2421	5.1	1.0	0.3	chr1	1907716	1908009	(247048413)	C	AluY	SINE/Alu	(15)	296	1	2602
2085	13.4	0.0	0.0	chr1	10114582	10114872	(238841550)	+	AluSz	SINE/Alu	1	291	(21)	15123
601	21.6	11.4	6.6	chr1	15081203	15081385	(233875037)	+	MER63A	DNA/hAT-Blackjack	1	193	(17)	24500
318	37.7	7.2	4.3	chr1	15081388	15081561	(233874861)	C	L2c	LINE/L2	(24)	3363	3193	24501
15	5.6	0.0	0.0	chr1	15834460	15834478	(233121944)	+	(T)n	Simple_repeat	1	19	(0)	26169
193	28.1	0.0	0.0	chr1	17711015	17711071	(231245351)	+	L2b	LINE/L2	3309	3365	(10)	30046
572	30.1	18.8	2.5	chr1	17711090	17711529	(231244893)	+	MLT1H1	LTR/ERVL-MaLR	4	531	(24)	30047
2043	13.5	1.0	0.0	chr1	17777710	17777997	(231178425)	C	AluSx	SINE/Alu	(21)	291	1	30210
206	27.1	18.8	5.5	chr1	19496464	19496682	(229459740)	+	L2c	LINE/L2	3093	3347	(40)	33752
578	32.8	10.8	3.9	chr1	21192445	21192661	(227763761)	+	MIRb	SINE/MIR	8	245	(23)	37347
2203	22.1	3.8	1.4	chr1	26936787	26937269	(222019153)	C	MER21C	LTR/ERVL	(33)	905	411	50510
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
622	26.4	3.5	1.0	chr1	29156443	29156637	(219799785)	C	MIR	SINE/MIR	(32)	230	31	56046
520	25.9	6.2	0.6	chr1	31726442	31726608	(217229814)	+	MIRb	SINE/MIR	50	226	(42)	61218
12	23.1	0.0	4.5	chr1	32870614	32870657	(216085765)	+	(CCCGCC)n	Simple_repeat	1	44	(0)	63922
9211	20.1	5.6	6.1	chr1	32923851	32926332	(216030090)	C	HERVS71-int	LTR/ERV1	(6507)	2471	4	64043
795	23.1	10.1	5.7	chr1	37100393	37100693	(211855729)	+	MLT1H	LTR/ERVL-MaLR	3	354	(195)	72107
224	31.6	3.0	6.7	chr1	42959491	42959595	(205996827)	+	L2c	LINE/L2	3085	3185	(202)	83432
340	31.1	4.0	5.1	chr1	43946011	43946186	(205010236)	+	MIRb	SINE/MIR	48	221	(47)	85205
19	17.2	0.0	0.0	chr1	44576856	44576894	(204379528)	+	(CTCAT)n	Simple_repeat	1	39	(0)	86294
1051	26.9	8.4	13.1	chr1	45994558	45994787	(202961635)	C	MER77B	LTR/ERVL	(498)	202	2	89157
36	31.5	2.1	3.5	chr1	46440143	46440335	(202516087)	+	G-rich	Low_complexity	1	197	(0)	90050
270	21.7	1.4	1.4	chr1	48102877	48102946	(200853476)	+	MIRb	SINE/MIR	5	74	(194)	92911
400	33.3	19.2	1.1	chr1	51877641	51878001	(197078421)	C	L3	LINE/CR1	(3)	4096	3655	99629
337	25.7	5.1	6.3	chr1	54307304	54307530	(194648892)	+	L2c	LINE/L2	3088	3334	(53)	104835
423	23.8	3.9	2.4	chr1	57624282	57624406	(191332016)	+	MIRb	SINE/MIR	33	159	(109)	111197
408	31.0	5.6	7.2	chr1	64474711	64475002	(184481420)	+	MamRTE1	LINE/RTE-BovB	3210	3496	(316)	123961
819	28.4	6.5	2.3	chr1	76055720	76056212	(172900210)	+	MLT1G1	LTR/ERVL-MaLR	1	469	(86)	140865
272	30.0	3.2	0.0	chr1	86207693	86207782	(162748640)	+	L3b	LINE/CR1	4789	4881	(351)	155284
2416	8.6	0.6	1.0	chr1	99971888	99972200	(148984222)	C	AluSq2	SINE/Alu	(1)	312	1	175726
217	35.6	8.6	4.0	chr1	99972201	99972315	(148984107)	+	L2c	LINE/L2	3183	3306	(81)	175724
2221	22.4	10.8	4.9	chr1	100785537	100786204	(148170218)	C	MER72	LTR/ERV1	(10)	712	1	177043
16	9.6	0.0	0.0	chr1	112713887	112713909	(136242513)	+	(A)n	Simple_repeat	1	23	(0)	193629
474	26.8	8.4	1.9	chr1	116919844	116919999	(132036423)	+	MIR3	SINE/MIR	38	204	(4)	200502
4969	6.8	1.2	1.1	chr1	148324194	148324833	(100631589)	C	Harlequin-int	LTR/ERV1	(5993)	903	263	215496
16	5.2	0.0	0.0	chr1	151144921	151144940	(97811482)	+	(AC)n	Simple_repeat	1	20	(0)	220601
2205	10.5	0.0	2.6	chr1	155048295	155048599	(93907823)	C	AluSx	SINE/Alu	(15)	297	1	227257
21938	18.5	6.2	5.6	chr1	155693985	155697375	(93259047)	C	HERVKC4-int	LTR/ERVK	(1313)	3949	525	228566
12	11.9	2.3	8.9	chr1	167617896	167617939	(81338483)	+	(CCACCC)n	Simple_repeat	1	45	(0)	246998
6014	9.2	0.7	3.0	chr1	171600924	171601846	(77354576)	+	Harlequin-int	LTR/ERV1	1	901	(5995)	253001
442	24.9	4.6	1.6	chr1	172150640	172150776	(76805646)	+	MIR	SINE/MIR	1	152	(116)	253856
2596	13.2	13.7	0.0	chr1	183346413	183346852	(65609570)	+	LTR54	LTR/ERV1	1	510	(0)	270973
519	31.8	5.5	1.3	chr1	201032271	201032496	(47923926)	C	L2c	LINE/L2	(47)	3340	3105	295398
2645	4.4	0.0	2.5	chr1	203625042	203625360	(45331062)	+	AluY	SINE/Alu	1	311	(0)	299981
1063	17.0	0.6	0.0	chr1	204158416	204158580	(44797842)	C	FRAM	SINE/Alu	(10)	166	1	301092
246	25.7	14.9	11.7	chr1	204578751	204579195	(44377227)	C	L2a	LINE/L2	(2)	3424	2924	301824
485	23.8	12.7	1.3	chr1	206834910	206835062	(42121360)	+	MIR	SINE/MIR	90	262	(0)	305783
369	32.0	12.1	1.3	chr1	221727385	221727539	(27228883)	+	MIR3	SINE/MIR	32	205	(3)	328083
1369	27.4	5.9	10.2	chr1	224542843	224543606	(24412816)	+	MER21C	LTR/ERVL	3	821	(117)	332759
183	26.8	9.0	2.7	chr1	228739900	228739972	(20216450)	C	L2c	LINE/L2	(42)	3345	3268	339126
183	23.4	4.1	2.1	chr1	228740042	228740089	(20216333)	C	L2c	LINE/L2	(241)	3146	3098	339126
255	34.0	5.0	10.3	chr1	229229155	229229387	(19727035)	C	MamSINE1	SINE/tRNA-RTE	(69)	221	2	339903
436	19.7	9.3	4.2	chr1	231523337	231523479	(17432943)	C	MLT1B	LTR/ERVL-MaLR	(220)	170	20	343639
1308	23.4	10.4	1.7	chr1	231523490	231523893	(17432529)	C	L2a	LINE/L2	(820)	2599	2157	343636
726	15.0	4.8	1.7	chr1	235047290	235047409	(13909013)	C	AluJr	SINE/Alu	(188)	124	1	348907
474	29.9	7.3	2.0	chr1	235047414	235047659	(13908763)	+	LTR78	LTR/ERV1	421	680	(624)	348908
1652	22.7	3.3	2.3	chr1	239262531	239262918	(9693504)	C	MLT1E1A	LTR/ERVL-MaLR	(16)	664	273	355843
512	29.1	12.5	2.4	chr10	6077139	6077469	(127719953)	C	LTR16A	LTR/ERVL	(76)	375	7	378857
714	28.5	6.1	2.3	chr10	6077477	6077821	(127719601)	C	ERV3-16A3_I-int	LTR/ERVL	(1)	5225	4867	378857
342	35.0	6.9	5.2	chr10	7590390	7590660	(126206762)	C	L1ME4a	LINE/L1	(68)	6056	5781	381269
338	29.5	8.5	9.2	chr10	30006311	30006605	(103790817)	C	L2b	LINE/L2	(12)	3363	3071	417891
2146	14.2	0.3	0.0	chr10	34706964	34707273	(99090149)	+	AluJb	SINE/Alu	1	311	(1)	425132
11	20.1	9.1	2.8	chr10	35127069	35127134	(98670288)	+	(GCCGGCT)n	Simple_repeat	1	72	(0)	426040
452	23.1	3.5	1.2	chr10	36024068	36024213	(97773209)	+	MLT1H2	LTR/ERVL-MaLR	413	586	(5)	427446
292	27.1	5.8	3.3	chr10	47242739	47242924	(86554498)	+	L4_B_Mam	LINE/RTE-X	4709	5050	(88)	438925
251	28.7	19.1	1.3	chr10	77300010	77300168	(56497254)	C	MER91A	DNA/hAT-Tip100	(2)	194	1	485664
532	28.0	10.7	0.5	chr10	78821195	78821395	(54976027)	+	MIRb	SINE/MIR	36	259	(9)	488532
479	20.8	17.2	6.5	chr10	79064412	79064462	(54732960)	+	MIRb	SINE/MIR	46	85	(183)	488992
2032	17.1	0.0	0.3	chr10	79064463	79064771	(54732651)	C	AluJb	SINE/Alu	(4)	308	1	488993
454	25.2	0.0	0.0	chr10	80416748	80416854	(53380568)	C	MER5A1	DNA/hAT-Charlie	(0)	166	60	491185
369	27.0	10.3	6.5	chr10	80612360	80612573	(53184849)	C	MLT1H	LTR/ERVL-MaLR	(164)	385	163	491511
5416	19.6	4.9	5.2	chr10	89687451	89687818	(44109604)	C	L1MC4a	LINE/L1	(3)	7879	7489	504815
10279	15.9	2.4	0.3	chr10	91092708	91094303	(42703119)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	506784
438	23.9	1.1	0.0	chr10	97307464	97307555	(36489867)	+	MLT1K	LTR/ERVL-MaLR	91	183	(412)	517682
325	26.3	13.6	2.2	chr10	97503683	97503818	(36293604)	C	L2c	LINE/L2	(1)	3386	3233	518112
455	32.3	8.6	3.5	chr10	98097562	98097956	(35699466)	+	L2c	LINE/L2	2933	3349	(38)	519368
184	29.1	0.0	8.1	chr10	100327063	100327148	(33470274)	+	L2c	LINE/L2	3288	3366	(21)	523161
369	31.1	8.0	6.7	chr10	100327139	100327348	(33470074)	+	L3	LINE/CR1	3882	4094	(5)	523164
526	26.9	5.8	3.5	chr10	104333925	104334124	(29463298)	C	MIRb	SINE/MIR	(34)	234	30	530543
1153	28.1	3.5	9.1	chr10	110237965	110238426	(23558996)	C	MER21C	LTR/ERVL	(367)	571	137	539158
461	23.7	13.7	1.8	chr10	110461705	110461867	(23335555)	+	MIR	SINE/MIR	36	221	(47)	539559
377	23.0	4.6	3.9	chr10	118793616	118793802	(15003620)	+	MLT1H2	LTR/ERVL-MaLR	1	175	(374)	552611
254	33.6	2.3	4.2	chr10	119495054	119495209	(14302213)	+	L2a	LINE/L2	3236	3426	(0)	554001
442	31.9	15.5	2.0	chr10	119510255	119510648	(14286774)	+	L2b	LINE/L2	2919	3375	(0)	554032
1126	17.2	0.9	3.0	chr10	125163887	125164120	(8633302)	+	L1M3	LINE/L1	5300	5528	(652)	563057
290	22.9	10.3	3.9	chr10	132321253	132321379	(1476043)	+	MLT1B	LTR/ERVL-MaLR	393	528	(21)	571524
323	17.0	0.9	13.8	chr10	132717122	132717244	(1080178)	C	MLT1A	LTR/ERVL-MaLR	(147)	227	121	571924
2950	20.7	6.0	5.1	chr10	133375307	133376125	(421297)	+	L1MB7	LINE/L1	5105	6061	(123)	572457
481	26.2	9.8	2.2	chr11	368467	368739	(134717883)	+	MLT1G	LTR/ERVL-MaLR	291	586	(5)	573333
973	19.3	6.7	11.7	chr11	879374	879690	(134206932)	+	MLT1B	LTR/ERVL-MaLR	90	389	(1)	574049
102	29.3	1.0	0.9	chr11	1446202	1446480	(133640142)	+	G-rich	Low_complexity	32	312	(0)	574617
552	28.5	6.2	8.7	chr11	35593128	35593461	(99493161)	+	MLT1H	LTR/ERVL-MaLR	140	464	(85)	627002
12	10.4	6.1	2.9	chr11	44703220	44703252	(90383370)	+	(TCCTCT)n	Simple_repeat	1	35	(0)	640650
2350	9.1	0.3	0.7	chr11	44730625	44730922	(90355700)	C	AluSx3	SINE/Alu	(13)	298	2	640722
1774	9.5	9.6	3.9	chr11	62750084	62750195	(72336427)	C	AluSq2	SINE/Alu	(180)	133	3	662707
360	31.6	4.9	5.7	chr11	62750215	62750462	(72336160)	+	MIRb	SINE/MIR	19	264	(4)	662709
2027	25.1	12.9	4.8	chr11	70280873	70281872	(64804750)	C	L1ME3A	LINE/L1	(5158)	2175	1366	676602
2257	10.5	0.3	0.0	chr11	71972905	71973198	(63113424)	+	AluSp	SINE/Alu	1	295	(18)	679099
490	30.7	9.3	0.4	chr11	73144000	73144225	(61942397)	+	MIRb	SINE/MIR	7	254	(14)	681265
1219	25.0	13.9	4.3	chr11	111555941	111556614	(23530008)	C	MER77B	LTR/ERVL	(121)	817	1	741537
1649	15.1	16.3	5.0	chr11	113615139	113615500	(21471122)	+	LTR57	LTR/ERVL	1	411	(0)	744868
28	22.3	1.4	0.0	chr11	114232593	114232661	(20853961)	+	G-rich	Low_complexity	1	70	(0)	745945
226	27.0	1.6	0.0	chr11	115848241	115848303	(19238319)	C	MLT1N2	LTR/ERVL-MaLR	(366)	196	133	748330
740	21.0	0.0	0.0	chr11	116977257	116977380	(18109242)	C	AluJo	SINE/Alu	(188)	124	1	750254
14	15.0	5.4	0.0	chr11	120703544	120703580	(14383042)	+	(AGGAGTA)n	Simple_repeat	1	39	(0)	757019
651	28.4	2.4	0.5	chr11	130076714	130076922	(5009700)	C	MLT1L	LTR/ERVL-MaLR	(250)	360	148	771331
3203	10.4	7.2	1.7	chr12	1720303	1720773	(131554536)	C	MER1A	DNA/hAT-Charlie	(30)	499	1	781159
2320	10.2	1.0	0.0	chr12	6489317	6489620	(126785689)	C	AluSp	SINE/Alu	(6)	307	1	788822
799	30.5	5.2	4.0	chr12	6489621	6489798	(126785511)	+	HERV16-int	LTR/ERVL	2553	2731	(2265)	788820
844	29.4	3.4	0.4	chr12	31630023	31630254	(101645055)	C	MIR	SINE/MIR	(18)	244	6	825670
37	8.0	0.0	0.0	chr12	47904085	47904137	(85371172)	+	(GAG)n	Simple_repeat	1	53	(0)	844399
19	24.0	0.0	0.0	chr12	48692358	48692401	(84582908)	+	(AC)n	Simple_repeat	1	44	(0)	845563
4230	8.7	3.1	0.7	chr12	52260137	52260702	(81014607)	C	LTR19B	LTR/ERV1	(0)	580	1	852712
17	22.0	2.3	0.0	chr12	54032808	54032851	(79242458)	+	(TCCC)n	Simple_repeat	1	45	(0)	855768
21	3.8	0.0	3.5	chr12	54063104	54063132	(79212177)	+	(CT)n	Simple_repeat	1	29	(0)	855795
41	0.0	0.0	0.0	chr12	54063133	54063167	(79212142)	+	(CA)n	Simple_repeat	1	35	(0)	855796
29	0.0	0.0	0.0	chr12	57772207	57772234	(75503075)	+	(GCTGG)n	Simple_repeat	1	28	(0)	861800
737	24.5	3.2	7.5	chr12	69067025	69067087	(64208222)	+	MIRb	SINE/MIR	16	78	(190)	878613
404	32.9	4.2	1.4	chr12	76963279	76963485	(56311824)	C	LTR79	LTR/ERVL	(314)	213	1	890168
551	26.8	8.3	1.5	chr12	89358914	89359114	(43916195)	+	MIR	SINE/MIR	15	230	(32)	906889
559	31.1	8.3	3.7	chr12	95351945	95352241	(37923068)	+	L1MEi	LINE/L1	367	678	(1534)	917045
255	28.6	7.2	0.0	chr12	105113146	105113222	(28162087)	C	X7A_LINE	LINE/CR1	(99)	168	86	933865
450	24.4	2.2	1.5	chr12	109545491	109545623	(23729686)	C	MIRb	SINE/MIR	(107)	161	28	942710
240	29.3	12.3	0.7	chr12	109864576	109864703	(23410606)	C	MIRc	SINE/MIR	(135)	133	1	943516
1183	14.8	5.3	0.5	chr12	112403747	112403942	(20871367)	C	AluJr	SINE/Alu	(22)	290	85	949126
1164	23.9	7.7	0.9	chr12	113016713	113017037	(20258272)	+	MLT1E2	LTR/ERVL-MaLR	158	506	(121)	950584
1154	16.3	5.7	1.7	chr12	113017074	113017310	(20257999)	C	MLT1D	LTR/ERVL-MaLR	(258)	247	1	950586
309	29.2	0.0	0.9	chr12	113544521	113544627	(19730682)	C	MLT1H	LTR/ERVL-MaLR	(4)	485	380	951853
680	32.8	5.4	6.0	chr12	113544648	113544981	(19730328)	C	MLT1H	LTR/ERVL-MaLR	(195)	354	23	951853
901	25.8	2.2	6.2	chr12	115400430	115400718	(17874591)	C	L1MD2	LINE/L1	(42)	6317	6041	955931
226	32.3	4.8	3.9	chr12	115400762	115400804	(17874505)	+	MIR	SINE/MIR	41	88	(174)	955932
2284	11.6	1.4	0.0	chr12	115400805	115401096	(17874213)	+	AluSc8	SINE/Alu	1	296	(15)	955933
272	31.6	6.8	7.2	chr12	120258596	120258778	(13016531)	C	L1ME2z	LINE/L1	(3)	6441	6253	966540
1279	23.0	19.0	2.9	chr12	121026376	121026569	(12248740)	C	LTR16C	LTR/ERVL	(0)	489	274	968412
677	21.2	0.7	0.0	chr12	121894160	121894296	(11381013)	C	L1ME4b	LINE/L1	(10)	882	745	970609
225	35.8	0.7	6.8	chr12	129470426	129470587	(3804722)	C	MIRb	SINE/MIR	(12)	256	105	985094
1779	15.9	2.7	0.0	chr12	132033543	132033831	(1241478)	C	AluJo	SINE/Alu	(15)	297	1	989008
1772	19.3	5.8	3.2	chr13	34465610	34466143	(79898185)	+	MLT2A2	LTR/ERVL	1	554	(0)	1015815
2209	27.2	13.5	6.0	chr13	36629942	36631424	(77732904)	+	HAL1	LINE/L1	3	1632	(875)	1018817
278	21.0	9.8	20.2	chr13	60788204	60788376	(53575952)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	397	1053995
7616	23.6	3.2	7.5	chr13	72219942	72222100	(42142228)	C	L1MA4A	LINE/L1	(4775)	2074	11	1068503
925	27.2	5.7	4.8	chr13	88246458	88247079	(26117249)	C	L1MCc	LINE/L1	(3995)	3027	2400	1090076
1179	23.7	11.6	0.0	chr13	111315750	111316154	(3048174)	C	MLT1C	LTR/ERVL-MaLR	(9)	458	1	1122391
1108	26.0	6.9	5.6	chr14	22764367	22764854	(84278864)	C	MLT1G1	LTR/ERVL-MaLR	(39)	540	5	1131667
493	30.0	5.5	2.6	chr14	33009635	33009829	(74033889)	C	MIRb	SINE/MIR	(34)	234	34	1145880
281	30.1	11.8	1.6	chr14	33009899	33010089	(74033629)	+	MIRb	SINE/MIR	90	252	(16)	1145881
723	34.3	5.1	2.3	chr14	33808418	33808654	(73235064)	C	L3	LINE/CR1	(472)	3627	3386	1146766
347	28.5	5.9	0.0	chr14	36997894	36998048	(70045670)	C	MIR	SINE/MIR	(69)	193	33	1152326
755	27.6	9.6	1.1	chr14	36998071	36998337	(70045381)	+	MER103C	DNA/hAT-Charlie	6	297	(0)	1152327
958	25.0	10.2	5.2	chr14	50978346	50978855	(56064863)	+	L2a	LINE/L2	2873	3426	(0)	1170784
30	5.5	0.0	0.0	chr14	68548294	68548331	(38495387)	+	(GCCCA)n	Simple_repeat	1	38	(0)	1197866
1624	12.5	4.1	2.4	chr14	74916407	74916695	(32127023)	+	AluJb	SINE/Alu	4	297	(15)	1209390
474	29.2	7.5	4.7	chr15	42152109	42152495	(59838694)	+	MLT1H	LTR/ERVL-MaLR	26	576	(3)	1294645
1995	24.0	15.6	2.4	chr15	67032412	67033120	(34958069)	+	L2a	LINE/L2	2561	3421	(5)	1335932
231	29.4	5.2	3.2	chr15	67033119	67033213	(34957976)	C	MIR	SINE/MIR	(157)	105	9	1335935
11733	14.5	5.5	2.6	chr15	68893351	68894841	(33096348)	C	L1MCa	LINE/L1	(4969)	1539	1	1339255
369	35.0	3.1	0.1	chr15	69814117	69814313	(32176876)	C	MIRb	SINE/MIR	(23)	245	33	1340951
225	26.2	1.2	4.8	chr15	70699993	70700076	(31291113)	C	MIRb	SINE/MIR	(84)	184	104	1342599
315	33.9	10.0	1.1	chr15	72968847	72969028	(29022161)	+	MIRb	SINE/MIR	46	245	(23)	1346390
2346	10.1	0.3	0.0	chr15	75415570	75415875	(26575314)	+	AluSp	SINE/Alu	1	307	(6)	1350738
1894	19.9	9.3	0.7	chr15	75901964	75902412	(26088777)	C	LTR75_1	LTR/ERV1	(1)	545	54	1351714
789	16.8	3.0	0.0	chr15	75902417	75902547	(26088642)	+	FLAM_C	SINE/Alu	1	135	(8)	1351715
17	4.9	0.0	0.0	chr15	82046770	82046790	(19944399)	+	(CG)n	Simple_repeat	1	21	(0)	1362237
344	26.5	7.7	0.1	chr15	90552566	90552719	(11438470)	+	MIRb	SINE/MIR	13	172	(90)	1376605
556	17.8	1.0	0.0	chr15	101127638	101127738	(863451)	C	LTR67B	LTR/ERVL	(3)	617	516	1392364
541	24.7	3.8	0.7	chr15	101127829	101127983	(863206)	C	LTR67B	LTR/ERVL	(276)	344	185	1392364
591	28.1	9.6	4.9	chr15	101140662	101140949	(850240)	C	MLT1J	LTR/ERVL-MaLR	(203)	309	7	1392383
1145	27.9	9.6	7.5	chr16	2385110	2385807	(87952538)	C	MER77B	LTR/ERVL	(146)	792	28	1397327
397	20.0	10.3	4.5	chr16	4945137	4945246	(85393099)	C	MamRep38	DNA/hAT	(21)	274	158	1402200
47	0.0	3.4	0.0	chr16	24020971	24021029	(66317316)	+	(TTTC)n	Simple_repeat	1	61	(0)	1443689
240	25.4	0.0	1.7	chr16	25163781	25163840	(65174505)	C	L1ME3G	LINE/L1	(2219)	558	500	1446344
246	17.2	1.7	3.3	chr16	25163856	25163915	(65174430)	C	MLT1H	LTR/ERVL-MaLR	(91)	458	400	1446345
219	31.8	5.8	8.0	chr16	50956634	50956855	(39381490)	C	MIRc	SINE/MIR	(31)	237	24	1473468
1028	22.2	17.9	2.1	chr16	50956869	50957200	(39381145)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1473469
364	20.7	13.0	1.1	chr16	57096206	57096293	(33242052)	+	MLT1C	LTR/ERVL-MaLR	338	437	(30)	1484340
2637	22.4	5.4	9.2	chr16	58247917	58248778	(32089567)	C	ERV3-16A3_I-int	LTR/ERVL	(1604)	3622	2795	1486725
436	28.8	11.3	5.4	chr16	58248789	58249012	(32089333)	C	MamTip3	DNA/hAT-Tip100	(147)	353	115	1486727
191	28.9	0.0	0.0	chr16	58727486	58727530	(31610815)	C	L2c	LINE/L2	(38)	3349	3305	1487725
1973	15.5	2.3	0.0	chr16	67047787	67048082	(23290263)	+	AluSq	SINE/Alu	1	303	(10)	1500958
7233	17.2	14.7	2.1	chr16	67141398	67142927	(23195418)	C	MER52A	LTR/ERV1	(0)	1755	1	1501175
273	14.1	12.3	0.0	chr16	67888774	67888837	(22449508)	+	L2a	LINE/L2	3351	3423	(3)	1502528
243	28.7	11.4	1.0	chr16	68951423	68951524	(21386821)	C	MIRb	SINE/MIR	(99)	169	56	1504734
279	33.1	9.1	0.6	chr16	86355777	86355958	(3982387)	+	L1ME4a	LINE/L1	5898	6096	(28)	1536500
900	29.3	4.9	5.7	chr16	86356010	86356360	(3981985)	C	MLT1H	LTR/ERVL-MaLR	(192)	357	10	1536501
12	17.4	0.0	5.6	chr16	86442938	86442973	(3895372)	+	(CCAGC)n	Simple_repeat	1	36	(0)	1536676
11	10.6	0.0	10.5	chr16	87317335	87317372	(3020973)	+	(AACCC)n	Simple_repeat	1	38	(0)	1538230
13	4.7	0.0	4.2	chr16	87317392	87317415	(3020930)	+	(CGCC)n	Simple_repeat	1	24	(0)	1538231
2424	18.4	11.0	2.2	chr16	88048963	88049702	(2288643)	C	MER21A	LTR/ERVL	(1)	930	1	1539485
1951	14.2	1.4	0.3	chr16	88752201	88752489	(1585856)	+	AluJo	SINE/Alu	1	292	(20)	1540389
620	28.4	2.3	3.2	chr16	88752490	88752524	(1585821)	+	L1MB3	LINE/L1	6153	6181	(2)	1540388
27	23.2	0.0	1.4	chr16	88752580	88752651	(1585694)	+	G-rich	Low_complexity	1	72	(0)	1540390
20	0.0	0.0	0.0	chr16	88786114	88786135	(1552210)	+	(A)n	Simple_repeat	1	22	(0)	1540424
2093	8.1	1.0	6.2	chr16	88786141	88786287	(1552058)	+	AluSq2	SINE/Alu	4	136	(177)	1540425
291	36.9	4.8	4.5	chr17	539750	539969	(82717472)	C	MIRb	SINE/MIR	(16)	252	29	1545337
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
40	6.6	0.0	0.0	chr17	4715471	4715518	(78541923)	+	(AC)n	Simple_repeat	1	48	(0)	1553597
32	10.7	0.0	0.0	chr17	4715555	4715604	(78541837)	+	(AC)n	Simple_repeat	1	50	(0)	1553597
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
1480	24.9	10.6	9.3	chr17	8791815	8792522	(74464919)	+	MER77B	LTR/ERVL	28	780	(151)	1561475
216	18.8	5.9	5.9	chr17	20172409	20172493	(63084948)	+	L2b	LINE/L2	3097	3181	(194)	1582089
432	22.6	5.7	2.2	chr17	29598186	29598321	(53659120)	+	MamRep4096	DNA/hAT-Tip100	9	149	(277)	1590976
23	24.4	0.0	8.8	chr17	32928028	32928141	(50329300)	+	G-rich	Low_complexity	1	114	(0)	1597648
577	34.4	3.5	0.9	chr17	33285665	33285890	(49971551)	+	MIRb	SINE/MIR	18	249	(19)	1598351
256	37.4	7.9	0.0	chr17	39678097	39678283	(43579158)	C	L3b	LINE/CR1	(119)	5113	4911	1610561
333	22.6	5.1	0.5	chr17	39719650	39719745	(43537696)	+	MIRc	SINE/MIR	115	216	(14)	1610654
509	27.6	9.1	1.4	chr17	50684987	50685199	(32572242)	C	MIRb	SINE/MIR	(4)	264	34	1632242
239	30.9	7.2	10.4	chr17	57184248	57184478	(26072963)	C	L1ME2	LINE/L1	(5980)	420	198	1642817
237	32.5	11.6	3.2	chr17	67247331	67247581	(16009860)	+	L2a	LINE/L2	2662	2936	(483)	1661593
40	0.0	0.0	0.0	chr17	70655109	70655142	(12602299)	+	(GT)n	Simple_repeat	1	34	(0)	1667626
320	31.8	8.9	0.0	chr17	72575556	72575709	(10681732)	+	MIRb	SINE/MIR	30	198	(70)	1670629
1930	15.2	4.7	0.3	chr17	77018354	77018702	(6238739)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1679253
2605	21.6	10.5	7.4	chr17	77018703	77018796	(6238645)	+	MER21C	LTR/ERVL	830	896	(42)	1679250
324	19.9	14.6	4.6	chr17	78142162	78142314	(5115127)	C	MER5B	DNA/hAT-Charlie	(2)	176	6	1681261
830	17.7	0.0	0.8	chr17	81864108	81864237	(1393204)	C	FLAM_C	SINE/Alu	(14)	129	1	1686841
13	14.4	3.2	0.0	chr18	23586439	23586469	(56786816)	+	(GCAGGA)n	Simple_repeat	1	32	(0)	1716472
2225	7.2	0.4	0.4	chr18	26649501	26649779	(53723506)	C	AluSx3	SINE/Alu	(4)	307	29	1721293
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
477	31.1	7.5	5.3	chr18	54776188	54776526	(25596759)	+	LTR84b	LTR/ERVL	414	760	(1)	1761747
432	26.4	3.2	1.6	chr18	63111539	63111661	(17261624)	+	MIRb	SINE/MIR	144	268	(0)	1774573
11582	9.9	1.2	1.7	chr18	70236426	70240144	(10133141)	+	L1P3	LINE/L1	8	3742	(2719)	1784254
498	13.4	0.0	0.0	chr19	4773468	4773534	(53844082)	+	AluSz	SINE/Alu	1	67	(245)	1806419
2422	7.7	0.3	1.9	chr19	10323867	10324179	(48293437)	+	AluSp	SINE/Alu	1	308	(5)	1819450
1511	14.3	0.0	14.6	chr19	10884365	10884486	(47733130)	C	AluJo	SINE/Alu	(194)	118	1	1820921
18	4.5	0.0	0.0	chr19	13026722	13026744	(45590872)	+	(CT)n	Simple_repeat	1	23	(0)	1825778
29	0.0	0.0	0.0	chr19	13026745	13026769	(45590847)	+	(TG)n	Simple_repeat	1	25	(0)	1825779
4071	7.9	2.0	2.9	chr19	16823253	16823410	(41794206)	+	MER41A	LTR/ERV1	1	155	(399)	1834900
405	24.5	11.9	1.3	chr19	19432924	19433080	(39184536)	C	L2b	LINE/L2	(732)	2687	2512	1840979
6724	11.2	0.8	1.8	chr19	28414223	28415397	(30202219)	C	L1MA1	LINE/L1	(2)	6300	5137	1848734
351	26.3	9.8	3.7	chr19	30069443	30069562	(28548054)	C	L2b	LINE/L2	(21)	3366	3215	1851352
2238	8.9	0.0	4.8	chr19	33138039	33138351	(25479265)	C	AluSq2	SINE/Alu	(15)	298	1	1856259
254	35.6	0.9	0.0	chr19	35264715	35264854	(23352762)	+	MIR	SINE/MIR	102	242	(20)	1860056
2319	10.7	0.3	0.0	chr19	35800239	35800548	(22817068)	C	AluSz	SINE/Alu	(1)	311	1	1861166
492	30.3	15.7	4.6	chr19	36119910	36120296	(22497320)	+	L2a	LINE/L2	2898	3426	(0)	1861908
49	0.0	0.0	0.0	chr19	42303065	42303106	(16314510)	+	(GT)n	Simple_repeat	1	42	(0)	1874978
2506	27.1	5.2	1.5	chr19	44019073	44019341	(14598275)	+	ERVL-B4-int	LTR/ERVL	3274	3559	(2155)	1878064
2268	11.1	0.0	0.0	chr19	45702482	45702778	(12914838)	+	AluSx	SINE/Alu	1	297	(15)	1882042
13	27.4	1.9	1.8	chr19	45902621	45902674	(12714942)	+	(TCCCCCC)n	Simple_repeat	1	55	(0)	1882531
641	26.1	8.1	0.1	chr19	55677166	55677362	(2940254)	+	MIR	SINE/MIR	26	240	(22)	1904281
2337	7.8	1.0	0.0	chr19	58543417	58543711	(73905)	C	AluSq2	SINE/Alu	(15)	298	1	1909716
564	25.6	0.7	0.0	chr19	58543719	58543855	(73761)	C	AluJb	SINE/Alu	(39)	273	136	1909717
349	33.6	1.9	0.0	chr2	23921386	23921489	(218272040)	+	L4_B_Mam	LINE/RTE-X	4098	4203	(738)	1945104
271	25.7	0.0	0.0	chr2	47644610	47644679	(194548850)	C	MER5A1	DNA/hAT-Charlie	(21)	145	76	1984460
1325	21.6	3.9	3.8	chr2	47644714	47645097	(194548432)	C	MLT1B	LTR/ERVL-MaLR	(3)	405	2	1984461
1008	28.7	10.6	1.4	chr2	61620867	61621257	(180572272)	C	MLT1G	LTR/ERVL-MaLR	(14)	541	129	2004765
875	26.1	10.9	6.4	chr2	61961578	61962268	(180231261)	C	HAL1	LINE/L1	(1181)	1326	601	2005567
857	24.5	8.2	15.0	chr2	61962269	61962878	(180230651)	+	MER77B	LTR/ERVL	9	538	(162)	2005568
1065	9.0	0.0	0.0	chr2	65359648	65359781	(176833748)	+	AluYi6	SINE/Alu	1	134	(177)	2011110
1118	23.4	14.2	10.2	chr2	99481882	99482571	(142710958)	+	MER21C	LTR/ERVL	24	811	(127)	2056529
311	29.9	12.0	3.1	chr2	102484393	102484551	(139708978)	+	MIR	SINE/MIR	84	258	(4)	2061138
18	27.0	1.9	0.0	chr2	109169691	109169743	(133023786)	+	(TA)n	Simple_repeat	1	54	(0)	2070378
2399	6.3	0.0	6.9	chr2	109522271	109522603	(132670926)	C	AluSq10	SINE/Alu	(3)	310	1	2070795
533	6.6	0.0	0.0	chr2	109522613	109522673	(132670856)	C	AluJo	SINE/Alu	(219)	93	33	2070796
1824	16.0	7.7	0.0	chr2	132790293	132790630	(109402899)	C	MER47A	DNA/TcMar-Tigger	(0)	366	1	2105061
922	11.1	1.8	6.4	chr2	135993502	135993617	(106199912)	+	MER5A	DNA/hAT-Charlie	52	165	(24)	2109980
193	5.4	14.0	0.0	chr2	135993647	135993683	(106199846)	+	MIRc	SINE/MIR	44	86	(182)	2109982
1021	26.0	2.1	0.0	chr2	149311977	149312257	(92881272)	+	L1MEc	LINE/L1	3011	3297	(3022)	2127894
264	19.2	5.2	5.2	chr2	149312281	149312357	(92881172)	+	MIR	SINE/MIR	76	152	(110)	2127895
345	29.3	13.4	4.4	chr2	152869379	152869560	(89323969)	+	MIR	SINE/MIR	31	231	(31)	2133084
292	35.5	4.3	0.0	chr2	154532737	154532846	(87660683)	C	MIR3	SINE/MIR	(49)	159	45	2135084
16	16.5	0.0	0.0	chr2	160288423	160288449	(81905080)	+	A-rich	Low_complexity	1	27	(0)	2142874
387	32.2	5.5	4.0	chr2	163697621	163697882	(78495647)	+	MIRb	SINE/MIR	1	260	(2)	2147345
33508	17.0	0.9	1.0	chr2	199224101	199230083	(42963446)	C	HERVL18-int	LTR/ERVL	(0)	6047	1	2196571
447	34.0	11.5	0.6	chr2	199278014	199278298	(42915231)	C	L2a	LINE/L2	(97)	3290	2977	2196623
483	29.0	6.5	7.6	chr2	206260612	206260966	(35932563)	C	ERV24_Prim-int	LTR/ERV1	(4348)	3227	2877	2208347
978	28.1	4.7	2.0	chr2	226609335	226609799	(15583730)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	2	2239173
461	27.8	8.6	5.9	chr2	227052927	227053129	(15140400)	+	MER63A	DNA/hAT-Blackjack	2	210	(0)	2239848
1481	10.3	22.8	0.0	chr2	227227315	227227547	(14965982)	+	AluSz	SINE/Alu	1	302	(10)	2240116
807	15.3	0.7	1.5	chr2	231723104	231723240	(10470289)	+	AluJo	SINE/Alu	1	136	(176)	2247500
357	19.1	13.4	0.0	chr20	1210171	1210276	(63233891)	C	MLT1G	LTR/ERVL-MaLR	(229)	366	229	2264621
377	31.4	1.4	0.7	chr20	1210287	1210424	(63233743)	C	MLT1M	LTR/ERVL-MaLR	(337)	335	197	2264622
342	19.5	1.3	1.4	chr20	1470141	1470236	(62973931)	+	LTR60	LTR/ERV1	1	92	(673)	2265062
1008	24.1	6.5	6.7	chr20	1470345	1470425	(62973742)	+	LTR43B	LTR/ERV1	131	233	(339)	2265063
1923	23.2	6.1	2.5	chr20	4829673	4830193	(59613974)	+	MLT1H	LTR/ERVL-MaLR	7	547	(2)	2271405
844	20.2	11.7	4.0	chr20	10006053	10006304	(54437863)	C	MER74A	LTR/ERVL	(284)	274	1	2279827
3763	12.8	4.9	1.0	chr20	10352221	10352804	(54091363)	C	LTR35	LTR/ERV1	(0)	608	1	2280395
901	21.4	4.7	7.8	chr20	18477833	18478104	(45966063)	C	MER77B	LTR/ERVL	(319)	381	99	2292735
280	39.5	6.2	3.7	chr20	31868136	31868322	(32575845)	C	L2b	LINE/L2	(6)	3369	3178	2307054
505	26.3	16.2	9.6	chr20	34629322	34629700	(29814467)	+	MLT1H	LTR/ERVL-MaLR	142	549	(0)	2313479
265	20.4	5.8	3.5	chr20	41003467	41003552	(23440615)	C	MIR3	SINE/MIR	(78)	152	69	2326872
1843	22.4	8.5	5.3	chr20	43183534	43184122	(21260045)	C	L1MB7	LINE/L1	(39)	6145	5536	2330606
429	27.3	5.0	11.5	chr20	43923728	43924137	(20520030)	C	LTR16	LTR/ERVL	(0)	438	57	2332266
371	36.0	7.0	5.3	chr20	45092739	45093020	(19351147)	+	L2b	LINE/L2	3037	3323	(52)	2334995
471	28.1	6.6	0.6	chr20	46171993	46172164	(18272003)	+	MIRb	SINE/MIR	7	189	(79)	2337093
406	30.4	10.3	3.6	chr20	49448088	49448476	(14995691)	+	MLT1K	LTR/ERVL-MaLR	160	577	(18)	2344447
1350	26.0	10.1	1.4	chr20	50590942	50591525	(13852642)	+	L1MC5	LINE/L1	8663	9303	(1)	2347243
392	28.1	8.2	0.0	chr20	57130110	57130255	(7313912)	+	MLT1H2	LTR/ERVL-MaLR	87	245	(244)	2360606
277	27.8	7.1	5.2	chr21	35112214	35112332	(11597651)	C	MIR1_Amn	SINE/MIR	(34)	174	59	2407631
2134	9.8	4.3	0.3	chr21	35961702	35961988	(10747995)	C	AluSz	SINE/Alu	(13)	299	1	2408907
639	31.4	6.2	5.9	chr21	36676478	36676765	(10033218)	+	HAL1	LINE/L1	475	763	(1744)	2410315
1647	14.3	2.2	7.3	chr21	42048833	42049161	(4660822)	+	AluJo	SINE/Alu	1	312	(0)	2418367
692	21.4	6.5	0.0	chr21	42779559	42779745	(3930238)	+	MLT1B	LTR/ERVL-MaLR	1	200	(190)	2419304
4395	7.2	0.3	0.3	chr21	42932808	42933394	(3776589)	+	Harlequin-int	LTR/ERV1	263	849	(6047)	2419593
379	27.5	4.5	2.6	chr22	23610085	23610237	(27208231)	+	L2	LINE/L2	1958	2113	(1306)	2438604
256	36.4	3.1	3.5	chr22	25472203	25472543	(25345925)	C	L2c	LINE/L2	(304)	3083	2746	2442275
1783	19.7	2.0	0.3	chr22	25557415	25557708	(25260760)	+	AluJb	SINE/Alu	2	300	(12)	2442483
422	33.3	7.8	1.7	chr22	26616689	26616931	(24201537)	C	MIR	SINE/MIR	(0)	268	6	2444763
559	25.5	17.2	1.0	chr22	29128666	29128862	(21689606)	C	MIRb	SINE/MIR	(11)	257	19	2449940
981	23.7	1.1	3.8	chr22	35589613	35589650	(15228818)	C	L1MB8	LINE/L1	(25)	6153	6122	2463375
1797	15.7	5.2	1.7	chr22	35589651	35589944	(15228524)	+	AluJr	SINE/Alu	1	305	(7)	2463376
2078	7.2	3.6	0.0	chr22	36481703	36481993	(14336475)	C	AluSc	SINE/Alu	(0)	309	5	2465157
213	27.4	7.9	3.0	chr22	36489470	36489601	(14328867)	+	MIRb	SINE/MIR	84	222	(46)	2465174
719	19.6	1.3	2.5	chr22	36969444	36969600	(13848868)	+	MER67D	LTR/ERV1	3	157	(357)	2466210
15	4.8	0.0	0.0	chr22	37368280	37368301	(13450167)	+	(GAGG)n	Simple_repeat	1	22	(0)	2467074
356	23.7	9.2	1.3	chr22	38338958	38339114	(12479354)	C	MIRb	SINE/MIR	(12)	250	65	2469309
15	20.5	2.9	0.0	chr22	40397200	40397233	(10421235)	+	(TA)n	Simple_repeat	1	35	(0)	2473493
336	30.5	11.2	4.9	chr22	42297984	42298166	(8520302)	C	MIRc	SINE/MIR	(41)	227	32	2477750
435	30.8	2.1	4.6	chr22	45600033	45600226	(5218242)	+	L3	LINE/CR1	3899	4087	(12)	2484226
194	38.2	1.3	0.0	chr22	48586387	48586462	(2232006)	+	MIRc	SINE/MIR	80	156	(112)	2488412
940	27.6	17.6	2.8	chr22	49879921	49880662	(937806)	C	L1MEc	LINE/L1	(5489)	911	37	2489888
204	29.1	1.2	7.1	chr3	9987369	9987453	(188308106)	+	MIRb	SINE/MIR	118	197	(71)	2508420
800	28.7	9.6	7.8	chr3	11648656	11649411	(186646148)	+	L1ME4a	LINE/L1	5256	6026	(98)	2511792
22169	9.2	2.0	1.5	chr3	31043678	31047417	(167248142)	+	MER61-int	LTR/ERV1	1411	5217	(0)	2541469
19	3.8	0.0	0.0	chr3	32382066	32382092	(165913467)	+	(TGTTT)n	Simple_repeat	1	27	(0)	2543769
303	26.9	21.2	0.0	chr3	32382214	32382358	(165913201)	C	MIRb	SINE/MIR	(65)	203	20	2543770
602	18.3	12.3	0.7	chr3	42257187	42257329	(156038230)	+	MER5A1	DNA/hAT-Charlie	4	165	(1)	2558798
20	9.2	2.9	0.0	chr3	49461846	49461880	(148833679)	+	(CCT)n	Simple_repeat	1	36	(0)	2571432
251	33.7	12.1	1.9	chr3	49461977	49462395	(148833164)	+	L2c	LINE/L2	2923	3385	(2)	2571433
16862	15.3	3.0	1.9	chr3	60880765	60884651	(137410908)	+	L1MA4	LINE/L1	3392	7317	(402)	2589667
1435	19.8	9.3	2.1	chr3	60884652	60884939	(137410620)	+	AluJb	SINE/Alu	1	311	(1)	2589671
18	4.7	0.0	0.0	chr3	69541418	69541439	(128754120)	+	(GA)n	Simple_repeat	1	22	(0)	2604352
301	37.1	8.9	0.0	chr3	99783026	99783219	(98512340)	+	Plat_L3	LINE/CR1	3258	3470	(116)	2640700
256	35.0	9.9	6.3	chr3	105616730	105617156	(92678403)	C	L2c	LINE/L2	(9)	3378	2935	2648485
2082	10.8	1.0	6.8	chr3	113225105	113225295	(85070264)	+	AluSz6	SINE/Alu	135	306	(6)	2658918
1134	21.0	1.2	2.7	chr3	120048399	120048657	(78246902)	+	MIR	SINE/MIR	3	257	(5)	2668537
1455	25.4	10.7	1.6	chr3	132047044	132047527	(66248032)	+	MLT1H	LTR/ERVL-MaLR	17	549	(0)	2687866
235	23.6	6.1	4.1	chr3	139430634	139430730	(58864829)	C	MIRc	SINE/MIR	(168)	100	2	2699295
16	21.0	3.9	1.9	chr3	170721847	170721897	(27573662)	+	GA-rich	Low_complexity	1	53	(0)	2743492
2183	11.3	0.0	2.3	chr3	172161977	172162278	(26133281)	C	AluSx	SINE/Alu	(17)	295	1	2745696
699	25.6	8.8	0.4	chr3	179160338	179160565	(19134994)	+	MamRep137	DNA/TcMar-Tigger	161	409	(101)	2755706
17480	8.4	3.9	2.4	chr3	180898242	180899831	(17395728)	+	MER61-int	LTR/ERV1	3573	5200	(17)	2758498
705	31.0	10.4	4.8	chr3	183448780	183449297	(14846262)	+	L1M5	LINE/L1	4743	5292	(854)	2762690
572	30.7	1.0	6.4	chr3	194350403	194350621	(3944938)	+	MIRb	SINE/MIR	55	261	(7)	2780982
444	5.9	15.0	0.0	chr4	9705699	9705766	(180508789)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	2803462
285	23.6	3.3	5.3	chr4	9705767	9705815	(180508740)	+	MamRep137	DNA/TcMar-Tigger	272	322	(188)	2803461
2049	14.2	2.3	0.0	chr4	18616767	18617069	(171597486)	+	AluSq2	SINE/Alu	1	310	(3)	2818182
273	29.5	0.0	0.0	chr4	71201571	71201648	(119012907)	+	MIR	SINE/MIR	184	261	(1)	2891918
6100	23.9	3.3	3.1	chr4	109879892	109881543	(80333012)	+	L1M3b	LINE/L1	744	2383	(4466)	2945656
548	25.6	11.5	5.0	chr4	139594944	139595124	(50619431)	+	MIR	SINE/MIR	3	207	(55)	2984929
2343	27.8	15.2	1.6	chr4	145207150	145208271	(45006284)	C	ERVL-E-int	LTR/ERVL	(384)	5330	4052	2992568
302	24.7	8.1	10.1	chr4	147877416	147877604	(42336951)	+	Charlie18a	DNA/hAT-Charlie	87	271	(71)	2996397
3016	18.7	5.8	2.1	chr4	174268083	174268420	(15946135)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	297	3032724
75	31.9	0.9	7.0	chr4	185740589	185741043	(4473512)	+	(CAACT)n	Simple_repeat	1	459	(0)	3048690
2048	11.1	5.2	2.2	chr5	17123681	17124049	(164414210)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3076265
223	31.1	5.3	2.2	chr5	17124050	17124079	(164414180)	+	MIR3	SINE/MIR	67	97	(111)	3076264
410	27.0	9.8	3.3	chr5	17248922	17249197	(164289062)	C	ORSL-2a	DNA/hAT-Tip100	(46)	296	1	3076507
3790	21.8	3.1	4.2	chr5	21685657	21686513	(159851746)	+	MER21B	LTR/ERVL	1	847	(21)	3082359
3993	29.8	7.0	2.8	chr5	25706101	25707719	(155830540)	C	L1MB8	LINE/L1	(5166)	1701	11	3087653
516	26.8	5.4	5.4	chr5	35228877	35229042	(146309217)	+	Charlie4z	DNA/hAT-Charlie	2	167	(0)	3101105
2221	13.2	0.0	0.0	chr5	39704821	39705115	(141833144)	C	AluSx	SINE/Alu	(17)	295	1	3107964
1256	21.0	1.9	2.2	chr5	57494779	57495094	(124043165)	C	MLT1H	LTR/ERVL-MaLR	(228)	321	7	3126847
13	22.1	4.1	2.0	chr5	72209571	72209619	(109328640)	+	(TGTGC)n	Simple_repeat	1	51	(0)	3148633
418	26.8	14.0	1.6	chr5	74083206	74083398	(107454861)	C	MamRep605	LTR?	(221)	628	408	3151470
433	28.5	8.1	6.5	chr5	77133116	77133440	(104404819)	+	MLT1H2	LTR/ERVL-MaLR	101	533	(16)	3156245
779	20.0	5.2	11.9	chr5	107779697	107780110	(73758149)	C	Zaphod	DNA/hAT-Tip100	(62)	3969	3663	3196767
56	2.0	0.0	0.0	chr5	138609505	138609556	(42928703)	+	(AC)n	Simple_repeat	1	52	(0)	3239199
12	10.8	6.7	0.0	chr5	139698867	139698896	(41839363)	+	(ATTTGC)n	Simple_repeat	1	32	(0)	3241326
795	25.1	8.0	2.5	chr5	139833206	139833442	(41704817)	+	MIRb	SINE/MIR	12	262	(6)	3241601
466	32.7	2.9	2.0	chr5	145958558	145958760	(35579499)	C	MIR3	SINE/MIR	(0)	208	4	3251591
251	33.3	6.5	2.5	chr5	150178007	150178169	(31360090)	+	MER5B	DNA/hAT-Charlie	9	178	(0)	3259377
231	31.4	16.7	0.7	chr5	151436792	151436932	(30101327)	C	MIR3	SINE/MIR	(21)	187	20	3261869
258	28.7	1.1	0.0	chr5	154138733	154138819	(27399440)	C	MIR3	SINE/MIR	(106)	102	15	3266496
13	8.5	4.0	0.0	chr5	154850568	154850592	(26687667)	+	(GCT)n	Simple_repeat	1	26	(0)	3268186
555	22.3	4.5	3.3	chr5	159317888	159318040	(22220219)	+	MIRb	SINE/MIR	13	167	(101)	3275894
1438	29.2	5.7	9.4	chr5	180303739	180304437	(1233822)	+	MER21C	LTR/ERVL	127	797	(141)	3312387
796	13.4	19.9	14.8	chr5	181216926	181217208	(321051)	C	AluJr	SINE/Alu	(11)	301	1	3313879
1648	14.8	0.4	0.4	chr6	7367346	7367574	(163438405)	C	AluJb	SINE/Alu	(83)	229	1	3325019
1002	12.6	7.3	2.2	chr6	11009234	11009499	(159796480)	C	MER44A	DNA/TcMar-Tigger	(186)	153	1	3330570
625	34.1	7.0	2.8	chr6	11009525	11009959	(159796020)	C	L2a	LINE/L2	(236)	3139	2695	3330569
2534	15.3	4.0	0.0	chr6	33942514	33942924	(136863055)	+	MSTB1	LTR/ERVL-MaLR	5	432	(0)	3367341
298	29.5	10.4	1.1	chr6	36701570	36701744	(134104235)	+	L2c	LINE/L2	3114	3306	(81)	3373119
1788	18.9	0.0	3.9	chr6	38425624	38425921	(132380058)	+	AluJb	SINE/Alu	1	287	(25)	3376369
38	2.8	0.0	0.0	chr6	38425922	38425958	(132380021)	+	(AC)n	Simple_repeat	1	37	(0)	3376370
489	28.3	0.9	0.0	chr6	42342214	42342326	(128463653)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	3383053
266	34.9	2.9	0.0	chr6	44068723	44068854	(126737125)	C	X7A_LINE	LINE/CR1	(36)	231	96	3386506
1282	23.1	7.1	3.4	chr6	44243350	44243522	(126562457)	C	MER58B	DNA/hAT-Charlie	(165)	176	1	3386846
195	31.6	3.8	3.6	chr6	52243516	52243608	(118562371)	+	MIRb	SINE/MIR	85	184	(24)	3398202
472	24.1	11.4	6.6	chr6	53906074	53906261	(116899718)	C	MIR	SINE/MIR	(34)	228	32	3400909
696	29.7	10.5	5.3	chr6	75065482	75065968	(95740011)	C	LTR33	LTR/ERVL	(0)	515	1	3425750
351	24.6	16.6	4.0	chr6	87579404	87579555	(83226424)	+	MER5B	DNA/hAT-Charlie	2	176	(2)	3441804
44	2.4	0.0	0.0	chr6	90231973	90232014	(80573965)	+	(GA)n	Simple_repeat	1	42	(0)	3446075
8970	18.3	9.9	6.3	chr6	106965887	106967247	(63838732)	+	ERVL-B4-int	LTR/ERVL	3229	4690	(1024)	3467849
1978	14.1	1.0	0.3	chr6	107020436	107020734	(63785245)	+	AluJo	SINE/Alu	1	301	(11)	3467995
280	32.7	5.7	3.5	chr6	108027230	108027400	(62778579)	+	MIR3	SINE/MIR	20	194	(14)	3469817
463	20.4	0.0	1.1	chr6	122079549	122079637	(48726342)	C	MER21C	LTR/ERVL	(589)	349	262	3489962
475	31.5	7.8	0.0	chr6	122079654	122079831	(48726148)	C	MIRb	SINE/MIR	(42)	226	34	3489963
14	18.5	0.0	0.0	chr6	122996244	122996274	(47809705)	+	(CAG)n	Simple_repeat	1	31	(0)	3491135
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
854	25.5	10.7	5.8	chr6	157193392	157193898	(13612081)	C	MLT1H2	LTR/ERVL-MaLR	(12)	567	1	3540534
613	19.6	13.7	0.0	chr6	158028408	158028565	(12777414)	C	MER5A	DNA/hAT-Charlie	(0)	189	7	3541846
1875	20.7	5.3	6.1	chr6	165781491	165781999	(5023980)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3552379
211	29.6	0.0	0.0	chr7	5418586	5418639	(153927334)	+	MIRc	SINE/MIR	72	125	(143)	3566990
709	24.1	14.7	10.0	chr7	5792867	5793159	(153552814)	+	MER21C	LTR/ERVL	162	476	(462)	3567822
253	24.1	0.5	3.1	chr7	8277649	8277747	(151068226)	C	MER5A	DNA/hAT-Charlie	(62)	127	25	3572306
24069	9.0	5.3	1.8	chr7	11193736	11197496	(148148477)	+	MER61-int	LTR/ERV1	1322	5217	(0)	3575911
975	27.4	11.1	8.0	chr7	22361862	22362298	(136983675)	+	MLT1G3	LTR/ERVL-MaLR	138	595	(0)	3590535
210	37.9	1.1	0.0	chr7	23267013	23267099	(136078874)	+	MER91A	DNA/hAT-Tip100	4	91	(105)	3592012
468	29.7	12.5	4.4	chr7	30879475	30879758	(128466215)	+	L2b	LINE/L2	2875	3214	(161)	3603814
1948	15.8	2.9	0.0	chr7	70676159	70676461	(88669512)	+	AluJb	SINE/Alu	1	312	(0)	3658672
16	13.8	0.0	8.5	chr7	70676462	70676478	(88669495)	+	GA-rich	Low_complexity	29	43	(0)	3658673
334	30.2	1.5	1.7	chr7	73588202	73588320	(85757653)	+	MIR	SINE/MIR	64	190	(18)	3664984
642	35.0	5.6	5.2	chr7	75872203	75872666	(83473307)	C	L3	LINE/CR1	(211)	3888	3423	3670785
2275	10.1	0.3	0.3	chr7	75872669	75872964	(83473009)	+	AluSz	SINE/Alu	1	296	(16)	3670786
229	28.1	1.5	1.5	chr7	80147874	80147938	(79198035)	C	L2a	LINE/L2	(4)	3422	3358	3677743
1035	29.4	7.0	11.6	chr7	81484132	81484758	(77861215)	+	L1M3b	LINE/L1	655	1250	(5031)	3679585
4691	26.2	11.1	9.1	chr7	94888010	94889290	(64456683)	C	MER34-int	LTR/ERV1	(6903)	1304	1	3697192
2486	19.3	8.6	0.9	chr7	94889296	94889819	(64456154)	C	MER34A	LTR/ERV1	(3)	568	1	3697192
1696	25.4	7.0	6.7	chr7	98551960	98552629	(60793344)	+	MER21C	LTR/ERVL	171	842	(96)	3702865
2309	7.2	3.6	0.7	chr7	99541076	99541368	(59804605)	C	AluY	SINE/Alu	(9)	302	1	3704981
224	27.9	14.1	1.2	chr7	107468042	107468121	(51877852)	C	MIRc	SINE/MIR	(145)	123	32	3719139
193	30.7	6.4	1.8	chr7	107468146	107468272	(51877701)	+	MIRb	SINE/MIR	19	155	(113)	3719140
574	16.1	27.1	0.7	chr7	112122919	112123207	(47222766)	C	LTR29	LTR/ERV1	(0)	644	228	3725318
1734	19.8	1.6	2.6	chr7	115124534	115124911	(44221062)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3729292
2316	11.7	0.0	0.0	chr7	117854785	117855084	(41490889)	C	AluSz	SINE/Alu	(12)	300	1	3733100
371	38.9	6.7	0.8	chr7	121009171	121009321	(38336652)	C	L2	LINE/L2	(2191)	1228	1067	3737102
1933	17.0	0.0	1.0	chr7	121009322	121009627	(38336346)	+	AluJb	SINE/Alu	1	303	(9)	3737103
49	4.0	0.0	0.0	chr7	125547030	125547080	(33798893)	+	(CT)n	Simple_repeat	1	51	(0)	3743272
1177	23.1	8.1	6.0	chr7	125547081	125547284	(33798689)	+	MLT1A	LTR/ERVL-MaLR	173	372	(2)	3743271
27	0.0	0.0	0.0	chr7	128739101	128739126	(30606847)	+	(GGGGCT)n	Simple_repeat	1	26	(0)	3747901
2239	10.0	0.0	0.6	chr7	132165917	132166227	(27179746)	+	AluSc	SINE/Alu	1	309	(0)	3754008
24	24.5	2.5	2.4	chr7	155458648	155458728	(3887245)	+	(GGC)n	Simple_repeat	1	83	(0)	3789661
474	31.9	14.0	1.4	chr7	159211470	159211761	(134212)	+	MLT1K	LTR/ERVL-MaLR	17	351	(244)	3794204
1632	26.6	6.3	3.5	chr8	10456484	10457035	(134681601)	C	L1M4a2	LINE/L1	(1635)	1021	371	3808081
311	36.7	5.7	1.9	chr8	28827764	28828082	(116310554)	+	MamRep605	LTR?	434	765	(84)	3836921
713	31.1	1.4	1.9	chr8	37785843	37786058	(107352578)	+	MIR	SINE/MIR	29	243	(19)	3850963
378	27.9	1.8	0.9	chr8	75469230	75469341	(69669295)	C	MLT1H	LTR/ERVL-MaLR	(386)	163	51	3901027
2169	11.7	2.6	0.3	chr8	143914230	143914528	(1224108)	+	AluSz	SINE/Alu	1	306	(6)	4006845
818	30.6	5.5	6.5	chr9	16928011	16928472	(121466245)	C	LTR33	LTR/ERVL	(0)	515	59	4032621
1950	26.9	1.9	1.5	chr9	17481690	17482225	(120912492)	+	L1M3b	LINE/L1	858	1395	(4886)	4033388
13	24.8	0.0	0.0	chr9	21995348	21995385	(116399332)	+	(TCCCC)n	Simple_repeat	1	38	(0)	4039971
2531	29.2	7.3	8.4	chr9	34197850	34199057	(104195660)	C	L1M3b	LINE/L1	(5070)	1211	11	4056971
804	27.3	1.3	0.4	chr9	86641982	86642209	(51752508)	+	LTR33A	LTR/ERVL	279	508	(12)	4108230
316	35.4	9.7	5.5	chr9	90810860	90811314	(47583403)	+	L1M5	LINE/L1	4829	5304	(842)	4114325
389	23.3	9.8	1.5	chr9	107504977	107505107	(30889610)	C	UCON78	DNA	(175)	268	126	4140872
545	6.5	1.3	0.0	chr9	121691460	121691536	(16703181)	+	Alu	SINE/Alu	221	298	(13)	4167560
1341	24.8	8.9	10.5	chr9	124144786	124145343	(14249374)	+	MER77B	LTR/ERVL	27	576	(124)	4172034
417	30.8	2.6	15.3	chr9	124821312	124821446	(13573271)	+	MIRb	SINE/MIR	22	129	(139)	4173307
1710	26.3	8.8	6.2	chr9	125739140	125739789	(12654928)	C	MER21C	LTR/ERVL	(161)	777	15	4175260
1813	31.8	4.5	2.2	chr9	127273338	127274094	(11120623)	+	L4_A_Mam	LINE/RTE-X	4216	4990	(0)	4177902
273	31.2	19.5	0.4	chr9	127971681	127971960	(10422757)	C	L2b	LINE/L2	(54)	3333	2977	4179430
974	25.1	1.3	0.0	chr9	135044461	135044683	(3350034)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	279	4192702
889	24.2	4.2	0.4	chrX	21943828	21944059	(134096836)	C	Charlie13b	DNA/hAT-Charlie	(22)	490	250	4395209
5273	25.8	6.0	6.4	chrX	37958565	37959212	(118081683)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	1105	4418221
2547	8.4	0.0	0.0	chrX	40471366	40471675	(115569220)	C	AluSq2	SINE/Alu	(3)	310	1	4422523
2037	22.6	7.1	7.4	chrX	44474265	44474938	(111565957)	+	MER77B	LTR/ERVL	27	698	(2)	4428948
20402	16.5	1.6	0.3	chrX	49144807	49148192	(106892703)	C	HERVE-int	LTR/ERV1	(4073)	3740	312	4437605
18	0.0	0.0	0.0	chrX	50204816	50204835	(105836060)	+	(CT)n	Simple_repeat	1	20	(0)	4439057
13	21.3	0.0	0.0	chrX	50204850	50204882	(105836013)	+	(TTTTG)n	Simple_repeat	1	33	(0)	4439058
12	16.5	0.0	0.0	chrX	110004427	110004453	(46036442)	+	(CCAGC)n	Simple_repeat	1	27	(0)	4507752
403	23.4	22.6	1.3	chrX	130167191	130167346	(25873549)	+	MIR	SINE/MIR	17	215	(47)	4536082
7719	22.8	2.4	3.5	chrX	155591651	155594855	(446040)	+	L1MA8	LINE/L1	1224	3395	(4170)	4573510