3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
251	27.1	10.7	0.8	chr1	3857974	3858107	(245098315)	+	MIR3	SINE/MIR	37	185	(23)	4462
1851	13.9	5.5	4.5	chr1	6088547	6088682	(242867740)	C	AluJo	SINE/Alu	(181)	131	1	7663
31	0.0	0.0	0.0	chr1	6088704	6088732	(242867690)	+	(AAT)n	Simple_repeat	1	29	(0)	7665
13	4.2	8.0	0.0	chr1	6236099	6236123	(242720299)	+	(CCCG)n	Simple_repeat	1	27	(0)	7886
333	30.0	8.9	0.8	chr1	9520553	9520801	(239435621)	+	LTR16C	LTR/ERVL	182	452	(37)	13785
321	28.5	11.9	6.1	chr1	10551669	10551820	(238404602)	+	Tigger19a	DNA/TcMar-Tigger	31	195	(128)	16014
13	16.9	0.0	0.0	chr1	16352430	16352456	(232603966)	+	(CGC)n	Simple_repeat	1	27	(0)	27273
17	23.9	3.1	4.5	chr1	16352475	16352538	(232603884)	+	(GC)n	Simple_repeat	1	66	(0)	27274
4643	23.1	3.6	2.8	chr1	22307929	22309252	(226647170)	+	L1ME1	LINE/L1	4239	5573	(746)	39857
395	26.6	0.0	0.0	chr1	23772400	23772478	(225183944)	C	Tigger5b	DNA/TcMar-Tigger	(393)	79	1	43327
1148	11.6	7.0	2.5	chr1	23772478	23772681	(225183741)	C	Tigger7	DNA/TcMar-Tigger	(2)	2489	2276	43328
3191	14.7	11.7	4.5	chr1	23936525	23937195	(225019227)	+	LTR8A	LTR/ERV1	2	727	(0)	43760
343	18.3	0.0	0.0	chr1	23937198	23937257	(225019165)	C	MER21-int	LTR/ERVL	(2529)	1662	1603	43755
1981	8.6	0.7	6.1	chr1	23937258	23937568	(225018854)	C	MER11A	LTR/ERVK	(0)	1266	973	43761
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
12	27.7	3.1	3.0	chr1	25859514	25859535	(223096887)	+	(CCGCC)n	Simple_repeat	1	66	(0)	47961
2139	10.2	4.0	0.3	chr1	28724389	28724681	(220231741)	C	AluSx3	SINE/Alu	(7)	304	1	54989
2014	11.2	1.4	2.7	chr1	28724684	28724979	(220231443)	C	AluSq2	SINE/Alu	(21)	292	1	54990
506	28.3	9.3	8.6	chr1	28724980	28725205	(220231217)	+	L2a	LINE/L2	3094	3332	(94)	54988
19	20.8	0.0	6.3	chr1	29181798	29181860	(219774562)	+	(GGC)n	Simple_repeat	1	63	(0)	56088
252	27.1	7.9	3.7	chr1	30385110	30385243	(218571179)	+	MER5A	DNA/hAT-Charlie	50	189	(0)	58330
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
808	29.0	2.1	3.8	chr1	31711894	31712133	(217244289)	+	MIRb	SINE/MIR	9	244	(24)	61193
199	31.9	8.4	4.1	chr1	31712362	31712508	(217243914)	+	L2c	LINE/L2	3233	3386	(1)	61194
2428	8.0	0.3	0.0	chr1	32439102	32439401	(216517021)	C	AluSp	SINE/Alu	(10)	303	3	62841
741	22.1	14.2	1.9	chr1	32439402	32439558	(216516864)	+	MLT2B1	LTR/ERVL	247	430	(90)	62836
3937	16.1	6.2	1.4	chr1	32439559	32440250	(216516172)	C	LTR8A	LTR/ERV1	(0)	727	1	62842
266	34.8	12.8	6.8	chr1	32712077	32712181	(216244241)	+	MIRb	SINE/MIR	130	254	(14)	63554
241	24.2	14.9	10.8	chr1	32712574	32712698	(216243724)	+	MIRb	SINE/MIR	3	135	(133)	63557
13	11.6	12.2	1.8	chr1	35883203	35883251	(213073171)	+	(CTGGCAG)n	Simple_repeat	1	55	(0)	69699
21	12.9	2.3	2.2	chr1	35883255	35883298	(213073124)	+	(GCG)n	Simple_repeat	1	45	(0)	69700
208	20.2	3.3	1.1	chr1	37177330	37177415	(211779007)	C	L2a	LINE/L2	(317)	3109	3021	72251
17	22.0	0.0	0.0	chr1	39081427	39081468	(209874954)	+	(CCGCT)n	Simple_repeat	1	42	(0)	76043
13	14.7	3.3	0.0	chr1	39081480	39081509	(209874913)	+	(CGC)n	Simple_repeat	1	31	(0)	76044
382	29.6	6.3	6.8	chr1	40533256	40533624	(208422798)	C	L4_B_Mam	LINE/RTE-X	(104)	4837	4471	79005
833	27.9	8.9	8.9	chr1	40533707	40533820	(208422602)	C	L1M5	LINE/L1	(1436)	4710	4605	79006
17	3.9	3.7	0.0	chr1	40785047	40785073	(208171349)	+	(GCCCT)n	Simple_repeat	1	28	(0)	79498
2621	20.6	8.1	2.6	chr1	42256086	42256989	(206699433)	+	L1ME2	LINE/L1	4968	5935	(229)	82174
15	21.2	0.0	2.5	chr1	44355120	44355159	(204601263)	+	(GGC)n	Simple_repeat	1	40	(0)	85869
12	11.5	3.3	3.2	chr1	44417620	44417649	(204538773)	+	(CCTC)n	Simple_repeat	1	31	(0)	85980
14	19.7	4.2	2.0	chr1	44417992	44418039	(204538383)	+	(CGCCC)n	Simple_repeat	1	50	(0)	85981
281	19.1	0.0	0.0	chr1	46340363	46340409	(202616013)	C	Arthur1C	DNA/hAT-Tip100	(316)	47	1	89843
294	31.4	12.4	5.5	chr1	46340413	46340614	(202615808)	+	L2b	LINE/L2	3009	3226	(149)	89844
12	17.6	8.9	0.0	chr1	46341238	46341282	(202615140)	+	(CCCTTT)n	Simple_repeat	1	49	(0)	89845
14	13.1	0.0	0.0	chr1	50960185	50960210	(197996212)	+	(CGAG)n	Simple_repeat	1	26	(0)	97705
20	25.0	0.0	0.0	chr1	50960209	50960260	(197996162)	+	(CGC)n	Simple_repeat	1	52	(0)	97706
182	31.8	1.6	0.0	chr1	51264444	51264506	(197691916)	C	MIR3	SINE/MIR	(11)	197	134	98325
2203	8.9	0.7	2.6	chr1	51297216	51297518	(197658904)	C	AluSz	SINE/Alu	(15)	297	1	98386
1922	18.8	6.3	1.0	chr1	53407571	53407973	(195548449)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	103051
271	30.7	4.1	3.5	chr1	55153118	55153286	(193803136)	+	Charlie30a	DNA/hAT-Charlie	67	236	(555)	106546
2791	8.6	0.3	1.3	chr1	55619421	55619799	(193336623)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	107427
6512	11.9	5.7	0.8	chr1	55619800	55621182	(193335240)	+	THE1C-int	LTR/ERVL-MaLR	1	1453	(127)	107427
520	36.8	6.8	5.4	chr1	55968638	55968970	(192987452)	+	L2b	LINE/L2	3038	3375	(0)	107958
356	31.4	9.3	0.0	chr1	55968980	55969137	(192987285)	C	ERVL-B4-int	LTR/ERVL	(4224)	1533	1351	107959
27	0.0	0.0	0.0	chr1	57424334	57424359	(191532063)	+	(CGAG)n	Simple_repeat	1	26	(0)	110787
14	15.4	9.8	3.0	chr1	57620695	57620755	(191335667)	+	(AGCAGAG)n	Simple_repeat	1	67	(0)	111186
12	0.0	0.0	5.0	chr1	57620748	57620767	(191335655)	+	(AGG)n	Simple_repeat	1	20	(0)	111187
13	22.5	2.8	6.8	chr1	57620756	57620765	(191335657)	+	(AGCAGG)n	Simple_repeat	1	73	(0)	111188
10729	10.4	3.1	1.7	chr1	57840861	57842468	(191113954)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	111623
266	32.1	0.9	2.6	chr1	58776851	58776965	(190179457)	+	L2c	LINE/L2	3253	3365	(22)	113498
1104	18.1	0.0	0.0	chr1	62066388	62066547	(186889875)	C	AluJb	SINE/Alu	(16)	296	137	119412
3684	15.4	11.9	2.8	chr1	62066645	62067116	(186889306)	C	LTR8B	LTR/ERV1	(17)	803	249	119413
17	17.4	2.5	0.0	chr1	64470366	64470405	(184486017)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	123959
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
1564	27.3	7.6	5.2	chr1	65074857	65075510	(183880912)	C	L2	LINE/L2	(1675)	1744	1074	125037
336	27.7	5.1	3.7	chr1	65075673	65075807	(183880615)	+	L2a	LINE/L2	3289	3425	(1)	125030
2179	14.2	1.1	0.6	chr1	68741861	68742213	(180214209)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	131085
11134	10.6	2.1	0.1	chr1	68742214	68743756	(180212666)	+	THE1A-int	LTR/ERVL-MaLR	1	1575	(5)	131085
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
2551	10.2	0.8	3.9	chr1	73557421	73557807	(175398615)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	137532
10235	12.6	3.0	0.8	chr1	73557808	73559339	(175397083)	+	THE1C-int	LTR/ERVL-MaLR	1	1567	(13)	137532
4291	15.7	8.1	0.4	chr1	73877944	73878700	(175077722)	+	LTR8B	LTR/ERV1	1	820	(0)	137932
9364	19.4	6.6	2.9	chr1	74164575	74166780	(174789642)	C	L1MD1	LINE/L1	(907)	5630	3287	138299
332	33.8	4.0	2.3	chr1	74933513	74933733	(174022689)	+	L1MC1	LINE/L1	273	497	(2010)	139320
636	29.0	6.5	8.8	chr1	74933736	74934408	(174022014)	+	L1MC1	LINE/L1	1742	2398	(109)	139320
74	19.2	0.0	0.0	chr1	75543576	75543711	(173412711)	+	(TA)n	Simple_repeat	1	136	(0)	140072
8691	12.2	5.2	0.9	chr1	75646504	75648006	(173308416)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	140235
1944	15.0	3.3	7.5	chr1	76699713	76699753	(172256669)	+	L1MA8	LINE/L1	6038	6073	(218)	141810
5636	22.6	6.8	4.2	chr1	77330144	77331943	(171624479)	C	L1MEg	LINE/L1	(899)	5247	3399	142693
675	18.8	3.2	6.9	chr1	77533536	77533633	(171422789)	C	MER5A1	DNA/hAT-Charlie	(56)	110	9	143052
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
692	25.8	16.3	3.8	chr1	77683874	77684215	(171272207)	+	L2a	LINE/L2	3013	3405	(21)	143295
3558	17.0	5.5	4.7	chr1	78505529	78506342	(170450080)	C	L1MB5	LINE/L1	(8)	6166	5346	144686
743	27.6	5.4	11.0	chr1	78643356	78643875	(170312547)	C	LTR26	LTR/ERV1	(0)	603	96	144847
9436	7.7	11.4	2.2	chr1	80052604	80054032	(168902390)	C	LTR12C	LTR/ERV1	(0)	1579	3	146673
324	20.3	0.0	7.8	chr1	80054033	80054080	(168902342)	+	HERVL18-int	LTR/ERVL	5224	5267	(780)	146672
250	17.8	0.0	0.0	chr1	80054081	80054125	(168902297)	+	HERVL18-int	LTR/ERVL	5946	5990	(57)	146672
2237	14.6	2.2	0.6	chr1	80054238	80054588	(168901834)	+	LTR18A	LTR/ERVL	1	357	(0)	146674
20	0.0	0.0	0.0	chr1	80210317	80210338	(168746084)	+	(T)n	Simple_repeat	1	22	(0)	146868
248	38.0	4.7	3.2	chr1	81377259	81377383	(167579039)	+	MIRb	SINE/MIR	141	267	(1)	148367
37	15.9	0.0	0.0	chr1	84078068	84078133	(164878289)	+	(CCG)n	Simple_repeat	1	66	(0)	152037
20	15.7	7.9	3.7	chr1	84505927	84506006	(164450416)	+	(CCCG)n	Simple_repeat	1	83	(0)	152615
22	14.0	2.0	2.0	chr1	84997144	84997198	(163959224)	+	(CGCCC)n	Simple_repeat	1	55	(0)	153435
274	25.2	11.2	5.2	chr1	85062535	85062668	(163893754)	C	L2a	LINE/L2	(0)	3426	3284	153532
19	14.2	0.0	0.0	chr1	85576609	85576639	(163379783)	+	(CA)n	Simple_repeat	1	31	(0)	154398
23	11.1	0.0	0.0	chr1	85576952	85576990	(163379432)	+	(ACCGCC)n	Simple_repeat	1	39	(0)	154399
16	18.3	3.8	3.6	chr1	85577104	85577156	(163379266)	+	G-rich	Low_complexity	1	55	(0)	154400
7358	17.6	6.6	1.0	chr1	89887995	89889587	(159066835)	+	L1MC3	LINE/L1	6071	7785	(0)	160494
13	22.2	4.3	5.5	chr1	92486477	92486546	(156469876)	+	(CGCCC)n	Simple_repeat	1	73	(0)	164561
972	12.1	0.0	1.4	chr1	93181035	93181174	(155775248)	+	FLAM_C	SINE/Alu	1	138	(5)	165856
11129	16.1	3.2	4.1	chr1	93955287	93957123	(154999299)	C	L1MA4A	LINE/L1	(4196)	3370	1544	167072
32	20.3	0.0	0.0	chr1	98046174	98046239	(150910183)	+	(GCTGCC)n	Simple_repeat	1	66	(0)	172869
575	30.3	8.3	1.7	chr1	99267855	99268089	(149688333)	C	MIRb	SINE/MIR	(0)	268	17	174617
2100	29.1	9.4	7.5	chr1	99627129	99627661	(149328761)	C	L2a	LINE/L2	(2016)	1403	908	175097
5911	8.8	3.4	0.2	chr1	100043580	100044511	(148911911)	C	L1PB2	LINE/L1	(6)	6145	4859	175854
2323	22.0	3.5	8.1	chr1	101338527	101339264	(147617158)	+	LTR8	LTR/ERV1	1	691	(0)	177903
570	12.2	5.3	0.0	chr1	101339265	101339354	(147617068)	+	ERVL-B4-int	LTR/ERVL	2840	2934	(2780)	177902
2316	12.1	2.9	1.6	chr1	101867784	101868153	(147088269)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	178602
9093	13.8	9.4	0.3	chr1	101868156	101869634	(147086788)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	178603
25	24.6	0.0	0.0	chr1	101996930	101996989	(146959433)	+	(AGC)n	Simple_repeat	1	60	(0)	178764
1679	18.5	3.2	0.7	chr1	103275283	103275584	(145680838)	C	AluJb	SINE/Alu	(1)	311	2	180287
553	22.5	4.2	1.3	chr1	105116951	105117107	(143839315)	+	MER3	DNA/hAT-Charlie	1	163	(46)	182456
3386	19.1	1.5	7.5	chr1	105117110	105117739	(143838683)	+	L1PBa1	LINE/L1	836	1412	(5200)	182457
8030	16.2	4.7	1.0	chr1	105981393	105982808	(142973614)	+	THE1C-int	LTR/ERVL-MaLR	95	1565	(15)	183482
4872	15.2	2.3	0.2	chr1	106798904	106799706	(142156716)	C	LTR8B	LTR/ERV1	(0)	820	1	184511
1080	19.1	1.9	3.5	chr1	106924175	106924434	(142031988)	C	MER97a	DNA/hAT-Tip100	(127)	763	508	184672
634	18.0	12.9	0.8	chr1	106924846	106924974	(142031448)	C	MER5A1	DNA/hAT-Charlie	(3)	163	17	184673
12	12.6	3.7	0.0	chr1	107056667	107056693	(141899729)	+	(CCGCG)n	Simple_repeat	1	28	(0)	184892
2306	11.1	0.0	0.0	chr1	107740005	107740301	(141216121)	+	AluSx	SINE/Alu	1	297	(15)	185837
238	28.7	13.0	0.0	chr1	108011365	108011451	(140944971)	+	L4_C_Mam	LINE/RTE-X	6	105	(5033)	186218
272	25.4	1.4	0.0	chr1	108011607	108011677	(140944745)	+	L4_C_Mam	LINE/RTE-X	139	210	(4928)	186218
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
46	20.3	0.8	3.3	chr1	109042229	109042348	(139914074)	+	(GGCGG)n	Simple_repeat	1	121	(0)	187838
721	15.2	6.0	0.0	chr1	109220027	109220184	(139736238)	C	L1MA7	LINE/L1	(0)	6291	6124	188253
3879	20.6	4.6	6.2	chr1	109220185	109220963	(139735459)	C	L1ME3	LINE/L1	(477)	5685	4920	188249
24	17.7	0.0	0.0	chr1	109250115	109250161	(139706261)	+	(GCT)n	Simple_repeat	1	47	(0)	188307
13	13.1	0.0	0.0	chr1	110674560	110674584	(138281838)	+	(CGC)n	Simple_repeat	1	25	(0)	190556
13	25.9	0.0	8.6	chr1	110674722	110674802	(138281620)	+	G-rich	Low_complexity	1	81	(0)	190557
1285	19.8	0.0	0.0	chr1	110954297	110954498	(138001924)	C	AluJb	SINE/Alu	(28)	284	83	190933
354	28.9	7.7	6.2	chr1	111739965	111740156	(137216266)	C	L2a	LINE/L2	(26)	3400	3206	191993
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
2437	7.8	1.3	0.0	chr1	114780959	114781265	(134175157)	C	AluSz	SINE/Alu	(1)	311	1	197271
12	28.0	2.3	0.0	chr1	116373364	116373407	(132583015)	+	(CCTC)n	Simple_repeat	1	45	(0)	199614
11077	11.6	3.4	0.1	chr1	119700939	119702512	(129253910)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	204418
1576	29.0	4.6	8.7	chr1	125065146	125065994	(123890428)	C	SST1	Satellite/centr	(524)	1039	224	207371
43	0.0	2.3	0.0	chr1	125066151	125066193	(123890229)	+	(TTTA)n	Simple_repeat	1	44	(0)	207374
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
642	18.1	19.5	15.4	chr1	144413100	144413392	(104543030)	C	AluSz	SINE/Alu	(0)	312	5	209363
11825	9.4	0.9	0.1	chr1	145760734	145762300	(103194122)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	211476
2405	9.7	0.0	0.0	chr1	145968571	145968870	(102987552)	C	AluSx3	SINE/Alu	(11)	300	1	211843
13	17.2	3.9	5.7	chr1	147523504	147523554	(101432868)	+	G-rich	Low_complexity	1	53	(0)	214218
24	27.8	3.6	2.6	chr1	147541889	147542004	(101414418)	+	G-rich	Low_complexity	1	117	(0)	214261
16	26.8	0.0	0.0	chr1	147542131	147542170	(101414252)	+	(TG)n	Simple_repeat	1	40	(0)	214262
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
281	21.9	0.0	0.0	chr1	148381889	148381952	(100574470)	C	MER4-int	LTR/ERV1	(5433)	1165	1102	215609
1543	16.7	0.0	0.0	chr1	148382188	148382420	(100574002)	C	AluSz	SINE/Alu	(79)	233	1	215610
789	23.8	6.2	1.3	chr1	151534457	151534689	(97421733)	C	MIR	SINE/MIR	(0)	268	2	221429
1228	13.3	0.0	0.0	chr1	152065439	152065603	(96890819)	C	AluJo	SINE/Alu	(11)	301	137	222344
527	31.5	8.0	6.7	chr1	152065604	152066046	(96890376)	+	L2b	LINE/L2	2731	3164	(211)	222341
230	18.2	0.0	0.0	chr1	153568410	153568453	(95387969)	+	MIR3	SINE/MIR	67	110	(98)	224297
12	8.4	0.0	6.9	chr1	153728480	153728508	(95227914)	+	GA-rich	Low_complexity	1	29	(0)	224670
18	34.4	0.0	0.0	chr1	153728659	153728731	(95227691)	+	(GCA)n	Simple_repeat	1	73	(0)	224671
13	13.1	0.0	0.0	chr1	153922689	153922713	(95033709)	+	(CGGG)n	Simple_repeat	1	25	(0)	225074
14	15.6	5.6	0.0	chr1	153922834	153922892	(95033530)	+	G-rich	Low_complexity	1	62	(0)	225075
23	15.5	0.0	0.0	chr1	153922913	153922955	(95033467)	+	(CGG)n	Simple_repeat	1	43	(0)	225076
21	25.1	1.6	0.0	chr1	153946317	153946377	(95010045)	+	(GGCG)n	Simple_repeat	1	62	(0)	225116
12	17.9	5.0	2.4	chr1	153946514	153946553	(95009869)	+	(CGCTG)n	Simple_repeat	1	42	(0)	225117
2392	5.6	0.3	0.3	chr1	155194029	155194314	(93762108)	+	AluSg4	SINE/Alu	6	291	(19)	227524
14	27.2	1.6	3.2	chr1	155277400	155277462	(93678960)	+	(CCGC)n	Simple_repeat	1	61	(0)	227659
1103	13.4	4.1	0.0	chr1	156213467	156213630	(92742792)	C	AluJb	SINE/Alu	(7)	305	135	229708
13	32.7	0.0	0.0	chr1	157074571	157074623	(91881799)	+	(GCTCCA)n	Simple_repeat	1	53	(0)	231217
1611	28.2	13.8	8.4	chr1	158148329	158148894	(90807528)	+	LTR78B	LTR/ERV1	707	1296	(0)	232748
232	30.4	4.7	4.7	chr1	161389531	161389637	(87566785)	C	MER103C	DNA/hAT-Charlie	(123)	174	68	237440
13	17.2	4.9	2.3	chr1	161389847	161389887	(87566535)	+	(CTCCG)n	Simple_repeat	1	43	(0)	237441
645	1.4	0.0	0.0	chr1	161540241	161540314	(87416108)	+	tRNA-Asn-AAC	tRNA	1	74	(3)	237691
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
489	11.0	0.0	0.0	chr1	161621675	161621747	(87334675)	+	tRNA-Asn-AAC	tRNA	1	73	(4)	237826
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
5003	23.0	4.9	1.1	chr1	162617036	162618182	(86338240)	C	L1M4	LINE/L1	(6307)	1572	380	239485
3229	14.6	4.8	0.7	chr1	163681632	163682175	(85274247)	+	LTR27D	LTR/ERV1	1	567	(48)	241115
6226	17.7	3.9	2.1	chr1	163682180	163683665	(85272757)	+	L1MC4	LINE/L1	4068	5592	(647)	241112
182	36.2	4.8	0.0	chr1	165531181	165531260	(83425162)	+	MIR3	SINE/MIR	23	106	(102)	243805
514	22.5	9.2	3.5	chr1	165531512	165531654	(83424768)	+	L1MC	LINE/L1	5670	5821	(351)	243806
742	31.2	7.8	0.0	chr1	165531671	165531952	(83424470)	+	L2	LINE/L2	2105	2410	(1009)	243807
941	11.6	0.0	0.8	chr1	171399784	171399912	(77556510)	+	FLAM_C	SINE/Alu	1	128	(15)	252630
316	15.8	5.3	1.1	chr1	171399913	171399984	(77556438)	+	MER104	DNA/TcMar-Tc2	129	181	(0)	252629
660	26.2	6.5	6.5	chr1	171399988	171400281	(77556141)	C	L2c	LINE/L2	(609)	2810	2517	252627
307	31.8	0.9	0.9	chr1	171400296	171400403	(77556019)	+	MIR3	SINE/MIR	53	160	(48)	252631
847	24.2	6.6	0.0	chr1	171644750	171644947	(77311475)	C	MIRb	SINE/MIR	(9)	259	48	253079
1432	23.5	18.1	5.9	chr1	171644992	171645650	(77310772)	+	LTR41B	LTR/ERVL	1	757	(1)	253080
10374	11.5	4.0	0.8	chr1	171826521	171828050	(77128372)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	253406
31	0.0	0.0	0.0	chr1	172032527	172032555	(76923867)	+	(T)n	Simple_repeat	1	29	(0)	253709
397	35.1	4.8	2.6	chr1	172035329	172035594	(76920828)	C	L2	LINE/L2	(1051)	2368	2097	253712
12	3.2	15.6	0.0	chr1	172035685	172035716	(76920706)	+	(TGGTTGC)n	Simple_repeat	1	37	(0)	253714
3123	3.2	0.0	0.0	chr1	172035985	172036376	(76920046)	C	L1PA3	LINE/L1	(0)	6155	5784	253715
1298	29.7	7.1	1.1	chr1	172531682	172532158	(76424264)	+	L4_A_Mam	LINE/RTE-X	3531	4038	(952)	254352
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
6322	9.8	3.1	0.3	chr1	174065473	174066391	(74890031)	+	L1MA3	LINE/L1	5361	6305	(0)	256647
2036	26.0	10.4	6.2	chr1	174066412	174066475	(74889947)	C	HAL1	LINE/L1	(937)	1570	1508	256642
2144	22.7	14.4	3.1	chr1	174066476	174067026	(74889396)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	1	256648
31	3.1	0.0	0.0	chr1	174799759	174799791	(74156631)	+	(GCA)n	Simple_repeat	1	33	(0)	257708
57	0.0	0.0	0.0	chr1	174799931	174799979	(74156443)	+	(CA)n	Simple_repeat	1	49	(0)	257709
2175	12.8	7.4	1.8	chr1	176865710	176866052	(72090370)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	260823
20	7.2	0.0	0.0	chr1	177171456	177171485	(71784937)	+	(GGC)n	Simple_repeat	1	30	(0)	261289
14	14.2	3.2	0.0	chr1	178093445	178093475	(70862947)	+	A-rich	Low_complexity	1	32	(0)	262568
41	14.1	0.0	1.4	chr1	178093761	178093834	(70862588)	+	(GCCGCC)n	Simple_repeat	1	74	(0)	262569
2226	11.6	0.0	1.3	chr1	178622213	178622522	(70333900)	C	AluSz	SINE/Alu	(5)	307	2	263361
612	19.2	7.0	7.0	chr1	180851372	180851556	(68104866)	C	LTR37A	LTR/ERV1	(220)	206	22	267071
883	26.3	7.8	10.9	chr1	183671839	183671927	(65284495)	C	L1MEd	LINE/L1	(5657)	1429	1337	271494
2653	8.8	0.0	0.0	chr1	183671928	183672232	(65284190)	C	AluSx1	SINE/Alu	(7)	305	1	271495
3940	27.7	6.8	3.4	chr1	185826244	185826932	(63129490)	+	L1M7	LINE/L1	1	709	(5509)	274825
4898	15.5	1.8	0.7	chr1	186610918	186611728	(62344694)	+	LTR8B	LTR/ERV1	1	820	(0)	275824
440	20.4	0.0	12.0	chr1	186611729	186611760	(62344662)	C	PRIMAX-int	LTR/ERV1	(5674)	513	482	275821
1070	28.9	3.3	2.0	chr1	186611816	186612172	(62344250)	C	LTR49-int	LTR/ERV1	(4057)	2274	1913	275825
8082	11.6	4.3	0.8	chr1	190617345	190618046	(58338376)	C	HSMAR1	DNA/TcMar-Mariner	(0)	1287	552	281150
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
26253	6.1	1.1	0.6	chr1	195138233	195141547	(53814875)	+	HERV9N-int	LTR/ERV1	2044	5374	(0)	287059
1601	8.3	8.4	0.0	chr1	195141548	195141777	(53814645)	+	LTR12B	LTR/ERV1	1	251	(416)	287059
1321	29.5	8.0	2.5	chr1	196276522	196277202	(52679220)	C	HAL1	LINE/L1	(681)	1826	1105	288434
8791	13.7	5.2	4.5	chr1	196738263	196739830	(52216592)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	289035
2353	13.9	0.5	0.8	chr1	196739831	196740200	(52216222)	C	THE1C	LTR/ERVL-MaLR	(0)	375	7	289035
2055	15.4	6.1	0.8	chr1	198843176	198843548	(50112874)	C	LTR8B	LTR/ERV1	(0)	820	427	291751
1818	14.6	4.0	6.0	chr1	199532599	199532933	(49423489)	+	THE1B	LTR/ERVL-MaLR	37	364	(0)	292637
5561	9.6	2.6	0.4	chr1	199532935	199533695	(49422727)	+	THE1B-int	LTR/ERVL-MaLR	2	779	(801)	292637
578	26.0	5.1	6.1	chr1	201155147	201155326	(47801096)	+	MIR3	SINE/MIR	23	200	(8)	295578
14	20.9	0.0	0.0	chr1	203619657	203619689	(45336733)	+	(CTG)n	Simple_repeat	1	33	(0)	299964
11	27.9	0.0	2.2	chr1	203619690	203619701	(45336721)	+	(CTGCTA)n	Simple_repeat	1	45	(0)	299965
1998	13.6	0.0	5.5	chr1	203619835	203620164	(45336258)	C	AluSz6	SINE/Alu	(0)	312	1	299966
423	13.3	20.3	1.0	chr1	204286605	204286703	(44669719)	C	MER45A	DNA/hAT-Tip100	(48)	130	8	301289
23	16.8	0.0	8.3	chr1	204494845	204494916	(44461506)	+	(CCTCC)n	Simple_repeat	1	72	(0)	301631
1705	13.2	2.0	0.4	chr1	204518712	204518961	(44437461)	C	AluSx	SINE/Alu	(58)	254	1	301699
265	35.0	4.6	0.0	chr1	204518983	204519085	(44437337)	C	L2b	LINE/L2	(236)	3139	3032	301700
1843	9.7	0.8	2.0	chr1	204519266	204519513	(44436909)	+	AluSp	SINE/Alu	45	289	(24)	301701
1472	16.8	10.5	0.0	chr1	204519562	204519817	(44436605)	+	AluJb	SINE/Alu	1	286	(26)	301702
13	24.5	0.0	6.7	chr1	205321319	205321378	(43635044)	+	(CCGCCGC)n	Simple_repeat	1	60	(0)	303213
566	22.2	3.1	0.0	chr1	205976518	205976643	(42979779)	+	MER45A	DNA/hAT-Tip100	46	175	(3)	304364
2127	9.8	1.0	6.0	chr1	206618941	206619255	(42337167)	+	AluSx1	SINE/Alu	1	299	(13)	305413
1637	16.0	2.8	0.6	chr1	206619256	206619348	(42337074)	+	L1MC	LINE/L1	5482	5575	(604)	305412
1619	15.6	8.0	1.4	chr1	206619349	206619630	(42336792)	+	AluJb	SINE/Alu	1	302	(10)	305414
704	22.5	2.4	9.5	chr1	208424963	208425183	(40531239)	C	MER3	DNA/hAT-Charlie	(4)	205	1	308135
901	30.2	6.1	3.5	chr1	208425302	208425671	(40530751)	+	LTR16E2	LTR/ERVL	189	568	(0)	308136
3241	18.3	4.5	2.4	chr1	209195736	209196390	(39760032)	+	LTR8B	LTR/ERV1	138	806	(14)	309280
188	23.6	1.8	5.2	chr1	209196443	209196500	(39759922)	+	L2a	LINE/L2	3371	3426	(0)	309281
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
2180	12.0	0.3	0.0	chr1	212794309	212794607	(36161815)	+	AluSq2	SINE/Alu	1	300	(13)	315153
1355	30.1	10.2	6.3	chr1	212794608	212794885	(36161537)	C	L2c	LINE/L2	(1087)	2332	2009	315150
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
5917	20.3	11.9	2.5	chr1	213283280	213284234	(35672188)	+	HAL1M8	LINE/L1	9	1044	(1947)	315960
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
706	35.5	7.1	6.5	chr1	219703235	219703795	(29252627)	+	L2b	LINE/L2	2833	3375	(0)	325010
23	15.5	2.2	0.0	chr1	220300500	220300544	(28655878)	+	(AGC)n	Simple_repeat	1	46	(0)	326003
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
15	23.4	2.8	5.4	chr1	220528499	220528570	(28427852)	+	(CCGCCTC)n	Simple_repeat	1	74	(0)	326372
3139	13.8	12.2	0.0	chr1	221308897	221309434	(27646988)	C	LTR27D	LTR/ERV1	(2)	613	1	327476
11337	9.8	1.3	0.3	chr1	221425292	221426854	(27529568)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	327616
2470	11.9	2.8	1.9	chr1	221426857	221427215	(27529207)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	327617
5002	12.4	6.7	0.0	chr1	222521264	222522027	(26434395)	+	LTR8B	LTR/ERV1	1	819	(1)	329272
756	24.4	1.6	2.4	chr1	223711940	223712168	(25244254)	+	MIRb	SINE/MIR	12	238	(30)	331089
23	21.6	0.0	0.0	chr1	224616317	224616327	(24340095)	+	(GCAGCG)n	Simple_repeat	1	21	(42)	332883
21	10.0	0.0	0.0	chr1	224616328	224616360	(24340062)	+	(GGC)n	Simple_repeat	1	33	(0)	332884
23	21.6	0.0	0.0	chr1	224616361	224616379	(24340043)	+	(GCAGCG)n	Simple_repeat	22	63	(0)	332883
10068	12.5	6.9	0.1	chr1	224909906	224911423	(24044999)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	2	333354
14	22.2	0.0	2.6	chr1	225652948	225652986	(23303436)	+	(CCT)n	Simple_repeat	1	39	(0)	334307
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
2618	7.2	10.5	1.2	chr1	225810575	225810980	(23145442)	C	LTR7	LTR/ERV1	(2)	448	1	334625
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
22	19.8	3.5	0.0	chr1	228487322	228487379	(20469043)	+	(TCCCCG)n	Simple_repeat	1	60	(0)	338797
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
332	15.2	10.8	0.0	chr1	229341682	229341747	(19614675)	C	Charlie4z	DNA/hAT-Charlie	(2)	165	92	340084
28	0.0	12.5	0.0	chr1	229342108	229342155	(19614267)	+	(CCGCGTCCT)n	Simple_repeat	1	54	(0)	340085
13	12.2	2.4	7.1	chr1	229342214	229342254	(19614168)	+	G-rich	Low_complexity	1	42	(0)	340086
13	17.8	0.0	2.9	chr1	229342542	229342575	(19613847)	+	(CCGCC)n	Simple_repeat	1	34	(0)	340087
2318	8.9	1.3	0.7	chr1	229577535	229577838	(19378584)	+	AluSx1	SINE/Alu	2	307	(5)	340542
2080	10.5	0.0	1.4	chr1	229578491	229578767	(19377655)	C	AluSx	SINE/Alu	(37)	275	3	340547
8062	12.9	2.1	1.5	chr1	231498678	231500000	(17456422)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	250	343601
4388	15.5	8.7	0.8	chr1	232177920	232178674	(16777748)	+	LTR8B	LTR/ERV1	1	820	(0)	344619
297	29.2	12.3	0.7	chr1	232178681	232178862	(16777560)	C	MIRb	SINE/MIR	(26)	242	33	344620
1240	25.6	11.2	0.7	chr1	233313666	233314201	(15642221)	+	L1MC4a	LINE/L1	5244	5842	(2040)	346194
4199	15.4	9.8	0.7	chr1	233489182	233489926	(15466496)	+	LTR8B	LTR/ERV1	1	820	(0)	346482
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
12	11.6	3.3	3.2	chr1	233904670	233904699	(15051723)	+	(CGACC)n	Simple_repeat	1	31	(0)	347068
356	27.1	0.0	1.0	chr1	234257763	234257859	(14698563)	+	L3	LINE/CR1	3242	3337	(762)	347571
3830	17.5	7.3	3.7	chr1	234257991	234258779	(14697643)	C	LTR8B	LTR/ERV1	(0)	820	1	347582
2289	22.9	9.3	3.0	chr1	234474289	234474786	(14481636)	+	HAL1	LINE/L1	1046	1658	(849)	347922
668	29.3	13.3	9.9	chr1	234474782	234476017	(14480405)	+	L1MCc	LINE/L1	13	1297	(5126)	347925
15	13.9	0.0	0.0	chr1	234507342	234507365	(14449057)	+	(C)n	Simple_repeat	1	24	(0)	347991
1195	8.0	5.8	0.0	chr1	234507488	234507650	(14448772)	C	MER30	DNA/hAT-Charlie	(1)	229	57	347992
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
181	27.9	8.8	4.6	chr1	235366167	235366275	(13590147)	+	L2a	LINE/L2	1880	1993	(1426)	349594
3270	16.5	7.2	4.2	chr1	235366296	235366990	(13589432)	C	LTR8A	LTR/ERV1	(9)	718	1	349595
661	15.1	9.2	0.8	chr1	235415163	235415281	(13541141)	C	FLAM_C	SINE/Alu	(13)	130	1	349706
14	12.2	8.2	3.8	chr1	235588828	235588876	(13367546)	+	(CCACT)n	Simple_repeat	1	53	(0)	350049
2680	14.5	11.3	3.9	chr1	235589033	235589593	(13366829)	+	LTR18B	LTR/ERVL	1	608	(6)	350050
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
224	27.0	16.2	2.5	chr1	236659811	236659977	(12296445)	C	MIR1_Amn	SINE/MIR	(29)	201	11	352051
942	14.4	8.6	1.1	chr1	236975371	236975552	(11980870)	+	L1MC2	LINE/L1	6137	6333	(11)	352573
1878	14.3	0.7	5.2	chr1	237342927	237343233	(11613189)	+	AluJb	SINE/Alu	1	293	(19)	353156
34	0.0	0.0	0.0	chr1	238383268	238383304	(10573118)	+	(A)n	Simple_repeat	1	37	(0)	354622
5222	28.7	6.9	5.9	chr1	239225326	239227537	(9728885)	C	L1M2	LINE/L1	(4604)	2962	727	355781
9347	13.8	3.1	0.7	chr1	239943484	239944914	(9011508)	C	THE1D-int	LTR/ERVL-MaLR	(162)	1469	3	356899
1401	23.7	7.3	1.2	chr1	240033344	240033757	(8922665)	+	L1MEc	LINE/L1	37	477	(5923)	357022
950	17.6	15.3	4.5	chr1	240033783	240033851	(8922571)	+	L1MEc	LINE/L1	1331	1397	(5003)	357022
2391	10.7	0.0	0.0	chr1	240662633	240662941	(8293481)	+	AluSg	SINE/Alu	2	310	(0)	358040
3519	24.5	6.5	5.2	chr1	240662942	240663439	(8292983)	C	L1MCb	LINE/L1	(5580)	842	3	358037
12	22.0	5.4	3.4	chr1	241144715	241144770	(7811652)	+	(CAGC)n	Simple_repeat	1	59	(0)	358817
44	0.0	0.0	0.0	chr1	241144927	241144964	(7811458)	+	(GT)n	Simple_repeat	1	38	(0)	358818
758	19.8	3.7	0.0	chr1	241847630	241847786	(7108636)	C	MER67A	LTR/ERV1	(0)	543	381	359940
353	26.1	9.8	2.2	chr1	241848592	241848771	(7107651)	C	MER102b	DNA/hAT-Charlie	(130)	211	17	359941
200	29.0	13.6	5.2	chr1	242108342	242108570	(6847852)	+	L2	LINE/L2	334	584	(2835)	360480
4351	9.1	2.6	1.9	chr1	242596547	242597561	(6358861)	+	MER11A	LTR/ERVK	1	1266	(0)	361214
2466	11.7	1.6	1.9	chr1	243605796	243606170	(5350252)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	362806
10255	11.6	3.2	2.0	chr1	243606171	243607731	(5348691)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	362806
13521	15.3	2.0	1.2	chr1	243818726	243819919	(5136503)	+	L1PA10	LINE/L1	8	1219	(5242)	363123
16	15.3	2.0	6.0	chr1	244048506	244048554	(4907868)	+	GA-rich	Low_complexity	1	50	(0)	363520
34	19.5	0.0	0.0	chr1	244048593	244048664	(4907758)	+	(C)n	Simple_repeat	1	72	(0)	363521
26	27.2	3.7	1.8	chr1	244048665	244048698	(4907724)	+	(CGCC)n	Simple_repeat	4	113	(0)	363522
22	25.3	1.2	3.7	chr1	244048798	244048877	(4907545)	+	G-rich	Low_complexity	1	81	(0)	363523
5589	15.2	2.1	0.2	chr1	244439315	244440231	(4516191)	C	L1M1	LINE/L1	(6609)	956	22	364196
12	17.6	2.4	4.7	chr1	244451566	244451607	(4504815)	+	(CCCGGCG)n	Simple_repeat	1	43	(0)	364208
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
26	6.3	0.0	0.0	chr1	244864025	244864058	(4092364)	+	(CTTCCT)n	Simple_repeat	1	34	(0)	364913
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
2369	8.6	0.3	0.3	chr10	75857	76160	(133721262)	+	AluSq2	SINE/Alu	1	304	(9)	371100
2324	7.7	0.7	0.7	chr10	76817	77114	(133720308)	+	AluSz	SINE/Alu	15	312	(0)	371101
198	31.6	7.3	4.1	chr10	4416787	4416931	(129380491)	+	L2	LINE/L2	2485	2634	(785)	376455
1425	19.5	3.3	6.7	chr10	5407068	5407441	(128389981)	+	MLT2C1	LTR/ERVL	10	370	(27)	377722
1753	20.7	5.6	1.0	chr10	5542919	5543328	(128254094)	+	L1MD1	LINE/L1	5813	6242	(0)	377898
503	37.8	7.5	5.5	chr10	5884790	5885170	(127912252)	+	L2b	LINE/L2	2947	3329	(46)	378506
203	32.9	4.9	0.5	chr10	8200929	8201037	(125596385)	+	L3b	LINE/CR1	4038	4088	(11)	382329
1338	18.4	2.6	6.1	chr10	9811548	9811860	(123985562)	+	L1M3	LINE/L1	5489	5790	(399)	384763
13	22.9	1.6	6.2	chr10	11017856	11017918	(122779504)	+	(GCGCCCC)n	Simple_repeat	1	64	(0)	386429
17	11.3	5.5	6.9	chr10	11018021	11018075	(122779347)	+	(CGC)n	Simple_repeat	1	58	(0)	386430
218	27.8	6.4	1.4	chr10	17216753	17216826	(116580596)	+	L2c	LINE/L2	3256	3347	(40)	396983
1754	17.6	1.4	2.0	chr10	17216857	17217151	(116580271)	+	AluJb	SINE/Alu	4	296	(16)	396984
13	16.9	0.0	0.0	chr10	17217253	17217279	(116580143)	+	(TTG)n	Simple_repeat	1	27	(0)	396985
2276	7.8	0.0	0.0	chr10	17217280	17217550	(116579872)	C	AluSq4	SINE/Alu	(28)	283	13	396986
601	21.9	9.2	15.6	chr10	17481231	17481401	(116316021)	+	L2a	LINE/L2	3164	3301	(125)	397460
5259	12.7	6.2	0.0	chr10	17481402	17482170	(116315252)	C	LTR8B	LTR/ERV1	(0)	820	1	397461
385	33.1	4.8	10.7	chr10	21021461	21021879	(112775543)	+	L2b	LINE/L2	2973	3365	(10)	402849
22	29.0	0.0	0.0	chr10	22003318	22003381	(111794041)	+	(CAG)n	Simple_repeat	1	64	(0)	404666
16	23.4	0.0	2.1	chr10	22003596	22003642	(111793780)	+	(GGCG)n	Simple_repeat	1	47	(0)	404667
1455	17.5	0.7	5.8	chr10	23438261	23438568	(110358854)	+	AluJr	SINE/Alu	9	300	(12)	406899
12	8.5	7.0	6.5	chr10	23438858	23438900	(110358522)	+	(CCGCG)n	Simple_repeat	1	46	(0)	406900
4586	13.1	8.1	1.7	chr10	28660678	28660760	(105136662)	C	LTR8B	LTR/ERV1	(3)	817	733	415520
2059	11.8	0.0	0.0	chr10	28660761	28661032	(105136390)	+	AluSz	SINE/Alu	2	273	(39)	415521
15	28.0	5.0	2.4	chr10	30015748	30015827	(103781595)	+	(GTACAT)n	Simple_repeat	1	84	(0)	417906
5704	18.2	12.8	6.3	chr10	30846417	30848049	(102949373)	+	MER52D	LTR/ERV1	369	2123	(0)	419453
29	33.1	1.4	0.0	chr10	31928175	31928324	(101869098)	+	(CA)n	Simple_repeat	1	152	(0)	420989
22	17.9	6.2	1.4	chr10	31928527	31928591	(101868831)	+	(CCG)n	Simple_repeat	1	69	(0)	420990
5692	7.1	2.6	5.5	chr10	31969059	31970051	(101827371)	+	SVA_E	Retroposon/SVA	1	862	(520)	421074
32	0.0	0.0	0.0	chr10	31970052	31970081	(101827341)	+	(G)n	Simple_repeat	1	30	(0)	421075
6496	8.0	2.8	6.2	chr10	31970082	31971613	(101825809)	+	SVA_E	Retroposon/SVA	422	1364	(18)	421074
2554	15.5	17.6	5.5	chr10	34008666	34009151	(99788271)	+	LTR8A	LTR/ERV1	149	726	(1)	424124
3874	15.2	11.1	0.8	chr10	35092616	35093350	(98704072)	+	LTR8B	LTR/ERV1	1	820	(0)	425947
2053	20.3	5.1	6.2	chr10	35093351	35093389	(98704033)	+	Charlie1a	DNA/hAT-Charlie	476	510	(945)	425944
1843	15.8	2.0	0.7	chr10	35093392	35093689	(98703733)	+	AluSz6	SINE/Alu	11	312	(0)	425948
28	11.6	4.6	3.7	chr10	43409350	43409420	(90388002)	+	G-rich	Low_complexity	1	71	(0)	433437
1108	14.0	0.6	0.0	chr10	43409548	43409711	(90387711)	+	AluJb	SINE/Alu	137	301	(11)	433438
550	30.2	11.1	1.9	chr10	44311282	44311706	(89485716)	C	L3	LINE/CR1	(77)	4022	3554	434690
385	25.7	14.1	2.0	chr10	49607470	49607677	(84189745)	+	MIRb	SINE/MIR	15	254	(14)	442088
1294	16.1	0.5	0.9	chr10	53356647	53356866	(80440556)	C	MLT2D	LTR/ERVL	(195)	219	1	447477
41	0.0	0.0	0.0	chr10	53356874	53356908	(80440514)	+	(TG)n	Simple_repeat	1	35	(0)	447478
10112	13.6	2.3	0.1	chr10	56163907	56165495	(77631927)	+	THE1D-int	LTR/ERVL-MaLR	3	1627	(4)	451108
85	4.9	11.6	0.0	chr10	57141355	57141544	(76655878)	+	(TA)n	Simple_repeat	1	212	(0)	452351
2869	9.6	6.5	1.2	chr10	57141545	57141583	(76655839)	+	MLT2A1	LTR/ERVL	408	444	(0)	452350
577	22.8	12.7	0.0	chr10	57141585	57141742	(76655680)	+	LTR8A	LTR/ERV1	547	727	(0)	452347
4397	13.1	7.7	1.7	chr10	60825713	60826482	(72970940)	+	LTR8B	LTR/ERV1	1	820	(0)	457669
501	29.1	2.6	11.7	chr10	60826550	60826805	(72970617)	C	MIRb	SINE/MIR	(1)	261	20	457670
504	28.8	9.1	5.5	chr10	61975439	61975692	(71821730)	+	MIRc	SINE/MIR	5	268	(0)	459369
18	23.5	0.0	0.0	chr10	62374408	62374452	(71422970)	+	(GCA)n	Simple_repeat	1	45	(0)	459964
222	27.6	0.9	10.1	chr10	62615989	62616117	(71181305)	C	MIRc	SINE/MIR	(116)	152	36	460338
182	25.3	23.0	0.0	chr10	62616229	62616315	(71181107)	C	L2a	LINE/L2	(2)	3424	3312	460339
2491	8.3	0.0	0.6	chr10	63108421	63108733	(70688689)	C	AluY	SINE/Alu	(0)	311	1	461185
3527	16.1	12.1	3.9	chr10	63108734	63109094	(70688328)	+	LTR8B	LTR/ERV1	435	820	(0)	461184
1752	20.1	2.8	7.1	chr10	63109095	63109127	(70688295)	C	MLT1B	LTR/ERVL-MaLR	(193)	197	180	461183
1830	14.5	2.7	0.7	chr10	63109128	63109416	(70688006)	C	AluSx1	SINE/Alu	(7)	305	11	461186
16	4.5	0.0	0.0	chr10	63466140	63466162	(70331260)	+	(GGC)n	Simple_repeat	1	23	(0)	461841
14	15.2	0.0	7.1	chr10	63521224	63521265	(70276157)	+	(GCCCTG)n	Simple_repeat	1	42	(0)	461935
13	27.7	1.5	4.5	chr10	63521301	63521323	(70276099)	+	G-rich	Low_complexity	1	66	(0)	461936
17	8.3	4.8	4.5	chr10	63521324	63521365	(70276057)	+	(GGCG)n	Simple_repeat	1	44	(0)	461937
7447	21.9	5.9	0.5	chr10	65098919	65100653	(68696769)	C	L1MC3	LINE/L1	(225)	8355	6524	464280
1815	21.5	8.6	1.2	chr10	65861274	65861682	(67935740)	+	LTR8B	LTR/ERV1	375	816	(4)	465323
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
11854	10.0	0.3	0.2	chr10	68277095	68278673	(65518749)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	468837
2909	13.9	5.4	0.0	chr10	68861092	68861545	(64935877)	C	MER9a3	LTR/ERVK	(0)	512	33	470317
3951	20.4	3.0	2.6	chr10	68861553	68863367	(64934055)	C	HERVK9-int	LTR/ERVK	(77)	7357	5054	470317
182	32.9	0.0	2.3	chr10	69180669	69180755	(64616667)	+	L2c	LINE/L2	3244	3328	(59)	471052
683	32.1	11.4	1.0	chr10	69499558	69499950	(64297472)	C	L2b	LINE/L2	(13)	3362	2924	471731
274	17.6	18.4	1.9	chr10	69500016	69500119	(64297303)	C	L2	LINE/L2	(584)	2835	2711	471732
3744	18.7	3.9	5.0	chr10	72164262	72165013	(61632409)	C	L1MB5	LINE/L1	(146)	6028	5258	476651
31	12.6	0.0	0.0	chr10	73773091	73773151	(60024271)	+	(CCAGGACT)n	Simple_repeat	1	61	(0)	479920
23	17.6	0.0	1.9	chr10	75111564	75111616	(58685806)	+	(CGCCCC)n	Simple_repeat	1	53	(0)	482444
19	14.5	0.0	2.5	chr10	75283706	75283745	(58513677)	+	GA-rich	Low_complexity	1	40	(0)	482823
14	25.9	3.0	4.3	chr10	75284126	75284192	(58513230)	+	GA-rich	Low_complexity	1	69	(0)	482824
3673	18.9	12.2	0.4	chr10	77156391	77157113	(56640309)	+	LTR8B	LTR/ERV1	1	820	(0)	485441
495	28.6	11.5	4.0	chr10	77157114	77157159	(56640263)	+	HAL1b	LINE/L1	2125	2168	(253)	485439
1436	12.0	0.0	0.6	chr10	77157160	77157342	(56640080)	+	AluSx3	SINE/Alu	1	182	(129)	485442
1054	22.9	4.4	3.2	chr10	83445258	83445534	(50351888)	+	LTR8B	LTR/ERV1	30	295	(396)	495392
1462	18.2	7.2	1.9	chr10	83445531	83445843	(50351579)	+	LTR8B	LTR/ERV1	490	820	(0)	495392
271	25.4	5.3	0.0	chr10	84327503	84327573	(49469849)	C	L4_A_Mam	LINE/RTE-X	(589)	4401	4327	496704
1349	13.2	4.0	14.1	chr10	84327791	84328124	(49469298)	+	AluJr	SINE/Alu	1	299	(13)	496705
21242	10.2	1.3	2.0	chr10	84409747	84412530	(49384892)	C	L1PA11	LINE/L1	(0)	6359	3606	496830
17	17.1	4.7	3.6	chr10	86756475	86756529	(47040893)	+	G-rich	Low_complexity	1	55	(0)	500080
17	16.1	2.3	2.2	chr10	86756568	86756611	(47040811)	+	(CCCGCC)n	Simple_repeat	1	45	(0)	500081
13	13.1	0.0	0.0	chr10	86756625	86756649	(47040773)	+	(CGG)n	Simple_repeat	1	25	(0)	500082
16	3.5	0.0	10.8	chr10	86756682	86756718	(47040704)	+	(AGG)n	Simple_repeat	1	37	(0)	500083
13	17.6	2.4	4.7	chr10	87659773	87659814	(46137608)	+	GA-rich	Low_complexity	1	43	(0)	501619
28	0.0	0.0	0.0	chr10	87659882	87659907	(46137515)	+	(GCT)n	Simple_repeat	1	26	(0)	501620
13	0.0	0.0	0.0	chr10	87659908	87659924	(46137498)	+	(CGC)n	Simple_repeat	1	17	(0)	501621
2257	16.7	11.9	1.2	chr10	87806696	87807197	(45990225)	+	MER34A1	LTR/ERV1	25	587	(0)	501851
1623	23.9	7.8	0.7	chr10	87807223	87807695	(45989727)	C	L1ME3B	LINE/L1	(495)	6838	6329	501850
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
2617	22.6	3.7	4.6	chr10	88471568	88472171	(45325251)	C	MER77	LTR/ERVL	(1)	603	6	502869
16	12.8	2.8	2.7	chr10	89645039	89645074	(44152348)	+	(CTC)n	Simple_repeat	1	37	(0)	504723
12618	13.4	2.6	3.6	chr10	92166409	92167628	(41629794)	C	Tigger1	DNA/TcMar-Tigger	(937)	1481	242	508489
3524	7.4	5.1	0.2	chr10	92591083	92591570	(41205852)	+	LTR10D	LTR/ERV1	1	513	(0)	509465
14	14.1	0.0	2.9	chr10	92591992	92592007	(41205415)	+	(ATT)n	Simple_repeat	1	16	(0)	509466
1426	16.0	0.3	9.8	chr10	92592008	92592325	(41205097)	C	AluJb	SINE/Alu	(20)	292	5	509467
12	20.7	0.0	2.9	chr10	93073896	93073930	(40723492)	+	(GGC)n	Simple_repeat	1	35	(0)	510399
12	22.4	3.5	5.1	chr10	93073949	93074005	(40723417)	+	(GCT)n	Simple_repeat	1	59	(0)	510400
17527	16.4	2.5	3.4	chr10	93734684	93739510	(40057912)	+	L1MA4	LINE/L1	2910	7708	(11)	511690
3305	15.2	1.3	1.5	chr10	93739511	93740046	(40057376)	C	Tigger2	DNA/TcMar-Tigger	(1854)	864	330	511688
999	25.1	6.0	3.1	chr10	94251211	94251567	(39545855)	+	Tigger20a	DNA/TcMar-Tigger	443	810	(163)	512644
432	14.8	10.0	0.0	chr10	94251580	94251660	(39545762)	C	Helitron3Na_Mam	RC/Helitron	(25)	461	372	512645
577	27.2	5.6	1.7	chr10	94251737	94251908	(39545514)	C	Helitron3Na_Mam	RC/Helitron	(251)	235	57	512646
15	4.8	0.0	0.0	chr10	96513616	96513649	(37283773)	+	(GCA)n	Simple_repeat	1	34	(0)	516113
2366	14.2	7.9	6.8	chr10	96802995	96803483	(36993939)	+	LTR8B	LTR/ERV1	326	820	(0)	516730
1581	29.0	7.6	6.9	chr10	96803485	96803840	(36993582)	C	L1MEd	LINE/L1	(5395)	1691	1361	516732
546	32.6	3.0	0.9	chr10	97169716	97169947	(36627475)	C	MIR	SINE/MIR	(7)	255	19	517376
997	28.1	0.0	0.4	chr10	97170152	97170383	(36627039)	+	MIR	SINE/MIR	12	242	(20)	517377
14	18.2	0.0	0.0	chr10	97737144	97737174	(36060248)	+	(GCG)n	Simple_repeat	1	31	(0)	518629
15	22.6	2.1	2.0	chr10	97850128	97850175	(35947247)	+	(CCGC)n	Simple_repeat	1	49	(0)	518875
11060	19.5	4.1	4.2	chr10	99041171	99043202	(34754220)	+	L1PA16	LINE/L1	829	3129	(5032)	520861
2568	20.2	6.0	0.6	chr10	100446295	100446812	(33350610)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	523389
14	13.8	0.0	5.6	chr10	100744304	100744339	(33053083)	+	G-rich	Low_complexity	1	36	(0)	523904
19	27.1	4.0	0.0	chr10	101062594	101062669	(32734753)	+	(GCTGCC)n	Simple_repeat	1	79	(0)	524410
20	25.1	1.6	0.0	chr10	102231447	102231507	(31565915)	+	G-rich	Low_complexity	1	62	(0)	526555
12	21.9	3.9	3.8	chr10	102231680	102231730	(31565692)	+	(GCT)n	Simple_repeat	1	53	(0)	526556
18	8.4	0.0	8.9	chr10	102504177	102504221	(31293201)	+	(GCCCCCG)n	Simple_repeat	1	45	(0)	527056
454	15.9	0.0	2.2	chr10	102645596	102645685	(31151737)	+	UCON4	Unknown	66	153	(150)	527310
17	24.7	3.3	3.2	chr10	104121880	104121940	(29675482)	+	(CG)n	Simple_repeat	1	63	(0)	530197
19	30.7	2.2	2.1	chr10	109923489	109923579	(23873843)	+	(GCGG)n	Simple_repeat	1	93	(0)	538603
34	11.4	0.0	0.0	chr10	110005975	110006032	(23791390)	+	(GCT)n	Simple_repeat	1	58	(0)	538774
2000	15.3	0.3	0.3	chr10	110068795	110069088	(23728334)	+	AluJb	SINE/Alu	1	294	(18)	538868
1778	12.3	1.0	8.2	chr10	113073395	113073710	(20723712)	+	AluJo	SINE/Alu	11	303	(9)	543742
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
1266	26.3	6.0	2.4	chr10	113198266	113198686	(20598736)	+	L1M5	LINE/L1	4417	4853	(1293)	543911
1018	24.2	2.3	9.3	chr10	113198721	113199053	(20598369)	C	L1ME4a	LINE/L1	(2392)	3754	3446	543902
1526	21.4	8.6	6.7	chr10	113742067	113742373	(20055049)	C	MLT1D	LTR/ERVL-MaLR	(122)	383	67	544806
1250	27.1	7.0	0.3	chr10	113742464	113742811	(20054611)	+	LTR16C	LTR/ERVL	1	373	(116)	544809
248	29.4	6.3	2.5	chr10	113742817	113742938	(20054484)	+	MIRc	SINE/MIR	138	264	(4)	544810
233	32.7	12.3	0.0	chr10	114086143	114086292	(19711130)	C	L1M6	LINE/L1	(5190)	1306	1136	545367
12	8.4	7.0	6.5	chr10	114768141	114768183	(19029239)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	546489
2310	11.0	0.7	0.3	chr10	114929305	114929594	(18867828)	C	AluSx3	SINE/Alu	(20)	291	1	546789
710	33.1	2.5	11.1	chr10	114929712	114930227	(18867195)	C	L3	LINE/CR1	(554)	3545	3075	546790
15	7.0	6.7	0.0	chr10	119030612	119030641	(14766781)	+	(CCGC)n	Simple_repeat	1	32	(0)	553074
15	3.3	5.4	7.7	chr10	119030642	119030647	(14766775)	+	(GCC)n	Simple_repeat	2	39	(0)	553075
18	17.4	2.1	2.1	chr10	120758848	120758894	(13038528)	+	(CTGCCTT)n	Simple_repeat	1	48	(0)	556152
194	31.1	8.0	0.0	chr10	120758914	120759016	(13038406)	+	L2	LINE/L2	1994	2105	(1314)	556153
29	25.2	0.9	5.4	chr10	121598376	121598485	(12198937)	+	(GCC)n	Simple_repeat	1	111	(0)	557380
337	30.9	8.0	0.7	chr10	122095310	122095449	(11701973)	+	MIRb	SINE/MIR	84	234	(34)	558310
518	31.6	4.1	1.6	chr10	122095480	122095669	(11701753)	C	MIRc	SINE/MIR	(43)	225	31	558311
865	23.3	1.0	2.8	chr10	122095738	122095949	(11701473)	+	MER3	DNA/hAT-Charlie	1	208	(1)	558312
30	0.0	0.0	0.0	chr10	123878297	123878324	(9919098)	+	(T)n	Simple_repeat	1	28	(0)	561036
251	28.4	5.0	1.0	chr10	124201877	124201972	(9595450)	+	MIRb	SINE/MIR	74	173	(95)	561512
1694	17.1	7.3	1.8	chr10	127401262	127401832	(6395590)	C	MER50	LTR/ERV1	(23)	711	1	566123
469	14.9	0.0	0.0	chr10	127401833	127401906	(6395516)	+	LTR8A	LTR/ERV1	632	705	(22)	566122
321	30.3	9.8	3.1	chr10	127402085	127402312	(6395110)	C	L2c	LINE/L2	(9)	3378	3134	566124
538	27.7	3.5	4.2	chr10	131895780	131895992	(1901430)	C	L1ME1	LINE/L1	(6)	6173	5973	571050
2448	6.6	0.3	0.0	chr10	131895993	131896279	(1901143)	C	AluSg	SINE/Alu	(22)	288	1	571051
136	22.1	0.7	0.3	chr10	132172936	132173222	(1624200)	+	(TCTC)n	Simple_repeat	1	289	(0)	571396
949	30.7	7.8	1.5	chr10	132173226	132173679	(1623743)	C	L1MC4a	LINE/L1	(1258)	6624	6152	571394
6251	14.5	1.9	2.1	chr10	132262774	132263595	(1533827)	+	L1PA16	LINE/L1	5330	6157	(9)	571457
3453	17.7	1.7	7.2	chr10	132328025	132328756	(1468666)	C	LTR8	LTR/ERV1	(0)	691	1	571540
620	30.0	14.5	9.2	chr10	132328757	132329140	(1468282)	+	L1MEi	LINE/L1	332	768	(1444)	571537
30	7.5	0.0	0.0	chr10	132965825	132965867	(831555)	+	(GTGTTTACAT)n	Simple_repeat	1	43	(0)	572085
682	20.1	10.2	3.0	chr10	133559109	133559272	(238150)	+	MER45A	DNA/hAT-Tip100	1	177	(1)	572630
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
464	11.2	4.9	2.5	chr11	316555	316634	(134769988)	+	AluSz6	SINE/Alu	208	289	(23)	573240
409	21.7	4.2	2.5	chr11	316661	316778	(134769844)	C	LTR8A	LTR/ERV1	(263)	464	345	573241
5461	8.8	2.2	3.8	chr11	316784	317577	(134769045)	C	MER4E1	LTR/ERV1	(0)	781	1	573242
417	26.2	3.5	4.5	chr11	1520835	1521010	(133565612)	+	L1MC4	LINE/L1	7869	8042	(0)	574684
449	29.2	5.4	3.6	chr11	1521050	1521358	(133565264)	+	L1MEg	LINE/L1	1250	1564	(4520)	574685
2390	8.9	0.0	0.3	chr11	3798325	3798626	(131287996)	C	AluSx1	SINE/Alu	(7)	305	5	577722
2508	6.4	0.7	0.0	chr11	3807310	3807607	(131279015)	C	AluSq2	SINE/Alu	(13)	300	1	577750
357	23.4	15.8	10.7	chr11	3807608	3807691	(131278931)	+	MIR	SINE/MIR	163	259	(3)	577747
18	7.8	0.0	0.0	chr11	4187448	4187474	(130899148)	+	(GCG)n	Simple_repeat	1	27	(0)	578501
21	17.2	3.1	4.5	chr11	4393705	4393768	(130692854)	+	GA-rich	Low_complexity	1	66	(0)	578776
3899	18.1	1.9	4.5	chr11	6666934	6668072	(128418550)	C	L1MB7	LINE/L1	(5228)	1523	335	581632
8264	15.9	5.7	3.4	chr11	6668100	6668181	(128418441)	C	L1M4	LINE/L1	(780)	5366	5284	581635
1717	18.9	2.7	3.5	chr11	7687710	7688077	(127398545)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	582958
16	14.6	2.5	2.4	chr11	8263184	8263244	(126823378)	+	(CCCCCG)n	Simple_repeat	1	61	(0)	583743
584	12.6	10.3	6.6	chr11	8635959	8636092	(126450530)	+	LTR8A	LTR/ERV1	1	126	(565)	584260
1087	14.9	25.5	2.1	chr11	8636069	8636382	(126450240)	+	LTR8A	LTR/ERV1	339	727	(0)	584260
814	21.7	8.7	3.5	chr11	9015994	9016222	(126070400)	+	L2a	LINE/L2	3185	3426	(0)	584887
18	19.1	3.5	3.4	chr11	10294071	10294127	(124792495)	+	(GCC)n	Simple_repeat	1	59	(0)	587321
261	26.5	7.0	2.6	chr11	10669223	10669423	(124417199)	+	MIR3	SINE/MIR	19	228	(34)	587896
1819	20.0	3.5	3.9	chr11	10866804	10867296	(124219326)	C	LTR64	LTR/ERV1	(15)	513	23	588283
286	38.0	4.7	1.4	chr11	11176061	11176268	(123910354)	+	MIRb	SINE/MIR	31	245	(23)	588781
890	20.2	2.3	8.5	chr11	11176548	11176736	(123909886)	C	MER45A	DNA/hAT-Tip100	(0)	178	2	588782
27	13.7	3.7	6.0	chr11	12674441	12674521	(122412101)	+	(CGCCG)n	Simple_repeat	1	84	(0)	591160
15	17.7	6.7	0.0	chr11	12674718	12674770	(122411852)	+	G-rich	Low_complexity	1	56	(0)	591161
14	28.0	3.3	0.0	chr11	12674842	12674901	(122411721)	+	G-rich	Low_complexity	1	62	(0)	591162
2908	16.9	10.4	3.7	chr11	13768179	13768854	(121317768)	C	LTR8A	LTR/ERV1	(0)	727	1	592797
24	14.7	0.0	0.0	chr11	14499566	14499610	(120587012)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	594061
224	29.0	10.3	1.5	chr11	14891180	14891312	(120195310)	+	MIR	SINE/MIR	95	240	(22)	594636
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
348	13.2	0.0	3.0	chr11	17276077	17276152	(117810470)	+	MIR3	SINE/MIR	96	166	(102)	598469
14	21.5	2.2	2.2	chr11	17353526	17353570	(117733052)	+	G-rich	Low_complexity	1	46	(0)	598618
13	0.0	0.0	0.0	chr11	17353714	17353730	(117732892)	+	(GCA)n	Simple_repeat	1	17	(0)	598619
14	17.6	2.5	2.4	chr11	19345199	19345238	(115741384)	+	(CGGCAG)n	Simple_repeat	1	41	(0)	602038
539	34.2	3.9	2.2	chr11	19606255	19606481	(115480141)	C	MIRb	SINE/MIR	(18)	250	20	602524
2420	10.0	0.0	0.0	chr11	20386626	20386934	(114699688)	C	AluSx	SINE/Alu	(3)	309	1	603848
739	23.5	2.5	7.1	chr11	20386935	20387082	(114699540)	C	MIR	SINE/MIR	(102)	160	15	603847
12	21.8	1.9	5.6	chr11	20387639	20387691	(114698931)	+	(TCGCGC)n	Simple_repeat	1	54	(0)	603849
5065	14.9	3.1	0.7	chr11	21816434	21817675	(113268947)	C	L1PA15	LINE/L1	(2)	6163	4897	606050
714	19.0	2.7	1.4	chr11	25150707	25150850	(109935772)	+	LTR8B	LTR/ERV1	675	820	(0)	610688
573	33.3	2.1	1.6	chr11	25150851	25151042	(109935580)	+	HUERS-P1-int	LTR/ERV1	1	193	(6070)	610688
27	27.7	3.6	2.6	chr11	30938148	30938257	(104148365)	+	(TC)n	Simple_repeat	1	114	(0)	619270
520	6.4	0.0	2.5	chr11	30938274	30938353	(104148269)	C	LTR18B	LTR/ERVL	(269)	345	268	619271
455	13.5	0.0	1.3	chr11	30938400	30938474	(104148148)	C	LTR18B	LTR/ERVL	(209)	405	332	619272
5586	13.7	0.5	0.6	chr11	30938540	30939362	(104147260)	C	HERVP71A-int	LTR/ERV1	(6767)	823	2	619267
733	23.2	10.8	0.0	chr11	32583338	32583535	(102503087)	C	L1ME1	LINE/L1	(468)	5711	5490	621907
239	28.0	9.7	1.7	chr11	34439472	34439602	(100647020)	+	L2c	LINE/L2	3257	3374	(1)	625271
373	32.7	13.0	5.5	chr11	34439686	34439976	(100646646)	C	L2b	LINE/L2	(0)	3375	3060	625272
21250	3.9	0.1	0.2	chr11	34760211	34764985	(100321637)	C	L1P1	LINE/L1	(1367)	4779	8	625792
13734	18.5	2.3	1.5	chr11	34764986	34770697	(100315925)	C	L1M2a	LINE/L1	(1195)	6367	587	625793
23	25.9	4.8	1.8	chr11	35943954	35944057	(99142565)	+	G-rich	Low_complexity	1	109	(0)	627608
33	0.0	0.0	0.0	chr11	35944174	35944204	(99142418)	+	(CGCGGGG)n	Simple_repeat	1	31	(0)	627609
309	36.1	4.2	1.7	chr11	36289123	36289309	(98797313)	C	MIR3	SINE/MIR	(46)	222	19	628185
6693	16.7	2.6	3.0	chr11	36665932	36667226	(98419396)	+	HUERS-P3b-int	LTR/ERV1	409	1877	(5541)	628759
7413	5.1	1.5	0.0	chr11	59136291	59137263	(75949359)	+	LTR5B	LTR/ERVK	1	988	(14)	656385
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
190	27.9	1.6	3.2	chr11	62122130	62122192	(72964430)	C	MIR3	SINE/MIR	(57)	151	90	661547
657	22.4	8.4	5.3	chr11	62122195	62122401	(72964221)	C	MER20	DNA/hAT-Charlie	(4)	215	2	661548
1531	26.2	5.7	2.5	chr11	62621150	62621731	(72464891)	C	L2a	LINE/L2	(0)	3426	2828	662417
13	18.8	0.0	5.0	chr11	62621822	62621861	(72464761)	+	(CGCCC)n	Simple_repeat	1	40	(0)	662418
232	29.2	5.0	2.0	chr11	62679341	62679438	(72407184)	+	L1ME4c	LINE/L1	301	401	(429)	662552
1808	12.8	0.0	5.4	chr11	62857427	62857723	(72228899)	+	AluJb	SINE/Alu	30	310	(2)	662966
15	23.4	1.8	5.2	chr11	63938999	63939055	(71147567)	+	(GCC)n	Simple_repeat	1	58	(0)	664694
17	21.5	1.9	2.8	chr11	64186601	64186656	(70899966)	+	G-rich	Low_complexity	1	55	(0)	665143
18	13.5	6.5	4.5	chr11	64713678	64713739	(70372883)	+	(GCCCCCG)n	Simple_repeat	1	66	(0)	666090
280	23.8	20.6	3.4	chr11	65133717	65133886	(69952736)	C	MIRc	SINE/MIR	(70)	198	2	666903
13	12.1	3.6	0.0	chr11	65334301	65334328	(69752294)	+	(CCGTC)n	Simple_repeat	1	29	(0)	667347
181	26.7	10.3	3.0	chr11	66282791	66282925	(68803697)	+	MIR3	SINE/MIR	30	175	(33)	669177
222	26.1	3.0	4.4	chr11	66745697	66745764	(68340858)	C	MIRc	SINE/MIR	(189)	79	13	670148
35	0.0	2.8	0.0	chr11	66745794	66745829	(68340793)	+	(GTTT)n	Simple_repeat	1	37	(0)	670149
2199	8.6	1.1	0.0	chr11	66745830	66746107	(68340515)	C	AluSz	SINE/Alu	(31)	281	1	670150
18	23.3	1.8	1.7	chr11	67289258	67289314	(67797308)	+	(CCCGG)n	Simple_repeat	1	58	(0)	671352
2401	9.2	0.3	0.0	chr11	67478209	67478512	(67608110)	+	AluSx1	SINE/Alu	1	305	(7)	671719
869	30.5	6.7	5.1	chr11	67478513	67478602	(67608020)	C	L1M5	LINE/L1	(1685)	4461	4373	671718
2173	12.0	1.4	0.0	chr11	67478603	67478894	(67607728)	C	AluSz	SINE/Alu	(16)	296	1	671720
897	23.5	21.7	1.7	chr11	68225502	68225860	(66860762)	C	LTR16A	LTR/ERVL	(0)	451	1	673003
352	25.5	11.2	1.5	chr11	68226053	68226229	(66860393)	+	LTR16C	LTR/ERVL	333	535	(3)	673004
12	13.7	6.2	0.0	chr11	68282958	68282989	(66803633)	+	(CACCTG)n	Simple_repeat	1	34	(0)	673127
1454	20.1	12.8	3.5	chr11	69164878	69165420	(65921202)	+	MER77	LTR/ERVL	2	679	(21)	674621
2886	19.6	3.0	3.3	chr11	71562142	71562628	(63523994)	+	L1MB8	LINE/L1	5498	5987	(191)	678442
239	34.3	7.3	1.4	chr11	72247027	72247168	(62839454)	+	L2b	LINE/L2	2761	2911	(508)	679604
434	35.6	4.8	6.1	chr11	72247323	72247615	(62839007)	+	L2b	LINE/L2	3087	3375	(0)	679604
294	29.0	16.4	0.7	chr11	73647967	73648105	(61438517)	+	MIRc	SINE/MIR	50	214	(54)	682325
3859	9.7	2.3	6.7	chr11	73938890	73939521	(61147101)	C	LTR14B	LTR/ERVK	(0)	608	5	683082
6387	13.1	9.3	0.3	chr11	74826505	74827592	(60259030)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	435	684895
18	31.1	1.8	0.0	chr11	74988468	74988524	(60098098)	+	(AT)n	Simple_repeat	1	58	(0)	685135
19	25.4	0.0	0.0	chr11	75668888	75668938	(59417684)	+	(GCC)n	Simple_repeat	1	51	(0)	686539
14	27.5	3.5	0.0	chr11	75668987	75669043	(59417579)	+	(GCCGCT)n	Simple_repeat	1	59	(0)	686540
12	22.2	4.8	0.0	chr11	75669187	75669228	(59417394)	+	(TCCCTCC)n	Simple_repeat	1	44	(0)	686541
4135	11.9	13.1	0.3	chr11	76905982	76906696	(58179926)	+	LTR8B	LTR/ERV1	1	820	(0)	688917
811	16.9	0.0	4.4	chr11	76906723	76906858	(58179764)	C	FLAM_C	SINE/Alu	(11)	132	3	688918
318	29.2	4.5	1.9	chr11	78187882	78187989	(56898633)	+	MIRb	SINE/MIR	88	198	(70)	691564
247	33.2	10.1	4.1	chr11	83052161	83052402	(52034220)	C	MIRc	SINE/MIR	(2)	266	9	699929
524	22.7	11.9	0.5	chr11	86676566	86676751	(48409871)	+	LTR50	LTR/ERVL	7	216	(579)	705928
397	28.9	4.2	2.4	chr11	86676884	86677092	(48409530)	+	LTR33A	LTR/ERVL	297	509	(11)	705929
3657	16.7	10.0	4.7	chr11	86738322	86739095	(48347527)	+	LTR8B	LTR/ERV1	1	820	(0)	706033
531	27.3	10.1	3.8	chr11	86739096	86739254	(48347368)	C	MIRb	SINE/MIR	(92)	176	4	706032
210	29.3	10.1	0.0	chr11	86904234	86904349	(48182273)	+	MIRc	SINE/MIR	11	139	(129)	706274
241	34.1	16.9	2.9	chr11	86904341	86904548	(48182074)	+	L2c	LINE/L2	2942	3184	(203)	706275
13	22.5	0.0	4.4	chr11	93543471	93543515	(41543107)	+	(GCCCCC)n	Simple_repeat	1	45	(0)	715720
191	33.1	1.3	8.6	chr11	93543565	93543821	(41542801)	+	L2a	LINE/L2	3128	3413	(13)	715721
1527	23.4	1.9	1.9	chr11	94721402	94721775	(40364847)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	717569
1098	16.1	3.7	5.9	chr11	94721776	94721840	(40364782)	+	MER33	DNA/hAT-Charlie	260	324	(0)	717568
259	32.3	14.8	5.3	chr11	94721853	94722156	(40364466)	C	MamRTE1	LINE/RTE-BovB	(41)	3771	3434	717570
2391	6.2	0.0	2.3	chr11	95107663	95107966	(39978656)	C	AluSc8	SINE/Alu	(14)	297	1	718147
295	29.0	5.8	0.0	chr11	102268948	102269078	(32817544)	+	MIRb	SINE/MIR	95	233	(35)	727663
346	33.6	3.2	0.0	chr11	102830982	102831100	(32255522)	+	L2a	LINE/L2	1919	2041	(1378)	728525
439	30.8	5.1	6.6	chr11	107660569	107660766	(27425856)	+	MIRc	SINE/MIR	14	208	(60)	735260
2037	11.9	2.3	2.9	chr11	108499010	108499126	(26587496)	C	AluJr	SINE/Alu	(192)	120	4	736922
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
13	27.9	2.9	2.9	chr11	110429986	110430053	(24656569)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	739820
2577	15.7	2.6	0.0	chr11	110965701	110966115	(24120507)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	740635
519	31.4	7.9	7.0	chr11	110966167	110966553	(24120069)	+	MLT1H	LTR/ERVL-MaLR	99	549	(0)	740636
17	23.7	0.0	3.7	chr11	115504293	115504358	(19582264)	+	(CAGCCG)n	Simple_repeat	1	63	(0)	747726
28	0.0	0.0	0.0	chr11	119018676	119018701	(16067921)	+	(GGA)n	Simple_repeat	1	26	(0)	754099
222	31.3	13.8	1.5	chr11	125483400	125483532	(9603090)	+	Penelope1_Vert	LINE/Penelope	365	516	(571)	764590
34	0.0	0.0	0.0	chr11	126276287	126276315	(8810307)	+	(GT)n	Simple_repeat	1	29	(0)	765813
916	17.5	1.6	0.0	chr11	128175816	128175998	(6910624)	+	MER53	DNA/hAT	8	193	(0)	768545
403	14.8	14.6	0.0	chr11	128176217	128176304	(6910318)	+	MLT1A1	LTR/ERVL-MaLR	1	103	(305)	768546
183	29.2	0.0	8.4	chr11	128176305	128176375	(6910247)	+	MIRc	SINE/MIR	129	193	(75)	768547
446	31.0	6.9	9.8	chr11	128948519	128948965	(6137657)	+	L1MEg	LINE/L1	189	621	(5621)	769615
23	15.4	2.5	4.9	chr11	130314765	130314825	(4771797)	+	G-rich	Low_complexity	1	59	(0)	771694
19	14.1	0.0	4.7	chr11	130314827	130314869	(4771753)	+	(GCC)n	Simple_repeat	1	43	(0)	771695
16	8.9	0.0	9.3	chr11	130314958	130315000	(4771622)	+	G-rich	Low_complexity	1	43	(0)	771696
1290	20.3	3.0	1.4	chr11	134317083	134317372	(769250)	C	L1M4c	LINE/L1	(4573)	1811	1517	777082
1287	27.5	7.0	2.8	chr11	134317389	134318127	(768495)	C	L1ME3A	LINE/L1	(3198)	2948	2163	777080
3974	14.6	9.4	0.0	chr11	134748506	134749217	(337405)	C	LTR8B	LTR/ERV1	(21)	799	14	777609
353	28.8	10.2	8.2	chr12	376771	377001	(132898308)	+	HAL1	LINE/L1	46	281	(2226)	778630
291	23.1	22.2	0.0	chr12	377042	377199	(132898110)	+	HAL1	LINE/L1	271	464	(2043)	778630
1883	24.4	10.3	1.6	chr12	377235	377975	(132897334)	+	HAL1	LINE/L1	1185	1997	(510)	778630
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
45	25.6	3.8	4.5	chr12	991143	991354	(132283955)	+	(CGG)n	Simple_repeat	1	220	(0)	779868
768	17.6	1.1	11.6	chr12	1049355	1049553	(132225756)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	779997
230	22.6	0.0	1.9	chr12	1049554	1049607	(132225702)	C	MER117	DNA/hAT-Charlie	(141)	56	4	779998
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
17	15.7	0.0	2.6	chr12	1691119	1691157	(131584152)	+	(CCCCCTC)n	Simple_repeat	1	39	(0)	781101
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
470	20.9	7.8	0.7	chr12	4987903	4988056	(128287253)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	786373
5345	11.6	5.2	0.3	chr12	7058317	7059095	(126216214)	+	LTR8B	LTR/ERV1	1	820	(0)	789880
773	29.6	8.9	7.3	chr12	7059096	7059258	(126216051)	C	MLT1N2	LTR/ERVL-MaLR	(412)	150	10	789879
6043	13.6	5.1	0.7	chr12	7175275	7176374	(126098935)	C	L1MC1	LINE/L1	(0)	6724	5577	790057
11	30.3	2.0	0.0	chr12	8697399	8697447	(124577862)	+	(CGGCCGG)n	Simple_repeat	1	50	(0)	792745
15	21.4	1.6	6.3	chr12	8697834	8697897	(124577412)	+	(CGCCG)n	Simple_repeat	1	60	(0)	792746
12	33.2	0.0	1.7	chr12	8698023	8698080	(124577229)	+	G-rich	Low_complexity	1	58	(0)	792747
265	29.5	9.5	0.0	chr12	11170964	11171058	(122104251)	+	MIRb	SINE/MIR	46	150	(118)	796143
13	8.1	3.9	0.0	chr12	12717774	12717799	(120557510)	+	(TTTGT)n	Simple_repeat	1	27	(0)	798630
24	25.9	3.3	2.1	chr12	14365688	14365778	(118909531)	+	(GCG)n	Simple_repeat	1	94	(0)	801269
16	10.4	0.0	5.7	chr12	15882461	15882495	(117392814)	+	(CCCT)n	Simple_repeat	1	35	(0)	803443
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
3823	2.6	1.5	0.0	chr12	17387069	17387531	(115887778)	C	L1PA4	LINE/L1	(1)	6154	5685	805459
432	28.9	10.3	2.8	chr12	17387534	17388145	(115887164)	C	L1MEg	LINE/L1	(4708)	1534	856	805456
1867	18.2	0.0	1.6	chr12	19086536	19086848	(114188461)	C	AluJb	SINE/Alu	(4)	308	1	807502
370	37.5	7.6	2.7	chr12	19752560	19752858	(113522451)	+	L2a	LINE/L2	2632	2946	(473)	808711
923	20.9	12.8	6.6	chr12	19752869	19753232	(113522077)	C	LTR8B	LTR/ERV1	(20)	800	411	808712
2726	1.3	0.3	1.3	chr12	21680173	21680473	(111594836)	+	AluYi6	SINE/Alu	1	298	(13)	811097
3649	17.4	11.2	0.3	chr12	23363781	23364510	(109910799)	+	LTR8B	LTR/ERV1	1	820	(0)	813494
625	33.7	5.5	7.8	chr12	23364511	23364623	(109910686)	+	L2c	LINE/L2	2712	2821	(598)	813493
2591	7.1	0.0	0.7	chr12	23364624	23364931	(109910378)	+	AluYh3	SINE/Alu	1	306	(5)	813495
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
5344	12.4	1.3	3.5	chr12	27905124	27906037	(105369272)	C	MER4D	LTR/ERV1	(9)	894	1	820324
2706	16.0	15.1	1.4	chr12	27906111	27906736	(105368573)	C	LTR8A	LTR/ERV1	(0)	727	1	820325
582	25.0	2.6	2.6	chr12	29399407	29399599	(103875710)	C	L1MB8	LINE/L1	(586)	5656	5464	822308
306	28.5	8.9	8.3	chr12	29399625	29399685	(103875624)	C	L1MB8	LINE/L1	(1324)	4822	4774	822308
2500	9.0	0.0	0.0	chr12	29399686	29399995	(103875314)	C	AluY	SINE/Alu	(1)	310	1	822312
14	18.5	2.6	2.5	chr12	30754859	30754897	(102520412)	+	(CTC)n	Simple_repeat	1	40	(0)	824129
300	35.0	6.2	6.9	chr12	30755000	30755260	(102520049)	+	L1M4b	LINE/L1	291	549	(6318)	824130
2134	11.9	1.4	0.7	chr12	31484523	31484800	(101790509)	+	AluSx3	SINE/Alu	2	281	(30)	825369
30	5.6	0.0	0.0	chr12	31484801	31484838	(101790471)	+	(AAACA)n	Simple_repeat	1	38	(0)	825370
9717	9.1	1.5	2.8	chr12	31484839	31485552	(101789757)	+	HSMAR1	DNA/TcMar-Mariner	576	1284	(3)	825366
4444	5.1	0.0	0.0	chr12	31665526	31666038	(101609271)	C	MER9a2	LTR/ERVK	(0)	513	1	825766
989	30.8	11.6	5.9	chr12	31666287	31666638	(101608671)	C	L1MEd	LINE/L1	(6349)	929	535	825767
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
14	5.0	0.0	0.0	chr12	34021931	34021951	(99253358)	+	(AAAC)n	Simple_repeat	1	21	(0)	829731
32	0.0	0.0	0.0	chr12	34022251	34022280	(99253029)	+	(T)n	Simple_repeat	1	30	(0)	829732
2386	14.2	0.5	0.8	chr12	40661438	40661813	(92613496)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	834005
10558	12.1	2.5	0.2	chr12	40661816	40663407	(92611902)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	834005
11558	10.7	0.6	0.2	chr12	41945671	41947295	(91328014)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	835737
668	22.4	1.2	9.1	chr12	41982428	41982535	(91292774)	+	MER45A	DNA/hAT-Tip100	1	104	(74)	835792
3247	15.1	1.6	6.1	chr12	41982536	41983212	(91292097)	C	L1MB7	LINE/L1	(14)	6170	5525	835793
3625	15.2	12.5	1.5	chr12	42745904	42746630	(90528679)	+	LTR8B	LTR/ERV1	1	818	(2)	837130
12	16.5	0.0	0.0	chr12	43835773	43835799	(89439510)	+	(CGGCC)n	Simple_repeat	1	27	(0)	838633
14	18.5	4.8	6.2	chr12	43835973	43836034	(89439275)	+	(GCG)n	Simple_repeat	1	65	(0)	838634
11376	11.0	1.1	1.4	chr12	45510865	45512500	(87762809)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	840901
2117	13.6	1.8	3.9	chr12	45512501	45512889	(87762420)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	840901
30	0.0	0.0	0.0	chr12	45655164	45655189	(87620120)	+	(AC)n	Simple_repeat	1	26	(0)	841152
1526	16.9	0.4	6.1	chr12	47607277	47607572	(85667737)	+	MLT-int	LTR/ERVL-MaLR	1317	1595	(140)	843948
1408	16.4	1.7	0.0	chr12	47607565	47607796	(85667513)	+	LTR8B	LTR/ERV1	583	818	(2)	843949
338	21.9	0.0	0.0	chr12	47607887	47607950	(85667359)	C	MLT1A-int	LTR/ERVL-MaLR	(993)	742	679	843945
13537	16.1	3.2	1.1	chr12	48586087	48587162	(84688147)	+	L1PA13	LINE/L1	1	1121	(5382)	845379
2307	21.8	2.7	4.3	chr12	49314789	49315343	(83959966)	C	MLT2B3	LTR/ERVL	(8)	546	1	846943
274	16.7	2.0	0.0	chr12	49741082	49741129	(83534180)	C	Arthur1C	DNA/hAT-Tip100	(313)	50	2	847714
17	16.0	0.0	7.0	chr12	54082554	54082566	(79192743)	+	G-rich	Low_complexity	1	12	(0)	855838
48	0.0	0.0	2.1	chr12	54082567	54082614	(79192695)	+	(CCGGGG)n	Simple_repeat	1	48	(0)	855839
17	6.1	5.6	2.6	chr12	54082618	54082653	(79192656)	+	(GGGGA)n	Simple_repeat	1	38	(0)	855840
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
440	20.9	2.6	3.5	chr12	57865070	57865183	(75410126)	C	L2a	LINE/L2	(2)	3424	3312	861950
41	13.8	8.7	0.0	chr12	57941429	57941532	(75333777)	+	(GCCCCTC)n	Simple_repeat	1	113	(0)	862097
5286	23.1	7.1	6.1	chr12	62435156	62436892	(70838417)	+	L1M2	LINE/L1	10	1777	(5072)	867915
293	17.8	8.9	10.9	chr12	63091081	63091263	(70184046)	+	Charlie18a	DNA/hAT-Charlie	91	269	(73)	868959
269	38.9	6.4	1.5	chr12	63091351	63091619	(70183690)	C	L2b	LINE/L2	(568)	2851	2569	868958
930	29.6	7.5	3.0	chr12	65520482	65521196	(67754113)	+	L2a	LINE/L2	2691	3426	(0)	872904
289	29.7	2.1	17.0	chr12	67411396	67411618	(65863691)	C	L2b	LINE/L2	(24)	3402	3198	875868
261	21.2	13.2	0.0	chr12	67411648	67411713	(65863596)	C	MER5C	DNA/hAT-Charlie	(0)	313	238	875869
1028	24.7	4.7	0.5	chr12	67411711	67411934	(65863375)	C	Charlie10	DNA/hAT-Charlie	(2580)	242	9	875870
645	30.9	13.6	1.7	chr12	67732855	67733143	(65542166)	+	L2a	LINE/L2	2960	3261	(165)	876343
28	0.0	5.9	0.0	chr12	67733144	67733177	(65542132)	+	(TTTA)n	Simple_repeat	1	36	(0)	876344
645	30.9	13.6	1.7	chr12	67733178	67733296	(65542013)	+	L2a	LINE/L2	3262	3424	(2)	876343
8576	17.6	1.4	5.2	chr12	68064825	68068023	(65207286)	C	L1PA17	LINE/L1	(2354)	4561	1509	876808
744	30.6	2.8	4.5	chr12	68068061	68068348	(65206961)	C	L1PA17	LINE/L1	(6013)	1202	920	876808
2928	19.3	2.0	2.6	chr12	69176079	69176620	(64098689)	+	LTR45C	LTR/ERV1	1	539	(0)	878843
3005	16.3	7.5	12.1	chr12	69176625	69177124	(64098185)	C	LTR8A	LTR/ERV1	(3)	724	190	878844
841	21.1	9.8	1.8	chr12	69283885	69284212	(63991097)	+	L1ME3E	LINE/L1	4973	5329	(817)	879014
16	9.3	0.0	0.0	chr12	69284454	69284476	(63990833)	+	(T)n	Simple_repeat	1	23	(0)	879015
13	16.7	4.8	2.3	chr12	69470606	69470647	(63804662)	+	(GCTCCGG)n	Simple_repeat	1	44	(0)	879354
19	6.1	5.7	0.0	chr12	69738825	69738859	(63536450)	+	(GCTCCCG)n	Simple_repeat	1	37	(0)	879832
18	18.5	8.2	0.0	chr12	69738860	69738884	(63536425)	+	(CGCTCCCG)n	Simple_repeat	2	66	(0)	879833
13	16.9	4.8	2.3	chr12	69739409	69739450	(63535859)	+	(GCGGC)n	Simple_repeat	1	44	(0)	879834
16	27.9	1.5	2.9	chr12	72271577	72271644	(61003665)	+	(CCTC)n	Simple_repeat	1	69	(0)	883611
13	18.6	4.8	6.2	chr12	72272276	72272337	(61002972)	+	(GCGAG)n	Simple_repeat	1	65	(0)	883612
9737	13.4	3.5	0.9	chr12	73800600	73802134	(59473175)	+	THE1C-int	LTR/ERVL-MaLR	5	1580	(0)	885424
350	31.2	9.9	8.2	chr12	75630433	75630693	(57644616)	C	MLT1N2	LTR/ERVL-MaLR	(72)	490	215	887823
21	0.0	0.0	0.0	chr12	75630776	75630798	(57644511)	+	(A)n	Simple_repeat	1	23	(0)	887825
8395	16.8	5.9	1.0	chr12	76517993	76519560	(56755749)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	2	889365
2322	14.7	4.2	0.5	chr12	76519562	76519971	(56755338)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	889365
2084	13.4	1.3	0.7	chr12	84654755	84655059	(48620250)	+	AluSq2	SINE/Alu	7	313	(0)	900544
1723	12.5	7.6	13.9	chr12	84655060	84655385	(48619924)	C	THE1D	LTR/ERVL-MaLR	(73)	308	1	900543
293	34.4	11.1	3.2	chr12	84655393	84655831	(48619478)	+	MLT1K	LTR/ERVL-MaLR	41	518	(77)	900545
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
19	11.4	2.6	0.0	chr12	85280930	85280967	(47994342)	+	(AAACAAA)n	Simple_repeat	1	39	(0)	901406
3142	22.2	6.4	5.6	chr12	86405138	86406762	(46868547)	+	L1MD	LINE/L1	4104	5637	(605)	902921
9808	14.7	2.4	2.1	chr12	87165286	87166886	(46108423)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	27	903858
2348	13.2	2.4	0.8	chr12	89090200	89090567	(44184742)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	906453
9689	11.7	6.4	1.4	chr12	89090569	89090957	(44184352)	+	THE1C-int	LTR/ERVL-MaLR	1	437	(1143)	906453
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
17	9.9	0.0	5.4	chr12	89525939	89525975	(43749334)	+	G-rich	Low_complexity	1	37	(0)	907165
15	21.8	0.0	0.0	chr12	89708841	89708877	(43566432)	+	(GGC)n	Simple_repeat	1	37	(0)	907474
27	23.0	1.4	1.4	chr12	89709271	89709343	(43565966)	+	(CGC)n	Simple_repeat	1	74	(0)	907475
18	12.0	0.0	0.0	chr12	89709389	89709415	(43565894)	+	(GC)n	Simple_repeat	1	27	(0)	907476
11	13.2	5.7	2.7	chr12	89709428	89709462	(43565847)	+	G-rich	Low_complexity	1	37	(0)	907477
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
10352	13.6	1.3	0.6	chr12	91390931	91392665	(41882644)	C	L1MA3	LINE/L1	(880)	5266	3520	909877
240	35.6	0.0	1.0	chr12	91392698	91392799	(41882510)	+	LTR16E1	LTR/ERVL	101	201	(337)	909878
2512	27.6	7.9	8.0	chr12	91392804	91393673	(41881636)	C	ERV3-16A3_I-int	LTR/ERVL	(782)	4444	3579	909879
14	20.4	3.7	3.6	chr12	92146392	92146445	(41128864)	+	(GTGCG)n	Simple_repeat	1	56	(0)	911016
269	25.7	5.4	5.4	chr12	94223014	94223124	(39052185)	C	Charlie18a	DNA/hAT-Charlie	(4)	338	228	914888
1034	7.3	0.0	0.0	chr12	94223132	94223255	(39052054)	+	AluSz	SINE/Alu	1	124	(188)	914889
2510	8.3	0.0	1.9	chr12	98837050	98837363	(34437946)	+	AluSc8	SINE/Alu	1	308	(3)	923003
3326	18.4	13.7	0.7	chr12	99017121	99017832	(34257477)	+	LTR8B	LTR/ERV1	1	819	(1)	923273
580	20.3	3.0	0.8	chr12	99017833	99017896	(34257413)	+	LTR59	LTR/ERV1	68	131	(466)	923272
1200	13.6	0.5	4.2	chr12	99017887	99018101	(34257208)	+	LTR59	LTR/ERV1	386	592	(5)	923272
1618	16.4	0.0	0.4	chr12	104403108	104403351	(28871958)	+	AluJb	SINE/Alu	40	282	(30)	932492
189	16.1	0.0	0.0	chr12	104456707	104456737	(28818572)	C	MER131	DNA?	(150)	65	35	932617
16	20.7	2.2	2.1	chr12	104457113	104457158	(28818151)	+	(GGC)n	Simple_repeat	1	47	(0)	932618
18	15.3	0.0	2.6	chr12	104457138	104457175	(28818134)	+	GA-rich	Low_complexity	1	38	(0)	932619
1140	28.7	13.1	3.2	chr12	104959444	104960135	(28315174)	C	Kanga11a	DNA/TcMar-Tc2	(117)	853	88	933579
564	30.3	8.3	6.2	chr12	104960194	104960591	(28314718)	C	L2b	LINE/L2	(168)	3219	2802	933577
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
12299	10.8	3.0	2.8	chr12	106209860	106212856	(27062453)	C	L1PA7	LINE/L1	(3365)	3096	10	935818
430	32.2	12.0	5.4	chr12	107648726	107649112	(25626197)	+	L3	LINE/CR1	3606	4021	(78)	938617
2325	9.8	0.0	0.7	chr12	108593162	108593466	(24681843)	+	AluSz	SINE/Alu	1	303	(9)	940611
307	33.0	5.1	3.3	chr12	110267279	110267488	(23007821)	+	AmnSINE1	SINE/5S-Deu-L2	265	478	(97)	944384
13	24.4	0.0	4.3	chr12	110281353	110281399	(22993910)	+	(CGCCC)n	Simple_repeat	1	47	(0)	944414
17	16.6	6.4	0.0	chr12	111598828	111598874	(21676435)	+	(CGAGGA)n	Simple_repeat	1	50	(0)	947447
74	1.4	0.0	0.0	chr12	111598950	111599019	(21676290)	+	(GCT)n	Simple_repeat	1	70	(0)	947448
15	24.7	3.8	0.0	chr12	111599329	111599381	(21675928)	+	G-rich	Low_complexity	1	55	(0)	947449
14	13.2	2.9	2.8	chr12	111599379	111599413	(21675896)	+	(CCGCC)n	Simple_repeat	1	36	(0)	947450
13	23.3	0.0	2.4	chr12	113221664	113221705	(20053604)	+	G-rich	Low_complexity	1	42	(0)	951099
233	28.7	12.2	0.8	chr12	115457415	115457537	(17817772)	+	L2b	LINE/L2	2934	3072	(303)	956055
1771	17.2	0.7	2.6	chr12	115879823	115880125	(17395184)	C	AluJr	SINE/Alu	(7)	305	9	956983
892	21.3	9.8	1.0	chr12	115880359	115880562	(17394747)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	956984
1163	27.6	12.3	4.4	chr12	117088781	117090260	(16185049)	+	L1MEd	LINE/L1	83	1722	(5381)	959543
348	26.8	20.7	5.7	chr12	117875661	117875977	(15399332)	+	L2a	LINE/L2	3039	3415	(11)	961275
12	5.5	0.0	0.0	chr12	118372676	118372694	(14902615)	+	(CCG)n	Simple_repeat	1	19	(0)	962447
332	32.0	0.0	0.0	chr12	119667578	119667674	(13607635)	C	L2	LINE/L2	(571)	2848	2752	965294
14	19.2	4.8	0.0	chr12	119667740	119667781	(13607528)	+	(GCCTGG)n	Simple_repeat	1	44	(0)	965295
3274	14.0	4.8	7.4	chr12	119955784	119956179	(13319130)	+	LTR26	LTR/ERV1	192	603	(0)	965912
1744	26.6	5.2	3.6	chr12	119956180	119956505	(13318804)	C	LTR16D1	LTR/ERVL	(149)	526	178	965910
12	17.6	0.0	5.6	chr12	119988991	119989026	(13286283)	+	(CGC)n	Simple_repeat	1	36	(0)	966004
200	31.4	2.8	0.0	chr12	120446906	120446975	(12828334)	C	MIRc	SINE/MIR	(124)	144	73	967102
13	23.3	0.0	0.0	chr12	120904736	120904770	(12370539)	+	(TTCG)n	Simple_repeat	1	35	(0)	968073
18	15.9	0.0	0.0	chr12	121466503	121466537	(11808772)	+	(CGC)n	Simple_repeat	1	35	(0)	969436
16	23.4	7.3	0.0	chr12	121466775	121466829	(11808480)	+	(GC)n	Simple_repeat	1	59	(0)	969437
17	26.2	0.0	6.5	chr12	121712666	121712742	(11562567)	+	G-rich	Low_complexity	1	77	(0)	970150
573	22.4	1.0	6.8	chr12	121888204	121888402	(11386907)	C	MIR	SINE/MIR	(2)	228	42	970591
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
508	25.7	1.4	3.5	chr12	121889188	121889328	(11385981)	C	MIR	SINE/MIR	(2)	260	123	970593
1200	18.3	0.0	3.4	chr12	122287023	122287205	(10988104)	+	AluJr	SINE/Alu	134	312	(0)	971481
1524	22.7	4.8	1.1	chr12	122356231	122356591	(10918718)	+	MER119	DNA/hAT-Charlie	3	377	(206)	971611
9222	2.9	0.3	25.5	chr12	122356602	122358455	(10916854)	+	SVA_D	Retroposon/SVA	1	1386	(0)	971612
14	12.5	0.0	0.0	chr12	122500719	122500744	(10774565)	+	(TCG)n	Simple_repeat	1	26	(0)	972004
1859	13.4	5.2	0.7	chr12	122501193	122501483	(10773826)	+	AluJr	SINE/Alu	1	305	(7)	972005
1633	19.9	12.4	0.3	chr12	123575936	123576283	(9699026)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	153	974451
761	17.5	0.0	0.0	chr12	123576298	123576411	(9698898)	+	AluSz	SINE/Alu	1	114	(198)	974452
29	0.0	3.2	0.0	chr12	123584561	123584591	(9690718)	+	(GCG)n	Simple_repeat	1	32	(0)	974479
15	32.2	0.0	1.6	chr12	123712361	123712423	(9562886)	+	(GCG)n	Simple_repeat	1	63	(0)	974781
4482	15.3	4.4	5.2	chr12	124146994	124147180	(9128129)	C	MER4D	LTR/ERV1	(707)	196	2	975556
1365	24.3	9.1	1.6	chr12	124147181	124147595	(9127714)	+	MLT1L	LTR/ERVL-MaLR	157	608	(2)	975555
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
248	21.8	1.3	3.7	chr12	124940188	124940268	(8335041)	C	MER5A	DNA/hAT-Charlie	(63)	126	48	977202
1159	9.9	4.7	0.0	chr12	127161409	127161570	(6113739)	C	MER51B	LTR/ERV1	(207)	170	1	981005
724	23.7	4.1	5.4	chr12	127161571	127161747	(6113562)	+	LTR8A	LTR/ERV1	554	727	(0)	981008
1372	8.4	0.0	0.0	chr12	128863800	128863965	(4411344)	+	AluYh3	SINE/Alu	136	301	(10)	984019
10438	11.0	1.2	0.6	chr12	131397093	131398681	(1876628)	C	THE1D-int	LTR/ERVL-MaLR	(30)	1601	2	988063
2822	18.4	11.2	3.6	chr12	131606124	131606760	(1668549)	C	LTR8	LTR/ERV1	(0)	691	1	988332
551	31.3	11.3	6.9	chr12	132122337	132122655	(1152654)	+	MER46C	DNA/TcMar-Tigger	3	337	(1)	989112
393	14.1	0.0	0.0	chr12	132189953	132190016	(1085293)	+	L1PA6	LINE/L1	6091	6154	(0)	989189
268	28.1	3.3	0.0	chr12	132190020	132190108	(1085201)	C	L1MD3	LINE/L1	(5)	7990	7899	989190
361	26.4	5.5	0.0	chr12	132190290	132190410	(1084899)	C	L1M5	LINE/L1	(697)	5747	5620	989191
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
12	23.3	0.0	0.0	chr13	21542396	21542430	(92821898)	+	(TTTTTG)n	Simple_repeat	1	35	(0)	996300
440	30.5	6.8	0.0	chr13	22915211	22915443	(91448885)	+	L1MEd	LINE/L1	1302	1551	(5535)	998097
1387	11.8	15.7	0.4	chr13	26222671	26222908	(88141420)	C	AluJr	SINE/Alu	(27)	285	5	1002920
2369	8.9	0.0	3.2	chr13	27230588	27230903	(87133425)	C	AluY	SINE/Alu	(5)	306	1	1004548
4492	18.8	7.3	4.2	chr13	27230904	27230954	(87133374)	C	L1MB8	LINE/L1	(1900)	4246	4201	1004545
3019	16.3	10.5	3.6	chr13	27230970	27231605	(87132723)	C	LTR8	LTR/ERV1	(5)	686	2	1004549
191	34.9	3.1	0.0	chr13	27449700	27449762	(86914566)	+	L2b	LINE/L2	3244	3308	(67)	1004968
19	16.7	2.9	6.9	chr13	28451613	28451682	(85912646)	+	G-rich	Low_complexity	1	72	(0)	1006761
646	30.3	7.5	1.6	chr13	28451831	28452145	(85912183)	C	MER102b	DNA/hAT-Charlie	(2)	339	5	1006762
355	30.0	14.4	3.6	chr13	28452234	28452399	(85911929)	+	MIRb	SINE/MIR	22	208	(60)	1006763
4409	16.7	3.5	4.9	chr13	28927685	28929461	(85434867)	+	L1MA3	LINE/L1	4555	6298	(7)	1007502
2119	13.1	3.0	12.9	chr13	29252573	29252975	(85111353)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1007925
3273	16.6	10.0	2.2	chr13	30042113	30042778	(84321550)	+	LTR8A	LTR/ERV1	1	723	(4)	1009020
318	26.3	1.0	1.0	chr13	30042810	30042905	(84321423)	+	L2a	LINE/L2	3270	3365	(61)	1009017
19	2.9	8.6	0.0	chr13	30466110	30466144	(83898184)	+	(AGAGGC)n	Simple_repeat	1	38	(0)	1009745
1475	13.9	5.5	1.1	chr13	30603719	30603980	(83760348)	C	MER2	DNA/TcMar-Tigger	(71)	274	1	1010050
199	18.4	2.0	0.0	chr13	30604035	30604083	(83760245)	C	L2a	LINE/L2	(170)	3256	3207	1010051
220	30.0	2.0	0.0	chr13	30604080	30604129	(83760199)	+	MER91A	DNA/hAT-Tip100	119	169	(27)	1010052
552	26.4	4.2	2.4	chr13	30604160	30604372	(83759956)	C	L2a	LINE/L2	(491)	2928	2712	1010051
666	0.0	0.0	0.0	chr13	30673964	30674037	(83690291)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	1010174
370	23.4	10.3	9.1	chr13	30674562	30674782	(83689546)	C	MER106A	DNA/hAT-Charlie	(11)	225	2	1010175
8902	10.7	3.2	7.1	chr13	31315144	31316433	(83047895)	+	THE1A-int	LTR/ERVL-MaLR	5	1303	(328)	1011143
636	6.7	0.0	0.0	chr13	31316434	31316508	(83047820)	C	AluSq2	SINE/Alu	(18)	295	221	1011144
402	32.4	6.4	3.7	chr13	32464308	32464712	(81899616)	+	LTR33A	LTR/ERVL	100	510	(21)	1012814
661	30.2	9.8	2.3	chr13	32622335	32622815	(81741513)	C	L1ME3A	LINE/L1	(3283)	2863	2343	1013096
3433	19.9	5.2	4.1	chr13	32622831	32623638	(81740690)	C	LTR8B	LTR/ERV1	(20)	800	1	1013111
2999	19.9	13.0	1.5	chr13	38374904	38375626	(75988702)	+	LTR8B	LTR/ERV1	3	820	(0)	1021168
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
2018	14.2	0.3	1.7	chr13	41277130	41277431	(73086897)	C	AluJb	SINE/Alu	(14)	298	1	1025577
3490	12.5	12.8	1.7	chr13	41277432	41277504	(73086824)	+	LTR8A	LTR/ERV1	659	727	(0)	1025576
2715	15.4	6.0	0.0	chr13	41277505	41277965	(73086363)	C	MER21B	LTR/ERVL	(377)	491	1	1025578
9058	10.0	0.7	2.3	chr13	41288584	41289232	(73075096)	+	HSMAR1	DNA/TcMar-Mariner	1	644	(643)	1025597
2279	11.2	0.7	1.0	chr13	41289233	41289535	(73074793)	C	AluSx	SINE/Alu	(10)	302	1	1025598
506	26.1	28.7	5.1	chr13	43110037	43110438	(71253890)	C	MLT1G1	LTR/ERVL-MaLR	(59)	520	9	1028426
11	23.8	8.5	0.0	chr13	43785834	43785892	(70578436)	+	(GTGGCC)n	Simple_repeat	1	64	(0)	1029331
11	27.6	0.0	0.0	chr13	43786271	43786309	(70578019)	+	G-rich	Low_complexity	1	39	(0)	1029332
312	24.3	13.8	0.0	chr13	45938906	45939049	(68425279)	+	L1M8	LINE/L1	2189	2355	(0)	1033111
2846	25.9	8.8	4.5	chr13	45939086	45939220	(68425108)	+	L1MC5	LINE/L1	7683	7809	(1495)	1033114
2218	12.8	0.0	0.0	chr13	45939221	45939525	(68424803)	C	AluSz	SINE/Alu	(6)	306	2	1033115
3154	11.7	4.3	0.0	chr13	46647899	46648386	(67715942)	C	MER1A	DNA/hAT-Charlie	(0)	529	20	1034246
22	12.4	2.2	2.1	chr13	48233085	48233141	(66131187)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	1036514
20	22.2	7.1	1.1	chr13	48233248	48233332	(66130996)	+	(GCAGCCC)n	Simple_repeat	1	91	(0)	1036515
2534	27.3	9.6	2.0	chr13	48356216	48357336	(66006992)	C	HAL1b	LINE/L1	(138)	2283	1069	1036702
273	24.1	1.2	2.5	chr13	48778384	48778464	(65585864)	C	MLT1J-int	LTR/ERVL-MaLR	(58)	1329	1250	1037322
474	22.2	12.9	9.1	chr13	52158799	52159006	(62205322)	+	LTR8B	LTR/ERV1	1	217	(603)	1042686
421	25.2	7.5	1.9	chr13	52159021	52159236	(62205092)	+	LTR8B	LTR/ERV1	449	770	(50)	1042686
229	22.1	0.8	3.2	chr13	52159787	52159872	(62204456)	+	MIRc	SINE/MIR	16	102	(166)	1042687
621	25.0	11.8	6.3	chr13	52159874	52160176	(62204152)	+	MLT1D	LTR/ERVL-MaLR	1	322	(183)	1042688
1913	25.5	4.0	7.0	chr13	55497414	55497621	(58866707)	+	L1MDa	LINE/L1	437	641	(6876)	1047246
5568	21.7	5.4	4.1	chr13	55497616	55497886	(58866442)	+	L1MDa	LINE/L1	954	1226	(5514)	1047246
2670	16.4	7.9	6.8	chr13	57865636	57866224	(56498104)	C	LTR4	LTR/ERV1	(0)	596	1	1050083
16255	15.8	2.6	5.5	chr13	57866225	57866681	(56497647)	+	L1PA15-16	LINE/L1	1568	2028	(4825)	1050082
2460	8.0	1.9	0.0	chr13	58694842	58695143	(55669185)	+	AluSp	SINE/Alu	2	309	(4)	1051083
1198	24.6	4.5	8.4	chr13	58695276	58695786	(55668542)	+	L1MC4a	LINE/L1	5560	6049	(1833)	1051077
1872	16.9	3.8	1.5	chr13	59166315	59166645	(55197683)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1051676
2972	20.4	3.0	2.7	chr13	59166734	59167394	(55196934)	C	LTR8A	LTR/ERV1	(0)	727	65	1051677
6961	17.9	8.6	7.7	chr13	61765292	61767029	(52597299)	C	MER52A	LTR/ERV1	(0)	1755	1	1055165
9346	16.1	3.5	0.8	chr13	63009431	63011011	(51353317)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	1056706
1681	19.3	0.3	2.3	chr13	63022119	63022418	(51341910)	+	AluJo	SINE/Alu	2	295	(17)	1056724
2027	11.7	0.4	1.8	chr13	63189592	63189874	(51174454)	C	AluSx	SINE/Alu	(33)	279	1	1056957
391	0.0	0.0	0.0	chr13	63189880	63189925	(51174403)	+	MADE1	DNA/TcMar-Mariner	35	80	(0)	1056958
3736	17.4	10.4	0.0	chr13	63435584	63436318	(50928010)	C	LTR8B	LTR/ERV1	(0)	820	1	1057274
8897	18.4	2.0	1.2	chr13	64162174	64164766	(50199562)	C	L1PA13	LINE/L1	(3132)	3634	1021	1058191
37	33.5	3.1	3.4	chr13	65330212	65330370	(49033958)	+	(AT)n	Simple_repeat	1	157	(0)	1059668
4945	11.9	3.6	1.1	chr13	65330371	65331186	(49033142)	C	LTR1A2	LTR/ERV1	(0)	837	1	1059669
2070	19.4	16.4	0.5	chr13	65881222	65881648	(48482680)	+	LTR42	LTR/ERVL	1	495	(0)	1060337
2437	21.1	8.5	3.5	chr13	65881677	65882331	(48481997)	C	LTR8	LTR/ERV1	(0)	691	1	1060338
11168	11.4	0.4	0.4	chr13	66276459	66278038	(48086290)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	1060833
240	37.2	7.3	2.0	chr13	66658824	66659018	(47705310)	C	MIRb	SINE/MIR	(6)	262	57	1061300
3614	17.5	17.8	5.7	chr13	67415684	67416618	(46947710)	+	LTR27E	LTR/ERV1	1	1073	(4)	1062246
490	28.1	11.6	4.8	chr13	67416619	67416874	(46947454)	+	L1MEi	LINE/L1	1108	1390	(822)	1062245
2934	33.6	6.6	7.3	chr13	67934496	67936910	(46427418)	+	MER110-int	LTR/ERV1	1386	3712	(3089)	1062891
3845	15.8	2.5	3.2	chr13	68024029	68024755	(46339573)	C	MER50	LTR/ERV1	(12)	722	1	1063003
12	13.7	2.8	5.4	chr13	68027336	68027371	(46336957)	+	(ATTAT)n	Simple_repeat	1	37	(0)	1063005
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
721	34.1	2.7	4.3	chr13	68294756	68295126	(46069202)	C	MLT1J-int	LTR/ERVL-MaLR	(423)	964	600	1063358
420	26.1	2.2	0.7	chr13	68361104	68361238	(46003090)	+	Charlie25	DNA/hAT-Charlie	849	985	(1539)	1063440
5010	30.1	4.0	2.1	chr13	68428652	68430394	(45933934)	C	HERVL74-int	LTR/ERVL	(1004)	4681	3048	1063538
3137	17.9	2.1	6.0	chr13	68540436	68541165	(45823163)	+	L1MA8	LINE/L1	5588	6291	(0)	1063665
2183	15.6	7.0	0.2	chr13	68601915	68602313	(45762015)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1063757
2169	17.6	2.1	1.4	chr13	68602315	68602730	(45761598)	+	MSTA-int	LTR/ERVL-MaLR	2	420	(1231)	1063757
3292	22.5	5.2	2.5	chr13	68895296	68896083	(45468245)	+	LTR8B	LTR/ERV1	3	812	(8)	1064107
15	0.0	0.0	0.0	chr13	69411318	69411334	(44952994)	+	(AC)n	Simple_repeat	1	17	(0)	1064744
13	28.3	0.0	0.0	chr13	69411335	69411360	(44952968)	+	(ACAGAG)n	Simple_repeat	1	43	(0)	1064745
4298	14.0	5.7	0.8	chr13	69411436	69412498	(44951830)	C	L1P4	LINE/L1	(317)	5807	4697	1064746
645	26.6	6.0	0.5	chr13	71082752	71082940	(43281388)	+	UCON31	Unknown	69	268	(186)	1066997
410	31.4	3.2	4.2	chr13	71585351	71585523	(42778805)	C	MIR3	SINE/MIR	(86)	182	9	1067638
336	26.9	6.2	2.9	chr13	73871237	73871427	(40492901)	+	LTR33B	LTR/ERVL	379	618	(2)	1071203
1936	24.8	8.0	1.7	chr13	73981184	73981649	(40382679)	+	L1ME3E	LINE/L1	5552	6048	(194)	1071329
462	16.3	6.1	1.1	chr13	73981652	73981744	(40382584)	+	MLT1A0	LTR/ERVL-MaLR	1	98	(267)	1071336
776	18.3	1.3	1.6	chr13	73981753	73981930	(40382398)	+	MLT1A0	LTR/ERVL-MaLR	224	394	(2)	1071336
689	29.7	8.0	5.7	chr13	74271651	74272054	(40092274)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	97	1071753
12	33.2	4.2	0.0	chr13	75101955	75102026	(39262302)	+	(CTCT)n	Simple_repeat	1	75	(0)	1072841
218	24.1	5.5	1.4	chr13	75416397	75416465	(38947863)	C	L2c	LINE/L2	(3)	3384	3316	1073293
297	30.0	16.4	3.3	chr13	75416575	75416933	(38947395)	C	LTR78	LTR/ERV1	(17)	1287	873	1073294
417	24.7	4.2	2.2	chr13	75476765	75476914	(38887414)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1073403
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
11700	10.2	0.1	0.2	chr13	76067386	76068966	(38295362)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1074265
11267	11.3	0.9	0.2	chr13	76086294	76087912	(38276416)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	1074283
948	24.0	12.2	2.3	chr13	76179709	76180062	(38184266)	+	L1ME1	LINE/L1	4477	4870	(1276)	1074386
3213	17.4	1.1	0.4	chr13	76180069	76180605	(38183723)	+	MER66C	LTR/ERV1	1	541	(14)	1074387
16	4.3	0.0	3.9	chr13	77329420	77329445	(37034883)	+	(CTC)n	Simple_repeat	1	26	(0)	1076038
17	7.9	0.0	0.0	chr13	77699235	77699261	(36665067)	+	(TTAT)n	Simple_repeat	1	27	(0)	1076571
185	29.7	5.9	0.0	chr13	77834480	77834543	(36529785)	+	L2a	LINE/L2	3359	3426	(0)	1076726
1898	15.1	4.5	3.0	chr13	78373039	78373220	(35991108)	C	L1MC	LINE/L1	(703)	5630	5441	1077429
35	0.0	0.0	0.0	chr13	78373221	78373252	(35991076)	+	(TTA)n	Simple_repeat	1	32	(0)	1077430
2206	7.3	0.0	0.0	chr13	78373253	78373511	(35990817)	C	AluY	SINE/Alu	(29)	282	24	1077431
20	25.9	1.4	2.7	chr13	78603413	78603484	(35760844)	+	(GCT)n	Simple_repeat	1	73	(0)	1077764
16	0.0	0.0	0.0	chr13	78659296	78659312	(35705016)	+	(A)n	Simple_repeat	1	17	(0)	1077841
234	35.1	0.0	2.5	chr13	78673291	78673369	(35690959)	+	MamRep4096	DNA/hAT-Tip100	337	413	(13)	1077866
1891	15.4	3.8	6.4	chr13	78673615	78673914	(35690414)	+	THE1B	LTR/ERVL-MaLR	1	301	(63)	1077867
2167	12.4	4.2	0.0	chr13	78673915	78674212	(35690116)	C	AluSz	SINE/Alu	(0)	312	2	1077868
19	26.2	0.0	3.0	chr13	79405803	79405869	(34958459)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	1078870
277	25.0	6.2	0.0	chr13	79406598	79406673	(34957655)	+	Charlie17	DNA/hAT-Charlie	2834	2914	(2)	1078871
1976	16.0	12.4	1.1	chr13	80044087	80044465	(34319863)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1079698
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
2007	15.6	12.1	0.5	chr13	80671500	80671872	(33692456)	C	MSTA	LTR/ERVL-MaLR	(0)	428	7	1080606
12843	10.4	2.1	0.9	chr13	80671879	80673899	(33690429)	C	L1MA1	LINE/L1	(907)	6658	4614	1080604
607	26.9	15.7	3.5	chr13	80682494	80683129	(33681199)	C	HAL1	LINE/L1	(760)	1747	1013	1080612
11815	8.7	0.1	1.3	chr13	80809350	80811016	(33553312)	C	L1PA7	LINE/L1	(1159)	4987	3341	1080768
22	15.8	0.0	0.0	chr13	83881748	83881783	(30482545)	+	A-rich	Low_complexity	1	36	(0)	1084513
984	14.9	2.6	0.0	chr13	84787554	84787701	(29576627)	+	LTR8	LTR/ERV1	540	691	(0)	1085698
7371	16.6	3.5	2.5	chr13	84787702	84788927	(29575401)	+	HUERS-P1-int	LTR/ERV1	1	1250	(5013)	1085698
8033	18.4	1.5	0.4	chr13	85026852	85028264	(29336064)	C	MSTA-int	LTR/ERVL-MaLR	(201)	1430	2	1086001
919	12.3	4.9	0.7	chr13	85028266	85028420	(29335908)	C	MSTA	LTR/ERVL-MaLR	(0)	428	267	1086001
9900	12.6	3.0	2.7	chr13	85849543	85851117	(28513211)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1087071
2265	12.6	4.1	0.0	chr13	85851118	85851466	(28512862)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1087071
9451	16.3	2.1	0.4	chr13	86802470	86804072	(27560256)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	1088180
1593	19.5	11.4	1.3	chr13	86804073	86804456	(27559872)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1088180
683	32.5	8.7	2.3	chr13	87124037	87124421	(27239907)	C	MamRTE1	LINE/RTE-BovB	(100)	3712	3301	1088601
746	24.4	6.3	8.9	chr13	87124614	87125005	(27239323)	C	MLT2C2	LTR/ERVL	(2)	462	82	1088602
2177	16.8	2.1	8.3	chr13	87939646	87939866	(26424462)	+	MSTB	LTR/ERVL-MaLR	1	205	(221)	1089691
3673	5.7	0.2	1.2	chr13	87939867	87940347	(26423981)	+	L1PA7	LINE/L1	5669	6144	(10)	1089692
9690	24.8	9.3	8.0	chr13	88148372	88152093	(26212235)	C	MER66-int	LTR/ERV1	(2261)	4415	644	1089952
3048	20.4	3.8	2.7	chr13	89221713	89222448	(25141880)	C	LTR8B	LTR/ERV1	(21)	799	1	1091319
3657	16.2	2.9	3.8	chr13	89412222	89412941	(24951387)	+	LTR8A	LTR/ERV1	1	714	(13)	1091565
6289	16.9	1.0	0.1	chr13	90047142	90048153	(24316175)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	611	1092440
3407	26.8	4.5	4.1	chr13	90048163	90049293	(24315035)	C	L1M1	LINE/L1	(5741)	1824	14	1092439
9622	12.6	3.7	4.0	chr13	90546834	90548398	(23815930)	C	THE1B-int	LTR/ERVL-MaLR	(7)	1573	13	1093056
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
2243	22.8	7.2	0.0	chr13	91739377	91739877	(22624451)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	7	1094683
1697	19.1	1.8	7.0	chr13	92761346	92761838	(21602490)	C	L1M2a	LINE/L1	(3656)	3906	3442	1095981
1022	25.6	9.1	2.2	chr13	92761836	92762444	(21601884)	+	L1M2a	LINE/L1	2780	3441	(4124)	1095981
1924	11.3	3.4	3.1	chr13	94596564	94596855	(19767473)	C	AluJb	SINE/Alu	(19)	293	1	1098574
2524	8.1	0.3	0.0	chr13	95425509	95425818	(18938510)	+	AluSp	SINE/Alu	1	311	(2)	1100087
1812	27.2	5.5	9.1	chr13	95425819	95425955	(18938373)	+	L1ME3E	LINE/L1	1418	1522	(5581)	1100081
2444	16.5	1.0	6.2	chr13	95425956	95426467	(18937861)	C	MER31A	LTR/ERV1	(0)	485	1	1100088
2325	22.9	4.7	5.8	chr13	95843029	95843492	(18520836)	C	L1ME2	LINE/L1	(421)	5743	5265	1100751
4289	22.9	5.6	5.5	chr13	95843490	95843945	(18520383)	C	L1M4	LINE/L1	(1006)	5140	4687	1100753
5833	7.4	3.5	0.3	chr13	96051469	96052478	(18311850)	+	L1PB1	LINE/L1	5835	6867	(0)	1101022
1373	34.5	9.2	3.7	chr13	96894741	96895379	(17468949)	C	L2b	LINE/L2	(585)	2834	2141	1102216
2749	16.6	11.4	6.7	chr13	96895380	96896069	(17468259)	C	LTR8A	LTR/ERV1	(0)	727	1	1102218
2782	24.7	6.0	4.2	chr13	96962887	96964603	(17399725)	+	L1ME1	LINE/L1	4443	6173	(6)	1102310
15	20.5	0.0	0.0	chr13	99501645	99501678	(14862650)	+	(GCT)n	Simple_repeat	1	34	(0)	1106362
852	18.2	2.4	2.4	chr13	105107162	105107345	(9256983)	C	MER57B2	LTR/ERV1	(259)	175	5	1114310
554	13.5	0.0	0.0	chr13	105107433	105107528	(9256800)	+	L1MC3	LINE/L1	3932	4027	(2119)	1114312
2854	18.3	11.3	2.7	chr13	105107530	105108192	(9256136)	C	LTR8A	LTR/ERV1	(0)	727	1	1114313
15688	14.1	4.0	1.9	chr13	109613341	109615583	(4748745)	C	Tigger4	DNA/TcMar-Tigger	(0)	2731	415	1120283
258	24.7	7.3	1.1	chr13	113153757	113153846	(1210482)	+	L1MB4	LINE/L1	6085	6180	(0)	1124252
2176	4.0	0.0	0.0	chr14	19668195	19668466	(87375252)	+	L1PA6	LINE/L1	5515	5786	(368)	1127019
16	28.9	0.0	3.2	chr14	19668474	19668535	(87375183)	+	(GCG)n	Simple_repeat	1	62	(0)	1127020
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
624	2.7	0.0	0.0	chr14	20613790	20613862	(86429856)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	1128344
41	23.3	6.2	0.0	chr14	20624562	20624690	(86419028)	+	GA-rich	Low_complexity	1	137	(0)	1128365
12	8.1	3.6	3.5	chr14	21070690	21070717	(85973001)	+	(CTGTC)n	Simple_repeat	1	29	(0)	1129045
3613	14.2	12.1	5.4	chr14	22738252	22738627	(84305091)	+	LTR8B	LTR/ERV1	411	819	(1)	1131601
21	0.0	0.0	0.0	chr14	22738652	22738674	(84305044)	+	(A)n	Simple_repeat	1	23	(0)	1131604
4745	13.1	5.0	2.8	chr14	22738741	22738956	(84304762)	C	LTR39	LTR/ERV1	(1)	782	567	1131605
35	14.5	3.8	2.4	chr14	23321464	23321543	(83722175)	+	(GCG)n	Simple_repeat	1	83	(0)	1132700
12	21.1	0.0	10.4	chr14	23321615	23321681	(83722037)	+	(GCCTGA)n	Simple_repeat	1	67	(0)	1132701
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
27	22.9	0.9	7.1	chr14	26598275	26598385	(80445333)	+	G-rich	Low_complexity	1	112	(0)	1137004
274	33.3	10.3	5.3	chr14	27017230	27017476	(80026242)	C	MIR	SINE/MIR	(0)	262	2	1137558
225	23.3	4.0	6.4	chr14	27017721	27017798	(80025920)	C	L2a	LINE/L2	(0)	3426	3351	1137559
2023	30.1	5.7	1.9	chr14	27671928	27672937	(79370781)	+	L1M4a1	LINE/L1	449	1499	(1080)	1138325
27444	2.7	0.1	0.2	chr14	27673060	27679095	(79364623)	+	L1PA3	LINE/L1	125	6155	(0)	1138326
12	21.8	1.9	5.6	chr14	28766597	28766649	(78277069)	+	G-rich	Low_complexity	1	54	(0)	1139687
21	0.0	3.1	3.0	chr14	28766883	28766914	(78276804)	+	(GCT)n	Simple_repeat	1	33	(0)	1139688
19	24.7	0.0	1.8	chr14	28766917	28766942	(78276776)	+	GA-rich	Low_complexity	1	53	(0)	1139689
18	12.0	0.0	0.0	chr14	28766943	28766969	(78276749)	+	(G)n	Simple_repeat	1	27	(0)	1139690
28	8.9	0.0	3.9	chr14	28767021	28767072	(78276646)	+	(TTTTTTC)n	Simple_repeat	1	52	(0)	1139691
30	18.9	4.1	4.0	chr14	28767162	28767258	(78276460)	+	(GCC)n	Simple_repeat	1	101	(0)	1139692
1905	18.1	7.3	0.0	chr14	30527153	30527483	(76516235)	C	LTR18A	LTR/ERVL	(0)	357	1	1141938
15789	21.7	0.8	0.9	chr14	30527560	30530363	(76513355)	C	HERVL18-int	LTR/ERVL	(106)	5941	3141	1141939
352	25.7	2.8	9.7	chr14	30988904	30989058	(76054660)	C	MIRc	SINE/MIR	(114)	154	11	1142655
2459	6.7	1.0	0.3	chr14	30989457	30989755	(76053963)	C	AluYf1	SINE/Alu	(8)	303	3	1142656
6994	7.7	0.3	0.2	chr14	34427172	34428053	(72615665)	+	THE1B-int	LTR/ERVL-MaLR	698	1580	(0)	1147774
2327	11.8	6.9	2.0	chr14	34428054	34428399	(72615319)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1147774
4118	8.0	1.1	2.7	chr14	35035866	35036235	(72007483)	C	THE1B-int	LTR/ERVL-MaLR	(1218)	362	1	1149215
2251	14.0	3.6	2.2	chr14	35036236	35036592	(72007126)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	1149215
20	0.0	0.0	6.2	chr14	41606859	41606890	(65436828)	+	(GCC)n	Simple_repeat	1	32	(0)	1158309
17	17.4	2.0	4.0	chr14	41606965	41607013	(65436705)	+	(CCCGGC)n	Simple_repeat	1	50	(0)	1158310
17	24.4	0.0	0.0	chr14	41607135	41607173	(65436545)	+	(TG)n	Simple_repeat	1	39	(0)	1158311
22	14.0	2.0	2.0	chr14	45083981	45084029	(61959689)	+	G-rich	Low_complexity	1	50	(0)	1162631
540	15.7	13.0	0.7	chr14	49581374	49581508	(57462210)	+	L2	LINE/L2	2412	2565	(854)	1168196
249	17.4	9.8	0.0	chr14	49581509	49581554	(57462164)	C	FRAM	SINE/Alu	(26)	150	100	1168197
279	10.9	14.8	0.0	chr14	49581554	49581599	(57462119)	C	Alu	SINE/Alu	(119)	183	130	1168198
433	14.1	0.0	0.0	chr14	49581615	49581678	(57462040)	C	AluJo	SINE/Alu	(248)	64	1	1168199
273	26.7	1.1	10.0	chr14	50321259	50321358	(56722360)	C	MIR3	SINE/MIR	(25)	183	93	1169766
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
272	31.4	5.6	1.9	chr14	50408339	50408442	(56635276)	+	MIRb	SINE/MIR	5	112	(156)	1169935
32419	5.6	0.8	0.1	chr14	52168473	52172109	(54871609)	+	HERVK9-int	LTR/ERVK	2357	6021	(0)	1172536
3165	9.4	4.2	0.0	chr14	52172122	52172577	(54871141)	+	MER9a3	LTR/ERVK	37	512	(0)	1172538
1312	13.2	5.8	2.7	chr14	52551273	52551491	(54492227)	+	AluJb	SINE/Alu	82	307	(5)	1173109
805	22.6	2.8	8.2	chr14	52792207	52792437	(54251281)	+	MER20	DNA/hAT-Charlie	1	218	(1)	1173518
2276	18.0	3.1	0.2	chr14	52832119	52832520	(54211198)	+	MLT2C2	LTR/ERVL	3	418	(46)	1173620
56	0.0	0.0	0.0	chr14	52832521	52832568	(54211150)	+	(GT)n	Simple_repeat	1	48	(0)	1173621
12	16.9	2.9	2.8	chr14	53153332	53153366	(53890352)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1174114
6756	13.9	0.7	1.2	chr14	54012572	54013610	(53030108)	C	L1MC1	LINE/L1	(1)	6332	5298	1175342
907	25.1	10.8	9.3	chr14	54356175	54356711	(52687007)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	3	1175811
34	2.9	0.0	0.0	chr14	54489119	54489154	(52554564)	+	(T)n	Simple_repeat	1	36	(0)	1175997
1740	18.5	1.0	0.3	chr14	55316446	55316737	(51726981)	+	AluJb	SINE/Alu	2	295	(17)	1177477
414	27.9	2.8	0.0	chr14	55316745	55316848	(51726870)	C	MER45R	DNA/hAT-Tip100	(1474)	107	1	1177478
904	22.4	11.7	4.5	chr14	55316865	55317173	(51726545)	C	HAL1	LINE/L1	(1595)	912	579	1177474
301	32.9	9.4	3.1	chr14	56967758	56967986	(50075732)	C	L2	LINE/L2	(470)	2949	2705	1180040
240	32.5	7.0	0.0	chr14	59761741	59761820	(47281898)	C	MER91A	DNA/hAT-Tip100	(1)	195	110	1184127
26	26.5	0.0	3.4	chr14	59761997	59762084	(47281634)	+	(TGTGG)n	Simple_repeat	1	88	(0)	1184128
309	25.7	0.0	1.3	chr14	59762256	59762330	(47281388)	+	MIRb	SINE/MIR	92	165	(103)	1184129
592	30.4	5.9	2.4	chr14	59762320	59762565	(47281153)	C	MIR	SINE/MIR	(0)	262	8	1184130
35	21.3	5.3	3.6	chr14	60249116	60249248	(46794470)	+	(GCG)n	Simple_repeat	1	140	(0)	1184789
21	20.1	3.0	2.9	chr14	64465366	64465431	(42578287)	+	(CCCCG)n	Simple_repeat	1	68	(0)	1191351
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
835	25.9	5.2	2.0	chr14	66082631	66082874	(40960844)	+	MIR	SINE/MIR	8	259	(3)	1194124
667	8.0	0.0	0.0	chr14	67260227	67260314	(39783404)	+	5S	rRNA	2	89	(32)	1195727
9957	11.0	5.1	3.9	chr14	68101247	68102806	(38940912)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1197220
547	28.1	5.3	0.0	chr14	69299342	69299519	(37744199)	C	LTR16	LTR/ERVL	(2)	436	249	1199256
310	28.5	15.0	3.2	chr14	69299543	69299745	(37743973)	C	MIRb	SINE/MIR	(35)	233	2	1199257
2237	9.5	0.3	0.7	chr14	69397637	69397930	(37645788)	+	AluSx1	SINE/Alu	1	293	(19)	1199444
842	16.2	0.0	0.0	chr14	69726502	69726637	(37317081)	+	AluJb	SINE/Alu	177	312	(0)	1200081
1004	21.2	19.1	1.3	chr14	69727318	69727700	(37316018)	C	MLT1C	LTR/ERVL-MaLR	(0)	505	39	1200082
16	9.3	0.0	0.0	chr14	70416307	70416329	(36627389)	+	(T)n	Simple_repeat	1	23	(0)	1201178
181	27.1	4.0	0.0	chr14	70416330	70416377	(36627341)	+	MER5B	DNA/hAT-Charlie	125	174	(4)	1201179
210	20.5	0.0	0.0	chr14	70416385	70416423	(36627295)	+	MIR3	SINE/MIR	156	194	(14)	1201180
1986	21.7	13.1	1.0	chr14	70417283	70417906	(36625812)	C	MER67C	LTR/ERV1	(0)	711	1	1201181
10459	11.1	3.8	0.4	chr14	70943153	70944673	(36099045)	+	THE1C-int	LTR/ERVL-MaLR	1	1574	(6)	1202016
17	19.8	0.0	2.3	chr14	74019488	74019530	(33024188)	+	(AAGGCA)n	Simple_repeat	1	43	(0)	1207613
13	19.4	4.8	8.1	chr14	74882086	74882168	(32161550)	+	(GGCCG)n	Simple_repeat	1	87	(0)	1209340
2085	13.6	1.6	0.0	chr14	75321384	75321691	(31722027)	C	AluSq	SINE/Alu	(0)	313	1	1210208
2857	20.8	12.9	0.3	chr14	75321935	75322719	(31720999)	+	MER63C	DNA/hAT-Blackjack	31	930	(0)	1210209
31	0.0	0.0	0.0	chr14	77027305	77027333	(30016385)	+	(GCG)n	Simple_repeat	1	29	(0)	1213464
58	4.8	0.0	0.0	chr14	77027419	77027483	(30016235)	+	(TGC)n	Simple_repeat	1	65	(0)	1213465
23	17.4	0.0	0.0	chr14	77027487	77027531	(30016187)	+	(CGC)n	Simple_repeat	1	45	(0)	1213466
19	7.8	4.5	4.3	chr14	77040280	77040323	(30003395)	+	GA-rich	Low_complexity	1	46	(0)	1213492
4464	16.1	2.5	1.2	chr14	77091327	77091655	(29952063)	C	MER72B	LTR/ERV1	(5)	763	430	1213600
4586	13.9	6.3	5.1	chr14	77091656	77092114	(29951604)	C	LTR8B	LTR/ERV1	(0)	820	311	1213601
2443	8.2	0.3	0.0	chr14	77092115	77092418	(29951300)	C	AluSp	SINE/Alu	(8)	305	1	1213602
5851	19.4	2.7	4.3	chr14	88168066	88169390	(18874328)	+	L1PB4	LINE/L1	998	2069	(5146)	1230023
263	28.7	16.1	0.9	chr14	88562652	88562767	(18480951)	C	MIRb	SINE/MIR	(116)	152	16	1230628
15	34.0	1.1	3.2	chr14	88562934	88563026	(18480692)	+	G-rich	Low_complexity	1	94	(0)	1230629
6031	13.3	3.6	5.4	chr14	90011284	90012291	(17031427)	+	THE1B-int	LTR/ERVL-MaLR	3	992	(639)	1233095
2093	13.0	0.7	0.3	chr14	90012290	90012590	(17031128)	C	THE1-int	LTR/ERVL-MaLR	(453)	1127	826	1233096
5128	9.4	0.0	0.3	chr14	90012601	90013270	(17030448)	+	THE1B-int	LTR/ERVL-MaLR	913	1580	(0)	1233095
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
15	21.9	0.0	6.7	chr14	90397289	90397295	(16646423)	+	(TTTTTTG)n	Simple_repeat	1	13	(47)	1233835
16	3.4	6.2	2.9	chr14	90397296	90397327	(16646391)	+	(TTGT)n	Simple_repeat	1	34	(0)	1233836
15	21.9	0.0	6.7	chr14	90397328	90397348	(16646370)	+	(TTTTTTG)n	Simple_repeat	14	60	(0)	1233835
20	27.5	0.0	3.0	chr14	92748493	92748559	(14295159)	+	(GGC)n	Simple_repeat	1	67	(0)	1238154
5005	11.3	12.8	0.7	chr14	92785552	92786292	(14257426)	C	LTR25	LTR/ERV1	(0)	844	1	1238239
2709	22.1	6.8	6.4	chr14	92786293	92786623	(14257095)	+	LTR8B	LTR/ERV1	483	820	(0)	1238237
712	24.5	8.0	5.6	chr14	92786628	92786930	(14256788)	C	L1ME4b	LINE/L1	(232)	660	350	1238240
1837	17.4	8.0	1.9	chr14	92892409	92893091	(14150627)	+	LTR8B	LTR/ERV1	1	818	(2)	1238449
1140	19.4	13.4	2.7	chr14	92893126	92893538	(14150180)	+	LTR54B	LTR/ERV1	33	496	(2)	1238450
24	22.4	1.3	3.8	chr14	93115402	93115479	(13928239)	+	(CCGC)n	Simple_repeat	1	79	(0)	1238816
18	18.4	4.1	0.0	chr14	93115477	93115525	(13928193)	+	(GGCTGA)n	Simple_repeat	1	51	(0)	1238817
39	24.7	0.8	3.2	chr14	93332834	93332955	(13710763)	+	(CCG)n	Simple_repeat	1	123	(0)	1239313
24	13.1	5.4	5.1	chr14	94174232	94174305	(12869413)	+	(CCCCG)n	Simple_repeat	1	78	(0)	1240752
12	0.0	0.0	5.0	chr14	94174472	94174491	(12869227)	+	(CCG)n	Simple_repeat	1	20	(0)	1240753
209	33.8	7.5	0.0	chr14	96016872	96016945	(11026773)	+	L2a	LINE/L2	3345	3424	(2)	1244095
461	31.9	11.3	4.4	chr14	96017023	96017838	(11025880)	+	L2c	LINE/L2	2331	3326	(61)	1244096
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
327	31.6	2.5	7.6	chr14	99454977	99455147	(7588571)	C	MIRb	SINE/MIR	(104)	164	3	1250066
15	17.6	0.0	4.8	chr14	99604696	99604737	(7438981)	+	(CCCCGT)n	Simple_repeat	1	42	(0)	1250259
2473	8.0	0.0	1.3	chr14	103029575	103029887	(4013831)	+	AluSc	SINE/Alu	1	309	(0)	1256065
2189	23.8	4.0	7.8	chr14	103256884	103257539	(3786179)	+	LTR8	LTR/ERV1	69	691	(0)	1256441
1764	20.4	0.6	1.3	chr14	103257579	103257892	(3785826)	+	AluJb	SINE/Alu	1	312	(0)	1256444
244	22.1	9.7	3.7	chr14	104404755	104404890	(2638828)	+	L1ME3G	LINE/L1	117	261	(663)	1258397
904	31.4	4.4	0.3	chr14	104404942	104405244	(2638474)	+	MLT1I	LTR/ERVL-MaLR	96	411	(0)	1258398
812	21.6	2.9	5.7	chr14	105188230	105188376	(1855342)	C	HAL1	LINE/L1	(782)	1725	1587	1259370
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
21	10.4	0.0	6.4	chr15	22786608	22786654	(79204535)	+	G-rich	Low_complexity	1	47	(0)	1266289
29	3.2	0.0	0.0	chr15	22786672	22786703	(79204486)	+	(GCG)n	Simple_repeat	1	32	(0)	1266290
26	20.3	7.8	0.0	chr15	22786839	22786928	(79204261)	+	(GGCAGGC)n	Simple_repeat	1	97	(0)	1266291
24	29.7	4.5	0.0	chr15	22786929	22786948	(79204241)	+	G-rich	Low_complexity	1	115	(0)	1266292
2907	1.3	0.0	0.0	chr15	31169242	31169551	(70821638)	+	AluYb8	SINE/Alu	1	310	(8)	1278210
182	28.7	21.9	2.0	chr15	31169760	31169912	(70821277)	+	MIRc	SINE/MIR	64	255	(13)	1278211
1301	22.0	6.2	0.9	chr15	31170076	31170396	(70820793)	C	MER70B	LTR/ERVL	(236)	342	4	1278212
2334	7.3	0.7	0.0	chr15	31356272	31356560	(70634629)	+	AluSx1	SINE/Alu	1	291	(21)	1278490
1883	11.9	2.6	3.6	chr15	31356561	31356617	(70634572)	C	L1PA15	LINE/L1	(245)	5920	5864	1278489
638	30.4	14.0	6.0	chr15	31356618	31357490	(70633699)	C	HAL1	LINE/L1	(843)	1664	728	1278488
1880	12.5	3.4	6.3	chr15	35328761	35329126	(66662063)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	1284251
14	20.2	0.0	0.0	chr15	41774508	41774541	(60216648)	+	(CTGCCG)n	Simple_repeat	1	34	(0)	1294072
17	14.2	0.0	0.0	chr15	42581660	42581690	(59409499)	+	(CAG)n	Simple_repeat	1	31	(0)	1295404
2152	14.5	0.0	0.0	chr15	45596194	45596497	(56394692)	C	AluJb	SINE/Alu	(8)	304	1	1301005
5657	15.8	3.1	7.8	chr15	45596498	45596684	(56394505)	C	L1MC	LINE/L1	(1231)	4915	4757	1301003
2051	12.1	2.0	0.0	chr15	45596685	45596974	(56394215)	C	AluSx	SINE/Alu	(16)	296	1	1301006
16	23.0	6.7	2.5	chr15	52427762	52427836	(49563353)	+	GA-rich	Low_complexity	1	80	(0)	1311271
189	20.0	0.0	0.0	chr15	52428051	52428085	(49563104)	+	L2	LINE/L2	2230	2264	(1155)	1311272
200	25.9	7.6	5.6	chr15	53659009	53659098	(48332091)	C	UCON71_Crp	Unknown	(2)	275	184	1313106
10004	9.7	8.4	1.4	chr15	56231623	56233091	(45758098)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1316873
4651	12.2	7.7	2.2	chr15	57019328	57020101	(44971088)	C	LTR8B	LTR/ERV1	(0)	820	1	1318028
14160	9.0	1.6	0.2	chr15	58315109	58317552	(43673637)	C	L1PA11	LINE/L1	(8)	6166	3696	1319962
12	19.9	0.0	8.3	chr15	58771059	58771106	(43220083)	+	(GCCC)n	Simple_repeat	1	48	(0)	1320768
1199	14.6	5.0	0.0	chr15	59529185	59529376	(42461813)	+	LTR8	LTR/ERV1	1	202	(489)	1322241
2215	9.9	0.0	5.6	chr15	60257095	60257417	(41733772)	C	AluSz	SINE/Alu	(7)	305	1	1323495
226	37.3	6.6	11.5	chr15	60257455	60257831	(41733358)	C	L3	LINE/CR1	(43)	4056	3699	1323496
2333	10.5	3.8	8.0	chr15	60257832	60258098	(41733091)	+	MER57B1	LTR/ERV1	1	259	(142)	1323497
370	25.5	9.1	4.3	chr15	63093961	63094075	(38897114)	+	MIRb	SINE/MIR	78	198	(70)	1327937
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
180	26.1	8.0	0.0	chr15	66091418	66091463	(35899726)	+	L3	LINE/CR1	3501	3550	(549)	1333963
614	28.5	7.1	3.7	chr15	66091479	66091722	(35899467)	+	MIR	SINE/MIR	6	258	(4)	1333964
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
12	12.2	3.7	0.0	chr15	66387261	66387287	(35603902)	+	(GCGCA)n	Simple_repeat	1	28	(0)	1334598
247	35.3	5.5	0.8	chr15	66497390	66497509	(35493680)	+	MER5A	DNA/hAT-Charlie	63	188	(1)	1334818
2539	15.9	5.3	4.9	chr15	67868596	67869354	(34121835)	+	MER21A	LTR/ERVL	1	883	(48)	1337268
403	31.8	5.6	0.8	chr15	67869379	67869635	(34121554)	+	L1M5	LINE/L1	5004	5273	(873)	1337265
2305	11.0	1.0	0.0	chr15	68148425	68148725	(33842464)	C	AluSg4	SINE/Alu	(6)	304	1	1337817
769	31.5	12.8	7.5	chr15	68148726	68149074	(33842115)	C	L2a	LINE/L2	(537)	2882	2494	1337816
29	0.0	0.0	3.1	chr15	68149075	68149106	(33842083)	+	(TGTTT)n	Simple_repeat	1	32	(0)	1337818
769	31.5	12.8	7.5	chr15	68149107	68149297	(33841892)	C	L2a	LINE/L2	(926)	2493	2297	1337816
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
39	30.9	2.7	2.1	chr15	68229676	68229860	(33761329)	+	G-rich	Low_complexity	1	190	(0)	1337961
1621	20.8	0.8	0.0	chr15	71926427	71926690	(30064499)	+	AluJb	SINE/Alu	1	266	(46)	1344574
18	30.1	0.0	1.6	chr15	72117939	72118001	(29873188)	+	(CCG)n	Simple_repeat	1	63	(0)	1344929
38	6.4	0.0	0.0	chr15	72320477	72320525	(29670664)	+	(GCACACACAG)n	Simple_repeat	1	49	(0)	1345249
19	6.3	2.9	2.8	chr15	72474428	72474462	(29516727)	+	(CCCT)n	Simple_repeat	1	36	(0)	1345546
21	19.5	3.3	1.6	chr15	72474519	72474578	(29516611)	+	(CGGAGC)n	Simple_repeat	1	62	(0)	1345547
25	27.0	1.0	4.0	chr15	72474642	72474752	(29516437)	+	(GGACGA)n	Simple_repeat	1	107	(0)	1345548
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
19	21.5	1.5	4.5	chr15	74956809	74956873	(27034316)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1349865
14	10.3	3.0	2.9	chr15	74956911	74956943	(27034246)	+	G-rich	Low_complexity	1	34	(0)	1349866
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
18	16.4	2.4	0.0	chr15	75454670	75454710	(26536479)	+	(CGCGCC)n	Simple_repeat	1	42	(0)	1350823
226	15.0	2.4	0.0	chr15	76962170	76962209	(25028980)	+	MER91C	DNA/hAT-Tip100	65	105	(35)	1353306
930	26.4	13.5	1.7	chr15	76962327	76962973	(25028216)	+	L2a	LINE/L2	2548	3314	(112)	1353307
489	29.8	8.8	1.2	chr15	78061945	78062195	(23928994)	+	Helitron3Na_Mam	RC/Helitron	199	470	(16)	1355125
372	24.4	1.1	1.1	chr15	79179268	79179354	(22811835)	+	MIRc	SINE/MIR	99	185	(83)	1357393
1275	32.0	11.1	5.9	chr15	79697132	79698772	(22292417)	+	L2b	LINE/L2	1625	3375	(0)	1358238
2797	13.2	3.1	0.5	chr15	81190635	81191074	(20800115)	C	LTR47A	LTR/ERVL	(0)	452	1	1360878
218	32.8	5.5	7.0	chr15	81191075	81191120	(20800069)	+	MIRb	SINE/MIR	229	268	(0)	1360877
4218	12.4	5.2	1.1	chr15	81449634	81450350	(20540839)	+	Tigger3b	DNA/TcMar-Tigger	484	1231	(0)	1361303
12	14.1	0.0	8.1	chr15	82647385	82647421	(19343768)	+	(CCCG)n	Simple_repeat	1	37	(0)	1363212
18	13.5	0.0	6.5	chr15	82648055	82648100	(19343089)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1363213
293	31.3	3.3	2.0	chr15	83364262	83364411	(18626778)	+	Tigger15a	DNA/TcMar-Tigger	551	702	(13)	1364511
31	5.8	0.0	0.0	chr15	83364484	83364519	(18626670)	+	(AC)n	Simple_repeat	1	36	(0)	1364512
15	18.7	0.0	0.0	chr15	83364611	83364642	(18626547)	+	(TGAA)n	Simple_repeat	1	32	(0)	1364513
28	3.3	0.0	0.0	chr15	84571038	84571068	(17420121)	+	(CCCTCAC)n	Simple_repeat	1	31	(0)	1366184
1012	30.2	8.7	3.7	chr15	84872014	84872720	(17118469)	C	ERVL-E-int	LTR/ERVL	(2107)	3547	2787	1366788
13	6.9	9.7	0.0	chr15	85854435	85854465	(16136724)	+	A-rich	Low_complexity	1	34	(0)	1368499
20	7.8	0.0	0.0	chr15	85854629	85854655	(16136534)	+	(GT)n	Simple_repeat	1	27	(0)	1368500
1094	25.8	4.2	0.6	chr15	88913659	88914001	(13077188)	+	L1ME4b	LINE/L1	131	486	(406)	1373236
483	20.6	11.9	11.4	chr15	89017812	89017986	(12973203)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	1373468
2136	23.6	6.4	1.7	chr15	89537941	89538594	(12452595)	+	L1MEd	LINE/L1	990	1676	(5410)	1374413
848	12.3	0.0	0.0	chr15	89538605	89538718	(12452471)	+	AluJo	SINE/Alu	12	125	(187)	1374414
3264	18.8	6.5	9.3	chr15	90114203	90114883	(11876306)	+	LTR8B	LTR/ERV1	161	820	(0)	1375637
4179	18.8	1.9	2.2	chr15	93927107	93928005	(8063184)	C	L1MA10	LINE/L1	(7)	6327	5432	1382359
192	20.6	1.9	7.5	chr15	94524410	94524472	(7466717)	C	L2c	LINE/L2	(0)	3426	3337	1383136
3910	13.7	9.2	9.4	chr15	94524511	94525331	(7465858)	C	LTR8B	LTR/ERV1	(0)	820	2	1383137
1884	14.8	5.9	5.6	chr15	95200251	95200623	(6790566)	+	THE1C	LTR/ERVL-MaLR	2	375	(0)	1384098
949	27.1	8.9	5.1	chr15	96685363	96686046	(5305143)	+	L1ME3Cz	LINE/L1	4807	5398	(748)	1386231
326	25.0	6.4	0.0	chr15	96686188	96686275	(5304914)	C	MER5A	DNA/hAT-Charlie	(95)	94	1	1386233
1060	22.7	13.1	11.7	chr15	96686276	96686574	(5304615)	+	L1ME3Cz	LINE/L1	392	726	(271)	1386231
11210	10.8	1.3	0.1	chr15	97986332	97987890	(4003299)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	1387940
1774	20.1	8.1	1.1	chr15	100989424	100989791	(1001398)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1392196
22	17.2	1.9	1.8	chr15	100989831	100989884	(1001305)	+	(GTTTTT)n	Simple_repeat	1	55	(0)	1392197
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
2416	11.5	13.5	2.6	chr16	278988	279415	(90058930)	+	MER51E	LTR/ERV1	1	482	(0)	1394518
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
1179	7.8	6.7	0.0	chr16	1423989	1424142	(88914203)	+	AluSp	SINE/Alu	140	304	(9)	1395901
653	24.6	0.6	1.2	chr16	1424179	1424351	(88913994)	+	LTR8B	LTR/ERV1	649	820	(0)	1395902
1013	17.5	0.0	2.3	chr16	1424410	1424568	(88913777)	C	AluJr	SINE/Alu	(20)	292	137	1395903
13	11.1	9.3	5.1	chr16	2752706	2752759	(87585586)	+	(GAGGC)n	Simple_repeat	1	59	(0)	1397879
182	32.5	5.7	3.5	chr16	2861233	2861318	(87477027)	C	L2c	LINE/L2	(0)	3387	3300	1398044
353	27.6	1.1	0.0	chr16	2861321	2861407	(87476938)	C	L2a	LINE/L2	(1)	3425	3338	1398045
3295	14.5	1.4	5.9	chr16	2861444	2861816	(87476529)	+	L1PB4	LINE/L1	5552	5913	(243)	1398046
1907	13.5	0.0	8.0	chr16	2861817	2862141	(87476204)	C	AluSc	SINE/Alu	(10)	299	1	1398047
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
2278	9.2	1.6	0.7	chr16	3288636	3288941	(87049404)	C	AluSp	SINE/Alu	(3)	310	2	1398910
750	28.9	2.1	3.3	chr16	3610416	3610658	(86727687)	C	MIR	SINE/MIR	(3)	259	20	1399482
328	34.0	7.7	0.0	chr16	3610665	3610808	(86727537)	+	L2a	LINE/L2	3271	3426	(0)	1399483
1647	25.1	2.7	0.5	chr16	4168943	4169343	(86169002)	+	MLT1E2	LTR/ERVL-MaLR	218	627	(0)	1400596
621	26.2	13.1	5.3	chr16	10368967	10369301	(79969044)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	142	1413359
1075	23.1	15.2	14.6	chr16	10369306	10369497	(79968848)	C	LTR8B	LTR/ERV1	(0)	820	648	1413360
2050	15.9	0.7	0.0	chr16	10369498	10369805	(79968540)	C	AluSx1	SINE/Alu	(2)	310	1	1413361
8262	6.8	1.0	0.5	chr16	13904707	13905708	(76432637)	+	LTR13	LTR/ERVK	1	1007	(0)	1421123
401	30.8	5.4	4.1	chr16	14070771	14070990	(76267355)	+	MIRb	SINE/MIR	15	237	(31)	1421470
31	13.4	0.0	3.3	chr16	14071327	14071387	(76266958)	+	(GCG)n	Simple_repeat	1	61	(0)	1421471
24	29.2	0.0	5.8	chr16	14071388	14071446	(76266899)	+	G-rich	Low_complexity	1	120	(0)	1421472
13	7.6	1.5	7.6	chr16	14071539	14071573	(76266772)	+	G-rich	Low_complexity	1	32	(0)	1421473
1381	14.5	6.6	5.6	chr16	19087031	19087188	(71251157)	C	AluJr	SINE/Alu	(8)	304	135	1432653
683	27.4	9.5	8.9	chr16	19341878	19342202	(70996143)	+	MLT1J	LTR/ERVL-MaLR	153	479	(33)	1433316
245	34.1	0.0	6.8	chr16	19389001	19389132	(70949213)	+	MIRb	SINE/MIR	24	146	(122)	1433455
2173	11.2	0.0	0.0	chr16	19467989	19468274	(70870071)	C	AluSx	SINE/Alu	(26)	286	1	1433633
2131	14.1	6.9	2.9	chr16	19468452	19468837	(70869508)	+	MLT1D	LTR/ERVL-MaLR	3	405	(100)	1433634
4136	14.2	6.5	3.3	chr16	22202059	22202074	(68136271)	C	L1MB7	LINE/L1	(24)	6160	6145	1439517
700	23.6	4.3	12.9	chr16	22623395	22623525	(67714820)	C	MIR	SINE/MIR	(0)	262	163	1440464
1906	16.3	1.3	1.0	chr16	27910732	27911038	(62427307)	+	AluJb	SINE/Alu	1	308	(4)	1452212
1324	28.4	5.0	4.5	chr16	27911221	27911256	(62427089)	+	L2a	LINE/L2	2911	2957	(469)	1452213
48	2.1	2.0	0.0	chr16	27911257	27911305	(62427040)	+	(CT)n	Simple_repeat	1	50	(0)	1452214
20	16.1	5.3	1.7	chr16	29805896	29805952	(60532393)	+	(CTCGCG)n	Simple_repeat	1	60	(0)	1456607
24	25.6	2.1	3.2	chr16	29806010	29806102	(60532243)	+	(CCCCTC)n	Simple_repeat	1	95	(0)	1456608
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
1522	19.6	5.7	0.0	chr16	30389817	30390120	(59948225)	C	AluJr	SINE/Alu	(0)	312	1	1457911
12	14.1	3.5	10.0	chr16	31117897	31117954	(59220391)	+	G-rich	Low_complexity	1	60	(0)	1459640
5857	12.0	2.6	4.9	chr16	31285972	31287630	(59050715)	C	L1PA16	LINE/L1	(128)	6038	4387	1460035
2378	17.9	2.5	2.3	chr16	31701035	31701520	(58636825)	C	MER57E3	LTR/ERV1	(0)	487	1	1460710
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
7549	4.2	6.0	0.2	chr16	46554268	46555216	(43783129)	+	LTR13	LTR/ERVK	1	1007	(0)	1465596
16	3.9	0.0	6.7	chr16	55056971	55057000	(35281345)	+	(CCG)n	Simple_repeat	1	30	(0)	1480665
1357	26.2	7.4	6.7	chr16	56574776	56575533	(33762812)	C	HAL1ME	LINE/L1	(639)	1826	1057	1483325
464	32.4	0.1	0.7	chr16	57766653	57766799	(32571546)	+	MIR	SINE/MIR	28	180	(50)	1485716
491	29.5	3.7	3.2	chr16	57767059	57767247	(32571098)	C	MIRb	SINE/MIR	(22)	246	57	1485717
12	18.8	2.6	2.6	chr16	58129651	58129688	(32208657)	+	(ACGTG)n	Simple_repeat	1	39	(0)	1486505
295	28.9	7.6	2.1	chr16	66275800	66275956	(24062389)	+	L1MB2	LINE/L1	1015	1152	(5516)	1499424
2744	23.4	5.7	1.5	chr16	66276056	66277053	(24061292)	+	L1MB2	LINE/L1	1142	2155	(4523)	1499424
13	15.2	0.0	3.2	chr16	66830711	66830741	(23507604)	+	(CCCGG)n	Simple_repeat	1	31	(0)	1500503
60	22.3	2.1	4.1	chr16	67029050	67029240	(23309105)	+	(GGC)n	Simple_repeat	1	195	(0)	1500922
13	21.6	4.7	4.5	chr16	67279303	67279366	(23058979)	+	G-rich	Low_complexity	1	67	(0)	1501369
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
1938	17.1	3.2	3.0	chr16	67481516	67482239	(22856106)	+	MER51C	LTR/ERV1	1	640	(0)	1501694
23	8.6	5.8	1.8	chr16	68510477	68510491	(21827854)	+	A-rich	Low_complexity	1	17	(0)	1503658
2390	8.8	0.6	1.9	chr16	68510492	68510808	(21827537)	+	AluSq2	SINE/Alu	1	313	(0)	1503659
2236	7.3	0.3	4.3	chr16	68977413	68977713	(21360632)	+	AluSc	SINE/Alu	2	290	(19)	1504793
2056	10.3	0.0	0.0	chr16	68977722	68977984	(21360361)	C	AluSx	SINE/Alu	(48)	264	2	1504794
4885	14.7	3.8	2.1	chr16	71912600	71913484	(18424861)	C	L1MB2	LINE/L1	(4)	6167	5268	1510631
1899	17.5	0.0	0.0	chr16	71913500	71913796	(18424549)	C	AluJb	SINE/Alu	(11)	301	5	1510632
16	0.0	0.0	4.2	chr16	73071405	73071428	(17266917)	+	(GAGG)n	Simple_repeat	1	24	(0)	1512355
25	20.3	0.0	0.0	chr16	73071457	73071509	(17266836)	+	(CTG)n	Simple_repeat	1	53	(0)	1512356
2916	14.8	6.3	0.0	chr16	74099381	74099885	(16238460)	+	LTR26C	LTR/ERV1	1	539	(0)	1514007
2582	14.4	6.7	1.8	chr16	74099886	74100312	(16238033)	+	L1MC2	LINE/L1	5882	6336	(8)	1514006
535	19.0	7.2	8.4	chr16	74279188	74279342	(16059003)	C	LTR48	LTR/ERV1	(1)	786	634	1514329
3380	15.6	7.3	6.4	chr16	74279350	74279604	(16058741)	C	LTR8A	LTR/ERV1	(3)	724	474	1514330
2341	10.3	0.3	1.3	chr16	74279605	74279916	(16058429)	C	AluSp	SINE/Alu	(4)	309	1	1514331
1706	18.9	3.9	0.0	chr16	74565057	74565353	(15772992)	+	AluSz	SINE/Alu	1	309	(3)	1514923
2205	15.4	1.5	5.3	chr16	74565382	74565793	(15772552)	+	MER57B2	LTR/ERV1	8	403	(0)	1514916
18	20.7	4.2	4.0	chr16	74606844	74606915	(15731430)	+	(TGCTGA)n	Simple_repeat	1	75	(0)	1515037
2555	5.6	0.0	1.0	chr16	75022282	75022611	(15315734)	+	AluY	SINE/Alu	1	311	(0)	1515953
728	17.3	9.6	2.6	chr16	75022612	75022765	(15315580)	C	MER3	DNA/hAT-Charlie	(43)	166	1	1515954
3819	24.6	9.5	2.4	chr16	77602123	77602711	(12735634)	+	L1MEf	LINE/L1	1823	2471	(4169)	1520122
3414	17.9	6.0	2.8	chr16	77602818	77603520	(12734825)	C	LTR8A	LTR/ERV1	(0)	727	1	1520126
2460	12.6	3.5	0.7	chr16	77690329	77690744	(12647601)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1520294
250	30.5	13.2	0.8	chr16	77690837	77690955	(12647390)	+	L3	LINE/CR1	3918	4053	(46)	1520295
241	32.1	0.0	4.7	chr16	81872566	81872650	(8465695)	+	MIRb	SINE/MIR	188	268	(0)	1528241
311	28.2	13.1	2.4	chr16	81872693	81872829	(8465516)	+	MIR3	SINE/MIR	2	153	(55)	1528242
217	26.8	10.1	0.0	chr16	85616834	85616904	(4721441)	C	L2a	LINE/L2	(10)	3365	3287	1535145
555	28.0	13.4	0.5	chr16	86325625	86325839	(4012506)	+	MLT1J	LTR/ERVL-MaLR	235	481	(31)	1536444
457	24.7	3.3	0.0	chr16	87109098	87109222	(3229123)	C	MIRb	SINE/MIR	(17)	251	112	1537814
3242	17.2	3.6	8.7	chr16	87109407	87110133	(3228212)	C	LTR8	LTR/ERV1	(0)	691	3	1537815
39	28.2	1.2	4.2	chr16	88534645	88534807	(1803538)	+	(CCGCCC)n	Simple_repeat	1	165	(0)	1540072
317	27.8	5.4	5.0	chr16	89465210	89465410	(872935)	+	HAL1ME	LINE/L1	1365	1566	(899)	1541301
25	23.9	1.7	0.0	chr16	89489211	89489268	(849077)	+	(AC)n	Simple_repeat	1	59	(0)	1541346
11	16.9	2.9	2.8	chr16	89489367	89489401	(848944)	+	(CCGCCA)n	Simple_repeat	1	36	(0)	1541347
13	23.5	1.8	5.4	chr16	89972927	89972981	(365364)	+	(CCT)n	Simple_repeat	1	56	(0)	1542179
302	23.0	18.0	0.0	chr16	90022365	90022464	(315881)	C	L2a	LINE/L2	(2)	3424	3303	1542246
2247	10.5	0.0	1.9	chr17	1187608	1187920	(82069521)	+	AluSx1	SINE/Alu	1	307	(5)	1546523
468	32.5	4.0	4.4	chr17	2202670	2202917	(81054524)	C	MIRb	SINE/MIR	(21)	247	1	1548646
14	12.8	2.6	5.1	chr17	4949608	4949645	(78307796)	+	G-rich	Low_complexity	1	39	(0)	1554114
14	12.3	2.6	5.0	chr17	6831596	6831634	(76425807)	+	(GGTGG)n	Simple_repeat	1	40	(0)	1557779
293	30.8	8.7	1.3	chr17	6831951	6832100	(76425341)	+	MIR3	SINE/MIR	20	175	(33)	1557780
236	26.9	5.0	2.9	chr17	6832124	6832261	(76425180)	C	HAL1ME	LINE/L1	(1587)	878	738	1557781
13	21.6	0.0	6.1	chr17	7446964	7447012	(75810429)	+	G-rich	Low_complexity	1	49	(0)	1558835
2570	4.8	0.3	1.0	chr17	7456040	7456353	(75801088)	C	AluSx	SINE/Alu	(0)	312	1	1558857
481	27.1	13.9	6.9	chr17	7537720	7538139	(75719302)	+	MLT1N2	LTR/ERVL-MaLR	102	555	(7)	1559024
3158	18.0	6.6	2.8	chr17	7538200	7538472	(75718969)	C	LTR8B	LTR/ERV1	(7)	813	520	1559025
2673	18.6	10.5	4.0	chr17	7538473	7539076	(75718365)	+	LTR1C1	LTR/ERV1	1	648	(0)	1559026
650	1.4	0.0	0.0	chr17	8220869	8220940	(75036501)	C	tRNA-Trp-TGG	tRNA	(3)	72	1	1560357
4355	13.6	9.3	2.1	chr17	9416667	9417278	(73840163)	+	LTR8B	LTR/ERV1	148	820	(0)	1562663
238	29.5	3.9	6.9	chr17	9417279	9417307	(73840134)	+	MER5B	DNA/hAT-Charlie	105	130	(48)	1562665
501	17.4	2.0	1.0	chr17	9417354	9417452	(73839989)	C	MER5B	DNA/hAT-Charlie	(6)	172	73	1562666
516	17.0	10.7	0.0	chr17	9417446	9417545	(73839896)	+	MER21C	LTR/ERVL	8	119	(819)	1562667
3011	16.1	10.9	10.7	chr17	11041337	11042059	(72215382)	+	LTR8A	LTR/ERV1	1	725	(2)	1565753
395	30.8	6.5	3.0	chr17	12680308	12680471	(70576970)	C	MIRb	SINE/MIR	(75)	193	24	1568480
9507	12.6	8.3	0.3	chr17	13138201	13139700	(70117741)	+	THE1C-int	LTR/ERVL-MaLR	1	1631	(0)	1569297
13	19.6	0.0	0.0	chr17	14301327	14301356	(68956085)	+	(GCC)n	Simple_repeat	1	30	(0)	1571199
3479	15.7	6.6	4.2	chr17	14525845	14526551	(68730890)	+	LTR8A	LTR/ERV1	3	727	(0)	1571599
5424	15.9	3.6	1.6	chr17	14526552	14526955	(68730486)	C	MER4B-int	LTR/ERV1	(3358)	3400	2988	1571598
21	31.9	1.5	0.0	chr17	17783970	17784035	(65473406)	+	(CT)n	Simple_repeat	1	67	(0)	1577348
210	32.3	0.0	2.9	chr17	17784059	17784160	(65473281)	C	UCON71_Crp	Unknown	(0)	277	179	1577349
2488	4.9	0.7	0.7	chr17	18087192	18087495	(65169946)	C	AluSp	SINE/Alu	(9)	304	1	1577926
1447	10.0	3.1	8.3	chr17	18087496	18087625	(65169816)	+	MER30	DNA/hAT-Charlie	104	228	(2)	1577924
224	13.2	0.5	4.7	chr17	18088113	18088165	(65169276)	+	MIR1_Amn	SINE/MIR	112	163	(105)	1577927
478	17.3	0.0	0.0	chr17	19992797	19992899	(63264542)	C	AluSx3	SINE/Alu	(0)	311	207	1581720
446	15.9	8.9	6.5	chr17	19992952	19993126	(63264315)	+	FRAM	SINE/Alu	6	296	(6)	1581721
1967	13.9	1.3	0.0	chr17	19993138	19993440	(63264001)	+	AluJo	SINE/Alu	6	312	(0)	1581722
14	4.9	0.0	0.0	chr17	21843039	21843059	(61414382)	+	(GCC)n	Simple_repeat	1	21	(0)	1584858
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
355	33.0	0.0	4.3	chr17	27339415	27339531	(55917910)	+	MIRb	SINE/MIR	123	234	(34)	1586560
268	33.1	3.9	10.3	chr17	27339608	27339802	(55917639)	+	MIR3	SINE/MIR	13	194	(14)	1586561
43	18.0	0.7	1.4	chr17	27339827	27339953	(55917488)	+	(AC)n	Simple_repeat	1	126	(0)	1586562
3209	15.2	13.8	2.9	chr17	27339954	27340455	(55916986)	C	LTR8A	LTR/ERV1	(0)	727	154	1586563
1013	15.8	4.1	0.0	chr17	28318592	28318755	(54938686)	C	AluJo	SINE/Alu	(140)	172	2	1588460
2194	8.8	1.3	0.3	chr17	30825490	30825785	(52431656)	+	AluSq	SINE/Alu	2	300	(13)	1593364
1268	16.9	13.0	2.2	chr17	30826000	30826266	(52431175)	+	AluJo	SINE/Alu	1	300	(12)	1593365
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
23	17.0	0.0	0.0	chr17	31710224	31710276	(51547165)	+	(AACAA)n	Simple_repeat	1	53	(0)	1595145
300	27.0	9.3	0.0	chr17	31710277	31710402	(51547039)	+	L1ME2	LINE/L1	1349	1487	(5616)	1595141
1284	7.0	0.0	0.0	chr17	31710429	31710586	(51546855)	+	AluYc	SINE/Alu	141	298	(1)	1595146
19	20.9	1.3	6.6	chr17	32341902	32341976	(50915465)	+	G-rich	Low_complexity	1	76	(0)	1596597
18	22.1	7.5	3.0	chr17	32341977	32341991	(50915450)	+	(GGCCG)n	Simple_repeat	5	101	(0)	1596598
4476	2.8	0.0	0.0	chr17	32821864	32822401	(50435040)	+	L1PA5	LINE/L1	5482	6019	(135)	1597471
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
4668	12.7	7.8	2.2	chr17	33436032	33436804	(49820637)	+	LTR8B	LTR/ERV1	1	820	(0)	1598663
2647	1.4	0.0	0.0	chr17	33436854	33437164	(49820277)	C	AluY	SINE/Alu	(0)	311	1	1598664
17	20.9	0.0	2.2	chr17	36545250	36545295	(46712146)	+	G-rich	Low_complexity	1	46	(0)	1604133
29	14.9	0.0	7.7	chr17	36545398	36545475	(46711966)	+	(GGCG)n	Simple_repeat	1	78	(0)	1604134
31	30.8	1.0	0.0	chr17	36545629	36545730	(46711711)	+	(GGC)n	Simple_repeat	1	103	(0)	1604135
28	0.0	0.0	0.0	chr17	38414512	38414538	(44842903)	+	(T)n	Simple_repeat	1	27	(0)	1607815
842	20.7	0.7	0.0	chr17	38414548	38414692	(44842749)	C	FRAM	SINE/Alu	(30)	146	1	1607816
12	23.3	4.4	0.0	chr17	39980700	39980744	(43276697)	+	(TCCTCCA)n	Simple_repeat	1	47	(0)	1611118
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
221	39.2	7.2	2.1	chr17	40827957	40828193	(42429248)	+	L2b	LINE/L2	2563	2812	(607)	1612718
342	26.0	1.5	0.0	chr17	40828333	40828419	(42429022)	+	MIR	SINE/MIR	66	153	(109)	1612719
535	22.9	7.8	0.0	chr17	40901311	40901428	(42356013)	+	MER45A	DNA/hAT-Tip100	51	178	(0)	1612831
423	30.2	4.8	1.6	chr17	41930142	41930323	(41327118)	C	MIRc	SINE/MIR	(58)	210	20	1614595
2354	5.5	2.0	0.7	chr17	42155250	42155542	(41101899)	C	AluSx	SINE/Alu	(15)	297	1	1615041
12	13.9	0.0	8.1	chr17	42609671	42609707	(40647734)	+	(GGCG)n	Simple_repeat	1	37	(0)	1615975
243	20.4	0.0	2.0	chr17	43766686	43766735	(39490706)	C	MIR3	SINE/MIR	(21)	187	139	1618562
2181	8.3	0.0	0.0	chr17	43937655	43937979	(39319462)	C	AluSx1	SINE/Alu	(0)	312	6	1618887
23	16.1	4.5	2.9	chr17	43938408	43938473	(39318968)	+	GA-rich	Low_complexity	1	69	(0)	1618888
22	21.2	0.0	0.0	chr17	44471864	44471907	(38785534)	+	A-rich	Low_complexity	1	44	(0)	1620002
330	28.3	10.3	4.0	chr17	45052314	45052486	(38204955)	C	MIRb	SINE/MIR	(21)	247	63	1621260
287	28.2	7.1	11.5	chr17	46922529	46922676	(36334765)	+	L2c	LINE/L2	3247	3387	(0)	1624999
12	17.0	2.9	2.8	chr17	46923240	46923274	(36334167)	+	(GCGAG)n	Simple_repeat	1	36	(0)	1625000
275	34.1	16.4	6.1	chr17	47831014	47831409	(35426032)	C	L2b	LINE/L2	(0)	3375	2931	1626803
14	24.6	3.3	3.2	chr17	48625916	48625976	(34631465)	+	(CGCCGG)n	Simple_repeat	1	63	(0)	1628156
17	4.3	0.0	0.0	chr17	50055727	50055750	(33201691)	+	(CAG)n	Simple_repeat	1	24	(0)	1631085
341	18.6	0.0	0.0	chr17	52387359	52387417	(30870024)	+	MSTB-int	LTR/ERVL-MaLR	363	421	(1230)	1635318
5087	18.7	2.4	2.0	chr17	52387429	52388385	(30869056)	+	MSTB-int	LTR/ERVL-MaLR	691	1651	(0)	1635318
731	28.7	10.6	3.3	chr17	55552014	55552493	(27704948)	C	L1MEd	LINE/L1	(1017)	5129	4611	1639853
1563	28.1	7.0	5.7	chr17	55552553	55553650	(27703791)	C	L1MEd	LINE/L1	(4862)	2241	1097	1639853
13	19.1	0.0	0.0	chr17	59106906	59106935	(24150506)	+	G-rich	Low_complexity	1	30	(0)	1646445
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
14	25.8	0.0	0.0	chr17	59220524	59220561	(24036880)	+	(GCC)n	Simple_repeat	1	38	(0)	1646719
886	27.9	22.2	0.7	chr17	59328577	59329021	(23928420)	C	L2a	LINE/L2	(294)	3132	2557	1647021
17	13.7	7.8	1.8	chr17	61411003	61411053	(21846388)	+	G-rich	Low_complexity	1	55	(0)	1651016
258	28.6	0.0	2.8	chr17	62995465	62995536	(20261905)	C	Tigger16a	DNA/TcMar-Tigger	(752)	205	136	1654087
15	16.7	2.4	2.3	chr17	63476529	63476570	(19780871)	+	(TCCCCCC)n	Simple_repeat	1	43	(0)	1654785
14	9.2	0.0	11.4	chr17	63622483	63622535	(19634906)	+	(GGCG)n	Simple_repeat	1	46	(0)	1655052
16	22.6	8.3	0.0	chr17	63622634	63622705	(19634736)	+	(CGCAGCC)n	Simple_repeat	1	78	(0)	1655053
13	23.7	0.0	4.2	chr17	63622772	63622819	(19634622)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1655054
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
27	11.5	5.2	1.6	chr17	64661886	64661943	(18595498)	+	(CGG)n	Simple_repeat	1	61	(0)	1657017
25	22.3	1.6	0.0	chr17	64662112	64662174	(18595267)	+	(GCC)n	Simple_repeat	1	64	(0)	1657018
30	7.0	2.9	7.0	chr17	64662354	64662422	(18595019)	+	G-rich	Low_complexity	1	71	(0)	1657019
2293	11.5	0.0	0.0	chr17	64684659	64684963	(18572478)	+	AluSc	SINE/Alu	1	305	(4)	1657082
16441	15.4	2.6	1.6	chr17	66094359	66095283	(17162158)	+	L1MA8	LINE/L1	6265	7209	(501)	1659683
30	6.1	0.0	0.0	chr17	66095284	66095318	(17162123)	+	(AC)n	Simple_repeat	1	35	(0)	1659688
5640	14.6	3.0	0.9	chr17	66095319	66095789	(17161652)	+	L1MA8	LINE/L1	7210	7687	(23)	1659683
655	24.4	6.3	12.4	chr17	66103236	66103553	(17153888)	+	L1MC4	LINE/L1	4216	4499	(1820)	1659696
7081	16.8	2.4	0.7	chr17	66103553	66104721	(17152720)	+	L1MA3	LINE/L1	6	1194	(6371)	1659702
2213	12.8	0.0	1.0	chr17	66256246	66256557	(17000884)	+	AluSx1	SINE/Alu	1	309	(3)	1659948
456	32.9	0.7	0.0	chr17	66256599	66256741	(17000700)	C	MIRb	SINE/MIR	(84)	184	41	1659949
631	20.2	1.6	22.1	chr17	66256750	66256886	(17000555)	+	MER5A	DNA/hAT-Charlie	4	133	(56)	1659950
306	30.8	15.9	1.6	chr17	68458177	68458364	(14799077)	C	MIRb	SINE/MIR	(22)	246	27	1664226
4361	14.5	4.3	0.4	chr17	68732251	68732949	(14524492)	+	LTR8A	LTR/ERV1	1	727	(0)	1664710
1288	25.7	3.8	4.7	chr17	68733099	68733547	(14523894)	+	MLT2C2	LTR/ERVL	20	464	(0)	1664711
18	4.7	0.0	0.0	chr17	70138541	70138562	(13118879)	+	(T)n	Simple_repeat	1	22	(0)	1666847
265	36.3	0.8	3.9	chr17	70336479	70336607	(12920834)	C	MIRb	SINE/MIR	(30)	238	114	1667146
275	11.5	0.0	1.9	chr17	70336994	70337046	(12920395)	C	L1MA9	LINE/L1	(23)	6289	6238	1667147
187	14.6	2.4	4.7	chr17	73970222	73970264	(9287177)	C	L2c	LINE/L2	(0)	3387	3346	1673258
2187	11.3	0.0	0.0	chr17	74290034	74290317	(8967124)	+	AluSx1	SINE/Alu	1	284	(28)	1673863
2488	9.0	0.0	0.0	chr17	74493754	74494065	(8763376)	+	AluSx1	SINE/Alu	1	312	(0)	1674262
26	25.1	1.4	0.0	chr17	75405587	75405657	(7851784)	+	(CCG)n	Simple_repeat	1	72	(0)	1676044
12	6.2	4.9	9.3	chr17	75878098	75878138	(7379303)	+	(AGGC)n	Simple_repeat	1	43	(0)	1676937
28	16.6	1.2	7.0	chr17	75878221	75878305	(7379136)	+	G-rich	Low_complexity	1	86	(0)	1676938
23	11.3	0.0	7.3	chr17	76265643	76265697	(6991744)	+	G-rich	Low_complexity	1	55	(0)	1677699
13	26.7	1.2	7.2	chr17	76265748	76265829	(6991612)	+	G-rich	Low_complexity	1	83	(0)	1677699
15	23.2	0.0	2.1	chr17	76265790	76265836	(6991605)	+	(GCCGAGG)n	Simple_repeat	1	47	(0)	1677700
21	6.3	0.0	2.9	chr17	76726788	76726822	(6530619)	+	(CCGCC)n	Simple_repeat	1	35	(0)	1678615
20	26.2	4.4	4.2	chr17	78352946	78352958	(4904483)	+	(GCGGCC)n	Simple_repeat	1	22	(96)	1681715
21	14.8	0.0	4.1	chr17	78352959	78353007	(4904434)	+	G-rich	Low_complexity	1	49	(0)	1681716
20	26.2	4.4	4.2	chr17	78353008	78353058	(4904383)	+	(GCGGCC)n	Simple_repeat	23	118	(0)	1681715
14	14.2	3.2	0.0	chr17	78353182	78353212	(4904229)	+	(CGCC)n	Simple_repeat	1	32	(0)	1681717
1500	16.4	6.9	1.8	chr17	78422502	78422775	(4834666)	C	AluJb	SINE/Alu	(15)	297	9	1681821
1614	20.5	4.1	0.0	chr17	78446944	78447226	(4810215)	C	AluJr	SINE/Alu	(17)	295	1	1681858
1434	23.8	5.0	12.8	chr17	78447227	78447354	(4810087)	C	L1MB5	LINE/L1	(440)	5734	5617	1681855
1736	17.1	1.0	3.3	chr17	80003769	80004073	(3253368)	+	AluJb	SINE/Alu	1	298	(14)	1684280
526	26.7	4.9	14.8	chr17	80004074	80004245	(3253196)	C	MER3	DNA/hAT-Charlie	(57)	152	1	1684279
16	14.9	0.0	0.0	chr17	80147172	80147202	(3110239)	+	(ACGT)n	Simple_repeat	1	31	(0)	1684529
1520	10.6	10.2	6.6	chr17	80147777	80148049	(3109392)	C	AluJb	SINE/Alu	(27)	285	2	1684530
320	29.2	0.9	0.0	chr17	82292819	82292924	(964517)	C	MLT1K	LTR/ERVL-MaLR	(336)	259	153	1687436
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
547	24.6	18.5	3.0	chr17	82843610	82843938	(413503)	C	L1ME2z	LINE/L1	(142)	6302	5917	1688324
13	12.9	9.1	2.1	chr17	83051163	83051206	(206235)	+	G-rich	Low_complexity	1	48	(0)	1688527
385	27.1	3.6	0.9	chr17	83109214	83109321	(148120)	C	MIR	SINE/MIR	(104)	158	48	1688573
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
1602	15.8	1.4	0.9	chr18	111676	112224	(80261061)	+	LSAU	Satellite	1	551	(128)	1689202
17	22.5	0.0	0.0	chr18	812316	812351	(79560934)	+	(C)n	Simple_repeat	1	36	(0)	1690509
26	17.4	7.0	4.9	chr18	3013285	3013398	(77359887)	+	(CGCCGCG)n	Simple_repeat	1	122	(0)	1693600
13	22.5	0.0	0.0	chr18	3013368	3013403	(77359882)	+	G-rich	Low_complexity	1	36	(0)	1693601
10404	13.1	3.7	0.7	chr18	5802625	5804206	(74569079)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1697718
1036	17.3	0.0	1.2	chr18	6536174	6536335	(73836950)	C	FRAM	SINE/Alu	(16)	160	1	1698688
251	31.9	0.0	7.8	chr18	6536376	6536477	(73836808)	C	MIR3	SINE/MIR	(67)	141	48	1698689
205	30.1	21.6	1.3	chr18	7924887	7925044	(72448241)	+	MIRc	SINE/MIR	2	200	(68)	1700759
1136	19.6	7.8	0.4	chr18	8933037	8933255	(71440030)	C	LTR8B	LTR/ERV1	(0)	820	583	1702113
2157	10.2	9.3	3.4	chr18	8933256	8933609	(71439676)	+	MER51B	LTR/ERV1	1	377	(0)	1702114
903	26.7	9.3	0.0	chr18	9742046	9742416	(70630869)	C	MER110A	LTR/ERV1	(0)	468	60	1703597
283	33.7	15.0	6.2	chr18	9919362	9920093	(70453192)	C	L2b	LINE/L2	(25)	3350	2489	1703869
4046	16.7	1.4	1.7	chr18	10419491	10420214	(69953071)	C	MER72	LTR/ERV1	(0)	722	1	1704530
293	35.5	7.9	3.6	chr18	10420220	10420509	(69952776)	C	L2b	LINE/L2	(44)	3343	3049	1704531
3395	16.0	13.0	5.4	chr18	10420510	10421262	(69952023)	C	LTR8B	LTR/ERV1	(2)	818	1	1704532
1941	25.7	4.8	2.0	chr18	12090010	12090664	(68282621)	C	L1P4	LINE/L1	(855)	5291	4618	1706907
2534	4.2	0.0	2.3	chr18	13836998	13837303	(66535982)	C	AluY	SINE/Alu	(12)	299	1	1709586
784	16.8	3.5	8.2	chr18	21968876	21969057	(58404228)	+	L1MB3	LINE/L1	5659	5831	(352)	1713642
883	14.5	0.0	1.5	chr18	21969068	21969198	(58404087)	C	FLAM_C	SINE/Alu	(14)	129	1	1713643
6690	12.9	6.2	5.6	chr18	22815807	22817076	(57556209)	C	MER52C	LTR/ERV1	(0)	1278	1	1715049
3359	14.9	3.6	0.5	chr18	23502524	23503082	(56870203)	+	MER34D	LTR/ERV1	3	579	(0)	1716342
14	25.4	1.9	1.9	chr18	23503490	23503542	(56869743)	+	(AGCCGC)n	Simple_repeat	1	54	(0)	1716343
296	27.4	14.2	1.3	chr18	24530813	24530971	(55842314)	+	OldhAT1	DNA/hAT-Ac	1225	1407	(1441)	1718120
14	5.0	0.0	0.0	chr18	24531112	24531132	(55842153)	+	(TTTC)n	Simple_repeat	1	21	(0)	1718121
2925	18.8	6.6	6.6	chr18	24964129	24964810	(55408475)	C	LTR8A	LTR/ERV1	(12)	715	34	1718748
368	28.1	10.4	0.8	chr18	26532862	26532983	(53840302)	+	L2b	LINE/L2	3241	3375	(0)	1721076
287	22.1	3.8	0.0	chr18	26532988	26533064	(53840221)	+	MIRc	SINE/MIR	45	124	(144)	1721077
354	21.0	11.0	4.8	chr18	29021090	29021234	(51352051)	+	Kanga1	DNA/TcMar-Tc2	1588	1742	(3)	1724496
456	23.9	16.2	2.2	chr18	29021238	29021417	(51351868)	+	MER63A	DNA/hAT-Blackjack	1	210	(0)	1724497
1856	15.2	8.5	0.3	chr18	29836832	29837154	(50536131)	+	THE1B	LTR/ERVL-MaLR	1	352	(12)	1725550
4623	16.4	13.3	0.9	chr18	29837169	29838067	(50535218)	+	THE1B-int	LTR/ERVL-MaLR	3	1030	(601)	1725550
14513	20.8	3.8	2.2	chr18	30752012	30758228	(49615057)	+	L1MA4	LINE/L1	358	7212	(510)	1726766
987	32.9	5.3	5.3	chr18	31512055	31512616	(48860669)	+	L2a	LINE/L2	2329	2890	(529)	1727769
268	30.3	17.8	1.8	chr18	31512678	31512899	(48860386)	+	L2a	LINE/L2	3063	3323	(64)	1727769
14	12.5	2.6	5.0	chr18	31677742	31677780	(48695505)	+	A-rich	Low_complexity	1	40	(0)	1728034
18	24.3	6.3	1.2	chr18	31685553	31685631	(48687654)	+	(CCG)n	Simple_repeat	1	84	(0)	1728041
4819	15.0	2.6	1.4	chr18	31777831	31778640	(48594645)	+	LTR8B	LTR/ERV1	1	820	(0)	1728188
849	17.4	0.0	8.3	chr18	31778790	31778958	(48594327)	+	MLT1E1A	LTR/ERVL-MaLR	526	680	(0)	1728189
13	20.1	5.0	0.0	chr18	31942839	31942878	(48430407)	+	(CCGGC)n	Simple_repeat	1	42	(0)	1728479
378	37.0	4.0	2.0	chr18	32877638	32877935	(47495350)	+	MamRTE1	LINE/RTE-BovB	1999	2302	(1510)	1730024
327	12.9	4.6	4.6	chr18	33421366	33421430	(46951855)	+	LTR40b	LTR/ERVL	398	462	(0)	1730699
270	16.3	0.0	3.9	chr18	33421431	33421474	(46951811)	+	MER63D	DNA/hAT-Blackjack	38	79	(982)	1730700
599	23.6	0.0	2.4	chr18	33421481	33421606	(46951679)	+	MER63B	DNA/hAT-Blackjack	312	434	(2)	1730701
17	22.0	2.0	2.0	chr18	33440758	33440807	(46932478)	+	(GCG)n	Simple_repeat	1	51	(0)	1730735
1134	19.6	1.4	0.4	chr18	33567689	33567964	(46805321)	+	L1ME1	LINE/L1	1290	1568	(4832)	1730892
1969	28.1	1.2	3.7	chr18	33568005	33568768	(46804517)	+	L1ME1	LINE/L1	4786	5530	(789)	1730892
7429	13.3	9.7	1.0	chr18	33863434	33864707	(46508578)	C	THE1D-int	LTR/ERVL-MaLR	(181)	1399	3	1731219
25	8.6	0.0	2.6	chr18	34493213	34493251	(45880034)	+	(TG)n	Simple_repeat	1	39	(0)	1732026
13	15.8	2.7	2.6	chr18	34493261	34493297	(45879988)	+	GA-rich	Low_complexity	1	38	(0)	1732027
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
13	8.6	0.0	6.9	chr18	35972700	35972728	(44400557)	+	(GCG)n	Simple_repeat	1	29	(0)	1734074
1892	10.3	8.0	2.2	chr18	36067891	36068207	(44305078)	+	L1MA2	LINE/L1	5968	6304	(0)	1734239
316	23.5	8.6	8.1	chr18	37778928	37779084	(42594201)	C	MIRc	SINE/MIR	(45)	163	9	1736519
553	29.6	4.7	2.7	chr18	42641567	42641806	(37731479)	+	MIRb	SINE/MIR	3	262	(6)	1743104
1346	21.1	15.3	10.8	chr18	50299200	50299273	(30074012)	C	LTR8	LTR/ERV1	(0)	727	653	1754922
1923	13.8	1.6	0.0	chr18	50299274	50299570	(30073715)	+	AluJb	SINE/Alu	11	312	(0)	1754923
2269	19.4	7.0	4.2	chr18	52870432	52870976	(27502309)	+	LTR8A	LTR/ERV1	167	727	(0)	1759051
1823	19.2	1.2	6.2	chr18	52870977	52871462	(27501823)	C	LTR49-int	LTR/ERV1	(7376)	831	365	1759053
2371	23.3	3.6	8.5	chr18	60637669	60638396	(19734889)	C	LTR8	LTR/ERV1	(0)	691	1	1770789
3940	14.2	6.9	1.2	chr18	61661814	61662498	(18710787)	+	LTR8A	LTR/ERV1	1	727	(0)	1772280
602	19.8	0.1	1.7	chr18	61662502	61662625	(18710660)	+	MLT1C	LTR/ERVL-MaLR	279	408	(0)	1772278
12	19.9	0.0	0.0	chr18	61894185	61894213	(18479072)	+	(GGC)n	Simple_repeat	1	29	(0)	1772611
16	5.3	0.0	0.0	chr18	62425526	62425545	(17947740)	+	(T)n	Simple_repeat	1	20	(0)	1773435
13	24.3	0.0	8.1	chr18	62715590	62715651	(17657634)	+	(CCG)n	Simple_repeat	1	62	(0)	1773932
51	28.8	3.0	3.0	chr18	62715748	62715977	(17657308)	+	(CGG)n	Simple_repeat	1	237	(0)	1773933
1372	33.3	9.2	3.8	chr18	70635442	70636497	(9736788)	+	L4_A_Mam	LINE/RTE-X	3345	4472	(518)	1784896
20	26.5	1.4	1.4	chr18	76496122	76496190	(3877095)	+	G-rich	Low_complexity	1	70	(0)	1792187
14	17.6	0.0	4.8	chr18	76496561	76496602	(3876683)	+	G-rich	Low_complexity	1	42	(0)	1792188
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
13	8.8	0.0	3.9	chr19	572575	572600	(58045016)	+	(GCG)n	Simple_repeat	1	26	(0)	1797176
706	21.6	4.7	2.4	chr19	903600	903766	(57713850)	+	AluJb	SINE/Alu	120	290	(22)	1797848
2455	6.9	0.0	0.3	chr19	903769	904071	(57713545)	+	AluY	SINE/Alu	1	302	(9)	1797849
217	14.6	0.0	2.5	chr19	1862606	1862652	(56754964)	C	MIR3	SINE/MIR	(59)	149	104	1799635
1847	14.5	0.7	0.0	chr19	2069521	2069789	(56547827)	+	AluSq2	SINE/Alu	36	306	(7)	1800079
12	16.0	0.0	3.3	chr19	2096922	2096951	(56520665)	+	(GGCCG)n	Simple_repeat	1	30	(0)	1800145
2555	4.4	0.0	0.0	chr19	3913955	3914250	(54703366)	+	AluY	SINE/Alu	1	296	(15)	1804326
1974	15.7	2.8	3.4	chr19	3914251	3914524	(54703092)	C	THE1B	LTR/ERVL-MaLR	(67)	297	20	1804325
267	17.4	0.0	0.0	chr19	3914525	3914560	(54703056)	+	Alu	SINE/Alu	1	36	(97)	1804327
11	21.0	2.5	2.4	chr19	5687402	5687441	(52930175)	+	G-rich	Low_complexity	1	41	(0)	1808589
7881	19.1	5.7	12.2	chr19	6285805	6287690	(52329926)	+	MER52A	LTR/ERV1	1	1755	(0)	1809816
2218	6.3	4.6	0.0	chr19	6863212	6863482	(51754134)	C	AluSq2	SINE/Alu	(29)	284	1	1811398
16	26.7	2.8	6.4	chr19	7920491	7920596	(50697020)	+	(AGCCGG)n	Simple_repeat	1	109	(0)	1813980
488	28.8	5.8	1.8	chr19	8721949	8722114	(49895502)	+	MIRb	SINE/MIR	2	174	(94)	1816004
3249	15.0	6.4	2.8	chr19	9323409	9324010	(49293606)	+	MER51A	LTR/ERV1	1	625	(9)	1817237
17	12.7	0.0	5.3	chr19	9914851	9914888	(48702728)	+	(CCG)n	Simple_repeat	1	38	(0)	1818429
263	22.6	9.3	3.0	chr19	9914968	9915135	(48702481)	+	MIR1_Amn	SINE/MIR	14	196	(34)	1818430
1260	16.0	0.0	2.5	chr19	10286380	10286579	(48331037)	C	AluJr	SINE/Alu	(31)	281	87	1819377
202	32.2	20.1	2.9	chr19	10916772	10916976	(47700640)	+	MIR	SINE/MIR	14	262	(0)	1820994
425	21.6	2.1	5.2	chr19	10916981	10917077	(47700539)	+	FLAM_A	SINE/Alu	42	135	(7)	1820995
1616	12.8	4.2	0.8	chr19	10941763	10942013	(47675603)	C	AluSx3	SINE/Alu	(10)	301	42	1821057
357	21.4	1.2	0.0	chr19	10942051	10942134	(47675482)	C	L1MC	LINE/L1	(522)	5811	5727	1821058
822	6.0	0.0	0.0	chr19	10942378	10942477	(47675139)	+	AluSx	SINE/Alu	1	100	(212)	1821059
1176	5.0	0.0	0.7	chr19	10942478	10942616	(47675000)	C	AluYk11	SINE/Alu	(173)	138	1	1821060
9581	10.7	3.7	5.1	chr19	11606364	11607128	(47010488)	C	THE1C-int	LTR/ERVL-MaLR	(327)	1253	497	1822780
15	4.7	0.0	0.0	chr19	12295241	12295262	(46322354)	+	(GGGT)n	Simple_repeat	1	22	(0)	1824168
949	25.0	4.6	4.3	chr19	12295333	12295587	(46322029)	C	LTR8A	LTR/ERV1	(0)	727	472	1824169
767	14.1	0.7	6.3	chr19	12295588	12295709	(46321907)	+	FLAM_C	SINE/Alu	1	120	(23)	1824170
1027	23.6	10.1	2.8	chr19	12364759	12365233	(46252383)	+	LTR26E	LTR/ERV1	24	622	(0)	1824315
12	11.2	3.2	3.1	chr19	15418441	15418471	(43199145)	+	G-rich	Low_complexity	1	32	(0)	1831769
480	25.0	4.0	6.2	chr19	15538496	15538674	(43078942)	C	L2a	LINE/L2	(0)	3426	3252	1832046
573	25.5	5.0	2.0	chr19	15538765	15538960	(43078656)	C	L2a	LINE/L2	(0)	3426	3225	1832047
4008	16.8	0.7	3.9	chr19	15971068	15971848	(42645768)	+	L1MC1	LINE/L1	5169	5941	(392)	1832868
13	23.7	1.6	6.3	chr19	16324576	16324637	(42292979)	+	G-rich	Low_complexity	1	63	(0)	1833721
12	20.8	0.0	2.9	chr19	16324656	16324690	(42292926)	+	(GCC)n	Simple_repeat	1	35	(0)	1833722
2183	13.1	0.3	0.0	chr19	16685105	16685401	(41932215)	+	AluSx1	SINE/Alu	1	298	(14)	1834453
2588	17.9	3.7	6.6	chr19	16685402	16685817	(41931799)	C	MER77	LTR/ERVL	(132)	472	53	1834451
394	27.0	5.3	0.0	chr19	18701268	18701407	(39916209)	+	MIR	SINE/MIR	99	243	(19)	1839406
2179	7.9	7.1	0.7	chr19	19613184	19613473	(39004143)	+	AluSx1	SINE/Alu	1	310	(2)	1841298
1244	15.4	0.0	0.9	chr19	21328634	21328856	(37288760)	+	MER57E3	LTR/ERV1	267	487	(0)	1843854
2775	17.2	1.0	1.2	chr19	32573284	32573766	(26043850)	+	MER66B	LTR/ERV1	1	482	(4)	1855070
2231	7.8	0.3	0.3	chr19	32651377	32651669	(25965947)	C	AluY	SINE/Alu	(18)	293	1	1855225
245	33.8	0.0	0.0	chr19	32651791	32651861	(25965755)	+	L2b	LINE/L2	3301	3371	(4)	1855226
13	14.1	3.0	2.9	chr19	32692046	32692078	(25925538)	+	(CCG)n	Simple_repeat	1	34	(0)	1855320
2870	18.6	9.0	4.4	chr19	33568542	33569199	(25048417)	+	LTR8	LTR/ERV1	1	691	(0)	1856959
424	29.6	8.2	9.1	chr19	33569200	33569385	(25048231)	+	HAL1	LINE/L1	62	248	(2259)	1856958
2197	22.7	7.1	6.8	chr19	33593953	33594641	(25022975)	+	LTR8	LTR/ERV1	1	691	(0)	1857010
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
4213	15.4	8.2	0.5	chr19	34075700	34076456	(24541160)	+	LTR8B	LTR/ERV1	1	820	(0)	1857838
3393	14.7	4.9	0.9	chr19	34076457	34076839	(24540777)	+	MER6A	DNA/TcMar-Tigger	223	603	(2)	1857837
28	0.0	0.0	0.0	chr19	34237260	34237286	(24380330)	+	(AAAT)n	Simple_repeat	1	27	(0)	1858212
339	35.6	6.5	7.3	chr19	34237393	34237886	(24379730)	+	L2	LINE/L2	1090	1579	(1840)	1858213
15	19.7	0.0	0.0	chr19	34926695	34926723	(23690893)	+	(T)n	Simple_repeat	1	29	(0)	1859341
12	14.6	0.0	5.9	chr19	35545823	35545856	(23071760)	+	G-rich	Low_complexity	1	34	(0)	1860636
14	24.5	0.0	2.2	chr19	36115480	36115524	(22502092)	+	(GCGGCG)n	Simple_repeat	1	45	(0)	1861899
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
19	21.8	5.0	1.6	chr19	36604933	36604992	(22012624)	+	(CA)n	Simple_repeat	1	63	(0)	1862875
13	14.0	0.0	5.7	chr19	36605285	36605319	(22012297)	+	(GCGCAG)n	Simple_repeat	1	35	(0)	1862876
2453	6.8	0.0	0.0	chr19	36797031	36797325	(21820291)	C	AluY	SINE/Alu	(16)	295	1	1863279
1324	24.5	7.3	14.7	chr19	37780836	37781154	(20836462)	C	L1MA7	LINE/L1	(494)	5811	5546	1865094
1694	12.5	0.3	13.3	chr19	38402454	38402798	(20214818)	+	AluJb	SINE/Alu	1	300	(12)	1866577
12	4.1	3.5	6.7	chr19	38402967	38402995	(20214621)	+	(GGGGC)n	Simple_repeat	1	30	(0)	1866578
12	17.5	3.1	0.0	chr19	39885953	39885984	(18731632)	+	(CTCTCC)n	Simple_repeat	1	33	(0)	1869830
279	20.7	9.9	2.4	chr19	40054686	40054769	(18562847)	C	MIR	SINE/MIR	(10)	252	162	1870171
2170	10.2	1.6	1.3	chr19	40770520	40770823	(17846793)	+	AluSz	SINE/Alu	1	305	(7)	1871919
4398	13.5	2.8	3.6	chr19	40770942	40771710	(17845906)	C	LTR12D	LTR/ERV1	(123)	1131	370	1871920
2100	12.1	1.4	0.0	chr19	41455105	41455385	(17162231)	C	AluSx	SINE/Alu	(27)	285	1	1873479
2159	13.9	1.7	7.7	chr19	41455386	41455558	(17162058)	C	LTR49-int	LTR/ERV1	(851)	5480	5306	1873478
2545	18.8	2.6	1.3	chr19	41455559	41456224	(17161392)	C	LTR8B	LTR/ERV1	(0)	820	1	1873480
229	33.7	5.2	1.2	chr19	41801209	41801373	(16816243)	C	LTR101_Mam	LTR/ERVL	(10)	819	648	1873939
2520	15.6	5.1	1.8	chr19	41801438	41802128	(16815488)	C	LTR8B	LTR/ERV1	(0)	820	1	1873940
17	9.4	5.9	5.6	chr19	42076164	42076214	(16541402)	+	(GCGAGA)n	Simple_repeat	1	54	(0)	1874520
12	13.9	6.2	0.0	chr19	42176848	42176879	(16440737)	+	(CGCC)n	Simple_repeat	1	34	(0)	1874737
30	22.1	0.0	3.6	chr19	42177009	42177092	(16440524)	+	(GCGG)n	Simple_repeat	1	84	(0)	1874738
17	6.5	2.8	5.4	chr19	42177108	42177143	(16440473)	+	(GCCC)n	Simple_repeat	1	37	(0)	1874739
28	3.3	0.0	0.0	chr19	42177252	42177282	(16440334)	+	(CCCGCT)n	Simple_repeat	1	31	(0)	1874740
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
478	32.4	10.7	9.1	chr19	42474684	42475093	(16142523)	C	L2c	LINE/L2	(150)	3237	2827	1875360
3068	13.0	12.2	10.0	chr19	42475094	42475297	(16142319)	C	LTR8A	LTR/ERV1	(0)	727	582	1875362
1311	3.9	0.0	0.0	chr19	42475298	42475453	(16142163)	C	L1PA4	LINE/L1	(3)	6152	5997	1875363
18	18.2	1.1	11.6	chr19	46697354	46697447	(11920169)	+	(CCCAC)n	Simple_repeat	1	95	(0)	1884332
2176	12.2	0.3	0.3	chr19	48774302	48774604	(9843012)	C	AluSz	SINE/Alu	(9)	303	1	1889569
710	23.7	4.0	21.5	chr19	48774605	48774883	(9842733)	C	L1MC4	LINE/L1	(1104)	6938	6700	1889561
51	0.0	0.0	0.0	chr19	48774884	48774927	(9842689)	+	(AC)n	Simple_repeat	1	44	(0)	1889570
710	23.7	4.0	21.5	chr19	48774928	48774942	(9842674)	C	L1MC4	LINE/L1	(1343)	6699	6687	1889561
288	26.2	5.0	0.2	chr19	49766133	49766271	(8851345)	+	MIRc	SINE/MIR	60	199	(31)	1891890
254	24.7	8.2	7.3	chr19	50026980	50027075	(8590541)	C	MIRb	SINE/MIR	(11)	257	161	1892450
542	28.6	10.2	3.1	chr19	50027083	50027338	(8590278)	C	MER46C	DNA/TcMar-Tigger	(25)	313	38	1892451
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
255	26.8	19.8	0.0	chr19	50147795	50147891	(8469725)	+	MIRb	SINE/MIR	33	153	(115)	1892776
198	31.5	8.9	7.1	chr19	50369139	50369237	(8248379)	C	MIRb	SINE/MIR	(58)	210	110	1893356
445	26.5	1.0	0.0	chr19	50369338	50369435	(8248181)	C	MLT1J2	LTR/ERVL-MaLR	(303)	145	47	1893357
590	9.1	3.3	2.2	chr19	50369559	50369676	(8247940)	C	AluSx	SINE/Alu	(0)	312	192	1893358
2095	15.1	0.0	1.6	chr19	50793228	50793539	(7824077)	+	AluSx	SINE/Alu	1	307	(5)	1894367
1492	27.4	5.9	0.6	chr19	50814666	50815150	(7802466)	C	LTR33A	LTR/ERVL	(6)	514	3	1894395
1535	7.5	0.0	0.0	chr19	52268869	52269056	(6348560)	C	AluSp	SINE/Alu	(125)	188	1	1897143
16	10.7	2.1	8.2	chr19	52269298	52269345	(6348271)	+	(ATTTTA)n	Simple_repeat	1	49	(0)	1897144
14	18.2	0.0	4.9	chr19	52269521	52269561	(6348055)	+	(GGCCC)n	Simple_repeat	1	41	(0)	1897145
196	29.7	1.5	1.5	chr19	55280120	55280184	(3337432)	C	OldhAT1	DNA/hAT-Ac	(750)	2098	2034	1903374
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
16	20.7	3.9	1.9	chr19	56404356	56404407	(2213209)	+	(CGGCCC)n	Simple_repeat	1	54	(0)	1905746
3469	18.2	7.0	1.3	chr19	56874103	56874787	(1742829)	+	LTR8A	LTR/ERV1	1	727	(0)	1906636
390	28.4	15.8	5.2	chr19	56874788	56875130	(1742486)	+	MLT2F	LTR/ERVL	269	653	(10)	1906635
1809	11.1	2.7	2.7	chr2	3574677	3574974	(238618555)	C	AluJb	SINE/Alu	(14)	298	1	1914685
32544	20.9	1.9	1.6	chr2	6838364	6846789	(235346740)	C	HUERS-P3-int	LTR/ERV1	(224)	8695	262	1919104
365	20.9	1.3	2.4	chr2	9737114	9737196	(232456333)	+	MLT1B	LTR/ERVL-MaLR	293	390	(0)	1923557
901	13.7	0.0	0.0	chr2	10121650	10121788	(232071741)	C	FLAM_C	SINE/Alu	(4)	139	1	1924225
187	34.7	0.0	2.7	chr2	15730455	15730528	(226463001)	+	L3	LINE/CR1	4026	4097	(2)	1933205
606	32.3	9.2	0.4	chr2	17309476	17309702	(224883827)	+	MIRb	SINE/MIR	5	253	(15)	1935816
15	9.1	4.2	0.0	chr2	20923741	20923764	(221269765)	+	(AG)n	Simple_repeat	1	25	(0)	1941076
1205	16.2	0.0	0.0	chr2	24386926	24387110	(217806419)	C	AluSx	SINE/Alu	(12)	300	116	1946013
3247	13.4	4.3	3.7	chr2	24387112	24387142	(217806387)	C	L1MB3	LINE/L1	(76)	6107	6081	1946014
3506	14.8	5.4	7.4	chr2	24387143	24387504	(217806025)	C	LTR8A	LTR/ERV1	(0)	727	386	1946015
191	27.6	8.4	4.4	chr2	24490668	24490826	(217702703)	C	MIR3	SINE/MIR	(42)	166	1	1946256
19	22.1	0.0	0.0	chr2	24490925	24490971	(217702558)	+	G-rich	Low_complexity	1	47	(0)	1946257
38	21.6	4.0	6.1	chr2	24491129	24491302	(217702227)	+	(GCGGCG)n	Simple_repeat	1	181	(0)	1946258
14	31.3	0.0	0.0	chr2	25982424	25982474	(216211055)	+	(GCC)n	Simple_repeat	1	51	(0)	1949040
19	19.9	3.0	5.1	chr2	25982575	25982647	(216210882)	+	G-rich	Low_complexity	1	71	(0)	1949041
30	17.0	0.0	0.0	chr2	26245248	26245300	(215948229)	+	(GT)n	Simple_repeat	1	53	(0)	1949599
304	26.1	10.0	10.3	chr2	26245548	26245700	(215947829)	C	MIR3	SINE/MIR	(44)	164	14	1949600
16	17.3	2.6	0.0	chr2	28567187	28567225	(213626304)	+	A-rich	Low_complexity	1	40	(0)	1953788
2393	6.8	0.0	0.7	chr2	28567461	28567752	(213625777)	C	AluSc5	SINE/Alu	(0)	309	20	1953789
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
295	37.4	9.3	3.4	chr2	33605026	33605288	(208588241)	+	L2c	LINE/L2	2930	3209	(178)	1962252
719	26.5	4.5	0.4	chr2	33605377	33605630	(208587899)	C	LTR8B	LTR/ERV1	(9)	811	547	1962253
2351	9.6	0.3	0.0	chr2	36624967	36625258	(205568271)	C	AluSx4	SINE/Alu	(16)	294	2	1966271
3791	12.7	9.2	14.6	chr2	36625310	36626179	(205567350)	C	LTR8B	LTR/ERV1	(2)	818	1	1966272
2648	14.1	7.7	0.0	chr2	36636497	36636951	(205556578)	C	LTR8B	LTR/ERV1	(0)	820	328	1966282
1797	20.5	6.1	0.8	chr2	42972683	42973071	(199220458)	C	MLT1F	LTR/ERVL-MaLR	(8)	540	130	1976646
510	29.7	13.3	1.7	chr2	44615936	44616281	(197577248)	+	L2	LINE/L2	2448	2839	(580)	1979498
1990	14.3	0.0	0.0	chr2	44911548	44911841	(197281688)	+	AluSx	SINE/Alu	1	294	(18)	1979945
969	21.9	11.3	5.3	chr2	44911842	44912205	(197281324)	+	L1MEd	LINE/L1	1384	1640	(5463)	1979938
19	24.9	1.4	2.8	chr2	46699184	46699253	(195494276)	+	G-rich	Low_complexity	1	71	(0)	1982668
12	21.8	7.5	2.8	chr2	47521110	47521176	(194672353)	+	(GGCGTC)n	Simple_repeat	1	72	(0)	1984253
5731	10.6	2.2	0.4	chr2	48627716	48628876	(193564653)	C	L1PA16	LINE/L1	(0)	6869	5695	1986323
23	26.6	1.2	2.4	chr2	54456068	54456153	(187737376)	+	G-rich	Low_complexity	1	85	(0)	1994401
259	11.6	0.0	0.0	chr2	55511892	55511934	(186681595)	+	L1MC5a	LINE/L1	2731	2773	(4)	1996045
4046	15.2	10.1	0.7	chr2	57550816	57551557	(184641972)	+	LTR8B	LTR/ERV1	1	820	(0)	1998723
2596	12.1	0.8	0.3	chr2	57551580	57551952	(184641577)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1998724
538	24.7	1.8	4.0	chr2	59685411	59685583	(182507946)	+	L2	LINE/L2	2655	2823	(596)	2001425
16	0.0	0.0	0.0	chr2	60530333	60530350	(181663179)	+	(A)n	Simple_repeat	1	18	(0)	2002560
19	8.2	0.0	0.0	chr2	60530599	60530624	(181662905)	+	(T)n	Simple_repeat	1	26	(0)	2002561
18	18.7	0.0	0.0	chr2	60530676	60530707	(181662822)	+	A-rich	Low_complexity	1	32	(0)	2002562
12	26.8	0.0	8.9	chr2	61065894	61065972	(181127557)	+	G-rich	Low_complexity	1	79	(0)	2003591
3079	19.9	9.2	4.1	chr2	62284550	62284976	(179908553)	+	L1ME2	LINE/L1	5373	5792	(372)	2006185
4582	14.4	4.0	5.4	chr2	62284977	62285469	(179908060)	C	LTR8B	LTR/ERV1	(0)	820	328	2006187
4597	14.2	9.3	0.0	chr2	62291205	62291946	(179901583)	+	LTR8B	LTR/ERV1	1	818	(2)	2006205
3503	18.3	10.3	4.5	chr2	62291947	62292184	(179901345)	+	MER21B	LTR/ERVL	605	861	(7)	2006203
443	34.2	15.4	2.6	chr2	63852575	63853219	(178340310)	C	L2b	LINE/L2	(583)	2836	2095	2008445
432	18.5	4.0	4.8	chr2	65358661	65358783	(176834746)	C	Tigger16a	DNA/TcMar-Tigger	(17)	940	787	2011109
585	24.3	2.2	1.3	chr2	65512198	65512373	(176681156)	C	L1MD3	LINE/L1	(3299)	3020	2833	2011400
1029	22.6	0.9	3.0	chr2	65512374	65512610	(176680919)	C	L1MD3	LINE/L1	(6158)	242	11	2011400
427	21.4	10.8	0.4	chr2	66042009	66042130	(176151399)	+	L2a	LINE/L2	3245	3426	(0)	2012263
271	29.2	0.0	0.0	chr2	66042293	66042357	(176151172)	+	MER102b	DNA/hAT-Charlie	11	75	(266)	2012264
279	27.3	7.4	0.0	chr2	66042400	66042487	(176151042)	+	MER102c	DNA/hAT-Charlie	227	321	(10)	2012265
410	30.9	4.2	4.5	chr2	66776097	66776318	(175417211)	+	MIRc	SINE/MIR	29	248	(20)	2013173
4599	19.5	5.3	3.5	chr2	67646290	67647346	(174546183)	C	LTR27E	LTR/ERV1	(0)	1077	1	2014367
3933	13.8	2.5	7.0	chr2	69764677	69765439	(172428090)	C	L1MB3	LINE/L1	(7)	6176	5449	2017717
579	23.0	2.2	6.5	chr2	69789129	69789314	(172404215)	C	MIRc	SINE/MIR	(35)	233	56	2017766
5256	11.7	1.4	1.0	chr2	69789458	69790233	(172403296)	C	LTR19C	LTR/ERV1	(0)	779	1	2017767
1979	13.4	0.3	3.5	chr2	70919561	70919874	(171273655)	+	AluJb	SINE/Alu	3	306	(6)	2019821
398	25.4	2.7	15.3	chr2	70919875	70919937	(171273592)	+	MIR	SINE/MIR	197	257	(5)	2019819
799	29.4	4.9	0.6	chr2	70919979	70920307	(171273222)	+	Charlie20a	DNA/hAT-Charlie	299	642	(165)	2019822
677	33.9	5.7	5.4	chr2	73068622	73069516	(169124013)	C	L2b	LINE/L2	(0)	3375	2470	2023051
3523	19.9	7.9	7.1	chr2	73401576	73402012	(168791517)	C	L1MA9	LINE/L1	(38)	6772	6271	2023675
41	8.7	1.6	0.0	chr2	73402013	73402073	(168791456)	+	(GT)n	Simple_repeat	1	62	(0)	2023676
3523	19.9	7.9	7.1	chr2	73402074	73402270	(168791259)	C	L1MA9	LINE/L1	(540)	6270	6113	2023675
2021	13.8	4.6	0.0	chr2	73402271	73402559	(168790970)	C	AluSz6	SINE/Alu	(9)	303	1	2023677
1910	14.7	0.6	4.1	chr2	74018964	74019283	(168174246)	+	AluJr	SINE/Alu	1	309	(3)	2024640
446	29.1	9.6	6.5	chr2	74019284	74019436	(168174093)	C	L1ME4b	LINE/L1	(1674)	4472	4315	2024632
218	35.1	3.6	4.3	chr2	74019480	74019619	(168173910)	+	L2b	LINE/L2	3246	3384	(3)	2024641
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
19	20.4	0.0	3.7	chr2	95345722	95345775	(146847754)	+	G-rich	Low_complexity	1	54	(0)	2050548
4816	18.2	6.2	3.7	chr2	98447549	98447789	(143745740)	C	L1MC4	LINE/L1	(4)	8038	7788	2055026
2365	6.4	0.0	0.0	chr2	98447790	98448069	(143745460)	+	AluY	SINE/Alu	25	304	(7)	2055027
232	33.3	0.0	2.9	chr2	98608073	98608174	(143585355)	C	MIRb	SINE/MIR	(77)	191	93	2055212
584	19.5	4.8	6.3	chr2	100871089	100871214	(141322315)	+	MER58A	DNA/hAT-Charlie	1	124	(100)	2058648
230	22.3	6.0	6.0	chr2	101252168	101252267	(140941262)	+	L1ME3	LINE/L1	5863	5962	(200)	2059266
824	15.2	8.6	0.0	chr2	101252312	101252449	(140941080)	C	AluJr	SINE/Alu	(25)	287	137	2059270
18	18.6	0.0	5.6	chr2	101252681	101252734	(140940795)	+	(CGCCC)n	Simple_repeat	1	54	(0)	2059271
522	15.3	0.0	0.0	chr2	101333806	101333890	(140859639)	+	L1MB5	LINE/L1	6078	6162	(12)	2059412
16	19.2	2.4	9.2	chr2	101387413	101387420	(140806109)	+	(GCCGGCC)n	Simple_repeat	1	28	(59)	2059502
15	25.6	3.1	3.0	chr2	101387421	101387484	(140806045)	+	(CCGG)n	Simple_repeat	1	66	(0)	2059503
16	19.2	2.4	9.2	chr2	101387485	101387497	(140806032)	+	(GCCGGCC)n	Simple_repeat	29	87	(0)	2059502
19779	9.4	1.2	0.5	chr2	101935382	101940619	(140252910)	+	L1P3	LINE/L1	1	5280	(1181)	2060371
1394	25.9	2.9	7.1	chr2	105727305	105727789	(136465740)	+	MLT1F2	LTR/ERVL-MaLR	117	569	(0)	2065401
1320	22.7	10.9	9.4	chr2	106143499	106144029	(136049500)	C	MLT1E2	LTR/ERVL-MaLR	(5)	622	83	2065943
250	29.1	6.2	10.1	chr2	106497967	106498135	(135695394)	C	L4_C_Mam	LINE/RTE-X	(273)	4865	4701	2066560
8750	20.1	2.7	0.3	chr2	106601299	106602903	(135590626)	C	MSTB-int	LTR/ERVL-MaLR	(6)	1645	1	2066753
2283	16.7	5.4	0.7	chr2	106602905	106603309	(135590220)	C	MSTB	LTR/ERVL-MaLR	(1)	425	1	2066753
2166	11.2	0.0	4.2	chr2	107909022	107909167	(134284362)	+	AluSc	SINE/Alu	1	144	(165)	2068563
3934	11.4	1.3	4.9	chr2	107909168	107909796	(134283733)	C	LTR14B	LTR/ERVK	(0)	608	3	2068564
48	25.5	2.9	4.7	chr2	108534262	108534469	(133659060)	+	(CGCCC)n	Simple_repeat	1	214	(0)	2069392
2196	7.9	3.7	1.0	chr2	108718776	108719065	(133474464)	C	AluSc8	SINE/Alu	(13)	298	1	2069692
19	28.0	0.0	6.5	chr2	109129576	109129667	(133063862)	+	(GGC)n	Simple_repeat	1	92	(0)	2070333
228	26.7	5.1	4.4	chr2	109275098	109275234	(132918295)	C	Tigger15a	DNA/TcMar-Tigger	(135)	580	443	2070528
18	9.6	6.2	3.9	chr2	109614268	109614315	(132579214)	+	G-rich	Low_complexity	1	51	(0)	2070958
334	17.9	3.6	0.9	chr2	109614414	109614520	(132579009)	+	MER52D	LTR/ERV1	373	482	(1641)	2070959
191	30.9	4.2	0.0	chr2	112866518	112866585	(129326944)	+	L2b	LINE/L2	3053	3123	(252)	2075863
947	23.0	5.5	11.2	chr2	112866672	112866989	(129326540)	C	L1M5	LINE/L1	(663)	5580	5282	2075864
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
329	8.5	1.5	3.4	chr2	113602929	113603477	(128590052)	+	(CTAACC)n	Simple_repeat	1	557	(0)	2077037
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
18	9.7	0.0	5.4	chr2	113890231	113890267	(128303262)	+	(AGC)n	Simple_repeat	1	37	(0)	2077578
12	25.4	4.3	0.0	chr2	117018509	117018555	(125174974)	+	(ATTTAA)n	Simple_repeat	1	49	(0)	2081772
380	34.8	6.7	6.2	chr2	117018931	117019288	(125174241)	C	MLT1I	LTR/ERVL-MaLR	(26)	385	26	2081773
10277	11.4	1.6	8.3	chr2	118744076	118745771	(123447758)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2084192
17	8.5	2.3	6.8	chr2	119431777	119431819	(122761710)	+	(CGCCC)n	Simple_repeat	1	44	(0)	2085325
4416	17.2	5.3	3.3	chr2	119788420	119789724	(122403805)	C	L1MB3	LINE/L1	(2)	6181	4972	2085973
1259	24.8	1.7	3.3	chr2	119852196	119852499	(122341030)	+	LTR10B2	LTR/ERV1	205	503	(0)	2086066
2461	19.7	9.3	2.0	chr2	119852519	119852841	(122340688)	C	L1MDa	LINE/L1	(2866)	3671	3308	2086064
261	28.9	20.0	1.6	chr2	120274758	120275066	(121918463)	C	L1MEd	LINE/L1	(6164)	922	543	2086700
519	28.6	13.2	10.5	chr2	120275078	120275424	(121918105)	C	L1MEd	LINE/L1	(6606)	480	100	2086700
8404	21.6	4.6	4.7	chr2	123332642	123340386	(118853143)	+	L1ME2	LINE/L1	565	8049	(110)	2091623
36645	7.8	1.2	0.1	chr2	127370373	127375395	(114818134)	+	HERVK22-int	LTR/ERVK	1	5078	(1759)	2097328
286	17.9	0.0	0.0	chr2	127525408	127525474	(114668055)	C	L1MA3	LINE/L1	(0)	6305	6239	2097593
3865	15.6	12.1	0.6	chr2	128031762	128032482	(114161047)	+	LTR8B	LTR/ERV1	1	816	(4)	2098519
611	20.2	1.8	0.0	chr2	128032527	128032635	(114160894)	C	MER66C	LTR/ERV1	(80)	475	365	2098520
2384	16.0	8.9	2.0	chr2	128082518	128082977	(114110552)	+	LTR8B	LTR/ERV1	326	820	(0)	2098635
1612	15.7	8.8	5.5	chr2	128467822	128468185	(113725344)	+	LTR8A	LTR/ERV1	351	727	(0)	2099248
757	18.4	13.8	1.4	chr2	130391863	130392083	(111801446)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2372	2101762
2043	10.9	1.8	2.8	chr2	132793023	132793307	(109400222)	C	AluSp	SINE/Alu	(31)	282	1	2105067
745	20.1	1.2	2.5	chr2	132793422	132793584	(109399945)	C	MER5A1	DNA/hAT-Charlie	(4)	162	2	2105068
56	0.0	0.0	0.0	chr2	134450784	134450831	(107742698)	+	(GT)n	Simple_repeat	1	48	(0)	2107414
17	30.5	2.0	4.0	chr2	134719017	134719115	(107474414)	+	(GGCG)n	Simple_repeat	1	101	(0)	2107799
647	26.5	13.9	11.7	chr2	134796182	134796736	(107396793)	C	MLT1K	LTR/ERVL-MaLR	(26)	569	1	2107939
17	0.0	3.2	6.2	chr2	138501746	138501781	(103691748)	+	(GCC)n	Simple_repeat	1	34	(0)	2113519
15	21.8	4.8	3.1	chr2	138501781	138501842	(103691687)	+	(CGGAGC)n	Simple_repeat	1	65	(0)	2113520
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
1984	24.3	5.8	5.2	chr2	140614844	140615530	(101577999)	+	LTR8	LTR/ERV1	1	691	(0)	2116335
3225	16.1	4.4	0.2	chr2	140868880	140869422	(101324107)	+	LTR27D	LTR/ERV1	1	567	(48)	2116703
436	31.9	7.5	1.6	chr2	150156644	150156831	(92036698)	C	MIRc	SINE/MIR	(24)	244	45	2128970
2413	16.7	1.4	6.6	chr2	152503078	152503589	(89689940)	C	MER31A	LTR/ERV1	(0)	485	1	2132531
2151	13.3	0.0	0.3	chr2	152503909	152504208	(89689321)	+	AluSz6	SINE/Alu	2	300	(12)	2132532
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
15	30.4	2.5	2.4	chr2	163348534	163348613	(78844916)	+	(CTGCTT)n	Simple_repeat	1	82	(0)	2146828
3504	16.6	14.2	1.3	chr2	165056044	165056756	(77136773)	+	LTR8B	LTR/ERV1	1	820	(0)	2149165
6309	19.5	3.4	1.9	chr2	165056876	165057621	(77135908)	C	Charlie1a	DNA/hAT-Charlie	(0)	1455	712	2149166
36	0.0	0.0	0.0	chr2	165953652	165953685	(76239844)	+	(CCCGCTCA)n	Simple_repeat	1	34	(0)	2150388
14	30.3	3.8	2.4	chr2	167293036	167293115	(74900414)	+	(TGC)n	Simple_repeat	1	83	(0)	2152028
23	21.9	1.7	0.0	chr2	167293086	167293143	(74900386)	+	(CGC)n	Simple_repeat	1	59	(0)	2152029
909	20.4	16.5	1.9	chr2	169562660	169563010	(72630519)	+	LTR40b	LTR/ERVL	60	462	(0)	2155178
544	27.5	10.8	0.5	chr2	169563013	169563202	(72630327)	C	MIRb	SINE/MIR	(44)	224	13	2155179
1333	26.0	10.0	5.6	chr2	169860017	169860506	(72333023)	C	L1MEc	LINE/L1	(5344)	2302	1790	2155749
273	24.1	0.0	0.0	chr2	169860505	169860558	(72332971)	C	L1MEc	LINE/L1	(6300)	1346	1293	2155749
329	12.5	11.1	0.0	chr2	169860594	169860673	(72332856)	C	L1ME4b	LINE/L1	(704)	188	99	2155759
6519	16.1	7.8	9.7	chr2	170923016	170924305	(71269224)	C	LTR2752	LTR/ERV1	(0)	1263	1	2157489
4800	12.4	10.9	0.0	chr2	171245168	171245895	(70947634)	+	LTR8B	LTR/ERV1	1	817	(3)	2158100
2390	19.9	6.9	5.4	chr2	171245896	171245912	(70947617)	C	LTR26E	LTR/ERV1	(610)	12	1	2158099
1558	21.5	3.0	6.7	chr2	171245913	171246306	(70947223)	+	MER21C	LTR/ERVL	494	872	(66)	2158098
10671	10.0	3.4	3.6	chr2	171423289	171424872	(70768657)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2158412
28	0.0	0.0	0.0	chr2	173964014	173964039	(68229490)	+	(CTC)n	Simple_repeat	1	26	(0)	2162454
12	10.3	6.1	2.9	chr2	173964100	173964132	(68229397)	+	(GCGG)n	Simple_repeat	1	35	(0)	2162455
34	27.1	0.8	2.5	chr2	173964209	173964388	(68229141)	+	G-rich	Low_complexity	1	176	(0)	2162456
30	27.0	2.1	1.0	chr2	173964409	173964502	(68229027)	+	(GCC)n	Simple_repeat	1	96	(0)	2162457
15	28.4	0.0	0.0	chr2	173964569	173964615	(68228914)	+	G-rich	Low_complexity	1	47	(0)	2162458
18	0.0	0.0	0.0	chr2	173964685	173964706	(68228823)	+	(CGG)n	Simple_repeat	1	22	(0)	2162459
35	18.5	6.0	3.2	chr2	173964709	173964825	(68228704)	+	(CCT)n	Simple_repeat	1	124	(0)	2162460
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
1531	18.7	9.2	6.4	chr2	178111735	178112186	(64081343)	+	MER31B	LTR/ERV1	1	466	(0)	2168565
265	24.6	9.8	8.7	chr2	180083745	180083975	(62109554)	C	L1MEd	LINE/L1	(4993)	2110	1840	2171035
2477	7.3	0.0	1.0	chr2	180084051	180084350	(62109179)	+	AluY	SINE/Alu	2	298	(13)	2171036
1780	28.4	5.5	0.7	chr2	181581461	181582168	(60611361)	C	ERVL-E-int	LTR/ERVL	(1157)	4600	3738	2172885
1295	22.5	16.5	1.4	chr2	182668545	182669053	(59524476)	C	LTR18B	LTR/ERVL	(13)	601	1	2174295
792	24.3	12.1	3.0	chr2	189681579	189681841	(52511688)	+	MamRep38	DNA/hAT	1	290	(5)	2183203
268	29.5	11.6	0.8	chr2	189681878	189682000	(52511529)	+	L2a	LINE/L2	2622	2759	(660)	2183204
989	21.7	0.0	0.6	chr2	189682144	189682323	(52511206)	+	FAM	SINE/Alu	2	180	(5)	2183205
210	32.5	2.4	1.2	chr2	189762931	189763011	(52430518)	C	MIRb	SINE/MIR	(151)	117	36	2183331
338	30.5	15.6	0.0	chr2	189904185	189904335	(52289194)	C	MIRc	SINE/MIR	(0)	268	90	2183554
395	21.9	10.4	4.2	chr2	191019976	191020190	(51173339)	+	L1ME4a	LINE/L1	5819	6048	(76)	2185240
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
3284	20.3	6.3	1.7	chr2	196498444	196499218	(45694311)	+	LTR8B	LTR/ERV1	1	813	(7)	2192486
2383	11.7	0.7	0.0	chr2	197214869	197215175	(44978354)	C	AluSz6	SINE/Alu	(3)	309	1	2193580
1206	19.7	12.4	1.2	chr2	200628088	200628416	(41565113)	C	L1MC4	LINE/L1	(0)	8042	7672	2198608
2113	7.5	0.4	2.9	chr2	200888517	200888797	(41304732)	C	AluSx	SINE/Alu	(10)	302	29	2199070
369	24.6	22.1	0.0	chr2	200889717	200889903	(41303626)	C	MIR	SINE/MIR	(21)	241	2	2199072
2122	13.1	0.3	0.3	chr2	200890076	200890380	(41303149)	+	AluJb	SINE/Alu	1	305	(7)	2199073
12	20.8	4.3	2.1	chr2	203534996	203535041	(38658488)	+	(GGAGGCG)n	Simple_repeat	1	48	(0)	2204167
46	0.0	0.0	0.0	chr2	203535259	203535300	(38658229)	+	(TGAC)n	Simple_repeat	1	42	(0)	2204168
33	12.7	1.6	1.6	chr2	203535304	203535365	(38658164)	+	(GGC)n	Simple_repeat	1	63	(0)	2204169
31	25.4	4.6	2.2	chr2	203535450	203535580	(38657949)	+	(CCGCCCG)n	Simple_repeat	1	137	(0)	2204170
1863	25.0	2.3	1.7	chr2	204263016	204263495	(37930034)	+	L1ME1	LINE/L1	5651	6133	(46)	2205368
231	32.2	1.1	3.3	chr2	205751973	205752062	(36441467)	C	Plat_L3	LINE/CR1	(11)	3575	3488	2207367
23006	7.1	0.5	0.0	chr2	206411079	206416210	(35777319)	C	L1P2	LINE/L1	(1003)	5143	2	2208592
3966	17.6	6.1	3.5	chr2	207652854	207653256	(34540273)	+	L1MC1	LINE/L1	5271	5678	(655)	2210404
2017	15.6	0.0	0.0	chr2	207653257	207653545	(34539984)	+	AluJb	SINE/Alu	11	299	(13)	2210406
4206	16.1	10.1	1.2	chr2	208033828	208034573	(34158956)	+	LTR8B	LTR/ERV1	1	820	(0)	2211172
2541	7.5	0.3	0.0	chr2	208395039	208395345	(33798184)	C	AluY	SINE/Alu	(3)	308	1	2211795
23402	21.9	9.5	3.4	chr2	208395346	208395711	(33797818)	C	HUERS-P3-int	LTR/ERV1	(8030)	889	370	2211794
359	32.6	14.4	1.8	chr2	212102659	212102998	(30090531)	+	L2b	LINE/L2	2391	2780	(639)	2216500
181	37.9	11.5	3.4	chr2	212103122	212103296	(30090233)	+	L2b	LINE/L2	2979	3169	(206)	2216500
4953	17.1	1.9	1.6	chr2	212863045	212863994	(29329535)	C	L1M3f	LINE/L1	(4370)	958	6	2217519
40	30.8	3.0	2.9	chr2	213151759	213151922	(29041607)	+	(CG)n	Simple_repeat	1	165	(0)	2217871
18	22.2	1.9	1.8	chr2	213151960	213152018	(29041511)	+	(CGCC)n	Simple_repeat	1	59	(0)	2217872
15	0.0	4.5	0.0	chr2	216108018	216108039	(26085490)	+	(TGCC)n	Simple_repeat	1	23	(0)	2222197
17	14.2	0.0	0.0	chr2	216372298	216372328	(25821201)	+	(CCG)n	Simple_repeat	1	31	(0)	2222623
28	18.0	3.3	8.7	chr2	216633464	216633593	(25559936)	+	(CCG)n	Simple_repeat	1	122	(0)	2223158
26	16.8	0.0	0.0	chr2	216633550	216633598	(25559931)	+	(GCT)n	Simple_repeat	1	49	(0)	2223159
18	26.0	3.7	2.4	chr2	216633599	216633629	(25559900)	+	(CGCGGC)n	Simple_repeat	2	84	(0)	2223160
4666	13.3	7.4	0.3	chr2	217267466	217268226	(24925303)	+	LTR8B	LTR/ERV1	1	820	(0)	2224141
413	25.6	4.2	0.1	chr2	217268361	217268488	(24925041)	+	MIR3	SINE/MIR	30	156	(106)	2224142
484	12.8	3.7	0.0	chr2	222472176	222472239	(19721290)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	561	2232653
3068	14.8	7.4	8.0	chr2	222472240	222472775	(19720754)	C	LTR8B	LTR/ERV1	(0)	820	140	2232654
4858	14.1	8.5	0.3	chr2	222985362	222986113	(19207416)	C	LTR8B	LTR/ERV1	(0)	820	1	2233543
27	13.6	0.0	0.0	chr2	223602504	223602545	(18590984)	+	(A)n	Simple_repeat	1	42	(0)	2234471
16	0.0	0.0	0.0	chr2	226799140	226799157	(15394372)	+	(GC)n	Simple_repeat	1	18	(0)	2239465
13	22.4	0.0	4.4	chr2	226799274	226799318	(15394211)	+	(CGCCACC)n	Simple_repeat	1	45	(0)	2239466
33	7.2	0.0	0.0	chr2	226799349	226799392	(15394137)	+	(GCT)n	Simple_repeat	1	44	(0)	2239467
1608	15.0	8.6	0.0	chr2	230096957	230097222	(12096307)	C	AluSx	SINE/Alu	(21)	291	1	2244741
8777	9.5	0.2	2.6	chr2	230097223	230097526	(12096003)	C	L1PA16	LINE/L1	(1764)	4382	4095	2244740
3532	21.6	3.2	3.5	chr2	230097520	230098492	(12095037)	C	L1ME1	LINE/L1	(41)	6138	5171	2244742
3355	26.7	4.6	2.1	chr2	230428913	230430288	(11763241)	C	L1ME3G	LINE/L1	(4445)	1939	779	2245099
11091	9.3	1.1	0.1	chr2	233645341	233646904	(8546625)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2250762
362	21.0	2.5	13.1	chr2	237085223	237085359	(5108170)	C	L2	LINE/L2	(544)	2875	2754	2255931
182	31.5	2.7	0.0	chr2	237085499	237085571	(5107958)	C	L2b	LINE/L2	(13)	3362	3288	2255932
21	20.0	1.4	5.6	chr2	238240794	238240863	(3952666)	+	(CCCT)n	Simple_repeat	1	71	(0)	2257550
45	4.2	0.0	0.0	chr2	240025167	240025216	(2168313)	+	(CCACCCCG)n	Simple_repeat	1	50	(0)	2259594
330	21.3	13.0	0.0	chr2	240615933	240616026	(1577503)	+	MER76	LTR/ERVL	1	108	(583)	2260218
349	27.8	17.4	4.7	chr2	240616042	240616275	(1577254)	+	MER76	LTR/ERVL	364	633	(58)	2260218
566	30.6	6.0	2.5	chr2	240616384	240616624	(1576905)	C	L1MC5	LINE/L1	(491)	8813	8564	2260216
8324	4.1	2.1	0.2	chr2	241732072	241733059	(460470)	C	LTR13	LTR/ERVK	(0)	1007	1	2261638
8128	5.6	1.1	0.7	chr2	241875288	241876290	(317239)	C	LTR13	LTR/ERVK	(0)	1007	1	2261808
247	34.6	6.3	0.0	chr20	100097	100229	(64343938)	+	L2a	LINE/L2	3271	3412	(14)	2262236
522	25.4	15.4	0.0	chr20	100288	100562	(64343605)	+	Charlie2b	DNA/hAT-Charlie	1	325	(2457)	2262247
51	0.0	0.0	0.0	chr20	348485	348528	(64095639)	+	(GT)n	Simple_repeat	1	44	(0)	2262726
374	26.4	1.1	0.0	chr20	844259	844349	(63599818)	+	MIR	SINE/MIR	69	160	(102)	2263863
30	22.7	3.2	4.7	chr20	3407640	3407762	(61036405)	+	(GGCGCG)n	Simple_repeat	1	127	(0)	2268792
19	23.3	3.3	0.0	chr20	3407968	3408027	(61036140)	+	(CCCGG)n	Simple_repeat	1	62	(0)	2268793
19	30.4	3.2	3.1	chr20	3471226	3471286	(60972881)	+	(GGCCGC)n	Simple_repeat	1	61	(0)	2268953
29	8.5	1.9	1.9	chr20	3471287	3471339	(60972828)	+	(GCT)n	Simple_repeat	1	54	(0)	2268954
19	30.4	3.2	3.1	chr20	3471340	3471401	(60972766)	+	(GGCCGC)n	Simple_repeat	2	63	(0)	2268955
1789	22.4	6.4	2.5	chr20	3479589	3480036	(60964131)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2268971
349	30.6	9.7	9.1	chr20	3480037	3480120	(60964047)	C	L2b	LINE/L2	(379)	3008	2932	2268970
320	33.8	8.9	7.5	chr20	3480176	3480604	(60963563)	+	MLT1K	LTR/ERVL-MaLR	160	595	(0)	2268972
244	12.8	0.0	0.0	chr20	3480636	3480674	(60963493)	C	MLT1A0	LTR/ERVL-MaLR	(4)	361	323	2268973
602	29.2	8.2	3.0	chr20	3787034	3787404	(60656763)	C	L1ME4a	LINE/L1	(0)	6124	5733	2269489
2205	10.5	0.7	1.3	chr20	3854141	3854466	(60589701)	+	AluSz	SINE/Alu	1	312	(0)	2269649
3052	15.2	1.1	3.5	chr20	4633244	4633788	(59810379)	+	LTR26C	LTR/ERV1	1	532	(7)	2271051
2691	12.6	2.0	0.0	chr20	4633865	4634260	(59809907)	C	LTR26	LTR/ERV1	(199)	404	1	2271052
2091	19.2	10.0	3.0	chr20	5364923	5365459	(59078708)	+	LTR8	LTR/ERV1	113	691	(0)	2272450
470	19.5	2.5	0.0	chr20	5365465	5365582	(59078585)	+	LTR54	LTR/ERV1	365	485	(13)	2272449
7151	17.4	4.8	4.5	chr20	5436045	5436849	(59007318)	C	L1MC3	LINE/L1	(0)	7785	6940	2272557
1872	21.1	2.9	2.5	chr20	9055829	9056309	(55387858)	+	MLT1D	LTR/ERVL-MaLR	23	505	(0)	2278317
24	27.4	2.1	3.1	chr20	10673536	10673629	(53770538)	+	(CGC)n	Simple_repeat	1	96	(0)	2280873
612	31.9	15.9	1.1	chr20	13149647	13150010	(51294157)	+	X6B_LINE	LINE/CR1	16	443	(629)	2284439
18	0.0	0.0	0.0	chr20	15627229	15627248	(48816919)	+	(A)n	Simple_repeat	1	20	(0)	2288160
3151	13.9	13.2	2.5	chr20	15627330	15627976	(48816191)	C	LTR8A	LTR/ERV1	(0)	727	1	2288161
42	7.7	6.7	3.2	chr20	19758154	19758242	(44685925)	+	(CCT)n	Simple_repeat	1	95	(0)	2294579
307	32.9	8.9	2.0	chr20	19981019	19981164	(44463003)	C	MIRc	SINE/MIR	(5)	263	107	2294988
1129	21.9	4.5	1.4	chr20	19981263	19981564	(44462603)	C	L1MC3	LINE/L1	(436)	7349	7048	2294989
277	19.1	0.0	0.0	chr20	21166622	21166689	(43277478)	C	AluSx	SINE/Alu	(166)	136	69	2296699
1480	15.3	0.0	0.0	chr20	21166690	21166892	(43277275)	C	AluSz	SINE/Alu	(109)	203	1	2296700
674	21.3	1.4	0.0	chr20	21323813	21323953	(43120214)	+	MER58A	DNA/hAT-Charlie	46	188	(36)	2296960
25	14.9	1.9	1.8	chr20	24670192	24670245	(39773922)	+	(TTTGT)n	Simple_repeat	1	55	(0)	2301187
1740	22.3	8.3	1.5	chr20	24723788	24724311	(39719856)	C	MER89-int	LTR/ERV1	(3053)	3748	3186	2301251
2268	19.2	1.4	0.5	chr20	24724313	24724736	(39719431)	+	LTR47B2	LTR/ERVL	2	429	(5)	2301252
4591	13.7	9.0	0.1	chr20	24854002	24854748	(39589419)	+	LTR8B	LTR/ERV1	1	820	(0)	2301427
1547	23.8	5.1	9.1	chr20	24854749	24855058	(39589109)	C	MER97a	DNA/hAT-Tip100	(403)	487	182	2301420
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
24	25.8	0.0	2.6	chr20	30290568	30290644	(34153523)	+	G-rich	Low_complexity	1	77	(0)	2304833
15	14.4	0.0	0.0	chr20	30290858	30290881	(34153286)	+	(T)n	Simple_repeat	1	24	(0)	2304834
407	17.1	0.0	0.0	chr20	30290886	30290955	(34153212)	+	MER53	DNA/hAT	124	193	(0)	2304835
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
363	22.5	2.2	1.7	chr20	31573376	31573489	(32870678)	+	MIR	SINE/MIR	30	146	(62)	2306295
1695	12.7	6.9	2.8	chr20	31573504	31573794	(32870373)	C	AluJb	SINE/Alu	(3)	309	6	2306296
28	3.3	0.0	0.0	chr20	31880262	31880292	(32563875)	+	(TCCA)n	Simple_repeat	1	31	(0)	2307087
278	28.6	8.2	0.9	chr20	31880297	31880409	(32563758)	C	L2b	LINE/L2	(0)	3375	3254	2307088
2437	5.5	1.4	0.0	chr20	31880497	31880786	(32563381)	C	AluSc	SINE/Alu	(15)	294	1	2307089
460	24.0	9.3	2.4	chr20	32743631	32743826	(31700341)	+	MIRb	SINE/MIR	46	267	(1)	2309172
456	18.9	2.1	6.9	chr20	33549198	33549299	(30894868)	+	L1M4a2	LINE/L1	2	98	(2558)	2311047
1852	16.5	10.9	2.2	chr20	33549302	33549753	(30894414)	+	L1MB8	LINE/L1	5682	6177	(1)	2311048
4833	15.0	7.3	1.4	chr20	35058057	35058684	(29385483)	+	L1MB8	LINE/L1	2367	3036	(3110)	2314425
27	16.1	0.0	0.0	chr20	35741988	35742037	(28702130)	+	(TGC)n	Simple_repeat	1	50	(0)	2315914
16	14.4	2.5	2.4	chr20	35742239	35742278	(28701889)	+	(ACACAC)n	Simple_repeat	1	41	(0)	2315915
13	31.4	2.8	1.4	chr20	36745817	36745888	(27698279)	+	(GGCGG)n	Simple_repeat	1	74	(0)	2318339
47	0.0	0.0	0.0	chr20	36746080	36746121	(27698046)	+	(GCG)n	Simple_repeat	1	42	(0)	2318340
285	30.4	4.0	8.2	chr20	37262870	37262973	(27181194)	+	MIR3	SINE/MIR	9	111	(97)	2319601
2533	6.4	0.7	0.0	chr20	37262974	37263269	(27180898)	+	AluSx1	SINE/Alu	1	298	(14)	2319602
2598	27.4	6.1	3.5	chr20	38115657	38117286	(26326881)	C	L1MEd	LINE/L1	(2502)	3644	923	2321417
16	15.8	0.0	2.7	chr20	39923773	39923809	(24520358)	+	A-rich	Low_complexity	1	37	(0)	2324953
2282	20.2	7.9	1.1	chr20	39924144	39924698	(24519469)	C	L1MD3	LINE/L1	(0)	7995	7400	2324954
188	34.4	0.0	1.6	chr20	44642678	44642739	(19801428)	C	L2	LINE/L2	(610)	2809	2749	2333968
18	3.8	0.0	3.5	chr20	45061127	45061155	(19383012)	+	(ACAAA)n	Simple_repeat	1	29	(0)	2334936
1458	18.8	7.0	3.6	chr20	45061282	45061585	(19382582)	+	Tigger7	DNA/TcMar-Tigger	1	315	(2176)	2334937
10153	11.5	3.3	4.6	chr20	45399870	45401470	(19042697)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2335571
1309	27.0	10.5	9.7	chr20	46097876	46097999	(18346168)	C	L1ME3Cz	LINE/L1	(430)	567	469	2336917
2189	10.6	1.4	0.0	chr20	46098000	46098282	(18345885)	C	AluSx1	SINE/Alu	(25)	287	1	2336921
1309	25.6	10.7	5.8	chr20	46098283	46098934	(18345233)	C	L1ME3Cz	LINE/L1	(529)	468	2	2336917
790	23.3	13.4	1.6	chr20	46706243	46706389	(17737778)	C	LTR83	LTR/ERVL	(2)	778	626	2338272
4733	14.7	6.2	0.5	chr20	46706390	46707162	(17737005)	C	LTR8B	LTR/ERV1	(0)	820	1	2338273
459	22.6	2.5	0.5	chr20	46747931	46748089	(17696078)	+	MER102a	DNA/hAT-Charlie	26	198	(143)	2338365
295	17.1	0.0	0.0	chr20	46748059	46748099	(17696068)	+	AluJo	SINE/Alu	229	269	(43)	2338366
2518	8.7	0.0	0.0	chr20	46748237	46748546	(17695621)	+	AluSx1	SINE/Alu	1	310	(2)	2338367
14	26.0	0.0	3.7	chr20	49936321	49936374	(14507793)	+	(GCCCCCC)n	Simple_repeat	1	54	(0)	2345668
712	29.1	17.5	3.4	chr20	51299273	51299567	(13144600)	C	L2a	LINE/L2	(0)	3426	3064	2348848
934	21.7	0.9	13.7	chr20	51299568	51299681	(13144486)	+	MER58A	DNA/hAT-Charlie	1	95	(129)	2348849
27	0.0	0.0	0.0	chr20	51299682	51299707	(13144460)	+	(T)n	Simple_repeat	1	26	(0)	2348850
299	27.4	0.0	1.4	chr20	56344397	56344470	(8099697)	+	MIR	SINE/MIR	103	175	(87)	2358834
19	15.9	4.5	0.0	chr20	56344549	56344598	(8099569)	+	(ATA)n	Simple_repeat	1	52	(0)	2358835
13	15.9	2.7	2.6	chr20	58890745	58890781	(5553386)	+	(CCACCG)n	Simple_repeat	1	38	(0)	2363582
16	23.9	0.0	2.4	chr20	58890782	58890822	(5553345)	+	(TG)n	Simple_repeat	1	41	(0)	2363583
5091	14.6	3.3	1.8	chr20	59530096	59531136	(4913031)	+	L1MC1	LINE/L1	4892	5957	(376)	2364622
12624	13.9	6.2	3.1	chr20	59793189	59793840	(4650327)	C	L1M2	LINE/L1	(1400)	6162	5508	2365053
2227	12.5	0.0	0.7	chr20	59793841	59794143	(4650024)	+	AluSz	SINE/Alu	2	302	(10)	2365055
206	30.7	13.8	1.2	chr20	61331199	61331363	(3112804)	+	L2a	LINE/L2	2653	2841	(578)	2367236
17	24.5	1.6	3.2	chr20	62122132	62122192	(2321975)	+	(CCGC)n	Simple_repeat	1	62	(0)	2368176
198	13.0	0.6	0.0	chr20	62875203	62875521	(1568646)	+	(CCCCCA)n	Simple_repeat	1	321	(0)	2369062
406	32.0	1.5	0.0	chr20	62875523	62875650	(1568517)	+	ERVL-E-int	LTR/ERVL	1299	1428	(4239)	2369060
1037	26.2	7.7	2.8	chr20	62875746	62876142	(1568025)	+	ERVL-E-int	LTR/ERVL	1609	2026	(3688)	2369060
34	21.2	2.6	8.1	chr20	63215706	63215861	(1228306)	+	(CCGGCC)n	Simple_repeat	1	160	(0)	2369379
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
16	11.7	0.0	0.0	chr21	15064946	15064973	(31645010)	+	(CGC)n	Simple_repeat	1	28	(0)	2378615
18	8.7	0.0	0.0	chr21	16420333	16420357	(30289626)	+	(T)n	Simple_repeat	1	25	(0)	2380416
1684	22.4	3.9	0.3	chr21	17090078	17090453	(29619530)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2381203
26999	3.2	0.4	0.1	chr21	17090514	17096530	(29613453)	+	L1PA3	LINE/L1	124	6155	(0)	2381204
40	25.2	1.6	1.6	chr21	20998254	20998374	(25711609)	+	(CGC)n	Simple_repeat	1	123	(0)	2386432
15	26.1	3.0	2.9	chr21	20998431	20998497	(25711486)	+	(GGCAGC)n	Simple_repeat	1	69	(0)	2386433
2251	15.5	1.6	1.1	chr21	31611426	31611797	(15098186)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	2401731
1951	17.1	1.1	0.0	chr21	31611943	31612293	(15097690)	C	L1MB3	LINE/L1	(0)	6183	5829	2401732
250	22.8	10.5	5.9	chr21	32770718	32770892	(13939091)	C	MIR3	SINE/MIR	(58)	210	19	2403727
262	27.7	2.1	1.1	chr21	34543758	34543852	(12166131)	+	MIRb	SINE/MIR	10	105	(163)	2406798
253	22.4	13.3	0.0	chr21	34543977	34544060	(12165923)	+	MIRb	SINE/MIR	106	217	(51)	2406798
222	28.0	10.7	0.0	chr21	34544061	34544135	(12165848)	+	MER5A	DNA/hAT-Charlie	3	86	(103)	2406799
243	16.4	21.4	0.0	chr21	34544139	34544193	(12165790)	+	MLT1E3	LTR/ERVL-MaLR	1	70	(610)	2406800
1311	19.1	20.6	2.3	chr21	34544255	34544608	(12165375)	+	MLT1E3	LTR/ERVL-MaLR	189	624	(0)	2406800
2193	13.8	0.0	0.0	chr21	35841486	35841790	(10868193)	C	AluSx	SINE/Alu	(7)	305	1	2408718
2296	11.9	0.8	8.8	chr21	35841821	35842216	(10867767)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2408719
18	6.1	2.7	2.6	chr21	36662305	36662334	(10047649)	+	(TAAAATG)n	Simple_repeat	1	30	(0)	2410285
2400	7.3	0.0	4.1	chr21	36662335	36662651	(10047332)	+	AluSz	SINE/Alu	9	312	(0)	2410286
2108	12.6	0.3	1.9	chr21	36962507	36962815	(9747168)	+	AluJb	SINE/Alu	1	304	(8)	2410743
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
821	13.8	0.0	0.0	chr21	39183687	39183802	(7526181)	C	AluJo	SINE/Alu	(196)	116	1	2414126
1257	26.6	12.3	2.3	chr21	39693642	39694781	(7015202)	C	L1ME3B	LINE/L1	(3498)	2648	1239	2415031
3104	21.7	2.6	3.4	chr21	39781176	39781882	(6928101)	C	L1MC4a	LINE/L1	(1920)	5962	5262	2415171
12	9.2	0.0	4.0	chr21	42010306	42010330	(4699653)	+	(CGC)n	Simple_repeat	1	25	(0)	2418306
21	23.4	5.6	2.1	chr21	42010422	42010510	(4699473)	+	G-rich	Low_complexity	1	94	(0)	2418307
14	27.8	1.6	3.1	chr21	42010880	42010943	(4699040)	+	(GCGGCGG)n	Simple_repeat	1	65	(0)	2418308
3797	17.6	9.3	0.9	chr21	42466485	42466951	(4243032)	+	LTR8B	LTR/ERV1	293	820	(0)	2418914
942	12.2	0.7	1.4	chr21	42931263	42931403	(3778580)	C	AluJb	SINE/Alu	(170)	142	3	2419588
1046	21.8	2.5	1.6	chr21	42931407	42931649	(3778334)	+	LTR8B	LTR/ERV1	576	820	(0)	2419582
1966	12.3	0.3	3.9	chr21	43659016	43659324	(3050659)	+	AluJr	SINE/Alu	1	298	(14)	2420579
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
17	16.4	0.0	4.4	chr21	43659831	43659875	(3050108)	+	G-rich	Low_complexity	1	45	(0)	2420581
2015	26.1	12.0	3.2	chr21	45779620	45780309	(929674)	+	L1ME3	LINE/L1	4404	5183	(963)	2423183
3697	18.2	4.0	1.9	chr21	46291832	46292573	(417410)	C	LTR8B	LTR/ERV1	(0)	820	75	2423742
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
12887	13.1	6.7	9.2	chr22	17383973	17385815	(33432653)	C	Tigger1	DNA/TcMar-Tigger	(675)	1743	1	2428885
15	13.6	0.0	2.9	chr22	17774037	17774070	(33044398)	+	(CCCCTC)n	Simple_repeat	1	34	(0)	2429732
4313	14.9	2.7	7.5	chr22	17977167	17977741	(32840727)	+	L1MB7	LINE/L1	5127	5669	(515)	2429976
227	28.9	8.2	3.2	chr22	18095318	18095410	(32723058)	C	AmnSINE2	SINE/tRNA-Deu	(6)	352	255	2430212
190	20.7	6.5	1.7	chr22	18095640	18095698	(32722770)	C	UCON132b	DNA/hAT-Tip100	(18)	130	69	2430213
16	0.0	0.0	0.0	chr22	18095705	18095721	(32722747)	+	(T)n	Simple_repeat	1	17	(0)	2430214
444	24.4	23.3	3.4	chr22	18095771	18095822	(32722646)	+	MIR	SINE/MIR	1	48	(214)	2430215
2193	13.0	0.3	0.0	chr22	18095823	18096121	(32722347)	C	AluSz	SINE/Alu	(12)	300	1	2430216
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
23	14.0	2.8	6.8	chr22	19178623	19178694	(31639774)	+	G-rich	Low_complexity	1	74	(0)	2431573
2537	8.4	0.0	0.0	chr22	19316310	19316620	(31501848)	C	AluY	SINE/Alu	(0)	311	1	2431793
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
2286	12.2	0.0	0.0	chr22	19317024	19317327	(31501141)	+	AluSz	SINE/Alu	5	308	(4)	2431795
19	21.5	0.0	8.0	chr22	19478991	19479065	(31339403)	+	(CCGCC)n	Simple_repeat	1	75	(0)	2432066
18	10.7	4.5	4.3	chr22	19479140	19479183	(31339285)	+	(CCG)n	Simple_repeat	1	46	(0)	2432067
9688	18.4	6.7	3.7	chr22	19648166	19648664	(31169804)	+	L1M4	LINE/L1	1398	1883	(5634)	2432369
32	5.4	0.0	0.0	chr22	19648665	19648703	(31169765)	+	(AACAA)n	Simple_repeat	1	39	(0)	2432373
9688	18.4	6.7	3.7	chr22	19648704	19649055	(31169413)	+	L1M4	LINE/L1	1884	2241	(5276)	2432369
3905	19.2	4.8	1.8	chr22	19779977	19780770	(31037698)	C	L1MB3	LINE/L1	(0)	6291	5492	2432535
2662	5.8	0.0	0.0	chr22	19780771	19781081	(31037387)	C	AluY	SINE/Alu	(0)	311	1	2432536
2029	9.2	0.3	11.0	chr22	20023900	20024235	(30794233)	+	AluSq2	SINE/Alu	1	300	(13)	2432804
2154	14.5	2.4	0.0	chr22	20128305	20128635	(30689833)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2432938
190	25.0	2.2	0.0	chr22	21952078	21952121	(28866347)	C	MIRb	SINE/MIR	(9)	259	215	2436268
16	30.0	0.0	1.8	chr22	23786986	23787041	(27031427)	+	(GGC)n	Simple_repeat	1	56	(0)	2438970
15	18.7	0.0	10.4	chr22	23787102	23787168	(27031300)	+	(CCCCGC)n	Simple_repeat	1	67	(0)	2438971
14	22.3	0.0	4.3	chr22	23787357	23787402	(27031066)	+	G-rich	Low_complexity	1	46	(0)	2438972
291	32.9	6.1	4.3	chr22	23787518	23787679	(27030789)	C	Charlie19a	DNA/hAT-Charlie	(188)	198	34	2438973
910	28.2	13.2	1.5	chr22	24727318	24727481	(26090987)	+	MLT1E2	LTR/ERVL-MaLR	159	352	(275)	2440540
28	0.0	0.0	3.2	chr22	24727482	24727512	(26090956)	+	(CAA)n	Simple_repeat	1	31	(0)	2440541
910	28.2	13.2	1.5	chr22	24727513	24727753	(26090715)	+	MLT1E2	LTR/ERVL-MaLR	353	618	(9)	2440540
180	27.5	2.4	0.0	chr22	27170897	27170936	(23647532)	C	L2b	LINE/L2	(19)	3356	3316	2446105
588	23.4	4.7	1.4	chr22	27170955	27171097	(23647371)	+	MER5A1	DNA/hAT-Charlie	2	149	(17)	2446106
282	34.0	4.6	1.4	chr22	27171123	27171268	(23647200)	C	MIRb	SINE/MIR	(93)	175	25	2446107
2252	6.9	3.0	1.0	chr22	28672175	28672465	(22146003)	C	AluSg7	SINE/Alu	(12)	297	1	2448905
1904	11.2	6.5	1.1	chr22	28672466	28672599	(22145869)	C	AluSx3	SINE/Alu	(177)	134	1	2448904
194	29.6	3.3	5.4	chr22	29412968	29413060	(21405408)	+	L2b	LINE/L2	3282	3372	(3)	2450495
14	23.7	3.5	3.3	chr22	29883118	29883175	(20935293)	+	(GCGC)n	Simple_repeat	1	60	(0)	2451570
13	0.0	0.0	0.0	chr22	29883217	29883233	(20935235)	+	(GGC)n	Simple_repeat	1	17	(0)	2451571
223	37.3	6.9	1.8	chr22	30438502	30438722	(20379746)	+	L2	LINE/L2	2849	3081	(338)	2452612
1525	15.5	1.9	4.9	chr22	30438883	30438945	(20379523)	C	LTR8A	LTR/ERV1	(49)	678	624	2452613
2240	12.2	0.0	0.0	chr22	30438946	30439248	(20379220)	C	AluSx	SINE/Alu	(0)	312	10	2452614
16	12.1	5.6	0.0	chr22	31944032	31944067	(18874401)	+	G-rich	Low_complexity	1	38	(0)	2456006
14	5.0	0.0	0.0	chr22	31944332	31944352	(18874116)	+	(GGC)n	Simple_repeat	1	21	(0)	2456007
10421	9.4	1.3	0.9	chr22	32704054	32706269	(18112199)	C	L1PREC2	LINE/L1	(0)	6160	3943	2457540
1066	28.5	0.6	0.6	chr22	32706262	32706582	(18111886)	+	L1MEc	LINE/L1	1480	1800	(4615)	2457537
354	19.1	18.6	3.3	chr22	32810897	32811051	(18007417)	+	MIRb	SINE/MIR	43	221	(47)	2457756
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
1540	4.5	0.0	0.0	chr22	35194444	35194619	(15623849)	C	AluYh3	SINE/Alu	(8)	303	128	2462451
2074	28.5	21.1	3.6	chr22	35902956	35904342	(14914126)	+	L2c	LINE/L2	1487	3285	(102)	2463943
13	21.1	0.0	4.8	chr22	36028247	36028288	(14790180)	+	(CCG)n	Simple_repeat	1	42	(0)	2464174
12	11.3	6.9	0.0	chr22	36028709	36028737	(14789731)	+	(CCCGC)n	Simple_repeat	1	31	(0)	2464175
547	28.3	14.7	0.7	chr22	36839655	36839963	(13978505)	+	L2a	LINE/L2	3062	3421	(5)	2465975
287	23.9	4.1	0.0	chr22	36871415	36871485	(13946983)	+	MIRb	SINE/MIR	116	189	(79)	2466042
966	21.6	0.0	3.3	chr22	37438125	37438306	(13380162)	C	MER45A	DNA/hAT-Tip100	(2)	176	1	2467232
188	33.9	1.5	0.0	chr22	37438453	37438517	(13379951)	+	L3	LINE/CR1	4026	4091	(8)	2467233
187	37.5	6.8	3.8	chr22	37607894	37608209	(13210259)	+	L2b	LINE/L2	3049	3374	(1)	2467649
253	29.3	1.1	7.1	chr22	37608260	37608358	(13210110)	+	MIRb	SINE/MIR	160	252	(16)	2467650
417	35.3	6.0	2.2	chr22	37808359	37808581	(13009887)	C	MIRb	SINE/MIR	(0)	268	37	2468120
519	25.7	5.4	4.4	chr22	39525511	39525693	(11292775)	C	L2a	LINE/L2	(1)	3425	3241	2471824
261	24.2	0.0	1.5	chr22	39525845	39525911	(11292557)	C	L2a	LINE/L2	(873)	2546	2481	2471824
1968	10.2	2.6	0.8	chr22	39525950	39526213	(11292255)	+	AluSg	SINE/Alu	37	305	(5)	2471825
16	0.0	0.0	0.0	chr22	40856967	40856984	(9961484)	+	(A)n	Simple_repeat	1	18	(0)	2474500
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
17	9.4	2.6	5.1	chr22	41092447	41092484	(9725984)	+	(GCG)n	Simple_repeat	1	39	(0)	2475139
2203	8.9	1.3	3.0	chr22	41689080	41689383	(9129085)	+	AluSx1	SINE/Alu	1	299	(13)	2476517
363	20.7	4.3	0.0	chr22	42780489	42780599	(8037869)	C	BLACKJACK	DNA/hAT-Blackjack	(301)	2668	2553	2478931
2229	12.2	0.3	0.0	chr22	44552679	44552980	(6265488)	+	AluSx	SINE/Alu	2	304	(8)	2482186
2327	17.6	5.0	4.8	chr22	44552981	44553082	(6265386)	+	Tigger1	DNA/TcMar-Tigger	623	717	(1701)	2482184
4046	10.8	3.9	5.3	chr22	44553084	44553432	(6265036)	+	Tigger1	DNA/TcMar-Tigger	840	1178	(1240)	2482187
226	22.4	11.6	1.3	chr22	44871949	44872025	(5946443)	+	MIRc	SINE/MIR	28	113	(155)	2482822
2718	3.9	0.0	0.3	chr22	44872288	44872599	(5945869)	+	AluYi6	SINE/Alu	1	311	(0)	2482823
17	21.1	4.1	0.0	chr22	45671885	45671933	(5146535)	+	(CGG)n	Simple_repeat	1	51	(0)	2484357
33	19.3	0.0	3.7	chr22	45671955	45672036	(5146432)	+	(CCT)n	Simple_repeat	1	82	(0)	2484358
663	19.1	4.0	0.1	chr22	49978394	49978544	(839924)	C	FLAM_C	SINE/Alu	(93)	209	1	2490018
2792	21.0	3.6	5.4	chr22	49978552	49979325	(839143)	C	L1M4	LINE/L1	(969)	5177	4415	2490014
12	13.9	6.2	0.0	chr22	50343231	50343283	(475185)	+	(CCCCG)n	Simple_repeat	1	56	(0)	2490488
3966	14.2	6.3	1.0	chr3	3228612	3229299	(195066260)	+	LTR8A	LTR/ERV1	1	727	(0)	2497126
1122	23.1	7.2	3.7	chr3	3229300	3229385	(195066174)	C	MER113	DNA/hAT-Charlie	(426)	95	2	2497125
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
717	27.6	2.5	4.6	chr3	9604849	9605047	(188690512)	C	L1MEd	LINE/L1	(2659)	3487	3284	2507552
236	18.5	5.8	0.0	chr3	9605053	9605117	(188690442)	C	L1MB5	LINE/L1	(6)	6168	6100	2507555
2958	12.5	3.1	0.0	chr3	9605118	9605556	(188690003)	C	LTR8B	LTR/ERV1	(0)	820	368	2507556
381	29.0	7.9	6.1	chr3	11044691	11044788	(187250771)	C	MIRb	SINE/MIR	(122)	146	52	2510634
1224	25.7	6.4	3.4	chr3	11044942	11045672	(187249887)	C	LTR8B	LTR/ERV1	(14)	806	1	2510636
2294	10.7	1.0	0.0	chr3	11857019	11857318	(186438241)	C	AluSg	SINE/Alu	(7)	303	1	2512259
3425	19.1	3.0	6.9	chr3	11857319	11858393	(186437166)	C	L1ME1	LINE/L1	(490)	6187	5149	2512257
13	19.9	2.9	0.0	chr3	12004280	12004314	(186291245)	+	G-rich	Low_complexity	1	36	(0)	2512532
15	15.3	4.3	4.1	chr3	12004325	12004371	(186291188)	+	(GCCCC)n	Simple_repeat	1	49	(0)	2512533
958	9.2	0.8	0.0	chr3	13283520	13283649	(185011910)	+	AluJo	SINE/Alu	1	131	(181)	2514963
351	23.9	9.4	2.9	chr3	13283918	13284124	(185011435)	C	L1M5	LINE/L1	(2980)	3166	2945	2514964
14	7.2	0.0	8.6	chr3	14402533	14402567	(183892992)	+	(CCCGG)n	Simple_repeat	1	35	(0)	2516883
1942	6.1	0.0	3.7	chr3	14650960	14651204	(183644355)	C	AluSx3	SINE/Alu	(75)	236	1	2517399
200	20.5	0.0	0.0	chr3	14651242	14651280	(183644279)	+	MIR	SINE/MIR	224	262	(0)	2517393
314	28.6	6.1	2.6	chr3	14822749	14822938	(183472621)	C	MamRep434	DNA/TcMar-Tigger	(75)	351	155	2517666
1221	12.1	2.9	0.3	chr3	16082515	16082793	(182212766)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	2519900
83	32.4	1.4	4.3	chr3	16082794	16082879	(182212680)	+	(GGT)n	Simple_repeat	1	85	(0)	2519901
938	18.9	0.7	0.0	chr3	16082880	16083032	(182212527)	C	AluJo	SINE/Alu	(22)	290	137	2519902
83	32.4	1.4	4.3	chr3	16083033	16083382	(182212177)	+	(GGT)n	Simple_repeat	2	339	(0)	2519903
23	9.7	0.0	0.0	chr3	18424925	18424957	(179870602)	+	(GT)n	Simple_repeat	1	33	(0)	2523266
17	20.3	2.2	0.0	chr3	18424958	18424966	(179870593)	+	(GAGTGT)n	Simple_repeat	4	46	(0)	2523267
36	22.6	4.0	2.3	chr3	18425062	18425128	(179870431)	+	(GCCGCT)n	Simple_repeat	1	108	(21)	2523268
21	20.8	0.0	0.0	chr3	18425129	18425174	(179870385)	+	(GCT)n	Simple_repeat	1	46	(0)	2523269
24	32.4	2.1	4.1	chr3	23945008	23945149	(174350410)	+	GA-rich	Low_complexity	1	145	(0)	2531073
18	6.0	8.6	0.0	chr3	23945493	23945527	(174350032)	+	(CGG)n	Simple_repeat	1	38	(0)	2531074
13	23.8	2.2	2.1	chr3	24495068	24495113	(173800446)	+	(CCCCG)n	Simple_repeat	1	47	(0)	2531965
13	5.3	0.0	0.0	chr3	24495218	24495237	(173800322)	+	(GCG)n	Simple_repeat	1	20	(0)	2531966
16	15.2	6.5	2.0	chr3	24495301	24495346	(173800213)	+	(CCG)n	Simple_repeat	1	49	(0)	2531967
12	8.1	3.6	3.5	chr3	24495702	24495729	(173799830)	+	(GCCCG)n	Simple_repeat	1	29	(0)	2531968
306	30.3	5.0	8.8	chr3	24531179	24531365	(173764194)	C	L2c	LINE/L2	(141)	3234	3059	2532037
908	20.0	0.0	1.3	chr3	24531402	24531556	(173764003)	C	AluJb	SINE/Alu	(23)	289	137	2532038
30	0.0	0.0	0.0	chr3	24531557	24531584	(173763975)	+	(T)n	Simple_repeat	1	28	(0)	2532039
250	33.0	4.4	2.7	chr3	24531712	24531823	(173763736)	C	L2c	LINE/L2	(486)	2933	2820	2532037
7773	18.4	6.4	4.3	chr3	25672875	25674906	(172620653)	C	MER52A	LTR/ERV1	(0)	2123	10	2533644
15	19.6	8.2	1.5	chr3	29280643	29280703	(169014856)	+	(CCTT)n	Simple_repeat	1	66	(0)	2538963
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
49	27.8	0.0	0.0	chr3	29281115	29281236	(169014323)	+	(TTTT)n	Simple_repeat	1	122	(0)	2538965
388	23.3	10.8	1.7	chr3	29408978	29409095	(168886464)	C	MIR3	SINE/MIR	(5)	203	74	2539129
5463	14.1	11.2	1.4	chr3	30275238	30276997	(168018562)	+	MER41-int	LTR/ERV1	1	2017	(3929)	2540324
860	23.4	6.3	3.7	chr3	31464982	31465198	(166830361)	+	MIR	SINE/MIR	2	224	(38)	2542138
3158	18.1	8.4	4.1	chr3	32917186	32917658	(165377901)	C	LTR27D	LTR/ERV1	(48)	567	188	2544939
2266	9.2	1.4	0.0	chr3	32917659	32917950	(165377609)	+	AluSp	SINE/Alu	1	296	(17)	2544940
29	25.1	5.2	1.6	chr3	33440050	33440165	(164855394)	+	(GCC)n	Simple_repeat	1	122	(0)	2545866
26	24.9	1.2	2.4	chr3	33440394	33440477	(164855082)	+	(CGCCC)n	Simple_repeat	1	85	(0)	2545867
1232	20.6	0.0	0.0	chr3	33492943	33493161	(164802398)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2545961
8223	15.2	3.1	12.2	chr3	35027376	35028557	(163267002)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	418	2548188
463	24.8	6.1	4.4	chr3	36904789	36904948	(161390611)	+	LTR16A1	LTR/ERVL	1	163	(293)	2550598
2538	5.0	0.3	1.0	chr3	36905008	36905307	(161390252)	+	AluY	SINE/Alu	1	298	(13)	2550599
11450	9.6	2.0	0.8	chr3	37567421	37568981	(160726578)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2551773
311	2.6	0.0	11.6	chr3	37568982	37569024	(160726535)	C	THE1B	LTR/ERVL-MaLR	(0)	381	321	2551773
2242	12.1	4.7	2.5	chr3	37569046	37569401	(160726158)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2551774
474	33.1	12.7	3.7	chr3	39482779	39483236	(158812323)	+	L2a	LINE/L2	2922	3426	(0)	2554610
778	17.2	13.6	5.5	chr3	40262923	40263247	(158032312)	+	MER31B	LTR/ERV1	1	466	(0)	2555664
340	28.4	2.2	0.0	chr3	40263255	40263342	(158032217)	+	L1ME4b	LINE/L1	801	890	(2)	2555665
22	21.4	0.0	4.6	chr3	40309721	40309785	(157985774)	+	(CCT)n	Simple_repeat	1	65	(0)	2555737
373	27.4	7.8	3.0	chr3	42772835	42773074	(155522485)	+	MIRc	SINE/MIR	2	259	(9)	2559634
1486	10.3	0.5	0.5	chr3	43173568	43173772	(155121787)	+	MER30	DNA/hAT-Charlie	26	230	(0)	2560255
2367	12.8	10.2	1.6	chr3	43173773	43174209	(155121350)	+	LTR8A	LTR/ERV1	249	727	(0)	2560254
1234	27.2	10.2	0.4	chr3	43174217	43174744	(155120815)	+	L1ME3G	LINE/L1	211	796	(128)	2560256
13	28.4	2.2	6.5	chr3	44477552	44477642	(153817917)	+	(GCC)n	Simple_repeat	1	93	(0)	2562165
13	5.3	0.0	0.0	chr3	44975979	44975998	(153319561)	+	(CCG)n	Simple_repeat	1	20	(0)	2562982
286	29.1	4.5	6.6	chr3	46632880	46633015	(151662544)	+	MLT1I	LTR/ERVL-MaLR	124	256	(293)	2565713
297	21.1	10.3	4.6	chr3	46633138	46633246	(151662313)	+	MLT1I	LTR/ERVL-MaLR	273	388	(23)	2565713
221	32.2	10.6	2.8	chr3	48439822	48440003	(149855556)	+	L2	LINE/L2	2883	3080	(339)	2569308
1556	14.6	0.3	6.7	chr3	49468837	49468986	(148826573)	C	AluJb	SINE/Alu	(179)	133	1	2571450
1210	27.1	10.5	4.0	chr3	50718024	50718749	(147576810)	C	L1M7	LINE/L1	(416)	1939	1145	2573463
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
1728	15.4	1.6	9.8	chr3	53219552	53219889	(145075670)	+	AluJb	SINE/Alu	3	312	(0)	2577238
235	29.1	7.1	3.3	chr3	53881582	53881702	(144413857)	C	MIRb	SINE/MIR	(25)	243	118	2578191
19	8.9	3.5	8.5	chr3	53882033	53882089	(144413470)	+	(CTTCTC)n	Simple_repeat	1	59	(0)	2578192
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
455	28.3	6.5	3.9	chr3	63519249	63519428	(134776131)	+	MIRb	SINE/MIR	36	220	(48)	2594186
425	30.6	4.6	1.8	chr3	64392124	64392296	(133903263)	C	MIR	SINE/MIR	(10)	258	82	2595652
311	31.0	1.6	3.0	chr3	64489669	64489875	(133805684)	+	MIR	SINE/MIR	35	242	(26)	2595830
299	34.1	12.3	3.0	chr3	65209459	65209627	(133085932)	C	MIR3	SINE/MIR	(13)	195	9	2597057
18	4.7	0.0	0.0	chr3	69541418	69541439	(128754120)	+	(GA)n	Simple_repeat	1	22	(0)	2604352
34	23.6	3.3	3.2	chr3	71725243	71725363	(126570196)	+	(GGC)n	Simple_repeat	1	125	(0)	2607701
1332	28.6	8.2	1.4	chr3	71989248	71989737	(126305822)	+	LTR16D	LTR/ERVL	126	651	(0)	2608228
17	6.3	5.7	2.7	chr3	72888033	72888067	(125407492)	+	(CCT)n	Simple_repeat	1	37	(0)	2610136
5556	14.9	2.2	0.3	chr3	74603657	74605410	(123690149)	+	L1MA8	LINE/L1	4477	6269	(22)	2612997
671	31.2	11.9	3.1	chr3	74605455	74605943	(123689616)	C	MLT1H	LTR/ERVL-MaLR	(11)	538	1	2612998
3228	22.7	4.1	2.0	chr3	75207679	75208464	(123087095)	C	L1MDa	LINE/L1	(5011)	1622	807	2613854
2353	12.5	0.4	1.0	chr3	75208660	75209168	(123086391)	+	MER61-int	LTR/ERV1	4669	5217	(0)	2613856
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
369	34.1	5.3	1.6	chr3	76884326	76884453	(121411106)	C	L2b	LINE/L2	(14)	3361	3229	2616146
9291	10.0	0.2	0.2	chr3	77129291	77130575	(121164984)	C	HSMAR1	DNA/TcMar-Mariner	(0)	1287	3	2616495
627	31.2	4.9	2.2	chr3	80285529	80285885	(118009674)	C	L1ME1	LINE/L1	(6003)	397	31	2620568
841	16.8	0.6	3.7	chr3	80324738	80324898	(117970661)	+	MSTB	LTR/ERVL-MaLR	277	432	(0)	2620604
7393	21.1	5.0	1.1	chr3	80324899	80326478	(117969081)	+	MSTB-int	LTR/ERVL-MaLR	1	1645	(6)	2620604
225	28.4	20.0	0.0	chr3	82138197	82138400	(116157159)	+	MIR1_Amn	SINE/MIR	14	268	(0)	2623008
2006	14.1	0.0	1.8	chr3	94905361	94905644	(103389915)	C	AluSz	SINE/Alu	(33)	279	1	2634844
703	26.3	3.8	0.0	chr3	97626983	97627161	(100668398)	C	MIR	SINE/MIR	(5)	257	72	2638041
1004	26.1	10.9	0.6	chr3	97627167	97627528	(100668031)	C	L2a	LINE/L2	(0)	3426	3023	2638042
259	28.2	10.7	1.7	chr3	97627566	97627684	(100667875)	+	MER94	DNA/hAT-Blackjack	4	134	(0)	2638043
10309	13.1	1.2	3.5	chr3	99398102	99399768	(98895791)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2640200
20	8.4	5.3	0.0	chr3	99876079	99876116	(98419443)	+	(GCCGGG)n	Simple_repeat	1	40	(0)	2640829
18	29.8	0.0	0.0	chr3	99876246	99876302	(98419257)	+	(GCG)n	Simple_repeat	1	57	(0)	2640830
10340	12.1	4.2	0.2	chr3	101307730	101309292	(96986267)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2642847
1903	15.2	3.2	8.3	chr3	101309295	101309690	(96985869)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2642848
769	31.9	13.3	4.6	chr3	102617064	102617519	(95678040)	C	MamGypLTR1c	LTR/Gypsy	(8)	795	294	2644775
233	16.7	11.2	0.0	chr3	102617549	102617628	(95677931)	C	MamGypLTR1c	LTR/Gypsy	(630)	183	96	2644775
1064	31.9	8.1	1.4	chr3	102617708	102617825	(95677734)	+	LTR16A	LTR/ERVL	1	126	(325)	2644776
3964	15.3	9.9	0.9	chr3	102617826	102618571	(95676988)	C	LTR8B	LTR/ERV1	(0)	820	1	2644777
201	36.2	0.0	7.1	chr3	102696675	102696787	(95598772)	+	L2b	LINE/L2	3256	3360	(15)	2644899
3843	16.9	10.5	1.7	chr3	102696939	102697196	(95598363)	C	LTR8B	LTR/ERV1	(0)	820	558	2644900
22	14.7	2.2	0.0	chr3	107928125	107928169	(90367390)	+	(AACA)n	Simple_repeat	1	46	(0)	2651545
11501	9.8	1.0	0.8	chr3	108432358	108433511	(89862048)	+	THE1B-int	LTR/ERVL-MaLR	426	1580	(0)	2652264
729	31.3	7.5	1.4	chr3	108604738	108605232	(89690327)	+	L1ME4c	LINE/L1	353	779	(51)	2652535
2176	13.3	1.2	1.8	chr3	108605448	108605783	(89689776)	C	MER1B	DNA/hAT-Charlie	(3)	336	3	2652536
23257	11.1	1.7	1.5	chr3	111467917	111474277	(86821282)	C	L1PA10	LINE/L1	(4)	7599	1	2656542
15	24.9	1.9	1.8	chr3	112086265	112086318	(86209241)	+	(CCGCT)n	Simple_repeat	1	55	(0)	2657367
732	28.7	4.6	4.6	chr3	113168823	113169125	(85126434)	+	MER121	DNA/hAT?	2	304	(97)	2658844
22	10.0	4.7	0.0	chr3	113838845	113838887	(84456672)	+	(GGTGC)n	Simple_repeat	1	45	(0)	2659865
1320	21.6	6.5	4.2	chr3	117203538	117203895	(81091664)	+	MER63D	DNA/hAT-Blackjack	1	367	(694)	2664557
16	14.6	0.0	6.8	chr3	123961449	123961492	(74334067)	+	G-rich	Low_complexity	1	44	(0)	2674568
4172	15.2	4.7	1.7	chr3	125351576	125352552	(72943007)	+	L1MB8	LINE/L1	5161	6165	(13)	2676825
4146	14.6	3.0	0.1	chr3	125944489	125945168	(72350391)	C	L1MB3	LINE/L1	(3)	6180	5481	2677925
732	21.2	4.4	2.2	chr3	125945177	125945355	(72350204)	C	AluJr	SINE/Alu	(10)	302	120	2677926
1083	17.1	7.9	0.0	chr3	125945360	125945674	(72349885)	C	L1MB3	LINE/L1	(701)	5482	5129	2677925
10352	17.1	2.7	3.2	chr3	126167924	126170497	(72125062)	+	LTR25-int	LTR/ERV1	4463	6894	(524)	2678209
2161	17.7	7.4	1.0	chr3	126477486	126478204	(71817355)	+	L1M4	LINE/L1	4868	5634	(540)	2678643
703	20.4	6.2	0.0	chr3	126478205	126478341	(71817218)	C	FAM	SINE/Alu	(39)	146	1	2678644
517	26.1	2.1	0.7	chr3	126478344	126478482	(71817077)	C	MLT1H1	LTR/ERVL-MaLR	(414)	141	1	2678645
2094	8.4	2.1	1.4	chr3	128680350	128680635	(69614924)	C	AluSg	SINE/Alu	(22)	288	1	2682211
14138	15.9	3.5	4.9	chr3	128857767	128859679	(69435880)	C	HERV3-int	LTR/ERV1	(6538)	1888	2	2682563
2833	13.0	5.8	1.5	chr3	128859680	128860156	(69435403)	C	LTR4	LTR/ERV1	(0)	596	98	2682563
1726	26.4	6.7	7.1	chr3	132378204	132378970	(65916589)	C	L1MEb	LINE/L1	(5420)	780	43	2688387
1513	27.4	11.3	2.3	chr3	132378973	132379655	(65915904)	C	HAL1ME	LINE/L1	(1672)	793	42	2688384
13	16.3	0.0	5.3	chr3	132722182	132722219	(65573340)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	2688838
94	26.2	5.3	4.3	chr3	132722403	132722890	(65572669)	+	G-rich	Low_complexity	1	514	(0)	2688839
2116	11.5	0.7	0.0	chr3	134399135	134399421	(63896138)	C	AluSx1	SINE/Alu	(23)	289	1	2691395
2038	21.4	0.5	12.0	chr3	134399422	134399582	(63895977)	C	L1ME1	LINE/L1	(1193)	4953	4844	2691393
7004	14.9	1.9	2.1	chr3	134399583	134401164	(63894395)	+	L1M2	LINE/L1	4132	5703	(597)	2691396
13957	16.1	4.5	3.2	chr3	134500126	134505834	(63789725)	C	L1PA17	LINE/L1	(192)	7393	1708	2691565
330	36.2	2.7	4.4	chr3	134647948	134648401	(63647158)	+	MLT1N2	LTR/ERVL-MaLR	117	562	(0)	2691731
16	12.7	0.0	5.3	chr3	134796610	134796647	(63498912)	+	(CCCGCC)n	Simple_repeat	1	38	(0)	2691966
1452	28.4	3.5	5.6	chr3	135653863	135654599	(62640960)	+	L1MEg	LINE/L1	2023	2726	(4607)	2693165
489	15.8	4.0	0.0	chr3	135654621	135654715	(62640844)	+	L1M1	LINE/L1	35	133	(7432)	2693166
16060	13.1	2.2	2.7	chr3	135654714	135657378	(62638181)	+	L1M1	LINE/L1	1100	3746	(3819)	2693166
11	22.5	2.2	4.3	chr3	136195597	136195642	(62099917)	+	(GGCGGC)n	Simple_repeat	1	47	(0)	2693943
2323	12.0	3.6	2.0	chr3	136762131	136762487	(61533072)	+	THE1B	LTR/ERVL-MaLR	2	364	(0)	2695026
1902	18.9	5.4	3.2	chr3	138421825	138422254	(59873305)	+	MLT1C	LTR/ERVL-MaLR	28	467	(0)	2697513
289	31.9	7.1	4.9	chr3	138422255	138422286	(59873273)	+	L1M5	LINE/L1	3345	3376	(2770)	2697514
3081	15.0	13.6	4.0	chr3	138422287	138422940	(59872619)	C	LTR8A	LTR/ERV1	(0)	727	1	2697515
1429	16.5	3.6	8.1	chr3	138607872	138608192	(59687367)	C	AluJb	SINE/Alu	(5)	307	2	2697786
309	33.3	8.2	4.5	chr3	138608193	138608356	(59687203)	C	L2b	LINE/L2	(216)	3159	2988	2697783
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
13	22.5	2.3	2.3	chr3	138609063	138609105	(59686454)	+	(GCG)n	Simple_repeat	1	44	(0)	2697788
24	15.8	0.0	3.8	chr3	141051386	141051438	(57244121)	+	(GGC)n	Simple_repeat	1	53	(0)	2701695
528	29.0	8.7	1.0	chr3	141052264	141052465	(57243094)	+	MIR	SINE/MIR	44	262	(0)	2701696
445	27.4	6.7	0.7	chr3	141988394	141988547	(56307012)	C	L1MEg1	LINE/L1	(5976)	259	96	2703304
2328	8.3	5.5	0.0	chr3	141988660	141988948	(56306611)	C	AluSc	SINE/Alu	(2)	307	2	2703305
3554	24.7	15.9	3.5	chr3	142850350	142851813	(55443746)	C	L2	LINE/L2	(1086)	2333	655	2704788
22	0.0	0.0	0.0	chr3	145808059	145808082	(52487477)	+	(T)n	Simple_repeat	1	24	(0)	2708760
12	6.9	5.9	5.6	chr3	146544852	146544885	(51750674)	+	(GGAACT)n	Simple_repeat	1	36	(0)	2709708
2439	10.6	0.0	0.0	chr3	150088148	150088440	(48207119)	C	AluSz	SINE/Alu	(9)	303	11	2714660
1090	25.6	9.5	7.8	chr3	150088453	150089173	(48206386)	C	HAL1	LINE/L1	(965)	1542	808	2714661
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
12102	8.6	0.3	0.7	chr3	159755557	159757142	(38538417)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2728688
647	29.9	8.5	1.3	chr3	160180111	160180558	(38115001)	+	L1ME4a	LINE/L1	5640	6122	(2)	2729410
22	16.8	1.8	3.5	chr3	160755496	160755552	(37540007)	+	G-rich	Low_complexity	1	58	(0)	2730311
17	23.0	0.0	0.0	chr3	160755990	160756030	(37539529)	+	(GCT)n	Simple_repeat	1	41	(0)	2730312
317	29.9	6.5	2.5	chr3	160928359	160928519	(37367040)	+	MLT1K	LTR/ERVL-MaLR	196	363	(232)	2730573
1465	20.6	10.5	0.5	chr3	160928570	160928936	(37366623)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2730574
32	0.0	0.0	0.0	chr3	161221959	161221988	(37073571)	+	(T)n	Simple_repeat	1	30	(0)	2731018
1434	26.2	1.1	2.2	chr3	164368147	164368501	(33927058)	C	MER77	LTR/ERVL	(0)	604	254	2734810
1753	26.6	5.3	6.1	chr3	164368522	164369145	(33926414)	+	MER77B	LTR/ERVL	55	673	(27)	2734811
18	13.2	0.0	0.0	chr3	167051391	167051423	(31244136)	+	(CAA)n	Simple_repeat	1	33	(0)	2738237
1501	13.1	7.7	9.8	chr3	167051520	167051866	(31243693)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2738238
11396	9.3	2.3	0.0	chr3	169444646	169446188	(28849371)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2741335
22	20.9	0.0	0.0	chr3	169665787	169665827	(28629732)	+	A-rich	Low_complexity	1	41	(0)	2741636
401	26.9	17.8	4.4	chr3	170043859	170044076	(28251483)	+	Charlie8	DNA/hAT-Charlie	176	438	(1990)	2742267
2213	12.5	6.4	0.8	chr3	174044711	174045064	(24250495)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	2748408
9975	13.1	2.7	2.0	chr3	174045065	174045167	(24250392)	C	THE1D-int	LTR/ERVL-MaLR	(1476)	104	1	2748407
2048	16.9	0.5	4.1	chr3	174045168	174045556	(24250003)	C	THE1D	LTR/ERVL-MaLR	(0)	375	1	2748407
12	24.9	2.0	3.9	chr3	179148365	179148415	(19147144)	+	(TGC)n	Simple_repeat	1	52	(0)	2755688
18	28.2	1.3	2.6	chr3	179148416	179148454	(19147105)	+	(CCGCTG)n	Simple_repeat	5	92	(0)	2755689
12	5.5	0.0	0.0	chr3	179148530	179148548	(19147011)	+	(CGC)n	Simple_repeat	1	19	(0)	2755690
3981	13.1	4.4	2.7	chr3	185254520	185255232	(13040327)	+	LTR8A	LTR/ERV1	1	726	(1)	2766053
2095	13.2	1.4	5.5	chr3	185255286	185255669	(13039890)	C	MER51B	LTR/ERV1	(9)	368	1	2766054
36	23.5	0.0	0.0	chr3	187745323	187745401	(10550158)	+	(AGC)n	Simple_repeat	1	79	(0)	2770635
21	17.3	0.0	0.0	chr3	190120671	190120711	(8174848)	+	(GCA)n	Simple_repeat	1	41	(0)	2774610
301	31.1	8.4	8.8	chr3	194486407	194486656	(3808903)	+	L1MDb	LINE/L1	511	759	(5650)	2781194
16	23.6	4.4	2.8	chr3	194486657	194486724	(3808835)	+	(CGCCGC)n	Simple_repeat	1	71	(0)	2781195
14	18.3	2.7	0.0	chr3	194486839	194486875	(3808684)	+	G-rich	Low_complexity	1	38	(0)	2781196
1507	16.3	3.4	0.0	chr3	195023836	195024123	(3271436)	C	L1MA8	LINE/L1	(0)	6291	5994	2782247
215	34.3	10.8	0.0	chr3	195204898	195205005	(3090554)	C	MIRc	SINE/MIR	(35)	233	113	2782538
2628	17.3	11.3	1.5	chr3	195205108	195205580	(3089979)	+	L1MD1	LINE/L1	5565	6100	(142)	2782539
3863	17.1	2.8	2.2	chr3	195608808	195609530	(2686029)	+	LTR8A	LTR/ERV1	1	727	(0)	2783356
18041	14.5	17.0	14.5	chr3	195609531	195609580	(2685979)	+	MER4-int	LTR/ERV1	4648	4771	(1827)	2783350
300	9.8	0.0	3.8	chr3	195609581	195609633	(2685926)	C	L1MA7	LINE/L1	(113)	6178	6128	2783357
996	14.6	3.8	0.0	chr3	195609635	195609785	(2685774)	C	AluSx	SINE/Alu	(0)	312	156	2783358
414	26.0	5.5	6.4	chr3	196408288	196408505	(1887054)	+	L1ME4c	LINE/L1	293	508	(322)	2784941
2850	25.6	6.9	3.0	chr3	196408539	196409643	(1885916)	C	L1MEd	LINE/L1	(5422)	1664	513	2784942
13	12.5	0.0	0.0	chr3	196739832	196739857	(1555702)	+	(GCCCC)n	Simple_repeat	1	26	(0)	2785665
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
15	15.2	0.0	9.4	chr3	196867773	196867825	(1427734)	+	G-rich	Low_complexity	1	53	(0)	2785946
13	13.1	0.0	0.0	chr3	197922109	197922133	(373426)	+	(TCTT)n	Simple_repeat	1	25	(0)	2787798
2245	10.8	0.0	0.0	chr3	197922424	197922710	(372849)	+	AluSx	SINE/Alu	1	287	(25)	2787799
215	30.9	6.8	0.0	chr4	1078084	1078151	(189136404)	+	MIR	SINE/MIR	156	228	(34)	2789838
31	21.1	5.0	4.0	chr4	1684328	1684446	(188530109)	+	(CCG)n	Simple_repeat	1	125	(0)	2790462
1201	25.2	8.4	0.5	chr4	3863584	3863958	(186350597)	C	L1MA9	LINE/L1	(453)	5859	5453	2793734
456	26.5	2.1	1.4	chr4	7172179	7172316	(183042239)	+	Tigger18a	DNA/TcMar-Tigger	714	852	(0)	2799746
1273	21.4	7.8	0.3	chr4	7172595	7172890	(183041665)	C	MLT1C	LTR/ERVL-MaLR	(8)	459	140	2799747
370	28.9	5.5	6.0	chr4	7515810	7515993	(182698562)	+	MIR3	SINE/MIR	7	189	(19)	2800256
1139	13.9	6.8	2.1	chr4	13081556	13081861	(177132694)	C	THE1D	LTR/ERVL-MaLR	(4)	377	15	2808767
7512	11.1	1.3	0.3	chr4	13081869	13082999	(177131556)	C	THE1D-int	LTR/ERVL-MaLR	(486)	1145	3	2808767
2425	15.5	2.8	0.7	chr4	13508476	13508892	(176705663)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2809413
2552	21.4	2.8	3.8	chr4	13508893	13509787	(176704768)	+	MSTB-int	LTR/ERVL-MaLR	1	867	(868)	2809413
760	28.1	9.9	0.3	chr4	19111868	19112167	(171102388)	C	HAL1	LINE/L1	(708)	1799	1468	2818994
50	0.0	0.0	0.0	chr4	19112180	19112222	(171102333)	+	(TG)n	Simple_repeat	1	43	(0)	2818995
26	17.7	0.0	0.0	chr4	19112409	19112454	(171102101)	+	(TG)n	Simple_repeat	1	46	(0)	2818996
1910	15.6	6.0	2.2	chr4	19827423	19827788	(170386767)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2820099
7692	12.7	5.0	4.4	chr4	19827791	19829055	(170385500)	+	THE1D-int	LTR/ERVL-MaLR	3	1274	(306)	2820099
646	29.9	7.8	8.4	chr4	25093020	25093509	(165121046)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	124	2828287
849	17.8	0.0	0.0	chr4	25223697	25223831	(164990724)	+	FLAM_C	SINE/Alu	1	135	(8)	2828528
914	20.6	0.0	2.7	chr4	25223832	25223883	(164990672)	+	AluJr	SINE/Alu	122	173	(139)	2828529
3505	12.0	5.9	10.9	chr4	25223884	25224596	(164989959)	C	LTR76	LTR/ERV1	(0)	675	1	2828530
31	28.6	1.8	0.9	chr4	26319397	26319507	(163895048)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	2830848
4195	16.7	7.8	0.4	chr4	29157694	29158452	(161056103)	C	LTR8B	LTR/ERV1	(0)	820	1	2835017
1754	25.0	4.8	1.8	chr4	37884873	37885355	(152329200)	C	L2a	LINE/L2	(226)	3200	2706	2846880
12409	7.3	0.7	0.0	chr4	39370497	39372065	(150842490)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2849480
22	21.2	4.6	0.0	chr4	39698238	39698302	(150516253)	+	(GGCGGT)n	Simple_repeat	1	68	(0)	2850244
14	13.6	0.0	5.6	chr4	39698529	39698564	(150515991)	+	(TCCCC)n	Simple_repeat	1	36	(0)	2850245
12	19.9	0.0	0.0	chr4	40056774	40056802	(150157753)	+	(CCCG)n	Simple_repeat	1	29	(0)	2851169
1446	23.3	19.1	2.1	chr4	41826442	41826940	(148387615)	+	LTR50	LTR/ERVL	43	652	(143)	2854686
2307	10.8	0.0	0.0	chr4	48265516	48265812	(141948743)	C	AluSx	SINE/Alu	(15)	297	1	2863586
2902	25.6	11.0	8.3	chr4	48265813	48266571	(141947984)	+	HAL1	LINE/L1	1282	2095	(412)	2863584
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
4871	12.1	6.2	0.8	chr4	55927894	55928668	(134285887)	+	LTR8B	LTR/ERV1	1	820	(0)	2871715
783	34.0	13.5	4.5	chr4	55928669	55929184	(134285371)	+	L3	LINE/CR1	3507	4080	(19)	2871714
2701	17.4	17.3	1.0	chr4	62348598	62349282	(127865273)	+	LTR8B	LTR/ERV1	1	820	(0)	2880669
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
19	11.6	0.0	0.0	chr4	71211764	71211791	(119002764)	+	(T)n	Simple_repeat	1	28	(0)	2891929
3538	18.7	11.8	0.1	chr4	71630696	71631419	(118583136)	C	LTR8B	LTR/ERV1	(0)	820	1	2892455
1005	28.1	13.8	1.5	chr4	73712203	73712657	(116501898)	C	L2a	LINE/L2	(840)	2579	2060	2895245
202	37.4	2.1	2.1	chr4	73712639	73712731	(116501824)	+	MIRb	SINE/MIR	142	234	(34)	2895246
251	26.5	5.7	2.4	chr4	74932832	74932916	(115281639)	+	L2c	LINE/L2	3291	3378	(9)	2896884
24	7.9	2.4	2.3	chr4	74933047	74933088	(115281467)	+	(GGC)n	Simple_repeat	1	43	(0)	2896885
777	27.2	12.3	2.6	chr4	76300397	76301274	(113913281)	C	L1ME3Cz	LINE/L1	(266)	731	1	2899040
1613	12.6	1.4	0.0	chr4	77120764	77120970	(113093585)	C	AluSx	SINE/Alu	(102)	210	1	2900403
540	23.3	4.2	3.6	chr4	77121290	77121454	(113093101)	C	MLT1J1	LTR/ERVL-MaLR	(278)	166	1	2900404
10179	12.8	2.3	0.5	chr4	79788184	79789733	(110424822)	+	THE1C-int	LTR/ERVL-MaLR	3	1580	(0)	2904023
3950	14.9	12.7	1.5	chr4	82728176	82728902	(107485653)	+	LTR8B	LTR/ERV1	1	820	(0)	2908126
208	39.4	1.0	0.0	chr4	82728942	82729040	(107485515)	C	L2c	LINE/L2	(219)	3168	3069	2908127
1572	17.5	0.8	15.1	chr4	82787580	82787746	(107426809)	+	MLT1A0	LTR/ERVL-MaLR	1	148	(217)	2908239
2800	12.5	5.5	1.3	chr4	83002498	83002951	(107211604)	+	Tigger2	DNA/TcMar-Tigger	2245	2718	(0)	2908638
4469	13.8	11.0	0.3	chr4	83139477	83140208	(107074347)	C	LTR8B	LTR/ERV1	(0)	820	1	2908938
12	20.8	8.0	0.0	chr4	84582715	84582764	(105631791)	+	(GCCTCC)n	Simple_repeat	1	54	(0)	2911313
18	26.4	0.0	7.9	chr4	84966648	84966680	(105247875)	+	(TCC)n	Simple_repeat	1	43	(46)	2911910
13	9.3	0.0	0.0	chr4	84966681	84966703	(105247852)	+	(CTGA)n	Simple_repeat	1	23	(0)	2911911
18	26.4	0.0	7.9	chr4	84966704	84966736	(105247819)	+	(TCC)n	Simple_repeat	44	89	(0)	2911910
19	13.0	2.2	4.3	chr4	84966775	84966782	(105247773)	+	(CCTT)n	Simple_repeat	1	46	(0)	2911912
13	12.6	5.4	2.6	chr4	84966783	84966819	(105247736)	+	(CCTTT)n	Simple_repeat	1	39	(0)	2911913
13	29.0	1.5	4.3	chr4	84966951	84967018	(105247537)	+	(CTCCT)n	Simple_repeat	1	69	(0)	2911914
2249	12.5	1.6	0.0	chr4	86875903	86876199	(103338356)	+	AluSz6	SINE/Alu	2	303	(9)	2914508
263	29.3	0.0	6.2	chr4	87054806	87054885	(103159670)	+	MER102b	DNA/hAT-Charlie	1	75	(266)	2914845
1064	21.9	1.0	1.0	chr4	87055001	87055192	(103159363)	C	AluJr	SINE/Alu	(35)	277	86	2914846
10268	11.5	5.1	3.0	chr4	88119344	88120888	(102093667)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2916581
1153	8.4	4.6	0.0	chr4	89285194	89285360	(100929195)	+	L1PA6	LINE/L1	5980	6154	(0)	2918418
2767	13.2	13.2	7.2	chr4	89285361	89285520	(100929035)	+	LTR8A	LTR/ERV1	583	727	(0)	2918417
357	29.0	7.4	2.7	chr4	89285604	89285823	(100928732)	C	Tigger20a	DNA/TcMar-Tigger	(741)	232	2	2918419
587	31.9	8.8	1.5	chr4	89717281	89717672	(100496883)	+	MamGypsy2-I	LTR/Gypsy	106	528	(3638)	2919018
9411	14.2	3.9	0.4	chr4	92070902	92072425	(98142130)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	2	2921850
2030	16.4	5.2	0.3	chr4	92072427	92072788	(98141767)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2921850
2535	18.4	1.0	5.2	chr4	92072799	92073303	(98141252)	+	MSTA-int	LTR/ERVL-MaLR	1148	1631	(0)	2921849
7256	11.8	0.3	0.0	chr4	92253176	92254186	(97960369)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	567	2922045
2534	8.1	0.0	0.0	chr4	94715459	94715767	(95498788)	C	AluY	SINE/Alu	(2)	309	1	2925436
530	30.2	10.7	2.2	chr4	94715795	94716024	(95498531)	+	MIRb	SINE/MIR	3	254	(14)	2925437
29	0.0	0.0	0.0	chr4	98261351	98261378	(91953177)	+	(CCCGC)n	Simple_repeat	1	28	(0)	2929922
925	25.8	15.3	2.1	chr4	98605806	98606225	(91608330)	C	Helitron3Na_Mam	RC/Helitron	(1)	485	1	2930388
4043	12.3	1.4	9.3	chr4	99023794	99023951	(91190604)	C	LTR8	LTR/ERV1	(0)	691	537	2931144
3479	8.7	0.9	0.0	chr4	99023952	99024410	(91190145)	+	LTR2	LTR/ERV1	1	463	(0)	2931145
22638	12.5	1.4	2.5	chr4	99242230	99248672	(90965883)	C	L1PA7	LINE/L1	(6)	6463	5	2931430
15	8.8	0.0	0.0	chr4	99620008	99620031	(90594524)	+	(CAA)n	Simple_repeat	1	24	(0)	2931908
1929	22.9	12.0	0.0	chr4	99739233	99739708	(90474847)	C	MLT1F	LTR/ERVL-MaLR	(3)	545	5	2932045
2435	24.5	11.6	3.1	chr4	100162152	100162899	(90051656)	C	LTR8B	LTR/ERV1	(7)	813	1	2932705
19	21.8	3.0	2.9	chr4	100190506	100190572	(90023983)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2932749
1548	21.0	3.3	9.2	chr4	103358312	103358892	(86855663)	C	L1MB8	LINE/L1	(1269)	4877	4490	2936942
259	27.8	6.2	2.2	chr4	103358956	103359047	(86855508)	+	L1ME4b	LINE/L1	722	817	(75)	2936943
1821	15.8	14.2	1.9	chr4	103359052	103359419	(86855136)	+	MSTA	LTR/ERVL-MaLR	6	426	(2)	2936944
10477	14.4	1.1	0.1	chr4	103359422	103361036	(86853519)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2936944
204	10.6	0.0	0.7	chr4	104085200	104085504	(86129051)	+	(GAAGAA)n	Simple_repeat	1	305	(0)	2937796
1055	20.0	2.1	0.8	chr4	104085507	104085743	(86128812)	C	L1MD	LINE/L1	(2407)	5588	5349	2937797
625	22.5	22.9	6.2	chr4	104085744	104086176	(86128379)	C	Zaphod2	DNA/hAT-Tip100	(930)	2594	2089	2937792
1948	13.3	9.0	1.1	chr4	108776941	108777226	(81437329)	+	AluSz	SINE/Alu	2	312	(0)	2944057
615	27.0	8.5	5.8	chr4	108777227	108777301	(81437254)	+	MIR	SINE/MIR	147	213	(49)	2944056
4549	14.0	10.8	0.5	chr4	108777302	108778036	(81436519)	C	LTR8B	LTR/ERV1	(0)	820	1	2944058
18	12.5	0.0	2.7	chr4	110945910	110945946	(79268609)	+	(TTAT)n	Simple_repeat	1	37	(0)	2947299
16	28.8	2.2	4.3	chr4	112515257	112515347	(77699208)	+	(GCCCCCC)n	Simple_repeat	1	93	(0)	2949284
5692	18.4	5.7	0.9	chr4	117203957	117206636	(73007919)	+	L1PA16	LINE/L1	3085	6157	(9)	2955393
19	20.8	0.0	0.0	chr4	118888870	118888913	(71325642)	+	(GGC)n	Simple_repeat	1	44	(0)	2957660
16	9.6	0.0	0.0	chr4	119587222	119587244	(70627311)	+	(T)n	Simple_repeat	1	23	(0)	2958668
989	11.2	0.0	0.0	chr4	119587245	119587369	(70627186)	C	AluSx	SINE/Alu	(54)	258	134	2958669
181	39.5	5.3	3.6	chr4	119728589	119728756	(70485799)	C	L2	LINE/L2	(614)	2805	2635	2958901
2188	19.7	5.4	5.8	chr4	119728806	119729498	(70485057)	C	LTR8B	LTR/ERV1	(0)	820	1	2958902
17967	2.8	0.1	0.1	chr4	120645592	120648485	(69566070)	C	L1PA2	LINE/L1	(3127)	3019	125	2960063
1342	27.9	8.3	4.4	chr4	120648495	120649109	(69565446)	C	ERV3-16A3_I-int	LTR/ERVL	(1183)	4043	3403	2960062
14	13.1	11.5	1.7	chr4	121823742	121823793	(68390762)	+	(CAGCC)n	Simple_repeat	1	58	(0)	2961635
3092	16.5	7.7	1.8	chr4	122834616	122835298	(67379257)	+	LTR8A	LTR/ERV1	1	727	(0)	2963101
183	38.4	4.6	3.3	chr4	122835500	122835650	(67378905)	+	L2c	LINE/L2	2436	2588	(831)	2963102
16	0.0	4.3	0.0	chr4	123505553	123505575	(66708980)	+	(TGA)n	Simple_repeat	1	24	(0)	2964102
20	0.0	0.0	0.0	chr4	123505599	123505620	(66708935)	+	(A)n	Simple_repeat	1	22	(0)	2964103
17	25.9	0.0	1.9	chr4	123505639	123505690	(66708865)	+	(CGC)n	Simple_repeat	1	52	(0)	2964104
1877	21.1	4.3	2.5	chr4	123882145	123882576	(66331979)	+	MLT1D	LTR/ERVL-MaLR	66	505	(0)	2964610
533	28.5	11.8	4.4	chr4	123882585	123882859	(66331696)	C	LTR102_Mam	LTR/ERVL	(328)	523	226	2964609
10854	13.0	1.4	0.3	chr4	124960680	124962281	(65252274)	C	THE1D-int	LTR/ERVL-MaLR	(11)	1620	1	2965976
7987	12.6	1.9	1.2	chr4	127586993	127588195	(62626360)	+	L1PA15-16	LINE/L1	1340	2562	(4291)	2969268
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
24	26.3	0.0	1.4	chr4	128062002	128062071	(62152484)	+	(GCC)n	Simple_repeat	1	70	(0)	2970078
18	23.8	2.6	5.1	chr4	128287653	128287728	(61926827)	+	(CGC)n	Simple_repeat	1	78	(0)	2970493
12	22.8	1.5	7.6	chr4	128287796	128287809	(61926746)	+	(CCCGCC)n	Simple_repeat	1	24	(42)	2970494
12	8.4	0.0	6.9	chr4	128287810	128287838	(61926717)	+	(CCTCC)n	Simple_repeat	1	29	(0)	2970495
12	22.8	1.5	7.6	chr4	128287839	128287860	(61926695)	+	(CCCGCC)n	Simple_repeat	25	66	(0)	2970494
16	5.3	0.0	0.0	chr4	128553281	128553300	(61661255)	+	(AC)n	Simple_repeat	1	20	(0)	2970886
471	26.3	3.5	0.7	chr4	129614817	129614954	(60599601)	+	LTR33	LTR/ERVL	366	507	(8)	2972391
263	36.2	0.0	0.9	chr4	129615070	129615175	(60599380)	+	MamGypsy2-I	LTR/Gypsy	3988	4092	(74)	2972392
2978	22.5	9.2	1.8	chr4	132225885	132226643	(57987912)	+	LTR8B	LTR/ERV1	1	820	(0)	2975610
815	34.8	0.4	2.5	chr4	132226644	132226731	(57987824)	+	LTR16A	LTR/ERVL	259	347	(104)	2975609
3926	18.5	3.4	5.6	chr4	132226733	132227302	(57987253)	C	MER54B	LTR/ERVL	(0)	793	241	2975611
12	4.5	4.0	3.9	chr4	133149334	133149358	(57065197)	+	(AGGA)n	Simple_repeat	1	26	(0)	2976650
5860	9.8	1.9	1.1	chr4	134237752	134238986	(55975569)	C	L1PB1	LINE/L1	(361)	5790	4553	2977863
3688	12.2	3.4	0.7	chr4	134238988	134239590	(55974965)	+	L1PB1	LINE/L1	3933	4552	(1594)	2977863
1739	26.7	5.2	7.2	chr4	134852955	134853636	(55360919)	+	LTR8	LTR/ERV1	16	683	(8)	2978599
569	21.1	2.4	4.2	chr4	134853682	134853849	(55360706)	C	L1MA9	LINE/L1	(38)	6274	6110	2978600
2381	19.3	9.3	0.4	chr4	138816961	138817459	(51397096)	+	MLT1F	LTR/ERVL-MaLR	1	548	(0)	2983396
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
3370	17.1	0.7	1.7	chr4	139433793	139434318	(50780237)	C	L1M1	LINE/L1	(7027)	538	16	2984627
2292	22.4	10.2	9.6	chr4	139499132	139499838	(50714717)	+	LTR8B	LTR/ERV1	1	812	(8)	2984749
1046	11.3	7.9	0.0	chr4	139499849	139499999	(50714556)	+	MER39B	LTR/ERV1	318	481	(172)	2984750
12	7.9	7.4	0.0	chr4	140151677	140151703	(50062852)	+	G-rich	Low_complexity	1	29	(0)	2985798
12	23.4	0.0	4.5	chr4	140151741	140151784	(50062771)	+	A-rich	Low_complexity	1	44	(0)	2985799
3085	16.7	6.5	7.6	chr4	143245240	143245938	(46968617)	+	LTR8	LTR/ERV1	1	691	(0)	2990003
513	28.1	7.6	8.5	chr4	143245939	143246412	(46968143)	C	HAL1ME	LINE/L1	(159)	2306	1834	2990002
193	24.6	10.9	5.8	chr4	146660564	146660701	(43553854)	C	L2c	LINE/L2	(59)	3328	3183	2994625
355	32.7	8.9	1.8	chr4	147927475	147927692	(42286863)	C	MIRc	SINE/MIR	(23)	245	11	2996474
633	26.7	10.9	9.6	chr4	148544195	148544675	(41669880)	C	MLT1H	LTR/ERVL-MaLR	(4)	545	58	2997266
10337	11.5	6.9	0.2	chr4	150026323	150027841	(40186714)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	2999166
7488	17.7	11.6	4.6	chr4	152539540	152541503	(37673052)	C	MER52D	LTR/ERV1	(0)	2123	6	3003145
42	0.0	0.0	0.0	chr4	154417159	154417204	(35797351)	+	(GT)n	Simple_repeat	1	46	(0)	3005998
56	0.0	0.0	0.0	chr4	154417205	154417252	(35797303)	+	(GA)n	Simple_repeat	1	48	(0)	3005999
494	30.8	16.1	2.6	chr4	154549154	154549944	(35664611)	C	L2a	LINE/L2	(1)	3425	2498	3006193
4689	10.3	13.4	0.0	chr4	155439743	155440457	(34774098)	+	LTR12	LTR/ERV1	1	826	(0)	3007429
2765	13.2	6.0	4.1	chr4	158298568	158299055	(31915500)	+	LTR22C0	LTR/ERVK	1	498	(4)	3011191
2176	12.4	0.0	1.6	chr4	158299058	158299372	(31915183)	+	AluSq2	SINE/Alu	4	313	(0)	3011193
13	28.0	0.0	0.0	chr4	159103096	159103138	(31111417)	+	(GCAGGA)n	Simple_repeat	1	43	(0)	3012414
414	30.4	5.1	0.7	chr4	163183486	163183634	(27030921)	+	LTR78	LTR/ERV1	1149	1304	(0)	3017690
2477	15.7	0.5	2.1	chr4	169033628	169034053	(21180502)	C	MER61C	LTR/ERV1	(13)	415	13	3025684
529	13.1	4.8	0.0	chr4	169034055	169034153	(21180402)	+	L1MB3	LINE/L1	6080	6183	(0)	3025685
284	34.9	5.2	0.0	chr4	169311575	169311703	(20902852)	C	L2b	LINE/L2	(11)	3364	3229	3026148
213	36.7	3.7	3.7	chr4	169757323	169757486	(20457069)	+	L2c	LINE/L2	3147	3310	(77)	3026792
394	27.9	9.5	5.5	chr4	170227845	170228294	(19986261)	C	MLT1H1	LTR/ERVL-MaLR	(39)	510	1	3027491
3616	17.8	9.4	0.5	chr4	171639844	171640588	(18573967)	+	LTR8B	LTR/ERV1	3	820	(0)	3029236
2169	25.9	2.9	4.6	chr4	175343798	175344294	(14870261)	+	LTR8B	LTR/ERV1	326	812	(8)	3034072
359	29.5	11.9	6.5	chr4	175344306	175344462	(14870093)	+	L2a	LINE/L2	3119	3281	(145)	3034066
5196	9.7	3.5	0.8	chr4	177407933	177408691	(12805864)	C	LTR17	LTR/ERV1	(0)	780	1	3036882
2488	5.3	3.5	0.7	chr4	177928450	177928751	(12285804)	+	AluY	SINE/Alu	1	311	(0)	3037594
17	5.0	0.0	0.0	chr4	177928836	177928856	(12285699)	+	(A)n	Simple_repeat	1	21	(0)	3037595
2083	18.1	1.5	1.8	chr4	178570403	178570813	(11643742)	+	MER83B-int	LTR/ERV1	4525	4859	(21)	3038378
2113	15.2	1.1	1.9	chr4	178570831	178571206	(11643349)	+	MER83C	LTR/ERV1	1	373	(0)	3038378
3013	19.9	5.5	4.3	chr4	179429179	179429894	(10784661)	C	LTR8A	LTR/ERV1	(2)	725	1	3039496
19	8.5	0.0	8.9	chr4	182449092	182449136	(7765419)	+	(GCG)n	Simple_repeat	1	45	(0)	3043420
28	10.0	0.0	0.0	chr4	182449187	182449230	(7765325)	+	(GCG)n	Simple_repeat	1	44	(0)	3043420
3055	11.9	5.3	0.2	chr4	184911542	184911989	(5302566)	C	HERVK14-int	LTR/ERVK	(3921)	2175	1704	3047371
5224	9.0	0.3	0.1	chr4	184912028	184912720	(5301835)	C	HERVK14-int	LTR/ERVK	(5402)	694	1	3047371
592	26.7	5.2	2.4	chr4	185795049	185795217	(4419338)	+	MER45A	DNA/hAT-Tip100	4	177	(1)	3048756
437	32.1	14.1	1.7	chr4	185859359	185859773	(4354782)	+	L2c	LINE/L2	2910	3384	(3)	3048835
2462	16.2	2.8	1.4	chr4	186027098	186027296	(4187259)	+	MSTB	LTR/ERVL-MaLR	1	202	(224)	3049094
3595	17.2	12.7	0.1	chr4	186027297	186028013	(4186542)	C	LTR8B	LTR/ERV1	(0)	820	1	3049095
3817	15.5	2.1	0.2	chr4	186452111	186452722	(3761833)	C	LTR8B	LTR/ERV1	(0)	820	197	3049672
1468	23.7	5.2	8.2	chr4	186459590	186460126	(3754429)	+	MER34C2	LTR/ERV1	36	555	(0)	3049685
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
3652	15.4	3.4	0.1	chr5	697716	698424	(180839835)	+	L1M2	LINE/L1	3514	4246	(1897)	3055624
240	13.5	0.0	0.0	chr5	1571119	1571155	(179967104)	C	MER1B	DNA/hAT-Charlie	(210)	129	93	3056370
709	20.3	2.5	0.0	chr5	1571245	1571402	(179966857)	C	MER1B	DNA/hAT-Charlie	(360)	169	1	3056371
17	20.7	3.5	10.0	chr5	10306359	10306474	(171231785)	+	GA-rich	Low_complexity	1	120	(0)	3066657
646	19.1	8.4	0.7	chr5	16906359	16906500	(164631759)	C	MER20	DNA/hAT-Charlie	(63)	156	3	3075747
737	19.9	2.7	0.0	chr5	17097439	17097584	(164440675)	+	MER3	DNA/hAT-Charlie	17	166	(43)	3076202
19618	12.5	2.4	4.4	chr5	17949116	17952526	(163585733)	C	L1PB1	LINE/L1	(1)	3726	296	3077432
3496	18.7	11.5	0.3	chr5	18154240	18154964	(163383295)	C	LTR8B	LTR/ERV1	(0)	820	4	3077720
446	31.8	6.1	3.2	chr5	18517660	18517981	(163020278)	C	ERV3-16A3_I-int	LTR/ERVL	(3276)	2481	2000	3078167
10848	10.4	0.3	6.6	chr5	18814471	18816158	(162722101)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3078543
2057	17.3	0.8	1.9	chr5	18816159	18816524	(162721735)	C	THE1B	LTR/ERVL-MaLR	(0)	364	3	3078543
4639	15.0	3.8	0.1	chr5	28301336	28302125	(153236134)	+	LTR8B	LTR/ERV1	1	820	(0)	3090974
402	31.0	3.8	13.1	chr5	31280274	31280563	(150257696)	C	MIRc	SINE/MIR	(0)	268	7	3094692
21	32.9	1.6	4.0	chr5	31280752	31280779	(150257480)	+	GA-rich	Low_complexity	1	60	(65)	3094693
349	21.5	5.6	8.8	chr5	32735415	32735562	(148802697)	C	L1ME4a	LINE/L1	(0)	6124	5982	3097380
4687	14.2	6.2	1.2	chr5	33476703	33477479	(148060780)	+	LTR8B	LTR/ERV1	2	820	(0)	3098404
2969	14.5	3.3	4.2	chr5	33477480	33477611	(148060648)	C	MER34D	LTR/ERV1	(136)	443	323	3098403
2417	9.6	0.3	0.0	chr5	33477612	33477913	(148060346)	C	AluSg	SINE/Alu	(7)	303	1	3098405
658	32.4	5.3	5.3	chr5	34986816	34987101	(146551158)	C	L2	LINE/L2	(980)	2439	2150	3100743
2989	17.5	10.6	1.2	chr5	34987102	34987759	(146550500)	C	LTR8A	LTR/ERV1	(0)	727	1	3100744
797	28.6	8.6	2.6	chr5	35404941	35405291	(146132968)	+	LTR16C	LTR/ERVL	112	485	(4)	3101341
343	34.8	6.5	6.1	chr5	35405316	35405756	(146132503)	C	L1M6	LINE/L1	(4558)	1938	1496	3101342
1514	20.7	10.4	6.8	chr5	35438195	35438676	(146099583)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	3	3101396
3387	18.8	11.8	0.3	chr5	35438718	35439442	(146098817)	C	LTR8B	LTR/ERV1	(0)	820	1	3101397
803	31.5	13.3	3.1	chr5	36777800	36778222	(144760037)	+	LTR67B	LTR/ERVL	52	524	(96)	3103329
2277	7.3	1.4	0.3	chr5	37378645	37378931	(144159328)	+	AluSx1	SINE/Alu	20	309	(3)	3104395
1136	9.2	9.4	0.0	chr5	37378943	37379106	(144159153)	+	AluSx	SINE/Alu	121	301	(11)	3104396
822	25.0	11.6	1.5	chr5	38002348	38002619	(143535640)	C	MER121	DNA/hAT?	(28)	373	71	3105393
474	30.3	9.3	0.0	chr5	39804923	39805087	(141733172)	+	MIRb	SINE/MIR	53	234	(34)	3108110
1651	26.3	2.4	3.3	chr5	39805462	39805921	(141732338)	+	LTR16B2	LTR/ERVL	3	458	(4)	3108111
2749	2.9	0.0	0.3	chr5	43018574	43018883	(138519376)	+	AluY	SINE/Alu	1	309	(2)	3112413
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
14	11.2	3.5	0.0	chr5	43121157	43121185	(138417074)	+	(GGGGC)n	Simple_repeat	1	30	(0)	3112576
11438	10.3	1.1	0.1	chr5	43696003	43697563	(137840696)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	3113464
14	16.4	2.9	0.0	chr5	53109766	53109799	(128428460)	+	(AGGCGC)n	Simple_repeat	1	35	(0)	3119839
2801	14.7	5.5	4.5	chr5	54968502	54969078	(126569181)	+	MER34C_	LTR/ERV1	1	583	(2)	3122527
518	27.6	3.6	0.5	chr5	54969082	54969299	(126568960)	+	MARNA	DNA/TcMar-Mariner	236	460	(126)	3122528
615	29.7	5.3	7.1	chr5	56345808	56346075	(125192184)	+	MER102b	DNA/hAT-Charlie	2	264	(77)	3124904
1529	22.6	11.7	7.3	chr5	56346078	56346135	(125192124)	+	LTR29	LTR/ERV1	1	58	(564)	3124905
5044	14.0	6.8	0.0	chr5	56346136	56346899	(125191360)	C	LTR8B	LTR/ERV1	(0)	820	1	3124906
282	32.7	11.6	1.6	chr5	57042599	57042915	(124495344)	+	L2	LINE/L2	2488	2840	(579)	3125962
475	19.8	4.3	0.0	chr5	57327779	57327889	(124210370)	C	MER5A1	DNA/hAT-Charlie	(50)	116	1	3126611
3860	17.0	10.5	0.3	chr5	57327956	57328691	(124209568)	C	LTR8B	LTR/ERV1	(0)	820	1	3126612
9368	11.4	0.9	0.0	chr5	58200522	58201875	(123336384)	+	Tigger1	DNA/TcMar-Tigger	1047	2412	(6)	3127790
1220	25.6	3.5	4.0	chr5	58347645	58348043	(123190216)	C	MLT2C1	LTR/ERVL	(0)	397	1	3128001
44	0.0	0.0	0.0	chr5	59128016	59128053	(122410206)	+	(GT)n	Simple_repeat	1	38	(0)	3129094
342	27.7	7.0	0.6	chr5	59317408	59317567	(122220692)	C	MamGypsy2-LTR	LTR/Gypsy	(7)	176	6	3129346
2519	21.2	0.6	2.7	chr5	59713595	59714524	(121823735)	+	HERVL18-int	LTR/ERVL	9	1614	(4433)	3129865
1394	13.1	23.2	0.0	chr5	59714558	59714827	(121823432)	+	HERVL18-int	LTR/ERVL	2120	2452	(3595)	3129865
5451	16.1	0.2	2.2	chr5	59714827	59715703	(121822556)	+	HERVL18-int	LTR/ERVL	2720	3579	(2468)	3129865
15	14.4	3.1	0.0	chr5	59893925	59893956	(121644303)	+	(TCCT)n	Simple_repeat	1	33	(0)	3130140
11	24.9	0.0	0.0	chr5	59893997	59894030	(121644229)	+	(GCAGCA)n	Simple_repeat	1	34	(0)	3130141
803	24.5	6.8	6.1	chr5	60870726	60871134	(120667125)	+	L1MEj	LINE/L1	914	1325	(835)	3131457
18	20.4	5.6	2.7	chr5	65925578	65925648	(115612611)	+	(CTGCCCC)n	Simple_repeat	1	75	(0)	3138687
20	20.9	5.3	2.5	chr5	65925814	65925888	(115612371)	+	(CCCT)n	Simple_repeat	1	79	(0)	3138688
3286	16.9	14.9	0.7	chr5	67194026	67194728	(114343531)	+	LTR8B	LTR/ERV1	1	820	(0)	3140483
2073	14.4	0.0	5.8	chr5	67194798	67195179	(114343080)	+	MLT1B	LTR/ERVL-MaLR	1	360	(30)	3140484
339	30.1	3.4	0.7	chr5	67204193	67204336	(114333923)	C	MIR	SINE/MIR	(95)	167	20	3140503
2047	13.0	0.3	3.8	chr5	69034675	69034989	(112503270)	+	AluSx1	SINE/Alu	2	305	(7)	3143108
1495	23.7	7.9	10.7	chr5	69034990	69035003	(112503256)	+	L1ME4b	LINE/L1	398	403	(489)	3143106
995	22.1	4.9	1.4	chr5	69035004	69035219	(112503040)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	3143109
1495	23.7	7.9	10.7	chr5	69035220	69035654	(112502605)	+	L1ME4b	LINE/L1	404	862	(30)	3143106
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
1969	8.7	4.4	3.1	chr5	69559317	69559605	(111978654)	C	AluSx1	SINE/Alu	(19)	293	1	3144320
1313	25.5	11.8	0.2	chr5	69559606	69559828	(111978431)	+	L2a	LINE/L2	3169	3420	(6)	3144319
15	12.4	2.6	5.0	chr5	71455695	71455733	(110082526)	+	(GCG)n	Simple_repeat	1	40	(0)	3147474
7959	13.6	1.7	0.4	chr5	71849666	71850917	(109687342)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	363	3148155
2068	19.4	3.7	3.7	chr5	72667926	72668385	(108869874)	+	LTR40b	LTR/ERVL	3	462	(0)	3149333
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
13	17.6	2.4	4.7	chr5	73626535	73626576	(107911683)	+	(GGC)n	Simple_repeat	1	43	(0)	3150827
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
926	25.0	10.3	4.6	chr5	76284538	76284864	(105253395)	C	LTR33	LTR/ERVL	(167)	348	1	3154758
1288	16.1	16.4	3.4	chr5	77195035	77195387	(104342872)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3156356
4452	16.0	3.0	8.1	chr5	77195388	77195535	(104342724)	C	L1MB5	LINE/L1	(613)	5561	5425	3156355
2548	14.6	2.1	2.8	chr5	77195536	77195972	(104342287)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	1	3156357
17	15.8	2.2	4.3	chr5	77492451	77492496	(104045763)	+	(GCG)n	Simple_repeat	1	47	(0)	3156732
12	18.9	0.0	7.1	chr5	79236030	79236071	(102302188)	+	(CGC)n	Simple_repeat	1	42	(0)	3159397
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
2550	6.3	0.3	0.0	chr5	79611683	79611982	(101926277)	C	AluSg	SINE/Alu	(9)	301	1	3160093
31	21.7	0.0	0.0	chr5	79612336	79612399	(101925860)	+	G-rich	Low_complexity	1	64	(0)	3160094
187	36.5	4.9	6.0	chr5	80082604	80082769	(101455490)	C	MIRc	SINE/MIR	(13)	255	92	3160812
803	18.1	0.0	0.8	chr5	80411960	80412092	(101126167)	C	FLAM_A	SINE/Alu	(10)	132	1	3161541
5869	7.2	1.3	0.6	chr5	80548943	80550140	(100988119)	C	L1PB1	LINE/L1	(376)	5775	4565	3161781
17560	11.6	3.5	2.5	chr5	81291160	81291851	(100246408)	+	L1PA16	LINE/L1	3294	3977	(2169)	3162936
1855	18.5	9.8	9.9	chr5	81291852	81292474	(100245785)	C	LTR77	LTR/ERV1	(0)	622	1	3162939
206	23.8	13.1	3.6	chr5	81301405	81301487	(100236772)	+	L2b	LINE/L2	3239	3330	(45)	3162953
19	16.2	1.5	7.6	chr5	83474233	83474297	(98063962)	+	G-rich	Low_complexity	1	66	(0)	3166016
13	16.2	0.0	0.0	chr5	84383011	84383038	(97155221)	+	(ATGG)n	Simple_repeat	1	28	(0)	3167184
2188	11.7	0.0	0.3	chr5	84811184	84811465	(96726794)	C	AluSz	SINE/Alu	(30)	282	2	3167746
609	38.3	4.2	3.7	chr5	84811466	84811721	(96726538)	+	L2	LINE/L2	2804	3069	(350)	3167743
2216	12.9	1.4	1.1	chr5	84811725	84812085	(96726174)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	3167747
9714	18.0	2.6	2.2	chr5	90568038	90568921	(90969338)	C	L1MB7	LINE/L1	(2920)	3724	2838	3174971
1471	25.6	4.3	2.6	chr5	90568922	90569310	(90968949)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3174975
180	35.2	15.4	1.1	chr5	90912043	90912131	(90626128)	+	MIRb	SINE/MIR	165	268	(0)	3175374
2600	13.7	0.2	7.4	chr5	90912382	90912870	(90625389)	C	L1PA16	LINE/L1	(9)	6157	5704	3175375
5809	19.0	2.8	4.9	chr5	92511555	92512926	(89025333)	+	L1MB8	LINE/L1	4004	5349	(797)	3177551
3643	18.3	2.0	10.3	chr5	92512927	92513507	(89024752)	C	LTR8B	LTR/ERV1	(0)	820	321	3177552
290	32.2	3.3	2.5	chr5	93553756	93553876	(87984383)	C	MamRTE1	LINE/RTE-BovB	(3532)	280	159	3178806
262	35.3	3.8	1.0	chr5	93553884	93553986	(87984273)	C	MamSINE1	SINE/tRNA-RTE	(183)	107	2	3178807
711	26.8	1.9	3.2	chr5	94741805	94742020	(86796239)	+	MIRb	SINE/MIR	56	268	(0)	3180225
284	33.8	8.7	6.2	chr5	98777487	98777631	(82760628)	+	MIRb	SINE/MIR	2	150	(118)	3185545
872	12.8	10.2	25.7	chr5	98978553	98978790	(82559469)	C	AluJo	SINE/Alu	(8)	304	119	3185854
1863	16.0	0.0	3.7	chr5	98978791	98978948	(82559311)	C	AluJb	SINE/Alu	(23)	289	134	3185855
54	3.8	0.0	0.0	chr5	98978949	98979003	(82559256)	+	(TA)n	Simple_repeat	1	55	(0)	3185856
1863	16.0	0.0	3.7	chr5	98979004	98979144	(82559115)	C	AluJb	SINE/Alu	(179)	133	1	3185855
7728	7.0	0.5	0.4	chr5	100774645	100775650	(80762609)	+	LTR13	LTR/ERVK	1	1007	(0)	3188177
3044	12.6	4.5	1.2	chr5	103722197	103722574	(77815685)	C	THE1D-int	LTR/ERVL-MaLR	(1205)	375	1	3191823
2237	11.3	6.8	1.4	chr5	103722575	103722934	(77815325)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3191823
9500	13.6	3.5	1.6	chr5	104094881	104096387	(77441872)	C	THE1D-int	LTR/ERVL-MaLR	(27)	1553	3	3192298
1737	15.7	9.7	0.9	chr5	104096390	104096736	(77441523)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3192298
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
3996	22.1	7.8	2.5	chr5	108372208	108373632	(73164627)	+	L1M4	LINE/L1	1704	3162	(3705)	3197536
1946	16.3	0.0	1.0	chr5	108373633	108373926	(73164333)	+	AluJb	SINE/Alu	1	291	(21)	3197539
258	32.3	10.6	1.8	chr5	108727411	108727623	(72810636)	+	L2b	LINE/L2	3047	3287	(100)	3198048
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
18	27.9	0.0	2.9	chr5	111757614	111757681	(69780578)	+	(CGCACCC)n	Simple_repeat	1	68	(0)	3201827
15	24.9	0.0	0.0	chr5	111758220	111758253	(69780006)	+	(CA)n	Simple_repeat	1	34	(0)	3201828
313	28.0	2.1	0.0	chr5	112990000	112990092	(68548167)	+	MIR	SINE/MIR	119	213	(49)	3203676
500	29.6	0.0	0.0	chr5	112990211	112990342	(68547917)	+	MIR	SINE/MIR	19	150	(112)	3203677
36	21.7	0.0	1.2	chr5	113488327	113488409	(68049850)	+	(CGC)n	Simple_repeat	1	83	(0)	3204364
714	32.7	6.6	4.9	chr5	113635127	113635557	(67902702)	+	L2c	LINE/L2	2391	2829	(590)	3204558
323	35.5	6.5	2.8	chr5	113635709	113635885	(67902374)	+	L2c	LINE/L2	3089	3272	(115)	3204558
264	25.4	7.6	6.2	chr5	115064824	115064894	(66473365)	+	MIRb	SINE/MIR	120	190	(78)	3206257
2390	11.3	0.0	0.0	chr5	115064895	115065187	(66473072)	+	AluSc	SINE/Alu	1	293	(16)	3206258
12	20.8	0.0	2.9	chr5	115169937	115169971	(66368288)	+	G-rich	Low_complexity	1	35	(0)	3206387
13	20.3	7.8	0.0	chr5	115170211	115170261	(66367998)	+	G-rich	Low_complexity	1	55	(0)	3206388
2295	12.0	0.3	1.0	chr5	122839489	122839787	(58698472)	C	AluSx	SINE/Alu	(15)	297	1	3216516
1265	20.4	12.6	5.0	chr5	122839798	122840026	(58698233)	C	L1M6	LINE/L1	(878)	1883	1648	3216513
2233	13.3	0.0	1.3	chr5	122840027	122840327	(58697932)	+	AluSz6	SINE/Alu	1	297	(15)	3216517
9308	9.5	0.7	0.7	chr5	123567760	123569046	(57969213)	C	HSMAR1	DNA/TcMar-Mariner	(0)	1287	1	3217576
2405	27.6	8.4	2.7	chr5	123648258	123648741	(57889518)	+	L1MEb	LINE/L1	28	575	(5519)	3217684
3034	0.3	0.0	0.7	chr5	124555877	124556182	(56982077)	+	AluYa5	SINE/Alu	1	304	(7)	3218783
1927	28.9	7.0	5.8	chr5	124556203	124556790	(56981469)	+	L1ME3D	LINE/L1	791	1387	(5889)	3218784
513	7.1	0.0	0.0	chr5	125327407	125327476	(56210783)	C	Alu	SINE/Alu	(6)	305	236	3219907
379	31.0	3.5	13.8	chr5	126787013	126787360	(54750899)	C	L2c	LINE/L2	(0)	3387	3077	3221981
47	27.1	4.0	2.2	chr5	126787402	126787546	(54750713)	+	(AT)n	Simple_repeat	1	149	(0)	3221982
280	33.3	2.0	10.0	chr5	126875783	126876002	(54662257)	C	MIRb	SINE/MIR	(37)	231	30	3222125
2494	19.4	3.9	1.7	chr5	127967044	127967568	(53570691)	+	LTR8A	LTR/ERV1	191	727	(0)	3223544
359	23.7	6.0	9.3	chr5	127967573	127967744	(53570515)	+	L1M2	LINE/L1	3096	3261	(2882)	3223545
15	10.8	3.3	0.0	chr5	131263905	131263934	(50274325)	+	(GGCGGG)n	Simple_repeat	1	31	(0)	3227655
14	27.8	1.4	4.2	chr5	131264260	131264329	(50273930)	+	G-rich	Low_complexity	1	71	(0)	3227656
435	25.7	3.3	1.3	chr5	131398292	131398489	(50139770)	+	L1MEh	LINE/L1	1422	1691	(774)	3227891
299	26.8	15.8	2.0	chr5	132189997	132190240	(49348019)	+	L1ME3B	LINE/L1	1022	1305	(5798)	3229022
498	20.9	9.2	5.5	chr5	132190262	132190427	(49347832)	+	LTR50	LTR/ERVL	1	174	(357)	3229023
954	21.3	8.7	0.2	chr5	132190538	132190828	(49347431)	+	L1ME3B	LINE/L1	4936	5263	(883)	3229022
16	13.7	4.8	2.3	chr5	134114635	134114676	(47423583)	+	(CCCGC)n	Simple_repeat	1	44	(0)	3231963
13	11.5	5.4	8.5	chr5	134114711	134114766	(47423493)	+	(CCCGCAG)n	Simple_repeat	1	59	(0)	3231964
17	20.9	2.3	0.0	chr5	134114924	134114967	(47423292)	+	(CGG)n	Simple_repeat	1	45	(0)	3231965
806	32.0	12.6	0.5	chr5	135460286	135460677	(46077582)	C	MLT1J	LTR/ERVL-MaLR	(49)	463	18	3234322
2375	10.9	0.0	0.3	chr5	138226366	138226676	(43311583)	+	AluSq2	SINE/Alu	2	311	(2)	3238397
3735	15.8	8.3	11.6	chr5	138226677	138226888	(43311371)	+	LTR8B	LTR/ERV1	666	820	(0)	3238396
458	31.1	8.2	2.9	chr5	138227112	138227353	(43310906)	+	MIR	SINE/MIR	5	260	(2)	3238398
8245	5.6	0.7	0.4	chr5	138410509	138411512	(43126747)	C	LTR13	LTR/ERVK	(0)	1007	1	3238820
1772	14.2	1.9	6.2	chr5	138463077	138463400	(43074859)	+	AluJo	SINE/Alu	1	310	(2)	3238913
419	31.1	0.4	15.6	chr5	138463401	138463467	(43074792)	C	MIR	SINE/MIR	(162)	100	35	3238910
15	7.8	3.7	0.0	chr5	138753605	138753631	(42784628)	+	(GCGG)n	Simple_repeat	1	28	(0)	3239540
46	6.0	0.0	0.0	chr5	140648008	140648060	(40890199)	+	(GT)n	Simple_repeat	1	53	(0)	3242991
371	30.6	5.8	7.7	chr5	140648156	140648448	(40889811)	+	L2c	LINE/L2	3035	3356	(19)	3242992
362	26.4	9.5	0.5	chr5	141752082	141752235	(39786024)	+	L1ME4a	LINE/L1	6018	6119	(5)	3244537
303	25.5	10.2	0.9	chr5	141752242	141752348	(39785911)	+	MIRb	SINE/MIR	143	260	(8)	3244538
208	27.1	1.7	0.0	chr5	141752413	141752471	(39785788)	+	L2c	LINE/L2	3324	3383	(4)	3244539
296	17.8	1.4	4.0	chr5	143260641	143260716	(38277543)	+	L1M2	LINE/L1	5755	5828	(472)	3247413
42	0.0	0.0	0.0	chr5	143260717	143260752	(38277507)	+	(AC)n	Simple_repeat	1	36	(0)	3247414
231	20.3	2.6	7.5	chr5	143260753	143260764	(38277495)	+	L1P4	LINE/L1	5829	5839	(329)	3247415
1431	14.2	0.0	0.5	chr5	143260757	143260976	(38277283)	C	L1M2	LINE/L1	(537)	5775	5557	3247410
16	0.0	0.0	0.0	chr5	143445987	143446003	(38092256)	+	(T)n	Simple_repeat	1	17	(0)	3247674
946	29.2	10.6	2.4	chr5	148733931	148734479	(32803780)	+	L2a	LINE/L2	2818	3426	(0)	3256342
1793	19.7	0.0	0.7	chr5	149051454	149051753	(32486506)	C	AluJb	SINE/Alu	(14)	298	1	3256935
14	20.1	2.4	0.0	chr5	149051754	149051768	(32486491)	+	(ATTC)n	Simple_repeat	3	17	(0)	3256936
313	20.3	6.3	0.0	chr5	149067093	149067166	(32471093)	C	MER102c	DNA/hAT-Charlie	(0)	331	258	3256965
5127	15.6	6.0	0.0	chr5	149067182	149067952	(32470307)	C	LTR8B	LTR/ERV1	(0)	820	1	3256966
452	28.4	9.8	0.7	chr5	151619653	151619801	(29918458)	+	MIR3	SINE/MIR	21	184	(24)	3262230
278	29.6	0.0	2.4	chr5	154609974	154610036	(26928223)	+	MIRc	SINE/MIR	49	111	(157)	3267597
3807	14.1	14.8	0.3	chr5	157293676	157294374	(24243885)	C	LTR8B	LTR/ERV1	(0)	820	3	3272451
258	22.2	11.1	5.9	chr5	157934205	157934357	(23603902)	+	L1MC5a	LINE/L1	52	213	(2564)	3273642
14	9.6	0.0	0.0	chr5	157934374	157934396	(23603863)	+	(CTC)n	Simple_repeat	1	23	(0)	3273643
323	24.0	2.6	0.0	chr5	157934453	157934527	(23603732)	+	L1ME3G	LINE/L1	293	369	(555)	3273644
3033	19.8	3.6	7.0	chr5	157934528	157935243	(23603016)	C	LTR8	LTR/ERV1	(0)	691	1	3273645
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
14	0.0	0.0	0.0	chr5	160370447	160370464	(21167795)	+	(TCC)n	Simple_repeat	1	18	(0)	3278046
3888	14.8	5.2	3.0	chr5	163330144	163330503	(18207756)	C	LTR8A	LTR/ERV1	(0)	727	373	3282364
9749	12.2	4.7	3.6	chr5	163919541	163921102	(17617157)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3283283
10186	11.4	4.2	0.1	chr5	165318444	165319957	(16218302)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3285171
2290	14.7	0.8	0.8	chr5	165319958	165320321	(16217938)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3285171
490	28.8	4.7	1.2	chr5	169468257	169468421	(12069838)	C	MIRc	SINE/MIR	(16)	252	82	3291858
3482	19.5	5.7	1.6	chr5	170844186	170845023	(10693236)	C	L1MB8	LINE/L1	(0)	6178	5304	3294397
11521	8.8	1.9	0.1	chr5	170979816	170981366	(10556893)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3294581
10194	11.6	3.8	4.3	chr5	172031171	172032758	(9505501)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3296526
282	29.1	18.7	1.5	chr5	172646618	172646886	(8891373)	C	L2c	LINE/L2	(72)	3315	2990	3297908
472	28.5	7.0	0.5	chr5	172647336	172647522	(8890737)	C	MIRb	SINE/MIR	(42)	226	27	3297909
13	23.8	1.5	7.2	chr5	172770604	172770671	(8767588)	+	(GCGCGCC)n	Simple_repeat	1	69	(0)	3298155
324	32.1	9.7	0.0	chr5	172939117	172939247	(8599012)	C	L2b	LINE/L2	(1)	3374	3230	3298564
5602	16.9	0.5	0.2	chr5	174462164	174463108	(7075151)	C	L1MC1	LINE/L1	(0)	6333	5386	3301550
4659	15.7	3.7	3.7	chr5	174754939	174755546	(6782713)	C	L1MB5	LINE/L1	(351)	5823	5231	3302163
201	20.8	3.6	0.0	chr5	177425868	177425920	(4112339)	+	MIR1_Amn	SINE/MIR	96	150	(80)	3307398
11	11.1	6.9	0.0	chr5	177425969	177425997	(4112262)	+	(GGCCGA)n	Simple_repeat	1	31	(0)	3307399
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
196	24.2	4.6	3.1	chr5	178777331	178777394	(2760865)	C	MER131	DNA?	(60)	155	91	3309792
2004	11.9	1.1	1.1	chr5	178895422	178895706	(2642553)	C	AluSq2	SINE/Alu	(16)	297	13	3310020
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
2169	30.1	9.3	6.1	chr5	179360891	179361191	(2177068)	C	MLT1B-int	LTR/ERVL-MaLR	(979)	430	136	3310707
249	24.4	0.0	10.3	chr5	179361253	179361339	(2176920)	C	MLT1B	LTR/ERVL-MaLR	(13)	547	462	3310707
2543	3.6	0.0	0.7	chr5	179632025	179632333	(1905926)	+	AluYa5	SINE/Alu	1	307	(4)	3311229
13	7.5	0.0	8.8	chr5	179733063	179733096	(1805163)	+	(CCGGCC)n	Simple_repeat	1	34	(0)	3311472
2492	18.4	3.8	0.4	chr5	180727492	180728275	(809984)	+	L1M4	LINE/L1	4766	5579	(601)	3313157
333	18.2	2.5	3.8	chr5	180728292	180728371	(809888)	C	FordPrefect_a	DNA/hAT-Tip100	(422)	86	8	3313156
404	33.3	6.9	5.3	chr5	180799008	180799362	(738897)	+	L2	LINE/L2	2710	3070	(349)	3313261
688	0.0	0.0	0.0	chr5	181169610	181169682	(368577)	+	tRNA-Val-GTY	tRNA	1	73	(3)	3313774
667	0.0	0.0	0.0	chr5	181221979	181222051	(316208)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	3313889
660	0.0	0.0	0.0	chr5	181222394	181222467	(315792)	C	tRNA-Val-GTG	tRNA	(2)	74	1	3313890
473	24.0	7.8	10.7	chr6	240733	240901	(170565078)	C	ORSL	DNA/hAT-Tip100	(27)	248	80	3314575
2630	7.5	0.3	0.3	chr6	240902	241207	(170564772)	C	AluSp	SINE/Alu	(7)	306	1	3314576
4134	18.6	3.2	1.4	chr6	779385	780444	(170025535)	+	L1MB8	LINE/L1	5085	6157	(21)	3315233
11	26.4	5.6	0.0	chr6	1624316	1624369	(169181610)	+	(GCCTCCC)n	Simple_repeat	1	57	(0)	3316395
3783	17.8	3.0	1.2	chr6	3117494	3118217	(167687762)	C	L1MB3	LINE/L1	(5)	6178	5442	3318429
15	23.0	2.9	8.6	chr6	3118584	3118685	(167687294)	+	(GGCGG)n	Simple_repeat	1	105	(0)	3318430
697	18.5	0.7	0.7	chr6	3209274	3209409	(167596570)	+	MER5A1	DNA/hAT-Charlie	27	162	(4)	3318577
5424	12.6	1.9	2.3	chr6	3232312	3233315	(167572664)	C	L1PA17	LINE/L1	(0)	6166	5177	3318611
3770	25.1	3.9	3.0	chr6	3646547	3646995	(167158984)	C	MER45B	DNA/hAT-Tip100	(559)	481	2	3319221
1786	13.3	0.0	7.2	chr6	5820054	5820198	(164985781)	C	AluJo	SINE/Alu	(170)	142	1	3322613
2338	9.7	0.0	0.3	chr6	6993275	6993583	(163812396)	+	AluSc8	SINE/Alu	2	309	(2)	3324345
389	30.8	11.9	0.5	chr6	6993711	6993896	(163812083)	+	MLT1N2	LTR/ERVL-MaLR	353	562	(0)	3324346
41	2.5	0.0	0.0	chr6	6993917	6993956	(163812023)	+	(TG)n	Simple_repeat	1	40	(0)	3324347
265	27.0	4.3	1.5	chr6	8373300	8373425	(162432554)	C	MER63B	DNA/hAT-Blackjack	(68)	142	9	3326637
2742	19.3	15.3	6.1	chr6	8373610	8374347	(162431632)	C	LTR8B	LTR/ERV1	(2)	818	1	3326639
9250	12.7	6.0	4.4	chr6	9260695	9262249	(161543730)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3327847
232	33.7	2.7	4.2	chr6	9293219	9293407	(161512572)	+	MER103C	DNA/hAT-Charlie	112	297	(0)	3327891
18	17.5	0.0	0.0	chr6	12012603	12012634	(158793345)	+	G-rich	Low_complexity	1	32	(0)	3332075
16	27.8	1.9	0.0	chr6	12012653	12012677	(158793302)	+	(GCGT)n	Simple_repeat	1	53	(0)	3332076
22	3.9	0.0	0.0	chr6	12012678	12012704	(158793275)	+	(GT)n	Simple_repeat	1	27	(0)	3332077
12	15.7	5.3	2.5	chr6	12530313	12530350	(158275629)	+	GA-rich	Low_complexity	1	40	(0)	3332828
4976	14.4	2.7	0.5	chr6	14271878	14272673	(156533306)	+	LTR8B	LTR/ERV1	3	816	(4)	3335730
430	35.2	14.2	3.6	chr6	14272674	14272797	(156533182)	+	MamRTE1	LINE/RTE-BovB	2694	2816	(996)	3335729
847	26.2	8.9	4.8	chr6	14397491	14397843	(156408136)	C	LTR88b	LTR/Gypsy?	(468)	369	1	3335925
1091	35.3	6.5	3.3	chr6	17011856	17012616	(153793363)	+	L2b	LINE/L2	2137	2923	(496)	3340412
495	17.5	4.7	13.0	chr6	17012679	17012869	(153793110)	+	LTR81A	LTR/Gypsy	10	188	(1205)	3340413
1483	22.5	2.7	3.7	chr6	17179053	17179430	(153626549)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3340675
14	7.2	0.0	5.9	chr6	17179579	17179605	(153626374)	+	(GGGTG)n	Simple_repeat	1	25	(0)	3340676
4398	15.6	5.4	1.1	chr6	17179606	17180390	(153625589)	C	LTR8B	LTR/ERV1	(0)	820	1	3340677
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
297	28.8	5.3	8.6	chr6	18829971	18830145	(151975834)	+	MLT1M	LTR/ERVL-MaLR	123	291	(381)	3343642
366	13.3	0.0	1.6	chr6	18830365	18830425	(151975554)	+	MLT1M	LTR/ERVL-MaLR	611	670	(2)	3343643
1555	15.6	1.1	1.8	chr6	26188288	26188562	(144617417)	+	AluSz6	SINE/Alu	1	273	(39)	3354799
21	18.4	0.0	2.0	chr6	27251567	27251617	(143554362)	+	G-rich	Low_complexity	1	51	(0)	3356580
11	26.7	4.5	2.9	chr6	27296365	27296430	(143509549)	+	GA-rich	Low_complexity	1	69	(0)	3356669
2695	15.7	5.9	10.1	chr6	27313089	27313957	(143492022)	+	L1MC2	LINE/L1	5163	5984	(360)	3356699
755	37.1	4.3	5.5	chr6	27365655	27366347	(143439632)	C	L2b	LINE/L2	(169)	3206	2517	3356771
590	0.0	0.0	22.9	chr6	27605637	27605745	(143200234)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357208
2482	5.7	0.0	3.1	chr6	27655782	27656098	(143149881)	+	AluY	SINE/Alu	2	308	(3)	3357307
2359	16.9	1.9	5.1	chr6	27656099	27656164	(143149815)	+	L1MB3	LINE/L1	5676	5733	(447)	3357303
571	23.7	0.7	1.4	chr6	27656165	27656305	(143149674)	+	AluJb	SINE/Alu	1	140	(172)	3357308
228	15.4	2.5	0.0	chr6	27656306	27656344	(143149635)	+	AluJb	SINE/Alu	241	280	(22)	3357308
5473	16.2	1.5	0.8	chr6	28354792	28355649	(142450330)	C	HERVL18-int	LTR/ERVL	(2466)	3581	2718	3358499
1485	13.7	21.4	1.0	chr6	28355624	28355921	(142450058)	C	HERVL18-int	LTR/ERVL	(3570)	2477	2119	3358499
1171	17.5	17.7	1.4	chr6	28355921	28356282	(142449697)	C	HERVL18-int	LTR/ERVL	(4237)	1810	1390	3358499
12	14.3	3.0	2.9	chr6	29633516	29633548	(141172431)	+	(AGAGGC)n	Simple_repeat	1	34	(0)	3360374
59	0.0	1.9	0.0	chr6	29633967	29634020	(141171959)	+	(GT)n	Simple_repeat	1	55	(0)	3360375
12	16.1	2.6	5.0	chr6	31442131	31442169	(139363810)	+	(GCCCCT)n	Simple_repeat	1	40	(0)	3363325
12	16.8	3.7	7.1	chr6	31806831	31806884	(138999095)	+	(AGCGCG)n	Simple_repeat	1	56	(0)	3363932
24	23.9	3.8	1.2	chr6	31897640	31897719	(138908260)	+	(GCC)n	Simple_repeat	1	83	(0)	3364122
2183	13.8	0.0	0.0	chr6	34429761	34430058	(136375921)	C	AluSx	SINE/Alu	(14)	298	1	3368375
235	10.5	0.0	0.0	chr6	34430074	34430111	(136375868)	+	L1MEd	LINE/L1	1341	1378	(5708)	3368373
348	29.8	5.3	0.0	chr6	34430162	34430285	(136375694)	+	L2b	LINE/L2	2759	2889	(530)	3368376
490	18.7	0.0	0.9	chr6	34725916	34726023	(136079956)	+	L1M5	LINE/L1	5075	5181	(965)	3369032
2942	16.4	14.2	1.6	chr6	34726027	34726603	(136079376)	C	LTR8B	LTR/ERV1	(0)	820	159	3369033
2145	12.9	0.0	1.0	chr6	35449180	35449481	(135356498)	+	AluSx	SINE/Alu	12	310	(2)	3370407
458	20.0	8.2	6.5	chr6	35449548	35449702	(135356277)	C	MER91B	DNA/hAT-Tip100	(32)	158	1	3370408
12	14.4	0.0	0.0	chr6	36196746	36196769	(134609210)	+	(GGC)n	Simple_repeat	1	24	(0)	3371983
16	34.1	1.2	1.2	chr6	36196789	36196870	(134609109)	+	G-rich	Low_complexity	1	83	(0)	3371984
12	22.0	5.4	3.4	chr6	36196877	36196932	(134609047)	+	(CCGCG)n	Simple_repeat	1	59	(0)	3371985
2038	6.5	1.2	0.4	chr6	36593295	36593541	(134212438)	C	AluSx1	SINE/Alu	(63)	249	1	3372884
4449	13.2	12.4	0.3	chr6	38432264	38432983	(132372996)	+	LTR8B	LTR/ERV1	1	820	(0)	3376385
1432	23.2	1.0	8.6	chr6	38432984	38433050	(132372929)	+	MSTD	LTR/ERVL-MaLR	330	396	(0)	3376384
999	14.9	9.6	0.0	chr6	39843543	39843703	(130962276)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3378644
472	30.4	9.6	3.3	chr6	39843933	39844146	(130961833)	+	MIRb	SINE/MIR	17	245	(23)	3378645
15	12.7	0.0	5.3	chr6	41073547	41073584	(129732395)	+	(CTCCCCG)n	Simple_repeat	1	38	(0)	3380582
13	15.9	0.0	9.8	chr6	41073761	41073811	(129732168)	+	(CGCC)n	Simple_repeat	1	51	(0)	3380583
13	20.6	2.6	0.0	chr6	42454061	42454099	(128351880)	+	(TGTCCTC)n	Simple_repeat	1	40	(0)	3383280
2095	11.9	3.0	0.3	chr6	43115654	43115947	(127690032)	+	AluSx1	SINE/Alu	1	302	(10)	3384726
15	18.1	3.1	0.0	chr6	43247644	43247675	(127558304)	+	(GT)n	Simple_repeat	1	33	(0)	3385001
12	18.8	2.6	2.6	chr6	43575960	43575997	(127229982)	+	(GCGGCGG)n	Simple_repeat	1	39	(0)	3385604
19	16.6	4.3	0.0	chr6	43576024	43576070	(127229909)	+	(GCCCGC)n	Simple_repeat	1	49	(0)	3385605
210	28.6	2.0	12.1	chr6	43859039	43859191	(126946788)	+	MIR1_Amn	SINE/MIR	37	177	(31)	3386141
213	31.1	7.5	0.0	chr6	43859596	43859694	(126946285)	+	L2c	LINE/L2	3238	3347	(28)	3386142
275	28.3	4.8	4.8	chr6	46628469	46628572	(124177407)	C	Tigger16b	DNA/TcMar-Tigger	(35)	301	212	3390469
630	29.6	8.4	3.2	chr6	46628885	46629132	(124176847)	C	MIRb	SINE/MIR	(3)	265	4	3390470
1175	27.1	5.3	2.0	chr6	47415887	47416215	(123389764)	+	LTR16C	LTR/ERVL	73	418	(71)	3391720
4360	15.0	7.6	0.0	chr6	47416216	47416973	(123389006)	C	LTR8B	LTR/ERV1	(0)	820	1	3391721
4593	14.6	7.3	0.1	chr6	47426700	47427460	(123378519)	+	LTR8B	LTR/ERV1	1	820	(0)	3391736
874	22.2	5.8	5.2	chr6	47427461	47427493	(123378486)	+	LTR49-int	LTR/ERV1	1180	1207	(7837)	3391735
1976	14.9	7.7	7.9	chr6	47427494	47427922	(123378057)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3391737
825	26.5	1.4	1.8	chr6	49623562	49623780	(121182199)	+	MER20	DNA/hAT-Charlie	1	218	(1)	3394680
264	20.6	2.7	5.2	chr6	51450521	51450597	(119355382)	C	MER4-int	LTR/ERV1	(5436)	1162	1088	3397103
1730	21.2	3.5	1.6	chr6	51944433	51944820	(118861159)	+	LTR8B	LTR/ERV1	425	820	(0)	3397750
204	34.4	5.0	1.0	chr6	51944959	51945055	(118860924)	C	MamRTE1	LINE/RTE-BovB	(667)	3145	3045	3397751
13	16.2	0.0	5.3	chr6	53348582	53348619	(117457360)	+	(CGCCCG)n	Simple_repeat	1	38	(0)	3400036
12	9.7	8.6	2.6	chr6	53348638	53348672	(117457307)	+	(CGGAG)n	Simple_repeat	1	38	(0)	3400037
14	23.1	2.1	2.1	chr6	53348858	53348904	(117457075)	+	(GGC)n	Simple_repeat	1	48	(0)	3400038
438	23.7	5.6	8.2	chr6	53573893	53574039	(117231940)	C	MIRb	SINE/MIR	(103)	165	23	3400370
675	21.7	13.6	1.5	chr6	53579709	53579914	(117226065)	C	L1ME1	LINE/L1	(596)	5568	5334	3400385
602	23.1	1.4	0.0	chr6	53579911	53580053	(117225926)	+	L1MD	LINE/L1	2715	2859	(3287)	3400388
1703	23.5	11.4	5.9	chr6	53580056	53580616	(117225363)	C	L1MEh	LINE/L1	(780)	1455	874	3400384
1901	15.6	13.1	0.8	chr6	68418838	68419212	(102386767)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3416650
10000	13.4	2.6	0.2	chr6	68419214	68420803	(102385176)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	3416650
310	25.2	3.7	8.8	chr6	71127196	71127365	(99678614)	C	L1ME3G	LINE/L1	(352)	572	412	3420151
1454	28.2	6.7	2.0	chr6	71127366	71127803	(99678176)	+	LTR16B1	LTR/ERVL	21	480	(0)	3420152
9608	12.7	5.7	3.9	chr6	71624616	71626213	(99179766)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3420859
11104	10.9	3.0	0.1	chr6	75058355	75059930	(95746049)	C	THE1D-int	LTR/ERVL-MaLR	(7)	1624	1	3425744
1909	13.0	6.8	2.5	chr6	75059931	75060294	(95745685)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3425744
26	20.2	0.0	0.0	chr6	75284721	75284777	(95521202)	+	(CGCCGC)n	Simple_repeat	1	57	(0)	3425987
993	14.3	4.1	0.0	chr6	81776821	81776960	(89029019)	+	AluSg4	SINE/Alu	139	284	(26)	3434227
16	13.2	0.0	0.0	chr6	81777011	81777035	(89028944)	+	(TG)n	Simple_repeat	1	25	(0)	3434228
2178	17.1	2.2	2.2	chr6	81777046	81777072	(89028907)	C	MSTB	LTR/ERVL-MaLR	(13)	413	389	3434229
2018	14.6	1.9	4.3	chr6	81777073	81777445	(89028534)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3434230
2323	17.1	2.2	2.2	chr6	81777446	81777830	(89028149)	C	MSTB	LTR/ERVL-MaLR	(38)	388	1	3434229
9246	10.2	4.4	14.4	chr6	83031309	83032657	(87773322)	+	THE1B-int	LTR/ERVL-MaLR	362	1580	(0)	3435958
389	24.5	9.7	0.0	chr6	84469328	84469429	(86336550)	+	MIR3	SINE/MIR	69	181	(27)	3437881
22	23.9	1.6	1.6	chr6	85922936	85922998	(84882981)	+	(CCT)n	Simple_repeat	1	64	(0)	3439730
1185	26.4	11.7	11.6	chr6	85923006	85923772	(84882207)	+	LTR41	LTR/ERVL	1	768	(0)	3439731
1300	26.1	14.2	4.3	chr6	89573155	89573822	(81232157)	C	L1MEd	LINE/L1	(297)	2210	1385	3445005
229	30.8	3.0	0.0	chr6	89574079	89574143	(81231836)	+	MIRc	SINE/MIR	17	83	(185)	3445012
921	23.8	0.9	2.7	chr6	89574163	89574382	(81231597)	C	MER20	DNA/hAT-Charlie	(0)	219	4	3445013
32	3.0	0.0	0.0	chr6	90296785	90296818	(80509161)	+	(GCT)n	Simple_repeat	1	34	(0)	3446171
23	21.4	3.8	2.2	chr6	90297035	90297105	(80508874)	+	G-rich	Low_complexity	1	72	(0)	3446172
9837	11.6	5.2	0.8	chr6	90914837	90916345	(79889634)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3447015
10452	13.9	0.3	0.9	chr6	98142409	98144046	(72661933)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	4	3455895
1055	27.2	15.5	6.0	chr6	105004336	105005445	(65800534)	C	HAL1	LINE/L1	(64)	2443	1223	3464787
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
2311	20.6	8.7	1.5	chr6	105774674	105775758	(65030221)	+	L1ME1	LINE/L1	4642	5837	(342)	3465899
4698	12.9	9.4	1.6	chr6	106852003	106852569	(63953410)	+	LTR8B	LTR/ERV1	189	820	(0)	3467627
11131	10.8	2.9	1.9	chr6	107447355	107448735	(63357244)	C	THE1D-int	LTR/ERVL-MaLR	(168)	1412	4	3468873
3697	17.2	9.7	1.4	chr6	108317171	108317901	(62488078)	C	LTR8B	LTR/ERV1	(22)	798	1	3470403
606	24.7	6.2	1.7	chr6	109138443	109138665	(61667314)	C	L1ME4c	LINE/L1	(394)	5730	5529	3471718
578	16.3	3.0	5.8	chr6	109138782	109138885	(61667094)	C	MER44B	DNA/TcMar-Tigger	(0)	550	450	3471719
200	25.4	3.5	0.0	chr6	109383253	109383307	(61422672)	C	MIR3	SINE/MIR	(55)	153	97	3472068
12	31.3	2.6	3.8	chr6	111872300	111872376	(58933603)	+	G-rich	Low_complexity	1	79	(0)	3476291
212	29.8	7.3	6.6	chr6	112088066	112088187	(58717792)	C	L2c	LINE/L2	(48)	3339	3217	3476621
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
23	12.6	0.0	0.0	chr6	118893825	118893864	(51912115)	+	(A)n	Simple_repeat	1	40	(0)	3485823
24	17.9	5.4	2.6	chr6	118893924	118893997	(51911982)	+	(CCG)n	Simple_repeat	1	78	(0)	3485824
12467	11.1	1.4	0.0	chr6	119082302	119083909	(51722070)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	3486089
2226	10.7	6.6	5.8	chr6	119083911	119084288	(51721691)	C	MSTA	LTR/ERVL-MaLR	(0)	381	1	3486089
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
660	30.4	6.3	3.2	chr6	119273415	119273815	(51532164)	C	L1ME4a	LINE/L1	(267)	5857	5444	3486390
1518	25.5	6.4	5.0	chr6	122189805	122190263	(48615716)	C	LTR40a	LTR/ERVL	(53)	466	1	3490089
3545	10.8	10.8	0.5	chr6	122438376	122438981	(48366998)	+	L1PA14	LINE/L1	1595	2270	(4419)	3490412
4102	17.8	8.9	1.3	chr6	122438982	122439818	(48366161)	+	MSTA-int	LTR/ERVL-MaLR	745	1651	(0)	3490411
8281	11.9	1.7	0.3	chr6	122562020	122564041	(48241938)	C	L1PBa1	LINE/L1	(4058)	2808	689	3490569
14	18.5	0.0	0.0	chr6	122996244	122996274	(47809705)	+	(CAG)n	Simple_repeat	1	31	(0)	3491135
1889	19.0	0.0	0.3	chr6	123767488	123767797	(47038182)	+	AluJb	SINE/Alu	3	311	(1)	3492141
15	26.9	2.6	5.0	chr6	123803350	123803427	(47002552)	+	(CGC)n	Simple_repeat	1	80	(0)	3492190
18	18.7	0.0	5.6	chr6	123803630	123803683	(47002296)	+	(CCCCG)n	Simple_repeat	1	54	(0)	3492191
29	13.2	0.0	0.0	chr6	125099515	125099564	(45706415)	+	(GGGCGG)n	Simple_repeat	1	50	(0)	3493842
32	30.2	2.1	2.7	chr6	127118719	127118862	(43687117)	+	(CCG)n	Simple_repeat	1	147	(0)	3496468
1523	18.0	7.2	1.7	chr6	127374096	127374598	(43431381)	+	LTR8A	LTR/ERV1	155	727	(0)	3496797
339	21.0	4.7	0.0	chr6	127374599	127374679	(43431300)	C	L1M4a2	LINE/L1	(669)	1987	1903	3496800
2315	9.5	0.0	0.0	chr6	127374706	127374989	(43430990)	+	AluSx3	SINE/Alu	1	284	(27)	3496801
15	8.8	0.0	0.0	chr6	127515788	127515811	(43290168)	+	(GCC)n	Simple_repeat	1	24	(0)	3496998
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
502	24.6	2.4	9.1	chr6	127923988	127924211	(42881768)	+	MLT1G1	LTR/ERVL-MaLR	209	504	(65)	3497510
995	35.5	7.4	2.3	chr6	127924297	127925092	(42880887)	+	L2a	LINE/L2	2581	3425	(1)	3497511
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
18	24.2	3.3	5.3	chr6	131135644	131135734	(39670245)	+	(CCGCCT)n	Simple_repeat	1	94	(0)	3501898
1928	16.8	7.9	0.3	chr6	131141122	131141509	(39664470)	+	MSTB	LTR/ERVL-MaLR	1	420	(6)	3501910
8809	16.6	2.5	5.6	chr6	131141516	131143221	(39662758)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	3501910
320	28.5	14.3	9.5	chr6	131459775	131459991	(39345988)	+	MIRc	SINE/MIR	32	251	(17)	3502375
53	0.0	0.0	0.0	chr6	131460317	131460361	(39345618)	+	(TC)n	Simple_repeat	1	45	(0)	3502376
15	12.0	3.7	0.0	chr6	138988291	138988317	(31817662)	+	GA-rich	Low_complexity	1	28	(0)	3513899
30	34.8	0.0	0.0	chr6	139373348	139373463	(31432516)	+	(GCC)n	Simple_repeat	1	116	(0)	3514554
462	6.3	0.0	0.0	chr6	141182675	141182737	(29623242)	+	HERV9NC-int	LTR/ERV1	5222	5284	(834)	3516949
4578	7.6	0.3	0.2	chr6	141182734	141183342	(29622637)	+	HERV9NC-int	LTR/ERV1	5509	6118	(0)	3516949
17	7.0	0.0	5.9	chr6	142146996	142147029	(28658950)	+	(AACAA)n	Simple_repeat	1	34	(0)	3518107
372	34.8	5.7	3.1	chr6	143213222	143213461	(27592518)	C	L2c	LINE/L2	(1)	3374	3150	3519541
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
411	24.4	9.2	0.0	chr6	144008774	144008892	(26797087)	C	MIRb	SINE/MIR	(21)	247	117	3520696
478	28.2	15.2	2.2	chr6	144008893	144009302	(26796677)	C	HAL1b	LINE/L1	(212)	2209	1737	3520697
17	15.8	5.9	1.9	chr6	144064364	144064414	(26741565)	+	(GCCCCCGC)n	Simple_repeat	1	54	(0)	3520784
365	32.0	6.9	6.6	chr6	144064755	144064897	(26741082)	+	MIR	SINE/MIR	14	163	(99)	3520785
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
3166	19.4	13.7	0.4	chr6	144865403	144866113	(25939866)	+	LTR8B	LTR/ERV1	1	820	(0)	3521978
722	31.7	5.8	3.4	chr6	144866114	144866395	(25939584)	C	MER110-int	LTR/ERV1	(4090)	557	266	3521973
14	5.0	0.0	0.0	chr6	147204595	147204615	(23601364)	+	(GCA)n	Simple_repeat	1	21	(0)	3525092
14	12.5	0.0	0.0	chr6	147204785	147204810	(23601169)	+	(AAT)n	Simple_repeat	1	26	(0)	3525093
15	13.2	2.9	2.8	chr6	147508440	147508474	(23297505)	+	(GCG)n	Simple_repeat	1	36	(0)	3525501
12	24.0	2.6	0.0	chr6	147508629	147508667	(23297312)	+	(GCG)n	Simple_repeat	1	40	(0)	3525502
3519	27.5	11.8	0.5	chr6	149551506	149552682	(21253297)	C	L1M2	LINE/L1	(5521)	1328	1	3528658
17	31.7	2.0	4.0	chr6	149749714	149749812	(21056167)	+	(GCGGCG)n	Simple_repeat	1	101	(0)	3529085
14	16.1	7.1	0.0	chr6	149863784	149863825	(20942154)	+	(CAGCTC)n	Simple_repeat	1	45	(0)	3529317
15	18.4	0.0	7.8	chr6	150143197	150143247	(20662732)	+	(CGG)n	Simple_repeat	1	51	(0)	3529746
14	28.5	2.0	0.0	chr6	150143349	150143399	(20662580)	+	(GCA)n	Simple_repeat	1	52	(0)	3529747
1436	23.9	3.5	0.8	chr6	150277636	150277993	(20527986)	+	Cheshire	DNA/hAT-Charlie	32	399	(2021)	3529957
417	16.4	21.2	5.0	chr6	151453152	151453292	(19352687)	+	MER96	DNA/hAT-Tip100	3	172	(3)	3532028
26	25.1	2.8	0.0	chr6	152636577	152636647	(18169332)	+	(CT)n	Simple_repeat	1	73	(0)	3533798
19	19.9	3.4	1.6	chr6	152637068	152637126	(18168853)	+	(CGCCCCG)n	Simple_repeat	1	61	(0)	3533799
251	35.6	2.2	1.5	chr6	153175761	153175894	(17630085)	C	MIRb	SINE/MIR	(114)	154	20	3534550
15	4.1	4.0	0.0	chr6	153176022	153176046	(17629933)	+	(GTTTT)n	Simple_repeat	1	26	(0)	3534551
2041	9.2	8.2	0.4	chr6	153490332	153490612	(17315367)	+	AluSc8	SINE/Alu	1	305	(6)	3534999
803	30.8	7.2	2.9	chr6	153490613	153490770	(17315209)	+	L1M5	LINE/L1	4080	4239	(1907)	3534998
2243	13.6	1.6	5.1	chr6	158464081	158464475	(12341504)	C	MER4D	LTR/ERV1	(1)	902	522	3542577
669	12.6	42.3	0.5	chr6	158464501	158464698	(12341281)	C	AluSx	SINE/Alu	(31)	281	1	3542578
2018	18.1	5.6	4.8	chr6	158840662	158841119	(11964860)	C	LTR8A	LTR/ERV1	(0)	727	266	3543215
268	36.8	14.3	1.9	chr6	159253062	159253548	(11552431)	+	MamRTE1	LINE/RTE-BovB	811	1368	(2444)	3543852
31	13.9	0.0	0.0	chr6	160218913	160218977	(10587002)	+	(CAG)n	Simple_repeat	1	65	(0)	3545197
4008	17.4	7.8	3.5	chr6	161006615	161007008	(9798971)	C	MER92-int	LTR/ERV1	(4554)	664	247	3546075
1008	22.0	11.8	0.7	chr6	161007241	161007519	(9798460)	C	MER92D	LTR/ERV1	(4)	316	3	3546075
188	29.1	12.4	4.5	chr6	163311941	163312073	(7493906)	C	LFSINE_Vert	SINE/tRNA	(174)	285	141	3549267
5983	12.9	0.7	0.5	chr6	163504999	163505875	(7300104)	+	THE1D-int	LTR/ERVL-MaLR	753	1631	(0)	3549553
14352	16.7	3.8	1.7	chr6	165068516	165070971	(5735008)	+	L1MC2	LINE/L1	3596	6098	(421)	3551501
10165	15.7	0.6	1.0	chr6	165258043	165259680	(5546299)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3551737
1834	14.0	11.4	10.0	chr6	165259681	165260101	(5545878)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3551737
322	32.7	3.3	7.2	chr6	165674100	165674320	(5131659)	+	MIR	SINE/MIR	32	243	(19)	3552237
1400	29.0	6.7	0.6	chr6	168293869	168294402	(2511577)	+	MER45B	DNA/hAT-Tip100	61	629	(411)	3555339
14	22.3	0.0	8.8	chr6	168319432	168319499	(2486480)	+	G-rich	Low_complexity	1	68	(0)	3555361
7302	17.4	2.5	0.2	chr6	169517962	169519300	(1286679)	C	MSTA-int	LTR/ERVL-MaLR	(281)	1370	1	3556540
2146	17.8	5.6	1.2	chr6	169519301	169519709	(1286270)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3556540
10578	12.4	5.7	0.3	chr6	170004121	170005661	(800318)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3557057
10361	12.0	2.9	3.8	chr6	170300469	170302063	(503916)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3557304
588	22.1	14.6	0.0	chr7	2080155	2080312	(157265661)	+	MER58A	DNA/hAT-Charlie	36	220	(4)	3560781
1637	23.2	13.2	3.1	chr7	4086278	4086833	(155259140)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	7	3564231
762	20.0	1.2	1.2	chr7	4086847	4087013	(155258960)	C	L1MC5a	LINE/L1	(2334)	443	277	3564223
690	29.6	8.0	0.0	chr7	4087144	4087430	(155258543)	C	L1MEd	LINE/L1	(1110)	5036	4725	3564232
309	38.5	0.0	0.0	chr7	4416582	4416711	(154929262)	C	L3	LINE/CR1	(4)	4095	3966	3564770
1187	27.5	6.7	1.2	chr7	4416797	4417286	(154928687)	+	L2	LINE/L2	1907	2425	(994)	3564771
1899	18.4	0.0	0.7	chr7	5558406	5558704	(153787269)	+	AluJr4	SINE/Alu	1	297	(15)	3567334
3316	15.7	5.2	9.3	chr7	6569316	6569860	(152776113)	C	LTR8	LTR/ERV1	(162)	529	3	3569706
3100	20.4	10.3	4.2	chr7	6569931	6570182	(152775791)	C	LTR8B	LTR/ERV1	(2)	818	569	3569709
2503	6.7	0.0	0.0	chr7	6570183	6570482	(152775491)	C	AluY	SINE/Alu	(11)	300	1	3569710
1826	17.2	1.4	7.0	chr7	6875625	6879552	(152466421)	+	SATR2	Satellite	1	3706	(47)	3570321
21087	12.4	1.6	0.9	chr7	7556349	7562119	(151783854)	+	L1PA13	LINE/L1	3	6778	(5)	3571251
3883	16.0	2.8	2.8	chr7	8319131	8319466	(151026507)	C	MER72B	LTR/ERV1	(8)	760	430	3572355
4861	12.8	7.0	0.1	chr7	8319467	8320230	(151025743)	C	LTR8B	LTR/ERV1	(0)	820	1	3572356
4056	15.5	1.8	4.0	chr7	9131028	9131820	(150214153)	C	L1MA7	LINE/L1	(185)	6106	5332	3573349
2895	21.1	6.6	0.4	chr7	9131826	9133012	(150212961)	+	L1PA8	LINE/L1	4892	6157	(15)	3573350
618	23.4	7.7	0.1	chr7	9657404	9657574	(149688399)	C	LTR41B	LTR/ERVL	(575)	193	1	3573990
404	26.4	5.5	1.9	chr7	9657575	9657732	(149688241)	+	L1ME3A	LINE/L1	4687	4850	(1296)	3573989
248	23.9	10.7	0.8	chr7	10156222	10156339	(149189634)	+	L1MEd	LINE/L1	1317	1447	(5639)	3574615
310	25.3	12.0	7.3	chr7	10156602	10156806	(149189167)	+	L1M2	LINE/L1	3085	3300	(2843)	3574618
1822	17.5	0.3	0.3	chr7	11183167	11183451	(148162522)	C	AluJr	SINE/Alu	(27)	285	1	3575890
2656	21.1	9.5	4.7	chr7	11183538	11184353	(148161620)	C	L1ME1	LINE/L1	(22)	6157	5298	3575891
3231	16.3	10.3	1.5	chr7	11413472	11414133	(147931840)	+	LTR8A	LTR/ERV1	1	727	(0)	3576170
3528	14.6	1.2	2.6	chr7	11414134	11414626	(147931347)	+	MER72	LTR/ERV1	232	722	(0)	3576169
28	12.4	0.0	0.0	chr7	11831828	11831880	(147514093)	+	(AGC)n	Simple_repeat	1	53	(0)	3576680
20	27.5	0.0	0.0	chr7	11832113	11832184	(147513789)	+	(GCC)n	Simple_repeat	1	72	(0)	3576681
17	14.4	0.0	0.0	chr7	12685622	12685652	(146660321)	+	(GGA)n	Simple_repeat	1	31	(0)	3577693
3299	31.5	5.1	2.4	chr7	14019524	14020629	(145325344)	+	L2	LINE/L2	1766	2914	(505)	3579496
319	32.7	12.5	2.9	chr7	17390756	17391064	(141954909)	+	LTR78	LTR/ERV1	744	1086	(218)	3583834
473	30.6	6.9	6.7	chr7	18123887	18124247	(141221726)	C	MLT1L	LTR/ERVL-MaLR	(224)	386	25	3584859
283	28.3	10.7	4.2	chr7	18124318	18124413	(141221560)	+	MIR3	SINE/MIR	58	160	(48)	3584860
333	28.8	0.0	0.0	chr7	18124429	18124508	(141221465)	C	L2a	LINE/L2	(1)	3425	3346	3584861
22	8.4	0.0	4.8	chr7	18124665	18124706	(141221267)	+	(TTTA)n	Simple_repeat	1	42	(0)	3584862
744	30.4	6.9	0.0	chr7	19414567	19414783	(139931190)	+	MER102b	DNA/hAT-Charlie	2	234	(107)	3586502
1423	17.6	7.5	21.2	chr7	19947961	19948459	(139397514)	+	MSTA	LTR/ERVL-MaLR	1	425	(3)	3587090
466	19.5	3.5	2.4	chr7	19948468	19948604	(139397369)	+	MSTA-int	LTR/ERVL-MaLR	2	136	(1235)	3587090
20	17.8	1.8	3.6	chr7	21427972	21428028	(137917945)	+	(CGCCC)n	Simple_repeat	1	56	(0)	3589265
16	22.8	6.6	0.0	chr7	21428284	21428344	(137917629)	+	(CTCC)n	Simple_repeat	1	65	(0)	3589266
14	17.6	0.0	2.9	chr7	22356971	22357004	(136988969)	+	(GCC)n	Simple_repeat	1	34	(0)	3590526
254	25.0	12.8	4.7	chr7	22452038	22452209	(136893764)	C	LTR50	LTR/ERVL	(39)	756	569	3590687
433	23.2	5.9	14.8	chr7	22452349	22452571	(136893402)	C	LTR50	LTR/ERVL	(593)	202	1	3590687
2020	12.5	1.0	0.7	chr7	23447353	23447649	(135898324)	+	AluSz6	SINE/Alu	11	308	(4)	3592363
1781	20.0	8.1	11.6	chr7	23447650	23447688	(135898285)	+	L1MC4	LINE/L1	7590	7625	(417)	3592360
1690	18.8	1.0	2.5	chr7	23447691	23448004	(135897969)	+	AluJr4	SINE/Alu	1	309	(3)	3592364
52	23.8	1.4	1.4	chr7	27199827	27199967	(132146006)	+	(GCC)n	Simple_repeat	1	143	(0)	3598103
20	19.6	3.3	1.6	chr7	27200141	27200200	(132145773)	+	G-rich	Low_complexity	1	62	(0)	3598104
445	28.6	4.0	5.4	chr7	27408774	27408976	(131936997)	C	MIRc	SINE/MIR	(1)	267	68	3598452
12	20.1	0.0	2.8	chr7	27409088	27409123	(131936850)	+	(AATAAT)n	Simple_repeat	1	36	(0)	3598453
850	25.9	12.2	7.0	chr7	30714972	30715096	(128630877)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	444	3603528
1653	16.8	24.3	1.1	chr7	30715097	30715476	(128630497)	C	LOR1a	LTR/ERV1	(0)	497	1	3603529
1855	17.7	2.9	5.6	chr7	33107772	33108161	(126237812)	C	MER57B2	LTR/ERV1	(17)	386	8	3607374
270	33.8	2.8	3.5	chr7	33879841	33879984	(125465989)	C	L2c	LINE/L2	(27)	3360	3218	3608535
825	27.1	3.2	1.6	chr7	33879993	33880265	(125465708)	+	MLT1H	LTR/ERVL-MaLR	4	323	(226)	3608536
1543	26.7	6.7	2.1	chr7	33880275	33880744	(125465229)	+	MER74B	LTR/ERVL	56	548	(74)	3608537
17	26.0	0.0	5.6	chr7	35037448	35037518	(124308455)	+	(GGCG)n	Simple_repeat	1	71	(0)	3610093
11	23.9	4.5	0.0	chr7	35801027	35801070	(123544903)	+	(GAGCGG)n	Simple_repeat	1	46	(0)	3611238
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
17	33.0	0.0	3.6	chr7	35801781	35801864	(123544109)	+	(GGC)n	Simple_repeat	1	84	(0)	3611240
489	25.4	14.5	1.1	chr7	36638084	36638262	(122707711)	C	MIRb	SINE/MIR	(20)	248	42	3612606
17	10.8	0.0	0.0	chr7	39271426	39271455	(120074518)	+	(GTTTT)n	Simple_repeat	1	30	(0)	3616296
17	0.0	0.0	0.0	chr7	39271495	39271513	(120074460)	+	(A)n	Simple_repeat	1	19	(0)	3616297
38	31.7	0.0	0.8	chr7	39950746	39950875	(119395098)	+	(GCC)n	Simple_repeat	1	130	(0)	3617487
13	18.3	2.6	2.5	chr7	39950917	39950955	(119395018)	+	(GGCGAGA)n	Simple_repeat	1	40	(0)	3617488
378	32.0	6.4	0.0	chr7	40536603	40536705	(118809268)	C	L2b	LINE/L2	(8)	3367	3258	3618606
1141	8.0	0.7	0.0	chr7	42857434	42857600	(116488373)	+	AluSx3	SINE/Alu	174	311	(0)	3621775
12296	14.8	2.3	9.3	chr7	43577035	43579639	(115766334)	C	Tigger1	DNA/TcMar-Tigger	(1)	2417	1	3622828
31	18.7	4.1	3.9	chr7	44847977	44848074	(114497899)	+	(CGC)n	Simple_repeat	1	102	(0)	3625016
3447	15.1	10.6	0.3	chr7	45504157	45504742	(113841231)	+	LTR8B	LTR/ERV1	168	820	(0)	3626013
5350	12.7	4.2	0.1	chr7	45559230	45560016	(113785957)	+	LTR8B	LTR/ERV1	1	820	(0)	3626090
547	30.6	7.7	0.0	chr7	46421183	46421375	(112924598)	C	MIR	SINE/MIR	(17)	245	37	3627218
4101	14.1	13.7	0.0	chr7	48074154	48074861	(111271112)	+	LTR8B	LTR/ERV1	1	820	(0)	3629447
1634	21.5	4.3	9.5	chr7	48074862	48075174	(111270799)	C	MER31B	LTR/ERV1	(103)	363	55	3629446
1466	22.5	4.3	4.1	chr7	52320265	52320681	(107025292)	+	LTR8B	LTR/ERV1	403	820	(0)	3634754
1534	15.8	6.0	1.5	chr7	52320758	52321279	(107024694)	+	LTR49	LTR/ERV1	1	621	(1)	3634755
11055	11.5	0.5	0.1	chr7	52984668	52986241	(106359732)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3635625
12	27.4	1.8	3.5	chr7	54933238	54933293	(104412680)	+	G-rich	Low_complexity	1	57	(0)	3637989
12	12.8	5.6	2.6	chr7	54933402	54933437	(104412536)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	3637990
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
17047	15.6	1.9	0.9	chr7	65403922	65406831	(93939142)	+	HUERS-P3-int	LTR/ERV1	1050	3990	(4929)	3647795
3186	13.5	0.6	0.0	chr7	66245161	66245642	(93100331)	C	MER31A	LTR/ERV1	(0)	485	1	3649608
849	12.9	2.4	0.0	chr7	66655540	66655663	(92690310)	C	AluJr	SINE/Alu	(179)	133	7	3650506
468	25.4	0.8	4.5	chr7	66741687	66741818	(92604155)	+	SVA_A	Retroposon/SVA	194	320	(1067)	3650718
788	14.4	0.8	0.8	chr7	66741701	66741825	(92604148)	C	AluJr	SINE/Alu	(181)	131	7	3650719
2150	8.2	0.3	4.9	chr7	66741856	66742160	(92603813)	+	AluY	SINE/Alu	1	291	(20)	3650720
3257	16.9	10.3	1.1	chr7	67583369	67584025	(91761948)	C	LTR8A	LTR/ERV1	(0)	727	3	3652573
31	2.2	4.0	3.9	chr7	69598310	69598359	(89747614)	+	(CGAG)n	Simple_repeat	1	52	(0)	3657061
6550	18.0	12.8	4.6	chr7	69911106	69912500	(89433473)	C	MER52A	LTR/ERV1	(197)	1558	1	3657558
15	18.5	0.0	2.6	chr7	71787928	71787966	(87558007)	+	GA-rich	Low_complexity	1	39	(0)	3660926
1868	13.9	3.0	1.4	chr7	72433783	72434077	(86911896)	+	AluJr	SINE/Alu	1	300	(12)	3662303
16	8.4	7.5	2.3	chr7	72446922	72446961	(86899012)	+	GA-rich	Low_complexity	1	43	(0)	3662336
24	11.0	3.8	3.6	chr7	72447245	72447297	(86898676)	+	(TGC)n	Simple_repeat	1	55	(0)	3662337
2140	14.4	0.0	0.0	chr7	72733978	72734282	(86611691)	+	AluSx3	SINE/Alu	2	306	(5)	3662955
3226	17.6	4.8	1.7	chr7	72734283	72735287	(86610686)	+	L1MA5	LINE/L1	4748	5825	(475)	3662954
13	12.5	0.0	0.0	chr7	73308407	73308432	(86037541)	+	(TCCCC)n	Simple_repeat	1	26	(0)	3664323
12	25.5	0.0	0.0	chr7	73308615	73308651	(86037322)	+	(CCACC)n	Simple_repeat	1	37	(0)	3664324
1250	27.2	4.4	8.8	chr7	83201431	83201933	(76144040)	+	LTR16B1	LTR/ERVL	1	480	(0)	3681940
1964	21.1	6.0	1.4	chr7	83710063	83710312	(75635661)	C	L1MCa	LINE/L1	(6052)	456	185	3682623
2534	18.4	15.4	2.8	chr7	83710313	83710945	(75635028)	C	LTR8A	LTR/ERV1	(0)	727	1	3682625
628	23.3	0.7	4.1	chr7	83924839	83924984	(75420989)	+	AluJo	SINE/Alu	137	277	(35)	3682942
38	8.3	0.0	0.0	chr7	83924992	83925042	(75420931)	+	(TC)n	Simple_repeat	1	51	(0)	3682943
6003	19.4	5.1	4.5	chr7	87230029	87231593	(72114380)	+	MER52A	LTR/ERV1	1	1755	(0)	3686961
17	23.4	0.0	2.0	chr7	88510875	88510890	(70835083)	+	(TATA)n	Simple_repeat	1	16	(0)	3688659
2780	19.4	14.5	7.5	chr7	88510891	88511648	(70834325)	C	LTR8B	LTR/ERV1	(0)	820	1	3688660
13	24.2	4.1	0.0	chr7	88759582	88759630	(70586343)	+	G-rich	Low_complexity	1	51	(0)	3688944
12	19.9	2.3	4.4	chr7	88760100	88760143	(70585830)	+	(ACACAA)n	Simple_repeat	1	45	(0)	3688945
20	10.9	7.8	1.8	chr7	90596343	90596393	(68749580)	+	(GGC)n	Simple_repeat	1	55	(0)	3691355
13	9.8	0.0	0.0	chr7	90596516	90596537	(68749436)	+	(GAG)n	Simple_repeat	1	22	(0)	3691356
26	22.3	3.5	2.2	chr7	92447832	92447918	(66898055)	+	(GGCGGC)n	Simple_repeat	1	90	(0)	3693909
15	9.6	2.7	5.3	chr7	92448026	92448062	(66897911)	+	(GGCG)n	Simple_repeat	1	38	(0)	3693910
29	0.0	0.0	0.0	chr7	95686086	95686110	(63659863)	+	(AC)n	Simple_repeat	1	25	(0)	3698350
19	15.9	0.0	0.0	chr7	95686111	95686142	(63659831)	+	(TA)n	Simple_repeat	2	33	(0)	3698351
12	8.8	10.5	2.4	chr7	95772508	95772545	(63573428)	+	G-rich	Low_complexity	1	42	(0)	3698469
15	29.2	2.9	1.4	chr7	95772666	95772733	(63573240)	+	(CCG)n	Simple_repeat	1	70	(0)	3698470
12	21.7	0.0	0.0	chr7	95772813	95772844	(63573129)	+	(CCACC)n	Simple_repeat	1	32	(0)	3698471
490	29.0	2.0	7.9	chr7	96420007	96420204	(62925769)	+	MIR3	SINE/MIR	1	183	(25)	3699359
14	8.5	0.0	3.7	chr7	98106950	98106976	(61238997)	+	(GGC)n	Simple_repeat	1	27	(0)	3701943
20	20.6	2.0	0.0	chr7	98107089	98107138	(61238835)	+	(CGGA)n	Simple_repeat	1	51	(0)	3701944
16	11.7	0.0	0.0	chr7	98107207	98107234	(61238739)	+	(GCT)n	Simple_repeat	1	28	(0)	3701945
2328	8.5	0.3	4.1	chr7	98692115	98692430	(60653543)	+	AluSx1	SINE/Alu	1	304	(8)	3703169
24	6.9	0.0	0.0	chr7	98692431	98692461	(60653512)	+	(GA)n	Simple_repeat	1	31	(0)	3703170
918	20.6	1.2	0.0	chr7	98692633	98692792	(60653181)	C	LTR8B	LTR/ERV1	(0)	820	659	3703171
1281	12.8	0.0	0.6	chr7	98692796	98692975	(60652998)	C	AluSx1	SINE/Alu	(0)	312	134	3703172
625	28.4	15.7	7.7	chr7	99079532	99080289	(60265684)	+	L1M5	LINE/L1	2676	3532	(2614)	3703919
1543	12.9	2.4	11.0	chr7	99365305	99365630	(59980343)	+	AluJo	SINE/Alu	2	298	(14)	3704579
12	25.9	1.9	3.6	chr7	100272046	100272099	(59073874)	+	G-rich	Low_complexity	1	55	(0)	3706205
15	9.1	0.0	0.0	chr7	100272316	100272339	(59073634)	+	(TGC)n	Simple_repeat	1	24	(0)	3706206
236	36.2	8.5	4.6	chr7	100272470	100272750	(59073223)	C	L2b	LINE/L2	(28)	3347	3055	3706207
29	2.2	5.9	3.7	chr7	100479256	100479306	(58866667)	+	(CTC)n	Simple_repeat	1	54	(0)	3706677
17	30.0	0.0	0.0	chr7	100479352	100479408	(58866565)	+	(CTGCTG)n	Simple_repeat	1	57	(0)	3706678
4082	6.6	1.8	1.3	chr7	100920086	100920256	(58425717)	C	MER41A	LTR/ERV1	(383)	171	1	3707650
332	26.8	3.9	1.6	chr7	100920274	100920398	(58425575)	C	L1MCc	LINE/L1	(5521)	902	775	3707652
732	24.8	0.7	0.0	chr7	100920568	100920720	(58425253)	C	LTR8A	LTR/ERV1	(0)	727	574	3707653
2411	14.8	4.8	0.5	chr7	100920740	100921141	(58424832)	C	MER83	LTR/ERV1	(28)	420	1	3707654
18	23.8	2.7	4.0	chr7	102433016	102433089	(56912884)	+	(CTCCC)n	Simple_repeat	1	76	(0)	3710997
15	23.2	1.3	7.8	chr7	102433626	102433701	(56912272)	+	G-rich	Low_complexity	1	77	(0)	3710998
8405	19.5	2.0	4.4	chr7	104021703	104023502	(55322471)	+	MER52A	LTR/ERV1	1	1755	(0)	3713522
183	35.9	0.0	0.0	chr7	104023676	104023739	(55322234)	+	MIRc	SINE/MIR	166	229	(39)	3713523
1932	15.0	1.4	1.0	chr7	104023764	104024057	(55321916)	+	AluJb	SINE/Alu	1	295	(17)	3713524
2065	14.4	1.5	0.3	chr7	104927431	104927758	(54418215)	C	MER34B	LTR/ERV1	(233)	332	1	3714835
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
2167	25.4	5.2	4.3	chr7	105703501	105704134	(53641839)	+	LTR82A	LTR/ERVL	233	872	(0)	3716415
401	30.1	6.1	1.6	chr7	105704194	105704318	(53641655)	+	L2b	LINE/L2	3244	3374	(1)	3716416
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
2254	21.6	12.3	4.1	chr7	106612340	106612378	(52733595)	C	L1ME1	LINE/L1	(11)	6341	6304	3717833
2272	14.6	1.3	4.6	chr7	106612379	106612788	(52733185)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3717834
2260	11.1	0.0	0.0	chr7	107179490	107179786	(52166187)	+	AluSz	SINE/Alu	1	297	(15)	3718716
2199	13.2	0.0	0.0	chr7	108591264	108591558	(50754415)	C	AluSz6	SINE/Alu	(17)	295	1	3720766
7870	8.9	1.2	0.1	chr7	113335937	113337810	(46008163)	+	L1PA8A	LINE/L1	4548	6442	(4)	3726991
230	29.9	0.7	16.8	chr7	114572958	114573130	(44772843)	+	MER117	DNA/hAT-Charlie	53	197	(0)	3728565
19	0.0	2.6	7.7	chr7	114658793	114658830	(44687143)	+	(CTTCTCC)n	Simple_repeat	1	39	(0)	3728664
465	33.0	10.4	1.8	chr7	120881177	120881395	(38464578)	C	MIRb	SINE/MIR	(10)	258	19	3736955
22	3.9	0.0	0.0	chr7	120950749	120950775	(38395198)	+	(T)n	Simple_repeat	1	27	(0)	3737033
13	8.5	0.0	3.7	chr7	122144145	122144171	(37201802)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3738703
631	25.9	2.3	3.9	chr7	128191932	128192154	(31153819)	+	MIR	SINE/MIR	7	229	(39)	3746770
33	25.2	5.8	1.4	chr7	128405902	128406040	(30939933)	+	(CGCGGC)n	Simple_repeat	1	147	(0)	3747156
4738	19.3	2.3	4.3	chr7	129177961	129178336	(30167637)	C	L1MD2	LINE/L1	(878)	5481	5106	3748658
1039	18.0	2.7	1.6	chr7	129178339	129178521	(30167452)	C	FAM	SINE/Alu	(0)	185	1	3748660
2814	19.0	4.2	6.4	chr7	129178524	129179243	(30166730)	C	L1MD2	LINE/L1	(1027)	5119	4416	3748658
1152	15.8	1.5	4.0	chr7	130626903	130627104	(28718869)	C	AluJb	SINE/Alu	(29)	283	87	3751388
282	19.5	3.5	3.5	chr7	130627123	130627207	(28718766)	C	L1MC4	LINE/L1	(5766)	449	365	3751387
2558	13.6	1.4	0.9	chr7	130627212	130627649	(28718324)	+	MER83	LTR/ERV1	1	440	(8)	3751389
18	17.2	0.0	0.0	chr7	130627766	130627804	(28718169)	+	G-rich	Low_complexity	1	39	(0)	3751390
230	30.1	7.4	1.7	chr7	130627807	130627921	(28718052)	C	L1MC4	LINE/L1	(5982)	233	112	3751387
15	12.4	0.0	7.3	chr7	130901319	130901359	(28444614)	+	(TGCTCCC)n	Simple_repeat	1	41	(0)	3751800
891	24.8	15.0	3.0	chr7	132991977	132992483	(26353490)	+	LTR50	LTR/ERVL	24	602	(193)	3755224
247	35.4	13.2	1.2	chr7	134047627	134047792	(25298181)	+	MIRb	SINE/MIR	20	208	(60)	3756857
3196	17.1	4.5	7.6	chr7	134047824	134048537	(25297436)	C	LTR8	LTR/ERV1	(0)	691	1	3756858
223	22.6	1.9	0.0	chr7	134406735	134406787	(24939186)	+	MIR3	SINE/MIR	148	201	(7)	3757440
17	4.9	0.0	0.0	chr7	135160736	135160756	(24185217)	+	(A)n	Simple_repeat	1	21	(0)	3758528
274	27.4	9.3	2.5	chr7	135170070	135170189	(24175784)	C	MIRb	SINE/MIR	(110)	158	30	3758537
289	32.1	8.9	0.0	chr7	138387897	138388008	(20957965)	C	MLT1I	LTR/ERVL-MaLR	(88)	323	201	3763503
322	31.6	4.9	0.0	chr7	138388044	138388179	(20957794)	C	MLT1I	LTR/ERVL-MaLR	(268)	143	1	3763503
3780	13.8	14.0	4.0	chr7	138388191	138388438	(20957535)	C	LTR8B	LTR/ERV1	(4)	816	581	3763505
2404	7.4	1.0	0.0	chr7	138388439	138388735	(20957238)	+	AluSx1	SINE/Alu	1	300	(12)	3763506
1972	12.4	1.3	4.6	chr7	138925537	138925859	(20420114)	+	AluJo	SINE/Alu	1	312	(0)	3764556
16	14.9	2.7	0.0	chr7	138981106	138981142	(20364831)	+	(GCCAGCA)n	Simple_repeat	1	38	(0)	3764670
14	11.6	2.3	6.8	chr7	138981144	138981186	(20364787)	+	G-rich	Low_complexity	1	44	(0)	3764671
32	0.0	0.0	0.0	chr7	138981540	138981569	(20364404)	+	(GCCT)n	Simple_repeat	1	30	(0)	3764672
857	33.6	8.8	2.6	chr7	139750505	139751070	(19594903)	+	L4_B_Mam	LINE/RTE-X	4284	4887	(54)	3766127
503	25.6	9.8	1.9	chr7	141715713	141715871	(17630102)	+	MIRb	SINE/MIR	1	173	(95)	3769717
356	31.5	15.8	2.1	chr7	141715903	141716184	(17629789)	+	L2c	LINE/L2	3044	3371	(16)	3769718
438	14.7	0.0	0.0	chr7	142722289	142722356	(16623617)	+	MER75	DNA/PiggyBac	3	70	(444)	3770938
1390	9.5	1.0	1.0	chr7	142722765	142722966	(16623007)	+	MER75B	DNA/PiggyBac	42	243	(0)	3770939
1208	18.3	8.1	5.2	chr7	143125331	143125864	(16220109)	+	LTR8A	LTR/ERV1	113	727	(0)	3771425
617	24.8	5.5	0.6	chr7	143125865	143126104	(16219869)	+	L1M5	LINE/L1	5314	5586	(656)	3771426
7763	6.6	0.9	0.4	chr7	144726723	144727724	(14618249)	+	LTR13	LTR/ERVK	1	1007	(0)	3773593
1989	12.8	8.0	1.2	chr7	144743639	144743977	(14601996)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3773623
567	11.3	12.6	0.0	chr7	144743978	144744074	(14601899)	+	THE1B-int	LTR/ERVL-MaLR	1	111	(1469)	3773623
406	12.3	9.5	0.0	chr7	144744072	144744145	(14601828)	+	THE1B-int	LTR/ERVL-MaLR	235	319	(1261)	3773623
14	31.0	6.0	0.0	chr7	146175794	146175877	(13170096)	+	(TCTC)n	Simple_repeat	1	89	(0)	3775530
823	26.3	10.2	4.1	chr7	148496848	148497121	(10848852)	+	HAL1	LINE/L1	1296	1588	(919)	3778876
2380	13.8	3.0	3.2	chr7	148497122	148497554	(10848419)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3778877
1192	25.2	5.1	8.9	chr7	149130396	149130681	(10215292)	C	L1ME1	LINE/L1	(455)	5724	5454	3780096
3166	14.1	0.2	2.8	chr7	149130682	149131191	(10214782)	C	LOR1a	LTR/ERV1	(0)	497	1	3780104
262	22.2	1.2	9.0	chr7	149148688	149148737	(10197236)	C	MER33	DNA/hAT-Charlie	(0)	324	281	3780153
1401	12.3	4.8	0.0	chr7	149148738	149148863	(10197110)	+	MER30	DNA/hAT-Charlie	1	126	(104)	3780154
11393	11.8	1.2	0.4	chr7	149372630	149374245	(9971728)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	3	3780581
2289	13.7	11.4	0.8	chr7	149374248	149374629	(9971344)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3780582
16	13.4	0.0	2.9	chr7	149714673	149714707	(9631266)	+	G-rich	Low_complexity	1	35	(0)	3781084
29	10.1	3.6	1.8	chr7	151341712	151341766	(8004207)	+	(GCG)n	Simple_repeat	1	57	(0)	3783281
28	2.8	0.0	5.0	chr7	151341988	151342027	(8003946)	+	(GGGCCG)n	Simple_repeat	1	40	(0)	3783282
184	28.7	4.1	12.2	chr7	151373041	151373147	(7972826)	+	Tigger19b	DNA/TcMar-Tigger	234	331	(219)	3783342
222	29.2	0.0	4.4	chr7	151373219	151373286	(7972687)	+	MIR3	SINE/MIR	96	160	(48)	3783343
15	23.4	3.9	5.0	chr7	151631866	151631942	(7714031)	+	(CCCCGGA)n	Simple_repeat	1	80	(0)	3783798
13	18.8	0.0	5.0	chr7	151632021	151632060	(7713913)	+	(GGCCG)n	Simple_repeat	1	40	(0)	3783799
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
10030	9.3	10.7	1.6	chr7	151972008	151973174	(7372799)	+	THE1D-int	LTR/ERVL-MaLR	1	1321	(310)	3784346
13	24.6	2.3	0.0	chr7	152436347	152436389	(6909584)	+	(GCTC)n	Simple_repeat	1	44	(0)	3785121
11471	10.2	1.6	1.3	chr7	152470969	152471815	(6874158)	+	THE1A-int	LTR/ERVL-MaLR	444	1274	(306)	3785198
593	29.7	8.9	4.1	chr7	152759225	152759543	(6586430)	C	L2a	LINE/L2	(0)	3426	3091	3785944
13	19.5	0.0	2.7	chr7	152759662	152759698	(6586275)	+	G-rich	Low_complexity	1	37	(0)	3785945
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
2275	12.8	0.0	1.3	chr7	153216708	153217020	(6128953)	+	AluSx1	SINE/Alu	3	311	(1)	3786656
255	36.0	3.1	1.1	chr7	155299494	155299631	(4046342)	C	L2c	LINE/L2	(0)	3375	3234	3789477
272	29.1	11.3	3.9	chr7	155299679	155299901	(4046072)	C	MIRb	SINE/MIR	(26)	242	2	3789478
248	33.6	1.8	0.0	chr7	155349768	155349874	(3996099)	C	HAL1	LINE/L1	(907)	1600	1492	3789534
39	4.7	0.0	0.0	chr7	156051317	156051361	(3294612)	+	(ATGA)n	Simple_repeat	1	45	(0)	3790417
234	37.0	2.3	0.0	chr7	156378539	156378665	(2967308)	+	MIR3	SINE/MIR	21	150	(58)	3790832
12	17.6	0.0	5.6	chr7	157010779	157010814	(2335159)	+	(CCGCC)n	Simple_repeat	1	36	(0)	3791706
419	28.0	9.5	5.2	chr7	157031832	157032042	(2313931)	+	MIRb	SINE/MIR	2	222	(46)	3791729
2614	23.5	10.8	0.8	chr7	158194811	158196344	(1149629)	C	L1MEc	LINE/L1	(4293)	2107	274	3793071
23	15.6	0.0	0.0	chr7	158587621	158587664	(758309)	+	(GCAGCA)n	Simple_repeat	1	44	(0)	3793401
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
6737	15.4	6.0	7.1	chr7	158706810	158708087	(637886)	C	LTR2752	LTR/ERV1	(0)	1263	1	3793574
694	26.4	8.8	0.4	chr7	158857138	158857377	(488596)	+	MIR	SINE/MIR	1	262	(0)	3793799
3521	23.2	9.7	1.8	chr8	604009	605246	(144533390)	C	L1MD3	LINE/L1	(2012)	6374	5004	3794994
1752	17.1	5.3	0.0	chr8	2042252	2042572	(143096064)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	3796370
638	29.2	1.8	5.2	chr8	8060192	8060452	(137078184)	+	MIR	SINE/MIR	7	250	(12)	3804098
1673	15.9	1.7	5.6	chr8	8060536	8060837	(137077799)	+	AluJb	SINE/Alu	1	290	(22)	3804099
2063	25.8	12.9	10.4	chr8	9470626	9471624	(135667012)	+	L1MC4a	LINE/L1	6966	7946	(96)	3806537
11	9.6	8.6	2.6	chr8	13276803	13276837	(131861799)	+	(GCAGGTG)n	Simple_repeat	1	38	(0)	3812420
16	13.1	0.0	0.0	chr8	17027213	17027237	(128111399)	+	(C)n	Simple_repeat	1	25	(0)	3817596
24	18.2	2.4	6.9	chr8	17027418	17027516	(128111120)	+	(GGC)n	Simple_repeat	1	94	(0)	3817597
12	16.9	2.9	2.8	chr8	17156407	17156441	(127982195)	+	(GGC)n	Simple_repeat	1	36	(0)	3817787
30	18.9	3.7	2.4	chr8	17156444	17156525	(127982111)	+	(CGC)n	Simple_repeat	1	85	(0)	3817788
2063	13.8	13.1	7.5	chr8	17576149	17576601	(127562035)	C	MER51E	LTR/ERV1	(0)	482	1	3818391
315	28.6	0.9	3.5	chr8	17576794	17576909	(127561727)	+	LTR88b	LTR/Gypsy?	692	804	(33)	3818392
989	28.2	12.9	2.4	chr8	22291724	22292513	(122846123)	C	L2a	LINE/L2	(0)	3426	2550	3825927
13	19.1	0.0	0.0	chr8	23854663	23854692	(121283944)	+	(TGC)n	Simple_repeat	1	30	(0)	3828627
42	10.2	0.0	0.0	chr8	23854706	23854770	(121283866)	+	(GCT)n	Simple_repeat	1	65	(0)	3828628
3608	15.6	6.5	4.0	chr8	28010197	28010904	(117127732)	+	LTR8A	LTR/ERV1	1	727	(0)	3835383
386	21.3	11.6	0.0	chr8	28010996	28011117	(117127519)	C	LTR50	LTR/ERVL	(3)	792	655	3835384
526	29.0	4.0	0.6	chr8	30965129	30965297	(114173339)	C	MLT1J2	LTR/ERVL-MaLR	(25)	423	249	3840797
1655	22.0	3.8	0.8	chr8	30965298	30965682	(114172954)	C	LTR8B	LTR/ERV1	(0)	820	424	3840798
18	21.4	0.0	0.0	chr8	37697414	37697456	(107441180)	+	(CTC)n	Simple_repeat	1	43	(0)	3850806
13	9.6	2.6	7.5	chr8	37697642	37697698	(107440938)	+	(GGAGCC)n	Simple_repeat	1	54	(0)	3850807
375	17.9	9.7	0.0	chr8	38104469	38104552	(107034084)	C	Charlie2b	DNA/hAT-Charlie	(860)	1922	1830	3851640
353	27.1	1.5	7.2	chr8	38104561	38104699	(107033937)	C	Charlie2a	DNA/hAT-Charlie	(2541)	320	190	3851654
264	24.1	1.2	9.8	chr8	38104839	38104930	(107033706)	+	L2	LINE/L2	2317	2400	(1019)	3851655
41	0.0	0.0	0.0	chr8	38184467	38184504	(106954132)	+	(AAATA)n	Simple_repeat	1	38	(0)	3851826
598	25.6	13.2	2.5	chr8	38184505	38184578	(106954058)	C	LTR50	LTR/ERVL	(254)	541	472	3851824
504	20.0	20.7	2.0	chr8	38184609	38184807	(106953829)	C	LTR50	LTR/ERVL	(516)	279	34	3851824
2358	8.7	0.0	0.3	chr8	38184809	38185106	(106953530)	+	AluSg	SINE/Alu	1	297	(13)	3851827
15	23.2	0.0	2.1	chr8	38232081	38232127	(106906509)	+	G-rich	Low_complexity	1	47	(0)	3851938
3760	18.4	3.6	8.6	chr8	38966796	38967664	(106170972)	C	L1PB3	LINE/L1	(1)	6153	5325	3853297
16	13.3	3.0	0.0	chr8	40374971	40375003	(104763633)	+	(TTTC)n	Simple_repeat	1	34	(0)	3855284
365	31.2	5.1	0.0	chr8	40542816	40542927	(104595709)	+	MIR3	SINE/MIR	67	184	(24)	3855538
317	31.8	3.1	0.8	chr8	41652686	41652812	(103485824)	C	MIR3	SINE/MIR	(14)	194	65	3857388
2494	18.4	7.8	3.3	chr8	41687203	41687715	(103450921)	+	LTR26C	LTR/ERV1	2	539	(0)	3857438
184	32.1	6.5	11.3	chr8	42147874	42148147	(102990489)	C	L2c	LINE/L2	(183)	3204	2945	3858226
18	6.8	3.2	0.0	chr8	42148218	42148248	(102990388)	+	(AAAT)n	Simple_repeat	1	32	(0)	3858227
1386	17.6	11.0	0.4	chr8	46618018	46618284	(98520352)	+	AluJo	SINE/Alu	2	300	(12)	3860951
1058	16.1	0.0	0.0	chr8	52587761	52587915	(92550721)	C	AluJo	SINE/Alu	(8)	304	150	3868351
425	20.3	1.7	0.0	chr8	52587923	52588040	(92550596)	C	L1MEf	LINE/L1	(4126)	2514	2395	3868352
4450	23.7	5.9	6.3	chr8	52588054	52589528	(92549108)	C	L1MEf	LINE/L1	(4232)	2408	941	3868352
349	29.3	3.7	6.3	chr8	54394604	54394768	(90743868)	+	MIRc	SINE/MIR	45	209	(59)	3871020
16	20.3	0.0	2.4	chr8	56206096	56206137	(88932499)	+	A-rich	Low_complexity	1	42	(0)	3873663
1057	17.6	0.5	4.1	chr8	56409569	56409763	(88728873)	+	MER5A	DNA/hAT-Charlie	2	189	(0)	3873917
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
296	29.8	4.1	1.4	chr8	57969979	57970121	(87168515)	+	L1M6	LINE/L1	21	167	(6329)	3875995
2669	10.4	0.0	0.8	chr8	62906505	62906871	(82231765)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3882453
9877	13.8	3.6	0.9	chr8	62906874	62908459	(82230177)	+	THE1B-int	LTR/ERVL-MaLR	3	1631	(0)	3882453
13	24.7	0.0	0.0	chr8	63085735	63085772	(82052864)	+	G-rich	Low_complexity	1	38	(0)	3882685
16	26.6	2.9	2.9	chr8	63086354	63086360	(82052276)	+	(TCTT)n	Simple_repeat	1	27	(43)	3882686
18	22.6	0.0	3.8	chr8	63086361	63086413	(82052223)	+	(TTCTTCC)n	Simple_repeat	1	53	(0)	3882687
16	26.6	2.9	2.9	chr8	63086414	63086421	(82052215)	+	(TCTT)n	Simple_repeat	28	70	(0)	3882686
21	10.7	2.4	2.3	chr8	63086704	63086745	(82051891)	+	(TATT)n	Simple_repeat	1	43	(0)	3882688
892	15.5	2.7	1.4	chr8	63086746	63086893	(82051743)	C	AluJr	SINE/Alu	(26)	286	137	3882689
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
12	5.6	0.0	0.0	chr8	63168758	63168776	(81969860)	+	(CGG)n	Simple_repeat	1	19	(0)	3882839
14	5.0	0.0	0.0	chr8	63168838	63168858	(81969778)	+	(GGC)n	Simple_repeat	1	21	(0)	3882840
13	17.5	0.0	2.9	chr8	63169077	63169110	(81969526)	+	(GCGG)n	Simple_repeat	1	34	(0)	3882841
2161	8.9	0.3	6.0	chr8	64431119	64431284	(80707352)	+	AluSc8	SINE/Alu	136	299	(12)	3884440
221	31.9	3.2	2.1	chr8	64431546	64431638	(80706998)	C	L2b	LINE/L2	(5)	3370	3277	3884443
41249	10.2	3.5	0.7	chr8	65863622	65870079	(79268557)	+	HERVH48-int	LTR/ERV1	1	6647	(7)	3886535
4234	16.9	9.5	1.6	chr8	66341723	66342475	(78796161)	+	LTR8B	LTR/ERV1	2	820	(0)	3887208
532	25.1	3.2	7.7	chr8	66342476	66342725	(78795911)	C	MER34B	LTR/ERV1	(49)	516	295	3887207
23	17.5	0.0	0.0	chr8	66666906	66666950	(78471686)	+	(GGC)n	Simple_repeat	1	45	(0)	3887825
14	15.6	5.6	0.0	chr8	66667191	66667226	(78471410)	+	(CACT)n	Simple_repeat	1	38	(0)	3887826
11	21.9	3.9	3.8	chr8	66667227	66667241	(78471395)	+	(CACTCA)n	Simple_repeat	1	53	(0)	3887827
2718	12.8	11.5	2.3	chr8	68288227	68288713	(76849923)	+	LTR26C	LTR/ERV1	2	539	(0)	3890494
12	14.1	3.0	2.9	chr8	68288762	68288794	(76849842)	+	(TTTAA)n	Simple_repeat	1	34	(0)	3890495
2363	12.3	5.6	0.0	chr8	68390751	68391123	(76747513)	C	MLT2C1	LTR/ERVL	(0)	397	3	3890643
15	3.1	8.1	5.0	chr8	69430771	69430807	(75707829)	+	(TTCCT)n	Simple_repeat	1	40	(0)	3892007
12	14.1	7.5	0.0	chr8	69834053	69834086	(75304550)	+	(GCGTGC)n	Simple_repeat	1	36	(0)	3892658
50	0.0	0.0	0.0	chr8	69834087	69834129	(75304507)	+	(CA)n	Simple_repeat	1	43	(0)	3892659
16682	8.4	2.2	0.7	chr8	70462898	70466169	(74672467)	C	L1PA6	LINE/L1	(2836)	3310	5	3893854
2547	21.2	5.0	2.6	chr8	70914229	70914815	(74223821)	C	L1ME3A	LINE/L1	(511)	5662	5059	3894504
2367	23.8	3.5	9.8	chr8	70914831	70915568	(74223068)	C	LTR8	LTR/ERV1	(0)	691	1	3894506
3764	16.9	15.0	0.3	chr8	72965094	72965792	(72172844)	C	LTR8B	LTR/ERV1	(0)	820	1	3897156
2281	16.8	4.9	3.9	chr8	74790926	74791214	(70347422)	C	MLT2B2	LTR/ERVL	(203)	312	3	3900121
2241	18.3	1.9	0.3	chr8	74791229	74791639	(70346997)	C	MLT2C2	LTR/ERVL	(56)	511	1	3900126
8314	19.3	5.1	3.2	chr8	75783598	75785319	(69353317)	C	MER52A	LTR/ERV1	(0)	1755	1	3901454
1786	26.8	2.9	1.2	chr8	76482848	76483357	(68655279)	+	LTR40a	LTR/ERVL	1	519	(0)	3902294
3524	11.7	1.3	2.7	chr8	79124098	79124652	(66013984)	+	LTR10B1	LTR/ERV1	1	547	(0)	3905536
2121	13.1	3.9	3.6	chr8	79513190	79513552	(65625084)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3906099
668	24.1	7.7	0.1	chr8	80485463	80485637	(64652999)	C	Eulor6D	DNA?	(10)	292	104	3907901
21	14.4	1.6	6.5	chr8	80486106	80486166	(64652470)	+	(CCCCA)n	Simple_repeat	1	62	(0)	3907902
911	21.9	1.4	3.1	chr8	83643990	83644214	(61494422)	C	MER31A	LTR/ERV1	(0)	485	265	3912106
1597	21.6	3.7	1.7	chr8	83644215	83644562	(61494074)	+	MLT1A0	LTR/ERVL-MaLR	1	355	(10)	3912107
25	19.4	5.6	0.0	chr8	84183092	84183162	(60955474)	+	(GCGGCA)n	Simple_repeat	1	75	(0)	3912802
24	25.0	2.1	4.2	chr8	84183290	84183382	(60955254)	+	(CGC)n	Simple_repeat	1	95	(0)	3912803
744	30.9	8.1	6.6	chr8	84659132	84659554	(60479082)	C	LTR16A	LTR/ERVL	(0)	451	22	3913485
3067	17.9	6.9	4.1	chr8	85427613	85428318	(59710318)	C	LTR8A	LTR/ERV1	(0)	727	1	3914559
403	28.5	12.9	6.5	chr8	86877449	86878033	(58260603)	C	L1M7	LINE/L1	(4684)	1534	907	3916741
10712	10.0	1.0	0.8	chr8	87304635	87306917	(57831719)	+	L1PB1	LINE/L1	3865	6148	(3)	3917233
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
4822	13.4	6.0	0.6	chr8	89801410	89802185	(55336451)	+	LTR8B	LTR/ERV1	1	820	(0)	3920279
315	27.3	0.0	4.8	chr8	89802186	89802271	(55336365)	+	L1M5	LINE/L1	5633	5714	(410)	3920278
1168	18.4	16.9	3.8	chr8	89802273	89802677	(55335959)	C	Charlie1b	DNA/hAT-Charlie	(224)	299	1	3920280
13	19.0	0.0	5.0	chr8	92102807	92102846	(53035790)	+	(GCCC)n	Simple_repeat	1	40	(0)	3923412
16	10.5	3.2	0.0	chr8	92103158	92103188	(53035448)	+	(CTCC)n	Simple_repeat	1	32	(0)	3923413
17	21.4	3.9	5.0	chr8	92103352	92103428	(53035208)	+	(GCGCCGC)n	Simple_repeat	1	80	(0)	3923414
7633	11.0	8.6	1.3	chr8	92193874	92195065	(52943571)	C	HSMAR1	DNA/TcMar-Mariner	(0)	1287	1	3923573
2903	11.3	12.7	1.9	chr8	93746255	93746739	(51391897)	C	LTR35A	LTR/ERV1	(0)	547	3	3925722
4585	13.0	8.3	1.1	chr8	93746800	93747559	(51391077)	C	LTR8B	LTR/ERV1	(0)	820	1	3925723
214	26.8	15.2	5.1	chr8	94719427	94719544	(50419092)	+	MIR3	SINE/MIR	18	149	(59)	3927427
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
18	29.3	0.0	0.0	chr8	94949388	94949445	(50189191)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3927879
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
16	13.2	0.0	0.0	chr8	100134501	100134530	(45004106)	+	(A)n	Simple_repeat	1	30	(0)	3936218
16	13.7	8.0	1.9	chr8	100134542	100134591	(45004045)	+	A-rich	Low_complexity	1	54	(0)	3936219
11744	9.0	0.6	0.5	chr8	103562120	103563698	(41574938)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3942503
2908	28.4	10.0	4.6	chr8	106200738	106202259	(38936377)	C	HERV16-int	LTR/ERVL	(3133)	1863	170	3946176
2142	9.6	6.8	6.6	chr8	107814099	107814478	(37324158)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3948487
2166	8.9	0.3	1.4	chr8	109648993	109649301	(35489335)	C	AluSc	SINE/Alu	(0)	309	1	3951145
2148	25.7	3.5	7.5	chr8	112114850	112115542	(33023094)	+	LTR8	LTR/ERV1	16	679	(12)	3954369
3569	23.1	7.5	9.8	chr8	116068660	116069470	(29069166)	+	MER57-int	LTR/ERV1	2728	3532	(2731)	3959490
2439	8.1	0.0	0.3	chr8	116069471	116069768	(29068868)	+	AluY	SINE/Alu	1	297	(14)	3959491
828	35.3	6.5	3.8	chr8	119643613	119644397	(25494239)	C	L2b	LINE/L2	(13)	3362	2559	3965113
19	34.0	0.0	0.0	chr8	121628160	121628223	(23510413)	+	(TT)n	Simple_repeat	1	64	(0)	3968584
3126	17.3	3.7	7.6	chr8	123247683	123248407	(21890229)	+	L1MB4	LINE/L1	5479	6174	(6)	3971481
23	15.1	1.5	7.2	chr8	124372428	124372495	(20766141)	+	G-rich	Low_complexity	1	69	(0)	3973578
19	15.8	1.8	5.4	chr8	124372641	124372695	(20765941)	+	(GCAGCC)n	Simple_repeat	1	56	(0)	3973579
2267	26.3	7.6	5.9	chr8	127886221	127887486	(17251150)	C	L1MEb	LINE/L1	(4876)	1324	36	3980325
2405	5.4	0.0	0.0	chr8	130518528	130518836	(14619800)	C	AluY	SINE/Alu	(0)	311	2	3985243
277	26.8	6.0	2.2	chr8	130749522	130749625	(14389011)	+	MIR	SINE/MIR	42	149	(113)	3985695
394	23.3	0.0	0.0	chr8	130749661	130749746	(14388890)	+	L2a	LINE/L2	3303	3388	(38)	3985696
2122	11.9	5.0	1.6	chr8	130750076	130750443	(14388193)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3985697
325	27.5	21.3	3.9	chr8	135715242	135715521	(9423115)	+	L2a	LINE/L2	3047	3388	(38)	3994470
2190	12.5	0.0	0.0	chr8	143150322	143150618	(1988018)	+	AluSz	SINE/Alu	1	297	(15)	4005820
1285	26.8	6.9	4.6	chr8	143231311	143231794	(1906842)	+	L1MD1	LINE/L1	5484	5986	(256)	4005939
431	23.2	2.1	8.0	chr8	143231820	143231860	(1906776)	+	L1MD2	LINE/L1	6216	6248	(111)	4005942
2329	10.9	0.0	3.4	chr8	143231861	143232182	(1906454)	+	AluSx1	SINE/Alu	1	311	(1)	4005943
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
18	14.1	4.8	6.2	chr8	143989992	143990053	(1148583)	+	(GCCCC)n	Simple_repeat	1	65	(0)	4006924
14	24.7	0.0	5.2	chr8	143990143	143990200	(1148436)	+	(CACCGGC)n	Simple_repeat	1	58	(0)	4006925
25	23.7	0.0	7.8	chr8	143990327	143990429	(1148207)	+	(CGG)n	Simple_repeat	1	103	(0)	4006926
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
983	19.0	4.8	0.0	chr8	144233153	144233368	(905268)	C	L1MB3	LINE/L1	(3)	6180	5954	4007362
1068	22.4	3.6	0.7	chr8	144233505	144233801	(904835)	C	L1MB3	LINE/L1	(183)	6000	5695	4007363
1187	11.0	26.7	0.5	chr8	144486148	144486365	(652271)	C	AluSz6	SINE/Alu	(15)	297	2	4007674
2455	25.7	12.9	3.5	chr8	144486366	144486983	(651653)	C	L1MD2	LINE/L1	(689)	5670	4922	4007673
347	18.6	20.0	0.8	chr8	144845559	144845683	(292953)	C	HERVL40-int	LTR/ERVL	(80)	5450	5296	4008190
437	23.2	7.6	1.4	chr8	144846103	144846312	(292324)	+	HERVL40-int	LTR/ERVL	4068	4334	(1196)	4008191
14	27.9	2.9	2.9	chr9	841955	842022	(137552695)	+	(GGC)n	Simple_repeat	1	70	(0)	4009858
2509	6.9	0.0	0.3	chr9	842231	842534	(137552183)	C	AluSx	SINE/Alu	(8)	304	2	4009859
13	13.2	6.1	0.0	chr9	915712	915744	(137478973)	+	(TATT)n	Simple_repeat	1	35	(0)	4010003
2314	8.7	0.0	0.3	chr9	915746	916032	(137478685)	C	AluY	SINE/Alu	(25)	286	1	4010004
1419	18.7	5.7	1.6	chr9	2139141	2139445	(136255272)	C	LTR8B	LTR/ERV1	(0)	820	503	4011707
16	7.8	0.0	3.5	chr9	2467108	2467136	(135927581)	+	(AAC)n	Simple_repeat	1	29	(0)	4012146
14	15.6	0.0	0.0	chr9	2469094	2469122	(135925595)	+	GA-rich	Low_complexity	1	29	(0)	4012149
15	8.1	0.0	3.6	chr9	4298042	4298069	(134096648)	+	(GCGA)n	Simple_repeat	1	28	(0)	4014804
323	29.6	16.5	5.3	chr9	4678876	4679047	(133715670)	+	MIR	SINE/MIR	17	216	(52)	4015463
2370	19.0	4.9	0.0	chr9	5308658	5309146	(133085571)	+	LTR53	LTR/ERVL	6	519	(0)	4016298
12	12.6	0.0	3.6	chr9	6413413	6413440	(131981277)	+	(GCGGC)n	Simple_repeat	1	28	(0)	4017979
15	19.6	0.0	0.0	chr9	7799980	7800008	(130594709)	+	(C)n	Simple_repeat	1	29	(0)	4020246
36	5.3	0.0	0.0	chr9	13992612	13992651	(124402066)	+	(AC)n	Simple_repeat	1	40	(0)	4028372
13	9.8	0.0	0.0	chr9	14313779	14313800	(124080917)	+	(GCC)n	Simple_repeat	1	22	(0)	4028782
13	14.1	3.0	2.9	chr9	14313833	14313865	(124080852)	+	(TTG)n	Simple_repeat	1	34	(0)	4028783
23	16.3	0.0	6.5	chr9	14313943	14314004	(124080713)	+	(GGCG)n	Simple_repeat	1	62	(0)	4028784
20	12.6	2.1	4.2	chr9	14314318	14314364	(124080353)	+	(CGCC)n	Simple_repeat	1	48	(0)	4028785
2105	28.9	9.0	5.9	chr9	16037293	16038201	(122356516)	+	L1MEd	LINE/L1	589	1545	(5558)	4031366
27	25.4	1.7	5.7	chr9	16192460	16192468	(122202249)	+	(CCCT)n	Simple_repeat	1	121	(0)	4031598
27	23.1	4.5	3.5	chr9	16192469	16192578	(122202139)	+	(CTCTCCT)n	Simple_repeat	1	115	(0)	4031599
211	25.6	1.3	11.4	chr9	16385970	16386057	(122008660)	C	L2a	LINE/L2	(71)	3355	3277	4031883
198	26.4	3.6	0.0	chr9	16386057	16386109	(122008608)	+	L2b	LINE/L2	3297	3351	(24)	4031884
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
4058	14.3	10.7	0.3	chr9	17844710	17845443	(120549274)	C	LTR8B	LTR/ERV1	(0)	820	1	4033890
16	4.5	0.0	0.0	chr9	23821697	23821719	(114572998)	+	(GGC)n	Simple_repeat	1	23	(0)	4042332
19	6.5	3.1	0.0	chr9	23821748	23821779	(114572938)	+	(CCGCG)n	Simple_repeat	1	33	(0)	4042333
185	24.4	0.0	0.0	chr9	27574061	27574105	(110820612)	+	L2a	LINE/L2	3377	3421	(5)	4047385
326	20.0	2.6	0.0	chr9	32526496	32526570	(105868147)	C	L1ME2	LINE/L1	(18)	6146	6070	4053796
1609	23.5	7.6	10.3	chr9	32526585	32527494	(105867223)	C	L1ME2	LINE/L1	(537)	5627	4679	4053796
1530	15.1	8.3	0.7	chr9	33290031	33290308	(105104409)	+	AluJr	SINE/Alu	2	302	(10)	4055139
673	19.0	5.9	3.3	chr9	34929947	34930126	(103464591)	+	UCON53	Unknown	48	232	(2)	4058115
16	14.2	0.0	0.0	chr9	35665364	35665394	(102729323)	+	(GCAGG)n	Simple_repeat	1	31	(0)	4059258
252	25.5	7.6	9.2	chr9	35665589	35665801	(102728916)	+	L1ME4a	LINE/L1	5763	5977	(147)	4059259
341	36.2	7.4	0.6	chr9	35883894	35884057	(102510660)	+	L1MEd	LINE/L1	1004	1179	(5907)	4059563
2213	23.1	5.5	4.8	chr9	35884087	35884790	(102509927)	C	L1M5	LINE/L1	(1350)	4796	4087	4059564
440	23.2	2.9	2.9	chr9	36190486	36190587	(102204130)	C	MIRc	SINE/MIR	(69)	199	98	4060131
12	19.5	4.7	2.2	chr9	36765227	36765269	(101629448)	+	G-rich	Low_complexity	1	45	(0)	4061414
498	29.1	7.5	0.5	chr9	36765458	36765654	(101629063)	+	L2a	LINE/L2	3214	3425	(1)	4061415
15	16.2	0.0	10.2	chr9	38068449	38068507	(100326210)	+	(GAGGCG)n	Simple_repeat	1	59	(0)	4063871
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
16	11.7	0.0	0.0	chr9	64774844	64774871	(73619846)	+	(GCG)n	Simple_repeat	1	28	(0)	4075710
2025	27.7	6.4	7.4	chr9	65386109	65387421	(73007296)	+	SST1	Satellite/centr	262	1560	(3)	4076186
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
2348	9.2	0.3	0.7	chr9	70629324	70629628	(67765089)	C	AluSq2	SINE/Alu	(1)	312	9	4083502
16	13.2	4.4	4.3	chr9	72364921	72364965	(66029752)	+	GA-rich	Low_complexity	1	47	(0)	4086363
2445	21.1	10.7	8.9	chr9	72633749	72633901	(65760816)	C	MER21C	LTR/ERVL	(37)	901	742	4086946
3659	17.4	9.8	1.1	chr9	72633902	72634649	(65760068)	C	LTR8B	LTR/ERV1	(0)	820	1	4086947
3195	25.6	11.3	6.6	chr9	75829957	75830723	(62563994)	+	HAL1	LINE/L1	873	1640	(867)	4091504
5300	24.1	8.5	5.5	chr9	75830847	75832908	(62561809)	C	Charlie2a	DNA/hAT-Charlie	(194)	2667	529	4091509
1951	14.5	1.4	5.1	chr9	76333930	76334300	(62060417)	C	THE1B	LTR/ERVL-MaLR	(7)	357	1	4092326
18	17.2	0.0	5.9	chr9	76394543	76394593	(62000124)	+	(GCCCC)n	Simple_repeat	1	51	(0)	4092455
200	33.1	0.0	0.0	chr9	76394868	76394942	(61999775)	+	L2c	LINE/L2	3109	3183	(192)	4092456
5251	10.1	3.7	0.4	chr9	79312186	79312942	(59081775)	+	LTR1	LTR/ERV1	1	783	(0)	4097068
367	32.3	4.6	7.2	chr9	79312974	79313333	(59081384)	C	LTR78B	LTR/ERV1	(408)	888	539	4097069
19	7.2	0.0	0.0	chr9	79571362	79571390	(58823327)	+	(CCA)n	Simple_repeat	1	29	(0)	4097445
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
2635	5.6	0.0	0.3	chr9	79652182	79652486	(58742231)	C	AluY	SINE/Alu	(7)	304	1	4097560
1581	13.1	0.4	2.5	chr9	79752515	79752750	(58641967)	+	AluSz	SINE/Alu	60	290	(22)	4097701
1985	16.3	0.0	0.0	chr9	79752751	79753051	(58641666)	+	AluSz	SINE/Alu	1	301	(11)	4097702
9887	11.7	4.2	5.3	chr9	79753052	79753466	(58641251)	C	THE1B-int	LTR/ERVL-MaLR	(1210)	370	2	4097700
2083	12.5	7.7	0.0	chr9	79753467	79753801	(58640916)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	4097700
1518	22.9	5.7	5.5	chr9	82419983	82420326	(55974391)	+	LTR54	LTR/ERV1	1	345	(165)	4101452
6208	2.5	0.9	0.0	chr9	82420327	82421059	(55973658)	C	L1PA3	LINE/L1	(3)	6152	5413	4101453
5210	9.5	4.6	0.7	chr9	87687991	87689342	(50705375)	C	L1PA16	LINE/L1	(3)	6163	4747	4109865
17	17.1	0.0	4.7	chr9	93576342	93576384	(44818333)	+	(CGG)n	Simple_repeat	1	43	(0)	4118328
694	31.3	11.2	7.3	chr9	95542589	95543572	(42851145)	C	L2b	LINE/L2	(0)	3387	2370	4121355
2891	9.3	4.6	0.2	chr9	98797900	98798339	(39596378)	C	L1P4	LINE/L1	(381)	5785	5326	4127218
3262	19.1	4.8	0.4	chr9	98798339	98799049	(39595668)	+	L1M2	LINE/L1	3669	4412	(1731)	4127219
16	17.8	2.6	0.0	chr9	99601306	99601343	(38793374)	+	(TAA)n	Simple_repeat	1	39	(0)	4128776
2969	27.9	8.5	5.2	chr9	99946476	99948063	(38446654)	C	L1ME3B	LINE/L1	(4438)	1977	332	4129339
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
3046	16.8	16.3	2.1	chr9	105562113	105562811	(32831906)	C	LTR8B	LTR/ERV1	(3)	817	1	4137714
14	13.1	0.0	7.7	chr9	107489694	107489732	(30904985)	+	(GCC)n	Simple_repeat	1	39	(0)	4140834
188	30.1	11.0	4.2	chr9	109167666	109167783	(29226934)	C	MIRc	SINE/MIR	(28)	240	114	4143926
1984	26.2	8.6	2.7	chr9	110629693	110631063	(27763654)	C	L1ME3Cz	LINE/L1	(5393)	1007	88	4146572
317	23.3	12.0	7.2	chr9	111961520	111961630	(26433087)	C	L1MD	LINE/L1	(2880)	3266	3150	4148883
270	27.4	1.6	0.0	chr9	111961710	111961771	(26432946)	C	L2b	LINE/L2	(0)	3375	3313	4148884
1013	20.4	1.0	4.6	chr9	111961785	111962000	(26432717)	C	MER63A	DNA/hAT-Blackjack	(2)	208	1	4148885
10097	11.3	6.1	2.7	chr9	112283174	112284413	(26110304)	+	THE1D-int	LTR/ERVL-MaLR	3	1327	(304)	4149513
2017	17.6	0.0	0.0	chr9	112284414	112284725	(26109992)	+	AluSz6	SINE/Alu	1	312	(0)	4149514
11	19.5	10.0	1.5	chr9	113060165	113060224	(25334493)	+	(GCCAGCTGC)n	Simple_repeat	1	66	(0)	4150941
378	29.1	9.2	4.2	chr9	114672203	114672384	(23722333)	+	MIR3	SINE/MIR	12	202	(6)	4154200
662	23.6	7.3	1.7	chr9	114672581	114672761	(23721956)	+	L2a	LINE/L2	2660	2851	(568)	4154201
994	28.5	7.5	1.6	chr9	116765414	116765855	(21628862)	+	L1ME4a	LINE/L1	5544	6013	(111)	4158024
16	13.4	4.7	2.2	chr9	120793486	120793528	(17601189)	+	(GGAGGTG)n	Simple_repeat	1	45	(0)	4165720
402	27.9	3.9	4.5	chr9	120793617	120793770	(17600947)	C	MIRb	SINE/MIR	(29)	239	87	4165721
26	20.9	0.0	0.0	chr9	125189733	125189788	(13204929)	+	(GCG)n	Simple_repeat	1	56	(0)	4174090
253	18.4	0.0	0.0	chr9	126761488	126761536	(11633181)	C	MamRep38	DNA/hAT	(246)	49	1	4176986
214	12.9	0.0	0.0	chr9	126893289	126893319	(11501398)	C	L2c	LINE/L2	(8)	3379	3349	4177259
434	28.7	6.5	1.7	chr9	126893411	126893587	(11501130)	C	MamRep605	LTR?	(89)	760	575	4177260
3169	26.5	12.6	3.5	chr9	127171783	127173015	(11221702)	C	HAL1b	LINE/L1	(417)	2004	618	4177740
1299	22.2	11.8	5.8	chr9	127892576	127893091	(10501626)	+	LTR8B	LTR/ERV1	270	820	(0)	4179267
346	34.3	7.9	0.6	chr9	127893102	127893277	(10501440)	C	L2b	LINE/L2	(248)	3127	2938	4179261
2105	12.4	0.7	4.1	chr9	129560035	129560349	(8834368)	C	AluSz	SINE/Alu	(8)	304	1	4183130
386	6.1	0.0	8.3	chr9	129560350	129560399	(8834318)	+	MADE1	DNA/TcMar-Mariner	34	80	(0)	4183129
188	33.1	11.8	3.1	chr9	129560400	129560561	(8834156)	C	L2b	LINE/L2	(605)	2814	2637	4183128
13	20.6	6.8	3.2	chr9	129803226	129803284	(8591433)	+	(GGC)n	Simple_repeat	1	63	(0)	4183683
16	20.5	3.6	5.2	chr9	129803417	129803472	(8591245)	+	(GC)n	Simple_repeat	1	58	(0)	4183684
2127	13.9	0.0	0.7	chr9	129930059	129930361	(8464356)	C	AluJb	SINE/Alu	(10)	302	2	4183921
2042	10.9	0.4	2.1	chr9	129970881	129971190	(8423527)	C	AluSx3	SINE/Alu	(0)	311	1	4184007
924	28.2	6.5	1.0	chr9	133309584	133309987	(5084730)	C	L1MEi	LINE/L1	(615)	1597	1170	4190390
2447	5.8	0.7	0.0	chr9	133347238	133347531	(5047186)	+	AluSx1	SINE/Alu	3	298	(14)	4190449
4589	11.2	2.2	5.1	chr9	135468602	135469313	(2925404)	+	LTR8	LTR/ERV1	1	691	(0)	4193280
19279	10.8	0.4	1.0	chr9	136786163	136787981	(1606736)	C	HERVK-int	LTR/ERVK	(4972)	2564	743	4194804
13	15.4	3.3	9.5	chr9	136865891	136865951	(1528766)	+	(CCT)n	Simple_repeat	1	63	(0)	4194886
17	22.3	6.0	3.4	chr9	136866032	136866114	(1528603)	+	(CCAGCCC)n	Simple_repeat	1	88	(0)	4194887
14	14.2	0.0	3.0	chr9	136866127	136866159	(1528558)	+	(CCCGG)n	Simple_repeat	1	33	(0)	4194888
181	28.7	16.7	1.7	chr9	137201277	137201393	(1193324)	+	MER5A	DNA/hAT-Charlie	19	156	(33)	4195341
8228	5.6	1.2	0.3	chr9	137261687	137262684	(1132033)	C	LTR13	LTR/ERVK	(0)	1007	1	4195409
48	3.9	0.0	0.0	chr9	137502686	137502738	(891979)	+	(GGGGGACGC)n	Simple_repeat	1	53	(0)	4195703
2450	4.4	0.3	1.0	chr9	137578171	137578465	(816252)	C	AluY	SINE/Alu	(18)	293	1	4195811
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
280	23.2	8.7	1.0	chr9	137579231	137579326	(815391)	+	LTR8A	LTR/ERV1	106	209	(518)	4195813
288	32.3	0.0	0.3	chrX	2895067	2895163	(153145732)	+	MIR	SINE/MIR	170	265	(3)	4363787
534	26.4	8.9	2.2	chrX	9995455	9996127	(146044768)	C	L1ME3Cz	LINE/L1	(48)	949	238	4375753
431	21.5	5.1	3.7	chrX	9996143	9996277	(146044618)	C	L1ME3Cz	LINE/L1	(851)	146	10	4375754
332	23.3	2.3	2.3	chrX	9996362	9996449	(146044446)	+	MER2B	DNA/TcMar-Tigger	6	93	(243)	4375755
19	15.4	0.0	0.0	chrX	9996457	9996492	(146044403)	+	(GTG)n	Simple_repeat	1	36	(0)	4375756
501	13.7	0.0	1.4	chrX	9996495	9996567	(146044328)	C	AluJr	SINE/Alu	(198)	114	43	4375757
1605	13.8	1.1	4.4	chrX	9996628	9996900	(146043995)	+	MER2	DNA/TcMar-Tigger	81	344	(1)	4375758
3558	12.2	11.0	6.2	chrX	10695427	10695737	(145345158)	+	LTR8A	LTR/ERV1	363	727	(0)	4376879
603	16.2	12.4	2.0	chrX	10695765	10695915	(145344980)	+	MER33	DNA/hAT-Charlie	1	169	(155)	4376881
10820	12.2	3.6	0.2	chrX	12127589	12129162	(143911733)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	4379063
3159	13.4	4.1	0.2	chrX	13153785	13154273	(142886622)	+	LTR8B	LTR/ERV1	309	817	(3)	4380706
1785	22.1	5.0	1.8	chrX	13154344	13154790	(142886105)	C	L1ME1	LINE/L1	(0)	6179	5718	4380708
216	16.7	6.7	0.0	chrX	15172372	15172413	(140868482)	C	MIR3	SINE/MIR	(26)	182	138	4383895
918	20.9	5.9	0.5	chrX	15172445	15172636	(140868259)	C	MER58A	DNA/hAT-Charlie	(16)	208	6	4383896
847	25.0	6.2	1.2	chrX	15172650	15172896	(140867999)	+	MER5C1	DNA/hAT-Charlie	1	260	(3)	4383897
1602	30.4	9.3	4.2	chrX	15537366	15537963	(140502932)	C	MER115	DNA/hAT-Tip100	(1)	692	61	4384534
18	20.4	0.0	5.4	chrX	17375955	17376010	(138664885)	+	(GCC)n	Simple_repeat	1	56	(0)	4387742
303	28.6	7.4	0.7	chrX	17690611	17690771	(138350124)	C	L2c	LINE/L2	(58)	3329	3125	4388261
1296	23.8	4.0	2.0	chrX	18293683	18294129	(137746766)	+	L1MEd	LINE/L1	1307	1762	(5341)	4389213
681	0.0	0.0	0.0	chrX	18674909	18674981	(137365914)	C	tRNA-Val-GTA	tRNA	(3)	73	1	4389954
2090	14.8	0.0	0.3	chrX	18916877	18917174	(137123721)	C	AluJo	SINE/Alu	(15)	297	1	4390392
2356	28.4	12.8	6.8	chrX	18917175	18917260	(137123635)	+	HAL1	LINE/L1	1499	1571	(936)	4390383
2254	12.1	0.0	0.0	chrX	18917261	18917558	(137123337)	C	AluSz	SINE/Alu	(14)	298	1	4390393
2356	28.4	12.8	6.8	chrX	18917559	18917859	(137123036)	+	HAL1	LINE/L1	1572	1886	(621)	4390383
1932	10.4	0.0	0.0	chrX	24358534	24358807	(131682088)	+	AluY	SINE/Alu	39	311	(0)	4399366
3596	21.0	4.2	3.7	chrX	24358808	24359177	(131681718)	+	L1ME1	LINE/L1	5483	5855	(324)	4399365
17	16.8	2.5	0.0	chrX	24465283	24465322	(131575573)	+	(GCTGCT)n	Simple_repeat	1	41	(0)	4399580
11659	10.4	0.4	1.3	chrX	25704872	25706516	(130334379)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	4401488
11	7.5	6.7	3.1	chrX	37685777	37685806	(118355089)	+	(CCAGGT)n	Simple_repeat	1	32	(0)	4417771
15	28.4	0.0	4.6	chrX	37685891	37685955	(118354940)	+	(GCC)n	Simple_repeat	1	65	(0)	4417772
858	22.0	2.2	3.5	chrX	39452929	39453155	(116587740)	C	MIR	SINE/MIR	(35)	233	14	4420558
197	26.4	1.9	0.0	chrX	39453150	39453202	(116587693)	+	MIRb	SINE/MIR	187	240	(28)	4420560
11	25.1	1.8	5.2	chrX	40153892	40153948	(115886947)	+	G-rich	Low_complexity	1	58	(0)	4421858
16	3.6	6.5	3.0	chrX	40154110	40154140	(115886755)	+	(AAT)n	Simple_repeat	1	33	(0)	4421859
18	17.9	0.0	4.2	chrX	40154221	40154268	(115886627)	+	(CTCCC)n	Simple_repeat	1	48	(0)	4421860
343	23.8	25.2	3.0	chrX	41110473	41110671	(114930224)	+	MIR	SINE/MIR	4	261	(1)	4423692
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
2803	10.3	0.5	0.0	chrX	45894413	45894821	(110146074)	C	L1PA12	LINE/L1	(0)	6168	5758	4431394
2096	23.4	1.6	4.7	chrX	45894822	45895119	(110145776)	C	LTR40a	LTR/ERVL	(30)	489	205	4431393
1356	12.3	7.9	0.0	chrX	45895120	45895227	(110145668)	+	MER30	DNA/hAT-Charlie	1	126	(104)	4431395
28	0.0	0.0	0.0	chrX	45895228	45895254	(110145641)	+	(T)n	Simple_repeat	1	27	(0)	4431396
17	8.8	0.0	0.0	chrX	46577118	46577141	(109463754)	+	(T)n	Simple_repeat	1	24	(0)	4432410
196	33.6	4.2	3.4	chrX	46577142	46577258	(109463637)	C	L2c	LINE/L2	(1)	3386	3269	4432411
2710	18.7	8.7	5.0	chrX	47433114	47433665	(108607230)	+	MER77B	LTR/ERVL	1	583	(117)	4434157
19	21.3	1.9	1.9	chrX	47523359	47523410	(108517485)	+	GA-rich	Low_complexity	1	53	(0)	4434355
15	19.6	2.0	3.9	chrX	49043230	49043279	(106997616)	+	(GCCCG)n	Simple_repeat	1	51	(0)	4437371
192	22.2	0.0	2.2	chrX	50682248	50682293	(105358602)	+	L2a	LINE/L2	2546	2590	(829)	4439679
654	33.1	10.6	7.3	chrX	50682407	50682783	(105358112)	C	L2c	LINE/L2	(0)	3387	3011	4439681
2091	8.0	0.0	0.4	chrX	52920406	52920669	(103120226)	+	AluSx4	SINE/Alu	34	296	(14)	4442714
9766	14.0	3.0	0.8	chrX	56545026	56546565	(99494330)	C	THE1C-int	LTR/ERVL-MaLR	(54)	1577	3	4448282
10483	12.9	0.6	0.7	chrX	56608824	56609736	(99431159)	C	MSTA-int	LTR/ERVL-MaLR	(717)	914	1	4448354
1697	17.9	13.8	1.3	chrX	56609737	56610110	(99430785)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	4448354
17	24.4	1.9	0.0	chrX	57121834	57121886	(98919009)	+	(CCGCCC)n	Simple_repeat	1	54	(0)	4448819
4232	19.4	5.2	2.9	chrX	69546439	69547914	(86492981)	+	MER52A	LTR/ERV1	1	1755	(0)	4458374
246	30.8	5.7	7.1	chrX	72018233	72018428	(84022467)	+	MIRb	SINE/MIR	8	200	(68)	4462538
394	25.5	3.9	2.0	chrX	72277439	72277538	(83763357)	C	L2b	LINE/L2	(17)	3358	3257	4463037
326	26.9	6.3	3.2	chrX	72298082	72298204	(83742691)	+	L2b	LINE/L2	3237	3363	(12)	4463088
207	33.1	11.2	1.3	chrX	73913231	73913383	(82127512)	+	MIR3	SINE/MIR	21	190	(18)	4464906
1930	17.4	0.3	1.0	chrX	73913930	73914065	(82126830)	+	AluJb	SINE/Alu	1	136	(176)	4464907
365	27.2	14.4	3.9	chrX	73943786	73943965	(82096930)	+	MIRc	SINE/MIR	25	226	(42)	4464969
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
654	19.3	6.2	2.2	chrX	78140011	78140195	(77900700)	C	MER53	DNA/hAT	(0)	193	1	4469562
3726	13.9	4.2	0.6	chrX	80483816	80484436	(75556459)	+	LTR9B	LTR/ERV1	1	644	(0)	4471869
22	19.1	2.8	4.1	chrX	100409953	100410023	(55630872)	+	(TGAGTG)n	Simple_repeat	1	73	(0)	4494261
16	29.0	0.0	0.0	chrX	100410216	100410265	(55630630)	+	(GCT)n	Simple_repeat	1	50	(0)	4494262
14	16.3	3.6	7.0	chrX	100410495	100410549	(55630346)	+	(CAGG)n	Simple_repeat	1	57	(0)	4494263
3667	15.0	7.4	2.0	chrX	101058366	101059052	(54981843)	+	LTR8A	LTR/ERV1	1	727	(0)	4495311
13	10.4	2.9	5.6	chrX	101059160	101059179	(54981716)	+	(ATCAA)n	Simple_repeat	1	20	(0)	4495312
2001	10.0	0.0	1.9	chrX	101059180	101059449	(54981446)	+	AluSq	SINE/Alu	1	265	(48)	4495313
15	20.1	0.0	5.9	chrX	101291370	101291420	(54749475)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4495764
364	26.8	6.0	6.0	chrX	102743352	102743514	(53297381)	C	L1ME3G	LINE/L1	(271)	653	489	4497578
4825	12.5	2.2	2.5	chrX	102743515	102744243	(53296652)	C	LTR8A	LTR/ERV1	(0)	727	1	4497579
519	24.6	5.0	11.0	chrX	107971886	107972122	(48068773)	+	MER103C	DNA/hAT-Charlie	2	223	(74)	4505120
473	25.6	8.4	6.3	chrX	107972206	107972249	(48068646)	+	MIRb	SINE/MIR	75	117	(151)	4505121
1014	21.3	2.2	0.0	chrX	107972250	107972423	(48068472)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	4505122
473	25.6	8.4	6.3	chrX	107972424	107972553	(48068342)	+	MIRb	SINE/MIR	118	253	(15)	4505121
541	17.7	5.0	2.6	chrX	108475573	108475688	(47565207)	+	MER20	DNA/hAT-Charlie	1	119	(100)	4505876
408	25.9	5.4	1.4	chrX	108475728	108475868	(47565027)	+	MER46C	DNA/TcMar-Tigger	61	207	(131)	4505877
435	20.2	0.0	10.0	chrX	108475961	108476070	(47564825)	+	MER20	DNA/hAT-Charlie	121	219	(0)	4505878
399	22.1	9.5	4.2	chrX	108476077	108476265	(47564630)	C	L1M2	LINE/L1	(2122)	4024	3825	4505871
13	26.5	2.2	0.0	chrX	108735935	108735979	(47304916)	+	(GCG)n	Simple_repeat	1	46	(0)	4506167
15	20.5	0.0	0.0	chrX	108736260	108736293	(47304602)	+	(CTG)n	Simple_repeat	1	34	(0)	4506168
2204	13.5	0.0	0.3	chrX	112954893	112955204	(43085691)	C	AluSx1	SINE/Alu	(0)	312	2	4512175
267	22.1	2.3	3.4	chrX	112955335	112955423	(43085472)	C	HAL1b	LINE/L1	(24)	2397	2310	4512176
376	27.2	17.4	0.0	chrX	112955444	112955557	(43085338)	+	MIR	SINE/MIR	121	258	(4)	4512177
201	22.6	1.6	10.1	chrX	112955819	112955887	(43085008)	+	MIR3	SINE/MIR	145	207	(1)	4512178
8734	15.6	6.1	4.0	chrX	116936962	116938552	(39102343)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	4	4517175
673	25.9	7.2	5.8	chrX	118426087	118426414	(37614481)	+	L1MC5a	LINE/L1	2434	2766	(11)	4519160
2013	16.3	0.0	1.3	chrX	118426420	118426726	(37614169)	+	AluJb	SINE/Alu	1	303	(9)	4519161
11	20.9	6.8	0.0	chrX	118975719	118975762	(37065133)	+	G-rich	Low_complexity	1	47	(0)	4520258
2517	8.7	0.0	0.0	chrX	119594661	119594970	(36445925)	+	AluSg	SINE/Alu	1	310	(0)	4521382
3207	12.7	2.6	2.4	chrX	119594971	119595096	(36445799)	+	L1MD	LINE/L1	5482	5606	(753)	4521380
2419	8.0	0.3	0.0	chrX	119595097	119595397	(36445498)	+	AluSp	SINE/Alu	1	302	(11)	4521383
2228	10.9	1.0	0.0	chrX	119784626	119784919	(36255976)	C	AluSx	SINE/Alu	(15)	297	1	4521827
2750	14.9	11.9	9.4	chrX	123847044	123847248	(32193647)	+	LTR8B	LTR/ERV1	655	820	(0)	4527500
4676	11.6	1.6	8.1	chrX	123847249	123847585	(32193310)	+	L1MA4A	LINE/L1	5499	5829	(474)	4527502
806	30.3	7.8	5.0	chrX	128110948	128111346	(27929549)	+	L1PA13	LINE/L1	1025	1435	(5350)	4532972
4921	14.1	1.9	2.0	chrX	128111341	128112527	(27928368)	+	L1PA15	LINE/L1	4981	6165	(0)	4532973
29	9.7	2.3	0.0	chrX	130958748	130958791	(25082104)	+	(TC)n	Simple_repeat	1	45	(0)	4537357
43	2.5	0.0	0.0	chrX	130958792	130958832	(25082063)	+	(CA)n	Simple_repeat	1	41	(0)	4537358
27196	1.4	0.1	0.0	chrX	130958932	130964957	(25075938)	+	L1PA2	LINE/L1	124	6154	(1)	4537359
768	21.0	3.5	4.6	chrX	132014338	132014512	(24026383)	+	MIR	SINE/MIR	89	261	(1)	4538788
30	22.8	2.8	4.6	chrX	132488595	132488700	(23552195)	+	GA-rich	Low_complexity	1	109	(0)	4539413
25	23.8	0.0	2.7	chrX	132488895	132488967	(23551928)	+	(CAGCGG)n	Simple_repeat	1	73	(0)	4539414
14	14.6	0.0	3.1	chrX	133985348	133985379	(22055516)	+	(GGC)n	Simple_repeat	1	32	(0)	4541901
51	29.3	1.3	4.6	chrX	133985596	133985833	(22055062)	+	G-rich	Low_complexity	1	241	(0)	4541902
2000	16.4	0.7	0.0	chrX	134536586	134536895	(21504000)	+	AluJo	SINE/Alu	1	312	(0)	4542910
619	25.7	4.8	5.5	chrX	134536896	134537150	(21503745)	C	MLT1K	LTR/ERVL-MaLR	(327)	268	16	4542909
14	23.5	0.0	7.8	chrX	134915322	134915385	(21125510)	+	G-rich	Low_complexity	1	64	(0)	4543615
5280	11.4	2.8	1.3	chrX	136141401	136141745	(19899150)	+	L1MA5	LINE/L1	5433	5782	(518)	4545498
30	3.5	0.0	0.0	chrX	136141746	136141775	(19899120)	+	(AC)n	Simple_repeat	1	30	(0)	4545499
5280	11.4	2.8	1.3	chrX	136141776	136142153	(19898742)	+	L1MA5	LINE/L1	5783	6173	(127)	4545498
2163	15.9	10.3	0.5	chrX	145658230	145658615	(10382280)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4559454
10935	13.1	0.2	0.3	chrX	145658616	145660248	(10380647)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	4559454
89	33.0	2.0	3.9	chrX	149504517	149505021	(6535874)	+	GA-rich	Low_complexity	1	515	(0)	4564707
13	25.1	0.0	2.3	chrX	149505177	149505220	(6535675)	+	(GCCGCA)n	Simple_repeat	1	44	(0)	4564708
3986	22.5	3.5	5.7	chrX	149875489	149877191	(6163704)	+	L1MC3	LINE/L1	4743	6411	(1374)	4565117
355	30.7	3.8	5.2	chrX	152915994	152916127	(3124768)	C	L2b	LINE/L2	(23)	3403	3238	4569590
844	30.0	9.9	2.7	chrX	153460847	153461301	(2579594)	+	L1MD2	LINE/L1	651	1149	(5491)	4570298
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638