133	(217244289)	+	MIRb	SINE/MIR	9	244	(24)	61193
199	31.9	8.4	4.1	chr1	31712362	31712508	(217243914)	+	L2c	LINE/L2	3233	3386	(1)	61194
206	34.6	4.3	0.8	chr1	31748201	31748334	(217208088)	C	MIRb	SINE/MIR	(46)	222	84	61248
196	25.0	3.6	4.8	chr1	31748469	31748552	(217207870)	C	L2b	LINE/L2	(2)	3373	3291	61249
2191	11.7	0.0	0.0	chr1	32025293	32025600	(216930822)	C	AluSx	SINE/Alu	(0)	312	1	61901
40	25.6	2.3	2.9	chr1	32025645	32025777	(216930645)	+	(CTTC)n	Simple_repeat	1	136	(0)	61902
1493	16.5	0.0	4.4	chr1	32025782	32025927	(216930495)	C	AluJr	SINE/Alu	(52)	260	123	61903
18	16.8	2.5	0.0	chr1	32200281	32200320	(216756102)	+	(CTG)n	Simple_repeat	1	41	(0)	62301
22	11.8	2.7	0.0	chr1	32200326	32200362	(216756060)	+	(TC)n	Simple_repeat	1	38	(0)	62302
258	29.5	11.0	2.7	chr1	32221376	32221525	(216734897)	+	L2b	LINE/L2	3055	3218	(157)	62332
12	5.6	0.0	0.0	chr1	32248794	32248812	(216707610)	+	(GGA)n	Simple_repeat	1	19	(0)	62401
768	14.3	1.8	0.0	chr1	32264388	32264499	(216691923)	+	FLAM_A	SINE/Alu	13	126	(16)	62454
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
34002	7.4	6.1	4.9	chr1	32447430	32448197	(216508225)	C	HERVIP10FH-int	LTR/ERV1	(3988)	1114	214	62853
266	18.8	2.0	0.0	chr1	32722091	32722138	(216234284)	C	MIR3	SINE/MIR	(51)	157	109	63577
932	16.5	7.7	0.6	chr1	32722261	32722418	(216234004)	+	FRAM	SINE/Alu	6	175	(1)	63578
223	35.0	1.2	10.6	chr1	32761597	32761775	(216194647)	+	MIRb	SINE/MIR	104	265	(3)	63678
17	10.1	3.1	0.0	chr1	32767965	32767996	(216188426)	+	(TCCCC)n	Simple_repeat	1	33	(0)	63692
277	32.1	6.2	5.2	chr1	32768080	32768253	(216188169)	+	MIR3	SINE/MIR	6	181	(27)	63693
687	28.2	13.2	1.3	chr1	32871504	32871727	(216084695)	C	MIRb	SINE/MIR	(18)	250	1	63923
2689	4.2	0.0	0.7	chr1	32963434	32963743	(215992679)	+	AluSx1	SINE/Alu	1	308	(4)	64112
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
212	28.2	10.0	0.0	chr1	33161212	33161328	(215795094)	C	L2c	LINE/L2	(232)	3155	3026	64572
24	9.7	0.0	6.0	chr1	33257392	33257441	(215698981)	+	(TTTC)n	Simple_repeat	1	50	(0)	64797
920	29.1	5.1	1.9	chr1	33267760	33268130	(215688292)	C	L1ME4c	LINE/L1	(326)	504	196	64818
619	29.0	14.1	2.4	chr1	33268371	33269010	(215687412)	C	L2c	LINE/L2	(14)	3373	2663	64819
21	22.0	3.8	3.7	chr1	35558991	35559072	(213397350)	+	(TCCC)n	Simple_repeat	1	82	(0)	68978
13	18.8	2.6	2.6	chr1	35563439	35563476	(213392946)	+	GA-rich	Low_complexity	1	39	(0)	68985
390	37.9	1.0	0.5	chr1	35756790	35756988	(213199434)	+	L2c	LINE/L2	2735	2934	(485)	69391
676	24.6	10.8	4.3	chr1	35757066	35757355	(213199067)	+	L2c	LINE/L2	3054	3387	(0)	69391
876	26.6	2.6	5.6	chr1	35868964	35869277	(213087145)	+	L1ME1	LINE/L1	5822	6128	(51)	69661
2421	6.7	2.6	0.0	chr1	35869278	35869576	(213086846)	C	AluSq	SINE/Alu	(6)	307	1	69668
188	33.3	4.9	0.0	chr1	35930475	35930552	(213025870)	C	L2	LINE/L2	(528)	2891	2810	69780
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
270	27.2	0.4	0.6	chr1	36126466	36127190	(212829232)	+	(GT)n	Simple_repeat	1	728	(0)	70184
237	19.1	8.1	5.6	chr1	36236350	36236421	(212720001)	C	MER3	DNA/hAT-Charlie	(135)	74	1	70451
16	30.8	0.0	3.0	chr1	36236451	36236516	(212719906)	+	(CCCTTCC)n	Simple_repeat	1	66	(0)	70452
440	17.4	0.0	0.0	chr1	36236519	36236587	(212719835)	C	AluJb	SINE/Alu	(235)	77	9	70453
12	8.4	0.0	6.9	chr1	36323654	36323682	(212632740)	+	G-rich	Low_complexity	1	29	(0)	70648
20	22.5	0.0	6.6	chr1	36323683	36323720	(212632702)	+	(GGCGG)n	Simple_repeat	14	76	(0)	70647
475	30.6	11.5	1.0	chr1	36323837	36324031	(212632391)	C	MIRb	SINE/MIR	(22)	246	29	70649
182	33.3	0.0	0.0	chr1	36385410	36385460	(212570962)	+	MIRb	SINE/MIR	55	105	(163)	70746
18	16.4	2.4	0.0	chr1	36580682	36580722	(212375700)	+	GA-rich	Low_complexity	1	42	(0)	71174
249	33.6	6.2	0.0	chr1	36582689	36582810	(212373612)	+	L3b	LINE/CR1	4947	5076	(156)	71181
318	31.4	7.9	2.3	chr1	36582870	36583110	(212373312)	C	L1ME3G	LINE/L1	(0)	924	729	71182
332	29.3	18.0	4.1	chr1	36590646	36590887	(212365535)	C	LTR78	LTR/ERV1	(1)	1303	1021	71197
256	33.8	13.0	0.0	chr1	36591113	36591266	(212365156)	C	LTR78	LTR/ERV1	(691)	613	437	71197
705	25.1	5.3	4.8	chr1	36689033	36689318	(212267104)	C	LTR16C	LTR/ERVL	(87)	451	149	71379
429	26.0	19.4	2.6	chr1	36947540	36947847	(212008575)	+	L2a	LINE/L2	3055	3426	(0)	71834
53	18.2	2.0	4.7	chr1	37452919	37453064	(211503358)	+	(CTCCT)n	Simple_repeat	1	149	(0)	72760
37	32.3	0.7	1.4	chr1	37474624	37474766	(211481656)	+	GA-rich	Low_complexity	1	144	(0)	72810
11	27.7	0.0	0.0	chr1	37480126	37480164	(211476258)	+	G-rich	Low_complexity	1	39	(0)	72818
12	10.2	0.0	10.3	chr1	37514263	37514301	(211442121)	+	(TCCCCC)n	Simple_repeat	1	39	(0)	72892
16	20.8	2.6	7.6	chr1	37514389	37514465	(211441957)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	72893
12	16.0	0.0	3.3	chr1	37514529	37514558	(211441864)	+	(CGCCG)n	Simple_repeat	1	30	(0)	72894
14	21.2	0.0	9.2	chr1	38006211	38006275	(210950147)	+	G-rich	Low_complexity	1	65	(0)	73900
12	8.1	3.6	3.5	chr1	38006427	38006454	(210949968)	+	GA-rich	Low_complexity	1	29	(0)	73901
225	24.2	0.0	5.7	chr1	38050959	38051028	(210905394)	C	LFSINE_Vert	SINE/tRNA	(286)	173	108	73980
275	32.6	2.1	0.0	chr1	38076052	38076146	(210880276)	+	MIR3	SINE/MIR	82	178	(30)	74035
269	34.0	3.6	0.0	chr1	38076336	38076441	(210879981)	C	MIRb	SINE/MIR	(6)	262	153	74036
606	28.6	3.1	2.1	chr1	38132906	38133094	(210823328)	+	MIRb	SINE/MIR	1	191	(77)	74145
236	33.5	7.2	4.3	chr1	38139259	38139420	(210817002)	+	MIR3	SINE/MIR	17	183	(25)	74150
354	32.2	2.8	5.0	chr1	38785349	38785567	(210170855)	C	MamRep434	DNA/TcMar-Tigger	(154)	272	59	75329
2233	8.3	0.7	0.7	chr1	39051780	39052068	(209904354)	C	AluSx4	SINE/Alu	(20)	290	2	75960
6199	20.5	8.8	4.4	chr1	39052069	39052520	(209903902)	+	L1MD2	LINE/L1	1855	2293	(4340)	75954
18	6.5	2.9	2.9	chr1	39105322	39105355	(209851067)	+	(GCC)n	Simple_repeat	1	35	(0)	76100
1894	12.6	4.3	0.4	chr1	39194374	39194642	(209761780)	C	AluSx	SINE/Alu	(32)	280	1	76281
32	2.9	0.0	0.0	chr1	39194674	39194708	(209761714)	+	(CTCCC)n	Simple_repeat	1	35	(0)	76282
1731	17.4	0.0	0.7	chr1	39194718	39194993	(209761429)	C	AluJr4	SINE/Alu	(38)	274	1	76283
14	14.1	7.7	0.0	chr1	39409005	39409043	(209547379)	+	(GGCGC)n	Simple_repeat	1	42	(0)	76679
12	19.7	2.3	4.4	chr1	39409058	39409101	(209547321)	+	(AGCC)n	Simple_repeat	1	45	(0)	76680
17	22.4	7.4	2.3	chr1	39646262	39646342	(209310080)	+	(CCT)n	Simple_repeat	1	87	(0)	77130
255	29.3	20.1	1.8	chr1	39670736	39671010	(209285412)	+	L2b	LINE/L2	3028	3365	(10)	77175
16	8.7	0.0	0.0	chr1	39672236	39672260	(209284162)	+	(GCT)n	Simple_repeat	1	25	(0)	77178
13	10.0	0.0	0.0	chr1	39689897	39689918	(209266504)	+	(AGC)n	Simple_repeat	1	22	(0)	77209
13	14.2	3.2	0.0	chr1	39691218	39691248	(209265174)	+	G-rich	Low_complexity	1	32	(0)	77212
460	32.4	4.1	1.2	chr1	39704504	39704775	(209251647)	C	L1ME4a	LINE/L1	(286)	5838	5602	77244
324	25.0	0.0	2.2	chr1	39704791	39704880	(209251542)	C	L1ME4b	LINE/L1	(11)	881	794	77245
227	30.4	16.1	4.2	chr1	39704943	39705062	(209251360)	C	L1ME4a	LINE/L1	(508)	5616	5480	77244
1092	18.1	7.7	7.4	chr1	39738529	39738618	(209217804)	C	MER58B	DNA/hAT-Charlie	(218)	123	39	77323
511	24.8	21.2	2.5	chr1	39973768	39974007	(208982415)	C	L2a	LINE/L2	(1)	3425	3129	77819
13	23.1	1.8	5.3	chr1	40373648	40373703	(208582719)	+	G-rich	Low_complexity	1	57	(0)	78695
1983	15.2	0.0	1.6	chr1	40383891	40384199	(208572223)	C	AluSz6	SINE/Alu	(6)	306	3	78712
13	3.6	2.9	8.6	chr1	40665612	40665645	(208290777)	+	(GCTCC)n	Simple_repeat	1	35	(0)	79269
14	8.9	0.0	0.0	chr1	40782511	40782534	(208173888)	+	(CCCT)n	Simple_repeat	1	24	(0)	79494
829	21.1	7.7	0.0	chr1	41622484	41622663	(207333759)	+	MER58A	DNA/hAT-Charlie	30	224	(0)	81098
535	19.3	0.0	0.0	chr1	41672873	41672986	(207283436)	C	MER121	DNA/hAT?	(187)	214	101	81203
208	34.5	1.2	0.0	chr1	41712645	41712728	(207243694)	C	MIR1_Amn	SINE/MIR	(117)	113	29	81293
760	32.3	4.2	5.9	chr1	41771311	41771662	(207184760)	C	LTR78	LTR/ERV1	(164)	1140	794	81407
2199	9.9	1.3	0.3	chr1	41771663	41771964	(207184458)	C	AluSx3	SINE/Alu	(6)	305	1	81412
1341	24.8	11.2	2.0	chr1	41830423	41830817	(207125605)	+	LTR16	LTR/ERVL	1	436	(2)	81533
579	30.3	9.9	1.2	chr1	41830865	41831205	(207125217)	+	L2a	LINE/L2	3053	3426	(0)	81534
2025	13.3	1.7	0.0	chr1	41885384	41885676	(207070746)	+	AluSz	SINE/Alu	1	298	(14)	81618
35	0.0	0.0	0.0	chr1	42166116	42166145	(206790277)	+	(GT)n	Simple_repeat	1	30	(0)	82036
12	16.2	10.0	1.8	chr1	42380640	42380689	(206575733)	+	(CCCG)n	Simple_repeat	1	55	(0)	82411
251	30.5	9.2	1.5	chr1	42420749	42420878	(206535544)	+	MIRc	SINE/MIR	3	143	(125)	82479
363	29.7	5.6	1.7	chr1	42931305	42931424	(206024998)	+	MIR3	SINE/MIR	61	185	(23)	83377
17	10.1	3.1	0.0	chr1	42958185	42958216	(205998206)	+	(GCCGGG)n	Simple_repeat	1	33	(0)	83430
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
17	14.9	0.0	4.9	chr1	43029624	43029664	(205926758)	+	(CCT)n	Simple_repeat	1	41	(0)	83618
206	29.5	4.0	9.5	chr1	43029669	43029773	(205926649)	+	MIR	SINE/MIR	159	257	(5)	83616
287	20.8	8.9	10.0	chr1	43029705	43029784	(205926638)	+	L2a	LINE/L2	3348	3426	(0)	83619
268	25.4	8.0	9.8	chr1	43148207	43148359	(205808063)	C	ORSL-2b	DNA/hAT-Tip100	(16)	492	343	83850
2382	10.3	0.0	0.0	chr1	43318502	43318803	(205637619)	C	AluSz	SINE/Alu	(10)	302	1	84138
1489	16.2	5.4	9.8	chr1	43720248	43720395	(205236027)	+	L1MB8	LINE/L1	5504	5629	(542)	84778
1960	16.7	8.9	0.6	chr1	43720396	43720757	(205235665)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	84782
234	28.8	1.5	0.0	chr1	43836435	43836500	(205119922)	C	L2b	LINE/L2	(20)	3355	3289	85014
14	20.5	1.4	9.3	chr1	43893520	43893593	(205062829)	+	(TCCCT)n	Simple_repeat	1	75	(0)	85115
1160	32.7	13.9	2.1	chr1	43982454	43983742	(204972680)	C	L2c	LINE/L2	(164)	3223	1753	85242
13	21.5	3.4	4.9	chr1	43983817	43983875	(204972547)	+	G-rich	Low_complexity	1	61	(0)	85243
1284	25.2	16.4	1.2	chr1	44076026	44076511	(204879911)	+	LTR16D2	LTR/ERVL	3	569	(3)	85380
12	4.3	8.3	0.0	chr1	44238836	44238859	(204717563)	+	(TCC)n	Simple_repeat	1	26	(0)	85723
35	2.7	0.0	0.0	chr1	44239783	44239820	(204716602)	+	(AGAGGAGGG)n	Simple_repeat	1	38	(0)	85724
715	26.6	20.4	2.2	chr1	44500002	44500615	(204455807)	+	L2a	LINE/L2	2674	3426	(0)	86146
202	21.7	0.0	0.0	chr1	44617723	44617768	(204338654)	C	MIR1_Amn	SINE/MIR	(81)	149	104	86380
2317	9.1	0.3	0.0	chr1	44737338	44737645	(204218777)	+	AluSp	SINE/Alu	1	309	(4)	86606
2161	29.5	7.2	3.5	chr1	44737646	44737809	(204218613)	+	L2a	LINE/L2	2811	2986	(433)	86605
410	18.9	0.0	1.3	chr1	44737836	44737910	(204218512)	+	Alu	SINE/Alu	1	74	(237)	86607
13	6.9	2.8	8.1	chr1	44826775	44826810	(204129612)	+	G-rich	Low_complexity	1	37	(0)	86787
494	24.2	17.8	1.2	chr1	45328447	45328689	(203627733)	C	L1ME3E	LINE/L1	(9)	6233	5942	87746
14	20.7	2.6	0.0	chr1	46171513	46171551	(202784871)	+	(GTGAGG)n	Simple_repeat	1	40	(0)	89481
26	20.5	0.0	4.5	chr1	46173781	46173847	(202782575)	+	(CA)n	Simple_repeat	1	67	(0)	89488
12	4.3	8.3	0.0	chr1	46175632	46175655	(202780767)	+	(GAGGA)n	Simple_repeat	1	26	(0)	89490
13	29.6	4.8	0.0	chr1	46179760	46179822	(202776600)	+	GA-rich	Low_complexity	1	66	(0)	89502
18	22.4	0.0	0.0	chr1	46179929	46179964	(202776458)	+	GA-rich	Low_complexity	1	36	(0)	89503
412	27.4	16.7	1.4	chr1	46181616	46181833	(202774589)	C	L2b	LINE/L2	(2)	3373	3116	89507
184	36.5	6.9	1.3	chr1	46181954	46182103	(202774319)	C	L2b	LINE/L2	(723)	2696	2538	89507
12	17.6	8.9	0.0	chr1	46341238	46341282	(202615140)	+	(CCCTTT)n	Simple_repeat	1	49	(0)	89845
109	16.1	0.0	1.0	chr1	46443286	46443478	(202512944)	+	(CCT)n	Simple_repeat	1	193	(0)	90055
22	14.3	2.1	2.0	chr1	46452895	46452942	(202503480)	+	(TCTG)n	Simple_repeat	1	49	(0)	90077
22	9.2	0.0	0.0	chr1	46488048	46488082	(202468340)	+	(CTCCC)n	Simple_repeat	1	35	(0)	90132
366	31.7	3.4	2.7	chr1	46522311	46522456	(202433966)	+	MIRb	SINE/MIR	73	219	(49)	90190
544	28.8	16.6	0.0	chr1	46523833	46524068	(202432354)	C	L3	LINE/CR1	(10)	4089	3807	90193
186	27.7	0.0	0.0	chr1	46614116	46614162	(202342260)	C	L2c	LINE/L2	(7)	3380	3334	90350
1013	16.2	2.6	2.6	chr1	46719615	46719804	(202236618)	+	MER53	DNA/hAT	1	190	(3)	90533
1085	24.2	16.1	6.3	chr1	46719805	46720209	(202236213)	C	L2a	LINE/L2	(111)	3315	2800	90532
283	29.8	12.4	3.8	chr1	47175585	47175786	(201780636)	C	MIR	SINE/MIR	(50)	218	4	91038
435	29.7	8.1	0.7	chr1	47243815	47243963	(201712459)	+	MIR3	SINE/MIR	33	193	(15)	91157
890	22.8	6.3	2.5	chr1	47407879	47408076	(201548346)	C	MER63A	DNA/hAT-Blackjack	(1)	209	4	91539
194	27.3	3.0	1.6	chr1	47408204	47408296	(201548126)	C	MIRc	SINE/MIR	(54)	176	81	91540
13	8.4	0.0	6.9	chr1	47431664	47431692	(201524730)	+	(GGT)n	Simple_repeat	1	29	(0)	91592
203	24.4	15.3	1.9	chr1	47507569	47507677	(201448745)	C	MIR	SINE/MIR	(3)	259	127	91743
221	19.3	6.6	9.5	chr1	47507684	47507746	(201448676)	C	MIR3	SINE/MIR	(130)	78	18	91744
595	23.7	14.1	2.2	chr1	47564634	47564930	(201391492)	+	MamGypLTR1c	LTR/Gypsy	64	444	(369)	91869
14	13.4	5.9	0.0	chr1	47685242	47685275	(201271147)	+	GA-rich	Low_complexity	1	36	(0)	92113
14	13.7	3.1	0.0	chr1	47720430	47720461	(201235961)	+	(CCTCCC)n	Simple_repeat	1	33	(0)	92178
399	27.9	6.4	6.9	chr1	47720566	47720738	(201235684)	C	L2c	LINE/L2	(1)	3386	3215	92179
235	33.1	7.3	6.7	chr1	47841481	47841629	(201114793)	C	L2b	LINE/L2	(1)	3374	3225	92401
2197	11.4	3.9	0.7	chr1	47841773	47842071	(201114351)	C	AluSg7	SINE/Alu	(0)	309	1	92402
23	15.8	2.0	0.0	chr1	47997587	47997635	(200958787)	+	(CGCT)n	Simple_repeat	1	50	(0)	92702
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
510	30.5	2.8	1.1	chr1	48004343	48004519	(200951903)	+	MIRb	SINE/MIR	6	179	(83)	92718
226	31.9	5.0	4.2	chr1	48084591	48084708	(200871714)	+	MIR3	SINE/MIR	6	124	(84)	92882
12	27.4	4.1	0.0	chr1	48472079	48472127	(200484295)	+	(GGC)n	Simple_repeat	1	51	(0)	93355
2159	12.0	0.0	0.0	chr1	48603190	48603481	(200352941)	+	AluSc5	SINE/Alu	1	292	(17)	93620
421	36.8	5.0	6.2	chr1	48603482	48603781	(200352641)	C	L2c	LINE/L2	(419)	3000	2700	93619
341	21.0	11.8	4.9	chr1	51305410	51305627	(197650795)	+	L2b	LINE/L2	3016	3255	(120)	98399
514	21.2	16.7	2.9	chr1	51305631	51305800	(197650622)	C	MER63A	DNA/hAT-Blackjack	(10)	200	3	98403
15	14.1	1.7	10.2	chr1	51519284	51519341	(197437081)	+	G-rich	Low_complexity	1	59	(0)	98833
891	25.8	6.8	7.6	chr1	51671495	51671851	(197284571)	C	L2a	LINE/L2	(0)	3426	3073	99231
1286	24.7	6.1	4.8	chr1	51671962	51672335	(197284087)	C	L2a	LINE/L2	(405)	3014	2636	99231
25	40.8	4.6	0.5	chr1	51741372	51741565	(197214857)	+	(TCTC)n	Simple_repeat	1	203	(0)	99358
273	12.5	9.4	0.0	chr1	51741566	51741613	(197214809)	C	AluJo	SINE/Alu	(12)	300	248	99359
12	23.2	0.0	4.5	chr1	51878751	51878794	(197077628)	+	(CCCTCCG)n	Simple_repeat	1	44	(0)	99630
4457	11.8	0.6	6.3	chr1	52007212	52007896	(196948526)	C	LTR8	LTR/ERV1	(40)	651	2	99953
461	25.9	5.9	4.6	chr1	52068423	52068619	(196887803)	C	MIRb	SINE/MIR	(61)	207	6	100103
239	32.7	1.9	11.1	chr1	52068820	52068991	(196887431)	+	L2c	LINE/L2	3106	3261	(126)	100104
12	18.7	4.3	4.2	chr1	52366414	52366459	(196589963)	+	(CTCG)n	Simple_repeat	1	48	(0)	100700
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
806	30.2	15.9	6.9	chr1	53053612	53054419	(195902003)	C	L2c	LINE/L2	(611)	2808	1915	102366
241	30.6	16.2	4.8	chr1	53054503	53054791	(195901631)	+	L2c	LINE/L2	3042	3369	(18)	102368
266	33.2	14.0	4.5	chr1	53196369	53196567	(195759855)	C	MIRb	SINE/MIR	(9)	259	39	102642
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
16	10.8	0.0	3.1	chr1	53220667	53220698	(195735724)	+	(GGCCGG)n	Simple_repeat	1	32	(0)	102674
4516	18.0	3.0	1.4	chr1	53448030	53448912	(195507510)	C	MER21C	LTR/ERVL	(40)	898	1	103102
850	32.1	9.9	2.3	chr1	53477198	53477617	(195478805)	C	ERVL-E-int	LTR/ERVL	(444)	5223	4780	103158
1228	26.2	6.7	3.2	chr1	53477618	53478089	(195478333)	C	LTR16A2	LTR/ERVL	(3)	492	3	103159
493	27.6	2.0	7.0	chr1	53504279	53504393	(195452029)	+	MIR	SINE/MIR	2	119	(143)	103210
13	12.7	0.0	0.0	chr1	53509477	53509502	(195446920)	+	(GGGAG)n	Simple_repeat	1	26	(0)	103218
250	32.2	7.6	4.7	chr1	53541727	53541853	(195414569)	C	MIRc	SINE/MIR	(45)	223	93	103283
258	30.6	0.0	0.0	chr1	54249820	54249891	(194706531)	C	MIR	SINE/MIR	(80)	182	111	104741
298	25.4	5.8	2.6	chr1	54273678	54273794	(194682628)	C	MIR3	SINE/MIR	(55)	153	33	104776
348	29.4	6.9	4.5	chr1	54342595	54342792	(194613630)	+	MIRc	SINE/MIR	2	222	(46)	104895
243	24.1	15.3	4.1	chr1	54377402	54377522	(194578900)	C	MIRc	SINE/MIR	(85)	183	47	104956
967	23.9	7.7	1.8	chr1	54377610	54377950	(194578472)	+	Kanga2_a	DNA/TcMar-Tc2	389	751	(137)	104957
366	32.8	10.6	3.8	chr1	54409151	54409467	(194546955)	+	L2c	LINE/L2	3034	3374	(13)	105004
203	28.3	2.6	8.9	chr1	54463373	54463496	(194492926)	+	MIR3	SINE/MIR	21	136	(72)	105137
13	22.4	0.0	4.4	chr1	54488682	54488726	(194467696)	+	G-rich	Low_complexity	1	45	(0)	105195
30	27.2	5.3	2.1	chr1	54572136	54572268	(194384154)	+	(CT)n	Simple_repeat	1	140	(0)	105401
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
33	5.6	0.0	0.0	chr1	56191954	56191990	(192764432)	+	(AC)n	Simple_repeat	1	37	(0)	108354
217	28.3	5.2	7.2	chr1	56437243	56437478	(192518944)	+	L2c	LINE/L2	2932	3162	(225)	108817
641	20.3	0.8	1.6	chr1	56521569	56521691	(192434731)	C	FLAM_C	SINE/Alu	(11)	132	11	109011
18	28.2	2.7	2.7	chr1	56521708	56521780	(192434642)	+	(CTCC)n	Simple_repeat	1	75	(0)	109012
574	24.4	2.2	4.9	chr1	56531688	56531872	(192424550)	+	MIRb	SINE/MIR	27	206	(62)	109029
249	29.2	8.0	3.2	chr1	56532748	56532944	(192423478)	C	L2c	LINE/L2	(9)	3378	3148	109030
1880	13.2	0.0	0.0	chr1	56533054	56533311	(192423111)	C	AluSz	SINE/Alu	(11)	301	44	109031
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
14	19.4	2.3	2.3	chr1	58546475	58546517	(190409905)	+	(TCCCC)n	Simple_repeat	1	44	(0)	113060
13	13.2	0.0	0.0	chr1	58799211	58799235	(190157187)	+	(TCCC)n	Simple_repeat	1	25	(0)	113541
243	29.2	3.1	0.4	chr1	58799272	58799368	(190157054)	+	L2c	LINE/L2	3230	3352	(35)	113542
2023	18.2	12.3	4.4	chr1	59095708	59096184	(189860238)	+	MLT2B1	LTR/ERVL	1	520	(0)	114189
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
417	30.6	8.5	5.0	chr1	59354641	59355188	(189601234)	C	L2a	LINE/L2	(5)	3421	2772	114727
213	25.8	18.5	3.6	chr1	61014807	61014943	(187941479)	+	L2a	LINE/L2	3237	3398	(28)	117512
15	19.2	4.1	2.0	chr1	61050196	61050245	(187906177)	+	(CCCTCT)n	Simple_repeat	1	51	(0)	117591
2402	5.9	3.3	0.0	chr1	61057625	61057914	(187898508)	C	AluSq2	SINE/Alu	(13)	300	1	117599
12	15.8	0.0	3.3	chr1	61057943	61057972	(187898450)	+	(CCTC)n	Simple_repeat	1	30	(0)	117600
18	8.7	0.0	0.0	chr1	61077842	61077866	(187878556)	+	(T)n	Simple_repeat	1	25	(0)	117646
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
185	32.8	11.5	5.7	chr1	61259372	61259633	(187696789)	C	L2c	LINE/L2	(1)	3386	3108	117876
78	6.6	3.6	0.0	chr1	61588982	61589093	(187367329)	+	(TC)n	Simple_repeat	1	116	(0)	118399
16	19.3	0.0	8.1	chr1	61742354	61742415	(187214007)	+	(CCCGCCC)n	Simple_repeat	1	62	(0)	118746
13	25.7	2.2	0.0	chr1	62488296	62488341	(186468081)	+	(TTAATT)n	Simple_repeat	1	47	(0)	120335
33	20.8	1.0	5.0	chr1	62621105	62621203	(186335219)	+	GA-rich	Low_complexity	1	100	(0)	120535
5045	21.1	3.2	7.5	chr1	62673782	62675132	(186281290)	+	L1MB7	LINE/L1	4017	5310	(836)	120611
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
12	12.1	10.0	4.5	chr1	62717757	62717777	(186238645)	+	(CCTTCT)n	Simple_repeat	1	22	(0)	120689
28	5.8	0.0	0.0	chr1	62717778	62717813	(186238609)	+	(TCCCC)n	Simple_repeat	1	36	(0)	120690
12	12.1	10.0	4.5	chr1	62717814	62717851	(186238571)	+	(CCTTCT)n	Simple_repeat	5	44	(0)	120691
822	33.6	11.1	3.2	chr1	63405242	63405653	(185550769)	C	L3	LINE/CR1	(55)	4044	3596	122021
253	25.0	1.4	4.2	chr1	63773658	63773728	(185182694)	C	MIR3	SINE/MIR	(109)	99	31	122678
225	24.1	11.3	0.2	chr1	63773691	63773791	(185182631)	+	MIR3	SINE/MIR	38	149	(81)	122679
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
1776	12.7	11.5	8.0	chr1	64247884	64248093	(184708329)	+	MSTB1	LTR/ERVL-MaLR	203	432	(0)	123546
21	20.7	6.9	0.0	chr1	64505523	64505594	(184450828)	+	(CCGCC)n	Simple_repeat	1	77	(0)	124010
347	23.8	11.6	0.0	chr1	64506310	64506393	(184450029)	C	MIRb	SINE/MIR	(2)	266	172	124013
630	25.3	8.2	1.6	chr1	64506405	64506597	(184449825)	C	MIR	SINE/MIR	(16)	246	40	124014
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	18.9	2.8	0.0	chr1	64745015	64745050	(184211372)	+	(CCTCCTC)n	Simple_repeat	1	37	(0)	124431
25	25.0	3.5	1.1	chr1	64745175	64745261	(184211161)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	124432
216	25.3	12.0	3.1	chr1	64955148	64955245	(184001177)	C	L2c	LINE/L2	(5)	3382	3275	124782
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
18	0.0	0.0	0.0	chr1	65067782	65067801	(183888621)	+	(A)n	Simple_repeat	1	20	(0)	125017
20	16.0	0.0	0.0	chr1	65067870	65067904	(183888518)	+	(TG)n	Simple_repeat	1	35	(0)	125018
18	21.5	0.0	0.0	chr1	65148145	65148187	(183808235)	+	GA-rich	Low_complexity	1	43	(0)	125212
12	22.0	2.7	0.0	chr1	65148891	65148927	(183807495)	+	(CCGTACC)n	Simple_repeat	1	38	(0)	125213
435	29.1	10.0	3.3	chr1	65173876	65173998	(183782424)	C	LTR85c	LTR/Gypsy?	(300)	523	388	125270
388	32.8	5.3	6.2	chr1	65278657	65278848	(183677574)	C	MIR3	SINE/MIR	(5)	203	14	125483
28	13.7	0.0	4.8	chr1	65310202	65310263	(183646159)	+	G-rich	Low_complexity	1	62	(0)	125554
482	26.4	14.2	0.0	chr1	66543679	66543860	(182412562)	+	MIRc	SINE/MIR	2	213	(55)	127377
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
18	34.0	0.0	0.0	chr1	68232582	68232644	(180723778)	+	(CCTT)n	Simple_repeat	1	63	(0)	130268
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
319	26.0	11.8	2.3	chr1	70444191	70444320	(178512102)	C	LTR16A1	LTR/ERVL	(154)	302	159	133443
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
11686	18.6	2.3	2.3	chr1	75373127	75375824	(173580598)	+	L1PA17	LINE/L1	4	2730	(4205)	139866
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
19	11.7	0.0	4.9	chr1	76041614	76041654	(172914768)	+	(TTTTG)n	Simple_repeat	1	41	(0)	140840
19	18.2	2.2	0.0	chr1	76041799	76041843	(172914579)	+	A-rich	Low_complexity	1	46	(0)	140841
474	25.8	11.2	1.2	chr1	76095532	76095692	(172860730)	+	MIRb	SINE/MIR	90	268	(0)	140937
181	23.4	13.5	0.0	chr1	76095889	76095952	(172860470)	+	L3	LINE/CR1	3129	3202	(897)	140938
2264	17.1	2.6	1.7	chr1	76239342	76239763	(172716659)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	141149
2225	18.5	2.1	1.2	chr1	76241206	76241631	(172714791)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	1	141155
1346	18.1	3.4	3.1	chr1	76241632	76241897	(172714525)	+	MER33	DNA/hAT-Charlie	50	320	(4)	141154
10022	13.4	1.8	1.6	chr1	76246589	76248264	(172708158)	C	L1PA8	LINE/L1	(4773)	1688	10	141157
1041	31.3	8.3	1.8	chr1	77553175	77553728	(171402694)	+	LTR101_Mam	LTR/ERVL	1	593	(236)	143094
928	15.0	3.8	0.0	chr1	77553964	77554116	(171402306)	+	L1MB8	LINE/L1	5801	5959	(219)	143095
12656	15.4	4.8	0.9	chr1	77604960	77607065	(171349357)	+	L1MA9	LINE/L1	11	2200	(5365)	143172
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
16	0.0	0.0	0.0	chr1	77779447	77779464	(171176958)	+	(T)n	Simple_repeat	1	18	(0)	143483
27	20.1	0.0	0.0	chr1	81238293	81238344	(167718078)	+	(TC)n	Simple_repeat	1	52	(0)	148177
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
16	15.8	0.0	2.7	chr1	81834312	81834317	(167122105)	+	(TTTTTG)n	Simple_repeat	1	36	(0)	149060
13	10.7	6.7	0.0	chr1	81834318	81834347	(167122075)	+	(GTTTT)n	Simple_repeat	1	32	(0)	149061
13	14.7	3.3	0.0	chr1	84506304	84506333	(164450089)	+	GA-rich	Low_complexity	1	31	(0)	152616
20	3.6	3.2	3.1	chr1	85049810	85049840	(163906582)	+	(GA)n	Simple_repeat	1	32	(0)	153509
2495	10.8	6.6	2.7	chr1	85049842	85050290	(163906132)	C	LTR21A	LTR/ERV1	(13)	468	1	153510
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
17	11.3	0.0	0.0	chr1	85201664	85201692	(163754730)	+	(GCG)n	Simple_repeat	1	29	(0)	153785
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
309	24.2	13.9	5.8	chr1	85275153	85275323	(163681099)	+	L2a	LINE/L2	3234	3420	(6)	153915
20	0.0	0.0	0.0	chr1	85464590	85464611	(163491811)	+	(AC)n	Simple_repeat	1	22	(0)	154198
16	13.2	0.0	0.0	chr1	85579985	85580009	(163376413)	+	(C)n	Simple_repeat	1	25	(0)	154402
699	30.3	2.7	10.4	chr1	86713605	86714009	(162242413)	+	L2a	LINE/L2	3053	3425	(1)	155979
2482	20.2	5.8	4.7	chr1	86933161	86934645	(162021777)	C	L1MCb	LINE/L1	(5123)	1628	331	156357
20	7.7	15.3	2.4	chr1	87328746	87328817	(161627605)	+	(GAGC)n	Simple_repeat	1	83	(0)	156907
21	29.0	2.6	3.1	chr1	87328818	87328847	(161627575)	+	G-rich	Low_complexity	3	103	(0)	156908
794	21.1	5.7	0.0	chr1	87595415	87595580	(161360842)	C	MER45A	DNA/hAT-Tip100	(1)	177	2	157268
75	24.4	1.2	4.5	chr1	87595592	87595832	(161360590)	+	(TCCC)n	Simple_repeat	1	244	(0)	157269
21	23.3	0.0	0.0	chr1	88683885	88683929	(160272493)	+	A-rich	Low_complexity	1	45	(0)	158815
20	17.4	0.0	0.0	chr1	88685229	88685267	(160271155)	+	(T)n	Simple_repeat	1	39	(0)	158817
4388	17.9	4.0	4.1	chr1	89360537	89361685	(159594737)	C	L1MA10	LINE/L1	(1)	6333	4654	159767
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
15	10.3	9.1	2.1	chr1	89524730	89524791	(159431631)	+	(CCGCCT)n	Simple_repeat	1	66	(0)	159967
29	11.8	3.4	1.6	chr1	89696463	89696521	(159259901)	+	G-rich	Low_complexity	1	61	(0)	160200
22	5.8	0.0	5.0	chr1	89999333	89999372	(158957050)	+	(AGGGAG)n	Simple_repeat	1	40	(0)	160690
526	22.1	2.6	2.0	chr1	91402033	91402184	(157554238)	+	MamRep564	Unknown	132	284	(73)	162667
272	20.7	1.7	1.7	chr1	91734628	91734686	(157221736)	+	Plat_L3	LINE/CR1	3525	3583	(3)	163165
448	26.5	3.3	0.0	chr1	91885013	91885129	(157071293)	C	MIR	SINE/MIR	(22)	240	120	163407
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
274	33.9	12.1	10.7	chr1	93178337	93178646	(155777776)	+	L2b	LINE/L2	3045	3359	(16)	165851
248	29.9	14.4	1.3	chr1	93178662	93178739	(155777683)	+	MIR3	SINE/MIR	32	121	(87)	165852
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
14	15.4	6.7	2.1	chr1	93680930	93680974	(155275448)	+	(CCTTC)n	Simple_repeat	1	48	(0)	166665
305	28.0	3.3	2.5	chr1	93848110	93848230	(155108192)	C	MER5A	DNA/hAT-Charlie	(16)	173	52	166927
23	20.4	0.0	4.7	chr1	94116939	94116955	(154839467)	+	(CCCT)n	Simple_repeat	1	17	(0)	167312
89	0.0	3.6	3.5	chr1	94116956	94117065	(154839357)	+	(CTTT)n	Simple_repeat	1	114	(0)	167313
23	20.4	0.0	4.7	chr1	94117066	94117111	(154839311)	+	(CCCT)n	Simple_repeat	2	45	(0)	167314
11	17.3	0.0	5.6	chr1	94419001	94419036	(154537386)	+	G-rich	Low_complexity	1	36	(0)	167759
2018	25.6	12.7	6.0	chr1	94818824	94819777	(154136645)	C	L1MEh	LINE/L1	(952)	1456	430	168357
399	23.4	6.6	3.0	chr1	94819786	94819917	(154136505)	+	MIR	SINE/MIR	21	157	(105)	168364
257	37.7	10.0	2.3	chr1	94919997	94920436	(154035986)	+	L3	LINE/CR1	1317	1794	(2305)	168503
14	14.7	0.0	3.1	chr1	94925906	94925937	(154030485)	+	GA-rich	Low_complexity	1	32	(0)	168514
13	23.7	1.9	3.7	chr1	94927275	94927327	(154029095)	+	(CCCGCC)n	Simple_repeat	1	54	(0)	168517
1588	29.7	11.0	1.4	chr1	95044027	95044865	(153911557)	+	L2a	LINE/L2	2486	3425	(1)	168747
1401	17.4	1.5	4.4	chr1	96596140	96596215	(152360207)	C	AluJb	SINE/Alu	(236)	76	1	170882
16	0.0	0.0	0.0	chr1	96596252	96596269	(152360153)	+	(A)n	Simple_repeat	1	18	(0)	170884
312	28.7	9.5	9.1	chr1	96596423	96596652	(152359770)	C	Tigger12	DNA/TcMar-Tigger	(2186)	289	59	170885
16	24.0	0.0	0.0	chr1	96722436	96722479	(152233943)	+	G-rich	Low_complexity	1	44	(0)	171073
15	17.0	0.0	0.0	chr1	98054433	98054465	(150901957)	+	A-rich	Low_complexity	1	33	(0)	172875
13	5.3	0.0	0.0	chr1	99970237	99970256	(148986166)	+	(GGA)n	Simple_repeat	1	20	(0)	175723
146	15.8	4.7	4.4	chr1	100065435	100065575	(148890847)	+	(CCTTTC)n	Simple_repeat	1	141	(0)	175897
26	0.0	0.0	0.0	chr1	100065576	100065600	(148890822)	+	(TTCCC)n	Simple_repeat	1	25	(0)	175898
146	15.8	4.7	4.4	chr1	100065601	100065868	(148890554)	+	(CCTTTC)n	Simple_repeat	6	270	(0)	175899
17	16.1	0.0	0.0	chr1	100538971	100539005	(148417417)	+	(CCACCT)n	Simple_repeat	1	35	(0)	176729
28	14.8	0.0	0.0	chr1	101137025	101137070	(147819352)	+	(TC)n	Simple_repeat	1	46	(0)	177547
21	0.0	0.0	0.0	chr1	108000850	108000872	(140955550)	+	(T)n	Simple_repeat	1	23	(0)	186207
14	8.7	0.0	3.7	chr1	108595707	108595733	(140360689)	+	(AGGG)n	Simple_repeat	1	27	(0)	186976
13	9.6	0.0	0.0	chr1	108595755	108595777	(140360645)	+	(GGAG)n	Simple_repeat	1	23	(0)	186977
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
445	23.2	1.9	1.5	chr1	108963593	108963725	(139992697)	C	Charlie15b	DNA/hAT-Charlie	(16)	1045	926	187650
2223	11.2	0.3	0.6	chr1	109100807	109101119	(139855303)	C	AluJb	SINE/Alu	(0)	312	1	187986
14	9.3	0.0	0.0	chr1	109114125	109114147	(139842275)	+	(CAG)n	Simple_repeat	1	23	(0)	188011
257	24.0	1.3	1.3	chr1	109151173	109151248	(139805174)	+	MER5A	DNA/hAT-Charlie	89	164	(25)	188113
15	8.3	0.0	3.6	chr1	109151315	109151342	(139805080)	+	(AGGG)n	Simple_repeat	1	28	(0)	188114
12	13.9	6.2	0.0	chr1	109213804	109213835	(139742587)	+	(CTCCC)n	Simple_repeat	1	34	(0)	188239
19	11.3	10.2	1.5	chr1	109485229	109485287	(139471135)	+	G-rich	Low_complexity	1	65	(0)	188670
2358	26.0	12.9	3.5	chr1	110001532	110003477	(138952945)	+	L1MC4	LINE/L1	6353	8040	(2)	189415
16	21.9	0.0	6.7	chr1	110211381	110211440	(138744982)	+	(CCGCCT)n	Simple_repeat	1	60	(0)	189743
15	21.8	2.3	0.0	chr1	110243599	110243641	(138712781)	+	GA-rich	Low_complexity	1	44	(0)	189785
17	0.0	0.0	0.0	chr1	110281059	110281079	(138675343)	+	(GTG)n	Simple_repeat	1	21	(0)	189845
14	25.8	0.0	2.3	chr1	110490298	110490341	(138466081)	+	(CTC)n	Simple_repeat	1	44	(0)	190245
12	4.7	4.5	0.0	chr1	111619749	111619770	(137336652)	+	(GCGT)n	Simple_repeat	1	23	(0)	191803
22	24.0	0.0	0.0	chr1	111619785	111619838	(137336584)	+	(CGC)n	Simple_repeat	1	54	(0)	191804
43	2.3	0.0	0.0	chr1	111619876	111619919	(137336503)	+	(GGAGGAGGT)n	Simple_repeat	1	44	(0)	191805
12	8.4	0.0	6.9	chr1	111736994	111737022	(137219400)	+	(TCTG)n	Simple_repeat	1	29	(0)	191990
14	16.1	8.5	3.1	chr1	111948785	111948843	(137007579)	+	GA-rich	Low_complexity	1	64	(0)	192363
25	12.6	0.0	0.0	chr1	111990189	111990231	(136966191)	+	(GTGT)n	Simple_repeat	1	43	(0)	192420
14	31.8	4.0	0.0	chr1	111990232	111990262	(136966160)	+	G-rich	Low_complexity	1	77	(0)	192421
1265	17.4	17.4	2.8	chr1	112630043	112630295	(136326127)	C	AluSx3	SINE/Alu	(12)	299	2	193467
435	30.6	5.6	6.3	chr1	112716048	112716316	(136240106)	C	MIRb	SINE/MIR	(1)	267	1	193632
247	29.8	1.9	5.5	chr1	112850787	112850896	(136105526)	C	L2c	LINE/L2	(14)	3373	3268	193894
223	19.0	0.0	2.3	chr1	112850909	112850951	(136105471)	C	L2b	LINE/L2	(10)	3365	3324	193895
2174	12.2	0.3	0.0	chr1	112851054	112851348	(136105074)	+	AluSx	SINE/Alu	1	296	(16)	193896
596	24.9	12.2	4.7	chr1	113058547	113058701	(135897721)	+	MIR	SINE/MIR	77	250	(12)	194389
11	22.4	3.9	3.8	chr1	113058872	113058922	(135897500)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	194391
47	24.0	0.0	4.8	chr1	113211703	113211849	(135744573)	+	GA-rich	Low_complexity	1	147	(0)	194678
241	30.3	0.0	3.3	chr1	113211918	113212009	(135744413)	C	L2a	LINE/L2	(2)	3424	3336	194679
421	24.3	2.6	5.1	chr1	113792698	113792814	(135163608)	+	AluJb	SINE/Alu	187	300	(12)	195524
20	5.2	7.1	2.2	chr1	113792815	113792856	(135163566)	+	(GGAAG)n	Simple_repeat	1	45	(0)	195525
18	19.6	0.0	3.9	chr1	113929782	113929832	(135026590)	+	G-rich	Low_complexity	1	51	(0)	195812
234	27.6	7.7	9.9	chr1	114043782	114044034	(134912388)	+	L2-1_AMi	LINE/L2	361	607	(628)	195987
12	29.7	2.0	0.0	chr1	114152931	114152979	(134803443)	+	GA-rich	Low_complexity	1	50	(0)	196142
16	23.3	0.0	0.0	chr1	114152988	114153032	(134803390)	+	(C)n	Simple_repeat	1	45	(0)	196143
2412	21.1	6.6	1.6	chr1	114660636	114660831	(134295591)	C	Charlie9	DNA/hAT-Charlie	(1277)	1480	1282	197061
363	31.4	4.7	3.2	chr1	115457308	115457432	(133498990)	C	L2b	LINE/L2	(1)	3374	3248	198211
433	32.3	16.9	2.0	chr1	115969778	115970118	(132986304)	+	L2	LINE/L2	2463	2864	(555)	198996
27	23.7	1.5	0.0	chr1	116273724	116273788	(132682634)	+	(CT)n	Simple_repeat	1	66	(0)	199432
38	4.2	0.0	3.8	chr1	116667517	116667569	(132288853)	+	(CCCGCTC)n	Simple_repeat	1	53	(0)	200066
12	28.6	0.0	6.9	chr1	116667571	116667642	(132288780)	+	(CCCCCG)n	Simple_repeat	1	72	(0)	200067
194	15.4	2.5	0.0	chr1	116687853	116687891	(132268531)	+	L2b	LINE/L2	3334	3373	(2)	200111
2195	11.7	0.0	1.0	chr1	116687976	116688274	(132268148)	+	AluSx1	SINE/Alu	1	296	(16)	200112
29	27.9	0.9	3.6	chr1	116910072	116910182	(132046240)	+	GA-rich	Low_complexity	1	112	(0)	200486
2227	16.5	10.5	11.3	chr1	117045717	117046236	(131910186)	C	MLT2B2	LTR/ERVL	(0)	515	1	200674
213	24.1	1.6	2.8	chr1	117060732	117060815	(131895607)	+	MIR3	SINE/MIR	64	147	(115)	200698
294	35.1	9.7	4.1	chr1	117330827	117331165	(131625257)	+	L2c	LINE/L2	3003	3362	(25)	201152
13	11.9	0.0	6.2	chr1	117331188	117331219	(131625203)	+	(CTTCC)n	Simple_repeat	1	32	(0)	201154
391	26.0	7.1	0.0	chr1	117331226	117331329	(131625093)	C	L2a	LINE/L2	(19)	3407	3296	201155
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
324	30.1	1.2	0.0	chr1	117591734	117591816	(131364606)	+	MIR	SINE/MIR	31	114	(148)	201543
12	13.0	0.0	3.6	chr1	117760555	117760582	(131195840)	+	G-rich	Low_complexity	1	28	(0)	201770
320	27.3	10.8	1.6	chr1	119328190	119328339	(129628083)	+	MamGypLTR3	LTR/Gypsy	724	952	(29)	203975
14	19.8	2.4	2.3	chr1	119711884	119711925	(129244497)	+	GA-rich	Low_complexity	1	43	(0)	204433
13	15.4	5.6	0.0	chr1	119712665	119712700	(129243722)	+	G-rich	Low_complexity	1	38	(0)	204434
1000	7.1	1.2	0.6	chr1	121418421	121418590	(127537832)	C	SVA_A	Retroposon/SVA	(1215)	172	2	207038
233	29.0	4.1	0.0	chr1	145721641	145721733	(103234689)	C	MIRc	SINE/MIR	(135)	133	37	211410
1803	15.7	1.1	2.1	chr1	145852595	145852880	(103103542)	C	AluJr	SINE/Alu	(16)	296	14	211652
412	24.7	0.0	0.0	chr1	145852886	145852966	(103103456)	+	MIRb	SINE/MIR	169	249	(19)	211651
23	12.6	0.0	0.0	chr1	145852982	145853016	(103103406)	+	(CA)n	Simple_repeat	1	35	(0)	211653
13	21.4	2.6	0.0	chr1	145959381	145959418	(102997004)	+	(CCTCATT)n	Simple_repeat	1	39	(0)	211830
18	14.2	0.0	6.5	chr1	145996795	145996840	(102959582)	+	GA-rich	Low_complexity	1	46	(0)	211892
19	12.3	9.4	0.0	chr1	146037713	146037765	(102918657)	+	GA-rich	Low_complexity	1	58	(0)	211992
409	26.4	4.0	0.0	chr1	147245170	147245290	(101711132)	+	LTR67B	LTR/ERVL	72	197	(423)	213843
738	31.8	2.5	1.5	chr1	147245375	147245645	(101710777)	+	LTR67B	LTR/ERVL	345	618	(2)	213843
11032	16.3	3.1	2.2	chr1	147388614	147390776	(101565646)	+	L1P4d	LINE/L1	1	2210	(4725)	214017
20	16.6	6.8	3.9	chr1	147541295	147541367	(101415055)	+	GA-rich	Low_complexity	1	78	(0)	214260
2228	8.9	0.3	0.0	chr1	148335176	148335467	(100620955)	C	AluSx	SINE/Alu	(19)	293	1	215517
28	0.0	0.0	0.0	chr1	150364656	150364681	(98591741)	+	(CCG)n	Simple_repeat	1	26	(0)	218877
12	9.2	0.0	4.0	chr1	150364717	150364741	(98591681)	+	(GGC)n	Simple_repeat	1	25	(0)	218878
16	32.0	1.4	1.4	chr1	150876559	150876629	(98079793)	+	(CGC)n	Simple_repeat	1	72	(0)	220009
453	27.9	5.5	1.3	chr1	150922549	150922572	(98033850)	+	L1ME3G	LINE/L1	5422	5445	(679)	220128
512	27.3	15.1	5.2	chr1	150922573	150922939	(98033483)	+	MLT1I	LTR/ERVL-MaLR	1	410	(1)	220129
15	12.9	5.0	7.9	chr1	150926373	150926432	(98029990)	+	(CTTCCC)n	Simple_repeat	1	63	(0)	220139
16	23.2	0.0	2.1	chr1	151048681	151048727	(97907695)	+	(CACCAC)n	Simple_repeat	1	47	(0)	220394
12	20.4	2.4	2.4	chr1	151071222	151071262	(97885160)	+	G-rich	Low_complexity	1	42	(0)	220420
13	18.3	2.6	2.5	chr1	151254877	151254915	(97701507)	+	G-rich	Low_complexity	1	40	(0)	220826
17	25.7	0.0	0.0	chr1	151282307	151282352	(97674070)	+	(GCG)n	Simple_repeat	1	46	(0)	220903
14	20.6	2.6	0.0	chr1	151284443	151284481	(97671941)	+	(CTCTGT)n	Simple_repeat	1	40	(0)	220905
499	24.6	5.0	0.0	chr1	151315320	151315453	(97640969)	+	MIR3	SINE/MIR	63	203	(5)	220946
49	24.3	1.2	4.1	chr1	151458581	151458747	(97497675)	+	(CCCCCG)n	Simple_repeat	1	169	(0)	221252
53	0.0	0.0	0.0	chr1	151511436	151511483	(97444939)	+	(GCCCGA)n	Simple_repeat	1	48	(0)	221378
190	27.6	6.5	0.0	chr1	151516040	151516097	(97440325)	C	L3	LINE/CR1	(2858)	1241	1180	221385
13	16.9	3.0	0.0	chr1	151516146	151516178	(97440244)	+	(TCCCA)n	Simple_repeat	1	34	(0)	221386
655	31.7	8.4	4.6	chr1	151608253	151608677	(97347745)	+	L2c	LINE/L2	2906	3330	(57)	221587
20	25.3	4.3	0.0	chr1	151612252	151612321	(97344101)	+	(CGG)n	Simple_repeat	1	73	(0)	221596
17	11.5	5.3	0.0	chr1	151716802	151716839	(97239583)	+	(CCTCCCC)n	Simple_repeat	1	40	(0)	221783
265	20.8	21.3	0.0	chr1	151735037	151735132	(97221290)	+	MIR	SINE/MIR	64	185	(77)	221822
2283	7.3	4.5	1.7	chr1	151854391	151854691	(97101731)	C	AluSq2	SINE/Alu	(3)	310	1	221985
362	32.2	2.1	1.4	chr1	153478114	153478322	(95478100)	+	L2a	LINE/L2	2997	3210	(177)	224136
323	24.6	8.2	5.6	chr1	153494735	153494876	(95461546)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	465	224172
13	22.6	0.0	4.4	chr1	153693622	153693666	(95262756)	+	(CACGCA)n	Simple_repeat	1	45	(0)	224552
358	26.0	2.8	0.9	chr1	153698435	153698539	(95257883)	C	MIRc	SINE/MIR	(0)	268	162	224565
2244	11.5	0.0	1.9	chr1	153891287	153891629	(95064793)	+	AluSq	SINE/Alu	2	313	(0)	224991
15	32.7	2.1	4.2	chr1	153891630	153891682	(95064740)	+	G-rich	Low_complexity	10	92	(0)	224992
242	20.8	5.3	2.7	chr1	153891727	153891800	(95064622)	+	L1ME4b	LINE/L1	817	892	(0)	224993
13	13.1	0.0	0.0	chr1	153922689	153922713	(95033709)	+	(CGGG)n	Simple_repeat	1	25	(0)	225074
14	15.6	5.6	0.0	chr1	153922834	153922892	(95033530)	+	G-rich	Low_complexity	1	62	(0)	225075
19	25.9	0.0	4.5	chr1	153958837	153958903	(94997519)	+	GA-rich	Low_complexity	1	67	(0)	225135
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
2306	11.0	0.0	0.0	chr1	154196653	154196952	(94759470)	+	AluSx4	SINE/Alu	1	300	(10)	225650
190	28.6	2.0	0.0	chr1	154197090	154197138	(94759284)	+	L2c	LINE/L2	3247	3296	(91)	225651
12	16.5	0.0	0.0	chr1	154221333	154221378	(94735044)	+	(GAGC)n	Simple_repeat	1	46	(0)	225712
18	24.8	5.6	0.0	chr1	154325451	154325521	(94630901)	+	(GCTCCCC)n	Simple_repeat	1	75	(0)	225936
14	24.9	3.9	0.0	chr1	154325494	154325545	(94630877)	+	(CCGCCG)n	Simple_repeat	1	54	(0)	225937
589	32.2	13.8	5.4	chr1	154353219	154354243	(94602179)	+	L2	LINE/L2	1431	2555	(864)	225966
650	16.3	0.7	15.5	chr1	154444506	154444608	(94511814)	C	Charlie18a	DNA/hAT-Charlie	(70)	272	187	226195
1780	16.4	0.3	2.0	chr1	154444616	154444913	(94511509)	+	AluJo	SINE/Alu	1	293	(19)	226197
37	0.0	0.0	0.0	chr1	154558615	154558648	(94397774)	+	(CCG)n	Simple_repeat	1	34	(0)	226414
17	17.9	2.2	2.1	chr1	154558757	154558802	(94397620)	+	(CCTCCT)n	Simple_repeat	1	47	(0)	226415
1986	9.9	0.0	4.5	chr1	154608330	154608641	(94347781)	C	AluSz	SINE/Alu	(14)	298	1	226476
209	31.6	5.9	0.0	chr1	154609461	154609555	(94346867)	+	L2c	LINE/L2	2981	3081	(306)	226479
263	25.0	9.7	6.7	chr1	154621538	154621777	(94334645)	+	L1M5	LINE/L1	5312	5559	(565)	226507
390	28.1	12.4	10.6	chr1	154765947	154766057	(94190365)	C	L1ME4a	LINE/L1	(5489)	1007	895	226729
247	32.5	17.8	1.2	chr1	154944075	154944242	(94012180)	C	MIRb	SINE/MIR	(52)	216	15	227097
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
17	32.0	3.0	2.9	chr1	155002310	155002409	(93954013)	+	G-rich	Low_complexity	1	103	(0)	227187
26	22.9	0.0	0.0	chr1	155012402	155012462	(93943960)	+	(CTG)n	Simple_repeat	1	61	(0)	227194
13	21.1	2.6	0.0	chr1	155017383	155017420	(93939002)	+	(CCCCT)n	Simple_repeat	1	39	(0)	227201
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
491	27.7	9.9	6.8	chr1	155050162	155050377	(93906045)	+	MIRc	SINE/MIR	3	221	(47)	227263
15	10.4	3.0	2.9	chr1	155070016	155070048	(93886374)	+	GA-rich	Low_complexity	1	34	(0)	227291
30	15.2	1.6	1.6	chr1	155130464	155130526	(93825896)	+	GA-rich	Low_complexity	1	64	(0)	227414
500	19.5	2.3	3.0	chr1	155140262	155140393	(93816029)	+	L1M1	LINE/L1	325	455	(7110)	227424
2392	5.6	0.3	0.3	chr1	155194029	155194314	(93762108)	+	AluSg4	SINE/Alu	6	291	(19)	227524
20	22.8	1.8	0.0	chr1	155208685	155208740	(93747682)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	227541
216	21.0	22.1	0.0	chr1	155309378	155309499	(93646923)	+	MIRc	SINE/MIR	43	201	(7)	227718
1825	11.7	0.4	0.0	chr1	155311729	155311975	(93644447)	+	AluSx1	SINE/Alu	39	286	(26)	227721
223	29.6	18.4	3.3	chr1	155440623	155440898	(93515524)	+	L2b	LINE/L2	2197	2523	(896)	228024
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
401	28.1	11.7	2.9	chr1	155941017	155941230	(93015192)	C	MIRc	SINE/MIR	(41)	227	3	229152
13	17.9	4.2	4.0	chr1	155975454	155975501	(92980921)	+	(CTCCCTT)n	Simple_repeat	1	50	(0)	229214
14	4.5	4.3	0.0	chr1	155977839	155977861	(92978561)	+	(TGG)n	Simple_repeat	1	24	(0)	229215
363	26.6	10.3	0.0	chr1	156003909	156004021	(92952401)	+	MIR3	SINE/MIR	68	193	(15)	229264
40	4.5	0.0	0.0	chr1	156053813	156053858	(92902564)	+	(CTCCC)n	Simple_repeat	1	46	(0)	229383
11	13.2	5.7	2.7	chr1	156054978	156055012	(92901410)	+	(CGAGCGG)n	Simple_repeat	1	37	(0)	229385
584	26.5	4.6	1.8	chr1	156063770	156063938	(92892484)	+	MIRb	SINE/MIR	84	257	(11)	229407
206	23.1	14.5	0.0	chr1	156063946	156064010	(92892412)	C	MIR	SINE/MIR	(106)	156	81	229408
29	10.3	0.0	0.0	chr1	156064120	156064162	(92892260)	+	(AC)n	Simple_repeat	1	43	(0)	229409
13	11.9	5.0	4.8	chr1	156070721	156070760	(92885662)	+	G-rich	Low_complexity	1	42	(0)	229422
13	16.1	0.0	0.0	chr1	156080500	156080527	(92875895)	+	(CCCCA)n	Simple_repeat	1	28	(0)	229433
30	21.8	5.7	0.0	chr1	156082018	156082115	(92874307)	+	GA-rich	Low_complexity	1	103	(0)	229434
19	9.2	2.9	0.0	chr1	156082822	156082856	(92873566)	+	(GGGGGCC)n	Simple_repeat	1	36	(0)	229435
20	19.1	1.7	3.4	chr1	156082887	156082944	(92873478)	+	(CGCTCCC)n	Simple_repeat	1	59	(0)	229436
2295	5.4	0.0	5.4	chr1	156105837	156106149	(92850273)	+	AluY	SINE/Alu	1	296	(15)	229495
311	21.9	0.0	13.7	chr1	156106150	156106208	(92850214)	+	MER81	DNA/hAT-Blackjack	62	114	(0)	229494
212	32.6	1.1	0.0	chr1	156146491	156146579	(92809843)	C	L2b	LINE/L2	(508)	2911	2822	229582
342	26.1	15.3	1.8	chr1	156200582	156200694	(92755728)	C	L2c	LINE/L2	(2)	3385	3255	229684
2306	9.6	0.0	0.0	chr1	156200832	156201123	(92755299)	C	AluSx4	SINE/Alu	(8)	302	11	229685
233	32.5	0.0	1.2	chr1	156446091	156446174	(92510248)	+	Tigger19b	DNA/TcMar-Tigger	376	458	(92)	230148
239	22.4	2.0	0.0	chr1	156464017	156464065	(92492357)	C	LTR81A	LTR/Gypsy	(83)	1267	1218	230194
13	15.7	2.7	2.7	chr1	156500883	156500931	(92455491)	+	G-rich	Low_complexity	1	49	(0)	230238
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
18	20.8	2.2	0.0	chr1	156638812	156638857	(92317565)	+	(CTCT)n	Simple_repeat	1	47	(0)	230506
444	29.6	1.5	0.0	chr1	156638872	156639006	(92317416)	+	MIRc	SINE/MIR	9	145	(123)	230507
31	23.7	0.0	0.0	chr1	156660382	156660448	(92295974)	+	(GT)n	Simple_repeat	1	67	(0)	230532
248	33.7	1.0	0.0	chr1	156678277	156678371	(92278051)	C	MIR	SINE/MIR	(5)	257	162	230552
14	4.5	4.3	0.0	chr1	156693381	156693403	(92263019)	+	(TCC)n	Simple_repeat	1	24	(0)	230586
13	21.5	1.9	5.5	chr1	156693438	156693491	(92262931)	+	(TCCCC)n	Simple_repeat	1	55	(0)	230587
1447	13.4	15.0	2.3	chr1	156726422	156726682	(92229740)	C	AluJo	SINE/Alu	(11)	301	2	230641
27	16.6	0.0	0.0	chr1	156747228	156747274	(92209148)	+	(C)n	Simple_repeat	1	47	(0)	230672
22	26.1	3.1	3.0	chr1	156751706	156751805	(92204617)	+	(CCTCCC)n	Simple_repeat	1	100	(0)	230674
1329	9.3	0.0	0.6	chr1	156758624	156758795	(92197627)	+	AluSx1	SINE/Alu	129	299	(13)	230697
17	17.2	0.0	2.4	chr1	156804639	156804679	(92151743)	+	(CCTC)n	Simple_repeat	1	41	(0)	230798
13	14.1	3.0	2.9	chr1	156866416	156866448	(92089974)	+	GA-rich	Low_complexity	1	34	(0)	230894
323	33.2	5.7	3.9	chr1	156892180	156892325	(92064097)	+	MIRb	SINE/MIR	77	225	(43)	230940
2074	13.9	0.3	1.9	chr1	156892574	156892753	(92063669)	C	AluJb	SINE/Alu	(0)	312	138	230942
16	18.2	0.0	2.6	chr1	157127123	157127163	(91829259)	+	(AACA)n	Simple_repeat	1	39	(0)	231305
491	28.8	1.9	1.3	chr1	157377188	157377342	(91579080)	C	MIRc	SINE/MIR	(111)	157	2	231632
336	15.7	6.7	0.0	chr1	157377550	157377619	(91578803)	C	MIRb	SINE/MIR	(69)	199	125	231633
29	5.6	0.0	0.0	chr1	157993304	157993340	(90963082)	+	(GGAGGCAG)n	Simple_repeat	1	37	(0)	232475
19	23.3	4.6	0.0	chr1	157993504	157993577	(90962845)	+	(GCGCGG)n	Simple_repeat	1	77	(0)	232476
2320	11.9	0.0	0.6	chr1	158053931	158054242	(90902180)	+	AluSg	SINE/Alu	1	310	(0)	232598
248	33.3	3.9	0.0	chr1	158124990	158125088	(90831334)	+	Plat_L3	LINE/CR1	3434	3536	(50)	232712
37	21.5	4.5	0.9	chr1	159188235	159188344	(89768078)	+	(CTCCCCT)n	Simple_repeat	1	115	(0)	234014
13	8.1	3.6	3.5	chr1	159914145	159914172	(89042250)	+	(CTC)n	Simple_repeat	1	29	(0)	234946
276	32.9	1.1	1.7	chr1	160032504	160032639	(88923783)	+	L2c	LINE/L2	3001	3140	(247)	235134
249	33.6	6.3	6.7	chr1	160032763	160032985	(88923437)	+	L2c	LINE/L2	3158	3379	(8)	235134
359	25.0	15.2	0.0	chr1	160097056	160097167	(88859255)	+	MIRb	SINE/MIR	25	156	(112)	235222
39	21.7	0.0	7.8	chr1	160098681	160098822	(88857600)	+	(CGCCC)n	Simple_repeat	1	142	(0)	235224
200	23.9	14.5	0.0	chr1	160169937	160170007	(88786415)	C	MIRc	SINE/MIR	(14)	254	172	235352
14	12.4	2.4	7.1	chr1	160205260	160205300	(88751122)	+	(TCC)n	Simple_repeat	1	42	(0)	235408
27	14.0	0.0	0.0	chr1	160205393	160205439	(88750983)	+	(GGC)n	Simple_repeat	1	47	(0)	235409
414	30.5	10.4	1.3	chr1	160342062	160342297	(88614125)	C	MIR	SINE/MIR	(1)	261	2	235604
672	16.4	24.4	0.0	chr1	160342439	160342584	(88613838)	+	MER53	DNA/hAT	1	193	(0)	235605
338	17.3	6.2	3.9	chr1	160363476	160363553	(88592869)	+	LTR54	LTR/ERV1	402	481	(29)	235633
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
1579	14.5	2.8	2.1	chr1	160978553	160978597	(87977825)	+	MER34C2	LTR/ERV1	417	459	(96)	236607
1764	17.1	0.7	1.0	chr1	160978655	160978952	(87977470)	+	AluJb	SINE/Alu	4	300	(12)	236609
567	26.7	3.7	5.3	chr1	161001794	161001983	(87954439)	C	MIRc	SINE/MIR	(1)	267	81	236661
24	12.7	4.5	4.3	chr1	161197366	161197431	(87758991)	+	G-rich	Low_complexity	1	69	(0)	237060
13	20.4	2.4	2.4	chr1	161198502	161198542	(87757880)	+	(CAG)n	Simple_repeat	1	42	(0)	237061
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
20	13.9	7.0	1.6	chr1	164559013	164559069	(84397353)	+	(CCCTCCT)n	Simple_repeat	1	61	(0)	242315
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
12	17.4	2.9	2.8	chr1	164589141	164589175	(84367247)	+	GA-rich	Low_complexity	1	36	(0)	242358
32	0.0	0.0	0.0	chr1	165393196	165393225	(83563197)	+	(TCTGTGG)n	Simple_repeat	1	30	(0)	243552
593	7.2	0.0	0.0	chr1	165473321	165473389	(83483033)	+	AluYb8	SINE/Alu	1	69	(249)	243692
135	26.4	0.7	3.2	chr1	165481683	165482070	(83474352)	+	GA-rich	Low_complexity	14	392	(0)	243711
775	18.8	4.2	16.2	chr1	165509929	165510061	(83446361)	C	MER5A	DNA/hAT-Charlie	(0)	189	82	243765
1441	8.4	1.6	0.0	chr1	165510062	165510251	(83446171)	C	L1PB2	LINE/L1	(3)	6148	5956	243766
775	18.8	4.2	16.2	chr1	165510252	165510333	(83446089)	C	MER5A	DNA/hAT-Charlie	(108)	81	1	243765
24	20.0	4.2	1.4	chr1	165598850	165598920	(83357502)	+	GA-rich	Low_complexity	1	74	(0)	243922
281	32.2	8.8	3.3	chr1	165634480	165634662	(83321760)	+	L2a	LINE/L2	2947	3140	(286)	243997
15	18.5	0.0	7.8	chr1	165634713	165634752	(83321670)	+	(CT)n	Simple_repeat	1	36	(0)	243998
31	0.0	4.4	4.3	chr1	165634753	165634797	(83321625)	+	(CTCC)n	Simple_repeat	1	47	(0)	243999
15	18.5	0.0	7.8	chr1	165634798	165634807	(83321615)	+	(CT)n	Simple_repeat	1	10	(0)	244000
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
880	20.9	5.1	5.9	chr1	167163050	167163152	(81793270)	+	Charlie10b	DNA/hAT-Charlie	1	101	(141)	246248
50	0.0	0.0	0.0	chr1	167163153	167163195	(81793227)	+	(AC)n	Simple_repeat	1	43	(0)	246249
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
563	37.2	2.8	5.9	chr1	167648880	167649253	(81307169)	C	L2c	LINE/L2	(0)	3387	3026	247068
943	29.2	9.0	6.6	chr1	167658731	167659280	(81297142)	C	L1ME3G	LINE/L1	(345)	579	15	247083
405	23.7	12.0	6.6	chr1	167803571	167803751	(81152671)	C	MIR3	SINE/MIR	(8)	200	9	247340
44	20.1	6.8	0.7	chr1	167803797	167803929	(81152493)	+	(TCCTC)n	Simple_repeat	1	142	(0)	247341
565	29.1	14.1	0.8	chr1	168565887	168566149	(80390273)	C	L2a	LINE/L2	(0)	3426	3123	248585
181	27.9	6.2	6.2	chr1	168566108	168566172	(80390250)	C	OldhAT1	DNA/hAT-Ac	(1182)	1666	1602	248586
382	24.2	7.7	0.0	chr1	168614328	168614459	(80341963)	C	MER5A1	DNA/hAT-Charlie	(23)	143	1	248642
223	22.0	12.5	4.2	chr1	169086939	169087033	(79869389)	+	MIR1_Amn	SINE/MIR	72	175	(55)	249416
42	22.7	4.8	0.8	chr1	169087035	169087159	(79869263)	+	(CTCT)n	Simple_repeat	1	131	(0)	249417
253	23.2	5.5	0.0	chr1	169087181	169087249	(79869173)	+	AmnSINE1	SINE/5S-Deu-L2	503	575	(0)	249418
13	17.7	5.3	0.0	chr1	169105812	169105849	(79850573)	+	(GCAGGA)n	Simple_repeat	1	40	(0)	249447
43	17.8	2.1	1.1	chr1	170663003	170663057	(78293365)	+	(CT)n	Simple_repeat	1	56	(0)	251604
32	5.4	0.0	0.0	chr1	170663058	170663096	(78293326)	+	(CTCC)n	Simple_repeat	1	39	(0)	251605
43	17.8	2.1	1.1	chr1	170663097	170663133	(78293289)	+	(CT)n	Simple_repeat	1	37	(0)	251606
24	29.0	2.5	1.2	chr1	170664065	170664144	(78292278)	+	(CT)n	Simple_repeat	1	82	(0)	251608
26	19.9	3.1	5.9	chr1	170664145	170664157	(78292265)	+	(CCCT)n	Simple_repeat	6	101	(0)	251609
262	30.9	8.4	1.3	chr1	171742512	171742665	(77213757)	C	MIR3	SINE/MIR	(11)	197	32	253261
232	26.1	12.6	11.9	chr1	173210443	173210686	(75745736)	C	L2b	LINE/L2	(386)	3033	2788	255269
7275	15.3	10.4	1.9	chr1	173569814	173571140	(75385282)	C	L1MA2	LINE/L1	(6095)	1470	17	255771
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
17	17.4	0.0	4.7	chr1	174023680	174023722	(74932700)	+	(CTC)n	Simple_repeat	1	43	(0)	256540
236	31.6	10.1	8.0	chr1	174114765	174114977	(74841445)	+	MLT1N2	LTR/ERVL-MaLR	3	220	(342)	256737
15	26.5	2.4	0.0	chr1	174114989	174115030	(74841392)	+	(CT)n	Simple_repeat	1	43	(0)	256738
19640	11.8	4.9	5.2	chr1	174215470	174216445	(74739977)	+	L1MA3	LINE/L1	6727	7724	(0)	256909
549	24.2	0.0	0.0	chr1	174216632	174216763	(74739659)	C	L1MCa	LINE/L1	(4721)	1787	1656	256907
31	3.1	0.0	0.0	chr1	174799759	174799791	(74156631)	+	(GCA)n	Simple_repeat	1	33	(0)	257708
424	33.2	8.2	2.0	chr1	175125515	175125766	(73830656)	C	L1MC4	LINE/L1	(4984)	1231	963	258253
14	26.3	1.9	1.9	chr1	175193088	175193140	(73763282)	+	(CGCCCCC)n	Simple_repeat	1	54	(0)	258356
300	29.9	1.1	0.0	chr1	175781879	175781965	(73174457)	+	L2a	LINE/L2	3338	3425	(1)	259208
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
28	18.7	1.2	4.9	chr1	177164718	177164797	(71791625)	+	G-rich	Low_complexity	1	81	(0)	261281
20	7.2	0.0	0.0	chr1	177171456	177171485	(71784937)	+	(GGC)n	Simple_repeat	1	30	(0)	261289
20	16.9	5.7	0.0	chr1	177182107	177182159	(71774263)	+	(CCCTC)n	Simple_repeat	1	56	(0)	261308
27	21.4	2.3	3.4	chr1	177182160	177182188	(71774234)	+	(CCCT)n	Simple_repeat	5	88	(0)	261309
218	35.8	2.6	3.8	chr1	177209345	177209501	(71746921)	C	AmnSINE1	SINE/5S-Deu-L2	(367)	208	54	261357
41	14.1	0.0	1.4	chr1	178093761	178093834	(70862588)	+	(GCCGCC)n	Simple_repeat	1	74	(0)	262569
293	27.9	5.4	3.2	chr1	178131881	178132006	(70824416)	C	Tigger15a	DNA/TcMar-Tigger	(258)	457	329	262631
23	11.7	9.4	4.3	chr1	178132008	178132087	(70824335)	+	(TCTTC)n	Simple_repeat	1	84	(0)	262632
1469	15.6	8.7	6.0	chr1	178132088	178132356	(70824066)	C	AluJo	SINE/Alu	(35)	277	1	262633
27	21.1	3.6	2.3	chr1	179342223	179342305	(69614117)	+	(CCTCC)n	Simple_repeat	1	86	(0)	264670
28	26.2	3.3	1.1	chr1	179342267	179342273	(69614149)	+	(CTTT)n	Simple_repeat	1	28	(64)	264671
30	27.5	0.0	0.0	chr1	179342274	179342344	(69614078)	+	(TC)n	Simple_repeat	1	71	(0)	264672
28	26.2	3.3	1.1	chr1	179342345	179342356	(69614066)	+	(CTTT)n	Simple_repeat	29	92	(0)	264671
14	9.6	0.0	0.0	chr1	179882205	179882227	(69074195)	+	(TCC)n	Simple_repeat	1	23	(0)	265466
55	12.3	1.6	5.6	chr1	180543075	180543197	(68413225)	+	GA-rich	Low_complexity	1	125	(0)	266541
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
73	14.6	2.4	4.1	chr1	181124450	181124616	(67831806)	+	(CTC)n	Simple_repeat	1	171	(0)	267510
18	0.0	0.0	0.0	chr1	181124740	181124759	(67831663)	+	(T)n	Simple_repeat	1	20	(0)	267511
310	32.3	19.1	5.2	chr1	182028926	182029560	(66926862)	+	L2b	LINE/L2	2539	3298	(77)	268744
1872	14.2	3.0	3.0	chr1	182068634	182068935	(66887487)	+	AluJo	SINE/Alu	1	302	(10)	268793
25	16.8	3.1	3.0	chr1	182068954	182069018	(66887404)	+	GA-rich	Low_complexity	1	67	(0)	268794
64	24.1	0.9	4.8	chr1	182299813	182299996	(66656426)	+	GA-rich	Low_complexity	1	176	(0)	269195
407	27.7	4.7	4.2	chr1	182614697	182614772	(66341650)	+	MIRc	SINE/MIR	191	268	(0)	269750
16	23.0	0.0	0.0	chr1	182614833	182614873	(66341549)	+	G-rich	Low_complexity	1	41	(0)	269752
383	30.7	9.7	5.8	chr1	182616033	182616340	(66340082)	C	MLT1N2	LTR/ERVL-MaLR	(31)	531	211	269756
230	32.7	11.0	5.8	chr1	182617930	182618101	(66338321)	C	MamRTE1	LINE/RTE-BovB	(3551)	261	80	269759
3535	16.9	5.3	3.7	chr1	183081607	183082383	(65874039)	C	L1MC1	LINE/L1	(20)	6313	5524	270549
693	21.8	14.9	1.6	chr1	183091253	183091443	(65864979)	C	MER58A	DNA/hAT-Charlie	(3)	221	1	270560
17	20.8	0.0	4.1	chr1	183091473	183091481	(65864941)	+	(CCTC)n	Simple_repeat	1	48	(0)	270561
15	15.2	2.6	2.5	chr1	183091482	183091520	(65864902)	+	(CTCCCT)n	Simple_repeat	1	40	(0)	270562
13	16.2	7.0	2.2	chr1	183212432	183212483	(65743939)	+	(TCC)n	Simple_repeat	1	54	(0)	270736
218	32.1	10.4	5.3	chr1	183212561	183212997	(65743425)	+	L2	LINE/L2	2240	2701	(718)	270737
533	23.9	14.2	0.0	chr1	183219408	183219583	(65736839)	C	L1ME3B	LINE/L1	(98)	6144	5940	270749
381	32.3	8.4	8.2	chr1	183303036	183303099	(65653323)	C	L2c	LINE/L2	(306)	3081	3021	270884
634	30.2	0.8	6.8	chr1	183303320	183303571	(65652851)	C	MIRb	SINE/MIR	(12)	256	20	270886
13	15.1	5.1	2.4	chr1	183471444	183471500	(65484922)	+	(CGCC)n	Simple_repeat	1	58	(0)	271187
15	12.5	0.0	3.6	chr1	183473416	183473443	(65482979)	+	(GT)n	Simple_repeat	1	28	(0)	271191
14	17.9	0.0	0.0	chr1	183635028	183635059	(65321363)	+	A-rich	Low_complexity	1	32	(0)	271448
17	9.7	2.9	2.8	chr1	183805083	183805117	(65151305)	+	(GCTC)n	Simple_repeat	1	36	(0)	271671
13	8.5	4.0	0.0	chr1	183805140	183805164	(65151258)	+	(CGG)n	Simple_repeat	1	26	(0)	271672
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
18	9.3	0.0	7.3	chr1	185317384	185317424	(63638998)	+	(GCCCC)n	Simple_repeat	1	41	(0)	274053
564	24.7	6.8	0.7	chr1	185732799	185732949	(63223473)	C	MIR	SINE/MIR	(94)	168	8	274706
885	25.8	16.8	4.9	chr1	186082218	186082650	(62873772)	C	MLT1H	LTR/ERVL-MaLR	(13)	476	1	275140
13	12.2	3.7	0.0	chr1	192808661	192808687	(56147735)	+	(CGC)n	Simple_repeat	1	28	(0)	283883
527	25.5	3.7	3.7	chr1	193104812	193105002	(55851420)	+	MER53	DNA/hAT	1	191	(2)	284361
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
19	0.0	7.7	4.8	chr1	197197309	197197347	(51759075)	+	(GATATA)n	Simple_repeat	1	42	(0)	289608
34	17.5	5.6	1.1	chr1	197197525	197197613	(51758809)	+	GA-rich	Low_complexity	1	94	(0)	289609
235	29.9	4.4	2.2	chr1	197201970	197202058	(51754364)	C	MER5A1	DNA/hAT-Charlie	(75)	91	1	289612
237	32.2	0.9	10.2	chr1	197202228	197202355	(51754067)	+	L1ME1	LINE/L1	404	519	(6584)	289613
296	26.2	1.2	4.5	chr1	197521494	197521581	(51434841)	C	MIR	SINE/MIR	(98)	164	80	290026
22	12.2	0.0	0.0	chr1	197915288	197915324	(51041098)	+	(CTC)n	Simple_repeat	1	37	(0)	290526
20	11.2	5.0	0.0	chr1	197921802	197921841	(51034581)	+	G-rich	Low_complexity	1	42	(0)	290529
30	22.1	6.7	0.0	chr1	200039128	200039217	(48917205)	+	GA-rich	Low_complexity	1	96	(0)	293530
2808	13.3	3.1	2.5	chr1	200280149	200280634	(48675788)	C	L1MB5	LINE/L1	(7)	6167	5679	293922
13	16.7	4.8	2.3	chr1	200483909	200483950	(48472472)	+	(TCTTGC)n	Simple_repeat	1	44	(0)	294341
479	26.7	17.6	2.0	chr1	200488361	200488743	(48467679)	C	L2a	LINE/L2	(210)	3216	2767	294352
421	26.6	1.8	3.5	chr1	200738476	200738588	(48217834)	+	MIRb	SINE/MIR	155	265	(3)	294912
27	20.2	5.2	3.0	chr1	200738767	200738862	(48217560)	+	G-rich	Low_complexity	1	101	(0)	294913
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
28	5.4	2.6	0.0	chr1	200898481	200898519	(48057903)	+	(CCCTGGT)n	Simple_repeat	1	40	(0)	295177
17	25.3	8.4	0.0	chr1	200899100	200899182	(48057240)	+	GA-rich	Low_complexity	1	90	(0)	295179
17	12.9	7.0	0.0	chr1	200899350	200899357	(48057065)	+	(GCATGT)n	Simple_repeat	1	43	(0)	295180
20	14.4	0.0	0.0	chr1	200899358	200899389	(48057033)	+	(TG)n	Simple_repeat	1	32	(0)	295181
736	13.8	13.7	13.7	chr1	201104161	201104379	(47852043)	C	MER20	DNA/hAT-Charlie	(0)	219	1	295506
1308	22.7	8.7	2.8	chr1	201104380	201104698	(47851724)	+	LTR37B	LTR/ERV1	120	468	(0)	295505
68	12.6	0.8	1.7	chr1	201111901	201112019	(47844403)	+	(TCC)n	Simple_repeat	1	120	(0)	295518
482	32.0	7.3	3.0	chr1	201470039	201470273	(47486149)	+	MIR	SINE/MIR	7	252	(10)	296074
252	25.4	0.0	0.0	chr1	201480400	201480458	(47475964)	+	CR1-3_Croc	LINE/CR1	2747	2805	(800)	296096
12	13.7	5.3	8.3	chr1	201512172	201512228	(47444194)	+	G-rich	Low_complexity	1	60	(0)	296159
14	18.0	0.0	2.9	chr1	201538383	201538416	(47418006)	+	(TCC)n	Simple_repeat	1	34	(0)	296220
12	22.6	2.3	2.3	chr1	201538417	201538425	(47417997)	+	(TCCTCCC)n	Simple_repeat	1	44	(0)	296221
199	15.4	2.5	0.0	chr1	201538479	201538517	(47417905)	C	L2b	LINE/L2	(20)	3355	3316	296222
257	32.2	4.2	0.9	chr1	201599854	201599969	(47356453)	C	MER126	DNA	(23)	426	307	296335
340	29.7	1.1	1.1	chr1	201628404	201628495	(47327927)	C	MIR3	SINE/MIR	(75)	133	42	296394
20	15.7	0.0	7.0	chr1	201648566	201648622	(47307800)	+	(CCCCCG)n	Simple_repeat	1	57	(0)	296421
918	24.6	1.4	0.9	chr1	201702745	201702967	(47253455)	+	MIR	SINE/MIR	17	229	(33)	296506
191	25.8	0.0	5.7	chr1	201703210	201703279	(47253143)	+	L3	LINE/CR1	799	864	(3235)	296507
46	21.2	3.1	4.8	chr1	201955119	201955207	(47001215)	+	A-rich	Low_complexity	71	157	(0)	296924
291	26.4	1.9	10.2	chr1	202106180	202106297	(46850125)	+	MIR3	SINE/MIR	73	180	(28)	297299
214	31.2	4.9	2.5	chr1	202119197	202119275	(46837147)	C	L2b	LINE/L2	(1)	3374	3294	297331
16	24.1	0.0	2.2	chr1	202144755	202144800	(46811622)	+	(CCG)n	Simple_repeat	1	46	(0)	297386
498	28.6	4.7	3.9	chr1	202237345	202237577	(46718845)	+	MamTip1	DNA/hAT-Tip100	21	255	(12)	297541
1586	10.8	4.9	0.8	chr1	202871135	202871387	(46085035)	C	MER41D	LTR/ERV1	(292)	265	2	298660
250	29.0	7.4	4.0	chr1	203040515	203040652	(45915770)	C	L2c	LINE/L2	(34)	3353	3180	298958
285	29.2	2.1	1.4	chr1	203118081	203118190	(45838232)	+	MIR	SINE/MIR	108	215	(53)	299080
18	17.2	0.0	2.4	chr1	203127628	203127668	(45828754)	+	GA-rich	Low_complexity	1	41	(0)	299095
12	13.9	0.0	0.0	chr1	203127680	203127703	(45828719)	+	(GCC)n	Simple_repeat	1	24	(0)	299096
604	23.7	3.9	3.4	chr1	203267878	203268056	(45688366)	+	LTR41B	LTR/ERVL	471	650	(108)	299315
46	12.3	0.0	0.0	chr1	203306796	203306875	(45649547)	+	(AC)n	Simple_repeat	1	80	(0)	299386
546	30.5	7.5	2.3	chr1	203316981	203317195	(45639227)	C	MER102a	DNA/hAT-Charlie	(27)	303	77	299401
56	18.7	5.0	0.7	chr1	203321716	203321856	(45634566)	+	(TCCTC)n	Simple_repeat	1	148	(0)	299412
1848	16.3	0.7	0.0	chr1	203321857	203322150	(45634272)	C	AluJb	SINE/Alu	(16)	296	1	299413
21	22.3	3.8	0.0	chr1	203514255	203514307	(45442115)	+	(CT)n	Simple_repeat	1	55	(0)	299740
15	24.6	6.7	0.0	chr1	203601099	203601213	(45355209)	+	(CCTCT)n	Simple_repeat	1	122	(0)	299918
83	16.5	6.1	1.8	chr1	203624319	203624530	(45331892)	+	GA-rich	Low_complexity	1	225	(0)	299979
15	19.9	0.0	0.0	chr1	203627675	203627703	(45328719)	+	A-rich	Low_complexity	1	29	(0)	299985
12	17.9	5.0	2.4	chr1	204065364	204065403	(44891019)	+	(CCT)n	Simple_repeat	1	42	(0)	300912
16	23.6	1.7	3.4	chr1	204073047	204073104	(44883318)	+	(CCCT)n	Simple_repeat	1	59	(0)	300927
11	16.4	5.9	0.0	chr1	204073214	204073247	(44883175)	+	(GAGCTCA)n	Simple_repeat	1	36	(0)	300928
447	28.2	13.0	4.2	chr1	204102738	204102926	(44853496)	C	MIRb	SINE/MIR	(58)	210	3	300989
238	30.9	16.1	0.0	chr1	204103085	204103220	(44853202)	C	MIRb	SINE/MIR	(21)	247	86	300990
39	14.6	4.3	2.0	chr1	204129248	204129341	(44827081)	+	(CCTCCGC)n	Simple_repeat	1	98	(0)	301045
13	33.3	4.1	0.0	chr1	204358874	204358946	(44597476)	+	(CCTCC)n	Simple_repeat	1	76	(0)	301417
29	3.2	0.0	0.0	chr1	204412048	204412079	(44544343)	+	(G)n	Simple_repeat	1	32	(0)	301493
1094	16.0	1.6	0.6	chr1	204412256	204412437	(44543985)	C	MER2	DNA/TcMar-Tigger	(22)	323	140	301494
147	20.1	4.2	4.2	chr1	204416648	204417105	(44539317)	+	GA-rich	Low_complexity	1	477	(0)	301507
16	19.6	3.6	3.5	chr1	204467135	204467190	(44489232)	+	G-rich	Low_complexity	1	58	(0)	301577
23	16.8	0.0	8.3	chr1	204494845	204494916	(44461506)	+	(CCTCC)n	Simple_repeat	1	72	(0)	301631
380	27.2	6.5	11.4	chr1	204515966	204516016	(44440406)	C	L3	LINE/CR1	(391)	3708	3665	301689
15	35.4	0.0	0.0	chr1	204652223	204652284	(44304138)	+	(CCC)n	Simple_repeat	1	62	(0)	301989
15	24.6	5.6	2.7	chr1	204652285	204652292	(44304130)	+	(TCC)n	Simple_repeat	2	75	(0)	301990
19	21.8	7.1	2.2	chr1	204652293	204652301	(44304121)	+	(CCCTTCC)n	Simple_repeat	5	90	(0)	301991
18	24.0	1.6	3.2	chr1	204828678	204828739	(44127683)	+	(GCG)n	Simple_repeat	1	63	(0)	302355
227	34.4	9.5	6.7	chr1	204879258	204879450	(44076972)	C	MIRb	SINE/MIR	(0)	268	70	302447
16	12.3	10.9	1.6	chr1	205301735	205301758	(43654664)	+	(AGCAGG)n	Simple_repeat	1	74	(0)	303177
13	23.2	0.0	4.5	chr1	205301759	205301802	(43654620)	+	GA-rich	Low_complexity	1	44	(0)	303178
240	23.6	3.3	9.2	chr1	205335929	205336026	(43620396)	+	L2c	LINE/L2	3101	3192	(195)	303244
12	13.1	0.0	9.8	chr1	205344084	205344124	(43612298)	+	(CCCCCG)n	Simple_repeat	1	41	(0)	303253
197	29.2	15.9	0.9	chr1	205348845	205348951	(43607471)	C	L3b	LINE/CR1	(197)	5035	4910	303264
823	29.1	7.1	8.6	chr1	205425186	205425512	(43530910)	C	Tigger19a	DNA/TcMar-Tigger	(1)	322	1	303421
31	0.0	0.0	3.0	chr1	205504601	205504633	(43451789)	+	(TCC)n	Simple_repeat	1	33	(0)	303573
287	29.9	4.5	3.9	chr1	205519462	205519614	(43436808)	C	L3b	LINE/CR1	(154)	5078	4925	303596
241	23.8	7.3	6.0	chr1	205548938	205549071	(43407351)	C	L1ME4a	LINE/L1	(0)	6124	5989	303654
18	14.9	0.0	2.6	chr1	205569472	205569510	(43386912)	+	(CTCC)n	Simple_repeat	1	39	(0)	303705
223	27.9	17.1	0.0	chr1	205580045	205580180	(43376242)	+	MIRc	SINE/MIR	74	237	(31)	303723
13	12.5	0.0	0.0	chr1	205671099	205671124	(43285298)	+	(CTCCC)n	Simple_repeat	1	26	(0)	303879
18	10.5	0.0	0.0	chr1	205774790	205774820	(43181602)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	304076
52	7.8	6.0	1.9	chr1	205980806	205980905	(42975517)	+	(CCTTCC)n	Simple_repeat	1	106	(0)	304369
1577	15.2	4.0	3.4	chr1	205980906	205981200	(42975222)	C	AluJb	SINE/Alu	(15)	297	1	304370
15	13.4	5.9	0.0	chr1	206447174	206447207	(42509215)	+	(CCT)n	Simple_repeat	1	36	(0)	305121
18	23.3	5.4	4.1	chr1	206501248	206501340	(42455082)	+	(GAGAGAT)n	Simple_repeat	1	98	(0)	305196
11	28.7	4.6	1.5	chr1	206674694	206674758	(42281664)	+	(TGTTCCT)n	Simple_repeat	1	68	(0)	305499
187	20.3	10.4	5.5	chr1	206910226	206910298	(42046124)	+	OldhAT1	DNA/hAT-Ac	292	368	(2480)	305900
691	28.8	4.8	0.0	chr1	206910496	206910672	(42045750)	+	MIRb	SINE/MIR	37	222	(46)	305901
38	14.7	2.2	3.3	chr1	207807752	207807847	(41148575)	+	G-rich	Low_complexity	1	94	(0)	307155
244	23.8	0.0	3.1	chr1	208045229	208045293	(40911129)	+	Mam_R4	LINE/Dong-R4	1174	1236	(2573)	307521
222	25.2	6.7	3.4	chr1	208054792	208054877	(40901545)	+	L2b	LINE/L2	3298	3421	(5)	307536
513	31.1	3.2	3.2	chr1	208132384	208132573	(40823849)	+	MIRb	SINE/MIR	16	210	(58)	307649
244	28.7	0.0	0.0	chr1	208134537	208134623	(40821799)	+	MER127	DNA/TcMar-Tigger	1	87	(277)	307654
22	9.4	0.0	0.0	chr1	208248502	208248536	(40707886)	+	(CCCTC)n	Simple_repeat	1	35	(0)	307831
17	20.3	2.4	0.0	chr1	209675275	209675315	(39281107)	+	(TCC)n	Simple_repeat	1	42	(0)	310028
1309	25.6	14.8	1.3	chr1	209900043	209900645	(39055777)	+	LTR50	LTR/ERVL	9	706	(89)	310358
1709	16.4	2.5	1.4	chr1	210207358	210207632	(38748790)	+	AluJb	SINE/Alu	1	278	(34)	310777
953	23.9	8.2	3.4	chr1	210207633	210207691	(38748731)	+	L1ME1	LINE/L1	5951	6019	(325)	310776
51	27.0	1.8	3.0	chr1	210207692	210207857	(38748565)	+	GA-rich	Low_complexity	1	169	(0)	310778
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
15	18.4	2.1	4.2	chr1	211259610	211259656	(37696766)	+	(CGGCAG)n	Simple_repeat	1	48	(0)	312390
14	4.8	0.0	4.2	chr1	211259634	211259657	(37696765)	+	(CGG)n	Simple_repeat	1	24	(0)	312391
14	16.2	0.0	5.3	chr1	211330480	211330517	(37625905)	+	(TCCC)n	Simple_repeat	1	38	(0)	312513
12	23.9	1.3	9.1	chr1	211517173	211517248	(37439174)	+	GA-rich	Low_complexity	1	77	(0)	312847
308	29.5	12.9	2.6	chr1	211633455	211633607	(37322815)	+	MIRb	SINE/MIR	66	236	(32)	313092
28	22.9	2.0	4.8	chr1	211895371	211895478	(37060944)	+	(TCTTCC)n	Simple_repeat	1	104	(0)	313568
1582	19.9	19.7	5.4	chr1	212434270	212434747	(36521675)	+	MER68B	LTR/ERVL	2	564	(0)	314493
13	7.6	3.1	6.1	chr1	212529442	212529473	(36426949)	+	(CTCC)n	Simple_repeat	1	33	(0)	314693
16	17.1	4.9	2.3	chr1	212558963	212559003	(36397419)	+	(CG)n	Simple_repeat	1	43	(0)	314754
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
14	12.2	0.0	0.0	chr1	212665650	212665676	(36290746)	+	(CTCCC)n	Simple_repeat	1	27	(0)	314924
17	27.7	1.6	1.6	chr1	212709231	212709291	(36247131)	+	(TCTC)n	Simple_repeat	1	62	(0)	315008
188	34.3	9.9	0.0	chr1	212709296	212709432	(36246990)	+	L2c	LINE/L2	2363	2514	(905)	315009
509	28.2	5.0	1.2	chr1	213374262	213374433	(35581989)	C	MER103C	DNA/hAT-Charlie	(114)	183	5	316136
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
61	25.9	3.3	2.3	chr1	213988205	213988272	(34968150)	+	(CTCTT)n	Simple_repeat	34	219	(0)	317039
12	17.6	3.1	0.0	chr1	213989528	213989559	(34966863)	+	GA-rich	Low_complexity	1	33	(0)	317042
622	35.1	1.3	2.4	chr1	214439734	214440110	(34516312)	C	CR1_Mam	LINE/CR1	(612)	1592	1220	317695
434	27.9	0.0	7.3	chr1	214440150	214440300	(34516122)	+	MIR3	SINE/MIR	62	201	(7)	317696
33	18.4	0.0	3.7	chr1	214539652	214539732	(34416690)	+	G-rich	Low_complexity	1	81	(0)	317862
16	18.7	7.0	0.0	chr1	214551802	214551844	(34404578)	+	(GC)n	Simple_repeat	1	46	(0)	317877
288	27.5	4.4	1.8	chr1	214602102	214602212	(34354210)	C	L2c	LINE/L2	(33)	3354	3241	317966
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
28	25.1	0.0	1.3	chr1	218345395	218345471	(30610951)	+	GA-rich	Low_complexity	1	77	(0)	323090
251	30.7	0.0	13.6	chr1	219555313	219555444	(29400978)	+	OldhAT1	DNA/hAT-Ac	2719	2832	(16)	324773
15	23.4	2.8	5.4	chr1	220528499	220528570	(28427852)	+	(CCGCCTC)n	Simple_repeat	1	74	(0)	326372
13	18.4	0.0	0.0	chr1	220528630	220528660	(28427762)	+	(CTCCTC)n	Simple_repeat	1	31	(0)	326373
344	23.6	8.3	0.0	chr1	220760139	220760248	(28196174)	+	Charlie2b	DNA/hAT-Charlie	211	330	(2452)	326697
12	25.1	7.0	0.0	chr1	220917645	220917701	(28038721)	+	G-rich	Low_complexity	1	61	(0)	326900
188	31.8	5.2	4.3	chr1	221440765	221440879	(27515543)	+	LFSINE_Vert	SINE/tRNA	101	216	(243)	327636
32	24.4	8.0	3.0	chr1	221715903	221716089	(27240333)	+	(TCTCTC)n	Simple_repeat	1	202	(0)	328064
19	21.3	3.0	4.3	chr1	222548109	222548175	(26408247)	+	(TCC)n	Simple_repeat	1	69	(0)	329315
255	26.5	7.5	1.0	chr1	223501024	223501122	(25455300)	+	LTR79	LTR/ERVL	75	180	(347)	330791
21	28.0	7.8	2.6	chr1	223501145	223501285	(25455137)	+	(CTTCT)n	Simple_repeat	1	152	(0)	330792
341	27.4	4.0	1.0	chr1	223706619	223706714	(25249708)	+	MIRb	SINE/MIR	116	214	(54)	331073
2422	9.6	0.0	0.0	chr1	223706798	223707098	(25249324)	+	AluSx1	SINE/Alu	1	301	(11)	331074
338	16.7	3.0	17.9	chr1	223710311	223710362	(25246060)	C	LTR37A	LTR/ERV1	(346)	80	40	331082
1027	22.6	0.9	6.1	chr1	223710363	223710423	(25245999)	C	MER20	DNA/hAT-Charlie	(0)	219	161	331085
2731	15.6	6.6	9.5	chr1	223710424	223711053	(25245369)	+	MER4B	LTR/ERV1	1	610	(0)	331086
14	17.4	0.0	2.9	chr1	223759495	223759529	(25196893)	+	(TCCCT)n	Simple_repeat	1	35	(0)	331177
180	29.9	13.0	0.0	chr1	223759568	223759634	(25196788)	+	MIRb	SINE/MIR	118	194	(74)	331178
501	29.6	7.5	4.0	chr1	223817429	223817651	(25138771)	+	L1ME3G	LINE/L1	338	566	(358)	331267
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
931	27.1	5.4	4.4	chr1	224363640	224364006	(24592416)	C	HAL1	LINE/L1	(1550)	957	587	332424
744	17.2	1.6	0.0	chr1	224364108	224364229	(24592193)	+	AluJo	SINE/Alu	1	124	(188)	332429
27	20.1	0.0	0.0	chr1	224434032	224434088	(24522334)	+	(CCT)n	Simple_repeat	1	57	(0)	332548
30	6.3	3.9	1.9	chr1	224434205	224434256	(24522166)	+	(GGA)n	Simple_repeat	1	54	(0)	332549
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
345	26.5	3.9	0.0	chr1	224504028	224504125	(24452297)	+	MIRc	SINE/MIR	107	208	(60)	332679
741	27.2	10.2	6.2	chr1	224884251	224884559	(24071863)	C	LTR40A1	LTR/ERVL	(107)	477	155	333316
430	20.1	10.7	11.7	chr1	224884631	224884810	(24071612)	C	LTR40A1	LTR/ERVL	(386)	198	21	333316
320	27.6	4.1	8.4	chr1	225306500	225306677	(23649745)	C	HERVL40-int	LTR/ERVL	(881)	4649	4480	333769
2115	16.8	2.5	4.7	chr1	225405346	225405750	(23550672)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	333930
751	25.7	11.1	1.4	chr1	225423045	225423320	(23533102)	+	MER5C	DNA/hAT-Charlie	8	313	(0)	333953
3239	16.1	5.7	0.2	chr1	225462619	225463184	(23493238)	+	LTR26	LTR/ERV1	5	603	(0)	334009
12	12.6	3.7	0.0	chr1	225463501	225463527	(23492895)	+	G-rich	Low_complexity	1	28	(0)	334010
225	31.6	9.3	6.5	chr1	225463604	225463833	(23492589)	C	L2b	LINE/L2	(231)	3156	2920	334011
316	31.8	7.4	6.8	chr1	225529658	225529967	(23426455)	+	HAL1ME	LINE/L1	194	505	(1960)	334104
2992	17.9	8.9	4.8	chr1	225614359	225614834	(23341588)	C	MER21C	LTR/ERVL	(365)	573	1	334231
184	30.7	22.8	0.0	chr1	225627247	225627555	(23328867)	C	L2	LINE/L2	(963)	2456	2057	334256
17	17.2	2.0	3.9	chr1	225770879	225770928	(23185494)	+	G-rich	Low_complexity	1	51	(0)	334554
600	22.6	13.4	0.9	chr1	225840505	225840732	(23115690)	C	LTR37A	LTR/ERV1	(89)	337	77	334676
25	7.3	4.7	0.0	chr1	225889181	225889227	(23067195)	+	(GGAG)n	Simple_repeat	1	49	(0)	334744
2103	9.7	1.4	0.4	chr1	225997849	225998126	(22958296)	+	AluSq2	SINE/Alu	1	281	(32)	334982
6902	6.6	2.6	3.7	chr1	226114299	226115980	(22840442)	C	SVA_D	Retroposon/SVA	(0)	1386	13	335242
1199	22.5	6.3	6.0	chr1	226115981	226116311	(22840111)	C	L1M4a2	LINE/L1	(1812)	844	513	335238
14	9.7	8.0	5.6	chr1	226118539	226118588	(22837834)	+	GA-rich	Low_complexity	1	54	(0)	335246
2181	7.8	0.0	1.1	chr1	226123000	226123282	(22833140)	C	AluSx1	SINE/Alu	(22)	290	11	335250
462	29.3	7.6	3.1	chr1	226187088	226187249	(22769173)	C	MIRc	SINE/MIR	(11)	257	88	335386
1737	14.0	0.4	1.1	chr1	226405341	226405605	(22550817)	C	AluSz	SINE/Alu	(49)	263	1	335831
1302	23.0	6.7	4.4	chr1	226405784	226405833	(22550589)	C	Charlie4a	DNA/hAT-Charlie	(61)	447	407	335832
893	14.5	0.0	0.0	chr1	226405834	226405964	(22550458)	+	FLAM_C	SINE/Alu	1	131	(12)	335833
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
645	16.9	12.9	0.7	chr1	226428747	226428895	(22527527)	+	MER5B	DNA/hAT-Charlie	8	177	(1)	335882
377	30.5	1.4	1.4	chr1	226429027	226429169	(22527253)	C	UCON86	LINE/L2	(46)	636	494	335883
2461	23.9	4.0	0.3	chr1	226509405	226510035	(22446387)	C	L1MC5a	LINE/L1	(1449)	1328	674	336020
28	10.0	0.0	0.0	chr1	226510116	226510159	(22446263)	+	(CCCTC)n	Simple_repeat	1	44	(0)	336030
436	21.6	10.3	4.1	chr1	226510160	226510172	(22446250)	+	MLT1H	LTR/ERVL-MaLR	80	91	(458)	336031
1690	18.1	2.0	0.0	chr1	226510173	226510470	(22445952)	C	AluJr	SINE/Alu	(2)	310	7	336032
304	35.5	13.2	2.5	chr1	226551653	226551895	(22404527)	C	L2c	LINE/L2	(0)	3387	3115	336104
101	17.2	2.9	3.2	chr1	226654890	226655132	(22301290)	+	GA-rich	Low_complexity	1	250	(0)	336241
578	17.0	17.4	0.0	chr1	226655214	226655360	(22301062)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	336242
44	0.0	0.0	0.0	chr1	226711406	226711443	(22244979)	+	(AG)n	Simple_repeat	1	38	(0)	336323
26	3.0	2.9	0.0	chr1	226711444	226711477	(22244945)	+	(TG)n	Simple_repeat	1	35	(0)	336324
16	5.2	0.0	0.0	chr1	226723565	226723584	(22232838)	+	(GT)n	Simple_repeat	1	20	(0)	336343
14	7.5	3.3	3.2	chr1	226784593	226784622	(22171800)	+	(TCTCC)n	Simple_repeat	1	31	(0)	336468
13	12.0	3.7	0.0	chr1	226891816	226891842	(22064580)	+	GA-rich	Low_complexity	1	28	(0)	336645
16	21.3	0.0	2.2	chr1	227311790	227311834	(21644588)	+	(TCATTC)n	Simple_repeat	1	45	(0)	337273
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
2224	18.6	3.2	2.1	chr1	227564047	227564512	(21391910)	C	MER57E3	LTR/ERV1	(16)	471	1	337651
26	11.3	4.7	4.5	chr1	227744540	227744603	(21211819)	+	(TCC)n	Simple_repeat	1	67	(0)	337845
184	26.2	0.0	0.0	chr1	227897175	227897216	(21059206)	+	MIR3	SINE/MIR	104	145	(63)	338023
249	24.1	2.4	1.7	chr1	227909321	227909995	(21046427)	+	GA-rich	Low_complexity	1	691	(0)	338039
2200	11.6	0.0	0.3	chr1	227910077	227910370	(21046052)	+	AluSg7	SINE/Alu	1	293	(16)	338040
39	17.3	3.9	2.8	chr1	227915636	227915738	(21040684)	+	(CCT)n	Simple_repeat	1	107	(0)	338053
31	23.9	2.9	5.6	chr1	227927865	227928006	(21028416)	+	G-rich	Low_complexity	1	138	(0)	338062
39	10.9	0.0	0.0	chr1	228078012	228078072	(20878350)	+	(GAAG)n	Simple_repeat	1	61	(0)	338266
40	20.3	4.7	3.0	chr1	228363075	228363202	(20593220)	+	GA-rich	Low_complexity	1	134	(0)	338605
19	31.2	4.0	1.0	chr1	228407064	228407163	(20549259)	+	G-rich	Low_complexity	1	104	(0)	338660
216	27.4	3.1	0.0	chr1	228783388	228783449	(20172973)	+	MIR	SINE/MIR	20	83	(179)	339186
315	34.9	0.0	4.3	chr1	229115162	229115299	(19841123)	+	L2b	LINE/L2	3241	3372	(3)	339714
425	22.5	4.8	0.0	chr1	229129988	229130107	(19826315)	C	LTR67B	LTR/ERVL	(466)	154	29	339736
249	20.6	8.5	5.8	chr1	229225493	229225595	(19730827)	C	MER129	LTR?	(168)	301	196	339893
15	10.8	3.3	0.0	chr1	229271623	229271652	(19684770)	+	(TTGCTC)n	Simple_repeat	1	31	(0)	339987
407	29.7	10.8	6.8	chr1	229271914	229272090	(19684332)	+	L2c	LINE/L2	3190	3386	(1)	339988
2141	21.0	5.1	1.7	chr1	229385858	229386390	(19570032)	C	MER74A	LTR/ERVL	(0)	558	7	340170
56	16.4	4.3	6.2	chr1	229411319	229411505	(19544917)	+	(CCCTCTC)n	Simple_repeat	1	195	(0)	340223
507	25.9	16.5	1.8	chr1	229551207	229551485	(19404937)	+	L2a	LINE/L2	3098	3425	(1)	340487
274	28.4	3.1	1.0	chr1	229838571	229838666	(19117756)	C	LTR85a	LTR/Gypsy?	(244)	458	361	340994
324	26.0	1.0	4.0	chr1	229838852	229838951	(19117471)	C	LTR85a	LTR/Gypsy?	(586)	116	20	340994
1182	28.9	5.7	6.6	chr1	229843140	229843879	(19112543)	C	L1MEd	LINE/L1	(3994)	2248	1535	341001
321	29.8	13.2	4.3	chr1	229843936	229844142	(19112280)	+	MLT1J1	LTR/ERVL-MaLR	76	303	(141)	341005
2351	12.1	0.6	0.3	chr1	230029211	230029549	(18926873)	C	MER61A	LTR/ERV1	(0)	341	2	341309
486	32.9	6.9	3.1	chr1	230086833	230087055	(18869367)	+	MIRb	SINE/MIR	21	252	(16)	341392
2597	14.3	7.8	0.2	chr1	230141317	230141777	(18814645)	C	L1MB2	LINE/L1	(12)	6159	5661	341469
75	15.9	3.8	0.6	chr1	230175527	230175684	(18780738)	+	(TCC)n	Simple_repeat	1	164	(0)	341508
31	23.6	3.3	7.9	chr1	230175685	230175708	(18780714)	+	(TTCCCC)n	Simple_repeat	2	189	(0)	341509
284	29.6	13.0	1.1	chr1	230310542	230310710	(18645712)	+	L2a	LINE/L2	3195	3423	(3)	341685
16	18.6	6.1	0.0	chr1	230426471	230426519	(18529903)	+	G-rich	Low_complexity	1	52	(0)	341849
2957	17.5	3.3	4.5	chr1	230504529	230504883	(18451539)	C	LTR39	LTR/ERV1	(0)	783	421	341982
182	40.4	0.0	0.0	chr1	230878958	230879014	(18077408)	+	AmnSINE2	SINE/tRNA-Deu	252	308	(50)	342552
11	16.4	5.9	0.0	chr1	230978233	230978266	(17978156)	+	(CTGCCAC)n	Simple_repeat	1	36	(0)	342717
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
13	13.5	0.0	7.9	chr1	231162081	231162118	(17794304)	+	G-rich	Low_complexity	1	38	(0)	343022
318	27.7	4.7	1.6	chr1	231202318	231202464	(17753958)	C	L2a	LINE/L2	(310)	3116	2961	343098
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
45	21.5	6.0	4.3	chr1	232009333	232009531	(16946891)	+	(ATAT)n	Simple_repeat	1	211	(0)	344374
16	19.9	8.5	0.0	chr1	232009655	232009713	(16946709)	+	(CTTTCCT)n	Simple_repeat	1	64	(0)	344375
123	23.1	3.2	4.9	chr1	232031107	232031540	(16924882)	+	GA-rich	Low_complexity	1	448	(0)	344404
3820	15.2	3.7	1.1	chr1	232168469	232169121	(16787301)	+	LTR51	LTR/ERV1	1	671	(0)	344608
56	29.0	4.3	3.8	chr1	232334550	232334851	(16621571)	+	(TCCTCC)n	Simple_repeat	1	315	(0)	344839
55	22.1	6.7	0.0	chr1	232384427	232384591	(16571831)	+	(CT)n	Simple_repeat	1	176	(0)	344908
22	7.9	2.3	4.4	chr1	232630076	232630119	(16326303)	+	(CTC)n	Simple_repeat	1	45	(0)	345178
17	9.3	2.8	2.7	chr1	232630156	232630191	(16326231)	+	(CCGC)n	Simple_repeat	1	37	(0)	345179
83	16.5	3.8	5.3	chr1	232635351	232635586	(16320836)	+	GA-rich	Low_complexity	1	245	(0)	345185
131	6.5	1.9	3.3	chr1	232725248	232725457	(16230965)	+	(GGGAG)n	Simple_repeat	1	214	(0)	345335
183	26.4	1.9	3.6	chr1	232725534	232725588	(16230834)	+	L2b	LINE/L2	3297	3350	(25)	345336
762	27.3	5.7	1.8	chr1	232950980	232951251	(16005171)	C	Charlie4a	DNA/hAT-Charlie	(188)	320	38	345699
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
20	14.4	0.0	0.0	chr1	233295983	233296014	(15660408)	+	(T)n	Simple_repeat	1	32	(0)	346167
14	3.3	9.1	2.8	chr1	234317385	234317417	(14639005)	+	(CTCCTT)n	Simple_repeat	1	36	(0)	347665
166	24.5	3.8	4.8	chr1	234397200	234397863	(14558559)	+	G-rich	Low_complexity	1	689	(0)	347808
26	44.7	0.0	0.0	chr1	234520468	234520629	(14435793)	+	(TGTG)n	Simple_repeat	1	162	(0)	348023
296	29.1	9.1	6.6	chr1	234520679	234520891	(14435531)	+	MIRc	SINE/MIR	4	222	(46)	348024
30	19.7	3.3	3.2	chr1	234544489	234544580	(14411842)	+	G-rich	Low_complexity	1	95	(0)	348058
34	26.1	1.6	1.4	chr1	234546919	234547040	(14409382)	+	GA-rich	Low_complexity	1	122	(0)	348062
346	30.9	11.7	5.5	chr1	234547192	234547390	(14409032)	+	MIRb	SINE/MIR	25	237	(25)	348063
13	20.5	2.6	0.0	chr1	234555105	234555143	(14401279)	+	(CCTCCCC)n	Simple_repeat	1	40	(0)	348080
16	17.7	2.6	0.0	chr1	234609455	234609492	(14346930)	+	(GCC)n	Simple_repeat	1	39	(0)	348164
19	7.2	0.0	0.0	chr1	234609516	234609544	(14346878)	+	(GGA)n	Simple_repeat	1	29	(0)	348165
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
12	14.4	0.0	0.0	chr1	234724911	234724934	(14231488)	+	(GAGG)n	Simple_repeat	1	24	(0)	348336
30	7.9	5.6	0.0	chr1	234738030	234738083	(14218339)	+	(GAGAGAG)n	Simple_repeat	1	57	(0)	348354
27	15.5	3.9	3.8	chr1	234738084	234738097	(14218325)	+	GA-rich	Low_complexity	28	80	(0)	348355
16	5.3	0.0	0.0	chr1	234746083	234746102	(14210320)	+	(AG)n	Simple_repeat	1	20	(0)	348372
14	12.6	0.0	7.5	chr1	234760507	234760546	(14195876)	+	G-rich	Low_complexity	1	40	(0)	348398
2211	10.1	1.7	0.7	chr1	235049932	235050229	(13906193)	+	AluSx1	SINE/Alu	1	301	(11)	348913
1398	16.3	9.3	3.0	chr1	235112353	235112622	(13843800)	C	AluJb	SINE/Alu	(23)	289	1	349056
57	16.8	6.0	2.8	chr1	235302145	235302367	(13654055)	+	GA-rich	Low_complexity	1	230	(0)	349443
1134	17.2	5.5	1.2	chr1	235302381	235302639	(13653783)	+	Charlie5	DNA/hAT-Charlie	2354	2624	(0)	349444
594	27.6	20.0	2.0	chr1	235411759	235412157	(13544265)	+	L2	LINE/L2	1723	2211	(1208)	349695
61	4.6	2.0	4.0	chr1	235412158	235412256	(13544166)	+	(TCCCC)n	Simple_repeat	1	101	(0)	349696
1729	17.5	0.4	0.0	chr1	235412264	235412526	(13543896)	C	AluSx1	SINE/Alu	(45)	267	4	349697
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
1368	26.1	10.5	4.7	chr1	235864945	235865509	(13090913)	+	L2a	LINE/L2	2822	3422	(4)	350497
27	23.7	5.3	2.0	chr1	235919464	235919530	(13036892)	+	(TC)n	Simple_repeat	1	70	(0)	350632
3189	17.8	3.9	0.8	chr1	235919531	235920171	(13036251)	C	L1MB5	LINE/L1	(0)	6174	5513	350633
958	15.8	0.6	1.8	chr1	236063641	236063804	(12892618)	+	FRAM	SINE/Alu	1	162	(14)	350911
284	14.6	3.5	0.0	chr1	236063806	236063860	(12892562)	+	Charlie4a	DNA/hAT-Charlie	430	486	(22)	350912
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
421	28.0	9.8	2.0	chr1	236147109	236147238	(12809184)	C	LTR78B	LTR/ERV1	(189)	1107	964	351093
12	14.4	0.0	0.0	chr1	236176741	236176764	(12779658)	+	(CCTC)n	Simple_repeat	1	24	(0)	351143
4874	6.0	6.8	9.6	chr1	236349320	236349832	(12606590)	C	MER4E	LTR/ERV1	(0)	766	276	351439
2138	11.9	2.3	0.0	chr1	236349833	236350127	(12606295)	+	AluSx	SINE/Alu	4	305	(7)	351440
13	21.9	2.3	2.2	chr1	236395330	236395373	(12561049)	+	(TCCCGGC)n	Simple_repeat	1	45	(0)	351538
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
1459	22.6	1.8	2.4	chr1	236516626	236516960	(12439462)	+	L1MC5a	LINE/L1	1856	2188	(589)	351809
758	19.4	5.0	1.7	chr1	236516961	236517133	(12439289)	+	L1MC5	LINE/L1	9094	9272	(32)	351810
20	15.7	7.3	2.7	chr1	236686381	236686448	(12269974)	+	G-rich	Low_complexity	1	73	(0)	352104
11	25.6	0.0	2.5	chr1	237044746	237044785	(11911637)	+	(CTCCACC)n	Simple_repeat	1	40	(0)	352683
52	17.4	8.6	2.1	chr1	237051138	237051319	(11905103)	+	(CCTTTC)n	Simple_repeat	1	193	(0)	352688
26	0.0	0.0	0.0	chr1	237051320	237051344	(11905078)	+	(CCCTC)n	Simple_repeat	1	25	(0)	352689
40	31.5	5.8	0.9	chr1	237051345	237051369	(11905053)	+	(CTCTCT)n	Simple_repeat	3	30	(0)	352690
310	33.5	15.3	2.6	chr1	237485767	237486265	(11470157)	C	L2	LINE/L2	(454)	2965	2392	353396
20	6.1	2.8	2.7	chr1	240109847	240109882	(8846540)	+	(TTA)n	Simple_repeat	1	37	(0)	357163
402	31.2	4.8	3.0	chr1	240110196	240110360	(8846062)	+	MIRc	SINE/MIR	17	184	(84)	357164
67	0.0	0.0	0.0	chr1	240465331	240465387	(8491035)	+	(TG)n	Simple_repeat	1	57	(0)	357671
21	12.2	2.8	0.0	chr1	240611917	240611957	(8344465)	+	(TC)n	Simple_repeat	1	42	(0)	357925
13	13.2	0.0	0.0	chr1	240776367	240776391	(8180031)	+	(CCTC)n	Simple_repeat	1	25	(0)	358245
17	15.8	2.3	2.2	chr1	240776415	240776458	(8179964)	+	(CCTCCTC)n	Simple_repeat	1	45	(0)	358246
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
19	5.8	5.3	2.5	chr1	241902539	241902576	(7053846)	+	(AGGGAG)n	Simple_repeat	1	40	(0)	360043
17	6.3	2.7	5.3	chr1	241999149	241999185	(6957237)	+	(CCTCTCC)n	Simple_repeat	1	38	(0)	360296
242	8.7	22.0	0.0	chr1	243916964	243917009	(5039413)	+	MIR	SINE/MIR	114	172	(90)	363307
16	15.3	2.0	6.0	chr1	244048506	244048554	(4907868)	+	GA-rich	Low_complexity	1	50	(0)	363520
34	19.5	0.0	0.0	chr1	244048593	244048664	(4907758)	+	(C)n	Simple_repeat	1	72	(0)	363521
26	27.2	3.7	1.8	chr1	244048665	244048698	(4907724)	+	(CGCC)n	Simple_repeat	4	113	(0)	363522
26	9.5	0.0	5.8	chr1	244083348	244083399	(4873023)	+	(CTCC)n	Simple_repeat	1	52	(0)	363562
4090	22.3	6.6	2.0	chr1	244263158	244263344	(4693078)	+	L1M5	LINE/L1	3519	3733	(2413)	363845
52	27.4	2.0	0.0	chr1	244263349	244263495	(4692927)	+	GA-rich	Low_complexity	1	150	(0)	363847
377	20.0	0.0	4.3	chr1	244263509	244263602	(4692820)	+	L1M5	LINE/L1	3750	3839	(2307)	363845
1888	11.6	8.2	0.9	chr1	244396128	244396467	(4559955)	C	ERVL-int	LTR/ERVL	(2464)	3250	2884	364132
2500	19.7	11.2	0.2	chr1	244659255	244659803	(4296619)	C	MLT1E2	LTR/ERVL-MaLR	(3)	624	8	364513
347	16.4	0.0	0.0	chr1	244662424	244662478	(4293944)	C	L1MC	LINE/L1	(1543)	4603	4549	364518
436	26.4	10.5	7.6	chr1	244662596	244662845	(4293577)	C	L2a	LINE/L2	(141)	3285	3028	364519
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
220	24.3	5.1	2.6	chr1	244866430	244866505	(4089917)	C	MIR3	SINE/MIR	(15)	193	116	364915
1906	15.8	5.2	3.9	chr1	244901412	244901826	(4054596)	C	L1MC1	LINE/L1	(0)	6333	5913	365006
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
253	32.5	12.0	0.0	chr1	245092909	245093025	(3863397)	+	MIRc	SINE/MIR	117	249	(19)	365460
18	21.6	0.0	0.0	chr1	245093052	245093090	(3863332)	+	GA-rich	Low_complexity	1	39	(0)	365461
27	9.3	2.1	2.0	chr1	247337418	247337465	(1618957)	+	(GGA)n	Simple_repeat	1	49	(0)	368980
2169	20.4	2.2	0.7	chr1	247337473	247337926	(1618496)	C	MER88	LTR/ERVL	(0)	464	4	368981
3323	18.3	4.2	2.0	chr1	248826870	248827121	(129301)	C	MER67B	LTR/ERV1	(0)	661	401	370858
4035	23.1	5.4	0.2	chr10	521768	522822	(133274600)	C	L1MC1	LINE/L1	(1)	6332	5208	371590
15	5.6	0.0	0.0	chr10	1049464	1049482	(132747940)	+	(C)n	Simple_repeat	1	19	(0)	372220
193	26.0	7.2	7.2	chr10	1057569	1057651	(132739771)	C	AmnSINE1	SINE/5S-Deu-L2	(83)	492	410	372231
13	17.3	2.3	4.5	chr10	1269094	1269136	(132528286)	+	(CCCCT)n	Simple_repeat	1	44	(0)	372431
671	27.2	4.4	1.5	chr10	3086447	3086644	(130710778)	+	MER20	DNA/hAT-Charlie	16	219	(0)	374611
12	14.1	3.0	2.9	chr10	3086696	3086728	(130710694)	+	G-rich	Low_complexity	1	34	(0)	374612
608	23.1	5.9	0.0	chr10	3315323	3315482	(130481940)	+	L1MD3	LINE/L1	7739	7908	(87)	374923
30	18.5	0.0	0.0	chr10	3779011	3779065	(130018357)	+	(T)n	Simple_repeat	1	55	(0)	375554
13	26.2	2.7	5.2	chr10	3785987	3786061	(130011361)	+	(CCCCTC)n	Simple_repeat	1	77	(0)	375558
2079	9.6	0.3	4.1	chr10	5662237	5662527	(128134895)	+	AluSx	SINE/Alu	1	280	(32)	378085
25	3.0	0.0	0.0	chr10	5662532	5662565	(128134857)	+	(AGGGG)n	Simple_repeat	1	34	(0)	378086
84	1.3	0.0	0.0	chr10	5662566	5662644	(128134778)	+	(GAGAA)n	Simple_repeat	1	79	(0)	378087
2826	14.8	3.8	1.3	chr10	5774417	5774882	(128022540)	+	MER50-int	LTR/ERV1	4	481	(6724)	378263
30	7.0	2.2	0.0	chr10	5774887	5774931	(128022491)	+	(AGGGCA)n	Simple_repeat	1	46	(0)	378264
1846	18.3	0.7	0.0	chr10	5775016	5775294	(128022128)	+	AluJb	SINE/Alu	9	289	(23)	378265
19	12.0	0.0	2.6	chr10	5813435	5813472	(127983950)	+	(GGGAG)n	Simple_repeat	1	38	(0)	378339
297	21.1	3.8	0.0	chr10	5873504	5873579	(127923843)	+	L1ME4a	LINE/L1	6000	6078	(46)	378486
13	14.1	0.0	5.7	chr10	5958970	5959004	(127838418)	+	(CTCCC)n	Simple_repeat	1	35	(0)	378632
14	25.0	2.1	0.0	chr10	5959124	5959170	(127838252)	+	(TTTTTC)n	Simple_repeat	1	48	(0)	378633
387	32.0	3.0	4.0	chr10	7297299	7297500	(126499922)	+	MIRb	SINE/MIR	53	252	(16)	380795
20	12.4	0.0	0.0	chr10	7297506	7297574	(126499848)	+	(GGA)n	Simple_repeat	1	69	(0)	380796
2273	11.2	0.0	0.0	chr10	7436154	7436449	(126360973)	+	AluSg	SINE/Alu	2	297	(13)	381004
1814	15.8	4.2	1.0	chr10	7439356	7439653	(126357769)	C	AluJb	SINE/Alu	(4)	308	1	381010
1227	22.1	10.0	0.0	chr10	7813000	7813315	(125984107)	+	LTR16A	LTR/ERVL	4	354	(97)	381659
19	26.0	6.1	0.0	chr10	7813322	7813403	(125984019)	+	(CCCCAT)n	Simple_repeat	1	87	(0)	381660
315	23.8	9.3	6.7	chr10	7813406	7813540	(125983882)	+	LTR16A	LTR/ERVL	313	451	(0)	381659
1935	16.5	2.0	0.3	chr10	7987040	7987336	(125810086)	+	AluJb	SINE/Alu	1	302	(10)	381949
18	20.3	1.4	6.9	chr10	8054413	8054483	(125742939)	+	(CCCG)n	Simple_repeat	1	72	(0)	382057
16	11.2	7.7	0.0	chr10	8057178	8057216	(125740206)	+	(CTCCCT)n	Simple_repeat	1	42	(0)	382060
3147	10.2	1.1	0.0	chr10	11684191	11684643	(122112779)	+	L1PA10	LINE/L1	5679	6136	(32)	387324
19	13.4	0.0	0.0	chr10	11874620	11874653	(121922769)	+	(GGA)n	Simple_repeat	1	34	(0)	387682
24	17.7	1.2	8.3	chr10	12349458	12349540	(121447882)	+	GA-rich	Low_complexity	1	84	(0)	388745
14	4.9	0.0	0.0	chr10	12349652	12349672	(121447750)	+	(GCG)n	Simple_repeat	1	21	(0)	388746
2419	8.7	0.0	0.0	chr10	12764099	12764398	(121033024)	+	AluSq2	SINE/Alu	1	300	(13)	389536
14	7.6	7.1	0.0	chr10	13099324	13099351	(120698071)	+	(GTT)n	Simple_repeat	1	30	(0)	390107
62	10.8	1.9	0.9	chr10	13099351	13099454	(120697968)	+	(TCCC)n	Simple_repeat	1	106	(0)	390108
1292	20.4	4.6	1.0	chr10	13138912	13139204	(120658218)	C	L1MB1	LINE/L1	(6)	6162	5859	390174
16	9.6	0.0	0.0	chr10	13346719	13346741	(120450681)	+	(A)n	Simple_repeat	1	23	(0)	390592
373	29.7	7.1	14.6	chr10	13349618	13350063	(120447359)	C	L2	LINE/L2	(801)	2618	2209	390597
498	24.8	11.4	1.0	chr10	13356875	13357078	(120440344)	+	MER113B	DNA/hAT-Charlie	12	239	(63)	390617
54	14.4	1.6	4.8	chr10	13357189	13357311	(120440111)	+	(TCCT)n	Simple_repeat	1	125	(0)	390618
2370	8.3	0.7	0.0	chr10	13357312	13357601	(120439821)	C	AluSx1	SINE/Alu	(20)	292	1	390619
316	19.6	15.9	6.3	chr10	13536504	13536661	(120260761)	C	LTR41C	LTR/ERVL	(51)	650	475	390953
11	18.4	2.4	4.8	chr10	13788925	13788965	(120008457)	+	(CCTCCTC)n	Simple_repeat	1	42	(0)	391356
34	16.7	6.0	1.1	chr10	14174239	14174321	(119623101)	+	(CT)n	Simple_repeat	1	88	(0)	392027
30	10.2	0.0	5.1	chr10	14330928	14330994	(119466428)	+	(CTCC)n	Simple_repeat	1	63	(0)	392279
1407	23.5	11.1	6.9	chr10	15431312	15431600	(118365822)	C	L1MC5	LINE/L1	(239)	9065	8791	394247
3556	11.9	0.9	4.2	chr10	15431601	15431975	(118365447)	+	MER1A	DNA/hAT-Charlie	3	376	(153)	394249
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
246	29.6	10.7	2.3	chr10	15715948	15716075	(118081347)	+	Tigger16a	DNA/TcMar-Tigger	91	230	(727)	394699
642	30.8	7.9	1.7	chr10	15716075	15716418	(118081004)	+	Tigger16a	DNA/TcMar-Tigger	255	621	(336)	394700
30	26.0	3.3	0.0	chr10	15720440	15720530	(118076892)	+	(TG)n	Simple_repeat	1	94	(0)	394704
12	15.7	2.6	5.0	chr10	16521329	16521367	(117276055)	+	G-rich	Low_complexity	1	40	(0)	395982
86	35.9	3.2	0.6	chr10	16566352	16566818	(117230604)	+	GA-rich	Low_complexity	1	482	(0)	396061
2027	16.5	3.2	0.3	chr10	16942322	16942761	(116854661)	+	L1MD	LINE/L1	5219	5680	(500)	396606
80	9.8	2.5	4.3	chr10	16942768	16942925	(116854497)	+	G-rich	Low_complexity	1	162	(0)	396607
11	18.8	4.3	4.2	chr10	17228157	17228202	(116569220)	+	G-rich	Low_complexity	1	48	(0)	397004
12	22.1	0.0	0.0	chr10	17229093	17229124	(116568298)	+	(GGCCCA)n	Simple_repeat	1	32	(0)	397005
18	33.4	3.2	2.0	chr10	18196968	18197062	(115600360)	+	(CTCCC)n	Simple_repeat	1	98	(0)	398678
12	7.2	6.5	3.0	chr10	18400544	18400574	(115396848)	+	(TCCTCC)n	Simple_repeat	1	33	(0)	399040
26	14.9	3.3	1.6	chr10	19816105	19816165	(113981257)	+	G-rich	Low_complexity	1	63	(0)	401152
249	25.3	18.7	1.1	chr10	21299642	21299729	(112497693)	C	L2a	LINE/L2	(19)	3407	3301	403349
23	21.9	1.5	2.9	chr10	21299762	21299829	(112497593)	+	G-rich	Low_complexity	1	69	(0)	403350
2414	8.2	0.3	0.7	chr10	21312496	21312800	(112484622)	+	AluSp	SINE/Alu	1	304	(9)	403387
1495	14.2	6.2	8.7	chr10	21312801	21312908	(112484514)	C	L1MA4A	LINE/L1	(230)	6073	5964	403385
15	11.6	3.3	3.2	chr10	21315942	21315971	(112481451)	+	(TC)n	Simple_repeat	1	31	(0)	403393
2381	20.5	6.3	2.2	chr10	21372961	21373439	(112423983)	+	MLT1F1	LTR/ERVL-MaLR	1	509	(60)	403538
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
33	0.0	0.0	0.0	chr10	21510754	21510784	(112286638)	+	(T)n	Simple_repeat	1	31	(0)	403852
17	9.1	0.0	0.0	chr10	21518845	21518868	(112278554)	+	(T)n	Simple_repeat	1	24	(0)	403863
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
18	13.2	0.0	0.0	chr10	21526217	21526249	(112271173)	+	(GGGAG)n	Simple_repeat	1	33	(0)	403872
29	18.2	2.9	1.4	chr10	21534386	21534455	(112262967)	+	GA-rich	Low_complexity	1	72	(0)	403879
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
691	17.5	1.4	0.0	chr10	22438011	22438147	(111359275)	C	L1PB4	LINE/L1	(3)	6153	6015	405261
365	38.6	4.6	0.0	chr10	22479395	22479645	(111317777)	+	MamRTE1	LINE/RTE-BovB	2901	3163	(649)	405333
478	29.5	7.8	2.9	chr10	22616325	22616495	(111180927)	C	MIRb	SINE/MIR	(34)	234	55	405517
2078	13.1	0.8	5.1	chr10	22799757	22800127	(110997295)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	405832
1410	21.3	4.3	4.5	chr10	22800128	22800163	(110997259)	C	MER63B	DNA/hAT-Blackjack	(393)	43	9	405829
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
48	23.9	4.2	4.7	chr10	23344117	23344368	(110453054)	+	G-rich	Low_complexity	1	250	(0)	406652
1240	27.7	15.5	6.0	chr10	24716090	24717269	(109080153)	C	L2a	LINE/L2	(1)	3425	2114	408948
12	23.9	0.0	7.1	chr10	24722820	24722875	(109074547)	+	G-rich	Low_complexity	1	56	(0)	408953
16	3.5	3.0	5.9	chr10	24723960	24723992	(109073430)	+	(CCTCC)n	Simple_repeat	1	34	(0)	408956
15	22.0	0.0	5.7	chr10	25934809	25934861	(107862561)	+	G-rich	Low_complexity	1	53	(0)	410940
834	20.5	7.1	1.4	chr10	26524003	26524231	(107273191)	+	MER39	LTR/ERV1	9	232	(421)	411830
541	20.0	3.7	0.9	chr10	26524257	26524362	(107273060)	+	MER39	LTR/ERV1	361	469	(238)	411830
13	23.3	3.0	5.8	chr10	27155282	27155348	(106642074)	+	G-rich	Low_complexity	1	69	(0)	412953
388	27.8	9.0	6.9	chr10	27198126	27198299	(106599123)	C	L2b	LINE/L2	(4)	3422	3233	413049
320	23.4	6.9	4.7	chr10	27241226	27241310	(106556112)	+	MIRb	SINE/MIR	34	120	(148)	413145
31	5.9	0.0	0.0	chr10	27243093	27243128	(106554294)	+	(CA)n	Simple_repeat	1	36	(0)	413148
237	32.6	6.2	0.0	chr10	27243132	27243266	(106554156)	+	Helitron3Na_Mam	RC/Helitron	12	155	(331)	413149
158	18.1	2.5	5.7	chr10	27446570	27447015	(106350407)	+	(TCCT)n	Simple_repeat	1	457	(0)	413447
1195	29.5	8.0	6.4	chr10	28459550	28460077	(105337345)	C	L1M3d	LINE/L1	(5235)	656	187	415144
2656	4.3	0.0	0.0	chr10	28460078	28460380	(105337042)	C	AluY	SINE/Alu	(7)	304	2	415145
41	28.6	2.1	0.7	chr10	28533143	28533283	(105264139)	+	(GCG)n	Simple_repeat	1	144	(0)	415306
481	24.6	8.9	4.9	chr10	28587872	28588055	(105209367)	C	Charlie10a	DNA/hAT-Charlie	(75)	205	14	415403
518	25.8	6.6	7.0	chr10	28991998	28992210	(104805212)	C	L2c	LINE/L2	(0)	3387	3176	416095
710	24.8	8.0	0.5	chr10	29693075	29693281	(104104141)	C	MIR	SINE/MIR	(34)	228	5	417281
35	10.6	0.0	0.0	chr10	30219737	30219787	(103577635)	+	(GA)n	Simple_repeat	1	51	(0)	418275
275	21.8	13.9	3.3	chr10	30219811	30219930	(103577492)	+	L1MC4	LINE/L1	6376	6441	(3)	418273
14	22.5	0.0	0.0	chr10	30374745	30374781	(103422641)	+	(TATATG)n	Simple_repeat	1	37	(0)	418572
249	23.7	1.7	0.0	chr10	30436586	30436644	(103360778)	+	U7	snRNA	3	62	(1)	418708
26	10.1	1.6	6.5	chr10	31319141	31319201	(102478221)	+	G-rich	Low_complexity	1	62	(0)	420164
23	9.7	0.0	0.0	chr10	32055519	32055551	(101741871)	+	(CA)n	Simple_repeat	1	33	(0)	421234
1914	13.8	12.4	0.6	chr10	32948497	32948845	(100848577)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	422513
14	16.1	0.0	0.0	chr10	32951401	32951428	(100845994)	+	(CAC)n	Simple_repeat	1	28	(0)	422517
277	30.2	10.0	11.3	chr10	32951555	32951898	(100845524)	C	Tigger19b	DNA/TcMar-Tigger	(155)	395	57	422518
12	9.8	0.0	0.0	chr10	33490160	33490181	(100307241)	+	(GGAG)n	Simple_repeat	1	22	(0)	423336
841	18.4	6.6	1.2	chr10	34737529	34737828	(99059594)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	425192
24	15.5	2.0	0.0	chr10	34814822	34814871	(98982551)	+	(CCCGCC)n	Simple_repeat	1	51	(0)	425323
30	5.7	0.0	0.0	chr10	34815493	34815529	(98981893)	+	(CCTC)n	Simple_repeat	1	37	(0)	425326
17	35.0	0.0	0.0	chr10	35126760	35126834	(98670588)	+	(CCCCTC)n	Simple_repeat	1	75	(0)	426039
67	0.0	0.0	0.0	chr10	35431402	35431458	(98365964)	+	(CT)n	Simple_repeat	1	57	(0)	426582
60	27.1	6.0	0.0	chr10	35643632	35643847	(98153575)	+	(TC)n	Simple_repeat	1	229	(0)	426874
291	23.4	14.0	5.0	chr10	36367183	36367421	(97430001)	+	Arthur1B	DNA/hAT-Tip100	897	1160	(65)	427893
257	15.4	5.5	0.0	chr10	36367429	36367480	(97429942)	C	MER50B	LTR/ERV1	(140)	557	503	427894
36	24.3	1.1	0.0	chr10	36367483	36367572	(97429850)	+	G-rich	Low_complexity	1	91	(0)	427895
263	5.0	2.4	0.0	chr10	36367573	36367612	(97429810)	C	MER50C	LTR/ERV1	(180)	602	562	427896
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
15	16.4	2.2	4.3	chr10	43229415	43229459	(90567963)	+	G-rich	Low_complexity	1	46	(0)	433109
1175	17.4	12.5	9.7	chr10	43383682	43383991	(90413431)	+	7SLRNA	srpRNA	1	320	(0)	433392
31	0.0	0.0	2.9	chr10	43396888	43396921	(90400501)	+	(GGGAG)n	Simple_repeat	1	34	(0)	433409
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
13	19.8	1.6	8.1	chr10	43407227	43407287	(90390135)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	433435
28	11.6	4.6	3.7	chr10	43409350	43409420	(90388002)	+	G-rich	Low_complexity	1	71	(0)	433437
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
18	7.6	2.0	9.6	chr10	44064469	44064519	(89732903)	+	(CCCTC)n	Simple_repeat	1	52	(0)	434440
12471	10.7	1.7	2.7	chr10	44232714	44234189	(89563233)	C	L1PA8A	LINE/L1	(4935)	1548	56	434598
253	34.9	6.4	5.3	chr10	44326494	44326845	(89470577)	+	L2b	LINE/L2	2915	3288	(99)	434716
13	13.2	0.0	0.0	chr10	44326916	44326940	(89470482)	+	(AATG)n	Simple_repeat	1	25	(0)	434717
52	19.1	1.7	0.8	chr10	44397362	44397477	(89399945)	+	G-rich	Low_complexity	1	118	(0)	434806
293	32.1	10.8	0.8	chr10	44478853	44479103	(89318319)	C	L2	LINE/L2	(912)	2507	2229	434882
1020	15.8	6.2	0.0	chr10	44909818	44909982	(88887440)	+	AluJb	SINE/Alu	136	311	(1)	435400
31	9.6	1.6	4.7	chr10	44909983	44910045	(88887377)	+	GA-rich	Low_complexity	1	64	(0)	435401
1282	21.9	5.0	2.7	chr10	44910089	44910421	(88887001)	+	MER47A	DNA/TcMar-Tigger	26	366	(0)	435402
300	26.9	36.5	0.7	chr10	46545184	46545463	(87251959)	+	LTR16A2	LTR/ERVL	17	403	(92)	437840
280	37.0	6.0	1.1	chr10	47370904	47371094	(86426328)	C	L2b	LINE/L2	(1)	3374	3174	439098
28	28.8	7.3	0.0	chr10	47383888	47384023	(86413399)	+	GA-rich	Low_complexity	1	146	(0)	439114
13	15.5	0.0	3.2	chr10	47403118	47403148	(86394274)	+	GA-rich	Low_complexity	1	31	(0)	439130
44	26.4	2.4	0.0	chr10	47403240	47403362	(86394060)	+	(GT)n	Simple_repeat	1	126	(0)	439131
11	23.9	4.5	0.0	chr10	48463871	48463914	(85333508)	+	(TCACAGC)n	Simple_repeat	1	46	(0)	440571
249	34.2	14.0	1.6	chr10	48589404	48589783	(85207639)	+	L2	LINE/L2	2321	2755	(664)	440753
41	4.8	0.0	0.0	chr10	48650000	48650043	(85147379)	+	(GA)n	Simple_repeat	1	44	(0)	440824
20	0.0	0.0	0.0	chr10	48650147	48650168	(85147254)	+	(T)n	Simple_repeat	1	22	(0)	440825
18	31.3	0.0	1.6	chr10	49701004	49701064	(84096358)	+	(AT)n	Simple_repeat	1	61	(0)	442191
17	0.0	4.2	0.0	chr10	50993818	50993841	(82803581)	+	(TGT)n	Simple_repeat	1	25	(0)	444195
201	32.0	3.7	0.0	chr10	58273266	58273343	(75524079)	C	L2c	LINE/L2	(5)	3382	3302	453886
16	8.2	0.0	0.0	chr10	58334920	58334945	(75462477)	+	(GGCGG)n	Simple_repeat	1	26	(0)	453993
133	20.9	3.6	2.1	chr10	58481785	58482145	(75315277)	+	(CCTTC)n	Simple_repeat	1	374	(0)	454229
15	30.4	0.0	0.0	chr10	59176503	59176546	(74620876)	+	(CG)n	Simple_repeat	1	44	(0)	455189
24	16.9	9.3	1.8	chr10	59707199	59707274	(74090148)	+	GA-rich	Low_complexity	1	81	(0)	455970
92	2.3	0.0	0.0	chr10	59707276	59707365	(74090057)	+	(AGGGA)n	Simple_repeat	1	90	(0)	455971
1526	14.2	5.5	7.4	chr10	59707371	59707721	(74089701)	+	L1MA8	LINE/L1	5930	6273	(18)	455967
266	36.5	5.0	0.0	chr10	60757480	60757575	(73039847)	C	L2b	LINE/L2	(19)	3356	3256	457563
15	22.2	7.7	0.0	chr10	60944059	60944110	(72853312)	+	(GC)n	Simple_repeat	1	56	(0)	457856
21	10.3	4.8	0.0	chr10	61903867	61903908	(71893514)	+	(CCCCTCC)n	Simple_repeat	1	44	(0)	459253
13	26.3	0.0	2.1	chr10	62051038	62051084	(71746338)	+	(TCTTTT)n	Simple_repeat	1	47	(0)	459478
2215	10.5	2.0	0.3	chr10	63225502	63225795	(70571627)	+	AluSq2	SINE/Alu	1	299	(14)	461375
319	27.0	21.9	1.6	chr10	63225810	63226001	(70571421)	C	MIRb	SINE/MIR	(24)	244	3	461376
2267	8.9	0.3	1.0	chr10	63260599	63260889	(70536533)	C	AluSx3	SINE/Alu	(21)	290	2	461440
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
509	31.7	2.4	1.2	chr10	63713692	63713854	(70083568)	+	MIR3	SINE/MIR	30	194	(14)	462298
1999	14.1	0.9	1.8	chr10	65570387	65570726	(68226696)	+	MER61A	LTR/ERV1	1	337	(4)	464914
1677	23.0	4.2	7.1	chr10	65570727	65571292	(68226130)	+	MER61-int	LTR/ERV1	1	549	(4668)	464914
1088	15.8	3.2	0.0	chr10	68450373	68450555	(65346867)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	469237
240	21.5	8.1	0.0	chr10	68501415	68501493	(65295929)	+	FRAM	SINE/Alu	81	166	(0)	469375
17	29.1	6.9	1.8	chr10	68501504	68501605	(65295817)	+	A-rich	Low_complexity	1	109	(0)	469376
678	19.1	1.7	0.0	chr10	68501644	68501758	(65295664)	+	FLAM_A	SINE/Alu	4	120	(22)	469377
17	24.9	1.9	0.0	chr10	68560198	68560249	(65237173)	+	G-rich	Low_complexity	1	53	(0)	469546
21	12.1	0.0	0.0	chr10	69318820	69318855	(64478567)	+	(GAG)n	Simple_repeat	1	36	(0)	471359
18	29.1	4.1	1.3	chr10	69406720	69406792	(64390630)	+	(TC)n	Simple_repeat	1	76	(0)	471532
370	33.3	7.4	11.7	chr10	69666367	69666924	(64130498)	+	MamGypLTR1c	LTR/Gypsy	10	537	(266)	472027
28	4.5	4.0	3.9	chr10	69801822	69801871	(63995551)	+	(GGA)n	Simple_repeat	1	52	(0)	472288
281	32.1	9.7	0.0	chr10	69845754	69845893	(63951529)	+	MER5A	DNA/hAT-Charlie	35	189	(0)	472368
341	37.3	0.9	1.3	chr10	69901962	69902192	(63895230)	C	MER102a	DNA/hAT-Charlie	(0)	330	101	472459
426	25.2	5.0	0.9	chr10	70233923	70234038	(63563384)	+	MIR	SINE/MIR	105	225	(37)	473006
1216	20.4	9.8	7.8	chr10	70296915	70297384	(63500038)	+	MER110A	LTR/ERV1	5	477	(14)	473146
401	28.1	2.6	0.0	chr10	70297537	70297650	(63499772)	C	MIR3	SINE/MIR	(18)	190	74	473147
758	21.7	3.5	0.0	chr10	70325149	70325314	(63472108)	+	MER45C	DNA/hAT-Tip100	1	172	(781)	473202
806	30.5	10.8	3.1	chr10	70325365	70325746	(63471676)	+	MER45C	DNA/hAT-Tip100	281	695	(258)	473203
13	12.0	0.0	3.5	chr10	70529393	70529421	(63268001)	+	(TCCC)n	Simple_repeat	1	29	(0)	473665
3229	19.9	3.4	2.5	chr10	70575722	70576429	(63220993)	C	MER72	LTR/ERV1	(0)	722	9	473743
23	19.7	3.4	0.0	chr10	70759314	70759372	(63038050)	+	(TCTC)n	Simple_repeat	1	61	(0)	474076
283	27.4	5.6	0.6	chr10	71216077	71216216	(62581206)	C	MIRc	SINE/MIR	(49)	159	7	474807
2031	10.4	3.2	0.0	chr10	71270068	71270336	(62527086)	+	AluSx	SINE/Alu	1	278	(34)	474910
53	3.6	0.0	0.0	chr10	71270341	71270397	(62527025)	+	(AGGG)n	Simple_repeat	1	57	(0)	474911
344	32.1	13.3	3.3	chr10	71270398	71270765	(62526657)	C	L2a	LINE/L2	(483)	2936	2536	474909
14	18.1	0.0	7.8	chr10	71314514	71314564	(62482858)	+	(CCGCC)n	Simple_repeat	1	51	(0)	474984
15	24.8	7.0	0.0	chr10	71319440	71319517	(62477905)	+	(TC)n	Simple_repeat	1	83	(0)	474996
13	13.0	5.6	2.6	chr10	71603269	71603304	(62194118)	+	(TCCC)n	Simple_repeat	1	38	(0)	475587
635	23.5	17.5	2.3	chr10	71606541	71606849	(62190573)	C	L2a	LINE/L2	(0)	3426	3061	475595
29	0.0	0.0	0.0	chr10	71609290	71609316	(62188106)	+	(CTCTCC)n	Simple_repeat	1	27	(0)	475600
620	26.3	0.6	4.3	chr10	71664607	71664769	(62132653)	C	MIRb	SINE/MIR	(0)	268	112	475700
27	26.8	4.0	3.1	chr10	71664806	71664930	(62132492)	+	(CCTCCTC)n	Simple_repeat	1	130	(0)	475701
13	25.2	6.6	0.0	chr10	71811890	71811950	(61985472)	+	(CCCCTA)n	Simple_repeat	1	65	(0)	475954
35	6.7	2.1	0.0	chr10	71889322	71889368	(61908054)	+	(CT)n	Simple_repeat	1	48	(0)	476116
12	28.0	1.6	4.8	chr10	72096181	72096242	(61701180)	+	GA-rich	Low_complexity	1	63	(0)	476519
246	29.6	8.8	2.3	chr10	72320812	72320939	(61476483)	+	MIRc	SINE/MIR	85	221	(47)	477045
570	28.6	3.9	3.4	chr10	72321530	72321726	(61475696)	+	MIRb	SINE/MIR	48	239	(23)	477047
16	9.5	5.9	0.0	chr10	72321731	72321766	(61475656)	+	(CCTCTC)n	Simple_repeat	1	38	(0)	477048
12	19.9	0.0	0.0	chr10	72329498	72329526	(61467896)	+	(GCCT)n	Simple_repeat	1	29	(0)	477057
1290	18.0	0.4	1.3	chr10	72799962	72800186	(60997236)	+	Tigger4	DNA/TcMar-Tigger	1	223	(2508)	478063
1934	12.9	1.0	0.7	chr10	72800190	72800494	(60996928)	+	Tigger4	DNA/TcMar-Tigger	2424	2729	(2)	478064
11	32.1	2.8	2.7	chr10	72828446	72828516	(60968906)	+	(CTTCCC)n	Simple_repeat	1	73	(0)	478109
19	11.7	0.0	0.0	chr10	73095523	73095550	(60701872)	+	(A)n	Simple_repeat	1	28	(0)	478599
16	23.7	4.4	2.8	chr10	73168204	73168271	(60629151)	+	G-rich	Low_complexity	1	71	(0)	478773
35	0.0	0.0	0.0	chr10	73168309	73168340	(60629082)	+	(GAG)n	Simple_repeat	1	32	(0)	478774
16	19.1	4.0	1.9	chr10	73246748	73246797	(60550625)	+	(GTTCTCT)n	Simple_repeat	1	52	(0)	478920
17	13.7	8.8	1.8	chr10	73653715	73653768	(60143654)	+	G-rich	Low_complexity	1	57	(0)	479718
2144	7.1	0.0	0.8	chr10	73812077	73812380	(59985042)	C	AluSx3	SINE/Alu	(0)	311	16	479971
647	17.0	15.2	0.0	chr10	73908880	73908991	(59888431)	+	FLAM_C	SINE/Alu	1	132	(11)	480146
212	32.6	4.5	2.3	chr10	73957422	73957509	(59839913)	C	UCON132b	DNA/hAT-Tip100	(42)	106	17	480254
2346	9.3	1.0	0.0	chr10	73957640	73957940	(59839482)	C	AluSx3	SINE/Alu	(6)	305	2	480255
2191	11.5	0.0	1.0	chr10	73965389	73965693	(59831729)	C	AluSx	SINE/Alu	(10)	302	1	480276
210	33.6	16.8	3.0	chr10	74021058	74021287	(59776135)	+	L2c	LINE/L2	3015	3282	(105)	480410
1860	14.8	5.8	0.0	chr10	74025347	74025623	(59771799)	+	AluJb	SINE/Alu	1	294	(18)	480418
57	12.4	2.0	1.0	chr10	74025630	74025730	(59771692)	+	G-rich	Low_complexity	1	103	(0)	480419
422	24.2	10.3	4.3	chr10	74025766	74025784	(59771638)	+	MIR	SINE/MIR	74	90	(172)	480420
3492	11.6	16.8	0.7	chr10	74025785	74026394	(59771028)	C	LTR9A1	LTR/ERV1	(0)	728	1	480421
14	25.9	3.0	4.3	chr10	75284126	75284192	(58513230)	+	GA-rich	Low_complexity	1	69	(0)	482824
434	28.3	3.5	2.4	chr10	75294468	75294637	(58502785)	C	MamRep4096	DNA/hAT-Tip100	(254)	172	1	482840
17	23.4	3.9	6.6	chr10	75294650	75294751	(58502671)	+	G-rich	Low_complexity	1	106	(0)	482841
16	4.2	4.0	0.0	chr10	75401880	75401904	(58395518)	+	(CCG)n	Simple_repeat	1	26	(0)	483055
20	24.1	3.6	0.0	chr10	75402683	75402737	(58394685)	+	GA-rich	Low_complexity	1	57	(0)	483056
13	13.2	0.0	0.0	chr10	75403419	75403443	(58393979)	+	(GAGG)n	Simple_repeat	1	25	(0)	483057
14	22.0	3.6	3.5	chr10	75403952	75404007	(58393415)	+	(CTCCC)n	Simple_repeat	1	58	(0)	483058
17	0.0	4.0	0.0	chr10	75428873	75428899	(58368523)	+	(TGTTT)n	Simple_repeat	1	28	(0)	483099
23	27.2	1.1	4.4	chr10	75429049	75429138	(58368284)	+	(CTTTTC)n	Simple_repeat	1	91	(0)	483100
725	26.0	6.3	5.4	chr10	75546284	75546580	(58250842)	+	L1ME4a	LINE/L1	5790	6089	(35)	483271
21	20.5	3.9	0.0	chr10	75614133	75614183	(58183239)	+	(TC)n	Simple_repeat	1	53	(0)	483356
2537	14.1	6.0	1.3	chr10	75648978	75649437	(58147985)	C	L1MB3	LINE/L1	(39)	6144	5662	483406
14	15.3	7.1	5.0	chr10	75967751	75967806	(57829616)	+	GA-rich	Low_complexity	1	60	(0)	483867
17	16.5	2.9	0.0	chr10	77243836	77243869	(56553553)	+	GA-rich	Low_complexity	1	35	(0)	485589
108	14.1	2.1	4.5	chr10	77392093	77392334	(56405088)	+	G-rich	Low_complexity	1	247	(0)	485828
234	27.9	1.4	1.4	chr10	77392593	77392661	(56404761)	+	L2a	LINE/L2	3357	3425	(1)	485824
460	36.8	2.9	0.4	chr10	77486303	77486537	(56310885)	+	MIR	SINE/MIR	22	262	(0)	486011
41	11.9	0.0	0.0	chr10	77637464	77637528	(56159894)	+	(GAG)n	Simple_repeat	1	65	(0)	486308
38	4.8	0.0	0.0	chr10	77637587	77637630	(56159792)	+	(CCG)n	Simple_repeat	1	44	(0)	486309
237	23.6	5.3	0.0	chr10	77715165	77715236	(56082186)	C	MLT1K	LTR/ERVL-MaLR	(516)	79	4	486466
540	34.6	6.9	9.1	chr10	77715271	77715833	(56081589)	C	L3	LINE/CR1	(86)	4013	3464	486467
1488	25.6	8.6	6.9	chr10	77943668	77943882	(55853540)	C	L1ME3B	LINE/L1	(42)	6200	6019	486864
2392	7.0	0.7	0.0	chr10	78043016	78043302	(55754120)	C	AluY	SINE/Alu	(22)	289	1	487049
252	30.6	6.7	3.5	chr10	78043350	78043464	(55753958)	C	MIRb	SINE/MIR	(133)	135	17	487050
16	21.1	0.0	0.0	chr10	78303349	78303387	(55494035)	+	(CCTCC)n	Simple_repeat	1	39	(0)	487571
503	30.5	5.8	0.6	chr10	78619500	78619709	(55177713)	C	MIR	SINE/MIR	(38)	230	18	488149
45	11.8	6.5	2.6	chr10	78688959	78689066	(55108356)	+	(CCTCT)n	Simple_repeat	1	115	(0)	488256
897	24.5	13.8	3.8	chr10	78828086	78828476	(54968946)	C	LTR16	LTR/ERVL	(2)	436	1	488535
330	34.3	8.8	1.8	chr10	78828483	78828755	(54968667)	+	L3	LINE/CR1	3697	3990	(109)	488533
12	19.6	0.0	0.0	chr10	78973519	78973547	(54823875)	+	(CAGCC)n	Simple_repeat	1	29	(0)	488802
198	27.4	4.6	0.0	chr10	79048752	79048813	(54748609)	+	MIR3	SINE/MIR	61	125	(83)	488956
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
25	22.8	1.3	2.6	chr10	79070825	79070899	(54726523)	+	(CCTC)n	Simple_repeat	1	76	(0)	489004
79	4.9	0.0	0.0	chr10	79114457	79114541	(54682881)	+	(GT)n	Simple_repeat	1	85	(0)	489081
14	11.2	3.5	0.0	chr10	79114544	79114578	(54682844)	+	(GGAG)n	Simple_repeat	1	36	(0)	489082
345	28.3	11.4	6.8	chr10	79224044	79224293	(54573129)	+	L1ME4a	LINE/L1	5805	6067	(57)	489284
17	8.0	0.0	0.0	chr10	79293125	79293151	(54504271)	+	(CCACC)n	Simple_repeat	1	27	(0)	489393
18	14.9	0.0	2.6	chr10	79293269	79293307	(54504115)	+	(CCCCT)n	Simple_repeat	1	39	(0)	489394
222	20.7	8.4	4.0	chr10	79347828	79347922	(54449500)	+	MIR3	SINE/MIR	81	175	(93)	489470
185	37.8	13.4	1.4	chr10	79424377	79424743	(54372679)	+	L2	LINE/L2	2508	2925	(494)	489600
35	0.0	0.0	0.0	chr10	79446195	79446224	(54351198)	+	(GT)n	Simple_repeat	1	30	(0)	489641
17	8.3	0.0	0.0	chr10	80289490	80289515	(53507907)	+	(TTC)n	Simple_repeat	1	26	(0)	490994
720	24.3	7.4	1.8	chr10	84537192	84537409	(49260013)	C	MIR	SINE/MIR	(29)	233	3	497001
194	20.9	3.4	11.3	chr10	84537453	84537549	(49259873)	C	MIRc	SINE/MIR	(117)	151	63	497002
529	21.1	13.4	5.9	chr10	84665940	84666125	(49131297)	+	LTR50	LTR/ERVL	1	202	(593)	497179
1018	23.3	10.3	0.0	chr10	84666247	84666525	(49130897)	+	LTR50	LTR/ERVL	475	785	(10)	497179
209	25.4	10.0	0.0	chr10	86334652	86334714	(47462708)	C	L2b	LINE/L2	(49)	3326	3257	499324
237	23.7	9.5	0.0	chr10	86334685	86334760	(47462662)	C	MIRb	SINE/MIR	(63)	205	122	499325
831	33.1	8.3	2.0	chr10	86349791	86350451	(47446971)	C	L2b	LINE/L2	(7)	3368	2659	499347
30	16.5	0.0	5.3	chr10	86366807	86366881	(47430541)	+	(CCCCT)n	Simple_repeat	1	75	(0)	499372
12	18.1	0.0	3.0	chr10	86400604	86400636	(47396786)	+	(CCCCCT)n	Simple_repeat	1	33	(0)	499428
176	23.6	3.9	2.5	chr10	86594062	86594576	(47202846)	+	GA-rich	Low_complexity	30	552	(0)	499819
12	12.2	3.7	0.0	chr10	86668410	86668436	(47128986)	+	(GGCA)n	Simple_repeat	1	28	(0)	499941
254	28.1	10.1	1.1	chr10	86770496	86770585	(47026837)	+	LTR78B	LTR/ERV1	770	868	(428)	500114
494	28.5	15.5	2.9	chr10	86770628	86770869	(47026553)	+	LTR78B	LTR/ERV1	997	1274	(22)	500114
18	4.0	0.0	0.0	chr10	86958491	86958516	(46838906)	+	(CCTC)n	Simple_repeat	1	26	(0)	500475
180	36.2	4.1	3.1	chr10	87505755	87505851	(46291571)	C	L2b	LINE/L2	(0)	3375	3278	501379
17	16.1	0.0	0.0	chr10	87506007	87506035	(46291387)	+	(T)n	Simple_repeat	1	29	(0)	501380
190	18.8	0.0	0.0	chr10	87661046	87661077	(46136345)	+	L2c	LINE/L2	3344	3375	(12)	501623
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
427	26.3	16.1	3.2	chr10	88282527	88282560	(45514862)	+	MIRc	SINE/MIR	220	253	(15)	502627
17	23.4	7.5	1.4	chr10	88387197	88387263	(45410159)	+	GA-rich	Low_complexity	1	72	(0)	502762
16	12.8	2.8	2.7	chr10	89645039	89645074	(44152348)	+	(CTC)n	Simple_repeat	1	37	(0)	504723
368	34.0	7.9	2.8	chr10	91200665	91200879	(42596543)	+	MIRb	SINE/MIR	3	229	(39)	506963
1239	17.5	17.9	3.1	chr10	91201110	91201469	(42595953)	C	MSTC	LTR/ERVL-MaLR	(0)	428	4	506964
29	6.1	0.0	0.0	chr10	91909576	91909609	(41887813)	+	(TC)n	Simple_repeat	1	34	(0)	508070
29	15.5	1.5	2.9	chr10	92242987	92243054	(41554368)	+	(TTTGTT)n	Simple_repeat	1	69	(0)	508667
689	22.9	6.7	8.3	chr10	92544965	92545374	(41252048)	+	L1ME3A	LINE/L1	3860	4262	(1884)	509352
471	28.4	0.0	5.7	chr10	92849719	92849841	(40947581)	+	MIR3	SINE/MIR	34	149	(59)	510024
270	31.2	0.0	3.8	chr10	92849878	92849957	(40947465)	+	L2c	LINE/L2	3305	3381	(6)	510025
40	10.4	0.0	1.5	chr10	93116018	93116083	(40681339)	+	(AGGAGG)n	Simple_repeat	1	66	(0)	510482
504	23.5	19.7	1.1	chr10	93116084	93116529	(40680893)	+	LTR50	LTR/ERVL	152	789	(6)	510481
2263	7.1	0.0	1.1	chr10	93497837	93498117	(40299305)	+	AluSz	SINE/Alu	1	278	(34)	511243
20	21.1	0.0	0.0	chr10	93498143	93498181	(40299241)	+	A-rich	Low_complexity	1	39	(0)	511244
217	21.1	0.0	1.7	chr10	93542643	93542700	(40254722)	C	MIR3	SINE/MIR	(1)	207	151	511315
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
219	36.6	7.5	5.4	chr10	94006873	94007352	(39790070)	C	L2b	LINE/L2	(652)	2767	2277	512183
230	10.7	0.0	4.8	chr10	95260460	95260501	(38536921)	+	L2c	LINE/L2	3339	3417	(9)	513977
359	25.8	0.0	4.7	chr10	95273972	95274077	(38523345)	+	L4_C_Mam	LINE/RTE-X	2165	2265	(2873)	513997
198	33.1	14.6	3.2	chr10	95274160	95274293	(38523129)	+	L2a	LINE/L2	3031	3197	(229)	513998
470	13.1	0.0	0.0	chr10	95308899	95308959	(38488463)	C	AluYb8	SINE/Alu	(257)	61	1	514071
591	28.0	12.8	7.5	chr10	95374552	95374926	(38422496)	C	Tigger16a	DNA/TcMar-Tigger	(559)	398	1	514176
611	22.6	8.5	7.0	chr10	95431237	95431422	(38366000)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	514258
2394	8.7	0.0	0.0	chr10	95506861	95507160	(38290262)	C	AluSx	SINE/Alu	(12)	300	1	514391
13	8.5	4.0	0.0	chr10	95559771	95559795	(38237627)	+	(TCC)n	Simple_repeat	1	26	(0)	514498
3825	17.2	6.8	3.8	chr10	96124232	96125093	(37672329)	C	L1M4c	LINE/L1	(5493)	2074	1186	515430
11	17.2	7.7	0.0	chr10	96720027	96720065	(37077357)	+	(TCGCCTC)n	Simple_repeat	1	42	(0)	516502
15	14.0	4.9	2.3	chr10	96720767	96720807	(37076615)	+	(GAGGTG)n	Simple_repeat	1	43	(0)	516505
12	18.1	3.1	0.0	chr10	96720925	96720956	(37076466)	+	GA-rich	Low_complexity	1	33	(0)	516506
22	24.1	1.4	2.7	chr10	96832658	96832729	(36964693)	+	(CCTCCC)n	Simple_repeat	1	73	(0)	516803
28	0.0	0.0	0.0	chr10	97068134	97068160	(36729262)	+	(TGAA)n	Simple_repeat	1	27	(0)	517195
326	21.8	5.3	6.1	chr10	97068231	97068362	(36729060)	+	MIRc	SINE/MIR	32	162	(106)	517196
24	0.0	2.8	5.4	chr10	97185997	97186032	(36611390)	+	(CA)n	Simple_repeat	1	37	(0)	517412
27	18.2	0.0	1.7	chr10	97319464	97319521	(36477901)	+	GA-rich	Low_complexity	1	58	(0)	517719
24	20.4	0.0	1.7	chr10	97334505	97334562	(36462860)	+	(TCC)n	Simple_repeat	1	58	(0)	517742
15	22.1	2.0	2.0	chr10	97334636	97334684	(36462738)	+	(CGGAGC)n	Simple_repeat	1	50	(0)	517743
181	27.5	9.2	4.2	chr10	97494873	97494944	(36302478)	C	L2a	LINE/L2	(3)	3423	3348	518098
368	27.5	9.7	5.6	chr10	97524636	97525023	(36272399)	C	MLT1J	LTR/ERVL-MaLR	(50)	462	8	518148
2346	7.9	0.7	0.0	chr10	97567383	97567687	(36229735)	+	AluSq2	SINE/Alu	5	311	(2)	518225
17	4.0	0.0	3.6	chr10	97567833	97567860	(36229562)	+	(GGGGA)n	Simple_repeat	1	28	(0)	518226
15	31.5	3.4	4.9	chr10	97713625	97713743	(36083679)	+	GA-rich	Low_complexity	1	123	(0)	518570
15	16.6	0.0	0.0	chr10	97719015	97719041	(36078381)	+	(CA)n	Simple_repeat	1	27	(0)	518578
242	30.8	0.0	4.2	chr10	97773516	97773610	(36023812)	C	L2b	LINE/L2	(8)	3367	3277	518694
360	29.6	4.3	4.9	chr10	97889949	97890090	(35907332)	+	L1ME4b	LINE/L1	476	616	(276)	518963
684	25.9	5.8	9.8	chr10	98011497	98011783	(35785639)	+	L2a	LINE/L2	3151	3425	(1)	519178
15	11.6	0.0	0.0	chr10	98259306	98259333	(35538089)	+	(GGAGG)n	Simple_repeat	1	28	(0)	519606
19	19.9	7.4	0.0	chr10	98467481	98467534	(35329888)	+	GA-rich	Low_complexity	1	58	(0)	519973
569	34.7	8.9	3.6	chr10	99337178	99337801	(34459621)	+	L2c	LINE/L2	2721	3387	(0)	521297
516	29.3	16.0	4.9	chr10	99374728	99375514	(34421908)	C	L2c	LINE/L2	(0)	3387	2489	521360
260	31.7	7.4	4.3	chr10	99395923	99396156	(34401266)	+	L3	LINE/CR1	3663	3904	(195)	521393
240	31.2	9.0	4.7	chr10	99431457	99431604	(34365818)	+	L2c	LINE/L2	3047	3201	(186)	521450
557	26.8	10.0	1.8	chr10	99431631	99431858	(34365564)	+	MIR	SINE/MIR	14	262	(0)	521451
1929	19.7	5.8	2.4	chr10	99541285	99541736	(34255686)	C	L1ME3A	LINE/L1	(7)	6166	5699	521646
14	24.3	2.0	2.0	chr10	100654144	100654193	(33143229)	+	(GCCCG)n	Simple_repeat	1	51	(0)	523733
50	22.4	2.2	5.4	chr10	100655870	100656049	(33141373)	+	(TCC)n	Simple_repeat	1	184	(0)	523737
21	21.9	2.5	4.8	chr10	100656416	100656496	(33140926)	+	(CCGCC)n	Simple_repeat	1	83	(0)	523738
14	17.6	0.0	4.8	chr10	100684231	100684272	(33113150)	+	G-rich	Low_complexity	1	42	(0)	523801
16	30.8	6.4	0.0	chr10	100729456	100729549	(33067873)	+	(CCTCT)n	Simple_repeat	1	100	(0)	523887
14	13.8	0.0	5.6	chr10	100744304	100744339	(33053083)	+	G-rich	Low_complexity	1	36	(0)	523904
16	4.5	0.0	0.0	chr10	100803886	100803908	(32993514)	+	(AAAT)n	Simple_repeat	1	23	(0)	523987
561	30.3	14.4	0.7	chr10	101027008	101027477	(32769945)	+	L2a	LINE/L2	2667	3215	(211)	524359
458	30.4	1.2	12.2	chr10	101027478	101027657	(32769765)	+	MER5A1	DNA/hAT-Charlie	5	164	(2)	524360
22	9.3	4.0	3.9	chr10	101067125	101067174	(32730248)	+	G-rich	Low_complexity	1	52	(0)	524412
24	6.8	1.9	7.3	chr10	101073808	101073861	(32723561)	+	G-rich	Low_complexity	1	55	(0)	524423
12	13.7	5.3	8.3	chr10	101133629	101133685	(32663737)	+	(TGCCTG)n	Simple_repeat	1	60	(0)	524526
590	28.9	8.0	0.5	chr10	101211319	101211527	(32585895)	C	MIRc	SINE/MIR	(6)	262	37	524671
208	34.1	6.8	0.0	chr10	101211652	101211733	(32585689)	C	MER5A	DNA/hAT-Charlie	(43)	146	59	524672
231	22.5	11.2	1.4	chr10	101211666	101211737	(32585685)	+	MER5A	DNA/hAT-Charlie	69	148	(41)	524672
198	32.5	0.0	4.6	chr10	101211690	101211776	(32585646)	C	OldhAT1	DNA/hAT-Ac	(1302)	1546	1464	524673
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
18	29.4	2.0	4.0	chr10	101285909	101286006	(32511416)	+	(CCTCCCC)n	Simple_repeat	1	100	(0)	524813
24	38.0	1.3	2.5	chr10	101291916	101292074	(32505348)	+	(CCCTCC)n	Simple_repeat	1	161	(0)	524822
16	29.1	2.2	4.3	chr10	101292970	101293000	(32504422)	+	(CTCC)n	Simple_repeat	1	91	(0)	524825
16	31.9	1.7	0.0	chr10	101293001	101293058	(32504364)	+	(CT)n	Simple_repeat	1	59	(0)	524826
247	24.5	0.0	0.0	chr10	101293102	101293154	(32504268)	C	L2c	LINE/L2	(2)	3385	3333	524827
24	25.3	4.6	2.6	chr10	101293156	101293263	(32504159)	+	(CTCTCC)n	Simple_repeat	1	113	(0)	524828
14	4.0	7.7	0.0	chr10	101298292	101298317	(32499105)	+	(CAGG)n	Simple_repeat	1	28	(0)	524839
50	15.0	2.0	1.9	chr10	101490185	101490286	(32307136)	+	(TTCC)n	Simple_repeat	1	104	(0)	525189
502	32.2	8.0	0.5	chr10	101490337	101490545	(32306877)	C	MIRb	SINE/MIR	(15)	253	28	525190
12	15.3	5.3	2.5	chr10	101695111	101695148	(32102274)	+	(GCCCGA)n	Simple_repeat	1	40	(0)	525478
385	29.5	17.3	1.8	chr10	101759235	101759444	(32037978)	+	MIRb	SINE/MIR	4	256	(12)	525645
13	24.0	0.0	0.0	chr10	101759564	101759598	(32037824)	+	G-rich	Low_complexity	1	35	(0)	525646
1946	11.9	3.2	1.3	chr10	101815991	101816293	(31981129)	+	AluSx3	SINE/Alu	2	310	(1)	525731
19	14.5	4.2	2.0	chr10	101818126	101818173	(31979249)	+	(CCTCTC)n	Simple_repeat	1	50	(0)	525732
312	26.6	6.6	9.3	chr10	101819018	101819314	(31978108)	C	L2c	LINE/L2	(108)	3267	2973	525734
259	33.3	3.9	2.9	chr10	101819318	101819468	(31977954)	+	L2c	LINE/L2	3106	3247	(128)	525735
373	24.2	10.8	2.2	chr10	101841582	101841718	(31955704)	C	MIRc	SINE/MIR	(68)	200	59	525773
21	17.5	3.6	1.7	chr10	101893668	101893772	(31903650)	+	A-rich	Low_complexity	1	106	(0)	525860
343	26.5	11.1	2.2	chr10	102064962	102065085	(31732337)	+	L2a	LINE/L2	3287	3426	(0)	526214
695	26.3	5.3	2.2	chr10	102112171	102112409	(31685013)	C	MIRc	SINE/MIR	(26)	242	2	526315
21	23.5	1.5	2.9	chr10	102114921	102114997	(31682425)	+	(CTCC)n	Simple_repeat	1	75	(0)	526321
17	11.3	0.0	0.0	chr10	102115079	102115107	(31682315)	+	(AGGG)n	Simple_repeat	1	29	(0)	526322
17	17.7	6.6	3.1	chr10	102117635	102117695	(31679727)	+	(TCC)n	Simple_repeat	1	65	(0)	526326
13	31.4	1.4	2.8	chr10	102120569	102120638	(31676784)	+	G-rich	Low_complexity	1	71	(0)	526332
15	13.7	7.5	0.0	chr10	102120787	102120826	(31676596)	+	(GAGCCG)n	Simple_repeat	1	43	(0)	526333
14	0.0	0.0	0.0	chr10	102409249	102409266	(31388156)	+	(GCG)n	Simple_repeat	1	18	(0)	526867
12	7.7	3.2	6.2	chr10	102450116	102450146	(31347276)	+	GA-rich	Low_complexity	1	32	(0)	526949
20	6.7	0.0	3.0	chr10	102714290	102714322	(31083100)	+	(CCT)n	Simple_repeat	1	33	(0)	527438
1933	11.7	0.0	5.2	chr10	102715041	102715348	(31082074)	C	AluJb	SINE/Alu	(20)	292	1	527439
510	30.0	6.5	1.2	chr10	102728903	102729219	(31068203)	C	L2a	LINE/L2	(141)	3234	2904	527476
36	20.6	3.5	3.4	chr10	102743955	102744068	(31053354)	+	GA-rich	Low_complexity	1	118	(0)	527500
13	9.1	0.0	3.9	chr10	102918287	102918312	(30879110)	+	(CTCC)n	Simple_repeat	1	26	(0)	527858
29	0.0	7.9	0.0	chr10	103054591	103054628	(30742794)	+	(TGTTT)n	Simple_repeat	1	41	(0)	528157
539	29.9	4.2	2.9	chr10	103697087	103697324	(30100098)	+	MIR	SINE/MIR	22	262	(0)	529454
17	8.0	0.0	0.0	chr10	103739451	103739477	(30057945)	+	(GGGA)n	Simple_repeat	1	27	(0)	529541
22	16.6	2.1	0.0	chr10	103848195	103848241	(29949181)	+	(TCC)n	Simple_repeat	1	48	(0)	529763
13	10.4	2.9	5.6	chr10	103855524	103855558	(29941864)	+	(CGCT)n	Simple_repeat	1	36	(0)	529776
12	26.3	0.0	5.5	chr10	103855577	103855631	(29941791)	+	(GGCGG)n	Simple_repeat	1	55	(0)	529777
17	20.7	2.9	5.7	chr10	103855745	103855812	(29941610)	+	GA-rich	Low_complexity	1	70	(0)	529778
17	20.7	3.6	7.0	chr10	103855804	103855886	(29941536)	+	G-rich	Low_complexity	1	86	(0)	529779
539	25.1	4.5	2.7	chr10	103896173	103896430	(29900992)	C	L2a	LINE/L2	(0)	3426	3114	529859
13	21.2	9.8	3.0	chr10	104231968	104232059	(29565363)	+	G-rich	Low_complexity	1	101	(0)	530386
22	24.5	1.5	9.0	chr10	104233574	104233582	(29563840)	+	(TCCT)n	Simple_repeat	1	26	(108)	530391
31	20.6	4.4	1.1	chr10	104233583	104233673	(29563749)	+	(CTTCC)n	Simple_repeat	1	95	(0)	530392
22	24.5	1.5	9.0	chr10	104233674	104233705	(29563717)	+	(TCCT)n	Simple_repeat	27	134	(0)	530391
254	31.7	5.5	0.8	chr10	104233708	104233828	(29563594)	C	L2a	LINE/L2	(1)	3425	3299	530393
3071	14.2	7.9	4.9	chr10	104252957	104253548	(29543874)	C	LTR36	LTR/ERV1	(0)	611	1	530420
36	8.9	0.0	0.0	chr10	104329044	104329092	(29468330)	+	(CA)n	Simple_repeat	1	49	(0)	530536
718	20.0	16.7	5.7	chr10	109965920	109966002	(23831420)	+	L1MC5	LINE/L1	8986	9065	(239)	538686
14	30.7	0.0	0.0	chr10	110008207	110008254	(23789168)	+	(GGC)n	Simple_repeat	1	48	(0)	538775
198	26.1	0.0	0.0	chr10	110221958	110222003	(23575419)	C	UCON80_AMi	Unknown	(32)	190	145	539131
806	24.8	7.9	2.6	chr10	110384865	110385040	(23412382)	+	L1ME3G	LINE/L1	489	672	(252)	539382
421	26.8	0.0	1.0	chr10	110385142	110385239	(23412183)	C	MER47C	DNA/TcMar-Tigger	(0)	97	1	539385
21	14.7	2.8	8.1	chr10	110392895	110392966	(23404456)	+	(CCT)n	Simple_repeat	1	74	(0)	539402
279	29.3	15.6	3.6	chr10	110496172	110496447	(23300975)	+	L2b	LINE/L2	3048	3362	(13)	539643
2181	10.0	0.7	0.3	chr10	110566375	110566663	(23230759)	C	AluSx1	SINE/Alu	(22)	290	1	539790
14	8.5	0.0	0.0	chr10	110566664	110566677	(23230745)	+	(TATT)n	Simple_repeat	4	17	(0)	539791
2634	16.9	11.6	1.4	chr10	110699665	110700157	(23097265)	C	MER44B	DNA/TcMar-Tigger	(0)	550	1	540010
16	3.8	3.5	3.3	chr10	110717336	110717364	(23080058)	+	(CCT)n	Simple_repeat	1	30	(0)	540035
30	19.3	3.5	2.2	chr10	110919488	110919573	(22877849)	+	G-rich	Low_complexity	1	89	(0)	540372
24	9.6	0.0	6.0	chr10	110919593	110919642	(22877780)	+	GA-rich	Low_complexity	1	50	(0)	540373
14	19.6	6.1	1.9	chr10	111077020	111077068	(22720354)	+	(AGC)n	Simple_repeat	1	52	(0)	540554
186	28.8	12.0	1.5	chr10	112804057	112804123	(20993299)	+	X6A_LINE	LINE/CR1	291	365	(715)	543237
324	31.2	0.0	0.0	chr10	112833099	112833191	(20964231)	C	MER117	DNA/hAT-Charlie	(0)	197	105	543279
18	14.7	0.0	4.7	chr10	112950556	112950598	(20846824)	+	(CTCCC)n	Simple_repeat	1	43	(0)	543549
13	6.3	8.1	5.0	chr10	112951024	112951060	(20846362)	+	(CGG)n	Simple_repeat	1	40	(0)	543550
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
12	0.0	3.9	7.4	chr10	112952860	112952885	(20844537)	+	(CCCT)n	Simple_repeat	1	27	(0)	543553
240	27.9	7.5	1.1	chr10	113047915	113048001	(20749421)	C	MER103C	DNA/hAT-Charlie	(1)	296	204	543707
426	23.4	1.8	0.9	chr10	113047926	113048037	(20749385)	+	MER103C	DNA/hAT-Charlie	29	141	(156)	543708
13	3.8	0.0	11.4	chr10	114313043	114313077	(19484345)	+	G-rich	Low_complexity	1	35	(0)	545724
108	16.0	4.5	4.0	chr10	115004425	115004432	(18792990)	+	(CCTT)n	Simple_repeat	1	78	(222)	546924
116	7.9	8.4	3.2	chr10	115004433	115004693	(18792729)	+	(CTTCC)n	Simple_repeat	1	283	(0)	546925
12	6.5	12.5	0.0	chr10	115092939	115092970	(18704452)	+	G-rich	Low_complexity	1	36	(0)	547068
19	27.0	2.4	3.5	chr10	116849782	116849866	(16947556)	+	(CCTGCG)n	Simple_repeat	1	87	(0)	549480
19	0.0	0.0	0.0	chr10	116893577	116893597	(16903825)	+	(CA)n	Simple_repeat	1	21	(0)	549543
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
233	23.9	4.3	0.0	chr10	118332588	118332654	(15464768)	+	Charlie15b	DNA/hAT-Charlie	976	1045	(16)	551876
17	4.3	0.0	0.0	chr10	118332655	118332678	(15464744)	+	(CAAA)n	Simple_repeat	1	24	(0)	551877
62	22.2	1.2	3.5	chr10	118504374	118504542	(15292880)	+	GA-rich	Low_complexity	1	171	(0)	552161
317	34.1	5.1	7.8	chr10	118726363	118726683	(15070739)	C	L2c	LINE/L2	(3)	3384	3073	552490
19	15.4	3.7	3.6	chr10	118754225	118754278	(15043144)	+	G-rich	Low_complexity	1	56	(0)	552538
16	24.1	1.8	3.5	chr10	119029967	119030023	(14767399)	+	(GCG)n	Simple_repeat	1	58	(0)	553071
16	23.3	0.0	0.0	chr10	119030023	119030062	(14767360)	+	(CTC)n	Simple_repeat	1	40	(0)	553072
21	12.1	0.0	0.0	chr10	119030110	119030145	(14767277)	+	(CGA)n	Simple_repeat	1	36	(0)	553073
479	24.1	5.0	0.8	chr10	119166075	119166208	(14631214)	C	MER45A	DNA/hAT-Tip100	(0)	178	39	553370
475	23.9	11.4	2.2	chr10	119166393	119166617	(14630805)	+	MIRb	SINE/MIR	3	260	(2)	553371
359	29.4	13.9	0.6	chr10	119178325	119178492	(14618930)	C	MIRb	SINE/MIR	(20)	248	55	553394
28	0.0	0.0	0.0	chr10	119209488	119209514	(14587908)	+	(T)n	Simple_repeat	1	27	(0)	553469
413	31.1	3.2	0.0	chr10	119288330	119288448	(14508974)	+	L2a	LINE/L2	3301	3423	(3)	553624
186	29.6	9.0	0.0	chr10	119333292	119333362	(14464060)	C	MIRc	SINE/MIR	(117)	151	74	553713
389	21.6	1.7	3.3	chr10	119537989	119538108	(14259314)	+	Charlie18a	DNA/hAT-Charlie	131	248	(94)	554085
42	12.2	1.3	1.3	chr10	119538119	119538193	(14259229)	+	(AGGG)n	Simple_repeat	1	76	(0)	554086
37	23.4	1.0	1.9	chr10	119542653	119542755	(14254667)	+	GA-rich	Low_complexity	1	104	(0)	554096
18	7.6	0.0	0.0	chr10	119596640	119596667	(14200755)	+	(AGG)n	Simple_repeat	1	28	(0)	554192
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
26	20.4	2.6	2.5	chr10	119872895	119872905	(13924517)	+	(GCGCG)n	Simple_repeat	1	78	(0)	554724
19	15.8	9.2	1.4	chr10	119872906	119872970	(13924452)	+	(GGC)n	Simple_repeat	1	71	(0)	554725
393	25.3	4.9	8.2	chr10	119899797	119899949	(13897473)	C	L1MC4	LINE/L1	(13)	8029	7881	554769
432	29.8	2.9	1.2	chr10	119900057	119900226	(13897196)	C	L1MC4	LINE/L1	(119)	7923	7751	554769
15	4.1	4.0	0.0	chr10	120979824	120979848	(12817574)	+	(CCCGC)n	Simple_repeat	1	26	(0)	556460
308	32.4	9.1	1.1	chr10	120980712	120980892	(12816530)	+	MER113	DNA/hAT-Charlie	90	286	(235)	556461
36	30.7	5.6	0.0	chr10	121330530	121330689	(12466733)	+	(TCTC)n	Simple_repeat	1	169	(0)	556985
12	22.3	8.8	0.0	chr10	121928210	121928266	(11869156)	+	G-rich	Low_complexity	1	62	(0)	557960
242	23.6	0.0	5.3	chr10	122115371	122115446	(11681976)	+	MER20B	DNA/hAT-Charlie	29	100	(683)	558351
440	26.2	10.4	0.0	chr10	122115443	122115571	(11681851)	+	MER20B	DNA/hAT-Charlie	52	198	(21)	558352
270	19.4	1.5	1.5	chr10	122557764	122557831	(11239591)	+	Charlie15a	DNA/hAT-Charlie	142	209	(15)	559056
2330	10.7	0.0	0.3	chr10	122557843	122558150	(11239272)	+	AluSc	SINE/Alu	1	307	(2)	559057
39	0.0	0.0	0.0	chr10	122980724	122980759	(10816663)	+	(GCGGG)n	Simple_repeat	1	36	(0)	559574
746	28.9	11.1	1.6	chr10	123418711	123419019	(10378403)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	70	560277
301	34.7	10.2	0.0	chr10	123419151	123419326	(10378096)	+	L2b	LINE/L2	3178	3373	(2)	560278
18	23.2	1.8	1.7	chr10	124605810	124605866	(9191556)	+	G-rich	Low_complexity	1	58	(0)	562216
298	24.7	8.6	4.0	chr10	124648415	124648559	(9148863)	+	MIRc	SINE/MIR	54	197	(65)	562253
316	33.3	1.7	0.0	chr10	124667915	124668031	(9129391)	C	MIRb	SINE/MIR	(128)	140	22	562280
17	18.7	5.2	3.3	chr10	125451444	125451501	(8345921)	+	(CCT)n	Simple_repeat	1	61	(0)	563541
280	23.9	12.4	4.9	chr10	125633499	125633661	(8163761)	C	L1ME4c	LINE/L1	(39)	791	615	563809
373	25.4	5.3	3.8	chr10	125798264	125798394	(7999028)	+	MIRc	SINE/MIR	116	248	(20)	564017
2071	10.6	2.9	0.0	chr10	126190991	126191293	(7606129)	C	AluSz6	SINE/Alu	(0)	312	1	564538
305	29.8	9.6	3.6	chr10	126191295	126191569	(7605853)	C	L2c	LINE/L2	(556)	2863	2571	564534
27	26.2	4.7	3.0	chr10	126229600	126229726	(7567696)	+	(CTCTCC)n	Simple_repeat	1	133	(0)	564584
49	0.0	8.1	0.0	chr10	128210368	128210429	(5586993)	+	(CGGGGA)n	Simple_repeat	1	67	(0)	567180
193	38.0	4.2	1.1	chr10	129440515	129440607	(4356815)	+	L2b	LINE/L2	3250	3345	(30)	568511
23	27.9	3.5	1.1	chr10	129458804	129458890	(4338532)	+	(TCCC)n	Simple_repeat	1	90	(0)	568534
563	23.5	1.2	9.3	chr10	129458965	129459083	(4338339)	+	MIRb	SINE/MIR	69	179	(89)	568535
17	23.3	0.0	0.0	chr10	132036428	132036472	(1760950)	+	(CGGCGCC)n	Simple_repeat	1	45	(0)	571258
13	16.5	5.7	5.4	chr10	132176401	132176453	(1620969)	+	(CTG)n	Simple_repeat	1	56	(0)	571397
228	10.8	0.0	0.0	chr10	132176579	132176615	(1620807)	C	tRNA-His-CAY_	tRNA	(38)	37	1	571398
226	22.2	11.3	0.0	chr10	132266551	132266613	(1530809)	C	MIRb	SINE/MIR	(99)	169	99	571463
338	28.8	2.3	0.8	chr10	132331499	132331624	(1465798)	C	LTR16E1	LTR/ERVL	(3)	535	408	571544
3047	7.7	3.7	0.0	chr10	132335634	132336072	(1461350)	C	LTR71B	LTR/ERV1	(154)	456	1	571549
15	20.7	2.2	2.1	chr10	132419094	132419139	(1378283)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	571624
21	18.9	2.0	0.0	chr10	132444912	132444960	(1352462)	+	(AGCCCC)n	Simple_repeat	1	50	(0)	571647
19	32.0	0.7	7.2	chr10	132468330	132468466	(1328956)	+	A-rich	Low_complexity	1	138	(0)	571662
1229	9.9	1.2	0.0	chr10	132940580	132940741	(856681)	C	AluSx	SINE/Alu	(12)	300	137	572061
191	27.7	0.0	0.0	chr10	133159516	133159562	(637860)	C	L2b	LINE/L2	(2)	3373	3327	572210
190	27.8	8.5	8.5	chr11	789087	789192	(134297430)	C	MIR	SINE/MIR	(115)	147	42	573951
20	5.9	5.6	0.0	chr11	2302108	2302143	(132784479)	+	(GGAGA)n	Simple_repeat	1	38	(0)	575650
16	12.3	0.0	10.9	chr11	2315157	2315211	(132771411)	+	(CCCTC)n	Simple_repeat	1	55	(0)	575663
29	14.6	1.6	3.1	chr11	2391067	2391130	(132695492)	+	GA-rich	Low_complexity	1	65	(0)	575761
16	13.1	0.0	0.0	chr11	3160669	3160693	(131925929)	+	(C)n	Simple_repeat	1	25	(0)	576654
410	33.0	9.2	4.1	chr11	3161893	3162376	(131924246)	C	L2	LINE/L2	(353)	3066	2556	576655
13	16.6	7.3	0.0	chr11	3797686	3797726	(131288896)	+	GA-rich	Low_complexity	1	44	(0)	577721
21	17.2	3.1	4.5	chr11	4393705	4393768	(130692854)	+	GA-rich	Low_complexity	1	66	(0)	578776
56	0.0	0.0	0.0	chr11	6259502	6259549	(128827073)	+	(TC)n	Simple_repeat	1	48	(0)	581035
20	26.3	0.0	6.5	chr11	6259746	6259837	(128826785)	+	G-rich	Low_complexity	1	92	(0)	581036
17	29.6	0.0	2.9	chr11	6611930	6611998	(128474624)	+	(CCCCG)n	Simple_repeat	1	69	(0)	581578
16	11.0	7.7	0.0	chr11	7252022	7252060	(127834562)	+	(GGCTCG)n	Simple_repeat	1	42	(0)	582444
568	32.5	17.3	2.4	chr11	7275211	7275787	(127810835)	+	L2c	LINE/L2	1814	2494	(925)	582475
18	15.3	5.3	0.0	chr11	8263607	8263644	(126822978)	+	GA-rich	Low_complexity	1	40	(0)	583744
11	11.6	6.9	0.0	chr11	8328865	8328893	(126757729)	+	(TTCCTG)n	Simple_repeat	1	31	(0)	583843
563	31.5	8.8	7.7	chr11	8728574	8728900	(126357722)	+	L2c	LINE/L2	3056	3386	(1)	584390
15	27.3	3.2	1.5	chr11	8871239	8871301	(126215321)	+	GA-rich	Low_complexity	1	65	(0)	584652
3415	21.9	7.3	3.7	chr11	10205327	10207390	(124879232)	+	L1MDa	LINE/L1	143	2062	(4571)	587188
16	12.7	6.7	2.1	chr11	10792708	10792752	(124293870)	+	G-rich	Low_complexity	1	48	(0)	588141
16	22.1	6.8	0.0	chr11	10808762	10808820	(124277802)	+	A-rich	Low_complexity	1	63	(0)	588158
15	31.9	2.1	7.0	chr11	10931608	10931747	(124154875)	+	G-rich	Low_complexity	1	143	(0)	588402
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
15	5.6	0.0	0.0	chr11	12319441	12319459	(122767163)	+	(T)n	Simple_repeat	1	19	(0)	590606
12	19.5	2.1	6.2	chr11	12319580	12319626	(122766996)	+	G-rich	Low_complexity	1	48	(0)	590607
15	9.1	0.0	0.0	chr11	12679122	12679145	(122407477)	+	(TGG)n	Simple_repeat	1	24	(0)	591163
14	18.4	2.7	0.0	chr11	12724756	12724792	(122361830)	+	(TCCCC)n	Simple_repeat	1	38	(0)	591228
11	14.8	4.9	4.7	chr11	13277392	13277432	(121809190)	+	G-rich	Low_complexity	1	43	(0)	592124
40	0.0	0.0	0.0	chr11	13284078	13284111	(121802511)	+	(GT)n	Simple_repeat	1	34	(0)	592134
676	22.1	11.1	1.8	chr11	13928633	13928849	(121157773)	C	MIR	SINE/MIR	(3)	259	19	593048
723	29.1	5.7	0.8	chr11	13928854	13929102	(121157520)	+	MIR	SINE/MIR	1	262	(0)	593049
21	6.6	0.0	0.0	chr11	13962709	13962740	(121123882)	+	(GCTCA)n	Simple_repeat	1	32	(0)	593101
13	23.9	0.0	4.2	chr11	13966168	13966215	(121120407)	+	(CCTCTTC)n	Simple_repeat	1	48	(0)	593106
356	20.0	1.5	0.0	chr11	14059481	14059545	(121027077)	C	L2b	LINE/L2	(2)	3373	3308	593258
403	27.5	6.1	5.6	chr11	14423182	14423343	(120663279)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	4	593921
17	20.7	3.4	3.3	chr11	14907931	14907989	(120178633)	+	(GGAGCA)n	Simple_repeat	1	61	(0)	594664
13	25.9	1.9	1.9	chr11	14969949	14970000	(120116622)	+	(CTCCTG)n	Simple_repeat	1	53	(0)	594763
589	17.9	6.4	0.0	chr11	14970257	14970373	(120116249)	+	MER63D	DNA/hAT-Blackjack	1	125	(936)	594764
20	20.5	1.3	6.5	chr11	16606964	16607004	(118479618)	+	(CTCCCC)n	Simple_repeat	1	75	(0)	597234
16	9.8	6.1	0.0	chr11	16607005	16607037	(118479585)	+	(CCT)n	Simple_repeat	1	35	(0)	597235
13	15.0	2.4	4.8	chr11	16607057	16607097	(118479525)	+	(CGCCCGG)n	Simple_repeat	1	42	(0)	597236
13	30.3	4.0	1.3	chr11	16607821	16607894	(118478728)	+	(CAGG)n	Simple_repeat	1	77	(0)	597238
16	21.4	0.0	5.6	chr11	16925889	16925942	(118160680)	+	G-rich	Low_complexity	1	54	(0)	597709
1490	9.5	5.5	0.0	chr11	16959081	16959301	(118127321)	C	L1PA14	LINE/L1	(0)	6161	5928	597781
268	32.5	11.0	1.2	chr11	16982855	16983046	(118103576)	+	L2c	LINE/L2	2968	3176	(199)	597824
501	33.2	4.5	1.5	chr11	16983165	16983360	(118103262)	+	L3	LINE/CR1	3838	4039	(60)	597825
15	19.4	3.5	5.0	chr11	17276711	17276768	(117809854)	+	(GGCG)n	Simple_repeat	1	60	(0)	598473
19	17.4	0.0	0.0	chr11	17277489	17277522	(117809100)	+	GA-rich	Low_complexity	1	34	(0)	598474
14	21.5	2.2	2.2	chr11	17353526	17353570	(117733052)	+	G-rich	Low_complexity	1	46	(0)	598618
13	0.0	0.0	0.0	chr11	17353714	17353730	(117732892)	+	(GCA)n	Simple_repeat	1	17	(0)	598619
13	6.3	8.1	5.0	chr11	17476570	17476606	(117610016)	+	(CCT)n	Simple_repeat	1	40	(0)	598820
41	19.9	3.5	1.7	chr11	17735650	17735762	(117350860)	+	(CCCT)n	Simple_repeat	1	117	(0)	599230
16	8.5	4.0	0.0	chr11	19071442	19071466	(116015156)	+	(TG)n	Simple_repeat	1	26	(0)	601553
14	17.1	1.9	7.4	chr11	19071476	19071528	(116015094)	+	GA-rich	Low_complexity	1	54	(0)	601554
15	15.8	4.5	2.2	chr11	19241668	19241711	(115844911)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	601846
18	8.7	0.0	0.0	chr11	19241814	19241838	(115844784)	+	(T)n	Simple_repeat	1	25	(0)	601847
14	17.6	2.5	2.4	chr11	19345199	19345238	(115741384)	+	(CGGCAG)n	Simple_repeat	1	41	(0)	602038
242	25.3	13.0	6.7	chr11	20128118	20128282	(114958340)	+	MIR3	SINE/MIR	1	177	(31)	603390
236	32.4	0.7	8.1	chr11	27202075	27202222	(107884400)	+	AmnSINE1	SINE/5S-Deu-L2	224	360	(215)	613572
14	18.7	2.2	4.3	chr11	27699173	27699218	(107387404)	+	(TCCCC)n	Simple_repeat	1	47	(0)	614372
23	14.6	0.0	2.1	chr11	27718546	27718592	(107368030)	+	(CCCCT)n	Simple_repeat	1	47	(0)	614396
11	24.9	2.0	3.9	chr11	30585974	30585990	(104500632)	+	(CGGCTCC)n	Simple_repeat	1	51	(0)	618702
14	14.2	0.0	3.0	chr11	30585991	30586023	(104500599)	+	(CCGCCC)n	Simple_repeat	1	33	(0)	618703
15	13.7	4.8	2.3	chr11	31810589	31810630	(103275992)	+	(GCTCGCC)n	Simple_repeat	1	44	(0)	620439
17	18.6	7.3	0.0	chr11	31810721	31810775	(103275847)	+	G-rich	Low_complexity	1	59	(0)	620440
12	18.4	6.7	2.1	chr11	31812204	31812248	(103274374)	+	GA-rich	Low_complexity	1	48	(0)	620443
46	0.0	0.0	0.0	chr11	31812303	31812341	(103274281)	+	(TG)n	Simple_repeat	1	39	(0)	620444
197	35.4	2.5	0.0	chr11	31883303	31883381	(103203241)	+	MIR1_Amn	SINE/MIR	72	152	(78)	620569
16	10.0	0.0	7.9	chr11	32088693	32088730	(102997892)	+	(TCC)n	Simple_repeat	1	38	(0)	620981
259	28.6	13.3	1.9	chr11	33024868	33025038	(102061584)	+	MIRb	SINE/MIR	47	236	(32)	622673
625	28.8	21.0	2.2	chr11	33025096	33025503	(102061119)	+	L2a	LINE/L2	2918	3422	(4)	622674
298	31.3	12.0	6.4	chr11	33040662	33040989	(102045633)	+	L2c	LINE/L2	2914	3290	(97)	622696
2161	9.9	1.4	0.0	chr11	33263330	33263611	(101823011)	C	AluSz6	SINE/Alu	(25)	287	2	623172
355	22.8	0.0	0.0	chr11	33368899	33368977	(101717645)	+	MER5A1	DNA/hAT-Charlie	84	162	(4)	623372
28	23.1	2.5	6.5	chr11	33369085	33369204	(101717418)	+	(TTCCT)n	Simple_repeat	1	123	(0)	623373
19	21.2	5.3	1.7	chr11	33375999	33376055	(101710567)	+	(CG)n	Simple_repeat	1	60	(0)	623388
707	26.7	4.4	0.7	chr11	33721697	33721931	(101364691)	+	MIR	SINE/MIR	3	245	(23)	623960
13	16.2	2.7	2.6	chr11	34266598	34266634	(100819988)	+	(TCTCC)n	Simple_repeat	1	38	(0)	624948
13	18.1	0.0	3.0	chr11	35418834	35418866	(99667756)	+	(CCG)n	Simple_repeat	1	33	(0)	626739
12	19.1	2.6	2.6	chr11	35525618	35525655	(99560967)	+	G-rich	Low_complexity	1	39	(0)	626880
22	7.5	4.5	2.2	chr11	35678580	35678629	(99407993)	+	(TCCCC)n	Simple_repeat	1	51	(0)	627165
1724	16.0	4.6	0.0	chr11	35678632	35678899	(99407723)	C	AluSx1	SINE/Alu	(31)	281	1	627166
23	25.9	4.8	1.8	chr11	35943954	35944057	(99142565)	+	G-rich	Low_complexity	1	109	(0)	627608
37	27.8	1.8	0.0	chr11	36213019	36213136	(98873486)	+	(TCCCTC)n	Simple_repeat	1	120	(0)	628049
60	11.8	0.9	1.9	chr11	36376295	36376399	(98710223)	+	(GGA)n	Simple_repeat	1	106	(0)	628355
18	10.7	4.8	2.3	chr11	36376494	36376535	(98710087)	+	GA-rich	Low_complexity	1	44	(0)	628356
29	12.0	2.4	8.1	chr11	43580142	43580226	(91506396)	+	GA-rich	Low_complexity	1	87	(0)	638680
35	16.1	3.5	0.0	chr11	44310214	44310330	(90776292)	+	(CT)n	Simple_repeat	1	121	(0)	639878
28	14.0	8.7	3.0	chr11	44310277	44310333	(90776289)	+	(CCTCTC)n	Simple_repeat	5	67	(0)	639879
16	17.1	8.3	3.9	chr11	44310468	44310539	(90776083)	+	(TCTCCC)n	Simple_repeat	1	78	(0)	639880
1110	27.5	6.9	4.7	chr11	44614468	44615101	(90471521)	C	L2a	LINE/L2	(32)	3394	2752	640482
16	19.6	0.0	0.0	chr11	44621095	44621124	(90465498)	+	GA-rich	Low_complexity	1	30	(0)	640493
286	27.7	13.2	0.9	chr11	44635011	44635123	(90451499)	+	MIR	SINE/MIR	37	165	(97)	640520
18	3.1	5.7	2.7	chr11	45411737	45411771	(89674851)	+	(CTCTCC)n	Simple_repeat	1	37	(0)	642044
12	14.1	3.0	2.9	chr11	45805435	45805467	(89281155)	+	(CCTGC)n	Simple_repeat	1	34	(0)	642811
13	4.1	8.0	0.0	chr11	45922400	45922424	(89164198)	+	(GGGCA)n	Simple_repeat	1	27	(0)	643027
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
21	25.1	4.2	3.0	chr11	46121485	46121519	(88965103)	+	(CGCCCG)n	Simple_repeat	1	94	(0)	643317
26	7.9	7.3	1.7	chr11	46121520	46121574	(88965048)	+	(CCG)n	Simple_repeat	1	59	(0)	643318
13	10.4	4.5	11.6	chr11	46122043	46122108	(88964514)	+	(CCGGCAG)n	Simple_repeat	1	69	(0)	643321
12	22.5	2.3	2.3	chr11	46122338	46122380	(88964242)	+	(CCCG)n	Simple_repeat	1	44	(0)	643322
287	25.7	6.3	13.9	chr11	46237228	46237435	(88849187)	C	L2b	LINE/L2	(181)	3194	3004	643568
13	20.3	0.0	0.0	chr11	46278976	46279005	(88807617)	+	(TCCC)n	Simple_repeat	1	30	(0)	643665
17	4.3	4.2	0.0	chr11	46279166	46279189	(88807433)	+	(CA)n	Simple_repeat	1	25	(0)	643666
2184	12.7	0.0	1.0	chr11	46322571	46322878	(88763744)	+	AluSz	SINE/Alu	1	305	(7)	643768
2268	24.5	8.4	2.4	chr11	46322879	46323274	(88763348)	+	MLT1E1	LTR/ERVL-MaLR	212	654	(0)	643767
25	35.3	1.9	0.0	chr11	47155065	47155167	(87931455)	+	(CT)n	Simple_repeat	1	105	(0)	645359
566	25.4	2.3	3.6	chr11	47400745	47400965	(87685657)	+	L1M5	LINE/L1	5255	5472	(771)	645825
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
16	18.4	8.4	2.6	chr11	47553221	47553291	(87533331)	+	(GCGCCGA)n	Simple_repeat	1	77	(0)	646146
194	27.5	12.5	1.1	chr11	47594515	47594606	(87492016)	C	MIRc	SINE/MIR	(50)	218	115	646237
301	26.6	0.8	7.3	chr11	47870349	47870476	(87216146)	C	MIR	SINE/MIR	(0)	268	157	646945
40	34.7	2.0	0.0	chr11	47870508	47870656	(87215966)	+	(TCTC)n	Simple_repeat	1	152	(0)	646946
1762	15.9	1.0	4.1	chr11	47870657	47870971	(87215651)	C	AluJb	SINE/Alu	(7)	305	1	646947
26	28.3	2.2	5.0	chr11	57322379	57322514	(77764108)	+	(CCTC)n	Simple_repeat	1	139	(0)	653461
17	18.4	0.0	4.3	chr11	57473563	57473609	(77613013)	+	GA-rich	Low_complexity	1	47	(0)	653784
248	26.0	11.0	0.0	chr11	57493824	57493896	(77592726)	+	MIRc	SINE/MIR	117	198	(70)	653826
13	4.8	0.0	4.2	chr11	59172094	59172117	(75914505)	+	(GGGA)n	Simple_repeat	1	24	(0)	656440
12	17.6	4.0	5.8	chr11	59172219	59172268	(75914354)	+	(GCCGCCG)n	Simple_repeat	1	52	(0)	656441
1453	8.0	0.0	3.0	chr11	59537441	59537641	(75548981)	+	AluSx3	SINE/Alu	99	293	(18)	656915
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
12	25.7	3.4	3.3	chr11	59755744	59755802	(75330820)	+	(CCCTC)n	Simple_repeat	1	61	(0)	657378
482	18.4	8.3	0.9	chr11	61161998	61162160	(73924462)	+	LTR54B	LTR/ERV1	185	387	(111)	659604
405	32.7	4.9	1.4	chr11	61297892	61298108	(73788514)	C	MER134	DNA?	(0)	513	289	659892
295	24.1	4.4	0.0	chr11	61463830	61463916	(73622706)	C	L1MC	LINE/L1	(868)	5278	5188	660226
164	8.5	4.3	4.1	chr11	61463921	61464245	(73622377)	+	(CCTTC)n	Simple_repeat	1	339	(0)	660227
12	26.9	0.0	0.0	chr11	61523193	61523232	(73563390)	+	(TTCATC)n	Simple_repeat	1	40	(0)	660352
12	22.5	2.3	2.3	chr11	61816338	61816380	(73270242)	+	(CCACTCC)n	Simple_repeat	1	44	(0)	660880
181	30.3	7.3	2.6	chr11	61917965	61918042	(73168580)	+	OldhAT1	DNA/hAT-Ac	454	535	(2313)	661067
180	26.7	9.6	1.3	chr11	62544883	62544958	(72541664)	C	L2b	LINE/L2	(2)	3373	3291	662281
12	24.4	0.0	0.0	chr11	62553215	62553248	(72533374)	+	GA-rich	Low_complexity	1	34	(0)	662297
306	30.8	1.5	4.3	chr11	62804676	62804814	(72281808)	C	MIRb	SINE/MIR	(8)	260	126	662834
11	24.6	0.0	2.5	chr11	62831088	62831127	(72255495)	+	G-rich	Low_complexity	1	40	(0)	662904
933	18.1	2.8	0.0	chr11	63611099	63611269	(71475353)	C	AluJb	SINE/Alu	(0)	312	137	664000
12	18.0	2.0	7.7	chr11	63765476	63765526	(71321096)	+	(TCACC)n	Simple_repeat	1	52	(0)	664336
253	24.2	3.6	12.0	chr11	63765591	63765740	(71320882)	C	MIR3	SINE/MIR	(7)	201	65	664337
497	29.1	2.4	1.2	chr11	63767375	63767541	(71319081)	+	MIR3	SINE/MIR	18	186	(22)	664340
1935	11.8	0.0	0.0	chr11	63783773	63784044	(71302578)	+	AluSz6	SINE/Alu	1	272	(40)	664379
32	2.9	0.0	0.0	chr11	63784047	63784081	(71302541)	+	(GGGGA)n	Simple_repeat	1	35	(0)	664380
8126	16.4	7.7	7.2	chr11	63784082	63785309	(71301313)	+	L1MCa	LINE/L1	1345	2516	(5125)	664373
14	25.6	0.0	7.2	chr11	64028648	64028673	(71057949)	+	(CCCCTC)n	Simple_repeat	1	48	(21)	664877
12	20.2	2.9	0.0	chr11	64028674	64028707	(71057915)	+	(CCT)n	Simple_repeat	1	35	(0)	664878
14	25.6	0.0	7.2	chr11	64028708	64028716	(71057906)	+	(CCCCTC)n	Simple_repeat	49	69	(0)	664877
13	15.8	2.7	2.6	chr11	64086832	64086868	(70999754)	+	(GGCTGG)n	Simple_repeat	1	38	(0)	664982
47	22.2	3.7	4.1	chr11	64091009	64091171	(70995451)	+	GA-rich	Low_complexity	1	169	(0)	664987
15	12.2	0.0	0.0	chr11	64234903	64234929	(70851693)	+	(GCCC)n	Simple_repeat	1	27	(0)	665235
23	12.6	0.0	0.0	chr11	64244083	64244117	(70842505)	+	(A)n	Simple_repeat	1	35	(0)	665247
29	0.0	0.0	0.0	chr11	64271382	64271406	(70815216)	+	(CA)n	Simple_repeat	1	25	(0)	665284
2202	12.2	0.0	0.0	chr11	64276333	64276626	(70809996)	C	AluSx1	SINE/Alu	(18)	294	1	665300
12	16.4	5.9	0.0	chr11	64355142	64355175	(70731447)	+	(CCTCC)n	Simple_repeat	1	36	(0)	665458
1957	12.4	0.7	0.0	chr11	64356324	64356597	(70730025)	+	AluSz	SINE/Alu	34	309	(3)	665462
385	29.7	3.9	4.4	chr11	64356690	64356893	(70729729)	C	L2a	LINE/L2	(173)	3253	3051	665459
15	20.6	0.0	5.9	chr11	64409769	64409819	(70676803)	+	(CCTCTCC)n	Simple_repeat	1	51	(0)	665567
607	28.4	11.1	5.6	chr11	64566262	64566715	(70519907)	C	Tigger18a	DNA/TcMar-Tigger	(100)	752	260	665872
12	15.3	5.3	2.5	chr11	64743295	64743332	(70343290)	+	(CCCT)n	Simple_repeat	1	40	(0)	666146
17	10.4	0.0	3.0	chr11	64760086	64760118	(70326504)	+	(AGGAG)n	Simple_repeat	1	33	(0)	666171
18	25.2	4.8	2.3	chr11	64778514	64778620	(70308002)	+	(GCGGCGG)n	Simple_repeat	1	109	(0)	666183
15	19.1	1.9	5.6	chr11	64778569	64778621	(70308001)	+	G-rich	Low_complexity	1	54	(0)	666184
266	16.4	3.5	0.0	chr11	64847419	64847473	(70239149)	+	MIRc	SINE/MIR	63	119	(149)	666329
431	30.6	8.5	2.8	chr11	64997275	64997452	(70089170)	+	MIRb	SINE/MIR	16	204	(64)	666617
211	31.6	4.9	6.2	chr11	65043836	65043980	(70042642)	+	MIRc	SINE/MIR	1	143	(125)	666746
12	19.5	3.9	5.6	chr11	65113622	65113673	(69972949)	+	G-rich	Low_complexity	1	54	(0)	666879
319	24.4	14.9	4.2	chr11	65113703	65113869	(69972753)	C	L2a	LINE/L2	(0)	3426	3239	666880
29	21.7	1.1	5.3	chr11	65181833	65181926	(69904696)	+	GA-rich	Low_complexity	1	95	(0)	667023
1523	10.1	5.7	1.4	chr11	65381590	65381807	(69704815)	C	AluJo	SINE/Alu	(34)	278	51	667449
12	21.8	2.7	0.0	chr11	65471692	65471728	(69614894)	+	(CTGCCTG)n	Simple_repeat	1	38	(0)	667603
2079	11.9	0.0	0.7	chr11	65510351	65510673	(69575949)	C	AluSx1	SINE/Alu	(0)	312	1	667675
15	14.0	8.2	4.5	chr11	65558202	65558262	(69528360)	+	(AGGCAGG)n	Simple_repeat	1	66	(0)	667765
195	33.1	15.8	2.0	chr11	65559964	65560213	(69526409)	C	L2c	LINE/L2	(4)	3383	3093	667769
516	30.2	16.7	4.6	chr11	65560453	65560976	(69525646)	C	L2c	LINE/L2	(775)	2644	2045	667769
1930	11.7	1.1	0.0	chr11	65566462	65566726	(69519896)	C	AluSz	SINE/Alu	(43)	269	2	667788
291	22.6	6.4	6.4	chr11	65818452	65818560	(69268062)	+	MIRc	SINE/MIR	98	206	(62)	668225
2195	11.1	1.0	0.0	chr11	65873967	65874264	(69212358)	+	AluSx	SINE/Alu	1	301	(11)	668325
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
462	25.5	10.8	7.7	chr11	66022353	66022443	(69064179)	+	MIR	SINE/MIR	151	242	(26)	668661
214	25.0	16.1	0.0	chr11	66045069	66045136	(69041486)	+	MIRb	SINE/MIR	35	119	(149)	668724
651	27.9	6.5	1.0	chr11	66269645	66269847	(68816775)	+	MIRb	SINE/MIR	34	248	(20)	669150
18	4.2	0.0	0.0	chr11	67119342	67119366	(67967256)	+	(CGG)n	Simple_repeat	1	25	(0)	671005
796	29.7	11.7	4.6	chr11	67262772	67263512	(67823110)	C	L2b	LINE/L2	(228)	3198	2401	671330
13	16.2	0.0	0.0	chr11	67270543	67270570	(67816052)	+	(CTCC)n	Simple_repeat	1	28	(0)	671339
16	15.9	0.0	0.0	chr11	67357502	67357529	(67729093)	+	(GT)n	Simple_repeat	1	28	(0)	671486
17	22.7	3.5	1.7	chr11	67372991	67373048	(67713574)	+	(CCCT)n	Simple_repeat	1	60	(0)	671515
431	29.9	0.9	0.0	chr11	67417009	67417115	(67669507)	C	L2a	LINE/L2	(5)	3421	3314	671608
401	28.0	11.8	6.3	chr11	67436475	67436928	(67649694)	+	L2a	LINE/L2	2873	3380	(7)	671640
1909	17.1	1.9	6.5	chr11	67731221	67735527	(67351095)	+	SATR2	Satellite	1	4110	(45)	672154
14	12.7	0.0	0.0	chr11	68052671	68052696	(67033926)	+	(GGA)n	Simple_repeat	1	26	(0)	672682
13	19.2	2.2	4.3	chr11	68121610	68121654	(66964968)	+	G-rich	Low_complexity	1	46	(0)	672799
56	20.3	5.1	3.9	chr11	68865825	68866019	(66220603)	+	(TTTCC)n	Simple_repeat	1	205	(0)	674118
17	0.0	4.0	0.0	chr11	69700767	69700791	(65385831)	+	(CCAGG)n	Simple_repeat	1	26	(0)	675530
185	17.9	7.1	0.0	chr11	69717304	69717342	(65369280)	C	MIR3	SINE/MIR	(48)	160	119	675570
84	7.3	6.0	7.4	chr11	69717385	69717602	(65369020)	+	(CTC)n	Simple_repeat	1	231	(0)	675571
17	3.4	2.9	5.7	chr11	71204988	71205021	(63881601)	+	(CCTC)n	Simple_repeat	1	35	(0)	677864
16	8.6	4.9	4.7	chr11	71205022	71205028	(63881594)	+	(CCTCCCT)n	Simple_repeat	1	43	(0)	677865
20	26.8	1.3	2.6	chr11	71252674	71252748	(63833874)	+	(CGACCC)n	Simple_repeat	1	76	(0)	677939
28	13.4	3.5	0.0	chr11	71452992	71453048	(63633574)	+	G-rich	Low_complexity	1	59	(0)	678290
13	19.6	2.9	0.0	chr11	72354583	72354617	(62732005)	+	(CTCC)n	Simple_repeat	1	36	(0)	679794
219	36.4	3.7	7.8	chr11	72354783	72355038	(62731584)	+	L2c	LINE/L2	3092	3336	(51)	679795
2227	11.9	0.0	0.0	chr11	72362878	72363180	(62723442)	+	AluJb	SINE/Alu	5	307	(5)	679812
23	8.4	9.8	0.0	chr11	72363181	72363231	(62723391)	+	GA-rich	Low_complexity	1	56	(0)	679813
37	20.5	6.2	0.8	chr11	72377609	72377721	(62708901)	+	A-rich	Low_complexity	1	120	(0)	679844
1070	23.9	1.4	0.0	chr11	72377784	72378001	(62708621)	+	MER58A	DNA/hAT-Charlie	4	224	(0)	679845
18	25.1	3.3	0.0	chr11	72674363	72674423	(62412199)	+	(CTGCCG)n	Simple_repeat	1	63	(0)	680388
15	11.8	8.1	0.0	chr11	73141921	73141957	(61944665)	+	GA-rich	Low_complexity	1	40	(0)	681262
250	26.2	12.6	2.5	chr11	73384863	73385086	(61701536)	C	L2c	LINE/L2	(222)	3165	2918	681737
14	29.5	0.0	4.5	chr11	73598110	73598176	(61488446)	+	G-rich	Low_complexity	1	67	(0)	682198
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
17	24.0	3.3	1.6	chr11	73761468	73761528	(61325094)	+	G-rich	Low_complexity	1	63	(0)	682609
382	20.8	8.4	6.5	chr11	75031831	75031969	(60054653)	C	MIR3	SINE/MIR	(9)	199	58	685220
1947	14.2	0.0	2.3	chr11	75388024	75388333	(59698289)	C	AluJr	SINE/Alu	(9)	303	1	685953
17	13.7	0.0	0.0	chr11	75445547	75445578	(59641044)	+	(GAGG)n	Simple_repeat	1	32	(0)	686063
12	20.4	4.1	3.9	chr11	75524854	75524902	(59561720)	+	(CTCTCCC)n	Simple_repeat	1	51	(0)	686261
354	33.8	6.8	5.0	chr11	75524914	75525072	(59561550)	+	MIRb	SINE/MIR	104	265	(3)	686262
291	32.1	0.9	0.7	chr11	75554191	75554319	(59532303)	C	MIRc	SINE/MIR	(116)	152	23	686331
17	22.6	0.0	0.0	chr11	75554430	75554465	(59532157)	+	(CA)n	Simple_repeat	1	36	(0)	686332
15	19.9	4.3	0.0	chr11	75562064	75562109	(59524513)	+	G-rich	Low_complexity	1	48	(0)	686349
17	10.8	4.4	4.3	chr11	75583798	75583842	(59502780)	+	G-rich	Low_complexity	1	47	(0)	686391
18	19.6	1.7	5.1	chr11	75706476	75706533	(59380089)	+	(CCT)n	Simple_repeat	1	59	(0)	686604
610	26.8	11.6	4.2	chr11	75816468	75816681	(59269941)	C	MIRb	SINE/MIR	(8)	260	29	686820
216	32.4	0.0	1.4	chr11	76212949	76213017	(58873605)	+	MIR1_Amn	SINE/MIR	89	156	(74)	687534
675	1.3	0.0	0.0	chr11	76235513	76235587	(58851035)	+	tRNA-Pro-CCY	tRNA	1	75	(0)	687581
14	30.3	0.0	1.9	chr11	76381067	76381120	(58705502)	+	(CCG)n	Simple_repeat	1	54	(0)	687900
13	8.1	3.9	0.0	chr11	76455544	76455569	(58631053)	+	(TCCCC)n	Simple_repeat	1	27	(0)	688068
192	32.6	3.9	1.0	chr11	76771329	76771427	(58315195)	C	L2a	LINE/L2	(282)	3105	3004	688644
21	15.5	0.0	0.0	chr11	76782958	76782993	(58303629)	+	(CA)n	Simple_repeat	1	36	(0)	688673
17	23.6	5.6	1.3	chr11	76783061	76783131	(58303491)	+	G-rich	Low_complexity	1	75	(0)	688674
285	28.3	9.2	2.1	chr11	77101172	77101312	(57985310)	C	L2a	LINE/L2	(13)	3413	3262	689257
313	35.2	11.7	0.0	chr11	77101502	77101697	(57984925)	C	L3b	LINE/CR1	(488)	4744	4523	689258
19	23.4	6.7	2.1	chr11	77473720	77473808	(57612814)	+	G-rich	Low_complexity	1	95	(0)	689966
35	9.4	0.0	8.5	chr11	77474131	77474212	(57612410)	+	(CCCCTC)n	Simple_repeat	1	82	(0)	689967
15	13.7	3.1	0.0	chr11	77474212	77474243	(57612379)	+	(CGG)n	Simple_repeat	1	33	(0)	689968
12	18.1	4.2	1.3	chr11	77820097	77820135	(57266487)	+	GA-rich	Low_complexity	1	40	(0)	690658
12	14.8	0.0	5.9	chr11	78560973	78561006	(56525616)	+	G-rich	Low_complexity	1	34	(0)	692260
535	29.6	0.8	12.4	chr11	78966064	78966337	(56120285)	+	MIR	SINE/MIR	18	259	(3)	692993
1791	23.8	12.4	6.4	chr11	79453330	79454689	(55631933)	C	HAL1	LINE/L1	(1)	2506	1061	693977
519	25.8	32.7	1.0	chr11	79485835	79486124	(55600498)	+	LTR78	LTR/ERV1	832	1216	(88)	694046
20	22.9	4.5	1.4	chr11	82930948	82931014	(52155608)	+	(TCCTC)n	Simple_repeat	1	70	(0)	699716
381	30.8	11.8	6.7	chr11	82931035	82931274	(52155348)	C	MIRb	SINE/MIR	(8)	260	7	699717
24	24.2	1.9	5.7	chr11	85811241	85811343	(49275279)	+	(CGCCC)n	Simple_repeat	1	105	(0)	704418
13	13.2	0.0	0.0	chr11	85811430	85811454	(49275168)	+	(TTA)n	Simple_repeat	1	25	(0)	704419
15	7.5	11.4	2.0	chr11	86069146	86069189	(49017433)	+	(CCCTTCT)n	Simple_repeat	1	49	(0)	704858
12	24.0	4.6	4.4	chr11	86069190	86069210	(49017412)	+	(CCCT)n	Simple_repeat	1	68	(0)	704859
16	13.2	0.0	0.0	chr11	86245010	86245034	(48841588)	+	(CG)n	Simple_repeat	1	25	(0)	705223
15	26.8	3.3	1.6	chr11	86245077	86245136	(48841486)	+	(CGG)n	Simple_repeat	1	62	(0)	705224
18	32.3	4.7	3.8	chr11	86934364	86934490	(48152132)	+	(TC)n	Simple_repeat	1	133	(0)	706342
388	34.3	14.7	4.5	chr11	88103278	88103677	(46982945)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	708066
1392	23.8	11.5	7.3	chr11	88103679	88104345	(46982277)	+	LTR41C	LTR/ERVL	1	698	(3)	708067
13	8.1	3.9	0.0	chr11	92226891	92226916	(42859706)	+	(CCTCT)n	Simple_repeat	1	27	(0)	713866
41	0.0	0.0	0.0	chr11	92309385	92309419	(42777203)	+	(CA)n	Simple_repeat	1	35	(0)	713968
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
12	0.0	0.0	5.0	chr11	94740502	94740521	(40346101)	+	(CGC)n	Simple_repeat	1	20	(0)	717600
16	23.0	3.9	0.0	chr11	95089758	95089808	(39996814)	+	(CCCGC)n	Simple_repeat	1	53	(0)	718109
205	23.9	4.2	0.0	chr11	95231754	95231799	(39854823)	C	AmnSINE1	SINE/5S-Deu-L2	(16)	559	512	718310
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
13	26.6	2.9	5.6	chr11	102846197	102846265	(32240357)	+	GA-rich	Low_complexity	1	71	(0)	728541
14	17.9	0.0	4.8	chr11	103109529	103109570	(31977052)	+	(CTTCCCC)n	Simple_repeat	1	42	(0)	729012
1952	14.7	12.2	1.8	chr11	103585771	103586152	(31500470)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	729649
786	24.5	9.6	0.0	chr11	103586168	103586383	(31500239)	C	MIR	SINE/MIR	(0)	262	24	729650
370	25.6	7.1	2.0	chr11	107590088	107590254	(27496368)	C	MIR	SINE/MIR	(78)	190	5	735146
126	0.0	0.0	0.0	chr11	107590333	107590439	(27496183)	+	(TC)n	Simple_repeat	1	107	(0)	735147
1487	18.0	3.4	0.0	chr11	107847949	107848232	(27238390)	+	L1MB3	LINE/L1	5890	6183	(0)	735641
12	25.1	4.0	1.9	chr11	107848264	107848313	(27238309)	+	GA-rich	Low_complexity	1	52	(0)	735642
1692	19.4	5.3	0.6	chr11	107848385	107848710	(27237912)	+	MLT1A0	LTR/ERVL-MaLR	1	342	(23)	735643
45	25.0	0.7	2.9	chr11	107856800	107856935	(27229687)	+	G-rich	Low_complexity	1	137	(0)	735674
244	15.0	0.0	0.0	chr11	107856936	107856975	(27229647)	C	MIR	SINE/MIR	(133)	129	90	735675
21	6.8	0.0	0.0	chr11	107857022	107857052	(27229570)	+	(AGGA)n	Simple_repeat	1	31	(0)	735676
249	14.6	9.4	0.0	chr11	107857061	107857108	(27229514)	C	MIR1_Amn	SINE/MIR	(94)	136	84	735677
23	11.5	0.0	0.0	chr11	107857109	107857147	(27229475)	+	(AAGG)n	Simple_repeat	1	39	(0)	735678
238	15.4	0.0	0.0	chr11	107857148	107857186	(27229436)	C	MIR	SINE/MIR	(134)	128	90	735679
66	23.1	0.5	4.1	chr11	107857189	107857381	(27229241)	+	GA-rich	Low_complexity	1	194	(0)	735680
12	10.7	2.9	5.7	chr11	107859162	107859195	(27227427)	+	(GTGA)n	Simple_repeat	1	35	(0)	735684
14	7.8	0.0	6.5	chr11	107859229	107859259	(27227363)	+	(CCCT)n	Simple_repeat	1	31	(0)	735685
2406	8.2	1.0	0.0	chr11	107859304	107859608	(27227014)	+	AluSx1	SINE/Alu	1	308	(4)	735686
186	34.4	6.6	3.0	chr11	108885920	108886051	(26200571)	C	L2c	LINE/L2	(206)	3181	3045	737540
413	27.6	18.1	1.5	chr11	108886204	108886405	(26200217)	C	MIRb	SINE/MIR	(7)	261	19	737541
183	20.7	6.8	12.8	chr11	112958732	112958825	(22127797)	C	L3	LINE/CR1	(452)	3647	3560	743904
208	14.9	11.9	0.0	chr11	112969297	112969359	(22117263)	C	MIRc	SINE/MIR	(136)	132	47	743919
399	24.8	5.4	0.0	chr11	112969546	112969650	(22116972)	+	MIRb	SINE/MIR	102	212	(56)	743920
936	25.6	7.5	3.3	chr11	113691274	113691632	(21394990)	+	MER113	DNA/hAT-Charlie	1	375	(146)	744999
562	29.9	5.8	10.7	chr11	114044067	114044486	(21042136)	C	L2a	LINE/L2	(1)	3425	3028	745661
224	28.1	2.2	10.1	chr11	114192990	114193088	(20893534)	C	L2c	LINE/L2	(14)	3373	3283	745880
22	3.8	0.0	0.0	chr11	114257664	114257690	(20828932)	+	(AC)n	Simple_repeat	1	27	(0)	745983
17	12.4	2.9	0.0	chr11	114257692	114257726	(20828896)	+	(CCTCC)n	Simple_repeat	1	36	(0)	745984
17	11.4	2.4	4.7	chr11	115581041	115581082	(19505540)	+	(CCTCTC)n	Simple_repeat	1	43	(0)	747866
442	29.5	8.3	2.9	chr11	115581093	115581263	(19505359)	+	MIRc	SINE/MIR	88	268	(0)	747867
181	33.7	6.5	6.5	chr11	115653807	115653914	(19432708)	+	MIRc	SINE/MIR	11	118	(150)	748014
216	20.4	0.0	0.0	chr11	115653929	115653972	(19432650)	+	MIRc	SINE/MIR	207	250	(18)	748015
365	31.5	4.4	0.0	chr11	115695629	115695758	(19390864)	C	L3b	LINE/CR1	(187)	5045	4910	748097
19	5.7	4.9	4.7	chr11	115695900	115695940	(19390682)	+	(CTCCT)n	Simple_repeat	1	43	(0)	748098
333	25.6	3.3	2.5	chr11	115919590	115919709	(19166913)	+	LTR79	LTR/ERVL	176	296	(231)	748423
429	26.2	6.5	2.8	chr11	115919728	115919904	(19166718)	+	LTR79	LTR/ERVL	338	521	(6)	748423
204	26.8	11.2	5.9	chr11	116830039	116830173	(18256449)	C	MIR3	SINE/MIR	(19)	189	47	750025
12	13.6	2.8	5.4	chr11	117179036	117179071	(17907551)	+	(CCCT)n	Simple_repeat	1	37	(0)	750694
12	35.6	0.0	0.0	chr11	117314902	117314958	(17771664)	+	G-rich	Low_complexity	1	57	(0)	750936
12	3.8	6.5	6.1	chr11	117314938	117314968	(17771654)	+	GA-rich	Low_complexity	1	33	(0)	750937
291	33.7	2.8	10.9	chr11	117316474	117316752	(17769870)	C	L2b	LINE/L2	(26)	3349	3062	750939
15	11.3	4.1	3.9	chr11	118152814	118152857	(16933765)	+	G-rich	Low_complexity	1	44	(0)	752413
19	26.2	2.1	5.2	chr11	118152876	118152946	(16933676)	+	(GGAGCA)n	Simple_repeat	1	96	(0)	752414
19	18.3	1.9	3.7	chr11	118152901	118152953	(16933669)	+	GA-rich	Low_complexity	1	54	(0)	752415
261	27.3	17.0	0.8	chr11	118171863	118171995	(16914627)	C	MIR3	SINE/MIR	(20)	188	30	752439
23	16.4	1.9	3.8	chr11	118176619	118176670	(16909952)	+	GA-rich	Low_complexity	1	53	(0)	752450
14	25.5	0.0	6.3	chr11	118437512	118437590	(16649032)	+	(CACCC)n	Simple_repeat	1	73	(0)	752907
19	18.9	7.7	4.1	chr11	118621251	118621341	(16465281)	+	(TCCTC)n	Simple_repeat	1	98	(0)	753251
12	9.8	0.0	11.9	chr11	118634672	118634713	(16451909)	+	(CCCTCT)n	Simple_repeat	1	42	(0)	753263
13	7.0	6.2	2.9	chr11	118634880	118634911	(16451711)	+	(CTCGCC)n	Simple_repeat	1	34	(0)	753264
12	3.9	3.1	9.1	chr11	118909223	118909254	(16177368)	+	(GGCA)n	Simple_repeat	1	33	(0)	753850
667	31.8	5.5	0.4	chr11	118917308	118917550	(16169072)	C	MIR	SINE/MIR	(4)	258	3	753859
24	19.3	0.0	0.0	chr11	118921242	118921288	(16165334)	+	(AC)n	Simple_repeat	1	47	(0)	753863
13	22.8	2.4	0.0	chr11	118922150	118922190	(16164432)	+	GA-rich	Low_complexity	1	42	(0)	753864
14	17.6	0.0	6.7	chr11	118929552	118929596	(16157026)	+	(TCCCCC)n	Simple_repeat	1	45	(0)	753878
17	21.1	0.0	2.2	chr11	119089488	119089533	(15997089)	+	G-rich	Low_complexity	1	46	(0)	754238
358	26.9	5.1	1.5	chr11	119352882	119353013	(15733609)	C	MIR3	SINE/MIR	(6)	202	66	754735
13	16.0	0.0	3.2	chr11	119364270	119364300	(15722322)	+	(GCCCC)n	Simple_repeat	1	31	(0)	754747
404	33.3	12.6	0.0	chr11	119374440	119374598	(15712024)	C	MIR3	SINE/MIR	(16)	192	11	754758
18	18.5	4.1	0.0	chr11	119664663	119664711	(15421911)	+	G-rich	Low_complexity	1	51	(0)	755272
11	6.1	14.7	0.0	chr11	119797285	119797318	(15289304)	+	(TGCACA)n	Simple_repeat	1	39	(0)	755483
56	25.3	2.7	4.4	chr11	120182721	120182939	(14903683)	+	GA-rich	Low_complexity	1	225	(0)	756096
1123	15.9	2.4	5.0	chr11	120306411	120306628	(14779994)	C	MER20	DNA/hAT-Charlie	(2)	217	6	756324
234	27.9	10.3	4.7	chr11	120306875	120307002	(14779620)	C	L3	LINE/CR1	(12)	4087	3952	756325
18	9.2	5.7	0.0	chr11	120953031	120953065	(14133557)	+	(GGA)n	Simple_repeat	1	37	(0)	757450
11	17.3	7.7	0.0	chr11	121024161	121024199	(14062423)	+	G-rich	Low_complexity	1	42	(0)	757568
24	25.7	4.4	3.4	chr11	122882875	122882987	(12203635)	+	(GGC)n	Simple_repeat	1	118	(0)	760399
405	14.3	1.3	3.8	chr11	123058077	123058156	(12028466)	C	U14	snRNA	(1)	86	9	760731
17	8.9	0.0	0.0	chr11	123058227	123058250	(12028372)	+	(A)n	Simple_repeat	1	24	(0)	760732
26	21.8	5.6	0.0	chr11	123358226	123358296	(11728326)	+	GA-rich	Low_complexity	1	75	(0)	761388
18	17.5	3.6	3.5	chr11	123431170	123431224	(11655398)	+	(CGTCC)n	Simple_repeat	1	57	(0)	761531
24	14.1	0.0	6.5	chr11	123477360	123477421	(11609201)	+	A-rich	Low_complexity	1	62	(0)	761641
80	12.9	1.1	6.7	chr11	123477582	123477769	(11608853)	+	(CCTTC)n	Simple_repeat	1	177	(0)	761642
2091	9.3	0.7	5.9	chr11	123477770	123478091	(11608531)	C	AluSx1	SINE/Alu	(7)	305	1	761643
31	20.8	0.0	0.0	chr11	123741468	123741535	(11345087)	+	(CCCGG)n	Simple_repeat	1	68	(0)	762084
24	10.0	2.2	2.2	chr11	125164817	125164861	(9921761)	+	(GGC)n	Simple_repeat	1	46	(0)	764077
23	26.4	2.9	3.8	chr11	125164926	125165028	(9921594)	+	GA-rich	Low_complexity	1	106	(0)	764078
23	16.5	5.5	3.9	chr11	125165104	125165176	(9921446)	+	(GCC)n	Simple_repeat	1	77	(0)	764079
15	23.5	1.7	4.9	chr11	125495120	125495179	(9591443)	+	(CTC)n	Simple_repeat	1	61	(0)	764609
16	5.3	0.0	0.0	chr11	125517424	125517443	(9569179)	+	(A)n	Simple_repeat	1	20	(0)	764661
1941	13.2	0.0	0.0	chr11	125568869	125569134	(9517488)	C	AluSg	SINE/Alu	(26)	284	19	764749
12	10.6	2.9	5.7	chr11	125626315	125626348	(9460274)	+	(TGGAAT)n	Simple_repeat	1	35	(0)	764863
1142	17.7	2.1	2.9	chr11	126061939	126062182	(9024440)	C	UCON89	DNA/hAT?	(0)	242	1	765433
15	21.2	0.0	4.3	chr11	126104728	126104774	(8981848)	+	(CTCTCC)n	Simple_repeat	1	47	(0)	765520
36	4.9	0.0	0.0	chr11	128521732	128521773	(6564849)	+	(TCC)n	Simple_repeat	1	42	(0)	769016
61	0.0	0.0	0.0	chr11	128693942	128693993	(6392629)	+	(GA)n	Simple_repeat	1	52	(0)	769253
14	17.5	0.0	0.0	chr11	128891282	128891313	(6195309)	+	(CCCCG)n	Simple_repeat	1	32	(0)	769533
40	5.3	4.9	0.0	chr11	128891365	128891397	(6195225)	+	(GA)n	Simple_repeat	1	34	(0)	769534
53	0.0	0.0	0.0	chr11	128891398	128891442	(6195180)	+	(AC)n	Simple_repeat	1	45	(0)	769535
40	5.3	4.9	0.0	chr11	128891443	128891476	(6195146)	+	(GA)n	Simple_repeat	2	35	(0)	769536
313	31.9	0.0	0.0	chr11	130181696	130181786	(4904836)	+	MIR3	SINE/MIR	77	167	(41)	771488
21	21.2	1.8	1.7	chr11	130314431	130314494	(4772128)	+	(GGC)n	Simple_repeat	1	64	(0)	771693
23	15.4	2.5	4.9	chr11	130314765	130314825	(4771797)	+	G-rich	Low_complexity	1	59	(0)	771694
19	14.1	0.0	4.7	chr11	130314827	130314869	(4771753)	+	(GCC)n	Simple_repeat	1	43	(0)	771695
16	8.9	0.0	9.3	chr11	130314958	130315000	(4771622)	+	G-rich	Low_complexity	1	43	(0)	771696
15	22.7	0.0	6.8	chr11	131997926	131997984	(3088638)	+	(CCTC)n	Simple_repeat	1	59	(0)	774102
49	4.0	0.0	0.0	chr11	133948050	133948100	(1138522)	+	(TG)n	Simple_repeat	1	51	(0)	776556
17	21.8	1.5	6.0	chr11	133948162	133948230	(1138392)	+	(TCTG)n	Simple_repeat	1	65	(0)	776557
41	0.0	0.0	0.0	chr11	134411671	134411705	(674917)	+	(CA)n	Simple_repeat	1	35	(0)	777184
291	37.1	3.4	0.7	chr11	134637554	134637697	(448925)	+	ERVL-E-int	LTR/ERVL	2284	2431	(3236)	777481
740	22.5	4.4	0.6	chr11	134757873	134758046	(328576)	C	MER5A	DNA/hAT-Charlie	(7)	182	2	777617
279	30.2	5.5	3.5	chr11	134758204	134758347	(328275)	+	MIRc	SINE/MIR	107	253	(15)	777618
18	15.5	3.6	2.3	chr12	199140	199184	(133076125)	+	G-rich	Low_complexity	1	45	(0)	778374
349	16.5	2.0	9.3	chr12	199228	199334	(133075975)	C	L1MA5	LINE/L1	(0)	6300	6202	778375
1438	14.6	4.0	5.1	chr12	203038	203337	(133071972)	C	AluSx1	SINE/Alu	(0)	312	33	778380
13	18.9	0.0	0.0	chr12	204665	204694	(133070615)	+	GA-rich	Low_complexity	1	30	(0)	778381
24	17.9	3.0	2.9	chr12	214418	214486	(133060823)	+	(CCCTTCC)n	Simple_repeat	1	69	(0)	778394
19	10.0	0.0	2.9	chr12	262939	262973	(133012336)	+	(CCTCC)n	Simple_repeat	1	35	(0)	778462
21	16.4	0.0	0.0	chr12	389549	389590	(132885719)	+	(CGAGG)n	Simple_repeat	1	42	(0)	778653
25	11.7	0.0	0.0	chr12	541831	541867	(132733442)	+	(C)n	Simple_repeat	1	37	(0)	778940
525	21.2	3.6	0.8	chr12	546869	547001	(132728308)	C	MIR3	SINE/MIR	(52)	156	20	778943
1310	22.2	3.5	1.3	chr12	547183	547492	(132727817)	+	L1MA4A	LINE/L1	5985	6301	(2)	778944
1617	19.4	2.6	5.3	chr12	804971	805363	(132469946)	C	L1MB3	LINE/L1	(364)	5816	5435	779510
2033	15.4	1.6	3.8	chr12	983971	984200	(132291109)	C	L1MB3	LINE/L1	(1)	6182	5950	779847
2169	10.7	0.3	1.3	chr12	984201	984499	(132290810)	C	AluSq	SINE/Alu	(17)	296	1	779848
16	17.7	1.7	6.8	chr12	991627	991684	(132283625)	+	G-rich	Low_complexity	1	59	(0)	779869
29	0.0	0.0	0.0	chr12	1594157	1594183	(131681126)	+	(GCC)n	Simple_repeat	1	27	(0)	780919
2174	12.2	0.3	0.0	chr12	1625652	1625962	(131649347)	C	AluSx1	SINE/Alu	(0)	312	1	780976
594	27.2	11.3	1.2	chr12	1804562	1804814	(131470495)	+	MLT1J	LTR/ERVL-MaLR	28	309	(203)	781294
232	18.6	11.4	0.0	chr12	1804831	1804900	(131470409)	+	MLT1J	LTR/ERVL-MaLR	392	470	(42)	781294
31	0.0	0.0	0.0	chr12	1924796	1924829	(131350480)	+	(GT)n	Simple_repeat	1	34	(0)	781437
50	2.2	0.0	0.0	chr12	1924830	1924876	(131350433)	+	(GA)n	Simple_repeat	1	47	(0)	781438
210	19.0	0.7	0.7	chr12	1929717	1930129	(131345180)	+	GA-rich	Low_complexity	1	416	(0)	781446
465	32.0	7.4	9.8	chr12	1964277	1965253	(131310056)	C	L1M5	LINE/L1	(813)	5333	4383	781499
19	35.8	2.1	1.0	chr12	1972782	1972876	(131302433)	+	GA-rich	Low_complexity	1	97	(0)	781504
14	12.7	0.0	7.5	chr12	2052290	2052329	(131222980)	+	(CTCCC)n	Simple_repeat	1	40	(0)	781623
19	4.5	0.0	0.0	chr12	2794792	2794814	(130480495)	+	(A)n	Simple_repeat	1	23	(0)	782669
21	26.1	2.5	2.4	chr12	2795036	2795116	(130480193)	+	(CCGCGC)n	Simple_repeat	1	83	(0)	782670
347	27.9	6.7	7.3	chr12	2877738	2877898	(130397411)	C	L2b	LINE/L2	(0)	3387	3225	782824
30	5.5	0.0	0.0	chr12	3041668	3041705	(130233604)	+	(CCTCCCTG)n	Simple_repeat	1	38	(0)	783186
16	9.0	2.6	5.0	chr12	3077161	3077199	(130198110)	+	(CCCGTGC)n	Simple_repeat	1	40	(0)	783268
12	20.6	0.0	6.7	chr12	3077200	3077205	(130198104)	+	(CCCGTCC)n	Simple_repeat	1	45	(0)	783269
42	21.9	1.6	3.2	chr12	3077254	3077376	(130197933)	+	(CGCCC)n	Simple_repeat	1	125	(0)	783270
251	31.0	0.0	8.4	chr12	3534488	3534582	(129740727)	+	MIR1_Amn	SINE/MIR	57	143	(87)	783989
1402	27.0	4.3	1.4	chr12	3572868	3573726	(129701583)	C	L1MEf	LINE/L1	(4850)	2187	1138	784040
14	18.3	2.0	6.0	chr12	3605518	3605566	(129669743)	+	GA-rich	Low_complexity	1	50	(0)	784105
12	16.4	5.9	0.0	chr12	3873171	3873204	(129402105)	+	(CCCCG)n	Simple_repeat	1	36	(0)	784521
19	13.8	6.0	1.9	chr12	4269331	4269380	(129005929)	+	(CCG)n	Simple_repeat	1	53	(0)	785266
17	10.0	8.9	2.0	chr12	4275448	4275492	(128999817)	+	(CTC)n	Simple_repeat	1	49	(0)	785271
1497	14.4	3.1	2.5	chr12	4421291	4421574	(128853735)	C	L1MA5A	LINE/L1	(9)	6288	6003	785513
430	29.0	7.0	6.2	chr12	5648607	5648782	(127626527)	+	MIRc	SINE/MIR	62	242	(20)	787332
14	16.4	2.9	0.0	chr12	5648858	5648891	(127626418)	+	(CCTCT)n	Simple_repeat	1	35	(0)	787333
208	36.0	8.3	1.0	chr12	5649012	5649112	(127626197)	C	L2b	LINE/L2	(31)	3344	3236	787334
14	18.8	0.0	2.6	chr12	5945400	5945437	(127329872)	+	G-rich	Low_complexity	1	38	(0)	787771
725	23.3	20.8	0.8	chr12	6324857	6325090	(126950219)	+	MamRep38	DNA/hAT	3	295	(0)	788481
19	21.8	1.6	3.2	chr12	6325131	6325192	(126950117)	+	(CCTCCC)n	Simple_repeat	1	63	(0)	788482
610	27.0	8.1	0.0	chr12	6325246	6325449	(126949860)	+	MIRc	SINE/MIR	10	231	(37)	788483
19	27.0	4.0	3.9	chr12	6342045	6342144	(126933165)	+	GA-rich	Low_complexity	1	104	(0)	788509
12	23.0	0.0	4.5	chr12	6373931	6373974	(126901335)	+	(CTCGC)n	Simple_repeat	1	44	(0)	788584
18	18.1	0.0	4.2	chr12	6374078	6374125	(126901184)	+	GA-rich	Low_complexity	1	48	(0)	788585
12	10.1	9.4	0.0	chr12	6552184	6552215	(126723094)	+	(CCTT)n	Simple_repeat	1	35	(0)	788932
11	24.1	0.0	9.2	chr12	6552336	6552400	(126722909)	+	(CCCAGCC)n	Simple_repeat	1	65	(0)	788933
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
15	19.6	5.1	2.0	chr12	6764579	6764639	(126510670)	+	GA-rich	Low_complexity	1	62	(0)	789348
13	19.6	0.0	0.0	chr12	6769610	6769639	(126505670)	+	GA-rich	Low_complexity	1	30	(0)	789352
182	13.9	2.7	0.0	chr12	6769683	6769718	(126505591)	C	OldhAT1	DNA/hAT-Ac	(1310)	1538	1502	789353
34	19.1	1.3	1.2	chr12	6821734	6821812	(126453497)	+	G-rich	Low_complexity	1	80	(0)	789474
15	33.6	2.5	1.2	chr12	6822131	6822211	(126453098)	+	(TCTC)n	Simple_repeat	1	83	(0)	789475
30	30.9	3.5	0.0	chr12	6828284	6828399	(126446910)	+	(TCTC)n	Simple_repeat	1	120	(0)	789481
13	16.3	0.0	5.3	chr12	6852108	6852145	(126423164)	+	GA-rich	Low_complexity	1	38	(0)	789515
13	19.6	0.0	0.0	chr12	6852831	6852860	(126422449)	+	G-rich	Low_complexity	1	30	(0)	789516
13	27.3	0.0	0.0	chr12	6905685	6905725	(126369584)	+	GA-rich	Low_complexity	1	41	(0)	789624
13	28.0	0.0	3.6	chr12	6914395	6914449	(126360860)	+	(CCCCCTC)n	Simple_repeat	1	55	(0)	789639
32	23.2	1.0	3.1	chr12	6914534	6914629	(126360680)	+	(CGC)n	Simple_repeat	1	97	(0)	789640
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
19	7.2	0.0	0.0	chr12	6938123	6938152	(126337157)	+	(CTGCG)n	Simple_repeat	1	30	(0)	789669
14	14.5	5.0	2.4	chr12	7109056	7109095	(126166214)	+	(CTTCCT)n	Simple_repeat	1	42	(0)	789964
19	15.3	0.0	6.1	chr12	8033623	8033671	(125241638)	+	(CCT)n	Simple_repeat	1	49	(0)	791669
474	24.2	8.9	11.4	chr12	8609247	8609465	(124665844)	C	L1ME1	LINE/L1	(255)	6189	5977	792562
454	25.4	0.8	5.1	chr12	8609466	8609602	(124665707)	+	SVA_E	Retroposon/SVA	188	318	(1064)	792563
745	17.7	0.8	0.8	chr12	8609490	8609613	(124665696)	C	AluJo	SINE/Alu	(188)	124	1	792564
11	30.3	2.0	0.0	chr12	8697399	8697447	(124577862)	+	(CGGCCGG)n	Simple_repeat	1	50	(0)	792745
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
246	38.5	6.0	4.2	chr12	8893004	8893263	(124382046)	C	L2b	LINE/L2	(69)	3306	3042	793091
15	20.3	2.1	2.1	chr12	8914162	8914208	(124361101)	+	(TCTCCCG)n	Simple_repeat	1	48	(0)	793138
18	8.5	0.0	0.0	chr12	9065149	9065173	(124210136)	+	(C)n	Simple_repeat	1	25	(0)	793385
5449	18.5	13.1	5.2	chr12	9065174	9066669	(124208640)	+	MER52D	LTR/ERV1	490	2121	(2)	793384
16	18.9	0.0	0.0	chr12	10213222	10213257	(123062052)	+	G-rich	Low_complexity	1	36	(0)	794932
354	24.8	1.0	1.9	chr12	10215443	10215545	(123059764)	C	MIR	SINE/MIR	(105)	157	56	794935
2412	14.5	10.9	6.5	chr12	10362660	10363332	(122911977)	+	HERVIP10FH-int	LTR/ERV1	1	782	(4320)	795149
3085	10.7	3.0	0.2	chr12	10363333	10363811	(122911498)	+	LTR15	LTR/ERV1	1	493	(0)	795150
6126	12.2	8.2	2.6	chr12	10363812	10364665	(122910644)	+	HERV15-int	LTR/ERV1	1	891	(7844)	795150
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
1299	13.6	1.8	2.7	chr12	12720612	12720831	(120554478)	C	MER20	DNA/hAT-Charlie	(1)	218	1	798631
11	24.1	0.0	0.0	chr12	12725318	12725351	(120549958)	+	(CGCCCC)n	Simple_repeat	1	34	(0)	798634
24	24.3	0.0	0.0	chr12	12725359	12725409	(120549900)	+	(TG)n	Simple_repeat	1	51	(0)	798635
592	26.9	1.5	0.0	chr12	12842353	12842486	(120432823)	+	FordPrefect_a	DNA/hAT-Tip100	1	136	(372)	798883
410	15.3	1.4	0.0	chr12	12842487	12842558	(120432751)	C	L1M5	LINE/L1	(911)	5533	5461	798884
46	20.3	2.9	0.0	chr12	12842588	12842690	(120432619)	+	(TC)n	Simple_repeat	1	106	(0)	798885
481	24.1	10.2	1.4	chr12	12842696	12842723	(120432586)	C	L1ME1	LINE/L1	(8)	6326	6289	798886
931	13.7	0.0	0.0	chr12	12842724	12842854	(120432455)	+	FLAM_C	SINE/Alu	1	131	(12)	798887
13	20.2	4.3	2.0	chr12	12892048	12892094	(120383215)	+	G-rich	Low_complexity	1	49	(0)	799009
28	13.3	5.9	1.4	chr12	12900519	12900586	(120374723)	+	(CTTCCT)n	Simple_repeat	1	72	(0)	799030
16	15.9	0.0	0.0	chr12	13098128	13098155	(120177154)	+	(T)n	Simple_repeat	1	28	(0)	799366
12	4.7	4.5	0.0	chr12	13098306	13098327	(120176982)	+	(TTTA)n	Simple_repeat	1	23	(0)	799367
777	21.4	1.7	1.1	chr12	13098876	13099050	(120176259)	+	Arthur1A	DNA/hAT-Tip100	1	176	(1)	799369
13	25.0	3.2	4.6	chr12	13255927	13256018	(120019291)	+	GA-rich	Low_complexity	1	90	(0)	799597
79	24.7	3.2	0.5	chr12	14845511	14845727	(118429582)	+	GA-rich	Low_complexity	1	224	(0)	802005
16	10.4	0.0	5.7	chr12	15882461	15882495	(117392814)	+	(CCCT)n	Simple_repeat	1	35	(0)	803443
1880	16.6	6.2	12.0	chr12	15931619	15932103	(117343206)	+	MSTB2	LTR/ERVL-MaLR	1	455	(2)	803538
21	29.4	1.4	0.0	chr12	16606525	16606595	(116668714)	+	(CCTC)n	Simple_repeat	1	72	(0)	804477
18	0.0	4.0	0.0	chr12	19130684	19130708	(114144601)	+	(AGG)n	Simple_repeat	1	26	(0)	807588
25	22.0	1.4	2.7	chr12	19439621	19439692	(113835617)	+	GA-rich	Low_complexity	1	73	(0)	808199
261	22.8	20.7	3.6	chr12	19458797	19459019	(113816290)	C	L1ME4b	LINE/L1	(32)	860	590	808234
13018	15.1	8.5	3.8	chr12	19481779	19483618	(113791691)	C	L1PB2	LINE/L1	(4878)	1985	2	808267
17	26.9	3.9	2.5	chr12	20368450	20368526	(112906783)	+	(TCCT)n	Simple_repeat	1	80	(0)	809554
15	29.1	5.1	0.0	chr12	23949700	23949731	(109325578)	+	(TC)n	Simple_repeat	1	33	(0)	814233
63	4.6	0.0	0.0	chr12	23949732	23949798	(109325511)	+	(CT)n	Simple_repeat	1	67	(0)	814234
15	29.1	5.1	0.0	chr12	23949799	23949824	(109325485)	+	(TC)n	Simple_repeat	2	29	(0)	814235
335	31.5	13.4	3.3	chr12	24930229	24930542	(108344767)	C	LTR78B	LTR/ERV1	(583)	713	328	815664
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
19	23.4	5.6	3.2	chr12	25251107	25251196	(108024113)	+	G-rich	Low_complexity	1	95	(0)	816205
1523	24.4	8.0	5.1	chr12	25583659	25584188	(107691121)	C	L2	LINE/L2	(354)	3065	2519	816698
2140	15.9	1.8	1.0	chr12	25614724	25615110	(107660199)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	816727
241	39.5	10.8	0.9	chr12	25615203	25615427	(107659882)	+	L3b	LINE/CR1	4546	4795	(437)	816728
271	29.9	10.3	3.1	chr12	26010371	26010532	(107264777)	+	MER96	DNA/hAT-Tip100	1	175	(0)	817381
561	24.1	4.8	5.4	chr12	26283138	26283304	(106992005)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	817751
797	29.1	11.7	5.4	chr12	26283305	26283436	(106991873)	+	LTR81	LTR/Gypsy	1045	1187	(2)	817750
12	8.9	4.2	0.0	chr12	26833030	26833053	(106442256)	+	(GCC)n	Simple_repeat	1	25	(0)	818545
15	8.9	7.9	2.4	chr12	26833099	26833136	(106442173)	+	(CTC)n	Simple_repeat	1	41	(0)	818546
14	18.5	2.6	2.5	chr12	30754859	30754897	(102520412)	+	(CTC)n	Simple_repeat	1	40	(0)	824129
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
7235	20.4	6.4	4.8	chr12	30844414	30844745	(102430564)	+	HUERS-P3-int	LTR/ERV1	411	805	(6613)	824277
2498	7.7	0.3	0.0	chr12	30844746	30845056	(102430253)	+	AluSp	SINE/Alu	1	312	(1)	824278
16	15.4	2.8	0.0	chr12	31362735	31362770	(101912539)	+	(TTTTG)n	Simple_repeat	1	37	(0)	825106
12	24.2	4.5	0.0	chr12	31362973	31363016	(101912293)	+	(TGCA)n	Simple_repeat	1	46	(0)	825107
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
24	11.9	1.5	7.6	chr12	31898173	31898237	(101377072)	+	G-rich	Low_complexity	1	66	(0)	826312
19	20.8	9.0	2.1	chr12	31898238	31898255	(101377054)	+	GA-rich	Low_complexity	21	97	(0)	826313
396	20.8	1.3	0.0	chr12	31898363	31898439	(101376870)	C	MER58B	DNA/hAT-Charlie	(233)	108	31	826314
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
3097	12.6	11.0	5.0	chr12	32666557	32666906	(100608403)	C	MER51A	LTR/ERV1	(245)	389	1	827888
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
3923	23.2	14.0	4.7	chr12	32697247	32697634	(100577675)	+	HAL1M8	LINE/L1	1581	2049	(942)	827959
12	12.6	0.0	3.6	chr12	32897112	32897139	(100378170)	+	(GCCCC)n	Simple_repeat	1	28	(0)	828310
247	33.7	2.1	1.0	chr12	32994068	32994163	(100281146)	C	MIRb	SINE/MIR	(5)	263	167	828489
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
2285	8.2	0.9	0.6	chr12	41534286	41534605	(91740704)	C	L1PA10	LINE/L1	(3)	6165	5845	835174
938	30.3	5.8	5.1	chr12	41534606	41534777	(91740532)	C	L1ME3E	LINE/L1	(5467)	1636	1466	835169
18	19.6	1.7	5.1	chr12	42144639	42144696	(91130613)	+	(CGC)n	Simple_repeat	1	59	(0)	836071
13	5.2	0.0	0.0	chr12	42144751	42144770	(91130539)	+	(CCG)n	Simple_repeat	1	20	(0)	836072
194	27.9	11.9	1.9	chr12	42487576	42487681	(90787628)	+	MIRc	SINE/MIR	27	144	(124)	836704
24	18.9	1.7	1.7	chr12	42587311	42587368	(90687941)	+	(TTCC)n	Simple_repeat	1	59	(0)	836898
17	0.0	0.0	0.0	chr12	42590090	42590108	(90685201)	+	(T)n	Simple_repeat	1	19	(0)	836902
2642	17.2	7.9	0.0	chr12	43763091	43763658	(89511651)	+	Charlie1a	DNA/hAT-Charlie	838	1454	(1)	838513
15	27.3	5.0	2.4	chr12	43763674	43763753	(89511556)	+	(CTTCTC)n	Simple_repeat	1	84	(0)	838514
90	19.0	0.0	1.1	chr12	44972803	44972980	(88302329)	+	(TCCT)n	Simple_repeat	1	178	(0)	840131
293	40.5	2.3	1.7	chr12	45615361	45615536	(87659773)	C	L3b	LINE/CR1	(387)	4845	4669	841082
32	9.0	3.5	8.0	chr12	45729578	45729664	(87545645)	+	(TCC)n	Simple_repeat	1	83	(0)	841280
86	8.4	9.2	0.0	chr12	46125342	46125505	(87149804)	+	GA-rich	Low_complexity	1	179	(0)	841856
406	29.7	12.0	3.5	chr12	46266442	46266766	(87008543)	+	L2a	LINE/L2	3044	3376	(11)	842051
35	22.2	7.7	0.0	chr12	46383575	46383704	(86891605)	+	GA-rich	Low_complexity	1	140	(0)	842184
15	13.4	5.9	0.0	chr12	46460130	46460164	(86815145)	+	(CCT)n	Simple_repeat	1	37	(0)	842313
869	28.0	15.9	2.5	chr12	47768277	47768548	(85506761)	C	L2b	LINE/L2	(607)	2812	2520	844164
433	28.3	15.8	0.0	chr12	47770497	47770634	(85504675)	C	MIR	SINE/MIR	(8)	254	91	844172
325	32.8	4.1	1.1	chr12	47770756	47770937	(85504372)	+	L2c	LINE/L2	2887	3082	(337)	844173
369	33.7	6.4	0.6	chr12	47779257	47779432	(85495877)	+	MIRb	SINE/MIR	60	246	(22)	844189
1532	9.9	11.6	1.1	chr12	47779698	47779982	(85495327)	+	MER1B	DNA/hAT-Charlie	17	335	(4)	844190
12	16.1	0.0	7.5	chr12	47816681	47816720	(85458589)	+	(CCCTGCC)n	Simple_repeat	1	40	(0)	844243
15	7.9	7.4	0.0	chr12	47820442	47820468	(85454841)	+	(AC)n	Simple_repeat	1	29	(0)	844248
14	26.8	1.3	6.4	chr12	47820670	47820746	(85454563)	+	(CCCTCC)n	Simple_repeat	1	78	(0)	844249
37	8.0	0.0	0.0	chr12	47904085	47904137	(85371172)	+	(GAG)n	Simple_repeat	1	53	(0)	844399
20	22.6	0.0	0.0	chr12	48119197	48119243	(85156066)	+	GA-rich	Low_complexity	1	47	(0)	844727
37	26.2	2.4	5.2	chr12	48788896	48789065	(84486244)	+	(GCCC)n	Simple_repeat	1	174	(0)	845785
13	8.5	4.0	0.0	chr12	48813744	48813768	(84461541)	+	(CAAAA)n	Simple_repeat	1	26	(0)	845853
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
11	21.8	2.2	4.3	chr12	48890929	48890974	(84384335)	+	G-rich	Low_complexity	1	47	(0)	846004
13	14.6	0.0	5.9	chr12	48956305	48956338	(84318971)	+	(ACC)n	Simple_repeat	1	34	(0)	846156
21	16.4	0.0	0.0	chr12	48971629	48971669	(84303640)	+	G-rich	Low_complexity	1	41	(0)	846188
23	0.0	0.0	0.0	chr12	48971839	48971863	(84303446)	+	(GC)n	Simple_repeat	1	25	(0)	846189
43	0.0	0.0	0.0	chr12	48971864	48971900	(84303409)	+	(CA)n	Simple_repeat	1	37	(0)	846190
15	5.3	4.2	10.0	chr12	49060125	49060172	(84215137)	+	(CGGCCGG)n	Simple_repeat	1	50	(0)	846305
12	20.1	2.9	0.0	chr12	49070012	49070045	(84205264)	+	(GCCGC)n	Simple_repeat	1	35	(0)	846320
12	21.1	0.0	0.0	chr12	49089740	49089768	(84185541)	+	(CTCC)n	Simple_repeat	1	29	(0)	846374
90	2.3	0.0	0.0	chr12	49264788	49264876	(84010433)	+	(CCCTTCCTC)n	Simple_repeat	1	89	(0)	846829
14	16.4	0.0	5.3	chr12	49337136	49337173	(83938136)	+	(TCCC)n	Simple_repeat	1	38	(0)	846988
15	29.2	1.6	1.6	chr12	49342065	49342125	(83933184)	+	(CTCC)n	Simple_repeat	1	62	(0)	846998
13	11.2	0.0	6.1	chr12	49346358	49346390	(83928919)	+	(CTCCCC)n	Simple_repeat	1	33	(0)	847003
14	24.2	5.1	3.7	chr12	49346391	49346434	(83928875)	+	(TCTCCCC)n	Simple_repeat	2	82	(0)	847004
22	21.4	1.3	6.2	chr12	49367401	49367479	(83907830)	+	(GGC)n	Simple_repeat	1	80	(0)	847046
267	30.6	3.2	6.2	chr12	49536535	49536663	(83738646)	+	MIR3	SINE/MIR	11	135	(73)	847398
56	16.9	3.2	4.9	chr12	49536664	49536821	(83738488)	+	(TCTCCT)n	Simple_repeat	1	163	(0)	847399
15	8.3	7.1	4.4	chr12	49673750	49673791	(83601518)	+	(CCAGC)n	Simple_repeat	1	45	(0)	847574
19	3.8	0.0	0.0	chr12	49702543	49702569	(83572740)	+	(AAAAC)n	Simple_repeat	1	27	(0)	847639
17	16.3	6.8	3.2	chr12	49707425	49707483	(83567826)	+	(CCGCG)n	Simple_repeat	1	63	(0)	847645
13	29.6	0.0	3.5	chr12	49707465	49707521	(83567788)	+	(CCCT)n	Simple_repeat	1	57	(0)	847646
538	22.0	6.5	1.9	chr12	49826594	49826755	(83448554)	C	MIR3	SINE/MIR	(2)	206	37	847876
16	16.5	0.0	0.0	chr12	49828079	49828105	(83447204)	+	G-rich	Low_complexity	1	27	(0)	847878
13	4.7	4.5	0.0	chr12	49868228	49868249	(83407060)	+	(GGA)n	Simple_repeat	1	23	(0)	847961
299	32.3	0.0	1.0	chr12	49910036	49910135	(83365174)	C	MIR3	SINE/MIR	(60)	148	50	848025
276	7.0	2.3	0.0	chr12	49960179	49960221	(83315088)	C	MIRb	SINE/MIR	(16)	252	209	848153
13	13.9	6.1	0.0	chr12	49968010	49968042	(83307267)	+	(CTCCCT)n	Simple_repeat	1	35	(0)	848161
15	13.7	0.0	2.9	chr12	50057586	50057619	(83217690)	+	(CCCCT)n	Simple_repeat	1	34	(0)	848347
18	17.1	2.9	7.1	chr12	50057686	50057753	(83217556)	+	(GAGC)n	Simple_repeat	1	70	(0)	848348
100	16.8	3.6	1.7	chr12	50135086	50135308	(83140001)	+	GA-rich	Low_complexity	1	231	(0)	848486
49	0.0	0.0	0.0	chr12	50135309	50135350	(83139959)	+	(GT)n	Simple_repeat	1	42	(0)	848487
1136	22.5	7.9	4.2	chr12	50247163	50247599	(83027710)	+	MLT1G1	LTR/ERVL-MaLR	10	513	(66)	848753
675	24.9	15.7	1.7	chr12	50705416	50705656	(82569653)	C	MLT1J	LTR/ERVL-MaLR	(210)	302	22	849827
2195	11.4	0.7	0.0	chr12	50761982	50762280	(82513029)	C	AluSx	SINE/Alu	(11)	301	1	849953
2409	12.8	17.2	0.2	chr12	50928265	50928680	(82346629)	C	MER61D	LTR/ERV1	(0)	501	1	850251
499	30.2	8.5	2.9	chr12	50928681	50928930	(82346379)	+	L2	LINE/L2	2252	2509	(910)	850250
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
14	18.3	7.5	4.2	chr12	51218118	51218184	(82057125)	+	G-rich	Low_complexity	1	72	(0)	850863
41	0.0	0.0	0.0	chr12	51246605	51246639	(82028670)	+	(TG)n	Simple_repeat	1	35	(0)	850926
2240	11.4	0.0	1.3	chr12	51835803	51836109	(81439200)	C	AluSq2	SINE/Alu	(9)	304	2	851980
17	11.0	4.7	4.4	chr12	51836244	51836286	(81439023)	+	GA-rich	Low_complexity	1	45	(0)	851981
30	14.1	0.0	0.0	chr12	51941585	51941632	(81333677)	+	(CA)n	Simple_repeat	1	48	(0)	852187
197	36.6	7.7	4.0	chr12	52020547	52020745	(81254564)	+	L3b	LINE/CR1	4903	5109	(123)	852313
14	12.7	0.0	0.0	chr12	52020746	52020771	(81254538)	+	(GGCT)n	Simple_repeat	1	26	(0)	852314
2008	15.4	0.7	0.0	chr12	52029408	52029699	(81245610)	+	AluJb	SINE/Alu	1	294	(18)	852335
23	11.2	0.0	0.0	chr12	52152351	52152389	(81122920)	+	(GTCCC)n	Simple_repeat	1	39	(0)	852523
400	26.1	15.4	2.8	chr12	52171921	52172101	(81103208)	C	MIRb	SINE/MIR	(19)	249	42	852564
259	33.3	5.1	0.9	chr12	52818302	52818413	(80456896)	+	L3b	LINE/CR1	4986	5102	(130)	853450
1336	16.7	0.0	3.6	chr12	52878204	52878424	(80396885)	+	AluJb	SINE/Alu	84	296	(16)	853564
12	12.2	3.7	0.0	chr12	52907323	52907349	(80367960)	+	G-rich	Low_complexity	1	28	(0)	853633
1911	11.5	7.3	0.4	chr12	52927798	52928075	(80347234)	+	AluSq2	SINE/Alu	2	300	(13)	853679
2293	6.6	2.0	0.3	chr12	52948488	52948789	(80326520)	C	AluSc	SINE/Alu	(2)	307	1	853734
13	18.3	2.6	2.5	chr12	52953205	52953243	(80322066)	+	(GAGGACA)n	Simple_repeat	1	40	(0)	853738
20	17.8	5.9	5.6	chr12	53047081	53047165	(80228144)	+	GA-rich	Low_complexity	1	90	(0)	853986
238	29.2	0.0	4.0	chr12	53051089	53051163	(80224146)	C	L3	LINE/CR1	(7)	4092	4021	853988
21	22.6	5.4	1.3	chr12	53052753	53052826	(80222483)	+	GA-rich	Low_complexity	1	78	(0)	853989
2236	8.4	0.0	6.9	chr12	53148783	53149102	(80126207)	+	AluSc8	SINE/Alu	1	298	(13)	854156
840	24.6	0.0	1.6	chr12	53149303	53149484	(80125825)	+	L1MC4	LINE/L1	6734	6912	(1130)	854157
1071	8.8	0.7	0.0	chr12	53228734	53228870	(80046439)	C	AluSp	SINE/Alu	(173)	140	3	854297
13	16.9	4.8	2.3	chr12	53228985	53229026	(80046283)	+	GA-rich	Low_complexity	1	44	(0)	854298
1220	23.9	5.6	7.8	chr12	53272105	53272502	(80002807)	C	L2a	LINE/L2	(20)	3406	3012	854390
12	14.9	8.1	0.0	chr12	53371096	53371132	(79904177)	+	(CTCCT)n	Simple_repeat	1	40	(0)	854609
13	20.3	0.0	4.7	chr12	53493035	53493077	(79782232)	+	G-rich	Low_complexity	1	43	(0)	854860
113	0.0	0.0	0.0	chr12	53498909	53499004	(79776305)	+	(TG)n	Simple_repeat	1	96	(0)	854870
24	16.6	3.7	0.0	chr12	53499492	53499545	(79775764)	+	(CCT)n	Simple_repeat	1	56	(0)	854871
23	14.9	0.0	0.0	chr12	53568401	53568438	(79706871)	+	(CT)n	Simple_repeat	1	38	(0)	854997
1673	19.9	3.1	1.4	chr12	53576351	53576701	(79698608)	+	MLT1A1	LTR/ERVL-MaLR	1	357	(51)	855018
440	28.1	8.2	0.7	chr12	53601418	53601553	(79673756)	+	UCON62	DNA?	1	147	(30)	855057
355	35.2	9.3	0.8	chr12	53727786	53728020	(79547289)	C	MIRc	SINE/MIR	(8)	260	4	855348
36	7.7	0.0	3.3	chr12	53739942	53740001	(79535308)	+	(GGGGCG)n	Simple_repeat	1	60	(0)	855368
760	21.3	5.6	0.0	chr12	53740221	53740389	(79534920)	C	MIRb	SINE/MIR	(76)	192	14	855369
15	22.9	2.7	6.5	chr12	53758574	53758648	(79516661)	+	(CCCT)n	Simple_repeat	1	77	(0)	855403
19	19.7	0.0	2.1	chr12	53758702	53758749	(79516560)	+	(TCTG)n	Simple_repeat	1	48	(0)	855404
12	16.9	0.0	0.0	chr12	53758811	53758837	(79516472)	+	(CTCC)n	Simple_repeat	1	27	(0)	855405
13	9.9	2.6	7.7	chr12	53791855	53791892	(79483417)	+	(AAT)n	Simple_repeat	1	39	(0)	855467
1193	15.5	2.4	0.0	chr12	53807094	53807293	(79468016)	C	L1MB3	LINE/L1	(2)	6181	5977	855482
16	13.3	0.0	9.8	chr12	53938781	53938831	(79336478)	+	G-rich	Low_complexity	1	51	(0)	855692
12	20.7	4.7	2.2	chr12	53964393	53964435	(79310874)	+	G-rich	Low_complexity	1	45	(0)	855716
23	17.1	4.2	4.0	chr12	53973947	53974017	(79301292)	+	G-rich	Low_complexity	1	74	(0)	855722
16	7.7	11.3	5.8	chr12	53976483	53976544	(79298765)	+	(GGCA)n	Simple_repeat	1	69	(0)	855725
14	18.9	6.0	1.9	chr12	53978442	53978491	(79296818)	+	(CACCC)n	Simple_repeat	1	53	(0)	855727
12	28.2	2.1	0.0	chr12	53986683	53986729	(79288580)	+	(TGTTTTC)n	Simple_repeat	1	48	(0)	855735
15	23.0	3.0	4.4	chr12	53989642	53989707	(79285602)	+	G-rich	Low_complexity	1	68	(0)	855736
13	13.1	0.0	0.0	chr12	53989719	53989743	(79285566)	+	(CTCA)n	Simple_repeat	1	25	(0)	855737
17	21.9	10.1	0.0	chr12	53994769	53994847	(79280462)	+	(GCGA)n	Simple_repeat	1	87	(0)	855738
13	29.7	5.6	0.0	chr12	53995957	53996027	(79279282)	+	G-rich	Low_complexity	1	75	(0)	855739
21	23.5	1.5	2.9	chr12	53999479	53999546	(79275763)	+	(CCCT)n	Simple_repeat	1	69	(0)	855740
79	0.9	10.0	0.0	chr12	54013946	54014055	(79261254)	+	(TC)n	Simple_repeat	1	121	(0)	855755
13	8.5	4.0	0.0	chr12	54017052	54017076	(79258233)	+	(GGGGA)n	Simple_repeat	1	26	(0)	855759
26	18.7	1.6	1.6	chr12	54017343	54017405	(79257904)	+	GA-rich	Low_complexity	1	64	(0)	855760
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
18	17.5	0.0	0.0	chr12	54027559	54027591	(79247718)	+	(CT)n	Simple_repeat	1	33	(0)	855764
17	22.0	2.3	0.0	chr12	54032808	54032851	(79242458)	+	(TCCC)n	Simple_repeat	1	45	(0)	855768
16	8.3	0.0	0.0	chr12	54037581	54037606	(79237703)	+	(AAAT)n	Simple_repeat	1	26	(0)	855772
16	17.5	0.0	0.0	chr12	54055614	54055646	(79219663)	+	(CTC)n	Simple_repeat	1	33	(0)	855787
17	16.0	0.0	7.0	chr12	54082554	54082566	(79192743)	+	G-rich	Low_complexity	1	12	(0)	855838
48	0.0	0.0	2.1	chr12	54082567	54082614	(79192695)	+	(CCGGGG)n	Simple_repeat	1	48	(0)	855839
12	24.0	2.6	0.0	chr12	54140956	54140994	(79134315)	+	(CTC)n	Simple_repeat	1	40	(0)	855933
260	29.4	0.0	0.0	chr12	54145546	54145630	(79129679)	C	MER121	DNA/hAT?	(183)	218	134	855937
12	20.2	0.0	6.7	chr12	54145647	54145691	(79129618)	+	G-rich	Low_complexity	1	45	(0)	855938
14	29.9	1.6	1.6	chr12	54173413	54173475	(79101834)	+	(CGCGG)n	Simple_repeat	1	64	(0)	855981
12	30.5	0.0	5.6	chr12	54391299	54391369	(78883940)	+	G-rich	Low_complexity	1	71	(0)	856367
13	15.5	9.3	0.0	chr12	54418348	54418390	(78856919)	+	G-rich	Low_complexity	1	47	(0)	856406
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
12	15.8	2.6	5.0	chr12	54555806	54555844	(78719465)	+	(CTCCCTT)n	Simple_repeat	1	40	(0)	856645
15	14.0	4.9	2.3	chr12	54588677	54588717	(78686592)	+	(CCGCCC)n	Simple_repeat	1	43	(0)	856692
18	6.2	2.6	5.1	chr12	54590926	54590963	(78684346)	+	(GAGGAGG)n	Simple_repeat	1	39	(0)	856695
16	14.5	0.0	6.8	chr12	55729014	55729057	(77546252)	+	(GCCCC)n	Simple_repeat	1	44	(0)	858131
48	31.8	4.5	1.8	chr12	55742749	55743013	(77532296)	+	(TC)n	Simple_repeat	1	277	(0)	858161
19	10.9	5.0	0.0	chr12	55745572	55745611	(77529698)	+	G-rich	Low_complexity	1	42	(0)	858164
1000	24.0	21.6	1.2	chr12	55811813	55812499	(77462810)	+	L2a	LINE/L2	2587	3422	(4)	858298
348	20.3	7.6	5.7	chr12	55845763	55845903	(77429406)	C	L1ME4a	LINE/L1	(1)	6123	5980	858347
15	11.6	0.0	0.0	chr12	55846009	55846036	(77429273)	+	(GGAGG)n	Simple_repeat	1	28	(0)	858348
20	7.7	0.0	0.0	chr12	55846128	55846144	(77429165)	+	(A)n	Simple_repeat	1	17	(0)	858349
1218	17.8	7.6	7.3	chr12	55846145	55846431	(77428878)	C	AluSc	SINE/Alu	(21)	288	1	858350
13	10.0	9.1	0.0	chr12	55930939	55930971	(77344338)	+	(GTAT)n	Simple_repeat	1	36	(0)	858557
190	29.6	6.9	2.9	chr12	55963616	55963754	(77311555)	+	L3b	LINE/CR1	4890	5034	(198)	858626
12	24.4	0.0	2.6	chr12	55963867	55963904	(77311405)	+	(TCCCT)n	Simple_repeat	1	38	(0)	858627
13	13.2	0.0	0.0	chr12	55974045	55974069	(77301240)	+	(GAG)n	Simple_repeat	1	25	(0)	858642
12	25.4	1.6	6.2	chr12	56007537	56007599	(77267710)	+	(GCC)n	Simple_repeat	1	64	(0)	858708
12	31.4	0.0	1.9	chr12	56020985	56021037	(77254272)	+	(CCCT)n	Simple_repeat	1	53	(0)	858729
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
15	11.5	0.0	3.2	chr12	56221859	56221889	(77053420)	+	(GGGAA)n	Simple_repeat	1	31	(0)	859117
12	16.3	2.8	2.7	chr12	56224440	56224475	(77050834)	+	G-rich	Low_complexity	1	37	(0)	859122
11	17.9	2.9	2.8	chr12	56333340	56333374	(76941935)	+	G-rich	Low_complexity	1	36	(0)	859323
17	19.3	0.0	2.3	chr12	56488251	56488293	(76787016)	+	G-rich	Low_complexity	1	43	(0)	859634
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
16	19.6	2.9	0.0	chr12	57016672	57016706	(76258603)	+	(CA)n	Simple_repeat	1	36	(0)	860551
40	4.9	0.0	0.0	chr12	57111277	57111319	(76163990)	+	(CA)n	Simple_repeat	1	43	(0)	860714
12	18.4	5.4	0.0	chr12	57111422	57111458	(76163851)	+	GA-rich	Low_complexity	1	39	(0)	860715
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
185	35.5	7.3	2.6	chr12	57181481	57181636	(76093673)	C	L2c	LINE/L2	(222)	3165	3002	860830
335	33.9	11.8	1.7	chr12	57181652	57181902	(76093407)	C	L2c	LINE/L2	(545)	2874	2592	860830
27	26.5	4.2	1.0	chr12	57221949	57222044	(76053265)	+	GA-rich	Low_complexity	1	100	(0)	860869
13	23.2	0.0	0.0	chr12	57237169	57237204	(76038105)	+	(CAGCC)n	Simple_repeat	1	36	(0)	860885
15	14.6	5.3	0.0	chr12	57243504	57243545	(76031764)	+	(CCCTCGC)n	Simple_repeat	1	44	(0)	860887
11	17.4	0.0	5.6	chr12	57342291	57342326	(75932983)	+	(CCCTCA)n	Simple_repeat	1	36	(0)	861067
35	16.9	0.0	0.0	chr12	57342451	57342519	(75932790)	+	(CACA)n	Simple_repeat	1	69	(0)	861068
12	11.9	2.3	8.9	chr12	57520866	57520909	(75754400)	+	G-rich	Low_complexity	1	45	(0)	861460
22	31.3	1.7	3.4	chr12	57523024	57523140	(75752169)	+	(CCCCGC)n	Simple_repeat	1	119	(0)	861464
12	18.3	0.0	3.0	chr12	57754535	57754567	(75520742)	+	(CCTC)n	Simple_repeat	1	33	(0)	861784
18	17.1	2.9	7.1	chr12	57754990	57755064	(75520245)	+	(CTCCC)n	Simple_repeat	1	71	(0)	861785
15	13.7	3.1	0.0	chr12	57844889	57844920	(75430389)	+	(CTCC)n	Simple_repeat	1	33	(0)	861912
17	18.4	0.0	0.0	chr12	58893800	58893836	(74381473)	+	(CCCTAT)n	Simple_repeat	1	37	(0)	863363
17	16.5	6.0	1.9	chr12	58926046	58926095	(74349214)	+	(TTC)n	Simple_repeat	1	53	(0)	863403
13	17.4	0.0	2.9	chr12	59596063	59596096	(73679213)	+	(CGCCTC)n	Simple_repeat	1	34	(0)	864295
21	0.0	5.9	2.8	chr12	59596251	59596284	(73679025)	+	(GGA)n	Simple_repeat	1	36	(0)	864296
13457	26.0	6.9	3.9	chr12	62289739	62292684	(70982625)	C	L1PA15-16	LINE/L1	(3098)	4110	1065	867729
16	0.0	0.0	0.0	chr12	62703378	62703394	(70571915)	+	(T)n	Simple_repeat	1	17	(0)	868354
3996	18.5	3.5	5.1	chr12	62759203	62760761	(70514548)	+	HERVH-int	LTR/ERV1	1	1516	(6197)	868432
3324	18.7	2.9	3.3	chr12	62803364	62804195	(70471114)	+	L1M3	LINE/L1	3882	5429	(813)	868506
30	5.6	0.0	0.0	chr12	63360007	63360043	(69915266)	+	(CCTCTC)n	Simple_repeat	1	37	(0)	869318
1507	22.2	6.5	6.1	chr12	63420255	63420769	(69854540)	C	LTR55	LTR/ERVL?	(5)	543	25	869383
21	17.9	1.8	3.6	chr12	63844633	63844687	(69430622)	+	(TCC)n	Simple_repeat	1	56	(0)	870033
19	27.1	0.0	5.1	chr12	64691667	64691744	(68583565)	+	G-rich	Low_complexity	1	78	(0)	871637
395	27.3	16.2	1.8	chr12	65266719	65266886	(68008423)	+	MIR	SINE/MIR	13	209	(53)	872554
11	21.5	4.4	2.1	chr12	65278562	65278606	(67996703)	+	(GGCGGCC)n	Simple_repeat	1	47	(0)	872574
29	3.2	0.0	0.0	chr12	65278805	65278836	(67996473)	+	(CTCTGC)n	Simple_repeat	1	32	(0)	872575
19	21.1	2.0	0.0	chr12	65278877	65278925	(67996384)	+	(CTCCC)n	Simple_repeat	1	50	(0)	872576
441	33.6	4.0	2.2	chr12	65602915	65603138	(67672171)	+	L2a	LINE/L2	3146	3414	(12)	873029
804	31.8	1.9	2.6	chr12	65606635	65606902	(67668407)	+	MIRb	SINE/MIR	3	268	(0)	873035
46	29.5	1.9	0.0	chr12	65741513	65741668	(67533641)	+	(GGCGG)n	Simple_repeat	1	159	(0)	873260
16	16.5	0.0	0.0	chr12	65826781	65826807	(67448502)	+	A-rich	Low_complexity	1	27	(0)	873419
60	24.2	1.3	1.3	chr12	65834492	65834647	(67440662)	+	(TTCC)n	Simple_repeat	1	158	(0)	873423
256	25.4	0.0	1.7	chr12	65834649	65834708	(67440601)	C	L2b	LINE/L2	(5)	3370	3312	873424
597	31.0	10.3	4.5	chr12	66627522	66627923	(66647386)	+	MLT1K	LTR/ERVL-MaLR	1	428	(167)	874640
16	30.0	0.0	0.0	chr12	67068824	67068868	(66206441)	+	(CC)n	Simple_repeat	1	45	(0)	875352
16	18.1	0.0	6.1	chr12	67068997	67069045	(66206264)	+	(CGGCCC)n	Simple_repeat	1	49	(0)	875353
212	38.0	7.1	6.1	chr12	67280614	67280893	(65994416)	C	Tigger19b	DNA/TcMar-Tigger	(85)	465	183	875670
12	12.0	0.0	6.5	chr12	67649960	67649990	(65625319)	+	(GCGG)n	Simple_repeat	1	31	(0)	876224
13	26.5	0.0	0.0	chr12	67666853	67666890	(65608419)	+	(CTCC)n	Simple_repeat	1	38	(0)	876236
1480	25.0	13.6	2.3	chr12	68279424	68280127	(64995182)	+	L1ME4b	LINE/L1	94	889	(3)	877120
330	20.3	1.3	0.0	chr12	68539015	68539088	(64736221)	C	LTR85a	LTR/Gypsy?	(608)	94	20	877577
1778	13.2	0.0	8.6	chr12	68676331	68676634	(64598675)	+	AluJb	SINE/Alu	1	278	(34)	877840
27	3.3	0.0	0.0	chr12	68676639	68676669	(64598640)	+	(AGGGG)n	Simple_repeat	1	31	(0)	877841
56	15.9	0.9	1.8	chr12	68676670	68676780	(64598529)	+	GA-rich	Low_complexity	1	112	(0)	877842
13	16.8	0.0	5.4	chr12	68933059	68933095	(64342214)	+	(CCT)n	Simple_repeat	1	37	(0)	878376
962	21.3	15.7	3.5	chr12	69156870	69157341	(64117968)	C	LTR50	LTR/ERVL	(141)	654	22	878797
17	7.9	0.0	0.0	chr12	69703218	69703244	(63572065)	+	(TGGG)n	Simple_repeat	1	27	(0)	879761
44	13.7	1.2	2.3	chr12	69703297	69703381	(63571928)	+	GA-rich	Low_complexity	1	86	(0)	879762
362	27.6	14.2	8.6	chr12	69703455	69703638	(63571671)	C	Charlie22a	DNA/hAT-Charlie	(3)	488	273	879763
14	35.6	0.0	1.4	chr12	70610384	70610455	(62664854)	+	(CCCT)n	Simple_repeat	1	70	(0)	881162
48	7.8	7.3	5.3	chr12	71582943	71583065	(61692244)	+	GA-rich	Low_complexity	1	132	(0)	882527
23	30.3	4.6	0.9	chr12	75390913	75391020	(57884289)	+	(CCTCTCC)n	Simple_repeat	1	113	(0)	887474
15	12.0	7.3	1.4	chr12	75725052	75725086	(57550223)	+	GA-rich	Low_complexity	1	37	(0)	887981
412	25.8	11.2	4.3	chr12	76319218	76319448	(56955861)	+	MIR	SINE/MIR	1	249	(13)	889069
30	17.9	3.9	1.2	chr12	76319449	76319527	(56955782)	+	(TCTA)n	Simple_repeat	1	81	(0)	889070
17	4.9	0.0	0.0	chr12	76319527	76319547	(56955762)	+	(TG)n	Simple_repeat	1	21	(0)	889071
17	16.4	0.0	0.0	chr12	76319561	76319594	(56955715)	+	(TCA)n	Simple_repeat	1	34	(0)	889072
27755	2.9	0.1	0.8	chr12	76319625	76325685	(56949624)	+	L1PA3	LINE/L1	124	6143	(12)	889073
13	16.2	5.4	6.8	chr12	76764091	76764146	(56511163)	+	GA-rich	Low_complexity	1	59	(0)	889813
17	14.2	8.9	1.6	chr12	76764146	76764201	(56511108)	+	(GCTCGC)n	Simple_repeat	1	61	(0)	889814
1482	12.9	2.0	15.2	chr12	76908361	76908702	(56366607)	+	AluJr	SINE/Alu	2	297	(15)	890058
16	17.2	7.4	1.7	chr12	77065820	77065843	(56209466)	+	(CGG)n	Simple_repeat	1	57	(0)	890306
16	11.3	0.0	0.0	chr12	77065844	77065872	(56209437)	+	(GGCGC)n	Simple_repeat	1	29	(0)	890307
1643	19.0	3.5	1.3	chr12	79680835	79681126	(53594183)	+	AluJb	SINE/Alu	1	299	(13)	893866
39	2.5	0.0	0.0	chr12	79681127	79681167	(53594142)	+	(GGGAG)n	Simple_repeat	1	41	(0)	893867
1643	19.0	3.5	1.3	chr12	79681168	79681180	(53594129)	+	AluJb	SINE/Alu	300	312	(0)	893866
793	17.1	5.8	0.7	chr12	79681313	79681458	(53593851)	+	AluJo	SINE/Alu	136	289	(23)	893868
13	20.8	0.0	0.0	chr12	79934521	79934553	(53340756)	+	(CCCT)n	Simple_repeat	1	33	(0)	894280
12	15.3	5.3	2.5	chr12	79934885	79934922	(53340387)	+	(CGCTTC)n	Simple_repeat	1	40	(0)	894281
20	26.0	1.1	5.7	chr12	80937749	80937835	(52337474)	+	GA-rich	Low_complexity	1	88	(0)	895718
566	29.7	9.6	8.3	chr12	84904003	84904224	(48371085)	+	MLT1H2	LTR/ERVL-MaLR	100	310	(239)	900910
30	0.0	0.0	0.0	chr12	84904225	84904250	(48371059)	+	(GA)n	Simple_repeat	1	26	(0)	900911
602	23.8	9.9	2.6	chr12	84904251	84904471	(48370838)	+	MLT1H2	LTR/ERVL-MaLR	311	549	(0)	900910
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
677	22.7	3.1	1.1	chr12	85282260	85282446	(47992863)	C	L1MA7	LINE/L1	(14)	6277	6087	901407
466	29.0	3.5	4.5	chr12	89326459	89326660	(43948649)	+	MIRc	SINE/MIR	66	265	(3)	906835
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
255	35.8	7.0	2.4	chr12	89783341	89783441	(43491868)	C	MIR1_Amn	SINE/MIR	(72)	158	57	907584
1210	22.5	4.8	12.8	chr12	89783442	89783916	(43491393)	+	LTR16	LTR/ERVL	1	435	(3)	907585
462	28.6	1.7	8.7	chr12	89947862	89948056	(43327253)	C	MIR3	SINE/MIR	(3)	205	25	907823
1097	29.8	7.9	5.5	chr12	90042071	90042635	(43232674)	C	LTR78	LTR/ERV1	(720)	584	5	907965
1405	22.0	3.4	1.7	chr12	90062719	90063010	(43212299)	C	MLT1A0	LTR/ERVL-MaLR	(58)	307	11	908000
603	31.1	9.4	0.5	chr12	90063066	90063288	(43212021)	+	MLT1J2	LTR/ERVL-MaLR	185	429	(19)	908001
33	2.2	8.5	0.0	chr12	92079351	92079397	(41195912)	+	(TC)n	Simple_repeat	1	51	(0)	910883
14	14.7	0.0	3.1	chr12	92990406	92990437	(40284872)	+	GA-rich	Low_complexity	1	32	(0)	912498
609	18.9	0.0	0.9	chr12	92990615	92990721	(40284588)	C	MLT1A	LTR/ERVL-MaLR	(83)	291	186	912499
2141	16.6	12.2	1.7	chr12	93199717	93200127	(40075182)	C	MER65C	LTR/ERV1	(0)	461	2	912935
13	24.7	1.8	3.5	chr12	93378425	93378480	(39896829)	+	G-rich	Low_complexity	1	57	(0)	913326
27	20.4	0.0	0.0	chr12	93378533	93378590	(39896719)	+	(CCCT)n	Simple_repeat	1	58	(0)	913327
30	18.5	2.7	1.3	chr12	93571496	93571570	(39703739)	+	(CTCC)n	Simple_repeat	1	77	(0)	913738
2143	16.1	1.3	0.0	chr12	93886163	93886460	(39388849)	C	AluJb	SINE/Alu	(10)	302	1	914280
21	23.8	1.7	0.0	chr12	94148611	94148669	(39126640)	+	(CCTCC)n	Simple_repeat	1	60	(0)	914753
192	23.1	4.4	3.0	chr12	94616489	94616555	(38658754)	C	L2c	LINE/L2	(0)	3426	3338	915510
403	22.9	19.1	0.7	chr12	94750670	94750814	(38524495)	C	L1MC5a	LINE/L1	(5)	2772	2595	915765
19	24.7	0.0	0.0	chr12	95204692	95204732	(38070577)	+	(AC)n	Simple_repeat	1	41	(0)	916746
533	22.0	9.6	0.8	chr12	95204801	95204933	(38070376)	+	Tigger16a	DNA/TcMar-Tigger	811	956	(1)	916747
245	35.3	6.2	2.9	chr12	95768206	95768345	(37506964)	C	L2c	LINE/L2	(151)	3236	3092	917856
540	36.4	6.3	1.5	chr12	95768543	95768935	(37506374)	C	L2c	LINE/L2	(464)	2955	2543	917856
300	17.4	4.3	1.4	chr12	95836931	95837621	(37437688)	+	GA-rich	Low_complexity	1	721	(0)	917975
1628	19.0	4.3	0.0	chr12	95837625	95837893	(37437416)	+	AluJr	SINE/Alu	10	290	(22)	917976
866	28.7	4.8	3.2	chr12	96064184	96064529	(37210780)	+	MLT1J	LTR/ERVL-MaLR	2	353	(159)	918355
2355	13.5	1.6	3.8	chr12	96064532	96064924	(37210385)	+	Tigger3c	DNA/TcMar-Tigger	219	602	(0)	918356
21	26.4	0.0	0.0	chr12	98397806	98397831	(34877478)	+	(AATTG)n	Simple_repeat	1	26	(0)	922125
2182	8.1	0.3	9.6	chr12	98502720	98503041	(34772268)	+	AluSz	SINE/Alu	1	292	(20)	922373
258	33.7	10.1	1.6	chr12	98646487	98646676	(34628633)	+	L2c	LINE/L2	3180	3387	(0)	922687
601	23.8	4.7	2.4	chr12	98669683	98669850	(34605459)	C	L1ME4a	LINE/L1	(454)	5670	5499	922743
37	13.3	1.2	3.7	chr12	98669857	98669936	(34605373)	+	(CCTCC)n	Simple_repeat	1	81	(0)	922744
1773	17.7	0.4	1.8	chr12	98669962	98670243	(34605066)	C	AluJb	SINE/Alu	(34)	278	1	922745
1551	20.1	6.1	3.6	chr12	98696105	98696557	(34578752)	C	MSTA1	LTR/ERVL-MaLR	(31)	434	1	922798
12	15.7	2.6	5.0	chr12	99984929	99984967	(33290342)	+	(GGCG)n	Simple_repeat	1	40	(0)	924663
14	21.4	2.2	2.2	chr12	100267187	100267231	(33008078)	+	(CCCCT)n	Simple_repeat	1	46	(0)	925231
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
65	16.5	0.0	0.0	chr12	101940502	101940615	(31334694)	+	G-rich	Low_complexity	1	114	(0)	928308
18	21.0	0.0	6.5	chr12	103495380	103495441	(29779868)	+	(CCCGC)n	Simple_repeat	1	62	(0)	930743
5987	21.7	5.7	3.9	chr12	104201073	104201957	(29073352)	C	L1MA4	LINE/L1	(4319)	2246	1327	932048
25	12.2	0.0	0.0	chr12	104457786	104457822	(28817487)	+	(T)n	Simple_repeat	1	37	(0)	932621
15	17.8	3.6	5.2	chr12	104669194	104669249	(28606060)	+	(CCTCC)n	Simple_repeat	1	58	(0)	933058
560	25.7	3.6	5.1	chr12	105235510	105235706	(28039603)	C	MIR	SINE/MIR	(32)	230	37	934030
186	18.2	6.4	0.0	chr12	105330337	105330380	(27944929)	C	L2c	LINE/L2	(3)	3384	3338	934180
994	29.5	3.4	4.2	chr12	106024890	106025043	(27250266)	+	MLT1J	LTR/ERVL-MaLR	356	504	(8)	935459
1513	20.5	4.4	6.9	chr12	106025123	106025499	(27249810)	+	MLT1A	LTR/ERVL-MaLR	4	370	(4)	935461
2121	13.5	2.7	2.9	chr12	106036911	106037284	(27238025)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	935488
487	25.0	3.4	6.5	chr12	106037285	106037330	(27237979)	+	LTR79	LTR/ERVL	107	149	(378)	935487
178	23.2	4.8	3.1	chr12	106037357	106037978	(27237331)	+	(TCCTC)n	Simple_repeat	1	652	(0)	935489
345	25.4	11.7	7.9	chr12	106072262	106072590	(27202719)	+	L1ME4a	LINE/L1	5771	6113	(11)	935550
13	10.8	6.7	0.0	chr12	106072664	106072698	(27202611)	+	(CCTCC)n	Simple_repeat	1	37	(0)	935551
1041	20.5	23.9	3.7	chr12	106424731	106425212	(26850097)	C	L1MCc	LINE/L1	(1485)	5456	4847	936228
1932	14.4	2.4	1.1	chr12	106451346	106451630	(26823679)	+	AluSz	SINE/Alu	1	289	(23)	936274
21	11.2	2.6	0.0	chr12	106451631	106451669	(26823640)	+	(GGAGG)n	Simple_repeat	1	40	(0)	936275
13	23.2	0.0	0.0	chr12	106956029	106956064	(26319245)	+	(CCCGGC)n	Simple_repeat	1	36	(0)	937152
11	22.1	3.9	3.8	chr12	106956101	106956151	(26319158)	+	(CCCTGCC)n	Simple_repeat	1	53	(0)	937153
554	18.3	3.4	0.0	chr12	106956654	106956768	(26318541)	C	MamRep1879	DNA/hAT-Tip100?	(90)	126	8	937154
13	21.3	2.1	4.2	chr12	107094093	107094139	(26181170)	+	G-rich	Low_complexity	1	48	(0)	937396
26	17.6	0.0	5.6	chr12	107321275	107321345	(25953964)	+	(GTGTGC)n	Simple_repeat	1	71	(0)	937869
199	34.1	0.0	6.4	chr12	108241978	108242071	(25033238)	+	MIR	SINE/MIR	171	258	(4)	939831
60	18.4	0.0	0.0	chr12	108468635	108468748	(24806561)	+	G-rich	Low_complexity	1	114	(0)	940361
197	31.9	14.6	4.0	chr12	108634456	108634778	(24640531)	C	L2c	LINE/L2	(0)	3387	3025	940719
18	17.9	0.0	4.2	chr12	108731549	108731596	(24543713)	+	(CCGCCC)n	Simple_repeat	1	48	(0)	940859
144	6.8	0.0	0.0	chr12	108859843	108860032	(24415277)	+	(GAGGG)n	Simple_repeat	1	190	(0)	941131
322	25.6	0.8	8.3	chr12	108860039	108860170	(24415139)	+	MER20B	DNA/hAT-Charlie	349	470	(313)	941132
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
22	18.9	4.3	2.7	chr12	109291552	109291621	(23983688)	+	(CTCTCC)n	Simple_repeat	1	73	(0)	942211
250	23.8	10.3	7.6	chr12	109560740	109560871	(23714438)	+	L2b	LINE/L2	3226	3377	(10)	942738
15	23.5	7.0	2.6	chr12	109560936	109561006	(23714303)	+	(CCT)n	Simple_repeat	1	76	(0)	942739
41	16.0	0.0	5.9	chr12	109561007	109561036	(23714273)	+	(CCCTCT)n	Simple_repeat	2	102	(0)	942740
22	18.1	8.9	2.3	chr12	109670844	109670922	(23604387)	+	(TC)n	Simple_repeat	1	86	(0)	943025
2229	13.4	0.0	0.0	chr12	109704118	109704424	(23570885)	+	AluSx1	SINE/Alu	1	307	(5)	943124
272	28.8	2.1	4.0	chr12	109739359	109739466	(23535843)	+	L2b	LINE/L2	3292	3375	(0)	943201
187	36.5	0.0	6.6	chr12	109739480	109739570	(23535739)	+	L2c	LINE/L2	3303	3387	(0)	943202
655	28.1	6.1	6.9	chr12	109821832	109821968	(23453341)	+	L2b	LINE/L2	3220	3361	(14)	943386
14	19.2	2.8	0.0	chr12	109822063	109822098	(23453211)	+	GA-rich	Low_complexity	1	37	(0)	943388
307	33.0	5.1	3.3	chr12	110267279	110267488	(23007821)	+	AmnSINE1	SINE/5S-Deu-L2	265	478	(97)	944384
13	24.4	0.0	4.3	chr12	110281353	110281399	(22993910)	+	(CGCCC)n	Simple_repeat	1	47	(0)	944414
855	18.2	5.4	0.0	chr12	110906081	110906239	(22369070)	+	MER20	DNA/hAT-Charlie	1	168	(51)	945870
28	26.8	3.0	1.9	chr12	110906271	110906371	(22368938)	+	GA-rich	Low_complexity	1	104	(0)	945871
366	30.5	4.8	4.3	chr12	110906381	110906565	(22368744)	+	HAL1b	LINE/L1	2235	2420	(1)	945872
14	21.1	6.1	0.0	chr12	111033778	111033792	(22241517)	+	(CGCCGG)n	Simple_repeat	1	50	(0)	946172
14	10.8	3.1	3.0	chr12	111033793	111033824	(22241485)	+	(CGG)n	Simple_repeat	1	33	(0)	946173
13	15.9	5.7	0.0	chr12	111033841	111033875	(22241434)	+	(CCTCC)n	Simple_repeat	1	37	(0)	946174
39	0.0	2.3	2.2	chr12	111034713	111034756	(22240553)	+	(GGA)n	Simple_repeat	1	45	(0)	946177
36	20.4	4.5	2.6	chr12	111034783	111034894	(22240415)	+	(CCG)n	Simple_repeat	1	117	(0)	946178
13	20.5	0.0	2.8	chr12	111180671	111180706	(22094603)	+	(CTCCT)n	Simple_repeat	1	36	(0)	946456
214	35.1	2.5	0.0	chr12	111314165	111314241	(21961068)	C	L2c	LINE/L2	(0)	3387	3309	946778
231	25.3	5.4	4.4	chr12	111321803	111321893	(21953416)	C	L2c	LINE/L2	(160)	3227	3136	946805
21	12.7	2.3	0.0	chr12	111322014	111322035	(21953274)	+	(GAGGG)n	Simple_repeat	1	22	(0)	946806
2107	11.7	1.3	2.6	chr12	111322036	111322344	(21952965)	+	AluSz6	SINE/Alu	1	305	(7)	946807
475	28.4	4.1	2.1	chr12	111404740	111404883	(21870426)	C	MIRb	SINE/MIR	(22)	246	100	947028
3977	15.5	1.8	6.1	chr12	111432501	111433069	(21842240)	C	L1MB7	LINE/L1	(13)	6171	5592	947096
549	25.6	0.6	1.9	chr12	111867818	111867976	(21407333)	C	L1MC5	LINE/L1	(11)	9293	9137	948064
13	18.9	0.0	0.0	chr12	113149928	113149957	(20125352)	+	GA-rich	Low_complexity	1	30	(0)	950910
293	15.7	0.0	0.0	chr12	113150020	113150070	(20125239)	C	MIRb	SINE/MIR	(102)	166	116	950911
12	17.5	0.0	5.6	chr12	113329652	113329687	(19945622)	+	(CTTC)n	Simple_repeat	1	36	(0)	951302
897	25.1	16.0	0.6	chr12	113329776	113330264	(19945045)	+	L2b	LINE/L2	2799	3373	(2)	951303
13	4.7	0.0	4.2	chr12	113334376	113334399	(19940910)	+	(GGGA)n	Simple_repeat	1	24	(0)	951312
21	24.2	0.0	6.8	chr12	113335143	113335230	(19940079)	+	(CCCGC)n	Simple_repeat	1	88	(0)	951315
1742	18.1	2.0	0.3	chr12	113366474	113366761	(19908548)	C	AluJr	SINE/Alu	(9)	303	11	951409
1736	14.9	5.1	0.3	chr12	113366824	113367105	(19908204)	C	AluSg	SINE/Alu	(14)	296	1	951410
321	27.4	0.0	0.0	chr12	113422146	113422229	(19853080)	+	MIRc	SINE/MIR	65	148	(120)	951560
37	7.8	0.0	1.8	chr12	113754141	113754197	(19521112)	+	(GGAGG)n	Simple_repeat	1	57	(0)	952415
769	14.6	0.0	1.6	chr12	113754226	113754348	(19520961)	C	AluJr	SINE/Alu	(190)	122	2	952416
219	25.2	13.4	1.9	chr12	113754360	113754464	(19520845)	C	L2a	LINE/L2	(291)	3135	3017	952414
1876	15.9	0.0	0.0	chr12	114654237	114654507	(18620802)	+	AluSz	SINE/Alu	7	277	(35)	954218
17	16.3	0.0	0.0	chr12	114654516	114654550	(18620759)	+	G-rich	Low_complexity	1	35	(0)	954219
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
15	13.7	0.0	0.0	chr12	114688797	114688820	(18586489)	+	(C)n	Simple_repeat	1	24	(0)	954273
464	28.6	6.5	8.8	chr12	114733698	114733935	(18541374)	C	MIRc	SINE/MIR	(36)	232	1	954381
14	4.9	0.0	0.0	chr12	114734072	114734092	(18541217)	+	(ACCC)n	Simple_repeat	1	21	(0)	954382
33	4.3	0.0	3.9	chr12	115452217	115452268	(17823041)	+	(CTCCC)n	Simple_repeat	1	52	(0)	956041
25	21.4	0.0	0.0	chr12	115452362	115452454	(17822855)	+	(GT)n	Simple_repeat	1	93	(0)	956042
287	18.9	1.9	0.0	chr12	115570634	115570686	(17704623)	C	L2a	LINE/L2	(0)	3426	3373	956300
832	31.4	12.2	1.5	chr12	115695784	115696459	(17578850)	C	L2a	LINE/L2	(0)	3426	2666	956580
17	25.2	1.5	4.4	chr12	116213192	116213258	(17062051)	+	G-rich	Low_complexity	1	68	(0)	957534
2144	11.7	2.0	0.7	chr12	116261214	116261511	(17013798)	+	AluSq	SINE/Alu	1	302	(11)	957602
20	19.6	1.5	6.0	chr12	116277602	116277668	(16997641)	+	(TCC)n	Simple_repeat	1	64	(0)	957622
21	24.9	1.4	2.8	chr12	116277749	116277818	(16997491)	+	(GGC)n	Simple_repeat	1	71	(0)	957623
17	10.8	0.0	0.0	chr12	116277869	116277898	(16997411)	+	(GAGG)n	Simple_repeat	1	30	(0)	957624
2231	20.4	2.0	8.6	chr12	116437714	116438352	(16836957)	C	L1MB7	LINE/L1	(58)	6126	5531	958049
18	19.7	0.0	3.9	chr12	116455985	116456035	(16819274)	+	(TTCTTT)n	Simple_repeat	1	51	(0)	958098
13	8.9	6.5	1.5	chr12	116456041	116456072	(16819237)	+	A-rich	Low_complexity	1	33	(0)	958099
91	28.6	2.4	3.5	chr12	116525162	116525500	(16749809)	+	(TTCT)n	Simple_repeat	1	347	(0)	958287
18	7.2	3.3	0.0	chr12	116534059	116534088	(16741221)	+	(CTC)n	Simple_repeat	1	31	(0)	958310
172	15.9	4.9	4.2	chr12	116737305	116737777	(16537532)	+	GA-rich	Low_complexity	1	496	(0)	958800
19	14.8	3.5	5.0	chr12	116737904	116737961	(16537348)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	958801
263	28.8	4.1	2.5	chr12	116958650	116958770	(16316539)	C	L2c	LINE/L2	(178)	3209	3087	959343
2341	9.5	0.0	0.0	chr12	117079280	117079574	(16195735)	+	AluSx1	SINE/Alu	1	295	(17)	959523
1317	19.9	2.2	5.7	chr12	117079580	117079915	(16195394)	+	L1MB8	LINE/L1	5855	6178	(0)	959524
335	30.1	13.3	8.5	chr12	117192072	117192434	(16082875)	+	L2c	LINE/L2	2998	3380	(7)	959749
289	33.7	11.8	0.0	chr12	117463141	117463312	(15811997)	C	L3	LINE/CR1	(47)	4052	3858	960423
876	20.2	6.6	0.4	chr12	117463417	117463645	(15811664)	C	MER58B	DNA/hAT-Charlie	(24)	317	74	960424
182	30.1	9.8	4.6	chr12	117495671	117495757	(15779552)	C	MamRTE1	LINE/RTE-BovB	(3047)	765	674	960484
2431	8.3	0.0	0.3	chr12	117495773	117496072	(15779237)	+	AluSc	SINE/Alu	1	299	(10)	960485
239	32.0	4.6	0.1	chr12	117850283	117850397	(15424912)	C	L2c	LINE/L2	(205)	3170	3053	961208
52	12.9	1.1	1.1	chr12	117968580	117968669	(15306640)	+	GA-rich	Low_complexity	1	91	(0)	961511
587	32.7	7.9	2.8	chr12	118098475	118098763	(15176546)	C	L2b	LINE/L2	(34)	3341	3037	961833
501	27.2	11.2	1.0	chr12	118102372	118102564	(15172745)	C	MER102c	DNA/hAT-Charlie	(15)	316	102	961848
320	27.6	13.1	9.9	chr12	118377294	118377506	(14897803)	+	MIRb	SINE/MIR	34	254	(14)	962449
72	12.7	1.9	4.5	chr12	119850387	119850540	(13424769)	+	G-rich	Low_complexity	1	157	(0)	965612
308	30.9	2.3	0.0	chr12	119850555	119850680	(13424629)	C	MER113A	DNA/hAT-Charlie	(0)	314	186	965613
17	3.3	6.1	2.9	chr12	120116651	120116683	(13158626)	+	(GGCG)n	Simple_repeat	1	35	(0)	966261
15	27.2	1.6	3.2	chr12	120116778	120116838	(13158471)	+	(CCT)n	Simple_repeat	1	62	(0)	966262
11	25.8	0.0	7.8	chr12	120117232	120117295	(13158014)	+	(GGCCCC)n	Simple_repeat	1	64	(0)	966263
14	8.3	3.9	0.0	chr12	120367536	120367561	(12907748)	+	(GGGA)n	Simple_repeat	1	27	(0)	966844
874	20.2	4.6	10.7	chr12	120439734	120439966	(12835343)	C	MER20	DNA/hAT-Charlie	(1)	218	1	967089
253	11.8	8.9	1.9	chr12	120495509	120495560	(12779749)	C	MER45B	DNA/hAT-Tip100	(0)	1040	985	967221
455	20.3	6.8	2.4	chr12	120550111	120550236	(12725073)	C	MER3	DNA/hAT-Charlie	(39)	170	39	967359
368	21.2	18.5	0.0	chr12	120550243	120550374	(12724935)	C	L2a	LINE/L2	(2518)	901	740	967354
411	24.7	16.0	1.2	chr12	120550393	120550552	(12724757)	C	L2a	LINE/L2	(2989)	430	243	967354
220	29.4	4.7	3.8	chr12	120648899	120648933	(12626376)	C	MIRc	SINE/MIR	(190)	78	43	967594
13	13.2	0.0	0.0	chr12	120649056	120649080	(12626229)	+	(CTC)n	Simple_repeat	1	25	(0)	967596
1502	32.8	10.8	6.4	chr12	120799432	120800040	(12475269)	+	L4_A_Mam	LINE/RTE-X	2442	3069	(1921)	967879
1704	11.7	8.4	2.1	chr12	121209781	121209899	(12065410)	C	AluJr	SINE/Alu	(174)	138	1	968857
19	16.8	2.0	3.9	chr12	121352690	121352740	(11922569)	+	(GTT)n	Simple_repeat	1	52	(0)	969185
12	13.4	9.3	2.1	chr12	121579667	121579709	(11695600)	+	(CTCCCTC)n	Simple_repeat	1	47	(0)	969717
13	23.3	3.9	1.9	chr12	121579911	121579935	(11695374)	+	A-rich	Low_complexity	1	52	(0)	969718
20	10.8	5.0	0.0	chr12	121580570	121580609	(11694700)	+	G-rich	Low_complexity	1	42	(0)	969721
928	27.4	4.1	2.1	chr12	121673164	121673646	(11601663)	+	L2a	LINE/L2	2811	3316	(110)	970012
210	31.4	1.4	1.4	chr12	121748864	121748934	(11526375)	C	MIRb	SINE/MIR	(178)	90	20	970250
32	4.2	3.9	1.9	chr12	121803919	121803978	(11471331)	+	(GAG)n	Simple_repeat	1	61	(0)	970353
463	33.8	2.9	3.9	chr12	121812309	121812514	(11462795)	+	MIRb	SINE/MIR	50	253	(15)	970364
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
14	17.1	2.3	4.5	chr12	122826224	122826266	(10449043)	+	(CCCT)n	Simple_repeat	1	44	(0)	972786
16	6.8	6.5	0.0	chr12	122835081	122835111	(10440198)	+	(TCCCCC)n	Simple_repeat	1	33	(0)	972808
14	13.7	4.5	4.3	chr12	122888958	122889001	(10386308)	+	(CCCTCC)n	Simple_repeat	1	46	(0)	972872
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
336	29.6	8.0	3.9	chr12	123148694	123148886	(10126423)	C	L2c	LINE/L2	(20)	3367	3152	973406
400	34.6	1.9	2.5	chr12	123149049	123149211	(10126098)	C	MIR3	SINE/MIR	(31)	177	16	973407
11012	9.0	3.9	0.6	chr12	123249828	123251861	(10023448)	C	L1PBa1	LINE/L1	(4515)	2348	252	973619
296	21.2	3.0	1.5	chr12	123272293	123272359	(10002950)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	99	973658
380	21.1	5.9	3.1	chr12	123272426	123272523	(10002786)	C	L2a	LINE/L2	(16)	3410	3310	973659
15	24.3	1.8	3.5	chr12	123364930	123364986	(9910323)	+	(CTCC)n	Simple_repeat	1	58	(0)	973886
274	23.0	14.7	4.4	chr12	123532467	123532557	(9742752)	+	MIR	SINE/MIR	86	187	(75)	974331
242	28.9	3.5	0.0	chr12	123731678	123731760	(9543549)	C	L1MC4	LINE/L1	(1496)	6546	6461	974809
1070	29.8	14.5	3.0	chr12	123731778	123732936	(9542373)	+	L2a	LINE/L2	2107	3382	(44)	974819
2028	14.3	1.3	0.7	chr12	123808029	123808329	(9466980)	C	AluJb	SINE/Alu	(8)	304	2	974981
213	19.4	7.9	7.9	chr12	123808333	123808433	(9466876)	C	L2a	LINE/L2	(606)	2813	2713	974980
34	23.6	6.7	1.9	chr12	123973003	123973151	(9302158)	+	G-rich	Low_complexity	1	159	(0)	975250
14	17.0	0.0	6.7	chr12	123973395	123973439	(9301870)	+	G-rich	Low_complexity	1	45	(0)	975251
2154	23.0	4.7	2.4	chr12	124504424	124505047	(8770262)	+	L1MB5	LINE/L1	5527	6165	(9)	976171
196	14.7	3.8	0.0	chr12	124506807	124506848	(8768461)	+	MIRc	SINE/MIR	76	121	(141)	976175
15	4.3	4.2	0.0	chr12	124528125	124528148	(8747161)	+	(ACC)n	Simple_repeat	1	25	(0)	976217
20	18.3	4.0	5.3	chr12	124531483	124531554	(8743755)	+	GA-rich	Low_complexity	1	71	(0)	976223
240	31.0	5.7	1.0	chr12	124550281	124550381	(8724928)	C	MIR3	SINE/MIR	(73)	135	30	976260
252	30.9	8.9	5.0	chr12	124562337	124562473	(8712836)	C	MIRb	SINE/MIR	(92)	176	30	976282
16	10.0	6.1	0.0	chr12	124566212	124566244	(8709065)	+	GA-rich	Low_complexity	1	35	(0)	976290
18	12.2	0.0	0.0	chr12	124567787	124567833	(8707476)	+	(CA)n	Simple_repeat	1	47	(0)	976295
278	33.5	0.6	2.5	chr12	124608925	124609083	(8666226)	+	L1ME4b	LINE/L1	693	848	(44)	976394
286	30.0	6.2	6.7	chr12	124632367	124632559	(8642750)	+	MIR	SINE/MIR	34	225	(37)	976446
269	17.0	1.9	0.0	chr12	124745566	124745621	(8529688)	+	L2a	LINE/L2	3331	3426	(0)	976732
24	13.0	0.0	0.0	chr12	124745718	124745759	(8529550)	+	(GAAT)n	Simple_repeat	1	42	(0)	976733
1185	17.4	13.2	10.9	chr12	124776147	124776484	(8498825)	+	MLT1B	LTR/ERVL-MaLR	1	350	(40)	976810
20	28.9	4.9	3.1	chr12	124864161	124864282	(8411027)	+	(CCTCCT)n	Simple_repeat	1	128	(0)	976998
848	21.4	2.7	0.0	chr12	124884968	124885145	(8390164)	C	MER5A	DNA/hAT-Charlie	(6)	183	1	977056
301	34.0	7.4	1.1	chr12	124885147	124885336	(8389973)	+	L2	LINE/L2	2689	2891	(528)	977057
22	5.7	0.0	7.0	chr12	124920567	124920609	(8354700)	+	(CTCCC)n	Simple_repeat	1	43	(0)	977149
752	16.4	0.0	0.8	chr12	124920615	124920736	(8354573)	C	FLAM_C	SINE/Alu	(12)	131	11	977150
1687	18.0	11.3	6.3	chr12	124920772	124921198	(8354111)	+	LTR47A	LTR/ERVL	2	452	(0)	977151
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
1847	26.9	9.9	1.3	chr12	124992683	124993439	(8281870)	C	L1MC5a	LINE/L1	(325)	2452	1624	977331
16	9.9	0.0	5.6	chr12	125049863	125049898	(8225411)	+	G-rich	Low_complexity	1	36	(0)	977468
12	12.6	3.7	0.0	chr12	125185891	125185917	(8089392)	+	(CCCTC)n	Simple_repeat	1	28	(0)	977730
23	10.5	3.6	3.5	chr12	125186267	125186314	(8088995)	+	(GCCCCG)n	Simple_repeat	1	48	(0)	977731
44	2.1	2.1	0.0	chr12	125186315	125186362	(8088947)	+	(CTC)n	Simple_repeat	1	49	(0)	977732
21	9.4	0.0	0.0	chr12	125186369	125186402	(8088907)	+	(CGCT)n	Simple_repeat	1	34	(0)	977733
36	24.0	2.7	1.8	chr12	125186406	125186516	(8088793)	+	(GGC)n	Simple_repeat	1	114	(0)	977734
16	0.0	0.0	0.0	chr12	131893958	131893974	(1381335)	+	(T)n	Simple_repeat	1	17	(0)	988780
227	26.9	2.5	0.0	chr12	131893975	131894052	(1381257)	+	L1ME4b	LINE/L1	322	401	(491)	988781
38	29.2	5.5	3.8	chr12	131894105	131894357	(1380952)	+	GA-rich	Low_complexity	1	267	(0)	988782
17	7.9	0.0	0.0	chr12	132162027	132162053	(1113256)	+	(GCCCT)n	Simple_repeat	1	27	(0)	989145
40	7.6	5.7	0.0	chr12	132162293	132162363	(1112946)	+	(CCTCTCC)n	Simple_repeat	1	75	(0)	989146
86	16.2	2.8	4.1	chr12	132437435	132437647	(837662)	+	GA-rich	Low_complexity	1	219	(0)	989456
246	32.8	19.6	0.6	chr12	132488985	132489205	(786104)	+	L2a	LINE/L2	3129	3426	(0)	989528
221	27.3	16.2	0.0	chr12	132522931	132523018	(752291)	+	L2a	LINE/L2	3321	3425	(1)	989560
208	15.8	3.0	3.9	chr12	132597406	132597907	(677402)	+	(CTGTCT)n	Simple_repeat	1	517	(0)	989641
2419	5.8	0.0	0.3	chr12	132686453	132686747	(588562)	+	AluSx1	SINE/Alu	1	294	(18)	989771
1353	17.7	1.3	7.3	chr12	132686748	132686870	(588439)	C	AluJb	SINE/Alu	(196)	116	1	989770
13	28.4	3.3	1.6	chr12	132687508	132687568	(587741)	+	(GGCGC)n	Simple_repeat	1	63	(0)	989772
14	22.0	2.4	0.0	chr12	132687578	132687619	(587690)	+	(GCGCTCC)n	Simple_repeat	1	43	(0)	989773
285	34.2	12.3	3.6	chr12	132708144	132708638	(566671)	C	HAL1	LINE/L1	(1872)	635	92	989818
1604	18.1	0.4	0.0	chr12	132724133	132724386	(550923)	C	AluSz6	SINE/Alu	(21)	291	37	989849
75	23.6	6.2	2.5	chr12	132729358	132729663	(545646)	+	GA-rich	Low_complexity	1	325	(0)	989852
19	11.0	2.4	2.4	chr13	19863432	19863472	(94500856)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	993246
20	16.3	0.0	0.0	chr13	19958915	19958955	(94405373)	+	(CGGAGG)n	Simple_repeat	1	41	(0)	993493
13	14.7	3.3	0.0	chr13	19959005	19959034	(94405294)	+	(CCG)n	Simple_repeat	1	31	(0)	993494
14	25.1	0.0	5.3	chr13	20118862	20118918	(94245410)	+	(CCCCT)n	Simple_repeat	1	57	(0)	993781
41	28.6	1.4	2.8	chr13	20712878	20713017	(93651311)	+	(TTTC)n	Simple_repeat	1	142	(0)	994746
359	23.6	8.0	3.8	chr13	20883008	20883245	(93481083)	+	LTR33	LTR/ERVL	232	515	(0)	995013
949	26.6	9.3	3.3	chr13	20883250	20883718	(93480610)	+	L1MEd	LINE/L1	1846	2524	(5439)	995004
275	26.0	6.3	2.8	chr13	21034534	21034640	(93329688)	+	MLT1J	LTR/ERVL-MaLR	312	422	(90)	995354
667	6.7	5.3	0.0	chr13	23980119	23980207	(90384121)	+	AluYc	SINE/Alu	199	292	(7)	999615
852	28.8	5.8	1.5	chr13	25069891	25070249	(89294079)	C	L1ME2	LINE/L1	(7)	6157	5785	1001245
232	30.2	3.4	2.3	chr13	25836659	25836746	(88527582)	+	L2b	LINE/L2	3287	3375	(0)	1002372
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
315	30.7	14.5	5.1	chr13	26560700	26561296	(87803032)	C	L2c	LINE/L2	(0)	3426	2729	1003466
1978	26.1	9.8	3.5	chr13	26590709	26591846	(87772482)	C	L2a	LINE/L2	(1)	3425	2207	1003514
5337	11.9	4.3	0.4	chr13	27279347	27280150	(87084178)	+	LTR1A2	LTR/ERV1	1	837	(0)	1004635
26	14.3	4.6	7.9	chr13	27388015	27388037	(86976291)	+	G-rich	Low_complexity	1	21	(0)	1004866
31	0.0	0.0	0.0	chr13	27388038	27388064	(86976264)	+	(GA)n	Simple_repeat	1	27	(0)	1004867
26	14.3	4.6	7.9	chr13	27388065	27388149	(86976179)	+	G-rich	Low_complexity	22	104	(0)	1004868
22	21.7	4.6	0.0	chr13	27969177	27969189	(86395139)	+	(TCCC)n	Simple_repeat	1	67	(0)	1005830
18	15.5	7.8	0.0	chr13	27969190	27969240	(86395088)	+	(CCTTCCT)n	Simple_repeat	1	55	(0)	1005831
18	28.0	0.0	1.6	chr13	28138293	28138354	(86225974)	+	(CCTGCC)n	Simple_repeat	1	62	(0)	1006216
20	11.5	8.2	3.0	chr13	28138450	28138510	(86225818)	+	(CTCCTCC)n	Simple_repeat	1	66	(0)	1006217
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
34	19.3	2.7	0.0	chr13	28450507	28450581	(85913747)	+	G-rich	Low_complexity	1	77	(0)	1006758
426	31.7	11.0	1.6	chr13	28658712	28658900	(85705428)	+	MIRc	SINE/MIR	58	266	(2)	1007119
23	25.9	4.6	0.0	chr13	29850315	29850403	(84513925)	+	(CGCCTC)n	Simple_repeat	1	93	(0)	1008714
18	7.8	0.0	0.0	chr13	29850579	29850605	(84513723)	+	(GGC)n	Simple_repeat	1	27	(0)	1008715
50	10.7	1.2	0.0	chr13	30422289	30422369	(83941959)	+	(GCCCA)n	Simple_repeat	1	82	(0)	1009665
18	27.4	1.3	4.0	chr13	30464650	30464724	(83899604)	+	(CCG)n	Simple_repeat	1	76	(0)	1009735
31	0.0	0.0	0.0	chr13	30464762	30464788	(83899540)	+	(TG)n	Simple_repeat	1	27	(0)	1009736
18	22.8	3.6	0.0	chr13	30464807	30464814	(83899514)	+	(GCGCGG)n	Simple_repeat	1	23	(35)	1009737
14	13.2	0.0	7.7	chr13	30464815	30464853	(83899475)	+	(GCG)n	Simple_repeat	1	39	(0)	1009738
18	22.8	3.6	0.0	chr13	30464854	30464862	(83899466)	+	(GCGCGG)n	Simple_repeat	24	58	(0)	1009737
12	15.5	3.5	0.0	chr13	30464885	30464913	(83899415)	+	G-rich	Low_complexity	1	30	(0)	1009739
15	11.7	0.0	0.0	chr13	30464913	30464940	(83899388)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1009740
15	28.6	1.5	2.9	chr13	30464956	30465022	(83899306)	+	(CCGC)n	Simple_repeat	1	68	(0)	1009741
25	22.6	3.5	2.2	chr13	33350651	33350736	(81013592)	+	(CCTCC)n	Simple_repeat	1	89	(0)	1014177
282	27.7	6.7	8.0	chr13	33933670	33933881	(80430447)	C	Charlie30a	DNA/hAT-Charlie	(1)	790	582	1015062
16	26.4	3.1	3.0	chr13	34750692	34750756	(79613572)	+	GA-rich	Low_complexity	1	67	(0)	1016230
67	0.0	0.0	0.0	chr13	35476297	35476355	(78887973)	+	(CTG)n	Simple_repeat	1	59	(0)	1017168
17	10.5	3.2	0.0	chr13	36131433	36131463	(78232865)	+	(CCT)n	Simple_repeat	1	32	(0)	1018107
272	22.7	0.0	4.3	chr13	36164104	36164172	(78200156)	+	X6B_LINE	LINE/CR1	920	985	(87)	1018152
342	30.5	14.0	1.9	chr13	36211585	36211741	(78152587)	+	MIRb	SINE/MIR	9	187	(81)	1018214
1507	22.5	7.6	2.3	chr13	39274426	39274862	(75089466)	+	LTR40b	LTR/ERVL	1	462	(0)	1022405
495	29.3	7.4	8.7	chr13	39274863	39275196	(75089132)	C	LTR16A1	LTR/ERVL	(70)	386	55	1022406
18	21.6	2.1	0.0	chr13	39603217	39603264	(74761064)	+	(CCTCC)n	Simple_repeat	1	49	(0)	1022860
434	33.2	4.6	4.6	chr13	39670407	39670643	(74693685)	+	MIRb	SINE/MIR	9	245	(23)	1022988
410	25.8	15.9	0.8	chr13	39670665	39670899	(74693429)	+	L4_C_Mam	LINE/RTE-X	4856	5132	(6)	1022989
987	23.3	9.4	0.3	chr13	40134276	40134585	(74229743)	+	L2a	LINE/L2	3073	3413	(13)	1023611
190	27.9	3.7	1.2	chr13	40489670	40489749	(73874579)	C	MIRb	SINE/MIR	(180)	88	7	1024196
12	12.4	5.1	4.9	chr13	40666130	40666168	(73698160)	+	(GGCAGC)n	Simple_repeat	1	41	(0)	1024470
20	6.3	0.0	5.4	chr13	41263790	41263826	(73100502)	+	(GGGA)n	Simple_repeat	1	37	(0)	1025541
635	34.4	10.9	4.1	chr13	41764368	41765240	(72599088)	C	L2b	LINE/L2	(8)	3367	2430	1026328
671	25.5	8.5	3.4	chr13	41992502	41992736	(72371592)	C	MIRc	SINE/MIR	(17)	251	2	1026677
17	23.2	3.8	4.9	chr13	42040494	42040572	(72323756)	+	G-rich	Low_complexity	1	82	(0)	1026755
24	23.4	3.9	1.2	chr13	42272049	42272132	(72092196)	+	(GCG)n	Simple_repeat	1	86	(0)	1027115
4813	10.7	4.4	9.5	chr13	43054751	43055573	(71308755)	+	LTR19C	LTR/ERV1	1	779	(0)	1028336
10189	13.9	5.7	3.4	chr13	43056899	43059152	(71305176)	C	L1PB1	LINE/L1	(4349)	2514	3	1028332
11	23.8	8.5	0.0	chr13	43785834	43785892	(70578436)	+	(GTGGCC)n	Simple_repeat	1	64	(0)	1029331
17	34.5	0.0	0.0	chr13	43786939	43786994	(70577334)	+	(GC)n	Simple_repeat	1	56	(0)	1029335
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
135	28.2	3.1	3.0	chr13	44277111	44277627	(70086701)	+	A-rich	Low_complexity	1	517	(0)	1030034
605	32.3	3.4	8.6	chr13	44277780	44278219	(70086109)	+	L2c	LINE/L2	2972	3387	(0)	1030035
14	15.9	0.0	0.0	chr13	44576554	44576581	(69787747)	+	(CGC)n	Simple_repeat	1	28	(0)	1030514
14	19.0	4.8	0.0	chr13	44576611	44576652	(69787676)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1030515
23	19.9	2.0	8.7	chr13	44577328	44577429	(69786899)	+	GA-rich	Low_complexity	1	104	(0)	1030517
340	29.3	9.1	0.6	chr13	45236228	45236409	(69127919)	+	CR1_Mam	LINE/CR1	1318	1516	(688)	1031850
49	2.2	0.0	0.0	chr13	45236484	45236529	(69127799)	+	(CA)n	Simple_repeat	1	46	(0)	1031851
638	20.4	7.7	11.1	chr13	45374244	45374564	(68989764)	C	MLT1A	LTR/ERVL-MaLR	(60)	348	30	1032172
30	21.0	1.4	0.0	chr13	45538848	45538916	(68825412)	+	(CTCTC)n	Simple_repeat	1	70	(0)	1032476
1774	16.3	1.8	0.4	chr13	45538918	45539193	(68825135)	C	AluJb	SINE/Alu	(32)	280	1	1032477
346	31.9	6.6	2.9	chr13	45781989	45782162	(68582166)	+	Plat_L3	LINE/CR1	3127	3307	(279)	1032822
15	23.1	5.8	2.7	chr13	46553067	46553135	(67811193)	+	GA-rich	Low_complexity	1	73	(0)	1034098
14	0.0	0.0	0.0	chr13	46663336	46663353	(67700975)	+	(TTG)n	Simple_repeat	1	18	(0)	1034270
34	34.3	4.3	2.5	chr13	49113015	49113248	(65251080)	+	(TCTCT)n	Simple_repeat	1	244	(0)	1037862
12	11.1	6.9	0.0	chr13	49586046	49586074	(64778254)	+	(CCTC)n	Simple_repeat	1	31	(0)	1038637
12	20.7	5.1	0.0	chr13	49792354	49792392	(64571936)	+	(CCCGC)n	Simple_repeat	1	41	(0)	1039047
25	19.0	0.0	1.8	chr13	49792507	49792562	(64571766)	+	(GGC)n	Simple_repeat	1	56	(0)	1039048
22	14.9	2.2	0.0	chr13	49792569	49792613	(64571715)	+	G-rich	Low_complexity	1	46	(0)	1039049
13	27.4	0.0	6.2	chr13	49792664	49792727	(64571601)	+	G-rich	Low_complexity	1	64	(0)	1039049
14	14.9	5.4	0.0	chr13	49811353	49811389	(64552939)	+	(GTGAGG)n	Simple_repeat	1	39	(0)	1039096
527	26.0	2.5	0.0	chr13	49811410	49811563	(64552765)	+	Tigger15a	DNA/TcMar-Tigger	448	605	(110)	1039097
446	25.0	5.0	0.8	chr13	49836616	49836748	(64527580)	+	LTR33A_	LTR/ERVL	1	139	(392)	1039146
572	25.3	15.7	0.4	chr13	49836796	49837021	(64527307)	+	LTR33A_	LTR/ERVL	256	522	(9)	1039146
19	18.2	0.0	7.7	chr13	50124589	50124653	(64239675)	+	(CTCCCCC)n	Simple_repeat	1	65	(0)	1039667
3602	12.1	0.2	2.2	chr13	50393414	50393953	(63970375)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1040068
2937	23.4	5.6	3.8	chr13	50393955	50395637	(63968691)	+	L1ME1	LINE/L1	4455	6168	(11)	1040063
463	34.0	4.0	10.2	chr13	50411061	50411433	(63952895)	C	L2b	LINE/L2	(0)	3375	3027	1040094
33	16.2	3.1	0.0	chr13	50522161	50522224	(63842104)	+	GA-rich	Low_complexity	1	66	(0)	1040250
473	28.8	9.5	9.8	chr13	51101634	51101960	(63262368)	C	L2c	LINE/L2	(18)	3369	3044	1041076
25	31.9	0.0	6.5	chr13	51451818	51451970	(62912358)	+	G-rich	Low_complexity	1	153	(0)	1041598
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
13	12.7	0.0	0.0	chr13	51802795	51802820	(62561508)	+	(CTCCC)n	Simple_repeat	1	26	(0)	1042117
864	18.8	5.8	1.8	chr13	51849938	51850102	(62514226)	+	AluJr	SINE/Alu	5	176	(136)	1042198
259	32.5	4.7	5.4	chr13	52372058	52372187	(61992141)	C	HAL1ME	LINE/L1	(37)	2428	2300	1043006
13	22.1	4.1	2.0	chr13	52652663	52652711	(61711617)	+	G-rich	Low_complexity	1	51	(0)	1043445
12	24.9	5.1	4.9	chr13	59963382	59963459	(54400869)	+	(TATAC)n	Simple_repeat	1	82	(0)	1052801
831	16.4	0.8	0.0	chr13	59963736	59963857	(54400471)	C	AluJr	SINE/Alu	(189)	123	1	1052802
4867	9.7	1.8	0.7	chr13	60268007	60268720	(54095608)	C	LTR30	LTR/ERV1	(0)	722	1	1053261
34	17.6	6.6	1.8	chr13	60397601	60397706	(53966622)	+	(GGCGGCG)n	Simple_repeat	1	113	(0)	1053464
16	4.1	0.0	3.7	chr13	66860336	66860362	(47503966)	+	(GGGGA)n	Simple_repeat	1	27	(0)	1061553
2075	16.1	0.3	4.7	chr13	67136022	67136385	(47227943)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	1061903
23	25.0	1.8	0.0	chr13	67230277	67230331	(47133997)	+	(CT)n	Simple_repeat	1	56	(0)	1062005
24	15.2	6.7	0.0	chr13	73433950	73434009	(40930319)	+	GA-rich	Low_complexity	1	64	(0)	1070546
642	28.3	22.0	3.1	chr13	73840360	73841202	(40523126)	+	L2a	LINE/L2	2329	3409	(17)	1071160
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
25	26.4	3.1	2.0	chr13	74134473	74134570	(40229758)	+	(CCCGC)n	Simple_repeat	1	101	(0)	1071558
13	10.8	3.1	3.0	chr13	74575874	74575905	(39788423)	+	(CCGGC)n	Simple_repeat	1	33	(0)	1072129
47	13.8	4.3	4.1	chr13	74727305	74727421	(39636907)	+	A-rich	Low_complexity	1	122	(0)	1072340
63	29.4	4.1	4.5	chr13	74727422	74727542	(39636786)	+	GA-rich	Low_complexity	193	379	(0)	1072339
3173	25.8	7.8	7.3	chr13	75328833	75330346	(39033982)	C	HAL1	LINE/L1	(0)	2507	986	1073153
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
144	15.9	6.8	3.2	chr13	76827898	76828308	(37536020)	+	G-rich	Low_complexity	1	439	(0)	1075293
140	22.6	5.0	2.7	chr13	76828309	76828341	(37535987)	+	GA-rich	Low_complexity	153	484	(0)	1075292
1340	15.7	1.3	2.1	chr13	79393292	79393526	(34970802)	+	MER50	LTR/ERV1	479	711	(23)	1078857
6021	14.9	11.4	0.2	chr13	79393528	79394632	(34969696)	+	MER50-int	LTR/ERV1	1	1231	(5974)	1078857
29	7.8	3.3	4.8	chr13	79560165	79560229	(34804099)	+	(CCCTT)n	Simple_repeat	1	64	(0)	1079132
460	32.9	16.8	3.4	chr13	79989205	79990545	(34373783)	+	L2b	LINE/L2	721	2277	(1142)	1079628
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
16	19.6	6.7	1.6	chr13	80341787	80341846	(34022482)	+	(GGAGCG)n	Simple_repeat	1	64	(0)	1080205
15	25.2	1.3	6.6	chr13	80341847	80341861	(34022467)	+	GA-rich	Low_complexity	1	76	(0)	1080206
18	11.0	2.2	6.4	chr13	86742012	86742057	(27622271)	+	GA-rich	Low_complexity	1	47	(0)	1088117
1225	24.1	6.4	5.2	chr13	93233868	93234391	(21129937)	+	LTR55	LTR/ERVL?	16	546	(2)	1096618
238	30.6	21.9	1.5	chr13	93234394	93234599	(21129729)	C	L2a	LINE/L2	(531)	2888	2629	1096616
19	26.9	1.6	0.0	chr13	94712582	94712643	(19651685)	+	(AGGTGG)n	Simple_repeat	1	63	(0)	1098777
196	21.4	1.8	0.0	chr13	95192036	95192091	(19172237)	C	L2a	LINE/L2	(55)	3371	3315	1099533
2106	23.6	6.6	4.6	chr13	96248085	96248821	(18115507)	+	MERX	DNA/TcMar-Tigger	4	756	(0)	1101332
26	28.2	1.2	0.0	chr13	97976248	97976327	(16388001)	+	(CCCCGA)n	Simple_repeat	1	81	(0)	1103821
998	30.7	8.0	7.7	chr13	98179886	98180072	(16184256)	C	HAL1	LINE/L1	(1958)	549	366	1104247
2093	16.4	8.4	1.5	chr13	98180073	98180468	(16183860)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1104250
998	30.7	8.0	7.7	chr13	98180469	98180807	(16183521)	C	HAL1	LINE/L1	(2142)	365	10	1104247
194	27.5	1.2	1.2	chr13	98187437	98187517	(16176811)	C	L2b	LINE/L2	(243)	3132	3052	1104264
2581	5.4	0.0	0.0	chr13	98431462	98431759	(15932569)	C	AluSg	SINE/Alu	(12)	298	1	1104654
14	19.7	7.7	0.0	chr13	98468481	98468532	(15895796)	+	(GACAGGAG)n	Simple_repeat	1	56	(0)	1104693
243	23.6	6.3	5.3	chr13	99805604	99805697	(14558631)	C	MIR	SINE/MIR	(20)	242	148	1106866
801	28.2	13.8	8.9	chr13	99805729	99806459	(14557869)	C	L1ME4c	LINE/L1	(0)	830	58	1106867
11	15.5	0.0	9.3	chr13	99861067	99861109	(14503219)	+	(CTCCCC)n	Simple_repeat	1	43	(0)	1106956
16	20.9	0.0	0.0	chr13	99905702	99905734	(14458594)	+	(T)n	Simple_repeat	1	33	(0)	1107007
98	30.4	1.4	4.9	chr13	99911008	99911507	(14452821)	+	(CTCTGA)n	Simple_repeat	1	507	(0)	1107021
25	22.4	1.3	3.8	chr13	99981084	99981162	(14383166)	+	(CCTCCC)n	Simple_repeat	1	80	(0)	1107133
11	17.0	2.9	2.8	chr13	99981243	99981277	(14383051)	+	(CGAGGC)n	Simple_repeat	1	36	(0)	1107134
35	13.9	1.6	0.0	chr13	99981789	99981851	(14382477)	+	(CTC)n	Simple_repeat	1	64	(0)	1107139
12	23.4	4.6	4.4	chr13	100089149	100089213	(14275115)	+	(CGCTGG)n	Simple_repeat	1	68	(0)	1107378
16	10.7	0.0	3.1	chr13	102596926	102596957	(11767371)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1111016
10259	16.7	5.3	3.3	chr13	102811823	102813205	(11551123)	C	L1M4c	LINE/L1	(4943)	1907	468	1111309
389	27.9	18.8	3.6	chr13	105969893	105970085	(8394243)	C	MamTip2	DNA/hAT-Tip100	(76)	229	1	1115434
221	26.7	1.6	1.6	chr13	105970299	105970359	(8393969)	+	MER5B	DNA/hAT-Charlie	116	176	(2)	1115435
1167	27.9	9.0	5.8	chr13	106083209	106083834	(8280494)	C	MER20B	DNA/hAT-Charlie	(129)	654	8	1115601
39	16.9	2.7	8.5	chr13	106567412	106567560	(7796768)	+	(CCCGC)n	Simple_repeat	1	153	(0)	1116230
13	22.9	2.3	2.3	chr13	106567593	106567635	(7796693)	+	(CTC)n	Simple_repeat	1	44	(0)	1116231
2359	11.0	0.0	0.0	chr13	108176480	108176788	(6187540)	+	AluSx	SINE/Alu	1	309	(3)	1118411
27	8.8	0.0	0.0	chr13	108176791	108176827	(6187501)	+	(A)n	Simple_repeat	1	37	(0)	1118412
12	22.4	3.1	6.1	chr13	109786754	109786817	(4577511)	+	(CGCCCC)n	Simple_repeat	1	66	(0)	1120506
12	24.2	2.6	0.0	chr13	109786820	109786858	(4577470)	+	G-rich	Low_complexity	1	40	(0)	1120507
23	18.2	4.0	3.9	chr13	109787005	109787078	(4577250)	+	G-rich	Low_complexity	1	77	(0)	1120508
18	16.2	2.3	2.3	chr13	110379911	110379953	(3984375)	+	(CCT)n	Simple_repeat	1	44	(0)	1121202
2256	9.1	1.0	0.3	chr13	110717545	110717841	(3646487)	+	AluSp	SINE/Alu	1	299	(14)	1121638
12	19.5	2.9	0.0	chr13	111050278	111050312	(3314016)	+	G-rich	Low_complexity	1	36	(0)	1122097
27	23.8	3.0	2.9	chr13	111115071	111115135	(3249193)	+	(CGCCCC)n	Simple_repeat	1	100	(0)	1122178
13	7.5	3.1	6.1	chr13	111115136	111115167	(3249161)	+	(CCG)n	Simple_repeat	1	33	(0)	1122179
26	10.9	4.6	4.4	chr13	112072661	112072725	(2291603)	+	(CTCC)n	Simple_repeat	1	68	(0)	1123134
12	15.8	1.6	11.1	chr13	112073528	112073589	(2290739)	+	G-rich	Low_complexity	1	63	(0)	1123135
502	24.8	21.8	2.0	chr13	112586496	112586795	(1777533)	+	L2a	LINE/L2	3009	3384	(42)	1123661
18	16.6	5.2	3.3	chr13	112603829	112603886	(1760442)	+	G-rich	Low_complexity	1	61	(0)	1123681
38	19.0	3.8	5.1	chr13	112894203	112894334	(1469994)	+	(CGCCC)n	Simple_repeat	1	137	(0)	1124019
12	23.4	0.0	7.5	chr13	112943975	112944027	(1420301)	+	G-rich	Low_complexity	1	53	(0)	1124076
13	20.4	2.4	2.3	chr13	112965137	112965178	(1399150)	+	(CCTCC)n	Simple_repeat	1	43	(0)	1124097
556	25.8	5.6	0.0	chr13	113158054	113158204	(1206124)	+	MER58A	DNA/hAT-Charlie	8	167	(57)	1124260
28	25.2	2.2	2.1	chr13	113158216	113158306	(1206022)	+	(CTCC)n	Simple_repeat	1	93	(0)	1124261
225	27.9	1.7	10.6	chr13	113458612	113458707	(905621)	C	L2c	LINE/L2	(1)	3425	3315	1124713
268	23.3	10.4	0.8	chr13	113489458	113489578	(874750)	+	L2	LINE/L2	2073	2206	(1213)	1124761
11	16.9	2.9	2.8	chr13	113490128	113490162	(874166)	+	(ACAGCT)n	Simple_repeat	1	36	(0)	1124762
15	27.3	1.4	4.2	chr13	113490353	113490423	(873905)	+	(CCCCGG)n	Simple_repeat	1	72	(0)	1124763
15	19.3	8.5	0.0	chr13	113491517	113491563	(872765)	+	(CT)n	Simple_repeat	1	51	(0)	1124765
34	3.0	0.0	0.0	chr13	113506547	113506580	(857748)	+	(GT)n	Simple_repeat	1	34	(0)	1124782
15	26.3	5.5	3.1	chr13	113584448	113584538	(779790)	+	(CGCACG)n	Simple_repeat	1	96	(0)	1124892
16	21.4	2.3	0.0	chr13	113584581	113584623	(779705)	+	GA-rich	Low_complexity	1	44	(0)	1124893
331	18.7	2.6	2.5	chr13	113836170	113836951	(527377)	+	GA-rich	Low_complexity	1	802	(0)	1125051
20	5.5	7.9	0.0	chr13	114281896	114281934	(82394)	+	(GAGGG)n	Simple_repeat	1	42	(0)	1125454
222	25.9	6.7	6.7	chr14	20262582	20262701	(86781017)	C	MIR3	SINE/MIR	(87)	121	2	1127752
12	12.6	0.0	3.6	chr14	20262892	20262919	(86780799)	+	G-rich	Low_complexity	1	28	(0)	1127753
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
722	0.0	0.0	0.0	chr14	20610132	20610213	(86433505)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1128337
624	2.7	0.0	0.0	chr14	20613790	20613862	(86429856)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	1128344
14	4.9	0.0	0.0	chr14	20684770	20684790	(86358928)	+	(CTC)n	Simple_repeat	1	21	(0)	1128461
16	19.4	2.4	0.0	chr14	20971438	20971478	(86072240)	+	(CTCC)n	Simple_repeat	1	42	(0)	1128895
20	21.2	3.5	5.7	chr14	21070606	21070690	(85973028)	+	(TCC)n	Simple_repeat	1	88	(0)	1129044
12	8.1	3.6	3.5	chr14	21070690	21070717	(85973001)	+	(CTGTC)n	Simple_repeat	1	29	(0)	1129045
12	16.6	4.5	4.3	chr14	21094270	21094313	(85949405)	+	G-rich	Low_complexity	1	46	(0)	1129073
19	12.8	0.0	0.0	chr14	21098669	21098702	(85945016)	+	(GGAG)n	Simple_repeat	1	34	(0)	1129082
291	19.6	0.0	0.0	chr14	21098728	21098778	(85944940)	C	Plat_L3	LINE/CR1	(23)	3563	3513	1129083
17	4.0	0.0	3.6	chr14	21442837	21442864	(85600854)	+	(AGAA)n	Simple_repeat	1	28	(0)	1129755
317	32.3	6.2	5.3	chr14	21442892	21443100	(85600618)	C	MER102c	DNA/hAT-Charlie	(71)	260	50	1129756
14	25.2	1.8	3.6	chr14	21526253	21526307	(85517411)	+	(CGG)n	Simple_repeat	1	56	(0)	1129925
12	20.6	0.0	11.4	chr14	21526387	21526456	(85517262)	+	G-rich	Low_complexity	1	70	(0)	1129926
408	27.3	13.4	4.7	chr14	21557524	21557692	(85486026)	+	UCON105	Unknown	79	264	(9)	1130008
223	27.7	18.4	3.0	chr14	22559367	22559567	(84484151)	C	MIRc	SINE/MIR	(2)	266	28	1131306
2404	7.8	0.0	0.3	chr14	22559796	22560090	(84483628)	+	AluSx1	SINE/Alu	2	295	(17)	1131307
17	8.8	0.0	9.1	chr14	22872439	22872482	(84171236)	+	(CCCCAG)n	Simple_repeat	1	44	(0)	1131879
17	31.5	1.5	0.0	chr14	23047112	23047176	(83996542)	+	(CCCCTC)n	Simple_repeat	1	66	(0)	1132220
188	16.7	5.9	2.0	chr14	23052743	23052791	(83990927)	+	MamTip2	DNA/hAT-Tip100	174	224	(81)	1132229
13	15.8	4.2	6.0	chr14	23155361	23155408	(83888310)	+	(CCTT)n	Simple_repeat	1	50	(0)	1132376
2080	13.0	0.7	0.0	chr14	23184209	23184508	(83859210)	+	AluJo	SINE/Alu	2	303	(9)	1132425
36	16.6	1.4	0.0	chr14	23306778	23306847	(83736871)	+	(CCCT)n	Simple_repeat	1	71	(0)	1132675
13	20.1	0.0	2.8	chr14	23352904	23352939	(83690779)	+	(TCCCC)n	Simple_repeat	1	36	(0)	1132748
17	13.0	7.4	3.5	chr14	23551167	23551180	(83492538)	+	(CCGTC)n	Simple_repeat	1	32	(26)	1133020
13	18.2	0.0	0.0	chr14	23551181	23551211	(83492507)	+	(CCCCTC)n	Simple_repeat	1	31	(0)	1133021
17	13.0	7.4	3.5	chr14	23551212	23551220	(83492498)	+	(CCGTC)n	Simple_repeat	33	58	(0)	1133020
49	3.0	2.7	4.0	chr14	23551653	23551726	(83491992)	+	(CCT)n	Simple_repeat	1	76	(0)	1133023
14	19.1	3.9	3.8	chr14	24368010	24368060	(82675658)	+	G-rich	Low_complexity	1	53	(0)	1134158
12	14.4	7.5	2.3	chr14	24377897	24377936	(82665782)	+	GA-rich	Low_complexity	1	43	(0)	1134170
1172	27.7	6.8	7.7	chr14	24389033	24389579	(82654139)	C	MLT1H	LTR/ERVL-MaLR	(7)	542	1	1134196
354	27.4	7.2	0.6	chr14	24389596	24389739	(82653979)	+	MER102b	DNA/hAT-Charlie	77	276	(65)	1134197
19	26.1	1.7	0.0	chr14	24430178	24430236	(82613482)	+	(GGCCC)n	Simple_repeat	1	60	(0)	1134255
13	26.5	2.2	0.0	chr14	24442011	24442055	(82601663)	+	GA-rich	Low_complexity	1	46	(0)	1134265
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
21	0.0	3.1	3.0	chr14	28766883	28766914	(78276804)	+	(GCT)n	Simple_repeat	1	33	(0)	1139688
13	35.4	2.1	2.1	chr14	28767705	28767797	(78275921)	+	(GGACGG)n	Simple_repeat	1	95	(0)	1139695
18	16.3	0.0	0.0	chr14	30622341	30622376	(76421342)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	1142089
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
1262	26.5	8.3	0.9	chr14	31927544	31928095	(75115623)	+	L2a	LINE/L2	2813	3426	(0)	1144379
24	7.5	2.1	4.2	chr14	31944377	31944423	(75099295)	+	(CCTCCT)n	Simple_repeat	1	48	(0)	1144417
237	36.6	1.1	3.2	chr14	31951696	31951884	(75091834)	+	L2	LINE/L2	2656	2840	(579)	1144429
17	18.7	1.9	3.8	chr14	32076735	32076786	(74966932)	+	G-rich	Low_complexity	1	53	(0)	1144636
310	29.6	3.4	0.0	chr14	32225143	32225284	(74818434)	C	X6A_LINE	LINE/CR1	(13)	1067	921	1144866
15	25.5	0.0	0.0	chr14	32225344	32225380	(74818338)	+	(TT)n	Simple_repeat	1	37	(0)	1144867
35	0.0	0.0	0.0	chr14	32934320	32934349	(74109369)	+	(GT)n	Simple_repeat	1	30	(0)	1145775
57	5.8	0.0	0.0	chr14	32938453	32938524	(74105194)	+	(GA)n	Simple_repeat	1	72	(0)	1145777
29	20.8	0.0	0.0	chr14	32939624	32939680	(74104038)	+	A-rich	Low_complexity	1	57	(0)	1145783
23	26.6	2.1	3.1	chr14	32939778	32939872	(74103846)	+	G-rich	Low_complexity	1	97	(0)	1145784
474	30.2	4.7	0.0	chr14	34683140	34683301	(72360417)	C	MIRb	SINE/MIR	(36)	232	63	1148414
13	17.6	0.0	2.9	chr14	34873685	34873718	(72170000)	+	(CCCTTC)n	Simple_repeat	1	34	(0)	1148820
13	15.9	0.0	0.0	chr14	34874153	34874180	(72169538)	+	G-rich	Low_complexity	1	28	(0)	1148821
21	6.9	0.0	0.0	chr14	35385690	35385738	(71657980)	+	(AGGG)n	Simple_repeat	1	49	(0)	1149930
12	19.6	2.9	0.0	chr14	36441431	36441465	(70602253)	+	G-rich	Low_complexity	1	36	(0)	1151612
18	8.1	0.0	3.6	chr14	36519724	36519751	(70523967)	+	(AG)n	Simple_repeat	1	28	(0)	1151705
20	17.7	4.3	4.2	chr14	36519819	36519887	(70523831)	+	G-rich	Low_complexity	1	72	(0)	1151706
12	25.3	5.2	1.6	chr14	36662398	36662455	(70381263)	+	A-rich	Low_complexity	1	61	(0)	1151895
769	24.9	4.5	0.0	chr14	49923359	49923547	(57120171)	C	MLT1F	LTR/ERVL-MaLR	(34)	514	317	1168925
32	2.9	0.0	0.0	chr14	49923559	49923593	(57120125)	+	(CCTCCCTT)n	Simple_repeat	1	35	(0)	1168926
13	0.0	5.0	0.0	chr14	49923595	49923614	(57120104)	+	(TTTC)n	Simple_repeat	1	21	(0)	1168927
274	14.6	0.0	0.0	chr14	49923615	49923655	(57120063)	C	MLT1F	LTR/ERVL-MaLR	(177)	392	352	1168928
363	27.3	7.0	9.8	chr14	50062887	50062903	(56980815)	+	L1M5	LINE/L1	4232	4251	(1895)	1169194
1657	18.3	4.6	0.3	chr14	50062904	50063192	(56980526)	+	AluJb	SINE/Alu	1	302	(10)	1169195
599	10.0	0.0	0.0	chr14	50397842	50397931	(56645787)	C	L1MD3	LINE/L1	(2015)	5980	5891	1169910
746	21.1	9.1	1.1	chr14	50397959	50398140	(56645578)	+	MLT1F2	LTR/ERVL-MaLR	363	560	(0)	1169911
337	31.0	4.9	0.0	chr14	51581307	51581422	(55462296)	C	L2c	LINE/L2	(0)	3387	3266	1171685
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
12	28.2	1.5	4.5	chr14	53355698	53355762	(53687956)	+	GA-rich	Low_complexity	1	66	(0)	1174414
39	22.3	3.6	4.2	chr14	53956783	53956921	(53086797)	+	(CTCC)n	Simple_repeat	1	144	(0)	1175257
605	28.7	11.7	0.8	chr14	54370908	54371310	(52672408)	+	L2a	LINE/L2	2939	3370	(5)	1175834
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
186	33.0	4.9	4.9	chr14	55806792	55806893	(51236825)	C	L2b	LINE/L2	(210)	3165	3064	1178352
895	24.3	31.0	1.1	chr14	58238337	58238788	(48804930)	+	MER90a	LTR/ERV1	1	597	(17)	1181894
471	25.6	18.5	3.1	chr14	58238835	58239217	(48804501)	C	L2	LINE/L2	(1475)	1944	1490	1181891
19	16.5	4.4	5.6	chr14	58637753	58637820	(48405898)	+	GA-rich	Low_complexity	1	71	(0)	1182574
35	21.3	5.3	3.6	chr14	60249116	60249248	(46794470)	+	(GCG)n	Simple_repeat	1	140	(0)	1184789
13	20.4	0.0	2.8	chr14	60508875	60508910	(46534808)	+	G-rich	Low_complexity	1	36	(0)	1185110
22	17.3	0.0	0.0	chr14	60646608	60646646	(46397072)	+	A-rich	Low_complexity	1	39	(0)	1185328
12	14.6	0.0	5.9	chr14	60653182	60653215	(46390503)	+	(CCTG)n	Simple_repeat	1	34	(0)	1185331
12	20.4	4.1	3.9	chr14	60721600	60721648	(46322070)	+	G-rich	Low_complexity	1	51	(0)	1185455
19	15.3	0.0	0.0	chr14	60723160	60723197	(46320521)	+	G-rich	Low_complexity	1	38	(0)	1185456
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
702	24.8	12.9	2.8	chr14	60735496	60735711	(46308007)	C	MIR	SINE/MIR	(0)	262	22	1185478
24	16.2	4.1	0.0	chr14	61189503	61189551	(45854167)	+	(TC)n	Simple_repeat	1	51	(0)	1186119
29	20.5	0.0	4.9	chr14	61189576	61189657	(45854061)	+	(TTCC)n	Simple_repeat	1	82	(0)	1186120
16	22.3	0.0	2.3	chr14	61321681	61321724	(45721994)	+	GA-rich	Low_complexity	1	44	(0)	1186349
2223	9.9	0.0	0.3	chr14	61762982	61763290	(45280428)	C	AluSx3	SINE/Alu	(0)	311	1	1187017
16	20.3	3.2	4.7	chr14	61812476	61812537	(45231181)	+	G-rich	Low_complexity	1	64	(0)	1187113
522	18.8	1.4	13.8	chr14	63493312	63493471	(43550247)	C	MER20	DNA/hAT-Charlie	(38)	181	42	1189329
17	4.3	4.2	0.0	chr14	63493484	63493507	(43550211)	+	(GT)n	Simple_repeat	1	25	(0)	1189330
13	9.1	0.0	3.9	chr14	63543158	63543183	(43500535)	+	(GGGA)n	Simple_repeat	1	26	(0)	1189433
21	20.1	3.0	2.9	chr14	64465366	64465431	(42578287)	+	(CCCCG)n	Simple_repeat	1	68	(0)	1191351
4442	7.7	0.9	0.0	chr14	64639096	64639644	(42404074)	C	MER41A	LTR/ERV1	(0)	554	1	1191645
12	18.7	0.0	3.0	chr14	64639700	64639732	(42403986)	+	G-rich	Low_complexity	1	33	(0)	1191646
71	0.0	0.0	0.0	chr14	64704385	64704447	(42339271)	+	(CTCCCTCG)n	Simple_repeat	1	63	(0)	1191799
593	24.0	6.4	3.3	chr14	64914881	64915061	(42128657)	C	MIR3	SINE/MIR	(16)	192	6	1192089
13	14.2	3.2	0.0	chr14	65102374	65102404	(41941314)	+	GA-rich	Low_complexity	1	32	(0)	1192406
27	6.0	0.0	0.0	chr14	65102446	65102480	(41941238)	+	(CACT)n	Simple_repeat	1	35	(0)	1192407
17	0.0	4.2	0.0	chr14	65102481	65102495	(41941223)	+	(CA)n	Simple_repeat	1	16	(0)	1192408
98	17.0	2.4	1.4	chr14	65975946	65976150	(41067568)	+	GA-rich	Low_complexity	1	210	(0)	1193976
408	29.2	6.9	4.7	chr14	66038483	66038694	(41005024)	C	MIRb	SINE/MIR	(47)	221	5	1194054
15	18.6	0.0	8.6	chr14	66508442	66508499	(40535219)	+	(CTCCCGG)n	Simple_repeat	1	58	(0)	1194714
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
189	22.2	4.2	0.0	chr14	67427197	67427241	(39616477)	+	MIRc	SINE/MIR	204	250	(18)	1196034
356	25.6	8.1	0.8	chr14	67599263	67599388	(39444330)	C	MIRc	SINE/MIR	(19)	249	114	1196381
24	6.9	0.0	0.0	chr14	68088590	68088620	(38955098)	+	(GT)n	Simple_repeat	1	31	(0)	1197207
29	20.3	1.6	0.0	chr14	68088620	68088681	(38955037)	+	GA-rich	Low_complexity	1	63	(0)	1197208
506	14.8	0.0	2.4	chr14	68293327	68293409	(38750309)	+	MER63B	DNA/hAT-Blackjack	313	393	(43)	1197492
23	10.5	2.4	0.0	chr14	68763308	68763348	(38280370)	+	(CTCC)n	Simple_repeat	1	42	(0)	1198223
14	12.0	0.0	9.1	chr14	68795281	68795324	(38248394)	+	(CCCCCAC)n	Simple_repeat	1	44	(0)	1198274
14	22.1	2.8	6.8	chr14	68977839	68977910	(38065808)	+	G-rich	Low_complexity	1	74	(0)	1198593
493	25.5	8.1	1.5	chr14	69004631	69004791	(38038927)	+	MLT1B	LTR/ERVL-MaLR	1	172	(202)	1198665
860	21.7	5.0	0.5	chr14	69004904	69005093	(38038625)	+	MLT1B	LTR/ERVL-MaLR	192	390	(0)	1198665
120	26.7	6.7	0.8	chr14	70822242	70822735	(36220983)	+	(CT)n	Simple_repeat	1	527	(0)	1201805
13	11.0	0.0	6.1	chr14	71320402	71320434	(35723284)	+	G-rich	Low_complexity	1	33	(0)	1202618
13	24.5	0.0	2.2	chr14	73058803	73058847	(33984871)	+	G-rich	Low_complexity	1	45	(0)	1205429
565	16.5	0.3	0.0	chr14	73679392	73679491	(33364227)	+	L1M3	LINE/L1	5674	5775	(408)	1206861
15	15.9	7.8	1.8	chr14	73679515	73679565	(33364153)	+	GA-rich	Low_complexity	1	55	(0)	1206862
436	28.7	6.1	10.4	chr14	73712256	73712562	(33331156)	C	Charlie15b	DNA/hAT-Charlie	(551)	510	218	1206928
3849	28.2	1.6	1.1	chr14	73712619	73713668	(33330050)	C	MamGyp-int	LTR/Gypsy	(3972)	1131	76	1206930
1955	13.6	1.7	0.0	chr14	73852826	73853120	(33190598)	C	AluSz6	SINE/Alu	(12)	300	1	1207232
13	7.5	3.1	6.1	chr14	74923441	74923472	(32120246)	+	G-rich	Low_complexity	1	33	(0)	1209402
1697	14.9	0.0	1.2	chr14	75173104	75173352	(31870366)	+	AluJb	SINE/Alu	1	246	(66)	1209866
28	20.2	0.0	1.6	chr14	75173353	75173414	(31870304)	+	GA-rich	Low_complexity	1	62	(0)	1209867
284	36.1	7.2	2.5	chr14	75173420	75173618	(31870100)	+	MER102c	DNA/hAT-Charlie	123	331	(0)	1209868
12	22.6	3.1	6.1	chr14	75428647	75428710	(31615008)	+	(GGTGGA)n	Simple_repeat	1	66	(0)	1210445
13	13.2	0.0	9.8	chr14	75561177	75561217	(31482501)	+	(TCC)n	Simple_repeat	1	41	(0)	1210710
332	24.7	12.8	6.8	chr14	75661899	75662059	(31381659)	+	L1ME4a	LINE/L1	5950	6121	(3)	1210881
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
16	27.2	4.5	5.1	chr14	76720585	76720696	(30323022)	+	G-rich	Low_complexity	1	117	(0)	1212836
246	30.4	6.2	7.4	chr14	76919602	76919779	(30123939)	C	MIR3	SINE/MIR	(79)	189	3	1213202
19	17.2	0.0	0.0	chr14	76919829	76919861	(30123857)	+	A-rich	Low_complexity	1	33	(0)	1213203
14	24.1	2.1	2.1	chr14	76919936	76919982	(30123736)	+	(GCG)n	Simple_repeat	1	48	(0)	1213204
26	27.6	4.9	1.6	chr14	76922647	76922768	(30120950)	+	(TCTCTC)n	Simple_repeat	1	128	(0)	1213211
30	19.8	5.5	6.5	chr14	76922873	76923018	(30120700)	+	(TCCTC)n	Simple_repeat	1	154	(0)	1213212
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
14	20.1	2.0	4.0	chr14	76956446	76956494	(30087224)	+	(CCCCT)n	Simple_repeat	1	50	(0)	1213290
12	22.2	6.4	0.0	chr14	76956643	76956689	(30087029)	+	(GCCGGCC)n	Simple_repeat	1	50	(0)	1213291
17	17.2	2.6	0.0	chr14	77000565	77000603	(30043115)	+	(CCTC)n	Simple_repeat	1	40	(0)	1213410
12	8.0	0.0	9.4	chr14	77028867	77028898	(30014820)	+	(CCCCT)n	Simple_repeat	1	32	(0)	1213467
31	0.0	0.0	0.0	chr14	77038790	77038816	(30004902)	+	(GT)n	Simple_repeat	1	27	(0)	1213489
17	14.7	0.0	0.0	chr14	77038817	77038840	(30004878)	+	(GC)n	Simple_repeat	1	24	(0)	1213490
12	26.8	3.8	1.8	chr14	77038933	77038985	(30004733)	+	G-rich	Low_complexity	1	55	(0)	1213491
14	16.9	3.9	5.6	chr14	81324068	81324119	(25719599)	+	G-rich	Low_complexity	1	54	(0)	1220456
12	9.1	4.2	0.0	chr14	81324149	81324172	(25719546)	+	(CTGC)n	Simple_repeat	1	25	(0)	1220457
29	0.0	0.0	3.1	chr14	81436222	81436253	(25607465)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	1220623
3193	22.1	7.0	4.4	chr14	81517025	81517892	(25525826)	+	MER68-int	LTR/ERVL	8	899	(2091)	1220755
11	18.1	2.4	4.8	chr14	88245199	88245239	(18798479)	+	A-rich	Low_complexity	1	42	(0)	1230128
1591	15.1	0.4	2.3	chr14	89285864	89286122	(17757596)	C	AluJo	SINE/Alu	(10)	302	49	1231797
20	18.1	3.2	4.6	chr14	89286158	89286220	(17757498)	+	GA-rich	Low_complexity	1	65	(0)	1231798
2725	16.8	5.0	5.8	chr14	89298012	89298415	(17745303)	+	L1MB3	LINE/L1	5706	6131	(52)	1231814
24	15.7	0.0	6.2	chr14	89417243	89417319	(17626399)	+	GA-rich	Low_complexity	1	72	(0)	1232039
28	24.0	1.6	4.2	chr14	90300854	90300965	(16742753)	+	G-rich	Low_complexity	1	109	(0)	1233627
2191	11.9	0.0	0.3	chr14	90345542	90345851	(16697867)	C	AluY	SINE/Alu	(2)	309	1	1233725
17	18.2	0.0	0.0	chr14	90397627	90397657	(16646061)	+	(C)n	Simple_repeat	1	31	(0)	1233837
210	15.3	21.7	0.0	chr14	90999448	90999519	(16044199)	C	OldhAT1	DNA/hAT-Ac	(846)	2002	1911	1234821
811	23.7	0.6	0.0	chr14	90999661	90999829	(16043889)	C	MER45A	DNA/hAT-Tip100	(8)	170	1	1234822
541	21.7	8.5	1.2	chr14	91377822	91377984	(15665734)	C	MLT1J	LTR/ERVL-MaLR	(224)	288	113	1235595
20	15.7	1.9	3.7	chr14	91417700	91417752	(15625966)	+	(GCGCCCC)n	Simple_repeat	1	54	(0)	1235654
239	25.9	0.0	0.0	chr14	92748911	92748964	(14294754)	C	MER5B	DNA/hAT-Charlie	(10)	168	115	1238155
177	22.9	3.0	4.2	chr14	95137018	95137593	(11906125)	+	A-rich	Low_complexity	1	593	(0)	1242484
1640	29.2	3.6	9.8	chr14	95304360	95305077	(11738641)	+	HAL1	LINE/L1	219	895	(1612)	1242759
270	27.7	3.8	5.6	chr14	95329022	95329128	(11714590)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	445	1242790
15	4.1	4.0	0.0	chr14	95876226	95876250	(11167468)	+	(CCCCT)n	Simple_repeat	1	26	(0)	1243876
37	0.0	0.0	4.7	chr14	96100459	96100501	(10943217)	+	(CCCTCCT)n	Simple_repeat	1	43	(0)	1244242
14	3.6	10.3	0.0	chr14	96307675	96307703	(10736015)	+	(AGGGGA)n	Simple_repeat	1	32	(0)	1244650
15	26.6	3.7	0.0	chr14	96502534	96502587	(10541131)	+	(GGC)n	Simple_repeat	1	56	(0)	1245031
664	22.3	2.8	17.2	chr14	96673388	96673642	(10370076)	+	MER20	DNA/hAT-Charlie	3	219	(0)	1245294
482	20.1	8.1	11.2	chr14	96673643	96673763	(10369955)	+	MIR3	SINE/MIR	98	203	(5)	1245293
16	14.3	0.0	6.8	chr14	96797485	96797530	(10246188)	+	G-rich	Low_complexity	1	42	(0)	1245551
1591	17.0	13.1	4.2	chr14	97022765	97023188	(10020530)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1245930
210	17.6	7.5	0.0	chr14	99253539	99253617	(7790101)	C	MIRb	SINE/MIR	(125)	143	51	1249731
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
17	14.5	2.5	2.4	chr14	99522476	99522515	(7521203)	+	(TGAA)n	Simple_repeat	1	41	(0)	1250148
16	10.0	0.0	5.6	chr14	99524281	99524316	(7519402)	+	(CTGCC)n	Simple_repeat	1	36	(0)	1250150
209	37.6	8.2	0.5	chr14	99595722	99595911	(7447807)	+	MIRb	SINE/MIR	30	235	(33)	1250246
15	17.6	0.0	4.8	chr14	99604696	99604737	(7438981)	+	(CCCCGT)n	Simple_repeat	1	42	(0)	1250259
758	27.8	15.5	0.4	chr14	99605510	99606066	(7437652)	C	L2a	LINE/L2	(3)	3423	2759	1250261
204	33.3	0.0	0.0	chr14	99661115	99661183	(7382535)	C	MIR3	SINE/MIR	(31)	177	109	1250385
2273	23.5	9.2	3.1	chr14	99972693	99973462	(7070256)	C	L1ME3B	LINE/L1	(111)	6131	5310	1250932
248	27.3	0.0	3.8	chr14	100155176	100155255	(6888463)	+	Tigger16a	DNA/TcMar-Tigger	126	202	(755)	1251289
184	28.6	5.0	4.3	chr14	100212939	100213077	(6830641)	C	L2c	LINE/L2	(230)	3157	3018	1251444
12	16.6	0.0	0.0	chr14	100213199	100213225	(6830493)	+	G-rich	Low_complexity	1	27	(0)	1251445
1032	21.9	5.8	2.8	chr14	100213305	100213530	(6830188)	+	Charlie4a	DNA/hAT-Charlie	140	363	(145)	1251446
427	29.8	11.8	2.6	chr14	100221769	100222210	(6821508)	C	L2c	LINE/L2	(97)	3290	2803	1251465
33	22.3	5.6	2.3	chr14	100239072	100239196	(6804522)	+	(CCCG)n	Simple_repeat	1	132	(0)	1251502
19	29.6	0.0	0.0	chr14	100239373	100239449	(6804269)	+	(CGACGG)n	Simple_repeat	1	77	(0)	1251503
33	2.9	0.0	0.0	chr14	100239451	100239485	(6804233)	+	(CCA)n	Simple_repeat	1	35	(0)	1251504
32	17.2	3.3	4.2	chr14	100240046	100240137	(6803581)	+	(GGC)n	Simple_repeat	1	95	(0)	1251506
21	8.9	1.8	8.6	chr14	100306609	100306665	(6737053)	+	G-rich	Low_complexity	1	58	(0)	1251631
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
242	27.9	14.9	4.6	chr14	100403432	100403604	(6640114)	+	MIRb	SINE/MIR	41	234	(34)	1251801
916	29.5	21.4	1.8	chr14	100557637	100558716	(6485002)	+	L2	LINE/L2	1240	2588	(831)	1252050
2188	21.4	20.3	0.7	chr14	100645427	100646041	(6397677)	C	LTR41	LTR/ERVL	(0)	768	2	1252207
13	18.9	0.0	0.0	chr14	101477120	101477149	(5566569)	+	(GGCAG)n	Simple_repeat	1	30	(0)	1253194
1236	18.4	2.0	0.0	chr14	101828162	101828400	(5215318)	+	L1MB5	LINE/L1	5914	6157	(17)	1253714
14	14.9	5.4	0.0	chr14	102086933	102086969	(4956749)	+	(CCCCAGT)n	Simple_repeat	1	39	(0)	1254193
443	27.7	19.3	0.2	chr14	102314496	102314893	(4728825)	C	L2a	LINE/L2	(5)	3421	2930	1254648
560	20.3	2.7	2.0	chr14	102314947	102315092	(4728626)	C	MER53	DNA/hAT	(45)	148	2	1254649
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
1069	33.3	7.7	1.6	chr14	102622317	102622877	(4420841)	+	L2a	LINE/L2	88	685	(2734)	1255345
1059	16.9	5.0	17.8	chr14	102639263	102639482	(4404236)	C	AluJb	SINE/Alu	(10)	302	132	1255392
13	24.0	4.8	0.0	chr14	102775020	102775061	(4268657)	+	GA-rich	Low_complexity	1	44	(0)	1255664
230	29.8	10.7	5.3	chr14	102832958	102833084	(4210634)	+	L2c	LINE/L2	3095	3242	(145)	1255785
16	17.6	0.0	2.9	chr14	102833085	102833118	(4210600)	+	(CA)n	Simple_repeat	1	34	(0)	1255786
230	29.8	10.7	5.3	chr14	102833119	102833240	(4210478)	+	L2c	LINE/L2	3243	3387	(0)	1255785
30	5.6	0.0	0.0	chr14	102928683	102928720	(4114998)	+	(GCGTG)n	Simple_repeat	1	38	(0)	1255915
492	28.5	6.5	10.7	chr14	103046159	103046661	(3997057)	+	HAL1	LINE/L1	578	1057	(1450)	1256098
2743	11.6	0.0	0.0	chr14	103260665	103261052	(3782666)	+	HERVL66-int	LTR/ERVL	29	416	(3913)	1256451
787	29.0	9.5	4.5	chr14	103409603	103410110	(3633608)	C	L1ME3G	LINE/L1	(297)	627	203	1256769
873	22.4	19.8	1.2	chr14	103410111	103410431	(3633287)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	1256770
713	29.2	13.1	6.4	chr14	103418081	103418552	(3625166)	C	HAL1	LINE/L1	(1418)	1089	632	1256783
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
784	11.9	1.5	3.7	chr14	103528850	103528983	(3514735)	C	AluJo	SINE/Alu	(181)	131	1	1256995
15	22.5	1.8	3.6	chr14	103529138	103529192	(3514526)	+	(GGCGGA)n	Simple_repeat	1	56	(0)	1256996
372	33.8	10.1	1.7	chr14	103626262	103626607	(3417111)	C	L2b	LINE/L2	(49)	3326	2949	1257192
229	27.7	6.0	4.7	chr14	104138112	104138259	(2905459)	+	MIR3	SINE/MIR	4	153	(55)	1258137
36	21.7	4.8	0.9	chr14	104276662	104276728	(2766990)	+	(TTCCT)n	Simple_repeat	1	95	(14)	1258255
15	21.1	0.0	0.0	chr14	104276729	104276757	(2766961)	+	(C)n	Simple_repeat	1	29	(0)	1258256
36	21.7	4.8	0.9	chr14	104276758	104276765	(2766953)	+	(TTCCT)n	Simple_repeat	96	109	(0)	1258255
45	2.2	0.0	0.0	chr14	104276766	104276811	(2766907)	+	(TCCT)n	Simple_repeat	1	46	(0)	1258257
19	15.6	4.8	4.5	chr14	104650446	104650463	(2393255)	+	(CCCTCC)n	Simple_repeat	5	66	(0)	1258649
22	16.2	2.0	2.0	chr14	104677815	104677864	(2365854)	+	(CCT)n	Simple_repeat	1	51	(0)	1258705
13	26.6	2.9	4.3	chr14	104753024	104753091	(2290627)	+	(CCGCG)n	Simple_repeat	1	70	(0)	1258777
17	15.1	4.3	2.1	chr14	104827819	104827864	(2215854)	+	G-rich	Low_complexity	1	48	(0)	1258878
12	20.3	6.7	0.0	chr14	104865760	104865804	(2177914)	+	(CCCCGG)n	Simple_repeat	1	48	(0)	1258950
17	18.7	1.4	9.5	chr14	104865851	104865923	(2177795)	+	(CCT)n	Simple_repeat	1	74	(0)	1258951
12	26.4	3.8	4.9	chr14	104933598	104933676	(2110042)	+	(GGACAGG)n	Simple_repeat	1	82	(0)	1259013
224	26.0	13.3	1.9	chr14	105088684	105088789	(1954929)	+	MIR	SINE/MIR	87	206	(56)	1259228
13	18.2	6.6	4.6	chr14	105093885	105093945	(1949773)	+	G-rich	Low_complexity	1	65	(0)	1259236
12	20.1	4.7	6.0	chr14	105094007	105094070	(1949648)	+	(CGGAGC)n	Simple_repeat	1	67	(0)	1259237
14	12.7	0.0	0.0	chr14	105184756	105184781	(1858937)	+	(AGG)n	Simple_repeat	1	26	(0)	1259365
1150	23.9	10.4	0.8	chr14	105307209	105307583	(1736135)	+	MER74A	LTR/ERVL	126	540	(18)	1259515
373	28.9	0.2	1.0	chr14	105307630	105307759	(1735959)	+	MIRc	SINE/MIR	40	166	(102)	1259516
996	18.4	2.5	1.7	chr14	105410381	105410617	(1633101)	C	L1MB3	LINE/L1	(358)	5825	5587	1259651
13	0.0	5.0	0.0	chr15	22845684	22845703	(79145486)	+	(AGG)n	Simple_repeat	1	21	(0)	1266416
238	13.2	5.4	1.9	chr15	22845825	22845878	(79145311)	+	L1MC5	LINE/L1	9249	9304	(0)	1266417
442	29.7	3.0	0.0	chr15	26051945	26052072	(75939117)	C	MIR	SINE/MIR	(43)	219	88	1270951
41	21.6	0.8	5.3	chr15	26773072	26773201	(75217988)	+	G-rich	Low_complexity	1	131	(0)	1271880
25	24.0	0.0	1.4	chr15	33310891	33310960	(68680229)	+	GA-rich	Low_complexity	1	70	(0)	1281194
20	27.3	2.2	4.4	chr15	36598664	36598752	(65392437)	+	(CCTT)n	Simple_repeat	1	91	(0)	1285909
28	5.8	0.0	0.0	chr15	36598807	36598842	(65392347)	+	(GTTT)n	Simple_repeat	1	36	(0)	1285910
11	24.9	2.6	0.0	chr15	36885101	36885139	(65106050)	+	(CCTCCCT)n	Simple_repeat	1	40	(0)	1286250
12	21.5	2.1	4.2	chr15	37098212	37098258	(64892931)	+	G-rich	Low_complexity	1	48	(0)	1286502
44	6.1	4.4	0.0	chr15	37099691	37099758	(64891431)	+	(TCC)n	Simple_repeat	1	71	(0)	1286508
24	19.1	0.0	0.0	chr15	37099805	37099848	(64891341)	+	A-rich	Low_complexity	1	44	(0)	1286509
33	14.5	0.0	0.0	chr15	37100691	37100744	(64890445)	+	(GT)n	Simple_repeat	1	54	(0)	1286512
18	17.3	0.0	2.8	chr15	37100727	37100762	(64890427)	+	(GC)n	Simple_repeat	1	36	(0)	1286513
23	17.4	4.9	1.9	chr15	37100766	37100818	(64890371)	+	GA-rich	Low_complexity	1	54	(0)	1286514
12	8.9	4.2	0.0	chr15	37102047	37102070	(64889119)	+	(GGAG)n	Simple_repeat	1	25	(0)	1286517
16	3.8	0.0	6.5	chr15	37102776	37102806	(64888383)	+	(AAAAG)n	Simple_repeat	1	31	(0)	1286520
66	3.0	1.4	0.0	chr15	37111300	37111368	(64879821)	+	(TC)n	Simple_repeat	1	70	(0)	1286532
14	19.8	2.4	2.3	chr15	38253072	38253113	(63738076)	+	(GCC)n	Simple_repeat	1	43	(0)	1288015
13	30.9	0.0	3.4	chr15	38253095	38253153	(63738036)	+	(GCT)n	Simple_repeat	1	59	(0)	1288016
436	27.5	6.1	2.1	chr15	39938107	39938247	(62052942)	+	L2b	LINE/L2	3212	3358	(17)	1290427
611	29.8	10.4	2.2	chr15	39938306	39938621	(62052568)	+	L4_B_Mam	LINE/RTE-X	4416	4760	(181)	1290428
170	19.5	7.2	1.1	chr15	40050510	40051022	(61940167)	+	(TG)n	Simple_repeat	1	550	(0)	1290591
179	16.5	6.6	3.3	chr15	40051023	40051049	(61940140)	+	(GTGGTGT)n	Simple_repeat	3	578	(0)	1290592
12	22.6	5.7	1.8	chr15	40089177	40089229	(61901960)	+	(TGGAGG)n	Simple_repeat	1	56	(0)	1290668
33	7.5	0.0	0.0	chr15	40092435	40092476	(61898713)	+	(AC)n	Simple_repeat	1	42	(0)	1290671
241	25.4	20.8	0.0	chr15	40288320	40288441	(61702748)	C	MIR3	SINE/MIR	(40)	168	15	1290970
448	23.8	5.2	2.6	chr15	40338045	40338198	(61652991)	+	MIR	SINE/MIR	70	235	(33)	1291026
574	20.1	3.1	5.2	chr15	40795131	40795264	(61195925)	+	FLAM_C	SINE/Alu	2	132	(11)	1291933
18	20.6	0.0	4.0	chr15	40795265	40795314	(61195875)	+	GA-rich	Low_complexity	1	50	(0)	1291934
275	23.3	3.9	18.9	chr15	40795426	40795515	(61195674)	+	L2b	LINE/L2	3296	3384	(3)	1291935
18	17.8	0.0	0.0	chr15	40807703	40807740	(61183449)	+	G-rich	Low_complexity	1	38	(0)	1291968
13	23.3	0.0	0.0	chr15	40937357	40937391	(61053798)	+	(CCTC)n	Simple_repeat	1	35	(0)	1292220
1692	19.6	4.5	2.8	chr15	40972193	40972607	(61018582)	C	MLT2B4	LTR/ERVL	(4)	410	20	1292280
23	18.4	2.0	0.0	chr15	41116161	41116210	(60874979)	+	(GGC)n	Simple_repeat	1	51	(0)	1292535
924	18.6	9.2	1.6	chr15	41188098	41188288	(60802901)	C	MER58C	DNA/hAT-Charlie	(8)	207	1	1292724
30	16.0	4.8	3.4	chr15	41188300	41188383	(60802806)	+	(CCCTC)n	Simple_repeat	1	88	(0)	1292725
2149	13.1	0.7	0.0	chr15	41188387	41188691	(60802498)	C	AluSq2	SINE/Alu	(6)	307	1	1292726
14	13.1	0.0	0.0	chr15	41231305	41231330	(60759859)	+	(CCCT)n	Simple_repeat	1	26	(0)	1292845
17	17.8	1.7	6.8	chr15	41559164	41559221	(60431968)	+	(CCT)n	Simple_repeat	1	59	(0)	1293645
19	7.2	0.0	0.0	chr15	41564509	41564537	(60426652)	+	(GGGA)n	Simple_repeat	1	29	(0)	1293653
531	25.1	14.7	3.4	chr15	41567761	41568003	(60423186)	C	L2a	LINE/L2	(261)	3165	2907	1293652
2181	8.2	0.7	2.0	chr15	41827014	41827317	(60163872)	+	AluSx1	SINE/Alu	1	300	(12)	1294146
615	24.1	6.5	2.5	chr15	41865325	41865597	(60125592)	C	L1MC4a	LINE/L1	(1)	7881	7675	1294174
11	28.4	0.0	0.0	chr15	43518552	43518590	(58472599)	+	(GCTGGA)n	Simple_repeat	1	39	(0)	1297154
187	29.9	10.7	0.0	chr15	48884644	48884710	(53106479)	+	L3	LINE/CR1	4014	4088	(11)	1305468
332	30.9	7.9	7.9	chr15	48884882	48885071	(53106118)	+	MamTip2	DNA/hAT-Tip100	107	296	(9)	1305469
369	19.3	2.2	2.2	chr15	50465372	50465461	(51525728)	C	LTR9D	LTR/ERV1	(88)	557	468	1307826
696	27.3	5.4	2.9	chr15	50687614	50687919	(51303270)	C	L1ME1	LINE/L1	(0)	6179	5866	1308296
16	15.5	2.8	0.0	chr15	50765403	50765438	(51225751)	+	(GCCCCG)n	Simple_repeat	1	37	(0)	1308471
2642	22.6	11.3	3.8	chr15	51268100	51269508	(50721681)	C	L1ME1	LINE/L1	(4)	6330	4662	1309311
13	30.4	4.4	0.0	chr15	51622857	51622924	(50368265)	+	(GAGC)n	Simple_repeat	1	71	(0)	1309765
14	23.8	2.8	5.5	chr15	52295645	52295715	(49695474)	+	G-rich	Low_complexity	1	73	(0)	1311056
70	2.4	3.5	1.1	chr15	52679756	52679841	(49311348)	+	(CTC)n	Simple_repeat	1	89	(0)	1311701
188	31.9	10.1	6.2	chr15	55687925	55688248	(46302941)	+	L2	LINE/L2	1647	1984	(1435)	1315997
372	29.9	16.7	5.1	chr15	55688253	55688554	(46302635)	+	L2	LINE/L2	2125	2435	(984)	1315997
85	19.2	3.4	4.8	chr15	55738717	55738980	(46252209)	+	GA-rich	Low_complexity	1	273	(0)	1316086
21	33.6	1.9	3.6	chr15	55799152	55799259	(46191930)	+	(CTCC)n	Simple_repeat	1	110	(0)	1316223
30	15.3	1.7	0.0	chr15	55993613	55993670	(45997519)	+	GA-rich	Low_complexity	1	59	(0)	1316534
35	9.7	5.8	1.4	chr15	56243300	56243421	(45747768)	+	GA-rich	Low_complexity	1	127	(0)	1316884
237	30.1	4.1	3.5	chr15	56244407	56244575	(45746614)	+	L2	LINE/L2	2897	3066	(353)	1316887
456	21.6	12.4	0.6	chr15	56737631	56737793	(45253396)	+	MER34A	LTR/ERV1	387	571	(0)	1317513
69	33.1	1.9	4.6	chr15	57373997	57374356	(44616833)	+	(CCCT)n	Simple_repeat	1	367	(0)	1318597
14	30.1	2.4	4.7	chr15	58749733	58749815	(43241374)	+	(CCTT)n	Simple_repeat	1	85	(0)	1320717
13	5.3	0.0	0.0	chr15	58772051	58772070	(43219119)	+	(AGG)n	Simple_repeat	1	20	(0)	1320769
28	13.3	0.0	6.2	chr15	58987700	58987764	(43003425)	+	(GGC)n	Simple_repeat	1	65	(0)	1321239
3503	24.9	14.2	2.9	chr15	59654991	59656612	(42334577)	+	L2a	LINE/L2	1584	3425	(1)	1322534
14	4.5	0.0	4.0	chr15	59997380	59997404	(41993785)	+	(CTTT)n	Simple_repeat	1	25	(0)	1323095
33	17.9	0.0	0.0	chr15	59997468	59997526	(41993663)	+	GA-rich	Low_complexity	1	59	(0)	1323096
16	25.4	1.7	3.3	chr15	60004161	60004220	(41986969)	+	(CCT)n	Simple_repeat	1	61	(0)	1323102
943	24.9	4.4	0.0	chr15	60026031	60026247	(41964942)	C	MIR	SINE/MIR	(24)	238	12	1323128
331	28.6	1.6	0.9	chr15	60391134	60391257	(41599932)	C	MIRc	SINE/MIR	(101)	129	1	1323695
531	24.6	3.3	4.4	chr15	60479377	60479559	(41511630)	+	MIR	SINE/MIR	72	252	(10)	1323869
1334	21.6	4.4	8.2	chr15	62457077	62457454	(39533735)	C	MLT1A	LTR/ERVL-MaLR	(11)	363	1	1326941
20	11.6	0.0	8.9	chr15	63042597	63042652	(38948537)	+	G-rich	Low_complexity	1	56	(0)	1327869
23	15.4	0.0	2.1	chr15	63213032	63213078	(38778111)	+	(TCCC)n	Simple_repeat	1	47	(0)	1328173
538	26.7	1.2	7.3	chr15	63277932	63278109	(38713080)	+	Charlie4z	DNA/hAT-Charlie	1	167	(0)	1328276
12	19.1	7.0	3.3	chr15	64050599	64050655	(37940534)	+	G-rich	Low_complexity	1	61	(0)	1329657
1825	15.6	0.4	0.0	chr15	64067814	64068088	(37923101)	C	AluJo	SINE/Alu	(36)	276	1	1329702
4487	9.8	1.4	0.6	chr15	64096864	64097498	(37893691)	C	MER51C	LTR/ERV1	(0)	640	1	1329772
252	25.9	5.6	5.6	chr15	64739662	64739751	(37251438)	+	MIR3	SINE/MIR	90	179	(29)	1331089
13	16.6	2.2	6.4	chr15	64841566	64841611	(37149578)	+	(CGCCC)n	Simple_repeat	1	47	(0)	1331337
35	23.0	0.0	5.9	chr15	64841761	64841881	(37149308)	+	(CCCCGC)n	Simple_repeat	1	113	(0)	1331338
17	4.3	0.0	0.0	chr15	64990092	64990115	(37001074)	+	(AGG)n	Simple_repeat	1	24	(0)	1331656
1219	23.8	18.7	0.6	chr15	65082506	65083067	(36908122)	+	L2a	LINE/L2	2745	3418	(8)	1331848
13	26.2	3.7	5.9	chr15	65377693	65377700	(36613489)	+	(CGG)n	Simple_repeat	1	12	(73)	1332490
20	10.1	0.0	0.0	chr15	65377701	65377732	(36613457)	+	(GCA)n	Simple_repeat	1	32	(0)	1332491
13	26.2	3.7	5.9	chr15	65377733	65377774	(36613415)	+	(CGG)n	Simple_repeat	13	85	(0)	1332490
273	23.2	9.2	3.9	chr15	65509471	65509573	(36481616)	C	CR1_Mam	LINE/CR1	(368)	1836	1728	1332798
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
2029	21.8	6.6	2.7	chr15	65533131	65533682	(36457507)	C	MER90	LTR/ERV1	(0)	575	1	1332850
17	24.9	2.0	0.0	chr15	65638801	65638850	(36352339)	+	G-rich	Low_complexity	1	51	(0)	1333046
287	27.5	1.2	2.4	chr15	65757311	65757392	(36233797)	+	SVA_A	Retroposon/SVA	128	208	(1179)	1333264
1172	29.4	8.8	2.8	chr15	65757415	65757700	(36233489)	+	L1MEd	LINE/L1	271	576	(6510)	1333262
12	12.2	3.7	0.0	chr15	66387261	66387287	(35603902)	+	(GCGCA)n	Simple_repeat	1	28	(0)	1334598
139	25.6	2.7	2.6	chr15	66586863	66586887	(35404302)	+	(TCTCCT)n	Simple_repeat	1	453	(0)	1335009
69	37.3	2.9	3.0	chr15	66586888	66587303	(35403886)	+	(TTC)n	Simple_repeat	1	428	(0)	1335010
14	23.8	1.7	4.9	chr15	66701080	66701139	(35290050)	+	G-rich	Low_complexity	1	61	(0)	1335295
241	28.2	5.0	0.8	chr15	66726003	66726120	(35265069)	+	MIRc	SINE/MIR	59	181	(27)	1335337
635	31.1	1.3	2.2	chr15	66740905	66741134	(35250055)	+	Eulor10	DNA?	80	307	(13)	1335369
255	22.7	6.2	0.3	chr15	66741422	66741496	(35249693)	+	MIR3	SINE/MIR	77	152	(78)	1335370
264	32.4	8.7	5.3	chr15	66747119	66747307	(35243882)	C	MIRc	SINE/MIR	(61)	207	12	1335382
12	10.3	6.1	2.9	chr15	66766185	66766217	(35224972)	+	G-rich	Low_complexity	1	35	(0)	1335414
1304	28.4	2.8	3.2	chr15	66774644	66774833	(35216356)	C	L1ME2	LINE/L1	(2)	6162	5978	1335425
197	27.2	4.7	1.5	chr15	66775443	66775554	(35215635)	C	MIR3	SINE/MIR	(32)	198	82	1335428
717	27.5	14.8	3.8	chr15	66798858	66799631	(35191558)	+	L1ME4a	LINE/L1	4964	5850	(274)	1335474
588	34.6	6.3	2.1	chr15	66841913	66842248	(35148941)	+	L2b	LINE/L2	3024	3374	(1)	1335563
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
198	11.4	0.0	2.8	chr15	66851714	66851749	(35139440)	C	L2	LINE/L2	(774)	2645	2611	1335581
246	33.1	2.0	2.5	chr15	66882430	66882556	(35108633)	C	MIR3	SINE/MIR	(137)	131	2	1335649
242	34.2	6.9	1.5	chr15	67030345	67030549	(34960640)	+	MamRep434	DNA/TcMar-Tigger	181	397	(29)	1335927
188	12.5	0.0	3.0	chr15	67067831	67067863	(34923326)	+	MIR3	SINE/MIR	39	70	(138)	1336016
11	16.4	5.9	0.0	chr15	67138290	67138323	(34852866)	+	(GCTCTGG)n	Simple_repeat	1	36	(0)	1336139
12	11.2	3.2	3.1	chr15	67543183	67543213	(34447976)	+	(CCCCTC)n	Simple_repeat	1	32	(0)	1336781
521	29.1	7.9	0.6	chr15	67736876	67737051	(34254138)	C	MIR3	SINE/MIR	(3)	205	16	1337077
2052	13.0	3.0	0.0	chr15	67811598	67811890	(34179299)	+	AluJb	SINE/Alu	1	302	(10)	1337166
16	19.2	0.0	9.4	chr15	67823594	67823657	(34167532)	+	(CCG)n	Simple_repeat	1	64	(0)	1337184
14	11.8	4.9	4.7	chr15	67843726	67843766	(34147423)	+	GA-rich	Low_complexity	1	43	(0)	1337211
474	27.3	2.0	6.0	chr15	67884427	67884641	(34106548)	C	MIR	SINE/MIR	(51)	211	4	1337305
12	10.4	6.1	2.9	chr15	67884872	67884904	(34106285)	+	(CCCG)n	Simple_repeat	1	35	(0)	1337306
13	13.1	0.0	7.7	chr15	67968242	67968280	(34022909)	+	(CAGAGG)n	Simple_repeat	1	39	(0)	1337479
849	31.0	11.5	5.7	chr15	68020103	68020712	(33970477)	C	MamGypLTR1c	LTR/Gypsy	(141)	662	13	1337595
921	15.7	3.1	1.6	chr15	68199814	68200001	(33791188)	+	MER53	DNA/hAT	2	192	(1)	1337895
30	11.3	5.6	2.7	chr15	68200002	68200045	(33791144)	+	(CTCC)n	Simple_repeat	2	49	(0)	1337896
186	22.2	11.8	0.0	chr15	68200158	68200202	(33790987)	+	MIRb	SINE/MIR	135	185	(83)	1337897
455	30.7	6.2	7.9	chr15	68280295	68280609	(33710580)	C	L2c	LINE/L2	(5)	3382	3074	1338058
18	12.9	0.0	2.7	chr15	68593871	68593907	(33397282)	+	GA-rich	Low_complexity	1	37	(0)	1338637
634	19.1	15.4	2.6	chr15	68642989	68643219	(33347970)	C	MER113A	DNA/hAT-Charlie	(42)	272	7	1338744
13	19.4	0.0	2.7	chr15	68818487	68818523	(33172666)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	1339117
11	31.8	1.9	0.0	chr15	68818933	68818986	(33172203)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	1339119
15	15.0	0.0	0.0	chr15	69031903	69031932	(32959257)	+	(GCCCC)n	Simple_repeat	1	30	(0)	1339480
116	4.3	2.0	1.3	chr15	69084619	69084766	(32906423)	+	(TTCC)n	Simple_repeat	1	151	(0)	1339595
59	7.6	8.2	3.4	chr15	69090704	69090840	(32900349)	+	G-rich	Low_complexity	1	143	(0)	1339605
64	22.0	1.8	2.4	chr15	69094220	69094386	(32896803)	+	GA-rich	Low_complexity	1	170	(0)	1339611
245	19.7	0.0	13.2	chr15	69159963	69160038	(32831151)	+	MER94B	DNA/hAT-Blackjack	68	133	(0)	1339741
558	27.0	4.4	12.7	chr15	69194949	69195224	(32795965)	+	MIRc	SINE/MIR	2	253	(15)	1339798
1706	15.8	0.0	2.4	chr15	69302081	69302372	(32688817)	C	AluJb	SINE/Alu	(27)	285	1	1339962
49	10.5	0.0	0.0	chr15	69727909	69727938	(32263251)	+	(CCCTC)n	Simple_repeat	1	73	(0)	1340790
21	23.3	0.0	0.0	chr15	69727939	69727981	(32263208)	+	(C)n	Simple_repeat	1	43	(0)	1340791
1811	15.6	0.4	0.4	chr15	69727986	69728260	(32262929)	C	AluJb	SINE/Alu	(34)	278	4	1340792
27	13.9	0.0	0.0	chr15	69824215	69824262	(32166927)	+	(GAGAGA)n	Simple_repeat	1	48	(0)	1340972
284	27.9	4.3	0.0	chr15	69868848	69868958	(32122231)	C	MLT1O	LTR/ERVL-MaLR	(15)	527	412	1341061
323	26.9	11.7	5.8	chr15	69869131	69869291	(32121898)	C	MLT1O	LTR/ERVL-MaLR	(178)	364	180	1341061
375	28.6	13.3	4.9	chr15	69893729	69893974	(32097215)	C	LTR88b	LTR/Gypsy?	(425)	391	122	1341099
13	15.2	2.5	4.9	chr15	70013872	70013911	(31977278)	+	G-rich	Low_complexity	1	41	(0)	1341328
196	28.8	19.0	0.0	chr15	70025314	70025445	(31965744)	C	L2a	LINE/L2	(0)	3426	3264	1341355
12	12.6	2.5	7.3	chr15	70033611	70033650	(31957539)	+	(GCCCAG)n	Simple_repeat	1	41	(0)	1341367
17	20.2	2.0	2.0	chr15	70097428	70097476	(31893713)	+	(CTGCCG)n	Simple_repeat	1	50	(0)	1341463
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
617	19.6	4.8	1.9	chr15	70181268	70181428	(31809761)	C	MER5A	DNA/hAT-Charlie	(23)	166	1	1341647
61	0.0	0.0	0.0	chr15	70181436	70181487	(31809702)	+	(CA)n	Simple_repeat	1	52	(0)	1341648
12	26.9	1.6	4.7	chr15	70181609	70181671	(31809518)	+	(CTGCTCT)n	Simple_repeat	1	64	(0)	1341649
13	17.6	0.0	2.9	chr15	70205111	70205144	(31786045)	+	G-rich	Low_complexity	1	34	(0)	1341699
266	20.0	2.0	0.0	chr15	70322187	70322236	(31668953)	+	MIR	SINE/MIR	110	160	(102)	1341942
456	15.4	0.0	0.0	chr15	70322238	70322302	(31668887)	+	AluJo	SINE/Alu	1	65	(247)	1341943
271	30.7	3.9	0.0	chr15	70322309	70322383	(31668806)	+	MIR	SINE/MIR	151	228	(34)	1341944
81	22.2	1.8	2.7	chr15	70376418	70376634	(31614555)	+	G-rich	Low_complexity	1	221	(0)	1342028
25	6.6	0.0	0.0	chr15	70376696	70376727	(31614462)	+	(A)n	Simple_repeat	1	32	(0)	1342029
1274	16.7	0.0	1.3	chr15	70453333	70453568	(31537621)	C	L1MB5	LINE/L1	(0)	6174	5942	1342167
421	26.6	7.4	2.2	chr15	70453575	70453632	(31537557)	C	L1MB8	LINE/L1	(162)	6009	5951	1342168
40	4.0	1.9	1.8	chr15	70453633	70453686	(31537503)	+	(TCTT)n	Simple_repeat	1	55	(0)	1342169
436	29.8	10.2	0.0	chr15	70507990	70508147	(31483042)	C	MIRb	SINE/MIR	(18)	250	75	1342277
12	19.7	0.0	0.0	chr15	70508406	70508434	(31482755)	+	(CCCCA)n	Simple_repeat	1	29	(0)	1342278
224	14.5	4.8	5.8	chr15	70558586	70559230	(31431959)	+	(CA)n	Simple_repeat	1	676	(0)	1342368
181	25.0	6.2	6.2	chr15	70577012	70577075	(31414114)	C	L3	LINE/CR1	(12)	4087	4024	1342407
542	25.7	17.6	0.5	chr15	70577110	70577320	(31413869)	C	MIR	SINE/MIR	(2)	260	6	1342408
40	21.9	2.1	0.0	chr15	70718230	70718323	(31272866)	+	GA-rich	Low_complexity	1	96	(0)	1342626
57	0.0	0.0	0.0	chr15	70718325	70718373	(31272816)	+	(TG)n	Simple_repeat	1	49	(0)	1342627
400	29.1	4.1	11.9	chr15	70718412	70718704	(31272485)	+	MLT1I	LTR/ERVL-MaLR	100	368	(43)	1342628
261	23.5	3.4	2.3	chr15	71085901	71085987	(30905202)	C	MamRep605	LTR?	(631)	218	131	1343189
29	20.1	6.2	1.9	chr15	71145813	71145909	(30845280)	+	GA-rich	Low_complexity	1	103	(0)	1343283
32	39.3	3.2	2.4	chr15	71786677	71786907	(30204282)	+	GA-rich	Low_complexity	14	248	(0)	1344358
15473	14.0	8.3	4.9	chr15	72085423	72086754	(29904435)	C	L1PREC2	LINE/L1	(4821)	1964	689	1344864
1133	17.2	0.0	2.1	chr15	72127893	72128084	(29863105)	+	AluJr	SINE/Alu	87	274	(38)	1344943
26	20.4	6.2	0.0	chr15	72128093	72128174	(29863015)	+	GA-rich	Low_complexity	1	87	(0)	1344944
22	25.6	2.2	4.3	chr15	72197777	72197867	(29793322)	+	(CGCC)n	Simple_repeat	1	93	(0)	1345070
911	8.8	0.0	5.1	chr15	72237723	72237878	(29753311)	+	L1MA3	LINE/L1	6158	6305	(0)	1345118
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
27	0.0	0.0	0.0	chr15	72725600	72725625	(29265564)	+	(AAAAC)n	Simple_repeat	1	26	(0)	1346005
17	12.7	0.0	0.0	chr15	72797637	72797662	(29193527)	+	(G)n	Simple_repeat	1	26	(0)	1346108
15	31.5	0.0	0.0	chr15	72797680	72797726	(29193463)	+	(GT)n	Simple_repeat	1	47	(0)	1346109
322	24.3	6.4	1.0	chr15	72835419	72835522	(29155667)	C	MIRb	SINE/MIR	(157)	111	2	1346173
14	23.4	3.0	5.8	chr15	73052019	73052085	(28939104)	+	GA-rich	Low_complexity	1	69	(0)	1346523
22	23.7	5.8	0.0	chr15	73052219	73052287	(28938902)	+	(GC)n	Simple_repeat	1	73	(0)	1346524
25	21.0	0.0	1.6	chr15	73633270	73633331	(28357858)	+	G-rich	Low_complexity	1	62	(0)	1347427
284	34.1	3.0	5.2	chr15	73654303	73654438	(28336751)	C	MER5B	DNA/hAT-Charlie	(44)	134	2	1347479
1441	19.4	11.9	4.2	chr15	73654580	73655098	(28336091)	+	MER34A1	LTR/ERV1	11	568	(19)	1347480
15	17.0	0.0	0.0	chr15	73684943	73684975	(28306214)	+	G-rich	Low_complexity	1	33	(0)	1347540
1000	24.1	17.5	1.6	chr15	73694471	73694853	(28296336)	C	MLT1J	LTR/ERVL-MaLR	(18)	494	38	1347559
963	13.0	0.6	8.5	chr15	73694854	73695030	(28296159)	+	AluJo	SINE/Alu	136	298	(14)	1347560
398	26.8	4.7	6.8	chr15	73712175	73712300	(28278889)	C	LTR79	LTR/ERVL	(113)	414	289	1347588
370	32.4	3.3	2.6	chr15	73743384	73743535	(28247654)	+	MIRb	SINE/MIR	47	199	(69)	1347643
30	23.8	4.0	1.0	chr15	73752907	73753006	(28238183)	+	G-rich	Low_complexity	1	104	(0)	1347658
35	27.7	2.6	0.0	chr15	73753146	73753262	(28237927)	+	(CCGCC)n	Simple_repeat	1	120	(0)	1347659
16	19.4	1.7	6.6	chr15	73924656	73924716	(28066473)	+	(TCCC)n	Simple_repeat	1	58	(0)	1347950
2726	23.3	6.1	2.1	chr15	73964738	73964776	(28026413)	C	L1MCc	LINE/L1	(3886)	3055	3020	1348007
275	33.9	8.4	0.0	chr15	73964793	73964901	(28026288)	C	L1MCc	LINE/L1	(5356)	1067	949	1348007
351	22.5	7.3	2.2	chr15	73965004	73965094	(28026095)	C	L1MCc	LINE/L1	(5508)	915	820	1348007
1803	13.9	0.7	0.7	chr15	73992528	73992801	(27998388)	+	AluJr	SINE/Alu	2	275	(37)	1348058
195	36.2	3.1	2.3	chr15	74177845	74177974	(27813215)	+	MamSINE1	SINE/tRNA-RTE	9	139	(151)	1348393
427	25.7	2.1	0.3	chr15	74181614	74181735	(27809454)	C	MIRb	SINE/MIR	(49)	159	37	1348396
284	33.5	7.8	7.3	chr15	74203613	74203967	(27787222)	C	L2a	LINE/L2	(0)	3426	3032	1348438
1991	11.4	1.9	1.3	chr15	74215236	74215545	(27775644)	+	L1MB2	LINE/L1	5853	6164	(7)	1348457
1274	8.4	0.0	0.6	chr15	74215721	74215886	(27775303)	+	AluSq	SINE/Alu	134	298	(15)	1348458
198	27.8	5.3	6.9	chr15	74220843	74220958	(27770231)	+	MamRTE1	LINE/RTE-BovB	2770	2883	(929)	1348469
341	35.7	7.5	1.1	chr15	74239539	74239725	(27751464)	+	MIRb	SINE/MIR	13	212	(56)	1348507
14	8.4	0.0	3.7	chr15	74303964	74303990	(27687199)	+	(AGGG)n	Simple_repeat	1	27	(0)	1348617
601	30.3	3.6	0.0	chr15	74304082	74304266	(27686923)	+	MIRc	SINE/MIR	55	246	(22)	1348618
14	30.0	0.0	5.3	chr15	74318141	74318216	(27672973)	+	G-rich	Low_complexity	1	76	(0)	1348646
228	32.4	8.3	0.0	chr15	74338177	74338287	(27652902)	+	MamTip2	DNA/hAT-Tip100	28	148	(157)	1348672
1168	29.5	10.3	3.4	chr15	74392563	74393189	(27598000)	+	L2a	LINE/L2	2275	2950	(469)	1348759
428	29.8	1.7	0.0	chr15	74434508	74434621	(27556568)	+	Tigger19a	DNA/TcMar-Tigger	78	193	(130)	1348812
1268	24.3	11.3	5.9	chr15	74490026	74490757	(27500432)	+	L2a	LINE/L2	2645	3426	(0)	1348922
12	10.3	6.1	2.9	chr15	74610266	74610298	(27380891)	+	(CCACC)n	Simple_repeat	1	35	(0)	1349179
2323	9.1	0.3	0.3	chr15	74771317	74771614	(27219575)	C	AluSz	SINE/Alu	(14)	298	1	1349489
233	35.9	8.4	5.1	chr15	74804977	74805193	(27185996)	C	L2c	LINE/L2	(753)	2666	2442	1349551
2033	15.2	0.0	0.0	chr15	74805195	74805489	(27185700)	C	AluJo	SINE/Alu	(17)	295	1	1349553
325	32.3	13.2	1.5	chr15	74816898	74817098	(27174091)	C	MIRb	SINE/MIR	(37)	231	4	1349581
741	29.3	8.3	2.1	chr15	74817225	74817461	(27173728)	C	MIRb	SINE/MIR	(14)	254	2	1349582
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
13	5.7	10.0	4.5	chr15	74950446	74950485	(27040704)	+	(TTCC)n	Simple_repeat	1	44	(0)	1349856
19	12.2	4.1	3.9	chr15	74950486	74950493	(27040696)	+	(TTTCC)n	Simple_repeat	2	51	(0)	1349857
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
599	27.9	6.6	2.7	chr15	75193725	75193912	(26797277)	C	MIRb	SINE/MIR	(13)	255	60	1350380
17	6.5	0.0	7.9	chr15	75213330	75213367	(26777822)	+	(CCTC)n	Simple_repeat	1	38	(0)	1350407
66	13.6	1.3	5.7	chr15	75314701	75314840	(26676349)	+	A-rich	Low_complexity	15	149	(0)	1350548
19	12.2	2.7	0.0	chr15	75314839	75314875	(26676314)	+	(GAGGG)n	Simple_repeat	1	38	(0)	1350549
1509	31.6	7.8	6.5	chr15	75314899	75315870	(26675319)	+	ERV3-16A3_I-int	LTR/ERVL	542	1547	(3679)	1350550
18	16.4	2.4	0.0	chr15	75454670	75454710	(26536479)	+	(CGCGCC)n	Simple_repeat	1	42	(0)	1350823
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
17	26.4	0.0	0.0	chr15	75647818	75647867	(26343322)	+	(CTCCTCC)n	Simple_repeat	1	50	(0)	1351301
197	32.8	9.9	0.8	chr15	75651204	75651332	(26339857)	C	MIRc	SINE/MIR	(31)	237	96	1351307
434	23.5	9.2	0.0	chr15	75653291	75653409	(26337780)	C	MER94	DNA/hAT-Blackjack	(1)	133	3	1351314
199	29.5	1.6	0.0	chr15	75653519	75653579	(26337610)	C	MIRb	SINE/MIR	(192)	76	15	1351315
313	33.0	7.0	6.1	chr15	75713456	75713652	(26277537)	C	MIRc	SINE/MIR	(68)	200	2	1351392
1175	13.4	20.8	1.3	chr15	76147751	76147989	(25843200)	+	AluJr	SINE/Alu	3	300	(12)	1352095
926	26.5	10.0	3.1	chr15	76312455	76313061	(25678128)	+	L2a	LINE/L2	2598	3341	(85)	1352368
203	20.8	0.0	1.9	chr15	76313076	76313129	(25678060)	+	L2b	LINE/L2	3030	3082	(293)	1352369
1867	13.8	5.4	0.3	chr15	76313164	76313446	(25677743)	C	AluJr	SINE/Alu	(14)	298	1	1352370
19	13.2	0.0	6.4	chr15	76335895	76335943	(25655246)	+	A-rich	Low_complexity	1	45	(0)	1352419
25	27.4	0.0	2.4	chr15	76335943	76336024	(25655165)	+	GA-rich	Low_complexity	1	82	(0)	1352420
615	25.8	10.6	8.4	chr15	76906107	76906247	(25084942)	C	L2a	LINE/L2	(1)	3425	3286	1353202
1076	25.1	4.0	9.3	chr15	77128953	77129348	(24861841)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	1353587
268	34.7	6.8	0.0	chr15	77527113	77527262	(24463927)	C	MIR3	SINE/MIR	(28)	180	20	1354208
26	27.2	3.9	1.9	chr15	77533685	77533788	(24457401)	+	(CCTCT)n	Simple_repeat	1	108	(0)	1354220
213	29.2	1.1	2.2	chr15	77543593	77543683	(24447506)	C	MIR1_Amn	SINE/MIR	(103)	127	38	1354239
23	26.5	1.3	1.3	chr15	77632810	77632887	(24358302)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	1354379
22	20.6	6.9	2.1	chr15	77632902	77632988	(24358201)	+	(GAGC)n	Simple_repeat	1	93	(0)	1354380
17	3.3	9.7	0.0	chr15	77633008	77633038	(24358151)	+	(TGG)n	Simple_repeat	1	34	(0)	1354381
326	32.8	13.1	5.6	chr15	77813039	77813416	(24177773)	C	L2c	LINE/L2	(52)	3335	2925	1354719
398	21.1	13.0	10.2	chr15	78005225	78005351	(23985838)	+	L2b	LINE/L2	3245	3386	(1)	1355019
3157	20.8	7.6	7.2	chr15	78176967	78177450	(23813739)	+	L1M5	LINE/L1	4468	4976	(1170)	1355367
895	29.9	13.6	4.9	chr15	78437297	78437621	(23553568)	C	L2	LINE/L2	(1195)	2224	1838	1355900
16	9.6	0.0	0.0	chr15	78438919	78438941	(23552248)	+	(A)n	Simple_repeat	1	23	(0)	1355903
11	21.1	2.5	2.4	chr15	78540161	78540200	(23450989)	+	GA-rich	Low_complexity	1	41	(0)	1356136
18	7.2	3.3	0.0	chr15	78669162	78669191	(23321998)	+	(GGA)n	Simple_repeat	1	31	(0)	1356382
677	26.4	1.9	3.8	chr15	78669256	78669464	(23321725)	C	MER103C	DNA/hAT-Charlie	(11)	286	82	1356383
12	20.2	3.5	6.7	chr15	78811266	78811323	(23179866)	+	(GTCCG)n	Simple_repeat	1	60	(0)	1356625
25	11.8	0.0	4.0	chr15	78811423	78811472	(23179717)	+	A-rich	Low_complexity	1	50	(0)	1356626
25	23.8	0.0	3.8	chr15	78811499	78811582	(23179607)	+	(CCCCG)n	Simple_repeat	1	80	(0)	1356627
297	30.8	13.3	3.0	chr15	78814666	78814866	(23176323)	+	L2a	LINE/L2	3102	3326	(49)	1356632
19	22.6	0.0	0.0	chr15	79431475	79431515	(22559674)	+	(GT)n	Simple_repeat	1	41	(0)	1357845
33	7.7	5.4	2.6	chr15	79801085	79801158	(22190031)	+	(TC)n	Simple_repeat	1	78	(0)	1358395
20	4.0	0.0	0.0	chr15	79801159	79801179	(22190010)	+	(AC)n	Simple_repeat	2	22	(0)	1358396
11	24.8	0.0	0.0	chr15	79801180	79801192	(22189997)	+	(ACAGAG)n	Simple_repeat	1	34	(0)	1358397
13	15.8	0.0	7.3	chr15	79923094	79923134	(22068055)	+	(CCGCC)n	Simple_repeat	1	41	(0)	1358601
367	31.7	11.4	4.6	chr15	80059764	80059958	(21931231)	+	L1MDb	LINE/L1	552	761	(5648)	1358904
54	1.8	1.8	0.0	chr15	80153168	80153224	(21837965)	+	(GGAGT)n	Simple_repeat	1	58	(0)	1359073
22	20.2	3.7	4.8	chr15	80404293	80404373	(21586816)	+	GA-rich	Low_complexity	1	84	(0)	1359476
19	26.2	1.2	5.8	chr15	80404332	80404417	(21586772)	+	(GGC)n	Simple_repeat	1	87	(0)	1359477
474	22.6	15.3	4.2	chr15	80636717	80636947	(21354242)	+	LTR50	LTR/ERVL	38	265	(255)	1359821
26	15.4	5.9	1.4	chr15	80863916	80863983	(21127206)	+	(CCTCT)n	Simple_repeat	1	72	(0)	1360243
361	29.9	7.6	6.6	chr15	80915460	80915610	(21075579)	C	LTR85b	LTR/Gypsy?	(237)	586	429	1360338
17	11.0	7.7	0.0	chr15	80915699	80915737	(21075452)	+	(CCT)n	Simple_repeat	1	42	(0)	1360340
1410	11.7	5.3	0.5	chr15	80954737	80954951	(21036238)	+	MER30	DNA/hAT-Charlie	1	226	(4)	1360413
101	5.2	4.9	0.0	chr15	81878199	81878340	(20112849)	+	(CT)n	Simple_repeat	1	149	(0)	1361954
22	17.7	1.9	1.9	chr15	82046055	82046107	(19945082)	+	(CCCT)n	Simple_repeat	1	54	(0)	1362235
19	23.5	1.4	4.2	chr15	82046309	82046378	(19944811)	+	(CCGCCCC)n	Simple_repeat	1	71	(0)	1362236
17	4.9	0.0	0.0	chr15	82046770	82046790	(19944399)	+	(CG)n	Simple_repeat	1	21	(0)	1362237
211	21.5	3.2	2.8	chr15	82058654	82059241	(19931948)	+	(CTC)n	Simple_repeat	1	607	(0)	1362268
288	32.1	13.7	3.4	chr15	82949903	82950260	(19040929)	C	L2a	LINE/L2	(1636)	1783	1383	1363731
401	25.5	16.5	5.8	chr15	83448181	83448438	(18542751)	C	L2b	LINE/L2	(73)	3314	3024	1364648
28	3.3	0.0	0.0	chr15	84571038	84571068	(17420121)	+	(CCCTCAC)n	Simple_repeat	1	31	(0)	1366184
1676	16.5	5.0	0.0	chr15	84586159	84586425	(17404764)	C	AluJr	SINE/Alu	(31)	281	1	1366224
1607	12.0	5.1	7.6	chr15	84586426	84586513	(17404676)	C	L1MA9	LINE/L1	(259)	6041	5965	1366222
879	16.3	3.8	1.1	chr15	84586511	84586690	(17404499)	+	L1MA9	LINE/L1	6123	6307	(5)	1366222
832	29.6	9.2	3.4	chr15	84750326	84751012	(17240177)	C	L2a	LINE/L2	(0)	3426	2770	1366588
38	28.1	4.8	2.3	chr15	84766539	84766706	(17224483)	+	GA-rich	Low_complexity	1	176	(0)	1366623
40	0.0	0.0	0.0	chr15	84766707	84766740	(17224449)	+	(GT)n	Simple_repeat	1	34	(0)	1366624
39	8.7	5.2	5.0	chr15	84889630	84889661	(17101528)	+	(TTTC)n	Simple_repeat	1	31	(0)	1366829
233	22.9	1.6	0.0	chr15	84980664	84980724	(17010465)	C	MIR3	SINE/MIR	(77)	131	70	1367055
1595	26.9	6.9	5.3	chr15	85032959	85033582	(16957607)	+	L1M7	LINE/L1	32	666	(5577)	1367150
2453	10.1	0.0	0.0	chr15	85033584	85033891	(16957298)	+	AluSx1	SINE/Alu	2	309	(3)	1367151
180	32.4	5.2	10.5	chr15	85168688	85168849	(16822340)	+	MER5A	DNA/hAT-Charlie	19	171	(18)	1367351
184	34.2	8.8	0.0	chr15	85168824	85168896	(16822293)	C	MIR	SINE/MIR	(78)	184	105	1367352
17	5.5	10.0	2.3	chr15	85558921	85558960	(16432229)	+	(CCTC)n	Simple_repeat	1	44	(0)	1367985
14	17.2	4.9	6.2	chr15	85558961	85558979	(16432210)	+	(CTCCTC)n	Simple_repeat	3	64	(0)	1367986
17	6.0	8.6	0.0	chr15	85792233	85792267	(16198922)	+	(CTCCCTC)n	Simple_repeat	1	38	(0)	1368352
23	23.6	4.7	3.6	chr15	88255788	88255893	(13735296)	+	G-rich	Low_complexity	1	111	(0)	1372056
14	25.4	3.1	3.0	chr15	88546596	88546659	(13444530)	+	(GCCCCT)n	Simple_repeat	1	66	(0)	1372570
358	24.4	5.5	3.7	chr15	88580629	88580790	(13410399)	C	L2a	LINE/L2	(0)	3426	3262	1372627
790	24.2	7.2	6.2	chr15	88652723	88652995	(13338194)	C	LTR16C	LTR/ERVL	(87)	402	127	1372764
674	23.3	2.4	0.0	chr15	88919001	88919163	(13072026)	+	MER5B	DNA/hAT-Charlie	12	178	(0)	1373253
2118	13.3	0.0	0.0	chr15	89072194	89072486	(12918703)	+	AluSx1	SINE/Alu	1	293	(19)	1373588
52	20.1	2.4	1.5	chr15	89072489	89072615	(12918574)	+	G-rich	Low_complexity	1	130	(0)	1373589
335	12.7	6.0	3.1	chr15	89072629	89072693	(12918496)	+	MLT1I	LTR/ERVL-MaLR	341	407	(4)	1373586
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
13	11.2	6.7	0.0	chr15	89441357	89441386	(12549803)	+	G-rich	Low_complexity	1	32	(0)	1374216
12	15.7	7.3	5.1	chr15	89441421	89441475	(12549714)	+	(GGTCAG)n	Simple_repeat	1	59	(0)	1374217
704	12.4	11.1	12.4	chr15	89754428	89754575	(12236614)	C	MER30	DNA/hAT-Charlie	(80)	150	1	1374810
20	5.4	4.7	4.4	chr15	89999907	89999953	(11991236)	+	(GGAAG)n	Simple_repeat	1	47	(0)	1375383
30	17.3	4.6	0.0	chr15	90001395	90001459	(11989730)	+	GA-rich	Low_complexity	1	68	(0)	1375387
23	21.8	0.0	0.0	chr15	90002020	90002072	(11989117)	+	(GCG)n	Simple_repeat	1	53	(0)	1375394
446	30.1	3.2	3.8	chr15	90051805	90052007	(11939182)	C	MIRb	SINE/MIR	(72)	196	4	1375498
33	20.1	5.2	2.0	chr15	90062142	90062237	(11928952)	+	(TC)n	Simple_repeat	1	101	(0)	1375522
27	24.7	4.9	3.1	chr15	90062238	90062263	(11928926)	+	(TCCCTC)n	Simple_repeat	1	128	(0)	1375523
265	33.2	6.6	2.3	chr15	90106709	90106924	(11884265)	C	L2	LINE/L2	(723)	2696	2471	1375610
2186	11.9	0.7	3.5	chr15	90107326	90107508	(11883681)	C	AluSz	SINE/Alu	(2)	310	136	1375611
15	27.4	0.0	0.0	chr15	90175414	90175461	(11815728)	+	G-rich	Low_complexity	1	48	(0)	1375818
363	29.9	0.0	3.6	chr15	90175566	90175676	(11815513)	C	L2a	LINE/L2	(5)	3421	3315	1375819
1007	32.9	9.4	0.7	chr15	90364449	90365240	(11625949)	+	L2a	LINE/L2	2556	3426	(0)	1376211
761	29.4	3.0	12.3	chr15	90531113	90531585	(11459604)	+	Charlie8	DNA/hAT-Charlie	1	428	(2000)	1376556
281	27.3	18.1	2.5	chr15	90869438	90869595	(11121594)	C	Charlie15a	DNA/hAT-Charlie	(1)	223	36	1377282
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
13	12.0	0.0	3.5	chr15	90957960	90957988	(11033201)	+	(CCCCT)n	Simple_repeat	1	29	(0)	1377412
654	25.7	12.0	3.2	chr15	91047379	91047688	(10943501)	C	L1M5	LINE/L1	(370)	5754	5414	1377597
22	7.8	4.9	0.0	chr15	91047697	91047737	(10943452)	+	(CCTCCTC)n	Simple_repeat	1	43	(0)	1377598
29	6.2	0.0	6.8	chr15	91047756	91047814	(10943375)	+	(TCC)n	Simple_repeat	1	59	(0)	1377599
112	28.0	2.5	1.3	chr15	91047832	91048115	(10943074)	+	(TCC)n	Simple_repeat	1	371	(0)	1377599
15	21.2	3.7	7.1	chr15	92393789	92393800	(9597389)	+	(GCGG)n	Simple_repeat	1	83	(0)	1379798
15	30.8	2.9	0.0	chr15	92393801	92393868	(9597321)	+	G-rich	Low_complexity	1	70	(0)	1379799
29	3.2	0.0	0.0	chr15	92393898	92393929	(9597260)	+	(CGCTGC)n	Simple_repeat	1	32	(0)	1379800
207	34.4	6.9	3.2	chr15	92638545	92638670	(9352519)	+	MIR3	SINE/MIR	7	137	(71)	1380143
1245	21.2	7.9	6.0	chr15	92714100	92714481	(9276708)	+	L1MB3	LINE/L1	5796	6176	(7)	1380273
13	23.2	0.0	2.4	chr15	92714586	92714627	(9276562)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	1380277
980	19.8	0.0	0.6	chr15	92803658	92803835	(9187354)	C	AluJb	SINE/Alu	(129)	183	7	1380480
248	21.5	1.5	3.0	chr15	92881290	92881356	(9109833)	+	MIR3	SINE/MIR	38	103	(105)	1380694
24	26.7	3.1	2.0	chr15	92882610	92882706	(9108483)	+	(GCGGCGG)n	Simple_repeat	1	100	(0)	1380695
16	20.8	2.3	0.0	chr15	92882778	92882821	(9108368)	+	GA-rich	Low_complexity	1	45	(0)	1380696
18	4.7	0.0	0.0	chr15	92900204	92900225	(9090964)	+	(TC)n	Simple_repeat	1	22	(0)	1380713
13	12.0	3.7	0.0	chr15	95177299	95177325	(6813864)	+	GA-rich	Low_complexity	1	28	(0)	1384060
1981	27.5	4.2	9.5	chr15	95177520	95178478	(6812711)	C	L1MC4	LINE/L1	(0)	8042	7148	1384061
11	25.1	0.0	2.5	chr15	95550714	95550753	(6440436)	+	(TCCCCTT)n	Simple_repeat	1	40	(0)	1384617
13	15.0	3.3	0.0	chr15	96053824	96053853	(5937336)	+	GA-rich	Low_complexity	1	31	(0)	1385305
16	23.9	1.9	1.9	chr15	96320838	96320889	(5670300)	+	(CCTT)n	Simple_repeat	1	53	(0)	1385718
21	21.1	0.0	0.0	chr15	96331631	96331679	(5659510)	+	GA-rich	Low_complexity	1	49	(0)	1385730
19	15.5	1.4	9.7	chr15	96331743	96331813	(5659376)	+	(CTCCC)n	Simple_repeat	1	72	(0)	1385731
17	19.2	2.8	0.0	chr15	96333472	96333507	(5657682)	+	(CT)n	Simple_repeat	1	37	(0)	1385736
15	18.8	2.3	2.2	chr15	96333671	96333714	(5657475)	+	(CCTCCC)n	Simple_repeat	1	45	(0)	1385737
12	13.7	0.0	0.0	chr15	96348248	96348271	(5642918)	+	(GTTT)n	Simple_repeat	1	24	(0)	1385745
35	0.0	0.0	0.0	chr15	96348282	96348311	(5642878)	+	(GT)n	Simple_repeat	1	30	(0)	1385746
16	12.5	2.6	2.6	chr15	96414135	96414172	(5577017)	+	G-rich	Low_complexity	1	39	(0)	1385837
182	29.6	14.0	1.0	chr15	98419473	98419571	(3571618)	C	L2a	LINE/L2	(20)	3406	3293	1388611
49	15.2	3.0	1.0	chr15	98419572	98419671	(3571518)	+	GA-rich	Low_complexity	1	103	(0)	1388612
1172	19.1	0.0	5.2	chr15	98419760	98419990	(3571199)	+	AluJo	SINE/Alu	84	302	(10)	1388613
17	26.3	2.2	5.4	chr15	98648104	98648193	(3342996)	+	(CCCCG)n	Simple_repeat	1	92	(0)	1389003
27	9.0	10.3	3.5	chr15	98845340	98845372	(3145817)	+	(TC)n	Simple_repeat	1	35	(0)	1389235
96	5.1	2.1	6.2	chr15	98845373	98845560	(3145629)	+	(CTC)n	Simple_repeat	1	192	(0)	1389236
27	9.0	10.3	3.5	chr15	98845561	98845604	(3145585)	+	(TC)n	Simple_repeat	2	48	(0)	1389237
27	17.8	3.3	5.3	chr15	99251399	99251489	(2739700)	+	(CCGCC)n	Simple_repeat	1	94	(0)	1389847
18	24.8	0.0	2.2	chr15	99790753	99790798	(2200391)	+	(AC)n	Simple_repeat	1	46	(0)	1390626
348	32.8	5.3	4.3	chr15	101147730	101147809	(843380)	C	MIRb	SINE/MIR	(70)	198	114	1392392
1823	15.2	1.4	0.7	chr15	101147810	101148092	(843097)	+	AluJr	SINE/Alu	2	286	(26)	1392393
10885	16.2	6.1	2.4	chr15	101216178	101218277	(772912)	+	L1MC3	LINE/L1	5427	7609	(176)	1392487
257	31.3	16.4	5.0	chr15	101493104	101493365	(497824)	C	L1MEd	LINE/L1	(6446)	640	343	1392856
19	25.3	2.7	7.9	chr15	101493370	101493480	(497709)	+	(TCCC)n	Simple_repeat	1	114	(0)	1392857
2273	8.8	0.7	0.7	chr16	47891	48187	(90290158)	C	AluSx3	SINE/Alu	(12)	299	3	1394106
298	17.6	0.0	0.0	chr16	48409	48459	(90289886)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	407	1394107
450	17.4	12.7	9.2	chr16	48425	48529	(90289816)	+	MLT-int	LTR/ERVL-MaLR	23	136	(1599)	1394108
219	31.6	3.9	0.0	chr16	566783	566880	(89771465)	C	L2c	LINE/L2	(275)	3112	3011	1394964
11	15.2	2.4	7.0	chr16	630884	630925	(89707420)	+	(CCTCTGG)n	Simple_repeat	1	43	(0)	1395033
15	18.9	2.3	2.2	chr16	668148	668191	(89670154)	+	(GGTCCG)n	Simple_repeat	1	45	(0)	1395064
11	13.2	5.7	2.7	chr16	668711	668745	(89669600)	+	(GCGCGG)n	Simple_repeat	1	37	(0)	1395066
12	20.7	2.0	5.9	chr16	1104164	1104213	(89234132)	+	G-rich	Low_complexity	1	51	(0)	1395500
16	16.7	2.4	2.3	chr16	1104273	1104314	(89234031)	+	G-rich	Low_complexity	1	43	(0)	1395500
12	32.6	1.8	0.0	chr16	1141493	1141549	(89196796)	+	G-rich	Low_complexity	1	58	(0)	1395536
13	23.0	3.6	3.5	chr16	1199805	1199860	(89138485)	+	(TGCCCCT)n	Simple_repeat	1	58	(0)	1395584
18	26.1	0.0	8.3	chr16	1379275	1379370	(88958975)	+	(GCCCC)n	Simple_repeat	1	96	(0)	1395811
13	7.2	3.0	5.9	chr16	1379919	1379951	(88958394)	+	(CCTGCA)n	Simple_repeat	1	34	(0)	1395812
212	26.2	10.4	5.5	chr16	2009003	2009111	(88329234)	C	MIR1_Amn	SINE/MIR	(62)	168	54	1396769
15	16.3	0.0	2.8	chr16	2022852	2022887	(88315458)	+	(CCCCTC)n	Simple_repeat	1	36	(0)	1396807
14	8.3	0.0	3.6	chr16	2203487	2203514	(88134831)	+	(GAAGG)n	Simple_repeat	1	28	(0)	1397032
342	33.1	3.4	2.5	chr16	2224219	2224418	(88113927)	+	MIR	SINE/MIR	2	201	(7)	1397069
89	18.3	2.0	2.4	chr16	2364677	2364879	(87973466)	+	GA-rich	Low_complexity	1	207	(0)	1397295
208	31.6	7.9	3.3	chr16	2459187	2459307	(87879038)	+	L2	LINE/L2	1741	1867	(1552)	1397479
17	13.9	2.3	4.4	chr16	2468329	2468372	(87869973)	+	(TCCC)n	Simple_repeat	1	45	(0)	1397488
28	24.9	0.0	0.0	chr16	2768125	2768195	(87570150)	+	(TCC)n	Simple_repeat	1	71	(0)	1397888
591	15.3	3.3	0.8	chr16	2780281	2780399	(87557946)	+	MER21A	LTR/ERVL	149	270	(661)	1397911
1987	17.1	4.4	1.4	chr16	2780448	2780868	(87557477)	+	MER21A	LTR/ERVL	459	892	(39)	1397911
208	36.4	2.7	4.3	chr16	2786240	2786354	(87551991)	C	MIRc	SINE/MIR	(49)	219	107	1397921
14	31.3	3.8	1.2	chr16	2963285	2963364	(87374981)	+	(GCCCCC)n	Simple_repeat	1	83	(0)	1398268
12	8.0	0.0	9.4	chr16	2963558	2963589	(87374756)	+	G-rich	Low_complexity	1	32	(0)	1398269
31	28.8	0.0	0.0	chr16	2989733	2989819	(87348526)	+	GA-rich	Low_complexity	1	87	(0)	1398304
17	21.7	5.5	1.7	chr16	2990029	2990083	(87348262)	+	(CT)n	Simple_repeat	1	58	(0)	1398305
1912	15.3	0.0	4.6	chr16	3056388	3056713	(87281632)	C	AluJo	SINE/Alu	(0)	312	2	1398422
33	0.0	0.0	0.0	chr16	3065512	3065542	(87272803)	+	(TCTGTC)n	Simple_repeat	1	31	(0)	1398436
12	15.8	0.0	3.3	chr16	3115812	3115841	(87222504)	+	(CCCCT)n	Simple_repeat	1	30	(0)	1398530
345	11.0	2.7	4.0	chr16	3131735	3131810	(87206535)	+	LTR41C	LTR/ERVL	1	75	(626)	1398564
307	24.8	3.5	9.2	chr16	3131837	3131956	(87206389)	+	LTR41C	LTR/ERVL	56	168	(533)	1398564
205	31.3	2.0	5.7	chr16	3132017	3132121	(87206224)	+	MIRb	SINE/MIR	53	153	(115)	1398565
1487	17.6	0.0	1.2	chr16	3156951	3157195	(87181150)	C	AluJb	SINE/Alu	(10)	302	61	1398613
654	1.4	0.0	0.0	chr16	3157405	3157477	(87180868)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	1398614
15	20.2	2.0	4.0	chr16	3188533	3188581	(87149764)	+	G-rich	Low_complexity	1	50	(0)	1398694
1997	18.2	3.8	0.5	chr16	3245661	3246064	(87092281)	+	L1MB3	LINE/L1	5480	5897	(286)	1398815
225	19.1	2.1	0.0	chr16	3246065	3246111	(87092234)	C	MER5B	DNA/hAT-Charlie	(113)	65	18	1398816
15	15.0	0.0	0.0	chr16	3246113	3246142	(87092203)	+	(CTTCC)n	Simple_repeat	1	30	(0)	1398817
253	31.6	3.1	7.7	chr16	3349028	3349195	(86989150)	+	MIRc	SINE/MIR	85	244	(24)	1399014
1948	8.8	7.5	0.0	chr16	3464023	3464311	(86874034)	C	AluSz	SINE/Alu	(0)	312	2	1399222
297	28.0	4.1	0.0	chr16	3716864	3716956	(86621389)	+	L2a	LINE/L2	3330	3426	(0)	1399695
447	26.6	5.0	4.5	chr16	3854349	3854525	(86483820)	+	MLT1L	LTR/ERVL-MaLR	397	574	(36)	1399921
23	27.5	1.8	4.5	chr16	3879962	3879999	(86458346)	+	(GGCGAG)n	Simple_repeat	1	74	(37)	1399963
15	23.1	1.9	3.6	chr16	3880000	3880053	(86458292)	+	(GCGA)n	Simple_repeat	1	55	(0)	1399964
23	27.5	1.8	4.5	chr16	3880054	3880070	(86458275)	+	(GGCGAG)n	Simple_repeat	75	111	(0)	1399963
694	17.5	2.1	0.7	chr16	3928096	3928233	(86410112)	+	L1MC1	LINE/L1	6165	6304	(29)	1400084
29	6.8	0.0	5.7	chr16	3928242	3928294	(86410051)	+	(AAGGG)n	Simple_repeat	1	53	(0)	1400092
2336	9.6	0.0	1.0	chr16	3928297	3928597	(86409748)	+	AluSx1	SINE/Alu	1	298	(14)	1400093
2364	8.5	0.0	0.0	chr16	4202312	4202604	(86135741)	+	AluY	SINE/Alu	1	293	(18)	1400666
2704	12.1	7.6	2.8	chr16	4244304	4244803	(86093542)	+	LTR9	LTR/ERV1	1	526	(86)	1400737
189	22.0	0.0	3.9	chr16	4271706	4271757	(86066588)	+	AmnSINE1	SINE/5S-Deu-L2	76	125	(450)	1400801
15	0.0	0.0	4.3	chr16	4272286	4272308	(86066037)	+	(AGGA)n	Simple_repeat	1	23	(0)	1400802
17	16.1	0.0	6.4	chr16	4272869	4272915	(86065430)	+	(GGC)n	Simple_repeat	1	47	(0)	1400803
60	1.8	0.0	0.0	chr16	4272948	4273003	(86065342)	+	(GT)n	Simple_repeat	1	56	(0)	1400804
19	30.2	0.0	6.4	chr16	4273125	4273233	(86065112)	+	G-rich	Low_complexity	1	109	(0)	1400805
17	20.7	5.7	2.7	chr16	4694370	4694439	(85643906)	+	G-rich	Low_complexity	1	74	(0)	1401670
49	25.4	0.0	2.3	chr16	5065043	5065174	(85273171)	+	(TGTG)n	Simple_repeat	1	132	(0)	1402492
21	12.2	2.1	4.1	chr16	5071862	5071909	(85266436)	+	(TGC)n	Simple_repeat	1	49	(0)	1402509
120	4.1	0.0	0.0	chr16	8660781	8660907	(81677438)	+	(GGA)n	Simple_repeat	1	127	(0)	1409531
13	16.3	0.0	5.3	chr16	8880215	8880252	(81458093)	+	G-rich	Low_complexity	1	38	(0)	1410051
3390	10.3	1.8	0.0	chr16	9033053	9033535	(81304810)	+	THE1-int	LTR/ERVL-MaLR	939	1430	(150)	1410390
108	9.6	0.0	0.6	chr16	9033723	9033881	(81304464)	+	(CCTT)n	Simple_repeat	1	159	(0)	1410391
15	7.8	0.0	6.5	chr16	9091355	9091385	(81246960)	+	(CTC)n	Simple_repeat	1	31	(0)	1410574
1261	19.9	0.7	0.0	chr16	10579368	10579639	(79758706)	C	L1MB3	LINE/L1	(9)	6174	5901	1413752
36	0.0	0.0	0.0	chr16	10579709	10579739	(79758606)	+	(CA)n	Simple_repeat	1	31	(0)	1413753
12	14.9	4.9	4.7	chr16	10580554	10580594	(79757751)	+	(GCTG)n	Simple_repeat	1	43	(0)	1413754
1544	18.9	2.6	1.9	chr16	11198220	11198484	(79139861)	+	AluJo	SINE/Alu	46	312	(0)	1415084
28	27.0	3.5	3.3	chr16	11198485	11198600	(79139745)	+	GA-rich	Low_complexity	1	120	(0)	1415085
397	31.9	12.0	2.3	chr16	11198602	11198774	(79139571)	C	MIRb	SINE/MIR	(50)	218	27	1415086
305	33.6	2.8	1.4	chr16	11356572	11356779	(78981566)	C	MIRb	SINE/MIR	(35)	233	23	1415499
2860	10.6	1.7	5.2	chr16	11474879	11475173	(78863172)	+	MER4C	LTR/ERV1	18	314	(151)	1415769
1386	5.4	0.0	0.0	chr16	11475174	11475341	(78863004)	+	L1PA8	LINE/L1	6004	6171	(1)	1415771
151	18.8	5.5	1.4	chr16	11596453	11596852	(78741493)	+	GA-rich	Low_complexity	1	422	(0)	1416055
576	25.4	10.2	3.1	chr16	11596872	11597062	(78741283)	C	MIRb	SINE/MIR	(21)	247	42	1416056
1816	17.3	1.3	0.7	chr16	11640929	11641229	(78697116)	+	AluJb	SINE/Alu	1	303	(9)	1416183
14	18.8	0.0	0.0	chr16	11641352	11641382	(78696963)	+	(GACA)n	Simple_repeat	1	31	(0)	1416184
401	22.6	9.7	4.2	chr16	11690102	11690267	(78648078)	C	UCON4	Unknown	(73)	230	55	1416299
226	27.7	7.8	1.2	chr16	12228783	12228866	(78109479)	C	MIRc	SINE/MIR	(118)	150	61	1417516
715	26.2	11.3	10.0	chr16	12228898	12229326	(78109019)	+	L2a	LINE/L2	2992	3426	(0)	1417517
1716	25.4	10.5	2.5	chr16	12539108	12540236	(77798109)	C	L1MD3	LINE/L1	(174)	6557	5326	1418138
12	18.1	0.0	3.0	chr16	14003354	14003386	(76334959)	+	(GCCCCT)n	Simple_repeat	1	33	(0)	1421289
373	29.3	8.3	7.1	chr16	14013919	14014157	(76324188)	+	L2a	LINE/L2	3181	3422	(4)	1421317
372	26.8	12.9	10.9	chr16	14014184	14014264	(76324081)	+	MER113	DNA/hAT-Charlie	75	159	(362)	1421318
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
24	29.2	0.0	5.8	chr16	14071388	14071446	(76266899)	+	G-rich	Low_complexity	1	120	(0)	1421472
1938	13.6	0.0	0.0	chr16	14325202	14325481	(76012864)	+	AluJb	SINE/Alu	1	280	(32)	1421862
2345	8.3	0.7	0.7	chr16	18790551	18790839	(71547506)	C	AluSc	SINE/Alu	(14)	295	7	1431958
861	30.8	2.5	4.4	chr16	19136015	19136425	(71201920)	+	LTR16C	LTR/ERVL	83	485	(4)	1432786
319	19.3	2.2	7.4	chr16	19137410	19137504	(71200841)	C	L1ME3A	LINE/L1	(252)	5921	5832	1432789
747	18.2	6.1	3.4	chr16	19137505	19137680	(71200665)	+	MER20	DNA/hAT-Charlie	39	219	(0)	1432790
16	11.2	2.3	6.7	chr16	19168188	19168236	(71170109)	+	(CCCCT)n	Simple_repeat	1	46	(0)	1432876
12	10.3	2.7	7.9	chr16	19290318	19290354	(71047991)	+	(CCCT)n	Simple_repeat	1	38	(0)	1433181
491	30.2	9.5	2.3	chr16	19290361	19290624	(71047721)	+	L2c	LINE/L2	2938	3222	(165)	1433182
71	9.7	5.9	4.9	chr16	19490712	19490778	(70847567)	+	(TTCC)n	Simple_repeat	1	295	(0)	1433695
92	12.5	4.4	4.7	chr16	19490779	19491003	(70847342)	+	(TTCCC)n	Simple_repeat	1	235	(0)	1433696
1732	20.5	0.3	0.0	chr16	19491008	19491305	(70847040)	C	AluJr	SINE/Alu	(9)	303	5	1433697
1740	17.1	2.0	0.0	chr16	19689909	19690206	(70648139)	C	AluJr	SINE/Alu	(8)	304	1	1434121
17	17.8	0.0	2.4	chr16	19690307	19690347	(70647998)	+	G-rich	Low_complexity	1	41	(0)	1434122
227	31.3	9.8	2.4	chr16	19690349	19690518	(70647827)	+	L3	LINE/CR1	3893	4076	(23)	1434123
333	24.3	10.3	2.1	chr16	19712080	19712222	(70626123)	+	L3	LINE/CR1	3934	4089	(10)	1434161
224	26.3	1.7	0.0	chr16	19712358	19712414	(70625931)	C	MIR1_Amn	SINE/MIR	(120)	110	53	1434162
778	26.6	6.2	0.3	chr16	19712492	19712722	(70625623)	+	MIR	SINE/MIR	13	254	(8)	1434163
29	24.8	0.0	4.3	chr16	20138164	20138255	(70200090)	+	(TCCCC)n	Simple_repeat	1	92	(0)	1435244
327	29.0	1.8	0.0	chr16	20138283	20138389	(70199956)	C	L1ME4a	LINE/L1	(206)	5918	5810	1435245
14	21.4	4.6	4.4	chr16	20869033	20869097	(69469248)	+	G-rich	Low_complexity	1	68	(0)	1436629
13	22.5	2.0	3.9	chr16	21278385	21278434	(69059911)	+	(CCCCG)n	Simple_repeat	1	51	(0)	1437565
15	12.0	0.0	0.0	chr16	21301852	21301878	(69036467)	+	(GCG)n	Simple_repeat	1	27	(0)	1437616
16	0.0	0.0	0.0	chr16	22008746	22008763	(68329582)	+	(A)n	Simple_repeat	1	18	(0)	1439105
11	21.2	0.0	2.9	chr16	22191055	22191089	(68147256)	+	(CCCTGC)n	Simple_repeat	1	35	(0)	1439494
11	16.4	5.9	0.0	chr16	22191164	22191197	(68147148)	+	(TCCCAG)n	Simple_repeat	1	36	(0)	1439495
370	35.0	4.3	1.3	chr16	22298460	22298618	(68039727)	C	MIR	SINE/MIR	(97)	165	2	1439787
12	7.8	7.4	0.0	chr16	22374463	22374489	(67963856)	+	(CCGG)n	Simple_repeat	1	29	(0)	1439922
255	24.2	16.9	0.0	chr16	23060098	23060225	(67278120)	+	L1MEg	LINE/L1	1534	1687	(4397)	1441378
31	24.2	1.4	0.0	chr16	23143537	23143624	(67194721)	+	GA-rich	Low_complexity	1	89	(0)	1441504
884	19.9	3.2	0.0	chr16	23143700	23143880	(67194465)	C	MER20	DNA/hAT-Charlie	(4)	215	29	1441505
55	15.7	8.0	2.3	chr16	23208561	23208734	(67129611)	+	(CTTCC)n	Simple_repeat	1	183	(0)	1441672
2026	11.3	1.1	1.4	chr16	23423082	23423364	(66914981)	+	AluSx	SINE/Alu	2	283	(29)	1442232
13	22.1	4.8	4.5	chr16	23680017	23680079	(66658266)	+	(CCCCT)n	Simple_repeat	1	66	(0)	1442843
89	13.1	1.9	1.2	chr16	23801665	23801824	(66536521)	+	(TTCCC)n	Simple_repeat	1	163	(0)	1443166
19	11.2	0.0	0.0	chr16	23835488	23835516	(66502829)	+	(GT)n	Simple_repeat	1	29	(0)	1443257
311	28.0	19.1	0.0	chr16	23974495	23974676	(66363669)	+	L3	LINE/CR1	3832	4056	(43)	1443588
14	17.7	0.0	0.0	chr16	24014265	24014296	(66324049)	+	GA-rich	Low_complexity	1	32	(0)	1443668
18	0.0	0.0	0.0	chr16	24729302	24729321	(65609024)	+	(T)n	Simple_repeat	1	20	(0)	1445419
17	21.6	1.8	3.5	chr16	24730022	24730078	(65608267)	+	(GCCGC)n	Simple_repeat	1	58	(0)	1445421
12	7.8	7.4	0.0	chr16	24730119	24730145	(65608200)	+	(CCCCT)n	Simple_repeat	1	29	(0)	1445422
28	0.0	3.3	0.0	chr16	24730214	24730243	(65608102)	+	(TGTTTT)n	Simple_repeat	1	31	(0)	1445423
2265	13.5	0.0	0.0	chr16	24895207	24895518	(65442827)	+	AluSx1	SINE/Alu	1	312	(0)	1445770
40	24.9	1.0	0.0	chr16	24895527	24895626	(65442719)	+	GA-rich	Low_complexity	1	101	(0)	1445771
2573	17.3	2.5	4.2	chr16	25049628	25050152	(65288193)	+	Tigger3b	DNA/TcMar-Tigger	25	540	(691)	1446106
2110	11.3	5.8	0.0	chr16	25050153	25050443	(65287902)	C	AluSx3	SINE/Alu	(1)	310	2	1446107
844	23.2	11.4	8.0	chr16	25110536	25110924	(65227421)	C	L1ME3F	LINE/L1	(63)	6180	5777	1446224
28	0.0	0.0	0.0	chr16	27110175	27110201	(63228144)	+	(T)n	Simple_repeat	1	27	(0)	1450387
580	13.3	0.0	3.1	chr16	27155305	27155402	(63182943)	+	AluJr4	SINE/Alu	49	143	(169)	1450488
447	22.3	13.2	1.9	chr16	27313289	27313440	(63024905)	+	MIR	SINE/MIR	98	267	(1)	1450852
762	24.8	14.8	1.9	chr16	28157483	28157950	(62180395)	+	L1M5	LINE/L1	5168	5694	(500)	1452753
535	25.7	9.0	3.7	chr16	28157949	28158243	(62180102)	+	L1ME5	LINE/L1	5721	6032	(162)	1452755
242	24.4	17.4	1.1	chr16	28259603	28259867	(62078478)	+	L2c	LINE/L2	2650	2966	(453)	1453027
404	33.1	1.5	0.3	chr16	28277941	28278110	(62060235)	+	MIR	SINE/MIR	43	212	(56)	1453081
18	11.8	5.3	0.0	chr16	28278313	28278350	(62059995)	+	(CCACC)n	Simple_repeat	1	40	(0)	1453082
1087	16.7	0.0	1.1	chr16	28278351	28278524	(62059821)	C	AluJb	SINE/Alu	(21)	291	120	1453083
238	23.2	1.8	0.0	chr16	28532646	28532701	(61805644)	C	MIR3	SINE/MIR	(52)	156	100	1453771
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
22	0.0	0.0	0.0	chr16	28822936	28822959	(61515386)	+	(C)n	Simple_repeat	1	24	(0)	1454525
13	16.5	0.0	0.0	chr16	28863250	28863276	(61475069)	+	(CCA)n	Simple_repeat	1	27	(0)	1454614
13	29.6	0.0	0.0	chr16	28863277	28863294	(61475051)	+	(CCCACC)n	Simple_repeat	2	46	(0)	1454615
195	26.7	1.6	1.6	chr16	28952154	28952214	(61386131)	+	OldhAT1	DNA/hAT-Ac	2425	2485	(363)	1454834
11	20.8	0.0	2.9	chr16	29679243	29679277	(60659068)	+	(ACCCCT)n	Simple_repeat	1	35	(0)	1456281
1557	22.6	7.9	4.8	chr16	29679667	29679959	(60658386)	C	LTR14C	LTR/ERVK	(41)	546	152	1456282
20	31.1	3.9	0.9	chr16	29812107	29812217	(60526128)	+	G-rich	Low_complexity	1	114	(0)	1456616
14	20.2	0.0	0.0	chr16	29812228	29812261	(60526084)	+	(CCTC)n	Simple_repeat	1	34	(0)	1456617
13	11.3	0.0	8.6	chr16	29814178	29814212	(60524133)	+	(CCT)n	Simple_repeat	1	35	(0)	1456618
19	21.8	5.0	3.6	chr16	29814538	29814622	(60523723)	+	(CTCTC)n	Simple_repeat	1	86	(0)	1456619
13	27.2	3.1	3.0	chr16	29816950	29817014	(60521331)	+	GA-rich	Low_complexity	1	67	(0)	1456622
848	31.6	21.7	2.3	chr16	29849396	29849813	(60488532)	+	L2	LINE/L2	1210	1693	(1726)	1456697
2195	14.1	0.0	0.0	chr16	29849814	29850119	(60488226)	C	AluSg	SINE/Alu	(3)	307	2	1456698
13	16.8	0.0	5.4	chr16	29899618	29899654	(60438691)	+	GA-rich	Low_complexity	1	37	(0)	1456816
277	25.0	6.7	0.0	chr16	29925497	29925580	(60412765)	+	MIR	SINE/MIR	170	259	(3)	1456867
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
1935	16.5	0.3	0.7	chr16	29944267	29944569	(60393776)	+	AluJb	SINE/Alu	1	302	(10)	1456932
2595	5.6	0.0	0.0	chr16	29970965	29971267	(60367078)	+	AluY	SINE/Alu	1	303	(8)	1457005
11	24.4	0.0	0.0	chr16	29974030	29974063	(60364282)	+	G-rich	Low_complexity	1	34	(0)	1457008
378	32.1	1.2	12.0	chr16	30021886	30021966	(60316379)	+	MIR	SINE/MIR	83	154	(108)	1457091
530	30.5	7.3	0.6	chr16	30040311	30040488	(60297857)	C	MIRb	SINE/MIR	(10)	258	68	1457126
24	20.6	6.2	5.0	chr16	30040516	30040628	(60297717)	+	GA-rich	Low_complexity	1	120	(0)	1457127
2066	13.4	0.0	2.6	chr16	30040645	30040951	(60297394)	C	AluJo	SINE/Alu	(4)	308	10	1457128
295	30.2	12.1	3.6	chr16	30053643	30053838	(60284507)	C	L2b	LINE/L2	(213)	3162	2948	1457167
17	22.0	1.8	3.5	chr16	30064328	30064383	(60273962)	+	G-rich	Low_complexity	1	57	(0)	1457196
289	26.6	1.2	0.0	chr16	30092840	30092918	(60245427)	C	MIRc	SINE/MIR	(77)	191	112	1457246
2157	12.3	0.7	0.7	chr16	30106701	30107008	(60231337)	C	AluSx	SINE/Alu	(4)	308	1	1457268
987	20.1	0.0	0.6	chr16	30107009	30107019	(60231326)	C	AluJb	SINE/Alu	(181)	131	121	1457267
14	29.8	3.9	1.2	chr16	30107025	30107094	(60231251)	+	(CTCTCC)n	Simple_repeat	1	72	(0)	1457269
1754	15.5	1.7	4.5	chr16	30107095	30107404	(60230941)	C	AluJr	SINE/Alu	(11)	301	1	1457270
25	10.2	0.0	2.3	chr16	30183646	30183689	(60154656)	+	(CTC)n	Simple_repeat	1	44	(0)	1457487
15	17.7	5.0	2.4	chr16	30183779	30183818	(60154527)	+	(GC)n	Simple_repeat	1	42	(0)	1457488
12	19.4	0.0	5.1	chr16	30185869	30185907	(60152438)	+	(CCTGCTG)n	Simple_repeat	1	39	(0)	1457489
21	27.9	3.5	1.1	chr16	30370286	30370370	(59967975)	+	(GGCGC)n	Simple_repeat	1	88	(0)	1457867
1775	16.1	0.3	4.4	chr16	30376785	30376930	(59961415)	+	AluJr	SINE/Alu	1	138	(174)	1457877
38	20.4	1.2	0.0	chr16	30378822	30378906	(59959439)	+	G-rich	Low_complexity	1	86	(0)	1457880
13	29.6	1.5	3.0	chr16	30394933	30394997	(59943348)	+	(CCCCAG)n	Simple_repeat	1	66	(0)	1457926
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
349	20.3	5.5	0.0	chr16	30399313	30399381	(59938964)	+	L2a	LINE/L2	3353	3425	(1)	1457930
930	23.2	5.3	1.7	chr16	30409813	30410049	(59928296)	+	MIR	SINE/MIR	17	262	(0)	1457961
1649	25.1	12.3	5.8	chr16	30416218	30416803	(59921542)	+	L2a	LINE/L2	2265	2883	(536)	1457979
862	23.1	13.4	2.9	chr16	30598185	30598429	(59739916)	C	LTR40c	LTR/ERVL	(1)	464	190	1458437
751	16.0	0.0	6.4	chr16	30598425	30598451	(59739894)	C	FLAM_C	SINE/Alu	(2)	131	112	1458438
2254	11.4	0.3	0.0	chr16	30598452	30598758	(59739587)	+	AluSq2	SINE/Alu	1	308	(5)	1458439
13	22.4	0.0	4.4	chr16	30650822	30650866	(59687479)	+	G-rich	Low_complexity	1	45	(0)	1458569
41	21.8	0.0	0.0	chr16	30659836	30659925	(59678420)	+	GA-rich	Low_complexity	1	90	(0)	1458577
1022	24.2	2.0	2.8	chr16	30693592	30693842	(59644503)	C	Arthur1C	DNA/hAT-Tip100	(112)	251	3	1458672
15	17.1	2.4	2.4	chr16	30693934	30693974	(59644371)	+	G-rich	Low_complexity	1	42	(0)	1458673
241	32.6	7.7	4.4	chr16	30777390	30777614	(59560731)	+	L2b	LINE/L2	3093	3325	(50)	1458835
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
860	24.4	15.4	8.7	chr16	30881443	30881952	(59456393)	+	L2a	LINE/L2	2807	3332	(94)	1459088
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
14	23.0	0.0	0.0	chr16	30923682	30923733	(59414612)	+	(CCCCTTT)n	Simple_repeat	1	52	(0)	1459206
618	26.7	5.5	1.0	chr16	31008521	31008713	(59329632)	+	MIRc	SINE/MIR	31	232	(36)	1459377
284	18.6	7.8	0.0	chr16	31075023	31075081	(59263264)	+	MIRb	SINE/MIR	177	240	(28)	1459563
44	19.5	0.9	4.3	chr16	31404778	31404891	(58933454)	+	(TCCT)n	Simple_repeat	1	115	(0)	1460241
2213	7.9	1.6	7.3	chr16	31456184	31456512	(58881833)	+	AluSz	SINE/Alu	3	312	(0)	1460361
2378	17.9	2.5	2.3	chr16	31701035	31701520	(58636825)	C	MER57E3	LTR/ERV1	(0)	487	1	1460710
1375	21.5	16.1	2.3	chr16	31877258	31877775	(58460570)	C	MER92B	LTR/ERV1	(0)	636	34	1460891
16	22.4	3.2	3.1	chr16	46691893	46691918	(43646427)	+	(CTCTTT)n	Simple_repeat	1	40	(0)	1465824
24	3.0	2.7	2.6	chr16	46691919	46691932	(43646413)	+	(CT)n	Simple_repeat	1	14	(0)	1465825
31	0.0	0.0	0.0	chr16	46691933	46691959	(43646386)	+	(CA)n	Simple_repeat	1	27	(0)	1465826
24	3.0	2.7	2.6	chr16	46691960	46691981	(43646364)	+	(CT)n	Simple_repeat	1	22	(0)	1465827
43	17.7	2.5	4.8	chr16	47045712	47045835	(43292510)	+	(CCTCT)n	Simple_repeat	1	121	(0)	1466633
1903	16.5	1.3	2.5	chr16	47045840	47046155	(43292190)	C	AluJb	SINE/Alu	(0)	312	1	1466634
209	32.1	15.8	2.4	chr16	47584917	47585085	(42753260)	+	MamSINE1	SINE/tRNA-RTE	76	271	(19)	1467359
188	32.0	15.6	0.6	chr16	48357095	48357273	(41981072)	C	MIRb	SINE/MIR	(37)	231	21	1468601
13	21.4	2.6	0.0	chr16	48384646	48384683	(41953662)	+	(GCCGAGG)n	Simple_repeat	1	39	(0)	1468646
17	21.6	6.1	1.4	chr16	48610176	48610241	(41728104)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	1469092
1271	23.6	9.4	1.7	chr16	49350240	49350593	(40987752)	+	MLT1B	LTR/ERVL-MaLR	1	384	(6)	1470376
22	13.8	1.9	3.8	chr16	49408052	49408103	(40930242)	+	(TCCCCT)n	Simple_repeat	1	53	(0)	1470482
714	25.9	7.6	10.4	chr16	49563498	49563674	(40774671)	C	MIR	SINE/MIR	(65)	197	9	1470738
14	24.9	1.8	3.5	chr16	49565807	49565862	(40772483)	+	A-rich	Low_complexity	1	57	(0)	1470741
24	26.8	0.0	2.7	chr16	49565868	49565941	(40772404)	+	GA-rich	Low_complexity	1	74	(0)	1470742
27	15.5	0.0	0.0	chr16	49565978	49566027	(40772318)	+	(CCAT)n	Simple_repeat	1	50	(0)	1470743
13	8.3	3.6	3.5	chr16	49608301	49608328	(40730017)	+	GA-rich	Low_complexity	1	29	(0)	1470798
41	10.3	1.3	3.8	chr16	49700885	49700963	(40637382)	+	G-rich	Low_complexity	1	80	(0)	1470954
25	8.4	0.0	0.0	chr16	49701455	49701492	(40636853)	+	(GAGGG)n	Simple_repeat	1	38	(0)	1470955
32	12.8	7.6	1.2	chr16	49855654	49855732	(40482613)	+	(GCTC)n	Simple_repeat	1	85	(0)	1471240
13	13.3	9.3	2.1	chr16	49855794	49855836	(40482509)	+	(CCG)n	Simple_repeat	1	47	(0)	1471241
415	29.9	10.2	2.5	chr16	49922180	49922495	(40415850)	C	MamRep4096	DNA/hAT-Tip100	(56)	370	28	1471388
503	27.1	9.8	5.9	chr16	50219313	50219634	(40118711)	C	L1ME4b	LINE/L1	(228)	664	329	1472079
32	20.4	9.2	4.2	chr16	50219646	50219656	(40118689)	+	(TTCTC)n	Simple_repeat	1	33	(157)	1472080
27	29.1	6.0	0.0	chr16	50219657	50219772	(40118573)	+	(TCTCTC)n	Simple_repeat	1	123	(0)	1472081
32	20.4	9.2	4.2	chr16	50219773	50219819	(40118526)	+	(TTCTC)n	Simple_repeat	34	190	(0)	1472080
14	11.7	8.1	0.0	chr16	50253779	50253815	(40084530)	+	(GGTGGA)n	Simple_repeat	1	40	(0)	1472140
1671	24.1	7.7	5.1	chr16	50365208	50366314	(39972031)	+	HAL1	LINE/L1	575	1785	(722)	1472317
491	28.4	8.8	1.8	chr16	50374541	50374823	(39963522)	C	L2b	LINE/L2	(977)	2442	2138	1472331
12	13.4	5.7	2.7	chr16	50551114	50551148	(39787197)	+	G-rich	Low_complexity	1	37	(0)	1472722
13	18.1	2.0	6.0	chr16	50742150	50742198	(39596147)	+	G-rich	Low_complexity	1	50	(0)	1473097
214	6.2	3.0	0.0	chr16	50742554	50742585	(39595760)	C	MIR1_Amn	SINE/MIR	(79)	151	119	1473098
21	23.1	3.3	0.0	chr16	51151701	51151761	(39186584)	+	(CCCT)n	Simple_repeat	1	63	(0)	1473829
32	23.3	0.0	0.0	chr16	51543193	51543260	(38795085)	+	(CA)n	Simple_repeat	1	68	(0)	1474533
306	29.3	10.3	9.5	chr16	52547088	52547298	(37791047)	+	L1MDb	LINE/L1	519	731	(5678)	1476160
260	13.6	0.2	0.2	chr16	53052893	53053313	(37285032)	+	(CCT)n	Simple_repeat	1	422	(0)	1477111
17	20.6	0.0	0.0	chr16	53055666	53055704	(37282641)	+	(CCT)n	Simple_repeat	1	39	(0)	1477120
1777	30.1	8.5	1.1	chr16	53152702	53153411	(37184934)	C	L2a	LINE/L2	(982)	2437	1671	1477356
1109	17.3	0.0	0.0	chr16	53636999	53637160	(36701185)	C	FAM	SINE/Alu	(23)	162	1	1478178
395	23.7	3.3	2.5	chr16	53637172	53637292	(36701053)	C	L1ME1	LINE/L1	(76)	6103	5982	1478179
450	36.8	3.1	0.5	chr16	53808656	53808846	(36529499)	+	MER91A	DNA/hAT-Tip100	1	196	(0)	1478469
182	17.9	9.5	4.3	chr16	53946036	53946105	(36392240)	+	L3	LINE/CR1	869	942	(3157)	1478690
19	8.3	2.4	4.7	chr16	53946165	53946206	(36392139)	+	A-rich	Low_complexity	1	43	(0)	1478691
30	33.0	0.0	2.3	chr16	54285122	54285250	(36053095)	+	(CTC)n	Simple_repeat	1	129	(0)	1479228
24	23.2	7.4	2.3	chr16	54286378	54286498	(36051847)	+	(CGCTCCT)n	Simple_repeat	1	130	(0)	1479233
14	12.2	8.1	0.0	chr16	54286558	54286594	(36051751)	+	(CTCTCCT)n	Simple_repeat	1	40	(0)	1479234
17	9.1	0.0	0.0	chr16	54654989	54655012	(35683333)	+	(A)n	Simple_repeat	1	24	(0)	1479918
18	27.1	0.0	6.7	chr16	55324226	55324315	(35014030)	+	(CCCTCT)n	Simple_repeat	1	90	(0)	1481209
427	25.4	16.0	5.0	chr16	55623587	55623768	(34714577)	+	MIRc	SINE/MIR	9	214	(54)	1481700
20	23.8	3.6	3.5	chr16	56191467	56191550	(34146795)	+	(TCCCTC)n	Simple_repeat	1	87	(0)	1482660
32	26.1	4.0	4.5	chr16	56281476	56281626	(34056719)	+	(CTCTTTC)n	Simple_repeat	1	157	(0)	1482823
645	23.4	21.3	1.3	chr16	56703588	56704019	(33634326)	+	L2a	LINE/L2	2774	3338	(88)	1483585
15	3.8	0.0	9.1	chr16	56730007	56730039	(33608306)	+	(GCCCC)n	Simple_repeat	1	33	(0)	1483652
209	36.3	1.1	0.0	chr16	56788290	56788380	(33549965)	C	MamSINE1	SINE/tRNA-RTE	(43)	247	156	1483724
1003	23.5	15.4	4.8	chr16	56949880	56950172	(33388173)	+	MLT2C1	LTR/ERVL	62	397	(0)	1484019
14	7.0	6.2	2.9	chr16	56950388	56950419	(33387926)	+	(CAGG)n	Simple_repeat	1	34	(0)	1484025
21	3.6	0.0	0.0	chr16	57061924	57061952	(33276393)	+	(AAGA)n	Simple_repeat	1	29	(0)	1484267
13	7.7	0.0	9.1	chr16	57092510	57092542	(33245803)	+	(CCTCC)n	Simple_repeat	1	33	(0)	1484334
18	0.0	0.0	6.9	chr16	57092565	57092593	(33245752)	+	(GCC)n	Simple_repeat	1	29	(0)	1484335
16	10.9	4.7	4.4	chr16	57168043	57168085	(33170260)	+	(TCCC)n	Simple_repeat	1	45	(0)	1484497
13	9.8	0.0	0.0	chr16	57186403	57186424	(33151921)	+	(CGC)n	Simple_repeat	1	22	(0)	1484533
267	25.6	1.1	9.1	chr16	57266535	57266633	(33071712)	C	L2a	LINE/L2	(264)	3162	3072	1484672
690	19.8	0.0	0.0	chr16	57285059	57285169	(33053176)	+	AluJr	SINE/Alu	1	111	(201)	1484721
365	29.6	0.9	0.9	chr16	57285345	57285453	(33052892)	+	MIRb	SINE/MIR	117	225	(43)	1484722
12	12.2	3.7	0.0	chr16	57372395	57372421	(32965924)	+	(CTCC)n	Simple_repeat	1	28	(0)	1484951
1942	20.6	6.1	0.0	chr16	57422281	57422727	(32915618)	+	L1MB5	LINE/L1	5684	6159	(15)	1485042
168	17.8	2.6	2.5	chr16	57422980	57423364	(32914981)	+	GA-rich	Low_complexity	1	395	(0)	1485043
78	12.3	4.3	0.0	chr16	57475661	57475798	(32862547)	+	(TC)n	Simple_repeat	1	144	(0)	1485138
29	23.6	4.8	1.8	chr16	57479737	57479841	(32858504)	+	(TCCC)n	Simple_repeat	1	110	(0)	1485142
43	0.0	0.0	0.0	chr16	57532699	57532735	(32805610)	+	(AC)n	Simple_repeat	1	37	(0)	1485260
17	3.7	3.3	3.2	chr16	57532822	57532851	(32805494)	+	(GGA)n	Simple_repeat	1	31	(0)	1485261
12	12.0	3.7	0.0	chr16	57536735	57536761	(32801584)	+	G-rich	Low_complexity	1	28	(0)	1485265
2105	13.2	0.0	1.3	chr16	57590130	57590431	(32747914)	C	AluSz6	SINE/Alu	(14)	298	1	1485371
247	26.0	11.2	1.3	chr16	57590433	57590584	(32747761)	+	L1ME3F	LINE/L1	5914	6082	(161)	1485360
229	30.6	4.2	1.2	chr16	57620821	57620956	(32717389)	+	MIR3	SINE/MIR	10	149	(59)	1485439
349	29.1	3.1	0.5	chr16	57863585	57863694	(32474651)	+	MIR3	SINE/MIR	87	194	(14)	1485924
13	10.7	6.7	0.0	chr16	58027757	58027786	(32310559)	+	(CCTGC)n	Simple_repeat	1	32	(0)	1486287
544	28.7	9.7	3.9	chr16	58236215	58236696	(32101649)	C	LTR33	LTR/ERVL	(2)	513	1	1486703
318	33.8	9.6	4.4	chr16	58459041	58459337	(31879008)	+	L2c	LINE/L2	3073	3386	(1)	1487157
271	28.5	11.2	1.2	chr16	58459470	58459629	(31878716)	+	MamSINE1	SINE/tRNA-RTE	111	288	(2)	1487158
3093	28.1	7.5	7.8	chr16	62126501	62127142	(28211203)	C	L1MC4	LINE/L1	(5432)	783	70	1492914
22	11.2	0.0	2.4	chr16	66371909	66371949	(23966396)	+	(CCCTT)n	Simple_repeat	1	41	(0)	1499601
2456	7.4	0.3	0.0	chr16	66478323	66478631	(23859714)	+	AluSc8	SINE/Alu	2	311	(0)	1499820
357	29.1	2.8	6.9	chr16	66478632	66478690	(23859655)	+	MIRc	SINE/MIR	166	220	(48)	1499819
464	26.1	5.7	2.8	chr16	66516691	66516905	(23821440)	C	L2a	LINE/L2	(25)	3401	3133	1499878
15	17.2	2.4	2.4	chr16	66552529	66552569	(23785776)	+	(GCGCGT)n	Simple_repeat	1	42	(0)	1499952
57	11.1	9.1	0.7	chr16	66592240	66592398	(23745947)	+	G-rich	Low_complexity	1	172	(0)	1500013
513	22.9	7.8	6.9	chr16	66592399	66592600	(23745745)	+	HAL1ME	LINE/L1	1397	1600	(865)	1500011
2175	23.3	9.3	3.4	chr16	66629610	66630263	(23708082)	+	MER21C	LTR/ERVL	199	895	(43)	1500075
6871	7.3	3.3	3.2	chr16	66630306	66631930	(23706415)	+	SVA_D	Retroposon/SVA	1	1370	(17)	1500076
73	22.8	3.1	4.9	chr16	66790208	66790466	(23547879)	+	G-rich	Low_complexity	1	267	(0)	1500421
1813	13.4	0.3	1.7	chr16	66863489	66863786	(23474559)	+	AluJo	SINE/Alu	1	294	(18)	1500570
1075	22.8	5.8	15.1	chr16	66863787	66864022	(23474323)	C	L1MC4	LINE/L1	(492)	7550	7369	1500569
851	24.5	4.7	4.4	chr16	66864022	66864084	(23474261)	C	L1ME3A	LINE/L1	(4)	6169	6116	1500571
319	10.8	5.8	3.0	chr16	66873530	66873596	(23464749)	C	MIRc	SINE/MIR	(140)	128	60	1500596
240	9.9	3.5	3.8	chr16	66873628	66874090	(23464255)	+	(CTC)n	Simple_repeat	1	479	(0)	1500597
814	11.9	0.0	0.8	chr16	66879665	66879782	(23458563)	+	AluJo	SINE/Alu	2	118	(194)	1500612
466	31.6	13.7	0.5	chr16	66879815	66880202	(23458143)	C	L2	LINE/L2	(620)	2799	2353	1500613
24	20.6	1.6	1.6	chr16	66960328	66960419	(23377926)	+	(CCCT)n	Simple_repeat	1	92	(0)	1500759
1814	17.5	2.9	0.7	chr16	66960420	66960441	(23377904)	C	AluJo	SINE/Alu	(2)	310	289	1500760
238	10.0	2.4	0.0	chr16	67024896	67024935	(23313410)	+	L1MB7	LINE/L1	6129	6169	(15)	1500910
915	10.0	0.0	5.0	chr16	67091892	67091998	(23246347)	C	AluSp	SINE/Alu	(31)	282	176	1501072
1890	5.8	0.0	7.5	chr16	67092000	67092280	(23246065)	C	L1PA8	LINE/L1	(107)	6065	5806	1501075
13	22.7	2.4	0.0	chr16	67170484	67170524	(23167821)	+	(CCGCCC)n	Simple_repeat	1	42	(0)	1501209
201	33.1	15.3	0.8	chr16	67240550	67240618	(23097727)	C	MER5A	DNA/hAT-Charlie	(73)	116	41	1501299
260	35.8	7.4	1.1	chr16	67241538	67241726	(23096619)	C	L2c	LINE/L2	(6)	3381	3180	1501302
2074	15.4	0.0	0.3	chr16	67276999	67277304	(23061041)	C	AluSz6	SINE/Alu	(7)	305	1	1501365
22	12.0	4.4	0.0	chr16	67431041	67431085	(22907260)	+	(CCCCGC)n	Simple_repeat	1	47	(0)	1501626
12	23.4	0.0	4.5	chr16	67547085	67547128	(22791217)	+	G-rich	Low_complexity	1	44	(0)	1501849
355	35.6	9.4	2.0	chr16	67552544	67552812	(22785533)	C	L2	LINE/L2	(421)	2998	2705	1501860
20	26.9	0.0	2.9	chr16	67562427	67562496	(22775849)	+	(CCCCT)n	Simple_repeat	1	70	(0)	1501890
2106	12.5	1.9	3.0	chr16	67593180	67593542	(22744803)	C	L1PA16	LINE/L1	(3)	6163	5805	1501981
524	22.8	0.0	1.0	chr16	67595239	67595339	(22743006)	C	AluJo	SINE/Alu	(93)	219	120	1501985
18	14.8	7.4	1.7	chr16	67652857	67652910	(22685435)	+	(GCG)n	Simple_repeat	1	58	(0)	1502110
1873	16.5	2.4	0.0	chr16	67941340	67941630	(22396715)	+	AluJo	SINE/Alu	1	298	(14)	1502623
10511	7.7	9.6	0.1	chr16	67998033	67999459	(22338886)	+	LTR12C	LTR/ERV1	3	1579	(0)	1502712
1480	21.6	5.0	0.0	chr16	67999644	67999925	(22338420)	+	AluJr	SINE/Alu	5	301	(11)	1502713
4182	16.6	5.1	2.0	chr16	68267618	68268452	(22069893)	+	MER21B	LTR/ERVL	1	862	(6)	1503260
964	22.2	3.2	12.1	chr16	68327584	68327666	(22010679)	+	MER44A	DNA/TcMar-Tigger	1	84	(255)	1503379
1795	15.2	6.0	0.0	chr16	68327667	68327949	(22010396)	+	AluJb	SINE/Alu	2	302	(10)	1503380
43	19.1	2.9	0.9	chr16	68352062	68352165	(21986180)	+	(TGAG)n	Simple_repeat	1	107	(0)	1503427
15	8.7	0.0	0.0	chr16	68704586	68704610	(21633735)	+	(AGGG)n	Simple_repeat	1	25	(0)	1504108
16	31.3	1.4	1.4	chr16	69106518	69106590	(21231755)	+	(CCCCCTC)n	Simple_repeat	1	74	(0)	1505104
266	30.8	9.5	0.7	chr16	69108299	69108442	(21229903)	C	MIRc	SINE/MIR	(88)	180	23	1505105
1606	26.3	10.1	1.6	chr16	70304737	70305369	(20032976)	C	HAL1	LINE/L1	(1313)	1194	502	1507665
2645	15.5	8.9	8.9	chr16	70453469	70453966	(19884379)	C	MER4A	LTR/ERV1	(215)	449	2	1508027
321	28.2	13.6	2.8	chr16	70453967	70454041	(19884304)	C	L1ME3G	LINE/L1	(417)	507	434	1508026
17	19.3	2.0	3.9	chr16	70686106	70686156	(19652189)	+	GA-rich	Low_complexity	1	52	(0)	1508508
25	19.9	1.5	2.9	chr16	71289614	71289681	(19048664)	+	G-rich	Low_complexity	1	69	(0)	1509393
635	28.2	6.2	7.0	chr16	71289888	71290177	(19048168)	+	L1M5	LINE/L1	5283	5581	(543)	1509394
15	24.6	0.0	0.0	chr16	71884210	71884252	(18454093)	+	(CCTCCC)n	Simple_repeat	1	43	(0)	1510565
23	17.9	1.9	1.8	chr16	73047504	73047557	(17290788)	+	GA-rich	Low_complexity	1	55	(0)	1512327
14	29.8	3.0	2.2	chr16	73059189	73059303	(17279042)	+	GA-rich	Low_complexity	1	115	(0)	1512338
25	12.0	4.4	0.0	chr16	73060495	73060539	(17277806)	+	(TC)n	Simple_repeat	1	47	(0)	1512343
18	0.0	0.0	0.0	chr16	73070711	73070730	(17267615)	+	(TC)n	Simple_repeat	1	20	(0)	1512351
16	0.0	0.0	4.2	chr16	73071405	73071428	(17266917)	+	(GAGG)n	Simple_repeat	1	24	(0)	1512355
17	20.6	2.2	0.0	chr16	73152795	73152839	(17185506)	+	G-rich	Low_complexity	1	46	(0)	1512528
27	25.8	4.7	4.5	chr16	73891495	73891622	(16446723)	+	GA-rich	Low_complexity	1	134	(0)	1513683
13	25.4	1.7	5.1	chr16	73891572	73891629	(16446716)	+	A-rich	Low_complexity	1	59	(0)	1513684
1906	16.0	0.0	0.0	chr16	74118427	74118701	(16219644)	+	AluJo	SINE/Alu	1	275	(37)	1514034
32	24.6	0.8	5.8	chr16	74118702	74118821	(16219524)	+	G-rich	Low_complexity	1	121	(0)	1514035
761	31.6	8.1	2.8	chr16	74271185	74271649	(16066696)	+	LTR78	LTR/ERV1	750	1241	(63)	1514311
14	18.4	4.4	2.1	chr16	74700913	74700957	(15637388)	+	(CCTT)n	Simple_repeat	1	47	(0)	1515259
12	26.5	5.0	1.6	chr16	74985009	74985068	(15353277)	+	(CGC)n	Simple_repeat	1	63	(0)	1515869
12	12.6	0.0	3.6	chr16	74999480	74999507	(15338838)	+	(CCCG)n	Simple_repeat	1	28	(0)	1515909
955	10.7	0.0	1.5	chr16	75115914	75116044	(15222301)	C	FLAM_C	SINE/Alu	(14)	129	1	1516114
208	18.2	12.7	0.0	chr16	75116297	75116351	(15221994)	C	MIRc	SINE/MIR	(99)	169	107	1516115
362	31.0	16.9	0.8	chr16	75266351	75266597	(15071748)	C	L3	LINE/CR1	(124)	3975	3681	1516408
441	27.5	17.9	0.0	chr16	75305483	75305675	(15032670)	+	MIR	SINE/MIR	13	247	(15)	1516502
2186	13.9	0.6	0.3	chr16	75421037	75421376	(14916969)	+	MER61A	LTR/ERV1	1	341	(0)	1516751
1321	12.5	12.0	1.0	chr16	75455549	75455756	(14882589)	+	AluSz6	SINE/Alu	1	234	(78)	1516834
790	26.8	15.5	3.3	chr16	75460384	75460811	(14877534)	+	L2a	LINE/L2	2937	3426	(0)	1516842
853	24.7	6.3	4.1	chr16	75650076	75650514	(14687831)	C	L2a	LINE/L2	(1)	3374	2903	1517230
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
378	30.8	1.6	0.0	chr16	78002861	78002980	(12335365)	+	MamRep4096	DNA/hAT-Tip100	255	376	(50)	1520932
383	31.2	6.9	2.7	chr16	78293111	78293331	(12045014)	+	MIR	SINE/MIR	28	258	(4)	1521465
13	6.5	8.8	2.7	chr16	78745616	78745649	(11592696)	+	A-rich	Low_complexity	1	37	(0)	1522311
21	18.6	0.0	2.1	chr16	78745729	78745775	(11592570)	+	(TCC)n	Simple_repeat	1	47	(0)	1522312
1359	11.6	11.7	0.8	chr16	78788247	78788481	(11549864)	+	MER21A	LTR/ERVL	1	264	(667)	1522410
2256	17.9	5.5	2.3	chr16	78788487	78788926	(11549419)	+	MER21A	LTR/ERVL	376	830	(101)	1522410
247	30.6	0.8	2.8	chr16	79066319	79066479	(11271866)	+	L2b	LINE/L2	3230	3374	(1)	1522902
28	12.8	1.8	1.8	chr16	79066485	79066539	(11271806)	+	GA-rich	Low_complexity	1	56	(0)	1522903
277	25.6	2.8	2.8	chr16	80569868	80570008	(9768337)	C	MER112	DNA/hAT-Charlie	(23)	238	98	1525524
3820	15.6	10.9	0.9	chr16	81033913	81034596	(9303749)	C	MER21B	LTR/ERVL	(107)	761	1	1526344
240	20.2	2.3	7.7	chr16	81738004	81738094	(8600251)	+	MER5B	DNA/hAT-Charlie	20	105	(73)	1527902
254	29.5	0.0	1.3	chr16	81746341	81746419	(8591926)	+	L1M6	LINE/L1	440	517	(5979)	1527925
3470	13.5	9.2	6.7	chr16	81889954	81890480	(8447865)	C	LTR8A	LTR/ERV1	(143)	584	1	1528278
1722	13.2	0.4	7.4	chr16	84143715	84144010	(6194335)	+	AluSz	SINE/Alu	1	275	(37)	1532216
31	16.1	0.0	0.0	chr16	84144038	84144095	(6194250)	+	(CTCCCT)n	Simple_repeat	1	58	(0)	1532217
517	32.7	1.5	1.2	chr16	84144114	84144328	(6194017)	C	MIRb	SINE/MIR	(19)	249	28	1532218
882	29.8	10.3	5.6	chr16	84546772	84547416	(5790929)	C	L2a	LINE/L2	(2)	3424	2741	1533040
278	24.7	13.8	0.0	chr16	84547482	84547562	(5790783)	+	MIRb	SINE/MIR	57	150	(118)	1533041
875	24.7	2.3	4.8	chr16	84616767	84617034	(5721311)	C	L1ME3	LINE/L1	(30)	6132	5872	1533212
77	29.6	3.0	5.7	chr16	84618272	84618768	(5719577)	+	(CCTCTC)n	Simple_repeat	1	512	(0)	1533213
19	9.4	2.9	0.0	chr16	84643396	84643429	(5694916)	+	(CCT)n	Simple_repeat	1	35	(0)	1533280
370	31.2	4.3	0.0	chr16	84691563	84691716	(5646629)	+	MamRep137	DNA/TcMar-Tigger	219	379	(131)	1533400
368	30.8	2.5	1.7	chr16	85057531	85057649	(5280696)	C	L2a	LINE/L2	(9)	3417	3298	1534108
915	12.7	0.0	0.8	chr16	85115299	85115424	(5222921)	+	AluSz	SINE/Alu	1	125	(187)	1534204
658	28.3	11.6	0.2	chr16	85157829	85158242	(5180103)	C	LTR33A	LTR/ERVL	(21)	499	33	1534298
464	30.4	9.7	3.3	chr16	85158249	85158585	(5179760)	C	L2a	LINE/L2	(260)	3115	2745	1534297
417	25.4	2.0	0.0	chr16	85174541	85174655	(5163690)	C	L2a	LINE/L2	(3)	3423	3262	1534328
28	17.5	6.2	1.2	chr16	85202928	85203007	(5135338)	+	(CCTCCT)n	Simple_repeat	1	85	(0)	1534382
30	30.1	2.3	3.0	chr16	85220704	85220835	(5117510)	+	(CT)n	Simple_repeat	1	135	(0)	1534420
723	31.4	6.4	3.8	chr16	85227795	85228329	(5110016)	C	L2b	LINE/L2	(0)	3375	2830	1534438
50	0.0	0.0	0.0	chr16	85235429	85235471	(5102874)	+	(TG)n	Simple_repeat	1	43	(0)	1534454
732	28.7	10.4	4.5	chr16	85312250	85312672	(5025673)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	11	1534612
70	10.8	3.3	0.8	chr16	85312688	85312809	(5025536)	+	(GGA)n	Simple_repeat	1	126	(0)	1534613
21	21.1	5.6	2.0	chr16	85329823	85329952	(5008393)	+	G-rich	Low_complexity	1	134	(0)	1534647
1926	11.4	0.0	1.1	chr16	85350785	85351046	(4987299)	C	AluSx1	SINE/Alu	(20)	292	34	1534691
306	30.5	7.9	9.4	chr16	85351047	85351137	(4987208)	C	MIR	SINE/MIR	(118)	144	60	1534690
359	26.4	0.0	0.0	chr16	85351155	85351241	(4987104)	C	MLT1J1	LTR/ERVL-MaLR	(354)	90	4	1534692
1275	17.4	3.9	7.3	chr16	85351328	85351699	(4986646)	+	L1MB7	LINE/L1	5825	6183	(1)	1534693
1216	24.5	11.0	4.6	chr16	85402930	85403412	(4934933)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	1	1534781
2589	4.3	0.3	0.3	chr16	85552329	85552631	(4785714)	C	AluY	SINE/Alu	(8)	303	1	1535050
21	3.7	0.0	0.0	chr16	85563163	85563190	(4775155)	+	(TCC)n	Simple_repeat	1	28	(0)	1535064
16	5.3	0.0	0.0	chr16	85563190	85563209	(4775136)	+	(T)n	Simple_repeat	1	20	(0)	1535065
218	21.9	0.0	0.0	chr16	85578415	85578455	(4759890)	C	MIRc	SINE/MIR	(118)	150	110	1535092
345	31.8	7.4	0.0	chr16	85578486	85578636	(4759709)	C	MIRc	SINE/MIR	(50)	218	56	1535093
390	31.3	11.5	4.8	chr16	85579848	85580179	(4758166)	C	L2a	LINE/L2	(3)	3423	3016	1535096
27	0.0	0.0	0.0	chr16	85611307	85611332	(4727013)	+	(CCCCTC)n	Simple_repeat	1	26	(0)	1535143
243	33.1	2.7	4.7	chr16	85692464	85692563	(4645782)	C	MER5A	DNA/hAT-Charlie	(53)	136	36	1535221
487	24.8	0.0	0.0	chr16	85692780	85692884	(4645461)	+	L1MC3	LINE/L1	6500	6604	(1181)	1535226
114	23.4	5.1	4.7	chr16	85716249	85716734	(4621611)	+	GA-rich	Low_complexity	1	511	(0)	1535286
724	24.6	3.3	0.5	chr16	85753451	85753658	(4584687)	C	MER20	DNA/hAT-Charlie	(5)	214	1	1535377
16	13.1	0.0	0.0	chr16	85987749	85987819	(4350526)	+	(C)n	Simple_repeat	1	71	(0)	1535808
261	26.0	16.3	2.3	chr16	85987935	85988107	(4350238)	+	L1M5	LINE/L1	5617	5818	(376)	1535809
391	22.9	12.5	0.0	chr16	86252764	86252903	(4085442)	+	LTR50	LTR/ERVL	43	202	(593)	1536322
853	24.8	8.4	2.1	chr16	86252995	86253281	(4085064)	+	LTR50	LTR/ERVL	379	761	(34)	1536322
212	31.2	9.2	5.2	chr16	86467545	86467659	(3870686)	C	MER5A	DNA/hAT-Charlie	(19)	170	51	1536721
514	30.5	4.4	0.6	chr16	86467833	86468007	(3870338)	+	MER5A	DNA/hAT-Charlie	7	188	(1)	1536722
12	14.9	8.1	0.0	chr16	86510202	86510238	(3828107)	+	(CGGCCT)n	Simple_repeat	1	40	(0)	1536781
14	29.0	3.2	1.6	chr16	86510251	86510312	(3828033)	+	G-rich	Low_complexity	1	64	(0)	1536782
14	13.0	5.9	0.0	chr16	86510351	86510384	(3827961)	+	G-rich	Low_complexity	1	36	(0)	1536782
27	3.5	0.0	0.0	chr16	86510482	86510511	(3827834)	+	(TCC)n	Simple_repeat	1	30	(0)	1536783
19	20.8	1.7	1.7	chr16	86510512	86510563	(3827782)	+	(CGGCGG)n	Simple_repeat	6	57	(0)	1536784
28	5.3	2.6	0.0	chr16	86510605	86510643	(3827702)	+	(CGG)n	Simple_repeat	1	40	(0)	1536785
26	0.0	0.0	0.0	chr16	86564519	86564543	(3773802)	+	(TGTT)n	Simple_repeat	1	25	(0)	1536857
14	8.1	0.0	3.6	chr16	86567211	86567238	(3771107)	+	(CCTCC)n	Simple_repeat	1	28	(0)	1536860
292	21.9	2.4	4.7	chr16	87363841	87363926	(2974419)	+	MIR3	SINE/MIR	119	202	(6)	1538299
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
40	2.5	0.0	0.0	chr16	87492912	87492952	(2845393)	+	(CGGCGA)n	Simple_repeat	1	41	(0)	1538508
17	23.1	5.4	2.6	chr16	87602043	87602068	(2736277)	+	G-rich	Low_complexity	1	55	(23)	1538760
14	15.8	0.0	5.1	chr16	87602069	87602107	(2736238)	+	(GGCGCGA)n	Simple_repeat	1	39	(0)	1538761
340	26.4	7.7	0.7	chr16	87765329	87765473	(2572872)	C	MIRc	SINE/MIR	(111)	157	2	1539012
14	9.7	5.7	2.7	chr16	87765480	87765514	(2572831)	+	GA-rich	Low_complexity	1	37	(0)	1539013
250	32.7	4.1	1.0	chr16	87930262	87930394	(2407951)	C	MIR1_Amn	SINE/MIR	(59)	149	15	1539340
416	28.1	9.1	8.1	chr16	87930607	87930735	(2407610)	C	MER102b	DNA/hAT-Charlie	(54)	276	147	1539341
15	24.0	4.9	1.6	chr16	87951382	87951442	(2386903)	+	(GCGCG)n	Simple_repeat	1	64	(0)	1539393
555	26.5	6.2	3.2	chr16	88459289	88459486	(1878859)	+	MIR	SINE/MIR	1	203	(65)	1539988
83	26.6	2.0	3.3	chr16	88459509	88459807	(1878538)	+	(CCCCCT)n	Simple_repeat	1	305	(0)	1539989
278	19.8	18.0	4.8	chr16	88510157	88510279	(1828066)	C	MIRb	SINE/MIR	(116)	152	12	1540045
30	14.2	4.7	4.4	chr16	88561979	88562064	(1776281)	+	(CCATCCC)n	Simple_repeat	1	90	(0)	1540124
460	20.4	10.9	1.3	chr16	88660211	88660359	(1677986)	+	L1MD1	LINE/L1	918	1082	(5551)	1540279
20	5.9	2.7	2.6	chr16	88672748	88672784	(1665561)	+	(AGGGG)n	Simple_repeat	1	38	(0)	1540311
12	5.0	0.0	4.3	chr16	88685756	88685778	(1652567)	+	(AGGG)n	Simple_repeat	1	23	(0)	1540329
12	27.6	0.0	0.0	chr16	88685927	88685965	(1652380)	+	(CCCT)n	Simple_repeat	1	39	(0)	1540330
14	17.7	2.0	5.9	chr16	88761719	88761768	(1576577)	+	(CCTCCC)n	Simple_repeat	1	51	(0)	1540399
15	23.0	0.0	5.4	chr16	89167665	89167720	(1170625)	+	(GCCCCCA)n	Simple_repeat	1	56	(0)	1540854
551	27.6	1.8	9.6	chr16	89216288	89216536	(1121809)	+	LTR55	LTR/ERVL?	144	372	(176)	1540931
249	36.8	11.0	0.0	chr16	89216717	89216966	(1121379)	C	L1MC4a	LINE/L1	(1117)	5029	4749	1540919
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
11	16.9	2.9	2.8	chr16	89489367	89489401	(848944)	+	(CCGCCA)n	Simple_repeat	1	36	(0)	1541347
13	32.4	1.6	1.5	chr16	89586869	89586932	(751413)	+	GA-rich	Low_complexity	1	65	(0)	1541507
18	25.4	4.8	4.6	chr16	89613438	89613540	(724805)	+	(TCCC)n	Simple_repeat	1	108	(0)	1541546
29	0.0	0.0	0.0	chr16	89784709	89784735	(553610)	+	(GGGGAA)n	Simple_repeat	1	27	(0)	1541844
37	16.8	1.3	1.3	chr16	89828931	89829007	(509338)	+	(CTCC)n	Simple_repeat	1	78	(0)	1541935
1283	18.1	0.5	1.4	chr17	567671	567886	(82689555)	+	AluJr4	SINE/Alu	67	280	(32)	1545399
29	3.2	0.0	0.0	chr17	567889	567920	(82689521)	+	(AGGGG)n	Simple_repeat	1	32	(0)	1545400
15	14.9	2.6	2.5	chr17	1229521	1229559	(82027882)	+	(CGCTCC)n	Simple_repeat	1	40	(0)	1546622
13	11.6	0.0	6.2	chr17	1455572	1455603	(81801838)	+	(TGCCC)n	Simple_repeat	1	32	(0)	1547171
214	24.4	19.9	2.5	chr17	1488449	1488614	(81768827)	C	MIRb	SINE/MIR	(35)	233	39	1547238
227	26.6	18.6	0.0	chr17	1490874	1491016	(81766425)	+	L2c	LINE/L2	3028	3198	(177)	1547242
17	10.8	10.8	4.2	chr17	1562588	1562652	(81694789)	+	(CGGCC)n	Simple_repeat	1	72	(0)	1547358
644	33.3	14.0	3.8	chr17	1830274	1830765	(81426676)	+	L2a	LINE/L2	1721	2290	(1129)	1547919
1082	13.7	6.8	1.4	chr17	1960543	1960801	(81296640)	C	L1MB5	LINE/L1	(1)	6183	5910	1548172
354	30.5	18.8	4.7	chr17	1960802	1961145	(81296296)	+	L2a	LINE/L2	3021	3424	(2)	1548170
31	14.6	2.4	5.8	chr17	2025349	2025433	(81232008)	+	(CCTC)n	Simple_repeat	1	87	(0)	1548316
335	30.8	13.6	0.0	chr17	2041271	2041429	(81216012)	+	MIR	SINE/MIR	17	200	(62)	1548339
22	8.1	0.0	6.7	chr17	2085260	2085304	(81172137)	+	(GGAG)n	Simple_repeat	1	45	(0)	1548402
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
17	22.6	0.0	2.1	chr17	2337839	2337886	(80919555)	+	G-rich	Low_complexity	1	48	(0)	1548931
736	20.8	0.0	0.0	chr17	2347642	2347766	(80909675)	C	FLAM_A	SINE/Alu	(10)	132	8	1548952
221	23.7	7.8	0.0	chr17	2382619	2382677	(80874764)	+	L2b	LINE/L2	3296	3359	(16)	1549001
22	15.5	5.7	4.0	chr17	2594105	2594174	(80663267)	+	(TCC)n	Simple_repeat	1	74	(0)	1549534
341	25.9	10.1	3.0	chr17	2750082	2750266	(80507175)	+	MIR3	SINE/MIR	33	238	(30)	1549848
353	30.1	5.5	0.0	chr17	2786212	2786314	(80471127)	C	MIR3	SINE/MIR	(68)	140	32	1549946
2270	10.5	0.3	1.3	chr17	2848499	2848813	(80408628)	C	AluSx1	SINE/Alu	(0)	312	1	1550096
13	21.2	2.6	0.0	chr17	2848872	2848925	(80408516)	+	(CCCTTCC)n	Simple_repeat	1	55	(0)	1550097
15	22.9	8.1	1.2	chr17	2924522	2924595	(80332846)	+	GA-rich	Low_complexity	1	80	(0)	1550262
2364	10.0	0.7	0.0	chr17	2959844	2960152	(80297289)	+	AluSx	SINE/Alu	1	311	(1)	1550329
15	13.8	0.0	2.9	chr17	2960228	2960261	(80297180)	+	G-rich	Low_complexity	1	34	(0)	1550330
1914	27.2	9.1	3.2	chr17	2975257	2975506	(80281935)	+	L1MEi	LINE/L1	2073	2387	(3759)	1550361
533	25.3	20.1	1.9	chr17	2975525	2975946	(80281495)	+	LTR79	LTR/ERVL	10	514	(13)	1550364
2156	12.4	1.0	0.3	chr17	3843537	3843842	(79413599)	C	AluSx	SINE/Alu	(3)	309	2	1551853
252	32.0	7.6	4.8	chr17	3890427	3890656	(79366785)	+	L2b	LINE/L2	2351	2587	(832)	1551945
12	23.1	0.0	4.5	chr17	3893402	3893445	(79363996)	+	(GGCGA)n	Simple_repeat	1	44	(0)	1551951
476	25.7	13.4	0.4	chr17	3935302	3935528	(79321913)	+	MLT1K	LTR/ERVL-MaLR	1	261	(334)	1552034
707	23.0	6.4	1.4	chr17	4186437	4186643	(79070798)	C	HAL1	LINE/L1	(106)	2401	2184	1552481
26	12.8	3.9	0.0	chr17	4186681	4186731	(79070710)	+	(TCC)n	Simple_repeat	1	53	(0)	1552482
14	21.1	0.0	2.5	chr17	4366693	4366753	(78890688)	+	(CCCG)n	Simple_repeat	1	59	(0)	1552867
337	28.3	15.6	1.2	chr17	4480998	4481326	(78776115)	C	L2	LINE/L2	(1430)	1989	1605	1553183
16	19.6	5.6	1.8	chr17	4710664	4710717	(78546724)	+	(AGCG)n	Simple_repeat	1	57	(0)	1553589
12	19.7	2.3	4.4	chr17	4710763	4710806	(78546635)	+	G-rich	Low_complexity	1	45	(0)	1553590
200	26.1	11.9	0.0	chr17	4719940	4720058	(78537383)	C	L2a	LINE/L2	(457)	2962	2828	1553601
213	27.7	9.8	2.9	chr17	4721542	4721645	(78535796)	+	L2c	LINE/L2	3273	3384	(3)	1553604
2334	9.5	0.0	0.0	chr17	4817677	4817972	(78439469)	+	AluY	SINE/Alu	1	296	(15)	1553844
14	22.9	5.8	0.0	chr17	4818213	4818264	(78439177)	+	G-rich	Low_complexity	1	55	(0)	1553845
722	16.5	1.7	0.0	chr17	4847900	4848014	(78409427)	+	AluJo	SINE/Alu	1	117	(195)	1553912
19	16.5	4.0	1.9	chr17	4848025	4848074	(78409367)	+	GA-rich	Low_complexity	1	52	(0)	1553913
13	14.3	4.8	4.5	chr17	4879976	4880017	(78377424)	+	(CCCT)n	Simple_repeat	1	44	(0)	1553987
18	19.4	0.0	0.0	chr17	4948969	4949009	(78308432)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	1554113
27	23.3	6.0	3.5	chr17	4997900	4998033	(78259408)	+	(CCCGCCG)n	Simple_repeat	1	142	(0)	1554195
2352	8.2	2.3	0.3	chr17	5030000	5030303	(78227138)	+	AluSx	SINE/Alu	2	311	(1)	1554250
1820	16.6	0.0	4.3	chr17	5030498	5030823	(78226618)	C	AluJo	SINE/Alu	(0)	312	1	1554251
2542	15.0	23.9	1.2	chr17	5110749	5111335	(78146106)	C	MER4CL34	LTR/ERV1	(3)	762	1	1554453
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
18	10.4	0.0	0.0	chr17	6444345	6444375	(76813066)	+	(GGGGCG)n	Simple_repeat	1	31	(0)	1557111
427	5.9	0.0	0.0	chr17	6444509	6444559	(76812882)	C	AluSp	SINE/Alu	(37)	276	226	1557112
274	18.4	0.0	0.0	chr17	6444520	6444568	(76812873)	+	SVA_C	Retroposon/SVA	336	384	(1000)	1557113
19	4.3	0.0	0.0	chr17	6554970	6554993	(76702448)	+	(CA)n	Simple_repeat	1	24	(0)	1557317
12	27.7	0.0	0.0	chr17	7043786	7043824	(76213617)	+	G-rich	Low_complexity	1	39	(0)	1558118
207	38.9	4.8	4.0	chr17	7046056	7046280	(76211161)	+	L2	LINE/L2	2850	3076	(343)	1558124
13	24.8	2.3	0.0	chr17	7207299	7207341	(76050100)	+	G-rich	Low_complexity	1	44	(0)	1558449
18	0.0	0.0	0.0	chr17	7207349	7207371	(76050070)	+	(AGCC)n	Simple_repeat	1	23	(0)	1558450
12	23.3	7.3	0.0	chr17	7214009	7214063	(76043378)	+	(CCTTTTC)n	Simple_repeat	1	59	(0)	1558465
13	16.7	2.7	2.6	chr17	7441161	7441197	(75816244)	+	(CTCCCTC)n	Simple_repeat	1	38	(0)	1558829
31	28.2	2.5	1.6	chr17	7561967	7562077	(75695364)	+	(GGC)n	Simple_repeat	1	145	(0)	1559082
11	22.0	2.2	4.3	chr17	7573782	7573827	(75683614)	+	(GCGAGG)n	Simple_repeat	1	47	(0)	1559097
2488	8.7	0.0	0.3	chr17	7765767	7766076	(75491365)	C	AluSc	SINE/Alu	(0)	309	1	1559485
13	22.5	2.0	3.9	chr17	7835734	7835783	(75421658)	+	(CACGCC)n	Simple_repeat	1	51	(0)	1559620
18	4.5	0.0	0.0	chr17	7838448	7838470	(75418971)	+	(CA)n	Simple_repeat	1	23	(0)	1559623
12	10.4	6.1	2.9	chr17	7842563	7842595	(75414846)	+	(AGAGTG)n	Simple_repeat	1	35	(0)	1559627
16	24.0	3.9	1.9	chr17	7842709	7842759	(75414682)	+	(GT)n	Simple_repeat	1	53	(0)	1559628
2342	10.1	0.0	1.3	chr17	7862456	7862771	(75394670)	+	AluSq2	SINE/Alu	1	312	(1)	1559646
22	0.0	0.0	0.0	chr17	7884072	7884095	(75373346)	+	(AC)n	Simple_repeat	1	24	(0)	1559695
12	16.8	0.0	5.4	chr17	7887462	7887498	(75369943)	+	G-rich	Low_complexity	1	37	(0)	1559704
16	13.5	0.0	8.3	chr17	7887728	7887775	(75369666)	+	(CTCCGCC)n	Simple_repeat	1	48	(0)	1559705
213	12.7	8.3	11.3	chr17	8016847	8016908	(75240533)	C	MER91C	DNA/hAT-Tip100	(23)	117	58	1559943
15	20.8	1.8	5.4	chr17	8019216	8019270	(75238171)	+	(TCCC)n	Simple_repeat	1	56	(0)	1559949
361	27.6	11.0	6.1	chr17	8074330	8074622	(75182819)	+	L2b	LINE/L2	2446	2754	(665)	1560041
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
14	3.4	5.9	5.6	chr17	8121292	8121325	(75136116)	+	(ACTGGG)n	Simple_repeat	1	36	(0)	1560132
994	5.5	4.5	0.0	chr17	8153872	8153998	(75103443)	+	AluSp	SINE/Alu	1	133	(180)	1560183
19	8.1	0.0	0.0	chr17	8160726	8160751	(75096690)	+	(AC)n	Simple_repeat	1	26	(0)	1560196
15	18.9	0.0	2.6	chr17	8160882	8160920	(75096521)	+	GA-rich	Low_complexity	1	39	(0)	1560197
313	27.6	14.6	1.3	chr17	8160921	8161074	(75096367)	+	MIR3	SINE/MIR	19	196	(12)	1560198
2045	10.4	2.5	0.0	chr17	8182252	8182530	(75074911)	+	AluSg	SINE/Alu	2	287	(23)	1560249
29	18.3	1.4	2.7	chr17	8182531	8182602	(75074839)	+	G-rich	Low_complexity	1	73	(0)	1560250
472	16.7	2.0	0.0	chr17	8182623	8182718	(75074723)	C	L1MC5	LINE/L1	(89)	9215	9118	1560251
2651	21.4	10.2	3.3	chr17	8182725	8183544	(75073897)	C	L1MC5a	LINE/L1	(319)	2458	1576	1560252
239	36.3	0.8	1.6	chr17	8185825	8185950	(75071491)	+	MER5B	DNA/hAT-Charlie	54	178	(0)	1560262
2182	10.9	0.0	5.8	chr17	8196733	8197062	(75060379)	C	AluSq2	SINE/Alu	(2)	311	1	1560286
465	28.9	2.0	3.9	chr17	8197162	8197253	(75060188)	+	MER5B	DNA/hAT-Charlie	27	116	(62)	1560287
2528	7.0	0.0	1.0	chr17	8197254	8197565	(75059876)	C	AluY	SINE/Alu	(2)	309	1	1560288
19	23.1	5.2	3.7	chr17	8210229	8210305	(75047136)	+	GA-rich	Low_complexity	1	81	(0)	1560323
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
653	0.0	0.0	0.0	chr17	8222238	8222309	(75035132)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	1560360
290	35.2	2.5	5.4	chr17	8249565	8249732	(75007709)	C	L2a	LINE/L2	(0)	3426	3264	1560405
610	31.7	17.3	2.2	chr17	8249796	8250593	(75006848)	C	L2a	LINE/L2	(0)	3426	2465	1560406
13	17.6	0.0	6.8	chr17	8295543	8295586	(74961855)	+	(TCCGGC)n	Simple_repeat	1	44	(0)	1560494
270	31.2	6.2	4.4	chr17	8324139	8324373	(74933068)	C	L2a	LINE/L2	(184)	3242	3000	1560557
15	31.5	0.0	1.6	chr17	8435787	8435850	(74821591)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1560832
52	3.7	0.0	0.0	chr17	8746832	8746887	(74510554)	+	(TTCCC)n	Simple_repeat	1	56	(0)	1561385
360	36.2	5.8	1.5	chr17	8746902	8747165	(74510276)	+	L1M5	LINE/L1	4497	4772	(1374)	1561386
864	32.9	14.0	2.0	chr17	9140855	9141779	(74115662)	C	L2	LINE/L2	(713)	2706	1654	1562145
2539	21.6	9.3	3.6	chr17	9386061	9386470	(73870971)	+	L1ME2	LINE/L1	6493	6910	(114)	1562599
31	18.3	2.6	1.3	chr17	9386522	9386597	(73870844)	+	(AGGC)n	Simple_repeat	1	78	(0)	1562608
286	32.3	9.5	4.8	chr17	9386615	9386845	(73870596)	C	L3	LINE/CR1	(2)	4097	3855	1562609
33	0.0	0.0	0.0	chr17	10178703	10178733	(73078708)	+	(T)n	Simple_repeat	1	31	(0)	1564196
104	28.7	4.0	1.0	chr17	10755604	10755974	(72501467)	+	(CTCTCC)n	Simple_repeat	1	386	(0)	1565209
208	19.1	3.2	7.1	chr17	13416078	13416163	(69841278)	C	L2b	LINE/L2	(6)	3381	3301	1569755
3140	14.9	3.5	0.4	chr17	13751099	13751598	(69505843)	+	LTR72	LTR/ERV1	4	519	(0)	1570286
65	5.3	7.3	1.5	chr17	15502710	15502832	(67754609)	+	(TC)n	Simple_repeat	1	132	(0)	1573165
1751	14.3	1.7	3.4	chr17	15503121	15503414	(67754027)	+	AluJo	SINE/Alu	1	289	(23)	1573166
559	30.3	9.2	1.6	chr17	16313710	16314021	(66943420)	+	L4_A_Mam	LINE/RTE-X	4549	4886	(104)	1574678
15	22.1	0.0	5.7	chr17	16381261	16381313	(66876128)	+	G-rich	Low_complexity	1	53	(0)	1574858
299	24.7	3.3	0.0	chr17	17045143	17045231	(66212210)	C	MIR3	SINE/MIR	(10)	198	107	1576019
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
21	10.0	0.0	0.0	chr17	17568823	17568855	(65688586)	+	(TCC)n	Simple_repeat	1	33	(0)	1576870
16	11.6	0.0	0.0	chr17	17580080	17580108	(65677333)	+	(GAGGG)n	Simple_repeat	1	29	(0)	1576894
2259	8.5	0.3	0.0	chr17	17580218	17580499	(65676942)	+	AluSx4	SINE/Alu	21	303	(7)	1576895
2219	10.7	0.0	0.0	chr17	17621069	17621377	(65636064)	+	AluSx	SINE/Alu	1	309	(3)	1576991
58	23.2	0.0	3.4	chr17	17621379	17621526	(65635915)	+	GA-rich	Low_complexity	1	148	(0)	1576992
48	0.0	0.0	0.0	chr17	17686569	17686609	(65570832)	+	(GT)n	Simple_repeat	1	41	(0)	1577160
1310	16.4	12.4	0.0	chr17	17707069	17707287	(65550154)	+	AluJo	SINE/Alu	42	291	(21)	1577202
984	21.1	4.5	2.3	chr17	17707308	17707599	(65549842)	C	L2a	LINE/L2	(182)	3244	2945	1577201
306	16.7	1.0	12.7	chr17	17710824	17710933	(65546508)	C	MIR3	SINE/MIR	(86)	122	26	1577209
13	8.3	3.6	3.5	chr17	17725409	17725436	(65532005)	+	GA-rich	Low_complexity	1	29	(0)	1577233
13	8.1	0.0	6.7	chr17	17782016	17782045	(65475396)	+	(GGGA)n	Simple_repeat	1	30	(0)	1577343
316	26.8	2.3	11.1	chr17	17785951	17786185	(65471256)	+	MER102a	DNA/hAT-Charlie	66	279	(51)	1577352
1875	12.4	4.8	0.7	chr17	17833701	17833982	(65423459)	+	AluSx	SINE/Alu	1	294	(18)	1577437
19	0.0	4.2	0.0	chr17	17834028	17834051	(65423390)	+	(AG)n	Simple_repeat	1	25	(0)	1577438
293	26.7	4.8	1.6	chr17	17834069	17834103	(65423338)	+	L1ME4a	LINE/L1	5999	6033	(91)	1577439
1781	16.4	1.7	0.3	chr17	17834104	17834389	(65423052)	C	AluJr	SINE/Alu	(22)	290	1	1577440
289	33.4	14.9	1.9	chr17	17835886	17836193	(65421248)	+	L2b	LINE/L2	3003	3357	(18)	1577444
324	26.4	11.7	0.0	chr17	17838596	17838701	(65418740)	+	MIRb	SINE/MIR	37	156	(112)	1577448
188	27.6	2.6	6.2	chr17	17850271	17850351	(65407090)	C	MamRTE1	LINE/RTE-BovB	(3165)	647	570	1577459
412	32.2	8.6	4.0	chr17	17919036	17919258	(65338183)	+	MIRb	SINE/MIR	4	237	(31)	1577572
2844	19.2	10.7	1.8	chr17	17958670	17959343	(65298098)	+	MER21B	LTR/ERVL	1	741	(127)	1577660
14	24.9	1.3	7.6	chr17	18117221	18117298	(65140143)	+	GA-rich	Low_complexity	1	79	(0)	1577976
307	31.5	7.0	0.1	chr17	18117359	18117467	(65139974)	C	MIRc	SINE/MIR	(76)	154	40	1577977
2430	8.1	0.0	2.8	chr17	18217154	18217473	(65039968)	+	AluSc8	SINE/Alu	1	311	(0)	1578172
386	26.3	4.3	2.9	chr17	18318221	18318357	(64939084)	+	MIR3	SINE/MIR	37	175	(33)	1578346
13	16.7	0.0	5.3	chr17	18850889	18850926	(64406515)	+	(CAGGCCT)n	Simple_repeat	1	38	(0)	1579253
283	24.5	11.7	9.0	chr17	18855953	18856118	(64401323)	C	MLT1K	LTR/ERVL-MaLR	(24)	571	401	1579268
253	25.6	10.6	7.0	chr17	18856137	18856308	(64401133)	C	MLT1K	LTR/ERVL-MaLR	(266)	329	151	1579268
15	15.4	2.6	2.6	chr17	18967338	18967375	(64290066)	+	GA-rich	Low_complexity	1	39	(0)	1579524
190	28.0	2.1	8.8	chr17	18967452	18967553	(64289888)	C	L2	LINE/L2	(348)	3071	2977	1579525
208	23.1	3.0	5.8	chr17	19295752	19295820	(63961621)	+	MER5B	DNA/hAT-Charlie	50	116	(62)	1580364
263	18.5	8.5	0.0	chr17	19301815	19301868	(63955573)	+	L2a	LINE/L2	3277	3335	(91)	1580381
220	28.8	1.8	9.8	chr17	19301958	19302080	(63955361)	+	MIRc	SINE/MIR	46	158	(72)	1580382
12	19.5	0.0	8.3	chr17	19378660	19378707	(63878734)	+	(CCCCT)n	Simple_repeat	1	48	(0)	1580495
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
2548	12.2	8.4	2.7	chr17	19646653	19647241	(63610200)	C	MER4-int	LTR/ERV1	(5912)	686	1	1581021
2658	10.4	9.0	1.4	chr17	19647245	19647663	(63609778)	C	MER4C	LTR/ERV1	(0)	465	12	1581021
7805	15.0	10.6	1.6	chr17	19787660	19789960	(63467481)	+	L1M1	LINE/L1	21	2537	(5028)	1581259
14	21.8	0.0	4.3	chr17	19867617	19867662	(63389779)	+	(GGCCC)n	Simple_repeat	1	46	(0)	1581430
242	21.4	6.7	1.4	chr17	20922525	20922595	(62334846)	+	MLT-int	LTR/ERVL-MaLR	686	760	(975)	1583340
468	29.8	5.0	9.6	chr17	20922680	20923175	(62334266)	C	L1MEg	LINE/L1	(4880)	1204	737	1583341
6436	22.6	6.4	0.9	chr17	21036056	21037755	(62219686)	+	L1MC3	LINE/L1	5819	7618	(167)	1583502
14	25.2	3.5	3.3	chr17	21040698	21040755	(62216686)	+	GA-rich	Low_complexity	1	60	(0)	1583511
2238	10.2	0.0	0.0	chr17	21040888	21041182	(62216259)	C	AluSg	SINE/Alu	(15)	295	1	1583512
35	34.1	2.8	4.7	chr17	21042336	21042586	(62214855)	+	G-rich	Low_complexity	1	258	(0)	1583514
15	30.1	5.8	2.8	chr17	21042490	21042592	(62214849)	+	GA-rich	Low_complexity	1	109	(0)	1583515
720	25.3	8.4	2.0	chr17	21273418	21273668	(61983773)	+	MLT1G	LTR/ERVL-MaLR	1	318	(277)	1583983
180	23.5	0.0	10.5	chr17	21286663	21286719	(61970722)	+	MamTip2	DNA/hAT-Tip100	150	200	(105)	1584009
289	28.9	13.6	0.7	chr17	21361168	21361320	(61896121)	C	L2b	LINE/L2	(5)	3370	3195	1584146
738	27.4	5.1	2.8	chr17	27245528	27245775	(56011666)	+	LTR79	LTR/ERVL	274	527	(0)	1586370
18	6.8	3.2	0.0	chr17	27456279	27456309	(55801132)	+	(GGGAG)n	Simple_repeat	1	32	(0)	1586829
16	17.4	5.0	0.0	chr17	27516513	27516552	(55740889)	+	(CCT)n	Simple_repeat	1	42	(0)	1586952
254	20.3	0.0	4.5	chr17	27516560	27516626	(55740815)	C	L1ME4a	LINE/L1	(0)	6124	6061	1586953
213	29.7	11.9	0.0	chr17	27546198	27546271	(55711170)	C	L2b	LINE/L2	(24)	3351	3268	1587009
948	27.4	4.4	6.7	chr17	28251763	28251889	(55005552)	+	L2a	LINE/L2	3058	3185	(241)	1588333
754	14.8	0.0	3.0	chr17	28251890	28252024	(55005417)	+	AluJo	SINE/Alu	1	131	(181)	1588334
388	30.0	8.4	0.8	chr17	28406430	28406560	(54850881)	C	MIR	SINE/MIR	(3)	259	118	1588606
657	31.7	6.6	1.1	chr17	28525112	28525398	(54732043)	+	Tigger19b	DNA/TcMar-Tigger	246	549	(1)	1588851
12	25.6	2.4	0.0	chr17	28552222	28552263	(54705178)	+	G-rich	Low_complexity	1	43	(0)	1588900
389	31.4	16.8	0.3	chr17	28552900	28553186	(54704255)	+	L2a	LINE/L2	3059	3405	(21)	1588902
14	19.5	0.0	2.6	chr17	28705340	28705377	(54552064)	+	(TCCTCCC)n	Simple_repeat	1	38	(0)	1589172
26	19.0	2.3	5.6	chr17	28710974	28711060	(54546381)	+	G-rich	Low_complexity	1	89	(0)	1589185
13	33.8	2.4	2.4	chr17	28727120	28727201	(54530240)	+	G-rich	Low_complexity	1	84	(0)	1589204
18	23.0	0.0	5.9	chr17	28745551	28745618	(54511823)	+	(CCCCTC)n	Simple_repeat	1	68	(0)	1589235
2159	6.0	0.3	7.0	chr17	28786895	28787223	(54470218)	C	AluY	SINE/Alu	(0)	311	1	1589319
477	30.9	10.0	3.1	chr17	28901943	28902451	(54354990)	+	L2b	LINE/L2	2661	3214	(161)	1589591
12	17.1	4.9	2.3	chr17	28905835	28905875	(54351566)	+	G-rich	Low_complexity	1	43	(0)	1589598
15	20.4	0.0	0.0	chr17	28951010	28951038	(54306403)	+	G-rich	Low_complexity	1	29	(0)	1589655
16	24.6	0.0	3.6	chr17	29140433	29140488	(54116953)	+	(GCCCC)n	Simple_repeat	1	56	(0)	1589957
220	29.6	0.0	0.7	chr17	29177036	29177115	(54080326)	+	MIRc	SINE/MIR	61	141	(127)	1590033
294	24.7	1.2	3.4	chr17	29177179	29177266	(54080175)	+	MIR3	SINE/MIR	45	130	(138)	1590034
13	22.8	3.6	3.5	chr17	29293104	29293158	(53964283)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	1590286
18	18.9	3.5	3.3	chr17	29293713	29293774	(53963667)	+	(CCCCATC)n	Simple_repeat	1	62	(0)	1590287
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
478	24.4	12.2	0.6	chr17	29295111	29295283	(53962158)	+	L1ME3B	LINE/L1	6021	6216	(26)	1590290
2259	16.4	6.9	0.0	chr17	29295294	29295714	(53961727)	C	L1MB3	LINE/L1	(0)	6183	5732	1590291
13	17.0	3.0	0.0	chr17	29589693	29589725	(53667716)	+	(CCCCG)n	Simple_repeat	1	34	(0)	1590971
13	25.9	3.2	3.1	chr17	29589778	29589840	(53667601)	+	(GGCCGC)n	Simple_repeat	1	65	(0)	1590972
432	22.6	5.7	2.2	chr17	29598186	29598321	(53659120)	+	MamRep4096	DNA/hAT-Tip100	9	149	(277)	1590976
1993	14.4	0.3	0.3	chr17	30787718	30788008	(52469433)	+	AluSx	SINE/Alu	1	291	(21)	1593272
2418	9.8	0.7	0.0	chr17	30788047	30788353	(52469088)	+	AluSc8	SINE/Alu	1	309	(2)	1593273
531	34.4	3.1	2.6	chr17	30921600	30921826	(52335615)	C	MIRc	SINE/MIR	(24)	244	17	1593607
3714	11.2	0.8	12.2	chr17	30961258	30961468	(52295973)	+	LTR43	LTR/ERV1	1	159	(443)	1593708
2223	12.2	0.0	0.3	chr17	30961469	30961763	(52295678)	C	AluSx	SINE/Alu	(18)	294	1	1593709
388	33.9	9.7	6.8	chr17	31109685	31109859	(52147582)	C	L3	LINE/CR1	(1647)	2452	2285	1594021
760	17.1	8.1	0.6	chr17	31659425	31659583	(51597858)	C	MLT1A	LTR/ERVL-MaLR	(218)	172	1	1595037
21	24.8	0.0	1.7	chr17	31937083	31937140	(51320301)	+	(CCTTC)n	Simple_repeat	1	58	(0)	1595692
12	17.5	3.1	0.0	chr17	32298929	32298960	(50958481)	+	(GAGGT)n	Simple_repeat	1	33	(0)	1596495
16	0.0	0.0	0.0	chr17	32299047	32299063	(50958378)	+	(T)n	Simple_repeat	1	17	(0)	1596496
17	12.7	0.0	0.0	chr17	32303640	32303665	(50953776)	+	(T)n	Simple_repeat	1	26	(0)	1596508
17	12.9	4.3	4.2	chr17	32519391	32519436	(50738005)	+	GA-rich	Low_complexity	1	48	(0)	1596957
18	29.4	2.5	1.2	chr17	32519470	32519549	(50737892)	+	(GGCGGC)n	Simple_repeat	1	82	(0)	1596958
367	33.2	4.0	6.1	chr17	32933780	32934114	(50323327)	C	L2b	LINE/L2	(117)	3270	2947	1597655
209	37.7	2.0	1.0	chr17	33175711	33175911	(50081530)	+	L2c	LINE/L2	2648	2850	(569)	1598121
412	29.9	8.1	2.7	chr17	34401367	34401539	(48855902)	+	MIR	SINE/MIR	13	200	(68)	1600315
292	34.2	16.3	4.2	chr17	34498910	34499877	(48757564)	C	L2c	LINE/L2	(185)	3202	2110	1600510
18	19.8	3.7	1.8	chr17	34579591	34579644	(48677797)	+	(CGG)n	Simple_repeat	1	56	(0)	1600678
7575	16.3	3.6	0.7	chr17	35368236	35369590	(47887851)	+	L1MA1	LINE/L1	188	1584	(5981)	1602147
13	8.7	4.0	0.0	chr17	35373878	35373902	(47883539)	+	(CTAT)n	Simple_repeat	1	26	(0)	1602150
697	26.6	11.1	0.0	chr17	35747390	35747581	(47509860)	+	MamRep1879	DNA/hAT-Tip100?	1	216	(0)	1602713
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
318	22.9	16.7	0.0	chr17	38896270	38896374	(44361067)	C	MIR3	SINE/MIR	(11)	197	72	1608834
381	33.5	1.4	5.2	chr17	38896610	38896839	(44360602)	C	MIRc	SINE/MIR	(18)	250	30	1608835
16	22.7	5.7	2.7	chr17	39197704	39197773	(44059668)	+	(CCCG)n	Simple_repeat	1	74	(0)	1609528
461	32.9	6.9	0.0	chr17	39209372	39209520	(44047921)	+	MIRb	SINE/MIR	88	247	(21)	1609551
236	26.3	4.8	3.2	chr17	39235600	39235724	(44021717)	C	L2a	LINE/L2	(93)	3333	3187	1609595
1194	18.9	10.7	1.6	chr17	39335859	39336112	(43921329)	+	AluJr	SINE/Alu	1	280	(32)	1609825
13	22.7	2.3	2.3	chr17	39401721	39401763	(43855678)	+	(GGC)n	Simple_repeat	1	44	(0)	1610001
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
575	32.4	5.3	1.4	chr17	39619738	39619953	(43637488)	C	MIRb	SINE/MIR	(10)	258	34	1610475
525	29.5	4.5	3.0	chr17	39628876	39629074	(43628367)	+	MIR3	SINE/MIR	7	208	(0)	1610489
376	28.5	4.2	7.6	chr17	39644381	39644551	(43612890)	C	MIRb	SINE/MIR	(20)	248	84	1610511
314	31.5	4.0	5.3	chr17	39653891	39654041	(43603400)	C	MIRc	SINE/MIR	(118)	150	2	1610534
32	6.4	1.9	1.9	chr17	39654147	39654198	(43603243)	+	(TTCA)n	Simple_repeat	1	53	(0)	1610535
18	7.8	0.0	0.0	chr17	39699994	39700020	(43557421)	+	(AGG)n	Simple_repeat	1	27	(0)	1610614
15	16.3	0.0	2.8	chr17	39700742	39700777	(43556664)	+	(CCCTCC)n	Simple_repeat	1	36	(0)	1610615
1281	15.4	2.9	0.5	chr17	39702107	39702307	(43555134)	+	AluJb	SINE/Alu	86	291	(21)	1610617
305	21.5	14.1	1.1	chr17	39750090	39750213	(43507228)	C	MIRb	SINE/MIR	(118)	150	5	1610710
2637	4.9	0.3	0.0	chr17	39933454	39933757	(43323684)	+	AluY	SINE/Alu	2	306	(5)	1611026
16	15.0	6.5	2.0	chr17	39933787	39933832	(43323609)	+	(CCT)n	Simple_repeat	1	49	(0)	1611027
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
14	20.2	5.7	1.8	chr17	40017715	40017767	(43239674)	+	(CTCCACC)n	Simple_repeat	1	56	(0)	1611199
13	24.4	0.0	4.3	chr17	40017896	40017942	(43239499)	+	GA-rich	Low_complexity	1	47	(0)	1611200
552	28.8	3.9	4.7	chr17	40017964	40018196	(43239245)	C	L2b	LINE/L2	(0)	3375	3145	1611201
21	14.4	0.0	0.0	chr17	40059874	40059912	(43197529)	+	(GGGA)n	Simple_repeat	1	39	(0)	1611283
12	10.0	0.0	0.0	chr17	40065047	40065068	(43192373)	+	(TTCT)n	Simple_repeat	1	22	(0)	1611292
16	23.6	0.0	0.0	chr17	40069008	40069042	(43188399)	+	(GT)n	Simple_repeat	1	35	(0)	1611299
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
20	13.3	0.0	4.4	chr17	40111892	40111936	(43145505)	+	(TCTCCC)n	Simple_repeat	1	45	(0)	1611366
232	33.8	0.0	0.0	chr17	40111947	40112017	(43145424)	C	MER131	DNA?	(139)	76	6	1611367
181	14.7	0.0	2.9	chr17	40124253	40124287	(43133154)	+	X9_LINE	LINE/L1	36	69	(867)	1611396
51	19.4	2.6	0.8	chr17	40124316	40124432	(43133009)	+	(TCTC)n	Simple_repeat	1	120	(0)	1611397
16	3.8	3.5	3.3	chr17	40321423	40321451	(42935990)	+	(GGA)n	Simple_repeat	1	30	(0)	1611824
13	9.1	8.1	2.5	chr17	40341938	40341977	(42915464)	+	(TTCCTCC)n	Simple_repeat	1	42	(0)	1611855
19	30.7	2.2	2.1	chr17	40342076	40342166	(42915275)	+	G-rich	Low_complexity	1	93	(0)	1611856
19	3.4	3.3	0.0	chr17	40476227	40476256	(42781185)	+	(GGGTGG)n	Simple_repeat	1	31	(0)	1612126
70	0.0	0.0	0.0	chr17	40476370	40476429	(42781012)	+	(GT)n	Simple_repeat	1	60	(0)	1612127
195	33.7	4.5	1.1	chr17	40499491	40499577	(42757864)	C	MIR3	SINE/MIR	(84)	124	35	1612181
55	0.0	0.0	0.0	chr17	40533544	40533590	(42723851)	+	(TG)n	Simple_repeat	1	47	(0)	1612257
249	31.7	6.1	1.6	chr17	41544495	41544619	(41712822)	C	L2b	LINE/L2	(0)	3375	3245	1613785
241	29.2	5.3	3.6	chr17	41549207	41549316	(41708125)	+	MIR3	SINE/MIR	12	123	(85)	1613795
184	30.4	2.8	4.2	chr17	41665811	41665882	(41591559)	+	L2c	LINE/L2	3316	3386	(1)	1613989
24	9.5	0.0	0.0	chr17	41675133	41675166	(41582275)	+	(GT)n	Simple_repeat	1	34	(0)	1614016
2788	16.3	4.3	3.0	chr17	41675224	41675426	(41582015)	+	LTR26C	LTR/ERV1	1	204	(335)	1614017
13	13.2	6.7	4.2	chr17	41777682	41777726	(41479715)	+	(AGGCTG)n	Simple_repeat	1	48	(0)	1614274
12	7.5	6.7	3.1	chr17	41786139	41786168	(41471273)	+	G-rich	Low_complexity	1	32	(0)	1614291
187	25.0	0.0	0.0	chr17	41801851	41801898	(41455543)	C	MIR3	SINE/MIR	(60)	148	101	1614330
310	30.2	17.2	2.8	chr17	41864167	41864702	(41392739)	+	L2b	LINE/L2	2728	3358	(17)	1614461
15	17.9	3.0	7.3	chr17	41864751	41864816	(41392625)	+	(GCCCTCC)n	Simple_repeat	1	68	(0)	1614462
121	14.7	0.6	8.1	chr17	41904115	41904420	(41353021)	+	GA-rich	Low_complexity	14	296	(0)	1614546
2105	12.1	3.3	0.3	chr17	41920318	41920615	(41336826)	+	AluSz6	SINE/Alu	1	307	(5)	1614564
15	15.3	4.3	4.1	chr17	42053920	42053966	(41203475)	+	G-rich	Low_complexity	1	49	(0)	1614847
388	32.1	6.9	4.8	chr17	42078847	42079062	(41178379)	+	MIRc	SINE/MIR	7	217	(51)	1614897
17	21.6	4.9	1.6	chr17	42242115	42242175	(41015266)	+	G-rich	Low_complexity	1	64	(0)	1615217
946	16.8	0.0	0.0	chr17	42403074	42403228	(40854213)	C	AluJr	SINE/Alu	(18)	294	140	1615565
21	23.8	3.9	4.7	chr17	42423106	42423207	(40834234)	+	(GGAGCG)n	Simple_repeat	1	106	(0)	1615601
2293	7.4	2.0	3.6	chr17	42458284	42458592	(40798849)	+	AluSg	SINE/Alu	1	304	(6)	1615701
17	9.3	2.8	2.7	chr17	42458826	42458861	(40798580)	+	(GCGGGG)n	Simple_repeat	1	37	(0)	1615702
430	28.7	0.8	1.6	chr17	42536759	42536882	(40720559)	+	MIRb	SINE/MIR	67	189	(79)	1615846
243	29.1	6.7	1.0	chr17	42566382	42566479	(40690962)	+	MIRb	SINE/MIR	13	114	(148)	1615903
1860	12.0	0.0	0.0	chr17	42574781	42575047	(40682394)	C	AluSz	SINE/Alu	(39)	273	7	1615913
917	19.4	3.1	9.6	chr17	42575252	42575490	(40681951)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	1615914
17	12.1	0.0	5.0	chr17	42609505	42609544	(40647897)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	1615974
13	20.2	0.0	2.7	chr17	42659145	42659181	(40598260)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1616103
20	6.5	3.0	0.0	chr17	42675094	42675126	(40582315)	+	(CCCTCC)n	Simple_repeat	1	34	(0)	1616127
12	16.5	7.0	2.2	chr17	42678109	42678151	(40579290)	+	(GCGGCC)n	Simple_repeat	1	46	(0)	1616133
27	14.6	1.9	0.0	chr17	42678337	42678389	(40579052)	+	G-rich	Low_complexity	1	54	(0)	1616134
38	21.3	9.5	0.6	chr17	42682577	42682724	(40574717)	+	GA-rich	Low_complexity	1	162	(0)	1616146
13	27.5	1.9	1.8	chr17	42744733	42744786	(40512655)	+	(CCCCGC)n	Simple_repeat	1	55	(0)	1616276
19	9.2	6.0	3.8	chr17	42761382	42761431	(40496010)	+	G-rich	Low_complexity	1	53	(0)	1616315
15	10.0	0.0	0.0	chr17	42797348	42797369	(40460072)	+	(CT)n	Simple_repeat	1	22	(0)	1616376
658	7.1	0.0	0.0	chr17	42997924	42998007	(40259434)	C	HY4	scRNA	(9)	84	1	1616846
19	4.5	0.0	0.0	chr17	43021607	43021629	(40235812)	+	(G)n	Simple_repeat	1	23	(0)	1616897
379	29.8	0.7	5.4	chr17	43031636	43031784	(40225657)	+	Tigger19a	DNA/TcMar-Tigger	132	273	(50)	1616912
1679	6.6	0.0	4.9	chr17	43032062	43032246	(40225195)	C	AluSc	SINE/Alu	(0)	309	133	1616913
309	24.0	1.0	5.9	chr17	43034516	43034617	(40222824)	C	UCON88	Unknown	(1)	111	15	1616921
32	0.0	0.0	0.0	chr17	43124748	43124777	(40132664)	+	(TTTTG)n	Simple_repeat	1	30	(0)	1617143
1660	4.5	5.2	0.0	chr17	43124782	43124980	(40132461)	C	AluSx	SINE/Alu	(37)	275	66	1617144
12	10.9	0.0	8.6	chr17	43168888	43168922	(40088519)	+	A-rich	Low_complexity	1	35	(0)	1617232
2254	7.9	3.3	0.0	chr17	43169176	43169465	(40087976)	C	AluSg	SINE/Alu	(9)	301	2	1617233
381	30.2	6.5	11.8	chr17	43388857	43389213	(39868228)	+	L2c	LINE/L2	3050	3386	(1)	1617686
16	0.0	0.0	0.0	chr17	43399525	43399541	(39857900)	+	(A)n	Simple_repeat	1	17	(0)	1617717
535	24.3	5.5	0.0	chr17	43407617	43407752	(39849689)	+	MIR3	SINE/MIR	58	201	(7)	1617734
477	27.6	8.0	4.6	chr17	43554865	43555058	(39702383)	C	MIR3	SINE/MIR	(4)	204	4	1618090
188	20.9	2.3	0.0	chr17	43562811	43562853	(39694588)	C	L3b	LINE/CR1	(216)	5016	4973	1618109
192	28.6	9.7	6.2	chr17	43656212	43656420	(39601021)	C	L2c	LINE/L2	(239)	3148	2932	1618338
17	19.5	7.4	0.0	chr17	43679665	43679718	(39577723)	+	GA-rich	Low_complexity	1	58	(0)	1618385
864	29.3	3.7	0.8	chr17	43702743	43703007	(39554434)	+	MLT1K	LTR/ERVL-MaLR	89	361	(234)	1618440
20	27.4	1.2	3.5	chr17	43833206	43833289	(39424152)	+	G-rich	Low_complexity	1	85	(0)	1618680
1179	24.6	11.4	2.0	chr17	43846513	43846956	(39410485)	C	Charlie4a	DNA/hAT-Charlie	(16)	492	2	1618716
470	25.5	5.0	3.8	chr17	43904634	43904792	(39352649)	C	MIRc	SINE/MIR	(72)	196	36	1618827
15	22.1	0.0	2.3	chr17	43953983	43954026	(39303415)	+	G-rich	Low_complexity	1	44	(0)	1618916
2143	10.8	0.7	0.3	chr17	44013378	44013682	(39243759)	+	AluSx1	SINE/Alu	1	306	(6)	1619059
227	28.3	1.0	12.4	chr17	44013683	44013726	(39243715)	C	MIRc	SINE/MIR	(173)	95	58	1619058
18	19.6	0.0	0.0	chr17	44086972	44087006	(39170435)	+	G-rich	Low_complexity	1	35	(0)	1619199
386	29.7	1.7	0.0	chr17	44103254	44103371	(39154070)	C	UCON82	Unknown	(2)	146	27	1619234
13	12.0	10.6	1.9	chr17	44168426	44168472	(39088969)	+	G-rich	Low_complexity	1	52	(0)	1619378
13	18.3	2.6	2.5	chr17	44199081	44199119	(39058322)	+	(GCCGG)n	Simple_repeat	1	40	(0)	1619428
14	14.9	5.4	0.0	chr17	44199251	44199287	(39058154)	+	(GCCCC)n	Simple_repeat	1	39	(0)	1619429
22	25.1	3.0	0.0	chr17	44199958	44200024	(39057417)	+	(CCT)n	Simple_repeat	1	69	(0)	1619433
12	22.4	3.5	5.1	chr17	44200421	44200477	(39056964)	+	(CTCCC)n	Simple_repeat	1	59	(0)	1619434
18	4.8	0.0	0.0	chr17	44218595	44218616	(39038825)	+	(A)n	Simple_repeat	1	22	(0)	1619460
20	20.1	0.0	5.2	chr17	44219770	44219827	(39037614)	+	GA-rich	Low_complexity	1	58	(0)	1619465
14	21.1	0.0	6.1	chr17	44219884	44219932	(39037509)	+	(CGCC)n	Simple_repeat	1	49	(0)	1619466
11	21.7	0.0	4.9	chr17	44363084	44363124	(38894317)	+	(CCCTCC)n	Simple_repeat	1	41	(0)	1619783
13	31.1	5.4	2.1	chr17	44548195	44548286	(38709155)	+	GA-rich	Low_complexity	1	97	(0)	1620189
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
12	13.9	9.8	3.6	chr17	44599684	44599734	(38657707)	+	GA-rich	Low_complexity	1	56	(0)	1620294
17	0.0	3.1	6.1	chr17	44913991	44914023	(38343418)	+	(CCTCC)n	Simple_repeat	1	32	(0)	1620977
12	21.1	2.9	0.0	chr17	45013330	45013363	(38244078)	+	(CTCC)n	Simple_repeat	1	35	(0)	1621176
421	27.7	9.0	1.4	chr17	45051053	45051195	(38206246)	C	MIR	SINE/MIR	(80)	182	28	1621258
330	28.3	10.3	4.0	chr17	45052314	45052486	(38204955)	C	MIRb	SINE/MIR	(21)	247	63	1621260
320	25.3	3.9	0.0	chr17	45073783	45073878	(38183563)	+	MIR3	SINE/MIR	79	175	(33)	1621313
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
20	10.0	0.0	0.0	chr17	45172715	45172747	(38084694)	+	(GGGGA)n	Simple_repeat	1	33	(0)	1621483
53	15.0	4.5	0.0	chr17	45197575	45197685	(38059756)	+	GA-rich	Low_complexity	1	116	(0)	1621570
15	23.3	0.0	0.0	chr17	45228978	45229017	(38028424)	+	GA-rich	Low_complexity	1	40	(0)	1621646
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
1300	3.2	0.0	0.0	chr17	45277155	45277308	(37980133)	C	L1PA4	LINE/L1	(2)	6153	6000	1621707
20	29.1	1.9	4.7	chr17	46950307	46950411	(36307030)	+	GA-rich	Low_complexity	1	107	(0)	1625037
12	24.1	0.0	2.4	chr17	46979203	46979243	(36278198)	+	(GGAGCA)n	Simple_repeat	1	41	(0)	1625086
14	19.5	0.0	6.4	chr17	46979291	46979337	(36278104)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1625087
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
13	20.8	0.0	0.0	chr17	47100432	47100464	(36156977)	+	(TGTC)n	Simple_repeat	1	33	(0)	1625333
191	30.8	0.0	6.0	chr17	47275960	47276042	(35981399)	+	X9_LINE	LINE/L1	820	897	(39)	1625712
59	11.2	6.9	3.2	chr17	47400569	47400713	(35856728)	+	(CTTCC)n	Simple_repeat	1	155	(0)	1625908
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
16	15.2	0.0	7.8	chr17	47821812	47821862	(35435579)	+	(CTCCCCT)n	Simple_repeat	1	51	(0)	1626785
13	13.1	0.0	0.0	chr17	47896243	47896267	(35361174)	+	(CGG)n	Simple_repeat	1	25	(0)	1626911
2965	22.8	10.9	4.3	chr17	47901849	47902745	(35354696)	C	L2a	LINE/L2	(0)	3426	2444	1626916
2287	7.6	0.3	0.0	chr17	47940611	47940912	(35316529)	+	AluSx1	SINE/Alu	4	306	(6)	1626988
13	25.2	0.0	5.3	chr17	47940959	47941015	(35316426)	+	(TTCCTTC)n	Simple_repeat	1	57	(0)	1626989
12	19.4	0.0	5.1	chr17	47987679	47987717	(35269724)	+	(CTCC)n	Simple_repeat	1	39	(0)	1627065
11	22.8	1.9	5.7	chr17	48003410	48003461	(35253980)	+	G-rich	Low_complexity	1	53	(0)	1627099
229	29.3	0.0	0.0	chr17	48024509	48024566	(35232875)	+	MIRb	SINE/MIR	120	177	(91)	1627148
201	21.4	0.0	0.0	chr17	48050092	48050133	(35207308)	C	Penelope1_Vert	LINE/Penelope	(693)	394	353	1627190
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
11	24.0	2.6	0.0	chr17	48254915	48254953	(35002488)	+	(TTTTGT)n	Simple_repeat	1	40	(0)	1627541
15	19.0	4.8	0.0	chr17	48541859	48541900	(34715541)	+	(TCCC)n	Simple_repeat	1	44	(0)	1628076
13	28.3	1.7	3.3	chr17	48546772	48546830	(34710611)	+	GA-rich	Low_complexity	1	60	(0)	1628081
14	6.9	9.7	0.0	chr17	48547552	48547584	(34709857)	+	GA-rich	Low_complexity	1	36	(0)	1628082
16	28.3	0.0	0.0	chr17	48548322	48548372	(34709069)	+	(TTTTT)n	Simple_repeat	1	51	(0)	1628083
65	12.5	4.7	0.8	chr17	48555273	48555400	(34702041)	+	GA-rich	Low_complexity	1	134	(0)	1628090
26	20.3	0.0	0.0	chr17	48555970	48556020	(34701421)	+	(CA)n	Simple_repeat	1	51	(0)	1628092
29	22.1	2.9	0.0	chr17	48568599	48568667	(34688774)	+	(AC)n	Simple_repeat	1	71	(0)	1628104
19	18.0	5.8	0.0	chr17	48568728	48568779	(34688662)	+	GA-rich	Low_complexity	1	55	(0)	1628105
31	20.7	1.6	0.0	chr17	48569019	48569082	(34688359)	+	(CT)n	Simple_repeat	1	65	(0)	1628106
25	7.9	2.5	0.0	chr17	48577529	48577568	(34679873)	+	(CCT)n	Simple_repeat	1	41	(0)	1628112
30	18.1	5.2	1.2	chr17	48604820	48604896	(34652545)	+	(TC)n	Simple_repeat	1	81	(0)	1628133
13	16.1	5.7	0.0	chr17	48612063	48612097	(34645344)	+	(GCCTG)n	Simple_repeat	1	37	(0)	1628142
38	23.7	4.2	3.4	chr17	48612615	48612756	(34644685)	+	GA-rich	Low_complexity	1	148	(0)	1628143
57	29.1	1.7	0.0	chr17	48615214	48615385	(34642056)	+	GA-rich	Low_complexity	1	175	(0)	1628150
17	15.4	0.0	2.6	chr17	48626805	48626842	(34630599)	+	G-rich	Low_complexity	1	38	(0)	1628158
13	28.3	1.8	1.7	chr17	48647332	48647388	(34610053)	+	G-rich	Low_complexity	1	58	(0)	1628177
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
186	30.0	11.2	5.9	chr17	48759185	48759386	(34498055)	+	L2c	LINE/L2	2649	2862	(557)	1628415
400	22.8	17.7	7.6	chr17	48759443	48759613	(34497828)	C	L2c	LINE/L2	(0)	3387	3196	1628416
12	20.5	0.0	2.8	chr17	48869730	48869765	(34387676)	+	GA-rich	Low_complexity	1	36	(0)	1628687
255	7.7	2.5	0.0	chr17	48869962	48870000	(34387441)	+	L1MD2	LINE/L1	6297	6336	(23)	1628688
14	19.8	4.2	2.0	chr17	48895577	48895624	(34361817)	+	(TCCCC)n	Simple_repeat	1	50	(0)	1628753
385	29.9	5.1	6.2	chr17	48974097	48974274	(34283167)	+	MIRc	SINE/MIR	2	177	(91)	1628953
26	3.1	3.0	0.0	chr17	48991211	48991243	(34266198)	+	(AGGGGC)n	Simple_repeat	1	34	(0)	1629003
20	3.5	3.3	0.0	chr17	49003778	49003807	(34253634)	+	(GGGA)n	Simple_repeat	1	31	(0)	1629013
17	4.5	0.0	4.0	chr17	49003973	49003997	(34253444)	+	(AG)n	Simple_repeat	1	25	(0)	1629014
13	0.0	0.0	4.8	chr17	49012642	49012662	(34244779)	+	(CCT)n	Simple_repeat	1	21	(0)	1629030
749	20.8	3.7	1.3	chr17	49012736	49012894	(34244547)	C	AluJb	SINE/Alu	(14)	298	136	1629031
922	27.4	12.4	3.9	chr17	49087642	49088074	(34169367)	+	LTR16C	LTR/ERVL	5	479	(10)	1629190
379	30.2	9.3	0.2	chr17	49191589	49191799	(34065642)	C	L1ME4b	LINE/L1	(2222)	555	316	1629399
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
13	12.0	3.7	0.0	chr17	49361350	49361376	(33896065)	+	GA-rich	Low_complexity	1	28	(0)	1629783
12	7.2	2.9	8.3	chr17	49362226	49362260	(33895181)	+	GA-rich	Low_complexity	1	36	(0)	1629784
16	16.4	4.9	0.0	chr17	49362245	49362285	(33895156)	+	(GCGC)n	Simple_repeat	1	43	(0)	1629785
12	28.7	0.0	2.1	chr17	49362266	49362313	(33895128)	+	(CGCCCC)n	Simple_repeat	1	48	(0)	1629786
466	24.6	2.5	0.8	chr17	49496989	49497107	(33760334)	C	MIR3	SINE/MIR	(68)	140	20	1630055
251	30.9	11.2	10.6	chr17	49557301	49557611	(33699830)	C	L2a	LINE/L2	(5)	3421	3109	1630151
375	34.3	4.4	1.7	chr17	49557605	49557782	(33699659)	C	L2a	LINE/L2	(504)	2915	2733	1630151
18	6.3	0.0	7.7	chr17	49576728	49576766	(33680675)	+	(TCCC)n	Simple_repeat	1	39	(0)	1630190
29	20.6	0.0	1.6	chr17	49678022	49678084	(33579357)	+	(AC)n	Simple_repeat	1	63	(0)	1630372
18	24.8	0.0	1.9	chr17	49678139	49678192	(33579249)	+	(CCCCT)n	Simple_repeat	1	54	(0)	1630373
180	33.6	7.8	6.9	chr17	49695190	49695480	(33561961)	C	L2b	LINE/L2	(338)	3081	2788	1630409
219	26.8	5.3	1.4	chr17	49880857	49880928	(33376513)	C	MIRc	SINE/MIR	(109)	159	85	1630747
13	14.2	0.0	5.7	chr17	49953139	49953173	(33304268)	+	G-rich	Low_complexity	1	35	(0)	1630876
32	11.0	8.4	1.3	chr17	49995335	49995412	(33262029)	+	(CT)n	Simple_repeat	1	83	(0)	1630947
37	0.0	0.0	0.0	chr17	49995434	49995465	(33261976)	+	(AC)n	Simple_repeat	1	32	(0)	1630948
13	26.9	4.3	2.7	chr17	50053132	50053201	(33204240)	+	(TCTCCA)n	Simple_repeat	1	73	(0)	1631079
16	4.5	0.0	0.0	chr17	50112503	50112525	(33144916)	+	(GGCA)n	Simple_repeat	1	23	(0)	1631176
607	27.1	6.0	1.4	chr17	50114884	50115108	(33142333)	+	MIRc	SINE/MIR	21	268	(0)	1631180
16	22.0	2.0	2.0	chr17	50151187	50151236	(33106205)	+	(CCCTC)n	Simple_repeat	1	51	(0)	1631242
37	0.0	0.0	0.0	chr17	50169415	50169446	(33087995)	+	(AC)n	Simple_repeat	1	32	(0)	1631273
16	21.7	3.1	4.5	chr17	50211088	50211151	(33046290)	+	(CTCC)n	Simple_repeat	1	66	(0)	1631318
291	26.1	4.3	2.3	chr17	50211197	50211321	(33046120)	+	MIR3	SINE/MIR	45	168	(40)	1631319
2077	7.4	4.6	0.7	chr17	50273997	50274265	(32983176)	C	AluSx1	SINE/Alu	(30)	282	3	1631444
15	12.5	2.6	5.0	chr17	50274336	50274374	(32983067)	+	(CCTC)n	Simple_repeat	1	40	(0)	1631445
524	27.0	10.1	2.4	chr17	50276739	50276983	(32980458)	C	L2a	LINE/L2	(50)	3376	3064	1631450
920	22.6	10.2	4.6	chr17	50443368	50443692	(32813749)	C	Arthur1C	DNA/hAT-Tip100	(0)	363	19	1631794
189	29.7	8.4	15.6	chr17	50547442	50547788	(32709653)	+	L2c	LINE/L2	3056	3387	(0)	1632014
199	31.8	6.0	6.7	chr17	50556442	50556576	(32700865)	C	L3b	LINE/CR1	(199)	5033	4900	1632026
12	27.1	0.0	2.2	chr17	50560616	50560661	(32696780)	+	(GGCGCGC)n	Simple_repeat	1	46	(0)	1632032
16	10.8	0.0	3.1	chr17	50570810	50570841	(32686600)	+	(AGGGGG)n	Simple_repeat	1	32	(0)	1632048
307	34.4	4.9	9.7	chr17	50661650	50661887	(32595554)	C	L2b	LINE/L2	(0)	3375	3150	1632203
991	33.9	11.3	2.3	chr17	50681088	50681818	(32575623)	+	L2a	LINE/L2	1282	2105	(1314)	1632236
17	8.9	0.0	0.0	chr17	50683344	50683367	(32574074)	+	(A)n	Simple_repeat	1	24	(0)	1632241
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
435	31.3	15.3	1.9	chr17	50875133	50875347	(32382094)	+	MIRc	SINE/MIR	5	253	(15)	1632629
2191	11.3	0.3	0.0	chr17	50911089	50911380	(32346061)	+	AluSx	SINE/Alu	1	293	(19)	1632716
25	10.8	0.0	0.0	chr17	50915496	50915536	(32341905)	+	(CTCCC)n	Simple_repeat	1	41	(0)	1632726
2189	11.5	0.3	0.0	chr17	50915537	50915824	(32341617)	C	AluSx1	SINE/Alu	(22)	290	2	1632727
720	24.4	12.2	7.7	chr17	50948479	50948625	(32308816)	+	Charlie18a	DNA/hAT-Charlie	16	174	(168)	1632796
34	0.0	0.0	0.0	chr17	51166116	51166144	(32091297)	+	(TG)n	Simple_repeat	1	29	(0)	1633281
569	23.3	5.1	0.6	chr17	51439273	51439427	(31818014)	C	MIR	SINE/MIR	(30)	232	76	1633791
12	10.2	0.0	10.3	chr17	55422139	55422177	(27835264)	+	G-rich	Low_complexity	1	39	(0)	1639594
35	7.0	0.0	0.0	chr17	56593365	56593410	(26664031)	+	(CGC)n	Simple_repeat	1	46	(0)	1641535
16	17.0	0.0	0.0	chr17	56593482	56593514	(26663927)	+	(CGC)n	Simple_repeat	1	33	(0)	1641536
14	0.0	4.8	0.0	chr17	56755085	56755105	(26502336)	+	(GACA)n	Simple_repeat	1	22	(0)	1641906
14	17.2	2.4	2.4	chr17	57131184	57131224	(26126217)	+	(CCACCCC)n	Simple_repeat	1	42	(0)	1642708
295	21.0	11.5	1.0	chr17	57131265	57131365	(26126076)	+	MER5A1	DNA/hAT-Charlie	52	164	(2)	1642709
30	26.3	1.1	1.7	chr17	57256433	57256521	(26000920)	+	G-rich	Low_complexity	1	88	(0)	1642979
16	18.6	0.0	2.9	chr17	57257428	57257461	(25999980)	+	(TC)n	Simple_repeat	1	34	(0)	1642981
15	0.0	8.3	0.0	chr17	57295483	57295506	(25961935)	+	(ATT)n	Simple_repeat	1	26	(0)	1643028
24	13.6	0.0	0.0	chr17	57471866	57471907	(25785534)	+	(GAGGA)n	Simple_repeat	1	42	(0)	1643333
254	28.3	14.5	0.0	chr17	57606924	57607029	(25650412)	+	MIRb	SINE/MIR	19	142	(126)	1643531
12	25.6	2.4	0.0	chr17	57609312	57609353	(25648088)	+	(CCTCC)n	Simple_repeat	1	43	(0)	1643535
15	0.0	0.0	0.0	chr17	57783306	57783324	(25474117)	+	(AGC)n	Simple_repeat	1	19	(0)	1643833
2246	12.4	0.0	0.3	chr17	57871642	57871948	(25385493)	+	AluSx	SINE/Alu	1	306	(6)	1644014
12	24.8	0.0	2.5	chr17	57875676	57875715	(25381726)	+	GA-rich	Low_complexity	1	40	(0)	1644018
2124	11.8	0.3	3.5	chr17	57931990	57932303	(25325138)	+	AluSx	SINE/Alu	1	304	(8)	1644140
16	17.2	2.6	0.0	chr17	57956653	57956691	(25300750)	+	(TCTCCTC)n	Simple_repeat	1	40	(0)	1644191
21	16.2	2.0	2.0	chr17	58083200	58083251	(25174190)	+	(CCCTCC)n	Simple_repeat	1	52	(0)	1644417
15	19.1	5.3	3.3	chr17	58084143	58084199	(25173242)	+	(GGCC)n	Simple_repeat	1	60	(0)	1644418
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
13	19.1	0.0	0.0	chr17	59106906	59106935	(24150506)	+	G-rich	Low_complexity	1	30	(0)	1646445
18	6.7	6.2	0.0	chr17	59365806	59365837	(23891604)	+	(GGA)n	Simple_repeat	1	34	(0)	1647086
325	22.6	1.6	0.0	chr17	59367143	59367204	(23890237)	C	L2b	LINE/L2	(1)	3374	3312	1647088
704	19.6	15.2	0.5	chr17	59367394	59367583	(23889858)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	1647089
408	23.2	1.2	0.0	chr17	59521481	59521562	(23735879)	C	LTR88b	LTR/Gypsy?	(11)	826	744	1647429
269	27.9	0.0	0.0	chr17	59521784	59521844	(23735597)	C	LTR88b	LTR/Gypsy?	(418)	398	338	1647429
14	16.9	2.3	4.4	chr17	60102666	60102709	(23154732)	+	(GGCCGCG)n	Simple_repeat	1	45	(0)	1648573
18	21.5	0.0	7.3	chr17	60102710	60102730	(23154711)	+	(GGC)n	Simple_repeat	4	68	(0)	1648574
353	24.5	7.8	7.8	chr17	60102889	60103003	(23154438)	+	L1M5	LINE/L1	5573	5687	(437)	1648575
15	21.1	0.0	0.0	chr17	60145456	60145475	(23111966)	+	(C)n	Simple_repeat	1	47	(0)	1648668
17	0.0	7.4	0.0	chr17	60145476	60145502	(23111939)	+	(CCCCT)n	Simple_repeat	1	29	(0)	1648669
2177	12.1	0.7	0.3	chr17	60333318	60333622	(22923819)	+	AluSz	SINE/Alu	1	306	(6)	1649018
31	20.9	7.6	0.6	chr17	60333626	60333745	(22923696)	+	GA-rich	Low_complexity	1	128	(0)	1649019
4307	14.8	4.6	0.3	chr17	60333746	60334520	(22922921)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(225)	843	34	1649017
851	24.5	5.6	3.7	chr17	60371811	60372158	(22885283)	+	HAL1	LINE/L1	1953	2307	(200)	1649108
325	29.1	5.0	3.8	chr17	60372163	60372287	(22885154)	+	HAL1	LINE/L1	2348	2477	(30)	1649108
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
267	20.0	1.6	1.6	chr17	60819611	60819671	(22437770)	C	LTR33	LTR/ERVL	(7)	508	448	1650106
19	16.8	4.0	1.9	chr17	60819711	60819760	(22437681)	+	(CCTCC)n	Simple_repeat	1	52	(0)	1650107
896	20.1	0.7	0.0	chr17	60819777	60819925	(22437516)	C	AluJr	SINE/Alu	(25)	287	138	1650108
353	24.1	14.5	4.5	chr17	61003063	61003327	(22254114)	C	HAL1	LINE/L1	(1233)	1274	979	1650379
38	4.8	0.0	0.0	chr17	61003373	61003416	(22254025)	+	(CCCTC)n	Simple_repeat	1	44	(0)	1650380
16	9.5	5.9	0.0	chr17	61003420	61003453	(22253988)	+	(TTTTC)n	Simple_repeat	1	36	(0)	1650381
754	17.1	0.0	1.6	chr17	61003461	61003589	(22253852)	C	AluSz6	SINE/Alu	(181)	131	5	1650382
909	25.6	3.7	3.4	chr17	61312418	61312737	(21944704)	C	UCON8	DNA	(231)	884	564	1650852
31	0.0	0.0	0.0	chr17	61504760	61504788	(21752653)	+	(AAAC)n	Simple_repeat	1	29	(0)	1651154
355	32.1	8.2	1.4	chr17	61504789	61504892	(21752549)	+	L2	LINE/L2	2479	2594	(825)	1651153
312	31.4	4.1	1.4	chr17	61505018	61505159	(21752282)	+	LTR85b	LTR/Gypsy?	1	146	(638)	1651155
181	31.1	5.1	2.6	chr17	62470836	62470911	(20786530)	+	L2c	LINE/L2	3279	3356	(31)	1653056
12	11.6	6.9	0.0	chr17	62470916	62470944	(20786497)	+	G-rich	Low_complexity	1	31	(0)	1653057
15	40.2	0.0	0.0	chr17	62478685	62478768	(20778673)	+	(CCC)n	Simple_repeat	1	84	(0)	1653080
28	22.5	1.5	8.2	chr17	62627530	62627662	(20629779)	+	(CCCCCT)n	Simple_repeat	1	135	(0)	1653391
15	5.6	0.0	0.0	chr17	62628029	62628047	(20629394)	+	(GT)n	Simple_repeat	1	19	(0)	1653392
21	20.6	5.5	6.1	chr17	62819507	62819615	(20437826)	+	(TCTTC)n	Simple_repeat	1	115	(0)	1653746
1410	14.3	2.9	0.4	chr17	63434746	63434977	(19822464)	+	LTR25-int	LTR/ERV1	6650	6887	(301)	1654708
322	25.1	8.3	0.0	chr17	63476210	63476309	(19781132)	+	MIR3	SINE/MIR	81	185	(23)	1654784
33	0.0	0.0	2.8	chr17	63522999	63523034	(19734407)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1654861
23	28.3	3.8	1.8	chr17	63523162	63523267	(19734174)	+	GA-rich	Low_complexity	1	110	(0)	1654862
11	19.2	0.0	7.1	chr17	63699484	63699525	(19557916)	+	(CCACCC)n	Simple_repeat	1	42	(0)	1655190
17	30.7	0.0	1.6	chr17	65056597	65056658	(18200783)	+	(GCC)n	Simple_repeat	1	62	(0)	1657850
13	20.4	5.6	3.5	chr17	65056651	65056704	(18200737)	+	(CGG)n	Simple_repeat	1	57	(0)	1657851
21	11.9	12.5	0.0	chr17	65056717	65056809	(18200632)	+	(GCAGG)n	Simple_repeat	1	104	(0)	1657852
50	23.1	0.8	0.8	chr17	65100533	65100655	(18156786)	+	(TCC)n	Simple_repeat	1	124	(0)	1657971
30	16.4	0.0	3.1	chr17	65137148	65137212	(18120229)	+	(TCC)n	Simple_repeat	1	65	(0)	1658062
588	28.0	10.0	2.6	chr17	65294684	65294914	(17962527)	+	MIR	SINE/MIR	10	259	(3)	1658379
33	7.3	0.0	0.0	chr17	65554226	65554269	(17703172)	+	(TCC)n	Simple_repeat	1	44	(0)	1658884
15	16.9	0.0	0.0	chr17	65559093	65559125	(17698316)	+	(CCCTC)n	Simple_repeat	1	33	(0)	1658887
13	21.7	2.6	0.0	chr17	65560223	65560260	(17697181)	+	G-rich	Low_complexity	1	39	(0)	1658888
29	2.9	0.0	2.7	chr17	65561686	65561722	(17695719)	+	(CGCCC)n	Simple_repeat	1	37	(0)	1658891
13	18.9	2.8	0.0	chr17	65561838	65561873	(17695568)	+	(CTCCTGC)n	Simple_repeat	1	37	(0)	1658892
30	30.3	3.4	2.6	chr17	66302124	66302272	(16955169)	+	GA-rich	Low_complexity	1	154	(0)	1660070
271	34.2	12.2	2.9	chr17	66348568	66348841	(16908600)	C	Tigger19a	DNA/TcMar-Tigger	(16)	307	5	1660139
13	9.3	0.0	0.0	chr17	66374567	66374589	(16882852)	+	(AAGC)n	Simple_repeat	1	23	(0)	1660175
2136	14.2	0.0	1.6	chr17	66374717	66375032	(16882409)	C	AluSz6	SINE/Alu	(1)	311	1	1660176
188	40.0	0.9	0.0	chr17	66558698	66558812	(16698629)	C	L2c	LINE/L2	(639)	2780	2665	1660452
17	28.0	1.4	4.0	chr17	67377442	67377515	(15879926)	+	(GGC)n	Simple_repeat	1	75	(0)	1661911
78	25.4	2.6	5.0	chr17	68050123	68050136	(15207305)	+	(TTCC)n	Simple_repeat	1	13	(0)	1663407
27	2.7	0.0	6.8	chr17	68050137	68050180	(15207261)	+	(TCCCT)n	Simple_repeat	1	44	(0)	1663408
78	25.4	2.6	5.0	chr17	68050181	68050474	(15206967)	+	(TTCC)n	Simple_repeat	2	288	(0)	1663409
29	5.8	0.0	0.0	chr17	68205729	68205764	(15051677)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1663742
13	19.1	0.0	0.0	chr17	68292140	68292169	(14965272)	+	(GCA)n	Simple_repeat	1	30	(0)	1663905
924	18.3	6.2	9.9	chr17	68460119	68460241	(14797200)	C	MER33	DNA/hAT-Charlie	(189)	135	12	1664229
14	10.2	0.0	8.1	chr17	68460284	68460320	(14797121)	+	G-rich	Low_complexity	1	37	(0)	1664231
1128	19.3	10.9	7.3	chr17	69358708	69359088	(13898353)	+	MLT1A1	LTR/ERVL-MaLR	1	396	(12)	1665609
13	15.9	0.0	0.0	chr17	69415043	69415070	(13842371)	+	(TGCA)n	Simple_repeat	1	28	(0)	1665725
17	3.3	2.9	5.6	chr17	70171247	70171281	(13086160)	+	(TCCCCC)n	Simple_repeat	1	36	(0)	1666899
12	13.9	0.0	8.1	chr17	70171514	70171550	(13085891)	+	(ATTT)n	Simple_repeat	1	37	(0)	1666900
1168	30.4	7.5	1.0	chr17	70188338	70188836	(13068605)	+	LTR26	LTR/ERV1	70	603	(0)	1666922
4737	15.0	0.6	2.5	chr17	70188838	70189686	(13067755)	C	L1MA6	LINE/L1	(162)	6138	5306	1666923
14	18.9	2.8	0.0	chr17	72030586	72030621	(11226820)	+	G-rich	Low_complexity	1	37	(0)	1669700
19	33.0	0.0	2.3	chr17	72120832	72120866	(11136575)	+	(TCCCC)n	Simple_repeat	4	86	(0)	1669834
22	3.8	0.0	0.0	chr17	72125896	72125922	(11131519)	+	(TG)n	Simple_repeat	1	27	(0)	1669842
46	18.2	7.5	1.9	chr17	72150962	72151009	(11106432)	+	GA-rich	Low_complexity	1	152	(0)	1669883
33	21.6	1.1	3.2	chr17	72151010	72151102	(11106339)	+	G-rich	Low_complexity	1	94	(0)	1669884
34	11.1	4.1	2.6	chr17	72172093	72172166	(11085275)	+	(CCTCTCT)n	Simple_repeat	1	75	(0)	1669923
19	17.5	3.8	1.8	chr17	72336198	72336250	(10921191)	+	(GCCCT)n	Simple_repeat	1	55	(0)	1670207
13	7.6	7.1	0.0	chr17	72336632	72336659	(10920782)	+	(TTTCT)n	Simple_repeat	1	30	(0)	1670208
282	33.6	3.8	9.4	chr17	73007433	73007711	(10249730)	C	L2b	LINE/L2	(191)	3184	2926	1671425
480	24.3	5.6	1.9	chr17	73157357	73157511	(10099930)	+	MER5B	DNA/hAT-Charlie	1	161	(17)	1671758
1490	17.0	1.6	0.8	chr17	73223743	73223995	(10033446)	+	AluJr	SINE/Alu	44	298	(14)	1671886
36	30.0	1.4	3.5	chr17	73223996	73224138	(10033303)	+	G-rich	Low_complexity	1	145	(0)	1671887
1653	15.0	0.4	7.0	chr17	73224145	73224431	(10033010)	+	AluJb	SINE/Alu	2	269	(43)	1671888
32	2.9	0.0	0.0	chr17	73289716	73289750	(9967691)	+	(AGGAAGGG)n	Simple_repeat	1	35	(0)	1672004
54	21.9	4.2	4.0	chr17	73289752	73289941	(9967500)	+	GA-rich	Low_complexity	1	198	(0)	1672005
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
279	36.7	6.7	5.2	chr17	73341789	73342038	(9915403)	C	MIR	SINE/MIR	(1)	261	8	1672124
15	24.6	0.0	5.2	chr17	73342157	73342214	(9915227)	+	(CCCCT)n	Simple_repeat	1	58	(0)	1672125
659	26.5	7.3	6.0	chr17	73480837	73481206	(9776235)	+	LTR85c	LTR/Gypsy?	235	725	(98)	1672407
392	32.0	6.0	6.8	chr17	73613916	73614496	(9642945)	+	L2c	LINE/L2	2754	3329	(58)	1672655
240	20.8	0.0	0.0	chr17	73616980	73617027	(9640414)	+	L2a	LINE/L2	3378	3425	(1)	1672662
112	26.8	4.2	2.5	chr17	73757787	73758212	(9499229)	+	(CCTCT)n	Simple_repeat	1	444	(0)	1672898
14	10.7	3.1	3.0	chr17	73758547	73758578	(9498863)	+	G-rich	Low_complexity	1	33	(0)	1672900
1488	15.0	10.5	7.1	chr17	73758599	73758892	(9498549)	+	AluJr	SINE/Alu	1	305	(7)	1672901
18	14.9	0.0	7.7	chr17	74203455	74203506	(9053935)	+	GA-rich	Low_complexity	1	52	(0)	1673684
217	34.9	2.8	6.2	chr17	74272784	74273009	(8984432)	+	L2c	LINE/L2	2910	3127	(260)	1673821
792	10.8	0.0	0.0	chr17	74304183	74304284	(8953157)	C	AluSz6	SINE/Alu	(0)	312	211	1673898
11	21.2	2.5	2.4	chr17	74852554	74852593	(8404848)	+	(GCAGCT)n	Simple_repeat	1	41	(0)	1674876
12	8.1	3.6	3.5	chr17	74852615	74852642	(8404799)	+	G-rich	Low_complexity	1	29	(0)	1674877
628	25.4	1.8	0.0	chr17	74852824	74852992	(8404449)	+	MER5A	DNA/hAT-Charlie	18	189	(0)	1674878
14	18.0	0.0	7.8	chr17	74921269	74921319	(8336122)	+	G-rich	Low_complexity	1	51	(0)	1675002
261	32.0	11.0	0.0	chr17	74981871	74981967	(8275474)	+	L3b	LINE/CR1	4954	5062	(170)	1675116
1368	26.1	4.0	14.1	chr17	74985176	74985679	(8271762)	+	LTR16A	LTR/ERVL	1	451	(0)	1675125
365	20.8	1.3	0.0	chr17	75046405	75046481	(8210960)	+	L2a	LINE/L2	3347	3424	(2)	1675236
18	31.8	1.7	5.0	chr17	75047210	75047279	(8210162)	+	(CGG)n	Simple_repeat	1	116	(0)	1675237
13	14.3	2.3	6.7	chr17	75047280	75047323	(8210118)	+	(GGCGG)n	Simple_repeat	1	45	(0)	1675238
1932	10.0	0.7	0.4	chr17	75142278	75142557	(8114884)	+	AluSq	SINE/Alu	1	281	(32)	1675442
77	12.5	3.8	2.4	chr17	75142562	75142720	(8114721)	+	G-rich	Low_complexity	1	165	(0)	1675443
15	0.0	0.0	0.0	chr17	75142886	75142902	(8114539)	+	(AC)n	Simple_repeat	1	17	(0)	1675444
1525	14.5	10.8	8.7	chr17	75142909	75143277	(8114164)	+	MER21A	LTR/ERVL	25	402	(529)	1675445
592	24.5	7.0	2.9	chr17	75346863	75347010	(7910431)	+	LTR33	LTR/ERVL	57	215	(300)	1675911
3278	14.0	4.8	0.5	chr17	75347185	75347743	(7909698)	+	LTR27C	LTR/ERV1	1	584	(183)	1675913
15	24.3	3.8	0.0	chr17	75456678	75456730	(7800711)	+	GA-rich	Low_complexity	1	55	(0)	1676192
18	3.5	0.0	6.1	chr17	75517100	75517132	(7740309)	+	(CCTC)n	Simple_repeat	1	33	(0)	1676283
12	0.0	5.3	0.0	chr17	75721047	75721065	(7536376)	+	(GCA)n	Simple_repeat	1	20	(0)	1676646
13	21.7	0.0	2.6	chr17	75721317	75721355	(7536086)	+	(CGGCCC)n	Simple_repeat	1	39	(0)	1676647
13	12.7	0.0	0.0	chr17	75815035	75815060	(7442381)	+	(AGGGG)n	Simple_repeat	1	26	(0)	1676825
3573	12.0	8.0	3.5	chr17	75982046	75982451	(7274990)	+	MER39B	LTR/ERV1	203	653	(0)	1677154
14	8.4	0.0	3.7	chr17	76005848	76005874	(7251567)	+	(GGAG)n	Simple_repeat	1	27	(0)	1677216
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
13	7.2	6.5	3.0	chr17	76080453	76080483	(7176958)	+	GA-rich	Low_complexity	1	33	(0)	1677349
14	8.6	10.8	0.0	chr17	76080498	76080540	(7176901)	+	(GGTGCAG)n	Simple_repeat	1	47	(0)	1677350
124	0.0	0.8	1.7	chr17	76121216	76121333	(7136108)	+	(CA)n	Simple_repeat	1	119	(0)	1677425
20	3.7	0.0	0.0	chr17	76121563	76121598	(7135843)	+	(CCGGG)n	Simple_repeat	1	36	(0)	1677426
238	28.3	18.9	2.8	chr17	76125039	76125285	(7132156)	C	L2b	LINE/L2	(179)	3208	2913	1677432
1008	30.5	7.8	4.1	chr17	76126997	76127512	(7129929)	+	HAL1	LINE/L1	416	952	(1555)	1677436
637	15.9	0.8	2.3	chr17	76437719	76437847	(6819594)	+	L1MD3	LINE/L1	7839	7965	(30)	1678026
253	34.1	6.1	2.1	chr17	76484881	76484991	(6772450)	+	MIR	SINE/MIR	91	213	(55)	1678120
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
303	26.6	2.8	12.6	chr17	76667978	76668136	(6589305)	+	LTR16A	LTR/ERVL	3	145	(306)	1678516
461	28.0	3.6	2.6	chr17	76668129	76668319	(6589122)	+	LTR16A	LTR/ERVL	258	450	(1)	1678516
2113	11.5	3.3	0.3	chr17	76668369	76668663	(6588778)	+	AluSz	SINE/Alu	2	305	(7)	1678517
15	16.9	0.0	0.0	chr17	76669149	76669175	(6588266)	+	(TA)n	Simple_repeat	1	27	(0)	1678519
4031	15.2	3.7	8.6	chr17	76669176	76669621	(6587820)	C	L1MB8	LINE/L1	(10)	6168	5741	1678520
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
21	6.3	0.0	2.9	chr17	76726788	76726822	(6530619)	+	(CCGCC)n	Simple_repeat	1	35	(0)	1678615
14	10.4	3.0	2.9	chr17	76885535	76885567	(6371874)	+	(CCTGC)n	Simple_repeat	1	34	(0)	1678963
16	15.5	1.7	8.3	chr17	76925214	76925272	(6332169)	+	(CTGCC)n	Simple_repeat	1	60	(0)	1679042
195	33.3	2.0	5.0	chr17	77066685	77066785	(6190656)	+	MIRb	SINE/MIR	50	147	(121)	1679362
2480	4.7	4.8	0.0	chr17	77067017	77067356	(6190085)	+	MER4E1	LTR/ERV1	1	357	(424)	1679363
12	23.2	0.0	4.5	chr17	77140636	77140679	(6116762)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1679537
43	14.7	0.0	2.4	chr17	77383119	77383200	(5874241)	+	(CCTC)n	Simple_repeat	1	82	(0)	1679965
341	29.8	1.1	0.0	chr17	77383309	77383402	(5874039)	C	MIRb	SINE/MIR	(13)	255	161	1679966
268	29.0	1.7	20.7	chr17	77441446	77441667	(5815774)	C	MIRc	SINE/MIR	(29)	239	61	1680049
740	8.2	0.0	0.0	chr17	77476920	77477017	(5780424)	C	L1PA8	LINE/L1	(3)	6169	6072	1680101
28	26.5	3.1	2.0	chr17	77477060	77477157	(5780284)	+	(TCCC)n	Simple_repeat	1	101	(0)	1680102
1235	27.6	8.1	0.0	chr17	77477160	77477558	(5779883)	C	L1MB5	LINE/L1	(8)	6166	5733	1680103
14	18.9	2.8	0.0	chr17	77528733	77528768	(5728673)	+	G-rich	Low_complexity	1	37	(0)	1680186
17	10.8	0.0	0.0	chr17	77529116	77529145	(5728296)	+	(GCTGG)n	Simple_repeat	1	30	(0)	1680187
59	20.2	3.5	5.2	chr17	77735900	77736102	(5521339)	+	G-rich	Low_complexity	1	210	(0)	1680552
346	29.4	7.7	8.6	chr17	77736121	77736317	(5521124)	+	MIR3	SINE/MIR	8	202	(6)	1680553
8832	2.1	0.0	31.8	chr17	77775636	77777660	(5479781)	+	SVA_E	Retroposon/SVA	1	1382	(0)	1680627
257	27.3	7.6	3.5	chr17	77887315	77887428	(5370013)	C	MLT1I	LTR/ERVL-MaLR	(17)	394	276	1680821
273	33.3	3.7	8.4	chr17	78001437	78001662	(5255779)	+	L1ME3G	LINE/L1	453	667	(257)	1681034
207	35.4	1.2	0.0	chr17	78128964	78129045	(5128396)	+	MIRc	SINE/MIR	101	183	(85)	1681243
19	20.8	1.5	5.8	chr17	78168588	78168655	(5088786)	+	(GCG)n	Simple_repeat	1	69	(0)	1681320
511	22.0	8.9	10.4	chr17	78176755	78176947	(5080494)	C	MER20	DNA/hAT-Charlie	(25)	194	5	1681327
268	35.0	9.1	5.1	chr17	78335225	78335524	(4921917)	C	L3	LINE/CR1	(1686)	2413	2101	1681675
2378	10.1	0.0	0.3	chr17	78335525	78335832	(4921609)	C	AluSp	SINE/Alu	(6)	307	1	1681676
14	26.5	0.0	3.8	chr17	78360287	78360339	(4897102)	+	(GCG)n	Simple_repeat	1	53	(0)	1681727
12	15.3	3.5	0.0	chr17	78361236	78361264	(4896177)	+	GA-rich	Low_complexity	1	30	(0)	1681728
14	17.4	3.4	6.6	chr17	78924582	78924640	(4332801)	+	(GTCCCCA)n	Simple_repeat	1	61	(0)	1682694
17	19.2	3.4	4.9	chr17	78925303	78925363	(4332078)	+	(GGC)n	Simple_repeat	1	60	(0)	1682695
12	24.5	2.6	7.5	chr17	78925564	78925641	(4331800)	+	(CCCGGAC)n	Simple_repeat	1	80	(0)	1682696
15	24.3	0.0	3.9	chr17	78936280	78936331	(4321110)	+	G-rich	Low_complexity	1	52	(0)	1682714
18	4.7	0.0	0.0	chr17	78936421	78936442	(4320999)	+	(A)n	Simple_repeat	1	22	(0)	1682715
2271	11.0	0.0	0.3	chr17	78936450	78936750	(4320691)	+	AluSx1	SINE/Alu	1	300	(12)	1682716
15	12.0	5.3	2.5	chr17	79183459	79183496	(4073945)	+	(CTC)n	Simple_repeat	1	40	(0)	1683097
189	31.0	4.1	0.0	chr17	79242492	79242562	(4014879)	+	L3	LINE/CR1	861	934	(3165)	1683174
15	22.2	2.0	2.0	chr17	79242563	79242611	(4014830)	+	GA-rich	Low_complexity	1	50	(0)	1683175
14	13.6	0.0	5.6	chr17	79707220	79707255	(3550186)	+	(CCCCT)n	Simple_repeat	1	36	(0)	1683787
12	22.0	4.8	0.0	chr17	79720991	79721032	(3536409)	+	G-rich	Low_complexity	1	44	(0)	1683810
21	6.3	2.9	0.0	chr17	79742009	79742042	(3515399)	+	(CCCCTG)n	Simple_repeat	1	35	(0)	1683854
23	8.0	2.4	0.0	chr17	79746227	79746264	(3511177)	+	(AGAAA)n	Simple_repeat	3	41	(0)	1683864
22	21.5	0.0	0.0	chr17	79746414	79746462	(3510979)	+	(CCT)n	Simple_repeat	1	49	(0)	1683865
18	18.8	2.0	2.0	chr17	79810553	79810602	(3446839)	+	(CCGCTC)n	Simple_repeat	1	51	(0)	1683966
44	7.6	0.0	0.0	chr17	79810659	79810714	(3446727)	+	(TG)n	Simple_repeat	1	56	(0)	1683967
19	12.1	3.2	7.7	chr17	79838874	79838936	(3418505)	+	(CCCCACC)n	Simple_repeat	1	65	(0)	1684010
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
12	28.7	0.0	2.1	chr17	79845067	79845114	(3412327)	+	(CCCCGCC)n	Simple_repeat	1	48	(0)	1684019
91	9.7	0.0	1.4	chr17	79929941	79930079	(3327362)	+	(CCCCT)n	Simple_repeat	1	139	(0)	1684192
80	17.4	1.2	2.3	chr17	79930080	79930105	(3327336)	+	(TCTCC)n	Simple_repeat	32	174	(0)	1684191
17	24.3	5.3	2.5	chr17	79991621	79991696	(3265745)	+	(GGCA)n	Simple_repeat	1	80	(0)	1684258
24	16.6	0.0	0.0	chr17	79991691	79991738	(3265703)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1684259
2815	15.7	7.6	3.6	chr17	80128973	80129613	(3127828)	C	L1MB7	LINE/L1	(21)	6336	5668	1684496
39	20.0	1.2	0.0	chr17	80205225	80205307	(3052134)	+	(TCCC)n	Simple_repeat	1	84	(0)	1684661
29	19.7	5.1	2.9	chr17	80476464	80476561	(2780880)	+	(GCTCCG)n	Simple_repeat	1	103	(0)	1685066
14	13.3	7.0	2.2	chr17	80493234	80493276	(2764165)	+	GA-rich	Low_complexity	1	46	(0)	1685092
488	24.2	12.1	5.0	chr17	80590684	80591087	(2666354)	C	L1ME3B	LINE/L1	(2359)	3787	3338	1685268
122	3.1	0.8	0.8	chr17	80591149	80591281	(2666160)	+	(CCCCTCTCCT)n	Simple_repeat	1	134	(0)	1685271
12	18.1	3.1	0.0	chr17	80591282	80591313	(2666128)	+	(TTCCC)n	Simple_repeat	1	33	(0)	1685272
19	25.3	2.5	3.7	chr17	80591305	80591310	(2666131)	+	(CTTT)n	Simple_repeat	1	10	(59)	1685273
13	7.6	3.1	6.1	chr17	80591311	80591342	(2666099)	+	(TTCTT)n	Simple_repeat	1	33	(0)	1685274
39	12.8	1.4	1.4	chr17	81096926	81096996	(2160445)	+	GA-rich	Low_complexity	1	72	(0)	1685859
13	10.7	6.7	0.0	chr17	81239695	81239724	(2017717)	+	(CCCTT)n	Simple_repeat	1	32	(0)	1686024
117	14.2	2.4	0.0	chr17	81307363	81307570	(1949871)	+	(CCCTTC)n	Simple_repeat	1	213	(0)	1686096
244	26.9	4.4	4.4	chr17	81329921	81330033	(1927408)	+	MIR3	SINE/MIR	29	141	(127)	1686131
15	16.0	2.9	0.0	chr17	81340058	81340093	(1917348)	+	(CCCCTC)n	Simple_repeat	1	37	(0)	1686140
16	10.2	0.0	7.9	chr17	81392293	81392330	(1865111)	+	GA-rich	Low_complexity	1	38	(0)	1686224
12	22.6	4.2	2.0	chr17	81393862	81393909	(1863532)	+	(GGCC)n	Simple_repeat	1	50	(0)	1686225
20	7.9	0.0	0.0	chr17	81395099	81395125	(1862316)	+	(TG)n	Simple_repeat	1	27	(0)	1686226
33	5.6	0.0	0.0	chr17	81399117	81399153	(1858288)	+	(GT)n	Simple_repeat	1	37	(0)	1686230
2021	22.0	7.5	5.7	chr17	81486053	81486723	(1770718)	C	L1MB4	LINE/L1	(28)	6152	5469	1686294
47	24.9	8.9	1.9	chr17	81504532	81504621	(1752820)	+	GA-rich	Low_complexity	164	263	(0)	1686336
870	27.4	7.5	6.8	chr17	81504627	81505045	(1752396)	+	L1MC5	LINE/L1	8529	8943	(361)	1686337
13	18.7	5.8	3.6	chr17	81515123	81515174	(1742267)	+	(GCGG)n	Simple_repeat	1	55	(0)	1686355
318	31.8	16.4	1.1	chr17	81665674	81665854	(1591587)	+	MIRb	SINE/MIR	45	258	(10)	1686612
235	25.3	14.6	0.0	chr17	81665925	81666070	(1591371)	+	L2	LINE/L2	113	283	(3136)	1686613
231	20.4	1.8	0.0	chr17	81711071	81711124	(1546317)	C	MER47C	DNA/TcMar-Tigger	(14)	83	29	1686673
231	29.7	6.7	3.5	chr17	81817780	81817894	(1439547)	+	L2	LINE/L2	2309	2427	(992)	1686767
14	0.0	13.8	0.0	chr17	82103824	82103852	(1153589)	+	(GGGGCA)n	Simple_repeat	1	33	(0)	1687141
152	20.1	1.9	3.6	chr17	82293107	82293531	(963910)	+	G-rich	Low_complexity	1	417	(0)	1687437
25	10.3	4.0	7.8	chr17	82296908	82296981	(960460)	+	(CCCT)n	Simple_repeat	1	77	(0)	1687446
584	24.3	4.1	10.3	chr17	82296999	82297338	(960103)	+	Looper	DNA/PiggyBac	38	355	(1202)	1687447
3085	19.8	5.7	1.4	chr17	82358326	82358796	(898645)	+	L1MC1	LINE/L1	5823	6333	(0)	1687523
14	15.8	0.0	5.1	chr17	82441091	82441129	(816312)	+	(CCCTCC)n	Simple_repeat	1	39	(0)	1687648
156	18.1	1.6	0.6	chr17	82648573	82648887	(608554)	+	G-rich	Low_complexity	1	320	(0)	1688031
3098	16.5	9.0	9.5	chr17	82754157	82754750	(502691)	C	LTR8A	LTR/ERV1	(111)	616	3	1688196
26	13.8	5.3	0.0	chr17	82881885	82881945	(375496)	+	(CTCC)n	Simple_repeat	1	64	(0)	1688365
849	27.0	13.5	2.0	chr17	82900148	82900642	(356799)	C	L1ME1	LINE/L1	(134)	6045	5485	1688381
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
1010	28.6	16.0	3.7	chr18	304105	304559	(80068726)	C	MamGypLTR2c	LTR/Gypsy	(95)	973	431	1689575
21	11.7	0.0	2.6	chr18	812001	812039	(79561246)	+	(GCG)n	Simple_repeat	1	39	(0)	1690507
15	19.5	6.5	3.0	chr18	812040	812055	(79561230)	+	G-rich	Low_complexity	18	66	(0)	1690508
412	32.4	1.7	6.0	chr18	841359	841440	(79531845)	+	L2b	LINE/L2	2903	2983	(404)	1690576
3506	6.5	4.6	10.0	chr18	841441	841608	(79531677)	+	LTR2C	LTR/ERV1	4	194	(307)	1690577
31	0.0	0.0	0.0	chr18	841609	841637	(79531648)	+	(AAT)n	Simple_repeat	1	29	(0)	1690578
2189	8.5	1.0	2.5	chr18	2525035	2525348	(77847937)	+	L1PA10	LINE/L1	5857	6165	(3)	1692813
23	18.1	2.0	0.0	chr18	3281855	3281905	(77091380)	+	(CCCTTC)n	Simple_repeat	1	52	(0)	1694090
56	0.0	1.9	0.0	chr18	3281911	3281964	(77091321)	+	(TTCC)n	Simple_repeat	1	55	(0)	1694091
14	12.6	0.0	7.5	chr18	3448257	3448296	(76924989)	+	(CCTCCTC)n	Simple_repeat	1	40	(0)	1694436
14	18.7	5.0	4.8	chr18	3450196	3450255	(76923030)	+	GA-rich	Low_complexity	1	63	(0)	1694439
13	28.8	0.0	2.1	chr18	3452651	3452698	(76920587)	+	(TCC)n	Simple_repeat	1	48	(0)	1694441
266	26.3	7.7	2.2	chr18	3867217	3867356	(76505929)	+	MIR3	SINE/MIR	38	180	(28)	1695185
504	29.7	4.7	0.6	chr18	5073054	5073236	(75300049)	C	MIR	SINE/MIR	(65)	197	7	1696765
240	38.3	2.3	0.8	chr18	5073234	5073362	(75299923)	+	MIR3	SINE/MIR	68	198	(10)	1696766
25	22.4	7.0	2.5	chr18	5543320	5543433	(74829852)	+	(GCGCCGC)n	Simple_repeat	1	122	(0)	1697365
38	2.8	0.0	0.0	chr18	5630861	5630897	(74742388)	+	(AC)n	Simple_repeat	1	37	(0)	1697497
308	21.7	7.8	0.0	chr18	7946796	7946878	(72426407)	+	LTR79	LTR/ERVL	10	99	(428)	1700791
849	23.1	9.1	1.6	chr18	7946897	7947212	(72426073)	+	LTR79	LTR/ERVL	145	486	(41)	1700791
3403	15.6	0.6	0.6	chr18	8177580	8178115	(72195170)	C	MER50	LTR/ERV1	(24)	710	175	1701039
28	18.2	6.6	0.0	chr18	9104657	9104732	(71268553)	+	(TCCC)n	Simple_repeat	1	81	(0)	1702466
316	23.1	6.9	6.2	chr18	9104802	9104930	(71268355)	C	L1ME4a	LINE/L1	(7)	6117	5988	1702467
21	7.5	0.0	0.0	chr18	9609045	9609072	(70764213)	+	(TC)n	Simple_repeat	1	28	(0)	1703327
22	24.5	4.8	1.1	chr18	9614634	9614777	(70758508)	+	(GCCCC)n	Simple_repeat	1	149	(0)	1703335
385	32.6	15.1	4.4	chr18	9920736	9921146	(70452139)	+	L2c	LINE/L2	2923	3385	(2)	1703867
14	20.7	1.6	8.1	chr18	10444443	10444503	(69928782)	+	G-rich	Low_complexity	1	62	(0)	1704569
214	27.0	1.6	3.1	chr18	10836450	10836514	(69536771)	C	MIR3	SINE/MIR	(104)	104	41	1705027
185	31.0	18.8	3.8	chr18	11849829	11850120	(68523165)	C	L2c	LINE/L2	(8)	3379	3034	1706451
300	30.9	13.2	2.1	chr18	11955531	11955765	(68417520)	C	L3	LINE/CR1	(696)	3403	3139	1706658
379	21.1	3.1	0.0	chr18	11955829	11955923	(68417362)	C	MER76	LTR/ERVL	(279)	412	315	1706663
704	12.6	2.6	0.0	chr18	11955931	11956041	(68417244)	+	AluSx3	SINE/Alu	5	118	(193)	1706664
37	23.7	1.1	8.9	chr18	11981285	11981472	(68391813)	+	G-rich	Low_complexity	1	190	(0)	1706731
13	28.8	0.0	4.7	chr18	12377343	12377406	(67995879)	+	G-rich	Low_complexity	1	64	(0)	1707303
2315	11.0	1.3	0.7	chr18	12539647	12539956	(67833329)	+	AluSx1	SINE/Alu	1	312	(0)	1707632
322	30.8	13.6	5.1	chr18	12539957	12540118	(67833167)	C	L2a	LINE/L2	(194)	3232	3059	1707629
280	30.1	11.2	3.3	chr18	12679048	12679228	(67694057)	C	L2c	LINE/L2	(1128)	2291	2094	1707906
2121	11.5	0.9	10.6	chr18	12679229	12679606	(67693679)	+	MER61A	LTR/ERV1	1	341	(0)	1707916
337	23.6	2.7	11.2	chr18	13443471	13443675	(66929610)	C	L1MC5	LINE/L1	(281)	9023	8837	1709099
14	0.0	0.0	0.0	chr18	13443693	13443710	(66929575)	+	(GTC)n	Simple_repeat	1	18	(0)	1709100
972	28.1	15.1	0.8	chr18	13443717	13444219	(66929066)	C	L1MC5	LINE/L1	(447)	8857	8270	1709099
1829	13.4	1.7	2.1	chr18	21599062	21599351	(58773934)	+	AluJb	SINE/Alu	3	291	(21)	1712887
35	14.1	3.6	3.5	chr18	21764222	21764305	(58608980)	+	(TTCC)n	Simple_repeat	1	87	(0)	1713269
471	27.4	6.0	6.5	chr18	21936207	21936549	(58436736)	+	L2a	LINE/L2	3056	3426	(0)	1713565
22	18.8	5.1	3.7	chr18	22169335	22169412	(58203873)	+	(CTCCC)n	Simple_repeat	1	82	(0)	1714086
12	27.6	4.0	3.9	chr18	22170171	22170245	(58203040)	+	(CTCCG)n	Simple_repeat	1	78	(0)	1714087
43	20.3	1.0	1.0	chr18	22271170	22271265	(58102020)	+	GA-rich	Low_complexity	1	97	(0)	1714266
11	16.8	5.8	5.5	chr18	22271346	22271397	(58101888)	+	(AGATTTG)n	Simple_repeat	1	55	(0)	1714267
18	7.6	0.0	0.0	chr18	22324252	22324279	(58049006)	+	(GGGCT)n	Simple_repeat	1	28	(0)	1714379
13	18.6	0.0	8.0	chr18	22348614	22348663	(58024622)	+	(CCGGCC)n	Simple_repeat	1	50	(0)	1714416
33	0.0	0.0	0.0	chr18	22470312	22470339	(57902946)	+	(CA)n	Simple_repeat	1	28	(0)	1714607
49	4.1	0.0	0.0	chr18	22493298	22493348	(57879937)	+	(AC)n	Simple_repeat	1	51	(0)	1714640
218	26.2	2.3	14.3	chr18	23142622	23142719	(57230566)	C	L2c	LINE/L2	(0)	3387	3302	1715696
414	24.1	15.4	0.0	chr18	23142878	23143014	(57230271)	C	MIR	SINE/MIR	(14)	248	87	1715697
227	16.7	0.0	0.0	chr18	23240991	23241026	(57132259)	C	MER3	DNA/hAT-Charlie	(159)	50	15	1715851
1278	25.0	8.4	0.5	chr18	23241030	23241238	(57132047)	C	L1ME2z	LINE/L1	(424)	6020	5803	1715852
120	24.3	2.4	5.3	chr18	23411129	23411554	(56961731)	+	GA-rich	Low_complexity	1	436	(0)	1716141
245	25.7	6.6	6.6	chr18	23635679	23635799	(56737486)	C	MER5A	DNA/hAT-Charlie	(68)	121	1	1716574
26	0.0	0.0	0.0	chr18	24014742	24014766	(56358519)	+	(CTCCC)n	Simple_repeat	1	25	(0)	1717218
13	8.1	0.0	6.7	chr18	24818631	24818660	(55554625)	+	(TCCC)n	Simple_repeat	1	30	(0)	1718513
18	13.4	0.0	0.0	chr18	25350021	25350053	(55023232)	+	(AGG)n	Simple_repeat	1	33	(0)	1719206
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
790	10.4	0.0	1.9	chr18	26228656	26228761	(54144524)	+	AluSz6	SINE/Alu	176	279	(33)	1720580
11	21.1	2.5	2.4	chr18	26656450	26656489	(53716796)	+	G-rich	Low_complexity	1	41	(0)	1721302
12	30.1	0.0	3.5	chr18	28177146	28177202	(52196083)	+	(CCCCGCT)n	Simple_repeat	1	57	(0)	1723420
13	14.2	3.2	0.0	chr18	28180792	28180822	(52192463)	+	(CCTCC)n	Simple_repeat	1	32	(0)	1723422
349	40.2	5.3	2.1	chr18	28195147	28195474	(52177811)	+	L2b	LINE/L2	3029	3417	(9)	1723444
2091	22.9	5.8	1.0	chr18	31049306	31049809	(49323476)	C	MLT1F2	LTR/ERVL-MaLR	(29)	531	2	1727138
16	25.7	1.8	1.7	chr18	31102451	31102507	(49270778)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	1727208
16	28.8	2.5	2.5	chr18	31684626	31684704	(48688581)	+	G-rich	Low_complexity	1	81	(0)	1728040
31	15.7	1.1	6.7	chr18	32770644	32770732	(47602553)	+	G-rich	Low_complexity	1	90	(0)	1729865
1679	17.9	0.0	5.3	chr18	33375791	33376109	(46997176)	C	MER50	LTR/ERV1	(0)	734	433	1730644
1139	13.1	3.5	11.6	chr18	33376104	33376353	(46996932)	C	MER50	LTR/ERV1	(505)	229	1	1730644
12	20.5	2.9	0.0	chr18	34159896	34159929	(46213356)	+	G-rich	Low_complexity	1	35	(0)	1731584
14	11.1	0.0	6.1	chr18	34222908	34222940	(46150345)	+	(CCCT)n	Simple_repeat	1	33	(0)	1731665
23	15.2	3.1	4.5	chr18	34224917	34224929	(46148356)	+	(CCCCT)n	Simple_repeat	1	29	(40)	1731667
13	21.5	4.7	0.0	chr18	34224930	34224972	(46148313)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	1731668
23	15.2	3.1	4.5	chr18	34224973	34224987	(46148298)	+	(CCCCT)n	Simple_repeat	30	69	(0)	1731667
13	17.6	2.5	2.4	chr18	34225082	34225121	(46148164)	+	(GCAGGCT)n	Simple_repeat	1	41	(0)	1731669
215	26.3	2.6	2.6	chr18	35344651	35344728	(45028557)	C	MIRc	SINE/MIR	(18)	250	173	1733186
474	26.8	7.4	2.3	chr18	35344751	35344964	(45028321)	C	MIR	SINE/MIR	(21)	247	20	1733187
15	4.2	4.0	0.0	chr18	35376959	35376983	(44996302)	+	(CCGCG)n	Simple_repeat	1	26	(0)	1733224
868	23.8	8.2	5.0	chr18	35386658	35386988	(44986297)	+	LTR41	LTR/ERVL	88	515	(253)	1733240
268	18.6	10.7	0.2	chr18	35616847	35616926	(44756359)	+	MIR	SINE/MIR	107	199	(69)	1733591
277	26.9	2.1	12.3	chr18	35617200	35617305	(44755980)	+	L2c	LINE/L2	3293	3387	(0)	1733592
1892	10.3	8.0	2.2	chr18	36067891	36068207	(44305078)	+	L1MA2	LINE/L1	5968	6304	(0)	1734239
15	9.5	8.8	0.0	chr18	36297473	36297506	(44075779)	+	(GCC)n	Simple_repeat	1	37	(0)	1734614
437	35.7	4.8	1.0	chr18	36449041	36449241	(43924044)	C	MamTip2	DNA/hAT-Tip100	(96)	209	1	1734802
12	28.7	0.0	0.0	chr18	36464652	36464693	(43908592)	+	GA-rich	Low_complexity	1	42	(0)	1734824
17	23.6	3.2	3.1	chr18	36464709	36464771	(43908514)	+	GA-rich	Low_complexity	1	65	(0)	1734824
29	0.0	0.0	0.0	chr18	44839407	44839433	(35533852)	+	(TGC)n	Simple_repeat	1	27	(0)	1746031
42	0.0	0.0	0.0	chr18	45016732	45016767	(35356518)	+	(CA)n	Simple_repeat	1	36	(0)	1746280
12	13.9	0.0	8.1	chr18	45016777	45016813	(35356472)	+	(CACCC)n	Simple_repeat	1	37	(0)	1746281
13	16.0	2.7	2.7	chr18	46153252	46153294	(34219991)	+	G-rich	Low_complexity	1	43	(0)	1748131
410	25.9	5.4	4.8	chr18	46281756	46281901	(34091384)	+	MIR	SINE/MIR	99	245	(17)	1748372
209	25.4	5.3	0.0	chr18	46466339	46466409	(33906876)	+	L3	LINE/CR1	3889	3963	(136)	1748707
638	25.0	8.6	2.6	chr18	46485782	46486093	(33887192)	+	L2a	LINE/L2	2876	3193	(233)	1748744
193	32.0	10.2	8.0	chr18	46793662	46793899	(33579386)	C	L2c	LINE/L2	(4)	3383	3140	1749265
381	27.6	0.0	1.0	chr18	46793902	46794000	(33579285)	+	MER5B	DNA/hAT-Charlie	3	100	(78)	1749266
193	32.8	1.6	0.0	chr18	47166672	47166732	(33206553)	C	L2	LINE/L2	(648)	2771	2710	1749786
221	31.4	9.7	1.6	chr18	47174686	47174808	(33198477)	+	L2c	LINE/L2	2739	2872	(547)	1749794
371	30.9	13.9	3.0	chr18	47174797	47175132	(33198153)	+	L2c	LINE/L2	3012	3386	(1)	1749794
11	21.6	0.0	4.9	chr18	47251755	47251795	(33121490)	+	(GAGCGA)n	Simple_repeat	1	41	(0)	1749908
16	14.4	2.5	2.4	chr18	47930512	47930556	(32442729)	+	G-rich	Low_complexity	1	45	(0)	1751013
37	9.5	0.0	0.0	chr18	47930558	47930614	(32442671)	+	(GGGAG)n	Simple_repeat	1	57	(0)	1751014
1065	13.2	7.0	1.1	chr18	47982855	47983030	(32390255)	C	THE1D	LTR/ERVL-MaLR	(188)	187	1	1751108
17	25.6	0.0	3.4	chr18	48008319	48008377	(32364908)	+	G-rich	Low_complexity	1	59	(0)	1751162
13	27.6	4.1	2.6	chr18	48008366	48008375	(32364910)	+	(CGGCCC)n	Simple_repeat	1	22	(54)	1751163
13	17.6	2.4	4.7	chr18	48008376	48008417	(32364868)	+	(CCT)n	Simple_repeat	1	43	(0)	1751164
13	27.6	4.1	2.6	chr18	48008418	48008438	(32364847)	+	(CGGCCC)n	Simple_repeat	23	76	(0)	1751163
764	25.4	10.0	0.7	chr18	48199245	48199608	(32173677)	C	HAL1	LINE/L1	(1109)	1356	946	1751501
36	15.2	1.5	0.0	chr18	48199623	48199689	(32173596)	+	(TCC)n	Simple_repeat	1	68	(0)	1751504
262	28.2	1.2	4.5	chr18	48199694	48199782	(32173503)	C	HAL1	LINE/L1	(1616)	891	806	1751501
16	11.1	0.0	0.0	chr18	48410449	48410477	(31962808)	+	(CCCCG)n	Simple_repeat	1	29	(0)	1751864
13	17.0	6.0	3.8	chr18	48423244	48423293	(31949992)	+	(CCTCC)n	Simple_repeat	1	53	(0)	1751887
28	11.3	1.5	6.1	chr18	48539080	48539144	(31834141)	+	(CCTC)n	Simple_repeat	1	66	(0)	1752077
15	17.1	0.0	0.0	chr18	48539242	48539274	(31834011)	+	(CCCTTC)n	Simple_repeat	1	33	(0)	1752078
352	33.2	5.6	2.1	chr18	48776857	48777028	(31596257)	+	MIR3	SINE/MIR	21	194	(14)	1752429
533	30.6	9.7	2.5	chr18	48781738	48781975	(31591310)	+	MIRc	SINE/MIR	12	268	(0)	1752434
14	12.3	5.4	2.6	chr18	48828892	48828928	(31544357)	+	(CCT)n	Simple_repeat	1	39	(0)	1752501
233	32.5	1.1	1.1	chr18	48833809	48833895	(31539390)	C	MamTip2	DNA/hAT-Tip100	(170)	135	49	1752506
28	19.3	0.0	3.0	chr18	48834009	48834074	(31539211)	+	(CCCTT)n	Simple_repeat	1	66	(0)	1752507
1371	20.4	2.7	15.6	chr18	48834085	48834474	(31538811)	C	MER58B	DNA/hAT-Charlie	(3)	338	1	1752508
797	29.1	3.9	4.3	chr18	48839441	48839704	(31533581)	C	MIR	SINE/MIR	(2)	260	3	1752518
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
20	14.0	0.0	2.4	chr18	48950321	48950361	(31422924)	+	(CCT)n	Simple_repeat	1	41	(0)	1752709
240	33.7	5.5	1.1	chr18	48997421	48997507	(31375778)	+	MIR3	SINE/MIR	94	184	(24)	1752802
974	16.8	7.4	4.6	chr18	49459831	49460067	(30913218)	+	L1MB7	LINE/L1	5941	6184	(0)	1753565
414	30.6	8.9	9.9	chr18	49613810	49614410	(30758875)	C	L2b	LINE/L2	(2)	3385	2795	1753903
1621	19.6	10.0	8.4	chr18	49679038	49679086	(30694199)	C	MLT2B1	LTR/ERVL	(0)	520	478	1754029
585	18.9	0.0	0.0	chr18	49679087	49679181	(30694104)	+	MER47C	DNA/TcMar-Tigger	1	95	(2)	1754030
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
253	29.6	3.0	0.0	chr18	50748446	50748543	(29624742)	C	LTR88b	LTR/Gypsy?	(733)	104	4	1755676
183	34.9	13.7	1.6	chr18	50751848	50751975	(29621310)	+	MamTip2	DNA/hAT-Tip100	5	150	(155)	1755678
12	28.9	0.0	0.0	chr18	50752079	50752120	(29621165)	+	G-rich	Low_complexity	1	42	(0)	1755679
987	15.4	5.6	17.1	chr18	50855083	50855224	(29518061)	+	AluSz6	SINE/Alu	2	132	(180)	1755872
35	27.0	0.9	0.9	chr18	51196911	51197018	(29176267)	+	(TCCTCC)n	Simple_repeat	1	109	(0)	1756516
23	3.7	0.0	0.0	chr18	55322423	55322450	(25050835)	+	(A)n	Simple_repeat	1	28	(0)	1762525
30	5.3	0.0	0.0	chr18	55586114	55586153	(24787132)	+	(GAG)n	Simple_repeat	1	40	(0)	1762864
87	0.0	0.0	0.0	chr18	55586154	55586229	(24787056)	+	(AGC)n	Simple_repeat	1	76	(0)	1762865
17	8.7	8.1	0.0	chr18	55588240	55588276	(24785009)	+	G-rich	Low_complexity	1	40	(0)	1762869
20	21.3	1.6	3.1	chr18	56638607	56638669	(23734616)	+	G-rich	Low_complexity	1	64	(0)	1764412
69	19.1	3.4	3.8	chr18	57150612	57150815	(23222470)	+	(AGAGAC)n	Simple_repeat	1	211	(0)	1765128
17	26.8	1.4	4.1	chr18	57435084	57435155	(22938130)	+	(CTCC)n	Simple_repeat	1	73	(0)	1765551
31	0.0	8.1	0.0	chr18	57470769	57470805	(22902480)	+	(CA)n	Simple_repeat	1	40	(0)	1765596
1795	11.5	0.4	5.8	chr18	57630669	57630963	(22742322)	+	AluJb	SINE/Alu	4	282	(30)	1765873
518	26.7	9.6	8.7	chr18	57793183	57793836	(22579449)	+	L2a	LINE/L2	2561	3203	(223)	1766191
13	17.2	4.9	2.3	chr18	58044093	58044133	(22329152)	+	(CCGC)n	Simple_repeat	1	43	(0)	1766702
14	12.0	0.0	3.5	chr18	58044202	58044230	(22329055)	+	GA-rich	Low_complexity	1	29	(0)	1766703
12	9.7	5.4	5.1	chr18	58186223	58186259	(22187026)	+	(TCCCTC)n	Simple_repeat	1	39	(0)	1766940
432	32.8	1.8	3.7	chr18	58215879	58216132	(22157153)	C	L1ME4c	LINE/L1	(335)	495	283	1766984
359	27.8	20.0	2.7	chr18	58216189	58216847	(22156438)	C	L2	LINE/L2	(337)	3082	2282	1766985
2650	16.5	3.9	1.5	chr18	58496714	58497242	(21876043)	+	MER74A	LTR/ERVL	17	558	(0)	1767341
11	13.2	5.7	2.7	chr18	58603526	58603560	(21769725)	+	(CTTCCC)n	Simple_repeat	1	37	(0)	1767515
15	27.2	0.0	6.7	chr18	58671348	58671422	(21701863)	+	(GCCCC)n	Simple_repeat	1	75	(0)	1767638
13	20.4	2.4	2.4	chr18	59359415	59359455	(21013830)	+	G-rich	Low_complexity	1	42	(0)	1768822
67	23.0	2.0	0.0	chr18	59547027	59547177	(20826108)	+	GA-rich	Low_complexity	1	154	(0)	1769112
552	8.6	0.0	0.0	chr18	59547178	59547247	(20826038)	+	AluSx	SINE/Alu	6	75	(237)	1769113
276	25.2	9.1	2.2	chr18	59783504	59783713	(20589572)	C	L2a	LINE/L2	(306)	3120	2840	1769483
11	15.8	6.5	4.1	chr18	59899637	59899682	(20473603)	+	(CCACTC)n	Simple_repeat	1	49	(0)	1769752
26	13.3	0.0	3.7	chr18	62328190	62328243	(18045042)	+	GA-rich	Low_complexity	1	54	(0)	1773281
40	38.6	4.8	2.2	chr18	62384224	62384230	(17989055)	+	(TTC)n	Simple_repeat	1	44	(325)	1773370
126	14.8	7.3	0.9	chr18	62384231	62384532	(17988753)	+	(CTC)n	Simple_repeat	1	324	(0)	1773371
373	16.9	6.7	2.4	chr18	62710541	62710625	(17662660)	C	MER135	DNA	(64)	164	76	1773926
66	18.6	5.3	0.0	chr18	63055253	63055404	(17317881)	+	(CT)n	Simple_repeat	1	160	(0)	1774480
24	25.8	2.4	2.4	chr18	63197631	63197712	(17175573)	+	G-rich	Low_complexity	1	84	(0)	1774697
3182	7.9	0.7	4.2	chr18	63452219	63452611	(16920674)	C	LTR71B	LTR/ERV1	(175)	435	58	1775108
4486	8.5	7.2	0.2	chr18	63452612	63453238	(16920047)	+	LTR76	LTR/ERV1	1	675	(0)	1775109
13	21.3	0.0	0.0	chr18	65750567	65750599	(14622686)	+	(GCGT)n	Simple_repeat	1	33	(0)	1778211
15	14.4	7.5	2.3	chr18	65750774	65750813	(14622472)	+	(CT)n	Simple_repeat	1	43	(0)	1778212
532	31.1	6.4	0.5	chr18	68691612	68691820	(11681465)	+	MIRc	SINE/MIR	32	247	(21)	1782181
28	30.3	0.3	11.0	chr18	69839094	69839427	(10533858)	+	(CCTCC)n	Simple_repeat	1	335	(0)	1783744
20	14.9	0.0	6.0	chr18	70288985	70289034	(10084251)	+	GA-rich	Low_complexity	1	50	(0)	1784348
193	33.1	11.0	1.9	chr18	74524037	74524193	(5849092)	C	MIRb	SINE/MIR	(48)	220	48	1789999
3351	18.3	3.8	3.5	chr18	74524341	74524574	(5848711)	C	L1MB7	LINE/L1	(9)	6175	5937	1790000
95	27.4	1.2	3.9	chr18	74857885	74858216	(5515069)	+	(CTCC)n	Simple_repeat	1	336	(0)	1790405
19	10.4	4.7	2.2	chr18	75208549	75208591	(5164694)	+	G-rich	Low_complexity	1	45	(0)	1790756
11	20.7	0.0	2.9	chr18	75211942	75211976	(5161309)	+	G-rich	Low_complexity	1	35	(0)	1790762
28	20.9	2.7	2.6	chr18	75215917	75215991	(5157294)	+	(GT)n	Simple_repeat	1	77	(0)	1790763
15	17.0	5.0	0.0	chr18	75429903	75429942	(4943343)	+	(CTTCC)n	Simple_repeat	1	42	(0)	1790993
20	26.5	1.4	1.4	chr18	76496122	76496190	(3877095)	+	G-rich	Low_complexity	1	70	(0)	1792187
1485	21.3	1.0	1.4	chr18	76821338	76821628	(3551657)	+	AluJr	SINE/Alu	1	290	(22)	1792725
534	27.0	8.0	8.8	chr18	76821629	76821813	(3551472)	+	L1ME1	LINE/L1	5945	6124	(55)	1792724
241	16.2	0.0	0.0	chr18	76821815	76821851	(3551434)	+	Alu	SINE/Alu	100	136	(30)	1792726
47	14.4	3.3	4.8	chr18	77098904	77099030	(3274255)	+	(CCT)n	Simple_repeat	1	125	(0)	1793053
6762	23.3	10.9	5.0	chr18	79387822	79391279	(982006)	+	L1M4b	LINE/L1	29	3608	(3398)	1795464
23	22.1	0.0	0.0	chr18	79394058	79394110	(979175)	+	GA-rich	Low_complexity	1	53	(0)	1795468
12	9.7	0.0	0.0	chr18	80109933	80109954	(263331)	+	(CCCG)n	Simple_repeat	1	22	(0)	1796149
15	13.7	0.0	2.9	chr19	460288	460321	(58157295)	+	(CCCCTC)n	Simple_repeat	1	34	(0)	1796949
12	15.3	3.5	0.0	chr19	461976	462004	(58155612)	+	G-rich	Low_complexity	1	30	(0)	1796955
12	15.7	2.6	5.0	chr19	462094	462132	(58155484)	+	(CGCGGT)n	Simple_repeat	1	40	(0)	1796956
97	26.3	0.8	0.0	chr19	493781	494028	(58123588)	+	(TC)n	Simple_repeat	1	250	(0)	1797024
56	22.8	7.5	3.9	chr19	494029	494082	(58123534)	+	(CCTCTG)n	Simple_repeat	29	331	(0)	1797023
106	18.4	1.9	3.4	chr19	525769	526026	(58091590)	+	GA-rich	Low_complexity	1	263	(0)	1797083
1286	23.0	16.3	1.4	chr19	526064	526491	(58091125)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	1797084
17	14.1	2.4	2.4	chr19	663201	663241	(57954375)	+	(ACGCGC)n	Simple_repeat	1	42	(0)	1797314
13	19.7	7.2	4.0	chr19	663238	663306	(57954310)	+	G-rich	Low_complexity	1	74	(0)	1797315
14	29.1	2.3	4.5	chr19	663354	663439	(57954177)	+	G-rich	Low_complexity	1	88	(0)	1797315
268	24.9	21.5	0.0	chr19	663475	663667	(57953949)	+	L2a	LINE/L2	2922	3167	(259)	1797316
2367	7.8	0.7	0.3	chr19	664634	664940	(57952676)	C	AluSx	SINE/Alu	(4)	308	1	1797319
238	26.1	2.8	0.0	chr19	665163	665231	(57952385)	+	MIRb	SINE/MIR	49	119	(149)	1797320
715	25.4	8.5	6.6	chr19	737491	738101	(57879515)	C	L2a	LINE/L2	(188)	3238	2592	1797493
23	21.4	7.4	0.0	chr19	912957	913037	(57704579)	+	G-rich	Low_complexity	1	87	(0)	1797874
23	14.8	3.0	5.8	chr19	913039	913105	(57704511)	+	(GCCC)n	Simple_repeat	1	69	(0)	1797875
13	9.3	0.0	0.0	chr19	998747	998769	(57618847)	+	(CCCT)n	Simple_repeat	1	23	(0)	1798049
46	0.0	0.0	0.0	chr19	998886	998924	(57618692)	+	(GT)n	Simple_repeat	1	39	(0)	1798050
285	31.0	0.0	1.1	chr19	1026082	1026169	(57591447)	+	L2b	LINE/L2	3081	3167	(208)	1798099
15	24.6	1.9	1.9	chr19	1028682	1028743	(57588873)	+	G-rich	Low_complexity	1	62	(0)	1798104
13	17.5	0.0	2.9	chr19	1067112	1067145	(57550471)	+	G-rich	Low_complexity	1	34	(0)	1798166
190	24.6	9.1	1.8	chr19	1068800	1068911	(57548705)	C	L2b	LINE/L2	(160)	3215	3095	1798167
2024	16.1	2.5	4.6	chr19	1085091	1085420	(57532196)	C	THE1B	LTR/ERVL-MaLR	(35)	329	1	1798200
14	9.7	5.7	2.7	chr19	1173493	1173535	(57444081)	+	GA-rich	Low_complexity	1	44	(0)	1798317
14	4.1	3.7	3.6	chr19	1253269	1253295	(57364321)	+	(CCCT)n	Simple_repeat	1	28	(0)	1798468
29	3.2	0.0	0.0	chr19	1275918	1275949	(57341667)	+	(CCCT)n	Simple_repeat	1	32	(0)	1798488
1139	24.9	4.3	3.5	chr19	1384438	1384803	(57232813)	C	Charlie4a	DNA/hAT-Charlie	(11)	497	129	1798707
1151	15.5	21.1	0.0	chr19	1414824	1415062	(57202554)	C	AluJo	SINE/Alu	(8)	304	2	1798758
266	28.8	6.5	11.9	chr19	1415063	1415098	(57202518)	C	L1MC4	LINE/L1	(349)	7693	7660	1798754
11	18.4	2.4	4.8	chr19	1508287	1508327	(57109289)	+	G-rich	Low_complexity	1	42	(0)	1798898
16	22.0	0.0	3.9	chr19	1605463	1605513	(57012103)	+	(GCGCGG)n	Simple_repeat	1	51	(0)	1799129
15	13.9	0.0	0.0	chr19	1605494	1605517	(57012099)	+	(G)n	Simple_repeat	1	24	(0)	1799130
339	20.5	8.8	0.0	chr19	1605731	1605774	(57011842)	C	MIR3	SINE/MIR	(68)	140	89	1799131
184	36.5	5.7	0.0	chr19	1605775	1605889	(57011727)	+	MIR	SINE/MIR	2	123	(139)	1799132
981	28.6	13.0	0.9	chr19	1618053	1618774	(56998842)	+	L2a	LINE/L2	2408	3243	(183)	1799153
55	22.7	0.7	3.4	chr19	1664280	1664379	(56953237)	+	(CTCC)n	Simple_repeat	1	133	(14)	1799229
18	23.8	0.0	0.0	chr19	1664380	1664416	(56953200)	+	(C)n	Simple_repeat	1	37	(0)	1799230
55	22.7	0.7	3.4	chr19	1664417	1664425	(56953191)	+	(CTCC)n	Simple_repeat	134	147	(0)	1799229
2181	16.4	0.0	0.0	chr19	1664431	1664741	(56952875)	C	AluSx1	SINE/Alu	(1)	311	1	1799231
180	25.9	12.9	0.0	chr19	1746425	1746478	(56871138)	C	MIR3	SINE/MIR	(37)	171	110	1799447
249	21.0	3.6	8.0	chr19	1747795	1747882	(56869734)	+	L2c	LINE/L2	3066	3149	(238)	1799452
47	35.8	2.3	2.2	chr19	1758086	1758350	(56859266)	+	GA-rich	Low_complexity	1	271	(0)	1799461
35	30.5	2.5	3.1	chr19	1826378	1826536	(56791080)	+	G-rich	Low_complexity	1	163	(0)	1799583
217	14.6	0.0	2.5	chr19	1862606	1862652	(56754964)	C	MIR3	SINE/MIR	(59)	149	104	1799635
249	33.1	7.7	1.1	chr19	1875106	1875288	(56742328)	+	L1M5	LINE/L1	5570	5765	(359)	1799655
23	24.6	2.7	2.6	chr19	1905578	1905652	(56711964)	+	(CG)n	Simple_repeat	1	77	(0)	1799732
12	11.2	4.3	8.3	chr19	1930116	1930161	(56687455)	+	G-rich	Low_complexity	1	48	(0)	1799778
18	27.7	2.7	5.3	chr19	2013391	2013500	(56604116)	+	G-rich	Low_complexity	1	113	(0)	1799943
54	34.4	1.4	0.0	chr19	2016250	2016457	(56601159)	+	(CCAGACC)n	Simple_repeat	1	211	(0)	1799948
13	12.1	0.0	3.5	chr19	2050096	2050124	(56567492)	+	(CCCTG)n	Simple_repeat	1	29	(0)	1800034
2120	13.6	0.0	0.0	chr19	2168619	2168913	(56448703)	C	AluSx3	SINE/Alu	(16)	295	1	1800286
38	22.1	6.0	4.6	chr19	2209117	2209157	(56408459)	+	(CTCCT)n	Simple_repeat	1	143	(49)	1800354
39	27.5	3.6	1.4	chr19	2209158	2209294	(56408322)	+	(CT)n	Simple_repeat	1	142	(0)	1800355
38	22.1	6.0	4.6	chr19	2209295	2209306	(56408310)	+	(CTCCT)n	Simple_repeat	144	192	(0)	1800354
17	24.3	1.9	0.0	chr19	2270882	2270934	(56346682)	+	G-rich	Low_complexity	1	54	(0)	1800445
1083	13.4	0.6	0.0	chr19	2416094	2416250	(56201366)	+	AluJb	SINE/Alu	138	295	(17)	1800759
400	29.0	4.2	4.0	chr19	2507173	2507369	(56110247)	+	MIRc	SINE/MIR	22	207	(61)	1800969
17	40.5	3.8	1.5	chr19	2507518	2507546	(56110070)	+	(CCCTCC)n	Simple_repeat	1	99	(38)	1800970
47	19.2	2.1	0.0	chr19	2507547	2507640	(56109976)	+	(TC)n	Simple_repeat	1	96	(0)	1800971
1915	14.4	4.0	0.3	chr19	2601631	2601921	(56015695)	+	AluJo	SINE/Alu	1	302	(10)	1801206
24	8.8	0.0	0.0	chr19	2601923	2601959	(56015657)	+	(AGGGG)n	Simple_repeat	1	37	(0)	1801207
2487	7.0	0.0	0.0	chr19	2602056	2602354	(56015262)	+	AluSx	SINE/Alu	2	300	(12)	1801208
352	30.5	10.2	6.6	chr19	2739411	2739684	(55877932)	+	L2a	LINE/L2	3078	3413	(13)	1801558
369	29.6	2.3	0.0	chr19	2962110	2962234	(55655382)	+	L1ME1	LINE/L1	6039	6166	(13)	1802025
1053	22.3	7.7	3.8	chr19	2969098	2969410	(55648206)	+	MLT1C	LTR/ERVL-MaLR	140	465	(2)	1802045
842	27.7	15.1	4.2	chr19	2983201	2983942	(55633674)	C	L2a	LINE/L2	(2)	3424	2570	1802087
2187	11.7	1.0	0.0	chr19	2984470	2984767	(55632849)	C	AluSx	SINE/Alu	(11)	301	1	1802088
31	23.2	3.2	4.6	chr19	3029117	3029242	(55588374)	+	(GCGGCG)n	Simple_repeat	1	130	(0)	1802206
195	19.1	0.0	4.5	chr19	3035381	3035424	(55582192)	+	MIR1_Amn	SINE/MIR	114	155	(75)	1802225
191	30.0	0.0	0.0	chr19	3036691	3036740	(55580876)	+	MIR3	SINE/MIR	110	159	(49)	1802228
196	30.5	2.4	0.0	chr19	3056822	3056903	(55560713)	+	L2b	LINE/L2	2821	2904	(515)	1802278
274	32.4	10.9	3.6	chr19	3056910	3057104	(55560512)	+	L2b	LINE/L2	3073	3283	(92)	1802278
628	25.7	1.1	2.7	chr19	3311732	3311939	(55305677)	C	L2a	LINE/L2	(0)	3426	3180	1802900
17	23.2	1.7	3.3	chr19	3359550	3359608	(55258008)	+	(CCCT)n	Simple_repeat	1	60	(0)	1803050
42	30.4	5.0	1.3	chr19	3366345	3366566	(55251050)	+	G-rich	Low_complexity	1	233	(0)	1803067
13	17.1	0.0	8.5	chr19	3367228	3367274	(55250342)	+	G-rich	Low_complexity	1	47	(0)	1803069
32	0.0	0.0	0.0	chr19	3367348	3367377	(55250239)	+	(GATTCTG)n	Simple_repeat	1	30	(0)	1803070
450	27.8	0.8	2.1	chr19	3385251	3385390	(55232226)	+	MIR	SINE/MIR	34	170	(92)	1803120
17	16.5	1.9	5.6	chr19	3459649	3459701	(55157915)	+	G-rich	Low_complexity	1	54	(0)	1803344
894	14.8	1.8	0.0	chr19	3682724	3682885	(54934731)	+	MLT1F	LTR/ERVL-MaLR	320	484	(64)	1803770
290	28.3	18.2	1.2	chr19	3682929	3683264	(54934352)	+	L2b	LINE/L2	2940	3345	(30)	1803771
13	32.3	0.0	1.7	chr19	3721714	3721772	(54895844)	+	GA-rich	Low_complexity	1	59	(0)	1803877
13	18.7	0.0	5.0	chr19	3721927	3721966	(54895650)	+	G-rich	Low_complexity	1	40	(0)	1803878
23	15.4	6.5	1.5	chr19	3870504	3870565	(54747051)	+	GA-rich	Low_complexity	1	66	(0)	1804202
1050	22.2	1.3	0.0	chr19	3870566	3870786	(54746830)	+	L1MC3	LINE/L1	7013	7236	(549)	1804203
332	30.1	9.9	12.5	chr19	3893844	3894071	(54723545)	+	L2a	LINE/L2	2919	3137	(289)	1804267
43	15.4	2.7	4.4	chr19	3933304	3933414	(54684202)	+	GA-rich	Low_complexity	1	114	(0)	1804375
278	27.1	0.0	6.9	chr19	4058268	4058384	(54559232)	+	MIR3	SINE/MIR	42	151	(57)	1804641
253	20.9	3.5	7.4	chr19	4063540	4063664	(54553952)	+	MIRc	SINE/MIR	84	195	(35)	1804649
17	4.3	0.0	0.0	chr19	4064001	4064024	(54553592)	+	(AACA)n	Simple_repeat	1	24	(0)	1804650
14	12.1	8.2	6.1	chr19	4067704	4067764	(54549852)	+	(GGCCGCG)n	Simple_repeat	1	66	(0)	1804658
226	20.9	3.1	3.5	chr19	4145112	4145754	(54471862)	+	GA-rich	Low_complexity	1	663	(0)	1804864
1903	16.1	0.0	1.0	chr19	4173800	4174098	(54443518)	+	AluJo	SINE/Alu	3	298	(14)	1804948
197	37.8	7.4	0.0	chr19	4182035	4182185	(54435431)	+	L2	LINE/L2	2786	2948	(471)	1804965
2109	12.6	0.0	0.0	chr19	4218279	4218599	(54399017)	C	AluSq2	SINE/Alu	(0)	313	1	1805059
23	15.8	6.9	0.0	chr19	4218657	4218745	(54398871)	+	(TTTC)n	Simple_repeat	1	95	(0)	1805060
1514	14.8	0.0	6.6	chr19	4218746	4219002	(54398614)	C	AluJb	SINE/Alu	(7)	305	66	1805061
21	3.2	0.0	5.6	chr19	4278978	4279013	(54338603)	+	(CCCCT)n	Simple_repeat	1	36	(0)	1805246
246	28.8	5.7	10.8	chr19	4358437	4358508	(54259108)	+	MER113A	DNA/hAT-Charlie	49	117	(197)	1805442
2033	14.2	0.3	0.0	chr19	4358509	4358796	(54258820)	+	AluSx1	SINE/Alu	4	292	(20)	1805443
211	33.1	3.7	0.0	chr19	4375256	4375342	(54242274)	C	MIR1_Amn	SINE/MIR	(49)	159	70	1805459
60	24.2	6.5	0.0	chr19	4390364	4390564	(54227052)	+	GA-rich	Low_complexity	1	214	(0)	1805484
298	36.4	0.0	4.1	chr19	4399785	4399907	(54217709)	+	L1ME4b	LINE/L1	726	843	(49)	1805505
271	35.0	9.0	3.4	chr19	4455818	4456040	(54161576)	+	L2a	LINE/L2	3122	3387	(39)	1805614
15	12.6	8.9	2.0	chr19	4457698	4457742	(54159874)	+	(GGC)n	Simple_repeat	1	49	(0)	1805615
1538	10.9	17.3	0.0	chr19	4620438	4620676	(53996940)	+	AluSg	SINE/Alu	1	289	(21)	1806031
2227	10.5	0.0	0.7	chr19	4622434	4622728	(53994888)	C	AluSx	SINE/Alu	(19)	293	1	1806035
27	27.9	0.0	2.4	chr19	4702790	4702872	(53914744)	+	GA-rich	Low_complexity	1	83	(0)	1806224
404	27.4	3.9	2.8	chr19	4702895	4703074	(53914542)	C	MER20	DNA/hAT-Charlie	(0)	219	38	1806225
22	19.1	9.4	2.6	chr19	4723560	4723665	(53893951)	+	G-rich	Low_complexity	1	116	(0)	1806263
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
2228	8.9	1.7	0.0	chr19	4730445	4730735	(53886881)	+	AluSp	SINE/Alu	1	296	(17)	1806286
1616	28.9	11.2	5.9	chr19	4730736	4731314	(53886302)	+	L2a	LINE/L2	2643	3224	(202)	1806282
18	22.6	0.0	3.6	chr19	4867760	4867814	(53749802)	+	(CCCGC)n	Simple_repeat	1	55	(0)	1806716
1028	27.9	12.4	0.9	chr19	4870078	4870316	(53747300)	C	L2a	LINE/L2	(240)	3186	2935	1806723
194	18.4	9.3	0.0	chr19	4870318	4870366	(53747250)	C	MIR1_Amn	SINE/MIR	(105)	125	72	1806725
16	9.8	0.0	0.0	chr19	4870458	4870479	(53747137)	+	(T)n	Simple_repeat	1	22	(0)	1806726
606	25.9	18.5	2.9	chr19	5154076	5154460	(53463156)	C	L2	LINE/L2	(354)	3065	2607	1807251
16	21.0	5.0	6.0	chr19	5229352	5229431	(53388185)	+	GA-rich	Low_complexity	1	84	(0)	1807411
17	7.6	4.1	7.8	chr19	5229440	5229488	(53388128)	+	(CCCGC)n	Simple_repeat	1	51	(0)	1807412
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
1671	26.5	5.4	2.1	chr19	5309611	5310306	(53307310)	+	L2a	LINE/L2	2480	3215	(211)	1807623
1434	29.7	5.4	3.9	chr19	5369771	5370520	(53247096)	+	L2a	LINE/L2	2500	3278	(148)	1807789
12	13.2	0.0	9.8	chr19	5436554	5436594	(53181022)	+	(GGAGTAG)n	Simple_repeat	1	41	(0)	1807982
1333	27.7	3.6	5.8	chr19	5470410	5470923	(53146693)	+	L1ME2	LINE/L1	5585	6086	(78)	1808082
19	3.9	0.0	0.0	chr19	5539526	5539552	(53078064)	+	(GGGGA)n	Simple_repeat	1	27	(0)	1808298
490	29.2	8.2	2.0	chr19	5697248	5697544	(52920072)	C	L2a	LINE/L2	(187)	3239	2923	1808600
189	32.0	2.6	0.7	chr19	5697553	5697700	(52919916)	C	L2	LINE/L2	(439)	2980	2830	1808601
12	27.7	2.0	2.0	chr19	5719822	5719871	(52897745)	+	(CCG)n	Simple_repeat	1	51	(0)	1808643
13	11.2	3.2	3.1	chr19	5804091	5804121	(52813495)	+	(CAGCC)n	Simple_repeat	1	32	(0)	1808887
13	10.7	3.1	3.0	chr19	5804953	5804984	(52812632)	+	(GGCGG)n	Simple_repeat	1	33	(0)	1808888
13	22.7	2.3	2.3	chr19	5805035	5805077	(52812539)	+	(GCG)n	Simple_repeat	1	44	(0)	1808889
2327	11.5	0.0	0.3	chr19	5823135	5823446	(52794170)	+	AluSx1	SINE/Alu	1	311	(1)	1808944
181	29.7	10.8	0.0	chr19	5823450	5823523	(52794093)	C	L2b	LINE/L2	(279)	3108	3026	1808941
199	31.8	16.8	4.4	chr19	5826360	5826494	(52791122)	C	MIRb	SINE/MIR	(80)	188	34	1808949
7406	13.3	1.6	4.7	chr19	5847626	5849489	(52768127)	+	HERVH-int	LTR/ERV1	1	1990	(5723)	1808987
13	23.9	4.8	3.0	chr19	5915329	5915391	(52702225)	+	(CCTGC)n	Simple_repeat	1	66	(0)	1809135
29	9.8	1.7	4.9	chr19	5957518	5957577	(52660039)	+	(CTCC)n	Simple_repeat	1	61	(0)	1809172
629	29.8	7.7	1.5	chr19	5960043	5960311	(52657305)	+	MLT1K	LTR/ERVL-MaLR	305	591	(4)	1809175
19	7.2	11.4	0.0	chr19	5979913	5979958	(52637658)	+	(TCCCT)n	Simple_repeat	1	51	(0)	1809207
1971	14.7	1.7	0.3	chr19	5979959	5980250	(52637366)	C	AluSx	SINE/Alu	(13)	299	4	1809208
747	19.5	1.0	8.9	chr19	6263940	6264153	(52353463)	+	L1MB7	LINE/L1	5988	6184	(0)	1809772
18	20.7	1.9	1.9	chr19	6264202	6264253	(52353363)	+	(TCCC)n	Simple_repeat	1	53	(0)	1809773
23	18.3	4.7	1.5	chr19	6424702	6424765	(52192851)	+	(GGC)n	Simple_repeat	1	67	(0)	1810203
123	16.7	3.4	5.7	chr19	6429299	6429653	(52187963)	+	GA-rich	Low_complexity	1	367	(0)	1810214
13	12.7	0.0	9.5	chr19	6459847	6459888	(52157728)	+	G-rich	Low_complexity	1	42	(0)	1810295
358	35.4	11.5	1.4	chr19	6460691	6460910	(52156706)	C	MIR	SINE/MIR	(1)	261	23	1810296
351	23.7	0.0	0.0	chr19	6721226	6721301	(51896315)	C	L2c	LINE/L2	(219)	3168	3093	1810989
401	31.6	10.3	0.9	chr19	6736398	6736568	(51881048)	C	MIRb	SINE/MIR	(58)	210	23	1811025
31	8.3	2.0	0.0	chr19	7197322	7197372	(51420244)	+	(GAGT)n	Simple_repeat	1	52	(0)	1812249
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
22	30.0	2.2	1.1	chr19	7294332	7294350	(51323266)	+	G-rich	Low_complexity	55	93	(0)	1812537
14	5.0	0.0	0.0	chr19	7686398	7686418	(50931198)	+	(GAG)n	Simple_repeat	1	21	(0)	1813490
205	27.9	16.5	0.0	chr19	7686424	7686509	(50931107)	C	MIRc	SINE/MIR	(81)	187	85	1813491
2164	11.2	3.0	0.0	chr19	7686515	7686808	(50930808)	C	AluSx1	SINE/Alu	(8)	304	2	1813492
1800	15.0	0.3	7.8	chr19	7887841	7888173	(50729443)	C	AluJo	SINE/Alu	(4)	308	1	1813920
192	33.9	0.0	11.0	chr19	8002619	8002764	(50614852)	C	L2c	LINE/L2	(173)	3214	3085	1814125
659	28.0	9.5	2.9	chr19	8308608	8308853	(50308763)	+	L2a	LINE/L2	3163	3426	(0)	1814980
106	25.1	3.0	0.7	chr19	8352112	8352392	(50265224)	+	GA-rich	Low_complexity	14	301	(0)	1815105
1310	28.7	11.9	2.7	chr19	8396325	8397353	(50220263)	C	L2a	LINE/L2	(1)	3425	2263	1815209
922	12.0	0.0	0.8	chr19	8447604	8447736	(50169880)	+	AluJb	SINE/Alu	2	133	(179)	1815356
14	7.8	0.0	6.5	chr19	8451524	8451554	(50166062)	+	(TCCCT)n	Simple_repeat	1	31	(0)	1815363
1230	21.7	3.5	1.8	chr19	8451555	8451831	(50165785)	C	AluJb	SINE/Alu	(30)	282	1	1815364
859	16.7	0.0	0.7	chr19	8500133	8500270	(50117346)	C	FRAM	SINE/Alu	(38)	138	2	1815429
582	31.1	8.8	8.3	chr19	8500277	8500763	(50116853)	+	L2a	LINE/L2	2614	3156	(270)	1815430
17	31.5	2.6	0.0	chr19	8609153	8609230	(50008386)	+	(TGTGTG)n	Simple_repeat	1	80	(0)	1815704
29	0.0	0.0	0.0	chr19	8609235	8609259	(50008357)	+	(TG)n	Simple_repeat	1	25	(0)	1815705
422	19.7	0.0	0.0	chr19	9621595	9621665	(48995951)	+	FLAM_C	SINE/Alu	1	71	(62)	1817789
15	25.6	2.9	4.2	chr19	9945616	9945685	(48671931)	+	GA-rich	Low_complexity	1	72	(0)	1818521
20	12.6	0.0	0.0	chr19	9982268	9982303	(48635313)	+	(CCTCT)n	Simple_repeat	1	36	(0)	1818613
402	30.0	11.7	5.3	chr19	9982317	9982636	(48634980)	+	L2a	LINE/L2	3039	3381	(6)	1818614
765	27.6	14.2	5.3	chr19	10098897	10099304	(48518312)	+	L2a	LINE/L2	2501	2923	(496)	1818898
2492	5.7	0.0	0.3	chr19	10099305	10099601	(48518015)	+	AluY	SINE/Alu	11	306	(5)	1818899
16	14.6	7.3	5.5	chr19	10111608	10111688	(48505928)	+	G-rich	Low_complexity	1	82	(0)	1818924
13	9.7	0.0	0.0	chr19	10119656	10119677	(48497939)	+	(TCC)n	Simple_repeat	1	22	(0)	1818934
13	15.9	2.7	2.6	chr19	10404825	10404861	(48212755)	+	(TCCCCC)n	Simple_repeat	1	38	(0)	1819651
14	15.9	0.0	0.0	chr19	10568987	10569014	(48048602)	+	(CGC)n	Simple_repeat	1	28	(0)	1820117
18	20.5	1.9	1.9	chr19	10654293	10654344	(47963272)	+	(CCCG)n	Simple_repeat	1	53	(0)	1820365
244	28.0	15.7	0.8	chr19	10766569	10766687	(47850929)	C	L2b	LINE/L2	(0)	3375	3236	1820637
317	32.5	5.5	6.1	chr19	10864496	10864823	(47752793)	C	L2b	LINE/L2	(528)	2891	2566	1820864
2224	11.4	0.3	0.0	chr19	10924960	10925249	(47692367)	+	AluSx	SINE/Alu	10	300	(12)	1821006
1805	16.7	0.3	1.7	chr19	10935812	10936104	(47681512)	C	AluJb	SINE/Alu	(23)	289	1	1821036
36	28.3	3.0	4.8	chr19	10960847	10961046	(47656570)	+	G-rich	Low_complexity	1	206	(0)	1821124
12	8.4	0.0	6.9	chr19	11138814	11138842	(47478774)	+	(CTGCC)n	Simple_repeat	1	29	(0)	1821543
14	16.7	2.9	0.0	chr19	11197889	11197922	(47419694)	+	G-rich	Low_complexity	1	35	(0)	1821708
418	19.9	0.0	0.0	chr19	11198073	11198160	(47419456)	+	MIR	SINE/MIR	105	191	(71)	1821709
12	29.0	3.3	1.6	chr19	11355535	11355594	(47262022)	+	(GGC)n	Simple_repeat	1	62	(0)	1822121
1775	13.1	3.3	0.8	chr19	11382218	11382361	(47235255)	C	AluJo	SINE/Alu	(29)	283	137	1822182
304	22.9	0.0	0.0	chr19	11384508	11384568	(47233048)	+	MIRc	SINE/MIR	85	145	(123)	1822184
16	8.7	0.0	0.0	chr19	11436119	11436143	(47181473)	+	(TGC)n	Simple_repeat	1	25	(0)	1822333
41	32.1	0.0	0.0	chr19	11452467	11452593	(47165023)	+	(TT)n	Simple_repeat	1	127	(0)	1822368
97	10.1	1.8	2.9	chr19	11587539	11587580	(47030036)	+	(GAGAG)n	Simple_repeat	1	55	(119)	1822733
20	24.0	0.0	0.0	chr19	11587581	11587622	(47029994)	+	G-rich	Low_complexity	1	42	(0)	1822734
97	10.1	1.8	2.9	chr19	11587623	11587709	(47029907)	+	(GAGAG)n	Simple_repeat	56	174	(0)	1822733
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
6408	10.7	2.8	1.2	chr19	11988415	11989352	(46628264)	C	LTR13_	LTR/ERVK	(0)	954	1	1823531
802	12.0	3.0	8.4	chr19	12485398	12485539	(46132077)	C	FLAM_C	SINE/Alu	(7)	136	3	1824523
597	12.8	0.0	20.1	chr19	12610207	12610370	(46007246)	C	FLAM_A	SINE/Alu	(11)	131	1	1824830
422	30.9	10.2	5.4	chr19	12676536	12677070	(45940546)	+	L2a	LINE/L2	2843	3393	(33)	1824973
14	17.2	5.1	0.0	chr19	12788700	12788738	(45828878)	+	(CTGCC)n	Simple_repeat	1	41	(0)	1825214
37	25.8	2.8	5.5	chr19	12838391	12838437	(45779179)	+	(CGC)n	Simple_repeat	1	56	(127)	1825335
15	11.6	0.0	0.0	chr19	12838438	12838465	(45779151)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1825336
37	25.8	2.8	5.5	chr19	12838466	12838568	(45779048)	+	(CGC)n	Simple_repeat	57	183	(0)	1825335
1003	23.8	10.4	4.3	chr19	12965023	12965417	(45652199)	C	L2	LINE/L2	(537)	2882	2461	1825650
391	30.8	14.4	0.8	chr19	12965786	12965915	(45651701)	+	L2a	LINE/L2	3115	3268	(158)	1825651
44	0.0	0.0	0.0	chr19	12988270	12988307	(45629309)	+	(GT)n	Simple_repeat	1	38	(0)	1825713
20	25.1	4.0	2.6	chr19	12995102	12995175	(45622441)	+	(TG)n	Simple_repeat	1	77	(0)	1825727
23	19.2	0.0	3.4	chr19	12995313	12995320	(45622296)	+	(GCGTGT)n	Simple_repeat	1	57	(0)	1825728
29	16.2	0.0	0.0	chr19	12995321	12995369	(45622247)	+	(GT)n	Simple_repeat	1	49	(0)	1825729
29	17.1	1.4	2.9	chr19	12995372	12995440	(45622176)	+	(CCGC)n	Simple_repeat	1	70	(0)	1825730
18	14.7	0.0	0.0	chr19	13023167	13023196	(45594420)	+	(GA)n	Simple_repeat	1	30	(0)	1825768
18	12.2	0.0	0.0	chr19	13023241	13023267	(45594349)	+	(CA)n	Simple_repeat	1	27	(0)	1825769
29	23.1	1.2	2.3	chr19	13023271	13023355	(45594261)	+	(CCCT)n	Simple_repeat	1	86	(0)	1825770
16	6.3	9.1	0.0	chr19	13023920	13023963	(45593653)	+	(TCC)n	Simple_repeat	1	47	(0)	1825773
18	4.5	0.0	0.0	chr19	13026722	13026744	(45590872)	+	(CT)n	Simple_repeat	1	23	(0)	1825778
29	0.0	0.0	0.0	chr19	13026745	13026769	(45590847)	+	(TG)n	Simple_repeat	1	25	(0)	1825779
12	14.7	3.3	0.0	chr19	13055437	13055466	(45562150)	+	(GCCTCT)n	Simple_repeat	1	31	(0)	1825813
16	4.5	0.0	0.0	chr19	13057810	13057832	(45559784)	+	(CCCT)n	Simple_repeat	1	23	(0)	1825816
236	31.1	14.9	0.5	chr19	13074425	13074647	(45542969)	C	L2c	LINE/L2	(508)	2911	2651	1825829
296	24.2	2.4	13.0	chr19	13074715	13074787	(45542829)	+	MER96B	DNA/hAT-Tip100	248	320	(97)	1825830
27	0.0	0.0	0.0	chr19	13095182	13095207	(45522409)	+	(TCCC)n	Simple_repeat	1	26	(0)	1825863
26	21.7	1.0	6.2	chr19	13118791	13118886	(45498730)	+	G-rich	Low_complexity	1	97	(0)	1825910
13	30.0	3.3	0.0	chr19	13139644	13139704	(45477912)	+	G-rich	Low_complexity	1	63	(0)	1825962
12	17.2	2.2	6.5	chr19	13151788	13151832	(45465784)	+	(CCCGCCG)n	Simple_repeat	1	46	(0)	1825985
12	7.5	6.7	3.1	chr19	13163845	13163874	(45453742)	+	(GCCCT)n	Simple_repeat	1	32	(0)	1826010
402	25.3	7.8	1.3	chr19	13396759	13396914	(45220702)	+	LTR33	LTR/ERVL	49	215	(300)	1826650
107	31.1	1.4	0.8	chr19	13597382	13597743	(45019873)	+	(ATGG)n	Simple_repeat	1	367	(0)	1827223
279	33.5	3.3	0.9	chr19	13775654	13775789	(44841827)	+	MIRb	SINE/MIR	29	175	(93)	1827762
917	27.9	14.6	1.4	chr19	13775804	13775953	(44841663)	+	L2a	LINE/L2	2424	2610	(809)	1827763
2153	10.7	1.3	0.3	chr19	13775954	13776124	(44841492)	C	AluSg	SINE/Alu	(9)	301	132	1827764
194	19.6	1.8	9.7	chr19	13794921	13794982	(44822634)	C	MIRc	SINE/MIR	(146)	122	66	1827823
14	7.2	0.0	8.6	chr19	13842976	13843010	(44774606)	+	G-rich	Low_complexity	1	35	(0)	1827937
187	22.7	0.0	0.0	chr19	13843498	13843541	(44774075)	C	L3b	LINE/CR1	(196)	5036	4993	1827938
190	31.6	14.7	3.9	chr19	13859612	13859792	(44757824)	+	L2b	LINE/L2	3095	3298	(77)	1827988
305	30.6	10.4	4.0	chr19	13859850	13859922	(44757694)	C	L2a	LINE/L2	(0)	3426	3349	1827989
955	11.4	0.0	3.6	chr19	13859923	13860062	(44757554)	+	FLAM_C	SINE/Alu	1	135	(8)	1827990
14	16.9	3.0	0.0	chr19	13862328	13862360	(44755256)	+	GA-rich	Low_complexity	1	34	(0)	1827994
212	28.0	0.0	0.0	chr19	13953205	13953254	(44664362)	+	L2c	LINE/L2	3268	3317	(70)	1828190
213	23.2	5.1	1.8	chr19	13953249	13953305	(44664311)	+	L2b	LINE/L2	3237	3295	(80)	1828205
187	21.1	3.7	3.7	chr19	13953468	13953521	(44664095)	+	L2b	LINE/L2	3264	3317	(70)	1828205
13	17.9	2.4	4.7	chr19	14057474	14057515	(44560101)	+	(CCT)n	Simple_repeat	1	43	(0)	1828465
13	26.0	2.9	4.2	chr19	14057598	14057626	(44559990)	+	(GGAGGC)n	Simple_repeat	1	67	(0)	1828466
17	22.7	0.0	0.0	chr19	14057627	14057662	(44559954)	+	G-rich	Low_complexity	1	36	(0)	1828467
18	13.5	0.0	0.0	chr19	14080875	14080907	(44536709)	+	(GGAGG)n	Simple_repeat	1	33	(0)	1828528
226	37.1	2.8	0.0	chr19	14081002	14081106	(44536510)	+	MIR1_Amn	SINE/MIR	29	136	(94)	1828529
15	32.9	0.0	0.0	chr19	14090475	14090531	(44527085)	+	(CCC)n	Simple_repeat	1	57	(0)	1828548
18	0.0	0.0	0.0	chr19	14090582	14090601	(44527015)	+	(A)n	Simple_repeat	1	20	(0)	1828549
32	17.2	1.7	0.0	chr19	14090601	14090660	(44526956)	+	GA-rich	Low_complexity	1	61	(0)	1828550
15	21.8	0.0	0.0	chr19	14090671	14090707	(44526909)	+	(CACA)n	Simple_repeat	1	37	(0)	1828551
20	12.7	2.1	4.2	chr19	14090762	14090808	(44526808)	+	(CGC)n	Simple_repeat	1	48	(0)	1828552
13	21.0	6.7	0.0	chr19	14102917	14102961	(44514655)	+	G-rich	Low_complexity	1	48	(0)	1828591
348	34.4	4.7	11.0	chr19	14103012	14103328	(44514288)	C	L2b	LINE/L2	(5)	3370	3075	1828592
42	7.1	1.7	0.0	chr19	14166546	14166604	(44451012)	+	(AG)n	Simple_repeat	1	60	(0)	1828723
36	25.6	2.7	3.9	chr19	14248619	14248767	(44368849)	+	(CCCT)n	Simple_repeat	1	153	(0)	1828949
12	29.5	2.0	0.0	chr19	14249450	14249499	(44368117)	+	(CCCCCT)n	Simple_repeat	1	51	(0)	1828950
773	26.6	2.3	3.6	chr19	14519980	14520201	(44097415)	+	MIR	SINE/MIR	23	241	(21)	1829703
2250	10.3	0.0	0.0	chr19	14554787	14555076	(44062540)	C	AluSc	SINE/Alu	(19)	290	1	1829794
1042	29.0	5.4	8.1	chr19	15175554	15175590	(43442026)	C	L2a	LINE/L2	(191)	3235	3202	1831298
33	5.7	0.0	0.0	chr19	15175591	15175627	(43441989)	+	(AC)n	Simple_repeat	1	37	(0)	1831300
1042	29.0	5.4	8.1	chr19	15175628	15175918	(43441698)	C	L2a	LINE/L2	(225)	3201	2925	1831298
188	33.1	9.8	1.3	chr19	15202687	15202836	(43414780)	C	L2b	LINE/L2	(61)	3314	3151	1831359
239	33.3	0.0	0.0	chr19	15202888	15202959	(43414657)	C	L2a	LINE/L2	(0)	3426	3355	1831360
380	30.0	4.2	0.0	chr19	15323962	15324108	(43293508)	C	MIR3	SINE/MIR	(105)	163	5	1831577
192	33.0	11.1	0.0	chr19	15377911	15377998	(43239618)	+	L2b	LINE/L2	3271	3369	(6)	1831696
17	14.2	0.0	0.0	chr19	15380373	15380403	(43237213)	+	(CCT)n	Simple_repeat	1	31	(0)	1831699
1103	18.9	1.9	7.5	chr19	16041330	16041609	(42576007)	+	L1MDa	LINE/L1	118	381	(6252)	1832972
566	29.0	8.7	7.1	chr19	16041789	16042126	(42575490)	+	ORSL-2b	DNA/hAT-Tip100	34	377	(131)	1832975
19	18.4	4.1	0.0	chr19	16076233	16076281	(42541335)	+	GA-rich	Low_complexity	1	51	(0)	1833070
13	25.8	2.2	0.0	chr19	16076660	16076705	(42540911)	+	(AGCGCG)n	Simple_repeat	1	47	(0)	1833071
12	15.5	3.5	0.0	chr19	16111471	16111499	(42506117)	+	(CACGC)n	Simple_repeat	1	30	(0)	1833148
12	11.6	4.7	6.7	chr19	16111699	16111741	(42505875)	+	(GCGCTCC)n	Simple_repeat	1	45	(0)	1833149
15	5.5	0.0	0.0	chr19	16413614	16413632	(42203984)	+	(A)n	Simple_repeat	1	19	(0)	1833880
1693	19.3	13.5	2.7	chr19	16710694	16710984	(41906632)	C	MLT1F1	LTR/ERVL-MaLR	(160)	409	61	1834538
109	3.7	4.3	0.0	chr19	16710996	16711134	(41906482)	+	(TTTC)n	Simple_repeat	1	145	(0)	1834540
29	15.1	5.6	1.3	chr19	16711135	16711216	(41906400)	+	(TTCCC)n	Simple_repeat	1	85	(0)	1834541
2024	9.0	6.8	1.8	chr19	16711217	16711357	(41906259)	C	AluSx1	SINE/Alu	(18)	294	134	1834542
3587	16.0	0.5	5.4	chr19	16822996	16823107	(41794509)	+	MER41B	LTR/ERV1	525	630	(4)	1834894
4071	7.9	2.0	2.9	chr19	16823253	16823410	(41794206)	+	MER41A	LTR/ERV1	1	155	(399)	1834900
238	22.5	6.6	1.4	chr19	17076614	17076685	(41540931)	+	MIR	SINE/MIR	59	134	(128)	1835438
25	18.2	0.0	3.3	chr19	17105951	17106011	(41511605)	+	(CTCTC)n	Simple_repeat	1	61	(0)	1835499
1452	15.5	3.9	0.9	chr19	17106025	17106250	(41511366)	C	AluJr	SINE/Alu	(34)	278	46	1835500
579	13.8	11.2	4.3	chr19	17215131	17215246	(41402370)	C	AluJr	SINE/Alu	(187)	125	1	1835760
1500	29.0	12.4	1.4	chr19	17260629	17261289	(41356327)	+	L2	LINE/L2	2299	3042	(377)	1835869
358	27.2	13.0	2.2	chr19	17303806	17303948	(41313668)	C	MIRb	SINE/MIR	(32)	176	7	1835983
231	36.2	6.1	2.5	chr19	17333841	17334044	(41283572)	+	L2c	LINE/L2	2916	3127	(260)	1836047
659	26.1	10.0	1.0	chr19	17334054	17334254	(41283362)	C	MIR	SINE/MIR	(6)	256	36	1836048
193	10.3	0.0	0.0	chr19	17335054	17335082	(41282534)	+	MIRc	SINE/MIR	115	143	(125)	1836050
382	32.4	9.2	0.0	chr19	17336833	17337039	(41280577)	C	L2b	LINE/L2	(158)	3217	2990	1836060
180	34.1	5.5	0.0	chr19	17337067	17337151	(41280465)	C	L3	LINE/CR1	(3010)	1089	1000	1836061
47	8.0	5.0	0.0	chr19	17342050	17342129	(41275487)	+	(CTTCCC)n	Simple_repeat	1	84	(0)	1836066
1005	11.9	0.0	0.0	chr19	17342137	17342270	(41275346)	C	AluSx	SINE/Alu	(45)	267	134	1836067
26	0.0	0.0	0.0	chr19	17349123	17349154	(41268462)	+	(TTTC)n	Simple_repeat	1	32	(0)	1836088
81	0.0	0.0	0.0	chr19	17349161	17349229	(41268387)	+	(TC)n	Simple_repeat	1	69	(0)	1836089
2360	11.2	0.0	1.0	chr19	17349230	17349536	(41268080)	C	AluSz	SINE/Alu	(7)	305	1	1836090
33	25.9	1.0	2.0	chr19	17395197	17395295	(41222321)	+	(CTCCTC)n	Simple_repeat	1	100	(0)	1836217
16	20.6	4.0	6.3	chr19	17404299	17404374	(41213242)	+	(TCTCCC)n	Simple_repeat	1	79	(0)	1836244
13	23.9	3.1	4.5	chr19	17404347	17404410	(41213206)	+	(CCTTCTC)n	Simple_repeat	1	66	(0)	1836245
259	18.9	8.6	3.1	chr19	17447802	17447909	(41169707)	+	MIRc	SINE/MIR	25	146	(122)	1836375
32	18.7	2.4	2.4	chr19	17447960	17448042	(41169574)	+	GA-rich	Low_complexity	1	85	(0)	1836376
749	28.3	14.1	4.9	chr19	17671903	17672330	(40945286)	+	MLT1J	LTR/ERVL-MaLR	1	474	(38)	1836968
14	14.8	5.1	2.4	chr19	17686817	17686855	(40930761)	+	GA-rich	Low_complexity	1	41	(0)	1837006
14	20.7	2.6	0.0	chr19	17687300	17687338	(40930278)	+	(CTCC)n	Simple_repeat	1	40	(0)	1837007
84	11.0	3.8	1.8	chr19	17718479	17718636	(40898980)	+	GA-rich	Low_complexity	1	164	(0)	1837101
287	30.9	8.1	11.8	chr19	17718702	17718947	(40898669)	+	MIRb	SINE/MIR	30	265	(3)	1837102
695	29.0	9.6	1.5	chr19	17778935	17779662	(40837954)	C	L2a	LINE/L2	(23)	3403	2474	1837257
18	20.8	7.6	0.0	chr19	17795057	17795122	(40822494)	+	G-rich	Low_complexity	1	71	(0)	1837292
402	31.4	8.0	1.7	chr19	17947249	17947423	(40670193)	+	MIR	SINE/MIR	46	232	(30)	1837696
447	11.7	3.1	6.0	chr19	17948847	17948946	(40668670)	+	MER53	DNA/hAT	1	97	(96)	1837699
296	31.3	2.2	2.2	chr19	17950214	17950347	(40667269)	C	L2b	LINE/L2	(221)	3154	3021	1837700
72	27.9	1.7	5.0	chr19	17957093	17957382	(40660234)	+	G-rich	Low_complexity	4	283	(0)	1837713
866	25.4	6.6	2.8	chr19	17957396	17957968	(40659648)	C	L2b	LINE/L2	(187)	3239	2625	1837709
379	24.2	6.9	7.5	chr19	18063565	18063738	(40553878)	C	L2c	LINE/L2	(224)	3163	2991	1837983
278	25.7	4.1	0.0	chr19	18157413	18157482	(40460134)	+	MIR3	SINE/MIR	81	153	(55)	1838234
18	20.0	1.8	3.6	chr19	18194901	18194955	(40422661)	+	(CCGCC)n	Simple_repeat	1	56	(0)	1838337
12	20.4	2.4	2.4	chr19	18231969	18232009	(40385607)	+	G-rich	Low_complexity	1	42	(0)	1838423
1913	16.1	0.7	0.0	chr19	18232083	18232373	(40385243)	+	AluJb	SINE/Alu	1	293	(19)	1838424
20	7.2	0.0	0.0	chr19	18282216	18282245	(40335371)	+	(CCCT)n	Simple_repeat	1	30	(0)	1838530
311	26.9	6.3	2.5	chr19	18282357	18282478	(40335138)	C	MIR3	SINE/MIR	(52)	156	30	1838531
199	25.8	0.0	0.0	chr19	18292062	18292123	(40325493)	C	L2b	LINE/L2	(298)	3077	3016	1838554
370	24.7	1.1	0.0	chr19	18328556	18328648	(40288968)	+	MLT1K	LTR/ERVL-MaLR	171	264	(331)	1838633
364	27.8	6.5	0.9	chr19	18417204	18417319	(40200297)	+	L2c	LINE/L2	3260	3382	(5)	1838866
15	13.7	0.0	0.0	chr19	18429232	18429255	(40188361)	+	(G)n	Simple_repeat	1	24	(0)	1838880
723	21.7	12.6	6.1	chr19	18439406	18439848	(40177768)	+	MER39	LTR/ERV1	2	536	(171)	1838885
830	13.6	0.0	3.2	chr19	18494121	18494245	(40123371)	+	AluJr4	SINE/Alu	177	297	(15)	1838957
18	10.3	0.0	2.9	chr19	18494247	18494280	(40123336)	+	(GGGAA)n	Simple_repeat	1	34	(0)	1838958
15	9.1	4.2	0.0	chr19	18494285	18494308	(40123308)	+	(AG)n	Simple_repeat	1	25	(0)	1838959
2190	12.9	1.0	0.6	chr19	18494382	18494692	(40122924)	C	AluSx1	SINE/Alu	(0)	312	1	1838960
22	13.8	0.0	0.0	chr19	18505167	18505217	(40112399)	+	(CCTCT)n	Simple_repeat	1	51	(0)	1838975
752	30.7	14.2	1.6	chr19	18608688	18609322	(40008294)	+	L2b	LINE/L2	2441	3164	(211)	1839216
85	15.2	3.2	2.6	chr19	18647527	18647714	(39969902)	+	GA-rich	Low_complexity	1	194	(0)	1839313
32	3.0	0.0	0.0	chr19	18683656	18683689	(39933927)	+	(GAG)n	Simple_repeat	1	34	(0)	1839368
226	19.7	0.0	10.3	chr19	19032992	19033059	(39584557)	+	MIR1_Amn	SINE/MIR	90	150	(80)	1840111
13	18.2	0.0	0.0	chr19	19388787	19388817	(39228799)	+	A-rich	Low_complexity	1	31	(0)	1840897
30	0.0	0.0	0.0	chr19	19406452	19406479	(39211137)	+	(GCG)n	Simple_repeat	1	28	(0)	1840932
4476	16.4	8.1	1.2	chr19	28288542	28289399	(30328217)	C	MER49	LTR/ERV1	(0)	923	1	1848531
1479	18.8	0.7	3.5	chr19	28307348	28307629	(30309987)	+	AluJo	SINE/Alu	1	274	(38)	1848564
47	9.3	0.0	0.0	chr19	28307631	28307700	(30309916)	+	(GGGAA)n	Simple_repeat	1	70	(0)	1848565
2650	21.6	2.9	7.1	chr19	28358295	28359378	(30258238)	+	L1MB4	LINE/L1	4943	5982	(198)	1848633
947	14.4	11.7	0.0	chr19	28425600	28425780	(30191836)	C	Tigger1a_Art	DNA/TcMar-Tigger	(3)	494	290	1848750
674	26.9	15.1	0.0	chr19	28577736	28578044	(30039572)	+	MamGypLTR3a	LTR/Gypsy	37	400	(581)	1848996
293	32.5	6.2	5.4	chr19	28599818	28600041	(30017575)	C	MamRep564	Unknown	(106)	251	26	1849036
110	25.6	1.5	3.3	chr19	28988182	28988512	(29629104)	+	GA-rich	Low_complexity	1	336	(0)	1849557
918	23.2	0.5	0.9	chr19	28988516	28988732	(29628884)	+	L1MC4a	LINE/L1	7765	7980	(15)	1849552
17	26.9	3.8	2.4	chr19	29525860	29525938	(29091678)	+	G-rich	Low_complexity	1	82	(0)	1850365
19	13.3	4.8	0.0	chr19	29525962	29526003	(29091613)	+	(CCCCT)n	Simple_repeat	1	44	(0)	1850366
12	14.1	3.0	2.9	chr19	29526161	29526193	(29091423)	+	(AGCAGA)n	Simple_repeat	1	34	(0)	1850367
17	22.8	0.0	0.0	chr19	29663846	29663887	(28953729)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	1850600
207	31.8	7.4	0.0	chr19	29664117	29664204	(28953412)	C	L2a	LINE/L2	(3)	3423	3329	1850601
201	27.2	9.3	0.4	chr19	29664364	29664498	(28953118)	C	L2a	LINE/L2	(181)	3245	3097	1850601
350	27.9	6.9	1.6	chr19	29664629	29664752	(28952864)	+	L1MC5a	LINE/L1	2643	2773	(4)	1850602
339	33.3	0.0	0.9	chr19	29666741	29666852	(28950764)	+	MIRb	SINE/MIR	158	268	(0)	1850604
1811	11.3	0.0	0.4	chr19	29716868	29717115	(28900501)	+	AluSx	SINE/Alu	2	248	(64)	1850685
14	20.0	2.4	2.3	chr19	29811263	29811304	(28806312)	+	(TGAA)n	Simple_repeat	1	43	(0)	1850905
1136	26.7	10.6	4.4	chr19	29841553	29842010	(28775606)	C	MLT1K	LTR/ERVL-MaLR	(18)	577	88	1850970
613	12.9	2.5	11.6	chr19	29943135	29943278	(28674338)	C	FLAM_C	SINE/Alu	(26)	276	2	1851208
507	24.3	8.3	9.4	chr19	29993927	29994171	(28623445)	C	L1ME4b	LINE/L1	(314)	578	337	1851279
19	7.4	0.0	0.0	chr19	29994301	29994329	(28623287)	+	(CCTCC)n	Simple_repeat	1	29	(0)	1851280
3219	18.9	6.6	7.3	chr19	29994330	29994781	(28622835)	C	L1MB2	LINE/L1	(85)	6584	6107	1851281
5990	22.8	13.5	3.2	chr19	30028581	30030640	(28586976)	C	L1MB7	LINE/L1	(288)	2368	66	1851305
415	28.9	14.4	4.1	chr19	30052072	30052622	(28564994)	C	L2b	LINE/L2	(0)	3375	2671	1851326
26	3.2	0.0	2.9	chr19	30062226	30062259	(28555357)	+	(CTTC)n	Simple_repeat	1	34	(0)	1851344
13	14.7	4.8	4.5	chr19	30062260	30062307	(28555309)	+	(CTTCC)n	Simple_repeat	1	48	(0)	1851345
832	32.2	12.0	0.9	chr19	30085761	30086226	(28531390)	+	L1M5	LINE/L1	2700	3224	(2922)	1851367
971	30.7	6.0	1.0	chr19	30135338	30135845	(28481771)	+	L2a	LINE/L2	2887	3426	(0)	1851446
18	26.5	0.0	0.0	chr19	30223976	30224017	(28393599)	+	(CT)n	Simple_repeat	1	42	(0)	1851570
16	0.0	0.0	0.0	chr19	30224024	30224040	(28393576)	+	(T)n	Simple_repeat	1	17	(0)	1851571
12	11.5	10.0	2.3	chr19	30227662	30227701	(28389915)	+	(GCGA)n	Simple_repeat	1	44	(0)	1851577
19	4.0	0.0	0.0	chr19	30227737	30227762	(28389854)	+	(GCC)n	Simple_repeat	1	26	(0)	1851578
23	16.4	0.0	0.0	chr19	30228034	30228076	(28389540)	+	(GTGT)n	Simple_repeat	1	43	(0)	1851579
14	25.6	0.0	2.2	chr19	30249271	30249315	(28368301)	+	(TAGTAT)n	Simple_repeat	1	45	(0)	1851609
38	16.6	0.0	0.0	chr19	30249326	30249395	(28368221)	+	GA-rich	Low_complexity	1	70	(0)	1851610
284	35.9	3.3	2.5	chr19	30249435	30249554	(28368062)	C	MIRb	SINE/MIR	(57)	211	91	1851611
17	8.8	0.0	0.0	chr19	30267857	30267880	(28349736)	+	(TG)n	Simple_repeat	1	24	(0)	1851635
17	22.6	0.0	0.0	chr19	30267880	30267921	(28349695)	+	(GACAGA)n	Simple_repeat	1	42	(0)	1851636
20	19.4	3.6	1.7	chr19	30268031	30268086	(28349530)	+	(CTCC)n	Simple_repeat	1	58	(0)	1851637
37	25.1	6.0	1.9	chr19	30365233	30365381	(28252235)	+	(CT)n	Simple_repeat	1	158	(0)	1851751
15	21.0	0.0	0.0	chr19	30393127	30393161	(28224455)	+	(TCAT)n	Simple_repeat	1	35	(0)	1851796
632	26.4	11.8	4.5	chr19	30393375	30393851	(28223765)	C	L2b	LINE/L2	(0)	3375	2853	1851797
984	26.2	6.1	8.3	chr19	30415945	30416594	(28201022)	C	HAL1ME	LINE/L1	(1159)	1306	672	1851823
1244	15.1	2.6	2.6	chr19	30438090	30438320	(28179296)	C	L1PA17	LINE/L1	(2)	6164	5934	1851858
459	21.4	1.8	3.5	chr19	30438321	30438436	(28179180)	+	L1P4	LINE/L1	4984	5097	(1049)	1851859
152	24.9	2.9	2.8	chr19	30504199	30504690	(28112926)	+	(TTCC)n	Simple_repeat	1	506	(0)	1851965
23	24.4	1.1	6.2	chr19	30666354	30666448	(27951168)	+	(TCCC)n	Simple_repeat	1	96	(0)	1852165
13	18.2	0.0	0.0	chr19	30718212	30718242	(27899374)	+	G-rich	Low_complexity	1	31	(0)	1852231
224	31.0	0.8	14.1	chr19	31211264	31211398	(27406218)	C	L2c	LINE/L2	(4)	3383	3267	1852901
23	14.6	0.0	2.1	chr19	31263808	31263854	(27353762)	+	(AATA)n	Simple_repeat	1	47	(0)	1852975
272	26.7	4.0	3.1	chr19	31263909	31264025	(27353591)	+	MIR3	SINE/MIR	16	141	(89)	1852976
24	0.0	0.0	0.0	chr19	31340339	31340364	(27277252)	+	(A)n	Simple_repeat	1	26	(0)	1853067
18	16.1	4.9	4.7	chr19	31340495	31340555	(27277061)	+	G-rich	Low_complexity	1	64	(0)	1853068
39	18.5	1.0	4.0	chr19	31349425	31349523	(27268093)	+	GA-rich	Low_complexity	1	100	(0)	1853081
16	6.9	6.5	0.0	chr19	31351101	31351131	(27266485)	+	(CTTC)n	Simple_repeat	1	33	(0)	1853086
311	21.8	7.5	2.2	chr19	31351142	31351230	(27266386)	C	L1M2	LINE/L1	(2958)	3185	3092	1853087
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
76	31.8	1.7	4.3	chr19	32392102	32392447	(26225169)	+	G-rich	Low_complexity	1	352	(0)	1854706
548	26.1	7.3	2.1	chr19	32392517	32392690	(26224926)	+	MLT1J	LTR/ERVL-MaLR	3	197	(315)	1854707
13	21.4	3.9	3.7	chr19	32405916	32405967	(26211649)	+	(GGCG)n	Simple_repeat	1	54	(0)	1854737
806	27.3	9.2	2.1	chr19	32576569	32576950	(26040666)	+	HAL1ME	LINE/L1	1096	1507	(958)	1855078
19	23.4	7.4	1.1	chr19	32576951	32577031	(26040585)	+	(TTTCTC)n	Simple_repeat	1	87	(0)	1855079
50	5.6	0.0	0.0	chr19	32577043	32577098	(26040518)	+	(CT)n	Simple_repeat	1	56	(0)	1855080
1229	14.4	2.8	4.7	chr19	32577127	32577341	(26040275)	C	AluJr	SINE/Alu	(101)	211	1	1855081
420	22.5	6.2	0.8	chr19	32675569	32675689	(25941927)	+	MIR3	SINE/MIR	27	154	(54)	1855283
22	28.2	1.4	1.4	chr19	32746890	32746959	(25870657)	+	GA-rich	Low_complexity	1	71	(0)	1855423
22757	7.9	1.9	0.9	chr19	32781968	32788071	(25829545)	C	L1PA7	LINE/L1	(0)	6154	5	1855491
1251	26.3	15.7	1.3	chr19	32816188	32816719	(25800897)	C	L1ME3A	LINE/L1	(9)	6164	5542	1855546
120	21.7	4.3	1.7	chr19	32998670	32999014	(25618602)	+	GA-rich	Low_complexity	1	360	(0)	1855906
363	20.6	4.5	0.9	chr19	32999015	32999122	(25618494)	C	L2a	LINE/L2	(813)	2606	2495	1855902
1951	12.5	0.0	0.0	chr19	33161688	33161951	(25455665)	+	AluSz	SINE/Alu	6	269	(43)	1856325
458	25.5	11.7	1.8	chr19	33161952	33162083	(25455533)	C	LTR85a	LTR/Gypsy?	(427)	275	120	1856324
2290	8.5	0.0	4.4	chr19	33162196	33162512	(25455104)	C	AluY	SINE/Alu	(8)	303	1	1856326
1767	15.3	0.3	5.3	chr19	33239677	33239977	(25377639)	C	AluJr	SINE/Alu	(12)	300	15	1856461
17	9.3	0.0	7.5	chr19	33239978	33240007	(25377609)	+	(TCAAT)n	Simple_repeat	5	32	(0)	1856462
16	20.3	0.0	0.0	chr19	33278364	33278393	(25339223)	+	(T)n	Simple_repeat	1	30	(0)	1856526
15	7.5	0.0	6.2	chr19	33300281	33300312	(25317304)	+	(CAAAA)n	Simple_repeat	1	32	(0)	1856553
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
14	17.6	0.0	0.0	chr19	33302768	33302799	(25314817)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1856557
405	17.7	4.0	1.0	chr19	33788697	33788793	(24828823)	+	LTR81A	LTR/Gypsy	11	110	(1240)	1857317
34	19.1	3.9	6.0	chr19	33788799	33788926	(24828690)	+	GA-rich	Low_complexity	1	133	(0)	1857318
476	23.9	19.8	0.8	chr19	33789015	33789280	(24828336)	+	L1ME3Cz	LINE/L1	623	951	(46)	1857319
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
31	20.7	5.2	5.0	chr19	33796639	33796772	(24820844)	+	GA-rich	Low_complexity	1	141	(0)	1857332
2469	20.4	3.0	1.0	chr19	33831651	33832141	(24785475)	+	LTR53	LTR/ERVL	19	519	(0)	1857388
466	28.0	7.8	6.0	chr19	33832149	33832265	(24785351)	+	L1MD2	LINE/L1	70	201	(6432)	1857389
1794	20.3	9.6	4.4	chr19	33902655	33903008	(24714608)	C	MER44B	DNA/TcMar-Tigger	(0)	550	173	1857517
3260	18.6	0.6	7.2	chr19	33903009	33903357	(24714259)	C	LTR9D	LTR/ERV1	(0)	645	329	1857518
297	29.2	5.8	0.0	chr19	34036527	34036639	(24580977)	C	MamGypLTR1d	LTR/Gypsy	(0)	813	694	1857739
1886	15.4	2.0	0.3	chr19	34117839	34118130	(24499486)	+	AluJo	SINE/Alu	2	298	(14)	1857932
80	19.6	1.2	0.0	chr19	34118131	34118293	(24499323)	+	GA-rich	Low_complexity	1	165	(0)	1857933
2158	11.4	0.3	0.7	chr19	34499702	34499999	(24117617)	C	AluSq2	SINE/Alu	(15)	298	2	1858769
195	28.3	5.7	4.8	chr19	34964380	34964483	(23653133)	+	MIRb	SINE/MIR	90	194	(74)	1859400
992	25.9	12.2	3.9	chr19	34998637	34999371	(23618245)	C	L2b	LINE/L2	(115)	3260	2454	1859478
243	31.6	6.5	2.0	chr19	34999501	34999657	(23617959)	+	MIRb	SINE/MIR	8	168	(100)	1859479
1726	9.7	0.4	0.4	chr19	35029345	35029572	(23588044)	+	AluSx	SINE/Alu	85	312	(0)	1859550
489	29.4	9.2	2.7	chr19	35029573	35029907	(23587709)	C	L2a	LINE/L2	(158)	3268	2910	1859546
15	4.0	3.6	3.5	chr19	35030408	35030435	(23587181)	+	(CCCT)n	Simple_repeat	1	29	(0)	1859551
31	0.0	0.0	0.0	chr19	35030438	35030466	(23587150)	+	(GCC)n	Simple_repeat	1	29	(0)	1859552
565	28.5	22.1	1.4	chr19	35066708	35067121	(23550495)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	14	1859641
322	35.6	8.0	0.0	chr19	35090684	35090832	(23526784)	C	MIR	SINE/MIR	(0)	262	101	1859690
24	6.1	2.9	0.0	chr19	35123347	35123380	(23494236)	+	(GT)n	Simple_repeat	1	35	(0)	1859771
38	6.5	0.0	0.0	chr19	35135680	35135727	(23481889)	+	(ATG)n	Simple_repeat	1	48	(0)	1859792
338	31.5	4.0	5.8	chr19	35141669	35141878	(23475738)	C	L2b	LINE/L2	(10)	3377	3192	1859805
586	25.8	16.2	1.1	chr19	35142000	35142187	(23475429)	C	MIR	SINE/MIR	(0)	262	41	1859806
19	15.3	4.5	0.0	chr19	35142793	35142836	(23474780)	+	GA-rich	Low_complexity	1	46	(0)	1859807
19	21.8	1.6	3.2	chr19	35142957	35143018	(23474598)	+	(CGCCCC)n	Simple_repeat	1	63	(0)	1859808
31	22.3	4.8	4.9	chr19	35152594	35152735	(23464881)	+	GA-rich	Low_complexity	1	141	(0)	1859829
555	25.1	10.3	1.4	chr19	35205270	35205548	(23412068)	C	L2b	LINE/L2	(195)	3231	2931	1859932
574	24.5	17.3	0.0	chr19	35247509	35247821	(23369795)	C	L2a	LINE/L2	(241)	3185	2797	1860019
12	15.8	0.0	3.3	chr19	35270024	35270053	(23347563)	+	G-rich	Low_complexity	1	30	(0)	1860066
4169	17.5	1.9	3.0	chr19	35353044	35353199	(23264417)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(1)	1067	918	1860238
255	21.4	4.5	5.6	chr19	35509408	35509496	(23108120)	+	MER5A1	DNA/hAT-Charlie	41	128	(38)	1860570
15	3.5	6.5	3.0	chr19	35540660	35540690	(23076926)	+	(CTCTCC)n	Simple_repeat	1	33	(0)	1860630
335	23.8	9.8	1.0	chr19	35540712	35540813	(23076803)	+	MIR	SINE/MIR	137	248	(14)	1860631
20	15.0	3.3	9.7	chr19	35557852	35557941	(23059675)	+	G-rich	Low_complexity	1	93	(0)	1860653
115	25.7	3.8	1.9	chr19	35562774	35563184	(23054432)	+	(TCTC)n	Simple_repeat	1	418	(0)	1860656
470	27.2	13.7	2.1	chr19	35669894	35670347	(22947269)	C	L2a	LINE/L2	(0)	3375	2860	1860908
36	4.9	0.0	0.0	chr19	35670364	35670406	(22947210)	+	(CTCCC)n	Simple_repeat	1	43	(0)	1860909
14	4.9	0.0	0.0	chr19	35670407	35670427	(22947189)	+	(TCCT)n	Simple_repeat	1	21	(0)	1860910
338	19.9	1.8	0.0	chr19	35693876	35693979	(22923637)	+	LTR41	LTR/ERVL	90	194	(564)	1860987
104	17.0	0.4	6.7	chr19	35694035	35694303	(22923313)	+	(CCT)n	Simple_repeat	1	270	(0)	1860988
2148	10.7	0.7	2.3	chr19	35758661	35758970	(22858646)	C	AluSx1	SINE/Alu	(6)	306	2	1861079
16	20.3	2.1	2.1	chr19	35776284	35776330	(22841286)	+	(CTCCCT)n	Simple_repeat	1	48	(0)	1861127
13	32.3	0.0	3.1	chr19	35776331	35776348	(22841268)	+	(CTCCCC)n	Simple_repeat	1	65	(0)	1861128
248	33.1	13.1	0.6	chr19	35776361	35776533	(22841083)	C	L2b	LINE/L2	(0)	3375	3178	1861129
243	23.7	9.5	3.8	chr19	35820006	35820057	(22797559)	+	L2	LINE/L2	2339	2396	(1023)	1861233
62	0.0	0.0	0.0	chr19	35820058	35820110	(22797506)	+	(AC)n	Simple_repeat	1	53	(0)	1861234
243	23.7	9.5	3.8	chr19	35820111	35820136	(22797480)	+	L2	LINE/L2	2397	2422	(997)	1861233
368	26.9	4.4	0.0	chr19	35820143	35820272	(22797344)	+	MER20B	DNA/hAT-Charlie	7	142	(641)	1861235
180	29.3	10.9	0.0	chr19	35870370	35870451	(22747165)	+	OldhAT1	DNA/hAT-Ac	373	464	(2384)	1861340
47	0.0	2.2	0.0	chr19	35882166	35882211	(22735405)	+	(AAAT)n	Simple_repeat	1	47	(0)	1861357
298	22.9	4.5	0.0	chr19	35882213	35882302	(22735314)	+	MER91B	DNA/hAT-Tip100	44	202	(3322)	1861358
274	19.5	14.4	0.0	chr19	35882320	35882396	(22735220)	+	MER91B	DNA/hAT-Tip100	100	189	(1)	1861359
16	0.0	0.0	0.0	chr19	35900075	35900092	(22717524)	+	(C)n	Simple_repeat	1	18	(0)	1861404
246	24.4	6.8	0.0	chr19	35912145	35912226	(22705390)	+	L2	LINE/L2	2729	2816	(603)	1861431
906	21.1	0.0	3.8	chr19	35912234	35912310	(22705306)	+	AluJr	SINE/Alu	43	118	(194)	1861432
22	11.8	9.1	0.0	chr19	35936427	35936481	(22681135)	+	(CCCGGC)n	Simple_repeat	1	60	(0)	1861511
874	14.6	0.0	1.5	chr19	35986785	35986921	(22630695)	C	AluJo	SINE/Alu	(177)	135	1	1861618
15	14.3	2.4	4.7	chr19	35987017	35987058	(22630558)	+	(CCTTCC)n	Simple_repeat	1	43	(0)	1861619
11	24.8	0.0	2.5	chr19	35987143	35987182	(22630434)	+	(CTGTCT)n	Simple_repeat	1	40	(0)	1861620
963	29.7	7.1	3.9	chr19	36028608	36028996	(22588620)	+	L2a	LINE/L2	2788	3200	(226)	1861710
1553	19.9	0.4	1.8	chr19	36041799	36042070	(22575546)	+	AluJr	SINE/Alu	1	268	(44)	1861740
1434	17.8	4.2	7.8	chr19	36042071	36042349	(22575267)	+	L1MB2	LINE/L1	5484	5700	(605)	1861739
14	24.5	0.0	2.2	chr19	36115480	36115524	(22502092)	+	(GCGGCG)n	Simple_repeat	1	45	(0)	1861899
838	26.6	12.5	0.7	chr19	36128478	36128765	(22488851)	+	LTR10B	LTR/ERV1	179	505	(0)	1861928
639	21.9	9.1	1.2	chr19	36169400	36169561	(22448055)	C	LTR68	LTR/ERV1	(154)	586	411	1862016
2278	9.3	0.0	0.0	chr19	36170440	36170729	(22446887)	C	AluSx1	SINE/Alu	(22)	290	1	1862024
354	23.5	3.4	12.2	chr19	36170730	36170798	(22446818)	C	MLT1F	LTR/ERVL-MaLR	(57)	491	430	1862023
2448	24.4	9.0	5.6	chr19	37353173	37354218	(21263398)	C	L1ME3D	LINE/L1	(240)	2339	1240	1864283
59	3.3	0.0	0.0	chr19	37354223	37354284	(21263332)	+	(CCCCT)n	Simple_repeat	1	62	(0)	1864292
499	27.9	4.2	1.7	chr19	37354303	37354495	(21263121)	C	L1ME3D	LINE/L1	(5855)	281	20	1864283
2179	15.8	6.1	4.9	chr19	37780040	37780547	(20837069)	C	L1MA7	LINE/L1	(5)	6286	5812	1865094
534	28.8	4.5	1.4	chr19	37954256	37954470	(20663146)	C	Charlie2a	DNA/hAT-Charlie	(2401)	460	239	1865469
416	27.7	6.2	3.5	chr19	37954487	37954658	(20662958)	C	Charlie2a	DNA/hAT-Charlie	(2677)	184	8	1865469
281	30.0	12.8	2.6	chr19	38004086	38004239	(20613377)	C	MIR	SINE/MIR	(0)	262	91	1865599
702	27.4	7.4	9.5	chr19	38037053	38037495	(20580121)	C	L2b	LINE/L2	(19)	3356	2924	1865676
776	29.8	16.7	2.5	chr19	38043836	38044489	(20573127)	C	L2	LINE/L2	(527)	2892	2127	1865696
249	30.1	8.0	1.9	chr19	38044585	38044689	(20572927)	+	L2b	LINE/L2	3261	3372	(3)	1865697
12	12.6	0.0	3.6	chr19	38210686	38210713	(20406903)	+	(CCTTC)n	Simple_repeat	1	28	(0)	1866115
21	17.9	6.8	2.5	chr19	38226235	38226308	(20391308)	+	(CCCCTT)n	Simple_repeat	1	79	(0)	1866153
27	24.6	1.1	3.2	chr19	38226309	38226325	(20391291)	+	(CCCCCTC)n	Simple_repeat	2	93	(0)	1866154
296	29.3	10.7	3.6	chr19	38227607	38227744	(20389872)	C	MIR	SINE/MIR	(0)	262	114	1866158
2449	7.4	0.0	0.0	chr19	38235671	38235968	(20381648)	+	AluSc	SINE/Alu	1	298	(11)	1866177
43	4.3	0.0	0.0	chr19	38235969	38236017	(20381599)	+	(AAGGG)n	Simple_repeat	1	49	(0)	1866178
1039	23.1	0.4	0.0	chr19	38252598	38252822	(20364794)	+	MIR	SINE/MIR	23	248	(14)	1866230
182	26.3	0.0	0.0	chr19	38252791	38252828	(20364788)	+	L2c	LINE/L2	3375	3412	(14)	1866228
17	18.3	0.0	0.0	chr19	38253419	38253455	(20364161)	+	G-rich	Low_complexity	1	37	(0)	1866231
423	33.8	3.1	1.4	chr19	38263679	38263900	(20353716)	+	L2b	LINE/L2	3069	3294	(81)	1866263
260	27.1	5.5	3.4	chr19	38263911	38263998	(20353618)	+	L2b	LINE/L2	3128	3217	(158)	1866264
195	21.9	15.1	0.0	chr19	38264104	38264176	(20353440)	+	L2b	LINE/L2	3276	3361	(14)	1866264
982	26.2	9.4	5.1	chr19	38265775	38266261	(20351355)	C	L2a	LINE/L2	(0)	3426	2917	1866265
829	6.8	0.0	1.0	chr19	38266291	38266393	(20351223)	+	AluSq	SINE/Alu	198	299	(14)	1866266
200	21.1	13.6	0.0	chr19	38267287	38267343	(20350273)	C	L2a	LINE/L2	(1883)	1536	1471	1866265
1399	26.2	19.7	0.1	chr19	38267372	38268154	(20349462)	C	L2a	LINE/L2	(2200)	1219	246	1866265
3431	29.0	8.9	6.4	chr19	38295714	38296320	(20321296)	+	HERVL40-int	LTR/ERVL	4154	4781	(749)	1866324
967	18.1	3.4	7.0	chr19	38316237	38316451	(20301165)	+	AluJo	SINE/Alu	14	220	(92)	1866379
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
645	24.4	2.9	10.1	chr19	38360882	38361178	(20256438)	C	L2b	LINE/L2	(89)	3286	3012	1866499
15	26.1	1.4	4.3	chr19	38388628	38388716	(20228900)	+	(CCCCTCC)n	Simple_repeat	1	86	(0)	1866554
12	20.6	3.8	8.5	chr19	38388723	38388801	(20228815)	+	(GCCGGA)n	Simple_repeat	1	82	(0)	1866555
618	20.6	1.8	12.5	chr19	38411531	38411714	(20205902)	+	AluSc5	SINE/Alu	138	301	(8)	1866596
2171	12.7	0.0	0.0	chr19	38415777	38416076	(20201540)	+	AluSx	SINE/Alu	1	300	(12)	1866606
1706	14.7	0.3	10.6	chr19	38416077	38416182	(20201434)	C	AluJr	SINE/Alu	(106)	206	123	1866604
2418	8.8	0.3	0.3	chr19	38416183	38416490	(20201126)	+	AluSx	SINE/Alu	2	309	(3)	1866607
14	10.2	0.0	8.1	chr19	38434673	38434709	(20182907)	+	G-rich	Low_complexity	1	37	(0)	1866653
1002	29.2	3.4	9.0	chr19	38450065	38450390	(20167226)	C	L2b	LINE/L2	(565)	2854	2524	1866685
3263	13.7	17.9	4.5	chr19	38450391	38451016	(20166600)	C	LTR9A1	LTR/ERV1	(0)	728	1	1866687
12	21.2	1.8	7.0	chr19	38515131	38515186	(20102430)	+	G-rich	Low_complexity	1	57	(0)	1866831
18	12.6	4.4	2.1	chr19	38546115	38546159	(20071457)	+	(GTCTCT)n	Simple_repeat	1	47	(0)	1866905
960	11.9	8.6	1.3	chr19	38733104	38733254	(19884362)	C	AluJb	SINE/Alu	(13)	299	137	1867317
355	26.8	12.4	0.0	chr19	38733260	38733386	(19884230)	C	MIRb	SINE/MIR	(118)	150	6	1867318
435	28.6	9.7	6.0	chr19	38734899	38735284	(19882332)	C	L2b	LINE/L2	(18)	3357	2956	1867321
22257	4.4	1.1	0.2	chr19	38823306	38827018	(19790598)	+	HERV9NC-int	LTR/ERV1	1	3917	(2201)	1867532
385	31.5	2.3	0.8	chr19	38827195	38827322	(19790294)	+	L2b	LINE/L2	3231	3360	(15)	1867533
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
466	24.0	4.6	4.0	chr19	38868758	38868909	(19748707)	+	L2a	LINE/L2	3028	3180	(246)	1867626
1132	11.9	0.6	4.5	chr19	38868911	38869086	(19748530)	C	AluJo	SINE/Alu	(129)	183	15	1867627
18	3.8	0.0	3.5	chr19	38878057	38878090	(19739526)	+	(GGAGG)n	Simple_repeat	1	32	(0)	1867652
365	38.0	1.2	2.4	chr19	38974561	38974730	(19642886)	+	HAL1ME	LINE/L1	2171	2338	(127)	1867891
189	18.8	0.0	0.0	chr19	38976578	38976609	(19641007)	C	MIRb	SINE/MIR	(43)	225	194	1867894
1133	13.8	0.0	2.2	chr19	39058320	39058497	(19559119)	C	AluSx	SINE/Alu	(22)	290	117	1868126
306	11.6	0.0	0.0	chr19	39100027	39100069	(19517547)	+	Alu	SINE/Alu	1	43	(90)	1868246
553	17.6	0.0	1.1	chr19	39100070	39100160	(19517456)	C	AluJb	SINE/Alu	(221)	91	2	1868247
657	30.4	9.5	5.7	chr19	39128684	39128829	(19488787)	C	L1ME3C	LINE/L1	(23)	6100	5936	1868340
522	26.0	5.1	6.1	chr19	39128830	39129009	(19488607)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	1868341
218	34.9	1.5	0.0	chr19	39139168	39139233	(19478383)	+	L2c	LINE/L2	3099	3165	(222)	1868364
294	36.1	5.5	0.6	chr19	39139714	39139869	(19477747)	C	MER5B	DNA/hAT-Charlie	(6)	172	9	1868365
576	27.7	6.0	1.6	chr19	39183206	39183590	(19434026)	+	L1M5	LINE/L1	5288	5793	(401)	1868461
261	26.9	0.0	3.7	chr19	39183852	39183932	(19433684)	C	MER5B	DNA/hAT-Charlie	(94)	84	7	1868470
1975	13.2	0.0	3.6	chr19	39187197	39187310	(19430306)	C	AluJb	SINE/Alu	(177)	135	22	1868478
12	21.0	5.9	1.9	chr19	39187316	39187366	(19430250)	+	(TCTCTG)n	Simple_repeat	1	54	(0)	1868480
361	28.3	2.0	9.2	chr19	39305594	39305822	(19311794)	+	MIR	SINE/MIR	22	244	(24)	1868803
44	12.4	2.4	1.2	chr19	39326687	39326769	(19290847)	+	G-rich	Low_complexity	1	85	(0)	1868854
560	28.1	3.3	2.7	chr19	39326839	39327021	(19290595)	+	MIR	SINE/MIR	77	260	(2)	1868855
248	36.5	14.1	1.6	chr19	39340884	39341633	(19275983)	+	L2	LINE/L2	2092	2950	(469)	1868894
876	17.1	8.1	1.7	chr19	39344980	39345152	(19272464)	+	MER5A	DNA/hAT-Charlie	1	185	(4)	1868898
619	12.7	1.0	2.1	chr19	39403058	39403506	(19214110)	C	MSR1	Satellite	(0)	444	1	1869004
29	2.9	2.9	0.0	chr19	39406768	39406802	(19210814)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1869012
17	27.4	2.2	5.3	chr19	39409702	39409793	(19207823)	+	G-rich	Low_complexity	1	94	(0)	1869013
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
13	18.1	5.6	6.7	chr19	39413694	39413764	(19203852)	+	(CCTCCGC)n	Simple_repeat	1	75	(0)	1869016
623	35.5	6.3	3.6	chr19	39414263	39414873	(19202743)	C	L2b	LINE/L2	(74)	3301	2658	1869017
210	22.0	7.4	0.0	chr19	39440137	39440186	(19177430)	+	L2a	LINE/L2	3340	3393	(33)	1869070
359	29.1	0.2	0.0	chr19	39440205	39440306	(19177310)	C	MIR	SINE/MIR	(5)	263	157	1869071
336	19.1	6.5	6.7	chr19	39440307	39440456	(19177160)	+	MER91B	DNA/hAT-Tip100	2	208	(3316)	1869072
233	29.3	0.0	1.3	chr19	39448448	39448523	(19169093)	+	MamSINE1	SINE/tRNA-RTE	23	97	(193)	1869095
49	0.0	0.0	0.0	chr19	39458232	39458275	(19159341)	+	(CCA)n	Simple_repeat	1	44	(0)	1869124
7602	5.9	1.9	3.1	chr19	39479462	39480441	(19137175)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1869167
1070	23.4	3.8	14.0	chr19	39518301	39518538	(19099078)	C	L2a	LINE/L2	(420)	2999	2789	1869256
12	20.1	0.0	2.8	chr19	39520080	39520115	(19097501)	+	(TTATTG)n	Simple_repeat	1	36	(0)	1869263
2319	10.5	1.6	0.0	chr19	40161117	40161422	(18456194)	+	AluSx1	SINE/Alu	1	311	(1)	1870356
44	4.7	4.5	0.0	chr19	40161432	40161498	(18456118)	+	(AAGGGA)n	Simple_repeat	1	70	(0)	1870357
453	33.0	4.9	0.9	chr19	40219783	40219999	(18397617)	+	MIR	SINE/MIR	36	261	(1)	1870521
216	20.0	2.0	0.0	chr19	40220031	40220080	(18397536)	+	L2a	LINE/L2	3376	3426	(0)	1870522
757	30.4	7.0	3.2	chr19	40274370	40274899	(18342717)	C	L2a	LINE/L2	(0)	3426	2828	1870628
344	27.3	3.1	5.5	chr19	40277220	40277382	(18340234)	C	Charlie29a	DNA/hAT-Charlie	(556)	163	5	1870636
247	28.1	4.2	8.2	chr19	40277522	40277668	(18339948)	+	L2a	LINE/L2	2919	3059	(360)	1870637
184	29.2	0.0	0.0	chr19	40277822	40277869	(18339747)	+	L2a	LINE/L2	3365	3412	(14)	1870637
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
13	9.8	9.1	0.0	chr19	40444351	40444383	(18173233)	+	(AGCCGCG)n	Simple_repeat	1	36	(0)	1871078
12	17.0	2.9	2.8	chr19	40446172	40446206	(18171410)	+	(TAGG)n	Simple_repeat	1	36	(0)	1871083
133	18.7	6.4	0.0	chr19	40494439	40494783	(18122833)	+	(CTAT)n	Simple_repeat	1	367	(0)	1871232
872	27.7	8.3	4.8	chr19	40523132	40523330	(18094286)	C	L2a	LINE/L2	(215)	3211	3011	1871310
38	0.0	0.0	0.0	chr19	40531465	40531499	(18086117)	+	(T)n	Simple_repeat	1	35	(0)	1871329
14	20.4	3.7	3.6	chr19	40531502	40531555	(18086061)	+	G-rich	Low_complexity	1	56	(0)	1871330
226	28.8	3.7	0.9	chr19	40541260	40541364	(18076252)	C	MIRc	SINE/MIR	(118)	150	43	1871362
243	32.7	3.2	1.7	chr19	40598566	40598696	(18018920)	C	MIR3	SINE/MIR	(136)	132	2	1871499
12	11.0	2.9	5.7	chr19	40602488	40602521	(18015095)	+	(GCCCA)n	Simple_repeat	1	35	(0)	1871503
13	32.6	0.0	0.0	chr19	40602563	40602607	(18015009)	+	(CTCC)n	Simple_repeat	1	45	(0)	1871504
42	0.0	0.0	0.0	chr19	40634800	40634837	(17982779)	+	(CAT)n	Simple_repeat	1	38	(0)	1871567
402	27.6	8.7	2.9	chr19	40663937	40664141	(17953475)	C	L2b	LINE/L2	(23)	3352	3135	1871652
1857	14.7	0.0	1.1	chr19	40664230	40664515	(17953101)	+	AluJr	SINE/Alu	20	302	(10)	1871653
16	25.4	6.6	1.2	chr19	40717230	40717305	(17900311)	+	(GGC)n	Simple_repeat	1	81	(0)	1871779
228	24.6	10.3	0.0	chr19	40777174	40777234	(17840382)	+	MIR	SINE/MIR	77	144	(118)	1871937
17	20.8	3.0	4.4	chr19	40799446	40799511	(17818105)	+	G-rich	Low_complexity	1	68	(0)	1871993
20	15.6	3.9	1.9	chr19	40806679	40806730	(17810886)	+	G-rich	Low_complexity	1	54	(0)	1872002
7224	10.4	1.8	0.2	chr19	40822624	40823609	(17794007)	+	LTR5B	LTR/ERVK	1	1002	(0)	1872027
2192	11.4	0.7	0.7	chr19	40832260	40832557	(17785059)	+	AluSx1	SINE/Alu	2	299	(13)	1872046
328	19.4	5.6	5.6	chr19	40920779	40920849	(17696767)	C	MER33	DNA/hAT-Charlie	(253)	71	1	1872236
456	25.0	9.1	1.6	chr19	40920860	40920981	(17696635)	+	MIR	SINE/MIR	81	212	(50)	1872237
407	28.6	5.7	0.8	chr19	40932974	40933107	(17684509)	C	Charlie4z	DNA/hAT-Charlie	(8)	159	19	1872259
395	24.6	12.9	6.2	chr19	40933309	40933438	(17684178)	+	MIRb	SINE/MIR	121	260	(8)	1872260
651	25.9	3.2	8.8	chr19	41189553	41189814	(17427802)	C	L2	LINE/L2	(610)	2809	2563	1872832
17	11.3	3.5	0.0	chr19	41204391	41204419	(17413197)	+	(TC)n	Simple_repeat	1	30	(0)	1872871
2446	10.0	0.0	0.0	chr19	41204587	41204895	(17412721)	C	AluSg	SINE/Alu	(1)	309	1	1872872
27	0.0	0.0	3.3	chr19	41325557	41325586	(17292030)	+	(CTCC)n	Simple_repeat	1	30	(0)	1873155
14	20.8	1.6	7.7	chr19	41350889	41350952	(17266664)	+	G-rich	Low_complexity	1	65	(0)	1873222
18	20.0	3.8	1.8	chr19	41353639	41353691	(17263925)	+	(TCC)n	Simple_repeat	1	55	(0)	1873224
13	8.5	4.0	0.0	chr19	41427388	41427412	(17190204)	+	(GCCCA)n	Simple_repeat	1	26	(0)	1873409
17	21.5	1.5	6.0	chr19	41427414	41427479	(17190137)	+	G-rich	Low_complexity	1	67	(0)	1873410
26	27.7	5.2	1.6	chr19	41427886	41428001	(17189615)	+	GA-rich	Low_complexity	1	122	(0)	1873413
2014	9.7	4.0	1.0	chr19	41449167	41449455	(17168161)	C	AluSz6	SINE/Alu	(14)	298	1	1873462
11	21.5	6.0	1.9	chr19	41928335	41928384	(16689232)	+	(GAGAGCT)n	Simple_repeat	1	53	(0)	1874188
13	23.8	3.9	1.9	chr19	41928395	41928445	(16689171)	+	(GCGG)n	Simple_repeat	1	53	(0)	1874189
35	9.8	0.0	0.0	chr19	41928464	41928518	(16689098)	+	(CTC)n	Simple_repeat	1	55	(0)	1874190
12	19.7	0.0	5.1	chr19	41928531	41928569	(16689047)	+	(GCCC)n	Simple_repeat	1	39	(0)	1874191
19	14.3	2.6	0.0	chr19	41928590	41928628	(16688988)	+	(GGC)n	Simple_repeat	1	40	(0)	1874192
14	18.6	2.7	0.0	chr19	41928741	41928777	(16688839)	+	G-rich	Low_complexity	1	38	(0)	1874193
14	19.1	0.0	2.6	chr19	41928785	41928822	(16688794)	+	(CCCCT)n	Simple_repeat	1	38	(0)	1874194
198	28.5	4.1	5.4	chr19	41932278	41932438	(16685178)	+	L2c	LINE/L2	3183	3340	(35)	1874203
33	15.2	3.1	5.9	chr19	41932445	41932542	(16685074)	+	G-rich	Low_complexity	1	101	(0)	1874204
44	13.3	1.2	2.3	chr19	41952106	41952191	(16665425)	+	(CCCTC)n	Simple_repeat	1	87	(0)	1874236
13	16.0	5.7	0.0	chr19	41957982	41958016	(16659600)	+	GA-rich	Low_complexity	1	37	(0)	1874252
839	17.6	22.1	1.6	chr19	42028318	42028752	(16588864)	+	LTR50	LTR/ERVL	19	655	(140)	1874407
227	31.6	4.8	3.0	chr19	42034874	42034974	(16582642)	+	L2b	LINE/L2	3271	3373	(2)	1874421
2258	8.6	2.7	0.7	chr19	42034989	42035280	(16582336)	C	AluSp	SINE/Alu	(15)	298	1	1874427
13	4.5	0.0	7.4	chr19	42075887	42075913	(16541703)	+	(GGA)n	Simple_repeat	1	27	(0)	1874519
12	28.8	3.1	3.0	chr19	42086775	42086838	(16530778)	+	G-rich	Low_complexity	1	66	(0)	1874537
855	26.9	2.0	2.0	chr19	42092650	42092899	(16524717)	+	MIR	SINE/MIR	13	262	(0)	1874548
17	15.6	2.1	4.2	chr19	42133305	42133351	(16484265)	+	(CCCCT)n	Simple_repeat	1	48	(0)	1874651
30	24.1	7.5	0.7	chr19	42149604	42149736	(16467880)	+	(AGAGAC)n	Simple_repeat	1	143	(0)	1874688
289	28.1	18.1	1.7	chr19	42157545	42157909	(16459707)	C	L2c	LINE/L2	(0)	3426	2937	1874698
28	3.3	0.0	0.0	chr19	42177252	42177282	(16440334)	+	(CCCGCT)n	Simple_repeat	1	31	(0)	1874740
18	19.6	0.0	8.6	chr19	42179491	42179560	(16438056)	+	G-rich	Low_complexity	1	70	(0)	1874744
14	4.5	4.3	0.0	chr19	42246217	42246239	(16371377)	+	(CCA)n	Simple_repeat	1	24	(0)	1874878
12	28.5	4.6	1.5	chr19	42280618	42280682	(16336934)	+	(GCCG)n	Simple_repeat	1	68	(0)	1874952
13	15.4	0.0	3.2	chr19	42284093	42284123	(16333493)	+	(GCAC)n	Simple_repeat	1	31	(0)	1874957
17	23.3	0.0	0.0	chr19	42284254	42284298	(16333318)	+	GA-rich	Low_complexity	1	45	(0)	1874958
20	12.0	6.9	3.2	chr19	42284301	42284358	(16333258)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1874959
12	12.8	5.6	2.6	chr19	42325733	42325768	(16291848)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1875034
287	33.5	4.3	4.3	chr19	42326487	42326648	(16290968)	C	L2b	LINE/L2	(0)	3375	3214	1875036
579	29.4	4.5	7.1	chr19	42326679	42326739	(16290877)	+	MIR	SINE/MIR	17	74	(188)	1875037
1521	15.5	13.9	1.9	chr19	42326740	42327003	(16290613)	C	AluJb	SINE/Alu	(10)	302	2	1875038
262	28.6	0.0	0.0	chr19	42413786	42413855	(16203761)	+	L2b	LINE/L2	3305	3374	(1)	1875231
2102	14.7	1.0	0.0	chr19	42413997	42414302	(16203314)	+	AluSc	SINE/Alu	1	309	(0)	1875232
6451	20.2	2.2	1.9	chr19	42791493	42793683	(15823933)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	747	1875789
1328	26.0	1.3	1.6	chr19	42793712	42794024	(15823592)	C	HUERS-P3b-int	LTR/ERV1	(8348)	571	260	1875789
6389	20.7	2.1	1.6	chr19	43102282	43104470	(15513146)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	747	1876233
1418	24.4	1.6	1.6	chr19	43104491	43104802	(15512814)	C	HUERS-P3b-int	LTR/ERV1	(8348)	571	260	1876233
253	34.7	2.4	0.8	chr19	43201890	43202011	(15415605)	+	LTR101_Mam	LTR/ERVL	600	723	(106)	1876379
6538	19.7	2.2	1.8	chr19	43227347	43229535	(15388081)	C	HUERS-P3b-int	LTR/ERV1	(5635)	3284	746	1876408
1473	23.4	1.3	1.6	chr19	43229563	43229871	(15387745)	C	HUERS-P3b-int	LTR/ERV1	(8348)	571	264	1876408
5231	20.2	4.4	1.9	chr19	43284915	43286078	(15331538)	C	L1MCa	LINE/L1	(5314)	1194	1	1876470
546	11.5	9.4	0.0	chr19	43498689	43498775	(15118841)	+	AluJb	SINE/Alu	210	305	(7)	1876941
183	33.3	8.7	1.8	chr19	43498799	43498969	(15118647)	C	L2c	LINE/L2	(294)	3093	2910	1876942
790	7.4	0.0	1.5	chr19	43506982	43507941	(15109675)	+	MSR1	Satellite	1	945	(0)	1876963
14	24.2	2.3	0.0	chr19	43533433	43533476	(15084140)	+	(GGCAGC)n	Simple_repeat	1	45	(0)	1877038
22	3.6	0.0	0.0	chr19	43607709	43607737	(15009879)	+	(CCT)n	Simple_repeat	1	29	(0)	1877222
568	26.6	8.2	0.6	chr19	43643454	43643623	(14973993)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	408	1877305
494	17.1	1.9	4.5	chr19	43643669	43643778	(14973838)	+	MLT1C	LTR/ERVL-MaLR	1	107	(360)	1877306
766	29.6	9.3	6.9	chr19	43701271	43701659	(14915957)	C	L2a	LINE/L2	(3)	3423	3025	1877470
1013	15.8	0.0	6.6	chr19	43701680	43701862	(14915754)	+	AluJr	SINE/Alu	1	171	(141)	1877471
733	25.8	1.6	1.6	chr19	43748109	43748301	(14869315)	C	MIR	SINE/MIR	(30)	232	40	1877583
403	32.7	7.6	3.5	chr19	43756850	43756931	(14860685)	C	MIRb	SINE/MIR	(30)	238	144	1877598
273	26.7	0.9	7.4	chr19	43764931	43765068	(14852548)	C	L2b	LINE/L2	(222)	3165	3038	1877616
13	18.9	2.8	0.0	chr19	43766656	43766691	(14850925)	+	(GCCCCA)n	Simple_repeat	1	37	(0)	1877624
12	19.4	0.0	5.1	chr19	43781033	43781071	(14836545)	+	(GGCAG)n	Simple_repeat	1	39	(0)	1877659
467	24.5	1.9	0.9	chr19	43785559	43785665	(14831951)	C	L2a	LINE/L2	(27)	3399	3292	1877666
2132	9.4	0.7	0.0	chr19	43799265	43799541	(14818075)	C	AluSx3	SINE/Alu	(32)	279	1	1877712
16	31.8	2.0	4.0	chr19	43799556	43799653	(14817963)	+	(TCTTCC)n	Simple_repeat	1	100	(0)	1877713
402	24.8	7.5	8.6	chr19	43934794	43934956	(14682660)	C	MIR	SINE/MIR	(40)	222	62	1877949
725	28.9	6.9	2.4	chr19	44140935	44141225	(14476391)	+	L2	LINE/L2	468	772	(2647)	1878265
355	25.6	8.8	0.6	chr19	44165401	44165557	(14452059)	+	MIR	SINE/MIR	61	231	(31)	1878310
1701	12.1	0.8	0.4	chr19	44644709	44644947	(13972669)	C	AluSx3	SINE/Alu	(3)	308	69	1879204
645	32.8	9.1	1.8	chr19	44689526	44690175	(13927441)	+	L2b	LINE/L2	2623	3329	(46)	1879340
55	26.3	2.3	4.5	chr19	44718868	44719085	(13898531)	+	GA-rich	Low_complexity	1	223	(0)	1879425
1006	23.0	9.5	4.1	chr19	44727678	44728226	(13889390)	+	L2a	LINE/L2	2814	3387	(0)	1879452
256	25.0	5.0	0.0	chr19	44728237	44728312	(13889304)	C	L1ME4b	LINE/L1	(10)	882	803	1879455
2000	15.4	0.0	0.0	chr19	44728362	44728654	(13888962)	C	AluJb	SINE/Alu	(8)	304	12	1879456
12	12.0	0.0	6.5	chr19	44745521	44745551	(13872065)	+	(CTCC)n	Simple_repeat	1	31	(0)	1879515
17	9.7	0.0	5.4	chr19	44747546	44747582	(13870034)	+	G-rich	Low_complexity	1	37	(0)	1879518
14	0.0	4.8	0.0	chr19	44747592	44747612	(13870004)	+	(CCTC)n	Simple_repeat	1	22	(0)	1879519
357	26.2	8.3	0.0	chr19	44748055	44748176	(13869440)	C	MIRb	SINE/MIR	(101)	167	35	1879521
18	31.9	0.0	0.0	chr19	44748429	44748491	(13869125)	+	(CCCCC)n	Simple_repeat	1	63	(0)	1879522
11	25.1	2.2	2.2	chr19	44753586	44753630	(13863986)	+	(ACCGGC)n	Simple_repeat	1	46	(0)	1879532
1912	10.8	1.4	1.1	chr19	44770899	44771178	(13846438)	C	L1PA16	LINE/L1	(0)	6166	5886	1879576
20	8.7	8.1	0.0	chr19	44818998	44819034	(13798582)	+	(CT)n	Simple_repeat	1	40	(0)	1879708
14	26.0	1.9	1.9	chr19	44844984	44845035	(13772581)	+	G-rich	Low_complexity	1	53	(0)	1879785
56	25.0	4.0	1.1	chr19	44848657	44848829	(13768787)	+	(CT)n	Simple_repeat	1	180	(0)	1879792
626	28.5	8.3	1.0	chr19	44904654	44904855	(13712761)	C	MIR	SINE/MIR	(29)	233	16	1879932
204	29.9	16.1	1.9	chr19	44904885	44905045	(13712571)	C	MIRb	SINE/MIR	(79)	189	5	1879933
11	15.5	0.0	9.3	chr19	44906273	44906315	(13711301)	+	(AGAATG)n	Simple_repeat	1	43	(0)	1879936
243	36.2	5.8	1.2	chr19	44911407	44911571	(13706045)	+	MIRc	SINE/MIR	1	173	(95)	1879947
2432	9.7	0.0	0.0	chr19	45002341	45002651	(13614965)	C	AluSx1	SINE/Alu	(0)	312	2	1880194
729	10.8	2.9	0.0	chr19	45047460	45047561	(13570055)	+	U6	snRNA	3	107	(0)	1880336
787	18.7	11.1	0.5	chr19	45047584	45047793	(13569823)	+	L1MB2	LINE/L1	5936	6170	(1)	1880337
2375	9.6	0.3	0.0	chr19	45116912	45117212	(13500404)	C	AluSq	SINE/Alu	(11)	302	1	1880504
285	32.9	5.3	11.2	chr19	45117213	45117398	(13500218)	C	L2c	LINE/L2	(246)	3141	2949	1880503
645	22.9	0.7	0.0	chr19	45170596	45170735	(13446881)	+	MIR	SINE/MIR	40	180	(82)	1880598
18	18.2	6.9	1.6	chr19	45170860	45170917	(13446699)	+	GA-rich	Low_complexity	1	62	(0)	1880599
2584	7.1	0.0	0.0	chr19	45184619	45184929	(13432687)	+	AluYk4	SINE/Alu	1	311	(0)	1880637
371	31.2	6.2	6.4	chr19	45184930	45185153	(13432463)	C	L2c	LINE/L2	(1574)	1845	1632	1880631
23	7.5	4.4	2.1	chr19	45473060	45473104	(13144512)	+	(GGAGGA)n	Simple_repeat	1	47	(0)	1881408
12	9.1	4.2	0.0	chr19	45526464	45526487	(13091129)	+	(AGGA)n	Simple_repeat	1	25	(0)	1881542
374	23.5	10.7	6.7	chr19	45600585	45600764	(13016852)	+	MIR3	SINE/MIR	10	185	(23)	1881741
188	25.6	8.2	8.2	chr19	45607349	45607433	(13010183)	C	AmnSINE1	SINE/5S-Deu-L2	(425)	150	66	1881761
13	3.5	9.7	2.9	chr19	45607530	45607560	(13010056)	+	GA-rich	Low_complexity	1	34	(0)	1881762
401	29.6	0.8	0.0	chr19	45632504	45632628	(12984988)	C	Charlie10	DNA/hAT-Charlie	(2664)	158	33	1881847
944	11.9	0.0	0.0	chr19	45663855	45663980	(12953636)	C	FLAM_C	SINE/Alu	(16)	127	2	1881941
14	9.1	0.0	0.0	chr19	45768866	45768889	(12848727)	+	(CCTC)n	Simple_repeat	1	24	(0)	1882220
70	0.0	0.0	0.0	chr19	45770205	45770266	(12847350)	+	(CAG)n	Simple_repeat	1	62	(0)	1882221
12	16.3	7.0	2.2	chr19	45770291	45770333	(12847283)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	1882222
12	9.7	0.0	0.0	chr19	45864341	45864362	(12753254)	+	(CGGG)n	Simple_repeat	1	22	(0)	1882444
13	27.4	1.9	1.8	chr19	45902621	45902674	(12714942)	+	(TCCCCCC)n	Simple_repeat	1	55	(0)	1882531
13	25.4	3.6	5.8	chr19	45902752	45902834	(12714782)	+	(CAGCG)n	Simple_repeat	1	86	(0)	1882532
17	13.0	7.1	0.0	chr19	45933638	45933679	(12683937)	+	GA-rich	Low_complexity	1	45	(0)	1882617
532	30.8	5.6	0.0	chr19	45994834	45995018	(12622598)	+	MIRb	SINE/MIR	58	253	(15)	1882788
1939	24.9	11.6	9.5	chr19	46132077	46133206	(12484410)	C	HERV35I-int	LTR/ERV1	(5736)	1182	26	1882995
258	14.8	3.3	20.7	chr19	46262989	46263050	(12354566)	C	LTR24B	LTR/ERV1	(448)	128	70	1883225
14	10.4	6.5	0.0	chr19	46263173	46263203	(12354413)	+	GA-rich	Low_complexity	1	33	(0)	1883227
445	23.5	0.0	1.0	chr19	46402441	46402539	(12215077)	+	MLT1H	LTR/ERVL-MaLR	57	154	(395)	1883568
1100	13.1	0.0	1.9	chr19	46410881	46411040	(12206576)	+	AluJo	SINE/Alu	142	298	(14)	1883594
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
15	18.6	2.1	4.2	chr19	46416659	46416705	(12200911)	+	(GGCGGA)n	Simple_repeat	1	48	(0)	1883605
18	18.5	0.0	2.2	chr19	46488248	46488292	(12129324)	+	G-rich	Low_complexity	1	45	(0)	1883807
263	21.0	3.2	0.0	chr19	46488423	46488482	(12129134)	+	MIRc	SINE/MIR	100	166	(102)	1883808
2277	9.5	0.0	1.6	chr19	46515631	46515934	(12101682)	+	AluSx3	SINE/Alu	1	299	(12)	1883885
185	37.7	2.6	2.6	chr19	46516222	46516338	(12101278)	C	MIR3	SINE/MIR	(74)	134	18	1883886
12	25.9	2.4	0.0	chr19	46604438	46604479	(12013137)	+	(TTCCCTC)n	Simple_repeat	1	43	(0)	1884096
16	16.6	0.0	0.0	chr19	46604548	46604574	(12013042)	+	(T)n	Simple_repeat	1	27	(0)	1884097
15	37.4	0.0	2.2	chr19	46659873	46659964	(11957652)	+	A-rich	Low_complexity	1	92	(0)	1884227
14	17.2	5.1	0.0	chr19	46725081	46725119	(11892497)	+	(TCCCC)n	Simple_repeat	1	41	(0)	1884389
1760	16.7	3.6	1.4	chr19	46783512	46783805	(11833811)	+	AluJb	SINE/Alu	1	301	(11)	1884534
571	18.2	7.2	4.1	chr19	46851218	46851338	(11766278)	C	AluJr4	SINE/Alu	(179)	133	9	1884739
18	0.0	0.0	0.0	chr19	46976211	46976230	(11641386)	+	(T)n	Simple_repeat	1	20	(0)	1885010
2280	9.0	0.3	0.0	chr19	47034902	47035191	(11582425)	+	AluSp	SINE/Alu	3	293	(20)	1885119
32	0.0	0.0	0.0	chr19	47035192	47035221	(11582395)	+	(AAG)n	Simple_repeat	1	30	(0)	1885120
18	32.9	0.9	3.8	chr19	47112179	47112283	(11505333)	+	(GAGC)n	Simple_repeat	1	106	(0)	1885277
32	0.0	0.0	0.0	chr19	47112303	47112332	(11505284)	+	(TCC)n	Simple_repeat	1	30	(0)	1885278
15	12.0	0.0	3.3	chr19	47112359	47112388	(11505228)	+	(CCT)n	Simple_repeat	1	30	(0)	1885279
29	30.4	2.4	1.6	chr19	47112440	47112563	(11505053)	+	(GGC)n	Simple_repeat	1	127	(0)	1885280
17	18.7	3.3	4.8	chr19	47113141	47113200	(11504416)	+	(GAGGCG)n	Simple_repeat	1	62	(0)	1885281
12	21.8	2.7	0.0	chr19	47113254	47113290	(11504326)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	1885281
2050	10.2	2.1	3.7	chr19	47141302	47141440	(11476176)	C	AluSx1	SINE/Alu	(179)	133	2	1885375
44	2.4	0.0	0.0	chr19	47241347	47241388	(11376228)	+	(CA)n	Simple_repeat	1	42	(0)	1885627
20	23.6	2.9	4.2	chr19	47241456	47241525	(11376091)	+	(TG)n	Simple_repeat	1	72	(0)	1885628
34	21.6	3.3	0.0	chr19	47243283	47243373	(11374243)	+	(CCCGC)n	Simple_repeat	1	94	(0)	1885632
12	25.8	0.0	0.0	chr19	47273279	47273315	(11344301)	+	G-rich	Low_complexity	1	37	(0)	1885715
2593	15.0	0.2	2.7	chr19	47289570	47289947	(11327669)	C	MER66B	LTR/ERV1	(86)	400	27	1885762
6407	14.0	2.0	1.5	chr19	47289950	47290265	(11327351)	+	L1M1	LINE/L1	759	1071	(6494)	1885764
1538	15.8	2.1	2.8	chr19	47296010	47296300	(11321316)	+	AluJr	SINE/Alu	1	289	(23)	1885781
489	22.3	0.0	1.0	chr19	47296377	47296480	(11321136)	C	MER5A1	DNA/hAT-Charlie	(0)	166	64	1885782
42	7.2	1.7	0.0	chr19	47296481	47296540	(11321076)	+	(TCCC)n	Simple_repeat	1	61	(0)	1885783
2039	14.6	0.7	0.0	chr19	47348707	47349001	(11268615)	+	AluSz	SINE/Alu	1	297	(15)	1885945
29	22.3	5.6	1.1	chr19	47419754	47419843	(11197773)	+	(TC)n	Simple_repeat	1	95	(0)	1886117
36	21.0	3.9	1.9	chr19	47420522	47420623	(11196993)	+	GA-rich	Low_complexity	1	106	(0)	1886118
29	26.2	4.6	3.8	chr19	47421698	47421848	(11195768)	+	(TGTC)n	Simple_repeat	1	158	(0)	1886124
22	26.8	4.2	5.4	chr19	47421813	47421958	(11195658)	+	(TCCCTC)n	Simple_repeat	1	144	(0)	1886125
13	24.0	0.0	2.4	chr19	47422050	47422090	(11195526)	+	(CGCC)n	Simple_repeat	1	41	(0)	1886126
14	17.7	2.5	2.4	chr19	47423458	47423497	(11194119)	+	(TCTGTC)n	Simple_repeat	1	41	(0)	1886129
36	30.1	3.1	1.8	chr19	47437362	47437452	(11180164)	+	(TC)n	Simple_repeat	1	93	(0)	1886160
44	2.4	0.0	0.0	chr19	47469113	47469154	(11148462)	+	(TG)n	Simple_repeat	1	42	(0)	1886242
36	28.8	5.8	0.6	chr19	47471853	47472024	(11145592)	+	GA-rich	Low_complexity	1	182	(0)	1886246
32	3.2	0.0	0.0	chr19	47472195	47472226	(11145390)	+	(AC)n	Simple_repeat	1	32	(0)	1886247
336	32.0	2.9	1.2	chr19	47507779	47507941	(11109675)	C	MIRb	SINE/MIR	(81)	187	10	1886310
1147	26.2	2.9	3.7	chr19	47644982	47645358	(10972258)	C	L1MC4	LINE/L1	(208)	7834	7461	1886676
191	29.7	9.0	0.9	chr19	47648427	47648538	(10969078)	C	L2a	LINE/L2	(107)	3319	3198	1886682
552	9.2	1.3	0.0	chr19	47648591	47648666	(10968950)	+	AluSq10	SINE/Alu	1	77	(236)	1886683
2007	12.4	0.3	3.4	chr19	47648667	47648852	(10968764)	C	AluSz	SINE/Alu	(0)	312	137	1886684
238	34.6	3.9	0.0	chr19	47698016	47698114	(10919502)	C	L2b	LINE/L2	(23)	3352	3264	1886807
307	33.2	7.3	1.7	chr19	47698299	47698490	(10919126)	+	MIR	SINE/MIR	18	222	(46)	1886808
13	18.1	4.2	4.0	chr19	47719262	47719309	(10898307)	+	(GGCAG)n	Simple_repeat	1	50	(0)	1886868
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
1331	15.4	6.5	4.9	chr19	47778053	47778176	(10839440)	C	AluJb	SINE/Alu	(178)	134	2	1887043
12	7.2	10.3	0.0	chr19	47848998	47849026	(10768590)	+	(CCT)n	Simple_repeat	1	32	(0)	1887232
249	28.3	16.4	0.8	chr19	47849091	47849218	(10768398)	C	MIR	SINE/MIR	(22)	240	89	1887233
227	21.4	2.9	2.0	chr19	47991356	47991941	(10625675)	+	(CCT)n	Simple_repeat	1	603	(0)	1887640
967	26.4	11.4	3.2	chr19	48190313	48190688	(10426928)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	1888161
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
785	25.5	10.9	2.0	chr19	48351326	48351849	(10265767)	+	L2a	LINE/L2	2629	3222	(204)	1888537
188	27.8	1.8	0.0	chr19	48372895	48372948	(10244668)	C	MIRb	SINE/MIR	(52)	216	162	1888601
236	25.9	0.0	0.0	chr19	48372982	48373035	(10244581)	C	MIR	SINE/MIR	(10)	252	199	1888602
15	28.6	2.3	4.5	chr19	48391489	48391575	(10226041)	+	G-rich	Low_complexity	1	89	(0)	1888647
30	0.0	3.5	0.0	chr19	48425016	48425044	(10192572)	+	(TC)n	Simple_repeat	1	30	(0)	1888729
1288	19.9	15.2	5.8	chr19	48481834	48482248	(10135368)	+	MSTA1	LTR/ERVL-MaLR	2	462	(3)	1888845
269	28.8	6.5	0.1	chr19	48554027	48554131	(10063485)	+	MIRb	SINE/MIR	74	187	(21)	1889042
616	23.8	0.0	9.0	chr19	48584131	48584319	(10033297)	C	LTR41C	LTR/ERVL	(142)	559	388	1889146
991	23.2	1.5	5.8	chr19	48584317	48584591	(10033025)	C	LTR41C	LTR/ERVL	(438)	263	1	1889146
1415	26.7	11.0	2.6	chr19	48588604	48589545	(10028071)	C	L2a	LINE/L2	(133)	3293	2253	1889155
13	30.2	0.0	4.5	chr19	48634580	48634645	(9982971)	+	(CCCGCC)n	Simple_repeat	1	66	(0)	1889251
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
14	21.7	0.0	10.3	chr19	48646681	48646758	(9970858)	+	(GGAGCG)n	Simple_repeat	1	78	(0)	1889273
14	16.9	2.3	4.4	chr19	48714440	48714483	(9903133)	+	(CGCGG)n	Simple_repeat	1	45	(0)	1889450
13	18.7	0.0	5.0	chr19	48714563	48714602	(9903014)	+	G-rich	Low_complexity	1	40	(0)	1889451
780	8.7	0.7	0.0	chr19	48834341	48835779	(9781837)	C	MSR1	Satellite	(26)	1448	1	1889737
404	20.0	0.8	6.4	chr19	48868422	48868672	(9748944)	C	HERVIP10FH-int	LTR/ERV1	(4122)	980	744	1889822
14	18.9	4.5	2.2	chr19	48993563	48993606	(9624010)	+	GA-rich	Low_complexity	1	46	(0)	1890139
207	27.9	5.5	0.0	chr19	49060743	49060828	(9556788)	C	L3	LINE/CR1	(80)	4019	3929	1890283
13	17.2	3.9	5.7	chr19	49119142	49119192	(9498424)	+	(TCCCGCC)n	Simple_repeat	1	53	(0)	1890418
15	7.0	2.9	5.7	chr19	49155536	49155569	(9462047)	+	(TCC)n	Simple_repeat	1	35	(0)	1890485
13	19.8	0.0	2.7	chr19	49361581	49361617	(9255999)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1890948
13	15.2	0.0	3.2	chr19	49441582	49441612	(9176004)	+	(GCCCC)n	Simple_repeat	1	31	(0)	1891100
393	12.8	4.5	0.7	chr19	49476276	49476412	(9141204)	+	MSR1	Satellite	1	142	(1)	1891170
236	28.8	13.2	0.8	chr19	49506859	49506991	(9110625)	+	MER45A	DNA/hAT-Tip100	1	152	(26)	1891242
25	25.2	0.0	3.5	chr19	49507008	49507061	(9110555)	+	(CTTTCC)n	Simple_repeat	1	54	(0)	1891243
2412	8.9	0.0	0.3	chr19	49507062	49507365	(9110251)	C	AluSg	SINE/Alu	(6)	304	2	1891244
19	20.3	0.0	0.0	chr19	49591155	49591199	(9026417)	+	(CCCCGCC)n	Simple_repeat	1	45	(0)	1891488
16	11.7	0.0	0.0	chr19	49591232	49591259	(9026357)	+	(GGC)n	Simple_repeat	1	28	(0)	1891489
16	20.2	0.0	4.1	chr19	49591443	49591491	(9026125)	+	(CCCCCTC)n	Simple_repeat	1	49	(0)	1891490
19	3.2	6.2	0.0	chr19	49591600	49591633	(9025983)	+	(CCCT)n	Simple_repeat	1	36	(0)	1891491
332	22.1	2.8	4.8	chr19	49640837	49640967	(8976649)	C	MSR1	Satellite	(0)	128	1	1891595
590	30.4	17.9	1.4	chr19	49672293	49672856	(8944760)	C	L2c	LINE/L2	(380)	3039	2363	1891654
518	21.1	6.4	1.3	chr19	49687518	49687666	(8929950)	+	MER20	DNA/hAT-Charlie	29	185	(34)	1891685
331	27.2	20.4	0.4	chr19	49687768	49688014	(8929602)	C	L2	LINE/L2	(1490)	1929	1621	1891686
70	33.4	1.4	0.7	chr19	49700912	49701189	(8916427)	+	(CT)n	Simple_repeat	1	282	(0)	1891717
288	26.2	5.0	0.2	chr19	49766133	49766271	(8851345)	+	MIRc	SINE/MIR	60	199	(31)	1891890
17	27.6	1.9	0.0	chr19	49802408	49802461	(8815155)	+	(CTCC)n	Simple_repeat	1	55	(0)	1891978
559	29.0	5.1	2.2	chr19	49863080	49863427	(8754189)	+	L2a	LINE/L2	2948	3315	(60)	1892087
342	29.8	14.2	0.0	chr19	49870372	49870529	(8747087)	+	MIRb	SINE/MIR	16	201	(67)	1892099
322	27.9	7.9	4.1	chr19	49922616	49922761	(8694855)	+	MER102b	DNA/hAT-Charlie	19	170	(171)	1892213
15	26.2	3.9	3.7	chr19	50289996	50290073	(8327543)	+	(CATC)n	Simple_repeat	1	81	(0)	1893199
419	16.7	5.5	3.8	chr19	50432521	50432769	(8184847)	+	MSR1	Satellite	1	253	(0)	1893497
257	28.2	0.0	0.0	chr19	50555816	50555886	(8061730)	+	L3b	LINE/CR1	4975	5045	(187)	1893778
12	23.3	0.0	0.0	chr19	50639747	50639781	(7977835)	+	G-rich	Low_complexity	1	35	(0)	1893983
34	5.9	1.8	3.5	chr19	50639795	50639851	(7977765)	+	(GCC)n	Simple_repeat	1	58	(0)	1893984
39	18.8	2.7	3.5	chr19	50719701	50719869	(7897747)	+	(CCTC)n	Simple_repeat	1	167	(0)	1894158
14	33.9	0.0	4.5	chr19	50719891	50719978	(7897638)	+	(CGCCCC)n	Simple_repeat	1	88	(0)	1894159
520	31.0	15.2	2.8	chr19	50721919	50722555	(7895061)	C	L2a	LINE/L2	(2)	3424	2691	1894165
12	14.6	0.0	5.9	chr19	50722644	50722677	(7894939)	+	(CCTCTC)n	Simple_repeat	1	34	(0)	1894166
13	28.2	4.7	0.0	chr19	50821071	50821134	(7796482)	+	(CCTCCTC)n	Simple_repeat	1	67	(0)	1894401
657	12.5	0.8	0.4	chr19	50838533	50838945	(7778671)	C	MSR1	Satellite	(0)	414	1	1894442
312	22.6	28.8	2.5	chr19	51094427	51094712	(7522904)	+	L2a	LINE/L2	3033	3424	(2)	1895001
1909	10.4	9.3	2.8	chr19	51094963	51095251	(7522365)	C	AluSx1	SINE/Alu	(1)	311	2	1895002
415	32.0	11.1	3.9	chr19	51688155	51688544	(6929072)	+	L2c	LINE/L2	2917	3338	(49)	1896047
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
14	7.2	6.9	0.0	chr19	51689179	51689207	(6928409)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	1896049
14	27.5	6.2	1.2	chr19	51689230	51689309	(6928307)	+	G-rich	Low_complexity	1	85	(0)	1896050
217	29.5	5.2	5.8	chr19	51690676	51690812	(6926804)	+	MIR3	SINE/MIR	58	193	(15)	1896053
766	25.6	13.7	1.5	chr19	52191889	52192162	(6425454)	C	L2a	LINE/L2	(17)	3409	3097	1896970
251	29.7	17.4	0.0	chr19	52192171	52192298	(6425318)	C	L2a	LINE/L2	(234)	3192	3038	1896971
2201	11.1	0.0	2.9	chr19	52192299	52192613	(6425003)	C	AluSx	SINE/Alu	(6)	306	1	1896972
1760	16.1	0.3	2.0	chr19	53872514	53872812	(4744804)	C	AluJr	SINE/Alu	(18)	294	1	1900482
29	33.2	2.0	4.5	chr19	53959308	53959504	(4658112)	+	(CTCC)n	Simple_repeat	1	201	(0)	1900676
214	32.0	1.0	4.8	chr19	53977759	53977863	(4639753)	C	MIR3	SINE/MIR	(23)	185	85	1900727
626	12.9	1.9	0.0	chr19	55113917	55114318	(3503298)	+	MSR1	Satellite	1	409	(6)	1903028
11944	12.8	1.1	2.8	chr19	55123223	55125561	(3492055)	+	HERVH-int	LTR/ERV1	1	2609	(5104)	1903049
53	19.1	0.8	2.5	chr19	55145303	55145420	(3472196)	+	GA-rich	Low_complexity	1	119	(0)	1903102
235	34.0	12.0	4.0	chr19	55257535	55257831	(3359785)	+	L2c	LINE/L2	3023	3346	(41)	1903325
208	36.8	1.3	0.0	chr19	55264748	55264823	(3352793)	+	L2a	LINE/L2	3348	3424	(2)	1903337
18	32.9	3.2	0.0	chr19	55283867	55283960	(3333656)	+	(CCCTCCC)n	Simple_repeat	1	97	(0)	1903384
17	34.5	0.0	0.0	chr19	55284033	55284098	(3333518)	+	G-rich	Low_complexity	1	66	(0)	1903385
14	13.0	5.9	0.0	chr19	55341277	55341310	(3276306)	+	(CCCTC)n	Simple_repeat	1	36	(0)	1903542
612	11.7	2.4	1.3	chr19	55368979	55369203	(3248413)	C	MSR1	Satellite	(1)	227	1	1903594
1737	17.6	3.4	0.3	chr19	55395998	55396281	(3221335)	+	AluJo	SINE/Alu	3	295	(17)	1903645
672	23.9	12.5	5.0	chr19	55396295	55396479	(3221137)	C	L1ME3B	LINE/L1	(16)	6226	6012	1903646
113	2.6	0.8	0.8	chr19	55396480	55396599	(3221017)	+	(CCCCT)n	Simple_repeat	1	121	(0)	1903647
47	21.5	2.9	7.1	chr19	55443304	55443507	(3174109)	+	GA-rich	Low_complexity	1	210	(0)	1903744
791	18.9	10.5	4.4	chr19	55443556	55443760	(3173856)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1903745
231	16.7	0.0	2.0	chr19	55447755	55447803	(3169813)	+	Zaphod2	DNA/hAT-Tip100	3470	3517	(7)	1903758
589	10.8	7.6	0.1	chr19	55448013	55449159	(3168457)	+	(AC)n	Simple_repeat	1	1234	(0)	1903759
18	17.6	8.5	3.4	chr19	55516890	55516971	(3100645)	+	(GCACCC)n	Simple_repeat	1	89	(0)	1903899
90	30.7	0.3	1.4	chr19	55528233	55528526	(3089090)	+	(TC)n	Simple_repeat	1	295	(0)	1903931
12	13.2	9.3	2.1	chr19	55580979	55581021	(3036595)	+	G-rich	Low_complexity	1	47	(0)	1904074
12	19.3	0.0	5.1	chr19	55600208	55600246	(3017370)	+	(GCGG)n	Simple_repeat	1	39	(0)	1904120
19	11.3	2.5	2.4	chr19	55600272	55600311	(3017305)	+	(GCC)n	Simple_repeat	1	41	(0)	1904121
15	17.7	5.0	2.4	chr19	55600511	55600550	(3017066)	+	(CG)n	Simple_repeat	1	42	(0)	1904123
21	13.8	0.0	7.3	chr19	55605591	55605645	(3011971)	+	G-rich	Low_complexity	1	55	(0)	1904131
219	33.3	2.0	3.0	chr19	55643126	55643224	(2974392)	+	MIRc	SINE/MIR	101	198	(70)	1904222
333	27.8	10.0	0.0	chr19	55643241	55643348	(2974268)	+	MIRb	SINE/MIR	34	153	(115)	1904223
180	34.1	3.3	0.0	chr19	55671695	55671782	(2945834)	+	L2a	LINE/L2	3336	3426	(0)	1904264
437	29.8	7.1	0.0	chr19	56066676	56066846	(2550770)	C	MER20	DNA/hAT-Charlie	(5)	214	31	1905028
14	5.0	0.0	0.0	chr19	56140757	56140777	(2476839)	+	(CTC)n	Simple_repeat	1	21	(0)	1905199
13	29.8	1.8	1.7	chr19	56172133	56172189	(2445427)	+	G-rich	Low_complexity	1	58	(0)	1905279
447	17.0	13.2	0.0	chr19	56172190	56172301	(2445315)	+	L1MC4	LINE/L1	7914	8042	(0)	1905280
19	15.9	2.4	0.0	chr19	56595157	56595198	(2022418)	+	(GCTCG)n	Simple_repeat	1	43	(0)	1906049
1579	17.9	0.7	6.4	chr19	58381510	58381838	(235778)	C	AluJb	SINE/Alu	(0)	312	3	1909441
436	27.0	3.8	2.3	chr19	58498983	58499111	(118505)	+	MIRb	SINE/MIR	67	197	(71)	1909629
11	24.3	5.5	1.7	chr19	58573164	58573218	(44398)	+	(CCTTCC)n	Simple_repeat	1	58	(0)	1909747
25	28.3	2.6	4.2	chr19	58573746	58573860	(43756)	+	GA-rich	Low_complexity	1	118	(0)	1909748
33	34.5	1.6	2.6	chr2	46611	46800	(242146729)	+	(CCGCCC)n	Simple_repeat	1	193	(0)	1910843
55	16.3	6.8	1.3	chr2	8681665	8681812	(233511717)	+	(CCCTCCT)n	Simple_repeat	1	158	(0)	1921728
3184	20.1	6.5	9.5	chr2	8804731	8805671	(233387858)	C	MER21C	LTR/ERVL	(1)	937	27	1921894
14	11.1	0.0	6.1	chr2	9003628	9003660	(233189869)	+	(CGCC)n	Simple_repeat	1	33	(0)	1922157
12	14.9	3.3	0.0	chr2	9003744	9003773	(233189756)	+	(GGCCGG)n	Simple_repeat	1	31	(0)	1922158
29	25.3	0.0	8.1	chr2	9003769	9003904	(233189625)	+	(CCCCGC)n	Simple_repeat	1	136	(0)	1922159
15	17.6	4.1	3.9	chr2	9630679	9630727	(232562802)	+	(CGG)n	Simple_repeat	1	51	(0)	1923321
19	22.6	1.6	3.2	chr2	9800023	9800083	(232393446)	+	(CTTCC)n	Simple_repeat	1	62	(0)	1923677
235	24.5	15.3	0.0	chr2	10072646	10072739	(232120790)	C	L1MC5a	LINE/L1	(13)	2764	2654	1924117
349	18.3	18.1	3.7	chr2	10135551	10135658	(232057871)	+	L1MEd	LINE/L1	2018	2144	(4942)	1924237
19	13.0	4.8	0.0	chr2	10580345	10580386	(231613143)	+	(CCCTCC)n	Simple_repeat	1	44	(0)	1925008
327	24.4	4.1	8.4	chr2	11073511	11073689	(231119840)	C	L1ME3G	LINE/L1	(193)	731	561	1925973
190	22.6	9.7	6.7	chr2	11753201	11753290	(230440239)	+	L3	LINE/CR1	3110	3202	(897)	1927209
88	18.4	4.4	2.1	chr2	18475722	18475948	(223717581)	+	GA-rich	Low_complexity	1	237	(0)	1937507
33	0.0	0.0	0.0	chr2	18475952	18475982	(223717547)	+	(GGGAA)n	Simple_repeat	1	31	(0)	1937508
571	28.6	8.3	2.6	chr2	20539154	20539379	(221654150)	C	MIRb	SINE/MIR	(15)	253	14	1940542
15	18.4	7.0	1.6	chr2	20666536	20666601	(221526928)	+	(CCTCCCCT)n	Simple_repeat	1	69	(0)	1940718
2354	9.6	0.3	0.0	chr2	24045320	24045620	(218147909)	+	AluSx	SINE/Alu	1	302	(10)	1945400
35	13.7	3.3	4.3	chr2	24045621	24045690	(218147839)	+	GA-rich	Low_complexity	19	89	(0)	1945401
789	19.4	0.0	2.0	chr2	24045691	24045837	(218147692)	+	AluJb	SINE/Alu	1	144	(168)	1945402
205	29.9	9.4	8.3	chr2	24048795	24048962	(218144567)	+	L2c	LINE/L2	3208	3377	(10)	1945408
733	24.6	4.3	1.1	chr2	24317589	24317769	(217875760)	+	HERVL40-int	LTR/ERVL	3226	3412	(2118)	1945849
478	23.0	13.4	1.2	chr2	24317781	24317943	(217875586)	+	HERVL40-int	LTR/ERVL	3537	3722	(1808)	1945849
534	19.8	5.5	0.0	chr2	24317948	24318068	(217875461)	C	L1MC1	LINE/L1	(0)	6333	6206	1945851
19	22.1	0.0	0.0	chr2	24490925	24490971	(217702558)	+	G-rich	Low_complexity	1	47	(0)	1946257
285	29.1	8.8	0.0	chr2	24982239	24982341	(217211188)	+	L2b	LINE/L2	2973	3085	(290)	1947060
34	18.7	0.0	2.6	chr2	24982460	24982537	(217210992)	+	G-rich	Low_complexity	1	78	(0)	1947061
217	32.2	13.1	1.1	chr2	24982548	24982641	(217210888)	+	L3	LINE/CR1	3108	3214	(885)	1947062
2401	16.1	2.8	3.4	chr2	25109024	25109617	(217083912)	+	L1MB5	LINE/L1	5167	5741	(439)	1947323
1329	15.1	7.8	0.8	chr2	25109619	25109879	(217083650)	+	L1MB5	LINE/L1	5894	6174	(0)	1947323
14	27.2	1.4	5.4	chr2	25315134	25315206	(216878323)	+	(CCCTTC)n	Simple_repeat	1	74	(0)	1947710
16	26.5	2.6	3.8	chr2	25340308	25340384	(216853145)	+	G-rich	Low_complexity	1	79	(0)	1947752
32	3.2	0.0	0.0	chr2	25491138	25491169	(216702360)	+	(CA)n	Simple_repeat	1	32	(0)	1948007
21	16.1	1.9	1.9	chr2	25491170	25491217	(216702312)	+	GA-rich	Low_complexity	4	51	(0)	1948008
13	21.2	2.6	0.0	chr2	26244721	26244758	(215948771)	+	(TGGCCCC)n	Simple_repeat	1	39	(0)	1949598
551	28.3	6.5	5.1	chr2	26352801	26353024	(215840505)	+	MER102c	DNA/hAT-Charlie	89	307	(24)	1949807
246	26.0	1.4	0.0	chr2	26645264	26645336	(215548193)	C	MIRc	SINE/MIR	(0)	268	195	1950303
12	0.0	0.0	5.0	chr2	26847947	26847966	(215345563)	+	(GGC)n	Simple_repeat	1	20	(0)	1950752
12	21.3	6.8	0.0	chr2	26848158	26848201	(215345328)	+	(GCC)n	Simple_repeat	1	47	(0)	1950753
17	10.4	4.4	4.3	chr2	26971130	26971174	(215222355)	+	(CCTCCCT)n	Simple_repeat	1	47	(0)	1950981
19	22.9	1.2	6.2	chr2	27250845	27250924	(214942605)	+	(CCCTC)n	Simple_repeat	1	81	(0)	1951437
1772	17.9	0.0	3.5	chr2	27279630	27279948	(214913581)	+	AluJb	SINE/Alu	1	308	(4)	1951500
19	11.1	2.3	2.3	chr2	27279949	27279983	(214913546)	+	GA-rich	Low_complexity	7	42	(0)	1951501
26	25.2	2.2	3.3	chr2	28314956	28315045	(213878484)	+	A-rich	Low_complexity	1	92	(0)	1953350
43	25.0	5.9	3.0	chr2	28315046	28315136	(213878393)	+	GA-rich	Low_complexity	6	191	(0)	1953351
196	36.0	0.0	2.3	chr2	28315137	28315224	(213878305)	+	MIRb	SINE/MIR	2	87	(181)	1953352
29	0.0	3.2	0.0	chr2	28315229	28315259	(213878270)	+	(GTTT)n	Simple_repeat	1	32	(0)	1953353
14	22.7	0.0	2.3	chr2	28392229	28392271	(213801258)	+	(CTCCCGG)n	Simple_repeat	1	43	(0)	1953483
25	16.9	4.3	2.7	chr2	28392701	28392770	(213800759)	+	(CCT)n	Simple_repeat	1	73	(0)	1953484
13	17.5	1.6	10.8	chr2	28393615	28393678	(213799851)	+	(GCG)n	Simple_repeat	1	65	(0)	1953487
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
575	26.1	1.3	0.7	chr2	30421749	30421902	(211771627)	+	MamRTE1	LINE/RTE-BovB	3579	3733	(79)	1956970
464	34.9	8.2	2.1	chr2	31170353	31170585	(211022944)	C	MIRb	SINE/MIR	(5)	263	5	1958080
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
427	29.4	6.7	1.5	chr2	37350077	37350273	(204843256)	C	L2b	LINE/L2	(237)	3138	2931	1967588
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
19	11.2	0.0	0.0	chr2	39121123	39121151	(203072378)	+	(GA)n	Simple_repeat	1	29	(0)	1970593
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
1984	18.1	1.5	5.8	chr2	39484112	39484521	(202709008)	+	MSTD	LTR/ERVL-MaLR	3	394	(2)	1971294
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
472	22.1	14.0	2.9	chr2	39779499	39779658	(202413871)	C	MIR3	SINE/MIR	(14)	194	20	1971735
3748	16.3	10.2	2.2	chr2	42309448	42310221	(199883308)	C	L1MB7	LINE/L1	(587)	5597	4769	1975317
62	11.3	0.0	1.0	chr2	42310264	42310363	(199883166)	+	(CTTCCC)n	Simple_repeat	1	100	(0)	1975319
2073	13.6	0.0	0.4	chr2	42310367	42310645	(199882884)	C	AluSz	SINE/Alu	(34)	278	1	1975320
13	14.7	0.0	3.1	chr2	42568923	42568958	(199624571)	+	(CTCCC)n	Simple_repeat	1	34	(0)	1975884
346	29.5	8.0	4.8	chr2	42904205	42904350	(199289179)	C	MIRb	SINE/MIR	(68)	200	50	1976521
239	35.3	4.6	0.0	chr2	43042336	43042522	(199151007)	C	L2c	LINE/L2	(189)	3198	3003	1976763
33	5.6	0.0	0.0	chr2	45651060	45651096	(196542433)	+	(CA)n	Simple_repeat	1	37	(0)	1981029
22	16.0	8.8	2.3	chr2	45651173	45651252	(196542277)	+	(GGCGAGC)n	Simple_repeat	1	87	(0)	1981030
418	25.0	1.6	2.4	chr2	46500543	46500669	(195692860)	+	L1ME4a	LINE/L1	5563	5688	(436)	1982356
331	30.6	10.6	1.8	chr2	46847188	46847350	(195346179)	C	MIR3	SINE/MIR	(27)	181	3	1982926
1500	16.7	0.4	0.8	chr2	47036611	47036844	(195156685)	+	AluJr	SINE/Alu	37	269	(43)	1983273
14	7.7	11.6	2.1	chr2	47209130	47209172	(194984357)	+	(TTCCCCTC)n	Simple_repeat	1	48	(0)	1983541
13	13.2	0.0	0.0	chr2	47238137	47238161	(194955368)	+	(CTC)n	Simple_repeat	1	25	(0)	1983604
113	13.4	10.6	1.6	chr2	47480013	47480350	(194713179)	+	(TTCTCCC)n	Simple_repeat	1	368	(0)	1984186
346	30.1	2.4	3.1	chr2	47512665	47512791	(194680738)	+	LTR33A	LTR/ERVL	45	170	(350)	1984239
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
18	14.2	10.6	0.0	chr2	47906280	47906326	(194287203)	+	(TC)n	Simple_repeat	1	52	(0)	1985046
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
17	13.2	1.4	4.0	chr2	48530025	48530063	(193663466)	+	G-rich	Low_complexity	1	37	(0)	1986145
34	12.1	0.0	0.0	chr2	48530116	48530170	(193663359)	+	(TCC)n	Simple_repeat	1	55	(0)	1986146
192	33.3	10.5	1.0	chr2	48715839	48715941	(193477588)	+	L2a	LINE/L2	3295	3408	(18)	1986439
2829	12.7	9.3	4.2	chr2	53957165	53957664	(188235865)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	1993447
967	24.4	15.7	4.4	chr2	53957665	53957825	(188235704)	+	L1MC5	LINE/L1	8473	8667	(637)	1993446
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
865	29.4	6.6	6.6	chr2	55482193	55482632	(186710897)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	146	1995982
2175	7.0	7.1	0.0	chr2	55519117	55519403	(186674126)	C	AluSx	SINE/Alu	(0)	312	4	1996064
18	23.8	3.5	1.7	chr2	55923816	55923873	(186269656)	+	GA-rich	Low_complexity	1	60	(0)	1996754
13	16.3	3.6	7.0	chr2	55923883	55923937	(186269592)	+	(GCGCA)n	Simple_repeat	1	57	(0)	1996755
13	18.5	2.6	2.5	chr2	58428270	58428308	(183765221)	+	GA-rich	Low_complexity	1	40	(0)	1999768
1400	24.3	3.2	6.7	chr2	58536456	58537012	(183656517)	C	MER39	LTR/ERV1	(4)	703	7	1999937
14	26.3	4.6	1.5	chr2	60551767	60551831	(181641698)	+	(GGCG)n	Simple_repeat	1	68	(0)	2002574
15	18.4	2.7	0.0	chr2	60551851	60551887	(181641642)	+	(GCC)n	Simple_repeat	1	38	(0)	2002575
228	20.4	0.0	2.0	chr2	60551983	60552032	(181641497)	+	L1M2	LINE/L1	3574	3622	(2521)	2002576
19	0.0	3.9	0.0	chr2	60552422	60552447	(181641082)	+	(CGG)n	Simple_repeat	1	27	(0)	2002579
11	16.7	7.2	6.8	chr2	60552525	60552593	(181640936)	+	(CCGTCC)n	Simple_repeat	1	74	(0)	2002580
27	0.0	0.0	0.0	chr2	60553483	60553511	(181640018)	+	(A)n	Simple_repeat	1	29	(0)	2002583
35	6.6	2.1	0.0	chr2	60553511	60553558	(181639971)	+	(AG)n	Simple_repeat	1	49	(0)	2002584
16	19.5	3.5	5.0	chr2	60555237	60555305	(181638224)	+	(CCG)n	Simple_repeat	1	67	(0)	2002585
13	21.0	4.5	0.0	chr2	61470531	61470574	(180722955)	+	(CCGCCCG)n	Simple_repeat	1	46	(0)	2004393
13	18.8	0.0	5.0	chr2	61471025	61471035	(180722494)	+	(CACCGC)n	Simple_repeat	1	39	(0)	2004394
16	11.6	0.0	0.0	chr2	61471036	61471063	(180722466)	+	(CGC)n	Simple_repeat	1	28	(0)	2004395
1202	13.9	0.9	14.2	chr2	61483301	61483560	(180709969)	+	L1PB2	LINE/L1	5927	6151	(0)	2004424
31	15.5	4.7	6.3	chr2	61537423	61537528	(180656001)	+	(CCG)n	Simple_repeat	1	111	(0)	2004520
14	20.5	0.0	2.4	chr2	61537599	61537639	(180655890)	+	G-rich	Low_complexity	1	41	(0)	2004521
37	0.0	0.0	0.0	chr2	61537753	61537784	(180655745)	+	(AC)n	Simple_repeat	1	32	(0)	2004522
12	4.5	4.0	3.9	chr2	61694637	61694661	(180498868)	+	(AGG)n	Simple_repeat	1	26	(0)	2004961
13	20.4	0.0	2.8	chr2	61694805	61694840	(180498689)	+	G-rich	Low_complexity	1	36	(0)	2004962
425	32.2	11.1	6.0	chr2	64145552	64146311	(178047218)	C	L2a	LINE/L2	(0)	3426	2572	2008907
17	18.8	0.0	2.3	chr2	64453917	64453960	(177739569)	+	(GGCAGGA)n	Simple_repeat	1	44	(0)	2009384
12	15.8	9.5	0.0	chr2	64454147	64454188	(177739341)	+	G-rich	Low_complexity	1	46	(0)	2009385
15	12.0	0.0	3.3	chr2	64454249	64454278	(177739251)	+	(GCA)n	Simple_repeat	1	30	(0)	2009386
12	21.6	0.0	4.9	chr2	64454328	64454368	(177739161)	+	(CCCT)n	Simple_repeat	1	41	(0)	2009387
27	27.4	4.3	0.0	chr2	64454389	64454480	(177739049)	+	(GC)n	Simple_repeat	1	96	(0)	2009388
19	16.6	4.3	0.0	chr2	64524370	64524416	(177669113)	+	(GCGGAG)n	Simple_repeat	1	49	(0)	2009513
22	3.6	0.0	0.0	chr2	64750746	64750774	(177442755)	+	(GAG)n	Simple_repeat	1	29	(0)	2009875
18	6.3	2.7	5.3	chr2	64750840	64750876	(177442653)	+	(GGC)n	Simple_repeat	1	38	(0)	2009876
14	24.5	0.0	2.2	chr2	64876469	64876513	(177317016)	+	(CTCCTC)n	Simple_repeat	1	45	(0)	2010113
26	9.8	2.2	0.0	chr2	64988911	64988955	(177204574)	+	(CCTCC)n	Simple_repeat	1	46	(0)	2010348
284	23.2	0.0	0.0	chr2	65057598	65057653	(177135876)	+	L2a	LINE/L2	3350	3405	(21)	2010493
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
1055	20.7	5.3	2.9	chr2	65382546	65382858	(176810671)	C	MER33	DNA/hAT-Charlie	(0)	324	4	2011144
36	0.0	0.0	2.9	chr2	66555255	66555289	(175638240)	+	(TC)n	Simple_repeat	1	35	(0)	2012896
18	28.0	3.2	3.1	chr2	66573946	66573984	(175619545)	+	G-rich	Low_complexity	1	67	(33)	2012923
26	12.4	2.3	0.0	chr2	66573985	66574028	(175619501)	+	(GA)n	Simple_repeat	1	45	(0)	2012924
18	28.0	3.2	3.1	chr2	66574029	66574045	(175619484)	+	G-rich	Low_complexity	68	100	(0)	2012923
33	24.8	6.1	0.8	chr2	66575335	66575449	(175618080)	+	(TC)n	Simple_repeat	1	122	(0)	2012928
211	21.2	0.4	4.3	chr2	68362303	68362367	(173831162)	+	L2c	LINE/L2	3309	3383	(4)	2015504
12	26.2	0.0	2.3	chr2	69387605	69387647	(172805882)	+	(GCAGGAA)n	Simple_repeat	1	43	(0)	2016985
391	27.3	5.3	1.7	chr2	69561385	69561574	(172631955)	C	MIRc	SINE/MIR	(18)	250	51	2017294
2800	22.8	6.0	2.5	chr2	69561607	69562318	(172631211)	C	L1ME1	LINE/L1	(30)	6149	5412	2017295
14	20.9	4.5	0.0	chr2	70089588	70089631	(172103898)	+	G-rich	Low_complexity	1	46	(0)	2018349
14	20.2	5.2	6.2	chr2	70142568	70142644	(172050885)	+	(CCCGTC)n	Simple_repeat	1	81	(0)	2018487
12	13.9	6.2	0.0	chr2	70303912	70303943	(171889586)	+	(TTGAA)n	Simple_repeat	1	34	(0)	2018837
2238	10.4	0.0	2.9	chr2	70304156	70304462	(171889067)	+	AluSx1	SINE/Alu	5	302	(10)	2018838
12	11.6	3.3	3.2	chr2	70767200	70767229	(171426300)	+	G-rich	Low_complexity	1	31	(0)	2019580
12	17.6	3.1	0.0	chr2	70767439	70767470	(171426059)	+	(CGCCC)n	Simple_repeat	1	33	(0)	2019581
21	28.1	3.4	1.1	chr2	70767477	70767490	(171426039)	+	(GAGGC)n	Simple_repeat	1	26	(65)	2019582
22	10.5	2.3	2.2	chr2	70767491	70767534	(171425995)	+	G-rich	Low_complexity	1	45	(0)	2019583
21	28.1	3.4	1.1	chr2	70767535	70767565	(171425964)	+	(GAGGC)n	Simple_repeat	27	91	(0)	2019582
21	14.3	2.8	4.4	chr2	70935804	70935859	(171257670)	+	G-rich	Low_complexity	1	55	(0)	2019862
1526	13.6	8.0	3.0	chr2	70945743	70945870	(171247659)	C	L1MA5A	LINE/L1	(187)	6110	5983	2019874
326	25.9	2.3	1.2	chr2	71510235	71510320	(170683209)	+	MER5A	DNA/hAT-Charlie	47	133	(56)	2020763
19	12.5	0.0	7.8	chr2	72147876	72147926	(170045603)	+	G-rich	Low_complexity	1	51	(0)	2021633
17	13.4	5.9	0.0	chr2	72941118	72941151	(169252378)	+	(CT)n	Simple_repeat	1	36	(0)	2022830
257	33.3	1.2	0.0	chr2	72941247	72941330	(169252199)	C	MIRb	SINE/MIR	(76)	192	108	2022831
13	21.5	2.1	4.2	chr2	72963533	72963579	(169229950)	+	G-rich	Low_complexity	1	48	(0)	2022853
14	18.2	1.9	7.4	chr2	72980115	72980125	(169213404)	+	(CCTCC)n	Simple_repeat	1	24	(30)	2022885
17	6.9	9.7	0.0	chr2	72980126	72980156	(169213373)	+	(CT)n	Simple_repeat	1	34	(0)	2022886
14	18.2	1.9	7.4	chr2	72980157	72980167	(169213362)	+	(CCTCC)n	Simple_repeat	25	54	(0)	2022885
413	29.1	6.8	2.6	chr2	72980181	72980335	(169213194)	C	L1ME4b	LINE/L1	(31)	861	700	2022887
30	19.8	1.9	6.5	chr2	73284383	73284487	(168909042)	+	GA-rich	Low_complexity	1	107	(0)	2023446
15	23.1	0.0	4.0	chr2	73284634	73284683	(168908846)	+	(GGCTCCC)n	Simple_repeat	1	50	(0)	2023447
13	4.5	4.3	0.0	chr2	73297111	73297133	(168896396)	+	(TGAA)n	Simple_repeat	1	24	(0)	2023463
274	20.3	3.2	4.0	chr2	73297134	73297219	(168896310)	C	L2c	LINE/L2	(4)	3422	3334	2023464
3235	24.6	12.6	3.1	chr2	73928428	73929136	(168264393)	C	L2a	LINE/L2	(239)	3187	2462	2024466
1579	18.1	1.1	0.4	chr2	73929137	73929396	(168264133)	C	AluJb	SINE/Alu	(37)	275	14	2024468
712	24.0	0.6	3.3	chr2	74010509	74010689	(168182840)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	2024620
928	29.7	8.9	10.1	chr2	74444321	74444886	(167748643)	C	MLT1K	LTR/ERVL-MaLR	(36)	559	1	2025400
393	28.9	1.3	4.4	chr2	75315974	75316132	(166877397)	+	MamGypLTR2c	LTR/Gypsy	907	1060	(8)	2026784
2197	9.9	0.7	0.3	chr2	75316264	75316546	(166876983)	+	AluSx1	SINE/Alu	1	284	(28)	2026789
1985	12.6	7.1	7.1	chr2	75637094	75637433	(166556096)	C	Tigger2a	DNA/TcMar-Tigger	(53)	381	25	2027280
331	32.8	13.8	3.5	chr2	75637458	75638291	(166555238)	+	L2c	LINE/L2	2021	2954	(465)	2027282
23	18.5	0.0	0.0	chr2	85133230	85133277	(157060252)	+	(GT)n	Simple_repeat	1	48	(0)	2040181
19	15.0	6.2	4.3	chr2	85133338	85133404	(157060125)	+	(CCTC)n	Simple_repeat	1	68	(0)	2040182
12	28.1	1.9	1.9	chr2	85133482	85133534	(157059995)	+	(GCCGG)n	Simple_repeat	1	54	(0)	2040183
188	26.7	0.0	2.2	chr2	85243730	85243775	(156949754)	C	L2a	LINE/L2	(5)	3421	3377	2040384
15	16.9	10.6	0.0	chr2	85539084	85539130	(156654399)	+	(GC)n	Simple_repeat	1	52	(0)	2040998
12	16.6	4.5	4.3	chr2	85539144	85539187	(156654342)	+	(CCGCG)n	Simple_repeat	1	46	(0)	2040999
13	13.5	6.7	4.2	chr2	85539558	85539602	(156653927)	+	(TCCCT)n	Simple_repeat	1	48	(0)	2041000
544	27.5	4.2	4.6	chr2	85679606	85679630	(156513899)	+	L2a	LINE/L2	3187	3211	(215)	2041281
2549	7.1	0.7	0.0	chr2	85679631	85679938	(156513591)	C	AluSx	SINE/Alu	(0)	312	3	2041282
16	24.5	3.3	1.6	chr2	85754061	85754120	(156439409)	+	G-rich	Low_complexity	1	62	(0)	2041440
234	28.3	0.0	0.3	chr2	85755911	85755981	(156437548)	+	MIR	SINE/MIR	54	123	(85)	2041443
15	23.7	0.0	7.3	chr2	86807811	86807878	(155385651)	+	G-rich	Low_complexity	1	68	(0)	2043240
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
71	10.8	4.1	0.0	chr2	86832916	86833038	(155360491)	+	(TCTCC)n	Simple_repeat	1	128	(0)	2043287
2449	9.7	0.0	0.0	chr2	88099443	88099752	(154093777)	+	AluSx4	SINE/Alu	1	310	(0)	2045293
56	12.7	3.1	0.0	chr2	95297163	95297258	(146896271)	+	GA-rich	Low_complexity	1	99	(0)	2050470
19	20.4	0.0	3.7	chr2	95345722	95345775	(146847754)	+	G-rich	Low_complexity	1	54	(0)	2050548
12	26.2	0.0	4.1	chr2	95346301	95346349	(146847180)	+	(CCCCT)n	Simple_repeat	1	49	(0)	2050549
14	17.6	0.0	0.0	chr2	95346429	95346460	(146847069)	+	G-rich	Low_complexity	1	32	(0)	2050550
17	18.2	0.0	4.3	chr2	95352551	95352597	(146840932)	+	(CCCT)n	Simple_repeat	1	47	(0)	2050562
242	34.6	7.1	2.5	chr2	96092301	96092460	(146101069)	C	MIRb	SINE/MIR	(45)	223	56	2051547
97	21.9	3.2	1.1	chr2	96099728	96099979	(146093550)	+	GA-rich	Low_complexity	1	260	(0)	2051560
479	30.2	11.9	0.5	chr2	96099992	96100207	(146093322)	+	MIR	SINE/MIR	8	251	(11)	2051561
105	21.8	3.1	2.4	chr2	96103993	96104281	(146089248)	+	(CTC)n	Simple_repeat	1	298	(0)	2051569
13	22.9	6.8	1.6	chr2	96626325	96626383	(145567146)	+	GA-rich	Low_complexity	1	63	(0)	2052461
25	28.2	2.0	6.0	chr2	96760837	96760984	(145432545)	+	G-rich	Low_complexity	1	151	(0)	2052732
53	29.8	2.6	0.5	chr2	96971180	96971369	(145222160)	+	(TCTC)n	Simple_repeat	1	195	(0)	2053094
5368	20.7	6.5	3.7	chr2	97935677	97936999	(144256530)	+	L1M4	LINE/L1	2	1364	(6153)	2054304
3015	8.5	1.9	9.6	chr2	98034586	98035107	(144158422)	C	LTR21A	LTR/ERV1	(0)	481	1	2054450
2453	10.6	0.0	0.0	chr2	98466034	98466345	(143727184)	C	AluSz	SINE/Alu	(0)	312	1	2055053
15	24.3	3.8	0.0	chr2	98837169	98837221	(143356308)	+	A-rich	Low_complexity	1	55	(0)	2055554
16	0.0	0.0	0.0	chr2	98837207	98837224	(143356305)	+	(A)n	Simple_repeat	1	18	(0)	2055555
229	9.1	0.0	0.0	chr2	99695497	99695529	(142498000)	C	hAT-16_Crp	DNA/hAT-Charlie	(2119)	1327	1295	2056863
34	3.0	0.0	0.0	chr2	99882056	99882089	(142311440)	+	(TC)n	Simple_repeat	1	34	(0)	2057106
16	13.7	0.0	0.0	chr2	100106431	100106455	(142087074)	+	(A)n	Simple_repeat	1	25	(0)	2057399
27	16.0	0.0	6.8	chr2	100263118	100263190	(141930339)	+	(CCTT)n	Simple_repeat	1	73	(0)	2057636
236	30.4	8.2	7.5	chr2	100263191	100263336	(141930193)	C	L2c	LINE/L2	(0)	3387	3241	2057637
14	28.6	2.6	3.8	chr2	100417614	100417690	(141775839)	+	(CGCC)n	Simple_repeat	1	79	(0)	2057844
15	24.8	2.1	0.0	chr2	100417905	100417952	(141775577)	+	A-rich	Low_complexity	1	49	(0)	2057845
14	13.6	4.5	4.3	chr2	100819224	100819267	(141374262)	+	GA-rich	Low_complexity	1	46	(0)	2058572
18	18.6	0.0	5.6	chr2	101252681	101252734	(140940795)	+	(CGCCC)n	Simple_repeat	1	54	(0)	2059271
41	0.0	0.0	0.0	chr2	101519020	101519057	(140674472)	+	(CTCCCCTCC)n	Simple_repeat	1	38	(0)	2059732
30	14.0	2.6	5.0	chr2	104853225	104853302	(137340227)	+	GA-rich	Low_complexity	1	80	(0)	2064063
33	31.6	1.5	0.8	chr2	104854134	104854263	(137339266)	+	GA-rich	Low_complexity	1	132	(0)	2064065
22	10.2	2.3	2.2	chr2	104854844	104854887	(137338642)	+	(GAGGA)n	Simple_repeat	1	45	(0)	2064067
823	29.9	8.7	6.7	chr2	109478815	109479380	(132714149)	C	MLT1G1	LTR/ERVL-MaLR	(1)	578	1	2070739
2176	8.8	1.8	0.4	chr2	109604445	109604717	(132588812)	+	AluYm1	SINE/Alu	1	277	(34)	2070939
17	35.4	2.2	2.1	chr2	109604718	109604735	(132588794)	+	GA-rich	Low_complexity	75	92	(0)	2070940
28	23.9	3.3	1.1	chr2	110732466	110732555	(131460974)	+	G-rich	Low_complexity	1	93	(0)	2072634
19	24.7	0.0	1.8	chr2	111117216	111117270	(131076259)	+	G-rich	Low_complexity	1	55	(0)	2073124
1760	23.2	3.1	3.9	chr2	113137012	113137530	(129055999)	C	LTR55	LTR/ERVL?	(1)	547	33	2076299
16	19.8	4.3	0.0	chr2	113225941	113225986	(128967543)	+	GA-rich	Low_complexity	1	48	(0)	2076444
12	21.8	2.9	0.0	chr2	113226089	113226122	(128967407)	+	(TCTC)n	Simple_repeat	1	35	(0)	2076445
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
490	31.6	0.7	0.0	chr2	118183928	118184066	(124009463)	C	MARNA	DNA/TcMar-Mariner	(348)	238	99	2083308
20	22.4	1.3	5.3	chr2	118185529	118185603	(124007926)	+	G-rich	Low_complexity	1	76	(0)	2083311
851	27.1	10.6	9.3	chr2	118882677	118883417	(123310112)	+	LTR41	LTR/ERVL	1	752	(16)	2084381
17	8.5	2.3	6.8	chr2	119431777	119431819	(122761710)	+	(CGCCC)n	Simple_repeat	1	44	(0)	2085325
22	6.5	0.0	0.0	chr2	119545028	119545060	(122648469)	+	(GAGGG)n	Simple_repeat	1	33	(0)	2085554
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
19	13.0	0.0	0.0	chr2	120344724	120344757	(121848772)	+	(GGGGA)n	Simple_repeat	1	34	(0)	2086801
212	29.1	12.0	3.1	chr2	120395831	120395972	(121797557)	+	MIRb	SINE/MIR	65	223	(45)	2086896
205	21.9	8.9	4.7	chr2	120396062	120396147	(121797382)	C	MamTip2	DNA/hAT-Tip100	(187)	118	29	2086897
53	9.1	0.0	0.0	chr2	120680500	120680571	(121512958)	+	(GT)n	Simple_repeat	1	72	(0)	2087395
15	18.4	2.7	0.0	chr2	120736788	120736824	(121456705)	+	(CCTT)n	Simple_repeat	1	38	(0)	2087494
15	35.9	1.0	2.9	chr2	120736815	120736915	(121456614)	+	(CCTCC)n	Simple_repeat	1	102	(0)	2087495
190	28.6	10.6	0.0	chr2	120758818	120758901	(121434628)	C	MIR3	SINE/MIR	(34)	174	81	2087522
4065	16.3	5.8	2.9	chr2	120759115	120759950	(121433579)	C	MER21B	LTR/ERVL	(2)	866	5	2087523
22	24.6	3.6	5.2	chr2	120867792	120867902	(121325627)	+	GA-rich	Low_complexity	1	115	(0)	2087683
1877	13.3	0.3	2.3	chr2	121650282	121650581	(120542948)	C	AluJb	SINE/Alu	(18)	294	1	2089036
19	15.3	3.0	7.2	chr2	127050192	127050258	(115143271)	+	G-rich	Low_complexity	1	69	(0)	2096811
198	16.9	9.2	0.0	chr2	127087363	127087421	(115106108)	+	MamTip2	DNA/hAT-Tip100	62	126	(179)	2096853
23	22.1	2.9	1.4	chr2	127107093	127107162	(115086367)	+	(GAGC)n	Simple_repeat	1	72	(0)	2096882
22351	13.7	1.5	1.0	chr2	127208082	127211361	(114982168)	+	L1PA8A	LINE/L1	2	3306	(3155)	2097060
43	25.2	5.0	3.3	chr2	127407870	127408069	(114785460)	+	(CCTCCT)n	Simple_repeat	1	210	(0)	2097395
21	15.5	5.9	0.0	chr2	127637878	127637928	(114555601)	+	(CTTC)n	Simple_repeat	1	54	(0)	2097756
29	18.9	1.1	5.7	chr2	128027619	128027705	(114165824)	+	(CCGC)n	Simple_repeat	1	88	(0)	2098508
17	10.0	3.1	0.0	chr2	128322219	128322270	(113871259)	+	(GGCCCC)n	Simple_repeat	1	53	(0)	2099035
78	21.8	2.5	1.5	chr2	128664319	128664517	(113529012)	+	(CCTCT)n	Simple_repeat	1	204	(0)	2099546
757	18.4	13.8	1.4	chr2	130391863	130392083	(111801446)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2372	2101762
182	38.1	0.0	1.2	chr2	131017374	131017458	(111176071)	C	L2b	LINE/L2	(1)	3374	3291	2102695
280	24.6	7.6	0.4	chr2	131153920	131154052	(111039477)	+	MER5A	DNA/hAT-Charlie	18	166	(0)	2102931
15	31.9	0.0	2.0	chr2	131154065	131154114	(111039415)	+	(CT)n	Simple_repeat	1	50	(0)	2102932
15	6.9	0.0	8.3	chr2	133266925	133266960	(108926569)	+	(TCCCC)n	Simple_repeat	1	36	(0)	2105704
15	15.2	0.0	5.0	chr2	133267089	133267128	(108926401)	+	GA-rich	Low_complexity	1	40	(0)	2105705
15	18.3	0.0	2.6	chr2	135531567	135531621	(106661908)	+	(CCCGC)n	Simple_repeat	1	53	(0)	2109150
17	15.5	4.7	0.0	chr2	135531859	135531901	(106661628)	+	(GGCTGC)n	Simple_repeat	1	45	(0)	2109151
13	23.3	0.0	0.0	chr2	135532005	135532039	(106661490)	+	(GCT)n	Simple_repeat	1	35	(0)	2109152
395	28.1	8.3	0.0	chr2	135797444	135797564	(106395965)	+	MIR	SINE/MIR	23	154	(108)	2109623
25	22.5	2.5	2.5	chr2	144081606	144081684	(98111845)	+	G-rich	Low_complexity	1	81	(0)	2120903
42	13.6	2.3	2.3	chr2	144520396	144520481	(97673048)	+	(CCTC)n	Simple_repeat	1	88	(0)	2121497
12	4.5	4.0	3.9	chr2	148020984	148021008	(94172521)	+	(TCC)n	Simple_repeat	1	26	(0)	2126016
62	5.8	0.0	0.0	chr2	148021452	148021524	(94172005)	+	(TGC)n	Simple_repeat	1	73	(0)	2126017
22	10.2	4.8	0.0	chr2	148021578	148021619	(94171910)	+	(CTC)n	Simple_repeat	1	44	(0)	2126018
24	13.8	0.0	7.7	chr2	148644625	148644689	(93548840)	+	GA-rich	Low_complexity	1	65	(0)	2126931
433	27.0	8.3	2.8	chr2	148670518	148670734	(93522795)	C	L1MC4a	LINE/L1	(1627)	6255	6026	2126981
1247	18.1	10.5	0.8	chr2	148670736	148670983	(93522546)	C	AluJo	SINE/Alu	(37)	275	1	2126982
17	20.7	2.9	5.6	chr2	148876577	148876645	(93316884)	+	(CCCTCT)n	Simple_repeat	1	71	(0)	2127295
25	19.3	0.0	1.8	chr2	148877720	148877776	(93315753)	+	(CTCCCCC)n	Simple_repeat	1	57	(0)	2127296
22	4.0	0.0	0.0	chr2	150487150	150487175	(91706354)	+	(T)n	Simple_repeat	1	26	(0)	2129422
21	9.5	0.0	0.0	chr2	151409773	151409806	(90783723)	+	(GGGAA)n	Simple_repeat	1	34	(0)	2130857
16	0.0	0.0	0.0	chr2	151765785	151765804	(90427725)	+	(ACC)n	Simple_repeat	1	20	(0)	2131316
1692	24.2	15.0	1.9	chr2	151823471	151824069	(90369460)	C	LTR41	LTR/ERVL	(12)	756	41	2131413
13	14.3	2.3	6.7	chr2	152335727	152335770	(89857759)	+	G-rich	Low_complexity	1	45	(0)	2132280
952	16.7	3.7	3.2	chr2	152445584	152445769	(89747760)	C	MER5A	DNA/hAT-Charlie	(0)	189	3	2132449
8084	9.8	4.4	1.9	chr2	152634452	152635621	(89557908)	C	HSMAR1	DNA/TcMar-Mariner	(68)	1219	6	2132730
13	13.0	0.0	3.6	chr2	152717632	152717659	(89475870)	+	GA-rich	Low_complexity	1	28	(0)	2132825
770	25.9	14.7	1.9	chr2	152925926	152926511	(89267018)	+	LTR50	LTR/ERVL	1	795	(0)	2133163
14	26.7	0.0	0.0	chr2	153479913	153479953	(88713576)	+	(CCCT)n	Simple_repeat	1	41	(0)	2133773
859	12.3	5.2	0.0	chr2	153480020	153480165	(88713364)	+	L1MA6	LINE/L1	6147	6300	(0)	2133774
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
23	28.9	1.2	1.2	chr2	158984665	158984745	(83208784)	+	GA-rich	Low_complexity	1	82	(0)	2140934
246	33.0	9.9	3.9	chr2	158984768	158985127	(83208402)	C	L2	LINE/L2	(337)	3082	2699	2140935
14	22.0	1.5	7.3	chr2	159064883	159064949	(83128580)	+	(CCTTC)n	Simple_repeat	1	68	(0)	2141059
16	14.2	0.0	0.0	chr2	159131503	159131538	(83061991)	+	(CTGCCC)n	Simple_repeat	1	36	(0)	2141164
27	19.3	5.8	2.2	chr2	161238802	161238888	(80954641)	+	(CCCT)n	Simple_repeat	1	92	(0)	2144146
13	20.1	0.0	2.8	chr2	163736893	163736928	(78456601)	+	(CCCT)n	Simple_repeat	1	36	(0)	2147387
3504	16.6	14.2	1.3	chr2	165056044	165056756	(77136773)	+	LTR8B	LTR/ERV1	1	820	(0)	2149165
15	36.5	0.0	1.5	chr2	168456654	168456721	(73736808)	+	(GC)n	Simple_repeat	1	68	(0)	2153585
13	20.4	8.5	1.6	chr2	168467017	168467075	(73726454)	+	(TTTCC)n	Simple_repeat	1	64	(0)	2153599
16	18.9	2.3	2.2	chr2	168521487	168521530	(73671999)	+	GA-rich	Low_complexity	1	45	(0)	2153675
12	16.3	5.7	0.0	chr2	168649737	168649771	(73543758)	+	(TCCTTCC)n	Simple_repeat	1	37	(0)	2153864
13	15.0	3.3	0.0	chr2	169828217	169828248	(72365281)	+	G-rich	Low_complexity	1	33	(0)	2155683
13	18.6	3.7	5.4	chr2	170715346	170715399	(71478130)	+	G-rich	Low_complexity	1	56	(0)	2157104
16	19.1	2.2	2.2	chr2	170816497	170816541	(71376988)	+	G-rich	Low_complexity	1	46	(0)	2157297
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
14	26.1	2.9	4.2	chr2	172084655	172084723	(70108806)	+	GA-rich	Low_complexity	1	71	(0)	2159581
41	23.7	3.7	2.1	chr2	172086006	172086141	(70107388)	+	G-rich	Low_complexity	1	141	(0)	2159582
17	25.8	0.0	3.4	chr2	172099123	172099181	(70094348)	+	G-rich	Low_complexity	1	59	(0)	2159590
193	33.8	17.2	0.7	chr2	172980239	172980533	(69212996)	C	L2b	LINE/L2	(927)	2492	2139	2160969
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
30	27.0	2.1	1.0	chr2	173964409	173964502	(68229027)	+	(GCC)n	Simple_repeat	1	96	(0)	2162457
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
27	27.8	4.9	3.5	chr2	173964826	173964867	(68228662)	+	(CTCCCCT)n	Simple_repeat	4	170	(0)	2162461
12	17.1	2.9	2.8	chr2	173964835	173964869	(68228660)	+	(CGCT)n	Simple_repeat	1	36	(0)	2162462
19	16.5	2.0	3.9	chr2	174332446	174332496	(67861033)	+	G-rich	Low_complexity	1	52	(0)	2163099
300	30.1	20.1	3.1	chr2	174827425	174827905	(67365624)	C	L2	LINE/L2	(374)	3045	2463	2163884
405	29.0	4.3	3.1	chr2	174888547	174888706	(67304823)	+	L1MB2	LINE/L1	245	406	(5907)	2163962
49	2.0	2.0	0.0	chr2	174990214	174990263	(67203266)	+	(GT)n	Simple_repeat	1	51	(0)	2164130
25	35.6	1.0	0.0	chr2	174990264	174990366	(67203163)	+	GA-rich	Low_complexity	1	104	(0)	2164131
17	22.8	0.0	0.0	chr2	176096831	176096866	(66096663)	+	GA-rich	Low_complexity	1	36	(0)	2165659
20	16.4	5.9	4.2	chr2	176106847	176106915	(66086614)	+	(TCC)n	Simple_repeat	1	70	(0)	2165664
15	11.9	0.0	9.1	chr2	176106942	176106985	(66086544)	+	(GCGG)n	Simple_repeat	1	44	(0)	2165665
13	21.9	0.0	7.3	chr2	176106994	176107048	(66086481)	+	(GCGGCCA)n	Simple_repeat	1	55	(0)	2165666
36	22.4	6.3	3.5	chr2	176136222	176136380	(66057149)	+	GA-rich	Low_complexity	1	169	(0)	2165693
14	7.3	0.0	8.6	chr2	176158145	176158179	(66035350)	+	(TTTATT)n	Simple_repeat	1	35	(0)	2165711
27	0.0	0.0	0.0	chr2	176638188	176638216	(65555313)	+	(A)n	Simple_repeat	1	29	(0)	2166429
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
17	0.0	0.0	0.0	chr2	177332417	177332435	(64861094)	+	(A)n	Simple_repeat	1	19	(0)	2167488
427	31.8	6.9	0.7	chr2	178183910	178184058	(64009471)	+	MER115	DNA/hAT-Tip100	26	184	(509)	2168692
847	31.1	4.5	2.6	chr2	178184065	178184328	(64009201)	+	MER115	DNA/hAT-Tip100	310	578	(115)	2168693
213	26.0	2.7	6.4	chr2	178523566	178523643	(63669886)	C	MIR3	SINE/MIR	(7)	201	127	2169226
201	27.8	2.0	0.0	chr2	179842768	179842824	(62350705)	+	L2c	LINE/L2	3028	3085	(290)	2170704
13	16.2	0.0	0.0	chr2	181656652	181656679	(60536850)	+	G-rich	Low_complexity	1	28	(0)	2172979
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
25	26.4	0.0	4.4	chr2	181891943	181891962	(60301567)	+	(CCCTCC)n	Simple_repeat	2	90	(0)	2173263
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
3231	18.4	9.6	3.8	chr2	186780487	186781347	(55412182)	+	L1M3f	LINE/L1	2	913	(4415)	2179556
321	36.0	11.8	0.9	chr2	187500889	187501107	(54692422)	C	L2b	LINE/L2	(23)	3352	3107	2180469
14	14.9	2.4	4.8	chr2	188291953	188291993	(53901536)	+	G-rich	Low_complexity	1	42	(0)	2181474
277	29.1	1.9	11.2	chr2	191217494	191217609	(50975920)	+	MamTip2	DNA/hAT-Tip100	168	272	(33)	2185536
288	29.1	7.6	3.5	chr2	191217789	191217902	(50975627)	+	L2c	LINE/L2	3268	3386	(1)	2185537
17	25.1	5.6	0.0	chr2	191571327	191571380	(50622149)	+	(TC)n	Simple_repeat	1	57	(0)	2186072
22	13.4	3.9	1.9	chr2	191571383	191571433	(50622096)	+	(TTGTT)n	Simple_repeat	1	53	(0)	2186073
15	0.0	3.9	3.7	chr2	191678790	191678815	(50514714)	+	(CTCCC)n	Simple_repeat	1	27	(0)	2186264
4619	15.4	3.6	3.0	chr2	197090563	197091411	(45102118)	+	LTR1D	LTR/ERV1	1	975	(0)	2193365
484	30.4	9.7	7.9	chr2	197311651	197312004	(44881525)	C	L2b	LINE/L2	(0)	3375	3015	2193756
857	7.7	0.8	13.6	chr2	197435318	197435472	(44758057)	+	FRAM	SINE/Alu	22	156	(20)	2194005
19	21.4	5.1	3.7	chr2	198372913	198372990	(43820539)	+	(TCTCTCT)n	Simple_repeat	1	82	(0)	2195447
447	34.0	11.5	0.6	chr2	199278014	199278298	(42915231)	C	L2a	LINE/L2	(97)	3290	2977	2196623
13	7.6	0.0	8.8	chr2	199457449	199457482	(42736047)	+	(CTTCCC)n	Simple_repeat	1	34	(0)	2196844
17	7.1	3.1	3.0	chr2	199457555	199457586	(42735943)	+	(GGA)n	Simple_repeat	1	33	(0)	2196845
14	11.8	7.7	2.4	chr2	199457621	199457659	(42735870)	+	GA-rich	Low_complexity	1	42	(0)	2196846
17	13.3	0.0	2.9	chr2	199457723	199457757	(42735772)	+	(CGG)n	Simple_repeat	1	35	(0)	2196847
14	24.0	6.1	1.4	chr2	199458317	199458382	(42735147)	+	GA-rich	Low_complexity	1	70	(0)	2196848
12	4.2	0.0	10.0	chr2	200963841	200963870	(41229659)	+	(CCTTT)n	Simple_repeat	1	30	(0)	2199238
2587	6.2	0.3	0.0	chr2	200963976	200964283	(41229246)	+	AluSp	SINE/Alu	1	309	(4)	2199239
306	29.9	3.3	2.5	chr2	200966993	200967112	(41226417)	+	HAL1	LINE/L1	559	679	(1828)	2199245
13	20.8	0.0	0.0	chr2	203328209	203328241	(38865288)	+	G-rich	Low_complexity	1	33	(0)	2203790
509	30.2	9.8	1.6	chr2	203533295	203533536	(38659993)	C	Tigger19b	DNA/TcMar-Tigger	(30)	520	257	2204162
249	33.4	5.5	1.1	chr2	203533540	203533715	(38659814)	+	L2b	LINE/L2	3063	3258	(129)	2204163
13	26.1	0.0	6.5	chr2	204551535	204551596	(37641933)	+	(CTCTCC)n	Simple_repeat	1	62	(0)	2205795
20	17.6	2.2	0.0	chr2	207163398	207163442	(35030087)	+	GA-rich	Low_complexity	1	46	(0)	2209616
15	27.2	0.0	0.0	chr2	207166071	207166112	(35027417)	+	(TCC)n	Simple_repeat	1	42	(0)	2209619
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
1187	9.4	0.6	2.4	chr2	207626385	207626587	(34566942)	C	AluSx	SINE/Alu	(0)	312	127	2210338
14	13.2	2.9	2.8	chr2	209771905	209771939	(32421590)	+	G-rich	Low_complexity	1	36	(0)	2213450
245	29.7	9.9	1.7	chr2	210477360	210477479	(31716050)	C	L3b	LINE/CR1	(134)	5098	4968	2214396
20	28.0	1.7	0.0	chr2	212536183	212536242	(29657287)	+	(AC)n	Simple_repeat	1	61	(0)	2217075
41	2.4	0.0	0.0	chr2	213150456	213150497	(29043032)	+	(CCT)n	Simple_repeat	1	42	(0)	2217866
18	22.2	1.9	1.8	chr2	213151960	213152018	(29041511)	+	(CGCC)n	Simple_repeat	1	59	(0)	2217872
26	13.2	3.9	0.0	chr2	216603337	216603387	(25590142)	+	GA-rich	Low_complexity	1	53	(0)	2223085
487	16.2	3.5	13.0	chr2	216603475	216603666	(25589863)	C	MER112	DNA/hAT-Charlie	(0)	261	89	2223086
28	18.0	3.3	8.7	chr2	216633464	216633593	(25559936)	+	(CCG)n	Simple_repeat	1	122	(0)	2223158
15	19.9	0.0	0.0	chr2	216692009	216692037	(25501492)	+	(CT)n	Simple_repeat	1	29	(0)	2223255
257	38.0	7.6	2.7	chr2	217996434	217996871	(24196658)	+	L2b	LINE/L2	2418	2878	(541)	2225302
227	22.1	18.1	0.0	chr2	218287171	218287238	(23906291)	C	MIR3	SINE/MIR	(14)	194	112	2225773
2113	12.2	0.0	0.7	chr2	218287428	218287721	(23905808)	+	AluSc8	SINE/Alu	1	292	(19)	2225774
13	26.4	4.0	0.0	chr2	218324087	218324136	(23869393)	+	(CCCT)n	Simple_repeat	1	52	(0)	2225873
2109	15.2	1.3	0.0	chr2	218466734	218467030	(23726499)	C	AluSx	SINE/Alu	(11)	301	1	2226188
1889	8.6	5.8	3.9	chr2	218467199	218467315	(23726214)	C	AluSx1	SINE/Alu	(51)	261	137	2226189
1938	12.8	5.2	3.6	chr2	218852634	218852939	(23340590)	C	AluSz6	SINE/Alu	(1)	311	1	2226927
16	4.1	8.0	0.0	chr2	218853073	218853097	(23340432)	+	(GT)n	Simple_repeat	1	27	(0)	2226928
13	18.0	0.0	7.0	chr2	218886460	218886502	(23307027)	+	(TCCCC)n	Simple_repeat	1	43	(0)	2226975
12	22.1	0.0	0.0	chr2	219176901	219176932	(23016597)	+	(TGCC)n	Simple_repeat	1	32	(0)	2227457
14	16.4	2.9	0.0	chr2	219176946	219176979	(23016550)	+	(CGCCCT)n	Simple_repeat	1	35	(0)	2227458
471	31.2	7.0	11.4	chr2	219277556	219278123	(22915406)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	22	2227636
387	37.6	4.1	3.5	chr2	219278767	219279080	(22914449)	C	L2c	LINE/L2	(0)	3387	3072	2227637
26	8.2	7.3	1.7	chr2	219280144	219280198	(22913331)	+	(TCC)n	Simple_repeat	1	59	(0)	2227638
77	30.7	4.1	1.9	chr2	219294198	219294561	(22898968)	+	GA-rich	Low_complexity	1	379	(0)	2227661
11	19.1	5.9	3.7	chr2	219294717	219294767	(22898762)	+	G-rich	Low_complexity	1	54	(0)	2227662
12	12.6	2.5	7.3	chr2	219294869	219294908	(22898621)	+	(AGGCCC)n	Simple_repeat	1	41	(0)	2227663
14	8.9	7.9	2.4	chr2	219460655	219460692	(22732837)	+	(CTCCCC)n	Simple_repeat	1	41	(0)	2227982
13	20.8	4.3	2.1	chr2	219486494	219486539	(22706990)	+	GA-rich	Low_complexity	1	48	(0)	2228019
411	30.3	17.1	3.3	chr2	219530435	219531066	(22662463)	C	L2a	LINE/L2	(38)	3388	2621	2228085
13	11.8	7.7	2.4	chr2	219538288	219538326	(22655203)	+	GA-rich	Low_complexity	1	42	(0)	2228098
14	0.0	0.0	0.0	chr2	219571417	219571434	(22622095)	+	(GCG)n	Simple_repeat	1	18	(0)	2228143
56	12.4	0.0	0.0	chr2	219571954	219572050	(22621479)	+	(TG)n	Simple_repeat	1	97	(0)	2228145
46	2.3	0.0	0.0	chr2	219576715	219576758	(22616771)	+	(GT)n	Simple_repeat	1	44	(0)	2228153
346	33.2	10.3	10.3	chr2	219595281	219595532	(22597997)	C	MLT1O	LTR/ERVL-MaLR	(0)	542	291	2228193
1718	15.7	2.6	1.6	chr2	219685183	219685512	(22508017)	+	MER61B	LTR/ERV1	1	427	(0)	2228329
286	34.5	0.0	2.5	chr2	219728850	219728971	(22464558)	C	MIR3	SINE/MIR	(70)	138	20	2228394
12	25.2	2.0	3.9	chr2	222320012	222320062	(19873467)	+	(GCT)n	Simple_repeat	1	52	(0)	2232407
16	18.9	2.9	7.0	chr2	222320227	222320295	(19873234)	+	(CGTCCC)n	Simple_repeat	1	71	(0)	2232408
2279	11.7	1.6	0.0	chr2	222432740	222433046	(19760483)	+	AluSp	SINE/Alu	1	312	(1)	2232596
28	13.1	0.0	1.9	chr2	222433063	222433115	(19760414)	+	(GAGGG)n	Simple_repeat	1	53	(0)	2232597
315	27.8	10.0	0.8	chr2	222442717	222442843	(19750686)	C	Tigger19b	DNA/TcMar-Tigger	(92)	458	319	2232607
833	19.6	0.0	0.0	chr2	223726449	223726581	(18466948)	+	FLAM_C	SINE/Alu	1	133	(10)	2234723
31	16.1	0.0	0.0	chr2	223726583	223726640	(18466889)	+	GA-rich	Low_complexity	1	58	(0)	2234724
41	0.0	0.0	0.0	chr2	223726642	223726679	(18466850)	+	(GGGGA)n	Simple_repeat	1	38	(0)	2234725
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
331	31.8	7.8	2.6	chr2	224037003	224037196	(18156333)	+	L2a	LINE/L2	3219	3423	(3)	2235308
12	37.2	2.7	1.3	chr2	224319273	224319347	(17874182)	+	A-rich	Low_complexity	1	77	(0)	2235718
679	20.0	0.0	3.0	chr2	224319371	224319504	(17874025)	+	MER45C	DNA/hAT-Tip100	1	130	(823)	2235719
2419	18.3	5.0	3.4	chr2	224359380	224359906	(17833623)	+	MER74A	LTR/ERVL	1	536	(22)	2235784
14	18.3	4.9	2.3	chr2	224576689	224576741	(17616788)	+	GA-rich	Low_complexity	1	54	(0)	2236154
264	27.8	7.9	3.6	chr2	224576767	224576960	(17616569)	C	MARNA	DNA/TcMar-Mariner	(45)	541	339	2236155
219	31.0	6.5	1.0	chr2	224584272	224584372	(17609157)	+	AmnSINE1	SINE/5S-Deu-L2	445	551	(24)	2236168
13	5.3	0.0	0.0	chr2	224585308	224585327	(17608202)	+	(GGC)n	Simple_repeat	1	20	(0)	2236170
22	9.4	0.0	0.0	chr2	224585356	224585389	(17608140)	+	(TCC)n	Simple_repeat	1	34	(0)	2236171
25	20.4	0.0	6.1	chr2	224585412	224585493	(17608036)	+	G-rich	Low_complexity	1	82	(0)	2236172
14	10.8	2.0	10.0	chr2	224585798	224585846	(17607683)	+	G-rich	Low_complexity	1	50	(0)	2236173
22	3.0	2.8	2.7	chr2	226792122	226792157	(15401372)	+	(TCTTTT)n	Simple_repeat	1	37	(0)	2239461
20	3.3	3.0	2.9	chr2	226799648	226799680	(15393849)	+	(CTC)n	Simple_repeat	1	34	(0)	2239468
317	30.7	14.9	6.8	chr2	227164586	227164910	(15028619)	+	L1M4b	LINE/L1	317	672	(6195)	2240010
3334	13.4	5.6	2.9	chr2	227207415	227208006	(14985523)	C	LTR36	LTR/ERV1	(1)	610	2	2240074
945	23.4	5.2	4.0	chr2	231117998	231118246	(11075283)	+	MIR	SINE/MIR	11	262	(0)	2246243
362	31.9	6.0	0.7	chr2	231118254	231118395	(11075134)	C	L4_C_Mam	LINE/RTE-X	(1274)	3864	3715	2246244
37	20.0	4.1	0.0	chr2	231604662	231604758	(10588771)	+	(CCGGC)n	Simple_repeat	1	101	(0)	2247244
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
23	23.6	2.3	8.3	chr2	231684911	231685040	(10508489)	+	GA-rich	Low_complexity	1	133	(0)	2247434
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
340	31.9	7.3	5.0	chr2	231926618	231926858	(10266671)	C	MIRb	SINE/MIR	(7)	261	15	2247912
505	18.0	0.0	0.0	chr2	232683615	232683703	(9509826)	+	L1MC2	LINE/L1	5607	5695	(649)	2249121
929	21.6	0.0	0.0	chr2	232683706	232683876	(9509653)	C	AluJb	SINE/Alu	(5)	307	137	2249122
15	18.4	4.7	0.0	chr2	232697258	232697300	(9496229)	+	G-rich	Low_complexity	1	45	(0)	2249158
55	0.0	0.0	0.0	chr2	232988037	232988083	(9205446)	+	(GT)n	Simple_repeat	1	47	(0)	2249674
1274	28.5	4.6	12.1	chr2	232988308	232989165	(9204364)	+	L1ME4b	LINE/L1	67	855	(37)	2249675
246	24.4	5.5	3.2	chr2	233557403	233557525	(8636004)	C	MamRep434	DNA/TcMar-Tigger	(52)	374	249	2250665
183	29.3	19.1	2.4	chr2	233557578	233557867	(8635662)	C	L2	LINE/L2	(1174)	2245	1886	2250666
258	34.5	3.1	5.0	chr2	234155955	234156213	(8037316)	+	L1M6	LINE/L1	38	291	(6205)	2251459
14	24.6	0.0	0.0	chr2	234156223	234156258	(8037271)	+	(TTC)n	Simple_repeat	1	36	(0)	2251460
245	25.0	3.6	5.9	chr2	234156267	234156351	(8037178)	+	L1M6	LINE/L1	296	378	(6118)	2251459
1314	19.1	11.7	4.8	chr2	234156471	234156883	(8036646)	+	LTR56	LTR/ERV1	1	445	(0)	2251461
183	30.7	3.3	5.4	chr2	234964392	234964484	(7229045)	C	L2c	LINE/L2	(25)	3362	3272	2252845
1638	17.4	4.0	5.5	chr2	235559667	235560191	(6633338)	C	L1M4	LINE/L1	(712)	5466	4942	2253810
17	9.4	2.8	2.7	chr2	235560296	235560331	(6633198)	+	(TTTC)n	Simple_repeat	1	37	(0)	2253811
20	17.1	1.7	5.1	chr2	235560330	235560387	(6633142)	+	(TCCC)n	Simple_repeat	1	59	(0)	2253812
1437	23.4	11.8	1.8	chr2	235560393	235560835	(6632694)	+	MLT1D	LTR/ERVL-MaLR	1	493	(12)	2253813
13	22.9	2.1	4.2	chr2	237291388	237291434	(4902095)	+	(TTCTC)n	Simple_repeat	1	48	(0)	2256186
27	13.7	3.5	1.7	chr2	237414207	237414264	(4779265)	+	(TCC)n	Simple_repeat	1	60	(0)	2256311
283	27.4	6.7	0.0	chr2	237723840	237723923	(4469606)	C	L2b	LINE/L2	(25)	3350	3261	2256774
253	35.5	4.9	4.6	chr2	237921791	237922053	(4271476)	C	Tigger16a	DNA/TcMar-Tigger	(122)	835	572	2257051
3339	19.8	5.0	0.1	chr2	238808687	238809413	(3384116)	C	L1MDa	LINE/L1	(4536)	2097	1334	2258262
13	9.3	0.0	0.0	chr2	239399391	239399413	(2794116)	+	(CTCC)n	Simple_repeat	1	23	(0)	2258866
12	25.9	1.9	3.6	chr2	240251814	240251825	(1941704)	+	(CTCC)n	Simple_repeat	1	51	(0)	2259856
13	17.8	5.3	0.0	chr2	240251826	240251863	(1941666)	+	(TCCCGC)n	Simple_repeat	1	40	(0)	2259857
243	32.2	3.2	0.0	chr2	240916845	240916934	(1276595)	+	MIR3	SINE/MIR	90	182	(26)	2260513
13	12.5	0.0	0.0	chr2	240962484	240962509	(1231020)	+	(GGGAG)n	Simple_repeat	1	26	(0)	2260547
204	20.2	13.3	0.9	chr2	241009697	241009812	(1183717)	+	L2c	LINE/L2	3119	3250	(125)	2260576
4076	18.2	5.9	2.1	chr2	241078412	241078820	(1114709)	+	L1MB7	LINE/L1	5768	6184	(0)	2260650
1226	27.8	3.6	1.2	chr2	241546708	241547118	(646411)	+	MLT1C	LTR/ERVL-MaLR	12	432	(35)	2261325
15	3.8	3.2	6.2	chr2	241547135	241547165	(646364)	+	(GGA)n	Simple_repeat	1	32	(0)	2261326
31	11.2	0.0	0.0	chr2	241776390	241776438	(417091)	+	(AGG)n	Simple_repeat	1	49	(0)	2261697
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
14	21.9	2.3	2.2	chr20	325829	325872	(64118295)	+	(GCC)n	Simple_repeat	1	45	(0)	2262666
51	0.0	0.0	0.0	chr20	348485	348528	(64095639)	+	(GT)n	Simple_repeat	1	44	(0)	2262726
395	12.8	14.0	0.0	chr20	536429	536514	(63907653)	C	MIR	SINE/MIR	(75)	187	88	2263136
208	29.3	3.9	1.3	chr20	536509	536584	(63907583)	C	MIRb	SINE/MIR	(98)	170	93	2263137
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
16	14.2	0.0	0.0	chr20	653539	653569	(63790598)	+	(GCGGGG)n	Simple_repeat	1	31	(0)	2263437
465	26.1	6.8	0.0	chr20	664997	665134	(63779033)	C	MIR	SINE/MIR	(4)	258	111	2263461
308	23.2	12.6	10.7	chr20	665173	665312	(63778855)	+	L2c	LINE/L2	3245	3387	(0)	2263462
38	13.9	1.1	5.5	chr20	672717	672806	(63771361)	+	(CCCT)n	Simple_repeat	1	91	(0)	2263479
12	29.9	0.0	2.1	chr20	711874	711921	(63732246)	+	(CCTT)n	Simple_repeat	1	48	(0)	2263574
13	27.3	3.4	1.6	chr20	728423	728481	(63715686)	+	(GGCGC)n	Simple_repeat	1	61	(0)	2263618
258	28.1	0.0	0.9	chr20	833352	833435	(63610732)	C	MIR3	SINE/MIR	(149)	119	40	2263836
504	25.2	4.0	7.4	chr20	881420	881650	(63562517)	C	L2b	LINE/L2	(222)	3153	2931	2263951
21	12.4	3.5	5.0	chr20	1185780	1185837	(63258330)	+	(CTCCCCA)n	Simple_repeat	1	60	(0)	2264565
295	30.2	8.6	2.9	chr20	1186064	1186271	(63257896)	+	L2c	LINE/L2	3106	3326	(61)	2264566
16	20.0	0.0	5.9	chr20	1226602	1226652	(63217515)	+	(CCCT)n	Simple_repeat	1	51	(0)	2264648
12	18.3	5.4	0.0	chr20	1266254	1266290	(63177877)	+	(CCCT)n	Simple_repeat	1	39	(0)	2264709
291	26.6	7.1	4.7	chr20	1313744	1313893	(63130274)	C	Tigger18a	DNA/TcMar-Tigger	(1)	851	698	2264790
13	25.1	0.0	2.3	chr20	1368882	1368925	(63075242)	+	(CATCCC)n	Simple_repeat	1	44	(0)	2264888
21	22.0	5.6	5.3	chr20	1391731	1391838	(63052329)	+	GA-rich	Low_complexity	1	114	(0)	2264921
907	15.8	0.0	2.0	chr20	2599592	2599740	(61844427)	C	AluJb	SINE/Alu	(165)	147	2	2267257
12	16.6	4.5	4.3	chr20	2693353	2693396	(61750771)	+	(CCGC)n	Simple_repeat	1	46	(0)	2267442
13	8.7	0.0	3.7	chr20	2748679	2748705	(61695462)	+	(GGAGG)n	Simple_repeat	1	27	(0)	2267527
491	24.4	15.0	0.0	chr20	2870442	2870634	(61573533)	+	L2a	LINE/L2	3198	3424	(2)	2267728
270	21.9	3.2	0.0	chr20	2870624	2870697	(61573470)	C	MIR1_Amn	SINE/MIR	(96)	172	95	2267729
206	15.2	0.0	0.0	chr20	2873164	2873196	(61570971)	+	MIRc	SINE/MIR	121	153	(115)	2267730
245	33.8	3.8	9.5	chr20	2874689	2874940	(61569227)	+	L2	LINE/L2	2800	3036	(383)	2267734
13	22.8	0.0	0.0	chr20	3038543	3038578	(61405589)	+	(CCCTCCC)n	Simple_repeat	1	36	(0)	2268069
24	24.7	1.4	1.4	chr20	3112122	3112192	(61331975)	+	G-rich	Low_complexity	1	72	(0)	2268229
12	13.7	6.2	0.0	chr20	3680631	3680662	(60763505)	+	G-rich	Low_complexity	1	34	(0)	2269300
621	31.4	2.5	4.3	chr20	3727063	3727385	(60716782)	C	LTR103_Mam	LTR/ERV1?	(111)	364	48	2269389
407	27.5	2.4	3.6	chr20	3727427	3727592	(60716575)	+	L2c	LINE/L2	2254	2417	(1002)	2269390
32	25.8	1.8	2.6	chr20	3796343	3796453	(60647714)	+	(TCCC)n	Simple_repeat	1	113	(0)	2269517
217	27.8	6.7	3.0	chr20	3846434	3846533	(60597634)	C	L2c	LINE/L2	(11)	3376	3273	2269630
1570	27.0	6.8	5.0	chr20	3873829	3874352	(60569815)	+	L1ME3A	LINE/L1	5555	6092	(81)	2269687
1286	20.1	27.6	3.1	chr20	3874374	3874819	(60569348)	C	MER89	LTR/ERV1	(0)	559	3	2269690
14	20.2	1.7	6.8	chr20	4172526	4172583	(60271584)	+	GA-rich	Low_complexity	1	59	(0)	2270293
18	13.7	2.4	2.3	chr20	4823488	4823529	(59620638)	+	(CCCT)n	Simple_repeat	1	43	(0)	2271388
12	22.8	4.8	0.0	chr20	4823639	4823680	(59620487)	+	(CCTCC)n	Simple_repeat	1	44	(0)	2271389
196	30.2	21.3	1.8	chr20	4924411	4924636	(59519531)	+	L2a	LINE/L2	2643	2924	(495)	2271566
753	19.5	6.1	8.7	chr20	5155552	5155804	(59288363)	C	MLT1D	LTR/ERVL-MaLR	(256)	249	4	2272143
21714	13.5	1.6	1.2	chr20	8382847	8385971	(56058196)	C	L1PA8A	LINE/L1	(3305)	3156	2	2277168
15	11.6	0.0	3.3	chr20	9067826	9067855	(55376312)	+	(GGA)n	Simple_repeat	1	30	(0)	2278344
14	10.6	0.0	5.9	chr20	9839123	9839156	(54605011)	+	(GGAGCA)n	Simple_repeat	1	34	(0)	2279557
233	32.3	7.2	5.5	chr20	10517750	10517913	(53926254)	+	MIR3	SINE/MIR	36	202	(6)	2280681
1271	11.5	2.4	1.0	chr20	10517985	10518186	(53925981)	+	L1PA11	LINE/L1	5969	6173	(1)	2280682
12998	13.7	1.5	1.5	chr20	11379234	11383682	(53060485)	+	L1PA10	LINE/L1	1	4453	(2008)	2281911
27	19.4	4.0	1.3	chr20	13199337	13199410	(51244757)	+	(TTCC)n	Simple_repeat	1	77	(0)	2284524
27	23.3	6.8	2.8	chr20	17569455	17569586	(46874581)	+	(CCCTCA)n	Simple_repeat	1	141	(0)	2291130
1658	14.1	8.5	0.0	chr20	18506893	18507183	(45936984)	+	L1PA16	LINE/L1	5827	6144	(22)	2292787
303	20.5	9.3	0.0	chr20	18507204	18507281	(45936886)	+	LTR37-int	LTR/ERV1	1438	1523	(2537)	2292784
830	26.2	8.2	1.1	chr20	18917732	18918013	(45526154)	+	L2a	LINE/L2	2649	2952	(467)	2293424
42	7.7	6.7	3.2	chr20	19758154	19758242	(44685925)	+	(CCT)n	Simple_repeat	1	95	(0)	2294579
27	3.5	0.0	0.0	chr20	20011093	20011122	(44433045)	+	(TCCT)n	Simple_repeat	1	30	(0)	2295040
252	18.9	1.9	0.0	chr20	20011149	20011201	(44432966)	C	HAL1	LINE/L1	(155)	2352	2299	2295041
614	14.1	0.0	0.0	chr20	20011202	20011286	(44432881)	C	AluYj4	SINE/Alu	(0)	311	227	2295042
13	26.0	3.9	1.9	chr20	20011287	20011300	(44432867)	+	(TTCCT)n	Simple_repeat	1	30	(23)	2295043
14	16.1	0.0	0.0	chr20	20011301	20011329	(44432838)	+	(CTCCC)n	Simple_repeat	1	29	(0)	2295044
13	26.0	3.9	1.9	chr20	20011330	20011337	(44432830)	+	(TTCCT)n	Simple_repeat	31	53	(0)	2295043
1395	13.7	8.2	2.3	chr20	20011347	20011473	(44432694)	C	AluJo	SINE/Alu	(53)	259	120	2295045
332	33.9	7.1	2.8	chr20	20212808	20213065	(44231102)	C	L2a	LINE/L2	(2)	3424	3111	2295339
557	29.2	13.3	3.9	chr20	20692518	20692953	(43751214)	+	MLT1L	LTR/ERVL-MaLR	105	585	(10)	2295917
32	23.7	2.2	1.1	chr20	21514118	21514206	(42929961)	+	G-rich	Low_complexity	1	91	(0)	2297203
18	12.3	3.1	9.1	chr20	22584365	22584428	(41859739)	+	(CCCT)n	Simple_repeat	1	66	(0)	2298601
12	21.2	6.2	4.3	chr20	22584428	22584492	(41859675)	+	G-rich	Low_complexity	1	69	(0)	2298602
473	17.6	3.6	7.7	chr20	23499828	23499944	(40944223)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	321	2299798
20	15.9	0.0	0.0	chr20	23499956	23499990	(40944177)	+	GA-rich	Low_complexity	1	35	(0)	2299799
956	18.8	11.4	1.0	chr20	23500001	23500262	(40943905)	C	MSTB	LTR/ERVL-MaLR	(158)	307	1	2299800
113	31.0	3.1	4.4	chr20	23638051	23638751	(40805416)	+	(CCCTC)n	Simple_repeat	1	723	(0)	2299953
18	12.6	0.0	0.0	chr20	24471603	24471629	(39972538)	+	(A)n	Simple_repeat	1	27	(0)	2300954
314	23.5	2.3	3.4	chr20	24471644	24471731	(39972436)	C	L1MC5a	LINE/L1	(3)	2774	2688	2300955
1813	13.3	4.6	2.0	chr20	30500707	30501000	(33943167)	C	AluSx1	SINE/Alu	(10)	302	1	2305060
14	11.6	3.6	0.0	chr20	31675922	31675949	(32768218)	+	(CCT)n	Simple_repeat	1	29	(0)	2306601
12	18.1	3.1	0.0	chr20	31836254	31836285	(32607882)	+	(CCTG)n	Simple_repeat	1	33	(0)	2306987
323	18.8	13.5	0.0	chr20	31836448	31836543	(32607624)	C	MIR3	SINE/MIR	(72)	136	26	2306988
199	27.9	4.8	9.2	chr20	31836542	31836628	(32607539)	+	MIRc	SINE/MIR	121	203	(65)	2306989
223	29.4	0.0	1.4	chr20	31846807	31846875	(32597292)	+	MIRb	SINE/MIR	120	187	(81)	2307005
2411	6.7	0.7	0.7	chr20	31852529	31852827	(32591340)	+	AluSq2	SINE/Alu	1	299	(14)	2307013
504	29.6	0.0	0.7	chr20	31863607	31863752	(32580415)	C	MIRb	SINE/MIR	(60)	208	64	2307042
183	20.0	7.0	0.0	chr20	31863768	31863807	(32580360)	C	MamTip2	DNA/hAT-Tip100	(174)	131	89	2307043
12	16.5	0.0	0.0	chr20	32155194	32155220	(32288947)	+	(CCTCC)n	Simple_repeat	1	27	(0)	2307796
12	23.1	0.0	4.5	chr20	32155345	32155388	(32288779)	+	(CCCTG)n	Simple_repeat	1	44	(0)	2307797
645	28.4	1.6	4.5	chr20	32271031	32271044	(32173123)	C	MIRb	SINE/MIR	(47)	221	208	2308069
1752	17.9	3.2	0.0	chr20	32271045	32271359	(32172808)	C	AluJb	SINE/Alu	(0)	312	1	2308070
728	22.9	8.4	18.2	chr20	32298526	32298691	(32145476)	C	L1ME3Cz	LINE/L1	(123)	874	746	2308145
1215	20.2	8.4	2.2	chr20	32298692	32298958	(32145209)	C	AluJr	SINE/Alu	(23)	289	5	2308146
365	32.6	6.1	7.3	chr20	32336846	32337037	(32107130)	C	L2a	LINE/L2	(207)	3219	3035	2308239
44	0.0	0.0	0.0	chr20	32476199	32476236	(31967931)	+	(AC)n	Simple_repeat	1	38	(0)	2308501
46	27.1	2.6	6.6	chr20	32483590	32483856	(31960311)	+	GA-rich	Low_complexity	1	274	(0)	2308513
151	21.0	2.6	4.2	chr20	32562881	32563340	(31880827)	+	GA-rich	Low_complexity	1	472	(0)	2308683
206	26.7	0.0	0.0	chr20	32563345	32563389	(31880778)	C	L2b	LINE/L2	(17)	3358	3314	2308684
460	24.0	9.3	2.4	chr20	32743631	32743826	(31700341)	+	MIRb	SINE/MIR	46	267	(1)	2309172
17	7.8	0.0	0.0	chr20	32761822	32761848	(31682319)	+	(TCCCC)n	Simple_repeat	1	27	(0)	2309234
187	17.8	12.3	6.1	chr20	32776796	32776909	(31667258)	C	L2b	LINE/L2	(230)	3145	3024	2309272
292	28.0	11.6	0.0	chr20	32823129	32823235	(31620932)	+	MIR3	SINE/MIR	88	208	(0)	2309354
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
17	18.9	2.5	2.4	chr20	33562324	33562385	(30881782)	+	GA-rich	Low_complexity	1	62	(0)	2311081
311	30.9	11.3	0.0	chr20	33674701	33674826	(30769341)	+	MIR	SINE/MIR	102	243	(19)	2311315
376	31.4	17.3	0.8	chr20	33674895	33675282	(30768885)	+	L2c	LINE/L2	2742	3209	(178)	2311316
380	27.4	0.9	3.4	chr20	33859739	33859855	(30584312)	C	MIRb	SINE/MIR	(64)	204	91	2311771
12	29.6	2.0	0.0	chr20	33922340	33922389	(30521778)	+	(CCTTCT)n	Simple_repeat	1	51	(0)	2311917
25	12.7	2.9	5.7	chr20	33922417	33922484	(30521683)	+	(TTCCC)n	Simple_repeat	1	70	(0)	2311918
3568	23.6	5.9	1.6	chr20	33922547	33922830	(30521337)	C	L2	LINE/L2	(465)	2954	2649	2311919
1437	25.9	14.9	5.1	chr20	34300207	34300554	(30143613)	+	L2	LINE/L2	2686	3080	(339)	2312709
231	20.4	0.0	0.0	chr20	34300555	34300598	(30143569)	+	MIRb	SINE/MIR	209	252	(16)	2312715
367	32.1	9.3	4.4	chr20	34516788	34516992	(29927175)	C	MIR	SINE/MIR	(9)	253	38	2313240
1899	15.5	6.4	0.0	chr20	34595203	34595524	(29848643)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	2313408
2586	18.8	4.6	8.3	chr20	34595525	34595817	(29848350)	+	L1MC4a	LINE/L1	6014	6317	(1565)	2313398
14	13.6	0.0	5.6	chr20	34677094	34677129	(29767038)	+	G-rich	Low_complexity	1	36	(0)	2313590
16	18.8	0.0	4.3	chr20	34709247	34709303	(29734864)	+	(CCCCGC)n	Simple_repeat	1	54	(0)	2313686
24	9.5	4.4	0.0	chr20	34825668	34825712	(29618455)	+	(GGGA)n	Simple_repeat	1	47	(0)	2313908
19	20.7	2.6	6.3	chr20	34842187	34842263	(29601904)	+	A-rich	Low_complexity	1	79	(0)	2313949
60	21.7	3.9	2.7	chr20	34842264	34842347	(29601820)	+	GA-rich	Low_complexity	36	188	(0)	2313948
20	27.8	2.4	1.5	chr20	34842395	34842471	(29601696)	+	GA-rich	Low_complexity	1	77	(0)	2313948
522	28.4	4.5	0.7	chr20	34842472	34842620	(29601547)	+	MIRb	SINE/MIR	24	178	(90)	2313950
19	21.9	3.0	2.9	chr20	34876660	34876726	(29567441)	+	(GGAGCG)n	Simple_repeat	1	69	(0)	2314031
235	28.2	0.2	0.0	chr20	34956053	34956125	(29488042)	C	MIRc	SINE/MIR	(130)	138	62	2314221
194	29.0	4.6	0.0	chr20	34956154	34956215	(29487952)	C	MIR3	SINE/MIR	(114)	94	30	2314221
4081	17.7	3.8	6.0	chr20	35067319	35068042	(29376125)	+	L1MB8	LINE/L1	5477	6178	(0)	2314437
356	29.9	0.0	1.0	chr20	35171639	35171736	(29272431)	+	MIR3	SINE/MIR	43	139	(69)	2314693
15	26.6	0.0	0.0	chr20	35171904	35171948	(29272219)	+	GA-rich	Low_complexity	1	45	(0)	2314694
14	6.0	4.8	9.1	chr20	35171998	35172039	(29272128)	+	(CCT)n	Simple_repeat	1	44	(0)	2314695
191	33.6	1.4	4.7	chr20	35225646	35225795	(29218372)	+	L2a	LINE/L2	3023	3167	(208)	2314816
875	25.2	6.1	4.0	chr20	35227353	35227625	(29216542)	+	L3	LINE/CR1	3712	3990	(109)	2314818
503	28.7	7.6	5.1	chr20	35467793	35467943	(28976224)	+	L2c	LINE/L2	2972	3122	(265)	2315354
1491	26.2	13.7	6.9	chr20	35597182	35597839	(28846328)	+	L2a	LINE/L2	2585	3321	(105)	2315643
16	22.7	2.2	0.0	chr20	35619020	35619065	(28825102)	+	(AGACAC)n	Simple_repeat	1	47	(0)	2315688
2460	21.5	13.0	4.5	chr20	35638299	35639339	(28804828)	+	L1ME2	LINE/L1	5274	6441	(3)	2315729
264	23.1	1.9	0.0	chr20	35910077	35910128	(28534039)	+	MER5B	DNA/hAT-Charlie	13	65	(113)	2316376
1313	14.9	5.3	2.4	chr20	35910129	35910382	(28533785)	+	L1MB5	LINE/L1	5858	6119	(55)	2316377
12	20.7	0.0	2.9	chr20	36085973	36086007	(28358160)	+	G-rich	Low_complexity	1	35	(0)	2316814
32	35.2	1.8	4.1	chr20	36455137	36455354	(27988813)	+	(CCTC)n	Simple_repeat	1	213	(0)	2317666
16	18.9	0.0	0.0	chr20	36462665	36462700	(27981467)	+	G-rich	Low_complexity	1	36	(0)	2317686
209	33.4	8.1	3.1	chr20	36474812	36475008	(27969159)	C	L2b	LINE/L2	(18)	3369	3177	2317714
383	28.7	5.7	2.3	chr20	36571494	36571664	(27872503)	C	L1ME3G	LINE/L1	(420)	504	328	2317919
21	3.3	0.0	3.0	chr20	36574476	36574508	(27869659)	+	(CCCCT)n	Simple_repeat	1	33	(0)	2317922
15	7.8	3.7	0.0	chr20	36835845	36835871	(27608296)	+	(CCG)n	Simple_repeat	1	28	(0)	2318572
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
47	0.0	0.0	0.0	chr20	36947311	36947350	(27496817)	+	(GT)n	Simple_repeat	1	40	(0)	2318862
28	18.4	0.9	9.7	chr20	37345991	37346102	(27098065)	+	(TCC)n	Simple_repeat	1	113	(0)	2319802
12	13.0	11.9	0.0	chr20	37346084	37346125	(27098042)	+	(CTCTCT)n	Simple_repeat	1	47	(0)	2319803
52	5.5	4.0	0.0	chr20	37411710	37411785	(27032382)	+	(TTCCC)n	Simple_repeat	1	79	(0)	2319979
237	29.7	9.8	2.6	chr20	37735093	37735206	(26708961)	C	MIRc	SINE/MIR	(0)	268	146	2320681
224	23.5	0.0	0.0	chr20	37735234	37735284	(26708883)	C	L2b	LINE/L2	(1)	3374	3324	2320682
197	25.6	3.7	4.9	chr20	37735349	37735430	(26708737)	C	L2b	LINE/L2	(473)	2946	2866	2320682
16	0.0	0.0	0.0	chr20	37993113	37993129	(26451038)	+	(T)n	Simple_repeat	1	17	(0)	2321224
13	18.8	0.0	0.0	chr20	38473102	38473132	(25971035)	+	(CCCTC)n	Simple_repeat	1	31	(0)	2322241
20	20.2	8.6	3.0	chr20	38692446	38692538	(25751629)	+	(TTCC)n	Simple_repeat	1	101	(0)	2322668
436	20.4	3.4	7.1	chr20	38715539	38715673	(25728494)	C	MIRc	SINE/MIR	(102)	166	36	2322723
15	33.2	1.2	2.4	chr20	40688903	40688984	(23755183)	+	(CGGAG)n	Simple_repeat	1	83	(0)	2326251
2014	23.8	8.5	0.6	chr20	41058251	41058749	(23385418)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	28	2326978
327	29.7	6.9	9.8	chr20	41058781	41058881	(23385286)	+	L1ME2	LINE/L1	4810	4921	(1225)	2326979
4552	13.8	5.6	2.5	chr20	41212843	41213304	(23230863)	+	L1MB7	LINE/L1	5632	6109	(75)	2327158
304	31.7	8.0	10.3	chr20	41340247	41340489	(23103678)	C	L2b	LINE/L2	(18)	3357	3121	2327403
182	24.0	7.4	0.0	chr20	41475590	41475639	(22968528)	+	MIRc	SINE/MIR	9	62	(206)	2327601
16	26.1	2.4	5.8	chr20	41574114	41574197	(22869970)	+	A-rich	Low_complexity	1	86	(0)	2327733
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
298	29.3	5.7	1.0	chr20	43579663	43579762	(20864405)	+	L2b	LINE/L2	3289	3426	(0)	2331470
56	33.0	1.8	3.9	chr20	43857157	43857431	(20586736)	+	G-rich	Low_complexity	1	280	(0)	2332136
589	22.4	7.9	0.7	chr20	44028514	44028666	(20415501)	C	L2a	LINE/L2	(0)	3426	3262	2332503
455	27.5	9.5	6.0	chr20	44113706	44113937	(20330230)	+	L2c	LINE/L2	3027	3267	(120)	2332667
14	25.6	3.1	3.0	chr20	44247221	44247289	(20196878)	+	(GGCGA)n	Simple_repeat	1	69	(0)	2333007
12	16.9	0.0	0.0	chr20	44442596	44442622	(20001545)	+	(AATG)n	Simple_repeat	1	27	(0)	2333508
218	30.6	6.1	5.3	chr20	44476389	44476502	(19967665)	+	MIRb	SINE/MIR	3	117	(151)	2333614
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
187	29.3	0.0	7.1	chr20	44701243	44701341	(19742826)	+	L2b	LINE/L2	2995	3086	(289)	2334126
376	32.1	10.3	0.0	chr20	44701437	44701601	(19742566)	+	MIR	SINE/MIR	4	187	(75)	2334127
336	31.4	8.1	9.7	chr20	44714279	44714680	(19729487)	+	L2b	LINE/L2	2951	3345	(30)	2334159
240	21.5	15.6	0.0	chr20	44728975	44729039	(19715128)	C	LTR33A	LTR/ERVL	(48)	483	407	2334200
630	29.9	8.1	0.4	chr20	44729068	44729329	(19714838)	C	LTR33A	LTR/ERVL	(161)	359	76	2334200
14	13.9	2.2	6.5	chr20	44885524	44885568	(19558599)	+	(CCCTGC)n	Simple_repeat	1	46	(0)	2334594
11	7.5	6.7	3.1	chr20	45112152	45112181	(19331986)	+	(GTGTGG)n	Simple_repeat	1	32	(0)	2335039
291	12.8	1.1	3.0	chr20	45305334	45305401	(19138766)	C	MIR3	SINE/MIR	(62)	146	82	2335355
15	17.4	2.4	2.4	chr20	45309110	45309150	(19135017)	+	(CTCCC)n	Simple_repeat	1	42	(0)	2335361
271	33.3	5.6	0.8	chr20	45358616	45358733	(19085434)	C	MIRb	SINE/MIR	(14)	254	131	2335480
13	32.3	1.6	0.0	chr20	45935022	45935085	(18509082)	+	(CCTCCG)n	Simple_repeat	1	65	(0)	2336592
18	22.7	3.8	1.8	chr20	45935194	45935246	(18508921)	+	(GC)n	Simple_repeat	1	55	(0)	2336593
571	31.9	3.9	8.3	chr20	45995047	45995419	(18448748)	C	L2c	LINE/L2	(49)	3338	2983	2336736
384	32.1	1.9	4.6	chr20	45995456	45995618	(18448549)	+	L2c	LINE/L2	3251	3424	(2)	2336731
232	28.2	9.0	0.0	chr20	46013858	46013928	(18430239)	C	MER91A	DNA/hAT-Tip100	(3)	193	116	2336782
71	5.6	1.1	0.0	chr20	46022940	46023034	(18421133)	+	(GAG)n	Simple_repeat	1	96	(0)	2336808
249	22.4	1.7	1.7	chr20	46023120	46023178	(18420989)	C	MIR3	SINE/MIR	(37)	171	113	2336809
18	10.9	0.0	8.5	chr20	46130410	46130456	(18313711)	+	G-rich	Low_complexity	1	47	(0)	2336990
199	27.4	1.6	0.0	chr20	46173659	46173720	(18270447)	+	MIRb	SINE/MIR	3	65	(203)	2337097
1006	20.0	1.5	0.0	chr20	46173743	46173937	(18270230)	C	MIR	SINE/MIR	(0)	262	65	2337098
193	30.1	6.4	0.0	chr20	46230858	46230930	(18213237)	C	MIRb	SINE/MIR	(157)	111	34	2337235
297	27.6	11.5	1.6	chr20	46244493	46244617	(18199550)	C	MIRb	SINE/MIR	(4)	264	126	2337271
314	28.6	6.0	3.1	chr20	46325241	46325370	(18118797)	+	L2b	LINE/L2	3227	3360	(15)	2337462
1552	22.0	4.3	3.8	chr20	46325737	46326109	(18118058)	C	LTR16C	LTR/ERVL	(6)	483	109	2337464
25	16.6	2.7	5.2	chr20	46521049	46521123	(17923044)	+	G-rich	Low_complexity	1	77	(0)	2337799
25	19.9	5.6	5.3	chr20	46681386	46681492	(17762675)	+	GA-rich	Low_complexity	1	113	(0)	2338208
2315	14.5	5.5	2.0	chr20	46681628	46682040	(17762127)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2338209
181	36.5	1.2	3.4	chr20	46715728	46715815	(17728352)	C	MIR3	SINE/MIR	(99)	109	24	2338293
249	31.5	0.0	0.0	chr20	46715753	46715825	(17728342)	+	MIR	SINE/MIR	5	77	(185)	2338294
12	12.2	3.7	0.0	chr20	46979500	46979526	(17464641)	+	(TTCCC)n	Simple_repeat	1	28	(0)	2338924
19	15.3	0.0	0.0	chr20	47274982	47275018	(17169149)	+	GA-rich	Low_complexity	1	37	(0)	2339637
15	15.4	2.6	2.6	chr20	47281564	47281601	(17162566)	+	GA-rich	Low_complexity	1	39	(0)	2339649
19	0.0	0.0	0.0	chr20	47355790	47355810	(17088357)	+	(T)n	Simple_repeat	1	21	(0)	2339807
12	13.9	0.0	0.0	chr20	47359222	47359245	(17084922)	+	(CCTC)n	Simple_repeat	1	24	(0)	2339810
517	27.1	5.8	10.9	chr20	47493838	47494088	(16950079)	C	MIR	SINE/MIR	(1)	261	25	2340265
2429	9.0	0.0	1.0	chr20	47505793	47506104	(16938063)	C	AluSz	SINE/Alu	(3)	309	1	2340303
416	27.6	19.1	1.9	chr20	48545177	48545719	(15898448)	+	L2a	LINE/L2	2698	3413	(13)	2342319
11	21.8	5.4	6.4	chr20	48921544	48921617	(15522550)	+	(CCCTTCG)n	Simple_repeat	1	78	(0)	2343219
391	34.4	7.5	4.6	chr20	49180955	49181213	(15262954)	+	MIRb	SINE/MIR	2	268	(0)	2343757
14	29.6	4.8	2.3	chr20	49188169	49188251	(15255916)	+	GA-rich	Low_complexity	1	87	(0)	2343771
22	23.3	1.7	0.0	chr20	49188384	49188443	(15255724)	+	(GCCCCC)n	Simple_repeat	1	61	(0)	2343772
12	26.4	1.9	3.6	chr20	49276989	49277042	(15167125)	+	A-rich	Low_complexity	1	55	(0)	2344003
11	18.1	2.4	4.8	chr20	49483434	49483474	(14960693)	+	(TCCTCC)n	Simple_repeat	1	42	(0)	2344538
63	8.7	0.0	0.0	chr20	49483476	49483562	(14960605)	+	(CTC)n	Simple_repeat	1	87	(0)	2344539
20	0.0	0.0	0.0	chr20	49699368	49699389	(14744778)	+	(A)n	Simple_repeat	1	22	(0)	2345071
2143	18.2	6.6	13.1	chr20	49699487	49699648	(14744519)	C	MER44B	DNA/TcMar-Tigger	(0)	550	396	2345072
21	18.2	0.0	6.3	chr20	49886061	49886123	(14558044)	+	(CCCTC)n	Simple_repeat	1	63	(0)	2345551
14	22.7	1.8	5.2	chr20	50113046	50113102	(14331065)	+	(CCCCGG)n	Simple_repeat	1	58	(0)	2346105
1155	24.5	10.3	6.8	chr20	50126958	50127340	(14316827)	+	L2a	LINE/L2	2923	3338	(88)	2346147
202	27.8	8.4	1.2	chr20	50187880	50187963	(14256204)	+	MIR3	SINE/MIR	75	167	(101)	2346318
1314	23.5	9.5	1.0	chr20	50305983	50306635	(14137532)	C	L2a	LINE/L2	(0)	3426	2713	2346600
12	19.0	2.1	6.1	chr20	50625777	50625824	(13818343)	+	(CCTCTAT)n	Simple_repeat	1	49	(0)	2347311
244	28.7	14.2	8.4	chr20	50628408	50628776	(13815391)	+	L2b	LINE/L2	2977	3370	(5)	2347318
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
14	12.9	0.0	11.3	chr20	50739861	50739913	(13704254)	+	G-rich	Low_complexity	1	53	(0)	2347612
2276	10.2	0.3	0.0	chr20	50744103	50744407	(13699760)	C	AluSp	SINE/Alu	(1)	312	7	2347622
619	30.1	11.2	6.7	chr20	50744408	50745057	(13699110)	+	L2c	LINE/L2	2730	3381	(6)	2347621
38	0.0	0.0	0.0	chr20	50767319	50767351	(13676816)	+	(TC)n	Simple_repeat	1	33	(0)	2347669
30	3.4	0.0	0.0	chr20	50767384	50767413	(13676754)	+	(CA)n	Simple_repeat	1	30	(0)	2347670
487	26.5	5.7	0.7	chr20	50767451	50767628	(13676539)	+	L1ME3Cz	LINE/L1	6	173	(824)	2347671
27	7.9	2.5	0.0	chr20	50818433	50818472	(13625695)	+	(CT)n	Simple_repeat	1	41	(0)	2347820
269	31.8	8.6	2.8	chr20	51015093	51015344	(13428823)	C	L2b	LINE/L2	(656)	2763	2496	2348222
19	11.2	5.1	0.0	chr20	51023134	51023172	(13420995)	+	GA-rich	Low_complexity	1	41	(0)	2348236
196	20.0	0.0	0.0	chr20	51034814	51034853	(13409314)	C	MIRc	SINE/MIR	(122)	146	107	2348262
1011	24.9	12.8	5.1	chr20	51221269	51222061	(13222106)	C	L2a	LINE/L2	(2)	3424	2567	2348686
14	5.0	0.0	0.0	chr20	51541440	51541460	(12902707)	+	(TCC)n	Simple_repeat	1	21	(0)	2349346
317	33.3	6.2	0.0	chr20	51680774	51680908	(12763259)	C	MamRep137	DNA/TcMar-Tigger	(258)	252	109	2349645
234	18.5	8.5	1.8	chr20	51681117	51681171	(12762996)	+	MIRc	SINE/MIR	88	146	(122)	2349646
19	8.3	0.0	0.0	chr20	51889767	51889792	(12554375)	+	(CA)n	Simple_repeat	1	26	(0)	2350178
494	15.6	4.4	2.7	chr20	51889807	51889918	(12554249)	+	MER58B	DNA/hAT-Charlie	85	198	(143)	2350179
77	25.2	4.0	3.2	chr20	52049612	52049742	(12394425)	+	(CCTTCT)n	Simple_repeat	1	136	(0)	2350629
2331	10.5	0.0	0.0	chr20	52049743	52050046	(12394121)	C	AluSz	SINE/Alu	(8)	304	1	2350630
697	26.9	9.0	0.5	chr20	53020845	53021068	(11423099)	+	MIR	SINE/MIR	18	262	(0)	2352639
804	19.9	1.9	0.0	chr20	53021268	53021423	(11422744)	+	MER5A	DNA/hAT-Charlie	31	189	(0)	2352640
55	7.0	0.0	0.0	chr20	53563606	53563681	(10880486)	+	(CTCCC)n	Simple_repeat	1	76	(0)	2353776
2070	13.4	0.0	0.0	chr20	53563688	53563979	(10880188)	C	AluSz6	SINE/Alu	(20)	292	1	2353777
635	27.8	6.0	7.9	chr20	53610070	53610460	(10833707)	+	L1ME4c	LINE/L1	272	654	(176)	2353853
287	25.1	11.0	7.9	chr20	53739065	53739345	(10704822)	C	L1ME4b	LINE/L1	(21)	871	621	2354222
555	28.8	11.7	2.8	chr20	53739436	53739753	(10704414)	C	L1ME4b	LINE/L1	(113)	779	430	2354223
35	21.3	4.1	1.0	chr20	53827702	53827799	(10616368)	+	(TTCC)n	Simple_repeat	1	102	(0)	2354454
703	26.4	3.3	2.9	chr20	53906934	53907175	(10536992)	C	L1MC4	LINE/L1	(424)	7618	7376	2354637
38	27.0	1.1	0.0	chr20	53915271	53915364	(10528803)	+	GA-rich	Low_complexity	1	95	(0)	2354661
15	8.5	0.0	0.0	chr20	53915453	53915477	(10528690)	+	(TTAT)n	Simple_repeat	1	25	(0)	2354662
506	24.6	2.3	1.6	chr20	53919080	53919207	(10524960)	C	MLT1J	LTR/ERVL-MaLR	(288)	224	96	2354668
2148	9.8	2.7	1.0	chr20	53919280	53919574	(10524593)	+	AluSx	SINE/Alu	2	301	(11)	2354669
740	8.7	0.0	0.0	chr20	54148842	54148933	(10295234)	+	AluSc	SINE/Alu	18	109	(200)	2355159
195	33.3	7.7	3.6	chr20	54149015	54149126	(10295041)	+	L2a	LINE/L2	3295	3411	(15)	2355160
710	20.8	6.8	2.2	chr20	56382719	56382900	(8061267)	C	LTR48B	LTR/ERV1	(71)	573	383	2358917
2356	10.2	0.0	0.0	chr20	56388530	56388834	(8055333)	+	AluSq2	SINE/Alu	1	305	(8)	2358924
899	29.4	12.8	3.0	chr20	56388835	56389432	(8054735)	+	L2	LINE/L2	1819	2477	(942)	2358923
385	28.0	2.7	7.9	chr20	57244495	57244680	(7199487)	+	MIRb	SINE/MIR	20	198	(70)	2360828
17	4.3	0.0	0.0	chr20	57266660	57266683	(7177484)	+	(GGA)n	Simple_repeat	1	24	(0)	2360863
188	30.0	8.9	2.5	chr20	57266788	57267022	(7177145)	C	L2c	LINE/L2	(10)	3365	3115	2360864
188	32.4	7.5	1.8	chr20	57391043	57391155	(7053012)	+	L2a	LINE/L2	3266	3385	(41)	2361092
12	17.2	4.9	2.3	chr20	57391207	57391247	(7052920)	+	(TCCGCCC)n	Simple_repeat	1	43	(0)	2361093
15	25.6	6.1	2.3	chr20	57391314	57391395	(7052772)	+	G-rich	Low_complexity	1	87	(0)	2361094
273	29.4	11.4	1.6	chr20	57435515	57435648	(7008519)	C	MIRb	SINE/MIR	(9)	259	105	2361176
24	24.8	1.1	4.5	chr20	57709861	57709948	(6734219)	+	(CGC)n	Simple_repeat	1	89	(0)	2361623
316	34.1	4.5	3.0	chr20	57943615	57943782	(6500385)	+	MIRb	SINE/MIR	7	188	(20)	2362090
210	24.8	15.3	2.9	chr20	57943775	57943987	(6500180)	+	L2a	LINE/L2	2916	3174	(252)	2362091
22	22.1	2.9	2.8	chr20	58421679	58421747	(6022420)	+	GA-rich	Low_complexity	1	71	(0)	2362910
13	31.2	0.0	4.2	chr20	58892524	58892595	(5551572)	+	G-rich	Low_complexity	1	72	(0)	2363592
1071	22.5	6.7	11.9	chr20	59179391	59179879	(5264288)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	2364048
265	34.9	9.1	1.3	chr20	59835049	59835171	(4608996)	+	L2a	LINE/L2	3300	3425	(1)	2365106
20	3.4	0.0	3.1	chr20	60010489	60010520	(4433647)	+	(TCCCC)n	Simple_repeat	1	32	(0)	2365341
802	26.1	5.8	0.0	chr20	60011509	60011719	(4432448)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	2365344
1694	25.5	11.9	5.0	chr20	61436268	61436931	(3007236)	C	MER21C	LTR/ERVL	(94)	844	129	2367376
17	24.5	1.6	3.2	chr20	62122132	62122192	(2321975)	+	(CCGC)n	Simple_repeat	1	62	(0)	2368176
1075	21.3	9.2	19.1	chr20	62253506	62253782	(2190385)	C	MSTD	LTR/ERVL-MaLR	(0)	396	187	2368357
2239	11.4	0.0	1.9	chr20	62253783	62254097	(2190070)	C	AluSq	SINE/Alu	(4)	309	1	2368358
315	29.1	8.2	2.2	chr20	62363256	62363392	(2080775)	+	MIRb	SINE/MIR	46	191	(77)	2368464
15	31.7	0.0	0.0	chr20	62367410	62367464	(2076703)	+	G-rich	Low_complexity	1	55	(0)	2368469
29	0.0	0.0	0.0	chr20	62550498	62550525	(1893642)	+	(CCCTC)n	Simple_repeat	1	28	(0)	2368688
49	0.0	0.0	0.0	chr20	62550723	62550764	(1893403)	+	(TC)n	Simple_repeat	1	42	(0)	2368689
2290	25.6	11.6	1.9	chr20	62601792	62602798	(1841369)	C	L1MEf	LINE/L1	(4767)	1433	316	2368747
544	26.3	16.3	1.7	chr20	62602935	62603232	(1840935)	C	L1MEf	LINE/L1	(5822)	378	29	2368747
2275	9.4	1.0	0.0	chr20	62794891	62795188	(1648979)	+	AluSx1	SINE/Alu	1	301	(11)	2368960
724	24.8	9.3	3.5	chr20	62795189	62795343	(1648824)	C	L1MB7	LINE/L1	(155)	6029	5874	2368959
13	18.4	0.0	0.0	chr20	62822810	62822840	(1621327)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	2368985
13	13.6	2.9	2.9	chr20	62915068	62915101	(1529066)	+	(CTCAGC)n	Simple_repeat	1	35	(0)	2369084
489	18.4	11.2	6.6	chr20	62915195	62915330	(1528837)	+	AluJo	SINE/Alu	3	145	(167)	2369085
12	25.4	1.1	2.2	chr20	62972672	62972736	(1471431)	+	G-rich	Low_complexity	1	64	(0)	2369143
15	13.4	3.0	0.0	chr20	63006809	63006841	(1437326)	+	(GCCGCT)n	Simple_repeat	1	34	(0)	2369181
48	0.0	0.0	0.0	chr20	63056610	63056653	(1387514)	+	(GGGCTGGCG)n	Simple_repeat	1	44	(0)	2369231
2131	16.7	4.7	1.6	chr20	63225103	63225534	(1218633)	C	MER4C	LTR/ERV1	(0)	465	20	2369387
18	14.6	2.6	0.0	chr20	63261678	63261715	(1182452)	+	(CTCT)n	Simple_repeat	1	39	(0)	2369430
12	17.0	7.5	0.0	chr20	63472648	63472687	(971480)	+	(CGGCGC)n	Simple_repeat	1	43	(0)	2369597
113	18.7	6.2	1.8	chr20	63472726	63473047	(971120)	+	GA-rich	Low_complexity	1	342	(0)	2369598
34	22.4	2.7	3.5	chr20	63626742	63626818	(817349)	+	(CGC)n	Simple_repeat	1	104	(10)	2369783
12	12.6	0.0	3.6	chr20	63626819	63626846	(817321)	+	(CCTCC)n	Simple_repeat	1	28	(0)	2369784
34	22.4	2.7	3.5	chr20	63626847	63626852	(817315)	+	(CGC)n	Simple_repeat	105	114	(0)	2369783
20	20.2	7.1	5.9	chr20	63626919	63627045	(817122)	+	(GCCGCGG)n	Simple_repeat	1	136	(0)	2369785
37	22.2	0.9	3.7	chr20	63626986	63627092	(817075)	+	(CGG)n	Simple_repeat	1	108	(0)	2369786
349	36.2	3.8	2.2	chr20	63651623	63651803	(792364)	C	MIRb	SINE/MIR	(21)	247	64	2369847
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
227	33.3	4.0	0.0	chr20	63658709	63658780	(785387)	C	MIRc	SINE/MIR	(109)	159	85	2369859
11	24.1	0.0	0.0	chr20	63740465	63740498	(703669)	+	(GGACGG)n	Simple_repeat	1	34	(0)	2369965
29	0.0	0.0	0.0	chr20	63957820	63957847	(486320)	+	(CTCCC)n	Simple_repeat	1	28	(0)	2370300
12	8.1	3.6	3.5	chr20	64036063	64036090	(408077)	+	G-rich	Low_complexity	1	29	(0)	2370444
16	11.7	0.0	0.0	chr21	15064946	15064973	(31645010)	+	(CGC)n	Simple_repeat	1	28	(0)	2378615
19	13.0	2.2	4.3	chr21	15745016	15745070	(30964913)	+	(CCTCC)n	Simple_repeat	1	53	(0)	2379565
1835	24.0	11.2	6.6	chr21	15745195	15745462	(30964521)	C	L1M5	LINE/L1	(755)	5391	5096	2379566
1046	29.2	12.0	8.2	chr21	25801280	25802192	(20907791)	+	L1MEi	LINE/L1	106	1057	(1223)	2393047
681	14.5	4.0	14.2	chr21	26126603	26126771	(20583212)	+	MER20	DNA/hAT-Charlie	67	217	(2)	2393541
385	25.4	26.8	2.6	chr21	28991945	28992380	(17717603)	C	L2a	LINE/L2	(6)	3420	2818	2397560
18	14.7	4.3	2.0	chr21	31344320	31344366	(15365617)	+	(CCTC)n	Simple_repeat	1	49	(0)	2401151
20	0.0	0.0	0.0	chr21	31398159	31398180	(15311803)	+	(A)n	Simple_repeat	1	22	(0)	2401252
29	0.0	0.0	0.0	chr21	31498987	31499014	(15210969)	+	(GGGAG)n	Simple_repeat	1	28	(0)	2401474
16	10.8	7.1	2.2	chr21	31499015	31499039	(15210944)	+	GA-rich	Low_complexity	17	44	(0)	2401475
239	27.4	13.1	1.9	chr21	31499073	31499180	(15210803)	C	L2c	LINE/L2	(0)	3387	3266	2401476
1574	18.2	6.5	1.0	chr21	31499279	31499569	(15210414)	+	AluJb	SINE/Alu	2	309	(3)	2401477
40	35.8	3.5	0.0	chr21	31503418	31503589	(15206394)	+	GA-rich	Low_complexity	1	178	(0)	2401487
27	0.0	0.0	0.0	chr21	31503590	31503615	(15206368)	+	(GGAGG)n	Simple_repeat	1	26	(0)	2401488
12	21.2	6.8	3.2	chr21	31555950	31556008	(15153975)	+	GA-rich	Low_complexity	1	63	(0)	2401590
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
1744	17.8	2.6	3.2	chr21	31587813	31588126	(15121857)	+	AluJb	SINE/Alu	1	312	(0)	2401661
30	13.4	0.0	4.7	chr21	31588140	31588203	(15121780)	+	G-rich	Low_complexity	1	64	(0)	2401662
451	8.7	1.2	9.1	chr21	31588297	31588384	(15121599)	+	MLT1A0	LTR/ERVL-MaLR	1	81	(284)	2401663
28	20.6	7.3	1.7	chr21	31660030	31660138	(15049845)	+	G-rich	Low_complexity	1	117	(0)	2401851
1002	32.4	7.4	4.2	chr21	31781528	31782366	(14927617)	+	L2b	LINE/L2	2334	3248	(139)	2402074
376	25.5	3.1	0.0	chr21	31798898	31798991	(14910992)	C	MER81	DNA/hAT-Blackjack	(14)	100	4	2402109
12	16.6	4.5	4.3	chr21	31872932	31872975	(14837008)	+	(CTCCGCCA)n	Simple_repeat	1	46	(0)	2402248
397	27.4	5.9	4.6	chr21	32048350	32048567	(14661416)	C	LTR33	LTR/ERVL	(0)	515	295	2402554
611	33.0	10.2	7.8	chr21	32388858	32389596	(14320387)	C	L2b	LINE/L2	(1)	3374	2620	2403105
14	22.1	2.0	3.9	chr21	32727802	32727852	(13982131)	+	(CTCCCG)n	Simple_repeat	1	52	(0)	2403671
6533	7.0	2.4	0.8	chr21	32992029	32993195	(13716788)	C	L1PB1	LINE/L1	(0)	6151	4965	2404119
38	8.0	0.0	0.0	chr21	33070371	33070423	(13639560)	+	(CCT)n	Simple_repeat	1	53	(0)	2404252
39	2.5	0.0	0.0	chr21	33079525	33079565	(13630418)	+	(AAGGG)n	Simple_repeat	1	41	(0)	2404265
15	19.2	1.9	5.6	chr21	33109839	33109891	(13600092)	+	(CCTCC)n	Simple_repeat	1	54	(0)	2404327
46	14.0	1.6	7.6	chr21	33157371	33157499	(13552484)	+	(CTCCTC)n	Simple_repeat	1	131	(0)	2404406
408	33.3	2.6	1.6	chr21	33196800	33196988	(13512995)	+	MIR3	SINE/MIR	14	199	(9)	2404485
370	26.8	8.2	3.5	chr21	33197091	33197287	(13512696)	C	MamSINE1	SINE/tRNA-RTE	(63)	227	21	2404486
16	17.2	7.4	1.7	chr21	33230305	33230358	(13479625)	+	(TCC)n	Simple_repeat	1	58	(0)	2404551
14	28.2	4.7	0.0	chr21	33230359	33230368	(13479615)	+	(TCCCTC)n	Simple_repeat	1	67	(0)	2404552
567	2.8	12.3	0.0	chr21	33402903	33402973	(13307010)	+	AluSc	SINE/Alu	207	287	(22)	2404894
17	17.0	2.0	3.9	chr21	33543503	33543552	(13166431)	+	(CCTCCG)n	Simple_repeat	1	51	(0)	2405206
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
532	34.4	3.2	3.4	chr21	33817211	33817589	(12892394)	+	L2c	LINE/L2	2922	3299	(88)	2405673
13	16.3	2.8	2.7	chr21	33948350	33948385	(12761598)	+	(CTCCC)n	Simple_repeat	1	37	(0)	2405868
53	0.0	0.0	0.0	chr21	34202389	34202433	(12507550)	+	(GT)n	Simple_repeat	1	45	(0)	2406265
18	4.8	0.0	0.0	chr21	34202434	34202455	(12507528)	+	(AG)n	Simple_repeat	1	22	(0)	2406266
470	28.8	8.4	1.6	chr21	34510344	34510678	(12199305)	+	L2a	LINE/L2	2888	3240	(186)	2406754
20	21.8	6.2	2.4	chr21	34600474	34600553	(12109430)	+	GA-rich	Low_complexity	1	85	(0)	2406885
17	11.8	2.4	4.8	chr21	34724288	34724328	(11985655)	+	GA-rich	Low_complexity	1	42	(0)	2407072
64	27.0	0.9	4.1	chr21	35206612	35206625	(11503358)	+	(CCCT)n	Simple_repeat	1	17	(202)	2407770
12	29.0	2.0	0.0	chr21	35206626	35206675	(11503308)	+	(CTCTGT)n	Simple_repeat	1	51	(0)	2407771
64	27.0	0.9	4.1	chr21	35206676	35206828	(11503155)	+	(CCCT)n	Simple_repeat	18	219	(0)	2407770
1073	25.1	8.5	14.1	chr21	35305504	35306093	(11403890)	C	MLT1H1	LTR/ERVL-MaLR	(1)	554	1	2407921
1021	11.2	5.4	1.2	chr21	36136163	36136322	(10573661)	+	AluSx	SINE/Alu	130	296	(16)	2409206
275	19.7	5.3	0.0	chr21	36136538	36136608	(10573375)	+	LTR16C	LTR/ERVL	166	240	(249)	2409207
3466	16.8	3.5	5.7	chr21	36167538	36167931	(10542052)	C	L1MB5	LINE/L1	(8)	6166	5777	2409280
30	7.1	0.0	2.1	chr21	36187185	36187231	(10522752)	+	(CCTCC)n	Simple_repeat	1	47	(0)	2409325
2045	12.6	0.0	0.7	chr21	36187319	36187596	(10522387)	C	AluSx1	SINE/Alu	(36)	276	1	2409326
988	10.9	2.2	0.7	chr21	36260043	36260179	(10449804)	+	AluSz6	SINE/Alu	170	308	(4)	2409469
23	22.0	5.8	2.2	chr21	36260180	36260265	(10449718)	+	A-rich	Low_complexity	1	91	(0)	2409470
33	0.0	0.0	0.0	chr21	36260267	36260297	(10449686)	+	(GAAA)n	Simple_repeat	1	31	(0)	2409471
22	21.7	9.1	0.0	chr21	36321672	36321748	(10388235)	+	(TC)n	Simple_repeat	1	84	(0)	2409610
603	13.5	1.0	0.0	chr21	36589290	36589385	(10120598)	C	MER53	DNA/hAT	(0)	193	97	2410151
1115	26.0	17.9	6.9	chr21	36589537	36590202	(10119781)	+	MER20B	DNA/hAT-Charlie	1	755	(28)	2410152
1103	17.9	2.8	2.8	chr21	36640948	36641165	(10068818)	C	MER20	DNA/hAT-Charlie	(0)	219	2	2410233
274	29.0	12.8	5.3	chr21	36664083	36664442	(10045541)	C	L2b	LINE/L2	(50)	3325	2935	2410289
3230	11.6	2.2	1.0	chr21	36824112	36824609	(9885374)	+	L1PA8	LINE/L1	5669	6172	(0)	2410511
912	23.6	6.0	8.2	chr21	36829698	36829917	(9880066)	+	LTR40A1	LTR/ERVL	173	375	(209)	2410520
1968	17.9	0.8	6.3	chr21	36829918	36830329	(9879654)	+	MLT1B	LTR/ERVL-MaLR	2	390	(0)	2410521
233	26.2	7.2	7.2	chr21	36861040	36861150	(9848833)	C	L2b	LINE/L2	(1)	3374	3264	2410571
98	5.8	5.8	2.2	chr21	37039661	37039847	(9670136)	+	(CTCCCT)n	Simple_repeat	1	193	(0)	2410916
329	11.5	1.8	1.8	chr21	37273465	37273530	(9436453)	+	L1MC5a	LINE/L1	2579	2634	(143)	2411277
59	15.9	6.3	0.7	chr21	37273531	37273673	(9436310)	+	GA-rich	Low_complexity	1	152	(0)	2411278
20	15.6	1.5	7.5	chr21	37366467	37366532	(9343451)	+	(CCTCC)n	Simple_repeat	1	67	(0)	2411468
28	6.0	0.0	0.0	chr21	37367944	37367978	(9342005)	+	(TCC)n	Simple_repeat	1	35	(0)	2411474
19	11.9	4.1	3.9	chr21	37368074	37368122	(9341861)	+	G-rich	Low_complexity	1	51	(0)	2411475
12	22.8	6.9	1.6	chr21	37368099	37368156	(9341827)	+	(CGGCCG)n	Simple_repeat	1	62	(0)	2411476
517	27.6	0.6	2.9	chr21	37452463	37452637	(9257346)	C	MER117	DNA/hAT-Charlie	(26)	171	1	2411624
13	19.9	4.9	0.0	chr21	37452642	37452682	(9257301)	+	G-rich	Low_complexity	1	43	(0)	2411625
18	0.0	0.0	0.0	chr21	37452758	37452777	(9257206)	+	(T)n	Simple_repeat	1	20	(0)	2411626
260	27.9	2.5	0.0	chr21	37547714	37547792	(9162191)	+	MIR3	SINE/MIR	87	167	(41)	2411766
180	35.8	4.4	1.8	chr21	37565186	37565296	(9144687)	+	L2	LINE/L2	2382	2495	(924)	2411794
279	16.7	0.0	1.8	chr21	37565403	37565457	(9144526)	C	MER49	LTR/ERV1	(0)	923	870	2411795
2011	9.3	0.7	11.1	chr21	37565473	37565704	(9144279)	C	AluSz6	SINE/Alu	(2)	310	114	2411796
133	16.3	2.9	6.2	chr21	37712436	37712812	(8997171)	+	(TCCTCCC)n	Simple_repeat	1	388	(0)	2412013
329	19.3	5.4	8.3	chr21	38314828	38314923	(8395060)	C	MER96B	DNA/hAT-Tip100	(9)	408	316	2412861
270	25.3	23.6	0.7	chr21	38314934	38315080	(8394903)	+	L1ME1	LINE/L1	2988	3178	(2968)	2412862
1918	24.4	9.1	0.0	chr21	38323590	38324106	(8385877)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	1	2412876
393	25.8	3.2	0.8	chr21	38351476	38351596	(8358387)	+	MER5A1	DNA/hAT-Charlie	39	162	(4)	2412913
45	34.5	0.5	4.2	chr21	38351665	38351878	(8358105)	+	G-rich	Low_complexity	1	215	(0)	2412914
45	11.3	2.1	4.2	chr21	38660991	38661083	(8048900)	+	GA-rich	Low_complexity	1	95	(0)	2413293
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
1908	12.2	0.0	0.4	chr21	39366458	39366719	(7343264)	C	AluSz	SINE/Alu	(51)	261	1	2414448
58	10.2	1.2	10.4	chr21	39366811	39366971	(7343012)	+	(CCCTT)n	Simple_repeat	1	163	(0)	2414449
27	13.7	1.7	3.3	chr21	39374892	39374951	(7335032)	+	(TCCCC)n	Simple_repeat	1	61	(0)	2414477
1930	15.9	0.7	0.3	chr21	39374952	39375241	(7334742)	C	AluJb	SINE/Alu	(21)	291	1	2414478
1435	28.1	4.1	0.8	chr21	39444580	39445075	(7264908)	C	L2	LINE/L2	(648)	2771	2259	2414609
510	28.5	19.6	0.4	chr21	39563001	39563271	(7146712)	C	MamGypsy2-I	LTR/Gypsy	(2915)	1251	916	2414808
67	23.5	4.0	3.0	chr21	39563440	39563665	(7146318)	+	(CCTC)n	Simple_repeat	1	235	(0)	2414812
225	20.9	21.4	2.6	chr21	42516320	42516432	(4193551)	+	MIRc	SINE/MIR	70	209	(59)	2418992
12	15.0	3.3	0.0	chr21	42593521	42593550	(4116433)	+	(CCCCGG)n	Simple_repeat	1	31	(0)	2419060
13	19.9	5.0	0.0	chr21	42640724	42640763	(4069220)	+	G-rich	Low_complexity	1	42	(0)	2419123
340	32.6	3.6	0.8	chr21	42640767	42640899	(4069084)	+	MLT1K	LTR/ERVL-MaLR	452	588	(7)	2419124
13	21.2	5.9	1.9	chr21	42653637	42653687	(4056296)	+	(GCG)n	Simple_repeat	1	54	(0)	2419139
19	12.8	2.1	4.2	chr21	42653711	42653757	(4056226)	+	(CCGCCCC)n	Simple_repeat	1	48	(0)	2419140
1378	11.7	0.0	0.0	chr21	42801672	42801876	(3908107)	C	HERVH-int	LTR/ERV1	(1894)	5819	5615	2419360
2896	13.1	8.9	0.2	chr21	42801912	42802520	(3907463)	C	HERVH-int	LTR/ERV1	(2564)	5149	4488	2419360
639	28.7	4.7	2.4	chr21	42817784	42818311	(3891672)	+	L1MEd	LINE/L1	1954	2506	(3640)	2419383
14	10.1	3.9	9.3	chr21	42818325	42818376	(3891607)	+	(TCTTCC)n	Simple_repeat	1	54	(0)	2419384
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
16	24.7	2.8	4.0	chr21	42974392	42974463	(3735520)	+	(CCCGCC)n	Simple_repeat	1	74	(0)	2419663
3319	19.1	2.3	3.1	chr21	42983122	42984051	(3725932)	C	L1MB3	LINE/L1	(2)	6181	5308	2419678
180	26.5	0.0	3.9	chr21	42997951	42998001	(3711982)	C	L2a	LINE/L2	(570)	2849	2801	2419715
654	25.0	8.9	5.6	chr21	43311503	43311871	(3398112)	C	MLT1B	LTR/ERVL-MaLR	(12)	378	13	2420136
242	27.0	9.9	3.9	chr21	43646929	43647032	(3062951)	+	L2a	LINE/L2	3312	3422	(4)	2420556
31	28.8	4.0	2.8	chr21	43653137	43653181	(3056802)	+	GA-rich	Low_complexity	1	165	(0)	2420570
64	10.3	0.0	5.0	chr21	43653182	43653300	(3056683)	+	G-rich	Low_complexity	1	119	(0)	2420571
978	15.7	0.6	0.0	chr21	43705028	43705186	(3004797)	+	L1PA16	LINE/L1	5804	5963	(203)	2420654
1354	16.1	1.9	0.4	chr21	43705182	43705442	(3004541)	+	L1PA16	LINE/L1	5902	6166	(0)	2420655
2291	12.5	0.0	0.0	chr21	43705446	43705757	(3004226)	+	AluSx1	SINE/Alu	1	312	(0)	2420656
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
3521	17.4	1.1	4.3	chr21	43844688	43844970	(2865013)	C	L1M4	LINE/L1	(2837)	3309	3031	2420896
741	18.8	4.0	7.6	chr21	43844976	43845159	(2864824)	C	L1MC1	LINE/L1	(5)	6328	6152	2420910
1516	10.6	0.0	0.0	chr21	43845161	43845359	(2864624)	C	AluSx	SINE/Alu	(10)	302	104	2420911
33	18.5	2.3	3.4	chr21	43884217	43884303	(2825680)	+	(CTC)n	Simple_repeat	1	89	(0)	2420982
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
28	27.2	1.2	0.0	chr21	44460118	44460201	(2249782)	+	(CCCTC)n	Simple_repeat	1	85	(0)	2421778
335	26.5	20.7	6.9	chr21	44802745	44803316	(1906667)	+	L2a	LINE/L2	2702	3425	(1)	2422174
3711	9.1	1.0	1.8	chr21	44908224	44908728	(1801255)	+	LTR2C	LTR/ERV1	1	501	(0)	2422306
810	23.7	3.1	0.0	chr21	44929535	44929720	(1780263)	C	MER58A	DNA/hAT-Charlie	(31)	193	2	2422332
2266	11.4	0.0	0.0	chr21	45400847	45401143	(1308840)	+	AluY	SINE/Alu	1	297	(14)	2422831
764	30.8	3.8	5.8	chr21	45401159	45401776	(1308207)	C	L1MEc	LINE/L1	(4919)	1589	985	2422826
66	21.2	5.3	1.8	chr21	45607550	45607756	(1102227)	+	GA-rich	Low_complexity	1	218	(0)	2422992
301	22.8	6.5	10.6	chr21	45607774	45607886	(1102097)	+	L1MA10	LINE/L1	6227	6334	(0)	2422993
194	19.5	2.4	0.0	chr21	45623257	45623297	(1086686)	+	L3b	LINE/CR1	5190	5231	(1)	2423015
1586	18.9	8.3	1.7	chr21	45623353	45623712	(1086271)	+	MLT1B	LTR/ERVL-MaLR	1	386	(4)	2423016
297	17.2	0.0	0.0	chr21	46228170	46228227	(481756)	+	L1MC4a	LINE/L1	7825	7882	(0)	2423634
20	9.7	0.0	2.8	chr21	46295476	46295511	(414472)	+	(CCT)n	Simple_repeat	1	36	(0)	2423745
819	15.2	0.0	0.8	chr21	46319489	46319613	(390370)	+	AluJr	SINE/Alu	9	132	(180)	2423799
13	4.1	8.0	0.0	chr21	46325382	46325406	(384577)	+	(GGAG)n	Simple_repeat	1	27	(0)	2423814
78	15.7	2.3	2.9	chr21	46423695	46423865	(286118)	+	G-rich	Low_complexity	1	175	(0)	2423936
10975	13.3	8.3	6.2	chr21	46633448	46634438	(75545)	C	MER4-int	LTR/ERV1	(5565)	1033	1	2424206
4258	18.7	2.8	1.5	chr22	17912138	17913046	(32905422)	C	L1M3	LINE/L1	(1295)	4845	3925	2429873
296	20.9	13.1	3.4	chr22	17913194	17913282	(32905186)	+	L2b	LINE/L2	3191	3289	(86)	2429875
1219	27.1	10.2	4.9	chr22	17916199	17916874	(32901594)	+	L2a	LINE/L2	1578	2293	(1126)	2429882
1635	14.1	0.3	3.8	chr22	17948636	17948926	(32869542)	+	AluJb	SINE/Alu	16	296	(16)	2429921
656	13.3	1.8	3.5	chr22	18087757	18087869	(32730599)	+	AluJb	SINE/Alu	191	301	(11)	2430197
3580	17.7	4.3	3.2	chr22	19109050	19109781	(31708687)	+	L1MB2	LINE/L1	5402	6145	(26)	2431458
1856	22.8	6.1	1.4	chr22	19390980	19391464	(31427004)	+	L1ME2	LINE/L1	5628	6136	(28)	2431919
2662	5.2	0.3	0.0	chr22	19391472	19391779	(31426689)	C	AluY	SINE/Alu	(2)	309	1	2431920
886	16.9	0.6	0.0	chr22	19630252	19630411	(31188057)	+	MLT1B	LTR/ERVL-MaLR	1	161	(229)	2432345
15	19.1	4.9	6.2	chr22	19663726	19663786	(31154682)	+	(TC)n	Simple_repeat	1	64	(0)	2432392
2071	18.5	6.7	2.8	chr22	19942683	19943183	(30875285)	C	MER67A	LTR/ERV1	(21)	522	1	2432714
818	24.7	2.9	5.3	chr22	19943187	19943365	(30875103)	C	MER31-int	LTR/ERV1	(24)	4912	4731	2432714
13	8.1	0.0	6.7	chr22	20181429	20181458	(30637010)	+	(GGGGA)n	Simple_repeat	1	30	(0)	2432988
17	10.4	0.0	3.0	chr22	20203964	20203996	(30614472)	+	(GGAAGG)n	Simple_repeat	1	33	(0)	2433013
242	13.3	4.2	0.0	chr22	20246896	20246940	(30571528)	C	MIR	SINE/MIR	(123)	139	93	2433041
12	19.3	4.7	2.2	chr22	20247180	20247222	(30571246)	+	G-rich	Low_complexity	1	45	(0)	2433042
12	11.8	10.3	0.0	chr22	20413176	20413191	(30405277)	+	G-rich	Low_complexity	1	17	(0)	2433266
38	0.0	2.3	2.3	chr22	20413192	20413234	(30405234)	+	(AAGGGG)n	Simple_repeat	1	44	(0)	2433267
12	11.8	10.3	0.0	chr22	20413235	20413256	(30405212)	+	G-rich	Low_complexity	18	42	(0)	2433268
34	10.0	4.5	1.4	chr22	20413245	20413311	(30405157)	+	A-rich	Low_complexity	1	70	(0)	2433269
225	28.9	0.0	0.0	chr22	20413312	20413363	(30405105)	C	MER58C	DNA/hAT-Charlie	(162)	53	2	2433270
12	4.5	4.0	3.9	chr22	20436382	20436406	(30382062)	+	(CCG)n	Simple_repeat	1	26	(0)	2433313
234	32.2	11.4	3.2	chr22	20437106	20437385	(30381083)	+	L2b	LINE/L2	2931	3237	(150)	2433314
224	31.9	7.5	2.2	chr22	20531403	20531540	(30286928)	C	MIRb	SINE/MIR	(60)	148	3	2433506
32	13.3	1.7	0.0	chr22	20962142	20962200	(29856268)	+	(CTCCC)n	Simple_repeat	1	60	(0)	2434335
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
14	17.6	0.0	0.0	chr22	21629314	21629345	(29189123)	+	(GCACGT)n	Simple_repeat	1	32	(0)	2435563
10224	5.4	1.0	0.7	chr22	21676369	21677721	(29140747)	C	SVA_C	Retroposon/SVA	(7)	1377	21	2435673
206	10.3	0.0	0.0	chr22	21677722	21677750	(29140718)	C	L2a	LINE/L2	(14)	3412	3384	2435674
442	25.7	4.2	5.6	chr22	21677895	21678170	(29140298)	C	L2a	LINE/L2	(305)	3121	2846	2435675
17	22.4	1.8	3.5	chr22	23533397	23533452	(27285016)	+	GA-rich	Low_complexity	1	57	(0)	2438457
52	24.5	1.5	5.5	chr22	23533978	23534173	(27284295)	+	G-rich	Low_complexity	1	199	(0)	2438458
2264	11.5	1.0	1.0	chr22	23564972	23565283	(27253185)	+	AluSx	SINE/Alu	1	312	(0)	2438494
335	34.3	4.5	1.8	chr22	23565343	23565512	(27252956)	C	MIR3	SINE/MIR	(24)	184	5	2438495
15	26.9	3.3	1.6	chr22	23565552	23565612	(27252856)	+	(CCCTCT)n	Simple_repeat	1	63	(0)	2438496
182	33.9	7.8	4.8	chr22	23591334	23591457	(27227011)	+	MIR1_Amn	SINE/MIR	29	156	(74)	2438565
2329	9.2	1.0	0.3	chr22	23761105	23761407	(27057061)	+	AluSp	SINE/Alu	2	306	(7)	2438923
19	10.4	0.0	0.0	chr22	23761408	23761439	(27057029)	+	(GGGA)n	Simple_repeat	1	32	(0)	2438924
32	2.9	0.0	0.0	chr22	23761459	23761493	(27056975)	+	(GGGAG)n	Simple_repeat	1	35	(0)	2438925
1980	10.8	3.4	0.3	chr22	23761600	23761885	(27056583)	+	AluSx1	SINE/Alu	1	295	(17)	2438926
725	10.9	4.4	0.9	chr22	23762767	23762876	(27055592)	+	FLAM_C	SINE/Alu	12	125	(18)	2438931
1779	18.7	1.9	1.3	chr22	24147434	24147743	(26670725)	C	AluJb	SINE/Alu	(0)	312	1	2439573
15	17.0	0.0	0.0	chr22	24270700	24270732	(26547736)	+	G-rich	Low_complexity	1	33	(0)	2439766
518	25.4	2.3	2.3	chr22	24431905	24432033	(26386435)	C	MIR3	SINE/MIR	(3)	205	77	2440017
49	20.8	0.0	0.9	chr22	24696137	24696241	(26122227)	+	(CCT)n	Simple_repeat	1	105	(0)	2440487
1207	17.4	2.0	0.5	chr22	24698100	24698295	(26120173)	+	AluJr	SINE/Alu	92	290	(22)	2440488
344	22.6	0.9	11.7	chr22	24805800	24805919	(26012549)	C	MIRb	SINE/MIR	(45)	223	117	2440685
199	33.1	9.9	4.5	chr22	24996452	24996505	(25821963)	+	MIR1_Amn	SINE/MIR	3	61	(169)	2441197
1094	23.7	13.8	4.6	chr22	24996506	24996917	(25821551)	C	LTR16A1	LTR/ERVL	(0)	456	1	2441198
260	29.2	10.3	2.3	chr22	24996918	24997050	(25821418)	+	MIR3	SINE/MIR	52	196	(12)	2441199
257	32.3	11.3	4.0	chr22	25014006	25014282	(25804186)	+	L1M5	LINE/L1	5588	5887	(237)	2441246
35	19.1	1.0	5.0	chr22	25282477	25282574	(25535894)	+	GA-rich	Low_complexity	1	99	(0)	2441920
722	26.0	3.5	3.1	chr22	25448782	25449075	(25369393)	C	L1M3	LINE/L1	(744)	5402	5102	2442212
396	30.7	2.1	0.7	chr22	25546325	25546465	(25272003)	+	LTR103b_Mam	LTR/ERV1?	336	478	(70)	2442458
36	12.1	1.5	1.5	chr22	25564572	25564636	(25253832)	+	GA-rich	Low_complexity	1	66	(0)	2442496
1356	14.9	13.8	1.6	chr22	25930506	25930753	(24887715)	C	AluJb	SINE/Alu	(9)	303	21	2443182
19	22.5	0.0	4.8	chr22	26429767	26429829	(24388639)	+	(TCCCCTC)n	Simple_repeat	1	63	(0)	2444334
12	17.3	0.0	5.6	chr22	26751533	26751568	(24066900)	+	GA-rich	Low_complexity	1	36	(0)	2445085
469	32.1	3.7	2.3	chr22	27108426	27108632	(23709836)	C	MIRb	SINE/MIR	(43)	225	15	2445948
17	17.5	4.4	0.0	chr22	27108745	27108789	(23709679)	+	(AAGAATG)n	Simple_repeat	1	47	(0)	2445949
343	26.7	0.3	4.6	chr22	27670461	27670601	(23147867)	C	MIRb	SINE/MIR	(61)	207	66	2447257
27	0.0	0.0	5.7	chr22	27670710	27670744	(23147724)	+	(CCCCTTC)n	Simple_repeat	1	35	(0)	2447258
13	18.0	0.0	2.9	chr22	27794880	27794913	(23023555)	+	G-rich	Low_complexity	1	34	(0)	2447528
192	28.0	10.7	2.9	chr22	27815903	27816005	(23002463)	C	MIRb	SINE/MIR	(82)	186	75	2447567
374	34.2	10.4	6.2	chr22	27816006	27816391	(23002077)	C	L2b	LINE/L2	(4)	3371	2968	2447568
2168	17.3	3.5	3.0	chr22	28629889	28630279	(22188189)	+	MSTB1	LTR/ERVL-MaLR	1	399	(33)	2448820
1359	8.0	0.0	2.3	chr22	28729963	28730138	(22088330)	C	AluY	SINE/Alu	(135)	176	5	2449048
69	8.8	1.9	11.5	chr22	28730195	28730399	(22088069)	+	A-rich	Low_complexity	1	209	(0)	2449049
390	24.0	1.5	4.4	chr22	28772424	28772573	(22045895)	C	MIR	SINE/MIR	(54)	208	74	2449169
15	0.0	0.0	0.0	chr22	28883651	28883669	(21934799)	+	(GCC)n	Simple_repeat	1	19	(0)	2449492
12	13.0	8.8	0.0	chr22	29004719	29004767	(21813701)	+	GA-rich	Low_complexity	1	53	(0)	2449717
13	24.7	1.8	3.5	chr22	29265981	29265991	(21552477)	+	(CCCTCCT)n	Simple_repeat	1	55	(0)	2450241
13	23.8	2.2	2.1	chr22	29265992	29266037	(21552431)	+	(CCTC)n	Simple_repeat	1	47	(0)	2450242
323	22.2	0.0	3.6	chr22	29304391	29304474	(21513994)	+	MIR	SINE/MIR	108	188	(74)	2450298
428	23.4	21.8	4.7	chr22	29304472	29304746	(21513722)	+	L2a	LINE/L2	2439	2802	(617)	2450291
232	12.4	0.6	0.0	chr22	29306448	29306497	(21511971)	+	MIRc	SINE/MIR	90	144	(124)	2450302
15	18.3	2.1	4.2	chr22	29307067	29307113	(21511355)	+	(CGGCC)n	Simple_repeat	1	48	(0)	2450303
1239	24.0	12.2	1.7	chr22	29382404	29382964	(21435504)	C	L2a	LINE/L2	(14)	3412	2783	2450435
215	31.8	0.0	0.0	chr22	29388808	29388873	(21429595)	C	MIR1_Amn	SINE/MIR	(77)	153	88	2450444
12	16.1	0.0	7.5	chr22	29478132	29478171	(21340297)	+	(CTCCCT)n	Simple_repeat	1	40	(0)	2450659
13	19.2	6.1	1.9	chr22	29553633	29553681	(21264787)	+	(CCCATCT)n	Simple_repeat	1	52	(0)	2450825
11	25.3	0.0	5.8	chr22	29580899	29580950	(21237518)	+	(CAGCCC)n	Simple_repeat	1	52	(0)	2450909
12	12.1	7.9	2.4	chr22	29766978	29767015	(21051453)	+	(TCCTGCG)n	Simple_repeat	1	41	(0)	2451281
13	0.0	0.0	0.0	chr22	29883217	29883233	(20935235)	+	(GGC)n	Simple_repeat	1	17	(0)	2451571
17	25.9	3.3	0.0	chr22	30196446	30196505	(20621963)	+	(CGCCAT)n	Simple_repeat	1	62	(0)	2452112
16	16.0	7.0	0.0	chr22	30246294	30246336	(20572132)	+	A-rich	Low_complexity	1	46	(0)	2452227
32	8.3	1.9	1.8	chr22	30246390	30246443	(20572025)	+	(GGA)n	Simple_repeat	1	55	(0)	2452228
14	12.5	0.0	3.5	chr22	30256293	30256321	(20562147)	+	GA-rich	Low_complexity	1	29	(0)	2452244
323	27.5	13.8	1.9	chr22	30256392	30256543	(20561925)	C	MIRb	SINE/MIR	(72)	196	26	2452245
213	23.4	0.0	0.0	chr22	30291016	30291062	(20527406)	+	MIR3	SINE/MIR	104	150	(58)	2452301
13	23.2	0.0	2.4	chr22	30397181	30397222	(20421246)	+	(GCCCTG)n	Simple_repeat	1	42	(0)	2452517
390	22.8	7.3	0.0	chr22	30426542	30426668	(20391800)	C	MIRb	SINE/MIR	(98)	170	34	2452590
26	14.7	5.6	2.7	chr22	30583135	30583205	(20235263)	+	GA-rich	Low_complexity	1	75	(0)	2452946
12	17.6	0.0	5.6	chr22	30635629	30635664	(20182804)	+	G-rich	Low_complexity	1	36	(0)	2453063
1293	31.4	10.9	7.4	chr22	31234743	31235208	(19583260)	+	L2c	LINE/L2	2893	3383	(4)	2454323
15	4.3	0.0	3.9	chr22	31248303	31248328	(19570140)	+	(CCCT)n	Simple_repeat	1	26	(0)	2454365
17	20.2	4.8	4.6	chr22	31346017	31346078	(19472390)	+	(CG)n	Simple_repeat	1	65	(0)	2454547
44	24.2	3.4	4.3	chr22	31346131	31346309	(19472159)	+	(GGC)n	Simple_repeat	1	185	(0)	2454548
327	28.7	4.9	11.5	chr22	31377510	31377840	(19440628)	C	L1MEc	LINE/L1	(5649)	751	444	2454639
18	6.3	0.0	7.7	chr22	31377900	31377938	(19440530)	+	(CCTCC)n	Simple_repeat	1	39	(0)	2454649
1682	13.0	0.4	0.0	chr22	31377940	31378193	(19440275)	C	AluSz	SINE/Alu	(37)	275	21	2454650
1724	18.4	0.4	0.0	chr22	31389004	31389280	(19429188)	C	AluJr	SINE/Alu	(11)	301	24	2454676
20	18.8	0.0	2.0	chr22	31389303	31389352	(19429116)	+	(AATTTTT)n	Simple_repeat	1	50	(0)	2454677
64	14.8	5.6	4.3	chr22	31389362	31389539	(19428929)	+	(TTCC)n	Simple_repeat	1	188	(0)	2454678
1646	20.3	2.1	0.0	chr22	31389540	31389825	(19428643)	C	AluJb	SINE/Alu	(20)	292	1	2454679
12	20.1	0.0	2.8	chr22	31631011	31631046	(19187422)	+	G-rich	Low_complexity	1	36	(0)	2455233
435	28.1	5.5	0.0	chr22	31936343	31936463	(18882005)	C	MIRb	SINE/MIR	(114)	154	27	2455985
184	17.6	15.0	1.4	chr22	31936571	31936639	(18881829)	C	MamTip2	DNA/hAT-Tip100	(28)	277	198	2455986
190	31.3	2.7	5.5	chr22	31936726	31936853	(18881615)	C	L2b	LINE/L2	(8)	3367	3254	2455987
27	7.7	0.0	2.3	chr22	32077208	32077251	(18741217)	+	(TTCC)n	Simple_repeat	1	44	(0)	2456337
30	35.1	4.4	2.4	chr22	32077252	32077429	(18741039)	+	(TCCC)n	Simple_repeat	3	184	(0)	2456338
1017	23.4	3.3	4.8	chr22	32164478	32164787	(18653681)	+	L1MD2	LINE/L1	6052	6356	(3)	2456476
252	29.2	7.3	0.0	chr22	32622855	32622943	(18195525)	C	MIR3	SINE/MIR	(49)	159	64	2457364
36	8.5	0.0	0.0	chr22	33052387	33052437	(17766031)	+	(TCC)n	Simple_repeat	1	51	(0)	2458281
59	23.6	2.3	2.2	chr22	33299204	33299306	(17519162)	+	A-rich	Low_complexity	75	175	(0)	2458763
20	21.4	1.7	3.3	chr22	33299275	33299351	(17519117)	+	GA-rich	Low_complexity	1	75	(0)	2458764
258	24.6	0.0	0.0	chr22	33299412	33299468	(17519000)	+	L2b	LINE/L2	3370	3426	(0)	2458748
26	18.0	5.2	4.9	chr22	33873970	33874066	(16944402)	+	(TCTCC)n	Simple_repeat	1	102	(0)	2459963
1940	9.2	0.0	11.4	chr22	35110809	35111124	(15707344)	+	AluSz	SINE/Alu	1	280	(32)	2462279
35	10.9	2.6	5.0	chr22	35111125	35111202	(15707266)	+	GA-rich	Low_complexity	1	80	(0)	2462280
2409	8.9	0.3	0.0	chr22	35477674	35477975	(15340493)	C	AluSx1	SINE/Alu	(9)	303	1	2463105
173	21.0	2.8	0.5	chr22	35483542	35483936	(15334532)	+	GA-rich	Low_complexity	1	406	(0)	2463116
221	25.5	17.3	0.9	chr22	35484122	35484232	(15334236)	+	L3	LINE/CR1	3930	4062	(37)	2463117
5472	15.3	3.3	1.6	chr22	35504170	35505185	(15313283)	+	L1MA5	LINE/L1	5265	6298	(2)	2463156
2273	12.7	1.3	0.0	chr22	35515635	35515942	(15302526)	C	AluSx	SINE/Alu	(0)	312	1	2463190
46	17.0	3.1	0.0	chr22	35516025	35516039	(15302429)	+	(TCTC)n	Simple_repeat	1	15	(0)	2463191
83	0.0	2.4	1.1	chr22	35516040	35516124	(15302344)	+	(CCTTC)n	Simple_repeat	1	87	(0)	2463192
46	15.0	2.9	2.8	chr22	35516125	35516210	(15302258)	+	(TTCT)n	Simple_repeat	1	88	(0)	2463193
268	32.7	4.1	6.9	chr22	35623652	35623772	(15194696)	+	MIR	SINE/MIR	84	201	(61)	2463455
17	17.9	2.6	0.0	chr22	36028932	36028970	(14789498)	+	G-rich	Low_complexity	1	40	(0)	2464176
1412	27.4	8.0	3.8	chr22	36052812	36053444	(14765024)	C	HAL1	LINE/L1	(685)	1822	1161	2464243
184	10.7	2.9	7.0	chr22	36053445	36053887	(14764581)	+	(CCCTT)n	Simple_repeat	1	456	(0)	2464244
511	28.1	4.5	4.5	chr22	36077323	36077501	(14740967)	+	MLT1K	LTR/ERVL-MaLR	149	327	(268)	2464311
21	15.2	3.8	1.8	chr22	36221755	36221811	(14596657)	+	(TTTGCT)n	Simple_repeat	1	58	(0)	2464603
302	29.2	2.7	1.9	chr22	36239877	36239982	(14578486)	+	MIRb	SINE/MIR	3	125	(143)	2464639
27	0.0	0.0	0.0	chr22	36332662	36332690	(14485778)	+	(A)n	Simple_repeat	1	29	(0)	2464775
205	19.8	0.0	3.1	chr22	36366520	36366581	(14451887)	C	MIRc	SINE/MIR	(60)	148	91	2464837
220	21.8	9.3	1.3	chr22	36433224	36433302	(14385166)	+	L2b	LINE/L2	3255	3340	(35)	2465026
301	34.5	5.1	1.8	chr22	36546200	36546370	(14272098)	C	X7A_LINE	LINE/CR1	(33)	234	58	2465304
185	29.2	2.7	4.0	chr22	36659706	36659780	(14158688)	+	MIRc	SINE/MIR	11	84	(184)	2465579
73	1.5	0.0	0.0	chr22	36703761	36703827	(14114641)	+	(CT)n	Simple_repeat	1	67	(0)	2465663
366	33.9	6.5	2.1	chr22	36705673	36705860	(14112608)	+	MIRb	SINE/MIR	9	189	(19)	2465665
14	22.7	2.0	3.9	chr22	37052062	37052111	(13766357)	+	GA-rich	Low_complexity	1	51	(0)	2466410
15	22.2	7.6	1.4	chr22	37188281	37188346	(13630122)	+	GA-rich	Low_complexity	1	71	(0)	2466691
21	22.5	4.5	0.0	chr22	37519123	37519189	(13299279)	+	(CGCCTC)n	Simple_repeat	1	70	(0)	2467416
15	18.1	0.0	0.0	chr22	37539055	37539086	(13279382)	+	GA-rich	Low_complexity	1	32	(0)	2467473
187	22.4	10.8	6.5	chr22	37539106	37539167	(13279301)	C	L2c	LINE/L2	(30)	3357	3293	2467474
1409	20.8	14.9	6.5	chr22	37539236	37539347	(13279121)	+	MLT1D	LTR/ERVL-MaLR	1	107	(398)	2467475
190	30.2	7.4	0.0	chr22	37541798	37541860	(13276608)	+	L2c	LINE/L2	3318	3385	(2)	2467479
12	14.6	0.0	5.9	chr22	37633028	37633061	(13185407)	+	(AGGCCC)n	Simple_repeat	1	34	(0)	2467697
327	23.9	14.8	0.9	chr22	37661632	37661741	(13156727)	+	L2a	LINE/L2	3297	3424	(2)	2467758
1266	13.2	0.0	1.6	chr22	37661893	37662115	(13156353)	C	AluSx1	SINE/Alu	(0)	312	127	2467759
193	23.2	12.5	0.0	chr22	37686095	37686150	(13132318)	C	L2b	LINE/L2	(3)	3423	3360	2467834
1678	17.2	2.9	0.4	chr22	37704109	37704381	(13114087)	+	AluJb	SINE/Alu	2	281	(31)	2467874
68	1.6	0.0	0.0	chr22	37704382	37704446	(13114022)	+	(CAGAA)n	Simple_repeat	1	65	(0)	2467875
32	16.2	1.5	1.5	chr22	37704451	37704517	(13113951)	+	G-rich	Low_complexity	1	68	(0)	2467876
181	32.3	12.6	9.0	chr22	37704530	37704766	(13113702)	C	L2a	LINE/L2	(80)	3307	3052	2467873
32	2.9	0.0	0.0	chr22	37802609	37802643	(13015825)	+	(GAGGC)n	Simple_repeat	1	35	(0)	2468117
502	23.7	3.8	5.0	chr22	37849788	37849947	(12968521)	+	L2c	LINE/L2	3195	3352	(35)	2468219
1439	26.7	13.4	4.0	chr22	37860673	37860965	(12957503)	+	L2a	LINE/L2	2645	2981	(438)	2468248
326	34.5	9.1	0.9	chr22	37860941	37861162	(12957306)	+	L2a	LINE/L2	3185	3426	(0)	2468248
1096	30.9	12.3	1.9	chr22	38200999	38201741	(12616727)	C	L2a	LINE/L2	(228)	3198	2244	2469021
62	0.0	0.0	0.0	chr22	38278755	38278807	(12539661)	+	(TG)n	Simple_repeat	1	53	(0)	2469162
1099	23.8	3.3	0.3	chr22	38278840	38279134	(12539334)	C	MLT1K	LTR/ERVL-MaLR	(285)	310	7	2469163
16	6.0	4.9	7.0	chr22	38293325	38293365	(12525103)	+	GA-rich	Low_complexity	1	43	(0)	2469198
17	25.9	1.4	4.2	chr22	38317669	38317738	(12500730)	+	G-rich	Low_complexity	1	71	(0)	2469245
17	12.2	4.0	5.8	chr22	38398524	38398573	(12419895)	+	GA-rich	Low_complexity	1	52	(0)	2469395
12	17.5	1.9	9.1	chr22	38423125	38423178	(12395290)	+	GA-rich	Low_complexity	1	55	(0)	2469455
16	36.3	1.1	3.2	chr22	38455693	38455785	(12362683)	+	(CT)n	Simple_repeat	1	94	(0)	2469533
15	18.1	3.1	7.5	chr22	38455805	38455879	(12362589)	+	(CGGCCC)n	Simple_repeat	1	71	(0)	2469534
20	3.9	0.0	0.0	chr22	38485947	38485973	(12332495)	+	(AGG)n	Simple_repeat	1	27	(0)	2469605
648	23.6	0.0	13.3	chr22	38606446	38606602	(12211866)	+	MER74A	LTR/ERVL	315	442	(116)	2469893
218	27.4	0.0	0.0	chr22	38738365	38738415	(12080053)	+	MIR1_Amn	SINE/MIR	89	139	(91)	2470187
1404	31.4	13.6	1.8	chr22	38781372	38782496	(12035972)	+	L2a	LINE/L2	2141	3426	(0)	2470256
263	28.6	7.8	2.5	chr22	38788324	38788445	(12030023)	C	Charlie18a	DNA/hAT-Charlie	(166)	176	48	2470266
21	11.7	1.9	5.7	chr22	38788455	38788506	(12029962)	+	G-rich	Low_complexity	1	53	(0)	2470267
15	21.9	0.0	5.7	chr22	38794004	38794058	(12024410)	+	(CCGC)n	Simple_repeat	1	51	(0)	2470280
559	23.3	3.1	0.2	chr22	38837114	38837248	(11981220)	C	MIR	SINE/MIR	(102)	166	24	2470376
290	31.8	5.6	4.9	chr22	38850251	38850413	(11968055)	C	MIRb	SINE/MIR	(37)	171	15	2470405
246	35.7	3.5	0.0	chr22	38850569	38850680	(11967788)	+	L2c	LINE/L2	3235	3350	(37)	2470406
15	10.9	2.1	8.3	chr22	38860352	38860398	(11958070)	+	G-rich	Low_complexity	1	48	(0)	2470425
12	19.6	2.9	0.0	chr22	38860411	38860445	(11958023)	+	G-rich	Low_complexity	1	36	(0)	2470425
19	24.6	6.8	1.1	chr22	38872227	38872314	(11946154)	+	(GCGCGC)n	Simple_repeat	1	94	(0)	2470438
2433	8.1	0.0	0.0	chr22	39099891	39100187	(11718281)	+	AluSx1	SINE/Alu	1	297	(15)	2470876
17	25.5	1.0	8.8	chr22	39205338	39205438	(11613030)	+	(ACATGC)n	Simple_repeat	1	102	(0)	2471119
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
15	18.7	3.9	3.7	chr22	39316980	39317031	(11501437)	+	(AGCGG)n	Simple_repeat	1	54	(0)	2471358
2445	10.0	0.0	0.0	chr22	39340799	39341109	(11477359)	C	AluSx1	SINE/Alu	(1)	311	1	2471426
673	27.2	11.4	9.8	chr22	39341110	39341754	(11476714)	C	L1MEi	LINE/L1	(1505)	707	53	2471425
20	9.9	8.3	4.6	chr22	39356578	39356637	(11461831)	+	GA-rich	Low_complexity	1	65	(0)	2471475
400	27.1	5.6	2.4	chr22	39356710	39356899	(11461569)	+	MIRc	SINE/MIR	2	187	(21)	2471476
13	32.3	1.6	0.0	chr22	39457998	39458058	(11360410)	+	(GCGGAG)n	Simple_repeat	1	62	(0)	2471693
452	31.1	15.5	1.6	chr22	39500997	39501307	(11317161)	+	L2	LINE/L2	2720	3081	(338)	2471782
211	33.3	7.3	6.0	chr22	39501366	39501499	(11316969)	C	MIR	SINE/MIR	(99)	163	28	2471783
13	14.7	3.3	0.0	chr22	39520440	39520469	(11297999)	+	G-rich	Low_complexity	1	31	(0)	2471815
958	30.9	6.7	3.5	chr22	39530754	39531056	(11287412)	C	L2a	LINE/L2	(434)	2985	2666	2471829
239	33.9	8.7	0.0	chr22	39531091	39531205	(11287263)	C	L2b	LINE/L2	(21)	3354	3229	2471831
12	17.3	0.0	5.6	chr22	39559817	39559852	(11258616)	+	(CCCTC)n	Simple_repeat	1	36	(0)	2471899
2016	20.4	5.4	3.6	chr22	39579949	39580141	(11238327)	C	MSTB	LTR/ERVL-MaLR	(228)	198	2	2471942
14	21.9	2.0	3.9	chr22	39635686	39635736	(11182732)	+	G-rich	Low_complexity	1	52	(0)	2472070
342	30.3	8.7	10.6	chr22	39635769	39636097	(11182371)	+	L2b	LINE/L2	3054	3375	(0)	2472071
714	23.7	0.0	0.0	chr22	40076879	40077013	(10741455)	+	FLAM_A	SINE/Alu	1	135	(7)	2472841
29	23.2	4.2	2.0	chr22	40077014	40077108	(10741360)	+	GA-rich	Low_complexity	1	99	(0)	2472842
22	15.9	1.8	3.6	chr22	40077071	40077125	(10741343)	+	G-rich	Low_complexity	1	56	(0)	2472843
585	22.7	8.9	5.3	chr22	40077228	40077455	(10741013)	C	L1MEc	LINE/L1	(6127)	960	724	2472837
268	29.4	1.4	0.0	chr22	40177344	40177425	(10641043)	+	MIRc	SINE/MIR	37	129	(139)	2473081
27	18.0	0.0	0.0	chr22	40177925	40177974	(10640494)	+	GA-rich	Low_complexity	1	50	(0)	2473082
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
2244	10.9	0.3	0.0	chr22	40652949	40653242	(10165226)	+	AluSq2	SINE/Alu	1	295	(18)	2474018
496	23.8	17.0	4.4	chr22	40653269	40653585	(10164883)	C	LTR16A1	LTR/ERVL	(91)	365	1	2474019
229	28.2	12.7	4.9	chr22	40732739	40732861	(10085607)	+	L2b	LINE/L2	3268	3424	(2)	2474230
17	9.4	2.6	5.1	chr22	41092447	41092484	(9725984)	+	(GCG)n	Simple_repeat	1	39	(0)	2475139
14	25.3	1.8	3.6	chr22	41092589	41092643	(9725825)	+	GA-rich	Low_complexity	1	56	(0)	2475140
12	21.7	0.0	0.0	chr22	41092658	41092689	(9725779)	+	(GGCCG)n	Simple_repeat	1	32	(0)	2475141
12	23.2	5.5	5.2	chr22	41367390	41367462	(9451006)	+	(TGCC)n	Simple_repeat	1	77	(0)	2475750
2046	12.0	0.3	1.3	chr22	41380146	41380454	(9438014)	C	AluSx1	SINE/Alu	(6)	306	1	2475776
276	25.1	10.2	4.4	chr22	41404270	41404419	(9414049)	+	MIR	SINE/MIR	1	158	(50)	2475827
359	31.5	4.2	6.0	chr22	41411246	41411461	(9407007)	C	MIRc	SINE/MIR	(31)	237	26	2475850
26	20.5	0.0	0.0	chr22	41413576	41413631	(9404837)	+	GA-rich	Low_complexity	1	56	(0)	2475855
289	22.6	5.3	3.4	chr22	41414353	41414462	(9404006)	+	MIR1_Amn	SINE/MIR	40	150	(118)	2475856
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
49	2.2	0.0	0.0	chr22	41561037	41561082	(9257386)	+	(CA)n	Simple_repeat	1	46	(0)	2476202
2187	10.9	0.0	1.3	chr22	41588519	41588643	(9229825)	C	AluSq2	SINE/Alu	(177)	136	12	2476269
221	25.0	6.5	0.0	chr22	41911668	41911739	(8906729)	+	L2b	LINE/L2	3072	3148	(227)	2477041
2102	10.3	5.2	0.3	chr22	41911740	41912030	(8906438)	C	AluSx1	SINE/Alu	(6)	306	1	2477042
19	20.4	0.0	6.2	chr22	41913674	41913737	(8904731)	+	G-rich	Low_complexity	1	64	(0)	2477044
28	7.9	0.0	0.0	chr22	41915070	41915109	(8903359)	+	(GCTCCG)n	Simple_repeat	1	40	(0)	2477046
187	30.5	14.1	7.9	chr22	41951350	41951488	(8866980)	+	MIRb	SINE/MIR	54	202	(66)	2477121
517	28.8	2.4	0.0	chr22	41960578	41960740	(8857728)	+	MER102b	DNA/hAT-Charlie	19	185	(156)	2477147
2418	7.3	0.0	2.9	chr22	41967273	41967586	(8850882)	+	AluY	SINE/Alu	1	305	(6)	2477167
244	27.2	12.4	8.0	chr22	42274687	42274862	(8543606)	+	L2b	LINE/L2	3189	3373	(2)	2477701
16	24.8	3.7	7.1	chr22	42299317	42299425	(8519043)	+	(CCCTCT)n	Simple_repeat	1	113	(0)	2477751
25	23.2	3.8	1.2	chr22	42299903	42299982	(8518486)	+	G-rich	Low_complexity	1	83	(0)	2477752
472	31.8	5.1	2.4	chr22	42337373	42337620	(8480848)	+	L2c	LINE/L2	2911	3165	(222)	2477827
322	34.7	4.6	1.2	chr22	42340644	42340812	(8477656)	C	MIRb	SINE/MIR	(92)	176	2	2477833
13	19.5	5.7	3.6	chr22	42340831	42340883	(8477585)	+	GA-rich	Low_complexity	1	56	(0)	2477834
231	29.2	6.1	13.9	chr22	42341669	42342042	(8476426)	C	L2b	LINE/L2	(5)	3370	3028	2477835
593	28.8	1.4	0.0	chr22	42374675	42374813	(8443655)	+	MIR	SINE/MIR	10	150	(112)	2477914
13	14.7	0.0	3.1	chr22	42374941	42374972	(8443496)	+	(GGCAG)n	Simple_repeat	1	32	(0)	2477915
878	18.2	0.7	0.0	chr22	42375102	42375255	(8443213)	C	L1MB7	LINE/L1	(17)	6167	6013	2477916
23	25.9	3.1	3.0	chr22	42425490	42425586	(8392882)	+	(CCTC)n	Simple_repeat	1	100	(0)	2478028
212	24.5	2.0	0.0	chr22	42427461	42427509	(8390959)	C	L2b	LINE/L2	(18)	3357	3308	2478029
1457	15.2	2.1	1.3	chr22	42562930	42563165	(8255303)	+	AluJr	SINE/Alu	18	255	(57)	2478380
128	17.4	0.0	0.8	chr22	42772439	42772675	(8045793)	+	(TCCCC)n	Simple_repeat	1	237	(0)	2478911
354	27.0	6.2	0.0	chr22	42939662	42939798	(7878670)	+	MIRc	SINE/MIR	37	182	(86)	2479222
195	32.8	3.0	0.0	chr22	42940341	42940404	(7878064)	+	L2c	LINE/L2	3320	3385	(2)	2479224
14	20.2	0.0	2.7	chr22	43002054	43002090	(7816378)	+	(AACA)n	Simple_repeat	1	37	(0)	2479346
2288	10.8	0.0	0.3	chr22	43031334	43031630	(7786838)	+	AluSx1	SINE/Alu	1	296	(16)	2479418
259	27.4	19.7	3.0	chr22	43031631	43031927	(7786541)	C	L2a	LINE/L2	(270)	3156	2803	2479417
291	25.0	12.5	3.5	chr22	43109608	43109723	(7708745)	C	MIRb	SINE/MIR	(50)	218	90	2479617
14	4.3	0.0	7.1	chr22	43203769	43203796	(7614672)	+	(GGGA)n	Simple_repeat	1	28	(0)	2479820
326	30.6	1.8	0.9	chr22	43231509	43231617	(7586851)	+	MIR3	SINE/MIR	64	173	(35)	2479856
388	36.7	7.8	3.2	chr22	43275455	43275857	(7542611)	C	L2b	LINE/L2	(35)	3340	2918	2479920
12	28.5	0.0	8.3	chr22	43500890	43500973	(7317495)	+	G-rich	Low_complexity	1	84	(0)	2480352
1974	7.0	2.7	14.8	chr22	43521410	43521753	(7296715)	C	AluSx	SINE/Alu	(11)	301	1	2480382
4035	23.5	1.9	9.7	chr22	43521755	43522034	(7296434)	C	L1MD3	LINE/L1	(6448)	1069	831	2480379
1783	10.1	2.0	1.6	chr22	43811037	43811283	(7007185)	+	AluSx1	SINE/Alu	44	291	(21)	2480818
60	12.7	1.9	0.9	chr22	43811284	43811390	(7007078)	+	G-rich	Low_complexity	1	109	(0)	2480819
17	21.8	0.0	0.0	chr22	43811393	43811426	(7007042)	+	A-rich	Low_complexity	1	34	(0)	2480820
647	22.0	4.8	1.5	chr22	44334308	44336239	(6482229)	+	(TG)n	Simple_repeat	1	2024	(0)	2481786
12	25.1	0.0	2.5	chr22	44336276	44336315	(6482153)	+	(CCCT)n	Simple_repeat	1	40	(0)	2481787
201	22.7	5.7	4.3	chr22	44336336	44336404	(6482064)	C	L2c	LINE/L2	(38)	3349	3280	2481788
1810	19.7	2.9	7.2	chr22	44741907	44742148	(6076320)	+	L1MB2	LINE/L1	5872	6114	(57)	2482539
27	16.5	0.0	1.8	chr22	44742182	44742238	(6076230)	+	G-rich	Low_complexity	1	57	(0)	2482541
680	11.7	0.0	0.0	chr22	44742241	44742343	(6076125)	C	L1M3	LINE/L1	(434)	5737	5635	2482542
2052	11.3	0.0	1.4	chr22	44742346	44742667	(6075801)	C	AluSc	SINE/Alu	(0)	309	1	2482543
15	10.0	2.9	2.9	chr22	45309983	45310022	(5508446)	+	(CGCTCT)n	Simple_repeat	1	40	(0)	2483679
263	33.9	10.5	4.5	chr22	45500005	45500142	(5318326)	+	L2b	LINE/L2	1964	2100	(1319)	2484070
17	21.1	4.1	0.0	chr22	45671885	45671933	(5146535)	+	(CGG)n	Simple_repeat	1	51	(0)	2484357
294	29.3	2.4	0.0	chr22	45934935	45935016	(4883452)	C	MIRb	SINE/MIR	(46)	222	139	2484757
217	29.8	6.0	1.1	chr22	45966876	45966970	(4851498)	C	L3	LINE/CR1	(55)	4044	3945	2484811
12	24.7	0.0	0.0	chr22	45977460	45977494	(4840974)	+	G-rich	Low_complexity	1	35	(0)	2484824
316	22.4	7.5	3.9	chr22	46015395	46015496	(4802972)	C	L1M5	LINE/L1	(777)	5465	5360	2484878
26	16.9	0.0	0.0	chr22	46053646	46053698	(4764770)	+	G-rich	Low_complexity	1	53	(0)	2484959
13	21.0	0.0	7.7	chr22	46053863	46053914	(4764554)	+	G-rich	Low_complexity	1	52	(0)	2484960
222	31.1	8.5	3.6	chr22	46075361	46075527	(4742941)	+	MIRb	SINE/MIR	2	177	(91)	2484975
16	18.6	9.8	0.0	chr22	46099575	46099635	(4718833)	+	G-rich	Low_complexity	1	67	(0)	2484997
326	22.0	1.6	0.0	chr22	46114799	46114881	(4703587)	C	L2c	LINE/L2	(208)	3167	3082	2485011
2253	12.0	0.0	0.0	chr22	46199722	46200022	(4618446)	C	AluSq	SINE/Alu	(12)	301	1	2485174
1709	19.4	2.0	4.0	chr22	46200246	46200599	(4617869)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	2	2485175
846	27.3	13.9	5.7	chr22	46451711	46452164	(4366304)	+	MLT1D	LTR/ERVL-MaLR	1	497	(8)	2485540
212	34.1	9.6	0.6	chr22	46798601	46798780	(4019688)	C	L2b	LINE/L2	(20)	3355	3158	2486081
13	14.6	0.0	3.1	chr22	46934918	46934949	(3883519)	+	G-rich	Low_complexity	1	32	(0)	2486249
20	12.8	2.1	4.2	chr22	46947678	46947724	(3870744)	+	(TCCC)n	Simple_repeat	1	48	(0)	2486271
6919	13.5	3.7	0.3	chr22	49766981	49768136	(1050332)	C	L1M3f	LINE/L1	(4132)	1196	1	2489732
549	24.2	7.3	2.2	chr22	49930842	49931023	(887445)	C	ERV3-16A3_I-int	LTR/ERVL	(2318)	2908	2717	2489979
1329	29.4	9.9	8.6	chr22	49931029	49931425	(887043)	C	ERV3-16A3_I-int	LTR/ERVL	(2611)	2615	2193	2489979
13	12.2	2.4	7.1	chr22	49993464	49993504	(824964)	+	G-rich	Low_complexity	1	42	(0)	2490045
13	20.4	3.6	5.2	chr22	50271781	50271836	(546632)	+	(CCGCGG)n	Simple_repeat	1	58	(0)	2490390
86	15.6	7.8	1.9	chr22	50307696	50307937	(510531)	+	G-rich	Low_complexity	1	261	(0)	2490424
477	25.8	4.1	1.9	chr22	50397378	50397550	(420918)	+	HAL1	LINE/L1	2211	2398	(109)	2490614
13	20.0	0.0	6.5	chr22	50506583	50506628	(311840)	+	(CCCACC)n	Simple_repeat	1	46	(0)	2490777
17	17.7	0.0	0.0	chr22	50526098	50526135	(292333)	+	(CAGCGC)n	Simple_repeat	1	38	(0)	2490809
14	24.1	8.1	2.1	chr22	50526145	50526230	(292238)	+	G-rich	Low_complexity	1	93	(0)	2490810
12	6.7	9.1	2.8	chr22	50701343	50701349	(117119)	+	(CCCTT)n	Simple_repeat	1	35	(0)	2491102
12	9.5	0.0	4.0	chr22	50701350	50701374	(117094)	+	(CCCT)n	Simple_repeat	1	25	(0)	2491103
16	0.0	0.0	0.0	chr3	3800140	3800156	(194495403)	+	(A)n	Simple_repeat	1	17	(0)	2498048
1616	18.9	11.0	3.5	chr3	4320355	4320995	(193974564)	C	LTR48	LTR/ERV1	(2)	785	1	2498802
6334	15.5	4.1	9.4	chr3	4321012	4322473	(193973086)	+	L1MC3	LINE/L1	6380	7761	(24)	2498799
29	17.9	3.8	2.4	chr3	4493401	4493479	(193802080)	+	GA-rich	Low_complexity	1	82	(0)	2499109
1838	13.4	19.7	0.6	chr3	4568785	4569128	(193726431)	C	MSTA	LTR/ERVL-MaLR	(0)	428	3	2499242
2255	10.0	0.0	0.3	chr3	4743830	4744129	(193551430)	C	AluSx1	SINE/Alu	(7)	305	7	2499527
14	8.8	0.0	0.0	chr3	5013558	5013581	(193281978)	+	(CTCC)n	Simple_repeat	1	24	(0)	2499976
50	15.1	2.0	1.0	chr3	5013694	5013791	(193281768)	+	(CTC)n	Simple_repeat	1	100	(0)	2499977
212	37.2	7.7	2.2	chr3	9173433	9173616	(189121943)	C	L2b	LINE/L2	(79)	3296	3102	2506652
218	28.0	8.6	0.0	chr3	9173616	9173722	(189121837)	+	L2b	LINE/L2	3001	3117	(258)	2506653
13	17.9	2.4	4.7	chr3	9403059	9403100	(188892459)	+	GA-rich	Low_complexity	1	43	(0)	2507138
12	12.5	0.0	3.6	chr3	9551326	9551353	(188744206)	+	(CTCCC)n	Simple_repeat	1	28	(0)	2507424
826	31.5	1.5	1.1	chr3	9554104	9554363	(188741196)	+	MamTip2	DNA/hAT-Tip100	45	305	(0)	2507428
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
211	29.6	4.1	0.0	chr3	9733036	9733106	(188562453)	+	L2c	LINE/L2	3313	3386	(1)	2507839
17	10.4	7.0	2.2	chr3	9769950	9769992	(188525567)	+	(GGCTC)n	Simple_repeat	1	46	(0)	2507909
309	26.2	9.3	0.0	chr3	9770151	9770257	(188525302)	C	MIRb	SINE/MIR	(118)	150	33	2507910
218	29.4	1.4	0.0	chr3	9843325	9843392	(188452167)	C	MIRc	SINE/MIR	(154)	114	46	2508086
325	31.9	9.4	1.2	chr3	9899073	9899237	(188396322)	+	MIRb	SINE/MIR	85	264	(4)	2508206
77	23.6	1.0	2.5	chr3	9899430	9899631	(188395928)	+	(TTCC)n	Simple_repeat	1	204	(0)	2508207
27	0.0	2.6	5.1	chr3	9952144	9952181	(188343378)	+	(CTC)n	Simple_repeat	1	39	(0)	2508332
228	27.5	4.8	3.0	chr3	10010436	10010567	(188284992)	+	L2a	LINE/L2	3104	3249	(177)	2508459
185	25.0	2.0	2.0	chr3	10010636	10010684	(188284875)	+	L2a	LINE/L2	3377	3425	(1)	2508459
182	25.9	6.5	0.0	chr3	10287121	10287178	(188008381)	C	MamTip2	DNA/hAT-Tip100	(144)	161	100	2509127
20	18.1	4.5	2.9	chr3	10287236	10287301	(188008258)	+	(CTCTTTCT)n	Simple_repeat	1	69	(0)	2509128
1785	17.5	4.4	2.8	chr3	10302712	10303110	(187992449)	+	L1MB2	LINE/L1	5667	6072	(99)	2509155
66	29.1	3.3	0.0	chr3	10319816	10320028	(187975531)	+	GA-rich	Low_complexity	1	220	(0)	2509186
417	39.1	11.5	0.2	chr3	10398177	10398601	(187896958)	C	L3	LINE/CR1	(952)	3147	2669	2509327
44	2.4	0.0	0.0	chr3	10471365	10471406	(187824153)	+	(TG)n	Simple_repeat	1	42	(0)	2509477
18	15.7	0.0	5.0	chr3	10471407	10471453	(187824106)	+	(GT)n	Simple_repeat	1	44	(0)	2509478
674	19.9	0.7	4.1	chr3	10471644	10471790	(187823769)	+	L1MA7	LINE/L1	6148	6289	(2)	2509479
442	27.0	13.2	3.2	chr3	10945486	10945703	(187349856)	C	MIRb	SINE/MIR	(15)	253	11	2510416
222	22.5	0.0	0.0	chr3	11131587	11131626	(187163933)	C	MIR1_Amn	SINE/MIR	(162)	68	29	2510814
4174	4.0	0.4	0.0	chr3	11131821	11132301	(187163258)	+	LTR2B	LTR/ERV1	1	483	(0)	2510815
15	13.3	2.8	2.7	chr3	11496404	11496439	(186799120)	+	(TCCC)n	Simple_repeat	1	37	(0)	2511557
265	33.1	8.8	0.0	chr3	11561670	11561776	(186733783)	C	MIR3	SINE/MIR	(55)	153	35	2511671
17	4.3	0.0	0.0	chr3	11691155	11691178	(186604381)	+	(GTT)n	Simple_repeat	1	24	(0)	2511875
13	19.6	4.0	3.9	chr3	11719645	11719694	(186575865)	+	(AGGCC)n	Simple_repeat	1	52	(0)	2511933
23	18.2	6.3	0.0	chr3	12187735	12187752	(186107807)	+	(TTTG)n	Simple_repeat	1	64	(0)	2512828
22	16.1	2.4	0.0	chr3	12187753	12187794	(186107765)	+	(GT)n	Simple_repeat	1	43	(0)	2512829
448	31.3	12.4	3.1	chr3	12443253	12444021	(185851538)	C	L2c	LINE/L2	(183)	3204	2350	2513262
16	10.0	2.9	2.8	chr3	12590977	12591011	(185704548)	+	G-rich	Low_complexity	1	36	(0)	2513595
13	20.9	0.0	0.0	chr3	12591071	12591103	(185704456)	+	(CCAGCC)n	Simple_repeat	1	33	(0)	2513596
51	26.6	1.2	4.0	chr3	12773160	12773298	(185522261)	+	G-rich	Low_complexity	1	138	(0)	2514075
2281	16.9	6.5	0.5	chr3	12773299	12773731	(185521828)	C	LOR1b	LTR/ERV1	(0)	461	1	2514076
346	31.4	6.0	2.7	chr3	13122030	13122459	(185173100)	C	L2a	LINE/L2	(96)	3279	2786	2514689
28	15.7	7.0	0.0	chr3	13122461	13122531	(185173028)	+	G-rich	Low_complexity	1	76	(0)	2514690
2265	19.0	5.4	3.6	chr3	13262529	13262993	(185032566)	+	L1MB3	LINE/L1	5610	6100	(83)	2514925
1635	16.5	0.4	0.8	chr3	13262994	13263248	(185032311)	+	AluSz6	SINE/Alu	29	282	(30)	2514926
519	33.5	2.7	0.0	chr3	13391405	13391583	(184903976)	C	MIRb	SINE/MIR	(81)	187	4	2515143
628	28.6	1.1	6.9	chr3	13547205	13547257	(184748302)	C	MIR	SINE/MIR	(2)	260	209	2515488
2373	14.0	0.3	0.8	chr3	13547258	13547625	(184747934)	+	MER47A	DNA/TcMar-Tigger	1	366	(0)	2515489
584	24.9	14.7	4.4	chr3	13595825	13596139	(184699420)	C	L1ME4b	LINE/L1	(15)	877	525	2515585
13	8.1	3.6	3.5	chr3	14178454	14178481	(184117078)	+	(CCT)n	Simple_repeat	1	29	(0)	2516418
219	29.0	2.5	1.0	chr3	14452204	14452299	(183843260)	+	MIRb	SINE/MIR	47	146	(122)	2516986
252	26.9	5.6	3.6	chr3	14563380	14563518	(183732041)	C	L2a	LINE/L2	(253)	3173	3032	2517197
438	27.5	4.8	0.6	chr3	14607266	14607491	(183688068)	+	Charlie7	DNA/hAT-Charlie	33	272	(0)	2517298
1034	25.5	12.7	2.5	chr3	14780922	14781315	(183514244)	+	MLT1J2	LTR/ERVL-MaLR	1	440	(8)	2517586
499	21.1	9.2	0.1	chr3	14826124	14826263	(183469296)	C	L1ME2z	LINE/L1	(3)	6441	6318	2517674
663	26.3	14.9	0.5	chr3	14826429	14826646	(183468913)	+	MIR	SINE/MIR	8	262	(0)	2517675
16	10.8	3.3	0.0	chr3	14948240	14948269	(183347290)	+	(CTC)n	Simple_repeat	1	31	(0)	2517905
204	37.0	4.7	0.0	chr3	14989143	14989223	(183306336)	+	MIR3	SINE/MIR	33	117	(91)	2517983
282	22.8	8.0	7.9	chr3	15064479	15064648	(183230911)	+	MIR	SINE/MIR	60	246	(22)	2518110
1686	17.4	0.4	1.1	chr3	15185266	15185535	(183110024)	+	AluJr	SINE/Alu	1	268	(44)	2518342
29	0.0	3.2	0.0	chr3	15185537	15185567	(183109992)	+	(GGGAAG)n	Simple_repeat	1	32	(0)	2518343
32	14.0	3.8	3.7	chr3	15185569	15185647	(183109912)	+	A-rich	Low_complexity	1	82	(0)	2518344
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
16	5.2	0.0	0.0	chr3	18423743	18423762	(179871797)	+	(A)n	Simple_repeat	1	20	(0)	2523264
14	18.1	5.4	5.1	chr3	18425215	18425220	(179870339)	+	(CCG)n	Simple_repeat	1	57	(0)	2523270
15	25.6	2.0	0.0	chr3	18425221	18425271	(179870288)	+	(GCCCGCA)n	Simple_repeat	1	52	(0)	2523271
27	20.5	3.3	4.3	chr3	18425323	18425413	(179870146)	+	GA-rich	Low_complexity	1	94	(0)	2523272
13	18.2	0.0	0.0	chr3	18425482	18425512	(179870047)	+	G-rich	Low_complexity	1	31	(0)	2523273
20	30.1	2.4	4.2	chr3	18425756	18425861	(179869698)	+	G-rich	Low_complexity	1	104	(0)	2523274
18	15.9	0.0	0.0	chr3	18444724	18444758	(179850801)	+	(GCC)n	Simple_repeat	1	35	(0)	2523289
19	3.3	3.0	2.9	chr3	18444826	18444858	(179850701)	+	(GAGC)n	Simple_repeat	1	34	(0)	2523290
34	29.0	0.7	4.6	chr3	18444859	18444970	(179850589)	+	G-rich	Low_complexity	6	151	(0)	2523291
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
15	17.5	0.0	0.0	chr3	20040242	20040274	(178255285)	+	(GCCGCC)n	Simple_repeat	1	33	(0)	2525556
13	19.3	2.2	4.3	chr3	20054973	20055017	(178240542)	+	(GAATGAA)n	Simple_repeat	1	46	(0)	2525593
396	27.2	12.0	0.0	chr3	20055133	20055257	(178240302)	+	MIR	SINE/MIR	13	154	(108)	2525594
15008	11.2	10.3	1.0	chr3	23019620	23021447	(175274112)	+	L1PB1	LINE/L1	4	1960	(4903)	2529544
15	31.8	0.0	2.7	chr3	23203579	23203651	(175091908)	+	(CGTGCCC)n	Simple_repeat	1	73	(0)	2529844
186	31.5	2.7	1.4	chr3	23740536	23740609	(174554950)	C	OldhAT1	DNA/hAT-Ac	(274)	2574	2500	2530663
1723	14.2	6.5	2.0	chr3	23740798	23741092	(174554467)	C	AluJb	SINE/Alu	(3)	309	1	2530664
367	28.4	15.7	5.9	chr3	23744251	23744605	(174550954)	+	MamGypLTR1c	LTR/Gypsy	340	735	(68)	2530668
22	25.7	0.0	5.1	chr3	23746713	23746791	(174548768)	+	(CCCT)n	Simple_repeat	1	79	(0)	2530672
730	25.2	19.1	1.6	chr3	23915502	23916073	(174379486)	+	L2a	LINE/L2	2731	3426	(0)	2531001
24	32.4	2.1	4.1	chr3	23945008	23945149	(174350410)	+	GA-rich	Low_complexity	1	145	(0)	2531073
198	20.9	0.0	0.0	chr3	23993490	23993532	(174302027)	C	L3	LINE/CR1	(6)	4093	4051	2531159
706	28.3	18.0	2.2	chr3	23993563	23993891	(174301668)	C	LTR16E1	LTR/ERVL	(5)	533	132	2531160
418	28.7	8.8	0.6	chr3	24399684	24399847	(173895712)	C	MIR3	SINE/MIR	(26)	182	7	2531817
14	0.0	0.0	0.0	chr3	25664850	25664867	(172630692)	+	(GCC)n	Simple_repeat	1	18	(0)	2533626
14	15.3	0.0	0.0	chr3	27369307	27369335	(170926224)	+	(GTCCC)n	Simple_repeat	1	29	(0)	2535958
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
24	19.1	3.2	1.5	chr3	33114003	33114065	(165181494)	+	(CCTT)n	Simple_repeat	1	65	(0)	2545324
16	0.0	0.0	0.0	chr3	33219337	33219354	(165076205)	+	(T)n	Simple_repeat	1	18	(0)	2545513
15	14.8	2.6	2.5	chr3	36380394	36380432	(161915127)	+	(GGCGG)n	Simple_repeat	1	40	(0)	2549821
12	16.9	8.3	1.9	chr3	36380462	36380509	(161915050)	+	G-rich	Low_complexity	1	52	(0)	2549822
258	31.8	1.2	0.0	chr3	39385664	39385748	(158909811)	C	L2b	LINE/L2	(4)	3371	3286	2554430
253	33.3	0.8	5.4	chr3	42117205	42117334	(156178225)	C	MIR3	SINE/MIR	(61)	147	24	2558588
12	10.1	9.4	0.0	chr3	42117416	42117447	(156178112)	+	(TCCTC)n	Simple_repeat	1	35	(0)	2558589
589	30.3	1.4	3.5	chr3	42713434	42713720	(155581839)	C	HAL1	LINE/L1	(1)	2506	2226	2559526
316	20.8	4.5	6.2	chr3	43097305	43097332	(155198227)	C	MER102b	DNA/hAT-Charlie	(147)	194	170	2560129
888	17.0	16.9	18.2	chr3	43097333	43097728	(155197831)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2560130
16	0.0	0.0	0.0	chr3	45210765	45210782	(153084777)	+	(CT)n	Simple_repeat	1	18	(0)	2563443
16	16.8	0.0	0.0	chr3	45210793	45210820	(153084739)	+	(GT)n	Simple_repeat	1	28	(0)	2563444
324	26.9	11.9	0.7	chr3	45210923	45211064	(153084495)	+	MIR	SINE/MIR	28	187	(75)	2563445
747	29.1	7.0	2.1	chr3	45211073	45211510	(153084049)	C	LTR16C	LTR/ERVL	(9)	529	1	2563446
14	19.1	0.0	2.6	chr3	45388444	45388481	(152907078)	+	(GCCCC)n	Simple_repeat	1	38	(0)	2563751
222	28.9	0.0	4.2	chr3	45618278	45618372	(152677187)	C	L2a	LINE/L2	(1)	3425	3299	2564162
14	8.9	0.0	0.0	chr3	46882670	46882693	(151412866)	+	(GGGA)n	Simple_repeat	1	24	(0)	2566056
16	14.2	0.0	0.0	chr3	46882749	46882779	(151412780)	+	(AGAC)n	Simple_repeat	1	31	(0)	2566057
1342	13.0	0.0	2.0	chr3	46969333	46969532	(151326027)	C	AluJo	SINE/Alu	(116)	196	1	2566193
15	26.8	0.0	0.0	chr3	47163892	47163936	(151131623)	+	(CTGCGG)n	Simple_repeat	1	45	(0)	2566541
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
17	24.5	1.5	4.3	chr3	47164059	47164126	(151131433)	+	(TCCC)n	Simple_repeat	1	69	(0)	2566543
12	11.6	3.3	3.2	chr3	47421123	47421152	(150874407)	+	(GGCAG)n	Simple_repeat	1	31	(0)	2567105
51	0.0	0.0	0.0	chr3	47443234	47443277	(150852282)	+	(AC)n	Simple_repeat	1	44	(0)	2567144
32	2.7	0.0	0.0	chr3	47443278	47443315	(150852244)	+	(TC)n	Simple_repeat	1	38	(0)	2567145
15	12.6	0.0	0.0	chr3	48694946	48694972	(149600587)	+	(AGG)n	Simple_repeat	1	27	(0)	2569717
22	21.8	1.7	1.6	chr3	49007905	49007964	(149287595)	+	GA-rich	Low_complexity	1	61	(0)	2570463
19	19.1	1.7	5.0	chr3	49554469	49554527	(148741032)	+	(GCG)n	Simple_repeat	1	60	(0)	2571617
16	24.8	5.7	0.0	chr3	49668413	49668465	(148627094)	+	(TC)n	Simple_repeat	1	56	(0)	2571779
12	15.8	0.0	3.3	chr3	49869297	49869326	(148426233)	+	(CCCCG)n	Simple_repeat	1	30	(0)	2572129
2490	7.7	0.0	0.3	chr3	49986313	49986624	(148308935)	+	AluY	SINE/Alu	1	311	(0)	2572383
29	2.7	2.5	2.4	chr3	49986701	49986740	(148308819)	+	(TCTCT)n	Simple_repeat	1	41	(0)	2572384
21	6.7	0.0	0.0	chr3	49986744	49986775	(148308784)	+	(CTCCC)n	Simple_repeat	1	32	(0)	2572385
1845	16.8	2.0	0.0	chr3	49986780	49987070	(148308489)	C	AluJb	SINE/Alu	(2)	310	14	2572386
43	16.1	4.0	1.0	chr3	50157319	50157417	(148138142)	+	(CTCC)n	Simple_repeat	1	103	(0)	2572714
12	8.4	0.0	6.9	chr3	50165180	50165208	(148130351)	+	G-rich	Low_complexity	1	29	(0)	2572723
15	7.8	0.0	6.5	chr3	50166843	50166873	(148128686)	+	(GGA)n	Simple_repeat	1	31	(0)	2572725
14	19.4	4.9	0.0	chr3	50344783	50344823	(147950736)	+	(CCCT)n	Simple_repeat	1	43	(0)	2572932
19	10.6	0.0	8.3	chr3	50344824	50344834	(147950725)	+	(CTCCC)n	Simple_repeat	4	50	(0)	2572933
18	6.8	3.2	0.0	chr3	50373117	50373147	(147922412)	+	(AAAACA)n	Simple_repeat	1	32	(0)	2572963
465	26.7	14.6	1.1	chr3	50431450	50431638	(147863921)	+	MIRb	SINE/MIR	4	222	(46)	2573034
461	32.6	7.2	0.7	chr3	50649897	50650128	(147645431)	+	MIRb	SINE/MIR	20	259	(3)	2573341
8289	20.4	3.0	2.2	chr3	50912198	50914041	(147381518)	C	L1M1	LINE/L1	(5696)	1869	11	2573718
228	31.3	16.0	1.7	chr3	52063360	52063707	(146231852)	+	L2	LINE/L2	2676	3082	(337)	2575397
58	7.6	1.2	0.0	chr3	52220335	52220418	(146075141)	+	(GGAG)n	Simple_repeat	1	85	(0)	2575602
2160	9.2	2.7	0.0	chr3	52244585	52244868	(146050691)	C	AluSz	SINE/Alu	(20)	292	1	2575637
92	29.9	1.6	4.1	chr3	52410122	52410550	(145885009)	+	G-rich	Low_complexity	1	436	(0)	2575858
19	19.5	2.1	0.0	chr3	52533909	52533955	(145761604)	+	G-rich	Low_complexity	1	48	(0)	2575997
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
28	24.1	0.0	0.0	chr3	55485487	55485549	(142810010)	+	(AC)n	Simple_repeat	1	63	(0)	2580515
15	31.8	1.6	0.0	chr3	55488317	55488378	(142807181)	+	(TCCC)n	Simple_repeat	1	63	(0)	2580520
22	18.4	0.0	0.0	chr3	55488411	55488449	(142807110)	+	A-rich	Low_complexity	1	39	(0)	2580521
38	7.0	0.0	0.0	chr3	55489279	55489324	(142806235)	+	(AC)n	Simple_repeat	1	46	(0)	2580523
280	27.7	14.2	4.8	chr3	56447165	56447437	(141848122)	+	MamGypLTR3	LTR/Gypsy	478	780	(114)	2582146
27	13.9	3.6	0.0	chr3	56468325	56468380	(141827179)	+	(GGAGCC)n	Simple_repeat	1	58	(0)	2582184
14	7.2	0.0	8.6	chr3	56468451	56468485	(141827074)	+	G-rich	Low_complexity	1	35	(0)	2582185
30	5.5	0.0	0.0	chr3	57016995	57017032	(141278527)	+	(CT)n	Simple_repeat	1	38	(0)	2583180
38	0.0	0.0	0.0	chr3	57017033	57017065	(141278494)	+	(CA)n	Simple_repeat	1	33	(0)	2583181
16	12.6	8.6	0.0	chr3	57060824	57060858	(141234701)	+	(AC)n	Simple_repeat	1	38	(0)	2583283
2092	11.9	1.1	0.0	chr3	58024733	58025010	(140270549)	C	AluSc	SINE/Alu	(28)	281	1	2585216
16	0.0	0.0	0.0	chr3	58025015	58025032	(140270527)	+	(T)n	Simple_repeat	1	18	(0)	2585217
21	28.9	1.2	2.3	chr3	58025060	58025118	(140270441)	+	(TTTCT)n	Simple_repeat	1	59	(0)	2585218
2102	16.1	0.0	0.0	chr3	58025119	58025429	(140270130)	C	AluJb	SINE/Alu	(1)	311	1	2585219
29	12.5	0.0	0.0	chr3	58581995	58582046	(139713513)	+	(TG)n	Simple_repeat	1	52	(0)	2586290
820	20.2	3.2	0.5	chr3	58582122	58582305	(139713254)	+	MER53	DNA/hAT	5	193	(0)	2586291
487	22.6	11.6	0.0	chr3	61236553	61236689	(137058870)	C	MIR3	SINE/MIR	(11)	197	43	2590201
2101	22.0	10.7	13.2	chr3	61531013	61531888	(136763671)	+	LTR102_Mam	LTR/ERVL	1	851	(0)	2590763
15	6.9	0.0	8.3	chr3	61561751	61561786	(136733773)	+	(CTCCC)n	Simple_repeat	1	36	(0)	2590828
15	22.1	1.7	5.1	chr3	61561850	61561907	(136733652)	+	(CGCCG)n	Simple_repeat	1	59	(0)	2590829
316	26.7	11.4	3.3	chr3	61579526	61579645	(136715914)	C	MIRb	SINE/MIR	(112)	156	26	2590851
438	27.0	1.9	1.3	chr3	61768524	61768677	(136526882)	+	MER103C	DNA/hAT-Charlie	6	160	(137)	2591208
28	0.0	0.0	0.0	chr3	61869557	61869583	(136425976)	+	(CCCTC)n	Simple_repeat	1	27	(0)	2591369
1618	19.4	4.3	0.0	chr3	61869599	61869747	(136425812)	C	AluJb	SINE/Alu	(32)	280	132	2591370
306	25.5	11.3	2.1	chr3	62084744	62084887	(136210672)	+	L2c	LINE/L2	3188	3346	(41)	2591737
926	18.1	3.3	7.7	chr3	62131108	62131328	(136164231)	C	MER20	DNA/hAT-Charlie	(8)	211	1	2591806
18	21.2	1.5	5.9	chr3	63975883	63975949	(134319610)	+	(TGTC)n	Simple_repeat	1	68	(0)	2594981
353	28.1	11.9	7.2	chr3	64189485	64189691	(134105868)	+	MIRb	SINE/MIR	15	232	(36)	2595287
936	22.7	11.6	0.0	chr3	64342921	64343118	(133952441)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	2595554
15	24.8	0.0	2.2	chr3	64650471	64650531	(133645028)	+	A-rich	Low_complexity	1	59	(0)	2596080
17	20.1	3.9	3.8	chr3	64650508	64650558	(133645001)	+	GA-rich	Low_complexity	1	53	(0)	2596081
22	22.9	8.4	2.6	chr3	64688372	64688478	(133607081)	+	(CT)n	Simple_repeat	1	116	(0)	2596147
23	26.1	3.6	4.3	chr3	65549262	65549372	(132746187)	+	(CTCC)n	Simple_repeat	1	115	(0)	2597590
66	21.2	3.4	2.2	chr3	66493824	66494040	(131801519)	+	A-rich	Low_complexity	1	219	(0)	2599284
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
12	19.6	0.0	0.0	chr3	67654708	67654736	(130640823)	+	(GGCCG)n	Simple_repeat	1	29	(0)	2601161
26	23.6	2.7	0.0	chr3	69080384	69080458	(129215101)	+	G-rich	Low_complexity	1	77	(0)	2603415
261	30.8	3.2	3.2	chr3	69237031	69237154	(129058405)	C	MIR3	SINE/MIR	(46)	162	39	2603744
19	12.1	0.0	4.9	chr3	69542707	69542747	(128752812)	+	G-rich	Low_complexity	1	41	(0)	2604353
546	32.6	2.2	6.0	chr3	71495875	71496153	(126799406)	C	MER102c	DNA/hAT-Charlie	(32)	299	38	2607317
17	15.3	0.0	0.0	chr3	71578070	71578098	(126717461)	+	A-rich	Low_complexity	1	29	(0)	2607445
17	8.8	2.5	4.9	chr3	71582285	71582324	(126713235)	+	G-rich	Low_complexity	1	41	(0)	2607449
12	25.1	1.8	5.2	chr3	71582370	71582426	(126713133)	+	(CCG)n	Simple_repeat	1	58	(0)	2607450
12	22.1	0.0	0.0	chr3	71583359	71583390	(126712169)	+	GA-rich	Low_complexity	1	32	(0)	2607452
30	19.1	0.0	0.0	chr3	71583424	71583478	(126712081)	+	(T)n	Simple_repeat	1	55	(0)	2607453
13	22.1	0.0	0.0	chr3	71583468	71583499	(126712060)	+	(TTG)n	Simple_repeat	1	32	(0)	2607454
65	14.8	3.8	3.7	chr3	72279157	72279313	(126016246)	+	GA-rich	Low_complexity	1	163	(0)	2608847
51	18.6	5.0	5.8	chr3	72279881	72280078	(126015481)	+	GA-rich	Low_complexity	1	208	(0)	2608848
35	31.9	4.3	1.8	chr3	73188740	73188900	(125106659)	+	(TCT)n	Simple_repeat	1	168	(0)	2610786
191	28.8	4.3	0.0	chr3	73300244	73300310	(124995249)	C	MIR	SINE/MIR	(10)	258	190	2610988
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
3486	27.1	11.6	4.1	chr3	78161992	78163760	(120131799)	C	HAL1	LINE/L1	(378)	2129	192	2617754
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
447	22.7	3.5	0.9	chr3	94063363	94063473	(104232086)	+	L2a	LINE/L2	3313	3426	(0)	2633774
194	35.2	11.9	3.8	chr3	97993347	97993585	(100301974)	C	L3b	LINE/CR1	(82)	5150	4890	2638478
323	36.5	6.6	2.5	chr3	98890966	98891125	(99404434)	C	L2b	LINE/L2	(18)	3357	3191	2639586
22	17.3	0.0	0.0	chr3	98891140	98891178	(99404381)	+	(GT)n	Simple_repeat	1	39	(0)	2639587
33	18.4	0.0	0.0	chr3	98891178	98891241	(99404318)	+	GA-rich	Low_complexity	1	64	(0)	2639588
20	18.9	2.1	0.0	chr3	98891216	98891263	(99404296)	+	A-rich	Low_complexity	1	49	(0)	2639589
12	7.4	0.0	11.1	chr3	98891289	98891324	(99404235)	+	GA-rich	Low_complexity	1	36	(0)	2639590
29	0.0	0.0	0.0	chr3	101513214	101513245	(96782314)	+	(A)n	Simple_repeat	1	32	(0)	2643091
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
694	26.0	2.5	9.3	chr3	107239759	107240102	(91055457)	+	L1MC4	LINE/L1	7484	7803	(239)	2650542
667	11.8	3.2	3.2	chr3	107240198	107240320	(91055239)	+	MER20	DNA/hAT-Charlie	43	165	(54)	2650543
285	14.6	1.8	0.0	chr3	107240352	107240406	(91055153)	+	MER20	DNA/hAT-Charlie	164	219	(0)	2650544
16	28.2	0.0	0.0	chr3	107524609	107524648	(90770911)	+	GA-rich	Low_complexity	1	40	(0)	2651003
17	21.7	3.2	3.1	chr3	107524789	107524850	(90770709)	+	(GGTGG)n	Simple_repeat	1	64	(0)	2651004
34	17.1	0.0	0.0	chr3	107525317	107525378	(90770181)	+	GA-rich	Low_complexity	1	62	(0)	2651005
227	25.7	11.1	1.9	chr3	111851808	111851962	(86443597)	+	L2c	LINE/L2	2917	3087	(300)	2657048
424	31.8	8.9	2.5	chr3	113148708	113148907	(85146652)	+	MIRb	SINE/MIR	16	229	(39)	2658810
17	4.9	0.0	0.0	chr3	113151735	113151755	(85143804)	+	(A)n	Simple_repeat	1	21	(0)	2658815
27	13.1	2.0	0.0	chr3	113211448	113211497	(85084062)	+	(CTC)n	Simple_repeat	1	51	(0)	2658907
190	26.9	2.9	1.5	chr3	113745275	113745342	(84550217)	C	AmnSINE1	SINE/5S-Deu-L2	(417)	158	90	2659670
16	21.7	0.0	0.0	chr3	114451206	114451237	(83844322)	+	A-rich	Low_complexity	1	32	(0)	2660760
66	18.3	2.9	0.7	chr3	114454074	114454211	(83841348)	+	GA-rich	Low_complexity	1	142	(0)	2660762
107	22.7	2.0	0.4	chr3	114454929	114455183	(83840376)	+	GA-rich	Low_complexity	1	260	(0)	2660764
67	19.0	2.7	0.7	chr3	115100328	115100474	(83195085)	+	GA-rich	Low_complexity	1	151	(0)	2661646
13	26.9	1.8	3.5	chr3	115147777	115147833	(83147726)	+	(CTC)n	Simple_repeat	1	58	(0)	2661720
26	23.7	4.1	6.5	chr3	115623333	115623479	(82672080)	+	GA-rich	Low_complexity	1	153	(0)	2662366
199	26.4	9.0	8.1	chr3	119468658	119468756	(78826803)	+	MIRc	SINE/MIR	34	133	(135)	2667627
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
19	0.0	0.0	0.0	chr3	120094385	120094408	(78201151)	+	(GGC)n	Simple_repeat	1	24	(0)	2668617
19	18.3	0.0	5.5	chr3	120094480	120094485	(78201074)	+	(TCCCCC)n	Simple_repeat	1	54	(0)	2668618
22	11.7	4.2	2.0	chr3	120094486	120094533	(78201026)	+	(CTC)n	Simple_repeat	1	50	(0)	2668619
13	15.9	1.4	12.3	chr3	120908723	120908794	(77386765)	+	(GCGGCG)n	Simple_repeat	1	73	(0)	2669852
26	25.8	2.5	4.8	chr3	120908767	120908887	(77386672)	+	G-rich	Low_complexity	1	124	(0)	2669853
367	26.1	5.5	4.4	chr3	122679277	122679436	(75616123)	+	LTR84a	LTR/ERVL	512	673	(84)	2672445
2165	11.2	0.7	0.0	chr3	122999230	122999524	(75296035)	C	AluSq2	SINE/Alu	(16)	297	1	2672947
12	4.3	8.3	0.0	chr3	123028314	123028337	(75267222)	+	(GGCTG)n	Simple_repeat	1	26	(0)	2673002
395	19.4	0.0	0.0	chr3	123028393	123028459	(75267100)	+	MIRb	SINE/MIR	113	179	(89)	2673003
349	24.7	24.5	3.3	chr3	123075230	123075710	(75219849)	C	L2	LINE/L2	(1010)	2409	1794	2673109
1027	19.8	14.2	3.8	chr3	123365944	123366232	(74929327)	+	MER33	DNA/hAT-Charlie	1	324	(0)	2673581
292	35.1	3.9	2.8	chr3	123431730	123431905	(74863654)	C	Mam_R4	LINE/Dong-R4	(653)	3156	2979	2673687
246	21.3	4.7	0.0	chr3	123431916	123431976	(74863583)	C	MER5B	DNA/hAT-Charlie	(0)	178	115	2673688
2040	14.0	1.6	0.7	chr3	123432518	123432825	(74862734)	C	AluJr	SINE/Alu	(0)	312	2	2673689
2265	8.7	1.2	2.6	chr3	123936500	123936843	(74358716)	+	L1PA14	LINE/L1	5806	6144	(17)	2674530
3650	22.0	9.1	2.4	chr3	123936844	123938647	(74356912)	C	L1ME1	LINE/L1	(131)	6048	4101	2674529
20	10.1	0.0	0.0	chr3	124033192	124033223	(74262336)	+	(GGC)n	Simple_repeat	1	32	(0)	2674684
47	22.1	1.7	0.0	chr3	124033219	124033333	(74262226)	+	GA-rich	Low_complexity	1	117	(0)	2674685
288	27.5	13.2	1.4	chr3	124468592	124468731	(73826828)	C	MIR3	SINE/MIR	(1)	207	49	2675330
714	28.2	11.9	0.0	chr3	124772323	124772595	(73522964)	+	Tigger19a	DNA/TcMar-Tigger	1	310	(13)	2675836
355	28.3	8.6	2.1	chr3	125054680	125054820	(73240739)	C	MIRc	SINE/MIR	(30)	238	88	2676356
11	24.6	0.0	2.5	chr3	125056202	125056241	(73239318)	+	G-rich	Low_complexity	1	40	(0)	2676358
20	12.0	0.0	2.6	chr3	125357252	125357289	(72938270)	+	(CTC)n	Simple_repeat	1	38	(0)	2676846
18	15.7	4.7	0.0	chr3	125357301	125357343	(72938216)	+	(CGCA)n	Simple_repeat	1	45	(0)	2676847
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
13	20.3	2.4	2.3	chr3	125595688	125595729	(72699830)	+	G-rich	Low_complexity	1	43	(0)	2677363
16	13.3	0.0	5.4	chr3	126968470	126968506	(71327053)	+	GA-rich	Low_complexity	1	37	(0)	2679341
231	28.6	13.5	3.5	chr3	126968573	126968763	(71326796)	C	L2a	LINE/L2	(50)	3376	3179	2679342
12	7.5	6.7	3.1	chr3	127002441	127002470	(71293089)	+	(GCCCT)n	Simple_repeat	1	32	(0)	2679383
15	23.1	1.6	4.8	chr3	127547478	127547538	(70748021)	+	G-rich	Low_complexity	1	62	(0)	2680226
89	19.5	2.2	2.6	chr3	127547665	127547888	(70747671)	+	(CCCCT)n	Simple_repeat	1	229	(0)	2680227
468	25.0	12.3	1.8	chr3	127591295	127591461	(70704098)	C	MIRb	SINE/MIR	(81)	187	1	2680326
497	22.0	10.6	10.1	chr3	128194667	128194974	(70100585)	+	L1ME4a	LINE/L1	5805	6114	(10)	2681353
12	4.7	0.0	7.7	chr3	128194976	128195001	(70100558)	+	(CCT)n	Simple_repeat	1	26	(0)	2681354
240	18.0	4.3	4.3	chr3	128424686	128424778	(69870781)	C	L1MC5a	LINE/L1	(6)	2771	2679	2681705
227	30.8	13.9	4.9	chr3	128784188	128784494	(69511065)	+	L2	LINE/L2	2433	2771	(648)	2682461
18	12.2	4.2	4.0	chr3	129249550	129249597	(69045962)	+	(AGAGCGC)n	Simple_repeat	1	50	(0)	2683412
2182	9.6	1.0	2.3	chr3	130748036	130748172	(67547387)	C	AluSz	SINE/Alu	(174)	138	1	2685928
3929	16.4	6.1	3.1	chr3	130748173	130749041	(67546518)	C	L1MB8	LINE/L1	(121)	6057	5155	2685926
4463	15.6	0.8	0.1	chr3	131795308	131796024	(66499535)	+	MER72	LTR/ERV1	1	722	(0)	2687456
12	25.3	2.4	0.0	chr3	133330388	133330429	(64965130)	+	G-rich	Low_complexity	1	43	(0)	2689735
744	29.7	8.9	4.9	chr3	133425357	133425788	(64869771)	C	LTR78	LTR/ERV1	(3)	1301	851	2689871
13	35.3	2.6	5.0	chr3	133425795	133425910	(64869649)	+	A-rich	Low_complexity	1	119	(0)	2689872
97	16.2	5.4	0.4	chr3	133425911	133425943	(64869616)	+	GA-rich	Low_complexity	18	122	(113)	2689873
20	10.4	0.0	8.0	chr3	133573614	133573663	(64721896)	+	(CCCTC)n	Simple_repeat	1	50	(0)	2690190
24	24.1	4.4	2.1	chr3	133895487	133895577	(64399982)	+	GA-rich	Low_complexity	1	95	(0)	2690630
715	28.5	4.5	2.8	chr3	134799198	134799482	(63496077)	C	Charlie22a	DNA/hAT-Charlie	(136)	355	66	2691968
1868	22.5	11.3	12.8	chr3	136182326	136182669	(62112890)	+	L1MEc	LINE/L1	39	403	(5997)	2693914
494	7.1	0.0	0.0	chr3	136182670	136182739	(62112820)	+	Alu	SINE/Alu	236	305	(6)	2693915
1640	19.6	2.4	1.1	chr3	136191495	136191780	(62103779)	+	AluJo	SINE/Alu	1	290	(22)	2693939
271	27.1	9.2	0.8	chr3	138609349	138609478	(59686081)	C	L1ME4a	LINE/L1	(16)	6108	5967	2697790
95	3.0	0.0	2.8	chr3	138609534	138609641	(59685918)	+	(CT)n	Simple_repeat	1	108	(0)	2697791
624	11.5	4.4	0.0	chr3	138689121	138689207	(59606352)	C	AluSx3	SINE/Alu	(24)	287	197	2697932
447	29.9	3.9	3.9	chr3	138689226	138689378	(59606181)	+	MLT1J	LTR/ERVL-MaLR	125	277	(235)	2697933
1517	8.3	2.5	0.0	chr3	138689395	138689587	(59605972)	C	AluSz6	SINE/Alu	(113)	199	2	2697934
42	4.3	0.0	0.0	chr3	138916148	138916195	(59379364)	+	(CAGCCCA)n	Simple_repeat	1	48	(0)	2698511
245	28.2	17.6	1.7	chr3	139313027	139313145	(58982414)	+	L2c	LINE/L2	3017	3158	(229)	2699132
632	31.6	16.2	2.5	chr3	140291257	140292272	(58003287)	+	L2a	LINE/L2	1901	3082	(337)	2700613
332	25.3	16.1	2.7	chr3	141053576	141053762	(57241797)	+	L1ME4b	LINE/L1	1	217	(675)	2701699
245	26.7	18.9	1.3	chr3	141053781	141054019	(57241540)	+	L2	LINE/L2	2792	3082	(337)	2701700
14	0.0	0.0	0.0	chr3	141875533	141875565	(56419994)	+	(AAC)n	Simple_repeat	1	33	(0)	2703065
31	5.5	0.0	0.0	chr3	142027481	142027518	(56268041)	+	(CCTCTC)n	Simple_repeat	1	38	(0)	2703386
214	22.0	0.0	0.0	chr3	142982200	142982249	(55313310)	C	MIRb	SINE/MIR	(47)	221	172	2705014
14	26.9	4.6	1.5	chr3	142982267	142982331	(55313228)	+	GA-rich	Low_complexity	1	68	(0)	2705015
18	0.0	0.0	0.0	chr3	142982331	142982350	(55313209)	+	(AC)n	Simple_repeat	1	20	(0)	2705016
36	2.9	0.0	0.0	chr3	142982351	142982385	(55313174)	+	(AG)n	Simple_repeat	1	35	(0)	2705017
260	31.6	3.0	1.0	chr3	142982387	142982485	(55313074)	C	MIRb	SINE/MIR	(159)	109	9	2705014
14	5.9	4.7	8.9	chr3	143026920	143026981	(55268578)	+	(CCACTC)n	Simple_repeat	1	59	(0)	2705085
15	16.6	0.0	0.0	chr3	143971976	143972002	(54323557)	+	(GC)n	Simple_repeat	1	27	(0)	2706424
233	38.2	0.0	0.0	chr3	149618704	149618779	(48676780)	C	MIRb	SINE/MIR	(190)	78	3	2713915
12	25.6	0.0	2.5	chr3	149618847	149618886	(48676673)	+	(TCCTC)n	Simple_repeat	1	40	(0)	2713922
5397	21.4	7.4	2.5	chr3	149935119	149937580	(48357979)	C	L1M1	LINE/L1	(3733)	3829	1251	2714459
14	27.2	1.6	3.2	chr3	150408713	150408773	(47886786)	+	(CCGC)n	Simple_repeat	1	62	(0)	2715187
75	8.3	0.0	0.0	chr3	150703722	150703823	(47591736)	+	(CTC)n	Simple_repeat	1	102	(0)	2715698
287	20.0	3.4	3.4	chr3	150721309	150721396	(47574163)	C	MamRep564	Unknown	(157)	200	113	2715729
15	9.2	8.6	0.0	chr3	151086804	151086838	(47208721)	+	(AGCG)n	Simple_repeat	1	38	(0)	2716327
12	29.1	3.8	3.6	chr3	151460817	151460896	(46834663)	+	(CCCCAG)n	Simple_repeat	1	83	(0)	2716839
14	17.5	0.0	0.0	chr3	151460978	151461009	(46834550)	+	(GCCCGG)n	Simple_repeat	1	32	(0)	2716840
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
34	8.6	0.0	0.0	chr3	153163636	153163685	(45131874)	+	(T)n	Simple_repeat	1	50	(0)	2719349
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
18	7.6	0.0	0.0	chr3	157159984	157160011	(41135548)	+	(CGT)n	Simple_repeat	1	28	(0)	2725060
727	29.4	5.1	2.1	chr3	157917944	157918228	(40377331)	C	MER102b	DNA/hAT-Charlie	(11)	330	37	2726126
65	28.3	1.1	0.5	chr3	158106137	158106318	(40189241)	+	GA-rich	Low_complexity	1	184	(0)	2726363
209	17.7	2.4	0.0	chr3	159441304	159441352	(38854207)	C	L2b	LINE/L2	(2)	3385	3334	2728245
394	25.2	13.4	0.4	chr3	159441314	159441467	(38854092)	C	MIR	SINE/MIR	(6)	256	78	2728246
211	24.2	6.1	8.8	chr3	159441513	159441580	(38853979)	C	MIR	SINE/MIR	(187)	75	10	2728246
13	18.9	2.8	0.0	chr3	159763190	159763225	(38532334)	+	GA-rich	Low_complexity	1	37	(0)	2728698
12	13.8	4.4	6.4	chr3	159765903	159765947	(38529612)	+	G-rich	Low_complexity	1	47	(0)	2728703
22	16.8	1.8	3.5	chr3	160755496	160755552	(37540007)	+	G-rich	Low_complexity	1	58	(0)	2730311
37	0.0	0.0	0.0	chr3	160808290	160808321	(37487238)	+	(TG)n	Simple_repeat	1	32	(0)	2730391
47	0.0	0.0	0.0	chr3	160808384	160808423	(37487136)	+	(TG)n	Simple_repeat	1	40	(0)	2730391
12411	15.3	1.7	2.5	chr3	160885420	160887573	(37407986)	+	L1PA7	LINE/L1	3	2151	(4332)	2730519
12	13.9	0.0	0.0	chr3	168430729	168430752	(29864807)	+	(GAGG)n	Simple_repeat	1	24	(0)	2740052
35	11.8	1.8	0.0	chr3	169147711	169147766	(29147793)	+	(GT)n	Simple_repeat	1	57	(0)	2740986
15	20.6	3.9	1.9	chr3	169147844	169147895	(29147664)	+	G-rich	Low_complexity	1	54	(0)	2740987
696	27.5	8.7	0.8	chr3	169494968	169495209	(28800350)	C	Plat_L3	LINE/CR1	(212)	3374	3112	2741389
474	32.3	6.9	5.2	chr3	169564981	169565209	(28730350)	C	MIRb	SINE/MIR	(6)	262	30	2741493
226	26.1	3.2	8.0	chr3	169565164	169565263	(28730296)	+	L2c	LINE/L2	3289	3383	(4)	2741494
25	19.4	0.0	0.0	chr3	169583446	169583493	(28712066)	+	(CT)n	Simple_repeat	1	48	(0)	2741514
319	31.0	7.5	10.3	chr3	169628476	169628888	(28666671)	C	L2c	LINE/L2	(16)	3371	2969	2741579
17	7.9	0.0	0.0	chr3	169629065	169629091	(28666468)	+	(CCATC)n	Simple_repeat	1	27	(0)	2741580
74	9.6	2.4	0.0	chr3	169663443	169663565	(28631994)	+	(CT)n	Simple_repeat	1	126	(0)	2741635
309	28.1	2.8	1.9	chr3	169966448	169966552	(28329007)	+	MER5A	DNA/hAT-Charlie	78	183	(6)	2742119
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
1081	27.3	13.0	6.7	chr3	171427658	171428423	(26867136)	C	L2a	LINE/L2	(15)	3411	2493	2744506
28	8.3	0.0	0.0	chr3	171459216	171459253	(26836306)	+	(AC)n	Simple_repeat	1	38	(0)	2744556
30	19.1	3.0	0.0	chr3	171895397	171895462	(26400097)	+	(CT)n	Simple_repeat	1	68	(0)	2745252
378	27.7	10.6	2.8	chr3	171944483	171944692	(26350867)	C	MIRc	SINE/MIR	(17)	251	26	2745328
15	5.6	0.0	0.0	chr3	173584241	173584259	(24711300)	+	(A)n	Simple_repeat	1	19	(0)	2747754
35	0.0	0.0	0.0	chr3	173584400	173584432	(24711127)	+	(T)n	Simple_repeat	1	33	(0)	2747755
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
20	15.9	0.0	0.0	chr3	177105778	177105812	(21189747)	+	(GT)n	Simple_repeat	1	35	(0)	2752584
12	20.6	6.5	4.5	chr3	178085024	178085085	(20210474)	+	GA-rich	Low_complexity	1	66	(0)	2754203
1349	12.8	2.6	17.8	chr3	179347113	179347471	(18948088)	C	AluJo	SINE/Alu	(1)	311	9	2756042
21	12.2	2.0	4.0	chr3	180912587	180912635	(17382924)	+	(CCCCTCC)n	Simple_repeat	1	50	(0)	2758546
16	16.4	2.2	4.3	chr3	181711744	181711788	(16583771)	+	(CCT)n	Simple_repeat	1	46	(0)	2759749
13	16.1	2.5	4.9	chr3	182364969	182365008	(15930551)	+	G-rich	Low_complexity	1	41	(0)	2760930
281	31.8	7.6	3.8	chr3	183159270	183159461	(15136098)	C	L2b	LINE/L2	(284)	3091	2895	2762204
367	26.7	5.3	8.4	chr3	183193909	183194121	(15101438)	C	L2c	LINE/L2	(0)	3387	3182	2762270
1059	28.4	16.1	3.2	chr3	183698970	183699431	(14596128)	C	L2	LINE/L2	(527)	2892	2343	2763198
18	29.9	2.3	2.3	chr3	184354664	184354749	(13940810)	+	G-rich	Low_complexity	1	88	(0)	2764473
31	0.0	0.0	0.0	chr3	184380176	184380204	(13915355)	+	(GCCCCG)n	Simple_repeat	1	29	(0)	2764501
39	23.6	4.3	4.7	chr3	184380205	184380295	(13915264)	+	(CGCC)n	Simple_repeat	4	99	(0)	2764502
13	16.8	0.0	0.0	chr3	184380348	184380374	(13915185)	+	(GCT)n	Simple_repeat	1	27	(0)	2764503
23	20.8	0.0	1.8	chr3	184565823	184565879	(13729680)	+	(GCAGCT)n	Simple_repeat	1	57	(0)	2764915
20	28.1	0.0	1.5	chr3	184565880	184565888	(13729671)	+	(GCT)n	Simple_repeat	1	66	(0)	2764916
34	12.5	1.3	5.1	chr3	184568932	184569008	(13726551)	+	(CCTC)n	Simple_repeat	1	78	(0)	2764920
577	27.4	9.0	3.6	chr3	184685478	184685697	(13609862)	+	MIRb	SINE/MIR	7	239	(29)	2765132
12	15.3	5.3	2.5	chr3	184717024	184717061	(13578498)	+	G-rich	Low_complexity	1	40	(0)	2765187
13	7.8	3.5	3.3	chr3	184742952	184742980	(13552579)	+	(AGGG)n	Simple_repeat	1	30	(0)	2765234
23	17.0	0.0	0.0	chr3	184743081	184743120	(13552439)	+	(T)n	Simple_repeat	1	40	(0)	2765235
396	31.9	3.1	3.6	chr3	184777986	184778180	(13517379)	C	L2c	LINE/L2	(1)	3386	3193	2765303
12	15.4	5.3	2.5	chr3	184795480	184795517	(13500042)	+	G-rich	Low_complexity	1	40	(0)	2765340
17	22.6	0.0	8.2	chr3	184795612	184795684	(13499875)	+	(CCTC)n	Simple_repeat	1	73	(0)	2765341
84	15.0	7.2	0.0	chr3	185631424	185631618	(12663941)	+	(CTCC)n	Simple_repeat	1	209	(0)	2766789
1301	17.6	1.2	2.0	chr3	185760377	185760625	(12534934)	C	L1MB7	LINE/L1	(9)	6175	5929	2767034
373	28.1	5.8	4.1	chr3	185760789	185761007	(12534552)	+	L4_A_Mam	LINE/RTE-X	4740	4962	(28)	2767035
19	20.0	0.0	3.6	chr3	185823771	185823825	(12471734)	+	G-rich	Low_complexity	1	55	(0)	2767147
21	18.1	6.2	1.5	chr3	185825009	185825072	(12470487)	+	(CTC)n	Simple_repeat	1	68	(0)	2767148
21	23.0	3.4	4.4	chr3	185825048	185825135	(12470424)	+	(CCGC)n	Simple_repeat	1	91	(0)	2767149
17	15.6	0.0	0.0	chr3	185825220	185825248	(12470311)	+	(CT)n	Simple_repeat	1	29	(0)	2767150
11	18.4	2.4	4.8	chr3	185825251	185825291	(12470268)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	2767151
370	27.2	7.0	6.3	chr3	186654128	186654366	(11641193)	C	LTR33A_	LTR/ERVL	(274)	257	17	2768722
1515	31.5	1.6	4.2	chr3	187101518	187102170	(11193389)	C	L1MA7	LINE/L1	(4693)	1872	1216	2769578
12	31.2	1.6	3.2	chr3	187744737	187744797	(10550762)	+	GA-rich	Low_complexity	1	62	(0)	2770632
37	7.2	0.0	0.0	chr3	187750619	187750663	(10544896)	+	(AC)n	Simple_repeat	1	45	(0)	2770639
229	28.0	9.3	1.8	chr3	187750668	187750776	(10544783)	+	MIR3	SINE/MIR	48	165	(43)	2770640
12	13.5	0.0	7.9	chr3	188153852	188153889	(10141670)	+	G-rich	Low_complexity	1	38	(0)	2771373
27	22.9	2.6	0.0	chr3	188154039	188154114	(10141445)	+	(GGCGCGG)n	Simple_repeat	1	78	(0)	2771374
29	7.9	0.0	0.0	chr3	188154188	188154228	(10141331)	+	(GCC)n	Simple_repeat	1	41	(0)	2771375
13	5.2	0.0	0.0	chr3	188266176	188266195	(10029364)	+	(CAG)n	Simple_repeat	1	20	(0)	2771598
49	12.3	9.4	0.8	chr3	188266460	188266576	(10028983)	+	GA-rich	Low_complexity	1	128	(0)	2771599
424	27.2	18.6	2.4	chr3	189811602	189811808	(8483751)	C	MIRc	SINE/MIR	(3)	265	18	2774101
32	3.2	0.0	0.0	chr3	190323004	190323035	(7972524)	+	(AC)n	Simple_repeat	1	32	(0)	2774922
18	20.3	3.7	1.8	chr3	191199052	191199105	(7096454)	+	GA-rich	Low_complexity	1	56	(0)	2776192
452	30.3	12.7	3.2	chr3	191321216	191321720	(6973839)	+	LTR82A	LTR/ERVL	64	709	(163)	2776367
1707	24.2	14.0	2.6	chr3	191774403	191774986	(6520573)	+	MER76	LTR/ERVL	2	663	(28)	2776987
25	9.4	2.1	2.1	chr3	192409055	192409101	(5886458)	+	(GAGG)n	Simple_repeat	1	48	(0)	2777875
19	19.1	0.0	6.6	chr3	192410232	192410325	(5885234)	+	(CCCT)n	Simple_repeat	1	87	(0)	2777879
17	13.1	0.0	8.2	chr3	192727616	192727664	(5567895)	+	(CCCCCT)n	Simple_repeat	1	49	(0)	2778370
394	22.0	3.0	4.7	chr3	193241639	193241786	(5053773)	C	MIR3	SINE/MIR	(50)	158	19	2779171
16	31.0	1.4	1.4	chr3	194134104	194134176	(4161383)	+	G-rich	Low_complexity	1	74	(0)	2780601
13	17.8	4.9	2.3	chr3	194163904	194163944	(4131615)	+	(CCT)n	Simple_repeat	1	43	(0)	2780658
17	7.5	0.0	3.3	chr3	194312951	194312980	(3982579)	+	(CCTC)n	Simple_repeat	1	30	(0)	2780918
280	26.5	6.2	8.1	chr3	194486034	194486181	(3809378)	+	MIR3	SINE/MIR	6	150	(58)	2781193
14	18.3	2.7	0.0	chr3	194486839	194486875	(3808684)	+	G-rich	Low_complexity	1	38	(0)	2781196
606	33.1	12.0	4.0	chr3	194488307	194489162	(3806397)	+	L2	LINE/L2	1719	2658	(761)	2781198
12	15.7	2.6	5.0	chr3	195442412	195442450	(2853109)	+	GA-rich	Low_complexity	1	40	(0)	2782938
14	0.0	0.0	0.0	chr3	196432404	196432421	(1863138)	+	(CCG)n	Simple_repeat	1	18	(0)	2784995
1242	13.8	6.0	1.0	chr3	196444372	196444576	(1850983)	C	LTR8	LTR/ERV1	(399)	292	77	2785025
48	13.2	1.1	2.2	chr3	196444589	196444678	(1850881)	+	GA-rich	Low_complexity	1	91	(0)	2785026
419	18.8	4.0	1.0	chr3	196444679	196444775	(1850784)	C	LTR8	LTR/ERV1	(591)	100	1	2785025
559	13.2	1.1	2.2	chr3	196444777	196444867	(1850692)	+	AluJb	SINE/Alu	194	283	(29)	2785027
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
15	25.2	0.0	3.6	chr3	197298664	197298718	(996841)	+	G-rich	Low_complexity	1	55	(0)	2786666
32	23.6	4.3	1.0	chr4	577090	577183	(189637372)	+	(GT)n	Simple_repeat	1	98	(0)	2789273
12	20.2	0.0	6.7	chr4	577434	577478	(189637077)	+	(GGTG)n	Simple_repeat	1	45	(0)	2789274
13	18.4	5.3	0.0	chr4	825597	825634	(189388921)	+	GA-rich	Low_complexity	1	40	(0)	2789580
343	34.0	10.2	0.0	chr4	1345767	1345969	(188868586)	C	L2a	LINE/L2	(1545)	1874	1649	2790131
351	21.5	15.1	0.7	chr4	1346148	1346283	(188868272)	C	L1MB7	LINE/L1	(0)	6184	6026	2790133
13	0.0	0.0	0.0	chr4	1809091	1809107	(188405448)	+	(GGT)n	Simple_repeat	1	17	(0)	2790622
265	25.4	2.0	4.5	chr4	2060376	2060488	(188154067)	C	MIR3	SINE/MIR	(82)	186	73	2791042
906	21.3	5.2	4.8	chr4	2330031	2330281	(187884274)	+	L1MB8	LINE/L1	5914	6165	(13)	2791423
13	26.1	0.0	0.0	chr4	2536551	2536591	(187677964)	+	G-rich	Low_complexity	1	41	(0)	2791757
12	21.1	0.0	2.9	chr4	2536598	2536632	(187677923)	+	(CCCCT)n	Simple_repeat	1	35	(0)	2791758
13	19.2	3.8	5.5	chr4	2788571	2788623	(187425932)	+	(CCTG)n	Simple_repeat	1	55	(0)	2792245
12	6.9	5.9	5.6	chr4	3292251	3292284	(186922271)	+	G-rich	Low_complexity	1	36	(0)	2793024
936	21.6	27.5	0.0	chr4	3655688	3655979	(186558576)	C	MER57B2	LTR/ERV1	(0)	403	1	2793436
379	27.4	14.6	3.8	chr4	3880982	3881157	(186333398)	+	MIRb	SINE/MIR	18	201	(29)	2793755
15	17.9	0.0	2.9	chr4	4666790	4666824	(185547731)	+	(CCT)n	Simple_repeat	1	35	(0)	2795195
13	11.6	0.0	6.2	chr4	4775811	4775842	(185438713)	+	G-rich	Low_complexity	1	32	(0)	2795433
25	24.2	2.9	4.7	chr4	4859276	4859378	(185355177)	+	GA-rich	Low_complexity	1	106	(0)	2795607
1768	18.3	3.3	15.5	chr4	6568470	6568915	(183645640)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2798628
1905	15.2	1.6	1.0	chr4	6628523	6628832	(183585723)	+	AluJb	SINE/Alu	1	312	(0)	2798770
41	13.9	2.4	1.2	chr4	6628836	6628917	(183585638)	+	G-rich	Low_complexity	1	84	(0)	2798771
230	30.2	5.3	7.0	chr4	6628920	6629147	(183585408)	+	L1ME3B	LINE/L1	5993	6216	(26)	2798765
17	20.4	8.5	2.2	chr4	6782459	6782540	(183432015)	+	(CCCGCAG)n	Simple_repeat	1	89	(0)	2799089
12	19.6	0.0	0.0	chr4	6783542	6783570	(183430985)	+	(CTCCC)n	Simple_repeat	1	29	(0)	2799090
24	23.1	4.0	6.2	chr4	6783607	6783731	(183430824)	+	G-rich	Low_complexity	1	130	(0)	2799091
243	25.9	0.0	0.0	chr4	6927195	6927248	(183287307)	C	L2c	LINE/L2	(70)	3317	3264	2799327
258	27.4	8.6	3.6	chr4	6927306	6927415	(183287140)	+	MIR	SINE/MIR	7	122	(140)	2799328
16	24.4	3.5	5.6	chr4	7042373	7042458	(183172097)	+	(CCTCTC)n	Simple_repeat	1	89	(0)	2799507
315	32.3	10.1	0.5	chr4	7153617	7153840	(183060715)	C	L1ME3A	LINE/L1	(251)	5943	5696	2799702
34	7.2	1.6	4.6	chr4	7196599	7196662	(183017893)	+	(CCTCC)n	Simple_repeat	1	65	(0)	2799786
215	31.6	15.2	0.2	chr4	8278733	8278864	(181935691)	+	MIR3	SINE/MIR	33	191	(39)	2801527
260	20.6	6.4	1.4	chr4	8594448	8594521	(181620034)	+	MIRb	SINE/MIR	52	129	(139)	2801997
1108	20.5	5.7	3.9	chr4	8594664	8594772	(181619783)	C	MER33	DNA/hAT-Charlie	(0)	324	221	2801998
3234	15.3	2.9	0.2	chr4	13640147	13640651	(176573904)	C	LTR72	LTR/ERV1	(0)	519	1	2809621
22	19.5	0.0	0.0	chr4	15003113	15003159	(175211396)	+	(CCT)n	Simple_repeat	1	47	(0)	2811955
14	8.1	3.9	0.0	chr4	15003176	15003201	(175211354)	+	(AGC)n	Simple_repeat	1	27	(0)	2811956
13	17.5	0.0	2.9	chr4	18020715	18020748	(172193807)	+	G-rich	Low_complexity	1	34	(0)	2817240
17	19.5	0.0	0.0	chr4	18020741	18020771	(172193784)	+	(TG)n	Simple_repeat	1	31	(0)	2817241
13	23.9	0.0	2.4	chr4	18021876	18021916	(172192639)	+	(CTCCC)n	Simple_repeat	1	41	(0)	2817244
30	26.4	1.5	5.8	chr4	22516000	22516135	(167698420)	+	(CGC)n	Simple_repeat	1	138	(0)	2824079
25	14.4	2.3	0.0	chr4	23890218	23890264	(166324291)	+	A-rich	Low_complexity	1	48	(0)	2826200
34	23.9	3.2	0.0	chr4	26239673	26239765	(163974790)	+	GA-rich	Low_complexity	1	96	(0)	2830664
44	21.5	6.1	0.0	chr4	30720221	30720242	(159494313)	+	GA-rich	Low_complexity	1	135	(0)	2837091
30	20.2	5.7	2.7	chr4	30720243	30720347	(159494208)	+	G-rich	Low_complexity	1	111	(0)	2837092
14	17.6	0.0	0.0	chr4	30721391	30721422	(159493133)	+	(AGCAGC)n	Simple_repeat	1	32	(0)	2837093
12	17.5	0.0	5.6	chr4	37453303	37453338	(152761217)	+	G-rich	Low_complexity	1	36	(0)	2846126
35	7.0	0.0	0.0	chr4	37891044	37891089	(152323466)	+	(CCT)n	Simple_repeat	1	46	(0)	2846890
12	34.6	0.0	3.0	chr4	37891094	37891108	(152323447)	+	(GCT)n	Simple_repeat	1	35	(31)	2846891
14	19.4	0.0	5.0	chr4	37891109	37891148	(152323407)	+	(GCC)n	Simple_repeat	1	40	(0)	2846892
30	16.3	0.0	3.0	chr4	37977230	37977295	(152237260)	+	(CCCTC)n	Simple_repeat	1	66	(0)	2847045
21	26.8	1.3	2.6	chr4	37977356	37977430	(152237125)	+	(CCG)n	Simple_repeat	1	76	(0)	2847046
248	33.9	13.2	0.0	chr4	38016787	38017004	(152197551)	C	L2b	LINE/L2	(501)	2918	2668	2847094
1154	30.6	8.4	5.2	chr4	38162082	38162814	(152051741)	C	LTR78	LTR/ERV1	(62)	1242	484	2847303
314	9.1	15.4	5.7	chr4	38191249	38191318	(152023237)	+	MADE1	DNA/TcMar-Mariner	1	78	(2)	2847357
12	25.3	3.8	1.8	chr4	38664311	38664363	(151550192)	+	(CGCC)n	Simple_repeat	1	55	(0)	2848198
13	19.6	0.0	0.0	chr4	39365944	39365973	(150848582)	+	(CCTT)n	Simple_repeat	1	30	(0)	2849468
14	13.6	0.0	5.6	chr4	39698529	39698564	(150515991)	+	(TCCCC)n	Simple_repeat	1	36	(0)	2850245
29	6.0	1.7	6.6	chr4	40265645	40265704	(149948851)	+	(GGGAGA)n	Simple_repeat	1	61	(0)	2851621
1900	16.4	1.0	3.9	chr4	41133971	41134281	(149080274)	C	AluJr	SINE/Alu	(10)	302	1	2853504
57	1.9	0.0	0.0	chr4	41863734	41863786	(148350769)	+	(TG)n	Simple_repeat	1	53	(0)	2854744
25	0.0	0.0	2.9	chr4	52376242	52376276	(137838279)	+	(GAAAAA)n	Simple_repeat	1	35	(0)	2866101
21	0.0	0.0	0.0	chr4	53012815	53012837	(137201718)	+	(TG)n	Simple_repeat	1	23	(0)	2867122
2354	3.6	0.3	0.0	chr4	54032256	54032560	(136181995)	+	SVA_D	Retroposon/SVA	18	323	(1063)	2868615
12	27.7	0.0	0.0	chr4	54064238	54064276	(136150279)	+	(CTC)n	Simple_repeat	1	39	(0)	2868660
12	30.2	5.8	0.0	chr4	55396377	55396445	(134818110)	+	G-rich	Low_complexity	1	73	(0)	2870819
308	33.3	0.9	0.0	chr4	56822067	56822171	(133392384)	C	L2b	LINE/L2	(6)	3369	3264	2873372
529	26.5	3.2	3.8	chr4	57102129	57102285	(133112270)	+	UCON55	DNA/TcMar-Tigger	14	169	(23)	2873968
231	36.1	4.6	5.0	chr4	57102483	57102701	(133111854)	C	L3b	LINE/CR1	(177)	5055	4838	2873969
49	25.2	3.5	0.0	chr4	61199939	61200082	(129014473)	+	GA-rich	Low_complexity	1	149	(0)	2879115
17	11.6	0.0	0.0	chr4	70705259	70705287	(119509268)	+	(GCG)n	Simple_repeat	1	29	(0)	2891024
12	17.7	3.1	0.0	chr4	70902282	70902313	(119312242)	+	(CCTCC)n	Simple_repeat	1	33	(0)	2891446
195	34.7	7.0	9.1	chr4	72296039	72296301	(117918254)	C	L2a	LINE/L2	(97)	3290	3034	2893323
14	23.2	3.9	1.9	chr4	72569185	72569236	(117645319)	+	(AGCG)n	Simple_repeat	1	54	(0)	2893668
22	17.0	0.0	6.6	chr4	72569253	72569313	(117645242)	+	GA-rich	Low_complexity	1	61	(0)	2893669
27	7.0	4.4	0.0	chr4	73258871	73258915	(116955640)	+	(GGGA)n	Simple_repeat	1	47	(0)	2894659
4517	22.1	2.4	0.6	chr4	73964879	73965923	(116248632)	C	L1PA12	LINE/L1	(5676)	1109	6	2895556
622	28.4	14.6	3.1	chr4	76704212	76704823	(113509732)	C	L2a	LINE/L2	(4)	3422	2728	2899712
25	22.1	6.3	4.4	chr4	76949773	76949899	(113264656)	+	(AGCCGG)n	Simple_repeat	1	135	(0)	2900137
18	12.6	0.0	0.0	chr4	77075885	77075911	(113138644)	+	(A)n	Simple_repeat	1	27	(0)	2900313
21	17.5	3.6	1.8	chr4	77075912	77075937	(113138618)	+	A-rich	Low_complexity	3	57	(0)	2900314
13	16.6	6.8	4.8	chr4	77815420	77815478	(112399077)	+	(TCCCTC)n	Simple_repeat	1	63	(0)	2901216
28	14.7	6.6	3.7	chr4	80184410	80184485	(110030070)	+	(CT)n	Simple_repeat	1	81	(0)	2904505
27	2.8	2.6	2.5	chr4	81030439	81030477	(109184078)	+	(AAAAC)n	Simple_repeat	1	40	(0)	2905572
12	17.3	8.9	3.3	chr4	81030514	81030569	(109183986)	+	(TCCTCT)n	Simple_repeat	1	61	(0)	2905573
28	25.0	0.0	0.0	chr4	81030718	81030778	(109183777)	+	(CA)n	Simple_repeat	1	61	(0)	2905574
18880	14.4	3.6	3.6	chr4	82201049	82208046	(108006509)	+	L1MA3	LINE/L1	8	7724	(0)	2907237
2084	14.5	0.3	0.3	chr4	82210723	82211025	(108003530)	+	AluJb	SINE/Alu	2	304	(8)	2907242
15	9.1	0.0	0.0	chr4	83010797	83010820	(107203735)	+	(GCC)n	Simple_repeat	1	24	(0)	2908655
13	4.3	3.9	3.7	chr4	83010826	83010851	(107203704)	+	(CCT)n	Simple_repeat	1	27	(0)	2908656
1782	23.1	9.9	5.5	chr4	84870234	84870887	(105343668)	+	L1MCa	LINE/L1	5	690	(5355)	2911743
19	13.0	2.2	4.3	chr4	84966775	84966782	(105247773)	+	(CCTT)n	Simple_repeat	1	46	(0)	2911912
13	12.6	5.4	2.6	chr4	84966783	84966819	(105247736)	+	(CCTTT)n	Simple_repeat	1	39	(0)	2911913
17	8.9	0.0	0.0	chr4	85475770	85475793	(104738762)	+	(TG)n	Simple_repeat	1	24	(0)	2912566
24	21.5	0.0	3.1	chr4	85823800	85823840	(104390715)	+	(TTCC)n	Simple_repeat	1	41	(0)	2913033
26	3.1	3.0	0.0	chr4	85823841	85823873	(104390682)	+	(CCCTC)n	Simple_repeat	1	34	(0)	2913034
24	21.5	0.0	3.1	chr4	85823874	85823895	(104390660)	+	(TTCC)n	Simple_repeat	2	22	(0)	2913035
16	11.1	0.0	3.1	chr4	85823896	85823905	(104390650)	+	(TTTTTC)n	Simple_repeat	1	32	(0)	2913036
14	14.2	3.2	0.0	chr4	85930156	85930186	(104284369)	+	GA-rich	Low_complexity	1	32	(0)	2913181
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
680	34.6	12.6	3.4	chr4	87058586	87059651	(103154904)	+	L2	LINE/L2	1708	2885	(534)	2914851
20	0.0	0.0	0.0	chr4	87069272	87069293	(103145262)	+	(T)n	Simple_repeat	1	22	(0)	2914866
40	25.8	4.5	8.0	chr4	87069357	87069666	(103144889)	+	(TTCC)n	Simple_repeat	1	324	(0)	2914867
17	20.6	0.0	0.0	chr4	88823320	88823358	(101391197)	+	(CTC)n	Simple_repeat	1	39	(0)	2917721
32	8.3	2.0	0.0	chr4	88823366	88823416	(101391139)	+	(CCT)n	Simple_repeat	1	52	(0)	2917722
13	18.9	2.0	6.0	chr4	89837455	89837503	(100377052)	+	(CCTCTT)n	Simple_repeat	1	50	(0)	2919195
19	4.0	3.9	0.0	chr4	90127564	90127589	(100086966)	+	(CT)n	Simple_repeat	1	27	(0)	2919578
589	30.9	8.6	0.9	chr4	94448102	94448317	(95766238)	+	MamSINE1	SINE/tRNA-RTE	38	271	(19)	2925014
18	0.0	0.0	0.0	chr4	98929300	98929319	(91285236)	+	(T)n	Simple_repeat	1	20	(0)	2930946
21	15.3	3.1	6.0	chr4	101346965	101347029	(88867526)	+	(CCG)n	Simple_repeat	1	67	(0)	2934249
18	8.5	0.0	0.0	chr4	102502333	102502357	(87712198)	+	(CT)n	Simple_repeat	1	25	(0)	2935762
43	0.0	0.0	0.0	chr4	102502391	102502427	(87712128)	+	(CA)n	Simple_repeat	1	37	(0)	2935763
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
345	23.6	5.3	0.0	chr4	108117803	108117891	(82096664)	C	MIR3	SINE/MIR	(17)	191	98	2942964
414	29.4	5.3	5.9	chr4	108148530	108148699	(82065856)	+	L2b	LINE/L2	3205	3373	(2)	2943011
12	22.0	4.8	0.0	chr4	108167889	108167930	(82046625)	+	(GCGG)n	Simple_repeat	1	44	(0)	2943036
19	25.9	1.8	0.0	chr4	108168479	108168534	(82046021)	+	GA-rich	Low_complexity	1	57	(0)	2943037
15	22.1	0.0	2.3	chr4	110623140	110623183	(79591372)	+	(CTCCGC)n	Simple_repeat	1	44	(0)	2946875
27	19.9	3.5	3.4	chr4	110636976	110637061	(79577494)	+	(TCTC)n	Simple_repeat	1	89	(0)	2946880
39	6.7	0.0	0.0	chr4	110851273	110851319	(79363236)	+	(TG)n	Simple_repeat	1	47	(0)	2947161
833	25.0	2.1	5.7	chr4	111993049	111993345	(78221210)	+	UCON84	Unknown	148	433	(294)	2948519
13	16.4	2.8	2.7	chr4	112297649	112297684	(77916871)	+	(GGTGG)n	Simple_repeat	1	37	(0)	2948997
14	15.5	5.6	0.0	chr4	113049614	113049649	(77164906)	+	(CCT)n	Simple_repeat	1	38	(0)	2950327
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
17	12.1	5.6	0.0	chr4	115113815	115113850	(75100705)	+	(GCT)n	Simple_repeat	1	38	(0)	2952865
207	21.0	15.0	2.7	chr4	118775970	118776062	(71438493)	+	L2a	LINE/L2	3293	3424	(2)	2957490
26	23.9	2.0	6.5	chr4	118776064	118776163	(71438392)	+	G-rich	Low_complexity	1	95	(0)	2957491
43	22.1	0.8	3.4	chr4	119185059	119185175	(71029380)	+	(CCTTT)n	Simple_repeat	1	118	(0)	2958090
740	20.4	0.8	0.8	chr4	119185177	119185308	(71029247)	C	FLAM_C	SINE/Alu	(10)	133	2	2958091
12	0.0	5.3	0.0	chr4	121070496	121070514	(69144041)	+	(GGA)n	Simple_repeat	1	20	(0)	2960587
55	25.2	2.3	5.5	chr4	121674163	121674377	(68540178)	+	GA-rich	Low_complexity	1	220	(0)	2961387
16	8.8	5.0	4.8	chr4	121952061	121952100	(68262455)	+	G-rich	Low_complexity	1	42	(0)	2961852
13	19.6	0.0	0.0	chr4	122152490	122152519	(68062036)	+	(GCC)n	Simple_repeat	1	30	(0)	2962145
655	33.0	10.1	2.5	chr4	122843015	122843588	(67370967)	C	L2c	LINE/L2	(45)	3342	2702	2963113
34	5.6	0.0	0.0	chr4	125315055	125315092	(64899463)	+	(TG)n	Simple_repeat	1	38	(0)	2966465
2076	16.0	3.3	4.7	chr4	127975133	127975598	(62238957)	C	L1MB3	LINE/L1	(0)	6183	5725	2969861
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
13	21.9	3.5	5.0	chr4	128393637	128393694	(61820861)	+	GA-rich	Low_complexity	1	60	(0)	2970684
61	0.0	1.7	1.6	chr4	128553015	128553074	(61661481)	+	(CT)n	Simple_repeat	1	61	(0)	2970885
16	5.3	0.0	0.0	chr4	128553281	128553300	(61661255)	+	(AC)n	Simple_repeat	1	20	(0)	2970886
796	32.2	4.9	2.2	chr4	128601304	128601662	(61612893)	C	MamRTE1	LINE/RTE-BovB	(331)	3481	3113	2970966
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	18.8	0.0	8.0	chr4	128812373	128812422	(61402133)	+	(CGGCGCG)n	Simple_repeat	1	50	(0)	2971410
26	25.3	0.0	8.2	chr4	137532599	137532639	(52681916)	+	GA-rich	Low_complexity	1	120	(0)	2981785
15	17.7	3.5	6.7	chr4	139177227	139177304	(51037251)	+	(CCT)n	Simple_repeat	1	75	(0)	2984095
18	7.5	0.0	0.0	chr4	139556235	139556262	(50658293)	+	(GGA)n	Simple_repeat	1	28	(0)	2984844
13	16.4	0.0	5.3	chr4	139556334	139556371	(50658184)	+	(CCCTCGC)n	Simple_repeat	1	38	(0)	2984845
13	21.4	3.9	3.7	chr4	139560577	139560628	(50653927)	+	GA-rich	Low_complexity	1	54	(0)	2984848
38	26.6	3.2	3.7	chr4	139657523	139657669	(50556886)	+	GA-rich	Low_complexity	1	145	(0)	2985054
74	0.0	0.0	0.0	chr4	139657670	139657735	(50556820)	+	(AAGA)n	Simple_repeat	1	66	(0)	2985055
699	13.8	16.8	3.6	chr4	139801220	139801384	(50413171)	C	MER53	DNA/hAT	(1)	192	2	2985268
2355	11.0	0.0	0.0	chr4	140006304	140006611	(50207944)	+	AluSx1	SINE/Alu	1	308	(4)	2985575
12	21.0	2.4	2.4	chr4	140049208	140049248	(50165307)	+	(TCCCTCT)n	Simple_repeat	1	42	(0)	2985643
32	19.4	2.5	1.2	chr4	140151163	140151241	(50063314)	+	GA-rich	Low_complexity	1	81	(0)	2985797
17	28.2	2.0	0.0	chr4	140152170	140152232	(50062323)	+	(GC)n	Simple_repeat	1	64	(0)	2985800
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
317	35.3	7.5	1.7	chr4	141041081	141041256	(49173299)	C	L2c	LINE/L2	(3)	3384	3198	2987172
5063	21.0	4.3	4.3	chr4	141374002	141376266	(48838289)	C	L1PA16	LINE/L1	(3309)	3606	1271	2987601
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
21	16.2	2.0	2.0	chr4	143336127	143336176	(46878379)	+	(CTCC)n	Simple_repeat	1	51	(0)	2990175
12	32.3	0.0	1.8	chr4	143336252	143336307	(46878248)	+	G-rich	Low_complexity	1	56	(0)	2990176
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
18	21.7	2.6	6.2	chr4	145733135	145733212	(44481343)	+	(GCCC)n	Simple_repeat	1	80	(0)	2993328
17	19.7	2.8	0.0	chr4	145938133	145938168	(44276387)	+	GA-rich	Low_complexity	1	37	(0)	2993606
305	35.9	1.3	7.5	chr4	147760203	147760443	(42454112)	C	MIRc	SINE/MIR	(10)	258	33	2996190
214	34.6	0.0	1.3	chr4	147768098	147768176	(42446379)	C	L2c	LINE/L2	(35)	3352	3275	2996212
618	21.1	0.7	4.7	chr4	148205325	148205473	(42009082)	C	L1ME4b	LINE/L1	(21)	871	729	2996819
578	34.5	10.0	2.3	chr4	148205562	148205947	(42008608)	C	L2c	LINE/L2	(1)	3386	2968	2996820
19	30.5	0.0	5.2	chr4	148442401	148442497	(41772058)	+	G-rich	Low_complexity	1	97	(0)	2997124
21	24.3	8.3	1.1	chr4	150046915	150046998	(40167557)	+	(CT)n	Simple_repeat	1	91	(0)	2999201
13	19.2	2.8	0.0	chr4	151325612	151325647	(38888908)	+	(TCCCAC)n	Simple_repeat	1	37	(0)	3001284
13	17.4	4.9	2.3	chr4	151761141	151761181	(38453374)	+	GA-rich	Low_complexity	1	43	(0)	3001943
14	22.8	0.0	0.0	chr4	152536311	152536346	(37678209)	+	(CGC)n	Simple_repeat	1	36	(0)	3003141
37	14.7	1.6	0.0	chr4	153152389	153152451	(37062104)	+	(TA)n	Simple_repeat	1	64	(0)	3004119
13	21.9	0.0	2.6	chr4	153344509	153344553	(36870002)	+	(CCCCAG)n	Simple_repeat	1	43	(0)	3004473
11	27.0	3.6	1.8	chr4	153344683	153344737	(36869818)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3004474
12	12.2	3.7	0.0	chr4	155667579	155667605	(34546950)	+	GA-rich	Low_complexity	1	28	(0)	3007758
15	22.3	0.0	2.3	chr4	156971179	156971222	(33243333)	+	G-rich	Low_complexity	1	44	(0)	3009493
13	15.5	5.6	0.0	chr4	158782715	158782750	(31431805)	+	G-rich	Low_complexity	1	38	(0)	3011906
1857	17.3	2.6	2.0	chr4	159050522	159050822	(31163733)	+	AluJo	SINE/Alu	2	304	(8)	3012296
1388	20.0	2.4	12.3	chr4	159137151	159137566	(31076989)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3012477
24	16.6	0.0	0.0	chr4	165295006	165295052	(24919503)	+	(CCTC)n	Simple_repeat	1	47	(0)	3020869
1559	19.7	0.3	14.5	chr4	168475693	168476126	(21738429)	+	MLT1A	LTR/ERVL-MaLR	1	372	(2)	3024862
16	12.9	0.0	5.3	chr4	168831591	168831628	(21382927)	+	(CAGTCC)n	Simple_repeat	1	38	(0)	3025410
43	19.5	2.8	1.8	chr4	169256222	169256328	(20958227)	+	GA-rich	Low_complexity	1	110	(0)	3026050
263	25.5	13.2	6.2	chr4	169256335	169256454	(20958101)	C	MIRc	SINE/MIR	(93)	175	42	3026051
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
6491	5.4	0.5	10.8	chr4	173183492	173184653	(17029902)	C	SVA_B	Retroposon/SVA	(340)	1043	2	3031262
199	37.8	3.1	4.5	chr4	173191863	173191995	(17022560)	C	L2c	LINE/L2	(20)	3367	3237	3031271
200	31.2	10.4	2.6	chr4	173192177	173192291	(17022264)	C	X7A_LINE	LINE/CR1	(132)	135	11	3031272
2228	11.1	0.0	0.3	chr4	173372786	173373083	(16841472)	C	AluSx1	SINE/Alu	(15)	297	1	3031516
12	16.1	0.0	3.3	chr4	173373132	173373161	(16841394)	+	(CTCC)n	Simple_repeat	1	30	(0)	3031517
13	12.1	0.0	3.5	chr4	173529847	173529875	(16684680)	+	(CCCTC)n	Simple_repeat	1	29	(0)	3031759
28	30.1	0.0	1.1	chr4	173642645	173642739	(16571816)	+	GA-rich	Low_complexity	1	95	(0)	3031883
23	19.2	0.0	6.0	chr4	180058811	180058877	(10155678)	+	GA-rich	Low_complexity	1	67	(0)	3040277
12	4.8	4.5	0.0	chr4	182143925	182143946	(8070609)	+	(GGGA)n	Simple_repeat	1	23	(0)	3043027
13	13.7	2.9	2.9	chr4	182144167	182144200	(8070355)	+	(CTCCT)n	Simple_repeat	1	35	(0)	3043028
29	0.0	0.0	0.0	chr4	182144203	182144227	(8070328)	+	(CA)n	Simple_repeat	1	25	(0)	3043029
23	23.3	1.7	0.0	chr4	183099190	183099258	(7115297)	+	GA-rich	Low_complexity	1	70	(0)	3044388
21	9.7	4.3	2.1	chr4	183099352	183099397	(7115158)	+	(CCGCGCC)n	Simple_repeat	1	48	(0)	3044389
2649	27.0	8.9	4.1	chr4	183171610	183173003	(7041552)	C	HAL1	LINE/L1	(1)	2506	1039	3044519
26	14.4	0.0	0.0	chr4	183173022	183173068	(7041487)	+	(CCTCC)n	Simple_repeat	1	47	(0)	3044520
1839	15.9	1.1	2.5	chr4	183173069	183173351	(7041204)	C	AluJo	SINE/Alu	(33)	279	1	3044521
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
23	23.7	7.2	1.0	chr4	184455199	184455240	(5759315)	+	(TTCC)n	Simple_repeat	1	80	(39)	3046593
28	4.5	1.9	5.7	chr4	184455241	184455292	(5759263)	+	(CCTCC)n	Simple_repeat	1	53	(0)	3046594
23	23.7	7.2	1.0	chr4	184455293	184455310	(5759245)	+	(TTCC)n	Simple_repeat	81	119	(0)	3046593
26	15.6	0.0	0.0	chr4	184473891	184473934	(5740621)	+	(CA)n	Simple_repeat	1	44	(0)	3046624
35	0.0	0.0	6.5	chr4	184474081	184474126	(5740429)	+	(CCT)n	Simple_repeat	1	46	(0)	3046625
20	16.7	0.0	0.0	chr4	184474127	184474166	(5740389)	+	(GCA)n	Simple_repeat	1	40	(0)	3046626
31	17.6	2.5	2.4	chr4	184474579	184474658	(5739897)	+	(CCCTCCG)n	Simple_repeat	1	82	(0)	3046627
2137	22.6	10.0	1.0	chr4	185115830	185116338	(5098217)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3047705
424	17.9	13.2	0.0	chr4	185165697	185165808	(5048747)	C	L1MB4	LINE/L1	(2)	6178	6050	3047802
2312	12.5	0.0	0.0	chr5	341004	341314	(181196945)	C	AluSx	SINE/Alu	(1)	311	1	3055343
4280	23.3	6.7	12.3	chr5	341315	341518	(181196741)	C	L1MD	LINE/L1	(2794)	3352	3139	3055333
1207	14.5	3.6	0.5	chr5	341519	341704	(181196555)	C	AluSx3	SINE/Alu	(2)	309	118	3055344
31	5.7	1.6	6.3	chr5	389897	389958	(181148301)	+	(AGGGGG)n	Simple_repeat	1	63	(0)	3055383
24	16.2	4.0	5.1	chr5	389960	390035	(181148224)	+	(GACAG)n	Simple_repeat	1	79	(0)	3055384
456	36.6	6.0	6.7	chr5	390040	390106	(181148153)	+	HAL1	LINE/L1	877	945	(1562)	3055385
1271	20.1	3.2	0.0	chr5	390107	390345	(181147914)	+	L1MA2	LINE/L1	6058	6304	(0)	3055386
272	17.5	1.7	0.0	chr5	1316513	1316569	(180221690)	+	MER88	LTR/ERVL	4	61	(403)	3056136
17	36.3	0.0	0.0	chr5	1667559	1667624	(179870635)	+	GA-rich	Low_complexity	1	66	(0)	3056514
31	15.5	4.7	3.4	chr5	1830691	1830775	(179707484)	+	(CCT)n	Simple_repeat	1	89	(0)	3056698
25	20.6	2.9	1.4	chr5	6467135	6467203	(175071056)	+	(TCTC)n	Simple_repeat	1	71	(0)	3061901
1772	17.4	4.4	1.9	chr5	6467261	6467634	(175070625)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	4	3061902
1805	22.1	9.2	3.3	chr5	10270203	10270558	(171267701)	+	MLT1E2	LTR/ERVL-MaLR	244	620	(7)	3066587
406	33.3	5.1	4.2	chr5	10270708	10270779	(171267480)	+	MLT1I	LTR/ERVL-MaLR	44	117	(294)	3066589
17	20.7	3.5	10.0	chr5	10306359	10306474	(171231785)	+	GA-rich	Low_complexity	1	120	(0)	3066657
40	25.7	2.9	7.5	chr5	10307850	10308095	(171230164)	+	G-rich	Low_complexity	1	253	(0)	3066658
12	30.4	0.0	0.0	chr5	10422997	10423040	(171115219)	+	(TTT)n	Simple_repeat	1	44	(0)	3066867
354	26.2	1.3	3.1	chr5	10485104	10485246	(171053013)	C	MLT1O	LTR/ERVL-MaLR	(341)	254	111	3066968
318	30.3	15.7	3.9	chr5	10601354	10601665	(170936594)	+	L2c	LINE/L2	3032	3387	(0)	3067213
36	0.0	0.0	0.0	chr5	10761386	10761418	(170776841)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	3067423
13	18.9	3.5	6.8	chr5	10761419	10761475	(170776784)	+	GA-rich	Low_complexity	1	59	(0)	3067424
245	16.7	4.5	0.0	chr5	14036582	14036623	(167501636)	C	MER91A	DNA/hAT-Tip100	(11)	185	142	3071659
12	26.1	2.2	2.2	chr5	14143247	14143291	(167394968)	+	(CTTTC)n	Simple_repeat	1	46	(0)	3071857
34	19.8	2.1	12.7	chr5	14157353	14157591	(167380668)	+	(CTCTT)n	Simple_repeat	1	244	(0)	3071873
190	29.0	9.9	3.3	chr5	14545625	14545774	(166992485)	+	L3	LINE/CR1	2414	2574	(1525)	3072311
54	21.6	2.8	2.0	chr5	16617666	16617807	(164920452)	+	(CT)n	Simple_repeat	1	146	(0)	3075253
356	24.4	5.8	6.4	chr5	16618266	16618405	(164919854)	+	L1ME3	LINE/L1	6016	6154	(8)	3075254
1887	15.3	0.6	4.4	chr5	16891001	16891320	(164646939)	+	AluSx1	SINE/Alu	1	308	(4)	3075717
74	0.0	1.2	3.6	chr5	16891321	16891403	(164646856)	+	(AAGG)n	Simple_repeat	1	84	(0)	3075718
3648	15.2	2.5	7.1	chr5	16891404	16891643	(164646616)	+	L1MB7	LINE/L1	5966	6163	(21)	3075715
20	3.9	0.0	0.0	chr5	16931279	16931305	(164606954)	+	(TAA)n	Simple_repeat	1	27	(0)	3075806
30	18.2	0.0	0.0	chr5	17217607	17217664	(164320595)	+	(GGC)n	Simple_repeat	1	58	(0)	3076467
21	19.8	2.0	0.0	chr5	17375210	17375258	(164163001)	+	(CTCTCC)n	Simple_repeat	1	50	(0)	3076733
351	28.8	2.8	8.0	chr5	17375280	17375517	(164162742)	C	MamGypLTR2b	LTR/Gypsy	(17)	905	556	3076734
697	19.6	6.4	4.1	chr5	31638707	31638903	(149899356)	+	MamRep488	DNA/hAT-Tip100	15	216	(3)	3095274
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
836	21.8	5.6	0.4	chr5	32176485	32176689	(149361570)	+	MLT1F1	LTR/ERVL-MaLR	7	270	(309)	3096329
503	30.8	5.6	1.2	chr5	32531851	32532021	(149006238)	C	MIR3	SINE/MIR	(8)	200	22	3097054
1177	20.4	11.4	2.5	chr5	34441024	34441349	(147096910)	+	MER57E1	LTR/ERV1	12	370	(2)	3099797
422	27.1	5.8	2.7	chr5	34441350	34441630	(147096629)	C	MamRep4096	DNA/hAT-Tip100	(79)	347	57	3099798
845	24.7	10.0	5.4	chr5	34511985	34512297	(147025962)	+	LTR33	LTR/ERVL	28	356	(159)	3099900
24	7.9	2.3	2.3	chr5	34616087	34616129	(146922130)	+	(GAGG)n	Simple_repeat	1	44	(0)	3100100
15	18.2	0.0	4.8	chr5	34655147	34655189	(146883070)	+	G-rich	Low_complexity	1	40	(0)	3100174
326	30.2	10.9	0.0	chr5	34718324	34718502	(146819757)	C	Charlie23a	DNA/hAT-Charlie	(1)	338	138	3100286
500	27.6	3.0	5.2	chr5	34718649	34718820	(146819439)	+	MIRb	SINE/MIR	25	192	(76)	3100287
265	23.6	4.3	9.2	chr5	34755873	34755970	(146782289)	C	MIR	SINE/MIR	(131)	131	39	3100359
1303	18.0	9.0	21.1	chr5	35647125	35647660	(145890599)	C	MSTA1	LTR/ERVL-MaLR	(0)	465	1	3101693
17	15.4	4.7	0.0	chr5	36241269	36241311	(145296948)	+	(CTCTCC)n	Simple_repeat	1	45	(0)	3102471
236	25.4	36.3	3.9	chr5	36614017	36614143	(144924116)	+	MIR	SINE/MIR	2	169	(99)	3103086
446	28.8	0.8	0.8	chr5	36744029	36744161	(144794098)	+	MIR	SINE/MIR	2	134	(128)	3103276
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
15	12.6	0.0	0.0	chr5	36876989	36877015	(144661244)	+	(GGA)n	Simple_repeat	1	27	(0)	3103487
19	4.0	0.0	0.0	chr5	36877200	36877225	(144661034)	+	(CGG)n	Simple_repeat	1	26	(0)	3103488
377	22.6	17.6	5.6	chr5	37073791	37074113	(144464146)	C	HAL1	LINE/L1	(59)	2448	2079	3103789
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
1304	25.5	2.3	0.3	chr5	37847817	37848115	(143690144)	+	MLT1H	LTR/ERVL-MaLR	2	306	(243)	3105117
14	28.5	2.9	2.8	chr5	38515592	38515660	(143022599)	+	G-rich	Low_complexity	1	71	(0)	3106232
412	21.4	0.0	1.0	chr5	38515666	38515764	(143022495)	+	HAL1	LINE/L1	2303	2400	(107)	3106228
12	19.5	2.9	0.0	chr5	38846052	38846086	(142692173)	+	(CGCCCCG)n	Simple_repeat	1	36	(0)	3106772
98	4.8	0.0	0.0	chr5	39006682	39006790	(142531469)	+	(GGAGGGGAGA)n	Simple_repeat	1	109	(0)	3106948
12	19.8	3.9	5.6	chr5	42423657	42423708	(139114551)	+	(CCCT)n	Simple_repeat	1	54	(0)	3111600
36	27.6	2.4	0.8	chr5	42423774	42423896	(139114363)	+	(GCG)n	Simple_repeat	1	126	(0)	3111601
2106	10.1	1.7	0.0	chr5	43008369	43008655	(138529604)	C	AluSz	SINE/Alu	(20)	292	1	3112397
200	34.9	5.3	4.5	chr5	43210016	43210147	(138328112)	C	L2b	LINE/L2	(96)	3279	3147	3112749
35	11.8	0.0	0.0	chr5	43210158	43210214	(138328045)	+	(GAGGG)n	Simple_repeat	1	57	(0)	3112750
348	28.2	19.2	4.8	chr5	43210361	43210669	(138327590)	C	L2c	LINE/L2	(0)	3387	3024	3112751
20	21.8	1.9	0.0	chr5	43556761	43556813	(137981446)	+	(CCGGCC)n	Simple_repeat	1	54	(0)	3113263
18	4.1	0.0	0.0	chr5	43556848	43556872	(137981387)	+	(CTC)n	Simple_repeat	1	25	(0)	3113264
14432	14.2	2.0	3.8	chr5	43571513	43574022	(137964237)	C	LTR49-int	LTR/ERV1	(87)	6244	3774	3113279
11	24.1	2.6	0.0	chr5	43603102	43603140	(137935119)	+	G-rich	Low_complexity	1	40	(0)	3113334
34	5.3	0.0	0.0	chr5	50666898	50666937	(130871322)	+	(CCT)n	Simple_repeat	1	40	(0)	3116800
19	12.1	0.0	0.0	chr5	53426101	53426128	(128112131)	+	(A)n	Simple_repeat	1	28	(0)	3120238
368	23.8	0.0	0.0	chr5	53426175	53426258	(128112001)	C	MamRep564	Unknown	(74)	283	200	3120239
366	28.2	11.2	0.7	chr5	53426314	53426456	(128111803)	C	MamRep1879	DNA/hAT-Tip100?	(41)	175	16	3120240
568	11.2	4.8	0.0	chr5	54303601	54303680	(127234579)	+	AluSz6	SINE/Alu	224	307	(5)	3121519
24	13.6	0.0	0.0	chr5	54303731	54303772	(127234487)	+	(AGGGG)n	Simple_repeat	1	42	(0)	3121520
308	33.6	0.9	0.0	chr5	54520572	54520678	(127017581)	C	L3	LINE/CR1	(125)	3974	3867	3121858
2196	24.6	6.1	3.2	chr5	57036810	57037401	(124500858)	+	Zaphod	DNA/hAT-Tip100	1	610	(3421)	3125952
485	20.6	21.1	2.4	chr5	57037399	57037567	(124500692)	+	LTR50	LTR/ERVL	18	226	(569)	3125953
355	27.0	13.1	0.0	chr5	57037616	57037741	(124500518)	+	LTR50	LTR/ERVL	328	472	(323)	3125953
886	31.0	4.5	0.3	chr5	57111939	57112320	(124425939)	C	LTR33	LTR/ERVL	(116)	399	1	3126125
188	27.1	7.8	11.3	chr5	57112405	57112537	(124425722)	+	MIR	SINE/MIR	125	252	(10)	3126126
581	26.3	9.2	4.3	chr5	57494370	57494719	(124043540)	+	HAL1	LINE/L1	1	369	(2138)	3126846
1256	21.0	1.9	2.2	chr5	57494779	57495094	(124043165)	C	MLT1H	LTR/ERVL-MaLR	(228)	321	7	3126847
535	23.5	3.8	7.3	chr5	58412916	58413080	(123125179)	+	MER58A	DNA/hAT-Charlie	45	203	(21)	3128077
17	8.6	5.1	2.4	chr5	59127601	59127639	(122410620)	+	(CCCCACC)n	Simple_repeat	1	41	(0)	3129093
2939	16.4	4.4	2.6	chr5	59300587	59301126	(122237133)	C	MER21A	LTR/ERVL	(6)	925	376	3129338
309	30.5	3.0	2.3	chr5	59301077	59301207	(122237052)	C	MER39B	LTR/ERV1	(252)	401	270	3129339
1193	12.2	16.3	0.0	chr5	59301132	59301352	(122236907)	C	MER21A	LTR/ERVL	(667)	264	1	3129340
15	17.8	2.6	0.0	chr5	61333331	61333368	(120204891)	+	(GGCGG)n	Simple_repeat	1	39	(0)	3132110
216	10.5	2.6	5.0	chr5	61468029	61468068	(120070191)	C	L2c	LINE/L2	(12)	3375	3337	3132313
604	26.7	8.0	4.2	chr5	61468035	61468249	(120070010)	C	MIRb	SINE/MIR	(15)	253	30	3132314
925	33.7	16.5	4.8	chr5	65828031	65828781	(115709478)	+	L3	LINE/CR1	3295	4093	(6)	3138470
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
13	30.8	0.0	3.2	chr5	66144565	66144627	(115393632)	+	G-rich	Low_complexity	1	63	(0)	3139020
354	30.2	12.8	4.2	chr5	66601315	66601844	(114936415)	C	L2c	LINE/L2	(6)	3381	2797	3139680
264	33.6	11.4	2.7	chr5	66891319	66891719	(114646540)	+	L2	LINE/L2	2643	3082	(337)	3140079
16	0.0	0.0	0.0	chr5	66958958	66958974	(114579285)	+	(A)n	Simple_repeat	1	17	(0)	3140185
375	25.0	4.2	9.3	chr5	67015957	67016106	(114522153)	C	L2c	LINE/L2	(1)	3386	3245	3140258
543	28.8	0.8	0.0	chr5	67016188	67016319	(114521940)	C	MIRb	SINE/MIR	(71)	197	65	3140259
610	25.3	0.6	1.2	chr5	67400755	67400922	(114137337)	C	MER58C	DNA/hAT-Charlie	(6)	209	43	3140763
89	25.6	2.0	0.8	chr5	67720399	67720643	(113817616)	+	(CCCTC)n	Simple_repeat	1	250	(0)	3141184
2479	7.3	0.3	0.0	chr5	69093402	69093702	(112444557)	+	AluSp	SINE/Alu	1	302	(11)	3143233
225	30.1	8.2	1.6	chr5	71694268	71694392	(109843867)	C	L1MEc	LINE/L1	(6183)	217	84	3147923
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
1245	17.7	1.1	2.6	chr5	72819014	72819280	(108718979)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	195	3149555
387	13.8	0.0	0.0	chr5	72819285	72819342	(108718917)	C	MSTB2	LTR/ERVL-MaLR	(399)	58	1	3149555
711	24.8	10.4	1.9	chr5	73202250	73202520	(108335739)	C	MamRep4096	DNA/hAT-Tip100	(13)	413	117	3150160
171	15.5	0.9	2.1	chr5	73312835	73313159	(108225100)	+	(CCT)n	Simple_repeat	1	328	(0)	3150305
13	14.7	0.0	3.1	chr5	73339100	73339131	(108199128)	+	(CCCTCC)n	Simple_repeat	1	32	(0)	3150342
13	11.2	3.2	3.1	chr5	73438263	73438293	(108099966)	+	G-rich	Low_complexity	1	32	(0)	3150476
17	4.9	0.0	0.0	chr5	73438389	73438409	(108099850)	+	(A)n	Simple_repeat	1	21	(0)	3150477
21	21.1	0.0	0.0	chr5	73448242	73448300	(108089959)	+	(CGTCCT)n	Simple_repeat	1	59	(0)	3150486
237	26.2	3.5	2.3	chr5	74412327	74412412	(107125847)	+	MLT1K	LTR/ERVL-MaLR	353	439	(156)	3151935
84	14.0	4.3	4.1	chr5	74423425	74423633	(107114626)	+	GA-rich	Low_complexity	1	218	(0)	3151953
3048	11.7	2.1	1.2	chr5	74423648	74424071	(107114188)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3151954
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
2727	6.8	0.3	0.0	chr5	74684666	74684976	(106853283)	C	AluSx1	SINE/Alu	(0)	312	1	3152358
12	18.1	0.0	3.0	chr5	74685110	74685142	(106853117)	+	G-rich	Low_complexity	1	33	(0)	3152359
480	20.0	12.9	0.0	chr5	75275698	75275812	(106262447)	C	MIRb	SINE/MIR	(46)	222	91	3153287
507	33.0	5.5	5.8	chr5	75275815	75276161	(106262098)	C	LTR79	LTR/ERVL	(162)	365	20	3153288
12	19.5	2.6	2.6	chr5	75511521	75511558	(106026701)	+	A-rich	Low_complexity	1	39	(0)	3153649
23	17.1	1.3	7.7	chr5	75511631	75511707	(106026552)	+	(CCCTC)n	Simple_repeat	1	78	(0)	3153650
18	6.5	2.9	2.9	chr5	76083282	76083315	(105454944)	+	(AGG)n	Simple_repeat	1	35	(0)	3154463
403	27.0	7.4	0.0	chr5	76474099	76474224	(105064035)	C	MIR3	SINE/MIR	(52)	156	21	3155091
2277	5.4	1.8	0.4	chr5	77080669	77080947	(104457312)	+	L1PA6	LINE/L1	5872	6154	(0)	3156148
676	29.4	6.5	1.3	chr5	77081020	77081326	(104456933)	+	L1M5	LINE/L1	5265	5588	(535)	3156149
241	26.9	2.5	4.7	chr5	77748281	77748370	(103789889)	+	MIRc	SINE/MIR	57	146	(116)	3157107
27	16.0	1.7	1.7	chr5	77852620	77852705	(103685554)	+	GA-rich	Low_complexity	1	86	(0)	3157272
36	0.0	0.0	0.0	chr5	77852876	77852906	(103685353)	+	(CA)n	Simple_repeat	1	31	(0)	3157273
17	22.2	1.8	3.5	chr5	78610740	78610795	(102927464)	+	(TCCC)n	Simple_repeat	1	57	(0)	3158327
279	29.9	7.3	7.3	chr5	78627354	78627490	(102910769)	+	Tigger16a	DNA/TcMar-Tigger	77	213	(744)	3158351
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
17	7.8	0.0	0.0	chr5	78667783	78667809	(102870450)	+	(TATTT)n	Simple_repeat	1	27	(0)	3158404
36	29.3	0.9	0.9	chr5	78667878	78667990	(102870269)	+	(CTC)n	Simple_repeat	1	114	(0)	3158405
15	27.3	1.9	1.8	chr5	79018931	79018984	(102519275)	+	(CTTCT)n	Simple_repeat	1	55	(0)	3158933
54	22.9	1.4	2.0	chr5	79134001	79134145	(102404114)	+	GA-rich	Low_complexity	1	147	(0)	3159133
11870	12.9	5.0	3.9	chr5	79255397	79256522	(102281737)	C	L1M1	LINE/L1	(5410)	2155	1008	3159426
296	33.6	6.1	7.7	chr5	79420343	79420642	(102117617)	+	L2b	LINE/L2	3026	3320	(55)	3159705
194	23.3	0.0	2.3	chr5	79508148	79508191	(102030068)	+	L2c	LINE/L2	2820	2862	(557)	3159868
875	26.2	16.0	2.1	chr5	79793680	79794108	(101744151)	C	LTR79	LTR/ERVL	(14)	513	14	3160367
790	21.4	14.3	0.5	chr5	79794143	79794335	(101743924)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	3160368
184	27.8	18.9	1.5	chr5	79991496	79991630	(101546629)	+	MIR	SINE/MIR	89	252	(10)	3160667
2344	18.4	13.2	2.0	chr5	80623014	80623570	(100914689)	+	L1ME2z	LINE/L1	5802	6437	(7)	3161927
16	3.3	0.0	12.2	chr5	81402462	81402502	(100135757)	+	G-rich	Low_complexity	1	41	(0)	3163111
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
16	22.3	0.0	2.3	chr5	83471655	83471698	(98066561)	+	(CCT)n	Simple_repeat	1	44	(0)	3166013
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
3545	8.1	0.2	0.2	chr5	84292760	84293218	(97245041)	C	LTR71A	LTR/ERV1	(0)	459	1	3167054
15	17.6	6.7	0.0	chr5	84384898	84384942	(97153317)	+	(GCCC)n	Simple_repeat	1	48	(0)	3167186
36	18.7	5.8	0.0	chr5	84384961	84385047	(97153212)	+	(TC)n	Simple_repeat	1	92	(0)	3167187
1896	13.7	0.3	3.9	chr5	84817843	84818148	(96720111)	C	AluSz	SINE/Alu	(17)	295	1	3167757
22	8.8	0.0	2.6	chr5	84818181	84818219	(96720040)	+	(TCCCC)n	Simple_repeat	1	39	(0)	3167758
1963	13.4	0.4	0.4	chr5	84818234	84818508	(96719751)	C	AluSz6	SINE/Alu	(37)	275	1	3167759
107	28.2	2.0	5.8	chr5	84863150	84863563	(96674696)	+	(TTCC)n	Simple_repeat	1	395	(0)	3167815
17	28.8	1.6	1.6	chr5	87267811	87267873	(94270386)	+	(CTCC)n	Simple_repeat	1	64	(0)	3170894
19	26.6	0.0	0.0	chr5	87268723	87268776	(94269483)	+	(CTG)n	Simple_repeat	1	54	(0)	3170897
22	8.1	0.0	6.7	chr5	88141323	88141367	(93396892)	+	(GGA)n	Simple_repeat	1	45	(0)	3171928
107	3.6	0.9	0.0	chr5	88676322	88676436	(92861823)	+	(TCC)n	Simple_repeat	1	116	(0)	3172658
42	8.0	0.0	0.0	chr5	88683985	88684038	(92854221)	+	(GT)n	Simple_repeat	1	54	(0)	3172664
23	15.1	3.0	5.8	chr5	88827215	88827281	(92710978)	+	(CCTC)n	Simple_repeat	1	69	(0)	3172837
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
913	24.2	17.6	1.5	chr5	90390842	90391296	(91146963)	+	LTR50	LTR/ERVL	1	632	(163)	3174692
248	31.3	10.4	3.0	chr5	90410217	90410384	(91127875)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	3174712
13	13.8	5.5	6.9	chr5	90529555	90529609	(91008650)	+	(TCCGCC)n	Simple_repeat	1	58	(0)	3174918
13	9.7	0.0	0.0	chr5	92641862	92641883	(88896376)	+	(TGT)n	Simple_repeat	1	22	(0)	3177699
25	14.4	4.2	0.0	chr5	93152516	93152563	(88385696)	+	(CT)n	Simple_repeat	1	50	(0)	3178330
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
17	15.2	4.3	2.1	chr5	93582091	93582136	(87956123)	+	(CCTCTC)n	Simple_repeat	1	48	(0)	3178829
16	16.8	0.0	0.0	chr5	93582272	93582299	(87955960)	+	A-rich	Low_complexity	1	28	(0)	3178830
1822	23.0	10.9	2.4	chr5	93967297	93967830	(87570429)	+	L1MCa	LINE/L1	245	829	(5922)	3179277
17	21.0	0.0	5.5	chr5	95284055	95284109	(86254150)	+	GA-rich	Low_complexity	1	55	(0)	3180923
42	15.6	2.3	1.1	chr5	95284570	95284656	(86253603)	+	(CTC)n	Simple_repeat	1	89	(0)	3180924
22	9.5	0.0	0.0	chr5	95284666	95284699	(86253560)	+	(GCG)n	Simple_repeat	1	34	(0)	3180925
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
2050	14.9	0.7	0.0	chr5	95743714	95744008	(85794251)	C	AluSz	SINE/Alu	(15)	297	1	3181598
69	25.3	3.0	1.0	chr5	95744009	95744104	(85794155)	+	(CCTC)n	Simple_repeat	4	102	(0)	3181599
242	24.3	3.9	1.3	chr5	95744108	95744182	(85794077)	C	L1M6B	LINE/L1	(274)	95	19	3181600
607	33.8	9.8	3.2	chr5	95744194	95744535	(85793724)	+	L2c	LINE/L2	3021	3387	(0)	3181586
11	22.5	3.5	5.1	chr5	96297403	96297459	(85240800)	+	(TGTTGC)n	Simple_repeat	1	59	(0)	3182389
1222	22.9	6.0	4.0	chr5	96640578	96640951	(84897308)	C	LTR16A	LTR/ERVL	(69)	382	1	3182872
22	3.3	0.0	3.0	chr5	96662314	96662346	(84875913)	+	(CCCT)n	Simple_repeat	1	33	(0)	3182909
266	29.8	10.2	0.0	chr5	98768178	98768291	(82769968)	C	MIRb	SINE/MIR	(138)	130	4	3185537
17	9.3	0.0	7.5	chr5	98928662	98928701	(82609558)	+	G-rich	Low_complexity	1	40	(0)	3185758
30	31.9	0.0	5.2	chr5	98928804	98928956	(82609303)	+	(CGC)n	Simple_repeat	1	153	(0)	3185759
5495	20.1	5.0	1.3	chr5	102561733	102563830	(78974429)	+	L1MA4	LINE/L1	1238	3399	(4166)	3190295
18	28.4	3.1	4.0	chr5	103041062	103041086	(78497173)	+	(TAGA)n	Simple_repeat	1	49	(51)	3190899
13	21.2	0.0	6.1	chr5	103041087	103041135	(78497124)	+	(ATAATAA)n	Simple_repeat	1	49	(0)	3190900
18	28.4	3.1	4.0	chr5	103041136	103041158	(78497101)	+	(TAGA)n	Simple_repeat	50	100	(0)	3190899
24	6.3	2.9	0.0	chr5	107513246	107513279	(74024980)	+	(AG)n	Simple_repeat	1	35	(0)	3196442
13	14.1	0.0	5.7	chr5	107672698	107672732	(73865527)	+	(CCCCTC)n	Simple_repeat	1	35	(0)	3196634
32	7.3	0.0	0.0	chr5	108381006	108381048	(73157211)	+	(CCG)n	Simple_repeat	1	43	(0)	3197552
13	29.5	0.0	2.0	chr5	109409882	109409932	(72128327)	+	(CCT)n	Simple_repeat	1	51	(0)	3198947
28	7.5	0.0	2.3	chr5	109409942	109409985	(72128274)	+	(GCG)n	Simple_repeat	1	44	(0)	3198948
376	33.3	2.2	3.3	chr5	109455991	109456170	(72082089)	+	L1ME4b	LINE/L1	703	880	(12)	3199014
20	30.0	3.5	0.0	chr5	109689790	109689874	(71848385)	+	(GCG)n	Simple_repeat	1	88	(0)	3199330
20	25.9	5.6	1.1	chr5	111224137	111224183	(70314076)	+	G-rich	Low_complexity	1	91	(0)	3201161
13	15.8	2.6	5.0	chr5	111224184	111224222	(70314037)	+	GA-rich	Low_complexity	1	40	(0)	3201162
12	12.2	10.8	0.0	chr5	111496734	111496770	(70041489)	+	GA-rich	Low_complexity	1	41	(0)	3201508
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
15	24.9	0.0	0.0	chr5	111758220	111758253	(69780006)	+	(CA)n	Simple_repeat	1	34	(0)	3201828
15	19.4	0.0	4.4	chr5	112707984	112708028	(68830231)	+	(CTCTCCC)n	Simple_repeat	1	45	(0)	3203153
228	27.8	15.9	2.0	chr5	112918605	112918857	(68619402)	+	L2	LINE/L2	2783	3077	(342)	3203522
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
12	12.5	0.0	3.6	chr5	113330679	113330706	(68207553)	+	A-rich	Low_complexity	1	28	(0)	3204132
226	30.1	8.9	2.0	chr5	115203416	115203561	(66334698)	+	LTR81B	LTR/Gypsy	548	704	(646)	3206442
389	23.3	21.1	0.6	chr5	115203648	115203824	(66334435)	+	LTR81B	LTR/Gypsy	771	993	(357)	3206442
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
20	0.0	0.0	0.0	chr5	115602583	115602604	(65935655)	+	(T)n	Simple_repeat	1	22	(0)	3207032
15	23.0	0.0	0.0	chr5	116510690	116510726	(65027533)	+	(CTCC)n	Simple_repeat	1	37	(0)	3208216
18	4.8	0.0	0.0	chr5	116575153	116575174	(64963085)	+	(A)n	Simple_repeat	1	22	(0)	3208282
12403	17.6	3.1	3.2	chr5	118968363	118970144	(62568115)	+	L1PA10	LINE/L1	24	1762	(4721)	3211577
23	32.2	1.0	1.9	chr5	119268626	119268728	(62269531)	+	(CCCGC)n	Simple_repeat	1	104	(0)	3212077
1841	16.8	0.3	4.6	chr5	119318292	119318595	(62219664)	C	AluJb	SINE/Alu	(21)	291	1	3212163
13	21.8	2.6	0.0	chr5	119318679	119318716	(62219543)	+	(CCTGCC)n	Simple_repeat	1	39	(0)	3212164
616	29.5	11.4	16.5	chr5	119320276	119320934	(62217325)	+	L2a	LINE/L2	1675	2223	(1196)	3212167
380	32.7	5.0	0.0	chr5	119418741	119419053	(62119206)	+	L2a	LINE/L2	2810	3191	(235)	3212298
227	28.6	1.1	2.1	chr5	119453232	119453324	(62084935)	C	MER102b	DNA/hAT-Charlie	(0)	341	250	3212327
20	23.1	2.9	2.8	chr5	122372789	122372858	(59165401)	+	(TCCT)n	Simple_repeat	1	72	(0)	3215824
248	35.7	10.1	8.0	chr5	122493927	122494188	(59044071)	+	L2b	LINE/L2	3108	3375	(0)	3215969
14	18.9	2.8	0.0	chr5	123035496	123035531	(58502728)	+	(CCT)n	Simple_repeat	1	37	(0)	3216854
40	18.3	4.5	1.7	chr5	123089023	123089029	(58449230)	+	(TCCCTC)n	Simple_repeat	1	43	(64)	3216921
14	14.8	2.4	4.8	chr5	123089030	123089070	(58449189)	+	(TCCCC)n	Simple_repeat	1	42	(0)	3216922
40	18.3	4.5	1.7	chr5	123089071	123089077	(58449182)	+	(TCCCTC)n	Simple_repeat	44	107	(0)	3216921
48	1.8	0.0	0.0	chr5	123089078	123089126	(58449133)	+	(TC)n	Simple_repeat	1	49	(0)	3216923
76	0.0	0.0	0.0	chr5	123089127	123089191	(58449068)	+	(CA)n	Simple_repeat	1	65	(0)	3216924
312	28.2	17.3	2.0	chr5	123273884	123274136	(58264123)	C	L1ME4c	LINE/L1	(264)	566	267	3217149
33	21.2	4.4	0.0	chr5	123434888	123434977	(58103282)	+	G-rich	Low_complexity	1	94	(0)	3217366
195	36.1	1.7	3.2	chr5	124309692	124309814	(57228445)	+	L2c	LINE/L2	3258	3378	(9)	3218504
12	21.7	0.0	0.0	chr5	124309841	124309872	(57228387)	+	G-rich	Low_complexity	1	32	(0)	3218505
19	8.1	0.0	0.0	chr5	124747158	124747183	(56791076)	+	(T)n	Simple_repeat	1	26	(0)	3219049
15	31.3	0.0	0.0	chr5	124747601	124747647	(56790612)	+	(CC)n	Simple_repeat	1	47	(0)	3219050
14	16.5	2.9	0.0	chr5	124755927	124755960	(56782299)	+	(TCCTT)n	Simple_repeat	1	35	(0)	3219059
1774	18.0	8.6	1.5	chr5	126108513	126108909	(55429350)	+	MER61C	LTR/ERV1	14	425	(3)	3220789
10906	15.2	2.9	4.8	chr5	126673481	126674805	(54863454)	C	HERVH-int	LTR/ERV1	(5556)	2157	848	3221678
12	6.9	5.9	5.6	chr5	126836886	126836919	(54701340)	+	GA-rich	Low_complexity	1	36	(0)	3222077
280	33.3	2.0	10.0	chr5	126875783	126876002	(54662257)	C	MIRb	SINE/MIR	(37)	231	30	3222125
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
23	13.4	4.1	0.0	chr5	128201176	128201224	(53337035)	+	(TCCT)n	Simple_repeat	1	51	(0)	3223866
11	17.7	5.0	2.4	chr5	128539199	128539238	(52999021)	+	(CGCGGC)n	Simple_repeat	1	42	(0)	3224263
1992	25.0	10.4	6.1	chr5	131523415	131524492	(50013767)	+	L1MEg	LINE/L1	896	2024	(4218)	3228098
311	15.7	1.4	1.4	chr5	131524475	131524545	(50013714)	+	L1MEg	LINE/L1	2264	2334	(3812)	3228098
47	11.1	3.8	0.0	chr5	131524555	131524633	(50013626)	+	(GA)n	Simple_repeat	1	82	(0)	3228101
1984	16.0	0.0	0.0	chr5	131524634	131524915	(50013344)	C	AluSx	SINE/Alu	(30)	282	1	3228102
14	14.6	8.5	2.0	chr5	132437818	132437864	(49100395)	+	G-rich	Low_complexity	1	51	(0)	3229367
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
24	8.6	0.0	2.5	chr5	132776152	132776191	(48762068)	+	(CCT)n	Simple_repeat	1	40	(0)	3229897
240	11.1	11.5	0.0	chr5	132788539	132788592	(48749667)	C	MLT1L	LTR/ERVL-MaLR	(528)	82	22	3229917
325	31.1	6.4	0.0	chr5	132788833	132788964	(48749295)	C	L2c	LINE/L2	(2)	3385	3245	3229918
269	30.4	15.0	0.0	chr5	132790214	132790338	(48747921)	C	L2c	LINE/L2	(0)	3387	3241	3229920
231	32.1	11.6	4.5	chr5	132797764	132798164	(48740095)	C	L2a	LINE/L2	(551)	2868	2436	3229913
624	28.0	8.5	12.9	chr5	133130418	133130913	(48407346)	C	MLT1O	LTR/ERVL-MaLR	(28)	514	43	3230606
207	36.3	5.2	4.5	chr5	134112131	134112398	(47425861)	+	L2b	LINE/L2	3080	3349	(26)	3231961
2546	6.9	1.0	0.7	chr5	134367369	134367673	(47170586)	C	AluSx	SINE/Alu	(6)	306	1	3232415
1558	17.4	3.7	3.3	chr5	134658407	134658705	(46879554)	C	AluJo	SINE/Alu	(12)	300	1	3233027
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
980	13.7	4.7	5.2	chr5	134851442	134851633	(46686626)	+	MER20	DNA/hAT-Charlie	29	219	(0)	3233513
13	26.1	0.0	0.0	chr5	135034704	135034744	(46503515)	+	G-rich	Low_complexity	1	41	(0)	3233799
197	30.6	5.5	6.8	chr5	135042574	135042720	(46495539)	+	L2a	LINE/L2	3221	3365	(61)	3233807
190	36.1	3.5	0.0	chr5	135380051	135380133	(46158126)	+	L2	LINE/L2	2022	2107	(1312)	3234209
211	31.9	2.7	0.0	chr5	135380164	135380235	(46158024)	C	L2b	LINE/L2	(5)	3370	3297	3234210
14	14.2	3.2	0.0	chr5	135399062	135399092	(46139167)	+	(GCG)n	Simple_repeat	1	32	(0)	3234230
17	22.6	1.4	5.7	chr5	135399286	135399360	(46138899)	+	(CGGCCC)n	Simple_repeat	1	71	(0)	3234231
14	18.2	0.0	0.0	chr5	135401184	135401214	(46137045)	+	(GCT)n	Simple_repeat	1	31	(0)	3234234
16	19.4	2.4	0.0	chr5	135489093	135489133	(46049126)	+	G-rich	Low_complexity	1	42	(0)	3234367
778	28.1	4.2	5.0	chr5	135560576	135560815	(45977444)	C	MIRb	SINE/MIR	(30)	238	1	3234473
11	24.6	0.0	2.5	chr5	135888409	135888448	(45649811)	+	(CTCCAGT)n	Simple_repeat	1	40	(0)	3234910
15	15.9	2.9	0.0	chr5	135894938	135894972	(45643287)	+	G-rich	Low_complexity	1	36	(0)	3234923
247	29.7	3.3	4.1	chr5	136132336	136132458	(45405801)	+	MamRep1879	DNA/hAT-Tip100?	8	129	(87)	3235277
13	10.8	6.7	0.0	chr5	136132815	136132844	(45405415)	+	(CCTC)n	Simple_repeat	1	32	(0)	3235278
1130	19.2	1.4	1.4	chr5	136427911	136428126	(45110133)	C	MIR	SINE/MIR	(34)	228	13	3235672
29	17.2	0.0	0.0	chr5	136428158	136428212	(45110047)	+	(CCCCT)n	Simple_repeat	1	55	(0)	3235673
222	27.1	15.0	4.8	chr5	137075305	137075471	(44462788)	+	L2c	LINE/L2	3180	3378	(9)	3236466
20	17.5	5.4	1.7	chr5	137754199	137754254	(43784005)	+	GA-rich	Low_complexity	1	59	(0)	3237463
15	18.1	0.0	0.0	chr5	137754305	137754336	(43783923)	+	(GCC)n	Simple_repeat	1	32	(0)	3237464
12477	12.8	7.8	5.4	chr5	137901167	137902541	(43635718)	+	Tigger2	DNA/TcMar-Tigger	960	2493	(225)	3237722
309	10.2	0.0	0.0	chr5	137902535	137902583	(43635676)	C	Alu	SINE/Alu	(12)	289	241	3237724
306	16.0	0.0	0.0	chr5	138231537	138231586	(43306673)	C	MIR	SINE/MIR	(0)	262	213	3238413
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
15	4.1	4.0	0.0	chr5	138465013	138465037	(43073222)	+	(AGGG)n	Simple_repeat	1	26	(0)	3238915
284	28.6	16.0	2.1	chr5	138943572	138944034	(42594225)	+	L2a	LINE/L2	2816	3426	(0)	3239856
463	34.1	3.0	0.0	chr5	138965264	138965427	(42572832)	+	MamTip2	DNA/hAT-Tip100	38	206	(99)	3239882
445	32.1	11.4	3.5	chr5	139178388	139178892	(42359367)	+	L2c	LINE/L2	2843	3387	(0)	3240227
698	15.9	1.7	0.0	chr5	139210666	139210776	(42327483)	C	Tigger3c	DNA/TcMar-Tigger	(0)	602	490	3240293
1892	11.4	1.2	6.4	chr5	139210777	139211170	(42327089)	+	Charlie3	DNA/hAT-Charlie	1	339	(0)	3240294
12	17.5	0.0	6.7	chr5	139248384	139248411	(42289848)	+	GA-rich	Low_complexity	1	26	(0)	3240394
1966	10.1	0.0	2.9	chr5	139296908	139297185	(42241074)	+	AluSx1	SINE/Alu	21	290	(22)	3240509
12	12.2	3.7	0.0	chr5	139380910	139380936	(42157323)	+	G-rich	Low_complexity	1	28	(0)	3240667
283	32.7	12.0	1.0	chr5	139439598	139439804	(42098455)	+	MIRc	SINE/MIR	2	234	(34)	3240769
2323	15.2	0.5	1.5	chr5	139484515	139484907	(42053352)	+	MER39B	LTR/ERV1	265	653	(0)	3240852
21	18.5	0.0	0.0	chr5	139561527	139561569	(41976690)	+	(GGC)n	Simple_repeat	1	43	(0)	3241047
21	8.1	5.1	0.0	chr5	139561727	139561765	(41976494)	+	(CCCCGT)n	Simple_repeat	1	41	(0)	3241048
18	25.5	1.6	1.6	chr5	139561766	139561788	(41976471)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	3241049
15	15.5	3.4	8.2	chr5	139648213	139648271	(41889988)	+	GA-rich	Low_complexity	1	61	(0)	3241240
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
12	9.1	7.7	4.8	chr5	139648420	139648458	(41889801)	+	(AGAGC)n	Simple_repeat	1	42	(0)	3241242
14	9.6	0.0	0.0	chr5	139648803	139648825	(41889434)	+	(GCG)n	Simple_repeat	1	23	(0)	3241244
13	33.9	1.5	0.0	chr5	139648864	139648892	(41889367)	+	(CCCTCC)n	Simple_repeat	1	66	(0)	3241245
760	17.7	0.0	3.1	chr5	139734867	139735029	(41803230)	C	Charlie1a	DNA/hAT-Charlie	(0)	1455	1298	3241415
112	17.4	2.5	2.0	chr5	139792694	139792938	(41745321)	+	(CTTT)n	Simple_repeat	1	251	(0)	3241537
20	20.9	7.5	3.0	chr5	139795707	139795827	(41742432)	+	(CCCT)n	Simple_repeat	1	126	(0)	3241544
602	36.4	3.9	5.4	chr5	139955014	139955478	(41582781)	C	L2b	LINE/L2	(0)	3375	2918	3241768
249	29.0	14.6	2.6	chr5	139955854	139955993	(41582266)	+	MIRc	SINE/MIR	58	222	(46)	3241770
370	34.1	6.1	4.2	chr5	140025954	140026359	(41511900)	C	L2c	LINE/L2	(183)	3204	2790	3241879
13	19.6	0.0	6.5	chr5	140042293	140042340	(41495919)	+	(CACCCC)n	Simple_repeat	1	44	(0)	3241896
284	33.3	1.0	1.0	chr5	140241349	140241445	(41296814)	+	MIRb	SINE/MIR	164	260	(8)	3242234
248	27.0	7.4	4.8	chr5	140349355	140349459	(41188800)	C	MIR3	SINE/MIR	(75)	133	26	3242430
13	18.4	0.0	0.0	chr5	140966427	140966457	(40571802)	+	(CCCCCT)n	Simple_repeat	1	31	(0)	3243428
676	30.7	12.2	4.8	chr5	141634180	141634687	(39903572)	+	L2b	LINE/L2	2831	3375	(0)	3244318
21	17.6	1.9	1.9	chr5	141636810	141636862	(39901397)	+	(CCCGCCG)n	Simple_repeat	1	54	(0)	3244320
22	23.6	1.5	1.5	chr5	141682231	141682296	(39855963)	+	(CCCGC)n	Simple_repeat	1	67	(0)	3244398
19	30.9	1.0	4.8	chr5	141744210	141744311	(39793948)	+	G-rich	Low_complexity	1	103	(0)	3244519
18	10.6	0.0	9.8	chr5	141747419	141747469	(39790790)	+	G-rich	Low_complexity	1	51	(0)	3244527
16	14.0	2.3	4.5	chr5	141778451	141778493	(39759766)	+	G-rich	Low_complexity	1	44	(0)	3244587
239	24.4	20.1	0.0	chr5	141960648	141960770	(39577489)	C	MIR	SINE/MIR	(28)	234	81	3244956
349	24.4	10.9	0.0	chr5	142087845	142087967	(39450292)	+	MER117	DNA/hAT-Charlie	29	166	(31)	3245223
447	28.5	2.8	1.7	chr5	142088104	142088278	(39449981)	+	MamRep564	Unknown	67	243	(114)	3245224
528	27.7	10.2	3.9	chr5	142279616	142280024	(39258235)	C	L2c	LINE/L2	(1)	3425	2912	3245625
522	24.8	1.7	0.0	chr5	142280077	142280189	(39258070)	C	MIR	SINE/MIR	(72)	190	76	3245626
32	2.4	2.1	4.2	chr5	142287996	142288042	(39250217)	+	(AAAC)n	Simple_repeat	1	48	(0)	3245649
18	4.7	0.0	0.0	chr5	142307008	142307029	(39231230)	+	(T)n	Simple_repeat	1	22	(0)	3245700
12	20.5	2.9	0.0	chr5	142551952	142551985	(38986274)	+	(CCTCC)n	Simple_repeat	1	35	(0)	3246224
17	4.5	0.0	0.0	chr5	142839878	142839893	(38698366)	+	(GA)n	Simple_repeat	1	16	(0)	3246753
30	0.0	0.0	0.0	chr5	142839894	142839922	(38698337)	+	(GGAGG)n	Simple_repeat	1	29	(0)	3246754
767	25.2	3.5	2.5	chr5	142839931	142840129	(38698130)	C	MLT1G3	LTR/ERVL-MaLR	(394)	201	1	3246755
41149	4.9	1.5	1.0	chr5	143092464	143094506	(38443753)	C	HERVIP10FH-int	LTR/ERV1	(3069)	2033	3	3247156
2780	23.6	14.5	3.5	chr5	143580748	143582329	(37955930)	C	L2a	LINE/L2	(16)	3410	1627	3247918
271	17.0	5.4	0.0	chr5	143898499	143898551	(37639708)	C	L2a	LINE/L2	(1)	3425	3370	3248440
374	26.5	8.7	2.7	chr5	143898542	143898691	(37639568)	+	MIRb	SINE/MIR	77	236	(32)	3248441
288	30.4	11.4	10.8	chr5	145965659	145966293	(35571966)	C	L2b	LINE/L2	(0)	3375	2694	3251609
207	33.3	8.1	0.0	chr5	147484032	147484133	(34054126)	C	MamSINE1	SINE/tRNA-RTE	(179)	111	1	3254328
393	31.8	0.0	0.8	chr5	147484267	147484396	(34053863)	+	UCON78	DNA	111	239	(204)	3254329
21	26.1	1.6	0.0	chr5	147743942	147743977	(33794282)	+	(CTCT)n	Simple_repeat	1	37	(0)	3254769
79	3.7	0.0	0.0	chr5	147743978	147744060	(33794199)	+	(CCTT)n	Simple_repeat	1	83	(0)	3254770
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
17	3.7	0.0	6.2	chr5	148826474	148826505	(32711754)	+	(GGAGG)n	Simple_repeat	1	32	(0)	3256513
264	30.5	5.6	4.8	chr5	149320921	149321044	(32217215)	C	MamRep605	LTR?	(248)	601	477	3257468
291	28.0	17.5	0.5	chr5	149344752	149344945	(32193314)	C	L2a	LINE/L2	(24)	3402	3169	3257533
204	34.7	8.3	10.9	chr5	149344959	149345307	(32192952)	+	L2b	LINE/L2	2994	3332	(43)	3257530
17	25.0	4.3	5.1	chr5	149358053	149358146	(32180113)	+	(CCG)n	Simple_repeat	1	98	(0)	3257561
839	27.7	8.2	8.8	chr5	149445709	149446074	(32092185)	C	MLT1H	LTR/ERVL-MaLR	(85)	464	83	3257748
631	27.4	17.3	2.5	chr5	149470940	149471528	(32066731)	C	L2a	LINE/L2	(0)	3426	2727	3257819
12	22.6	0.0	2.6	chr5	149730149	149730186	(31808073)	+	(CCCCCG)n	Simple_repeat	1	38	(0)	3258409
22	20.1	4.2	2.7	chr5	149730222	149730293	(31807966)	+	(CCTC)n	Simple_repeat	1	75	(0)	3258410
19	19.9	3.9	0.0	chr5	149731600	149731651	(31806608)	+	G-rich	Low_complexity	1	54	(0)	3258411
591	21.1	3.9	1.3	chr5	149732847	149732995	(31805264)	+	MIRc	SINE/MIR	8	160	(108)	3258416
593	32.2	16.5	1.6	chr5	149862044	149862476	(31675783)	+	L3	LINE/CR1	3567	4076	(23)	3258694
22	21.5	4.0	2.6	chr5	150291897	150291970	(31246289)	+	G-rich	Low_complexity	1	77	(0)	3259629
12	30.3	1.6	3.1	chr5	150293227	150293290	(31244969)	+	(TCTT)n	Simple_repeat	1	65	(0)	3259632
19	17.3	0.0	2.4	chr5	150293358	150293421	(31244838)	+	GA-rich	Low_complexity	1	62	(0)	3259633
29	18.4	3.2	5.1	chr5	150486179	150486273	(31051986)	+	G-rich	Low_complexity	1	98	(0)	3260073
208	34.8	7.8	1.4	chr5	150516204	150516346	(31021913)	+	MIRc	SINE/MIR	112	264	(4)	3260145
564	26.7	8.5	3.3	chr5	150627470	150627713	(30910546)	C	L2a	LINE/L2	(55)	3371	3114	3260390
780	21.8	1.3	1.9	chr5	150632187	150632345	(30905914)	+	MER5A1	DNA/hAT-Charlie	8	165	(1)	3260403
323	36.4	2.1	0.9	chr5	150640418	150640650	(30897609)	C	L2c	LINE/L2	(469)	2950	2715	3260423
12	12.5	0.0	3.6	chr5	150645282	150645309	(30892950)	+	G-rich	Low_complexity	1	28	(0)	3260431
465	28.2	13.4	3.8	chr5	150660535	150660770	(30877489)	+	L2b	LINE/L2	3038	3299	(76)	3260462
36	21.2	2.8	2.8	chr5	150660783	150660911	(30877348)	+	GA-rich	Low_complexity	1	129	(0)	3260463
1195	22.2	1.7	0.0	chr5	150780972	150781201	(30757058)	C	MIR	SINE/MIR	(12)	250	17	3260684
244	32.9	6.8	0.7	chr5	151081330	151081482	(30456777)	C	MIR3	SINE/MIR	(16)	192	30	3261109
13	20.2	7.3	4.1	chr5	151085909	151085976	(30452283)	+	(CCTCT)n	Simple_repeat	1	73	(0)	3261121
658	22.1	4.9	0.0	chr5	151223372	151223525	(30314734)	C	MER5A1	DNA/hAT-Charlie	(0)	166	5	3261429
13	18.5	2.6	2.5	chr5	151293743	151293781	(30244478)	+	G-rich	Low_complexity	1	40	(0)	3261597
17	0.0	4.2	0.0	chr5	151686871	151686894	(29851365)	+	(GGCA)n	Simple_repeat	1	25	(0)	3262394
20	17.9	1.6	6.2	chr5	151686990	151687053	(29851206)	+	(CTC)n	Simple_repeat	1	65	(0)	3262395
309	29.2	14.5	0.0	chr5	154542492	154542662	(26995597)	C	L3	LINE/CR1	(247)	3852	3653	3267404
436	30.2	11.0	3.2	chr5	154608759	154609299	(26928960)	+	L2a	LINE/L2	2787	3375	(0)	3267596
467	23.0	7.3	1.4	chr5	154653214	154653354	(26884905)	C	MIR	SINE/MIR	(66)	196	47	3267690
336	23.0	16.2	1.5	chr5	154784175	154784373	(26753886)	C	L2b	LINE/L2	(8)	3367	3135	3268044
228	30.8	3.7	0.0	chr5	154941330	154941407	(26596852)	C	L2b	LINE/L2	(23)	3352	3272	3268342
739	31.9	2.0	1.6	chr5	157449775	157450026	(24088233)	C	MIR	SINE/MIR	(8)	254	2	3272681
200	24.4	3.0	1.8	chr5	157948771	157948848	(23589411)	C	MIRc	SINE/MIR	(163)	105	25	3273693
3459	19.1	9.3	7.4	chr5	157951614	157951937	(23586322)	C	L1ME2z	LINE/L1	(57)	6387	6015	3273703
41	4.5	0.0	0.0	chr5	157951938	157951984	(23586275)	+	(CCCTCCCCTC)n	Simple_repeat	1	47	(0)	3273705
3459	19.1	9.3	7.4	chr5	157951985	157952001	(23586258)	C	L1ME2z	LINE/L1	(430)	6014	5998	3273703
258	19.1	0.0	0.0	chr5	157952002	157952048	(23586211)	C	MER66B	LTR/ERV1	(145)	341	295	3273706
13	17.5	7.3	3.4	chr5	158175822	158175876	(23362383)	+	GA-rich	Low_complexity	1	59	(0)	3274159
32	18.1	3.1	0.0	chr5	159100169	159100233	(22438026)	+	GA-rich	Low_complexity	1	67	(0)	3275550
1580	26.0	13.6	8.6	chr5	159179711	159180477	(22357782)	C	LTR78	LTR/ERV1	(11)	1293	483	3275664
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
12	27.0	0.0	4.1	chr5	159497327	159497375	(22040884)	+	A-rich	Low_complexity	1	49	(0)	3276220
398	31.1	3.6	10.9	chr5	159905513	159905815	(21632444)	C	L2c	LINE/L2	(0)	3387	3108	3276951
2103	12.5	0.7	0.0	chr5	159905862	159906149	(21632110)	C	AluSx	SINE/Alu	(17)	295	6	3276952
553	25.3	4.1	7.5	chr5	159908216	159908317	(21629942)	+	MIRb	SINE/MIR	67	163	(105)	3276959
1676	17.7	14.6	2.4	chr5	159908318	159908694	(21629565)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	3276960
709	28.1	6.3	2.1	chr5	159915623	159915956	(21622303)	+	L2a	LINE/L2	3078	3426	(0)	3276974
13	31.6	3.2	0.0	chr5	160119325	160119386	(21418873)	+	(CGC)n	Simple_repeat	1	64	(0)	3277395
285	22.2	2.9	4.6	chr5	160120031	160120127	(21418132)	C	L2a	LINE/L2	(8)	3418	3292	3277396
1209	22.9	12.1	12.3	chr5	160165663	160166166	(21372093)	+	MLT1K	LTR/ERVL-MaLR	4	506	(89)	3277541
12	20.9	0.0	4.8	chr5	160312606	160312647	(21225612)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	3277908
11	9.9	5.6	5.3	chr5	163437836	163437871	(18100388)	+	(GGTGCG)n	Simple_repeat	1	38	(0)	3282556
19	4.0	0.0	0.0	chr5	168579575	168579600	(12958659)	+	(GCC)n	Simple_repeat	1	26	(0)	3290342
640	23.9	22.4	0.7	chr5	168794642	168795097	(12743162)	+	L2a	LINE/L2	2844	3426	(0)	3290758
17	10.2	9.5	0.0	chr5	168859803	168859844	(12678415)	+	G-rich	Low_complexity	1	46	(0)	3290844
1857	24.5	2.2	3.4	chr5	168860469	168860974	(12677285)	+	MER74B	LTR/ERVL	56	555	(67)	3290846
12	19.1	2.1	6.2	chr5	169301281	169301327	(12236932)	+	GA-rich	Low_complexity	1	48	(0)	3291588
296	27.0	3.1	3.8	chr5	170274552	170274682	(11263577)	C	MER5A	DNA/hAT-Charlie	(3)	186	57	3293296
15	26.7	1.9	1.8	chr5	170279946	170279999	(11258260)	+	GA-rich	Low_complexity	1	55	(0)	3293307
322	27.4	1.6	4.6	chr5	170280000	170280129	(11258130)	+	MER112	DNA/hAT-Charlie	95	220	(41)	3293308
666	28.8	8.8	4.6	chr5	170520821	170521060	(11017199)	+	MIR	SINE/MIR	10	260	(2)	3293769
13	30.0	3.6	0.0	chr5	170782671	170782725	(10755534)	+	(CCCTC)n	Simple_repeat	1	57	(0)	3294287
339	29.9	10.3	3.4	chr5	171388725	171388932	(10149327)	C	MIRb	SINE/MIR	(16)	252	29	3295187
22	20.8	1.7	1.7	chr5	171976044	171976101	(9562158)	+	GA-rich	Low_complexity	1	59	(0)	3296397
29	27.4	4.1	3.3	chr5	172284162	172284320	(9253939)	+	GA-rich	Low_complexity	1	160	(0)	3297094
497	31.6	7.8	7.5	chr5	172414833	172415126	(9123133)	+	L2b	LINE/L2	3002	3296	(79)	3297377
28	17.2	4.9	5.6	chr5	172454028	172454129	(9084130)	+	G-rich	Low_complexity	1	107	(0)	3297473
280	29.1	3.4	0.2	chr5	172625371	172625508	(8912751)	+	L2a	LINE/L2	3042	3182	(193)	3297855
474	20.3	7.9	0.0	chr5	172625712	172625839	(8912420)	C	MIRb	SINE/MIR	(107)	161	23	3297856
12	22.4	0.0	2.6	chr5	172771386	172771423	(8766836)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	3298156
201	28.1	1.2	7.9	chr5	172771689	172771779	(8766480)	C	MIRc	SINE/MIR	(112)	156	68	3298157
570	28.7	9.7	1.3	chr5	172942990	172943215	(8595044)	+	MIRb	SINE/MIR	6	252	(16)	3298572
23	22.7	3.1	5.0	chr5	173056875	173056970	(8481289)	+	G-rich	Low_complexity	1	99	(0)	3298843
18	13.5	3.0	0.0	chr5	173283426	173283458	(8254801)	+	GA-rich	Low_complexity	1	34	(0)	3299339
44	2.4	0.0	0.0	chr5	173283473	173283514	(8254745)	+	(GA)n	Simple_repeat	1	42	(0)	3299340
223	31.8	4.5	0.9	chr5	173294383	173294490	(8243769)	+	MIR	SINE/MIR	32	143	(119)	3299368
13	12.7	0.0	0.0	chr5	173317503	173317528	(8220731)	+	(GCCCT)n	Simple_repeat	1	26	(0)	3299406
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
623	11.6	5.0	0.0	chr5	173614540	173614634	(7923625)	C	MER5A	DNA/hAT-Charlie	(89)	100	1	3299916
556	15.7	1.1	0.0	chr5	173614783	173614871	(7923388)	C	MER44B	DNA/TcMar-Tigger	(2)	548	459	3299917
437	17.1	4.7	1.2	chr5	173614881	173614963	(7923296)	C	MER44B	DNA/TcMar-Tigger	(220)	330	245	3299917
195	38.7	1.9	2.8	chr5	173616953	173617061	(7921198)	+	MER5A	DNA/hAT-Charlie	44	151	(38)	3299922
2956	16.0	1.4	3.4	chr5	174138084	174138665	(7399594)	C	L1MA10	LINE/L1	(7)	6327	5758	3300933
230	31.1	9.7	0.0	chr5	174150992	174151094	(7387165)	+	MIR	SINE/MIR	28	141	(121)	3300963
362	27.4	18.5	1.2	chr5	174425663	174426073	(7112186)	C	LTR33	LTR/ERVL	(0)	515	23	3301488
225	13.5	0.0	0.0	chr5	174504596	174504632	(7033627)	C	MER121	DNA/hAT?	(208)	193	157	3301610
355	27.3	1.0	0.0	chr5	175378574	175378672	(6159587)	C	X7A_LINE	LINE/CR1	(50)	217	118	3303328
345	27.2	8.1	1.8	chr5	175378722	175378912	(6159347)	+	MIRb	SINE/MIR	1	195	(35)	3303329
235	29.1	5.7	3.3	chr5	175378875	175378995	(6159264)	+	L2a	LINE/L2	3016	3139	(287)	3303330
408	32.6	8.0	0.6	chr5	175823492	175823664	(5714595)	C	L2a	LINE/L2	(954)	2465	2279	3304207
865	22.7	9.2	4.7	chr5	176200106	176200405	(5337854)	C	LOR1a	LTR/ERV1	(182)	315	1	3304810
16	5.2	0.0	0.0	chr5	176396607	176396626	(5141633)	+	(AG)n	Simple_repeat	1	20	(0)	3305163
842	25.1	8.1	2.1	chr5	176559308	176559690	(4978569)	C	HAL1	LINE/L1	(960)	1547	1140	3305531
526	14.6	5.0	0.0	chr5	176559803	176559898	(4978361)	+	MER20	DNA/hAT-Charlie	29	129	(90)	3305540
894	19.9	3.1	1.4	chr5	176559891	176560109	(4978150)	C	MER74B	LTR/ERVL	(330)	292	70	3305541
196	26.8	0.0	0.0	chr5	176610328	176610368	(4927891)	C	MIRc	SINE/MIR	(118)	150	110	3305651
450	29.1	3.2	8.5	chr5	176630697	176630861	(4907398)	+	MIRb	SINE/MIR	2	157	(111)	3305700
332	30.4	11.4	9.9	chr5	176630861	176631302	(4906957)	C	L2a	LINE/L2	(5)	3421	2973	3305701
743	26.9	17.1	4.4	chr5	176694966	176695400	(4842859)	C	MLT1J	LTR/ERVL-MaLR	(10)	502	1	3305813
235	23.3	0.0	1.6	chr5	176695440	176695500	(4842759)	C	MIRb	SINE/MIR	(93)	175	116	3305814
433	27.8	3.6	14.2	chr5	176724500	176724717	(4813542)	C	L1MC4a	LINE/L1	(2013)	5869	5676	3305869
15	14.3	0.0	3.0	chr5	176742495	176742527	(4795732)	+	(AACA)n	Simple_repeat	1	33	(0)	3305906
485	24.3	3.4	4.5	chr5	176742593	176742769	(4795490)	C	L2	LINE/L2	(340)	3079	2905	3305907
375	25.4	14.7	0.0	chr5	176762321	176762454	(4775805)	+	L1ME4b	LINE/L1	208	364	(528)	3305934
770	18.6	11.3	1.0	chr5	176762472	176762677	(4775582)	C	L1MC1	LINE/L1	(6)	6327	6098	3305935
1805	18.3	1.9	4.0	chr5	176762683	176763058	(4775201)	C	L1MC1	LINE/L1	(0)	6333	5966	3305936
403	36.4	8.6	1.6	chr5	176789421	176789733	(4748526)	C	L2a	LINE/L2	(6)	3420	3084	3305996
12	10.1	9.4	0.0	chr5	176818103	176818134	(4720125)	+	(GCCCCT)n	Simple_repeat	1	35	(0)	3306051
296	26.0	16.3	0.0	chr5	176818497	176818619	(4719640)	C	MIRb	SINE/MIR	(56)	212	66	3306053
463	35.4	4.2	3.4	chr5	176822929	176823282	(4714977)	C	L2	LINE/L2	(576)	2843	2487	3306060
84	15.2	3.9	1.6	chr5	176863706	176863884	(4674375)	+	(CTC)n	Simple_repeat	1	186	(0)	3306134
286	35.4	8.1	9.9	chr5	176901026	176901417	(4636842)	+	L2c	LINE/L2	2996	3379	(8)	3306173
265	29.3	1.9	3.1	chr5	177087437	177087561	(4450698)	C	MIRb	SINE/MIR	(127)	141	18	3306634
12	15.9	2.4	7.0	chr5	177111923	177111964	(4426295)	+	(CCTCT)n	Simple_repeat	1	43	(0)	3306688
13	22.5	3.6	3.5	chr5	177133968	177134022	(4404237)	+	G-rich	Low_complexity	1	57	(0)	3306742
827	18.7	7.4	11.9	chr5	177182349	177182436	(4355823)	+	Tigger1	DNA/TcMar-Tigger	2104	2201	(217)	3306873
505	25.7	0.0	0.0	chr5	177182438	177182542	(4355717)	C	AluJr4	SINE/Alu	(23)	289	185	3306877
19	3.9	0.0	0.0	chr5	177182594	177182620	(4355639)	+	(CCTCC)n	Simple_repeat	1	27	(0)	3306878
2323	10.8	0.0	0.3	chr5	177182632	177182937	(4355322)	C	AluSx1	SINE/Alu	(7)	305	1	3306879
234	20.0	0.0	0.0	chr5	177310093	177310163	(4228096)	C	MIR	SINE/MIR	(58)	150	79	3307154
281	30.4	2.8	8.9	chr5	177369526	177369779	(4168480)	C	L2b	LINE/L2	(209)	3217	2966	3307274
318	33.1	15.8	0.4	chr5	177381333	177381572	(4156687)	+	L2	LINE/L2	1906	2189	(1230)	3307302
38	0.0	0.0	0.0	chr5	177389347	177389381	(4148878)	+	(CCCTTC)n	Simple_repeat	1	35	(0)	3307316
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
201	20.8	3.6	0.0	chr5	177425868	177425920	(4112339)	+	MIR1_Amn	SINE/MIR	96	150	(80)	3307398
11	11.1	6.9	0.0	chr5	177425969	177425997	(4112262)	+	(GGCCGA)n	Simple_repeat	1	31	(0)	3307399
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
12	21.7	0.0	0.0	chr5	177447121	177447152	(4091107)	+	GA-rich	Low_complexity	1	32	(0)	3307435
12	13.9	0.0	0.0	chr5	177456202	177456225	(4082034)	+	(GGGA)n	Simple_repeat	1	24	(0)	3307454
189	24.5	0.0	0.0	chr5	177469462	177469511	(4068748)	+	MIRc	SINE/MIR	112	163	(67)	3307476
14	19.8	2.3	2.3	chr5	177472963	177473005	(4065254)	+	G-rich	Low_complexity	1	44	(0)	3307479
13	8.1	0.0	6.7	chr5	177473021	177473050	(4065209)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3307480
15	28.8	1.8	0.0	chr5	177491435	177491489	(4046770)	+	(AGAC)n	Simple_repeat	1	56	(0)	3307523
36	2.7	0.0	0.0	chr5	177497009	177497046	(4041213)	+	(GGGGA)n	Simple_repeat	1	38	(0)	3307529
309	27.8	7.3	0.0	chr5	177497934	177498058	(4040201)	+	MIRb	SINE/MIR	114	259	(9)	3307531
311	25.6	11.2	2.1	chr5	177554843	177554956	(3983303)	C	MIRc	SINE/MIR	(32)	236	108	3307612
12	4.3	8.3	0.0	chr5	178116186	178116209	(3422050)	+	(CTGCC)n	Simple_repeat	1	26	(0)	3308591
214	35.0	6.7	5.8	chr5	178151137	178151327	(3386932)	C	L2c	LINE/L2	(126)	3261	3069	3308658
378	29.9	3.4	2.0	chr5	178399323	178399469	(3138790)	+	MLT1K	LTR/ERVL-MaLR	400	548	(47)	3309103
5052	15.4	2.7	0.4	chr5	179059219	179060061	(2478198)	+	L1MA4A	LINE/L1	5436	6298	(5)	3310303
19	9.8	0.0	2.9	chr5	179550513	179550547	(1987712)	+	(GCCC)n	Simple_repeat	1	35	(0)	3311065
282	28.2	6.2	4.9	chr5	179610964	179611135	(1927124)	+	MIR3	SINE/MIR	61	233	(35)	3311195
18	22.7	1.7	3.3	chr5	180817091	180817150	(721109)	+	G-rich	Low_complexity	1	61	(0)	3313290
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
26571	2.2	0.3	0.1	chr5	180902522	180908537	(629722)	C	L1PA2	LINE/L1	(0)	6155	124	3313414
12	12.2	3.7	0.0	chr5	181053322	181053348	(484911)	+	(GGCGG)n	Simple_repeat	1	28	(0)	3313575
643	24.9	5.6	2.4	chr5	181104433	181104638	(433621)	+	MLT1A	LTR/ERVL-MaLR	159	371	(3)	3313650
189	36.5	1.3	0.0	chr5	181170284	181170357	(367902)	C	MIR	SINE/MIR	(63)	199	125	3313775
825	19.6	0.7	0.0	chr5	181173370	181173517	(364742)	C	AluJb	SINE/Alu	(1)	311	163	3313783
702	0.0	0.0	0.0	chr5	181173650	181173724	(364535)	+	tRNA-Val-GTG	tRNA	1	75	(1)	3313784
798	28.5	3.0	3.3	chr5	181210940	181211305	(326954)	C	L1MC4a	LINE/L1	(2018)	5864	5500	3313864
660	0.0	0.0	0.0	chr5	181222394	181222467	(315792)	C	tRNA-Val-GTG	tRNA	(2)	74	1	3313890
70	22.2	2.0	3.6	chr6	235721	235898	(170570081)	+	A-rich	Low_complexity	1	175	(0)	3314565
16	13.8	0.0	2.9	chr6	235865	235899	(170570080)	+	G-rich	Low_complexity	1	35	(0)	3314566
41	31.6	3.0	0.0	chr6	235979	236147	(170569832)	+	(TCCCTC)n	Simple_repeat	1	174	(0)	3314567
14	24.1	0.0	8.6	chr6	684159	684228	(170121751)	+	GA-rich	Low_complexity	1	70	(0)	3315100
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
195	22.0	0.0	7.4	chr6	836515	836568	(169969411)	C	L2c	LINE/L2	(46)	3341	3292	3315298
99	17.5	0.0	0.0	chr6	1027672	1027849	(169778130)	+	G-rich	Low_complexity	1	178	(0)	3315528
37	14.8	4.2	3.0	chr6	1382035	1382129	(169423850)	+	(GCGGAG)n	Simple_repeat	1	99	(0)	3316028
12	15.5	5.3	2.5	chr6	1388383	1388420	(169417559)	+	(CTCCCTC)n	Simple_repeat	1	40	(0)	3316035
113	29.3	4.4	0.7	chr6	1399077	1399510	(169406469)	+	GA-rich	Low_complexity	1	453	(0)	3316052
15	0.0	0.0	0.0	chr6	1597173	1597189	(169208790)	+	(AC)n	Simple_repeat	1	17	(0)	3316374
271	30.9	2.1	0.0	chr6	1597384	1597477	(169208502)	+	UCON80_AMi	Unknown	70	165	(57)	3316375
15	18.9	3.9	3.7	chr6	1609390	1609441	(169196538)	+	G-rich	Low_complexity	1	54	(0)	3316387
19	24.4	0.0	8.3	chr6	1614697	1614793	(169191186)	+	G-rich	Low_complexity	1	88	(0)	3316393
11	26.4	5.6	0.0	chr6	1624316	1624369	(169181610)	+	(GCCTCCC)n	Simple_repeat	1	57	(0)	3316395
378	26.9	24.2	0.8	chr6	1966966	1967354	(168838625)	+	L2a	LINE/L2	2917	3425	(1)	3316788
229	28.9	7.8	0.0	chr6	2037529	2037611	(168768368)	C	MLT1I	LTR/ERVL-MaLR	(317)	94	5	3316883
670	19.9	2.9	2.4	chr6	2232942	2233111	(168572868)	+	L1MB5	LINE/L1	5941	6111	(63)	3317143
554	32.9	10.1	4.5	chr6	2596055	2596633	(168209346)	+	ERV3-16A3_I-int	LTR/ERVL	3058	3732	(1982)	3317652
19	11.6	0.0	0.0	chr6	2765183	2765210	(168040769)	+	(C)n	Simple_repeat	1	28	(0)	3317888
2390	10.3	0.0	0.0	chr6	2799072	2799381	(168006598)	C	AluSx1	SINE/Alu	(2)	310	1	3317934
200	17.7	12.7	0.0	chr6	2799612	2799673	(168006306)	+	MIRb	SINE/MIR	4	74	(194)	3317935
26	21.6	6.3	3.4	chr6	2865262	2865268	(167940711)	+	(CTTCC)n	Simple_repeat	1	48	(70)	3318022
31	24.6	2.1	2.0	chr6	2865269	2865365	(167940614)	+	(TCCC)n	Simple_repeat	1	99	(0)	3318023
26	21.6	6.3	3.4	chr6	2865366	2865372	(167940607)	+	(CTTCC)n	Simple_repeat	49	118	(0)	3318022
1839	14.9	0.4	0.4	chr6	2865374	2865649	(167940330)	C	AluJb	SINE/Alu	(34)	278	3	3318024
318	20.8	10.6	1.9	chr6	2951887	2951989	(167853990)	+	MLT1J	LTR/ERVL-MaLR	226	338	(174)	3318153
314	23.9	3.2	1.1	chr6	2999364	2999456	(167806523)	C	L1MD2	LINE/L1	(456)	5903	5809	3318232
51	22.4	3.1	5.0	chr6	2999648	2999841	(167806138)	+	G-rich	Low_complexity	1	200	(0)	3318233
1000	24.8	5.3	0.0	chr6	3162251	3162484	(167643495)	+	MIR	SINE/MIR	15	261	(1)	3318494
28	17.7	0.0	3.2	chr6	3162495	3162557	(167643422)	+	(TCCC)n	Simple_repeat	1	63	(0)	3318495
13	14.6	0.0	3.1	chr6	3163053	3163084	(167642895)	+	(CGCGG)n	Simple_repeat	1	32	(0)	3318496
29	0.0	0.0	0.0	chr6	3163165	3163192	(167642787)	+	(CCCGC)n	Simple_repeat	1	28	(0)	3318497
365	37.9	4.7	1.3	chr6	3364214	3364440	(167441539)	C	MIRc	SINE/MIR	(17)	251	17	3318785
12	9.5	0.0	4.0	chr6	3431407	3431431	(167374548)	+	(AGGG)n	Simple_repeat	1	25	(0)	3318876
1094	21.6	9.7	3.4	chr6	3614718	3614992	(167190987)	+	AluJo	SINE/Alu	2	312	(0)	3319167
22	19.2	0.0	9.6	chr6	3614993	3615075	(167190904)	+	G-rich	Low_complexity	1	83	(0)	3319168
60	6.2	3.6	4.3	chr6	3615077	3615187	(167190792)	+	(AAGA)n	Simple_repeat	1	115	(0)	3319169
248	33.3	7.7	0.0	chr6	4323253	4323372	(166482607)	+	L1MEh	LINE/L1	197	326	(2082)	3320282
2442	25.2	12.9	4.9	chr6	4793440	4794658	(166011321)	C	L2a	LINE/L2	(421)	2998	1668	3321078
2754	2.6	0.3	0.0	chr6	5003067	5003373	(165802606)	+	AluYg6	SINE/Alu	1	308	(3)	3321335
17	9.7	2.9	2.8	chr6	5026336	5026370	(165779609)	+	G-rich	Low_complexity	1	36	(0)	3321377
1843	17.5	0.3	1.9	chr6	5832137	5832444	(164973535)	+	AluJb	SINE/Alu	2	304	(8)	3322633
85	16.3	1.8	1.2	chr6	5832445	5832611	(164973368)	+	GA-rich	Low_complexity	1	170	(0)	3322634
280	30.6	6.8	0.0	chr6	5832694	5832817	(164973162)	+	MIRb	SINE/MIR	80	212	(56)	3322635
45	13.0	1.3	0.0	chr6	6006881	6006957	(164799022)	+	(AGAG)n	Simple_repeat	1	78	(0)	3322875
19	10.8	0.0	0.0	chr6	6811688	6811718	(163994261)	+	(GAG)n	Simple_repeat	1	31	(0)	3323954
491	29.0	16.3	4.1	chr6	6906096	6906458	(163899521)	+	LTR33	LTR/ERVL	42	457	(58)	3324182
26	0.0	0.0	0.0	chr6	6906459	6906483	(163899496)	+	(T)n	Simple_repeat	1	25	(0)	3324183
18	6.9	3.0	2.9	chr6	7052592	7052624	(163753355)	+	(GGA)n	Simple_repeat	1	34	(0)	3324483
34	2.8	0.0	0.0	chr6	7107674	7107709	(163698270)	+	(CGC)n	Simple_repeat	1	36	(0)	3324624
15	14.4	0.0	0.0	chr6	7146755	7146778	(163659201)	+	(T)n	Simple_repeat	1	24	(0)	3324681
24	25.5	0.0	6.9	chr6	7296645	7296746	(163509233)	+	GA-rich	Low_complexity	1	102	(0)	3324910
211	22.6	0.0	24.3	chr6	7548883	7548993	(163256986)	C	L2b	LINE/L2	(12)	3375	3292	3325365
41	30.2	1.2	3.7	chr6	8181275	8181296	(162624683)	+	(CTCC)n	Simple_repeat	1	66	(97)	3326323
30	20.2	3.6	5.3	chr6	8181297	8181406	(162624573)	+	(TCCTTTC)n	Simple_repeat	1	114	(0)	3326324
41	30.2	1.2	3.7	chr6	8181407	8181435	(162624544)	+	(CTCC)n	Simple_repeat	67	163	(0)	3326323
35	7.0	0.0	0.0	chr6	8181440	8181485	(162624494)	+	(TTCCC)n	Simple_repeat	1	46	(0)	3326325
2292	19.1	4.7	5.8	chr6	8182261	8182826	(162623153)	C	MER89	LTR/ERV1	(0)	559	1	3326327
18	22.7	1.7	3.3	chr6	8435410	8435469	(162370510)	+	(CTC)n	Simple_repeat	1	61	(0)	3326721
1667	10.4	4.2	1.8	chr6	8934436	8934710	(161871269)	+	L1PA11	LINE/L1	5886	6167	(7)	3327411
14	26.4	5.1	0.0	chr6	10412300	10412358	(160393621)	+	A-rich	Low_complexity	1	62	(0)	3329449
54	31.0	3.2	1.8	chr6	10412302	10412397	(160393582)	+	GA-rich	Low_complexity	1	269	(0)	3329450
31	26.7	2.9	5.7	chr6	10412398	10412567	(160393412)	+	G-rich	Low_complexity	1	175	(0)	3329451
50	0.0	0.0	0.0	chr6	10423592	10423634	(160382345)	+	(TG)n	Simple_repeat	1	43	(0)	3329457
238	23.4	5.9	1.5	chr6	10521559	10521623	(160284356)	+	L2a	LINE/L2	3355	3422	(4)	3329663
1825	17.6	0.0	1.3	chr6	10723592	10723903	(160082076)	C	AluSx	SINE/Alu	(4)	308	1	3330064
1652	18.3	0.0	4.2	chr6	10748242	10748552	(160057427)	C	AluSx	SINE/Alu	(14)	298	1	3330112
29	21.6	3.2	3.1	chr6	11210713	11210766	(159595213)	+	GA-rich	Low_complexity	1	55	(0)	3330899
30	0.0	0.0	0.0	chr6	11210767	11210792	(159595187)	+	(GA)n	Simple_repeat	1	26	(0)	3330900
29	21.6	3.2	3.1	chr6	11210793	11210832	(159595147)	+	GA-rich	Low_complexity	56	94	(0)	3330901
22	20.3	2.7	4.0	chr6	12011623	12011695	(158794284)	+	G-rich	Low_complexity	1	75	(0)	3332071
14	18.5	7.0	0.0	chr6	12013074	12013116	(158792863)	+	GA-rich	Low_complexity	1	46	(0)	3332079
12	8.9	4.2	0.0	chr6	12013137	12013160	(158792819)	+	(CCT)n	Simple_repeat	1	25	(0)	3332080
562	26.1	12.7	3.5	chr6	12072179	12072352	(158733627)	C	L1MEf	LINE/L1	(4589)	1828	1650	3332163
14	18.1	6.8	0.0	chr6	12072374	12072417	(158733562)	+	(TCTCCC)n	Simple_repeat	1	47	(0)	3332165
755	27.5	13.1	4.2	chr6	12072421	12073103	(158732876)	C	L1MEf	LINE/L1	(5060)	1448	767	3332163
15	27.4	0.0	7.4	chr6	12750073	12750153	(158055826)	+	G-rich	Low_complexity	1	81	(0)	3333137
30	14.2	1.8	0.0	chr6	12887004	12887058	(157918921)	+	(CTC)n	Simple_repeat	1	56	(0)	3333362
566	28.5	6.2	1.0	chr6	13488014	13488242	(157317737)	C	MIRb	SINE/MIR	(0)	262	14	3334350
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
1320	23.2	6.2	1.3	chr6	13678416	13678795	(157127184)	+	MER74B	LTR/ERVL	139	538	(84)	3334671
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
27	25.8	1.2	1.2	chr6	14258830	14258911	(156547068)	+	G-rich	Low_complexity	1	83	(0)	3335715
12	15.8	9.5	0.0	chr6	14361048	14361089	(156444890)	+	(TCTCTCC)n	Simple_repeat	1	46	(0)	3335858
353	28.9	11.7	3.1	chr6	14361168	14361392	(156444587)	+	MIRb	SINE/MIR	22	268	(0)	3335859
511	18.4	5.9	8.2	chr6	14861410	14861616	(155944363)	C	LTR79	LTR/ERVL	(55)	472	271	3336674
2151	10.9	2.7	0.3	chr6	14861839	14862131	(155943848)	+	AluSq2	SINE/Alu	1	300	(13)	3336675
32	7.9	0.0	0.0	chr6	15327529	15327569	(155478410)	+	(GT)n	Simple_repeat	1	41	(0)	3337797
293	31.7	0.3	0.6	chr6	15386141	15386252	(155419727)	C	MIR	SINE/MIR	(156)	112	2	3337875
16	25.5	2.5	0.0	chr6	15386260	15386299	(155419680)	+	(TC)n	Simple_repeat	1	41	(0)	3337883
20	7.8	0.0	0.0	chr6	15386305	15386331	(155419648)	+	(TG)n	Simple_repeat	1	27	(0)	3337884
13	24.6	2.3	0.0	chr6	15400871	15400913	(155405066)	+	(CCTC)n	Simple_repeat	1	44	(0)	3337905
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
15	5.6	0.0	0.0	chr6	15663182	15663200	(155142779)	+	(T)n	Simple_repeat	1	19	(0)	3338220
315	23.8	5.3	8.0	chr6	15769786	15769922	(155036057)	C	L2c	LINE/L2	(1)	3386	3254	3338407
394	39.4	2.7	3.5	chr6	15769924	15770181	(155035798)	+	MIRb	SINE/MIR	5	260	(8)	3338409
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
216	21.8	5.2	6.8	chr6	16133120	16133178	(154672801)	+	MIR3	SINE/MIR	22	79	(129)	3339047
510	36.2	15.4	0.6	chr6	16277566	16277912	(154528067)	C	L2b	LINE/L2	(3)	3372	2965	3339271
443	26.0	4.9	2.4	chr6	16636167	16636323	(154169656)	C	MIR3	SINE/MIR	(15)	193	44	3339824
327	29.5	7.4	4.1	chr6	16677056	16677212	(154128767)	C	L2c	LINE/L2	(27)	3360	3176	3339898
342	30.7	5.8	5.3	chr6	16727972	16728160	(154077819)	C	MIR3	SINE/MIR	(14)	194	5	3339973
20	20.5	0.0	0.0	chr6	16759989	16760033	(154045946)	+	(CACA)n	Simple_repeat	1	45	(0)	3340012
13	8.1	3.6	3.5	chr6	16761363	16761390	(154044589)	+	(TGC)n	Simple_repeat	1	29	(0)	3340016
39	1.8	5.0	3.2	chr6	16761485	16761544	(154044435)	+	(CTC)n	Simple_repeat	1	63	(0)	3340017
495	17.5	4.7	13.0	chr6	17012679	17012869	(153793110)	+	LTR81A	LTR/Gypsy	10	188	(1205)	3340413
231	27.9	3.7	3.7	chr6	17012841	17012922	(153793057)	+	MamGypLTR2c	LTR/Gypsy	19	100	(968)	3340414
1420	29.5	8.8	6.5	chr6	17042598	17043363	(153762616)	C	L1ME1	LINE/L1	(5754)	793	9	3340458
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
247	28.3	1.1	0.0	chr6	17986695	17986786	(152819193)	+	MIR3	SINE/MIR	93	185	(23)	3342183
29	8.3	1.9	1.9	chr6	18263848	18263900	(152542079)	+	(TCC)n	Simple_repeat	1	54	(0)	3342727
18	28.7	1.1	5.3	chr6	18264204	18264298	(152541681)	+	(CGCC)n	Simple_repeat	1	90	(0)	3342728
1271	28.1	1.7	10.3	chr6	19211148	19211805	(151594174)	C	L1PA13	LINE/L1	(5901)	884	285	3344123
13	23.6	4.8	3.0	chr6	20212577	20212639	(150593340)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3345605
16	21.3	0.0	2.2	chr6	20403564	20403608	(150402371)	+	G-rich	Low_complexity	1	45	(0)	3345988
29	16.2	0.0	1.7	chr6	20497152	20497209	(150308770)	+	G-rich	Low_complexity	1	58	(0)	3346145
202	24.4	0.0	0.0	chr6	20497334	20497378	(150308601)	C	L2a	LINE/L2	(22)	3404	3360	3346146
337	24.7	2.1	0.0	chr6	21264239	21264331	(149541648)	C	MIR3	SINE/MIR	(6)	202	108	3347366
320	30.5	8.2	1.2	chr6	21265305	21265473	(149540506)	C	MIR	SINE/MIR	(20)	242	61	3347367
15	12.0	0.0	0.0	chr6	21596241	21596267	(149209712)	+	(TTG)n	Simple_repeat	1	27	(0)	3347919
13	28.4	3.0	2.9	chr6	21665926	21665992	(149139987)	+	GA-rich	Low_complexity	1	69	(0)	3348061
12	12.5	0.0	3.6	chr6	21741354	21741381	(149064598)	+	G-rich	Low_complexity	1	28	(0)	3348211
315	25.2	8.3	1.0	chr6	21965450	21965549	(148840430)	C	MIR	SINE/MIR	(14)	248	141	3348632
2340	13.3	0.0	0.0	chr6	21965550	21965858	(148840121)	C	AluSx	SINE/Alu	(3)	309	1	3348633
990	28.7	10.8	1.6	chr6	22008414	22008966	(148797013)	+	Charlie29a	DNA/hAT-Charlie	51	660	(59)	3348708
4118	14.4	0.5	0.1	chr6	24237405	24238077	(146567902)	+	L1PA16	LINE/L1	5477	6151	(15)	3351581
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
1754	18.1	6.3	7.3	chr6	24763371	24763577	(146042402)	+	MER97b	DNA/hAT-Tip100	835	1049	(0)	3352508
288	36.3	10.0	0.8	chr6	24763767	24763964	(146042015)	+	L2b	LINE/L2	1868	2086	(1333)	3352510
13	12.7	2.6	5.1	chr6	25279351	25279388	(145526591)	+	(CCCCG)n	Simple_repeat	1	39	(0)	3353384
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
239	23.8	3.4	6.7	chr6	26342201	26342290	(144463689)	C	MIRc	SINE/MIR	(17)	251	165	3355063
22	6.3	0.0	2.9	chr6	26383859	26383893	(144422086)	+	(CCT)n	Simple_repeat	1	35	(0)	3355154
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
644	2.7	0.0	0.0	chr6	27275210	27275284	(143530695)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356626
259	29.4	10.4	6.4	chr6	27388386	27388541	(143417438)	+	MER5A	DNA/hAT-Charlie	27	189	(0)	3356814
88	30.1	2.2	2.4	chr6	27500145	27500466	(143305513)	+	A-rich	Low_complexity	1	329	(0)	3357000
765	17.9	2.5	8.2	chr6	27500480	27500649	(143305330)	+	AluJb	SINE/Alu	136	295	(17)	3356999
678	1.4	0.0	0.0	chr6	27547752	27547823	(143258156)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3357094
31	0.0	0.0	0.0	chr6	27651559	27651585	(143154394)	+	(GT)n	Simple_repeat	1	27	(0)	3357301
1009	24.6	16.1	4.0	chr6	27672796	27673090	(143132889)	+	L2	LINE/L2	1073	1426	(1993)	3357342
2085	9.2	0.7	3.3	chr6	27673091	27673393	(143132586)	+	AluSx	SINE/Alu	2	296	(16)	3357343
13	18.4	0.0	0.0	chr6	27721443	27721473	(143084506)	+	GA-rich	Low_complexity	1	31	(0)	3357460
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
13	0.0	0.0	0.0	chr6	27754388	27754404	(143051575)	+	(AAT)n	Simple_repeat	1	17	(0)	3357537
4484	7.9	2.5	0.0	chr6	27792718	27793312	(143012667)	C	LTR71B	LTR/ERV1	(0)	610	1	3357601
15	13.4	3.0	0.0	chr6	28489545	28489577	(142316402)	+	GA-rich	Low_complexity	1	34	(0)	3358714
23	13.0	0.0	0.0	chr6	28489717	28489751	(142316228)	+	(T)n	Simple_repeat	1	35	(0)	3358715
182	25.0	0.0	0.0	chr6	33742847	33742902	(137063077)	C	L2c	LINE/L2	(217)	3170	3115	3367059
11	21.1	2.5	2.4	chr6	33743045	33743084	(137062895)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	3367060
13	16.9	3.0	0.0	chr6	33744870	33744902	(137061077)	+	G-rich	Low_complexity	1	34	(0)	3367063
498	35.4	2.2	2.7	chr6	33775715	33775900	(137030079)	+	MIR	SINE/MIR	76	260	(2)	3367122
593	22.0	5.1	1.3	chr6	33929922	33930073	(136875906)	C	L1M5	LINE/L1	(479)	5700	5543	3367316
373	24.6	1.8	5.2	chr6	33930075	33930190	(136875789)	C	L2b	LINE/L2	(236)	3139	3028	3367317
2341	10.4	0.3	0.3	chr6	33930253	33930559	(136875420)	C	AluSq	SINE/Alu	(6)	307	1	3367318
204	33.6	1.4	2.8	chr6	33974640	33974780	(136831199)	+	L2b	LINE/L2	2948	3086	(289)	3367384
303	27.8	15.8	1.5	chr6	34046388	34046657	(136759322)	C	LTR16E1	LTR/ERVL	(0)	538	223	3367532
17	16.8	2.5	0.0	chr6	34462555	34462594	(136343385)	+	(TCTCCCC)n	Simple_repeat	1	41	(0)	3368458
333	28.9	6.3	2.8	chr6	34575287	34575488	(136230491)	+	L2b	LINE/L2	3175	3381	(45)	3368692
332	27.7	6.7	0.9	chr6	34675320	34675432	(136130547)	+	L1ME4a	LINE/L1	4826	4945	(1201)	3368882
12	13.7	0.0	0.0	chr6	34696759	34696782	(136109197)	+	(ACTC)n	Simple_repeat	1	24	(0)	3368935
17	39.7	0.0	0.0	chr6	34696784	34696874	(136109105)	+	(CCC)n	Simple_repeat	1	91	(0)	3368936
17	23.0	8.2	0.0	chr6	35017307	35017373	(135788606)	+	(CT)n	Simple_repeat	1	72	(0)	3369616
59	21.5	0.7	3.3	chr6	35213818	35213969	(135592010)	+	GA-rich	Low_complexity	1	153	(0)	3369926
434	23.6	5.2	1.8	chr6	35302870	35302981	(135502998)	+	MIRb	SINE/MIR	94	209	(59)	3370077
12	13.9	0.0	0.0	chr6	35491233	35491256	(135314723)	+	(CAGA)n	Simple_repeat	1	24	(0)	3370483
14	17.1	0.0	6.7	chr6	35491260	35491304	(135314675)	+	GA-rich	Low_complexity	1	45	(0)	3370484
14	25.5	1.8	3.5	chr6	35491417	35491472	(135314507)	+	A-rich	Low_complexity	1	57	(0)	3370485
12	15.3	3.5	0.0	chr6	35494456	35494484	(135311495)	+	G-rich	Low_complexity	1	30	(0)	3370487
181	9.4	0.0	11.1	chr6	35726433	35726468	(135079511)	+	MIRb	SINE/MIR	188	219	(49)	3371012
54	0.0	0.0	0.0	chr6	35726537	35726582	(135079397)	+	(CA)n	Simple_repeat	1	46	(0)	3371013
13	14.5	3.2	0.0	chr6	35731388	35731418	(135074561)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	3371021
13	31.6	0.0	0.0	chr6	35731963	35732013	(135073966)	+	G-rich	Low_complexity	1	51	(0)	3371023
504	17.6	0.0	1.0	chr6	35863517	35863619	(134942360)	+	L1MA2	LINE/L1	2881	2982	(4584)	3371325
1457	8.8	4.0	4.4	chr6	35863683	35863955	(134942024)	+	L1MA2	LINE/L1	2933	3204	(4361)	3371325
21	11.4	6.1	1.9	chr6	36124030	36124078	(134681901)	+	GA-rich	Low_complexity	1	52	(0)	3371839
23	23.9	0.0	1.5	chr6	36124085	36124118	(134681861)	+	(TTTC)n	Simple_repeat	1	33	(0)	3371840
12	14.4	0.0	0.0	chr6	36196746	36196769	(134609210)	+	(GGC)n	Simple_repeat	1	24	(0)	3371983
16	34.1	1.2	1.2	chr6	36196789	36196870	(134609109)	+	G-rich	Low_complexity	1	83	(0)	3371984
12	21.0	2.4	2.4	chr6	36297795	36297835	(134508144)	+	(CCTCTCC)n	Simple_repeat	1	42	(0)	3372191
1743	19.9	5.6	10.1	chr6	36297876	36298400	(134507579)	C	L1ME1	LINE/L1	(82)	6097	5598	3372192
299	33.2	11.0	2.3	chr6	36341173	36341309	(134464670)	C	MIRb	SINE/MIR	(13)	255	106	3372285
615	18.8	6.2	2.9	chr6	36547650	36547819	(134258160)	C	L1MC4a	LINE/L1	(0)	7882	7707	3372734
276	27.1	4.0	6.8	chr6	36590549	36590651	(134215328)	C	MLT1K	LTR/ERVL-MaLR	(431)	164	65	3372873
190	27.8	0.0	1.8	chr6	36677062	36677116	(134128863)	C	MamRTE1	LINE/RTE-BovB	(2399)	1413	1360	3373073
12	23.8	0.0	6.0	chr6	36765177	36765226	(134040753)	+	(CCCCAC)n	Simple_repeat	1	50	(0)	3373240
753	27.0	8.3	1.3	chr6	36780765	36781000	(134024979)	C	MIRb	SINE/MIR	(14)	254	1	3373271
1085	25.5	13.0	5.5	chr6	36820967	36821458	(133984521)	C	L2a	LINE/L2	(162)	3264	2756	3373363
19	20.2	2.9	4.3	chr6	36839487	36839554	(133966425)	+	G-rich	Low_complexity	1	70	(0)	3373405
14	7.1	6.2	2.9	chr6	36960626	36960657	(133845322)	+	(CCCT)n	Simple_repeat	1	34	(0)	3373650
616	26.3	6.5	1.1	chr6	37001446	37001633	(133804346)	C	MIR	SINE/MIR	(5)	257	59	3373702
590	26.7	17.6	2.6	chr6	37001736	37002039	(133803940)	C	MLT2F	LTR/ERVL	(55)	608	250	3373703
309	22.7	19.2	0.0	chr6	37125787	37125883	(133680096)	C	MIR3	SINE/MIR	(54)	154	35	3374020
23	24.5	3.5	2.3	chr6	37170158	37170242	(133635737)	+	(GGC)n	Simple_repeat	1	88	(0)	3374136
32	0.0	0.0	0.0	chr6	37170248	37170277	(133635702)	+	(GCA)n	Simple_repeat	1	30	(0)	3374137
310	33.0	1.0	1.0	chr6	37488366	37488466	(133317513)	+	Tigger19a	DNA/TcMar-Tigger	1	101	(222)	3374748
18	15.0	0.0	7.7	chr6	37697920	37697971	(133108008)	+	(CTC)n	Simple_repeat	1	52	(0)	3375151
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
17	16.3	5.6	0.0	chr6	38290151	38290186	(132515793)	+	GA-rich	Low_complexity	1	38	(0)	3376148
1255	31.9	14.4	3.2	chr6	38503402	38504548	(132301431)	+	L2a	LINE/L2	439	1735	(1684)	3376492
4362	10.2	6.7	0.3	chr6	38797285	38797960	(132008019)	+	LTR30	LTR/ERV1	1	722	(0)	3377001
2454	8.2	0.3	0.0	chr6	38984511	38984814	(131821165)	+	AluSx4	SINE/Alu	1	305	(5)	3377305
22	32.4	4.0	0.0	chr6	39037339	39037437	(131768542)	+	(CT)n	Simple_repeat	1	103	(0)	3377369
435	23.0	18.2	0.0	chr6	39057152	39057299	(131748680)	C	MIR	SINE/MIR	(14)	248	68	3377396
200	26.3	0.0	0.0	chr6	39057333	39057370	(131748609)	+	MIR	SINE/MIR	218	255	(7)	3377395
819	28.5	8.1	2.9	chr6	39060318	39060762	(131745217)	C	LTR33	LTR/ERVL	(4)	511	42	3377402
215	23.9	24.0	4.3	chr6	39219318	39219479	(131586500)	C	MIRb	SINE/MIR	(20)	248	45	3377670
13	23.3	0.0	2.4	chr6	39725496	39725537	(131080442)	+	G-rich	Low_complexity	1	42	(0)	3378438
187	27.9	14.1	4.7	chr6	39932360	39932487	(130873492)	C	MIR3	SINE/MIR	(50)	158	17	3378780
31	8.1	0.0	0.0	chr6	40585837	40585876	(130220103)	+	(AC)n	Simple_repeat	1	40	(0)	3379729
17	15.8	2.1	4.2	chr6	40589072	40589118	(130216861)	+	G-rich	Low_complexity	1	48	(0)	3379735
188	25.0	1.9	0.0	chr6	40796992	40797043	(130008936)	+	L3b	LINE/CR1	5175	5227	(5)	3380117
15	12.7	0.0	5.3	chr6	41073547	41073584	(129732395)	+	(CTCCCCG)n	Simple_repeat	1	38	(0)	3380582
13	15.9	0.0	9.8	chr6	41073761	41073811	(129732168)	+	(CGCC)n	Simple_repeat	1	51	(0)	3380583
3920	13.4	3.1	0.6	chr6	41278830	41279451	(129526528)	+	MER51C	LTR/ERV1	1	638	(2)	3380882
418	25.6	6.8	4.7	chr6	41424902	41425073	(129380906)	C	MIRc	SINE/MIR	(61)	207	32	3381130
20	21.2	2.8	4.1	chr6	41443482	41443552	(129362427)	+	G-rich	Low_complexity	1	73	(0)	3381167
29	20.4	1.2	3.7	chr6	41456713	41456793	(129349186)	+	(CTCC)n	Simple_repeat	1	82	(0)	3381196
22	27.9	3.1	2.0	chr6	41488815	41488912	(129317067)	+	GA-rich	Low_complexity	1	101	(0)	3381255
28	29.3	1.1	2.1	chr6	41489371	41489465	(129316514)	+	(CA)n	Simple_repeat	1	96	(0)	3381256
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
371	25.6	3.1	3.1	chr6	41556129	41556257	(129249722)	+	MIRc	SINE/MIR	20	148	(120)	3381387
2455	7.1	0.0	0.3	chr6	41556326	41556622	(129249357)	C	AluY	SINE/Alu	(14)	297	2	3381388
414	34.3	5.8	8.0	chr6	41575267	41575402	(129230577)	+	L2c	LINE/L2	3249	3369	(18)	3381416
17	12.7	0.0	0.0	chr6	41591993	41592018	(129213961)	+	(GT)n	Simple_repeat	1	26	(0)	3381441
1501	27.0	7.0	3.3	chr6	41696719	41697102	(129108877)	+	L1ME3A	LINE/L1	5781	6169	(4)	3381634
13	11.6	0.0	6.2	chr6	41734758	41734789	(129071190)	+	GA-rich	Low_complexity	1	32	(0)	3381714
13	18.4	5.7	3.6	chr6	41780087	41780139	(129025840)	+	(GCGCGGAG)n	Simple_repeat	1	56	(0)	3381804
12	21.8	2.7	0.0	chr6	41780265	41780301	(129025678)	+	G-rich	Low_complexity	1	38	(0)	3381805
17	8.6	8.1	0.0	chr6	41941725	41941761	(128864218)	+	(GGCGCT)n	Simple_repeat	1	40	(0)	3382130
15	10.4	3.0	2.9	chr6	41941767	41941799	(128864180)	+	(CCCG)n	Simple_repeat	1	34	(0)	3382131
15	3.6	0.0	11.1	chr6	42010424	42010459	(128795520)	+	(GGGA)n	Simple_repeat	1	36	(0)	3382324
662	22.1	0.0	2.1	chr6	42116230	42116372	(128689607)	C	MIR	SINE/MIR	(47)	215	76	3382566
210	32.3	13.3	3.3	chr6	42116437	42116766	(128689213)	+	L2c	LINE/L2	2643	3010	(409)	3382567
351	24.3	5.3	0.0	chr6	42136878	42136984	(128668995)	+	MER5A1	DNA/hAT-Charlie	46	158	(8)	3382616
14	13.4	6.1	0.0	chr6	42451476	42451508	(128354471)	+	(CAC)n	Simple_repeat	1	35	(0)	3383276
15	13.7	0.0	2.9	chr6	42451626	42451659	(128354320)	+	(CCCCTC)n	Simple_repeat	1	34	(0)	3383277
12	43.1	0.0	0.0	chr6	42452222	42452296	(128353683)	+	G-rich	Low_complexity	1	75	(0)	3383278
19	14.0	0.0	2.4	chr6	42453070	42453110	(128352869)	+	G-rich	Low_complexity	1	41	(0)	3383279
13	20.6	2.6	0.0	chr6	42454061	42454099	(128351880)	+	(TGTCCTC)n	Simple_repeat	1	40	(0)	3383280
15	15.8	0.0	5.1	chr6	42746494	42746532	(128059447)	+	(GTGG)n	Simple_repeat	1	39	(0)	3383927
12	26.2	1.7	4.9	chr6	42746533	42746547	(128059432)	+	G-rich	Low_complexity	15	61	(0)	3383928
20	25.6	2.6	2.5	chr6	42782747	42782824	(128023155)	+	G-rich	Low_complexity	1	80	(0)	3384025
616	23.1	3.6	0.0	chr6	42985318	42985477	(127820502)	C	MIR3	SINE/MIR	(5)	203	38	3384479
244	24.4	7.9	2.4	chr6	43013389	43013472	(127792507)	C	LTR50	LTR/ERVL	(552)	243	155	3384534
13	11.7	3.6	0.0	chr6	43021024	43021051	(127784928)	+	G-rich	Low_complexity	1	29	(0)	3384538
245	35.8	0.0	2.1	chr6	43054011	43054107	(127751872)	C	MIR3	SINE/MIR	(17)	191	97	3384600
19	18.9	0.0	0.0	chr6	43070084	43070119	(127735860)	+	A-rich	Low_complexity	1	36	(0)	3384633
239	18.0	3.8	2.0	chr6	43070120	43070170	(127735809)	C	MER20B	DNA/hAT-Charlie	(716)	67	16	3384634
266	27.3	6.8	9.2	chr6	43130000	43130160	(127675819)	+	MIR3	SINE/MIR	9	170	(60)	3384756
15	11.2	7.3	2.3	chr6	43181080	43181120	(127624859)	+	(TCAC)n	Simple_repeat	1	44	(0)	3384871
15	18.1	3.1	0.0	chr6	43247644	43247675	(127558304)	+	(GT)n	Simple_repeat	1	33	(0)	3385001
15	0.0	7.1	3.3	chr6	43307434	43307461	(127498518)	+	(GAAA)n	Simple_repeat	1	30	(0)	3385101
1663	21.9	12.8	5.4	chr6	43389934	43390521	(127415458)	+	MER21C	LTR/ERVL	263	893	(45)	3385254
1911	15.0	0.3	0.3	chr6	43670320	43670619	(127135360)	+	AluJo	SINE/Alu	1	300	(12)	3385800
232	24.1	4.6	0.0	chr6	43708973	43709039	(127096940)	+	L2b	LINE/L2	3315	3387	(0)	3385872
681	15.7	1.5	0.7	chr6	43709213	43709347	(127096632)	C	L1MB8	LINE/L1	(1)	6177	6042	3385873
261	36.9	5.4	1.7	chr6	43725772	43725950	(127080029)	+	MIRb	SINE/MIR	3	188	(80)	3385906
15	24.6	0.0	5.2	chr6	43770925	43770982	(127034997)	+	(AGCCG)n	Simple_repeat	1	58	(0)	3385989
23	22.1	1.7	0.0	chr6	43770967	43771024	(127034955)	+	GA-rich	Low_complexity	1	59	(0)	3385990
324	24.8	7.4	0.4	chr6	43809507	43809617	(126996362)	+	L2b	LINE/L2	3258	3387	(0)	3386049
735	26.8	7.8	2.1	chr6	43809746	43809985	(126995994)	+	MIR	SINE/MIR	8	262	(0)	3386050
185	26.9	8.2	2.9	chr6	43917320	43917388	(126888591)	C	MIRc	SINE/MIR	(172)	96	24	3386246
251	34.0	11.9	1.2	chr6	43917534	43917697	(126888282)	+	MamSINE1	SINE/tRNA-RTE	15	198	(92)	3386247
85	20.8	4.3	0.0	chr6	44009527	44009734	(126796245)	+	GA-rich	Low_complexity	1	217	(0)	3386407
273	36.5	9.2	1.2	chr6	44009738	44009995	(126795984)	+	L3	LINE/CR1	3736	4016	(83)	3386405
43	0.0	0.0	0.0	chr6	44042396	44042435	(126763544)	+	(GAGGG)n	Simple_repeat	1	40	(0)	3386469
266	34.9	2.9	0.0	chr6	44068723	44068854	(126737125)	C	X7A_LINE	LINE/CR1	(36)	231	96	3386506
993	29.1	9.9	2.0	chr6	44070348	44070949	(126735030)	C	L1ME4b	LINE/L1	(297)	595	3	3386512
19	6.5	3.1	0.0	chr6	44073528	44073559	(126732420)	+	(GGGAGG)n	Simple_repeat	1	33	(0)	3386517
20	6.5	0.0	2.9	chr6	44223992	44224025	(126581954)	+	(TGGGGA)n	Simple_repeat	1	34	(0)	3386814
19	0.0	0.0	0.0	chr6	44257013	44257033	(126548946)	+	(CT)n	Simple_repeat	1	21	(0)	3386858
17	11.7	2.6	2.5	chr6	44297771	44297810	(126508169)	+	(CGCTGC)n	Simple_repeat	1	40	(0)	3386924
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
2999	19.0	9.4	4.1	chr6	45415153	45415876	(125390103)	C	LTR41	LTR/ERVL	(2)	766	1	3388610
3815	21.0	3.0	4.0	chr6	45612290	45613644	(125192335)	C	L1ME1	LINE/L1	(14)	6165	4824	3388876
151	19.3	2.6	3.3	chr6	45642819	45643206	(125162773)	+	(TCTCC)n	Simple_repeat	1	398	(0)	3388932
87	22.9	4.0	0.4	chr6	45817210	45817437	(124988542)	+	GA-rich	Low_complexity	1	237	(0)	3389212
14	21.9	1.5	7.3	chr6	46015901	46015967	(124790012)	+	(GCCGG)n	Simple_repeat	1	68	(0)	3389568
101	4.6	0.0	3.4	chr6	46016089	46016234	(124789745)	+	(AGGGGA)n	Simple_repeat	1	146	(0)	3389569
6752	15.5	3.7	2.5	chr6	47126067	47127346	(123678633)	C	L1MCa	LINE/L1	(5201)	1307	1	3391269
1939	14.5	1.1	0.7	chr6	47151691	47151973	(123654006)	+	AluJb	SINE/Alu	1	284	(28)	3391318
31	9.2	0.0	0.0	chr6	47151978	47152024	(123653955)	+	(AGGGG)n	Simple_repeat	1	47	(0)	3391319
896	15.4	0.0	0.0	chr6	47152187	47152309	(123653670)	+	AluJo	SINE/Alu	1	123	(189)	3391320
586	25.9	11.6	7.4	chr6	52550144	52550455	(118255524)	+	LTR33	LTR/ERVL	186	512	(3)	3398702
743	29.2	11.9	5.2	chr6	53588602	53589023	(117216956)	+	LTR16E2	LTR/ERVL	104	557	(11)	3400405
944	34.1	10.2	1.5	chr6	53589050	53589799	(117216180)	C	L2	LINE/L2	(830)	2589	1767	3400406
2352	10.2	0.0	0.0	chr6	53800647	53800939	(117005040)	C	AluSz	SINE/Alu	(19)	293	1	3400751
1051	27.0	9.2	6.9	chr6	53800940	53801545	(117004434)	+	Charlie29a	DNA/hAT-Charlie	93	716	(3)	3400750
1294	27.9	14.7	5.4	chr6	53942793	53943876	(116862103)	+	LTR78	LTR/ERV1	90	1291	(13)	3400956
14	21.3	5.0	6.0	chr6	54875666	54875745	(115930234)	+	(AGGTGGA)n	Simple_repeat	1	84	(0)	3402237
3908	11.2	5.1	7.5	chr6	55108229	55108988	(115696991)	+	L1PB1	LINE/L1	1	741	(6122)	3402521
1134	17.3	3.2	0.5	chr6	56657541	56657755	(114148224)	+	L1MB3	LINE/L1	5955	6175	(8)	3404400
1224	24.7	9.5	0.8	chr6	57038649	57039040	(113766939)	+	L1MEc	LINE/L1	34	463	(5937)	3405041
423	16.7	1.3	0.0	chr6	57039239	57039316	(113766663)	+	MER68-int	LTR/ERVL	3802	3880	(1650)	3405042
1626	16.6	11.6	1.4	chr6	63487135	63487269	(107318710)	C	AluJb	SINE/Alu	(144)	168	1	3410620
570	28.3	9.7	7.0	chr6	63487270	63487335	(107318644)	C	LTR75B	LTR/ERVL	(339)	180	122	3410619
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
4083	22.8	3.6	12.8	chr6	72669016	72670528	(98135451)	C	MLT1A-int	LTR/ERVL-MaLR	(1)	1370	1	3422159
13	23.9	0.0	4.2	chr6	75206501	75206548	(95599431)	+	(ATCTCC)n	Simple_repeat	1	48	(0)	3425882
417	27.2	22.7	0.0	chr6	75413951	75414134	(95391845)	+	MIRc	SINE/MIR	10	247	(21)	3426176
460	31.9	4.7	2.1	chr6	75811860	75812003	(94993976)	C	MIRb	SINE/MIR	(68)	200	53	3426879
5074	8.9	1.9	0.0	chr6	75849517	75850224	(94955755)	C	LTR30	LTR/ERV1	(0)	722	1	3426938
1830	14.6	4.7	0.6	chr6	77368942	77369265	(93436714)	C	LTR1A2	LTR/ERV1	(499)	338	1	3428725
924	23.5	12.4	6.0	chr6	77369266	77369768	(93436211)	+	L1ME4b	LINE/L1	311	850	(42)	3428724
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
34	26.0	5.3	1.4	chr6	81754995	81755145	(89050834)	+	GA-rich	Low_complexity	1	156	(0)	3434194
53	3.8	0.0	0.0	chr6	82144933	82144986	(88660993)	+	(AC)n	Simple_repeat	1	54	(0)	3434687
2206	13.4	0.0	0.0	chr6	82259918	82260216	(88545763)	+	AluSx1	SINE/Alu	1	299	(13)	3434902
31	23.0	0.9	4.7	chr6	83067992	83068096	(87737883)	+	G-rich	Low_complexity	1	106	(0)	3436015
27	22.1	3.4	5.7	chr6	83512384	83512501	(87293478)	+	(CTCTCC)n	Simple_repeat	1	122	(0)	3436642
12	15.8	0.0	3.3	chr6	83859587	83859616	(86946363)	+	(CTCC)n	Simple_repeat	1	30	(0)	3437073
2131	15.4	6.9	3.6	chr6	83877349	83877765	(86928214)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3437110
392	33.3	0.8	0.0	chr6	85460272	85460397	(85345582)	C	MER117	DNA/hAT-Charlie	(67)	130	4	3439092
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
788	27.2	2.4	1.5	chr6	85670575	85670779	(85135200)	+	Charlie13a	DNA/hAT-Charlie	898	1104	(410)	3439417
27	27.1	0.0	2.5	chr6	85670780	85670867	(85135112)	+	(CTCC)n	Simple_repeat	1	85	(0)	3439418
513	24.5	20.7	1.5	chr6	87079021	87079285	(83726694)	C	Charlie17b	DNA/hAT-Charlie	(616)	588	260	3441021
39879	5.4	2.1	0.4	chr6	88725122	88730135	(82075844)	+	HERVIP10FH-int	LTR/ERV1	1	5102	(0)	3443484
290	12.2	3.9	0.0	chr6	88972588	88972602	(81833377)	C	AluYk11	SINE/Alu	(259)	52	36	3443865
1966	16.8	0.9	0.6	chr6	88972603	88972938	(81833041)	+	MER61A	LTR/ERV1	5	341	(0)	3443866
16	18.6	1.6	7.7	chr6	89080343	89080406	(81725573)	+	(TCCCCC)n	Simple_repeat	1	65	(0)	3444133
19	21.7	0.0	0.0	chr6	89081515	89081552	(81724427)	+	G-rich	Low_complexity	1	38	(0)	3444135
351	32.9	6.1	0.7	chr6	89311754	89311936	(81494043)	C	MIRb	SINE/MIR	(70)	198	4	3444547
13	23.5	0.0	0.0	chr6	89412325	89412359	(81393620)	+	(CGCG)n	Simple_repeat	1	35	(0)	3444715
225	28.6	8.4	3.0	chr6	90186551	90186651	(80619328)	C	Helitron2Na_Mam	RC?/Helitron?	(206)	118	12	3446010
675	28.0	5.5	2.6	chr6	90186699	90186929	(80619050)	C	MIRb	SINE/MIR	(11)	257	20	3446011
20	11.6	0.0	0.0	chr6	90218492	90218526	(80587453)	+	(T)n	Simple_repeat	1	35	(0)	3446049
237	28.7	8.7	2.1	chr6	90287060	90287155	(80518824)	C	Tigger16a	DNA/TcMar-Tigger	(777)	180	78	3446156
728	25.6	4.1	4.7	chr6	90496286	90496630	(80309349)	C	MER39	LTR/ERV1	(199)	508	1	3446495
397	22.6	3.8	0.0	chr6	90496631	90496732	(80309247)	+	MIR	SINE/MIR	123	228	(34)	3446494
13170	16.5	1.7	3.9	chr6	95201265	95203679	(75602300)	C	Tigger1	DNA/TcMar-Tigger	(52)	2366	1	3452187
15	17.6	0.0	4.8	chr6	95577454	95577495	(75228484)	+	(GCCCC)n	Simple_repeat	1	42	(0)	3452635
334	23.7	8.2	1.5	chr6	96898100	96898236	(73907743)	C	MER5B	DNA/hAT-Charlie	(28)	150	4	3454286
32	27.8	3.2	2.2	chr6	98834564	98834680	(71971299)	+	GA-rich	Low_complexity	1	118	(0)	3456774
13	23.7	6.6	1.5	chr6	98845227	98845287	(71960692)	+	(CCGC)n	Simple_repeat	1	65	(0)	3456781
12	8.0	7.4	0.0	chr6	98845843	98845869	(71960110)	+	(TCCTT)n	Simple_repeat	1	29	(0)	3456782
11	10.6	0.0	10.5	chr6	104941037	104941074	(65864905)	+	G-rich	Low_complexity	1	38	(0)	3464694
12	23.6	2.0	4.0	chr6	104954453	104954501	(65851478)	+	(CTTT)n	Simple_repeat	1	50	(0)	3464702
13	22.0	5.4	7.1	chr6	104954502	104954541	(65851438)	+	(TCTCT)n	Simple_repeat	5	98	(0)	3464703
15	8.5	0.0	0.0	chr6	105018706	105018730	(65787249)	+	(TTCC)n	Simple_repeat	1	25	(0)	3464816
2057	13.8	1.0	0.3	chr6	105037521	105037810	(65768169)	C	AluSz6	SINE/Alu	(20)	292	1	3464840
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
13	10.7	3.1	3.0	chr6	106273573	106273604	(64532375)	+	G-rich	Low_complexity	1	33	(0)	3466638
200	29.8	3.5	3.5	chr6	106273617	106273703	(64532276)	C	MIRb	SINE/MIR	(132)	136	50	3466639
12	17.9	3.1	0.0	chr6	107116056	107116087	(63689892)	+	(CACA)n	Simple_repeat	1	33	(0)	3468220
13	25.0	0.0	0.0	chr6	107116239	107116276	(63689703)	+	G-rich	Low_complexity	1	38	(0)	3468221
19	28.9	2.3	2.2	chr6	107489989	107490075	(63315904)	+	(CCTCC)n	Simple_repeat	1	89	(0)	3468954
232	26.7	13.9	3.4	chr6	107498077	107498194	(63307785)	C	L2a	LINE/L2	(9)	3417	3263	3468964
11	17.3	7.7	0.0	chr6	107498853	107498891	(63307088)	+	GA-rich	Low_complexity	1	42	(0)	3468965
585	31.2	8.5	2.2	chr6	107604853	107605127	(63200852)	C	LTR85b	LTR/Gypsy?	(299)	485	192	3469103
1068	14.6	1.2	0.0	chr6	107657697	107657854	(63148125)	+	AluSx	SINE/Alu	137	296	(16)	3469172
1504	23.6	16.0	5.0	chr6	107998873	107999375	(62806604)	+	LTR102_Mam	LTR/ERVL	263	825	(26)	3469758
14	28.4	1.8	0.0	chr6	108558401	108558455	(62247524)	+	G-rich	Low_complexity	1	56	(0)	3470834
15	17.6	0.0	4.8	chr6	108837453	108837494	(61968485)	+	G-rich	Low_complexity	1	42	(0)	3471229
23	29.0	4.3	2.5	chr6	108837495	108837566	(61968413)	+	GA-rich	Low_complexity	3	121	(0)	3471230
294	28.2	14.1	0.9	chr6	108893347	108893457	(61912522)	+	MIRc	SINE/MIR	14	141	(127)	3471321
86	20.7	1.0	7.4	chr6	109483316	109483543	(61322436)	+	(GGCGG)n	Simple_repeat	1	212	(0)	3472231
2278	12.6	12.7	12.7	chr6	110952319	110952837	(59853142)	+	LTR44	LTR/ERV1	1	519	(0)	3474702
662	25.1	6.9	0.5	chr6	111057406	111057609	(59748370)	+	L1ME4b	LINE/L1	592	809	(83)	3474945
628	16.7	0.0	3.6	chr6	111057643	111057754	(59748225)	+	MER2B	DNA/TcMar-Tigger	229	336	(0)	3474946
487	24.6	2.3	5.7	chr6	111114372	111114548	(59691431)	C	MER104	DNA/TcMar-Tc2	(0)	181	11	3475059
12	24.0	2.6	0.0	chr6	111114552	111114590	(59691389)	+	A-rich	Low_complexity	1	40	(0)	3475060
457	24.3	9.3	1.1	chr6	111114595	111114781	(59691198)	+	L1ME3Cz	LINE/L1	706	909	(88)	3475058
12	9.1	4.2	0.0	chr6	111552635	111552658	(59253321)	+	(CTCC)n	Simple_repeat	1	25	(0)	3475817
12	16.9	2.9	2.8	chr6	111873420	111873454	(58932525)	+	(GCT)n	Simple_repeat	1	36	(0)	3476294
17	25.1	0.0	7.4	chr6	113855186	113855266	(56950713)	+	(CCCCTC)n	Simple_repeat	1	81	(0)	3479246
20	15.5	3.9	1.9	chr6	113970321	113970372	(56835607)	+	G-rich	Low_complexity	1	54	(0)	3479420
26	0.0	0.0	0.0	chr6	113970946	113970970	(56835009)	+	(CTG)n	Simple_repeat	1	25	(0)	3479422
14	22.6	2.8	6.8	chr6	114175584	114175654	(56630325)	+	GA-rich	Low_complexity	1	73	(0)	3479750
19	21.9	4.6	1.5	chr6	114343048	114343112	(56462867)	+	(CTC)n	Simple_repeat	1	68	(0)	3479983
16	31.6	4.7	0.0	chr6	114343113	114343126	(56462853)	+	(CTCCCG)n	Simple_repeat	26	90	(0)	3479982
20	22.9	6.6	1.2	chr6	116251612	116251635	(54554344)	+	GA-rich	Low_complexity	1	51	(30)	3482312
22	11.2	2.5	0.0	chr6	116251636	116251675	(54554304)	+	(GGGAGG)n	Simple_repeat	1	41	(0)	3482313
20	22.9	6.6	1.2	chr6	116251676	116251687	(54554292)	+	GA-rich	Low_complexity	52	81	(0)	3482312
1676	25.4	8.6	1.5	chr6	116384727	116385602	(54420377)	C	L2a	LINE/L2	(0)	3426	2490	3482497
32	26.9	0.0	3.7	chr6	116616035	116616141	(54189838)	+	(TCCC)n	Simple_repeat	1	107	(0)	3482821
17	8.2	3.9	0.0	chr6	116616124	116616149	(54189830)	+	(CA)n	Simple_repeat	1	27	(0)	3482822
27	25.7	2.5	0.0	chr6	116784201	116784281	(54021698)	+	(ATGTAT)n	Simple_repeat	1	83	(0)	3483101
53	0.0	2.0	0.0	chr6	116936484	116936532	(53869447)	+	(AG)n	Simple_repeat	1	50	(0)	3483266
22	16.4	0.0	3.9	chr6	116936545	116936596	(53869383)	+	GA-rich	Low_complexity	1	52	(0)	3483267
23	25.6	3.5	1.1	chr6	117482937	117483021	(53322958)	+	G-rich	Low_complexity	1	88	(0)	3483951
22	0.0	0.0	0.0	chr6	118709533	118709556	(52096423)	+	(GT)n	Simple_repeat	1	24	(0)	3485554
31	0.0	0.0	0.0	chr6	118709557	118709583	(52096396)	+	(GA)n	Simple_repeat	1	27	(0)	3485555
66	29.5	0.5	2.8	chr6	119032473	119032686	(51773293)	+	G-rich	Low_complexity	1	215	(0)	3486014
846	19.2	1.6	6.5	chr6	119076054	119076253	(51729726)	+	MER20	DNA/hAT-Charlie	27	216	(3)	3486085
372	29.8	19.8	1.6	chr6	119344353	119344730	(51461249)	+	Tigger19b	DNA/TcMar-Tigger	60	523	(27)	3486492
17	9.1	0.0	0.0	chr6	121437355	121437378	(49368601)	+	(T)n	Simple_repeat	1	24	(0)	3488990
15	26.9	2.6	5.0	chr6	123803350	123803427	(47002552)	+	(CGC)n	Simple_repeat	1	80	(0)	3492190
18	22.1	0.0	0.0	chr6	124961901	124961943	(45844036)	+	(GTGC)n	Simple_repeat	1	43	(0)	3493631
15	31.2	1.5	1.5	chr6	124962859	124962923	(45843056)	+	GA-rich	Low_complexity	1	66	(0)	3493634
23	29.0	0.0	2.5	chr6	125025517	125025543	(45780436)	+	GA-rich	Low_complexity	1	79	(0)	3493738
31	13.1	0.0	0.0	chr6	125025544	125025595	(45780384)	+	(AAGG)n	Simple_repeat	1	52	(0)	3493739
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
12	4.5	4.0	3.9	chr6	125528842	125528866	(45277113)	+	(TCCC)n	Simple_repeat	1	26	(0)	3494456
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
1065	15.9	1.1	4.2	chr6	133286847	133287036	(37518943)	C	MER20	DNA/hAT-Charlie	(1)	218	35	3505046
21	0.0	0.0	0.0	chr6	133741779	133741801	(37064178)	+	(AC)n	Simple_repeat	1	23	(0)	3505640
28	27.7	2.2	1.1	chr6	133764553	133764642	(37041337)	+	GA-rich	Low_complexity	1	92	(0)	3505673
2982	18.6	9.7	3.3	chr6	134080150	134080823	(36725156)	+	MER72	LTR/ERV1	1	722	(0)	3506139
16	20.2	5.8	4.1	chr6	134175874	134175942	(36630037)	+	GA-rich	Low_complexity	1	73	(0)	3506326
12	20.7	0.0	2.9	chr6	134175910	134175944	(36630035)	+	G-rich	Low_complexity	1	35	(0)	3506327
346	13.2	3.6	0.0	chr6	134193704	134193756	(36612223)	+	MER66C	LTR/ERV1	368	422	(133)	3506360
49	7.1	0.0	4.8	chr6	134193772	134193854	(36612125)	+	(AGGGG)n	Simple_repeat	1	83	(0)	3506361
1832	17.0	1.5	3.5	chr6	134193855	134194202	(36611777)	C	MER6A	DNA/TcMar-Tigger	(224)	381	41	3506358
469	29.3	8.4	1.5	chr6	134249353	134249619	(36556360)	+	L2c	LINE/L2	2981	3267	(120)	3506492
435	34.0	7.0	11.7	chr6	134352228	134352663	(36453316)	+	L2b	LINE/L2	2962	3375	(0)	3506736
24	22.4	3.4	0.0	chr6	134707265	134707323	(36098656)	+	(CT)n	Simple_repeat	1	61	(0)	3507340
28	2.7	0.0	6.8	chr6	135181329	135181372	(35624607)	+	(TCC)n	Simple_repeat	1	44	(0)	3508088
1290	17.0	0.4	5.8	chr6	136088563	136088856	(34717123)	+	L1MB8	LINE/L1	5892	6169	(9)	3509342
456	24.8	10.6	1.9	chr6	136506213	136506426	(34299553)	C	hAT-N1_Mam	DNA/hAT-Tip100?	(64)	276	42	3509996
802	26.0	3.9	8.8	chr6	136728528	136728902	(34077077)	+	Charlie20a	DNA/hAT-Charlie	451	806	(1)	3510348
27	32.4	4.0	2.6	chr6	136767285	136767433	(34038546)	+	GA-rich	Low_complexity	1	155	(0)	3510419
13	10.4	2.9	5.6	chr6	136792031	136792065	(34013914)	+	(CCTCGC)n	Simple_repeat	1	36	(0)	3510465
818	27.2	6.9	13.0	chr6	137568567	137569111	(33236868)	C	LTR33	LTR/ERVL	(2)	513	5	3511639
436	29.4	11.0	2.8	chr6	137573723	137574079	(33231900)	C	L2c	LINE/L2	(1065)	2354	1965	3511641
12	19.4	0.0	5.1	chr6	138693300	138693338	(32112641)	+	(CCGCGC)n	Simple_repeat	1	39	(0)	3513360
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
2081	12.8	0.0	0.7	chr6	139148483	139148778	(31657201)	+	AluSz	SINE/Alu	2	295	(17)	3514204
18	19.2	0.0	2.3	chr6	139474685	139474728	(31331251)	+	(TTTC)n	Simple_repeat	1	44	(0)	3514740
248	14.6	0.0	0.0	chr6	139981966	139982006	(30823973)	+	LTR91	LTR/ERVL	88	128	(71)	3515502
1252	19.8	7.9	2.8	chr6	140898220	140898542	(29907437)	C	MER61A	LTR/ERV1	(0)	341	1	3516606
2173	14.9	2.9	4.5	chr6	142377118	142377539	(28428440)	C	MER61C	LTR/ERV1	(0)	428	14	3518437
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
41	2.6	0.0	0.0	chr6	143061109	143061148	(27744831)	+	(TG)n	Simple_repeat	1	40	(0)	3519337
43	13.4	4.1	2.0	chr6	144360007	144360032	(26445947)	+	(CTTTT)n	Simple_repeat	1	25	(0)	3521302
71	3.3	5.3	0.0	chr6	144360033	144360126	(26445853)	+	(TTCCC)n	Simple_repeat	1	99	(0)	3521303
43	13.4	4.1	2.0	chr6	144360127	144360196	(26445783)	+	(CTTTT)n	Simple_repeat	1	73	(0)	3521304
13	32.8	0.0	0.0	chr6	147203730	147203779	(23602200)	+	(GCC)n	Simple_repeat	1	50	(0)	3525091
15	13.2	2.9	2.8	chr6	147508440	147508474	(23297505)	+	(GCG)n	Simple_repeat	1	36	(0)	3525501
12	24.0	2.6	0.0	chr6	147508629	147508667	(23297312)	+	(GCG)n	Simple_repeat	1	40	(0)	3525502
27	23.3	4.0	3.3	chr6	148927143	148927238	(21878741)	+	GA-rich	Low_complexity	1	96	(0)	3527673
474	27.6	4.5	3.0	chr6	149034620	149034817	(21771162)	C	HAL1	LINE/L1	(710)	1797	1597	3527827
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
28	24.9	2.0	2.9	chr6	149566288	149566388	(21239591)	+	(CCCGC)n	Simple_repeat	1	100	(0)	3528682
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
585	24.1	22.0	0.0	chr6	149755693	149755987	(21049992)	C	L2a	LINE/L2	(2)	3424	3047	3529098
407	22.8	7.2	9.0	chr6	149755968	149756222	(21049757)	C	L2a	LINE/L2	(787)	2632	2383	3529098
20	22.3	4.8	3.4	chr6	150459687	150459770	(20346209)	+	(CTCCT)n	Simple_repeat	1	88	(0)	3530247
2339	11.9	0.3	0.0	chr6	150459794	150460103	(20345876)	+	AluSx1	SINE/Alu	2	312	(0)	3530248
450	30.6	4.4	5.3	chr6	150514876	150515082	(20290897)	C	L2	LINE/L2	(905)	2514	2310	3530339
11	26.6	5.6	2.7	chr6	150599796	150599812	(20206167)	+	G-rich	Low_complexity	1	29	(46)	3530476
15	14.9	0.0	0.0	chr6	150599813	150599842	(20206137)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3530477
11	26.6	5.6	2.7	chr6	150599843	150599866	(20206113)	+	G-rich	Low_complexity	30	75	(0)	3530476
29	3.2	0.0	0.0	chr6	150599879	150599910	(20206069)	+	(GAGCCC)n	Simple_repeat	1	32	(0)	3530478
855	20.6	1.8	2.1	chr6	150678104	150678306	(20127673)	C	L1MA7	LINE/L1	(65)	6235	5987	3530582
12	28.3	4.5	1.4	chr6	150745934	150745999	(20059980)	+	(GAGAATA)n	Simple_repeat	1	69	(0)	3530673
1078	23.6	7.7	1.5	chr6	150746014	150746344	(20059635)	C	Tigger9b	DNA/TcMar-Tigger	(271)	353	1	3530671
17	11.3	0.0	0.0	chr6	151325607	151325635	(19480344)	+	(GTGG)n	Simple_repeat	1	29	(0)	3531798
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
17	12.4	2.9	0.0	chr6	151390334	151390368	(19415611)	+	(TCCCCG)n	Simple_repeat	1	36	(0)	3531907
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
18	6.8	0.0	5.7	chr6	151390752	151390786	(19415193)	+	(CCCTC)n	Simple_repeat	1	35	(0)	3531911
15	20.1	0.0	0.0	chr6	151390815	151390866	(19415113)	+	(GCA)n	Simple_repeat	1	52	(0)	3531912
23	25.1	2.6	1.3	chr6	151391001	151391077	(19414902)	+	(CCTC)n	Simple_repeat	1	79	(0)	3531913
19	19.9	3.4	1.6	chr6	152637068	152637126	(18168853)	+	(CGCCCCG)n	Simple_repeat	1	61	(0)	3533799
18	30.4	0.0	2.9	chr6	153131242	153131310	(17674669)	+	GA-rich	Low_complexity	1	69	(0)	3534483
276	34.0	6.4	3.0	chr6	154920906	154921102	(15884877)	+	Plat_L3	LINE/CR1	2631	2834	(752)	3537269
214	34.2	12.1	2.0	chr6	154921371	154921519	(15884460)	C	MIRb	SINE/MIR	(53)	215	50	3537270
247	23.3	1.6	0.0	chr6	155013694	155013753	(15792226)	+	Tigger19a	DNA/TcMar-Tigger	261	321	(2)	3537475
31	17.2	2.5	3.7	chr6	157287646	157287725	(13518254)	+	(CCTC)n	Simple_repeat	1	82	(0)	3540678
575	9.5	0.0	0.0	chr6	157489774	157489847	(13316132)	C	AluJb	SINE/Alu	(17)	295	222	3540996
1114	22.6	14.1	4.2	chr6	157533148	157533677	(13272302)	C	L2a	LINE/L2	(1)	3425	2858	3541067
19	17.9	0.0	4.2	chr6	157981785	157981832	(12824147)	+	GA-rich	Low_complexity	1	48	(0)	3541773
395	32.6	10.6	0.4	chr6	158027592	158027871	(12778108)	C	L2c	LINE/L2	(4)	3383	3072	3541845
13	14.7	3.3	0.0	chr6	158049233	158049262	(12756717)	+	GA-rich	Low_complexity	1	31	(0)	3541870
419	24.6	13.7	9.3	chr6	158222347	158222491	(12583488)	C	MLT1L	LTR/ERVL-MaLR	(458)	152	3	3542168
756	16.9	0.0	0.8	chr6	158222688	158222811	(12583168)	+	FLAM_C	SINE/Alu	12	134	(9)	3542170
189	22.2	0.0	0.0	chr6	158645589	158645633	(12160346)	+	L2a	LINE/L2	2587	2631	(788)	3542865
595	27.2	10.1	3.2	chr6	158645860	158646124	(12159855)	+	L2a	LINE/L2	3116	3408	(18)	3542865
11	27.7	0.0	0.0	chr6	158818711	158818749	(11987230)	+	G-rich	Low_complexity	1	39	(0)	3543166
13	15.7	0.0	7.3	chr6	158818816	158818856	(11987123)	+	G-rich	Low_complexity	1	41	(0)	3543167
53	21.0	5.9	4.7	chr6	158924640	158924861	(11881118)	+	G-rich	Low_complexity	1	235	(0)	3543377
40	9.9	5.3	4.0	chr6	159761836	159761929	(11044050)	+	(CGCCCCG)n	Simple_repeat	1	99	(0)	3544562
36	5.0	0.0	0.0	chr6	163414675	163414716	(7391263)	+	(GAG)n	Simple_repeat	1	42	(0)	3549419
13	14.7	3.3	0.0	chr6	163414729	163414758	(7391221)	+	(GCG)n	Simple_repeat	1	31	(0)	3549420
17	8.1	3.9	0.0	chr6	163965944	163965969	(6840010)	+	(CA)n	Simple_repeat	1	27	(0)	3550162
29	32.5	0.7	3.5	chr6	165662232	165662373	(5143606)	+	(GCC)n	Simple_repeat	1	143	(0)	3552225
53	20.8	1.9	1.9	chr6	165668659	165668826	(5137153)	+	GA-rich	Low_complexity	1	168	(0)	3552231
1013	32.2	3.7	1.9	chr6	165894202	165894727	(4911252)	+	L3	LINE/CR1	3108	3643	(456)	3552512
15	0.0	4.5	0.0	chr6	166749846	166749867	(4056112)	+	(CCT)n	Simple_repeat	1	23	(0)	3553595
15	12.2	6.2	3.9	chr6	166862557	166862604	(3943375)	+	(TCCTCCC)n	Simple_repeat	1	51	(0)	3553712
2251	15.0	5.4	1.9	chr6	166936375	166936788	(3869191)	C	MSTB1	LTR/ERVL-MaLR	(3)	429	1	3553788
26	24.0	5.9	4.9	chr6	168030396	168030458	(2775521)	+	(TCCT)n	Simple_repeat	1	142	(0)	3555069
18	27.0	5.6	0.0	chr6	168030459	168030529	(2775450)	+	(CTTTC)n	Simple_repeat	1	75	(0)	3555070
213	32.0	2.3	4.6	chr6	168035740	168035870	(2770109)	+	MIRc	SINE/MIR	24	151	(117)	3555076
19	18.6	0.0	6.5	chr6	168106449	168106511	(2699468)	+	G-rich	Low_complexity	1	58	(0)	3555142
19	21.0	2.5	6.1	chr6	168441056	168441135	(2364844)	+	G-rich	Low_complexity	1	82	(0)	3555488
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
27	0.0	0.0	0.0	chr6	169702221	169702246	(1103733)	+	(CCCTGC)n	Simple_repeat	1	26	(0)	3556751
3346	23.6	2.7	2.9	chr7	365872	366774	(158979199)	C	L1MA5	LINE/L1	(21)	6279	5379	3558250
89	21.3	5.6	2.0	chr7	445887	446170	(158899803)	+	G-rich	Low_complexity	1	300	(0)	3558352
30	0.0	0.0	0.0	chr7	518324	518351	(158827622)	+	(GGGGAT)n	Simple_repeat	1	28	(0)	3558442
23	14.8	3.1	4.5	chr7	816458	816492	(158529481)	+	(CCCCTC)n	Simple_repeat	2	67	(0)	3558955
16	13.8	1.5	2.9	chr7	1579699	1579743	(157766230)	+	G-rich	Low_complexity	1	44	(0)	3560115
19	6.5	0.0	5.6	chr7	1669857	1669892	(157676081)	+	(CCCA)n	Simple_repeat	1	36	(0)	3560287
43	19.6	2.0	1.0	chr7	1670094	1670194	(157675779)	+	GA-rich	Low_complexity	1	103	(0)	3560288
648	17.9	5.1	4.7	chr7	2314817	2316847	(157029126)	+	(CACT)n	Simple_repeat	1	2135	(0)	3561121
1113	4.5	1.5	0.0	chr7	2469265	2469398	(156876575)	+	AluJb	SINE/Alu	1	136	(176)	3561485
12	10.9	0.0	8.6	chr7	4641684	4641718	(154704255)	+	(GCAGG)n	Simple_repeat	1	35	(0)	3565270
15	17.2	1.4	10.8	chr7	4641731	4641803	(154704170)	+	(CCCTG)n	Simple_repeat	1	74	(0)	3565271
18	25.1	1.4	5.3	chr7	5424138	5424160	(153921813)	+	(CCT)n	Simple_repeat	1	73	(0)	3566999
13	20.7	6.1	1.9	chr7	5424161	5424209	(153921764)	+	(CCCT)n	Simple_repeat	1	52	(0)	3567000
238	30.2	0.0	3.0	chr7	5595277	5595396	(153750577)	C	MIR3	SINE/MIR	(139)	129	16	3567436
38	25.8	3.0	1.5	chr7	5604259	5604390	(153741583)	+	G-rich	Low_complexity	1	136	(0)	3567455
100	19.1	2.6	5.5	chr7	6093118	6093275	(153252698)	+	(CTTC)n	Simple_repeat	1	152	(0)	3568592
181	33.1	12.4	3.0	chr7	6705941	6706108	(152639865)	+	MIR3	SINE/MIR	20	205	(3)	3569974
272	30.4	4.7	4.7	chr7	7323286	7323392	(152022581)	C	L2b	LINE/L2	(0)	3426	3320	3570935
552	28.1	5.2	2.9	chr7	7323440	7323789	(152022184)	C	L2b	LINE/L2	(233)	3142	2769	3570935
1058	20.4	1.3	10.2	chr7	7913465	7913710	(151432263)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	3571786
12	24.8	0.0	2.5	chr7	7913754	7913793	(151432180)	+	GA-rich	Low_complexity	1	40	(0)	3571787
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
23	24.4	3.8	1.2	chr7	7970357	7970436	(151375537)	+	(TCCCTC)n	Simple_repeat	1	83	(0)	3571877
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
14	18.3	3.6	5.3	chr7	16753584	16753638	(142592335)	+	(CCCTCGC)n	Simple_repeat	1	57	(0)	3582984
11	11.1	6.9	0.0	chr7	19117879	19117907	(140228066)	+	(CCCTTC)n	Simple_repeat	1	31	(0)	3586150
12	27.5	1.8	3.5	chr7	20785802	20785857	(138560116)	+	GA-rich	Low_complexity	1	57	(0)	3588261
587	27.0	14.1	3.3	chr7	23220734	23221066	(136124907)	C	LTR16D	LTR/ERVL	(17)	634	260	3591928
12	13.0	0.0	9.8	chr7	23471439	23471479	(135874494)	+	G-rich	Low_complexity	1	41	(0)	3592402
30	0.0	0.0	0.0	chr7	23491702	23491729	(135854244)	+	(TCC)n	Simple_repeat	1	28	(0)	3592433
30	19.9	0.0	0.0	chr7	23491730	23491795	(135854178)	+	(CCCT)n	Simple_repeat	1	66	(0)	3592434
828	5.1	0.0	0.0	chr7	23491796	23491893	(135854080)	C	HY3	scRNA	(3)	98	1	3592435
31	10.1	2.9	4.2	chr7	24573333	24573380	(134772593)	+	(GCG)n	Simple_repeat	3	50	(0)	3594108
16	10.0	4.0	7.7	chr7	24573401	24573450	(134772523)	+	G-rich	Low_complexity	1	52	(0)	3594109
14	17.7	0.0	0.0	chr7	24741871	24741902	(134604071)	+	(CTCCC)n	Simple_repeat	1	32	(0)	3594307
364	19.0	12.5	0.7	chr7	26002234	26002350	(133343623)	C	MIRb	SINE/MIR	(10)	258	121	3596251
185	27.6	11.6	7.6	chr7	26451973	26452262	(132893711)	+	L2	LINE/L2	2775	3077	(342)	3597069
14	12.5	0.0	0.0	chr7	26452263	26452288	(132893685)	+	(TTGT)n	Simple_repeat	1	26	(0)	3597070
25	21.4	0.0	4.2	chr7	26532822	26532892	(132813081)	+	(CCCT)n	Simple_repeat	1	71	(0)	3597201
33	0.0	0.0	0.0	chr7	26585495	26585522	(132760451)	+	(GT)n	Simple_repeat	1	28	(0)	3597283
17	22.5	5.0	1.6	chr7	27129604	27129663	(132216310)	+	GA-rich	Low_complexity	1	63	(0)	3598044
18	28.9	2.2	3.3	chr7	27130798	27130886	(132215087)	+	(CCCCT)n	Simple_repeat	1	91	(0)	3598046
11	27.3	2.0	2.0	chr7	27133636	27133685	(132212288)	+	G-rich	Low_complexity	1	51	(0)	3598049
36	23.2	1.0	3.9	chr7	27152075	27152177	(132193796)	+	(GT)n	Simple_repeat	1	104	(0)	3598064
31	5.5	0.0	0.0	chr7	27169594	27169631	(132176342)	+	(CCG)n	Simple_repeat	1	38	(0)	3598076
14	13.4	4.3	6.1	chr7	27169773	27169819	(132176154)	+	G-rich	Low_complexity	1	49	(0)	3598077
14	9.4	8.8	0.0	chr7	27175392	27175425	(132170548)	+	(TCCCC)n	Simple_repeat	1	37	(0)	3598085
15	28.8	4.6	0.0	chr7	27190083	27190147	(132155826)	+	(TCTCC)n	Simple_repeat	1	68	(0)	3598096
208	33.5	16.6	2.1	chr7	27478123	27478363	(131867610)	+	L2c	LINE/L2	3054	3336	(51)	3598561
15	11.5	7.9	0.0	chr7	28408943	28408980	(130936993)	+	(CCCCTA)n	Simple_repeat	1	41	(0)	3600023
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
207	24.9	0.5	6.9	chr7	30144144	30144227	(129201746)	C	MIRb	SINE/MIR	(10)	258	175	3602703
52	11.5	0.0	0.0	chr7	30294974	30295050	(129050923)	+	(AG)n	Simple_repeat	1	77	(0)	3602934
60	0.0	0.0	0.0	chr7	30295051	30295101	(129050872)	+	(GT)n	Simple_repeat	1	51	(0)	3602935
20	24.5	2.4	4.7	chr7	30469358	30469372	(128876601)	+	(TCCC)n	Simple_repeat	1	32	(54)	3603172
12	21.5	2.1	4.2	chr7	30469373	30469419	(128876554)	+	(CCTCTTC)n	Simple_repeat	1	48	(0)	3603173
20	24.5	2.4	4.7	chr7	30469420	30469441	(128876532)	+	(TCCC)n	Simple_repeat	33	86	(0)	3603172
43	25.8	1.5	6.8	chr7	32891819	32892022	(126453951)	+	(CCGC)n	Simple_repeat	1	207	(0)	3606930
1750	16.3	15.3	5.3	chr7	32941627	32942100	(126403873)	+	MER34C2	LTR/ERV1	25	554	(1)	3607042
29	7.5	0.0	0.0	chr7	35037001	35037043	(124308930)	+	(GGGAG)n	Simple_repeat	1	43	(0)	3610092
351	31.8	14.7	4.6	chr7	35647143	35647498	(123698475)	+	L2c	LINE/L2	2993	3382	(5)	3610997
18	15.8	8.6	1.6	chr7	36153193	36153250	(123192723)	+	(GCG)n	Simple_repeat	1	63	(0)	3611822
222	28.5	8.4	2.9	chr7	36279189	36279307	(123066666)	C	L2c	LINE/L2	(5)	3370	3238	3612038
267	20.6	13.2	4.2	chr7	36279499	36279594	(123066379)	C	LTR16A	LTR/ERVL	(226)	225	120	3612039
41	14.3	3.9	0.0	chr7	39085708	39085797	(120260176)	+	GA-rich	Low_complexity	1	93	(0)	3616052
2244	7.1	6.7	0.0	chr7	39520168	39520447	(119825526)	+	AluSg	SINE/Alu	1	300	(10)	3616633
38	2.6	0.0	0.0	chr7	39623633	39623671	(119722302)	+	(TCC)n	Simple_repeat	1	39	(0)	3616827
31	26.3	1.5	5.8	chr7	39811726	39811860	(119534113)	+	GA-rich	Low_complexity	1	137	(0)	3617214
13	4.2	8.0	0.0	chr7	39811842	39811867	(119534106)	+	(AAGAA)n	Simple_repeat	1	28	(0)	3617215
2286	11.1	0.0	0.0	chr7	39811876	39812182	(119533791)	+	AluYj4	SINE/Alu	2	308	(3)	3617216
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
109	21.2	2.0	0.4	chr7	41700634	41700881	(117645092)	+	GA-rich	Low_complexity	1	253	(0)	3620215
18	10.5	0.0	0.0	chr7	42152448	42152478	(117193495)	+	(CTCTCC)n	Simple_repeat	1	31	(0)	3620806
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
25	11.9	1.6	6.3	chr7	42237942	42238003	(117107970)	+	(CGC)n	Simple_repeat	1	63	(0)	3620932
44	2.3	0.0	0.0	chr7	42238004	42238047	(117107926)	+	(CCT)n	Simple_repeat	1	44	(0)	3620933
21	21.0	1.6	3.1	chr7	42238048	42238057	(117107916)	+	(CCCCGC)n	Simple_repeat	6	15	(0)	3620934
17	21.1	0.0	0.0	chr7	42889234	42889267	(116456706)	+	A-rich	Low_complexity	1	34	(0)	3621809
374	16.3	5.2	1.1	chr7	42889328	42889420	(116456553)	+	MER107	DNA/hAT-Charlie	68	164	(36)	3621810
3071	15.8	7.0	1.3	chr7	42932766	42933388	(116412585)	C	MER67B	LTR/ERV1	(0)	661	1	3621862
33	18.5	0.0	6.5	chr7	42933436	42933528	(116412445)	+	(CCCTC)n	Simple_repeat	1	93	(0)	3621863
12	7.9	3.2	6.2	chr7	43294367	43294397	(116051576)	+	GA-rich	Low_complexity	1	32	(0)	3622425
12	12.8	5.6	2.6	chr7	43758492	43758527	(115587446)	+	(GGCGCCA)n	Simple_repeat	1	38	(0)	3623125
23	15.4	1.9	1.9	chr7	43758557	43758608	(115587365)	+	(CCCTC)n	Simple_repeat	1	53	(0)	3623126
13	32.2	0.0	6.5	chr7	43758609	43758648	(115587325)	+	(CCCCCCG)n	Simple_repeat	1	92	(0)	3623127
8282	9.4	3.4	1.8	chr7	43813733	43815450	(115530523)	+	HERVIP10FH-int	LTR/ERV1	1	1428	(6309)	3623227
21180	6.6	1.6	0.8	chr7	43815428	43819534	(115526439)	+	HERVIP10FH-int	LTR/ERV1	687	5102	(0)	3623227
207	25.0	2.2	0.0	chr7	43905731	43905774	(115440199)	+	MIR3	SINE/MIR	112	156	(52)	3623404
280	25.3	5.6	4.0	chr7	43905786	43905962	(115440011)	C	Charlie18a	DNA/hAT-Charlie	(21)	321	142	3623405
1318	25.8	11.6	2.8	chr7	44085378	44085681	(115260292)	+	LTR8B	LTR/ERV1	331	756	(64)	3623782
543	26.8	29.1	2.4	chr7	44122556	44122975	(115222998)	+	L2a	LINE/L2	2807	3347	(79)	3623832
254	23.5	10.0	0.0	chr7	44264771	44264851	(115081122)	+	L1M5	LINE/L1	5712	5801	(441)	3624002
20	20.5	1.4	5.6	chr7	44276091	44276160	(115069813)	+	G-rich	Low_complexity	1	71	(0)	3624015
13	7.7	0.0	9.1	chr7	44324295	44324327	(115021646)	+	GA-rich	Low_complexity	1	33	(0)	3624062
12	12.5	0.0	3.6	chr7	44569090	44569117	(114776856)	+	(CCCCT)n	Simple_repeat	1	28	(0)	3624430
1870	24.1	11.4	4.7	chr7	44615129	44615756	(114730217)	C	L1MD1	LINE/L1	(5523)	1110	189	3624525
333	24.5	1.0	6.7	chr7	44626967	44626987	(114718986)	+	Charlie24	DNA/hAT-Charlie	2349	2363	(87)	3624561
2428	9.4	0.0	0.0	chr7	44626988	44627294	(114718679)	C	AluSg	SINE/Alu	(3)	307	1	3624562
30	15.1	7.3	0.0	chr7	44631798	44631865	(114714108)	+	(CT)n	Simple_repeat	1	73	(0)	3624571
12	13.7	0.0	0.0	chr7	44631874	44631897	(114714076)	+	(TAAA)n	Simple_repeat	1	24	(0)	3624572
1470	12.7	3.5	11.8	chr7	44733950	44734045	(114611928)	+	L1MA7	LINE/L1	6193	6290	(1)	3624748
435	15.6	0.0	1.1	chr7	44734043	44734133	(114611840)	+	L1M3	LINE/L1	4645	4734	(1412)	3624745
77	20.7	1.1	1.7	chr7	44734134	44734311	(114611662)	+	(CTCCC)n	Simple_repeat	1	180	(0)	3624752
1532	19.0	2.0	4.3	chr7	44734316	44734495	(114611478)	C	AluJr	SINE/Alu	(12)	300	124	3624753
326	22.2	17.1	0.8	chr7	44769805	44769931	(114576042)	+	L1ME3B	LINE/L1	5856	6007	(235)	3624805
36	27.0	1.5	3.7	chr7	44823528	44823660	(114522313)	+	(CTCC)n	Simple_repeat	1	135	(0)	3624965
278	26.6	0.0	0.0	chr7	45021852	45021915	(114324058)	+	Charlie9	DNA/hAT-Charlie	5	68	(2689)	3625363
17	15.5	2.8	0.0	chr7	45073624	45073659	(114272314)	+	GA-rich	Low_complexity	1	37	(0)	3625454
1477	21.5	3.5	5.6	chr7	47229023	47229553	(112116420)	+	L1MD	LINE/L1	4985	5516	(2479)	3628259
32	3.0	0.0	0.0	chr7	50963312	50963345	(108382628)	+	(CCT)n	Simple_repeat	1	34	(0)	3633018
709	19.2	0.8	0.0	chr7	51375966	51376085	(107969888)	C	AluJo	SINE/Alu	(191)	121	1	3633581
13	16.0	0.0	7.3	chr7	51376133	51376173	(107969800)	+	(CCCCT)n	Simple_repeat	1	41	(0)	3633582
1260	19.9	15.0	1.6	chr7	51376306	51376673	(107969300)	C	LTR37A	LTR/ERV1	(0)	426	1	3633583
30	17.0	2.0	7.0	chr7	55018905	55019002	(104326971)	+	(CTC)n	Simple_repeat	1	100	(0)	3638101
328	19.7	1.4	4.0	chr7	55065367	55065440	(104280533)	C	MER135	DNA	(141)	87	16	3638161
15	13.7	0.0	0.0	chr7	55365243	55365266	(103980707)	+	(A)n	Simple_repeat	1	24	(0)	3638525
12	15.3	11.4	0.0	chr7	55377411	55377454	(103968519)	+	(TGTC)n	Simple_repeat	1	49	(0)	3638550
15	29.0	1.5	4.4	chr7	55377432	55377498	(103968475)	+	(TCT)n	Simple_repeat	1	68	(0)	3638551
440	7.8	6.3	0.4	chr7	66098890	66099632	(93246341)	+	(AGG)n	Simple_repeat	1	790	(0)	3649224
22	11.9	0.0	0.0	chr7	66099714	66099750	(93246223)	+	(AGG)n	Simple_repeat	1	37	(0)	3649225
19	10.5	0.0	0.0	chr7	66099784	66099814	(93246159)	+	(AGG)n	Simple_repeat	1	31	(0)	3649225
12	5.6	0.0	0.0	chr7	66100275	66100293	(93245680)	+	(AGG)n	Simple_repeat	1	19	(0)	3649226
20	5.3	10.0	0.0	chr7	66100325	66100364	(93245609)	+	GA-rich	Low_complexity	1	44	(0)	3649227
1294	17.3	7.4	3.2	chr7	66100374	66100656	(93245317)	+	AluSc8	SINE/Alu	2	297	(14)	3649228
12	21.7	0.0	2.9	chr7	69598809	69598843	(89747130)	+	(TCTCC)n	Simple_repeat	1	35	(0)	3657062
14	19.8	0.0	2.7	chr7	69598883	69598919	(89747054)	+	(TCC)n	Simple_repeat	1	37	(0)	3657063
25	30.6	2.5	2.4	chr7	69599418	69599473	(89746500)	+	(CTCCCCT)n	Simple_repeat	1	84	(39)	3657064
12	22.8	2.5	2.4	chr7	69599474	69599513	(89746460)	+	(TTTC)n	Simple_repeat	1	41	(0)	3657065
25	30.6	2.5	2.4	chr7	69599514	69599537	(89746436)	+	(CTCCCCT)n	Simple_repeat	85	123	(0)	3657064
41	2.5	0.0	0.0	chr7	69600409	69600448	(89745525)	+	(GT)n	Simple_repeat	1	40	(0)	3657068
13	16.7	2.7	2.6	chr7	69600978	69601014	(89744959)	+	G-rich	Low_complexity	1	38	(0)	3657071
602	21.5	5.0	5.9	chr7	69617330	69617551	(89728422)	C	L2a	LINE/L2	(259)	3167	2948	3657090
233	22.5	0.0	13.6	chr7	69632265	69632367	(89713606)	+	L2c	LINE/L2	3295	3383	(4)	3657120
35	31.9	5.3	1.0	chr7	69632489	69632675	(89713298)	+	(CTCTCTT)n	Simple_repeat	1	197	(0)	3657121
16	16.3	3.7	5.4	chr7	69632620	69632673	(89713300)	+	(TCTTTT)n	Simple_repeat	1	56	(0)	3657122
446	35.6	9.4	5.6	chr7	69800783	69801178	(89544795)	+	L2b	LINE/L2	2962	3374	(1)	3657400
381	23.8	14.2	1.9	chr7	69860362	69860515	(89485458)	C	L1ME3	LINE/L1	(2)	6162	5987	3657485
56	10.3	0.0	1.1	chr7	70073011	70073098	(89272875)	+	(CTCCC)n	Simple_repeat	1	88	(0)	3657811
2415	10.6	0.0	0.0	chr7	70073229	70073529	(89272444)	+	AluSx	SINE/Alu	1	301	(11)	3657812
248	11.9	0.0	6.8	chr7	70693605	70693654	(88652319)	C	L2a	LINE/L2	(8)	3418	3321	3658696
259	19.4	14.3	4.0	chr7	70693622	70693696	(88652277)	C	MIRb	SINE/MIR	(18)	250	167	3658700
13	13.6	0.0	7.9	chr7	70695129	70695166	(88650807)	+	(GGCG)n	Simple_repeat	1	38	(0)	3658704
459	18.5	4.0	0.6	chr7	73648321	73649365	(85696608)	+	(CT)n	Simple_repeat	1	1087	(0)	3665149
11	13.3	5.7	2.7	chr7	73671472	73671506	(85674467)	+	(CCCTGG)n	Simple_repeat	1	37	(0)	3665214
875	15.8	3.2	1.3	chr7	73734687	73734838	(85611135)	C	AluJo	SINE/Alu	(21)	291	137	3665341
2196	10.7	0.7	0.0	chr7	73771115	73771413	(85574560)	+	AluJo	SINE/Alu	8	308	(4)	3665433
106	10.3	4.7	0.0	chr7	74270225	74270393	(85075580)	+	(CTCCC)n	Simple_repeat	1	178	(0)	3666635
21	29.9	3.7	1.8	chr7	74289798	74289906	(85056067)	+	G-rich	Low_complexity	1	113	(0)	3666691
86	29.7	3.2	0.3	chr7	74371508	74371787	(84974186)	+	GA-rich	Low_complexity	1	289	(0)	3666909
22	13.4	7.0	4.0	chr7	74453999	74454069	(84891904)	+	(CCTCG)n	Simple_repeat	1	76	(0)	3667134
14	18.7	2.2	4.3	chr7	74454098	74454143	(84891830)	+	(GGCCGG)n	Simple_repeat	1	47	(0)	3667135
22	23.2	0.0	0.0	chr7	75639245	75639290	(83706683)	+	G-rich	Low_complexity	1	46	(0)	3670120
276	23.1	5.3	1.3	chr7	75915461	75915577	(83430396)	+	MIR1_Amn	SINE/MIR	22	149	(59)	3670901
14	8.7	0.0	3.7	chr7	76069405	76069431	(83276542)	+	(AGG)n	Simple_repeat	1	27	(0)	3671251
635	12.9	2.3	0.3	chr7	76303268	76303404	(83042569)	+	FLAM_C	SINE/Alu	22	166	(0)	3671828
13	17.6	0.0	2.9	chr7	76358681	76358714	(82987259)	+	GA-rich	Low_complexity	1	34	(0)	3671938
13	23.8	0.0	2.1	chr7	77537132	77537169	(81808804)	+	G-rich	Low_complexity	8	45	(0)	3673971
34	0.0	0.0	0.0	chr7	77537204	77537234	(81808739)	+	(GGC)n	Simple_repeat	1	31	(0)	3673972
12	13.7	0.0	0.0	chr7	77537368	77537391	(81808582)	+	(GCC)n	Simple_repeat	1	24	(0)	3673973
1372	6.2	0.6	0.0	chr7	78058473	78058634	(81287339)	C	AluSq2	SINE/Alu	(19)	294	132	3674942
1348	25.6	4.8	6.3	chr7	84674254	84674741	(74671232)	+	MER90	LTR/ERV1	3	482	(93)	3683833
941	15.6	3.5	1.8	chr7	84674742	84674911	(74671062)	+	MLT2D	LTR/ERVL	1	173	(241)	3683834
2362	16.1	4.0	0.7	chr7	87456282	87456693	(71889280)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3687220
16438	7.2	0.6	0.5	chr7	90070307	90074304	(69271669)	+	L1PA5	LINE/L1	345	4331	(1815)	3690580
13	15.5	5.6	0.0	chr7	90403208	90403243	(68942730)	+	(TTTTG)n	Simple_repeat	1	38	(0)	3691026
16	31.2	0.0	0.0	chr7	92246063	92246121	(67099852)	+	(GGCGGT)n	Simple_repeat	1	59	(0)	3693578
13	24.4	4.2	0.0	chr7	92246093	92246140	(67099833)	+	G-rich	Low_complexity	1	50	(0)	3693579
15	9.6	2.7	5.3	chr7	92448026	92448062	(66897911)	+	(GGCG)n	Simple_repeat	1	38	(0)	3693910
565	28.4	16.5	0.0	chr7	93985267	93985474	(65360499)	+	MIR	SINE/MIR	14	262	(0)	3695993
13	11.2	3.2	3.1	chr7	94515748	94515778	(64830195)	+	A-rich	Low_complexity	1	32	(0)	3696761
13	16.0	0.0	3.2	chr7	94656131	94656161	(64689812)	+	(CTCCC)n	Simple_repeat	1	31	(0)	3696936
21	17.1	0.0	2.1	chr7	94656243	94656248	(64689725)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	3696937
19	5.6	5.1	2.4	chr7	94656249	94656287	(64689686)	+	(CCCCCAT)n	Simple_repeat	1	41	(0)	3696938
16	11.3	4.8	4.5	chr7	94658691	94658732	(64687241)	+	(TAA)n	Simple_repeat	1	44	(0)	3696940
12	8.8	10.5	2.4	chr7	95772508	95772545	(63573428)	+	G-rich	Low_complexity	1	42	(0)	3698469
15	29.2	2.9	1.4	chr7	95772666	95772733	(63573240)	+	(CCG)n	Simple_repeat	1	70	(0)	3698470
369	32.3	9.2	0.6	chr7	96302967	96303125	(63042848)	+	MER5B	DNA/hAT-Charlie	5	178	(0)	3699145
19	10.2	4.3	4.1	chr7	97005689	97005735	(62340238)	+	(TCCCTCC)n	Simple_repeat	1	49	(0)	3700151
18	13.9	3.1	0.0	chr7	97005760	97005791	(62340182)	+	(TA)n	Simple_repeat	1	33	(0)	3700152
30	13.9	3.0	2.9	chr7	97024723	97024789	(62321184)	+	GA-rich	Low_complexity	1	69	(0)	3700172
691	20.1	6.4	7.3	chr7	97179559	97179762	(62166211)	+	MER20	DNA/hAT-Charlie	18	219	(0)	3700395
4134	16.5	7.9	13.2	chr7	98116560	98117239	(61228734)	C	L1MC3	LINE/L1	(0)	7785	7066	3701962
596	18.2	2.5	5.6	chr7	98117240	98117365	(61228608)	C	FRAM	SINE/Alu	(0)	176	55	3701963
81	31.2	2.1	5.0	chr7	98400244	98400714	(60945259)	+	G-rich	Low_complexity	1	481	(0)	3702486
466	25.7	12.1	11.0	chr7	98728506	98728661	(60617312)	C	L1ME1	LINE/L1	(68)	6111	5932	3703256
69	22.6	2.4	3.7	chr7	98728669	98728877	(60617096)	+	(TTCC)n	Simple_repeat	1	214	(0)	3703259
639	22.1	2.6	4.6	chr7	98837618	98837692	(60508281)	C	MER92B	LTR/ERV1	(0)	636	562	3703532
1933	16.9	0.3	1.9	chr7	98837693	98838005	(60507968)	+	AluJo	SINE/Alu	2	309	(3)	3703533
625	28.4	15.7	7.7	chr7	99079532	99080289	(60265684)	+	L1M5	LINE/L1	2676	3532	(2614)	3703919
646	20.9	11.5	21.0	chr7	100122077	100122182	(59223791)	C	MIR	SINE/MIR	(139)	123	4	3705893
29	12.3	1.8	1.8	chr7	100124780	100124835	(59221138)	+	GA-rich	Low_complexity	1	57	(0)	3705904
15	15.6	2.1	6.1	chr7	100342266	100342313	(59003660)	+	(CCTCC)n	Simple_repeat	1	49	(0)	3706395
2403	9.0	0.7	0.0	chr7	100426213	100426512	(58919461)	+	AluSq	SINE/Alu	2	303	(10)	3706561
253	17.8	3.3	3.6	chr7	100426620	100427261	(58918712)	+	(CCTC)n	Simple_repeat	1	663	(0)	3706562
2517	6.7	0.0	0.0	chr7	100451081	100451378	(58894595)	+	AluSx	SINE/Alu	4	301	(11)	3706612
21	16.1	5.3	1.7	chr7	100472404	100472460	(58873513)	+	G-rich	Low_complexity	1	60	(0)	3706667
23	8.3	2.4	2.4	chr7	100477180	100477220	(58868753)	+	(GGA)n	Simple_repeat	1	42	(0)	3706674
27	6.1	0.0	0.0	chr7	100478316	100478350	(58867623)	+	(AG)n	Simple_repeat	1	35	(0)	3706675
60	0.0	0.0	0.0	chr7	100478351	100478401	(58867572)	+	(GT)n	Simple_repeat	1	51	(0)	3706676
16	22.6	0.0	0.0	chr7	100483847	100483887	(58862086)	+	G-rich	Low_complexity	1	41	(0)	3706693
13	4.9	0.0	4.3	chr7	100483937	100483959	(58862014)	+	(CTC)n	Simple_repeat	1	23	(0)	3706694
12	23.0	0.0	4.5	chr7	100489899	100489942	(58856031)	+	(GCCCT)n	Simple_repeat	1	44	(0)	3706699
246	17.1	0.0	0.0	chr7	100538654	100538694	(58807279)	+	tRNA-Thr-ACA	tRNA	2	42	(34)	3706843
19	32.3	0.0	5.9	chr7	100539598	100539716	(58806257)	+	G-rich	Low_complexity	1	119	(0)	3706845
180	25.0	4.5	5.9	chr7	100546544	100546611	(58799362)	+	L2c	LINE/L2	3287	3353	(34)	3706853
340	32.8	4.8	6.8	chr7	100587039	100587228	(58758745)	C	MIR3	SINE/MIR	(10)	198	13	3706900
19	16.4	2.4	0.0	chr7	100587247	100587294	(58758679)	+	(TCCC)n	Simple_repeat	1	49	(0)	3706901
2310	9.1	0.3	0.3	chr7	100587295	100587602	(58758371)	C	AluSx1	SINE/Alu	(4)	308	1	3706902
12	18.3	0.0	3.0	chr7	100603022	100603054	(58742919)	+	(CTCC)n	Simple_repeat	1	33	(0)	3706931
987	12.8	0.0	1.4	chr7	100629589	100629729	(58716244)	C	AluJo	SINE/Alu	(45)	267	129	3706995
266	23.3	2.7	7.6	chr7	100643536	100643614	(58702359)	C	L2a	LINE/L2	(0)	3426	3352	3707034
14	20.8	2.2	2.1	chr7	100674234	100674279	(58671694)	+	(CCCCTCC)n	Simple_repeat	1	47	(0)	3707121
1456	15.2	13.4	1.5	chr7	100706466	100706735	(58639238)	C	AluJo	SINE/Alu	(5)	307	1	3707180
1806	17.8	0.7	2.0	chr7	100794552	100794855	(58551118)	+	AluJo	SINE/Alu	2	301	(11)	3707389
47	21.1	3.0	2.9	chr7	100794860	100794993	(58550980)	+	GA-rich	Low_complexity	1	138	(0)	3707390
1093	13.3	1.2	2.9	chr7	100799677	100799849	(58546124)	+	AluJr	SINE/Alu	24	193	(119)	3707403
45	10.8	0.0	0.0	chr7	100889719	100889788	(58456185)	+	(CCTCC)n	Simple_repeat	1	70	(0)	3707582
17	21.1	4.2	4.7	chr7	100951476	100951547	(58394426)	+	G-rich	Low_complexity	1	71	(0)	3707713
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
21	26.0	1.1	5.6	chr7	100966807	100966837	(58379136)	+	(CCCT)n	Simple_repeat	1	67	(19)	3707728
17	19.2	1.9	3.8	chr7	100966838	100966889	(58379084)	+	(CCCCT)n	Simple_repeat	1	53	(0)	3707729
21	26.0	1.1	5.6	chr7	100966890	100966896	(58379077)	+	(CCCT)n	Simple_repeat	68	86	(0)	3707728
566	31.9	8.5	1.5	chr7	101066779	101067052	(58278921)	C	L4_B_Mam	LINE/RTE-X	(3516)	1425	1131	3707898
20	21.4	2.8	4.1	chr7	101085609	101085679	(58260294)	+	G-rich	Low_complexity	1	73	(0)	3707964
725	7.1	4.0	1.0	chr7	101138804	101138901	(58207072)	+	AluJo	SINE/Alu	24	124	(188)	3708076
15	27.6	0.0	4.5	chr7	101154651	101154716	(58191257)	+	G-rich	Low_complexity	1	66	(0)	3708122
34	22.6	0.0	0.0	chr7	101159957	101160028	(58185945)	+	(CA)n	Simple_repeat	1	72	(0)	3708132
15	11.2	4.8	4.5	chr7	101161182	101161223	(58184750)	+	G-rich	Low_complexity	1	44	(0)	3708133
14	15.4	7.9	4.4	chr7	101167243	101167305	(58178668)	+	GA-rich	Low_complexity	1	68	(0)	3708144
13	14.5	3.2	0.0	chr7	101167754	101167784	(58178189)	+	(TGCATG)n	Simple_repeat	1	32	(0)	3708145
15	0.0	0.0	7.4	chr7	101179141	101179167	(58166806)	+	(GGGA)n	Simple_repeat	1	27	(0)	3708164
408	21.2	5.8	8.8	chr7	101402366	101402525	(57943448)	+	MIR3	SINE/MIR	41	195	(13)	3708719
94	21.8	2.7	4.9	chr7	101402530	101402829	(57943144)	+	(TCCT)n	Simple_repeat	1	308	(0)	3708720
1260	16.5	8.2	1.4	chr7	101463228	101463510	(57882463)	C	L1MB2	LINE/L1	(216)	5955	5652	3708879
89	29.5	3.9	3.0	chr7	101463512	101463626	(57882347)	+	(CCTT)n	Simple_repeat	1	115	(0)	3708880
35	6.9	0.0	0.0	chr7	101463627	101463672	(57882301)	+	(CTTC)n	Simple_repeat	1	46	(0)	3708881
106	24.2	1.8	1.4	chr7	101463673	101463956	(57882017)	+	(CTTT)n	Simple_repeat	1	285	(0)	3708882
38	13.9	0.0	0.0	chr7	101528500	101528564	(57817409)	+	(CCCTC)n	Simple_repeat	1	65	(0)	3709056
1831	15.5	0.0	0.4	chr7	101528568	101528844	(57817129)	C	AluJo	SINE/Alu	(32)	280	5	3709057
18	7.3	11.6	0.0	chr7	101719539	101719581	(57626392)	+	(TGGTT)n	Simple_repeat	1	48	(0)	3709496
1713	16.3	2.8	2.1	chr7	101719583	101719739	(57626234)	C	AluJr	SINE/Alu	(21)	291	137	3709497
36	2.7	0.0	0.0	chr7	101743688	101743725	(57602248)	+	(CCT)n	Simple_repeat	1	38	(0)	3709558
222	30.4	5.9	5.1	chr7	101862218	101862335	(57483638)	C	L2b	LINE/L2	(8)	3367	3249	3709830
24	18.9	4.4	1.4	chr7	101912190	101912257	(57433716)	+	(CCT)n	Simple_repeat	1	71	(0)	3709928
1095	26.3	5.4	9.4	chr7	102134358	102134523	(57211450)	+	Charlie4a	DNA/hAT-Charlie	360	499	(9)	3710376
182	25.3	4.8	7.1	chr7	102147373	102147457	(57198516)	C	L2b	LINE/L2	(43)	3332	3250	3710406
659	26.9	11.5	7.9	chr7	102177568	102177883	(57168090)	+	L2a	LINE/L2	3019	3332	(94)	3710466
13	6.9	2.8	8.1	chr7	102287244	102287279	(57058694)	+	G-rich	Low_complexity	1	37	(0)	3710658
95	17.1	1.3	5.4	chr7	102430626	102430864	(56915109)	+	GA-rich	Low_complexity	1	242	(0)	3710991
728	19.4	6.8	0.0	chr7	103082506	103082629	(56263344)	C	AluJr	SINE/Alu	(179)	133	1	3712186
32	9.7	3.6	0.0	chr7	104328724	104328778	(55017195)	+	(GAG)n	Simple_repeat	1	57	(0)	3713984
29	3.2	0.0	0.0	chr7	104328789	104328820	(55017153)	+	(GCC)n	Simple_repeat	1	32	(0)	3713985
15	18.9	3.6	5.2	chr7	104848620	104848675	(54497298)	+	A-rich	Low_complexity	1	58	(0)	3714694
13	11.5	7.5	2.3	chr7	104933766	104933805	(54412168)	+	G-rich	Low_complexity	1	43	(0)	3714853
1470	26.3	8.6	4.7	chr7	105199602	105200019	(54145954)	+	L1MC4	LINE/L1	6467	6908	(1134)	3715311
2011	12.9	0.4	0.0	chr7	105344855	105345134	(54000839)	+	AluSq2	SINE/Alu	1	281	(32)	3715585
40	11.3	0.0	2.8	chr7	105345142	105345213	(54000760)	+	(GGAGG)n	Simple_repeat	1	72	(0)	3715586
12	14.6	0.0	5.9	chr7	105531920	105531953	(53814020)	+	A-rich	Low_complexity	1	34	(0)	3716068
29	10.0	5.7	4.0	chr7	105876591	105876663	(53469310)	+	G-rich	Low_complexity	1	74	(0)	3716733
17	10.3	0.0	3.0	chr7	105876749	105876781	(53469192)	+	(CGCC)n	Simple_repeat	1	33	(0)	3716734
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
19	19.4	3.4	3.3	chr7	107044605	107044665	(52301308)	+	G-rich	Low_complexity	1	61	(0)	3718509
12	11.1	6.9	0.0	chr7	107044751	107044779	(52301194)	+	G-rich	Low_complexity	1	31	(0)	3718510
15	30.4	2.8	1.4	chr7	107050111	107050181	(52295792)	+	G-rich	Low_complexity	1	73	(0)	3718518
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
3004	23.1	5.3	13.7	chr7	107726763	107727464	(51618509)	C	MLT1A-int	LTR/ERVL-MaLR	(1)	1370	748	3719519
1953	13.0	0.7	2.1	chr7	107727465	107727748	(51618225)	C	AluJb	SINE/Alu	(32)	280	1	3719520
15	24.9	0.0	5.2	chr7	108456439	108456496	(50889477)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3720552
42	21.1	8.9	1.2	chr7	111091742	111091899	(48254074)	+	GA-rich	Low_complexity	1	172	(0)	3723881
243	31.7	4.3	7.4	chr7	111958832	111959046	(47386927)	C	MER126	DNA	(120)	329	122	3725098
255	25.8	10.2	8.7	chr7	112162262	112162444	(47183529)	+	MLT1K	LTR/ERVL-MaLR	59	244	(351)	3725379
6625	19.4	2.9	4.5	chr7	112237990	112238800	(47107173)	+	L1MA3	LINE/L1	16	817	(6748)	3725495
14	21.1	0.0	0.0	chr7	113085944	113085977	(46259996)	+	G-rich	Low_complexity	1	34	(0)	3726682
237	33.5	14.7	2.6	chr7	114470866	114471169	(44874804)	+	L2c	LINE/L2	2994	3340	(47)	3728442
23	22.9	3.5	0.0	chr7	114931038	114931095	(44414878)	+	(TC)n	Simple_repeat	1	60	(0)	3729046
324	33.8	3.0	3.7	chr7	116804407	116804541	(42541432)	C	HAL1ME	LINE/L1	(2)	2463	2330	3731557
15	7.0	6.7	0.0	chr7	117085910	117085939	(42260034)	+	(AATTA)n	Simple_repeat	1	32	(0)	3732071
19	18.6	2.2	0.0	chr7	117086003	117086084	(42259889)	+	(CTCCC)n	Simple_repeat	1	83	(0)	3732072
16	23.3	0.0	0.0	chr7	117086107	117086141	(42259832)	+	(T)n	Simple_repeat	1	35	(0)	3732073
19	7.3	0.0	0.0	chr7	117952095	117952123	(41393850)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3733250
1985	29.6	7.6	4.7	chr7	118371391	118372489	(40973484)	C	ERV3-16A3_I-int	LTR/ERVL	(4084)	1142	10	3733806
795	32.9	7.8	0.3	chr7	118372494	118372859	(40973114)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	27	3733806
14	12.5	0.0	0.0	chr7	120857964	120857989	(38487984)	+	(CCG)n	Simple_repeat	1	26	(0)	3736916
18	4.8	0.0	0.0	chr7	120857994	120858015	(38487958)	+	(A)n	Simple_repeat	1	22	(0)	3736917
2107	11.0	0.6	0.0	chr7	121438422	121438749	(37907224)	C	L1P1	LINE/L1	(5468)	687	358	3737681
9705	5.0	0.8	0.0	chr7	121438750	121440798	(37905175)	+	L1PA5	LINE/L1	4089	6150	(4)	3737682
11	27.2	2.0	2.0	chr7	122304531	122304548	(37041425)	+	(CACCAC)n	Simple_repeat	1	28	(23)	3738935
16	0.0	0.0	0.0	chr7	122304549	122304568	(37041405)	+	(CCT)n	Simple_repeat	1	20	(0)	3738936
11	27.2	2.0	2.0	chr7	122304569	122304580	(37041393)	+	(CACCAC)n	Simple_repeat	29	51	(0)	3738935
15	12.4	2.5	4.9	chr7	122307495	122307534	(37038439)	+	(CCCTC)n	Simple_repeat	1	41	(0)	3738938
15	16.5	3.2	7.7	chr7	123692602	123692664	(35653309)	+	(AGGTGG)n	Simple_repeat	1	65	(0)	3740814
21	16.1	0.0	5.6	chr7	123692782	123692835	(35653138)	+	GA-rich	Low_complexity	1	54	(0)	3740815
14	12.5	0.0	0.0	chr7	123692845	123692870	(35653103)	+	(TGG)n	Simple_repeat	1	26	(0)	3740816
13	12.1	0.0	3.5	chr7	124101282	124101310	(35244663)	+	A-rich	Low_complexity	1	29	(0)	3741418
18	23.0	8.5	3.1	chr7	127392851	127392968	(31953005)	+	(GCCGAGG)n	Simple_repeat	1	128	(0)	3745668
44	14.2	2.0	3.9	chr7	127937410	127937510	(31408463)	+	(CTCTCC)n	Simple_repeat	1	103	(0)	3746424
15	7.8	0.0	3.5	chr7	127951823	127951851	(31394122)	+	(AACAA)n	Simple_repeat	1	29	(0)	3746437
348	26.9	13.9	2.1	chr7	127951943	127952188	(31393785)	+	L2a	LINE/L2	3095	3425	(1)	3746438
371	29.9	7.4	1.8	chr7	128135193	128135266	(31210707)	C	HAL1ME	LINE/L1	(1462)	1003	928	3746672
1477	20.6	4.9	6.2	chr7	128194815	128195269	(31150704)	C	L1MEf	LINE/L1	(4609)	2724	2276	3746776
223	24.8	16.4	1.7	chr7	128391073	128391191	(30954782)	C	L3	LINE/CR1	(609)	3490	3351	3747137
245	29.6	11.4	3.6	chr7	128391323	128391459	(30954514)	C	L3	LINE/CR1	(950)	3149	3001	3747137
1463	15.4	9.8	4.3	chr7	128523103	128523382	(30822591)	C	AluJr4	SINE/Alu	(15)	297	1	3747443
196	29.7	5.1	2.6	chr7	128523385	128523460	(30822513)	+	L2c	LINE/L2	3279	3356	(31)	3747444
643	25.7	11.9	0.9	chr7	128523564	128523771	(30822202)	C	MIRb	SINE/MIR	(38)	230	1	3747445
14	10.8	3.1	3.0	chr7	128531075	128531106	(30814867)	+	(GCCC)n	Simple_repeat	1	33	(0)	3747465
12	23.2	0.0	4.5	chr7	128531223	128531266	(30814707)	+	(CCCCACT)n	Simple_repeat	1	44	(0)	3747466
364	15.2	0.0	0.0	chr7	128701143	128701201	(30644772)	C	MER8	DNA/TcMar-Tigger	(180)	59	1	3747822
596	17.1	4.6	0.0	chr7	128701220	128701362	(30644611)	C	LTR10A	LTR/ERV1	(79)	530	413	3747823
50	12.6	0.0	4.1	chr7	128701365	128701461	(30644512)	+	G-rich	Low_complexity	1	97	(0)	3747824
2076	13.8	10.5	2.0	chr7	128701462	128701852	(30644121)	C	LTR10A	LTR/ERV1	(181)	428	1	3747823
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
14	29.5	0.0	3.3	chr7	128791864	128791924	(30554049)	+	G-rich	Low_complexity	1	61	(0)	3747980
13	18.9	4.5	2.2	chr7	128791931	128791974	(30553999)	+	(CCCT)n	Simple_repeat	1	46	(0)	3747981
12	18.7	0.0	3.0	chr7	128886811	128886843	(30459130)	+	GA-rich	Low_complexity	1	33	(0)	3748100
18	25.2	2.6	3.8	chr7	128904406	128904482	(30441491)	+	(CTCCCT)n	Simple_repeat	1	79	(0)	3748122
3304	10.0	2.3	1.3	chr7	129067166	129067640	(30278333)	C	LTR15	LTR/ERV1	(13)	480	1	3748406
15	18.3	2.1	4.2	chr7	129188540	129188586	(30157387)	+	(CTCCC)n	Simple_repeat	1	48	(0)	3748679
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
910	24.5	7.9	6.8	chr7	129824681	129825091	(29520882)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	143	3749923
16	24.7	0.0	0.0	chr7	129825231	129825265	(29520708)	+	(TC)n	Simple_repeat	1	35	(0)	3749924
1856	9.8	0.0	0.4	chr7	130357384	130357638	(28988335)	+	AluSp	SINE/Alu	45	298	(15)	3751037
1356	12.0	8.8	0.5	chr7	130998355	130998563	(28347410)	C	L1PA10	LINE/L1	(2)	6166	5939	3751944
383	32.7	9.9	7.1	chr7	130998564	130998711	(28347262)	C	L3	LINE/CR1	(1538)	2561	2414	3751942
11	15.2	7.5	2.3	chr7	131007595	131007634	(28338339)	+	GA-rich	Low_complexity	1	43	(0)	3751959
285	23.4	0.0	0.0	chr7	131007728	131007791	(28338182)	+	L3	LINE/CR1	3871	3934	(165)	3751960
24	8.9	8.2	0.0	chr7	131107223	131107271	(28238702)	+	(TCC)n	Simple_repeat	1	53	(0)	3752135
18	25.3	1.7	1.7	chr7	131110039	131110096	(28235877)	+	GA-rich	Low_complexity	1	59	(0)	3752139
386	34.0	13.9	3.6	chr7	132001035	132001678	(27344295)	C	L2c	LINE/L2	(337)	3082	2362	3753793
12	4.3	8.3	0.0	chr7	132318601	132318624	(27027349)	+	(AGGA)n	Simple_repeat	1	26	(0)	3754226
310	29.6	0.0	2.5	chr7	132417515	132417632	(26928341)	+	L2a	LINE/L2	3312	3426	(0)	3754374
42	24.5	3.4	0.8	chr7	132417643	132417759	(26928214)	+	GA-rich	Low_complexity	1	121	(0)	3754375
13	18.3	0.0	3.0	chr7	132425495	132425527	(26920446)	+	(CCT)n	Simple_repeat	1	33	(0)	3754387
23	11.2	0.0	0.0	chr7	132425598	132425636	(26920337)	+	(AGGC)n	Simple_repeat	1	39	(0)	3754388
15	10.0	2.8	5.4	chr7	132577277	132577312	(26768661)	+	(GCT)n	Simple_repeat	1	37	(0)	3754596
41	17.7	2.8	3.6	chr7	132577367	132577498	(26768475)	+	(CCTC)n	Simple_repeat	1	130	(0)	3754597
20	13.2	4.7	0.0	chr7	133138111	133138153	(26207820)	+	(TTCCC)n	Simple_repeat	1	45	(0)	3755459
12	19.6	2.9	0.0	chr7	133253193	133253227	(26092746)	+	(GGAGGCA)n	Simple_repeat	1	36	(0)	3755685
14743	14.4	5.5	2.4	chr7	133612943	133615574	(25730399)	+	Tigger2	DNA/TcMar-Tigger	2	2717	(1)	3756213
236	31.6	12.0	1.0	chr7	134724591	134724686	(24621287)	C	MIRc	SINE/MIR	(159)	109	2	3757927
221	25.5	2.1	0.0	chr7	134724690	134724736	(24621237)	+	MIRc	SINE/MIR	101	148	(120)	3757925
14	23.4	0.0	0.0	chr7	134724808	134724847	(24621126)	+	(CTCCTTC)n	Simple_repeat	1	40	(0)	3757928
42	25.1	5.4	0.0	chr7	134790032	134790160	(24555813)	+	GA-rich	Low_complexity	1	136	(0)	3758037
185	18.0	11.6	14.1	chr7	134790308	134790378	(24555595)	C	L2a	LINE/L2	(35)	3391	3323	3758038
262	27.1	7.4	4.1	chr7	134790361	134790465	(24555508)	C	MIRc	SINE/MIR	(151)	117	1	3758039
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
32	20.9	3.5	2.2	chr7	135719863	135719949	(23626024)	+	GA-rich	Low_complexity	1	90	(0)	3759467
30	3.5	0.0	0.0	chr7	135719957	135719986	(23625987)	+	(GA)n	Simple_repeat	1	30	(0)	3759468
12	20.1	2.6	2.6	chr7	135977720	135977757	(23368216)	+	(TTCC)n	Simple_repeat	1	39	(0)	3759917
12	23.1	0.0	2.6	chr7	135977742	135977779	(23368194)	+	(CCCT)n	Simple_repeat	1	38	(0)	3759918
19	23.9	5.2	3.7	chr7	136874516	136874592	(22471381)	+	(TC)n	Simple_repeat	1	81	(0)	3761184
138	9.4	4.7	1.9	chr7	137898919	137899171	(21446802)	+	GA-rich	Low_complexity	1	265	(0)	3762555
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
872	19.6	0.7	0.0	chr7	138945785	138945937	(20400036)	+	AluJo	SINE/Alu	141	294	(18)	3764593
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
580	33.0	7.0	0.9	chr7	140231749	140231977	(19113996)	C	MIRc	SINE/MIR	(14)	254	11	3766943
2438	8.0	0.0	0.0	chr7	140444292	140444592	(18901381)	+	AluSg4	SINE/Alu	1	301	(9)	3767459
14	20.9	4.8	4.6	chr7	140626604	140626665	(18719308)	+	(TCCT)n	Simple_repeat	1	65	(0)	3767905
19	4.3	0.0	0.0	chr7	141071482	141071505	(18274468)	+	(GA)n	Simple_repeat	1	24	(0)	3768721
61	0.0	1.7	0.0	chr7	141220312	141220369	(18125604)	+	(AAT)n	Simple_repeat	1	59	(0)	3768959
13	20.4	2.4	2.4	chr7	141220521	141220561	(18125412)	+	G-rich	Low_complexity	1	42	(0)	3768960
31	19.1	0.0	0.0	chr7	141621570	141621631	(17724342)	+	GA-rich	Low_complexity	1	62	(0)	3769574
18	23.3	2.2	0.0	chr7	141621635	141621679	(17724294)	+	(TG)n	Simple_repeat	1	46	(0)	3769575
17	21.6	5.6	0.0	chr7	143381260	143381313	(15964660)	+	(CTCC)n	Simple_repeat	1	57	(0)	3771838
371	28.8	12.0	2.9	chr7	144835294	144835497	(14510476)	C	MIRb	SINE/MIR	(23)	245	21	3773750
392	28.3	8.8	0.7	chr7	148627143	148627288	(10718685)	+	L1ME3G	LINE/L1	493	651	(273)	3779120
15	16.9	4.0	3.9	chr7	148883813	148883863	(10462110)	+	(CCCCGG)n	Simple_repeat	1	51	(0)	3779538
29	22.4	2.9	7.1	chr7	148884095	148884231	(10461742)	+	(CGC)n	Simple_repeat	1	141	(0)	3779539
961	16.4	2.3	9.8	chr7	148916557	148916792	(10429181)	C	MER20	DNA/hAT-Charlie	(0)	219	2	3779600
1084	17.8	4.3	9.0	chr7	148916793	148917014	(10428959)	+	MER5C	DNA/hAT-Charlie	112	313	(0)	3779599
28	31.0	0.0	0.0	chr7	148941873	148941948	(10404025)	+	(TA)n	Simple_repeat	1	76	(0)	3779657
588	11.8	0.0	0.0	chr7	148941968	148942043	(10403930)	C	AluSc	SINE/Alu	(30)	279	204	3779658
808	10.6	0.0	6.8	chr7	148942044	148942175	(10403798)	+	FLAM_C	SINE/Alu	13	135	(8)	3779659
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
189	31.0	9.1	4.6	chr7	148987805	148988044	(10357929)	+	L3b	LINE/CR1	2091	2342	(1757)	3779773
325	22.0	2.9	0.8	chr7	148988250	148988330	(10357643)	+	L2b	LINE/L2	3308	3387	(0)	3779774
13	19.0	8.3	0.0	chr7	149027905	149027952	(10318021)	+	(CCCTCT)n	Simple_repeat	1	52	(0)	3779849
369	31.1	11.1	0.0	chr7	149855500	149855676	(9490297)	C	LTR78	LTR/ERV1	(436)	868	670	3781246
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
12	23.3	3.7	3.6	chr7	150369549	150369602	(8976371)	+	(TGGTGGC)n	Simple_repeat	1	56	(0)	3781960
284	28.4	2.6	0.0	chr7	150445554	150445627	(8900346)	C	L2b	LINE/L2	(37)	3338	3263	3782085
1118	32.3	6.2	3.2	chr7	150911736	150912454	(8433519)	+	LTR83	LTR/ERVL	8	749	(31)	3782640
319	32.0	0.7	3.2	chr7	150949470	150949627	(8396346)	+	MER112	DNA/hAT-Charlie	98	251	(10)	3782702
13	22.6	6.5	3.7	chr7	150978350	150978426	(8367547)	+	(CCCCCGCT)n	Simple_repeat	1	82	(0)	3782734
25	24.8	1.9	4.7	chr7	150978427	150978434	(8367539)	+	(CGCCCC)n	Simple_repeat	70	106	(0)	3782733
13	20.3	6.7	0.0	chr7	151020442	151020486	(8325487)	+	(CTCTC)n	Simple_repeat	1	48	(0)	3782793
18	27.5	7.3	0.0	chr7	151061675	151061774	(8284199)	+	(CTCCTCT)n	Simple_repeat	1	107	(0)	3782840
223	32.8	9.4	1.6	chr7	151088822	151088948	(8257025)	+	L2	LINE/L2	2434	2571	(848)	3782880
828	16.3	3.0	0.0	chr7	151094685	151094813	(8251160)	C	AluJr4	SINE/Alu	(179)	133	1	3782892
43	16.1	0.0	1.2	chr7	151094816	151094896	(8251077)	+	(CCCT)n	Simple_repeat	1	81	(0)	3782893
1451	16.9	2.1	2.1	chr7	151094897	151095139	(8250834)	C	AluJr	SINE/Alu	(34)	278	36	3782894
17	14.2	0.0	6.7	chr7	151238904	151238948	(8107025)	+	(CCTCC)n	Simple_repeat	1	45	(0)	3783091
14	17.4	4.1	3.9	chr7	151240329	151240377	(8105596)	+	G-rich	Low_complexity	1	51	(0)	3783094
19	29.0	0.0	3.9	chr7	151251913	151251989	(8093984)	+	(GGCCC)n	Simple_repeat	1	77	(0)	3783106
12	20.4	8.6	1.6	chr7	151252224	151252281	(8093692)	+	GA-rich	Low_complexity	1	63	(0)	3783107
13	19.1	3.8	5.5	chr7	151276076	151276128	(8069845)	+	GA-rich	Low_complexity	1	55	(0)	3783149
13	17.1	4.9	2.3	chr7	151276281	151276321	(8069652)	+	GA-rich	Low_complexity	1	43	(0)	3783150
29	10.1	3.6	1.8	chr7	151341712	151341766	(8004207)	+	(GCG)n	Simple_repeat	1	57	(0)	3783281
251	30.6	3.1	4.6	chr7	151396255	151396384	(7949589)	+	L2c	LINE/L2	3038	3165	(222)	3783366
18	20.0	6.2	1.4	chr7	151396494	151396558	(7949415)	+	G-rich	Low_complexity	1	69	(0)	3783367
361	31.0	1.0	0.0	chr7	151396566	151396665	(7949308)	C	MER81	DNA/hAT-Blackjack	(12)	102	2	3783368
300	31.3	5.2	3.8	chr7	151429110	151429242	(7916731)	C	MIR	SINE/MIR	(70)	192	58	3783421
28	19.2	3.3	0.0	chr7	151477912	151477972	(7868001)	+	GA-rich	Low_complexity	1	63	(0)	3783508
14	11.7	3.6	0.0	chr7	151876780	151876807	(7469166)	+	(CGC)n	Simple_repeat	1	29	(0)	3784166
12	7.2	10.3	0.0	chr7	152411483	152411511	(6934462)	+	(CTCC)n	Simple_repeat	1	32	(0)	3785063
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
252	28.6	7.7	1.4	chr7	155000952	155001083	(4344890)	+	L2c	LINE/L2	3241	3353	(34)	3789010
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
13	10.8	6.7	0.0	chr7	155449380	155449409	(3896564)	+	(TCCCC)n	Simple_repeat	1	32	(0)	3789655
32	0.0	0.0	0.0	chr7	155449413	155449442	(3896531)	+	(CGGAGAG)n	Simple_repeat	1	30	(0)	3789656
57	12.4	3.1	0.0	chr7	155509462	155509558	(3836415)	+	GA-rich	Low_complexity	1	100	(0)	3789721
15	11.2	4.8	4.5	chr7	155807428	155807469	(3538504)	+	G-rich	Low_complexity	1	44	(0)	3790112
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
48	29.4	2.7	4.5	chr7	156892630	156892889	(2453084)	+	G-rich	Low_complexity	1	267	(0)	3791499
2079	9.1	0.7	2.5	chr7	156953116	156953425	(2392548)	C	AluSp	SINE/Alu	(0)	313	3	3791620
367	23.9	9.6	2.7	chr7	156953426	156953541	(2392432)	C	L1MD2	LINE/L1	(227)	6132	6005	3791619
1762	16.3	5.2	0.0	chr7	156995585	156995860	(2350113)	+	AluJr4	SINE/Alu	5	295	(17)	3791685
13187	11.3	2.6	6.3	chr7	156995862	156996071	(2349902)	C	Tigger1	DNA/TcMar-Tigger	(193)	2225	2088	3791686
1876	15.2	3.3	0.0	chr7	156996072	156996360	(2349613)	C	AluJo	SINE/Alu	(12)	300	2	3791687
18	17.0	4.3	0.0	chr7	157000581	157000626	(2345347)	+	G-rich	Low_complexity	1	48	(0)	3791691
13	13.9	2.9	2.9	chr7	157000719	157000752	(2345221)	+	GA-rich	Low_complexity	1	35	(0)	3791692
636	22.9	9.1	2.8	chr7	157000757	157001003	(2344970)	C	L1MB2	LINE/L1	(16)	6155	5892	3791693
16	3.6	6.5	3.0	chr7	157003946	157003977	(2341996)	+	(GGA)n	Simple_repeat	1	33	(0)	3791698
58	13.3	3.1	3.8	chr7	157007274	157007402	(2338571)	+	GA-rich	Low_complexity	1	133	(0)	3791703
1405	11.4	3.0	0.0	chr7	157216357	157216584	(2129389)	C	L1PA14	LINE/L1	(0)	6161	5927	3792069
388	19.3	1.1	0.0	chr7	157277479	157277566	(2068407)	+	MER5C	DNA/hAT-Charlie	126	214	(99)	3792179
370	25.7	12.5	5.6	chr7	157432481	157432822	(1913151)	+	MLT1D	LTR/ERVL-MaLR	12	380	(125)	3792471
12	17.6	4.5	4.3	chr7	158705144	158705187	(640786)	+	GA-rich	Low_complexity	1	46	(0)	3793569
375	21.6	5.8	1.0	chr7	158864156	158864253	(481720)	C	LTR56	LTR/ERV1	(342)	103	1	3793810
17	15.6	0.0	0.0	chr8	543924	543952	(144594684)	+	G-rich	Low_complexity	1	29	(0)	3794931
12	0.0	9.1	0.0	chr8	6561367	6561388	(138577248)	+	(CATT)n	Simple_repeat	1	24	(0)	3802250
198	25.8	2.1	14.7	chr8	6561420	6561528	(138577108)	+	L3	LINE/CR1	1765	1859	(2240)	3802251
21	22.2	0.0	6.5	chr8	6708508	6708584	(138430052)	+	G-rich	Low_complexity	1	77	(0)	3802488
14	14.5	5.0	2.4	chr8	6733321	6733366	(138405270)	+	(CTCC)n	Simple_repeat	1	47	(0)	3802517
14	18.7	3.6	5.3	chr8	6824271	6824325	(138314311)	+	GA-rich	Low_complexity	1	57	(0)	3802645
267	30.9	8.7	5.5	chr8	6824356	6824526	(138314110)	+	MamRep137	DNA/TcMar-Tigger	57	240	(270)	3802646
1820	20.7	6.1	0.9	chr8	8789602	8790021	(136348615)	+	MER74A	LTR/ERVL	1	443	(115)	3805340
29	0.0	0.0	0.0	chr8	9829736	9829760	(135308876)	+	(TA)n	Simple_repeat	1	25	(0)	3807104
28	7.7	3.2	6.2	chr8	9905837	9905899	(135232737)	+	G-rich	Low_complexity	1	65	(0)	3807244
22	20.8	1.6	3.1	chr8	10601181	10601258	(134537378)	+	G-rich	Low_complexity	1	76	(0)	3808326
18	6.4	6.1	0.0	chr8	10730665	10730697	(134407939)	+	(GGGA)n	Simple_repeat	1	35	(0)	3808552
185	37.6	3.1	0.8	chr8	11067972	11068097	(134070539)	+	L2c	LINE/L2	3249	3377	(10)	3809038
16	32.6	0.0	0.0	chr8	11201368	11201422	(133937214)	+	G-rich	Low_complexity	1	55	(0)	3809244
208	30.5	9.8	3.9	chr8	11348346	11348552	(133790084)	C	MIRc	SINE/MIR	(19)	249	21	3809475
403	32.6	4.7	1.0	chr8	11457393	11457654	(133680982)	+	L2a	LINE/L2	3104	3426	(0)	3809616
28	24.9	4.7	4.9	chr8	11474777	11474905	(133663731)	+	GA-rich	Low_complexity	1	178	(0)	3809640
14	21.6	0.0	6.0	chr8	11474906	11474955	(133663681)	+	G-rich	Low_complexity	1	50	(0)	3809641
17	6.7	3.0	2.9	chr8	11677172	11677204	(133461432)	+	(GGGGA)n	Simple_repeat	1	34	(0)	3809991
1618	23.8	4.6	0.4	chr8	11696108	11696562	(133442074)	C	L1ME1	LINE/L1	(0)	6179	5705	3810023
2064	14.2	0.7	0.3	chr8	11787592	11787900	(133350736)	C	AluJb	SINE/Alu	(2)	310	1	3810158
411	30.8	3.3	2.7	chr8	11788045	11788194	(133350442)	C	MIRc	SINE/MIR	(52)	216	66	3810159
348	25.3	7.8	1.0	chr8	11807508	11807603	(133331033)	+	L1MC2	LINE/L1	6231	6333	(11)	3810188
206	19.6	8.2	1.8	chr8	11891779	11891835	(133246801)	+	MIR3	SINE/MIR	119	179	(29)	3810351
27	4.9	4.7	0.0	chr8	11891836	11891878	(133246758)	+	(CCTCT)n	Simple_repeat	1	45	(0)	3810352
2061	12.9	0.0	2.6	chr8	11891882	11892184	(133246452)	C	AluSx3	SINE/Alu	(16)	295	1	3810353
14	24.9	3.9	0.0	chr8	12755556	12755607	(132383029)	+	G-rich	Low_complexity	1	54	(0)	3811507
262	27.4	11.9	3.6	chr8	12778307	12778529	(132360107)	+	L1ME4a	LINE/L1	5670	5913	(211)	3811551
815	16.9	3.0	0.0	chr8	12778603	12778732	(132359904)	+	L1PA8A	LINE/L1	5996	6129	(2)	3811552
1527	23.8	14.3	0.9	chr8	12972063	12972715	(132165921)	C	LTR50	LTR/ERVL	(33)	762	3	3811917
12	15.3	3.5	0.0	chr8	13033760	13033788	(132104848)	+	G-rich	Low_complexity	1	30	(0)	3812016
922	10.8	0.0	0.0	chr8	13057536	13057655	(132080981)	+	AluJr	SINE/Alu	178	297	(15)	3812072
2395	5.4	0.4	0.0	chr8	13057791	13058119	(132080517)	C	AluY	SINE/Alu	(0)	311	1	3812073
2070	14.3	0.3	0.7	chr8	13244298	13244598	(131894038)	C	AluJr	SINE/Alu	(12)	300	1	3812364
50	0.0	0.0	0.0	chr8	13273687	13273729	(131864907)	+	(TG)n	Simple_repeat	1	43	(0)	3812418
25	16.2	3.6	0.0	chr8	13273731	13273786	(131864850)	+	G-rich	Low_complexity	1	58	(0)	3812419
1119	20.6	2.0	13.6	chr8	13560601	13560931	(131577705)	+	MLT1B	LTR/ERVL-MaLR	3	294	(96)	3812879
12	8.9	4.2	0.0	chr8	15540512	15540535	(129598101)	+	(CTG)n	Simple_repeat	1	25	(0)	3815553
450	28.2	7.8	5.0	chr8	15573368	15573774	(129564862)	C	LTR75B	LTR/ERVL	(0)	608	111	3815603
19	24.5	5.8	2.2	chr8	17002708	17002794	(128135842)	+	GA-rich	Low_complexity	1	92	(0)	3817553
20	19.1	3.1	4.5	chr8	17157071	17157135	(127981501)	+	(CGC)n	Simple_repeat	1	67	(0)	3817789
2748	16.7	3.3	7.4	chr8	17168473	17169111	(127969525)	C	L1MB3	LINE/L1	(2)	6181	5570	3817804
18	14.0	2.4	2.4	chr8	17413210	17413250	(127725386)	+	(CCT)n	Simple_repeat	1	42	(0)	3818144
37	9.6	2.9	1.4	chr8	17499322	17499391	(127639245)	+	(TC)n	Simple_repeat	1	72	(0)	3818286
29	3.2	0.0	0.0	chr8	17630623	17630654	(127507982)	+	(CCCTC)n	Simple_repeat	1	32	(0)	3818491
1243	20.5	7.5	10.5	chr8	17832053	17832243	(127306393)	C	MSTB	LTR/ERVL-MaLR	(277)	188	1	3818781
26	18.2	3.1	1.5	chr8	17832244	17832308	(127306328)	+	GA-rich	Low_complexity	1	67	(0)	3818784
17	30.9	2.9	1.4	chr8	18078852	18078921	(127059715)	+	(TC)n	Simple_repeat	1	72	(0)	3819156
13	14.4	2.3	6.7	chr8	20197135	20197178	(124941458)	+	(CTTCC)n	Simple_repeat	1	45	(0)	3822435
12	11.9	4.8	6.8	chr8	20275598	20275639	(124862997)	+	GA-rich	Low_complexity	1	44	(0)	3822560
13	14.1	10.3	3.1	chr8	21041282	21041339	(124097297)	+	(GCAGCG)n	Simple_repeat	1	64	(0)	3823813
197	34.2	13.0	6.9	chr8	21779823	21780839	(123357797)	+	L2c	LINE/L2	1564	2648	(771)	3824998
1151	21.4	12.1	1.5	chr8	21780840	21781104	(123357532)	+	AluJb	SINE/Alu	1	297	(5)	3824999
49	17.4	4.1	1.6	chr8	21788807	21788927	(123349709)	+	(TCTC)n	Simple_repeat	1	126	(0)	3825006
384	39.2	4.0	0.3	chr8	21812455	21812746	(123325890)	C	Plat_L3	LINE/CR1	(692)	2894	2592	3825058
17	7.0	3.3	0.0	chr8	22050638	22050667	(123087969)	+	(GAGGGA)n	Simple_repeat	1	31	(0)	3825494
40	4.5	0.0	0.0	chr8	22050747	22050792	(123087844)	+	(CCCTGGGT)n	Simple_repeat	1	46	(0)	3825495
281	34.8	10.1	2.3	chr8	22135186	22135513	(123003123)	C	L2c	LINE/L2	(52)	3335	3002	3825625
17	27.5	1.1	5.7	chr8	22156503	22156589	(122982047)	+	(GCCCCG)n	Simple_repeat	1	88	(0)	3825651
15	10.1	2.9	2.9	chr8	22156748	22156781	(122981855)	+	(GAGCCG)n	Simple_repeat	1	35	(0)	3825652
29	31.5	1.6	5.8	chr8	22165128	22165313	(122973323)	+	G-rich	Low_complexity	1	189	(0)	3825674
441	37.1	0.5	5.0	chr8	22211210	22211430	(122927206)	C	MIRc	SINE/MIR	(39)	229	19	3825766
12	17.5	7.9	4.4	chr8	22561396	22561458	(122577178)	+	(GCCTGC)n	Simple_repeat	1	68	(0)	3826467
338	23.8	9.5	0.0	chr8	22561601	22561705	(122576931)	+	MIRb	SINE/MIR	114	229	(39)	3826468
13	15.3	2.5	4.9	chr8	22658782	22658821	(122479815)	+	G-rich	Low_complexity	1	41	(0)	3826604
24	6.8	0.0	0.0	chr8	22877935	22877965	(122260671)	+	(CA)n	Simple_repeat	1	31	(0)	3826961
16	16.5	0.0	0.0	chr8	22999487	22999513	(122139123)	+	(C)n	Simple_repeat	1	27	(0)	3827189
434	29.6	8.2	2.2	chr8	23067378	23067606	(122071030)	+	L1MEc	LINE/L1	1540	1849	(4784)	3827291
23	18.4	2.0	7.0	chr8	23068334	23068434	(122070202)	+	A-rich	Low_complexity	1	95	(0)	3827293
20	27.2	3.2	3.1	chr8	23074911	23075003	(122063633)	+	(CTCT)n	Simple_repeat	1	96	(0)	3827308
225	29.4	13.6	1.3	chr8	23320984	23321138	(121817498)	+	L2	LINE/L2	2538	2714	(705)	3827709
19	28.1	1.5	0.0	chr8	23683118	23683182	(121455454)	+	(TCCCTC)n	Simple_repeat	1	66	(0)	3828343
1834	24.5	9.1	4.4	chr8	24939914	24940635	(120198001)	+	MER72B	LTR/ERV1	5	763	(5)	3830207
398	24.5	2.8	7.3	chr8	24941826	24941975	(120196661)	C	MER5A1	DNA/hAT-Charlie	(7)	159	17	3830210
24	31.6	2.8	3.4	chr8	24942030	24942172	(120196464)	+	(CCCTACC)n	Simple_repeat	1	147	(0)	3830211
12	26.3	0.0	5.5	chr8	24956547	24956601	(120182035)	+	GA-rich	Low_complexity	1	55	(0)	3830234
21	9.7	0.0	0.0	chr8	25000401	25000434	(120138202)	+	(GAGG)n	Simple_repeat	1	34	(0)	3830314
27557	3.9	0.5	0.1	chr8	25654943	25660944	(119477692)	C	L1PA3	LINE/L1	(3)	6152	132	3831453
232	17.9	9.3	2.5	chr8	25689154	25689233	(119449403)	C	MIR3	SINE/MIR	(12)	196	111	3831503
12	21.8	0.0	4.9	chr8	26020605	26020645	(119117991)	+	GA-rich	Low_complexity	1	41	(0)	3831948
183	30.0	7.9	0.0	chr8	26038757	26038826	(119099810)	C	L3b	LINE/CR1	(858)	4374	4299	3831976
2344	14.5	4.8	0.0	chr8	26304928	26305342	(118833294)	C	L1MB2	LINE/L1	(15)	6156	5721	3832519
13	0.0	0.0	0.0	chr8	26383168	26383184	(118755452)	+	(ACA)n	Simple_repeat	1	17	(0)	3832642
25	23.1	3.3	3.2	chr8	26513914	26514004	(118624632)	+	(CCCTC)n	Simple_repeat	1	94	(0)	3832884
29	15.3	1.6	1.6	chr8	26599531	26599591	(118539045)	+	(CCCTC)n	Simple_repeat	1	62	(0)	3833013
16	18.3	4.5	0.0	chr8	26599584	26599627	(118539009)	+	(CTTTCT)n	Simple_repeat	1	46	(0)	3833014
19	19.3	5.5	3.9	chr8	26599592	26599600	(118539036)	+	(TCCCCT)n	Simple_repeat	4	77	(0)	3833015
410	18.6	0.0	0.0	chr8	26599667	26599736	(118538900)	+	AluJo	SINE/Alu	233	302	(10)	3833016
1739	18.0	0.7	0.3	chr8	26655215	26655508	(118483128)	+	AluJr	SINE/Alu	1	295	(17)	3833117
13	8.1	3.9	0.0	chr8	26655587	26655612	(118483024)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3833118
582	21.0	12.0	9.6	chr8	27276968	27277268	(117861368)	C	L1ME4a	LINE/L1	(4678)	1818	1510	3834099
560	31.0	11.9	2.7	chr8	27277283	27277759	(117860877)	C	L1ME4a	LINE/L1	(5071)	1425	892	3834099
347	26.8	8.7	3.5	chr8	27315167	27315340	(117823296)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	3834169
214	30.9	2.1	0.0	chr8	27460510	27460582	(117678054)	C	L2c	LINE/L2	(38)	3349	3256	3834412
15	20.6	6.0	0.0	chr8	27490972	27491021	(117647615)	+	(CCTCTC)n	Simple_repeat	1	53	(0)	3834471
531	33.2	4.2	1.4	chr8	27584093	27584300	(117554336)	+	MIRb	SINE/MIR	14	227	(41)	3834618
36	21.5	1.1	2.1	chr8	27633799	27633893	(117504743)	+	GA-rich	Low_complexity	1	96	(0)	3834709
436	33.2	4.9	2.5	chr8	27639686	27639886	(117498750)	C	L2c	LINE/L2	(1172)	2247	2042	3834719
2098	12.2	0.7	0.0	chr8	28324582	28324875	(116813761)	+	AluSq	SINE/Alu	1	296	(17)	3835926
12	11.3	6.9	0.0	chr8	28329315	28329343	(116809293)	+	(CCTC)n	Simple_repeat	1	31	(0)	3835940
217	30.6	5.2	8.7	chr8	28384434	28384594	(116754042)	+	L2c	LINE/L2	3182	3336	(51)	3836022
17	10.7	0.0	0.0	chr8	28401816	28401845	(116736791)	+	(CCCT)n	Simple_repeat	1	30	(0)	3836060
66	17.8	6.0	4.8	chr8	28402203	28402437	(116736199)	+	GA-rich	Low_complexity	1	249	(0)	3836061
25	15.0	0.0	5.2	chr8	28441192	28441249	(116697387)	+	(CTC)n	Simple_repeat	1	58	(0)	3836160
362	26.0	19.7	3.4	chr8	28506262	28506468	(116632168)	+	MIRc	SINE/MIR	17	265	(3)	3836298
13	20.8	4.3	2.1	chr8	28702551	28702596	(116436040)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3836723
180	25.8	10.8	1.5	chr8	28709710	28709776	(116428860)	C	Tigger19b	DNA/TcMar-Tigger	(449)	101	28	3836734
14	14.9	3.2	0.0	chr8	29055361	29055391	(116083245)	+	(CTCC)n	Simple_repeat	1	32	(0)	3837293
350	25.2	5.7	1.0	chr8	29331225	29331324	(115807312)	+	LTR89	LTR/ERVL?	699	803	(76)	3837730
2269	6.4	0.0	5.1	chr8	29331436	29331757	(115806879)	C	AluY	SINE/Alu	(0)	311	1	3837731
577	29.2	6.2	2.4	chr8	29735014	29735262	(115403374)	C	MIR	SINE/MIR	(2)	260	2	3838433
16	5.3	0.0	0.0	chr8	29737563	29737582	(115401054)	+	(AC)n	Simple_repeat	1	20	(0)	3838437
14	11.6	0.0	3.3	chr8	30156267	30156296	(114982340)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3839161
615	21.4	6.0	0.8	chr8	30166814	30166939	(114971697)	+	FLAM_C	SINE/Alu	1	133	(10)	3839186
24	15.8	6.7	2.5	chr8	30384444	30384518	(114754118)	+	G-rich	Low_complexity	1	80	(0)	3839683
303	29.9	15.9	6.7	chr8	30812448	30812759	(114325877)	+	L1M4b	LINE/L1	207	552	(6315)	3840504
366	15.6	8.5	2.6	chr8	30866200	30866276	(114272360)	+	AluJb	SINE/Alu	219	300	(12)	3840589
48	6.4	10.5	3.6	chr8	30866280	30866403	(114272233)	+	G-rich	Low_complexity	1	137	(0)	3840590
28	6.0	0.0	0.0	chr8	32548858	32548892	(112589744)	+	(TCC)n	Simple_repeat	1	35	(0)	3843151
16	18.0	0.0	2.5	chr8	32548904	32548943	(112589693)	+	(CCTCCC)n	Simple_repeat	1	40	(0)	3843152
2269	13.1	0.0	0.0	chr8	33467958	33468269	(111670367)	+	AluSx1	SINE/Alu	1	312	(0)	3844551
19	14.9	0.0	0.0	chr8	36986105	36986135	(108152501)	+	(CT)n	Simple_repeat	1	31	(0)	3849667
13	11.9	0.0	6.2	chr8	37011831	37011862	(108126774)	+	(CCCT)n	Simple_repeat	1	32	(0)	3849704
18	32.6	1.1	4.2	chr8	37179806	37179900	(107958736)	+	(CTCCCCC)n	Simple_repeat	1	96	(0)	3849946
41	8.0	0.0	0.0	chr8	37179921	37179973	(107958663)	+	(CT)n	Simple_repeat	1	53	(0)	3849947
767	23.6	3.5	7.2	chr8	37395731	37395967	(107742669)	C	Tigger19a	DNA/TcMar-Tigger	(94)	229	2	3850248
216	28.3	1.9	17.8	chr8	37420997	37421125	(107717511)	C	L2c	LINE/L2	(0)	3387	3280	3850300
1621	19.7	6.6	3.7	chr8	37476898	37477250	(107661386)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	1	3850370
19	13.6	6.7	3.1	chr8	37477289	37477348	(107661288)	+	(TTCCTGC)n	Simple_repeat	1	64	(0)	3850371
13	30.4	1.8	0.0	chr8	37594194	37594249	(107544387)	+	(GCAGCCT)n	Simple_repeat	1	57	(0)	3850592
19	20.8	2.3	0.0	chr8	37594458	37594501	(107544135)	+	GA-rich	Low_complexity	1	45	(0)	3850593
325	26.6	6.9	0.0	chr8	37597633	37597726	(107540910)	+	MIR3	SINE/MIR	100	200	(8)	3850601
1944	12.1	4.1	0.0	chr8	37605260	37605539	(107533097)	+	AluJo	SINE/Alu	3	294	(18)	3850616
975	18.1	1.4	7.3	chr8	37605540	37605690	(107532946)	C	L1PB4	LINE/L1	(128)	6028	5882	3850615
38	11.2	0.0	0.0	chr8	37606480	37606539	(107532097)	+	(GAGA)n	Simple_repeat	1	60	(0)	3850620
243	37.6	6.2	3.2	chr8	37606540	37606726	(107531910)	C	L2c	LINE/L2	(452)	2967	2775	3850618
512	26.1	22.4	1.1	chr8	37606723	37606908	(107531728)	C	MIR	SINE/MIR	(20)	242	6	3850621
1968	14.3	1.0	1.6	chr8	37622088	37622401	(107516235)	C	AluJr	SINE/Alu	(0)	312	1	3850647
15	24.5	4.8	4.5	chr8	37674539	37674622	(107464014)	+	(TCCTC)n	Simple_repeat	1	88	(0)	3850760
17	19.9	4.3	0.0	chr8	37675862	37675908	(107462728)	+	(CTCT)n	Simple_repeat	1	49	(0)	3850761
923	10.2	0.0	0.0	chr8	37676156	37676273	(107462363)	C	FLAM_C	SINE/Alu	(24)	119	2	3850763
1666	17.1	1.0	2.3	chr8	37679940	37680238	(107458398)	+	AluJr	SINE/Alu	1	295	(17)	3850772
55	22.2	0.0	0.0	chr8	37680241	37680356	(107458280)	+	GA-rich	Low_complexity	1	116	(0)	3850773
14	17.4	11.9	0.0	chr8	37693542	37693600	(107445036)	+	(CTTCT)n	Simple_repeat	1	66	(0)	3850800
14	35.1	2.1	2.1	chr8	37693627	37693720	(107444916)	+	(CCTCTCC)n	Simple_repeat	1	96	(0)	3850801
13	18.8	2.6	2.6	chr8	37695584	37695621	(107443015)	+	(GCG)n	Simple_repeat	1	39	(0)	3850803
13	22.2	5.6	1.8	chr8	37698686	37698739	(107439897)	+	(CCTCACC)n	Simple_repeat	1	57	(0)	3850809
16	3.7	7.1	0.0	chr8	37716717	37716744	(107421892)	+	(GAG)n	Simple_repeat	1	30	(0)	3850843
15	10.4	6.1	2.9	chr8	37782283	37782315	(107356321)	+	GA-rich	Low_complexity	1	35	(0)	3850958
12	13.2	5.7	2.7	chr8	37789240	37789274	(107349362)	+	GA-rich	Low_complexity	1	37	(0)	3850972
479	30.9	4.6	9.4	chr8	37789379	37789591	(107349045)	+	L2c	LINE/L2	3066	3273	(114)	3850973
221	33.8	0.0	2.5	chr8	37822045	37822123	(107316513)	+	L2c	LINE/L2	3304	3380	(7)	3851042
2102	10.0	3.5	0.4	chr8	37889793	37890071	(107248565)	C	AluSx1	SINE/Alu	(11)	301	14	3851152
2037	15.0	0.0	1.0	chr8	37903052	37903357	(107235279)	+	AluJo	SINE/Alu	5	307	(5)	3851179
1666	17.2	4.6	0.3	chr8	38032233	38032522	(107106114)	+	AluJr	SINE/Alu	3	305	(7)	3851488
1364	16.4	0.0	4.0	chr8	38080964	38081076	(107057560)	C	AluJb	SINE/Alu	(179)	133	29	3851613
4110	15.1	2.6	3.5	chr8	38081124	38081815	(107056821)	+	LTR39	LTR/ERV1	24	709	(74)	3851615
265	27.3	3.4	9.8	chr8	38177643	38177781	(106960855)	C	MIRb	SINE/MIR	(36)	232	95	3851806
14	38.9	2.1	2.1	chr8	38345183	38345275	(106793361)	+	A-rich	Low_complexity	1	95	(0)	3852121
13	13.1	2.7	5.3	chr8	38381285	38381321	(106757315)	+	(TTCC)n	Simple_repeat	1	38	(0)	3852192
16	3.6	6.9	0.0	chr8	38452020	38452048	(106686588)	+	(GAGGGA)n	Simple_repeat	1	31	(0)	3852306
62	3.3	0.0	0.0	chr8	38452185	38452246	(106686390)	+	(AC)n	Simple_repeat	1	62	(0)	3852307
16	20.9	3.9	1.9	chr8	38565557	38565608	(106573028)	+	(CCTT)n	Simple_repeat	1	54	(0)	3852539
236	32.5	12.8	3.1	chr8	38565648	38565809	(106572827)	C	MamTip2	DNA/hAT-Tip100	(81)	224	45	3852540
14	29.8	5.7	1.1	chr8	38625981	38625991	(106512645)	+	(CTCTC)n	Simple_repeat	1	28	(65)	3852660
13	17.4	7.3	3.4	chr8	38625992	38626046	(106512590)	+	(TCCCCAC)n	Simple_repeat	1	59	(0)	3852661
14	29.8	5.7	1.1	chr8	38626047	38626068	(106512568)	+	(CTCTC)n	Simple_repeat	29	93	(0)	3852660
13	14.2	3.2	0.0	chr8	38785127	38785157	(106353479)	+	G-rich	Low_complexity	1	32	(0)	3852976
2386	7.1	0.0	1.9	chr8	38954746	38955053	(106183583)	+	AluSq	SINE/Alu	1	302	(11)	3853271
922	9.3	2.4	4.1	chr8	38955062	38955230	(106183406)	C	L1PB2	LINE/L1	(1)	6150	5985	3853272
1185	3.5	0.0	0.0	chr8	41633840	41633983	(103504653)	+	L1PA8	LINE/L1	6009	6152	(20)	3857353
69	25.7	6.2	2.9	chr8	42269350	42269677	(102868959)	+	A-rich	Low_complexity	1	338	(0)	3858484
25	14.7	7.3	0.0	chr8	42269631	42269685	(102868951)	+	GA-rich	Low_complexity	1	59	(0)	3858485
188	14.0	19.4	2.0	chr8	42269781	42269831	(102868805)	C	MIRb	SINE/MIR	(36)	232	171	3858486
14	9.0	5.1	4.9	chr8	42381183	42381221	(102757415)	+	(GGAGTG)n	Simple_repeat	1	41	(0)	3858690
658	28.1	6.7	0.0	chr8	42473284	42473600	(102665036)	+	L2a	LINE/L2	2858	3199	(227)	3858849
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
22	12.6	7.5	0.0	chr8	47206242	47206294	(97932342)	+	(ACATGC)n	Simple_repeat	1	57	(0)	3861592
1268	19.0	0.0	4.1	chr8	51902454	51902674	(93235962)	+	AluJr	SINE/Alu	1	212	(100)	3867397
12	13.7	2.0	10.0	chr8	54021999	54022047	(91116589)	+	(CGGCC)n	Simple_repeat	1	50	(0)	3870335
14	25.6	0.0	7.2	chr8	55101909	55101977	(90036659)	+	(CCCCCG)n	Simple_repeat	1	69	(0)	3871975
13	16.2	0.0	5.3	chr8	58035860	58035897	(87102739)	+	(TTCCCCC)n	Simple_repeat	1	38	(0)	3876091
241	35.7	5.5	1.9	chr8	60576979	60577035	(84561601)	C	L3	LINE/CR1	(286)	3813	3753	3879416
184	34.9	4.2	5.0	chr8	60653539	60653921	(84484715)	+	L2	LINE/L2	2702	3081	(338)	3879550
91	14.5	2.2	2.1	chr8	60759369	60759552	(84379084)	+	(CTCTCC)n	Simple_repeat	1	188	(0)	3879703
22	18.2	2.6	6.3	chr8	60909007	60909083	(84229553)	+	(CTCC)n	Simple_repeat	1	79	(0)	3879872
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
593	33.5	5.0	4.8	chr8	66780367	66780953	(78357683)	C	L2c	LINE/L2	(95)	3292	2692	3888090
35	0.0	0.0	0.0	chr8	70403848	70403879	(74734757)	+	(CCT)n	Simple_repeat	1	32	(0)	3893736
709	17.9	3.7	0.6	chr8	70745467	70745623	(74393013)	C	MER5A	DNA/hAT-Charlie	(1)	188	27	3894312
26	0.0	0.0	0.0	chr8	71362156	71362180	(73776456)	+	(T)n	Simple_repeat	1	25	(0)	3895128
7433	13.5	5.3	2.2	chr8	73011568	73012388	(72126248)	C	Tigger1	DNA/TcMar-Tigger	(1450)	968	111	3897257
182	30.9	9.3	9.8	chr8	73356735	73356949	(71781687)	+	L2b	LINE/L2	3139	3352	(23)	3897849
27	29.3	0.0	5.7	chr8	74321412	74321535	(70817101)	+	(CGC)n	Simple_repeat	1	124	(0)	3899515
24	14.4	4.3	0.0	chr8	76681172	76681218	(68457418)	+	(CT)n	Simple_repeat	1	49	(0)	3902546
14	18.0	2.0	5.9	chr8	79767523	79767572	(65371064)	+	(CTCCG)n	Simple_repeat	1	51	(0)	3906479
17	10.3	0.0	3.0	chr8	79767998	79768030	(65370606)	+	(CCCCGC)n	Simple_repeat	1	33	(0)	3906480
906	24.8	12.4	4.8	chr8	80110619	80110923	(65027713)	+	MER57E1	LTR/ERV1	5	335	(37)	3907037
2051	17.0	0.0	1.9	chr8	80110924	80111240	(65027396)	+	AluJr	SINE/Alu	1	311	(1)	3907039
622	23.2	6.8	3.0	chr8	80610522	80610690	(64527946)	+	MER45A	DNA/hAT-Tip100	1	176	(2)	3908130
20	33.3	4.2	0.0	chr8	80610763	80610804	(64527832)	+	(TCTC)n	Simple_repeat	1	94	(0)	3908131
18	19.4	4.2	0.0	chr8	80610805	80610852	(64527784)	+	(CCCTC)n	Simple_repeat	1	50	(0)	3908132
97	27.3	2.4	2.0	chr8	80838565	80838901	(64299735)	+	GA-rich	Low_complexity	1	345	(0)	3908436
230	24.6	8.1	0.0	chr8	81297500	81297556	(63841080)	C	L2c	LINE/L2	(70)	3317	3256	3909084
24	25.0	2.1	4.2	chr8	84183290	84183382	(60955254)	+	(CGC)n	Simple_repeat	1	95	(0)	3912803
16	21.4	0.0	2.2	chr8	85464523	85464567	(59674069)	+	(CTCCC)n	Simple_repeat	1	45	(0)	3914611
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
19	0.0	0.0	0.0	chr8	88327748	88327764	(56810872)	+	(GC)n	Simple_repeat	1	17	(0)	3918473
41	5.7	1.8	1.7	chr8	88327765	88327821	(56810815)	+	(CA)n	Simple_repeat	1	58	(0)	3918474
25	30.0	0.0	2.1	chr8	91040900	91040992	(54097644)	+	GA-rich	Low_complexity	1	93	(0)	3921972
776	22.9	6.6	3.4	chr8	91302546	91302857	(53835779)	C	L1ME1	LINE/L1	(1)	6178	5870	3922358
12	14.1	3.0	2.9	chr8	92095469	92095501	(53043135)	+	(GTGA)n	Simple_repeat	1	34	(0)	3923409
31	23.9	2.3	5.3	chr8	92095573	92095704	(53042932)	+	G-rich	Low_complexity	1	128	(0)	3923410
15	24.9	0.0	0.0	chr8	93916808	93916850	(51221786)	+	(CCGCCC)n	Simple_repeat	1	43	(0)	3926055
14	17.8	5.3	0.0	chr8	93917771	93917808	(51220828)	+	(CGC)n	Simple_repeat	1	40	(0)	3926057
24	8.5	5.6	3.5	chr8	94948744	94948797	(50189839)	+	GA-rich	Low_complexity	1	57	(0)	3927878
22	26.5	3.2	3.1	chr8	96493672	96493766	(48644870)	+	GA-rich	Low_complexity	1	98	(0)	3930399
72	18.7	1.3	1.9	chr8	97736304	97736461	(47402175)	+	GA-rich	Low_complexity	1	160	(0)	3932291
424	30.3	4.3	1.3	chr8	97736531	97736679	(47401957)	C	MIRc	SINE/MIR	(55)	153	7	3932292
87	17.4	5.7	3.9	chr8	97994031	97994294	(47144342)	+	GA-rich	Low_complexity	1	279	(0)	3932885
16	19.0	4.5	5.7	chr8	98825936	98826002	(46312634)	+	(GGCG)n	Simple_repeat	1	70	(0)	3934229
29	23.9	1.9	3.7	chr8	98826003	98826021	(46312615)	+	(GGCCGG)n	Simple_repeat	51	107	(0)	3934228
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
12	12.6	0.0	3.6	chr8	100951316	100951343	(44187293)	+	(CCCCG)n	Simple_repeat	1	28	(0)	3937832
13	24.0	0.0	2.4	chr8	100953004	100953044	(44185592)	+	(GCCGG)n	Simple_repeat	1	41	(0)	3937837
398	27.2	12.8	0.0	chr8	100986269	100986459	(44152177)	C	L2a	LINE/L2	(25)	3401	3183	3937918
12	25.6	2.1	2.0	chr8	101080919	101080966	(44057670)	+	(CCTCCC)n	Simple_repeat	1	49	(0)	3938108
313	31.4	8.2	8.2	chr8	101301073	101301342	(43837294)	+	L2b	LINE/L2	3106	3375	(0)	3938507
13	9.7	0.0	0.0	chr8	102411516	102411537	(42727099)	+	(TAA)n	Simple_repeat	1	22	(0)	3940260
14	23.2	3.9	1.9	chr8	102411542	102411593	(42727043)	+	(CTCC)n	Simple_repeat	1	54	(0)	3940261
12	0.0	0.0	5.0	chr8	102412758	102412777	(42725859)	+	(GGA)n	Simple_repeat	1	20	(0)	3940263
12	32.5	0.0	6.3	chr8	102653750	102653828	(42484808)	+	GA-rich	Low_complexity	1	79	(0)	3940819
13	23.3	4.5	4.3	chr8	102653794	102653859	(42484777)	+	G-rich	Low_complexity	1	69	(0)	3940820
18	19.6	1.8	3.5	chr8	102653859	102653914	(42484722)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	3940821
13	19.6	0.0	6.5	chr8	102654068	102654080	(42484556)	+	(GGCGG)n	Simple_repeat	1	45	(0)	3940822
14	13.7	3.1	0.0	chr8	102654081	102654112	(42484524)	+	G-rich	Low_complexity	1	33	(0)	3940823
15	17.7	2.5	2.4	chr8	102655235	102655274	(42483362)	+	(CCT)n	Simple_repeat	1	41	(0)	3940826
13	21.2	2.1	4.2	chr8	102655686	102655732	(42482904)	+	(CGC)n	Simple_repeat	1	48	(0)	3940827
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
21	22.1	0.0	1.8	chr8	102655972	102656027	(42482609)	+	(CGCCCCC)n	Simple_repeat	1	56	(0)	3940829
12	12.0	3.7	0.0	chr8	102656127	102656153	(42482483)	+	(CCGCT)n	Simple_repeat	1	28	(0)	3940830
345	32.1	7.1	4.1	chr8	102807682	102807942	(42330694)	C	L2b	LINE/L2	(179)	3208	2927	3941147
14	12.2	0.0	0.0	chr8	102961505	102961531	(42177105)	+	(CCTCC)n	Simple_repeat	1	27	(0)	3941477
23	30.6	3.5	1.7	chr8	103499883	103499997	(41638639)	+	(GGC)n	Simple_repeat	1	119	(0)	3942425
13	21.9	2.3	2.2	chr8	103500684	103500727	(41637909)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	3942426
13	19.6	2.9	0.0	chr8	103500804	103500838	(41637798)	+	(GCC)n	Simple_repeat	1	36	(0)	3942427
15	11.1	0.0	3.2	chr8	106657558	106657588	(38481048)	+	(GCGGG)n	Simple_repeat	1	31	(0)	3946882
227	35.2	8.6	3.0	chr8	108042831	108042994	(37095642)	+	MIRb	SINE/MIR	38	211	(57)	3948786
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
14	9.6	0.0	0.0	chr8	109644792	109644814	(35493822)	+	(CGC)n	Simple_repeat	1	23	(0)	3951139
22	18.8	5.1	3.6	chr8	115668447	115668525	(29470111)	+	(CGCGCCC)n	Simple_repeat	1	83	(0)	3958965
31	3.3	0.0	0.0	chr8	115668718	115668748	(29469888)	+	(AG)n	Simple_repeat	1	31	(0)	3958966
15	20.6	0.0	2.4	chr8	116874649	116874689	(28263947)	+	G-rich	Low_complexity	1	41	(0)	3960760
210	25.0	8.0	2.8	chr8	117957509	117957610	(27181026)	+	MIR3	SINE/MIR	39	156	(112)	3962437
93	21.6	1.1	0.0	chr8	119070438	119070628	(26068008)	+	(TC)n	Simple_repeat	1	193	(0)	3964301
12	34.4	2.1	4.1	chr8	119415834	119415929	(25722707)	+	(TCCC)n	Simple_repeat	1	98	(0)	3964786
11	24.5	4.9	3.1	chr8	119856107	119856167	(25282469)	+	(GATCCCC)n	Simple_repeat	1	64	(0)	3965498
279	29.9	11.2	2.8	chr8	119856225	119856403	(25282233)	C	MIRb	SINE/MIR	(35)	233	38	3965499
11	24.2	5.5	1.7	chr8	120125125	120125179	(25013457)	+	(CAGCGG)n	Simple_repeat	1	58	(0)	3966127
18	8.7	0.0	0.0	chr8	120125183	120125207	(25013429)	+	(GA)n	Simple_repeat	1	25	(0)	3966128
247	32.7	9.2	5.0	chr8	120153860	120154097	(24984539)	C	MLT1K	LTR/ERVL-MaLR	(346)	249	1	3966180
25	18.1	3.1	1.5	chr8	120811778	120811841	(24326795)	+	(CCG)n	Simple_repeat	1	66	(0)	3967216
21	14.7	0.0	0.0	chr8	122783046	122783083	(22355553)	+	(GGA)n	Simple_repeat	1	38	(0)	3970519
1946	16.9	0.0	0.7	chr8	123012147	123012447	(22126189)	+	AluSx3	SINE/Alu	1	299	(12)	3970990
28	14.6	0.0	3.5	chr8	123012453	123012510	(22126126)	+	G-rich	Low_complexity	1	58	(0)	3970991
22	10.8	0.0	0.0	chr8	123158008	123158038	(21980598)	+	(T)n	Simple_repeat	1	31	(0)	3971279
12	21.1	2.9	0.0	chr8	123158108	123158141	(21980495)	+	(CTCCC)n	Simple_repeat	1	35	(0)	3971280
307	29.8	3.4	5.4	chr8	125172483	125172631	(19966005)	C	MLT1A0-int	LTR/ERVL-MaLR	(27)	1360	1215	3975048
2011	29.8	9.3	5.2	chr8	125172673	125173696	(19964940)	C	ERVL-E-int	LTR/ERVL	(309)	5358	4291	3975057
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
13	20.5	5.8	1.8	chr8	127735917	127735968	(17402668)	+	(TCCCC)n	Simple_repeat	1	55	(0)	3979957
80	19.6	3.1	3.8	chr8	127812578	127812735	(17325901)	+	GA-rich	Low_complexity	74	226	(0)	3980156
500	22.8	8.7	3.5	chr8	129985922	129986094	(15152542)	C	MamRep38	DNA/hAT	(24)	271	89	3984107
387	33.7	3.2	1.1	chr8	132055494	132055676	(13082960)	+	Tigger8	DNA/TcMar-Tigger	11	197	(470)	3987828
18	13.5	2.2	4.3	chr8	133571802	133571846	(11566790)	+	(CCT)n	Simple_repeat	1	46	(0)	3990738
341	34.1	14.9	1.2	chr8	133645816	133646064	(11492572)	C	L2c	LINE/L2	(176)	3211	2923	3990916
235	17.5	0.0	8.1	chr8	133885670	133885731	(11252905)	+	L1MC5	LINE/L1	8887	8943	(361)	3991376
90	18.3	5.1	0.9	chr8	133885741	133885957	(11252679)	+	GA-rich	Low_complexity	1	228	(0)	3991377
11	18.1	2.4	4.8	chr8	134713228	134713268	(10425368)	+	(TCCGGAG)n	Simple_repeat	1	42	(0)	3992734
207	31.1	2.8	1.0	chr8	135472841	135472944	(9665692)	C	L2	LINE/L2	(1121)	2298	2193	3994078
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
213	23.5	0.0	3.8	chr8	140458276	140458328	(4680308)	+	L2b	LINE/L2	3099	3149	(226)	4001985
51	13.3	1.2	0.0	chr8	140522667	140522749	(4615887)	+	(AG)n	Simple_repeat	1	84	(0)	4002134
1459	20.7	14.1	1.0	chr8	141035014	141035418	(4103218)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	4003042
324	29.8	12.4	4.5	chr8	141035557	141035844	(4102792)	+	L2c	LINE/L2	3003	3316	(71)	4003043
297	26.0	0.0	0.0	chr8	141059426	141059502	(4079134)	+	MIRc	SINE/MIR	83	159	(109)	4003097
36	0.0	0.0	0.0	chr8	141073484	141073514	(4065122)	+	(GA)n	Simple_repeat	1	31	(0)	4003131
24	0.0	0.0	0.0	chr8	141073515	141073540	(4065096)	+	(TG)n	Simple_repeat	1	26	(0)	4003132
358	28.6	2.8	0.0	chr8	141101536	141101640	(4036996)	+	MER81	DNA/hAT-Blackjack	2	109	(5)	4003185
454	19.2	3.9	0.8	chr8	141101663	141101788	(4036848)	+	LTR16C	LTR/ERVL	358	487	(2)	4003184
248	27.5	3.6	3.6	chr8	141101799	141101881	(4036755)	+	MIRc	SINE/MIR	160	242	(26)	4003186
13	11.6	0.0	6.2	chr8	141129009	141129040	(4009596)	+	(CTCCC)n	Simple_repeat	1	32	(0)	4003238
12	28.7	0.0	0.0	chr8	142449357	142449398	(2689238)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	4004913
26	9.9	0.0	2.2	chr8	142449533	142449577	(2689059)	+	(CCT)n	Simple_repeat	1	45	(0)	4004914
55	12.7	1.0	1.0	chr8	142510054	142510149	(2628487)	+	(AGG)n	Simple_repeat	1	97	(0)	4004988
18	27.9	7.0	0.0	chr8	142615396	142615481	(2523155)	+	GA-rich	Low_complexity	1	92	(0)	4005102
1518	16.4	5.4	0.3	chr8	142992528	142992845	(2145791)	+	LTR56	LTR/ERV1	1	335	(110)	4005557
12	31.8	1.7	1.6	chr8	143952948	143953007	(1185629)	+	(CCCGC)n	Simple_repeat	1	61	(0)	4006871
353	31.2	16.4	2.8	chr8	144079155	144079438	(1059198)	+	L2a	LINE/L2	3097	3426	(0)	4007076
16	23.0	2.7	5.3	chr8	144291884	144291956	(846680)	+	G-rich	Low_complexity	1	75	(0)	4007413
13	13.1	0.0	0.0	chr8	144334302	144334327	(804309)	+	(GGGAG)n	Simple_repeat	1	26	(0)	4007461
12	11.9	0.0	6.5	chr8	144334462	144334492	(804144)	+	(CTCC)n	Simple_repeat	1	31	(0)	4007462
361	30.4	5.5	3.5	chr8	144342917	144343051	(795585)	C	L1ME2	LINE/L1	(7)	6157	6019	4007479
13	30.2	0.0	0.0	chr8	144467711	144467755	(670881)	+	(CAG)n	Simple_repeat	1	45	(0)	4007646
14	22.1	0.0	4.3	chr8	144475888	144475933	(662703)	+	G-rich	Low_complexity	1	46	(0)	4007649
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
33	25.6	4.6	3.1	chr8	144827216	144827367	(311269)	+	(CCCGGC)n	Simple_repeat	1	159	(0)	4008164
194	29.1	14.0	1.9	chr8	145051640	145051846	(86790)	+	L2	LINE/L2	2665	2900	(519)	4008471
13	23.1	3.7	3.6	chr9	2015450	2015503	(136379214)	+	(GCC)n	Simple_repeat	1	56	(0)	4011561
12	23.4	4.6	4.4	chr9	2621834	2621898	(135772819)	+	(CTCTCCG)n	Simple_repeat	1	68	(0)	4012376
25	24.1	4.8	0.0	chr9	2621899	2621913	(135772804)	+	(CTCCT)n	Simple_repeat	4	87	(0)	4012377
13	22.0	9.3	3.2	chr9	2622027	2622112	(135772605)	+	(CCTCCTT)n	Simple_repeat	1	94	(0)	4012378
12	12.2	3.7	0.0	chr9	2622384	2622410	(135772307)	+	(TCCCC)n	Simple_repeat	1	28	(0)	4012380
31	12.9	3.4	0.0	chr9	3525764	3525843	(134868874)	+	GA-rich	Low_complexity	1	82	(0)	4013734
34	9.2	0.0	0.0	chr9	3525927	3526019	(134868698)	+	(AG)n	Simple_repeat	1	93	(0)	4013735
18	16.8	4.2	6.8	chr9	4542147	4542217	(133852500)	+	GA-rich	Low_complexity	1	74	(0)	4015222
14	21.1	3.3	4.8	chr9	4662147	4662206	(133732511)	+	(TCACC)n	Simple_repeat	1	62	(0)	4015435
15	12.4	2.7	2.6	chr9	4741857	4741893	(133652824)	+	(CTTCCTC)n	Simple_repeat	1	38	(0)	4015576
12	0.0	0.0	5.0	chr9	4741875	4741894	(133652823)	+	(CCT)n	Simple_repeat	1	20	(0)	4015577
13	26.4	3.2	3.1	chr9	5628961	5629022	(132765695)	+	(GCGCG)n	Simple_repeat	1	64	(0)	4016814
17	14.2	0.0	0.0	chr9	5629194	5629224	(132765493)	+	(GCC)n	Simple_repeat	1	31	(0)	4016815
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
1421	18.1	0.8	0.0	chr9	6543050	6543287	(131851430)	+	AluJr	SINE/Alu	56	295	(17)	4018195
24	17.2	1.4	5.7	chr9	6646288	6646372	(131748345)	+	(TCCTCC)n	Simple_repeat	1	81	(0)	4018394
1922	13.8	2.0	0.0	chr9	6646386	6646676	(131748041)	+	AluJb	SINE/Alu	8	304	(8)	4018395
19	16.0	6.9	1.6	chr9	7265313	7265372	(131129345)	+	(TCCCTT)n	Simple_repeat	1	63	(0)	4019478
507	30.2	8.9	3.8	chr9	7265397	7265716	(131129001)	+	Charlie16a	DNA/hAT-Charlie	5	342	(0)	4019479
24	13.2	1.9	3.6	chr9	8857916	8857969	(129536748)	+	(CCT)n	Simple_repeat	1	55	(0)	4021667
11	22.9	1.7	6.8	chr9	8858018	8858075	(129536642)	+	(CTCCCG)n	Simple_repeat	1	59	(0)	4021668
34	5.3	0.0	0.0	chr9	8858086	8858125	(129536592)	+	(CTC)n	Simple_repeat	1	40	(0)	4021669
14	24.8	0.0	2.2	chr9	8858177	8858222	(129536495)	+	(CTTTCCT)n	Simple_repeat	1	46	(0)	4021670
1922	17.0	4.4	2.0	chr9	14152773	14153169	(124241548)	+	L1MA4	LINE/L1	5883	6289	(11)	4028588
617	22.2	6.4	2.4	chr9	14214280	14214445	(124180272)	+	MER45A	DNA/hAT-Tip100	1	173	(5)	4028662
20	18.6	4.0	5.1	chr9	14271164	14271238	(124123479)	+	(CCTCTC)n	Simple_repeat	1	78	(0)	4028742
21	10.3	2.2	4.3	chr9	14301560	14301605	(124093112)	+	(TCCC)n	Simple_repeat	1	47	(0)	4028776
21	25.9	2.8	1.4	chr9	14314680	14314751	(124079966)	+	(CCT)n	Simple_repeat	1	74	(0)	4028786
17	20.5	3.8	1.8	chr9	14315509	14315561	(124079156)	+	(GGCGG)n	Simple_repeat	1	55	(0)	4028787
17	25.3	0.0	4.8	chr9	14315562	14315567	(124079150)	+	(GCGG)n	Simple_repeat	4	62	(0)	4028788
18	4.5	0.0	0.0	chr9	14316673	14316695	(124078022)	+	(AC)n	Simple_repeat	1	23	(0)	4028789
16	22.0	0.0	6.7	chr9	15510372	15510431	(122884286)	+	G-rich	Low_complexity	1	60	(0)	4030657
14	13.7	3.1	0.0	chr9	15511251	15511282	(122883435)	+	(TGTGTA)n	Simple_repeat	1	33	(0)	4030659
26	13.7	0.0	2.0	chr9	15513156	15513206	(122881511)	+	G-rich	Low_complexity	1	51	(0)	4030661
31	15.4	7.1	2.2	chr9	18425131	18425214	(119969503)	+	(TC)n	Simple_repeat	1	90	(0)	4034653
238	25.0	7.1	0.0	chr9	18994667	18994770	(119399947)	+	MIR3	SINE/MIR	91	202	(6)	4035367
16	15.8	2.2	4.3	chr9	19408910	19408955	(118985762)	+	(AGGCG)n	Simple_repeat	1	47	(0)	4036276
49	0.0	0.0	0.0	chr9	20620253	20620294	(117774423)	+	(AC)n	Simple_repeat	1	42	(0)	4038135
16	13.9	2.3	4.5	chr9	20622066	20622108	(117772609)	+	G-rich	Low_complexity	1	44	(0)	4038137
15	23.5	2.2	0.0	chr9	20625015	20625059	(117769658)	+	A-rich	Low_complexity	1	46	(0)	4038142
22	17.8	5.3	0.0	chr9	20735450	20735511	(117659206)	+	(TTCC)n	Simple_repeat	1	65	(0)	4038363
1690	19.7	1.0	2.6	chr9	20735514	20735823	(117658894)	C	AluJr4	SINE/Alu	(7)	305	1	4038364
13	29.4	1.3	5.3	chr9	21335468	21335551	(117059166)	+	G-rich	Low_complexity	1	80	(0)	4039097
32	22.9	2.1	2.1	chr9	21559832	21559926	(116834791)	+	(GCC)n	Simple_repeat	1	97	(0)	4039359
281	26.8	8.5	1.0	chr9	21802343	21802440	(116592277)	+	MIRb	SINE/MIR	163	268	(0)	4039722
16	13.1	0.0	0.0	chr9	21802470	21802494	(116592223)	+	(A)n	Simple_repeat	1	25	(0)	4039727
14	20.8	1.2	10.8	chr9	21974812	21974893	(116419824)	+	(CCG)n	Simple_repeat	1	83	(0)	4039935
1990	13.9	1.9	1.3	chr9	22032932	22033237	(116361480)	+	MER1B	DNA/hAT-Charlie	32	339	(0)	4040014
2069	13.1	10.1	2.0	chr9	23721619	23722016	(114672701)	+	Tigger2a	DNA/TcMar-Tigger	1	434	(0)	4042229
392	30.9	14.5	2.0	chr9	23736309	23736617	(114658100)	C	L2a	LINE/L2	(34)	3392	3056	4042246
622	25.4	5.1	4.2	chr9	26656289	26656502	(111738215)	+	MamRep564	Unknown	100	315	(42)	4045940
12	9.5	0.0	4.0	chr9	26956532	26956556	(111438161)	+	(TCCC)n	Simple_repeat	1	25	(0)	4046414
13	11.2	0.0	6.1	chr9	27470732	27470764	(110923953)	+	(CCTTCC)n	Simple_repeat	1	33	(0)	4047207
16	0.0	0.0	0.0	chr9	32552175	32552192	(105842525)	+	(A)n	Simple_repeat	1	18	(0)	4053836
268	24.7	13.1	5.8	chr9	33166120	33166274	(105228443)	C	MIRb	SINE/MIR	(8)	260	93	4054860
16	28.3	0.0	3.2	chr9	33167352	33167414	(105227303)	+	(GAGGCG)n	Simple_repeat	1	63	(0)	4054861
14	25.2	4.2	0.0	chr9	33212249	33212296	(105182421)	+	GA-rich	Low_complexity	1	50	(0)	4054968
1530	15.1	8.3	0.7	chr9	33290031	33290308	(105104409)	+	AluJr	SINE/Alu	2	302	(10)	4055139
30	0.0	0.0	0.0	chr9	33677010	33677037	(104717680)	+	(GCC)n	Simple_repeat	1	28	(0)	4055807
15	12.0	0.0	0.0	chr9	33677312	33677338	(104717379)	+	(CGC)n	Simple_repeat	1	27	(0)	4055808
9916	13.5	2.2	2.3	chr9	33778709	33779586	(104615131)	+	L1PA16	LINE/L1	940	1801	(4702)	4055972
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
13	25.3	6.0	1.4	chr9	33817376	33817399	(104577318)	+	(CCCCCT)n	Simple_repeat	1	69	(0)	4056032
13	20.4	2.4	2.4	chr9	33817400	33817440	(104577277)	+	(CCT)n	Simple_repeat	1	42	(0)	4056033
28	14.3	3.1	3.0	chr9	34589652	34589716	(103805001)	+	(CCG)n	Simple_repeat	1	67	(0)	4057643
20	18.9	2.1	0.0	chr9	34589754	34589801	(103804916)	+	(CCCT)n	Simple_repeat	1	49	(0)	4057644
20	15.9	0.0	2.3	chr9	34654411	34654454	(103740263)	+	(TCCCC)n	Simple_repeat	1	44	(0)	4057748
20	6.9	0.0	0.0	chr9	35072557	35072587	(103322130)	+	(GGCAGC)n	Simple_repeat	1	31	(0)	4058317
17	8.8	5.3	2.5	chr9	35111306	35111363	(103283354)	+	(TCCCG)n	Simple_repeat	1	59	(0)	4058364
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
14	21.5	2.2	2.2	chr9	35690926	35690970	(102703747)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	4059303
292	28.8	7.0	14.5	chr9	35945808	35946055	(102448662)	C	LTR50	LTR/ERVL	(567)	228	1	4059675
6296	12.1	2.4	1.4	chr9	36570811	36571413	(101823304)	+	Tigger1	DNA/TcMar-Tigger	1589	2200	(218)	4060998
392	14.5	0.0	0.0	chr9	36571414	36571475	(101823242)	+	MER57B2	LTR/ERV1	1	62	(341)	4061000
36	25.5	0.9	3.5	chr9	36571477	36571588	(101823129)	+	(TTTCC)n	Simple_repeat	1	113	(0)	4061001
2014	12.5	0.7	3.2	chr9	36571597	36571907	(101822810)	C	AluSz	SINE/Alu	(9)	303	1	4061002
15	0.0	0.0	0.0	chr9	36759386	36759402	(101635315)	+	(GT)n	Simple_repeat	1	17	(0)	4061402
441	30.9	3.3	2.4	chr9	36891602	36891810	(101502907)	+	MamRep434	DNA/TcMar-Tigger	191	401	(25)	4061646
181	31.6	7.0	7.6	chr9	36897567	36897710	(101497007)	C	MIR3	SINE/MIR	(63)	145	3	4061661
554	28.1	1.3	1.6	chr9	36901727	36901914	(101492803)	+	MIRc	SINE/MIR	64	255	(13)	4061669
318	27.8	12.9	7.8	chr9	37415476	37415666	(100979051)	C	L2a	LINE/L2	(0)	3426	3225	4062622
347	14.9	2.6	0.0	chr9	38048208	38048281	(100346436)	C	L1ME4a	LINE/L1	(93)	6031	5956	4063838
523	29.6	10.5	4.2	chr9	38211812	38212097	(100182620)	C	L1ME4a	LINE/L1	(263)	5861	5556	4064163
191	33.3	4.4	1.5	chr9	38212206	38212336	(100182381)	+	MIRc	SINE/MIR	91	225	(43)	4064165
16	21.7	0.0	0.0	chr9	38227060	38227091	(100167626)	+	G-rich	Low_complexity	1	32	(0)	4064196
14	17.1	11.9	0.0	chr9	68705180	68705238	(69689479)	+	(GGCAGCC)n	Simple_repeat	1	66	(0)	4080300
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
571	32.9	7.7	8.6	chr9	69170558	69171431	(69223286)	+	L2b	LINE/L2	1942	2807	(612)	4081164
188	26.4	15.5	1.8	chr9	69175135	69175300	(69219417)	+	LFSINE_Vert	SINE/tRNA	6	198	(261)	4081174
16	9.6	0.0	0.0	chr9	70406878	70406900	(67987817)	+	(AG)n	Simple_repeat	1	23	(0)	4083092
814	36.4	3.3	3.8	chr9	70406909	70407299	(67987418)	+	X9_LINE	LINE/L1	296	684	(252)	4083093
26	0.0	0.0	0.0	chr9	70412187	70412214	(67982503)	+	(A)n	Simple_repeat	1	28	(0)	4083101
14	8.1	0.0	3.6	chr9	70412567	70412594	(67982123)	+	(GGGGC)n	Simple_repeat	1	28	(0)	4083102
12	11.1	3.2	3.1	chr9	70420323	70420353	(67974364)	+	(CCCGCG)n	Simple_repeat	1	32	(0)	4083114
14	22.6	5.1	4.8	chr9	71910514	71910592	(66484125)	+	(CGCTCCC)n	Simple_repeat	1	83	(0)	4085497
22	22.6	1.6	3.2	chr9	74497316	74497376	(63897341)	+	(CT)n	Simple_repeat	1	62	(0)	4089478
12	15.8	0.0	3.3	chr9	75890707	75890736	(62503981)	+	(GAGC)n	Simple_repeat	1	30	(0)	4091628
25	15.0	0.0	3.6	chr9	76592711	76592766	(61801951)	+	(TTTTC)n	Simple_repeat	1	56	(0)	4092856
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
238	31.1	1.9	3.6	chr9	78296325	78296434	(60098283)	C	MIR3	SINE/MIR	(6)	202	95	4095558
604	24.4	5.5	6.0	chr9	79584453	79584635	(58810082)	+	L2a	LINE/L2	3245	3426	(0)	4097460
13	21.6	8.2	2.5	chr9	81689772	81689844	(56704873)	+	(TCTCC)n	Simple_repeat	1	79	(0)	4100306
310	31.0	4.2	7.1	chr9	82961405	82961574	(55433143)	C	MER131	DNA?	(50)	165	1	4102186
16	23.3	1.3	7.7	chr9	83622940	83623016	(54771701)	+	G-rich	Low_complexity	1	78	(0)	4103205
1633	16.2	5.7	0.3	chr9	83937085	83937368	(54457349)	+	AluJr4	SINE/Alu	13	312	(0)	4103778
23	24.4	9.9	1.3	chr9	83937369	83937509	(54457208)	+	GA-rich	Low_complexity	1	155	(0)	4103779
335	24.8	3.5	2.7	chr9	83937532	83937643	(54457074)	C	MLT1L	LTR/ERVL-MaLR	(7)	603	491	4103780
19	15.3	0.0	0.0	chr9	83987047	83987083	(54407634)	+	(CCTTC)n	Simple_repeat	1	37	(0)	4103862
1956	11.5	3.9	0.0	chr9	83987084	83987352	(54407365)	C	AluSx	SINE/Alu	(32)	280	1	4103863
94	1.8	0.0	6.2	chr9	86535090	86535217	(51859500)	+	(CCCTT)n	Simple_repeat	1	128	(0)	4108032
21	34.4	0.0	5.3	chr9	86903218	86903348	(51491369)	+	(CTCCC)n	Simple_repeat	1	131	(0)	4108632
16	0.0	0.0	0.0	chr9	86947767	86947783	(51446934)	+	(T)n	Simple_repeat	1	17	(0)	4108707
28	16.3	0.0	0.0	chr9	86948006	86948053	(51446664)	+	(T)n	Simple_repeat	1	48	(0)	4108708
31	3.3	0.0	0.0	chr9	87495141	87495171	(50899546)	+	(AG)n	Simple_repeat	1	31	(0)	4109597
663	25.3	3.1	4.0	chr9	87495172	87495361	(50899356)	C	MLT1F1	LTR/ERVL-MaLR	(380)	189	1	4109596
6301	17.9	3.4	1.0	chr9	87662586	87662853	(50731864)	C	L1PB4	LINE/L1	(1733)	4413	4119	4109827
1213	21.7	3.8	11.8	chr9	88077654	88078060	(50316657)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	2	4110435
47	17.6	4.8	4.0	chr9	89497978	89498122	(48896595)	+	(GGC)n	Simple_repeat	1	152	(0)	4112563
26	25.9	7.2	4.2	chr9	89498148	89498327	(48896390)	+	(CCTT)n	Simple_repeat	1	193	(0)	4112564
21	11.5	1.8	7.1	chr9	91072043	91072097	(47322620)	+	G-rich	Low_complexity	1	56	(0)	4114662
18	12.1	2.6	2.5	chr9	91817833	91817871	(46576846)	+	G-rich	Low_complexity	1	40	(0)	4115778
587	23.7	0.7	0.0	chr9	91945165	91945299	(46449418)	+	MER3	DNA/hAT-Charlie	73	208	(1)	4115962
1089	33.0	9.5	4.8	chr9	91953968	91955175	(46439542)	+	L2c	LINE/L2	2011	3285	(90)	4115971
13	4.0	7.7	0.0	chr9	92146683	92146708	(46248009)	+	(AGGGA)n	Simple_repeat	1	28	(0)	4116257
37	25.8	3.9	1.5	chr9	92147241	92147368	(46247349)	+	(CTTC)n	Simple_repeat	1	133	(0)	4116258
3257	11.7	3.5	0.0	chr9	92295185	92295679	(46099038)	C	LTR10D	LTR/ERV1	(0)	513	1	4116478
311	27.0	12.6	0.8	chr9	92324834	92324977	(46069740)	C	MIR	SINE/MIR	(96)	172	6	4116518
299	31.6	1.2	1.5	chr9	92668896	92669032	(45725685)	+	MIRc	SINE/MIR	56	189	(79)	4117044
233	35.4	0.0	0.0	chr9	92669040	92669104	(45725613)	C	MIR	SINE/MIR	(79)	183	119	4117045
99	24.6	3.0	1.6	chr9	93010449	93010746	(45383971)	+	GA-rich	Low_complexity	1	307	(0)	4117553
2497	7.5	0.3	0.0	chr9	93192034	93192339	(45202378)	+	AluSc	SINE/Alu	1	307	(2)	4117882
557	32.0	8.2	3.3	chr9	93192340	93192544	(45202173)	C	L2c	LINE/L2	(839)	2580	2354	4117880
217	24.5	3.9	0.0	chr9	95504881	95504929	(42889788)	+	L2b	LINE/L2	3365	3415	(11)	4121295
17	3.5	3.2	3.1	chr9	95509243	95509273	(42885444)	+	(GAGGG)n	Simple_repeat	1	32	(0)	4121307
23	29.0	3.3	5.1	chr9	95511220	95511269	(42883448)	+	(CTCC)n	Simple_repeat	1	65	(92)	4121310
12	14.6	0.0	5.9	chr9	95511270	95511303	(42883414)	+	(CCTTCG)n	Simple_repeat	1	34	(0)	4121311
23	29.0	3.3	5.1	chr9	95511304	95511371	(42883346)	+	(CTCC)n	Simple_repeat	66	157	(0)	4121310
18	15.0	2.1	4.1	chr9	95515932	95515979	(42878738)	+	(CTGCGG)n	Simple_repeat	1	49	(0)	4121313
238	26.0	6.4	0.0	chr9	95580879	95580951	(42813766)	+	MER136	DNA	108	185	(133)	4121421
329	30.5	4.4	6.8	chr9	95581013	95581174	(42813543)	+	X6A_LINE	LINE/CR1	629	786	(294)	4121422
20	19.8	5.5	0.0	chr9	96048366	96048420	(42346297)	+	GA-rich	Low_complexity	1	58	(0)	4122127
636	25.8	22.2	4.8	chr9	96381223	96381781	(42012936)	+	L2a	LINE/L2	2749	3406	(20)	4122764
2728	18.1	9.9	8.8	chr9	96398551	96399390	(41995327)	+	L1MB5	LINE/L1	7	856	(5751)	4122791
325	33.3	2.6	2.4	chr9	98192889	98193096	(40201621)	+	MIR	SINE/MIR	40	246	(22)	4126037
594	24.9	9.5	0.6	chr9	98193302	98193483	(40201234)	C	MIR	SINE/MIR	(28)	234	35	4126038
1863	17.6	1.0	1.6	chr9	98782801	98783107	(39611610)	+	AluJb	SINE/Alu	1	305	(7)	4127183
23	15.4	0.0	2.1	chr9	98783108	98783154	(39611563)	+	G-rich	Low_complexity	1	47	(0)	4127184
526	23.7	14.3	6.2	chr9	99063119	99063406	(39331311)	C	L2c	LINE/L2	(0)	3387	3073	4127775
339	37.2	9.3	0.6	chr9	99063546	99063888	(39330829)	C	L2c	LINE/L2	(508)	2911	2536	4127775
17	0.0	0.0	0.0	chr9	99821691	99821741	(38572976)	+	(CG)n	Simple_repeat	1	51	(0)	4129131
16	14.3	0.0	6.8	chr9	100473999	100474042	(37920675)	+	G-rich	Low_complexity	1	44	(0)	4130228
25	26.0	3.5	3.4	chr9	104868964	104869083	(33525634)	+	G-rich	Low_complexity	1	120	(0)	4136380
13	13.8	2.9	2.9	chr9	104991212	104991245	(33403472)	+	(CCCGCC)n	Simple_repeat	1	35	(0)	4136642
17	10.0	0.0	5.6	chr9	105694838	105694873	(32699844)	+	G-rich	Low_complexity	1	36	(0)	4137932
1173	23.2	4.9	6.3	chr9	105890457	105890852	(32503865)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	4138175
29	24.3	5.2	3.5	chr9	106860928	106861063	(31533654)	+	(CTCCTTT)n	Simple_repeat	1	143	(0)	4139690
52	23.1	0.8	0.0	chr9	106862510	106862631	(31532086)	+	(CTC)n	Simple_repeat	1	123	(0)	4139692
77	12.9	3.7	0.0	chr9	106863000	106863135	(31531582)	+	GA-rich	Low_complexity	1	141	(0)	4139694
63	19.1	0.7	2.7	chr9	106863510	106863655	(31531062)	+	GA-rich	Low_complexity	1	147	(0)	4139695
14	13.6	2.9	2.9	chr9	106863655	106863688	(31531029)	+	(GCT)n	Simple_repeat	1	35	(0)	4139696
180	25.0	6.4	0.0	chr9	107455630	107455673	(30939044)	+	L2c	LINE/L2	3269	3315	(72)	4140753
387	27.2	2.8	1.0	chr9	107455698	107455801	(30938916)	+	MIRb	SINE/MIR	23	128	(140)	4140754
14	13.1	0.0	7.7	chr9	107489694	107489732	(30904985)	+	(GCC)n	Simple_repeat	1	39	(0)	4140834
14	24.7	0.0	8.2	chr9	107489948	107490020	(30904697)	+	G-rich	Low_complexity	1	73	(0)	4140835
558	9.9	10.0	0.0	chr9	108636318	108636398	(29758319)	+	5S	rRNA	1	90	(31)	4143037
952	24.4	12.7	5.9	chr9	111458652	111459110	(26935607)	+	MER77B	LTR/ERVL	243	782	(156)	4147876
246	32.0	3.7	5.7	chr9	111851542	111851733	(26542984)	C	L2c	LINE/L2	(755)	2664	2477	4148650
2032	15.2	0.3	3.7	chr9	112446342	112446664	(25948053)	+	AluJr	SINE/Alu	1	312	(0)	4149865
742	31.1	12.2	3.3	chr9	112446674	112447192	(25947525)	C	L1M6	LINE/L1	(5912)	584	13	4149862
24	18.9	4.4	1.4	chr9	112750624	112750691	(25644026)	+	(CCTC)n	Simple_repeat	1	71	(0)	4150443
2759	22.2	5.4	5.0	chr9	113356522	113357242	(25037475)	C	L2a	LINE/L2	(621)	2798	2071	4151495
16	30.6	0.0	5.8	chr9	113377041	113377126	(25017591)	+	(CCCGC)n	Simple_repeat	1	86	(0)	4151546
271	33.8	13.1	5.5	chr9	113380703	113381068	(25013649)	C	L2b	LINE/L2	(18)	3357	2960	4151556
74	24.8	2.0	3.6	chr9	113381166	113381381	(25013336)	+	(TTTC)n	Simple_repeat	1	213	(0)	4151557
281	32.0	8.0	0.0	chr9	114155263	114155365	(24239352)	+	MIR3	SINE/MIR	38	149	(59)	4153073
12	30.3	1.7	1.7	chr9	114155427	114155484	(24239233)	+	G-rich	Low_complexity	1	59	(0)	4153074
1401	21.0	2.0	4.1	chr9	114366307	114366654	(24028063)	+	L1MB8	LINE/L1	5823	6168	(10)	4153510
45	10.9	5.3	2.0	chr9	114366665	114366759	(24027958)	+	GA-rich	Low_complexity	1	100	(0)	4153512
536	31.3	6.0	2.4	chr9	114366796	114367050	(24027667)	+	L4_A_Mam	LINE/RTE-X	4708	4972	(18)	4153513
288	33.9	7.6	2.3	chr9	120890819	120891199	(17503518)	+	L2c	LINE/L2	2829	3227	(160)	4165921
34	18.6	1.2	2.5	chr9	120891228	120891307	(17503410)	+	(CCTCC)n	Simple_repeat	1	81	(0)	4165922
543	20.9	3.7	6.5	chr9	120891389	120891557	(17503160)	C	MER5B	DNA/hAT-Charlie	(12)	166	3	4165923
23	22.3	3.0	5.9	chr9	121268064	121268162	(17126555)	+	(CCCG)n	Simple_repeat	1	102	(0)	4166636
250	32.9	7.0	4.6	chr9	121287251	121287403	(17107314)	+	MIR3	SINE/MIR	2	158	(50)	4166676
287	24.6	8.4	1.0	chr9	121556629	121556732	(16837985)	+	L2b	LINE/L2	3246	3386	(1)	4167243
737	24.0	8.1	1.5	chr9	121589722	121589916	(16804801)	+	LTR16A	LTR/ERVL	132	340	(111)	4167324
82	0.0	0.0	0.0	chr9	121589917	121589989	(16804728)	+	(TCCCT)n	Simple_repeat	1	73	(0)	4167325
14	14.7	0.0	3.1	chr9	121651595	121651626	(16743091)	+	GA-rich	Low_complexity	1	32	(0)	4167463
1826	17.5	1.9	2.8	chr9	121860513	121860876	(16533841)	+	MLT1A0	LTR/ERVL-MaLR	1	361	(4)	4167820
491	23.3	0.8	12.2	chr9	121861051	121861087	(16533630)	+	MIRb	SINE/MIR	22	51	(217)	4167821
37	22.7	0.0	0.0	chr9	122228971	122229053	(16165664)	+	(CCT)n	Simple_repeat	1	83	(0)	4168590
20	30.4	0.0	2.9	chr9	122229146	122229214	(16165503)	+	(AC)n	Simple_repeat	1	69	(0)	4168591
238	29.8	9.5	3.1	chr9	122827869	122827996	(15566721)	+	L2b	LINE/L2	3205	3341	(34)	4169620
36	4.6	0.0	2.1	chr9	122905288	122905334	(15489383)	+	(CCT)n	Simple_repeat	1	47	(0)	4169756
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
292	26.5	5.7	0.0	chr9	123326357	123326439	(15068278)	C	L2b	LINE/L2	(2)	3373	3286	4170505
243	32.0	12.2	4.7	chr9	123678160	123678287	(14716430)	+	L2a	LINE/L2	3287	3425	(1)	4171127
24	30.5	1.7	3.3	chr9	124011383	124011501	(14383216)	+	(CTCCCTC)n	Simple_repeat	1	121	(0)	4171699
433	21.9	2.0	0.0	chr9	124019370	124019465	(14375252)	C	MER53	DNA/hAT	(0)	193	96	4171709
1041	11.9	1.4	0.0	chr9	124045007	124045149	(14349568)	C	AluSx3	SINE/Alu	(2)	309	165	4171779
13	14.4	3.2	0.0	chr9	124045386	124045416	(14349301)	+	GA-rich	Low_complexity	1	32	(0)	4171780
339	27.3	8.6	0.8	chr9	124478719	124478847	(13915870)	C	MIRb	SINE/MIR	(8)	260	121	4172657
12	25.8	1.9	3.6	chr9	124758242	124758295	(13636422)	+	(CTCCCCT)n	Simple_repeat	1	55	(0)	4173173
411	27.5	11.8	1.3	chr9	124810576	124810726	(13583991)	C	MIRb	SINE/MIR	(5)	263	95	4173276
13	10.4	6.5	0.0	chr9	124810799	124810829	(13583888)	+	(CCCTC)n	Simple_repeat	1	33	(0)	4173277
649	21.4	1.9	12.6	chr9	125126110	125126339	(13268378)	C	MLT1F1	LTR/ERVL-MaLR	(152)	417	213	4173946
36	0.0	0.0	0.0	chr9	125126393	125126423	(13268294)	+	(GT)n	Simple_repeat	1	31	(0)	4173947
199	35.7	7.7	0.0	chr9	125428056	125428139	(12966578)	C	L2c	LINE/L2	(5)	3382	3292	4174680
15	12.0	0.0	0.0	chr9	125746549	125746575	(12648142)	+	(CGG)n	Simple_repeat	1	27	(0)	4175276
19	12.9	2.2	4.3	chr9	125746742	125746787	(12647930)	+	(GCG)n	Simple_repeat	1	47	(0)	4175277
1816	20.9	3.3	5.4	chr9	126146419	126146939	(12247778)	+	MER74A	LTR/ERVL	49	558	(0)	4175932
2020	27.9	13.9	6.8	chr9	126374893	126376520	(12018197)	C	HAL1	LINE/L1	(0)	2507	744	4176337
50	23.5	8.4	1.2	chr9	126638974	126639199	(11755518)	+	GA-rich	Low_complexity	1	245	(0)	4176745
12	16.9	0.0	5.4	chr9	126639171	126639207	(11755510)	+	(GAGGCA)n	Simple_repeat	1	37	(0)	4176746
31	20.0	0.0	0.0	chr9	126651115	126651179	(11743538)	+	(CTCT)n	Simple_repeat	1	65	(0)	4176767
20	32.4	0.0	2.6	chr9	126745472	126745548	(11649169)	+	(TCCC)n	Simple_repeat	1	77	(0)	4176938
17	19.0	2.4	0.0	chr9	126781890	126781931	(11612786)	+	G-rich	Low_complexity	1	43	(0)	4177042
219	32.2	10.6	1.0	chr9	127574963	127575166	(10819551)	+	L2	LINE/L2	2735	2960	(459)	4178523
2367	9.1	0.0	0.0	chr9	127575228	127575525	(10819192)	C	AluSg7	SINE/Alu	(11)	298	1	4178524
14	30.1	3.3	3.2	chr9	127612184	127612273	(10782444)	+	(CCCCGC)n	Simple_repeat	1	93	(0)	4178642
967	8.6	0.0	0.0	chr9	127824513	127824628	(10570089)	C	AluSx3	SINE/Alu	(6)	305	190	4179094
405	18.4	2.2	1.1	chr9	127824637	127824724	(10569993)	C	MIR	SINE/MIR	(93)	169	81	4179095
19	9.7	0.0	2.8	chr9	127824757	127824792	(10569925)	+	(AAGGG)n	Simple_repeat	1	36	(0)	4179096
417	22.9	11.3	0.8	chr9	127904085	127904203	(10490514)	C	MIR	SINE/MIR	(20)	242	110	4179297
219	31.6	1.3	3.8	chr9	127931104	127931182	(10463535)	C	MIR3	SINE/MIR	(63)	145	69	4179359
374	24.4	3.4	0.0	chr9	127931182	127931267	(10463450)	C	L2b	LINE/L2	(0)	3375	3287	4179360
422	26.5	16.0	1.7	chr9	127931274	127931738	(10462979)	+	L2b	LINE/L2	2785	3332	(43)	4179361
13	25.2	0.0	7.7	chr9	127965552	127965616	(10429101)	+	(TCCC)n	Simple_repeat	1	65	(0)	4179423
370	25.0	11.1	0.8	chr9	127968408	127968528	(10426189)	+	L2a	LINE/L2	3290	3424	(2)	4179429
67	19.3	1.3	2.5	chr9	128246676	128246830	(10147887)	+	(CTCC)n	Simple_repeat	1	157	(0)	4180070
27	6.0	0.0	0.0	chr9	128371210	128371244	(10023473)	+	(CCCTC)n	Simple_repeat	1	35	(0)	4180370
13	8.5	4.0	0.0	chr9	128457127	128457151	(9937566)	+	(CCCCT)n	Simple_repeat	1	26	(0)	4180572
1780	14.1	2.7	2.1	chr9	128549544	128549831	(9844886)	C	L1MB3	LINE/L1	(45)	6138	5849	4180811
15	11.6	0.0	0.0	chr9	128549999	128550026	(9844691)	+	(GGGAG)n	Simple_repeat	1	28	(0)	4180813
13	25.1	3.9	4.9	chr9	128552302	128552379	(9842338)	+	(CCCTCGC)n	Simple_repeat	1	81	(0)	4180816
12	12.0	3.7	0.0	chr9	128552423	128552449	(9842268)	+	G-rich	Low_complexity	1	28	(0)	4180817
259	33.6	0.9	6.1	chr9	128686213	128686326	(9708391)	+	LSU-rRNA_Hsa	rRNA	3024	3131	(1904)	4181094
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
16	17.8	4.3	2.0	chr9	128689519	128689524	(9705193)	+	(CCCTCC)n	Simple_repeat	1	13	(36)	4181107
13	12.5	0.0	3.5	chr9	128689525	128689553	(9705164)	+	(CCCTT)n	Simple_repeat	1	29	(0)	4181108
16	17.8	4.3	2.0	chr9	128689554	128689565	(9705152)	+	(CCCTCC)n	Simple_repeat	14	49	(0)	4181107
508	14.9	7.6	3.2	chr9	128768934	128769046	(9625671)	C	FLAM_C	SINE/Alu	(159)	142	30	4181281
513	28.2	5.3	2.8	chr9	129005828	129006009	(9388708)	+	MIRb	SINE/MIR	74	260	(8)	4181862
13	22.0	4.3	5.5	chr9	129022431	129022500	(9372217)	+	G-rich	Low_complexity	1	73	(0)	4181891
219	23.1	0.0	3.7	chr9	129022576	129022629	(9372088)	+	MIR3	SINE/MIR	108	159	(49)	4181892
312	28.4	2.2	0.0	chr9	129022635	129022722	(9371995)	C	Charlie4z	DNA/hAT-Charlie	(20)	147	58	4181893
304	28.6	1.3	0.0	chr9	129023925	129024001	(9370716)	C	MIRb	SINE/MIR	(82)	186	109	4181897
19	13.8	2.5	0.0	chr9	129027023	129027062	(9367655)	+	(ACAACG)n	Simple_repeat	1	41	(0)	4181906
298	24.0	9.4	0.0	chr9	129072317	129072434	(9322283)	+	MIR3	SINE/MIR	18	155	(53)	4182028
365	30.0	13.7	5.7	chr9	129072613	129072688	(9322029)	C	L1MC5	LINE/L1	(24)	9280	9202	4182029
12	27.0	3.3	3.2	chr9	129109905	129109965	(9284752)	+	G-rich	Low_complexity	1	63	(0)	4182104
2365	8.7	0.0	1.0	chr9	129119408	129119707	(9275010)	C	AluY	SINE/Alu	(14)	297	1	4182127
232	28.5	18.2	3.1	chr9	129119708	129119743	(9274974)	C	L1ME3Cz	LINE/L1	(891)	106	76	4182125
2373	9.1	0.3	0.0	chr9	129119977	129120274	(9274443)	+	AluSx	SINE/Alu	1	299	(13)	4182128
22	14.7	1.7	5.1	chr9	129140780	129140837	(9253880)	+	G-rich	Low_complexity	1	59	(0)	4182168
492	23.0	3.0	5.8	chr9	129164302	129164472	(9230245)	+	MLT1K	LTR/ERVL-MaLR	397	562	(33)	4182207
14	11.5	2.2	8.7	chr9	129167179	129167223	(9227494)	+	(CTCC)n	Simple_repeat	1	46	(0)	4182220
309	27.4	13.6	3.3	chr9	129167295	129167451	(9227266)	C	MIRb	SINE/MIR	(22)	186	19	4182221
24	11.0	4.5	5.8	chr9	129174945	129175010	(9219707)	+	G-rich	Low_complexity	1	69	(0)	4182241
16	22.6	0.0	0.0	chr9	129175064	129175096	(9219621)	+	A-rich	Low_complexity	1	33	(0)	4182242
20	9.7	0.0	2.8	chr9	129237310	129237345	(9157372)	+	(GAGG)n	Simple_repeat	1	36	(0)	4182392
15	8.1	0.0	3.6	chr9	129437271	129437298	(8957419)	+	(GGAG)n	Simple_repeat	1	28	(0)	4182820
603	31.0	1.6	4.9	chr9	129455710	129455972	(8938745)	+	MIR	SINE/MIR	6	255	(7)	4182873
248	34.9	9.0	4.8	chr9	129485263	129485830	(8908887)	C	L2c	LINE/L2	(1)	3386	2794	4182944
21	14.1	3.3	4.8	chr9	129488103	129488162	(8906555)	+	(CACACT)n	Simple_repeat	1	62	(0)	4182950
244	25.7	9.3	2.4	chr9	129490155	129490307	(8904410)	+	L2b	LINE/L2	2941	3118	(257)	4182958
23	29.0	2.8	7.2	chr9	129497006	129497181	(8897536)	+	GA-rich	Low_complexity	1	181	(0)	4182973
20	25.6	1.0	7.1	chr9	129497093	129497190	(8897527)	+	G-rich	Low_complexity	1	99	(0)	4182974
308	33.5	6.7	2.4	chr9	129567851	129568018	(8826699)	C	MIR3	SINE/MIR	(24)	184	5	4183147
57	0.0	5.1	0.0	chr9	129607459	129607517	(8787200)	+	(GT)n	Simple_repeat	1	62	(0)	4183238
1920	16.2	1.3	0.3	chr9	129611741	129612048	(8782669)	C	AluJo	SINE/Alu	(0)	312	2	4183246
212	30.2	8.5	0.0	chr9	129641351	129641436	(8753281)	+	L2a	LINE/L2	3286	3379	(47)	4183296
13	22.7	3.6	3.5	chr9	129665551	129665605	(8729112)	+	G-rich	Low_complexity	1	57	(0)	4183353
1760	15.0	4.5	0.0	chr9	129989758	129990031	(8404686)	+	AluJb	SINE/Alu	2	288	(24)	4184052
1302	12.9	4.3	11.6	chr9	129990032	129990234	(8404483)	+	L1MA8	LINE/L1	6122	6297	(3)	4184051
59	18.8	0.6	5.1	chr9	130138405	130138560	(8256157)	+	(CCCTCC)n	Simple_repeat	1	157	(0)	4184390
2204	9.9	1.3	2.0	chr9	130196458	130196761	(8197956)	+	AluSx1	SINE/Alu	2	303	(9)	4184528
866	27.2	3.5	0.7	chr9	130196885	130197162	(8197555)	C	L1MC4	LINE/L1	(365)	7677	7392	4184529
253	35.1	0.0	12.2	chr9	130212495	130212619	(8182098)	C	MIR3	SINE/MIR	(56)	152	44	4184572
14	15.2	2.4	4.8	chr9	130212652	130212692	(8182025)	+	GA-rich	Low_complexity	1	42	(0)	4184574
182	35.3	1.4	0.0	chr9	130268630	130268697	(8126020)	C	L2b	LINE/L2	(10)	3365	3297	4184685
477	32.0	0.5	11.3	chr9	130282221	130282467	(8112250)	C	MIRb	SINE/MIR	(13)	255	36	4184718
15	17.2	2.4	2.4	chr9	130310079	130310119	(8084598)	+	(CTGCCC)n	Simple_repeat	1	42	(0)	4184760
975	22.6	5.2	0.0	chr9	130310224	130310462	(8084255)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	318	4184761
208	40.4	7.1	0.0	chr9	130439469	130439621	(7955096)	C	L2	LINE/L2	(586)	2833	2670	4185006
2265	12.4	0.0	0.0	chr9	130448565	130448863	(7945854)	C	AluSz6	SINE/Alu	(13)	299	1	4185029
2023	15.2	0.0	3.8	chr9	130449049	130449363	(7945354)	+	AluJb	SINE/Alu	1	303	(9)	4185030
13	14.7	0.0	3.1	chr9	130491015	130491046	(7903671)	+	(CTCTC)n	Simple_repeat	1	32	(0)	4185113
16	13.6	4.8	2.3	chr9	130500594	130500635	(7894082)	+	(TCCCC)n	Simple_repeat	1	44	(0)	4185138
1573	16.6	0.7	3.3	chr9	130546394	130546693	(7848024)	+	MLT1C	LTR/ERVL-MaLR	176	467	(0)	4185274
301	31.6	5.0	2.9	chr9	130680889	130681025	(7713692)	C	MIRc	SINE/MIR	(43)	225	86	4185573
1981	19.7	5.5	0.9	chr9	130763455	130763890	(7630827)	C	MLT1F	LTR/ERVL-MaLR	(87)	461	5	4185754
43	0.0	2.2	2.2	chr9	130846082	130846126	(7548591)	+	(TG)n	Simple_repeat	1	46	(0)	4185923
188	32.9	1.2	7.9	chr9	131096178	131096266	(7298451)	C	MIR	SINE/MIR	(72)	190	108	4186387
43	12.4	7.3	0.0	chr9	131096389	131096484	(7298233)	+	G-rich	Low_complexity	1	103	(0)	4186388
12	24.4	0.0	4.3	chr9	131096868	131096914	(7297803)	+	(GCGCCGC)n	Simple_repeat	1	47	(0)	4186390
17	16.3	3.2	6.2	chr9	131097001	131097062	(7297655)	+	(CCTCCG)n	Simple_repeat	1	64	(0)	4186391
748	11.1	48.6	1.4	chr9	131268918	131269124	(7125593)	+	AluSx	SINE/Alu	1	305	(7)	4186709
439	31.0	10.0	6.4	chr9	131349905	131350280	(7044437)	C	L2b	LINE/L2	(1)	3386	2994	4186882
14	14.9	5.4	0.0	chr9	131393728	131393764	(7000953)	+	(CCCAGG)n	Simple_repeat	1	39	(0)	4187011
13	18.8	4.5	2.2	chr9	131393757	131393800	(7000917)	+	(CCTGGCT)n	Simple_repeat	1	46	(0)	4187012
380	26.4	0.0	0.0	chr9	131396063	131396153	(6998564)	+	MIRc	SINE/MIR	114	204	(64)	4187016
35	13.7	4.9	4.7	chr9	131396226	131396315	(6998402)	+	(TTCC)n	Simple_repeat	1	91	(0)	4187017
463	28.9	12.5	2.8	chr9	131678200	131678551	(6716166)	C	L4_C_Mam	LINE/RTE-X	(183)	4955	4565	4187469
541	26.7	10.4	3.4	chr9	131696883	131697060	(6697657)	C	MIRb	SINE/MIR	(8)	260	69	4187499
14	14.2	3.2	0.0	chr9	131697181	131697211	(6697506)	+	(CCTC)n	Simple_repeat	1	32	(0)	4187500
673	25.7	4.0	0.6	chr9	131698289	131698471	(6696246)	+	MIRb	SINE/MIR	1	192	(76)	4187502
569	26.9	9.6	5.7	chr9	131698498	131698943	(6695774)	+	MLT1H	LTR/ERVL-MaLR	1	534	(15)	4187503
34	16.5	0.0	0.0	chr9	131881410	131881472	(6513245)	+	G-rich	Low_complexity	1	63	(0)	4187881
929	19.8	1.9	16.2	chr9	131881552	131881794	(6512923)	C	L1MD3	LINE/L1	(9)	7986	7572	4187882
1176	23.5	4.1	0.3	chr9	131883681	131883962	(6510755)	C	L1ME1	LINE/L1	(13)	6166	5874	4187888
74	24.7	5.0	0.0	chr9	131900908	131901125	(6493592)	+	GA-rich	Low_complexity	1	229	(0)	4187912
271	29.1	15.2	2.6	chr9	132067390	132067583	(6327134)	C	L2c	LINE/L2	(237)	3150	2928	4188154
378	13.8	21.0	0.0	chr9	132067683	132067704	(6327013)	+	L1MC5a	LINE/L1	2650	2671	(106)	4188155
2077	8.8	1.1	0.4	chr9	132067705	132067976	(6326741)	C	AluY	SINE/Alu	(5)	306	33	4188156
21	13.4	2.4	0.0	chr9	132162065	132162105	(6232612)	+	(CGG)n	Simple_repeat	1	42	(0)	4188352
11	24.0	2.6	0.0	chr9	132162116	132162154	(6232563)	+	(GCGCCCC)n	Simple_repeat	1	40	(0)	4188353
57	11.6	0.0	0.0	chr9	132162524	132162617	(6232100)	+	(GT)n	Simple_repeat	1	94	(0)	4188354
367	25.8	0.0	0.0	chr9	132560655	132560751	(5833966)	+	MIRc	SINE/MIR	48	144	(124)	4189144
432	33.0	5.7	4.1	chr9	132562286	132562579	(5832138)	C	L1ME3Cz	LINE/L1	(129)	868	570	4189147
18	27.5	0.0	0.0	chr9	132582025	132582072	(5812645)	+	GA-rich	Low_complexity	1	48	(0)	4189187
452	29.1	14.8	5.8	chr9	132752621	132753047	(5641670)	+	L2a	LINE/L2	2955	3426	(0)	4189446
1318	14.6	15.2	0.8	chr9	132859258	132859511	(5535206)	C	AluJb	SINE/Alu	(15)	297	1	4189625
17	24.0	1.3	6.6	chr9	132859588	132859662	(5535055)	+	(CCTTC)n	Simple_repeat	1	76	(0)	4189626
32	16.6	6.0	1.1	chr9	132875014	132875097	(5519620)	+	GA-rich	Low_complexity	1	89	(0)	4189649
200	17.8	1.2	0.0	chr9	132878628	132878677	(5516040)	+	MIR1_Amn	SINE/MIR	110	161	(47)	4189658
733	26.2	1.3	3.9	chr9	132943511	132943740	(5450977)	+	MIRb	SINE/MIR	37	260	(8)	4189756
969	14.7	5.0	1.2	chr9	133060453	133060624	(5334093)	+	L1MC1	LINE/L1	6137	6315	(18)	4189999
22	21.2	5.0	2.4	chr9	133060648	133060659	(5334058)	+	(CTCCCT)n	Simple_repeat	1	80	(0)	4190000
12	20.9	7.8	2.9	chr9	133060660	133060723	(5333994)	+	(CTGCC)n	Simple_repeat	1	69	(0)	4190001
1001	13.1	8.6	2.0	chr9	133080923	133081117	(5313600)	+	L1MC1	LINE/L1	6125	6333	(0)	4190022
28	17.9	3.7	3.5	chr9	133081125	133081206	(5313511)	+	(CTCCCT)n	Simple_repeat	1	85	(0)	4190032
194	31.2	4.4	3.5	chr9	133148723	133148835	(5245882)	+	MIR3	SINE/MIR	42	155	(53)	4190138
226	31.9	3.1	0.7	chr9	133509099	133509218	(4885499)	C	MIR1_Amn	SINE/MIR	(65)	203	82	4190701
11	25.6	0.0	2.5	chr9	133527571	133527610	(4867107)	+	G-rich	Low_complexity	1	40	(0)	4190726
285	31.9	13.6	1.0	chr9	133584631	133584823	(4809894)	C	L2c	LINE/L2	(160)	3215	2995	4190799
331	24.1	3.7	3.5	chr9	133759511	133759657	(4635060)	+	MLT1B	LTR/ERVL-MaLR	251	467	(0)	4191053
186	20.4	2.2	0.0	chr9	133759899	133759942	(4634775)	+	MIRb	SINE/MIR	224	268	(0)	4191054
214	31.7	14.9	1.1	chr9	133838116	133838300	(4556417)	+	L2b	LINE/L2	2958	3172	(203)	4191145
769	27.4	9.8	4.2	chr9	133959619	133960002	(4434715)	+	MLT1C	LTR/ERVL-MaLR	44	451	(16)	4191321
159	26.4	0.5	1.1	chr9	134024899	134025331	(4369386)	+	(CTC)n	Simple_repeat	1	435	(0)	4191431
17	19.5	3.5	3.4	chr9	134068534	134068590	(4326127)	+	(GGCG)n	Simple_repeat	1	59	(0)	4191478
186	28.4	10.0	0.0	chr9	134068751	134068831	(4325886)	+	MIR3	SINE/MIR	103	192	(16)	4191479
12	15.8	0.0	3.3	chr9	134125944	134125973	(4268744)	+	G-rich	Low_complexity	1	30	(0)	4191613
1938	12.8	3.8	0.0	chr9	134126078	134126359	(4268358)	+	AluSc8	SINE/Alu	1	293	(18)	4191614
289	25.5	4.3	1.8	chr9	134176620	134176731	(4217986)	C	MLT1D	LTR/ERVL-MaLR	(114)	391	277	4191683
40	21.8	4.2	1.6	chr9	134645920	134646038	(3748679)	+	(TTCC)n	Simple_repeat	1	124	(0)	4192285
211	31.9	9.0	4.1	chr9	135018014	135018160	(3376557)	C	MIRb	SINE/MIR	(88)	180	26	4192669
176	17.9	1.2	0.3	chr9	135096030	135096364	(3298353)	+	(TCC)n	Simple_repeat	1	339	(0)	4192761
23	20.9	0.0	0.0	chr9	135217607	135217657	(3177060)	+	(CTCC)n	Simple_repeat	1	51	(0)	4192916
16	16.8	0.0	0.0	chr9	135701709	135701735	(2692982)	+	G-rich	Low_complexity	1	27	(0)	4193547
29	0.0	0.0	0.0	chr9	135967784	135967808	(2426909)	+	(GT)n	Simple_repeat	1	25	(0)	4193861
76	36.3	0.9	2.1	chr9	135967825	135968156	(2426561)	+	(TG)n	Simple_repeat	1	335	(0)	4193862
14	17.1	0.0	6.7	chr9	135979496	135979540	(2415177)	+	(CCTCCC)n	Simple_repeat	1	45	(0)	4193881
12	10.0	0.0	0.0	chr9	136051029	136051050	(2343667)	+	(GGGA)n	Simple_repeat	1	22	(0)	4193970
57	1.7	1.6	1.6	chr9	136051877	136051939	(2342778)	+	(AGG)n	Simple_repeat	1	64	(0)	4193971
13	26.3	3.6	1.7	chr9	136052440	136052495	(2342222)	+	G-rich	Low_complexity	1	58	(0)	4193972
11	27.1	2.3	0.0	chr9	136118138	136118181	(2276536)	+	(GGCCCT)n	Simple_repeat	1	45	(0)	4194045
21	10.4	0.0	6.4	chr9	136118868	136118914	(2275803)	+	(GCGT)n	Simple_repeat	1	47	(0)	4194047
13	12.3	3.8	9.1	chr9	136118938	136118990	(2275727)	+	(GCCTGC)n	Simple_repeat	1	55	(0)	4194048
13	8.1	3.9	0.0	chr9	136192420	136192445	(2202272)	+	(GGAGG)n	Simple_repeat	1	27	(0)	4194141
14	14.0	3.1	0.0	chr9	136197901	136197932	(2196785)	+	(CTGCCC)n	Simple_repeat	1	33	(0)	4194146
320	30.9	4.2	0.3	chr9	136197998	136198119	(2196598)	C	MIRc	SINE/MIR	(29)	201	80	4194147
18	22.5	0.0	0.0	chr9	136268710	136268746	(2125971)	+	(TA)n	Simple_repeat	1	37	(0)	4194202
4894	22.1	11.0	12.6	chr9	136268759	136269373	(2125344)	+	L1MEc	LINE/L1	114	764	(5636)	4194203
19	17.4	0.0	0.0	chr9	136284116	136284155	(2110562)	+	GA-rich	Low_complexity	1	40	(0)	4194221
12	26.5	3.2	3.1	chr9	136410607	136410668	(1984049)	+	(AGCGGA)n	Simple_repeat	1	64	(0)	4194344
397	28.2	7.1	0.0	chr9	136488609	136488725	(1905992)	+	MIRb	SINE/MIR	50	175	(93)	4194428
841	19.7	0.0	0.0	chr9	136488864	136488995	(1905722)	+	FLAM_C	SINE/Alu	2	133	(10)	4194429
22	31.5	2.1	6.1	chr9	136551562	136551718	(1842999)	+	(CTTT)n	Simple_repeat	1	150	(0)	4194484
13	14.8	0.0	3.1	chr9	136572379	136572410	(1822307)	+	(CAGAGC)n	Simple_repeat	1	32	(0)	4194507
186	39.1	0.2	0.8	chr9	136630737	136631565	(1763152)	+	(ACAC)n	Simple_repeat	1	831	(0)	4194567
19	14.1	2.6	0.0	chr9	136687298	136687336	(1707381)	+	(CAG)n	Simple_repeat	1	40	(0)	4194650
24	28.0	1.3	0.0	chr9	136687441	136687517	(1707200)	+	G-rich	Low_complexity	1	78	(0)	4194651
31	27.9	2.0	4.6	chr9	136687516	136687665	(1707052)	+	(CGCCC)n	Simple_repeat	1	153	(0)	4194652
462	26.2	1.4	7.8	chr9	136758564	136758671	(1636046)	+	MIR	SINE/MIR	22	121	(141)	4194759
15	28.2	1.1	6.5	chr9	136848951	136849042	(1545675)	+	G-rich	Low_complexity	1	93	(0)	4194875
2396	8.0	1.3	0.0	chr9	136919296	136919594	(1475123)	C	AluSp	SINE/Alu	(10)	303	1	4195003
13	15.5	0.0	3.2	chr9	136919621	136919651	(1475066)	+	(TTTCT)n	Simple_repeat	1	31	(0)	4195004
1787	20.1	0.0	0.7	chr9	136919719	136920016	(1474701)	C	AluJb	SINE/Alu	(15)	297	2	4195005
3276	14.8	0.8	0.0	chr9	137058489	137058981	(1335736)	+	LOR1a	LTR/ERV1	1	497	(0)	4195165
917	20.4	1.8	0.0	chr9	137059037	137059198	(1335519)	C	AluJo	SINE/Alu	(12)	300	136	4195166
183	19.5	2.4	0.0	chr9	137072366	137072406	(1322311)	+	L2b	LINE/L2	3316	3357	(18)	4195191
12	8.1	8.9	6.1	chr9	137072582	137072626	(1322091)	+	(CAGGC)n	Simple_repeat	1	49	(0)	4195192
18	10.4	0.0	0.0	chr9	137149242	137149272	(1245445)	+	(CCACCC)n	Simple_repeat	1	31	(0)	4195302
13	17.6	0.0	2.9	chr9	137149443	137149476	(1245241)	+	(AGGCCC)n	Simple_repeat	1	34	(0)	4195303
27	17.2	4.6	4.4	chr9	137227882	137227981	(1166736)	+	G-rich	Low_complexity	1	100	(0)	4195368
13	18.1	0.0	7.0	chr9	137240441	137240446	(1154271)	+	(GCCCC)n	Simple_repeat	1	13	(30)	4195375
17	7.9	0.0	0.0	chr9	137240447	137240473	(1154244)	+	(CCCCT)n	Simple_repeat	1	27	(0)	4195376
13	18.1	0.0	7.0	chr9	137240474	137240483	(1154234)	+	(GCCCC)n	Simple_repeat	14	43	(0)	4195375
1825	19.4	8.6	6.5	chr9	137249657	137250192	(1144525)	+	MER21A	LTR/ERVL	378	925	(6)	4195387
1315	5.6	3.6	0.0	chr9	137257330	137257489	(1137228)	C	AluYh3	SINE/Alu	(13)	298	133	4195392
12	16.3	2.8	2.7	chr9	137274777	137274812	(1119905)	+	(CTGGCAG)n	Simple_repeat	1	37	(0)	4195430
21	17.2	10.0	1.1	chr9	137300760	137300839	(1093878)	+	G-rich	Low_complexity	1	88	(0)	4195477
13	15.2	0.0	3.2	chr9	137312890	137312920	(1081797)	+	(ACCTG)n	Simple_repeat	1	31	(0)	4195484
19	18.3	0.0	7.7	chr9	137458849	137458913	(935804)	+	G-rich	Low_complexity	1	65	(0)	4195656
814	19.3	6.0	3.8	chrX	8815539	8815748	(147225147)	+	MER20	DNA/hAT-Charlie	2	216	(3)	4373751
1591	24.7	2.2	4.2	chrX	8815793	8816442	(147224453)	+	Charlie2b	DNA/hAT-Charlie	2146	2782	(0)	4373752
24	10.1	2.3	0.0	chrX	9531216	9531258	(146509637)	+	(AGGGAG)n	Simple_repeat	1	44	(0)	4374959
60	0.0	3.5	0.0	chrX	9531355	9531412	(146509483)	+	(GT)n	Simple_repeat	1	60	(0)	4374960
20	12.2	0.0	7.7	chrX	11758385	11758436	(144282459)	+	G-rich	Low_complexity	1	52	(0)	4378538
20	30.5	2.3	1.1	chrX	12791390	12791475	(143249420)	+	(GCC)n	Simple_repeat	1	88	(0)	4380115
1041	18.8	4.6	0.0	chrX	13734092	13734298	(142306597)	+	MER20	DNA/hAT-Charlie	3	219	(0)	4381668
449	33.6	5.0	3.7	chrX	15849820	15850113	(140190782)	+	L2	LINE/L2	1820	2117	(1302)	4385074
23	15.4	0.0	5.4	chrX	15854687	15854742	(140186153)	+	(CGG)n	Simple_repeat	1	56	(0)	4385078
695	23.0	14.3	0.5	chrX	16892892	16893101	(139147794)	C	LTR50	LTR/ERVL	(551)	244	1	4386927
4398	10.9	1.6	4.0	chrX	16931644	16932293	(139108602)	+	MER41B	LTR/ERV1	1	634	(0)	4387022
12	25.4	3.8	1.8	chrX	17980989	17981041	(138059854)	+	(CCCCTAC)n	Simple_repeat	1	55	(0)	4388695
14	27.6	0.0	5.0	chrX	17981064	17981123	(138059772)	+	(CCTTCC)n	Simple_repeat	1	60	(0)	4388696
28	17.3	1.9	0.0	chrX	18424846	18424898	(137615997)	+	(TG)n	Simple_repeat	1	54	(0)	4389524
1575	14.3	2.5	3.6	chrX	19346321	19346599	(136694296)	C	AluJo	SINE/Alu	(12)	300	25	4391196
13	15.2	0.0	3.2	chrX	19372464	19372494	(136668401)	+	(TTCTT)n	Simple_repeat	1	31	(0)	4391237
27	30.3	0.9	2.7	chrX	19515085	19515194	(136525701)	+	(CCG)n	Simple_repeat	1	111	(0)	4391495
15	20.0	2.5	0.0	chrX	23783539	23783578	(132257317)	+	(CGCC)n	Simple_repeat	1	41	(0)	4398057
2120	22.4	10.3	8.2	chrX	23979766	23980792	(132060103)	C	L1M4a2	LINE/L1	(1519)	1137	19	4398526
19	17.6	2.2	0.0	chrX	24025694	24025738	(132015157)	+	G-rich	Low_complexity	1	46	(0)	4398623
12	14.3	4.8	4.5	chrX	24025746	24025787	(132015108)	+	(GTCCCGC)n	Simple_repeat	1	44	(0)	4398624
276	22.1	12.8	1.0	chrX	24110113	24110163	(131930732)	C	L1MB7	LINE/L1	(202)	5982	5932	4398830
974	19.8	1.2	0.0	chrX	24110164	24110330	(131930565)	C	AluSx	SINE/Alu	(8)	304	136	4398832
327	13.3	28.2	0.0	chrX	24110332	24110431	(131930464)	C	L1MB5	LINE/L1	(232)	5942	5804	4398833
11	20.6	5.1	0.0	chrX	24150109	24150147	(131890748)	+	(AGGCCGA)n	Simple_repeat	1	41	(0)	4398943
16	18.1	3.0	0.0	chrX	24190685	24190717	(131850178)	+	GA-rich	Low_complexity	1	34	(0)	4399037
680	27.7	4.6	2.6	chrX	24190741	24190933	(131849962)	+	MIRb	SINE/MIR	2	198	(70)	4399038
1947	18.4	7.4	13.5	chrX	24242432	24242533	(131798362)	+	MLT1F2	LTR/ERVL-MaLR	75	167	(393)	4399133
17	4.3	0.0	0.0	chrX	30889257	30889280	(125151615)	+	(GCC)n	Simple_repeat	1	24	(0)	4408915
13	21.4	4.7	0.0	chrX	30889273	30889315	(125151580)	+	(CCTC)n	Simple_repeat	1	45	(0)	4408916
2534	5.4	0.7	0.0	chrX	38326777	38327074	(117713821)	+	AluSp	SINE/Alu	1	300	(13)	4418771
12	27.7	0.0	0.0	chrX	38327280	38327318	(117713577)	+	(GCCC)n	Simple_repeat	1	39	(0)	4418772
19	3.8	0.0	0.0	chrX	39261773	39261800	(116779095)	+	(TTTTG)n	Simple_repeat	1	28	(0)	4420252
14	20.2	0.0	0.0	chrX	39688908	39688943	(116351952)	+	(CCCTC)n	Simple_repeat	1	36	(0)	4420983
16	21.3	0.0	5.6	chrX	39731101	39731154	(116309741)	+	GA-rich	Low_complexity	1	54	(0)	4421061
13	26.5	1.6	4.8	chrX	39841430	39841490	(116199405)	+	G-rich	Low_complexity	1	62	(0)	4421295
188	33.3	0.0	4.0	chrX	39894736	39894810	(116146085)	C	L2a	LINE/L2	(4)	3422	3351	4421396
18	21.6	5.0	6.7	chrX	40040827	40040836	(116000059)	+	(TCC)n	Simple_repeat	1	22	(82)	4421699
16	27.4	3.6	0.0	chrX	40040837	40040892	(116000003)	+	(CTCT)n	Simple_repeat	1	58	(0)	4421700
18	21.6	5.0	6.7	chrX	40040893	40040925	(115999970)	+	(TCC)n	Simple_repeat	23	104	(0)	4421699
569	26.9	2.2	5.8	chrX	40040931	40041218	(115999677)	C	L1ME3C	LINE/L1	(60)	6063	5828	4421701
16	8.8	7.7	2.4	chrX	40088468	40088506	(115952389)	+	GA-rich	Low_complexity	1	42	(0)	4421751
12	25.1	4.3	0.0	chrX	40094702	40094748	(115946147)	+	(CGCGC)n	Simple_repeat	1	49	(0)	4421756
38	15.1	2.4	2.3	chrX	40097986	40098134	(115942761)	+	(TCCC)n	Simple_repeat	1	149	(0)	4421763
12	23.0	0.0	4.5	chrX	40101356	40101399	(115939496)	+	GA-rich	Low_complexity	1	44	(0)	4421768
13	0.0	0.0	0.0	chrX	40109023	40109039	(115931856)	+	(GCG)n	Simple_repeat	1	17	(0)	4421774
919	24.4	11.6	1.3	chrX	40472322	40472699	(115568196)	+	ERV3-16A3_LTR	LTR/ERVL	1	422	(0)	4422526
13	14.2	3.2	0.0	chrX	40647249	40647279	(115393616)	+	G-rich	Low_complexity	1	32	(0)	4422879
193	32.9	10.8	1.4	chrX	40933967	40934108	(115106787)	+	MIRb	SINE/MIR	18	174	(94)	4423327
10066	18.9	8.3	3.7	chrX	41046464	41047415	(114993480)	C	L1MDa	LINE/L1	(4177)	2456	1475	4423567
14	25.2	3.5	1.7	chrX	41085233	41085290	(114955605)	+	G-rich	Low_complexity	1	60	(0)	4423642
36	18.8	6.0	1.7	chrX	41276457	41276554	(114764341)	+	GA-rich	Low_complexity	1	102	(0)	4424008
732	28.2	12.6	2.4	chrX	41302333	41302710	(114738185)	+	LTR16E2	LTR/ERVL	116	537	(31)	4424082
497	31.8	2.7	3.4	chrX	41302815	41303078	(114737817)	C	LTR78	LTR/ERV1	(1042)	262	1	4424080
35	26.4	2.8	3.4	chrX	41333339	41333480	(114707415)	+	(CTCCC)n	Simple_repeat	1	146	(0)	4424165
17	12.3	0.0	5.1	chrX	41335055	41335093	(114705802)	+	G-rich	Low_complexity	1	39	(0)	4424167
17	4.0	0.0	3.6	chrX	41475185	41475212	(114565683)	+	(TCCCC)n	Simple_repeat	1	28	(0)	4424491
12	21.1	4.3	2.1	chrX	41922805	41922850	(114118045)	+	G-rich	Low_complexity	1	48	(0)	4425252
2024	15.8	6.1	8.3	chrX	44543240	44543623	(111497272)	+	MER31B	LTR/ERV1	1	381	(85)	4429098
262	29.4	9.9	0.7	chrX	46575701	46575847	(109465048)	C	L2	LINE/L2	(1949)	1470	1309	4432407
30	20.0	2.2	4.3	chrX	46576135	46576225	(109464670)	+	(CCCCTC)n	Simple_repeat	1	93	(0)	4432408
407	23.3	7.1	6.9	chrX	46577567	46577738	(109463157)	C	MIRb	SINE/MIR	(92)	176	4	4432412
23	11.4	0.0	0.0	chrX	46675023	46675060	(109365835)	+	(GAGA)n	Simple_repeat	1	38	(0)	4432561
69	0.0	0.0	0.0	chrX	46675062	46675120	(109365775)	+	(TG)n	Simple_repeat	1	59	(0)	4432562
384	33.1	4.8	10.1	chrX	46904066	46904351	(109136544)	+	L1MD2	LINE/L1	519	788	(5852)	4433030
4349	20.0	4.1	3.0	chrX	46904332	46905157	(109135738)	+	L1MD2	LINE/L1	1545	2241	(4399)	4433030
13	21.0	8.1	1.5	chrX	46912197	46912258	(109128637)	+	G-rich	Low_complexity	1	67	(0)	4433039
17	11.3	5.0	2.4	chrX	46912446	46912485	(109128410)	+	(CCG)n	Simple_repeat	1	42	(0)	4433040
188	22.5	4.8	0.0	chrX	47217597	47217636	(108823259)	+	L2a	LINE/L2	3367	3408	(18)	4433618
16	21.1	4.1	0.0	chrX	47582233	47582281	(108458614)	+	G-rich	Low_complexity	1	51	(0)	4434475
20	12.2	0.0	0.0	chrX	47650519	47650554	(108390341)	+	(GGTGGC)n	Simple_repeat	1	36	(0)	4434593
1433	21.0	9.4	0.0	chrX	48667672	48668000	(107372895)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	1	4436594
13	8.0	3.5	3.3	chrX	49039951	49039979	(107000916)	+	(CCTCC)n	Simple_repeat	1	30	(0)	4437366
18	18.8	4.7	0.0	chrX	49040633	49040675	(107000220)	+	GA-rich	Low_complexity	1	45	(0)	4437367
12	16.0	5.7	0.0	chrX	49040730	49040764	(107000131)	+	(CCCATCC)n	Simple_repeat	1	37	(0)	4437368
18	15.3	0.0	2.6	chrX	49043454	49043492	(106997403)	+	(CCT)n	Simple_repeat	1	39	(0)	4437372
13	3.7	6.2	5.9	chrX	49065276	49065307	(106975588)	+	(AGCCCC)n	Simple_repeat	1	34	(0)	4437413
12	10.2	10.6	3.9	chrX	49101263	49101309	(106939586)	+	(ATCGACC)n	Simple_repeat	1	52	(0)	4437494
1557	5.2	0.0	2.0	chrX	49155656	49155850	(106885045)	+	L1PA5	LINE/L1	5964	6154	(0)	4437627
18	18.9	6.5	1.5	chrX	49167596	49167657	(106873238)	+	(AGCTGGAG)n	Simple_repeat	1	66	(0)	4437639
1205	26.8	6.8	1.2	chrX	49282499	49283005	(106757890)	C	L2a	LINE/L2	(230)	3196	2668	4437841
15	12.8	2.8	2.7	chrX	49878936	49878971	(106161924)	+	GA-rich	Low_complexity	1	37	(0)	4438514
402	29.1	0.6	2.2	chrX	49879074	49879252	(106161643)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	4438515
552	31.0	1.9	0.6	chrX	51892764	51892919	(104147976)	+	MIRb	SINE/MIR	27	184	(84)	4441281
37837	13.2	1.1	1.1	chrX	52573606	52577916	(103462979)	C	HERV1_I-int	LTR/ERV1	(2705)	4932	576	4442060
404	33.1	7.7	7.4	chrX	53242067	53242151	(102798744)	+	L2b	LINE/L2	3038	3119	(256)	4443293
2546	8.1	0.0	0.0	chrX	53242152	53242460	(102798435)	+	AluSx1	SINE/Alu	1	309	(3)	4443294
209	28.6	6.7	1.2	chrX	53288215	53288299	(102752596)	C	MIR3	SINE/MIR	(10)	198	109	4443398
245	21.3	17.1	7.5	chrX	53332824	53332970	(102707925)	+	L3	LINE/CR1	3600	3763	(336)	4443501
1482	26.2	5.2	4.8	chrX	53685558	53686114	(102354781)	+	L1ME3G	LINE/L1	122	680	(244)	4444217
19	17.5	0.0	4.1	chrX	54183324	54183372	(101857523)	+	G-rich	Low_complexity	1	49	(0)	4445187
20	24.0	2.7	2.7	chrX	54358037	54358109	(101682786)	+	GA-rich	Low_complexity	1	75	(0)	4445571
22	14.0	0.0	0.0	chrX	54495946	54495985	(101544910)	+	(GGGAG)n	Simple_repeat	1	40	(0)	4445932
23	18.5	0.0	0.0	chrX	56764684	56764726	(99276169)	+	A-rich	Low_complexity	1	43	(0)	4448510
228	31.4	8.3	12.2	chrX	65582682	65583073	(90457822)	C	L2c	LINE/L2	(52)	3335	2961	4452562
3196	13.9	1.9	5.1	chrX	68183308	68183891	(87857004)	+	MER34B	LTR/ERV1	1	565	(0)	4455790
1259	3.9	0.0	0.0	chrX	68184055	68184208	(87856687)	+	L1PA4	LINE/L1	6002	6155	(0)	4455791
17	22.0	2.0	2.0	chrX	68647616	68647665	(87393230)	+	(TCCC)n	Simple_repeat	1	51	(0)	4456710
225	34.0	4.7	1.2	chrX	68930458	68930551	(87110344)	+	MIRc	SINE/MIR	35	131	(137)	4457249
17	4.9	0.0	0.0	chrX	68930764	68930784	(87110111)	+	(GT)n	Simple_repeat	1	21	(0)	4457250
12	18.7	3.1	0.0	chrX	68938758	68938789	(87102106)	+	GA-rich	Low_complexity	1	33	(0)	4457273
26	8.7	3.8	3.6	chrX	69082485	69082537	(86958358)	+	(CCT)n	Simple_repeat	1	55	(0)	4457513
26	22.7	0.0	4.8	chrX	69082564	69082647	(86958248)	+	(CCAGCC)n	Simple_repeat	1	84	(0)	4457514
12	21.2	4.0	7.6	chrX	69150572	69150577	(86890318)	+	(CCTCAC)n	Simple_repeat	1	76	(0)	4457647
19	18.7	4.5	4.3	chrX	69150578	69150644	(86890251)	+	(CCCTT)n	Simple_repeat	1	70	(0)	4457648
12	11.0	12.8	0.0	chrX	69287314	69287352	(86753543)	+	GA-rich	Low_complexity	1	44	(0)	4457942
473	23.1	4.1	1.7	chrX	69289543	69289661	(86751234)	C	UCON29	DNA/PiggyBac?	(0)	439	318	4457950
18	24.8	4.7	3.3	chrX	70455085	70455115	(85585780)	+	(CCCT)n	Simple_repeat	1	66	(24)	4459703
24	2.6	2.2	6.5	chrX	70455116	70455161	(85585734)	+	(CTC)n	Simple_repeat	1	44	(0)	4459704
18	24.8	4.7	3.3	chrX	70455162	70455170	(85585725)	+	(CCCT)n	Simple_repeat	67	90	(0)	4459703
14	21.3	1.9	5.5	chrX	71068074	71068127	(84972768)	+	(CCTC)n	Simple_repeat	1	55	(0)	4460742
12	30.9	0.0	3.4	chrX	71096034	71096092	(84944803)	+	G-rich	Low_complexity	1	59	(0)	4460816
13	12.0	0.0	3.5	chrX	71103493	71103521	(84937374)	+	A-rich	Low_complexity	1	29	(0)	4460820
85	3.6	0.0	0.0	chrX	71255085	71255170	(84785725)	+	(TC)n	Simple_repeat	1	86	(0)	4461123
36	22.6	2.2	1.1	chrX	71255181	71255270	(84785625)	+	(CT)n	Simple_repeat	1	92	(0)	4461124
15	24.0	2.8	5.4	chrX	71283339	71283410	(84757485)	+	(TCTCCC)n	Simple_repeat	1	74	(0)	4461190
22	9.4	6.5	0.0	chrX	71366187	71366232	(84674663)	+	(CCCCTCT)n	Simple_repeat	1	49	(0)	4461413
20	13.6	0.0	2.4	chrX	71911446	71911487	(84129408)	+	(CCCTC)n	Simple_repeat	1	42	(0)	4462356
29	22.7	0.0	0.0	chrX	72069385	72069452	(83971443)	+	GA-rich	Low_complexity	1	68	(0)	4462640
44	11.8	1.4	0.0	chrX	72069578	72069650	(83971245)	+	(GGA)n	Simple_repeat	1	74	(0)	4462641
848	34.7	2.9	0.8	chrX	72182945	72183452	(83857443)	C	L2a	LINE/L2	(671)	2748	2230	4462845
394	25.5	3.9	2.0	chrX	72277439	72277538	(83763357)	C	L2b	LINE/L2	(17)	3358	3257	4463037
1532	21.2	3.0	10.2	chrX	72375183	72375847	(83665048)	C	MLT2B1	LTR/ERVL	(1)	600	3	4463263
2251	12.7	0.7	0.0	chrX	73793943	73794249	(82246646)	+	AluSg	SINE/Alu	2	310	(0)	4464750
55	3.9	3.8	0.0	chrX	73794256	73794334	(82246561)	+	(AAGGG)n	Simple_repeat	1	82	(0)	4464751
11	18.4	6.7	2.1	chrX	73842788	73842832	(82198063)	+	(GCAGAGG)n	Simple_repeat	1	48	(0)	4464811
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1892	20.4	5.1	2.5	chrX	74133115	74133512	(81907383)	+	HUERS-P3-int	LTR/ERV1	121	529	(6889)	4465196
4017	17.4	5.3	1.8	chrX	74133575	74134318	(81906577)	+	HUERS-P3-int	LTR/ERV1	742	1513	(7406)	4465196
3259	6.9	3.5	1.9	chrX	74249940	74250412	(81790483)	+	LTR21A	LTR/ERV1	1	481	(0)	4465329
2504	13.5	8.4	0.5	chrX	74343597	74343990	(81696905)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4465490
1852	18.8	7.9	7.6	chrX	74343991	74344242	(81696653)	+	LTR55	LTR/ERVL?	286	531	(17)	4465489
28	20.7	4.3	3.1	chrX	74421368	74421461	(81619434)	+	GA-rich	Low_complexity	1	98	(0)	4465610
13	20.3	0.0	4.7	chrX	74536345	74536387	(81504508)	+	(TGGCCC)n	Simple_repeat	1	43	(0)	4465788
12821	15.4	1.2	1.2	chrX	77493880	77496190	(78544705)	+	L1PA8A	LINE/L1	2	2326	(4157)	4468388
22	19.4	0.0	0.0	chrX	77785766	77785806	(78255089)	+	(C)n	Simple_repeat	1	41	(0)	4468845
107	11.7	3.7	0.5	chrX	80809684	80809870	(75231025)	+	GA-rich	Low_complexity	1	194	(0)	4472223
13	6.8	5.7	5.4	chrX	101408418	101408452	(54632443)	+	(CCCT)n	Simple_repeat	1	37	(0)	4495991
31	10.9	8.2	1.3	chrX	102931947	102932019	(53108876)	+	GA-rich	Low_complexity	1	79	(0)	4497835
2018	16.8	7.9	4.1	chrX	102932056	102932466	(53108429)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4497836
15	10.8	3.3	0.0	chrX	102951048	102951077	(53089818)	+	(TCCC)n	Simple_repeat	1	31	(0)	4497863
12	23.4	0.0	4.9	chrX	103357258	103357298	(52683597)	+	(CTCTT)n	Simple_repeat	1	41	(0)	4498494
46	5.9	0.0	0.0	chrX	103509290	103509342	(52531553)	+	(TC)n	Simple_repeat	1	53	(0)	4498722
67	22.0	2.0	3.9	chrX	103509344	103509543	(52531352)	+	(CTCTC)n	Simple_repeat	1	204	(0)	4498723
495	28.5	10.4	3.2	chrX	103674546	103674795	(52366100)	+	LTR33	LTR/ERVL	23	292	(223)	4498976
21	13.9	0.0	0.0	chrX	103687084	103687116	(52353779)	+	(T)n	Simple_repeat	1	33	(0)	4498992
15	11.7	0.0	0.0	chrX	104166475	104166502	(51874393)	+	(GGCCG)n	Simple_repeat	1	28	(0)	4499664
12	7.8	7.4	0.0	chrX	107484450	107484476	(48556419)	+	(CTCC)n	Simple_repeat	1	29	(0)	4504257
27	11.7	2.1	0.0	chrX	107673123	107673170	(48367725)	+	(GTGT)n	Simple_repeat	1	49	(0)	4504615
12	30.9	0.0	2.0	chrX	107677040	107677089	(48363806)	+	GA-rich	Low_complexity	1	50	(0)	4504626
16	8.2	0.0	0.0	chrX	107732196	107732221	(48308674)	+	(CCTCC)n	Simple_repeat	1	26	(0)	4504724
64	1.7	0.0	0.0	chrX	107742261	107742319	(48298576)	+	(GA)n	Simple_repeat	1	59	(0)	4504742
28	19.5	1.6	0.0	chrX	107742346	107742406	(48298489)	+	G-rich	Low_complexity	1	62	(0)	4504743
20	10.4	0.0	0.0	chrX	107775659	107775690	(48265205)	+	(TCC)n	Simple_repeat	1	32	(0)	4504800
17	16.0	0.0	0.0	chrX	107775831	107775865	(48265030)	+	(CCCT)n	Simple_repeat	1	35	(0)	4504801
511	29.0	2.2	4.3	chrX	108199864	108200047	(47840848)	+	MIRc	SINE/MIR	2	181	(87)	4505421
320	32.2	2.4	4.7	chrX	108353525	108353651	(47687244)	C	L2c	LINE/L2	(238)	3149	3026	4505665
15	20.5	0.0	0.0	chrX	108736260	108736293	(47304602)	+	(CTG)n	Simple_repeat	1	34	(0)	4506168
35	8.3	0.0	0.0	chrX	108737944	108737995	(47302900)	+	(TCTCCC)n	Simple_repeat	1	52	(0)	4506169
2325	19.6	5.8	1.1	chrX	109792343	109792787	(46248108)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	4507358
185	38.5	4.1	0.8	chrX	109792788	109792856	(46248039)	C	MIR3	SINE/MIR	(51)	157	86	4507357
4307	25.1	6.2	11.5	chrX	110138406	110140454	(45900441)	C	L2	LINE/L2	(1057)	2362	430	4507992
15	31.9	2.7	1.3	chrX	112840662	112840736	(43200159)	+	GA-rich	Low_complexity	1	77	(0)	4511970
12	12.2	3.7	0.0	chrX	112846265	112846291	(43194604)	+	(TCCC)n	Simple_repeat	1	28	(0)	4511980
25	12.3	2.2	2.1	chrX	112846296	112846341	(43194554)	+	(CA)n	Simple_repeat	1	47	(0)	4511981
19	32.9	0.0	0.0	chrX	115894033	115894096	(40146799)	+	(TC)n	Simple_repeat	1	64	(0)	4516128
21	18.4	3.0	4.3	chrX	117973780	117973846	(38067049)	+	(CTCCC)n	Simple_repeat	1	69	(0)	4518362
17	23.5	8.1	1.1	chrX	118495733	118495818	(37545077)	+	(AGCG)n	Simple_repeat	1	93	(0)	4519349
80	5.3	2.0	0.0	chrX	119000776	119000873	(37040022)	+	(TC)n	Simple_repeat	1	100	(0)	4520291
13	16.2	0.0	0.0	chrX	119236159	119236186	(36804709)	+	G-rich	Low_complexity	1	28	(0)	4520704
2174	18.1	8.2	13.2	chrX	119280465	119281055	(36759840)	+	MLT1F2	LTR/ERVL-MaLR	1	559	(1)	4520769
1201	11.9	0.0	2.4	chrX	119647079	119647246	(36393649)	+	AluJb	SINE/Alu	133	296	(16)	4521495
235	21.5	1.5	7.1	chrX	119647247	119647316	(36393579)	C	Chap1_Mam	DNA/hAT-Charlie	(146)	196	131	4521494
42	26.6	3.4	1.3	chrX	119647323	119647468	(36393427)	+	(TCCT)n	Simple_repeat	1	151	(0)	4521496
194	34.3	8.0	7.0	chrX	119666366	119666402	(36374493)	C	MamRTE1	LINE/RTE-BovB	(3528)	229	98	4521534
30	13.3	6.1	0.0	chrX	119666506	119666571	(36374324)	+	GA-rich	Low_complexity	1	70	(0)	4521536
31	0.0	3.1	0.0	chrX	119758501	119758532	(36282363)	+	(CCT)n	Simple_repeat	1	33	(0)	4521757
2078	13.0	0.0	0.3	chrX	119772436	119772743	(36268152)	C	AluJb	SINE/Alu	(1)	311	5	4521787
498	24.1	2.6	12.4	chrX	119772746	119773023	(36267872)	+	L2b	LINE/L2	2929	3173	(202)	4521786
2362	9.1	0.0	0.0	chrX	119887382	119887677	(36153218)	+	AluSz	SINE/Alu	1	296	(16)	4522065
1117	10.0	1.3	0.0	chrX	119887931	119888080	(36152815)	C	AluJb	SINE/Alu	(34)	278	127	4522066
67	8.5	0.0	1.9	chrX	119896402	119896505	(36144390)	+	(AGGGG)n	Simple_repeat	1	104	(0)	4522089
43	14.5	0.0	0.0	chrX	120309670	120309745	(35731150)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	4522742
16	12.1	3.6	0.0	chrX	120309745	120309772	(35731123)	+	(TG)n	Simple_repeat	1	29	(0)	4522743
16	16.0	4.5	2.2	chrX	120311471	120311514	(35729381)	+	(CCCT)n	Simple_repeat	1	46	(0)	4522745
18	25.3	1.6	9.4	chrX	120561550	120561674	(35479221)	+	GA-rich	Low_complexity	1	127	(0)	4523170
591	31.9	7.7	10.4	chrX	120575158	120575784	(35465111)	C	LTR104_Mam	LTR/Gypsy	(383)	1126	518	4523195
713	21.0	5.7	4.3	chrX	120575969	120576177	(35464718)	C	L1MDa	LINE/L1	(6166)	467	256	4523203
38	11.2	4.9	2.3	chrX	123961642	123961723	(32079172)	+	(CCCT)n	Simple_repeat	1	86	(0)	4527820
1255	18.8	2.6	8.9	chrX	124006992	124007315	(32033580)	C	AluJr	SINE/Alu	(8)	304	2	4527919
631	28.8	6.8	6.3	chrX	124007316	124007749	(32033146)	C	L1MC5a	LINE/L1	(1697)	1080	651	4527912
1723	19.8	4.1	0.8	chrX	128816914	128817290	(27223605)	+	MLT1A1	LTR/ERVL-MaLR	1	390	(18)	4533794
16	17.9	9.2	1.4	chrX	129522781	129522806	(26518089)	+	(AGGCGG)n	Simple_repeat	1	53	(18)	4534802
13	3.6	6.2	5.9	chrX	129522807	129522838	(26518057)	+	GA-rich	Low_complexity	1	34	(0)	4534803
16	17.9	9.2	1.4	chrX	129522839	129522845	(26518050)	+	(AGGCGG)n	Simple_repeat	54	71	(0)	4534802
19	15.3	0.0	4.3	chrX	129522954	129523002	(26517893)	+	(GCCCC)n	Simple_repeat	1	46	(0)	4534804
15	29.8	0.0	0.0	chrX	129523567	129523608	(26517287)	+	(CC)n	Simple_repeat	1	42	(0)	4534805
13	14.5	7.9	0.0	chrX	129655028	129655065	(26385830)	+	G-rich	Low_complexity	1	41	(0)	4535044
199	29.0	7.9	0.0	chrX	129655575	129655667	(26385228)	+	L2c	LINE/L2	3056	3156	(231)	4535045
22	20.1	4.2	2.7	chrX	129982405	129982476	(26058419)	+	(CTCC)n	Simple_repeat	1	75	(0)	4535724
17	4.9	0.0	0.0	chrX	129982601	129982621	(26058274)	+	(CA)n	Simple_repeat	1	21	(0)	4535725
18	16.8	0.0	0.0	chrX	130268800	130268834	(25772061)	+	GA-rich	Low_complexity	1	35	(0)	4536265
412	21.6	2.5	3.0	chrX	130402638	130402786	(25638109)	C	MIRc	SINE/MIR	(117)	151	5	4536501
538	28.3	0.0	0.0	chrX	130402920	130403039	(25637856)	C	MIRb	SINE/MIR	(34)	234	115	4536502
22	24.8	5.7	2.7	chrX	130718022	130718127	(25322768)	+	(CTCCCT)n	Simple_repeat	1	112	(0)	4537001
2061	9.1	3.5	0.0	chrX	131763457	131763708	(24277187)	C	AluSx1	SINE/Alu	(17)	295	35	4538455
246	28.1	0.0	0.0	chrX	132480774	132480837	(23560058)	C	Eulor5A	DNA?	(251)	65	2	4539404
3636	12.6	1.2	0.0	chrX	134006268	134006839	(22034056)	+	L1MB2	LINE/L1	5592	6170	(1)	4541941
774	15.4	2.5	0.0	chrX	134520851	134520967	(21519928)	C	FLAM_A	SINE/Alu	(22)	120	1	4542869
1684	23.9	10.4	4.4	chrX	134520972	134521429	(21519466)	+	MLT1H1	LTR/ERVL-MaLR	19	525	(30)	4542867
71	27.0	4.4	4.9	chrX	134796358	134796747	(21244148)	+	GA-rich	Low_complexity	1	407	(0)	4543385
15	15.5	0.0	0.0	chrX	134908437	134908466	(21132429)	+	(CCTCC)n	Simple_repeat	1	30	(0)	4543602
14	23.5	0.0	7.8	chrX	134915322	134915385	(21125510)	+	G-rich	Low_complexity	1	64	(0)	4543615
366	34.2	3.4	6.2	chrX	134915534	134915841	(21125054)	+	L2b	LINE/L2	2555	2853	(566)	4543616
18	21.6	2.1	0.0	chrX	135022461	135022508	(21018387)	+	(GCGCT)n	Simple_repeat	1	49	(0)	4543827
30	26.9	0.9	3.6	chrX	135521835	135521944	(20518951)	+	(CTC)n	Simple_repeat	1	111	(0)	4544494
12	28.9	0.0	3.7	chrX	136147377	136147430	(19893465)	+	(GCCCG)n	Simple_repeat	1	54	(0)	4545512
24	18.8	3.2	1.6	chrX	136147536	136147597	(19893298)	+	(CCG)n	Simple_repeat	1	64	(0)	4545513
459	33.6	16.2	2.5	chrX	139141370	139141872	(16899023)	+	L2c	LINE/L2	2784	3384	(3)	4550267
14	27.1	0.0	0.0	chrX	139933089	139933132	(16107763)	+	(CCCCG)n	Simple_repeat	1	44	(0)	4551411
43	28.4	1.7	3.4	chrX	140091612	140091784	(15949111)	+	GA-rich	Low_complexity	1	176	(0)	4551701
39	24.1	2.0	0.0	chrX	149010690	149010787	(7030108)	+	GA-rich	Low_complexity	1	100	(0)	4564084
13	25.1	0.0	2.3	chrX	149505177	149505220	(6535675)	+	(GCCGCA)n	Simple_repeat	1	44	(0)	4564708
15	19.4	0.0	4.4	chrX	149540682	149540726	(6500169)	+	(CCCTTC)n	Simple_repeat	1	45	(0)	4564765
15	23.8	0.0	0.0	chrX	149624346	149624382	(6416513)	+	G-rich	Low_complexity	1	37	(0)	4564857
2506	18.6	3.3	2.1	chrX	149949923	149950399	(6090496)	+	MER68B	LTR/ERVL	28	510	(54)	4565191
230	29.0	5.7	7.4	chrX	150036480	150036587	(6004308)	C	LTR90B	LTR	(0)	796	691	4565332
12	18.4	5.4	0.0	chrX	153335392	153335428	(2705467)	+	(CCTCAC)n	Simple_repeat	1	39	(0)	4570129
15	9.6	2.7	5.3	chrX	153382231	153382274	(2658621)	+	(GACAGA)n	Simple_repeat	1	42	(0)	4570194
12	10.0	9.4	0.0	chrX	153502349	153502380	(2538515)	+	(GGCAGG)n	Simple_repeat	1	35	(0)	4570340
24	21.9	2.2	5.5	chrX	153502382	153502470	(2538425)	+	(CTC)n	Simple_repeat	1	91	(0)	4570341
13	28.2	2.5	4.9	chrX	153643679	153643758	(2397137)	+	(GCGTGT)n	Simple_repeat	1	82	(0)	4570525
334	27.8	2.5	9.7	chrX	153643831	153644005	(2396890)	C	L2b	LINE/L2	(0)	3375	3214	4570526
11	26.1	0.0	4.3	chrX	153687554	153687599	(2353296)	+	G-rich	Low_complexity	1	46	(0)	4570607
16	31.1	1.2	3.5	chrX	153687786	153687869	(2353026)	+	(GGCG)n	Simple_repeat	1	85	(0)	4570608
19	12.2	2.8	0.0	chrX	153724921	153724956	(2315939)	+	GA-rich	Low_complexity	1	37	(0)	4570655
19	8.5	2.4	4.8	chrX	153766465	153766505	(2274390)	+	(CCTC)n	Simple_repeat	1	42	(0)	4570724
40	28.7	6.2	1.5	chrX	153970428	153970619	(2070276)	+	GA-rich	Low_complexity	1	204	(0)	4570994
452	28.5	20.3	5.7	chrX	154060460	154062454	(1978441)	C	L2a	LINE/L2	(0)	3426	992	4571174
11	21.2	0.0	2.9	chrX	154097219	154097253	(1943642)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	4571249
12	25.9	1.9	3.6	chrX	154369495	154369548	(1671347)	+	(CCCCA)n	Simple_repeat	1	55	(0)	4571753
944	11.4	0.8	0.0	chrX	154428206	154428336	(1612559)	+	FLAM_A	SINE/Alu	1	132	(10)	4571849
19	13.7	2.5	0.0	chrX	154428348	154428387	(1612508)	+	A-rich	Low_complexity	1	41	(0)	4571850
239	32.5	3.5	9.3	chrX	154527120	154527302	(1513593)	+	MIRc	SINE/MIR	10	181	(87)	4572014
1069	27.9	3.4	0.0	chrX	154548182	154548493	(1492402)	C	L2	LINE/L2	(398)	3021	2699	4572047
184	29.0	4.6	0.0	chrX	155026506	155026567	(1014328)	+	L2a	LINE/L2	3355	3419	(7)	4572775