463	1.3	0.6	1.7	chr1	10001	10468	(248945954)	+	(TAACCC)n	Simple_repeat	1	471	(0)	1
528	6.5	1.3	4.5	chr1	180089	180998	(248775424)	+	(ACCCTA)n	Simple_repeat	1	922	(0)	268
3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
12	15.8	0.0	3.3	chr1	910061	910090	(248046332)	+	(CGCGC)n	Simple_repeat	1	30	(0)	1165
14	20.2	0.0	0.0	chr1	910107	910140	(248046282)	+	G-rich	Low_complexity	1	34	(0)	1166
587	16.8	0.0	5.3	chr1	995381	995512	(247960910)	+	L1MEc	LINE/L1	4908	5032	(1287)	1249
2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
1063	10.4	0.0	0.0	chr1	1016361	1016495	(247939927)	C	AluSz	SINE/Alu	(176)	136	2	1283
1904	11.5	0.0	0.4	chr1	1016552	1016677	(247939745)	C	AluSz	SINE/Alu	(53)	259	134	1284
6359	25.8	8.3	5.8	chr1	1098369	1098619	(247857803)	C	L1ME2	LINE/L1	(3216)	3105	2846	1341
1922	14.7	2.7	0.0	chr1	1098620	1098911	(247857511)	C	AluSq	SINE/Alu	(13)	300	1	1349
6359	25.8	8.3	5.8	chr1	1098912	1099077	(247857345)	C	L1ME2	LINE/L1	(3476)	2845	2677	1341
793	22.3	10.2	2.8	chr1	1173027	1173396	(247783026)	C	LTR46	LTR/ERV1	(20)	440	1	1434
17	21.6	0.0	7.3	chr1	1631607	1631674	(247324748)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	2073
480	30.1	6.5	0.0	chr1	1983142	1983370	(246973052)	+	L1MC4	LINE/L1	7099	7343	(699)	2696
1651	17.6	3.3	0.7	chr1	3860234	3860528	(245095894)	C	AluJb	SINE/Alu	(9)	303	1	4465
2036	23.3	6.5	3.5	chr1	3860529	3860872	(245095550)	C	L1MD2	LINE/L1	(11)	6348	5926	4466
2254	9.6	0.3	0.0	chr1	3860873	3861173	(245095249)	+	AluSx1	SINE/Alu	1	302	(10)	4467
2420	4.8	1.7	0.3	chr1	6236785	6237076	(242719346)	C	AluY	SINE/Alu	(15)	296	1	7888
748	15.6	1.5	7.1	chr1	6237227	6237367	(242719055)	C	FLAM_C	SINE/Alu	(10)	133	1	7889
261	20.2	5.7	10.0	chr1	6237368	6237455	(242718967)	+	L1ME4a	LINE/L1	6010	6095	(29)	7890
355	26.3	4.8	0.0	chr1	9408919	9409017	(239547405)	C	MER63C	DNA/hAT-Blackjack	(229)	701	598	13524
1870	15.3	0.0	0.9	chr1	9409024	9409340	(239547082)	+	MER2	DNA/TcMar-Tigger	6	319	(26)	13525
239	25.5	2.9	14.3	chr1	9409346	9409416	(239547006)	C	MIRb	SINE/MIR	(126)	142	74	13526
1755	11.6	0.8	0.0	chr1	9409417	9409658	(239546764)	+	AluSx	SINE/Alu	63	306	(6)	13527
239	25.5	2.9	14.3	chr1	9409659	9409705	(239546717)	C	MIRb	SINE/MIR	(195)	73	38	13526
12	13.6	0.0	7.9	chr1	9910656	9910693	(239045729)	+	(GGCGGA)n	Simple_repeat	1	38	(0)	14608
15	22.2	5.1	1.6	chr1	9997137	9997195	(238959227)	+	(CCCGC)n	Simple_repeat	1	62	(0)	14831
12	8.9	4.2	0.0	chr1	9997336	9997359	(238959063)	+	(GGC)n	Simple_repeat	1	25	(0)	14832
13	6.8	9.7	0.0	chr1	9997360	9997365	(238959057)	+	(AGGCGG)n	Simple_repeat	2	34	(0)	14833
1753	8.9	0.8	1.7	chr1	9998054	9998290	(238958132)	C	AluSx	SINE/Alu	(77)	235	1	14834
1987	14.9	1.0	0.3	chr1	10421814	10422108	(238534314)	+	AluJo	SINE/Alu	1	297	(15)	15760
1738	15.2	0.7	2.7	chr1	10422170	10422465	(238533957)	C	AluJb	SINE/Alu	(22)	290	1	15761
218	29.6	2.4	12.9	chr1	12620156	12620248	(236336174)	C	MIR3	SINE/MIR	(27)	181	99	20098
367	31.0	2.5	1.9	chr1	16535844	16536004	(232420418)	+	L2	LINE/L2	2456	2617	(802)	27722
353	21.6	6.1	12.6	chr1	16536089	16536263	(232420159)	C	MER20	DNA/hAT-Charlie	(56)	163	1	27723
1152	18.5	2.5	3.2	chr1	16537148	16537393	(232419029)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	122	27724
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
292	27.5	17.7	2.6	chr1	20090085	20090237	(228866185)	C	MIRb	SINE/MIR	(52)	216	36	35056
1692	15.3	1.0	6.7	chr1	24908365	24908677	(224047745)	+	AluJo	SINE/Alu	1	295	(17)	45974
687	19.9	0.8	0.0	chr1	26901844	26901974	(222054448)	+	FLAM_C	SINE/Alu	1	132	(11)	50411
2420	19.8	6.6	2.0	chr1	26902004	26902564	(222053858)	+	MER92B	LTR/ERV1	1	589	(47)	50412
13	18.9	0.0	0.0	chr1	27550803	27550832	(221405590)	+	(GGT)n	Simple_repeat	1	30	(0)	52014
2270	11.2	0.3	0.3	chr1	29177278	29177581	(219778841)	C	AluSp	SINE/Alu	(9)	304	1	56083
2375	11.4	0.0	0.0	chr1	29177894	29178199	(219778223)	C	AluSx1	SINE/Alu	(6)	306	1	56084
2209	10.1	1.9	1.9	chr1	29190512	29190818	(219765604)	+	AluSx1	SINE/Alu	1	307	(5)	56119
887	22.1	11.9	9.3	chr1	29190819	29190977	(219765445)	C	MLT1J	LTR/ERVL-MaLR	(317)	195	36	56116
302	27.6	7.9	0.9	chr1	29191003	29191108	(219765314)	+	L2c	LINE/L2	3027	3140	(247)	56105
1242	11.1	0.0	0.0	chr1	29191311	29191472	(219764950)	C	AluSc8	SINE/Alu	(19)	292	131	56120
1822	24.1	12.6	1.7	chr1	29793094	29793740	(219162682)	+	LTR41B	LTR/ERVL	17	744	(14)	57302
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
1735	9.6	14.3	0.0	chr1	31903178	31903428	(217052994)	C	AluSx	SINE/Alu	(19)	293	1	61597
1416	15.1	3.1	12.9	chr1	31903429	31903588	(217052834)	+	AluJr4	SINE/Alu	134	290	(22)	61595
1236	24.1	16.4	6.0	chr1	31903589	31903621	(217052801)	C	L2a	LINE/L2	(1377)	2042	2005	61592
30	0.0	0.0	0.0	chr1	31903622	31903649	(217052773)	+	(T)n	Simple_repeat	1	28	(0)	61598
1753	14.0	4.0	0.4	chr1	31903654	31903918	(217052504)	C	AluSz6	SINE/Alu	(37)	275	1	61599
19	19.2	3.0	10.9	chr1	33307212	33307344	(215649078)	+	(GCGCCAC)n	Simple_repeat	1	137	(0)	64891
139	22.7	0.9	8.5	chr1	33307505	33308064	(215648358)	+	(CCTCA)n	Simple_repeat	1	565	(0)	64892
43	28.4	1.0	7.2	chr1	33386695	33386899	(215569523)	+	(CA)n	Simple_repeat	1	207	(0)	65007
226	26.7	4.6	8.2	chr1	36081359	36081517	(212874905)	+	Charlie14a	DNA/hAT-Charlie	991	1143	(23)	70094
3656	16.0	4.2	0.6	chr1	36465010	36465694	(212490728)	+	MER67C	LTR/ERV1	1	711	(0)	70936
65	10.6	0.0	2.8	chr1	36465872	36465980	(212490442)	+	(GAAG)n	Simple_repeat	1	109	(0)	70937
26	13.3	0.0	0.0	chr1	38044583	38044623	(210911799)	+	(T)n	Simple_repeat	1	41	(0)	73966
2008	13.6	1.3	1.0	chr1	42238030	42238331	(206718091)	C	AluSz	SINE/Alu	(9)	303	1	82164
2937	24.9	10.1	8.1	chr1	42238332	42238566	(206717856)	C	L1ME1	LINE/L1	(1375)	4771	4604	82160
1694	16.7	7.1	0.4	chr1	42238567	42238842	(206717580)	C	AluJb	SINE/Alu	(16)	296	1	82165
731	16.3	0.0	2.8	chr1	44730545	44730685	(204225737)	+	AluJr	SINE/Alu	175	311	(1)	86587
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
12	19.3	0.0	5.1	chr1	44784486	44784524	(204171898)	+	(GCGG)n	Simple_repeat	1	39	(0)	86706
723	30.0	9.9	2.1	chr1	44817427	44817760	(204138662)	C	L2a	LINE/L2	(0)	3426	3064	86764
214	21.5	3.0	3.0	chr1	44817745	44817811	(204138611)	C	L2a	LINE/L2	(558)	2861	2795	86764
1742	16.2	0.4	0.0	chr1	44817814	44818072	(204138350)	+	AluSz	SINE/Alu	1	260	(52)	86765
320	15.4	6.0	3.1	chr1	44818073	44818137	(204138285)	+	AluJo	SINE/Alu	235	301	(11)	86766
594	21.2	6.6	6.6	chr1	44818138	44818334	(204138088)	C	L2a	LINE/L2	(624)	2795	2599	86764
13	3.7	10.7	0.0	chr1	45347117	45347144	(203609278)	+	(CTGCCC)n	Simple_repeat	1	31	(0)	87772
2136	11.3	3.6	0.0	chr1	45347285	45347575	(203608847)	+	AluSz	SINE/Alu	2	303	(9)	87773
1639	19.0	0.7	2.0	chr1	45483715	45484014	(203472408)	+	AluJo	SINE/Alu	1	296	(16)	88135
354	18.5	2.4	12.0	chr1	45484015	45484081	(203472341)	+	Tigger2	DNA/TcMar-Tigger	2655	2718	(0)	88134
2420	9.3	0.0	0.3	chr1	45484099	45484408	(203472014)	C	AluSx1	SINE/Alu	(3)	309	1	88136
2125	10.8	1.4	0.3	chr1	45484454	45484748	(203471674)	+	AluSz	SINE/Alu	1	298	(14)	88137
1853	15.4	4.3	0.0	chr1	51002310	51002595	(197953827)	C	AluSz	SINE/Alu	(13)	299	1	97769
573	25.2	12.4	2.0	chr1	51002652	51002853	(197953569)	+	LTR16E1	LTR/ERVL	1	226	(312)	97770
44476	8.4	0.9	0.6	chr1	52220076	52225369	(196731053)	C	HERVIP10B3-int	LTR/ERV1	(2333)	5270	1	100420
2439	8.9	0.3	0.3	chr1	52327322	52327614	(196628808)	+	AluSx4	SINE/Alu	1	293	(17)	100629
2331	11.8	0.3	1.3	chr1	52327692	52328005	(196628417)	+	AluSx1	SINE/Alu	1	311	(1)	100630
11905	12.1	6.8	0.4	chr1	55113128	55115236	(193841186)	+	L1PA7	LINE/L1	3231	5488	(666)	106501
2519	2.5	7.2	0.0	chr1	55115237	55115521	(193840901)	+	AluYa5	SINE/Alu	1	307	(4)	106502
13	8.3	3.6	3.5	chr1	55561362	55561389	(193395033)	+	(TAA)n	Simple_repeat	1	29	(0)	107343
1147	22.1	8.6	6.1	chr1	55561436	55561830	(193394592)	+	MLT1C	LTR/ERVL-MaLR	10	415	(52)	107344
7078	14.9	5.8	5.4	chr1	55793728	55795000	(193161422)	+	MER52C	LTR/ERV1	1	1278	(0)	107711
2232	11.6	0.0	0.0	chr1	65024695	65024987	(183931435)	+	AluSq2	SINE/Alu	1	293	(20)	124925
824	29.5	7.6	8.5	chr1	65024988	65025410	(183931012)	C	MLT1K	LTR/ERVL-MaLR	(148)	447	1	124924
1495	20.2	9.4	1.6	chr1	68050914	68051458	(180904964)	+	L1MD	LINE/L1	4833	5426	(933)	130031
14	0.0	0.0	0.0	chr1	75797175	75797192	(173159230)	+	(AGC)n	Simple_repeat	1	18	(0)	140467
1871	13.5	1.3	4.5	chr1	75797652	75797962	(173158460)	+	AluJb	SINE/Alu	1	301	(11)	140468
633	33.5	4.3	0.0	chr1	77671505	77671725	(171284697)	+	MIR	SINE/MIR	30	260	(2)	143279
510	18.2	0.0	2.9	chr1	77671814	77671915	(171284507)	C	MER44B	DNA/TcMar-Tigger	(0)	550	452	143280
998	20.1	1.5	0.0	chr1	77671914	77672112	(171284310)	C	MER44B	DNA/TcMar-Tigger	(284)	266	65	143280
190	27.3	0.0	0.0	chr1	82494551	82494605	(166461817)	+	L2	LINE/L2	2148	2202	(1217)	149881
249	34.4	8.6	1.5	chr1	93368832	93368885	(155587537)	C	MIRb	SINE/MIR	(109)	159	105	166188
632	19.2	27.1	4.2	chr1	93368886	93369146	(155587276)	+	MER2	DNA/TcMar-Tigger	3	345	(0)	166189
249	34.4	8.6	1.5	chr1	93369147	93369221	(155587201)	C	MIRb	SINE/MIR	(164)	104	20	166188
621	26.7	10.0	2.7	chr1	93369279	93369536	(155586886)	+	Tigger10	DNA/TcMar-Tigger	933	1211	(633)	166190
4543	12.5	1.3	0.5	chr1	100044801	100045524	(148910898)	C	L1PB2	LINE/L1	(1288)	4858	4125	175854
692	18.0	2.4	9.0	chr1	100045528	100045704	(148910718)	C	L1MA3	LINE/L1	(0)	6305	6141	175856
381	4.3	0.0	0.0	chr1	100045711	100045757	(148910665)	C	AluSz6	SINE/Alu	(12)	300	254	175857
327	16.1	0.0	0.0	chr1	100045777	100045832	(148910590)	+	AluYe5	SINE/Alu	245	300	(10)	175858
6860	15.0	4.6	2.9	chr1	100045834	100046212	(148910210)	C	L1M2	LINE/L1	(1056)	5087	4711	175859
469	27.1	4.7	9.6	chr1	108955144	108955335	(140001087)	C	L2a	LINE/L2	(53)	3373	3192	187626
496	31.3	4.2	1.6	chr1	108955356	108955540	(140000882)	+	MLT1G3	LTR/ERVL-MaLR	7	196	(359)	187629
2759	18.5	3.9	1.9	chr1	108955541	108956075	(140000347)	+	MLT2B3	LTR/ERVL	1	546	(8)	187630
877	12.5	0.0	0.8	chr1	109989387	109989514	(138966908)	C	AluJo	SINE/Alu	(181)	131	5	189397
2295	10.2	0.0	1.4	chr1	112642203	112642514	(136313908)	C	AluSg4	SINE/Alu	(0)	310	1	193495
202	20.8	2.0	2.0	chr1	112642607	112642655	(136313767)	+	L2c	LINE/L2	3281	3329	(58)	193494
1851	15.8	4.4	0.6	chr1	113808143	113808473	(135147949)	C	MER2	DNA/TcMar-Tigger	(1)	344	1	195558
3151	19.4	11.2	4.3	chr1	113808474	113809059	(135147363)	+	L1MD2	LINE/L1	5611	6227	(15)	195553
1099	18.9	1.6	3.2	chr1	116435988	116436238	(132520184)	+	L1MB8	LINE/L1	5925	6171	(7)	199690
2515	24.8	2.1	7.8	chr1	116436239	116436514	(132519908)	C	L1MD1	LINE/L1	(1297)	4849	4590	199689
1224	20.8	10.2	1.3	chr1	116436515	116436826	(132519596)	+	MER2	DNA/TcMar-Tigger	3	345	(0)	199691
6711	6.7	0.9	0.0	chr1	119180393	119181234	(129775188)	C	HERV17-int	LTR/ERV1	(5038)	3588	2739	203709
10358	9.9	2.2	4.1	chr1	119181237	119182807	(129773615)	C	HERV17-int	LTR/ERV1	(7086)	1540	1	203709
19	26.9	0.0	2.9	chr1	120176851	120176920	(128779502)	+	(TATTTTA)n	Simple_repeat	1	70	(0)	205122
674	11.8	0.0	0.0	chr1	143717964	143718056	(105238366)	C	AluJb	SINE/Alu	(15)	297	205	208216
13	0.0	9.1	0.0	chr1	143718395	143718416	(105238006)	+	(TTG)n	Simple_repeat	1	24	(0)	208217
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1887	16.9	0.3	5.0	chr1	145819155	145819474	(103136948)	+	AluJb	SINE/Alu	1	305	(7)	211593
6942	11.9	1.8	2.4	chr1	145819475	145819756	(103136666)	+	L1P4	LINE/L1	3504	3788	(2358)	211592
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
11302	15.5	2.8	1.3	chr1	147316057	147318463	(101637959)	+	L1PA8A	LINE/L1	1	2462	(4021)	213938
2431	5.8	0.3	0.7	chr1	148280111	148280405	(100676017)	+	AluSc5	SINE/Alu	6	299	(10)	215421
1404	20.9	9.8	3.0	chr1	148295012	148295712	(100660710)	C	SATR1	Satellite	(1)	748	1	215446
12	9.2	0.0	4.0	chr1	148296572	148296596	(100659826)	+	(CCT)n	Simple_repeat	1	25	(0)	215447
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
2353	6.0	0.0	0.0	chr1	150975580	150975879	(97980543)	+	AluSx	SINE/Alu	1	300	(12)	220234
2585	5.2	0.7	0.3	chr1	151197269	151197578	(97758844)	C	AluY	SINE/Alu	(0)	311	1	220704
472	26.5	0.0	8.6	chr1	151197674	151197801	(97758621)	C	L2c	LINE/L2	(0)	3387	3271	220705
877	24.5	7.3	0.9	chr1	154788755	154788972	(94167450)	C	MIR	SINE/MIR	(5)	257	25	226785
1572	19.3	11.9	2.8	chr1	154788981	154789412	(94167010)	C	MLT1D	LTR/ERVL-MaLR	(8)	497	21	226786
3540	15.4	3.6	5.3	chr1	155424025	155424411	(93532011)	C	Tigger2	DNA/TcMar-Tigger	(1965)	753	374	227976
2281	10.2	0.3	0.0	chr1	155424412	155424706	(93531716)	C	AluSp	SINE/Alu	(17)	296	1	227982
2358	9.3	4.3	0.0	chr1	155549356	155549644	(93406778)	+	AluSx	SINE/Alu	1	302	(10)	228266
758	18.5	5.1	0.0	chr1	155549645	155549774	(93406648)	+	MER2B	DNA/TcMar-Tigger	200	336	(0)	228267
901	25.6	18.2	3.3	chr1	155549776	155550027	(93406395)	+	L2a	LINE/L2	2448	2720	(699)	228263
2391	11.0	0.3	0.0	chr1	155550028	155550317	(93406105)	C	AluSg	SINE/Alu	(19)	291	1	228268
2333	20.3	8.5	5.0	chr1	155570302	155570878	(93385544)	+	MER44D	DNA/TcMar-Tigger	107	705	(0)	228326
693	15.8	6.0	1.6	chr1	155571044	155571170	(93385252)	+	AluJr4	SINE/Alu	1	133	(179)	228327
843	16.5	1.9	5.5	chr1	155571171	155571202	(93385220)	+	AluJr	SINE/Alu	134	159	(153)	228328
1325	14.0	3.5	5.1	chr1	155571203	155571436	(93384986)	+	MER30	DNA/hAT-Charlie	1	230	(0)	228329
11828	18.0	8.1	7.7	chr1	155655994	155658020	(93298402)	C	HERV4_I-int	LTR/ERV1	(3567)	2972	951	228488
11828	18.0	8.1	7.7	chr1	155659005	155659199	(93297223)	C	HERV4_I-int	LTR/ERV1	(5589)	268	60	228488
1139	16.1	9.2	0.4	chr1	155659363	155659627	(93296795)	C	MER51A	LTR/ERV1	(0)	640	168	228493
1415	16.4	11.8	3.2	chr1	155890493	155890801	(93065621)	+	MER44A	DNA/TcMar-Tigger	1	339	(0)	229040
2017	10.5	6.1	0.3	chr1	155890821	155891114	(93065308)	C	AluSq2	SINE/Alu	(1)	312	1	229041
2468	6.8	0.7	0.0	chr1	155891209	155891504	(93064918)	+	AluSg	SINE/Alu	2	299	(11)	229042
858	13.4	1.5	0.0	chr1	157170735	157170868	(91785554)	C	AluJr4	SINE/Alu	(176)	136	1	231371
416	34.9	7.8	0.5	chr1	157171006	157171218	(91785204)	C	MIRb	SINE/MIR	(17)	251	22	231372
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
465	30.4	12.8	1.1	chr1	161133306	161133568	(87822854)	C	L2	LINE/L2	(462)	2957	2660	236932
26	8.9	0.0	0.0	chr1	161307003	161307038	(87649384)	+	(A)n	Simple_repeat	1	36	(0)	237267
660	0.0	0.0	0.0	chr1	161531113	161531184	(87425238)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	237673
17	14.2	3.2	0.0	chr1	161605695	161605725	(87350697)	+	(AT)n	Simple_repeat	1	32	(0)	237801
392	20.0	3.7	0.0	chr1	161977993	161978097	(86978325)	+	L1MC5a	LINE/L1	2104	2212	(565)	238402
1587	18.3	7.4	4.8	chr1	161978098	161978122	(86978300)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	345	238403
4816	10.9	8.1	2.8	chr1	161978123	161978896	(86977526)	C	LTR1B1	LTR/ERV1	(0)	818	1	238404
370	22.2	0.0	1.2	chr1	175887938	175888019	(73068403)	C	MER5A	DNA/hAT-Charlie	(0)	189	109	259395
304	25.3	0.0	2.1	chr1	175888020	175888030	(73068392)	+	MER5B	DNA/hAT-Charlie	1	91	(87)	259396
1858	5.5	5.0	17.4	chr1	182838488	182838831	(66117591)	C	AluSx1	SINE/Alu	(13)	299	1	270131
310	30.6	0.0	1.2	chr1	182838895	182838980	(66117442)	C	MIRb	SINE/MIR	(19)	249	165	270132
2804	7.7	0.6	0.0	chr1	202037396	202037746	(46918676)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	297098
2233	7.0	2.0	4.0	chr1	202787606	202787907	(46168515)	+	AluSx3	SINE/Alu	1	296	(15)	298483
590	18.4	12.5	7.8	chr1	202787908	202788019	(46168403)	C	Charlie1a	DNA/hAT-Charlie	(368)	1087	1030	298482
1177	25.4	11.5	6.1	chr1	210653547	210653741	(38302681)	+	L1ME4b	LINE/L1	689	882	(10)	311473
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
464	33.5	9.6	3.2	chr1	225773380	225773854	(23182568)	C	L2	LINE/L2	(1016)	2403	1895	334558
741	23.0	19.1	0.3	chr1	225774125	225774395	(23182027)	C	MER46C	DNA/TcMar-Tigger	(0)	338	14	334559
15280	8.9	0.4	1.7	chr1	225796908	225798945	(23157477)	C	HERVK14-int	LTR/ERVK	(2733)	3363	1352	334598
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
293	21.4	5.6	3.5	chr1	225883213	225883299	(23073123)	+	MIR3	SINE/MIR	94	182	(26)	334735
2512	6.5	0.3	0.0	chr1	225883421	225883727	(23072695)	+	AluSp	SINE/Alu	1	308	(5)	334736
12	18.3	9.6	3.8	chr1	226223763	226223835	(22732587)	+	(GCGCCCT)n	Simple_repeat	1	80	(0)	335480
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
318	16.6	0.0	4.6	chr1	226959973	226960669	(21995753)	+	(GTG)n	Simple_repeat	1	697	(0)	336752
245	28.4	12.8	0.8	chr1	226960979	226961095	(21995327)	+	MIR1_Amn	SINE/MIR	6	138	(92)	336753
2330	10.7	0.0	0.3	chr1	227043132	227043430	(21912992)	+	AluSc	SINE/Alu	1	298	(11)	336843
2080	9.1	3.4	0.7	chr1	228100350	228100634	(20855788)	+	AluSq2	SINE/Alu	5	297	(16)	338288
246	14.8	12.9	0.0	chr1	228100703	228100783	(20855639)	+	MER113	DNA/hAT-Charlie	343	435	(86)	338289
29	18.6	1.4	2.7	chr1	228101387	228101458	(20854964)	+	(TCTTCT)n	Simple_repeat	1	73	(0)	338290
12	17.4	0.0	8.7	chr1	228417139	228417184	(20539238)	+	(GGTGG)n	Simple_repeat	1	46	(0)	338676
4222	14.2	0.8	0.0	chr1	228417414	228418041	(20538381)	C	MER41B	LTR/ERV1	(0)	634	2	338677
413	19.6	3.2	0.0	chr1	228451957	228452048	(20504374)	+	MLT1A0	LTR/ERVL-MaLR	257	351	(14)	338735
763	18.9	0.3	0.1	chr1	228553665	228554959	(20401463)	+	HSAT4	Satellite/centr	1	1298	(0)	338871
20	30.9	1.0	5.0	chr1	228555066	228555165	(20401257)	+	(TG)n	Simple_repeat	1	101	(0)	338872
826	7.2	8.3	0.0	chr1	228555793	228555903	(20400519)	+	5S	rRNA	1	121	(0)	338873
2308	8.2	0.0	2.5	chr1	228555908	228556226	(20400196)	C	AluY	SINE/Alu	(0)	311	1	338874
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
2327	9.1	0.0	0.0	chr1	228627830	228628136	(20328286)	+	AluY	SINE/Alu	1	307	(4)	338930
1109	0.8	0.0	0.0	chr1	228628146	228628266	(20328156)	C	5S	rRNA	(0)	121	1	338931
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1887	19.7	2.3	0.0	chr1	229198639	229198973	(19757449)	+	MER2	DNA/TcMar-Tigger	1	343	(2)	339834
301	28.6	6.3	2.7	chr1	229198974	229199041	(19757381)	+	MER112	DNA/hAT-Charlie	125	190	(71)	339833
12	18.1	0.0	3.0	chr1	231351514	231351546	(17604876)	+	A-rich	Low_complexity	1	33	(0)	343353
432	24.9	2.1	14.3	chr1	235641803	235642018	(13314404)	+	L2a	LINE/L2	3148	3336	(90)	350167
869	15.0	1.8	1.2	chr1	235651608	235651769	(13304653)	+	MER5A	DNA/hAT-Charlie	2	164	(25)	350174
2060	8.9	0.0	2.5	chr1	235651845	235652125	(13304297)	C	AluSc	SINE/Alu	(0)	309	36	350175
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1895	18.3	0.0	0.0	chr1	242014414	242014713	(6941709)	C	AluJb	SINE/Alu	(12)	300	1	360331
221	28.1	12.6	2.2	chr1	242014714	242014740	(6941682)	C	L2	LINE/L2	(1385)	2034	2004	360330
200	28.2	3.7	2.8	chr1	243979767	243979872	(4976550)	C	L2a	LINE/L2	(54)	3372	3266	363402
2422	9.3	0.0	3.1	chr1	244760999	244761320	(4195102)	C	AluSq	SINE/Alu	(1)	312	1	364708
383	15.4	0.0	5.8	chr1	244786027	244786095	(4170327)	C	MSTD	LTR/ERVL-MaLR	(0)	396	332	364761
983	11.4	1.3	0.0	chr1	244786096	244786244	(4170178)	+	AluJb	SINE/Alu	1	151	(161)	364762
214	12.9	0.0	0.0	chr1	244786247	244786277	(4170145)	+	MER5B	DNA/hAT-Charlie	10	40	(138)	364763
561	17.7	0.0	1.0	chr1	244786350	244786446	(4169976)	+	MER5B	DNA/hAT-Charlie	83	178	(0)	364764
229	21.9	0.0	0.0	chr1	244786453	244786493	(4169929)	C	MER5B	DNA/hAT-Charlie	(137)	41	1	364765
264	17.1	0.0	0.0	chr1	244786500	244786540	(4169882)	+	MER5B	DNA/hAT-Charlie	138	178	(0)	364766
2259	10.0	0.7	0.0	chr1	244829232	244829522	(4126900)	C	AluSx	SINE/Alu	(19)	293	1	364878
309	30.2	1.5	7.2	chr1	244829707	244829845	(4126577)	+	MLT1N2	LTR/ERVL-MaLR	432	562	(0)	364879
15	20.6	3.9	1.9	chr1	244829878	244829929	(4126493)	+	(TATTACA)n	Simple_repeat	1	54	(0)	364880
8798	3.3	24.6	0.0	chr1	248944224	248945548	(10874)	+	TAR1	Satellite/telo	314	2069	(42)	371028
676	4.0	0.7	3.4	chr1	248945549	248946422	(10000)	+	(AGGGTT)n	Simple_repeat	1	880	(0)	371029
562	23.6	8.1	0.0	chr10	794305	794452	(133002970)	+	L1M5	LINE/L1	4552	4712	(1434)	371851
6484	14.0	3.5	1.5	chr10	794454	795143	(133002279)	+	L1PA15-16	LINE/L1	1190	1890	(4963)	371852
639	19.9	2.7	6.4	chr10	5976441	5976596	(127820826)	+	Charlie4z	DNA/hAT-Charlie	18	167	(0)	378666
2216	12.0	0.0	0.0	chr10	6015081	6015379	(127782043)	C	AluSz	SINE/Alu	(0)	312	14	378751
490	28.3	11.4	5.3	chr10	6154546	6154785	(127642637)	C	L2a	LINE/L2	(599)	2820	2559	378988
2486	4.6	0.0	0.7	chr10	6155198	6155503	(127641919)	C	AluY	SINE/Alu	(7)	304	1	378993
11	30.9	0.0	0.0	chr10	8043684	8043727	(125753695)	+	(GGAGGCG)n	Simple_repeat	1	44	(0)	382050
3207	19.7	7.7	2.0	chr10	11836814	11837498	(121959924)	+	MER44C	DNA/TcMar-Tigger	5	731	(2)	387615
1315	23.8	12.4	6.2	chr10	14995226	14996674	(118800748)	C	SATR1	Satellite	(141)	1538	1	393417
1918	18.3	1.6	6.3	chr10	14996530	14999051	(118798371)	+	SATR2	Satellite	1	2402	(7)	393418
1811	19.9	6.4	5.6	chr10	17303495	17305466	(116491956)	+	SATR2	Satellite	1	1654	(0)	397143
2048	11.6	0.0	1.1	chr10	17305469	17305745	(116491677)	C	AluSx	SINE/Alu	(38)	274	1	397144
28	14.5	0.0	0.0	chr10	22687542	22687587	(111109835)	+	(CA)n	Simple_repeat	1	46	(0)	405631
1158	25.2	10.3	0.3	chr10	22687600	22687906	(111109516)	C	MER2	DNA/TcMar-Tigger	(3)	342	2	405632
684	27.5	0.6	0.6	chr10	22693974	22694152	(111103270)	+	MER8	DNA/TcMar-Tigger	61	239	(0)	405640
383	24.2	14.8	3.0	chr10	22694166	22694331	(111103091)	+	Charlie7	DNA/hAT-Charlie	13	201	(2411)	405641
2295	10.1	0.0	0.0	chr10	32360622	32360908	(101436514)	+	AluSx	SINE/Alu	11	297	(15)	421848
16	23.6	7.3	0.0	chr10	42242447	42242501	(91554921)	+	(CG)n	Simple_repeat	1	59	(0)	431872
2334	7.4	0.3	1.0	chr10	67725180	67725476	(66071946)	C	AluY	SINE/Alu	(16)	295	1	467781
15	18.3	0.0	3.0	chr10	67725656	67725688	(66071734)	+	GA-rich	Low_complexity	1	33	(0)	467782
1960	17.1	0.7	0.7	chr10	67798398	67798701	(65998721)	+	AluJb	SINE/Alu	1	304	(8)	467909
982	26.8	10.3	6.9	chr10	67798702	67798752	(65998670)	+	L1ME4a	LINE/L1	5987	6037	(87)	467907
33	5.2	0.0	0.0	chr10	70132752	70132791	(63664631)	+	(CGCTCC)n	Simple_repeat	1	40	(0)	472807
2519	18.8	4.7	3.3	chr10	86810280	86810897	(46986525)	C	L1MB7	LINE/L1	(394)	5790	5166	500205
592	14.6	0.0	0.0	chr10	86810918	86810999	(46986423)	C	AluSx	SINE/Alu	(183)	129	48	500207
2140	14.2	0.0	0.0	chr10	86811028	86811338	(46986084)	C	AluSz6	SINE/Alu	(1)	311	1	500208
2251	10.6	0.0	6.1	chr10	92777381	92777710	(41019712)	+	AluSz	SINE/Alu	1	310	(2)	509878
1971	15.6	1.4	1.2	chr10	92880085	92880428	(40916994)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	510072
12	14.6	0.0	5.9	chr10	96831207	96831240	(36966182)	+	A-rich	Low_complexity	1	34	(0)	516800
13	24.3	5.4	3.9	chr10	96831340	96831413	(36966009)	+	(TTCTCCT)n	Simple_repeat	1	78	(0)	516801
41	21.0	4.5	0.9	chr10	100829221	100829331	(32968091)	+	(CT)n	Simple_repeat	1	116	(0)	524015
2073	20.2	5.0	4.5	chr10	102455857	102456339	(31341083)	+	MLT1D	LTR/ERVL-MaLR	21	505	(0)	526962
355	33.9	1.8	2.4	chr10	102721989	102722157	(31075265)	+	L2	LINE/L2	2693	2860	(559)	527454
1360	17.1	14.4	2.8	chr10	102722195	102722518	(31074904)	C	L1MCb	LINE/L1	(4315)	2436	2069	527460
261	24.3	8.8	8.0	chr10	117006079	117006190	(16791232)	+	MIRb	SINE/MIR	84	196	(72)	549706
1541	22.9	8.9	1.9	chr10	118746266	118746882	(15050540)	+	L1ME1	LINE/L1	4959	5621	(2547)	552522
1703	12.6	7.6	0.7	chr10	118746895	118747189	(15050233)	+	MER1B	DNA/hAT-Charlie	1	317	(22)	552529
294	22.4	8.4	2.6	chr10	119541504	119541581	(14255841)	C	MIR	SINE/MIR	(170)	92	10	554094
278	30.6	4.3	0.9	chr10	119541677	119541788	(14255634)	+	MIRb	SINE/MIR	25	140	(128)	554095
2039	12.6	0.0	2.8	chr10	125078856	125079172	(8718250)	+	AluSz	SINE/Alu	1	308	(4)	562969
414	19.6	7.8	0.9	chr10	130189445	130189552	(3607870)	C	MER115	DNA/hAT-Tip100	(69)	624	509	569235
199	20.5	2.5	0.0	chr10	132394677	132394715	(1402707)	C	MamTip2	DNA/hAT-Tip100	(99)	206	167	571604
12	15.0	8.7	2.0	chr10	133236543	133236588	(560834)	+	(CGGCTCC)n	Simple_repeat	1	50	(0)	572299
180	14.3	0.0	2.8	chr10	133277012	133277047	(520375)	C	MIR	SINE/MIR	(115)	147	113	572330
242	35.3	2.2	0.0	chr10	133345251	133345383	(452039)	C	L1M4a2	LINE/L1	(2438)	218	83	572415
1873	16.2	7.7	3.3	chr10	133345508	133346114	(451308)	C	MER4B	LTR/ERV1	(0)	900	1	572418
200	9.8	7.3	3.8	chr10	133445725	133445777	(351645)	C	L2	LINE/L2	(801)	2618	2564	572529
16	18.9	0.0	0.0	chr10	133446159	133446194	(351228)	+	(GCCCT)n	Simple_repeat	1	36	(0)	572530
834	31.1	9.0	1.6	chr10	133446782	133447232	(350190)	C	L1MDa	LINE/L1	(1566)	4971	4484	572531
402	18.5	1.4	5.6	chr10	133566377	133567481	(229941)	+	G-rich	Low_complexity	1	1121	(0)	572642
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
8705	1.0	24.2	0.0	chr10	133785742	133787104	(10318)	+	TAR1	Satellite/telo	314	2111	(0)	572857
113	26.6	0.6	1.2	chr10	133787105	133787422	(10000)	+	G-rich	Low_complexity	1	320	(0)	572858
756	6.8	1.0	4.2	chr11	175280	176542	(134910080)	+	(ACCCTA)n	Simple_repeat	1	1276	(0)	573044
12	15.8	0.0	3.3	chr11	353642	353671	(134732951)	+	(TGTT)n	Simple_repeat	1	30	(0)	573315
5961	6.2	2.9	5.7	chr11	353859	354215	(134732407)	C	LTR13A	LTR/ERVK	(0)	966	609	573316
11	21.0	2.5	2.4	chr11	375408	375447	(134711175)	+	(CCCTGA)n	Simple_repeat	1	41	(0)	573340
15	18.2	2.1	4.2	chr11	376174	376220	(134710402)	+	(GGCGG)n	Simple_repeat	1	48	(0)	573341
13	25.2	0.0	2.3	chr11	376270	376313	(134710309)	+	(ATGAGG)n	Simple_repeat	1	44	(0)	573342
16	18.3	0.0	6.1	chr11	400482	400530	(134686092)	+	(GCCCCC)n	Simple_repeat	1	49	(0)	573354
17	26.0	1.8	0.0	chr11	417387	417441	(134669181)	+	(GCAGCG)n	Simple_repeat	1	56	(0)	573358
248	31.8	5.6	3.8	chr11	479942	480098	(134606524)	C	L1ME1	LINE/L1	(42)	6137	5978	573441
2219	7.9	2.4	0.7	chr11	520328	520618	(134566004)	C	AluSz	SINE/Alu	(16)	296	1	573500
12	25.2	5.2	1.6	chr11	555572	555629	(134530993)	+	G-rich	Low_complexity	1	61	(0)	573558
17	13.1	7.1	0.0	chr11	556147	556188	(134530434)	+	(GGCCG)n	Simple_repeat	1	45	(0)	573559
24	24.7	1.9	5.6	chr11	626992	627097	(134459525)	+	G-rich	Low_complexity	1	108	(0)	573646
12	16.4	0.0	7.5	chr11	637192	637231	(134449391)	+	G-rich	Low_complexity	1	40	(0)	573670
20	26.9	6.4	1.7	chr11	637322	637431	(134449191)	+	G-rich	Low_complexity	1	117	(0)	573671
1388	15.9	1.7	15.4	chr11	816632	816838	(134269784)	C	AluJr	SINE/Alu	(15)	297	127	573983
1796	14.9	2.7	2.0	chr11	927065	927360	(134159262)	C	AluJb	SINE/Alu	(10)	302	5	574112
16	0.0	0.0	0.0	chr11	927511	927527	(134159095)	+	(A)n	Simple_repeat	1	17	(0)	574113
2053	14.1	1.3	1.0	chr11	927535	927840	(134158782)	+	AluJb	SINE/Alu	2	308	(4)	574114
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
13	20.1	1.7	8.2	chr11	1018065	1018124	(134068498)	+	(GGT)n	Simple_repeat	1	61	(0)	574243
592	30.5	4.9	6.0	chr11	1305448	1305784	(133780838)	+	L1MC5a	LINE/L1	1778	2067	(710)	574449
331	25.8	5.7	1.5	chr11	1381406	1381539	(133705083)	+	L1ME4a	LINE/L1	5966	6105	(19)	574561
209	28.8	2.9	0.0	chr11	1381705	1381770	(133704852)	+	MIR3	SINE/MIR	88	155	(53)	574562
14	18.4	0.0	0.0	chr11	1943573	1943603	(133143019)	+	(GAAT)n	Simple_repeat	1	31	(0)	575281
2247	22.9	8.0	0.5	chr11	1943831	1944607	(133142015)	+	L1MC1	LINE/L1	5498	6333	(11)	575282
2385	9.9	0.0	0.0	chr11	9233120	9233421	(125853201)	+	AluSg	SINE/Alu	2	303	(7)	585250
1399	24.3	7.4	3.6	chr11	9233452	9233895	(125852727)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	585251
11541	9.4	0.6	0.3	chr11	36528007	36529741	(98556881)	+	L1PA6	LINE/L1	2498	4237	(1909)	628574
1002	9.7	0.0	0.8	chr11	59565732	59565865	(75520757)	C	AluSz	SINE/Alu	(179)	133	1	656982
682	0.0	0.0	0.0	chr11	59566380	59566452	(75520170)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656983
12	24.4	0.0	4.3	chr11	64369351	64369397	(70717225)	+	(GGCCGG)n	Simple_repeat	1	47	(0)	665482
12	21.8	2.7	0.0	chr11	65471692	65471728	(69614894)	+	(CTGCCTG)n	Simple_repeat	1	38	(0)	667603
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
389	28.9	3.5	2.8	chr11	68372469	68372645	(66713977)	+	MIR	SINE/MIR	4	183	(85)	673293
16	23.4	1.4	6.7	chr11	68841685	68841758	(66244864)	+	(CCCCGCG)n	Simple_repeat	1	75	(0)	674057
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
1916	23.0	3.0	1.6	chr11	71904189	71908159	(63178463)	C	SATR2	Satellite	(168)	4029	1	678947
17	23.4	0.0	6.0	chr11	72239933	72239999	(62846623)	+	(GGCCCG)n	Simple_repeat	1	67	(0)	679594
12	23.5	3.3	4.8	chr11	72239979	72240038	(62846584)	+	(GGCGGA)n	Simple_repeat	1	62	(0)	679595
13	24.8	0.0	0.0	chr11	72240331	72240368	(62846254)	+	(TCCGCAC)n	Simple_repeat	1	38	(0)	679596
853	31.3	4.7	2.8	chr11	72454496	72454850	(62631772)	+	ERVL-E-int	LTR/ERVL	4248	4609	(1058)	679999
1136	31.3	8.0	2.3	chr11	72454869	72455444	(62631178)	+	ERVL-E-int	LTR/ERVL	4510	5121	(105)	679999
441	23.0	4.0	0.4	chr11	76152167	76152293	(58934329)	C	MIRc	SINE/MIR	(121)	147	11	687418
181	22.2	15.9	0.0	chr11	76152476	76152565	(58934057)	C	L2c	LINE/L2	(316)	3071	2965	687419
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
527	15.9	5.4	0.0	chr11	117175793	117175880	(17910742)	+	FLAM_A	SINE/Alu	8	100	(42)	750687
336	19.8	3.6	1.2	chr11	117176139	117176220	(17910402)	+	MIR3	SINE/MIR	111	194	(14)	750688
320	28.2	0.0	3.2	chr11	117176288	117176393	(17910229)	+	L2a	LINE/L2	3273	3426	(0)	750689
230	32.3	9.1	2.1	chr11	118972517	118972613	(16114009)	C	L1ME5	LINE/L1	(0)	6194	6083	753990
1730	7.7	11.9	2.2	chr11	118972614	118972886	(16113736)	C	AluSx3	SINE/Alu	(8)	303	1	753991
230	32.3	9.1	2.1	chr11	118972887	118972981	(16113641)	C	L1ME5	LINE/L1	(112)	6082	5988	753990
1161	19.0	15.2	0.0	chr11	129996315	129996603	(5090019)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	771137
13	8.1	3.9	0.0	chr11	129996641	129996666	(5089956)	+	(AGGAG)n	Simple_repeat	1	27	(0)	771138
220	24.7	0.0	12.5	chr11	130003832	130003919	(5082703)	+	MIRb	SINE/MIR	157	233	(35)	771151
1921	15.7	21.1	1.1	chr11	135075695	135076563	(10059)	+	TAR1	Satellite/telo	1	1042	(938)	778016
66	0.0	0.0	0.0	chr11	135076564	135076622	(10000)	+	(GTTAGG)n	Simple_repeat	1	59	(0)	778017
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
4164	11.4	20.3	1.5	chr12	10587	11592	(133263717)	C	TAR1	Satellite/telo	(400)	1711	469	778085
2203	12.7	0.0	0.6	chr12	424917	425230	(132850079)	C	AluJb	SINE/Alu	(0)	312	1	778731
467	30.4	7.0	1.3	chr12	425246	425472	(132849837)	C	ERV3-16A3_I-int	LTR/ERVL	(2374)	3293	3053	778732
3131	25.3	10.8	7.8	chr12	425462	425855	(132849454)	C	ERV3-16A3_I-int	LTR/ERVL	(2304)	2922	2507	778732
19221	4.2	0.6	0.6	chr12	1733611	1736914	(131538395)	C	L1PA4	LINE/L1	(3)	6152	2850	781188
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
1738	21.1	8.6	1.5	chr12	8446007	8447886	(124827423)	+	SATR1	Satellite	1	2014	(47)	792291
2617	19.9	5.5	6.3	chr12	12236255	12236402	(121038907)	+	L1MC4a	LINE/L1	6906	7043	(839)	797741
3925	17.6	10.4	3.0	chr12	12236447	12237280	(121038029)	C	MER21C	LTR/ERVL	(35)	903	1	797747
2095	10.3	3.6	3.0	chr12	14769187	14769488	(118505821)	+	AluSz	SINE/Alu	1	304	(8)	801893
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1113	19.4	0.9	0.0	chr12	27020470	27020686	(106254623)	+	MER20	DNA/hAT-Charlie	1	219	(0)	818857
361	17.1	1.4	1.4	chr12	27020792	27020862	(106254447)	+	Charlie4z	DNA/hAT-Charlie	94	164	(3)	818858
1326	25.4	3.2	7.9	chr12	27043819	27044393	(106230916)	C	ERV3-16A3_I-int	LTR/ERVL	(3451)	2216	1584	818890
3899	9.7	0.2	1.0	chr12	31121136	31121738	(102153571)	+	HERVE-int	LTR/ERV1	3249	3846	(3967)	824700
1951	16.5	6.0	0.3	chr12	31299734	31300061	(101975248)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	824972
1061	16.6	3.8	7.7	chr12	32166435	32166595	(101108714)	+	MER20	DNA/hAT-Charlie	62	218	(1)	826957
421	30.4	6.0	2.5	chr12	32166787	32166948	(101108361)	+	MIRb	SINE/MIR	93	260	(8)	826960
2564	5.8	0.7	0.0	chr12	32684942	32685236	(100590073)	C	AluY	SINE/Alu	(14)	297	1	827938
1773	16.6	8.8	9.6	chr12	32685237	32685359	(100589950)	C	L1MB7	LINE/L1	(514)	5670	5567	827936
2209	11.2	0.3	1.0	chr12	32685360	32685662	(100589647)	C	AluSx1	SINE/Alu	(11)	301	1	827939
1773	16.6	8.8	9.6	chr12	32685663	32685744	(100589565)	C	L1MB7	LINE/L1	(618)	5566	5474	827936
298	25.2	9.2	2.0	chr12	34348566	34348916	(98926393)	C	GSATII	Satellite/centr	(6)	376	1	830078
272	28.0	7.0	4.0	chr12	34349150	34349504	(98925805)	C	GSATII	Satellite/centr	(26)	365	1	830079
5016	12.8	14.7	1.6	chr12	46256662	46257596	(87017713)	C	MER41-int	LTR/ERV1	(4867)	1079	1	842028
3651	9.9	7.4	0.4	chr12	46257833	46258347	(87016962)	C	MER41A	LTR/ERV1	(0)	554	1	842028
3250	18.6	3.0	7.1	chr12	47962512	47963230	(85312079)	C	LTR8	LTR/ERV1	(0)	691	3	844504
2200	13.3	0.0	0.0	chr12	51162164	51162471	(82112838)	+	AluSx	SINE/Alu	1	308	(4)	850736
1750	23.4	2.7	17.1	chr12	51162472	51162515	(82112794)	+	L1M4	LINE/L1	1497	1533	(5984)	850733
2185	12.2	0.3	2.5	chr12	53032999	53033318	(80241991)	C	AluSp	SINE/Alu	(0)	313	1	853967
2508	8.7	0.0	0.0	chr12	53033332	53033640	(80241669)	C	AluSc	SINE/Alu	(0)	309	1	853968
13	10.3	2.9	5.6	chr12	54048381	54048415	(79226894)	+	(CTCCT)n	Simple_repeat	1	36	(0)	855781
378	27.0	9.4	9.1	chr12	56179604	56179685	(77095624)	+	Charlie7a	DNA/hAT-Charlie	6	93	(179)	859032
2432	7.5	0.3	0.0	chr12	56179686	56179980	(77095329)	C	AluSc8	SINE/Alu	(11)	300	5	859033
1704	10.7	0.0	0.5	chr12	56660695	56660918	(76614391)	+	AluSx	SINE/Alu	82	304	(8)	859983
573	18.6	8.1	0.0	chr12	56660997	56661109	(76614200)	C	MER8	DNA/TcMar-Tigger	(116)	123	1	859984
2423	7.7	0.3	0.6	chr12	57521181	57521493	(75753816)	+	AluSz	SINE/Alu	1	312	(0)	861461
1691	19.9	2.7	0.0	chr12	64681731	64682017	(68593292)	+	AluJo	SINE/Alu	1	295	(17)	871618
2541	3.3	1.3	2.9	chr12	64682281	64682587	(68592722)	+	AluY	SINE/Alu	1	302	(9)	871619
349	30.9	6.8	1.9	chr12	67321952	67322106	(65953203)	+	L1M5	LINE/L1	4114	4276	(1870)	875732
14585	15.5	3.2	1.2	chr12	67322155	67325352	(65949957)	+	L1PA12	LINE/L1	12	4102	(4053)	875733
25951	4.7	1.0	0.1	chr12	70299226	70305316	(62969993)	C	L1PA4	LINE/L1	(3)	6152	4	880701
1540	15.8	6.5	0.9	chr12	82499601	82499911	(50775398)	+	MLT2A2	LTR/ERVL	16	342	(212)	897833
31	5.5	0.0	0.0	chr12	82499912	82499949	(50775360)	+	(T)n	Simple_repeat	1	38	(0)	897834
939	26.4	11.1	4.4	chr12	82499950	82499998	(50775311)	+	MLT2A2	LTR/ERVL	343	403	(151)	897833
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
19	11.4	2.6	0.0	chr12	85280930	85280967	(47994342)	+	(AAACAAA)n	Simple_repeat	1	39	(0)	901406
850	21.4	0.0	4.8	chr12	104298934	104299100	(28976209)	C	MER8	DNA/TcMar-Tigger	(0)	239	81	932303
311	18.0	0.0	0.0	chr12	104299170	104299219	(28976090)	C	MER8	DNA/TcMar-Tigger	(189)	50	1	932303
410	29.2	5.1	0.8	chr12	104299223	104299353	(28975956)	C	MIRb	SINE/MIR	(110)	158	22	932304
2255	18.0	13.3	0.7	chr12	105103508	105103948	(28171361)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	933850
291	36.5	7.0	5.3	chr12	105103949	105104050	(28171259)	C	L2c	LINE/L2	(104)	3283	3150	933849
1120	8.5	0.0	0.0	chr12	105104072	105104200	(28171109)	+	AluSx	SINE/Alu	1	129	(183)	933851
1037	20.3	2.3	1.9	chr12	109878303	109878518	(23396791)	C	MER20	DNA/hAT-Charlie	(2)	217	1	943553
2106	12.8	0.0	1.0	chr12	110578865	110579162	(22696147)	+	AluSz6	SINE/Alu	2	296	(16)	945040
2318	8.5	0.0	4.9	chr12	110579731	110580059	(22695250)	+	AluSq2	SINE/Alu	1	313	(0)	945041
180	23.6	8.2	8.2	chr12	110580115	110580211	(22695098)	C	MIRc	SINE/MIR	(115)	153	57	945042
25	15.2	2.7	5.3	chr12	110689134	110689220	(22586089)	+	(CCCGCC)n	Simple_repeat	1	84	(0)	945290
629	9.5	3.1	0.0	chr12	112401873	112401967	(20873342)	C	L1MC2	LINE/L1	(130)	6214	6117	949120
2514	16.5	2.2	4.8	chr12	112401998	112402499	(20872810)	C	L1MC2	LINE/L1	(212)	6132	5644	949120
216	33.3	5.1	2.6	chr12	114735542	114735655	(18539654)	+	MIRc	SINE/MIR	22	138	(130)	954385
337	25.2	3.6	12.3	chr12	120283650	120283675	(12991634)	+	MIRb	SINE/MIR	46	75	(193)	966605
1992	14.8	0.3	0.3	chr12	120283676	120283973	(12991336)	+	AluSx1	SINE/Alu	1	298	(14)	966606
2436	8.7	1.0	0.0	chr12	121208721	121209030	(12066279)	+	AluSq	SINE/Alu	1	313	(0)	968856
1704	11.7	8.4	2.1	chr12	121209583	121209753	(12065556)	C	AluJr	SINE/Alu	(1)	311	139	968857
15	22.1	0.0	2.3	chr12	121793406	121793455	(11481854)	+	(GCTCTGG)n	Simple_repeat	1	48	(0)	970345
207	27.9	6.1	16.5	chr12	122084848	122084998	(11190311)	C	MIRc	SINE/MIR	(56)	212	80	971068
1005	15.9	6.1	1.2	chr12	122092897	122095314	(11179995)	+	(GT)n	Simple_repeat	1	2566	(0)	971084
2096	6.6	8.4	0.0	chr12	122499270	122499483	(10775826)	C	AluSg	SINE/Alu	(13)	297	83	972000
35	7.7	1.8	0.0	chr12	122499484	122499538	(10775771)	+	(CCTCATGAT)n	Simple_repeat	1	56	(0)	972001
2096	6.6	8.4	0.0	chr12	122499539	122499595	(10775714)	C	AluSg	SINE/Alu	(253)	57	1	972000
342	24.4	3.9	9.6	chr12	122499596	122499639	(10775670)	+	L1ME2z	LINE/L1	6398	6440	(4)	971999
143	29.9	4.8	0.2	chr12	123654089	123654687	(9620622)	+	(GT)n	Simple_repeat	1	628	(0)	974644
1792	25.0	7.4	8.3	chr12	124774624	124774882	(8500427)	+	L1ME1	LINE/L1	5428	5718	(461)	976807
2142	15.9	1.6	2.7	chr12	124774883	124775250	(8500059)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	976808
256	28.6	7.7	3.2	chr12	124939171	124939339	(8335970)	+	MIRb	SINE/MIR	78	256	(6)	977199
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
248	21.8	1.3	3.7	chr12	124940188	124940268	(8335041)	C	MER5A	DNA/hAT-Charlie	(63)	126	48	977202
2323	7.0	0.0	1.7	chr12	124989555	124989852	(8285457)	+	AluSg7	SINE/Alu	4	296	(13)	977320
13	4.0	3.3	6.5	chr12	131922499	131922528	(1352781)	+	(GCCCT)n	Simple_repeat	1	31	(0)	988816
294	29.0	14.7	1.4	chr12	132131071	132131217	(1144092)	+	Charlie2b	DNA/hAT-Charlie	1986	2155	(627)	989124
1751	12.9	1.8	4.7	chr12	132131221	132131743	(1143566)	+	LTR3A	LTR/ERVK	5	475	(9)	989125
465	28.9	3.4	0.6	chr12	132154674	132154847	(1120462)	+	MSTD	LTR/ERVL-MaLR	218	396	(0)	989140
17	22.0	5.5	1.7	chr12	132154981	132155035	(1120274)	+	(CT)n	Simple_repeat	1	58	(0)	989141
21	18.3	0.0	0.0	chr12	132236535	132236578	(1038731)	+	(CCTT)n	Simple_repeat	1	44	(0)	989244
271	27.0	4.2	0.0	chr12	132475907	132476043	(799266)	C	MLT1B	LTR/ERVL-MaLR	(81)	309	167	989515
623	24.9	3.9	0.0	chr12	132476331	132476503	(798806)	C	MLT1B	LTR/ERVL-MaLR	(210)	180	1	989515
14	20.1	0.0	0.0	chr12	132583364	132583397	(691912)	+	(CCCCGC)n	Simple_repeat	1	34	(0)	989620
413	25.0	7.9	1.5	chr12	132685333	132685462	(589847)	C	MIRb	SINE/MIR	(6)	262	124	989766
244	27.4	9.1	0.0	chr12	132685489	132685568	(589741)	+	MIRb	SINE/MIR	159	252	(16)	989767
2385	9.1	1.0	0.0	chr12	132691040	132691347	(583962)	C	AluY	SINE/Alu	(0)	311	1	989779
258	19.7	2.9	0.0	chr12	132792517	132792582	(482727)	+	MER5A1	DNA/hAT-Charlie	47	114	(52)	989950
632	17.8	10.6	0.0	chr12	132888328	132888445	(386864)	+	FLAM_C	SINE/Alu	1	132	(11)	990112
23	30.3	0.0	0.0	chr12	132888474	132888538	(386771)	+	(AT)n	Simple_repeat	1	65	(0)	990113
200	34.6	4.6	3.7	chr12	132987275	132987382	(287927)	C	L2c	LINE/L2	(45)	3342	3234	990299
13	22.5	0.0	0.0	chr12	133236238	133236273	(39036)	+	(CGGCGC)n	Simple_repeat	1	36	(0)	990728
728	16.0	6.0	3.4	chr13	20392371	20394411	(93969917)	+	(CA)n	Simple_repeat	1	2164	(0)	994197
36	19.4	7.6	0.8	chr13	23946036	23946154	(90418174)	+	A-rich	Low_complexity	1	128	(0)	999564
317	22.9	0.0	0.0	chr13	27908520	27908580	(86455748)	C	MER2	DNA/TcMar-Tigger	(281)	64	4	1005733
1958	22.0	8.6	1.8	chr13	41425016	41426667	(72937661)	+	SATR1	Satellite	1	1763	(1)	1025850
2041	18.8	3.2	5.6	chr13	41427055	41431198	(72933130)	+	SATR2	Satellite	1	4047	(47)	1025852
2052	18.2	10.5	1.7	chr13	41453854	41455553	(72908775)	+	SATR1	Satellite	1	1849	(0)	1025872
215	31.0	21.6	1.7	chr13	49496649	49496825	(64867503)	C	L2b	LINE/L2	(34)	3341	3120	1038489
1642	5.8	1.9	0.0	chr13	49496831	49497035	(64867293)	C	AluSp	SINE/Alu	(9)	304	96	1038490
1084	30.7	11.0	3.1	chr13	49497239	49498196	(64866132)	+	L2a	LINE/L2	2352	3410	(16)	1038491
581	25.1	21.7	6.3	chr13	61893320	61893591	(52470737)	+	MSTD	LTR/ERVL-MaLR	1	340	(56)	1055332
1888	12.1	0.0	0.0	chr13	61893592	61893839	(52470489)	C	AluSc5	SINE/Alu	(28)	281	34	1055333
1936	19.4	8.6	2.6	chr13	61941836	61944414	(52419914)	C	SATR1	Satellite	(44)	2733	1	1055386
472	28.4	9.9	3.4	chr13	62003794	62004114	(52360214)	+	L1M4	LINE/L1	2200	2543	(4197)	1055473
2294	11.7	0.0	0.0	chr13	62104049	62104347	(52259981)	C	AluSc8	SINE/Alu	(12)	299	1	1055585
2768	17.7	14.2	7.5	chr13	64879796	64880504	(49483824)	C	LTR1	LTR/ERV1	(18)	765	1	1059088
205	24.1	3.6	0.0	chr13	66483537	66483590	(47880738)	+	UCON71_Crp	Unknown	10	65	(212)	1061073
4809	12.5	4.1	2.3	chr13	66483644	66484465	(47879863)	+	LTR1A2	LTR/ERV1	1	837	(0)	1061074
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
1516	21.3	8.9	3.6	chr13	67915011	67915889	(46448439)	C	SATR1	Satellite	(65)	911	1	1062864
276	37.0	4.8	0.0	chr13	72781432	72781550	(41582778)	+	MIRc	SINE/MIR	13	137	(131)	1069318
12	7.3	10.3	0.0	chr13	78596284	78596312	(35768016)	+	(CAGG)n	Simple_repeat	1	32	(0)	1077755
13	8.6	10.3	2.3	chr13	78596534	78596572	(35767756)	+	(GAGCTGC)n	Simple_repeat	1	43	(0)	1077756
19	26.2	0.0	3.0	chr13	79405803	79405869	(34958459)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	1078870
4194	13.8	1.1	1.4	chr13	81513785	81514482	(32849846)	+	MER50B	LTR/ERV1	1	696	(1)	1081660
7364	12.9	13.9	3.2	chr13	85204732	85206134	(29158194)	+	LTR12C	LTR/ERV1	3	1579	(0)	1086229
21295	8.7	1.2	1.6	chr13	87043479	87047451	(27316877)	+	L1PA7	LINE/L1	2514	6467	(2)	1088485
277	30.1	0.0	0.0	chr13	93233440	93233512	(21130816)	C	L2a	LINE/L2	(1)	3425	3353	1096616
13	25.9	3.9	0.0	chr13	93233775	93233825	(21130503)	+	G-rich	Low_complexity	1	53	(0)	1096617
1225	24.1	6.4	5.2	chr13	93233868	93234391	(21129937)	+	LTR55	LTR/ERVL?	16	546	(2)	1096618
2393	9.7	0.0	0.3	chr13	98228077	98228385	(16135943)	+	AluSq2	SINE/Alu	1	308	(5)	1104333
3882	16.3	5.0	3.2	chr13	98228386	98228440	(16135888)	+	L1MB2	LINE/L1	6131	6171	(0)	1104332
12	23.4	4.6	4.4	chr13	100089149	100089213	(14275115)	+	(CGCTGG)n	Simple_repeat	1	68	(0)	1107378
665	25.4	5.3	5.0	chr13	111312770	111313051	(3051277)	C	MLT1E3	LTR/ERVL-MaLR	(80)	544	262	1122386
238	14.6	5.9	0.0	chr13	111313550	111313597	(3050731)	C	MLT1E1A	LTR/ERVL-MaLR	(629)	51	1	1122387
80	21.0	3.6	0.0	chr13	113034525	113034720	(1329608)	+	(GCCCTC)n	Simple_repeat	1	203	(0)	1124147
1722	13.6	0.8	0.4	chr13	113348197	113348447	(1015881)	+	AluJb	SINE/Alu	28	279	(33)	1124560
2525	4.4	0.0	0.3	chr13	113412182	113412477	(951851)	C	AluY	SINE/Alu	(16)	295	1	1124658
202	34.7	5.0	2.1	chr13	113412533	113412629	(951699)	+	L2a	LINE/L2	3289	3388	(38)	1124659
2362	8.7	0.0	0.3	chr13	113592157	113592456	(771872)	C	AluSp	SINE/Alu	(14)	299	1	1124900
13	25.0	5.1	1.6	chr13	113600540	113600598	(763730)	+	(GGACCCA)n	Simple_repeat	1	62	(0)	1124904
1098	20.6	13.1	0.7	chr13	113605405	113605711	(758617)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	198	1124911
988	25.0	5.7	2.6	chr13	113606261	113606531	(757797)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	86	1124912
6769	21.1	7.2	3.5	chr13	113644316	113645421	(718907)	+	L1MB3	LINE/L1	4137	5283	(1093)	1124930
608	16.7	0.9	5.3	chr13	113645423	113645536	(718792)	+	AluSx	SINE/Alu	1	109	(203)	1124932
306	12.0	0.0	0.0	chr13	113645537	113645586	(718742)	+	L1M4c	LINE/L1	1795	1844	(4540)	1124933
9431	1.8	22.6	0.4	chr13	114352578	114353941	(10387)	+	TAR1	Satellite/telo	314	2069	(42)	1125575
286	4.0	1.6	3.3	chr13	114353942	114354328	(10000)	+	(AGGGTT)n	Simple_repeat	1	393	(0)	1125576
416	21.6	6.7	0.0	chr14	18660785	18660881	(88382837)	C	LTR78	LTR/ERV1	(923)	381	278	1126000
740	0.0	0.0	0.0	chr14	20625370	20625451	(86418267)	+	tRNA-Leu-CTA_	tRNA	1	82	(3)	1128366
22	14.0	0.0	0.0	chr14	20625936	20625975	(86417743)	+	(GATG)n	Simple_repeat	1	40	(0)	1128367
635	1.4	0.0	0.0	chr14	20633006	20633078	(86410640)	+	tRNA-Pro-CCA	tRNA	1	73	(2)	1128377
11	10.0	5.7	2.7	chr14	20633079	20633108	(86410610)	+	(TTCTCT)n	Simple_repeat	5	35	(0)	1128378
563	0.0	0.0	18.0	chr14	20683273	20683361	(86360357)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	1128459
28	25.1	0.0	0.0	chr14	23275618	23275688	(83768030)	+	(TCC)n	Simple_repeat	1	71	(0)	1132602
2079	10.1	2.6	1.0	chr14	34552957	34553254	(72490464)	+	AluSz	SINE/Alu	5	307	(5)	1148074
2323	5.6	0.7	1.0	chr14	34553347	34553634	(72490084)	+	AluSz	SINE/Alu	1	287	(25)	1148075
1638	22.3	10.0	5.7	chr14	51742819	51744346	(55299372)	+	SATR1	Satellite	1	1806	(876)	1171921
186	32.1	11.7	3.1	chr14	56120609	56120865	(50922853)	C	L2a	LINE/L2	(24)	3402	3121	1178824
373	26.4	4.3	1.8	chr14	56288892	56289003	(50754715)	C	L2a	LINE/L2	(0)	3426	3312	1179014
15	24.5	5.8	1.4	chr14	60515657	60515725	(46527993)	+	(GGCCTG)n	Simple_repeat	1	73	(0)	1185116
694	25.2	6.0	10.6	chr14	60516198	60516583	(46527135)	+	L2c	LINE/L2	3017	3383	(4)	1185117
600	7.8	1.3	0.0	chr14	63612330	63612406	(43431312)	C	AluYa8	SINE/Alu	(15)	295	218	1189617
1762	10.7	0.4	0.0	chr14	63612408	63612641	(43431077)	C	AluSx	SINE/Alu	(44)	268	34	1189618
1184	26.5	5.3	1.3	chr14	63612696	63613001	(43430717)	+	HAL1b	LINE/L1	179	497	(1924)	1189619
2141	14.7	8.3	3.4	chr14	63677443	63677632	(43366086)	C	LTR47A2	LTR/ERVL	(1)	431	236	1189782
2327	10.7	1.3	0.3	chr14	63677633	63677941	(43365777)	+	AluSz	SINE/Alu	1	312	(0)	1189783
6595	11.5	7.5	0.1	chr14	70345039	70346142	(36697576)	+	HERVH48-int	LTR/ERV1	1	1192	(5462)	1201046
13299	15.1	2.0	1.3	chr14	70346131	70349924	(36693794)	+	HERVH48-int	LTR/ERV1	1508	5666	(988)	1201046
483	25.3	4.0	0.2	chr14	73448831	73448926	(33594792)	C	MER2	DNA/TcMar-Tigger	(0)	345	131	1206295
985	15.3	4.9	0.6	chr14	73448927	73449097	(33594621)	+	MER2	DNA/TcMar-Tigger	1	179	(166)	1206296
282	17.5	6.0	0.0	chr14	75070088	75070150	(31973568)	+	MIR3	SINE/MIR	90	156	(52)	1209671
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
656	26.1	0.0	0.0	chr14	100808664	100808793	(6234925)	C	FLAM_A	SINE/Alu	(12)	130	1	1252440
14	19.3	2.3	2.3	chr14	100827054	100827096	(6216622)	+	G-rich	Low_complexity	1	44	(0)	1252459
2659	5.8	0.0	0.3	chr14	101984651	101984962	(5058756)	+	AluY	SINE/Alu	1	311	(0)	1254011
1991	8.8	1.4	6.1	chr14	101984963	101985055	(5058663)	C	AluSx1	SINE/Alu	(195)	117	25	1254010
445	31.9	4.1	0.6	chr14	101985119	101985282	(5058436)	+	MIR	SINE/MIR	28	197	(65)	1254012
15	9.7	0.0	0.0	chr14	102487423	102487444	(4556274)	+	(TG)n	Simple_repeat	1	22	(0)	1255022
7064	18.2	3.3	7.2	chr14	103040748	103041442	(4002276)	+	L1MB7	LINE/L1	4488	5147	(999)	1256088
2737	3.8	0.0	1.0	chr14	103272795	103273108	(3770610)	+	AluY	SINE/Alu	1	311	(0)	1256471
41	14.4	2.3	2.2	chr14	103273109	103273213	(3770505)	+	(AAGGC)n	Simple_repeat	1	105	(0)	1256472
12	24.5	2.2	2.2	chr14	103928305	103928349	(3115369)	+	G-rich	Low_complexity	1	46	(0)	1257815
19	19.5	1.8	3.5	chr14	103928650	103928706	(3115012)	+	(CCCCGG)n	Simple_repeat	1	58	(0)	1257816
13	15.8	0.0	7.3	chr14	103928732	103928772	(3114946)	+	(GCGG)n	Simple_repeat	1	41	(0)	1257817
1111	19.2	2.2	0.0	chr14	104652814	104653037	(2390681)	+	L1MC1	LINE/L1	5811	6039	(294)	1258654
867	24.7	0.9	4.8	chr14	104653034	104653263	(2390455)	+	L1MB3	LINE/L1	5543	5763	(420)	1258655
1963	14.0	0.7	0.3	chr14	104653684	104653976	(2389742)	+	AluJb	SINE/Alu	1	294	(18)	1258656
307	29.4	9.8	1.6	chr14	104672274	104672394	(2371324)	+	L1ME3A	LINE/L1	7123	7254	(10)	1258689
301	34.6	10.7	2.2	chr14	104799432	104799567	(2244151)	+	MIR	SINE/MIR	36	184	(78)	1258823
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
13	21.1	2.6	0.0	chr14	105487690	105487727	(1555991)	+	(CCCG)n	Simple_repeat	1	39	(0)	1259741
1815	15.2	1.7	2.0	chr15	28783593	28783888	(73207301)	C	AluSp	SINE/Alu	(17)	296	2	1274503
993	8.4	1.5	0.0	chr15	28783898	28784028	(73207161)	C	AluSp	SINE/Alu	(180)	133	1	1274504
675	17.9	0.8	0.8	chr15	28784057	28784173	(73207016)	+	AluJb	SINE/Alu	1	117	(195)	1274505
1880	13.5	1.0	6.0	chr15	28784175	28784492	(73206697)	C	AluSp	SINE/Alu	(11)	302	1	1274506
1409	16.3	0.7	10.1	chr15	28784520	28784630	(73206559)	+	AluJb	SINE/Alu	1	110	(202)	1274507
1971	14.1	0.7	3.2	chr15	28784631	28784943	(73206246)	C	AluSp	SINE/Alu	(8)	305	1	1274508
4173	20.2	3.2	1.4	chr15	29021499	29022368	(72968821)	C	L1MA10	LINE/L1	(39)	6295	5410	1274883
16	31.7	0.0	3.8	chr15	32717844	32717922	(69273267)	+	G-rich	Low_complexity	1	79	(0)	1280344
1817	19.9	8.3	2.7	chr15	40130969	40133678	(61857511)	+	SATR1	Satellite	1	2860	(43)	1290729
36	0.0	7.7	1.8	chr15	41412359	41412410	(60578779)	+	(AAAT)n	Simple_repeat	1	56	(0)	1293297
1637	25.4	7.1	2.5	chr15	41412411	41412934	(60578255)	+	HERV16-int	LTR/ERVL	396	945	(4051)	1293298
2090	13.8	1.4	1.7	chr15	43482354	43482486	(58508703)	+	AluSz	SINE/Alu	1	136	(176)	1297076
2583	7.5	0.0	0.0	chr15	43482487	43482780	(58508409)	+	AluSc8	SINE/Alu	1	294	(17)	1297077
15	0.0	2.9	8.6	chr15	52112802	52112835	(49878354)	+	(CCGGCC)n	Simple_repeat	1	35	(0)	1310743
538	26.7	1.2	7.3	chr15	63277932	63278109	(38713080)	+	Charlie4z	DNA/hAT-Charlie	1	167	(0)	1328276
436	21.4	5.2	11.8	chr15	63278121	63278306	(38712883)	+	MER5B	DNA/hAT-Charlie	2	174	(4)	1328277
3983	28.4	9.8	7.7	chr15	67935216	67936765	(34054424)	+	ERV3-16A3_I-int	LTR/ERVL	1130	2712	(2514)	1337413
482	25.2	1.4	10.1	chr15	71749576	71749659	(30241530)	C	MER5A1	DNA/hAT-Charlie	(21)	145	71	1344287
1787	10.6	3.2	8.8	chr15	71749660	71750028	(30241161)	C	AluJb	SINE/Alu	(0)	312	1	1344288
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
31	24.4	2.6	6.4	chr15	72319943	72320095	(29671094)	+	G-rich	Low_complexity	1	157	(0)	1345247
1038	22.8	8.8	3.0	chr15	73917883	73918212	(28072977)	C	L2a	LINE/L2	(0)	3426	3076	1347940
659	24.9	7.8	1.1	chr15	73918256	73918446	(28072743)	C	L2a	LINE/L2	(475)	2944	2740	1347940
524	27.9	10.7	2.8	chr15	73918447	73918728	(28072461)	+	L1M5	LINE/L1	5361	5667	(457)	1347936
288	25.6	24.4	0.6	chr15	73918730	73918894	(28072295)	C	MIR	SINE/MIR	(8)	254	38	1347941
240	27.8	10.2	0.0	chr15	73918913	73919027	(28072162)	+	L1M5	LINE/L1	5670	5797	(327)	1347936
443	23.1	1.8	2.1	chr15	73919128	73919264	(28071925)	+	L1ME3A	LINE/L1	6034	6237	(5)	1347942
2391	6.7	0.0	1.0	chr15	73919268	73919565	(28071624)	+	AluY	SINE/Alu	1	295	(16)	1347943
17767	7.6	0.9	0.3	chr15	75909776	75913129	(26078060)	C	L1PA7	LINE/L1	(0)	6154	2787	1351728
827	28.0	20.8	1.0	chr15	76914338	76915016	(25076173)	+	ERVL-E-int	LTR/ERVL	2984	3744	(1923)	1353216
1394	22.0	8.7	3.9	chr15	81118757	81119429	(20871760)	C	MER101-int	LTR/ERV1	(1299)	5032	3925	1360747
218	26.2	3.6	2.4	chr15	83446185	83446266	(18544923)	C	MIR3	SINE/MIR	(70)	138	56	1364644
12	18.6	2.1	6.1	chr15	89648493	89648540	(12342649)	+	(GCGGCC)n	Simple_repeat	1	49	(0)	1374614
13	17.4	2.3	4.5	chr15	89648579	89648621	(12342568)	+	(CCGCTCG)n	Simple_repeat	1	44	(0)	1374615
2912	23.1	11.4	3.3	chr15	99635463	99636354	(2354835)	C	L1ME3A	LINE/L1	(16)	6157	5186	1390398
1631	19.4	3.1	0.3	chr15	99636355	99636638	(2354551)	C	AluJr	SINE/Alu	(20)	292	1	1390399
2912	24.5	4.6	3.7	chr15	99636639	99637494	(2353695)	C	L1ME3A	LINE/L1	(961)	5185	4321	1390398
603	12.9	15.1	0.0	chr15	100638363	100638463	(1352726)	+	HY1	scRNA	1	119	(0)	1391742
237	30.1	3.9	5.4	chr15	100638503	100638632	(1352557)	C	MER103C	DNA/hAT-Charlie	(60)	237	110	1391743
1912	8.6	0.0	0.4	chr15	100638678	100638934	(1352255)	C	L1PA8	LINE/L1	(5)	6167	5912	1391744
251	32.6	5.4	3.3	chr15	101490417	101490597	(500592)	+	MIR	SINE/MIR	39	230	(38)	1392852
5212	12.1	22.1	0.7	chr15	101979520	101980763	(10426)	+	TAR1	Satellite/telo	483	2068	(43)	1393518
328	3.1	1.9	3.2	chr15	101980765	101981189	(10000)	+	(GGTTAG)n	Simple_repeat	1	433	(0)	1393519
40	5.5	3.5	0.0	chr16	10001	10057	(90328288)	+	(TAACCC)n	Simple_repeat	1	59	(0)	1394055
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
241	31.9	5.4	1.9	chr16	60638	60844	(90277501)	+	L1ME4b	LINE/L1	5691	5847	(277)	1394127
13	16.9	5.0	6.3	chr16	61317	61376	(90276969)	+	(GCCCCC)n	Simple_repeat	1	63	(0)	1394128
325	30.8	4.4	2.3	chr16	229684	229816	(90108529)	+	MIR	SINE/MIR	56	191	(71)	1394420
30	0.0	0.0	0.0	chr16	229827	229854	(90108491)	+	(TTTA)n	Simple_repeat	1	28	(0)	1394421
784	17.7	2.1	0.7	chr16	229860	230000	(90108345)	C	AluJb	SINE/Alu	(35)	277	135	1394422
13	17.6	4.0	5.8	chr16	275600	275649	(90062696)	+	(GCG)n	Simple_repeat	1	52	(0)	1394509
17	16.9	0.0	4.5	chr16	275632	275675	(90062670)	+	(GGCCG)n	Simple_repeat	1	44	(0)	1394510
19	12.0	0.0	2.6	chr16	275944	275981	(90062364)	+	(CGCCC)n	Simple_repeat	1	38	(0)	1394511
21	17.8	3.9	0.0	chr16	340024	340075	(89998270)	+	(TTC)n	Simple_repeat	1	54	(0)	1394610
16	27.1	0.0	0.0	chr16	360995	361034	(89977311)	+	(TT)n	Simple_repeat	1	40	(0)	1394640
970	28.7	1.4	10.1	chr16	417644	417718	(89920627)	C	L1ME2	LINE/L1	(329)	6015	5951	1394725
1942	12.2	5.9	0.0	chr16	417719	418004	(89920341)	C	AluSz	SINE/Alu	(5)	307	4	1394726
970	29.2	4.0	8.3	chr16	418005	418382	(89919963)	C	L1ME2	LINE/L1	(211)	5953	5601	1394725
21	6.4	0.0	2.9	chr16	448927	448961	(89889384)	+	(AATA)n	Simple_repeat	1	35	(0)	1394806
235	16.7	2.3	0.0	chr16	449005	449046	(89889299)	+	MLT1D	LTR/ERVL-MaLR	1	43	(462)	1394807
290	21.9	18.5	0.0	chr16	449099	449226	(89889119)	+	L2a	LINE/L2	2914	3070	(356)	1394808
644	25.8	8.4	2.2	chr16	449243	449463	(89888882)	C	MLT1E1A	LTR/ERVL-MaLR	(117)	537	296	1394809
1156	12.5	1.2	2.8	chr16	449488	449663	(89888682)	+	AluJo	SINE/Alu	127	299	(13)	1394810
1625	15.6	6.8	3.7	chr16	461034	461360	(89876985)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	1394836
2008	12.3	2.4	0.0	chr16	823041	823325	(89515020)	C	AluSg	SINE/Alu	(18)	292	1	1395251
27	16.9	0.0	0.0	chr16	1040090	1040136	(89298209)	+	A-rich	Low_complexity	1	47	(0)	1395435
227	25.4	4.1	0.0	chr16	1051450	1051520	(89286825)	C	MER117	DNA/hAT-Charlie	(15)	182	109	1395445
367	22.3	11.8	8.2	chr16	1051912	1051991	(89286354)	C	MLT1C	LTR/ERVL-MaLR	(209)	181	101	1395446
315	35.6	2.0	0.0	chr16	1166462	1166607	(89171738)	C	L1MB7	LINE/L1	(12)	6172	6024	1395565
421	33.8	3.3	0.0	chr16	1166809	1167012	(89171333)	C	L1MB7	LINE/L1	(405)	5773	5563	1395565
11	21.0	2.5	2.4	chr16	1209274	1209313	(89129032)	+	(GCCGCCT)n	Simple_repeat	1	41	(0)	1395592
17	7.9	0.0	0.0	chr16	1691778	1691804	(88646541)	+	(GGGGT)n	Simple_repeat	1	27	(0)	1396264
758	17.1	0.8	0.0	chr16	1928434	1928556	(88409789)	+	AluJo	SINE/Alu	1	124	(188)	1396662
1871	16.9	1.0	0.0	chr16	1928574	1928863	(88409482)	+	AluJo	SINE/Alu	2	294	(18)	1396663
2473	6.5	0.0	0.3	chr16	1928867	1929172	(88409173)	+	AluY	SINE/Alu	1	305	(6)	1396664
12	15.9	6.5	4.1	chr16	1979375	1979420	(88358925)	+	(GCCCC)n	Simple_repeat	1	49	(0)	1396741
11	9.5	11.8	0.0	chr16	1992691	1992724	(88345621)	+	(GCGCACG)n	Simple_repeat	1	38	(0)	1396754
675	25.5	5.2	4.1	chr16	2242489	2242754	(88095591)	+	MLT1C	LTR/ERVL-MaLR	1	269	(198)	1397092
394	26.2	2.8	0.0	chr16	2242815	2242917	(88095428)	+	MLT1C	LTR/ERVL-MaLR	269	374	(16)	1397092
417	24.2	7.8	16.2	chr16	2342360	2342600	(87995745)	+	MIRb	SINE/MIR	40	258	(10)	1397250
437	22.1	9.6	2.4	chr16	2759706	2759830	(87578515)	C	L2c	LINE/L2	(5)	3382	3248	1397885
21	18.1	0.0	0.0	chr16	2759843	2759880	(87578465)	+	(T)n	Simple_repeat	1	38	(0)	1397886
185	28.9	12.6	1.2	chr16	2766517	2766600	(87571745)	C	MamRTE1	LINE/RTE-BovB	(2533)	1279	1185	1397887
20	17.4	0.0	4.1	chr16	2967549	2967597	(87370748)	+	(GCT)n	Simple_repeat	1	49	(0)	1398273
426	15.7	0.0	0.0	chr16	3152609	3152678	(87185667)	C	tRNA-Pro-CCY	tRNA	(4)	71	2	1398602
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
2155	8.0	1.0	0.0	chr16	3192064	3192352	(87145993)	C	AluY	SINE/Alu	(19)	292	1	1398700
2006	9.1	3.7	0.0	chr16	3192940	3193225	(87145120)	C	AluSz	SINE/Alu	(15)	297	1	1398701
2933	15.9	4.5	6.8	chr16	3616654	3617059	(86721286)	+	L1M4	LINE/L1	4659	5050	(1096)	1399494
2272	8.1	5.1	0.0	chr16	3617060	3617356	(86720989)	+	AluSp	SINE/Alu	1	313	(0)	1399497
2933	15.9	4.5	6.8	chr16	3617357	3617551	(86720794)	+	L1M4	LINE/L1	5051	5249	(897)	1399494
376	13.5	0.0	0.0	chr16	3862406	3862457	(86475888)	C	AluYj4	SINE/Alu	(37)	274	223	1399938
13	17.5	0.0	2.9	chr16	3862786	3862819	(86475526)	+	(TGCC)n	Simple_repeat	1	34	(0)	1399939
355	34.8	9.0	1.6	chr16	4102173	4102356	(86235989)	C	MIRb	SINE/MIR	(40)	228	30	1400438
2381	9.8	0.3	0.0	chr16	4102418	4102724	(86235621)	C	AluSp	SINE/Alu	(5)	308	1	1400439
64	12.6	0.8	3.2	chr16	5500073	5500194	(84838151)	+	(CCTC)n	Simple_repeat	1	123	(0)	1403414
35	11.0	0.0	0.0	chr16	5500196	5500255	(84838090)	+	(CATTC)n	Simple_repeat	1	60	(0)	1403415
1598	17.6	0.8	0.4	chr16	5500260	5500521	(84837824)	C	AluJr	SINE/Alu	(49)	263	1	1403416
2089	12.1	1.6	0.7	chr16	14955495	14955801	(75382544)	C	AluSx	SINE/Alu	(2)	310	1	1423296
1091	25.0	0.0	2.1	chr16	14955806	14956095	(75382250)	C	L1MC4a	LINE/L1	(1)	7881	7598	1423297
526	28.1	12.4	0.4	chr16	19071612	19071841	(71266504)	C	MER102c	DNA/hAT-Charlie	(50)	280	3	1432618
452	28.5	1.2	2.7	chr16	19072188	19072375	(71265970)	+	MER106B	DNA/hAT-Charlie	897	1004	(55)	1432619
20	11.2	0.0	0.0	chr16	19621961	19621990	(70716355)	+	(TG)n	Simple_repeat	1	30	(0)	1433971
18	18.9	0.0	4.2	chr16	19621991	19622006	(70716339)	+	(TATGTG)n	Simple_repeat	3	48	(0)	1433972
275	30.6	2.7	3.6	chr16	19622014	19622088	(70716257)	+	L2a	LINE/L2	3310	3387	(39)	1433973
1054	16.7	9.2	11.5	chr16	19622089	19622140	(70716205)	C	MER8	DNA/TcMar-Tigger	(1)	238	199	1433974
2261	10.0	1.0	0.0	chr16	19622141	19622441	(70715904)	C	AluSx	SINE/Alu	(8)	304	1	1433975
1054	16.7	9.2	11.5	chr16	19622442	19622632	(70715713)	C	MER8	DNA/TcMar-Tigger	(41)	198	1	1433974
345	22.7	6.0	6.8	chr16	19886270	19886387	(70451958)	+	L2a	LINE/L2	3304	3420	(6)	1434582
548	29.0	5.6	8.8	chr16	22296590	22296731	(68041614)	+	L1ME3G	LINE/L1	761	913	(11)	1439782
16	21.6	0.0	0.0	chr16	25257910	25257941	(65080404)	+	G-rich	Low_complexity	1	32	(0)	1446590
197	19.2	3.7	7.1	chr16	25258549	25258604	(65079741)	C	L2a	LINE/L2	(24)	3402	3349	1446591
10306	12.4	1.0	0.0	chr16	30102244	30103835	(60234510)	+	HERVIP10B3-int	LTR/ERV1	5996	7603	(0)	1457253
13	25.3	2.0	2.0	chr16	30585555	30585603	(59752742)	+	G-rich	Low_complexity	1	50	(0)	1458400
993	16.6	0.0	0.6	chr16	30586321	30586483	(59751862)	+	AluSc	SINE/Alu	133	294	(15)	1458401
1619	16.4	7.4	0.0	chr16	30814766	30815052	(59523293)	C	AluSg	SINE/Alu	(0)	310	1	1458926
656	21.4	5.1	1.9	chr16	30833907	30834079	(59504266)	+	MIRb	SINE/MIR	84	268	(0)	1458978
2516	6.9	0.0	0.0	chr16	31095050	31095354	(59242991)	+	AluSx	SINE/Alu	1	305	(7)	1459584
20	8.9	2.8	0.0	chr16	31202044	31202079	(59136266)	+	(TGCCC)n	Simple_repeat	1	37	(0)	1459827
14	13.9	2.9	2.9	chr16	31202707	31202740	(59135605)	+	(GCC)n	Simple_repeat	1	35	(0)	1459828
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
2157	18.3	7.9	16.4	chr16	48582192	48582793	(41755552)	+	MER44B	DNA/TcMar-Tigger	5	550	(0)	1469046
1760	19.1	3.2	0.7	chr16	48582812	48583115	(41755230)	+	AluJr	SINE/Alu	1	312	(0)	1469047
13	9.8	0.0	0.0	chr16	54933377	54933398	(35404947)	+	(CGC)n	Simple_repeat	1	22	(0)	1480398
13	25.0	0.0	0.0	chr16	54933538	54933585	(35404760)	+	(CGTCGC)n	Simple_repeat	1	48	(0)	1480399
23289	7.1	2.5	0.9	chr16	68107730	68109997	(22228348)	C	L1PA10	LINE/L1	(704)	7459	5187	1502952
21	30.9	0.0	4.1	chr16	68235965	68235983	(22102362)	+	G-rich	Low_complexity	1	42	(56)	1503208
21	20.6	3.6	0.0	chr16	68235984	68236039	(22102306)	+	(GCG)n	Simple_repeat	1	58	(0)	1503209
21	30.9	0.0	4.1	chr16	68236040	68236062	(22102283)	+	G-rich	Low_complexity	43	98	(0)	1503208
2044	11.6	2.1	0.7	chr16	70054554	70054838	(20283507)	C	AluSx1	SINE/Alu	(23)	289	1	1507138
2480	4.3	0.0	0.0	chr16	70294073	70294380	(20043965)	C	AluY	SINE/Alu	(0)	311	1	1507645
413	21.9	7.9	9.6	chr16	70294381	70294451	(20043894)	C	MER5A1	DNA/hAT-Charlie	(90)	76	2	1507644
329	27.4	10.2	0.0	chr16	70294545	70294650	(20043695)	C	L2c	LINE/L2	(8)	3379	3262	1507646
1250	9.4	9.1	5.7	chr16	70295288	70295499	(20042846)	C	AluJr	SINE/Alu	(6)	306	87	1507647
2594	7.7	0.0	0.0	chr16	71910325	71910635	(18427710)	+	AluYm1	SINE/Alu	1	311	(0)	1510624
529	14.9	3.3	0.0	chr16	71910638	71910724	(18427621)	+	Tigger7	DNA/TcMar-Tigger	2402	2491	(0)	1510625
2079	8.7	4.9	0.7	chr16	73014519	73014811	(17323534)	C	AluSc5	SINE/Alu	(0)	309	1	1512289
2111	14.8	0.3	0.0	chr16	73015041	73015345	(17323000)	C	AluJb	SINE/Alu	(6)	306	1	1512290
2045	13.8	2.7	0.0	chr16	74486915	74487203	(15851142)	C	AluSz	SINE/Alu	(13)	299	3	1514785
303	30.0	16.4	3.7	chr16	75336145	75336494	(15001851)	C	L2b	LINE/L2	(6)	3369	2967	1516565
480	25.5	9.1	2.0	chr16	75336518	75336761	(15001584)	C	L1ME4b	LINE/L1	(172)	720	458	1516563
2688	0.7	0.0	0.0	chr16	84140822	84141105	(6197240)	+	AluYd8	SINE/Alu	1	284	(15)	1532211
907	28.1	7.9	5.6	chr16	84141106	84141289	(6197056)	C	L1ME3D	LINE/L1	(213)	5960	5772	1532210
207	33.6	8.5	0.8	chr16	85208067	85208186	(5130159)	+	MIR1_Amn	SINE/MIR	6	135	(95)	1534390
12	15.7	2.6	5.0	chr16	85208463	85208501	(5129844)	+	(CCTGACT)n	Simple_repeat	1	40	(0)	1534391
528	19.1	8.1	5.8	chr16	85208573	85208728	(5129617)	C	MER58C	DNA/hAT-Charlie	(0)	215	56	1534392
669	22.4	5.8	0.0	chr16	85209164	85209324	(5129021)	C	MIR	SINE/MIR	(24)	238	68	1534393
2214	13.1	0.0	0.0	chr16	85263568	85263872	(5074473)	C	AluSx	SINE/Alu	(7)	305	1	1534521
183	34.7	4.5	6.2	chr16	85263941	85264100	(5074245)	C	L2b	LINE/L2	(165)	3210	3054	1534522
19	14.2	4.1	2.0	chr16	86513509	86513557	(3824788)	+	(TTTTATT)n	Simple_repeat	1	51	(0)	1536788
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
1170	16.9	14.7	0.0	chr16	87384639	87384881	(2953464)	+	AluJr	SINE/Alu	20	304	(8)	1538341
15	21.1	0.0	2.9	chr16	87855448	87855482	(2482863)	+	(CA)n	Simple_repeat	1	35	(0)	1539176
729	10.7	11.2	0.9	chr16	88248431	88248542	(2089803)	+	FLAM_C	SINE/Alu	2	126	(17)	1539732
58	19.9	3.0	3.0	chr16	88889267	88889430	(1448915)	+	G-rich	Low_complexity	1	169	(0)	1540557
312	28.4	13.2	2.3	chr16	88889499	88889649	(1448696)	+	MIRb	SINE/MIR	13	181	(87)	1540558
373	16.1	3.1	0.0	chr16	88890152	88890213	(1448132)	+	FAM	SINE/Alu	21	84	(101)	1540559
353	27.6	11.4	0.3	chr16	88890244	88890390	(1447955)	C	MIR	SINE/MIR	(81)	187	16	1540560
15	15.3	0.0	0.0	chr16	89137068	89137096	(1201249)	+	(GCA)n	Simple_repeat	1	29	(0)	1540832
2385	15.8	13.0	0.1	chr16	89257256	89257874	(1080471)	C	LTR1A2	LTR/ERV1	(101)	736	1	1541010
622	24.4	13.3	0.6	chr16	89390424	89390737	(947608)	+	L1MEc	LINE/L1	1237	1596	(4804)	1541186
585	23.3	0.8	0.0	chr16	89422188	89422307	(916038)	+	AluJr	SINE/Alu	157	277	(35)	1541232
675	26.8	3.2	8.0	chr16	89518626	89518974	(819371)	+	L1MD1	LINE/L1	5842	6172	(70)	1541414
2300	10.0	0.0	0.7	chr16	89518975	89519283	(819062)	C	AluSg	SINE/Alu	(3)	307	1	1541415
13	15.9	0.0	0.0	chr16	89575184	89575211	(763134)	+	(CCCCG)n	Simple_repeat	1	28	(0)	1541494
208	17.0	7.0	1.9	chr16	89575299	89575352	(762993)	+	L2b	LINE/L2	3309	3365	(10)	1541495
328	5.7	1.2	3.4	chr17	113094	113583	(83143858)	+	(ACCCTA)n	Simple_repeat	1	496	(0)	1544650
320	26.0	14.2	0.0	chr17	198130	198256	(83059185)	C	MIR	SINE/MIR	(81)	181	34	1544776
294	26.8	0.0	1.2	chr17	198749	198831	(83058610)	+	Charlie18a	DNA/hAT-Charlie	53	134	(208)	1544777
216	28.2	4.1	0.0	chr17	307517	307587	(82949854)	+	L2c	LINE/L2	3279	3352	(35)	1544962
11	20.9	9.1	3.6	chr17	509339	509415	(82748026)	+	(TCACTAG)n	Simple_repeat	1	84	(0)	1545288
13	20.5	5.8	1.8	chr17	509563	509614	(82747827)	+	(CTCACTA)n	Simple_repeat	1	55	(0)	1545289
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
335	15.7	0.0	0.0	chr17	618323	618372	(82639069)	C	AluSx3	SINE/Alu	(134)	177	128	1545457
376	11.8	0.0	0.0	chr17	618372	618422	(82639019)	C	AluSx3	SINE/Alu	(133)	178	128	1545458
352	13.7	0.0	0.0	chr17	618422	618472	(82638969)	C	AluSx3	SINE/Alu	(133)	178	128	1545459
355	18.5	5.5	0.2	chr17	618472	618622	(82638819)	C	AluJb	SINE/Alu	(123)	179	2	1545460
371	15.8	2.0	4.5	chr17	619642	619992	(82637449)	C	AluJb	SINE/Alu	(123)	179	2	1545482
240	27.4	1.7	14.6	chr17	737627	737763	(82519678)	+	MIRb	SINE/MIR	46	164	(104)	1545719
182	28.1	0.0	4.5	chr17	737723	737789	(82519652)	+	UCON80_AMi	Unknown	95	158	(64)	1545720
2440	8.0	0.7	0.0	chr17	738097	738395	(82519046)	C	AluSx1	SINE/Alu	(11)	301	1	1545721
381	34.5	6.7	7.8	chr17	816439	816784	(82440657)	+	L2b	LINE/L2	3034	3375	(0)	1545829
2451	7.0	0.3	0.3	chr17	1204163	1204474	(82052967)	+	AluSx	SINE/Alu	1	312	(0)	1546557
945	18.0	0.9	4.5	chr17	1204515	1204735	(82052706)	+	Tigger3a	DNA/TcMar-Tigger	38	250	(98)	1546558
326	20.0	5.3	7.2	chr17	1204805	1204876	(82052565)	+	Tigger3c	DNA/TcMar-Tigger	499	572	(30)	1546559
2014	11.9	0.7	0.0	chr17	1204877	1205199	(82052242)	C	AluSx	SINE/Alu	(0)	312	3	1546560
2267	11.0	1.0	0.0	chr17	1404063	1404362	(81853079)	C	AluSx	SINE/Alu	(9)	303	1	1547039
2289	11.6	0.0	0.0	chr17	1404600	1404901	(81852540)	+	AluSg	SINE/Alu	1	302	(8)	1547040
334	24.4	0.0	0.0	chr17	1468947	1469024	(81788417)	C	MER117	DNA/hAT-Charlie	(117)	80	3	1547203
2486	7.2	0.0	0.0	chr17	1486512	1486815	(81770626)	C	AluSx	SINE/Alu	(8)	304	1	1547233
13	11.2	3.3	0.0	chr17	1486816	1486828	(81770613)	+	(CCTC)n	Simple_repeat	2	14	(0)	1547234
353	27.2	8.8	0.8	chr17	1487018	1487143	(81770298)	+	MIRb	SINE/MIR	80	216	(52)	1547235
967	7.1	4.5	0.0	chr17	1568814	1568939	(81688502)	C	AluYm1	SINE/Alu	(178)	133	2	1547376
663	7.5	0.0	0.0	chr17	1568940	1569019	(81688422)	C	AluSx	SINE/Alu	(176)	136	57	1547377
271	26.6	3.0	0.0	chr17	1569268	1569331	(81688110)	C	L2a	LINE/L2	(2)	3424	3359	1547378
852	16.5	0.0	0.8	chr17	1602174	1602306	(81655135)	C	AluJr4	SINE/Alu	(180)	132	1	1547442
13	28.2	2.0	0.0	chr17	1977606	1977656	(81279785)	+	G-rich	Low_complexity	1	52	(0)	1548211
85	22.2	2.7	1.3	chr17	1977873	1978097	(81279344)	+	(CGCATCC)n	Simple_repeat	1	231	(0)	1548212
2188	16.1	2.4	6.3	chr17	2502781	2503258	(80754183)	+	L1M3	LINE/L1	5343	5801	(379)	1549261
342	26.8	10.5	6.4	chr17	2503312	2503530	(80753911)	+	L1MB7	LINE/L1	5642	5870	(314)	1549262
415	22.8	13.8	7.0	chr17	2503532	2503930	(80753511)	+	L1MB7	LINE/L1	5588	5867	(317)	1549263
2313	15.1	2.1	1.9	chr17	2503972	2504404	(80753037)	+	L1MB4	LINE/L1	5746	6179	(1)	1549264
573	20.6	2.8	2.1	chr17	3707145	3707288	(79550153)	+	L1ME2z	LINE/L1	6299	6443	(1)	1551553
2480	8.0	0.0	0.0	chr17	3787109	3787410	(79470031)	C	AluSx	SINE/Alu	(9)	303	2	1551728
3000	21.8	5.5	3.9	chr17	3787411	3787438	(79470003)	+	L1M5	LINE/L1	3980	4004	(2142)	1551720
628	20.7	0.8	0.0	chr17	3787442	3787557	(79469884)	C	AluJr	SINE/Alu	(195)	117	1	1551729
517	23.1	3.7	0.8	chr17	3787558	3787683	(79469758)	C	L1M5	LINE/L1	(467)	5706	5576	1551730
2297	10.9	0.0	0.3	chr17	3787684	3787986	(79469455)	C	AluSx1	SINE/Alu	(8)	304	3	1551731
616	20.6	14.1	120.8	chr17	3787987	3788247	(79469194)	C	L1M5	LINE/L1	(598)	5575	5140	1551730
1967	16.8	0.0	0.0	chr17	5040168	5040464	(78216977)	C	AluJr	SINE/Alu	(6)	306	10	1554276
2529	5.8	0.0	0.0	chr17	5040800	5041094	(78216347)	C	AluY	SINE/Alu	(16)	295	1	1554277
223	28.8	5.2	2.7	chr17	7173250	7173324	(76084117)	C	MIR	SINE/MIR	(137)	125	49	1558388
697	26.4	3.0	0.8	chr17	7174610	7176778	(76080663)	+	(CA)n	Simple_repeat	1	2233	(0)	1558389
17	30.5	0.0	1.5	chr17	7261654	7261719	(75995722)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1558513
16	18.4	7.9	1.5	chr17	7262511	7262573	(75994868)	+	G-rich	Low_complexity	1	68	(0)	1558514
12	25.6	2.1	2.0	chr17	7929447	7929494	(75327947)	+	G-rich	Low_complexity	1	49	(0)	1559761
56	1.8	1.7	0.0	chr17	8888003	8888060	(74369381)	+	(AAT)n	Simple_repeat	1	59	(0)	1561654
1680	19.1	2.6	0.3	chr17	9380255	9380553	(73876888)	C	AluJr	SINE/Alu	(6)	306	1	1562594
230	31.1	0.0	10.2	chr17	9380554	9380578	(73876863)	+	L1ME4a	LINE/L1	6076	6100	(24)	1562591
1705	15.5	6.9	6.9	chr17	9380579	9380709	(73876732)	+	Tigger3a	DNA/TcMar-Tigger	2	127	(221)	1562595
2007	11.8	2.3	3.0	chr17	9380710	9381014	(73876427)	C	AluSz	SINE/Alu	(9)	303	1	1562596
1705	15.5	6.9	6.9	chr17	9381015	9381228	(73876213)	+	Tigger3a	DNA/TcMar-Tigger	128	347	(1)	1562595
195	29.9	3.6	8.2	chr17	15972603	15972748	(67284693)	+	L2c	LINE/L2	3216	3354	(33)	1573998
1534	13.9	0.0	3.4	chr17	15972749	15972985	(67284456)	C	AluJb	SINE/Alu	(8)	304	76	1573999
885	18.5	19.9	0.5	chr17	16384560	16384950	(66872491)	+	MER21A	LTR/ERVL	20	494	(374)	1574862
18	12.4	2.9	0.0	chr17	17495259	17495293	(65762148)	+	(CGC)n	Simple_repeat	1	36	(0)	1576769
31	13.7	0.0	8.2	chr17	17496276	17496404	(65761037)	+	G-rich	Low_complexity	1	118	(0)	1576770
15	26.4	4.8	0.0	chr17	17496441	17496503	(65760938)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1576771
12	4.8	4.5	0.0	chr17	17810015	17810036	(65447405)	+	(GCCC)n	Simple_repeat	1	23	(0)	1577390
328	26.1	0.8	7.0	chr17	19523663	19523790	(63733651)	+	LTR85c	LTR/Gypsy?	697	816	(7)	1580778
1918	16.9	0.7	0.0	chr17	19523954	19524255	(63733186)	+	AluJb	SINE/Alu	1	304	(8)	1580779
2140	12.9	1.3	0.3	chr17	19524278	19524579	(63732862)	+	AluSz	SINE/Alu	1	305	(7)	1580780
13	17.7	5.3	0.0	chr17	19868095	19868132	(63389309)	+	G-rich	Low_complexity	1	40	(0)	1581431
596	26.2	1.2	5.2	chr17	20134061	20134310	(63123131)	C	L1MC4	LINE/L1	(1342)	6700	6461	1582007
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
2281	7.9	2.0	0.0	chr17	29254553	29254844	(54002597)	C	AluSp	SINE/Alu	(15)	298	1	1590223
1952	13.2	2.0	0.3	chr17	29254857	29255144	(54002297)	C	AluJo	SINE/Alu	(16)	296	4	1590224
185	32.5	3.5	3.5	chr17	29642971	29643056	(53614385)	+	MamRTE1	LINE/RTE-BovB	1422	1507	(2305)	1591040
2298	8.5	0.0	0.7	chr17	30913160	30913454	(52343987)	C	AluSg4	SINE/Alu	(17)	293	1	1593584
2309	11.4	0.0	0.0	chr17	30913509	30913815	(52343626)	+	AluSx	SINE/Alu	1	307	(5)	1593585
11	16.7	5.9	0.0	chr17	31917209	31917242	(51340199)	+	(GCGGCC)n	Simple_repeat	1	36	(0)	1595633
1485	21.6	11.4	7.8	chr17	31917822	31917918	(51339523)	C	HAL1	LINE/L1	(276)	2231	2122	1595634
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
1127	15.4	0.0	1.7	chr17	35150924	35151095	(48106346)	C	AluSx	SINE/Alu	(23)	289	121	1601814
1273	1.9	0.0	1.9	chr17	35151096	35151256	(48106185)	C	LSU-rRNA_Hsa	rRNA	(4877)	158	1	1601815
675	3.2	0.0	3.1	chr17	35151256	35151353	(48106088)	C	LSU-rRNA_Hsa	rRNA	(4821)	214	120	1601816
941	10.5	0.8	0.0	chr17	35151354	35151477	(48105964)	C	AluSx	SINE/Alu	(175)	137	13	1601814
260	29.1	17.4	3.0	chr17	35151497	35151670	(48105771)	+	MIR3	SINE/MIR	3	202	(6)	1601817
16	18.9	0.0	0.0	chr17	36943187	36943216	(46314225)	+	A-rich	Low_complexity	1	30	(0)	1604973
380	33.5	14.1	8.1	chr17	36949771	36950189	(46307252)	+	L3	LINE/CR1	3643	4090	(9)	1604978
1645	7.4	0.5	0.0	chr17	36950509	36950711	(46306730)	C	AluSp	SINE/Alu	(22)	291	88	1604979
1357	7.1	0.9	15.4	chr17	38840821	38841073	(44416368)	+	AluSx	SINE/Alu	96	311	(1)	1608700
641	2.7	0.0	0.0	chr17	39153733	39153805	(44103636)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609432
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
305	30.7	10.5	4.8	chr17	42547798	42547985	(40709456)	C	MIRb	SINE/MIR	(25)	243	44	1615866
20	28.0	0.0	1.5	chr17	42548091	42548157	(40709284)	+	G-rich	Low_complexity	1	67	(0)	1615867
29	11.4	0.0	0.0	chr17	42548615	42548662	(40708779)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	1615868
2467	6.6	0.0	0.7	chr17	42684644	42684947	(40572494)	+	AluSg7	SINE/Alu	1	302	(7)	1616151
428	32.5	6.5	11.2	chr17	43231681	43232037	(40025404)	+	L2c	LINE/L2	3048	3386	(1)	1617359
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
2299	10.2	0.0	0.6	chr17	43322194	43322506	(39934935)	+	AluSc8	SINE/Alu	1	311	(0)	1617603
2143	9.5	0.3	2.0	chr17	43322518	43322823	(39934618)	+	AluSp	SINE/Alu	9	309	(4)	1617604
554	23.0	9.5	6.4	chr17	43646517	43646693	(39610748)	+	MIR	SINE/MIR	42	233	(35)	1618316
1862	16.8	1.7	0.3	chr17	46132666	46132956	(37124485)	+	AluJb	SINE/Alu	1	295	(17)	1623432
456	32.7	8.3	4.3	chr17	46133005	46133234	(37124207)	C	MIRb	SINE/MIR	(0)	268	29	1623433
2265	11.6	0.0	2.2	chr17	47100904	47101223	(36156218)	+	AluSq2	SINE/Alu	1	313	(0)	1625336
2086	13.0	0.0	2.3	chr17	47101232	47101370	(36156071)	+	AluSz	SINE/Alu	1	135	(177)	1625337
1923	15.4	1.0	0.0	chr17	47101371	47101669	(36155772)	+	AluSz	SINE/Alu	3	304	(8)	1625338
685	22.8	32.7	2.5	chr17	47423129	47423403	(35834038)	+	L1MC4	LINE/L1	7685	8042	(0)	1625944
15	13.7	3.1	0.0	chr17	48725254	48725285	(34532156)	+	(CCT)n	Simple_repeat	1	33	(0)	1628365
20	3.5	3.3	0.0	chr17	49003778	49003807	(34253634)	+	(GGGA)n	Simple_repeat	1	31	(0)	1629013
17	4.5	0.0	4.0	chr17	49003973	49003997	(34253444)	+	(AG)n	Simple_repeat	1	25	(0)	1629014
12	28.2	1.7	3.3	chr17	49004032	49004090	(34253351)	+	(CGCCC)n	Simple_repeat	1	60	(0)	1629015
2120	13.5	1.6	0.0	chr17	55252941	55253243	(28004198)	C	AluJb	SINE/Alu	(4)	308	1	1639323
1559	21.4	7.1	5.4	chr17	55253403	55253846	(28003595)	+	MLT1C	LTR/ERVL-MaLR	11	462	(5)	1639324
56	29.0	7.1	0.0	chr17	56743745	56744039	(26513402)	+	(GGACAC)n	Simple_repeat	1	316	(0)	1641876
300	21.1	5.3	0.0	chr17	58008327	58008397	(25249044)	C	MER102b	DNA/hAT-Charlie	(183)	158	84	1644250
2116	7.7	3.7	0.3	chr17	58008407	58008692	(25248749)	+	AluSx1	SINE/Alu	1	296	(16)	1644251
13	18.5	0.0	8.0	chr17	58488067	58488116	(24769325)	+	(CGGCCC)n	Simple_repeat	1	50	(0)	1645087
2300	9.5	0.0	1.3	chr17	59098902	59099206	(24158235)	+	AluSc	SINE/Alu	1	301	(8)	1646423
740	15.0	3.4	8.0	chr17	59099207	59099228	(24158213)	+	L1MB4	LINE/L1	5764	5785	(395)	1646419
484	17.3	0.0	0.0	chr17	59099229	59099309	(24158132)	+	Tigger3c	DNA/TcMar-Tigger	2	82	(520)	1646424
459	9.1	0.0	0.0	chr17	59099308	59099384	(24158057)	+	Tigger3c	DNA/TcMar-Tigger	295	371	(231)	1646425
278	30.4	13.6	2.9	chr17	60139190	60139399	(23118042)	+	MIRc	SINE/MIR	1	236	(32)	1648656
2071	13.8	2.6	0.3	chr17	60140531	60140835	(23116606)	+	AluJr	SINE/Alu	1	312	(0)	1648657
2144	10.8	0.0	0.7	chr17	60503009	60503295	(22754146)	C	AluSc	SINE/Alu	(9)	300	16	1649384
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
272	24.5	6.2	11.4	chr17	60526470	60526627	(22730814)	C	Charlie4z	DNA/hAT-Charlie	(24)	143	4	1649442
5592	13.6	6.9	7.6	chr17	62595348	62595676	(20661765)	C	Tigger3b	DNA/TcMar-Tigger	(946)	285	1	1653327
1959	12.1	0.7	0.7	chr17	64920226	64920506	(18336935)	+	AluSz6	SINE/Alu	12	292	(20)	1657595
1544	12.9	0.0	0.5	chr17	64920550	64920766	(18336675)	C	AluSz	SINE/Alu	(96)	216	1	1657596
1254	18.5	14.0	0.7	chr17	64920771	64921042	(18336399)	C	MER21B	LTR/ERVL	(554)	314	1	1657597
299	23.4	5.5	9.3	chr17	64921116	64921266	(18336175)	C	MER20B	DNA/hAT-Charlie	(638)	145	1	1657598
1742	19.2	8.0	0.0	chr17	72354537	72354571	(10902870)	C	MLT2C2	LTR/ERVL	(0)	464	430	1670240
984	25.7	8.3	14.8	chr17	73151017	73151441	(10106000)	C	MLT1F	LTR/ERVL-MaLR	(149)	399	1	1671749
1759	24.2	8.6	7.0	chr17	73151443	73151777	(10105664)	+	HAL1	LINE/L1	1678	2031	(476)	1671747
591	25.2	5.3	5.3	chr17	75505931	75506139	(7751302)	C	MIRb	SINE/MIR	(21)	247	39	1676270
13	11.4	0.0	6.1	chr17	75775511	75775543	(7481898)	+	(TCTTCC)n	Simple_repeat	1	33	(0)	1676747
2400	8.6	0.0	0.0	chr17	76073864	76074166	(7183275)	+	AluSx1	SINE/Alu	1	303	(9)	1677343
1075	11.1	0.0	0.0	chr17	76074168	76074311	(7183130)	+	AluSx1	SINE/Alu	135	278	(34)	1677344
18	0.0	0.0	0.0	chr17	76434775	76434794	(6822647)	+	(T)n	Simple_repeat	1	20	(0)	1678014
12	9.8	0.0	0.0	chr17	76434795	76434816	(6822625)	+	(AAAC)n	Simple_repeat	1	22	(0)	1678015
242	28.9	0.0	0.0	chr17	76435134	76435185	(6822256)	C	MIRb	SINE/MIR	(183)	85	34	1678016
311	31.0	9.8	0.8	chr17	76435263	76435392	(6822049)	+	L1ME4b	LINE/L1	739	881	(11)	1678017
14	23.8	0.0	7.9	chr17	76585021	76585083	(6672358)	+	GA-rich	Low_complexity	1	63	(0)	1678329
13	14.8	5.1	2.4	chr17	76585150	76585188	(6672253)	+	G-rich	Low_complexity	1	41	(0)	1678330
299	20.5	4.3	3.3	chr17	77103710	77103800	(6153641)	+	MER92B	LTR/ERV1	545	636	(0)	1679454
200	30.2	9.3	0.0	chr17	77103911	77104036	(6153405)	+	L2b	LINE/L2	3025	3163	(212)	1679455
2297	7.0	0.7	1.9	chr17	77104107	77104420	(6153021)	C	AluSg4	SINE/Alu	(0)	310	1	1679456
2260	12.1	0.7	0.0	chr17	77119028	77119325	(6138116)	+	AluSx	SINE/Alu	1	300	(12)	1679487
28	12.8	0.0	0.0	chr17	77802348	77802390	(5455051)	+	(CA)n	Simple_repeat	1	43	(0)	1680666
18	25.3	0.0	0.0	chr17	79833500	79833541	(3423900)	+	(TA)n	Simple_repeat	1	42	(0)	1684004
22	11.9	0.0	0.0	chr17	79834113	79834149	(3423292)	+	(GCC)n	Simple_repeat	1	37	(0)	1684005
13	26.4	0.0	3.8	chr17	79834263	79834315	(3423126)	+	(GGCGGCT)n	Simple_repeat	1	53	(0)	1684006
36	0.0	0.0	0.0	chr17	79834442	79834474	(3422967)	+	(GTG)n	Simple_repeat	1	33	(0)	1684007
19	17.3	5.8	0.0	chr17	79834476	79834527	(3422914)	+	G-rich	Low_complexity	1	55	(0)	1684008
361	15.8	6.9	1.8	chr17	80024286	80025222	(3232219)	+	(CA)n	Simple_repeat	1	1002	(0)	1684319
190	36.9	0.0	0.0	chr17	80137695	80137759	(3119682)	C	MIRc	SINE/MIR	(62)	206	142	1684511
320	29.0	2.9	0.0	chr17	80137828	80137927	(3119514)	+	MER5B	DNA/hAT-Charlie	6	108	(70)	1684512
336	21.4	1.4	0.0	chr17	80137940	80138009	(3119432)	+	MER58A	DNA/hAT-Charlie	51	121	(103)	1684513
11	28.0	0.0	0.0	chr17	80617646	80617684	(2639757)	+	(TACTTT)n	Simple_repeat	1	39	(0)	1685324
2131	11.7	0.0	2.0	chr17	80617988	80618286	(2639155)	C	AluSx	SINE/Alu	(19)	293	1	1685325
13	8.8	11.1	0.0	chr17	81400579	81400614	(1856827)	+	(GCGCGG)n	Simple_repeat	1	40	(0)	1686232
13	13.2	0.0	0.0	chr17	81648363	81648387	(1609054)	+	(CGC)n	Simple_repeat	1	25	(0)	1686573
12	15.7	2.6	5.0	chr17	81648548	81648586	(1608855)	+	(ACCCCC)n	Simple_repeat	1	40	(0)	1686574
1184	22.7	5.1	5.6	chr17	81740488	81740608	(1516833)	C	MLT1B	LTR/ERVL-MaLR	(243)	147	22	1686726
14	12.2	0.0	9.3	chr17	81741007	81741049	(1516392)	+	(CCCT)n	Simple_repeat	1	43	(0)	1686731
659	22.5	4.4	1.7	chr17	81792544	81793663	(1463778)	+	(CA)n	Simple_repeat	1	1175	(0)	1686733
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
659	22.5	4.4	1.7	chr17	81793921	81794546	(1462895)	+	(CA)n	Simple_repeat	1	626	(0)	1686735
760	31.2	6.7	0.3	chr17	81990742	81991062	(1266379)	C	MER54A	LTR/ERVL	(484)	417	75	1687027
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
231	23.2	0.0	1.8	chr17	82066362	82066418	(1191023)	+	MER34A	LTR/ERV1	46	101	(470)	1687091
2439	10.8	4.6	8.4	chr17	82066493	82066656	(1190785)	+	MER4A1	LTR/ERV1	18	159	(313)	1687092
1796	8.9	2.1	0.0	chr17	82066657	82066892	(1190549)	+	AluSx	SINE/Alu	66	306	(6)	1687093
19	9.2	2.9	0.0	chr17	82079080	82079114	(1178327)	+	(GGGGT)n	Simple_repeat	1	36	(0)	1687123
1119	21.3	0.5	0.3	chr17	82147079	82149352	(1108089)	+	(TGGA)n	Simple_repeat	1	2286	(0)	1687231
1801	13.1	1.5	0.4	chr17	82225017	82225276	(1032165)	+	AluSg4	SINE/Alu	36	298	(12)	1687364
2140	11.0	2.1	0.0	chr17	82341638	82341918	(915523)	+	AluSz	SINE/Alu	1	287	(25)	1687510
1724	18.8	3.9	0.3	chr17	82341920	82342309	(915132)	+	LTR38B	LTR/ERV1	208	611	(0)	1687511
527	29.8	6.6	1.7	chr17	82342380	82342611	(914830)	+	MER83A-int	LTR/ERV1	121	364	(1422)	1687511
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
2508	5.7	0.3	0.0	chr17	82401145	82401441	(856000)	C	AluY	SINE/Alu	(13)	298	1	1687576
2291	12.8	0.0	0.3	chr17	82472201	82472504	(784937)	+	AluSx1	SINE/Alu	1	303	(9)	1687694
709	16.1	0.8	3.6	chr17	82546630	82546766	(710675)	C	FLAM_C	SINE/Alu	(10)	133	1	1687860
2123	11.9	0.6	0.3	chr17	82546795	82547106	(710335)	+	AluSq2	SINE/Alu	1	313	(0)	1687861
1116	10.1	17.2	0.0	chr17	82547292	82547479	(709962)	C	MER30	DNA/hAT-Charlie	(3)	227	1	1687862
827	12.7	0.0	4.5	chr17	82650529	82650662	(606779)	+	AluJr	SINE/Alu	176	303	(9)	1688032
296	19.1	13.0	2.1	chr17	82650671	82650766	(606675)	+	MLT1D	LTR/ERVL-MaLR	48	155	(350)	1688033
231	19.2	5.2	8.8	chr17	82650869	82650948	(606493)	+	MLT1D	LTR/ERVL-MaLR	289	365	(140)	1688033
1357	21.1	15.0	1.9	chr17	82651867	82652278	(605163)	+	MLT1D	LTR/ERVL-MaLR	1	476	(29)	1688039
13	16.4	0.0	5.3	chr17	82661135	82661172	(596269)	+	(CCACCAG)n	Simple_repeat	1	38	(0)	1688049
2393	8.4	0.0	0.0	chr17	82670535	82670831	(586610)	C	AluSg	SINE/Alu	(12)	298	2	1688061
442	25.1	1.8	7.9	chr17	82670981	82671157	(586284)	C	HAL1	LINE/L1	(127)	2380	2215	1688062
2237	8.1	3.1	0.0	chr17	82695884	82696167	(561274)	C	AluSp	SINE/Alu	(20)	293	1	1688106
1774	12.4	0.3	7.3	chr17	82715322	82715651	(541790)	C	AluSq2	SINE/Alu	(6)	307	1	1688134
744	22.6	8.5	0.0	chr17	82715902	82716105	(541336)	C	Ricksha_c	DNA/MULE-MuDR	(1142)	906	684	1688135
283	18.9	1.3	2.6	chr17	82716094	82716169	(541272)	C	Ricksha_c	DNA/MULE-MuDR	(1613)	435	361	1688135
2300	5.5	1.9	1.6	chr17	82734722	82735030	(522411)	+	AluY	SINE/Alu	1	310	(1)	1688166
20	22.4	3.1	1.5	chr17	82735524	82735587	(521854)	+	(CCGCC)n	Simple_repeat	1	66	(0)	1688167
584	22.3	8.3	3.5	chr17	82747788	82747959	(509482)	C	MLT1B	LTR/ERVL-MaLR	(209)	181	1	1688188
665	23.7	11.2	3.5	chr17	82747967	82748138	(509303)	C	L1MEc	LINE/L1	(3620)	2699	2502	1688189
265	22.9	1.4	1.4	chr17	82750126	82750196	(507245)	C	LTR37B	LTR/ERV1	(181)	287	217	1688193
61	24.2	1.3	10.3	chr17	82750769	82751153	(506288)	+	(CCCTTC)n	Simple_repeat	1	390	(0)	1688194
351	25.4	6.5	1.5	chr17	82856474	82856641	(400800)	+	MLT1A0	LTR/ERVL-MaLR	13	188	(220)	1688350
356	26.4	1.1	0.0	chr17	82856642	82856732	(400709)	C	L1MB5	LINE/L1	(466)	5714	5623	1688345
1342	20.5	1.9	1.0	chr17	82856970	82857492	(399949)	C	L1MB5	LINE/L1	(534)	5650	5121	1688345
1072	31.0	6.7	6.4	chr17	82886968	82887131	(370310)	C	L1ME1	LINE/L1	(35)	6324	6155	1688367
44	0.0	0.0	0.0	chr17	82887132	82887169	(370272)	+	(TG)n	Simple_repeat	1	38	(0)	1688370
1371	26.2	8.4	1.9	chr17	82887170	82888129	(369312)	C	L1ME1	LINE/L1	(205)	6154	5102	1688367
407	30.7	1.2	1.8	chr17	82902046	82902211	(355230)	C	L1ME1	LINE/L1	(3625)	2521	2357	1688381
406	25.7	2.2	4.2	chr17	82902278	82902419	(355022)	C	MER58C	DNA/hAT-Charlie	(68)	147	9	1688382
360	27.4	8.7	1.6	chr17	82949206	82949387	(308054)	+	L1ME4b	LINE/L1	351	546	(346)	1688417
289	21.3	1.3	6.2	chr17	82949705	82949784	(307657)	+	L1MC5	LINE/L1	8924	8999	(305)	1688418
540	13.7	3.3	0.0	chr17	82987013	82987135	(270306)	+	Ricksha_0	DNA/MULE-MuDR	24	160	(1021)	1688453
552	24.3	16.2	3.8	chr17	83008566	83008867	(248574)	+	MLT1G1	LTR/ERVL-MaLR	88	413	(182)	1688477
2082	13.8	0.3	0.0	chr17	83017341	83017637	(239804)	+	AluSz	SINE/Alu	1	298	(14)	1688485
1933	16.4	5.1	3.5	chr17	83017638	83017767	(239674)	+	L1MA4	LINE/L1	6141	6269	(31)	1688484
386	33.9	5.9	3.5	chr17	83018429	83018660	(238781)	C	MIRc	SINE/MIR	(29)	239	2	1688486
591	15.1	10.4	6.0	chr17	83060404	83060464	(196977)	C	LTR37A	LTR/ERV1	(1)	425	365	1688535
2175	16.3	5.4	3.6	chr17	83060465	83060830	(196611)	+	MSTA	LTR/ERVL-MaLR	1	389	(39)	1688536
2462	5.4	0.0	0.3	chr17	83060831	83061127	(196314)	+	AluY	SINE/Alu	1	296	(15)	1688537
2297	21.4	9.6	2.9	chr17	83065460	83066219	(191222)	C	MER21C	LTR/ERVL	(23)	915	10	1688543
1390	21.8	7.9	1.4	chr17	83246582	83247135	(10306)	C	L1MC	LINE/L1	(2239)	5546	4952	1688732
167	14.0	0.3	2.0	chr17	83247136	83247436	(10005)	+	(GTTAGG)n	Simple_repeat	1	302	(0)	1688733
540	3.0	2.1	1.6	chr18	10001	10631	(80362654)	+	(CCCTAA)n	Simple_repeat	1	644	(0)	1689081
2168	16.4	8.3	1.8	chr18	10632	11145	(80362140)	C	TAR1	Satellite/telo	(217)	1894	1344	1689082
36	4.9	0.0	0.0	chr18	98752	98793	(80274492)	+	(CCCTAA)n	Simple_repeat	1	42	(0)	1689188
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2161	9.4	2.0	0.0	chr18	713206	713493	(79659792)	+	AluSx	SINE/Alu	12	305	(7)	1690299
2413	6.7	0.3	0.0	chr18	713501	713799	(79659486)	+	AluSc8	SINE/Alu	11	310	(1)	1690300
2598	9.1	0.3	0.0	chr18	13698071	13698378	(66674907)	+	AluSx1	SINE/Alu	1	309	(3)	1709389
885	10.7	3.8	3.8	chr18	13698515	13698536	(66674749)	C	AluJr	SINE/Alu	(181)	131	114	1709390
2608	11.2	6.3	6.5	chr18	13698537	13698996	(66674289)	+	LTR46	LTR/ERV1	2	460	(0)	1709391
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
2113	10.7	2.6	0.7	chr18	21590669	21590966	(58782319)	+	AluSc	SINE/Alu	1	304	(5)	1712867
817	21.9	7.8	12.6	chr18	21591009	21591416	(58781869)	+	MLT1D	LTR/ERVL-MaLR	2	499	(6)	1712868
35833	7.4	1.1	0.5	chr18	26233679	26238550	(54134735)	C	HERV9-int	LTR/ERV1	(2877)	5559	547	1720587
26064	6.3	0.9	0.0	chr18	26238591	26244703	(54128582)	C	L1PA5	LINE/L1	(1)	6153	4	1720588
15	12.0	0.0	0.0	chr18	31042243	31042269	(49331016)	+	(ACC)n	Simple_repeat	1	27	(0)	1727132
13	22.6	0.0	4.4	chr18	31042994	31043038	(49330247)	+	(CCCCG)n	Simple_repeat	1	45	(0)	1727133
18	24.3	6.3	1.2	chr18	31685553	31685631	(48687654)	+	(CCG)n	Simple_repeat	1	84	(0)	1728041
404	27.2	8.9	2.6	chr18	31686315	31686503	(48686782)	+	MIRb	SINE/MIR	40	241	(27)	1728042
480	32.4	7.6	4.7	chr18	32570542	32570641	(47802644)	C	L1M5	LINE/L1	(1131)	5015	4919	1729568
4549	10.6	2.2	1.3	chr18	32570642	32571330	(47801955)	+	MER50B	LTR/ERV1	1	695	(2)	1729572
480	32.4	7.6	4.7	chr18	32571331	32572012	(47801273)	C	L1M5	LINE/L1	(1228)	4918	4209	1729568
2170	23.6	4.3	4.6	chr18	33442180	33442624	(46930661)	+	MLT1E3	LTR/ERVL-MaLR	1	460	(164)	1730737
2121	14.6	0.3	0.7	chr18	33442625	33442925	(46930360)	+	AluSz	SINE/Alu	1	300	(12)	1730738
16	11.7	0.0	0.0	chr18	35054682	35054710	(45318575)	+	(GTTT)n	Simple_repeat	1	29	(0)	1732793
1224	20.6	12.0	2.4	chr18	35055120	35055531	(45317754)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	11	1732794
22	24.6	3.2	0.0	chr18	35267705	35267766	(45105519)	+	(AT)n	Simple_repeat	1	64	(0)	1733077
232	20.7	1.7	4.9	chr18	36050900	36050951	(44322334)	C	Charlie1a	DNA/hAT-Charlie	(1183)	272	223	1734206
488	24.2	0.0	0.0	chr18	36050952	36051042	(44322243)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	346	1734207
370	19.3	12.9	0.0	chr18	36051044	36051131	(44322154)	C	Tigger2a	DNA/TcMar-Tigger	(333)	101	1	1734207
727	25.9	4.9	4.9	chr18	36051132	36051354	(44321931)	C	Charlie1a	DNA/hAT-Charlie	(1232)	223	1	1734208
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
735	21.9	1.3	0.3	chr18	78850862	78851031	(1522254)	+	L1ME3G	LINE/L1	5437	5573	(598)	1794914
227	6.7	0.0	0.0	chr18	78851045	78851074	(1522211)	+	L1M3	LINE/L1	5544	5573	(610)	1794915
227	6.7	0.0	0.0	chr18	78851227	78851256	(1522029)	+	L1M3	LINE/L1	5544	5573	(610)	1794915
227	6.7	0.0	0.0	chr18	78851331	78851360	(1521925)	+	L1M3	LINE/L1	5544	5573	(610)	1794915
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
246	23.1	0.0	0.0	chr18	79915932	79915983	(457302)	+	MER21A	LTR/ERVL	15	66	(865)	1795893
1616	21.4	14.7	7.5	chr18	79916325	79916935	(456350)	+	MER21A	LTR/ERVL	55	716	(215)	1795893
893	20.1	1.4	0.9	chr18	79923543	79923763	(449522)	+	L1MB7	LINE/L1	4942	5163	(983)	1795897
1851	15.7	4.0	0.3	chr18	79923766	79924052	(449233)	+	AluJo	SINE/Alu	1	298	(14)	1795898
1250	24.4	4.3	3.8	chr18	79924213	79924604	(448681)	+	L1MB7	LINE/L1	5769	6162	(22)	1795897
12	19.6	2.9	0.0	chr18	79943381	79943415	(429870)	+	(GCATCA)n	Simple_repeat	1	36	(0)	1795913
252	6.5	1.3	5.3	chr19	245537	246002	(58371614)	+	(TAACCC)n	Simple_repeat	1	472	(0)	1796617
5485	10.1	23.0	1.1	chr19	246007	247536	(58370080)	C	TAR1	Satellite/telo	(43)	1864	1	1796618
68	36.2	0.0	0.0	chr19	291432	291684	(58325932)	+	G-rich	Low_complexity	1	253	(0)	1796697
2356	6.6	0.3	0.0	chr19	569347	569635	(58047981)	+	AluSx3	SINE/Alu	1	290	(21)	1797169
3983	11.0	4.2	4.0	chr19	569636	570143	(58047473)	C	HERVIP10B3-int	LTR/ERV1	(5925)	1678	1175	1797168
2292	7.3	0.0	3.8	chr19	570144	570458	(58047158)	C	AluSg7	SINE/Alu	(6)	303	1	1797170
311	26.0	0.9	8.9	chr19	602099	602470	(58015146)	+	TAR1	Satellite/telo	1093	1434	(677)	1797209
2173	10.0	1.0	0.7	chr19	636699	636998	(57980618)	+	AluSx1	SINE/Alu	1	301	(11)	1797270
628	25.2	7.4	2.7	chr19	637054	637333	(57980283)	C	MLT1D	LTR/ERVL-MaLR	(21)	484	174	1797271
2577	6.8	0.0	0.0	chr19	654365	654672	(57962944)	+	AluSx1	SINE/Alu	5	312	(0)	1797298
307	32.3	2.0	0.0	chr19	667622	667720	(57949896)	C	MIR	SINE/MIR	(73)	189	89	1797328
1856	12.2	0.7	7.2	chr19	667942	668089	(57949527)	+	AluSz	SINE/Alu	1	134	(178)	1797329
917	9.8	0.0	1.6	chr19	673456	673577	(57944039)	C	AluSz	SINE/Alu	(179)	133	14	1797344
457	28.4	4.3	1.7	chr19	673629	673807	(57943809)	C	MLT1D	LTR/ERVL-MaLR	(320)	185	2	1797340
330	28.5	1.5	9.7	chr19	673882	674025	(57943591)	+	L2b	LINE/L2	3110	3241	(134)	1797345
226	25.0	9.7	2.3	chr19	688953	689038	(57928578)	C	L2a	LINE/L2	(0)	3387	3295	1797373
348	27.7	7.2	0.0	chr19	689323	689463	(57928153)	C	L2a	LINE/L2	(262)	3164	3013	1797373
260	27.8	10.0	3.8	chr19	689497	689627	(57927989)	C	L2a	LINE/L2	(477)	2942	2803	1797373
970	14.1	0.0	0.0	chr19	689637	689771	(57927845)	+	AluJb	SINE/Alu	1	135	(177)	1797374
2053	13.3	0.3	0.0	chr19	689773	690058	(57927558)	+	AluSx1	SINE/Alu	2	288	(24)	1797375
13	26.1	1.7	3.4	chr19	746816	746873	(57870743)	+	(CCGGCCC)n	Simple_repeat	1	59	(0)	1797512
343	28.8	6.7	1.4	chr19	794188	794328	(57823288)	+	MLT1D	LTR/ERVL-MaLR	8	156	(349)	1797631
2088	13.1	0.0	0.0	chr19	794347	794637	(57822979)	C	AluSg	SINE/Alu	(1)	309	19	1797632
210	31.7	7.8	3.4	chr19	794971	795117	(57822499)	C	L2	LINE/L2	(480)	2939	2786	1797634
17	15.4	2.1	4.2	chr19	812522	812568	(57805048)	+	(CCGCCCC)n	Simple_repeat	1	48	(0)	1797647
14	22.2	4.4	4.2	chr19	812680	812747	(57804869)	+	(CCCGGCG)n	Simple_repeat	1	71	(0)	1797648
2455	6.9	0.0	0.3	chr19	903769	904071	(57713545)	+	AluY	SINE/Alu	1	302	(9)	1797849
1352	14.2	19.5	0.0	chr19	904553	904792	(57712824)	+	AluJr	SINE/Alu	2	299	(13)	1797850
346	31.7	2.1	0.0	chr19	911546	911686	(57705930)	C	MIR1_Amn	SINE/MIR	(76)	186	41	1797873
19	24.6	2.8	2.7	chr19	1011502	1011572	(57606044)	+	G-rich	Low_complexity	1	73	(0)	1798072
14	15.7	0.0	5.1	chr19	1012014	1012052	(57605564)	+	(GCCCCC)n	Simple_repeat	1	39	(0)	1798073
213	28.2	4.5	5.6	chr19	1051599	1051688	(57565928)	C	L2c	LINE/L2	(212)	3175	3087	1798142
353	32.9	7.1	1.7	chr19	1051734	1051906	(57565710)	C	L2c	LINE/L2	(175)	3212	3030	1798143
316	10.7	1.6	2.9	chr19	1165574	1166251	(57451365)	+	(CCAGATC)n	Simple_repeat	1	689	(0)	1798308
2252	10.8	0.0	1.6	chr19	1199164	1199470	(57418146)	+	AluSx3	SINE/Alu	1	302	(9)	1798390
198	37.3	2.2	2.9	chr19	1199840	1199977	(57417639)	+	MIR3	SINE/MIR	33	169	(39)	1798391
2285	9.9	1.0	0.0	chr19	1299277	1299580	(57318036)	+	AluSc	SINE/Alu	1	307	(2)	1798517
1090	13.8	0.6	7.1	chr19	1299581	1299598	(57318018)	+	AluSx	SINE/Alu	297	312	(0)	1798515
38	0.0	0.0	0.0	chr19	1300242	1300276	(57317340)	+	(T)n	Simple_repeat	1	35	(0)	1798518
2341	6.8	0.0	1.0	chr19	1583824	1584117	(57033499)	C	AluSx	SINE/Alu	(14)	298	8	1799072
284	23.7	2.0	11.8	chr19	1584125	1584234	(57033382)	+	MER2B	DNA/TcMar-Tigger	238	336	(0)	1799073
1306	12.6	5.6	1.5	chr19	1584238	1584443	(57033173)	C	AluJo	SINE/Alu	(32)	280	66	1799074
2203	9.9	0.0	0.0	chr19	1624116	1624398	(56993218)	+	AluSc	SINE/Alu	1	283	(26)	1799160
14	18.8	0.0	0.0	chr19	1624400	1624430	(56993186)	+	(ACA)n	Simple_repeat	1	31	(0)	1799161
816	26.4	9.9	3.4	chr19	1624596	1624853	(56992763)	+	Tigger17	DNA/TcMar-Tigger	1	285	(2388)	1799162
1711	20.9	0.0	0.3	chr19	1624854	1625145	(56992471)	C	AluJr	SINE/Alu	(20)	292	2	1799163
181	27.7	8.8	2.9	chr19	1729661	1729831	(56887785)	+	L2a	LINE/L2	2998	3179	(196)	1799406
192	32.0	11.8	4.0	chr19	1729876	1729976	(56887640)	+	L2a	LINE/L2	3265	3374	(52)	1799406
233	32.0	5.4	4.9	chr19	1809994	1810158	(56807458)	C	MIR3	SINE/MIR	(29)	179	27	1799563
349	23.3	4.6	2.8	chr19	1830591	1830696	(56786920)	+	MLT1D	LTR/ERVL-MaLR	1	108	(397)	1799592
12	22.1	3.9	3.8	chr19	1978235	1978285	(56639331)	+	G-rich	Low_complexity	1	53	(0)	1799861
21	29.5	1.2	1.2	chr19	1978750	1978829	(56638787)	+	G-rich	Low_complexity	1	81	(0)	1799862
2500	7.4	0.3	0.3	chr19	1993714	1994025	(56623591)	+	AluSx1	SINE/Alu	1	312	(0)	1799888
14	14.7	0.0	7.0	chr19	2046325	2046367	(56571249)	+	(TCCCCGC)n	Simple_repeat	1	43	(0)	1800027
2305	8.6	2.9	0.3	chr19	2095740	2096043	(56521573)	C	AluSx	SINE/Alu	(0)	312	1	1800144
2380	8.1	0.3	0.0	chr19	2299724	2300021	(56317595)	C	AluY	SINE/Alu	(12)	299	1	1800497
2361	10.0	0.0	0.3	chr19	2300022	2300331	(56317285)	C	AluSx	SINE/Alu	(3)	309	1	1800498
294	36.1	2.9	1.5	chr19	2501729	2501863	(56115753)	+	MER70-int	LTR/ERVL	1663	1799	(3224)	1800951
990	25.7	1.4	2.2	chr19	2501967	2502147	(56115469)	C	L1MC2	LINE/L1	(195)	6149	5971	1800952
40	7.8	0.0	0.0	chr19	2514952	2515005	(56102611)	+	(GA)n	Simple_repeat	1	54	(0)	1800988
1562	25.9	6.0	2.6	chr19	2515168	2515425	(56102191)	+	L1MB5	LINE/L1	5653	5919	(232)	1800989
1436	20.9	8.4	2.1	chr19	2547249	2547669	(56069947)	C	MLT1D	LTR/ERVL-MaLR	(55)	450	1	1801068
2441	6.3	0.0	0.3	chr19	2684136	2684434	(55933182)	C	AluSc	SINE/Alu	(11)	298	1	1801432
899	25.8	0.8	0.0	chr19	2684440	2684705	(55932911)	+	L1MB3	LINE/L1	5705	5972	(211)	1801433
1133	6.7	0.0	0.0	chr19	2684707	2684841	(55932775)	+	AluSx	SINE/Alu	1	135	(177)	1801434
2108	12.9	0.3	0.0	chr19	2799045	2799331	(55818285)	+	AluJb	SINE/Alu	2	289	(23)	1801686
2485	7.1	0.0	0.3	chr19	2899498	2899805	(55717811)	+	AluSg	SINE/Alu	2	308	(2)	1801884
291	28.0	2.2	1.5	chr19	2899841	2899974	(55717642)	C	MER92A	LTR/ERV1	(216)	196	62	1801885
2682	2.9	0.7	0.3	chr19	2900006	2900314	(55717302)	+	AluY	SINE/Alu	1	310	(1)	1801886
2445	9.7	0.0	0.0	chr19	2910449	2910759	(55706857)	C	AluY	SINE/Alu	(0)	311	1	1801907
1025	8.4	0.0	0.0	chr19	2910763	2910893	(55706723)	C	AluY	SINE/Alu	(180)	131	1	1801908
756	13.2	5.1	1.2	chr19	2910896	2911064	(55706552)	C	L1MB7	LINE/L1	(4228)	2280	2105	1801903
1777	16.7	0.7	3.3	chr19	2911068	2911248	(55706368)	C	AluJr4	SINE/Alu	(15)	297	123	1801909
2391	9.7	0.0	0.3	chr19	2927490	2927798	(55689818)	+	AluSg	SINE/Alu	1	308	(2)	1801932
2509	5.1	0.0	1.9	chr19	3130852	3131166	(55486450)	+	AluY	SINE/Alu	3	311	(0)	1802455
28	18.4	0.0	0.0	chr19	3131437	3131486	(55486130)	+	A-rich	Low_complexity	1	50	(0)	1802456
283	26.6	1.1	3.1	chr19	3131511	3131607	(55486009)	+	L1ME2	LINE/L1	6017	6111	(68)	1802452
211	30.7	2.6	2.6	chr19	3178333	3178409	(55439207)	C	L2b	LINE/L2	(3)	3372	3296	1802575
218	27.5	9.5	2.9	chr19	3180167	3180312	(55437304)	+	MIR3	SINE/MIR	15	172	(96)	1802576
2264	8.6	0.3	5.8	chr19	3317832	3318158	(55299458)	C	AluSq2	SINE/Alu	(4)	309	1	1802914
2338	10.4	0.0	0.0	chr19	3318513	3318811	(55298805)	C	AluSx1	SINE/Alu	(13)	299	1	1802915
2027	13.4	0.3	1.3	chr19	3452954	3453252	(55164364)	+	AluJo	SINE/Alu	1	296	(16)	1803330
1744	17.4	5.8	0.3	chr19	4088649	4088822	(54528794)	C	AluJb	SINE/Alu	(1)	311	134	1804722
13	18.2	0.0	0.0	chr19	4493717	4493747	(54123869)	+	(CTCCGA)n	Simple_repeat	1	31	(0)	1805728
27	3.5	0.0	0.0	chr19	4493787	4493816	(54123800)	+	(TCC)n	Simple_repeat	1	30	(0)	1805729
258	32.0	0.0	0.0	chr19	4800540	4800617	(53816999)	+	L2b	LINE/L2	3297	3374	(1)	1806498
2130	10.4	0.7	4.2	chr19	4932223	4932367	(53685249)	C	AluSx	SINE/Alu	(173)	139	1	1806908
672	20.7	1.6	8.7	chr19	4932368	4932563	(53685053)	C	MLT1C	LTR/ERVL-MaLR	(285)	182	1	1806910
664	23.3	5.3	0.0	chr19	4996820	4996999	(53620617)	C	MER20	DNA/hAT-Charlie	(0)	219	30	1807056
408	24.2	6.2	0.0	chr19	4997047	4997166	(53620450)	C	MER20	DNA/hAT-Charlie	(91)	128	1	1807057
367	26.9	2.5	0.9	chr19	4997525	4997640	(53619976)	+	MIR	SINE/MIR	60	177	(85)	1807058
1252	20.3	0.0	0.4	chr19	5042853	5043094	(53574522)	C	Tigger4b	DNA/TcMar-Tigger	(111)	250	10	1807130
15	4.1	4.0	0.0	chr19	5336658	5336682	(53280934)	+	(TTTTG)n	Simple_repeat	1	26	(0)	1807704
2325	7.2	3.6	0.0	chr19	5792027	5792319	(52825297)	+	AluSx1	SINE/Alu	1	304	(8)	1808847
402	27.4	4.9	1.5	chr19	5792348	5792484	(52825132)	C	L2a	LINE/L2	(9)	3417	3276	1808848
606	21.2	5.6	9.7	chr19	5792487	5792738	(52824878)	C	MER8	DNA/TcMar-Tigger	(8)	328	1	1808849
3431	19.3	7.6	2.1	chr19	6253295	6253827	(52363789)	+	L1M4	LINE/L1	3443	3980	(2166)	1809755
1767	16.7	5.7	0.0	chr19	6455007	6455287	(52162329)	+	AluJr	SINE/Alu	1	298	(14)	1810288
2114	9.2	0.3	1.1	chr19	6455708	6456018	(52161598)	C	AluY	SINE/Alu	(0)	311	1	1810289
2411	10.4	0.0	0.0	chr19	7518783	7519090	(51098526)	+	AluSx1	SINE/Alu	1	308	(4)	1813132
190	25.0	0.0	0.0	chr19	7519225	7519264	(51098352)	+	X6A_LINE	LINE/CR1	537	576	(504)	1813133
1788	23.4	10.9	1.7	chr19	10188545	10189074	(48428542)	+	MLT1E2	LTR/ERVL-MaLR	12	596	(31)	1819098
1061	14.5	0.0	0.6	chr19	10308877	10309042	(48308574)	C	AluJr	SINE/Alu	(7)	305	141	1819423
1748	18.1	2.3	0.3	chr19	10429342	10429634	(48187982)	C	AluJo	SINE/Alu	(10)	302	4	1819720
14	15.7	5.5	5.2	chr19	10430936	10430990	(48186626)	+	(CCGCGCCG)n	Simple_repeat	1	58	(0)	1819721
275	34.1	5.7	2.3	chr19	10431109	10431279	(48186337)	+	MIRc	SINE/MIR	53	229	(39)	1819722
1261	10.9	0.0	5.2	chr19	10729186	10729378	(47888238)	+	AluSq	SINE/Alu	121	303	(10)	1820537
192	31.2	0.0	0.0	chr19	10729488	10729551	(47888065)	C	L2a	LINE/L2	(328)	3098	3035	1820531
277	30.5	10.1	0.7	chr19	10729645	10729796	(47887820)	C	L1ME3G	LINE/L1	(10)	914	747	1820538
1887	16.7	0.3	0.3	chr19	10729865	10730163	(47887453)	C	AluJo	SINE/Alu	(13)	299	1	1820539
2399	9.6	0.3	0.3	chr19	10731342	10731653	(47885963)	C	AluSz6	SINE/Alu	(0)	312	1	1820541
2203	12.5	0.3	0.0	chr19	10983431	10983733	(47633883)	C	AluSz	SINE/Alu	(8)	304	1	1821177
304	27.4	7.5	1.6	chr19	10983735	10983860	(47633756)	C	MER113	DNA/hAT-Charlie	(264)	257	124	1821176
17	29.4	1.4	2.7	chr19	10984185	10984258	(47633358)	+	(CCTGGC)n	Simple_repeat	1	75	(0)	1821178
318	24.0	6.8	5.9	chr19	11058981	11059082	(47558534)	C	SVA_A	Retroposon/SVA	(1181)	206	104	1821314
968	11.2	0.0	0.0	chr19	11059001	11059125	(47558491)	+	FLAM_C	SINE/Alu	9	133	(10)	1821315
2486	9.0	0.0	0.0	chr19	11208269	11208578	(47409038)	C	AluSg	SINE/Alu	(0)	310	1	1821732
11	21.6	5.1	0.0	chr19	11335606	11335644	(47281972)	+	G-rich	Low_complexity	1	41	(0)	1822083
197	24.5	5.4	0.0	chr19	11335920	11335972	(47281644)	C	L2c	LINE/L2	(62)	3325	3270	1822084
658	24.5	14.8	12.0	chr19	11423017	11423508	(47194108)	C	FordPrefect_a	DNA/hAT-Tip100	(0)	508	1	1822297
219	30.0	10.1	0.0	chr19	11423513	11423592	(47194024)	C	L2a	LINE/L2	(30)	3396	3308	1822298
442	21.6	16.6	2.3	chr19	11423610	11423784	(47193832)	C	L2	LINE/L2	(1475)	1944	1740	1822299
2181	12.6	0.0	0.0	chr19	12517380	12517689	(46099927)	C	AluSc8	SINE/Alu	(0)	311	2	1824598
2263	25.6	6.2	5.5	chr19	12517690	12517879	(46099737)	+	MER54A	LTR/ERVL	296	498	(146)	1824597
1496	16.6	4.1	1.3	chr19	12597490	12597794	(46019822)	C	L1MB2	LINE/L1	(49)	6122	5809	1824792
1631	5.3	19.5	0.8	chr19	12642135	12642379	(45975237)	+	AluY	SINE/Alu	1	302	(9)	1824908
2671	3.6	0.0	0.0	chr19	12650355	12650657	(45966959)	C	AluYk2	SINE/Alu	(8)	303	1	1824922
950	27.2	2.5	3.2	chr19	12846898	12847090	(45770526)	C	L2a	LINE/L2	(425)	2994	2795	1825349
13	17.5	0.0	6.8	chr19	12847262	12847305	(45770311)	+	(CTGCCC)n	Simple_repeat	1	44	(0)	1825351
15	15.9	2.9	0.0	chr19	15233135	15233169	(43384447)	+	(GGTGG)n	Simple_repeat	1	36	(0)	1831445
2531	3.8	1.4	0.0	chr19	15233783	15234075	(43383541)	+	AluY	SINE/Alu	1	297	(14)	1831446
1522	15.1	4.1	8.8	chr19	16293935	16294239	(42323377)	C	AluJr	SINE/Alu	(22)	290	1	1833624
2242	9.7	0.3	5.6	chr19	16797329	16797647	(41819969)	C	AluSz	SINE/Alu	(10)	302	1	1834817
14	29.7	1.9	0.0	chr19	17281965	17282018	(41335598)	+	G-rich	Low_complexity	1	55	(0)	1835927
11	21.3	4.4	2.1	chr19	18008899	18008943	(40608673)	+	(TGTCTC)n	Simple_repeat	1	47	(0)	1837841
350	19.5	1.1	6.5	chr19	18009258	18009350	(40608266)	+	MIRb	SINE/MIR	63	150	(118)	1837842
18	3.2	5.9	2.8	chr19	18156115	18156148	(40461468)	+	(GGCCCT)n	Simple_repeat	1	36	(0)	1838233
2162	10.3	0.0	0.0	chr19	18575764	18576045	(40041571)	C	AluY	SINE/Alu	(29)	282	1	1839161
684	22.1	1.4	4.0	chr19	18576177	18576325	(40041291)	C	AluJr4	SINE/Alu	(48)	264	120	1839162
25	12.6	16.3	1.9	chr19	18617719	18617853	(39999763)	+	G-rich	Low_complexity	1	157	(0)	1839230
17	30.3	4.4	1.1	chr19	18777505	18777594	(39840022)	+	(CGCC)n	Simple_repeat	1	94	(0)	1839541
221	35.8	0.0	2.4	chr19	19161041	19161123	(39456493)	+	MIRb	SINE/MIR	106	186	(82)	1840384
11	20.7	0.0	2.9	chr19	19628031	19628065	(38989551)	+	(CCGCGC)n	Simple_repeat	1	35	(0)	1841330
13	24.5	2.3	0.0	chr19	19628246	19628288	(38989328)	+	(CGCCC)n	Simple_repeat	1	44	(0)	1841331
20	15.8	5.0	3.2	chr19	19628804	19628863	(38988753)	+	(CCCTG)n	Simple_repeat	1	63	(0)	1841332
2525	6.4	0.0	0.6	chr19	19629079	19629389	(38988227)	+	AluSc	SINE/Alu	1	309	(0)	1841333
270	16.2	1.2	17.5	chr19	21484091	21484149	(37133467)	C	AluJb	SINE/Alu	(60)	242	199	1844102
1170	12.2	0.0	3.5	chr19	32862664	32862835	(25754781)	C	AluSx3	SINE/Alu	(10)	301	136	1855626
1696	8.9	0.0	0.4	chr19	32862856	32863092	(25754524)	C	7SK	RNA	(95)	236	1	1855627
18	26.9	3.9	1.2	chr19	33227034	33227110	(25390506)	+	G-rich	Low_complexity	1	80	(0)	1856442
14	17.6	0.0	0.0	chr19	33302768	33302799	(25314817)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1856557
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
54	42.6	0.3	0.0	chr19	36245991	36246274	(22371342)	+	(GT)n	Simple_repeat	1	285	(0)	1862217
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
40845	6.3	0.7	0.2	chr19	37107697	37114371	(21503245)	C	HERVK-int	LTR/ERVK	(95)	7441	744	1863858
11512	1.7	0.0	2.1	chr19	37288824	37290419	(21327197)	C	SST1	Satellite/centr	(0)	1563	1	1864177
11534	1.7	0.0	2.1	chr19	37293875	37295470	(21322146)	C	SST1	Satellite/centr	(0)	1563	1	1864185
348	22.5	3.6	0.0	chr19	37467986	37468065	(21149551)	+	MIR	SINE/MIR	38	120	(142)	1864480
2033	12.5	0.3	1.4	chr19	38412134	38412421	(20205195)	C	AluSz6	SINE/Alu	(27)	285	1	1866599
2563	11.0	16.1	8.1	chr19	38422422	38422904	(20194712)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1866618
2348	9.4	0.3	0.0	chr19	38465484	38465790	(20151826)	+	AluSp	SINE/Alu	2	309	(4)	1866724
12	20.3	11.3	0.0	chr19	38466411	38466472	(20151144)	+	(CCCTGAT)n	Simple_repeat	1	69	(0)	1866725
2427	7.0	1.0	0.0	chr19	38466500	38466800	(20150816)	C	AluY	SINE/Alu	(7)	304	1	1866726
249	31.3	1.0	1.0	chr19	38473200	38473299	(20144317)	+	MER91A	DNA/hAT-Tip100	97	196	(0)	1866742
2375	9.2	1.6	0.0	chr19	38474259	38474561	(20143055)	C	AluSx	SINE/Alu	(3)	309	2	1866743
2166	12.8	0.0	1.3	chr19	38487338	38487649	(20129967)	C	AluSg	SINE/Alu	(0)	310	3	1866775
794	17.2	0.0	0.8	chr19	38769177	38769310	(19848306)	C	AluJr4	SINE/Alu	(178)	134	2	1867400
387	29.9	5.2	1.1	chr19	38769330	38769515	(19848101)	C	L1MC4	LINE/L1	(150)	7892	7699	1867401
2298	11.2	0.0	0.0	chr19	38835041	38835345	(19782271)	C	AluSq2	SINE/Alu	(8)	305	1	1867555
1392	16.2	8.4	3.7	chr19	38835346	38835474	(19782142)	C	AluJb	SINE/Alu	(178)	134	2	1867554
393	29.0	11.1	3.5	chr19	38835475	38835651	(19781965)	+	L1M5	LINE/L1	5608	5798	(326)	1867553
1047	19.2	2.1	0.0	chr19	38835719	38835900	(19781716)	C	AluJb	SINE/Alu	(42)	270	85	1867556
1323	17.1	9.0	1.9	chr19	38835906	38836174	(19781442)	C	AluJb	SINE/Alu	(19)	293	4	1867557
1132	11.9	0.6	4.5	chr19	38868911	38869086	(19748530)	C	AluJo	SINE/Alu	(129)	183	15	1867627
14	27.6	1.7	3.3	chr19	38870110	38870169	(19747447)	+	(GCC)n	Simple_repeat	1	61	(0)	1867628
189	18.8	0.0	0.0	chr19	38976578	38976609	(19641007)	C	MIRb	SINE/MIR	(43)	225	194	1867894
2443	7.6	0.0	0.3	chr19	39404373	39404673	(19212943)	+	AluSq2	SINE/Alu	1	300	(13)	1869005
12	7.7	6.7	3.1	chr19	39499529	39499558	(19118058)	+	(ACCTCC)n	Simple_repeat	1	32	(0)	1869211
13	15.8	0.0	7.3	chr19	39516088	39516128	(19101488)	+	G-rich	Low_complexity	1	41	(0)	1869251
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
19	17.4	0.0	6.8	chr19	45489137	45489195	(13128421)	+	G-rich	Low_complexity	1	59	(0)	1881450
12	12.5	5.1	4.9	chr19	45489183	45489221	(13128395)	+	(AGGATT)n	Simple_repeat	1	41	(0)	1881451
14	32.4	1.1	4.5	chr19	45489250	45489337	(13128279)	+	G-rich	Low_complexity	1	89	(0)	1881452
339	27.1	14.1	3.9	chr19	45569776	45570009	(13047607)	+	MLT1K	LTR/ERVL-MaLR	349	610	(0)	1881662
578	23.5	4.9	0.0	chr19	45570244	45570379	(13047237)	+	Charlie7	DNA/hAT-Charlie	2083	2225	(387)	1881665
19	15.3	0.0	0.0	chr19	45804111	45804147	(12813469)	+	(TGAA)n	Simple_repeat	1	37	(0)	1882293
14	12.5	0.0	0.0	chr19	45804370	45804395	(12813221)	+	(TCC)n	Simple_repeat	1	26	(0)	1882294
36	23.7	1.9	1.8	chr19	45804710	45804816	(12812800)	+	(CCT)n	Simple_repeat	1	109	(0)	1882295
2509	6.6	0.0	1.9	chr19	46414711	46415027	(12202589)	+	AluSc8	SINE/Alu	1	311	(0)	1883599
296	9.8	0.0	0.0	chr19	46415069	46415109	(12202507)	+	LTR2C	LTR/ERV1	391	431	(70)	1883600
570	14.6	2.0	0.0	chr19	46415114	46415209	(12202407)	+	LTR2C	LTR/ERV1	404	501	(0)	1883600
233	29.2	6.2	5.0	chr19	46415286	46415410	(12202206)	C	MIRc	SINE/MIR	(79)	189	51	1883601
363	33.4	6.7	0.5	chr19	46795543	46795764	(11821852)	+	MIR	SINE/MIR	2	231	(31)	1884563
1887	18.5	0.0	1.0	chr19	46795849	46796162	(11821454)	+	AluJb	SINE/Alu	1	311	(1)	1884564
1989	8.4	8.0	0.0	chr19	47789159	47789433	(10828183)	+	AluSq4	SINE/Alu	2	300	(11)	1887065
982	13.9	2.3	0.0	chr19	47789434	47789583	(10828033)	C	L1MA3	LINE/L1	(6)	6299	6146	1887066
12	16.8	0.0	5.4	chr19	48312015	48312051	(10305565)	+	(GATCCT)n	Simple_repeat	1	37	(0)	1888441
14	19.1	8.7	2.7	chr19	48443197	48443265	(10174351)	+	(GCCGTC)n	Simple_repeat	1	75	(0)	1888783
261	24.2	2.2	6.3	chr19	48715049	48715169	(9902447)	C	MSR1	Satellite	(26)	116	1	1889453
2295	9.4	1.0	0.7	chr19	48728486	48728793	(9888823)	+	AluSx3	SINE/Alu	3	311	(0)	1889479
1167	24.4	5.8	5.5	chr19	48894659	48894847	(9722769)	+	MER2	DNA/TcMar-Tigger	163	345	(0)	1889883
1270	18.5	1.7	5.9	chr19	48894848	48894922	(9722694)	+	L1MB8	LINE/L1	6098	6169	(9)	1889874
245	30.6	0.0	2.7	chr19	48895232	48895342	(9722274)	C	MSR1	Satellite	(0)	111	4	1889886
2435	6.1	0.3	0.0	chr19	48895599	48895895	(9721721)	+	AluSp	SINE/Alu	2	299	(14)	1889887
2355	5.7	0.0	6.3	chr19	48898835	48899165	(9718451)	+	AluY	SINE/Alu	1	310	(1)	1889895
197	27.1	4.8	1.7	chr19	49130714	49130773	(9486843)	+	MIRb	SINE/MIR	115	176	(92)	1890440
2464	6.9	0.3	2.5	chr19	49137341	49137658	(9479958)	+	AluYj4	SINE/Alu	1	311	(0)	1890451
2051	7.4	1.5	0.4	chr19	49388453	49388709	(9228907)	+	AluSc8	SINE/Alu	39	298	(13)	1891013
668	5.1	2.5	0.2	chr19	49460915	49461596	(9156020)	C	MSR1	Satellite	(24)	697	1	1891140
26	0.0	3.5	0.0	chr19	49462121	49462149	(9155467)	+	(ATTTT)n	Simple_repeat	1	30	(0)	1891141
2139	9.1	0.3	1.1	chr19	49462150	49462434	(9155182)	C	AluSq2	SINE/Alu	(30)	283	1	1891142
334	31.4	0.0	0.0	chr19	49627384	49627485	(8990131)	+	MER5A1	DNA/hAT-Charlie	61	162	(4)	1891566
2243	8.9	0.0	3.0	chr19	49627523	49627826	(8989790)	+	AluSz	SINE/Alu	1	295	(17)	1891567
1392	6.0	8.0	0.0	chr19	49628054	49628237	(8989379)	+	MER107	DNA/hAT-Charlie	1	200	(0)	1891568
248	27.6	1.3	0.0	chr19	49690332	49690415	(8927201)	+	MIR1_Amn	SINE/MIR	62	151	(79)	1891688
2257	9.6	0.0	0.0	chr19	49914727	49915039	(8702577)	C	AluSx	SINE/Alu	(0)	312	1	1892193
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
2242	9.9	1.3	0.0	chr19	50519595	50519888	(8097728)	+	AluSz	SINE/Alu	1	298	(14)	1893681
179	12.5	0.0	0.4	chr19	50552524	50552801	(8064815)	+	(CATC)n	Simple_repeat	1	278	(0)	1893771
242	32.2	0.0	0.0	chr19	50552802	50552860	(8064756)	C	L2a	LINE/L2	(0)	3426	3368	1893772
612	30.1	1.4	1.1	chr19	50552886	50553085	(8064531)	+	MIR	SINE/MIR	17	211	(51)	1893773
1123	27.8	12.9	2.2	chr19	50553061	50553806	(8063810)	+	L2a	LINE/L2	2607	3426	(0)	1893774
492	24.6	0.0	0.0	chr19	51325870	51325979	(7291637)	+	MER5A	DNA/hAT-Charlie	1	110	(79)	1895390
15	9.5	5.8	7.3	chr19	51326324	51326375	(7291241)	+	(GATCCCA)n	Simple_repeat	1	55	(0)	1895391
740	24.8	8.5	0.8	chr19	52584465	52584822	(6032794)	C	L1M3	LINE/L1	(1513)	4627	4240	1897771
2479	16.2	4.2	6.8	chr19	52585487	52586017	(6031599)	C	MER51C	LTR/ERV1	(0)	640	124	1897772
1822	9.5	6.8	3.5	chr19	53649157	53649439	(4968177)	+	AluSx1	SINE/Alu	1	293	(19)	1899841
779	12.5	0.0	0.9	chr19	53649450	53649561	(4968055)	+	AluJr	SINE/Alu	1	111	(201)	1899842
12	13.7	0.0	0.0	chr19	53873550	53873573	(4744043)	+	(CAC)n	Simple_repeat	1	24	(0)	1900484
909	14.8	0.0	0.0	chr19	54165073	54165207	(4452409)	C	FLAM_C	SINE/Alu	(8)	135	1	1901203
13	10.3	6.4	6.0	chr19	55082232	55082278	(3535338)	+	(CGCCCCA)n	Simple_repeat	1	50	(0)	1902969
2234	9.8	0.0	7.4	chr19	55375854	55376190	(3241426)	C	AluSx	SINE/Alu	(0)	312	1	1903607
2494	7.1	0.0	0.7	chr19	55395433	55395742	(3221874)	C	AluY	SINE/Alu	(3)	308	1	1903643
778	27.4	0.8	1.3	chr19	55395753	55395989	(3221627)	C	L1ME4b	LINE/L1	(43)	849	614	1903644
1737	17.6	3.4	0.3	chr19	55395998	55396281	(3221335)	+	AluJo	SINE/Alu	3	295	(17)	1903645
672	23.9	12.5	5.0	chr19	55396295	55396479	(3221137)	C	L1ME3B	LINE/L1	(16)	6226	6012	1903646
367	35.1	13.8	5.0	chr19	55595341	55595643	(3021973)	+	L2b	LINE/L2	2991	3324	(51)	1904113
331	36.6	6.5	7.5	chr19	55595633	55596084	(3021532)	+	L2b	LINE/L2	2921	3367	(8)	1904114
890	17.3	11.1	0.9	chr19	55603339	55603548	(3014068)	C	MER8	DNA/TcMar-Tigger	(5)	234	1	1904127
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
14	27.1	0.0	0.0	chr19	56088061	56088104	(2529512)	+	(CGTCCT)n	Simple_repeat	1	44	(0)	1905088
14	23.5	4.3	4.1	chr19	56088248	56088317	(2529299)	+	(CCCGTG)n	Simple_repeat	1	73	(0)	1905089
18	19.6	6.8	2.6	chr19	56088344	56088416	(2529200)	+	(GGCCGC)n	Simple_repeat	1	78	(0)	1905090
205	27.4	9.1	1.6	chr19	56092272	56092374	(2525242)	C	MIRb	SINE/MIR	(37)	231	108	1905099
245	25.5	3.8	1.9	chr19	56092416	56092519	(2525097)	C	HAL1M8	LINE/L1	(662)	2329	2224	1905100
830	16.4	2.9	0.0	chr19	56092536	56092700	(2524916)	C	HAL1M8	LINE/L1	(849)	2142	1973	1905100
231	31.0	9.9	2.0	chr19	56093331	56093432	(2524184)	C	HAL1M8	LINE/L1	(981)	2010	1900	1905101
3718	5.7	5.0	0.0	chr19	57768407	57768865	(848751)	C	LTR2B	LTR/ERV1	(0)	483	1	1908288
2161	13.3	0.3	0.0	chr19	57769005	57769312	(848304)	+	AluSz6	SINE/Alu	1	309	(3)	1908289
2111	10.2	1.1	1.1	chr19	57777747	57778055	(839561)	C	AluSq2	SINE/Alu	(0)	313	1	1908305
2145	11.7	1.3	2.2	chr19	57868465	57868780	(748836)	+	AluSp	SINE/Alu	1	313	(0)	1908470
14	11.8	8.1	0.0	chr19	58034295	58034331	(583285)	+	G-rich	Low_complexity	1	40	(0)	1908754
2010	8.2	9.2	1.8	chr19	58267419	58267700	(349916)	+	AluSx1	SINE/Alu	1	305	(7)	1909226
2392	7.6	0.3	0.0	chr19	58267701	58267991	(349625)	+	AluY	SINE/Alu	1	292	(19)	1909227
481	34.1	10.3	4.6	chr19	58267992	58268017	(349599)	+	HAL1	LINE/L1	999	1020	(1487)	1909224
2414	9.6	0.3	0.6	chr19	58268018	58268329	(349287)	+	AluSp	SINE/Alu	1	311	(2)	1909228
13	21.4	1.6	7.8	chr19	58369231	58369293	(248323)	+	G-rich	Low_complexity	1	64	(0)	1909416
7941	3.4	12.7	0.7	chr19	58606191	58607452	(10164)	+	TAR1	Satellite/telo	314	1748	(363)	1909801
139	3.3	0.6	2.4	chr19	58607453	58607616	(10000)	+	(GGGTTA)n	Simple_repeat	1	165	(0)	1909802
158	21.6	0.4	6.7	chr2	10006	10174	(242183355)	+	(CCCAAC)n	Simple_repeat	1	387	(124)	1910809
164	8.9	0.3	4.8	chr2	10175	10462	(242183067)	+	(ACCCTA)n	Simple_repeat	1	289	(0)	1910810
158	21.6	0.4	6.7	chr2	10463	10514	(242183015)	+	(CCCAAC)n	Simple_repeat	388	511	(0)	1910809
40	7.7	0.0	5.2	chr2	10516	10592	(242182937)	+	(ACCCTA)n	Simple_repeat	1	77	(0)	1910811
6455	13.9	14.4	5.6	chr2	10601	12198	(242181331)	C	TAR1	Satellite/telo	(218)	1893	132	1910812
2075	18.6	3.6	1.6	chr2	460938	461373	(241732156)	+	MER65A	LTR/ERV1	1	445	(0)	1911270
275	30.2	6.5	3.6	chr2	927060	927224	(241266305)	+	MER5A	DNA/hAT-Charlie	1	170	(19)	1911720
180	31.9	4.2	1.4	chr2	927736	927805	(241265724)	+	MER5A	DNA/hAT-Charlie	111	182	(7)	1911721
235	32.0	6.2	5.4	chr2	3319482	3319610	(238873919)	C	MIR3	SINE/MIR	(70)	138	9	1914308
9875	18.0	3.1	4.7	chr2	3438576	3439304	(238754225)	C	L1MC2	LINE/L1	(333)	6011	5297	1914479
20	23.8	3.6	0.0	chr2	3486071	3486125	(238707404)	+	(CA)n	Simple_repeat	1	57	(0)	1914523
220	22.9	1.6	1.6	chr2	10536735	10536796	(231656733)	C	MER5B	DNA/hAT-Charlie	(110)	68	7	1924932
16	26.0	0.8	4.6	chr2	10536995	10537062	(231656467)	+	A-rich	Low_complexity	1	65	(0)	1924933
1784	7.8	0.5	0.0	chr2	10537279	10537497	(231656032)	+	AluSx	SINE/Alu	82	301	(11)	1924934
1258	16.4	3.6	0.5	chr2	23710622	23710925	(218482604)	+	MER2	DNA/TcMar-Tigger	7	345	(0)	1944710
200	24.6	1.7	3.4	chr2	23710928	23710986	(218482543)	C	MIRb	SINE/MIR	(1)	267	210	1944711
15	25.2	2.4	0.0	chr2	23711102	23711143	(218482386)	+	(AT)n	Simple_repeat	1	43	(0)	1944712
3835	17.3	6.1	3.0	chr2	25614775	25615760	(216577769)	C	MER21C	LTR/ERVL	(10)	928	8	1948233
254	32.3	3.1	3.1	chr2	27749586	27749713	(214443816)	+	MLT1K	LTR/ERVL-MaLR	1	128	(467)	1952417
14	27.9	2.7	4.0	chr2	28810646	28810719	(213382810)	+	(GCGG)n	Simple_repeat	1	76	(0)	1954258
332	32.0	6.2	5.1	chr2	28811152	28811309	(213382220)	+	L1M4b	LINE/L1	458	617	(6250)	1954259
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2509	7.3	0.0	0.0	chr2	44165726	44166026	(198027503)	+	AluSx1	SINE/Alu	1	301	(11)	1978727
445	30.0	3.7	5.8	chr2	44166027	44166175	(198027354)	C	MER5A	DNA/hAT-Charlie	(32)	157	3	1978726
293	7.9	0.0	0.0	chr2	44166350	44166387	(198027142)	+	THE1D-int	LTR/ERVL-MaLR	1466	1503	(128)	1978728
56	20.4	1.4	2.8	chr2	55269449	55269589	(186923940)	+	(TTTC)n	Simple_repeat	1	143	(0)	1995600
2339	11.5	0.0	0.6	chr2	61450938	61451249	(180742280)	+	AluSx3	SINE/Alu	1	310	(1)	2004342
2248	11.5	1.0	0.0	chr2	61451404	61451708	(180741821)	+	AluSp	SINE/Alu	2	309	(4)	2004343
12875	11.1	2.9	2.0	chr2	64774155	64775106	(177418423)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1456	2009912
362	30.5	9.6	1.0	chr2	64860516	64860714	(177332815)	+	L2a	LINE/L2	409	626	(2793)	2010077
194	30.2	0.0	0.0	chr2	66390933	66390985	(175802544)	+	MER5A	DNA/hAT-Charlie	74	126	(63)	2012734
1339	18.1	2.9	0.0	chr2	69046985	69047216	(173146313)	+	MER8	DNA/TcMar-Tigger	1	239	(0)	2016442
392	20.3	0.0	0.0	chr2	70144341	70144414	(172049115)	+	MER5A1	DNA/hAT-Charlie	93	166	(0)	2018491
2255	9.7	0.3	0.3	chr2	70144553	70144850	(172048679)	+	AluSp	SINE/Alu	1	298	(15)	2018492
33	0.0	0.0	0.0	chr2	70888454	70888481	(171305048)	+	(AC)n	Simple_repeat	1	28	(0)	2019776
7772	6.7	0.0	6.2	chr2	70976795	70977868	(171215661)	C	LTR13	LTR/ERVK	(0)	1007	1	2019924
2208	20.0	1.4	1.9	chr2	71014657	71017022	(171176507)	C	SATR2	Satellite	(1832)	5158	2261	2019995
894	21.2	17.8	9.5	chr2	71017023	71017461	(171176068)	C	SATR1	Satellite	(4)	475	1	2019996
34	8.7	0.0	0.0	chr2	85133696	85133744	(157059785)	+	(CGG)n	Simple_repeat	1	49	(0)	2040185
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2159	10.4	0.0	0.0	chr2	96215540	96215852	(145977677)	C	AluSg	SINE/Alu	(0)	310	1	2051765
717	18.0	7.9	0.0	chr2	96215881	96216008	(145977521)	+	MER2	DNA/TcMar-Tigger	1	139	(206)	2051766
1645	7.8	6.1	1.7	chr2	96216009	96216242	(145977287)	C	MER1B	DNA/hAT-Charlie	(0)	339	95	2051767
1231	11.5	10.7	0.0	chr2	96216257	96216448	(145977081)	+	MER2	DNA/TcMar-Tigger	130	344	(1)	2051768
482	23.4	6.7	4.1	chr2	97267197	97267793	(144925736)	+	L1PA12	LINE/L1	799	1173	(5808)	2053498
346	24.5	2.0	1.0	chr2	97267797	97267895	(144925634)	+	L1PA12	LINE/L1	798	897	(6084)	2053499
327	26.1	2.1	0.0	chr2	97267902	97267993	(144925536)	+	L1PA12	LINE/L1	799	892	(6089)	2053500
490	21.2	10.1	1.4	chr2	97268018	97268313	(144925216)	+	L1PA12	LINE/L1	799	1173	(5808)	2053499
515	25.0	3.9	9.4	chr2	97268327	97268819	(144924710)	+	L1PA12	LINE/L1	799	1173	(5808)	2053499
3111	12.1	0.9	1.4	chr2	113601977	113602680	(128590849)	+	TAR1	Satellite/telo	1	700	(1434)	2077035
136	13.6	0.4	2.4	chr2	113602682	113602928	(128590601)	+	G-rich	Low_complexity	1	248	(0)	2077036
329	8.5	1.5	3.4	chr2	113602929	113603477	(128590052)	+	(CTAACC)n	Simple_repeat	1	557	(0)	2077037
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
2129	12.4	6.8	1.1	chr2	119687341	119687699	(122505830)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2085763
1473	21.9	8.6	8.1	chr2	119687700	119687867	(122505662)	+	MLT1F2	LTR/ERVL-MaLR	390	559	(1)	2085762
532	27.4	7.6	1.3	chr2	119687876	119688182	(122505347)	+	L1ME4c	LINE/L1	299	626	(204)	2085764
2507	8.0	0.3	1.3	chr2	120024460	120024758	(122168771)	C	AluY	SINE/Alu	(15)	296	1	2086332
15479	8.0	1.2	1.8	chr2	120024759	120025391	(122168138)	C	L1PA7	LINE/L1	(2254)	3892	3255	2086331
1981	10.7	6.4	2.7	chr2	128062785	128063083	(114130446)	+	AluSx1	SINE/Alu	1	311	(1)	2098582
352	32.8	2.5	1.7	chr2	129828457	129828574	(112364955)	+	L1MEd	LINE/L1	560	678	(6425)	2100933
1535	28.4	6.5	1.9	chr2	129828575	129829156	(112364373)	+	MLT1E	LTR/ERVL-MaLR	1	611	(13)	2100934
122	13.9	0.3	7.4	chr2	131812729	131813025	(110380504)	+	(CCCTAA)n	Simple_repeat	1	276	(0)	2103754
2242	16.8	12.5	0.4	chr2	131813170	131813660	(110379869)	C	TAR1	Satellite/telo	(43)	2068	1510	2103755
423	10.0	0.0	0.0	chr2	140544133	140544192	(101649337)	C	L1PREC2	LINE/L1	(16)	6144	6085	2116229
330	15.2	1.7	0.0	chr2	140544199	140544257	(101649272)	C	L1PREC2	LINE/L1	(16)	6144	6085	2116229
388	13.3	0.0	0.0	chr2	140544264	140544323	(101649206)	C	L1PREC2	LINE/L1	(16)	6144	6085	2116229
13004	12.4	3.9	0.9	chr2	140544330	140546000	(101647529)	C	L1PA13	LINE/L1	(19)	6144	4401	2116230
854	24.0	10.6	3.8	chr2	152116077	152116392	(90077137)	C	MLT1C	LTR/ERVL-MaLR	(52)	415	76	2131890
1099	17.9	9.0	5.3	chr2	152116393	152116421	(90077108)	+	MER44A	DNA/TcMar-Tigger	1	21	(318)	2131891
2308	9.5	1.0	0.0	chr2	152116422	152116715	(90076814)	C	AluSq2	SINE/Alu	(16)	297	1	2131892
2350	11.6	0.3	0.0	chr2	159748967	159749277	(82444252)	C	AluSx	SINE/Alu	(0)	312	1	2142085
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
194	20.8	8.6	3.6	chr2	169573383	169573437	(72620092)	+	MIRc	SINE/MIR	55	112	(156)	2155202
243	36.6	11.2	1.4	chr2	174250572	174250715	(67942814)	C	MamSINE1	SINE/tRNA-RTE	(57)	233	74	2162953
2487	5.9	0.0	0.0	chr2	174250864	174251152	(67942377)	+	AluYc3	SINE/Alu	2	290	(10)	2162954
2089	15.2	0.0	0.0	chr2	175164252	175164553	(67028976)	+	AluSz	SINE/Alu	1	302	(10)	2164410
3226	27.0	10.1	4.6	chr2	178421402	178423900	(63769629)	C	ERV3-16A3_I-int	LTR/ERVL	(233)	4993	2346	2169066
188	26.9	9.7	0.0	chr2	189581422	189581514	(52612015)	C	MIR3	SINE/MIR	(3)	205	103	2183044
2068	14.9	0.0	0.3	chr2	197694418	197694718	(44498811)	C	AluSx1	SINE/Alu	(1)	311	12	2194494
7069	10.1	2.8	5.2	chr2	197694719	197695412	(44498117)	C	L1PB2	LINE/L1	(1914)	4232	3567	2194488
41	0.0	2.4	0.0	chr2	197695413	197695453	(44498076)	+	(TTTA)n	Simple_repeat	1	42	(0)	2194495
2436	10.9	6.1	5.4	chr2	200865315	200865570	(41327959)	C	LTR46	LTR/ERV1	(0)	460	192	2199014
1889	9.0	11.6	0.0	chr2	200865571	200865837	(41327692)	C	AluSx	SINE/Alu	(6)	306	5	2199015
2436	10.9	6.1	5.4	chr2	200865838	200866005	(41327524)	C	LTR46	LTR/ERV1	(269)	191	33	2199014
1987	11.8	0.3	3.7	chr2	202379839	202380165	(39813364)	C	AluSg4	SINE/Alu	(0)	310	1	2201860
2282	12.3	0.6	2.5	chr2	202456160	202456477	(39737052)	C	AluSx1	SINE/Alu	(0)	312	1	2202057
356	24.0	3.0	0.0	chr2	219497358	219497453	(22696076)	C	MIRb	SINE/MIR	(166)	102	4	2228032
460	26.1	4.7	1.4	chr2	219497481	219497624	(22695905)	C	MIRc	SINE/MIR	(45)	223	75	2228033
14	19.5	2.3	2.3	chr2	219559123	219559165	(22634364)	+	G-rich	Low_complexity	1	44	(0)	2228121
20	8.3	2.4	4.7	chr2	219559586	219559627	(22633902)	+	(ATA)n	Simple_repeat	1	43	(0)	2228122
535	30.6	3.9	2.0	chr2	219559628	219559830	(22633699)	C	MER46C	DNA/TcMar-Tigger	(1)	337	131	2228123
2625	18.0	13.9	2.6	chr2	235633071	235633311	(6560218)	C	MER39	LTR/ERV1	(2)	705	464	2253925
2314	9.9	0.3	0.0	chr2	235633312	235633603	(6559926)	+	AluSq2	SINE/Alu	1	293	(20)	2253926
393	24.8	3.9	0.8	chr2	237643258	237643383	(4550146)	+	MER5A	DNA/hAT-Charlie	42	171	(18)	2256649
33	0.0	0.0	0.0	chr2	237643736	237643766	(4549763)	+	(ATGA)n	Simple_repeat	1	31	(0)	2256650
546	21.9	15.8	3.4	chr2	239864650	239864914	(2328615)	+	MLT1A0	LTR/ERVL-MaLR	19	322	(43)	2259409
279	26.8	6.7	0.0	chr2	239865095	239865206	(2328323)	+	L2	LINE/L2	2558	2677	(742)	2259410
13	7.0	10.0	0.0	chr2	240159667	240159696	(2033833)	+	(CTGC)n	Simple_repeat	1	33	(0)	2259759
254	27.3	19.5	0.4	chr2	241580250	241580481	(613048)	+	L1MC5a	LINE/L1	830	1116	(1661)	2261372
17	23.2	0.0	2.1	chr2	241725294	241725341	(468188)	+	G-rich	Low_complexity	1	48	(0)	2261626
462	27.3	0.3	0.2	chr2	241822669	241823865	(369664)	+	(CTCTCT)n	Simple_repeat	1	1201	(0)	2261745
2292	11.4	1.3	0.0	chr2	241824528	241824833	(368696)	C	AluSx1	SINE/Alu	(2)	310	1	2261746
3480	13.2	3.4	5.4	chr2	241911848	241912454	(281075)	C	PRIMA4_LTR	LTR/ERV1	(0)	594	1	2261847
578	26.8	8.6	0.0	chr2	241946761	241946995	(246534)	C	L1MC3	LINE/L1	(155)	7630	7374	2261879
438	31.4	3.5	0.5	chr2	241947074	241947265	(246264)	C	L1MC3	LINE/L1	(762)	7023	6826	2261879
298	30.3	3.7	4.3	chr2	241947275	241947436	(246093)	C	L1MC3	LINE/L1	(1240)	6545	6385	2261879
11301	0.4	16.2	0.0	chr2	242181833	242183303	(10226)	+	TAR1	Satellite/telo	314	2069	(42)	2262199
143	9.2	0.4	1.3	chr2	242183304	242183529	(10000)	+	(AGGGTT)n	Simple_repeat	1	227	(0)	2262200
1698	18.8	6.9	10.0	chr20	2085174	2085491	(62358676)	C	Charlie1b	DNA/hAT-Charlie	(47)	476	150	2266248
1335	18.4	2.1	0.0	chr20	2085492	2085725	(62358442)	+	MER8	DNA/TcMar-Tigger	1	239	(0)	2266249
1698	18.8	6.9	10.0	chr20	2085726	2085886	(62358281)	C	Charlie1b	DNA/hAT-Charlie	(374)	149	13	2266248
204	25.4	7.4	0.0	chr20	2085932	2085994	(62358173)	+	L2b	LINE/L2	3273	3340	(35)	2266242
21	15.5	0.0	0.0	chr20	2085995	2086030	(62358137)	+	GA-rich	Low_complexity	1	36	(0)	2266250
12	13.1	2.7	5.3	chr20	3752171	3752207	(60691960)	+	(GCGCCG)n	Simple_repeat	1	38	(0)	2269430
26	12.3	0.0	0.0	chr20	18056765	18056838	(46387329)	+	(CGCTGC)n	Simple_repeat	1	74	(0)	2292018
385	19.0	6.5	0.8	chr20	18289356	18289472	(46154695)	C	L1MC5	LINE/L1	(6)	9298	9175	2292463
1647	10.5	0.0	0.4	chr20	18295213	18295451	(46148716)	C	7SK	RNA	(93)	238	1	2292472
2101	12.1	0.0	0.0	chr20	19921886	19922165	(44522002)	C	AluSz	SINE/Alu	(32)	280	1	2294882
577	24.9	5.1	11.5	chr20	19922166	19922291	(44521876)	C	LTR16A2	LTR/ERVL	(175)	320	205	2294880
19	11.7	0.0	0.0	chr20	25697252	25697279	(38746888)	+	(T)n	Simple_repeat	1	28	(0)	2302618
21	30.9	1.4	0.0	chr20	25867722	25867792	(38576375)	+	GA-rich	Low_complexity	1	72	(0)	2302877
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
1972	10.1	0.3	6.2	chr20	29401646	29401950	(35042217)	+	LTR66	LTR/ERVL	153	439	(171)	2304080
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
25	29.5	0.0	0.0	chr20	32189867	32189944	(32254223)	+	(CCT)n	Simple_repeat	1	78	(0)	2307868
308	25.0	1.0	3.9	chr20	33700727	33700737	(30743430)	+	L1MC5a	LINE/L1	859	868	(129)	2311375
9526	7.4	0.6	13.7	chr20	33700738	33702334	(30741833)	+	SVA_D	Retroposon/SVA	1	1386	(0)	2311376
376	27.3	0.0	11.5	chr20	35256741	35256857	(29187310)	C	MER5A	DNA/hAT-Charlie	(56)	133	26	2314892
202	30.9	0.0	1.4	chr20	35256911	35256979	(29187188)	C	MER5A	DNA/hAT-Charlie	(24)	165	98	2314894
201	21.3	1.6	6.2	chr20	35257439	35257503	(29186664)	C	MIR	SINE/MIR	(6)	256	195	2314895
220	27.4	6.7	5.6	chr20	36042615	36042703	(28401464)	C	MIRb	SINE/MIR	(75)	193	104	2316714
1192	13.9	2.1	0.5	chr20	36042712	36042750	(28401417)	C	L1M3	LINE/L1	(488)	5683	5645	2316715
985	20.9	11.3	0.5	chr20	36042751	36042962	(28401205)	+	MER8	DNA/TcMar-Tigger	1	238	(1)	2316716
1192	13.9	2.1	0.5	chr20	36042963	36043110	(28401057)	C	L1M3	LINE/L1	(527)	5644	5493	2316715
2164	11.7	0.0	0.0	chr20	36043111	36043446	(28400721)	C	AluSx1	SINE/Alu	(0)	312	1	2316717
12	18.7	5.8	3.6	chr20	38674526	38674577	(25769590)	+	(CCCCACA)n	Simple_repeat	1	55	(0)	2322625
181	21.3	0.0	6.0	chr20	38674894	38674943	(25769224)	C	L2b	LINE/L2	(195)	3180	3134	2322626
651	27.3	13.0	0.3	chr20	38675455	38675737	(25768430)	+	L2a	LINE/L2	3103	3426	(0)	2322627
1375	11.4	9.2	6.5	chr20	41437372	41437634	(23006533)	+	MER44A	DNA/TcMar-Tigger	22	292	(47)	2327556
380	23.6	1.1	0.0	chr20	41437659	41437751	(23006416)	C	MER2B	DNA/TcMar-Tigger	(1)	335	258	2327557
2435	8.8	0.3	0.0	chr20	43782518	43782823	(20661344)	C	AluSp	SINE/Alu	(6)	307	1	2331982
1404	13.4	0.0	0.0	chr20	43782825	43783025	(20661142)	C	MER41-int	LTR/ERV1	(17)	5929	5729	2331981
567	15.7	2.2	0.0	chr20	43783022	43783110	(20661057)	C	MER41-int	LTR/ERV1	(5855)	91	1	2331983
925	13.7	5.2	0.0	chr20	43783112	43783231	(20660936)	C	MER41A	LTR/ERV1	(1)	553	434	2331983
246	27.6	3.6	5.6	chr20	48516039	48516180	(15927987)	+	MLT2B4	LTR/ERVL	285	423	(133)	2342257
763	19.9	0.4	0.6	chr20	48516181	48516442	(15927725)	+	D20S16	Satellite	13096	13453	(6)	2342240
254	27.6	6.0	8.4	chr20	48516332	48516485	(15927682)	+	MLT2B4	LTR/ERVL	282	431	(125)	2342258
8110	25.2	5.5	3.3	chr20	49281578	49282133	(15162034)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	7026	2344009
8110	25.2	5.5	3.3	chr20	49282371	49284126	(15160041)	C	HERVIP10B3-int	LTR/ERV1	(578)	7025	5239	2344009
2602	21.8	1.1	0.2	chr20	49284129	49284587	(15159580)	C	HERVIP10B3-int	LTR/ERV1	(4621)	3116	2654	2344011
3400	23.4	4.5	0.7	chr20	49284951	49285785	(15158382)	C	HERVIP10B3-int	LTR/ERV1	(5128)	2475	1608	2344011
1674	22.5	8.3	5.2	chr20	49285787	49286284	(15157883)	C	HERVIP10B3-int	LTR/ERV1	(6108)	1495	981	2344011
338	13.0	0.0	0.0	chr20	57054789	57054842	(7389325)	C	MER81	DNA/hAT-Blackjack	(4)	110	57	2360456
1024	5.8	0.0	0.0	chr20	57054845	57054964	(7389203)	C	AluSx3	SINE/Alu	(11)	300	181	2360457
2243	8.6	0.0	4.8	chr20	62255099	62255411	(2188756)	C	AluSx1	SINE/Alu	(13)	299	2	2368360
2206	13.5	0.0	0.3	chr20	62255493	62255804	(2188363)	C	AluSz	SINE/Alu	(1)	311	1	2368361
314	30.0	11.4	6.9	chr20	62372985	62373366	(2070801)	C	HAL1b	LINE/L1	(1167)	1254	901	2368473
976	25.3	14.2	2.9	chr20	62843092	62843539	(1600628)	+	L1MC5a	LINE/L1	2253	2759	(18)	2368999
2426	9.6	0.0	0.6	chr20	62870376	62870689	(1573478)	C	AluSx	SINE/Alu	(0)	312	1	2369054
1739	21.4	2.5	4.8	chr20	62870690	62870780	(1573387)	C	MLT1A0	LTR/ERVL-MaLR	(287)	78	1	2369053
626	22.0	11.2	4.2	chr20	62870781	62870794	(1573373)	+	L1M4	LINE/L1	4612	4619	(1527)	2369049
323	25.7	1.9	0.0	chr20	62870837	62870937	(1573230)	+	MLT2F	LTR/ERVL	238	340	(323)	2369055
8206	5.6	1.7	0.1	chr20	62873549	62874539	(1569628)	+	LTR13	LTR/ERVK	1	1007	(0)	2369061
1861	31.6	7.8	4.8	chr20	62874540	62875101	(1569066)	+	ERVL-E-int	LTR/ERVL	573	1157	(4510)	2369060
263	27.5	10.1	2.7	chr20	63342955	63343100	(1101067)	+	L1ME3	LINE/L1	5487	5644	(598)	2369502
812	20.9	19.1	0.4	chr20	63501202	63501465	(942702)	+	MSTD	LTR/ERVL-MaLR	21	345	(51)	2369621
1065	29.8	8.1	3.6	chr20	63508244	63508782	(935385)	C	L1ME1	LINE/L1	(288)	5891	5324	2369637
2226	10.6	1.0	0.0	chr20	63802141	63802432	(641735)	+	AluSz6	SINE/Alu	1	295	(17)	2370050
793	20.0	2.4	5.2	chr20	63802433	63802512	(641655)	+	MLT1C	LTR/ERVL-MaLR	130	205	(262)	2370049
1031	8.8	0.0	2.2	chr20	63908817	63908953	(535214)	+	AluSz	SINE/Alu	1	134	(178)	2370232
1283	7.4	0.0	0.6	chr20	63908955	63909117	(535050)	+	U1	snRNA	1	162	(3)	2370233
2010	10.0	8.2	0.0	chr20	63909149	63909255	(534912)	+	AluSx	SINE/Alu	2	132	(180)	2370234
2150	5.8	0.4	1.8	chr20	63909256	63909532	(534635)	+	AluY	SINE/Alu	39	311	(0)	2370235
1661	12.3	6.0	3.6	chr20	63924574	63924795	(519372)	+	AluSz6	SINE/Alu	3	230	(82)	2370269
2708	18.8	7.3	5.3	chr20	63924796	63925203	(518964)	C	LTR27	LTR/ERV1	(3)	633	213	2370270
2212	10.3	0.3	0.3	chr20	63925204	63925494	(518673)	+	AluSx4	SINE/Alu	1	291	(19)	2370271
2022	9.2	7.0	0.3	chr20	63938029	63938310	(505857)	C	AluSx3	SINE/Alu	(9)	302	1	2370287
15	23.4	1.5	5.9	chr20	63938717	63938783	(505384)	+	(GGCGG)n	Simple_repeat	1	68	(0)	2370288
258	26.0	1.4	1.4	chr20	64178434	64178507	(265660)	C	L1MC4a	LINE/L1	(312)	7570	7497	2370571
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
981	21.9	0.0	0.5	chr20	64287652	64287838	(156329)	C	AluJb	SINE/Alu	(10)	302	117	2370667
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
934	22.4	4.6	2.9	chr21	9131002	9131341	(37578642)	+	MER66A	LTR/ERV1	93	438	(40)	2374267
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1376	6.8	0.0	0.0	chr21	10405143	10405305	(36304678)	+	AluSq4	SINE/Alu	1	163	(148)	2375495
25	18.6	7.6	0.0	chr21	10405379	10405457	(36304526)	+	(CCCCAAT)n	Simple_repeat	1	85	(0)	2375496
15	18.4	4.7	0.0	chr21	10405422	10405464	(36304519)	+	(ATCCGCG)n	Simple_repeat	1	45	(0)	2375497
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
620	23.1	11.5	2.4	chr21	10427740	10427952	(36282031)	C	MIR	SINE/MIR	(11)	251	17	2375543
2079	25.8	6.7	6.1	chr21	14061930	14063770	(32646213)	C	REP522	Satellite/telo	(0)	1852	1	2377307
17	25.3	6.5	2.0	chr21	14064126	14064217	(32645766)	+	(TGGATCT)n	Simple_repeat	1	98	(0)	2377308
2039	12.6	3.5	3.5	chr21	16397734	16398534	(30311449)	C	LTR7B	LTR/ERV1	(0)	464	1	2380389
205	22.9	1.6	0.0	chr21	31099042	31099102	(15610881)	+	MER5B	DNA/hAT-Charlie	22	83	(95)	2400760
212	24.6	10.3	9.0	chr21	31099546	31099679	(15610304)	+	MIRc	SINE/MIR	118	253	(15)	2400761
21	22.6	0.0	4.5	chr21	33480035	33480101	(13229882)	+	(GGCGG)n	Simple_repeat	1	67	(0)	2405072
258	31.4	5.5	6.0	chr21	33480461	33480626	(13229357)	C	MIR3	SINE/MIR	(30)	178	14	2405073
16	9.3	0.0	0.0	chr21	33480633	33480655	(13229328)	+	(T)n	Simple_repeat	1	23	(0)	2405074
18	15.9	6.1	0.0	chr21	36707935	36707991	(10001992)	+	G-rich	Low_complexity	1	60	(0)	2410361
949	15.1	8.7	0.6	chr21	37558550	37558729	(9151254)	C	MLT1D	LTR/ERVL-MaLR	(308)	197	2	2411784
242	25.7	0.0	0.0	chr21	37558859	37558928	(9151055)	C	HAL1	LINE/L1	(365)	2142	2073	2411785
487	28.5	7.0	1.6	chr21	42003024	42003212	(4706771)	+	MIRb	SINE/MIR	22	221	(47)	2418295
194	28.4	11.8	0.0	chr21	42614499	42614565	(4095418)	C	MIRc	SINE/MIR	(73)	195	120	2419094
5697	11.5	5.4	0.4	chr21	42917114	42918026	(3791957)	C	HERVH48-int	LTR/ERV1	(229)	7618	5794	2419570
1943	18.6	9.5	1.5	chr21	42953356	42955408	(3754575)	+	SATR1	Satellite	1	2216	(8)	2419613
3573	9.1	0.4	0.2	chr21	42955409	42955905	(3754078)	C	HERVE-int	LTR/ERV1	(2636)	5177	4680	2419614
2452	10.0	0.7	0.0	chr21	42978474	42978783	(3731200)	C	AluSz	SINE/Alu	(0)	312	1	2419668
602	16.1	0.0	0.0	chr21	42978785	42978877	(3731106)	C	FLAM_A	SINE/Alu	(8)	134	42	2419669
1345	22.5	0.0	5.9	chr21	42978911	42979217	(3730766)	C	AluJr	SINE/Alu	(23)	289	1	2419670
1160	15.6	2.7	1.8	chr21	42979220	42979441	(3730542)	C	Tigger1	DNA/TcMar-Tigger	(2181)	237	14	2419665
265	21.6	11.1	0.0	chr21	44818659	44818746	(1891237)	C	MIR	SINE/MIR	(118)	144	46	2422190
407	32.6	4.7	0.5	chr21	45501127	45501311	(1208672)	+	L1M5	LINE/L1	2349	2541	(3605)	2422896
13	18.4	0.0	4.9	chr21	46284068	46284108	(425875)	+	(CTTCTTT)n	Simple_repeat	1	41	(0)	2423729
352	25.4	0.0	0.0	chr21	46293668	46293738	(416245)	C	LTR8B	LTR/ERV1	(670)	150	80	2423742
401	21.1	0.0	0.0	chr21	46293742	46293812	(416171)	C	LTR8B	LTR/ERV1	(670)	150	80	2423742
386	22.5	0.0	0.0	chr21	46293816	46293886	(416097)	C	LTR8B	LTR/ERV1	(670)	150	80	2423742
782	21.4	2.4	6.5	chr21	46302995	46303017	(406966)	+	L1M5	LINE/L1	5145	5164	(982)	2423758
1583	13.4	0.7	13.2	chr21	46303018	46303359	(406624)	+	AluJo	SINE/Alu	2	300	(12)	2423759
2123	11.6	0.3	0.0	chr21	46340898	46341182	(368801)	C	AluSz	SINE/Alu	(26)	286	1	2423847
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
462	27.9	8.7	6.5	chr22	11572715	11572789	(39245679)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	335	2425190
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
209	28.5	6.8	5.6	chr22	18136788	18136947	(32681521)	C	L2	LINE/L2	(432)	2987	2826	2430282
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
13	13.2	6.1	0.0	chr22	19150071	19150103	(31668365)	+	(GCAGCA)n	Simple_repeat	1	35	(0)	2431508
313	34.1	4.3	2.8	chr22	19670864	19671116	(31147352)	C	L1ME3G	LINE/L1	(151)	773	517	2432403
17	14.2	0.0	0.0	chr22	19719133	19719163	(31099305)	+	(CCG)n	Simple_repeat	1	31	(0)	2432480
1952	9.6	0.0	0.0	chr22	21129085	21129344	(29689124)	+	AluY	SINE/Alu	34	293	(18)	2434618
23	3.7	0.0	0.0	chr22	21129345	21129372	(29689096)	+	(GA)n	Simple_repeat	1	28	(0)	2434619
3805	23.5	4.8	4.2	chr22	21748231	21749095	(29069373)	+	L1MCb	LINE/L1	661	1544	(4878)	2435815
1497	14.9	7.7	3.7	chr22	22509279	22509578	(28308890)	+	MER58B	DNA/hAT-Charlie	26	338	(3)	2436960
221	28.4	1.9	8.1	chr22	22557441	22557551	(28260917)	C	MIRc	SINE/MIR	(120)	148	45	2437078
234	19.4	11.4	0.0	chr22	23763630	23763691	(27054777)	C	MER5A	DNA/hAT-Charlie	(2)	187	118	2438932
1622	16.7	6.1	1.4	chr22	24590126	24590407	(26228061)	C	AluJr4	SINE/Alu	(5)	307	12	2440308
1266	17.4	0.5	0.5	chr22	24769039	24769252	(26049216)	C	MER2	DNA/TcMar-Tigger	(0)	345	132	2440593
1823	18.4	3.5	0.9	chr22	24986273	24986607	(25831861)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	2441171
305	31.5	11.0	4.0	chr22	29071886	29072037	(21746431)	C	MIRb	SINE/MIR	(38)	230	67	2449832
542	23.0	0.9	0.0	chr22	29585563	29585675	(21232793)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2450923
2230	6.0	0.0	1.1	chr22	29585761	29586070	(21232398)	C	AluY	SINE/Alu	(0)	311	1	2450924
236	24.6	5.5	1.4	chr22	29602587	29602656	(21215812)	C	MIR	SINE/MIR	(34)	228	156	2450971
2107	5.5	2.9	0.0	chr22	29602675	29602947	(21215521)	+	AluSp	SINE/Alu	1	281	(32)	2450972
44	2.2	0.0	2.0	chr22	29602950	29602998	(21215470)	+	(AAT)n	Simple_repeat	1	49	(0)	2450973
1205	18.9	1.3	3.0	chr22	29905148	29905382	(20913086)	C	MER8	DNA/TcMar-Tigger	(8)	231	1	2451622
263	14.3	0.0	0.0	chr22	29939689	29939730	(20878738)	C	5S	rRNA	(79)	42	1	2451682
2730	9.9	4.7	4.7	chr22	29939781	29940004	(20878464)	+	LTR7B	LTR/ERV1	1	235	(229)	2451683
2373	5.4	0.0	0.4	chr22	29940005	29940281	(20878187)	+	AluY	SINE/Alu	20	295	(16)	2451684
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2120	15.8	8.7	1.4	chr22	35691302	35691527	(15126941)	C	SATR1	Satellite	(49)	873	524	2463593
247	26.5	1.5	17.2	chr22	35691528	35691846	(15126622)	+	SATR2	Satellite	1	268	(51)	2463594
2120	15.8	8.7	1.4	chr22	35691847	35692181	(15126287)	C	SATR1	Satellite	(49)	523	1	2463593
1999	18.3	9.2	1.0	chr22	35696413	35697520	(15120948)	+	SATR1	Satellite	1	2149	(248)	2463597
266	34.4	2.7	1.6	chr22	37664776	37664961	(13153507)	C	L1ME4c	LINE/L1	(295)	535	348	2467769
240	35.1	14.1	1.4	chr22	37665024	37665245	(13153223)	C	MIRc	SINE/MIR	(0)	268	14	2467770
540	30.1	8.9	0.3	chr22	37665220	37665411	(13153057)	C	MIR	SINE/MIR	(44)	224	12	2467771
212	24.7	13.6	2.2	chr22	37665407	37665497	(13152971)	+	MIR1_Amn	SINE/MIR	31	133	(97)	2467772
16	20.7	0.0	4.2	chr22	37905344	37905391	(12913077)	+	(GGCT)n	Simple_repeat	1	48	(0)	2468377
18	5.3	0.0	12.0	chr22	38108988	38109037	(12709431)	+	G-rich	Low_complexity	1	50	(0)	2468815
544	27.6	11.2	5.7	chr22	38109743	38109969	(12708499)	+	MIR	SINE/MIR	15	255	(7)	2468816
1118	16.1	9.0	7.0	chr22	38307199	38307298	(12511170)	+	MER2	DNA/TcMar-Tigger	130	220	(125)	2469221
1865	8.7	1.5	1.9	chr22	38307299	38307562	(12510906)	+	AluSg	SINE/Alu	31	293	(17)	2469223
1118	16.1	9.0	7.0	chr22	38307563	38307686	(12510782)	+	MER2	DNA/TcMar-Tigger	221	337	(8)	2469221
1898	14.4	2.4	0.0	chr22	38307699	38307989	(12510479)	C	AluJb	SINE/Alu	(14)	298	1	2469224
646	19.4	4.6	5.6	chr22	38308002	38308198	(12510270)	C	L1MB7	LINE/L1	(131)	6053	5859	2469225
2077	12.4	0.7	1.0	chr22	39009023	39009320	(11809148)	C	AluSx3	SINE/Alu	(14)	297	1	2470706
1331	22.0	1.8	5.3	chr22	39009323	39009678	(11808790)	+	L1MD2	LINE/L1	5583	5925	(434)	2470707
1653	13.8	0.0	0.0	chr22	39039429	39039689	(11778779)	+	MER49	LTR/ERV1	642	902	(21)	2470766
1638	10.6	0.3	20.4	chr22	39039693	39040102	(11778366)	+	AluSx1	SINE/Alu	1	312	(0)	2470769
182	29.8	5.0	6.0	chr22	40637270	40637369	(10181099)	+	MIRc	SINE/MIR	98	196	(72)	2473973
73	7.9	0.0	0.0	chr22	40637657	40637752	(10180716)	+	(ATGTAT)n	Simple_repeat	1	96	(0)	2473974
2235	12.1	0.0	0.0	chr22	40723112	40723416	(10095052)	+	AluSq	SINE/Alu	1	305	(8)	2474202
13	25.5	3.9	0.0	chr22	40723739	40723789	(10094679)	+	(GAGGAAT)n	Simple_repeat	1	53	(0)	2474203
1953	16.2	1.2	4.0	chr22	41100488	41100840	(9717628)	+	MER2	DNA/TcMar-Tigger	1	343	(2)	2475153
19	19.5	4.3	8.3	chr22	41100842	41100933	(9717535)	+	(AT)n	Simple_repeat	1	96	(0)	2475154
2045	13.4	1.3	0.0	chr22	41111531	41111836	(9706632)	C	AluSp	SINE/Alu	(1)	312	3	2475180
2454	6.9	0.0	3.1	chr22	41111839	41112187	(9706281)	C	AluY	SINE/Alu	(0)	311	1	2475181
674	20.7	2.2	15.1	chr22	41214989	41215129	(9603339)	C	MER5B	DNA/hAT-Charlie	(47)	131	1	2475405
238	30.2	15.2	6.2	chr22	41215273	41215498	(9602970)	C	MIRc	SINE/MIR	(0)	268	16	2475407
242	15.4	0.0	0.0	chr22	41215591	41215629	(9602839)	C	Charlie4z	DNA/hAT-Charlie	(31)	136	98	2475408
2305	10.3	0.0	0.0	chr22	41298313	41298614	(9519854)	C	AluSx	SINE/Alu	(10)	302	1	2475585
984	16.5	1.3	0.6	chr22	41298615	41298772	(9519696)	C	AluJo	SINE/Alu	(127)	185	27	2475586
1624	18.2	3.3	1.5	chr22	41298814	41299137	(9519331)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	34	2475587
23	20.5	1.6	4.1	chr22	41910210	41910277	(8908191)	+	G-rich	Low_complexity	1	66	(0)	2477040
2624	15.4	9.7	8.8	chr22	42054491	42054742	(8763726)	C	L1MB7	LINE/L1	(1028)	5616	5354	2477339
767	25.5	0.6	0.0	chr22	42054743	42054903	(8763565)	+	FRAM	SINE/Alu	1	162	(14)	2477343
2624	15.4	9.7	8.8	chr22	42054904	42055031	(8763437)	C	L1MB7	LINE/L1	(1291)	5353	5210	2477339
2104	10.5	2.7	1.0	chr22	42200366	42200661	(8617807)	+	AluSx	SINE/Alu	2	302	(10)	2477568
305	33.4	11.1	8.0	chr22	42200662	42200917	(8617551)	+	L2	LINE/L2	2618	2891	(528)	2477567
1979	15.9	13.6	0.0	chr22	42200935	42201304	(8617164)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2477569
2356	10.9	0.3	0.0	chr22	42564428	42564730	(8253738)	C	AluSq2	SINE/Alu	(9)	304	1	2478384
890	19.9	0.0	0.0	chr22	42564796	42564961	(8253507)	C	AluJb	SINE/Alu	(10)	302	137	2478385
15	0.0	0.0	0.0	chr22	42564968	42564984	(8253484)	+	(GT)n	Simple_repeat	1	17	(0)	2478386
500	10.3	4.9	0.0	chr22	42564985	42565062	(8253406)	C	LTR7B	LTR/ERV1	(40)	424	343	2478387
2183	3.4	0.4	0.4	chr22	42565062	42565327	(8253141)	C	7SK	RNA	(62)	269	4	2478388
2358	9.1	0.0	0.0	chr22	42565328	42565623	(8252845)	C	AluSg	SINE/Alu	(14)	296	1	2478389
51	0.0	0.0	0.0	chr22	42640351	42640396	(8178072)	+	(TTAT)n	Simple_repeat	1	46	(0)	2478552
2204	10.4	0.0	0.0	chr22	42640397	42640676	(8177792)	C	AluSg	SINE/Alu	(30)	280	1	2478553
382	26.7	6.4	1.2	chr22	42865492	42865654	(7952814)	+	L1ME4a	LINE/L1	5951	6122	(2)	2479116
33	0.0	0.0	0.0	chr22	42865811	42865841	(7952627)	+	(ACCCTA)n	Simple_repeat	1	31	(0)	2479118
13	20.1	0.0	2.8	chr22	42865958	42865993	(7952475)	+	(TTCT)n	Simple_repeat	1	36	(0)	2479119
36	13.2	0.0	1.7	chr22	44055633	44055678	(6762790)	+	(CT)n	Simple_repeat	2	47	(0)	2481283
864	24.2	10.1	2.7	chr22	44055679	44056017	(6762451)	C	MLT2B1	LTR/ERVL	(41)	526	26	2481280
782	19.7	30.0	1.0	chr22	44487243	44487544	(6330924)	C	MLT1A0	LTR/ERVL-MaLR	(8)	382	1	2482046
1926	11.3	0.0	0.0	chr22	44487572	44487819	(6330649)	+	AluSx	SINE/Alu	1	248	(64)	2482047
2300	9.1	1.0	0.0	chr22	45139276	45139572	(5678896)	+	AluSz	SINE/Alu	1	300	(12)	2483342
918	28.6	9.1	7.5	chr22	45139573	45140197	(5678271)	+	L1ME3C	LINE/L1	5495	6120	(3)	2483335
257	20.8	0.0	0.0	chr22	47049033	47049085	(3769383)	+	MER132	DNA/TcMar-Pogo	63	115	(63)	2486372
12	27.2	2.0	2.0	chr22	49771555	49771604	(1046864)	+	(GCCCC)n	Simple_repeat	1	51	(0)	2489735
12	18.6	0.0	7.1	chr22	49849115	49849156	(969312)	+	(GCCC)n	Simple_repeat	1	42	(0)	2489836
18	13.5	0.0	0.0	chr22	49849562	49849594	(968874)	+	(GAGG)n	Simple_repeat	1	33	(0)	2489837
316	21.5	1.1	5.1	chr22	49912166	49912263	(906205)	C	L1MEg	LINE/L1	(5548)	536	443	2489948
264	32.7	6.7	0.0	chr22	49912337	49912489	(905979)	C	L1MEg	LINE/L1	(5823)	261	98	2489948
2582	24.8	5.3	6.9	chr22	49982682	49982892	(835576)	+	L1MDa	LINE/L1	5128	5330	(1214)	2490020
1332	28.2	9.0	1.4	chr22	50088945	50089784	(728684)	+	L1M5	LINE/L1	3157	4092	(2054)	2490167
14	31.2	0.0	0.0	chr22	50089801	50089851	(728617)	+	(CCGC)n	Simple_repeat	1	51	(0)	2490170
17	2.6	6.4	8.0	chr22	50090013	50090059	(728409)	+	(GCGGC)n	Simple_repeat	1	50	(0)	2490171
2457	7.3	0.0	1.3	chr22	50480688	50481000	(337468)	C	AluSc8	SINE/Alu	(0)	311	3	2490730
29	22.8	4.4	5.0	chr22	50481615	50481749	(336719)	+	(CGCCCG)n	Simple_repeat	1	141	(0)	2490731
13	13.3	2.7	5.3	chr22	50530015	50530051	(288417)	+	(CGG)n	Simple_repeat	1	38	(0)	2490813
513	27.7	9.3	4.7	chr22	50538364	50538598	(279870)	C	LTR67B	LTR/ERVL	(373)	247	1	2490828
182	32.5	21.8	0.0	chr22	50538601	50538751	(279717)	C	L2	LINE/L2	(944)	2475	2283	2490829
704	5.2	1.1	2.0	chr3	10001	10916	(198284643)	+	(CTAACC)n	Simple_repeat	1	926	(0)	2492347
46	0.0	0.0	0.0	chr3	10917	10983	(198284576)	+	(CGACCC)n	Simple_repeat	1	67	(0)	2492348
1559	9.5	2.2	4.3	chr3	10988	11771	(198283788)	C	TAR1	Satellite/telo	(11)	768	1	2492349
786	14.7	10.3	0.0	chr3	8500026	8500182	(189795377)	+	L1MA4	LINE/L1	6126	6300	(0)	2505474
770	18.6	14.5	0.0	chr3	10154508	10154695	(188140864)	+	Tigger4b	DNA/TcMar-Tigger	1	220	(141)	2508779
346	11.3	6.1	0.0	chr3	10154696	10154757	(188140802)	+	MER21A	LTR/ERVL	3	68	(863)	2508780
983	14.1	0.7	0.0	chr3	10154758	10154899	(188140660)	C	AluJr4	SINE/Alu	(150)	162	20	2508781
995	14.8	15.7	1.7	chr3	10154908	10155148	(188140411)	+	MER21A	LTR/ERVL	214	489	(379)	2508780
735	15.8	5.3	2.4	chr3	10155149	10155275	(188140284)	+	FLAM_C	SINE/Alu	1	131	(12)	2508782
455	31.0	7.6	6.9	chr3	11550681	11551598	(186743961)	C	L1ME4b	LINE/L1	(845)	47	1	2511656
1941	13.5	2.3	3.3	chr3	15407016	15407318	(182888241)	C	AluSz6	SINE/Alu	(11)	301	2	2518772
316	32.7	7.1	1.3	chr3	15407324	15407481	(182888078)	+	L4_A_Mam	LINE/RTE-X	3967	4134	(856)	2518768
230	32.5	3.8	0.8	chr3	15407563	15407689	(182887870)	+	L4_B_Mam	LINE/RTE-X	4229	4359	(582)	2518773
511	27.4	18.1	3.0	chr3	15407757	15408129	(182887430)	+	L4_A_Mam	LINE/RTE-X	4523	4964	(26)	2518768
18130	10.1	7.0	0.6	chr3	25772220	25775304	(172520255)	C	L1PB1	LINE/L1	(3570)	3292	1	2533788
3374	14.7	0.6	8.6	chr3	25775306	25775989	(172519570)	+	L1MA4	LINE/L1	5662	6290	(10)	2533783
4012	9.2	0.0	4.0	chr3	48202626	48203041	(150092518)	+	MER41A	LTR/ERV1	160	554	(0)	2568929
271	15.4	5.5	0.0	chr3	48203042	48203093	(150092466)	+	PRIMA41-int	LTR/ERV1	1	55	(5891)	2568929
2306	13.0	2.6	2.6	chr3	48203125	48203332	(150092227)	+	PRIMA41-int	LTR/ERV1	1	212	(7544)	2568929
2222	7.4	3.4	0.0	chr3	49200193	49200475	(149095084)	+	AluSx	SINE/Alu	1	293	(19)	2570812
22	10.0	0.0	0.0	chr3	50118445	50118476	(148177083)	+	(GA)n	Simple_repeat	1	32	(0)	2572661
18	29.8	2.1	4.0	chr3	51392189	51392285	(146903274)	+	(CGC)n	Simple_repeat	1	99	(0)	2574238
15	0.0	0.0	0.0	chr3	51393391	51393409	(146902150)	+	(CCA)n	Simple_repeat	1	19	(0)	2574239
22	0.0	0.0	0.0	chr3	65621918	65621941	(132673618)	+	(CA)n	Simple_repeat	1	24	(0)	2597709
878	20.6	5.1	4.2	chr3	71533978	71534082	(126761477)	C	MER8	DNA/TcMar-Tigger	(0)	239	126	2607379
2169	11.9	3.5	0.3	chr3	71534083	71534384	(126761175)	+	AluSq2	SINE/Alu	2	313	(0)	2607380
1795	20.6	9.6	0.9	chr3	75608479	75610682	(122684877)	+	SATR1	Satellite	1	2396	(1)	2614490
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
2140	20.5	4.5	3.6	chr3	125686659	125693730	(72601829)	C	SATR2	Satellite	(244)	6594	1	2677543
10667	6.0	9.7	0.5	chr3	128653227	128654656	(69640903)	+	LTR12C	LTR/ERV1	3	1578	(1)	2682141
1050	21.2	12.2	3.7	chr3	128959241	128959592	(69335967)	+	HAL1	LINE/L1	1424	1809	(698)	2682763
3753	1.1	8.1	0.0	chr3	128959818	128960251	(69335308)	+	LTR7Y	LTR/ERV1	1	472	(0)	2682764
6605	12.4	4.1	2.1	chr3	129045399	129045653	(69249906)	+	L1MCa	LINE/L1	3623	3875	(2446)	2682931
1869	16.5	2.0	6.6	chr3	130030332	130034463	(68261096)	+	SATR2	Satellite	1	3941	(45)	2684899
272	19.4	1.6	1.6	chr3	131398046	131398108	(66897451)	C	MLT1K	LTR/ERVL-MaLR	(370)	225	163	2686835
653	20.0	4.9	5.9	chr3	141928901	141929086	(56366473)	+	MLT1E2	LTR/ERVL-MaLR	1	184	(443)	2703168
36145	3.7	0.4	2.0	chr3	142438293	142442703	(55852856)	+	HERV17-int	LTR/ERV1	1679	6019	(2607)	2704139
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
12	13.9	0.0	0.0	chr3	169769521	169769544	(28526015)	+	(GCC)n	Simple_repeat	1	24	(0)	2741786
2572	4.2	0.0	1.9	chr3	183429393	183429702	(14865857)	C	AluY	SINE/Alu	(7)	304	1	2762655
13	26.9	0.0	6.2	chr3	195065765	195065829	(3229730)	+	(GCGGTCG)n	Simple_repeat	1	65	(0)	2782319
28	0.0	0.0	0.0	chr3	195554350	195554376	(2741183)	+	(AAAC)n	Simple_repeat	1	27	(0)	2783254
1354	9.5	0.5	13.0	chr3	195554377	195554557	(2741002)	+	AluSq2	SINE/Alu	137	289	(24)	2783252
22	0.0	0.0	0.0	chr3	195838221	195838244	(2457315)	+	(AC)n	Simple_repeat	1	24	(0)	2783712
195	25.3	15.7	0.0	chr3	195871817	195871891	(2423668)	C	MIRb	SINE/MIR	(117)	151	63	2783780
619	16.7	3.4	1.7	chr3	196103287	196103402	(2192157)	+	L1MC3	LINE/L1	6662	6779	(1103)	2784211
324	14.5	1.6	1.6	chr3	196103726	196103788	(2191771)	+	L1MC3	LINE/L1	6719	6781	(1004)	2784211
2215	10.2	0.7	0.0	chr3	196103789	196104083	(2191476)	C	AluSc	SINE/Alu	(12)	297	1	2784224
1433	12.1	1.9	0.0	chr3	196379275	196379481	(1916078)	C	MER41B	LTR/ERV1	(423)	211	1	2784890
1418	12.8	2.3	0.0	chr3	196379482	196379692	(1915867)	C	MER41-int	LTR/ERV1	(2)	5944	5729	2784890
412	15.6	2.5	2.5	chr3	196379699	196379777	(1915782)	C	PRIMA41-int	LTR/ERV1	(7677)	79	1	2784891
331	7.5	5.4	0.0	chr3	196379811	196379863	(1915696)	C	PRIMA41-int	LTR/ERV1	(7700)	56	1	2784891
957	11.1	0.7	5.6	chr3	196379864	196379983	(1915576)	C	MER41B	LTR/ERV1	(0)	634	522	2784891
2150	10.6	0.0	0.7	chr3	196379984	196380275	(1915284)	+	AluYb8	SINE/Alu	17	306	(12)	2784892
957	11.1	0.7	5.6	chr3	196380276	196380316	(1915243)	C	MER41B	LTR/ERV1	(113)	521	481	2784891
20	20.7	0.0	2.0	chr3	196528476	196528524	(1767035)	+	A-rich	Low_complexity	1	49	(0)	2785220
1040	9.8	0.3	4.7	chr3	198172702	198174527	(121032)	+	(AGGGTT)n	Simple_repeat	1	1831	(0)	2788213
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
6226	10.8	7.7	1.4	chr4	497012	497422	(189717133)	C	PRIMA4-int	LTR/ERV1	(7824)	446	4	2789183
2436	12.0	7.7	3.2	chr4	497424	497610	(189716945)	C	MER4A1	LTR/ERV1	(0)	594	293	2789183
2238	7.1	0.3	3.5	chr4	497611	497921	(189716634)	+	AluY	SINE/Alu	5	305	(6)	2789185
17	15.7	0.0	6.2	chr4	689194	689241	(189525314)	+	G-rich	Low_complexity	1	48	(0)	2789401
671	30.3	11.2	2.6	chr4	1099171	1099632	(189114923)	+	L1MEg	LINE/L1	1555	2205	(4273)	2789858
693	29.7	15.8	1.5	chr4	1220319	1221052	(188993503)	+	L1ME3	LINE/L1	5177	6028	(913)	2790000
2267	12.0	0.0	0.0	chr4	1651250	1651549	(188563006)	+	AluSq	SINE/Alu	1	300	(13)	2790411
16671	8.4	1.8	1.7	chr4	2000001	2001620	(188212935)	+	L1PA8A	LINE/L1	2867	4492	(1654)	2790925
984	25.6	9.7	4.8	chr4	6345328	6345787	(183868768)	+	MLT1D	LTR/ERVL-MaLR	1	485	(20)	2798194
201	36.6	2.4	0.0	chr4	6345903	6345984	(183868571)	+	L2a	LINE/L2	2388	2471	(948)	2798195
1765	22.4	5.2	3.0	chr4	9755875	9759946	(180454609)	C	SATR2	Satellite	(231)	4164	1	2803574
4296	21.9	4.1	7.8	chr4	31286571	31287946	(158926609)	C	Looper	DNA/PiggyBac	(234)	1323	1	2837898
2292	11.2	0.0	1.0	chr4	31288006	31288337	(158926218)	+	AluSc8	SINE/Alu	1	311	(0)	2837901
2495	6.5	0.3	0.0	chr4	39815145	39815478	(150399077)	C	AluY	SINE/Alu	(0)	311	1	2850543
2263	7.9	0.7	0.0	chr4	39815879	39816157	(150398398)	+	AluY	SINE/Alu	1	281	(30)	2850544
36	12.4	1.3	3.9	chr4	41880959	41881034	(148333521)	+	(TTCCC)n	Simple_repeat	1	77	(0)	2854762
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
2364	19.6	5.0	4.4	chr4	49493900	49494948	(140719607)	+	L1MB8	LINE/L1	4777	5836	(342)	2865154
2241	13.0	7.3	0.5	chr4	49494958	49495361	(140719194)	+	MER61C	LTR/ERV1	11	428	(0)	2865155
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
182	32.1	7.8	1.9	chr4	56387059	56387166	(133827389)	C	MIRc	SINE/MIR	(34)	234	120	2872523
41	30.5	3.5	3.4	chr4	56505866	56506094	(133708461)	+	A-rich	Low_complexity	1	237	(0)	2872718
204	28.9	0.0	7.8	chr4	56655346	56655435	(133559120)	+	MIR3	SINE/MIR	110	192	(16)	2873016
2226	8.9	1.0	1.6	chr4	82420451	82420754	(107793801)	C	AluSg	SINE/Alu	(7)	303	2	2907596
2203	10.8	0.0	4.0	chr4	82420918	82421240	(107793315)	+	AluSq	SINE/Alu	2	311	(2)	2907597
16	9.3	0.0	0.0	chr4	102500176	102500198	(87714357)	+	(T)n	Simple_repeat	1	23	(0)	2935759
185	27.5	0.0	0.0	chr4	110629352	110629391	(79585164)	+	L2b	LINE/L2	3334	3373	(2)	2946878
366	28.9	4.2	0.0	chr4	112522423	112522536	(77692019)	C	L2b	LINE/L2	(1)	3374	3256	2949290
1833	13.7	3.4	4.1	chr4	112522562	112522854	(77691701)	+	AluJb	SINE/Alu	1	291	(21)	2949291
229	21.1	6.2	2.6	chr4	123428019	123428096	(66786459)	+	Charlie4z	DNA/hAT-Charlie	21	101	(66)	2963952
20	0.0	0.0	0.0	chr4	123428197	123428218	(66786337)	+	(T)n	Simple_repeat	1	22	(0)	2963953
350	30.5	3.8	3.8	chr4	123428266	123428398	(66786157)	C	LFSINE_Vert	SINE/tRNA	(263)	196	64	2963954
191	33.4	13.3	3.5	chr4	128161610	128161944	(62052611)	+	L2a	LINE/L2	2986	3416	(10)	2970300
772	30.5	12.1	7.1	chr4	139684471	139685184	(50529371)	C	HAL1	LINE/L1	(1628)	879	126	2985105
1823	10.0	0.0	0.4	chr4	139685188	139685427	(50529128)	C	7SK	RNA	(92)	239	1	2985112
421	26.5	5.6	2.2	chr4	139685434	139685572	(50528983)	C	HAL1	LINE/L1	(2363)	144	1	2985105
235	26.4	8.4	0.0	chr4	186035420	186035506	(4179049)	C	Charlie23a	DNA/hAT-Charlie	(238)	101	7	3049103
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
543	5.4	1.2	0.9	chr4	190122449	190123118	(91437)	+	(AGGGTT)n	Simple_repeat	1	678	(0)	3054644
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
29	2.6	0.0	2.4	chr5	11838	11879	(181526380)	+	(GACCCC)n	Simple_repeat	1	42	(0)	3054966
7973	10.4	3.5	1.2	chr5	11943	13334	(181524925)	C	TAR1	Satellite/telo	(43)	2068	644	3054967
183	28.9	6.2	4.0	chr5	320528	320653	(181217606)	C	L2a	LINE/L2	(339)	3087	2959	3055308
1048	12.3	0.7	0.0	chr5	507406	507560	(181030699)	C	AluJb	SINE/Alu	(152)	160	5	3055473
16	0.0	0.0	0.0	chr5	523605	523622	(181014637)	+	(A)n	Simple_repeat	1	18	(0)	3055485
3051	15.8	5.2	9.8	chr5	777029	778057	(180760202)	C	LTR12D	LTR/ERV1	(0)	1254	2	3055684
13	21.2	2.6	0.0	chr5	1295520	1295557	(180242702)	+	G-rich	Low_complexity	1	39	(0)	3056108
1234	20.5	3.4	1.5	chr5	4865939	4866200	(176672059)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	99	3059882
6530	17.7	2.9	5.4	chr5	14141049	14142479	(167395780)	C	L1MC3	LINE/L1	(2)	7783	6390	3071856
1581	15.7	4.0	5.7	chr5	34182319	34182469	(147355790)	+	AluJo	SINE/Alu	126	275	(37)	3099474
53	0.0	2.0	0.0	chr5	34182475	34182525	(147355734)	+	(AAAT)n	Simple_repeat	1	52	(0)	3099476
304	28.7	9.6	6.2	chr5	66150064	66150193	(115388066)	C	MLT1M	LTR/ERVL-MaLR	(410)	262	128	3139030
245	30.0	8.6	6.4	chr5	66150256	66150426	(115387833)	C	L2c	LINE/L2	(177)	3210	3036	3139031
398	33.6	8.4	2.7	chr5	66150528	66150784	(115387475)	C	L2c	LINE/L2	(586)	2833	2561	3139031
843	30.4	3.4	9.0	chr5	96250185	96250715	(85287544)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	9	3182326
48	6.0	1.4	2.7	chr5	96250954	96251027	(85287232)	+	(AGGTACAG)n	Simple_repeat	1	75	(0)	3182327
548	26.6	6.7	2.7	chr5	96563401	96563659	(84974600)	+	L1ME4b	LINE/L1	615	884	(8)	3182739
520	30.3	18.9	2.0	chr5	96563804	96564355	(84973904)	C	MamGypsy2-I	LTR/Gypsy	(3339)	827	161	3182741
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
2049	8.8	8.7	0.4	chr5	109606028	109606300	(71931959)	+	AluSx	SINE/Alu	1	298	(14)	3199220
5940	23.3	8.2	1.0	chr5	109606301	109607860	(71930399)	+	L1MEc	LINE/L1	310	2026	(4389)	3199219
2393	13.3	0.3	0.0	chr5	118970145	118970452	(62567807)	+	AluSz6	SINE/Alu	1	309	(3)	3211578
12403	10.8	1.4	0.6	chr5	118970453	118972882	(62565377)	+	L1PA10	LINE/L1	1763	4212	(2249)	3211577
2122	12.0	1.3	3.2	chr5	125350545	125350860	(56187399)	+	AluSz	SINE/Alu	1	310	(2)	3219940
1544	13.6	1.7	0.4	chr5	125350895	125351131	(56187128)	C	7SK	RNA	(91)	240	1	3219941
415	12.3	0.0	4.4	chr5	126741351	126741418	(54796841)	C	LTR9	LTR/ERV1	(547)	65	1	3221860
1288	12.8	1.5	0.0	chr5	126741419	126741614	(54796645)	C	HUERS-P3-int	LTR/ERV1	(1)	8918	8720	3221860
268	6.1	0.0	0.0	chr5	126741665	126741697	(54796562)	C	HUERS-P3-int	LTR/ERV1	(8872)	47	15	3221862
1236	11.2	1.6	1.1	chr5	126741713	126741893	(54796366)	C	LTR9	LTR/ERV1	(0)	612	431	3221862
2129	10.4	0.3	1.7	chr5	126784015	126784328	(54753931)	C	AluSp	SINE/Alu	(0)	313	1	3221972
14913	14.0	0.9	2.3	chr5	129578465	129582559	(51955700)	C	L1PA7	LINE/L1	(15)	6312	2357	3225511
250	22.2	12.9	1.2	chr5	134080625	134080706	(47457553)	C	MIRb	SINE/MIR	(0)	268	176	3231908
233	24.2	0.0	1.6	chr5	134080751	134080813	(47457446)	C	L1MA9	LINE/L1	(1)	6311	6250	3231909
978	14.1	0.0	0.0	chr5	134577546	134577687	(46960572)	+	AluJb	SINE/Alu	138	279	(33)	3232839
370	30.0	17.1	0.6	chr5	138532307	138532487	(43005772)	+	MIRb	SINE/MIR	41	257	(11)	3239053
331	27.5	8.8	0.0	chr5	139332998	139333118	(42205141)	C	MER5A	DNA/hAT-Charlie	(5)	184	53	3240561
858	15.9	4.9	4.9	chr5	139333109	139333293	(42204966)	C	7SK	RNA	(93)	238	54	3240562
729	8.4	11.9	0.0	chr5	139333294	139333412	(42204847)	C	AluSx	SINE/Alu	(177)	135	1	3240563
244	22.9	9.0	0.0	chr5	139333415	139333475	(42204784)	C	MER5A	DNA/hAT-Charlie	(117)	72	6	3240564
396	29.6	4.4	1.9	chr5	150403926	150404080	(31134179)	+	L3	LINE/CR1	3924	4082	(17)	3259851
284	31.9	5.0	0.0	chr5	150404110	150404216	(31134043)	C	MIR3	SINE/MIR	(59)	149	37	3259852
19	13.3	7.5	3.5	chr5	150404519	150404571	(31133688)	+	GA-rich	Low_complexity	1	57	(0)	3259853
13	12.7	0.0	0.0	chr5	150405324	150405349	(31132910)	+	(GAGGG)n	Simple_repeat	1	26	(0)	3259854
302	30.4	4.9	6.9	chr5	170743771	170743915	(10794344)	C	MIR	SINE/MIR	(1)	261	120	3294226
12	19.0	7.1	0.0	chr5	170744230	170744271	(10793988)	+	(GGATG)n	Simple_repeat	1	45	(0)	3294227
848	12.0	3.1	0.8	chr5	170869325	170869449	(10668810)	C	FLAM_A	SINE/Alu	(10)	132	5	3294444
1309	22.4	4.3	4.8	chr5	170869465	170869862	(10668397)	C	MLT1C	LTR/ERVL-MaLR	(71)	396	1	3294445
382	33.0	13.6	1.8	chr5	173231754	173231987	(8306272)	+	MIRb	SINE/MIR	3	262	(0)	3299233
2359	9.2	0.0	0.0	chr5	176446618	176446920	(5091339)	C	AluSz	SINE/Alu	(9)	303	1	3305278
301	24.1	11.8	0.9	chr5	176447484	176447596	(5090663)	C	MIR3	SINE/MIR	(63)	145	19	3305279
2105	10.8	0.0	7.5	chr5	177634010	177634314	(3903945)	C	AluSx	SINE/Alu	(28)	284	3	3307765
199	34.1	5.8	8.9	chr5	177634335	177634514	(3903745)	+	L2c	LINE/L2	3013	3186	(189)	3307766
689	20.2	3.0	1.2	chr5	177634564	177634728	(3903531)	C	L1M4a1	LINE/L1	(1746)	4400	4233	3307767
18	28.8	7.5	0.0	chr5	177782592	177782697	(3755562)	+	(CCCCAAC)n	Simple_repeat	1	114	(0)	3307982
2255	4.7	5.8	0.4	chr5	178200838	178201114	(3337145)	C	AluY	SINE/Alu	(18)	293	1	3308782
200	33.3	0.0	0.0	chr5	178201144	178201212	(3337047)	C	MIRc	SINE/MIR	(12)	256	188	3308783
1914	16.4	0.0	0.7	chr5	178201216	178201525	(3336734)	C	AluSz6	SINE/Alu	(3)	309	2	3308784
319	31.0	13.7	0.0	chr5	178201685	178201797	(3336462)	+	MIRc	SINE/MIR	121	251	(17)	3308785
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2111	7.9	4.1	2.8	chr5	178729557	178729846	(2808413)	C	AluSx1	SINE/Alu	(18)	294	1	3309713
2516	4.1	0.3	0.7	chr5	178729873	178730164	(2808095)	C	AluY	SINE/Alu	(20)	291	1	3309714
255	22.2	9.2	5.7	chr5	179060941	179061058	(2477201)	+	MIR3	SINE/MIR	37	163	(67)	3310304
2543	3.6	0.0	0.7	chr5	179632025	179632333	(1905926)	+	AluYa5	SINE/Alu	1	307	(4)	3311229
308	2.1	0.0	2.0	chr5	179632755	179632803	(1905456)	C	AluY	SINE/Alu	(0)	301	254	3311230
1132	10.2	3.2	3.2	chr5	179632804	179632851	(1905408)	C	AluSx1	SINE/Alu	(126)	186	137	3311231
1991	10.1	0.0	0.4	chr5	179632852	179633154	(1905105)	C	AluSc	SINE/Alu	(0)	309	3	3311232
2163	6.4	6.3	0.0	chr5	179697629	179697909	(1840350)	+	AluSx1	SINE/Alu	5	304	(8)	3311401
547	23.2	0.8	0.8	chr5	179698083	179698208	(1840051)	+	MamRep4096	DNA/hAT-Tip100	1	126	(300)	3311402
1700	17.3	4.1	0.6	chr5	180072515	180072840	(1465419)	C	MER1B	DNA/hAT-Charlie	(1)	338	1	3312027
2436	6.7	1.6	0.0	chr5	180073267	180073565	(1464694)	+	AluSx3	SINE/Alu	1	304	(7)	3312028
3875	16.8	9.2	0.2	chr5	180721508	180722775	(815484)	+	L1MA8	LINE/L1	4903	6290	(1)	3313147
253	13.3	0.0	0.0	chr5	180722797	180722841	(815418)	C	L1MA5A	LINE/L1	(8)	6289	6245	3313148
253	13.3	0.0	0.0	chr5	180722897	180722941	(815318)	C	L1MA5A	LINE/L1	(8)	6289	6245	3313149
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
2147	7.8	1.8	0.0	chr5	181174491	181174758	(363501)	C	AluSg	SINE/Alu	(37)	273	1	3313786
230	4.5	1.1	4.8	chr6	147636	147986	(170657993)	+	(CTAACC)n	Simple_repeat	1	355	(0)	3314431
2053	19.6	3.8	1.5	chr6	147987	149049	(170656930)	C	TAR1	Satellite/telo	(237)	1087	1	3314432
26	22.4	3.7	4.5	chr6	3053779	3053885	(167752094)	+	(CGCCA)n	Simple_repeat	1	111	(0)	3318323
302	28.1	14.3	4.0	chr6	3438559	3438858	(167367121)	C	MamRep434	DNA/TcMar-Tigger	(3)	423	88	3318888
938	15.9	1.9	8.4	chr6	3439080	3439306	(167366673)	C	MER20	DNA/hAT-Charlie	(0)	219	8	3318889
227	14.7	0.0	0.0	chr6	3439344	3439377	(167366602)	C	LTR104_Mam	LTR/Gypsy	(130)	1379	1346	3318890
272	25.7	12.4	1.9	chr6	4792846	4793238	(166012741)	C	L1M5	LINE/L1	(1156)	4990	4563	3321076
207	30.3	42.7	6.8	chr6	4793239	4793416	(166012563)	C	L2a	LINE/L2	(59)	3367	3126	3321078
2879	22.0	2.5	2.5	chr6	10496588	10497271	(160308708)	C	L1MD3	LINE/L1	(0)	7995	7312	3329600
685	26.7	3.9	0.0	chr6	16326073	16326267	(154479712)	C	MER105	DNA/hAT-Charlie	(0)	203	1	3339345
18	4.5	0.0	0.0	chr6	24358126	24358148	(146447831)	+	(AC)n	Simple_repeat	1	23	(0)	3351756
1710	10.9	11.9	1.1	chr6	26104525	26104800	(144701179)	+	AluSz	SINE/Alu	2	311	(1)	3354639
2294	8.1	1.0	0.0	chr6	26104997	26105291	(144700688)	+	AluSg7	SINE/Alu	3	300	(9)	3354640
391	28.8	0.9	0.9	chr6	26304759	26304863	(144501116)	+	SVA_E	Retroposon/SVA	207	311	(1071)	3354978
725	16.5	0.0	0.0	chr6	26304774	26304882	(144501097)	C	FLAM_C	SINE/Alu	(34)	109	1	3354979
210	31.3	0.0	4.8	chr6	26305006	26305109	(144500870)	C	MER5B	DNA/hAT-Charlie	(63)	115	17	3354980
671	1.2	0.0	2.4	chr6	26305489	26305570	(144500409)	C	tRNA-Ser-AGY	tRNA	(2)	83	4	3354981
1220	16.2	6.7	4.3	chr6	27547300	27547533	(143258446)	+	AluJb	SINE/Alu	1	240	(72)	3357092
247	15.0	0.0	0.0	chr6	27547588	27547627	(143258352)	+	U2	snRNA	1	40	(148)	3357093
678	1.4	0.0	0.0	chr6	27547752	27547823	(143258156)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3357094
754	2.4	0.0	0.0	chr6	27553413	27553494	(143252485)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3357102
15	9.0	12.2	1.8	chr6	27553496	27553544	(143252435)	+	(GACAT)n	Simple_repeat	1	55	(0)	3357103
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
239	9.3	0.0	0.0	chr6	28794140	28794182	(142011797)	C	Alu	SINE/Alu	(0)	301	259	3359234
8346	13.3	7.8	2.8	chr6	29014953	29016447	(141789532)	+	LTR12C	LTR/ERV1	4	1579	(0)	3359638
2194	12.1	0.0	1.6	chr6	30697525	30697837	(140108142)	C	AluSx1	SINE/Alu	(4)	308	1	3362040
2488	3.5	1.4	0.0	chr6	31498447	31498766	(139307213)	C	AluY	SINE/Alu	(0)	311	1	3363412
242	25.9	13.5	9.8	chr6	31739151	31739254	(139066725)	+	L2c	LINE/L2	3289	3426	(0)	3363799
283	20.6	0.0	2.9	chr6	31739518	31739587	(139066392)	C	MIR	SINE/MIR	(6)	256	189	3363801
2022	10.5	1.4	0.4	chr6	31841407	31841682	(138964297)	C	AluSx4	SINE/Alu	(30)	280	2	3363998
2112	7.9	4.6	0.7	chr6	31841684	31841974	(138964005)	C	AluY	SINE/Alu	(8)	303	1	3363999
1850	12.1	4.4	2.1	chr6	31841975	31842263	(138963716)	C	AluSp	SINE/Alu	(17)	296	1	3364000
1685	10.6	4.8	11.9	chr6	31842352	31842482	(138963497)	+	AluSx	SINE/Alu	1	133	(179)	3364001
2279	4.8	0.4	0.0	chr6	31842483	31842751	(138963228)	+	AluY	SINE/Alu	14	283	(28)	3364002
356	30.6	10.5	5.3	chr6	33299810	33300131	(137505848)	C	L2b	LINE/L2	(7)	3380	3080	3366146
595	28.7	2.1	6.5	chr6	33300275	33300380	(137505599)	+	Charlie1	DNA/hAT-Charlie	5	99	(2682)	3366147
212	35.8	9.6	0.8	chr6	34115718	34115841	(136690138)	+	MIR3	SINE/MIR	8	143	(65)	3367661
505	27.3	14.4	8.8	chr6	36860674	36861359	(133944620)	C	L1ME3Cz	LINE/L1	(182)	815	85	3373453
536	21.8	1.0	0.0	chr6	36861394	36861494	(133944485)	C	MER8	DNA/TcMar-Tigger	(0)	239	138	3373454
234	19.1	0.0	0.0	chr6	36861494	36861535	(133944444)	C	MER8	DNA/TcMar-Tigger	(196)	43	2	3373454
384	26.4	10.6	0.7	chr6	36861536	36861680	(133944299)	C	L1ME4a	LINE/L1	(875)	5271	5111	3373443
19	0.0	0.0	0.0	chr6	41548825	41548845	(129257134)	+	(T)n	Simple_repeat	1	21	(0)	3381377
401	26.6	18.8	2.3	chr6	42049337	42049505	(128756474)	C	MIRb	SINE/MIR	(14)	254	49	3382423
187	36.0	1.1	3.4	chr6	42049689	42049777	(128756202)	+	MIR1_Amn	SINE/MIR	23	109	(121)	3382424
247	34.2	0.9	0.9	chr6	42049792	42049903	(128756076)	C	MER5A	DNA/hAT-Charlie	(0)	189	78	3382425
2512	4.8	17.1	1.3	chr6	43370198	43370576	(127435403)	+	LTR7B	LTR/ERV1	1	451	(13)	3385202
2255	10.4	0.3	0.0	chr6	44243052	44243349	(126562630)	+	AluSx1	SINE/Alu	1	299	(13)	3386847
1282	23.1	7.1	3.4	chr6	44243350	44243522	(126562457)	C	MER58B	DNA/hAT-Charlie	(165)	176	1	3386846
2392	9.0	0.3	0.6	chr6	44243648	44243958	(126562021)	C	AluSp	SINE/Alu	(3)	310	1	3386848
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
180	16.9	10.6	4.8	chr6	108118998	108119059	(62686920)	C	L3	LINE/CR1	(2846)	1253	1188	3469990
9190	5.9	13.1	4.9	chr6	112688514	112689954	(58116025)	C	LTR12C	LTR/ERV1	(0)	1579	3	3477444
2365	9.6	0.0	0.3	chr6	113962683	113962984	(56842995)	+	AluSc8	SINE/Alu	2	302	(9)	3479407
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
26	16.5	1.3	6.4	chr6	120952863	120952872	(49853107)	+	(TAGATA)n	Simple_repeat	1	10	(0)	3488382
3972	14.1	10.9	1.2	chr6	120952873	120953610	(49852369)	C	LTR1B1	LTR/ERV1	(0)	818	1	3488383
593	14.0	0.0	0.9	chr6	130985843	130985957	(39820022)	C	L1MB8	LINE/L1	(37)	6141	6028	3501645
1367	19.7	4.7	0.9	chr6	130985949	130986296	(39819683)	+	L1M4	LINE/L1	3614	3975	(2171)	3501646
1111	17.7	0.8	0.0	chr6	130986273	130986515	(39819464)	+	L1M4	LINE/L1	5319	5563	(617)	3501646
1625	19.8	0.7	2.9	chr6	142021787	142022099	(28783880)	+	AluJb	SINE/Alu	5	310	(2)	3517963
12	17.4	1.6	10.8	chr6	142022122	142022133	(28783846)	+	(AAGATC)n	Simple_repeat	1	63	(0)	3517964
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
399	20.1	0.0	8.1	chr6	151292428	151292513	(19513466)	C	MER2	DNA/TcMar-Tigger	(0)	345	162	3531743
299	21.9	1.5	0.0	chr6	151292514	151292577	(19513402)	+	MER2	DNA/TcMar-Tigger	1	65	(280)	3531744
313	25.0	1.1	5.4	chr6	151292552	151292644	(19513335)	+	MER8	DNA/TcMar-Tigger	61	149	(90)	3531745
495	15.6	4.4	12.8	chr6	151399413	151399513	(19406466)	+	MER81	DNA/hAT-Blackjack	1	95	(19)	3531929
1901	14.5	4.0	0.0	chr6	151399514	151399803	(19406176)	+	AluSg	SINE/Alu	1	302	(8)	3531930
672	29.7	4.5	0.5	chr6	153093779	153093991	(17711988)	+	MIRc	SINE/MIR	6	227	(41)	3534432
210	34.3	11.9	6.0	chr6	166992239	166992671	(3813308)	+	L2b	LINE/L2	2655	3138	(237)	3553883
593	28.9	6.9	4.5	chr6	166992673	166992940	(3813039)	C	LTR16C	LTR/ERVL	(214)	275	1	3553884
794	20.1	10.1	17.7	chr6	166993000	166993259	(3812720)	+	MER8	DNA/TcMar-Tigger	2	239	(0)	3553885
279	24.8	10.2	5.1	chr6	166993265	166993421	(3812558)	+	L1M7	LINE/L1	1741	1906	(4312)	3553886
14	22.3	0.0	8.8	chr6	168319432	168319499	(2486480)	+	G-rich	Low_complexity	1	68	(0)	3555361
15	0.0	0.0	0.0	chr6	169814671	169814687	(991292)	+	(TG)n	Simple_repeat	1	17	(0)	3556876
245	32.7	17.5	0.6	chr6	169898837	169898993	(906986)	+	L3	LINE/CR1	3779	3967	(132)	3556956
18	10.5	0.0	0.0	chr6	169899069	169899099	(906880)	+	(CGCCC)n	Simple_repeat	1	31	(0)	3556957
447	31.1	5.6	0.5	chr6	169900115	169902415	(903564)	+	G-rich	Low_complexity	1	2429	(0)	3556958
218	28.3	5.7	2.9	chr6	170136802	170136903	(669076)	+	MER5A	DNA/hAT-Charlie	4	108	(81)	3557179
12	19.0	7.1	0.0	chr6	170137036	170137077	(668902)	+	(GAGCCG)n	Simple_repeat	1	45	(0)	3557180
2317	9.8	0.0	0.0	chr6	170220948	170221244	(584735)	C	AluSx3	SINE/Alu	(14)	297	1	3557233
11	21.2	0.0	2.9	chr6	170221340	170221374	(584605)	+	G-rich	Low_complexity	1	35	(0)	3557234
322	32.8	3.8	0.6	chr6	170221934	170222114	(583865)	+	MER5A	DNA/hAT-Charlie	3	189	(0)	3557235
264	26.8	12.8	4.7	chr6	170222143	170222271	(583708)	C	MER5B	DNA/hAT-Charlie	(29)	149	9	3557236
360	7.3	0.0	0.0	chr6	170222432	170222486	(583493)	+	L1MB4	LINE/L1	6126	6180	(0)	3557237
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
227	0.4	5.0	0.0	chr7	10001	10241	(159335732)	+	(CTAACC)n	Simple_repeat	1	253	(0)	3557857
248	26.5	12.7	1.7	chr7	244401	244519	(159101454)	+	MER102b	DNA/hAT-Charlie	22	155	(186)	3558100
13	11.1	3.2	3.1	chr7	712293	712323	(158633650)	+	(GCCCC)n	Simple_repeat	1	32	(0)	3558779
18	16.6	2.0	3.9	chr7	712420	712470	(158633503)	+	G-rich	Low_complexity	1	52	(0)	3558780
950	23.6	7.2	1.8	chr7	795458	795733	(158550240)	+	Zaphod3	DNA/hAT-Tip100	76	367	(2256)	3558894
1738	17.9	3.2	0.7	chr7	846731	847032	(158498941)	+	AluJo	SINE/Alu	2	311	(1)	3558994
186	24.3	0.0	0.0	chr7	912030	912066	(158433907)	C	MIR1_Amn	SINE/MIR	(71)	159	123	3559044
184	25.2	0.0	1.3	chr7	932585	932644	(158413329)	C	MIRb	SINE/MIR	(42)	166	109	3559076
804	15.2	0.7	8.6	chr7	932915	932990	(158412983)	C	AluJo	SINE/Alu	(36)	276	212	3559077
456	23.9	14.7	0.0	chr7	963691	963899	(158382074)	+	MLT1D	LTR/ERVL-MaLR	1	245	(260)	3559124
314	27.0	11.7	0.0	chr7	964142	964199	(158381774)	+	MLT1D	LTR/ERVL-MaLR	326	392	(113)	3559124
1823	14.8	0.0	4.4	chr7	964200	964497	(158381476)	C	AluJb	SINE/Alu	(27)	285	1	3559125
1984	22.9	6.9	0.5	chr7	966690	967191	(158378782)	+	Tigger7	DNA/TcMar-Tigger	10	546	(1945)	3559129
353	24.2	5.7	0.0	chr7	967185	967283	(158378690)	+	Tigger7	DNA/TcMar-Tigger	2363	2467	(24)	3559130
331	21.5	15.8	0.0	chr7	967358	967464	(158378509)	C	L1MC4	LINE/L1	(1389)	6493	6367	3559126
2103	25.2	10.4	10.7	chr7	1033574	1034586	(158311387)	+	L1MC1	LINE/L1	3849	4827	(1319)	3559197
318	36.0	4.0	0.8	chr7	2059788	2060031	(157285942)	+	L1ME3A	LINE/L1	4285	4536	(1610)	3560765
214	34.2	0.0	5.0	chr7	2077331	2077410	(157268563)	C	MIRc	SINE/MIR	(102)	160	85	3560778
2249	8.8	0.3	2.3	chr7	2395885	2396191	(156949782)	+	AluSx1	SINE/Alu	12	312	(0)	3561312
280	29.3	0.0	0.0	chr7	2396216	2396290	(156949683)	C	MLT1G3	LTR/ERVL-MaLR	(534)	76	2	3561301
188	20.5	0.0	0.0	chr7	2396293	2396331	(156949642)	C	MIR1_Amn	SINE/MIR	(78)	152	114	3561313
302	23.2	11.8	0.0	chr7	2396662	2396743	(156949230)	+	AluSx	SINE/Alu	101	193	(119)	3561314
2337	10.3	0.0	1.0	chr7	2908814	2909125	(156436848)	C	AluSx1	SINE/Alu	(3)	309	1	3562268
372	33.7	3.7	0.5	chr7	2909126	2909250	(156436723)	+	L2	LINE/L2	2577	2702	(717)	3562267
2432	11.0	0.0	0.0	chr7	4704169	4704478	(154641495)	+	AluSz	SINE/Alu	1	310	(2)	3565430
184	24.6	17.9	0.0	chr7	4884223	4884291	(154461682)	+	L2a	LINE/L2	2761	2844	(575)	3565694
226	12.5	7.0	0.0	chr7	4884572	4884611	(154461362)	C	L2b	LINE/L2	(12)	3363	3321	3565695
305	23.5	7.6	1.2	chr7	4884578	4884663	(154461310)	C	MIRb	SINE/MIR	(14)	254	163	3565696
1049	18.3	2.4	9.1	chr7	4884666	4884874	(154461099)	+	LTR45C	LTR/ERV1	294	498	(41)	3565697
1190	28.7	5.7	9.0	chr7	5019252	5019743	(154326230)	+	MER21C	LTR/ERVL	126	600	(338)	3566068
2156	11.7	2.2	0.7	chr7	5019744	5020050	(154325923)	+	AluSx	SINE/Alu	1	312	(0)	3566069
17	16.5	7.1	1.7	chr7	5388801	5388856	(153957117)	+	G-rich	Low_complexity	1	60	(0)	3566907
2113	12.2	1.0	0.3	chr7	5389450	5389751	(153956222)	C	AluSx	SINE/Alu	(8)	304	1	3566908
421	12.8	6.5	0.0	chr7	5401620	5401705	(153944268)	C	MER58A	DNA/hAT-Charlie	(105)	119	28	3566939
16	8.5	0.0	0.0	chr7	6623095	6623119	(152722854)	+	(CAT)n	Simple_repeat	1	25	(0)	3569831
12	16.6	2.8	2.7	chr7	6653466	6653501	(152692472)	+	(CGGCGCC)n	Simple_repeat	1	37	(0)	3569886
276	32.6	1.1	0.0	chr7	7641395	7641480	(151704493)	+	MIR3	SINE/MIR	105	191	(17)	3571368
528	23.4	5.4	1.8	chr7	23965856	23966023	(135379950)	+	MER5B	DNA/hAT-Charlie	1	184	(5)	3593203
485	20.6	9.6	10.1	chr7	44874889	44875066	(114470907)	C	MER5B	DNA/hAT-Charlie	(0)	178	2	3625077
976	17.5	9.5	0.5	chr7	44875263	44875463	(114470510)	+	Charlie1	DNA/hAT-Charlie	2	222	(2559)	3625078
335	25.0	9.8	1.3	chr7	44875438	44875485	(114470488)	+	Charlie1a	DNA/hAT-Charlie	1274	1330	(125)	3625079
2178	10.0	1.7	0.3	chr7	44875486	44875775	(114470198)	+	AluSc	SINE/Alu	1	294	(15)	3625080
335	25.0	9.8	1.3	chr7	44875776	44875876	(114470097)	+	Charlie1a	DNA/hAT-Charlie	1331	1436	(19)	3625079
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
11167	11.8	10.8	0.7	chr7	66935844	66937699	(92408274)	C	L1M1	LINE/L1	(1774)	5791	3711	3651146
10258	20.2	7.0	0.9	chr7	73243184	73245112	(86100861)	C	Charlie8	DNA/hAT-Charlie	(238)	2190	124	3664174
454	20.2	1.1	0.0	chr7	73532636	73532724	(85813249)	+	MER8	DNA/TcMar-Tigger	150	239	(0)	3664836
1808	11.2	10.2	1.8	chr7	73532738	73533014	(85812959)	C	AluSz	SINE/Alu	(9)	303	1	3664837
2544	12.4	1.8	23.7	chr7	74684869	74685234	(84660739)	C	MER51A	LTR/ERV1	(82)	552	230	3667760
2181	11.6	0.0	0.4	chr7	74685235	74685511	(84660462)	+	AluSx1	SINE/Alu	22	297	(15)	3667761
21	9.5	0.0	0.0	chr7	78020089	78020122	(81325851)	+	(CCACCC)n	Simple_repeat	1	34	(0)	3674884
1089	8.1	19.1	1.6	chr7	78020484	78020672	(81325301)	C	MER30	DNA/hAT-Charlie	(0)	230	1	3674885
200	22.9	13.5	6.7	chr7	87933441	87933529	(71412444)	+	L3	LINE/CR1	3896	3991	(108)	3687837
219	36.1	15.1	1.5	chr7	87933596	87933800	(71412173)	+	L2b	LINE/L2	3132	3369	(6)	3687845
1613	14.8	11.2	0.4	chr7	97872819	97873081	(61472892)	+	AluJr	SINE/Alu	1	295	(17)	3701404
594	25.4	7.6	5.3	chr7	97873117	97873399	(61472574)	C	Charlie23a	DNA/hAT-Charlie	(0)	339	50	3701405
972	21.2	9.6	16.7	chr7	98492353	98492427	(60853546)	+	MLT1A0	LTR/ERVL-MaLR	297	365	(0)	3702733
1948	14.5	0.0	0.3	chr7	98862488	98862798	(60483175)	C	AluSx1	SINE/Alu	(0)	312	2	3703595
803	27.8	6.0	6.0	chr7	99468237	99468584	(59877389)	C	LSU-rRNA_Hsa	rRNA	(4615)	420	73	3704792
1911	16.3	1.7	0.0	chr7	100859435	100859728	(58486245)	+	AluJo	SINE/Alu	2	300	(12)	3707533
16	10.3	0.0	5.6	chr7	101180045	101180080	(58165893)	+	(GCCGGA)n	Simple_repeat	1	36	(0)	3708166
15	21.5	2.2	2.2	chr7	101180498	101180542	(58165431)	+	(TGG)n	Simple_repeat	1	46	(0)	3708167
700	29.2	7.1	11.1	chr7	102262890	102263011	(57082962)	C	L2a	LINE/L2	(108)	3318	3190	3710615
300	25.4	16.4	5.4	chr7	103141971	103142099	(56203874)	+	MER5B	DNA/hAT-Charlie	33	178	(0)	3712281
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
336	24.1	0.9	4.3	chr7	128788388	128788504	(30557469)	+	L1ME3Cz	LINE/L1	880	992	(5)	3747975
4294	6.7	3.2	0.0	chr7	128895518	128896053	(30449920)	+	MER41A	LTR/ERV1	1	554	(0)	3748111
290	9.2	25.5	1.3	chr7	128896054	128896130	(30449843)	+	PABL_A-int	LTR/ERV1	1	102	(5844)	3748111
3124	14.3	7.1	2.0	chr7	128896140	128896608	(30449365)	+	PABL_A-int	LTR/ERV1	1	494	(5452)	3748111
4421	5.5	1.6	1.1	chr7	139001188	139001738	(20344235)	+	MER41A	LTR/ERV1	1	554	(0)	3764713
291	13.5	5.5	0.0	chr7	139001739	139001790	(20344183)	+	MER41-int	LTR/ERV1	1	55	(5891)	3764713
4240	12.6	3.3	4.4	chr7	139001824	139002530	(20343443)	+	MER41-int	LTR/ERV1	1	609	(5337)	3764713
216	29.3	0.0	0.0	chr7	139109883	139109940	(20236033)	C	MIRb	SINE/MIR	(79)	189	132	3764943
1669	14.3	9.4	4.1	chr7	140446466	140446785	(18899188)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3767468
3406	15.2	2.3	6.3	chr7	140446786	140447101	(18898872)	+	L1MB7	LINE/L1	5800	6090	(94)	3767467
182	25.9	11.5	1.8	chr7	140635950	140636004	(18709969)	C	L3b	LINE/CR1	(24)	5208	5148	3767928
337	18.3	0.0	0.0	chr7	140636580	140636639	(18709334)	C	MER5B	DNA/hAT-Charlie	(7)	171	112	3767929
13	25.8	6.1	1.4	chr7	143882595	143882660	(15463313)	+	(CCCCG)n	Simple_repeat	1	70	(0)	3772444
12	13.5	2.8	5.4	chr7	143882854	143882889	(15463084)	+	GA-rich	Low_complexity	1	37	(0)	3772445
446	27.3	12.2	9.2	chr7	148880765	148881026	(10464947)	C	L2c	LINE/L2	(1)	3386	3116	3779534
311	34.2	2.0	10.7	chr7	148881149	148881364	(10464609)	C	Tigger19a	DNA/TcMar-Tigger	(63)	260	64	3779535
1162	15.5	4.6	0.0	chr7	149119813	149120019	(10225954)	+	MER2	DNA/TcMar-Tigger	129	345	(0)	3780080
2856	19.7	3.5	5.9	chr7	149120067	149120114	(10225859)	C	L1MD2	LINE/L1	(382)	5977	5930	3780077
2089	11.5	4.3	0.0	chr7	149120115	149120400	(10225573)	+	AluSg	SINE/Alu	1	299	(11)	3780081
39	27.4	1.5	2.2	chr7	149224014	149224149	(10121824)	+	(CGG)n	Simple_repeat	1	138	(0)	3780321
315	33.3	9.8	0.6	chr7	149225074	149225239	(10120734)	C	MIRc	SINE/MIR	(1)	267	85	3780322
410	30.4	10.1	8.0	chr7	149843416	149843791	(9502182)	C	HAL1	LINE/L1	(1446)	1061	677	3781225
557	32.1	7.9	1.1	chr7	149843802	149844084	(9501889)	C	HAL1	LINE/L1	(2191)	316	13	3781225
438	29.2	13.1	5.4	chr7	149844087	149844310	(9501663)	+	MARNA	DNA/TcMar-Mariner	156	399	(187)	3781227
302	34.8	5.2	3.9	chr7	151173358	151173628	(8172345)	+	L2c	LINE/L2	3098	3341	(34)	3783001
220	32.1	9.6	2.0	chr7	151173824	151174074	(8171899)	+	L2b	LINE/L2	2413	2684	(735)	3783002
230	21.1	1.3	9.5	chr7	151174112	151174195	(8171778)	+	L2b	LINE/L2	3084	3160	(215)	3783002
22	17.9	0.0	0.0	chr7	151427834	151427877	(7918096)	+	(CCT)n	Simple_repeat	1	44	(0)	3783418
798	17.9	3.8	2.6	chr7	151428072	151428226	(7917747)	C	L1MB3	LINE/L1	(0)	6183	6027	3783419
1164	31.2	6.5	2.3	chr7	152355810	152356279	(6989694)	C	L2a	LINE/L2	(1516)	1903	1413	3784929
2307	9.8	0.0	1.3	chr7	152356293	152356599	(6989374)	+	AluSq	SINE/Alu	1	303	(10)	3784931
3146	23.0	4.4	2.6	chr7	155286769	155287039	(4058934)	C	L1MB3	LINE/L1	(597)	5586	5312	3789458
331	30.2	10.5	1.2	chr7	155312959	155313122	(4032851)	C	Tigger15a	DNA/TcMar-Tigger	(420)	295	115	3789491
228	23.1	0.0	1.9	chr7	155313162	155313214	(4032759)	C	MamRTE1	LINE/RTE-BovB	(3563)	249	198	3789492
248	33.6	1.8	0.0	chr7	155349768	155349874	(3996099)	C	HAL1	LINE/L1	(907)	1600	1492	3789534
314	29.9	12.7	1.4	chr7	155465911	155466056	(3879917)	+	L3	LINE/CR1	3924	4088	(11)	3789670
234	16.7	7.0	0.0	chr7	155615084	155615179	(3730794)	C	L1M5	LINE/L1	(749)	5493	5408	3789884
385	28.2	11.5	7.5	chr7	157483302	157483459	(1862514)	C	HAL1	LINE/L1	(1406)	1101	940	3792517
41	17.1	3.8	5.2	chr7	157684341	157684471	(1661502)	+	GA-rich	Low_complexity	1	136	(0)	3792666
25	7.2	2.1	4.1	chr7	157684569	157684616	(1661357)	+	(CCCCT)n	Simple_repeat	1	49	(0)	3792667
18	7.5	8.9	2.0	chr7	157685060	157685104	(1660869)	+	(CCTCGCC)n	Simple_repeat	1	49	(0)	3792668
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
342	29.7	7.4	6.1	chr7	158877348	158877494	(468479)	C	L1ME4a	LINE/L1	(370)	5754	5606	3793836
392	19.2	17.5	2.7	chr7	159335074	159335241	(10732)	C	L1MC	LINE/L1	(2239)	5546	5354	3794334
2278	19.5	0.8	1.9	chr7	159335248	159335741	(10232)	+	TAR1	Satellite/telo	1	488	(313)	3794336
106	0.0	0.0	2.8	chr7	159335868	159335973	(10000)	+	(GTTAGG)n	Simple_repeat	1	106	(0)	3794337
281	6.6	1.4	4.3	chr8	205252	205736	(144932900)	+	(TAACCC)n	Simple_repeat	1	492	(0)	3794561
5249	18.3	11.3	2.1	chr8	205741	207331	(144931305)	C	TAR1	Satellite/telo	(43)	2068	314	3794562
12	16.6	4.5	4.3	chr8	220376	220419	(144918217)	+	(ATTAGTA)n	Simple_repeat	1	46	(0)	3794582
105	2.2	6.6	0.0	chr8	220441	220577	(144918059)	+	(CCCTAAC)n	Simple_repeat	1	146	(0)	3794583
1723	20.7	0.0	0.0	chr8	220595	220893	(144917743)	+	AluSz6	SINE/Alu	3	301	(11)	3794584
1527	17.2	7.9	0.0	chr8	7066788	7067089	(138071547)	+	SATR1	Satellite	50	377	(46)	3802944
1694	20.5	9.3	2.7	chr8	7067138	7068220	(138070416)	C	SATR1	Satellite	(64)	1154	1	3802945
16	9.7	0.0	0.0	chr8	11681493	11681514	(133457122)	+	(G)n	Simple_repeat	1	22	(0)	3809994
1819	23.2	9.5	4.5	chr8	11913730	11915293	(133223343)	+	SATR1	Satellite	1	1641	(0)	3810388
1870	22.4	7.9	5.0	chr8	12713006	12714085	(132424551)	+	SATR1	Satellite	1	1111	(0)	3811456
1500	18.9	7.9	0.0	chr8	12714140	12714441	(132424195)	C	SATR1	Satellite	(46)	377	50	3811457
312	26.5	3.0	4.8	chr8	37394047	37394149	(107744487)	C	L2c	LINE/L2	(0)	3387	3287	3850245
646	22.1	3.9	0.0	chr8	38230926	38231097	(106907539)	C	AluJr	SINE/Alu	(14)	298	120	3851936
199	28.1	13.5	2.4	chr8	42109476	42109705	(103028931)	C	L2a	LINE/L2	(56)	3370	3090	3858158
52	3.7	0.0	0.0	chr8	43247460	43247515	(101891121)	+	(CCCGCAGC)n	Simple_repeat	1	56	(0)	3860336
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
2354	10.0	0.0	1.3	chr8	66661766	66662065	(78476571)	C	AluSc8	SINE/Alu	(14)	297	2	3887821
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
17	15.7	6.3	4.5	chr8	96159204	96159266	(48979370)	+	(TTCC)n	Simple_repeat	1	67	(0)	3929825
15	23.2	1.9	3.8	chr8	96160044	96160095	(48978541)	+	GA-rich	Low_complexity	1	53	(0)	3929826
674	27.9	8.8	4.7	chr8	143171995	143172338	(1966298)	+	MLT1C	LTR/ERVL-MaLR	36	409	(58)	4005849
15	23.5	3.5	1.7	chr8	143276056	143276112	(1862524)	+	(GCCTGGC)n	Simple_repeat	1	59	(0)	4006002
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
1693	30.0	10.9	1.2	chr8	143909234	143910398	(1228238)	C	L1MEd	LINE/L1	(5691)	1395	69	4006834
13	22.2	0.0	8.2	chr8	144049129	144049203	(1089433)	+	(CCCCGGC)n	Simple_repeat	1	68	(0)	4007029
12	16.4	2.1	8.2	chr8	144049273	144049320	(1089316)	+	(GGC)n	Simple_repeat	1	49	(0)	4007030
1663	26.2	5.3	2.6	chr8	144560655	144561112	(577524)	+	Cheshire	DNA/hAT-Charlie	442	912	(1508)	4007740
230	19.4	3.1	0.0	chr8	144583554	144583615	(555021)	C	L1MC4a	LINE/L1	(636)	7246	7183	4007770
275	5.4	2.1	3.6	chr9	10001	10433	(138384284)	+	(TAACCC)n	Simple_repeat	1	442	(0)	4008489
3831	12.7	31.0	1.2	chr9	10436	11574	(138383143)	C	TAR1	Satellite/telo	(13)	2098	469	4008490
213	30.1	5.7	7.8	chr9	806919	807098	(137587619)	+	L2b	LINE/L2	3102	3277	(98)	4009767
618	22.1	11.4	0.0	chr9	807156	807350	(137587367)	C	MIR	SINE/MIR	(35)	227	8	4009768
2509	6.9	0.0	0.3	chr9	842231	842534	(137552183)	C	AluSx	SINE/Alu	(8)	304	2	4009859
601	21.7	13.9	3.9	chr9	998153	998358	(137396359)	C	MIR	SINE/MIR	(0)	262	33	4010102
797	19.6	5.5	2.8	chr9	5950359	5950536	(132444181)	C	MIR	SINE/MIR	(71)	191	9	4017291
249	33.3	0.0	2.0	chr9	5950548	5950648	(132444069)	+	MER5A	DNA/hAT-Charlie	91	189	(0)	4017292
1849	14.9	6.4	3.0	chr9	5950702	5951034	(132443683)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	4017293
49	0.0	0.0	0.0	chr9	5951036	5951077	(132443640)	+	(AC)n	Simple_repeat	1	42	(0)	4017294
1392	18.3	6.1	4.2	chr9	16830283	16830619	(121564098)	C	MER2	DNA/TcMar-Tigger	(1)	344	1	4032437
1384	12.3	4.9	5.6	chr9	34049966	34050214	(104344503)	+	7SK	RNA	1	247	(84)	4056571
279	23.5	16.1	0.0	chr9	34050298	34050391	(104344326)	+	MIR	SINE/MIR	157	262	(0)	4056572
1148	20.6	18.8	0.4	chr9	34624219	34624496	(103770221)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	4057692
2042	20.1	7.8	3.8	chr9	41110592	41111069	(97283648)	+	SATR1	Satellite	1	566	(2282)	4068219
296	22.8	6.0	20.1	chr9	41111070	41111403	(97283314)	C	SATR2	Satellite	(35)	284	1	4068220
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
1539	10.8	6.3	2.0	chr9	66263242	66267618	(72127099)	C	GSATII	Satellite/centr	(32)	4566	1	4077375
2092	21.3	12.6	3.3	chr9	70269929	70270642	(68124075)	C	MER21C	LTR/ERVL	(26)	905	32	4082854
1744	16.4	0.0	2.9	chr9	86559351	86559662	(51835055)	C	AluJo	SINE/Alu	(9)	303	1	4108080
20	15.2	5.9	0.0	chr9	89379041	89379091	(49015626)	+	GA-rich	Low_complexity	1	54	(0)	4112447
1960	17.9	3.3	6.2	chr9	90230728	90231275	(48163442)	C	SATR1	Satellite	(142)	477	1	4113566
1483	12.3	3.6	1.4	chr9	90231276	90231494	(48163223)	C	AluSx	SINE/Alu	(88)	224	1	4113568
420	28.4	1.1	0.0	chr9	105757865	105757984	(32636733)	+	L1ME3Cz	LINE/L1	282	389	(608)	4138020
447	19.8	9.4	1.7	chr9	105758223	105758340	(32636377)	C	MIRc	SINE/MIR	(98)	170	43	4138021
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
182	28.9	8.0	0.0	chr9	121213042	121213145	(17181572)	+	L2a	LINE/L2	3254	3366	(60)	4166508
259	27.7	8.8	0.0	chr9	121213540	121213622	(17181095)	+	MIRb	SINE/MIR	19	109	(159)	4166509
345	28.4	0.0	0.0	chr9	121213676	121213770	(17180947)	C	MIR3	SINE/MIR	(0)	208	114	4166510
191	27.7	5.8	4.4	chr9	124772820	124772887	(13621830)	+	L2a	LINE/L2	3098	3166	(221)	4173185
2348	9.2	0.7	0.0	chr9	125163426	125163728	(13230989)	C	AluSg	SINE/Alu	(5)	305	1	4174028
2083	10.7	4.0	0.3	chr9	125163846	125164136	(13230581)	C	AluSq2	SINE/Alu	(11)	302	1	4174029
1776	8.9	6.6	5.2	chr9	125235208	125235476	(13159241)	C	AluSc	SINE/Alu	(13)	296	24	4174229
19	11.6	0.0	0.0	chr9	126624652	126624679	(11770038)	+	(T)n	Simple_repeat	1	28	(0)	4176721
241	35.4	7.0	5.0	chr9	128066216	128066473	(10328244)	C	L2b	LINE/L2	(0)	3387	3142	4179700
12	16.1	5.7	0.0	chr9	128393111	128393145	(10001572)	+	(CCCCCG)n	Simple_repeat	1	37	(0)	4180408
195	35.9	6.6	1.5	chr9	129142602	129142731	(9251986)	+	MIR1_Amn	SINE/MIR	14	150	(80)	4182170
16	22.6	0.0	0.0	chr9	129175064	129175096	(9219621)	+	A-rich	Low_complexity	1	33	(0)	4182242
778	31.6	10.4	5.2	chr9	129984285	129984630	(8410087)	+	L1M7	LINE/L1	22	390	(2031)	4184038
2890	5.4	0.3	0.8	chr9	129984631	129984986	(8409731)	+	THE1A	LTR/ERVL-MaLR	2	355	(0)	4184039
778	31.6	10.4	5.2	chr9	129984987	129985273	(8409444)	+	L1M7	LINE/L1	391	692	(1729)	4184038
512	28.6	10.8	6.1	chr9	130833988	130834233	(7560484)	+	MIRb	SINE/MIR	4	262	(6)	4185896
462	28.9	9.4	4.9	chr9	131471169	131471412	(6923305)	C	L1MEd	LINE/L1	(2770)	3376	3121	4187162
240	13.9	0.0	0.0	chr9	132695382	132695417	(5699300)	C	MER5A	DNA/hAT-Charlie	(21)	168	133	4189322
2436	7.9	0.0	0.0	chr9	132695429	132695720	(5698997)	+	AluYc	SINE/Alu	1	292	(7)	4189323
471	33.8	0.0	1.4	chr9	132695742	132695882	(5698835)	C	MER5A	DNA/hAT-Charlie	(50)	139	1	4189324
192	25.8	1.5	4.3	chr9	132989495	132989563	(5405154)	C	L2c	LINE/L2	(2)	3385	3319	4189867
26289	21.7	1.2	1.9	chr9	133032543	133037838	(5356879)	C	HERVI-int	LTR/ERV1	(1)	7784	2524	4189956
18	7.6	0.0	0.0	chr9	133191852	133191879	(5202838)	+	(TGAA)n	Simple_repeat	1	28	(0)	4190215
297	23.3	6.5	2.3	chr9	133191958	133192045	(5202672)	C	L2b	LINE/L2	(0)	3375	3284	4190216
1946	15.0	0.6	10.9	chr9	133263473	133263673	(5131044)	+	MER44A	DNA/TcMar-Tigger	144	335	(4)	4190315
445	9.7	4.6	0.0	chr9	133274510	133274571	(5120146)	C	AluSq10	SINE/Alu	(246)	67	3	4190336
12	14.9	8.1	0.0	chr9	133274739	133274775	(5119942)	+	G-rich	Low_complexity	1	40	(0)	4190337
12	12.0	0.0	6.5	chr9	133275842	133275872	(5118845)	+	(GCCCC)n	Simple_repeat	1	31	(0)	4190338
994	15.3	15.2	0.0	chr9	133351479	133351668	(5043049)	C	AluSx	SINE/Alu	(23)	289	66	4190450
2561	4.9	0.0	4.3	chr9	133910529	133910853	(4483864)	+	AluY	SINE/Alu	1	311	(0)	4191243
255	24.7	7.6	6.6	chr9	133910854	133910866	(4483851)	C	MIR3	SINE/MIR	(142)	66	54	4191244
1797	16.2	2.6	0.7	chr9	134014707	134015002	(4379715)	C	AluJb	SINE/Alu	(10)	302	1	4191403
201	33.5	16.0	2.0	chr9	134163183	134163578	(4231139)	+	L2b	LINE/L2	2484	2945	(474)	4191663
665	29.1	4.8	3.2	chr9	136043060	136043536	(2351181)	+	L1M5	LINE/L1	5072	5568	(611)	4193963
2093	13.5	0.7	0.0	chr9	136043822	136044124	(2350593)	C	AluSz	SINE/Alu	(7)	305	1	4193964
214	31.7	7.9	1.2	chr9	136577425	136577507	(1817210)	+	L2a	LINE/L2	3287	3375	(51)	4194518
2686	4.2	0.0	0.3	chr9	136577677	136577985	(1816732)	+	AluY	SINE/Alu	1	308	(3)	4194519
205	15.8	6.6	3.4	chr9	136611597	136611655	(1783062)	+	MIRb	SINE/MIR	115	175	(93)	4194546
559	32.8	13.5	2.5	chr9	136611800	136612257	(1782460)	+	L1MB8	LINE/L1	5527	6059	(119)	4194547
2349	8.2	0.0	2.0	chr9	136612258	136612562	(1782155)	+	AluSx	SINE/Alu	1	299	(13)	4194548
2196	9.6	2.7	0.0	chr9	136730542	136730834	(1663883)	+	AluSx	SINE/Alu	1	301	(11)	4194722
603	10.3	0.0	16.6	chr9	136730835	136730923	(1663794)	+	L1MB3	LINE/L1	6056	6137	(46)	4194723
2129	9.3	1.4	0.3	chr9	136730924	136731213	(1663504)	+	AluSp	SINE/Alu	1	293	(20)	4194724
603	10.3	0.0	16.6	chr9	136731214	136731224	(1663493)	+	L1MB3	LINE/L1	6138	6138	(45)	4194723
1634	16.7	6.8	0.0	chr9	136731225	136731499	(1663218)	+	AluJr	SINE/Alu	1	295	(17)	4194725
183	29.7	3.0	0.0	chr9	137316617	137316680	(1078037)	C	L2c	LINE/L2	(232)	3155	3087	4195487
1901	7.0	0.0	2.1	chr9	137346027	137346267	(1048450)	+	AluY	SINE/Alu	75	310	(1)	4195525
670	24.7	3.4	0.5	chr9	137346609	137346807	(1047910)	C	MLT1E2-int	LTR/ERVL-MaLR	(1166)	205	1	4195523
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
2469	6.4	0.0	1.3	chr9	137418065	137418375	(976342)	+	AluSx	SINE/Alu	1	307	(5)	4195616
1333	23.4	4.1	7.3	chr9	137506248	137506699	(888018)	+	LTR42	LTR/ERVL	59	495	(0)	4195711
2444	6.9	0.3	3.5	chr9	137603627	137603944	(790773)	C	AluY	SINE/Alu	(1)	310	3	4195862
1464	16.1	0.8	6.9	chr9	137624618	137624760	(769957)	C	AluJb	SINE/Alu	(174)	138	2	4195894
549	13.3	21.0	0.0	chr9	137624774	137624871	(769846)	C	AluJo	SINE/Alu	(188)	124	1	4195897
2142	12.8	0.3	0.0	chr9	137624875	137625171	(769546)	C	AluSq2	SINE/Alu	(5)	308	11	4195898
254	14.6	3.4	0.0	chr9	137625371	137625426	(769291)	C	FLAM_C	SINE/Alu	(169)	133	78	4195899
1478	14.7	0.5	0.0	chr9	137625427	137625637	(769080)	C	AluSz6	SINE/Alu	(100)	212	1	4195900
693	28.2	8.3	7.5	chr9	137625638	137625842	(768875)	C	HAL1	LINE/L1	(1225)	1282	1079	4195888
311	27.7	12.2	4.2	chr9	137809663	137809805	(584912)	+	L1MC	LINE/L1	5605	5760	(2122)	4196182
2256	7.6	4.6	0.0	chr9	137840351	137840641	(554076)	C	AluY	SINE/Alu	(6)	305	1	4196215
803	27.9	7.0	6.4	chr9	137840642	137841004	(553713)	C	L1ME2	LINE/L1	(1234)	4912	4548	4196213
2350	10.7	0.3	0.0	chr9	138128711	138129020	(265697)	C	AluSx1	SINE/Alu	(1)	311	1	4196559
86	10.1	0.7	2.1	chr9	138129062	138129204	(265513)	+	(GTTAGG)n	Simple_repeat	1	144	(0)	4196560
755	15.9	0.0	0.0	chr9	138129205	138129317	(265400)	+	AluSx3	SINE/Alu	182	294	(17)	4196561
860	22.0	13.0	0.0	chrX	23782564	23782777	(132258118)	C	Charlie1	DNA/hAT-Charlie	(2535)	246	1	4398056
989	14.3	3.6	1.2	chrX	37285846	37287799	(118753096)	+	(AT)n	Simple_repeat	1	2024	(0)	4417216
1308	28.8	10.8	2.1	chrX	37287800	37288367	(118752528)	C	LTR87	LTR/ERVL?	(1)	623	1	4417217
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
2260	10.8	0.7	2.2	chrX	70122067	70122380	(85918515)	+	AluSq2	SINE/Alu	2	310	(3)	4459147
48	3.5	3.4	0.0	chrX	70122389	70122447	(85918448)	+	(CTCTCC)n	Simple_repeat	1	61	(0)	4459148
10304	4.1	0.7	8.0	chrX	70122448	70123902	(85916993)	+	SVA_B	Retroposon/SVA	35	1383	(0)	4459149
1067	13.6	3.9	0.6	chrX	71117486	71117661	(84923234)	+	AluJb	SINE/Alu	113	294	(18)	4460847
479	32.8	4.5	2.6	chrX	71117677	71117870	(84923025)	+	MIRb	SINE/MIR	27	224	(44)	4460848
426	19.0	9.6	13.9	chrX	71117891	71117992	(84922903)	+	Charlie4z	DNA/hAT-Charlie	1	89	(78)	4460849
26	0.0	0.0	0.0	chrX	71117993	71118017	(84922878)	+	(TAT)n	Simple_repeat	1	25	(0)	4460850
426	19.0	9.6	13.9	chrX	71118018	71118079	(84922816)	+	Charlie4z	DNA/hAT-Charlie	90	156	(11)	4460849
254	32.8	4.7	0.2	chrX	71118158	71118268	(84922627)	C	MIRb	SINE/MIR	(27)	241	123	4460851
48	5.6	0.0	0.0	chrX	72238944	72239000	(83801895)	+	(GGAGCTT)n	Simple_repeat	1	57	(0)	4462954
5121	12.8	2.0	2.4	chrX	77736029	77737142	(78303753)	+	L1MA2	LINE/L1	4954	6083	(221)	4468737
2437	9.9	0.0	0.0	chrX	77737143	77737435	(78303460)	+	AluSg	SINE/Alu	1	293	(17)	4468742
932	30.9	7.3	0.8	chrX	104033630	104034024	(52006871)	C	LTR16A	LTR/ERVL	(7)	444	22	4499465
355	14.5	2.8	0.0	chrX	104034050	104034118	(52006777)	C	L1MEd	LINE/L1	(5553)	1533	1463	4499466
780	27.8	5.4	7.0	chrX	108655021	108655264	(47385631)	+	MIRb	SINE/MIR	17	256	(12)	4506071
256	38.5	0.8	1.6	chrX	108655533	108655656	(47385239)	+	MIR1_Amn	SINE/MIR	43	165	(65)	4506072
1700	15.8	0.0	6.9	chrX	119864527	119864843	(36176052)	+	AluJo	SINE/Alu	2	296	(16)	4522011
462	24.5	3.5	3.0	chrX	119864859	119864877	(36176018)	+	L1ME3B	LINE/L1	6032	6051	(191)	4522012
37	5.7	3.6	0.0	chrX	119864878	119864932	(36175963)	+	(GATCCTGA)n	Simple_repeat	1	57	(0)	4522013
462	24.5	3.5	3.0	chrX	119864933	119865080	(36175815)	+	L1ME3B	LINE/L1	6052	6200	(42)	4522012
1147	21.6	11.4	2.2	chrX	119865081	119865324	(36175571)	+	L2a	LINE/L2	3028	3293	(133)	4522014
1426	9.6	7.8	3.6	chrX	119872294	119872335	(36168560)	C	AluSx	SINE/Alu	(82)	230	193	4522030
2578	5.9	0.3	0.0	chrX	119872336	119872642	(36168253)	+	AluSp	SINE/Alu	1	308	(5)	4522031
4039	15.9	4.5	11.5	chrX	123716916	123717773	(32323122)	+	L1M4c	LINE/L1	4203	4966	(1410)	4527160
432	18.5	6.2	4.9	chrX	123717778	123717877	(32323018)	C	MER2	DNA/TcMar-Tigger	(0)	345	130	4527165
332	22.6	0.0	0.0	chrX	123717878	123717939	(32322956)	+	MER2	DNA/TcMar-Tigger	1	62	(283)	4527166
252	14.3	0.0	4.5	chrX	123717972	123718015	(32322880)	C	MER2	DNA/TcMar-Tigger	(284)	61	20	4527165
3090	15.6	3.3	3.3	chrX	123718038	123718477	(32322418)	+	L1M4c	LINE/L1	4972	5394	(985)	4527160
2592	3.9	0.0	0.7	chrX	123778081	123778386	(32262509)	C	AluY	SINE/Alu	(7)	304	1	4527310
2045	13.7	5.7	4.5	chrX	124004299	124004696	(32036199)	C	L1MB3	LINE/L1	(119)	6064	5662	4527914
3357	20.8	4.3	1.2	chrX	124004785	124004933	(32035962)	C	L1MD2	LINE/L1	(74)	6285	6186	4527915
1501	18.4	8.4	1.9	chrX	124004934	124005255	(32035640)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	4527916
3357	21.4	3.3	7.7	chrX	124005256	124005741	(32035154)	C	L1MD2	LINE/L1	(174)	6185	5741	4527915
287	35.2	3.6	3.0	chrX	135344337	135344500	(20696395)	+	MER5A	DNA/hAT-Charlie	25	189	(0)	4544203
16	9.3	0.0	0.0	chrX	136300214	136300236	(19740659)	+	(A)n	Simple_repeat	1	23	(0)	4545746
16	18.1	4.5	0.0	chrX	136300506	136300549	(19740346)	+	(CTGCCG)n	Simple_repeat	1	46	(0)	4545747
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
219	34.1	5.2	2.1	chrX	150584553	150584645	(5456250)	C	L2c	LINE/L2	(22)	3365	3270	4566137
1445	17.1	9.9	9.9	chrX	150584686	150585029	(5455866)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	4566138
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057