17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
12	15.7	2.6	5.0	chr1	1273983	1274021	(247682401)	+	G-rich	Low_complexity	1	40	(0)	1544
12	24.4	2.2	2.2	chr1	1574178	1574222	(247382200)	+	(GCC)n	Simple_repeat	1	46	(0)	1974
368	19.1	4.5	0.0	chr1	1609966	1610049	(247346373)	+	MER65D	LTR/ERV1	1	88	(443)	2051
400	36.0	3.6	4.0	chr1	1610095	1610181	(247346241)	+	MER65D	LTR/ERV1	181	266	(207)	2051
2197	13.1	6.4	0.3	chr1	1610182	1610533	(247345889)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2052
4092	8.5	1.8	0.2	chr1	8122631	8123171	(240833251)	C	MER41A	LTR/ERV1	(4)	550	1	10968
1017	30.8	8.9	2.4	chr1	8123172	8123386	(240833036)	C	L1MC4	LINE/L1	(242)	7800	7553	10967
11	20.1	2.9	0.0	chr1	8873709	8873742	(240082680)	+	G-rich	Low_complexity	1	35	(0)	12435
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
4508	11.4	0.9	0.3	chr1	9774666	9775292	(239181130)	C	MER41B	LTR/ERV1	(3)	631	1	14350
299	30.4	6.4	4.8	chr1	9775293	9775376	(239181046)	+	MIRb	SINE/MIR	120	208	(22)	14349
2212	9.0	2.4	0.0	chr1	9911435	9911722	(239044700)	C	AluSz	SINE/Alu	(17)	295	1	14609
12	13.3	9.3	2.1	chr1	10033001	10033043	(238923379)	+	G-rich	Low_complexity	1	47	(0)	14941
181	16.0	0.0	5.7	chr1	11100092	11100144	(237856278)	C	MIRc	SINE/MIR	(51)	217	168	17029
531	17.8	8.2	0.0	chr1	11100177	11100277	(237856145)	C	FLAM_A	SINE/Alu	(22)	120	11	17030
827	15.3	11.6	2.5	chr1	11100310	11100466	(237855956)	+	AluJb	SINE/Alu	115	287	(25)	17031
294	35.4	8.9	3.8	chr1	11796704	11796916	(237159506)	+	L3	LINE/CR1	3528	3754	(345)	18473
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
52	0.0	0.0	0.0	chr1	11909549	11909596	(237046826)	+	(GCCCCGCCGT)n	Simple_repeat	1	48	(0)	18710
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
454	26.2	2.4	0.0	chr1	11983779	11983900	(236972522)	C	L2c	LINE/L2	(221)	3166	3042	18895
465	20.5	2.4	13.5	chr1	12075463	12075654	(236880768)	C	MLT1D	LTR/ERVL-MaLR	(274)	231	62	19088
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
3108	11.8	0.2	0.4	chr1	14777711	14778169	(234178253)	C	MER41B	LTR/ERV1	(155)	479	22	23836
1434	19.7	8.3	5.2	chr1	14778170	14778576	(234177846)	C	MER72	LTR/ERV1	(269)	402	1	23837
537	18.1	0.9	0.0	chr1	14882031	14882135	(234074287)	C	MER5A1	DNA/hAT-Charlie	(59)	107	2	24071
380	31.7	5.3	1.6	chr1	14882337	14882550	(234073872)	+	MIRc	SINE/MIR	33	267	(1)	24072
285	33.2	9.7	3.2	chr1	15345869	15346176	(233610246)	C	L3	LINE/CR1	(76)	4023	3694	25057
506	30.8	14.9	3.5	chr1	15346220	15346508	(233609914)	+	MER102c	DNA/hAT-Charlie	1	328	(3)	25058
1343	15.6	11.3	3.3	chr1	15833181	15833305	(233123117)	+	AluJb	SINE/Alu	1	141	(171)	26167
1791	8.9	12.6	0.0	chr1	15833306	15833575	(233122847)	+	AluSz	SINE/Alu	2	310	(2)	26168
32	8.8	0.0	0.0	chr1	15847934	15847981	(233108441)	+	(GCC)n	Simple_repeat	1	48	(0)	26203
2300	11.9	0.0	0.0	chr1	15856566	15856867	(233099555)	C	AluSx1	SINE/Alu	(10)	302	1	26217
1116	18.7	9.3	5.0	chr1	15856868	15856955	(233099467)	+	Charlie4a	DNA/hAT-Charlie	292	376	(132)	26216
371	31.2	8.3	0.7	chr1	15952815	15952969	(233003453)	+	MLT1H	LTR/ERVL-MaLR	321	488	(1)	26388
286	19.5	4.7	2.4	chr1	15952974	15953057	(233003365)	+	L1ME3D	LINE/L1	5983	6068	(174)	26389
920	15.0	0.7	0.0	chr1	15953180	15953312	(233003110)	C	AluJb	SINE/Alu	(178)	134	1	26390
2041	16.7	0.0	1.0	chr1	16615322	16615632	(232340790)	+	AluJb	SINE/Alu	2	309	(3)	27822
1008	16.9	12.1	0.8	chr1	16615738	16615994	(232340428)	+	L1ME2z	LINE/L1	5890	6179	(265)	27815
12	20.1	0.0	2.8	chr1	16616355	16616390	(232340032)	+	(GTTTTT)n	Simple_repeat	1	36	(0)	27825
2442	8.6	0.3	0.0	chr1	16616418	16616718	(232339704)	+	AluSz	SINE/Alu	1	302	(10)	27826
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
2240	9.7	3.9	0.0	chr1	16624670	16624969	(232331453)	+	AluSz	SINE/Alu	1	312	(0)	27844
2159	9.0	3.0	0.7	chr1	16625282	16625571	(232330851)	C	AluSc8	SINE/Alu	(13)	298	2	27845
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
304	30.7	1.7	0.9	chr1	16904653	16904767	(232051655)	+	Charlie4a	DNA/hAT-Charlie	385	500	(8)	28227
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
4196	15.3	4.0	2.3	chr1	17360311	17360529	(231595893)	C	LTR62	LTR/ERVL	(487)	222	1	29249
931	17.8	7.1	0.6	chr1	18415423	18415516	(230540906)	+	AluJb	SINE/Alu	132	237	(75)	31601
4280	13.1	1.1	2.0	chr1	18415517	18416156	(230540266)	+	MER41B	LTR/ERV1	1	634	(0)	31602
2912	20.4	2.6	5.7	chr1	18421927	18422180	(230534242)	+	LTR49-int	LTR/ERV1	181	429	(7778)	31615
3179	14.4	6.5	12.3	chr1	18422181	18422855	(230533567)	+	MER41B	LTR/ERV1	2	634	(0)	31617
3629	15.5	0.2	0.2	chr1	18443197	18443753	(230512669)	C	MER41D	LTR/ERV1	(0)	557	1	31662
760	32.3	4.9	6.5	chr1	18443754	18443867	(230512555)	+	L2a	LINE/L2	2747	2845	(574)	31661
2072	14.9	0.3	0.0	chr1	18443868	18444169	(230512253)	+	AluSz6	SINE/Alu	1	303	(9)	31663
488	19.9	0.9	10.2	chr1	19870336	19870422	(229086000)	+	L1ME3Cz	LINE/L1	558	611	(386)	34678
403	32.7	3.9	5.7	chr1	20184609	20184871	(228771551)	C	L2c	LINE/L2	(1763)	1656	1399	35257
1832	13.4	6.2	2.0	chr1	20184872	20185163	(228771259)	+	AluJb	SINE/Alu	1	305	(7)	35260
226	31.6	13.3	1.0	chr1	21261367	21261465	(227694957)	C	L2c	LINE/L2	(0)	3375	3263	37521
351	29.4	4.0	1.6	chr1	21261574	21261694	(227694728)	+	L2b	LINE/L2	3234	3357	(18)	37522
261	34.9	7.3	6.7	chr1	21261677	21261974	(227694448)	C	L2c	LINE/L2	(116)	3271	2972	37521
2017	9.4	0.0	0.4	chr1	21791927	21792182	(227164240)	+	AluY	SINE/Alu	1	255	(56)	38680
3255	15.4	3.0	4.9	chr1	21792183	21792255	(227164167)	C	MER41B	LTR/ERV1	(562)	72	1	38679
2405	10.1	0.0	0.0	chr1	21792385	21792690	(227163732)	C	AluSx	SINE/Alu	(6)	306	1	38681
43	5.8	1.9	0.0	chr1	21905150	21905203	(227051219)	+	(AC)n	Simple_repeat	1	55	(0)	38920
195	36.1	3.2	14.8	chr1	21905204	21905236	(227051186)	+	L2a	LINE/L2	2922	2935	(484)	38919
36	7.2	0.0	0.0	chr1	21905237	21905280	(227051142)	+	(AC)n	Simple_repeat	1	44	(0)	38921
274	28.8	7.9	3.7	chr1	21905281	21905457	(227050965)	+	L2a	LINE/L2	2936	3145	(281)	38919
278	28.1	3.3	0.0	chr1	21906752	21906840	(227049582)	+	MER103C	DNA/hAT-Charlie	200	291	(6)	38927
19	20.1	3.3	3.2	chr1	22053256	22053316	(226903106)	+	(GGCGG)n	Simple_repeat	1	63	(0)	39318
26	6.0	1.6	9.2	chr1	23018805	23018868	(225937554)	+	G-rich	Low_complexity	1	65	(0)	41472
181	24.4	0.0	0.0	chr1	23018902	23018946	(225937476)	C	L2	LINE/L2	(350)	3069	3025	41473
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
12	15.0	3.3	0.0	chr1	23344075	23344104	(225612318)	+	(CCACCC)n	Simple_repeat	1	31	(0)	42186
197	29.4	7.6	0.0	chr1	24438631	24438715	(224517707)	+	L2b	LINE/L2	3238	3370	(56)	44893
48	6.4	4.7	2.2	chr1	24730291	24730380	(224226042)	+	(GGGGGA)n	Simple_repeat	1	92	(0)	45595
302	16.3	11.3	2.8	chr1	25239653	25239750	(223716672)	C	FRAM	SINE/Alu	(10)	156	79	46682
20	16.5	5.4	1.7	chr1	25431020	25431075	(223525347)	+	(GCG)n	Simple_repeat	1	59	(0)	47148
468	33.1	12.7	1.5	chr1	26049855	26050127	(222906295)	+	LTR16D1	LTR/ERVL	316	623	(52)	48424
3041	11.8	8.5	4.9	chr1	26050119	26050664	(222905758)	+	MER39B	LTR/ERV1	5	587	(66)	48425
434	25.4	6.0	4.0	chr1	26120101	26120248	(222836174)	+	MER58C	DNA/hAT-Charlie	39	189	(26)	48617
211	17.5	2.4	0.0	chr1	26126236	26126275	(222830147)	C	MIRc	SINE/MIR	(18)	250	210	48623
236	21.9	2.2	4.4	chr1	26284515	26284630	(222671792)	C	MIR3	SINE/MIR	(8)	222	110	48978
290	17.5	3.1	0.0	chr1	26287248	26287310	(222669112)	C	Charlie24	DNA/hAT-Charlie	(11)	2439	2375	48983
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
12	12.6	0.0	3.6	chr1	26695918	26695945	(222260477)	+	(CCGC)n	Simple_repeat	1	28	(0)	50001
35	1.7	6.2	4.3	chr1	26695951	26696015	(222260407)	+	(CCCT)n	Simple_repeat	1	69	(0)	50002
549	27.6	5.0	0.0	chr1	27155433	27155584	(221800838)	+	MIR	SINE/MIR	72	231	(31)	51053
207	31.0	5.8	5.8	chr1	27155583	27155652	(221800770)	C	MIR	SINE/MIR	(106)	156	90	51054
1834	19.5	9.8	1.4	chr1	27155653	27155909	(221800513)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	187	51055
238	34.0	1.0	2.8	chr1	27341684	27341789	(221614633)	C	MIRb	SINE/MIR	(145)	123	20	51547
16	8.3	0.0	0.0	chr1	27529236	27529261	(221427161)	+	(CCTC)n	Simple_repeat	1	26	(0)	51968
22	21.2	0.0	0.0	chr1	27603144	27603195	(221353227)	+	(C)n	Simple_repeat	1	52	(0)	52101
27	24.1	5.0	1.0	chr1	27603753	27603859	(221352563)	+	(CTCT)n	Simple_repeat	1	111	(0)	52102
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
327	22.8	10.2	1.7	chr1	28247681	28247796	(220708626)	C	MIRb	SINE/MIR	(1)	267	141	53647
920	11.4	6.4	2.0	chr1	28247810	28247958	(220708464)	+	AluJr	SINE/Alu	157	312	(0)	53648
41	15.7	0.0	2.4	chr1	28260101	28260183	(220696239)	+	(CCCCTC)n	Simple_repeat	1	83	(0)	53685
2226	7.8	3.1	0.3	chr1	28351164	28351446	(220604976)	C	AluSg4	SINE/Alu	(19)	291	1	53975
2271	10.5	0.0	0.0	chr1	28351447	28351741	(220604681)	C	AluSc8	SINE/Alu	(16)	295	1	53976
447	12.7	6.6	0.0	chr1	28412957	28413027	(220543395)	+	MER1B	DNA/hAT-Charlie	57	132	(207)	54136
725	6.9	2.9	0.0	chr1	28413031	28413132	(220543290)	+	MER1B	DNA/hAT-Charlie	235	339	(0)	54137
438	22.1	2.7	6.5	chr1	28413335	28413489	(220542933)	C	HAL1	LINE/L1	(629)	1878	1730	54138
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
523	28.9	6.8	0.0	chr1	28511132	28511292	(220445130)	+	MIR	SINE/MIR	34	206	(56)	54385
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
372	29.2	0.0	0.0	chr1	28882364	28882459	(220073963)	+	MIRc	SINE/MIR	57	152	(116)	55396
1568	8.5	0.0	1.5	chr1	28884201	28884400	(220072022)	+	AluSx3	SINE/Alu	105	301	(10)	55400
622	26.4	3.5	1.0	chr1	29156443	29156637	(219799785)	C	MIR	SINE/MIR	(32)	230	31	56046
3654	9.9	0.4	5.2	chr1	29156731	29157306	(219799116)	C	LTR14	LTR/ERVK	(0)	548	1	56047
614	28.6	8.7	0.9	chr1	29182217	29182438	(219773984)	+	MIRb	SINE/MIR	28	268	(0)	56089
34	24.9	3.8	0.9	chr1	30727879	30727984	(218228438)	+	(TCTC)n	Simple_repeat	1	110	(0)	58929
195	23.5	1.6	0.4	chr1	30728106	30728166	(218228256)	C	L3b	LINE/CR1	(2)	5230	5184	58930
242	28.4	1.1	4.3	chr1	30756720	30756811	(218199611)	+	L3b	LINE/CR1	4990	5078	(154)	58991
182	30.6	0.0	0.0	chr1	30756942	30756990	(218199432)	C	MIR3	SINE/MIR	(104)	104	56	58993
241	30.6	3.0	1.2	chr1	30766257	30766367	(218190055)	C	MIR	SINE/MIR	(32)	198	84	59015
225	12.7	4.2	0.0	chr1	30768494	30768538	(218187884)	+	MIR3	SINE/MIR	102	149	(59)	59020
477	28.2	3.0	5.8	chr1	30768785	30768957	(218187465)	C	MIRc	SINE/MIR	(53)	215	48	59021
611	23.0	6.3	5.8	chr1	30777041	30777229	(218179193)	C	MIR	SINE/MIR	(60)	208	19	59038
326	30.7	11.3	0.2	chr1	30777173	30777357	(218179065)	+	MIRb	SINE/MIR	20	233	(35)	59039
505	19.0	25.6	0.0	chr1	30778294	30778456	(218177966)	+	MIR	SINE/MIR	21	239	(23)	59041
667	27.5	4.6	11.8	chr1	30778486	30778840	(218177582)	+	MLT1K	LTR/ERVL-MaLR	101	428	(167)	59042
2423	9.3	0.0	0.0	chr1	31162519	31162820	(217793602)	+	AluSq	SINE/Alu	3	304	(9)	59999
2927	19.7	2.2	12.8	chr1	31171162	31171364	(217785058)	+	LTR8	LTR/ERV1	1	192	(499)	60029
14	18.6	2.7	0.0	chr1	31761018	31761054	(217195368)	+	G-rich	Low_complexity	1	38	(0)	61271
16	12.1	2.5	4.9	chr1	31955077	31955117	(217001305)	+	(AGGC)n	Simple_repeat	1	40	(0)	61705
18	16.8	2.5	0.0	chr1	32200281	32200320	(216756102)	+	(CTG)n	Simple_repeat	1	41	(0)	62301
22	11.8	2.7	0.0	chr1	32200326	32200362	(216756060)	+	(TC)n	Simple_repeat	1	38	(0)	62302
871	23.4	19.8	11.7	chr1	32520474	32520660	(216435762)	+	LTR41C	LTR/ERVL	1	223	(478)	63049
2439	5.6	0.3	0.7	chr1	32520661	32520964	(216435458)	C	AluY	SINE/Alu	(8)	303	1	63050
200	31.1	4.3	2.2	chr1	32761152	32761243	(216195179)	+	MIR	SINE/MIR	39	132	(130)	63676
192	28.8	3.6	4.8	chr1	32761265	32761348	(216195074)	C	MER5A	DNA/hAT-Charlie	(49)	140	58	63677
445	33.8	12.3	0.7	chr1	34843462	34843735	(214112687)	C	L3b	LINE/CR1	(94)	5138	4829	67525
373	21.3	18.6	0.8	chr1	34843950	34844096	(214112326)	C	MIRb	SINE/MIR	(40)	228	39	67526
480	17.3	1.2	0.0	chr1	35265227	35265307	(213691115)	+	Arthur1A	DNA/hAT-Tip100	42	123	(54)	68414
14	4.5	0.0	4.0	chr1	35265310	35265334	(213691088)	+	(AAAC)n	Simple_repeat	1	25	(0)	68415
3196	21.1	4.7	8.3	chr1	35278720	35280084	(213676338)	C	MLT1C-int	LTR/ERVL-MaLR	(103)	1386	44	68443
229	29.5	18.9	1.1	chr1	35719186	35719446	(213236976)	+	L2a	LINE/L2	2949	3266	(160)	69319
242	19.8	3.4	7.5	chr1	35930088	35930180	(213026242)	C	L2a	LINE/L2	(1)	3425	3337	69779
188	33.3	4.9	0.0	chr1	35930475	35930552	(213025870)	C	L2	LINE/L2	(528)	2891	2810	69780
19	11.5	2.5	2.4	chr1	36157018	36157057	(212799365)	+	GA-rich	Low_complexity	1	41	(0)	70249
13	34.7	0.0	0.0	chr1	36157095	36157152	(212799270)	+	G-rich	Low_complexity	1	58	(0)	70250
351	30.0	5.9	1.6	chr1	36223857	36224071	(212732351)	C	MIRc	SINE/MIR	(9)	259	29	70423
1044	13.0	16.3	0.0	chr1	36247652	36247867	(212708555)	C	L1MA8	LINE/L1	(37)	6254	5997	70485
2366	9.1	0.0	1.6	chr1	36247871	36248179	(212708243)	C	AluSx	SINE/Alu	(8)	304	1	70486
212	35.8	8.4	0.8	chr1	36375073	36375193	(212581229)	+	MIR	SINE/MIR	81	211	(51)	70726
1923	15.1	0.3	0.7	chr1	36398374	36398671	(212557751)	+	AluJb	SINE/Alu	1	297	(15)	70784
1216	14.2	8.2	2.7	chr1	36398672	36399065	(212557357)	+	LTR54	LTR/ERV1	25	489	(21)	70783
525	35.4	8.6	0.0	chr1	37449829	37450051	(211506371)	+	MIR	SINE/MIR	9	252	(10)	72751
13	17.8	3.5	6.7	chr1	37450122	37450179	(211506243)	+	(CACCTCC)n	Simple_repeat	1	60	(0)	72752
1764	13.5	0.7	2.7	chr1	37450180	37450476	(211505946)	C	AluJo	SINE/Alu	(21)	291	1	72753
2168	6.3	5.7	0.4	chr1	37922431	37922698	(211033724)	+	AluY	SINE/Alu	2	284	(27)	73717
26	0.0	3.5	0.0	chr1	37922699	37922727	(211033695)	+	(AAAAT)n	Simple_repeat	1	30	(0)	73718
399	24.4	3.4	0.3	chr1	37931356	37931482	(211024940)	C	MIR3	SINE/MIR	(89)	141	10	73736
194	20.5	0.0	2.5	chr1	37999908	37999947	(210956475)	C	OldhAT1	DNA/hAT-Ac	(2351)	497	459	73887
2126	6.2	3.9	1.5	chr1	38012049	38012347	(210944075)	C	AluSg	SINE/Alu	(0)	310	1	73916
288	17.3	3.7	0.0	chr1	38990757	38990808	(209965614)	C	Charlie4z	DNA/hAT-Charlie	(88)	79	26	75806
182	32.5	14.9	1.5	chr1	39026636	39026832	(209929590)	+	L2	LINE/L2	2853	3080	(339)	75887
524	24.9	12.8	3.8	chr1	40039338	40039550	(208916872)	+	MIRb	SINE/MIR	31	265	(3)	77994
13	25.2	0.0	2.3	chr1	40057497	40057540	(208898882)	+	(TTTCT)n	Simple_repeat	1	44	(0)	78033
681	32.5	1.5	0.5	chr1	40059793	40059984	(208896438)	C	MIR3	SINE/MIR	(12)	196	3	78038
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
17	10.1	3.1	0.0	chr1	42958185	42958216	(205998206)	+	(GCCGGG)n	Simple_repeat	1	33	(0)	83430
528	19.3	20.2	1.2	chr1	42963707	42963874	(205992548)	+	L1ME3A	LINE/L1	5836	6043	(130)	83440
983	16.9	2.4	11.4	chr1	42963892	42964164	(205992258)	+	MER96B	DNA/hAT-Tip100	170	417	(0)	83441
1267	32.1	13.1	2.3	chr1	43522548	43523633	(205432789)	C	L2c	LINE/L2	(154)	3233	2005	84451
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
581	20.9	3.5	0.0	chr1	44819555	44819664	(204136758)	C	AluSx3	SINE/Alu	(17)	294	181	86770
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
310	19.8	1.0	10.6	chr1	45751173	45751285	(203205137)	C	Charlie9	DNA/hAT-Charlie	(1)	2756	2661	88685
1677	8.4	0.9	0.5	chr1	46156263	46156477	(202799945)	+	AluSx	SINE/Alu	86	301	(11)	89447
294	31.4	12.4	5.5	chr1	46340413	46340614	(202615808)	+	L2b	LINE/L2	3009	3226	(149)	89844
12	17.6	8.9	0.0	chr1	46341238	46341282	(202615140)	+	(CCCTTT)n	Simple_repeat	1	49	(0)	89845
109	16.1	0.0	1.0	chr1	46443286	46443478	(202512944)	+	(CCT)n	Simple_repeat	1	193	(0)	90055
201	32.9	1.4	2.7	chr1	46544914	46544988	(202411434)	C	MIRb	SINE/MIR	(77)	191	118	90225
201	27.7	0.0	0.0	chr1	46545134	46545180	(202411242)	+	L2b	LINE/L2	3291	3337	(38)	90226
227	25.0	6.2	1.6	chr1	47178910	47178970	(201777452)	C	Zaphod2	DNA/hAT-Tip100	(0)	3524	3461	91047
39	0.0	2.7	0.0	chr1	47179099	47179135	(201777287)	+	(TC)n	Simple_repeat	1	38	(0)	91048
12	8.4	0.0	6.9	chr1	47184761	47184789	(201771633)	+	(CCCTA)n	Simple_repeat	1	29	(0)	91054
16	25.8	0.0	0.0	chr1	47229392	47229429	(201726993)	+	GA-rich	Low_complexity	1	38	(0)	91123
610	31.3	9.4	0.0	chr1	47921865	47922094	(201034328)	C	MIRb	SINE/MIR	(7)	261	8	92559
227	23.0	12.9	3.9	chr1	47922137	47922213	(201034209)	C	MamRTE1	LINE/RTE-BovB	(3597)	215	131	92560
23	13.7	2.7	7.8	chr1	51519364	51519438	(197436984)	+	(CCCG)n	Simple_repeat	1	77	(0)	98834
244	31.8	7.0	0.9	chr1	51519558	51519665	(197436757)	+	MIRb	SINE/MIR	88	202	(66)	98835
283	26.9	11.0	0.0	chr1	51519716	51519818	(197436604)	C	MIR3	SINE/MIR	(109)	159	45	98836
2504	12.6	5.2	0.9	chr1	54893126	54893551	(194062871)	C	MER65A	LTR/ERV1	(0)	445	1	106122
256	31.4	9.7	6.0	chr1	54893552	54893580	(194062842)	C	L1ME4a	LINE/L1	(459)	5665	5646	106121
883	13.3	1.5	0.0	chr1	54893598	54893725	(194062697)	+	AluJo	SINE/Alu	2	131	(181)	106123
16	4.5	0.0	0.0	chr1	58896794	58896816	(190059606)	+	(GGGA)n	Simple_repeat	1	23	(0)	113763
28	13.7	0.0	4.8	chr1	65310202	65310263	(183646159)	+	G-rich	Low_complexity	1	62	(0)	125554
1842	24.1	1.4	5.1	chr1	67060591	67061120	(181895302)	C	MER65B	LTR/ERV1	(21)	510	1	128164
1781	19.3	1.9	0.0	chr1	67061125	67061435	(181894987)	+	MLT1A0	LTR/ERVL-MaLR	48	364	(1)	128163
26	0.0	0.0	0.0	chr1	67897548	67897572	(181058850)	+	(GCAG)n	Simple_repeat	1	25	(0)	129780
840	21.2	7.2	1.4	chr1	67916720	67916929	(181039493)	+	MIR	SINE/MIR	8	230	(32)	129805
601	18.9	14.5	6.9	chr1	67923019	67923337	(181033085)	C	LTR54	LTR/ERV1	(112)	386	1	129820
14094	14.3	2.0	2.9	chr1	67923338	67925906	(181030516)	C	MER57A-int	LTR/ERV1	(392)	5795	3251	129818
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
414	29.1	14.0	4.2	chr1	83918921	83919228	(165037194)	+	MLT1H1	LTR/ERVL-MaLR	187	514	(65)	151813
40	0.0	0.0	0.0	chr1	83919260	83919293	(165037129)	+	(GT)n	Simple_repeat	1	34	(0)	151814
13	8.8	0.0	3.9	chr1	86461422	86461447	(162494975)	+	(AAG)n	Simple_repeat	1	26	(0)	155636
2658	11.1	2.7	0.0	chr1	86461466	86461862	(162494560)	C	MER61E	LTR/ERV1	(161)	408	1	155637
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
2301	12.3	0.0	0.3	chr1	89538712	89539021	(159417401)	C	AluSx1	SINE/Alu	(3)	309	1	159994
461	22.4	17.1	0.0	chr1	89545902	89546071	(159410351)	+	L1MC5	LINE/L1	9091	9295	(9)	160002
3671	18.8	5.1	0.8	chr1	89890589	89890873	(159065549)	C	L1MC4a	LINE/L1	(1)	7881	7576	160498
235	34.9	3.6	2.8	chr1	89897731	89897839	(159058583)	C	MIRb	SINE/MIR	(156)	112	3	160509
22	5.8	0.0	5.0	chr1	89999333	89999372	(158957050)	+	(AGGGAG)n	Simple_repeat	1	40	(0)	160690
4527	12.1	0.9	1.7	chr1	91706159	91706797	(157249625)	+	MER41B	LTR/ERV1	1	634	(0)	163127
423	33.5	1.6	5.0	chr1	91707095	91707292	(157249130)	C	MIR3	SINE/MIR	(16)	192	2	163128
193	32.7	5.6	9.5	chr1	91707293	91707450	(157248972)	C	MamRTE1	LINE/RTE-BovB	(3396)	416	266	163129
16	24.0	0.0	0.0	chr1	96722436	96722479	(152233943)	+	G-rich	Low_complexity	1	44	(0)	171073
1745	33.9	6.3	5.2	chr1	102654532	102655169	(146301253)	C	L2a	LINE/L2	(2175)	1244	587	179589
4085	13.0	1.4	0.2	chr1	102655170	102655795	(146300627)	+	MER41B	LTR/ERV1	1	634	(0)	179591
730	28.0	10.1	3.3	chr1	108533632	108534089	(140422333)	C	LTR78	LTR/ERV1	(42)	1262	770	186882
1830	4.2	1.4	0.9	chr1	108534095	108534333	(140422089)	C	AluY	SINE/Alu	(0)	311	67	186883
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
2169	9.9	0.0	0.3	chr1	109241040	109241322	(139715100)	+	AluSx	SINE/Alu	22	303	(9)	188289
397	28.6	0.0	1.6	chr1	109826897	109827017	(139129405)	C	LTR104_Mam	LTR/Gypsy	(1323)	186	68	189148
322	30.8	6.2	10.8	chr1	109827282	109827400	(139129022)	C	MIR	SINE/MIR	(3)	259	150	189149
46513	6.5	3.6	0.8	chr1	109837311	109839098	(139117324)	+	HUERS-P1-int	LTR/ERV1	4375	6263	(0)	189157
5162	7.5	3.8	0.0	chr1	109839099	109839763	(139116659)	+	LTR8	LTR/ERV1	1	691	(0)	189157
2108	10.6	10.8	9.2	chr1	109863708	109863930	(139092492)	C	LTR56	LTR/ERV1	(209)	236	1	189188
2842	14.1	4.9	2.1	chr1	109864097	109864616	(139091806)	C	MER41B	LTR/ERV1	(38)	596	1	189191
295	29.7	12.9	2.2	chr1	109979553	109979779	(138976643)	C	MIRc	SINE/MIR	(13)	255	1	189386
262	32.6	3.2	3.9	chr1	109980014	109980268	(138976154)	+	L1ME4c	LINE/L1	478	730	(100)	189387
4051	10.7	0.2	0.0	chr1	110031079	110031631	(138924791)	C	MER41A	LTR/ERV1	(0)	554	1	189448
181	17.6	0.0	0.0	chr1	110031638	110031671	(138924751)	C	MIRc	SINE/MIR	(106)	162	129	189449
16	21.9	0.0	6.7	chr1	110211381	110211440	(138744982)	+	(CCGCCT)n	Simple_repeat	1	60	(0)	189743
2471	5.8	0.0	0.3	chr1	112462063	112462355	(136494067)	+	AluY	SINE/Alu	1	292	(19)	193153
8741	5.1	0.7	0.0	chr1	112816778	112817803	(136138619)	C	LTR5A	LTR/ERVK	(0)	1033	1	193834
2222	15.0	8.0	2.8	chr1	112902167	112902510	(136053912)	C	LTR54B	LTR/ERV1	(134)	364	1	194017
1425	22.2	2.5	8.3	chr1	112902511	112902700	(136053722)	+	MER21C	LTR/ERVL	495	747	(191)	194019
298	31.5	1.1	0.0	chr1	112954403	112954491	(136001931)	+	MIR3	SINE/MIR	101	190	(18)	194125
250	29.1	2.5	7.1	chr1	112957314	112957439	(135998983)	C	L2c	LINE/L2	(14)	3373	3254	194129
187	21.4	0.0	2.3	chr1	112957430	112957472	(135998950)	C	L2b	LINE/L2	(10)	3365	3324	194130
328	31.4	0.0	0.0	chr1	112957540	112957625	(135998797)	C	MIRb	SINE/MIR	(71)	197	112	194131
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
2251	11.8	0.0	1.9	chr1	114379670	114379983	(134576439)	+	AluSq2	SINE/Alu	1	308	(5)	196478
1186	17.8	21.8	11.7	chr1	114379984	114380421	(134576001)	+	LTR36	LTR/ERV1	123	611	(0)	196475
1656	15.2	8.1	0.7	chr1	114582047	114582322	(134374100)	C	AluJr	SINE/Alu	(10)	302	5	196898
14	5.0	0.0	0.0	chr1	114757666	114757686	(134198736)	+	(CAC)n	Simple_repeat	1	21	(0)	197230
194	15.4	2.5	0.0	chr1	116687853	116687891	(132268531)	+	L2b	LINE/L2	3334	3373	(2)	200111
213	24.1	1.6	2.8	chr1	117060732	117060815	(131895607)	+	MIR3	SINE/MIR	64	147	(115)	200698
39	8.3	6.4	0.0	chr1	118988141	118988218	(129968204)	+	(TC)n	Simple_repeat	1	83	(0)	203448
14	19.6	6.4	0.0	chr1	118988320	118988366	(129968056)	+	GA-rich	Low_complexity	1	50	(0)	203449
591	22.0	3.6	3.0	chr1	120354987	120355150	(128601272)	+	U1	snRNA	1	165	(0)	205414
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
1000	7.1	1.2	0.6	chr1	121418421	121418590	(127537832)	C	SVA_A	Retroposon/SVA	(1215)	172	2	207038
940	20.8	17.4	10.4	chr1	143720101	143720503	(105235919)	C	LTR4	LTR/ERV1	(111)	485	49	208223
608	22.2	0.0	2.3	chr1	143720514	143720642	(105235780)	C	U1	snRNA	(37)	128	3	208224
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
595	17.9	19.5	14.5	chr1	145281642	145281931	(103674491)	C	AluSz	SINE/Alu	(0)	312	5	210765
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1161	10.3	1.3	0.0	chr1	145990194	145990349	(102966073)	C	AluSg4	SINE/Alu	(18)	292	135	211886
2083	12.2	0.0	0.7	chr1	145991148	145991433	(102964989)	+	AluSg	SINE/Alu	2	285	(25)	211888
1188	16.7	3.4	15.8	chr1	145991760	145992094	(102964328)	+	AluJo	SINE/Alu	2	293	(19)	211891
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
425	20.4	15.0	5.2	chr1	147671802	147671885	(101284537)	+	MLT1B	LTR/ERVL-MaLR	1	107	(283)	214459
4104	12.2	2.0	2.2	chr1	147671886	147672520	(101283902)	+	MER41B	LTR/ERV1	1	634	(0)	214460
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
312	22.4	1.6	11.2	chr1	149637049	149637182	(99319240)	+	AluSz	SINE/Alu	2	122	(190)	217502
1476	6.7	0.0	0.0	chr1	150634650	150634829	(98321593)	+	HERVK-int	LTR/ERVK	7262	7441	(95)	219502
225	22.1	2.5	17.2	chr1	150634830	150634922	(98321500)	+	SVA_E	Retroposon/SVA	853	931	(451)	219503
6775	10.1	1.6	0.9	chr1	150634924	150635885	(98320537)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	219504
15	12.9	5.0	7.9	chr1	150926373	150926432	(98029990)	+	(CTTCCC)n	Simple_repeat	1	63	(0)	220139
17	25.7	0.0	0.0	chr1	151282307	151282352	(97674070)	+	(GCG)n	Simple_repeat	1	46	(0)	220903
826	31.9	5.5	6.0	chr1	151596442	151596824	(97359598)	+	L2c	LINE/L2	3002	3382	(5)	221562
4089	9.7	2.2	0.2	chr1	153343705	153344272	(95612150)	+	LTR19B	LTR/ERV1	1	580	(0)	223933
16	11.6	0.0	0.0	chr1	153697382	153697409	(95259013)	+	(CAGG)n	Simple_repeat	1	28	(0)	224564
14	15.7	2.6	2.6	chr1	153728032	153728069	(95228353)	+	(CCTCCGC)n	Simple_repeat	1	39	(0)	224669
15	28.9	2.7	2.6	chr1	154220842	154220916	(94735506)	+	G-rich	Low_complexity	1	77	(0)	225710
26	15.3	2.0	0.0	chr1	154220984	154221040	(94735382)	+	(GCG)n	Simple_repeat	1	58	(0)	225711
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
13	18.3	4.4	2.1	chr1	155013677	155013721	(93942701)	+	G-rich	Low_complexity	1	47	(0)	227198
491	27.7	9.9	6.8	chr1	155050162	155050377	(93906045)	+	MIRc	SINE/MIR	3	221	(47)	227263
12	18.3	0.0	3.0	chr1	155255459	155255491	(93700931)	+	G-rich	Low_complexity	1	33	(0)	227628
456	11.5	3.3	4.4	chr1	155307213	155307272	(93649150)	+	MER51B	LTR/ERV1	318	377	(0)	227710
432	10.3	0.0	0.0	chr1	155307273	155307340	(93649082)	C	L1MB3	LINE/L1	(250)	5933	5866	227712
2126	11.9	4.9	0.3	chr1	155307341	155307693	(93648729)	+	MER41A	LTR/ERV1	1	370	(184)	227713
8453	3.5	0.0	0.1	chr1	155599537	155600505	(93355917)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	228407
2021	8.5	0.3	14.5	chr1	155600546	155600753	(93355669)	C	AluSx	SINE/Alu	(10)	302	119	228408
16	13.3	0.0	5.4	chr1	155688680	155688722	(93267700)	+	(CCT)n	Simple_repeat	1	40	(0)	228558
393	31.6	4.6	3.6	chr1	156755370	156755563	(92200859)	+	MIRb	SINE/MIR	3	198	(70)	230682
184	26.5	9.4	2.5	chr1	156755592	156755689	(92200733)	+	MIR3	SINE/MIR	54	158	(110)	230683
456	30.0	13.0	3.9	chr1	156755796	156755967	(92200455)	+	MIR	SINE/MIR	10	206	(56)	230684
269	33.0	2.1	3.1	chr1	160540626	160540722	(88415700)	C	L2b	LINE/L2	(4)	3371	3276	235897
20	10.7	2.4	2.3	chr1	160549412	160549453	(88406969)	+	(AAGGCAC)n	Simple_repeat	1	43	(0)	235910
414	29.4	9.6	1.2	chr1	160549462	160549623	(88406799)	+	MER91A	DNA/hAT-Tip100	18	194	(2)	235911
449	31.9	7.1	1.1	chr1	160651940	160652123	(88304299)	C	MIRb	SINE/MIR	(65)	203	8	236078
6789	10.8	0.8	1.0	chr1	160652139	160653095	(88303327)	+	LTR5_Hs	LTR/ERVK	1	955	(13)	236079
8267	4.2	0.2	0.4	chr1	161016835	161017804	(87938618)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	236704
13	9.7	0.0	0.0	chr1	161306389	161306410	(87650012)	+	(AGC)n	Simple_repeat	1	22	(0)	237266
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
333	32.5	8.5	5.4	chr1	163321388	163321592	(85634830)	+	MIRb	SINE/MIR	42	253	(15)	240578
4022	8.0	0.9	3.4	chr1	166692851	166693418	(82263004)	C	MER41A	LTR/ERV1	(0)	554	1	245613
746	32.3	13.1	3.3	chr1	166705221	166705697	(82250725)	C	LTR16E1	LTR/ERVL	(12)	526	3	245632
402	28.4	0.9	0.0	chr1	166705698	166705806	(82250616)	C	L2a	LINE/L2	(269)	3157	3048	245633
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
12	13.9	0.0	0.0	chr1	167220935	167220958	(81735464)	+	(CAG)n	Simple_repeat	1	24	(0)	246372
308	22.4	12.7	14.3	chr1	167936971	167937179	(81019243)	C	L1MDb	LINE/L1	(5653)	756	552	247570
2476	23.3	4.5	4.2	chr1	170067297	170068769	(78887653)	+	L1MB5	LINE/L1	7	1811	(5809)	250820
1907	15.0	10.8	3.5	chr1	174204636	174205029	(74751393)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	256903
12143	9.3	3.5	1.1	chr1	174205030	174205847	(74750575)	C	L1PREC2	LINE/L1	(2223)	3923	3075	256901
641	17.3	3.5	7.3	chr1	176220130	176220279	(72736143)	C	AluJb	SINE/Alu	(1)	311	168	259908
3251	13.3	1.4	0.6	chr1	176220287	176220801	(72735621)	+	MER41B	LTR/ERV1	3	521	(113)	259909
2125	14.2	1.5	2.6	chr1	179060361	179060701	(69895721)	+	MER1B	DNA/hAT-Charlie	1	337	(2)	264073
1348	24.1	11.4	5.5	chr1	179060702	179060896	(69895526)	C	L1ME4b	LINE/L1	(464)	428	224	264071
3934	7.6	5.0	0.2	chr1	179363083	179363609	(69592813)	C	MER41A	LTR/ERV1	(0)	554	1	264713
17	14.8	3.8	1.2	chr1	180230210	180230254	(68726168)	+	G-rich	Low_complexity	1	46	(0)	266085
3652	14.9	8.6	0.6	chr1	180563374	180564027	(68392395)	C	MER50	LTR/ERV1	(23)	711	1	266577
259	30.1	8.9	4.3	chr1	181033063	181033270	(67923152)	C	MIRc	SINE/MIR	(48)	220	3	267338
637	26.2	6.2	8.0	chr1	181151330	181151541	(67804881)	+	MIRb	SINE/MIR	21	228	(40)	267555
221	32.3	6.9	9.1	chr1	181151636	181151881	(67804541)	+	L2a	LINE/L2	3135	3408	(18)	267556
3896	12.8	4.1	0.7	chr1	181173937	181174423	(67781999)	+	MER41B	LTR/ERV1	1	509	(125)	267598
609	31.4	5.1	5.5	chr1	182259536	182259828	(66696594)	C	UCON26	Unknown	(1)	342	51	269119
19	19.6	1.4	6.8	chr1	182391987	182392059	(66564363)	+	G-rich	Low_complexity	1	74	(0)	269391
258	25.8	15.8	6.2	chr1	182587058	182587313	(66369109)	C	L1ME4a	LINE/L1	(23)	6101	5817	269702
2247	8.5	0.3	2.9	chr1	182614381	182614696	(66341726)	+	AluSx	SINE/Alu	1	308	(4)	269751
407	27.7	4.7	4.2	chr1	182614697	182614772	(66341650)	+	MIRc	SINE/MIR	191	268	(0)	269750
16	23.0	0.0	0.0	chr1	182614833	182614873	(66341549)	+	G-rich	Low_complexity	1	41	(0)	269752
383	30.7	9.7	5.8	chr1	182616033	182616340	(66340082)	C	MLT1N2	LTR/ERVL-MaLR	(31)	531	211	269756
2596	13.2	13.7	0.0	chr1	183346413	183346852	(65609570)	+	LTR54	LTR/ERV1	1	510	(0)	270973
18	23.7	0.0	6.8	chr1	183472319	183472363	(65484059)	+	(CCCTCT)n	Simple_repeat	1	70	(0)	271188
17	18.8	0.0	0.0	chr1	183472364	183472394	(65484028)	+	(C)n	Simple_repeat	1	31	(0)	271189
210	26.7	8.5	0.0	chr1	185318271	185318345	(63638077)	C	AmnSINE1	SINE/5S-Deu-L2	(197)	378	297	274054
480	29.3	3.1	2.5	chr1	186195390	186195550	(62760872)	C	MIRb	SINE/MIR	(89)	179	18	275261
1908	17.4	8.4	1.3	chr1	192797867	192798261	(56158161)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	283873
6214	29.0	8.4	3.7	chr1	192985411	192986727	(55969695)	C	L2a	LINE/L2	(1)	3425	2095	284178
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
1713	8.0	15.0	0.0	chr1	196494400	196494637	(52461785)	C	AluY	SINE/Alu	(12)	299	20	288732
210	36.9	6.9	3.2	chr1	196494639	196494792	(52461630)	+	L3	LINE/CR1	3624	3783	(316)	288733
1571	15.3	7.5	0.0	chr1	197939182	197939442	(51016980)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	67	290541
3319	9.3	0.2	4.6	chr1	197939443	197939843	(51016579)	C	L1PA13	LINE/L1	(2)	6161	5781	290542
1447	23.5	8.8	9.3	chr1	198079256	198079956	(50876466)	C	MER61E	LTR/ERV1	(0)	779	14	290741
276	30.4	0.0	0.0	chr1	198668982	198669060	(50287362)	+	MADE2	DNA/TcMar-Mariner	2	80	(0)	291540
220	32.3	1.0	6.8	chr1	201170595	201170697	(47785725)	C	L2b	LINE/L2	(7)	3419	3310	295611
574	27.6	6.2	0.7	chr1	202347931	202348083	(46608339)	C	MIRb	SINE/MIR	(6)	262	101	297739
15	5.6	0.0	0.0	chr1	203726422	203726440	(45229982)	+	(T)n	Simple_repeat	1	19	(0)	300184
2940	17.9	3.9	0.6	chr1	204172039	204172561	(44783861)	+	MER87	LTR/ERV1	1	541	(0)	301120
2124	7.6	7.1	0.3	chr1	204515678	204515965	(44440457)	C	AluSq2	SINE/Alu	(2)	311	3	301691
380	27.2	6.5	11.4	chr1	204515966	204516016	(44440406)	C	L3	LINE/CR1	(391)	3708	3665	301689
12	20.4	0.0	0.0	chr1	204672677	204672705	(44283717)	+	(CTCC)n	Simple_repeat	1	29	(0)	302048
353	27.3	8.6	0.0	chr1	204711350	204711477	(44244945)	+	MIR3	SINE/MIR	62	201	(7)	302112
327	28.2	12.1	0.8	chr1	204711488	204711612	(44244810)	+	MIRb	SINE/MIR	125	265	(3)	302113
18	23.3	5.4	4.1	chr1	206501248	206501340	(42455082)	+	(GAGAGAT)n	Simple_repeat	1	98	(0)	305196
512	24.8	3.6	2.2	chr1	206503596	206503731	(42452691)	+	MLT1I	LTR/ERVL-MaLR	6	143	(268)	305202
454	27.0	5.5	0.0	chr1	206503813	206503949	(42452473)	+	MLT1I	LTR/ERVL-MaLR	267	411	(0)	305202
17	17.3	5.3	4.2	chr1	206556820	206556878	(42399544)	+	G-rich	Low_complexity	1	59	(0)	305297
449	25.5	0.0	1.8	chr1	206575684	206575795	(42380627)	C	MIR3	SINE/MIR	(14)	194	85	305329
357	23.6	22.4	0.2	chr1	207027982	207028147	(41928275)	+	MIRb	SINE/MIR	6	224	(44)	306101
185	33.7	12.5	0.0	chr1	207309833	207309930	(41646492)	C	L2b	LINE/L2	(294)	3081	2970	306463
280	16.7	0.0	0.0	chr1	207312022	207312069	(41644353)	+	LTR8	LTR/ERV1	1	48	(772)	306468
2885	21.2	2.8	4.9	chr1	207312071	207312761	(41643661)	+	LTR8	LTR/ERV1	16	691	(0)	306468
2166	16.7	1.4	4.7	chr1	207520092	207520538	(41435884)	+	MER54A	LTR/ERVL	3	434	(467)	306770
14	24.5	4.6	1.5	chr1	207626741	207626755	(41329667)	+	(AATAA)n	Simple_repeat	1	16	(0)	306929
2325	12.9	0.0	0.0	chr1	207626756	207627057	(41329365)	+	AluSq	SINE/Alu	1	302	(11)	306930
2007	17.6	7.5	0.5	chr1	207743986	207744395	(41212027)	C	LTR8	LTR/ERV1	(250)	441	1	307097
4873	9.9	3.9	5.2	chr1	207744396	207745208	(41211214)	+	HUERS-P3b-int	LTR/ERV1	3073	3874	(3544)	307095
1324	15.8	8.1	0.4	chr1	207826211	207826439	(41129983)	C	LTR9B	LTR/ERV1	(0)	644	397	307174
2116	11.8	0.3	0.7	chr1	209645435	209645738	(39310684)	+	AluSz	SINE/Alu	1	303	(9)	309982
195	31.1	3.6	4.5	chr1	209645999	209646109	(39310313)	+	X6A_LINE	LINE/CR1	841	950	(130)	309983
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
15	18.4	2.1	4.2	chr1	211259610	211259656	(37696766)	+	(CGGCAG)n	Simple_repeat	1	48	(0)	312390
14	4.8	0.0	4.2	chr1	211259634	211259657	(37696765)	+	(CGG)n	Simple_repeat	1	24	(0)	312391
19	0.0	6.7	0.0	chr1	211382660	211382689	(37573733)	+	(CCCCT)n	Simple_repeat	1	32	(0)	312613
13	17.7	5.3	0.0	chr1	211613345	211613382	(37343040)	+	(TGAGAG)n	Simple_repeat	1	40	(0)	313045
2349	10.3	0.3	1.3	chr1	212363419	212363730	(36592692)	+	AluSz	SINE/Alu	1	309	(3)	314396
1793	17.5	11.1	3.1	chr1	212478011	212478420	(36478002)	C	LTR54B	LTR/ERV1	(44)	454	2	314582
407	27.8	3.1	2.3	chr1	212478475	212478603	(36477819)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	433	314585
3389	16.2	6.4	1.6	chr1	213017058	213017484	(35938938)	C	Tigger17a	DNA/TcMar-Tigger	(1)	653	215	315581
247	34.3	12.7	2.8	chr1	213049189	213049506	(35906916)	C	L2	LINE/L2	(1139)	2280	1927	315634
12	16.1	3.5	0.0	chr1	213049568	213049596	(35906826)	+	GA-rich	Low_complexity	1	30	(0)	315635
422	30.5	14.5	9.6	chr1	213049607	213049813	(35906609)	+	L2c	LINE/L2	3068	3318	(69)	315636
4113	11.7	0.7	1.9	chr1	221714229	221714848	(27241574)	+	LTR9	LTR/ERV1	1	612	(0)	328063
2406	18.4	4.9	6.0	chr1	221962160	221962675	(26993747)	C	LTR54	LTR/ERV1	(0)	510	1	328437
211	40.0	2.8	0.9	chr1	222906192	222906297	(26050125)	+	MamSINE1	SINE/tRNA-RTE	115	222	(68)	329880
3930	8.7	0.4	1.8	chr1	222906370	222906919	(26049503)	+	MER41A	LTR/ERV1	4	545	(9)	329881
3965	7.5	1.1	3.5	chr1	223732186	223732753	(25223669)	C	MER41A	LTR/ERV1	(0)	554	1	331128
2722	16.7	2.9	5.4	chr1	223732754	223733021	(25223401)	C	LTR75_1	LTR/ERV1	(264)	282	4	331127
4438	6.0	1.1	2.5	chr1	225466588	225467028	(23489394)	C	MER41A	LTR/ERV1	(116)	438	1	334015
11	7.4	10.3	0.0	chr1	225928519	225928547	(23027875)	+	(CTGCTT)n	Simple_repeat	1	32	(0)	334828
349	35.8	8.5	1.9	chr1	226002404	226002665	(22953757)	+	MamRTE1	LINE/RTE-BovB	3478	3758	(54)	334985
1118	28.1	10.3	6.9	chr1	227396016	227396317	(21560105)	+	L2c	LINE/L2	2018	2306	(1113)	337451
2266	10.9	0.0	0.0	chr1	227396318	227396610	(21559812)	C	AluSz	SINE/Alu	(19)	293	1	337452
19	31.2	4.0	1.0	chr1	228407064	228407163	(20549259)	+	G-rich	Low_complexity	1	104	(0)	338660
4058	13.4	2.0	1.0	chr1	230138555	230139059	(18817363)	C	MER41B	LTR/ERV1	(122)	512	2	341466
4518	7.1	0.7	0.0	chr1	230151683	230152232	(18804190)	C	MER41A	LTR/ERV1	(0)	554	1	341476
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
227	17.8	0.0	0.0	chr1	231529925	231529969	(17426453)	C	MLT1F1	LTR/ERVL-MaLR	(84)	464	420	343649
992	25.2	4.2	1.8	chr1	231530053	231530331	(17426091)	C	MLT1F1	LTR/ERVL-MaLR	(283)	286	1	343649
38	0.0	0.0	0.0	chr1	234491193	234491225	(14465197)	+	(AC)n	Simple_repeat	1	33	(0)	347951
23	12.6	0.0	0.0	chr1	234491226	234491260	(14465162)	+	(GA)n	Simple_repeat	1	35	(0)	347952
240	32.2	2.5	0.0	chr1	234583844	234583958	(14372464)	+	Eulor6E	DNA?	70	187	(105)	348133
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
525	23.4	8.1	5.4	chr1	234723214	234723380	(14233042)	C	Eulor10	DNA?	(71)	249	78	348333
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
12	14.4	0.0	0.0	chr1	234724911	234724934	(14231488)	+	(GAGG)n	Simple_repeat	1	24	(0)	348336
783	27.1	2.7	1.1	chr1	234870104	234870308	(14086114)	C	MIR	SINE/MIR	(1)	229	30	348574
298	29.0	10.8	1.8	chr1	234871062	234871170	(14085252)	C	MIRc	SINE/MIR	(42)	226	107	348575
382	31.4	6.3	2.5	chr1	234871253	234871451	(14084971)	C	MIRb	SINE/MIR	(57)	211	5	348576
222	28.3	11.7	7.0	chr1	234874713	234874826	(14081596)	C	L3	LINE/CR1	(12)	4087	3968	348584
504	30.1	13.3	2.7	chr1	234875130	234875505	(14080917)	+	L1MC5a	LINE/L1	2352	2773	(4)	348585
399	29.9	5.6	3.0	chr1	234980616	234980877	(13975545)	C	AmnSINE1	SINE/5S-Deu-L2	(195)	380	112	348770
299	31.2	1.8	0.9	chr1	235012344	235012456	(13943966)	+	MIRc	SINE/MIR	120	233	(35)	348833
14	12.2	8.2	3.8	chr1	235588828	235588876	(13367546)	+	(CCACT)n	Simple_repeat	1	53	(0)	350049
2680	14.5	11.3	3.9	chr1	235589033	235589593	(13366829)	+	LTR18B	LTR/ERVL	1	608	(6)	350050
4874	6.0	6.8	9.6	chr1	236349320	236349832	(12606590)	C	MER4E	LTR/ERV1	(0)	766	276	351439
2138	11.9	2.3	0.0	chr1	236349833	236350127	(12606295)	+	AluSx	SINE/Alu	4	305	(7)	351440
4051	11.5	0.8	2.0	chr1	236351728	236352219	(12604203)	C	MER41E	LTR/ERV1	(99)	496	1	351444
1369	13.1	3.3	3.7	chr1	236352220	236352422	(12604000)	C	LTR54	LTR/ERV1	(306)	204	1	351441
1827	17.0	0.0	3.5	chr1	236352423	236352565	(12603857)	+	AluJr	SINE/Alu	1	141	(171)	351446
271	26.0	7.2	13.3	chr1	236794616	236794810	(12161612)	+	L2b	LINE/L2	3195	3376	(11)	352266
257	27.5	11.8	7.8	chr1	236794837	236794990	(12161432)	C	MIRc	SINE/MIR	(24)	244	84	352267
4382	12.6	0.0	0.3	chr1	241696323	241696958	(7259464)	C	MER41B	LTR/ERV1	(0)	634	1	359670
16	15.3	2.0	6.0	chr1	244048506	244048554	(4907868)	+	GA-rich	Low_complexity	1	50	(0)	363520
34	19.5	0.0	0.0	chr1	244048593	244048664	(4907758)	+	(C)n	Simple_repeat	1	72	(0)	363521
26	27.2	3.7	1.8	chr1	244048665	244048698	(4907724)	+	(CGCC)n	Simple_repeat	4	113	(0)	363522
2342	13.8	6.3	0.0	chr1	244325035	244325405	(4631017)	C	MER57B1	LTR/ERV1	(5)	396	1	363977
11793	14.8	7.4	5.3	chr1	244393580	244394239	(4562183)	C	ERVL-int	LTR/ERVL	(1829)	3928	3285	364132
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
2054	17.6	18.7	3.7	chr1	246110332	246110849	(2845573)	C	LTR18B	LTR/ERVL	(0)	614	1	366955
2729	20.4	9.0	0.7	chr1	246142102	246142773	(2813649)	C	MER44C	DNA/TcMar-Tigger	(0)	733	1	367012
46	0.0	0.0	0.0	chr1	246143127	246143165	(2813257)	+	(AC)n	Simple_repeat	1	39	(0)	367013
44	0.0	0.0	0.0	chr1	246821368	246821405	(2135017)	+	(AC)n	Simple_repeat	1	38	(0)	368156
1819	20.6	2.9	5.8	chr1	247360635	247361066	(1595356)	C	LTR49-int	LTR/ERV1	(4243)	2088	1670	369008
182	19.2	10.3	0.0	chr1	247361153	247361204	(1595218)	C	OldhAT1	DNA/hAT-Ac	(869)	1979	1922	369021
2194	19.4	6.4	13.9	chr1	247367537	247367831	(1588591)	C	LTR49-int	LTR/ERV1	(5852)	479	204	369022
1608	16.7	1.9	2.2	chr1	247367833	247367906	(1588516)	+	AluJb	SINE/Alu	1	74	(238)	369034
4117	13.4	1.1	1.3	chr1	247367907	247368541	(1587881)	+	MER41B	LTR/ERV1	1	634	(0)	369035
2544	20.9	6.5	4.8	chr1	247374735	247374850	(1581572)	+	LTR8A	LTR/ERV1	1	124	(603)	369051
4700	11.6	2.3	2.2	chr1	247374851	247375540	(1580882)	+	LTR8	LTR/ERV1	1	691	(0)	369052
241	22.8	0.0	3.4	chr10	3890734	3890792	(129906630)	+	MER102b	DNA/hAT-Charlie	283	339	(2)	375714
4359	11.5	1.4	0.6	chr10	3890830	3891458	(129905964)	+	MER41B	LTR/ERV1	1	634	(0)	375715
3987	7.7	2.4	0.2	chr10	4866728	4867249	(128930173)	C	LTR8	LTR/ERV1	(157)	534	1	377027
1475	26.2	9.0	0.7	chr10	4867250	4867706	(128929716)	C	L1MD2	LINE/L1	(139)	6220	5722	377029
3434	15.2	1.2	0.5	chr10	9825470	9826030	(123971392)	+	MER61E	LTR/ERV1	1	565	(4)	384785
4147	10.3	1.9	4.6	chr10	15627751	15628324	(118169098)	+	MER41B	LTR/ERV1	1	570	(64)	394578
2706	18.6	2.5	0.2	chr10	17425839	17426344	(116371078)	+	LTR53	LTR/ERVL	2	519	(0)	397359
779	26.0	4.0	1.8	chr10	17662596	17662818	(116134604)	+	MIR	SINE/MIR	6	233	(29)	397832
3374	10.1	0.9	0.2	chr10	21041658	21042112	(112755310)	C	MER41B	LTR/ERV1	(91)	543	86	402888
627	26.5	9.7	0.5	chr10	21042127	21042323	(112755099)	C	MIR	SINE/MIR	(0)	262	46	402889
1890	22.9	2.8	0.5	chr10	21042332	21042757	(112754665)	+	MER63B	DNA/hAT-Blackjack	1	436	(0)	402890
12	8.8	4.2	0.0	chr10	21174159	21174182	(112623240)	+	(CCG)n	Simple_repeat	1	25	(0)	403080
12	36.1	0.0	2.6	chr10	21534011	21534087	(112263335)	+	(CCCGCG)n	Simple_repeat	1	77	(0)	403878
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
533	21.6	12.7	3.5	chr10	23047575	23047813	(110749609)	C	MER34A1	LTR/ERV1	(48)	739	302	406182
13	20.1	0.0	2.8	chr10	26755774	26755809	(107041613)	+	A-rich	Low_complexity	1	36	(0)	412249
18	0.0	0.0	6.7	chr10	26755866	26755895	(107041527)	+	(AAACA)n	Simple_repeat	1	30	(0)	412250
851	15.3	0.7	3.5	chr10	27241586	27241729	(106555693)	+	FLAM_C	SINE/Alu	1	140	(3)	413146
2155	11.8	0.0	0.7	chr10	28811491	28811787	(104985635)	C	AluSx1	SINE/Alu	(17)	295	1	415793
4301	12.5	1.7	0.2	chr10	28811807	28812430	(104984992)	+	MER41B	LTR/ERV1	1	634	(0)	415794
183	29.8	4.1	0.0	chr10	28812437	28812483	(104984939)	+	L2a	LINE/L2	3375	3423	(3)	415795
4044	10.9	4.7	1.6	chr10	30425042	30425534	(103371888)	C	MER41B	LTR/ERV1	(113)	521	1	418689
1125	21.8	7.7	8.2	chr10	30425535	30425843	(103371579)	+	MLT1A0	LTR/ERVL-MaLR	68	363	(2)	418688
17	16.7	2.4	2.3	chr10	32056201	32056242	(101741180)	+	(GGC)n	Simple_repeat	1	43	(0)	421235
332	34.0	5.6	3.6	chr10	32971726	32971917	(100825505)	+	L3b	LINE/CR1	4770	4965	(267)	422549
343	19.4	19.9	5.2	chr10	43402290	43402463	(90394959)	C	L1MEj	LINE/L1	(1070)	1090	885	433419
540	15.1	12.5	0.8	chr10	43402464	43402583	(90394839)	+	MLT1B	LTR/ERVL-MaLR	255	390	(0)	433420
28	11.6	4.6	3.7	chr10	43409350	43409420	(90388002)	+	G-rich	Low_complexity	1	71	(0)	433437
1108	14.0	0.6	0.0	chr10	43409548	43409711	(90387711)	+	AluJb	SINE/Alu	137	301	(11)	433438
1132	17.3	3.0	0.7	chr10	43418047	43418377	(90379045)	+	MER74C	LTR/ERVL	13	430	(128)	433460
1853	12.8	1.4	3.6	chr10	43418428	43418731	(90378691)	+	AluSz	SINE/Alu	8	304	(8)	433461
4627	10.8	1.1	0.2	chr10	45410801	45411428	(88385994)	C	MER41B	LTR/ERV1	(0)	634	1	436025
2202	11.5	0.0	0.7	chr10	46003865	46004159	(87793263)	+	AluSx	SINE/Alu	1	293	(19)	437009
394	28.3	12.1	4.4	chr10	49183586	49183814	(84613608)	+	MIR	SINE/MIR	2	250	(12)	441551
481	29.6	11.9	3.8	chr10	49183920	49184960	(84612462)	+	L1ME3G	LINE/L1	1	599	(398)	441552
1103	29.4	8.5	1.6	chr10	50324676	50325280	(83472142)	+	L1MC5a	LINE/L1	2116	2765	(12)	443190
518	30.5	11.3	6.7	chr10	50331995	50332415	(83465007)	+	L2b	LINE/L2	2766	3215	(160)	443197
246	31.1	4.2	0.0	chr10	58384868	58384957	(75412465)	C	MER5A	DNA/hAT-Charlie	(36)	153	60	454064
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
17	24.9	1.9	0.0	chr10	68560198	68560249	(65237173)	+	G-rich	Low_complexity	1	53	(0)	469546
12	0.0	4.3	4.2	chr10	69123850	69123872	(64673550)	+	(TCCT)n	Simple_repeat	1	24	(0)	470925
299	32.4	9.7	4.2	chr10	69316188	69316548	(64480874)	C	L2	LINE/L2	(459)	2960	2578	471354
2666	13.0	0.2	0.2	chr10	69410648	69411056	(64386366)	+	LTR47B2	LTR/ERVL	1	409	(25)	471539
3229	19.9	3.4	2.5	chr10	70575722	70576429	(63220993)	C	MER72	LTR/ERV1	(0)	722	9	473743
471	26.1	3.2	0.0	chr10	70576435	70576553	(63220869)	+	LTR16B1	LTR/ERVL	309	431	(49)	473742
796	29.7	6.5	7.9	chr10	70580201	70581136	(63216286)	C	L1ME3G	LINE/L1	(1438)	5099	4213	473746
4718	9.7	1.9	0.0	chr10	70590200	70590821	(63206601)	C	MER41B	LTR/ERV1	(0)	634	1	473772
664	33.9	3.3	4.8	chr10	70596864	70597235	(63200187)	+	Charlie8	DNA/hAT-Charlie	26	391	(2037)	473788
386	24.6	6.5	2.3	chr10	71747731	71747863	(62049559)	C	MER117	DNA/hAT-Charlie	(0)	197	59	475833
13	13.1	0.0	7.7	chr10	71747959	71747997	(62049425)	+	G-rich	Low_complexity	1	39	(0)	475834
13	8.8	7.5	4.7	chr10	71748723	71748762	(62048660)	+	(GCACCCCA)n	Simple_repeat	1	43	(0)	475836
356	31.0	1.7	0.0	chr10	71753872	71753984	(62043438)	C	MIRb	SINE/MIR	(34)	234	120	475841
17	10.7	4.5	4.3	chr10	72260962	72261005	(61536417)	+	(CCCCTC)n	Simple_repeat	1	46	(0)	476891
648	15.7	1.9	1.9	chr10	72276704	72276811	(61520611)	+	FLAM_A	SINE/Alu	21	128	(14)	476924
193	28.8	1.5	8.3	chr10	72276824	72276895	(61520527)	+	MIR3	SINE/MIR	113	179	(29)	476925
249	24.3	9.5	2.7	chr10	72298708	72298821	(61498601)	C	MIRc	SINE/MIR	(49)	219	93	476991
1430	16.9	10.2	0.3	chr10	73000004	73000329	(60797093)	C	L1M4c	LINE/L1	(545)	6236	5875	478420
819	16.5	10.9	1.4	chr10	73000324	73000513	(60796909)	C	L1M4c	LINE/L1	(1317)	5424	5211	478420
987	23.0	10.7	6.1	chr10	73000514	73000888	(60796534)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	478421
819	16.5	10.9	1.4	chr10	73000889	73000912	(60796510)	C	L1M4c	LINE/L1	(1531)	5210	5187	478420
643	19.8	9.2	1.5	chr10	73000907	73001104	(60796318)	C	L1M4c	LINE/L1	(3838)	2903	2683	478420
1617	18.4	5.1	0.0	chr10	73001105	73001381	(60796041)	C	AluJr	SINE/Alu	(19)	293	2	478422
765	26.1	5.8	2.6	chr10	73097406	73097637	(60699785)	+	MIRb	SINE/MIR	19	258	(10)	478602
401	30.4	13.6	2.6	chr10	73456173	73456466	(60340956)	C	L2c	LINE/L2	(12)	3363	3055	479318
1482	16.2	4.2	4.2	chr10	73456498	73456858	(60340564)	+	L1MB8	LINE/L1	4807	5167	(979)	479319
3521	17.0	2.8	7.0	chr10	73742860	73743582	(60053840)	C	LTR8	LTR/ERV1	(0)	691	1	479874
273	25.6	3.5	4.7	chr10	73743583	73743617	(60053805)	+	L2a	LINE/L2	3392	3426	(0)	479873
1505	16.6	2.1	8.0	chr10	73774398	73774698	(60022724)	+	AluJr4	SINE/Alu	1	283	(29)	479921
7841	4.5	0.4	0.0	chr10	73930686	73931640	(59865782)	C	LTR13A	LTR/ERVK	(0)	966	8	480193
210	33.6	16.8	3.0	chr10	74021058	74021287	(59776135)	+	L2c	LINE/L2	3015	3282	(105)	480410
3889	13.4	3.1	2.1	chr10	74179295	74179921	(59617501)	+	MER41B	LTR/ERV1	1	634	(0)	480714
1980	13.6	10.0	10.0	chr10	74246309	74246798	(59550624)	C	LTR54	LTR/ERV1	(0)	510	21	480853
1619	15.1	5.8	1.4	chr10	75209596	75209712	(58587710)	C	AluJb	SINE/Alu	(178)	134	1	482669
1953	16.7	15.5	2.5	chr10	75209713	75209895	(58587527)	C	LTR54	LTR/ERV1	(331)	179	1	482668
1235	23.2	13.1	3.3	chr10	77971356	77971810	(55825612)	+	MLT1J	LTR/ERVL-MaLR	4	509	(3)	486935
12	19.6	0.0	0.0	chr10	78973519	78973547	(54823875)	+	(CAGCC)n	Simple_repeat	1	29	(0)	488802
1988	11.8	0.0	0.0	chr10	84525091	84525370	(49272052)	+	MER61E	LTR/ERV1	1	280	(289)	496993
6224	6.8	3.2	0.5	chr10	84525371	84526129	(49271293)	C	LTR17	LTR/ERV1	(0)	780	1	496994
2972	18.0	5.2	4.3	chr10	89354864	89355428	(44441994)	C	LTR8A	LTR/ERV1	(153)	574	1	504239
540	10.6	0.0	1.5	chr10	89355429	89355508	(44441914)	+	MER72	LTR/ERV1	653	764	(4)	504247
1835	19.8	10.8	9.0	chr10	89355504	89355523	(44441899)	C	MER21C	LTR/ERVL	(365)	573	556	504248
4085	12.8	2.5	3.7	chr10	89355524	89356165	(44441257)	+	MER41B	LTR/ERV1	1	634	(0)	504249
1667	26.8	4.6	2.1	chr10	98323120	98323652	(35473770)	+	MLT1H	LTR/ERVL-MaLR	3	549	(0)	519716
7601	7.5	0.9	0.2	chr10	102454375	102455335	(31342087)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	526959
1092	13.5	2.9	4.5	chr10	102455336	102455452	(31341970)	C	AluJb	SINE/Alu	(66)	246	134	526958
897	14.5	0.0	0.0	chr10	102455453	102455576	(31341846)	C	AluJo	SINE/Alu	(188)	124	1	526960
20	18.0	0.0	5.4	chr10	102643549	102643604	(31153818)	+	G-rich	Low_complexity	1	56	(0)	527308
21	12.9	2.2	2.2	chr10	110920513	110920557	(22876865)	+	(TCTT)n	Simple_repeat	1	46	(0)	540374
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
4200	9.6	0.4	0.0	chr10	119687865	119688416	(14109006)	C	MER41A	LTR/ERV1	(0)	554	1	554382
927	26.4	19.1	2.6	chr10	119688417	119688428	(14108994)	+	L1MEg	LINE/L1	608	618	(5624)	554381
875	20.5	8.7	1.5	chr10	119688429	119688631	(14108791)	C	MER20	DNA/hAT-Charlie	(0)	219	1	554383
496	20.9	0.7	7.6	chr10	123942005	123942149	(9855273)	+	LTR37A	LTR/ERV1	50	184	(242)	561136
3726	13.6	2.1	2.1	chr10	123942233	123942855	(9854567)	+	MER41B	LTR/ERV1	1	623	(11)	561137
7894	6.8	1.5	1.8	chr10	133304589	133305598	(491824)	+	LTR13	LTR/ERVK	1	1007	(0)	572360
222	37.7	7.8	0.3	chr10	133305860	133306056	(491366)	+	MIRb	SINE/MIR	21	247	(21)	572361
1791	13.3	3.0	3.0	chr11	349106	349504	(134737118)	C	MER41-int	LTR/ERV1	(3974)	3842	3468	573310
393	6.1	6.8	0.0	chr11	349505	350170	(134736452)	+	(AC)n	Simple_repeat	1	711	(0)	573311
4069	8.4	1.4	2.1	chr11	352134	352592	(134734030)	C	MER41A	LTR/ERV1	(99)	455	1	573310
2468	9.4	6.4	0.0	chr11	352761	353111	(134733511)	+	MER51B	LTR/ERV1	1	375	(2)	573314
4517	4.9	1.1	0.0	chr11	3509348	3509899	(131576723)	C	LTR6B	LTR/ERV1	(0)	558	1	577132
2298	11.1	0.0	0.3	chr11	3509900	3510216	(131576406)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	577133
1100	23.5	11.2	1.5	chr11	5247162	5247498	(129839124)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	579783
908	12.0	0.0	0.0	chr11	5288184	5288316	(129798306)	C	LTR4	LTR/ERV1	(418)	178	46	579832
57	0.0	0.0	5.8	chr11	5596493	5596561	(129490061)	+	(CCCTTCC)n	Simple_repeat	1	69	(0)	580207
13	15.8	2.7	2.6	chr11	8682939	8682975	(126403647)	+	G-rich	Low_complexity	1	38	(0)	584338
6532	9.6	4.9	0.9	chr11	9318776	9319704	(125766918)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	585472
4081	14.0	5.5	1.3	chr11	9319705	9320031	(125766591)	C	MER50	LTR/ERV1	(391)	343	1	585471
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
588	33.6	8.3	5.4	chr11	12149088	12149866	(122936756)	C	L2c	LINE/L2	(266)	3121	2310	590330
301	30.6	6.1	1.1	chr11	12149958	12150145	(122936477)	C	L2c	LINE/L2	(1366)	2053	1856	590330
575	5.1	2.5	0.0	chr11	17073956	17074033	(118012589)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	597993
2411	10.9	0.0	0.3	chr11	18691305	18691617	(116395005)	+	AluSx1	SINE/Alu	1	312	(0)	601037
3273	12.9	0.0	3.3	chr11	18691622	18692143	(116394479)	+	MER41B	LTR/ERV1	17	521	(113)	601026
2317	28.4	7.7	7.2	chr11	43952820	43953061	(91133561)	+	MLT1J2-int	LTR/ERVL-MaLR	920	1141	(246)	639257
4178	11.0	3.5	1.6	chr11	43953062	43953233	(91133389)	+	MER41B	LTR/ERV1	1	169	(465)	639261
2287	9.8	0.3	2.9	chr11	43953234	43953540	(91133082)	+	AluSg4	SINE/Alu	2	300	(10)	639262
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
1766	14.4	2.6	8.7	chr11	47200778	47201110	(87885512)	+	AluJr	SINE/Alu	1	312	(0)	645435
334	27.2	13.0	0.0	chr11	47201138	47201251	(87885371)	C	L2c	LINE/L2	(227)	3160	3030	645431
2036	12.6	3.6	0.0	chr11	47201372	47201664	(87884958)	+	AluSx1	SINE/Alu	1	304	(8)	645436
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
2148	9.5	1.0	1.0	chr11	47767753	47768046	(87318576)	+	AluSg4	SINE/Alu	2	295	(15)	646697
16	9.7	0.0	0.0	chr11	47847635	47847664	(87238958)	+	(G)n	Simple_repeat	1	30	(0)	646890
227	23.7	5.0	7.3	chr11	57657196	57657277	(77429345)	C	L2a	LINE/L2	(0)	3426	3347	654218
4225	9.2	0.0	0.4	chr11	57911171	57911726	(77174896)	C	MER41A	LTR/ERV1	(0)	554	1	654679
4278	14.0	3.0	0.9	chr11	59545239	59545914	(75540708)	C	LTR8	LTR/ERV1	(0)	691	1	656933
296	32.0	13.9	2.7	chr11	59545915	59546086	(75540536)	C	L2	LINE/L2	(768)	2651	2455	656932
15	18.3	0.0	2.6	chr11	59706870	59706908	(75379714)	+	A-rich	Low_complexity	1	39	(0)	657271
3242	8.6	0.2	0.0	chr11	59706910	59707327	(75379295)	+	LTR3	LTR/ERVK	5	423	(9)	657272
257	15.6	4.2	0.0	chr11	59960449	59960493	(75126129)	+	L1MD	LINE/L1	5544	5590	(2405)	657715
911	19.1	4.1	3.2	chr11	59960486	59960503	(75126119)	+	L1MB5	LINE/L1	5626	5643	(531)	657710
2449	22.1	1.6	0.2	chr11	59960504	59961014	(75125608)	+	LTR53	LTR/ERVL	1	518	(1)	657716
20	17.8	1.6	6.2	chr11	61541666	61541734	(73544888)	+	GA-rich	Low_complexity	1	65	(0)	660379
2144	14.1	8.4	2.9	chr11	61814447	61814862	(73271760)	C	LTR12B	LTR/ERV1	(226)	441	1	660878
315	32.1	10.4	7.0	chr11	61841555	61841778	(73244844)	+	L4_C_Mam	LINE/RTE-X	4883	5138	(0)	660923
546	30.7	11.2	7.4	chr11	61969709	61970639	(73115983)	+	L1M5	LINE/L1	4302	5272	(874)	661190
2377	8.9	0.0	0.0	chr11	61970678	61970969	(73115653)	C	AluSq	SINE/Alu	(21)	292	1	661191
39	0.0	0.0	0.0	chr11	61972141	61972176	(73114446)	+	(GGAG)n	Simple_repeat	1	36	(0)	661194
1027	14.1	10.7	1.8	chr11	62013900	62014069	(73072553)	+	AluJo	SINE/Alu	1	187	(125)	661269
3457	11.3	6.2	4.7	chr11	62014071	62014509	(73072113)	+	MER41B	LTR/ERV1	11	433	(201)	661270
2267	10.2	0.3	0.3	chr11	62041758	62042052	(73044570)	C	AluSx1	SINE/Alu	(17)	295	1	661345
3480	17.1	1.7	7.2	chr11	62428724	62429455	(72657167)	C	LTR8	LTR/ERV1	(0)	691	1	662056
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
8930	1.6	0.0	0.0	chr11	63530314	63531281	(71555341)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	663822
1967	17.5	9.9	5.2	chr11	63531292	63531754	(71554868)	C	MER66C	LTR/ERV1	(67)	488	2	663823
931	13.4	0.0	0.0	chr11	64270649	64270782	(70815840)	+	FRAM	SINE/Alu	1	134	(42)	665282
315	33.1	11.4	1.8	chr11	64917652	64917817	(70168805)	C	MIRb	SINE/MIR	(32)	236	53	666432
238	19.4	7.5	0.0	chr11	65428532	65428593	(69658029)	+	MamRep4096	DNA/hAT-Tip100	68	134	(292)	667514
450	30.8	13.7	5.0	chr11	65428988	65429477	(69657145)	C	L1ME4a	LINE/L1	(251)	5873	5367	667515
303	37.1	2.0	2.0	chr11	65496409	65496554	(69590068)	+	MIR3	SINE/MIR	1	146	(62)	667661
16	21.3	0.0	0.0	chr11	65496685	65496717	(69589905)	+	A-rich	Low_complexity	1	33	(0)	667662
13	8.5	4.0	0.0	chr11	65500555	65500579	(69586043)	+	(GAAG)n	Simple_repeat	1	26	(0)	667664
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
333	35.4	11.4	2.5	chr11	65888990	65889427	(69197195)	+	L2c	LINE/L2	2328	2809	(610)	668356
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
12	18.3	0.0	3.0	chr11	67373840	67373872	(67712750)	+	(CGAGG)n	Simple_repeat	1	33	(0)	671519
13	18.6	3.6	6.9	chr11	67374065	67374120	(67712502)	+	(CCT)n	Simple_repeat	1	58	(0)	671520
401	28.0	11.8	6.3	chr11	67436475	67436928	(67649694)	+	L2a	LINE/L2	2873	3380	(7)	671640
2242	12.0	0.0	0.3	chr11	71712560	71712876	(63373746)	+	HERVS71-int	LTR/ERV1	8594	8909	(69)	678661
4505	4.9	1.4	0.0	chr11	71712877	71713426	(63373196)	+	LTR6B	LTR/ERV1	1	558	(0)	678662
2297	8.5	0.0	1.0	chr11	72815974	72816278	(62270344)	C	AluY	SINE/Alu	(8)	303	2	680657
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
39	0.0	0.0	0.0	chr11	73598518	73598553	(61488069)	+	(TCTCTCCC)n	Simple_repeat	1	36	(0)	682200
511	29.2	2.2	1.1	chr11	74011592	74011752	(61074870)	C	MIRb	SINE/MIR	(5)	263	100	683223
17	13.7	0.0	0.0	chr11	75445547	75445578	(59641044)	+	(GAGG)n	Simple_repeat	1	32	(0)	686063
2145	19.5	8.0	1.3	chr11	75803535	75804262	(59282360)	C	L1M4	LINE/L1	(3493)	3151	2313	686788
588	16.3	0.0	0.0	chr11	76823449	76823540	(58263082)	C	AluJb	SINE/Alu	(13)	299	208	688740
919	10.9	0.0	0.0	chr11	77053445	77053572	(58033050)	+	MER41B	LTR/ERV1	1	128	(506)	689174
35	9.4	0.0	8.5	chr11	77474131	77474212	(57612410)	+	(CCCCTC)n	Simple_repeat	1	82	(0)	689967
15	13.7	3.1	0.0	chr11	77474212	77474243	(57612379)	+	(CGG)n	Simple_repeat	1	33	(0)	689968
351	28.6	5.8	6.6	chr11	78290669	78290911	(56795711)	+	L3	LINE/CR1	3755	3995	(104)	691748
1505	12.2	3.6	2.7	chr11	86145966	86146187	(48940435)	+	AluSx	SINE/Alu	1	224	(88)	705018
705	25.3	8.7	1.8	chr11	86246759	86246983	(48839639)	+	MIR	SINE/MIR	18	259	(3)	705225
359	16.2	9.2	4.8	chr11	86937190	86937293	(48149329)	C	Charlie4z	DNA/hAT-Charlie	(0)	167	59	706349
4277	5.8	3.2	0.0	chr11	86937365	86937900	(48148722)	+	MER41A	LTR/ERV1	1	554	(0)	706350
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
1975	16.1	0.9	0.3	chr11	95506075	95506404	(39580218)	+	MER44B	DNA/TcMar-Tigger	17	348	(202)	718731
860	12.2	1.3	2.0	chr11	95506396	95506545	(39580077)	+	Tigger7	DNA/TcMar-Tigger	2343	2491	(0)	718732
246	32.6	8.4	2.2	chr11	95542764	95542942	(39543680)	+	LTR16C	LTR/ERVL	87	277	(212)	718794
11495	24.4	6.0	5.9	chr11	95542977	95547277	(39539345)	C	ERV3-16A3_I-int	LTR/ERVL	(912)	4314	7	718795
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
2374	8.1	0.0	0.0	chr11	96255866	96256173	(38830449)	C	AluSq2	SINE/Alu	(0)	313	1	719877
228	24.1	14.1	3.7	chr11	96256251	96256332	(38830290)	C	MIRb	SINE/MIR	(175)	93	2	719875
255	34.0	16.5	4.0	chr11	96256333	96256713	(38829909)	+	L2c	LINE/L2	2948	3387	(0)	719874
924	26.6	13.0	3.2	chr11	96330521	96330989	(38755633)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	3	719993
1448	22.4	11.1	6.1	chr11	97963447	97964133	(37122489)	C	MER61E	LTR/ERV1	(2)	777	1	721865
1432	23.5	7.1	7.4	chr11	97973243	97973850	(37112772)	C	MER61E	LTR/ERV1	(29)	616	7	721869
1326	23.2	3.0	8.2	chr11	102341892	102342308	(32744314)	C	LTR55	LTR/ERVL?	(8)	540	152	727795
4012	13.4	8.9	3.8	chr11	106176828	106177612	(28909010)	+	LTR1A2	LTR/ERV1	1	829	(8)	733217
1277	14.6	10.5	0.0	chr11	106177670	106177908	(28908714)	+	MER4A1	LTR/ERV1	57	323	(149)	733218
3073	16.3	3.5	8.5	chr11	110075306	110076034	(25010588)	C	LTR8	LTR/ERV1	(0)	691	1	739233
614	30.7	16.2	5.5	chr11	111879628	111880047	(23206575)	C	L2c	LINE/L2	(4)	3383	2910	742120
15	7.0	6.7	0.0	chr11	114083198	114083227	(21003395)	+	(TTGTCT)n	Simple_repeat	1	32	(0)	745722
23	16.4	1.9	3.8	chr11	118176619	118176670	(16909952)	+	GA-rich	Low_complexity	1	53	(0)	752450
61	0.0	0.0	0.0	chr11	118240733	118240784	(16845838)	+	(AC)n	Simple_repeat	1	52	(0)	752547
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
17	21.1	0.0	2.2	chr11	119089488	119089533	(15997089)	+	G-rich	Low_complexity	1	46	(0)	754238
21	16.1	5.2	1.6	chr11	119317188	119317245	(15769377)	+	(CGCCC)n	Simple_repeat	1	61	(0)	754671
6271	9.9	1.8	1.3	chr11	125552167	125553314	(9533308)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	1769	764722
21	21.2	1.8	1.7	chr11	130314431	130314494	(4772128)	+	(GGC)n	Simple_repeat	1	64	(0)	771693
22	2.4	9.1	2.1	chr12	6533857	6533900	(126741409)	+	(CCCAGTG)n	Simple_repeat	1	48	(0)	788907
21	22.5	1.7	1.6	chr12	6612945	6613004	(126662305)	+	(CCCT)n	Simple_repeat	1	61	(0)	789028
240	30.4	4.9	4.1	chr12	6635340	6635510	(126639799)	+	UCON132b	DNA/hAT-Tip100	28	288	(17)	789081
31	3.3	0.0	0.0	chr12	9751893	9751923	(123523386)	+	(AG)n	Simple_repeat	1	31	(0)	794271
2101	17.0	6.3	1.2	chr12	9751924	9752122	(123523187)	C	MSTA	LTR/ERVL-MaLR	(208)	220	2	794270
1763	2.8	0.5	0.0	chr12	25769923	25770134	(107505175)	+	L1PA5	LINE/L1	5940	6152	(2)	816951
4688	10.3	0.2	0.0	chr12	26456046	26456676	(106818633)	+	MER41B	LTR/ERV1	3	634	(0)	817994
2670	15.6	8.3	0.6	chr12	26694080	26694609	(106580700)	+	MER90	LTR/ERV1	1	575	(0)	818334
183	28.2	4.9	8.2	chr12	31618117	31618201	(101657108)	+	MIR	SINE/MIR	169	250	(12)	825637
1905	18.6	6.1	9.8	chr12	31618246	31618390	(101656919)	+	LTR54	LTR/ERV1	1	147	(363)	825642
3758	13.3	2.7	0.0	chr12	31618391	31618969	(101656340)	C	MER41E	LTR/ERV1	(0)	595	1	825643
4527	8.9	6.1	2.7	chr12	31733786	31734288	(101541021)	C	LTR8	LTR/ERV1	(166)	525	1	825921
872	32.1	7.2	4.1	chr12	31734289	31734503	(101540806)	C	LTR33	LTR/ERVL	(260)	255	33	825920
3942	11.7	3.2	2.0	chr12	31832619	31833230	(101442079)	C	LTR77	LTR/ERV1	(2)	620	1	826161
1260	9.2	0.6	0.0	chr12	32005392	32005554	(101269755)	+	AluSx1	SINE/Alu	133	296	(16)	826558
4308	12.8	0.3	0.5	chr12	32021013	32021530	(101253779)	C	MER41B	LTR/ERV1	(117)	517	2	826606
2657	17.6	4.7	11.4	chr12	32021531	32021598	(101253711)	C	MER67C	LTR/ERV1	(328)	383	363	826605
1879	17.2	0.7	1.6	chr12	32021599	32021911	(101253398)	C	AluJr	SINE/Alu	(2)	310	1	826608
5956	13.0	1.8	0.3	chr12	42442666	42443554	(90831755)	+	HERVK22-int	LTR/ERVK	4	905	(5932)	836642
32	9.0	3.5	8.0	chr12	45729578	45729664	(87545645)	+	(TCC)n	Simple_repeat	1	83	(0)	841280
313	25.8	3.8	9.2	chr12	46357773	46357913	(86917396)	+	MER5A	DNA/hAT-Charlie	35	167	(22)	842149
15	7.9	7.4	0.0	chr12	47820442	47820468	(85454841)	+	(AC)n	Simple_repeat	1	29	(0)	844248
14	26.8	1.3	6.4	chr12	47820670	47820746	(85454563)	+	(CCCTCC)n	Simple_repeat	1	78	(0)	844249
37	26.2	2.4	5.2	chr12	48788896	48789065	(84486244)	+	(GCCC)n	Simple_repeat	1	174	(0)	845785
31	25.4	2.9	4.9	chr12	48815413	48815551	(84459758)	+	GA-rich	Low_complexity	1	143	(0)	845854
350	24.9	6.0	14.4	chr12	49093058	49093259	(84182050)	+	MIRc	SINE/MIR	9	192	(16)	846378
834	17.2	16.3	0.0	chr12	49127221	49127389	(84147920)	C	AluJb	SINE/Alu	(45)	267	66	846443
1141	15.4	13.0	2.6	chr12	49273843	49274076	(84001233)	+	AluJb	SINE/Alu	34	295	(17)	846845
254	25.0	3.6	12.9	chr12	49274077	49274127	(84001182)	C	MER5A1	DNA/hAT-Charlie	(54)	112	71	846844
1600	16.3	6.1	0.0	chr12	49274128	49274285	(84001024)	C	AluJo	SINE/Alu	(18)	294	122	846846
15	13.8	0.0	2.9	chr12	50050777	50050810	(83224499)	+	(CCCCTC)n	Simple_repeat	1	34	(0)	848331
35	13.2	0.0	1.6	chr12	50756951	50757012	(82518297)	+	(CCCT)n	Simple_repeat	1	62	(0)	849936
2343	7.1	0.4	0.0	chr12	50757015	50757294	(82518015)	C	AluSp	SINE/Alu	(32)	281	1	849937
41	0.0	0.0	0.0	chr12	51246605	51246639	(82028670)	+	(TG)n	Simple_repeat	1	35	(0)	850926
2178	10.7	2.0	1.0	chr12	51328975	51329273	(81946036)	+	AluSz	SINE/Alu	1	302	(10)	851141
387	32.0	2.0	3.2	chr12	51905704	51905858	(81369451)	C	Tigger19b	DNA/TcMar-Tigger	(7)	543	391	852120
441	29.8	6.5	6.5	chr12	52662382	52662582	(80612727)	C	MIRc	SINE/MIR	(50)	218	18	853233
1505	12.8	10.3	1.7	chr12	53324035	53324327	(79950982)	C	MER1B	DNA/hAT-Charlie	(1)	338	18	854488
18	7.0	0.0	5.9	chr12	53380385	53380418	(79894891)	+	(GCG)n	Simple_repeat	1	34	(0)	854631
17	21.9	10.1	0.0	chr12	53994769	53994847	(79280462)	+	(GCGA)n	Simple_repeat	1	87	(0)	855738
17	22.0	2.3	0.0	chr12	54032808	54032851	(79242458)	+	(TCCC)n	Simple_repeat	1	45	(0)	855768
13	14.8	0.0	3.1	chr12	54161856	54161887	(79113422)	+	G-rich	Low_complexity	1	32	(0)	855963
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
17	24.5	3.0	2.9	chr12	57128414	57128479	(76146830)	+	(TCCC)n	Simple_repeat	1	68	(0)	860760
15	19.9	0.0	0.0	chr12	57128601	57128629	(76146680)	+	(C)n	Simple_repeat	1	29	(0)	860761
17	7.5	6.2	5.9	chr12	64451496	64451543	(68823766)	+	(TAAGTTT)n	Simple_repeat	1	51	(0)	871146
4973	11.7	2.5	2.3	chr12	65642858	65643697	(67631612)	C	L1MA8	LINE/L1	(6)	6285	5444	873104
269	21.8	28.4	2.5	chr12	65643840	65643999	(67631310)	+	MamGypLTR1d	LTR/Gypsy	1	218	(595)	873105
3541	14.9	4.6	2.6	chr12	66168241	66168458	(67106851)	+	L1MB2	LINE/L1	5827	6070	(101)	873911
1933	14.8	6.1	0.8	chr12	66168464	66168837	(67106472)	+	MER57B2	LTR/ERV1	9	403	(0)	873919
893	16.4	1.9	0.6	chr12	68351935	68352093	(64923216)	+	MLT1A0	LTR/ERVL-MaLR	1	161	(204)	877220
670	14.3	1.9	0.9	chr12	68352094	68352199	(64923110)	+	MER41-int	LTR/ERV1	5840	5946	(0)	877221
3886	10.1	2.7	1.1	chr12	68352200	68352738	(64922571)	+	MER41B	LTR/ERV1	1	548	(86)	877221
3977	12.0	1.1	0.0	chr12	70090836	70091394	(63183915)	C	MER61E	LTR/ERV1	(4)	565	1	880366
2020	8.8	7.5	0.0	chr12	71687297	71687568	(61587741)	+	AluSx	SINE/Alu	1	294	(18)	882669
2106	10.9	0.7	1.3	chr12	71839102	71839403	(61435906)	+	AluSx	SINE/Alu	1	300	(12)	882972
290	32.8	10.1	0.7	chr12	71839404	71839458	(61435851)	C	MIRc	SINE/MIR	(200)	68	6	882971
426	31.3	10.7	2.5	chr12	75683824	75684062	(57591247)	C	MIR	SINE/MIR	(0)	262	2	887914
4424	6.7	0.0	0.0	chr12	75684079	75684632	(57590677)	+	MER41A	LTR/ERV1	1	554	(0)	887915
43	18.2	4.6	4.4	chr12	76158339	76158469	(57116840)	+	(TA)n	Simple_repeat	1	137	(0)	888762
383	25.2	16.9	2.0	chr12	76158481	76158630	(57116679)	C	MIRb	SINE/MIR	(61)	207	31	888763
4507	11.7	0.9	0.3	chr12	76303737	76304365	(56970944)	C	MER41B	LTR/ERV1	(0)	634	2	889041
233	30.5	12.8	0.0	chr12	76304367	76304461	(56970848)	+	L2a	LINE/L2	3048	3156	(270)	889033
614	25.6	0.7	2.1	chr12	89042300	89042439	(44232870)	+	MIR	SINE/MIR	19	156	(106)	906374
523	27.1	9.8	0.5	chr12	89042440	89042661	(44232648)	+	L1ME3A	LINE/L1	5301	5545	(628)	906375
2947	27.4	8.1	6.6	chr12	89195116	89195578	(44079731)	+	L2a	LINE/L2	2649	3178	(248)	906622
38	8.3	0.0	0.0	chr12	89195579	89195629	(44079680)	+	(CT)n	Simple_repeat	1	51	(0)	906624
1058	27.1	7.9	7.9	chr12	89195630	89195647	(44079662)	+	L2a	LINE/L2	3179	3193	(233)	906622
34	0.0	3.0	0.0	chr12	89195648	89195680	(44079629)	+	(CA)n	Simple_repeat	1	34	(0)	906625
1058	27.1	7.9	7.9	chr12	89195681	89195888	(44079421)	+	L2a	LINE/L2	3194	3380	(46)	906622
698	31.4	13.1	3.8	chr12	89235194	89235801	(44039508)	C	L2c	LINE/L2	(1035)	2384	1712	906676
243	27.4	1.4	0.0	chr12	89244551	89244623	(44030686)	+	L3b	LINE/CR1	4748	4821	(411)	906687
328	29.5	2.9	3.5	chr12	89244637	89244808	(44030501)	+	Plat_L3	LINE/CR1	3225	3395	(191)	906688
205	33.1	5.8	3.0	chr12	89244817	89244950	(44030359)	+	L3b	LINE/CR1	5046	5183	(49)	906687
30	18.5	2.7	1.3	chr12	93571496	93571570	(39703739)	+	(CTCC)n	Simple_repeat	1	77	(0)	913738
4510	12.2	0.2	0.2	chr12	96083136	96083769	(37191540)	+	MER41B	LTR/ERV1	1	634	(0)	918401
438	34.0	13.1	8.1	chr12	98439441	98440109	(34835200)	C	LTR78B	LTR/ERV1	(601)	695	2	922210
271	29.4	3.5	8.1	chr12	102438395	102438605	(30836704)	C	MER103C	DNA/hAT-Charlie	(62)	235	35	929030
13	23.2	0.0	0.0	chr12	106956029	106956064	(26319245)	+	(CCCGGC)n	Simple_repeat	1	36	(0)	937152
11	22.1	3.9	3.8	chr12	106956101	106956151	(26319158)	+	(CCCTGCC)n	Simple_repeat	1	53	(0)	937153
1027	9.7	0.0	4.6	chr12	108117181	108117353	(25157956)	C	L1MA9	LINE/L1	(0)	6312	6148	939499
2470	17.1	2.4	1.0	chr12	108117354	108117836	(25157473)	C	LTR45B	LTR/ERV1	(0)	603	3	939500
2220	10.6	1.0	0.0	chr12	110079063	110079355	(23195954)	+	AluSx	SINE/Alu	1	296	(16)	943960
290	19.6	19.3	1.1	chr12	110079899	110079991	(23195318)	C	MLT1O	LTR/ERVL-MaLR	(345)	197	84	943961
28	20.3	5.3	0.0	chr12	110080013	110080088	(23195221)	+	GA-rich	Low_complexity	1	80	(0)	943962
334	21.7	10.4	19.5	chr12	110080122	110080265	(23195044)	+	LTR16C	LTR/ERVL	223	343	(146)	943963
4232	6.0	4.3	0.0	chr12	110271335	110271864	(23003445)	C	MER41A	LTR/ERV1	(0)	554	1	944394
255	29.8	0.0	0.0	chr12	110271866	110271922	(23003387)	C	L2a	LINE/L2	(95)	3331	3275	944395
475	28.4	4.1	2.1	chr12	111404740	111404883	(21870426)	C	MIRb	SINE/MIR	(22)	246	100	947028
4265	8.9	0.4	0.0	chr12	113583776	113584327	(19690982)	C	MER41A	LTR/ERV1	(0)	554	1	951949
274	33.2	16.0	7.4	chr12	113584328	113584669	(19690640)	+	L2a	LINE/L2	3035	3424	(2)	951948
13	21.7	0.0	2.6	chr12	113794999	113795037	(19480272)	+	G-rich	Low_complexity	1	39	(0)	952517
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
1928	22.8	7.7	3.0	chr12	115205039	115205069	(18070240)	+	MLT1H	LTR/ERVL-MaLR	18	48	(501)	955521
4848	11.4	0.9	1.0	chr12	115205070	115205761	(18069548)	+	LTR8	LTR/ERV1	1	691	(0)	955522
4212	6.0	4.2	0.0	chr12	116556050	116556580	(16718729)	C	MER41A	LTR/ERV1	(0)	554	1	958367
408	31.6	1.7	0.0	chr12	116556718	116556834	(16718475)	C	MIRb	SINE/MIR	(125)	143	25	958368
409	21.2	6.8	22.2	chr12	116558537	116558730	(16716579)	C	MIRb	SINE/MIR	(73)	195	34	958372
340	34.4	4.0	6.0	chr12	116558867	116559197	(16716112)	C	Helitron2Na_Mam	RC?/Helitron?	(0)	324	1	958373
21	33.3	4.4	0.8	chr12	118330669	118330703	(14944606)	+	GA-rich	Low_complexity	1	68	(51)	962371
339	30.2	2.4	4.7	chr12	119665476	119665645	(13609664)	C	Helitron3Na_Mam	RC/Helitron	(88)	398	233	965288
1667	14.2	6.1	3.1	chr12	120196390	120196677	(13078632)	+	AluJr	SINE/Alu	1	297	(15)	966423
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
874	20.2	4.6	10.7	chr12	120439734	120439966	(12835343)	C	MER20	DNA/hAT-Charlie	(1)	218	1	967089
30	0.0	0.0	0.0	chr12	120830581	120830606	(12444703)	+	(GA)n	Simple_repeat	1	26	(0)	967932
182	26.7	0.0	0.0	chr12	120830674	120830718	(12444591)	+	MIR	SINE/MIR	134	178	(84)	967933
2374	18.2	3.8	4.4	chr12	120830843	120831365	(12443944)	+	MLT2B1	LTR/ERVL	1	520	(0)	967934
375	23.0	28.2	2.8	chr12	121664113	121664293	(11611016)	+	MLT1K	LTR/ERVL-MaLR	368	594	(1)	969981
223	21.1	30.0	0.0	chr12	121664348	121664465	(11610844)	C	L2b	LINE/L2	(199)	3188	3024	969982
1586	8.8	2.9	0.0	chr12	121664478	121664682	(11610627)	+	AluSx1	SINE/Alu	2	212	(100)	969983
1136	26.4	7.7	1.0	chr12	122064182	122064568	(11210741)	+	MLT1K	LTR/ERVL-MaLR	145	559	(36)	971015
2100	14.5	0.0	0.0	chr12	122366559	122366848	(10908461)	+	AluSz6	SINE/Alu	1	290	(22)	971633
16	6.8	6.5	0.0	chr12	122835081	122835111	(10440198)	+	(TCCCCC)n	Simple_repeat	1	33	(0)	972808
21	20.4	0.0	0.0	chr12	123436354	123436401	(9838908)	+	(CCT)n	Simple_repeat	1	48	(0)	974082
193	24.5	11.7	0.0	chr12	124910736	124910788	(8364521)	C	L3	LINE/CR1	(198)	3901	3842	977135
1215	16.6	4.7	0.5	chr12	124911273	124911477	(8363832)	C	AluSx1	SINE/Alu	(21)	291	78	977136
4014	10.0	0.5	0.0	chr12	126903073	126903623	(6371686)	C	MER41A	LTR/ERV1	(0)	554	1	980589
3989	13.4	2.0	0.2	chr12	126907913	126908534	(6366775)	C	MER41B	LTR/ERV1	(0)	634	1	980595
2588	15.4	0.0	5.9	chr12	127157044	127157520	(6117789)	+	HERVH-int	LTR/ERV1	7173	7621	(92)	981003
3510	7.7	1.3	0.6	chr12	127157602	127158069	(6117240)	+	LTR7C	LTR/ERV1	1	471	(0)	981004
4197	13.9	2.4	1.9	chr12	131362184	131362814	(1912495)	C	MER41B	LTR/ERV1	(0)	634	1	988030
2023	29.7	4.3	5.0	chr12	131362815	131362842	(1912467)	+	L1MC5a	LINE/L1	2448	2472	(305)	988027
2089	15.9	3.3	0.3	chr12	131362843	131363196	(1912113)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	988031
2882	14.4	13.7	1.3	chr12	131605084	131605637	(1669672)	C	MER41B	LTR/ERV1	(0)	634	1	988331
1718	16.7	0.9	0.6	chr13	27138393	27138711	(87225617)	C	LTR47A2	LTR/ERVL	(112)	320	1	1004378
234	26.8	2.3	4.4	chr13	27138748	27138837	(87225491)	C	X7A_LINE	LINE/CR1	(164)	103	16	1004380
18	28.0	0.0	1.6	chr13	28138293	28138354	(86225974)	+	(CCTGCC)n	Simple_repeat	1	62	(0)	1006216
20	11.5	8.2	3.0	chr13	28138450	28138510	(86225818)	+	(CTCCTCC)n	Simple_repeat	1	66	(0)	1006217
15	30.5	0.0	0.0	chr13	28138601	28138652	(86225676)	+	(GGC)n	Simple_repeat	1	52	(0)	1006218
15	19.9	2.5	0.0	chr13	28138675	28138714	(86225614)	+	(CCTCCC)n	Simple_repeat	1	41	(0)	1006219
21	23.2	1.6	1.6	chr13	28138720	28138781	(86225547)	+	(GGC)n	Simple_repeat	1	63	(0)	1006220
4322	7.7	0.9	0.2	chr13	35743835	35744384	(78619944)	C	MER41A	LTR/ERV1	(0)	554	1	1017595
1305	19.9	2.6	3.0	chr13	35744385	35744478	(78619850)	+	MER4D	LTR/ERV1	200	293	(630)	1017594
3862	14.8	4.1	0.2	chr13	35745447	35746055	(78618273)	C	MER41B	LTR/ERV1	(0)	634	1	1017597
1997	18.9	1.8	3.2	chr13	35746056	35746215	(78618113)	C	L1MB7	LINE/L1	(302)	5882	5728	1017596
25	19.0	0.0	1.8	chr13	49792507	49792562	(64571766)	+	(GGC)n	Simple_repeat	1	56	(0)	1039048
22	14.9	2.2	0.0	chr13	49792569	49792613	(64571715)	+	G-rich	Low_complexity	1	46	(0)	1039049
13	27.4	0.0	6.2	chr13	49792664	49792727	(64571601)	+	G-rich	Low_complexity	1	64	(0)	1039049
75	15.5	4.7	4.1	chr13	49996819	49997027	(64367301)	+	G-rich	Low_complexity	1	210	(0)	1039473
1180	21.9	13.9	4.8	chr13	60583606	60584041	(53780287)	+	MER74A	LTR/ERVL	1	482	(76)	1053720
4299	9.3	1.1	1.9	chr13	60584070	60584715	(53779613)	+	LTR8	LTR/ERV1	23	663	(28)	1053721
2078	22.8	5.6	7.6	chr13	64274384	64275072	(50089256)	+	MER61E	LTR/ERV1	1	776	(3)	1058319
13	10.8	3.1	3.0	chr13	74575874	74575905	(39788423)	+	(CCGGC)n	Simple_repeat	1	33	(0)	1072129
14890	13.5	2.9	2.9	chr13	80679234	80680494	(33683834)	C	L1MA1	LINE/L1	(5136)	2429	1127	1080604
2097	24.3	3.3	0.4	chr13	86882804	86883307	(27481021)	+	LTR53	LTR/ERVL	1	519	(0)	1088264
337	37.1	8.0	5.8	chr13	90365785	90366076	(23998252)	+	Tigger19b	DNA/TcMar-Tigger	251	549	(1)	1092832
667	17.3	0.0	7.0	chr13	90376810	90376952	(23987376)	+	L1MA6	LINE/L1	6109	6241	(59)	1092851
25	22.4	1.3	3.8	chr13	99981084	99981162	(14383166)	+	(CCTCCC)n	Simple_repeat	1	80	(0)	1107133
11	17.0	2.9	2.8	chr13	99981243	99981277	(14383051)	+	(CGAGGC)n	Simple_repeat	1	36	(0)	1107134
4246	11.9	3.3	0.1	chr13	108682320	108682999	(5681329)	C	LTR62	LTR/ERVL	(5)	704	3	1119121
262	37.7	4.5	3.2	chr13	108683013	108683297	(5681031)	+	L2c	LINE/L2	3052	3340	(47)	1119117
11208	10.4	4.8	1.5	chr13	110962667	110963654	(3400674)	+	MER41-int	LTR/ERV1	4951	5944	(2)	1121988
3830	12.7	0.2	1.4	chr13	110963655	110964213	(3400115)	+	MER41A	LTR/ERV1	1	552	(2)	1121988
20	5.5	7.9	0.0	chr13	114281896	114281934	(82394)	+	(GAGGG)n	Simple_repeat	1	42	(0)	1125454
4278	8.3	0.0	0.7	chr14	31242186	31242743	(75800975)	C	MER41A	LTR/ERV1	(0)	554	1	1143240
4121	13.4	4.6	3.2	chr14	31242744	31242857	(75800861)	C	MER72	LTR/ERV1	(605)	117	1	1143239
1994	11.1	2.4	1.4	chr14	31242878	31243165	(75800553)	C	AluSx	SINE/Alu	(21)	291	1	1143241
498	34.6	18.8	2.1	chr14	34464981	34466329	(72577389)	C	L2c	LINE/L2	(925)	2494	869	1147849
628	23.4	2.4	5.8	chr14	37167293	37167365	(69876353)	C	MER5A1	DNA/hAT-Charlie	(0)	166	93	1152586
4559	11.1	3.9	5.1	chr14	37167366	37168065	(69875653)	+	LTR8	LTR/ERV1	1	691	(0)	1152587
4404	11.3	1.9	0.2	chr14	64363425	64364047	(42679671)	+	MER41B	LTR/ERV1	1	634	(0)	1191135
4303	9.9	1.1	3.1	chr14	69696799	69697441	(37346277)	C	MER41B	LTR/ERV1	(0)	634	5	1200034
1316	15.4	6.6	6.3	chr14	69697442	69697665	(37346053)	+	MER33	DNA/hAT-Charlie	88	320	(4)	1200033
403	29.9	1.0	2.0	chr14	70853599	70853734	(36189984)	+	MIRb	SINE/MIR	15	151	(117)	1201872
4081	8.2	0.7	1.3	chr14	70853774	70854255	(36189463)	+	MER41A	LTR/ERV1	1	480	(74)	1201873
2560	20.2	6.5	2.5	chr14	70886637	70887231	(36156487)	C	MLT1E3	LTR/ERVL-MaLR	(4)	620	1	1201927
303	14.6	0.0	0.0	chr14	72907419	72907465	(34136253)	C	FLAM_C	SINE/Alu	(185)	117	71	1205057
3767	6.1	2.1	0.0	chr14	72907466	72907924	(34135794)	+	MER41A	LTR/ERV1	1	469	(85)	1205058
41	30.0	2.4	2.3	chr14	75981843	75982011	(31061707)	+	(TC)n	Simple_repeat	1	173	(0)	1211417
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
318	25.3	13.2	0.6	chr14	91267849	91268007	(15775711)	C	L2c	LINE/L2	(936)	2483	2302	1235428
2102	10.0	0.7	0.0	chr14	91268100	91268400	(15775318)	+	LTR62	LTR/ERVL	2	304	(405)	1235437
4129	11.4	0.6	1.1	chr14	92575308	92575934	(14467784)	C	MER41B	LTR/ERV1	(1)	633	10	1237813
38	15.9	6.0	4.0	chr14	94129319	94129435	(12914283)	+	GA-rich	Low_complexity	1	124	(0)	1240674
2595	8.9	0.0	3.0	chr14	102533654	102534023	(4509695)	C	MER41A	LTR/ERV1	(169)	385	21	1255114
685	17.0	4.3	0.0	chr14	102534024	102534135	(4509583)	+	AluJo	SINE/Alu	13	129	(183)	1255116
2411	6.5	2.0	0.0	chr14	102534144	102534437	(4509281)	+	AluY	SINE/Alu	2	301	(10)	1255117
934	13.7	0.8	0.0	chr14	102550746	102550876	(4492842)	+	FLAM_C	SINE/Alu	1	132	(11)	1255152
3946	8.6	3.2	1.1	chr14	102551038	102551410	(4492308)	+	MER41A	LTR/ERV1	1	379	(175)	1255153
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
3884	11.4	7.3	3.1	chr15	29672818	29673424	(72317765)	C	MER41B	LTR/ERV1	(0)	634	1	1275851
3665	14.8	4.4	7.5	chr15	29673425	29673894	(72317295)	C	LTR8	LTR/ERV1	(232)	459	6	1275850
4217	11.9	0.2	4.1	chr15	34656194	34656851	(67334338)	+	MER41B	LTR/ERV1	1	632	(2)	1283172
12	18.4	5.4	0.0	chr15	38251927	38251963	(63739226)	+	(GGAGCAC)n	Simple_repeat	1	39	(0)	1288013
12	20.8	0.0	2.9	chr15	38252257	38252291	(63738898)	+	(GGC)n	Simple_repeat	1	35	(0)	1288014
59	1.9	0.0	0.0	chr15	40520198	40520252	(61470937)	+	(TG)n	Simple_repeat	1	55	(0)	1291340
16	0.0	0.0	0.0	chr15	43825158	43825175	(58166014)	+	(A)n	Simple_repeat	1	18	(0)	1297703
203	36.5	7.5	0.0	chr15	43825203	43825276	(58165913)	+	MamTip2	DNA/hAT-Tip100	115	194	(111)	1297704
1736	13.7	7.8	0.0	chr15	43825317	43825587	(58165602)	C	AluSx1	SINE/Alu	(17)	295	2	1297705
1318	15.4	1.7	0.9	chr15	44727256	44727484	(57263705)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	6	1299467
4768	8.9	0.6	0.0	chr15	45583636	45584264	(56406925)	C	MER41B	LTR/ERV1	(1)	633	1	1300981
1597	12.1	4.3	2.6	chr15	45584265	45584411	(56406778)	C	MER4D1	LTR/ERV1	(123)	777	624	1300980
697	19.6	0.0	2.1	chr15	45584389	45584546	(56406643)	+	FLAM_C	SINE/Alu	6	218	(84)	1300977
1601	19.6	4.4	0.6	chr15	51646967	51647294	(50343895)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	1309812
1481	23.8	8.3	4.7	chr15	51647295	51647579	(50343610)	C	L2a	LINE/L2	(318)	3108	2816	1309811
4037	11.6	1.9	0.2	chr15	51652211	51652795	(50338394)	+	MER41E	LTR/ERV1	1	595	(0)	1309825
12	16.3	2.8	2.7	chr15	52019123	52019158	(49972031)	+	G-rich	Low_complexity	1	37	(0)	1310540
35	9.7	5.8	1.4	chr15	56243300	56243421	(45747768)	+	GA-rich	Low_complexity	1	127	(0)	1316884
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
1071	16.7	0.0	0.0	chr15	56735480	56735641	(45255548)	+	AluJo	SINE/Alu	136	297	(15)	1317509
887	13.8	9.7	4.9	chr15	56735646	56735850	(45255339)	C	LTR54	LTR/ERV1	(277)	233	18	1317508
2333	9.8	1.2	0.0	chr15	56735851	56736185	(45255004)	+	L1PB1	LINE/L1	5811	6149	(2)	1317510
413	31.0	12.4	4.8	chr15	56783011	56783278	(45207911)	C	L2c	LINE/L2	(3)	3384	3094	1317605
4264	13.7	0.2	0.2	chr15	56783337	56783970	(45207219)	+	MER41B	LTR/ERV1	1	634	(0)	1317606
3838	12.3	6.5	0.3	chr15	56784224	56784817	(45206372)	+	MER41B	LTR/ERV1	1	633	(1)	1317607
33	24.8	3.5	2.5	chr15	57323971	57324084	(44667105)	+	GA-rich	Low_complexity	1	118	(0)	1318503
4455	8.2	3.5	0.5	chr15	58344275	58344865	(43646324)	C	LTR71B	LTR/ERV1	(0)	610	2	1320015
3474	13.1	4.0	1.1	chr15	58352020	58352550	(43638639)	C	MER41B	LTR/ERV1	(87)	547	1	1320027
1668	8.0	1.4	0.0	chr15	58352551	58352763	(43638426)	C	MER41-int	LTR/ERV1	(2)	5944	5729	1320027
4547	11.2	0.1	2.2	chr15	60021358	60022004	(41969185)	C	MER41B	LTR/ERV1	(0)	634	1	1323122
1705	20.8	9.6	5.4	chr15	60022019	60022661	(41968528)	C	MER21C	LTR/ERVL	(137)	794	15	1323123
4460	8.8	0.0	0.4	chr15	63226696	63227251	(38763938)	C	MER41A	LTR/ERV1	(0)	554	1	1328196
4235	16.2	2.6	2.7	chr15	63792673	63793125	(38198064)	C	MER21B	LTR/ERVL	(52)	816	362	1329140
4655	9.8	0.2	0.2	chr15	63793126	63793756	(38197433)	+	MER41B	LTR/ERV1	1	631	(3)	1329141
347	24.2	2.9	0.0	chr15	65185929	65186027	(36805162)	+	LTR33	LTR/ERVL	312	413	(102)	1332079
1042	10.2	0.0	0.0	chr15	65186034	65186170	(36805019)	C	FLAM_C	SINE/Alu	(6)	137	1	1332080
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
4640	12.0	0.0	0.3	chr15	66624022	66624655	(35366534)	+	MER41B	LTR/ERV1	3	634	(0)	1335108
12	11.2	3.2	3.1	chr15	67543183	67543213	(34447976)	+	(CCCCTC)n	Simple_repeat	1	32	(0)	1336781
3864	12.5	2.8	5.5	chr15	67900450	67900894	(34090295)	C	MER41B	LTR/ERV1	(204)	430	1	1337340
1304	23.1	7.4	5.0	chr15	67900895	67901183	(34090006)	C	L1MEg	LINE/L1	(939)	5207	4906	1337335
663	20.2	12.4	1.0	chr15	67920464	67920663	(34070526)	C	HAL1	LINE/L1	(887)	1620	1395	1337380
1746	8.8	0.4	0.0	chr15	67920664	67920890	(34070299)	+	MER41B	LTR/ERV1	1	228	(406)	1337383
13	19.4	0.0	2.7	chr15	68818818	68818854	(33172335)	+	(CCCCCA)n	Simple_repeat	1	37	(0)	1339118
11	31.8	1.9	0.0	chr15	68818933	68818986	(33172203)	+	(CCCGCC)n	Simple_repeat	1	55	(0)	1339119
3327	13.9	4.1	11.8	chr15	68991613	68992346	(32998843)	C	LTR76	LTR/ERV1	(0)	675	1	1339417
11	11.2	6.9	0.0	chr15	70099568	70099596	(31891593)	+	(TCCCCC)n	Simple_repeat	1	31	(0)	1341465
282	34.2	15.6	1.2	chr15	74389383	74389628	(27601561)	C	L2a	LINE/L2	(85)	3341	3054	1348752
430	28.4	4.9	2.5	chr15	74760254	74760412	(27230777)	C	MLT1M	LTR/ERVL-MaLR	(402)	270	108	1349462
3945	13.8	9.0	4.3	chr15	75065784	75066524	(26924665)	C	LTR19C	LTR/ERV1	(0)	779	1	1350108
23	20.4	3.1	1.5	chr15	75451584	75451647	(26539542)	+	G-rich	Low_complexity	1	66	(0)	1350822
214	35.0	4.1	1.7	chr15	75640758	75640876	(26350313)	+	MER5A	DNA/hAT-Charlie	62	183	(6)	1351282
648	27.4	6.2	6.8	chr15	83092326	83092617	(18898572)	+	MER39	LTR/ERV1	1	509	(198)	1364035
247	8.9	13.5	0.0	chr15	83092636	83092680	(18898509)	C	U2	snRNA	(135)	53	2	1364036
467	18.1	1.9	2.8	chr15	83092758	83092866	(18898323)	+	L1ME3Cz	LINE/L1	390	474	(523)	1364037
494	33.1	6.4	7.5	chr15	88537760	88538108	(13453081)	+	L2b	LINE/L2	3030	3374	(1)	1372565
3776	6.3	9.0	0.0	chr15	88538134	88538641	(13452548)	+	LTR6B	LTR/ERV1	1	558	(0)	1372566
5639	21.9	1.2	1.6	chr15	89079559	89080685	(12910504)	+	L1M4b	LINE/L1	11	1132	(5735)	1373611
193	24.8	11.4	6.4	chr15	89782104	89782228	(12208961)	+	MIR3	SINE/MIR	7	138	(70)	1374871
4195	11.7	4.3	1.0	chr15	89782290	89782735	(12208454)	+	MER41B	LTR/ERV1	2	449	(185)	1374872
3280	13.7	2.6	0.6	chr15	90648416	90648950	(11342239)	+	MER41B	LTR/ERV1	2	547	(87)	1376776
199	37.2	10.3	3.7	chr15	90895876	90896072	(11095117)	C	L2	LINE/L2	(788)	2631	2408	1377316
1814	14.9	1.3	6.7	chr15	90896073	90896400	(11094789)	+	AluJb	SINE/Alu	2	311	(1)	1377317
456	31.5	5.6	4.5	chr15	90901701	90901818	(11089371)	+	L1ME4c	LINE/L1	282	409	(421)	1377331
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
13	16.1	2.5	4.9	chr15	94585056	94585095	(7406094)	+	(TCCTTCT)n	Simple_repeat	1	41	(0)	1383220
328	22.2	4.9	3.9	chr15	101168480	101168599	(822590)	C	MIRb	SINE/MIR	(77)	191	71	1392439
6184	14.3	3.4	0.6	chr16	387824	388797	(89949548)	C	LTR5B	LTR/ERVK	(0)	1002	1	1394663
4241	8.2	0.7	2.0	chr16	1293859	1294279	(89044066)	C	MER41A	LTR/ERV1	(130)	424	1	1395699
684	17.3	0.8	6.8	chr16	1294280	1294311	(89044034)	+	AluJr	SINE/Alu	202	229	(83)	1395698
235	17.4	9.2	1.4	chr16	2215546	2215615	(88122730)	C	L1ME3	LINE/L1	(3)	6159	6084	1397045
2607	4.8	0.0	0.0	chr16	2215618	2215928	(88122417)	C	AluY	SINE/Alu	(0)	311	1	1397046
14	31.3	3.8	1.2	chr16	2963285	2963364	(87374981)	+	(GCCCCC)n	Simple_repeat	1	83	(0)	1398268
12	8.0	0.0	9.4	chr16	2963558	2963589	(87374756)	+	G-rich	Low_complexity	1	32	(0)	1398269
2396	8.1	0.0	0.3	chr16	8112559	8112855	(82225490)	+	AluY	SINE/Alu	1	296	(15)	1408346
4001	13.8	0.3	9.2	chr16	8112856	8113553	(82224792)	+	LTR8	LTR/ERV1	45	691	(0)	1408345
1027	27.0	9.7	6.4	chr16	9078898	9079336	(81259009)	C	MLT1J	LTR/ERVL-MaLR	(50)	462	8	1410539
1624	21.8	6.2	10.1	chr16	10362125	10362571	(79975774)	C	LTR77	LTR/ERV1	(178)	444	2	1413332
638	27.7	8.0	1.2	chr16	10972054	10972298	(79366047)	+	MER102b	DNA/hAT-Charlie	1	263	(78)	1414677
14	15.3	2.6	2.6	chr16	10972372	10972409	(79365936)	+	(TCTCCTG)n	Simple_repeat	1	39	(0)	1414678
34	33.1	4.4	3.8	chr16	11232413	11232638	(79105707)	+	GA-rich	Low_complexity	1	236	(0)	1415181
50	4.8	6.5	3.0	chr16	11232549	11232641	(79105704)	+	(AAGA)n	Simple_repeat	1	99	(0)	1415182
899	16.3	0.0	0.0	chr16	11232711	11232845	(79105500)	+	FLAM_C	SINE/Alu	1	135	(8)	1415183
1716	25.4	10.5	2.5	chr16	12539108	12540236	(77798109)	C	L1MD3	LINE/L1	(174)	6557	5326	1418138
3364	11.6	4.9	1.1	chr16	12611148	12611680	(77726665)	+	MER41A	LTR/ERV1	1	554	(0)	1418242
17	4.9	0.0	0.0	chr16	14000100	14000120	(76338225)	+	(GA)n	Simple_repeat	1	21	(0)	1421280
340	31.4	3.0	7.6	chr16	14000416	14000587	(76337758)	C	MIRc	SINE/MIR	(65)	203	40	1421281
21	0.0	0.0	0.0	chr16	15522432	15522454	(74815891)	+	(CA)n	Simple_repeat	1	23	(0)	1424605
4662	9.3	1.9	0.3	chr16	15570564	15571187	(74767158)	C	MER41B	LTR/ERV1	(0)	634	1	1424735
467	18.9	0.0	16.9	chr16	15571188	15571236	(74767109)	C	MER20	DNA/hAT-Charlie	(143)	76	36	1424734
1205	23.6	2.4	13.2	chr16	15571270	15571359	(74766986)	+	MER4C	LTR/ERV1	1	83	(382)	1424736
2331	7.1	1.7	1.0	chr16	15571360	15571654	(74766691)	C	AluYh3	SINE/Alu	(14)	297	1	1424737
1420	11.6	3.6	0.0	chr16	15574371	15574586	(74763759)	C	LTR8	LTR/ERV1	(467)	224	1	1424743
3734	13.7	0.5	2.4	chr16	15574592	15574795	(74763550)	C	LTR39	LTR/ERV1	(166)	617	423	1424742
568	20.6	5.5	12.4	chr16	15576553	15576746	(74761599)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	285	1424751
3137	18.8	2.6	1.9	chr16	15576752	15577391	(74760954)	C	LTR9D	LTR/ERV1	(0)	645	1	1424752
3814	14.2	1.9	2.9	chr16	17081986	17082628	(73255717)	C	MER41B	LTR/ERV1	(38)	596	3	1428280
1666	14.1	0.0	9.6	chr16	17082629	17082940	(73255405)	C	MER41B	LTR/ERV1	(241)	393	112	1428281
4275	14.7	0.0	0.2	chr16	17591112	17591746	(72746599)	+	MER41B	LTR/ERV1	1	634	(0)	1429437
3728	8.1	11.1	1.7	chr16	20747061	20747599	(69590746)	+	LTR4	LTR/ERV1	1	596	(0)	1436402
25	15.6	9.0	2.1	chr16	20785536	20785624	(69552721)	+	A-rich	Low_complexity	1	97	(0)	1436479
21	5.5	2.4	4.7	chr16	20785753	20785794	(69552551)	+	(AAAAATC)n	Simple_repeat	1	43	(0)	1436480
370	26.2	8.0	1.9	chr16	20944924	20944973	(69393372)	+	MIRb	SINE/MIR	35	84	(184)	1436772
4413	10.9	1.7	0.9	chr16	20944974	20945480	(69392865)	+	MER41B	LTR/ERV1	1	504	(130)	1436773
2690	13.0	16.3	3.9	chr16	23596928	23597462	(66740883)	C	LTR18B	LTR/ERVL	(0)	614	1	1442650
330	21.3	13.9	11.0	chr16	23597463	23597585	(66740760)	+	HAL1b	LINE/L1	1844	1991	(430)	1442649
2078	26.2	6.9	0.8	chr16	23862046	23862686	(66475659)	C	L1MEb	LINE/L1	(5386)	684	2	1443316
239	17.4	0.0	0.0	chr16	23862697	23862742	(66475603)	C	MIR3	SINE/MIR	(71)	137	92	1443317
2376	9.1	0.0	0.0	chr16	23862744	23863051	(66475294)	+	MER41C	LTR/ERV1	1	308	(213)	1443318
20	10.8	5.0	0.0	chr16	24539917	24539956	(65798389)	+	(GGC)n	Simple_repeat	1	42	(0)	1444971
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
190	27.1	11.4	0.0	chr16	28212334	28212403	(62125942)	C	L2b	LINE/L2	(0)	3375	3297	1452867
1194	19.1	16.9	0.4	chr16	28212503	28212753	(62125592)	C	AluJo	SINE/Alu	(10)	302	2	1452868
2262	10.9	0.0	0.7	chr16	28862927	28863230	(61475115)	C	AluSx	SINE/Alu	(10)	302	1	1454613
13	16.5	0.0	0.0	chr16	28863250	28863276	(61475069)	+	(CCA)n	Simple_repeat	1	27	(0)	1454614
13	29.6	0.0	0.0	chr16	28863277	28863294	(61475051)	+	(CCCACC)n	Simple_repeat	2	46	(0)	1454615
6766	12.4	5.0	6.6	chr16	29782762	29784049	(60554296)	+	MER11A	LTR/ERVK	1	1266	(0)	1456558
15	27.4	2.9	2.8	chr16	29807510	29807578	(60530767)	+	(GCG)n	Simple_repeat	1	71	(0)	1456611
289	26.6	1.2	0.0	chr16	30092840	30092918	(60245427)	C	MIRc	SINE/MIR	(77)	191	112	1457246
38	20.4	1.2	0.0	chr16	30378822	30378906	(59959439)	+	G-rich	Low_complexity	1	86	(0)	1457880
1075	11.5	0.0	3.6	chr16	30747851	30748015	(59590330)	+	AluJr	SINE/Alu	137	295	(17)	1458788
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
48	17.2	3.7	6.5	chr16	30923456	30923618	(59414727)	+	GA-rich	Low_complexity	1	169	(0)	1459205
14	23.0	0.0	0.0	chr16	30923682	30923733	(59414612)	+	(CCCCTTT)n	Simple_repeat	1	52	(0)	1459206
17	21.5	0.0	3.9	chr16	30923794	30923845	(59414500)	+	G-rich	Low_complexity	1	52	(0)	1459207
3949	15.2	2.5	1.9	chr16	46943138	46943588	(43394757)	C	MER41B	LTR/ERV1	(185)	449	2	1466370
1906	15.8	0.0	4.6	chr16	46943589	46943757	(43394588)	+	AluJr	SINE/Alu	153	309	(3)	1466369
4607	10.1	1.7	0.3	chr16	50458067	50458689	(39879656)	+	MER41B	LTR/ERV1	3	634	(0)	1472528
17	20.6	0.0	0.0	chr16	53055666	53055704	(37282641)	+	(CCT)n	Simple_repeat	1	39	(0)	1477120
4407	5.9	2.5	0.6	chr16	57109505	57109926	(33228419)	C	MER41A	LTR/ERV1	(122)	432	2	1484372
498	24.6	0.0	2.6	chr16	57109938	57110054	(33228291)	C	L4_A_Mam	LINE/RTE-X	(211)	4779	4666	1484374
12	12.0	3.7	0.0	chr16	57536735	57536761	(32801584)	+	G-rich	Low_complexity	1	28	(0)	1485265
1968	23.5	3.2	4.9	chr16	58265128	58265758	(32072587)	+	MLT1E3	LTR/ERVL-MaLR	5	624	(0)	1486765
2866	11.8	2.1	1.9	chr16	58433394	58433808	(31904537)	C	LTR47B2	LTR/ERVL	(12)	422	1	1487087
1157	9.4	0.0	0.7	chr16	58434848	58434996	(31903349)	C	AluSp	SINE/Alu	(161)	152	5	1487091
63	0.0	0.0	0.0	chr16	62126447	62126500	(28211845)	+	(GA)n	Simple_repeat	1	54	(0)	1492921
3093	28.1	7.5	7.8	chr16	62126501	62127142	(28211203)	C	L1MC4	LINE/L1	(5432)	783	70	1492914
3900	11.0	2.3	1.4	chr16	65768863	65769426	(24568919)	C	MER61E	LTR/ERV1	(0)	569	1	1498482
1938	17.1	3.2	3.0	chr16	67481516	67482239	(22856106)	+	MER51C	LTR/ERV1	1	640	(0)	1501694
3012	8.8	1.2	4.4	chr16	67890603	67890872	(22447473)	C	LTR15	LTR/ERV1	(221)	272	1	1502535
712	14.7	0.8	0.8	chr16	67890873	67890989	(22447356)	+	AluJb	SINE/Alu	184	300	(12)	1502532
731	13.0	0.0	0.0	chr16	67890990	67891089	(22447256)	+	AluSx	SINE/Alu	1	100	(212)	1502537
216	15.4	5.8	4.4	chr16	68080248	68080315	(22258030)	+	MIR1_Amn	SINE/MIR	85	153	(77)	1502894
16	14.7	5.3	0.0	chr16	70439132	70439169	(19899176)	+	(CGC)n	Simple_repeat	1	40	(0)	1507981
17	28.0	1.7	0.0	chr16	70439170	70439180	(19899165)	+	(CCCGCC)n	Simple_repeat	28	61	(0)	1507980
25	19.9	1.5	2.9	chr16	71289614	71289681	(19048664)	+	G-rich	Low_complexity	1	69	(0)	1509393
14	8.9	11.1	0.0	chr16	71884098	71884133	(18454212)	+	(CAGA)n	Simple_repeat	1	40	(0)	1510564
15	24.6	0.0	0.0	chr16	71884210	71884252	(18454093)	+	(CCTCCC)n	Simple_repeat	1	43	(0)	1510565
12	12.6	0.0	3.6	chr16	74999480	74999507	(15338838)	+	(CCCG)n	Simple_repeat	1	28	(0)	1515909
16	15.3	2.0	6.0	chr16	77212374	77212422	(13125923)	+	G-rich	Low_complexity	1	50	(0)	1519452
3892	11.8	7.6	0.2	chr16	77739133	77739719	(12598626)	C	MER41B	LTR/ERV1	(0)	634	1	1520389
652	22.0	15.9	4.5	chr16	77739731	77740063	(12598282)	+	LTR16A2	LTR/ERVL	114	484	(11)	1520390
454	30.9	1.0	3.8	chr16	79867776	79867984	(10470361)	+	MIRb	SINE/MIR	43	245	(23)	1524306
407	36.8	5.0	0.0	chr16	81481283	81481472	(8856873)	C	MIR	SINE/MIR	(32)	230	31	1527363
2074	18.2	12.6	2.2	chr16	81481607	81481878	(8856467)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	186	1527364
240	20.2	2.3	7.7	chr16	81738004	81738094	(8600251)	+	MER5B	DNA/hAT-Charlie	20	105	(73)	1527902
265	26.7	6.2	2.2	chr16	81778622	81778713	(8559632)	C	MIRb	SINE/MIR	(93)	175	80	1528021
595	15.8	0.7	8.9	chr16	81778814	81778959	(8559386)	C	FLAM_C	SINE/Alu	(8)	135	2	1528022
1722	13.2	0.4	7.4	chr16	84143715	84144010	(6194335)	+	AluSz	SINE/Alu	1	275	(37)	1532216
31	16.1	0.0	0.0	chr16	84144038	84144095	(6194250)	+	(CTCCCT)n	Simple_repeat	1	58	(0)	1532217
517	32.7	1.5	1.2	chr16	84144114	84144328	(6194017)	C	MIRb	SINE/MIR	(19)	249	28	1532218
2941	25.8	6.3	2.1	chr16	85046675	85047999	(5290346)	C	L1MD2	LINE/L1	(5217)	1423	47	1534085
229	35.3	10.7	0.5	chr16	85306345	85306546	(5031799)	+	L3	LINE/CR1	3685	3909	(190)	1534600
1085	13.3	0.6	3.0	chr16	85306548	85306712	(5031633)	C	FRAM	SINE/Alu	(15)	161	1	1534601
2615	17.9	7.2	1.1	chr16	85334688	85335208	(5003137)	+	MER34C2	LTR/ERV1	1	555	(0)	1534656
1216	24.5	11.0	4.6	chr16	85402930	85403412	(4934933)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	1	1534781
205	31.0	2.7	1.4	chr16	85535934	85536005	(4802340)	C	L2a	LINE/L2	(15)	3411	3339	1535023
536	26.1	9.8	0.6	chr16	85561211	85561376	(4776969)	C	MIR	SINE/MIR	(79)	183	1	1535062
27	0.0	0.0	0.0	chr16	85611307	85611332	(4727013)	+	(CCCCTC)n	Simple_repeat	1	26	(0)	1535143
30	14.2	4.7	4.4	chr16	88561979	88562064	(1776281)	+	(CCATCCC)n	Simple_repeat	1	90	(0)	1540124
13	11.6	0.0	6.2	chr16	88651526	88651557	(1686788)	+	(CCTGG)n	Simple_repeat	1	32	(0)	1540274
140	18.5	2.6	3.6	chr16	88993555	88993906	(1344439)	+	(CCTTCCT)n	Simple_repeat	1	361	(0)	1540673
30	28.5	3.7	0.9	chr16	89035166	89035272	(1303073)	+	(CT)n	Simple_repeat	1	111	(0)	1540733
12	7.4	0.0	11.1	chr17	1399740	1399775	(81857666)	+	(CCTCCC)n	Simple_repeat	1	36	(0)	1547030
227	26.6	18.6	0.0	chr17	1490874	1491016	(81766425)	+	L2c	LINE/L2	3028	3198	(177)	1547242
13	14.2	3.2	0.0	chr17	1736687	1736717	(81520724)	+	(CCCGTC)n	Simple_repeat	1	32	(0)	1547694
3800	9.6	3.8	0.8	chr17	4002318	4002679	(79254762)	C	MER41A	LTR/ERV1	(186)	368	2	1552174
2360	14.7	15.2	0.0	chr17	6947859	6948288	(76309153)	+	LTR54	LTR/ERV1	1	507	(3)	1557949
13	16.3	2.1	6.1	chr17	7239468	7239500	(76017941)	+	(GCC)n	Simple_repeat	1	30	(0)	1558483
28	4.2	0.0	8.6	chr17	7239501	7239558	(76017883)	+	(CCT)n	Simple_repeat	1	58	(0)	1558484
13	16.3	2.1	6.1	chr17	7239559	7239572	(76017869)	+	(GCC)n	Simple_repeat	1	15	(0)	1558485
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
760	28.1	2.8	8.2	chr17	13638778	13638980	(69618461)	+	MIR	SINE/MIR	10	204	(58)	1570117
4297	11.5	0.9	0.6	chr17	13638981	13639610	(69617831)	+	MER41B	LTR/ERV1	3	634	(0)	1570118
351	31.3	6.4	2.2	chr17	15956497	15956590	(67300851)	C	HAL1ME	LINE/L1	(2276)	189	98	1573961
874	19.1	4.9	11.6	chr17	17417825	17417876	(65839565)	+	MLT1H	LTR/ERVL-MaLR	20	65	(484)	1576639
3383	14.5	8.8	4.6	chr17	17417877	17418549	(65838892)	+	LTR62	LTR/ERVL	3	706	(3)	1576640
287	33.6	6.3	0.0	chr17	17824042	17824160	(65433281)	+	MIRb	SINE/MIR	95	221	(47)	1577411
1469	14.6	8.2	1.0	chr17	18816348	18816746	(64440695)	C	LTR54	LTR/ERV1	(3)	431	1	1579185
6343	19.9	6.0	7.2	chr17	27088524	27090532	(56166909)	+	REP522	Satellite/telo	1	1983	(0)	1586174
219	24.6	8.8	4.0	chr17	27106509	27106584	(56150857)	C	MIRc	SINE/MIR	(187)	81	2	1586193
3515	13.9	6.2	1.5	chr17	27106621	27107224	(56150217)	C	MER41B	LTR/ERV1	(0)	634	1	1586194
1442	22.5	3.3	0.3	chr17	27569508	27569828	(55687613)	+	MER58B	DNA/hAT-Charlie	3	333	(8)	1587060
4148	15.3	0.8	0.5	chr17	27575049	27575680	(55681761)	C	MER41B	LTR/ERV1	(0)	634	1	1587068
203	30.4	3.7	9.7	chr17	27575681	27575701	(55681740)	+	L2c	LINE/L2	3376	3393	(33)	1587067
1569	23.3	12.9	0.5	chr17	27575796	27576217	(55681224)	C	MLT1E2	LTR/ERVL-MaLR	(8)	619	138	1587069
352	30.5	1.5	5.2	chr17	27908001	27908082	(55349359)	C	MIRb	SINE/MIR	(10)	258	179	1587646
4498	9.4	2.7	2.8	chr17	27908083	27908524	(55348917)	+	MER41B	LTR/ERV1	1	452	(182)	1587647
12	19.7	2.3	4.4	chr17	28812233	28812276	(54445165)	+	(CGCTC)n	Simple_repeat	1	45	(0)	1589376
11	29.8	1.6	3.2	chr17	28812417	28812477	(54444964)	+	(CCCCAGC)n	Simple_repeat	1	62	(0)	1589377
22	19.1	5.6	2.6	chr17	32897286	32897357	(50360084)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	1597604
43	0.0	0.0	0.0	chr17	32897359	32897395	(50360046)	+	(AC)n	Simple_repeat	1	37	(0)	1597605
386	28.2	9.2	7.3	chr17	33908254	33908498	(49348943)	+	MLT1O	LTR/ERVL-MaLR	147	396	(146)	1599543
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
17	20.3	0.0	5.4	chr17	38869952	38870007	(44387434)	+	(CGTGCC)n	Simple_repeat	1	56	(0)	1608780
1203	20.4	6.2	7.6	chr17	39013856	39014074	(44243367)	C	MER33	DNA/hAT-Charlie	(91)	233	1	1609124
838	9.1	11.2	1.4	chr17	39014134	39014172	(44243269)	+	MER21A	LTR/ERVL	1	41	(890)	1609126
4351	12.1	1.4	4.1	chr17	39014173	39014879	(44242562)	+	LTR8	LTR/ERV1	1	688	(3)	1609127
10597	5.0	1.4	0.5	chr17	39333171	39334488	(43922953)	+	SVA_B	Retroposon/SVA	54	1383	(0)	1609821
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
16	23.6	0.0	0.0	chr17	40069008	40069042	(43188399)	+	(GT)n	Simple_repeat	1	35	(0)	1611299
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
15	7.8	0.0	3.5	chr17	40099088	40099116	(43158325)	+	(GGCGG)n	Simple_repeat	1	29	(0)	1611348
17	0.0	0.0	0.0	chr17	40443293	40443313	(42814128)	+	(GCG)n	Simple_repeat	1	21	(0)	1612057
18	21.5	0.0	5.1	chr17	40443327	40443385	(42814056)	+	(CCCCCT)n	Simple_repeat	1	59	(0)	1612058
12	15.8	2.6	5.0	chr17	40443451	40443489	(42813952)	+	(GCCCCTC)n	Simple_repeat	1	40	(0)	1612059
857	19.9	8.6	0.0	chr17	41678325	41678495	(41578946)	+	LTR27D	LTR/ERV1	287	473	(142)	1614027
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
371	23.4	4.1	2.1	chr17	41692484	41692579	(41564862)	+	Tigger3a	DNA/TcMar-Tigger	1	98	(250)	1614057
2317	10.3	0.3	0.0	chr17	42320448	42320748	(40936693)	+	AluSx	SINE/Alu	1	302	(10)	1615361
3928	10.0	0.2	0.0	chr17	43352269	43352788	(39904653)	C	MER41C	LTR/ERV1	(0)	521	1	1617616
3905	10.1	0.7	0.0	chr17	43352789	43353333	(39904108)	C	PRIMA41-int	LTR/ERV1	(0)	7756	7208	1617616
1420	15.9	15.3	0.4	chr17	44288102	44288352	(38969089)	C	AluJb	SINE/Alu	(16)	296	2	1619616
208	24.7	6.1	3.8	chr17	44288574	44288653	(38968788)	+	L2b	LINE/L2	2482	2563	(856)	1619617
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
249	34.5	5.6	1.8	chr17	45345630	45345800	(37911641)	C	MamRep434	DNA/TcMar-Tigger	(99)	327	150	1621862
16	14.5	0.0	0.0	chr17	45579995	45580025	(37677416)	+	(CTCC)n	Simple_repeat	1	31	(0)	1622324
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
23	13.3	0.0	0.0	chr17	46225507	46225547	(37031894)	+	(GTCTCT)n	Simple_repeat	1	41	(0)	1623617
9985	5.6	2.7	4.7	chr17	46252374	46253788	(37003653)	C	SVA_D	Retroposon/SVA	(0)	1386	1	1623705
190	27.2	0.9	16.8	chr17	46742718	46742854	(36514587)	C	L2c	LINE/L2	(35)	3352	3238	1624647
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
25	23.2	1.2	3.7	chr17	47649892	47649972	(35607469)	+	(TCCC)n	Simple_repeat	1	82	(0)	1626488
23	12.0	2.1	2.1	chr17	47650536	47650582	(35606859)	+	(CCTCCC)n	Simple_repeat	1	48	(0)	1626491
2318	19.0	6.4	0.5	chr17	48491697	48492045	(34765396)	C	MER41B	LTR/ERV1	(126)	508	132	1627976
12	17.5	0.0	5.6	chr17	48555184	48555219	(34702222)	+	GA-rich	Low_complexity	1	36	(0)	1628090
65	12.5	4.7	0.8	chr17	48555273	48555400	(34702041)	+	GA-rich	Low_complexity	1	134	(0)	1628090
26	20.3	0.0	0.0	chr17	48555970	48556020	(34701421)	+	(CA)n	Simple_repeat	1	51	(0)	1628092
17	15.4	0.0	2.6	chr17	48626805	48626842	(34630599)	+	G-rich	Low_complexity	1	38	(0)	1628158
4579	9.7	2.2	1.0	chr17	48825536	48825977	(34431464)	C	MER41B	LTR/ERV1	(184)	450	1	1628573
495	29.0	7.1	0.0	chr17	48826001	48826169	(34431272)	+	MIRb	SINE/MIR	20	201	(67)	1628576
16	14.2	0.0	0.0	chr17	48972489	48972519	(34284922)	+	(CACCCC)n	Simple_repeat	1	31	(0)	1628950
251	12.5	2.0	2.0	chr17	48995060	48995108	(34262333)	C	L2a	LINE/L2	(5)	3421	3373	1629008
3820	10.5	2.1	0.4	chr17	49076572	49077089	(34180352)	C	MER41B	LTR/ERV1	(107)	527	1	1629162
822	24.3	3.8	1.0	chr17	49077101	49077304	(34180137)	C	LTR108e_Mam	LTR/ERVL	(28)	520	311	1629165
14	18.4	8.2	0.0	chr17	49879575	49879623	(33377818)	+	(CCTC)n	Simple_repeat	1	53	(0)	1630745
4337	7.1	1.4	0.0	chr17	50319306	50319851	(32937590)	C	MER41A	LTR/ERV1	(0)	554	1	1631549
1741	29.2	6.4	3.3	chr17	50319852	50319950	(32937491)	+	ERV3-16A3_I-int	LTR/ERVL	1426	1527	(3469)	1631548
2463	15.3	1.8	2.9	chr17	50448504	50448953	(32808488)	C	MER65A	LTR/ERV1	(0)	445	1	1631806
239	20.4	5.0	9.6	chr17	50448989	50449008	(32808433)	C	L1MD3	LINE/L1	(2064)	5931	5910	1631807
2288	12.3	0.0	0.0	chr17	50449009	50449316	(32808125)	C	AluSx1	SINE/Alu	(4)	308	1	1631808
30	10.0	0.0	0.0	chr17	54861065	54861108	(28396333)	+	(AC)n	Simple_repeat	1	44	(0)	1638660
23	19.4	3.6	0.0	chr17	54861112	54861172	(28396269)	+	(TACATA)n	Simple_repeat	1	63	(0)	1638661
296	27.9	9.3	9.9	chr17	57365346	57365700	(25891741)	C	L2a	LINE/L2	(0)	3426	3079	1643152
21	16.2	2.0	2.0	chr17	58083200	58083251	(25174190)	+	(CCCTCC)n	Simple_repeat	1	52	(0)	1644417
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2263	7.3	0.0	0.4	chr17	59842395	59842669	(23414772)	+	AluSx	SINE/Alu	1	274	(38)	1648068
517	18.1	0.0	1.2	chr17	59843641	59843723	(23413718)	+	AluJr	SINE/Alu	1	82	(230)	1648070
2192	8.6	3.6	0.3	chr17	59843731	59844022	(23413419)	+	AluSp	SINE/Alu	1	302	(11)	1648071
1433	21.1	3.3	0.0	chr17	59844108	59844372	(23413069)	C	AluJb	SINE/Alu	(37)	275	2	1648073
2275	11.1	1.6	0.0	chr17	59844392	59844697	(23412744)	+	AluSz	SINE/Alu	1	311	(1)	1648074
3319	16.5	9.1	7.2	chr17	60469418	60470258	(22787183)	C	L1MB4	LINE/L1	(0)	6180	5323	1649321
1712	16.9	5.8	0.4	chr17	61175124	61175401	(22082040)	+	AluJr	SINE/Alu	1	294	(18)	1650621
623	16.5	0.0	0.0	chr17	61175591	61175699	(22081742)	C	L1MA7	LINE/L1	(664)	5627	5519	1650620
2382	9.3	0.3	0.6	chr17	62170930	62171241	(21086200)	+	AluSx3	SINE/Alu	1	311	(0)	1652428
646	11.8	0.0	1.1	chr17	62171314	62171407	(21086034)	C	AluSx	SINE/Alu	(14)	298	206	1652429
865	13.7	0.0	0.0	chr17	62171408	62171531	(21085910)	C	AluSx	SINE/Alu	(188)	124	1	1652429
2220	12.7	0.0	0.0	chr17	62634307	62634598	(20622843)	C	AluSg	SINE/Alu	(18)	292	1	1653401
4012	14.4	1.6	2.5	chr17	62634599	62634826	(20622615)	C	MER41B	LTR/ERV1	(405)	229	1	1653400
2263	12.3	0.0	0.0	chr17	62634831	62635130	(20622311)	C	AluSx	SINE/Alu	(12)	300	1	1653402
261	26.5	1.7	5.2	chr17	63460088	63460206	(19797235)	+	L2b	LINE/L2	3054	3166	(221)	1654738
3681	8.7	2.7	3.6	chr17	63460261	63460786	(19796655)	+	MER41C	LTR/ERV1	1	521	(0)	1654739
255	25.2	6.6	10.7	chr17	64922924	64923023	(18334418)	C	L1MEi	LINE/L1	(1525)	687	601	1657602
784	29.8	6.3	3.3	chr17	64923050	64923354	(18334087)	C	L1MEi	LINE/L1	(1883)	329	15	1657602
2410	9.1	0.0	0.0	chr17	67373967	67374264	(15883177)	C	AluSz	SINE/Alu	(14)	298	1	1661907
722	17.2	9.4	5.0	chr17	67374265	67374290	(15883151)	+	L1MD3	LINE/L1	7083	7101	(894)	1661905
255	31.7	10.7	2.7	chr17	69093102	69093178	(14164263)	+	MIR3	SINE/MIR	44	133	(75)	1665203
3551	12.1	1.3	1.1	chr17	69093179	69093714	(14163727)	+	HERV1_LTRe	LTR/ERV1	1	537	(0)	1665204
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
17	10.0	2.9	2.8	chr17	74868688	74868722	(8388719)	+	(TTCC)n	Simple_repeat	1	36	(0)	1674906
800	13.9	6.7	5.7	chr17	74876368	74876514	(8380927)	+	MER20	DNA/hAT-Charlie	42	194	(25)	1674921
2236	10.5	0.3	0.3	chr17	74876515	74876809	(8380632)	+	AluSx1	SINE/Alu	1	295	(17)	1674922
2818	13.1	3.6	0.0	chr17	76601713	76602163	(6655278)	C	MER41B	LTR/ERV1	(166)	468	1	1678372
2326	11.0	0.0	1.0	chr17	76602300	76602608	(6654833)	+	AluSx1	SINE/Alu	1	306	(6)	1678373
229	26.6	3.0	0.0	chr17	76640530	76640593	(6616848)	+	MLT1K	LTR/ERVL-MaLR	530	595	(0)	1678441
248	33.9	3.4	3.4	chr17	76640603	76640865	(6616576)	+	L1M5	LINE/L1	4967	5229	(917)	1678442
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
758	16.5	0.0	0.0	chr17	77109279	77109399	(6148042)	C	AluJr	SINE/Alu	(187)	125	5	1679472
1527	16.3	6.2	9.5	chr17	77109400	77109649	(6147792)	C	LTR54	LTR/ERV1	(259)	251	1	1679471
6948	7.7	2.7	0.0	chr17	78082075	78082947	(5174494)	C	MER11D	LTR/ERVK	(0)	897	1	1681170
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
864	20.7	6.5	2.5	chr17	79011382	79011619	(4245822)	C	L1ME3D	LINE/L1	(95)	6147	5900	1682844
4410	12.1	1.9	0.2	chr17	79011645	79012265	(4245176)	+	MER41B	LTR/ERV1	3	634	(0)	1682845
467	32.7	4.9	3.1	chr17	80254896	80255154	(3002287)	+	L1ME3G	LINE/L1	308	571	(353)	1684750
324	26.5	9.0	2.6	chr17	81349862	81350016	(1907425)	+	MLT1J1-int	LTR/ERVL-MaLR	342	507	(880)	1686147
1022	18.6	7.7	2.1	chr17	82215061	82215340	(1042101)	+	MLT1B	LTR/ERVL-MaLR	84	380	(10)	1687351
14	9.6	2.6	7.5	chr17	82231194	82231234	(1026207)	+	(CCCG)n	Simple_repeat	1	38	(0)	1687366
152	20.1	1.9	3.6	chr17	82293107	82293531	(963910)	+	G-rich	Low_complexity	1	417	(0)	1687437
2565	20.3	1.5	1.1	chr17	82338920	82339456	(917985)	+	MER41G	LTR/ERV1	347	885	(0)	1687504
156	18.1	1.6	0.6	chr17	82648573	82648887	(608554)	+	G-rich	Low_complexity	1	320	(0)	1688031
3583	7.4	2.6	0.0	chr18	874031	874487	(79498798)	C	MER41A	LTR/ERV1	(85)	469	1	1690658
11097	8.2	1.9	2.5	chr18	874488	876030	(79497255)	C	MER41-int	LTR/ERV1	(2)	5944	4411	1690658
1243	23.4	5.6	0.6	chr18	2325007	2325328	(78047957)	+	MER58B	DNA/hAT-Charlie	1	339	(2)	1692508
920	21.4	2.4	7.3	chr18	2325329	2325424	(78047861)	+	L1MC5a	LINE/L1	1944	2018	(759)	1692505
3466	13.6	1.9	0.0	chr18	2325511	2326038	(78047247)	+	LTR45C	LTR/ERV1	1	538	(1)	1692509
21	12.6	2.2	2.2	chr18	3594322	3594366	(76778919)	+	(CTCC)n	Simple_repeat	1	46	(0)	1694719
23	15.5	6.0	0.0	chr18	5296223	5296272	(75077013)	+	(GC)n	Simple_repeat	1	53	(0)	1697045
14	14.3	8.3	1.9	chr18	5296391	5296438	(75076847)	+	(CGCCGG)n	Simple_repeat	1	52	(0)	1697046
676	17.4	0.9	0.0	chr18	8979290	8979398	(71393887)	C	AluJo	SINE/Alu	(202)	110	1	1702201
2155	11.2	0.3	1.0	chr18	9009364	9009659	(71363626)	+	AluSp	SINE/Alu	1	294	(19)	1702259
28	18.2	6.6	0.0	chr18	9104657	9104732	(71268553)	+	(TCCC)n	Simple_repeat	1	81	(0)	1702466
316	23.1	6.9	6.2	chr18	9104802	9104930	(71268355)	C	L1ME4a	LINE/L1	(7)	6117	5988	1702467
1486	14.1	0.0	3.0	chr18	9803225	9803458	(70569827)	C	AluJo	SINE/Alu	(1)	311	85	1703691
7327	18.6	3.1	5.0	chr18	9875048	9875844	(70497441)	+	L1MC3	LINE/L1	6212	7003	(782)	1703784
2435	8.0	0.0	0.0	chr18	9875845	9876144	(70497141)	+	AluY	SINE/Alu	1	300	(11)	1703789
7327	18.6	3.1	5.0	chr18	9876145	9876951	(70496334)	+	L1MC3	LINE/L1	7004	7785	(0)	1703784
197	23.4	11.5	6.1	chr18	9899231	9899312	(70473973)	C	L3b	LINE/CR1	(12)	5220	5134	1703834
1773	17.9	0.7	0.7	chr18	9899397	9899686	(70473599)	C	AluJr	SINE/Alu	(17)	295	6	1703835
53	0.0	0.0	0.0	chr18	12607597	12607641	(67765644)	+	(AC)n	Simple_repeat	1	45	(0)	1707764
1925	16.5	9.3	1.9	chr18	22468269	22468645	(57904640)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1714603
1137	14.9	0.5	0.0	chr18	22468689	22468896	(57904389)	C	L1M1	LINE/L1	(7294)	271	63	1714604
1792	21.9	18.7	7.7	chr18	31821645	31822323	(48550962)	+	LTR19C	LTR/ERV1	7	777	(2)	1728255
187	29.3	6.5	0.0	chr18	35046189	35046246	(45327039)	C	L2b	LINE/L2	(0)	3375	3314	1732783
255	34.7	3.1	0.0	chr18	35046295	35046389	(45326896)	C	Tigger19a	DNA/TcMar-Tigger	(114)	209	112	1732784
3738	23.3	6.9	3.0	chr18	35110465	35111601	(45261684)	C	L1MEf	LINE/L1	(4480)	1935	751	1732859
864	15.3	5.8	0.6	chr18	35174227	35174390	(45198895)	+	MLT1B	LTR/ERVL-MaLR	1	173	(217)	1732946
20	31.6	0.0	0.0	chr18	35174406	35174468	(45198817)	+	(CTCT)n	Simple_repeat	1	63	(0)	1732947
12	16.8	7.5	0.0	chr18	35174475	35174514	(45198771)	+	(CCCCCA)n	Simple_repeat	1	43	(0)	1732948
2328	4.3	1.5	0.0	chr18	35240456	35240713	(45132572)	C	AluY	SINE/Alu	(8)	303	42	1733038
4657	9.1	0.6	1.6	chr18	46161722	46162235	(34211050)	C	MER41B	LTR/ERV1	(118)	516	2	1748151
1797	26.1	4.8	4.8	chr18	48728382	48728924	(31644361)	C	MLT1F	LTR/ERVL-MaLR	(0)	560	18	1752359
14	12.3	5.4	2.6	chr18	48828892	48828928	(31544357)	+	(CCT)n	Simple_repeat	1	39	(0)	1752501
31	29.5	0.0	0.0	chr18	75205716	75205802	(5167483)	+	A-rich	Low_complexity	1	87	(0)	1790755
1779	12.8	0.4	0.4	chr19	791376	791626	(57825990)	C	AluSx1	SINE/Alu	(16)	296	46	1797627
230	25.8	0.0	0.4	chr19	844093	844154	(57773462)	C	L2b	LINE/L2	(3)	3423	3327	1797734
414	26.9	0.7	8.2	chr19	844696	844819	(57772797)	+	L2a	LINE/L2	3292	3412	(14)	1797735
1733	14.8	3.1	5.4	chr19	844820	844946	(57772670)	+	AluJr	SINE/Alu	1	123	(189)	1797736
2303	11.0	0.0	0.0	chr19	844947	845247	(57772369)	C	AluSz6	SINE/Alu	(11)	301	1	1797737
2112	12.3	0.0	1.7	chr19	951854	952154	(57665462)	+	AluSx	SINE/Alu	1	296	(16)	1797959
11	17.5	1.9	9.1	chr19	1208019	1208072	(57409544)	+	(CTGCC)n	Simple_repeat	1	55	(0)	1798411
1654	13.1	4.5	1.9	chr19	1270486	1270744	(57346872)	+	AluJo	SINE/Alu	1	266	(46)	1798485
249	21.0	3.6	8.0	chr19	1747795	1747882	(56869734)	+	L2c	LINE/L2	3066	3149	(238)	1799452
2315	8.2	1.9	0.7	chr19	2961804	2962107	(55655509)	C	AluY	SINE/Alu	(3)	308	1	1802024
369	29.6	2.3	0.0	chr19	2962110	2962234	(55655382)	+	L1ME1	LINE/L1	6039	6166	(13)	1802025
42	30.4	5.0	1.3	chr19	3366345	3366566	(55251050)	+	G-rich	Low_complexity	1	233	(0)	1803067
11	19.8	8.2	3.0	chr19	4066330	4066390	(54551226)	+	(CTCCCCG)n	Simple_repeat	1	66	(0)	1804654
1219	20.2	5.4	0.8	chr19	5627198	5627444	(52990172)	+	AluJr	SINE/Alu	1	259	(53)	1808480
2308	5.8	1.4	0.0	chr19	5689664	5689940	(52927676)	C	AluY	SINE/Alu	(30)	281	1	1808597
288	31.2	9.4	0.0	chr19	5689973	5690068	(52927548)	C	MIR	SINE/MIR	(108)	154	49	1808598
27	35.1	0.7	3.5	chr19	5799137	5799278	(52818338)	+	(TC)n	Simple_repeat	1	143	(0)	1808879
18	19.5	2.0	2.0	chr19	7903905	7903953	(50713663)	+	(GGC)n	Simple_repeat	1	50	(0)	1813951
17	13.4	7.8	1.8	chr19	7904076	7904126	(50713490)	+	G-rich	Low_complexity	1	55	(0)	1813952
17	31.5	2.6	0.0	chr19	8609153	8609230	(50008386)	+	(TGTGTG)n	Simple_repeat	1	80	(0)	1815704
29	0.0	0.0	0.0	chr19	8609235	8609259	(50008357)	+	(TG)n	Simple_repeat	1	25	(0)	1815705
300	30.4	8.2	1.1	chr19	8664240	8664359	(49953257)	C	MIR3	SINE/MIR	(113)	155	28	1815870
708	18.6	0.0	0.0	chr19	11132791	11132903	(47484713)	+	FRAM	SINE/Alu	42	154	(22)	1821525
1886	15.2	1.3	2.5	chr19	11132911	11133225	(47484391)	+	AluJo	SINE/Alu	1	311	(1)	1821526
400	22.1	17.4	1.8	chr19	11536309	11536491	(47081125)	+	MIR	SINE/MIR	38	251	(11)	1822593
561	4.6	0.0	9.7	chr19	11536501	11536606	(47081010)	C	FLAM_C	SINE/Alu	(1)	132	43	1822594
1270	18.7	7.0	0.4	chr19	12882516	12882756	(45734860)	C	AluJb	SINE/Alu	(12)	300	43	1825444
3404	15.1	7.2	8.2	chr19	12882804	12882934	(45734682)	+	LTR8A	LTR/ERV1	1	132	(595)	1825445
1905	10.6	0.7	8.1	chr19	12882935	12883255	(45734361)	C	AluSz	SINE/Alu	(15)	297	1	1825446
26	21.7	1.0	6.2	chr19	13118791	13118886	(45498730)	+	G-rich	Low_complexity	1	97	(0)	1825910
11	29.1	3.0	2.9	chr19	13936153	13936218	(44681398)	+	(CCCCAAC)n	Simple_repeat	1	68	(0)	1828155
181	23.9	4.3	4.3	chr19	13936318	13936387	(44681229)	C	L3	LINE/CR1	(2269)	1830	1761	1828156
749	28.3	14.1	4.9	chr19	17671903	17672330	(40945286)	+	MLT1J	LTR/ERVL-MaLR	1	474	(38)	1836968
20	7.2	0.0	0.0	chr19	18282216	18282245	(40335371)	+	(CCCT)n	Simple_repeat	1	30	(0)	1838530
311	26.9	6.3	2.5	chr19	18282357	18282478	(40335138)	C	MIR3	SINE/MIR	(52)	156	30	1838531
11	16.9	2.9	2.8	chr19	18388462	18388496	(40229120)	+	(GCGCCT)n	Simple_repeat	1	36	(0)	1838793
31	11.4	0.0	0.0	chr19	18415571	18415619	(40201997)	+	(GGA)n	Simple_repeat	1	49	(0)	1838862
254	38.0	0.0	0.0	chr19	18415660	18415772	(40201844)	C	L2a	LINE/L2	(308)	3118	3006	1838863
364	27.8	6.5	0.9	chr19	18417204	18417319	(40200297)	+	L2c	LINE/L2	3260	3382	(5)	1838866
196	20.0	5.2	0.0	chr19	18544021	18544075	(40073541)	C	MIR3	SINE/MIR	(69)	139	82	1839068
4387	7.6	0.2	0.0	chr19	28522096	28522646	(30094970)	+	MER41A	LTR/ERV1	3	554	(0)	1848916
12670	12.0	3.3	1.4	chr19	28525895	28528650	(30088966)	+	PABL_A-int	LTR/ERV1	2332	5944	(2)	1848916
4370	8.0	0.0	0.7	chr19	28528651	28529205	(30088411)	+	MER41A	LTR/ERV1	1	551	(3)	1848916
33644	14.7	1.4	1.7	chr19	28607468	28613524	(30004092)	+	HERVE-int	LTR/ERV1	512	6548	(1265)	1849048
1527	22.0	7.8	6.4	chr19	28614818	28615273	(30002343)	+	LTR2	LTR/ERV1	1	463	(0)	1849048
1105	11.6	3.6	1.0	chr19	32686829	32687020	(25930596)	C	LTR51	LTR/ERV1	(78)	593	397	1855306
451	7.8	3.0	0.0	chr19	32687022	32687085	(25930531)	+	MER41B	LTR/ERV1	1	66	(568)	1855307
615	12.3	19.7	0.0	chr19	32687086	32687199	(25930417)	+	LTR9	LTR/ERV1	1	142	(470)	1855308
4497	9.9	3.9	0.2	chr19	35165102	35165711	(23451905)	C	MER41B	LTR/ERV1	(0)	634	1	1859854
1109	17.3	4.7	2.6	chr19	35165712	35165781	(23451835)	C	Tigger4a	DNA/TcMar-Tigger	(171)	65	1	1859853
897	18.6	4.7	0.0	chr19	35165817	35166045	(23451571)	C	L2a	LINE/L2	(310)	3116	2868	1859852
4376	7.0	1.3	0.0	chr19	35204673	35205219	(23412397)	C	MER41A	LTR/ERV1	(0)	554	1	1859931
555	25.1	10.3	1.4	chr19	35205270	35205548	(23412068)	C	L2b	LINE/L2	(195)	3231	2931	1859932
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
876	24.5	1.9	4.0	chr19	38882763	38883069	(19734547)	+	LTR82A	LTR/ERVL	10	297	(533)	1867661
2443	8.5	0.0	2.5	chr19	38883070	38883388	(19734228)	C	AluSq2	SINE/Alu	(2)	311	1	1867662
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
24	10.9	0.0	0.0	chr19	40285268	40285307	(18332309)	+	(CGGCAG)n	Simple_repeat	1	40	(0)	1870651
7224	10.4	1.8	0.2	chr19	40822624	40823609	(17794007)	+	LTR5B	LTR/ERVK	1	1002	(0)	1872027
13	23.8	3.9	1.9	chr19	41928395	41928445	(16689171)	+	(GCGG)n	Simple_repeat	1	53	(0)	1874189
35	9.8	0.0	0.0	chr19	41928464	41928518	(16689098)	+	(CTC)n	Simple_repeat	1	55	(0)	1874190
12	19.7	0.0	5.1	chr19	41928531	41928569	(16689047)	+	(GCCC)n	Simple_repeat	1	39	(0)	1874191
19	14.3	2.6	0.0	chr19	41928590	41928628	(16688988)	+	(GGC)n	Simple_repeat	1	40	(0)	1874192
14	18.6	2.7	0.0	chr19	41928741	41928777	(16688839)	+	G-rich	Low_complexity	1	38	(0)	1874193
2394	5.9	1.0	0.0	chr19	44501074	44501363	(14116253)	C	AluSq2	SINE/Alu	(2)	311	19	1878831
1108	29.7	4.3	6.2	chr19	44501364	44501849	(14115767)	+	L2a	LINE/L2	2952	3425	(1)	1878830
17	13.2	1.6	9.7	chr19	45780645	45780706	(12836910)	+	GA-rich	Low_complexity	1	57	(0)	1882240
213	26.0	6.5	2.5	chr19	45883360	45883459	(12734157)	+	MIRc	SINE/MIR	60	166	(64)	1882485
2053	12.7	0.0	0.4	chr19	46194540	46194814	(12422802)	+	AluSx1	SINE/Alu	1	274	(38)	1883096
20	0.0	0.0	0.0	chr19	46194831	46194852	(12422764)	+	(TA)n	Simple_repeat	1	22	(0)	1883097
30	0.0	0.0	0.0	chr19	46194853	46194880	(12422736)	+	(T)n	Simple_repeat	1	28	(0)	1883098
1799	17.6	1.4	0.3	chr19	46195020	46195308	(12422308)	C	AluSz	SINE/Alu	(16)	296	5	1883100
528	28.6	6.3	1.8	chr19	46195320	46195547	(12422069)	+	LTR24B	LTR/ERV1	187	425	(151)	1883101
2447	13.0	13.4	0.7	chr19	46202976	46203386	(12414230)	C	LTR7C	LTR/ERV1	(0)	471	1	1883114
276	27.6	7.0	4.6	chr19	46413580	46413731	(12203885)	C	LTR104_Mam	LTR/Gypsy	(698)	811	656	1883596
22	6.6	0.0	0.0	chr19	46860910	46860941	(11756675)	+	(GAGG)n	Simple_repeat	1	32	(0)	1884770
18	22.1	0.0	0.0	chr19	46860965	46861001	(11756615)	+	(C)n	Simple_repeat	1	37	(0)	1884771
13	22.7	2.3	2.3	chr19	46861010	46861052	(11756564)	+	(GCG)n	Simple_repeat	1	44	(0)	1884772
24	11.1	6.1	0.0	chr19	46861071	46861119	(11756497)	+	(CCG)n	Simple_repeat	1	52	(0)	1884773
12	25.8	0.0	0.0	chr19	47273279	47273315	(11344301)	+	G-rich	Low_complexity	1	37	(0)	1885715
1487	9.0	1.0	1.0	chr19	48254471	48254670	(10362946)	+	AluSx3	SINE/Alu	1	200	(111)	1888294
2155	15.2	6.5	3.7	chr19	48254703	48255085	(10362531)	+	MER65A	LTR/ERV1	3	406	(39)	1888295
5186	16.2	2.2	0.6	chr19	48891607	48892494	(9725122)	C	LTR5B	LTR/ERVK	(2)	1000	98	1889877
1138	16.2	2.1	0.0	chr19	48899753	48899937	(9717679)	+	AluJb	SINE/Alu	120	308	(4)	1889898
27	3.3	0.0	0.0	chr19	48950828	48950858	(9666758)	+	(AAAAC)n	Simple_repeat	1	31	(0)	1890049
2199	9.7	1.0	0.0	chr19	48950859	48950869	(9666747)	+	AluSc	SINE/Alu	282	292	(17)	1890048
1929	18.2	0.3	0.0	chr19	48950876	48951183	(9666433)	+	AluJb	SINE/Alu	2	310	(2)	1890050
323	28.9	12.2	5.2	chr19	49578936	49579291	(9038325)	+	L1MC5a	LINE/L1	8716	9057	(247)	1891446
2218	15.6	13.3	0.2	chr19	49579292	49579734	(9037882)	+	LTR54	LTR/ERV1	1	510	(0)	1891461
19	20.3	0.0	0.0	chr19	49591155	49591199	(9026417)	+	(CCCCGCC)n	Simple_repeat	1	45	(0)	1891488
16	11.7	0.0	0.0	chr19	49591232	49591259	(9026357)	+	(GGC)n	Simple_repeat	1	28	(0)	1891489
16	20.2	0.0	4.1	chr19	49591443	49591491	(9026125)	+	(CCCCCTC)n	Simple_repeat	1	49	(0)	1891490
19	3.2	6.2	0.0	chr19	49591600	49591633	(9025983)	+	(CCCT)n	Simple_repeat	1	36	(0)	1891491
29	0.0	0.0	0.0	chr19	49591791	49591818	(9025798)	+	(GCCGG)n	Simple_repeat	1	28	(0)	1891492
12	28.1	1.7	3.3	chr19	50500436	50500494	(8117122)	+	(TCCCCC)n	Simple_repeat	1	60	(0)	1893651
11558	17.2	2.7	1.5	chr19	51465903	51468055	(7149561)	+	L1M2	LINE/L1	3133	5315	(982)	1895683
12	14.7	3.3	0.0	chr19	51691132	51691161	(6926455)	+	(CCAGCC)n	Simple_repeat	1	31	(0)	1896054
96	28.0	5.8	1.5	chr19	51691175	51691606	(6926010)	+	GA-rich	Low_complexity	1	457	(0)	1896055
4289	7.3	0.5	0.2	chr19	51787119	51787670	(6829946)	+	MER41A	LTR/ERV1	1	554	(0)	1896255
2484	13.1	8.3	1.2	chr19	51800313	51800738	(6816878)	C	LTR46	LTR/ERV1	(0)	460	2	1896275
12	19.6	0.0	5.1	chr19	52190438	52190476	(6427140)	+	(GGCTGG)n	Simple_repeat	1	39	(0)	1896965
5433	16.1	3.4	1.4	chr19	52936055	52937035	(5680581)	+	LTR5B	LTR/ERVK	2	1002	(0)	1898502
34	28.6	3.6	5.2	chr19	56141476	56141698	(2475918)	+	G-rich	Low_complexity	1	231	(0)	1905200
55	16.3	6.8	1.3	chr2	8681665	8681812	(233511717)	+	(CCCTCCT)n	Simple_repeat	1	158	(0)	1921728
4767	8.3	0.9	2.0	chr2	9169203	9169843	(233023686)	C	MER41B	LTR/ERV1	(0)	634	1	1922479
312	23.9	4.1	0.0	chr2	9170003	9170073	(233023456)	+	MER105	DNA/hAT-Charlie	1	74	(129)	1922480
288	32.3	1.1	0.0	chr2	10278577	10278669	(231914860)	C	MLT1J2	LTR/ERVL-MaLR	(93)	419	326	1924501
387	24.4	14.0	0.0	chr2	10278673	10278795	(231914734)	C	MLT1J2	LTR/ERVL-MaLR	(305)	143	1	1924501
53	0.0	0.0	0.0	chr2	11132998	11133042	(231060487)	+	(CA)n	Simple_repeat	1	45	(0)	1926079
252	29.2	2.8	5.4	chr2	11900290	11900401	(230293128)	+	L2c	LINE/L2	3054	3162	(225)	1927436
1946	16.9	10.1	3.0	chr2	11900422	11900515	(230293014)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	364	1927437
4360	6.6	1.3	0.2	chr2	11900516	11901063	(230292466)	+	MER41A	LTR/ERV1	1	554	(0)	1927438
4775	9.9	1.3	0.2	chr2	12083869	12084495	(230109034)	+	MER41B	LTR/ERV1	1	634	(0)	1927744
7194	8.7	0.3	0.0	chr2	20501252	20502198	(221691331)	C	LTR5A	LTR/ERVK	(83)	950	1	1940484
1537	19.3	5.6	6.0	chr2	20502203	20502364	(221691165)	+	Tigger9b	DNA/TcMar-Tigger	244	417	(207)	1940485
2284	12.0	0.3	0.0	chr2	26749485	26749793	(215443736)	+	AluSx	SINE/Alu	1	310	(2)	1950530
455	25.4	9.1	15.1	chr2	26749794	26749864	(215443665)	C	L1MC5a	LINE/L1	(96)	2681	2635	1950529
6908	10.5	0.5	4.4	chr2	26749865	26750871	(215442658)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1950531
228	25.9	8.4	0.0	chr2	26758485	26758586	(215434943)	+	L2c	LINE/L2	3026	3139	(248)	1950549
13	17.7	2.5	2.4	chr2	27092696	27092708	(215100821)	+	(CCTGCTT)n	Simple_repeat	1	39	(0)	1951162
13	8.5	4.0	0.0	chr2	27092709	27092733	(215100796)	+	(CTTC)n	Simple_repeat	1	26	(0)	1951163
213	27.6	7.9	4.5	chr2	27092902	27093011	(215100518)	C	MIR1_Amn	SINE/MIR	(100)	130	17	1951164
25	27.4	4.2	0.0	chr2	28392892	28392933	(213800596)	+	(CGAG)n	Simple_repeat	1	71	(29)	1953485
23	11.2	0.0	0.0	chr2	28392934	28392972	(213800557)	+	(GAGAGA)n	Simple_repeat	1	39	(0)	1953486
25	27.4	4.2	0.0	chr2	28392973	28392987	(213800542)	+	(CGAG)n	Simple_repeat	72	100	(0)	1953485
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
277	30.0	6.4	9.1	chr2	39149984	39150120	(203043409)	+	MLT1H2	LTR/ERVL-MaLR	199	330	(219)	1970659
766	19.9	7.0	2.9	chr2	39150209	39150439	(203043090)	+	MLT1H2	LTR/ERVL-MaLR	284	555	(0)	1970659
4212	8.2	0.6	1.6	chr2	39468180	39468739	(202724790)	+	MER41A	LTR/ERV1	1	554	(0)	1971259
43	13.8	0.0	0.0	chr2	39779337	39779409	(202414120)	+	(GGGAGA)n	Simple_repeat	1	73	(0)	1971734
472	22.1	14.0	2.9	chr2	39779499	39779658	(202413871)	C	MIR3	SINE/MIR	(14)	194	20	1971735
308	25.0	14.5	5.1	chr2	43294223	43294340	(198899189)	C	L2c	LINE/L2	(14)	3373	3243	1977249
318	32.5	10.9	3.5	chr2	43294405	43294742	(198898787)	C	L2c	LINE/L2	(353)	3066	2701	1977249
4595	9.4	0.8	0.5	chr2	46753518	46754147	(195439382)	C	MER41B	LTR/ERV1	(0)	634	3	1982754
1459	26.1	10.8	2.3	chr2	46754148	46754580	(195438949)	C	Tigger13a	DNA/TcMar-Tigger	(164)	607	131	1982753
407	21.8	12.1	7.9	chr2	47297833	47297958	(194895571)	+	MamTip1	DNA/hAT-Tip100	1	128	(139)	1983750
3763	13.0	8.8	0.9	chr2	47297959	47298541	(194894988)	+	MER41B	LTR/ERV1	1	634	(0)	1983751
4700	4.0	0.0	2.5	chr2	47697467	47698038	(194495491)	C	LTR6B	LTR/ERV1	(0)	558	1	1984582
3352	18.6	1.4	7.4	chr2	47698039	47698280	(194495249)	+	LTR8	LTR/ERV1	3	230	(461)	1984583
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
311	15.6	18.2	1.1	chr2	60885224	60885314	(181308215)	+	MER53	DNA/hAT	70	179	(14)	2003278
236	13.2	1.9	0.0	chr2	60885272	60885324	(181308205)	C	MER53	DNA/hAT	(126)	67	14	2003279
13	21.0	4.5	0.0	chr2	61470531	61470574	(180722955)	+	(CCGCCCG)n	Simple_repeat	1	46	(0)	2004393
23708	9.2	0.7	2.4	chr2	68397735	68404006	(173789523)	C	L1PA7	LINE/L1	(5)	6149	8	2015566
1563	15.2	0.3	5.7	chr2	68419984	68420298	(173773231)	+	MER33	DNA/hAT-Charlie	20	317	(7)	2015584
358	34.2	14.0	1.5	chr2	68438844	68439208	(173754321)	C	L2a	LINE/L2	(313)	3113	2701	2015613
212	32.0	1.3	0.0	chr2	68558545	68558619	(173634910)	C	L2a	LINE/L2	(1)	3425	3350	2015776
1890	10.3	0.0	2.4	chr2	68558625	68558911	(173634618)	C	L1PA11	LINE/L1	(0)	6174	5895	2015777
16	0.0	0.0	0.0	chr2	69644166	69644182	(172549347)	+	(C)n	Simple_repeat	1	17	(0)	2017442
240	33.3	3.8	0.0	chr2	69978434	69978535	(172214994)	+	MIRb	SINE/MIR	113	218	(50)	2018098
319	27.7	7.8	0.0	chr2	69978774	69978892	(172214637)	C	MIR3	SINE/MIR	(37)	171	43	2018099
1837	25.5	10.7	6.3	chr2	70078170	70079268	(172114261)	C	L2a	LINE/L2	(8)	3418	2303	2018329
203	26.5	5.6	1.4	chr2	72757097	72757165	(169436364)	+	MIR	SINE/MIR	186	257	(5)	2022506
704	27.4	5.8	10.3	chr2	72757258	72757724	(169435805)	+	MER65D	LTR/ERV1	1	473	(0)	2022507
230	23.4	9.9	0.0	chr2	72915042	72915105	(169278424)	+	MIR	SINE/MIR	85	155	(107)	2022807
2228	12.2	0.0	0.0	chr2	74150213	74150515	(168043014)	+	AluSx	SINE/Alu	1	303	(9)	2024877
328	34.7	14.8	1.6	chr2	74150694	74150886	(168042643)	+	L2c	LINE/L2	3104	3326	(61)	2024878
846	15.9	2.3	7.1	chr2	74199378	74199580	(167993949)	+	L1MB3	LINE/L1	5950	6143	(40)	2024987
13	29.1	3.1	1.5	chr2	74553991	74554054	(167639475)	+	(TCTCCCT)n	Simple_repeat	1	66	(0)	2025553
16	14.5	5.3	0.0	chr2	74554224	74554261	(167639268)	+	(GCG)n	Simple_repeat	1	40	(0)	2025554
286	29.0	7.6	8.8	chr2	84907528	84907690	(157285839)	C	L2c	LINE/L2	(17)	3370	3182	2039636
2760	15.8	0.9	0.0	chr2	85497535	85497982	(156695547)	+	MER57A-int	LTR/ERV1	5344	5795	(392)	2040905
572	20.1	12.6	7.1	chr2	85497983	85498207	(156695322)	+	LTR54	LTR/ERV1	1	239	(271)	2040906
695	23.2	2.9	1.2	chr2	85498208	85498377	(156695152)	+	MER57A-int	LTR/ERV1	6015	6187	(0)	2040905
1612	10.5	11.8	0.4	chr2	85546187	85546425	(156647104)	+	AluY	SINE/Alu	21	290	(21)	2041002
1894	22.1	3.6	5.2	chr2	86193864	86194378	(155999151)	+	MLT1E1A	LTR/ERVL-MaLR	175	680	(0)	2042217
249	26.2	15.1	3.6	chr2	88015989	88016099	(154177430)	+	AluJb	SINE/Alu	118	243	(59)	2045130
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
313	30.2	2.0	3.7	chr2	88026096	88026229	(154167300)	C	MIR3	SINE/MIR	(104)	164	17	2045152
3889	8.7	4.5	0.6	chr2	88026385	88026916	(154166613)	+	MER41A	LTR/ERV1	1	554	(0)	2045153
2167	11.0	0.0	0.0	chr2	96224597	96224895	(145968634)	+	AluSc8	SINE/Alu	3	301	(10)	2051777
559	20.6	11.5	6.4	chr2	96224896	96225041	(145968488)	C	Charlie2b	DNA/hAT-Charlie	(596)	2186	2029	2051770
854	28.0	9.3	1.1	chr2	96225095	96225361	(145968168)	+	MLT2E	LTR/ERVL	3	293	(335)	2051778
2918	14.4	1.1	1.1	chr2	96918679	96919141	(145274388)	+	LTR2	LTR/ERV1	1	463	(0)	2053007
4327	10.9	3.5	1.0	chr2	96921850	96922343	(145271186)	+	MER41B	LTR/ERV1	1	509	(125)	2053011
616	15.3	8.3	0.0	chr2	97664455	97664565	(144528964)	C	FLAM_A	SINE/Alu	(10)	132	12	2053940
1147	7.7	0.0	0.0	chr2	97664589	97664731	(144528798)	C	U4	snRNA	(2)	143	1	2053941
16	16.6	0.0	0.0	chr2	99336696	99336722	(142856807)	+	(T)n	Simple_repeat	1	27	(0)	2056309
328	23.8	0.9	0.9	chr2	99336753	99336858	(142856671)	C	L1ME3	LINE/L1	(50)	6112	6007	2056310
4058	13.9	1.3	0.3	chr2	103469416	103470043	(138723486)	C	MER41B	LTR/ERV1	(0)	634	1	2062368
4355	10.1	2.3	0.6	chr2	103470044	103470672	(138722857)	C	MER41-int	LTR/ERV1	(2)	5944	5305	2062368
847	28.7	11.7	2.3	chr2	105467480	105467825	(136725704)	C	L2	LINE/L2	(1259)	2160	1788	2064996
4790	8.9	0.5	0.8	chr2	105467826	105468461	(136725068)	+	MER41B	LTR/ERV1	1	634	(0)	2064997
8363	5.7	19.0	0.1	chr2	107746624	107747902	(134445627)	C	LTR12C	LTR/ERV1	(0)	1579	2	2068294
3913	15.2	3.5	7.3	chr2	111433554	111434291	(130759238)	C	LTR62	LTR/ERVL	(0)	709	1	2073526
416	22.8	4.2	0.9	chr2	111699086	111699200	(130494329)	C	L1ME4a	LINE/L1	(205)	5919	5801	2073889
36	0.0	0.0	0.0	chr2	111699386	111699416	(130494113)	+	(AC)n	Simple_repeat	1	31	(0)	2073890
2525	15.0	6.9	0.0	chr2	119338578	119338998	(122854531)	C	LTR47A	LTR/ERVL	(0)	452	1	2085158
610	20.0	1.7	0.0	chr2	119339002	119339116	(122854413)	+	L1MC4	LINE/L1	7926	8042	(0)	2085145
2763	4.4	0.0	0.0	chr2	121531314	121531609	(120661920)	+	AluYe5	SINE/Alu	1	296	(14)	2088813
9149	6.6	14.1	0.1	chr2	124986592	124987948	(117205581)	C	LTR12C	LTR/ERV1	(0)	1579	2	2094026
7416	13.3	7.0	5.5	chr2	124987949	124988590	(117204939)	+	MER41-int	LTR/ERV1	1976	2646	(3617)	2094024
18658	11.9	1.8	1.5	chr2	124991429	124993960	(117199569)	+	MER41-int	LTR/ERV1	3404	5946	(0)	2094032
4002	12.9	1.7	2.2	chr2	124993962	124994596	(117198933)	+	MER41B	LTR/ERV1	3	634	(0)	2094032
44431	7.2	1.6	0.1	chr2	126646416	126651983	(115541546)	C	HERVL-int	LTR/ERVL	(0)	5654	1	2096188
1962	17.6	11.6	3.0	chr2	127927405	127927682	(114265847)	C	LTR54	LTR/ERV1	(175)	335	2	2098288
989	23.4	3.5	1.0	chr2	127927683	127927984	(114265545)	+	L1MB4	LINE/L1	2303	2612	(4905)	2098290
3988	7.2	2.7	0.0	chr2	128443279	128443816	(113749713)	C	MER41A	LTR/ERV1	(0)	554	2	2099214
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
6443	11.2	2.6	2.0	chr2	142695091	142696086	(99497443)	C	LTR5B	LTR/ERVK	(0)	1002	1	2119127
6309	13.0	8.1	2.8	chr2	142696087	142697500	(99496029)	+	L1PBa	LINE/L1	1881	3385	(3530)	2119125
218	35.3	9.2	3.8	chr2	144215776	144216040	(97977489)	+	L2b	LINE/L2	2701	2981	(438)	2121101
467	27.5	7.4	0.0	chr2	144659489	144659626	(97533903)	C	MIR	SINE/MIR	(89)	173	25	2121701
24	13.8	0.0	7.7	chr2	148644625	148644689	(93548840)	+	GA-rich	Low_complexity	1	65	(0)	2126931
12	9.7	0.0	0.0	chr2	148653685	148653706	(93539823)	+	(TTGC)n	Simple_repeat	1	22	(0)	2126948
2653	11.2	13.6	0.0	chr2	151380467	151380905	(90812624)	C	LTR54	LTR/ERV1	(0)	510	3	2130784
16160	7.1	2.4	0.1	chr2	151556840	151559953	(90633576)	+	L1PA7	LINE/L1	2962	6153	(1)	2131055
559	26.1	10.3	9.1	chr2	151760543	151760782	(90432747)	C	MamRep4096	DNA/hAT-Tip100	(14)	412	157	2131307
13	8.5	4.0	0.0	chr2	152042680	152042704	(90150825)	+	(TTTAT)n	Simple_repeat	1	26	(0)	2131748
4398	11.3	0.9	0.5	chr2	152042715	152043343	(90150186)	+	MER41B	LTR/ERV1	3	634	(0)	2131749
2313	9.2	1.3	0.3	chr2	155231099	155231402	(86962127)	+	AluY	SINE/Alu	3	309	(2)	2135950
16	19.9	0.0	0.0	chr2	155231404	155231438	(86962091)	+	GA-rich	Low_complexity	1	35	(0)	2135951
2176	11.6	0.0	0.7	chr2	155231445	155231738	(86961791)	+	AluSx	SINE/Alu	1	292	(20)	2135952
657	1.4	0.0	0.0	chr2	156401147	156401217	(85792312)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	2137396
18380	11.6	1.9	5.7	chr2	157929591	157930549	(84262980)	C	Tigger4	DNA/TcMar-Tigger	(1856)	875	1	2139462
2395	21.0	9.3	2.5	chr2	159134926	159135548	(83057981)	C	L1MB8	LINE/L1	(0)	6178	5514	2141173
1707	16.3	2.6	4.7	chr2	159152465	159152783	(83040746)	C	AluJr	SINE/Alu	(0)	312	1	2141190
946	29.9	11.2	3.2	chr2	167941421	167941886	(74251643)	C	L2a	LINE/L2	(0)	3426	2919	2152850
656	17.7	0.0	0.0	chr2	167944857	167944959	(74248570)	+	MER72	LTR/ERV1	5	107	(615)	2152855
3808	14.6	0.6	2.3	chr2	167944960	167945604	(74247925)	+	MER41B	LTR/ERV1	1	634	(0)	2152856
13	28.1	0.0	0.0	chr2	168455786	168455829	(73737700)	+	(CCTTCCC)n	Simple_repeat	1	44	(0)	2153582
1782	16.7	25.9	3.6	chr2	169711625	169712096	(72481433)	C	LTR18B	LTR/ERVL	(0)	614	1	2155456
20	24.4	1.4	6.0	chr2	169734378	169734473	(72459056)	+	G-rich	Low_complexity	1	91	(0)	2155496
13	15.0	3.3	0.0	chr2	169828217	169828248	(72365281)	+	G-rich	Low_complexity	1	33	(0)	2155683
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
1261	27.1	10.0	4.8	chr2	170264251	170264553	(71928976)	C	MLT1H1	LTR/ERVL-MaLR	(211)	344	3	2156369
1686	17.8	4.9	7.2	chr2	171798840	171799257	(70394272)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2159036
14	26.1	2.9	4.2	chr2	172084655	172084723	(70108806)	+	GA-rich	Low_complexity	1	71	(0)	2159581
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
286	21.7	6.7	4.6	chr2	174487547	174487633	(67705896)	+	MIR	SINE/MIR	5	93	(169)	2163350
226	36.9	2.3	4.4	chr2	176491712	176491847	(65701682)	+	MIR1_Amn	SINE/MIR	38	170	(60)	2166217
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
4076	10.5	6.3	0.2	chr2	181430258	181430850	(60762679)	C	MER41B	LTR/ERV1	(2)	632	1	2172723
428	31.4	8.4	9.5	chr2	181430851	181431060	(60762469)	C	MLT1J	LTR/ERVL-MaLR	(310)	202	1	2172722
4293	6.8	1.6	0.0	chr2	191599641	191600185	(50593344)	+	MER41A	LTR/ERV1	1	554	(0)	2186120
4057	10.4	1.7	8.0	chr2	195368772	195369448	(46824081)	C	MER41B	LTR/ERV1	(0)	634	1	2190796
4841	2.5	0.2	0.2	chr2	201126038	201126595	(41066934)	C	LTR6B	LTR/ERV1	(0)	558	1	2199587
4325	12.6	2.8	1.0	chr2	204354054	204354744	(37838785)	C	LTR62	LTR/ERVL	(5)	704	1	2205503
191	22.8	1.7	3.4	chr2	207772208	207772266	(34421263)	C	AmnSINE1	SINE/5S-Deu-L2	(215)	360	303	2210640
4667	8.7	0.3	2.9	chr2	207772280	207772811	(34420718)	+	MER41B	LTR/ERV1	1	523	(111)	2210641
1399	19.0	3.0	9.3	chr2	207798197	207798423	(34395106)	+	MER63B	DNA/hAT-Blackjack	106	339	(97)	2210720
4511	8.9	3.0	0.2	chr2	207798424	207799038	(34394491)	+	MER41B	LTR/ERV1	1	633	(1)	2210721
657	27.4	1.5	5.3	chr2	216578266	216578473	(25615056)	C	MLT1H	LTR/ERVL-MaLR	(258)	291	92	2223016
233	25.9	0.0	1.7	chr2	216578607	216578665	(25614864)	C	MIR3	SINE/MIR	(141)	67	10	2223017
2103	11.9	6.2	0.0	chr2	230654434	230654769	(11538760)	C	MER51B	LTR/ERV1	(19)	358	1	2245452
4276	6.1	2.5	0.9	chr2	230654862	230655291	(11538238)	+	MER41A	LTR/ERV1	1	436	(118)	2245453
946	23.0	5.1	1.4	chr2	236073295	236073401	(6120128)	C	MER33	DNA/hAT-Charlie	(186)	138	29	2254466
3372	13.9	2.0	4.7	chr20	1214382	1214954	(63229213)	C	MER41D	LTR/ERV1	(0)	557	1	2264636
2319	22.1	10.5	1.6	chr20	1214955	1215011	(63229156)	C	Arthur1	DNA/hAT-Tip100	(766)	3181	3128	2264635
3115	25.4	6.1	1.6	chr20	1215008	1215872	(63228295)	C	Arthur1	DNA/hAT-Tip100	(3037)	910	5	2264637
21	22.0	5.6	5.3	chr20	1391731	1391838	(63052329)	+	GA-rich	Low_complexity	1	114	(0)	2264921
3636	14.1	2.2	7.4	chr20	7893183	7893912	(56550255)	+	LTR8	LTR/ERV1	1	691	(0)	2276479
150	8.0	2.3	0.0	chr20	8018261	8018528	(56425639)	+	(GA)n	Simple_repeat	1	274	(0)	2276652
1808	10.6	2.5	0.7	chr20	9025818	9026094	(55418073)	+	LTR8	LTR/ERV1	1	282	(409)	2278256
3857	8.5	3.8	1.3	chr20	21656353	21656887	(42787280)	+	PRIMA41-int	LTR/ERV1	7208	7756	(0)	2297426
4316	7.9	0.2	0.0	chr20	21656888	21657407	(42786760)	+	MER41C	LTR/ERV1	1	521	(0)	2297426
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
235	36.1	6.6	0.0	chr20	31662140	31662294	(32781873)	+	L2b	LINE/L2	2725	2890	(529)	2306561
254	33.3	2.0	9.1	chr20	31662396	31662560	(32781607)	+	L2b	LINE/L2	3041	3193	(182)	2306561
14	11.6	3.6	0.0	chr20	31675922	31675949	(32768218)	+	(CCT)n	Simple_repeat	1	29	(0)	2306601
192	27.6	0.0	4.9	chr20	31678995	31679055	(32765112)	C	MIR3	SINE/MIR	(134)	74	17	2306608
220	31.9	6.9	4.1	chr20	31706472	31706569	(32737598)	C	L2c	LINE/L2	(1)	3386	3286	2306681
371	27.2	8.1	3.4	chr20	31706571	31706688	(32737479)	C	MIRb	SINE/MIR	(70)	198	75	2306680
188	10.3	0.0	0.0	chr20	31706703	31706731	(32737436)	+	L2c	LINE/L2	3359	3387	(0)	2306682
447	26.6	8.1	2.3	chr20	31706791	31706977	(32737190)	C	MIRc	SINE/MIR	(32)	236	28	2306683
489	32.9	10.1	2.7	chr20	31710971	31711189	(32732978)	+	MIRb	SINE/MIR	32	268	(0)	2306693
12	18.1	3.1	0.0	chr20	31836254	31836285	(32607882)	+	(CCTG)n	Simple_repeat	1	33	(0)	2306987
323	18.8	13.5	0.0	chr20	31836448	31836543	(32607624)	C	MIR3	SINE/MIR	(72)	136	26	2306988
199	27.9	4.8	9.2	chr20	31836542	31836628	(32607539)	+	MIRc	SINE/MIR	121	203	(65)	2306989
349	20.0	2.8	0.0	chr20	31836651	31836720	(32607447)	C	MIR3	SINE/MIR	(62)	146	75	2306990
12	23.9	0.0	2.4	chr20	32583266	32583306	(31860861)	+	(CCCGCCT)n	Simple_repeat	1	41	(0)	2308733
1838	13.9	2.7	0.3	chr20	33418831	33419118	(31025049)	+	AluSz	SINE/Alu	1	295	(17)	2310665
1686	11.7	5.9	1.1	chr20	34322621	34322896	(30121271)	+	MER57B1	LTR/ERV1	3	292	(109)	2312779
3835	11.2	4.0	1.2	chr20	34322917	34323398	(30120769)	+	MER41B	LTR/ERV1	13	508	(126)	2312780
24	9.5	4.4	0.0	chr20	34825668	34825712	(29618455)	+	(GGGA)n	Simple_repeat	1	47	(0)	2313908
875	25.2	6.1	4.0	chr20	35227353	35227625	(29216542)	+	L3	LINE/CR1	3712	3990	(109)	2314818
2161	17.8	9.2	3.3	chr20	36083085	36083264	(28360903)	+	MLT2B1	LTR/ERVL	268	490	(30)	2316807
3733	7.5	0.9	10.3	chr20	36083265	36083722	(28360445)	+	MER41A	LTR/ERV1	1	463	(91)	2316809
2151	14.1	2.8	3.0	chr20	37542174	37542568	(26901599)	C	LTR47A2	LTR/ERVL	(38)	394	1	2320221
1259	16.9	8.3	10.4	chr20	37542579	37542703	(26901464)	+	L1ME2z	LINE/L1	6071	6200	(244)	2320220
2230	11.0	0.0	0.0	chr20	37542704	37542993	(26901174)	+	AluSz	SINE/Alu	1	290	(22)	2320222
489	21.4	11.5	3.7	chr20	38854579	38854714	(25589453)	+	MIRb	SINE/MIR	15	162	(106)	2323017
4293	12.9	0.3	0.5	chr20	40948257	40948880	(23495287)	C	MER41B	LTR/ERV1	(9)	625	3	2326752
1312	25.4	9.6	2.0	chr20	43950457	43950909	(20493258)	+	L2a	LINE/L2	2924	3414	(12)	2332327
240	27.0	3.8	12.5	chr20	45935742	45935885	(18508282)	+	MER5A	DNA/hAT-Charlie	59	189	(0)	2336594
2846	12.2	1.4	0.2	chr20	46722231	46722657	(17721510)	C	LTR47A2	LTR/ERVL	(0)	432	1	2338314
615	27.1	0.0	3.8	chr20	46722658	46722740	(17721427)	+	MIRb	SINE/MIR	178	260	(8)	2338313
418	26.0	7.3	0.0	chr20	46722783	46722909	(17721258)	+	MER102c	DNA/hAT-Charlie	170	306	(25)	2338315
2331	10.4	0.0	1.9	chr20	47199725	47199925	(17244242)	C	AluSx1	SINE/Alu	(0)	312	112	2339468
4383	5.2	0.9	1.2	chr20	47199926	47200485	(17243682)	+	LTR6B	LTR/ERV1	1	558	(0)	2339469
4551	11.9	0.6	0.3	chr20	48139141	48139772	(16304395)	C	MER41B	LTR/ERV1	(0)	634	1	2341528
224	38.8	8.8	3.9	chr20	48139773	48139983	(16304184)	C	L2c	LINE/L2	(146)	3241	3020	2341527
397	29.9	4.5	9.3	chr20	49982121	49982378	(14461789)	+	L2b	LINE/L2	3130	3374	(1)	2345773
2301	14.3	9.6	5.9	chr20	50508654	50509117	(13935050)	C	LTR54	LTR/ERV1	(0)	510	29	2347138
2101	9.3	2.7	3.3	chr20	50509118	50509417	(13934750)	C	AluSq	SINE/Alu	(15)	298	1	2347139
2291	10.8	0.0	0.0	chr20	50818901	50819207	(13624960)	+	AluSx1	SINE/Alu	1	307	(5)	2347821
4331	10.9	0.6	6.2	chr20	51338509	51339180	(13104987)	C	MER41B	LTR/ERV1	(0)	634	1	2348941
646	26.2	15.5	0.0	chr20	51339197	51339398	(13104769)	C	MIR	SINE/MIR	(11)	251	13	2348942
2128	9.3	0.7	0.4	chr20	53175162	53175440	(11268727)	C	AluSq2	SINE/Alu	(33)	280	1	2352942
254	27.9	12.4	8.4	chr20	53606308	53606522	(10837645)	C	MIRb	SINE/MIR	(15)	253	29	2353845
225	31.9	5.3	2.7	chr20	53606717	53606864	(10837303)	+	MIR	SINE/MIR	10	161	(101)	2353846
628	28.1	9.6	3.5	chr20	53677613	53677926	(10766241)	+	MER102b	DNA/hAT-Charlie	2	336	(5)	2354045
38	27.0	1.1	0.0	chr20	53915271	53915364	(10528803)	+	GA-rich	Low_complexity	1	95	(0)	2354661
15	8.5	0.0	0.0	chr20	53915453	53915477	(10528690)	+	(TTAT)n	Simple_repeat	1	25	(0)	2354662
11	36.0	1.1	3.4	chr20	57390012	57390098	(7054069)	+	G-rich	Low_complexity	1	88	(0)	2361090
645	21.5	2.0	2.0	chr20	57390428	57390579	(7053588)	+	MER45A	DNA/hAT-Tip100	27	178	(0)	2361091
188	32.4	7.5	1.8	chr20	57391043	57391155	(7053012)	+	L2a	LINE/L2	3266	3385	(41)	2361092
12	17.2	4.9	2.3	chr20	57391207	57391247	(7052920)	+	(TCCGCCC)n	Simple_repeat	1	43	(0)	2361093
341	28.9	4.5	0.8	chr20	58252144	58252272	(6191895)	C	MIR	SINE/MIR	(58)	204	71	2362642
2254	14.2	7.8	1.5	chr20	58256752	58257150	(6187017)	+	MSTA	LTR/ERVL-MaLR	3	428	(0)	2362650
3346	23.6	8.8	3.2	chr20	58257151	58257250	(6186917)	+	L1M4a1	LINE/L1	2103	2203	(376)	2362649
2305	10.4	0.0	1.0	chr20	59012000	59012308	(5431859)	C	AluSq2	SINE/Alu	(7)	306	1	2363807
4360	11.5	1.3	2.2	chr20	59012309	59012469	(5431698)	C	MER41B	LTR/ERV1	(478)	156	1	2363806
400	14.5	2.8	0.0	chr20	59020965	59021033	(5423134)	C	L1M3	LINE/L1	(415)	5768	5698	2363819
2290	25.6	11.6	1.9	chr20	62601792	62602798	(1841369)	C	L1MEf	LINE/L1	(4767)	1433	316	2368747
2275	9.4	1.0	0.0	chr20	62794891	62795188	(1648979)	+	AluSx1	SINE/Alu	1	301	(11)	2368960
724	24.8	9.3	3.5	chr20	62795189	62795343	(1648824)	C	L1MB7	LINE/L1	(155)	6029	5874	2368959
13	18.4	0.0	0.0	chr20	62822810	62822840	(1621327)	+	(CCTCCC)n	Simple_repeat	1	31	(0)	2368985
81	21.6	1.4	3.2	chr20	63653429	63653646	(790521)	+	G-rich	Low_complexity	1	221	(0)	2369848
15	4.1	0.0	6.9	chr20	64063098	64063126	(381041)	+	(GCGG)n	Simple_repeat	1	29	(0)	2370474
4012	14.0	2.7	1.8	chr21	17690240	17690866	(29019117)	+	MER41B	LTR/ERV1	1	633	(1)	2382065
3422	14.5	0.8	7.1	chr21	28791771	28792430	(17917553)	+	MER41B	LTR/ERV1	17	634	(0)	2397267
211	27.4	1.6	0.0	chr21	29074154	29074215	(17635768)	C	MIRb	SINE/MIR	(19)	249	187	2397697
491	29.2	2.2	1.4	chr21	29074299	29074461	(17635522)	C	MIR	SINE/MIR	(39)	169	3	2397697
2458	10.3	3.3	0.8	chr21	29641176	29641528	(17068455)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2398629
540	25.6	6.6	7.5	chr21	29641529	29641590	(17068393)	C	MIR	SINE/MIR	(168)	94	42	2398628
402	28.5	8.9	0.0	chr21	29641594	29641716	(17068267)	+	MER96	DNA/hAT-Tip100	5	139	(36)	2398630
180	37.5	0.0	2.7	chr21	29656498	29656571	(17053412)	+	MER5A	DNA/hAT-Charlie	69	140	(49)	2398648
291	37.5	3.8	4.1	chr21	29656797	29657103	(17052880)	+	X6B_LINE	LINE/CR1	759	1065	(7)	2398649
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
3418	16.0	5.5	1.2	chr21	33234740	33235350	(13474633)	C	MER41B	LTR/ERV1	(38)	596	1	2404561
1097	18.6	13.1	2.1	chr21	33235480	33235644	(13474339)	C	MER45B	DNA/hAT-Tip100	(2)	1038	850	2404562
705	14.4	30.0	0.0	chr21	33300620	33300799	(13409184)	+	MLT1A0	LTR/ERVL-MaLR	1	257	(108)	2404689
681	8.1	0.0	0.0	chr21	33300804	33300889	(13409094)	+	MER41B	LTR/ERV1	3	88	(546)	2404690
287	19.7	0.0	2.9	chr21	33300891	33300958	(13409025)	+	MLT1A0	LTR/ERVL-MaLR	402	467	(0)	2404689
473	31.4	5.1	2.1	chr21	33324027	33324051	(13385932)	+	(ATAT)n	Simple_repeat	4	30	(0)	2404727
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
323	18.5	5.2	3.2	chr21	33977150	33977244	(12732739)	C	MIRc	SINE/MIR	(135)	133	37	2405922
205	32.0	6.7	3.0	chr21	35100389	35100488	(11609495)	C	L3b	LINE/CR1	(621)	4611	4508	2407611
13	12.2	3.7	0.0	chr21	36079344	36079370	(10630613)	+	(CAG)n	Simple_repeat	1	28	(0)	2409098
20	15.6	1.5	7.5	chr21	37366467	37366532	(9343451)	+	(CCTCC)n	Simple_repeat	1	67	(0)	2411468
231	24.0	9.6	0.0	chr21	39317464	39317538	(7392445)	C	MIR	SINE/MIR	(136)	126	44	2414340
8432	7.5	2.5	0.0	chr21	39358522	39359592	(7350391)	+	PRIMA41-int	LTR/ERV1	6659	7756	(0)	2414432
2415	9.8	1.1	5.7	chr21	39359593	39359961	(7350022)	+	MER41C	LTR/ERV1	1	352	(169)	2414432
180	22.4	16.9	0.0	chr21	39387889	39387937	(7322046)	C	MIRb	SINE/MIR	(28)	240	182	2414499
1134	19.9	4.0	7.1	chr21	39430576	39430915	(7279068)	+	LTR56	LTR/ERV1	1	329	(116)	2414589
3871	10.8	4.0	10.2	chr21	42971099	42971776	(3738207)	+	MER41B	LTR/ERV1	1	634	(0)	2419659
4076	7.6	2.2	0.7	chr21	43859631	43860176	(2849807)	C	MER41A	LTR/ERV1	(0)	554	1	2420939
280	20.9	1.5	0.0	chr21	44299424	44299490	(2410493)	C	L1ME3A	LINE/L1	(29)	6144	6077	2421589
18	13.6	4.9	0.0	chr21	44299576	44299616	(2410367)	+	G-rich	Low_complexity	1	43	(0)	2421590
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
21	16.0	4.1	0.0	chr22	16601252	16601300	(34217168)	+	(CCGGAG)n	Simple_repeat	1	51	(0)	2427582
876	25.5	19.5	2.6	chr22	19419272	19419722	(31398746)	+	L2a	LINE/L2	2871	3415	(11)	2431969
2435	8.3	0.0	0.3	chr22	19421016	19421316	(31397152)	+	AluSq2	SINE/Alu	1	300	(13)	2431975
2407	6.2	0.7	0.0	chr22	19432933	19433224	(31385244)	C	AluSg7	SINE/Alu	(15)	294	1	2431998
1781	26.9	13.3	10.2	chr22	19814394	19814789	(31003679)	+	L1MD3	LINE/L1	7229	7677	(318)	2432559
1722	17.5	0.0	1.1	chr22	19814790	19815057	(31003411)	+	AluJo	SINE/Alu	40	304	(8)	2432563
10894	6.1	1.4	0.6	chr22	19938864	19939961	(30878507)	+	HERVK11-int	LTR/ERVK	5331	6441	(1512)	2432709
2541	7.0	0.0	1.9	chr22	19939962	19940277	(30878191)	+	AluY	SINE/Alu	1	310	(1)	2432711
10894	6.1	1.4	0.6	chr22	19940278	19940687	(30877781)	+	HERVK11-int	LTR/ERVK	6442	6851	(1102)	2432709
16	16.2	2.3	2.3	chr22	19941706	19941753	(30876715)	+	(GCGCCGC)n	Simple_repeat	1	48	(0)	2432712
2071	18.5	6.7	2.8	chr22	19942683	19943183	(30875285)	C	MER67A	LTR/ERV1	(21)	522	1	2432714
2177	13.0	0.0	0.3	chr22	19946207	19946506	(30871962)	+	AluSx1	SINE/Alu	3	301	(11)	2432721
5667	19.4	3.6	8.0	chr22	19946507	19946899	(30871569)	C	MER31-int	LTR/ERV1	(1606)	3330	2952	2432716
7558	8.4	2.6	0.5	chr22	19947258	19948243	(30870225)	C	LTR13	LTR/ERVK	(0)	1007	1	2432723
5667	19.4	3.6	8.0	chr22	19948244	19948370	(30870098)	C	MER31-int	LTR/ERV1	(2013)	2923	2792	2432716
312	30.1	6.7	3.2	chr22	20017199	20017356	(30801112)	C	MIRb	SINE/MIR	(17)	251	88	2432796
17	21.9	4.5	5.4	chr22	20021145	20021232	(30797236)	+	(GGCTCCG)n	Simple_repeat	1	92	(0)	2432801
1918	20.9	4.6	5.6	chr22	20059275	20059960	(30758508)	C	L1MB8	LINE/L1	(418)	5766	4993	2432853
359	27.9	1.3	8.3	chr22	20071340	20071472	(30746996)	C	L1MC4a	LINE/L1	(32)	7850	7727	2432873
2634	14.1	4.5	3.8	chr22	20071474	20071953	(30746515)	C	MER31A	LTR/ERV1	(0)	485	2	2432876
12	19.3	4.7	2.2	chr22	20247180	20247222	(30571246)	+	G-rich	Low_complexity	1	45	(0)	2433042
14	16.4	2.9	0.0	chr22	20320135	20320168	(30498300)	+	(CCGCC)n	Simple_repeat	1	35	(0)	2433108
290	35.0	7.2	2.7	chr22	20456204	20456388	(30362080)	+	L2a	LINE/L2	3228	3421	(5)	2433339
1943	13.2	1.4	0.0	chr22	20494388	20494676	(30323792)	C	AluSx	SINE/Alu	(19)	293	1	2433425
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
232	17.4	0.0	8.0	chr22	20546084	20546133	(30272335)	C	L1MC5a	LINE/L1	(345)	2432	2387	2433532
4081	18.4	3.8	12.4	chr22	20656630	20658936	(30159532)	C	REP522	Satellite/telo	(147)	2107	1	2433709
13	8.1	3.6	3.5	chr22	20702840	20702867	(30115601)	+	(GCA)n	Simple_repeat	1	29	(0)	2433782
458	20.6	0.0	7.0	chr22	20768066	20768180	(30050288)	C	SVA_F	Retroposon/SVA	(838)	537	431	2433886
814	18.1	0.0	0.8	chr22	20768238	20768371	(30050097)	C	AluJb	SINE/Alu	(179)	133	1	2433883
405	26.2	14.9	2.3	chr22	20768421	20768596	(30049872)	+	L1ME4a	LINE/L1	5876	6077	(47)	2433887
257	23.1	1.3	8.2	chr22	20777757	20777841	(30040627)	+	Tigger15a	DNA/TcMar-Tigger	39	117	(598)	2433915
295	22.1	8.1	11.7	chr22	20794994	20795039	(30023429)	+	L2a	LINE/L2	3367	3412	(14)	2433947
2636	16.8	4.7	0.0	chr22	20795107	20795595	(30022873)	+	LTR10D	LTR/ERV1	1	513	(0)	2433949
1272	19.0	7.0	1.7	chr22	20814222	20814467	(30004001)	+	L1MB3	LINE/L1	5872	6138	(45)	2433976
1748	19.8	0.7	0.3	chr22	20814468	20814760	(30003708)	+	AluJo	SINE/Alu	1	294	(18)	2433977
1272	19.0	7.0	1.7	chr22	20814761	20814808	(30003660)	+	L1MB3	LINE/L1	6139	6183	(0)	2433976
966	14.4	0.0	0.0	chr22	20886155	20886286	(29932182)	C	FLAM_C	SINE/Alu	(10)	133	2	2434133
2271	10.7	1.3	1.0	chr22	20886299	20886608	(29931860)	C	AluSz	SINE/Alu	(1)	311	1	2434134
2173	12.7	1.3	2.5	chr22	20947640	20947983	(29870485)	C	AluJb	SINE/Alu	(0)	312	1	2434299
19	8.6	0.0	4.8	chr22	20947984	20947997	(29870471)	+	(TTTTC)n	Simple_repeat	3	14	(0)	2434300
1540	17.9	4.3	1.8	chr22	20954446	20954719	(29863749)	+	AluSg	SINE/Alu	1	281	(29)	2434310
2053	10.9	0.7	1.4	chr22	20954745	20955028	(29863440)	C	AluSx	SINE/Alu	(29)	283	2	2434311
2145	6.6	0.0	1.8	chr22	20955056	20955329	(29863139)	+	AluSg7	SINE/Alu	31	299	(10)	2434312
21	0.0	0.0	0.0	chr22	20955480	20955502	(29862966)	+	(AT)n	Simple_repeat	1	23	(0)	2434314
934	18.0	0.0	0.0	chr22	20955645	20955794	(29862674)	+	FAM	SINE/Alu	1	150	(35)	2434315
245	27.9	0.0	0.0	chr22	20981567	20981623	(29836845)	C	L2b	LINE/L2	(341)	3085	3026	2434356
1392	7.7	0.0	0.6	chr22	21002626	21002808	(29815660)	C	AluYh3	SINE/Alu	(0)	311	130	2434376
410	30.8	7.1	5.2	chr22	21014709	21014996	(29803472)	+	L2b	LINE/L2	3035	3328	(47)	2434397
1958	18.2	6.8	1.8	chr22	21037711	21038101	(29780367)	C	LTR24	LTR/ERV1	(33)	434	17	2434434
2040	13.7	0.3	0.0	chr22	21038102	21038393	(29780075)	+	AluJr	SINE/Alu	9	301	(11)	2434436
1057	17.7	1.2	0.0	chr22	21556249	21556412	(29262056)	+	FRAM	SINE/Alu	1	166	(10)	2435411
1661	14.9	0.0	9.5	chr22	21556426	21556761	(29261707)	C	AluJb	SINE/Alu	(8)	304	1	2435412
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
2251	8.9	0.0	0.3	chr22	21569113	21569415	(29249053)	+	AluSz	SINE/Alu	1	302	(10)	2435444
1689	14.0	2.5	0.0	chr22	21571431	21571701	(29246767)	C	AluSq2	SINE/Alu	(35)	278	1	2435448
1767	15.2	0.0	5.8	chr22	21588457	21588651	(29229817)	C	AluJb	SINE/Alu	(1)	311	130	2435486
2331	8.4	0.0	0.3	chr22	21588652	21588959	(29229509)	C	AluSg7	SINE/Alu	(0)	309	3	2435487
2212	9.3	0.0	2.6	chr22	21607225	21607537	(29210931)	+	AluSx1	SINE/Alu	1	305	(7)	2435525
1709	20.2	1.0	0.0	chr22	21840122	21840418	(28978050)	C	AluJb	SINE/Alu	(12)	300	1	2436018
2121	16.9	10.3	8.4	chr22	21840419	21840504	(28977964)	+	L1MB7	LINE/L1	6030	6111	(73)	2436015
1962	11.3	0.7	0.0	chr22	21840505	21840769	(28977699)	+	AluSc	SINE/Alu	40	306	(3)	2436019
2362	10.1	0.0	0.0	chr22	21908693	21909000	(28909468)	+	AluSq	SINE/Alu	6	313	(0)	2436198
5505	8.2	1.8	2.5	chr22	21909001	21909080	(28909388)	+	MER4E1	LTR/ERV1	275	346	(435)	2436197
2383	9.6	0.0	0.6	chr22	21909081	21909394	(28909074)	+	AluSq10	SINE/Alu	2	313	(0)	2436199
345	29.2	6.1	0.7	chr22	21972203	21972357	(28846111)	+	L1ME4a	LINE/L1	5961	6124	(0)	2436291
337	38.5	8.0	1.5	chr22	21976808	21977005	(28841463)	+	L1M5	LINE/L1	4840	5051	(1095)	2436299
947	19.1	2.2	4.8	chr22	21977030	21977217	(28841251)	+	FAM	SINE/Alu	1	183	(2)	2436300
976	26.6	12.8	5.8	chr22	22062336	22063164	(28755304)	+	L1M4	LINE/L1	799	1694	(5823)	2436429
3572	12.2	3.4	1.6	chr22	22109629	22110335	(28708133)	C	LTR60	LTR/ERV1	(10)	755	3	2436489
817	17.8	1.1	2.7	chr22	22461104	22461288	(28357180)	C	MER51-int	LTR/ERV1	(3681)	4135	3954	2436872
357	20.0	7.4	0.0	chr22	22461314	22461388	(28357080)	C	HUERS-P3-int	LTR/ERV1	(484)	6934	6854	2436873
1671	22.9	0.0	0.3	chr22	22461408	22461727	(28356741)	C	HUERS-P3-int	LTR/ERV1	(2007)	6912	6594	2436873
3765	20.1	2.9	2.0	chr22	22463622	22464929	(28353539)	C	HUERS-P3-int	LTR/ERV1	(7513)	1406	1	2436873
711	19.7	0.8	0.0	chr22	22648948	22649064	(28169404)	C	AluJr	SINE/Alu	(194)	118	1	2437222
194	28.7	9.0	1.0	chr22	22649101	22649202	(28169266)	C	MIRc	SINE/MIR	(119)	149	39	2437223
6768	11.6	0.6	1.0	chr22	22649348	22650319	(28168149)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2437224
39	11.2	4.3	0.0	chr22	22763861	22763930	(28054538)	+	(AAT)n	Simple_repeat	1	73	(0)	2437353
3581	13.4	3.1	3.0	chr22	29152776	29153407	(21665061)	C	MER41B	LTR/ERV1	(38)	596	1	2449979
1353	20.8	0.0	4.0	chr22	29153408	29153657	(21664811)	C	AluJb	SINE/Alu	(71)	241	2	2449978
17	20.2	4.8	4.6	chr22	31346017	31346078	(19472390)	+	(CG)n	Simple_repeat	1	65	(0)	2454547
12	18.3	0.0	3.0	chr22	35840509	35840541	(14977927)	+	(CCCCTC)n	Simple_repeat	1	33	(0)	2463826
38	5.0	0.0	0.0	chr22	35840616	35840657	(14977811)	+	(GT)n	Simple_repeat	1	42	(0)	2463827
65	24.6	3.5	2.9	chr22	37212205	37212435	(13606033)	+	GA-rich	Low_complexity	1	239	(0)	2466724
12	9.7	0.0	0.0	chr22	37657993	37658014	(13160454)	+	(AACC)n	Simple_repeat	1	22	(0)	2467750
361	13.7	2.7	0.0	chr22	37658085	37658157	(13160311)	+	L1ME2	LINE/L1	6088	6162	(2)	2467751
205	29.7	4.6	1.0	chr22	38771851	38771950	(12046518)	+	L2b	LINE/L2	3276	3381	(6)	2470242
4440	6.9	0.4	0.4	chr22	38772018	38772568	(12045900)	+	MER41A	LTR/ERV1	1	551	(3)	2470243
19	24.6	6.8	1.1	chr22	38872227	38872314	(11946154)	+	(GCGCGC)n	Simple_repeat	1	94	(0)	2470438
2875	15.6	12.1	0.2	chr22	40814035	40814665	(10003803)	+	LTR62	LTR/ERVL	1	709	(0)	2474419
185	23.5	3.8	5.6	chr22	41021974	41022027	(9796441)	+	MamRTE1	LINE/RTE-BovB	778	830	(2982)	2474933
17	21.1	4.1	0.0	chr22	45671885	45671933	(5146535)	+	(CGG)n	Simple_repeat	1	51	(0)	2484357
33	19.3	0.0	3.7	chr22	45671955	45672036	(5146432)	+	(CCT)n	Simple_repeat	1	82	(0)	2484358
18	4.7	0.0	0.0	chr22	50261996	50262017	(556451)	+	(C)n	Simple_repeat	1	22	(0)	2490383
86	15.6	7.8	1.9	chr22	50307696	50307937	(510531)	+	G-rich	Low_complexity	1	261	(0)	2490424
11	21.2	0.0	2.9	chr3	4815087	4815121	(193480438)	+	(TCTTGT)n	Simple_repeat	1	35	(0)	2499625
380	25.4	5.1	0.8	chr3	4976236	4976366	(193319193)	+	MER91C	DNA/hAT-Tip100	1	137	(3)	2499889
392	26.2	7.6	4.3	chr3	4976371	4976538	(193319021)	+	MIRb	SINE/MIR	16	191	(17)	2499890
369	26.6	8.3	10.0	chr3	4996004	4996262	(193299297)	C	L2c	LINE/L2	(0)	3387	3134	2499924
1985	18.9	4.0	3.1	chr3	4996294	4996709	(193298850)	+	MLT1C	LTR/ERVL-MaLR	44	463	(4)	2499925
6735	7.8	4.4	1.0	chr3	5081627	5082560	(193212999)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2500157
1278	24.3	6.0	6.2	chr3	5121648	5121956	(193173603)	+	MER49	LTR/ERV1	607	923	(0)	2500262
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
218	29.4	12.5	2.5	chr3	8353422	8353543	(189942016)	C	MIR	SINE/MIR	(70)	192	57	2505209
702	23.5	3.6	0.0	chr3	8356004	8356165	(189939394)	+	MER58A	DNA/hAT-Charlie	1	168	(56)	2505217
2054	14.6	6.6	3.1	chr3	8356169	8356656	(189938903)	+	MLT2A2	LTR/ERVL	22	554	(0)	2505218
1806	23.1	6.9	8.1	chr3	8356901	8356980	(189938579)	+	MER41E	LTR/ERV1	1	57	(538)	2505220
2241	10.7	0.0	2.6	chr3	8356981	8357288	(189938271)	+	AluSx1	SINE/Alu	1	300	(12)	2505221
1806	23.1	6.9	8.1	chr3	8357289	8357810	(189937749)	+	MER41E	LTR/ERV1	58	595	(0)	2505220
1253	25.3	6.3	3.7	chr3	8358001	8358464	(189937095)	C	LTR16C	LTR/ERVL	(5)	484	8	2505222
272	31.4	0.0	9.7	chr3	8359005	8359117	(189936442)	C	L2c	LINE/L2	(0)	3387	3286	2505223
605	32.1	7.7	3.0	chr3	8359153	8359559	(189936000)	+	MLT1K	LTR/ERVL-MaLR	24	451	(144)	2505224
221	30.2	4.8	5.3	chr3	8362366	8362510	(189933049)	C	L2a	LINE/L2	(0)	3426	3260	2505229
577	24.2	13.2	3.1	chr3	8369742	8369937	(189925622)	+	MER58A	DNA/hAT-Charlie	1	219	(5)	2505239
7208	6.1	0.4	0.0	chr3	9643307	9644375	(188651184)	+	L1PA6	LINE/L1	5080	6151	(3)	2507655
439	15.7	2.8	0.0	chr3	9644392	9644461	(188651098)	C	LTR8	LTR/ERV1	(619)	72	1	2507633
880	16.7	2.7	0.0	chr3	9644468	9644647	(188650912)	+	L1ME1	LINE/L1	5254	5438	(735)	2507656
732	18.1	11.4	5.0	chr3	9979221	9979400	(188316159)	+	MER5C1	DNA/hAT-Charlie	71	263	(0)	2508394
18	3.3	6.5	0.0	chr3	10191879	10191909	(188103650)	+	(AATG)n	Simple_repeat	1	33	(0)	2508885
54	0.0	3.8	0.0	chr3	10192024	10192076	(188103483)	+	(GT)n	Simple_repeat	1	55	(0)	2508886
257	21.9	1.4	2.7	chr3	12664617	12664691	(185630868)	+	L1ME3G	LINE/L1	189	262	(662)	2513760
203	32.9	1.4	1.4	chr3	12960153	12960226	(185335333)	C	MIRb	SINE/MIR	(1)	267	194	2514369
295	33.6	5.7	5.0	chr3	12999058	12999241	(185296318)	+	MIR3	SINE/MIR	4	187	(21)	2514445
232	31.6	4.9	0.2	chr3	12999257	12999387	(185296172)	+	L3b	LINE/CR1	3897	3991	(108)	2514446
14	15.4	6.7	2.1	chr3	13650739	13650783	(184644776)	+	(GGCCA)n	Simple_repeat	1	48	(0)	2515682
343	20.9	10.8	3.4	chr3	13650819	13650937	(184644622)	+	Charlie4a	DNA/hAT-Charlie	25	153	(355)	2515683
508	30.4	1.8	0.6	chr3	13650942	13651110	(184644449)	+	Charlie4a	DNA/hAT-Charlie	216	386	(122)	2515684
328	30.9	4.7	0.0	chr3	14232962	14233084	(184062475)	+	L3	LINE/CR1	3898	4026	(73)	2516500
1959	14.1	0.3	0.7	chr3	14233100	14233383	(184062176)	+	AluSz6	SINE/Alu	1	283	(29)	2516501
3024	5.7	2.3	3.9	chr3	14272354	14272791	(184022768)	C	LTR7	LTR/ERV1	(19)	431	1	2516579
1332	16.9	0.4	4.8	chr3	14272796	14272844	(184022715)	C	AluJb	SINE/Alu	(75)	237	194	2516578
6412	12.1	1.4	1.3	chr3	14272845	14273811	(184021748)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	2516580
400	32.1	13.0	8.9	chr3	15305366	15305768	(182989791)	C	L2b	LINE/L2	(14)	3361	2940	2518532
2608	20.7	2.6	2.4	chr3	15381211	15381750	(182913809)	C	MER87	LTR/ERV1	(0)	541	1	2518719
486	22.5	15.1	7.1	chr3	15381751	15381771	(182913788)	C	MER58A	DNA/hAT-Charlie	(203)	21	1	2518718
468	25.3	2.5	3.1	chr3	15381773	15381935	(182913624)	C	L1ME4a	LINE/L1	(376)	5748	5587	2518716
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
33	9.0	5.0	0.0	chr3	20040837	20040896	(178254663)	+	(CCCGCCT)n	Simple_repeat	1	63	(0)	2525558
312	26.9	9.7	0.0	chr3	20323561	20323653	(177971906)	C	LTR46	LTR/ERV1	(357)	103	1	2526022
394	34.6	3.1	2.6	chr3	20323680	20323869	(177971690)	C	L2b	LINE/L2	(185)	3190	3000	2526021
12	15.8	0.0	3.3	chr3	21515480	21515509	(176780050)	+	A-rich	Low_complexity	1	30	(0)	2527479
274	13.2	0.0	0.0	chr3	21515521	21515558	(176780001)	+	MER34C_	LTR/ERV1	1	38	(547)	2527480
4644	13.8	7.3	0.0	chr3	21515562	21516308	(176779251)	+	LTR8B	LTR/ERV1	1	806	(14)	2527481
328	27.1	5.4	2.8	chr3	25789564	25789707	(172505852)	C	L1ME4a	LINE/L1	(272)	5852	5705	2533812
3807	19.1	5.4	3.0	chr3	32683975	32684843	(165610716)	+	L1MC3	LINE/L1	6893	7783	(2)	2544421
208	31.6	3.7	0.0	chr3	32684855	32684933	(165610626)	+	MIR	SINE/MIR	151	232	(30)	2544422
3381	9.0	2.5	1.3	chr3	32972751	32973224	(165322335)	+	LTR15	LTR/ERV1	3	482	(11)	2545047
17	5.0	0.0	0.0	chr3	33718540	33718560	(164576999)	+	(A)n	Simple_repeat	1	21	(0)	2546319
427	32.3	7.7	6.6	chr3	36958021	36958355	(161337204)	+	L2c	LINE/L2	3049	3387	(0)	2550713
4356	11.4	1.7	0.5	chr3	37823987	37824612	(160470947)	C	MER41B	LTR/ERV1	(0)	634	1	2552134
312	31.5	5.2	4.2	chr3	37824613	37824737	(160470822)	C	L1MEd	LINE/L1	(2902)	3417	3293	2552133
246	31.1	4.3	6.9	chr3	39154505	39154649	(159140910)	+	L2c	LINE/L2	3025	3165	(222)	2554045
2347	10.8	0.3	0.0	chr3	39322137	39322441	(158973118)	+	AluSx1	SINE/Alu	1	306	(6)	2554334
4322	12.2	2.6	5.1	chr3	39322442	39322505	(158973054)	C	LTR8	LTR/ERV1	(627)	64	1	2554332
772	15.8	0.8	5.0	chr3	39322506	39322558	(158973001)	+	AluJb	SINE/Alu	86	133	(179)	2554331
958	18.9	0.0	3.4	chr3	39322563	39322737	(158972822)	+	AluJb	SINE/Alu	137	305	(7)	2554335
11628	14.5	2.3	2.0	chr3	39361500	39365600	(158929959)	+	L1PA10	LINE/L1	13	5200	(2381)	2554406
2551	21.8	0.8	0.8	chr3	40299374	40299908	(157995651)	C	MSTD-int	LTR/ERVL-MaLR	(1199)	536	2	2555722
1879	14.4	3.9	1.1	chr3	40313030	40313306	(157982253)	+	AluSz6	SINE/Alu	3	287	(25)	2555739
1563	21.2	1.0	1.6	chr3	40407194	40407504	(157888055)	C	MER58B	DNA/hAT-Charlie	(0)	341	33	2555910
730	26.3	12.9	0.9	chr3	40407521	40407839	(157887720)	C	L2a	LINE/L2	(997)	2422	2060	2555906
2215	7.4	0.0	6.1	chr3	42683732	42684042	(155611517)	+	AluSq2	SINE/Alu	1	292	(21)	2559484
34	0.0	0.0	0.0	chr3	42684290	42684318	(155611241)	+	(TG)n	Simple_repeat	1	29	(0)	2559485
521	18.9	5.4	0.9	chr3	43584248	43584354	(154711205)	+	LTR18B	LTR/ERVL	1	112	(502)	2560826
1592	12.0	11.6	0.3	chr3	43584379	43584670	(154710889)	+	LTR18B	LTR/ERVL	286	614	(0)	2560826
812	12.2	0.0	0.0	chr3	43688404	43688526	(154607033)	+	LTR47B3	LTR/ERVL	1	123	(329)	2560991
2206	14.8	5.5	2.0	chr3	43688530	43688561	(154606998)	C	MSTA	LTR/ERVL-MaLR	(6)	422	395	2560992
2273	11.3	0.0	0.3	chr3	43688562	43688863	(154606696)	+	AluSx1	SINE/Alu	2	302	(10)	2560993
2423	6.8	1.7	0.0	chr3	43690061	43690354	(154605205)	C	AluSp	SINE/Alu	(14)	299	1	2560994
243	23.5	4.5	3.4	chr3	43771002	43771089	(154524470)	+	MamRep1879	DNA/hAT-Tip100?	38	126	(90)	2561137
234	10.5	9.5	0.0	chr3	44437872	44437909	(153857650)	C	MER41C	LTR/ERV1	(0)	521	480	2562099
892	8.2	0.0	0.0	chr3	44437901	44438010	(153857549)	C	MER41C	LTR/ERV1	(411)	110	1	2562099
366	11.3	0.0	0.0	chr3	44438012	44438064	(153857495)	C	MER41A	LTR/ERV1	(580)	54	2	2562097
365	18.4	11.2	0.0	chr3	44438073	44438159	(153857400)	C	ERVL-B4-int	LTR/ERVL	(4748)	919	822	2562094
492	28.5	6.6	0.9	chr3	44439445	44439674	(153855885)	+	LTR50	LTR/ERVL	349	592	(203)	2562104
1015	22.0	11.3	4.3	chr3	44439689	44440058	(153855501)	C	LTR52	LTR/ERVL	(14)	407	9	2562105
4308	8.9	3.0	2.7	chr3	44441213	44441528	(153854031)	C	MER41B	LTR/ERV1	(320)	314	1	2562107
288	25.4	6.3	6.9	chr3	44441529	44441540	(153854019)	C	L1ME3G	LINE/L1	(445)	479	468	2562106
208	34.8	2.8	0.0	chr3	44441542	44441610	(153853949)	C	MIRc	SINE/MIR	(129)	139	69	2562109
5739	5.7	1.0	0.0	chr3	45053730	45054413	(153241146)	C	LTR8	LTR/ERV1	(0)	691	1	2563131
321	2.6	0.0	0.0	chr3	45061246	45061284	(153234275)	+	MER4C	LTR/ERV1	1	39	(426)	2563146
3845	11.1	0.7	2.0	chr3	45061285	45061704	(153233855)	+	MER41A	LTR/ERV1	1	415	(139)	2563147
2138	10.6	0.0	0.0	chr3	45061705	45061978	(153233581)	C	AluSz	SINE/Alu	(37)	275	2	2563148
3845	11.1	0.7	2.0	chr3	45061979	45062118	(153233441)	+	MER41A	LTR/ERV1	416	554	(0)	2563147
2291	10.0	2.4	5.7	chr3	45062119	45062347	(153233212)	+	MER41B	LTR/ERV1	298	510	(124)	2563149
4406	10.4	2.8	0.2	chr3	45064653	45065269	(153230290)	C	MER41B	LTR/ERV1	(0)	634	1	2563155
312	31.9	11.1	3.1	chr3	45104561	45104751	(153190808)	C	MIRb	SINE/MIR	(54)	214	7	2563232
2083	11.1	12.5	8.7	chr3	45138877	45139219	(153156340)	C	MSTB1	LTR/ERVL-MaLR	(55)	377	1	2563302
281	24.3	3.6	2.7	chr3	45167630	45167739	(153127820)	C	LTR33	LTR/ERVL	(0)	515	405	2563358
3617	7.7	3.1	0.0	chr3	46432693	46433161	(151862398)	+	HERVK3-int	LTR/ERVK	6719	7202	(0)	2565375
3581	7.5	3.3	0.2	chr3	46433164	46433630	(151861929)	+	LTR3A	LTR/ERVK	3	484	(0)	2565375
1121	18.9	26.6	0.7	chr3	46508869	46509177	(151786382)	C	MER47B	DNA/TcMar-Tigger	(0)	418	1	2565503
294	17.2	0.0	4.9	chr3	46509178	46509197	(151786362)	C	MLT2B2	LTR/ERVL	(43)	519	500	2565502
834	11.5	0.0	0.0	chr3	46509199	46509311	(151786248)	+	MER83	LTR/ERV1	1	113	(335)	2565504
1667	13.3	8.2	6.7	chr3	46509386	46509731	(151785828)	+	MER83	LTR/ERV1	97	448	(0)	2565504
2513	7.3	0.0	0.9	chr3	46975831	46976145	(151319414)	C	AluSz	SINE/Alu	(0)	312	1	2566208
1775	26.1	15.7	3.5	chr3	47315159	47316335	(150979224)	+	HAL1	LINE/L1	187	1519	(988)	2566906
18	16.2	1.9	5.5	chr3	47476084	47476137	(150819422)	+	(GGCCG)n	Simple_repeat	1	55	(0)	2567227
1462	12.8	2.2	1.3	chr3	47476182	47476407	(150819152)	+	AluJo	SINE/Alu	2	229	(83)	2567228
1768	12.1	1.6	0.0	chr3	47780159	47780431	(150515128)	C	AluSx	SINE/Alu	(0)	312	39	2567955
319	21.2	0.0	7.6	chr3	47780586	47780677	(150514882)	C	L2a	LINE/L2	(1)	3425	3341	2567956
19	19.5	2.1	0.0	chr3	52533909	52533955	(145761604)	+	G-rich	Low_complexity	1	48	(0)	2575997
1736	15.7	18.1	1.7	chr3	53354817	53355238	(144940321)	C	LTR54	LTR/ERV1	(3)	507	1	2577507
533	34.3	1.0	6.9	chr3	53355239	53355353	(144940206)	+	L2a	LINE/L2	3014	3117	(309)	2577506
678	25.8	5.5	1.6	chr3	72143541	72143733	(126151826)	+	MIRb	SINE/MIR	54	254	(14)	2608559
18	0.0	7.1	0.0	chr3	72143741	72143778	(126151781)	+	(CAATA)n	Simple_repeat	1	40	(0)	2608560
12	11.1	6.9	0.0	chr3	98584064	98584092	(99711467)	+	A-rich	Low_complexity	1	31	(0)	2639125
4517	9.8	1.6	0.3	chr3	99776580	99777203	(98518356)	C	MER41B	LTR/ERV1	(0)	634	3	2640691
3595	16.9	6.5	4.2	chr3	101530223	101530982	(96764577)	C	LTR19C	LTR/ERV1	(0)	779	1	2643122
1102	11.4	1.3	1.3	chr3	101631887	101632044	(96663515)	C	AluSx	SINE/Alu	(8)	304	147	2643353
3604	12.4	3.0	1.1	chr3	101632045	101632597	(96662962)	+	LTR6A	LTR/ERV1	1	564	(0)	2643354
52313	17.9	1.7	1.8	chr3	101632600	101641508	(96654051)	+	HERVS71-int	LTR/ERV1	4	8909	(69)	2643354
3707	12.2	3.0	0.2	chr3	101641509	101642056	(96653503)	+	LTR6A	LTR/ERV1	1	564	(0)	2643355
712	20.8	2.6	7.5	chr3	101643829	101643989	(96651570)	+	L1M5	LINE/L1	5608	5760	(483)	2643340
4184	11.3	3.8	0.8	chr3	101643990	101644474	(96651085)	+	MER41B	LTR/ERV1	1	508	(126)	2643360
16	23.3	1.9	1.9	chr3	115146880	115146931	(83148628)	+	(TCCC)n	Simple_repeat	1	53	(0)	2661717
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
17	12.6	8.9	0.0	chr3	120559745	120559789	(77735770)	+	(CTCC)n	Simple_repeat	1	49	(0)	2669332
20	20.0	3.4	1.6	chr3	125375018	125375029	(72920530)	+	(CCGCCC)n	Simple_repeat	1	36	(25)	2676880
19	22.6	0.0	0.0	chr3	125375030	125375070	(72920489)	+	(C)n	Simple_repeat	1	41	(0)	2676881
20	20.0	3.4	1.6	chr3	125375071	125375076	(72920483)	+	(CCGCCC)n	Simple_repeat	37	61	(0)	2676880
35	10.0	0.0	0.0	chr3	125375248	125375302	(72920257)	+	(CTC)n	Simple_repeat	1	55	(0)	2676882
651	27.6	7.6	4.1	chr3	126200416	126200706	(72094853)	C	MER57C2	LTR/ERV1	(0)	434	84	2678240
411	17.2	11.6	0.0	chr3	126200711	126200809	(72094750)	C	LTR54	LTR/ERV1	(396)	114	3	2678241
4033	9.2	0.2	0.0	chr3	127732958	127733510	(70562049)	+	MER41A	LTR/ERV1	1	554	(0)	2680572
3992	15.4	4.0	2.2	chr3	134496116	134496811	(63798748)	C	LTR62	LTR/ERVL	(0)	709	1	2691560
13094	12.5	3.5	1.3	chr3	134496812	134497369	(63798190)	C	L1MA4A	LINE/L1	(684)	5619	5053	2691559
1839	17.2	0.0	0.3	chr3	135513179	135513504	(62782055)	+	HUERS-P1-int	LTR/ERV1	5939	6263	(0)	2692971
3438	11.4	4.6	2.1	chr3	135513505	135514076	(62781483)	+	LTR8	LTR/ERV1	1	587	(104)	2692971
3999	8.8	3.4	0.4	chr3	138409885	138410421	(59885138)	C	MER41A	LTR/ERV1	(0)	554	1	2697487
461	22.6	4.6	1.6	chr3	138410440	138410565	(59884994)	+	Charlie4z	DNA/hAT-Charlie	1	130	(37)	2697488
290	31.2	0.9	1.8	chr3	138875928	138876041	(59419518)	C	CR1-3_Croc	LINE/CR1	(1636)	1969	1857	2698397
3986	13.8	4.5	2.8	chr3	141312045	141312735	(56982824)	C	LTR62	LTR/ERVL	(5)	704	1	2702098
2259	9.2	0.0	0.0	chr3	141848850	141849157	(56446402)	C	AluSz	SINE/Alu	(0)	312	1	2703000
31	5.5	0.0	0.0	chr3	142027481	142027518	(56268041)	+	(CCTCTC)n	Simple_repeat	1	38	(0)	2703386
1343	20.3	12.4	1.4	chr3	146464916	146465345	(51830214)	+	LTR54B	LTR/ERV1	15	498	(0)	2709601
2310	14.4	14.3	0.0	chr3	152197848	152198284	(46097275)	C	LTR54	LTR/ERV1	(0)	510	1	2717866
4040	14.2	0.9	0.8	chr3	155076515	155077147	(43218412)	C	MER41B	LTR/ERV1	(0)	634	1	2722010
266	34.1	0.0	5.0	chr3	155077148	155077214	(43218345)	C	L1ME3E	LINE/L1	(6923)	353	288	2722003
199	18.9	0.0	0.0	chr3	156604166	156604202	(41691357)	+	L2a	LINE/L2	3390	3426	(0)	2724279
184	34.9	9.8	5.0	chr3	156604236	156604508	(41691051)	+	L2c	LINE/L2	3047	3333	(54)	2724280
378	22.1	4.6	2.8	chr3	156620256	156620362	(41675197)	C	MIR	SINE/MIR	(6)	256	148	2724312
2283	13.9	7.6	0.0	chr3	156620366	156620695	(41674864)	+	LTR18A	LTR/ERVL	1	357	(0)	2724313
15	13.9	0.0	0.0	chr3	157301359	157301382	(40994177)	+	(T)n	Simple_repeat	1	24	(0)	2725310
1409	30.7	15.8	4.0	chr3	157301389	157302337	(40993222)	+	L2c	LINE/L2	1726	2813	(606)	2725311
30	19.1	3.0	0.0	chr3	171895397	171895462	(26400097)	+	(CT)n	Simple_repeat	1	68	(0)	2745252
8419	2.8	0.8	0.1	chr3	186886874	186887834	(11407725)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2769184
1566	26.4	2.5	5.4	chr3	186887881	186888462	(11407097)	+	L1ME3F	LINE/L1	5457	5918	(325)	2769185
4801	3.1	0.2	0.2	chr3	187010516	187011071	(11284488)	+	LTR6B	LTR/ERV1	1	556	(2)	2769433
939	15.4	0.6	5.1	chr3	195161940	195162114	(3133445)	+	AluJb	SINE/Alu	134	300	(12)	2782457
380	22.2	13.1	2.3	chr3	195162117	195162245	(3133314)	C	MIRb	SINE/MIR	(118)	150	6	2782458
265	27.7	5.9	0.9	chr3	195164844	195164956	(3130603)	+	Charlie19a	DNA/hAT-Charlie	268	386	(0)	2782462
39	4.6	0.0	0.0	chr3	195181263	195181307	(3114252)	+	(CTGCGTGG)n	Simple_repeat	1	45	(0)	2782495
495	25.5	7.2	13.2	chr3	195181524	195181789	(3113770)	C	MIR	SINE/MIR	(10)	252	4	2782496
393	14.3	3.1	0.0	chr3	196047770	196047832	(2247727)	+	MER33	DNA/hAT-Charlie	17	81	(243)	2784089
2313	7.2	1.4	0.0	chr3	196279827	196280130	(2015429)	C	AluSp	SINE/Alu	(0)	313	1	2784644
3297	14.7	12.3	2.1	chr3	196337312	196337931	(1957628)	+	MER50	LTR/ERV1	20	711	(23)	2784802
181	34.6	10.5	2.2	chr3	196337961	196338099	(1957460)	C	L2c	LINE/L2	(179)	3208	3057	2784800
3448	12.3	11.4	1.4	chr3	196842744	196843192	(1452367)	C	MER41B	LTR/ERV1	(124)	510	1	2785874
2252	24.8	3.7	4.0	chr3	196843223	196843275	(1452284)	C	LTR82A	LTR/ERVL	(0)	872	833	2785876
1823	14.7	4.2	0.0	chr3	196843276	196843568	(1451991)	C	AluJb	SINE/Alu	(4)	308	3	2785877
555	24.4	2.9	1.5	chr3	197444481	197444617	(850942)	C	MIRb	SINE/MIR	(105)	163	25	2786915
451	25.2	6.6	1.6	chr3	197957319	197957447	(338112)	C	LTR16B	LTR/ERVL	(192)	271	136	2787891
1029	5.8	4.0	0.0	chr3	197957459	197957579	(337980)	C	AluYc	SINE/Alu	(11)	288	163	2787892
1991	23.1	12.1	9.5	chr4	3305362	3306171	(186908384)	C	MLT1F2-int	LTR/ERVL-MaLR	(5)	1484	651	2793043
1768	18.3	3.3	15.5	chr4	6568470	6568915	(183645640)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2798628
13	23.9	0.0	2.4	chr4	18021876	18021916	(172192639)	+	(CTCCC)n	Simple_repeat	1	41	(0)	2817244
458	22.7	12.2	8.0	chr4	26860087	26860273	(163354282)	+	MIR	SINE/MIR	57	252	(10)	2831733
477	32.7	9.2	4.3	chr4	38529181	38529576	(151684979)	C	L2b	LINE/L2	(34)	3353	2919	2847938
2666	16.3	3.3	3.9	chr4	48204052	48204566	(142009989)	+	MER68	LTR/ERVL	1	512	(51)	2863463
3725	12.4	0.5	3.1	chr4	55386892	55387472	(134827083)	+	MER61E	LTR/ERV1	1	566	(3)	2870804
238	29.2	7.3	3.3	chr4	55742565	55742656	(134471899)	+	L2c	LINE/L2	3291	3386	(1)	2871394
2718	13.4	10.4	4.4	chr4	55742770	55743339	(134471216)	+	LTR18B	LTR/ERVL	1	608	(6)	2871395
821	21.3	0.0	6.5	chr4	56700612	56700797	(133513758)	+	MLT1J	LTR/ERVL-MaLR	109	282	(230)	2873088
4347	13.4	0.0	1.9	chr4	56700861	56701506	(133513049)	+	MER41B	LTR/ERV1	1	634	(0)	2873092
13	23.8	5.4	3.9	chr4	56907974	56908047	(133306508)	+	(CCGAGGC)n	Simple_repeat	1	78	(0)	2873604
767	15.5	16.9	1.6	chr4	67702235	67702490	(122512065)	C	LTR54B	LTR/ERV1	(144)	366	16	2887347
261	18.8	0.0	0.0	chr4	67702558	67702605	(122511950)	+	MER104	DNA/TcMar-Tc2	134	181	(0)	2887348
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
3992	10.3	0.4	1.1	chr4	74096175	74096724	(116117831)	C	MER41B	LTR/ERV1	(88)	546	1	2895701
15	18.3	0.0	2.6	chr4	78615988	78616026	(111598529)	+	(TATAGA)n	Simple_repeat	1	39	(0)	2902411
3608	12.2	0.4	0.2	chr4	78616100	78616626	(111597929)	+	LTR64	LTR/ERV1	1	528	(0)	2902412
22	14.9	0.0	0.0	chr4	78667074	78667110	(111547445)	+	(GT)n	Simple_repeat	1	37	(0)	2902518
17	11.2	0.0	0.0	chr4	78667110	78667139	(111547416)	+	(GAGA)n	Simple_repeat	1	30	(0)	2902519
219	34.4	4.3	7.1	chr4	78691909	78692077	(111522478)	C	L2c	LINE/L2	(228)	3159	2996	2902571
2420	22.5	11.7	16.7	chr4	78693589	78694457	(111520098)	C	LTR8B	LTR/ERV1	(0)	820	1	2902577
1273	28.5	1.3	0.0	chr4	78694460	78694768	(111519787)	C	HUERS-P1-int	LTR/ERV1	(3)	6260	5948	2902577
1387	14.4	6.0	0.7	chr4	78711871	78712297	(111502258)	+	LTR54	LTR/ERV1	7	510	(0)	2902612
743	26.7	1.2	1.8	chr4	78721579	78721746	(111492809)	+	MIRb	SINE/MIR	10	176	(92)	2902621
1911	21.4	2.1	11.2	chr4	89493042	89493615	(100720940)	C	MER41C	LTR/ERV1	(0)	521	1	2918727
6371	13.1	3.7	1.3	chr4	89493616	89494694	(100719861)	+	Tigger3b	DNA/TcMar-Tigger	126	1231	(0)	2918728
15	17.5	4.6	5.9	chr4	101346054	101346118	(88868437)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	2934244
21	9.4	0.0	0.0	chr4	101346184	101346217	(88868338)	+	(AGGGGG)n	Simple_repeat	1	34	(0)	2934245
13	27.8	3.1	3.0	chr4	101346414	101346477	(88868078)	+	(CAC)n	Simple_repeat	1	66	(0)	2934246
34	4.0	7.7	0.0	chr4	104494918	104494969	(85719586)	+	(TC)n	Simple_repeat	1	56	(0)	2938272
13	13.0	0.0	7.7	chr4	104495055	104495093	(85719462)	+	G-rich	Low_complexity	1	39	(0)	2938273
3946	14.7	3.9	3.6	chr4	110248492	110249142	(79965413)	C	LTR62	LTR/ERVL	(1)	708	48	2946273
905	28.0	4.8	1.5	chr4	116342173	116342246	(73872309)	C	L1M5	LINE/L1	(409)	5764	5683	2954321
2145	13.7	10.1	1.3	chr4	116342247	116342698	(73871857)	+	LTR54B	LTR/ERV1	1	496	(2)	2954322
4074	8.4	1.4	0.0	chr4	116382822	116383367	(73831188)	+	MER41A	LTR/ERV1	1	554	(0)	2954375
4509	14.2	4.4	0.7	chr4	123349123	123349802	(66864753)	C	LTR62	LTR/ERVL	(2)	707	2	2963818
4484	8.9	0.9	4.6	chr4	127629748	127630405	(62584150)	C	MER41B	LTR/ERV1	(0)	634	1	2969334
448	19.2	15.7	0.6	chr4	127630446	127630618	(62583937)	C	Charlie29a	DNA/hAT-Charlie	(6)	713	510	2969335
3408	15.9	3.3	7.2	chr4	137967380	137968099	(52246456)	C	LTR8	LTR/ERV1	(0)	691	1	2982317
1652	31.5	5.0	7.4	chr4	137968100	137968367	(52246188)	+	ERV3-16A3_I-int	LTR/ERVL	1814	2071	(3155)	2982315
4592	10.0	2.5	1.0	chr4	143362297	143362920	(46851635)	C	MER41B	LTR/ERV1	(0)	634	1	2990207
582	32.3	9.6	0.4	chr4	143362935	143363161	(46851394)	C	MIRb	SINE/MIR	(16)	252	3	2990208
17	16.9	0.0	0.0	chr4	151038454	151038487	(39176068)	+	A-rich	Low_complexity	1	34	(0)	3000688
4232	10.5	3.8	1.0	chr4	151038612	151039227	(39175328)	+	MER41B	LTR/ERV1	1	634	(0)	3000689
818	13.3	17.9	0.0	chr4	173330688	173330875	(16883680)	+	Tigger7	DNA/TcMar-Tigger	2263	2491	(0)	3031447
2944	25.6	8.4	2.4	chr4	183348376	183348835	(6865720)	+	Arthur1	DNA/hAT-Tip100	1	507	(3440)	3044782
4144	13.2	2.0	0.0	chr4	183348836	183349456	(6865099)	+	MER41B	LTR/ERV1	1	634	(0)	3044783
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
17	20.0	7.0	0.0	chr4	183504710	183504766	(6709789)	+	(CGCAGG)n	Simple_repeat	1	61	(0)	3045073
4613	10.7	0.0	4.3	chr4	184339405	184339941	(5874614)	C	MER41B	LTR/ERV1	(107)	527	1	3046401
2789	23.4	2.0	7.8	chr4	184339944	184339990	(5874565)	+	L1ME1	LINE/L1	5591	5628	(724)	3046398
2293	8.9	2.9	0.7	chr4	184339991	184340294	(5874261)	C	AluY	SINE/Alu	(0)	311	1	3046403
1729	17.1	1.4	0.3	chr4	190111667	190111959	(102596)	C	HERVK-int	LTR/ERVK	(6840)	696	401	3054629
1218	8.2	0.0	0.0	chr4	190111960	190112106	(102449)	+	AluYh3	SINE/Alu	136	282	(29)	3054630
55	0.0	1.9	0.0	chr4	190112107	190112159	(102396)	+	(AAAT)n	Simple_repeat	1	54	(0)	3054631
421	15.2	0.0	0.0	chr5	5523237	5523302	(176014957)	+	MER41C	LTR/ERV1	1	66	(455)	3060644
3087	15.2	1.6	0.2	chr5	5585866	5586354	(175951905)	C	MER66C	LTR/ERV1	(59)	496	1	3060714
3171	18.1	5.1	7.2	chr5	10303607	10304078	(171234181)	+	MER72	LTR/ERV1	15	494	(228)	3066651
5872	7.6	0.3	2.6	chr5	18733176	18733974	(162804285)	C	LTR17	LTR/ERV1	(0)	780	1	3078441
4205	13.4	1.1	0.0	chr5	19241281	19241907	(162296352)	C	MER41B	LTR/ERV1	(0)	634	1	3079089
4234	12.6	0.8	0.3	chr5	23448224	23448854	(158089405)	C	MER41B	LTR/ERV1	(0)	634	1	3084765
1990	21.1	1.2	1.2	chr5	23448855	23448968	(158089291)	+	MER57B2	LTR/ERV1	291	403	(0)	3084764
3610	12.3	2.3	0.4	chr5	36442167	36442687	(145095572)	C	MER61E	LTR/ERV1	(38)	531	1	3102806
7372	8.6	1.0	0.2	chr5	37671897	37672890	(143865369)	+	LTR5B	LTR/ERVK	1	1002	(0)	3104901
2113	18.3	6.0	5.8	chr5	39150068	39150565	(142387694)	+	LTR54	LTR/ERV1	1	499	(11)	3107142
418	27.9	9.6	3.0	chr5	39157930	39158095	(142380164)	+	MamGypLTR3	LTR/Gypsy	742	981	(0)	3107155
204	22.2	0.0	6.9	chr5	39159809	39159866	(142378393)	C	L2b	LINE/L2	(1)	3374	3321	3107158
262	34.8	1.4	4.2	chr5	39159897	39160040	(142378219)	+	L2	LINE/L2	1776	1915	(1504)	3107157
261	33.3	0.5	0.0	chr5	39160130	39160211	(142378048)	+	MIRc	SINE/MIR	60	147	(121)	3107159
445	31.4	6.5	5.8	chr5	39178061	39178320	(142359939)	C	MER103C	DNA/hAT-Charlie	(0)	297	36	3107183
190	30.0	0.0	0.0	chr5	39178354	39178403	(142359856)	C	MIR	SINE/MIR	(10)	252	203	3107184
320	31.1	4.3	2.9	chr5	39178437	39178572	(142359687)	+	MIRb	SINE/MIR	22	159	(109)	3107185
12	12.0	13.3	0.0	chr5	43065259	43065303	(138472956)	+	A-rich	Low_complexity	1	51	(0)	3112478
17642	10.2	3.5	1.2	chr5	43072721	43075264	(138462995)	C	HERVH48-int	LTR/ERV1	(4050)	2604	1	3112489
243	26.3	1.3	7.3	chr5	60821278	60821359	(120716900)	+	L2a	LINE/L2	3348	3424	(2)	3131374
986	28.5	11.6	2.7	chr5	62261718	62262005	(119276254)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	277	3133450
2901	3.8	0.0	1.3	chr5	62262006	62262320	(119275939)	+	AluY	SINE/Alu	1	311	(0)	3133451
713	25.7	8.3	0.0	chr5	62265726	62265947	(119272312)	C	L2	LINE/L2	(939)	2480	2239	3133458
542	25.3	4.1	1.8	chr5	62265948	62266112	(119272147)	C	L1ME4a	LINE/L1	(9)	6115	5947	3133459
879	7.8	3.4	8.4	chr5	69091035	69091117	(112447142)	C	MER41A	LTR/ERV1	(66)	488	408	3143225
873	6.7	0.0	0.0	chr5	69091121	69091225	(112447034)	C	MER41A	LTR/ERV1	(449)	105	1	3143225
3421	7.8	2.0	0.4	chr5	69091233	69091647	(112446612)	+	LTR46	LTR/ERV1	1	422	(38)	3143227
6667	8.7	4.8	18.6	chr5	69514530	69516541	(112021718)	C	SVA_D	Retroposon/SVA	(6)	1380	5	3144223
4433	7.1	1.4	2.9	chr5	74591530	74591966	(106946293)	C	MER41A	LTR/ERV1	(109)	445	1	3152193
423	26.2	3.1	1.6	chr5	74592001	74592128	(106946131)	+	Charlie2a	DNA/hAT-Charlie	6	135	(2726)	3152195
241	26.9	2.5	4.7	chr5	77748281	77748370	(103789889)	+	MIRc	SINE/MIR	57	146	(116)	3157107
17	7.8	0.0	0.0	chr5	78667783	78667809	(102870450)	+	(TATTT)n	Simple_repeat	1	27	(0)	3158404
36	29.3	0.9	0.9	chr5	78667878	78667990	(102870269)	+	(CTC)n	Simple_repeat	1	114	(0)	3158405
2995	16.1	9.9	2.7	chr5	80204760	80205346	(101332913)	+	MER61F	LTR/ERV1	1	634	(42)	3161053
2242	4.3	10.3	0.4	chr5	80256854	80257133	(101281126)	C	AluSx1	SINE/Alu	(1)	311	1	3161178
465	25.0	1.1	2.7	chr5	80257188	80257317	(101280942)	C	MIR3	SINE/MIR	(100)	168	35	3161179
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
26190	9.0	4.8	2.6	chr5	81953664	81957567	(99580692)	+	HERVH-int	LTR/ERV1	1	3993	(3720)	3163910
1606	22.2	12.0	2.3	chr5	86527206	86527731	(95010528)	+	L1MC4	LINE/L1	7317	7900	(142)	3169896
15	24.4	2.9	4.3	chr5	88883183	88883250	(92655009)	+	(GCGA)n	Simple_repeat	1	70	(0)	3172895
22	29.9	1.4	0.0	chr5	88883219	88883287	(92654972)	+	(GC)n	Simple_repeat	1	70	(0)	3172896
42	7.2	0.0	1.6	chr5	88883299	88883360	(92654899)	+	(GGA)n	Simple_repeat	1	62	(0)	3172897
344	31.8	16.3	1.3	chr5	89042613	89042768	(92495491)	C	MIR3	SINE/MIR	(11)	197	14	3173084
4022	11.7	5.4	0.2	chr5	91291596	91292193	(90246066)	C	MER41B	LTR/ERV1	(0)	634	4	3175966
488	30.1	28.9	4.4	chr5	91292194	91292535	(90245724)	C	MamGypLTR2c	LTR/Gypsy	(575)	493	61	3175965
2499	6.1	0.3	0.3	chr5	95646130	95646426	(85891833)	C	AluSp	SINE/Alu	(16)	297	1	3181457
4249	4.9	1.6	0.2	chr5	95707337	95707886	(85830373)	C	LTR6B	LTR/ERV1	(0)	558	1	3181553
2278	8.3	0.9	0.0	chr5	95707887	95708199	(85830060)	C	HERVS71-int	LTR/ERV1	(69)	8909	8594	3181554
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
195	26.3	1.1	6.2	chr5	95729290	95729364	(85808895)	+	L2c	LINE/L2	3263	3349	(38)	3181578
1528	18.7	3.7	0.9	chr5	95729571	95729915	(85808344)	C	L1MB2	LINE/L1	(62)	6109	5755	3181580
3909	9.7	1.4	0.0	chr5	96808822	96809367	(84728892)	C	MER41A	LTR/ERV1	(0)	554	1	3183135
817	17.8	4.5	1.7	chr5	103057143	103057314	(78480945)	C	MER57A-int	LTR/ERV1	(5174)	1013	837	3190904
2326	11.9	0.1	2.6	chr5	103057315	103057717	(78480542)	+	MER41A	LTR/ERV1	1	436	(198)	3190911
1042	25.0	4.2	3.2	chr5	108531424	108532124	(73006135)	+	MER61E	LTR/ERV1	1	728	(0)	3197775
3147	11.1	2.4	3.5	chr5	109424300	109424550	(72113709)	+	MER84	LTR/ERV1	146	401	(106)	3198972
4798	11.8	0.0	1.7	chr5	109424551	109425251	(72113008)	+	LTR8	LTR/ERV1	1	689	(2)	3198974
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
29	9.9	0.0	0.0	chr5	111513121	111513163	(70025096)	+	(TG)n	Simple_repeat	1	43	(0)	3201528
322	24.8	6.9	1.3	chr5	126977265	126977410	(54560849)	+	L4_A_Mam	LINE/RTE-X	4681	4887	(103)	3222258
349	27.8	2.0	4.0	chr5	131170343	131170443	(50367816)	+	MIRb	SINE/MIR	20	118	(150)	3227461
333	34.0	9.4	0.1	chr5	131747239	131747403	(49790856)	+	L4_A_Mam	LINE/RTE-X	4124	4330	(660)	3228460
3418	15.3	2.9	0.7	chr5	132666872	132667416	(48870843)	+	MER41D	LTR/ERV1	1	557	(0)	3229728
1769	16.3	0.3	1.0	chr5	132787799	132788105	(48750154)	C	AluJb	SINE/Alu	(6)	306	2	3229915
2208	22.9	12.2	10.0	chr5	132788106	132788161	(48750098)	+	LTR102_Mam	LTR/ERVL	545	578	(273)	3229914
67	1.6	0.0	0.0	chr5	132788162	132788223	(48750036)	+	(GA)n	Simple_repeat	1	62	(0)	3229916
2208	22.9	12.2	10.0	chr5	132788224	132788503	(48749756)	+	LTR102_Mam	LTR/ERVL	579	851	(0)	3229914
2602	19.6	4.6	0.0	chr5	133932730	133933224	(47605035)	+	LTR53	LTR/ERVL	1	519	(0)	3231602
357	18.1	6.0	2.1	chr5	133936993	133937088	(47601171)	+	L1MB2	LINE/L1	6069	6168	(3)	3231607
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
289	21.1	0.0	1.7	chr5	141970105	141970162	(39568097)	C	Charlie4z	DNA/hAT-Charlie	(95)	72	16	3244975
21	23.4	0.0	0.0	chr5	147782642	147782692	(33755567)	+	(CAG)n	Simple_repeat	1	51	(0)	3254832
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
204	34.7	8.3	10.9	chr5	149344959	149345307	(32192952)	+	L2b	LINE/L2	2994	3332	(43)	3257530
2449	9.7	0.3	0.0	chr5	151099851	151100160	(30438099)	+	AluSp	SINE/Alu	2	312	(1)	3261154
197	28.6	9.5	3.7	chr5	154653888	154653996	(26884263)	C	MIR3	SINE/MIR	(77)	131	16	3267691
28	34.9	2.2	3.3	chr5	154682789	154682966	(26855293)	+	(CTCCCCC)n	Simple_repeat	1	182	(0)	3267769
693	11.2	0.0	0.0	chr5	157278760	157278857	(24259402)	+	MER57A-int	LTR/ERV1	5798	5895	(292)	3272425
974	16.5	9.2	1.2	chr5	157278864	157279121	(24259138)	+	LTR54B	LTR/ERV1	216	496	(2)	3272426
2245	23.2	2.9	2.1	chr5	159393811	159394325	(22143934)	C	LTR53	LTR/ERVL	(0)	519	1	3276008
895	16.1	1.1	8.6	chr5	159811721	159811887	(21726372)	+	MLT1A0-int	LTR/ERVL-MaLR	4	163	(1572)	3276761
4388	10.6	3.6	0.3	chr5	159811888	159812500	(21725759)	+	MER41B	LTR/ERV1	1	634	(0)	3276762
1876	14.2	11.0	11.0	chr5	169735754	169736180	(11802079)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	3292276
3648	11.9	4.5	1.9	chr5	176197190	176197754	(5340505)	C	LTR19B	LTR/ERV1	(0)	580	1	3304808
710	12.0	6.4	0.0	chr5	176432708	176432824	(5105435)	+	AluSx3	SINE/Alu	179	303	(8)	3305238
388	16.9	3.3	0.0	chr5	176432827	176432915	(5105344)	+	L1M4	LINE/L1	4471	4562	(1584)	3305239
47	10.3	0.0	1.3	chr5	176432985	176433060	(5105199)	+	(CCCCTC)n	Simple_repeat	1	76	(0)	3305240
2513	14.4	10.6	7.9	chr5	176994560	176995117	(4543142)	C	LTR4	LTR/ERV1	(0)	596	22	3306366
12	21.7	0.0	0.0	chr5	177447121	177447152	(4091107)	+	GA-rich	Low_complexity	1	32	(0)	3307435
16	16.8	0.0	0.0	chr5	177447249	177447276	(4090983)	+	(C)n	Simple_repeat	1	28	(0)	3307436
14	15.7	0.0	5.1	chr5	181052900	181052938	(485321)	+	G-rich	Low_complexity	1	39	(0)	3313573
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
890	19.4	2.8	0.0	chr6	2853735	2853909	(167952070)	C	L1MC3	LINE/L1	(391)	7394	7215	3318009
334	11.6	4.2	2.8	chr6	2853920	2853990	(167951989)	C	L1MC3	LINE/L1	(1310)	6475	6404	3318009
4258	12.6	0.2	5.1	chr6	2979919	2980585	(167825394)	+	MER41B	LTR/ERV1	1	634	(0)	3318195
44	0.0	0.0	0.0	chr6	3158318	3158355	(167647624)	+	(GT)n	Simple_repeat	1	38	(0)	3318485
727	24.5	1.4	1.4	chr6	3158466	3158672	(167647307)	+	MER33	DNA/hAT-Charlie	5	211	(113)	3318486
185	22.2	10.0	0.0	chr6	3337542	3337595	(167468384)	C	MIRb	SINE/MIR	(175)	93	34	3318754
2427	16.1	4.6	10.0	chr6	3337812	3338330	(167467649)	+	MER34A	LTR/ERV1	1	495	(76)	3318755
4477	7.6	0.0	0.0	chr6	3339426	3339979	(167466000)	+	MER41A	LTR/ERV1	1	554	(0)	3318757
1598	28.5	14.5	1.7	chr6	3392439	3393299	(167412680)	C	L2a	LINE/L2	(581)	2838	1849	3318822
644	24.7	5.5	1.0	chr6	3393339	3393530	(167412449)	C	MER3	DNA/hAT-Charlie	(8)	201	1	3318824
54	8.0	1.2	0.0	chr6	4482946	4483025	(166322954)	+	(GAAG)n	Simple_repeat	1	81	(0)	3320512
58	4.9	0.0	0.0	chr6	4483250	4483312	(166322667)	+	(CA)n	Simple_repeat	1	63	(0)	3320513
705	24.5	20.0	1.5	chr6	4687529	4688159	(166117820)	+	L1MEh	LINE/L1	874	1585	(650)	3320864
1020	27.7	13.2	5.5	chr6	4688158	4688826	(166117153)	+	L1MEh	LINE/L1	1780	2507	(0)	3320864
264	28.3	8.4	4.0	chr6	7042403	7042527	(163763452)	C	MIR3	SINE/MIR	(61)	147	17	3324463
2597	7.8	0.0	0.0	chr6	8099465	8099751	(162706228)	+	AluSp	SINE/Alu	1	287	(26)	3326165
48	0.0	0.0	0.0	chr6	8099752	8099792	(162706187)	+	(AC)n	Simple_repeat	1	41	(0)	3326166
1798	17.4	0.3	5.4	chr6	8099802	8099890	(162706089)	+	Tigger3a	DNA/TcMar-Tigger	261	348	(0)	3326164
246	30.5	2.8	2.8	chr6	8099896	8100003	(162705976)	C	L1MC5a	LINE/L1	(2234)	543	436	3326167
18	22.7	1.7	3.3	chr6	8435410	8435469	(162370510)	+	(CTC)n	Simple_repeat	1	61	(0)	3326721
393	32.2	6.6	3.4	chr6	10662183	10662301	(160143678)	+	L2	LINE/L2	2497	2622	(797)	3329952
3572	13.7	4.6	4.4	chr6	10662302	10662484	(160143495)	+	MER41B	LTR/ERV1	1	175	(459)	3329953
1969	14.0	0.7	1.3	chr6	10662485	10662784	(160143195)	+	AluSz	SINE/Alu	1	298	(14)	3329954
4556	18.9	5.7	4.8	chr6	11324457	11325073	(159480906)	+	MER45B	DNA/hAT-Tip100	1	633	(407)	3331067
12	25.3	0.0	5.8	chr6	13574519	13574570	(157231409)	+	GA-rich	Low_complexity	1	52	(0)	3334517
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
3600	23.3	5.0	13.2	chr6	14076892	14077331	(156728648)	+	L1MC5a	LINE/L1	1577	2004	(773)	3335416
4427	10.5	1.1	0.8	chr6	14077332	14077963	(156728016)	+	MER41B	LTR/ERV1	1	634	(0)	3335419
583	29.1	5.9	0.9	chr6	15062681	15062905	(155743074)	+	MER46C	DNA/TcMar-Tigger	3	239	(99)	3337129
293	31.7	0.3	0.6	chr6	15386141	15386252	(155419727)	C	MIR	SINE/MIR	(156)	112	2	3337875
16	25.5	2.5	0.0	chr6	15386260	15386299	(155419680)	+	(TC)n	Simple_repeat	1	41	(0)	3337883
20	7.8	0.0	0.0	chr6	15386305	15386331	(155419648)	+	(TG)n	Simple_repeat	1	27	(0)	3337884
7743	12.0	1.4	2.3	chr6	15560382	15561652	(155244327)	+	MER41-int	LTR/ERV1	4688	5946	(0)	3338068
3997	14.3	1.4	1.9	chr6	15561654	15562289	(155243690)	+	MER41B	LTR/ERV1	2	634	(0)	3338068
4557	11.2	0.6	0.6	chr6	15895642	15896271	(154909708)	C	MER41B	LTR/ERV1	(2)	632	3	3338638
3770	17.0	3.9	3.7	chr6	15900894	15901602	(154904377)	C	MER50	LTR/ERV1	(23)	711	1	3338649
3945	13.5	3.6	6.5	chr6	15904250	15904961	(154901018)	C	LTR8	LTR/ERV1	(0)	691	1	3338657
4881	9.8	1.0	5.1	chr6	15907332	15907866	(154898113)	C	LTR8	LTR/ERV1	(170)	521	1	3338660
2444	19.0	3.0	4.1	chr6	16031415	16031909	(154774070)	+	MER61E	LTR/ERV1	85	531	(38)	3338877
2280	13.5	7.4	0.3	chr6	16044129	16044507	(154761472)	C	LTR47A	LTR/ERVL	(42)	410	3	3338899
2133	13.9	0.7	0.0	chr6	16214180	16214489	(154591490)	C	AluSx1	SINE/Alu	(0)	312	1	3339168
1060	16.1	0.5	11.1	chr6	16214490	16214666	(154591313)	C	LTR8	LTR/ERV1	(522)	169	1	3339167
452	27.8	12.2	2.4	chr6	16214672	16214832	(154591147)	+	Charlie2b	DNA/hAT-Charlie	2457	2647	(135)	3339169
2815	20.6	1.9	9.6	chr6	16235561	16236310	(154569669)	C	LTR8	LTR/ERV1	(0)	691	1	3339205
3387	14.0	11.9	1.6	chr6	16265461	16266134	(154539845)	+	LTR12	LTR/ERV1	1	753	(73)	3339250
2237	7.0	3.7	1.9	chr6	16267380	16267699	(154538280)	+	LTR12_	LTR/ERV1	363	688	(0)	3339254
1477	17.3	6.2	7.2	chr6	16269823	16270117	(154535862)	C	MLT1A0	LTR/ERVL-MaLR	(60)	305	1	3339260
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
2004	16.0	0.0	1.0	chr6	17971418	17971723	(152834256)	C	AluJb	SINE/Alu	(8)	304	2	3342157
459	22.1	11.2	6.2	chr6	17971724	17971838	(152834141)	+	Charlie18a	DNA/hAT-Charlie	224	342	(0)	3342156
20	4.3	0.0	0.0	chr6	17972834	17972857	(152833122)	+	(A)n	Simple_repeat	1	24	(0)	3342158
215	19.0	10.8	0.0	chr6	20203593	20203650	(150602329)	C	L2c	LINE/L2	(8)	3379	3315	3345591
1568	18.8	15.3	0.2	chr6	20203665	20204085	(150601894)	+	LTR54B	LTR/ERV1	1	496	(2)	3345592
4361	10.9	1.6	0.5	chr6	24756192	24756815	(146049164)	C	MER41B	LTR/ERV1	(0)	634	4	3352489
242	36.2	5.0	9.2	chr6	24756816	24756900	(146049079)	C	L3	LINE/CR1	(1506)	2593	2522	3352486
231	33.3	0.0	0.0	chr6	25671179	25671259	(145134720)	C	MIRb	SINE/MIR	(83)	185	105	3353940
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
2009	12.2	0.7	1.6	chr6	26198329	26198631	(144607348)	C	AluSg	SINE/Alu	(10)	300	1	3354813
1955	9.5	2.5	1.8	chr6	26233358	26233640	(144572339)	C	AluSg	SINE/Alu	(20)	290	6	3354868
210	31.3	0.0	4.8	chr6	26305006	26305109	(144500870)	C	MER5B	DNA/hAT-Charlie	(63)	115	17	3354980
1155	26.6	7.1	3.4	chr6	26336287	26336722	(144469257)	+	MER90	LTR/ERV1	107	559	(16)	3355050
744	29.3	6.3	6.6	chr6	26336934	26337236	(144468743)	C	LTR33A	LTR/ERVL	(126)	394	93	3355051
656	15.7	0.0	5.7	chr6	26353821	26353919	(144452060)	C	MER70-int	LTR/ERVL	(4396)	627	533	3355088
553	19.2	1.0	2.0	chr6	26353930	26354030	(144451949)	+	MER70-int	LTR/ERVL	27	126	(4897)	3355093
1574	20.5	2.3	1.2	chr6	26354028	26354368	(144451611)	C	MER70-int	LTR/ERVL	(4512)	511	167	3355088
573	25.0	5.6	7.5	chr6	26400612	26400665	(144405314)	C	MLT1J	LTR/ERVL-MaLR	(24)	488	427	3355181
29	0.0	3.2	0.0	chr6	26400666	26400696	(144405283)	+	(TTGTT)n	Simple_repeat	1	32	(0)	3355182
573	25.0	5.6	7.5	chr6	26400697	26400896	(144405083)	C	MLT1J	LTR/ERVL-MaLR	(86)	426	240	3355181
300	15.4	0.0	0.0	chr6	26520451	26520502	(144285477)	C	L1ME3A	LINE/L1	(3)	6170	6119	3355395
3957	7.2	1.7	0.4	chr6	26549862	26550375	(144255604)	C	MER41C	LTR/ERV1	(0)	521	1	3355447
645	7.1	0.0	1.2	chr6	26550403	26550486	(144255493)	+	AluSx3	SINE/Alu	217	299	(12)	3355448
2277	11.8	0.3	1.9	chr6	27129941	27130255	(143675724)	C	AluSx1	SINE/Alu	(2)	310	1	3356343
4115	12.1	6.3	0.3	chr6	27135841	27136436	(143669543)	C	MER41B	LTR/ERV1	(0)	634	1	3356348
229	32.4	8.5	0.0	chr6	27136437	27136507	(143669472)	C	L2	LINE/L2	(800)	2619	2543	3356347
2221	9.3	3.7	1.7	chr6	27142271	27142561	(143663418)	C	AluSq10	SINE/Alu	(14)	299	3	3356359
905	23.6	12.0	0.6	chr6	27142562	27142628	(143663351)	+	Charlie5	DNA/hAT-Charlie	2532	2608	(16)	3356358
2352	11.4	0.7	0.0	chr6	27142637	27142934	(143663045)	C	AluSx4	SINE/Alu	(10)	300	1	3356360
1685	13.8	1.2	2.0	chr6	27144795	27145047	(143660932)	C	AluSz	SINE/Alu	(12)	300	50	3356365
633	2.7	0.0	0.0	chr6	27668583	27668657	(143137322)	+	tRNA-Ile-ATT	tRNA	1	75	(2)	3357335
3642	7.6	0.2	0.4	chr6	27773907	27774370	(143031609)	+	LTR2	LTR/ERV1	1	463	(0)	3357570
513	21.9	13.4	0.0	chr6	27809573	27809759	(142996220)	+	MER33	DNA/hAT-Charlie	1	216	(108)	3357634
1747	11.2	0.0	0.4	chr6	27812495	27812736	(142993243)	+	AluSx3	SINE/Alu	68	308	(3)	3357637
2135	13.2	1.0	0.0	chr6	27812871	27813174	(142992805)	+	AluJr	SINE/Alu	1	307	(5)	3357638
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
606	13.7	2.1	0.0	chr6	27834878	27834972	(142971007)	+	LTR49	LTR/ERV1	1	97	(525)	3357677
680	14.5	18.5	1.9	chr6	27835019	27835292	(142970687)	+	LTR49	LTR/ERV1	227	615	(29)	3357677
626	1.4	0.0	0.0	chr6	27902908	27902978	(142903001)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	3357803
4976	14.1	3.2	2.2	chr6	28220221	28221124	(142584855)	C	MER49	LTR/ERV1	(8)	915	3	3358273
260	28.0	6.7	2.3	chr6	28224901	28225028	(142580951)	+	HAL1ME	LINE/L1	2324	2457	(8)	3358287
410	28.1	0.8	1.5	chr6	28225034	28225163	(142580816)	+	Charlie13a	DNA/hAT-Charlie	1376	1504	(10)	3358288
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
13	9.7	9.1	0.0	chr6	28336875	28336907	(142469072)	+	(GTTGTT)n	Simple_repeat	1	36	(0)	3358464
343	23.0	3.3	8.1	chr6	28351463	28351623	(142454356)	C	L1MC5	LINE/L1	(3)	9301	9149	3358491
23	31.4	2.5	4.1	chr6	28351629	28351746	(142454233)	+	(CCTC)n	Simple_repeat	1	121	(0)	3358492
958	26.2	4.2	9.7	chr6	28351748	28352221	(142453758)	C	L1MC5a	LINE/L1	(119)	2658	2212	3358493
2522	11.9	20.7	8.3	chr6	28353865	28354395	(142451584)	C	LTR18B	LTR/ERVL	(0)	614	1	3358498
36	36.5	2.8	0.9	chr6	28553480	28553691	(142252288)	+	GA-rich	Low_complexity	1	218	(0)	3358814
833	25.9	16.9	8.1	chr6	28553692	28553927	(142252052)	+	LTR41C	LTR/ERVL	1	244	(457)	3358815
27	0.0	6.1	0.0	chr6	28720586	28720618	(142085361)	+	(GTTTT)n	Simple_repeat	1	35	(0)	3359089
2325	8.6	0.0	0.4	chr6	28720619	28720896	(142085083)	C	AluSc8	SINE/Alu	(33)	278	2	3359090
2493	6.9	0.3	0.0	chr6	28898109	28898411	(141907568)	C	AluSg	SINE/Alu	(6)	304	1	3359415
2020	12.1	2.0	1.4	chr6	28898431	28898727	(141907252)	C	AluSz	SINE/Alu	(12)	300	2	3359416
2294	8.8	1.0	0.3	chr6	28924297	28924601	(141881378)	+	AluSc	SINE/Alu	1	307	(2)	3359466
480	25.6	8.6	3.7	chr6	29650396	29650582	(141155397)	C	L3	LINE/CR1	(116)	3983	3787	3360417
329	31.9	4.0	1.6	chr6	30769917	30770037	(140035942)	C	HAL1b	LINE/L1	(31)	2390	2267	3362189
302	30.4	9.9	8.6	chr6	30770041	30770389	(140035590)	+	L2c	LINE/L2	2996	3349	(38)	3362190
364	30.6	10.2	2.7	chr6	30781620	30781846	(140024133)	C	MIRc	SINE/MIR	(15)	253	1	3362216
12	26.6	2.0	1.9	chr6	31490518	31490568	(139315411)	+	GA-rich	Low_complexity	1	52	(0)	3363396
1131	14.5	0.0	0.0	chr6	31533638	31533789	(139272190)	C	FAM	SINE/Alu	(22)	163	12	3363460
1848	16.1	4.0	0.3	chr6	31534006	31534297	(139271682)	C	AluJb	SINE/Alu	(9)	303	1	3363461
15	16.0	2.9	0.0	chr6	31547391	31547425	(139258554)	+	(CCCTC)n	Simple_repeat	1	36	(0)	3363481
260	35.8	14.3	0.5	chr6	31725783	31726203	(139079776)	+	L2c	LINE/L2	2327	2815	(604)	3363787
249	28.8	5.5	13.6	chr6	31726300	31726520	(139079459)	+	L2c	LINE/L2	2961	3165	(222)	3363787
242	25.9	13.5	9.8	chr6	31739151	31739254	(139066725)	+	L2c	LINE/L2	3289	3426	(0)	3363799
283	20.6	0.0	2.9	chr6	31739518	31739587	(139066392)	C	MIR	SINE/MIR	(6)	256	189	3363801
15	21.8	2.7	0.0	chr6	31739966	31740002	(139065977)	+	(GC)n	Simple_repeat	1	38	(0)	3363802
567	13.5	1.1	1.8	chr6	31750260	31750369	(139055610)	+	FLAM_C	SINE/Alu	1	218	(84)	3363824
334	30.1	4.6	0.1	chr6	31750422	31750572	(139055407)	+	MIRc	SINE/MIR	21	181	(27)	3363825
18	11.3	2.5	2.4	chr6	31807224	31807263	(138998716)	+	A-rich	Low_complexity	1	41	(0)	3363933
2228	11.0	0.3	0.0	chr6	31807302	31807602	(138998377)	+	AluSx1	SINE/Alu	1	302	(10)	3363934
2312	7.3	2.6	0.3	chr6	31863224	31863524	(138942455)	C	AluSx	SINE/Alu	(4)	308	1	3364051
24	23.9	3.8	1.2	chr6	31897640	31897719	(138908260)	+	(GCC)n	Simple_repeat	1	83	(0)	3364122
1943	9.3	0.0	0.4	chr6	32131345	32131602	(138674377)	+	AluSx1	SINE/Alu	51	307	(5)	3364432
17	15.3	0.0	0.0	chr6	33276840	33276868	(137529111)	+	(T)n	Simple_repeat	1	29	(0)	3366123
15	4.2	4.0	0.0	chr6	33410885	33410909	(137395070)	+	(GAGGT)n	Simple_repeat	1	26	(0)	3366412
24	38.9	0.0	0.0	chr6	33410913	33411023	(137394956)	+	(CCC)n	Simple_repeat	1	111	(0)	3366413
13	25.5	0.0	0.0	chr6	33411014	33411050	(137394929)	+	(CTG)n	Simple_repeat	1	37	(0)	3366414
13	31.0	3.2	0.0	chr6	33411222	33411284	(137394695)	+	G-rich	Low_complexity	1	65	(0)	3366415
30	0.0	0.0	0.0	chr6	33789334	33789362	(137016617)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3367133
681	19.8	0.0	0.0	chr6	34610929	34611039	(136194940)	+	AluJo	SINE/Alu	1	111	(201)	3368749
20	10.0	0.0	0.0	chr6	34611042	34611095	(136194884)	+	(TCCCCC)n	Simple_repeat	1	54	(0)	3368750
15	0.0	0.0	4.3	chr6	34611074	34611096	(136194883)	+	(CTTT)n	Simple_repeat	1	23	(0)	3368751
736	14.3	1.7	6.3	chr6	34611103	34611245	(136194734)	C	AluJb	SINE/Alu	(172)	130	1	3368752
863	16.5	0.0	0.0	chr6	34664348	34664468	(136141511)	C	FLAM_A	SINE/Alu	(20)	122	2	3368858
8454	3.4	0.0	0.1	chr6	34719460	34720428	(136085551)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3369011
17	0.0	7.4	0.0	chr6	34757806	34757832	(136048147)	+	(TTTTG)n	Simple_repeat	1	29	(0)	3369130
452	17.7	14.0	2.1	chr6	36350829	36350972	(134455007)	+	LTR67B	LTR/ERVL	457	620	(0)	3372311
1085	25.3	12.8	7.9	chr6	36820519	36820658	(133985321)	C	L2a	LINE/L2	(0)	3426	3265	3373363
1731	17.5	1.0	3.2	chr6	36820659	36820966	(133985013)	+	AluJo	SINE/Alu	2	302	(10)	3373364
1085	25.5	13.0	5.5	chr6	36820967	36821458	(133984521)	C	L2a	LINE/L2	(162)	3264	2756	3373363
245	27.4	0.0	0.0	chr6	36834711	36834761	(133971218)	+	MIRb	SINE/MIR	218	268	(0)	3373394
26	18.9	0.0	0.0	chr6	36840090	36840138	(133965841)	+	(GT)n	Simple_repeat	1	49	(0)	3373407
14640	10.0	5.4	1.8	chr6	36884285	36885063	(133920916)	+	MER57-int	LTR/ERV1	6731	7537	(0)	3373495
46	0.0	0.0	0.0	chr6	36960326	36960364	(133845615)	+	(TG)n	Simple_repeat	1	39	(0)	3373649
14	7.1	6.2	2.9	chr6	36960626	36960657	(133845322)	+	(CCCT)n	Simple_repeat	1	34	(0)	3373650
2186	12.8	0.7	0.7	chr6	37089258	37089555	(133716424)	C	AluSz6	SINE/Alu	(12)	300	3	3373914
537	29.9	14.5	2.3	chr6	37089567	37089909	(133716070)	+	L3	LINE/CR1	3619	4010	(89)	3373910
1846	10.4	3.5	5.7	chr6	37175979	37176275	(133629704)	C	AluSx1	SINE/Alu	(21)	291	2	3374142
1760	27.1	6.7	2.3	chr6	37207620	37208528	(133597451)	C	L2a	LINE/L2	(1)	3425	2449	3374237
1890	23.2	5.2	4.3	chr6	37240131	37240685	(133565294)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	3374322
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
22	32.4	4.0	0.0	chr6	39037339	39037437	(131768542)	+	(CT)n	Simple_repeat	1	103	(0)	3377369
3920	13.4	3.1	0.6	chr6	41278830	41279451	(129526528)	+	MER51C	LTR/ERV1	1	638	(2)	3380882
978	18.8	6.5	0.5	chr6	41934088	41934290	(128871689)	+	MER58B	DNA/hAT-Charlie	45	260	(81)	3382122
979	18.9	6.4	5.3	chr6	41934292	41934537	(128871442)	+	Tigger9b	DNA/TcMar-Tigger	6	254	(370)	3382123
1287	13.0	11.8	1.6	chr6	41934533	41934790	(128871189)	+	Tigger9b	DNA/TcMar-Tigger	336	623	(1)	3382124
328	30.4	9.4	4.6	chr6	41938759	41938910	(128867069)	+	MIR3	SINE/MIR	38	197	(11)	3382129
12	10.0	0.0	0.0	chr6	41942103	41942124	(128863855)	+	(TCAT)n	Simple_repeat	1	22	(0)	3382132
255	29.3	0.0	0.0	chr6	41942266	41942340	(128863639)	C	MIR	SINE/MIR	(173)	89	15	3382133
12	11.6	3.3	3.2	chr6	41966963	41966992	(128838987)	+	(ATA)n	Simple_repeat	1	31	(0)	3382202
15	3.6	0.0	11.1	chr6	42010424	42010459	(128795520)	+	(GGGA)n	Simple_repeat	1	36	(0)	3382324
247	30.3	11.0	6.8	chr6	42017426	42017659	(128788320)	+	L2c	LINE/L2	3076	3320	(67)	3382348
705	27.1	7.1	2.8	chr6	42028634	42028849	(128777130)	+	MIRb	SINE/MIR	25	250	(18)	3382374
19	17.4	0.0	0.0	chr6	42046637	42046670	(128759309)	+	(CA)n	Simple_repeat	1	34	(0)	3382418
20	25.6	2.6	2.5	chr6	42782747	42782824	(128023155)	+	G-rich	Low_complexity	1	80	(0)	3384025
14	14.9	5.4	0.0	chr6	42783122	42783158	(128022821)	+	(CGCTCC)n	Simple_repeat	1	39	(0)	3384026
13	16.4	8.6	3.2	chr6	42783234	42783291	(128022688)	+	(CCGCGG)n	Simple_repeat	1	63	(0)	3384027
47	4.2	0.0	0.0	chr6	43702713	43702761	(127103218)	+	(TG)n	Simple_repeat	1	49	(0)	3385855
247	29.1	1.1	1.1	chr6	43969192	43969278	(126836701)	+	MIRb	SINE/MIR	80	166	(102)	3386342
282	24.8	10.3	5.0	chr6	43969462	43969580	(126836399)	+	L3b	LINE/CR1	4948	5073	(159)	3386343
3427	22.6	4.0	4.3	chr6	43973932	43975333	(126830646)	C	L1ME1	LINE/L1	(28)	6151	4729	3386352
217	27.1	0.0	0.0	chr6	44064884	44064931	(126741048)	C	L2c	LINE/L2	(70)	3317	3270	3386502
183	25.9	3.6	0.0	chr6	44065163	44065216	(126740763)	C	L2c	LINE/L2	(62)	3325	3270	3386503
16	20.8	0.0	0.0	chr6	44127606	44127638	(126678341)	+	(C)n	Simple_repeat	1	33	(0)	3386612
397	28.5	0.7	7.4	chr6	47243206	47243368	(123562611)	C	L1ME4b	LINE/L1	(97)	795	644	3391447
2818	14.1	0.6	8.0	chr6	49939896	49940418	(120865561)	C	MER66D	LTR/ERV1	(0)	484	1	3395073
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
23	9.7	0.0	6.0	chr6	52995981	52996040	(117809939)	+	(TTTTTAA)n	Simple_repeat	1	56	(0)	3399375
1799	6.6	4.6	0.0	chr6	52996047	52996272	(117809707)	C	AluSx	SINE/Alu	(75)	237	1	3399376
1241	24.0	4.4	5.1	chr6	67879083	67879506	(102926473)	+	MER39	LTR/ERV1	1	603	(104)	3416014
7791	1.8	0.0	0.0	chr6	67879824	67880939	(102925040)	+	L1PA2	LINE/L1	5032	6147	(8)	3416015
13473	28.8	5.7	5.1	chr6	67881437	67888662	(102917317)	C	HERVH-int	LTR/ERV1	(0)	7713	596	3416017
1477	24.3	8.7	1.0	chr6	67889062	67889473	(102916506)	C	LTR7C	LTR/ERV1	(0)	471	25	3416018
271	29.9	2.5	1.9	chr6	67895877	67896009	(102909970)	C	MLT1L	LTR/ERVL-MaLR	(374)	138	1	3416030
13	16.6	0.0	0.0	chr6	68041631	68041657	(102764322)	+	(CAA)n	Simple_repeat	1	27	(0)	3416208
16	13.2	0.0	0.0	chr6	70337466	70337490	(100468489)	+	(T)n	Simple_repeat	1	25	(0)	3419066
2292	7.4	1.1	0.3	chr6	73514185	73514468	(97291511)	C	AluY	SINE/Alu	(24)	287	2	3423639
957	17.0	23.6	0.0	chr6	73514470	73514693	(97291286)	C	AluSc8	SINE/Alu	(18)	293	1	3423640
3782	9.9	10.4	2.2	chr6	73564658	73565059	(97240920)	+	MER41B	LTR/ERV1	1	456	(178)	3423773
8150	2.6	0.7	24.2	chr6	75440988	75442779	(95363200)	C	SVA_D	Retroposon/SVA	(6)	1380	14	3426212
1716	25.0	10.1	8.6	chr6	83974325	83975082	(86830897)	C	LTR19C	LTR/ERV1	(2)	777	7	3437229
482	25.6	4.8	2.0	chr6	87723262	87723414	(83082565)	+	MLT1O	LTR/ERVL-MaLR	94	328	(344)	3442078
16	0.0	5.0	0.0	chr6	87723579	87723598	(83082381)	+	(AG)n	Simple_repeat	1	21	(0)	3442079
3697	13.3	0.4	1.8	chr6	89008407	89008972	(81797007)	C	MER41B	LTR/ERV1	(73)	561	4	3443960
640	19.3	49.4	0.0	chr6	89008975	89009136	(81796843)	+	MER34-int	LTR/ERV1	7965	8206	(1)	3443961
1230	24.2	11.9	9.5	chr6	89009139	89009624	(81796355)	+	LTR48B	LTR/ERV1	4	505	(139)	3443961
4071	12.4	2.7	1.3	chr6	96519934	96520553	(74285426)	C	MER41B	LTR/ERV1	(5)	629	1	3453833
367	6.7	0.0	9.1	chr6	96520556	96520621	(74285358)	C	L1MA3	LINE/L1	(200)	6104	6042	3453832
2507	14.7	8.5	0.0	chr6	96520645	96521074	(74284905)	C	MER4A1	LTR/ERV1	(2)	470	1	3453834
22149	9.6	1.3	0.2	chr6	104670788	104677213	(66128766)	+	L1PA7	LINE/L1	8	6469	(0)	3464283
357	39.9	8.1	2.5	chr6	110819381	110819655	(59986324)	C	L2	LINE/L2	(723)	2696	2409	3474371
3230	16.0	3.5	2.6	chr6	110819659	110820224	(59985755)	+	MER41B	LTR/ERV1	1	571	(63)	3474373
1659	9.4	0.0	0.0	chr6	110953610	110953822	(59852157)	+	MER41-int	LTR/ERV1	5730	5942	(4)	3474704
4065	9.5	0.0	2.3	chr6	110953825	110954349	(59851630)	+	MER41B	LTR/ERV1	1	521	(113)	3474704
10383	3.2	1.2	12.7	chr6	111016684	111018243	(59787736)	C	SVA_C	Retroposon/SVA	(1)	1383	5	3474861
311	24.9	12.4	5.7	chr6	111018308	111018516	(59787463)	+	Tigger8	DNA/TcMar-Tigger	39	263	(404)	3474862
2453	16.4	4.5	8.9	chr6	134291282	134291778	(36514201)	+	LTR54	LTR/ERV1	5	490	(20)	3506601
250	30.3	14.4	4.2	chr6	135498782	135499022	(35306957)	+	L2a	LINE/L2	2681	2950	(469)	3508541
1332	26.8	3.7	5.6	chr6	139497021	139497518	(31308461)	+	LTR16A2	LTR/ERVL	8	495	(0)	3514781
2145	14.5	0.3	4.3	chr6	139497750	139498073	(31307906)	C	AluSz	SINE/Alu	(1)	311	1	3514782
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
3312	11.5	0.2	0.0	chr6	143064809	143065278	(27740701)	C	LTR7C	LTR/ERV1	(0)	471	1	3519342
1901	15.1	0.0	1.7	chr6	143806682	143806972	(26999007)	+	AluJr	SINE/Alu	11	296	(16)	3520447
322	34.0	0.7	5.8	chr6	144543400	144543555	(26262424)	+	L2a	LINE/L2	1107	1254	(2165)	3521564
20	34.3	0.9	3.6	chr6	144543588	144543698	(26262281)	+	(CTC)n	Simple_repeat	1	112	(0)	3521565
19	16.6	2.0	3.9	chr6	144543714	144543764	(26262215)	+	(TTCTT)n	Simple_repeat	1	52	(0)	3521566
13	8.7	4.0	0.0	chr6	144543755	144543779	(26262200)	+	(TCC)n	Simple_repeat	1	26	(0)	3521567
223	27.2	15.6	2.6	chr6	145815054	145815170	(24990809)	C	MIR3	SINE/MIR	(60)	148	14	3523215
194	27.9	4.2	8.1	chr6	146548901	146548974	(24257005)	+	L3b	LINE/CR1	5117	5187	(45)	3524179
14	14.9	5.1	2.4	chr6	146549081	146549119	(24256860)	+	(CTT)n	Simple_repeat	1	41	(0)	3524180
302	32.9	0.4	4.2	chr6	146886813	146886923	(23919056)	C	MIRc	SINE/MIR	(114)	154	41	3524636
4557	10.5	0.9	0.9	chr6	146887061	146887694	(23918285)	C	MER41B	LTR/ERV1	(0)	634	1	3524637
219	26.7	8.8	0.4	chr6	146915906	146916023	(23889956)	C	MIR1_Amn	SINE/MIR	(93)	175	47	3524669
221	29.3	9.7	2.9	chr6	147209769	147209940	(23596039)	C	L2b	LINE/L2	(270)	3117	2933	3525096
4112	9.0	0.6	0.0	chr6	147449273	147449816	(23356163)	C	MER41A	LTR/ERV1	(7)	547	1	3525419
557	25.1	15.1	0.9	chr6	149728652	149728969	(21077010)	+	L2a	LINE/L2	2881	3245	(181)	3529035
17	16.3	0.0	0.0	chr6	150005252	150005286	(20800693)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3529502
19	8.1	0.0	0.0	chr6	150168151	150168176	(20637803)	+	(T)n	Simple_repeat	1	26	(0)	3529786
914	22.1	11.5	4.5	chr6	150168193	150168254	(20637725)	C	MER63B	DNA/hAT-Blackjack	(0)	436	387	3529787
2421	3.9	1.1	0.4	chr6	150168255	150168533	(20637446)	+	AluYk3	SINE/Alu	1	281	(30)	3529788
16	31.7	0.0	1.8	chr6	151390555	151390610	(19415369)	+	GA-rich	Low_complexity	1	56	(0)	3531908
15	19.7	0.0	0.0	chr6	151390627	151390655	(19415324)	+	(GC)n	Simple_repeat	1	29	(0)	3531909
18	22.0	0.0	0.0	chr6	151390648	151390705	(19415274)	+	(AGC)n	Simple_repeat	1	58	(0)	3531910
18	6.8	0.0	5.7	chr6	151390752	151390786	(19415193)	+	(CCCTC)n	Simple_repeat	1	35	(0)	3531911
15	20.1	0.0	0.0	chr6	151390815	151390866	(19415113)	+	(GCA)n	Simple_repeat	1	52	(0)	3531912
565	21.6	5.6	0.7	chr6	158004004	158004138	(12801841)	+	LTR87	LTR/ERVL?	480	621	(3)	3541802
4781	9.6	1.6	0.2	chr6	158004149	158004773	(12801206)	+	MER41B	LTR/ERV1	1	634	(0)	3541803
261	29.6	10.0	0.0	chr6	158366276	158366383	(12439596)	C	L1MEi	LINE/L1	(1620)	592	473	3542407
2170	12.8	0.0	0.0	chr6	158762635	158762923	(12043056)	+	AluSx1	SINE/Alu	1	289	(23)	3543098
2714	13.4	3.4	2.0	chr6	158854266	158854723	(11951256)	C	MER4C	LTR/ERV1	(0)	465	1	3543241
263	25.0	18.1	0.0	chr6	158854766	158854869	(11951110)	C	MER5A1	DNA/hAT-Charlie	(33)	133	7	3543242
53	21.0	5.9	4.7	chr6	158924640	158924861	(11881118)	+	G-rich	Low_complexity	1	235	(0)	3543377
1138	15.1	13.8	0.9	chr6	161210904	161211123	(9594856)	C	LTR8	LTR/ERV1	(434)	257	5	3546335
7564	10.2	6.9	1.4	chr6	161211127	161212842	(9593137)	+	MER4-int	LTR/ERV1	2736	5141	(1457)	3546334
431	27.5	2.6	0.7	chr6	161226342	161226491	(9579488)	+	LTR65	LTR/ERV1	10	162	(507)	3546359
708	23.5	4.3	0.6	chr6	163777362	163777541	(7028438)	+	MER58A	DNA/hAT-Charlie	34	220	(4)	3549910
4256	11.2	2.5	0.3	chr6	164337813	164338432	(6467547)	+	MER41B	LTR/ERV1	1	634	(0)	3550658
541	21.6	16.0	2.5	chr6	166787124	166787365	(4018614)	+	L1ME4a	LINE/L1	5603	5883	(241)	3553631
2259	12.8	0.0	0.0	chr6	166942056	166942352	(3863627)	C	AluSz	SINE/Alu	(15)	297	1	3553793
1033	22.8	14.1	1.2	chr6	166942483	166942741	(3863238)	C	AluJo	SINE/Alu	(14)	298	1	3553794
164	23.1	2.2	0.5	chr7	1506507	1506914	(157839059)	+	(CCT)n	Simple_repeat	1	417	(0)	3559987
252	29.7	0.0	7.5	chr7	1506915	1507034	(157838939)	C	L1MA10	LINE/L1	(0)	6334	6224	3559988
18	25.1	1.4	5.3	chr7	5424138	5424160	(153921813)	+	(CCT)n	Simple_repeat	1	73	(0)	3566999
13	20.7	6.1	1.9	chr7	5424161	5424209	(153921764)	+	(CCCT)n	Simple_repeat	1	52	(0)	3567000
14	23.8	0.0	2.2	chr7	5424357	5424402	(153921571)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3567001
15	16.7	5.0	0.0	chr7	5427077	5427116	(153918857)	+	(CCCCTC)n	Simple_repeat	1	42	(0)	3567002
1717	14.2	2.4	0.0	chr7	5524473	5524761	(153821212)	C	MER1A	DNA/hAT-Charlie	(0)	529	234	3567245
2227	11.9	0.0	1.7	chr7	5524762	5525063	(153820910)	+	AluSx	SINE/Alu	2	298	(14)	3567246
1017	16.4	0.0	1.3	chr7	5525180	5525338	(153820635)	C	AluJr	SINE/Alu	(19)	293	137	3567248
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
536	12.9	5.6	9.0	chr7	14001310	14001420	(145344553)	+	LTR54	LTR/ERV1	77	183	(327)	3579468
797	23.7	1.4	0.9	chr7	14001448	14001664	(145344309)	+	LTR54	LTR/ERV1	293	510	(0)	3579468
11	27.1	3.0	4.3	chr7	16261720	16261786	(143084187)	+	(ATTTTCC)n	Simple_repeat	1	69	(0)	3582256
309	30.9	8.4	2.9	chr7	16261856	16262171	(143083802)	C	HAL1b	LINE/L1	(808)	1613	1279	3582255
2800	17.8	3.2	12.9	chr7	16419266	16420033	(142925940)	+	LTR8	LTR/ERV1	1	691	(0)	3582433
193	29.8	3.4	0.0	chr7	20219793	20219849	(139126124)	+	L2c	LINE/L2	3106	3164	(223)	3587457
700	31.9	7.2	5.6	chr7	20219895	20220355	(139125618)	+	MLT1N2	LTR/ERVL-MaLR	93	561	(1)	3587458
1729	24.6	7.9	5.2	chr7	22695050	22695667	(136650306)	C	HAL1	LINE/L1	(629)	1878	1243	3591069
1786	14.4	9.0	4.3	chr7	25834098	25834467	(133511506)	+	MLT1B	LTR/ERVL-MaLR	1	389	(1)	3595999
369	19.8	18.6	0.9	chr7	26187402	26187507	(133158466)	C	FRAM	SINE/Alu	(47)	129	1	3596577
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
1249	16.8	2.3	0.5	chr7	26233830	26234044	(133111929)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3596658
2270	11.9	0.0	0.3	chr7	26234811	26235122	(133110851)	C	AluSq2	SINE/Alu	(2)	311	1	3596659
3982	7.2	6.3	0.0	chr7	29794679	29795195	(129550778)	C	MER41A	LTR/ERV1	(2)	552	1	3602132
21	21.9	4.0	3.8	chr7	30671858	30671932	(128674041)	+	GA-rich	Low_complexity	1	75	(0)	3603458
187	28.1	3.0	0.0	chr7	30672157	30672220	(128673753)	+	L2c	LINE/L2	3095	3160	(227)	3603459
18	15.8	8.6	1.6	chr7	36153193	36153250	(123192723)	+	(GCG)n	Simple_repeat	1	63	(0)	3611822
18	29.2	1.5	1.4	chr7	36153375	36153442	(123192531)	+	(CGC)n	Simple_repeat	1	69	(0)	3611823
478	25.6	17.5	7.9	chr7	36216483	36217000	(123128973)	+	L1ME4a	LINE/L1	5534	6111	(13)	3611923
4644	10.4	1.3	0.5	chr7	36217012	36217640	(123128333)	C	MER41B	LTR/ERV1	(0)	634	1	3611924
302	32.6	5.3	1.1	chr7	37357658	37357837	(121988136)	+	L4_A_Mam	LINE/RTE-X	1701	1888	(3102)	3613618
16	10.0	0.0	0.0	chr7	38178865	38178886	(121167087)	+	(A)n	Simple_repeat	1	22	(0)	3614741
4667	4.1	0.4	0.2	chr7	38332243	38332799	(121013174)	+	LTR6B	LTR/ERV1	1	558	(0)	3614963
2064	15.6	0.9	5.2	chr7	43004120	43004559	(116341414)	C	L1MB3	LINE/L1	(0)	6183	5763	3621971
5084	6.2	2.4	0.6	chr7	44992056	44992740	(114353233)	C	SVA_B	Retroposon/SVA	(0)	1383	715	3625294
1082	28.7	8.2	8.9	chr7	48472488	48472881	(110873092)	C	LTR19C	LTR/ERV1	(0)	779	385	3629960
1683	17.5	6.6	3.7	chr7	48472882	48473232	(110872741)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	3629961
12	2.8	15.8	2.3	chr7	50336254	50336291	(109009682)	+	G-rich	Low_complexity	1	44	(0)	3632260
408	26.3	4.2	0.9	chr7	73716020	73716134	(85629839)	+	MIR3	SINE/MIR	65	183	(25)	3665287
2063	14.7	1.0	0.3	chr7	73885809	73886115	(85459858)	+	AluJr	SINE/Alu	1	309	(3)	3665709
806	19.4	2.2	5.3	chr7	73886116	73886239	(85459734)	C	MER5A	DNA/hAT-Charlie	(56)	133	6	3665708
194	22.7	0.0	4.3	chr7	73886247	73886292	(85459681)	+	UCON132b	DNA/hAT-Tip100	103	146	(2)	3665710
1097	18.8	0.5	0.0	chr7	74279824	74280025	(85065948)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	3666661
23	6.0	0.0	2.7	chr7	74280042	74280078	(85065895)	+	(CCTCC)n	Simple_repeat	1	37	(0)	3666662
22	23.2	0.0	0.0	chr7	75639245	75639290	(83706683)	+	G-rich	Low_complexity	1	46	(0)	3670120
3187	10.3	7.3	4.2	chr7	75843391	75843894	(83502079)	C	MER41C	LTR/ERV1	(0)	521	1	3670696
2584	15.2	3.2	1.4	chr7	75843895	75844028	(83501945)	C	LTR47B	LTR/ERVL	(297)	146	1	3670695
342	34.6	5.3	6.3	chr7	75991201	75991393	(83354580)	+	L2b	LINE/L2	2926	3102	(285)	3671064
4079	13.7	0.8	0.2	chr7	84821526	84822155	(74523818)	C	MER41B	LTR/ERV1	(0)	634	1	3684024
2928	17.7	0.2	6.0	chr7	84822156	84822504	(74523469)	+	L1MC3	LINE/L1	7370	7701	(84)	3684022
221	32.0	4.7	10.2	chr7	84880368	84880387	(74465586)	C	L2a	LINE/L2	(273)	3153	3138	3684103
8455	6.7	15.8	1.6	chr7	84880388	84881736	(74464237)	+	LTR12C	LTR/ERV1	3	1579	(0)	3684104
3778	9.7	2.9	0.7	chr7	84913063	84913604	(74432369)	+	MER41A	LTR/ERV1	1	554	(0)	3684141
4477	9.3	1.4	0.2	chr7	87330749	87331310	(72014663)	C	MER61E	LTR/ERV1	(0)	569	1	3687051
1673	25.2	7.0	4.2	chr7	88689978	88690875	(70655098)	+	L1MEc	LINE/L1	1485	2418	(3982)	3688859
13	24.4	4.2	0.0	chr7	92246093	92246140	(67099833)	+	G-rich	Low_complexity	1	50	(0)	3693579
1746	12.4	0.7	0.0	chr7	93148693	93148966	(66197007)	+	MLT1B	LTR/ERVL-MaLR	1	276	(114)	3694873
3988	8.3	0.2	0.0	chr7	93148971	93149490	(66196483)	+	MER41C	LTR/ERV1	1	521	(0)	3694874
4207	12.9	0.6	1.9	chr7	94157450	94158091	(65187882)	C	MER41B	LTR/ERV1	(0)	634	1	3696236
581	30.0	4.2	4.9	chr7	94158092	94158145	(65187828)	C	L2	LINE/L2	(1108)	2311	2258	3696235
13758	1.9	0.0	0.1	chr7	94158150	94160538	(65185435)	+	L1PA3	LINE/L1	3769	6155	(0)	3696237
2806	17.1	7.6	5.0	chr7	96361055	96361761	(62984212)	C	LTR8A	LTR/ERV1	(0)	727	1	3699268
81	31.2	2.1	5.0	chr7	98400244	98400714	(60945259)	+	G-rich	Low_complexity	1	481	(0)	3702486
229	15.1	0.0	0.5	chr7	100125598	100125643	(59220330)	+	AluJb	SINE/Alu	76	120	(182)	3705906
1049	16.2	16.7	1.2	chr7	100125669	100125761	(59220212)	+	AluJo	SINE/Alu	2	124	(188)	3705907
305	27.8	20.4	1.6	chr7	100189993	100190175	(59155798)	+	MIRb	SINE/MIR	20	245	(23)	3706043
19	21.9	7.3	4.2	chr7	100436191	100436300	(58909673)	+	G-rich	Low_complexity	1	118	(0)	3706570
13	26.4	3.2	3.1	chr7	101734061	101734132	(57611841)	+	(GCCCCCC)n	Simple_repeat	1	72	(0)	3709532
16	23.3	0.0	0.0	chr7	102441600	102441634	(56904339)	+	(T)n	Simple_repeat	1	35	(0)	3711016
448	23.5	1.2	0.0	chr7	102441653	102441752	(56904221)	C	MER2	DNA/TcMar-Tigger	(230)	106	1	3711017
16	9.3	0.0	0.0	chr7	103810662	103810684	(55535289)	+	(A)n	Simple_repeat	1	23	(0)	3713196
308	28.2	6.5	8.6	chr7	103996121	103996341	(55349632)	+	L1MEd	LINE/L1	90	305	(6781)	3713474
682	23.6	5.8	1.0	chr7	103996353	103996549	(55349424)	+	MER5C1	DNA/hAT-Charlie	2	208	(55)	3713475
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
221	28.0	8.8	8.1	chr7	105131303	105131438	(54214535)	C	L3	LINE/CR1	(234)	3865	3729	3715193
2756	7.5	15.7	0.7	chr7	106569510	106569937	(52776036)	+	LTR10F	LTR/ERV1	1	504	(7)	3717761
518	30.3	7.9	2.9	chr7	106655969	106656209	(52689764)	C	MIR	SINE/MIR	(1)	261	8	3717893
4320	10.9	4.0	3.0	chr7	106767153	106767852	(52578121)	C	LTR62	LTR/ERVL	(2)	707	1	3718033
296	34.9	11.4	2.7	chr7	106767859	106767985	(52577988)	C	MIRc	SINE/MIR	(20)	248	97	3718034
1528	14.5	0.4	0.0	chr7	106774310	106774544	(52571429)	C	Tigger4a	DNA/TcMar-Tigger	(0)	236	1	3718048
4321	9.3	1.3	2.8	chr7	106774627	106775270	(52570703)	C	MER41B	LTR/ERV1	(0)	634	1	3718049
4031	9.6	2.5	0.2	chr7	106796527	106796945	(52549028)	C	MER41A	LTR/ERV1	(130)	424	1	3718093
13041	9.0	2.6	0.9	chr7	106796946	106798625	(52547348)	C	MER41-int	LTR/ERV1	(2)	5944	4225	3718093
34	9.2	0.0	0.0	chr7	106813094	106813140	(52532833)	+	(TG)n	Simple_repeat	1	47	(0)	3718121
2118	13.3	0.7	0.7	chr7	106813153	106813461	(52532512)	+	AluSz	SINE/Alu	1	309	(3)	3718122
864	28.2	8.1	10.4	chr7	106986412	106987017	(52358956)	C	MLT1K	LTR/ERVL-MaLR	(2)	593	3	3718390
2378	11.0	0.3	0.0	chr7	106988855	106989162	(52356811)	C	AluSg	SINE/Alu	(1)	309	1	3718396
978	27.6	5.1	12.1	chr7	106989163	106989424	(52356549)	+	MLT1J	LTR/ERVL-MaLR	239	496	(16)	3718394
2218	10.3	5.1	0.0	chr7	107010443	107010723	(52335250)	C	AluSz	SINE/Alu	(11)	301	6	3718439
796	23.1	10.3	0.0	chr7	107035494	107035701	(52310272)	C	L2	LINE/L2	(1086)	2333	2102	3718489
562	15.8	14.9	8.1	chr7	107035702	107035887	(52310086)	C	MLT1E1A	LTR/ERVL-MaLR	(337)	343	143	3718496
11471	15.1	11.0	1.0	chr7	108210924	108213791	(51132182)	+	L1PBa	LINE/L1	6	3224	(3638)	3720238
14017	8.8	1.7	2.5	chr7	112591346	112592857	(46753116)	+	L1PA10	LINE/L1	4271	5756	(1825)	3726046
618	32.5	6.0	4.0	chr7	112592893	112592911	(46753062)	C	L1M5	LINE/L1	(2170)	3976	3959	3726043
2626	11.7	0.2	18.0	chr7	112592912	112593462	(46752511)	+	MLT2A2	LTR/ERVL	1	453	(0)	3726049
2300	12.1	0.3	1.0	chr7	116949892	116950196	(42395777)	C	AluSz	SINE/Alu	(9)	303	1	3731842
64	36.5	4.4	0.0	chr7	116950227	116950247	(42395726)	+	(CTCT)n	Simple_repeat	1	23	(0)	3731843
27	2.4	4.3	4.2	chr7	116950248	116950293	(42395680)	+	(CCTT)n	Simple_repeat	1	48	(0)	3731844
64	36.5	4.4	0.0	chr7	116950294	116950587	(42395386)	+	(CTCT)n	Simple_repeat	4	310	(0)	3731845
1563	18.0	0.4	0.8	chr7	116950702	116950946	(42395027)	C	AluJr	SINE/Alu	(58)	254	11	3731848
25	25.4	5.7	0.9	chr7	116953370	116953474	(42392499)	+	(CGGCCG)n	Simple_repeat	1	111	(0)	3731852
435	24.9	16.5	1.8	chr7	117032933	117033149	(42312824)	+	MIR	SINE/MIR	5	259	(3)	3731987
22	3.9	0.0	0.0	chr7	120950749	120950775	(38395198)	+	(T)n	Simple_repeat	1	27	(0)	3737033
4279	19.8	2.2	1.4	chr7	121038602	121039507	(38306466)	C	L1MC3	LINE/L1	(172)	7613	6701	3737147
692	25.3	10.3	6.6	chr7	121043651	121043921	(38302052)	C	MER102b	DNA/hAT-Charlie	(59)	282	1	3737153
803	33.2	4.6	3.2	chr7	121043926	121044332	(38301641)	+	Tigger12c	DNA/TcMar-Tigger	5	417	(317)	3737154
1373	30.4	4.7	1.8	chr7	121049106	121049597	(38296376)	C	LTR33	LTR/ERVL	(8)	507	1	3737163
261	31.2	4.4	4.4	chr7	121049674	121049787	(38296186)	+	L2c	LINE/L2	2974	3087	(300)	3737161
791	22.1	6.8	1.9	chr7	121049792	121049999	(38295974)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3737164
227	30.9	4.2	0.0	chr7	121081843	121081910	(38264063)	C	MIRb	SINE/MIR	(15)	253	183	3737207
303	30.5	12.3	6.6	chr7	121082572	121082799	(38263174)	C	MIRb	SINE/MIR	(19)	249	3	3737209
2074	26.6	2.6	1.9	chr7	121084191	121084808	(38261165)	C	MER20B	DNA/hAT-Charlie	(7)	776	155	3737213
25	13.3	0.0	5.4	chr7	121160203	121160258	(38185715)	+	(CATTA)n	Simple_repeat	1	56	(0)	3737319
1865	8.9	0.4	0.0	chr7	123499753	123500000	(35845973)	+	MER41A	LTR/ERV1	1	249	(305)	3740507
4081	15.5	0.2	0.9	chr7	123992703	123993160	(35352813)	C	MER41B	LTR/ERV1	(179)	455	1	3741258
3835	12.8	5.1	0.0	chr7	123996147	123996726	(35349247)	C	LTR9	LTR/ERV1	(1)	611	1	3741265
204	29.0	1.4	2.8	chr7	124406035	124406105	(34939868)	C	L2	LINE/L2	(656)	2763	2694	3741803
181	26.0	0.0	0.0	chr7	124406133	124406182	(34939791)	C	L2	LINE/L2	(834)	2585	2536	3741803
217	36.0	8.7	4.2	chr7	126701429	126701570	(32644403)	C	MER5A	DNA/hAT-Charlie	(3)	186	38	3744766
616	21.7	9.3	2.4	chr7	128237091	128237260	(31108713)	+	MLT1H2	LTR/ERVL-MaLR	60	242	(247)	3746854
398	16.5	3.2	2.1	chr7	128237307	128237399	(31108574)	+	MLT1H2	LTR/ERVL-MaLR	437	530	(19)	3746854
677	27.3	11.0	0.3	chr7	129150501	129150729	(30195244)	+	MIRb	SINE/MIR	1	257	(11)	3748600
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
2242	13.0	0.3	1.3	chr7	129880223	129880530	(29465443)	+	AluSx1	SINE/Alu	1	305	(7)	3750011
1578	17.9	7.5	4.8	chr7	129880531	129880730	(29465243)	+	MER2	DNA/TcMar-Tigger	141	344	(1)	3750010
490	25.6	7.0	7.4	chr7	132419431	132419687	(26926286)	C	MER112	DNA/hAT-Charlie	(5)	256	1	3754376
1556	21.9	3.5	0.0	chr7	132419696	132420023	(26925950)	C	MER58B	DNA/hAT-Charlie	(0)	341	2	3754377
1333	27.9	7.9	11.4	chr7	133176618	133176901	(26169072)	+	HAL1	LINE/L1	1153	1431	(1076)	3755531
10778	4.8	1.1	1.9	chr7	133176936	133178325	(26167648)	+	SVA_D	Retroposon/SVA	1	1379	(7)	3755534
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
12	20.1	2.6	2.6	chr7	135977720	135977757	(23368216)	+	(TTCC)n	Simple_repeat	1	39	(0)	3759917
12	23.1	0.0	2.6	chr7	135977742	135977779	(23368194)	+	(CCCT)n	Simple_repeat	1	38	(0)	3759918
4398	11.1	0.3	0.9	chr7	137345641	137346278	(21999695)	C	MER41B	LTR/ERV1	(0)	634	1	3761844
1138	18.6	1.4	2.3	chr7	137346279	137346338	(21999635)	+	MER20	DNA/hAT-Charlie	160	218	(1)	3761843
204	28.4	0.0	1.2	chr7	137934089	137934170	(21411803)	C	MIRc	SINE/MIR	(14)	254	174	3762620
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
2229	21.0	7.9	7.8	chr7	138667131	138667736	(20678237)	+	LTR34	LTR/ERV1	7	620	(79)	3764040
4789	11.7	1.0	1.0	chr7	138667737	138668427	(20677546)	+	LTR8	LTR/ERV1	1	691	(0)	3764041
2086	5.2	10.3	0.0	chr7	139091218	139091486	(20254487)	+	AluY	SINE/Alu	1	300	(11)	3764898
4871	2.9	0.0	0.2	chr7	139091867	139092425	(20253548)	C	LTR6B	LTR/ERV1	(0)	558	1	3764901
1715	22.8	5.4	0.2	chr7	139118775	139119192	(20226781)	+	MLT1F	LTR/ERVL-MaLR	1	441	(107)	3764957
367	23.0	16.9	0.0	chr7	139119278	139119390	(20226583)	C	MIRb	SINE/MIR	(97)	171	36	3764958
1433	25.8	3.5	1.2	chr7	142962568	142962983	(16382990)	C	MER57F	LTR/ERV1	(0)	435	10	3771213
378	35.1	11.3	3.5	chr7	143370222	143370360	(15975613)	+	L2b	LINE/L2	1858	2005	(1414)	3771820
3628	10.4	2.7	1.1	chr7	143370361	143370905	(15975068)	+	MER41A	LTR/ERV1	1	554	(0)	3771821
2074	4.2	0.0	4.6	chr7	145784671	145784929	(13561044)	+	AluY	SINE/Alu	1	247	(64)	3775075
3723	14.7	5.0	0.5	chr7	145784930	145785235	(13560738)	+	MER50B	LTR/ERV1	359	696	(1)	3775074
706	27.6	1.8	7.7	chr7	149127754	149128051	(10217922)	C	L1ME1	LINE/L1	(52)	6127	5848	3780096
1815	17.1	11.3	0.5	chr7	149128052	149128464	(10217509)	C	MER4D1	LTR/ERV1	(0)	900	389	3780097
12	20.0	0.0	0.0	chr7	149773212	149773240	(9572733)	+	(CTGA)n	Simple_repeat	1	29	(0)	3781159
254	26.0	8.3	0.0	chr7	150312680	150312756	(9033217)	+	HERVH-int	LTR/ERV1	7568	7651	(62)	3781853
3759	7.5	0.2	0.0	chr7	150312817	150313286	(9032687)	+	LTR7C	LTR/ERV1	1	471	(0)	3781854
4381	10.9	3.0	0.7	chr7	150322212	150322830	(9023143)	+	MER41B	LTR/ERV1	1	634	(0)	3781881
14	24.1	1.7	4.9	chr7	150368680	150368686	(8977287)	+	(GCGGCC)n	Simple_repeat	1	16	(45)	3781957
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
1001	12.7	22.9	1.8	chr7	150378556	150378784	(8967189)	+	AluJo	SINE/Alu	1	292	(20)	3781972
1016	18.8	0.0	2.4	chr7	150435009	150435178	(8910795)	C	FRAM	SINE/Alu	(10)	166	1	3782072
426	23.7	3.7	3.0	chr7	150435179	150435295	(8910678)	C	MER65D	LTR/ERV1	(409)	122	2	3782070
317	34.9	6.5	0.0	chr7	150958718	150958846	(8387127)	C	MIRb	SINE/MIR	(54)	214	77	3782706
627	33.5	1.6	7.0	chr7	150960123	150960290	(8385683)	+	MIR	SINE/MIR	5	172	(90)	3782707
447	8.0	2.6	3.9	chr7	150960291	150960368	(8385605)	C	L1MA5A	LINE/L1	(0)	6297	6221	3782708
466	24.7	15.7	0.0	chr7	150960522	150960687	(8385286)	+	MER5C1	DNA/hAT-Charlie	67	263	(0)	3782709
2226	12.8	0.0	0.7	chr7	150961295	150961599	(8384374)	C	AluSz	SINE/Alu	(9)	303	1	3782710
6554	9.3	4.1	2.9	chr7	151027014	151027969	(8318004)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3782808
748	27.3	8.8	2.5	chr7	151925757	151926041	(7419932)	C	L3	LINE/CR1	(1597)	2502	2198	3784260
330	28.9	4.2	8.1	chr7	151926052	151926175	(7419798)	+	MIRb	SINE/MIR	18	136	(132)	3784262
694	26.8	11.9	6.8	chr7	151926204	151926681	(7419292)	+	MLT1H1	LTR/ERVL-MaLR	51	555	(0)	3784263
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
1751	15.5	0.0	0.0	chr7	153407218	153407475	(5938498)	C	AluSz6	SINE/Alu	(53)	259	2	3786886
987	24.0	0.9	2.2	chr7	153407477	153407698	(5938275)	C	MER58A	DNA/hAT-Charlie	(5)	219	1	3786887
2050	23.2	10.1	0.2	chr7	153408696	153409197	(5936776)	+	MLT1F1	LTR/ERVL-MaLR	1	557	(12)	3786890
35319	18.8	4.1	4.9	chr7	154925107	154928743	(4417230)	C	ERV24B_Prim-int	LTR/ERV1	(1815)	3679	23	3788913
256	19.0	12.1	1.7	chr7	158696055	158696113	(649860)	C	MLT1H1	LTR/ERVL-MaLR	(15)	580	515	3793557
377	23.2	24.8	1.3	chr7	158696245	158696401	(649572)	C	MLT1H1	LTR/ERVL-MaLR	(292)	263	58	3793557
2036	19.1	14.7	0.9	chr7	158860952	158861491	(484482)	+	MER67B	LTR/ERV1	2	628	(33)	3793809
5411	7.1	10.9	1.6	chr7	158862679	158863424	(482549)	C	LTR12	LTR/ERV1	(0)	826	3	3793812
1577	15.5	3.2	3.6	chr7	158863425	158863466	(482507)	+	AluJr	SINE/Alu	238	277	(35)	3793811
1950	27.2	4.5	6.2	chr8	4665339	4666154	(140472482)	C	L1ME1	LINE/L1	(20)	6159	5366	3799648
38	28.8	2.5	3.1	chr8	6745948	6746104	(138392532)	+	(TTCT)n	Simple_repeat	1	161	(0)	3802531
261	12.8	4.7	7.5	chr8	6746119	6746186	(138392450)	C	7SLRNA	srpRNA	(275)	45	1	3802532
2234	13.5	0.3	0.0	chr8	8777339	8777649	(136360987)	C	AluSx1	SINE/Alu	(0)	312	1	3805321
1993	14.7	10.3	5.3	chr8	8777650	8777687	(136360949)	+	MSTA	LTR/ERVL-MaLR	395	427	(1)	3805320
4032	14.0	6.4	0.3	chr8	8777730	8778091	(136360545)	+	LTR62	LTR/ERVL	8	402	(307)	3805322
3222	14.8	17.1	0.3	chr8	20276169	20276886	(124861750)	+	MER21B	LTR/ERVL	1	844	(24)	3822561
4516	9.6	3.0	0.5	chr8	20276942	20277559	(124861077)	+	MER41B	LTR/ERV1	1	634	(0)	3822562
178	19.5	3.9	3.4	chr8	22599016	22599525	(122539111)	+	(CCTCT)n	Simple_repeat	1	530	(0)	3826527
14	10.6	13.2	1.7	chr8	23494338	23494390	(121644246)	+	(CAGCTGG)n	Simple_repeat	1	60	(0)	3828018
4016	13.2	3.2	0.2	chr8	29617240	29617852	(115520784)	+	MER41B	LTR/ERV1	1	632	(2)	3838219
2721	14.6	10.0	2.7	chr8	30094288	30094807	(115043829)	C	LTR6A	LTR/ERV1	(0)	564	3	3839028
1369	12.2	7.2	10.9	chr8	30094808	30095089	(115043547)	+	AluJb	SINE/Alu	27	297	(15)	3839027
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
2185	13.4	2.0	9.8	chr8	36573737	36574124	(108564512)	C	LTR18A	LTR/ERVL	(0)	357	1	3849085
548	19.6	0.0	0.0	chr8	36574192	36574293	(108564343)	C	HERVL18-int	LTR/ERVL	(0)	6047	5946	3849085
280	28.9	1.1	7.2	chr8	37673597	37673693	(107464943)	+	L2a	LINE/L2	3335	3425	(1)	3850758
4318	8.9	0.2	0.2	chr8	38071509	38072072	(107066564)	C	LTR6A	LTR/ERV1	(0)	564	1	3851587
3608	12.4	4.2	0.9	chr8	41818754	41819299	(103319337)	+	MER61E	LTR/ERV1	1	565	(4)	3857650
4245	6.1	1.8	3.4	chr8	42266541	42266989	(102871647)	+	MER41A	LTR/ERV1	1	441	(113)	3858477
329	26.4	1.9	1.9	chr8	42542202	42542309	(102596327)	+	MIRb	SINE/MIR	88	195	(73)	3858985
3654	11.8	2.5	3.0	chr8	49110428	49110995	(96027641)	+	MER61E	LTR/ERV1	1	565	(4)	3864039
12	13.7	2.0	10.0	chr8	54021999	54022047	(91116589)	+	(CGGCC)n	Simple_repeat	1	50	(0)	3870335
1434	26.9	7.4	3.8	chr8	54212355	54212914	(90925722)	+	MLT1L	LTR/ERVL-MaLR	26	607	(3)	3870709
2838	14.6	3.4	2.9	chr8	58660525	58661074	(86477562)	C	L1MB8	LINE/L1	(5)	6173	5621	3876893
1282	11.3	10.5	1.6	chr8	58661075	58661308	(86477328)	+	LTR47A	LTR/ERVL	2	259	(193)	3876894
6721	9.8	1.1	0.9	chr8	58671739	58672704	(86465932)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	3876921
1785	16.2	0.6	3.4	chr8	58672705	58672812	(86465824)	+	AluJo	SINE/Alu	210	312	(0)	3876920
993	23.0	3.2	9.7	chr8	58672818	58673261	(86465375)	+	LTR56	LTR/ERV1	53	445	(0)	3876922
1498	22.1	1.9	8.2	chr8	67366063	67366342	(77772294)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	113	3889129
4914	8.4	0.2	1.9	chr8	67366343	67366533	(77772103)	+	MER41B	LTR/ERV1	1	190	(444)	3889130
1281	20.4	3.4	0.0	chr8	79793614	79793843	(65344793)	+	Tigger7	DNA/TcMar-Tigger	4	241	(2250)	3906530
17	18.6	0.0	0.0	chr8	80171178	80171215	(64967421)	+	(CTCACA)n	Simple_repeat	1	38	(0)	3907147
520	17.5	11.7	5.5	chr8	89796704	89796869	(55341767)	+	ORSL	DNA/hAT-Tip100	62	246	(29)	3920268
4192	11.5	2.8	2.1	chr8	89796870	89797498	(55341138)	+	MER41B	LTR/ERV1	1	634	(0)	3920269
32	7.2	0.0	0.0	chr8	91040818	91040861	(54097775)	+	(GCTGCTGCC)n	Simple_repeat	1	44	(0)	3921971
25	30.0	0.0	2.1	chr8	91040900	91040992	(54097644)	+	GA-rich	Low_complexity	1	93	(0)	3921972
546	37.6	6.8	1.0	chr8	93501860	93502259	(51636377)	+	L2c	LINE/L2	1912	2336	(1083)	3925304
2811	8.4	2.9	9.6	chr8	95090634	95091110	(50047526)	+	MLT2A1	LTR/ERVL	1	444	(0)	3928168
15	31.6	0.0	1.6	chr8	95133656	95133719	(50004917)	+	G-rich	Low_complexity	1	64	(0)	3928263
18	29.8	1.8	0.0	chr8	95133723	95133779	(50004857)	+	(GC)n	Simple_repeat	1	58	(0)	3928264
2712	15.0	9.9	3.0	chr8	97762008	97762531	(47376105)	+	LTR6A	LTR/ERV1	1	564	(0)	3932377
13	0.0	5.0	0.0	chr8	97762557	97762576	(47376060)	+	(TGTT)n	Simple_repeat	1	21	(0)	3932378
197	30.1	0.8	13.4	chr8	97762621	97762638	(47375998)	+	L2c	LINE/L2	3264	3281	(106)	3932379
4178	11.7	0.3	8.7	chr8	97762639	97763208	(47375428)	+	MER41B	LTR/ERV1	1	515	(119)	3932380
2226	12.4	12.9	0.9	chr8	100501529	100501976	(44636660)	C	LTR54	LTR/ERV1	(0)	510	1	3936907
82	16.8	2.2	2.2	chr8	100501977	100502089	(44636547)	+	GA-rich	Low_complexity	66	180	(0)	3936908
398	27.2	12.8	0.0	chr8	100986269	100986459	(44152177)	C	L2a	LINE/L2	(25)	3401	3183	3937918
548	23.3	4.1	1.7	chr8	101245367	101245602	(43893034)	+	MLT1H	LTR/ERVL-MaLR	41	341	(208)	3938403
915	27.4	10.7	4.4	chr8	101245621	101246006	(43892630)	C	MER68B	LTR/ERVL	(7)	557	145	3938404
323	20.0	1.3	1.3	chr8	104666438	104666512	(40472124)	+	Charlie9	DNA/hAT-Charlie	1	75	(2682)	3944052
3666	12.9	5.5	2.8	chr8	104666513	104667104	(40471532)	C	MER50B	LTR/ERV1	(0)	697	85	3944053
40	25.2	2.0	0.0	chr8	104691858	104691958	(40446678)	+	GA-rich	Low_complexity	1	103	(0)	3944094
239	33.2	5.3	10.1	chr8	107215286	107215543	(37923093)	+	L2b	LINE/L2	3140	3384	(3)	3947645
185	24.2	12.7	0.0	chr8	107287361	107287422	(37851214)	C	X6A_LINE	LINE/CR1	(455)	625	555	3947753
2738	14.5	10.3	4.8	chr8	110894390	110894968	(34243668)	C	LTR18B	LTR/ERVL	(0)	614	1	3952802
484	24.0	13.1	11.0	chr8	115427426	115427589	(29711047)	C	MIRb	SINE/MIR	(66)	202	35	3958691
16	18.9	0.0	0.0	chr8	115451941	115451976	(29686660)	+	(CCCACT)n	Simple_repeat	1	36	(0)	3958725
28	8.6	0.0	0.0	chr8	124007265	124007302	(21131334)	+	(TC)n	Simple_repeat	1	38	(0)	3972929
3193	16.2	9.5	1.0	chr8	124448843	124449422	(20689214)	C	MER51A	LTR/ERV1	(0)	634	1	3973735
1229	22.6	8.4	11.7	chr8	124449423	124449529	(20689107)	C	MER41C	LTR/ERV1	(413)	108	2	3973734
4680	7.2	0.2	0.0	chr8	124450022	124450574	(20688062)	C	MER41A	LTR/ERV1	(0)	554	1	3973736
1222	18.3	1.4	0.0	chr8	124649095	124649307	(20489329)	+	MER58A	DNA/hAT-Charlie	1	216	(8)	3974068
290	30.6	5.0	4.1	chr8	127960208	127960333	(17178303)	C	MIR3	SINE/MIR	(52)	156	36	3980488
13	15.4	5.6	0.0	chr8	129552612	129552647	(15585989)	+	(CCAGAAT)n	Simple_repeat	1	38	(0)	3983352
182	29.6	3.6	0.0	chr8	130032489	130032542	(15106094)	C	MIRc	SINE/MIR	(181)	87	32	3984232
2557	14.4	2.7	2.5	chr8	130032606	130032655	(15105981)	+	MER65A	LTR/ERV1	1	48	(397)	3984236
2053	15.7	0.3	0.3	chr8	130032656	130032961	(15105675)	+	AluJo	SINE/Alu	1	306	(6)	3984237
821	30.4	13.9	2.4	chr8	130671760	130672150	(14466486)	C	L2a	LINE/L2	(36)	3390	2943	3985560
2568	15.1	3.5	0.2	chr8	130672151	130672568	(14466068)	+	LTR47A2	LTR/ERVL	1	432	(0)	3985561
11	3.1	14.3	2.5	chr8	133375574	133375608	(11763028)	+	(GAAGGCT)n	Simple_repeat	1	40	(0)	3990318
669	29.4	7.5	2.0	chr8	134710213	134710554	(10428082)	+	MER65D	LTR/ERV1	17	423	(50)	3992723
2051	10.5	1.4	4.9	chr8	143549032	143549176	(1589460)	C	AluSq2	SINE/Alu	(168)	145	1	4006318
405	27.5	1.3	4.5	chr8	143549177	143549228	(1589408)	+	MLT1A0	LTR/ERVL-MaLR	313	364	(1)	4006307
423	27.1	1.4	2.4	chr8	143549313	143549456	(1589180)	+	MLT1A0	LTR/ERVL-MaLR	415	564	(15)	4006307
1072	8.4	0.0	0.0	chr8	144061158	144061311	(1077325)	+	MER41A	LTR/ERV1	1	154	(400)	4007036
13	20.4	2.0	5.8	chr8	144336993	144337043	(801593)	+	G-rich	Low_complexity	1	52	(0)	4007466
16	15.8	0.0	2.7	chr8	144337107	144337143	(801493)	+	G-rich	Low_complexity	1	37	(0)	4007466
221	24.7	10.8	1.1	chr8	144901812	144901987	(236649)	+	L2a	LINE/L2	2962	3156	(270)	4008270
194	29.1	14.0	1.9	chr8	145051640	145051846	(86790)	+	L2	LINE/L2	2665	2900	(519)	4008471
13	26.4	3.2	3.1	chr9	5628961	5629022	(132765695)	+	(GCGCG)n	Simple_repeat	1	64	(0)	4016814
17	14.2	0.0	0.0	chr9	5629194	5629224	(132765493)	+	(GCC)n	Simple_repeat	1	31	(0)	4016815
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
566	15.3	3.9	0.0	chr9	37840115	37840212	(100554505)	+	Tigger3c	DNA/TcMar-Tigger	1	102	(500)	4063499
5231	10.5	6.4	1.3	chr9	37840212	37841116	(100553601)	+	Tigger3b	DNA/TcMar-Tigger	275	1228	(3)	4063500
1388	21.9	11.1	5.0	chr9	38062323	38062726	(100331991)	+	MLT1H	LTR/ERVL-MaLR	4	435	(114)	4063862
809	20.0	6.4	0.0	chr9	38062769	38062928	(100331789)	+	MER58A	DNA/hAT-Charlie	1	171	(53)	4063863
18	11.0	4.9	2.3	chr9	72365284	72365324	(66029393)	+	(CGG)n	Simple_repeat	1	43	(0)	4086364
4217	11.5	2.7	0.2	chr9	77893076	77893693	(60501024)	+	MER41B	LTR/ERV1	1	634	(0)	4094938
31	3.3	0.0	0.0	chr9	87495141	87495171	(50899546)	+	(AG)n	Simple_repeat	1	31	(0)	4109597
663	25.3	3.1	4.0	chr9	87495172	87495361	(50899356)	C	MLT1F1	LTR/ERVL-MaLR	(380)	189	1	4109596
4412	6.5	0.4	0.2	chr9	96420849	96421401	(41973316)	+	MER41A	LTR/ERV1	1	554	(0)	4122837
1329	19.0	4.5	6.1	chr9	96683365	96683723	(41710994)	C	MER65B	LTR/ERV1	(178)	353	1	4123321
636	22.3	13.3	1.9	chr9	97697592	97697797	(40696920)	+	MIRb	SINE/MIR	27	259	(9)	4124936
1632	19.7	5.5	3.0	chr9	97937377	97937703	(40457014)	+	Charlie4a	DNA/hAT-Charlie	164	503	(5)	4125446
541	27.2	3.1	0.6	chr9	97937751	97937909	(40456808)	C	L1ME4c	LINE/L1	(415)	415	253	4125445
15	25.0	1.6	4.8	chr9	97984739	97984800	(40409917)	+	(GCC)n	Simple_repeat	1	63	(0)	4125548
3430	14.2	0.6	0.2	chr9	98049370	98049871	(40344846)	C	MER41B	LTR/ERV1	(130)	504	1	4125682
2450	16.1	0.7	0.0	chr9	98049875	98050272	(40344445)	C	MER57B1	LTR/ERV1	(0)	401	1	4125683
8118	7.4	4.7	2.7	chr9	98050273	98050781	(40343936)	C	MER57-int	LTR/ERV1	(0)	7537	7007	4125683
3874	13.8	4.3	1.3	chr9	98851583	98852197	(39542520)	C	MER41B	LTR/ERV1	(0)	634	1	4127345
484	28.4	1.3	0.6	chr9	98852198	98852237	(39542480)	+	MIRb	SINE/MIR	226	264	(4)	4127344
500	31.1	2.8	4.6	chr9	99059244	99059462	(39335255)	C	MIRb	SINE/MIR	(51)	217	3	4127768
392	22.8	4.2	7.3	chr9	99059547	99059669	(39335048)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	477	4127769
2449	9.5	0.0	0.0	chr9	99073691	99073995	(39320722)	C	AluSc	SINE/Alu	(2)	307	3	4127793
3022	15.0	5.1	9.2	chr9	99073996	99074523	(39320194)	+	LTR9	LTR/ERV1	95	612	(0)	4127792
5070	8.3	1.7	0.2	chr9	99301912	99302535	(39092182)	+	MER41B	LTR/ERV1	1	634	(0)	4128193
493	29.3	7.9	4.3	chr9	104745711	104745942	(33648775)	+	MLT1J2	LTR/ERVL-MaLR	208	448	(0)	4136195
484	28.7	7.8	6.1	chr9	104745947	104746224	(33648493)	+	HAL1	LINE/L1	549	831	(1676)	4136196
15	11.7	0.0	0.0	chr9	104747886	104747913	(33646804)	+	(GAGGG)n	Simple_repeat	1	28	(0)	4136198
4578	9.2	3.6	0.2	chr9	107675390	107675999	(30718718)	C	MER41B	LTR/ERV1	(0)	634	3	4141340
549	25.8	13.2	4.3	chr9	107676000	107676185	(30718532)	C	MIR	SINE/MIR	(49)	213	1	4141339
699	33.4	7.9	5.4	chr9	110371462	110371977	(28022740)	+	L2	LINE/L2	2330	2859	(560)	4146188
1187	23.5	12.6	0.0	chr9	112226589	112226886	(26167831)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	4149413
1158	18.4	9.0	2.3	chr9	113345533	113345962	(25048755)	C	LTR54	LTR/ERV1	(5)	505	4	4151469
4193	11.2	2.8	3.0	chr9	114557588	114557916	(23836801)	C	MER41B	LTR/ERV1	(290)	344	1	4153921
1994	19.3	4.4	6.4	chr9	114557917	114558081	(23836636)	C	Tigger9b	DNA/TcMar-Tigger	(315)	309	149	4153918
222	27.0	6.3	7.5	chr9	116465108	116465187	(21929530)	C	MIRb	SINE/MIR	(188)	80	2	4157442
12	20.8	0.0	2.9	chr9	116465597	116465631	(21929086)	+	(AAT)n	Simple_repeat	1	35	(0)	4157443
265	18.5	7.1	4.4	chr9	121202235	121202302	(17192415)	C	MIRb	SINE/MIR	(11)	257	188	4166478
381	23.2	1.2	0.0	chr9	121202366	121202465	(17192252)	C	MIRc	SINE/MIR	(87)	181	73	4166478
683	27.8	14.2	3.8	chr9	121218651	121218912	(17175805)	C	MER65D	LTR/ERV1	(157)	316	1	4166523
253	24.1	0.0	1.8	chr9	121218913	121218967	(17175750)	+	MIRb	SINE/MIR	123	176	(92)	4166525
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
484	36.0	4.3	3.8	chr9	124110555	124110664	(14284053)	C	MIRb	SINE/MIR	(14)	254	145	4171951
1767	15.2	5.8	4.1	chr9	125284633	125284974	(13109743)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	4174355
1056	23.4	0.5	3.9	chr9	125285056	125285286	(13109431)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	4174356
511	18.1	6.9	5.5	chr9	127509332	127509530	(10885187)	+	MIR3	SINE/MIR	11	206	(2)	4178368
8063	6.3	0.4	0.1	chr9	128279220	128280182	(10114535)	C	LTR13A	LTR/ERVK	(0)	966	1	4180126
317	26.0	7.7	1.0	chr9	128688587	128688683	(9706034)	C	MIR3	SINE/MIR	(57)	151	48	4181102
212	34.1	3.6	4.3	chr9	129139771	129139911	(9254806)	+	MIR3	SINE/MIR	1	140	(68)	4182167
345	28.8	3.7	2.4	chr9	129487829	129487963	(8906754)	+	MIR1_Amn	SINE/MIR	3	151	(79)	4182949
21	14.1	3.3	4.8	chr9	129488103	129488162	(8906555)	+	(CACACT)n	Simple_repeat	1	62	(0)	4182950
310	31.4	6.3	0.8	chr9	129737623	129737683	(8657034)	+	MIRb	SINE/MIR	188	250	(18)	4183515
499	34.2	1.1	2.1	chr9	129863365	129863555	(8531162)	C	MIRb	SINE/MIR	(19)	249	61	4183807
2258	11.2	0.0	0.0	chr9	129882789	129883083	(8511634)	C	AluSz	SINE/Alu	(17)	295	1	4183832
2902	16.9	5.6	1.5	chr9	129883084	129883155	(8511562)	C	MER41D	LTR/ERV1	(482)	75	5	4183831
4209	8.1	1.3	1.1	chr9	130150673	130151060	(8243657)	C	MER41A	LTR/ERV1	(166)	388	2	4184412
200	17.8	1.2	0.0	chr9	132878628	132878677	(5516040)	+	MIR1_Amn	SINE/MIR	110	161	(47)	4189658
13	13.0	0.0	3.6	chr9	132984336	132984363	(5410354)	+	GA-rich	Low_complexity	1	28	(0)	4189858
194	31.6	1.2	1.2	chr9	132984414	132984493	(5410224)	C	MIR3	SINE/MIR	(3)	205	126	4189859
54	15.1	1.0	1.0	chr9	132999464	132999560	(5395157)	+	GA-rich	Low_complexity	1	98	(0)	4189890
619	30.6	4.3	3.2	chr9	136237967	136238219	(2156498)	C	LTR37B	LTR/ERV1	(212)	256	1	4194178
15	13.2	6.8	2.1	chr9	136363715	136363758	(2030959)	+	(CCCGC)n	Simple_repeat	1	47	(0)	4194303
6413	12.8	3.0	0.7	chr9	136788798	136789776	(1604941)	C	LTR5B	LTR/ERVK	(0)	1002	1	4194804
2381	8.5	0.0	0.0	chr9	136789887	136790180	(1604537)	C	AluSg4	SINE/Alu	(16)	294	1	4194808
3968	10.7	2.0	0.0	chr9	137075103	137075645	(1319072)	+	MER41A	LTR/ERV1	1	554	(0)	4195198
2273	8.9	1.3	2.2	chr9	137085364	137085676	(1309041)	C	AluSx1	SINE/Alu	(2)	310	1	4195208
226	12.5	9.4	0.0	chr9	137085679	137085726	(1308991)	C	MER65D	LTR/ERV1	(135)	338	286	4195209
27	17.2	4.6	4.4	chr9	137227882	137227981	(1166736)	+	G-rich	Low_complexity	1	100	(0)	4195368
21	17.2	10.0	1.1	chr9	137300760	137300839	(1093878)	+	G-rich	Low_complexity	1	88	(0)	4195477
46	16.7	2.1	0.0	chr9	137411682	137411775	(982942)	+	G-rich	Low_complexity	1	96	(0)	4195605
1566	17.6	3.8	1.4	chrX	990176	990498	(155050397)	+	LTR9	LTR/ERV1	174	524	(120)	4359833
23	15.3	0.0	0.0	chrX	990505	990549	(155050346)	+	(CTCCCT)n	Simple_repeat	1	45	(0)	4359834
40	0.0	0.0	0.0	chrX	990551	990584	(155050311)	+	(TC)n	Simple_repeat	1	34	(0)	4359835
2170	20.6	6.6	4.4	chrX	2502800	2503215	(153537680)	+	MER41D	LTR/ERV1	1	428	(129)	4362999
4513	11.3	0.9	0.2	chrX	3570811	3571438	(152469457)	+	MER41B	LTR/ERV1	2	634	(0)	4365106
4211	10.3	0.0	0.0	chrX	3701577	3702130	(152338765)	+	MER41A	LTR/ERV1	1	554	(0)	4365397
3677	12.3	0.3	3.4	chrX	15883108	15883485	(140157410)	C	MER41B	LTR/ERV1	(271)	363	1	4385119
1317	20.1	11.0	6.3	chrX	15883558	15883999	(140156896)	+	LTR29	LTR/ERV1	158	622	(0)	4385121
791	28.9	6.4	3.3	chrX	16771508	16771808	(139269087)	+	AluJb	SINE/Alu	2	312	(0)	4386663
1308	23.8	5.2	9.2	chrX	35670582	35671103	(120369792)	C	LTR35B	LTR/ERV1	(0)	605	106	4415415
2646	14.4	4.6	3.1	chrX	35671254	35671375	(120369520)	C	L1PA16	LINE/L1	(2)	6164	6045	4415416
4502	9.4	3.1	0.2	chrX	40571136	40571750	(115469145)	C	MER41B	LTR/ERV1	(0)	634	1	4422746
27	8.2	0.0	0.0	chrX	40571843	40571881	(115469014)	+	(ATTC)n	Simple_repeat	1	39	(0)	4422747
5037	8.9	1.1	3.1	chrX	44483626	44484167	(111556728)	C	LTR8	LTR/ERV1	(155)	536	1	4428961
403	27.0	1.0	0.0	chrX	63434863	63434962	(92605933)	C	LTR46	LTR/ERV1	(359)	101	1	4450156
280	29.4	5.0	0.6	chrX	63434965	63435135	(92605760)	+	L1ME3C	LINE/L1	5838	6016	(107)	4450157
356	28.7	4.6	0.5	chrX	63435136	63435324	(92605571)	+	L1ME3Cz	LINE/L1	794	990	(7)	4450158
17	19.2	0.0	0.0	chrX	64205654	64205689	(91835206)	+	(CGC)n	Simple_repeat	1	36	(0)	4451082
788	19.4	7.0	7.0	chrX	103098300	103098543	(52942352)	C	LTR23-int	LTR/ERV1	(3927)	2260	2017	4498052
3110	18.2	3.7	12.3	chrX	103098747	103099552	(52941343)	C	MER50	LTR/ERV1	(0)	734	1	4498056
64	1.7	0.0	0.0	chrX	107742261	107742319	(48298576)	+	(GA)n	Simple_repeat	1	59	(0)	4504742
28	19.5	1.6	0.0	chrX	107742346	107742406	(48298489)	+	G-rich	Low_complexity	1	62	(0)	4504743
4126	9.9	5.8	1.3	chrX	110000728	110001332	(46039563)	C	MER41B	LTR/ERV1	(0)	634	1	4507751
11	6.9	2.6	10.3	chrX	118565923	118565960	(37474935)	+	A-rich	Low_complexity	1	39	(0)	4519491
12	23.9	0.0	2.4	chrX	120561001	120561041	(35479854)	+	G-rich	Low_complexity	1	41	(0)	4523167
13	18.2	0.0	0.0	chrX	120561247	120561277	(35479618)	+	(CGCTCC)n	Simple_repeat	1	31	(0)	4523168
1020	21.2	4.4	1.8	chrX	153897815	153898135	(2142760)	C	MLT1G1	LTR/ERVL-MaLR	(302)	289	1	4570906
3294	23.8	12.7	1.7	chrX	153898137	153899030	(2141865)	+	L1MCc	LINE/L1	2962	3878	(3063)	4570905
11	21.2	0.0	2.9	chrX	154097219	154097253	(1943642)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	4571249