3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
12	18.8	2.6	2.6	chr1	2494687	2494742	(246461680)	+	(CTCCC)n	Simple_repeat	1	56	(0)	3270
17894	15.9	2.1	1.9	chr1	4287250	4291614	(244664808)	C	L1PA15	LINE/L1	(1129)	5637	1203	5101
1996	16.2	2.6	0.0	chr1	8554405	8554707	(240401715)	+	AluJo	SINE/Alu	1	311	(1)	11830
1184	19.7	6.5	0.8	chr1	8555123	8555383	(240401039)	+	MER58B	DNA/hAT-Charlie	4	280	(61)	11831
325	25.3	4.0	8.8	chr1	15627504	15627663	(233328759)	+	Charlie4z	DNA/hAT-Charlie	6	157	(10)	25705
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
12	16.4	2.8	2.7	chr1	17551993	17552028	(231404394)	+	G-rich	Low_complexity	1	37	(0)	29712
254	26.1	8.2	1.5	chr1	17552175	17552309	(231404113)	+	MIRc	SINE/MIR	3	155	(113)	29713
572	30.0	6.4	3.1	chr1	17552333	17552400	(231404022)	C	MIR	SINE/MIR	(0)	262	197	29714
1958	15.1	2.3	0.0	chr1	17552401	17552571	(231403851)	C	AluSz	SINE/Alu	(13)	299	128	29715
1507	17.5	8.9	4.5	chr1	23667125	23667427	(225288995)	C	Charlie1b	DNA/hAT-Charlie	(190)	333	2	43041
236	27.8	7.2	1.1	chr1	23667478	23667568	(225288854)	+	MIR1_Amn	SINE/MIR	38	134	(74)	43044
195	24.4	2.4	0.0	chr1	23667553	23667593	(225288829)	+	L2b	LINE/L2	3285	3326	(49)	43045
539	27.4	8.2	0.0	chr1	23667762	23667896	(225288526)	+	MIR	SINE/MIR	6	152	(110)	43046
1107	14.8	0.6	2.7	chr1	23667940	23667955	(225288467)	+	AluSx	SINE/Alu	120	134	(178)	43047
1501	16.4	5.2	8.9	chr1	23667956	23668070	(225288352)	+	AluJb	SINE/Alu	1	115	(197)	43048
55	0.0	0.0	0.0	chr1	23668071	23668117	(225288305)	+	(AC)n	Simple_repeat	1	47	(0)	43049
5157	7.2	2.6	1.4	chr1	25635854	25636869	(223319553)	C	MER11A	LTR/ERVK	(0)	1266	1	47546
2258	10.2	0.3	1.3	chr1	25636873	25637177	(223319245)	+	AluSz	SINE/Alu	1	302	(10)	47547
2372	10.0	0.7	0.0	chr1	33054748	33055056	(215901366)	C	AluSx	SINE/Alu	(1)	311	1	64346
333	25.0	11.5	7.8	chr1	33055086	33055302	(215901120)	C	LTR78B	LTR/ERV1	(81)	1215	990	64347
351	30.0	5.9	1.6	chr1	36223857	36224071	(212732351)	C	MIRc	SINE/MIR	(9)	259	29	70423
234	33.8	4.4	1.3	chr1	39539071	39539223	(209417199)	C	L2-1_AMi	LINE/L2	(610)	625	468	76886
1350	26.2	14.2	1.4	chr1	39539361	39539926	(209416496)	+	MER20B	DNA/hAT-Charlie	5	654	(129)	76887
4210	10.6	9.6	2.9	chr1	45305651	45307087	(203649335)	+	MER4-int	LTR/ERV1	1	1185	(5573)	87712
4086	9.8	6.3	1.3	chr1	45307090	45307784	(203648638)	+	MER4-int	LTR/ERV1	1764	2495	(4103)	87712
14104	17.4	1.7	1.0	chr1	48329584	48332999	(200623423)	+	L1PREC2	LINE/L1	642	4082	(3232)	93163
3016	15.9	7.1	3.4	chr1	51700355	51700944	(197255478)	C	L1MC4a	LINE/L1	(150)	7732	7116	99297
9386	15.9	2.4	0.4	chr1	56009404	56011502	(192944920)	+	L1PREC2	LINE/L1	561	3228	(4313)	108038
3842	12.1	0.2	6.1	chr1	56011480	56011711	(192944711)	+	L1PREC2	LINE/L1	3524	3842	(4313)	108038
2298	11.2	0.0	0.3	chr1	56011712	56012014	(192944408)	+	AluSc	SINE/Alu	1	302	(7)	108039
2111	26.3	9.0	4.2	chr1	56383486	56384651	(192571771)	+	L2a	LINE/L2	2205	3426	(0)	108717
1362	28.9	5.0	0.9	chr1	56971586	56972011	(191984411)	+	MLT1J1	LTR/ERVL-MaLR	1	444	(0)	109884
327	32.6	5.2	0.4	chr1	57058602	57058793	(191897629)	C	MIRb	SINE/MIR	(10)	252	45	110044
319	30.1	10.7	4.0	chr1	57058850	57059050	(191897372)	C	L2c	LINE/L2	(38)	3349	3134	110045
790	15.5	3.4	0.0	chr1	57757053	57757194	(191199228)	C	MER5A1	DNA/hAT-Charlie	(0)	166	20	111465
20	0.0	0.0	0.0	chr1	57757199	57757220	(191199202)	+	(T)n	Simple_repeat	1	22	(0)	111466
552	28.4	10.8	8.5	chr1	57757222	57757318	(191199104)	+	MIRb	SINE/MIR	8	105	(163)	111467
1634	18.1	7.9	7.1	chr1	57757319	57757781	(191198641)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	111468
20	8.0	0.0	0.0	chr1	57857854	57857880	(191098542)	+	(A)n	Simple_repeat	1	27	(0)	111656
346	31.1	0.9	15.5	chr1	57857881	57858068	(191098354)	C	MIR3	SINE/MIR	(31)	177	22	111657
275	28.4	12.1	4.7	chr1	59409523	59409598	(189546824)	C	MIRb	SINE/MIR	(32)	236	144	114811
30	0.0	0.0	0.0	chr1	59409599	59409624	(189546798)	+	(TA)n	Simple_repeat	1	26	(0)	114812
1719	18.2	1.0	1.4	chr1	63575596	63575886	(185380536)	C	AluJr	SINE/Alu	(22)	290	1	122284
229	30.4	1.8	1.5	chr1	64519402	64519473	(184436949)	+	MIR3	SINE/MIR	89	167	(63)	124035
379	24.9	8.9	6.0	chr1	64519602	64519785	(184436637)	C	Charlie19a	DNA/hAT-Charlie	(151)	235	46	124036
2390	24.4	7.8	2.2	chr1	64519786	64520607	(184435815)	C	LTR82A	LTR/ERVL	(0)	872	1	124037
266	18.8	0.9	0.0	chr1	64745611	64745674	(184210748)	C	MIR1_Amn	SINE/MIR	(89)	141	70	124433
419	23.4	7.6	3.7	chr1	64746151	64746314	(184210108)	C	L1ME4a	LINE/L1	(0)	6124	5954	124434
5319	18.5	3.8	2.2	chr1	66858930	66860170	(182096252)	+	L1MC2	LINE/L1	5079	6342	(2)	127871
249	30.8	11.7	2.1	chr1	66860394	66860486	(182095936)	C	L3	LINE/CR1	(11)	4088	3986	127877
371	19.6	7.1	3.4	chr1	66860493	66860640	(182095782)	+	Charlie30a	DNA/hAT-Charlie	496	649	(142)	127878
13136	18.0	1.4	1.9	chr1	70880716	70882980	(178073442)	C	L1PB4	LINE/L1	(4327)	2362	8	134074
10952	20.3	10.1	0.8	chr1	78211144	78213704	(170742718)	+	L1PA13	LINE/L1	11	2836	(3949)	144263
536	28.0	2.7	0.0	chr1	78814956	78815098	(170141324)	+	L2a	LINE/L2	2628	2774	(645)	145066
445	27.4	20.1	2.2	chr1	78815103	78815378	(170141044)	+	L2a	LINE/L2	3089	3426	(0)	145066
18	0.0	0.0	0.0	chr1	78821365	78821387	(170135035)	+	(AAAC)n	Simple_repeat	1	23	(0)	145076
2358	26.7	5.7	4.0	chr1	79138802	79140771	(169815651)	C	L1ME2	LINE/L1	(874)	5272	3448	145481
241	27.2	1.2	4.7	chr1	79141108	79141192	(169815230)	C	LTR16C	LTR/ERVL	(404)	85	4	145487
2463	17.0	1.1	5.7	chr1	82025285	82025739	(166930683)	+	MLT2B3	LTR/ERVL	108	541	(13)	149261
334	26.8	4.6	4.1	chr1	82233558	82233772	(166722650)	+	ALR/Alpha	Satellite/centr	1	216	(5)	149533
23059	9.3	1.2	1.1	chr1	82233789	82234903	(166721519)	C	L1PA10	LINE/L1	(3)	6480	5373	149534
430	28.8	13.8	0.0	chr1	83835294	83835487	(165120935)	+	MIRb	SINE/MIR	17	247	(21)	151707
8080	17.4	2.4	3.8	chr1	84338907	84339711	(164616711)	C	L1PA15	LINE/L1	(4761)	2024	1233	152368
242	30.1	3.4	0.9	chr1	85604338	85604451	(163351971)	C	L3	LINE/CR1	(644)	3455	3339	154439
2204	22.3	6.6	0.2	chr1	85604452	85604891	(163351531)	C	MLT1H2	LTR/ERVL-MaLR	(19)	470	1	154441
460	15.3	0.0	0.0	chr1	85723954	85724025	(163232397)	C	AluYj4	SINE/Alu	(13)	298	227	154646
812	23.6	7.0	7.0	chr1	85724026	85724054	(163232368)	+	L1MEg	LINE/L1	2048	2068	(4347)	154640
1978	14.6	0.0	3.0	chr1	85724055	85724355	(163232067)	C	AluSz	SINE/Alu	(13)	299	8	154647
1466	23.9	6.6	4.0	chr1	85724356	85724874	(163231548)	+	L1MEg	LINE/L1	2069	2610	(3709)	154640
1813	14.7	5.0	5.3	chr1	88619467	88619846	(160336576)	C	THE1D	LTR/ERVL-MaLR	(0)	381	3	158693
17317	13.4	3.1	2.4	chr1	88619847	88622545	(160333877)	+	L1PREC2	LINE/L1	3109	5959	(2182)	158694
5887	16.7	11.3	1.7	chr1	91003686	91006258	(157950164)	+	L1M4	LINE/L1	1069	4025	(2619)	162081
13309	12.7	2.8	1.0	chr1	91252943	91255672	(157700750)	+	L1PREC2	LINE/L1	2	4183	(3972)	162486
557	21.8	6.5	5.2	chr1	94321455	94321628	(154634794)	C	Charlie18a	DNA/hAT-Charlie	(62)	280	100	167617
354	30.2	11.8	2.0	chr1	94321774	94321925	(154634497)	+	L2b	LINE/L2	3207	3375	(0)	167619
382	28.5	7.9	3.1	chr1	94416010	94416201	(154540221)	C	L3	LINE/CR1	(2040)	2059	1858	167755
484	36.9	5.5	3.4	chr1	94416233	94416501	(154539921)	+	L2c	LINE/L2	3075	3349	(38)	167752
624	27.0	4.3	2.2	chr1	95096243	95096424	(153859998)	+	MER58A	DNA/hAT-Charlie	37	222	(2)	168841
444	31.5	8.5	5.2	chr1	95096550	95096857	(153859565)	C	LTR85a	LTR/Gypsy?	(2)	700	382	168842
580	26.2	11.7	8.8	chr1	98672118	98672422	(150284000)	C	MLT1I	LTR/ERVL-MaLR	(19)	392	78	173773
1976	15.5	0.0	1.6	chr1	99732845	99733148	(149223274)	C	AluJo	SINE/Alu	(13)	299	1	175259
2988	26.6	8.7	1.2	chr1	99733365	99734562	(149221860)	+	L1MC4	LINE/L1	6748	8042	(0)	175260
2563	11.9	6.0	2.0	chr1	99757871	99758316	(149198106)	C	MER4C	LTR/ERV1	(0)	465	1	175309
446	27.3	5.8	7.6	chr1	99758317	99758369	(149198053)	+	Tigger16a	DNA/TcMar-Tigger	866	917	(40)	175308
4694	8.4	3.5	3.0	chr1	99758375	99759412	(149197010)	+	MER11A	LTR/ERVK	1	1266	(0)	175310
14529	12.3	1.6	1.7	chr1	102833712	102835940	(146120482)	+	HERVK3-int	LTR/ERVK	1	2228	(4974)	179824
1032	36.3	9.7	1.7	chr1	105917134	105917850	(143038572)	C	L2a	LINE/L2	(246)	3180	2400	183408
200	24.7	10.5	0.0	chr1	108139535	108139611	(140816811)	C	MIR	SINE/MIR	(53)	209	124	186421
4754	8.6	1.8	1.9	chr1	109708621	109709643	(139246779)	+	MER11A	LTR/ERVK	1	1266	(0)	188981
891	23.2	17.2	1.6	chr1	114026218	114026467	(134929955)	C	AluSc8	SINE/Alu	(14)	297	1	195957
220	30.7	8.8	9.7	chr1	114026468	114026572	(134929850)	C	L2a	LINE/L2	(919)	2500	2417	195948
422	31.8	5.8	1.1	chr1	114026693	114026873	(134929549)	+	MIR	SINE/MIR	47	236	(26)	195958
216	26.6	11.1	12.3	chr1	115843114	115843332	(133113090)	+	L2c	LINE/L2	3149	3364	(23)	198782
320	31.0	7.9	0.8	chr1	115843424	115843540	(133112882)	+	MIRc	SINE/MIR	124	249	(19)	198783
3027	1.0	0.0	0.0	chr1	143842917	143843219	(105113203)	C	AluYa5	SINE/Alu	(8)	303	1	208416
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
386	28.2	2.8	0.0	chr1	147884016	147884118	(101072304)	C	L2c	LINE/L2	(82)	3305	3200	214772
13	18.3	2.6	2.5	chr1	151254877	151254915	(97701507)	+	G-rich	Low_complexity	1	40	(0)	220826
585	36.0	8.4	4.2	chr1	162293184	162293662	(86662760)	+	MamRTE1	LINE/RTE-BovB	1960	2460	(1352)	238903
219	31.6	10.9	1.7	chr1	162293753	162293868	(86662554)	+	MIR1_Amn	SINE/MIR	25	152	(78)	238904
13874	23.1	4.6	7.7	chr1	162915895	162918207	(86038215)	C	L1PREC2	LINE/L1	(3901)	4254	1903	239946
1346	27.7	12.9	3.0	chr1	164915940	164916866	(84039556)	C	L2a	LINE/L2	(1)	3425	2404	242822
2188	13.5	0.6	0.0	chr1	166006772	166007082	(82949340)	C	AluSq2	SINE/Alu	(0)	313	1	244668
15071	14.7	2.3	0.7	chr1	166007083	166009663	(82946759)	C	L1PREC2	LINE/L1	(4706)	3449	12	244665
19953	13.7	1.4	0.6	chr1	169262825	169264821	(79691601)	+	L1PREC2	LINE/L1	1230	3224	(3449)	249712
14775	15.1	2.2	0.8	chr1	170976654	170979010	(77977412)	C	L1PREC2	LINE/L1	(4344)	3801	1341	252046
188	30.9	13.8	0.0	chr1	171323919	171323999	(77632423)	+	MIRc	SINE/MIR	28	121	(147)	252506
14555	13.4	2.6	1.7	chr1	173146386	173148984	(75807438)	C	L1PA12	LINE/L1	(4217)	3938	1295	255190
2462	20.7	4.1	1.2	chr1	177532266	177532758	(71423664)	+	L1PA15	LINE/L1	1299	1806	(4979)	261780
1998	17.8	10.8	0.5	chr1	177532759	177533142	(71423280)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	261782
2345	8.6	0.3	1.3	chr1	178999594	178999897	(69956525)	+	AluSx1	SINE/Alu	1	301	(11)	263966
902	20.0	5.2	13.3	chr1	178999898	178999993	(69956429)	+	Arthur1B	DNA/hAT-Tip100	160	248	(977)	263964
1160	26.4	13.1	7.5	chr1	179000003	179000354	(69956068)	+	Arthur1	DNA/hAT-Tip100	258	643	(3304)	263967
4566	8.2	2.1	3.1	chr1	184680537	184681585	(64274837)	C	MER11A	LTR/ERVK	(0)	1266	1	273043
2343	22.4	6.3	1.7	chr1	184681586	184682280	(64274142)	+	L1MEb	LINE/L1	3812	4540	(1606)	273041
1664	20.2	8.5	4.5	chr1	185108725	185108950	(63847472)	C	MLT1C	LTR/ERVL-MaLR	(4)	463	236	273755
2224	13.2	0.0	0.7	chr1	185108951	185109254	(63847168)	C	AluSx3	SINE/Alu	(7)	304	3	273756
226	34.7	6.6	6.3	chr1	185819331	185819585	(63136837)	C	L3	LINE/CR1	(1308)	2791	2536	274815
4095	10.9	3.6	2.0	chr1	186347774	186348779	(62607643)	+	MER11A	LTR/ERVK	1	1266	(0)	275471
8263	20.5	2.0	3.2	chr1	188065822	188067162	(60889260)	C	L1M4c	LINE/L1	(4342)	2443	1103	277822
4489	19.0	3.7	1.4	chr1	189906603	189907909	(59048513)	C	L1PREC2	LINE/L1	(4344)	3819	2618	280209
239	32.6	5.8	1.0	chr1	197776194	197776292	(51180130)	C	MIRb	SINE/MIR	(40)	228	125	290338
2445	8.6	1.0	0.0	chr1	199778045	199778345	(49178077)	+	AluSx	SINE/Alu	1	304	(8)	292981
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
20	24.7	2.7	2.6	chr1	210251804	210251878	(38704544)	+	G-rich	Low_complexity	1	77	(0)	310842
246	29.3	3.5	2.9	chr1	210252037	210252208	(38704214)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	310843
390	31.9	13.6	2.0	chr1	210252365	210252559	(38703863)	C	MIRb	SINE/MIR	(31)	237	17	310844
28	0.0	0.0	0.0	chr1	212181984	212182010	(36774412)	+	(T)n	Simple_repeat	1	27	(0)	314062
1935	14.9	6.0	0.6	chr1	212182276	212182620	(36773802)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	314063
2079	11.6	2.7	0.3	chr1	225625524	225625815	(23330607)	C	AluSp	SINE/Alu	(14)	299	1	334254
2685	12.0	9.1	0.2	chr1	226044624	226045033	(22911389)	+	MSTB2	LTR/ERVL-MaLR	6	455	(2)	335087
1185	10.7	4.5	0.0	chr1	226100350	226100517	(22855905)	C	AluSg4	SINE/Alu	(1)	309	134	335208
347	10.9	0.0	0.0	chr1	226100518	226100572	(22855850)	+	Alu	SINE/Alu	245	299	(2)	335209
246	24.7	3.1	8.8	chr1	227194088	227194189	(21762233)	C	Charlie18a	DNA/hAT-Charlie	(0)	342	247	337061
321	30.2	6.2	5.3	chr1	227323427	227323727	(21632695)	+	L2-3_Crp	LINE/L2	781	1084	(1012)	337291
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1529	24.1	5.8	1.9	chr1	235604353	235604779	(13351643)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	22	350086
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
878	24.4	9.3	1.9	chr1	236480159	236480475	(12475947)	C	L1ME4c	LINE/L1	(147)	683	341	351733
396	21.6	11.8	0.0	chr1	242083358	242083454	(6872968)	C	MLT1M	LTR/ERVL-MaLR	(496)	176	67	360446
231	35.8	4.5	4.5	chr1	244353577	244353731	(4602691)	C	L2c	LINE/L2	(178)	3209	3055	364040
302	18.4	12.8	0.0	chr10	856237	856345	(132941077)	+	L1MC1	LINE/L1	5427	5551	(801)	371904
4930	19.4	4.7	1.2	chr10	856356	857407	(132940015)	+	L1MCa	LINE/L1	11	1100	(5408)	371911
17	25.1	6.7	0.0	chr10	3785252	3785326	(130012096)	+	(CCCGCC)n	Simple_repeat	1	80	(0)	375557
1408	24.2	6.2	6.6	chr10	6162408	6163053	(127634369)	C	L1MC4	LINE/L1	(796)	7246	6700	379016
283	22.9	1.4	1.4	chr10	12879587	12879657	(120917765)	+	MLT1K	LTR/ERVL-MaLR	521	591	(4)	389742
8632	15.0	2.9	2.2	chr10	19493985	19494978	(114302444)	+	L1PREC2	LINE/L1	2678	3683	(4472)	400671
2440	6.3	0.0	4.7	chr10	20894633	20894950	(112902472)	+	AluY	SINE/Alu	1	303	(8)	402659
684	33.6	5.2	4.7	chr10	21449331	21449776	(112347646)	+	L1MEd	LINE/L1	319	783	(6303)	403728
2441	8.1	0.3	0.0	chr10	21449777	21450074	(112347348)	+	AluSp	SINE/Alu	2	300	(13)	403729
395	20.7	11.2	2.6	chr10	23279639	23279752	(110517670)	C	MamGypsy2-I	LTR/Gypsy	(3906)	260	136	406537
444	35.8	10.6	0.0	chr10	23467461	23467756	(110329666)	C	L2	LINE/L2	(464)	2955	2625	406958
201	27.8	1.8	0.0	chr10	26348376	26348429	(107448993)	C	L2a	LINE/L2	(575)	2844	2790	411475
3662	11.2	6.8	2.8	chr10	26348431	26349493	(107447929)	+	MER11A	LTR/ERVK	1	1232	(4)	411484
884	18.0	1.8	0.6	chr10	32004607	32004774	(101792648)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	298	421155
769	25.6	6.0	10.1	chr10	32004895	32005311	(101792111)	+	ERV3-16A3_I-int	LTR/ERVL	1680	2078	(3148)	421156
1444	19.3	3.9	1.8	chr10	35130506	35130879	(98666543)	+	Tigger3c	DNA/TcMar-Tigger	7	601	(1)	426047
6550	23.1	6.0	4.0	chr10	51107836	51110696	(82686726)	+	L1ME1	LINE/L1	3239	6311	(23)	444362
8312	22.7	3.0	4.8	chr10	52205494	52207967	(81589455)	C	L1PA15	LINE/L1	(4101)	2684	294	445974
7267	21.3	3.0	7.5	chr10	55319441	55322013	(78475409)	+	L1PA15	LINE/L1	191	2671	(4022)	449997
869	30.5	3.9	1.0	chr10	59917977	59918274	(73879148)	+	MLT1J1	LTR/ERVL-MaLR	9	315	(129)	456290
1715	23.1	4.6	11.3	chr10	59918276	59918594	(73878828)	+	L1ME3C	LINE/L1	5221	5521	(602)	456277
19901	19.6	2.7	1.8	chr10	61518778	61520723	(72276699)	C	L1PA15	LINE/L1	(3813)	2953	991	458684
646	27.0	17.0	1.8	chr10	63518506	63518848	(70278574)	C	MER20B	DNA/hAT-Charlie	(357)	426	21	461931
271	35.4	6.2	1.9	chr10	63518891	63519080	(70278342)	+	MIR	SINE/MIR	19	220	(48)	461932
3332	16.9	6.9	3.7	chr10	67832465	67833196	(65964226)	+	L1MC4a	LINE/L1	6958	7714	(168)	467992
357	26.1	17.3	0.2	chr10	74178815	74178940	(59618482)	C	MIRc	SINE/MIR	(39)	169	24	480713
6047	26.9	4.7	4.5	chr10	84816983	84817949	(48979473)	C	L1PA15	LINE/L1	(4613)	2172	1194	497346
4361	21.2	2.1	2.8	chr10	85826594	85827622	(47969800)	+	L1PA15	LINE/L1	1206	2226	(4559)	498625
18993	15.5	2.5	3.7	chr10	91737876	91741030	(42056392)	C	L1PA15	LINE/L1	(743)	3634	448	507780
1991	16.3	2.3	0.3	chr10	93792105	93792485	(40004937)	+	Charlie5	DNA/hAT-Charlie	2234	2622	(2)	511801
3273	12.8	6.1	6.1	chr10	99777672	99778029	(34019393)	C	L1MCa	LINE/L1	(4407)	2101	1730	522095
1652	13.0	15.7	0.0	chr10	99778030	99778314	(34019108)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	522097
12	19.4	5.9	3.7	chr10	100891056	100891106	(32906316)	+	GA-rich	Low_complexity	1	54	(0)	524127
3898	10.8	6.0	2.8	chr10	102844065	102845149	(30952273)	C	MER11A	LTR/ERVK	(4)	1232	1	527695
2175	12.3	0.0	1.0	chr10	117798380	117798687	(15998735)	C	AluSz6	SINE/Alu	(7)	305	1	551090
993	18.7	9.6	2.0	chr10	117798688	117798848	(15998574)	C	MER20	DNA/hAT-Charlie	(38)	181	1	551089
438	28.8	3.6	3.0	chr10	117798907	117799071	(15998351)	C	MIRb	SINE/MIR	(21)	247	82	551091
11600	9.6	0.5	0.2	chr10	121755882	121757457	(12039965)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	557662
2364	8.8	0.7	0.0	chr10	124693191	124693487	(9103935)	+	AluSc	SINE/Alu	2	300	(9)	562316
2001	15.6	5.4	2.2	chr10	124957395	124957722	(8839700)	C	L1MB3	LINE/L1	(9)	6174	5832	562846
2132	13.0	0.0	1.0	chr10	124957723	124958029	(8839393)	C	AluSz	SINE/Alu	(8)	304	1	562847
1194	33.2	12.7	1.6	chr10	126873665	126874643	(6922779)	+	L2	LINE/L2	1916	3018	(401)	565469
12	17.7	3.1	0.0	chr10	126874851	126874882	(6922540)	+	(TGAA)n	Simple_repeat	1	33	(0)	565470
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
499	16.0	3.0	8.5	chr11	457433	457538	(134629084)	C	AluJr	SINE/Alu	(179)	133	34	573413
491	31.9	7.9	7.9	chr11	457540	457984	(134628638)	C	L1ME2	LINE/L1	(298)	5866	5422	573414
2543	6.6	1.9	0.0	chr11	912563	912867	(134173755)	+	AluY	SINE/Alu	1	311	(0)	574082
15315	12.9	1.9	2.3	chr11	3241184	3242773	(131843849)	C	MER4B-int	LTR/ERV1	(2105)	4653	3053	576760
847	28.4	1.7	3.7	chr11	3808915	3809159	(131277463)	+	MIRb	SINE/MIR	15	254	(14)	577752
447	20.8	6.7	4.6	chr11	3809313	3809443	(131277179)	C	MIR3	SINE/MIR	(14)	194	61	577753
16778	17.1	1.9	0.6	chr11	5976713	5982163	(129104459)	C	L1PA15	LINE/L1	(4)	6781	1259	580694
5220	12.1	6.7	4.2	chr11	7809979	7811114	(127275508)	C	MER11A	LTR/ERVK	(0)	1266	1	583104
18932	12.2	2.1	0.8	chr11	10056632	10060746	(125025876)	+	L1PA14	LINE/L1	1573	5842	(2299)	586986
13853	15.7	1.2	1.1	chr11	16070534	16074554	(119012068)	+	L1PA15	LINE/L1	2	4125	(2548)	596553
20337	12.7	0.7	0.5	chr11	16669404	16672375	(118414247)	+	L1PREC2	LINE/L1	1222	4206	(3949)	597287
573	24.6	12.3	11.0	chr11	20360597	20360972	(114725650)	C	MLT1J	LTR/ERVL-MaLR	(43)	469	123	603799
2328	4.2	3.7	0.3	chr11	20360975	20361313	(114725309)	+	MER11A	LTR/ERVK	1	445	(821)	603800
9835	17.8	4.7	1.6	chr11	26435186	26437660	(108648962)	C	L1PREC2	LINE/L1	(4284)	3879	2	612476
200	27.7	1.5	3.0	chr11	27507542	27507608	(107579014)	C	MIRb	SINE/MIR	(10)	258	193	614073
422	28.4	2.9	2.2	chr11	27853840	27854038	(107232584)	C	MIRc	SINE/MIR	(9)	199	2	614649
2043	16.6	0.3	1.5	chr11	31379130	31379472	(103707150)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	619893
2294	9.7	0.0	3.9	chr11	31379760	31380068	(103706554)	C	AluSx1	SINE/Alu	(14)	298	2	619894
1854	18.6	4.5	0.9	chr11	36120722	36121062	(98965560)	+	MLT1A0	LTR/ERVL-MaLR	1	354	(11)	627890
225	31.0	0.0	2.7	chr11	36121069	36121141	(98965481)	+	L2c	LINE/L2	3309	3379	(8)	627891
13148	20.7	1.5	1.9	chr11	38768065	38770607	(96316015)	+	L1PREC2	LINE/L1	13	2544	(4241)	631604
1841	6.7	2.7	1.2	chr11	47744598	47744854	(87341768)	C	L1MA1	LINE/L1	(6)	6296	6036	646634
3818	11.1	5.4	3.7	chr11	47744903	47745860	(87340762)	+	MER11A	LTR/ERVK	1	1071	(0)	646635
2572	8.0	0.0	0.0	chr11	57807324	57807635	(77278987)	+	AluSx1	SINE/Alu	1	312	(0)	654504
2378	8.2	0.3	0.3	chr11	63882302	63882594	(71204028)	+	AluSp	SINE/Alu	1	293	(20)	664596
590	8.7	0.0	3.2	chr11	63882595	63882679	(71203943)	C	U6	snRNA	(8)	99	16	664597
188	29.7	8.6	1.5	chr11	63882688	63882752	(71203870)	C	MIR	SINE/MIR	(188)	74	5	664598
4517	8.6	3.4	4.4	chr11	71701532	71702615	(63384007)	C	MER11A	LTR/ERVK	(0)	1266	1	678652
784	29.4	9.1	2.8	chr11	71702621	71703298	(63383324)	C	L2b	LINE/L2	(213)	3213	2469	678651
7786	13.9	2.6	1.6	chr11	71869522	71869897	(63216725)	C	L1PA14	LINE/L1	(4799)	1890	1519	678900
1743	13.0	11.0	2.4	chr11	71869898	71870229	(63216393)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	678902
1431	25.6	6.0	5.1	chr11	73006207	73006647	(62079975)	+	L2a	LINE/L2	2344	2791	(628)	681005
652	26.2	9.2	0.5	chr11	73006660	73006866	(62079756)	+	L2a	LINE/L2	3194	3420	(6)	681005
12159	18.6	7.0	3.3	chr11	79001216	79005978	(56080644)	+	L1PA13	LINE/L1	33	4993	(1773)	693067
452	29.9	5.8	1.8	chr11	82508549	82508715	(52577907)	C	MIRb	SINE/MIR	(71)	197	24	698965
2167	18.5	4.8	6.4	chr11	86864608	86865121	(48221501)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	706201
423	30.4	11.5	6.0	chr11	86865183	86865418	(48221204)	+	MIRb	SINE/MIR	2	268	(0)	706202
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
11316	15.4	2.1	1.4	chr11	97648633	97652864	(37433758)	C	L1PA12	LINE/L1	(2764)	5377	2	721471
1334	17.9	0.4	0.0	chr11	100800940	100801173	(34285449)	C	Tigger4a	DNA/TcMar-Tigger	(1)	235	1	725530
11018	20.3	2.6	3.3	chr11	103830887	103835725	(31250897)	+	L1PA13	LINE/L1	105	4906	(1860)	730006
2325	28.6	7.2	2.1	chr11	106114019	106114774	(28971848)	+	L2a	LINE/L2	2092	2888	(531)	733131
17902	16.1	3.0	4.0	chr11	110541936	110548535	(24538087)	+	L1PA15	LINE/L1	294	6785	(0)	740009
2226	11.3	1.0	0.0	chr11	117072107	117072415	(18014207)	+	AluSq	SINE/Alu	2	313	(0)	750467
2579	7.2	0.7	0.0	chr11	129456572	129456863	(5629759)	C	AluSz	SINE/Alu	(18)	294	1	770360
776	22.8	17.5	1.1	chr11	134014653	134014855	(1071767)	+	L1MA8	LINE/L1	5994	6234	(57)	776664
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
27	0.0	0.0	5.7	chr12	235272	235306	(133040003)	+	(GCAGGG)n	Simple_repeat	1	35	(0)	778418
6576	5.8	13.3	7.0	chr12	235374	236465	(133038844)	+	MER11A	LTR/ERVK	1	1266	(0)	778419
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
252	26.1	1.5	1.2	chr12	4213346	4213427	(129061882)	+	MIR1_Amn	SINE/MIR	74	161	(69)	785174
1078	21.2	0.4	1.3	chr12	4213470	4213703	(129061606)	+	L1MB7	LINE/L1	5952	6183	(1)	785175
349	24.4	2.3	1.1	chr12	4213709	4213795	(129061514)	C	L1ME3B	LINE/L1	(66)	6176	6089	785176
189	33.3	1.3	1.3	chr12	4412818	4412896	(128862413)	+	MER5B	DNA/hAT-Charlie	7	85	(93)	785492
426	12.7	1.4	1.4	chr12	4412940	4413011	(128862298)	+	MER5B	DNA/hAT-Charlie	105	176	(2)	785493
1909	15.4	0.7	0.3	chr12	6879347	6879639	(126395670)	+	AluSx3	SINE/Alu	1	294	(17)	789551
23	6.0	2.9	0.0	chr12	6879769	6879803	(126395506)	+	(CTG)n	Simple_repeat	1	36	(0)	789552
2280	9.6	0.0	1.0	chr12	6879825	6880125	(126395184)	+	AluSx	SINE/Alu	1	298	(14)	789553
2041	16.4	0.3	0.0	chr12	7054628	7054937	(126220372)	C	AluSz6	SINE/Alu	(0)	312	2	789873
8956	7.8	1.8	1.8	chr12	7054938	7055276	(126220033)	C	L1PA8A	LINE/L1	(4831)	3324	2995	789869
523	22.3	0.0	0.0	chr12	7055272	7055365	(126219944)	C	L1PA8A	LINE/L1	(6467)	1688	1595	789869
594	13.0	1.1	0.0	chr12	7055364	7055455	(126219854)	+	L1PREC2	LINE/L1	104	196	(7959)	789874
9566	19.1	2.1	1.6	chr12	7608306	7611092	(125664217)	+	L1PA13	LINE/L1	758	3564	(3202)	790541
1493	30.1	10.8	9.9	chr12	12207502	12208071	(121067238)	+	L1M4a2	LINE/L1	371	948	(1631)	797688
885	21.9	8.1	3.1	chr12	12208061	12208405	(121066904)	+	L1ME2	LINE/L1	5777	6159	(285)	797690
20893	10.7	2.7	0.4	chr12	16656547	16659333	(116615976)	C	L1PA13	LINE/L1	(2917)	5224	2394	804543
1434	30.3	10.9	3.3	chr12	19535478	19536183	(113739126)	C	L2	LINE/L2	(1971)	1448	682	808387
255	25.0	3.9	3.5	chr12	19536159	19536268	(113739041)	+	MIR3	SINE/MIR	38	150	(118)	808390
5525	22.1	2.6	10.5	chr12	20134720	20136951	(113138358)	C	L1PREC2	LINE/L1	(4507)	3648	6	809263
4846	11.4	8.1	7.3	chr12	22554462	22555474	(110719835)	C	MER11A	LTR/ERVK	(0)	1266	245	812297
343	6.7	0.0	0.0	chr12	22555478	22555522	(110719787)	C	MER11A	LTR/ERVK	(1221)	45	1	812297
2427	8.5	0.0	0.3	chr12	22555537	22555831	(110719478)	+	AluY	SINE/Alu	1	294	(17)	812298
1375	21.4	12.4	1.4	chr12	26043620	26044040	(107231269)	+	L1ME3	LINE/L1	5687	6160	(2)	817417
1523	20.9	0.7	2.0	chr12	29781550	29781851	(103493458)	+	AluJo	SINE/Alu	6	303	(9)	822851
10165	19.0	2.1	3.1	chr12	31215262	31217261	(102058048)	+	L1PA13	LINE/L1	352	2330	(4455)	824837
24	6.6	0.0	0.0	chr12	32139354	32139385	(101135924)	+	(TG)n	Simple_repeat	1	32	(0)	826909
286	31.5	14.4	2.6	chr12	43155342	43155494	(90119815)	C	MIRc	SINE/MIR	(25)	183	10	837685
2163	22.1	5.5	2.7	chr12	43924762	43925287	(89350022)	C	MLT1F	LTR/ERVL-MaLR	(6)	542	1	838777
7942	10.6	2.3	0.4	chr12	45162575	45164199	(88111110)	C	L1PREC2	LINE/L1	(3487)	4654	2994	840413
1000	14.1	1.2	0.0	chr12	45164194	45164356	(88110953)	C	L1PREC2	LINE/L1	(6467)	1688	1524	840413
20096	12.4	1.4	0.3	chr12	46636908	46643375	(86631934)	+	L1PA14	LINE/L1	2	7369	(772)	842517
18477	13.9	3.5	0.8	chr12	55415154	55419670	(77855639)	C	L1PA14	LINE/L1	(749)	5924	1307	857739
3814	4.8	1.7	1.2	chr12	56852742	56853102	(76422207)	+	MER11A	LTR/ERVK	1	463	(803)	860373
4987	2.6	0.0	1.5	chr12	57400016	57400603	(75874706)	+	L1PA5	LINE/L1	5576	6154	(0)	861221
23422	11.7	1.8	1.7	chr12	67489904	67495856	(65779453)	+	L1PA13	LINE/L1	1962	8155	(3)	875987
2310	17.9	0.9	5.0	chr12	74966986	74967466	(58307843)	C	L1PA15	LINE/L1	(4715)	2067	1607	886921
17506	15.9	2.5	0.6	chr12	74967466	74972003	(58303306)	+	L1PA15	LINE/L1	2178	6785	(0)	886921
217	11.9	6.7	4.5	chr12	75189529	75189572	(58085737)	C	L2b	LINE/L2	(15)	3360	3316	887205
1017	29.3	8.4	3.9	chr12	75914595	75914900	(57360409)	C	LTR82B	LTR/ERVL	(315)	515	197	888300
683	19.3	8.3	9.0	chr12	75914952	75915241	(57360068)	C	L1MC5	LINE/L1	(13)	9291	9004	888302
19953	16.3	3.1	1.8	chr12	85650690	85654865	(47620444)	C	L1PA12	LINE/L1	(2984)	5157	561	901928
555	10.6	0.0	1.2	chr12	86043700	86043785	(47231524)	C	L1P4e	LINE/L1	(4593)	2096	2012	902444
3593	27.3	3.3	6.8	chr12	86043805	86045205	(47230104)	C	L1P4e	LINE/L1	(4936)	1757	408	902444
2573	18.9	8.5	5.8	chr12	88717147	88717907	(44557402)	+	L1MB8	LINE/L1	5322	6160	(18)	905882
4748	9.2	2.9	2.8	chr12	90929320	90930361	(42344948)	C	MER11A	LTR/ERVK	(0)	1266	1	909252
8517	21.8	5.3	4.1	chr12	92977985	92979524	(40295785)	+	L1PA15	LINE/L1	293	1857	(4928)	912474
2283	9.9	0.0	0.3	chr12	92979525	92979818	(40295491)	+	AluY	SINE/Alu	3	295	(16)	912475
5467	23.7	4.9	5.9	chr12	99557059	99559236	(33716073)	C	L1PA13	LINE/L1	(4403)	2382	288	924049
15	15.0	5.4	0.0	chr12	100267546	100267582	(33007727)	+	(GGCC)n	Simple_repeat	1	39	(0)	925232
2032	19.6	1.9	4.6	chr12	103734675	103735150	(29540159)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	2	931180
14156	18.8	2.9	5.4	chr12	104997503	105000000	(28275309)	C	L1PA13	LINE/L1	(4321)	2464	32	933644
3798	10.9	7.3	2.7	chr12	106620253	106621314	(26653995)	C	MER11A	LTR/ERVK	(4)	1232	1	936519
287	31.4	7.2	2.4	chr12	106621315	106621526	(26653783)	C	L1ME3	LINE/L1	(5567)	848	626	936507
2015	22.0	6.6	2.6	chr12	107816965	107817426	(25457883)	C	MER74A	LTR/ERVL	(17)	541	60	938920
193	28.7	9.8	9.8	chr12	110404277	110404388	(22870921)	C	MIR	SINE/MIR	(30)	232	121	944650
294	23.4	1.5	0.0	chr12	110404458	110404521	(22870788)	C	MER102a	DNA/hAT-Charlie	(3)	327	263	944651
1743	10.2	13.3	5.5	chr12	112325814	112326088	(20949221)	C	AluJo	SINE/Alu	(12)	300	1	948929
2102	14.7	2.9	0.0	chr12	112326220	112326518	(20948791)	+	AluJr	SINE/Alu	1	308	(4)	948930
337	32.8	4.2	3.2	chr12	115656858	115657043	(17618266)	+	MIR3	SINE/MIR	7	194	(14)	956488
713	24.3	18.2	4.7	chr12	116243867	116244225	(17031084)	+	L3	LINE/CR1	2530	2947	(1152)	957578
4753	25.6	8.8	3.8	chr12	116244302	116244669	(17030640)	+	HAL1	LINE/L1	2	373	(2134)	957579
3018	25.2	5.4	4.3	chr12	117013906	117015417	(16259892)	C	L1MEf	LINE/L1	(4954)	1686	9	959408
3298	18.2	3.7	2.3	chr12	117015672	117017042	(16258267)	C	L1MB8	LINE/L1	(3)	6175	4749	959409
1483	14.9	0.0	10.7	chr12	118368890	118369198	(14906111)	+	AluJb	SINE/Alu	14	289	(23)	962445
2457	10.9	0.0	0.0	chr12	122916991	122917302	(10358007)	+	AluSz	SINE/Alu	1	312	(0)	972941
18671	14.6	3.6	3.5	chr12	126132927	126137235	(7138074)	C	L1PA15	LINE/L1	(2331)	4342	2	979331
12324	14.0	1.5	0.9	chr12	129203397	129205920	(4069389)	+	L1PREC2	LINE/L1	876	3415	(3258)	984660
2026	15.1	3.1	14.8	chr13	24621276	24621511	(89742817)	+	Ricksha_a	DNA/MULE-MuDR	605	774	(407)	1000537
2208	10.6	1.0	0.3	chr13	24621512	24621812	(89742516)	C	AluSq2	SINE/Alu	(10)	303	1	1000538
302	28.8	12.4	1.1	chr13	26566678	26566856	(87797472)	C	MLT1J2	LTR/ERVL-MaLR	(246)	202	1	1003477
1071	16.8	5.0	1.9	chr13	36334396	36334607	(78029721)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1018385
527	30.9	10.1	1.8	chr13	39048359	39048638	(75315690)	C	L2c	LINE/L2	(24)	3363	3058	1022090
14141	16.4	1.8	1.8	chr13	39945321	39951063	(74413265)	+	L1PA15	LINE/L1	1062	6780	(5)	1023351
796	28.9	15.9	5.5	chr13	44871730	44872587	(69491741)	+	LTR78	LTR/ERV1	19	967	(337)	1031112
4300	18.9	5.2	1.4	chr13	44872709	44873078	(69491250)	+	MER54A	LTR/ERVL	3	393	(508)	1031113
298	31.8	6.7	8.4	chr13	45011873	45012301	(69352027)	+	L1MEd	LINE/L1	12	432	(6654)	1031376
366	32.0	3.9	0.8	chr13	50336450	50336575	(64027753)	+	L3	LINE/CR1	3030	3159	(940)	1039974
388	32.7	5.3	7.4	chr13	50336597	50336827	(64027501)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	186	1039975
307	35.1	0.7	2.3	chr13	50337012	50337153	(64027175)	+	MIRc	SINE/MIR	46	186	(82)	1039976
264	33.7	7.7	5.7	chr13	50830321	50830512	(63533816)	C	L2c	LINE/L2	(4)	3383	3188	1040711
374	26.8	13.6	5.9	chr13	54147126	54147327	(60217001)	C	LTR104_Mam	LTR/Gypsy	(1238)	271	52	1045550
7612	24.6	4.5	2.4	chr13	54299074	54302069	(60062259)	C	L1M1	LINE/L1	(3392)	4170	13	1045726
5556	25.4	3.9	0.1	chr13	58238669	58239988	(56124340)	+	L1P4c	LINE/L1	5	1376	(5258)	1050503
7780	20.1	3.6	1.3	chr13	58239989	58241103	(56123225)	+	L1PA15	LINE/L1	1213	2366	(4419)	1050504
2085	14.4	0.0	0.0	chr13	62429316	62429607	(51934721)	C	AluSz	SINE/Alu	(18)	294	3	1055993
1052	18.2	1.5	0.0	chr13	62429702	62429904	(51934424)	C	MER2	DNA/TcMar-Tigger	(0)	345	140	1055994
13	17.2	3.0	0.0	chr13	63622544	63622576	(50741752)	+	(ATAAT)n	Simple_repeat	1	34	(0)	1057517
2639	32.2	15.2	1.8	chr13	63622585	63623741	(50740587)	C	L2	LINE/L2	(541)	2878	1595	1057518
347	36.9	0.5	2.5	chr13	63811934	63812133	(50552195)	+	L2	LINE/L2	2143	2338	(1081)	1057759
8897	18.4	2.0	1.2	chr13	64162174	64164766	(50199562)	C	L1PA13	LINE/L1	(3132)	3634	1021	1058191
2364	9.6	0.0	0.7	chr13	64475430	64475731	(49888597)	C	AluYk4	SINE/Alu	(11)	300	1	1058575
6236	8.1	18.6	6.4	chr13	64475732	64476684	(49887644)	+	MER11A	LTR/ERVK	152	1265	(1)	1058574
4365	8.9	2.7	7.3	chr13	65273451	65274535	(49089793)	+	MER11A	LTR/ERVK	1	1266	(0)	1059574
235	33.3	0.0	1.1	chr13	67808051	67808144	(46556184)	C	MIR3	SINE/MIR	(100)	108	16	1062746
2134	26.9	5.0	5.2	chr13	71320551	71321294	(43043034)	+	LTR41	LTR/ERVL	27	768	(0)	1067300
421	34.0	4.4	3.4	chr13	71711243	71711446	(42652882)	+	Plat_L3	LINE/CR1	3343	3548	(38)	1067814
329	40.8	7.4	4.8	chr13	71765133	71765634	(42598694)	+	L2	LINE/L2	2434	2949	(470)	1067884
373	37.5	7.2	0.5	chr13	71765666	71765858	(42598470)	C	MIRb	SINE/MIR	(34)	234	28	1067885
187	27.4	7.8	11.7	chr13	73675497	73675616	(40688712)	C	MamTip2	DNA/hAT-Tip100	(140)	165	51	1070926
310	28.5	5.1	0.8	chr13	73675833	73675963	(40688365)	C	LTR79	LTR/ERVL	(320)	207	71	1070927
186	35.9	7.3	5.7	chr13	73676048	73676277	(40688051)	C	MIRb	SINE/MIR	(21)	247	14	1070928
865	14.6	0.7	1.5	chr13	73718475	73718611	(40645717)	+	AluSz	SINE/Alu	1	136	(176)	1070978
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
2421	9.3	0.6	0.6	chr13	77292677	77292988	(37071340)	+	AluSx1	SINE/Alu	1	312	(0)	1075975
868	23.6	3.4	7.8	chr13	77292989	77293096	(37071232)	+	L1ME2	LINE/L1	6020	6125	(39)	1075971
457	37.1	9.3	2.0	chr13	77293138	77293484	(37070844)	C	L2	LINE/L2	(1859)	1560	1186	1075976
3591	11.9	7.2	3.0	chr13	78056554	78057631	(36306697)	C	MER11A	LTR/ERVK	(4)	1232	1	1077020
10643	7.4	0.5	0.5	chr13	78057632	78058996	(36305332)	C	HERVK11-int	LTR/ERVK	(0)	7953	6589	1077020
16300	20.6	3.0	1.9	chr13	79734111	79737542	(34626786)	C	L1PA15	LINE/L1	(4125)	4030	567	1079358
15	15.0	0.0	0.0	chr13	85982022	85982051	(28382277)	+	(ATTT)n	Simple_repeat	1	30	(0)	1087214
14104	19.8	1.9	2.0	chr13	87310546	87312949	(27051379)	+	ERVL-B4-int	LTR/ERVL	776	3181	(2533)	1088847
234	20.2	4.5	4.5	chr13	87931288	87931375	(26432953)	+	Arthur1	DNA/hAT-Tip100	2327	2414	(1533)	1089681
3017	23.7	2.0	4.5	chr13	89163446	89163902	(25200426)	+	L1MB8	LINE/L1	5651	6097	(81)	1091247
310	13.8	0.0	3.0	chr13	89164040	89164106	(25200222)	+	L1MB8	LINE/L1	6110	6174	(4)	1091247
14	14.2	4.5	4.3	chr13	92425259	92425302	(21939026)	+	(ATGTAA)n	Simple_repeat	1	46	(0)	1095546
440	32.7	11.5	0.9	chr13	92425388	92425597	(21938731)	C	MIR	SINE/MIR	(8)	254	20	1095547
291	28.0	8.2	3.1	chr13	92425636	92425797	(21938531)	C	HAL1ME	LINE/L1	(143)	2322	2152	1095548
18282	16.6	3.4	0.8	chr13	93172972	93178306	(21186022)	+	L1PA15	LINE/L1	1269	6732	(60)	1096541
1225	24.1	6.4	5.2	chr13	93233868	93234391	(21129937)	+	LTR55	LTR/ERVL?	16	546	(2)	1096618
238	30.6	21.9	1.5	chr13	93234394	93234599	(21129729)	C	L2a	LINE/L2	(531)	2888	2629	1096616
19	8.1	0.0	0.0	chr13	93234663	93234688	(21129640)	+	(TG)n	Simple_repeat	1	26	(0)	1096619
222	35.5	11.4	0.0	chr13	108728285	108728408	(5635920)	C	MIRb	SINE/MIR	(122)	146	7	1119177
910	26.4	4.5	2.5	chr13	108728477	108728802	(5635526)	C	MLT1C	LTR/ERVL-MaLR	(83)	384	52	1119178
7563	16.9	4.3	2.7	chr13	111100181	111101666	(3262662)	+	L1PA15	LINE/L1	3	1855	(4834)	1122160
2247	11.5	0.0	0.0	chr13	111101667	111101961	(3262367)	+	AluSz	SINE/Alu	1	295	(17)	1122161
23146	12.6	1.7	1.0	chr14	21168721	21172381	(85871337)	+	L1PREC2	LINE/L1	458	4399	(3742)	1129217
6786	14.8	1.9	2.3	chr14	25301905	25302894	(81740824)	+	L1PREC2	LINE/L1	1521	2478	(4326)	1135386
2228	12.5	0.0	0.0	chr14	31062094	31062398	(75981320)	C	AluSq2	SINE/Alu	(8)	305	1	1142839
365	27.2	2.1	6.8	chr14	31062442	31062587	(75981131)	+	Charlie4z	DNA/hAT-Charlie	4	142	(25)	1142840
4147	7.6	4.5	1.6	chr14	32804345	32805262	(74238456)	C	MER11A	LTR/ERVK	(89)	1177	1	1145618
8614	22.0	5.9	3.2	chr14	35600531	35601849	(71441869)	C	L1MDa	LINE/L1	(5161)	1472	15	1150289
4052	19.2	2.9	1.4	chr14	35601852	35602705	(71441013)	C	L1MB8	LINE/L1	(58)	6120	5254	1150293
4586	23.0	6.6	3.4	chr14	36621885	36623097	(70420621)	C	L1ME1	LINE/L1	(1291)	4855	3581	1151850
29477	13.7	0.7	1.6	chr14	39536244	39541988	(67501730)	+	L1PREC2	LINE/L1	27	5714	(2427)	1155860
395	27.1	0.0	1.2	chr14	46480172	46480257	(60563461)	C	MER2	DNA/TcMar-Tigger	(0)	345	261	1164325
12646	21.9	3.0	3.6	chr14	47564657	47566904	(59476814)	C	L1PA15	LINE/L1	(4554)	2231	14	1165740
2434	9.8	0.0	5.2	chr14	50303497	50303823	(56739895)	+	AluSx1	SINE/Alu	3	312	(0)	1169728
2337	14.6	1.2	0.0	chr14	50303960	50304302	(56739416)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	2	1169729
7625	13.9	3.8	7.2	chr14	52148687	52149776	(54893942)	C	L1PA15	LINE/L1	(1823)	4489	3373	1172522
5139	17.9	4.2	2.5	chr14	52149770	52151191	(54892527)	C	L1PA15	LINE/L1	(4922)	1767	2	1172522
2438	12.0	2.4	0.0	chr14	53915790	53916155	(53127563)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1175200
1643	18.7	0.3	4.9	chr14	53916180	53916505	(53127213)	+	AluJo	SINE/Alu	1	311	(1)	1175201
2435	8.2	1.9	0.0	chr14	53999605	53999908	(53043810)	C	AluSz	SINE/Alu	(2)	310	1	1175324
4393	20.3	9.9	3.7	chr14	55864289	55866369	(51177349)	C	L1PREC2	LINE/L1	(4620)	3535	4	1178432
15898	16.1	2.1	2.2	chr14	57774062	57776389	(49267329)	+	L1PREC2	LINE/L1	13	2341	(4444)	1181176
13	21.4	4.7	0.0	chr14	58152310	58152352	(48891366)	+	(GCCCAC)n	Simple_repeat	1	45	(0)	1181703
384	31.0	7.9	4.5	chr14	58152690	58152909	(48890809)	C	MIRb	SINE/MIR	(16)	252	25	1181704
1356	25.8	11.4	3.4	chr14	63433472	63434113	(43609605)	C	HAL1	LINE/L1	(1806)	701	2	1189218
8787	13.0	6.8	4.1	chr14	65535400	65537349	(41506369)	C	L1PREC2	LINE/L1	(3104)	3662	1677	1193332
31	7.6	0.0	0.0	chr14	65537350	65537391	(41506327)	+	(TTA)n	Simple_repeat	1	42	(0)	1193336
2353	8.7	0.7	0.0	chr14	65537400	65537686	(41506032)	C	AluY	SINE/Alu	(22)	289	1	1193337
10937	16.9	2.9	1.5	chr14	70496422	70498643	(36545075)	+	L1PA12	LINE/L1	5	2820	(4161)	1201270
17	12.4	2.9	0.0	chr14	70535172	70535206	(36508512)	+	(ATTTA)n	Simple_repeat	1	36	(0)	1201308
1470	16.6	1.5	2.5	chr14	73561977	73562185	(33481533)	+	L1MB3	LINE/L1	5829	6020	(151)	1206561
3592	11.9	7.1	3.7	chr14	73562186	73563261	(33480457)	+	MER11A	LTR/ERVK	1	1232	(4)	1206565
1670	26.8	6.5	5.4	chr14	75170352	75170964	(31872754)	+	L1MC5a	LINE/L1	1401	2022	(755)	1209860
1490	18.0	10.4	19.1	chr14	75170965	75171281	(31872437)	+	MLT1D	LTR/ERVL-MaLR	4	263	(242)	1209861
314	35.6	10.3	4.8	chr14	79249351	79249833	(27793885)	C	LTR33	LTR/ERVL	(2)	513	1	1217482
1600	20.7	0.7	1.0	chr14	79444543	79444837	(27598881)	+	AluJr	SINE/Alu	1	294	(18)	1217796
451	26.7	20.5	0.3	chr14	80539081	80539356	(26504362)	C	L2a	LINE/L2	(0)	3426	3076	1219321
4672	9.1	1.6	4.4	chr14	80539364	80540405	(26503313)	+	MER11A	LTR/ERVK	1	1266	(0)	1219322
2347	26.2	4.1	4.7	chr14	88785500	88786480	(18257238)	+	L2a	LINE/L2	2454	3426	(0)	1230955
1267	29.2	9.7	3.8	chr14	102168686	102169518	(4874200)	+	L2a	LINE/L2	2537	3422	(4)	1254395
3560	24.6	2.6	1.6	chr15	23063388	23065259	(78925930)	+	L1PA13	LINE/L1	1	1966	(4819)	1266798
465	27.8	10.1	0.0	chr15	43127883	43128033	(58863156)	C	Helitron3Na_Mam	RC/Helitron	(1)	485	318	1296435
4566	9.8	1.9	2.1	chr15	43128124	43129138	(58862051)	+	MER11A	LTR/ERVK	1	1261	(5)	1296436
218	22.9	0.0	0.0	chr15	44404660	44404707	(57586482)	+	L2a	LINE/L2	3299	3346	(80)	1298839
17971	13.3	1.9	1.3	chr15	49402267	49407536	(52583653)	C	L1PA13	LINE/L1	(1466)	5300	1	1306189
7046	17.9	1.9	1.6	chr15	49580233	49581327	(52409862)	+	L1PA13	LINE/L1	2720	3832	(4323)	1306420
572	28.2	12.7	1.7	chr15	51003014	51003244	(50987945)	C	Tigger19a	DNA/TcMar-Tigger	(1)	322	63	1308916
16087	19.8	3.2	2.4	chr15	55524461	55527519	(46463670)	C	L1PA15	LINE/L1	(3139)	5002	1912	1315726
210	25.9	0.0	1.7	chr15	55801969	55802027	(46189162)	+	MIR3	SINE/MIR	130	187	(21)	1316232
191	21.9	4.5	1.5	chr15	59302433	59302497	(42688692)	+	MIRc	SINE/MIR	82	148	(120)	1321791
189	28.2	7.6	4.5	chr15	59302636	59302724	(42688465)	+	L2a	LINE/L2	3323	3414	(12)	1321792
18	27.2	1.7	0.0	chr15	66810481	66810538	(35180651)	+	GA-rich	Low_complexity	1	59	(0)	1335496
15	5.6	0.0	0.0	chr15	66810666	66810684	(35180505)	+	(T)n	Simple_repeat	1	19	(0)	1335497
5583	5.7	0.1	0.0	chr15	66810716	66811397	(35179792)	C	L1PA6	LINE/L1	(0)	6154	5472	1335498
435	17.6	5.8	4.2	chr15	69045727	69045845	(32945344)	C	MER113	DNA/hAT-Charlie	(303)	218	98	1339509
2066	15.4	10.8	0.6	chr15	71526955	71527320	(30463869)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1343873
32	23.8	0.0	7.2	chr15	72319477	72319601	(29671588)	+	G-rich	Low_complexity	1	125	(0)	1345246
8107	24.4	4.0	3.5	chr15	76681452	76683818	(25307371)	+	L1PA13	LINE/L1	10	2498	(4287)	1352914
3103	20.0	5.5	9.9	chr15	76725415	76726124	(25265065)	+	L1MB3	LINE/L1	4562	5265	(881)	1352957
36	0.0	0.0	0.0	chr15	76726125	76726155	(25265034)	+	(AT)n	Simple_repeat	1	31	(0)	1352962
4203	16.8	5.7	2.3	chr15	76726156	76727032	(25264157)	+	L1MB3	LINE/L1	5266	6181	(2)	1352957
1434	25.2	11.3	0.8	chr15	81227183	81227931	(20763258)	C	L2a	LINE/L2	(69)	3357	2523	1360939
224	27.2	7.2	1.9	chr15	81228023	81228127	(20763062)	C	L2c	LINE/L2	(259)	3128	3018	1360940
755	35.3	6.7	3.8	chr15	83844929	83845378	(18145811)	+	L2b	LINE/L2	2912	3375	(0)	1365227
452	31.5	7.1	0.7	chr15	83845422	83845609	(18145580)	+	MIR3	SINE/MIR	1	195	(13)	1365228
653	33.8	9.6	7.0	chr15	85030577	85031053	(16960136)	+	L2c	LINE/L2	2899	3387	(0)	1367147
20065	13.0	6.2	2.1	chr15	85447378	85454630	(16536559)	C	L1PA14	LINE/L1	(9)	8147	2	1367830
1026	26.9	5.7	1.3	chr15	95451906	95452221	(6538968)	+	UCON1	Unknown	681	1011	(375)	1384469
792	26.7	8.5	5.4	chr15	99680231	99680674	(2310515)	+	L1ME4c	LINE/L1	68	526	(304)	1390456
583	27.7	10.9	0.5	chr16	818496	818709	(89519636)	+	MIR	SINE/MIR	23	261	(1)	1395243
74	20.9	0.0	7.6	chr16	818727	818962	(89519383)	+	(TGA)n	Simple_repeat	1	236	(0)	1395244
1680	20.9	10.0	0.0	chr16	1813056	1813443	(88524902)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	1396420
1752	27.7	7.1	7.0	chr16	1813471	1814192	(88524153)	+	L1ME3	LINE/L1	4383	5135	(1011)	1396421
322	27.3	4.3	0.0	chr16	1920800	1920887	(88417458)	+	L2b	LINE/L2	3267	3358	(17)	1396646
226	29.7	3.0	0.0	chr16	1920938	1921032	(88417313)	C	L2c	LINE/L2	(283)	3104	3002	1396647
1250	17.1	3.5	0.0	chr16	1921193	1921443	(88416902)	C	L1MB7	LINE/L1	(5)	6179	5920	1396648
1769	15.3	0.3	5.9	chr16	12277114	12277420	(78060925)	+	AluJr	SINE/Alu	9	298	(14)	1417606
971	18.0	0.0	1.2	chr16	12277578	12277738	(78060607)	C	AluJr	SINE/Alu	(17)	295	137	1417607
407	35.1	8.0	0.4	chr16	15972000	15972242	(74366103)	C	MIRb	SINE/MIR	(3)	265	3	1425737
339	29.2	2.7	6.3	chr16	15972461	15972724	(74365621)	C	MLT1J	LTR/ERVL-MaLR	(217)	393	43	1425738
1652	18.0	1.4	2.7	chr16	15972776	15973093	(74365252)	C	AluJb	SINE/Alu	(0)	312	2	1425739
2187	12.2	0.7	0.0	chr16	19214790	19215085	(71123260)	C	AluSx1	SINE/Alu	(12)	300	3	1432999
368	21.9	9.2	9.2	chr16	19215086	19215193	(71123152)	C	MamTip1	DNA/hAT-Tip100	(86)	181	73	1432998
15	12.0	0.0	0.0	chr16	21301852	21301878	(69036467)	+	(GCG)n	Simple_repeat	1	27	(0)	1437616
18819	14.9	3.7	1.2	chr16	25483165	25489717	(64848628)	C	L1PA15	LINE/L1	(3)	6782	25	1447116
1822	15.8	1.7	2.7	chr16	28885884	28886175	(61452170)	+	AluJr	SINE/Alu	1	289	(23)	1454652
1101	15.6	0.0	0.0	chr16	28886183	28886336	(61452009)	+	AluJr	SINE/Alu	129	282	(30)	1454653
2488	7.0	0.0	0.0	chr16	30440932	30441231	(59897114)	C	AluY	SINE/Alu	(10)	301	2	1458045
1748	13.4	2.9	4.2	chr16	30441232	30441515	(59896830)	C	AluJb	SINE/Alu	(17)	295	16	1458046
301	27.2	22.4	5.9	chr16	30441516	30441582	(59896763)	C	HAL1	LINE/L1	(1348)	1159	1094	1458038
808	18.9	0.0	1.1	chr16	31886106	31886282	(58452063)	C	L1MA9	LINE/L1	(31)	7700	7526	1460906
1902	17.3	0.0	2.5	chr16	31886302	31886616	(58451729)	+	MER1B	DNA/hAT-Charlie	32	338	(1)	1460907
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
46	2.3	0.0	0.0	chr16	54211869	54211912	(36126433)	+	(AC)n	Simple_repeat	1	44	(0)	1479079
2144	11.4	2.3	0.3	chr16	57253903	57254199	(33084146)	C	AluSq2	SINE/Alu	(9)	304	2	1484647
6472	23.9	2.0	2.3	chr16	63835011	63837345	(26501000)	+	L1PA15	LINE/L1	16	2729	(4056)	1495430
2303	10.4	0.3	0.3	chr16	67378233	67378539	(22959806)	C	AluSx	SINE/Alu	(5)	307	1	1501540
298	23.3	18.9	1.7	chr16	67378980	67379097	(22959248)	C	L1ME4a	LINE/L1	(5)	6119	5977	1501541
9320	16.9	2.4	1.6	chr16	72330688	72333335	(18005010)	C	L1PA13	LINE/L1	(3175)	3591	950	1511307
16	9.6	0.0	0.0	chr16	76955118	76955140	(13383205)	+	(CT)n	Simple_repeat	1	23	(0)	1519058
23	7.2	0.0	0.0	chr16	76955169	76955198	(13383147)	+	(A)n	Simple_repeat	1	30	(0)	1519059
1030	21.0	23.4	1.4	chr17	3041885	3042246	(80215195)	+	MER31B	LTR/ERV1	1	466	(0)	1550486
13	16.1	0.0	0.0	chr17	3137024	3137051	(80120390)	+	(TATC)n	Simple_repeat	1	28	(0)	1550617
275	31.7	5.2	1.2	chr17	3137060	3137225	(80120216)	C	L1ME3F	LINE/L1	(86)	6157	5985	1550618
1985	10.8	8.1	0.0	chr17	6861894	6862042	(76395399)	C	AluSg7	SINE/Alu	(24)	285	137	1557830
47	0.0	0.0	0.0	chr17	6862043	6862082	(76395359)	+	(GT)n	Simple_repeat	1	40	(0)	1557831
1985	10.8	8.1	0.0	chr17	6862083	6862192	(76395249)	C	AluSg7	SINE/Alu	(191)	118	3	1557830
8115	23.0	6.5	6.2	chr17	6862193	6863524	(76393917)	C	L1PA15	LINE/L1	(4940)	1846	496	1557828
1574	21.2	5.5	0.3	chr17	7811478	7811823	(75445618)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1559577
951	30.3	9.1	7.2	chr17	13931031	13931624	(69325817)	+	MLT1L	LTR/ERVL-MaLR	1	606	(4)	1570607
298	25.2	14.8	0.9	chr17	16169580	16169695	(67087746)	+	MIRc	SINE/MIR	17	151	(117)	1574329
1052	28.5	8.3	1.0	chr17	20806034	20806444	(62450997)	C	LTR33	LTR/ERVL	(63)	452	9	1583142
184	26.2	0.0	0.0	chr17	20806451	20806492	(62450949)	+	L2a	LINE/L2	3350	3391	(35)	1583139
4769	16.0	2.3	5.5	chr17	20806508	20806618	(62450823)	C	L1MB8	LINE/L1	(5)	6173	6064	1583143
2043	8.9	7.6	0.0	chr17	20806619	20806898	(62450543)	C	AluSp	SINE/Alu	(10)	303	1	1583144
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1519	21.0	3.2	17.2	chr17	27364997	27365542	(55891899)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1586633
15330	15.2	4.8	2.7	chr17	31129729	31131601	(52125840)	C	L1PA13	LINE/L1	(4831)	1954	1	1594063
16	0.0	0.0	0.0	chr17	32299047	32299063	(50958378)	+	(T)n	Simple_repeat	1	17	(0)	1596496
1124	24.1	6.2	3.9	chr17	36999556	37000000	(46257441)	C	L2a	LINE/L2	(60)	3366	2882	1605072
2369	23.3	3.3	12.3	chr17	37000008	37000853	(46256588)	C	L2	LINE/L2	(552)	2867	2101	1605074
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
43	0.0	0.0	0.0	chr17	44599113	44599151	(38658290)	+	(TTTA)n	Simple_repeat	1	39	(0)	1620292
836	16.9	5.6	7.6	chr17	44599152	44599185	(38658256)	+	MER96B	DNA/hAT-Tip100	194	234	(183)	1620290
226	32.8	0.0	0.0	chr17	44599379	44599445	(38657996)	+	L2a	LINE/L2	3360	3426	(0)	1620293
12	13.9	9.8	3.6	chr17	44599684	44599734	(38657707)	+	GA-rich	Low_complexity	1	56	(0)	1620294
17323	20.5	3.0	2.3	chr17	53253819	53258904	(29998537)	+	L1PA15	LINE/L1	810	6067	(1498)	1636499
971	17.7	6.5	0.0	chr17	54580888	54581073	(28676368)	+	L1PREC2	LINE/L1	15	213	(7942)	1638278
18801	13.1	2.1	2.1	chr17	54581075	54582481	(28674960)	+	L1PREC2	LINE/L1	3025	4437	(3704)	1638278
1172	23.4	8.5	6.2	chr17	60949790	60950272	(22307169)	+	L1MC5a	LINE/L1	2159	2653	(124)	1650298
631	25.7	4.5	0.5	chr17	60950277	60950491	(22306950)	+	L1MC5a	LINE/L1	2297	2520	(257)	1650303
483	16.1	12.0	0.0	chr17	60950499	60950579	(22306862)	C	AluJo	SINE/Alu	(189)	123	32	1650304
620	26.9	4.7	1.6	chr17	60950602	60950847	(22306594)	+	L1MC5a	LINE/L1	2522	2775	(2)	1650303
1773	14.0	4.5	0.4	chr17	62353085	62353362	(20904079)	+	AluJo	SINE/Alu	1	290	(22)	1652787
1451	21.2	5.3	1.4	chr17	62505232	62505407	(20752034)	C	AluJr	SINE/Alu	(4)	308	137	1653149
27	0.0	0.0	0.0	chr17	62505408	62505433	(20752008)	+	(T)n	Simple_repeat	1	26	(0)	1653150
1451	21.2	5.3	1.4	chr17	62505434	62505544	(20751897)	C	AluJr	SINE/Alu	(177)	135	9	1653149
22	22.7	0.0	0.0	chr17	62505564	62505609	(20751832)	+	(T)n	Simple_repeat	1	46	(0)	1653151
197	22.9	19.7	1.2	chr17	64337303	64337432	(18920009)	+	MIRc	SINE/MIR	10	167	(41)	1656357
347	29.2	5.8	7.8	chr17	64337491	64337631	(18919810)	C	MIR3	SINE/MIR	(48)	160	23	1656358
1903	15.7	0.0	0.3	chr17	64420509	64420794	(18836647)	+	AluJb	SINE/Alu	1	285	(27)	1656551
239	35.4	10.6	0.0	chr17	64962288	64962431	(18295010)	+	L2a	LINE/L2	2309	2469	(950)	1657677
701	25.6	3.0	3.0	chr17	64962432	64962668	(18294773)	+	L2a	LINE/L2	2585	2821	(598)	1657677
449	31.1	15.1	3.4	chr17	64962716	64962752	(18294689)	+	L2a	LINE/L2	2957	2993	(433)	1657677
2526	7.4	0.0	0.0	chr17	64962753	64963051	(18294390)	C	AluSc8	SINE/Alu	(12)	299	1	1657678
533	28.7	3.8	11.2	chr17	65099968	65100226	(18157215)	C	MIR	SINE/MIR	(15)	247	9	1657969
314	10.0	9.1	0.0	chr17	65100357	65100416	(18157025)	+	MADE1	DNA/TcMar-Mariner	1	66	(14)	1657970
50	23.1	0.8	0.8	chr17	65100533	65100655	(18156786)	+	(TCC)n	Simple_repeat	1	124	(0)	1657971
234	21.8	3.7	1.3	chr17	67282066	67282144	(15975297)	+	Tigger14a	DNA/TcMar-Tigger	204	284	(40)	1661685
1815	11.5	0.4	0.4	chr17	67282462	67282704	(15974737)	C	AluSx1	SINE/Alu	(21)	291	49	1661686
3477	23.1	3.5	12.2	chr17	68729862	68730266	(14527175)	C	MER54B	LTR/ERVL	(498)	403	1	1664706
1952	14.6	1.3	2.3	chr17	69384738	69385038	(13872403)	C	AluSp	SINE/Alu	(15)	298	1	1665666
2247	11.0	0.0	4.3	chr17	69385206	69385531	(13871910)	+	AluSz	SINE/Alu	1	312	(0)	1665667
290	27.9	0.0	2.3	chr17	70425328	70425415	(12832026)	+	MER94	DNA/hAT-Blackjack	41	126	(8)	1667288
30	0.0	0.0	0.0	chr17	70425671	70425696	(12831745)	+	(AC)n	Simple_repeat	1	26	(0)	1667289
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
3656	5.2	3.3	1.5	chr18	9502232	9502511	(70870774)	+	MER11A	LTR/ERVK	1	388	(878)	1703162
2459	7.6	0.0	1.6	chr18	9502512	9502825	(70870460)	+	AluY	SINE/Alu	1	309	(2)	1703163
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
2157	14.0	0.0	1.0	chr18	22053399	22053712	(58319573)	+	AluSx1	SINE/Alu	1	311	(1)	1713838
2133	23.8	9.0	7.2	chr18	22053713	22053841	(58319444)	C	MLT1H-int	LTR/ERVL-MaLR	(232)	1177	1048	1713834
2084	9.9	2.0	1.4	chr18	22053842	22054133	(58319152)	C	AluSq2	SINE/Alu	(18)	295	2	1713839
500	29.1	5.6	7.8	chr18	22525493	22525749	(57847536)	+	MIRc	SINE/MIR	6	256	(12)	1714675
389	36.9	11.6	5.1	chr18	24907235	24907885	(55465400)	+	L2b	LINE/L2	2648	3343	(32)	1718660
667	29.1	3.2	2.2	chr18	25107615	25107888	(55265397)	+	Charlie2a	DNA/hAT-Charlie	12	288	(2573)	1718944
295	24.8	1.8	1.8	chr18	25107893	25108003	(55265282)	+	Charlie2b	DNA/hAT-Charlie	552	662	(2120)	1718945
840	28.7	10.6	5.5	chr18	25299862	25300368	(55072917)	+	MLT1G1	LTR/ERVL-MaLR	2	489	(0)	1719148
13682	24.6	2.2	1.6	chr18	29671114	29674497	(50698788)	+	L1PREC2	LINE/L1	561	3949	(4206)	1725344
20433	14.7	1.7	0.6	chr18	34243376	34247039	(46126246)	C	L1PREC2	LINE/L1	(2068)	4698	989	1731681
3277	12.6	0.4	0.8	chr18	47161639	47162126	(33211159)	C	MER1A	DNA/hAT-Charlie	(0)	529	44	1749776
2365	8.8	0.0	0.0	chr18	48373680	48373973	(31999312)	+	AluY	SINE/Alu	1	294	(17)	1751798
2572	13.5	2.3	4.2	chr18	48373974	48374215	(31999070)	+	MSTB	LTR/ERVL-MaLR	190	426	(0)	1751797
20537	16.4	4.3	1.6	chr18	74089176	74093556	(6279729)	C	L1PA15	LINE/L1	(1731)	5035	498	1789442
339	29.7	5.1	5.1	chr18	74995297	74995452	(5377833)	C	L2a	LINE/L2	(621)	2798	2643	1790522
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
1856	12.2	0.7	7.2	chr19	668387	668556	(57949060)	+	AluSz	SINE/Alu	135	298	(14)	1797329
3848	9.7	4.1	2.0	chr19	668599	669599	(57948017)	+	MER11A	LTR/ERVK	1	1266	(0)	1797331
191	30.0	0.0	0.0	chr19	3036691	3036740	(55580876)	+	MIR3	SINE/MIR	110	159	(49)	1802228
1856	11.8	4.6	0.3	chr19	9781133	9781421	(48836195)	C	AluSz	SINE/Alu	(6)	306	5	1818093
35	0.0	0.0	0.0	chr19	11092203	11092234	(47525382)	+	(TTA)n	Simple_repeat	1	32	(0)	1821405
2015	12.5	0.0	7.9	chr19	40638888	40639215	(17978401)	+	AluSz	SINE/Alu	1	302	(10)	1871583
913	28.1	9.7	7.2	chr19	40639216	40639425	(17978191)	+	L2a	LINE/L2	2639	2862	(557)	1871572
1448	15.2	11.6	0.7	chr19	40639426	40639694	(17977922)	C	AluJb	SINE/Alu	(10)	302	1	1871584
185	13.2	5.0	0.0	chr19	40900243	40900280	(17717336)	C	MIR	SINE/MIR	(76)	186	147	1872188
3437	10.8	1.8	4.1	chr19	40919245	40920296	(17697320)	+	MER11A	LTR/ERVK	133	1266	(0)	1872233
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
817	24.5	4.4	0.0	chr19	45300480	45300675	(13316941)	C	MER58A	DNA/hAT-Charlie	(8)	216	12	1880944
688	24.1	6.9	0.3	chr19	45300687	45300945	(13316671)	C	MLT1K	LTR/ERVL-MaLR	(273)	322	114	1880945
7408	19.6	1.5	3.5	chr19	46137703	46139323	(12478293)	C	L1P4e	LINE/L1	(4724)	2061	496	1883000
16158	13.1	2.0	0.7	chr19	46161438	46164532	(12453084)	C	L1PA12	LINE/L1	(3609)	4532	1357	1883038
2286	11.2	0.0	1.0	chr19	51381715	51382027	(7235589)	C	AluY	SINE/Alu	(1)	310	1	1895506
1047	31.7	6.0	9.0	chr19	51382028	51382237	(7235379)	+	MER21C	LTR/ERVL	638	842	(96)	1895504
17	25.4	2.6	4.5	chr19	51382282	51382358	(7235258)	+	G-rich	Low_complexity	1	75	(0)	1895507
1495	27.8	1.2	1.9	chr19	51905172	51905603	(6712013)	C	MER57F	LTR/ERV1	(6)	429	1	1896458
1399	6.2	0.3	1.3	chr19	52056401	52056622	(6560994)	+	MER11A	LTR/ERVK	1	319	(947)	1896703
2199	8.0	1.8	6.4	chr19	52056658	52057003	(6560613)	+	MER11A	LTR/ERVK	937	1266	(0)	1896703
1893	12.8	1.5	0.0	chr19	57287747	57288012	(1329604)	+	AluSx1	SINE/Alu	37	306	(6)	1907570
378	32.7	4.3	6.7	chr19	57288147	57288212	(1329404)	C	MIRb	SINE/MIR	(10)	258	204	1907571
1709	16.0	3.5	1.4	chr19	57288213	57288494	(1329122)	C	AluJr4	SINE/Alu	(24)	288	1	1907572
7791	22.9	3.6	3.0	chr19	57759267	57760959	(856657)	+	L1PA13	LINE/L1	270	1974	(4811)	1908269
3563	8.8	2.5	4.5	chr2	3514825	3515899	(238677630)	+	MER11A	LTR/ERVK	1	1266	(0)	1914564
23237	15.9	2.5	3.6	chr2	6042933	6051322	(236142207)	+	L1PREC2	LINE/L1	11	8155	(0)	1917954
641	30.0	8.1	5.4	chr2	10676017	10676612	(231516917)	+	L1ME3G	LINE/L1	140	673	(251)	1925209
2331	11.2	0.0	0.0	chr2	10676633	10676937	(231516592)	C	AluSx	SINE/Alu	(7)	305	1	1925210
838	26.8	3.8	5.3	chr2	15400744	15401271	(226792258)	C	L1MC5a	LINE/L1	(506)	2271	2048	1932651
19	19.8	5.5	1.7	chr2	15401380	15401434	(226792095)	+	GA-rich	Low_complexity	1	58	(0)	1932652
289	29.3	0.0	1.3	chr2	15401444	15401519	(226792010)	C	MIR3	SINE/MIR	(49)	159	85	1932653
258	22.8	7.1	7.1	chr2	18435864	18435962	(223757567)	C	MIR1_Amn	SINE/MIR	(105)	125	27	1937455
18781	13.5	1.0	1.1	chr2	24103955	24106313	(218087216)	+	L1PREC2	LINE/L1	2	2365	(4324)	1945514
387	32.1	0.0	1.9	chr2	27771066	27771173	(214422356)	+	MIRb	SINE/MIR	22	127	(141)	1952465
224	25.0	10.6	0.0	chr2	27771175	27771258	(214422271)	C	L2a	LINE/L2	(21)	3405	3312	1952466
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
8233	19.2	4.0	0.9	chr2	32975622	32976418	(209217111)	C	L1PA15	LINE/L1	(4738)	2047	1213	1961272
310	33.8	11.7	4.1	chr2	37196705	37197019	(204996510)	C	L1M4b	LINE/L1	(6274)	593	252	1967324
2361	9.5	0.0	0.3	chr2	47240354	47240648	(194952881)	C	AluSq	SINE/Alu	(19)	294	1	1983606
293	10.3	0.0	0.0	chr2	48470945	48470983	(193722546)	+	FRAM	SINE/Alu	63	101	(75)	1986026
14989	21.8	1.6	2.0	chr2	55824451	55827349	(186366180)	+	L1PA15	LINE/L1	646	3496	(4659)	1996644
49	0.0	0.0	0.0	chr2	58081858	58081899	(184111630)	+	(GT)n	Simple_repeat	1	42	(0)	1999343
1652	22.4	9.0	5.6	chr2	64787320	64787802	(177405727)	+	MLT1D	LTR/ERVL-MaLR	5	505	(0)	2009931
514	23.1	9.7	0.0	chr2	64787809	64787929	(177405600)	+	MLT1J	LTR/ERVL-MaLR	62	195	(317)	2009932
234	16.0	0.0	7.4	chr2	64787972	64788025	(177405504)	C	MLT1A	LTR/ERVL-MaLR	(17)	450	401	2009933
2974	11.4	3.3	0.2	chr2	64788035	64788474	(177405055)	C	L1PA16	LINE/L1	(4)	6162	5709	2009934
28037	2.6	0.2	0.1	chr2	66391131	66397150	(175796379)	+	L1PA2	LINE/L1	125	6155	(0)	2012735
1891	17.3	1.0	0.0	chr2	66524280	66524579	(175668950)	+	AluJo	SINE/Alu	1	303	(9)	2012863
779	18.9	7.8	16.7	chr2	68102929	68103239	(174090290)	C	MLT1B	LTR/ERVL-MaLR	(186)	281	1	2015042
181	22.0	2.0	5.7	chr2	68103399	68103451	(174090078)	C	L3	LINE/CR1	(3864)	235	185	2015043
11	20.7	5.1	0.0	chr2	68103523	68103561	(174089968)	+	A-rich	Low_complexity	1	41	(0)	2015044
436	33.5	11.4	0.0	chr2	68872069	68872262	(173321267)	C	MIRb	SINE/MIR	(8)	260	42	2016203
12	25.9	0.0	2.3	chr2	69742591	69742633	(172450896)	+	(CTTTCTC)n	Simple_repeat	1	43	(0)	2017656
7974	23.4	2.2	2.0	chr2	69796455	69798802	(172394727)	C	HUERS-P3-int	LTR/ERV1	(4805)	2383	30	2017771
358	27.4	14.3	1.6	chr2	70090417	70090610	(172102919)	+	MIR	SINE/MIR	20	267	(1)	2018351
334	28.5	3.7	3.7	chr2	70291111	70291245	(171902284)	C	MIRb	SINE/MIR	(61)	207	73	2018815
614	20.0	2.1	5.4	chr2	70291431	70291578	(171901951)	C	MER20	DNA/hAT-Charlie	(0)	219	77	2018816
6527	19.7	3.2	0.4	chr2	75821282	75823159	(166370370)	+	L1PA15	LINE/L1	3	1806	(4883)	2027574
252	12.9	6.2	0.0	chr2	75823160	75823658	(166369871)	+	(TA)n	Simple_repeat	1	530	(0)	2027575
17	12.3	2.7	2.6	chr2	85354466	85354502	(156839027)	+	(CAG)n	Simple_repeat	1	38	(0)	2040586
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
1883	15.2	1.3	2.9	chr2	96628370	96628678	(145564851)	+	AluJb	SINE/Alu	2	305	(7)	2052465
240	30.2	6.5	5.4	chr2	96628679	96628728	(145564801)	+	MamRep605	LTR?	597	644	(205)	2052464
2468	9.0	4.9	3.6	chr2	98669169	98669527	(143524002)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2055297
684	29.8	10.1	5.5	chr2	98669732	98670079	(143523450)	+	MLT1I	LTR/ERVL-MaLR	46	411	(0)	2055300
21055	11.6	1.6	1.0	chr2	98963168	98967714	(143225815)	C	L1PREC2	LINE/L1	(1486)	5280	701	2055731
2495	8.9	0.0	0.0	chr2	99727560	99727861	(142465668)	C	AluSx1	SINE/Alu	(10)	302	1	2056906
17	16.7	0.0	4.5	chr2	100034358	100034401	(142159128)	+	A-rich	Low_complexity	1	44	(0)	2057303
19894	16.7	2.4	1.4	chr2	103715761	103722244	(138471285)	+	L1PREC2	LINE/L1	525	7654	(501)	2062644
2212	9.5	4.2	0.7	chr2	104557332	104557627	(137635902)	+	AluSx4	SINE/Alu	1	307	(3)	2063680
274	30.6	6.9	0.8	chr2	104557828	104557946	(137635583)	C	MIRc	SINE/MIR	(104)	126	2	2063681
227	22.7	5.0	1.2	chr2	105475266	105475387	(136718142)	C	MIR3	SINE/MIR	(72)	196	71	2065007
2077	22.4	3.9	5.7	chr2	108393270	108393658	(133799871)	+	L1M4c	LINE/L1	1870	2254	(4536)	2069179
4224	11.3	6.3	2.3	chr2	108393697	108394474	(133799055)	C	MER4-int	LTR/ERV1	(1951)	4647	3837	2069181
11613	11.2	0.8	1.8	chr2	112221556	112222452	(129971077)	C	L1PA14	LINE/L1	(4707)	1982	1092	2074736
2128	22.3	5.8	2.8	chr2	113353561	113354091	(128839438)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	1	2076666
3627	12.7	6.5	3.7	chr2	119054486	119055586	(123137943)	C	MER11A	LTR/ERVK	(4)	1232	1	2084627
640	22.4	3.4	3.2	chr2	119055587	119055847	(123137682)	C	MLT1G	LTR/ERVL-MaLR	(137)	411	188	2084628
909	25.4	10.2	2.2	chr2	119333240	119333553	(122859976)	+	L1MC4	LINE/L1	7109	7450	(592)	2085145
358	25.7	0.9	10.3	chr2	119333555	119333680	(122859849)	C	MER58B	DNA/hAT-Charlie	(4)	337	224	2085146
681	21.6	3.9	3.0	chr2	119333721	119333924	(122859605)	+	L1MC4	LINE/L1	7439	7640	(242)	2085145
365	36.3	6.0	2.9	chr2	119681889	119682098	(122511431)	+	MIRb	SINE/MIR	24	240	(28)	2085751
975	15.8	2.5	0.0	chr2	119682127	119682284	(122511245)	C	FRAM	SINE/Alu	(14)	162	1	2085752
227	12.5	4.8	0.0	chr2	119682520	119682559	(122510970)	C	LTR33	LTR/ERVL	(0)	515	474	2085753
1611	6.3	0.0	0.0	chr2	120317710	120317898	(121875631)	C	AluSx1	SINE/Alu	(122)	190	2	2086764
22289	11.6	2.8	1.4	chr2	121546323	121549723	(120643806)	+	L1PA14	LINE/L1	1	4762	(3379)	2088847
315	32.3	4.7	1.8	chr2	121645216	121645379	(120548150)	+	L3	LINE/CR1	3756	3924	(175)	2089024
191	26.0	16.7	0.0	chr2	126643699	126643798	(115549731)	+	MIRb	SINE/MIR	34	153	(115)	2096185
568	34.0	13.6	4.1	chr2	136666013	136667134	(105526395)	+	L2b	LINE/L2	1632	2876	(543)	2111063
363	21.6	4.5	1.2	chr2	140386216	140386340	(101807189)	+	AluSx	SINE/Alu	52	184	(118)	2116059
3729	11.6	7.5	3.7	chr2	140414533	140415605	(101777924)	+	MER11A	LTR/ERVK	3	1232	(4)	2116094
1849	26.2	5.6	3.0	chr2	149126686	149127298	(93066231)	C	L1MEd	LINE/L1	(5796)	1307	696	2127642
17641	16.6	3.0	2.6	chr2	153784569	153790980	(88402549)	+	L1PREC2	LINE/L1	349	6515	(1626)	2134103
19361	14.7	5.0	1.4	chr2	153907401	153913916	(88279613)	C	L1PREC2	LINE/L1	(2)	6778	13	2134271
7487	14.8	0.7	0.9	chr2	156732143	156733326	(85460203)	+	ERVL-int	LTR/ERVL	4569	5749	(8)	2137855
31	3.1	0.0	0.0	chr2	160372343	160372375	(81821154)	+	(CCA)n	Simple_repeat	1	33	(0)	2142976
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
10984	13.8	1.8	2.8	chr2	164347139	164348978	(77844551)	C	L1PA12	LINE/L1	(4473)	3117	1296	2148180
2615	17.4	8.3	9.4	chr2	174977265	174977802	(67215727)	C	Looper	DNA/PiggyBac	(816)	741	162	2164104
631	10.1	1.1	0.0	chr2	174977803	174977891	(67215638)	+	HY4	scRNA	1	90	(3)	2164110
2615	17.4	8.3	9.4	chr2	174977892	174978095	(67215434)	C	Looper	DNA/PiggyBac	(1396)	161	8	2164104
2487	17.2	1.6	6.8	chr2	175196039	175196569	(66996960)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	2164447
13969	15.7	3.8	2.4	chr2	175646093	175649831	(66543698)	+	L1PREC2	LINE/L1	10	3807	(2959)	2165065
2591	7.3	1.0	0.0	chr2	177244725	177245026	(64948503)	+	AluY	SINE/Alu	1	305	(6)	2167331
374	31.5	2.7	0.0	chr2	177245237	177245344	(64948185)	C	MIR3	SINE/MIR	(11)	197	87	2167332
629	31.8	3.2	4.0	chr2	177245507	177245615	(64947914)	C	MIRc	SINE/MIR	(7)	261	152	2167333
595	33.7	13.2	6.5	chr2	181047299	181048066	(61145463)	+	L2a	LINE/L2	2255	3081	(338)	2172246
277	30.2	1.9	1.9	chr2	182915585	182915692	(59277837)	+	X6A_LINE	LINE/CR1	969	1076	(4)	2174620
16	21.3	4.1	5.3	chr2	182916056	182916128	(59277401)	+	(TCCTC)n	Simple_repeat	1	76	(0)	2174621
20	0.0	0.0	0.0	chr2	182916170	182916191	(59277338)	+	(A)n	Simple_repeat	1	22	(0)	2174622
585	32.6	11.7	5.2	chr2	186179739	186180238	(56013291)	+	L2c	LINE/L2	2469	3018	(401)	2178718
1727	23.0	4.3	2.4	chr2	186180239	186180692	(56012837)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	3	2178719
288	5.4	2.6	0.0	chr2	186849699	186849735	(55343794)	+	AluYa5	SINE/Alu	143	180	(131)	2179611
46	0.0	2.1	2.1	chr2	186849757	186849803	(55343726)	+	(TC)n	Simple_repeat	1	48	(0)	2179612
10650	22.8	2.2	2.4	chr2	188102406	188104740	(54088789)	+	L1PA15	LINE/L1	2	2332	(4453)	2181212
289	15.6	9.9	0.0	chr2	190179770	190179833	(52013696)	+	MIR3	SINE/MIR	112	182	(26)	2183962
3467	8.0	5.9	0.9	chr2	196817535	196818200	(45375329)	C	MER11A	LTR/ERVK	(485)	751	1	2192944
15	19.9	0.0	0.0	chr2	199913636	199913664	(42279865)	+	A-rich	Low_complexity	1	29	(0)	2197525
482	25.2	10.1	3.8	chr2	199913922	199914078	(42279451)	+	MIR	SINE/MIR	32	199	(63)	2197526
19118	15.9	2.2	1.6	chr2	200054406	200061787	(42131742)	+	L1PA15	LINE/L1	605	8141	(19)	2197755
855	21.8	1.1	0.6	chr2	201655376	201655550	(40537979)	+	MER45A	DNA/hAT-Tip100	1	176	(2)	2200376
2424	10.6	1.0	0.0	chr2	202861605	202861905	(39331624)	+	AluSz	SINE/Alu	1	304	(8)	2202816
3513	23.1	6.4	9.0	chr2	202861906	202862158	(39331371)	+	L1MEc	LINE/L1	2767	2997	(3322)	2202812
329	24.6	7.2	3.4	chr2	205284437	205284583	(36908946)	C	MER135	DNA	(67)	161	9	2206726
773	33.3	12.0	1.0	chr2	207317963	207318462	(34875067)	C	L2b	LINE/L2	(19)	3356	2788	2209836
1334	28.2	6.1	5.2	chr2	214481119	214481623	(27711906)	+	MLT1H	LTR/ERVL-MaLR	40	549	(0)	2219617
19	15.1	3.6	3.5	chr2	224190929	224190983	(18002546)	+	A-rich	Low_complexity	1	57	(0)	2235529
60	24.1	3.4	3.3	chr2	227909306	227909513	(14284016)	+	(TA)n	Simple_repeat	1	215	(0)	2241346
2154	20.9	7.0	0.7	chr2	227909514	227909956	(14283573)	C	MLT2B3	LTR/ERVL	(81)	473	1	2241347
480	30.5	13.6	1.0	chr2	237666020	237666211	(4527318)	+	MIRb	SINE/MIR	29	248	(20)	2256687
1560	25.6	10.3	8.9	chr2	241025372	241026003	(1167526)	C	L1MA9	LINE/L1	(4294)	1948	1321	2260585
205	27.9	0.0	9.3	chr20	10511454	10511528	(53932639)	C	L3	LINE/CR1	(196)	3903	3836	2280668
209	30.7	0.0	0.0	chr20	10511605	10511679	(53932488)	C	MIR	SINE/MIR	(59)	203	129	2280669
3232	17.8	3.6	1.1	chr20	10959021	10959725	(53484442)	C	L1MC4a	LINE/L1	(15)	7867	7145	2281322
354	22.6	0.0	0.0	chr20	10959739	10959831	(53484336)	C	L1MC4	LINE/L1	(786)	7256	7164	2281321
1353	18.1	0.0	0.5	chr20	17971814	17972034	(46472133)	C	AluJr	SINE/Alu	(90)	222	3	2291821
18	23.9	2.2	0.0	chr20	20408751	20408795	(44035372)	+	(AT)n	Simple_repeat	1	46	(0)	2295581
1238	27.0	13.2	8.9	chr20	23410704	23411455	(41032712)	+	L1MC4	LINE/L1	780	1622	(4593)	2299674
1084	22.1	16.9	1.1	chr20	23411494	23412034	(41032133)	+	L1MC4	LINE/L1	1731	2374	(3841)	2299674
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
364	27.4	20.3	1.4	chr20	35173951	35174161	(29270006)	+	MIR	SINE/MIR	2	262	(0)	2314699
180	25.0	0.0	0.0	chr20	35174194	35174229	(29269938)	C	L2c	LINE/L2	(565)	2854	2819	2314697
1021	16.9	0.0	1.1	chr20	35212300	35212479	(29231688)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	2314785
264	28.6	2.3	2.3	chr20	35212481	35212566	(29231601)	C	L2b	LINE/L2	(652)	2767	2682	2314784
1163	27.8	5.1	5.3	chr20	35212617	35213048	(29231119)	C	L1ME4b	LINE/L1	(343)	549	123	2314786
8558	17.1	1.1	1.5	chr20	45164640	45167474	(19276693)	+	L1PA15	LINE/L1	1285	4105	(2661)	2335123
2192	12.5	0.0	0.0	chr20	47537883	47538177	(16905990)	C	AluSx1	SINE/Alu	(15)	297	3	2340368
2076	10.8	3.0	2.7	chr20	47538547	47538843	(16905324)	C	AluSg	SINE/Alu	(12)	298	1	2340369
1027	30.5	11.6	1.7	chr20	51380911	51381501	(13062666)	C	L2	LINE/L2	(340)	3079	2423	2349037
2047	11.7	2.0	0.7	chr20	54220226	54220524	(10223643)	C	AluSc5	SINE/Alu	(6)	303	1	2355289
467	19.6	20.3	3.4	chr20	54220842	54221020	(10223147)	C	LTR33	LTR/ERVL	(267)	248	32	2355290
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
6940	19.5	1.2	0.8	chr21	17289859	17291049	(29418934)	+	L1PA13	LINE/L1	1176	2377	(4408)	2381382
27383	10.2	1.7	2.5	chr21	18870078	18876908	(27833075)	C	L1PA3	LINE/L1	(3)	8147	1177	2383578
693	32.2	13.2	2.0	chr21	26173596	26174182	(20535801)	C	L3b	LINE/CR1	(52)	4047	3457	2393611
2247	13.0	2.2	1.7	chr21	26174247	26174607	(20535376)	C	MLT1B	LTR/ERVL-MaLR	(14)	376	14	2393612
15	10.0	0.0	0.0	chr21	29088716	29088737	(17621246)	+	(GT)n	Simple_repeat	1	22	(0)	2397721
2620	9.1	0.3	0.0	chr21	29088890	29089198	(17620785)	+	AluSg	SINE/Alu	1	310	(0)	2397722
600	26.4	2.5	1.9	chr21	33134537	33134694	(13575289)	C	MIR	SINE/MIR	(31)	231	73	2404363
4590	8.4	1.9	2.7	chr21	36267664	36268700	(10441283)	C	MER11A	LTR/ERVK	(0)	1266	3	2409488
2100	10.5	0.0	0.0	chr21	36268701	36268966	(10441017)	C	AluSc	SINE/Alu	(42)	267	2	2409489
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1027	17.9	8.9	0.8	chr22	17431795	17432031	(33386437)	C	L1MB8	LINE/L1	(13)	6165	5908	2428989
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2344	11.4	0.0	0.0	chr22	19934552	19934859	(30883609)	C	AluY	SINE/Alu	(1)	310	3	2432710
4625	8.2	2.7	2.0	chr22	19934860	19935775	(30882693)	+	MER11A	LTR/ERVK	109	1266	(0)	2432709
2251	11.2	0.0	0.3	chr22	20832459	20832754	(29985714)	C	AluSx1	SINE/Alu	(17)	295	1	2434013
8854	17.3	6.6	2.8	chr22	20832755	20833566	(29984902)	C	L1PA15	LINE/L1	(4874)	1911	1030	2434005
2387	15.1	8.4	0.0	chr22	24353870	24354259	(26464209)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2439910
3850	19.8	10.9	9.7	chr22	24354260	24354670	(26463798)	C	L1MC4a	LINE/L1	(610)	7272	6799	2439908
1890	13.3	5.8	0.7	chr22	24354671	24354949	(26463519)	C	AluSc	SINE/Alu	(15)	294	1	2439911
2965	26.1	9.3	4.2	chr22	28559660	28560746	(22257722)	+	L2a	LINE/L2	2069	3194	(232)	2448692
610	29.1	6.0	2.1	chr22	32792068	32792303	(18026165)	C	MIRb	SINE/MIR	(21)	247	2	2457727
326	28.3	7.2	3.1	chr22	32792309	32792463	(18026005)	C	MIR3	SINE/MIR	(14)	194	29	2457728
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
607	27.0	3.2	0.0	chr22	38870176	38870327	(11948141)	+	MIRb	SINE/MIR	86	242	(26)	2470435
1776	16.5	7.0	5.7	chr22	43093932	43094149	(7724319)	C	L1MB2	LINE/L1	(513)	5658	5450	2479565
270	33.8	0.0	0.0	chr22	43094151	43094221	(7724247)	C	MIRc	SINE/MIR	(114)	154	84	2479574
329	32.3	11.0	1.9	chr22	45106355	45106619	(5711849)	+	L2b	LINE/L2	3079	3370	(5)	2483261
2315	10.3	0.0	0.3	chr22	46782053	46782352	(4036116)	C	AluSc	SINE/Alu	(10)	299	1	2486057
2848	22.2	6.6	0.4	chr22	46782481	46783218	(4035250)	C	L1MB7	LINE/L1	(12)	6172	5386	2486058
704	5.2	1.1	2.0	chr3	10001	10916	(198284643)	+	(CTAACC)n	Simple_repeat	1	926	(0)	2492347
3254	21.3	2.1	1.3	chr3	5531293	5532040	(192763519)	C	L1PA13	LINE/L1	(4819)	1966	1213	2500964
2208	15.0	5.4	3.0	chr3	9844232	9844663	(188450896)	+	LTR8A	LTR/ERV1	1	443	(284)	2508088
2023	3.2	0.4	0.4	chr3	9844665	9844911	(188450648)	+	AluY	SINE/Alu	64	310	(1)	2508089
360	25.5	1.0	2.0	chr3	14174768	14174867	(184120692)	+	L1ME4a	LINE/L1	5961	6059	(65)	2516411
461	27.8	11.5	9.2	chr3	14175029	14175601	(184119958)	+	L2a	LINE/L2	2842	3426	(0)	2516412
484	27.8	6.8	5.4	chr3	14888401	14888659	(183406900)	+	Charlie16a	DNA/hAT-Charlie	7	269	(73)	2517797
223	34.0	8.2	2.0	chr3	14888666	14888767	(183406792)	C	L2b	LINE/L2	(169)	3206	3098	2517798
904	20.0	2.1	4.6	chr3	14888833	14889026	(183406533)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2517799
1090	14.1	0.6	3.2	chr3	14966408	14966592	(183328967)	+	AluJo	SINE/Alu	108	287	(25)	2517935
492	22.7	0.0	0.0	chr3	14966813	14966900	(183328659)	+	MIR	SINE/MIR	1	88	(174)	2517936
2229	15.8	2.1	0.2	chr3	14966901	14967364	(183328195)	C	L1M4	LINE/L1	(2533)	3613	3141	2517937
3831	12.2	6.1	2.7	chr3	15619724	15620803	(182674756)	C	MER11A	LTR/ERVK	(4)	1232	1	2519162
11858	12.8	0.7	0.4	chr3	19835876	19839091	(178456468)	+	L1PREC2	LINE/L1	1960	5183	(2958)	2525190
227	18.0	0.0	2.0	chr3	33214911	33214961	(165080598)	C	Zaphod2	DNA/hAT-Tip100	(3322)	202	153	2545508
310	38.5	0.0	0.0	chr3	38266870	38266999	(160028560)	C	MIR3	SINE/MIR	(21)	187	58	2552776
18	4.0	0.0	0.0	chr3	38267309	38267334	(160028225)	+	(CCCCA)n	Simple_repeat	1	26	(0)	2552777
260	30.6	15.3	4.2	chr3	38750538	38750728	(159544831)	C	MIRb	SINE/MIR	(1)	267	52	2553483
1543	25.8	5.9	1.9	chr3	38750962	38751435	(159544124)	+	LTR33	LTR/ERVL	14	507	(8)	2553484
15918	15.1	1.7	0.2	chr3	46168419	46170262	(152125297)	C	L1PREC2	LINE/L1	(3753)	2920	1049	2564995
2106	10.2	2.0	4.0	chr3	48894269	48894571	(149400988)	C	AluSx	SINE/Alu	(15)	297	1	2570209
331	6.1	0.0	0.0	chr3	48894573	48894621	(149400938)	+	MLT1F	LTR/ERVL-MaLR	474	522	(26)	2570210
768	12.9	0.0	2.6	chr3	48894628	48894743	(149400816)	C	AluJo	SINE/Alu	(17)	295	183	2570211
1945	9.2	2.1	6.1	chr3	48894813	48894999	(149400560)	C	AluSp	SINE/Alu	(0)	313	133	2570212
2145	12.7	1.0	0.0	chr3	48895000	48895307	(149400252)	C	AluSp	SINE/Alu	(2)	311	1	2570213
18169	16.9	4.8	3.6	chr3	51105674	51108038	(147187521)	+	L1PREC2	LINE/L1	96	2524	(4325)	2573959
365	30.6	9.2	4.0	chr3	53881270	53881494	(144414065)	C	L1M5	LINE/L1	(789)	5357	5120	2578190
235	29.1	7.1	3.3	chr3	53881582	53881702	(144413857)	C	MIRb	SINE/MIR	(25)	243	118	2578191
19	8.9	3.5	8.5	chr3	53882033	53882089	(144413470)	+	(CTTCTC)n	Simple_repeat	1	59	(0)	2578192
497	19.4	8.8	0.8	chr3	57952015	57952139	(140343420)	C	LTR37B	LTR/ERV1	(3)	465	330	2585002
2136	17.8	3.9	2.4	chr3	57952149	57952604	(140342955)	C	MLT1C	LTR/ERVL-MaLR	(4)	463	1	2585003
1469	30.4	4.9	6.9	chr3	64578584	64579665	(133715894)	+	L2a	LINE/L2	2375	3426	(0)	2595987
3723	17.1	5.1	0.6	chr3	65013047	65013739	(133281820)	+	MER44C	DNA/TcMar-Tigger	1	726	(7)	2596760
486	30.5	7.4	1.5	chr3	69940042	69940244	(128355315)	C	MIRb	SINE/MIR	(2)	266	51	2605071
484	29.9	8.3	1.8	chr3	69940799	69941024	(128354535)	+	MIR	SINE/MIR	27	260	(8)	2605072
480	23.4	9.7	6.0	chr3	87576501	87576668	(110718891)	C	MER5B	DNA/hAT-Charlie	(3)	175	1	2629709
304	30.2	3.2	5.7	chr3	87576669	87576746	(110718813)	C	MER5B	DNA/hAT-Charlie	(74)	104	25	2629708
483	26.9	8.6	2.7	chr3	95614815	95615143	(102680416)	+	ORSL-2b	DNA/hAT-Tip100	116	465	(43)	2635705
1435	33.9	4.0	2.5	chr3	95615144	95615872	(102679687)	+	ERV3-16A3_I-int	LTR/ERVL	4090	4830	(396)	2635706
8612	14.2	1.8	1.1	chr3	98831351	98834041	(99461518)	C	L1PREC2	LINE/L1	(2881)	5260	1222	2639511
24	13.4	0.0	8.8	chr3	106280411	106280478	(92015081)	+	(AATAA)n	Simple_repeat	1	68	(0)	2649319
197	25.0	6.7	0.0	chr3	106280528	106280583	(92014976)	+	MIR3	SINE/MIR	149	208	(0)	2649320
265	32.1	2.8	1.9	chr3	106280716	106280823	(92014736)	+	L2a	LINE/L2	3318	3426	(0)	2649321
626	31.8	2.5	2.0	chr3	107459143	107459341	(90836218)	+	MIR3	SINE/MIR	3	202	(6)	2650883
545	29.8	13.8	1.5	chr3	108073561	108073826	(90221733)	C	L2a	LINE/L2	(401)	3018	2715	2651781
353	37.8	29.6	0.8	chr3	108073843	108074241	(90221318)	+	L3	LINE/CR1	3574	4091	(8)	2651782
20283	17.2	5.2	1.8	chr3	112251076	112258347	(86037212)	+	L1PREC2	LINE/L1	1	7796	(359)	2657555
190	26.9	2.9	1.5	chr3	113745275	113745342	(84550217)	C	AmnSINE1	SINE/5S-Deu-L2	(417)	158	90	2659670
12604	15.3	2.0	0.8	chr3	120286908	120289383	(78006176)	+	L1PA12	LINE/L1	1	3331	(4830)	2668925
1151	9.0	0.0	0.0	chr3	120289384	120289516	(78006043)	+	AluSx	SINE/Alu	1	133	(179)	2668926
13143	19.0	1.4	2.6	chr3	121370580	121372787	(76922772)	C	L1PA13	LINE/L1	(4588)	2197	14	2670301
646	28.8	0.0	1.1	chr3	124015328	124015506	(74280053)	+	MIRb	SINE/MIR	47	223	(45)	2674655
3554	12.3	7.8	2.4	chr3	125827506	125828577	(72466982)	C	MER11A	LTR/ERVK	(0)	1236	1	2677746
788	25.6	7.0	12.5	chr3	128996609	128997095	(69298464)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	92	2682842
13499	17.3	3.0	4.2	chr3	137536136	137541288	(60754271)	C	L1PA15	LINE/L1	(1)	6784	1700	2696236
1946	14.9	0.0	3.9	chr3	137541289	137541597	(60753962)	+	AluSz6	SINE/Alu	3	299	(13)	2696237
13499	19.4	3.5	3.2	chr3	137541598	137543274	(60752285)	C	L1PA15	LINE/L1	(5086)	1699	14	2696236
6013	5.7	21.4	15.0	chr3	138486108	138487277	(59808282)	C	MER11A	LTR/ERVK	(0)	1266	1	2697617
14	15.9	0.0	0.0	chr3	140310061	140310088	(57985471)	+	(TCC)n	Simple_repeat	1	28	(0)	2700652
14455	12.6	2.8	1.4	chr3	142285641	142288065	(56007494)	+	HUERS-P3b-int	LTR/ERV1	4489	6946	(472)	2703887
991	11.2	1.2	1.2	chr3	142288073	142288244	(56007315)	+	PABL_A-int	LTR/ERV1	2388	2559	(2456)	2703888
1211	13.6	0.5	0.0	chr3	142288401	142288598	(56006961)	+	HUERS-P3b-int	LTR/ERV1	8721	8919	(0)	2703887
3070	18.1	2.5	4.6	chr3	142288599	142289224	(56006335)	+	LTR9	LTR/ERV1	1	612	(0)	2703887
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
437	25.5	15.5	4.4	chr3	149323198	149323313	(48972246)	+	MIRc	SINE/MIR	128	251	(17)	2713375
2608	5.1	3.1	0.2	chr3	149323476	149323880	(48971679)	+	MER11A	LTR/ERVK	1	511	(755)	2713377
326	29.1	5.1	2.0	chr3	159800592	159800742	(38494817)	+	Charlie20a	DNA/hAT-Charlie	1	156	(651)	2728765
550	22.4	9.0	2.5	chr3	160651523	160651719	(37643840)	C	MamGypLTR2b	LTR/Gypsy	(41)	881	671	2730127
1112	18.1	11.1	0.7	chr3	160652109	160652398	(37643161)	+	MER33	DNA/hAT-Charlie	1	324	(0)	2730128
309	14.8	0.0	1.8	chr3	164305476	164305530	(33990029)	+	L1P4	LINE/L1	5777	5830	(333)	2734750
5426	14.9	1.9	0.9	chr3	164305533	164307133	(33988426)	+	L1PBa	LINE/L1	13	2219	(4644)	2734751
615	21.6	3.8	0.7	chr3	171747691	171747844	(26547715)	C	MIR	SINE/MIR	(24)	238	80	2745020
2530	7.7	0.0	0.0	chr3	175891568	175891878	(22403681)	+	AluY	SINE/Alu	1	311	(0)	2750997
7546	12.0	1.7	3.9	chr3	176800307	176800664	(21494895)	+	L1PREC2	LINE/L1	3002	3357	(4798)	2752146
1671	21.4	0.0	1.9	chr3	176800665	176800982	(21494577)	+	AluJb	SINE/Alu	1	312	(0)	2752147
3685	10.4	2.9	2.0	chr3	180771760	180772737	(17522822)	C	MER11A	LTR/ERVK	(0)	1071	1	2758305
47	9.6	0.0	0.0	chr3	186521228	186521294	(11774265)	+	(GT)n	Simple_repeat	1	67	(0)	2768488
647	32.9	9.2	3.9	chr3	190970855	190971265	(7324294)	C	LTR16	LTR/ERVL	(3)	435	1	2775904
2277	11.7	0.3	0.0	chr3	197564913	197565221	(730338)	C	AluSp	SINE/Alu	(3)	310	1	2787137
15867	11.1	5.5	2.3	chr3	197565222	197567258	(728301)	+	MER4-int	LTR/ERV1	4520	6598	(0)	2787133
696	25.2	5.5	1.0	chr4	8079545	8079752	(182134803)	C	L1MD2	LINE/L1	(4)	6355	6138	2801197
727	31.1	5.5	0.4	chr4	12223224	12223497	(177991058)	C	LTR16C	LTR/ERVL	(0)	489	201	2807457
7463	3.7	0.2	0.0	chr4	12223679	12224800	(177989755)	C	L1PA4	LINE/L1	(5)	6150	5025	2807458
1200	16.7	2.3	0.0	chr4	16144439	16144653	(174069902)	+	L1MA4	LINE/L1	6035	6254	(46)	2813866
4638	9.2	2.6	2.3	chr4	16144654	16145669	(174068886)	+	MER11A	LTR/ERVK	1	1266	(0)	2813867
8565	19.1	2.2	2.0	chr4	30357932	30361793	(159852762)	C	L1PA15	LINE/L1	(2426)	4247	403	2836614
8182	14.9	2.2	0.5	chr4	32432121	32433449	(157781106)	+	L1PA13	LINE/L1	1225	2576	(4209)	2839453
14	21.2	0.0	4.3	chr4	41544946	41544992	(148669563)	+	(ATTTTCC)n	Simple_repeat	1	47	(0)	2854246
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
6458	11.4	3.2	2.1	chr4	54458780	54459751	(135754804)	+	L1P2	LINE/L1	5	988	(5196)	2869339
4308	11.4	3.5	1.9	chr4	54459752	54460753	(135753802)	+	MER11A	LTR/ERVK	1	1266	(0)	2869340
358	20.1	7.6	8.8	chr4	55163563	55163709	(135050846)	+	L1ME3G	LINE/L1	335	479	(445)	2870450
673	27.9	3.0	1.4	chr4	55163772	55164004	(135050551)	+	MIR	SINE/MIR	11	242	(26)	2870451
590	21.1	18.1	0.0	chr4	55164073	55164262	(135050293)	C	L1ME1	LINE/L1	(13)	6166	5935	2870452
18636	16.7	3.6	0.9	chr4	58424991	58431952	(131782603)	C	L1PA14	LINE/L1	(0)	8156	562	2875763
4706	9.4	3.0	1.8	chr4	58440121	58441145	(131773410)	C	MER11A	LTR/ERVK	(0)	1266	1	2875779
467	19.0	1.9	0.4	chr4	58441146	58441230	(131773325)	C	AluJb	SINE/Alu	(45)	88	1	2875778
3444	22.0	6.4	2.7	chr4	61517138	61518029	(128696526)	+	Charlie17b	DNA/hAT-Charlie	43	969	(235)	2879532
15087	16.2	2.9	1.1	chr4	63668535	63670299	(126544256)	C	L1PREC2	LINE/L1	(3691)	4450	2717	2882262
6270	7.5	19.4	5.5	chr4	69424382	69425460	(120789095)	C	MER11A	LTR/ERVK	(1)	1265	1	2889380
15213	18.4	2.6	1.1	chr4	69549676	69555210	(120659345)	+	L1PA14	LINE/L1	4	5627	(1046)	2889514
21114	14.8	2.8	0.9	chr4	70569005	70572989	(119641566)	C	L1PA14	LINE/L1	(3272)	4869	1	2890769
5446	9.3	10.2	2.9	chr4	71905000	71906080	(118308475)	+	MER11A	LTR/ERVK	1	1266	(0)	2892817
19	4.5	0.0	0.0	chr4	75653590	75653612	(114560943)	+	(A)n	Simple_repeat	1	23	(0)	2897781
7436	5.8	13.6	4.5	chr4	77945570	77946714	(112267841)	C	MER11A	LTR/ERVK	(0)	1266	1	2901459
2542	10.0	1.4	1.6	chr4	79128709	79129073	(111085482)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2903213
11230	14.8	1.9	1.0	chr4	79129074	79129876	(111084679)	C	L1PA13	LINE/L1	(4942)	1843	1030	2903211
2491	9.7	0.0	0.7	chr4	87417483	87417791	(102796764)	+	AluSc	SINE/Alu	1	307	(2)	2915475
327	9.2	0.0	27.0	chr4	87417792	87417838	(102796717)	C	MSTB	LTR/ERVL-MaLR	(27)	399	362	2915474
4781	9.2	2.8	3.3	chr4	87417839	87418859	(102795696)	+	MER11A	LTR/ERVK	1	1266	(0)	2915476
18	4.7	0.0	0.0	chr4	87589382	87589403	(102625152)	+	(CA)n	Simple_repeat	1	22	(0)	2915782
507	21.1	13.0	0.0	chr4	87589405	87589518	(102625037)	C	Tigger17b	DNA/TcMar-Tigger	(1)	1072	942	2915783
2018	12.4	4.6	4.9	chr4	87589529	87590012	(102624543)	+	LTR26	LTR/ERV1	2	600	(3)	2915784
2531	18.8	3.9	6.4	chr4	87590013	87590291	(102624264)	C	Tigger17a	DNA/TcMar-Tigger	(124)	530	268	2915785
318	36.3	8.9	4.7	chr4	89752683	89753031	(100461524)	+	L2b	LINE/L2	2809	3156	(219)	2919075
449	33.7	2.7	1.1	chr4	89753304	89753483	(100461072)	+	LTR88a	LTR/Gypsy?	530	712	(104)	2919076
234	35.7	3.1	1.6	chr4	89753374	89753501	(100461054)	+	LTR104_Mam	LTR/Gypsy	1292	1421	(88)	2919077
4411	10.6	3.8	2.0	chr4	91103523	91104534	(99110021)	+	MER11A	LTR/ERVK	1	1266	(0)	2920787
295	13.3	0.0	0.0	chr4	94932042	94932086	(95282469)	C	L5	LINE/RTE-X	(1)	2264	2220	2925769
2509	10.2	9.3	3.0	chr4	95925384	95925909	(94288646)	+	MER4-int	LTR/ERV1	1	605	(5993)	2926992
4468	8.9	3.3	4.0	chr4	95925931	95926951	(94287604)	+	MER11A	LTR/ERVK	1	1266	(0)	2926993
2088	11.2	0.4	1.8	chr4	97625336	97625612	(92588943)	C	AluSx4	SINE/Alu	(37)	273	1	2929131
302	30.3	0.9	4.4	chr4	97625614	97625727	(92588828)	+	MLT1J1	LTR/ERVL-MaLR	33	142	(302)	2929132
20710	11.9	1.9	0.4	chr4	99448269	99455419	(90759136)	C	L1PA14	LINE/L1	(21)	8135	562	2931700
20236	13.9	2.1	1.3	chr4	99970976	99976182	(90238373)	+	L1PREC2	LINE/L1	13	5272	(1494)	2932416
17576	13.9	1.8	1.5	chr4	103217040	103223626	(86990929)	+	L1PREC2	LINE/L1	561	7116	(1025)	2936777
737	21.8	0.6	2.2	chr4	104404309	104404491	(85810064)	C	L1MC1	LINE/L1	(5347)	1404	1225	2938162
1481	10.7	0.5	0.0	chr4	104404494	104404709	(85809846)	+	L1PA12	LINE/L1	2374	2590	(4391)	2938164
3405	24.0	3.9	7.7	chr4	104404706	104405816	(85808739)	C	L1MC1	LINE/L1	(4971)	1074	9	2938162
18840	13.1	3.3	0.7	chr4	106103721	106109008	(84105547)	+	L1PA12	LINE/L1	580	6388	(1753)	2940384
1974	16.9	1.6	2.2	chr4	108680714	108681081	(81533474)	C	MER47A	DNA/TcMar-Tigger	(0)	366	1	2943876
382	25.9	6.0	4.2	chr4	108681082	108681179	(81533376)	C	L1MEd	LINE/L1	(4009)	2137	2024	2943875
585	32.8	6.7	4.3	chr4	108681205	108681747	(81532808)	+	MLT1G3	LTR/ERVL-MaLR	3	575	(4)	2943877
6345	20.2	0.9	3.1	chr4	110503240	110504547	(79710008)	C	L1PREC2	LINE/L1	(4721)	3434	2157	2946721
253	35.2	5.3	0.0	chr4	113127759	113127866	(77086689)	C	L2	LINE/L2	(627)	2792	2679	2950425
1491	16.8	2.9	0.3	chr4	116552311	116552609	(73661946)	+	L1PA14	LINE/L1	1703	2009	(4680)	2954603
3519	26.9	2.0	4.0	chr4	116552610	116554170	(73660385)	C	L1PA13	LINE/L1	(4988)	1797	9	2954602
2197	10.8	0.3	0.0	chr4	117466774	117467069	(72747486)	+	AluSz6	SINE/Alu	4	300	(12)	2955718
589	35.3	6.5	6.5	chr4	117995675	117996452	(72218103)	+	L2b	LINE/L2	2598	3375	(0)	2956310
7176	20.1	5.8	2.6	chr4	118075966	118078332	(72136223)	C	L1PA15	LINE/L1	(4181)	2604	102	2956404
4704	9.0	2.6	1.4	chr4	120244694	120245710	(69968845)	C	MER11A	LTR/ERVK	(0)	1266	1	2959557
2330	9.4	0.0	3.8	chr4	125809642	125809961	(64404594)	+	AluSg	SINE/Alu	1	308	(2)	2967096
4731	26.4	10.6	4.7	chr4	125809981	125810298	(64404257)	C	Charlie6	DNA/hAT-Charlie	(98)	3402	3076	2967097
2193	10.4	0.3	3.6	chr4	125810299	125810605	(64403950)	C	AluSq2	SINE/Alu	(16)	297	1	2967098
2000	25.2	6.1	0.8	chr4	126269023	126269553	(63945002)	+	MLT1F1	LTR/ERVL-MaLR	1	561	(8)	2967626
1213	8.9	3.2	1.6	chr4	127791264	127791446	(62423109)	C	MER30B	DNA/hAT-Charlie	(0)	190	5	2969551
1160	16.3	7.4	9.6	chr4	127791447	127791567	(62422988)	C	MER33	DNA/hAT-Charlie	(221)	103	1	2969549
383	29.9	11.5	8.0	chr4	127791735	127792010	(62422545)	+	L2c	LINE/L2	3101	3387	(0)	2969548
2282	26.2	4.7	2.8	chr4	129743234	129744067	(60470488)	+	Charlie25	DNA/hAT-Charlie	51	901	(1623)	2972536
2158	12.4	0.3	0.3	chr4	129744068	129744358	(60470197)	C	AluSc	SINE/Alu	(18)	291	1	2972537
220	34.7	6.9	0.0	chr4	134105826	134105946	(56108609)	C	L2	LINE/L2	(584)	2835	2706	2977718
2959	14.9	5.5	0.0	chr4	134475107	134475609	(55738946)	C	LTR27D	LTR/ERV1	(2)	613	82	2978144
1318	26.9	9.1	4.8	chr4	134475630	134476451	(55738104)	C	L1ME3	LINE/L1	(279)	5883	5036	2978145
434	16.0	11.1	5.3	chr4	134673993	134674144	(55540411)	C	MER53	DNA/hAT	(26)	167	6	2978417
9211	18.5	3.9	1.3	chr4	134787964	134789111	(55425444)	C	L1PA13	LINE/L1	(4716)	2069	870	2978538
11015	25.6	4.3	4.4	chr4	136214912	136220901	(53993654)	C	L1PA13	LINE/L1	(830)	5933	11	2980213
592	21.6	2.2	1.5	chr4	136280799	136280934	(53933621)	+	L1MC2	LINE/L1	254	390	(6361)	2980281
654	13.2	16.6	3.5	chr4	136280984	136281101	(53933454)	+	L1MC2	LINE/L1	810	954	(5091)	2980281
4176	12.1	2.0	0.2	chr4	136281102	136281733	(53932822)	C	LTR9B	LTR/ERV1	(0)	644	1	2980282
11641	11.4	1.1	0.7	chr4	140446784	140448839	(49765716)	C	L1PREC2	LINE/L1	(3074)	5067	3000	2986234
14	8.2	3.9	0.0	chr4	140448917	140448942	(49765613)	+	(CAA)n	Simple_repeat	1	27	(0)	2986237
503	9.8	6.8	0.0	chr4	140448943	140449024	(49765531)	+	MER53	DNA/hAT	106	193	(0)	2986238
13403	22.9	3.4	3.0	chr4	143580117	143582898	(46631657)	+	L1PREC2	LINE/L1	561	3332	(4823)	2990498
1405	19.6	8.8	0.7	chr4	143582899	143583168	(46631387)	C	AluJb	SINE/Alu	(18)	294	1	2990499
19573	10.5	2.2	1.4	chr4	144162242	144164184	(46050371)	C	L1PREC2	LINE/L1	(3138)	5003	2994	2991268
1116	28.3	7.2	3.3	chr4	144164167	144164619	(46049936)	C	L1PREC2	LINE/L1	(6450)	1705	1234	2991268
19385	12.1	3.1	1.8	chr4	145567059	145572099	(44642456)	+	L1PREC2	LINE/L1	1260	6387	(393)	2993106
20776	12.9	2.2	1.0	chr4	148189228	148193505	(42021050)	C	L1MA6	LINE/L1	(2188)	4674	251	2996806
3415	4.1	0.5	0.0	chr4	150245370	150245780	(39968775)	C	L1PA5	LINE/L1	(0)	6154	5742	2999516
22788	8.8	1.7	1.3	chr4	152836793	152840713	(37373842)	C	L1PB1	LINE/L1	(0)	6867	2907	3003656
208	30.8	0.0	5.8	chr4	156750597	156750665	(33463890)	C	MIR3	SINE/MIR	(17)	191	127	3009212
1814	17.5	4.8	5.7	chr4	160016398	160016815	(30197740)	C	MLT2D	LTR/ERVL	(0)	414	1	3013620
18796	6.0	1.0	0.0	chr4	164749802	164752244	(25462311)	+	HERVK11-int	LTR/ERVK	5486	7953	(0)	3019799
4586	8.8	2.6	1.7	chr4	164752245	164753249	(25461306)	+	MER11A	LTR/ERVK	4	1266	(0)	3019799
724	26.1	6.6	9.1	chr4	165192874	165193047	(25021508)	+	MIR	SINE/MIR	5	184	(78)	3020709
1040	27.2	7.7	7.1	chr4	165193048	165193526	(25021029)	+	MLT1H2	LTR/ERVL-MaLR	4	485	(4)	3020710
363	26.8	14.4	3.2	chr4	168607546	168607699	(21606856)	C	MIRb	SINE/MIR	(28)	240	67	3025059
7237	22.6	2.4	0.3	chr4	169826223	169827753	(20386802)	+	L1PREC2	LINE/L1	2150	3714	(4441)	3026908
1530	25.0	4.9	1.1	chr4	171968198	171968646	(18245909)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	3029640
8940	18.1	4.0	1.1	chr4	172327157	172330610	(17883945)	C	L1PREC2	LINE/L1	(3252)	4889	1	3030113
3664	27.9	5.2	6.2	chr4	174947885	174949736	(15264819)	C	L1PA15	LINE/L1	(4731)	2054	6	3033609
2231	22.2	2.3	2.3	chr4	178329343	178329816	(11884739)	C	MER70B	LTR/ERVL	(102)	476	3	3038050
251	32.8	5.1	12.8	chr4	185915620	185915979	(4298576)	C	L2c	LINE/L2	(1)	3386	3056	3048917
308	28.7	14.2	1.9	chr4	185916080	185916239	(4298316)	C	L2c	LINE/L2	(550)	2869	2687	3048917
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
15060	13.2	3.6	1.1	chr5	113898	114460	(181423799)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1851	3055060
236	15.9	14.9	0.0	chr5	14937735	14937797	(166600462)	+	Tigger15a	DNA/TcMar-Tigger	469	542	(173)	3072914
15302	19.3	5.3	4.0	chr5	20647009	20650438	(160887821)	+	L1PA8A	LINE/L1	84	3846	(4309)	3080935
3011	18.5	5.0	10.5	chr5	31623174	31623826	(149914433)	C	L1MC4a	LINE/L1	(158)	7724	7120	3095247
1738	15.5	3.6	3.3	chr5	31623842	31624145	(149914114)	C	AluJr	SINE/Alu	(7)	305	1	3095249
11568	15.4	2.6	0.6	chr5	33426319	33427500	(148110759)	C	L1PA15	LINE/L1	(3974)	2715	1490	3098324
27	3.4	0.0	0.0	chr5	33427501	33427530	(148110729)	+	(TTTGTT)n	Simple_repeat	1	30	(0)	3098325
11568	19.7	3.1	1.3	chr5	33427531	33428852	(148109407)	C	L1PA15	LINE/L1	(5200)	1489	1	3098324
659	19.1	1.6	3.2	chr5	33447032	33447157	(148091102)	+	FAM	SINE/Alu	42	165	(20)	3098362
12	14.4	0.0	0.0	chr5	33447159	33447182	(148091077)	+	(GGAA)n	Simple_repeat	1	24	(0)	3098363
15623	13.3	2.0	1.4	chr5	35384263	35390283	(146147976)	+	L1PA13	LINE/L1	3	6119	(661)	3101326
14094	11.7	1.9	3.2	chr5	36082797	36086024	(145452235)	+	L1PA12	LINE/L1	1563	4777	(3364)	3102272
21197	9.9	2.2	0.7	chr5	40700262	40703620	(140834639)	+	L1PA14	LINE/L1	1938	5611	(2530)	3109295
2342	11.8	0.7	0.0	chr5	55533102	55533407	(126004852)	+	AluSx	SINE/Alu	1	308	(4)	3123397
11649	11.0	3.8	0.2	chr5	56389571	56393036	(125145223)	+	L1PA14	LINE/L1	1838	5423	(2718)	3124962
363	30.3	6.8	4.9	chr5	59764265	59764498	(121773761)	C	MIRb	SINE/MIR	(0)	268	26	3129936
16865	21.7	3.3	1.1	chr5	64283848	64285421	(117252838)	C	L1PA13	LINE/L1	(4012)	2773	1162	3136248
3636	9.4	4.2	4.0	chr5	67745942	67747019	(113791240)	C	MER11A	LTR/ERVK	(0)	1266	1	3141212
4983	15.1	3.8	0.8	chr5	67747036	67748006	(113790253)	+	L1MCa	LINE/L1	1053	2053	(4698)	3141211
3128	17.4	1.8	1.3	chr5	70458831	70459378	(111078881)	+	HUERS-P3-int	LTR/ERV1	142	692	(8227)	3145804
1304	17.3	2.4	0.8	chr5	70459379	70459623	(111078636)	+	LTR9	LTR/ERV1	284	532	(80)	3145805
62	0.0	0.0	0.0	chr5	71451105	71451157	(110087102)	+	(AC)n	Simple_repeat	1	53	(0)	3147462
648	28.8	6.2	6.8	chr5	72511408	72511697	(109026562)	C	MIR	SINE/MIR	(0)	268	7	3149085
359	31.1	6.2	7.2	chr5	72511837	72512241	(109026018)	C	L2c	LINE/L2	(91)	3296	2746	3149086
552	24.0	3.5	4.8	chr5	73027345	73027550	(108510709)	C	L1MD	LINE/L1	(920)	5226	5024	3149882
679	18.8	0.7	0.7	chr5	73027549	73027703	(108510556)	+	L1MD3	LINE/L1	6902	7056	(939)	3149883
908	23.0	0.0	0.0	chr5	74505006	74505183	(107033076)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3152076
17745	14.2	1.9	0.2	chr5	75534498	75537594	(106000665)	C	L1PA15	LINE/L1	(3526)	3147	8	3153683
13	4.2	8.0	0.0	chr5	82397207	82397231	(99141028)	+	(TTCTT)n	Simple_repeat	1	27	(0)	3164573
25009	12.5	1.4	0.8	chr5	82562491	82569385	(98968874)	+	L1PREC2	LINE/L1	7	7066	(1075)	3164811
13405	17.8	2.0	0.8	chr5	85413779	85416494	(96121765)	C	L1PA14	LINE/L1	(3965)	3576	12	3168502
22218	14.6	9.6	0.6	chr5	87598874	87602733	(93935526)	C	L1PREC2	LINE/L1	(3901)	4254	11	3171305
15685	21.2	1.9	0.9	chr5	90324389	90327323	(91210936)	C	L1PA15	LINE/L1	(4134)	4021	1132	3174606
275	29.2	8.6	10.5	chr5	90356333	90356523	(91181736)	C	Eulor9C	DNA	(61)	209	23	3174645
1163	24.1	7.2	2.5	chr5	93004191	93004509	(88533750)	+	MLT1C	LTR/ERVL-MaLR	133	467	(0)	3178131
13292	13.0	1.7	1.0	chr5	97442558	97444827	(84093432)	C	L1PA12	LINE/L1	(4280)	3875	1597	3183953
354	31.3	4.7	2.4	chr5	100616467	100616633	(80921626)	C	HERVL-int	LTR/ERVL	(2758)	2956	2786	3187984
2668	18.8	0.9	1.9	chr5	100616659	100617189	(80921070)	+	L1P4e	LINE/L1	861	1386	(4905)	3187985
456	32.0	3.1	1.8	chr5	100617204	100617470	(80920789)	C	HERVL-int	LTR/ERVL	(3490)	2267	2019	3187984
13404	14.6	3.4	1.0	chr5	105720712	105725778	(75812481)	+	L1PREC2	LINE/L1	1	6132	(2009)	3194183
2340	25.5	8.1	1.1	chr5	106307732	106308521	(75229738)	C	L1MC4	LINE/L1	(131)	7911	7062	3194953
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
187	31.9	6.2	5.6	chr5	107507911	107508053	(74030206)	C	L2	LINE/L2	(1321)	2098	1955	3196433
18	12.2	0.0	0.0	chr5	107508378	107508404	(74029855)	+	(CA)n	Simple_repeat	1	27	(0)	3196434
270	31.6	3.6	8.3	chr5	112848164	112848308	(68689951)	+	MLT1M	LTR/ERVL-MaLR	109	246	(426)	3203383
1257	15.8	4.9	3.1	chr5	112848504	112848725	(68689534)	+	AluJr	SINE/Alu	76	301	(11)	3203384
3652	10.8	8.2	2.3	chr5	119450491	119451542	(62086717)	C	MER11A	LTR/ERVK	(4)	1232	1	3212324
6269	23.5	4.7	1.2	chr5	121316112	121317661	(60220598)	C	L1PA13	LINE/L1	(4208)	2577	970	3214550
16	0.0	0.0	0.0	chr5	122850791	122850808	(58687451)	+	(A)n	Simple_repeat	1	18	(0)	3216536
2274	13.3	0.0	0.7	chr5	122851157	122851464	(58686795)	C	AluSz	SINE/Alu	(4)	308	3	3216537
6831	15.5	2.1	3.0	chr5	124381331	124382553	(57155706)	+	L1MB3	LINE/L1	20	1231	(5153)	3218598
4593	8.8	2.9	3.8	chr5	124382554	124383570	(57154689)	+	MER11A	LTR/ERVK	1	1266	(0)	3218599
17507	11.9	4.1	0.5	chr5	125353870	125358501	(56179758)	C	L1PB1	LINE/L1	(2047)	4815	1	3219948
2645	16.4	1.1	2.3	chr5	127768277	127768623	(53769636)	+	MLT1C	LTR/ERVL-MaLR	123	467	(0)	3223255
450	27.1	8.3	1.6	chr5	129525932	129526107	(52012152)	C	MIRb	SINE/MIR	(64)	204	22	3225444
12	19.9	2.3	4.4	chr5	131164982	131165025	(50373234)	+	(TCCCC)n	Simple_repeat	1	45	(0)	3227449
2228	13.5	1.6	16.5	chr5	131902454	131902655	(49635604)	+	MSTA	LTR/ERVL-MaLR	289	428	(0)	3228684
14319	18.1	2.9	6.2	chr5	131902656	131904570	(49633689)	+	L1PA15	LINE/L1	1613	3463	(3303)	3228683
5916	14.7	1.8	4.7	chr5	142774398	142775470	(38762789)	C	L1MC2	LINE/L1	(3)	6341	5300	3246643
1796	17.8	3.5	0.3	chr5	142775471	142775830	(38762429)	C	L1MB4	LINE/L1	(7)	6173	5802	3246644
305	34.2	1.7	0.0	chr5	146099955	146100068	(35438191)	+	MER5A	DNA/hAT-Charlie	53	168	(21)	3251864
1237	19.0	13.4	3.0	chr5	146100356	146100761	(35437498)	+	ORSL-2b	DNA/hAT-Tip100	5	459	(49)	3251865
469	21.1	2.9	2.9	chr5	146504252	146504388	(35033871)	C	Tigger15a	DNA/TcMar-Tigger	(99)	616	480	3252679
1447	11.9	1.3	6.6	chr5	146504684	146504764	(35033495)	C	MER30	DNA/hAT-Charlie	(0)	230	158	3252680
20829	11.0	0.9	0.5	chr5	148534172	148540378	(32997881)	+	L1PA14	LINE/L1	1908	8147	(9)	3256032
313	20.3	6.3	0.0	chr5	149067093	149067166	(32471093)	C	MER102c	DNA/hAT-Charlie	(0)	331	258	3256965
5127	15.6	6.0	0.0	chr5	149067182	149067952	(32470307)	C	LTR8B	LTR/ERV1	(0)	820	1	3256966
2440	8.0	0.0	0.0	chr5	150174777	150175076	(31363183)	C	AluSq2	SINE/Alu	(13)	300	1	3259367
13	0.0	0.0	0.0	chr5	150175114	150175130	(31363129)	+	(ATC)n	Simple_repeat	1	17	(0)	3259368
525	33.0	1.0	3.5	chr5	150175143	150175340	(31362919)	C	MIRb	SINE/MIR	(51)	217	25	3259369
8174	24.0	1.1	2.8	chr5	155352081	155353696	(26184563)	+	L1PA15	LINE/L1	1	2023	(4762)	3269078
15	23.2	0.0	2.1	chr5	159175453	159175508	(22362751)	+	(AATATTT)n	Simple_repeat	1	54	(0)	3275660
10548	20.5	2.8	0.8	chr5	164419220	164422651	(17115608)	C	L1PREC2	LINE/L1	(2823)	5318	1807	3283964
196	35.9	8.0	5.2	chr5	169173277	169173443	(12364816)	C	L2c	LINE/L2	(282)	3105	2937	3291376
438	28.6	7.4	1.2	chr5	171658410	171658650	(9879609)	C	L4_B_Mam	LINE/RTE-X	(28)	4913	4657	3295779
1791	17.0	2.3	2.9	chr5	172266755	172267060	(9271199)	+	AluJr4	SINE/Alu	1	304	(8)	3297053
11265	20.6	5.3	3.2	chr5	175145194	175146388	(6391871)	+	L1MC3	LINE/L1	4208	5443	(1121)	3302877
3881	6.9	0.6	0.4	chr5	175146402	175146986	(6391273)	+	MER11A	LTR/ERVK	1	824	(442)	3302882
8834	19.4	7.3	2.1	chr5	175146989	175148195	(6390064)	+	L1MC3	LINE/L1	5848	7134	(1069)	3302877
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
284	25.4	4.2	4.2	chr6	2227042	2227160	(168578819)	+	L1ME4a	LINE/L1	6003	6121	(3)	3317135
22	12.0	0.0	2.6	chr6	2227184	2227221	(168578758)	+	(AT)n	Simple_repeat	1	38	(0)	3317136
997	25.5	10.6	1.2	chr6	4441138	4441462	(166364517)	C	MLT1I	LTR/ERVL-MaLR	(25)	386	28	3320436
2626	28.1	2.7	3.7	chr6	4441464	4442256	(166363723)	C	L2	LINE/L2	(2479)	940	156	3320435
17	9.7	2.9	2.8	chr6	5026336	5026370	(165779609)	+	G-rich	Low_complexity	1	36	(0)	3321377
14867	12.1	2.6	1.1	chr6	6104638	6105794	(164700185)	C	L1PREC2	LINE/L1	(3970)	4185	2995	3322994
425	11.4	17.8	0.0	chr6	6105790	6105877	(164700102)	C	L1PREC2	LINE/L1	(6467)	1688	1582	3322994
1278	16.8	0.0	2.6	chr6	6105876	6106107	(164699872)	C	L1PREC2	LINE/L1	(7923)	232	7	3322994
11839	16.3	9.1	2.2	chr6	8035539	8038504	(162767475)	+	L1MA4	LINE/L1	2468	5644	(838)	3326053
2042	13.4	0.3	0.7	chr6	10634713	10635011	(160170968)	C	AluSx	SINE/Alu	(1)	311	14	3329887
15289	17.6	1.1	2.8	chr6	12493662	12495530	(158310449)	+	L1PA13	LINE/L1	26	1863	(4922)	3332783
2275	11.3	0.0	0.3	chr6	12495531	12495831	(158310148)	+	AluSx	SINE/Alu	5	304	(8)	3332784
238	27.0	0.0	0.0	chr6	12539663	12539725	(158266254)	C	L2a	LINE/L2	(7)	3419	3357	3332837
4476	8.2	1.9	4.0	chr6	13828808	13829899	(156976080)	C	MER11A	LTR/ERVK	(0)	1266	2	3334994
2160	9.2	1.0	6.8	chr6	15342926	15343250	(155462729)	+	AluSq2	SINE/Alu	1	306	(7)	3337818
2230	10.1	0.7	0.0	chr6	17806598	17806883	(152999096)	+	AluSx	SINE/Alu	1	288	(24)	3341849
4795	9.0	2.0	3.6	chr6	17806891	17807920	(152998059)	+	MER11A	LTR/ERVK	1	1266	(0)	3341850
14532	16.1	4.0	0.7	chr6	19202863	19206136	(151599843)	C	L1PA13	LINE/L1	(3283)	3483	92	3344114
290	30.5	2.5	0.0	chr6	19450605	19450722	(151355257)	C	LTR33A	LTR/ERVL	(3)	517	397	3344450
16	12.2	0.0	0.0	chr6	19450954	19450976	(151355003)	+	(A)n	Simple_repeat	1	23	(0)	3344451
2396	7.6	4.6	0.0	chr6	19450977	19451306	(151354673)	C	L1PA12	LINE/L1	(11)	6157	5812	3344452
455	27.3	13.3	2.8	chr6	20534064	20534278	(150271701)	+	MIRb	SINE/MIR	2	242	(26)	3346237
4227	18.0	9.1	5.2	chr6	27641056	27641991	(143163988)	+	L1MB1	LINE/L1	4145	5156	(984)	3357277
2178	12.1	1.0	0.3	chr6	27894136	27894440	(142911539)	C	AluSg4	SINE/Alu	(3)	307	1	3357785
9668	9.5	9.6	0.4	chr6	28948926	28950356	(141855623)	C	LTR12C	LTR/ERV1	(0)	1579	3	3359524
849	18.1	2.0	0.7	chr6	34324420	34324568	(136481411)	C	AluJr4	SINE/Alu	(25)	287	137	3368123
522	20.4	5.3	6.0	chr6	34905482	34905632	(135900347)	C	MIRb	SINE/MIR	(14)	254	105	3369446
14	27.2	0.0	0.0	chr6	36436083	36436126	(134369853)	+	A-rich	Low_complexity	1	44	(0)	3372512
464	31.3	14.5	8.2	chr6	36436127	36436774	(134369205)	C	L2b	LINE/L2	(420)	2999	2304	3372500
1350	27.8	5.5	9.8	chr6	36657135	36657494	(134148485)	+	MER21C	LTR/ERVL	474	828	(110)	3373022
3879	12.2	7.2	6.0	chr6	38699152	38700211	(132105768)	+	MER11A	LTR/ERVK	1	1067	(4)	3376816
323	25.5	10.9	0.0	chr6	38702333	38702430	(132103549)	+	MIR3	SINE/MIR	97	206	(2)	3376821
22011	12.3	2.2	1.2	chr6	40973279	40979977	(129826002)	C	L1PREC2	LINE/L1	(3)	6777	13	3380412
12	12.2	3.7	0.0	chr6	41099658	41099684	(129706295)	+	(GAAT)n	Simple_repeat	1	28	(0)	3380620
257	29.9	2.0	10.0	chr6	41811953	41812081	(128993898)	+	MER5A1	DNA/hAT-Charlie	12	129	(37)	3381857
2426	7.7	0.3	0.0	chr6	41812082	41812378	(128993601)	C	AluSp	SINE/Alu	(15)	298	1	3381858
49	4.0	0.0	0.0	chr6	45922808	45922858	(124883121)	+	(AG)n	Simple_repeat	1	51	(0)	3389388
11377	19.2	1.6	1.1	chr6	48840026	48843314	(121962665)	C	L1PREC2	LINE/L1	(2880)	5261	1954	3393648
3255	17.8	3.7	0.8	chr6	53311279	53311885	(117494094)	+	L1MB7	LINE/L1	5445	6069	(115)	3399979
303	34.0	0.9	0.0	chr6	53940998	53941103	(116864876)	+	L1MEd	LINE/L1	542	648	(6438)	3400953
254	20.0	7.1	0.0	chr6	53941110	53941174	(116864805)	C	Kanga1d	DNA/TcMar-Tc2	(531)	78	9	3400948
7453	17.9	2.0	1.3	chr6	65903848	65905321	(104900658)	+	L1PREC2	LINE/L1	2809	4297	(3844)	3413684
4606	9.6	3.8	3.2	chr6	67457992	67459023	(103346956)	C	MER11A	LTR/ERVK	(0)	1266	1	3415538
1496	13.4	0.4	3.6	chr6	67459025	67459271	(103346708)	+	MSTA	LTR/ERVL-MaLR	190	428	(0)	3415537
5772	14.6	2.2	0.2	chr6	68126403	68127326	(102678653)	C	L1PA12	LINE/L1	(4375)	2606	1664	3416328
12471	16.2	2.5	1.7	chr6	73051165	73055082	(97750897)	+	L1PA15	LINE/L1	1059	5002	(1764)	3422680
407	31.0	6.5	6.0	chr6	73753951	73754132	(97051847)	C	L2c	LINE/L2	(76)	3311	3129	3424180
8720	17.0	2.1	0.6	chr6	73927056	73928948	(96877031)	+	L1PA13	LINE/L1	1162	3084	(3682)	3424399
4399	9.4	1.0	3.3	chr6	79890738	79891777	(90914202)	C	MER11A	LTR/ERVK	(0)	1266	1	3431922
11026	14.5	1.2	2.0	chr6	79965586	79968922	(90837057)	+	L1PREC2	LINE/L1	2584	5767	(2374)	3432012
3469	12.4	7.7	2.8	chr6	80294133	80295197	(90510782)	+	MER11A	LTR/ERVK	1	1236	(0)	3432464
6333	16.0	4.6	0.6	chr6	83294415	83295512	(87510467)	+	L1PREC2	LINE/L1	2080	3223	(4932)	3436333
935	9.4	0.0	0.0	chr6	83295513	83295629	(87510350)	C	AluSq2	SINE/Alu	(16)	297	181	3436334
513	24.5	20.7	1.5	chr6	87079021	87079285	(83726694)	C	Charlie17b	DNA/hAT-Charlie	(616)	588	260	3441021
425	28.6	5.8	4.0	chr6	87079493	87079765	(83726214)	C	Tigger20a	DNA/TcMar-Tigger	(573)	400	123	3441019
360	13.7	16.1	0.0	chr6	89127712	89127784	(81678195)	C	MER3	DNA/hAT-Charlie	(0)	209	123	3444236
3652	7.9	2.9	3.4	chr6	89127790	89128852	(81677127)	+	MER11A	LTR/ERVK	1	1266	(0)	3444237
9238	17.0	2.8	3.0	chr6	102015461	102016459	(68789520)	+	L1PA13	LINE/L1	1057	2059	(4726)	3461057
4558	9.9	2.8	3.6	chr6	103092038	103093078	(67712901)	+	MER11A	LTR/ERVK	1	1266	(0)	3462326
2584	16.6	4.1	10.9	chr6	106277365	106277532	(64528447)	C	Tigger6a	DNA/TcMar-Tigger	(6)	1077	912	3466645
2131	14.4	0.3	0.0	chr6	106277533	106277830	(64528149)	+	AluSz6	SINE/Alu	1	299	(13)	3466646
305	28.4	8.3	3.1	chr6	111566193	111566352	(59239627)	C	MIRc	SINE/MIR	(97)	171	3	3475842
11363	10.6	0.3	0.1	chr6	112608461	112610036	(58195943)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3477329
18715	14.8	1.6	1.6	chr6	113113844	113119248	(57686731)	+	L1PA15	LINE/L1	1304	6692	(0)	3477997
320	26.7	4.2	0.0	chr6	113189925	113190014	(57615965)	+	MER113A	DNA/hAT-Charlie	217	310	(4)	3478092
4844	8.6	3.6	1.9	chr6	115402380	115403400	(55402579)	C	MER11A	LTR/ERVK	(0)	1266	1	3481264
346	32.2	11.2	4.0	chr6	115403402	115404197	(55401782)	C	L1MC5a	LINE/L1	(2925)	3221	2362	3481260
14347	13.9	3.2	2.0	chr6	117346997	117351825	(53454154)	C	L1MC1	LINE/L1	(1430)	4891	1	3483757
1823	16.7	0.3	4.8	chr6	117598079	117598390	(53207589)	+	AluJo	SINE/Alu	3	300	(12)	3484116
2034	13.6	7.0	3.5	chr6	117598391	117598472	(53207507)	+	L1MA5	LINE/L1	5948	6029	(271)	3484115
1530	15.5	8.9	6.0	chr6	117598475	117598789	(53207190)	C	MER1B	DNA/hAT-Charlie	(0)	339	15	3484117
828	31.8	14.8	2.1	chr6	119090124	119090541	(51715438)	C	LTR16E1	LTR/ERVL	(58)	480	1	3486099
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
457	28.7	3.2	2.0	chr6	121687877	121688029	(49117950)	C	MIR	SINE/MIR	(61)	201	47	3489444
2092	14.9	1.2	3.2	chr6	121688033	121688378	(49117601)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3489446
2017	19.9	4.5	0.5	chr6	122437917	122438321	(48367658)	+	MSTA	LTR/ERVL-MaLR	1	422	(6)	3490411
347	8.3	0.0	0.0	chr6	122438328	122438375	(48367604)	+	MSTA-int	LTR/ERVL-MaLR	1	48	(1603)	3490411
3545	10.8	10.8	0.5	chr6	122438376	122438981	(48366998)	+	L1PA14	LINE/L1	1595	2270	(4419)	3490412
2771	8.2	2.2	0.0	chr6	123883959	123884350	(46921629)	C	L1PA13	LINE/L1	(6)	6157	5757	3492299
241	9.4	0.0	0.0	chr6	123884351	123884382	(46921597)	+	MSTA	LTR/ERVL-MaLR	395	426	(0)	3492296
7938	21.6	4.6	3.0	chr6	126223468	126225578	(44580401)	C	L1PA15	LINE/L1	(4327)	2458	285	3495405
535	29.8	1.9	1.2	chr6	129490234	129490393	(41315586)	C	MIRb	SINE/MIR	(99)	169	9	3499515
2229	10.1	3.6	0.0	chr6	133280399	133280694	(37525285)	C	AluSc8	SINE/Alu	(4)	307	1	3505032
2078	17.2	1.5	2.0	chr6	133280697	133281105	(37524874)	C	L1MB8	LINE/L1	(5)	6173	5767	3505033
20459	16.3	3.5	2.7	chr6	133798346	133801236	(37004743)	C	L1PREC2	LINE/L1	(3861)	4280	2	3505711
12464	21.4	4.7	2.7	chr6	139785953	139789661	(31016318)	C	L1PA15	LINE/L1	(2974)	3792	1	3515216
11854	19.6	4.0	1.2	chr6	141887289	141890343	(28915636)	+	L1PA15	LINE/L1	753	3925	(2841)	3517828
13217	14.8	1.9	0.7	chr6	142505316	142507644	(28298335)	C	L1PREC2	LINE/L1	(4439)	3716	835	3518611
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
8849	25.4	4.1	4.3	chr6	145582480	145584928	(25221051)	C	L1PA15	LINE/L1	(4341)	2444	1	3522949
1569	23.6	9.7	0.9	chr6	146288008	146288460	(24517519)	+	MLT1D-int	LTR/ERVL-MaLR	1	497	(874)	3523859
2358	11.2	0.0	0.0	chr6	146288493	146288805	(24517174)	C	AluSq2	SINE/Alu	(0)	313	1	3523860
2256	23.1	8.7	7.0	chr6	146647119	146648220	(24157759)	C	LTR38-int	LTR/ERV1	(2506)	4170	2556	3524305
367	28.7	9.7	5.3	chr6	149302164	149302369	(21503610)	+	L1ME4a	LINE/L1	5892	6107	(17)	3528216
524	26.9	14.7	7.1	chr6	149302461	149302803	(21503176)	+	LTR16B2	LTR/ERVL	33	413	(50)	3528217
3479	12.7	0.0	7.7	chr6	149302804	149303373	(21502606)	+	MER1A	DNA/hAT-Charlie	4	529	(0)	3528218
16	11.7	3.6	0.0	chr6	153057181	153057208	(17748771)	+	(AT)n	Simple_repeat	1	29	(0)	3534387
500	33.2	4.3	5.8	chr6	153057441	153057533	(17748446)	+	MIR	SINE/MIR	5	104	(158)	3534388
3299	12.1	8.1	0.0	chr6	153057534	153058019	(17747960)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3534389
12	15.8	0.0	3.3	chr6	157071509	157071538	(13734441)	+	A-rich	Low_complexity	1	30	(0)	3540390
17	8.0	0.0	0.0	chr6	157240914	157240940	(13565039)	+	(GGGA)n	Simple_repeat	1	27	(0)	3540589
432	26.5	10.5	0.6	chr6	157278425	157278595	(13527384)	+	MER115	DNA/hAT-Tip100	192	381	(312)	3540661
20876	17.4	2.0	3.9	chr6	157582197	157584399	(13221580)	C	L1PA15	LINE/L1	(3974)	4181	2006	3541130
1979	20.8	9.2	4.7	chr6	157781854	157782412	(13023567)	+	MER34A1	LTR/ERV1	1	587	(0)	3541461
335	30.6	15.7	3.4	chr6	158524837	158525442	(12280537)	+	L2c	LINE/L2	2685	3386	(1)	3542666
17803	14.5	3.9	1.7	chr6	159515213	159521846	(11284133)	C	L1PREC2	LINE/L1	(2)	8153	6	3544168
23549	9.2	2.1	0.5	chr6	160741668	160746893	(10059086)	C	L1PREC2	LINE/L1	(3)	8152	2833	3545738
3039	10.6	7.3	3.0	chr6	163590193	163590688	(7215291)	+	LTR12F	LTR/ERV1	1	519	(0)	3549654
31	0.0	0.0	0.0	chr6	167036798	167036826	(3769153)	+	(TTTTGT)n	Simple_repeat	1	29	(0)	3553951
2018	15.1	1.1	0.4	chr6	167036827	167037104	(3768875)	C	AluSx	SINE/Alu	(31)	281	2	3553952
10641	11.0	5.3	0.8	chr7	7210965	7212527	(152133446)	C	HUERS-P3b-int	LTR/ERV1	(7)	7411	5775	3570786
10184	17.9	5.3	0.7	chr7	8068367	8069691	(151276282)	C	L1PA15	LINE/L1	(4734)	3421	2025	3572013
1395	28.6	6.1	5.0	chr7	13454799	13455302	(145890671)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	3	3578777
917	23.1	11.3	0.7	chr7	15044309	15044617	(144301356)	C	L1M5	LINE/L1	(2300)	3846	3501	3580771
3615	20.1	6.4	1.4	chr7	15044639	15045560	(144300413)	C	L1MB8	LINE/L1	(5)	6173	5222	3580772
11005	16.9	3.8	3.0	chr7	17446248	17450571	(141895402)	C	L1PREC2	LINE/L1	(2211)	5930	1	3583903
20	11.3	0.0	0.0	chr7	19115861	19115889	(140230084)	+	(A)n	Simple_repeat	1	29	(0)	3586146
15186	22.7	1.6	1.3	chr7	19650001	19653807	(139692166)	+	L1PREC2	LINE/L1	571	4352	(3789)	3586750
12	20.4	8.6	1.6	chr7	25180092	25180149	(134165824)	+	(GGCAGG)n	Simple_repeat	1	63	(0)	3595065
21	23.8	1.1	6.6	chr7	25180367	25180462	(134165511)	+	(GCCCC)n	Simple_repeat	1	90	(0)	3595066
334	23.5	1.7	10.2	chr7	25995358	25995485	(133350488)	C	L2c	LINE/L2	(25)	3362	3246	3596237
560	27.0	12.1	1.7	chr7	26079162	26079398	(133266575)	+	MIRb	SINE/MIR	4	268	(0)	3596376
1214	23.2	10.2	0.9	chr7	26278398	26278745	(133067228)	C	Zaphod	DNA/hAT-Tip100	(3367)	664	281	3596743
300	28.9	6.2	0.0	chr7	26278799	26278888	(133067085)	+	Charlie15b	DNA/hAT-Charlie	151	246	(815)	3596754
2169	24.5	10.0	4.1	chr7	34175586	34175882	(125170091)	C	L1MDa	LINE/L1	(5318)	1315	1001	3608925
1781	18.3	2.3	5.5	chr7	34175883	34176281	(125169692)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	3	3608927
12964	18.0	1.1	2.4	chr7	36482106	36483664	(122862309)	C	L1PA15	LINE/L1	(4770)	1919	117	3612370
2539	6.2	0.0	0.7	chr7	40531669	40531973	(118814000)	C	AluY	SINE/Alu	(8)	303	1	3618600
6874	17.5	3.8	2.0	chr7	43702579	43706082	(115639891)	C	L1PA15	LINE/L1	(2710)	4056	500	3623013
13	14.2	0.0	5.7	chr7	43869590	43869624	(115476349)	+	(GGCGG)n	Simple_repeat	1	35	(0)	3623322
198	13.8	0.0	0.0	chr7	43870252	43870280	(115475693)	+	MIRb	SINE/MIR	22	50	(218)	3623323
3126	20.2	6.9	7.4	chr7	47745349	47746162	(111599811)	C	L1ME1	LINE/L1	(34)	6145	5335	3629015
2219	21.1	1.2	1.0	chr7	48259866	48260345	(111085628)	C	L1PA16	LINE/L1	(4768)	3387	2907	3629692
585	12.9	1.2	0.0	chr7	48260345	48260449	(111085524)	C	L1P4	LINE/L1	(537)	5617	5511	3629694
185	32.4	7.1	1.9	chr7	51290310	51290416	(108055557)	+	L3b	LINE/CR1	4370	4482	(750)	3633435
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2325	11.8	0.0	0.6	chr7	73849830	73850142	(85495831)	+	AluSz6	SINE/Alu	2	312	(0)	3665628
223	29.3	47.9	0.0	chr7	73850229	73850415	(85495558)	+	L2b	LINE/L2	2788	3067	(308)	3665627
729	13.8	0.0	3.7	chr7	73850417	73850525	(85495448)	C	AluJb	SINE/Alu	(116)	196	92	3665629
13488	19.7	2.7	2.6	chr7	79015841	79019201	(80326772)	+	L1PA15	LINE/L1	58	3418	(3348)	3676221
3462	17.2	2.4	5.0	chr7	86292969	86293517	(73052456)	C	L1M3	LINE/L1	(958)	5182	4637	3685774
3589	14.1	9.8	2.8	chr7	92442577	92443686	(66902287)	C	MER11A	LTR/ERVK	(0)	1236	1	3693898
11727	15.4	2.0	0.2	chr7	93029834	93031390	(66314583)	+	L1PREC2	LINE/L1	883	2473	(4312)	3694748
17294	11.9	2.0	1.4	chr7	94185369	94189631	(65156342)	C	L1PREC2	LINE/L1	(1308)	5458	1175	3696268
8464	15.5	1.3	3.5	chr7	95705734	95706331	(63639642)	+	L1PREC2	LINE/L1	2736	3332	(4823)	3698376
56	9.4	1.7	5.1	chr7	97369411	97369518	(61976455)	+	(TTA)n	Simple_repeat	1	104	(0)	3700676
797	24.8	11.0	1.7	chr7	97369521	97369815	(61976158)	C	MLT2B1	LTR/ERVL	(175)	345	20	3700669
2440	9.1	0.0	1.6	chr7	105326780	105327086	(54018887)	+	AluSq2	SINE/Alu	1	302	(11)	3715541
1337	20.2	3.3	1.8	chr7	105327188	105327459	(54018514)	+	MER58B	DNA/hAT-Charlie	66	341	(0)	3715542
322	30.0	7.6	7.3	chr7	105327498	105327733	(54018240)	+	L2a	LINE/L2	3148	3425	(1)	3715539
12635	10.2	0.6	0.5	chr7	106900200	106902336	(52443637)	C	L1PREC2	LINE/L1	(3632)	4509	2366	3718237
328	28.2	10.2	6.9	chr7	112351840	112352056	(46993917)	+	MLT1K	LTR/ERVL-MaLR	22	246	(349)	3725660
579	31.9	8.6	1.9	chr7	113165730	113166017	(46179956)	C	L2a	LINE/L2	(0)	3426	3104	3726801
4575	6.6	1.0	0.5	chr7	113166044	113166639	(46179334)	C	L1PA7	LINE/L1	(13)	6141	5543	3726802
2611	10.5	0.8	1.3	chr7	116245719	116246093	(43099880)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3730786
201	33.7	10.2	9.5	chr7	116246094	116246258	(43099715)	+	L2b	LINE/L2	2578	2735	(684)	3730784
475	34.6	7.3	10.3	chr7	116246335	116247040	(43098933)	+	L2b	LINE/L2	2726	3426	(0)	3730784
358	33.2	7.0	6.6	chr7	117044615	117044753	(42301220)	C	MIRb	SINE/MIR	(105)	163	24	3732004
2105	26.9	9.1	1.8	chr7	117044756	117045791	(42300182)	+	L2a	LINE/L2	2293	3426	(0)	3732006
1699	11.2	7.5	0.0	chr7	131390538	131390832	(27955141)	C	L1MA9	LINE/L1	(5)	6307	5989	3752722
361	30.7	16.0	0.6	chr7	131859490	131859653	(27486320)	+	MIR3	SINE/MIR	15	208	(0)	3753581
3508	13.5	0.6	2.0	chr7	132009653	132010204	(27335769)	C	L1PBa	LINE/L1	(5700)	1163	620	3753800
868	19.8	0.6	0.0	chr7	132010190	132010351	(27335622)	C	L1PBa	LINE/L1	(6668)	195	33	3753800
7212	25.6	4.7	5.0	chr7	132010403	132013156	(27332817)	C	L1ME2	LINE/L1	(1385)	5556	2805	3753799
223	20.7	3.3	3.3	chr7	134569079	134569138	(24776835)	C	L2c	LINE/L2	(72)	3315	3256	3757689
22854	14.1	2.6	2.2	chr7	135105370	135110782	(24235191)	C	L1PREC2	LINE/L1	(1130)	7011	17	3758474
8703	16.1	4.7	1.9	chr7	137492285	137495070	(21850903)	+	L1PA15	LINE/L1	9	3029	(3737)	3762004
1526	27.4	12.1	7.2	chr7	141432588	141433610	(17912363)	C	HAL1	LINE/L1	(1427)	1080	1	3769280
229	31.7	1.0	3.7	chr7	141433694	141433801	(17912172)	+	MIRc	SINE/MIR	97	201	(61)	3769281
12	25.6	3.4	3.3	chr7	148884434	148884494	(10461479)	+	(GCGCGC)n	Simple_repeat	1	61	(0)	3779540
771	29.6	7.7	2.0	chr7	151740122	151740559	(7605414)	+	LTR33	LTR/ERVL	49	513	(2)	3783976
4392	8.1	2.4	2.4	chr7	156696985	156698014	(2647959)	C	MER11A	LTR/ERVK	(0)	1266	1	3791234
7853	9.5	1.4	0.4	chr7	156698015	156698961	(2647012)	C	THE1B-int	LTR/ERVL-MaLR	(202)	1378	417	3791235
2218	11.8	0.0	0.0	chr7	157267142	157267446	(2078527)	+	AluSg	SINE/Alu	1	305	(5)	3792164
14	15.9	2.7	2.6	chr7	157267865	157267901	(2078072)	+	(TCCT)n	Simple_repeat	1	38	(0)	3792165
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1348	27.0	11.9	4.5	chr7	158676043	158676745	(669228)	+	L1MC5	LINE/L1	8540	9301	(3)	3793527
313	29.1	14.3	3.8	chr7	158677182	158677574	(668399)	+	HAL1ME	LINE/L1	564	1004	(1461)	3793528
3176	5.0	5.0	0.6	chr8	8134984	8135452	(137003184)	C	MER11A	LTR/ERVK	(688)	578	1	3804227
3864	8.7	7.7	1.7	chr8	13675989	13676966	(131461670)	C	MER11A	LTR/ERVK	(0)	1266	1	3813041
1046	15.1	1.0	6.0	chr8	13676969	13677186	(131461450)	+	MSTB2	LTR/ERVL-MaLR	248	454	(3)	3813040
3696	8.9	2.5	2.5	chr8	17572839	17573907	(127564729)	+	MER11A	LTR/ERVK	1	1266	(0)	3818385
3343	19.4	0.9	5.0	chr8	26144176	26144835	(118993801)	C	Tigger17a	DNA/TcMar-Tigger	(21)	633	1	3832172
15666	15.4	2.2	2.0	chr8	33953026	33958839	(111179797)	C	L1PREC2	LINE/L1	(1052)	7089	4	3845489
2321	9.5	0.7	0.0	chr8	38366416	38366711	(106771925)	C	AluSc	SINE/Alu	(11)	298	1	3852160
981	19.0	0.5	0.0	chr8	38366759	38366942	(106771694)	C	MER3	DNA/hAT-Charlie	(24)	185	1	3852161
266	33.1	8.1	3.1	chr8	38367169	38367296	(106771340)	+	MIR3	SINE/MIR	30	164	(44)	3852162
16713	15.7	2.1	1.7	chr8	39191943	39195268	(105943368)	C	L1PA13	LINE/L1	(3733)	3033	1	3853625
626	29.2	14.3	3.3	chr8	42800902	42800972	(102337664)	C	HAL1	LINE/L1	(2431)	76	3	3859520
228	23.8	5.6	3.5	chr8	42800973	42801059	(102337577)	C	MLT1L	LTR/ERVL-MaLR	(306)	304	216	3859522
1247	26.6	10.7	5.8	chr8	52687348	52687878	(92450758)	+	MLT1F2	LTR/ERVL-MaLR	1	560	(0)	3868486
330	29.2	13.3	2.1	chr8	52687879	52687910	(92450726)	+	MIRc	SINE/MIR	161	193	(75)	3868485
4273	9.7	2.9	3.4	chr8	52687913	52688935	(92449701)	+	MER11A	LTR/ERVK	1	1266	(0)	3868487
16817	15.1	1.2	2.0	chr8	53212064	53215611	(91923025)	C	L1PREC2	LINE/L1	(3237)	3529	13	3869220
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
15032	18.4	3.0	0.6	chr8	57733142	57738598	(87400038)	C	L1PA15	LINE/L1	(1)	6784	693	3875677
8697	19.7	2.5	1.5	chr8	57758930	57761436	(87377200)	+	L1PA13	LINE/L1	950	3480	(3286)	3875706
761	26.3	11.5	11.5	chr8	57810911	57811241	(87327395)	C	LTR16E1	LTR/ERVL	(1)	537	207	3875777
19746	13.8	3.0	0.7	chr8	59224928	59229738	(85908898)	+	L1PA14	LINE/L1	561	5508	(2633)	3877638
21716	15.5	2.3	1.7	chr8	65351830	65356873	(79781763)	C	L1PREC2	LINE/L1	(1732)	6409	2	3885666
2145	6.4	0.4	0.0	chr8	66248891	66249154	(78889482)	+	HERVK11-int	LTR/ERVK	7689	7953	(0)	3887061
3883	11.7	4.5	3.3	chr8	66249155	66250113	(78888523)	+	MER11A	LTR/ERVK	1	1071	(0)	3887061
4345	18.4	4.6	3.3	chr8	70358081	70359738	(74778898)	+	L1MB5	LINE/L1	4482	6168	(6)	3893668
18997	15.9	3.5	1.2	chr8	70802236	70804333	(74334303)	C	L1PA15	LINE/L1	(3758)	2915	769	3894375
21942	13.5	0.9	1.5	chr8	74473050	74479095	(70659541)	C	L1PA13	LINE/L1	(750)	6016	13	3899711
2339	7.8	0.0	1.1	chr8	76471331	76471649	(68666987)	C	AluY	SINE/Alu	(0)	311	1	3902276
12957	21.9	3.8	2.3	chr8	76471650	76473415	(68665221)	C	L1PA15	LINE/L1	(4971)	1814	11	3902275
2252	19.3	2.7	0.9	chr8	81346367	81346805	(63791831)	C	MER65C	LTR/ERV1	(0)	461	15	3909149
351	15.7	0.5	0.0	chr8	81346808	81346874	(63791762)	C	L1MB7	LINE/L1	(896)	5250	5181	3909148
20687	14.0	2.1	1.1	chr8	83623527	83630188	(61508448)	C	L1PREC2	LINE/L1	(1)	8154	61	3912082
1889	15.0	1.0	2.0	chr8	83630189	83630494	(61508142)	+	MER1B	DNA/hAT-Charlie	37	339	(0)	3912083
1960	14.6	0.6	0.0	chr8	83630542	83630857	(61507779)	+	L1PREC2	LINE/L1	2995	3312	(4843)	3912084
9361	23.1	1.9	5.6	chr8	83774421	83776778	(61361858)	+	L1PA15	LINE/L1	12	2281	(4504)	3912281
7402	19.5	4.2	1.4	chr8	85148649	85150243	(59988393)	+	L1PA13	LINE/L1	1173	2813	(3972)	3914120
320	34.2	6.3	7.0	chr8	100738533	100738931	(44399705)	C	L2	LINE/L2	(669)	2750	2355	3937368
3206	13.3	0.0	7.1	chr8	102988987	102989173	(42149463)	+	LOR1a	LTR/ERV1	72	231	(266)	3941537
1787	16.5	5.0	4.2	chr8	102989174	102989508	(42149128)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	3941540
3206	13.3	0.0	7.1	chr8	102989509	102989779	(42148857)	+	LOR1a	LTR/ERV1	232	497	(0)	3941537
30	0.0	0.0	0.0	chr8	102989804	102989831	(42148805)	+	(TGT)n	Simple_repeat	1	28	(0)	3941541
1208	16.8	0.0	2.5	chr8	102989834	102990030	(42148606)	C	AluJb	SINE/Alu	(29)	283	92	3941542
16596	21.5	2.7	3.1	chr8	111691273	111695220	(33443416)	C	L1PA15	LINE/L1	(2889)	5252	28	3953832
19035	15.2	1.8	1.0	chr8	114888798	114894617	(30244019)	C	L1PREC2	LINE/L1	(344)	7816	1948	3957950
15453	21.1	5.2	2.3	chr8	116270195	116273703	(28864933)	C	L1PA15	LINE/L1	(3190)	3576	13	3959798
2510	10.9	0.3	0.0	chr8	120101633	120101943	(25036693)	C	AluSz	SINE/Alu	(0)	312	1	3966077
3410	15.3	1.2	6.4	chr8	120101944	120102609	(25036027)	C	L1P4e	LINE/L1	(4881)	3274	2653	3966076
296	32.7	4.6	5.2	chr8	122930065	122930238	(22208398)	+	MIRc	SINE/MIR	94	266	(2)	3970826
21935	10.4	2.0	0.8	chr8	122962136	122968007	(22170629)	C	L1PB1	LINE/L1	(6)	6861	913	3970896
311	18.8	5.9	0.0	chr8	123157591	123157654	(21980982)	C	L2b	LINE/L2	(15)	3360	3293	3971277
22	22.0	0.0	0.0	chr8	123157699	123157742	(21980894)	+	(AC)n	Simple_repeat	1	44	(0)	3971278
22	10.8	0.0	0.0	chr8	123158008	123158038	(21980598)	+	(T)n	Simple_repeat	1	31	(0)	3971279
12	21.1	2.9	0.0	chr8	123158108	123158141	(21980495)	+	(CTCCC)n	Simple_repeat	1	35	(0)	3971280
18955	14.7	2.3	0.8	chr8	124128949	124135471	(21003165)	+	L1PA15	LINE/L1	62	6685	(7)	3973152
11964	21.0	5.1	1.4	chr8	125838208	125841850	(19296786)	+	L1PREC2	LINE/L1	7	4610	(3531)	3976472
258	23.1	5.8	1.5	chr8	127976162	127976227	(17162409)	C	Plat_L3	LINE/CR1	(5)	3581	3513	3980522
276	36.2	3.5	2.4	chr8	127976415	127976581	(17162055)	C	Charlie15a	DNA/hAT-Charlie	(48)	176	8	3980523
440	33.4	10.0	0.9	chr8	139612784	139613127	(5525509)	+	L1MC4	LINE/L1	7442	7820	(222)	4000611
2423	10.3	0.0	0.0	chr8	140494616	140494925	(4643711)	C	AluSz	SINE/Alu	(0)	312	3	4002077
14	13.7	3.1	0.0	chr8	140495074	140495105	(4643531)	+	(CTCCC)n	Simple_repeat	1	33	(0)	4002078
1213	15.9	0.0	0.0	chr8	140495145	140495326	(4643310)	C	AluJo	SINE/Alu	(2)	310	129	4002079
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
13606	15.2	3.2	4.1	chr9	8049299	8053520	(130341197)	C	L1PREC2	LINE/L1	(1851)	4915	773	4020595
9061	16.9	2.6	2.0	chr9	13327520	13328859	(125065858)	+	L1M2	LINE/L1	3319	4646	(1497)	4027475
1094	16.3	1.5	0.0	chr9	13328861	13329062	(125065655)	C	L1M2	LINE/L1	(1268)	4875	4671	4027477
316	20.6	9.7	0.0	chr9	13329063	13329193	(125065524)	C	L1ME4a	LINE/L1	(20)	6104	5960	4027478
2777	9.1	1.2	3.2	chr9	14001345	14001673	(124393044)	C	HSMAR1	DNA/TcMar-Mariner	(951)	336	10	4028378
20	10.0	0.0	0.0	chr9	15694638	15694670	(122700047)	+	(ATCCA)n	Simple_repeat	1	33	(0)	4030971
239	31.1	8.6	0.9	chr9	15694748	15694854	(122699863)	+	L2	LINE/L2	2651	2766	(653)	4030969
707	21.2	3.8	0.7	chr9	15694898	15695049	(122699668)	+	MIR	SINE/MIR	99	255	(7)	4030972
13	16.2	0.0	0.0	chr9	18429110	18429137	(119965580)	+	(TATA)n	Simple_repeat	1	28	(0)	4034657
10220	13.7	4.4	0.4	chr9	32650541	32652253	(105742464)	+	L1PA14	LINE/L1	1592	3376	(4165)	4053999
229	9.3	12.2	0.0	chr9	32652220	32652262	(105742455)	+	L1M1	LINE/L1	2359	2407	(5158)	4054000
21144	9.7	1.5	0.4	chr9	32652252	32656534	(105738183)	+	L1PA14	LINE/L1	3832	8156	(0)	4053999
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
7097	18.9	2.1	1.6	chr9	43001828	43002956	(95391761)	C	L1PREC2	LINE/L1	(4930)	3225	2081	4070847
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
185	30.4	8.9	1.1	chr9	68494780	68494872	(69899845)	C	MIRb	SINE/MIR	(36)	232	132	4079940
428	28.1	0.9	1.8	chr9	68494988	68495116	(69899601)	C	L2a	LINE/L2	(3)	3423	3246	4079941
1321	28.2	11.9	5.2	chr9	68495177	68495862	(69898855)	C	L4_B_Mam	LINE/RTE-X	(0)	4941	4204	4079942
574	29.9	9.0	2.1	chr9	72476845	72477124	(65917593)	+	MER102a	DNA/hAT-Charlie	30	330	(0)	4086608
7788	13.5	0.9	2.1	chr9	75565495	75566772	(62827945)	C	L1PA15	LINE/L1	(3920)	3011	1743	4091168
3558	7.5	1.1	0.0	chr9	75566773	75567225	(62827492)	C	LTR22A	LTR/ERVK	(0)	458	1	4091173
20180	15.4	4.4	1.4	chr9	75620177	75626283	(62768434)	C	L1PREC2	LINE/L1	(1819)	6322	14	4091251
18	15.0	0.0	7.7	chr9	77907358	77907409	(60487308)	+	GA-rich	Low_complexity	1	52	(0)	4094966
6041	6.3	12.4	6.5	chr9	78141702	78142795	(60251922)	+	MER11A	LTR/ERVK	1	1266	(0)	4095324
358	34.3	0.0	0.0	chr9	79404489	79404631	(58990086)	C	MER117	DNA/hAT-Charlie	(50)	147	5	4097212
1298	14.0	4.7	0.5	chr9	79675799	79676021	(58718696)	C	Tigger4a	DNA/TcMar-Tigger	(3)	233	1	4097584
23006	13.7	2.8	1.2	chr9	83550725	83556150	(54838567)	C	L1PA14	LINE/L1	(1738)	6403	1	4103083
13014	9.6	2.7	0.2	chr9	86000045	86003177	(52391540)	C	L1PREC2	LINE/L1	(2141)	6000	2787	4107144
558	25.8	15.4	1.9	chr9	87324285	87324497	(51070220)	+	MIR	SINE/MIR	6	252	(10)	4109294
12	11.9	0.0	6.5	chr9	87324890	87324920	(51069797)	+	(ATTA)n	Simple_repeat	1	31	(0)	4109295
474	26.8	17.2	3.5	chr9	87379178	87379521	(51015196)	+	L1ME4b	LINE/L1	472	844	(48)	4109367
43	4.5	0.0	0.0	chr9	87379522	87379567	(51015150)	+	(TC)n	Simple_repeat	1	46	(0)	4109368
504	21.8	5.0	2.2	chr9	87569084	87569219	(50825498)	C	MER5B	DNA/hAT-Charlie	(0)	178	39	4109705
329	28.9	5.9	1.5	chr9	87569259	87569388	(50825329)	C	MER5A	DNA/hAT-Charlie	(2)	187	52	4109706
185	34.1	1.1	9.0	chr9	90904618	90904717	(47490000)	+	MamRTE1	LINE/RTE-BovB	2680	2771	(1041)	4114437
11054	22.1	5.2	5.7	chr9	90904718	90906293	(47488424)	+	HERVK13-int	LTR/ERVK	2151	3773	(4343)	4114436
11188	14.4	0.9	0.9	chr9	96793326	96795184	(41599533)	C	L1PREC2	LINE/L1	(3913)	2872	1014	4123498
858	14.6	3.0	0.0	chr9	107542247	107542376	(30852341)	+	AluSz	SINE/Alu	1	134	(178)	4140980
289	5.1	0.0	0.0	chr9	107542394	107542432	(30852285)	C	MER44B	DNA/TcMar-Tigger	(120)	430	392	4140981
1617	19.9	3.6	0.3	chr9	107542431	107542748	(30851969)	C	Tigger7	DNA/TcMar-Tigger	(2094)	397	69	4140982
17	22.4	0.0	5.3	chr9	107542760	107542773	(30851944)	+	(TATT)n	Simple_repeat	1	14	(0)	4140983
794	20.3	0.0	0.0	chr9	107542774	107542906	(30851811)	C	FLAM_C	SINE/Alu	(10)	133	1	4140984
843	18.6	4.9	0.0	chr9	107936351	107936506	(30458211)	+	MLT1F2	LTR/ERVL-MaLR	1	164	(396)	4141904
1751	17.1	5.2	4.7	chr9	107936701	107937063	(30457654)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	4141905
4663	7.5	2.7	1.6	chr9	112399090	112400106	(25994611)	C	MER11A	LTR/ERVK	(0)	1266	1	4149752
718	23.0	1.1	6.5	chr9	112400107	112400306	(25994411)	+	L1ME3B	LINE/L1	5355	5543	(699)	4149736
2352	10.2	0.3	0.3	chr9	112656092	112656396	(25738321)	+	AluSz	SINE/Alu	2	306	(6)	4150249
1728	23.4	7.3	5.0	chr9	112656397	112656425	(25738292)	C	LTR38B	LTR/ERV1	(588)	22	1	4150248
313	27.2	10.4	8.6	chr9	112656761	112657104	(25737613)	C	L1M5	LINE/L1	(2680)	3466	3118	4150247
277	26.8	18.7	1.6	chr9	126367674	126367859	(12026858)	C	MIRb	SINE/MIR	(29)	239	15	4176324
2514	24.6	1.4	5.7	chr9	130788198	130788964	(7605753)	C	L1MC4	LINE/L1	(0)	8042	7310	4185799
12	23.4	2.5	0.0	chr9	130788969	130789008	(7605709)	+	(CTTTTTG)n	Simple_repeat	1	41	(0)	4185800
268	29.2	0.0	0.0	chr9	130789029	130789100	(7605617)	C	L1MC4	LINE/L1	(728)	7314	7243	4185799
1955	30.5	6.6	3.6	chr9	130789110	130790033	(7604684)	+	L1MEd	LINE/L1	278	1231	(5855)	4185801
2159	11.9	0.7	0.0	chr9	131370347	131370656	(7024061)	+	AluSx1	SINE/Alu	1	312	(0)	4186942
515	22.6	6.1	11.6	chr9	131370657	131370782	(7023935)	+	MIR	SINE/MIR	146	261	(1)	4186940
2043	13.3	4.4	0.0	chrX	19860294	19860639	(136180256)	+	L1MB4	LINE/L1	5813	6174	(6)	4392092
894	18.9	4.7	5.2	chrX	19860653	19861083	(136179812)	+	L1MC4a	LINE/L1	7383	7881	(1)	4392094
11570	18.7	1.3	1.7	chrX	21328002	21330647	(134710248)	+	L1PREC2	LINE/L1	169	2941	(3825)	4394350
625	21.7	6.9	4.7	chrX	22999670	22999838	(133041057)	+	MER96	DNA/hAT-Tip100	3	175	(0)	4396854
2338	11.4	0.3	0.0	chrX	39744935	39745242	(116295653)	C	AluSp	SINE/Alu	(4)	309	1	4421097
5455	21.2	2.1	6.3	chrX	43441639	43443017	(112597878)	C	L1PREC2	LINE/L1	(4436)	3727	1444	4427321
19739	16.0	3.9	2.2	chrX	43486184	43490661	(112550234)	+	L1PA13	LINE/L1	11	4585	(2181)	4427386
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
8086	16.1	1.5	0.9	chrX	55838785	55840651	(100200244)	C	L1PA13	LINE/L1	(4747)	2116	252	4447556
10680	22.6	2.0	1.2	chrX	55840640	55843300	(100197595)	C	L1PREC2	LINE/L1	(4953)	3202	245	4447558
1751	16.8	15.2	1.9	chrX	56924393	56924762	(99116133)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	4448647
18126	22.4	3.6	1.2	chrX	56924763	56928071	(99112824)	C	L1PREC2	LINE/L1	(4986)	3169	1	4448641
7876	20.8	1.5	2.5	chrX	63577496	63579127	(92461768)	+	L1PA13	LINE/L1	1144	2760	(4025)	4450274
4949	14.7	8.0	0.1	chrX	64312586	64313744	(91727151)	C	Tigger1	DNA/TcMar-Tigger	(815)	1603	353	4451172
9073	18.2	4.2	2.1	chrX	64313745	64315507	(91725388)	C	L1PA13	LINE/L1	(4974)	1811	10	4451174
7708	15.1	1.8	0.7	chrX	66243375	66244894	(89796001)	C	L1PA14	LINE/L1	(3706)	2967	1432	4453513
21457	13.0	0.5	1.5	chrX	67768640	67771754	(88269141)	+	L1PREC2	LINE/L1	873	3960	(4195)	4455270
2464	11.9	0.6	1.2	chrX	72100490	72100830	(83940065)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	4462710
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
16619	16.3	2.2	1.4	chrX	74145863	74149757	(81891138)	+	L1PREC2	LINE/L1	13	3939	(2827)	4465204
10317	21.7	3.4	3.4	chrX	75192106	75195880	(80845015)	C	L1PA13	LINE/L1	(3137)	3778	5	4466534
4530	26.1	8.2	2.5	chrX	75775241	75777195	(80263700)	C	L1PA13	LINE/L1	(4634)	2151	11	4467017
12354	25.1	2.4	2.7	chrX	77276450	77278663	(78762232)	+	L1PA16	LINE/L1	2312	4487	(3654)	4468156
9330	22.0	3.3	0.8	chrX	80946978	80949136	(75091759)	C	L1PA15	LINE/L1	(3664)	3102	922	4472374
14089	17.8	2.4	1.7	chrX	85323632	85327319	(70713576)	C	L1PA16	LINE/L1	(2911)	3855	139	4476891
13834	15.4	1.7	0.5	chrX	85985065	85987531	(70053364)	+	L1PA14	LINE/L1	1316	3867	(4288)	4477567
3194	20.5	4.0	1.0	chrX	86090886	86091570	(69949325)	C	L1PA13	LINE/L1	(4816)	1969	1264	4477730
962	23.7	0.0	2.3	chrX	86543030	86543245	(69497650)	+	L1PA14	LINE/L1	14	224	(6561)	4478184
7397	14.7	1.9	3.8	chrX	86543247	86543721	(69497174)	+	L1PA14	LINE/L1	1515	1971	(4811)	4478184
6306	27.4	5.3	3.7	chrX	86963032	86964608	(69076287)	+	L1PA15	LINE/L1	286	1888	(4897)	4478641
2979	8.8	0.2	2.1	chrX	86964609	86965038	(69075857)	+	L1PA7	LINE/L1	5733	6154	(0)	4478642
9253	20.3	5.9	1.7	chrX	99497274	99499478	(56541417)	+	L1PREC2	LINE/L1	1524	3831	(4326)	4493211
16142	15.8	3.5	1.5	chrX	103220154	103222935	(52817960)	+	L1PREC2	LINE/L1	1	2838	(3947)	4498305
23670	11.3	1.6	0.8	chrX	103936145	103940710	(52100185)	C	L1PA7	LINE/L1	(1488)	4973	416	4499358
42	4.5	0.0	0.0	chrX	103940711	103940757	(52100138)	+	(AAC)n	Simple_repeat	1	47	(0)	4499360
12740	15.7	0.8	2.4	chrX	103940758	103941575	(52099320)	C	L1PA7	LINE/L1	(6046)	415	9	4499358
2218	13.5	0.0	0.0	chrX	106066576	106066887	(49974008)	C	AluSq2	SINE/Alu	(1)	312	1	4502363
15518	16.8	2.1	3.4	chrX	106066888	106068839	(49972056)	C	L1PA13	LINE/L1	(4801)	1984	20	4502361
21123	12.6	2.1	1.0	chrX	106138882	106144226	(49896669)	+	L1PA13	LINE/L1	815	6260	(523)	4502425
18231	14.9	1.4	2.7	chrX	106566161	106570404	(49470491)	+	L1PREC2	LINE/L1	13	4225	(2541)	4502883
5728	22.8	8.0	1.9	chrX	109972995	109974387	(46066508)	C	L1MDa	LINE/L1	(5131)	1502	19	4507683
764	31.9	12.0	2.6	chrX	112362199	112362652	(43678243)	C	L2a	LINE/L2	(1)	3425	2924	4511341
13781	17.5	5.2	0.3	chrX	115992994	115995334	(40045561)	+	L1PA13	LINE/L1	1	2462	(4323)	4516196
14569	20.3	2.6	1.9	chrX	116057595	116059583	(39981312)	C	L1PA13	LINE/L1	(4762)	2023	13	4516257
8017	19.7	3.8	1.3	chrX	117299867	117301906	(38738989)	C	L1PA13	LINE/L1	(3581)	3185	1103	4517573
1251	17.8	0.4	4.7	chrX	122559473	122559708	(33481187)	+	L1PREC2	LINE/L1	7	232	(7923)	4525586
542	14.3	6.7	0.0	chrX	122559706	122559803	(33481092)	+	L1PREC2	LINE/L1	1581	1685	(6470)	4525586
7611	12.1	3.6	0.2	chrX	122559816	122561765	(33479130)	+	L1PREC2	LINE/L1	2985	5003	(3138)	4525586
276	32.4	2.2	4.3	chrX	123953540	123953726	(32087169)	C	MamRep605	LTR?	(116)	733	551	4527805
1530	14.6	15.7	6.1	chrX	123953757	123954036	(32086859)	C	AluJb	SINE/Alu	(0)	312	1	4527806
683	32.4	13.4	1.1	chrX	135497109	135497766	(20543129)	+	L2c	LINE/L2	2635	3387	(0)	4544439
180	23.1	0.0	2.5	chrX	135497918	135497957	(20542938)	+	MER5A	DNA/hAT-Charlie	129	167	(22)	4544440
394	23.0	12.4	0.2	chrX	135497986	135498114	(20542781)	C	L2a	LINE/L2	(1)	3386	3256	4544441
867	18.4	0.0	1.8	chrX	135498321	135498491	(20542404)	C	MER5B	DNA/hAT-Charlie	(3)	175	8	4544442
5047	21.1	2.8	2.2	chrX	140865516	140865687	(15175208)	+	L1PA15	LINE/L1	1133	1317	(5468)	4552903
27	0.0	0.0	0.0	chrX	140865688	140865713	(15175182)	+	(CCACTG)n	Simple_repeat	1	26	(0)	4552904
5047	21.1	2.8	2.2	chrX	140865714	140866740	(15174155)	+	L1PA15	LINE/L1	1318	2338	(4447)	4552903
787	27.3	7.1	5.6	chrX	143194044	143194408	(12846487)	+	LTR16	LTR/ERVL	76	489	(0)	4556212
601	22.9	8.9	0.0	chrX	143194411	143194554	(12846341)	C	MER5B	DNA/hAT-Charlie	(20)	158	1	4556213
1259	23.0	0.4	0.6	chrY	10958474	10959925	(46267490)	+	(CATTC)n	Satellite	1	1451	(0)	4588522
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638