2232	11.3	0.7	0.0	chr1	994042	994334	(247962088)	+	AluSz	SINE/Alu	1	295	(17)	1245
2047	14.3	0.8	4.0	chr1	994335	994401	(247962021)	+	MSTA	LTR/ERVL-MaLR	310	367	(61)	1244
2037	9.4	0.4	0.0	chr1	994402	994667	(247961755)	C	AluSx	SINE/Alu	(45)	267	1	1246
8006	4.6	1.6	0.0	chr1	1065545	1066494	(247889928)	C	LTR13A	LTR/ERVK	(0)	966	1	1331
1386	23.6	10.9	6.3	chr1	1858667	1859016	(247097406)	+	MER119	DNA/hAT-Charlie	31	411	(172)	2482
2156	12.6	0.3	0.0	chr1	1859017	1859317	(247097105)	C	AluSz	SINE/Alu	(6)	306	5	2483
1962	13.1	2.0	0.3	chr1	1954502	1954791	(247001631)	+	AluJb	SINE/Alu	1	295	(17)	2663
12	4.2	0.0	10.0	chr1	1955261	1955290	(247001132)	+	(GCAGG)n	Simple_repeat	1	30	(0)	2664
368	31.9	9.5	2.4	chr1	1994766	1995105	(246961317)	+	HAL1	LINE/L1	5	371	(2136)	2719
415	28.2	12.6	0.6	chr1	5664259	5664433	(243291989)	C	MIR	SINE/MIR	(16)	246	48	7060
1865	15.4	3.7	0.7	chr1	5782458	5782650	(243173772)	C	AluSz6	SINE/Alu	(100)	212	9	7263
1460	21.7	3.8	1.2	chr1	5782834	5783161	(243173261)	+	L1MB5	LINE/L1	5713	6045	(129)	7265
1130	13.3	10.6	0.0	chr1	6075720	6075930	(242880492)	C	L1MB4	LINE/L1	(0)	6180	5945	7646
882	18.5	2.8	0.0	chr1	6075938	6076110	(242880312)	+	MER58A	DNA/hAT-Charlie	47	224	(0)	7647
2256	9.9	2.6	0.7	chr1	6214624	6214926	(242741496)	C	AluSc	SINE/Alu	(0)	309	1	7845
281	22.4	1.5	0.0	chr1	6214945	6215011	(242741411)	C	HAL1	LINE/L1	(1245)	1262	1195	7843
2364	10.3	0.6	0.0	chr1	6215017	6215327	(242741095)	C	AluSp	SINE/Alu	(0)	313	1	7846
1911	11.6	2.9	0.4	chr1	7246671	7246938	(241709484)	C	AluSx1	SINE/Alu	(8)	304	30	9597
192	23.5	8.1	15.0	chr1	7961129	7961208	(240995214)	C	L2a	LINE/L2	(18)	3408	3335	10654
13	13.7	0.0	0.0	chr1	9201744	9201768	(239754654)	+	(CCCT)n	Simple_repeat	1	25	(0)	13138
50	0.0	1.9	1.9	chr1	9201769	9201821	(239754601)	+	(CCT)n	Simple_repeat	1	54	(0)	13139
24	18.8	0.0	3.5	chr1	9201823	9201880	(239754542)	+	(GCT)n	Simple_repeat	1	58	(0)	13140
2028	19.4	4.3	2.4	chr1	9495641	9496093	(239460329)	C	L1MC1	LINE/L1	(99)	6234	5773	13716
2145	11.1	1.0	0.3	chr1	9666867	9667163	(239289259)	C	AluSx	SINE/Alu	(13)	299	1	14116
895	18.4	0.0	0.0	chr1	9667177	9667312	(239289110)	+	AluJr	SINE/Alu	129	264	(48)	14117
2389	7.8	0.0	0.0	chr1	9667380	9667675	(239288747)	C	AluSc8	SINE/Alu	(15)	296	1	14118
2297	10.8	1.9	0.3	chr1	10014375	10014680	(238941742)	C	AluSx	SINE/Alu	(1)	311	1	14886
2352	22.2	4.6	5.6	chr1	10014681	10015065	(238941357)	+	MER21B	LTR/ERVL	450	909	(29)	14885
393	12.7	0.0	0.0	chr1	10233649	10233711	(238722711)	+	L1MB8	LINE/L1	6107	6169	(9)	15390
1556	7.0	23.8	0.0	chr1	10233712	10233941	(238722481)	C	AluSx1	SINE/Alu	(10)	302	1	15391
978	13.4	7.5	0.0	chr1	12208812	12208960	(236747462)	+	FRAM	SINE/Alu	1	161	(15)	19396
1446	12.0	1.3	3.9	chr1	12550198	12550430	(236405992)	C	AluJr	SINE/Alu	(13)	299	73	19965
12	17.6	2.4	4.7	chr1	12636835	12636876	(236319546)	+	G-rich	Low_complexity	1	43	(0)	20142
348	30.1	12.4	0.6	chr1	13488923	13489086	(235467336)	+	L1M5	LINE/L1	5633	5818	(306)	21502
437	20.2	15.1	10.2	chr1	13489378	13489553	(235466869)	C	MIR3	SINE/MIR	(3)	205	20	21503
189	28.9	13.5	1.1	chr1	17053234	17053324	(231903098)	C	MIRb	SINE/MIR	(39)	229	126	28579
381	26.0	11.7	9.5	chr1	17053579	17053778	(231902644)	+	MIRc	SINE/MIR	2	206	(62)	28580
753	31.9	10.1	2.5	chr1	17658604	17659005	(231297417)	C	L2a	LINE/L2	(12)	3414	2979	29941
12	31.3	0.0	0.0	chr1	17659135	17659181	(231297241)	+	(CTGG)n	Simple_repeat	1	47	(0)	29942
226	20.5	0.0	0.0	chr1	18951065	18951103	(230005319)	+	MIR3	SINE/MIR	109	147	(61)	32763
204	20.3	3.9	6.3	chr1	19405207	19405285	(229551137)	C	L2a	LINE/L2	(5)	3421	3345	33570
1947	15.7	0.0	0.3	chr1	23223057	23223342	(225733080)	C	AluSz	SINE/Alu	(27)	285	1	41919
26	8.9	4.1	0.0	chr1	23223343	23223374	(225733048)	+	(ATT)n	Simple_repeat	2	35	(0)	41920
4846	11.0	3.9	3.2	chr1	23223386	23224529	(225731893)	C	MER11A	LTR/ERVK	(0)	1266	1	41921
2626	2.4	0.7	0.0	chr1	24642171	24642459	(224313963)	C	AluY	SINE/Alu	(20)	291	1	45375
12	26.4	2.2	0.0	chr1	24642576	24642620	(224313802)	+	(GAGGCC)n	Simple_repeat	1	46	(0)	45376
400	25.9	3.6	0.0	chr1	26865543	26865665	(222090757)	+	MIR3	SINE/MIR	29	159	(49)	50326
2399	7.7	0.7	0.0	chr1	27913307	27913606	(221042816)	+	AluSp	SINE/Alu	1	302	(11)	52824
943	11.2	0.0	2.2	chr1	27913635	27913768	(221042654)	+	AluJo	SINE/Alu	1	131	(181)	52825
1948	16.7	1.9	2.2	chr1	28437219	28437529	(220518893)	C	AluJb	SINE/Alu	(2)	310	1	54205
1833	18.5	2.2	5.6	chr1	28437530	28437834	(220518588)	C	MLT1A0	LTR/ERVL-MaLR	(59)	306	1	54204
1809	8.9	12.9	0.4	chr1	28601274	28601530	(220354892)	C	AluSz	SINE/Alu	(18)	294	1	54644
232	27.3	4.9	0.0	chr1	28601535	28601611	(220354811)	+	L2c	LINE/L2	3306	3386	(1)	54634
198	27.5	13.0	0.0	chr1	28601612	28601691	(220354731)	C	MIR3	SINE/MIR	(56)	152	61	54645
337	34.4	2.8	9.8	chr1	28834838	28835111	(220121311)	+	L2c	LINE/L2	3121	3374	(13)	55266
15	11.2	0.0	3.2	chr1	28977550	28977580	(219978842)	+	(TTGT)n	Simple_repeat	1	31	(0)	55650
12	24.1	0.0	0.0	chr1	28977856	28977889	(219978533)	+	(TTTT)n	Simple_repeat	1	34	(0)	55651
50	0.0	2.0	0.0	chr1	29159105	29159153	(219797269)	+	(CAAAC)n	Simple_repeat	1	50	(0)	56053
366	24.8	6.5	1.9	chr1	29202606	29202708	(219753714)	+	MIRc	SINE/MIR	70	177	(91)	56146
1457	30.8	9.1	7.4	chr1	30627052	30627319	(218329103)	C	L1MEd	LINE/L1	(6564)	714	418	58728
3757	14.9	3.5	0.2	chr1	30627320	30627902	(218328520)	C	LTR26	LTR/ERV1	(0)	603	1	58733
404	27.1	7.6	1.6	chr1	30642318	30642441	(218313981)	+	MIRb	SINE/MIR	115	246	(22)	58760
240	22.4	0.0	6.2	chr1	30719892	30719971	(218236451)	+	MIR3	SINE/MIR	96	167	(41)	58909
214	26.2	6.2	0.0	chr1	31184335	31184395	(217772027)	+	MIRc	SINE/MIR	86	150	(118)	60058
733	30.9	0.9	1.4	chr1	31184474	31184696	(217771726)	C	MIRb	SINE/MIR	(21)	247	26	60059
2130	11.0	1.7	0.7	chr1	31713889	31714178	(217242244)	+	AluSx1	SINE/Alu	1	293	(19)	61197
199	30.9	6.7	0.0	chr1	31714336	31714419	(217242003)	+	MIR3	SINE/MIR	85	174	(34)	61198
1623	13.5	6.0	5.1	chr1	31945033	31945127	(217011295)	C	MER2	DNA/TcMar-Tigger	(5)	340	256	61670
198	22.7	2.2	0.0	chr1	32241819	32241862	(216714560)	+	MIRc	SINE/MIR	120	164	(104)	62376
265	29.6	3.0	3.9	chr1	32265278	32265379	(216691043)	C	Charlie19a	DNA/hAT-Charlie	(285)	101	1	62458
536	17.2	15.4	0.0	chr1	32295793	32295891	(216660531)	C	AluJo	SINE/Alu	(194)	118	2	62551
572	27.8	5.1	7.0	chr1	32296002	32296202	(216660220)	+	L2c	LINE/L2	3191	3387	(0)	62552
2140	25.5	7.9	17.1	chr1	32395125	32395608	(216560814)	+	L2a	LINE/L2	1636	2052	(1367)	62773
465	36.8	6.7	0.5	chr1	32492707	32492930	(216463492)	C	L2c	LINE/L2	(6)	3381	3143	62966
774	18.5	3.9	1.7	chr1	32502929	32503104	(216453318)	+	MER58B	DNA/hAT-Charlie	20	199	(142)	62998
815	21.6	11.4	2.0	chr1	32503149	32503441	(216452981)	+	MLT1G	LTR/ERVL-MaLR	268	591	(0)	62999
677	23.7	8.8	4.1	chr1	32541173	32541485	(216414937)	+	L2a	LINE/L2	2825	3163	(263)	63103
2151	14.2	8.1	0.5	chr1	32541531	32541906	(216414516)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	2	63104
401	18.5	0.0	0.0	chr1	32541925	32541989	(216414433)	+	MER47C	DNA/TcMar-Tigger	1	65	(32)	63105
9211	20.1	5.6	6.1	chr1	32923851	32926332	(216030090)	C	HERVS71-int	LTR/ERV1	(6507)	2471	4	64043
292	32.9	8.4	4.6	chr1	33086763	33087001	(215869421)	+	L2b	LINE/L2	1790	2038	(1381)	64416
38	0.0	4.8	0.0	chr1	33200015	33200056	(215756366)	+	(AAAAC)n	Simple_repeat	1	44	(0)	64664
7278	19.5	9.7	8.1	chr1	33200057	33200220	(215756202)	+	L1MEc	LINE/L1	1981	2172	(4147)	64656
810	14.2	0.0	5.2	chr1	33200221	33200354	(215756068)	+	AluJr4	SINE/Alu	178	304	(8)	64665
7278	19.5	9.7	8.1	chr1	33200355	33200762	(215755660)	+	L1MEc	LINE/L1	2173	2653	(3666)	64656
619	29.0	14.1	2.4	chr1	33268371	33269010	(215687412)	C	L2c	LINE/L2	(14)	3373	2663	64819
1257	24.0	12.0	3.9	chr1	33458209	33458391	(215498031)	+	L2a	LINE/L2	3216	3408	(18)	65143
26	15.5	1.6	3.2	chr1	33458770	33458830	(215497592)	+	(ACAC)n	Simple_repeat	1	62	(0)	65145
2053	28.4	5.5	5.9	chr1	33458866	33459129	(215497293)	C	L2	LINE/L2	(339)	3080	2815	65146
1442	16.2	14.4	3.4	chr1	34788524	34788848	(214167574)	+	MLT1A	LTR/ERVL-MaLR	4	370	(4)	67417
331	25.6	6.5	6.5	chr1	36397465	36397602	(212558820)	+	MIRc	SINE/MIR	11	148	(120)	70781
504	25.0	8.3	2.9	chr1	38018713	38018907	(210937515)	+	MIRb	SINE/MIR	3	228	(34)	73927
884	29.7	2.4	0.4	chr1	38658557	38658803	(210297619)	C	MLT1J2-int	LTR/ERVL-MaLR	(369)	1018	767	75101
1437	23.6	1.6	0.0	chr1	38658795	38659108	(210297314)	C	MLT1J2-int	LTR/ERVL-MaLR	(1068)	319	1	75101
796	30.3	4.2	7.0	chr1	38659109	38659548	(210296874)	C	MLT1J2	LTR/ERVL-MaLR	(0)	448	22	75101
249	21.9	9.9	4.0	chr1	38873899	38873974	(210082448)	C	MIRb	SINE/MIR	(34)	234	154	75487
15	17.0	9.8	1.5	chr1	39576889	39576949	(209379473)	+	(CGGCG)n	Simple_repeat	1	67	(0)	76953
440	27.4	6.3	6.7	chr1	39577002	39577120	(209379302)	C	MER20B	DNA/hAT-Charlie	(23)	760	649	76954
2409	6.0	0.3	1.7	chr1	39577121	39577418	(209379004)	+	AluSc8	SINE/Alu	1	294	(17)	76955
13	32.7	0.0	0.0	chr1	40161427	40161479	(208794943)	+	G-rich	Low_complexity	1	53	(0)	78243
913	25.4	4.4	7.5	chr1	40326256	40326561	(208629861)	+	MLT1H1	LTR/ERVL-MaLR	214	509	(46)	78594
4410	21.0	3.6	4.1	chr1	40326562	40326991	(208629431)	C	L1MD2	LINE/L1	(32)	6500	6067	78595
364	25.0	7.5	2.9	chr1	41224590	41224729	(207731693)	C	MIR	SINE/MIR	(48)	214	68	80372
465	35.4	2.5	1.5	chr1	41224780	41224980	(207731442)	C	MIRc	SINE/MIR	(47)	221	19	80373
24882	6.2	1.3	0.1	chr1	42059276	42065372	(206891050)	+	L1PA4	LINE/L1	4	6154	(1)	81874
197	25.8	4.6	0.0	chr1	42767696	42767757	(206188665)	C	MIRc	SINE/MIR	(76)	192	128	83111
342	14.0	1.1	1.1	chr1	43682566	43682630	(205273792)	+	L2b	LINE/L2	3320	3384	(3)	84715
11	21.1	8.2	0.0	chr1	45015028	45015076	(203941346)	+	(TGTGTC)n	Simple_repeat	1	53	(0)	87197
978	29.3	11.0	6.5	chr1	45370386	45370882	(203585540)	C	L2c	LINE/L2	(0)	3387	2841	87824
457	10.5	7.3	3.4	chr1	45370894	45371029	(203585393)	+	L1MB2	LINE/L1	4739	4879	(1267)	87825
2541	5.2	0.0	1.3	chr1	45736761	45737066	(203219356)	+	AluY	SINE/Alu	4	305	(6)	88647
367	13.6	0.0	0.0	chr1	45737303	45737361	(203219061)	+	Tigger17c	DNA/TcMar-Tigger	24	82	(1106)	88648
445	16.3	8.9	0.0	chr1	45737363	45737454	(203218968)	+	MER44D	DNA/TcMar-Tigger	2	102	(603)	88649
207	24.4	12.8	3.0	chr1	47507273	47507408	(201449014)	+	L2b	LINE/L2	2933	3090	(285)	91742
245	28.8	11.1	9.8	chr1	51238098	51238444	(197717978)	+	L2c	LINE/L2	3006	3369	(18)	98250
14263	17.3	5.3	3.4	chr1	51384638	51386068	(197570354)	+	L1MB3	LINE/L1	4922	6419	(0)	98558
582	15.4	0.0	0.0	chr1	51647833	51647910	(197308512)	+	AluJo	SINE/Alu	1	78	(234)	99176
1286	24.7	6.1	4.8	chr1	51671962	51672335	(197284087)	C	L2a	LINE/L2	(405)	3014	2636	99231
1462	18.8	6.0	2.7	chr1	51672336	51672706	(197283716)	C	L1ME1	LINE/L1	(8)	6171	5788	99232
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
12484	15.4	2.7	3.6	chr1	53221826	53224521	(195731901)	+	L1M1	LINE/L1	172	3222	(4343)	102675
775	28.2	15.7	2.8	chr1	53614071	53614653	(195341769)	C	L2a	LINE/L2	(0)	3426	2742	103420
274	28.7	0.9	9.5	chr1	53614697	53614822	(195341600)	+	L1MD2	LINE/L1	6028	6163	(196)	103421
1557	13.0	6.0	10.5	chr1	53851242	53851556	(195104866)	C	AluJb	SINE/Alu	(12)	300	1	103894
317	28.0	3.2	2.5	chr1	54200601	54200755	(194755667)	+	MIRb	SINE/MIR	30	193	(75)	104653
352	29.6	6.6	0.0	chr1	54200810	54200951	(194755471)	+	MIR3	SINE/MIR	42	193	(15)	104654
295	38.5	10.3	2.4	chr1	54565464	54565676	(194390746)	+	MIR	SINE/MIR	27	258	(4)	105385
485	31.5	13.6	8.0	chr1	54565742	54566174	(194390248)	+	L2	LINE/L2	1722	2238	(1181)	105386
577	25.3	3.5	0.6	chr1	54765001	54765167	(194191255)	C	L2a	LINE/L2	(5)	3421	3250	105842
409	11.9	4.7	3.8	chr1	54765178	54765282	(194191140)	C	MER96B	DNA/hAT-Tip100	(64)	353	248	105843
2354	10.1	0.0	0.7	chr1	54773624	54773931	(194182491)	C	AluSx	SINE/Alu	(6)	306	1	105873
1905	17.1	1.2	9.0	chr1	54773932	54774145	(194182277)	C	MLT1A1	LTR/ERVL-MaLR	(60)	348	156	105872
2128	12.2	2.3	0.0	chr1	54774146	54774447	(194181975)	C	AluSx	SINE/Alu	(3)	309	1	105874
183	35.1	9.8	3.5	chr1	54945367	54945481	(194010941)	+	MIR1_Amn	SINE/MIR	35	157	(73)	106200
14	20.9	5.8	1.8	chr1	54945484	54945535	(194010887)	+	(ATTC)n	Simple_repeat	1	55	(0)	106201
16	10.5	3.2	0.0	chr1	55021721	55021751	(193934671)	+	(GAGGA)n	Simple_repeat	1	32	(0)	106383
13	11.8	7.7	2.4	chr1	55022190	55022228	(193934194)	+	G-rich	Low_complexity	1	42	(0)	106384
294	26.8	18.4	2.2	chr1	55022321	55022587	(193933835)	+	L2a	LINE/L2	306	625	(2794)	106385
370	35.5	5.0	1.9	chr1	55469500	55469714	(193486708)	+	MIRb	SINE/MIR	5	226	(42)	107155
1100	30.6	4.3	3.2	chr1	55673135	55673641	(193282781)	+	LTR33	LTR/ERVL	1	513	(2)	107538
1127	22.9	10.5	3.1	chr1	55747604	55747928	(193208494)	+	MLT1F1	LTR/ERVL-MaLR	217	568	(1)	107670
282	27.0	6.5	3.1	chr1	55828118	55828265	(193128157)	+	MIRb	SINE/MIR	17	171	(37)	107747
685	28.3	18.8	1.9	chr1	55828300	55828663	(193127759)	C	LTR16A1	LTR/ERVL	(0)	456	26	107748
628	28.0	5.2	4.5	chr1	56239552	56239798	(192716624)	C	MLT1H	LTR/ERVL-MaLR	(258)	291	43	108450
2366	21.5	6.0	5.1	chr1	56239894	56240690	(192715732)	+	L1MC5	LINE/L1	8506	9289	(15)	108451
191	33.3	4.3	3.5	chr1	57252598	57252712	(191703710)	C	L2c	LINE/L2	(102)	3285	3170	110439
2013	20.6	5.5	6.9	chr1	57707100	57707631	(191248791)	C	L1MD2	LINE/L1	(287)	6072	5545	111361
3477	26.1	4.4	1.6	chr1	57707692	57709016	(191247406)	C	L1M1	LINE/L1	(5513)	2052	10	111363
2549	16.4	2.5	2.5	chr1	58193031	58193462	(190762960)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	112360
188	20.0	3.9	0.0	chr1	58288633	58288682	(190667740)	+	MIR	SINE/MIR	211	262	(0)	112544
324	30.2	1.2	14.7	chr1	58288761	58288950	(190667472)	C	Tigger20a	DNA/TcMar-Tigger	(471)	502	339	112545
17	0.0	0.0	0.0	chr1	59279600	59279618	(189676804)	+	(T)n	Simple_repeat	1	19	(0)	114582
195	24.5	3.9	0.0	chr1	59280094	59280142	(189676280)	C	L2a	LINE/L2	(12)	3414	3364	114583
697	30.2	3.7	6.8	chr1	59280172	59280423	(189675999)	C	MIRb	SINE/MIR	(23)	245	2	114584
509	28.0	1.6	0.8	chr1	59730409	59730534	(189225888)	+	L2a	LINE/L2	3290	3416	(10)	115354
208	34.3	10.9	8.6	chr1	59730555	59730857	(189225565)	C	L2b	LINE/L2	(18)	3357	3047	115355
327	32.8	12.5	2.6	chr1	59730876	59731069	(189225353)	C	MIRb	SINE/MIR	(36)	232	17	115356
187	10.7	25.3	1.8	chr1	59731066	59731122	(189225300)	C	L2c	LINE/L2	(56)	3331	3257	115357
11176	17.8	2.5	4.7	chr1	60706385	60708762	(188247660)	+	L1MA3	LINE/L1	14	3049	(4516)	116993
334	35.9	5.5	3.9	chr1	60874779	60875062	(188081360)	+	L2c	LINE/L2	3058	3346	(41)	117260
724	22.8	19.0	2.5	chr1	61178774	61179097	(187777325)	C	LTR16C	LTR/ERVL	(7)	482	93	117783
2336	17.2	4.0	0.7	chr1	61485205	61485615	(187470807)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	118224
2425	8.9	0.3	0.0	chr1	61809383	61809685	(187146737)	C	AluSp	SINE/Alu	(8)	305	2	118897
2449	8.2	0.3	0.3	chr1	62040106	62040396	(186916026)	C	AluSx	SINE/Alu	(8)	304	14	119348
2648	13.3	8.5	9.1	chr1	62040397	62040505	(186915917)	C	LTR36	LTR/ERV1	(490)	121	1	119347
843	30.1	10.9	2.6	chr1	62040513	62040829	(186915593)	C	L2a	LINE/L2	(286)	3140	2786	119346
3741	13.0	1.4	0.2	chr1	62040830	62041385	(186915037)	C	MER34B	LTR/ERV1	(2)	563	1	119349
1959	18.4	7.4	1.1	chr1	62100236	62100603	(186855819)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	119487
190	23.3	0.0	0.0	chr1	62297902	62297944	(186658478)	+	MER131	DNA?	34	76	(139)	119932
683	14.3	0.0	0.9	chr1	62298151	62298256	(186658166)	C	U6	snRNA	(2)	105	1	119933
334	18.5	0.0	5.8	chr1	62298257	62298325	(186658097)	+	MER5A	DNA/hAT-Charlie	125	189	(0)	119934
764	18.7	6.6	0.0	chr1	62298365	62298519	(186657903)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	119935
2021	15.6	0.0	1.3	chr1	62339926	62340232	(186616190)	+	AluJr4	SINE/Alu	1	303	(9)	120031
1565	14.8	13.7	10.4	chr1	62340233	62340503	(186615919)	C	MLT1A0	LTR/ERVL-MaLR	(35)	373	91	120030
2255	11.6	0.3	0.0	chr1	62340504	62340804	(186615618)	C	AluSx1	SINE/Alu	(10)	302	1	120032
2364	9.4	0.6	0.8	chr1	62799625	62799977	(186156445)	C	L1MA2	LINE/L1	(0)	6304	5953	120842
2311	9.7	0.7	0.0	chr1	63441247	63441535	(185514887)	C	AluSg	SINE/Alu	(19)	291	1	122075
910	17.3	6.6	0.0	chr1	63441954	63442109	(185514313)	+	AluJo	SINE/Alu	137	303	(9)	122076
544	26.8	15.7	0.5	chr1	64046767	64046987	(184909435)	+	MIRb	SINE/MIR	8	268	(0)	123198
459	28.1	6.6	3.4	chr1	64047087	64047263	(184909159)	+	MIRc	SINE/MIR	85	267	(1)	123199
2538	7.0	0.7	1.0	chr1	64935301	64935600	(184020822)	C	AluSp	SINE/Alu	(14)	299	1	124752
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
395	36.5	3.1	2.2	chr1	65040731	65040954	(183915468)	C	L2b	LINE/L2	(4)	3371	3146	124969
1564	27.3	7.6	5.2	chr1	65074857	65075510	(183880912)	C	L2	LINE/L2	(1675)	1744	1074	125037
336	27.7	5.1	3.7	chr1	65075673	65075807	(183880615)	+	L2a	LINE/L2	3289	3425	(1)	125030
19	4.5	0.0	0.0	chr1	65419562	65419584	(183536838)	+	(T)n	Simple_repeat	1	23	(0)	125758
539	31.1	13.9	2.5	chr1	65483569	65483928	(183472494)	+	L2a	LINE/L2	2877	3269	(157)	125863
739	21.9	36.1	0.0	chr1	65483930	65484156	(183472266)	C	AluJb	SINE/Alu	(3)	309	1	125864
211	26.9	5.5	0.0	chr1	65484202	65484253	(183472169)	+	L2a	LINE/L2	3350	3404	(22)	125863
1982	18.3	2.5	4.3	chr1	65536045	65536484	(183419938)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	125954
1802	26.9	7.6	1.3	chr1	65536485	65537139	(183419283)	C	Kanga1a	DNA/TcMar-Tc2	(42)	712	3	125953
11	13.2	5.7	2.7	chr1	65687832	65687866	(183268556)	+	(CCTTCTG)n	Simple_repeat	1	37	(0)	126133
14	8.1	0.0	3.6	chr1	66253731	66253758	(182702664)	+	(TTTTG)n	Simple_repeat	1	28	(0)	126929
608	30.0	12.7	4.4	chr1	66774503	66774913	(182181509)	+	LTR33	LTR/ERVL	66	515	(0)	127746
371	23.9	6.0	0.0	chr1	67853976	67854084	(181102338)	+	MLT1N2	LTR/ERVL-MaLR	433	548	(14)	129703
15	12.2	0.0	0.0	chr1	68117070	68117096	(180839326)	+	(CCTC)n	Simple_repeat	1	27	(0)	130107
567	29.1	3.2	0.8	chr1	68321019	68321214	(180635208)	C	MIR	SINE/MIR	(10)	252	49	130471
200	29.7	17.9	0.0	chr1	68343064	68343127	(180613295)	C	MIR3	SINE/MIR	(86)	122	45	130514
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
554	27.8	5.1	0.5	chr1	70497311	70497498	(178458924)	C	MER63A	DNA/hAT-Blackjack	(0)	210	14	133531
11097	19.1	1.7	1.3	chr1	73091244	73094326	(175862096)	C	L1MA3	LINE/L1	(4127)	3438	20	136974
2188	28.8	4.0	4.8	chr1	73116570	73117454	(175838968)	+	ERVL-E-int	LTR/ERVL	52	966	(4791)	137002
976	23.3	0.5	0.0	chr1	73117479	73117671	(175838751)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	172	137003
232	34.3	12.6	1.6	chr1	74245297	74245542	(174710880)	+	AmnSINE1	SINE/5S-Deu-L2	100	376	(199)	138390
1767	19.5	5.4	0.3	chr1	74677663	74678047	(174278375)	+	MLT1A1	LTR/ERVL-MaLR	3	408	(0)	138995
14596	13.1	4.5	1.0	chr1	75461644	75463139	(173493283)	+	L1MA2	LINE/L1	1175	2722	(4843)	139960
13732	15.5	3.4	2.8	chr1	75671973	75674384	(173282038)	+	L1M1	LINE/L1	16	2452	(5113)	140280
1894	16.6	11.1	0.7	chr1	76254730	76255173	(172701249)	C	LTR54B	LTR/ERV1	(0)	498	3	141164
201	28.8	6.3	0.0	chr1	76442102	76442160	(172514262)	+	MIR3	SINE/MIR	83	145	(63)	141459
642	25.1	6.7	3.5	chr1	76442276	76442477	(172513945)	+	Tigger19a	DNA/TcMar-Tigger	115	323	(0)	141460
1465	26.2	11.3	3.0	chr1	76643392	76643898	(172312524)	C	MLT1F2	LTR/ERVL-MaLR	(2)	558	4	141725
1784	17.0	1.5	1.5	chr1	78114653	78114981	(170841441)	+	L1MC1	LINE/L1	5999	6327	(6)	144118
474	27.1	9.2	0.8	chr1	78152927	78153175	(170803247)	C	L1ME4a	LINE/L1	(79)	6045	5774	144189
5043	15.3	5.1	0.3	chr1	78153172	78154070	(170802352)	C	L1M1	LINE/L1	(5529)	2036	1093	144190
231	25.4	4.3	2.9	chr1	79213916	79213984	(169742438)	C	L2c	LINE/L2	(5)	3421	3352	145587
16	20.7	0.0	0.0	chr1	79214139	79214177	(169742245)	+	(ATTTAT)n	Simple_repeat	1	39	(0)	145588
5127	13.9	3.9	2.1	chr1	80264090	80265776	(168690646)	+	L1PA16	LINE/L1	5164	6863	(6)	146950
229	16.7	2.0	0.0	chr1	81762648	81762695	(167193727)	+	L1M1	LINE/L1	5867	5915	(387)	148965
2517	7.9	1.3	0.0	chr1	81762771	81763075	(167193347)	+	AluYj4	SINE/Alu	1	309	(2)	148966
1172	31.1	0.6	2.3	chr1	82519474	82519819	(166436603)	C	LTR16A	LTR/ERVL	(5)	446	107	149925
1973	17.6	0.0	0.3	chr1	83737445	83737757	(165218665)	+	AluJb	SINE/Alu	1	312	(0)	151577
1696	18.0	1.0	8.0	chr1	83737758	83737824	(165218598)	+	MLT1B	LTR/ERVL-MaLR	317	383	(7)	151575
25	28.2	3.6	0.0	chr1	83737827	83737921	(165218501)	+	(AT)n	Simple_repeat	1	98	(0)	151578
454	29.3	0.8	2.5	chr1	83738081	83738199	(165218223)	+	MIRc	SINE/MIR	22	138	(130)	151579
182	27.9	5.6	5.6	chr1	83738208	83738279	(165218143)	C	MIR	SINE/MIR	(5)	257	186	151580
329	33.1	7.5	0.7	chr1	83738251	83738399	(165218023)	+	MIRc	SINE/MIR	109	268	(0)	151579
1658	18.0	8.8	4.1	chr1	83844795	83845182	(165111240)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	151722
2711	18.2	5.3	3.3	chr1	84206362	84206912	(164749510)	C	MER68	LTR/ERVL	(0)	563	1	152193
184	29.2	3.6	13.8	chr1	84371473	84371538	(164584884)	C	MIRc	SINE/MIR	(17)	251	201	152417
633	21.4	0.9	0.0	chr1	84371539	84371650	(164584772)	C	MER81	DNA/hAT-Blackjack	(0)	114	2	152418
184	29.2	3.6	13.8	chr1	84371651	84371706	(164584716)	C	MIRc	SINE/MIR	(68)	200	142	152417
797	20.0	2.7	1.6	chr1	84371713	84371895	(164584527)	+	MER5A	DNA/hAT-Charlie	3	187	(2)	152419
318	24.3	2.6	1.3	chr1	84371918	84371992	(164584430)	+	L3	LINE/CR1	4017	4092	(7)	152420
183	35.6	0.0	3.3	chr1	84688843	84688932	(164267490)	C	MIR1_Amn	SINE/MIR	(75)	155	69	152918
433	23.9	0.0	0.0	chr1	84936010	84936097	(164020325)	+	MIRb	SINE/MIR	27	114	(154)	153346
374	10.9	0.0	0.0	chr1	84998817	84998862	(163957560)	+	FAM	SINE/Alu	107	152	(33)	153438
1771	19.0	6.0	5.8	chr1	85149783	85150213	(163806209)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	153702
1677	18.5	7.1	5.2	chr1	85261040	85261478	(163694944)	C	MER77B	LTR/ERVL	(44)	656	209	153888
990	30.0	12.3	0.5	chr1	85261684	85262092	(163694330)	+	L2a	LINE/L2	1986	2449	(970)	153889
1066	22.5	1.8	0.7	chr1	85262136	85262404	(163694018)	C	L1MC4	LINE/L1	(529)	7513	7242	153890
366	29.4	6.0	0.0	chr1	85275000	85275125	(163681297)	+	MIR	SINE/MIR	105	238	(24)	153914
309	24.2	13.9	5.8	chr1	85275153	85275323	(163681099)	+	L2a	LINE/L2	3234	3420	(6)	153915
1708	17.4	7.2	1.5	chr1	85286131	85286457	(163669965)	C	MLT1A1	LTR/ERVL-MaLR	(61)	347	1	153939
20	0.0	0.0	0.0	chr1	85464590	85464611	(163491811)	+	(AC)n	Simple_repeat	1	22	(0)	154198
232	27.3	13.9	0.0	chr1	85654603	85654701	(163301721)	+	L2c	LINE/L2	3270	3384	(3)	154513
244	31.2	12.2	1.4	chr1	85654707	85654852	(163301570)	+	MIRc	SINE/MIR	99	262	(6)	154514
12195	4.5	0.5	0.0	chr1	86180305	86182654	(162773768)	C	L1PA4	LINE/L1	(0)	6155	3795	155250
11050	15.1	5.0	4.3	chr1	86535133	86537604	(162418818)	C	L1MC1	LINE/L1	(3818)	2503	2	155744
2050	10.6	5.5	0.0	chr1	86909724	86909997	(162046425)	+	AluSx3	SINE/Alu	1	290	(21)	156329
430	25.5	9.8	8.2	chr1	86993598	86993879	(161962543)	C	MER34B	LTR/ERV1	(0)	587	301	156458
15530	17.4	3.6	0.6	chr1	88424816	88427539	(160528883)	+	L1MA4A	LINE/L1	19	2827	(4738)	158454
20	17.4	0.0	0.0	chr1	88685229	88685267	(160271155)	+	(T)n	Simple_repeat	1	39	(0)	158817
47	0.0	0.0	0.0	chr1	88848612	88848651	(160107771)	+	(GT)n	Simple_repeat	1	40	(0)	159093
9832	14.2	1.9	1.3	chr1	89318963	89322381	(159634041)	C	L1M1	LINE/L1	(2351)	5214	1773	159730
544	11.6	4.4	0.0	chr1	89322372	89322457	(159633965)	C	L1M1	LINE/L1	(7004)	561	472	159730
2308	19.1	2.0	1.1	chr1	89322532	89322986	(159633436)	C	L1M1	LINE/L1	(7095)	470	12	159730
1652	19.8	9.6	1.0	chr1	89546890	89547287	(159409135)	+	MER63B	DNA/hAT-Blackjack	1	436	(0)	160005
23	15.2	6.7	5.3	chr1	90718043	90718086	(158238336)	+	(CCGCGC)n	Simple_repeat	11	95	(0)	161677
13	24.6	2.3	0.0	chr1	90718250	90718292	(158238130)	+	G-rich	Low_complexity	1	44	(0)	161679
1742	20.1	1.8	7.7	chr1	91934875	91935137	(157021285)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	140	163536
1887	17.2	0.0	0.7	chr1	91935138	91935439	(157020983)	+	AluJo	SINE/Alu	5	304	(8)	163537
1742	20.1	1.8	7.7	chr1	91935440	91935503	(157020919)	C	MLT1B	LTR/ERVL-MaLR	(251)	139	78	163536
16	0.0	0.0	0.0	chr1	92204531	92204547	(156751875)	+	(A)n	Simple_repeat	1	17	(0)	164069
317	37.9	1.1	1.1	chr1	92711150	92711328	(156245094)	C	L2	LINE/L2	(939)	2480	2302	164918
1456	19.8	8.8	0.3	chr1	92711804	92712137	(156244285)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	164920
1388	14.8	6.3	0.3	chr1	92846190	92846473	(156109949)	C	L1MA5	LINE/L1	(34)	6266	5965	165214
1958	14.9	0.7	0.3	chr1	92859714	92860001	(156096421)	C	AluJr	SINE/Alu	(23)	289	1	165249
939	21.4	10.2	10.4	chr1	92860002	92860192	(156096230)	+	LTR82A	LTR/ERVL	275	453	(419)	165248
465	21.5	3.2	0.8	chr1	92860208	92860329	(156096093)	C	MER5A	DNA/hAT-Charlie	(1)	188	64	165250
862	24.1	6.0	10.6	chr1	92860376	92860507	(156095915)	+	LTR82A	LTR/ERVL	482	613	(259)	165248
1986	14.6	2.0	0.0	chr1	92860508	92860801	(156095621)	+	AluSx	SINE/Alu	1	300	(12)	165251
13	4.1	3.7	3.6	chr1	93179890	93179916	(155776506)	+	(GCCTC)n	Simple_repeat	1	28	(0)	165854
4324	14.2	2.7	1.3	chr1	94929428	94930120	(154026302)	C	MER50	LTR/ERV1	(20)	714	12	168521
3981	18.3	3.4	2.5	chr1	94930167	94931052	(154025370)	C	L1ME1	LINE/L1	(2)	6177	5284	168522
502	30.7	4.9	2.7	chr1	94970758	94970978	(153985444)	+	LTR103b_Mam	LTR/ERV1?	288	513	(35)	168616
373	4.0	2.0	0.0	chr1	94971050	94971099	(153985323)	C	MADE1	DNA/TcMar-Mariner	(29)	51	1	168617
294	25.7	0.0	0.0	chr1	94971100	94971169	(153985253)	+	MIR	SINE/MIR	153	222	(40)	168618
19	8.6	0.0	7.0	chr1	95066997	95067039	(153889383)	+	(TTTTAT)n	Simple_repeat	1	43	(0)	168784
2340	18.0	4.0	1.4	chr1	95067062	95067494	(153888928)	+	MER65A	LTR/ERV1	1	445	(0)	168785
4356	15.1	3.8	0.5	chr1	99362686	99363480	(149592942)	C	L1MA6	LINE/L1	(10)	6290	5469	174734
292	29.1	12.7	3.2	chr1	99363700	99363855	(149592567)	+	LTR16E1	LTR/ERVL	29	201	(337)	174735
354	30.4	3.9	1.6	chr1	99671322	99671448	(149284974)	+	MIRb	SINE/MIR	55	184	(84)	175162
1554	20.5	6.3	7.3	chr1	99771425	99771902	(149184520)	C	MER65D	LTR/ERV1	(0)	473	1	175335
2336	10.3	0.3	0.0	chr1	99772048	99772348	(149184074)	+	AluSx1	SINE/Alu	1	302	(10)	175336
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
560	35.0	2.2	9.9	chr1	101110104	101110455	(147845967)	+	L2b	LINE/L2	3052	3375	(0)	177500
15151	19.5	2.3	1.9	chr1	101517077	101521098	(147435324)	C	L1MA4	LINE/L1	(2279)	5283	1240	178139
692	32.1	10.6	1.4	chr1	103348297	103348900	(145607522)	C	L2a	LINE/L2	(9)	3366	2716	180391
9942	13.7	1.4	2.9	chr1	104903306	104904908	(144051514)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	1	182198
20654	16.1	2.4	1.4	chr1	105026421	105029993	(143926429)	+	L1M1	LINE/L1	12	3622	(3943)	182362
801	32.4	11.4	0.0	chr1	107026814	107027208	(141929214)	C	L2a	LINE/L2	(12)	3414	2969	184841
210	30.7	13.2	0.8	chr1	108001414	108001567	(140954855)	+	MIRc	SINE/MIR	1	181	(27)	186208
3720	22.3	8.8	1.5	chr1	108210579	108211700	(140744722)	+	L1MC4	LINE/L1	6447	7657	(385)	186518
192	22.2	0.0	4.3	chr1	108534739	108534785	(140421637)	+	MIRc	SINE/MIR	149	193	(75)	186884
483	32.7	13.5	2.3	chr1	108535114	108535475	(140420947)	+	L2b	LINE/L2	2872	3270	(117)	186880
11	19.6	9.1	1.7	chr1	109041107	109041161	(139915261)	+	(CGCCCT)n	Simple_repeat	1	60	(0)	187837
1665	28.3	4.9	1.4	chr1	109303175	109303665	(139652757)	+	L2a	LINE/L2	988	1496	(1923)	188364
17	3.0	2.4	9.5	chr1	109397405	109397445	(139558977)	+	(CCCG)n	Simple_repeat	1	42	(0)	188515
2877	11.1	5.9	2.9	chr1	109727607	109728373	(139228049)	C	PABL_A-int	LTR/ERV1	(5330)	1268	503	189009
17	8.6	5.1	2.4	chr1	109728410	109728448	(139227974)	+	(TCTTTCC)n	Simple_repeat	1	41	(0)	189010
253	7.5	0.0	0.0	chr1	109728451	109728490	(139227932)	C	PABL_A-int	LTR/ERV1	(5872)	726	687	189009
2136	12.2	0.0	0.0	chr1	109728495	109728790	(139227632)	C	AluSc	SINE/Alu	(13)	296	1	189011
200	26.5	21.7	0.0	chr1	109805534	109805616	(139150806)	+	MIR	SINE/MIR	146	251	(11)	189113
21375	8.4	2.0	0.9	chr1	111681259	111686272	(137270150)	+	L1PA7	LINE/L1	1376	6458	(11)	191923
225	29.4	0.0	0.0	chr1	112544078	112544128	(136412294)	+	L2b	LINE/L2	3316	3366	(9)	193280
2347	8.7	1.0	0.0	chr1	113020960	113021258	(135935164)	+	AluSz6	SINE/Alu	1	302	(10)	194292
568	25.9	9.5	6.6	chr1	113021259	113021468	(135934954)	+	MER34B	LTR/ERV1	355	565	(0)	194291
201	27.3	0.0	0.0	chr1	113021479	113021533	(135934889)	C	L3	LINE/CR1	(1164)	2935	2881	194271
539	36.6	3.5	8.5	chr1	113021566	113022010	(135934412)	+	L2b	LINE/L2	2953	3374	(1)	194293
381	27.3	13.3	6.5	chr1	113191948	113192331	(135764091)	C	LTR33	LTR/ERVL	(0)	515	102	194638
450	27.8	8.3	0.6	chr1	113277273	113277449	(135678973)	C	MIRb	SINE/MIR	(57)	211	20	194791
25	6.4	0.0	0.0	chr1	113308661	113308693	(135647729)	+	(AG)n	Simple_repeat	1	33	(0)	194836
275	29.9	3.3	0.8	chr1	113308822	113308939	(135647483)	+	L4_C_Mam	LINE/RTE-X	4769	4889	(249)	194837
34	0.0	2.9	0.0	chr1	113308950	113308984	(135647438)	+	(TTTTATA)n	Simple_repeat	1	36	(0)	194838
15326	6.8	0.3	0.3	chr1	113411876	113414694	(135541728)	C	L1PA6	LINE/L1	(1)	6153	3331	195003
17753	12.6	2.8	2.5	chr1	113713779	113715373	(135241049)	+	L1M1	LINE/L1	569	2203	(5362)	195390
1980	15.4	2.9	1.0	chr1	113715374	113715678	(135240744)	+	AluJb	SINE/Alu	2	312	(0)	195391
7726	12.1	3.6	0.9	chr1	114279303	114280548	(134675874)	+	L1MC1	LINE/L1	3039	4319	(2002)	196331
2156	23.1	6.1	3.2	chr1	115717269	115717634	(133238788)	+	LTR26	LTR/ERV1	233	603	(0)	198600
185	20.0	4.8	0.0	chr1	115772359	115772398	(133184024)	+	L2b	LINE/L2	3110	3151	(224)	198689
2177	9.9	0.0	1.7	chr1	116138684	116138985	(132817437)	+	AluSx1	SINE/Alu	1	297	(15)	199214
1190	18.4	7.4	3.0	chr1	116237151	116237430	(132718992)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	217	199369
322	33.7	4.6	2.6	chr1	116237460	116237561	(132718861)	C	L1ME3C	LINE/L1	(1255)	4891	4793	199368
733	16.7	6.0	2.5	chr1	116237562	116237721	(132718701)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	199370
12	4.3	8.3	0.0	chr1	116666285	116666308	(132290114)	+	(CAGCA)n	Simple_repeat	1	26	(0)	200064
257	26.0	3.7	4.6	chr1	116667016	116667124	(132289298)	+	MIR1_Amn	SINE/MIR	28	135	(95)	200065
643	31.7	3.5	1.3	chr1	116902198	116902511	(132053911)	+	LTR16E1	LTR/ERVL	212	532	(6)	200469
199	29.1	0.0	0.0	chr1	116902684	116902738	(132053684)	+	Tigger19a	DNA/TcMar-Tigger	115	169	(154)	200470
232	28.2	6.4	3.7	chr1	116906210	116906345	(132050077)	C	L3b	LINE/CR1	(65)	5167	5028	200474
12	20.2	0.0	6.7	chr1	116906373	116906417	(132050005)	+	(TTCTAA)n	Simple_repeat	1	45	(0)	200477
275	24.5	12.7	0.9	chr1	116986056	116986166	(131970256)	+	MIR	SINE/MIR	96	221	(41)	200581
8841	18.3	2.0	1.4	chr1	117662200	117663840	(131292582)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	201633
187	32.0	6.4	5.5	chr1	119550154	119550262	(129406160)	+	L2c	LINE/L2	3250	3359	(28)	204220
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
32	27.1	7.1	3.3	chr1	145451778	145452001	(103504421)	+	GA-rich	Low_complexity	1	240	(0)	210976
198	31.4	5.3	8.2	chr1	145452205	145452339	(103504083)	C	L2c	LINE/L2	(0)	3387	3257	210977
3579	27.3	6.5	3.2	chr1	147016648	147018062	(101938360)	C	L1M1	LINE/L1	(4984)	2581	18	213550
2168	11.3	1.7	0.0	chr1	147744836	147745128	(101211294)	+	AluSq2	SINE/Alu	2	299	(14)	214561
1508	29.1	7.4	3.7	chr1	147745129	147745366	(101211056)	+	ERVL-E-int	LTR/ERVL	1737	1973	(3694)	214560
1000	26.4	5.6	0.7	chr1	147745469	147745773	(101210649)	+	ERVL-E-int	LTR/ERVL	2038	2358	(3356)	214560
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
654	1.4	0.0	0.0	chr1	148265108	148265179	(100691243)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	215393
409	23.1	6.1	3.6	chr1	149911672	149911783	(99044639)	C	L2b	LINE/L2	(0)	3375	3261	217984
2265	10.5	0.0	1.6	chr1	150817526	150817831	(98138591)	+	AluSq2	SINE/Alu	1	301	(12)	219886
2488	7.4	0.0	0.0	chr1	151062365	151062660	(97893762)	C	AluSg4	SINE/Alu	(14)	296	1	220409
2196	12.4	0.0	0.3	chr1	151300657	151300963	(97655459)	C	7SLRNA	srpRNA	(13)	307	2	220925
2171	11.6	2.3	1.7	chr1	151301210	151301382	(97655040)	C	AluSg4	SINE/Alu	(6)	304	135	220926
477	25.9	0.0	5.7	chr1	151593581	151593703	(97362719)	C	MIR3	SINE/MIR	(4)	204	89	221554
260	34.3	8.7	3.5	chr1	151594036	151594114	(97362308)	+	MIR3	SINE/MIR	52	131	(77)	221555
51	0.0	0.0	0.0	chr1	151594115	151594160	(97362262)	+	(CAAAA)n	Simple_repeat	1	46	(0)	221556
260	34.3	8.7	3.5	chr1	151594161	151594222	(97362200)	+	MIR3	SINE/MIR	132	201	(7)	221555
2611	5.7	0.0	0.0	chr1	151869469	151869767	(97086655)	C	AluYm1	SINE/Alu	(12)	299	1	222018
2894	18.3	3.1	2.5	chr1	151869775	151870409	(97086013)	C	L1MB5	LINE/L1	(1840)	4300	3662	222015
263	32.2	16.1	1.8	chr1	152459741	152459958	(96496464)	C	MIRb	SINE/MIR	(7)	261	7	222819
232	28.2	4.3	11.3	chr1	153490680	153490803	(95465619)	C	MIR	SINE/MIR	(128)	134	20	224165
326	30.6	2.4	6.2	chr1	153490802	153490930	(95465492)	C	MIR3	SINE/MIR	(67)	141	18	224166
2475	7.9	0.7	0.7	chr1	153913638	153913942	(95042480)	+	AluY	SINE/Alu	2	306	(5)	225056
15087	15.1	2.9	4.0	chr1	154106290	154107219	(94849203)	+	L1M1	LINE/L1	1391	2343	(5222)	225456
12	26.6	2.2	0.0	chr1	154767019	154767063	(94189359)	+	GA-rich	Low_complexity	1	46	(0)	226740
15	7.6	0.0	6.2	chr1	155001128	155001159	(93955263)	+	(GAGG)n	Simple_repeat	1	32	(0)	227186
216	21.0	22.1	0.0	chr1	155309378	155309499	(93646923)	+	MIRc	SINE/MIR	43	201	(7)	227718
223	21.8	14.7	5.3	chr1	156054379	156054527	(92901895)	+	MIRc	SINE/MIR	99	268	(0)	229384
1554	7.7	1.0	0.5	chr1	156225283	156225517	(92730905)	C	L1PB1	LINE/L1	(0)	6151	5936	229742
2178	8.1	0.0	1.8	chr1	156445463	156445784	(92510638)	C	AluSz	SINE/Alu	(0)	312	1	230147
233	32.5	0.0	1.2	chr1	156446091	156446174	(92510248)	+	Tigger19b	DNA/TcMar-Tigger	376	458	(92)	230148
326	34.8	11.4	1.4	chr1	156572876	156573482	(92382940)	C	L2c	LINE/L2	(41)	3346	2686	230361
2275	9.4	0.0	0.0	chr1	156573483	156573790	(92382632)	+	AluSx	SINE/Alu	1	308	(4)	230362
1742	15.8	0.0	2.0	chr1	156601937	156602239	(92354183)	C	AluSz6	SINE/Alu	(15)	297	1	230415
16	0.0	0.0	0.0	chr1	156619404	156619424	(92336998)	+	(GACA)n	Simple_repeat	1	21	(0)	230461
18	14.0	0.0	4.7	chr1	156642033	156642075	(92314347)	+	G-rich	Low_complexity	1	43	(0)	230512
12	6.9	5.9	5.6	chr1	156642160	156642193	(92314229)	+	(GCAGCT)n	Simple_repeat	1	36	(0)	230513
704	25.9	9.3	12.1	chr1	156759187	156759476	(92196946)	C	L1ME4b	LINE/L1	(10)	882	572	230698
43	4.5	0.0	0.0	chr1	157137510	157137555	(91818867)	+	(AC)n	Simple_repeat	1	46	(0)	231317
2644	11.0	3.8	6.5	chr1	157273298	157273792	(91682630)	C	LTR21A	LTR/ERV1	(0)	481	1	231519
2655	15.0	3.1	3.9	chr1	157273793	157274117	(91682305)	C	HERVFH21-int	LTR/ERV1	(0)	6529	6204	231519
40	0.0	0.0	0.0	chr1	157274118	157274151	(91682271)	+	(TG)n	Simple_repeat	1	34	(0)	231520
2655	15.0	3.1	3.9	chr1	157274152	157274284	(91682138)	C	HERVFH21-int	LTR/ERV1	(326)	6203	6075	231519
218	32.4	5.3	0.0	chr1	157798471	157798541	(91157881)	+	L2a	LINE/L2	3352	3426	(0)	232197
248	33.3	3.9	0.0	chr1	158124990	158125088	(90831334)	+	Plat_L3	LINE/CR1	3434	3536	(50)	232712
2501	7.2	0.0	0.0	chr1	158125360	158125665	(90830757)	C	AluSc5	SINE/Alu	(0)	309	4	232713
10237	20.7	3.9	0.5	chr1	158505037	158507710	(90448712)	C	L1M1	LINE/L1	(4080)	3485	22	233150
236	30.1	2.4	2.4	chr1	160007952	160008036	(88948386)	+	MIRc	SINE/MIR	47	131	(137)	235088
1067	15.0	0.0	0.0	chr1	160008305	160008457	(88947965)	C	AluJr	SINE/Alu	(15)	297	145	235089
18	25.5	2.3	5.6	chr1	161440260	161440347	(87516075)	+	(CCCG)n	Simple_repeat	1	90	(0)	237537
662	1.3	0.0	0.0	chr1	161440822	161440896	(87515526)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237538
200	20.6	12.5	0.0	chr1	161566582	161566644	(87389778)	C	L2c	LINE/L2	(228)	3159	3088	237735
812	16.0	2.3	2.3	chr1	161611007	161611179	(87345243)	C	L1MD3	LINE/L1	(0)	7995	7823	237805
990	10.4	2.7	0.7	chr1	161611180	161611323	(87345099)	C	AluSx3	SINE/Alu	(13)	298	152	237806
955	13.7	0.0	0.0	chr1	161611324	161611462	(87344960)	+	AluSz6	SINE/Alu	162	300	(12)	237807
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
6835	13.5	3.4	4.8	chr1	163090399	163091647	(85864775)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	1	240230
286	26.4	2.5	0.5	chr1	165443602	165443694	(83512728)	+	L2c	LINE/L2	3272	3390	(36)	243639
2144	12.6	0.0	0.7	chr1	165697747	165698031	(83258391)	+	AluSx1	SINE/Alu	1	283	(29)	244107
33	0.0	2.6	2.5	chr1	165698032	165698070	(83258352)	+	(AAAC)n	Simple_repeat	1	40	(0)	244108
15	4.6	17.8	0.0	chr1	165698592	165698636	(83257786)	+	G-rich	Low_complexity	1	53	(0)	244109
1317	16.6	3.5	6.7	chr1	165815429	165815758	(83140664)	+	L1M4a1	LINE/L1	2209	2646	(10)	244352
1618	27.5	5.2	2.0	chr1	165815775	165816219	(83140203)	+	LTR16B2	LTR/ERVL	3	462	(0)	244357
1696	15.6	12.6	2.3	chr1	165882469	165882822	(83073600)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	1	244472
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
350	25.6	16.7	4.6	chr1	167230276	167230406	(81726016)	+	MIR3	SINE/MIR	2	151	(57)	246384
27	4.5	6.5	0.0	chr1	167464901	167464946	(81491476)	+	(AAAAAAC)n	Simple_repeat	1	49	(0)	246734
42	27.6	2.9	5.1	chr1	169711804	169712012	(79244410)	+	(TTC)n	Simple_repeat	1	215	(0)	250330
483	37.5	11.2	1.7	chr1	170310280	170310691	(78645731)	C	L2c	LINE/L2	(1)	3386	2931	251153
1322	22.8	12.7	0.0	chr1	171015692	171016068	(77940354)	C	MER63B	DNA/hAT-Blackjack	(1)	435	4	252088
182	35.6	14.1	4.4	chr1	171145138	171145609	(77810813)	C	L2b	LINE/L2	(577)	2842	2311	252255
2716	4.0	0.0	0.0	chr1	171145610	171145908	(77810514)	C	AluY	SINE/Alu	(12)	299	1	252257
3184	11.8	0.6	2.8	chr1	171250908	171251403	(77705019)	+	LTR22B	LTR/ERVK	5	489	(3)	252412
424	17.4	0.0	7.5	chr1	171251468	171251573	(77704849)	C	HERVK22-int	LTR/ERVK	(6730)	107	10	252413
629	16.4	11.4	0.0	chr1	171251609	171251748	(77704674)	C	LTR22B2	LTR/ERVK	(1)	599	442	252413
1150	9.5	1.6	0.0	chr1	171251742	171251920	(77704502)	+	LTR22B2	LTR/ERVK	419	600	(0)	252414
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
7275	15.3	10.4	1.9	chr1	173569814	173571140	(75385282)	C	L1MA2	LINE/L1	(6095)	1470	17	255771
248	26.4	10.6	3.5	chr1	173571144	173571257	(75385165)	C	L1ME3G	LINE/L1	(63)	861	739	255777
1350	27.8	7.0	3.6	chr1	173571308	173571785	(75384637)	+	L2a	LINE/L2	2930	3425	(1)	255778
22426	12.9	2.0	0.8	chr1	173627204	173630567	(75325855)	+	L1M1	LINE/L1	17	3398	(4167)	255870
603	33.1	16.0	3.1	chr1	174002596	174003106	(74953316)	+	L2	LINE/L2	1957	2555	(864)	256489
14	23.4	2.1	2.1	chr1	174159974	174160020	(74796402)	+	(TGC)n	Simple_repeat	1	48	(0)	256811
19640	13.1	3.0	1.4	chr1	174209268	174212300	(74744122)	+	L1MA3	LINE/L1	1125	4231	(3334)	256909
13	14.9	5.1	2.4	chr1	174472196	174472212	(74484210)	+	(GAGACA)n	Simple_repeat	6	22	(0)	257258
2631	19.6	5.3	1.1	chr1	174472413	174472949	(74483473)	C	MER68	LTR/ERVL	(2)	561	1	257259
472	31.9	13.4	0.4	chr1	174753028	174753254	(74203168)	+	MIR	SINE/MIR	2	262	(0)	257622
23	8.4	5.3	0.0	chr1	178054930	178054967	(70901455)	+	(TC)n	Simple_repeat	1	40	(0)	262501
4181	7.4	0.0	0.4	chr1	178559967	178560481	(70395941)	C	MER9a2	LTR/ERVK	(0)	513	1	263261
470	24.9	3.0	2.3	chr1	178560741	178560899	(70395523)	C	LTR16D	LTR/ERVL	(0)	651	398	263262
661	12.4	0.0	0.0	chr1	178560913	178561001	(70395421)	+	5S	rRNA	1	89	(32)	263263
225	29.2	4.0	6.2	chr1	178753069	178753196	(70203226)	+	MIRc	SINE/MIR	27	151	(117)	263617
233	27.5	14.0	5.6	chr1	179025153	179025314	(69931108)	C	L2b	LINE/L2	(2)	3424	3220	264026
3941	19.2	7.5	1.4	chr1	179386930	179387174	(69569248)	C	L1MEc	LINE/L1	(5309)	1091	826	264762
1425	21.9	9.1	2.7	chr1	179387175	179387544	(69568878)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	264765
2110	9.8	0.3	6.3	chr1	180549718	180550035	(68406387)	+	AluSc	SINE/Alu	1	299	(10)	266554
889	32.6	4.8	3.3	chr1	180550045	180550495	(68405927)	+	L4_C_Mam	LINE/RTE-X	2749	3206	(1932)	266555
12832	9.2	0.2	1.9	chr1	181247082	181248803	(67707619)	+	HERVK11-int	LTR/ERVK	1	1692	(6261)	267720
2318	7.4	0.3	0.3	chr1	183280776	183281084	(65675338)	C	AluSp	SINE/Alu	(0)	313	1	270848
1475	10.0	0.0	12.2	chr1	183281085	183281170	(65675252)	+	MER30	DNA/hAT-Charlie	158	229	(1)	270846
1200	14.2	3.6	5.0	chr1	183281223	183281444	(65674978)	+	MER20	DNA/hAT-Charlie	1	219	(0)	270849
232	29.7	4.8	3.3	chr1	183291703	183291824	(65664598)	+	MIR3	SINE/MIR	18	141	(67)	270866
5274	16.1	1.5	1.8	chr1	184312205	184313383	(64643039)	C	L1MA6	LINE/L1	(12)	6288	5114	272424
2187	16.1	0.9	0.9	chr1	184348394	184348737	(64607685)	C	MER2	DNA/TcMar-Tigger	(1)	344	1	272488
2674	27.3	5.7	3.8	chr1	184348738	184349719	(64606703)	C	L1MEf	LINE/L1	(4310)	1932	940	272487
366	35.4	1.6	0.0	chr1	184981403	184981529	(63974893)	+	MIRc	SINE/MIR	23	151	(117)	273538
360	29.6	21.9	2.2	chr1	185439274	185439688	(63516734)	C	L2	LINE/L2	(2708)	711	192	274259
220	21.9	16.9	0.0	chr1	185439829	185439892	(63516530)	+	MIR	SINE/MIR	68	144	(118)	274260
2425	11.7	1.1	3.0	chr1	185524924	185525294	(63431128)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	274385
1374	8.6	0.5	1.0	chr1	187072402	187072600	(61883822)	C	AluY	SINE/Alu	(11)	300	103	276519
9579	8.1	8.2	1.4	chr1	187072601	187074381	(61882041)	C	LTR12C	LTR/ERV1	(0)	1579	3	276520
15760	15.2	2.7	3.1	chr1	190628906	190634384	(58322038)	C	L1M1	LINE/L1	(880)	6685	1222	281171
1256	21.0	15.0	0.0	chr1	191833858	191834191	(57122231)	+	MSTD	LTR/ERVL-MaLR	4	396	(0)	282634
8329	19.1	4.9	2.9	chr1	192468537	192470717	(56485705)	C	L1MA3	LINE/L1	(4227)	3338	9	283433
2773	11.7	2.8	2.3	chr1	192925362	192925790	(56030632)	C	Tigger2a	DNA/TcMar-Tigger	(1)	433	3	284083
1007	31.0	5.5	2.7	chr1	194817105	194817704	(54138718)	+	L1MEf	LINE/L1	1082	1699	(4501)	286628
773	31.9	7.0	4.6	chr1	197213192	197213608	(51742814)	+	L1MEg	LINE/L1	12	439	(5645)	289622
5695	16.9	3.9	4.1	chr1	197213602	197214250	(51742172)	+	L1M3	LINE/L1	2706	3344	(2796)	289623
10088	11.6	4.9	0.5	chr1	198009597	198011107	(50945315)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	290650
21	0.0	0.0	0.0	chr1	199679500	199679522	(49276900)	+	(A)n	Simple_repeat	1	23	(0)	292836
360	29.7	7.4	8.6	chr1	199679539	199679723	(49276699)	C	MIRc	SINE/MIR	(57)	211	23	292837
257	30.0	12.1	3.9	chr1	200254354	200254634	(48701788)	+	L4_C_Mam	LINE/RTE-X	4829	5135	(3)	293867
410	26.6	8.7	6.1	chr1	200254680	200254836	(48701586)	+	L2a	LINE/L2	2937	3122	(253)	293868
2458	8.2	0.7	0.3	chr1	200254837	200255128	(48701294)	C	AluY	SINE/Alu	(18)	293	1	293869
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
594	22.4	15.4	0.6	chr1	200803182	200803347	(48153075)	+	MIR	SINE/MIR	28	222	(40)	295024
30	15.9	1.5	2.9	chr1	201023446	201023512	(47932910)	+	(GGC)n	Simple_repeat	1	68	(0)	295379
339	31.9	8.5	9.3	chr1	201383892	201384270	(47572152)	+	L2c	LINE/L2	3032	3375	(0)	295918
253	34.0	0.0	6.4	chr1	201384343	201384452	(47571970)	+	MER5A	DNA/hAT-Charlie	7	109	(80)	295919
194	27.1	11.1	4.0	chr1	201482368	201482467	(47473955)	C	L2b	LINE/L2	(15)	3360	3253	296102
2009	18.1	5.2	1.2	chr1	201675052	201675188	(47281234)	C	MSTB	LTR/ERVL-MaLR	(278)	148	2	296457
13	16.4	5.7	5.4	chr1	201939072	201939124	(47017298)	+	(CCTT)n	Simple_repeat	1	56	(0)	296882
452	26.6	0.9	0.0	chr1	201939244	201939356	(47017066)	C	MIRb	SINE/MIR	(46)	222	109	296883
773	21.1	2.5	1.9	chr1	202852163	202852318	(46104104)	+	FAM	SINE/Alu	1	157	(28)	298621
227	32.1	16.1	4.7	chr1	204989639	204989873	(43966549)	C	L2b	LINE/L2	(5)	3370	3104	302607
920	30.4	4.3	12.3	chr1	205603400	205603716	(43352706)	C	L2a	LINE/L2	(1)	3425	3157	303760
17	10.7	0.0	3.1	chr1	206481442	206481473	(42474949)	+	(GGA)n	Simple_repeat	1	32	(0)	305159
2541	2.1	0.0	0.0	chr1	206481767	206482078	(42474344)	C	AluYa5	SINE/Alu	(0)	311	1	305160
314	25.6	18.2	0.0	chr1	206556282	206556398	(42400024)	+	MIRb	SINE/MIR	118	260	(8)	305296
17	17.3	5.3	4.2	chr1	206556820	206556878	(42399544)	+	G-rich	Low_complexity	1	59	(0)	305297
2148	18.2	6.9	0.0	chr1	209689459	209689860	(39266562)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	310046
2837	28.2	9.0	8.2	chr1	209689861	209690041	(39266381)	+	HAL1	LINE/L1	857	1045	(1462)	310045
552	31.1	11.7	1.7	chr1	210221984	210222222	(38734200)	+	MIRb	SINE/MIR	3	268	(0)	310810
363	34.3	10.7	7.4	chr1	210264850	210265309	(38691113)	C	L2c	LINE/L2	(1)	3386	2910	310870
11884	11.3	4.4	5.1	chr1	211150562	211151086	(37805336)	+	L1M1	LINE/L1	1596	2131	(5434)	312179
2292	11.6	0.3	0.7	chr1	211151087	211151388	(37805034)	+	AluSg4	SINE/Alu	1	301	(9)	312180
1718	22.2	8.1	3.9	chr1	211443505	211443991	(37512431)	+	MLT1E1A	LTR/ERVL-MaLR	79	680	(0)	312715
1079	17.2	0.9	5.7	chr1	211443992	211444201	(37512221)	C	Charlie1	DNA/hAT-Charlie	(314)	2467	2269	312711
5752	17.0	3.9	1.6	chr1	211444207	211445623	(37510799)	+	L1MB4	LINE/L1	4166	5601	(579)	312716
295	33.1	3.8	1.9	chr1	211790182	211790335	(37166087)	+	MER20	DNA/hAT-Charlie	59	215	(4)	313379
1060	21.4	14.6	0.3	chr1	211970566	211970912	(36985510)	+	L1M5	LINE/L1	5254	5658	(584)	313703
294	30.7	3.2	6.7	chr1	211970929	211971092	(36985330)	C	MER20B	DNA/hAT-Charlie	(625)	158	1	313704
741	21.6	13.9	0.5	chr1	211971107	211971292	(36985130)	C	MER20	DNA/hAT-Charlie	(4)	215	1	313705
1184	23.8	5.4	8.3	chr1	211971294	211971634	(36984788)	+	L1ME3E	LINE/L1	5649	5985	(257)	313706
232	26.3	7.3	6.2	chr1	212657721	212657801	(36298621)	+	MIR	SINE/MIR	111	192	(70)	314918
15	13.9	0.0	0.0	chr1	214003634	214003657	(34952765)	+	(A)n	Simple_repeat	1	24	(0)	317055
809	33.5	3.5	0.4	chr1	217711706	217711981	(31244441)	C	LTR16B	LTR/ERVL	(98)	365	81	322123
17847	16.2	5.1	1.4	chr1	219088451	219094763	(29861659)	+	L1MA4	LINE/L1	11	7719	(0)	324154
219	42.4	8.4	2.0	chr1	219352761	219352960	(29603462)	+	L2a	LINE/L2	2672	2885	(534)	324490
1739	30.3	8.0	4.5	chr1	219352965	219354201	(29602221)	+	L1MC3	LINE/L1	36	1329	(5071)	324491
3677	24.8	4.7	2.8	chr1	220177113	220178349	(28778073)	+	L1M1	LINE/L1	1772	3025	(4540)	325827
2240	19.5	1.0	0.5	chr1	220308295	220308686	(28647736)	+	MER88	LTR/ERVL	1	394	(70)	326016
9024	7.2	0.2	0.5	chr1	220308687	220310681	(28645741)	+	L1PA7	LINE/L1	4166	6154	(0)	326017
251	29.2	0.0	5.0	chr1	220732912	220733012	(28223410)	+	MIRc	SINE/MIR	161	256	(12)	326657
1084	24.0	10.0	3.3	chr1	223001258	223001525	(25954897)	C	Kanga2_a	DNA/TcMar-Tc2	(44)	844	550	330031
1638	17.3	11.5	0.3	chr1	223001526	223001849	(25954573)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	330032
1084	24.0	10.0	3.3	chr1	223001850	223002071	(25954351)	C	Kanga2_a	DNA/TcMar-Tc2	(339)	549	317	330031
333	26.7	13.2	3.7	chr1	223013091	223013226	(25943196)	C	L2c	LINE/L2	(2)	3385	3235	330042
380	30.3	16.2	1.2	chr1	223013245	223013792	(25942630)	+	L1ME3G	LINE/L1	235	639	(285)	330043
687	29.2	2.3	4.5	chr1	223858080	223858301	(25098121)	C	MIR	SINE/MIR	(40)	222	6	331336
2258	23.1	7.3	5.5	chr1	224113727	224113840	(24842582)	C	L1MC4	LINE/L1	(835)	7207	7102	331809
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
502	26.2	7.6	18.2	chr1	224450092	224450535	(24505887)	C	L2a	LINE/L2	(10)	3416	3024	332585
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
970	9.6	3.5	0.0	chr1	225440292	225440427	(23515995)	C	AluJo	SINE/Alu	(13)	299	159	333975
608	22.9	3.4	5.0	chr1	225440544	225440722	(23515700)	+	MIRb	SINE/MIR	18	193	(75)	333976
12	19.6	0.0	0.0	chr1	225440753	225440781	(23515641)	+	(ATTC)n	Simple_repeat	1	29	(0)	333977
468	27.9	12.3	4.8	chr1	225612613	225613008	(23343414)	+	L1ME4c	LINE/L1	216	645	(185)	334229
572	30.1	15.0	2.1	chr1	225613089	225613465	(23342957)	+	L2a	LINE/L2	2993	3426	(0)	334230
11	7.4	10.3	0.0	chr1	225928519	225928547	(23027875)	+	(CTGCTT)n	Simple_repeat	1	32	(0)	334828
181	34.7	14.8	2.0	chr1	226313220	226313366	(22643056)	+	MIRb	SINE/MIR	52	220	(48)	335655
418	28.1	7.2	2.9	chr1	226313497	226313668	(22642754)	+	MIRc	SINE/MIR	15	194	(74)	335656
1566	15.0	5.1	1.1	chr1	226408353	226408632	(22547790)	C	AluJr	SINE/Alu	(20)	292	1	335835
1169	17.2	14.7	7.3	chr1	226408807	226409008	(22547414)	+	Charlie4a	DNA/hAT-Charlie	93	288	(220)	335836
564	25.1	11.6	0.0	chr1	226782370	226782552	(22173870)	C	MER20B	DNA/hAT-Charlie	(559)	224	18	336461
289	31.1	11.8	2.1	chr1	226782604	226782846	(22173576)	C	MLT1K	LTR/ERVL-MaLR	(112)	483	214	336463
22	10.8	0.0	0.0	chr1	226782886	226782916	(22173506)	+	(T)n	Simple_repeat	1	31	(0)	336464
595	27.5	9.1	2.4	chr1	226783240	226783526	(22172896)	+	MamRep605	LTR?	522	829	(20)	336465
2038	15.1	0.0	2.5	chr1	226783559	226783875	(22172547)	C	AluJr	SINE/Alu	(3)	309	1	336466
17	15.9	1.6	0.0	chr1	227059183	227059217	(21897205)	+	A-rich	Low_complexity	1	58	(15)	336857
18	7.0	3.3	0.0	chr1	227059218	227059247	(21897175)	+	(AGC)n	Simple_repeat	1	31	(0)	336858
3317	23.7	6.6	7.7	chr1	227175591	227176002	(21780420)	C	HAL1M8	LINE/L1	(475)	2516	2110	337032
266	22.1	7.8	1.0	chr1	227562887	227562982	(21393440)	+	LTR24B	LTR/ERV1	468	570	(6)	337650
668	23.8	10.2	0.4	chr1	227962328	227962593	(20993829)	+	L1MEc	LINE/L1	728	1022	(5378)	338106
1880	15.2	1.4	0.4	chr1	227962597	227962873	(20993549)	+	AluSz	SINE/Alu	3	282	(30)	338108
646	20.4	3.4	6.6	chr1	227962881	227963032	(20993390)	+	L1MB4	LINE/L1	313	459	(6148)	338109
1740	33.2	6.3	8.6	chr1	228130971	228131440	(20824982)	+	ERV24_Prim-int	LTR/ERV1	4131	4624	(2951)	338319
898	12.2	10.3	2.5	chr1	228131452	228131611	(20824811)	C	MSTC	LTR/ERVL-MaLR	(71)	357	184	338334
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
1987	15.5	0.3	2.2	chr1	228657999	228658315	(20298107)	+	AluJb	SINE/Alu	1	311	(1)	338996
1850	19.6	6.4	4.3	chr1	228658316	228658635	(20297787)	+	MLT1A1	LTR/ERVL-MaLR	82	408	(0)	338995
268	31.7	8.2	0.0	chr1	228766848	228766948	(20189474)	C	L2a	LINE/L2	(8)	3418	3309	339163
28	30.1	0.0	2.2	chr1	228767199	228767282	(20189140)	+	A-rich	Low_complexity	1	83	(0)	339164
2347	14.2	2.8	0.3	chr1	228767283	228767662	(20188760)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	339165
414	32.9	9.0	3.9	chr1	229076713	229077323	(19879099)	C	L2c	LINE/L2	(742)	2677	2033	339647
332	15.2	10.8	0.0	chr1	229341682	229341747	(19614675)	C	Charlie4z	DNA/hAT-Charlie	(2)	165	92	340084
28	0.0	12.5	0.0	chr1	229342108	229342155	(19614267)	+	(CCGCGTCCT)n	Simple_repeat	1	54	(0)	340085
13	12.2	2.4	7.1	chr1	229342214	229342254	(19614168)	+	G-rich	Low_complexity	1	42	(0)	340086
3665	15.2	4.3	5.0	chr1	229804791	229805523	(19150899)	C	LTR8A	LTR/ERV1	(0)	727	1	340927
298	12.3	5.0	0.0	chr1	229805837	229805893	(19150529)	C	Arthur1C	DNA/hAT-Tip100	(17)	346	287	340928
3648	16.0	2.5	3.5	chr1	229863063	229863458	(19092964)	C	L1MB3	LINE/L1	(352)	5831	5437	341041
281	19.1	0.0	0.0	chr1	229863593	229863639	(19092783)	C	MIR3	SINE/MIR	(64)	144	98	341043
273	31.0	6.5	0.0	chr1	229863742	229863857	(19092565)	C	MIRb	SINE/MIR	(35)	233	110	341044
363	30.7	8.6	0.0	chr1	230749692	230749818	(18206604)	+	MIR	SINE/MIR	124	262	(0)	342355
2382	6.4	0.0	2.4	chr1	231272690	231272987	(17683435)	+	AluSc	SINE/Alu	2	292	(17)	343214
2560	6.6	0.0	0.0	chr1	231273249	231273550	(17682872)	C	AluY	SINE/Alu	(9)	302	1	343215
18	0.0	0.0	3.7	chr1	231420217	231420243	(17536179)	+	(TGTTT)n	Simple_repeat	1	27	(0)	343469
1159	24.8	20.9	8.3	chr1	231508621	231509504	(17446918)	+	L1MEh	LINE/L1	15	1011	(1224)	343612
1825	18.7	0.0	2.0	chr1	232517760	232518089	(16438333)	+	AluJo	SINE/Alu	2	312	(0)	345029
415	24.7	22.7	1.2	chr1	232518244	232518415	(16438007)	+	MLT1K	LTR/ERVL-MaLR	3	222	(373)	345030
303	34.3	15.7	3.0	chr1	232518490	232518875	(16437547)	+	L2a	LINE/L2	2933	3426	(0)	345031
435	21.5	5.7	1.0	chr1	234066254	234066441	(14889981)	+	L2b	LINE/L2	2814	3021	(398)	347302
18	12.0	0.0	0.0	chr1	234607054	234607080	(14349342)	+	(AT)n	Simple_repeat	1	27	(0)	348162
15	27.6	0.0	0.0	chr1	234611146	234611184	(14345238)	+	GA-rich	Low_complexity	1	39	(0)	348169
187	25.9	3.6	3.6	chr1	234611624	234611679	(14344743)	+	L2	LINE/L2	1268	1323	(2096)	348170
14	18.0	0.0	7.8	chr1	234756668	234756718	(14199704)	+	(CCCCT)n	Simple_repeat	1	51	(0)	348393
628	31.2	0.6	0.6	chr1	234756934	234757110	(14199312)	C	MIRb	SINE/MIR	(46)	222	46	348394
1644	18.6	9.1	10.2	chr1	234766031	234766373	(14190049)	+	MLT1A1	LTR/ERVL-MaLR	1	341	(67)	348406
2068	15.1	0.3	0.6	chr1	234766374	234766685	(14189737)	C	AluSz	SINE/Alu	(1)	311	1	348407
426	19.8	1.0	0.0	chr1	235161595	235161690	(13794732)	+	L1MC4	LINE/L1	7946	8042	(0)	349156
1547	16.8	4.3	1.7	chr1	235161986	235162277	(13794145)	+	AluJr	SINE/Alu	2	301	(11)	349157
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
15	18.2	2.1	4.2	chr1	235649786	235649854	(13306568)	+	(CCCCG)n	Simple_repeat	1	67	(0)	350172
544	34.3	10.6	5.0	chr1	235713805	235714187	(13242235)	+	L3	LINE/CR1	3308	3714	(385)	350282
292	30.5	6.4	5.8	chr1	235714297	235714435	(13241987)	+	L3	LINE/CR1	3709	3848	(251)	350282
191	27.8	6.7	3.8	chr1	235714423	235714553	(13241869)	+	X7B_LINE	LINE/CR1	62	196	(54)	350283
188	17.5	9.5	1.7	chr1	236002134	236002191	(12954231)	C	L2c	LINE/L2	(171)	3216	3154	350795
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2430	7.8	0.3	0.0	chr1	236506881	236507176	(12449246)	+	AluSc	SINE/Alu	1	297	(12)	351785
282	29.2	15.1	2.2	chr1	236868763	236868986	(12087436)	C	Charlie21a	DNA/hAT-Charlie	(873)	340	83	352384
17	0.0	0.0	0.0	chr1	237013535	237013556	(11942866)	+	(TGAA)n	Simple_repeat	1	22	(0)	352640
756	20.9	0.0	0.8	chr1	237165582	237165715	(11790707)	+	AluJr4	SINE/Alu	1	133	(179)	352863
1470	18.5	3.1	1.1	chr1	237165721	237166001	(11790421)	+	AluJo	SINE/Alu	2	288	(24)	352864
11	30.4	4.3	1.4	chr1	240302924	240302993	(8653429)	+	(ATATAA)n	Simple_repeat	1	73	(0)	357440
8805	17.6	2.7	2.9	chr1	240303253	240305038	(8651384)	C	L1M4c	LINE/L1	(4585)	1799	18	357441
258	30.6	6.1	3.1	chr1	240585059	240585186	(8371236)	+	MIRc	SINE/MIR	99	230	(38)	357871
2403	10.4	0.0	0.0	chr1	240585448	240585756	(8370666)	+	AluSx1	SINE/Alu	1	309	(3)	357872
1697	19.9	0.3	1.8	chr1	240712599	240712933	(8243489)	C	AluJr4	SINE/Alu	(0)	312	1	358132
1863	20.5	3.0	8.6	chr1	241485382	241485951	(7470471)	+	LTR55	LTR/ERVL?	1	537	(11)	359353
318	24.5	7.0	4.2	chr1	244086997	244087112	(4869310)	+	L2b	LINE/L2	2065	2185	(1234)	363571
1742	22.7	2.2	1.6	chr1	244087113	244087564	(4868858)	+	MLT1C	LTR/ERVL-MaLR	1	455	(12)	363573
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
353	20.7	0.0	5.8	chr1	244893696	244893782	(4062640)	C	HAL1	LINE/L1	(0)	2507	2426	364986
987	18.4	1.6	3.2	chr1	244893787	244893966	(4062456)	+	MLT1G3	LTR/ERVL-MaLR	1	177	(418)	364987
310	11.1	0.0	0.0	chr1	244893967	244894011	(4062411)	C	MLT2B2	LTR/ERVL	(0)	562	518	364988
1700	16.7	0.3	3.1	chr1	244894030	244894322	(4062100)	C	AluJb	SINE/Alu	(22)	290	6	364989
2350	10.1	0.0	0.0	chr1	244910504	244910801	(4045621)	+	AluSc	SINE/Alu	1	298	(11)	365033
599	25.3	13.4	2.0	chr1	245121274	245121471	(3834951)	C	MLT1K	LTR/ERVL-MaLR	(22)	573	350	365508
2235	9.9	1.0	2.2	chr1	245121889	245122201	(3834221)	C	AluSz	SINE/Alu	(2)	310	2	365509
750	22.3	5.8	6.2	chr1	246689572	246689829	(2266593)	+	LTR41	LTR/ERVL	24	280	(488)	367916
1084	20.1	17.2	0.0	chr1	246689888	246690161	(2266261)	+	LTR41	LTR/ERVL	438	768	(0)	367916
1559	31.3	11.3	6.9	chr1	248859306	248860350	(96072)	+	L2a	LINE/L2	1651	2699	(720)	370897
2420	15.5	5.3	0.5	chr10	5253860	5254268	(128543154)	C	MSTB1	LTR/ERVL-MaLR	(2)	430	1	377454
399	29.0	4.0	3.7	chr10	6767121	6767359	(127030063)	+	L1ME4a	LINE/L1	5743	5907	(217)	380041
1626	15.2	1.0	3.7	chr10	6767437	6767732	(127029690)	C	AluJo	SINE/Alu	(22)	290	3	380042
2201	11.4	0.0	2.6	chr10	8573763	8574069	(125223353)	C	AluSx1	SINE/Alu	(12)	300	2	383004
463	34.1	8.1	12.0	chr10	8574510	8574948	(125222474)	C	L2	LINE/L2	(549)	2870	2450	383005
259	33.7	2.5	3.1	chr10	13016511	13016691	(120780731)	C	MIR3	SINE/MIR	(64)	198	15	389961
34	16.7	6.0	1.1	chr10	14174239	14174321	(119623101)	+	(CT)n	Simple_repeat	1	88	(0)	392027
37	2.4	2.4	0.0	chr10	14174535	14174576	(119622846)	+	(TTCA)n	Simple_repeat	1	43	(0)	392028
302	25.5	10.8	4.7	chr10	14272187	14272334	(119525088)	C	MLT1I	LTR/ERVL-MaLR	(166)	245	88	392198
1071	25.0	2.3	5.5	chr10	14951569	14951896	(118845526)	C	MLT1A	LTR/ERVL-MaLR	(49)	325	4	393350
225	22.0	10.8	7.1	chr10	15210449	15210546	(118586876)	C	UCON132b	DNA/hAT-Tip100	(45)	103	2	393847
15	25.3	1.5	4.5	chr10	17616954	17617019	(116180403)	+	(GCCCCCT)n	Simple_repeat	1	67	(0)	397752
11	27.1	2.3	0.0	chr10	19246291	19246334	(114551088)	+	(TTGTATT)n	Simple_repeat	1	45	(0)	400313
2258	14.2	4.0	1.5	chr10	21380156	21380548	(112416874)	+	MLT1A1	LTR/ERVL-MaLR	1	403	(5)	403561
15	23.6	2.2	0.0	chr10	21526167	21526211	(112271211)	+	G-rich	Low_complexity	1	46	(0)	403871
18	13.2	0.0	0.0	chr10	21526217	21526249	(112271173)	+	(GGGAG)n	Simple_repeat	1	33	(0)	403872
7748	20.4	4.7	6.3	chr10	21933382	21933681	(111863741)	+	L1M4	LINE/L1	545	936	(6684)	404547
6337	12.4	8.3	2.2	chr10	21933682	21934833	(111862589)	+	Tigger3b	DNA/TcMar-Tigger	2	1230	(1)	404551
28	10.8	0.0	0.0	chr10	21953822	21953862	(111843560)	+	(A)n	Simple_repeat	1	41	(0)	404584
2122	20.3	12.5	2.5	chr10	22897093	22897751	(110899671)	C	LTR48	LTR/ERV1	(21)	766	8	405957
523	22.5	6.2	8.1	chr10	23343538	23343735	(110453687)	C	MIR	SINE/MIR	(65)	197	4	406651
48	23.9	4.2	4.7	chr10	23344117	23344368	(110453054)	+	G-rich	Low_complexity	1	250	(0)	406652
12607	9.5	2.5	0.9	chr10	25202259	25204867	(108592555)	C	L1PA5	LINE/L1	(7)	6147	3304	409884
876	25.5	9.1	7.2	chr10	26407662	26408320	(107389102)	+	L1MEg	LINE/L1	5	787	(5297)	411579
431	30.1	9.2	1.8	chr10	28130202	28130421	(105667001)	C	MIRc	SINE/MIR	(20)	248	11	414517
2189	9.7	0.3	0.3	chr10	28382245	28382532	(105414890)	C	AluSx	SINE/Alu	(16)	296	9	414966
1969	13.9	0.0	1.0	chr10	28492812	28493105	(105304317)	+	AluJr	SINE/Alu	1	291	(21)	415232
15	0.0	0.0	4.3	chr10	28664280	28664302	(105133120)	+	(ATT)n	Simple_repeat	1	23	(0)	415526
554	19.5	3.8	0.8	chr10	30392874	30393002	(103404420)	C	MER94	DNA/hAT-Blackjack	(1)	133	1	418609
489	22.8	10.2	0.0	chr10	30935108	30935230	(102862192)	C	MIRc	SINE/MIR	(63)	205	69	419573
2113	13.8	8.8	3.9	chr10	30935233	30935614	(102861808)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	28	419574
19846	16.2	3.7	2.5	chr10	36295227	36297366	(97500056)	C	L1MA3	LINE/L1	(5337)	2228	16	427781
1473	24.9	14.8	2.7	chr10	44865190	44865960	(88931462)	+	L1MEc	LINE/L1	48	927	(5473)	435328
321	27.1	8.9	1.5	chr10	44933133	44933267	(88864155)	C	MER91A	DNA/hAT-Tip100	(36)	160	15	435436
1634	14.1	7.9	0.7	chr10	45008874	45009165	(88788257)	C	Tigger4b	DNA/TcMar-Tigger	(0)	361	47	435524
308	31.7	5.2	4.1	chr10	45235184	45235354	(88562068)	C	MER5B	DNA/hAT-Charlie	(4)	174	2	435856
2610	8.0	0.0	0.0	chr10	45235489	45235787	(88561635)	+	AluSq2	SINE/Alu	1	299	(14)	435857
688	25.7	12.9	1.4	chr10	50462371	50462650	(83334772)	+	Kanga2_a	DNA/TcMar-Tc2	41	357	(531)	443391
374	31.6	4.9	0.0	chr10	50462658	50462774	(83334648)	+	HAL1	LINE/L1	8	130	(2377)	443392
4931	15.2	3.5	2.5	chr10	50462989	50464194	(83333228)	+	L1MB2	LINE/L1	4951	6171	(0)	443393
2505	13.6	10.1	0.0	chr10	51723653	51724086	(82073336)	+	Ricksha_c	DNA/MULE-MuDR	14	496	(1552)	445256
2608	15.2	0.5	1.6	chr10	51724094	51724534	(82072888)	+	Ricksha	DNA/MULE-MuDR	1191	1626	(1620)	445257
2202	18.6	5.3	5.7	chr10	52018687	52018914	(81778508)	C	MER67D	LTR/ERV1	(4)	510	263	445718
1753	18.1	9.5	1.0	chr10	52018915	52019309	(81778113)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	445719
2202	18.6	5.3	5.7	chr10	52019310	52019587	(81777835)	C	MER67D	LTR/ERV1	(252)	262	6	445718
210	24.1	5.3	0.0	chr10	52099511	52099564	(81697858)	+	MamTip2	DNA/hAT-Tip100	160	216	(89)	445826
278	19.1	0.0	0.0	chr10	52607285	52607331	(81190091)	+	L1MB7	LINE/L1	4889	4935	(1211)	446511
27	0.0	0.0	0.0	chr10	52607332	52607357	(81190065)	+	(T)n	Simple_repeat	1	26	(0)	446513
3780	18.9	7.3	1.1	chr10	52607382	52607857	(81189565)	+	L1MB7	LINE/L1	4921	5430	(754)	446511
5554	13.1	14.7	1.5	chr10	58255759	58256825	(75540597)	+	MER11B	LTR/ERVK	1	1232	(4)	453865
2874	9.8	1.6	1.1	chr10	58310207	58310651	(75486771)	+	L1MA2	LINE/L1	5858	6304	(0)	453937
7005	18.1	0.6	0.3	chr10	58464546	58465768	(75331654)	C	L1PBa	LINE/L1	(5305)	1558	333	454185
1127	13.2	0.0	0.0	chr10	58465772	58465930	(75331492)	+	THE1B	LTR/ERVL-MaLR	1	159	(205)	454186
550	30.6	2.3	1.4	chr10	58465953	58466164	(75331258)	+	MER103C	DNA/hAT-Charlie	84	297	(0)	454187
7859	19.9	9.8	11.2	chr10	60156116	60157039	(73640383)	+	L1MA4	LINE/L1	598	2219	(5346)	456667
2461	8.1	0.3	0.0	chr10	60157040	60157335	(73640087)	C	AluSp	SINE/Alu	(15)	298	2	456669
230	35.6	8.8	2.0	chr10	62037323	62037471	(71759951)	+	MIR1_Amn	SINE/MIR	2	161	(69)	459463
910	20.8	2.1	0.5	chr10	63171602	63171785	(70625637)	+	MER5A	DNA/hAT-Charlie	3	189	(0)	461299
14	15.2	0.0	7.1	chr10	63521224	63521265	(70276157)	+	(GCCCTG)n	Simple_repeat	1	42	(0)	461935
13	27.7	1.5	4.5	chr10	63521301	63521323	(70276099)	+	G-rich	Low_complexity	1	66	(0)	461936
17	8.3	4.8	4.5	chr10	63521324	63521365	(70276057)	+	(GGCG)n	Simple_repeat	1	44	(0)	461937
29	22.2	5.7	3.8	chr10	63521784	63521907	(70275515)	+	(GCG)n	Simple_repeat	1	131	(0)	461939
1951	18.0	10.1	0.3	chr10	63884912	63885279	(69912143)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	462563
21435	14.4	3.0	1.9	chr10	65514758	65520598	(68276824)	C	L1MA3	LINE/L1	(1653)	5912	21	464848
374	32.0	0.0	6.7	chr10	67513927	67514028	(66283394)	+	MIR3	SINE/MIR	53	148	(60)	467549
1978	14.5	3.9	0.0	chr10	67514029	67514324	(66283098)	+	AluSx3	SINE/Alu	1	308	(3)	467550
1207	29.9	7.6	0.9	chr10	68139796	68140247	(65657175)	C	L2a	LINE/L2	(7)	3419	2935	468590
12	0.0	4.3	4.2	chr10	69123850	69123872	(64673550)	+	(TCCT)n	Simple_repeat	1	24	(0)	470925
4397	15.2	2.7	7.4	chr10	70044915	70045872	(63751550)	+	L1MA9	LINE/L1	4836	5777	(535)	472651
1172	13.8	10.5	0.4	chr10	70062792	70063021	(63734401)	+	L1PB1	LINE/L1	5905	6151	(0)	472677
275	11.6	2.3	0.0	chr10	70232747	70232789	(63564633)	+	MIR3	SINE/MIR	113	156	(52)	473005
285	30.1	6.0	2.5	chr10	70779865	70780024	(63017398)	C	MIR3	SINE/MIR	(13)	195	30	474108
260	33.6	1.8	6.8	chr10	71229916	71230033	(62567389)	C	MIRc	SINE/MIR	(42)	226	115	474834
70	14.8	2.6	3.2	chr10	71887598	71887748	(61909674)	+	(AT)n	Simple_repeat	1	155	(0)	476111
294	23.1	4.2	1.1	chr10	71887989	71888080	(61909342)	C	MER5B	DNA/hAT-Charlie	(0)	178	84	476112
413	35.3	6.5	6.2	chr10	72270490	72270779	(61526643)	C	L2b	LINE/L2	(0)	3375	3085	476920
498	25.9	2.5	5.4	chr10	72525757	72525923	(61271499)	C	MIR	SINE/MIR	(97)	165	4	477436
2271	11.3	0.0	0.0	chr10	74020569	74020861	(59776561)	+	AluJb	SINE/Alu	11	303	(9)	480409
210	33.6	16.8	3.0	chr10	74021058	74021287	(59776135)	+	L2c	LINE/L2	3015	3282	(105)	480410
2089	13.6	0.0	2.6	chr10	75138952	75139260	(58658162)	C	AluSq2	SINE/Alu	(4)	309	9	482502
237	16.3	0.0	0.0	chr10	75139362	75139404	(58658018)	+	L1ME4a	LINE/L1	5621	5663	(461)	482503
378	26.2	13.0	0.0	chr10	75139447	75139606	(58657816)	+	L1ME4a	LINE/L1	5754	5937	(187)	482503
377	31.3	6.7	4.3	chr10	75246085	75246423	(58550999)	+	MER102c	DNA/hAT-Charlie	15	331	(0)	482733
893	26.8	9.9	3.3	chr10	75359525	75359890	(58437532)	+	MLT1K	LTR/ERVL-MaLR	4	396	(199)	482972
213	26.9	6.3	4.6	chr10	75532497	75532605	(58264817)	+	MamRTE1	LINE/RTE-BovB	3632	3742	(70)	483247
568	27.2	1.3	2.6	chr10	75532726	75532876	(58264546)	+	MER5A	DNA/hAT-Charlie	41	189	(0)	483248
421	33.7	1.6	5.0	chr10	75826166	75826365	(57971057)	C	MIR3	SINE/MIR	(12)	196	4	483659
1893	19.8	3.2	2.2	chr10	76839778	76840181	(56957241)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	485036
237	28.4	1.2	0.0	chr10	76840194	76840274	(56957148)	C	MER58B	DNA/hAT-Charlie	(241)	100	19	485037
450	28.2	9.8	8.3	chr10	77122463	77122896	(56674526)	+	L1M6	LINE/L1	1201	1638	(4858)	485367
48	0.0	0.0	0.0	chr10	77663564	77663604	(56133818)	+	(AC)n	Simple_repeat	1	41	(0)	486358
1130	27.1	5.3	10.4	chr10	77663605	77663922	(56133500)	C	L1MC5a	LINE/L1	(2217)	560	272	486357
2231	11.5	6.2	0.5	chr10	77756243	77756393	(56041029)	+	L1M2	LINE/L1	5491	5641	(656)	486533
1603	14.4	11.1	3.4	chr10	77756391	77756832	(56040590)	+	L1M3f	LINE/L1	1648	2123	(4442)	486538
282	27.2	10.5	3.5	chr10	77847343	77847483	(55949939)	C	L3	LINE/CR1	(222)	3877	3726	486670
281	28.3	7.6	5.8	chr10	78042333	78042486	(55754936)	+	MIRc	SINE/MIR	95	251	(17)	487048
194	31.6	1.7	0.0	chr10	79000312	79000368	(54797054)	+	L2b	LINE/L2	3228	3285	(90)	488854
419	30.7	4.1	4.1	chr10	79000470	79000666	(54796756)	C	MIRc	SINE/MIR	(52)	216	20	488855
17	24.4	0.0	2.0	chr10	79070492	79070541	(54726881)	+	G-rich	Low_complexity	1	50	(0)	489003
25	22.8	1.3	2.6	chr10	79070825	79070899	(54726523)	+	(CCTC)n	Simple_repeat	1	76	(0)	489004
208	34.3	7.5	2.0	chr10	79265846	79265946	(54531476)	+	MIR3	SINE/MIR	81	187	(21)	489351
235	28.2	14.7	0.0	chr10	79266111	79266220	(54531202)	C	MIR3	SINE/MIR	(35)	173	45	489352
203	33.3	5.4	2.2	chr10	79905402	79905490	(53891932)	C	MIR3	SINE/MIR	(93)	115	24	490308
8503	19.5	3.1	2.5	chr10	79979246	79981467	(53815955)	+	L1M1	LINE/L1	16	2640	(4925)	490405
510	24.6	12.6	1.6	chr10	80325575	80325790	(53471632)	+	L1ME3Cz	LINE/L1	458	630	(367)	491032
778	24.6	6.9	2.7	chr10	80325790	80326101	(53471321)	+	L1ME3Cz	LINE/L1	703	996	(1)	491033
280	36.6	9.8	2.4	chr10	85871987	85872316	(47925106)	+	LTR101_Mam	LTR/ERVL	153	509	(320)	498655
496	29.2	7.4	6.4	chr10	86126620	86126952	(47670470)	+	MER102a	DNA/hAT-Charlie	1	326	(4)	499026
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
961	23.1	6.0	0.8	chr10	86377574	86377809	(47419613)	C	MIR	SINE/MIR	(3)	259	11	499386
2430	14.9	4.7	2.5	chr10	86829917	86830390	(46967032)	C	MER31A	LTR/ERV1	(0)	485	1	500243
1958	22.6	8.3	3.2	chr10	86922467	86922991	(46874431)	C	MER68	LTR/ERVL	(8)	555	2	500419
219	29.0	5.3	1.3	chr10	89002225	89002320	(44795102)	+	MIRc	SINE/MIR	20	116	(92)	503703
16	21.3	0.0	0.0	chr10	89002447	89002479	(44794943)	+	(CT)n	Simple_repeat	1	33	(0)	503704
701	26.7	4.9	3.1	chr10	89002576	89002826	(44794596)	C	MIRb	SINE/MIR	(0)	268	16	503705
12155	16.8	3.1	0.5	chr10	89041367	89041890	(44755532)	C	L1MA3	LINE/L1	(5267)	2298	1757	503765
62	0.0	0.0	0.0	chr10	89041891	89041943	(44755479)	+	(TC)n	Simple_repeat	1	53	(0)	503766
12155	16.8	3.1	0.5	chr10	89041944	89043638	(44753784)	C	L1MA3	LINE/L1	(5809)	1756	19	503765
241	33.0	4.8	2.5	chr10	89260283	89260403	(44537019)	C	L2b	LINE/L2	(8)	3367	3244	504114
605	26.7	7.1	2.5	chr10	89701886	89702085	(44095337)	+	MIR	SINE/MIR	51	260	(2)	504845
1373	16.8	8.4	11.7	chr10	91785948	91786226	(42011196)	+	MLT1A1	LTR/ERVL-MaLR	1	287	(121)	507851
1965	8.0	3.4	1.7	chr10	91786227	91786519	(42010903)	C	L1MA2	LINE/L1	(0)	6304	6007	507852
404	22.9	8.3	0.0	chr10	92118522	92118643	(41678779)	+	L1MC4	LINE/L1	7512	7644	(398)	508417
2028	16.1	4.4	1.8	chr10	92214084	92214480	(41582942)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	508600
2212	11.8	0.0	1.0	chr10	92214489	92214784	(41582638)	C	AluSx	SINE/Alu	(18)	294	2	508601
20	16.7	0.0	0.0	chr10	93702254	93702287	(40095135)	+	A-rich	Low_complexity	1	34	(0)	511623
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
224	22.0	10.6	0.0	chr10	95273486	95273544	(38523878)	+	MIR3	SINE/MIR	138	203	(5)	513996
1028	28.7	2.9	1.2	chr10	95273550	95273887	(38523535)	+	L4_C_Mam	LINE/RTE-X	1635	1978	(3160)	513997
359	25.8	0.0	4.7	chr10	95273972	95274077	(38523345)	+	L4_C_Mam	LINE/RTE-X	2165	2265	(2873)	513997
11	17.2	7.7	0.0	chr10	96720027	96720065	(37077357)	+	(TCGCCTC)n	Simple_repeat	1	42	(0)	516502
15	25.1	2.8	4.1	chr10	96720434	96720504	(37076918)	+	G-rich	Low_complexity	1	73	(0)	516503
12	15.7	2.6	5.0	chr10	96720577	96720615	(37076807)	+	(GCCCGCG)n	Simple_repeat	1	40	(0)	516504
2231	8.6	3.2	1.0	chr10	96856057	96856360	(36941062)	C	AluSx3	SINE/Alu	(0)	311	1	516851
35	19.1	3.5	5.0	chr10	96856377	96856491	(36940931)	+	(TCCT)n	Simple_repeat	1	119	(0)	516852
31	18.2	7.8	3.2	chr10	96856492	96856509	(36940913)	+	(TCCCT)n	Simple_repeat	1	139	(0)	516853
361	10.4	0.0	0.0	chr10	96856551	96856598	(36940824)	C	AluJb	SINE/Alu	(22)	280	233	516854
1084	16.8	0.6	1.1	chr10	96856601	96856775	(36940647)	C	AluJb	SINE/Alu	(137)	175	2	516854
432	28.5	8.3	2.9	chr10	96911042	96911093	(36886329)	C	MIR	SINE/MIR	(6)	256	194	516968
2341	11.2	0.3	0.0	chr10	96911094	96911396	(36886026)	C	AluSz6	SINE/Alu	(8)	304	1	516969
437	28.9	3.8	0.7	chr10	97497898	97498050	(36299372)	+	MIRc	SINE/MIR	3	160	(108)	518102
869	14.6	0.8	0.0	chr10	97810214	97810336	(35987086)	C	AluJo	SINE/Alu	(188)	124	1	518795
1045	27.9	11.0	7.2	chr10	97810425	97810964	(35986458)	+	MLT1L	LTR/ERVL-MaLR	43	605	(5)	518796
7556	17.4	3.6	5.2	chr10	99283519	99284445	(34512977)	+	L1M4	LINE/L1	3165	4055	(2091)	521181
1090	13.3	1.8	11.8	chr10	99284433	99284687	(34512735)	+	L1M4	LINE/L1	4940	5168	(978)	521181
1588	16.7	1.5	0.4	chr10	99846493	99846750	(33950672)	+	AluJb	SINE/Alu	38	298	(14)	522195
180	32.2	18.3	2.6	chr10	100342669	100342824	(33454598)	+	L2c	LINE/L2	3018	3203	(184)	523181
2035	11.6	0.0	0.0	chr10	100342850	100343117	(33454305)	+	AluSz	SINE/Alu	10	277	(35)	523182
14	5.0	0.0	0.0	chr10	100654762	100654782	(33142640)	+	(CGC)n	Simple_repeat	1	21	(0)	523736
500	28.3	11.3	4.2	chr10	102153071	102153313	(31644109)	+	MIRb	SINE/MIR	3	267	(1)	526386
606	30.2	2.5	1.7	chr10	103193688	103193923	(30603499)	+	MIR	SINE/MIR	15	252	(10)	528388
403	32.5	9.8	2.2	chr10	103194034	103194345	(30603077)	C	L3	LINE/CR1	(235)	3864	3527	528389
225	19.4	6.1	0.0	chr10	103599171	103599232	(30198190)	+	CR1-3_Croc	LINE/CR1	3539	3604	(1)	529284
1646	21.8	8.4	3.7	chr10	106355200	106355717	(27441705)	+	LTR55	LTR/ERVL?	3	547	(1)	533569
390	35.6	0.5	2.6	chr10	106355793	106355985	(27441437)	+	X7C_LINE	LINE/CR1	41	229	(7)	533570
331	31.8	6.8	0.5	chr10	107022960	107023152	(26774270)	+	MIRb	SINE/MIR	24	229	(39)	534654
249	25.3	5.7	0.3	chr10	107023185	107023266	(26774156)	C	MIRc	SINE/MIR	(117)	91	8	534655
15	9.8	0.0	0.0	chr10	110008850	110008871	(23788551)	+	(AC)n	Simple_repeat	1	22	(0)	538776
227	32.6	0.0	1.0	chr10	110458909	110459004	(23338418)	+	Charlie24	DNA/hAT-Charlie	2353	2447	(3)	539555
616	31.1	3.2	2.8	chr10	112203669	112203916	(21593506)	C	MIRb	SINE/MIR	(16)	252	4	542276
22	10.1	0.0	0.0	chr10	112204241	112204272	(21593150)	+	(T)n	Simple_repeat	1	32	(0)	542277
1795	13.2	6.0	3.1	chr10	113851723	113852011	(19945411)	C	AluJb	SINE/Alu	(14)	298	1	544976
478	25.7	11.6	4.7	chr10	114337156	114337388	(19460034)	+	MIRb	SINE/MIR	17	267	(1)	545769
10340	24.1	5.4	2.9	chr10	115417708	115420039	(18377383)	+	L1MA6	LINE/L1	1776	4175	(3387)	547418
266	32.6	4.2	1.1	chr10	115677026	115677118	(18120304)	+	L2a	LINE/L2	3331	3426	(0)	547727
2172	20.9	2.0	5.8	chr10	115677211	115677392	(18120030)	C	LTR55	LTR/ERVL?	(5)	543	366	547732
2874	6.0	0.0	0.0	chr10	115677393	115677745	(18119677)	+	THE1A	LTR/ERVL-MaLR	1	353	(2)	547733
2464	8.4	0.0	0.3	chr10	116228701	116229010	(17568412)	+	AluSg7	SINE/Alu	1	309	(0)	548463
2213	21.2	4.0	4.3	chr10	116229011	116229222	(17568200)	+	MLT1D	LTR/ERVL-MaLR	303	505	(0)	548462
2353	11.4	0.0	0.0	chr10	116747717	116748024	(17049398)	+	AluSq	SINE/Alu	1	308	(5)	549289
317	26.3	6.9	0.0	chr10	116748032	116748126	(17049296)	C	MIRc	SINE/MIR	(137)	131	30	549285
4421	18.1	4.8	2.8	chr10	117056843	117059159	(16738263)	+	L1MB3	LINE/L1	4189	6416	(3)	549774
15	14.4	0.0	0.0	chr10	117139141	117139164	(16658258)	+	(GA)n	Simple_repeat	1	24	(0)	549932
16	0.0	0.0	0.0	chr10	117139198	117139214	(16658208)	+	(A)n	Simple_repeat	1	17	(0)	549933
377	16.5	6.6	1.2	chr10	119724815	119724900	(14072522)	+	LTR9D	LTR/ERV1	469	559	(86)	554471
17	0.0	0.0	0.0	chr10	119724901	119724919	(14072503)	+	(A)n	Simple_repeat	1	19	(0)	554472
194	25.5	0.0	0.0	chr10	119725071	119725121	(14072301)	C	MIR3	SINE/MIR	(96)	112	62	554473
203	32.1	0.0	6.9	chr10	119893195	119893281	(13904141)	C	L2c	LINE/L2	(7)	3380	3300	554757
2486	7.8	0.0	0.0	chr10	119893515	119893798	(13903624)	C	AluSx1	SINE/Alu	(7)	305	22	554758
565	28.0	0.0	1.7	chr10	120966502	120966679	(12830743)	+	MER5B	DNA/hAT-Charlie	1	175	(3)	556435
1840	17.9	14.2	0.5	chr10	120967021	120967446	(12829976)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	12	556436
12	22.5	2.3	2.3	chr10	121184644	121184686	(12612736)	+	(CCTTC)n	Simple_repeat	1	44	(0)	556761
1263	23.6	8.0	2.1	chr10	121407672	121408060	(12389362)	+	MLT1C	LTR/ERVL-MaLR	54	467	(0)	557109
229	32.8	1.6	0.8	chr10	121408067	121408192	(12389230)	C	MIRb	SINE/MIR	(61)	207	81	557110
1774	18.6	5.3	9.3	chr10	121660069	121660382	(12137040)	C	MLT2D	LTR/ERVL	(0)	414	119	557503
961	21.8	10.7	2.7	chr10	121828291	121828685	(11968737)	C	MLT1H2	LTR/ERVL-MaLR	(0)	489	75	557768
18	12.0	0.0	0.0	chr10	121927328	121927354	(11870068)	+	(T)n	Simple_repeat	1	27	(0)	557958
226	28.3	6.1	3.2	chr10	122120631	122120725	(11676697)	+	L2a	LINE/L2	3317	3414	(12)	558363
2139	10.8	2.3	1.9	chr10	122120753	122121059	(11676363)	C	AluSx	SINE/Alu	(4)	308	1	558364
323	23.2	2.4	0.0	chr10	124296323	124296404	(9501018)	C	MER5A1	DNA/hAT-Charlie	(80)	86	3	561650
1719	23.7	11.8	2.1	chr10	124296665	124297186	(9500236)	C	MLT1G	LTR/ERVL-MaLR	(9)	582	4	561651
14	28.9	1.8	1.7	chr10	125160234	125160290	(8637132)	+	(GGC)n	Simple_repeat	1	58	(0)	563049
18	29.8	0.0	4.0	chr10	125160363	125160437	(8636985)	+	(GGC)n	Simple_repeat	1	75	(0)	563050
15	16.6	0.0	0.0	chr10	125160530	125160556	(8636866)	+	(AC)n	Simple_repeat	1	27	(0)	563051
49	27.0	2.6	2.6	chr10	125160575	125160764	(8636658)	+	(CTCCC)n	Simple_repeat	1	195	(0)	563052
16	15.3	0.0	5.0	chr10	125161208	125161247	(8636175)	+	(GCGG)n	Simple_repeat	1	40	(0)	563054
342	32.4	2.2	0.7	chr10	125227540	125227676	(8569746)	+	MIR	SINE/MIR	14	152	(110)	563177
280	23.9	12.4	4.9	chr10	125633499	125633661	(8163761)	C	L1ME4c	LINE/L1	(39)	791	615	563809
2257	6.6	3.6	2.0	chr10	126249418	126249718	(7547704)	+	AluY	SINE/Alu	1	306	(5)	564609
194	33.1	13.4	0.0	chr10	126249896	126249981	(7547441)	+	L2c	LINE/L2	3246	3349	(38)	564610
39	4.6	0.0	0.0	chr10	129949992	129950036	(3847386)	+	(AGGAGGG)n	Simple_repeat	1	45	(0)	568916
13	18.6	2.6	0.0	chr10	129950037	129950070	(3847352)	+	G-rich	Low_complexity	4	38	(0)	568917
1936	14.6	0.3	0.7	chr10	130138057	130138358	(3659064)	C	AluJb	SINE/Alu	(11)	301	1	569163
3069	24.8	0.9	0.4	chr10	132500613	132501388	(1296034)	+	L1MB3	LINE/L1	5400	6179	(4)	571715
454	25.6	14.5	1.6	chr10	132536528	132536773	(1260649)	+	MER33	DNA/hAT-Charlie	15	297	(27)	571753
332	28.5	10.1	1.6	chr10	133524937	133525118	(272304)	+	L1ME3G	LINE/L1	4357	4555	(2089)	572597
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
730	17.6	10.8	1.0	chr11	335938	336138	(134750484)	+	MER39	LTR/ERV1	485	707	(0)	573272
554	30.7	15.4	1.7	chr11	336168	336648	(134749974)	+	MER34B	LTR/ERV1	7	565	(0)	573273
645	22.1	11.2	0.6	chr11	505269	505590	(134581032)	+	MLT1D	LTR/ERVL-MaLR	13	435	(70)	573467
1310	13.9	1.7	4.6	chr11	505629	505865	(134580757)	C	AluJb	SINE/Alu	(82)	230	1	573468
2076	6.6	0.8	0.0	chr11	505875	506130	(134580492)	C	AluSq2	SINE/Alu	(7)	306	49	573469
3887	11.8	0.6	0.0	chr11	2481492	2482015	(132604607)	+	MER1A	DNA/hAT-Charlie	1	527	(2)	575848
357	23.4	15.8	10.7	chr11	3807608	3807691	(131278931)	+	MIR	SINE/MIR	163	259	(3)	577747
13	12.1	7.7	2.4	chr11	3855142	3855180	(131231442)	+	(GGAGCTG)n	Simple_repeat	1	42	(0)	577859
13	0.0	5.0	0.0	chr11	6251337	6251356	(128835266)	+	(CTTC)n	Simple_repeat	1	21	(0)	581019
279	15.4	3.7	0.0	chr11	6318380	6318431	(128768191)	+	L2a	LINE/L2	3368	3421	(5)	581120
15	18.2	1.8	6.9	chr11	6318695	6318704	(128767918)	+	(AACAAC)n	Simple_repeat	1	24	(34)	581121
16	8.9	8.3	0.0	chr11	6318705	6318740	(128767882)	+	(ACACAC)n	Simple_repeat	1	39	(0)	581122
15	18.2	1.8	6.9	chr11	6318741	6318751	(128767871)	+	(AACAAC)n	Simple_repeat	25	58	(0)	581121
589	25.4	4.4	1.7	chr11	7117170	7117345	(127969277)	+	MIR	SINE/MIR	24	204	(58)	582257
16	20.5	0.0	2.4	chr11	7871686	7871726	(127214896)	+	(ATT)n	Simple_repeat	1	41	(0)	583178
407	25.8	2.9	4.9	chr11	9265800	9265961	(125820661)	C	MIRc	SINE/MIR	(103)	165	1	585334
11	25.1	0.0	4.3	chr11	10735663	10735708	(124350914)	+	(CCCCCCT)n	Simple_repeat	1	46	(0)	588042
19	0.0	0.0	0.0	chr11	11842840	11842860	(123243762)	+	(T)n	Simple_repeat	1	21	(0)	589843
186	30.2	7.7	0.0	chr11	12109963	12110058	(122976564)	C	MIRc	SINE/MIR	(85)	183	80	590259
13	22.6	4.2	2.0	chr11	12110459	12110506	(122976116)	+	(GCG)n	Simple_repeat	1	50	(0)	590260
350	27.3	5.5	5.5	chr11	12922109	12922187	(122164435)	C	L4_C_Mam	LINE/RTE-X	(180)	4958	4879	591508
2578	1.1	0.0	0.0	chr11	12922188	12922462	(122164160)	C	AluYa5	SINE/Alu	(3)	308	34	591509
575	28.1	6.0	2.9	chr11	13320409	13320650	(121765972)	+	MIR	SINE/MIR	2	251	(11)	592195
426	24.1	5.7	6.3	chr11	13344285	13344426	(121742196)	C	MER91B	DNA/hAT-Tip100	(42)	148	8	592241
193	35.9	4.5	0.0	chr11	13344473	13344578	(121742044)	+	L2c	LINE/L2	3271	3381	(6)	592242
1958	22.4	8.7	7.1	chr11	14349464	14350195	(120736427)	C	L1MC4	LINE/L1	(1265)	6617	5873	593726
2485	12.7	2.7	1.5	chr11	14350203	14350601	(120736021)	+	MSTB1	LTR/ERVL-MaLR	7	410	(22)	593729
2491	20.9	20.3	0.6	chr11	14397786	14398413	(120688209)	+	L1MC4	LINE/L1	7282	8036	(6)	593842
279	31.4	4.4	6.1	chr11	14398544	14398652	(120687970)	C	HAL1	LINE/L1	(2186)	321	218	593852
1242	29.7	9.9	4.2	chr11	14398653	14399155	(120687467)	C	LTR16E1	LTR/ERVL	(0)	538	4	593853
2171	17.8	4.2	0.8	chr11	14916719	14917108	(120169514)	C	MLT1A1	LTR/ERVL-MaLR	(4)	404	1	594684
284	30.0	11.9	3.0	chr11	15519970	15520206	(119566416)	+	L2	LINE/L2	2821	3081	(338)	595648
12	23.9	2.3	2.3	chr11	15520272	15520314	(119566308)	+	(CTCCT)n	Simple_repeat	1	44	(0)	595649
17	13.1	0.0	0.0	chr11	15520301	15520326	(119566296)	+	(T)n	Simple_repeat	1	26	(0)	595650
868	20.8	7.8	0.3	chr11	15520327	15520657	(119565965)	C	L1M5	LINE/L1	(666)	5496	5137	595651
299	31.5	3.0	0.8	chr11	15650552	15650682	(119435940)	C	MIRb	SINE/MIR	(121)	147	14	595885
3984	19.4	11.5	7.7	chr11	16742674	16744066	(118342556)	C	Looper	DNA/PiggyBac	(64)	1493	41	597389
880	16.5	0.0	0.0	chr11	17307071	17307203	(117779419)	C	AluJo	SINE/Alu	(179)	133	1	598551
349	25.0	0.0	8.7	chr11	17722388	17722514	(117364108)	C	MER5B	DNA/hAT-Charlie	(59)	119	4	599205
341	32.6	5.3	2.7	chr11	17760780	17760927	(117325695)	+	MIRb	SINE/MIR	91	242	(26)	599277
2875	19.8	9.2	2.6	chr11	19000001	19000757	(116085865)	C	L1M1	LINE/L1	(6741)	824	13	601476
10056	15.6	4.7	0.4	chr11	19000760	19002634	(116083988)	+	Tigger1	DNA/TcMar-Tigger	4	1963	(455)	601477
416	29.3	15.3	0.0	chr11	19743038	19743259	(115343363)	+	MIRc	SINE/MIR	6	267	(1)	602784
5989	13.3	6.6	2.5	chr11	27075009	27076033	(108010589)	C	L1PB3	LINE/L1	(5128)	1735	666	613370
236	32.4	0.7	8.1	chr11	27202075	27202222	(107884400)	+	AmnSINE1	SINE/5S-Deu-L2	224	360	(215)	613572
282	29.9	1.1	1.1	chr11	27202356	27202443	(107884179)	C	MIRb	SINE/MIR	(3)	265	178	613573
2155	15.5	0.0	0.3	chr11	27601540	27601876	(107484746)	C	MER2B	DNA/TcMar-Tigger	(0)	336	1	614244
1818	27.5	3.2	3.4	chr11	27601888	27602447	(107484175)	C	MER74B	LTR/ERVL	(9)	613	55	614245
238	28.3	8.9	3.4	chr11	28107486	28107602	(106979020)	C	MIRc	SINE/MIR	(63)	205	82	615064
187	38.0	1.6	7.7	chr11	29640695	29640888	(105445734)	C	L2c	LINE/L2	(154)	3233	3052	617327
1595	19.3	7.7	0.9	chr11	30570079	30570418	(104516204)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	618684
13	13.2	0.0	0.0	chr11	32071696	32071720	(103014902)	+	(AATA)n	Simple_repeat	1	25	(0)	620952
335	29.1	9.6	1.4	chr11	32072080	32072222	(103014400)	+	MIRc	SINE/MIR	20	175	(93)	620953
22086	12.0	4.9	1.6	chr11	32748086	32749864	(102336758)	C	L1MA3	LINE/L1	(3955)	3610	1789	622140
2486	8.8	0.0	0.0	chr11	32749865	32750169	(102336453)	C	AluSx3	SINE/Alu	(6)	305	1	622145
438	23.8	7.0	3.9	chr11	33808499	33808651	(101277971)	C	MER5B	DNA/hAT-Charlie	(19)	159	2	624091
235	35.0	8.6	4.2	chr11	33808668	33808834	(101277788)	C	MIR3	SINE/MIR	(19)	189	15	624092
12	9.7	0.0	0.0	chr11	35617736	35617757	(99468865)	+	(TGAA)n	Simple_repeat	1	22	(0)	627048
27	15.1	0.0	6.0	chr11	35618295	35618361	(99468261)	+	G-rich	Low_complexity	1	67	(0)	627049
202	21.3	16.4	0.0	chr11	45105412	45105472	(89981150)	C	MIR3	SINE/MIR	(92)	116	44	641515
17	12.5	0.0	0.0	chr11	45816730	45816755	(89269867)	+	(CA)n	Simple_repeat	1	26	(0)	642837
338	24.7	17.0	3.1	chr11	46062898	46063089	(89023533)	+	L1ME1	LINE/L1	5944	6167	(12)	643222
834	21.6	7.3	4.7	chr11	46063362	46063575	(89023047)	C	MER58A	DNA/hAT-Charlie	(4)	220	1	643223
23	13.7	2.5	0.0	chr11	47508673	47508712	(87577910)	+	(CA)n	Simple_repeat	1	41	(0)	646041
2191	9.1	0.7	0.3	chr11	47508784	47509069	(87577553)	C	AluSq2	SINE/Alu	(26)	287	1	646042
2595	5.6	0.0	0.7	chr11	47996052	47996356	(87090266)	+	AluY	SINE/Alu	1	303	(8)	647318
557	23.4	2.7	11.9	chr11	47996367	47996609	(87090013)	+	MIRb	SINE/MIR	23	242	(26)	647319
13085	11.9	2.5	3.8	chr11	57562076	57563207	(77523415)	+	L1M1	LINE/L1	1209	2332	(5233)	653996
251	33.6	11.0	0.0	chr11	61059330	61059466	(74027156)	+	MIRb	SINE/MIR	114	267	(1)	659419
526	29.7	1.7	2.2	chr11	61059583	61059761	(74026861)	+	MIRc	SINE/MIR	2	179	(89)	659420
301	27.6	7.2	3.7	chr11	61793081	61793242	(73293380)	+	MIRb	SINE/MIR	15	182	(86)	660848
345	30.7	8.7	2.1	chr11	61793450	61793589	(73293033)	C	MIRb	SINE/MIR	(68)	200	51	660849
308	29.7	8.1	3.9	chr11	62563563	62563716	(72522906)	C	L1M5	LINE/L1	(286)	5838	5678	662314
730	16.1	4.5	2.3	chr11	62563951	62564080	(72522542)	C	AluJb	SINE/Alu	(22)	290	158	662315
2375	9.6	0.0	0.0	chr11	62640552	62640853	(72445769)	+	AluY	SINE/Alu	1	302	(9)	662454
2187	11.2	1.3	1.6	chr11	62641057	62641361	(72445261)	+	AluSz	SINE/Alu	1	304	(8)	662455
1160	22.8	7.5	4.5	chr11	62842647	62843022	(72243600)	C	LTR65	LTR/ERV1	(97)	572	185	662924
800	18.4	5.8	0.0	chr11	62907389	62907551	(72179071)	C	MER5A	DNA/hAT-Charlie	(0)	189	17	663092
2176	14.4	4.9	0.5	chr11	63024344	63024756	(72061866)	+	L1MB4	LINE/L1	5748	6179	(1)	663332
2411	9.4	0.0	2.2	chr11	64233222	64233540	(70853082)	C	AluSx1	SINE/Alu	(0)	312	1	665229
17	11.3	5.0	2.4	chr11	64335477	64335516	(70751106)	+	(TAT)n	Simple_repeat	1	42	(0)	665418
475	20.8	7.0	9.4	chr11	64478383	64478528	(70608094)	C	LTR16A1	LTR/ERVL	(41)	415	271	665702
2408	15.9	1.5	1.5	chr11	64478918	64479325	(70607297)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	665704
358	29.7	9.4	7.2	chr11	64799730	64799896	(70286726)	C	MIR	SINE/MIR	(34)	228	58	666233
17	11.7	8.2	4.5	chr11	65027447	65027512	(70059110)	+	(GGCGGA)n	Simple_repeat	1	68	(0)	666697
192	34.4	7.2	0.8	chr11	65308200	65308328	(69778294)	+	L2c	LINE/L2	3238	3375	(0)	667280
182	31.5	1.1	13.2	chr11	65524698	65524803	(69561819)	C	MIRb	SINE/MIR	(76)	192	100	667713
67	24.2	1.5	5.7	chr11	65524835	65525093	(69561529)	+	(CCGCC)n	Simple_repeat	1	263	(0)	667714
547	29.9	9.6	5.7	chr11	66476700	66477130	(68609492)	C	L2c	LINE/L2	(19)	3407	2932	669600
1597	20.3	2.4	0.3	chr11	67146515	67146800	(67939822)	C	AluSx1	SINE/Alu	(18)	294	3	671076
220	20.9	6.9	1.5	chr11	67318344	67318411	(67768211)	+	MIR3	SINE/MIR	115	186	(22)	671398
293	31.9	2.1	0.0	chr11	67629151	67629241	(67457381)	+	MIR1_Amn	SINE/MIR	66	158	(72)	671998
304	24.3	0.0	0.9	chr11	67629552	67629665	(67456957)	C	MIRc	SINE/MIR	(71)	191	86	671999
17	24.9	3.7	3.6	chr11	67629812	67629892	(67456730)	+	(CCGCGG)n	Simple_repeat	1	84	(0)	672000
5815	12.9	2.5	2.3	chr11	67658910	67659904	(67426718)	C	LTR13	LTR/ERVK	(0)	1007	11	672054
11800	8.2	0.7	1.9	chr11	67699574	67701236	(67385386)	+	HERVK11-int	LTR/ERVK	1	1642	(6311)	672119
256	10.5	4.5	0.4	chr11	68816756	68817197	(66269425)	+	(GT)n	Simple_repeat	1	462	(0)	674002
210	29.5	4.0	6.9	chr11	68817380	68817481	(66269141)	C	L2c	LINE/L2	(0)	3387	3289	674003
52	23.8	6.9	4.3	chr11	68817628	68817932	(66268690)	+	G-rich	Low_complexity	1	326	(0)	674004
960	26.1	11.5	1.7	chr11	68998501	68998876	(66087746)	C	MLT1F2	LTR/ERVL-MaLR	(171)	509	1	674365
371	29.7	13.6	0.0	chr11	69674466	69674630	(65411992)	+	MIR	SINE/MIR	64	254	(8)	675471
2435	8.6	0.3	0.6	chr11	69686227	69686540	(65400082)	C	AluSq	SINE/Alu	(0)	313	1	675494
367	32.7	8.4	6.4	chr11	70397654	70398136	(64688486)	+	L2c	LINE/L2	2821	3316	(71)	676802
1157	29.5	7.3	0.7	chr11	70450769	70451174	(64635448)	C	MLT1K	LTR/ERVL-MaLR	(28)	567	133	676877
14335	13.7	3.5	0.2	chr11	71709740	71712562	(63374060)	+	HERVS71-int	LTR/ERV1	4870	7786	(1192)	678661
185	36.6	10.9	1.8	chr11	72648936	72649152	(62437470)	+	L2b	LINE/L2	2752	2990	(429)	680332
215	31.5	0.0	4.3	chr11	72649220	72649312	(62437310)	+	L2a	LINE/L2	3338	3426	(0)	680333
9226	8.3	4.5	0.3	chr11	72905280	72907598	(62179024)	C	L1PA6	LINE/L1	(1)	6304	3888	680831
192	33.8	0.0	2.5	chr11	73137684	73137762	(61948860)	C	L2c	LINE/L2	(283)	3104	3028	681258
487	6.0	0.0	14.3	chr11	73253254	73253311	(61833311)	C	L1MA7	LINE/L1	(0)	6291	6238	681487
226	31.1	7.0	7.7	chr11	73286536	73286678	(61799944)	C	L3	LINE/CR1	(886)	3213	3072	681558
234	29.4	6.4	1.9	chr11	73286644	73286747	(61799875)	C	L2b	LINE/L2	(4)	3371	3263	681559
2357	8.3	0.0	1.9	chr11	73606102	73606414	(61480208)	+	AluSx1	SINE/Alu	1	307	(5)	682218
289	29.2	11.1	1.8	chr11	73606599	73606769	(61479853)	+	MIR	SINE/MIR	20	208	(54)	682219
20	7.2	0.0	0.0	chr11	73761139	73761168	(61325454)	+	(GCGT)n	Simple_repeat	1	30	(0)	682608
220	35.1	3.9	0.7	chr11	74593086	74593234	(60493388)	+	MIRc	SINE/MIR	82	235	(33)	684429
403	33.1	0.0	4.0	chr11	76722056	76722203	(58364419)	C	MIR	SINE/MIR	(112)	150	9	688546
8997	19.7	4.6	5.8	chr11	77566994	77569808	(57516814)	C	L1MA3	LINE/L1	(4405)	3160	22	690163
2321	9.2	0.3	0.0	chr11	77857700	77857993	(57228629)	C	AluSx4	SINE/Alu	(15)	295	1	690743
1192	6.1	0.0	7.9	chr11	77857994	77858049	(57228573)	C	L1PA8	LINE/L1	(108)	6064	6010	690742
958	18.8	0.0	5.4	chr11	77858059	77858244	(57228378)	C	AluJr	SINE/Alu	(52)	260	85	690744
439	21.1	2.7	6.0	chr11	77993782	77993897	(57092725)	+	MER5A1	DNA/hAT-Charlie	49	160	(6)	691057
308	30.8	11.9	1.9	chr11	77994212	77994370	(57092252)	+	MIRc	SINE/MIR	67	243	(25)	691058
273	34.1	0.8	3.1	chr11	78061390	78061519	(57025103)	+	MIRb	SINE/MIR	67	193	(75)	691263
1970	15.8	0.3	1.9	chr11	78061625	78061934	(57024688)	C	AluJb	SINE/Alu	(6)	306	2	691264
9231	23.4	3.8	4.2	chr11	78630049	78631867	(56454755)	C	L1M1	LINE/L1	(4888)	2677	179	692369
203	27.4	5.9	2.0	chr11	79045309	79045417	(56041205)	C	L2b	LINE/L2	(404)	3015	2903	693139
14	12.1	3.6	0.0	chr11	79328582	79328609	(55758013)	+	(GGT)n	Simple_repeat	1	29	(0)	693695
2665	17.0	1.6	9.0	chr11	86560090	86560107	(48526515)	C	L1MC3	LINE/L1	(16)	7769	7754	705752
2412	12.2	2.9	2.1	chr11	86560108	86560485	(48526137)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	705753
238	29.1	4.8	0.0	chr11	87037226	87037304	(48049318)	+	L3	LINE/CR1	3992	4074	(25)	706529
23	28.2	0.0	0.0	chr11	92886329	92886388	(42200234)	+	(GT)n	Simple_repeat	1	60	(0)	714799
2210	16.5	5.6	1.7	chr11	94935452	94935864	(40150758)	+	MSTB1	LTR/ERVL-MaLR	3	432	(0)	717874
21593	13.9	3.5	1.7	chr11	95346176	95352658	(39733964)	+	L1M1	LINE/L1	15	6703	(862)	718495
344	26.4	11.2	5.1	chr11	95460221	95460396	(39626226)	C	MIRb	SINE/MIR	(47)	221	34	718663
919	15.8	0.0	0.0	chr11	95460476	95460608	(39626014)	+	FLAM_C	SINE/Alu	1	133	(10)	718664
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
1331	18.6	5.2	1.3	chr11	102546238	102546552	(32540070)	+	MER34A1	LTR/ERV1	260	587	(0)	728122
10748	12.5	3.5	0.3	chr11	102747467	102749436	(32337186)	C	L1M1	LINE/L1	(3757)	3808	1779	728418
29	0.0	0.0	0.0	chr11	102749461	102749485	(32337137)	+	(TC)n	Simple_repeat	1	25	(0)	728420
2028	17.7	1.1	1.1	chr11	102749487	102749858	(32336764)	C	L1M1	LINE/L1	(7179)	386	15	728418
13851	14.5	3.2	2.6	chr11	103418551	103422959	(31663663)	+	L1PA10	LINE/L1	13	4447	(1884)	729410
451	33.2	3.8	2.2	chr11	103600965	103601195	(31485427)	+	LTR78B	LTR/ERV1	294	528	(768)	729671
343	35.0	5.6	4.8	chr11	103601221	103601469	(31485153)	+	LTR78B	LTR/ERV1	593	843	(453)	729671
891	22.9	9.8	3.2	chr11	103601522	103601833	(31484789)	C	MER39	LTR/ERV1	(79)	628	294	729672
296	28.4	5.8	5.8	chr11	103601713	103601884	(31484738)	C	MER21A	LTR/ERVL	(641)	290	119	729673
324	30.0	11.8	0.0	chr11	107689213	107689332	(27397290)	C	L2c	LINE/L2	(0)	3387	3252	735322
359	29.6	0.0	0.0	chr11	107689437	107689544	(27397078)	+	MIRb	SINE/MIR	153	260	(8)	735323
435	31.1	2.9	6.4	chr11	107689566	107689706	(27396916)	+	L2b	LINE/L2	3235	3370	(5)	735321
508	23.6	17.9	1.0	chr11	108682600	108682992	(26403630)	C	L1MEg	LINE/L1	(4389)	1853	1388	737248
347	27.9	9.2	3.7	chr11	108683106	108683239	(26403383)	C	L1MEg	LINE/L1	(5712)	530	389	737248
227	28.2	17.9	0.0	chr11	108871207	108871316	(26215306)	C	MER94	DNA/hAT-Blackjack	(0)	134	1	737518
2184	10.2	0.7	0.3	chr11	108871647	108871940	(26214682)	+	AluSp	SINE/Alu	1	295	(18)	737519
27	0.0	0.0	0.0	chr11	109422723	109422748	(25663874)	+	(T)n	Simple_repeat	1	26	(0)	738333
351	29.2	7.0	7.0	chr11	110927109	110927395	(24159227)	+	MLT1O	LTR/ERVL-MaLR	105	391	(151)	740568
1918	18.7	4.9	2.2	chr11	111200979	111201333	(23885289)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	741022
2364	12.5	0.3	0.6	chr11	111201443	111201755	(23884867)	C	AluSz	SINE/Alu	(0)	312	1	741023
494	36.7	4.6	1.0	chr11	111860212	111860420	(23226202)	+	MIRc	SINE/MIR	37	253	(15)	742081
578	17.8	3.3	1.7	chr11	112255744	112255863	(22830759)	+	L1ME4a	LINE/L1	5971	6092	(32)	742827
183	20.7	6.8	12.8	chr11	112958732	112958825	(22127797)	C	L3	LINE/CR1	(452)	3647	3560	743904
566	30.6	0.5	0.5	chr11	113532663	113532846	(21553776)	C	MIRb	SINE/MIR	(68)	200	17	744714
512	30.1	4.4	7.7	chr11	113906657	113906915	(21179707)	+	MIR	SINE/MIR	5	254	(8)	745371
2187	12.6	0.0	1.9	chr11	114041258	114041566	(21045056)	C	AluSz	SINE/Alu	(9)	303	1	745654
297	26.8	10.1	2.1	chr11	114480929	114481073	(20605549)	+	LTR84b	LTR/ERVL	244	401	(360)	746348
584	27.1	7.0	1.5	chr11	114481164	114481365	(20605257)	+	LTR84b	LTR/ERVL	548	761	(0)	746348
364	25.4	7.4	5.5	chr11	116461304	116461449	(18625173)	C	MER20	DNA/hAT-Charlie	(19)	200	52	749359
23	11.1	0.0	0.0	chr11	117144738	117144776	(17941846)	+	(GCCCT)n	Simple_repeat	1	39	(0)	750609
243	22.7	9.8	8.3	chr11	117145035	117145154	(17941468)	C	MIR3	SINE/MIR	(12)	196	75	750610
183	20.3	9.2	5.5	chr11	117581057	117581129	(17505493)	C	MIR3	SINE/MIR	(17)	191	116	751390
1835	14.0	4.9	2.4	chr11	118488785	118488988	(16597634)	+	MER2	DNA/TcMar-Tigger	1	218	(127)	753003
14	22.1	4.3	0.0	chr11	119474655	119474701	(15611921)	+	(GGACAG)n	Simple_repeat	1	49	(0)	754935
493	26.7	13.9	0.0	chr11	120172059	120172219	(14914403)	C	MIRb	SINE/MIR	(16)	252	66	756078
184	38.7	3.1	0.0	chr11	120404133	120404225	(14682397)	+	L2	LINE/L2	2317	2412	(1007)	756499
9695	17.0	4.1	2.0	chr11	121262921	121264845	(13821777)	C	L1MB7	LINE/L1	(4603)	2962	655	757843
801	30.3	9.6	3.0	chr11	121328205	121328844	(13757778)	C	L2a	LINE/L2	(4)	3422	2722	757935
33	0.0	0.0	0.0	chr11	122506069	122506104	(12580518)	+	(A)n	Simple_repeat	1	36	(0)	759685
2061	15.5	0.0	0.0	chr11	123164299	123164602	(11922020)	C	AluSx	SINE/Alu	(7)	305	2	760990
250	32.5	4.2	3.4	chr11	123537070	123537187	(11549435)	C	L2c	LINE/L2	(1)	3386	3268	761749
21562	14.2	2.4	3.0	chr11	124914031	124917864	(10168758)	C	L1M1	LINE/L1	(3749)	3816	8	763750
12	13.9	6.2	0.0	chr11	125141856	125141887	(9944735)	+	G-rich	Low_complexity	1	34	(0)	764034
256	31.2	3.1	0.0	chr11	125806805	125806897	(9279725)	C	L1M8	LINE/L1	(2238)	117	22	765106
279	10.9	16.9	1.5	chr11	125807113	125807177	(9279445)	+	L1PB4	LINE/L1	6068	6144	(12)	765107
531	23.7	19.5	0.5	chr11	126533682	126533876	(8552746)	+	MIRb	SINE/MIR	7	247	(21)	766242
21893	10.2	2.4	0.7	chr11	129802986	129808592	(5278030)	+	L1PB1	LINE/L1	252	6020	(842)	770817
22	33.9	3.2	2.3	chr11	130046587	130046711	(5039911)	+	(TA)n	Simple_repeat	1	129	(0)	771262
725	24.1	5.1	4.6	chr11	130046865	130047102	(5039520)	+	L1ME3Cz	LINE/L1	739	978	(19)	771260
1499	14.2	6.8	6.8	chr11	130047143	130047423	(5039199)	+	AluJr4	SINE/Alu	21	301	(11)	771263
198	26.4	1.9	1.9	chr11	130181368	130181421	(4905201)	C	MamRTE1	LINE/RTE-BovB	(1529)	2283	2230	771486
313	31.9	0.0	0.0	chr11	130181696	130181786	(4904836)	+	MIR3	SINE/MIR	77	167	(41)	771488
17	16.9	5.1	4.8	chr11	133928066	133928124	(1158498)	+	(AGC)n	Simple_repeat	1	62	(0)	776539
13	9.7	9.1	0.0	chr11	134324579	134324611	(762011)	+	(TTTGTTC)n	Simple_repeat	1	36	(0)	777094
525	21.2	3.6	0.8	chr12	546869	547001	(132728308)	C	MIR3	SINE/MIR	(52)	156	20	778943
1310	22.2	3.5	1.3	chr12	547183	547492	(132727817)	+	L1MA4A	LINE/L1	5985	6301	(2)	778944
247	24.0	0.0	1.3	chr12	1067313	1067388	(132207921)	C	Tigger9a	DNA/TcMar-Tigger	(83)	649	575	780036
263	28.3	6.1	2.1	chr12	1067759	1067852	(132207457)	C	Tigger9a	DNA/TcMar-Tigger	(610)	122	25	780036
26	15.9	2.5	6.2	chr12	1575317	1575395	(131699914)	+	(ATCT)n	Simple_repeat	1	81	(0)	780900
224	23.2	1.6	0.9	chr12	1604758	1605303	(131670006)	+	(GT)n	Simple_repeat	1	555	(0)	780942
19	5.6	2.3	6.8	chr12	2053028	2053070	(131222239)	+	(GCGGC)n	Simple_repeat	1	44	(0)	781625
13	16.0	0.0	7.3	chr12	2053206	2053246	(131222063)	+	(CCCCT)n	Simple_repeat	1	41	(0)	781626
34	22.3	1.8	4.3	chr12	2959209	2959321	(130315988)	+	(CCCCG)n	Simple_repeat	1	115	(0)	783020
2138	8.7	0.0	0.0	chr12	3063592	3063867	(130211442)	+	AluSx	SINE/Alu	25	300	(12)	783241
1328	28.9	9.8	8.8	chr12	3063868	3063946	(130211363)	+	LTR8A	LTR/ERV1	745	820	(0)	783240
463	18.6	14.8	0.0	chr12	3064059	3064219	(130211090)	C	L1MEf	LINE/L1	(5056)	1144	956	783242
597	21.5	1.1	0.3	chr12	3064242	3064398	(130210911)	C	FLAM_C	SINE/Alu	(96)	206	24	783243
1004	22.5	3.2	2.4	chr12	3073260	3073505	(130201804)	+	MIR	SINE/MIR	13	260	(2)	783260
455	19.1	8.0	0.9	chr12	3073818	3073933	(130201376)	C	MER94	DNA/hAT-Blackjack	(9)	125	1	783261
454	32.6	3.7	11.1	chr12	3116227	3116488	(130158821)	+	MIR	SINE/MIR	9	250	(12)	783347
317	32.7	14.6	0.0	chr12	3116699	3116903	(130158406)	C	L3	LINE/CR1	(223)	3876	3637	783348
2734	9.7	1.3	0.3	chr12	3405014	3405384	(129869925)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	783798
9810	11.9	4.9	3.8	chr12	3405385	3406943	(129868366)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	4	783798
44	6.3	0.0	0.0	chr12	3489808	3489858	(129785451)	+	(CA)n	Simple_repeat	1	51	(0)	783923
13	12.3	5.7	7.1	chr12	3489884	3489936	(129785373)	+	(CTTCTCA)n	Simple_repeat	1	56	(0)	783924
846	27.9	0.9	1.3	chr12	3748977	3749205	(129526104)	+	MIR	SINE/MIR	2	229	(33)	784346
485	27.4	3.0	5.5	chr12	6268508	6268743	(127006566)	C	MLT1M	LTR/ERVL-MaLR	(431)	241	12	788356
24	12.1	0.0	0.0	chr12	6269081	6269116	(127006193)	+	(A)n	Simple_repeat	1	36	(0)	788357
15	29.0	0.0	0.0	chr12	6939111	6939160	(126336149)	+	(CACCAG)n	Simple_repeat	1	50	(0)	789670
2120	12.9	0.0	0.7	chr12	6939501	6939803	(126335506)	C	AluJb	SINE/Alu	(11)	301	1	789671
704	10.4	0.0	0.0	chr12	7118786	7118881	(126156428)	+	U6	snRNA	2	97	(10)	789980
23	16.4	0.0	0.0	chr12	7118897	7118939	(126156370)	+	GA-rich	Low_complexity	1	43	(0)	789981
2681	3.9	0.0	0.7	chr12	8027396	8027704	(125247605)	+	AluY	SINE/Alu	2	308	(3)	791654
3874	22.6	0.4	2.2	chr12	10366614	10367445	(122907864)	+	HERV15-int	LTR/ERV1	4210	5026	(3400)	795150
5282	13.5	5.0	1.9	chr12	10385397	10385908	(122889401)	+	L1MA5	LINE/L1	7191	7718	(1)	795172
336	28.7	7.3	7.6	chr12	10385995	10386337	(122888972)	C	L1MC4a	LINE/L1	(2000)	5882	5541	795174
2680	9.2	1.9	0.8	chr12	12108906	12109276	(121166033)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	797529
9972	14.7	6.6	5.8	chr12	12109277	12109462	(121165847)	+	L1M4c	LINE/L1	1638	1916	(4468)	797526
588	33.4	9.1	5.2	chr12	12510579	12511220	(120764089)	C	L2b	LINE/L2	(9)	3366	2701	798263
232	16.7	1.6	0.0	chr12	12542643	12542702	(120732607)	+	L1MB7	LINE/L1	6124	6184	(0)	798309
1309	20.8	7.1	1.5	chr12	12542801	12543132	(120732177)	+	MLT1A0	LTR/ERVL-MaLR	13	364	(1)	798310
487	25.7	14.7	2.9	chr12	12543150	12543461	(120731848)	+	L1MC4	LINE/L1	7688	8042	(0)	798311
459	31.9	2.3	8.4	chr12	13229827	13230148	(120045161)	C	UCON33	DNA/TcMar-Tigger	(18)	302	1	799559
1979	15.9	0.0	0.0	chr12	13400414	13400709	(119874600)	C	AluSz	SINE/Alu	(16)	296	1	799799
259	22.4	0.0	0.0	chr12	13400712	13400769	(119874540)	+	MamTip1	DNA/hAT-Tip100	151	208	(59)	799800
1900	20.4	5.8	4.2	chr12	13400772	13401268	(119874041)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	799801
626	13.8	0.9	0.0	chr12	14629840	14629948	(118645361)	+	MER53	DNA/hAT	1	110	(83)	801658
194	23.2	5.1	3.5	chr12	14629953	14630010	(118645299)	C	MER5B	DNA/hAT-Charlie	(113)	65	7	801657
1896	17.8	1.2	0.6	chr12	14630387	14630726	(118644583)	+	MER2	DNA/TcMar-Tigger	3	344	(1)	801659
261	34.3	4.0	4.7	chr12	16940026	16940279	(116335030)	C	L1PA15-16	LINE/L1	(5325)	1594	1343	804890
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
9209	4.0	0.2	0.1	chr12	19428978	19430873	(113844436)	C	L1PA4	LINE/L1	(1)	6154	4257	808179
919	15.1	6.5	0.0	chr12	19430874	19431032	(113844277)	+	AluJb	SINE/Alu	134	303	(9)	808178
394	28.6	7.4	6.1	chr12	20218583	20218869	(113056440)	C	ERV3-16A3_I-int	LTR/ERVL	(3037)	1959	1578	809374
4467	21.9	4.1	1.2	chr12	22821745	22822707	(110452602)	+	ERVL-B4-int	LTR/ERVL	4405	5396	(271)	812728
2142	11.5	0.0	3.8	chr12	24284843	24285155	(108990154)	+	AluSx1	SINE/Alu	1	301	(11)	814682
631	26.0	14.8	3.8	chr12	24285156	24285193	(108990116)	+	LTR33A_	LTR/ERVL	486	523	(8)	814679
8908	19.4	4.0	6.9	chr12	25591859	25592182	(107683127)	+	L1MA2	LINE/L1	1756	2107	(5458)	816708
12438	11.8	2.6	0.9	chr12	25592195	25596534	(107678775)	+	L1PBa1	LINE/L1	251	4664	(2198)	816710
2611	5.2	0.0	0.0	chr12	26884398	26884702	(106390607)	+	AluY	SINE/Alu	1	305	(6)	818649
1483	24.9	16.3	2.2	chr12	26884703	26885241	(106390068)	C	LTR41B	LTR/ERVL	(135)	623	1	818645
1645	18.6	0.0	5.5	chr12	29224938	29225249	(104050060)	+	AluJr	SINE/Alu	2	296	(16)	822090
2944	9.4	4.1	0.9	chr12	31630760	31631143	(101644166)	C	MLT2A1	LTR/ERVL	(44)	400	1	825672
510	28.1	3.6	5.6	chr12	31631144	31631429	(101643880)	+	MER34B	LTR/ERV1	286	565	(0)	825671
1215	25.7	5.9	3.2	chr12	31631431	31631840	(101643469)	+	MER90a	LTR/ERV1	106	527	(87)	825674
41180	9.4	0.5	0.1	chr12	34621720	34627344	(98647965)	C	HERVK-int	LTR/ERVK	(759)	6777	1130	830160
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
192	37.6	12.0	3.9	chr12	39053345	39053446	(94221863)	C	L2	LINE/L2	(456)	2963	2864	831885
1428	17.3	3.7	2.5	chr12	39053447	39053766	(94221543)	+	MER33	DNA/hAT-Charlie	1	324	(0)	831886
724	17.3	2.7	3.3	chr12	42203943	42204092	(91071217)	+	FAM	SINE/Alu	35	183	(2)	836192
988	20.7	2.4	0.0	chr12	42204106	42204308	(91071001)	+	L1MB7	LINE/L1	5441	5648	(536)	836193
661	32.4	10.1	0.3	chr12	42687350	42687671	(90587638)	C	L2a	LINE/L2	(1)	3425	3069	837057
337	17.8	0.0	6.4	chr12	42687779	42687856	(90587453)	+	MER96	DNA/hAT-Tip100	103	175	(0)	837058
1041	19.0	17.4	1.1	chr12	43552630	43552911	(89722398)	+	Arthur1C	DNA/hAT-Tip100	23	360	(3)	838223
384	30.7	9.3	4.6	chr12	43653144	43653317	(89621992)	+	MIRb	SINE/MIR	77	259	(9)	838342
439	30.3	3.8	1.3	chr12	43653351	43653504	(89621805)	+	MIRc	SINE/MIR	63	220	(48)	838343
403	32.5	1.9	3.8	chr12	43653516	43653675	(89621634)	C	MIRb	SINE/MIR	(108)	160	4	838344
1355	29.9	12.8	4.8	chr12	43964850	43965540	(89309769)	+	LTR101_Mam	LTR/ERVL	66	820	(9)	838829
274	33.3	0.7	7.4	chr12	44015604	44015765	(89259544)	C	Tigger16b	DNA/TcMar-Tigger	(0)	336	186	838906
15633	13.9	1.8	1.1	chr12	46341201	46343869	(86931440)	C	L1M1	LINE/L1	(4144)	3421	736	842124
12	5.6	0.0	0.0	chr12	46491879	46491897	(86783412)	+	(TAA)n	Simple_repeat	1	19	(0)	842363
897	22.7	1.0	2.0	chr12	46491899	46492096	(86783213)	C	MIR	SINE/MIR	(1)	261	66	842364
249	30.8	3.7	0.0	chr12	46492200	46492277	(86783032)	+	MIR3	SINE/MIR	110	190	(18)	842365
366	32.0	4.7	0.0	chr12	47129645	47129766	(86145543)	C	MLT1M	LTR/ERVL-MaLR	(444)	228	101	843152
207	30.2	7.4	0.0	chr12	47652336	47652398	(85622911)	C	L2a	LINE/L2	(1)	3425	3358	843996
990	23.6	2.7	3.4	chr12	47652472	47652874	(85622435)	C	MLT1A1	LTR/ERVL-MaLR	(30)	378	1	843997
268	24.3	18.3	0.9	chr12	48104550	48104657	(85170652)	C	L2c	LINE/L2	(0)	3387	3257	844709
12	15.6	3.5	0.0	chr12	48295680	48295708	(84979601)	+	GA-rich	Low_complexity	1	30	(0)	845019
228	29.6	10.2	0.0	chr12	48296012	48296126	(84979183)	+	MIR3	SINE/MIR	34	161	(47)	845020
290	30.4	1.1	9.9	chr12	48968412	48968595	(84306714)	+	MIR3	SINE/MIR	43	201	(7)	846184
17	4.9	0.0	0.0	chr12	48968781	48968801	(84306508)	+	(T)n	Simple_repeat	1	21	(0)	846185
18	20.5	1.9	1.9	chr12	49344968	49345021	(83930288)	+	(CCTCCCG)n	Simple_repeat	1	54	(0)	847001
182	24.4	2.2	0.0	chr12	49345534	49345578	(83929731)	+	L2c	LINE/L2	3334	3379	(8)	847002
264	37.2	12.0	3.4	chr12	49568586	49569002	(83706307)	+	L3	LINE/CR1	3481	3938	(161)	847433
380	26.4	12.9	7.1	chr12	49569186	49569229	(83706080)	+	L1ME4a	LINE/L1	5837	5879	(245)	847434
2001	10.2	0.0	3.6	chr12	49569230	49569533	(83705776)	C	AluSx3	SINE/Alu	(18)	293	1	847435
1602	17.1	4.9	1.0	chr12	50384155	50384446	(82890863)	+	AluJr4	SINE/Alu	1	304	(8)	849087
2996	14.8	1.3	3.0	chr12	50384447	50384808	(82890501)	+	L1MA8	LINE/L1	4639	5002	(1141)	849078
2272	10.5	0.3	0.0	chr12	50384809	50385104	(82890205)	C	AluSx1	SINE/Alu	(15)	297	1	849088
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
791	28.7	5.0	0.6	chr12	52175072	52175397	(81099912)	C	L1MC5	LINE/L1	(300)	9004	8664	852568
4549	8.7	3.8	0.0	chr12	52238879	52239465	(81035844)	C	LTR71B	LTR/ERV1	(0)	610	1	852677
335	31.7	6.2	3.7	chr12	52909562	52909748	(80365561)	+	L3	LINE/CR1	3904	4095	(4)	853637
473	30.9	9.3	1.3	chr12	52957177	52957402	(80317907)	C	MIRc	SINE/MIR	(7)	261	16	853753
652	17.1	3.8	3.8	chr12	52957425	52957582	(80317727)	C	MER5B	DNA/hAT-Charlie	(17)	161	4	853754
2353	9.6	0.0	0.7	chr12	53329731	53330033	(79945276)	C	AluSq2	SINE/Alu	(12)	301	1	854492
399	24.6	15.2	4.6	chr12	53427041	53427257	(79848052)	C	L2a	LINE/L2	(0)	3426	3183	854735
2073	10.8	1.4	0.4	chr12	53427394	53427702	(79847607)	C	AluSz	SINE/Alu	(0)	312	1	854736
13	9.9	2.6	7.7	chr12	53791855	53791892	(79483417)	+	(AAT)n	Simple_repeat	1	39	(0)	855467
367	33.8	10.6	5.3	chr12	54596858	54597141	(78678168)	C	L2c	LINE/L2	(12)	3375	3075	856707
1588	17.8	1.7	1.1	chr12	55765357	55765643	(77509666)	C	AluJr4	SINE/Alu	(23)	289	1	858191
1785	15.8	14.4	0.0	chr12	56839492	56839870	(76435439)	+	LTR65	LTR/ERV1	219	661	(8)	860352
12	18.4	5.4	0.0	chr12	57111422	57111458	(76163851)	+	GA-rich	Low_complexity	1	39	(0)	860715
252	25.5	10.4	6.8	chr12	57229178	57229349	(76045960)	C	MIRc	SINE/MIR	(53)	215	9	860884
13	5.2	0.0	0.0	chr12	57751575	57751594	(75523715)	+	(CCT)n	Simple_repeat	1	20	(0)	861783
323	18.5	0.0	1.5	chr12	57757245	57757310	(75517999)	C	L2a	LINE/L2	(1)	3425	3361	861788
2100	22.4	4.9	2.7	chr12	62724666	62725260	(70550049)	C	Kanga1b	DNA/TcMar-Tc2	(3)	776	168	868388
1499	19.6	8.5	5.4	chr12	62725261	62725735	(70549574)	+	MER39	LTR/ERV1	1	707	(0)	868389
278	17.5	0.0	0.0	chr12	62941946	62942002	(70333307)	C	MER34	LTR/ERV1	(65)	477	421	868728
1507	22.2	6.5	6.1	chr12	63420255	63420769	(69854540)	C	LTR55	LTR/ERVL?	(5)	543	25	869383
16	22.7	3.7	1.8	chr12	64781090	64781098	(68494211)	+	(GGC)n	Simple_repeat	1	53	(0)	871797
18	13.8	2.4	2.3	chr12	64781099	64781140	(68494169)	+	(GGCCGCG)n	Simple_repeat	1	43	(0)	871798
269	35.0	1.6	7.2	chr12	65389184	65389377	(67885932)	+	L2	LINE/L2	318	500	(2919)	872730
222	34.1	15.1	0.0	chr12	65389456	65389590	(67885719)	+	L2	LINE/L2	663	821	(2598)	872730
441	33.6	4.0	2.2	chr12	65602915	65603138	(67672171)	+	L2a	LINE/L2	3146	3414	(12)	873029
268	25.0	5.2	4.2	chr12	66367422	66367517	(66907792)	+	MER5A	DNA/hAT-Charlie	56	152	(37)	874294
16044	13.7	1.4	1.9	chr12	66408509	66409968	(66865341)	+	L1MA2	LINE/L1	945	2396	(5169)	874363
2794	20.4	5.7	1.9	chr12	67263415	67263723	(66011586)	+	LTR38C	LTR/ERV1	45	370	(341)	875641
1896	16.4	0.0	2.3	chr12	67263724	67264028	(66011281)	+	AluJb	SINE/Alu	1	298	(14)	875642
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
301	30.8	5.1	6.5	chr12	70367573	70367711	(62907598)	+	Charlie4z	DNA/hAT-Charlie	2	138	(29)	880784
242	20.9	0.0	6.9	chr12	75511955	75512026	(57763283)	C	L2c	LINE/L2	(0)	3387	3321	887648
451	27.6	18.5	2.4	chr12	75704644	75704855	(57570454)	C	MIR	SINE/MIR	(0)	268	13	887951
228	25.2	8.9	6.8	chr12	75705233	75705364	(57569945)	C	Eulor8	DNA/TcMar?	(97)	465	331	887952
3306	9.8	2.4	0.0	chr12	76804452	76804899	(56470410)	+	LTR71A	LTR/ERV1	1	459	(0)	889894
5017	22.4	3.1	3.9	chr12	76895648	76896992	(56378317)	+	L1M1	LINE/L1	181	2201	(5364)	890034
1984	14.6	0.7	1.0	chr12	76896993	76897294	(56378015)	+	AluSz6	SINE/Alu	2	302	(10)	890036
1972	12.3	3.3	0.6	chr12	77153034	77153361	(56121948)	+	L1MA4A	LINE/L1	5963	6299	(4)	890457
21866	13.3	3.3	2.5	chr12	77447347	77452420	(55822889)	+	L1MA3	LINE/L1	15	5107	(2458)	890857
2087	17.2	4.6	5.5	chr12	78025624	78025995	(55249314)	+	MSTB1	LTR/ERVL-MaLR	51	432	(0)	891620
1296	28.8	4.9	5.4	chr12	78025996	78026481	(55248828)	+	L2	LINE/L2	2118	2601	(818)	891617
1608	19.7	0.3	3.0	chr12	78027155	78027453	(55247856)	+	AluJr	SINE/Alu	2	292	(20)	891623
15896	13.6	3.7	1.3	chr12	78027491	78027942	(55247367)	+	Tigger4	DNA/TcMar-Tigger	1	466	(2265)	891624
1721	22.5	5.4	4.2	chr12	78515599	78516095	(54759214)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	892239
325	36.8	9.1	5.2	chr12	80186153	80186648	(53088661)	+	L2	LINE/L2	2445	2961	(458)	894661
22	33.4	0.0	0.0	chr12	84912766	84912840	(48362469)	+	(GT)n	Simple_repeat	1	75	(0)	900920
1164	19.1	2.8	0.0	chr12	89255998	89256206	(44019103)	C	MER20	DNA/hAT-Charlie	(4)	215	1	906705
949	27.7	2.5	0.9	chr12	89256235	89256467	(44018842)	+	MIRb	SINE/MIR	32	268	(0)	906706
21	16.8	6.5	1.5	chr12	92145536	92145597	(41129712)	+	(GGC)n	Simple_repeat	1	66	(0)	911015
984	27.3	14.8	2.9	chr12	92759847	92760295	(40515014)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	1	912080
210	30.6	3.6	3.6	chr12	93323842	93323953	(39951356)	+	L2c	LINE/L2	2542	2653	(766)	913192
590	17.4	3.9	0.0	chr12	93429411	93429508	(39845801)	+	Tigger3b	DNA/TcMar-Tigger	1	102	(1129)	913406
5409	11.0	8.0	1.2	chr12	93429507	93430398	(39844911)	+	Tigger3b	DNA/TcMar-Tigger	274	1231	(0)	913407
1405	20.4	7.5	0.3	chr12	93557640	93557983	(39717326)	C	L1ME1	LINE/L1	(2073)	4073	3703	913717
25004	7.2	0.4	0.9	chr12	93557969	93559385	(39715924)	+	L1PA10	LINE/L1	2110	3499	(2647)	913719
415	27.9	11.4	1.3	chr12	93996489	93996637	(39278672)	C	MARNA	DNA/TcMar-Mariner	(139)	447	282	914477
348	21.7	1.2	1.2	chr12	94710987	94711070	(38564239)	+	MLT1K	LTR/ERVL-MaLR	358	441	(154)	915686
347	22.8	2.3	15.3	chr12	94711187	94711336	(38563973)	+	MLT1K	LTR/ERVL-MaLR	459	588	(7)	915686
420	24.9	0.0	3.6	chr12	94903701	94903800	(38371509)	C	MER5B	DNA/hAT-Charlie	(27)	162	58	916060
3970	5.9	0.4	1.7	chr12	94903801	94904316	(38370993)	C	L1PA5	LINE/L1	(4)	6150	5642	916061
328	24.9	7.2	0.3	chr12	95214095	95214199	(38061110)	+	L2a	LINE/L2	3253	3384	(42)	916758
1945	17.4	0.3	0.0	chr12	95414964	95415274	(37860035)	+	AluJr4	SINE/Alu	1	312	(0)	917183
479	36.0	3.8	0.0	chr12	95415283	95415510	(37859799)	+	MIRb	SINE/MIR	32	268	(0)	917184
253	28.3	6.4	15.2	chr12	96906710	96907005	(36368304)	+	L2b	LINE/L2	3139	3396	(30)	919870
1177	16.1	0.0	0.0	chr12	101844112	101844291	(31431018)	+	AluSx1	SINE/Alu	133	312	(0)	928072
303	23.5	12.9	1.2	chr12	101844461	101844542	(31430767)	C	LTR33	LTR/ERVL	(348)	167	75	928073
2190	10.9	0.7	0.3	chr12	101844629	101844922	(31430387)	C	AluSz	SINE/Alu	(17)	295	1	928074
616	22.2	4.7	2.4	chr12	103548416	103548623	(29726686)	+	Charlie7	DNA/hAT-Charlie	490	702	(1910)	930838
237	22.5	3.6	0.0	chr12	103548629	103548708	(29726601)	+	Charlie7	DNA/hAT-Charlie	2425	2507	(105)	930839
1096	17.6	5.1	3.8	chr12	103833977	103834189	(29441120)	C	MER20	DNA/hAT-Charlie	(3)	216	1	931378
1578	15.2	9.1	1.6	chr12	103834353	103834712	(29440597)	+	L1MC3	LINE/L1	7395	7785	(0)	931379
620	31.4	13.2	4.1	chr12	103955936	103956522	(29318787)	C	L2a	LINE/L2	(2)	3424	2769	931597
454	13.4	0.0	0.0	chr12	103956534	103956600	(29318709)	C	MSTA1	LTR/ERVL-MaLR	(13)	452	386	931598
2583	15.3	2.4	0.4	chr12	104281997	104282448	(28992861)	C	MER65C	LTR/ERV1	(0)	461	1	932267
1131	32.1	3.4	4.0	chr12	104282449	104282570	(28992739)	+	L2a	LINE/L2	3045	3168	(258)	932262
1690	17.2	14.3	1.1	chr12	105761979	105762330	(27512979)	+	MLT1A1	LTR/ERVL-MaLR	1	406	(2)	934974
3208	16.5	2.8	4.0	chr12	105762331	105762814	(27512495)	C	L1MB7	LINE/L1	(170)	6014	5535	934973
12047	10.8	4.9	3.2	chr12	106259114	106259517	(27015792)	+	L1MA2	LINE/L1	1660	2074	(5491)	935921
2361	8.4	1.0	0.0	chr12	106259518	106259815	(27015494)	C	AluSp	SINE/Alu	(12)	301	1	935922
277	30.2	13.3	3.1	chr12	106282234	106282428	(26992881)	C	L1ME3G	LINE/L1	(298)	699	482	935962
252	28.4	2.4	4.7	chr12	106282510	106282594	(26992715)	+	Tigger16a	DNA/TcMar-Tigger	89	171	(786)	935963
278	35.0	8.0	1.9	chr12	106282629	106282927	(26992382)	+	L2b	LINE/L2	2741	3066	(353)	935964
333	14.6	1.8	0.0	chr12	106282934	106282988	(26992321)	C	U7	snRNA	(6)	57	2	935965
376	37.3	0.0	10.4	chr12	106282991	106283325	(26991984)	+	L2b	LINE/L2	3043	3342	(33)	935964
254	16.7	1.6	10.4	chr12	107336686	107336752	(25938557)	+	L2c	LINE/L2	3321	3381	(6)	937904
470	22.6	2.8	1.9	chr12	107336758	107336865	(25938444)	+	L2a	LINE/L2	3304	3412	(14)	937905
194	36.5	0.0	0.0	chr12	107337205	107337267	(25938042)	C	MIRc	SINE/MIR	(123)	145	83	937906
578	25.5	1.2	11.6	chr12	107515841	107516124	(25759185)	+	MER112	DNA/hAT-Charlie	1	254	(7)	938329
23675	8.3	0.6	0.5	chr12	107861613	107864193	(25411116)	+	L1PA7	LINE/L1	1960	4540	(1779)	938982
7050	8.4	14.1	10.3	chr12	107864194	107865394	(25409915)	+	LTR12D	LTR/ERV1	1	1254	(0)	938983
2665	0.7	0.0	0.0	chr12	107904295	107904600	(25370709)	C	AluYa5	SINE/Alu	(0)	311	2	939044
4579	21.8	8.2	6.1	chr12	108671341	108671755	(24603554)	+	HAL1M8	LINE/L1	1117	1546	(1445)	940770
1865	15.4	0.7	1.6	chr12	108671756	108672061	(24603248)	C	AluJb	SINE/Alu	(9)	303	1	940772
4579	21.8	8.2	6.1	chr12	108672063	108672599	(24602710)	+	HAL1M8	LINE/L1	1547	2074	(917)	940770
11	24.4	4.0	1.9	chr12	110502042	110502091	(22773218)	+	(CCGTCA)n	Simple_repeat	1	52	(0)	944882
19	12.8	0.0	0.0	chr12	110661302	110661335	(22613974)	+	(CTC)n	Simple_repeat	1	34	(0)	945230
220	29.4	19.1	4.3	chr12	111160550	111161058	(22114251)	C	L2	LINE/L2	(469)	2950	2349	946417
1142	10.1	0.0	0.0	chr12	111243497	111243670	(22031639)	C	AluJr	SINE/Alu	(0)	312	134	946599
407	23.0	1.1	1.1	chr12	111243686	111243773	(22031536)	C	MER81	DNA/hAT-Blackjack	(0)	114	27	946600
323	17.6	0.0	0.0	chr12	111243783	111243833	(22031476)	C	MER81	DNA/hAT-Blackjack	(58)	56	6	946601
396	28.6	0.0	0.0	chr12	111243964	111244054	(22031255)	+	MLT1O	LTR/ERVL-MaLR	111	201	(341)	946602
483	12.2	13.5	0.0	chr12	111244103	111244192	(22031117)	C	AluJo	SINE/Alu	(179)	133	30	946603
230	27.4	0.0	0.0	chr12	111685385	111685435	(21589874)	C	L2b	LINE/L2	(87)	3288	3238	947657
14	29.0	0.0	1.8	chr12	113185723	113185778	(20089531)	+	(TGCTGGT)n	Simple_repeat	1	56	(0)	950999
315	28.5	6.8	0.8	chr12	114475939	114476062	(18799247)	C	MIRb	SINE/MIR	(99)	169	38	953788
395	20.2	6.9	0.0	chr12	114476220	114476313	(18798996)	C	MER91B	DNA/hAT-Tip100	(0)	190	90	953789
528	19.6	0.0	0.0	chr12	114476322	114476372	(18798937)	C	MER91B	DNA/hAT-Tip100	(60)	130	89	953789
1672	20.7	3.2	0.3	chr12	114476373	114476706	(18798603)	+	MER2	DNA/TcMar-Tigger	1	344	(1)	953790
287	29.6	0.0	6.9	chr12	115379359	115379474	(17895835)	C	L2c	LINE/L2	(34)	3353	3246	955888
382	25.2	1.0	2.8	chr12	115379737	115379842	(17895467)	C	MIRb	SINE/MIR	(132)	136	33	955889
2381	9.7	0.7	0.0	chr12	116273024	116273332	(17001977)	+	AluSp	SINE/Alu	2	312	(1)	957617
868	26.8	8.6	2.2	chr12	116391122	116391438	(16883871)	+	MLT1J2	LTR/ERVL-MaLR	110	448	(0)	957916
672	16.3	0.0	0.0	chr12	116391449	116391546	(16883763)	C	FRAM	SINE/Alu	(60)	116	19	957917
333	23.1	4.1	2.2	chr12	116391619	116391721	(16883588)	+	L2b	LINE/L2	3275	3387	(0)	957918
665	21.2	11.9	1.0	chr12	116713035	116713229	(16562080)	C	MER20	DNA/hAT-Charlie	(0)	219	1	958759
277	25.1	15.3	2.8	chr12	116713327	116713576	(16561733)	+	L1ME3G	LINE/L1	15	301	(623)	958760
535	25.9	5.8	6.4	chr12	117228148	117228358	(16046951)	C	MIR	SINE/MIR	(2)	228	9	959851
950	21.2	5.5	0.5	chr12	117594765	117594972	(15680337)	+	MER20	DNA/hAT-Charlie	1	219	(0)	960684
19	3.9	0.0	0.0	chr12	117595240	117595266	(15680043)	+	(TTTA)n	Simple_repeat	1	27	(0)	960685
2010	13.7	1.0	1.0	chr12	117824899	117825197	(15450112)	+	AluSz	SINE/Alu	2	300	(12)	961145
17	43.1	0.8	0.0	chr12	117825275	117825401	(15449908)	+	G-rich	Low_complexity	1	128	(0)	961146
527	32.1	13.2	1.1	chr12	117825417	117825804	(15449505)	+	L2a	LINE/L2	2976	3426	(0)	961147
12	5.5	0.0	0.0	chr12	118372676	118372694	(14902615)	+	(CCG)n	Simple_repeat	1	19	(0)	962447
2175	15.5	0.5	8.1	chr12	118467298	118467478	(14807831)	C	MLT1B	LTR/ERVL-MaLR	(210)	180	1	962626
1019	26.6	5.5	10.1	chr12	118467479	118467901	(14807408)	+	MLT1H	LTR/ERVL-MaLR	44	443	(106)	962625
560	31.8	8.8	4.6	chr12	119813687	119814184	(13461125)	+	L4_A_Mam	LINE/RTE-X	4459	4979	(11)	965539
374	14.9	5.6	0.0	chr12	120466419	120466485	(12808824)	+	FLAM_A	SINE/Alu	62	132	(10)	967145
1912	15.8	1.0	0.0	chr12	120466543	120466834	(12808475)	C	AluJo	SINE/Alu	(17)	295	1	967146
748	26.2	2.3	6.2	chr12	120647210	120647386	(12627923)	C	MIRb	SINE/MIR	(24)	244	73	967589
825	8.7	6.8	2.4	chr12	120647387	120647513	(12627796)	C	FLAM_C	SINE/Alu	(10)	133	1	967590
748	26.2	2.3	6.2	chr12	120647514	120647559	(12627750)	C	MIRb	SINE/MIR	(196)	72	30	967589
1915	10.5	0.0	4.7	chr12	120647561	120647881	(12627428)	C	AluSx1	SINE/Alu	(0)	312	1	967591
14	15.3	13.8	0.0	chr12	120654648	120654712	(12620597)	+	(GCAGAGT)n	Simple_repeat	1	74	(0)	967607
244	27.3	13.2	0.0	chr12	120655016	120655081	(12620228)	+	MER102b	DNA/hAT-Charlie	3	78	(263)	967608
1941	9.1	0.4	2.2	chr12	120655146	120655420	(12619889)	+	AluSx1	SINE/Alu	1	270	(42)	967609
194	34.6	11.3	0.8	chr12	120666506	120666773	(12608536)	C	L2b	LINE/L2	(383)	3036	2737	967626
209	32.1	5.5	0.7	chr12	121015985	121016122	(12259187)	C	L2	LINE/L2	(639)	2780	2636	968379
187	24.2	13.9	8.3	chr12	121016033	121016140	(12259169)	+	Tigger19b	DNA/TcMar-Tigger	235	349	(201)	968380
296	23.5	13.4	0.0	chr12	121016663	121016787	(12258522)	C	MIR3	SINE/MIR	(23)	185	40	968381
2451	5.3	0.0	1.0	chr12	122054084	122054386	(11220923)	C	AluYm1	SINE/Alu	(11)	300	1	971004
18	18.8	6.5	1.5	chr12	122500541	122500611	(10774698)	+	(CGCCCT)n	Simple_repeat	1	74	(0)	972003
14	12.5	0.0	0.0	chr12	122500719	122500744	(10774565)	+	(TCG)n	Simple_repeat	1	26	(0)	972004
310	31.1	8.0	1.0	chr12	122951775	122951878	(10323431)	C	MIRc	SINE/MIR	(136)	132	21	973022
1294	19.7	4.4	2.5	chr12	122951892	122952239	(10323070)	+	MLT1A1	LTR/ERVL-MaLR	3	402	(6)	973023
235	24.1	1.7	0.0	chr12	122952356	122952413	(10322896)	+	L2b	LINE/L2	3312	3370	(5)	973024
829	10.4	0.0	7.5	chr12	123233964	123234097	(10041212)	C	FLAM_C	SINE/Alu	(15)	128	5	973592
2252	7.3	1.0	0.0	chr12	123458593	123458893	(9816416)	C	AluSc8	SINE/Alu	(7)	304	1	974153
2464	22.0	1.4	2.0	chr12	123915342	123915902	(9359407)	C	L1MB7	LINE/L1	(5)	6179	5622	975179
16	12.7	0.0	5.3	chr12	124466458	124466496	(8808813)	+	(GCTCCA)n	Simple_repeat	1	36	(0)	976104
370	37.2	2.0	0.0	chr12	124466499	124466643	(8808666)	+	MIR	SINE/MIR	48	195	(67)	976105
491	32.0	5.6	7.5	chr12	124853012	124853279	(8422030)	C	L2a	LINE/L2	(201)	3225	2969	976977
2537	8.4	0.0	0.0	chr12	124853386	124853694	(8421615)	C	AluSx	SINE/Alu	(3)	309	1	976979
259	26.0	7.0	6.4	chr12	131193974	131194129	(2081180)	C	L2b	LINE/L2	(211)	3164	3008	987835
239	18.5	2.4	17.4	chr12	131194240	131194337	(2080972)	+	MLT1N2	LTR/ERVL-MaLR	93	175	(387)	987836
237	33.5	9.8	3.0	chr12	132083857	132084056	(1191253)	+	L2b	LINE/L2	3109	3323	(52)	989054
238	33.3	0.8	0.8	chr12	132380324	132380450	(894859)	C	L1MC5a	LINE/L1	(785)	1992	1866	989396
1659	19.2	10.7	5.2	chr12	132617669	132618134	(657175)	+	L1MB5	LINE/L1	5672	6166	(8)	989680
22	16.3	0.0	0.0	chr12	132618225	132618260	(657049)	+	A-rich	Low_complexity	1	36	(0)	989681
418	15.6	3.8	2.5	chr12	132648553	132648631	(626678)	+	L1MB7	LINE/L1	6098	6177	(1)	989716
213	36.2	1.2	0.0	chr12	132648755	132648834	(626475)	C	MIRb	SINE/MIR	(24)	244	164	989718
16	11.7	0.0	0.0	chr13	19958702	19958735	(94405593)	+	(CCT)n	Simple_repeat	1	34	(0)	993492
1667	14.2	4.7	3.4	chr13	20127270	20127565	(94236763)	C	AluJr	SINE/Alu	(0)	312	13	993807
16	15.3	2.0	6.0	chr13	20127770	20127818	(94236510)	+	(TGAGG)n	Simple_repeat	1	50	(0)	993808
445	35.0	5.7	0.5	chr13	21657370	21657584	(92706744)	+	L2a	LINE/L2	2850	3076	(343)	996481
482	16.7	0.0	1.1	chr13	21657595	21657685	(92706643)	C	MER44B	DNA/TcMar-Tigger	(6)	544	455	996482
1423	18.4	0.4	0.8	chr13	21657685	21657947	(92706381)	C	MER44B	DNA/TcMar-Tigger	(288)	262	1	996482
4951	14.8	2.6	6.7	chr13	23507873	23508191	(90856137)	+	Tigger3b	DNA/TcMar-Tigger	216	538	(693)	998954
2273	7.0	1.4	0.3	chr13	23508192	23508476	(90855852)	C	AluY	SINE/Alu	(6)	305	18	998958
3633	13.2	5.4	0.1	chr13	26697968	26698553	(87665775)	+	MER39B	LTR/ERV1	1	608	(45)	1003645
3306	25.5	6.0	2.7	chr13	26719837	26721207	(87643121)	+	L1MEg	LINE/L1	1901	3416	(2730)	1003691
2347	11.8	4.7	0.3	chr13	26791691	26792038	(87572290)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1003804
16	18.9	0.0	0.0	chr13	26975581	26975610	(87388718)	+	(AC)n	Simple_repeat	1	30	(0)	1004096
6108	8.8	2.5	1.8	chr13	27125487	27126431	(87237897)	+	L1P2	LINE/L1	5	956	(5228)	1004359
16	16.6	0.0	0.0	chr13	27821455	27821481	(86542847)	+	A-rich	Low_complexity	1	27	(0)	1005576
1037	15.2	2.2	0.0	chr13	28486903	28487079	(85877249)	+	MER5A	DNA/hAT-Charlie	1	181	(8)	1006823
814	21.9	1.8	0.0	chr13	28487079	28487247	(85877081)	C	MER5B	DNA/hAT-Charlie	(4)	174	3	1006824
1306	14.3	4.4	0.0	chr13	30132399	30132635	(84231693)	C	L1MA8	LINE/L1	(1)	6290	6043	1009175
16	14.2	0.0	0.0	chr13	30765036	30765066	(83599262)	+	(AATG)n	Simple_repeat	1	31	(0)	1010342
611	16.1	0.0	0.0	chr13	30765149	30765241	(83599087)	C	MLT1A0	LTR/ERVL-MaLR	(272)	93	1	1010343
1314	21.3	15.9	17.8	chr13	30858363	30858934	(83505394)	C	MLT1F2	LTR/ERVL-MaLR	(1)	559	1	1010501
195	33.8	0.0	4.4	chr13	31086666	31086733	(83277595)	C	UCON132b	DNA/hAT-Tip100	(6)	142	78	1010853
11	14.1	0.0	8.1	chr13	31896290	31896326	(82468002)	+	(ATTTAC)n	Simple_repeat	1	37	(0)	1011981
369	32.1	11.9	4.5	chr13	32851520	32851829	(81512499)	C	L2c	LINE/L2	(1)	3386	3051	1013440
828	27.3	7.8	1.2	chr13	33818362	33818761	(80545567)	C	L2a	LINE/L2	(176)	3250	2806	1014882
229	31.8	18.7	3.9	chr13	35462538	35463182	(78901146)	C	L2	LINE/L2	(509)	2910	2148	1017156
4673	16.7	2.3	1.7	chr13	36474435	36475498	(77888830)	C	L1MA4	LINE/L1	(2696)	4866	3796	1018582
1171	25.0	1.6	0.9	chr13	36475516	36475830	(77888498)	+	L1M1	LINE/L1	1782	2098	(5467)	1018584
1955	25.5	3.6	1.8	chr13	36475977	36476419	(77887909)	C	L1MA4	LINE/L1	(6987)	578	129	1018582
1762	18.8	7.0	10.5	chr13	36840545	36841067	(77523261)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	1019147
20	6.9	3.0	2.9	chr13	38003711	38003743	(76360585)	+	(TC)n	Simple_repeat	1	34	(0)	1020723
2356	14.9	2.1	6.6	chr13	39901674	39902161	(74462167)	C	MER31B	LTR/ERV1	(0)	466	1	1023295
309	30.1	0.7	5.0	chr13	40565193	40565332	(73798996)	C	L2c	LINE/L2	(4)	3383	3250	1024318
310	25.0	10.4	9.6	chr13	40565420	40565678	(73798650)	+	L2a	LINE/L2	3115	3422	(4)	1024319
238	25.6	2.5	3.7	chr13	40565664	40565744	(73798584)	+	MIRb	SINE/MIR	138	217	(51)	1024320
2179	13.7	0.0	1.7	chr13	40591714	40592006	(73772322)	C	AluSz6	SINE/Alu	(24)	288	1	1024352
2429	13.4	2.9	2.3	chr13	40742841	40743029	(73621299)	+	L1PA15	LINE/L1	4928	5109	(1037)	1024635
713	29.8	17.6	3.7	chr13	40915281	40915688	(73448640)	C	L2	LINE/L2	(398)	3021	2545	1024894
185	28.0	13.7	1.8	chr13	40970420	40970528	(73393800)	+	MIRc	SINE/MIR	141	264	(4)	1025015
714	14.5	3.0	9.7	chr13	42752446	42752590	(71611738)	+	AluJb	SINE/Alu	1	135	(177)	1027830
499	30.1	10.1	0.5	chr13	42752678	42752891	(71611437)	C	MIR	SINE/MIR	(0)	262	26	1027831
653	29.1	7.8	0.0	chr13	42752889	42753101	(71611227)	+	MIR	SINE/MIR	5	235	(27)	1027832
2262	10.7	0.3	2.7	chr13	43018669	43018804	(71345524)	C	AluSq2	SINE/Alu	(175)	138	4	1028266
341	24.6	5.3	8.0	chr13	43018805	43018837	(71345491)	C	Tigger13a	DNA/TcMar-Tigger	(97)	674	639	1028265
394	19.0	1.6	9.0	chr13	43018846	43018978	(71345350)	C	MER106B	DNA/hAT-Charlie	(3)	1056	934	1028268
763	26.9	12.5	0.0	chr13	43018990	43019268	(71345060)	C	Tigger13a	DNA/TcMar-Tigger	(161)	610	292	1028265
16	29.2	1.7	0.0	chr13	43146639	43146696	(71217632)	+	(GAT)n	Simple_repeat	1	59	(0)	1028480
184	35.5	12.7	2.6	chr13	43763050	43763162	(70601166)	C	MIR3	SINE/MIR	(25)	183	58	1029300
1311	19.2	10.8	0.9	chr13	43763169	43763491	(70600837)	C	MLT1A0	LTR/ERVL-MaLR	(10)	355	1	1029301
183	19.5	0.0	2.4	chr13	44535048	44535089	(69829239)	+	Tigger19a	DNA/TcMar-Tigger	219	259	(64)	1030454
2773	24.8	7.6	9.9	chr13	49420998	49422092	(64942236)	+	L1MDa	LINE/L1	89	1155	(5478)	1038363
22	0.0	0.0	0.0	chr13	50091772	50091795	(64272533)	+	(GA)n	Simple_repeat	1	24	(0)	1039613
51	0.0	0.0	0.0	chr13	50091796	50091839	(64272489)	+	(GT)n	Simple_repeat	1	44	(0)	1039614
595	33.8	14.1	3.5	chr13	50091853	50092390	(64271938)	C	L2	LINE/L2	(906)	2513	1916	1039615
19	0.0	0.0	0.0	chr13	50283823	50283843	(64080485)	+	(A)n	Simple_repeat	1	21	(0)	1039898
3516	13.8	0.9	0.2	chr13	50318915	50319438	(64044890)	+	MER1A	DNA/hAT-Charlie	2	529	(0)	1039946
237	25.3	41.4	2.4	chr13	50466015	50466142	(63898186)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	1040179
12	30.4	1.7	1.7	chr13	50909720	50909777	(63454551)	+	(GCGCC)n	Simple_repeat	1	59	(0)	1040827
254	19.5	15.5	1.1	chr13	51305187	51305274	(63059054)	+	Tigger8	DNA/TcMar-Tigger	178	280	(387)	1041366
864	18.8	5.8	1.8	chr13	51849938	51850102	(62514226)	+	AluJr	SINE/Alu	5	176	(136)	1042198
5546	11.4	0.4	0.0	chr13	54727795	54728574	(59635754)	+	THE1B-int	LTR/ERVL-MaLR	797	1579	(1)	1046263
2174	16.5	0.3	0.6	chr13	54728576	54728940	(59635388)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1046263
1559	27.2	3.8	2.2	chr13	57348006	57348291	(57016037)	+	L1ME3A	LINE/L1	5753	6039	(134)	1049443
3015	16.7	3.7	0.7	chr13	57348292	57348865	(57015463)	+	LTR49	LTR/ERV1	1	592	(3)	1049451
20706	15.3	3.0	0.5	chr13	58176967	58181932	(56182396)	C	L1M1	LINE/L1	(2467)	5098	16	1050434
5884	12.8	13.2	0.6	chr13	58949241	58950315	(55414013)	+	MER11B	LTR/ERVK	1	1232	(4)	1051400
342	28.9	0.7	9.2	chr13	59531409	59531572	(54832756)	+	MER5B	DNA/hAT-Charlie	29	178	(0)	1052239
200	32.8	1.5	10.1	chr13	59531598	59531746	(54832582)	C	L2b	LINE/L2	(222)	3153	3018	1052235
434	27.8	14.2	2.1	chr13	60627287	60627477	(53736851)	+	MIRb	SINE/MIR	5	222	(46)	1053790
291	29.9	10.9	4.1	chr13	61813414	61813608	(52550720)	+	HAL1	LINE/L1	447	656	(1851)	1055233
1314	32.7	7.3	5.2	chr13	61813645	61815262	(52549066)	+	HAL1	LINE/L1	736	2389	(118)	1055233
4122	15.4	1.1	2.0	chr13	61815692	61815952	(52548376)	+	L1MA7	LINE/L1	5538	5793	(498)	1055234
46	0.0	0.0	0.0	chr13	61815953	61815991	(52548337)	+	(AC)n	Simple_repeat	1	39	(0)	1055236
4122	15.4	1.1	2.0	chr13	61815992	61816490	(52547838)	+	L1MA7	LINE/L1	5794	6291	(0)	1055234
16	21.2	3.5	3.3	chr13	61880886	61880943	(52483385)	+	(ACATAT)n	Simple_repeat	1	60	(0)	1055311
1527	23.1	8.1	3.6	chr13	61880946	61881466	(52482862)	C	LTR55	LTR/ERVL?	(2)	546	1	1055312
7219	9.2	1.5	1.3	chr13	61924250	61924485	(52439843)	C	L1PA10	LINE/L1	(1622)	4524	4291	1055363
1000	19.1	3.6	11.8	chr13	61924551	61924822	(52439506)	C	AluJo	SINE/Alu	(54)	258	10	1055365
372	33.7	5.3	1.5	chr13	61924826	61925024	(52439304)	+	L2a	LINE/L2	3123	3329	(97)	1055360
17442	17.3	1.9	3.8	chr13	62508644	62513010	(51851318)	C	L1PA16	LINE/L1	(1686)	4797	551	1056092
998	29.2	5.7	1.6	chr13	62933471	62933905	(51430423)	+	HAL1	LINE/L1	1325	1778	(729)	1056624
453	23.1	8.8	2.5	chr13	62933920	62934079	(51430249)	+	LTR16A	LTR/ERVL	4	174	(277)	1056629
786	38.9	5.8	3.1	chr13	63446180	63446752	(50917576)	C	Charlie17b	DNA/hAT-Charlie	(566)	638	50	1057287
13422	13.8	6.0	0.9	chr13	63652632	63655885	(50708443)	C	L1PA10	LINE/L1	(1)	6167	2725	1057559
2921	10.6	0.0	0.2	chr13	63684648	63685062	(50679266)	+	L1P3	LINE/L1	3917	4330	(1816)	1057597
8668	23.6	5.0	4.2	chr13	63953923	63956106	(50408222)	C	L1M1	LINE/L1	(4630)	2935	12	1057930
23386	8.1	0.5	0.3	chr13	65585176	65591324	(48773004)	+	L1PA5	LINE/L1	5	6149	(5)	1059989
13080	18.1	7.1	1.0	chr13	65818089	65819895	(48544433)	+	L1M1	LINE/L1	106	2070	(5495)	1060252
2113	14.9	1.9	3.7	chr13	65819896	65820277	(48544051)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1060254
431	27.9	5.7	4.6	chr13	65882615	65882787	(48481541)	+	LTR50	LTR/ERVL	12	186	(609)	1060339
467	26.4	14.9	2.3	chr13	65882811	65883104	(48481224)	+	LTR50	LTR/ERVL	250	683	(112)	1060339
70	18.3	0.0	0.0	chr13	65883105	65883228	(48481100)	+	(TA)n	Simple_repeat	1	124	(0)	1060340
22979	13.4	2.3	2.0	chr13	66646627	66653686	(47710642)	+	L1MA3	LINE/L1	12	7085	(639)	1061294
2181	17.6	3.9	2.8	chr13	66775437	66775862	(47588466)	+	Tigger2a	DNA/TcMar-Tigger	4	434	(0)	1061442
2073	17.4	1.0	3.0	chr13	66927156	66927215	(47437113)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	332	1061628
2282	8.5	3.4	2.0	chr13	66927216	66927562	(47436766)	+	L1PA13	LINE/L1	5812	6163	(0)	1061629
2073	17.4	1.0	3.0	chr13	66927563	66927899	(47436429)	C	MLT1B	LTR/ERVL-MaLR	(59)	331	1	1061628
184	31.3	13.6	6.3	chr13	67008451	67008593	(47355735)	+	L2	LINE/L2	2324	2478	(941)	1061738
18	3.5	0.0	6.1	chr13	67009018	67009050	(47355278)	+	(TTTTAT)n	Simple_repeat	1	33	(0)	1061739
541	28.6	8.6	0.0	chr13	67009095	67009265	(47355063)	C	MER5A	DNA/hAT-Charlie	(0)	189	3	1061740
552	26.8	13.1	0.0	chr13	67009369	67009521	(47354807)	+	Arthur1A	DNA/hAT-Tip100	2	177	(0)	1061741
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
275	40.4	4.0	5.3	chr13	67986397	67986761	(46377567)	C	L2a	LINE/L2	(1)	3425	3018	1062958
282	34.4	7.1	6.2	chr13	67986958	67987279	(46377049)	C	L2a	LINE/L2	(500)	2919	2595	1062958
1817	19.7	6.0	3.7	chr13	68208823	68209276	(46155052)	+	MSTA1	LTR/ERVL-MaLR	1	465	(0)	1063242
8927	8.3	0.5	2.1	chr13	69396548	69398235	(44966093)	C	L1PA7	LINE/L1	(377)	5777	4119	1064733
1461	20.5	7.8	3.3	chr13	70019784	70020172	(44344156)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1065557
5118	10.6	1.6	0.0	chr13	70809167	70809891	(43554437)	+	THE1B-int	LTR/ERVL-MaLR	1	737	(843)	1066643
3516	14.3	1.1	1.9	chr13	70809892	70810455	(43553873)	C	LTR6A	LTR/ERV1	(0)	564	6	1066644
19497	15.6	2.0	1.1	chr13	71284518	71287770	(43076558)	C	L1M1	LINE/L1	(4273)	3292	7	1067256
1554	21.6	4.9	5.9	chr13	71422050	71422458	(42941870)	+	MLT1A1	LTR/ERVL-MaLR	4	408	(0)	1067425
777	26.4	5.5	2.5	chr13	71685178	71685422	(42678906)	+	MamTip2	DNA/hAT-Tip100	42	294	(11)	1067769
18	20.1	4.2	2.0	chr13	71865798	71865845	(42498483)	+	(CG)n	Simple_repeat	1	50	(0)	1068015
2385	26.3	7.8	5.6	chr13	71941470	71942304	(42422024)	+	MLT1G1-int	LTR/ERVL-MaLR	1	855	(634)	1068135
1660	17.9	0.4	1.1	chr13	71942308	71942580	(42421748)	+	AluJr	SINE/Alu	3	273	(39)	1068136
322	22.5	8.0	11.0	chr13	72726685	72726839	(41637489)	C	MIRb	SINE/MIR	(58)	210	61	1069241
13	15.8	4.3	4.2	chr13	73966370	73966415	(40397913)	+	A-rich	Low_complexity	1	48	(0)	1071318
238	32.8	4.0	4.0	chr13	73966457	73966580	(40397748)	+	L3b	LINE/CR1	5038	5161	(71)	1071319
263	34.6	5.0	6.1	chr13	74687664	74687826	(39676502)	+	MIR3	SINE/MIR	3	163	(45)	1072281
3869	14.3	0.3	3.4	chr13	75135473	75136094	(39228234)	C	LTR26	LTR/ERV1	(0)	603	1	1072883
11182	9.0	5.3	0.9	chr13	75268265	75269771	(39094557)	+	LTR12C	LTR/ERV1	2	1579	(0)	1073074
2133	14.2	0.6	2.8	chr13	75270129	75270445	(39093883)	C	AluSq2	SINE/Alu	(3)	310	1	1073075
230	19.4	3.1	11.4	chr13	75437801	75437870	(38926458)	C	MER135	DNA	(15)	213	150	1073325
373	33.0	13.1	7.8	chr13	75469119	75469488	(38894840)	C	L2	LINE/L2	(368)	3051	2646	1073387
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
327	23.2	13.3	5.4	chr13	75536174	75536347	(38827981)	C	L1M5	LINE/L1	(1741)	4405	4206	1073514
1510	16.9	6.0	2.5	chr13	75536365	75536776	(38827552)	+	MLT1D	LTR/ERVL-MaLR	1	459	(46)	1073516
18050	10.8	5.0	0.8	chr13	75611422	75612665	(38751663)	C	L1MA3	LINE/L1	(1)	7723	6435	1073651
1930	28.9	9.5	4.4	chr13	75958408	75959648	(38404680)	C	HAL1	LINE/L1	(723)	1784	475	1074111
1595	25.2	11.4	0.6	chr13	76448432	76448906	(37915422)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	16	1074755
34	6.7	2.1	0.0	chr13	76886255	76886302	(37478026)	+	(CGC)n	Simple_repeat	1	49	(0)	1075376
353	35.8	8.2	5.0	chr13	77408977	77409376	(36954952)	C	L2c	LINE/L2	(5)	3382	2969	1076175
2018	17.3	6.5	2.4	chr13	77409398	77409811	(36954517)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	1076176
297	28.8	1.0	4.1	chr13	77499843	77499932	(36864396)	+	MIR	SINE/MIR	3	93	(175)	1076302
14	16.9	0.0	2.9	chr13	77697539	77697573	(36666755)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	1076566
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
19741	14.2	6.5	1.2	chr13	78114228	78116857	(36247471)	C	L1MA3	LINE/L1	(4519)	3046	226	1077079
707	24.7	5.1	0.0	chr13	78267649	78267814	(36096514)	+	MER45A	DNA/hAT-Tip100	2	176	(2)	1077291
2273	10.8	0.0	0.0	chr13	78267907	78268201	(36096127)	+	AluSg	SINE/Alu	1	295	(15)	1077292
187	17.6	13.6	0.0	chr13	78282582	78282632	(36081696)	C	L2c	LINE/L2	(1)	3386	3328	1077311
563	29.5	7.1	12.3	chr13	78282615	78282989	(36081339)	C	L2a	LINE/L2	(54)	3372	3019	1077312
1287	12.5	6.1	0.0	chr13	78425301	78425484	(35938844)	+	AluSx	SINE/Alu	2	197	(115)	1077519
3606	9.2	5.4	0.2	chr13	78425495	78425985	(35938343)	C	LTR71B	LTR/ERV1	(92)	518	1	1077520
1835	14.2	0.0	0.4	chr13	78430223	78430490	(35933838)	C	HERVP71A-int	LTR/ERV1	(7315)	275	9	1077521
3990	8.6	6.6	0.5	chr13	78430498	78431070	(35933258)	C	LTR71B	LTR/ERV1	(0)	610	1	1077521
3789	20.8	2.9	1.4	chr13	78893520	78894277	(35470051)	C	L1MB7	LINE/L1	(13)	6171	5404	1078172
504	28.4	15.1	1.9	chr13	79171109	79171478	(35192850)	C	LTR33	LTR/ERVL	(63)	452	33	1078546
16	13.1	0.0	0.0	chr13	79171553	79171577	(35192751)	+	(A)n	Simple_repeat	1	25	(0)	1078547
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
2232	9.0	0.7	2.7	chr13	79635896	79636195	(34728133)	+	AluSg	SINE/Alu	1	294	(16)	1079225
1877	28.8	4.7	6.5	chr13	79636196	79636846	(34727482)	+	L1ME3D	LINE/L1	5491	6125	(117)	1079224
572	10.5	0.0	0.0	chr13	79846368	79846443	(34517885)	+	AluYj4	SINE/Alu	219	294	(17)	1079474
942	27.8	6.5	5.4	chr13	79907902	79908293	(34456035)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	12	1079560
228	36.7	7.5	1.9	chr13	79908349	79908612	(34455716)	C	L2b	LINE/L2	(402)	3017	2738	1079558
29	5.2	2.4	2.3	chr13	79992772	79992813	(34371515)	+	(TG)n	Simple_repeat	1	43	(0)	1079631
1761	20.8	3.4	1.5	chr13	79992815	79993214	(34371114)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1079632
854	32.3	10.7	3.8	chr13	80010122	80011095	(34353233)	+	L2b	LINE/L2	2322	3375	(0)	1079654
3774	14.3	2.6	4.2	chr13	80431989	80432458	(33931870)	C	MER50B	LTR/ERV1	(247)	450	1	1080338
1311	21.7	3.0	7.0	chr13	80432536	80432992	(33931336)	+	MER34C_	LTR/ERV1	157	571	(14)	1080332
3118	18.2	1.6	1.2	chr13	80491646	80492306	(33872022)	C	L1MA7	LINE/L1	(10)	6281	5618	1080407
2188	9.0	2.2	19.3	chr13	81062946	81063386	(33300942)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1081072
3907	6.6	1.2	0.2	chr13	81063419	81063920	(33300408)	+	MER9a3	LTR/ERVK	2	508	(4)	1081073
739	29.5	5.9	1.5	chr13	83887016	83887275	(30477053)	C	L1ME4a	LINE/L1	(213)	5911	5635	1084517
2105	18.4	4.5	0.2	chr13	83887276	83887683	(30476645)	C	MSTC	LTR/ERVL-MaLR	(2)	426	1	1084518
460	31.4	14.3	0.4	chr13	84224098	84224356	(30139972)	+	LTR16	LTR/ERVL	131	431	(7)	1084956
732	21.7	3.5	4.0	chr13	84850519	84850547	(29513781)	C	L1PA15	LINE/L1	(0)	6166	6138	1085770
7686	17.9	6.1	4.8	chr13	84868406	84869528	(29494800)	C	MER4-int	LTR/ERV1	(710)	5888	4755	1085794
2281	13.9	4.9	4.7	chr13	85372289	85372483	(28991845)	+	MSTB1	LTR/ERVL-MaLR	1	201	(231)	1086461
1591	13.0	1.6	6.5	chr13	85372484	85372744	(28991584)	+	AluSx1	SINE/Alu	1	248	(64)	1086462
2281	13.9	4.9	4.7	chr13	85372745	85372978	(28991350)	+	MSTB1	LTR/ERVL-MaLR	202	431	(1)	1086461
509	36.5	11.2	3.3	chr13	87777307	87777960	(26586368)	C	LTR81A	LTR/Gypsy	(168)	1182	306	1089457
188	29.5	11.2	0.0	chr13	87934557	87934651	(26429677)	C	MIR	SINE/MIR	(0)	262	156	1089684
672	22.3	11.9	0.6	chr13	87934653	87934966	(26429362)	C	MLT1A1	LTR/ERVL-MaLR	(0)	396	2	1089685
548	29.5	9.7	0.0	chr13	87973226	87973476	(26390852)	+	L2	LINE/L2	2008	2285	(1134)	1089738
992	33.1	8.3	2.8	chr13	87973505	87974315	(26390013)	+	L2a	LINE/L2	2090	2948	(471)	1089739
1581	22.7	4.3	1.1	chr13	89296531	89296909	(25067419)	+	MLT1A1	LTR/ERVL-MaLR	5	396	(12)	1091409
6068	25.6	7.0	2.9	chr13	89296923	89298578	(25065750)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1728	(7)	1091409
703	19.7	0.0	0.0	chr13	90682233	90682359	(23681969)	C	Tigger1	DNA/TcMar-Tigger	(1935)	483	357	1093232
21147	14.2	1.9	0.8	chr13	90946354	90949668	(23414660)	+	L1M1	LINE/L1	12	3364	(4201)	1093576
266	31.6	1.3	13.6	chr13	92313963	92314138	(22050190)	C	LTR103b_Mam	LTR/ERV1?	(31)	517	364	1095408
513	28.0	12.7	4.1	chr13	92827163	92827505	(21536823)	+	LTR81B	LTR/Gypsy	102	478	(915)	1096056
2743	25.9	5.3	5.4	chr13	93171354	93172572	(21191756)	C	L1MC4	LINE/L1	(128)	7914	6698	1096539
1225	24.1	6.4	5.2	chr13	93233868	93234391	(21129937)	+	LTR55	LTR/ERVL?	16	546	(2)	1096618
238	30.6	21.9	1.5	chr13	93234394	93234599	(21129729)	C	L2a	LINE/L2	(531)	2888	2629	1096616
6657	14.4	3.6	1.7	chr13	93715936	93717138	(20647190)	+	Tigger3b	DNA/TcMar-Tigger	1	1227	(4)	1097267
1787	20.8	5.6	0.5	chr13	93788064	93788450	(20575878)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1097350
2290	7.2	0.4	0.0	chr13	95299861	95300138	(19064190)	C	AluSg	SINE/Alu	(31)	279	1	1099753
15	12.8	5.9	0.0	chr13	95300927	95300960	(19063368)	+	(TCC)n	Simple_repeat	1	36	(0)	1099754
268	38.6	4.9	1.9	chr13	97109687	97109871	(17254457)	+	MIRc	SINE/MIR	16	199	(63)	1102530
1017	11.4	0.0	0.0	chr13	97411675	97411806	(16952522)	C	AluY	SINE/Alu	(179)	132	1	1102956
201	24.0	1.6	20.9	chr13	99847383	99847540	(14516788)	+	Tigger19b	DNA/TcMar-Tigger	149	275	(275)	1106941
2155	14.2	0.7	0.0	chr13	100602093	100602402	(13761926)	+	AluJb	SINE/Alu	1	312	(0)	1108211
213	30.2	9.3	3.1	chr13	100602439	100602568	(13761760)	+	L3	LINE/CR1	3259	3397	(702)	1108212
17	14.0	0.0	6.7	chr13	100675097	100675141	(13689187)	+	G-rich	Low_complexity	1	45	(0)	1108313
13	17.5	7.3	3.4	chr13	104571951	104572005	(9792323)	+	(TGTGTA)n	Simple_repeat	1	59	(0)	1113623
16	16.8	0.0	6.5	chr13	106533246	106533291	(7831037)	+	(CCGC)n	Simple_repeat	1	46	(0)	1116197
290	35.2	4.9	3.6	chr13	111357360	111357515	(3006813)	C	L2c	LINE/L2	(62)	3325	3187	1122430
38	0.0	0.0	0.0	chr13	111357560	111357594	(3006734)	+	(CTTCTC)n	Simple_repeat	1	35	(0)	1122431
294	21.6	0.0	6.8	chr13	111357601	111357674	(3006654)	C	FLAM_A	SINE/Alu	(22)	120	52	1122432
474	19.0	11.6	4.2	chr13	111357699	111357841	(3006487)	+	Arthur1A	DNA/hAT-Tip100	23	177	(0)	1122433
70	20.4	9.1	1.4	chr13	111357971	111358233	(3006095)	+	(TG)n	Simple_repeat	1	287	(0)	1122434
433	29.6	22.1	0.3	chr13	112474640	112474957	(1889371)	+	L2	LINE/L2	1967	2373	(1046)	1123535
794	27.2	5.8	5.8	chr13	112474969	112475311	(1889017)	C	L1MEc	LINE/L1	(6038)	362	20	1123536
2401	29.0	5.4	3.8	chr14	20074664	20076424	(86967294)	+	L1MA8	LINE/L1	1937	3441	(4124)	1127505
3068	15.4	2.4	1.7	chr14	20195745	20196324	(86847394)	C	MER34A1	LTR/ERV1	(0)	587	4	1127653
261	33.6	1.7	4.9	chr14	20332531	20332652	(86711066)	C	MIRb	SINE/MIR	(133)	135	18	1127860
41	23.3	6.2	0.0	chr14	20624562	20624690	(86419028)	+	GA-rich	Low_complexity	1	137	(0)	1128365
4555	11.9	6.5	6.0	chr14	20790315	20791109	(86252609)	+	LTR1A1	LTR/ERV1	1	799	(0)	1128606
317	32.6	8.9	0.0	chr14	20791128	20791271	(86252447)	C	MIRb	SINE/MIR	(87)	181	24	1128607
198	20.4	8.5	0.0	chr14	23286697	23286750	(83756968)	+	OldhAT1	DNA/hAT-Ac	1842	1900	(948)	1132626
538	18.3	0.0	0.0	chr14	23286858	23286939	(83756779)	+	FLAM_A	SINE/Alu	41	122	(20)	1132627
1957	24.8	1.2	0.0	chr14	23695610	23696012	(83347706)	+	HERV3-int	LTR/ERV1	2069	2476	(5950)	1133227
643	21.2	2.7	7.0	chr14	23695986	23696142	(83347576)	+	HERV3-int	LTR/ERV1	3678	3827	(4599)	1133227
8590	20.9	4.5	1.4	chr14	23696148	23697805	(83345913)	+	HERV3-int	LTR/ERV1	5162	6874	(1552)	1133227
21036	17.4	1.4	1.6	chr14	24011391	24015051	(83028667)	C	HERVK-int	LTR/ERVK	(3880)	3656	1	1133650
425	26.5	15.8	0.0	chr14	24806168	24806385	(82237333)	C	MIRb	SINE/MIR	(8)	260	2	1134686
371	30.4	21.0	2.5	chr14	30383850	30384092	(76659626)	C	L2c	LINE/L2	(17)	3370	3071	1141751
235	31.7	7.9	2.1	chr14	30384122	30384311	(76659407)	C	L2	LINE/L2	(1597)	1822	1621	1141752
249	37.5	9.5	0.0	chr14	30569840	30569991	(76473727)	+	L2c	LINE/L2	2991	3158	(229)	1141997
3204	16.4	2.9	4.7	chr14	30570049	30570821	(76472897)	C	L1M4	LINE/L1	(5583)	1934	1264	1141998
1961	9.3	1.2	0.0	chr14	30701316	30701563	(76342155)	+	AluSq	SINE/Alu	44	294	(19)	1142183
455	29.6	4.6	3.1	chr14	30701749	30701940	(76341778)	+	MamRep137	DNA/TcMar-Tigger	16	210	(300)	1142184
477	29.9	7.4	4.7	chr14	30701961	30702171	(76341547)	+	MamRep137	DNA/TcMar-Tigger	293	509	(1)	1142185
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
205	21.9	1.5	9.9	chr14	31208260	31208330	(75835388)	C	MIRb	SINE/MIR	(82)	186	122	1143147
406	32.2	4.3	3.4	chr14	31561070	31561275	(75482443)	+	MIRc	SINE/MIR	44	251	(17)	1143879
1505	25.1	6.2	1.2	chr14	31993071	31993860	(75049858)	C	L2a	LINE/L2	(6)	3420	2576	1144483
2388	8.3	0.3	0.0	chr14	32112595	32112883	(74930835)	+	AluY	SINE/Alu	5	294	(17)	1144683
47	0.0	0.0	0.0	chr14	34672865	34672906	(72370812)	+	(TTA)n	Simple_repeat	1	42	(0)	1148386
2139	7.8	0.7	2.1	chr14	34672907	34673190	(72370528)	C	AluSx1	SINE/Alu	(32)	280	1	1148387
10972	13.3	9.5	9.0	chr14	35133219	35134396	(71909322)	C	L1M1	LINE/L1	(5129)	2436	1205	1149412
204	21.9	4.5	3.0	chr14	35383802	35383867	(71659851)	C	L2c	LINE/L2	(498)	2921	2855	1149928
1869	18.7	8.7	4.0	chr14	36452175	36452654	(70591064)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1151627
278	35.8	4.1	3.0	chr14	36605350	36605516	(70438202)	+	MIR3	SINE/MIR	35	203	(5)	1151824
370	27.5	9.7	2.3	chr14	36820490	36820641	(70223077)	+	MIR3	SINE/MIR	3	159	(49)	1152098
7129	12.8	5.0	3.3	chr14	37013809	37015040	(70028678)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1166	1152358
3627	7.9	0.8	0.4	chr14	37205471	37205938	(69837780)	C	L1PA6	LINE/L1	(1)	6153	5684	1152662
11490	9.6	1.9	1.7	chr14	37205939	37207095	(69836623)	+	THE1B-int	LTR/ERVL-MaLR	418	1580	(0)	1152660
20427	15.6	5.0	0.8	chr14	37686965	37688588	(69355130)	+	L1MA2	LINE/L1	16	1765	(5800)	1153287
30	3.5	0.0	0.0	chr14	37688589	37688618	(69355100)	+	(GA)n	Simple_repeat	1	30	(0)	1153288
20427	13.8	4.5	2.0	chr14	37688619	37691047	(69352671)	+	L1MA2	LINE/L1	1766	4224	(3341)	1153287
228	34.6	2.2	2.2	chr14	37906498	37906636	(69137082)	+	LTR78	LTR/ERV1	261	399	(905)	1153557
1497	21.9	13.4	1.3	chr14	37906664	37906738	(69136980)	+	L1MC4	LINE/L1	6593	6687	(1355)	1153558
21	4.1	0.0	0.0	chr14	39395895	39395919	(67647799)	+	(G)n	Simple_repeat	1	25	(0)	1155672
373	25.8	15.6	5.2	chr14	39395929	39396214	(67647504)	+	Charlie17b	DNA/hAT-Charlie	357	677	(527)	1155673
1846	21.2	7.4	1.9	chr14	49173581	49174657	(57869061)	+	L1MA8	LINE/L1	1723	2682	(4883)	1167624
16898	15.6	1.1	2.4	chr14	49239113	49241938	(57801780)	C	L1PA16	LINE/L1	(4016)	2837	26	1167688
2306	5.4	0.0	1.1	chr14	49635354	49635631	(57408087)	+	AluYm1	SINE/Alu	1	275	(36)	1168310
30	20.0	1.0	6.7	chr14	50830712	50830815	(56212903)	+	(CCCCGC)n	Simple_repeat	1	105	(0)	1170531
1792	13.7	6.1	0.4	chr14	50912363	50912640	(56131078)	C	AluSx	SINE/Alu	(16)	296	2	1170665
282	29.8	1.1	0.0	chr14	50955440	50955533	(56088185)	+	LTR88b	LTR/Gypsy?	32	126	(711)	1170742
681	27.3	13.7	2.4	chr14	50955552	50955847	(56087871)	+	LTR88b	LTR/Gypsy?	29	363	(474)	1170743
1989	14.9	0.0	6.2	chr14	52961391	52961712	(54082006)	+	AluJb	SINE/Alu	1	302	(10)	1173842
2029	16.3	0.8	1.3	chr14	53406611	53406983	(53636735)	+	MLT1A1	LTR/ERVL-MaLR	26	396	(12)	1174485
639	23.1	4.5	2.3	chr14	53407147	53407319	(53636399)	+	MIRb	SINE/MIR	81	257	(11)	1174486
2204	22.5	6.2	2.2	chr14	53562543	53563273	(53480445)	+	L1ME1	LINE/L1	3684	4445	(1701)	1174694
17	3.2	0.0	10.3	chr14	54338558	54338596	(52705122)	+	(TTGT)n	Simple_repeat	1	39	(0)	1175783
26207	2.5	0.4	0.0	chr14	57112211	57118214	(49925504)	+	L1PA2	LINE/L1	124	6152	(3)	1180266
1140	26.4	9.1	1.9	chr14	57528270	57528668	(49515050)	C	LTR33	LTR/ERVL	(0)	515	65	1180886
19	18.2	7.5	3.5	chr14	58200077	58200156	(48843562)	+	(CCGCGG)n	Simple_repeat	1	86	(0)	1181806
19	18.0	10.9	2.0	chr14	58200157	58200165	(48843553)	+	(AGCGCCG)n	Simple_repeat	4	102	(0)	1181807
1475	19.4	8.5	0.0	chr14	59165799	59166056	(47877662)	C	AluJb	SINE/Alu	(30)	282	1	1183355
2316	11.0	1.0	0.3	chr14	59166088	59166396	(47877322)	+	AluSp	SINE/Alu	3	313	(0)	1183356
19908	12.8	3.1	1.8	chr14	59385688	59387891	(47655827)	C	L1MA3	LINE/L1	(3603)	3962	1753	1183637
68	0.0	0.0	0.0	chr14	59387892	59387949	(47655769)	+	(TG)n	Simple_repeat	1	58	(0)	1183645
19908	13.1	2.5	1.9	chr14	59387950	59389556	(47654162)	C	L1MA3	LINE/L1	(5813)	1752	129	1183637
359	33.5	7.2	2.5	chr14	59931193	59931351	(47112367)	C	MIRc	SINE/MIR	(14)	254	88	1184368
16	21.6	1.9	3.8	chr14	59931379	59931430	(47112288)	+	(TCC)n	Simple_repeat	1	53	(0)	1184369
2178	27.8	6.0	2.7	chr14	59939295	59940078	(47103640)	C	L2	LINE/L2	(453)	2966	2155	1184382
428	26.5	14.9	2.8	chr14	59940510	59940726	(47102992)	+	MIRc	SINE/MIR	2	249	(19)	1184383
321	29.3	4.1	2.8	chr14	60562556	60562699	(46481019)	+	L2a	LINE/L2	3276	3421	(5)	1185185
2141	16.8	0.7	6.7	chr14	64095764	64096197	(42947521)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1190665
1051	23.2	8.7	0.0	chr14	64096204	64096466	(42947252)	C	Charlie1a	DNA/hAT-Charlie	(1167)	288	1	1190662
821	18.4	0.0	5.2	chr14	65416316	65416451	(41627267)	C	FLAM_A	SINE/Alu	(13)	129	1	1193136
1968	15.5	7.6	2.8	chr14	65472057	65472455	(41571263)	C	MSTB1	LTR/ERVL-MaLR	(12)	420	1	1193240
13839	15.6	3.1	2.0	chr14	66930820	66932444	(40111274)	C	L1MA3	LINE/L1	(4385)	3180	1541	1195204
990	18.9	1.8	0.6	chr14	67628220	67628388	(39415330)	C	FAM	SINE/Alu	(14)	171	1	1196449
540	23.8	0.0	0.0	chr14	67704111	67704232	(39339486)	C	ERV24_Prim-int	LTR/ERV1	(4977)	2598	2477	1196592
583	32.8	4.3	4.1	chr14	67704205	67704595	(39339123)	C	ERV24_Prim-int	LTR/ERV1	(6234)	1341	950	1196592
2240	9.1	0.0	0.0	chr14	69226466	69226740	(37816978)	+	AluSx1	SINE/Alu	1	275	(37)	1199119
17	0.0	0.0	0.0	chr14	69226774	69226792	(37816926)	+	(T)n	Simple_repeat	1	19	(0)	1199120
1042	17.2	9.2	0.0	chr14	69227089	69227286	(37816432)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1199121
1563	23.8	12.8	5.5	chr14	69447219	69447629	(37596089)	+	L1MEb	LINE/L1	6	476	(5594)	1199536
1846	17.6	0.0	0.3	chr14	69447630	69447930	(37595788)	+	AluJo	SINE/Alu	1	300	(12)	1199537
2477	7.4	0.0	1.0	chr14	69447937	69448246	(37595472)	+	AluYm1	SINE/Alu	5	311	(0)	1199538
6726	5.8	1.9	1.6	chr14	71019762	71021474	(36022244)	C	L1PA7	LINE/L1	(2)	6152	4440	1202121
334	36.6	9.0	3.4	chr14	71021591	71022028	(36021690)	+	L2	LINE/L2	1932	2396	(1023)	1202122
7436	19.4	3.6	1.9	chr14	71720580	71722334	(35321384)	C	L1M1	LINE/L1	(5056)	2509	22	1203229
2350	9.4	0.7	0.0	chr14	71753640	71753938	(35289780)	+	AluSx1	SINE/Alu	2	302	(10)	1203269
773	21.4	4.4	0.0	chr14	72173147	72173319	(34870399)	+	MER20	DNA/hAT-Charlie	36	216	(3)	1203898
316	26.5	0.8	3.3	chr14	73339170	73339290	(33704428)	+	MER20B	DNA/hAT-Charlie	665	782	(1)	1205997
1030	26.3	2.7	0.4	chr14	73339297	73339548	(33704170)	+	L2a	LINE/L2	2914	3171	(255)	1205994
917	14.5	0.0	2.2	chr14	73339554	73339691	(33704027)	C	FLAM_C	SINE/Alu	(8)	135	1	1205998
2272	17.4	3.4	0.2	chr14	73422491	73422888	(33620830)	C	MSTB	LTR/ERVL-MaLR	(15)	411	1	1206225
16	0.0	0.0	0.0	chr14	73422909	73422925	(33620793)	+	(A)n	Simple_repeat	1	17	(0)	1206226
4426	21.2	3.2	6.9	chr14	73525969	73527455	(33516263)	+	L1M1	LINE/L1	115	2220	(5345)	1206471
530	9.9	12.5	0.0	chr14	73527456	73527546	(33516172)	+	MER41A	LTR/ERV1	363	466	(88)	1206473
2318	10.3	0.0	0.0	chr14	73610291	73610590	(33433128)	C	AluSz	SINE/Alu	(12)	300	1	1206671
5350	15.3	3.4	3.1	chr14	73610591	73610697	(33433021)	+	MER70-int	LTR/ERVL	4919	5022	(1)	1206669
2638	15.9	6.8	1.4	chr14	73610704	73611149	(33432569)	+	MER70A	LTR/ERVL	1	472	(0)	1206669
304	15.3	1.4	6.5	chr14	75286281	75286357	(31757361)	+	LTR9	LTR/ERV1	458	530	(82)	1210118
949	31.1	6.9	5.2	chr14	75286399	75286751	(31756967)	+	L2a	LINE/L2	2933	3286	(140)	1210119
1560	17.3	3.8	3.6	chr14	75483881	75484327	(31559391)	C	MLT1A1	LTR/ERVL-MaLR	(2)	426	7	1210545
354	34.2	4.5	8.0	chr14	75484350	75484600	(31559118)	C	L1ME3C	LINE/L1	(57)	6066	5825	1210547
527	26.0	5.7	0.7	chr14	76640574	76640724	(30402994)	C	MER5A	DNA/hAT-Charlie	(24)	165	7	1212657
328	31.8	15.9	2.0	chr14	76640796	76641076	(30402642)	+	L2c	LINE/L2	3038	3387	(0)	1212655
366	26.6	12.3	5.4	chr14	76810573	76810926	(30232792)	+	Tigger15a	DNA/TcMar-Tigger	131	512	(203)	1212983
997	18.5	6.4	0.0	chr14	76811046	76811250	(30232468)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1212984
14	0.0	0.0	0.0	chr14	76811406	76811423	(30232295)	+	(TGG)n	Simple_repeat	1	18	(0)	1212985
203	32.4	13.3	1.8	chr14	76932014	76932352	(30111366)	+	L2c	LINE/L2	2685	3068	(351)	1213236
16	0.0	0.0	0.0	chr14	77033326	77033342	(30010376)	+	(A)n	Simple_repeat	1	17	(0)	1213476
417	24.2	0.0	13.5	chr14	77053097	77053244	(29990474)	+	MIRb	SINE/MIR	103	230	(38)	1213514
14	11.2	10.3	0.0	chr14	77132275	77132313	(29911405)	+	(CCACTG)n	Simple_repeat	1	43	(0)	1213665
223	29.0	9.2	0.0	chr14	77132513	77132581	(29911137)	C	L3	LINE/CR1	(10)	4089	4014	1213666
241	30.9	1.2	0.0	chr14	77132583	77132663	(29911055)	C	CR1-3_Croc	LINE/CR1	(609)	2996	2915	1213667
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
2349	10.7	0.0	0.0	chr14	78266297	78266596	(28777122)	C	AluSc5	SINE/Alu	(9)	300	1	1215933
227	41.4	0.0	0.9	chr14	78267011	78267122	(28776596)	C	MER117	DNA/hAT-Charlie	(34)	163	53	1215934
640	20.9	4.5	1.6	chr14	89284181	89284309	(17759409)	C	AluJr4	SINE/Alu	(179)	133	1	1231793
277	30.0	1.7	3.5	chr14	89284312	89284419	(17759299)	C	MIR3	SINE/MIR	(115)	153	48	1231794
992	29.2	6.3	6.8	chr14	91753830	91754021	(15289697)	+	LTR16A2	LTR/ERVL	2	222	(273)	1236264
626	21.1	3.7	20.2	chr14	91754022	91754283	(15289435)	+	MER20	DNA/hAT-Charlie	1	217	(2)	1236265
187	34.6	0.0	0.0	chr14	94079803	94079880	(12963838)	C	L2c	LINE/L2	(8)	3379	3302	1240577
450	28.3	4.8	6.2	chr14	94079965	94080156	(12963562)	+	MIRb	SINE/MIR	47	235	(33)	1240578
273	35.9	2.2	6.2	chr14	94080453	94080645	(12963073)	+	MIRb	SINE/MIR	47	231	(37)	1240579
21	17.8	0.0	0.0	chr14	94080696	94080733	(12962985)	+	A-rich	Low_complexity	1	38	(0)	1240580
2299	11.7	3.9	3.3	chr14	94882080	94882441	(12161277)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1242048
1603	16.1	6.2	9.3	chr14	94882442	94882531	(12161187)	+	MLT1B	LTR/ERVL-MaLR	105	198	(192)	1242047
36	0.0	0.0	0.0	chr14	94882532	94882562	(12161156)	+	(AC)n	Simple_repeat	1	31	(0)	1242049
1603	16.1	6.2	9.3	chr14	94882563	94882761	(12160957)	+	MLT1B	LTR/ERVL-MaLR	199	386	(4)	1242047
247	29.1	9.0	0.6	chr14	95282875	95283032	(11760686)	C	MIR1_Amn	SINE/MIR	(18)	190	24	1242716
2550	8.0	1.4	0.3	chr14	95283048	95283398	(11760320)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1242717
2505	9.7	0.0	0.0	chr14	96235067	96235374	(10808344)	+	AluSx1	SINE/Alu	2	309	(3)	1244512
12	18.0	0.0	7.0	chr14	96363020	96363062	(10680656)	+	(CGGCTC)n	Simple_repeat	1	43	(0)	1244738
1527	22.6	6.1	7.1	chr14	96665894	96666370	(10377348)	+	LTR55	LTR/ERVL?	75	546	(2)	1245280
222	25.3	2.2	5.4	chr14	99471950	99472041	(7571677)	C	MIRb	SINE/MIR	(140)	128	40	1250085
22	17.5	0.0	0.0	chr14	100192175	100192213	(6851505)	+	A-rich	Low_complexity	1	39	(0)	1251384
186	27.4	10.1	0.0	chr14	100470819	100470880	(6572838)	C	L2c	LINE/L2	(46)	3341	3273	1251917
206	29.6	9.0	0.0	chr14	100470987	100471057	(6572661)	C	L2b	LINE/L2	(1)	3374	3297	1251918
253	30.3	8.2	0.0	chr14	100471137	100471281	(6572437)	+	L2b	LINE/L2	3204	3361	(14)	1251919
285	32.0	13.2	1.5	chr14	100476592	100476791	(6566927)	+	MIRb	SINE/MIR	28	254	(14)	1251926
19	16.9	0.0	0.0	chr14	100905129	100905161	(6138557)	+	A-rich	Low_complexity	1	33	(0)	1252549
38	41.3	1.0	0.0	chr14	101235012	101235218	(5808500)	+	(GT)n	Simple_repeat	1	209	(0)	1252906
1885	8.0	8.7	4.0	chr14	101941059	101941332	(5102386)	+	AluSc	SINE/Alu	1	288	(21)	1253902
3845	5.8	0.0	0.0	chr14	101941430	101941898	(5101820)	C	L1PA5	LINE/L1	(0)	6154	5686	1253903
232	23.6	13.6	2.2	chr14	102755836	102755926	(4287792)	C	MIR3	SINE/MIR	(2)	206	104	1255617
2306	11.2	0.3	0.0	chr14	103800846	103801149	(3242569)	C	AluSp	SINE/Alu	(8)	305	1	1257519
253	26.8	13.4	6.0	chr14	103819722	103819872	(3223846)	+	MLT1M	LTR/ERVL-MaLR	502	665	(7)	1257563
413	29.5	4.5	0.7	chr14	103819880	103820029	(3223689)	C	MIRb	SINE/MIR	(108)	160	5	1257564
387	30.4	0.8	0.8	chr15	23073019	23073144	(78918045)	+	MLT1N2	LTR/ERVL-MaLR	432	557	(5)	1266825
464	21.1	3.2	1.1	chr15	23073223	23073313	(78917876)	+	MER96	DNA/hAT-Tip100	1	93	(82)	1266826
448	26.5	6.2	2.4	chr15	23073520	23073689	(78917500)	+	MIRc	SINE/MIR	71	247	(21)	1266827
6416	20.3	13.2	8.2	chr15	28085842	28087468	(73903721)	+	L1MDa	LINE/L1	279	2081	(4552)	1273390
3454	23.2	3.1	0.4	chr15	28972699	28973523	(73017666)	+	MER97a	DNA/hAT-Tip100	2	849	(41)	1274821
1422	26.4	8.2	2.0	chr15	30828300	30828988	(71162201)	C	L1MC5	LINE/L1	(479)	8825	8188	1277683
301	35.1	11.5	3.4	chr15	31197892	31198130	(70793059)	+	MIRb	SINE/MIR	5	265	(3)	1278259
14	21.3	0.0	4.7	chr15	31198133	31198175	(70793014)	+	(CCT)n	Simple_repeat	1	43	(0)	1278260
740	27.6	10.9	4.9	chr15	34022766	34022905	(67968284)	C	L1MEf	LINE/L1	(5855)	345	192	1282128
2688	24.1	5.5	2.4	chr15	35737219	35738360	(66252829)	C	L1M5	LINE/L1	(483)	5690	4549	1284763
1550	20.3	4.6	1.4	chr15	35738361	35738655	(66252534)	+	AluJr	SINE/Alu	2	306	(6)	1284764
1644	27.9	8.3	8.0	chr15	35738656	35739118	(66252071)	C	L1M5	LINE/L1	(1598)	4548	4060	1284763
273	21.4	4.1	1.4	chr15	39455193	39455263	(62535926)	+	L2b	LINE/L2	3103	3175	(212)	1289707
315	26.9	8.8	0.0	chr15	39455275	39455367	(62535822)	+	L2b	LINE/L2	3272	3373	(2)	1289707
12	9.7	0.0	0.0	chr15	39920192	39920213	(62070976)	+	(GGGA)n	Simple_repeat	1	22	(0)	1290387
3677	20.0	15.7	9.3	chr15	40678684	40679326	(61311863)	C	L1MA3	LINE/L1	(5118)	2447	1653	1291691
2505	6.7	0.0	0.0	chr15	40679327	40679623	(61311566)	C	AluYf1	SINE/Alu	(14)	297	1	1291709
12044	13.8	3.5	0.1	chr15	40684261	40686039	(61305150)	C	L1M1	LINE/L1	(5210)	2355	514	1291713
617	21.3	13.1	0.3	chr15	41402121	41402288	(60588901)	C	MIR	SINE/MIR	(2)	266	66	1293268
2381	9.1	0.0	1.6	chr15	41671320	41671628	(60319561)	C	AluSx	SINE/Alu	(8)	304	1	1293879
1721	20.3	0.3	0.3	chr15	41672159	41672454	(60318735)	C	AluJb	SINE/Alu	(16)	296	1	1293880
5083	21.5	1.8	7.0	chr15	42704211	42704675	(59286514)	C	L1M1	LINE/L1	(5278)	2287	1825	1295618
1417	28.4	8.0	2.7	chr15	42704689	42705418	(59285771)	C	L1M1	LINE/L1	(6654)	835	17	1295618
18	29.4	3.9	2.8	chr15	42736414	42736517	(59254672)	+	(GCCCCCG)n	Simple_repeat	1	108	(0)	1295666
325	35.2	0.4	0.2	chr15	43983598	43983718	(58007471)	+	MIR3	SINE/MIR	6	127	(141)	1297978
2102	13.2	0.7	0.0	chr15	44705812	44706099	(57285090)	C	AluSz	SINE/Alu	(22)	290	1	1299419
14374	18.2	5.5	5.5	chr15	44706100	44708322	(57282867)	C	L1MA3	LINE/L1	(5309)	2256	15	1299410
181	23.9	4.2	0.0	chr15	48789210	48789255	(53201934)	C	L2a	LINE/L2	(278)	3148	3101	1305319
2299	17.8	5.8	4.3	chr15	48789475	48789967	(53201222)	+	MLT1D	LTR/ERVL-MaLR	5	505	(0)	1305320
20373	14.2	2.8	2.8	chr15	50162806	50165040	(51826149)	C	L1M1	LINE/L1	(5101)	2464	182	1307199
12	5.5	0.0	0.0	chr15	50686568	50686586	(51304603)	+	(CTC)n	Simple_repeat	1	19	(0)	1308294
12	15.7	2.6	5.0	chr15	50908243	50908281	(51082908)	+	(CGCCGG)n	Simple_repeat	1	40	(0)	1308764
17	26.7	0.0	0.0	chr15	50908730	50908778	(51082411)	+	(GGC)n	Simple_repeat	1	49	(0)	1308765
483	27.1	21.3	0.5	chr15	51579832	51580031	(50411158)	C	MIRb	SINE/MIR	(12)	256	4	1309718
230	34.6	2.8	2.8	chr15	52103139	52103385	(49887804)	+	L2-3_Crp	LINE/L2	616	862	(1234)	1310724
203	17.3	3.7	0.0	chr15	52103400	52103451	(49887738)	+	L2	LINE/L2	2079	2132	(1287)	1310720
1823	13.2	0.0	8.3	chr15	52103803	52103972	(49887217)	C	AluJb	SINE/Alu	(12)	300	144	1310725
1934	14.8	1.0	0.3	chr15	52103973	52104263	(49886926)	C	AluJb	SINE/Alu	(19)	293	1	1310726
21	11.8	0.0	2.6	chr15	52530079	52530117	(49461072)	+	(TTG)n	Simple_repeat	1	39	(0)	1311448
1122	20.6	18.2	0.8	chr15	55174660	55175012	(46816177)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1315061
12	20.8	6.7	0.0	chr15	55587939	55587983	(46403206)	+	(GCTGCG)n	Simple_repeat	1	48	(0)	1315824
19070	16.6	3.2	1.8	chr15	55968860	55971342	(46019847)	+	L1M1	LINE/L1	12	2523	(5042)	1316502
825	22.0	2.7	0.7	chr15	56205563	56205870	(45785319)	+	L1MA3	LINE/L1	4771	4951	(1195)	1316847
4438	15.2	3.1	3.5	chr15	56205841	56207135	(45784054)	+	L1MA3	LINE/L1	5407	6285	(20)	1316847
15	20.6	0.0	2.4	chr15	58625028	58625068	(43366121)	+	(AACAAT)n	Simple_repeat	1	41	(0)	1320522
5227	18.2	3.6	1.9	chr15	58625130	58626343	(43364846)	+	L1MD2	LINE/L1	5113	6357	(2)	1320523
6880	9.3	2.4	1.1	chr15	58833342	58834296	(43156893)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	1320919
15388	11.2	3.5	0.7	chr15	59342489	59344816	(42646373)	C	L1M1	LINE/L1	(3859)	3706	1299	1321865
2508	7.1	0.7	0.0	chr15	60359975	60360283	(41630906)	+	AluSp	SINE/Alu	1	311	(2)	1323652
1741	19.0	4.7	12.3	chr15	62262415	62263071	(39728118)	C	LTR10E	LTR/ERV1	(67)	566	1	1326597
12644	12.6	1.5	0.4	chr15	62333783	62335669	(39655520)	C	L1M1	LINE/L1	(4502)	3063	1155	1326707
245	33.0	8.0	2.5	chr15	63089288	63089405	(38901784)	+	L3	LINE/CR1	3901	4025	(74)	1327928
1507	25.6	4.0	1.3	chr15	63089894	63090359	(38900830)	+	ORSL-2b	DNA/hAT-Tip100	30	508	(0)	1327929
61	24.9	5.3	2.5	chr15	63277309	63277571	(38713618)	+	(CCGCGCC)n	Simple_repeat	1	277	(0)	1328275
366	29.3	10.4	0.6	chr15	63945613	63945777	(38045412)	+	MIR3	SINE/MIR	4	186	(22)	1329449
1793	11.4	2.7	5.0	chr15	64951271	64955041	(37036148)	+	(TTC)n	Simple_repeat	1	3874	(0)	1331580
1639	20.3	4.0	4.0	chr15	66034723	66035118	(35956071)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1333863
325	31.9	0.0	0.0	chr15	66035120	66035213	(35955976)	+	MIRb	SINE/MIR	164	257	(11)	1333868
188	26.9	3.1	13.1	chr15	66356305	66356411	(35634778)	C	L2c	LINE/L2	(1)	3386	3291	1334509
251	29.0	7.0	2.1	chr15	66750314	66750408	(35240781)	+	L2c	LINE/L2	3282	3381	(6)	1335386
209	32.3	11.6	0.0	chr15	66750432	66750530	(35240659)	C	L2b	LINE/L2	(18)	3357	3246	1335387
865	24.4	18.8	1.8	chr15	66750574	66750966	(35240223)	C	LTR16C	LTR/ERVL	(13)	476	12	1335388
17721	10.9	1.5	1.6	chr15	66988154	66991154	(35000035)	+	L1M1	LINE/L1	1099	4109	(3456)	1335836
213	33.1	6.1	3.1	chr15	67254223	67254350	(34736839)	C	MIRc	SINE/MIR	(13)	255	124	1336323
1682	24.7	4.5	6.3	chr15	67255931	67256609	(34734580)	C	MER77	LTR/ERVL	(174)	764	54	1336324
346	36.1	6.7	0.0	chr15	67863995	67864174	(34127015)	C	MIRc	SINE/MIR	(53)	215	23	1337258
5405	16.4	4.8	1.7	chr15	68096181	68097289	(33893900)	C	L1M3	LINE/L1	(1245)	4895	3751	1337733
917	26.1	5.3	7.8	chr15	68630606	68631013	(33360176)	C	MLT1L	LTR/ERVL-MaLR	(3)	607	211	1338716
274	30.4	2.1	5.2	chr15	68631296	68631392	(33359797)	C	MIRb	SINE/MIR	(94)	174	81	1338715
1284	25.4	16.6	6.2	chr15	68888102	68888904	(33102285)	C	L1MCc	LINE/L1	(5502)	921	19	1339249
1226	24.1	2.6	2.9	chr15	68888913	68889296	(33101893)	+	Charlie10	DNA/hAT-Charlie	2158	2540	(282)	1339250
10133	17.6	1.4	0.2	chr15	68993707	68995365	(32995824)	C	HERV3-int	LTR/ERV1	(4548)	3878	2200	1339417
671	28.1	2.9	0.4	chr15	69389233	69389464	(32601725)	+	MIR	SINE/MIR	6	243	(19)	1340124
789	27.2	6.6	0.8	chr15	69478591	69478831	(32512358)	+	MIRb	SINE/MIR	4	259	(9)	1340304
265	35.0	4.1	1.7	chr15	69504702	69504867	(32486322)	+	MIRb	SINE/MIR	70	246	(22)	1340359
333	31.8	5.5	1.9	chr15	69504873	69505029	(32486160)	+	CR1_Mam	LINE/CR1	1774	1936	(268)	1340360
285	30.6	10.6	3.1	chr15	69796135	69796326	(32194863)	+	MIRc	SINE/MIR	3	210	(58)	1340916
2270	7.2	0.0	6.5	chr15	69796385	69796705	(32194484)	C	AluSp	SINE/Alu	(12)	301	2	1340917
1371	34.6	6.7	5.1	chr15	70270839	70271841	(31719348)	+	ERVL-B4-int	LTR/ERVL	4184	5277	(437)	1341830
522	26.5	13.2	5.5	chr15	70340629	70340864	(31650325)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	338	1341971
985	20.9	11.6	1.4	chr15	70420151	70420437	(31570752)	C	L1ME3	LINE/L1	(7)	6155	5836	1342114
599	26.4	15.8	5.9	chr15	70420493	70420918	(31570271)	+	MLT1J	LTR/ERVL-MaLR	29	504	(8)	1342115
252	21.1	5.0	0.0	chr15	70617753	70617809	(31373380)	+	LTR33C	LTR/ERVL	1	60	(569)	1342482
1726	24.4	5.7	3.5	chr15	70617892	70618401	(31372788)	+	LTR33C	LTR/ERVL	108	629	(0)	1342482
338	20.2	3.7	8.0	chr15	70618404	70618516	(31372673)	C	L1MB7	LINE/L1	(216)	6026	5919	1342478
263	33.9	9.8	2.8	chr15	70624904	70625082	(31366107)	C	L1MEg	LINE/L1	(5886)	356	164	1342487
189	22.6	1.9	7.0	chr15	70625189	70625245	(31365944)	C	OldhAT1	DNA/hAT-Ac	(1020)	1828	1775	1342491
12	5.6	0.0	0.0	chr15	70625399	70625417	(31365772)	+	(CTT)n	Simple_repeat	1	19	(0)	1342492
1060	11.3	30.6	0.7	chr15	70675740	70676024	(31315165)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1342567
194	31.1	2.4	6.9	chr15	71325354	71325484	(30665705)	C	L2b	LINE/L2	(16)	3359	3235	1343552
896	30.6	7.3	1.0	chr15	71446574	71446972	(30544217)	C	MLT1L	LTR/ERVL-MaLR	(10)	600	175	1343741
238	22.2	0.0	0.0	chr15	71447034	71447087	(30544102)	C	MLT1L	LTR/ERVL-MaLR	(549)	61	8	1343741
2282	10.0	0.0	3.7	chr15	71447110	71447430	(30543759)	C	AluSc	SINE/Alu	(0)	309	1	1343742
587	27.4	7.1	3.5	chr15	71669608	71669838	(30321351)	C	HAL1ME	LINE/L1	(1541)	924	685	1344140
3336	4.4	0.3	0.0	chr15	71670083	71670465	(30320724)	C	L1PA6	LINE/L1	(1)	6153	5770	1344141
1583	18.4	0.8	0.0	chr15	71927163	71927471	(30063718)	C	L1MA7	LINE/L1	(942)	6777	6455	1344567
808	24.4	1.7	1.1	chr15	71927472	71927645	(30063544)	C	MER8	DNA/TcMar-Tigger	(0)	239	65	1344575
265	19.1	0.0	0.0	chr15	71927693	71927734	(30063455)	C	MER8	DNA/TcMar-Tigger	(181)	58	17	1344575
183	30.9	2.0	8.5	chr15	72461952	72462057	(29529132)	+	MIR3	SINE/MIR	5	103	(105)	1345516
2284	10.7	0.7	1.7	chr15	72462150	72462449	(29528740)	C	AluSz6	SINE/Alu	(15)	297	1	1345517
457	33.3	9.4	7.7	chr15	72462466	72462623	(29528566)	+	L2c	LINE/L2	2966	3123	(264)	1345518
2260	26.0	6.5	1.9	chr15	73005040	73006059	(28985130)	C	L2a	LINE/L2	(4)	3422	2357	1346446
16	13.2	0.0	0.0	chr15	73052406	73052430	(28938759)	+	(C)n	Simple_repeat	1	25	(0)	1346526
12	16.5	5.9	0.0	chr15	73052443	73052476	(28938713)	+	(CTCCC)n	Simple_repeat	1	36	(0)	1346527
19	17.9	1.9	3.6	chr15	73052520	73052573	(28938616)	+	G-rich	Low_complexity	1	55	(0)	1346528
13	10.5	6.5	0.0	chr15	73052629	73052659	(28938530)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	1346529
21	15.4	4.8	6.9	chr15	73052747	73052829	(28938360)	+	G-rich	Low_complexity	1	87	(0)	1346530
221	35.0	8.7	1.4	chr15	73306180	73306318	(28684871)	C	MamRTE1	LINE/RTE-BovB	(2861)	951	802	1346914
393	20.5	11.8	9.9	chr15	74229150	74229211	(27761978)	+	MIR	SINE/MIR	79	152	(110)	1348488
2310	11.0	0.3	0.0	chr15	74229212	74229519	(27761670)	+	AluSx1	SINE/Alu	2	310	(2)	1348489
293	22.2	2.7	0.0	chr15	74769098	74769169	(27222020)	C	MamRep1879	DNA/hAT-Tip100?	(72)	144	71	1349484
216	30.3	1.3	0.0	chr15	75842893	75842968	(26148221)	C	L2a	LINE/L2	(676)	2743	2667	1351618
14108	14.2	3.0	0.8	chr15	76577475	76579020	(25412169)	+	L1MA3	LINE/L1	731	2297	(5268)	1352790
31	0.0	0.0	0.0	chr15	77024727	77024755	(24966434)	+	(TCCC)n	Simple_repeat	1	29	(0)	1353428
404	28.6	14.0	1.5	chr15	77067895	77068100	(24923089)	+	MIRb	SINE/MIR	31	266	(2)	1353485
1401	25.0	4.6	1.7	chr15	77266333	77266690	(24724499)	+	L1MDa	LINE/L1	814	1182	(5451)	1353782
1147	16.1	0.5	0.0	chr15	77266694	77266892	(24724297)	+	L1PB1	LINE/L1	1	200	(6663)	1353783
10601	13.5	4.1	2.6	chr15	77266901	77268193	(24722996)	+	L1PB1	LINE/L1	838	2104	(4759)	1353783
953	23.1	5.0	1.4	chr15	78174861	78175104	(23816085)	C	MIR	SINE/MIR	(0)	268	7	1355365
1700	13.9	8.8	2.3	chr15	78247309	78247574	(23743615)	+	AluJo	SINE/Alu	1	285	(27)	1355500
17	4.3	0.0	0.0	chr15	78247575	78247598	(23743591)	+	(GGGA)n	Simple_repeat	1	24	(0)	1355501
1091	18.4	6.2	2.1	chr15	78247603	78247835	(23743354)	+	MLT1D	LTR/ERVL-MaLR	263	505	(0)	1355499
262	28.3	8.0	2.1	chr15	78247913	78248006	(23743183)	C	L2b	LINE/L2	(14)	3412	3272	1355502
2225	8.5	0.7	0.0	chr15	78630144	78630437	(23360752)	C	AluSx	SINE/Alu	(16)	296	1	1356300
248	31.1	4.7	7.0	chr15	79359129	79359230	(22631959)	+	LTR85c	LTR/Gypsy?	1	101	(683)	1357731
2499	8.8	1.6	0.0	chr15	79359231	79359527	(22631662)	C	AluSx1	SINE/Alu	(10)	302	1	1357732
496	29.8	18.3	0.6	chr15	80662592	80662932	(21328257)	C	L3	LINE/CR1	(109)	3990	3576	1359881
452	25.1	8.1	6.6	chr15	80778622	80778804	(21212385)	C	MIRb	SINE/MIR	(36)	232	47	1360099
268	36.6	13.3	1.5	chr15	81266052	81266256	(20724933)	C	MIRb	SINE/MIR	(6)	262	30	1361003
393	34.1	7.1	0.6	chr15	81266291	81266473	(20724716)	C	MIRb	SINE/MIR	(56)	212	17	1361004
636	24.9	14.5	3.8	chr15	82081811	82082045	(19909144)	+	MIRb	SINE/MIR	3	262	(0)	1362322
429	19.7	3.9	6.2	chr15	82621692	82621821	(19369368)	+	L1ME3A	LINE/L1	6046	6172	(1)	1363164
272	30.3	11.8	7.3	chr15	82621892	82622165	(19369024)	C	LTR78B	LTR/ERV1	(4)	1292	1005	1363165
263	27.6	3.8	0.0	chr15	82622192	82622267	(19368922)	C	LTR78B	LTR/ERV1	(546)	750	672	1363165
905	29.1	11.9	7.3	chr15	82622284	82622423	(19368766)	C	LTR78B	LTR/ERV1	(679)	617	462	1363165
1867	12.9	3.6	1.1	chr15	82622424	82622694	(19368495)	C	AluSz	SINE/Alu	(34)	278	1	1363166
205	28.1	0.0	1.5	chr15	82808991	82809055	(19182134)	+	MIR3	SINE/MIR	113	176	(32)	1363494
211	21.7	2.1	0.0	chr15	82809100	82809145	(19182044)	+	L2c	LINE/L2	3333	3379	(8)	1363495
2195	26.5	9.5	2.7	chr15	82901758	82902197	(19088992)	+	Charlie14a	DNA/hAT-Charlie	87	541	(625)	1363642
335	24.2	16.7	2.4	chr15	82942486	82942608	(19048581)	+	L2b	LINE/L2	3230	3373	(2)	1363720
648	27.4	6.2	6.8	chr15	83092326	83092617	(18898572)	+	MER39	LTR/ERV1	1	509	(198)	1364035
247	8.9	13.5	0.0	chr15	83092636	83092680	(18898509)	C	U2	snRNA	(135)	53	2	1364036
281	19.5	13.9	0.0	chr15	83380620	83380706	(18610483)	+	LTR88a	LTR/Gypsy?	339	439	(377)	1364542
359	29.5	11.3	2.2	chr15	83380793	83381024	(18610165)	+	LTR88a	LTR/Gypsy?	543	798	(18)	1364542
181	29.5	0.0	1.6	chr15	83395370	83395431	(18595758)	C	L3	LINE/CR1	(20)	4079	4019	1364558
305	20.9	4.4	9.5	chr15	83395706	83395800	(18595389)	+	L2c	LINE/L2	3282	3371	(16)	1364559
13	13.2	0.0	0.0	chr15	83395805	83395829	(18595360)	+	(AGGA)n	Simple_repeat	1	25	(0)	1364560
2377	5.5	0.3	4.2	chr15	83403499	83403806	(18587383)	+	AluY	SINE/Alu	1	296	(15)	1364574
1105	16.7	0.5	10.7	chr15	83403807	83403853	(18587336)	+	MER20	DNA/hAT-Charlie	174	219	(0)	1364573
53	1.8	1.7	1.7	chr15	83695205	83695262	(18295927)	+	(TG)n	Simple_repeat	1	59	(0)	1365005
12	26.5	0.0	0.0	chr15	83695277	83695310	(18295879)	+	GA-rich	Low_complexity	1	34	(0)	1365006
17236	11.1	2.3	0.7	chr15	83725389	83730038	(18261151)	C	L1MA3	LINE/L1	(985)	6580	1855	1365049
203	34.2	10.9	0.0	chr15	84910868	84911022	(17080167)	C	L2c	LINE/L2	(218)	3157	2984	1366886
293	38.7	1.9	0.0	chr15	84911292	84911446	(17079743)	C	MIR3	SINE/MIR	(0)	208	51	1366892
1829	19.3	14.9	6.2	chr15	85026134	85026669	(16964520)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	1	1367140
598	29.0	5.1	2.5	chr15	88330901	88331294	(13659895)	C	L1ME4a	LINE/L1	(3)	6121	5708	1372191
236	27.0	7.5	5.1	chr15	89430358	89430552	(12560637)	C	L1ME4b	LINE/L1	(37)	855	656	1374189
197	28.3	4.2	12.4	chr15	89430720	89430824	(12560365)	+	L2c	LINE/L2	3275	3370	(17)	1374190
12	16.6	2.6	5.0	chr15	89430904	89430942	(12560247)	+	G-rich	Low_complexity	1	40	(0)	1374191
308	23.7	7.3	2.6	chr15	89718919	89719074	(12272115)	C	L1ME3G	LINE/L1	(156)	768	605	1374738
1188	20.8	4.0	0.5	chr15	89719080	89719295	(12271894)	C	AluJb	SINE/Alu	(4)	308	85	1374739
3987	22.6	6.0	4.9	chr15	89719296	89719788	(12271401)	C	L1MEc	LINE/L1	(2569)	3750	3260	1374740
42	15.8	2.3	2.2	chr15	90190717	90190804	(11800385)	+	(GT)n	Simple_repeat	1	90	(0)	1375862
28	6.0	0.0	0.0	chr15	90201650	90201684	(11789505)	+	(GCT)n	Simple_repeat	1	35	(0)	1375888
12	4.3	8.3	0.0	chr15	90201888	90201911	(11789278)	+	(GGAGA)n	Simple_repeat	1	26	(0)	1375889
274	23.8	20.7	3.7	chr15	90401886	90402020	(11589169)	C	MIRb	SINE/MIR	(96)	172	9	1376295
2306	10.3	0.0	1.0	chr15	90834320	90834629	(11156560)	C	AluSq2	SINE/Alu	(6)	307	1	1377201
737	21.5	0.0	0.8	chr15	90834651	90834780	(11156409)	C	FLAM_A	SINE/Alu	(12)	130	2	1377202
432	21.5	7.5	2.0	chr15	90834783	90834945	(11156244)	C	MER39	LTR/ERV1	(559)	228	2	1377200
2224	12.1	1.3	0.0	chr15	92622878	92623175	(9368014)	+	AluSq	SINE/Alu	1	302	(11)	1380120
1304	15.2	20.2	1.2	chr15	92914711	92915111	(9076078)	C	LTR54B	LTR/ERV1	(2)	496	1	1380737
2261	10.2	0.0	0.0	chr15	93069107	93069409	(8921780)	C	AluSz	SINE/Alu	(9)	303	1	1380952
994	17.6	1.1	1.1	chr15	93069612	93069800	(8921389)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1380953
273	8.3	0.0	0.0	chr15	95558068	95558103	(6433086)	+	MADE1	DNA/TcMar-Mariner	1	36	(44)	1384629
259	20.8	1.9	0.0	chr15	95558183	95558235	(6432954)	C	L2a	LINE/L2	(0)	3426	3373	1384630
1075	20.0	12.2	2.4	chr15	95755784	95756033	(6235156)	C	AluJr4	SINE/Alu	(14)	298	21	1384893
2069	27.5	9.6	6.2	chr15	95756042	95757941	(6233248)	+	L1ME3B	LINE/L1	1873	3846	(2300)	1384892
21	20.7	1.9	1.9	chr15	96327105	96327156	(5664033)	+	GA-rich	Low_complexity	1	53	(0)	1385723
303	17.0	0.0	0.0	chr15	96692287	96692342	(5298847)	+	L2a	LINE/L2	3331	3425	(1)	1386238
57	1.9	0.0	0.0	chr15	96692721	96692773	(5298416)	+	(AT)n	Simple_repeat	1	53	(0)	1386244
15	13.6	4.5	4.3	chr15	97316250	97316293	(4674896)	+	(GTT)n	Simple_repeat	1	46	(0)	1387048
2260	15.7	1.7	5.6	chr15	97316294	97316725	(4674464)	C	MSTB1	LTR/ERVL-MaLR	(17)	415	1	1387049
2138	12.8	7.7	0.3	chr15	98052751	98053087	(3938102)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1388049
488	35.2	8.8	10.8	chr15	98053088	98053265	(3937924)	C	L2b	LINE/L2	(244)	3131	2930	1388048
397	19.8	17.1	1.6	chr15	98507103	98507230	(3483959)	C	L1ME2z	LINE/L1	(3)	6441	6290	1388729
2150	9.7	0.6	3.1	chr15	99107928	99108273	(2882916)	C	AluSx1	SINE/Alu	(0)	312	1	1389636
42	0.0	0.0	0.0	chr15	100721148	100721183	(1270006)	+	(TG)n	Simple_repeat	1	36	(0)	1391850
225	33.0	5.1	4.3	chr15	100721268	100721384	(1269805)	C	X6A_LINE	LINE/CR1	(104)	976	859	1391851
527	22.9	0.9	0.0	chr15	101546567	101546675	(444514)	+	MER81	DNA/hAT-Blackjack	1	110	(4)	1392926
1423	23.6	2.3	6.8	chr15	101546676	101547088	(444101)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	1392927
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
26	0.0	0.0	0.0	chr15	101724604	101724628	(266561)	+	(GGGGC)n	Simple_repeat	1	25	(0)	1393181
184	33.3	0.0	0.0	chr15	101725020	101725076	(266113)	+	L2c	LINE/L2	3279	3335	(52)	1393182
794	24.9	7.4	0.5	chr15	101725140	101725353	(265836)	C	MIR	SINE/MIR	(21)	241	12	1393183
224	32.1	7.9	2.8	chr16	25927	26070	(90312275)	C	MIRb	SINE/MIR	(83)	185	34	1394074
17	24.5	0.0	7.7	chr16	914760	914837	(89423508)	+	(TCCC)n	Simple_repeat	1	78	(0)	1395327
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
242	27.9	17.2	0.9	chr16	1959282	1959393	(88378952)	+	L2a	LINE/L2	3267	3400	(26)	1396716
2405	9.2	0.0	1.6	chr16	1971219	1971535	(88366810)	C	AluSx	SINE/Alu	(0)	312	1	1396735
264	24.6	1.4	0.0	chr16	1971582	1971650	(88366695)	+	L2a	LINE/L2	3338	3407	(19)	1396734
602	33.2	2.8	3.3	chr16	1991586	1991797	(88346548)	+	MIR	SINE/MIR	40	250	(12)	1396753
1001	24.2	11.2	1.2	chr16	2842875	2842973	(87495372)	+	L1MC5	LINE/L1	8184	8288	(1016)	1398010
2332	9.8	0.7	0.0	chr16	2842974	2843278	(87495067)	+	AluSx	SINE/Alu	1	307	(5)	1398011
1001	24.2	11.2	1.2	chr16	2843279	2843579	(87494766)	+	L1MC5	LINE/L1	8289	8628	(676)	1398010
68	0.0	1.6	0.0	chr16	3151830	3151893	(87186452)	+	(AAAAT)n	Simple_repeat	1	65	(0)	1398600
417	13.4	0.0	1.5	chr16	3152162	3152228	(87186117)	C	AluJo	SINE/Alu	(185)	127	62	1398601
5655	18.6	4.5	7.7	chr16	3627614	3628547	(86709798)	C	L1M4c	LINE/L1	(1198)	5178	4257	1399528
5000	24.3	9.3	5.1	chr16	3830433	3830793	(86507552)	+	L1MD3	LINE/L1	2451	2861	(3458)	1399870
1674	14.8	2.8	2.1	chr16	3830794	3831076	(86507269)	C	AluSx3	SINE/Alu	(23)	288	4	1399872
5000	24.3	9.3	5.1	chr16	3831077	3831714	(86506631)	+	L1MD3	LINE/L1	2862	3514	(2805)	1399870
974	17.6	24.6	0.0	chr16	4928148	4928368	(85409977)	C	AluSg	SINE/Alu	(17)	293	1	1402158
12	12.6	2.5	7.3	chr16	5092202	5092241	(85246104)	+	G-rich	Low_complexity	1	41	(0)	1402547
2183	12.6	1.0	0.0	chr16	5092681	5092989	(85245356)	+	AluSx	SINE/Alu	1	312	(0)	1402548
2664	3.5	0.0	0.3	chr16	8879829	8880140	(81458205)	C	AluY	SINE/Alu	(0)	311	1	1410050
13	16.3	0.0	5.3	chr16	8880215	8880252	(81458093)	+	G-rich	Low_complexity	1	38	(0)	1410051
2254	10.5	0.3	0.0	chr16	8880637	8880930	(81457415)	+	AluSp	SINE/Alu	1	295	(18)	1410052
1769	19.0	0.7	1.0	chr16	9003806	9004115	(81334230)	C	AluJb	SINE/Alu	(3)	309	1	1410300
592	21.5	12.8	0.0	chr16	9004116	9004207	(81334138)	C	ORSL	DNA/hAT-Tip100	(143)	132	25	1410299
760	23.5	3.5	1.8	chr16	9004347	9004516	(81333829)	C	AluJb	SINE/Alu	(18)	294	122	1410301
2077	16.4	0.3	0.0	chr16	9004523	9004832	(81333513)	C	AluSx	SINE/Alu	(1)	311	1	1410302
21	22.1	5.3	1.3	chr16	9092842	9092916	(81245429)	+	(TTCT)n	Simple_repeat	1	79	(0)	1410577
546	21.5	7.3	12.0	chr16	9093154	9093370	(81244975)	+	MER20	DNA/hAT-Charlie	10	215	(4)	1410578
11320	10.7	2.6	0.7	chr16	9347351	9349585	(80988760)	C	L1MA3	LINE/L1	(3400)	4165	1885	1411166
6345	10.3	5.2	1.9	chr16	9349586	9350765	(80987580)	C	SVA_A	Retroposon/SVA	(3)	1384	395	1411167
16	14.8	0.0	4.9	chr16	11494436	11494476	(78843869)	+	A-rich	Low_complexity	1	41	(0)	1415816
206	22.4	17.7	0.0	chr16	11494819	11494925	(78843420)	C	MER5B	DNA/hAT-Charlie	(12)	166	37	1415817
239	33.0	17.4	4.9	chr16	11566128	11566275	(78772070)	+	L2c	LINE/L2	3198	3348	(27)	1415983
568	21.2	0.0	1.7	chr16	11566279	11566393	(78771952)	C	MER81	DNA/hAT-Blackjack	(0)	114	2	1415985
1579	14.1	0.8	3.7	chr16	11566482	11566750	(78771595)	+	AluJo	SINE/Alu	1	261	(51)	1415986
368	29.6	4.5	1.1	chr16	11640198	11640395	(78697950)	C	MIR3	SINE/MIR	(17)	245	39	1416182
2359	6.8	0.3	0.3	chr16	11714359	11714653	(78623692)	+	AluY	SINE/Alu	1	295	(16)	1416341
4381	23.7	7.2	5.7	chr16	14330032	14330444	(76007901)	+	L1MC5	LINE/L1	8553	8955	(349)	1421871
2205	10.1	0.0	0.0	chr16	14330445	14330741	(76007604)	+	AluSg4	SINE/Alu	2	298	(12)	1421876
1221	19.3	0.0	0.9	chr16	14976611	14976830	(75361515)	+	MER20	DNA/hAT-Charlie	2	219	(0)	1423353
1695	19.5	0.7	1.4	chr16	14985815	14986111	(75352234)	+	AluJr	SINE/Alu	1	295	(17)	1423375
2100	10.5	2.1	0.7	chr16	14986191	14986475	(75351870)	+	AluSx1	SINE/Alu	1	289	(23)	1423376
1861	20.0	4.4	1.0	chr16	16449584	16449977	(73888368)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1426845
1844	18.4	3.3	3.8	chr16	19132987	19133279	(71205066)	+	MLT1A0	LTR/ERVL-MaLR	1	305	(60)	1432776
2337	10.1	0.7	0.0	chr16	19133280	19133585	(71204760)	C	AluSx	SINE/Alu	(3)	309	2	1432777
36	0.0	0.0	0.0	chr16	19315859	19315889	(71022456)	+	(TG)n	Simple_repeat	1	31	(0)	1433250
876	27.1	14.4	0.7	chr16	19315962	19316254	(71022091)	+	LTR16B2	LTR/ERVL	1	340	(122)	1433251
626	20.6	12.2	5.9	chr16	19316269	19316521	(71021824)	+	L1ME3G	LINE/L1	654	924	(0)	1433252
2404	13.4	7.3	2.5	chr16	22296150	22296419	(68041926)	C	MSTC	LTR/ERVL-MaLR	(0)	428	166	1439783
28	5.8	0.0	0.0	chr16	22296420	22296455	(68041890)	+	(CCATTAAT)n	Simple_repeat	1	36	(0)	1439784
2404	13.4	7.3	2.5	chr16	22296456	22296589	(68041756)	C	MSTC	LTR/ERVL-MaLR	(263)	165	4	1439783
40	24.9	1.0	0.0	chr16	24895527	24895626	(65442719)	+	GA-rich	Low_complexity	1	101	(0)	1445771
197	19.2	3.7	7.1	chr16	25258549	25258604	(65079741)	C	L2a	LINE/L2	(24)	3402	3349	1446591
837	23.7	2.3	3.6	chr16	25258623	25258796	(65079549)	C	LTR73	LTR/ERV1	(18)	554	383	1446592
5286	8.5	1.8	5.4	chr16	25258797	25259581	(65078764)	C	MER4E1	LTR/ERV1	(0)	781	20	1446593
1008	28.4	8.7	2.3	chr16	27096887	27097006	(63241339)	C	LTR16E1	LTR/ERVL	(376)	162	23	1450352
2162	15.5	3.7	2.5	chr16	27097084	27097486	(63240859)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1450354
20	23.8	1.4	4.0	chr16	28554226	28554299	(61784046)	+	G-rich	Low_complexity	1	75	(0)	1453837
466	7.6	7.0	0.0	chr16	28554544	28554609	(61783736)	C	AluJo	SINE/Alu	(241)	71	1	1453838
195	26.7	12.2	1.9	chr16	28554618	28554720	(61783625)	+	L2	LINE/L2	1794	1908	(1511)	1453839
3715	5.9	1.6	0.0	chr16	29709677	29710181	(60628164)	C	LTR10D	LTR/ERV1	(0)	513	1	1456375
3407	14.2	2.1	1.9	chr16	29710182	29710490	(60627855)	+	HUERS-P3b-int	LTR/ERV1	269	581	(6837)	1456374
197	30.6	1.4	2.7	chr16	30084094	30084167	(60254178)	C	MIR3	SINE/MIR	(127)	81	9	1457230
30	25.3	2.6	4.2	chr16	30084196	30084311	(60254034)	+	(CA)n	Simple_repeat	1	119	(0)	1457231
22	6.8	8.3	1.9	chr16	30463220	30463267	(59875078)	+	(TTGT)n	Simple_repeat	1	52	(0)	1458110
989	15.4	0.0	1.8	chr16	30463302	30463466	(59874879)	+	MSTD	LTR/ERVL-MaLR	234	395	(1)	1458108
838	26.2	1.5	0.4	chr16	30463468	30463731	(59874614)	+	L1ME1	LINE/L1	5907	6173	(6)	1458106
3161	10.4	4.2	0.4	chr16	30535227	30535680	(59802665)	C	MER4A1	LTR/ERV1	(0)	472	1	1458294
273	26.7	0.0	0.0	chr16	30553364	30553423	(59784922)	+	MIR	SINE/MIR	81	140	(122)	1458321
217	27.0	0.0	0.0	chr16	30553692	30553754	(59784591)	+	MIRc	SINE/MIR	185	247	(21)	1458322
1258	31.3	6.0	5.2	chr16	30847826	30848291	(59490054)	+	ERVL-E-int	LTR/ERVL	813	1277	(4390)	1459007
414	20.0	4.3	2.6	chr16	30848428	30848540	(59489805)	+	ERVL-E-int	LTR/ERVL	1471	1585	(4082)	1459007
333	27.1	7.0	10.7	chr16	30921952	30922100	(59416245)	C	MIRb	SINE/MIR	(30)	238	96	1459204
200	22.9	10.3	0.0	chr16	30956563	30956623	(59381722)	C	MIRc	SINE/MIR	(120)	148	81	1459287
210	31.6	7.3	5.8	chr16	30956924	30957044	(59381301)	+	MIR1_Amn	SINE/MIR	31	153	(77)	1459288
1008	25.5	3.6	3.2	chr16	31026139	31026170	(59312175)	+	MIR	SINE/MIR	6	31	(231)	1459431
1818	17.3	0.3	2.8	chr16	31026171	31026488	(59311857)	+	AluJr	SINE/Alu	1	310	(2)	1459432
566	22.4	6.6	2.5	chr16	31071893	31072052	(59266293)	+	MLT1B	LTR/ERVL-MaLR	3	169	(221)	1459559
193	32.0	15.9	2.2	chr16	31072717	31072895	(59265450)	+	L2c	LINE/L2	2911	3118	(269)	1459560
413	30.4	8.1	1.5	chr16	31179120	31179316	(59159029)	+	MIRb	SINE/MIR	25	235	(33)	1459793
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
280	26.9	10.5	0.7	chr16	46748625	46748770	(43589575)	C	MamTip1	DNA/hAT-Tip100	(0)	267	106	1465949
2764	17.2	6.7	8.1	chr16	46789662	46789893	(43548452)	+	L1MA8	LINE/L1	3276	3497	(3229)	1466047
1623	14.5	0.0	5.3	chr16	46818689	46818843	(43519502)	C	AluJb	SINE/Alu	(14)	298	150	1466091
1821	9.5	10.9	12.7	chr16	46818844	46819228	(43519117)	+	MER51B	LTR/ERV1	1	377	(0)	1466092
59	17.5	0.0	0.0	chr16	46830234	46830343	(43508002)	+	GA-rich	Low_complexity	1	110	(0)	1466113
14	23.2	5.3	1.7	chr16	47461027	47461083	(42877262)	+	(GCC)n	Simple_repeat	1	60	(0)	1467211
17	5.0	0.0	0.0	chr16	48164767	48164787	(42173558)	+	(AT)n	Simple_repeat	1	21	(0)	1468240
15	31.8	0.0	0.0	chr16	48554165	48554218	(41784127)	+	A-rich	Low_complexity	1	54	(0)	1469012
320	29.4	9.5	2.5	chr16	49836567	49836723	(40501622)	+	MIR	SINE/MIR	84	252	(10)	1471210
311	32.0	3.7	3.7	chr16	50960941	50961102	(39377243)	C	MIRb	SINE/MIR	(30)	238	77	1473484
302	15.8	6.2	3.8	chr16	51887521	51887599	(38450746)	+	L1ME4b	LINE/L1	599	679	(213)	1475132
232	27.3	4.8	9.7	chr16	51887628	51887781	(38450564)	+	L1ME4b	LINE/L1	736	881	(11)	1475132
1772	31.5	15.5	2.1	chr16	53280751	53282049	(37056296)	+	L2a	LINE/L2	1886	3384	(3)	1477578
16	11.7	5.1	2.4	chr16	53434429	53434486	(36903859)	+	(GGCG)n	Simple_repeat	1	59	(0)	1477844
14	22.5	0.0	0.0	chr16	53434604	53434654	(36903691)	+	GA-rich	Low_complexity	1	51	(0)	1477845
33	17.4	1.4	1.4	chr16	55731831	55731903	(34606442)	+	(TCTCTC)n	Simple_repeat	1	74	(0)	1481883
232	31.3	2.9	0.0	chr16	55731905	55731971	(34606374)	C	L2b	LINE/L2	(1)	3374	3306	1481884
225	27.7	9.7	0.0	chr16	55732425	55732489	(34605856)	+	MER58C	DNA/hAT-Charlie	12	83	(132)	1481885
1348	11.2	0.5	0.0	chr16	56603399	56603585	(33734760)	+	AluSp	SINE/Alu	124	311	(2)	1483398
1365	23.9	6.1	0.0	chr16	56603598	56603969	(33734376)	+	MLT1F2	LTR/ERVL-MaLR	165	560	(0)	1483395
246	26.8	6.6	1.4	chr16	56604132	56604203	(33734142)	C	L3	LINE/CR1	(131)	3968	3893	1483399
1928	14.5	0.3	4.4	chr16	56604204	56604520	(33733825)	+	AluJo	SINE/Alu	1	304	(8)	1483400
183	27.5	2.4	0.0	chr16	57383681	57383720	(32954625)	+	MIR3	SINE/MIR	37	77	(131)	1484976
2317	9.3	1.3	2.6	chr16	57700367	57700679	(32637666)	+	AluSg	SINE/Alu	1	309	(1)	1485608
4811	9.0	0.0	1.8	chr16	57700680	57701253	(32637092)	C	LTR71B	LTR/ERV1	(36)	574	1	1485607
12	18.8	2.6	2.6	chr16	58129651	58129688	(32208657)	+	(ACGTG)n	Simple_repeat	1	39	(0)	1486505
371	24.1	0.0	0.0	chr16	58129891	58129973	(32208372)	+	L1M5	LINE/L1	2968	3050	(3096)	1486506
2086	11.9	0.0	0.3	chr16	58129979	58130272	(32208073)	+	AluJb	SINE/Alu	1	293	(19)	1486507
1521	16.3	1.1	8.6	chr16	58573971	58574271	(31764074)	+	AluJo	SINE/Alu	3	280	(32)	1487352
2055	19.5	5.6	5.8	chr16	58574272	58574454	(31763891)	+	L1M4	LINE/L1	5311	5498	(1146)	1487339
12	11.2	6.7	0.0	chr16	58756341	58756370	(31581975)	+	(TATGTG)n	Simple_repeat	1	32	(0)	1487791
295	27.1	8.3	2.9	chr16	66217365	66217501	(24120844)	C	MIRb	SINE/MIR	(119)	149	5	1499304
724	28.6	5.0	1.6	chr16	66217683	66217934	(24120411)	+	MIR	SINE/MIR	2	262	(0)	1499305
313	25.6	1.1	3.4	chr16	66869589	66869677	(23468668)	C	MIR1_Amn	SINE/MIR	(79)	151	65	1500587
2166	13.9	0.7	0.0	chr16	66978027	66978336	(23360009)	C	AluSz6	SINE/Alu	(0)	312	1	1500800
233	38.9	11.7	0.9	chr16	67917934	67918146	(22420199)	+	L3	LINE/CR1	3857	4095	(4)	1502598
183	31.4	8.7	2.8	chr16	68020140	68020247	(22318098)	+	MER5B	DNA/hAT-Charlie	2	116	(62)	1502770
19	15.8	2.8	0.0	chr16	68085887	68085922	(22252423)	+	(TG)n	Simple_repeat	1	37	(0)	1502904
2188	9.3	0.0	0.0	chr16	69082465	69082755	(21255590)	+	AluSc	SINE/Alu	1	291	(18)	1505053
20	4.3	0.0	0.0	chr16	69083093	69083116	(21255229)	+	(T)n	Simple_repeat	1	24	(0)	1505054
1509	14.5	0.8	0.4	chr16	69083125	69083358	(21254987)	C	AluJb	SINE/Alu	(77)	235	1	1505055
288	25.8	11.8	5.4	chr16	69441454	69441482	(20896863)	C	L1ME3	LINE/L1	(687)	5613	5589	1505815
396	32.2	2.0	3.3	chr16	69527437	69527587	(20810758)	+	MIRb	SINE/MIR	50	198	(70)	1506001
996	15.9	1.2	3.5	chr16	69527589	69527758	(20810587)	+	FRAM	SINE/Alu	1	166	(10)	1506002
1226	18.8	0.0	0.9	chr16	70064146	70064365	(20273980)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1507159
877	23.8	5.2	1.0	chr16	70101993	70102196	(20236149)	+	MER58A	DNA/hAT-Charlie	12	224	(0)	1507231
439	25.7	2.0	2.6	chr16	70102249	70102400	(20235945)	+	L1ME4b	LINE/L1	355	505	(387)	1507232
459	23.3	0.0	0.0	chr16	71251649	71251738	(19086607)	+	MER81	DNA/hAT-Blackjack	2	91	(23)	1509343
221	30.8	10.3	5.8	chr16	71483722	71483859	(18854486)	C	L2b	LINE/L2	(1)	3374	3230	1509764
375	30.1	3.1	0.8	chr16	71484168	71484291	(18854054)	+	L2b	LINE/L2	3228	3354	(21)	1509763
1133	26.3	9.5	0.8	chr16	71826605	71827060	(18511285)	C	L2a	LINE/L2	(60)	3366	2861	1510465
2281	12.0	0.0	0.3	chr16	71827061	71827368	(18510977)	+	AluSx1	SINE/Alu	1	307	(5)	1510466
4885	14.7	3.8	2.1	chr16	71912600	71913484	(18424861)	C	L1MB2	LINE/L1	(4)	6167	5268	1510631
864	19.0	8.4	10.1	chr16	72399963	72400348	(17937997)	+	Charlie2b	DNA/hAT-Charlie	1932	2310	(472)	1511411
313	19.2	8.0	8.8	chr16	72400349	72400462	(17937883)	C	MER119	DNA/hAT-Charlie	(2)	581	469	1511412
630	21.3	5.2	2.3	chr16	72400449	72400578	(17937767)	C	MER119	DNA/hAT-Charlie	(449)	134	1	1511412
505	11.3	0.0	0.0	chr16	74594738	74594808	(15743537)	C	AluYj4	SINE/Alu	(10)	301	231	1515002
1908	14.3	0.0	1.4	chr16	75471366	75471651	(14866694)	C	AluSz6	SINE/Alu	(8)	304	23	1516868
232	29.9	4.8	3.7	chr16	75472009	75472171	(14866174)	+	L1M5	LINE/L1	5003	5167	(979)	1516869
971	5.6	6.0	0.0	chr16	78045550	78045674	(12292671)	C	AluSz6	SINE/Alu	(6)	306	174	1521014
7445	8.4	1.8	0.4	chr16	81812349	81813565	(8524780)	C	L1PA7	LINE/L1	(669)	5485	4256	1528099
357	28.0	5.9	5.2	chr16	81813580	81813807	(8524538)	C	MLT1H1	LTR/ERVL-MaLR	(79)	476	213	1528101
254	22.4	0.0	0.0	chr16	81813783	81813831	(8524514)	C	MLT1H1	LTR/ERVL-MaLR	(316)	275	227	1528101
899	28.8	13.9	2.1	chr16	81830968	81831346	(8506999)	+	L2a	LINE/L2	2996	3426	(0)	1528152
363	26.9	3.7	7.8	chr16	81831381	81831521	(8506824)	C	MIRb	SINE/MIR	(1)	267	133	1528153
305	22.7	2.6	1.3	chr16	84357215	84357290	(5981055)	C	L1MC4a	LINE/L1	(67)	7815	7739	1532677
331	16.4	2.4	6.1	chr16	84357314	84357406	(5980939)	C	MER2	DNA/TcMar-Tigger	(0)	345	268	1532678
709	24.2	11.0	0.4	chr16	84357455	84357682	(5980663)	C	L1MD2	LINE/L1	(216)	6143	5889	1532679
383	28.9	4.3	5.6	chr16	84829738	84829880	(5508465)	+	MIRb	SINE/MIR	89	229	(39)	1533654
2040	9.8	1.7	1.4	chr16	85012100	85012395	(5325950)	+	AluSz	SINE/Alu	1	297	(15)	1534009
13	11.8	7.7	2.4	chr16	85238539	85238577	(5099768)	+	(CTCTG)n	Simple_repeat	1	42	(0)	1534462
258	19.2	5.5	0.0	chr16	85238839	85238890	(5099455)	C	L2b	LINE/L2	(2)	3373	3319	1534463
605	27.9	7.8	0.5	chr16	85438475	85438665	(4899680)	C	MIR	SINE/MIR	(43)	219	14	1534842
300	32.0	14.0	1.7	chr16	86335659	86335890	(4002455)	+	L2a	LINE/L2	3151	3415	(11)	1536468
26	0.0	0.0	0.0	chr16	86335895	86335919	(4002426)	+	(AATG)n	Simple_repeat	1	25	(0)	1536469
15	28.6	0.0	6.5	chr16	86336280	86336356	(4001989)	+	(TCCC)n	Simple_repeat	1	77	(0)	1536470
415	31.4	7.0	4.0	chr16	86596233	86596454	(3741891)	+	MIRb	SINE/MIR	16	244	(24)	1536902
672	27.9	1.6	0.0	chr16	86596465	86596654	(3741691)	C	MIR	SINE/MIR	(48)	214	22	1536903
2739	27.1	7.0	6.8	chr16	87475581	87476793	(2861552)	+	L1ME2z	LINE/L1	928	2082	(4160)	1538482
14	21.8	0.0	0.0	chr16	87855005	87855041	(2483304)	+	(GGCCAG)n	Simple_repeat	1	37	(0)	1539175
789	12.4	8.6	0.8	chr16	88662571	88662699	(1675646)	C	AluJb	SINE/Alu	(30)	282	143	1540286
186	23.4	0.0	7.8	chr16	88662872	88662922	(1675423)	+	MIR3	SINE/MIR	109	155	(53)	1540287
12	21.7	0.0	4.9	chr16	88662960	88663000	(1675345)	+	(CCCGG)n	Simple_repeat	1	41	(0)	1540288
286	24.2	0.0	0.0	chr16	88812033	88812098	(1526247)	C	Kanga1d	DNA/TcMar-Tc2	(0)	609	544	1540480
1160	21.6	0.7	3.8	chr16	89363782	89364068	(974277)	+	AluJr	SINE/Alu	9	286	(26)	1541143
16	5.2	0.0	0.0	chr16	89364069	89364088	(974257)	+	(CA)n	Simple_repeat	1	20	(0)	1541144
434	18.6	16.2	0.7	chr16	89364266	89364406	(973939)	+	MLT1H2	LTR/ERVL-MaLR	323	489	(0)	1541145
568	28.2	12.6	0.5	chr17	222157	222352	(83035089)	C	MIR	SINE/MIR	(38)	224	2	1544824
1451	20.8	11.5	1.6	chr17	501273	501639	(82755802)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1545272
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
435	13.8	2.7	7.6	chr17	721457	721574	(82535867)	C	MER20B	DNA/hAT-Charlie	(641)	142	31	1545670
2405	7.1	0.0	0.0	chr17	1220010	1220303	(82037138)	+	AluY	SINE/Alu	1	294	(17)	1546600
2448	6.9	0.0	0.0	chr17	1315179	1315468	(81941973)	+	AluSc	SINE/Alu	1	290	(19)	1546825
14	28.2	0.0	4.6	chr17	1315551	1315615	(81941826)	+	(GCTCTG)n	Simple_repeat	1	65	(0)	1546826
2148	13.6	1.3	1.0	chr17	1630490	1630799	(81626642)	C	AluJo	SINE/Alu	(0)	312	2	1547496
668	31.5	11.1	4.6	chr17	2872259	2872671	(80384770)	C	MER65A	LTR/ERV1	(2)	443	1	1550144
1306	15.9	10.8	0.4	chr17	2872695	2872926	(80384515)	C	AluJo	SINE/Alu	(16)	296	38	1550145
237	38.1	0.0	0.7	chr17	3712169	3712316	(79545125)	+	L1M6B	LINE/L1	74	220	(149)	1551563
625	33.3	9.0	4.7	chr17	3712528	3712661	(79544780)	+	L1M5	LINE/L1	4129	4279	(1867)	1551564
1698	23.6	3.1	6.0	chr17	4459733	4460260	(78797181)	C	L2a	LINE/L2	(60)	3366	2863	1553139
16	19.6	5.6	1.8	chr17	4710664	4710717	(78546724)	+	(AGCG)n	Simple_repeat	1	57	(0)	1553589
12	19.7	2.3	4.4	chr17	4710763	4710806	(78546635)	+	G-rich	Low_complexity	1	45	(0)	1553590
2513	5.7	0.0	1.0	chr17	5249278	5249576	(78007865)	+	AluSg	SINE/Alu	4	299	(11)	1554731
232	3.6	0.0	0.0	chr17	5249801	5249828	(78007613)	+	L1MB3	LINE/L1	5446	5473	(698)	1554732
22	3.9	0.0	0.0	chr17	5249830	5249856	(78007585)	+	(AC)n	Simple_repeat	1	27	(0)	1554733
47	6.6	1.6	0.0	chr17	5249856	5249919	(78007522)	+	(AG)n	Simple_repeat	1	65	(0)	1554734
2439	15.4	1.9	4.7	chr17	5249925	5250192	(78007249)	+	L1MB3	LINE/L1	5527	5789	(394)	1554732
2376	8.8	0.0	0.0	chr17	5250193	5250488	(78006953)	+	AluSx1	SINE/Alu	1	296	(16)	1554735
25910	5.1	0.6	0.1	chr17	5574963	5579269	(77678172)	+	L1PA5	LINE/L1	1838	6152	(2)	1555393
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
246	30.1	6.5	5.3	chr17	6568465	6568615	(76688826)	C	MIR3	SINE/MIR	(54)	154	2	1557337
2366	9.2	0.3	0.7	chr17	6987009	6987314	(76270127)	C	AluSp	SINE/Alu	(8)	305	1	1558041
623	18.1	6.6	8.8	chr17	6987315	6987434	(76270007)	C	MER106A	DNA/hAT-Charlie	(47)	189	68	1558040
659	14.9	0.0	0.0	chr17	6987465	6987558	(76269883)	+	5S	rRNA	1	94	(27)	1558042
1060	29.9	9.4	7.7	chr17	7164686	7164973	(76092468)	C	L1ME5	LINE/L1	(585)	5609	5294	1558362
487	34.4	5.2	3.6	chr17	7164966	7164989	(76092452)	C	L1M3	LINE/L1	(942)	5201	5174	1558367
1201	22.4	19.4	1.4	chr17	7164990	7165410	(76092031)	+	LTR33	LTR/ERVL	1	515	(0)	1558368
232	30.5	3.6	9.9	chr17	7548612	7548822	(75708619)	+	MER21A	LTR/ERVL	114	310	(621)	1559064
434	29.1	11.2	2.5	chr17	8376267	8376428	(74881013)	+	MIR	SINE/MIR	46	223	(39)	1560688
1069	14.7	2.6	0.0	chr17	8728307	8728490	(74528951)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1561344
52	3.7	0.0	0.0	chr17	8746832	8746887	(74510554)	+	(TTCCC)n	Simple_repeat	1	56	(0)	1561385
360	36.2	5.8	1.5	chr17	8746902	8747165	(74510276)	+	L1M5	LINE/L1	4497	4772	(1374)	1561386
7939	17.2	3.6	4.3	chr17	9563777	9564925	(73692516)	+	L1PA13	LINE/L1	3663	4711	(1435)	1562952
395	30.8	6.5	3.0	chr17	12680308	12680471	(70576970)	C	MIRb	SINE/MIR	(75)	193	24	1568480
1540	30.0	10.1	3.5	chr17	12909134	12910162	(70347279)	+	L1MEd	LINE/L1	527	1631	(5472)	1568876
15128	8.3	3.1	0.1	chr17	15203896	15206942	(68050499)	+	L1PA10	LINE/L1	3343	6479	(4)	1572687
448	24.5	7.3	2.8	chr17	16204724	16204866	(67052575)	C	MIR	SINE/MIR	(59)	203	54	1574405
2240	12.1	0.3	0.0	chr17	16204939	16205245	(67052196)	+	AluSp	SINE/Alu	1	308	(5)	1574411
3128	12.1	2.5	0.4	chr17	16364359	16364824	(66892617)	C	MER31A	LTR/ERV1	(9)	476	1	1574806
980	22.3	0.0	0.0	chr17	19395761	19395935	(63861506)	C	AluJb	SINE/Alu	(1)	311	137	1580523
3665	18.1	10.9	14.0	chr17	19395939	19396217	(63861224)	C	L1MC2	LINE/L1	(4744)	1889	1660	1580520
2406	6.7	0.0	5.4	chr17	19396218	19396533	(63860908)	C	AluY	SINE/Alu	(11)	300	2	1580524
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
1353	18.0	1.6	0.8	chr17	21058171	21058415	(62199026)	C	AluJo	SINE/Alu	(2)	310	64	1583553
702	24.5	6.5	4.0	chr17	21058448	21058672	(62198769)	C	LTR107_Mam	LTR	(337)	233	3	1583547
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
527	36.5	1.1	9.1	chr17	27215361	27215743	(56041698)	+	L2b	LINE/L2	3010	3361	(14)	1586296
386	26.6	2.8	5.5	chr17	27369360	27369470	(55887971)	C	L1MEf	LINE/L1	(4182)	2018	1913	1586643
1379	14.9	0.8	11.7	chr17	27369471	27369752	(55887689)	+	AluJb	SINE/Alu	37	287	(25)	1586644
386	26.6	2.8	5.5	chr17	27369753	27369823	(55887618)	C	L1MEf	LINE/L1	(4288)	1912	1842	1586643
198	21.8	10.3	1.3	chr17	27654461	27654539	(55602902)	+	MIR3	SINE/MIR	64	150	(58)	1587206
512	27.8	4.9	0.6	chr17	27654920	27655093	(55602348)	C	MIR	SINE/MIR	(70)	192	11	1587207
5535	15.6	9.1	4.8	chr17	27686099	27687307	(55570134)	C	MER11A	LTR/ERVK	(0)	1266	1	1587250
389	22.7	1.1	0.0	chr17	29149231	29149318	(54108123)	+	L2a	LINE/L2	3338	3426	(0)	1589978
7901	17.9	3.0	2.7	chr17	29958167	29960420	(53297021)	C	L1M1	LINE/L1	(4935)	2630	13	1591678
789	22.1	1.1	10.1	chr17	30092207	30092396	(53165045)	C	L1ME3A	LINE/L1	(23)	6219	5986	1591901
2534	7.5	0.0	0.3	chr17	30092397	30092688	(53164753)	C	AluSq2	SINE/Alu	(22)	291	1	1591902
18	25.5	1.6	3.1	chr17	30600796	30600859	(52656582)	+	(CCG)n	Simple_repeat	1	65	(0)	1592819
5099	12.4	3.4	0.0	chr17	30981399	30982188	(52275253)	C	L1MB4	LINE/L1	(5272)	2293	1476	1593737
2721	16.3	5.5	2.1	chr17	30982167	30982698	(52274743)	C	L1MB4	LINE/L1	(7004)	561	11	1593737
18	19.1	3.7	7.1	chr17	32486611	32486692	(50770749)	+	(GGCG)n	Simple_repeat	1	85	(0)	1596915
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
470	29.6	11.8	1.6	chr17	34503363	34503551	(48753890)	C	MIRb	SINE/MIR	(56)	212	2	1600523
25	21.1	5.3	0.0	chr17	34980634	34980709	(48276732)	+	(CGCGG)n	Simple_repeat	1	80	(0)	1601461
13	11.0	0.0	6.1	chr17	34996323	34996355	(48261086)	+	(TGTTTT)n	Simple_repeat	1	33	(0)	1601489
7321	20.1	14.5	4.4	chr17	35466433	35467668	(47789773)	+	HERVL74-int	LTR/ERVL	1983	3340	(2345)	1602249
186	29.7	8.6	4.5	chr17	35568569	35568635	(47688806)	C	L2a	LINE/L2	(2)	3424	3355	1602412
21	31.6	1.4	0.0	chr17	35895502	35895575	(47361866)	+	(CATC)n	Simple_repeat	1	75	(0)	1603033
209	30.5	3.7	7.9	chr17	35895585	35895698	(47361743)	C	L2b	LINE/L2	(3)	3423	3303	1603034
585	29.7	4.3	1.3	chr17	36131698	36131922	(47125519)	+	LTR79	LTR/ERVL	288	519	(8)	1603439
920	34.5	3.5	2.6	chr17	36131939	36132358	(47125083)	+	ERVL-B4-int	LTR/ERVL	2365	2788	(2879)	1603440
1284	15.6	14.9	0.0	chr17	36535656	36535911	(46721530)	C	AluJr	SINE/Alu	(10)	302	2	1604120
1036	25.0	14.9	12.2	chr17	37014549	37015197	(46242244)	C	HAL1	LINE/L1	(1027)	1480	766	1605105
1899	17.3	5.3	1.1	chr17	37015297	37015675	(46241766)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	1	1605110
214	27.3	6.5	3.9	chr17	37491044	37491159	(45766282)	+	MIR3	SINE/MIR	58	179	(51)	1605977
2365	6.2	3.0	0.0	chr17	38296519	38296808	(44960633)	C	AluSx	SINE/Alu	(13)	299	1	1607582
842	20.7	0.7	0.0	chr17	38414548	38414692	(44842749)	C	FRAM	SINE/Alu	(30)	146	1	1607816
23	5.5	5.3	0.0	chr17	40423407	40423444	(42833997)	+	(TTTA)n	Simple_repeat	1	40	(0)	1612011
312	28.4	10.3	6.2	chr17	40423628	40423771	(42833670)	+	L1ME4b	LINE/L1	334	463	(429)	1612012
346	28.5	5.1	3.5	chr17	41504019	41504184	(41753257)	+	MIR3	SINE/MIR	34	196	(12)	1613720
240	27.5	8.6	9.2	chr17	41659330	41659585	(41597856)	C	L2b	LINE/L2	(18)	3369	3139	1613972
454	16.5	0.0	0.0	chr17	41659612	41659696	(41597745)	C	L1ME3A	LINE/L1	(34)	6139	6055	1613973
261	20.3	6.3	0.0	chr17	41666441	41666514	(41590927)	C	MIR3	SINE/MIR	(52)	156	78	1613990
676	31.6	11.1	2.5	chr17	41683600	41684069	(41573372)	C	MamGypLTR1a	LTR/Gypsy	(19)	765	254	1614042
379	30.2	10.7	0.0	chr17	41684107	41684306	(41573135)	C	MIRb	SINE/MIR	(30)	238	6	1614043
1789	17.2	0.0	0.0	chr17	41694853	41695149	(41562292)	+	AluSz6	SINE/Alu	1	297	(15)	1614064
180	32.2	8.0	3.4	chr17	41695304	41695422	(41562019)	C	L2c	LINE/L2	(6)	3381	3257	1614065
1145	9.3	0.0	0.0	chr17	41695607	41695757	(41561684)	+	AluSx1	SINE/Alu	6	156	(156)	1614066
990	10.7	0.0	1.0	chr17	43214069	43214208	(40043233)	+	AluJb	SINE/Alu	1	166	(0)	1617319
17657	25.6	1.5	1.4	chr17	43325134	43331647	(39925794)	C	HERVK13-int	LTR/ERVK	(0)	8116	1070	1617608
31	0.0	0.0	0.0	chr17	43530610	43530636	(39726805)	+	(GT)n	Simple_repeat	1	27	(0)	1618040
2114	10.4	0.0	7.0	chr17	44316819	44317145	(38940296)	C	AluSx1	SINE/Alu	(8)	304	1	1619680
53	15.0	4.5	0.0	chr17	45197575	45197685	(38059756)	+	GA-rich	Low_complexity	1	116	(0)	1621570
13	0.0	0.0	0.0	chr17	45198255	45198271	(38059170)	+	(TTA)n	Simple_repeat	1	17	(0)	1621571
484	21.2	4.3	0.0	chr17	45198272	45198403	(38059038)	C	L1MC4	LINE/L1	(0)	8042	7905	1621572
339	30.4	16.1	1.8	chr17	45418596	45419097	(37838344)	+	L1MEj	LINE/L1	5	592	(1568)	1622012
448	27.3	16.9	0.5	chr17	45949479	45949695	(37307746)	+	MIR	SINE/MIR	1	260	(2)	1623101
2624	11.8	1.1	0.8	chr17	47269836	47270209	(35987232)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1625697
270	16.4	13.1	5.2	chr17	47649051	47649127	(35608314)	+	MIR3	SINE/MIR	39	122	(86)	1626486
394	27.1	1.6	0.0	chr17	47649133	47649257	(35608184)	+	MIR3	SINE/MIR	61	182	(26)	1626487
357	20.8	27.3	1.7	chr17	47942044	47942219	(35315222)	+	MIR	SINE/MIR	10	247	(15)	1626990
219	23.6	5.2	0.0	chr17	47942205	47942259	(35315182)	C	MIR	SINE/MIR	(148)	114	57	1626991
24	27.0	1.2	2.4	chr17	48578022	48578104	(34679337)	+	(CGG)n	Simple_repeat	1	84	(0)	1628113
14	31.1	0.0	0.0	chr17	48578129	48578183	(34679258)	+	(CGCTGCA)n	Simple_repeat	1	55	(0)	1628114
1742	16.8	2.8	3.8	chr17	48662968	48663083	(34594358)	C	AluJr	SINE/Alu	(197)	115	1	1628216
618	17.3	0.6	10.8	chr17	48663084	48663269	(34594172)	C	LTR52-int	LTR/ERVL	(2736)	820	655	1628206
2134	22.2	1.0	1.0	chr17	48663294	48663786	(34593655)	C	LTR52-int	LTR/ERVL	(3030)	526	1	1628206
1505	11.0	18.0	2.0	chr17	48972023	48972268	(34285173)	+	AluSx4	SINE/Alu	1	294	(16)	1628949
16	14.2	0.0	0.0	chr17	48972489	48972519	(34284922)	+	(CACCCC)n	Simple_repeat	1	31	(0)	1628950
20	0.0	0.0	0.0	chr17	49055837	49055858	(34201583)	+	(T)n	Simple_repeat	1	22	(0)	1629106
437	28.8	10.5	5.8	chr17	49247967	49248413	(34009028)	C	L2b	LINE/L2	(3)	3372	2814	1629524
2224	11.7	0.0	1.6	chr17	49248417	49248732	(34008709)	C	AluSx1	SINE/Alu	(1)	311	1	1629525
2044	16.6	1.3	0.0	chr17	49988643	49988950	(33268491)	C	AluJb	SINE/Alu	(0)	312	1	1630941
60	0.0	0.0	0.0	chr17	49989004	49989054	(33268387)	+	(TG)n	Simple_repeat	1	51	(0)	1630942
426	15.6	0.0	2.6	chr17	50478263	50478339	(32779102)	+	AluJr4	SINE/Alu	144	218	(94)	1631861
186	31.6	10.6	0.0	chr17	50478547	50478622	(32778819)	+	L2b	LINE/L2	3290	3374	(1)	1631862
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
189	29.7	8.4	15.6	chr17	50547442	50547788	(32709653)	+	L2c	LINE/L2	3056	3387	(0)	1632014
2363	9.6	0.0	0.0	chr17	51152248	51152559	(32104882)	C	AluSx1	SINE/Alu	(0)	312	1	1633247
1081	18.3	7.5	2.4	chr17	51152560	51152854	(32104587)	C	L1MD2	LINE/L1	(979)	5167	4864	1633241
410	26.1	35.9	3.5	chr17	51152991	51153250	(32104191)	+	L2a	LINE/L2	3069	3416	(10)	1633248
423	32.1	9.8	4.9	chr17	51355596	51355798	(31901643)	C	MIRb	SINE/MIR	(54)	214	1	1633618
1995	13.4	0.0	0.0	chr17	51540903	51541177	(31716264)	C	AluSz	SINE/Alu	(37)	275	1	1633976
1921	17.8	7.7	4.1	chr17	51541178	51541299	(31716142)	C	L1MB3	LINE/L1	(361)	5822	5696	1633974
13899	16.0	2.1	4.1	chr17	53031475	53033752	(30223689)	C	L1MA3	LINE/L1	(4222)	3343	1099	1636208
14157	17.4	2.9	2.6	chr17	54031055	54032531	(29224910)	+	L1MA3	LINE/L1	1079	2588	(4977)	1637545
455	31.0	2.7	0.7	chr17	56397762	56397904	(26859537)	+	MIR3	SINE/MIR	15	160	(48)	1641218
11	11.2	6.9	0.0	chr17	57863124	57863152	(25394289)	+	(GTGGCT)n	Simple_repeat	1	31	(0)	1644000
15	19.1	5.3	3.3	chr17	58084143	58084199	(25173242)	+	(GGCC)n	Simple_repeat	1	60	(0)	1644418
1348	18.8	7.4	6.5	chr17	58101598	58101993	(25155448)	C	MLT1A0	LTR/ERVL-MaLR	(0)	408	19	1644444
233	15.7	1.3	0.0	chr17	58102006	58102058	(25155383)	C	L1MD2	LINE/L1	(2063)	4256	4202	1644438
875	14.5	0.0	0.0	chr17	58102061	58102177	(25155264)	C	AluJr	SINE/Alu	(194)	118	2	1644445
2235	18.2	2.2	0.5	chr17	58159238	58159634	(25097807)	+	MLT1A1	LTR/ERVL-MaLR	5	408	(0)	1644559
1242	25.7	7.3	3.6	chr17	58750994	58751441	(24506000)	C	LTR33A_	LTR/ERVL	(65)	466	1	1645688
225	12.5	0.0	0.0	chr17	58751461	58751500	(24505941)	C	L1ME2	LINE/L1	(2)	6177	6138	1645689
14	25.6	0.0	0.0	chr17	59247983	59248024	(24009417)	+	(TATATA)n	Simple_repeat	1	42	(0)	1646792
253	23.4	8.3	1.3	chr17	59248035	59248112	(24009329)	C	L1ME4c	LINE/L1	(394)	436	353	1646788
305	23.5	0.0	0.0	chr17	59248117	59248167	(24009274)	+	7SLRNA	srpRNA	1	51	(269)	1646793
556	24.2	0.0	0.0	chr17	59248207	59248301	(24009140)	+	AluJb	SINE/Alu	191	285	(27)	1646794
30	0.0	0.0	0.0	chr17	59248303	59248331	(24009110)	+	(ATAAA)n	Simple_repeat	1	29	(0)	1646795
818	30.0	4.6	1.1	chr17	60335359	60335631	(22921810)	C	MLT1J-int	LTR/ERVL-MaLR	(32)	1355	1073	1649026
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
1444	20.6	5.0	0.6	chr17	60392951	60393292	(22864149)	C	L1MB3	LINE/L1	(3)	6180	5823	1649145
12365	14.1	13.3	8.1	chr17	60528830	60530371	(22727070)	+	L1M1	LINE/L1	878	2353	(5212)	1649451
4026	10.1	5.5	0.3	chr17	60640868	60641719	(22615722)	C	L1PA16	LINE/L1	(278)	5888	4995	1649728
511	25.9	4.0	2.7	chr17	60641815	60641961	(22615480)	C	LTR41C	LTR/ERVL	(432)	269	121	1649729
12	18.5	0.0	7.1	chr17	61399273	61399314	(21858127)	+	(CGCC)n	Simple_repeat	1	42	(0)	1651001
4046	20.6	2.3	2.3	chr17	61634926	61636167	(21621274)	C	L1MA4	LINE/L1	(4459)	3106	1864	1651367
2595	18.3	2.3	1.3	chr17	61636172	61636720	(21620721)	C	L1M2	LINE/L1	(1188)	4955	4401	1651369
2086	14.0	3.8	2.9	chr17	62145619	62145904	(21111537)	C	L1MB3	LINE/L1	(864)	5282	4985	1652357
584	25.4	9.3	3.9	chr17	62145905	62146331	(21111110)	+	L2a	LINE/L2	2808	3302	(124)	1652354
2120	11.9	0.0	5.3	chr17	62417157	62417476	(20839965)	+	AluSx	SINE/Alu	2	304	(8)	1652915
51	0.0	0.0	0.0	chr17	62820820	62820863	(20436578)	+	(GT)n	Simple_repeat	1	44	(0)	1653748
266	22.7	10.2	8.5	chr17	62889739	62889844	(20367597)	+	LTR16C	LTR/ERVL	134	241	(248)	1653890
2243	10.1	0.0	0.3	chr17	62890076	62890400	(20367041)	C	AluSx	SINE/Alu	(0)	312	1	1653891
373	34.1	12.2	4.6	chr17	63110158	63110404	(20147037)	C	L3	LINE/CR1	(1397)	2702	2427	1654258
1789	19.9	3.9	1.8	chr17	63110405	63110803	(20146638)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1654259
373	34.1	12.2	4.6	chr17	63110804	63110835	(20146606)	C	L3	LINE/CR1	(1673)	2426	2399	1654258
190	32.1	4.5	2.3	chr17	63919593	63919678	(19337763)	C	MIR3	SINE/MIR	(10)	198	111	1655582
2375	9.8	0.0	0.0	chr17	64604665	64604961	(18652480)	+	AluSg	SINE/Alu	2	298	(12)	1656886
428	29.1	1.4	1.4	chr17	65066966	65067108	(18190333)	C	MER115	DNA/hAT-Tip100	(290)	403	261	1657879
438	26.5	3.8	0.0	chr17	65067217	65067318	(18190123)	C	MER115	DNA/hAT-Tip100	(587)	106	1	1657879
314	10.0	9.1	0.0	chr17	65100357	65100416	(18157025)	+	MADE1	DNA/TcMar-Mariner	1	66	(14)	1657970
50	23.1	0.8	0.8	chr17	65100533	65100655	(18156786)	+	(TCC)n	Simple_repeat	1	124	(0)	1657971
14	13.7	0.0	5.6	chr17	65100844	65100879	(18156562)	+	(CCCGC)n	Simple_repeat	1	36	(0)	1657972
258	25.7	6.3	0.0	chr17	65485734	65485807	(17771634)	+	L2a	LINE/L2	3334	3412	(14)	1658770
190	20.0	3.8	7.4	chr17	65485775	65485828	(17771613)	C	Tigger19b	DNA/TcMar-Tigger	(349)	201	150	1658771
15	9.7	0.0	0.0	chr17	65554911	65554932	(17702509)	+	(TG)n	Simple_repeat	1	22	(0)	1658885
222	20.8	0.0	0.0	chr17	66365402	66365449	(16891992)	C	MIRb	SINE/MIR	(38)	230	183	1660160
913	26.0	7.9	7.7	chr17	66614863	66615367	(16642074)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	5	1660543
2968	30.4	6.8	7.8	chr17	67326507	67326845	(15930596)	C	HERV16-int	LTR/ERVL	(3546)	1450	1107	1661801
7028	7.8	4.7	0.3	chr17	67326846	67327771	(15929670)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	1661808
1329	23.8	10.0	11.3	chr17	67879439	67879545	(15377896)	C	L1ME3	LINE/L1	(2561)	3585	3467	1663017
2195	17.9	0.7	2.5	chr17	67879546	67879981	(15377460)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	5	1663020
1329	23.8	10.0	11.3	chr17	67879982	67880607	(15376834)	C	L1ME3	LINE/L1	(2680)	3466	2849	1663017
505	23.8	4.8	9.9	chr17	67926624	67926745	(15330696)	C	Kanga2_a	DNA/TcMar-Tc2	(532)	356	240	1663115
895	19.9	1.3	0.0	chr17	67926746	67926896	(15330545)	C	AluJr	SINE/Alu	(20)	292	140	1663118
16	9.6	0.0	0.0	chr17	67926912	67926934	(15330507)	+	(T)n	Simple_repeat	1	23	(0)	1663119
1773	17.9	0.0	4.0	chr17	68309472	68309582	(14947859)	+	AluJo	SINE/Alu	194	296	(16)	1663944
2234	11.8	1.9	0.0	chr17	68309583	68309888	(14947553)	+	AluSq	SINE/Alu	1	312	(1)	1663946
15356	13.3	5.2	0.7	chr17	68910061	68911734	(14345707)	+	L1MA3	LINE/L1	15	1767	(5798)	1664956
42	0.0	0.0	0.0	chr17	68911735	68911770	(14345671)	+	(AC)n	Simple_repeat	1	36	(0)	1664957
15356	13.3	5.2	0.7	chr17	68911771	68912559	(14344882)	+	L1MA3	LINE/L1	1768	2597	(4968)	1664956
360	35.1	2.3	0.5	chr17	71084683	71084894	(12172547)	C	L1M5	LINE/L1	(1130)	5016	4801	1668246
2323	9.4	3.9	4.1	chr17	71084907	71085271	(12172170)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1668247
1448	24.6	4.5	1.9	chr17	71594398	71594761	(11662680)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1669046
23316	8.5	0.9	0.4	chr17	71644033	71648940	(11608501)	+	L1PA10	LINE/L1	1420	6348	(5)	1669107
4787	8.9	1.9	2.0	chr17	72799100	72800118	(10457323)	+	MER11A	LTR/ERVK	1	1266	(0)	1671034
190	31.3	5.7	9.8	chr17	72800182	72800303	(10457138)	C	L2	LINE/L2	(1256)	2163	2047	1671035
2227	10.0	0.4	0.0	chr17	72800304	72800608	(10456833)	C	AluSx	SINE/Alu	(0)	312	2	1671036
570	31.2	7.7	8.1	chr17	72978263	72978695	(10278746)	C	L2b	LINE/L2	(9)	3366	2936	1671356
192	32.3	1.0	10.3	chr17	72978832	72978938	(10278503)	C	L2c	LINE/L2	(10)	3377	3281	1671357
2348	12.9	0.5	1.1	chr17	72978989	72979365	(10278076)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1671358
16	20.9	0.0	0.0	chr17	73192178	73192210	(10065231)	+	A-rich	Low_complexity	1	33	(0)	1671831
183	40.4	6.7	1.5	chr17	73733525	73733848	(9523593)	+	L2	LINE/L2	2109	2450	(969)	1672860
277	16.7	4.8	0.0	chr17	75113998	75114057	(8143384)	C	MER115	DNA/hAT-Tip100	(616)	77	15	1675378
713	14.6	0.4	1.4	chr17	75342437	75342585	(7914856)	C	FLAM_C	SINE/Alu	(84)	218	6	1675903
1809	18.1	0.0	1.0	chr17	75342765	75343063	(7914378)	+	AluJb	SINE/Alu	1	296	(16)	1675904
310	30.4	10.1	4.1	chr17	75904070	75904358	(7353083)	C	L2a	LINE/L2	(5)	3421	3071	1676996
902	19.8	6.3	0.5	chr17	76379384	76379591	(6877850)	+	MLT1C	LTR/ERVL-MaLR	203	423	(44)	1677944
2169	13.9	0.0	0.0	chr17	76719294	76719587	(6537854)	C	AluSz	SINE/Alu	(17)	295	2	1678599
2185	7.8	0.0	7.2	chr17	76719841	76720159	(6537282)	+	AluSq2	SINE/Alu	2	297	(16)	1678600
39	0.0	0.0	0.0	chr17	77044198	77044233	(6213208)	+	(ATT)n	Simple_repeat	1	36	(0)	1679309
1112	14.4	1.2	1.8	chr17	77044236	77044405	(6213036)	C	AluSx	SINE/Alu	(31)	281	113	1679310
1256	4.4	0.0	0.0	chr17	77044412	77044569	(6212872)	+	L1PA3	LINE/L1	5998	6155	(0)	1679311
531	29.4	9.2	4.0	chr17	77086824	77087121	(6170320)	+	Tigger13a	DNA/TcMar-Tigger	122	436	(335)	1679413
412	8.5	0.0	0.6	chr17	77673910	77673986	(5583455)	+	MLT2B3	LTR/ERVL	640	726	(3)	1680431
687	19.9	14.9	0.0	chr17	77728599	77728764	(5528677)	+	MER58A	DNA/hAT-Charlie	29	223	(1)	1680542
20	24.0	0.0	0.0	chr17	77888947	77888988	(5368453)	+	A-rich	Low_complexity	1	42	(0)	1680824
28	30.7	5.5	0.8	chr17	77888989	77889049	(5368392)	+	GA-rich	Low_complexity	37	134	(0)	1680823
1474	24.2	9.5	3.0	chr17	77889471	77889622	(5367819)	+	MLT1C	LTR/ERVL-MaLR	7	173	(294)	1680825
2095	10.8	0.0	6.0	chr17	78006813	78007144	(5250297)	C	AluSz	SINE/Alu	(0)	312	1	1681046
3820	11.8	17.4	1.1	chr17	78029230	78029808	(5227633)	C	Tigger3	DNA/TcMar-Tigger	(3)	3026	2334	1681083
34	0.0	0.0	0.0	chr17	78029809	78029837	(5227604)	+	(AC)n	Simple_repeat	1	29	(0)	1681084
3820	12.5	13.0	2.9	chr17	78029838	78030150	(5227291)	C	Tigger3b	DNA/TcMar-Tigger	(696)	535	203	1681083
511	22.0	8.9	10.4	chr17	78176755	78176947	(5080494)	C	MER20	DNA/hAT-Charlie	(25)	194	5	1681327
468	16.9	0.0	0.0	chr17	78177122	78177192	(5080249)	C	AluSz	SINE/Alu	(241)	71	1	1681328
2136	14.3	0.3	1.0	chr17	78312012	78312325	(4945116)	+	AluSx	SINE/Alu	1	312	(0)	1681628
2005	15.8	6.6	8.6	chr17	78312326	78312606	(4944835)	+	MLT1A1	LTR/ERVL-MaLR	156	408	(0)	1681627
1260	11.3	0.0	0.0	chr17	78865643	78865810	(4391631)	+	AluSx1	SINE/Alu	134	301	(11)	1682592
345	21.3	3.5	0.0	chr17	79393015	79393108	(3864333)	+	L1MA4A	LINE/L1	6190	6274	(29)	1683371
295	28.8	3.0	1.2	chr17	79433393	79433555	(3823886)	+	MLT1H	LTR/ERVL-MaLR	58	188	(301)	1683417
2841	1.9	0.0	0.0	chr17	80051348	80051658	(3205783)	+	AluYa5	SINE/Alu	1	311	(0)	1684371
323	28.6	15.2	0.0	chr17	80605641	80605752	(2651689)	+	MIRb	SINE/MIR	116	247	(21)	1685298
12	21.6	0.0	0.0	chr17	81122097	81122128	(2135313)	+	G-rich	Low_complexity	1	32	(0)	1685874
16	0.0	0.0	0.0	chr17	81495058	81495077	(1762364)	+	(CTG)n	Simple_repeat	1	20	(0)	1686309
413	32.1	0.6	5.6	chr17	81495114	81495291	(1762150)	C	MLT1N2	LTR/ERVL-MaLR	(287)	275	107	1686310
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
407	29.0	12.0	0.0	chr17	82552199	82552360	(705081)	C	L1MC4	LINE/L1	(0)	8042	7859	1687870
2225	7.8	4.2	0.0	chr17	82646950	82647244	(610197)	+	AluSx1	SINE/Alu	1	308	(4)	1688028
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
13	19.1	0.0	6.4	chr18	158407	158453	(80214832)	+	(CCCTCCA)n	Simple_repeat	1	47	(0)	1689320
395	33.2	10.5	3.8	chr18	716937	717353	(79655932)	C	LTR85c	LTR/Gypsy?	(2)	821	374	1690304
326	26.2	7.5	5.9	chr18	3409640	3409809	(76963476)	+	HAL1ME	LINE/L1	2273	2445	(20)	1694344
2292	9.6	0.0	3.2	chr18	3410629	3410942	(76962343)	C	AluSz6	SINE/Alu	(8)	304	1	1694345
2337	21.4	8.4	3.8	chr18	3997966	3999272	(76374013)	C	L1MC5	LINE/L1	(602)	8702	7245	1695386
278	35.1	15.9	1.1	chr18	5583197	5583383	(74789902)	C	MIRb	SINE/MIR	(27)	241	22	1697431
871	19.0	3.5	5.8	chr18	8035664	8035870	(72337415)	+	L1MA10	LINE/L1	6126	6327	(7)	1700898
433	31.0	13.8	1.7	chr18	8036073	8036420	(72336865)	+	L3	LINE/CR1	3688	4084	(15)	1700899
2980	19.3	6.8	2.4	chr18	9801581	9801755	(70571530)	C	L1MB8	LINE/L1	(504)	5674	5484	1703688
2709	18.5	1.5	0.6	chr18	9801750	9802266	(70571019)	C	L1MB8	LINE/L1	(1062)	5084	4563	1703688
7372	22.1	8.8	1.1	chr18	9818191	9821287	(70551998)	C	L1MB2	LINE/L1	(0)	6184	2699	1703710
727	22.2	6.5	1.0	chr18	9821301	9821505	(70551780)	+	MER113	DNA/hAT-Charlie	176	392	(129)	1703711
5396	19.9	4.8	2.8	chr18	9821524	9823611	(70549674)	+	L1MD2	LINE/L1	4209	6359	(0)	1703712
209	22.2	12.5	0.0	chr18	9840319	9840381	(70532904)	+	L2a	LINE/L2	3346	3417	(9)	1703734
211	28.8	6.3	4.8	chr18	11976763	11976886	(68396399)	C	OldhAT1	DNA/hAT-Ac	(2321)	527	402	1706720
699	13.8	0.0	11.3	chr18	11977142	11977300	(68395985)	+	AluJb	SINE/Alu	2	142	(170)	1706721
16	9.8	0.0	0.0	chr18	12272150	12272171	(68101114)	+	(G)n	Simple_repeat	1	22	(0)	1707116
339	24.5	12.0	5.8	chr18	21266261	21266416	(59106869)	+	L3	LINE/CR1	3655	3821	(278)	1712250
548	28.0	4.5	4.5	chr18	21266431	21266654	(59106631)	+	Charlie15a	DNA/hAT-Charlie	1	224	(0)	1712251
548	30.8	8.8	0.0	chr18	21266670	21266877	(59106408)	+	L3	LINE/CR1	3867	4094	(5)	1712250
637	24.2	0.0	3.0	chr18	21568301	21568432	(58804853)	+	FLAM_A	SINE/Alu	1	128	(14)	1712813
19	10.9	9.4	1.7	chr18	21751672	21751724	(58621561)	+	(TCCTT)n	Simple_repeat	1	58	(0)	1713244
554	19.3	8.5	10.2	chr18	21751731	21751897	(58621388)	C	HAL1ME	LINE/L1	(748)	1717	1554	1713245
17	4.9	0.0	0.0	chr18	21751971	21751991	(58621294)	+	(TG)n	Simple_repeat	1	21	(0)	1713246
1925	16.5	9.3	1.9	chr18	22468269	22468645	(57904640)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1714603
1137	14.9	0.5	0.0	chr18	22468689	22468896	(57904389)	C	L1M1	LINE/L1	(7294)	271	63	1714604
444	14.9	0.0	0.0	chr18	22827336	22827409	(57545876)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	301	1715066
2383	19.3	7.6	1.3	chr18	22827404	22827944	(57545341)	C	MLT-int	LTR/ERVL-MaLR	(1139)	596	19	1715067
1902	17.4	0.0	2.9	chr18	23331884	23332194	(57041091)	C	AluJr	SINE/Alu	(10)	302	1	1715998
546	18.0	23.5	10.4	chr18	23332195	23332208	(57041077)	C	L1ME3	LINE/L1	(483)	5681	5679	1715997
698	15.9	1.5	2.2	chr18	23332209	23332343	(57040942)	C	L1MB7	LINE/L1	(0)	6184	6051	1715999
546	18.0	23.5	10.4	chr18	23332344	23332530	(57040755)	C	L1ME3	LINE/L1	(486)	5678	5451	1715997
1977	10.1	4.5	1.0	chr18	23985728	23986027	(56387258)	+	THE1D	LTR/ERVL-MaLR	71	381	(0)	1717160
3277	19.8	8.9	4.1	chr18	23986046	23986432	(56386853)	+	L1ME1	LINE/L1	420	808	(5592)	1717161
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
287	28.3	18.4	3.4	chr18	24911221	24911454	(55461831)	C	L2c	LINE/L2	(0)	3387	3111	1718664
204	39.0	6.7	5.7	chr18	29626216	29626617	(50746668)	+	L2	LINE/L2	2671	3076	(343)	1725284
2091	22.9	5.8	1.0	chr18	31049306	31049809	(49323476)	C	MLT1F2	LTR/ERVL-MaLR	(29)	531	2	1727138
3033	19.7	2.2	1.9	chr18	32584466	32584856	(47788429)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	263	1729593
30	0.0	3.1	0.0	chr18	32584857	32584888	(47788397)	+	(AAACA)n	Simple_repeat	1	33	(0)	1729594
3033	19.7	2.2	1.9	chr18	32584889	32585118	(47788167)	C	Tigger17a	DNA/TcMar-Tigger	(392)	262	31	1729593
288	33.6	6.4	5.2	chr18	32585144	32585297	(47787988)	+	L3	LINE/CR1	3833	3988	(111)	1729595
2012	14.5	4.4	0.3	chr18	32961537	32961861	(47411424)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1730124
2300	24.3	8.5	3.3	chr18	32961862	32962782	(47410503)	C	L1MEf	LINE/L1	(4046)	2196	1218	1730123
610	11.1	3.2	0.0	chr18	33231967	33232056	(47141229)	C	MER58B	DNA/hAT-Charlie	(0)	341	249	1730465
1428	24.0	2.5	10.6	chr18	34358852	34359310	(46013975)	+	LTR55	LTR/ERVL?	118	532	(16)	1731827
210	33.0	8.1	0.0	chr18	34359336	34359426	(46013859)	+	L2c	LINE/L2	3063	3161	(226)	1731829
228	36.5	6.0	0.6	chr18	34703455	34703611	(45669674)	C	L3b	LINE/CR1	(396)	4836	4671	1732298
38	4.9	0.0	0.0	chr18	34710660	34710701	(45662584)	+	(GT)n	Simple_repeat	1	42	(0)	1732305
12728	6.8	0.3	0.3	chr18	36316723	36319181	(44054104)	C	L1PA6	LINE/L1	(0)	6154	3694	1734638
244	32.5	10.1	0.7	chr18	37746644	37746795	(42626490)	+	LTR104_Mam	LTR/Gypsy	924	1091	(418)	1736465
239	25.3	2.4	3.5	chr18	37747476	37747561	(42625724)	C	L1M6	LINE/L1	(4026)	2470	2386	1736460
299	32.7	1.9	6.7	chr18	38931657	38931820	(41441465)	+	MIR3	SINE/MIR	15	170	(38)	1738025
3685	11.1	4.0	0.8	chr18	39685269	39685845	(40687440)	+	MER51C	LTR/ERV1	1	640	(0)	1739049
552	21.5	21.2	0.0	chr18	48162330	48162492	(32210793)	+	MIR	SINE/MIR	56	262	(0)	1751436
694	30.5	3.5	2.2	chr18	48162603	48162827	(32210458)	+	MIRb	SINE/MIR	31	258	(10)	1751437
201	15.2	0.0	0.0	chr18	48568331	48568363	(31804922)	C	MIR	SINE/MIR	(72)	190	158	1752124
2072	19.8	0.2	1.5	chr18	48568455	48568577	(31804708)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	268	1752125
597	35.4	9.3	2.0	chr18	48818161	48818667	(31554618)	C	L2	LINE/L2	(619)	2800	2253	1752487
306	19.2	14.9	2.4	chr18	48818862	48818984	(31554301)	C	L2	LINE/L2	(1496)	1923	1783	1752487
369	23.4	9.9	1.4	chr18	49432421	49432559	(30940726)	+	L1ME3D	LINE/L1	5795	5946	(296)	1753524
1626	15.3	5.6	4.3	chr18	49432600	49432899	(30940386)	C	AluJo	SINE/Alu	(8)	304	1	1753525
14382	19.0	6.0	3.4	chr18	50401009	50404194	(29969091)	+	HERVS71-int	LTR/ERV1	4	3400	(5578)	1755068
212	25.8	15.1	6.3	chr18	50968315	50968488	(29404797)	+	MIRc	SINE/MIR	1	192	(76)	1756118
207	22.8	10.2	3.7	chr18	50968522	50968603	(29404682)	C	MER5B	DNA/hAT-Charlie	(4)	174	87	1756119
2026	13.7	0.7	2.0	chr18	51199141	51199440	(29173845)	C	AluJb	SINE/Alu	(16)	296	1	1756523
684	20.2	12.7	0.4	chr18	51199579	51199812	(29173473)	C	MER33	DNA/hAT-Charlie	(13)	311	45	1756524
201	26.0	7.6	1.4	chr18	51278217	51278290	(29094995)	+	MER91C	DNA/hAT-Tip100	33	111	(29)	1756682
15	27.2	0.0	6.7	chr18	58671348	58671422	(21701863)	+	(GCCCC)n	Simple_repeat	1	75	(0)	1767638
2162	15.7	5.3	0.0	chr18	62477469	62477843	(17895442)	+	MLT1A1	LTR/ERVL-MaLR	1	396	(12)	1773517
295	32.8	7.9	0.0	chr18	62497238	62497365	(17875920)	+	L3	LINE/CR1	3081	3219	(880)	1773549
201	27.7	1.6	11.3	chr18	62497368	62497492	(17875793)	C	L2c	LINE/L2	(16)	3371	3236	1773550
586	23.5	23.9	0.3	chr18	63050017	63050320	(17322965)	C	Charlie2a	DNA/hAT-Charlie	(2394)	467	80	1774472
240	29.4	5.3	8.0	chr18	63050334	63050470	(17322815)	+	Charlie2a	DNA/hAT-Charlie	23	155	(2706)	1774473
2014	13.9	0.3	1.7	chr18	63050680	63050981	(17322304)	C	AluJo	SINE/Alu	(14)	298	1	1774474
197	35.9	4.1	2.5	chr18	74073923	74074042	(6299243)	C	L2b	LINE/L2	(4)	3371	3250	1789427
275	35.9	4.6	6.8	chr18	74074101	74074617	(6298668)	+	L2b	LINE/L2	540	1044	(2375)	1789428
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
3350	13.4	2.5	0.4	chr18	80076058	80076575	(296710)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1796097
1621	19.9	9.8	0.0	chr18	80076716	80077082	(296203)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	2	1796098
769	24.5	18.7	2.2	chr19	352270	352640	(58264976)	C	LTR16	LTR/ERVL	(2)	436	1	1796790
2173	10.0	1.0	0.7	chr19	636699	636998	(57980618)	+	AluSx1	SINE/Alu	1	301	(11)	1797270
628	25.2	7.4	2.7	chr19	637054	637333	(57980283)	C	MLT1D	LTR/ERVL-MaLR	(21)	484	174	1797271
13	17.7	4.2	4.0	chr19	751676	751723	(57865893)	+	(GGCTGG)n	Simple_repeat	1	50	(0)	1797521
241	18.1	10.8	5.7	chr19	1292406	1292493	(57325123)	C	L2b	LINE/L2	(1)	3374	3282	1798508
315	26.3	18.9	0.0	chr19	1292546	1292743	(57324873)	C	L2b	LINE/L2	(339)	3080	2837	1798508
975	21.1	10.7	0.5	chr19	2060604	2060997	(56556619)	+	MLT1D	LTR/ERVL-MaLR	71	505	(0)	1800056
12	11.1	0.0	8.6	chr19	2474535	2474569	(56143047)	+	(ATTTAA)n	Simple_repeat	1	35	(0)	1800890
224	35.2	6.1	2.1	chr19	2475041	2475182	(56142434)	+	MIRb	SINE/MIR	112	259	(9)	1800891
12	4.3	8.3	0.0	chr19	2527458	2527481	(56090135)	+	(GGA)n	Simple_repeat	1	26	(0)	1801017
573	21.0	3.1	7.7	chr19	2527686	2527855	(56089761)	C	MER20	DNA/hAT-Charlie	(35)	184	23	1801018
2566	5.3	0.7	0.0	chr19	2901513	2901815	(55715801)	C	AluSc	SINE/Alu	(3)	306	2	1801888
1224	17.4	3.0	5.5	chr19	2901816	2901994	(55715622)	C	LTR7B	LTR/ERV1	(123)	341	163	1801887
277	19.3	0.0	9.8	chr19	2902031	2902122	(55715494)	C	LTR7B	LTR/ERV1	(202)	262	180	1801889
4553	22.0	9.7	1.4	chr19	2922888	2923529	(55694087)	+	MER68-int	LTR/ERVL	2270	2990	(0)	1801924
1454	23.8	18.9	1.9	chr19	2923533	2924007	(55693609)	+	MER68	LTR/ERVL	8	563	(0)	1801924
17	23.2	1.7	3.3	chr19	3359550	3359608	(55258008)	+	(CCCT)n	Simple_repeat	1	60	(0)	1803050
12	13.6	0.0	7.9	chr19	3359975	3360012	(55257604)	+	(GCCCCC)n	Simple_repeat	1	38	(0)	1803051
2186	7.9	1.8	0.4	chr19	3821605	3821908	(54795708)	C	AluSz	SINE/Alu	(0)	312	1	1804091
1077	13.1	0.0	3.0	chr19	3822303	3822470	(54795146)	C	AluJr	SINE/Alu	(7)	305	143	1804092
1860	7.0	0.4	3.3	chr19	4842446	4842623	(53774993)	+	AluSx3	SINE/Alu	132	305	(6)	1806635
216	25.9	13.4	1.7	chr19	4842653	4842770	(53774846)	C	L2	LINE/L2	(508)	2911	2778	1806637
2082	9.3	0.0	0.4	chr19	4842941	4843210	(53774406)	+	AluSx	SINE/Alu	3	271	(41)	1806638
2228	10.8	0.7	0.0	chr19	4851185	4851479	(53766137)	+	AluSx3	SINE/Alu	1	297	(14)	1806669
315	31.2	7.8	1.0	chr19	4851623	4851933	(53765683)	C	L2	LINE/L2	(435)	2984	2651	1806670
2032	12.5	0.3	3.0	chr19	4869773	4870077	(53747539)	C	AluSx	SINE/Alu	(13)	299	3	1806724
1028	27.9	12.4	0.9	chr19	4870078	4870316	(53747300)	C	L2a	LINE/L2	(240)	3186	2935	1806723
194	18.4	9.3	0.0	chr19	4870318	4870366	(53747250)	C	MIR1_Amn	SINE/MIR	(105)	125	72	1806725
23	37.4	0.0	0.0	chr19	5048280	5048364	(53569252)	+	(GT)n	Simple_repeat	1	85	(0)	1807139
2362	9.7	0.0	0.0	chr19	5329484	5329781	(53287835)	+	AluY	SINE/Alu	1	298	(13)	1807682
518	20.6	4.6	12.7	chr19	5329782	5329794	(53287822)	C	MER45A	DNA/hAT-Tip100	(66)	112	112	1807681
2117	12.9	1.0	1.0	chr19	5329795	5330096	(53287520)	+	AluSx	SINE/Alu	1	302	(10)	1807683
351	24.3	1.8	8.3	chr19	5357336	5357456	(53260160)	+	MIRb	SINE/MIR	77	189	(79)	1807752
358	35.4	11.5	1.4	chr19	6460691	6460910	(52156706)	C	MIR	SINE/MIR	(1)	261	23	1810296
14	15.9	0.0	0.0	chr19	6755011	6755038	(51862578)	+	(CTC)n	Simple_repeat	1	28	(0)	1811061
904	10.5	0.0	0.8	chr19	7193107	7193230	(51424386)	C	AluSx4	SINE/Alu	(1)	309	187	1812239
808	16.5	2.3	0.0	chr19	7340971	7341097	(51276519)	+	AluJr	SINE/Alu	1	130	(182)	1812690
2050	12.2	3.7	0.0	chr19	7341317	7341603	(51276013)	C	AluSx4	SINE/Alu	(12)	298	1	1812691
1941	14.4	0.0	5.1	chr19	8045818	8046130	(50571486)	C	AluJo	SINE/Alu	(15)	297	1	1814262
515	27.6	7.9	6.7	chr19	9625768	9625935	(48991681)	+	L1MC4a	LINE/L1	4860	5030	(1116)	1817799
682	30.2	2.1	2.1	chr19	9625945	9626235	(48991381)	C	LTR55	LTR/ERVL?	(5)	543	253	1817805
1562	13.0	0.5	0.0	chr19	9626236	9626450	(48991166)	+	AluSx1	SINE/Alu	87	302	(10)	1817806
738	19.9	0.8	0.0	chr19	9644309	9644439	(48973177)	+	AluJo	SINE/Alu	1	132	(180)	1817824
1340	13.7	6.4	16.1	chr19	9644498	9644881	(48972735)	C	THE1D	LTR/ERVL-MaLR	(37)	344	1	1817825
765	27.6	14.2	5.3	chr19	10098897	10099304	(48518312)	+	L2a	LINE/L2	2501	2923	(496)	1818898
2492	5.7	0.0	0.3	chr19	10099305	10099601	(48518015)	+	AluY	SINE/Alu	11	306	(5)	1818899
268	27.2	3.7	6.4	chr19	10252781	10252890	(48364726)	+	MIRb	SINE/MIR	91	197	(71)	1819287
242	29.7	0.0	1.5	chr19	10252903	10252967	(48364649)	+	MIR	SINE/MIR	12	75	(187)	1819288
2180	12.2	0.0	1.3	chr19	10595276	10595579	(48022037)	C	AluSx1	SINE/Alu	(11)	301	2	1820197
808	16.0	0.0	0.0	chr19	10595580	10595698	(48021918)	+	AluJr	SINE/Alu	171	289	(23)	1820198
12	14.6	0.0	5.9	chr19	10595721	10595754	(48021862)	+	A-rich	Low_complexity	1	34	(0)	1820199
50	2.2	0.0	0.0	chr19	10595892	10595938	(48021678)	+	(GT)n	Simple_repeat	1	47	(0)	1820200
1745	12.0	0.0	13.5	chr19	10596001	10596132	(48021484)	+	AluSz6	SINE/Alu	5	135	(177)	1820201
2285	9.6	1.0	0.3	chr19	10716906	10717206	(47900410)	+	AluSz	SINE/Alu	2	304	(8)	1820508
14	14.1	0.0	3.0	chr19	11505740	11505772	(47111844)	+	(GCCTCA)n	Simple_repeat	1	33	(0)	1822502
12	28.7	0.0	3.7	chr19	12294454	12294507	(46323109)	+	G-rich	Low_complexity	1	54	(0)	1824167
11	19.5	3.9	5.6	chr19	12484382	12484433	(46133183)	+	G-rich	Low_complexity	1	54	(0)	1824522
1006	15.1	0.0	0.0	chr19	12685866	12686011	(45931605)	C	AluJb	SINE/Alu	(20)	292	147	1824998
873	26.7	13.4	2.2	chr19	12686014	12686524	(45931092)	+	L2a	LINE/L2	2802	3394	(32)	1824995
405	28.9	16.9	1.6	chr19	12749818	12750007	(45867609)	+	MIR	SINE/MIR	38	262	(0)	1825142
35	28.5	2.0	3.3	chr19	12833820	12833883	(45783733)	+	(CCG)n	Simple_repeat	1	104	(47)	1825326
29	8.4	0.0	5.4	chr19	12833884	12833940	(45783676)	+	(CTCCTCC)n	Simple_repeat	1	53	(0)	1825327
35	28.5	2.0	3.3	chr19	12833941	12833967	(45783649)	+	(CCG)n	Simple_repeat	105	151	(0)	1825326
403	23.0	7.4	1.7	chr19	13277240	13277354	(45340262)	+	MER91B	DNA/hAT-Tip100	1	122	(68)	1826314
692	32.0	1.6	1.6	chr19	13578326	13578579	(45039037)	+	MER102c	DNA/hAT-Charlie	78	331	(0)	1827162
406	30.5	12.1	0.6	chr19	13578590	13578757	(45038859)	C	MIRc	SINE/MIR	(63)	205	16	1827163
1510	11.4	0.4	4.7	chr19	13578850	13579085	(45038531)	+	AluJr	SINE/Alu	42	267	(45)	1827164
18	13.5	0.0	0.0	chr19	14080875	14080907	(44536709)	+	(GGAGG)n	Simple_repeat	1	33	(0)	1828528
226	37.1	2.8	0.0	chr19	14081002	14081106	(44536510)	+	MIR1_Amn	SINE/MIR	29	136	(94)	1828529
1519	26.7	15.3	5.5	chr19	14145284	14146259	(44471357)	C	L2a	LINE/L2	(3)	3423	2313	1828696
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
1522	15.1	4.1	8.8	chr19	16293935	16294239	(42323377)	C	AluJr	SINE/Alu	(22)	290	1	1833624
15	18.4	5.4	0.0	chr19	16626920	16626956	(41990660)	+	(CA)n	Simple_repeat	1	39	(0)	1834290
201	20.4	2.2	0.0	chr19	17336676	17336719	(41280897)	+	MamTip2	DNA/hAT-Tip100	100	144	(161)	1836059
382	32.4	9.2	0.0	chr19	17336833	17337039	(41280577)	C	L2b	LINE/L2	(158)	3217	2990	1836060
180	34.1	5.5	0.0	chr19	17337067	17337151	(41280465)	C	L3	LINE/CR1	(3010)	1089	1000	1836061
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
695	29.0	9.6	1.5	chr19	17778935	17779662	(40837954)	C	L2a	LINE/L2	(23)	3403	2474	1837257
2214	10.9	0.7	0.0	chr19	17844517	17844810	(40772806)	+	AluSz	SINE/Alu	1	296	(16)	1837416
29	3.2	0.0	0.0	chr19	17844811	17844842	(40772774)	+	(AAAG)n	Simple_repeat	1	32	(0)	1837417
713	16.3	0.0	8.5	chr19	17845085	17845160	(40772456)	+	FLAM_C	SINE/Alu	2	77	(66)	1837418
2083	9.5	4.9	0.7	chr19	17845161	17845454	(40772162)	C	AluSz6	SINE/Alu	(5)	307	1	1837419
1275	12.0	3.7	1.1	chr19	17946927	17947096	(40670520)	+	AluSq2	SINE/Alu	137	313	(0)	1837694
402	31.4	8.0	1.7	chr19	17947249	17947423	(40670193)	+	MIR	SINE/MIR	46	232	(30)	1837696
26	13.4	0.0	2.0	chr19	17947791	17947841	(40669775)	+	(CGGCCC)n	Simple_repeat	1	51	(0)	1837697
18	17.7	0.0	0.0	chr19	18110202	18110239	(40507377)	+	(CGTC)n	Simple_repeat	1	38	(0)	1838133
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
2397	7.1	0.6	5.2	chr19	18720340	18720665	(39896951)	C	AluY	SINE/Alu	(0)	311	1	1839443
2133	12.2	0.6	4.1	chr19	18720666	18720800	(39896816)	C	AluSz	SINE/Alu	(188)	124	2	1839442
753	22.2	14.7	1.2	chr19	18720918	18721195	(39896421)	C	MLT1C	LTR/ERVL-MaLR	(8)	497	105	1839444
2331	9.8	0.7	0.3	chr19	19379189	19379493	(39238123)	+	AluSq2	SINE/Alu	1	306	(7)	1840872
1192	15.1	0.6	0.0	chr19	19379494	19379665	(39237951)	+	AluSz6	SINE/Alu	134	306	(6)	1840873
182	31.9	13.0	0.0	chr19	19379670	19379763	(39237853)	+	MIRb	SINE/MIR	158	265	(3)	1840874
208	27.1	4.1	2.8	chr19	19379882	19379953	(39237663)	C	MIR3	SINE/MIR	(43)	165	93	1840875
31	3.0	0.0	0.0	chr19	19379962	19379995	(39237621)	+	(TTGT)n	Simple_repeat	1	34	(0)	1840876
2200	9.9	0.0	0.0	chr19	19379996	19380278	(39237338)	C	AluSc8	SINE/Alu	(28)	283	1	1840877
2153	12.2	1.0	0.0	chr19	19686853	19687156	(38930460)	+	AluSz6	SINE/Alu	1	307	(5)	1841442
12	27.7	0.0	2.2	chr19	19687319	19687363	(38930253)	+	(CTCC)n	Simple_repeat	1	45	(0)	1841443
2706	22.5	5.4	1.9	chr19	20017036	20017939	(38599677)	+	L1M4c	LINE/L1	2649	3582	(3260)	1841955
2233	9.4	0.3	0.0	chr19	23686338	23686625	(34930991)	C	AluSq2	SINE/Alu	(24)	289	1	1847041
2721	14.5	0.6	8.5	chr19	23686626	23686677	(34930939)	+	MER57E3	LTR/ERV1	436	487	(0)	1847040
624	28.9	3.1	0.9	chr19	29248339	29248558	(29369058)	C	MIRb	SINE/MIR	(8)	260	36	1849970
1948	13.8	18.0	0.3	chr19	29480904	29481282	(29136334)	+	LOR1b	LTR/ERV1	1	461	(0)	1850293
294	29.0	12.9	2.1	chr19	29876158	29876344	(28741272)	C	LTR33	LTR/ERVL	(302)	213	4	1851048
265	23.2	19.2	4.4	chr19	30664470	30664649	(27952967)	+	MIRb	SINE/MIR	27	239	(29)	1852162
226	32.3	1.5	0.0	chr19	33118830	33118894	(25498722)	+	L2b	LINE/L2	3258	3323	(52)	1856208
2392	8.2	0.0	0.3	chr19	33119418	33119711	(25497905)	+	AluSc	SINE/Alu	1	293	(16)	1856209
2114	11.7	0.0	4.2	chr19	33279262	33279570	(25338046)	C	AluSx3	SINE/Alu	(14)	297	2	1856529
358	23.9	9.5	3.1	chr19	34429060	34429201	(24188415)	C	MIR	SINE/MIR	(78)	184	43	1858628
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
2211	9.6	3.9	0.0	chr19	35426963	35427255	(23190361)	+	AluSq	SINE/Alu	1	305	(8)	1860388
1839	21.3	5.3	8.8	chr19	35427256	35427653	(23189963)	+	LTR71B	LTR/ERV1	201	604	(6)	1860387
31	0.0	0.0	0.0	chr19	35427656	35427684	(23189932)	+	(TTTTTC)n	Simple_repeat	1	29	(0)	1860389
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
192	25.7	10.7	0.0	chr19	36687879	36687972	(21929644)	+	L2a	LINE/L2	3260	3400	(26)	1863053
19	21.8	0.0	2.2	chr19	36916623	36916667	(21700949)	+	(TG)n	Simple_repeat	1	45	(0)	1863509
209	27.8	19.4	2.2	chr19	36916809	36916944	(21700672)	+	L2	LINE/L2	2042	2206	(1213)	1863510
289	25.4	2.5	0.0	chr19	37519896	37520000	(21097616)	C	MIR3	SINE/MIR	(121)	147	41	1864593
2179	15.8	6.1	4.9	chr19	37780040	37780547	(20837069)	C	L1MA7	LINE/L1	(5)	6286	5812	1865094
21	19.9	2.2	0.0	chr19	37906671	37906716	(20710900)	+	(CG)n	Simple_repeat	1	47	(0)	1865341
213	26.5	16.4	0.3	chr19	38374243	38374355	(20243261)	+	MIR	SINE/MIR	18	155	(113)	1866528
411	28.4	3.2	3.5	chr19	38421226	38421416	(20196200)	+	MIR	SINE/MIR	2	192	(76)	1866614
260	27.9	13.4	7.4	chr19	38818934	38818972	(19798644)	+	L2a	LINE/L2	2951	2996	(423)	1867520
37	0.0	0.0	0.0	chr19	38818978	38819009	(19798607)	+	(TG)n	Simple_repeat	1	32	(0)	1867523
861	10.5	0.0	0.0	chr19	38819020	38819133	(19798483)	+	AluJo	SINE/Alu	197	310	(2)	1867524
257	17.2	8.6	0.0	chr19	38819215	38819278	(19798338)	C	L2a	LINE/L2	(277)	3149	3080	1867525
740	26.0	10.4	1.3	chr19	38819292	38819595	(19798021)	+	L2a	LINE/L2	3073	3407	(19)	1867520
1852	15.2	0.0	3.4	chr19	39258088	39258241	(19359375)	+	AluJb	SINE/Alu	3	151	(161)	1868682
5711	15.2	2.7	2.8	chr19	39258242	39259208	(19358408)	C	LTR13A	LTR/ERVK	(0)	966	1	1868683
248	25.6	2.5	2.5	chr19	40089458	40089537	(18528079)	C	MIR	SINE/MIR	(0)	262	183	1870210
232	30.6	1.4	0.0	chr19	40089535	40089606	(18528010)	C	MIR	SINE/MIR	(188)	74	2	1870210
39	2.7	0.0	0.0	chr19	40089618	40089655	(18527961)	+	(AC)n	Simple_repeat	1	38	(0)	1870211
1740	10.9	0.0	1.3	chr19	40432844	40433081	(18184535)	C	AluSx1	SINE/Alu	(77)	235	1	1871047
17	6.6	6.2	0.0	chr19	40433131	40433162	(18184454)	+	(TTTGT)n	Simple_repeat	1	34	(0)	1871048
1352	20.3	3.7	4.9	chr19	40433169	40433473	(18184143)	+	AluJo	SINE/Alu	2	302	(10)	1871049
492	25.5	20.9	0.5	chr19	40433498	40433706	(18183910)	C	L2a	LINE/L2	(338)	3081	2819	1871042
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
245	30.7	0.1	1.1	chr19	40434245	40434336	(18183280)	+	MIRc	SINE/MIR	83	176	(86)	1871051
2170	10.2	1.6	1.3	chr19	40770520	40770823	(17846793)	+	AluSz	SINE/Alu	1	305	(7)	1871919
4398	13.5	2.8	3.6	chr19	40770942	40771710	(17845906)	C	LTR12D	LTR/ERV1	(123)	1131	370	1871920
2192	11.4	0.7	0.7	chr19	40832260	40832557	(17785059)	+	AluSx1	SINE/Alu	2	299	(13)	1872046
2599	5.8	0.0	0.0	chr19	41262758	41263068	(17354548)	+	AluSq	SINE/Alu	1	311	(2)	1873026
4146	15.5	4.8	0.1	chr19	42515959	42516766	(16100850)	+	L1MB3	LINE/L1	3909	4756	(1384)	1875448
336	33.1	4.2	2.2	chr19	43637361	43637538	(14980078)	C	MIR3	SINE/MIR	(23)	185	11	1877294
481	27.7	2.8	0.0	chr19	44212780	44212916	(14404700)	+	MIR	SINE/MIR	95	235	(27)	1878387
2375	7.7	0.7	0.7	chr19	45684511	45684809	(12932807)	+	AluSg7	SINE/Alu	1	299	(10)	1881992
473	28.8	2.7	8.5	chr19	45684810	45684893	(12932723)	+	MIR	SINE/MIR	153	228	(40)	1881991
2446	9.3	0.0	0.3	chr19	45684977	45685286	(12932330)	C	AluSc	SINE/Alu	(0)	309	1	1881993
475	33.2	2.5	4.6	chr19	46173302	46173379	(12444237)	+	ERVL-E-int	LTR/ERVL	2257	2335	(3332)	1883055
2300	16.8	5.9	0.2	chr19	46173380	46173779	(12443837)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	1883056
186	17.6	0.0	0.0	chr19	46308326	46308359	(12309257)	C	MIRc	SINE/MIR	(116)	152	119	1883342
12	0.0	0.0	12.9	chr19	47036074	47036104	(11581512)	+	(CTCCT)n	Simple_repeat	1	31	(0)	1885121
1677	14.6	5.0	3.1	chr19	47036459	47036589	(11581027)	+	AluJb	SINE/Alu	1	133	(179)	1885122
1936	14.2	1.6	3.5	chr19	47036590	47036907	(11580709)	+	AluSx1	SINE/Alu	1	312	(0)	1885123
2619	5.5	0.0	0.0	chr19	47056138	47056444	(11561172)	+	AluY	SINE/Alu	1	307	(4)	1885151
686	19.8	0.0	0.0	chr19	47056618	47056728	(11560888)	+	AluJr	SINE/Alu	1	111	(201)	1885152
1556	15.0	0.0	14.7	chr19	47056730	47056897	(11560719)	C	AluJo	SINE/Alu	(10)	302	137	1885153
1441	13.6	0.0	1.0	chr19	47697793	47697998	(10919618)	C	AluJr	SINE/Alu	(100)	212	9	1886806
238	34.6	3.9	0.0	chr19	47698016	47698114	(10919502)	C	L2b	LINE/L2	(23)	3352	3264	1886807
307	33.2	7.3	1.7	chr19	47698299	47698490	(10919126)	+	MIR	SINE/MIR	18	222	(46)	1886808
1015	16.0	8.4	0.0	chr19	47714098	47714358	(10903258)	C	L1MC4	LINE/L1	(1037)	7005	6783	1886853
395	26.1	1.2	10.3	chr19	47714360	47714543	(10903073)	+	L1MC	LINE/L1	3193	3359	(2787)	1886854
34	2.9	0.0	0.0	chr19	47745861	47745896	(10871720)	+	(GTCGGGG)n	Simple_repeat	1	36	(0)	1886958
252	15.2	0.0	4.3	chr19	47774395	47774463	(10843153)	C	LTR37A	LTR/ERV1	(0)	426	361	1887027
747	17.2	1.7	0.0	chr19	47774464	47774579	(10843037)	+	AluJo	SINE/Alu	1	118	(194)	1887028
2305	10.7	0.7	0.0	chr19	47869304	47869603	(10748013)	C	AluSx1	SINE/Alu	(10)	302	1	1887284
798	21.4	2.0	3.3	chr19	47869604	47869850	(10747766)	C	L1MD	LINE/L1	(801)	5442	5203	1887283
967	26.4	11.4	3.2	chr19	48190313	48190688	(10426928)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	1888161
386	34.6	3.4	6.8	chr19	48514209	48514456	(10103160)	C	L2b	LINE/L2	(0)	3375	3137	1888914
2328	5.4	5.2	1.0	chr19	49546474	49546771	(9070845)	+	AluY	SINE/Alu	1	311	(0)	1891362
874	25.1	8.6	8.8	chr19	49546772	49547107	(9070509)	C	L1MEb	LINE/L1	(5684)	386	44	1891361
17924	13.9	0.3	0.3	chr19	50347480	50350190	(8267426)	C	HERVE_a-int	LTR/ERV1	(0)	7847	5136	1893312
11134	16.8	3.8	1.7	chr19	50350191	50350308	(8267308)	C	L1M1	LINE/L1	(5546)	2019	1888	1893307
2180	14.1	0.0	0.0	chr19	50350309	50350612	(8267004)	C	AluSz6	SINE/Alu	(8)	304	1	1893313
11134	16.8	3.8	1.7	chr19	50350613	50351065	(8266551)	C	L1M1	LINE/L1	(5678)	1887	1406	1893307
669	24.9	9.1	1.6	chr19	51347317	51347508	(7270108)	C	MIR	SINE/MIR	(20)	242	35	1895427
988	22.1	3.8	6.6	chr19	51452086	51452357	(7165259)	+	L1MA7	LINE/L1	5827	6090	(201)	1895654
400	25.4	14.8	3.6	chr19	51452779	51452970	(7164646)	C	MIRb	SINE/MIR	(19)	249	33	1895655
229	32.2	3.2	0.0	chr19	51452977	51453066	(7164550)	C	L2b	LINE/L2	(22)	3353	3261	1895656
2373	29.6	5.6	2.1	chr19	51514294	51515166	(7102450)	+	ERVL-E-int	LTR/ERVL	2873	3778	(1889)	1895763
1913	27.4	5.7	5.9	chr19	51515190	51515674	(7101942)	C	L1MEg	LINE/L1	(2732)	3587	3079	1895764
1506	20.9	3.1	2.6	chr19	51668174	51668521	(6949095)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	13	1896016
268	27.7	1.2	1.2	chr19	54011755	54011838	(4605778)	+	L2c	LINE/L2	3336	3419	(7)	1900803
284	31.4	15.5	6.4	chr19	54099371	54099597	(4518019)	C	MIR	SINE/MIR	(8)	260	2	1901077
2240	10.5	0.3	2.6	chr19	54099803	54100115	(4517501)	C	AluSx1	SINE/Alu	(2)	310	5	1901078
1768	12.0	1.3	9.5	chr19	54995432	54995600	(3622016)	+	AluSq	SINE/Alu	160	299	(14)	1902747
1615	22.1	1.3	0.0	chr19	54995764	54996066	(3621550)	+	AluSz	SINE/Alu	5	311	(1)	1902749
193	31.4	0.9	2.8	chr19	55519505	55519999	(3097617)	+	(TGA)n	Simple_repeat	2	481	(0)	1903903
314	30.6	6.1	2.7	chr19	55520000	55520110	(3097506)	+	L2a	LINE/L2	3312	3426	(0)	1903904
460	25.0	2.9	2.9	chr19	55520128	55520263	(3097353)	C	MIR	SINE/MIR	(1)	261	126	1903905
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
545	34.4	4.6	0.3	chr19	57279572	57279886	(1337730)	+	L2a	LINE/L2	2201	2529	(890)	1907552
8882	21.5	3.9	4.6	chr19	57463790	57467134	(1150482)	C	L1M1	LINE/L1	(3541)	4021	20	1907852
400	36.3	8.8	1.1	chr19	58181731	58182087	(435529)	+	L1M5	LINE/L1	4061	4447	(1699)	1909056
25	28.3	2.6	4.2	chr19	58573746	58573860	(43756)	+	GA-rich	Low_complexity	1	118	(0)	1909748
15	17.9	0.0	0.0	chr19	58573838	58573869	(43747)	+	(AGAC)n	Simple_repeat	1	32	(0)	1909749
2481	28.0	6.6	7.6	chr2	1049992	1051392	(241142137)	C	L1M5	LINE/L1	(784)	5362	3977	1911846
572	29.6	12.5	3.6	chr2	1051500	1051884	(241141645)	+	MLT1F	LTR/ERVL-MaLR	44	467	(81)	1911847
290	26.5	3.8	4.7	chr2	7037760	7037866	(235155663)	C	MIR3	SINE/MIR	(6)	202	97	1919339
203	36.1	9.2	4.8	chr2	7038201	7038540	(235154989)	+	L2c	LINE/L2	3034	3363	(12)	1919340
1995	14.4	0.3	1.0	chr2	8801623	8801913	(233391616)	+	AluJb	SINE/Alu	1	289	(23)	1921890
655	33.4	11.9	3.3	chr2	8801914	8802426	(233391103)	C	L2b	LINE/L2	(193)	3182	2609	1921889
14	4.3	0.0	7.1	chr2	9207543	9207570	(232985959)	+	(CCG)n	Simple_repeat	1	28	(0)	1922561
13	20.0	2.4	2.3	chr2	9207633	9207674	(232985855)	+	(AGCTCCG)n	Simple_repeat	1	43	(0)	1922562
2463	5.0	0.0	0.0	chr2	10465269	10465565	(231727964)	C	AluY	SINE/Alu	(14)	297	1	1924807
302	36.6	5.0	2.2	chr2	10466088	10466179	(231727350)	C	MIRc	SINE/MIR	(18)	250	154	1924808
650	25.0	8.6	2.8	chr2	19710468	19710685	(222482844)	+	MamRep564	Unknown	68	299	(58)	1939189
301	29.7	8.1	1.1	chr2	19866909	19867000	(222326529)	C	MIR3	SINE/MIR	(86)	122	24	1939403
224	31.0	15.3	2.9	chr2	19867116	19867218	(222326311)	+	MIRb	SINE/MIR	35	152	(116)	1939404
1122	22.9	8.3	5.0	chr2	19867221	19867639	(222325890)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	34	1939405
1823	14.6	11.7	8.2	chr2	20361877	20362246	(221831283)	C	MSTA	LTR/ERVL-MaLR	(30)	398	1	1940223
571	28.6	8.3	2.6	chr2	20539154	20539379	(221654150)	C	MIRb	SINE/MIR	(15)	253	14	1940542
642	29.0	2.9	4.5	chr2	20585251	20585297	(221608232)	C	MIRb	SINE/MIR	(17)	251	205	1940598
2979	13.5	1.8	2.5	chr2	23535426	23535940	(218657589)	+	L1MB3	LINE/L1	5673	6183	(0)	1944499
2283	12.1	0.3	1.3	chr2	24601621	24601935	(217591594)	C	AluSx	SINE/Alu	(0)	312	1	1946428
1895	14.1	6.8	1.2	chr2	24725254	24725614	(217467915)	C	MLT1B	LTR/ERVL-MaLR	(10)	670	1	1946626
45	2.4	0.0	0.0	chr2	24725709	24725751	(217467778)	+	(GT)n	Simple_repeat	1	43	(0)	1946627
2465	8.8	0.0	0.0	chr2	25217274	25217578	(216975951)	+	AluSq2	SINE/Alu	1	305	(8)	1947544
1011	19.3	1.4	7.0	chr2	25217591	25217818	(216975711)	+	AluJr	SINE/Alu	83	297	(15)	1947545
353	25.4	7.3	10.2	chr2	25217828	25218081	(216975448)	+	L1ME4a	LINE/L1	5820	6065	(59)	1947546
13	17.7	2.5	2.4	chr2	27092696	27092708	(215100821)	+	(CCTGCTT)n	Simple_repeat	1	39	(0)	1951162
13	8.5	4.0	0.0	chr2	27092709	27092733	(215100796)	+	(CTTC)n	Simple_repeat	1	26	(0)	1951163
213	27.6	7.9	4.5	chr2	27092902	27093011	(215100518)	C	MIR1_Amn	SINE/MIR	(100)	130	17	1951164
826	16.1	0.6	3.0	chr2	27526587	27526752	(214666777)	+	L1MC3	LINE/L1	6797	6958	(827)	1951982
994	15.3	0.6	3.4	chr2	27526755	27526930	(214666599)	+	AluJb	SINE/Alu	136	306	(6)	1951978
554	23.8	4.8	2.4	chr2	27917927	27918090	(214275439)	C	L1M5	LINE/L1	(1280)	4866	4699	1952731
2389	13.8	5.6	9.3	chr2	27918083	27918593	(214274936)	C	L1MB3	LINE/L1	(0)	6183	5689	1952732
2115	23.8	11.0	3.1	chr2	27918586	27918715	(214274814)	C	L1M5	LINE/L1	(1442)	4704	4541	1952731
1829	16.1	0.4	0.7	chr2	27918716	27918989	(214274540)	C	AluJb	SINE/Alu	(39)	273	1	1952733
1155	29.1	8.7	6.5	chr2	27992714	27993086	(214200443)	+	L2a	LINE/L2	2919	3300	(126)	1952830
494	23.6	1.8	0.0	chr2	27993087	27993196	(214200333)	C	MER81	DNA/hAT-Blackjack	(1)	113	2	1952831
1155	29.1	8.7	6.5	chr2	27993197	27993318	(214200211)	+	L2a	LINE/L2	3301	3426	(0)	1952830
223	32.9	14.4	0.7	chr2	29374596	29374739	(212818790)	C	L2c	LINE/L2	(241)	3146	2980	1955209
17	11.6	0.0	0.0	chr2	31285910	31285938	(210907591)	+	(TGAA)n	Simple_repeat	1	29	(0)	1958292
8975	14.2	2.8	2.6	chr2	31453542	31456386	(210737143)	C	MER57-int	LTR/ERV1	(2012)	5176	632	1958538
2064	14.4	3.0	3.8	chr2	31729351	31729717	(210463812)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	1958815
8820	19.7	5.5	2.8	chr2	31729718	31731502	(210462027)	+	L1MA4	LINE/L1	1765	3620	(3945)	1958813
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
1801	20.8	0.3	0.3	chr2	33051136	33051433	(209142096)	+	AluJr	SINE/Alu	2	299	(13)	1961398
228	27.8	9.5	10.3	chr2	38532715	38532927	(203660602)	C	LTR78B	LTR/ERV1	(810)	486	276	1969421
2331	7.3	1.9	0.0	chr2	38665309	38665483	(203528046)	C	AluY	SINE/Alu	(4)	307	133	1969674
3348	21.7	7.8	2.2	chr2	39837449	39838429	(202355100)	C	L1PA15-16	LINE/L1	(4729)	2124	1263	1971798
2264	6.7	6.0	0.0	chr2	43769659	43769940	(198423589)	C	AluY	SINE/Alu	(11)	300	1	1978047
328	28.6	12.5	0.0	chr2	45762689	45762807	(196430722)	C	MIRb	SINE/MIR	(1)	267	132	1981218
27	0.0	0.0	0.0	chr2	45762930	45762955	(196430574)	+	(TTTCT)n	Simple_repeat	1	26	(0)	1981219
2449	6.4	0.0	1.0	chr2	45762957	45763253	(196430276)	C	AluY	SINE/Alu	(17)	294	1	1981220
183	26.7	6.2	1.6	chr2	45822172	45822232	(196371297)	+	OldhAT1	DNA/hAT-Ac	1472	1535	(1313)	1981321
1387	22.3	9.8	3.2	chr2	45865496	45865806	(196327723)	+	MLT1A1	LTR/ERVL-MaLR	1	348	(60)	1981396
1930	17.9	0.0	0.6	chr2	45865807	45866118	(196327411)	C	AluJb	SINE/Alu	(1)	311	2	1981397
225	26.8	12.6	2.8	chr2	46089069	46089283	(196104246)	+	L2a	LINE/L2	2119	2357	(1062)	1981718
17881	14.6	4.0	1.1	chr2	47127565	47129874	(195063655)	C	L1MA3	LINE/L1	(5162)	2403	21	1983400
1238	18.9	6.5	2.6	chr2	54657410	54657719	(187535810)	+	MER33	DNA/hAT-Charlie	1	323	(1)	1994653
203	30.8	19.3	2.9	chr2	55004889	55005129	(187188400)	C	L2c	LINE/L2	(187)	3200	2911	1995125
241	27.0	12.3	0.0	chr2	55005493	55005592	(187187937)	+	L1M5	LINE/L1	5521	5634	(490)	1995126
1913	18.6	0.7	0.0	chr2	55057705	55058000	(187135529)	+	AluJr4	SINE/Alu	3	300	(12)	1995202
2673	19.0	10.7	3.2	chr2	58309885	58310520	(183883009)	C	LTR48	LTR/ERV1	(37)	750	53	1999613
777	15.1	1.7	0.8	chr2	58310521	58310639	(183882890)	+	AluJr	SINE/Alu	5	124	(188)	1999614
2673	19.0	10.7	3.2	chr2	58310643	58310696	(183882833)	C	LTR48	LTR/ERV1	(735)	52	2	1999613
1801	15.5	3.0	2.4	chr2	58310713	58311042	(183882487)	+	MER57B1	LTR/ERV1	22	353	(48)	1999615
13	14.2	3.2	0.0	chr2	58709208	58709238	(183484291)	+	(AACAA)n	Simple_repeat	1	32	(0)	2000167
14	18.9	2.8	0.0	chr2	58768083	58768118	(183425411)	+	(CAA)n	Simple_repeat	1	37	(0)	2000243
196	30.9	4.0	3.0	chr2	58953612	58953711	(183239818)	C	MIR3	SINE/MIR	(4)	204	104	2000483
16	19.5	3.5	5.0	chr2	60555237	60555305	(181638224)	+	(CCG)n	Simple_repeat	1	67	(0)	2002585
15	12.2	0.0	0.0	chr2	60585540	60585566	(181607963)	+	(GCC)n	Simple_repeat	1	27	(0)	2002623
2370	13.5	9.2	0.5	chr2	60739504	60739912	(181453617)	C	MER83	LTR/ERV1	(0)	448	1	2002963
1569	15.3	0.4	2.7	chr2	60739913	60740007	(181453522)	C	AluJb	SINE/Alu	(215)	97	2	2002962
1814	17.1	1.4	0.3	chr2	60740008	60740299	(181453230)	C	AluJb	SINE/Alu	(17)	295	1	2002964
17	13.7	0.0	0.0	chr2	61017811	61017842	(181175687)	+	(CCGGGA)n	Simple_repeat	1	32	(0)	2003500
1862	18.5	1.4	0.0	chr2	61411118	61411404	(180782125)	+	AluJo	SINE/Alu	16	306	(6)	2004266
528	34.6	12.8	5.4	chr2	61411405	61411527	(180782002)	+	HAL1	LINE/L1	529	664	(1843)	2004265
1612	17.4	5.0	0.7	chr2	61524644	61524913	(180668616)	+	AluJr4	SINE/Alu	1	282	(30)	2004506
272	21.1	4.7	0.0	chr2	62506436	62506506	(179687023)	+	L1ME4a	LINE/L1	5517	5579	(545)	2006624
764	27.5	7.0	1.4	chr2	63465175	63465388	(178728141)	C	MIR	SINE/MIR	(32)	230	4	2007904
2502	20.6	5.0	1.8	chr2	63465458	63466016	(178727513)	C	MER119	DNA/hAT-Charlie	(0)	583	6	2007905
3385	13.7	5.6	0.5	chr2	63888279	63888852	(178304677)	C	MER6A	DNA/TcMar-Tigger	(0)	605	1	2008498
1561	24.4	17.5	0.5	chr2	63889034	63889584	(178303945)	C	L2a	LINE/L2	(1269)	2150	1487	2008497
19280	13.9	2.6	1.3	chr2	64350882	64353807	(177839722)	+	L1M1	LINE/L1	13	2993	(4572)	2009221
550	31.6	6.2	0.7	chr2	64505465	64505803	(177687726)	C	L1ME3E	LINE/L1	(79)	6163	5831	2009471
806	22.3	0.0	7.4	chr2	64646100	64646302	(177547227)	+	L1MC5a	LINE/L1	2586	2773	(4)	2009700
205	16.9	3.3	10.6	chr2	64727035	64727100	(177466429)	+	L2b	LINE/L2	3307	3367	(8)	2009843
26	9.8	2.2	0.0	chr2	64988911	64988955	(177204574)	+	(CCTCC)n	Simple_repeat	1	46	(0)	2010348
328	30.6	4.3	2.5	chr2	65040357	65040517	(177153012)	C	L2b	LINE/L2	(291)	3084	2921	2010450
1465	26.1	11.9	3.0	chr2	68222814	68222936	(173970593)	+	L1ME1	LINE/L1	2195	2318	(4097)	2015258
3034	23.7	10.2	2.6	chr2	68222991	68223113	(173970416)	+	L1ME1	LINE/L1	3747	3872	(2447)	2015258
2122	13.6	0.7	0.7	chr2	68223114	68223421	(173970108)	+	AluSx1	SINE/Alu	1	308	(4)	2015264
182	37.4	2.9	2.4	chr2	68441986	68442155	(173751374)	+	MIRb	SINE/MIR	47	217	(51)	2015617
5104	23.8	4.0	3.2	chr2	68900117	68902002	(173291527)	+	L1MA4	LINE/L1	16	2599	(4966)	2016246
8582	8.8	1.2	0.1	chr2	69000002	69001654	(173191875)	C	L1P3	LINE/L1	(374)	5794	4125	2016367
481	32.7	1.8	2.9	chr2	70141286	70141455	(172052074)	+	MIRb	SINE/MIR	78	245	(23)	2018485
760	22.6	5.4	10.0	chr2	72050686	72050943	(170142586)	+	MLT1D	LTR/ERVL-MaLR	16	271	(196)	2021514
756	28.4	14.8	7.5	chr2	72050947	72051100	(170142429)	C	HAL1	LINE/L1	(2041)	466	327	2021515
2256	13.1	18.4	10.0	chr2	72051101	72051702	(170141827)	+	MER4A	LTR/ERV1	1	664	(0)	2021516
23	23.1	1.1	6.5	chr2	73112883	73113011	(169080518)	+	(CCGCC)n	Simple_repeat	1	122	(0)	2023102
958	14.6	0.6	4.3	chr2	73828337	73828500	(168365029)	+	AluJo	SINE/Alu	138	295	(17)	2024273
509	27.4	8.8	0.0	chr2	74435262	74435407	(167758122)	+	MIRb	SINE/MIR	99	258	(10)	2025387
476	29.3	1.3	0.3	chr2	74785138	74785275	(167408254)	+	MIR3	SINE/MIR	17	153	(55)	2025964
219	29.8	1.7	0.0	chr2	74785554	74785610	(167407919)	C	MIRc	SINE/MIR	(185)	83	26	2025965
2609	5.1	0.0	1.3	chr2	74785714	74786028	(167407501)	C	AluY	SINE/Alu	(0)	311	1	2025966
22206	15.1	2.2	1.2	chr2	75578747	75581028	(166612501)	+	L1MA3	LINE/L1	13	2351	(5214)	2027184
703	28.5	16.7	1.6	chr2	77104494	77104998	(165088531)	+	L1M8	LINE/L1	75	682	(2309)	2029194
2795	28.9	5.2	3.8	chr2	78446200	78447548	(163745981)	C	L1M1	LINE/L1	(5080)	2485	37	2030936
249	29.4	8.6	0.0	chr2	78876365	78876449	(163317080)	C	Charlie17a	DNA/hAT-Charlie	(0)	217	125	2031541
1479	25.4	6.4	2.7	chr2	80073190	80073711	(162119818)	C	LTR55	LTR/ERVL?	(5)	543	1	2033209
185	32.1	0.0	0.0	chr2	84302969	84303024	(157890505)	C	L2b	LINE/L2	(217)	3158	3103	2038805
218	19.6	5.6	1.9	chr2	84495501	84495552	(157697977)	C	L3	LINE/CR1	(1476)	2623	2570	2039069
474	18.7	8.2	4.3	chr2	84927375	84927612	(157265917)	+	L1MCa	LINE/L1	1790	2074	(4434)	2039691
354	28.1	0.8	7.9	chr2	85067106	85067244	(157126285)	+	MIR	SINE/MIR	15	143	(119)	2040037
1686	26.2	4.2	4.9	chr2	85067294	85067796	(157125733)	+	HERV16-int	LTR/ERVL	1422	2010	(2986)	2040038
23	18.5	0.0	0.0	chr2	85133230	85133277	(157060252)	+	(GT)n	Simple_repeat	1	48	(0)	2040181
19	15.0	6.2	4.3	chr2	85133338	85133404	(157060125)	+	(CCTC)n	Simple_repeat	1	68	(0)	2040182
12	28.1	1.9	1.9	chr2	85133482	85133534	(157059995)	+	(GCCGG)n	Simple_repeat	1	54	(0)	2040183
2513	8.2	0.0	0.0	chr2	88103960	88104265	(154089264)	C	AluY	SINE/Alu	(5)	306	1	2045303
19	0.0	10.8	0.0	chr2	88104266	88104284	(154089245)	+	(ATTTCT)n	Simple_repeat	3	22	(0)	2045304
204	34.2	8.6	0.0	chr2	88104315	88104431	(154089098)	C	L2c	LINE/L2	(18)	3369	3242	2045305
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
5414	21.1	9.1	3.9	chr2	96587122	96588587	(145604942)	+	L1MD2	LINE/L1	578	2116	(4517)	2052396
239	28.9	7.8	1.8	chr2	96637905	96638061	(145555468)	C	MIRc	SINE/MIR	(72)	196	27	2052487
21	23.3	1.2	5.9	chr2	96638090	96638178	(145555351)	+	(GGCCC)n	Simple_repeat	1	84	(0)	2052488
14	28.4	0.0	1.9	chr2	96858252	96858304	(145335225)	+	(GGCGCCG)n	Simple_repeat	1	53	(0)	2052924
2332	5.8	3.6	0.3	chr2	96858451	96858745	(145334784)	C	AluSc8	SINE/Alu	(4)	307	3	2052925
182	23.1	0.0	0.0	chr2	98480989	98481027	(143712502)	C	MIRc	SINE/MIR	(117)	151	113	2055075
16	16.6	0.0	0.0	chr2	99336696	99336722	(142856807)	+	(T)n	Simple_repeat	1	27	(0)	2056309
328	23.8	0.9	0.9	chr2	99336753	99336858	(142856671)	C	L1ME3	LINE/L1	(50)	6112	6007	2056310
16	0.0	0.0	0.0	chr2	100067181	100067197	(142126332)	+	(A)n	Simple_repeat	1	17	(0)	2057348
1105	27.1	11.0	4.5	chr2	101159957	101160133	(141033396)	C	LTR82A	LTR/ERVL	(0)	872	699	2059079
1149	26.1	9.0	13.1	chr2	102502399	102503191	(139690338)	C	LTR41B	LTR/ERVL	(0)	758	2	2061161
323	18.8	1.5	0.0	chr2	103455950	103456013	(138737516)	+	MLT2B5	LTR/ERVL	1	65	(652)	2062347
2141	21.6	3.0	2.2	chr2	103456015	103456502	(138737027)	+	Ricksha_c	DNA/MULE-MuDR	414	905	(1143)	2062348
13	20.1	0.0	2.8	chr2	104873433	104873468	(137320061)	+	(GCCCG)n	Simple_repeat	1	36	(0)	2064084
16	6.9	6.5	0.0	chr2	104873528	104873558	(137319971)	+	(CACTCA)n	Simple_repeat	1	33	(0)	2064085
6476	14.4	5.1	2.2	chr2	105034095	105035134	(137158395)	C	Tigger3b	DNA/TcMar-Tigger	(26)	1205	130	2064307
28	0.0	0.0	0.0	chr2	105296757	105296783	(136896746)	+	(T)n	Simple_repeat	1	27	(0)	2064706
2044	15.4	3.8	4.1	chr2	105458505	105458708	(136734821)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	174	2064976
583	25.8	6.7	2.8	chr2	106192692	106192906	(136000623)	+	MIR	SINE/MIR	39	262	(0)	2066007
29	8.2	0.0	0.0	chr2	106582484	106582522	(135611007)	+	(A)n	Simple_repeat	1	39	(0)	2066716
1734	22.3	9.4	3.2	chr2	108356406	108356873	(133836656)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	6	2069128
24	2.5	7.0	2.2	chr2	108534653	108534695	(133658834)	+	(CGGGC)n	Simple_repeat	1	46	(0)	2069393
3361	20.3	12.7	6.4	chr2	108534908	108536013	(133657516)	C	Charlie1a	DNA/hAT-Charlie	(0)	1455	271	2069394
416	22.8	4.2	0.9	chr2	111699086	111699200	(130494329)	C	L1ME4a	LINE/L1	(205)	5919	5801	2073889
36	0.0	0.0	0.0	chr2	111699386	111699416	(130494113)	+	(AC)n	Simple_repeat	1	31	(0)	2073890
433	28.0	15.7	3.7	chr2	112720372	112720694	(129472835)	C	Tigger15a	DNA/TcMar-Tigger	(159)	556	188	2075635
2275	12.3	0.7	0.0	chr2	112753518	112753827	(129439702)	C	AluSz	SINE/Alu	(0)	312	1	2075678
344	34.5	1.5	3.0	chr2	112753828	112753889	(129439640)	+	L2a	LINE/L2	3004	3060	(359)	2075677
344	32.5	5.8	6.6	chr2	113240742	113241195	(128952334)	C	L2b	LINE/L2	(1)	3374	2925	2076473
589	29.4	3.5	0.0	chr2	117771791	117771953	(124421576)	C	MIRb	SINE/MIR	(49)	219	51	2082749
420	23.1	2.1	0.0	chr2	119255815	119255905	(122937624)	C	L2a	LINE/L2	(0)	3426	3334	2085005
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
12	12.4	8.6	0.0	chr2	119826406	119826440	(122367089)	+	A-rich	Low_complexity	1	38	(0)	2086026
896	20.2	0.9	11.6	chr2	119826442	119826682	(122366847)	+	MER20	DNA/hAT-Charlie	1	215	(4)	2086027
182	31.3	2.5	8.0	chr2	120223941	120224065	(121969464)	C	MIRc	SINE/MIR	(134)	134	17	2086607
866	29.2	4.3	3.5	chr2	122450843	122451165	(119742364)	+	L1PA17	LINE/L1	921	1444	(5491)	2090425
3337	22.0	3.2	7.6	chr2	122451208	122452197	(119741332)	+	L1PA17	LINE/L1	1572	2486	(4449)	2090425
192	26.1	1.5	3.0	chr2	127147070	127147136	(115046393)	C	L2b	LINE/L2	(216)	3171	3106	2096948
31	21.5	0.0	0.0	chr2	127387386	127387447	(114806082)	+	(AC)n	Simple_repeat	1	62	(0)	2097356
369	18.9	10.4	2.1	chr2	127455408	127455504	(114738025)	C	L1MD3	LINE/L1	(1700)	6295	6190	2097477
1259	15.8	7.2	1.4	chr2	127455528	127455736	(114737793)	C	AluJr	SINE/Alu	(89)	223	2	2097478
432	14.8	12.9	1.9	chr2	127700384	127700486	(114493043)	C	LTR33A_	LTR/ERVL	(0)	531	416	2097838
56	0.0	0.0	0.0	chr2	134450784	134450831	(107742698)	+	(GT)n	Simple_repeat	1	48	(0)	2107414
14	26.2	2.7	5.2	chr2	134460323	134460397	(107733132)	+	(CCTC)n	Simple_repeat	1	77	(0)	2107422
273	27.6	10.1	1.0	chr2	134460434	134460532	(107732997)	+	L2a	LINE/L2	3294	3402	(24)	2107423
372	34.5	3.3	3.0	chr2	143513376	143513677	(98679852)	+	L2c	LINE/L2	1782	2084	(1335)	2120155
297	27.8	0.0	9.1	chr2	144357601	144357699	(97835830)	+	L2c	LINE/L2	3280	3369	(18)	2121314
351	27.2	4.2	0.9	chr2	145013279	145013393	(97180136)	C	MIR	SINE/MIR	(21)	241	123	2122123
362	35.7	2.5	7.4	chr2	145013464	145013720	(97179809)	+	MIR	SINE/MIR	18	261	(1)	2122124
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
239	27.7	6.8	0.7	chr2	149076439	149076576	(93116953)	+	L1ME4c	LINE/L1	388	534	(296)	2127574
1413	23.6	12.8	2.3	chr2	149715260	149715692	(92477837)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	21	2128459
254	34.1	7.4	2.1	chr2	150614894	150615034	(91578495)	+	LTR33	LTR/ERVL	44	192	(323)	2129625
598	28.4	2.4	9.3	chr2	151736135	151736471	(90457058)	C	L1ME3Cz	LINE/L1	(443)	5800	5480	2131267
1348	17.3	7.4	1.6	chr2	151736489	151736821	(90456708)	+	MLT1A0	LTR/ERVL-MaLR	6	365	(0)	2131268
2266	9.7	0.0	0.0	chr2	152452922	152453200	(89740329)	+	AluSg	SINE/Alu	1	279	(31)	2132457
47	14.5	0.0	0.0	chr2	153873815	153873890	(88319639)	+	(TC)n	Simple_repeat	1	76	(0)	2134210
16	5.3	0.0	0.0	chr2	153874104	153874123	(88319406)	+	(T)n	Simple_repeat	1	20	(0)	2134211
7874	25.2	3.2	2.5	chr2	153966668	153968666	(88224863)	C	L1M1	LINE/L1	(4837)	2728	10	2134349
449	28.0	8.8	0.5	chr2	155204804	155205011	(86988518)	C	ORSL-2b	DNA/hAT-Tip100	(9)	499	273	2135909
493	24.1	3.5	2.6	chr2	155205018	155205132	(86988397)	C	LTR41B	LTR/ERVL	(128)	630	515	2135910
541	25.2	10.1	3.4	chr2	155205209	155205510	(86988019)	C	LTR41B	LTR/ERVL	(408)	350	5	2135910
4190	12.4	8.8	5.6	chr2	157385692	157386302	(84807227)	+	L1PA8A	LINE/L1	5501	6130	(1)	2138670
597	13.9	0.9	4.4	chr2	157386306	157386418	(84807111)	+	L1M1	LINE/L1	118	226	(7339)	2138672
10404	11.4	2.4	0.3	chr2	157386423	157388158	(84805371)	+	L1M1	LINE/L1	1845	3617	(3948)	2138672
17538	13.8	1.2	0.7	chr2	158154493	158155931	(84037598)	+	L1M1	LINE/L1	1376	2822	(4743)	2139768
2127	13.0	2.2	0.7	chr2	158944538	158944844	(83248685)	+	AluSz6	SINE/Alu	1	312	(0)	2140860
1873	17.2	5.7	2.8	chr2	158944845	158945130	(83248399)	C	MSTD	LTR/ERVL-MaLR	(70)	326	28	2140859
2691	15.2	0.7	0.2	chr2	160590748	160591175	(81602354)	+	MER57A1	LTR/ERV1	3	432	(0)	2143321
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
324	25.9	16.0	0.0	chr2	164826544	164826674	(77366855)	C	MIRc	SINE/MIR	(106)	162	7	2148842
6878	15.0	1.1	0.9	chr2	165416138	165417292	(76776237)	C	L1PB1	LINE/L1	(4682)	2181	1025	2149626
3612	14.4	3.6	3.9	chr2	165417294	165417986	(76775543)	C	L1PB1	LINE/L1	(6170)	693	3	2149626
3657	8.1	3.1	3.6	chr2	165583832	165584355	(76609174)	C	MER41C	LTR/ERV1	(0)	521	1	2149848
314	31.2	14.9	3.1	chr2	165904575	165904733	(76288796)	+	MIRc	SINE/MIR	7	187	(81)	2150315
202	29.8	12.3	3.9	chr2	168575091	168575234	(73618295)	+	MIR	SINE/MIR	67	228	(34)	2153769
1709	12.7	9.2	4.2	chr2	168575235	168575595	(73617934)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2153770
2121	9.9	6.8	1.1	chr2	168977597	168977955	(73215574)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	2154345
19	12.1	0.0	0.0	chr2	169029260	169029287	(73164242)	+	(T)n	Simple_repeat	1	28	(0)	2154413
16818	13.1	2.5	1.7	chr2	169085852	169088606	(73104923)	C	L1MA3	LINE/L1	(4790)	2775	1	2154475
253	31.7	2.1	0.7	chr2	169586043	169586185	(72607344)	C	Tigger15a	DNA/TcMar-Tigger	(72)	643	499	2155225
190	25.0	0.7	9.2	chr2	169586356	169586444	(72607085)	+	MIR3	SINE/MIR	106	193	(75)	2155226
287	23.9	6.4	0.0	chr2	170221996	170222083	(71971446)	C	MLT1L	LTR/ERVL-MaLR	(47)	563	470	2156307
2172	20.8	3.2	2.6	chr2	170222331	170222794	(71970735)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2156308
13469	13.0	3.3	1.7	chr2	171651724	171653108	(70540421)	C	L1MA3	LINE/L1	(5024)	2541	453	2158807
304	26.1	10.2	0.0	chr2	172038128	172038215	(70155314)	C	Tigger16b	DNA/TcMar-Tigger	(69)	267	170	2159513
315	22.3	15.4	3.2	chr2	172038219	172038343	(70155186)	+	Tigger16a	DNA/TcMar-Tigger	748	890	(67)	2159514
2331	5.8	5.5	0.3	chr2	172126897	172127189	(70066340)	C	AluY	SINE/Alu	(2)	309	1	2159657
2606	20.7	9.2	10.7	chr2	172127190	172127572	(70065957)	C	LTR41	LTR/ERVL	(343)	425	1	2159655
505	20.4	1.8	0.0	chr2	172181509	172181615	(70011914)	+	FRAM	SINE/Alu	1	117	(16)	2159764
45	2.2	0.0	0.0	chr2	172181616	172181661	(70011868)	+	(AAAAC)n	Simple_repeat	1	46	(0)	2159765
1386	8.1	0.0	1.2	chr2	172336120	172336292	(69857237)	+	AluY	SINE/Alu	1	171	(140)	2160006
941	25.6	9.7	2.6	chr2	172336496	172337112	(69856417)	+	LTR82B	LTR/ERVL	46	823	(7)	2160007
5237	15.0	3.2	0.5	chr2	172629171	172629952	(69563577)	+	LTR1E	LTR/ERV1	1	804	(0)	2160431
1167	29.7	10.5	7.8	chr2	172629953	172630315	(69563214)	C	L1ME5	LINE/L1	(510)	5684	5278	2160428
1387	28.4	9.8	4.3	chr2	173448792	173449487	(68744042)	C	LTR41B	LTR/ERVL	(2)	756	19	2161706
2212	10.6	6.3	0.6	chr2	173535027	173535385	(68658144)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2161823
376	13.8	8.0	1.2	chr2	173769584	173769664	(68423865)	+	L1MC5	LINE/L1	8972	9058	(246)	2162154
386	33.1	9.5	2.2	chr2	173806711	173806895	(68386634)	C	MIRb	SINE/MIR	(41)	227	28	2162205
297	22.5	9.7	2.9	chr2	173854493	173854597	(68338932)	C	Tigger15a	DNA/TcMar-Tigger	(561)	154	42	2162285
3992	22.4	11.0	2.4	chr2	174420136	174421403	(67772126)	+	L1MEg	LINE/L1	223	1613	(4471)	2163227
1323	27.2	5.6	2.3	chr2	174421409	174421803	(67771726)	+	LTR16B2	LTR/ERVL	54	462	(0)	2163228
478	23.7	15.4	3.3	chr2	174421809	174422144	(67771385)	+	L1MEg	LINE/L1	1645	2028	(4056)	2163227
15702	15.8	4.1	2.6	chr2	174506683	174509157	(67684372)	+	L1M1	LINE/L1	8	2296	(5269)	2163381
2023	16.4	0.0	0.0	chr2	174509158	174509449	(67684080)	+	AluJb	SINE/Alu	1	292	(20)	2163382
6795	15.9	11.8	5.0	chr2	174515541	174515930	(67677599)	C	L1MCa	LINE/L1	(5099)	1409	1023	2163394
2384	10.4	0.0	0.0	chr2	174515931	174516237	(67677292)	C	AluSx	SINE/Alu	(5)	307	1	2163398
2256	15.2	3.2	2.2	chr2	174525016	174525419	(67668110)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2163418
16	0.0	0.0	0.0	chr2	174697251	174697267	(67496262)	+	(A)n	Simple_repeat	1	17	(0)	2163703
780	14.8	2.2	2.9	chr2	174697282	174697420	(67496109)	C	MER20	DNA/hAT-Charlie	(17)	202	65	2163704
405	32.5	11.1	2.8	chr2	175806339	175806553	(66386976)	+	L2c	LINE/L2	3145	3379	(8)	2165253
425	29.1	4.1	1.4	chr2	176180350	176180490	(66013039)	+	MIRb	SINE/MIR	57	207	(61)	2165731
12	17.1	4.9	2.3	chr2	176188731	176188771	(66004758)	+	(TCCGGC)n	Simple_repeat	1	43	(0)	2165742
262	31.0	3.5	7.0	chr2	176244474	176244917	(65948612)	+	L2-3_Crp	LINE/L2	558	985	(1111)	2165834
1037	25.5	12.7	3.2	chr2	176244918	176245293	(65948236)	+	L2	LINE/L2	2210	2626	(793)	2165831
23869	7.2	1.0	0.3	chr2	176305924	176312032	(65881497)	C	L1PA6	LINE/L1	(10)	6317	181	2165934
2200	18.0	7.2	2.1	chr2	176508582	176509058	(65684471)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2166244
1627	27.3	8.6	4.7	chr2	177050302	177050963	(65142566)	+	L1MEg	LINE/L1	1	690	(5394)	2167009
1346	12.3	0.0	0.0	chr2	177206921	177207099	(64986430)	+	AluSx	SINE/Alu	125	303	(9)	2167280
933	19.5	1.2	0.0	chr2	177207394	177207562	(64985967)	+	MER45A	DNA/hAT-Tip100	5	175	(3)	2167281
17	0.0	0.0	0.0	chr2	177332417	177332435	(64861094)	+	(A)n	Simple_repeat	1	19	(0)	2167488
1711	15.7	3.9	0.0	chr2	178241794	178242111	(63951418)	+	Tigger3a	DNA/TcMar-Tigger	4	334	(14)	2168805
2254	12.9	3.5	9.2	chr2	178420433	178420891	(63772638)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2169062
1523	11.8	0.0	0.0	chr2	180139148	180139376	(62054153)	C	L1P5	LINE/L1	(331)	5820	5592	2171102
598	20.4	11.6	5.5	chr2	180662669	180662813	(61530716)	C	MER5A	DNA/hAT-Charlie	(0)	189	35	2171748
5291	13.3	1.1	1.5	chr2	180670707	180672125	(61521404)	C	L1PA16	LINE/L1	(3)	6163	4739	2171758
21936	14.3	3.3	1.7	chr2	181968015	181972166	(60221363)	C	L1MA3	LINE/L1	(3313)	4246	8	2173357
23	26.5	1.2	2.5	chr2	184598877	184598956	(57594573)	+	(CGG)n	Simple_repeat	1	81	(0)	2176766
10774	12.8	1.0	0.4	chr2	186385334	186386954	(55806575)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2178975
324	26.9	5.1	1.1	chr2	186658334	186658457	(55535072)	+	L1MEd	LINE/L1	5479	5610	(563)	2179388
571	23.9	9.3	2.8	chr2	186658466	186658676	(55534853)	+	L1ME3F	LINE/L1	5685	5910	(333)	2179391
306	29.4	6.3	2.5	chr2	186658683	186658804	(55534725)	+	L1ME3F	LINE/L1	6052	6178	(65)	2179391
450	25.8	8.5	1.6	chr2	187369620	187369804	(54823725)	C	L2a	LINE/L2	(47)	3379	3181	2180300
3283	23.4	6.8	3.7	chr2	190398341	190398856	(51794673)	+	L1MC4a	LINE/L1	6911	7422	(573)	2184307
2043	19.0	2.0	2.7	chr2	190398857	190399267	(51794262)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2184312
17	21.0	0.0	4.2	chr2	192194611	192194658	(49998871)	+	(GCG)n	Simple_repeat	1	48	(0)	2186921
21561	13.7	2.7	3.2	chr2	195975035	195980099	(46213430)	+	L1MA3	LINE/L1	17	5032	(2533)	2191729
4313	7.8	0.2	0.0	chr2	197085355	197085907	(45107622)	+	MER41A	LTR/ERV1	1	554	(0)	2193360
1514	23.2	0.8	1.6	chr2	197349495	197349858	(44843671)	+	MLT1A0	LTR/ERVL-MaLR	5	365	(0)	2193839
749	26.7	9.1	3.9	chr2	197349891	197350128	(44843401)	C	MamRep4096	DNA/hAT-Tip100	(96)	330	82	2193840
2195	9.7	4.0	0.0	chr2	197350129	197350416	(44843113)	+	AluY	SINE/Alu	1	300	(11)	2193841
12	25.3	2.4	0.0	chr2	197864346	197864387	(44329142)	+	(TTTCT)n	Simple_repeat	1	43	(0)	2194689
1965	15.4	2.7	0.0	chr2	197864481	197864772	(44328757)	C	AluJb	SINE/Alu	(12)	300	1	2194690
3324	18.4	0.4	0.2	chr2	199771829	199772371	(42421158)	C	MER44B	DNA/TcMar-Tigger	(6)	544	1	2197313
3795	29.1	8.0	5.7	chr2	199772560	199775177	(42418352)	C	ERV3-16A3_I-int	LTR/ERVL	(2564)	2662	2	2197314
415	23.9	6.6	6.9	chr2	199979642	199979815	(42213714)	+	MIRb	SINE/MIR	77	249	(19)	2197639
692	12.5	6.2	6.8	chr2	199980324	199980469	(42213060)	+	Charlie4a	DNA/hAT-Charlie	1	145	(363)	2197640
188	30.9	9.1	6.8	chr2	200048633	200048750	(42144779)	+	L2a	LINE/L2	3163	3283	(104)	2197750
14	19.9	2.4	2.3	chr2	200306622	200306663	(41886866)	+	(GGCG)n	Simple_repeat	1	43	(0)	2198136
22	24.2	2.6	6.7	chr2	200306780	200306895	(41886634)	+	(CGGCCC)n	Simple_repeat	1	119	(0)	2198137
4452	33.0	9.2	3.0	chr2	200511398	200511938	(41681591)	C	L2b	LINE/L2	(239)	3136	2600	2198453
1716	24.4	7.9	0.9	chr2	200511939	200512364	(41681165)	C	LTR16B2	LTR/ERVL	(0)	462	5	2198454
17	5.0	0.0	0.0	chr2	200713482	200713502	(41480027)	+	(T)n	Simple_repeat	1	21	(0)	2198734
12	4.2	0.0	10.0	chr2	200963841	200963870	(41229659)	+	(CCTTT)n	Simple_repeat	1	30	(0)	2199238
2587	6.2	0.3	0.0	chr2	200963976	200964283	(41229246)	+	AluSp	SINE/Alu	1	309	(4)	2199239
2766	7.8	11.4	0.2	chr2	201221304	201221701	(40971828)	+	LTR7	LTR/ERV1	1	448	(2)	2199768
183	19.4	2.7	0.0	chr2	201221870	201221905	(40971624)	+	MamRTE1	LINE/RTE-BovB	3181	3217	(595)	2199769
245	30.1	10.4	0.0	chr2	201453375	201453477	(40740052)	+	L2a	LINE/L2	3306	3420	(6)	2200076
418	33.4	13.7	4.4	chr2	201459283	201459764	(40733765)	+	L2c	LINE/L2	2329	2862	(557)	2200087
233	38.3	5.0	0.0	chr2	201459839	201459932	(40733597)	+	L2c	LINE/L2	3058	3156	(231)	2200087
20936	12.4	4.8	1.0	chr2	201463620	201466162	(40727367)	C	L1MA3	LINE/L1	(4947)	2618	14	2200088
12	22.0	4.8	0.0	chr2	201841842	201841883	(40351646)	+	(TTCTC)n	Simple_repeat	1	44	(0)	2200693
7437	13.4	3.5	2.3	chr2	202059609	202060689	(40132840)	+	L1MA4	LINE/L1	5167	6255	(45)	2201121
782	21.1	1.4	0.0	chr2	202060692	202060833	(40132696)	+	AluJr	SINE/Alu	137	280	(32)	2201124
2584	10.3	0.0	0.0	chr2	202416825	202417135	(39776394)	C	AluY	SINE/Alu	(0)	311	1	2201950
1333	10.6	0.0	0.0	chr2	202417143	202417303	(39776226)	C	AluSx1	SINE/Alu	(18)	294	134	2201951
2475	7.7	0.3	1.7	chr2	202417304	202417602	(39775927)	C	AluSp	SINE/Alu	(18)	295	1	2201952
2308	13.1	0.0	0.0	chr2	203333929	203334240	(38859289)	C	AluSz	SINE/Alu	(0)	312	1	2203802
698	25.5	6.4	3.3	chr2	203651281	203651523	(38542006)	C	MIR	SINE/MIR	(10)	252	2	2204403
19642	13.6	1.8	0.4	chr2	203758523	203760670	(38432859)	C	L1MA3	LINE/L1	(5269)	2296	143	2204595
12793	16.7	2.5	1.1	chr2	207374145	207376460	(34817069)	+	L1MA4	LINE/L1	13	2360	(5205)	2209917
3277	15.6	1.4	5.2	chr2	208092402	208092977	(34100552)	C	MLT2B3	LTR/ERVL	(0)	554	1	2211302
995	20.4	8.6	3.3	chr2	208092978	208093194	(34100335)	+	MLT1K	LTR/ERVL-MaLR	357	585	(10)	2211301
202	18.0	7.4	2.0	chr2	208466402	208466452	(33727077)	C	MamRTE1	LINE/RTE-BovB	(1635)	2177	2124	2211903
1277	15.1	1.8	10.3	chr2	208466653	208466954	(33726575)	C	L1M3	LINE/L1	(780)	5360	5085	2211900
1882	17.9	2.9	4.2	chr2	213849002	213849426	(28344103)	C	MSTB1	LTR/ERVL-MaLR	(13)	419	1	2218786
30	0.0	0.0	3.0	chr2	214515537	214515569	(27677960)	+	(ATTT)n	Simple_repeat	1	33	(0)	2219675
732	34.0	4.6	4.6	chr2	215731015	215731711	(26461818)	+	L1MEd	LINE/L1	65	761	(6342)	2221553
720	9.9	10.5	0.0	chr2	216498430	216498540	(25694989)	C	AluSg4	SINE/Alu	(186)	124	1	2222856
624	31.7	1.6	0.5	chr2	217274475	217274658	(24918871)	+	MER115	DNA/hAT-Tip100	19	204	(489)	2224152
349	32.9	0.7	4.4	chr2	217274684	217274842	(24918687)	+	MER115	DNA/hAT-Tip100	306	458	(235)	2224153
505	21.9	2.3	0.0	chr2	217274878	217275005	(24918524)	+	Zaphod	DNA/hAT-Tip100	3898	4028	(3)	2224154
231	20.0	2.0	2.0	chr2	217275008	217275058	(24918471)	+	BLACKJACK	DNA/hAT-Blackjack	7	57	(2912)	2224155
1790	12.4	4.7	2.4	chr2	218395464	218395753	(23797776)	C	AluSz6	SINE/Alu	(15)	297	1	2226032
11354	16.2	3.7	3.7	chr2	222371636	222374367	(19819162)	+	L1MA3	LINE/L1	13	3093	(4472)	2232487
1712	8.9	0.0	3.4	chr2	222709094	222709328	(19484201)	+	AluSz6	SINE/Alu	64	290	(22)	2233032
1400	19.5	5.6	1.1	chr2	224572366	224572652	(17620877)	+	AluJb	SINE/Alu	4	304	(8)	2236145
1655	17.7	3.0	6.7	chr2	224572653	224572983	(17620546)	+	MLT1A1	LTR/ERVL-MaLR	80	402	(6)	2236144
2306	10.4	0.0	0.7	chr2	225282263	225282560	(16910969)	+	AluSq2	SINE/Alu	1	296	(17)	2237269
299	37.0	9.4	6.7	chr2	225282561	225282623	(16910906)	+	L2c	LINE/L2	3328	3379	(8)	2237267
30	12.0	0.0	3.5	chr2	225282763	225282820	(16910709)	+	GA-rich	Low_complexity	1	58	(0)	2237270
11	6.7	5.4	7.7	chr2	226031344	226031380	(16162149)	+	(CCCCCTT)n	Simple_repeat	1	39	(0)	2238334
2203	11.5	0.0	7.9	chr2	227465909	227466238	(14727291)	+	AluSz6	SINE/Alu	2	305	(7)	2240561
768	22.3	9.6	12.9	chr2	227466239	227466306	(14727223)	+	MamRep4096	DNA/hAT-Tip100	360	417	(9)	2240560
216	8.6	5.4	0.0	chr2	229133340	229133374	(13060155)	+	AmnSINE1	SINE/5S-Deu-L2	129	165	(410)	2243063
973	22.1	11.1	2.4	chr2	230274250	230274666	(11918863)	+	MLT1D	LTR/ERVL-MaLR	23	492	(13)	2244954
2480	7.4	0.0	0.3	chr2	230824871	230825179	(11368350)	+	AluSp	SINE/Alu	1	308	(5)	2245745
379	34.5	1.0	3.4	chr2	231128188	231128336	(11065193)	C	L2c	LINE/L2	(18)	3369	3194	2246257
571	25.6	6.4	11.3	chr2	231182109	231182390	(11011139)	+	MamTip1	DNA/hAT-Tip100	1	267	(0)	2246365
236	36.0	0.0	0.0	chr2	232606146	232606220	(9587309)	+	MIR3	SINE/MIR	127	201	(7)	2248938
2395	5.7	1.3	2.9	chr2	232606606	232606921	(9586608)	+	AluY	SINE/Alu	1	311	(0)	2248939
186	11.7	1.2	2.4	chr2	234544585	234544910	(7648619)	+	GA-rich	Low_complexity	1	330	(0)	2252149
212	29.6	15.2	1.4	chr2	234545216	234545362	(7648167)	+	Tigger19a	DNA/TcMar-Tigger	86	256	(67)	2252150
3727	20.2	1.8	0.7	chr2	234867660	234868360	(7325169)	C	Tigger17c	DNA/TcMar-Tigger	(479)	709	1	2252681
403	24.1	5.3	3.6	chr2	234868362	234868473	(7325056)	C	MLT1H1	LTR/ERVL-MaLR	(217)	338	225	2252680
17	4.9	0.0	0.0	chr2	234868506	234868526	(7325003)	+	(TG)n	Simple_repeat	1	21	(0)	2252682
2434	8.1	1.0	1.3	chr2	234868640	234868949	(7324580)	+	AluSc	SINE/Alu	1	309	(0)	2252683
2610	8.3	0.0	0.0	chr2	236448855	236449155	(5744374)	C	AluSx	SINE/Alu	(7)	305	5	2255014
279	28.7	2.3	4.4	chr2	236449156	236449224	(5744305)	C	MER94	DNA/hAT-Blackjack	(66)	68	1	2255013
321	24.2	9.2	0.0	chr2	236449225	236449323	(5744206)	C	L2a	LINE/L2	(523)	2896	2788	2255009
253	31.8	4.9	1.7	chr2	237445392	237445567	(4747962)	C	Tigger12	DNA/TcMar-Tigger	(6)	2469	2288	2256361
276	30.6	6.9	4.3	chr2	237445565	237445704	(4747825)	C	Tigger12	DNA/TcMar-Tigger	(2099)	376	233	2256362
441	27.0	7.3	2.3	chr2	240249056	240249375	(1944154)	C	MLT1C	LTR/ERVL-MaLR	(0)	653	288	2259855
22	20.2	3.3	6.5	chr2	240435730	240435819	(1757710)	+	(CCG)n	Simple_repeat	1	93	(0)	2260045
3280	21.0	2.2	0.9	chr2	240911598	240912104	(1281425)	C	L1MB3	LINE/L1	(129)	6054	5541	2260505
4571	8.7	2.6	1.9	chr2	241525501	241526508	(667021)	+	MER11A	LTR/ERVK	1	1266	(0)	2261280
1784	19.2	1.7	3.1	chr2	241526509	241526867	(666662)	C	MSTD	LTR/ERVL-MaLR	(41)	355	2	2261279
11018	18.0	3.4	1.7	chr20	199305	201477	(64242690)	C	L1M1	LINE/L1	(5341)	2224	12	2262371
8079	17.6	4.2	3.5	chr20	219502	221307	(64222860)	+	L1M1	LINE/L1	1680	3497	(4068)	2262410
1768	14.9	3.2	0.0	chr20	362982	363249	(64080918)	C	AluJb	SINE/Alu	(29)	283	7	2262765
208	33.3	7.2	0.0	chr20	363260	363349	(64080818)	C	L2b	LINE/L2	(0)	3375	3279	2262766
18	25.7	0.0	2.1	chr20	363476	363523	(64080644)	+	(TG)n	Simple_repeat	1	48	(0)	2262767
13	19.2	2.2	4.3	chr20	710617	710661	(63733506)	+	G-rich	Low_complexity	1	46	(0)	2263571
23	18.5	2.0	1.9	chr20	711094	711144	(63733023)	+	(TG)n	Simple_repeat	1	52	(0)	2263572
21	12.4	3.5	5.0	chr20	1185780	1185837	(63258330)	+	(CTCCCCA)n	Simple_repeat	1	60	(0)	2264565
295	30.2	8.6	2.9	chr20	1186064	1186271	(63257896)	+	L2c	LINE/L2	3106	3326	(61)	2264566
12	10.7	2.9	5.7	chr20	1313562	1313595	(63130572)	+	G-rich	Low_complexity	1	35	(0)	2264789
291	26.6	7.1	4.7	chr20	1313744	1313893	(63130274)	C	Tigger18a	DNA/TcMar-Tigger	(1)	851	698	2264790
3839	18.5	8.6	9.3	chr20	1313904	1314206	(63129961)	+	L1MD2	LINE/L1	4076	4378	(1768)	2264791
307	31.4	11.2	2.0	chr20	2576135	2576384	(61867783)	C	L1M6	LINE/L1	(5673)	823	548	2267199
780	23.3	8.1	1.8	chr20	2576449	2576667	(61867500)	C	MamRep605	LTR?	(45)	804	571	2267204
2489	7.0	0.3	0.3	chr20	2870087	2870388	(61573779)	+	AluSq2	SINE/Alu	1	302	(11)	2267727
491	24.4	15.0	0.0	chr20	2870442	2870634	(61573533)	+	L2a	LINE/L2	3198	3424	(2)	2267728
270	21.9	3.2	0.0	chr20	2870624	2870697	(61573470)	C	MIR1_Amn	SINE/MIR	(96)	172	95	2267729
533	26.0	12.8	4.2	chr20	3204797	3204860	(61239307)	+	L1ME3Cz	LINE/L1	603	670	(327)	2268418
541	20.6	12.4	2.3	chr20	3651990	3652163	(60792004)	+	MLT1J2	LTR/ERVL-MaLR	1	194	(254)	2269255
2369	9.2	0.0	0.0	chr20	4027312	4027603	(60416564)	C	AluSx	SINE/Alu	(19)	293	2	2269975
428	14.3	7.2	0.0	chr20	4027615	4027691	(60416476)	C	L1PB4	LINE/L1	(8)	6148	6066	2269976
371	26.8	9.8	0.5	chr20	4835324	4835487	(59608680)	C	L2b	LINE/L2	(238)	3149	2955	2271420
51	3.9	0.0	0.0	chr20	8463147	8463199	(55980968)	+	(GT)n	Simple_repeat	1	53	(0)	2277303
654	25.8	5.9	7.1	chr20	8463297	8463605	(55980562)	C	L1ME3E	LINE/L1	(136)	6106	5802	2277304
2967	24.6	2.6	6.4	chr20	12206626	12208006	(52236161)	C	L1MB1	LINE/L1	(5153)	2364	1083	2283128
377	33.1	6.1	7.1	chr20	12208105	12208468	(52235699)	C	L1MB1	LINE/L1	(5527)	1038	679	2283128
1831	18.2	0.3	1.9	chr20	14371204	14371511	(50072656)	+	AluJr	SINE/Alu	2	304	(8)	2286320
25	21.0	0.0	4.2	chr20	17682473	17682543	(46761624)	+	G-rich	Low_complexity	1	71	(0)	2291262
18	23.9	2.2	0.0	chr20	20408751	20408795	(44035372)	+	(AT)n	Simple_repeat	1	46	(0)	2295581
708	26.2	8.9	8.2	chr20	21114074	21114476	(43329691)	+	L1ME4b	LINE/L1	478	883	(9)	2296616
21139	5.2	0.3	0.3	chr20	21479990	21483593	(42960574)	C	L1PA5	LINE/L1	(0)	6154	2546	2297164
35177	6.6	2.7	0.7	chr20	24927945	24932579	(39511588)	+	HERVE-int	LTR/ERV1	1975	6705	(1108)	2301512
4719	8.2	0.7	0.0	chr20	25188164	25188769	(39255398)	+	LTR71B	LTR/ERV1	1	610	(0)	2301820
624	27.6	22.5	1.1	chr20	25247043	25247572	(39196595)	C	LTR65	LTR/ERV1	(6)	663	14	2301898
22	24.3	0.0	1.6	chr20	25247981	25248041	(39196126)	+	(CCCGC)n	Simple_repeat	1	61	(0)	2301899
2478	11.2	0.3	0.6	chr20	25651095	25651408	(38792759)	C	AluSp	SINE/Alu	(0)	313	1	2302544
15073	16.3	2.5	3.5	chr20	25651409	25652417	(38791750)	C	L1MA4	LINE/L1	(1769)	5793	4768	2302540
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1491	18.1	6.9	4.4	chr20	32091708	32092005	(32352162)	+	AluJr	SINE/Alu	5	310	(2)	2307637
211	28.8	20.4	1.6	chr20	32092234	32092360	(32351807)	+	MIRc	SINE/MIR	27	183	(85)	2307638
202	41.3	2.1	0.7	chr20	32570379	32570517	(31873650)	C	MIRc	SINE/MIR	(126)	142	2	2308702
15	0.0	0.0	0.0	chr20	32704511	32704527	(31739640)	+	(AG)n	Simple_repeat	1	17	(0)	2309056
304	30.0	5.1	4.4	chr20	32705239	32705374	(31738793)	+	L1MCa	LINE/L1	1823	1959	(4549)	2309057
237	29.0	11.0	4.7	chr20	33286546	33286715	(31157452)	+	MIR	SINE/MIR	21	202	(60)	2310345
494	20.8	2.2	0.0	chr20	33286728	33286901	(31157266)	C	MER20	DNA/hAT-Charlie	(7)	212	2	2310346
702	24.5	1.2	0.0	chr20	33287214	33287371	(31156796)	C	LTR16C	LTR/ERVL	(37)	452	293	2310347
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
5039	16.7	7.8	3.7	chr20	34236816	34237911	(30206256)	C	L1M4c	LINE/L1	(1109)	5267	4124	2312568
343	29.5	10.7	4.8	chr20	34971283	34971492	(29472675)	C	L3b	LINE/CR1	(194)	5038	4815	2314258
293	33.3	1.9	6.7	chr20	34971629	34971792	(29472375)	+	L2	LINE/L2	2699	2854	(565)	2314259
61	9.7	0.0	0.0	chr20	35438825	35438912	(29005255)	+	(GT)n	Simple_repeat	1	88	(0)	2315263
2338	6.9	3.3	0.0	chr20	35439237	35439525	(29004642)	C	AluYj4	SINE/Alu	(11)	300	2	2315264
2050	11.1	0.4	0.0	chr20	35584517	35584823	(28859344)	C	AluSx	SINE/Alu	(0)	312	1	2315607
202	28.8	15.7	0.8	chr20	35665105	35665223	(28778944)	+	MIRb	SINE/MIR	55	194	(74)	2315758
270	29.6	16.8	2.7	chr20	36236716	36236899	(28207268)	+	MIRb	SINE/MIR	34	248	(20)	2317158
1881	15.3	10.2	2.5	chr20	36563279	36563640	(27880527)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	2317899
289	32.6	6.4	0.0	chr20	36563670	36563816	(27880351)	+	LTR85a	LTR/Gypsy?	535	691	(11)	2317900
17	17.3	0.0	5.9	chr20	36573656	36573706	(27870461)	+	(CGCGCCC)n	Simple_repeat	1	51	(0)	2317921
15	13.9	0.0	0.0	chr20	36744968	36744991	(27699176)	+	(G)n	Simple_repeat	1	24	(0)	2318336
251	27.4	0.0	0.0	chr20	36745199	36745260	(27698907)	+	MIRb	SINE/MIR	207	268	(0)	2318337
538	24.1	6.6	0.6	chr20	36745415	36745585	(27698582)	+	MIRc	SINE/MIR	27	208	(60)	2318338
621	29.1	8.2	1.3	chr20	37250774	37250999	(27193168)	+	MIR	SINE/MIR	14	256	(6)	2319575
277	39.4	3.1	0.6	chr20	37364839	37364994	(27079173)	+	L2c	LINE/L2	3023	3182	(205)	2319857
664	25.7	10.6	3.8	chr20	37365086	37365295	(27078872)	C	MIRb	SINE/MIR	(19)	249	24	2319858
342	25.0	9.2	2.6	chr20	37365296	37365319	(27078848)	C	L1ME4b	LINE/L1	(44)	848	827	2319859
638	23.4	8.8	1.2	chr20	38680289	38680457	(25763710)	+	MLT1H2	LTR/ERVL-MaLR	303	485	(4)	2322640
1836	20.6	5.9	0.3	chr20	40244981	40245365	(24198802)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2325430
208	36.3	2.9	0.6	chr20	40896134	40896302	(23547865)	C	L2b	LINE/L2	(1230)	2189	2017	2326644
495	21.9	0.0	0.0	chr20	40896784	40896902	(23547265)	+	FLAM_C	SINE/Alu	12	131	(2)	2326646
2014	23.8	8.5	0.6	chr20	41058251	41058749	(23385418)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	28	2326978
2579	5.6	0.0	0.0	chr20	41075183	41075470	(23368697)	C	AluYk3	SINE/Alu	(23)	288	1	2327003
363	24.5	0.0	2.0	chr20	41075497	41075596	(23368571)	C	L1ME4c	LINE/L1	(418)	412	315	2327004
301	28.1	7.1	6.1	chr20	41300550	41300878	(23143289)	C	L2b	LINE/L2	(142)	3245	2918	2327321
182	24.5	1.9	1.9	chr20	41301162	41301215	(23142952)	+	L2b	LINE/L2	2340	2393	(1026)	2327322
19	14.3	4.2	2.0	chr20	41618703	41618750	(22825417)	+	G-rich	Low_complexity	1	50	(0)	2327798
299	29.4	13.3	2.5	chr20	41619280	41619491	(22824676)	C	L2a	LINE/L2	(0)	3426	3141	2327799
16	26.6	2.0	1.9	chr20	43458260	43458310	(20985857)	+	(GC)n	Simple_repeat	1	52	(0)	2331218
236	31.2	1.9	3.9	chr20	44211385	44211510	(20232657)	+	MIR3	SINE/MIR	37	155	(53)	2332915
367	29.1	45.2	0.0	chr20	44678225	44678379	(19765788)	C	L2	LINE/L2	(349)	3070	2846	2334061
612	30.1	4.2	5.1	chr20	44678452	44678784	(19765383)	C	L2c	LINE/L2	(100)	3287	2958	2334062
457	28.9	4.3	0.0	chr20	44678823	44679052	(19765115)	C	L1ME3G	LINE/L1	(352)	5772	5648	2334063
768	27.1	6.5	0.0	chr20	44820483	44820685	(19623482)	+	MIRb	SINE/MIR	43	259	(9)	2334428
2058	12.5	0.7	0.0	chr20	44820873	44821153	(19623014)	+	AluSz6	SINE/Alu	4	286	(26)	2334429
230	25.0	2.0	0.0	chr20	45049980	45050027	(19394140)	+	L3	LINE/CR1	4042	4090	(9)	2334920
189	26.5	2.0	0.0	chr20	45050126	45050174	(19393993)	+	MamSINE1	SINE/tRNA-RTE	79	128	(162)	2334921
30	0.0	7.7	0.0	chr20	45834377	45834415	(18609752)	+	(CGAGGACGA)n	Simple_repeat	1	42	(0)	2336327
779	17.7	0.8	0.0	chr20	45842010	45842139	(18602028)	C	FLAM_A	SINE/Alu	(11)	131	1	2336347
904	19.9	5.3	0.5	chr20	46111247	46111443	(18332724)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	363	2336949
502	30.7	6.3	1.5	chr20	46407256	46407450	(18036717)	C	MIRb	SINE/MIR	(37)	231	27	2337608
1665	17.9	0.0	4.2	chr20	47479036	47479347	(16964820)	+	AluJo	SINE/Alu	1	299	(13)	2340216
214	30.1	4.1	1.1	chr20	47479475	47479568	(16964599)	C	MIR3	SINE/MIR	(97)	111	15	2340217
2244	10.4	0.0	1.0	chr20	47642916	47643213	(16800954)	C	AluSx1	SINE/Alu	(17)	295	1	2340568
309	21.2	1.5	0.0	chr20	47854712	47854777	(16589390)	+	LTR67B	LTR/ERVL	41	107	(513)	2340988
1153	21.7	14.5	5.2	chr20	47854897	47855342	(16588825)	C	LTR55	LTR/ERVL?	(10)	538	51	2340989
1013	19.4	8.0	0.0	chr20	48841249	48841454	(15602713)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	2342991
22	11.2	0.0	2.4	chr20	48841602	48841642	(15602525)	+	(AATG)n	Simple_repeat	1	41	(0)	2342992
15	23.1	3.0	4.4	chr20	49666550	49666615	(14777552)	+	GA-rich	Low_complexity	1	68	(0)	2345010
424	25.0	16.6	0.5	chr20	49666928	49667144	(14777023)	C	MIR	SINE/MIR	(2)	260	2	2345011
2556	4.7	0.0	3.4	chr20	49667232	49667552	(14776615)	C	AluYe5	SINE/Alu	(0)	310	1	2345012
191	32.3	1.6	0.0	chr20	49915961	49916022	(14528145)	C	MIRc	SINE/MIR	(119)	149	87	2345602
579	17.4	0.9	0.9	chr20	49916080	49916189	(14527978)	+	MIRc	SINE/MIR	47	156	(112)	2345603
32	7.8	0.0	0.0	chr20	50258481	50258521	(14185646)	+	(TG)n	Simple_repeat	1	41	(0)	2346487
383	30.5	10.7	2.3	chr20	50667779	50667949	(13776218)	+	MIRb	SINE/MIR	8	194	(74)	2347425
2276	10.2	0.3	0.0	chr20	50744103	50744407	(13699760)	C	AluSp	SINE/Alu	(1)	312	7	2347622
619	30.1	11.2	6.7	chr20	50744408	50745057	(13699110)	+	L2c	LINE/L2	2730	3381	(6)	2347621
14	25.9	0.0	0.0	chr20	51512808	51512849	(12931318)	+	A-rich	Low_complexity	1	42	(0)	2349282
350	15.7	4.0	1.3	chr20	52340174	52340248	(12103919)	+	MLT1J	LTR/ERVL-MaLR	105	177	(385)	2351302
510	23.8	3.9	0.0	chr20	52340421	52340567	(12103600)	+	LTR16A	LTR/ERVL	290	442	(9)	2351303
429	27.4	13.0	10.6	chr20	56714564	56714988	(7729179)	C	L1MD2	LINE/L1	(424)	5935	5502	2359678
2545	6.2	0.3	1.0	chr20	58370204	58370512	(6073655)	+	AluSq2	SINE/Alu	2	308	(5)	2362815
322	39.7	0.7	0.7	chr20	58421085	58421231	(6022936)	+	MIRc	SINE/MIR	22	168	(100)	2362909
1054	20.9	4.9	0.8	chr20	58791538	58791793	(5652374)	C	Charlie5	DNA/hAT-Charlie	(124)	2500	2234	2363464
201	34.1	2.4	0.0	chr20	59675509	59675590	(4768577)	C	MIRb	SINE/MIR	(138)	130	47	2364851
1040	17.3	3.0	0.0	chr20	59675617	59675813	(4768354)	+	MER20	DNA/hAT-Charlie	17	219	(0)	2364852
2070	14.0	0.0	1.0	chr20	62089156	62089455	(2354712)	C	AluJo	SINE/Alu	(15)	297	1	2368105
4296	15.7	5.7	10.7	chr20	62089456	62089949	(2354218)	+	Tigger3b	DNA/TcMar-Tigger	294	767	(464)	2368103
32	7.3	0.0	0.0	chr20	62645439	62645481	(1798686)	+	(GGTGAG)n	Simple_repeat	1	43	(0)	2368790
32	11.8	0.0	1.8	chr20	62645485	62645541	(1798626)	+	(CACCCT)n	Simple_repeat	1	57	(0)	2368791
13	16.0	2.7	2.6	chr20	63538166	63538202	(905965)	+	(CCTCCAG)n	Simple_repeat	1	38	(0)	2369685
223	30.1	10.6	2.1	chr20	63557233	63557422	(886745)	+	L2c	LINE/L2	3106	3313	(74)	2369702
674	15.4	7.9	14.2	chr20	63859746	63859799	(584368)	+	MER53	DNA/hAT	1	30	(163)	2370141
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
16	11.7	0.0	0.0	chr21	15064946	15064973	(31645010)	+	(CGC)n	Simple_repeat	1	28	(0)	2378615
1018	19.6	8.6	1.9	chr21	16047135	16047375	(30662608)	C	MLT1A0	LTR/ERVL-MaLR	(104)	261	1	2379941
22133	9.7	1.9	1.1	chr21	16224330	16230705	(30479278)	+	L1PA7	LINE/L1	1	6464	(5)	2380168
14	18.4	3.6	5.3	chr21	16504252	16504306	(30205677)	+	(ATTATTA)n	Simple_repeat	1	57	(0)	2380516
3901	14.2	9.2	4.5	chr21	23452489	23453279	(23256704)	C	LTR13	LTR/ERVK	(167)	840	9	2389662
22437	12.7	3.0	3.2	chr21	26332171	26334427	(20375556)	+	L1MA3	LINE/L1	10	2320	(5245)	2393858
12071	19.4	3.0	1.2	chr21	30604878	30607171	(16102812)	+	L1M1	LINE/L1	9	2346	(5219)	2400002
12	11.9	0.0	6.5	chr21	31558175	31558205	(15151778)	+	(GCGCA)n	Simple_repeat	1	31	(0)	2401593
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
2399	5.3	0.0	0.7	chr21	32601289	32601596	(14108387)	C	AluY	SINE/Alu	(0)	311	1	2403494
428	30.4	6.9	7.2	chr21	33451286	33451618	(13258365)	C	L2c	LINE/L2	(1)	3386	3055	2405006
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
20	26.4	2.5	2.4	chr21	33588685	33588764	(13121219)	+	(CCCCCG)n	Simple_repeat	1	82	(0)	2405244
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
13	27.3	0.0	3.6	chr21	33642812	33642867	(13067116)	+	(CGCCCCG)n	Simple_repeat	1	56	(0)	2405361
57	37.2	1.6	3.3	chr21	36700209	36700591	(10009392)	+	(TTCT)n	Simple_repeat	1	389	(0)	2410358
236	30.5	1.4	19.3	chr21	37095712	37095846	(9614137)	C	MamTip2	DNA/hAT-Tip100	(26)	279	169	2411007
16	21.1	2.6	0.0	chr21	38806814	38806851	(7903132)	+	(TG)n	Simple_repeat	1	39	(0)	2413545
1285	27.7	11.1	1.8	chr21	39182006	39182630	(7527353)	+	L1MC5a	LINE/L1	1920	2610	(167)	2414123
3785	13.6	3.8	3.1	chr21	39381641	39381753	(7328230)	C	L1MB3	LINE/L1	(2)	6181	6071	2414488
1882	15.8	2.3	0.3	chr21	39518093	39518396	(7191587)	+	AluJo	SINE/Alu	1	310	(2)	2414740
261	28.4	5.7	4.5	chr21	39518723	39518877	(7191106)	+	MER124	DNA?	186	342	(55)	2414741
483	22.2	5.8	4.1	chr21	41121870	41122038	(5587945)	+	LTR41B	LTR/ERVL	2	173	(585)	2416991
444	26.5	1.7	5.0	chr21	41122297	41122339	(5587644)	+	LTR41B	LTR/ERVL	586	628	(130)	2416991
7374	2.0	1.0	0.1	chr21	44486764	44487935	(2222048)	C	L1PA3	LINE/L1	(0)	6155	4976	2421817
15851	11.0	2.4	0.5	chr21	44487936	44490230	(2219753)	+	HUERS-P2-int	LTR/ERV1	749	3088	(0)	2421816
794	29.6	4.8	0.9	chr21	44687356	44687699	(2022284)	+	L1ME2z	LINE/L1	5714	6071	(373)	2422029
345	30.2	9.3	0.5	chr21	44687876	44688081	(2021902)	+	L1ME2z	LINE/L1	6219	6444	(0)	2422029
11	21.8	2.2	4.3	chr21	44801596	44801641	(1908342)	+	(GCCCCA)n	Simple_repeat	1	47	(0)	2422172
501	22.1	2.6	3.2	chr21	45295709	45295862	(1414121)	C	MLT1A	LTR/ERVL-MaLR	(15)	359	207	2422712
397	19.3	1.1	2.2	chr21	45295848	45295937	(1414046)	C	MLT1A	LTR/ERVL-MaLR	(285)	89	1	2422712
569	32.2	14.5	5.2	chr21	45295943	45296797	(1413186)	C	L1M5	LINE/L1	(1135)	5011	4049	2422713
6541	12.7	4.3	1.3	chr21	46143385	46144361	(565622)	+	LTR13	LTR/ERVK	1	1007	(0)	2423545
197	18.1	2.7	4.3	chr21	46144362	46144774	(565209)	+	(CTCC)n	Simple_repeat	4	412	(0)	2423546
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1813	13.8	0.7	5.5	chr22	17400755	17401066	(33417402)	C	AluJo	SINE/Alu	(15)	297	1	2428923
503	20.3	4.2	9.8	chr22	17740161	17740291	(33078177)	+	L2a	LINE/L2	3283	3408	(18)	2429659
1409	18.8	0.3	9.1	chr22	17740292	17740432	(33078036)	+	AluJr	SINE/Alu	1	125	(187)	2429660
2383	6.8	1.0	0.0	chr22	17740433	17740726	(33077742)	C	AluSx1	SINE/Alu	(15)	297	1	2429661
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
39	25.1	3.8	4.7	chr22	18970299	18970483	(31847985)	+	(GCCCGC)n	Simple_repeat	1	192	(0)	2431244
18	26.3	1.7	7.7	chr22	18970462	18970576	(31847892)	+	G-rich	Low_complexity	1	117	(0)	2431245
206	36.6	1.0	7.3	chr22	19115610	19115718	(31702750)	C	L2a	LINE/L2	(3)	3423	3322	2431470
482	23.8	20.5	3.8	chr22	19115944	19116153	(31702315)	C	MIR	SINE/MIR	(7)	255	2	2431471
2439	19.5	6.1	0.5	chr22	19273424	19273961	(31544507)	+	MER90a	LTR/ERV1	5	614	(0)	2431706
352	31.4	10.4	1.1	chr22	19412936	19413146	(31405322)	C	L2b	LINE/L2	(191)	3184	2945	2431950
203	29.6	3.9	6.7	chr22	19413280	19413384	(31405084)	+	MIRb	SINE/MIR	1	102	(166)	2431951
19	3.5	3.5	0.0	chr22	19413385	19413413	(31405055)	+	(ATTTT)n	Simple_repeat	1	30	(0)	2431952
38	0.0	0.0	0.0	chr22	19413596	19413630	(31404838)	+	(TATT)n	Simple_repeat	1	35	(0)	2431953
200	31.5	5.2	2.3	chr22	19975025	19975154	(30843314)	+	L2b	LINE/L2	2959	3092	(283)	2432765
312	30.1	6.7	3.2	chr22	20017199	20017356	(30801112)	C	MIRb	SINE/MIR	(17)	251	88	2432796
4517	8.1	3.3	0.5	chr22	20035826	20036418	(30782050)	+	LTR71B	LTR/ERV1	1	610	(0)	2432819
12	8.1	3.6	3.5	chr22	20137371	20137398	(30681070)	+	(CAGG)n	Simple_repeat	1	29	(0)	2432951
205	33.7	0.0	0.9	chr22	20394683	20394759	(30423709)	C	MIRc	SINE/MIR	(72)	158	84	2433233
2082	10.9	2.7	1.0	chr22	20394760	20395052	(30423416)	C	AluSz	SINE/Alu	(14)	298	1	2433234
3115	15.7	7.6	1.3	chr22	20479726	20480362	(30338106)	+	L1MB2	LINE/L1	5490	6170	(1)	2433393
233	30.9	14.0	1.7	chr22	20480370	20480550	(30337918)	+	L1MC5a	LINE/L1	488	694	(2083)	2433394
612	28.0	7.1	3.5	chr22	20480569	20480827	(30337641)	C	MER46C	DNA/TcMar-Tigger	(0)	338	70	2433395
3854	19.6	6.8	1.3	chr22	21712805	21713750	(29104718)	+	L1MB3	LINE/L1	5169	6177	(6)	2435735
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
787	16.8	2.7	0.0	chr22	22049413	22049555	(28768913)	+	L1MB1	LINE/L1	5934	6080	(88)	2436421
352	31.6	2.2	2.2	chr22	23270273	23270411	(27548057)	+	MER103C	DNA/hAT-Charlie	19	157	(140)	2438031
219	28.1	20.0	0.0	chr22	23568881	23568976	(27249492)	+	MIRc	SINE/MIR	9	128	(140)	2438506
229	27.6	14.6	0.2	chr22	23569068	23569199	(27249269)	C	MIRb	SINE/MIR	(48)	160	12	2438507
980	14.7	11.4	16.0	chr22	23716636	23716802	(27101666)	+	AluJr	SINE/Alu	134	300	(12)	2438790
257	32.3	11.3	4.0	chr22	25014006	25014282	(25804186)	+	L1M5	LINE/L1	5588	5887	(237)	2441246
2342	7.0	0.0	0.0	chr22	25400263	25400562	(25417906)	C	AluY	SINE/Alu	(10)	301	2	2442121
21	24.4	5.1	1.2	chr22	27919212	27919290	(22899178)	+	(GCC)n	Simple_repeat	1	83	(0)	2447727
40	0.0	0.0	0.0	chr22	27981231	27981267	(22837201)	+	(T)n	Simple_repeat	1	37	(0)	2447836
305	20.0	0.0	3.0	chr22	28773181	28773247	(22045221)	C	MIR	SINE/MIR	(118)	144	80	2449172
199	23.1	0.0	0.0	chr22	28773421	28773459	(22045009)	+	MIRb	SINE/MIR	191	229	(39)	2449173
518	19.1	0.0	0.0	chr22	28829377	28829481	(21988987)	C	Charlie18a	DNA/hAT-Charlie	(168)	174	70	2449317
184	30.8	21.6	0.0	chr22	29245792	29245882	(21572586)	C	MIR3	SINE/MIR	(60)	148	33	2450195
579	29.8	16.7	3.1	chr22	29245894	29246575	(21571893)	C	L2b	LINE/L2	(11)	3364	2557	2450196
203	31.4	10.8	0.8	chr22	29266370	29266494	(21551974)	+	MIRb	SINE/MIR	121	259	(9)	2450243
2107	5.5	2.9	0.0	chr22	29602675	29602947	(21215521)	+	AluSp	SINE/Alu	1	281	(32)	2450972
44	2.2	0.0	2.0	chr22	29602950	29602998	(21215470)	+	(AAT)n	Simple_repeat	1	49	(0)	2450973
248	35.2	9.6	4.5	chr22	29958466	29958800	(20859668)	+	L2c	LINE/L2	2965	3338	(49)	2451716
17	25.9	3.3	0.0	chr22	30196446	30196505	(20621963)	+	(CGCCAT)n	Simple_repeat	1	62	(0)	2452112
2266	9.8	0.6	2.2	chr22	30693682	30693997	(20124471)	+	AluSx1	SINE/Alu	1	311	(1)	2453197
249	27.4	20.4	0.0	chr22	30694008	30694124	(20124344)	C	Charlie4z	DNA/hAT-Charlie	(7)	160	14	2453198
31	6.0	0.0	6.7	chr22	30968842	30968901	(19849567)	+	(GCC)n	Simple_repeat	1	60	(0)	2453682
393	14.7	6.8	2.9	chr22	30997114	30997183	(19821285)	C	MER66B	LTR/ERV1	(139)	347	275	2453730
24	6.1	2.9	0.0	chr22	30997211	30997244	(19821224)	+	(GT)n	Simple_repeat	1	35	(0)	2453731
2189	10.9	0.0	0.0	chr22	31061874	31062156	(19756312)	C	AluSz	SINE/Alu	(29)	283	1	2453923
639	28.9	0.0	4.4	chr22	31062237	31062439	(19756029)	C	MIRb	SINE/MIR	(72)	196	3	2453924
1144	12.5	0.0	1.2	chr22	31293194	31293355	(19525113)	C	AluY	SINE/Alu	(151)	160	1	2454451
30	0.0	0.0	0.0	chr22	31293416	31293448	(19525020)	+	(A)n	Simple_repeat	1	33	(0)	2454452
2164	8.0	1.4	5.0	chr22	31293943	31294244	(19524224)	C	AluSx	SINE/Alu	(21)	291	1	2454453
2405	7.5	0.3	3.1	chr22	31824687	31825005	(18993463)	+	AluY	SINE/Alu	2	311	(0)	2455723
845	27.9	9.9	3.3	chr22	32684098	32684493	(18133975)	+	MLT1K	LTR/ERVL-MaLR	171	595	(0)	2457501
462	27.9	6.7	1.3	chr22	32806515	32806670	(18011798)	+	MIRb	SINE/MIR	3	167	(101)	2457748
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
49	0.0	0.0	0.0	chr22	35850194	35850235	(14968233)	+	(AC)n	Simple_repeat	1	42	(0)	2463842
437	36.6	0.8	5.7	chr22	36855994	36856239	(13962229)	+	MIRb	SINE/MIR	29	262	(6)	2466011
280	34.9	0.9	0.9	chr22	36856164	36856270	(13962198)	C	MIRb	SINE/MIR	(0)	268	162	2466012
1212	30.6	11.8	5.0	chr22	36950831	36952218	(13866250)	C	L2	LINE/L2	(535)	2884	1390	2466174
300	17.3	8.5	0.0	chr22	37449158	37449241	(13369227)	C	MIR3	SINE/MIR	(92)	176	89	2467262
11	27.1	2.3	0.0	chr22	37449430	37449473	(13368995)	+	G-rich	Low_complexity	1	45	(0)	2467263
381	28.3	9.9	2.7	chr22	37636958	37637106	(13181362)	+	MIRb	SINE/MIR	14	174	(94)	2467702
239	25.7	5.4	0.0	chr22	37894703	37894772	(12923696)	+	MIR3	SINE/MIR	128	201	(7)	2468343
377	22.9	6.9	0.0	chr22	38099887	38100008	(12718460)	+	Charlie22a	DNA/hAT-Charlie	77	207	(284)	2468793
653	28.3	12.5	2.2	chr22	38261923	38262330	(12556138)	+	L1ME3	LINE/L1	5619	6074	(88)	2469128
328	26.5	9.3	7.0	chr22	38655784	38655941	(12162527)	+	MIRc	SINE/MIR	5	166	(102)	2470027
216	31.3	8.2	7.4	chr22	38655927	38656047	(12162421)	+	MIRb	SINE/MIR	26	147	(121)	2470028
768	25.9	7.6	10.5	chr22	39267603	39268106	(11550362)	C	L1ME4a	LINE/L1	(15)	6109	5622	2471242
208	31.4	3.0	0.0	chr22	39268166	39268238	(11550230)	C	MIR3	SINE/MIR	(77)	153	74	2471243
994	14.5	1.4	0.0	chr22	39523994	39524165	(11294303)	C	AluSx1	SINE/Alu	(0)	312	136	2471819
230	17.2	13.4	0.0	chr22	39524187	39524244	(11294224)	C	MIR	SINE/MIR	(187)	75	9	2471820
209	24.2	3.2	10.8	chr22	39524504	39524605	(11293863)	C	MIR3	SINE/MIR	(13)	195	102	2471821
316	27.2	13.6	1.5	chr22	39524718	39524973	(11293495)	+	L2a	LINE/L2	2932	3393	(33)	2471822
785	31.9	5.4	3.2	chr22	40087379	40087845	(10730623)	C	L2c	LINE/L2	(0)	3387	2910	2472862
2282	11.0	0.0	0.0	chr22	40302353	40302651	(10515817)	+	AluSg	SINE/Alu	1	299	(11)	2473307
376	22.1	2.6	6.6	chr22	40302758	40302878	(10515590)	+	Charlie2a	DNA/hAT-Charlie	34	149	(2712)	2473308
29	0.0	0.0	0.0	chr22	40303022	40303048	(10515420)	+	(CTT)n	Simple_repeat	1	27	(0)	2473309
1966	10.5	8.0	0.0	chr22	40303049	40303325	(10515143)	C	AluSx	SINE/Alu	(11)	301	1	2473310
1861	14.0	3.4	1.4	chr22	40476454	40476745	(10341723)	C	AluJb	SINE/Alu	(8)	304	7	2473630
568	29.3	15.0	4.6	chr22	40634409	40634712	(10183756)	+	L2c	LINE/L2	3047	3387	(0)	2473969
1675	20.1	10.2	0.8	chr22	40902699	40903069	(9915399)	C	MER68C	LTR/ERVL	(9)	410	1	2474609
264	28.9	8.1	0.0	chr22	40903233	40903391	(9915077)	C	L3	LINE/CR1	(302)	3797	3625	2474610
15	13.5	0.0	10.0	chr22	41448444	41448493	(9369975)	+	(CCCCCT)n	Simple_repeat	1	50	(0)	2475930
12	18.4	7.7	0.0	chr22	41448469	41448507	(9369961)	+	(CCTTC)n	Simple_repeat	1	42	(0)	2475931
427	23.7	16.6	6.4	chr22	41448756	41448895	(9369573)	+	MIRb	SINE/MIR	56	212	(56)	2475932
32	5.3	0.0	0.0	chr22	41544351	41544389	(9274079)	+	(CGCCA)n	Simple_repeat	1	39	(0)	2476153
22	17.4	5.2	0.0	chr22	41544391	41544448	(9274020)	+	(CGCACCA)n	Simple_repeat	1	61	(0)	2476154
219	32.2	4.8	2.5	chr22	41544685	41544805	(9273663)	+	L2	LINE/L2	2721	2844	(575)	2476155
331	31.9	10.8	0.7	chr22	43264197	43264338	(7554130)	+	MIRb	SINE/MIR	36	193	(75)	2479899
3483	29.1	8.2	3.8	chr22	43378380	43378985	(7439483)	+	L1MEd	LINE/L1	282	909	(6194)	2480124
316	27.9	12.0	5.5	chr22	43385994	43386156	(7432312)	+	MIRb	SINE/MIR	52	226	(42)	2480137
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
346	24.3	12.6	2.6	chr22	43954268	43954381	(6864087)	C	MIRc	SINE/MIR	(38)	230	104	2481084
181	30.5	5.4	9.5	chr22	43954831	43954946	(6863522)	C	MIR	SINE/MIR	(15)	247	137	2481085
21	12.8	2.2	2.2	chr22	45024383	45024427	(5794041)	+	(AATA)n	Simple_repeat	1	46	(0)	2483073
196	26.8	6.8	5.8	chr22	45024527	45024613	(5793855)	+	L2a	LINE/L2	3327	3414	(12)	2483074
389	27.6	13.0	1.3	chr22	45159633	45159824	(5658644)	C	MIRb	SINE/MIR	(15)	247	34	2483383
63	24.9	1.3	5.1	chr22	45240833	45241075	(5577393)	+	(CGCCC)n	Simple_repeat	1	233	(0)	2483504
188	27.0	1.3	6.3	chr22	45241439	45241517	(5576951)	+	MIRc	SINE/MIR	118	192	(76)	2483505
297	34.9	3.3	8.2	chr22	45275428	45275525	(5542943)	C	L2c	LINE/L2	(536)	2883	2791	2483594
241	30.2	1.1	3.4	chr22	45316746	45316834	(5501634)	C	MIR	SINE/MIR	(10)	252	166	2483690
1981	13.8	0.3	1.0	chr22	45317099	45317394	(5501074)	+	AluSq2	SINE/Alu	5	298	(15)	2483691
401	28.1	14.7	3.0	chr22	45927920	45928082	(4890386)	+	MLT1D	LTR/ERVL-MaLR	193	387	(118)	2484748
368	35.2	1.4	1.4	chr22	45968122	45968262	(4850206)	+	L2b	LINE/L2	3047	3187	(188)	2484812
22	10.5	0.0	0.0	chr22	46072958	46072988	(4745480)	+	(T)n	Simple_repeat	1	31	(0)	2484974
1301	9.8	0.0	0.0	chr22	46200936	46201098	(4617370)	+	AluSz	SINE/Alu	5	167	(145)	2485177
302	6.7	0.0	0.0	chr22	46201099	46201143	(4617325)	+	Alu	SINE/Alu	256	300	(1)	2485178
211	24.3	2.6	5.1	chr22	46201145	46201222	(4617246)	C	MIR	SINE/MIR	(156)	106	31	2485179
204	29.9	13.2	1.8	chr22	46575416	46575643	(4242825)	C	L2c	LINE/L2	(212)	3175	2918	2485756
1349	12.2	1.0	1.5	chr22	47607829	47608025	(3210443)	C	AluSc8	SINE/Alu	(10)	301	106	2487111
1489	9.9	1.3	0.0	chr22	47769497	47769719	(3048749)	C	L1MA2	LINE/L1	(0)	6304	6079	2487343
1789	16.7	1.0	1.0	chr22	49414541	49414833	(1403635)	C	AluJb	SINE/Alu	(19)	293	1	2489339
3887	16.2	2.7	4.2	chr22	50121806	50121960	(696508)	C	L1MEc	LINE/L1	(1379)	4934	4782	2490222
866	13.1	0.0	0.8	chr22	50121961	50122090	(696378)	C	FLAM_C	SINE/Alu	(14)	129	1	2490223
3887	16.2	2.7	4.2	chr22	50122091	50122723	(695745)	C	L1MEc	LINE/L1	(1532)	4781	4154	2490222
17	17.7	0.0	0.0	chr22	50526098	50526135	(292333)	+	(CAGCGC)n	Simple_repeat	1	38	(0)	2490809
14	24.1	8.1	2.1	chr22	50526145	50526230	(292238)	+	G-rich	Low_complexity	1	93	(0)	2490810
7872	18.7	10.2	4.2	chr22	50691364	50692266	(126202)	C	L1MB5	LINE/L1	(2126)	4020	3073	2491084
380	25.4	5.1	0.8	chr3	4976236	4976366	(193319193)	+	MER91C	DNA/hAT-Tip100	1	137	(3)	2499889
392	26.2	7.6	4.3	chr3	4976371	4976538	(193319021)	+	MIRb	SINE/MIR	16	191	(17)	2499890
283	28.3	0.0	3.2	chr3	8589787	8589881	(189705678)	+	L2b	LINE/L2	3274	3403	(23)	2505637
330	30.8	14.8	2.5	chr3	9078839	9078998	(189216561)	C	MIR3	SINE/MIR	(6)	202	20	2506437
1104	12.4	14.0	0.5	chr3	9750642	9750826	(188544733)	C	AluJb	SINE/Alu	(14)	298	85	2507865
262	29.2	8.7	6.8	chr3	9907864	9908010	(188387549)	+	MIR	SINE/MIR	99	248	(14)	2508228
1360	18.9	14.6	0.3	chr3	10306198	10306599	(187988960)	C	L1MC5	LINE/L1	(5)	2986	2531	2509159
2062	13.3	4.9	2.3	chr3	10306600	10306953	(187988606)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2509160
766	31.5	2.5	2.1	chr3	10856388	10856624	(187438935)	C	MIRb	SINE/MIR	(12)	256	19	2510252
15	30.0	2.6	2.5	chr3	12159252	12159328	(186136231)	+	(ACAG)n	Simple_repeat	1	79	(0)	2512783
2376	10.9	0.0	0.0	chr3	12159761	12160072	(186135487)	+	AluSx	SINE/Alu	1	312	(0)	2512784
362	28.4	9.2	8.7	chr3	12280110	12280381	(186015178)	C	L2c	LINE/L2	(2)	3385	3103	2512997
619	17.8	7.9	1.1	chr3	12280846	12281021	(186014538)	+	L1MC5	LINE/L1	9107	9295	(9)	2512998
3700	13.0	6.9	0.2	chr3	12549907	12550515	(185745044)	+	L1MC1	LINE/L1	5453	6105	(228)	2513507
376	11.7	0.0	5.0	chr3	12550517	12550576	(185744983)	+	AluJr4	SINE/Alu	87	143	(169)	2513508
1677	11.6	0.4	0.4	chr3	12550569	12550810	(185744749)	+	MER50	LTR/ERV1	493	734	(0)	2513509
325	33.5	9.4	5.2	chr3	12682488	12682524	(185613035)	C	L2c	LINE/L2	(369)	3018	2984	2513814
547	26.5	13.2	5.8	chr3	12682671	12682915	(185612644)	+	MLT1K	LTR/ERVL-MaLR	76	349	(246)	2513816
2565	4.3	1.3	0.3	chr3	12762883	12763182	(185532377)	+	AluY	SINE/Alu	2	304	(7)	2514047
214	23.3	0.0	0.0	chr3	12763189	12763231	(185532328)	+	MIR	SINE/MIR	218	260	(2)	2514048
6171	10.4	6.3	1.0	chr3	12867827	12868729	(185426830)	+	LTR13_	LTR/ERVK	1	954	(0)	2514258
430	28.2	5.3	7.3	chr3	12890466	12890737	(185404822)	C	L1MC4	LINE/L1	(3680)	2535	2270	2514281
355	27.3	12.3	0.0	chr3	14391672	14391799	(183903760)	+	MIRb	SINE/MIR	108	253	(15)	2516849
2325	10.7	0.3	0.0	chr3	14391901	14392210	(183903349)	+	AluSp	SINE/Alu	1	311	(2)	2516850
215	31.2	0.0	0.0	chr3	15285088	15285151	(183010408)	+	L2a	LINE/L2	3358	3421	(5)	2518488
976	18.4	0.0	0.0	chr3	17528077	17528223	(180767336)	C	AluJb	SINE/Alu	(29)	283	137	2521982
1944	19.1	1.1	0.6	chr3	17528224	17528575	(180766984)	+	MLT1A1	LTR/ERVL-MaLR	55	408	(0)	2521981
17246	17.4	3.6	2.1	chr3	19029103	19033353	(179262206)	+	L1MA3	LINE/L1	12	4719	(2846)	2524129
12	25.6	0.0	6.9	chr3	19146921	19146978	(179148581)	+	(CCGCC)n	Simple_repeat	1	58	(0)	2524271
15	20.4	7.8	1.4	chr3	23590178	23590243	(174705316)	+	(TGATTT)n	Simple_repeat	1	70	(0)	2530352
34	0.0	0.0	0.0	chr3	23785297	23785325	(174510234)	+	(CA)n	Simple_repeat	1	29	(0)	2530767
470	25.3	10.0	2.4	chr3	23785641	23785806	(174509753)	C	L2a	LINE/L2	(42)	3384	3205	2530768
197	34.6	7.8	0.0	chr3	24502078	24502184	(173793375)	+	MIR3	SINE/MIR	79	194	(14)	2531979
496	36.2	6.4	3.3	chr3	24982725	24982998	(173312561)	+	MER20B	DNA/hAT-Charlie	1	283	(500)	2532715
1661	21.2	7.0	5.3	chr3	27625844	27626395	(170669164)	+	MLT1E1A	LTR/ERVL-MaLR	2	670	(10)	2536483
13970	13.3	2.3	4.0	chr3	28872377	28875342	(169420217)	C	L1M1	LINE/L1	(2852)	4713	1757	2538408
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
49	27.8	0.0	0.0	chr3	29281115	29281236	(169014323)	+	(TTTT)n	Simple_repeat	1	122	(0)	2538965
1437	29.4	7.9	2.1	chr3	30170340	30170993	(168124566)	C	LTR82A	LTR/ERVL	(171)	701	7	2540176
187	29.3	0.0	9.6	chr3	30171007	30171089	(168124470)	+	L2c	LINE/L2	3304	3378	(9)	2540175
253	34.9	14.1	0.7	chr3	30171140	30171286	(168124273)	C	MIRc	SINE/MIR	(70)	198	29	2540177
545	29.0	13.1	0.3	chr3	32246173	32246466	(166049093)	+	LTR33	LTR/ERVL	1	337	(178)	2543507
24	17.9	3.5	0.0	chr3	32347254	32347310	(165948249)	+	(TTTGT)n	Simple_repeat	1	59	(0)	2543706
426	25.9	1.4	2.1	chr3	32347683	32347824	(165947735)	C	HAL1	LINE/L1	(677)	1830	1690	2543705
12	26.8	0.0	0.0	chr3	32502546	32502585	(165792974)	+	(CCCGAG)n	Simple_repeat	1	40	(0)	2543989
17	12.3	0.0	5.1	chr3	32502871	32502910	(165792649)	+	(CCGCC)n	Simple_repeat	1	37	(0)	2543990
17	5.0	0.0	0.0	chr3	33718540	33718560	(164576999)	+	(A)n	Simple_repeat	1	21	(0)	2546319
2490	22.1	7.4	1.1	chr3	33718641	33719298	(164576261)	C	L1ME2	LINE/L1	(18)	6146	5444	2546320
1234	20.5	20.7	1.1	chr3	35908182	35908622	(162386937)	+	LTR55	LTR/ERVL?	1	537	(11)	2549257
352	32.6	8.5	1.5	chr3	36207628	36207823	(162087736)	+	MIRc	SINE/MIR	44	254	(14)	2549607
2375	9.2	0.3	0.3	chr3	37855077	37855380	(160440179)	C	AluSz	SINE/Alu	(8)	304	1	2552179
15	24.3	0.0	0.0	chr3	38004440	38004473	(160291086)	+	(GT)n	Simple_repeat	1	34	(0)	2552389
9854	17.5	7.1	1.6	chr3	38663839	38665740	(159629819)	+	L1MA4	LINE/L1	3719	5757	(1808)	2553355
2344	12.6	6.0	0.0	chr3	38665741	38666098	(159629461)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2553357
267	16.2	0.0	5.6	chr3	39260896	39260967	(159034592)	+	L1ME4c	LINE/L1	110	177	(653)	2554246
313	27.0	1.1	0.0	chr3	39465845	39465933	(158829626)	C	MIR	SINE/MIR	(29)	233	144	2554585
2380	8.7	0.6	0.0	chr3	39990838	39991160	(158304399)	+	L1PA7	LINE/L1	5829	6153	(1)	2555270
1669	17.6	10.2	2.2	chr3	41517249	41517608	(156777951)	+	MLT1A1	LTR/ERVL-MaLR	1	392	(16)	2557571
17	0.0	0.0	0.0	chr3	42066427	42066445	(156229114)	+	(GA)n	Simple_repeat	1	19	(0)	2558488
72	7.1	0.0	0.0	chr3	42092682	42092772	(156202787)	+	(TGTTA)n	Simple_repeat	1	91	(0)	2558535
650	26.3	10.7	1.0	chr3	42506896	42507191	(155788368)	C	L1MC5a	LINE/L1	(5)	2772	2445	2559225
231	17.0	8.6	0.0	chr3	43106512	43106564	(155188995)	C	HAL1ME	LINE/L1	(185)	2280	2223	2560144
14	10.4	6.2	0.0	chr3	43994799	43994830	(154300729)	+	(GAGCGA)n	Simple_repeat	1	34	(0)	2561475
646	27.1	6.3	3.2	chr3	44648119	44648469	(153647090)	+	L1MC5a	LINE/L1	2400	2764	(13)	2562450
2243	11.1	1.0	2.2	chr3	45138561	45138876	(153156683)	+	AluSx1	SINE/Alu	1	312	(0)	2563303
2083	11.1	12.5	8.7	chr3	45138877	45139219	(153156340)	C	MSTB1	LTR/ERVL-MaLR	(55)	377	1	2563302
2385	10.6	0.0	0.0	chr3	45201437	45201747	(153093812)	+	AluSq2	SINE/Alu	1	311	(2)	2563423
261	33.5	10.4	9.6	chr3	45201748	45202039	(153093520)	+	L2c	LINE/L2	3075	3377	(10)	2563422
24	6.6	0.0	0.0	chr3	45596764	45596795	(152698764)	+	(GT)n	Simple_repeat	1	32	(0)	2564114
644	25.2	6.3	5.2	chr3	45938792	45938894	(152356665)	+	MER112	DNA/hAT-Charlie	155	260	(1)	2564684
2298	9.5	0.0	0.0	chr3	46724085	46724369	(151571190)	C	AluSx	SINE/Alu	(27)	285	1	2565840
16	14.1	7.3	2.3	chr3	46724524	46724564	(151570995)	+	GA-rich	Low_complexity	1	44	(0)	2565841
13	22.5	2.0	3.9	chr3	46812591	46812640	(151482919)	+	G-rich	Low_complexity	1	51	(0)	2565967
234	32.1	10.7	7.1	chr3	46955278	46955629	(151339930)	C	L2c	LINE/L2	(5)	3382	3017	2566167
557	15.3	4.1	2.5	chr3	48439652	48439772	(149855787)	C	L1MB8	LINE/L1	(10)	6168	6046	2569310
221	32.2	10.6	2.8	chr3	48439822	48440003	(149855556)	+	L2	LINE/L2	2883	3080	(339)	2569308
614	16.8	3.1	5.3	chr3	48846520	48846650	(149448909)	C	FLAM_A	SINE/Alu	(14)	128	1	2570097
422	28.9	9.5	0.5	chr3	48846742	48846943	(149448616)	+	L1MC5a	LINE/L1	2555	2776	(1)	2570098
241	41.2	9.4	0.0	chr3	49553412	49553593	(148741966)	+	MamRTE1	LINE/RTE-BovB	2499	2699	(1113)	2571616
4075	16.4	4.3	6.3	chr3	49745884	49746389	(148549170)	+	L1MB4	LINE/L1	5310	5827	(353)	2571880
319	38.9	5.3	0.0	chr3	50617851	50618012	(147677547)	C	MIR	SINE/MIR	(29)	233	63	2573290
361	32.1	1.9	0.9	chr3	52086825	52086931	(146208628)	+	L2a	LINE/L2	3319	3426	(0)	2575418
455	24.6	2.7	0.0	chr3	52243522	52243631	(146051928)	+	HAL1	LINE/L1	1654	1766	(741)	2575635
193	26.5	8.1	1.4	chr3	52243872	52243940	(146051619)	C	Tigger19a	DNA/TcMar-Tigger	(145)	178	105	2575636
1817	19.8	0.8	0.6	chr3	52952487	52952842	(145342717)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	9	2576712
909	22.7	5.3	3.5	chr3	52952841	52953100	(145342459)	+	MLT1A	LTR/ERVL-MaLR	110	374	(0)	2576711
280	30.7	13.5	1.8	chr3	55549107	55549275	(142746284)	+	MIRc	SINE/MIR	13	204	(64)	2580623
18	0.0	0.0	0.0	chr3	55549478	55549497	(142746062)	+	(T)n	Simple_repeat	1	20	(0)	2580624
423	27.1	4.8	5.0	chr3	55549506	55549719	(142745840)	C	MIRc	SINE/MIR	(32)	236	21	2580625
1073	5.0	0.0	0.0	chr3	56132526	56132645	(142162914)	+	AluYa8	SINE/Alu	170	289	(21)	2581554
11	13.6	2.8	5.4	chr3	56989231	56989266	(141306293)	+	(AAGGAC)n	Simple_repeat	1	37	(0)	2583111
281	25.3	15.9	0.0	chr3	57450665	57450759	(140844800)	C	L2b	LINE/L2	(0)	3375	3263	2583929
1344	27.2	8.7	2.1	chr3	57450799	57451218	(140844341)	+	LTR16A1	LTR/ERVL	7	456	(0)	2583930
31	0.0	0.0	0.0	chr3	57821913	57821941	(140473618)	+	(TCC)n	Simple_repeat	1	29	(0)	2584731
43	0.0	0.0	0.0	chr3	57939628	57939666	(140355893)	+	(T)n	Simple_repeat	1	39	(0)	2584971
1787	15.1	5.2	0.0	chr3	57939667	57939787	(140355772)	C	AluJb	SINE/Alu	(177)	135	1	2584970
603	15.7	0.0	0.0	chr3	57939833	57939915	(140355644)	C	AluJo	SINE/Alu	(228)	84	2	2584972
288	26.7	11.1	6.2	chr3	58167656	58167783	(140127776)	+	MIRb	SINE/MIR	13	154	(114)	2585469
745	18.7	0.7	1.4	chr3	58250746	58250886	(140044673)	+	MER3	DNA/hAT-Charlie	48	187	(22)	2585653
2228	11.3	1.3	0.3	chr3	58251038	58251339	(140044220)	+	AluSx1	SINE/Alu	1	305	(7)	2585654
264	28.6	11.7	7.5	chr3	58519399	58519695	(139775864)	C	L2c	LINE/L2	(267)	3120	2800	2586163
1005	30.9	8.4	4.1	chr3	61109806	61110672	(137184887)	+	L2a	LINE/L2	2517	3396	(30)	2590022
1950	16.2	0.0	0.0	chr3	61707791	61708086	(136587473)	C	AluJb	SINE/Alu	(14)	298	3	2591101
15	19.9	0.0	2.4	chr3	61708087	61708107	(136587452)	+	(TTTTTAT)n	Simple_repeat	7	27	(0)	2591102
2065	7.4	2.5	3.9	chr3	61708444	61708755	(136586804)	C	AluY	SINE/Alu	(0)	311	2	2591103
629	22.8	13.0	2.2	chr3	61894916	61895099	(136400460)	C	MER20	DNA/hAT-Charlie	(11)	208	2	2591419
17	8.0	0.0	0.0	chr3	62436857	62436883	(135858676)	+	(GAAAA)n	Simple_repeat	1	27	(0)	2592259
22	14.9	0.0	0.0	chr3	62436992	62437028	(135858531)	+	(AC)n	Simple_repeat	1	37	(0)	2592260
413	31.0	7.9	1.4	chr3	62574030	62574242	(135721317)	+	L2	LINE/L2	2596	2823	(596)	2592473
506	28.1	1.9	6.0	chr3	62574255	62574470	(135721089)	C	L2	LINE/L2	(544)	2875	2669	2592474
533	28.6	8.7	1.1	chr3	62574680	62574870	(135720689)	+	MIRb	SINE/MIR	60	266	(2)	2592475
1862	19.0	5.9	0.5	chr3	63565260	63565645	(134729914)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2594264
496	32.3	10.1	4.0	chr3	64149159	64149509	(134146050)	+	MLT1K	LTR/ERVL-MaLR	20	394	(201)	2595223
341	32.7	4.3	0.6	chr3	64495450	64495606	(133799953)	C	MIR3	SINE/MIR	(21)	187	25	2595846
15	13.2	0.0	5.4	chr3	66139020	66139056	(132156503)	+	(CCCCT)n	Simple_repeat	1	37	(0)	2598779
795	20.5	1.2	0.0	chr3	66152121	66152281	(132143278)	C	MER5A1	DNA/hAT-Charlie	(2)	164	2	2598808
526	29.6	9.2	4.3	chr3	66152333	66152683	(132142876)	C	MLT1L	LTR/ERVL-MaLR	(3)	607	226	2598809
520	26.3	6.0	6.0	chr3	70626639	70626784	(127668775)	C	MIR	SINE/MIR	(2)	260	112	2606063
2003	14.9	8.7	5.8	chr3	70626785	70627197	(127668362)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2606064
2253	14.3	0.9	2.0	chr3	71465717	71466058	(126829501)	+	MER1B	DNA/hAT-Charlie	2	339	(0)	2607266
362	35.6	3.9	1.6	chr3	71730196	71730443	(126565116)	+	MIRb	SINE/MIR	4	257	(11)	2607715
1264	26.1	8.3	3.6	chr3	71986941	71987378	(126308181)	+	MLT1C	LTR/ERVL-MaLR	8	467	(0)	2608224
532	32.7	1.9	6.8	chr3	71987443	71987491	(126308068)	C	MIR	SINE/MIR	(44)	218	172	2608225
813	22.8	0.0	1.9	chr3	71987492	71987653	(126307906)	C	FRAM	SINE/Alu	(17)	159	1	2608226
532	32.7	1.9	6.8	chr3	71987654	71987823	(126307736)	C	MIR	SINE/MIR	(91)	171	10	2608225
675	31.8	3.4	3.0	chr3	72153521	72153786	(126141773)	C	MIRb	SINE/MIR	(0)	268	2	2608583
742	29.1	10.1	8.0	chr3	72271685	72272134	(126023425)	+	HAL1	LINE/L1	149	626	(1881)	2608832
490	24.8	1.8	0.0	chr3	72272135	72272243	(126023316)	C	MER81	DNA/hAT-Blackjack	(2)	112	2	2608834
742	29.1	10.1	8.0	chr3	72272244	72272420	(126023139)	+	HAL1	LINE/L1	627	806	(1701)	2608832
621	29.1	8.7	4.4	chr3	72307503	72307754	(125987805)	+	MIRb	SINE/MIR	3	266	(2)	2608917
256	32.8	8.3	1.1	chr3	73011659	73011837	(125283722)	+	Tigger12c	DNA/TcMar-Tigger	26	218	(516)	2610431
211	25.4	3.1	3.1	chr3	73011849	73011913	(125283646)	C	MIRb	SINE/MIR	(79)	189	125	2610432
1413	18.1	8.7	3.7	chr3	73012046	73012297	(125283262)	C	MER2	DNA/TcMar-Tigger	(0)	345	74	2610433
932	24.9	8.3	1.9	chr3	73404645	73404959	(124890600)	+	MER113	DNA/hAT-Charlie	177	513	(8)	2611141
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
33	0.0	0.0	0.0	chr3	77155053	77155083	(121140476)	+	(AAAT)n	Simple_repeat	1	31	(0)	2616517
1118	25.4	7.4	5.1	chr3	77155161	77155650	(121139909)	+	MLT1D	LTR/ERVL-MaLR	4	505	(0)	2616518
309	30.1	12.0	2.8	chr3	78023862	78024073	(120271486)	C	LTR81AB	LTR/Gypsy	(132)	1021	788	2617572
691	35.8	5.8	3.2	chr3	78024191	78024473	(120271086)	+	MER115	DNA/hAT-Tip100	11	301	(392)	2617573
564	32.6	8.8	6.2	chr3	78024474	78024924	(120270635)	+	MLT1F2	LTR/ERVL-MaLR	8	471	(89)	2617574
948	15.0	1.7	3.4	chr3	78857540	78857718	(119437841)	+	MER5A	DNA/hAT-Charlie	1	176	(13)	2618708
238	33.0	1.1	4.2	chr3	78857724	78857818	(119437741)	C	MIRc	SINE/MIR	(147)	121	30	2618709
285	32.5	9.8	0.6	chr3	78941542	78941699	(119353860)	C	L2c	LINE/L2	(164)	3223	3050	2618826
1768	19.3	1.0	0.3	chr3	78942019	78942319	(119353240)	+	AluJb	SINE/Alu	1	303	(9)	2618827
13	17.6	2.4	4.7	chr3	79018824	79018865	(119276694)	+	(GCG)n	Simple_repeat	1	43	(0)	2618941
3966	4.6	0.4	0.8	chr3	79211778	79212279	(119083280)	C	MER9a3	LTR/ERVK	(0)	512	13	2619178
228	11.4	2.8	0.0	chr3	79212280	79212314	(119083245)	C	MER9a3	LTR/ERVK	(476)	36	1	2619178
1802	20.0	5.6	0.5	chr3	80411198	80411584	(117883975)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2620701
382	38.3	9.5	2.7	chr3	85360425	85360827	(112934732)	+	L2	LINE/L2	2340	2772	(647)	2626911
925	21.2	16.4	6.1	chr3	85361123	85361449	(112934110)	C	MER57E1	LTR/ERV1	(5)	367	1	2626912
3780	16.8	2.7	0.0	chr3	86220632	86221322	(112074237)	+	L1PA16	LINE/L1	5454	6163	(3)	2628000
13	27.9	3.1	3.0	chr3	90180831	90180895	(108114664)	+	GA-rich	Low_complexity	1	67	(0)	2632866
235	33.3	12.7	3.3	chr3	93992381	93992594	(104302965)	+	L2c	LINE/L2	3149	3385	(2)	2633660
1706	16.3	5.5	0.4	chr3	94059224	94059499	(104236060)	C	AluJb	SINE/Alu	(21)	291	1	2633767
401	26.9	12.7	1.4	chr3	94059565	94059711	(104235848)	+	L2	LINE/L2	2594	2759	(660)	2633768
1867	19.2	2.9	5.7	chr3	95075369	95075787	(103219772)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	2	2635035
2771	14.6	6.5	2.5	chr3	98038898	98039443	(100256116)	+	Tigger3	DNA/TcMar-Tigger	2530	3029	(0)	2638544
1499	24.6	1.5	4.7	chr3	99114354	99114762	(99180797)	C	L1M1	LINE/L1	(5273)	2292	1897	2639873
8916	16.6	1.5	0.9	chr3	99218568	99220254	(99075305)	+	L1MA3	LINE/L1	1803	3498	(4067)	2639983
27079	3.4	0.0	0.1	chr3	99288596	99294302	(99001257)	C	L1PA3	LINE/L1	(0)	6155	453	2640064
4315	23.0	8.4	1.7	chr3	99294315	99295971	(98999588)	+	L1MCa	LINE/L1	993	2854	(4274)	2640063
11646	16.3	3.9	3.8	chr3	99623736	99626015	(98669544)	+	L1M1	LINE/L1	17	2299	(5266)	2640470
337	33.1	9.8	0.0	chr3	100918838	100918985	(97376574)	+	MIR	SINE/MIR	2	165	(97)	2642332
267	33.6	2.9	4.3	chr3	101073898	101074037	(97221522)	C	MamGypsy2-I	LTR/Gypsy	(2992)	1174	1037	2642533
2250	16.6	11.5	2.0	chr3	101074077	101074223	(97221336)	+	MLT1D	LTR/ERVL-MaLR	1	149	(356)	2642534
1588	20.6	8.3	0.5	chr3	101074224	101074599	(97220960)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2642535
2250	16.6	11.5	2.0	chr3	101074600	101074907	(97220652)	+	MLT1D	LTR/ERVL-MaLR	150	505	(0)	2642534
2521	9.5	1.0	0.0	chr3	101557088	101557391	(96738168)	+	AluSc	SINE/Alu	2	308	(1)	2643173
1658	15.3	7.8	21.9	chr3	101557392	101557810	(96737749)	C	MER83	LTR/ERV1	(96)	352	1	2643172
858	9.1	14.1	4.6	chr3	101557811	101557846	(96737713)	C	L1MB2	LINE/L1	(197)	5974	5944	2643171
3054	18.8	4.9	3.2	chr3	101608146	101608359	(96687200)	C	L1M4b	LINE/L1	(4817)	2050	1834	2643275
1134	19.1	5.1	0.0	chr3	101608361	101608564	(96686995)	+	Tigger3b	DNA/TcMar-Tigger	1	215	(1016)	2643282
2065	10.5	4.6	7.3	chr3	101608565	101608878	(96686681)	+	AluSg4	SINE/Alu	1	305	(5)	2643283
259	25.7	7.3	4.8	chr3	102259339	102259485	(96036074)	C	HAL1b	LINE/L1	(0)	2465	2315	2644309
973	29.7	6.5	4.8	chr3	102259561	102259758	(96035801)	C	L1ME4b	LINE/L1	(217)	743	547	2644310
37	0.0	0.0	0.0	chr3	102259759	102259790	(96035769)	+	(TG)n	Simple_repeat	1	32	(0)	2644311
973	31.7	6.4	3.9	chr3	102259791	102260950	(96034609)	C	L1ME4b	LINE/L1	(414)	546	70	2644310
769	31.9	13.3	4.6	chr3	102617064	102617519	(95678040)	C	MamGypLTR1c	LTR/Gypsy	(8)	795	294	2644775
1769	18.8	4.8	0.5	chr3	103168888	103169290	(95126269)	+	L1MA9	LINE/L1	5221	5647	(665)	2645496
2562	23.5	0.9	2.9	chr3	103169292	103169914	(95125645)	+	Tigger7	DNA/TcMar-Tigger	3	624	(81)	2645497
753	7.9	0.0	0.0	chr3	106688678	106688778	(91606781)	+	HY3	scRNA	1	101	(0)	2649833
694	26.0	2.5	9.3	chr3	107239759	107240102	(91055457)	+	L1MC4	LINE/L1	7484	7803	(239)	2650542
667	11.8	3.2	3.2	chr3	107240198	107240320	(91055239)	+	MER20	DNA/hAT-Charlie	43	165	(54)	2650543
1842	19.8	8.1	0.3	chr3	107704420	107704784	(90590775)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2651237
272	34.6	10.2	8.8	chr3	107704785	107704973	(90590586)	C	L2b	LINE/L2	(132)	3243	3053	2651236
2614	14.3	0.9	4.0	chr3	108105774	108106217	(90189342)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	3	2651821
2187	25.9	4.6	2.1	chr3	108106229	108106791	(90188768)	+	MER20B	DNA/hAT-Charlie	7	586	(197)	2651822
274	32.1	8.4	5.1	chr3	108272294	108272605	(90022954)	C	MER110-int	LTR/ERV1	(2461)	2186	1864	2652067
903	22.5	4.8	3.6	chr3	108272689	108272937	(90022622)	C	ERV3-16A3_I-int	LTR/ERVL	(2703)	2523	2272	2652068
5838	20.1	7.3	4.8	chr3	108622251	108622836	(89672723)	C	L1M1	LINE/L1	(5207)	2358	1768	2652569
1930	16.4	0.3	0.7	chr3	109445051	109445348	(88850211)	C	AluJo	SINE/Alu	(15)	297	1	2653954
17721	12.4	2.0	4.1	chr3	109445349	109446776	(88848783)	+	L1M1	LINE/L1	1827	3255	(4310)	2653953
11259	15.6	3.8	0.8	chr3	109531821	109533863	(88761696)	C	L1M1	LINE/L1	(4978)	2587	112	2654064
22448	9.6	1.5	1.0	chr3	109795206	109800906	(88494653)	+	L1PA7	LINE/L1	700	6465	(4)	2654430
1998	14.7	8.7	0.3	chr3	112351706	112352093	(85943466)	C	MSTB1	LTR/ERVL-MaLR	(8)	424	1	2657689
2248	15.6	2.7	0.2	chr3	112377759	112378151	(85917408)	+	MSTB1	LTR/ERVL-MaLR	30	432	(0)	2657742
16	23.7	3.2	3.1	chr3	112378293	112378355	(85917204)	+	(CTTCT)n	Simple_repeat	1	65	(0)	2657743
2421	8.7	0.0	0.0	chr3	112735311	112735598	(85559961)	+	AluSc	SINE/Alu	9	296	(13)	2658226
1478	21.2	1.2	4.3	chr3	112838698	112839047	(85456512)	+	MLT2C1	LTR/ERVL	1	339	(58)	2658388
23	21.3	0.0	0.0	chr3	112839048	112839098	(85456461)	+	(CACA)n	Simple_repeat	1	51	(0)	2658389
251	18.0	0.0	2.0	chr3	112839109	112839159	(85456400)	+	Ricksha_c	DNA/MULE-MuDR	865	914	(1134)	2658390
3239	29.0	3.6	2.5	chr3	112839154	112840191	(85455368)	+	ERVL-E-int	LTR/ERVL	5	1056	(4611)	2658391
398	25.2	6.1	0.8	chr3	113088139	113088262	(85207297)	C	MIRb	SINE/MIR	(111)	157	27	2658709
227	32.8	0.0	0.0	chr3	113152414	113152480	(85143079)	C	MIRb	SINE/MIR	(85)	183	117	2658816
335	22.7	13.8	0.8	chr3	113152498	113152617	(85142942)	C	MIRc	SINE/MIR	(18)	250	113	2658817
341	35.4	2.3	0.0	chr3	113165084	113165213	(85130346)	C	L3	LINE/CR1	(8)	4091	3959	2658839
12013	16.3	4.8	8.1	chr3	113683767	113686457	(84609102)	C	L1M1	LINE/L1	(4316)	3249	136	2659561
17	4.9	0.0	0.0	chr3	113747007	113747027	(84548532)	+	(C)n	Simple_repeat	1	21	(0)	2659671
567	31.5	3.1	5.2	chr3	114153064	114153331	(84142228)	+	MIRb	SINE/MIR	7	268	(0)	2660369
197	38.0	1.8	4.4	chr3	115518840	115518952	(82776607)	+	MIR3	SINE/MIR	22	131	(77)	2662219
10222	20.6	5.0	3.2	chr3	116627530	116629528	(81666031)	C	L1MA3	LINE/L1	(4808)	2757	12	2663728
15	13.9	0.0	0.0	chr3	119239990	119240013	(79055546)	+	(A)n	Simple_repeat	1	24	(0)	2667268
286	25.4	12.8	3.9	chr3	119497722	119497848	(78797711)	C	LTR90B	LTR	(0)	796	657	2667685
1558	4.8	0.0	0.0	chr3	119498102	119498269	(78797290)	C	AluSq	SINE/Alu	(14)	299	132	2667686
328	19.4	12.3	4.1	chr3	119630690	119630786	(78664773)	C	LTR101_Mam	LTR/ERVL	(68)	761	656	2667910
516	26.5	1.2	9.1	chr3	120024910	120025076	(78270483)	+	L1MB8	LINE/L1	5887	6041	(137)	2668508
1501	13.0	6.9	0.5	chr3	120025077	120025292	(78270267)	+	AluSz6	SINE/Alu	1	231	(81)	2668509
516	26.5	1.2	9.1	chr3	120025293	120025311	(78270248)	+	L1MB8	LINE/L1	6042	6058	(120)	2668508
810	22.4	13.6	0.5	chr3	120025357	120025747	(78269812)	+	HAL1b	LINE/L1	985	1434	(987)	2668510
295	33.3	6.5	10.8	chr3	120554336	120554705	(77740854)	+	L2c	LINE/L2	3023	3375	(12)	2669325
639	26.2	10.5	0.0	chr3	122146336	122146556	(76149003)	C	L2a	LINE/L2	(0)	3426	3180	2671542
210	38.5	2.7	0.0	chr3	123433970	123434078	(74861481)	+	Tigger19a	DNA/TcMar-Tigger	137	248	(75)	2673691
393	25.4	3.9	6.2	chr3	123434150	123434279	(74861280)	+	MIRc	SINE/MIR	18	144	(124)	2673692
286	36.0	4.2	3.0	chr3	123434298	123434463	(74861096)	C	MIRc	SINE/MIR	(20)	248	81	2673693
1295	27.9	7.5	0.7	chr3	124316133	124316818	(73978741)	+	L2a	LINE/L2	2608	3355	(71)	2675120
22999	13.7	1.7	2.0	chr3	128131814	128134180	(70161379)	+	L1MA3	LINE/L1	9	2409	(5156)	2681250
392	22.4	9.4	0.8	chr3	128563060	128563185	(69732374)	+	L2	LINE/L2	2465	2602	(817)	2681936
825	23.7	4.8	3.0	chr3	128563211	128563475	(69732084)	C	L2	LINE/L2	(997)	2422	2153	2681919
733	24.9	5.8	2.0	chr3	128563483	128563679	(69731880)	C	MER63A	DNA/hAT-Blackjack	(5)	205	1	2681937
279	24.7	1.4	0.0	chr3	128563709	128563781	(69731778)	C	L2	LINE/L2	(1304)	2115	2042	2681919
1621	24.6	10.3	7.2	chr3	129452145	129453099	(68842460)	C	L2a	LINE/L2	(2)	3424	2439	2683784
668	30.9	7.2	2.4	chr3	129511966	129512217	(68783342)	+	MIRb	SINE/MIR	4	268	(0)	2683902
1008	15.9	1.2	0.6	chr3	129942077	129942239	(68353320)	+	AluJr	SINE/Alu	137	300	(12)	2684720
435	27.2	14.4	0.5	chr3	130874556	130874740	(67420819)	C	MLT1L	LTR/ERVL-MaLR	(2)	608	394	2686127
581	24.0	4.5	0.0	chr3	130874790	130874939	(67420620)	C	MER5A	DNA/hAT-Charlie	(26)	163	7	2686128
951	28.5	14.2	9.5	chr3	131447565	131447761	(66847798)	C	L1MEi	LINE/L1	(1189)	1023	782	2686922
1479	20.8	12.7	1.7	chr3	131447762	131448123	(66847436)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2686923
951	28.5	14.2	9.5	chr3	131448124	131448209	(66847350)	C	L1MEi	LINE/L1	(1431)	781	688	2686922
19818	13.7	4.6	1.2	chr3	132110606	132115486	(66180073)	C	L1MA3	LINE/L1	(2492)	5073	13	2687941
687	29.7	6.7	2.9	chr3	132731563	132731836	(65563723)	+	ERV24_Prim-int	LTR/ERV1	952	1236	(6339)	2688859
1598	24.4	10.5	3.6	chr3	133541149	133541374	(64754185)	+	MLT1F	LTR/ERVL-MaLR	1	240	(308)	2690118
632	16.8	0.9	0.9	chr3	133541375	133541488	(64754071)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2690119
1598	24.4	10.5	3.6	chr3	133541489	133541758	(64753801)	+	MLT1F	LTR/ERVL-MaLR	241	535	(13)	2690118
13	24.0	1.5	7.2	chr3	135503602	135503669	(62791890)	+	(CCTTTT)n	Simple_repeat	1	69	(0)	2692962
5218	25.6	4.8	2.7	chr3	135736169	135737074	(62558485)	C	L1MA6	LINE/L1	(4855)	2710	1793	2693263
320	33.6	0.8	0.0	chr3	138923789	138923916	(59371643)	C	LTR88a	LTR/Gypsy?	(434)	382	254	2698531
761	29.9	7.6	8.1	chr3	138923932	138924328	(59371231)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	201	2698532
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
2437	5.8	0.3	0.0	chr3	142225760	142226051	(56069508)	C	AluSg	SINE/Alu	(16)	294	2	2703769
3039	15.3	6.2	7.9	chr3	143104239	143104431	(55191128)	+	LTR28C	LTR/ERV1	376	588	(6)	2705196
526	25.4	13.6	4.5	chr3	143104432	143104669	(55190890)	+	LTR25-int	LTR/ERV1	2	276	(6912)	2705196
2054	17.1	8.0	0.7	chr3	143104670	143105075	(55190484)	+	LTR25-int	LTR/ERV1	408	845	(6246)	2705196
1128	25.2	8.3	4.3	chr3	143231940	143232468	(55063091)	+	MLT1E1	LTR/ERVL-MaLR	2	654	(0)	2705390
493	24.1	7.7	0.9	chr3	143580495	143580712	(54714847)	C	MER113B	DNA/hAT-Charlie	(63)	239	6	2705861
12	15.9	5.4	6.8	chr3	143580909	143580964	(54714595)	+	GA-rich	Low_complexity	1	59	(0)	2705862
2420	6.0	0.0	1.1	chr3	146623114	146623445	(51672114)	C	AluY	SINE/Alu	(0)	311	1	2709810
368	34.7	12.3	5.2	chr3	148333040	148333401	(49962158)	C	L2c	LINE/L2	(28)	3359	2969	2711990
19740	15.3	4.0	1.7	chr3	148518409	148522643	(49772916)	+	L1M1	LINE/L1	15	4356	(3209)	2712221
372	14.0	17.0	0.0	chr3	150046611	150046703	(48248856)	C	MER53	DNA/hAT	(81)	112	1	2714588
2018	20.6	7.0	0.8	chr3	150253919	150254389	(48041170)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	4	2714946
736	27.1	7.1	2.5	chr3	151431769	151432010	(46863549)	C	MIR	SINE/MIR	(6)	256	3	2716803
194	26.8	2.7	4.0	chr3	152910098	152910171	(45385388)	C	MIR	SINE/MIR	(110)	152	80	2718825
1994	16.0	5.7	2.0	chr3	152910221	152910610	(45384949)	C	MLT1A1	LTR/ERVL-MaLR	(3)	405	1	2718826
14712	16.9	2.3	2.2	chr3	153395603	153397751	(44897808)	C	L1MA3	LINE/L1	(5050)	2515	7	2719704
36	2.9	0.0	0.0	chr3	154430123	154430157	(43865402)	+	(GA)n	Simple_repeat	1	35	(0)	2721162
16	0.0	0.0	0.0	chr3	154939010	154939027	(43356532)	+	(A)n	Simple_repeat	1	18	(0)	2721802
6731	23.5	4.4	2.5	chr3	154939044	154941700	(43353859)	+	L1MA5A	LINE/L1	399	3111	(4455)	2721803
473	33.1	20.9	6.2	chr3	155648555	155649162	(42646397)	C	L2c	LINE/L2	(1)	3386	2688	2722762
418	30.8	9.1	0.8	chr3	155649163	155649424	(42646135)	C	MamTip3	DNA/hAT-Tip100	(0)	500	215	2722763
320	27.7	5.5	0.8	chr3	155869965	155870084	(42425475)	C	MamRep1879	DNA/hAT-Tip100?	(85)	131	6	2723193
14	14.1	0.0	3.0	chr3	155870486	155870520	(42425039)	+	G-rich	Low_complexity	1	33	(0)	2723194
2831	17.2	4.7	4.7	chr3	155877357	155877611	(42417948)	C	L1MB8	LINE/L1	(0)	6178	5944	2723206
2080	15.4	5.5	0.0	chr3	155877612	155877797	(42417762)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	160	2723207
1965	11.2	8.0	0.0	chr3	155877798	155878073	(42417486)	C	AluSx	SINE/Alu	(12)	300	1	2723208
2080	15.4	5.5	0.0	chr3	155878074	155878231	(42417328)	C	MLT1A0	LTR/ERVL-MaLR	(206)	159	2	2723207
358	18.4	7.6	1.8	chr3	155924854	155924964	(42370595)	+	L1MEd	LINE/L1	2270	2387	(3759)	2723299
858	9.3	0.0	0.0	chr3	155925401	155925507	(42370052)	C	AluSx3	SINE/Alu	(8)	303	197	2723302
21891	14.4	1.4	0.9	chr3	156270216	156273808	(42021751)	C	L1MA2	LINE/L1	(3938)	3627	16	2723798
263	33.2	8.1	7.7	chr3	156535434	156535903	(41759656)	+	L2	LINE/L2	2282	2753	(666)	2724171
2318	6.9	1.0	3.6	chr3	156815157	156815461	(41480098)	+	AluY	SINE/Alu	1	297	(14)	2724603
443	29.6	3.6	1.2	chr3	157089356	157089516	(41206043)	C	MIR3	SINE/MIR	(5)	203	39	2724955
205	27.9	2.9	0.0	chr3	157375135	157375202	(40920357)	+	MIRb	SINE/MIR	176	245	(23)	2725413
937	32.8	8.5	3.2	chr3	158852563	158853208	(39442351)	+	L2a	LINE/L2	2315	2997	(422)	2727404
371	31.4	8.3	6.1	chr3	158853209	158853503	(39442056)	C	LTR86A1	LTR/ERVL	(0)	513	212	2727407
312	26.7	1.3	0.0	chr3	159795929	159796003	(38499556)	+	MER5A	DNA/hAT-Charlie	66	141	(48)	2728753
480	29.0	10.9	6.5	chr3	159871905	159872243	(38423316)	C	HAL1	LINE/L1	(2149)	358	3	2728872
18926	8.1	1.3	1.8	chr3	160117397	160122084	(38173475)	+	L1PA8	LINE/L1	4145	7583	(8)	2729302
5578	13.5	7.5	1.0	chr3	161700880	161702172	(36593387)	+	L1MA1	LINE/L1	1414	2792	(4773)	2731746
17525	15.7	3.0	1.9	chr3	164278032	164282655	(34012904)	+	L1M1	LINE/L1	507	5178	(2387)	2734724
295	35.3	14.1	0.0	chr3	168072306	168072475	(30223084)	C	MIRb	SINE/MIR	(36)	232	35	2739555
1933	19.0	13.3	3.1	chr3	168878863	168879312	(29416247)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	2740645
2128	11.2	0.0	8.3	chr3	169593839	169594176	(28701383)	+	AluSx	SINE/Alu	3	312	(0)	2741527
744	22.9	6.9	0.0	chr3	169594383	169594557	(28701002)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	2741528
17	15.3	0.0	2.6	chr3	169668209	169668246	(28627313)	+	G-rich	Low_complexity	1	38	(0)	2741638
17	18.4	0.0	0.0	chr3	169668249	169668279	(28627280)	+	(AC)n	Simple_repeat	1	31	(0)	2741639
386	27.2	3.4	4.1	chr3	169968384	169968516	(28327043)	+	MIR	SINE/MIR	5	130	(100)	2742121
18	15.0	0.0	0.0	chr3	169968536	169968565	(28326994)	+	A-rich	Low_complexity	1	30	(0)	2742122
2346	12.2	0.3	0.0	chr3	170310486	170310788	(27984771)	+	AluSz	SINE/Alu	1	304	(8)	2742799
189	21.4	3.5	1.8	chr3	171088869	171088925	(27206634)	C	L2a	LINE/L2	(0)	3426	3369	2744017
36	0.0	0.0	0.0	chr3	171524288	171524320	(26771239)	+	(CTG)n	Simple_repeat	1	33	(0)	2744700
295	30.2	1.4	4.8	chr3	171937555	171937700	(26357859)	C	LTR88a	LTR/Gypsy?	(435)	381	241	2745317
28	0.0	6.4	4.0	chr3	172125452	172125498	(26170061)	+	(GGTAGTAGA)n	Simple_repeat	1	50	(0)	2745645
13	22.6	0.0	0.0	chr3	172140838	172140873	(26154686)	+	(TTATAT)n	Simple_repeat	1	36	(0)	2745665
373	14.3	8.3	0.0	chr3	172141002	172141078	(26154481)	+	MIR	SINE/MIR	101	184	(78)	2745666
2892	8.2	1.6	0.0	chr3	172657938	172658315	(25637244)	+	MER41A	LTR/ERV1	1	384	(170)	2746467
15	5.6	0.0	0.0	chr3	173584241	173584259	(24711300)	+	(A)n	Simple_repeat	1	19	(0)	2747754
35	0.0	0.0	0.0	chr3	173584400	173584432	(24711127)	+	(T)n	Simple_repeat	1	33	(0)	2747755
15	4.8	0.0	0.0	chr3	173584469	173584490	(24711069)	+	(AAGA)n	Simple_repeat	1	22	(0)	2747756
1410	20.1	11.5	1.2	chr3	174791269	174791595	(23503964)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2749483
8571	5.8	0.3	0.6	chr3	176869389	176870462	(21425097)	C	MER11C	LTR/ERVK	(0)	1071	1	2752227
12692	17.1	2.3	1.1	chr3	176870463	176871019	(21424540)	+	L1M1	LINE/L1	1833	2387	(5178)	2752225
2319	18.1	8.1	5.7	chr3	179439349	179439927	(18855632)	+	PRIMA4_LTR	LTR/ERV1	1	594	(0)	2756214
5379	10.5	2.8	2.2	chr3	182712779	182714054	(15581505)	+	L1PA16	LINE/L1	4881	6157	(9)	2761448
17	4.1	0.0	0.0	chr3	182714079	182714103	(15581456)	+	(GGAA)n	Simple_repeat	1	25	(0)	2761450
31	3.0	0.0	0.0	chr3	182714105	182714138	(15581421)	+	(GAGG)n	Simple_repeat	1	34	(0)	2761451
636	27.9	14.0	2.3	chr3	182971043	182971262	(15324297)	+	MIR	SINE/MIR	2	251	(11)	2761850
325	12.5	0.0	0.0	chr3	183128995	183129042	(15166517)	+	AluSc	SINE/Alu	252	299	(10)	2762149
1675	26.2	11.7	8.3	chr3	183129043	183129762	(15165797)	C	HAL1b	LINE/L1	(696)	1562	790	2762143
16	6.8	6.5	0.0	chr3	187139537	187139578	(11155981)	+	(GGCCCC)n	Simple_repeat	1	44	(0)	2769652
188	21.0	16.5	1.2	chr3	188202139	188202220	(10093339)	+	L2c	LINE/L2	3291	3387	(0)	2771476
25	15.5	4.0	0.0	chr3	188264770	188264819	(10030740)	+	(TC)n	Simple_repeat	1	52	(0)	2771594
15	19.6	0.0	0.0	chr3	190863075	190863109	(7432450)	+	G-rich	Low_complexity	1	35	(0)	2775748
1765	29.1	5.5	2.8	chr3	190971553	190972349	(7323210)	C	ERV3-16A3_I-int	LTR/ERVL	(900)	4814	3789	2775905
688	30.6	10.0	1.3	chr3	190972394	190972704	(7322855)	+	MLT1F1-int	LTR/ERVL-MaLR	1148	1488	(1)	2775906
345	31.8	1.5	2.5	chr3	192721117	192721243	(5574316)	C	L2c	LINE/L2	(19)	3368	3213	2778357
244	25.0	8.0	5.2	chr3	195910030	195910126	(2385433)	+	MIR3	SINE/MIR	82	181	(27)	2783822
350	12.3	1.5	1.5	chr3	196127191	196127256	(2168303)	+	L4_C_Mam	LINE/RTE-X	5073	5138	(0)	2784290
3356	19.4	2.5	1.3	chr3	196518651	196519277	(1776282)	+	HUERS-P3-int	LTR/ERV1	1	635	(8284)	2785204
28907	13.0	2.4	1.5	chr3	196519312	196520764	(1774795)	+	HUERS-P3-int	LTR/ERV1	749	2277	(6642)	2785204
246	20.3	14.7	0.0	chr3	196639071	196639134	(1656425)	+	MIRb	SINE/MIR	193	267	(1)	2785451
874	28.0	8.2	10.9	chr3	197270140	197271061	(1024498)	+	L1MC5a	LINE/L1	1469	2362	(415)	2786606
26	6.3	0.0	0.0	chr3	197298935	197298968	(996591)	+	(TTCA)n	Simple_repeat	1	34	(0)	2786667
273	24.3	15.0	1.5	chr3	197299251	197299363	(996196)	C	MIR3	SINE/MIR	(140)	128	4	2786668
415	25.0	3.5	2.6	chr3	197299526	197299640	(995919)	C	MIR3	SINE/MIR	(74)	134	19	2786669
16	30.4	4.0	0.0	chr4	1783466	1783539	(188431016)	+	G-rich	Low_complexity	1	77	(0)	2790595
1029	32.2	9.2	8.8	chr4	2604143	2604769	(187609786)	C	L1M5	LINE/L1	(3314)	2832	2193	2791915
28	9.8	0.0	0.0	chr4	2604770	2604814	(187609741)	+	(T)n	Simple_repeat	1	45	(0)	2791917
1585	17.1	0.4	4.2	chr4	2604820	2605106	(187609449)	C	AluJr	SINE/Alu	(34)	278	3	2791918
265	31.4	7.3	0.0	chr4	3411036	3411177	(186803378)	C	L1P1	LINE/L1	(1039)	5107	4956	2793151
334	31.5	11.5	1.8	chr4	3745865	3746117	(186468438)	+	L1MC4	LINE/L1	5852	6048	(1834)	2793548
25407	5.8	0.6	1.3	chr4	4013499	4019703	(186194852)	C	L1PA4	LINE/L1	(0)	6155	1	2793960
16	16.7	0.0	2.7	chr4	5774195	5774231	(184440324)	+	(CTCC)n	Simple_repeat	1	37	(0)	2797146
730	32.2	6.0	2.3	chr4	6478247	6478634	(183735921)	+	MLT1I	LTR/ERVL-MaLR	8	410	(1)	2798446
409	31.0	7.2	0.6	chr4	6478712	6478867	(183735688)	C	MLT1I	LTR/ERVL-MaLR	(4)	407	241	2798447
1369	18.4	13.4	4.8	chr4	7184778	7185087	(183029468)	+	MLT1A1	LTR/ERVL-MaLR	1	348	(60)	2799767
1767	16.4	0.0	4.9	chr4	7185088	7185392	(183029163)	C	AluJb	SINE/Alu	(22)	290	1	2799768
368	29.9	3.9	0.9	chr4	7250942	7251094	(182963461)	+	MIR3	SINE/MIR	5	157	(51)	2799871
23	12.2	0.0	5.9	chr4	7366200	7366261	(182848294)	+	(TCCT)n	Simple_repeat	1	58	(0)	2800057
301	31.2	13.7	1.5	chr4	7366488	7366884	(182847671)	+	L2b	LINE/L2	2923	3375	(0)	2800058
3464	19.0	1.7	1.7	chr4	11716361	11717449	(178497106)	C	L1MA6	LINE/L1	(632)	7087	6001	2806684
265	18.6	17.3	1.1	chr4	13483141	13483227	(176731328)	C	Charlie4z	DNA/hAT-Charlie	(20)	147	44	2809366
374	25.5	10.3	7.4	chr4	13483459	13483674	(176730881)	C	MIR	SINE/MIR	(20)	242	20	2809367
214	16.4	7.6	10.3	chr4	20250709	20250776	(169963779)	C	L2c	LINE/L2	(31)	3356	3291	2820691
426	25.2	7.1	4.9	chr4	26061249	26061438	(164153117)	C	MIRc	SINE/MIR	(52)	216	12	2830304
15	22.3	4.4	4.2	chr4	26061799	26061866	(164152689)	+	G-rich	Low_complexity	1	71	(0)	2830305
358	27.3	8.0	2.3	chr4	26061915	26062090	(164152465)	C	MIR3	SINE/MIR	(17)	191	5	2830306
22	28.6	1.9	3.8	chr4	38664913	38665016	(151549539)	+	(CCTCCC)n	Simple_repeat	1	106	(0)	2848199
16	25.1	2.8	4.1	chr4	38664975	38665045	(151549510)	+	(CCCG)n	Simple_repeat	1	73	(0)	2848200
585	24.2	22.5	11.7	chr4	40924343	40924848	(149289707)	+	MLT1G1	LTR/ERVL-MaLR	3	579	(0)	2853122
256	28.9	2.4	1.2	chr4	42865757	42865840	(147348715)	+	MER20B	DNA/hAT-Charlie	6	90	(693)	2856190
536	25.5	2.1	6.6	chr4	42866019	42866169	(147348386)	+	MER20B	DNA/hAT-Charlie	338	481	(302)	2856191
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
944	24.6	7.5	5.6	chr4	54126671	54126958	(136087597)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	72	2868781
523	19.1	5.3	0.0	chr4	54126939	54127027	(136087528)	C	AluJo	SINE/Alu	(218)	94	1	2868782
246	26.0	1.3	6.1	chr4	54126967	54127048	(136087507)	+	SVA_E	Retroposon/SVA	133	210	(1172)	2868783
7248	9.2	2.1	1.6	chr4	54127070	54127337	(136087218)	C	L1MA2	LINE/L1	(4)	6300	6028	2868784
237	26.9	1.9	0.0	chr4	55032422	55032473	(135182082)	C	MIR3	SINE/MIR	(136)	72	20	2870261
203	25.5	0.0	1.9	chr4	55032601	55032652	(135181903)	C	MIRb	SINE/MIR	(193)	75	25	2870262
288	32.0	2.8	0.0	chr4	55032655	55032757	(135181798)	+	MER5B	DNA/hAT-Charlie	3	108	(70)	2870263
3669	12.6	3.6	0.7	chr4	55330288	55330872	(134883683)	+	LTR26	LTR/ERV1	1	603	(0)	2870699
7055	23.3	6.2	3.0	chr4	55330873	55331197	(134883358)	+	L1ME3	LINE/L1	3909	4265	(3189)	2870697
17736	12.5	1.3	0.7	chr4	55671628	55674519	(134540036)	C	L1M1	LINE/L1	(4546)	3019	22	2871310
1129	26.2	4.2	4.7	chr4	55791611	55792015	(134422540)	C	LTR16A1	LTR/ERVL	(0)	456	54	2871475
250	27.8	6.1	2.6	chr4	56131224	56131316	(134083239)	+	MIRb	SINE/MIR	96	196	(66)	2872082
533	29.3	2.4	5.7	chr4	56542236	56542532	(133672023)	+	MER34B	LTR/ERV1	279	565	(0)	2872792
1453	15.2	0.0	1.7	chr4	56619079	56619311	(133595244)	C	MER44A	DNA/TcMar-Tigger	(110)	229	1	2872950
2118	15.9	1.9	0.3	chr4	56619312	56619670	(133594885)	C	L1MB1	LINE/L1	(79)	6089	5725	2872943
12	21.8	2.7	0.0	chr4	56908912	56908948	(133305607)	+	(CCGGCGC)n	Simple_repeat	1	38	(0)	2873606
1653	18.6	8.9	0.0	chr4	56959020	56959336	(133255219)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	2873709
20162	14.8	3.0	2.0	chr4	62303123	62305062	(127909493)	+	L1MA3	LINE/L1	1752	3734	(3831)	2880622
11751	20.2	3.4	1.7	chr4	66422866	66428153	(123786402)	+	L1M1	LINE/L1	12	6143	(1422)	2885604
4534	18.9	3.9	0.3	chr4	66757084	66758034	(123456521)	+	L1MA8	LINE/L1	5304	6289	(2)	2886003
843	27.8	10.4	13.1	chr4	67436549	67437114	(122777441)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	2886927
195	34.7	7.0	9.1	chr4	72296039	72296301	(117918254)	C	L2a	LINE/L2	(97)	3290	3034	2893323
774	25.3	6.8	2.9	chr4	72895290	72895343	(117319212)	C	MIR	SINE/MIR	(12)	250	199	2894053
2073	16.1	3.9	1.8	chr4	72895344	72895742	(117318813)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2894054
19583	15.4	4.0	5.8	chr4	73567056	73569369	(116645186)	C	L1MA3	LINE/L1	(5250)	2315	15	2895061
55	11.2	0.0	0.0	chr4	73982165	73982244	(116232311)	+	(A)n	Simple_repeat	1	80	(0)	2895572
381	30.8	8.3	3.4	chr4	74098035	74098222	(116116333)	C	MIR	SINE/MIR	(47)	221	16	2895703
5629	21.4	5.8	0.2	chr4	74133800	74135247	(116079308)	+	L1MA4	LINE/L1	1243	2775	(4790)	2895753
504	30.9	8.4	0.0	chr4	74886659	74886888	(115327667)	+	LTR88b	LTR/Gypsy?	4	254	(583)	2896821
12538	16.7	1.7	2.0	chr4	75116463	75118305	(115096250)	+	L1MA5	LINE/L1	174	2023	(5542)	2897107
2360	8.4	0.0	1.3	chr4	75118306	75118604	(115095951)	+	AluY	SINE/Alu	1	295	(16)	2897112
215	33.6	3.0	1.5	chr4	75395116	75395245	(114819310)	+	L2b	LINE/L2	3032	3163	(212)	2897400
1651	18.5	8.6	1.6	chr4	75395293	75395671	(114818884)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2897401
19	17.5	1.8	5.2	chr4	75395785	75395841	(114818714)	+	GA-rich	Low_complexity	1	58	(0)	2897402
9070	3.8	0.1	0.1	chr4	76154118	76155188	(114059367)	+	MER11C	LTR/ERVK	1	1071	(0)	2898799
268	29.9	14.1	1.4	chr4	76155280	76155489	(114059066)	C	L2	LINE/L2	(805)	2614	2374	2898800
184	33.9	3.7	5.8	chr4	76201092	76201282	(114013273)	+	L2a	LINE/L2	2973	3159	(228)	2898886
13866	15.4	1.9	4.7	chr4	76817642	76820361	(113394194)	C	L1MA3	LINE/L1	(2047)	4679	1967	2899890
1770	18.0	1.3	2.0	chr4	76820362	76820661	(113393894)	+	AluJr	SINE/Alu	3	300	(12)	2899893
13116	12.7	15.7	2.9	chr4	76820662	76821117	(113393438)	C	L1MA3	LINE/L1	(5599)	1966	1460	2899890
24310	9.1	1.5	0.2	chr4	77298461	77301620	(112912935)	C	L1PA6	LINE/L1	(2965)	3181	4	2900624
16031	8.2	1.2	0.2	chr4	77301627	77303726	(112910829)	C	L1P2	LINE/L1	(4064)	2120	1	2900626
2724	17.2	5.7	1.8	chr4	77385728	77386282	(112828273)	+	MER39	LTR/ERV1	33	610	(97)	2900681
24	11.2	0.0	0.0	chr4	78657819	78657857	(111556698)	+	(CCT)n	Simple_repeat	1	39	(0)	2902498
464	23.9	9.6	0.0	chr4	78657962	78658074	(111556481)	C	L2b	LINE/L2	(5)	3370	3246	2902499
569	27.9	3.2	2.7	chr4	80148351	80148538	(110066017)	+	LTR79	LTR/ERVL	1	189	(338)	2904458
1360	20.7	18.4	3.2	chr4	82013253	82013596	(108200959)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2906971
18880	14.4	3.6	3.6	chr4	82201049	82208046	(108006509)	+	L1MA3	LINE/L1	8	7724	(0)	2907237
389	29.8	10.0	4.2	chr4	82533518	82533780	(107680775)	+	Tigger11a	DNA/TcMar-Tigger	73	352	(383)	2907781
708	28.9	7.5	3.9	chr4	82533791	82534071	(107680484)	+	Tigger11a	DNA/TcMar-Tigger	443	734	(1)	2907782
409	28.8	3.1	7.3	chr4	82534170	82534469	(107680086)	+	L1ME4a	LINE/L1	4097	4391	(1755)	2907783
1422	26.9	7.7	2.1	chr4	82994700	82994916	(107219639)	C	L1PA8A	LINE/L1	(3460)	2686	2444	2908599
1717	17.2	0.0	3.1	chr4	82995009	82995299	(107219256)	+	AluJo	SINE/Alu	1	282	(30)	2908612
12128	14.8	1.6	1.8	chr4	83515761	83516719	(106697836)	C	ERVL-B4-int	LTR/ERVL	(333)	5381	4437	2909678
13	11.2	6.7	0.0	chr4	83536858	83536887	(106677668)	+	(GTGC)n	Simple_repeat	1	32	(0)	2909729
14296	21.0	3.5	1.8	chr4	84259244	84262148	(105952407)	+	L1PB4	LINE/L1	1377	4192	(2723)	2910883
21	20.2	2.0	0.0	chr4	84498039	84498089	(105716466)	+	GA-rich	Low_complexity	1	52	(0)	2911181
1964	19.6	3.2	2.0	chr4	84900881	84901210	(105313345)	C	MLT1A1	LTR/ERVL-MaLR	(7)	401	66	2911802
2051	16.7	10.3	0.3	chr4	84901211	84901595	(105312960)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2911803
10677	19.1	6.5	3.5	chr4	85221383	85224279	(104990276)	C	L1MA2	LINE/L1	(4170)	3395	13	2912238
3384	12.3	0.2	0.0	chr4	86132584	86133056	(104081499)	+	MER1A	DNA/hAT-Charlie	55	528	(1)	2913417
6516	17.0	4.4	0.4	chr4	86652122	86653497	(103561058)	C	L1M1	LINE/L1	(2947)	4618	1881	2914171
18	22.4	0.0	0.0	chr4	86653498	86653534	(103561021)	+	(T)n	Simple_repeat	1	37	(0)	2914172
409	27.1	7.6	0.0	chr4	87303027	87303159	(102911396)	+	L2a	LINE/L2	3282	3425	(1)	2915271
260	31.3	10.9	0.0	chr4	87303164	87303342	(102911213)	+	L1ME3G	LINE/L1	467	667	(257)	2915272
3016	16.3	1.5	0.0	chr4	87679947	87680480	(102534075)	+	MER34	LTR/ERV1	1	542	(0)	2915914
12	27.5	1.8	3.5	chr4	87680665	87680721	(102533834)	+	(CTCTGT)n	Simple_repeat	1	58	(0)	2915915
2295	11.4	0.3	0.7	chr4	87680735	87681042	(102533513)	C	AluSp	SINE/Alu	(6)	307	1	2915916
375	32.1	21.3	0.7	chr4	88219247	88219525	(101995030)	C	L2a	LINE/L2	(9)	3417	3066	2916769
3880	13.9	6.2	1.2	chr4	88219527	88219576	(101994979)	C	L1MB3	LINE/L1	(0)	6183	6139	2916770
2437	6.5	0.0	2.7	chr4	88219577	88219868	(101994687)	C	AluY	SINE/Alu	(7)	304	21	2916771
707	24.9	7.7	3.2	chr4	88334892	88335078	(101879477)	+	MIR	SINE/MIR	57	252	(10)	2916990
2455	13.7	5.6	0.0	chr4	88335154	88335556	(101878999)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	6	2916991
311	18.4	10.2	3.6	chr4	88595553	88595664	(101618891)	+	MIR3	SINE/MIR	49	152	(116)	2917434
214	22.2	4.8	0.5	chr4	88595663	88595721	(101618834)	C	MIRb	SINE/MIR	(53)	215	155	2917435
225	24.4	0.0	0.0	chr4	88595791	88595835	(101618720)	C	Chompy-6_Croc	DNA/PIF-Harbinger	(697)	283	239	2917436
2500	5.4	0.0	0.0	chr4	88595842	88596148	(101618407)	C	AluYe5	SINE/Alu	(0)	310	1	2917437
16	23.3	2.2	0.0	chr4	89307845	89307889	(100906666)	+	(GCC)n	Simple_repeat	1	46	(0)	2918454
19	14.8	0.0	2.5	chr4	89308014	89308053	(100906502)	+	(GGC)n	Simple_repeat	1	40	(0)	2918455
6255	15.5	5.3	2.6	chr4	89353475	89354093	(100860462)	C	Tigger3b	DNA/TcMar-Tigger	(582)	649	15	2918529
7144	17.9	3.7	4.5	chr4	91054906	91056251	(99158304)	C	L1M4c	LINE/L1	(3927)	2457	817	2920737
1475	20.5	6.9	3.8	chr4	91056252	91056646	(99157909)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2920739
1493	24.8	6.0	6.2	chr4	91064258	91064808	(99149747)	C	MER68B	LTR/ERVL	(2)	562	13	2920753
18239	14.8	2.4	1.4	chr4	93705509	93711464	(96503091)	C	L1M1	LINE/L1	(819)	6746	725	2923986
1500	26.8	3.3	4.2	chr4	94480310	94480831	(95733724)	C	LTR33A	LTR/ERVL	(3)	517	1	2925063
3138	17.0	4.8	0.5	chr4	94690830	94691433	(95523122)	+	Tigger2b_Pri	DNA/TcMar-Tigger	391	1021	(47)	2925387
23	0.0	0.0	0.0	chr4	94757884	94757908	(95456647)	+	(A)n	Simple_repeat	1	25	(0)	2925516
450	36.0	11.7	2.6	chr4	96438851	96439238	(93775317)	+	L2c	LINE/L2	2421	2848	(571)	2927684
18671	8.8	1.1	0.1	chr4	98010961	98013580	(92200975)	C	L1PA8	LINE/L1	(6)	6481	3833	2929569
19244	12.8	14.8	1.8	chr4	99732073	99733119	(90481436)	C	MER41-int	LTR/ERV1	(4782)	1164	1	2932029
256	9.2	25.5	8.4	chr4	99733130	99733181	(90481374)	C	MER41-int	LTR/ERV1	(7654)	102	32	2932029
5949	11.6	14.6	1.8	chr4	99733182	99734255	(90480300)	C	MER11B	LTR/ERVK	(0)	1236	1	2932033
476	29.6	10.5	1.4	chr4	100057511	100057834	(90156721)	+	Charlie8	DNA/hAT-Charlie	2	312	(19)	2932527
21	9.4	0.0	0.0	chr4	101346184	101346217	(88868338)	+	(AGGGGG)n	Simple_repeat	1	34	(0)	2934245
13	27.8	3.1	3.0	chr4	101346414	101346477	(88868078)	+	(CAC)n	Simple_repeat	1	66	(0)	2934246
15	15.9	2.9	0.0	chr4	101346648	101346682	(88867873)	+	(GGCGA)n	Simple_repeat	1	36	(0)	2934247
282	28.0	5.3	0.0	chr4	102185590	102185696	(88028859)	C	ERVL-E-int	LTR/ERVL	(5152)	515	403	2935341
3044	12.0	2.6	0.0	chr4	102730744	102731185	(87483370)	+	LTR10G	LTR/ERV1	2	455	(68)	2936062
1310	18.9	15.4	4.2	chr4	103010130	103010489	(87204066)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2936476
1881	18.2	3.0	2.7	chr4	103910102	103910507	(86304048)	+	MLT1A1	LTR/ERVL-MaLR	2	408	(0)	2937596
231	32.2	5.8	0.0	chr4	103910512	103910657	(86303898)	C	L1MD	LINE/L1	(1573)	4573	4419	2937597
12	16.1	0.0	3.3	chr4	105979382	105979411	(84235144)	+	A-rich	Low_complexity	1	30	(0)	2940252
2538	6.8	0.0	0.0	chr4	107720854	107721149	(82493406)	C	AluSg	SINE/Alu	(14)	296	1	2942431
3181	12.8	5.1	2.5	chr4	108002163	108002673	(82211882)	+	MER1A	DNA/hAT-Charlie	1	525	(4)	2942802
1738	16.3	13.0	3.5	chr4	108002674	108002825	(82211730)	+	MLT1A1	LTR/ERVL-MaLR	226	408	(0)	2942801
665	29.6	1.5	1.0	chr4	108002895	108003095	(82211460)	C	MIR	SINE/MIR	(0)	262	61	2942803
1800	14.3	13.4	1.4	chr4	108003120	108003466	(82211089)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	2	2942804
11	25.0	0.0	4.3	chr4	108173224	108173269	(82041286)	+	(CGCCCCC)n	Simple_repeat	1	46	(0)	2943038
234	20.0	5.2	0.0	chr4	109832248	109832302	(80382253)	+	MamRep605	LTR?	551	608	(241)	2945595
406	7.1	0.0	0.0	chr4	110411453	110411508	(79803047)	+	MER4A	LTR/ERV1	609	664	(0)	2946567
1857	17.3	9.0	2.7	chr4	112242398	112242801	(77971754)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2948915
842	20.8	2.2	1.7	chr4	112860950	112861179	(77353376)	+	UCON76	Unknown	1	231	(10)	2950013
12	21.7	0.0	0.0	chr4	114598686	114598717	(75615838)	+	G-rich	Low_complexity	1	32	(0)	2952251
3444	27.1	3.8	2.9	chr4	115657669	115659095	(74555460)	C	L1M1	LINE/L1	(5417)	2148	27	2953539
1749	20.5	1.2	0.3	chr4	116358509	116358840	(73855715)	+	HERVL18-int	LTR/ERVL	634	968	(5079)	2954338
1181	22.2	0.0	1.4	chr4	116358832	116359050	(73855505)	+	HERVL18-int	LTR/ERVL	1399	1614	(4433)	2954338
1290	16.4	17.7	5.5	chr4	116359083	116359408	(73855147)	+	HERVL18-int	LTR/ERVL	2119	2484	(3563)	2954338
917	20.9	0.0	1.1	chr4	116870663	116870846	(73343709)	C	MER83B	LTR/ERV1	(13)	365	184	2954981
445	31.1	5.8	4.1	chr4	118957723	118957926	(71256629)	C	MIRc	SINE/MIR	(39)	229	25	2957777
16049	11.8	3.8	1.8	chr4	120177863	120180114	(70034441)	+	L1MA3	LINE/L1	1048	3359	(4206)	2959469
410	26.2	16.7	3.0	chr4	120696528	120696692	(69517863)	+	MIRb	SINE/MIR	63	254	(14)	2960106
205	31.9	6.5	0.0	chr4	120696731	120696846	(69517709)	+	L3	LINE/CR1	2465	2588	(1511)	2960108
257	29.7	7.5	1.6	chr4	120696969	120697156	(69517399)	+	L1M6	LINE/L1	2283	2482	(4014)	2960109
621	11.9	22.6	9.0	chr4	120719086	120719251	(69495304)	C	MER20	DNA/hAT-Charlie	(0)	219	25	2960142
1115	21.1	8.0	0.4	chr4	120719270	120719512	(69495043)	C	MER5C1	DNA/hAT-Charlie	(0)	263	1	2960143
190	27.1	9.1	4.1	chr4	120724190	120724262	(69490293)	+	OldhAT1	DNA/hAT-Ac	2169	2245	(603)	2960152
563	31.3	9.4	5.1	chr4	121077653	121077965	(69136590)	C	L2b	LINE/L2	(1)	3374	3047	2960596
3264	19.2	7.6	1.0	chr4	121381374	121382526	(68832029)	C	L1MD2	LINE/L1	(54)	6188	5010	2961004
14194	11.9	2.1	0.1	chr4	122251985	122254093	(67960462)	+	L1M1	LINE/L1	782	2933	(4632)	2962272
588	22.1	0.7	4.9	chr4	122798015	122798157	(67416398)	C	LTR81A	LTR/Gypsy	(1136)	214	78	2963034
17335	10.0	3.9	2.5	chr4	122820768	122821482	(67393073)	C	Charlie3	DNA/hAT-Charlie	(1748)	958	188	2963078
2198	10.7	0.0	1.7	chr4	128285129	128285427	(61929128)	C	AluSx1	SINE/Alu	(17)	295	2	2970491
13	21.9	3.5	5.0	chr4	128393637	128393694	(61820861)	+	GA-rich	Low_complexity	1	60	(0)	2970684
12101	20.4	2.6	0.5	chr4	129997755	130000000	(60214555)	+	L1M1	LINE/L1	22	2314	(5251)	2972865
675	22.0	7.4	6.0	chr4	132003217	132003482	(58211073)	C	MLT1A	LTR/ERVL-MaLR	(24)	366	139	2975353
1811	17.4	7.9	2.1	chr4	132003483	132003864	(58210691)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	1	2975354
2414	13.8	4.6	1.0	chr4	138936706	138937121	(51277434)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2983585
218	22.4	2.9	6.9	chr4	139279233	139279304	(50935251)	C	MIR	SINE/MIR	(11)	251	183	2984348
13	15.8	6.8	2.1	chr4	139734990	139735033	(50479522)	+	(GCCCGC)n	Simple_repeat	1	47	(0)	2985181
17	12.5	0.0	0.0	chr4	139951722	139951747	(50262808)	+	(T)n	Simple_repeat	1	26	(0)	2985496
440	12.2	5.1	0.0	chr4	143025345	143025418	(47189137)	C	MADE1	DNA/TcMar-Mariner	(2)	78	1	2989693
5112	21.3	3.9	5.4	chr4	143025419	143025695	(47188860)	+	L1M1	LINE/L1	1790	2096	(5469)	2989692
4615	23.7	7.1	2.9	chr4	143025708	143027663	(47186892)	+	L1P4a	LINE/L1	2	1984	(4650)	2989694
16731	15.6	2.3	1.3	chr4	144232980	144235738	(45978817)	+	L1M1	LINE/L1	10	2797	(4768)	2991355
485	21.7	10.6	6.2	chr4	145840257	145840418	(44374137)	+	MER91B	DNA/hAT-Tip100	1	170	(20)	2993473
242	32.0	11.1	3.0	chr4	146097498	146097629	(44116926)	+	MIR	SINE/MIR	118	261	(1)	2993813
18	3.5	0.0	6.1	chr4	146175529	146175561	(44038994)	+	(TTTTG)n	Simple_repeat	1	33	(0)	2993935
12	10.7	2.9	5.7	chr4	146361322	146361355	(43853200)	+	(AATCAA)n	Simple_repeat	1	35	(0)	2994213
7957	16.0	6.4	1.3	chr4	146361429	146364467	(43850088)	+	L1M1	LINE/L1	1811	5037	(2528)	2994214
1512	11.3	2.0	0.0	chr4	147577712	147577905	(42636650)	C	AluSc	SINE/Alu	(5)	304	107	2995812
261	29.0	9.9	8.5	chr4	147577998	147578389	(42636166)	+	MLT1N2	LTR/ERVL-MaLR	4	479	(83)	2995813
434	25.2	5.9	2.7	chr4	147708228	147708374	(42506181)	C	MER20B	DNA/hAT-Charlie	(618)	165	14	2996081
13	19.5	2.9	0.0	chr4	147738000	147738034	(42476521)	+	(TTG)n	Simple_repeat	1	36	(0)	2996137
425	30.5	3.2	10.5	chr4	147738121	147738269	(42476286)	+	MIR	SINE/MIR	3	147	(115)	2996138
2315	6.7	0.0	0.7	chr4	147738270	147738552	(42476003)	+	AluY	SINE/Alu	1	281	(30)	2996139
214	34.6	0.0	1.3	chr4	147768098	147768176	(42446379)	C	L2c	LINE/L2	(35)	3352	3275	2996212
3281	22.2	2.3	9.9	chr4	147983485	147984198	(42230357)	C	L1PA17	LINE/L1	(4706)	1887	1239	2996541
778	28.7	1.4	3.7	chr4	147984252	147984548	(42230007)	C	L1PA17	LINE/L1	(6003)	870	581	2996541
978	26.0	0.9	8.1	chr4	148289642	148289988	(41924567)	+	MLT1F2	LTR/ERVL-MaLR	65	386	(174)	2996940
1439	21.2	8.5	4.0	chr4	148290012	148290359	(41924196)	C	MLT1B	LTR/ERVL-MaLR	(6)	384	20	2996941
2160	15.2	8.0	0.2	chr4	149995569	149995963	(40218592)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2999114
2552	18.6	1.8	7.2	chr4	151297720	151298181	(38916374)	+	MLT1D	LTR/ERVL-MaLR	3	440	(65)	3001224
2491	7.8	3.0	0.0	chr4	151298182	151298475	(38916080)	C	AluSc	SINE/Alu	(6)	303	1	3001225
278	33.6	2.7	7.1	chr4	151314407	151314560	(38899995)	C	MIRc	SINE/MIR	(72)	196	50	3001262
700	29.8	3.9	1.6	chr4	151314580	151314627	(38899928)	+	MIR	SINE/MIR	5	55	(207)	3001263
770	27.9	12.8	9.9	chr4	151314628	151315121	(38899434)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	1	3001264
13	26.6	3.7	0.0	chr4	151409571	151409624	(38804931)	+	G-rich	Low_complexity	1	56	(0)	3001454
209	20.6	0.0	0.0	chr4	152209938	152209971	(38004584)	C	MIR3	SINE/MIR	(134)	74	41	3002632
24	19.5	4.8	0.0	chr4	152210424	152210485	(38004070)	+	GA-rich	Low_complexity	1	65	(0)	3002633
590	27.4	4.7	0.9	chr4	153085505	153085729	(37128826)	+	MIR	SINE/MIR	4	237	(25)	3004006
16	13.6	7.3	0.0	chr4	155925694	155925734	(34288821)	+	(AACA)n	Simple_repeat	1	44	(0)	3008106
38	5.0	0.0	0.0	chr4	157220633	157220674	(32993881)	+	(TG)n	Simple_repeat	1	42	(0)	3009823
12	18.1	0.0	3.0	chr4	159346872	159346904	(30867651)	+	(CAGCCC)n	Simple_repeat	1	33	(0)	3012746
4453	15.2	4.2	1.6	chr4	159667126	159667961	(30546594)	C	L1MA4	LINE/L1	(0)	6300	5442	3013222
3904	23.8	6.2	2.7	chr4	159667964	159669549	(30545006)	C	L1M1	LINE/L1	(5241)	2324	20	3013223
1258	28.2	2.2	1.6	chr4	164989240	164989607	(25224948)	+	MLT1A	LTR/ERVL-MaLR	5	374	(0)	3020281
5774	14.6	8.4	2.0	chr4	165474293	165476023	(24738532)	C	MER50-int	LTR/ERV1	(5355)	1850	8	3021156
4286	13.7	1.1	1.2	chr4	165476025	165476747	(24737808)	C	MER50	LTR/ERV1	(12)	722	1	3021156
189	26.1	4.3	6.4	chr4	165875234	165875327	(24339228)	+	Penelope1_Vert	LINE/Penelope	93	184	(903)	3021707
1258	4.8	0.0	0.0	chr4	168746265	168746410	(21468145)	+	AluYc	SINE/Alu	154	299	(0)	3025262
271	31.1	10.2	0.0	chr4	168746474	168746579	(21467976)	+	L2b	LINE/L2	3256	3373	(2)	3025263
284	34.9	5.2	0.0	chr4	169311575	169311703	(20902852)	C	L2b	LINE/L2	(11)	3364	3229	3026148
8964	11.4	4.5	3.3	chr4	169446437	169447600	(20766955)	+	L1M1	LINE/L1	2030	3178	(4387)	3026353
335	32.7	6.7	5.9	chr4	169621910	169622130	(20592425)	C	MamRTE1	LINE/RTE-BovB	(1)	3811	3589	3026583
379	30.8	6.6	3.6	chr4	169622320	169622511	(20592044)	C	MamRTE1	LINE/RTE-BovB	(481)	3331	3134	3026583
781	27.7	7.3	1.6	chr4	169622554	169622799	(20591756)	C	MIR	SINE/MIR	(1)	261	1	3026584
5357	24.1	3.8	4.3	chr4	171328361	171330327	(18884228)	+	L1M1	LINE/L1	2	2667	(4898)	3028836
779	22.2	3.2	1.9	chr4	172129495	172129710	(18084845)	C	MER65-int	LTR/ERV1	(4275)	596	378	3029861
1669	17.7	1.8	3.6	chr4	172129925	172130258	(18084297)	C	MER65A	LTR/ERV1	(3)	442	115	3029861
1952	14.8	0.0	0.3	chr4	180456464	180456747	(9757808)	+	AluJb	SINE/Alu	1	283	(29)	3040771
32	0.0	5.4	0.0	chr4	180456749	180456785	(9757770)	+	(AAAACA)n	Simple_repeat	1	39	(0)	3040772
593	29.1	8.0	0.7	chr4	181946085	181946385	(8268170)	C	L1ME3G	LINE/L1	(419)	505	181	3042751
327	32.0	9.1	5.0	chr4	181946405	181946624	(8267931)	+	L2c	LINE/L2	3103	3332	(55)	3042752
1007	25.8	15.1	2.8	chr4	183729728	183730238	(6484317)	C	L2a	LINE/L2	(214)	3212	2643	3045503
444	26.7	1.0	0.0	chr4	183730238	183730338	(6484217)	C	MIR1_Amn	SINE/MIR	(110)	120	19	3045505
497	28.3	13.7	8.9	chr4	184537191	184537727	(5676828)	+	L1M6	LINE/L1	43	613	(5883)	3046748
1723	15.4	7.5	0.3	chr4	184537728	184538047	(5676508)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3046749
497	28.3	13.7	8.9	chr4	184538048	184538241	(5676314)	+	L1M6	LINE/L1	614	815	(5681)	3046748
241	29.5	8.3	0.8	chr4	184538261	184538383	(5676172)	+	L1M6	LINE/L1	896	1028	(5468)	3046748
1901	13.9	0.7	2.0	chr4	185202268	185202570	(5011985)	+	AluJb	SINE/Alu	7	305	(7)	3047886
16	20.2	1.3	9.2	chr4	185210176	185210252	(5004303)	+	(CCG)n	Simple_repeat	1	70	(0)	3047899
27	3.4	0.0	0.0	chr4	185210436	185210465	(5004090)	+	(CGGGCTC)n	Simple_repeat	1	30	(0)	3047900
1672	24.7	13.4	0.6	chr4	186558785	186559356	(3655199)	+	L1MEa	LINE/L1	732	1424	(4818)	3049842
2160	23.4	7.6	4.3	chr4	186559357	186559892	(3654663)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	73	3049844
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
7973	10.4	3.5	1.2	chr5	11943	13334	(181524925)	C	TAR1	Satellite/telo	(43)	2068	644	3054967
1595	8.9	2.2	0.9	chr5	572907	573133	(180965126)	+	MER30	DNA/hAT-Charlie	1	230	(0)	3055527
4570	20.6	2.1	2.9	chr5	1942004	1943153	(179595106)	C	L1MB3	LINE/L1	(3)	6180	5068	3056806
3081	20.9	4.5	2.0	chr5	7260774	7261114	(174277145)	+	L1M4b	LINE/L1	2320	2668	(4199)	3062904
1256	25.1	7.1	5.6	chr5	7261115	7261651	(174276608)	C	LTR55	LTR/ERVL?	(2)	546	1	3062908
11	24.8	0.0	0.0	chr5	10831948	10831981	(170706278)	+	G-rich	Low_complexity	1	34	(0)	3067518
554	32.6	7.0	2.0	chr5	10832175	10832418	(170705841)	+	MIRb	SINE/MIR	4	260	(8)	3067519
948	31.3	6.9	7.2	chr5	14017838	14018392	(167519867)	+	MLT1N2	LTR/ERVL-MaLR	2	554	(8)	3071621
5901	21.1	6.9	4.4	chr5	14155184	14156718	(167381541)	C	L1MC4	LINE/L1	(76)	7966	6390	3071872
329	28.0	4.8	0.0	chr5	14458275	14458374	(167079885)	C	L2a	LINE/L2	(16)	3410	3306	3072198
2509	5.9	0.0	5.6	chr5	15823997	15824319	(165713940)	+	AluSz	SINE/Alu	2	306	(6)	3074130
1039	18.5	1.0	1.4	chr5	16964777	16964984	(164573275)	+	MER45B	DNA/hAT-Tip100	834	1040	(0)	3075895
459	35.1	2.5	0.5	chr5	19885121	19885312	(161652947)	+	MIR	SINE/MIR	6	201	(61)	3079918
285	26.7	0.0	15.1	chr5	20972486	20972604	(160565655)	+	LTR41	LTR/ERVL	88	188	(580)	3081351
218	27.4	2.6	18.1	chr5	22056724	22056861	(159481398)	C	MIRb	SINE/MIR	(41)	227	112	3082893
1083	23.9	0.0	1.9	chr5	22057075	22057287	(159480972)	C	MER58A	DNA/hAT-Charlie	(14)	210	2	3082894
5821	26.8	6.0	5.3	chr5	28027253	28028739	(153509520)	+	L1M1	LINE/L1	22	2610	(4955)	3090638
875	20.1	0.6	1.9	chr5	32428425	32428583	(149109676)	+	AluJo	SINE/Alu	134	290	(22)	3096819
235	34.8	5.9	0.9	chr5	32428589	32428644	(149109615)	+	Charlie10a	DNA/hAT-Charlie	159	277	(3)	3096820
236	23.2	0.0	1.8	chr5	32428645	32428701	(149109558)	C	MER5C1	DNA/hAT-Charlie	(204)	59	4	3096821
4687	14.2	6.2	1.2	chr5	33476703	33477479	(148060780)	+	LTR8B	LTR/ERV1	2	820	(0)	3098404
10701	17.1	6.0	3.9	chr5	36322199	36324971	(145213288)	C	L1MA2	LINE/L1	(4376)	3189	15	3102593
738	13.1	0.0	11.1	chr5	37248539	37248691	(144289568)	+	FRAM	SINE/Alu	41	176	(0)	3104087
604	27.0	7.8	0.5	chr5	37248712	37248912	(144289347)	+	L1MC5a	LINE/L1	1874	2090	(687)	3104088
2366	13.0	4.7	2.0	chr5	37281863	37282216	(144256043)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3104154
8100	8.7	1.9	1.4	chr5	37282217	37282523	(144255736)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1284	3104154
288	27.2	8.1	0.0	chr5	37366307	37366431	(144171828)	C	L1MC5	LINE/L1	(16)	9288	9153	3104365
2258	8.8	0.0	3.6	chr5	37366440	37366662	(144171597)	C	AluSc5	SINE/Alu	(12)	297	85	3104366
2467	24.1	5.2	3.2	chr5	38043639	38044333	(143493926)	+	L1ME3	LINE/L1	5423	6133	(29)	3105469
1208	30.2	2.7	0.0	chr5	38917955	38918318	(142619941)	C	MER115	DNA/hAT-Tip100	(71)	622	249	3106848
1559	9.1	0.0	1.9	chr5	39452244	39452451	(142085808)	C	AluSc8	SINE/Alu	(10)	301	98	3107563
1493	25.6	4.0	1.4	chr5	39452464	39453019	(142085240)	C	MamRep1151	LTR?	(137)	572	2	3107562
447	28.1	14.0	0.5	chr5	41764181	41764384	(139773875)	+	MIRc	SINE/MIR	17	252	(16)	3110804
2298	10.2	0.0	0.0	chr5	43064333	43064635	(138473624)	+	AluSx	SINE/Alu	2	304	(8)	3112477
1891	15.9	20.4	3.2	chr5	43064636	43064675	(138473584)	+	MER61D	LTR/ERV1	465	501	(0)	3112476
1661	14.4	0.0	0.0	chr5	43065880	43066122	(138472137)	+	AluSx3	SINE/Alu	65	307	(4)	3112479
2815	13.1	5.2	0.4	chr5	50648595	50649056	(130889203)	+	MER31A	LTR/ERV1	1	485	(0)	3116770
355	23.3	7.2	1.0	chr5	50649286	50649389	(130888870)	+	MER31-int	LTR/ERV1	172	282	(4654)	3116770
630	22.6	2.7	6.0	chr5	50649368	50649598	(130888661)	+	MER31-int	LTR/ERV1	201	404	(4532)	3116770
368	23.8	0.0	0.0	chr5	53426175	53426258	(128112001)	C	MamRep564	Unknown	(74)	283	200	3120239
366	28.2	11.2	0.7	chr5	53426314	53426456	(128111803)	C	MamRep1879	DNA/hAT-Tip100?	(41)	175	16	3120240
2563	7.2	0.0	0.3	chr5	54401197	54401500	(127136759)	+	AluY	SINE/Alu	1	303	(8)	3121657
1119	18.6	4.3	1.6	chr5	54401628	54401924	(127136335)	+	MLT1F	LTR/ERVL-MaLR	188	546	(23)	3121658
381	25.5	4.6	6.8	chr5	57042053	57042229	(124496030)	C	MER103C	DNA/hAT-Charlie	(120)	177	5	3125967
537	22.2	13.1	6.7	chr5	57042287	57042372	(124495887)	C	MER45A	DNA/hAT-Tip100	(0)	178	94	3125968
871	15.9	0.0	3.6	chr5	57042373	57042510	(124495749)	+	FLAM_C	SINE/Alu	1	133	(10)	3125969
537	22.2	13.1	6.7	chr5	57042511	57042587	(124495672)	C	MER45A	DNA/hAT-Tip100	(85)	93	3	3125968
282	32.7	11.6	1.6	chr5	57042599	57042915	(124495344)	+	L2	LINE/L2	2488	2840	(579)	3125962
532	30.4	1.6	8.5	chr5	59062500	59062769	(122475490)	+	L1MC4	LINE/L1	7791	8041	(1)	3128983
15168	12.2	2.5	2.1	chr5	59287060	59289436	(122248823)	+	L1MA3	LINE/L1	1099	3484	(4081)	3129324
1647	24.9	8.6	1.9	chr5	62568598	62569109	(118969150)	C	L1M1	LINE/L1	(5283)	2282	1734	3134023
1080	24.1	0.3	8.3	chr5	62569169	62569480	(118968779)	C	L1M1	LINE/L1	(6737)	752	466	3134023
404	18.9	13.2	1.5	chr5	65036021	65036154	(116502105)	C	L1ME4a	LINE/L1	(0)	6124	5973	3137272
303	30.8	10.6	3.0	chr5	65036193	65036393	(116501866)	C	L1ME4a	LINE/L1	(189)	5935	5718	3137272
578	28.6	5.4	1.7	chr5	68212480	68212657	(113325602)	+	MER102b	DNA/hAT-Charlie	70	254	(87)	3141931
747	24.9	0.6	0.6	chr5	68212712	68212889	(113325370)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	3141932
895	19.5	0.6	0.0	chr5	68212898	68213061	(113325198)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	3141933
948	23.0	10.4	6.7	chr5	68265358	68265716	(113272543)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3141994
498	20.2	3.1	2.0	chr5	68265724	68265893	(113272366)	+	L1ME2z	LINE/L1	6307	6417	(27)	3141995
16	14.5	0.0	0.0	chr5	68288513	68288543	(113249716)	+	(CGAGC)n	Simple_repeat	1	31	(0)	3142020
550	35.6	3.4	9.6	chr5	68545972	68546285	(112991974)	+	L2b	LINE/L2	3073	3366	(9)	3142415
764	23.8	6.0	1.4	chr5	68659130	68659414	(112878845)	+	L1MC4	LINE/L1	6916	7214	(828)	3142566
375	31.4	11.1	1.9	chr5	68659430	68659894	(112878365)	C	L1MC5a	LINE/L1	(1543)	1234	722	3142567
2345	9.5	0.0	0.3	chr5	68716503	68716797	(112821462)	+	AluSx1	SINE/Alu	1	294	(18)	3142632
10921	14.3	7.2	8.0	chr5	69249858	69250901	(112287358)	C	L1M1	LINE/L1	(5213)	2352	891	3143595
15	12.4	2.6	5.0	chr5	71455695	71455733	(110082526)	+	(GCG)n	Simple_repeat	1	40	(0)	3147474
189	32.2	13.6	6.4	chr5	71646941	71647096	(109891163)	+	MIR3	SINE/MIR	38	206	(2)	3147840
241	33.3	1.6	1.6	chr5	71647270	71647397	(109890862)	C	L4_B_Mam	LINE/RTE-X	(1996)	2945	2818	3147841
312	24.3	20.3	0.8	chr5	72689748	72689875	(108848384)	C	MIR3	SINE/MIR	(52)	156	2	3149373
14	6.3	8.6	0.0	chr5	73797385	73797405	(107740854)	+	(TTTGTTA)n	Simple_repeat	1	22	(0)	3151085
1910	13.7	5.8	0.0	chr5	73797406	73797683	(107740576)	C	AluSx1	SINE/Alu	(17)	295	1	3151086
1157	0.0	0.0	0.0	chr5	73920550	73920670	(107617589)	C	AluYk12	SINE/Alu	(12)	299	179	3151235
351	6.4	0.0	0.0	chr5	73920671	73920717	(107617542)	C	L1PA8	LINE/L1	(107)	6065	6019	3151234
3586	6.1	4.5	0.0	chr5	74330647	74331070	(107207189)	C	MLT2A1	LTR/ERVL	(0)	444	1	3151818
292	32.6	2.4	1.7	chr5	75049766	75049905	(106488354)	+	MIRc	SINE/MIR	14	153	(55)	3152992
251	27.4	5.9	7.4	chr5	75049939	75050173	(106488086)	C	MIR	SINE/MIR	(48)	220	1	3152993
1396	30.3	7.8	9.2	chr5	75328369	75329138	(106209121)	C	LTR84b	LTR/ERVL	(3)	758	1	3153371
513	30.7	9.1	1.1	chr5	75514464	75514654	(106023605)	C	MIRb	SINE/MIR	(3)	265	58	3153653
955	21.0	0.0	0.0	chr5	75514721	75514877	(106023382)	+	AluJr	SINE/Alu	139	295	(17)	3153654
722	29.1	17.0	3.5	chr5	76496175	76496630	(105041629)	C	MLT1F2	LTR/ERVL-MaLR	(30)	530	1	3155123
128	0.0	4.0	2.6	chr5	76496687	76496836	(105041423)	+	(TTTC)n	Simple_repeat	1	156	(0)	3155124
2289	8.6	2.3	0.7	chr5	76739260	76739560	(104798699)	+	AluSq2	SINE/Alu	1	306	(7)	3155493
649	27.0	4.2	0.4	chr5	77292484	77292732	(104245527)	C	L1M5	LINE/L1	(577)	5547	5289	3156489
2099	11.9	2.1	0.0	chr5	78147756	78148041	(103390218)	+	AluSx	SINE/Alu	2	293	(19)	3157671
813	26.7	9.1	5.5	chr5	78148335	78148692	(103389567)	C	L1MEj	LINE/L1	(303)	1857	1494	3157670
1031	29.0	13.6	3.1	chr5	78243421	78244131	(103294128)	C	L2a	LINE/L2	(4)	3422	2558	3157807
1971	11.2	0.0	6.9	chr5	78244132	78244435	(103293824)	+	AluSx1	SINE/Alu	21	303	(9)	3157808
1559	19.4	1.8	2.1	chr5	78273118	78273400	(103264859)	+	AluJb	SINE/Alu	1	282	(30)	3157845
254	31.4	8.0	1.1	chr5	78273407	78273593	(103264666)	+	L1MEc	LINE/L1	181	381	(6019)	3157846
244	29.6	0.0	4.8	chr5	78334653	78334755	(103203504)	C	LTR103_Mam	LTR/ERV1?	(375)	100	3	3157962
2134	17.1	4.7	0.3	chr5	78819912	78820298	(102717961)	+	MLT1A1	LTR/ERVL-MaLR	1	405	(3)	3158658
1488	9.6	0.0	0.0	chr5	78820390	78820576	(102717683)	+	AluSx1	SINE/Alu	112	298	(14)	3158659
397	29.8	5.5	4.1	chr5	78896271	78896538	(102641721)	+	MamGypLTR2b	LTR/Gypsy	521	920	(2)	3158750
1841	11.7	0.0	0.0	chr5	79255149	79255396	(102282863)	C	AluSx1	SINE/Alu	(64)	248	1	3159430
11870	12.9	5.0	3.9	chr5	79255397	79256522	(102281737)	C	L1M1	LINE/L1	(5410)	2155	1008	3159426
398	23.4	2.7	0.9	chr5	79263263	79263370	(102274889)	C	LTR23	LTR/ERV1	(5)	432	323	3159444
1601	16.7	5.7	0.4	chr5	79263390	79263670	(102274589)	C	AluJb	SINE/Alu	(7)	305	9	3159445
1142	16.9	13.4	8.1	chr5	79263686	79263801	(102274458)	C	AluJo	SINE/Alu	(21)	291	137	3159446
2550	6.3	0.3	0.0	chr5	79611683	79611982	(101926277)	C	AluSg	SINE/Alu	(9)	301	1	3160093
31	21.7	0.0	0.0	chr5	79612336	79612399	(101925860)	+	G-rich	Low_complexity	1	64	(0)	3160094
386	17.3	4.5	0.6	chr5	80600059	80600917	(100937342)	+	(AT)n	Simple_repeat	1	893	(0)	3161877
234	19.7	2.9	10.8	chr5	80600968	80601041	(100937218)	+	Charlie4z	DNA/hAT-Charlie	43	110	(57)	3161878
345	23.2	0.0	0.0	chr5	80601200	80601268	(100936991)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	526	3161879
2147	13.7	0.3	0.0	chr5	80601275	80601573	(100936686)	+	AluSx	SINE/Alu	1	300	(12)	3161880
531	33.4	12.0	4.5	chr5	81300410	81300982	(100237277)	C	L2c	LINE/L2	(109)	3278	2649	3162952
193	27.2	15.0	0.8	chr5	81301263	81301388	(100236871)	+	L2b	LINE/L2	3017	3163	(212)	3162953
206	23.8	13.1	3.6	chr5	81301405	81301487	(100236772)	+	L2b	LINE/L2	3239	3330	(45)	3162953
441	31.9	9.1	12.8	chr5	82597429	82597874	(98940385)	+	LTR33	LTR/ERVL	29	456	(59)	3164847
410	26.7	7.8	6.5	chr5	82952451	82952666	(98585593)	+	MER20B	DNA/hAT-Charlie	1	219	(0)	3165330
12	9.1	7.7	4.8	chr5	84384811	84384849	(97153410)	+	G-rich	Low_complexity	1	42	(0)	3167185
15	17.6	6.7	0.0	chr5	84384898	84384942	(97153317)	+	(GCCC)n	Simple_repeat	1	48	(0)	3167186
36	18.7	5.8	0.0	chr5	84384961	84385047	(97153212)	+	(TC)n	Simple_repeat	1	92	(0)	3167187
549	27.6	4.3	4.7	chr5	84425594	84425848	(97112411)	+	MER34B	LTR/ERV1	293	546	(19)	3167256
20322	16.3	2.4	1.6	chr5	85604202	85608446	(95929813)	+	L1M1	LINE/L1	12	4286	(3279)	3168712
427	28.6	13.3	3.2	chr5	87413209	87413396	(94124863)	C	L2a	LINE/L2	(240)	3186	2977	3171096
21	18.4	4.9	4.7	chr5	88269143	88269223	(93269036)	+	G-rich	Low_complexity	1	85	(0)	3172087
107	3.6	0.9	0.0	chr5	88676322	88676436	(92861823)	+	(TCC)n	Simple_repeat	1	116	(0)	3172658
693	27.7	14.7	5.2	chr5	90476708	90477050	(91061209)	+	L2a	LINE/L2	3038	3418	(8)	3174835
249	29.1	7.9	3.2	chr5	91261091	91261246	(90277013)	+	L1M4a1	LINE/L1	17	180	(2399)	3175898
28	0.0	0.0	0.0	chr5	91261261	91261287	(90276972)	+	(T)n	Simple_repeat	1	27	(0)	3175899
400	30.9	4.4	1.7	chr5	91261326	91261503	(90276756)	+	L1MEb	LINE/L1	257	439	(5631)	3175900
577	28.3	0.7	0.0	chr5	91349138	91349275	(90188984)	C	MIR	SINE/MIR	(108)	154	16	3176111
1666	20.6	5.2	2.8	chr5	91349322	91349716	(90188543)	+	MLT1A1	LTR/ERVL-MaLR	4	408	(0)	3176115
13	4.5	0.0	7.4	chr5	92527781	92527807	(89010452)	+	(GGGT)n	Simple_repeat	1	27	(0)	3177574
568	26.4	6.6	8.2	chr5	96401598	96401884	(85136375)	+	L2a	LINE/L2	3146	3409	(17)	3182511
2449	18.3	12.9	1.3	chr5	96402184	96402793	(85135466)	+	MER76	LTR/ERVL	1	691	(0)	3182512
2279	9.8	0.3	0.3	chr5	96701526	96701820	(84836439)	+	AluSz	SINE/Alu	3	297	(15)	3182984
436	20.0	6.0	1.4	chr5	96702203	96702344	(84835915)	C	L1MC4	LINE/L1	(877)	7165	7017	3182985
8462	18.0	3.2	3.9	chr5	98050248	98052580	(83485679)	+	L1MA3	LINE/L1	13	2687	(4878)	3184676
266	29.8	10.2	0.0	chr5	98768178	98768291	(82769968)	C	MIRb	SINE/MIR	(138)	130	4	3185537
13	0.0	5.0	0.0	chr5	98768494	98768513	(82769746)	+	(TGTT)n	Simple_repeat	1	21	(0)	3185538
1999	17.2	9.2	3.2	chr5	99202373	99203245	(82335014)	C	SATR1	Satellite	(10502)	6510	5516	3186161
290	24.0	3.6	16.9	chr5	99203246	99203571	(82334688)	+	SATR2	Satellite	1	281	(38)	3186163
1999	17.2	9.2	3.2	chr5	99203572	99204624	(82333635)	C	SATR1	Satellite	(11497)	5515	4316	3186161
2700	30.9	7.6	2.1	chr5	99900253	99901357	(81636902)	C	ERVL-E-int	LTR/ERVL	(1258)	4396	3162	3187045
215	29.6	16.6	0.5	chr5	101678329	101678476	(79859783)	C	MIRc	SINE/MIR	(7)	201	23	3189189
188	32.1	3.6	1.9	chr5	101678821	101678874	(79859385)	+	MamRTE1	LINE/RTE-BovB	1499	1553	(2259)	3189190
16421	17.9	3.6	1.3	chr5	102105299	102108362	(79429897)	C	L1M1	LINE/L1	(4402)	3163	27	3189715
1241	15.9	4.9	1.7	chr5	102289995	102290231	(79248028)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	188	3189940
654	17.8	8.5	0.0	chr5	102290227	102290344	(79247915)	C	FLAM_C	SINE/Alu	(13)	130	2	3189941
5495	20.1	5.0	1.3	chr5	102561733	102563830	(78974429)	+	L1MA4	LINE/L1	1238	3399	(4166)	3190295
567	16.7	2.6	0.0	chr5	103139285	103139398	(78398861)	+	L1MA3	LINE/L1	13	129	(7436)	3191038
4320	17.9	3.7	15.4	chr5	103139402	103140567	(78397692)	+	L1MA3	LINE/L1	1849	2893	(4672)	3191038
2550	14.2	4.7	0.2	chr5	106121481	106121883	(75416376)	C	MSTB	LTR/ERVL-MaLR	(4)	422	1	3194696
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
13914	15.3	3.9	0.2	chr5	107350713	107352449	(74185810)	C	L1MA3	LINE/L1	(5063)	2502	701	3196247
295	27.3	1.1	11.1	chr5	107437599	107437697	(74100562)	+	L2c	LINE/L2	3290	3378	(9)	3196349
1944	19.7	2.9	1.6	chr5	107886780	107887227	(73651032)	+	L1MC4a	LINE/L1	7429	7882	(0)	3196929
1611	18.6	11.8	0.6	chr5	109396937	109397298	(72140961)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3198929
702	27.4	14.9	1.3	chr5	112240022	112240413	(69297846)	+	L2	LINE/L2	2023	2477	(942)	3202504
348	34.0	17.1	4.1	chr5	112479764	112480057	(69058202)	+	LTR88a	LTR/Gypsy?	222	554	(262)	3202818
402	29.9	6.3	3.8	chr5	113250316	113250499	(68287760)	C	MIR3	SINE/MIR	(17)	191	3	3204012
389	28.0	8.6	4.0	chr5	115296014	115296236	(66242023)	C	MIRb	SINE/MIR	(0)	268	35	3206586
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
58	22.1	1.5	8.4	chr5	115296655	115296913	(66241346)	+	G-rich	Low_complexity	1	263	(0)	3206588
6189	17.8	5.8	2.2	chr5	118967082	118968363	(62569896)	+	L1MC4a	LINE/L1	6401	7731	(151)	3211576
12403	17.6	3.1	3.2	chr5	118968363	118970144	(62568115)	+	L1PA10	LINE/L1	24	1762	(4721)	3211577
9566	11.4	1.9	4.1	chr5	119551687	119553692	(61984567)	C	L1PA10	LINE/L1	(5)	6163	4178	3212469
35	2.8	0.0	0.0	chr5	119553693	119553729	(61984530)	+	(TCCT)n	Simple_repeat	1	37	(0)	3212470
9566	13.5	1.9	7.3	chr5	119553730	119553814	(61984445)	C	L1PA10	LINE/L1	(1969)	4177	4177	3212469
2133	15.0	9.0	1.5	chr5	119578976	119579374	(61958885)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3212507
349	30.0	6.1	6.5	chr5	119579375	119579576	(61958683)	+	L1ME5	LINE/L1	5993	6193	(1)	3212506
14	24.7	0.0	2.2	chr5	120464396	120464440	(61073819)	+	(GCGGCA)n	Simple_repeat	1	45	(0)	3213552
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
271	27.3	15.7	6.9	chr5	122320352	122320524	(59217735)	C	L2b	LINE/L2	(9)	3417	3227	3215746
27723	2.5	0.2	0.1	chr5	122509617	122515639	(59022620)	C	L1PA3	LINE/L1	(3)	6152	124	3215997
1258	17.0	14.9	16.4	chr5	122940873	122941311	(58596948)	C	MLT1D	LTR/ERVL-MaLR	(74)	431	2	3216711
6970	22.7	3.0	2.2	chr5	123770938	123773180	(57765079)	C	L1MA4	LINE/L1	(4578)	2987	25	3217819
5110	15.2	3.8	3.7	chr5	123918354	123919032	(57619227)	C	L1MA7	LINE/L1	(48)	6243	5575	3217998
1804	14.4	2.0	6.2	chr5	123919033	123919403	(57618856)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3218000
5110	14.8	2.9	2.9	chr5	123919404	123919818	(57618441)	C	L1MA7	LINE/L1	(717)	5574	5147	3217998
1540	23.3	6.8	9.2	chr5	124043321	124043883	(57494376)	+	MLT1F2	LTR/ERVL-MaLR	1	548	(12)	3218152
464	34.4	0.5	9.0	chr5	125288161	125288393	(56249866)	+	MIRb	SINE/MIR	6	218	(50)	3219852
17036	17.1	3.3	2.4	chr5	125909201	125914283	(55623976)	C	L1MA3	LINE/L1	(2075)	5490	21	3220575
1928	10.9	0.0	9.0	chr5	126019148	126019469	(55518790)	+	AluSx1	SINE/Alu	1	293	(19)	3220682
499	21.1	22.8	0.0	chr5	126019721	126019862	(55518397)	+	MER5A	DNA/hAT-Charlie	6	189	(0)	3220683
15	8.8	0.0	0.0	chr5	127290710	127290733	(54247526)	+	(GCA)n	Simple_repeat	1	24	(0)	3222644
441	37.4	4.7	2.4	chr5	128024868	128025196	(53513063)	+	MLT1L	LTR/ERVL-MaLR	143	479	(131)	3223633
331	22.1	0.0	0.0	chr5	128025217	128025293	(53512966)	+	L1MB8	LINE/L1	6091	6167	(11)	3223634
6555	18.7	5.0	2.6	chr5	128607558	128609267	(52928992)	C	L1MA3	LINE/L1	(4713)	2852	2	3224339
23	17.1	0.0	0.0	chr5	129461452	129461497	(52076762)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	3225348
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
4183	23.8	8.0	5.2	chr5	135202282	135203910	(46334349)	C	L1MC4a	LINE/L1	(4058)	2157	478	3234008
440	28.2	0.8	0.0	chr5	139240536	139240652	(42297607)	C	L2a	LINE/L2	(0)	3426	3309	3240379
249	29.0	14.6	2.6	chr5	139955854	139955993	(41582266)	+	MIRc	SINE/MIR	58	222	(46)	3241770
416	26.1	11.0	3.7	chr5	140118518	140118760	(41419499)	+	UCON4	Unknown	39	301	(2)	3242052
2186	13.6	0.0	0.0	chr5	141325677	141325978	(40212281)	+	AluSx	SINE/Alu	1	302	(10)	3243885
21	17.6	1.9	1.9	chr5	141636810	141636862	(39901397)	+	(CCCGCCG)n	Simple_repeat	1	54	(0)	3244320
375	25.9	2.7	0.9	chr5	143824931	143825039	(37713220)	+	MIR	SINE/MIR	123	233	(29)	3248323
188	26.1	0.0	0.0	chr5	143825577	143825622	(37712637)	C	MIR3	SINE/MIR	(84)	124	79	3248324
22031	8.8	0.3	0.2	chr5	145641512	145645338	(35892921)	C	L1PA7	LINE/L1	(0)	6469	2638	3251027
256	28.9	14.8	0.7	chr5	146049400	146049549	(35488710)	C	MIRc	SINE/MIR	(0)	268	94	3251776
789	26.3	4.3	0.4	chr5	150266482	150266706	(31271553)	C	MIR	SINE/MIR	(28)	234	1	3259575
11	11.1	6.9	0.0	chr5	150905565	150905593	(30632666)	+	(AATAGA)n	Simple_repeat	1	31	(0)	3260839
354	32.8	1.6	7.6	chr5	151448140	151448337	(30089922)	C	MIR3	SINE/MIR	(20)	188	3	3261886
20	13.6	0.0	8.6	chr5	154473396	154473453	(27064806)	+	GA-rich	Low_complexity	1	58	(0)	3267225
228	30.8	3.7	0.0	chr5	154941330	154941407	(26596852)	C	L2b	LINE/L2	(23)	3352	3272	3268342
1891	16.0	7.2	1.8	chr5	158240358	158240740	(23297519)	C	MLT1A1	LTR/ERVL-MaLR	(3)	405	1	3274277
331	32.7	9.8	3.9	chr5	158759678	158759906	(22778353)	+	L2a	LINE/L2	3183	3426	(0)	3275079
629	25.9	2.9	6.8	chr5	159053929	159054177	(22484082)	+	Eulor5A	DNA?	29	267	(49)	3275495
18	3.6	3.2	3.1	chr5	159208191	159208221	(22330038)	+	(AGC)n	Simple_repeat	1	32	(0)	3275706
731	24.7	6.3	1.0	chr5	159317190	159317385	(22220874)	+	MIR	SINE/MIR	40	246	(16)	3275893
2597	15.7	4.5	0.8	chr5	159682774	159683261	(21854998)	+	L1MA1	LINE/L1	1851	2357	(5208)	3276543
607	29.0	16.9	2.6	chr5	159822903	159823481	(21714778)	C	L2a	LINE/L2	(0)	3426	2738	3276785
1042	23.4	6.6	10.5	chr5	159823484	159823845	(21714414)	C	MLT1A	LTR/ERVL-MaLR	(4)	370	24	3276786
11753	19.8	3.7	6.7	chr5	163040584	163046236	(18492023)	+	L1MA4	LINE/L1	5	6263	(1299)	3281964
242	35.3	12.6	6.3	chr5	167044084	167044978	(14493281)	C	L2c	LINE/L2	(644)	2775	1830	3287729
603	21.4	3.7	0.0	chr5	168076569	168076699	(13461560)	+	L2a	LINE/L2	3291	3426	(0)	3289329
611	22.5	18.7	0.5	chr5	168076954	168077154	(13461105)	+	MIR	SINE/MIR	7	252	(10)	3289335
1765	16.5	1.1	0.4	chr5	168465549	168465856	(13072403)	C	AluJb	SINE/Alu	(0)	312	2	3290116
2149	19.6	3.7	6.0	chr5	168465857	168466299	(13071960)	C	LTR55	LTR/ERVL?	(88)	460	25	3290115
368	25.0	4.5	14.4	chr5	168543703	168543771	(12994488)	C	L1MA10	LINE/L1	(0)	6334	6272	3290283
1948	12.0	0.4	0.0	chr5	168543772	168544038	(12994221)	+	AluSx1	SINE/Alu	1	268	(44)	3290284
28	0.0	0.0	0.0	chr5	169418577	169418603	(12119656)	+	(TCAT)n	Simple_repeat	1	27	(0)	3291770
444	24.8	2.6	1.7	chr5	169418607	169418721	(12119538)	C	L2a	LINE/L2	(13)	3413	3298	3291771
1539	20.0	7.0	4.1	chr5	170542912	170543205	(10995054)	C	MLT1A0	LTR/ERVL-MaLR	(46)	319	11	3293824
1786	27.8	3.8	4.9	chr5	170543266	170544096	(10994163)	C	Tigger18a	DNA/TcMar-Tigger	(6)	846	26	3293826
300	19.1	12.8	0.0	chr5	170604231	170604298	(10933961)	C	MLT1C	LTR/ERVL-MaLR	(8)	587	510	3293945
1549	28.2	4.0	1.4	chr5	171764450	171764938	(9773321)	+	LTR16E1	LTR/ERVL	20	521	(17)	3295995
1442	22.7	0.8	6.2	chr5	172059457	172059879	(9478380)	+	LTR55	LTR/ERVL?	143	542	(6)	3296583
566	28.0	2.1	5.6	chr5	172059918	172059959	(9478300)	+	MIRb	SINE/MIR	60	98	(170)	3296587
1838	17.3	0.3	13.3	chr5	172059960	172060125	(9478134)	+	MLT1A0	LTR/ERVL-MaLR	1	156	(209)	3296588
228	24.5	10.2	0.0	chr5	172266251	172266303	(9271956)	C	L2a	LINE/L2	(308)	3067	3009	3297051
1791	17.0	2.3	2.9	chr5	172266755	172267060	(9271199)	+	AluJr4	SINE/Alu	1	304	(8)	3297053
1098	28.4	6.5	4.9	chr5	172267085	172267536	(9270723)	+	Charlie15b	DNA/hAT-Charlie	4	463	(598)	3297054
421	39.0	8.4	1.5	chr5	172886270	172886600	(8651659)	+	L2b	LINE/L2	3014	3369	(6)	3298436
721	23.7	6.2	1.9	chr5	172903634	172903848	(8634411)	C	MIR	SINE/MIR	(1)	261	37	3298473
30	18.5	0.0	0.0	chr5	172903962	172904022	(8634237)	+	(CACA)n	Simple_repeat	1	61	(0)	3298474
16	17.7	2.4	2.3	chr5	172904109	172904150	(8634109)	+	(TCCTT)n	Simple_repeat	1	43	(0)	3298475
875	20.8	5.2	2.2	chr5	172904159	172904384	(8633875)	C	L1ME3	LINE/L1	(0)	6162	5930	3298476
593	18.1	4.8	4.2	chr5	172904398	172904541	(8633718)	C	MIRb	SINE/MIR	(115)	153	9	3298477
2244	12.8	0.3	0.3	chr5	172912757	172913068	(8625191)	C	AluSx1	SINE/Alu	(0)	312	1	3298497
340	19.5	19.2	4.8	chr5	172913069	172913165	(8625094)	C	MIRb	SINE/MIR	(65)	203	81	3298496
238	34.4	4.4	0.9	chr5	172913264	172913396	(8624863)	C	L1MC5a	LINE/L1	(2270)	507	426	3298498
251	27.2	6.4	5.8	chr5	172913407	172913578	(8624681)	C	L1ME4a	LINE/L1	(232)	5892	5720	3298491
809	16.8	0.8	0.8	chr5	173420935	173421065	(8117194)	C	FLAM_C	SINE/Alu	(10)	133	3	3299561
1707	19.7	4.9	1.9	chr5	173421584	173421961	(8116298)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	3299562
206	22.0	4.8	3.3	chr5	174503881	174503941	(7034318)	C	MamRTE1	LINE/RTE-BovB	(2552)	1260	1199	3301609
225	13.5	0.0	0.0	chr5	174504596	174504632	(7033627)	C	MER121	DNA/hAT?	(208)	193	157	3301610
2287	15.1	5.6	0.5	chr5	174745208	174745594	(6792665)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3302143
13	14.4	2.3	6.7	chr5	176724356	176724399	(4813860)	+	A-rich	Low_complexity	1	45	(0)	3305868
433	27.8	3.6	14.2	chr5	176724500	176724717	(4813542)	C	L1MC4a	LINE/L1	(2013)	5869	5676	3305869
476	30.4	3.2	4.6	chr5	176724747	176724960	(4813299)	+	L1ME4b	LINE/L1	610	824	(68)	3305870
2317	8.5	0.0	0.0	chr5	177003373	177003654	(4534605)	+	AluSg	SINE/Alu	1	282	(28)	3306393
29	0.0	3.2	0.0	chr5	177003655	177003685	(4534574)	+	(AAAC)n	Simple_repeat	1	32	(0)	3306394
1518	17.4	3.1	0.4	chr5	177003853	177004105	(4534154)	C	AluJb	SINE/Alu	(29)	283	24	3306395
229	30.7	6.5	0.0	chr5	177352431	177352531	(4185728)	+	Charlie8	DNA/hAT-Charlie	1	108	(2320)	3307239
73	1.2	3.6	1.1	chr5	177371042	177371125	(4167134)	+	(GGGCCG)n	Simple_repeat	1	87	(0)	3307276
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
563	8.4	0.0	0.0	chr5	177837767	177837837	(3700422)	+	AluSc	SINE/Alu	208	278	(31)	3308061
46	0.0	0.0	0.0	chr5	177837839	177837880	(3700379)	+	(AAAT)n	Simple_repeat	1	42	(0)	3308062
2438	6.7	0.6	2.5	chr5	178129659	178129973	(3408286)	C	AluSx1	SINE/Alu	(1)	311	3	3308613
2566	4.3	0.0	0.0	chr5	178129976	178130275	(3407984)	C	AluYf1	SINE/Alu	(11)	300	1	3308614
429	28.7	6.2	0.8	chr5	178250310	178250432	(3287827)	C	MIRb	SINE/MIR	(120)	148	19	3308869
274	33.3	2.6	3.2	chr5	178250546	178250700	(3287559)	+	L1M5	LINE/L1	2638	2791	(3355)	3308870
418	27.2	10.9	1.3	chr5	178487965	178488113	(3050146)	+	MIRb	SINE/MIR	82	246	(22)	3309262
257	23.4	1.8	0.2	chr5	178547460	178548076	(2990183)	+	(CA)n	Simple_repeat	1	628	(0)	3309374
327	9.1	0.0	0.0	chr5	178548077	178548120	(2990139)	+	MLT2C1	LTR/ERVL	513	556	(4)	3309373
248	32.5	8.2	5.4	chr5	178548287	178548510	(2989749)	+	L2	LINE/L2	2390	2620	(799)	3309375
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
1314	23.3	7.9	0.3	chr5	178827461	178827848	(2710411)	+	MER63B	DNA/hAT-Blackjack	17	436	(0)	3309880
221	35.9	9.0	4.0	chr5	178827900	178828047	(2710212)	C	L2c	LINE/L2	(178)	3209	3054	3309881
2453	7.4	1.0	0.0	chr5	178828172	178828469	(2709790)	+	AluY	SINE/Alu	2	302	(9)	3309882
2356	19.5	4.8	3.3	chr5	178858901	178859711	(2678548)	C	L1MA9	LINE/L1	(534)	5778	4872	3309952
1864	26.0	5.9	12.2	chr5	179290484	179290669	(2247590)	+	L1MC4a	LINE/L1	7710	7879	(3)	3310599
427	20.9	3.2	0.0	chr5	179290782	179290903	(2247356)	C	L2b	LINE/L2	(320)	3106	2973	3310601
871	27.9	11.7	0.0	chr5	179290941	179291256	(2247003)	+	FordPrefect	DNA/hAT-Tip100	179	536	(1147)	3310602
11	27.9	1.6	4.8	chr5	180619104	180619165	(919094)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3312984
17	26.4	4.6	1.5	chr5	180619152	180619216	(919043)	+	(GC)n	Simple_repeat	1	68	(0)	3312985
2121	12.2	0.0	0.0	chr5	181098807	181099102	(439157)	C	AluSc5	SINE/Alu	(13)	296	1	3313642
20	0.0	0.0	0.0	chr5	181207444	181207465	(330794)	+	(A)n	Simple_repeat	1	22	(0)	3313852
671	1.3	0.0	0.0	chr5	181207755	181207830	(330429)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	3313853
197	17.1	0.0	0.0	chr5	181217791	181217825	(320434)	+	MIR	SINE/MIR	105	139	(123)	3313880
198	30.2	5.4	0.0	chr6	234551	234662	(170571317)	C	MIRc	SINE/MIR	(121)	147	29	3314558
2415	12.5	0.0	0.6	chr6	235207	235518	(170570461)	C	AluSx	SINE/Alu	(2)	310	1	3314564
2771	20.3	6.2	2.1	chr6	1435798	1436366	(169369613)	+	L1MB3	LINE/L1	5604	6181	(2)	3316102
12	22.7	6.4	0.0	chr6	1609987	1610033	(169195946)	+	(CGGCGCC)n	Simple_repeat	1	50	(0)	3316388
275	26.5	17.6	0.0	chr6	1632929	1633045	(169172934)	+	MIRb	SINE/MIR	51	192	(76)	3316402
229	28.9	7.8	0.0	chr6	2037529	2037611	(168768368)	C	MLT1I	LTR/ERVL-MaLR	(317)	94	5	3316883
229	34.2	4.2	0.0	chr6	2618585	2618698	(168187281)	C	MamRep434	DNA/TcMar-Tigger	(17)	409	291	3317693
359	31.2	5.5	4.5	chr6	2618911	2619210	(168186769)	C	MamGypLTR1c	LTR/Gypsy	(492)	321	16	3317694
550	32.6	16.1	1.3	chr6	2846674	2847049	(167958930)	+	L2b	LINE/L2	2934	3375	(0)	3317997
2820	16.9	13.4	1.5	chr6	3166113	3166761	(167639218)	+	MER4CL34	LTR/ERV1	1	738	(27)	3318503
2319	6.5	0.0	2.0	chr6	7141943	7142234	(163663745)	+	AluSq	SINE/Alu	14	299	(14)	3324673
5347	24.2	8.3	4.2	chr6	7755016	7757147	(163048832)	C	L1MEc	LINE/L1	(3935)	2465	245	3325677
1926	18.6	10.4	1.2	chr6	7757195	7757613	(163048366)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	3325680
46	2.3	0.0	0.0	chr6	8590442	8590485	(162215494)	+	(AC)n	Simple_repeat	1	44	(0)	3326936
70	0.0	0.0	0.0	chr6	9842318	9842379	(160963600)	+	(ATCT)n	Simple_repeat	1	62	(0)	3328606
7898	10.7	2.0	0.5	chr6	9953590	9954944	(160851035)	C	L1PREC2	LINE/L1	(694)	5474	4106	3328743
2463	7.4	0.3	0.7	chr6	10322463	10322772	(160483207)	C	AluSp	SINE/Alu	(4)	309	1	3329304
226	19.4	19.1	0.0	chr6	10362137	10362208	(160443771)	+	BLACKJACK	DNA/hAT-Blackjack	2856	2944	(25)	3329388
189	21.1	5.0	0.0	chr6	10362516	10362553	(160443426)	+	MamSINE1	SINE/tRNA-RTE	209	248	(42)	3329389
181	23.3	5.5	8.5	chr6	10362554	10362603	(160443376)	+	MamRTE1	LINE/RTE-BovB	238	320	(3492)	3329390
18	11.7	2.6	2.5	chr6	12849835	12849873	(157956106)	+	(TAAT)n	Simple_repeat	1	40	(0)	3333293
632	15.5	5.7	8.6	chr6	16767183	16767271	(154038708)	+	MER33	DNA/hAT-Charlie	240	323	(1)	3340023
2273	25.7	4.3	4.3	chr6	16791470	16792190	(154013789)	+	L1MD1	LINE/L1	116	1019	(5614)	3340058
5124	20.7	9.8	11.2	chr6	17740027	17741230	(153064749)	C	L1M2a	LINE/L1	(5223)	1945	685	3341706
23	14.1	1.6	6.3	chr6	17987521	17987582	(152818397)	+	(CGC)n	Simple_repeat	1	63	(0)	3342185
311	30.1	0.0	10.2	chr6	18901967	18902103	(151903876)	C	MIR	SINE/MIR	(24)	238	116	3343746
12269	10.9	3.0	0.8	chr6	20449618	20452332	(150353647)	C	L1PA13	LINE/L1	(4)	6159	3374	3346064
700	27.6	11.3	2.9	chr6	20800174	20800530	(150005449)	+	L1ME1	LINE/L1	5692	6080	(99)	3346638
1707	18.3	3.2	0.0	chr6	20800641	20800913	(150005066)	C	AluJo	SINE/Alu	(30)	282	1	3346639
502	26.8	4.2	5.7	chr6	21720359	21720552	(149085427)	+	MIR	SINE/MIR	72	262	(0)	3348170
1941	9.1	0.0	0.0	chr6	21720856	21721098	(149084881)	C	AluSx	SINE/Alu	(69)	243	1	3348171
384	29.4	15.2	3.6	chr6	22030216	22030709	(148775270)	C	L1ME4a	LINE/L1	(6)	6118	5558	3348740
12206	15.0	2.2	2.6	chr6	24261910	24265000	(146540979)	+	L1M1	LINE/L1	17	3783	(3782)	3351612
1839	15.2	2.7	2.4	chr6	24275867	24276163	(146529816)	C	AluJr	SINE/Alu	(9)	303	6	3351626
2037	20.0	13.9	0.9	chr6	25205603	25206253	(145599726)	+	L1M4c	LINE/L1	1086	1834	(4550)	3353247
299	21.2	13.4	1.3	chr6	25206254	25206352	(145599627)	+	AluJb	SINE/Alu	20	204	(98)	3353248
30	0.0	0.0	0.0	chr6	25206392	25206417	(145599562)	+	(CA)n	Simple_repeat	1	26	(0)	3353249
128	4.5	9.5	0.0	chr6	25206435	25206665	(145599314)	+	(TA)n	Simple_repeat	1	253	(0)	3353250
1710	10.9	11.9	1.1	chr6	26104525	26104800	(144701179)	+	AluSz	SINE/Alu	2	311	(1)	3354639
443	24.1	3.3	12.6	chr6	26323092	26323290	(144482689)	+	MER5A	DNA/hAT-Charlie	9	188	(1)	3355025
417	25.4	7.0	10.7	chr6	26323448	26323924	(144482055)	+	L1MC5a	LINE/L1	1869	2279	(498)	3355026
18	17.1	0.0	0.0	chr6	26420709	26420741	(144385238)	+	(GT)n	Simple_repeat	1	33	(0)	3355211
181	28.1	6.8	6.8	chr6	26420798	26420885	(144385094)	+	L2c	LINE/L2	3256	3343	(44)	3355212
16	4.5	4.3	0.0	chr6	26421194	26421216	(144384763)	+	(GA)n	Simple_repeat	1	24	(0)	3355213
4484	7.9	2.5	0.0	chr6	27792718	27793312	(143012667)	C	LTR71B	LTR/ERV1	(0)	610	1	3357601
825	25.2	12.9	2.7	chr6	28123822	28124266	(142681713)	+	L1ME4b	LINE/L1	193	689	(203)	3358108
1656	21.2	6.0	5.2	chr6	28407374	28407820	(142398159)	C	MER74C	LTR/ERVL	(0)	460	10	3358570
210	13.7	8.9	5.6	chr6	28407836	28407889	(142398090)	+	MIRc	SINE/MIR	89	144	(124)	3358571
188	25.5	2.1	0.0	chr6	28407988	28408034	(142397945)	+	X6A_LINE	LINE/CR1	109	156	(924)	3358572
7905	6.3	0.8	0.4	chr6	28491047	28492049	(142313930)	+	LTR13	LTR/ERVK	1	1007	(0)	3358718
585	6.9	0.0	0.0	chr6	28643445	28643516	(142162463)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3358957
57	3.6	2.1	6.1	chr6	28643792	28643887	(142162092)	+	(AT)n	Simple_repeat	1	98	(0)	3358958
60739	13.7	1.0	1.0	chr6	28766731	28773949	(142032030)	C	HERVS71-int	LTR/ERV1	(41)	8937	1693	3359190
11351	21.8	2.4	3.3	chr6	30180856	30182334	(140623645)	C	L1M2	LINE/L1	(5047)	2519	914	3361200
2422	6.5	0.7	1.0	chr6	30515734	30516039	(140289940)	C	AluSp	SINE/Alu	(8)	305	1	3361727
1795	13.3	0.7	9.1	chr6	30516755	30517084	(140288895)	C	AluSx1	SINE/Alu	(10)	302	1	3361728
286	20.8	0.4	1.5	chr6	30541777	30541841	(140264138)	+	MamRep38	DNA/hAT	240	295	(0)	3361777
550	32.0	18.3	2.1	chr6	30541842	30543199	(140262780)	+	L2c	LINE/L2	1599	3246	(129)	3361778
1728	18.5	8.2	8.9	chr6	30780576	30781026	(140024953)	C	MER83	LTR/ERV1	(0)	448	1	3362212
379	26.1	7.8	12.7	chr6	30781028	30781125	(140024854)	C	MIRb	SINE/MIR	(21)	247	166	3362214
2314	10.3	0.0	0.0	chr6	30781126	30781417	(140024562)	C	AluSc	SINE/Alu	(17)	292	1	3362215
12	16.8	3.7	7.1	chr6	31806831	31806884	(138999095)	+	(AGCGCG)n	Simple_repeat	1	56	(0)	3363932
652	17.6	3.7	5.1	chr6	31834263	31834400	(138971579)	C	AluJb	SINE/Alu	(176)	136	1	3363975
14	10.4	3.0	2.9	chr6	31834405	31834437	(138971542)	+	(TTTTG)n	Simple_repeat	1	34	(0)	3363980
18	4.1	0.0	6.9	chr6	31834547	31834575	(138971404)	+	(GC)n	Simple_repeat	1	29	(0)	3363981
1405	18.4	9.1	0.9	chr6	32244359	32244681	(138561298)	+	MLT1A1	LTR/ERVL-MaLR	3	354	(54)	3364622
1787	8.1	17.1	0.0	chr6	32244682	32244929	(138561050)	C	AluSz	SINE/Alu	(10)	302	4	3364623
467	31.5	8.9	0.9	chr6	32940454	32940651	(137865328)	C	L2b	LINE/L2	(4)	3422	3214	3365635
2273	7.7	0.0	4.8	chr6	33570197	33570508	(137235471)	+	AluSx3	SINE/Alu	1	297	(14)	3366758
17	12.7	0.0	0.0	chr6	33570604	33570629	(137235350)	+	(A)n	Simple_repeat	1	26	(0)	3366759
820	27.3	10.5	3.2	chr6	33570669	33571073	(137234906)	+	Charlie13a	DNA/hAT-Charlie	447	884	(630)	3366760
969	24.6	8.4	10.7	chr6	33815658	33816145	(136989834)	C	LTR33A	LTR/ERVL	(2)	518	43	3367158
2439	9.9	0.0	0.0	chr6	33816227	33816538	(136989441)	C	AluSx	SINE/Alu	(0)	312	1	3367159
515	33.9	11.5	2.2	chr6	34521732	34521960	(136284019)	C	MIR	SINE/MIR	(1)	261	9	3368592
332	32.5	9.9	2.0	chr6	34957807	34958001	(135847978)	+	MIRc	SINE/MIR	19	230	(38)	3369534
13	14.9	3.3	0.0	chr6	35397345	35397374	(135408605)	+	(ACC)n	Simple_repeat	1	31	(0)	3370283
259	35.3	11.7	2.9	chr6	35726872	35727151	(135078828)	C	L2c	LINE/L2	(58)	3329	3022	3371014
315	23.4	12.6	3.5	chr6	36013881	36013995	(134791984)	C	MIR3	SINE/MIR	(76)	132	6	3371639
1783	11.3	0.4	0.8	chr6	37325541	37325815	(133480164)	C	AluSx3	SINE/Alu	(0)	311	35	3374487
2338	9.2	0.7	0.0	chr6	37326100	37326394	(133479585)	+	AluSc5	SINE/Alu	1	297	(12)	3374488
321	18.7	5.1	1.3	chr6	37361869	37361944	(133444035)	C	MIR3	SINE/MIR	(42)	166	88	3374559
8649	15.8	6.7	0.7	chr6	37961095	37962486	(132843493)	+	L1M1	LINE/L1	1145	2631	(4934)	3375690
1957	8.1	13.3	0.0	chr6	38317935	38318194	(132487785)	C	AluSx	SINE/Alu	(12)	300	1	3376184
22249	11.9	3.0	1.5	chr6	38318195	38320359	(132485620)	C	L1MA3	LINE/L1	(5362)	2203	12	3376175
12	28.0	3.5	1.7	chr6	39085354	39085411	(131720568)	+	(CCCT)n	Simple_repeat	1	60	(0)	3377440
20	22.9	3.5	1.7	chr6	39085550	39085607	(131720372)	+	(TC)n	Simple_repeat	1	60	(0)	3377441
270	26.8	10.4	1.1	chr6	39218951	39219037	(131586942)	+	L2b	LINE/L2	3274	3369	(6)	3377669
215	23.9	24.0	4.3	chr6	39219318	39219479	(131586500)	C	MIRb	SINE/MIR	(20)	248	45	3377670
1561	18.3	9.0	0.0	chr6	39377065	39377348	(131428631)	C	AluJr	SINE/Alu	(0)	312	1	3377970
1124	29.0	5.0	1.4	chr6	41317812	41318418	(129487561)	C	MERX	DNA/TcMar-Tigger	(49)	707	1	3380942
659	23.9	2.3	0.6	chr6	41318581	41318748	(129487231)	+	MER5B	DNA/hAT-Charlie	7	177	(1)	3380943
2148	10.2	0.7	0.0	chr6	42075928	42076232	(128729747)	+	AluSc8	SINE/Alu	1	307	(4)	3382476
18	4.5	0.0	0.0	chr6	42345320	42345342	(128460637)	+	(CA)n	Simple_repeat	1	23	(0)	3383063
12	11.5	3.3	3.2	chr6	43076534	43076563	(127729416)	+	(CTG)n	Simple_repeat	1	31	(0)	3384639
381	30.1	2.2	6.9	chr6	43263461	43263649	(127542330)	C	L2c	LINE/L2	(177)	3210	3031	3385025
337	34.8	17.7	2.3	chr6	43263684	43264105	(127541874)	C	L2c	LINE/L2	(465)	2954	2435	3385025
2471	8.4	0.0	1.6	chr6	45050879	45051188	(125754791)	C	AluYj4	SINE/Alu	(6)	305	1	3388096
1729	28.6	15.9	10.3	chr6	45051189	45052101	(125753878)	C	L2	LINE/L2	(1750)	1669	702	3388088
1202	15.0	2.9	5.7	chr6	45552178	45552389	(125253590)	C	MER20	DNA/hAT-Charlie	(12)	207	2	3388781
238	17.5	1.7	1.7	chr6	46454092	46454149	(124351830)	+	MamTip2	DNA/hAT-Tip100	74	131	(174)	3390214
1033	17.1	1.1	1.6	chr6	47146174	47146363	(123659616)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3391309
442	29.9	2.0	0.7	chr6	47235920	47236067	(123569912)	C	L2	LINE/L2	(619)	2800	2651	3391440
222	16.5	6.9	9.5	chr6	47236089	47236181	(123569798)	C	MIRb	SINE/MIR	(153)	115	20	3391441
12	25.5	3.8	1.8	chr6	47309443	47309495	(123496484)	+	(GGCTGC)n	Simple_repeat	1	55	(0)	3391551
3242	15.6	5.0	0.5	chr6	47529237	47529810	(123276169)	+	MER6A	DNA/TcMar-Tigger	5	605	(0)	3391907
451	34.7	6.2	6.2	chr6	47529885	47530188	(123275791)	+	L2c	LINE/L2	2938	3241	(146)	3391908
17332	16.0	3.1	1.0	chr6	50030281	50036334	(120769645)	+	L1PA16	LINE/L1	311	6494	(9)	3395194
2196	13.4	0.7	0.0	chr6	52199467	52199772	(118606207)	+	AluSx	SINE/Alu	1	308	(4)	3398134
3347	24.2	7.1	8.4	chr6	52199773	52199786	(118606193)	+	HAL1	LINE/L1	862	869	(1638)	3398133
4254	17.9	10.6	3.5	chr6	52199787	52200778	(118605201)	C	MER11C	LTR/ERVK	(0)	1071	1	3398135
2057	14.9	2.5	0.3	chr6	53042682	53043031	(117762948)	+	L1MC4a	LINE/L1	7524	7881	(1)	3399447
2563	8.1	0.0	0.0	chr6	53349855	53350164	(117455815)	C	AluSx	SINE/Alu	(2)	310	1	3400039
39	0.0	0.0	0.0	chr6	55069050	55069085	(115736894)	+	(TATTT)n	Simple_repeat	1	36	(0)	3402472
262	16.0	0.0	0.0	chr6	55069089	55069138	(115736841)	+	L1M2	LINE/L1	4320	4369	(1774)	3402473
11907	16.1	2.3	3.7	chr6	56377289	56379375	(114426604)	+	L1M1	LINE/L1	196	2271	(5294)	3404106
9486	20.1	3.0	2.0	chr6	56387347	56389080	(114416899)	+	L1M1	LINE/L1	12	2437	(5128)	3404121
227	35.0	7.1	5.7	chr6	57672101	57672582	(113133397)	+	L2c	LINE/L2	2720	3202	(185)	3405958
1988	17.6	0.0	0.0	chr6	57672631	57672925	(113133054)	C	AluJb	SINE/Alu	(16)	296	2	3405959
16819	14.2	2.6	0.3	chr6	58156595	58159212	(112646767)	C	L1MA3	LINE/L1	(4689)	2876	198	3406650
20257	15.1	2.7	1.2	chr6	62934672	62939458	(107866521)	C	L1MA3	LINE/L1	(2470)	5095	224	3409815
335	33.2	6.2	3.5	chr6	64247675	64247877	(106558102)	C	MIR	SINE/MIR	(17)	245	37	3411687
43	0.0	0.0	0.0	chr6	64248184	64248220	(106557759)	+	(TG)n	Simple_repeat	1	37	(0)	3411688
15874	21.0	3.3	4.9	chr6	68569271	68573805	(102232174)	C	L1PA17	LINE/L1	(1930)	4919	484	3416833
19	9.8	0.0	2.9	chr6	71296976	71297010	(99508969)	+	(AAAAC)n	Simple_repeat	1	35	(0)	3420410
184	28.0	2.0	4.8	chr6	71297098	71297202	(99508777)	+	L2c	LINE/L2	3216	3317	(70)	3420411
597	29.5	8.5	5.6	chr6	72103878	72104415	(98701564)	C	LTR37-int	LTR/ERV1	(3152)	908	354	3421454
1759	26.0	3.1	2.2	chr6	72104461	72104876	(98701103)	C	L1M4b	LINE/L1	(6434)	433	14	3421455
541	32.0	6.0	9.7	chr6	72659170	72659411	(98146568)	+	L2	LINE/L2	2344	2580	(839)	3422146
1790	23.7	1.7	0.5	chr6	72659412	72659814	(98146165)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3422147
541	32.0	6.0	9.7	chr6	72659815	72660087	(98145892)	+	L2	LINE/L2	2581	2838	(581)	3422146
1723	17.4	3.2	1.8	chr6	72787094	72787427	(98018552)	+	MER58B	DNA/hAT-Charlie	1	339	(2)	3422335
301	29.9	1.0	2.0	chr6	72787441	72787539	(98018440)	C	MER5B	DNA/hAT-Charlie	(29)	149	52	3422336
297	22.7	3.9	0.0	chr6	72787561	72787635	(98018344)	C	MamRep605	LTR?	(333)	516	439	3422337
504	29.6	8.8	0.0	chr6	72787749	72787954	(98018025)	C	MamRep605	LTR?	(570)	279	54	3422337
3262	11.4	0.9	0.4	chr6	73097548	73098013	(97707966)	+	L1MA3	LINE/L1	1642	2109	(5456)	3422731
10797	9.9	2.4	1.9	chr6	73098014	73100384	(97705595)	+	L1MA3	LINE/L1	2217	4611	(2954)	3422731
2265	9.5	1.0	0.0	chr6	73523145	73523439	(97282540)	+	AluSz	SINE/Alu	1	298	(14)	3423646
2453	7.6	0.0	0.0	chr6	73739567	73739855	(97066124)	+	AluY	SINE/Alu	1	289	(22)	3424156
1060	17.2	7.8	12.9	chr6	75200229	75200310	(95605669)	+	MER33	DNA/hAT-Charlie	1	82	(242)	3425876
2141	10.9	0.0	0.0	chr6	75200311	75200586	(95605393)	+	AluSz6	SINE/Alu	21	296	(16)	3425877
13	23.9	0.0	4.2	chr6	75206501	75206548	(95599431)	+	(ATCTCC)n	Simple_repeat	1	48	(0)	3425882
225	19.6	16.4	0.0	chr6	75612177	75612232	(95193747)	C	MLT1H1	LTR/ERVL-MaLR	(281)	274	208	3426480
1491	16.7	0.9	0.0	chr6	75612388	75612615	(95193364)	C	AluJr	SINE/Alu	(68)	244	15	3426481
695	23.1	5.8	13.5	chr6	75612627	75612807	(95193172)	+	L1ME3C	LINE/L1	5558	5645	(478)	3426482
7282	19.5	3.1	1.6	chr6	76284402	76286082	(94519897)	C	L1MA4	LINE/L1	(3946)	3619	1913	3427499
3039	24.8	7.8	2.6	chr6	76286074	76286930	(94519049)	C	L1MA4	LINE/L1	(6647)	918	13	3427499
2641	15.8	1.8	0.0	chr6	82410095	82410524	(88395455)	C	MSTB2	LTR/ERVL-MaLR	(19)	438	1	3435135
15803	15.5	1.5	0.5	chr6	82788337	82790831	(88015148)	+	L1MA3	LINE/L1	9	2530	(5035)	3435626
16218	7.5	0.3	0.1	chr6	83495671	83500000	(87305979)	+	L1P1	LINE/L1	11	4353	(1793)	3436622
7843	4.7	0.9	0.4	chr6	83500001	83501799	(87304180)	+	L1PA5	LINE/L1	4354	6154	(0)	3436623
1608	17.6	1.7	1.4	chr6	84568299	84568644	(86237335)	+	L1MA7	LINE/L1	5929	6275	(16)	3438002
821	30.7	6.3	2.8	chr6	84568671	84569108	(86236871)	C	LTR50	LTR/ERVL	(173)	622	149	3438003
285	31.5	9.9	3.8	chr6	89896141	89896536	(80909443)	C	L2c	LINE/L2	(44)	3343	2921	3445605
63	17.2	5.1	1.8	chr6	90406033	90406189	(80399790)	+	(TA)n	Simple_repeat	1	165	(0)	3446344
312	28.7	27.9	2.1	chr6	90406272	90406533	(80399446)	C	MER110A	LTR/ERV1	(0)	468	158	3446345
303	24.0	1.3	5.1	chr6	90406772	90406850	(80399129)	C	MLT1L	LTR/ERVL-MaLR	(532)	78	3	3446346
691	37.2	8.1	1.6	chr6	90678351	90678776	(80127203)	+	MamRTE1	LINE/RTE-BovB	653	1108	(2704)	3446718
1193	19.8	19.8	3.6	chr6	92269309	92269644	(78536335)	+	MLT1A1	LTR/ERVL-MaLR	1	404	(4)	3448710
3209	23.4	12.8	2.7	chr6	94606375	94607147	(76198832)	+	L1MEc	LINE/L1	888	1807	(4595)	3451538
820	25.3	2.2	0.6	chr6	94607182	94607360	(76198619)	+	MER70A	LTR/ERVL	227	408	(64)	3451541
567	16.8	3.4	5.0	chr6	94607348	94607466	(76198513)	+	MER70A	LTR/ERVL	356	472	(0)	3451541
1021	31.4	4.8	11.7	chr6	94607475	94608109	(76197870)	+	L1MCb	LINE/L1	310	898	(5147)	3451542
7342	9.8	1.2	2.6	chr6	95386416	95387501	(75418478)	C	MER11C	LTR/ERVK	(0)	1071	1	3452404
9102	8.8	1.1	1.1	chr6	95554433	95556565	(75249414)	C	L1PA11	LINE/L1	(8)	6166	4031	3452607
15	17.6	0.0	4.8	chr6	95577454	95577495	(75228484)	+	(GCCCC)n	Simple_repeat	1	42	(0)	3452635
4883	11.7	3.2	3.5	chr6	97978783	97979621	(72826358)	+	LTR1A2	LTR/ERV1	1	837	(0)	3455725
3770	20.7	0.9	4.7	chr6	99578850	99579698	(71226281)	+	L1MC3	LINE/L1	6951	7773	(12)	3457889
2110	15.6	8.9	1.0	chr6	99579699	99580092	(71225887)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3457891
21	22.2	0.0	1.9	chr6	99614278	99614331	(71191648)	+	(CGG)n	Simple_repeat	1	54	(0)	3457943
2168	14.8	0.0	0.0	chr6	99699556	99699859	(71106120)	C	AluSz6	SINE/Alu	(8)	304	1	3458040
9418	23.4	3.2	8.8	chr6	99699860	99699988	(71105991)	C	L1MB2	LINE/L1	(1774)	5164	5044	3458038
42	0.0	0.0	0.0	chr6	99699989	99700024	(71105955)	+	(TG)n	Simple_repeat	1	36	(0)	3458041
9418	23.4	3.2	8.8	chr6	99700025	99700296	(71105683)	C	L1MB2	LINE/L1	(1895)	5043	4769	3458038
15585	16.3	3.5	1.9	chr6	102694520	102699329	(68106650)	C	L1M1	LINE/L1	(1971)	5594	703	3461833
2219	4.3	0.4	0.0	chr6	102850084	102850337	(67955642)	+	AluY	SINE/Alu	41	295	(16)	3462035
576	30.4	4.3	1.8	chr6	102850513	102850740	(67955239)	+	MIR	SINE/MIR	29	262	(0)	3462036
1188	25.9	4.2	1.7	chr6	103000265	103000470	(67805509)	C	L1MCc	LINE/L1	(5985)	438	232	3462221
5156	8.1	1.0	0.1	chr6	103000471	103001186	(67804793)	C	LTR30	LTR/ERV1	(0)	722	1	3462222
384	35.3	8.3	5.5	chr6	103155685	103155975	(67650004)	C	MamRTE1	LINE/RTE-BovB	(313)	3499	3200	3462390
2021	12.2	2.1	0.0	chr6	103156030	103156307	(67649672)	+	AluSp	SINE/Alu	1	284	(29)	3462391
19577	9.8	1.2	1.6	chr6	106812078	106814106	(63991873)	+	L1PA13	LINE/L1	3250	5279	(1487)	3467555
2471	12.1	0.3	1.1	chr6	107404439	107404805	(63401174)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3468792
2805	22.4	1.9	0.8	chr6	107404816	107405565	(63400414)	+	L1M2	LINE/L1	2133	2890	(3960)	3468796
403	33.8	19.3	1.1	chr6	108714610	108714896	(62091083)	+	L3	LINE/CR1	3039	3390	(709)	3471025
1438	19.6	1.6	0.0	chr6	108715142	108715386	(62090593)	C	AluJo	SINE/Alu	(17)	295	47	3471027
181	24.6	0.0	3.4	chr6	109691574	109691632	(61114347)	+	OldhAT1	DNA/hAT-Ac	1898	1954	(894)	3472534
23318	7.7	1.3	0.8	chr6	110116062	110122197	(60683782)	+	L1PA6	LINE/L1	5	6154	(0)	3473182
2156	11.2	0.0	4.5	chr6	111642133	111642304	(59163675)	+	AluSz	SINE/Alu	146	305	(7)	3475980
201	25.6	15.5	3.5	chr6	111642419	111642503	(59163476)	C	MIR	SINE/MIR	(159)	103	7	3475982
240	27.2	0.0	10.0	chr6	111642867	111642956	(59163023)	+	MLT1H2	LTR/ERVL-MaLR	382	462	(27)	3475983
240	24.5	5.6	4.7	chr6	112049128	112049234	(58756745)	C	MamGypLTR1b	LTR/Gypsy	(338)	446	339	3476575
417	21.9	6.3	9.1	chr6	112049268	112049501	(58756478)	C	MamGypLTR1b	LTR/Gypsy	(546)	238	2	3476575
604	34.0	4.4	6.1	chr6	112768488	112768832	(58037147)	+	L2	LINE/L2	2192	2530	(889)	3477547
271	24.3	11.2	1.0	chr6	112768993	112769096	(58036883)	C	Charlie24	DNA/hAT-Charlie	(5)	2445	2330	3477548
12	10.0	0.0	0.0	chr6	112769106	112769127	(58036852)	+	(TATG)n	Simple_repeat	1	22	(0)	3477549
310	30.8	7.4	6.1	chr6	113591729	113591918	(57214061)	C	L2c	LINE/L2	(40)	3347	3168	3478717
351	20.8	0.0	1.4	chr6	113591935	113592007	(57213972)	C	MER20	DNA/hAT-Charlie	(147)	72	1	3478718
12	16.9	0.0	0.0	chr6	113592206	113592232	(57213747)	+	A-rich	Low_complexity	1	27	(0)	3478719
1079	22.7	6.4	0.0	chr6	113592276	113592553	(57213426)	+	Arthur1C	DNA/hAT-Tip100	64	360	(3)	3478720
554	29.4	10.2	3.5	chr6	113631529	113631757	(57174222)	C	MIRb	SINE/MIR	(0)	268	23	3478786
13	4.5	4.3	0.0	chr6	114168592	114168614	(56637365)	+	(TTTC)n	Simple_repeat	1	24	(0)	3479740
1208	23.4	12.8	0.8	chr6	116028998	116029376	(54776603)	+	L2a	LINE/L2	2950	3380	(46)	3482038
181	22.4	5.8	2.0	chr6	116029451	116029500	(54776479)	C	L2a	LINE/L2	(2)	3424	3373	3482039
2288	4.4	0.4	2.5	chr6	116277661	116277934	(54528045)	+	AluSg	SINE/Alu	39	306	(4)	3482343
22758	13.7	2.6	1.0	chr6	117212105	117216446	(53589533)	C	L1MA3	LINE/L1	(3164)	4401	16	3483609
1426	20.8	6.7	6.2	chr6	118155281	118155665	(52650314)	+	MSTD	LTR/ERVL-MaLR	1	387	(9)	3484786
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2160	11.4	3.8	0.0	chr6	121162386	121162718	(49643261)	+	L1P3	LINE/L1	3973	4318	(1828)	3488615
28822	0.5	0.2	0.0	chr6	121162717	121168725	(49637254)	+	L1HS	LINE/L1	131	6155	(0)	3488616
6155	17.7	2.8	0.4	chr6	121365205	121366180	(49439799)	+	L1M1	LINE/L1	96	1085	(6480)	3488865
10907	11.8	4.4	2.5	chr6	121366171	121366833	(49439146)	+	L1M1	LINE/L1	3887	4561	(3004)	3488865
196	31.6	12.0	0.0	chr6	123058104	123058198	(47747781)	C	MIR	SINE/MIR	(1)	261	154	3491218
204	30.5	0.9	5.4	chr6	123058341	123058451	(47747528)	C	L3	LINE/CR1	(320)	3779	3674	3491219
401	30.6	4.9	9.7	chr6	123058528	123058639	(47747340)	+	L2a	LINE/L2	2734	2834	(585)	3491220
5423	22.1	4.3	7.0	chr6	123276211	123277380	(47528599)	+	MLT1C-int	LTR/ERVL-MaLR	239	1371	(0)	3491485
1209	27.1	8.3	3.0	chr6	124260138	124260772	(46545207)	C	L2a	LINE/L2	(0)	3426	2750	3492771
1513	13.8	8.4	13.6	chr6	125511282	125511685	(45294294)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3494435
1374	34.4	7.8	4.0	chr6	125511686	125511862	(45294117)	+	ERV3-16A3_I-int	LTR/ERVL	2047	2395	(3259)	3494434
1668	23.2	8.1	3.3	chr6	125512003	125512425	(45293554)	+	LTR16A1	LTR/ERVL	12	456	(0)	3494436
267	31.8	1.1	0.0	chr6	125986855	125986942	(44819037)	C	L2c	LINE/L2	(38)	3349	3261	3495121
22965	9.3	1.1	0.6	chr6	126558705	126564579	(44241400)	+	L1PA7	LINE/L1	1122	7578	(11)	3495789
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
258	32.0	3.8	5.6	chr6	128446930	128447091	(42358888)	+	L2a	LINE/L2	3255	3413	(13)	3498157
622	28.8	1.0	2.0	chr6	128447320	128447521	(42358458)	C	MIR	SINE/MIR	(0)	262	63	3498158
1864	17.6	10.8	0.2	chr6	128649417	128649832	(42156147)	+	MSTA1	LTR/ERVL-MaLR	1	465	(0)	3498463
200	30.4	1.4	0.0	chr6	128882871	128882939	(41923040)	C	MIRc	SINE/MIR	(6)	262	193	3498754
22319	8.2	1.3	0.4	chr6	129877319	129879634	(40926345)	C	L1PA8A	LINE/L1	(2)	6444	4095	3500067
33	0.0	0.0	0.0	chr6	131723828	131723855	(39082124)	+	(CA)n	Simple_repeat	1	28	(0)	3502783
5842	12.9	13.7	1.6	chr6	132109467	132110550	(38695429)	C	MER11B	LTR/ERVK	(0)	1236	1	3503410
291	28.6	9.5	1.5	chr6	132364467	132364601	(38441378)	C	MIRb	SINE/MIR	(108)	160	14	3503741
581	31.8	5.1	1.2	chr6	132364716	132364960	(38441019)	C	MIR	SINE/MIR	(4)	258	4	3503742
229	28.6	0.0	0.0	chr6	132484123	132484178	(38321801)	+	Tigger19b	DNA/TcMar-Tigger	468	523	(27)	3503885
23365	7.0	1.0	0.3	chr6	132981098	132986061	(37819918)	C	L1PA6	LINE/L1	(0)	6154	1184	3504642
54	0.0	0.0	0.0	chr6	134052251	134052296	(36753683)	+	(AC)n	Simple_repeat	1	46	(0)	3506090
317	32.2	15.7	0.2	chr6	134407992	134408168	(36397811)	+	MIR	SINE/MIR	16	214	(48)	3506852
1572	19.1	9.8	3.7	chr6	135835853	135836233	(34969746)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	2	3509005
1103	31.8	8.5	3.9	chr6	136403523	136404316	(34401663)	+	L4_C_Mam	LINE/RTE-X	1612	2445	(2693)	3509829
29	0.0	0.0	0.0	chr6	136792542	136792569	(34013410)	+	(CGCCG)n	Simple_repeat	1	28	(0)	3510466
408	37.4	9.4	0.4	chr6	137688320	137688550	(33117429)	+	MIRb	SINE/MIR	1	254	(14)	3511823
631	31.9	6.0	0.8	chr6	137688585	137688837	(33117142)	C	L3	LINE/CR1	(2240)	1859	1593	3511819
1807	13.8	3.0	3.9	chr6	138116182	138116486	(32689493)	C	AluJb	SINE/Alu	(10)	302	1	3512483
2076	18.0	4.2	0.8	chr6	138800774	138801159	(32004820)	C	MLT1A1	LTR/ERVL-MaLR	(8)	400	1	3513575
48	0.0	0.0	0.0	chr6	138947036	138947076	(31858903)	+	(CT)n	Simple_repeat	1	41	(0)	3513826
1616	12.3	14.7	2.4	chr6	138947077	138947243	(31858736)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	3513825
18	7.6	0.0	0.0	chr6	138947374	138947401	(31858578)	+	(CAAA)n	Simple_repeat	1	28	(0)	3513827
548	28.7	1.9	1.1	chr6	139764173	139764336	(31041643)	+	MIRb	SINE/MIR	7	177	(53)	3515181
1382	24.2	2.5	5.1	chr6	140357439	140357926	(30448053)	C	L1ME1	LINE/L1	(22)	6157	5683	3515954
1724	19.6	2.8	1.7	chr6	140358056	140358512	(30447467)	C	L1ME1	LINE/L1	(504)	5675	5215	3515954
325	29.8	0.0	0.0	chr6	142325449	142325532	(28480447)	+	Tigger16b	DNA/TcMar-Tigger	204	287	(49)	3518365
258	21.8	13.0	0.0	chr6	142475010	142475096	(28330883)	C	L2a	LINE/L2	(12)	3414	3315	3518561
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
1594	30.6	10.8	1.6	chr6	143688399	143689395	(27116584)	+	L2a	LINE/L2	2339	3426	(0)	3520273
449	33.3	0.7	2.0	chr6	144266496	144266642	(26539337)	C	MIR3	SINE/MIR	(6)	202	58	3521135
17	12.8	2.9	0.0	chr6	144665570	144665614	(26140365)	+	(AATA)n	Simple_repeat	1	46	(0)	3521722
793	34.5	15.8	0.6	chr6	144665803	144666318	(26139661)	C	MamRTE1	LINE/RTE-BovB	(275)	3537	2929	3521723
938	24.8	4.9	7.0	chr6	146415933	146416645	(24389334)	C	L1ME2	LINE/L1	(3741)	3493	2801	3523999
656	29.1	3.1	11.7	chr6	146416647	146417031	(24388948)	C	L1ME2	LINE/L1	(5627)	1706	1356	3523999
685	37.1	4.7	0.9	chr6	146417041	146417366	(24388613)	C	L1ME2	LINE/L1	(5895)	340	2	3523999
336	21.5	6.1	5.1	chr6	147892173	147892270	(22913709)	C	L2a	LINE/L2	(1)	3425	3327	3526048
13	23.3	0.0	0.0	chr6	148578234	148578268	(22227711)	+	(TTCAA)n	Simple_repeat	1	35	(0)	3527144
2078	15.6	9.2	4.9	chr6	148599895	148600319	(22205660)	C	MER67D	LTR/ERV1	(2)	512	68	3527177
2079	9.3	0.0	7.4	chr6	148600321	148600631	(22205348)	+	AluSc	SINE/Alu	8	295	(14)	3527178
247	23.9	3.5	5.5	chr6	149211745	149211844	(21594135)	C	MLT1J1	LTR/ERVL-MaLR	(0)	411	320	3528066
338	23.6	5.2	5.9	chr6	149211926	149212060	(21593919)	C	MLT1J1	LTR/ERVL-MaLR	(240)	204	71	3528066
56	30.4	1.3	2.6	chr6	149317862	149318010	(21487969)	+	(GCG)n	Simple_repeat	28	230	(0)	3528247
223	21.1	24.0	1.0	chr6	149440781	149440876	(21365103)	+	L2a	LINE/L2	3302	3426	(0)	3528437
28	24.9	2.0	2.9	chr6	149566288	149566388	(21239591)	+	(CCCGC)n	Simple_repeat	1	100	(0)	3528682
1208	21.8	10.4	4.3	chr6	149585891	149586055	(21219924)	C	MER119	DNA/hAT-Charlie	(204)	379	218	3528721
2291	14.4	3.5	5.9	chr6	149586056	149586498	(21219481)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	3528723
2084	14.9	0.0	0.0	chr6	150508327	150508622	(20297357)	C	AluSx	SINE/Alu	(14)	298	3	3530327
2979	17.5	1.9	3.6	chr6	150508726	150509300	(20296679)	+	MER4D	LTR/ERV1	1	565	(338)	3530328
28	19.6	2.0	6.9	chr6	151391701	151391800	(19414179)	+	(GCC)n	Simple_repeat	1	102	(0)	3531915
2139	11.7	2.0	0.7	chr6	153391007	153391306	(17414673)	C	AluSq2	SINE/Alu	(9)	304	1	3534862
2257	32.1	7.5	4.5	chr6	153391307	153391690	(17414289)	C	L1MCc	LINE/L1	(5352)	1071	663	3534860
2211	15.1	2.2	0.0	chr6	153391691	153392047	(17413932)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3534863
190	28.0	4.5	4.5	chr6	154478184	154478404	(16327575)	+	L2c	LINE/L2	2938	3158	(229)	3536469
1283	14.3	1.4	4.5	chr6	154548864	154549086	(16256893)	C	AluJo	SINE/Alu	(10)	302	87	3536594
50	0.0	0.0	0.0	chr6	154549109	154549151	(16256828)	+	(AC)n	Simple_repeat	1	43	(0)	3536595
4099	10.8	2.1	5.5	chr6	156359412	156360045	(14445934)	+	LTR9	LTR/ERV1	1	612	(0)	3539341
1355	25.5	7.9	5.0	chr6	156360046	156360352	(14445627)	+	MER70A	LTR/ERVL	162	472	(0)	3539340
666	30.0	7.2	1.4	chr6	156440284	156440724	(14365255)	+	LTR16C	LTR/ERVL	1	537	(1)	3539448
56	27.3	1.7	5.8	chr6	156440762	156440997	(14364982)	+	GA-rich	Low_complexity	1	240	(0)	3539449
26506	5.1	0.2	0.0	chr6	156604705	156610838	(14195141)	+	L1PA4	LINE/L1	7	6152	(3)	3539710
180	25.7	9.8	5.1	chr6	156714978	156715055	(14090924)	C	LFSINE_Vert	SINE/tRNA	(16)	443	362	3539876
1374	14.8	1.8	1.4	chr6	156828063	156828285	(13977694)	C	AluJo	SINE/Alu	(13)	299	76	3540075
2297	11.7	0.0	0.0	chr6	156980201	156980508	(13825471)	+	AluSq2	SINE/Alu	1	308	(5)	3540264
260	27.0	0.0	1.3	chr6	156980509	156980574	(13825405)	C	L2b	LINE/L2	(14)	3361	3297	3540265
228	27.0	5.3	3.3	chr6	156980544	156980635	(13825344)	C	L2c	LINE/L2	(37)	3350	3257	3540266
762	15.6	4.9	3.6	chr6	157566106	157566245	(13239734)	C	LTR45B	LTR/ERV1	(0)	489	348	3541112
661	15.7	1.6	9.9	chr6	157566770	157566849	(13239130)	C	LTR45B	LTR/ERV1	(2)	498	430	3541113
194	26.4	0.0	1.9	chr6	157663888	157663941	(13142038)	C	MIRb	SINE/MIR	(107)	161	109	3541263
231	19.5	2.4	0.0	chr6	157663966	157664006	(13141973)	C	MIR	SINE/MIR	(217)	45	4	3541263
815	22.8	5.5	1.5	chr6	157664127	157664472	(13141507)	C	L1M4a1	LINE/L1	(1170)	2717	2499	3541264
1474	18.6	15.5	2.4	chr6	157841436	157841805	(12964174)	C	MER54A	LTR/ERVL	(474)	427	1	3541567
3736	11.4	7.4	3.5	chr6	158150736	158151269	(12654710)	+	Tigger3b	DNA/TcMar-Tigger	1	583	(648)	3542021
840	22.9	1.9	0.0	chr6	158151270	158151426	(12654553)	+	FAM	SINE/Alu	5	164	(21)	3542022
2287	10.2	0.7	0.0	chr6	158220515	158220809	(12585170)	+	AluSx	SINE/Alu	1	297	(15)	3542162
21	13.4	0.0	0.0	chr6	158221155	158221187	(12584792)	+	(A)n	Simple_repeat	1	33	(0)	3542163
22	15.8	4.0	0.0	chr6	158221188	158221203	(12584776)	+	A-rich	Low_complexity	2	52	(0)	3542164
381	15.6	4.9	2.2	chr6	158221208	158221345	(12584634)	C	Charlie1a	DNA/hAT-Charlie	(79)	1376	1235	3542165
4237	16.9	3.1	4.4	chr6	158551749	158552699	(12253280)	C	MER101-int	LTR/ERV1	(2924)	3715	2486	3542721
414	25.2	31.0	2.1	chr6	158734426	158734812	(12071167)	+	L2a	LINE/L2	2910	3423	(3)	3543040
496	25.6	13.8	5.6	chr6	158734822	158735053	(12070926)	C	MIRb	SINE/MIR	(2)	266	13	3543041
15	12.4	5.7	0.0	chr6	158869856	158869890	(11936089)	+	G-rich	Low_complexity	1	37	(0)	3543275
1771	14.5	10.7	0.0	chr6	160112680	160113023	(10692956)	+	MLT1B	LTR/ERVL-MaLR	1	385	(5)	3545083
1407	28.0	9.9	2.0	chr6	160113156	160113695	(10692284)	+	MER34A1	LTR/ERV1	1	587	(0)	3545084
200	27.5	17.3	2.1	chr6	164179739	164179831	(6626148)	+	MIRb	SINE/MIR	29	138	(130)	3550436
1476	18.6	4.9	2.0	chr6	164179854	164180195	(6625784)	+	MLT1A0	LTR/ERVL-MaLR	9	365	(0)	3550437
12	14.9	2.3	6.8	chr6	165662636	165662678	(5143301)	+	(GCCCGG)n	Simple_repeat	1	44	(0)	3552226
12	13.9	0.0	0.0	chr6	165663204	165663227	(5142752)	+	(GGC)n	Simple_repeat	1	24	(0)	3552227
300	34.6	1.0	0.0	chr6	166078069	166078169	(4727810)	C	L4_A_Mam	LINE/RTE-X	(844)	4146	4045	3552756
411	27.9	11.5	2.7	chr6	166078401	166078669	(4727310)	+	MLT1H2	LTR/ERVL-MaLR	247	536	(13)	3552757
12589	13.1	1.5	1.5	chr6	166094306	166096897	(4709082)	C	L1PA13	LINE/L1	(518)	5645	3117	3552786
2255	12.9	0.3	0.0	chr6	166400449	166400758	(4405221)	C	AluSx1	SINE/Alu	(1)	311	1	3553221
13	3.8	3.0	8.8	chr6	166492488	166492520	(4313459)	+	(CTTT)n	Simple_repeat	1	34	(0)	3553325
2176	8.9	0.6	4.9	chr6	166492706	166493031	(4312948)	C	AluSz	SINE/Alu	(0)	312	1	3553326
1254	18.8	6.0	2.7	chr6	166800401	166800739	(4005240)	+	MLT1A1	LTR/ERVL-MaLR	16	408	(0)	3553643
522	33.6	4.3	6.1	chr6	167097153	167097478	(3708501)	C	L3	LINE/CR1	(778)	3321	2998	3554026
2352	11.2	0.0	0.0	chr6	167097479	167097789	(3708190)	C	AluSq2	SINE/Alu	(2)	311	1	3554027
15194	12.4	3.9	1.1	chr6	167351639	167352743	(3453236)	+	Tigger1	DNA/TcMar-Tigger	1	1172	(1246)	3554314
71	21.6	3.8	6.0	chr7	121706	121750	(159224223)	+	G-rich	Low_complexity	50	299	(0)	3557982
683	34.5	9.6	7.9	chr7	122122	123030	(159222943)	+	L1M5	LINE/L1	2780	3705	(2441)	3557983
944	19.9	4.2	7.7	chr7	1040524	1040857	(158305116)	+	L1MD	LINE/L1	4958	5277	(869)	3559208
603	27.9	22.5	3.9	chr7	1136724	1137242	(158208731)	+	L2a	LINE/L2	2433	3076	(343)	3559350
430	27.5	12.8	3.2	chr7	1137252	1137469	(158208504)	+	L2a	LINE/L2	3185	3426	(0)	3559350
325	21.7	2.8	0.0	chr7	1558509	1558577	(157787396)	C	MIR3	SINE/MIR	(22)	186	116	3560078
443	36.8	4.1	0.0	chr7	2112308	2112614	(157233359)	+	L1MC4a	LINE/L1	6180	6499	(1383)	3560812
1497	32.0	5.9	8.6	chr7	2112680	2113297	(157232676)	+	L1MC4a	LINE/L1	6690	7239	(643)	3560812
1588	13.4	2.2	5.3	chr7	2559866	2560148	(156785825)	+	AluJr	SINE/Alu	1	274	(38)	3561639
802	15.0	0.0	0.0	chr7	2560149	2560261	(156785712)	+	AluJb	SINE/Alu	183	295	(17)	3561640
225	31.1	4.5	0.9	chr7	2560281	2560387	(156785586)	C	L2a	LINE/L2	(467)	2952	2842	3561638
1733	13.1	0.7	1.7	chr7	2843362	2843651	(156502322)	+	AluJr	SINE/Alu	1	287	(25)	3562096
1137	18.0	0.6	0.0	chr7	4479223	4479400	(154866573)	+	AluJb	SINE/Alu	1	179	(133)	3564913
663	26.8	3.7	2.1	chr7	4479401	4479640	(154866333)	+	LTR55	LTR/ERVL?	297	540	(8)	3564914
280	31.9	2.1	0.0	chr7	4479663	4479756	(154866217)	C	MIR3	SINE/MIR	(76)	132	37	3564915
13	26.3	1.2	8.1	chr7	5190335	5190419	(154155554)	+	(GGCCC)n	Simple_repeat	1	86	(0)	3566484
19	21.8	1.8	1.8	chr7	5190498	5190553	(154155420)	+	(GGTCGG)n	Simple_repeat	1	57	(0)	3566485
27	22.1	0.0	0.0	chr7	5525625	5525687	(153820286)	+	(ATGA)n	Simple_repeat	1	63	(0)	3567251
208	25.4	7.3	3.1	chr7	5525688	5525752	(153820221)	+	LFSINE_Vert	SINE/tRNA	251	318	(141)	3567252
339	32.7	2.6	0.0	chr7	5525715	5525827	(153820146)	+	L2c	LINE/L2	3272	3387	(0)	3567253
1011	15.2	3.0	1.2	chr7	5526205	5526368	(153819605)	+	AluJo	SINE/Alu	132	298	(14)	3567254
13	21.9	2.3	2.2	chr7	5556699	5556742	(153789231)	+	G-rich	Low_complexity	1	45	(0)	3567328
338	24.4	2.4	2.2	chr7	5557013	5557152	(153788821)	+	L1ME2	LINE/L1	5886	6023	(139)	3567329
240	33.3	2.6	0.0	chr7	5574717	5574830	(153771143)	C	Charlie16a	DNA/hAT-Charlie	(128)	214	98	3567381
17	27.5	1.3	4.0	chr7	5574861	5574935	(153771038)	+	G-rich	Low_complexity	1	76	(0)	3567382
1578	18.3	1.2	0.4	chr7	5575278	5575534	(153770439)	C	AluJb	SINE/Alu	(0)	312	54	3567383
2415	22.4	6.1	3.8	chr7	6219028	6219760	(153126213)	+	MLT1D-int	LTR/ERVL-MaLR	105	859	(512)	3568828
1173	15.9	4.0	0.8	chr7	6219763	6220003	(153125970)	+	L1MD2	LINE/L1	4982	5230	(1307)	3568825
320	26.5	0.0	9.7	chr7	6553849	6553961	(152792012)	+	MLT1K	LTR/ERVL-MaLR	437	538	(57)	3569655
1808	18.5	1.6	2.5	chr7	6553983	6554095	(152791878)	+	AluJo	SINE/Alu	1	114	(198)	3569656
1861	21.6	11.3	0.9	chr7	12220341	12220956	(147125017)	+	L1MC5a	LINE/L1	3	629	(2148)	3577124
364	27.9	0.8	2.3	chr7	13240680	13240811	(146105162)	+	MLT1N2	LTR/ERVL-MaLR	433	562	(0)	3578491
1344	23.1	4.0	7.0	chr7	14274557	14274942	(145071031)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3579822
14	14.1	7.7	0.0	chr7	16421279	16421317	(142924656)	+	(CCCGG)n	Simple_repeat	1	42	(0)	3582435
260	30.0	4.3	0.0	chr7	16740277	16740386	(142605587)	+	MLT1I	LTR/ERVL-MaLR	101	215	(196)	3582953
403	36.6	6.5	2.4	chr7	16740558	16740851	(142605122)	C	L2a	LINE/L2	(408)	3011	2705	3582943
16	16.4	4.9	0.0	chr7	19773364	19773371	(139572602)	+	(TTCCTC)n	Simple_repeat	1	21	(22)	3586877
13	16.5	0.0	0.0	chr7	19773372	19773398	(139572575)	+	(CCT)n	Simple_repeat	1	27	(0)	3586878
16	16.4	4.9	0.0	chr7	19773399	19773404	(139572569)	+	(TTCCTC)n	Simple_repeat	22	43	(0)	3586877
317	32.6	3.5	4.8	chr7	20678350	20678494	(138667479)	+	MIRc	SINE/MIR	14	156	(112)	3588086
227	24.5	0.0	0.0	chr7	21903370	21903422	(137442551)	C	MER45R	DNA/hAT-Tip100	(1528)	53	1	3589891
198	26.4	5.3	4.0	chr7	22082689	22082763	(137263210)	+	MER5A	DNA/hAT-Charlie	58	133	(56)	3590176
433	23.2	5.9	14.8	chr7	22452349	22452571	(136893402)	C	LTR50	LTR/ERVL	(593)	202	1	3590687
1304	27.2	4.6	4.3	chr7	24364337	24364449	(134981524)	C	L1MEg	LINE/L1	(4506)	1894	1785	3593751
2280	18.5	1.5	0.2	chr7	24364511	24364911	(134981062)	+	MER47B	DNA/TcMar-Tigger	12	417	(1)	3593753
1615	24.7	7.1	1.6	chr7	24365005	24365551	(134980422)	C	L1MEg	LINE/L1	(4599)	1816	1238	3593751
2429	7.8	0.7	1.0	chr7	24500276	24500584	(134845389)	C	AluY	SINE/Alu	(2)	309	2	3593972
553	27.5	11.0	0.9	chr7	24978319	24978538	(134367435)	C	L2a	LINE/L2	(0)	3426	3182	3594692
937	26.0	0.9	2.2	chr7	26280550	26280781	(133065192)	C	L1ME3G	LINE/L1	(363)	561	333	3596756
3066	13.6	3.3	0.6	chr7	26280782	26281248	(133064725)	+	MER66B	LTR/ERV1	1	480	(6)	3596761
429	21.5	1.1	1.1	chr7	26687138	26687231	(132658742)	C	MER133A	DNA?	(6)	100	7	3597401
376	23.7	1.0	2.0	chr7	26687144	26687242	(132658731)	+	MER133A	DNA?	7	104	(2)	3597402
23241	11.4	1.4	0.9	chr7	28334456	28341226	(131004747)	C	L1MA3	LINE/L1	(753)	6812	1	3599914
8518	11.7	1.1	1.1	chr7	29729409	29730721	(129615252)	C	L1M1	LINE/L1	(5154)	2411	1099	3602031
1431	27.2	10.0	2.2	chr7	29947275	29947681	(129398292)	+	LTR84a	LTR/ERVL	126	577	(180)	3602364
12	18.5	0.0	9.6	chr7	30028708	30028759	(129317214)	+	G-rich	Low_complexity	1	52	(0)	3602520
12	12.6	0.0	3.6	chr7	30028809	30028836	(129317137)	+	(GGCCG)n	Simple_repeat	1	28	(0)	3602521
1076	17.2	4.4	1.2	chr7	30634134	30634374	(128711599)	C	L1MB7	LINE/L1	(0)	6184	5936	3603414
2386	11.4	0.6	1.9	chr7	30750075	30750441	(128595532)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	3603606
1565	20.8	6.5	2.0	chr7	30750541	30750933	(128595040)	+	MLT2D	LTR/ERVL	1	412	(2)	3603607
1742	14.8	13.6	0.0	chr7	32180409	32180719	(127165254)	+	MLT1A1	LTR/ERVL-MaLR	49	408	(0)	3605774
1750	16.8	10.8	12.8	chr7	33108323	33108890	(126237083)	+	MER34C2	LTR/ERV1	1	555	(0)	3607375
12	18.9	7.1	0.0	chr7	33109133	33109174	(126236799)	+	(CCCGCGC)n	Simple_repeat	1	45	(0)	3607376
20	27.2	6.9	0.0	chr7	33109240	33109340	(126236633)	+	(GCTGCC)n	Simple_repeat	1	108	(0)	3607377
298	26.9	0.8	6.5	chr7	33128853	33128991	(126216982)	+	L1M5	LINE/L1	5623	5753	(490)	3607408
26613	2.2	0.1	0.0	chr7	33521748	33527773	(125818200)	C	L1PA2	LINE/L1	(2)	6153	125	3607982
21	26.0	3.5	2.2	chr7	33528001	33528086	(125817887)	+	(ATATA)n	Simple_repeat	1	89	(0)	3607983
1045	30.3	3.5	0.6	chr7	33868520	33868884	(125477089)	C	L2a	LINE/L2	(0)	3426	3051	3608523
377	28.5	13.5	3.2	chr7	33869130	33869314	(125476659)	C	MER103C	DNA/hAT-Charlie	(6)	291	85	3608524
294	35.3	5.3	7.2	chr7	34660738	34661085	(124684888)	+	L2c	LINE/L2	3047	3387	(0)	3609558
365	27.1	5.1	7.8	chr7	36151666	36151845	(123194128)	+	MLT1K	LTR/ERVL-MaLR	354	528	(67)	3611820
16	0.0	0.0	0.0	chr7	36151853	36151869	(123194104)	+	(T)n	Simple_repeat	1	17	(0)	3611821
237	33.3	4.5	3.7	chr7	36583336	36583444	(122762529)	+	Plat_L3	LINE/CR1	3463	3572	(14)	3612527
225	34.4	9.8	1.2	chr7	37565671	37565923	(121780050)	+	MLT1J	LTR/ERVL-MaLR	234	510	(2)	3613963
13189	17.4	2.4	3.1	chr7	38145912	38148986	(121196987)	+	L1M1	LINE/L1	15	3414	(4151)	3614712
2244	7.1	6.7	0.0	chr7	39520168	39520447	(119825526)	+	AluSg	SINE/Alu	1	300	(10)	3616633
282	20.8	3.5	1.5	chr7	40232420	40232504	(119113469)	+	Charlie4z	DNA/hAT-Charlie	90	153	(14)	3618067
1823	14.0	3.4	1.8	chr7	41118960	41119319	(118226654)	C	THE1C	LTR/ERVL-MaLR	(51)	377	1	3619388
8150	17.8	3.3	5.4	chr7	41397630	41399514	(117946459)	C	L1MC1	LINE/L1	(4661)	1847	4	3619784
2440	9.2	0.0	0.0	chr7	41399602	41399905	(117946068)	+	AluSc8	SINE/Alu	1	304	(7)	3619786
3323	13.4	5.6	2.3	chr7	41576084	41576311	(117769662)	C	L1PA15	LINE/L1	(343)	5822	5571	3620038
461	14.1	9.9	5.8	chr7	41576312	41576449	(117769524)	C	MIR	SINE/MIR	(111)	157	19	3620040
4139	18.9	3.3	1.0	chr7	42289566	42290760	(117055213)	C	L1MB8	LINE/L1	(29)	6149	4931	3621034
13	14.2	0.0	5.7	chr7	43869590	43869624	(115476349)	+	(GGCGG)n	Simple_repeat	1	35	(0)	3623322
544	12.0	13.8	1.0	chr7	44574470	44574570	(114771403)	+	MLT1D	LTR/ERVL-MaLR	390	505	(0)	3624434
1966	20.3	2.0	2.3	chr7	45118353	45118791	(114227182)	C	MER74A	LTR/ERVL	(0)	558	121	3625518
452	21.5	4.3	7.3	chr7	45444375	45444565	(113901408)	C	L1MC4	LINE/L1	(385)	7657	7473	3625955
1445	25.9	5.8	7.6	chr7	45444611	45445480	(113900493)	C	L1MC4	LINE/L1	(821)	7221	6441	3625955
332	20.9	15.1	1.5	chr7	45917823	45917953	(113428020)	+	MER5A	DNA/hAT-Charlie	9	160	(29)	3626605
5645	26.6	3.1	8.3	chr7	48210409	48211054	(111134919)	C	L1MA4	LINE/L1	(3085)	3061	2430	3629622
3185	25.1	3.4	2.8	chr7	48211064	48212401	(111133572)	C	L1M1	LINE/L1	(5379)	2186	155	3629624
1891	20.5	5.1	2.1	chr7	49980417	49980834	(109365139)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	2	3631824
311	36.1	6.2	8.0	chr7	50565836	50566097	(108779876)	+	HAL1ME	LINE/L1	99	355	(2110)	3632547
305	32.2	0.7	2.7	chr7	50566209	50566355	(108779618)	+	HAL1ME	LINE/L1	493	636	(1829)	3632547
333	26.4	6.5	0.8	chr7	50566373	50566502	(108779471)	C	L2b	LINE/L2	(251)	3124	2987	3632548
3064	15.5	3.9	2.0	chr7	50734832	50735435	(108610538)	+	L1M3	LINE/L1	4010	4625	(1515)	3632718
2049	15.1	3.3	7.3	chr7	50735440	50735898	(108610075)	+	HUERS-P1-int	LTR/ERV1	3624	4041	(2222)	3632719
280	30.5	7.2	2.9	chr7	55280562	55280671	(104065302)	+	L1ME4a	LINE/L1	5570	5690	(434)	3638401
1776	16.0	0.4	2.5	chr7	55280672	55280952	(104065021)	+	AluJb	SINE/Alu	38	312	(0)	3638402
43	0.0	0.0	0.0	chr7	55887601	55887639	(103458334)	+	(GCG)n	Simple_repeat	1	39	(0)	3639433
112	8.2	5.8	4.3	chr7	55887695	55887934	(103458039)	+	(GGC)n	Simple_repeat	1	254	(0)	3639434
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2965	13.3	1.4	0.4	chr7	64666677	64667158	(94678815)	C	MER57E3	LTR/ERV1	(0)	487	1	3646565
184	23.8	0.0	2.3	chr7	65624161	65624203	(93721770)	+	AmnSINE1	SINE/5S-Deu-L2	300	341	(234)	3648107
31	0.0	0.0	0.0	chr7	66246180	66246208	(93099765)	+	(T)n	Simple_repeat	1	29	(0)	3649610
1766	17.4	4.0	1.4	chr7	66246209	66246330	(93099643)	C	AluJr	SINE/Alu	(180)	132	1	3649609
340	28.3	13.4	4.8	chr7	66246677	66246906	(93099067)	C	MLT1J	LTR/ERVL-MaLR	(109)	403	151	3649611
600	26.4	6.7	6.0	chr7	67344528	67344809	(92001164)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	128	3651998
3871	8.9	3.2	2.8	chr7	67344815	67345377	(92000596)	+	MER61E	LTR/ERV1	1	565	(4)	3651999
2017	12.4	0.3	0.3	chr7	70591385	70591698	(88754275)	C	AluSz	SINE/Alu	(0)	312	1	3658533
2073	13.6	0.0	0.0	chr7	73530453	73530738	(85815235)	C	AluSz6	SINE/Alu	(26)	286	1	3664829
426	23.9	2.3	2.3	chr7	73530743	73530830	(85815143)	+	L1MC4	LINE/L1	7768	7855	(187)	3664825
1975	14.5	6.9	3.8	chr7	73530831	73531155	(85814818)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	85	3664830
2533	7.0	0.3	0.0	chr7	73531156	73531455	(85814518)	+	AluY	SINE/Alu	1	301	(10)	3664831
2269	8.4	2.9	0.3	chr7	74386042	74386339	(84959634)	C	AluSx1	SINE/Alu	(6)	306	1	3666944
2526	6.3	0.0	0.0	chr7	74386741	74387042	(84958931)	+	AluSx	SINE/Alu	1	302	(10)	3666945
398	24.1	8.1	0.0	chr7	77257844	77257945	(82088028)	+	MIRb	SINE/MIR	8	125	(143)	3673513
1028	26.8	7.3	7.5	chr7	77257950	77258358	(82087615)	C	LTR16A1	LTR/ERVL	(1)	455	51	3673514
1831	14.6	4.7	8.9	chr7	77258359	77258741	(82087232)	+	MER47A	DNA/TcMar-Tigger	1	366	(0)	3673515
766	25.5	9.3	11.8	chr7	77700586	77700874	(81645099)	C	L1MEd	LINE/L1	(310)	2197	1894	3674321
2191	10.5	2.0	0.7	chr7	77700875	77701170	(81644803)	+	AluSx3	SINE/Alu	1	300	(11)	3674322
19798	14.7	3.0	3.4	chr7	77853694	77856061	(81489912)	C	L1MA3	LINE/L1	(5258)	2307	22	3674590
296	30.3	15.1	0.5	chr7	78008159	78008344	(81337629)	+	MIRc	SINE/MIR	13	230	(38)	3674868
332	5.0	0.0	0.0	chr7	78055011	78055050	(81290923)	C	Alu	SINE/Alu	(244)	57	18	3674935
346	10.8	4.7	3.8	chr7	78055051	78055129	(81290844)	C	L1M3	LINE/L1	(699)	5484	5402	3674936
2045	15.3	18.0	0.7	chr7	78576364	78576816	(80769157)	+	MER39	LTR/ERV1	56	604	(103)	3675641
233	36.8	6.0	1.9	chr7	80485756	80485947	(78860026)	C	MIRc	SINE/MIR	(0)	262	64	3678270
2264	19.3	3.6	4.9	chr7	80709866	80710683	(78635290)	+	L1MB1	LINE/L1	4978	5787	(525)	3678539
1088	28.5	10.0	2.5	chr7	80770583	80771108	(78574865)	+	MLT1K	LTR/ERVL-MaLR	24	593	(2)	3678604
13021	16.8	2.0	1.4	chr7	81142998	81144437	(78201536)	+	L1M1	LINE/L1	772	2209	(5356)	3679158
1125	21.7	4.2	0.0	chr7	81964651	81964922	(77381051)	+	L1MA9	LINE/L1	5991	6274	(38)	3680233
10730	18.9	4.5	5.0	chr7	83118266	83120120	(76225853)	+	L1MA3	LINE/L1	5	2572	(4993)	3681845
16	0.0	0.0	0.0	chr7	83392484	83392501	(75953472)	+	(A)n	Simple_repeat	1	18	(0)	3682202
15885	9.0	1.2	0.4	chr7	91703284	91706429	(67639544)	+	L1PA10	LINE/L1	3311	6483	(0)	3692787
263	31.5	3.5	6.9	chr7	91939849	91940026	(67405947)	C	L2c	LINE/L2	(4)	3383	3180	3693105
227	28.7	12.2	4.7	chr7	91940108	91940213	(67405760)	C	MIRb	SINE/MIR	(141)	127	13	3693106
197	33.3	4.1	6.4	chr7	91940294	91940418	(67405555)	C	L2c	LINE/L2	(224)	3163	3042	3693105
16	8.7	0.0	0.0	chr7	91940884	91940908	(67405065)	+	(GGC)n	Simple_repeat	1	25	(0)	3693107
2229	10.1	0.0	3.9	chr7	92133259	92133566	(67212407)	C	AluSx	SINE/Alu	(16)	296	1	3693408
4552	21.9	3.8	4.2	chr7	95456523	95458551	(63887422)	C	L1MDa	LINE/L1	(3241)	3296	1298	3698000
197	28.1	6.6	1.7	chr7	95871384	95871441	(63474532)	C	L3b	LINE/CR1	(18)	5214	5154	3698588
2431	9.7	3.2	1.6	chr7	97800997	97801364	(61544609)	C	THE1C	LTR/ERVL-MaLR	(0)	375	2	3701300
1131	20.2	14.8	3.5	chr7	97801365	97801600	(61544373)	+	LTR52	LTR/ERVL	158	418	(3)	3701299
258	34.3	4.3	0.7	chr7	98463072	98463206	(60882767)	+	OldhAT1	DNA/hAT-Ac	1840	1979	(869)	3702658
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
2378	3.5	0.3	7.3	chr7	99598960	99599274	(59746699)	C	AluY	SINE/Alu	(18)	293	1	3705063
2930	20.9	3.2	5.2	chr7	99793409	99794144	(59551829)	C	L1MB5	LINE/L1	(32)	6142	5422	3705309
114	0.8	0.7	4.4	chr7	100131225	100131359	(59214614)	+	(TTTCT)n	Simple_repeat	1	136	(0)	3705918
207	25.7	9.8	1.3	chr7	100372152	100372226	(58973747)	+	MIR	SINE/MIR	111	192	(70)	3706454
302	32.6	9.3	2.0	chr7	101059237	101059386	(58286587)	+	MIR3	SINE/MIR	44	205	(3)	3707873
1890	19.7	0.0	0.0	chr7	101059630	101059938	(58286035)	C	AluJo	SINE/Alu	(3)	309	1	3707874
2302	10.6	0.3	0.0	chr7	101099733	101100033	(58245940)	+	AluSp	SINE/Alu	2	303	(10)	3707989
548	25.1	10.0	3.4	chr7	101101967	101102172	(58243801)	+	L2a	LINE/L2	3206	3426	(0)	3707992
240	22.2	8.8	17.2	chr7	101102247	101102309	(58243664)	C	MIR	SINE/MIR	(59)	203	141	3707993
2322	9.9	0.0	1.6	chr7	101102310	101102623	(58243350)	C	AluSz	SINE/Alu	(3)	309	1	3707994
13	21.7	0.0	2.6	chr7	101179592	101179630	(58166343)	+	(GGCAGA)n	Simple_repeat	1	39	(0)	3708165
16	10.3	0.0	5.6	chr7	101180045	101180080	(58165893)	+	(GCCGGA)n	Simple_repeat	1	36	(0)	3708166
184	13.3	2.2	6.2	chr7	101519993	101520040	(57825933)	+	MIR	SINE/MIR	108	153	(109)	3709035
1221	16.2	0.5	1.5	chr7	101520403	101520599	(57825374)	+	AluJr	SINE/Alu	1	195	(117)	3709036
17	19.3	2.4	0.0	chr7	101681465	101681506	(57664467)	+	(CACACA)n	Simple_repeat	1	43	(0)	3709400
19646	11.2	2.6	1.4	chr7	103186756	103193305	(56152668)	+	L1MA3	LINE/L1	1099	7724	(0)	3712343
590	28.0	10.4	2.8	chr7	103906224	103906436	(55439537)	+	MIR	SINE/MIR	28	258	(4)	3713321
2019	16.4	1.5	12.6	chr7	104118217	104118676	(55227297)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3713698
273	40.8	0.0	0.0	chr7	104884441	104884543	(54461430)	+	MER5A	DNA/hAT-Charlie	87	189	(0)	3714745
361	21.3	10.8	0.9	chr7	105138199	105138307	(54207666)	C	L2c	LINE/L2	(1)	3386	3266	3715198
300	29.3	1.8	9.4	chr7	105138454	105138516	(54207457)	+	L1MC5a	LINE/L1	2421	2483	(294)	3715199
284	34.3	11.4	2.2	chr7	105261886	105262156	(54083817)	C	L2	LINE/L2	(380)	3039	2741	3715419
2225	10.7	0.0	1.0	chr7	106102097	106102395	(53243578)	C	AluSx1	SINE/Alu	(16)	296	1	3717103
229	18.0	11.6	3.2	chr7	106589768	106589830	(52756143)	C	MER91B	DNA/hAT-Tip100	(119)	71	3	3717796
398	26.9	5.5	4.6	chr7	107077239	107077347	(52268626)	C	L2c	LINE/L2	(5)	3382	3273	3718566
1805	13.2	7.0	1.6	chr7	107384320	107384641	(51961332)	+	MER61A	LTR/ERV1	1	341	(0)	3719003
588	22.7	9.9	1.3	chr7	112423338	112423544	(46922429)	C	MIRb	SINE/MIR	(4)	264	16	3725776
7041	22.9	6.4	2.1	chr7	112897761	112900090	(46445883)	+	L1M1	LINE/L1	27	3146	(4419)	3726437
14	21.1	0.0	0.0	chr7	113085944	113085977	(46259996)	+	G-rich	Low_complexity	1	34	(0)	3726682
58	4.9	0.0	0.0	chr7	113086162	113086224	(46259749)	+	(AC)n	Simple_repeat	1	63	(0)	3726683
53	7.5	0.0	0.0	chr7	113086375	113086444	(46259529)	+	(T)n	Simple_repeat	1	70	(0)	3726684
16	18.4	3.8	3.6	chr7	114922984	114923049	(44422924)	+	(GCGGC)n	Simple_repeat	1	66	(0)	3729033
15	16.5	0.0	6.5	chr7	115663077	115663090	(43682883)	+	(TTATT)n	Simple_repeat	1	45	(0)	3730048
19	14.2	0.0	0.0	chr7	115663091	115663121	(43682852)	+	(T)n	Simple_repeat	1	31	(0)	3730049
42	4.7	0.0	0.0	chr7	116292297	116292341	(43053632)	+	(AG)n	Simple_repeat	1	45	(0)	3730849
22333	13.4	3.4	1.3	chr7	116292342	116294295	(43051678)	+	L1MA3	LINE/L1	1760	3782	(3783)	3730847
1923	19.7	3.9	0.5	chr7	116319446	116319837	(43026136)	+	MLT1A1	LTR/ERVL-MaLR	3	408	(0)	3730888
16	31.6	3.2	0.0	chr7	116319844	116319906	(43026067)	+	GA-rich	Low_complexity	1	65	(0)	3730889
250	27.9	1.4	0.0	chr7	116352487	116352554	(42993419)	+	MLT1M	LTR/ERVL-MaLR	588	656	(16)	3730926
182	28.9	1.9	0.0	chr7	116352756	116352807	(42993166)	C	L2	LINE/L2	(347)	3072	3020	3730927
11707	20.7	4.8	1.6	chr7	119196127	119201422	(40144551)	+	L1PA15-16	LINE/L1	3	4911	(1938)	3734874
3684	19.9	15.9	4.2	chr7	120791908	120792915	(38553058)	+	L1M4	LINE/L1	1	1148	(6369)	3736827
967	19.2	5.4	1.0	chr7	120805659	120805853	(38540120)	+	MER3	DNA/hAT-Charlie	6	209	(0)	3736846
14	12.5	0.0	0.0	chr7	120857964	120857989	(38487984)	+	(CCG)n	Simple_repeat	1	26	(0)	3736916
18	4.8	0.0	0.0	chr7	120857994	120858015	(38487958)	+	(A)n	Simple_repeat	1	22	(0)	3736917
313	25.2	5.4	0.8	chr7	121160002	121160104	(38185869)	C	L1MC4	LINE/L1	(0)	8042	7893	3737317
310	10.9	0.0	0.0	chr7	121160129	121160183	(38185790)	C	L1MA3	LINE/L1	(0)	6305	6251	3737318
25	13.3	0.0	5.4	chr7	121160203	121160258	(38185715)	+	(CATTA)n	Simple_repeat	1	56	(0)	3737319
29	16.1	0.0	0.0	chr7	121873273	121873328	(37472645)	+	(CTCTCT)n	Simple_repeat	1	56	(0)	3738330
30	3.4	0.0	0.0	chr7	121873329	121873358	(37472615)	+	(CA)n	Simple_repeat	1	30	(0)	3738331
1228	27.7	9.0	2.9	chr7	127486566	127486982	(31858991)	C	LTR16A1	LTR/ERVL	(0)	456	12	3745810
263	21.4	1.8	0.0	chr7	127486990	127487045	(31858928)	+	HAL1ME	LINE/L1	1601	1657	(808)	3745811
2194	9.4	2.3	0.7	chr7	127647841	127648139	(31697834)	C	AluSp	SINE/Alu	(9)	304	1	3746054
732	29.2	10.1	5.1	chr7	127648140	127648501	(31697472)	C	L2	LINE/L2	(996)	2423	2015	3746053
246	30.6	0.0	0.0	chr7	127648502	127648586	(31697387)	C	L2-3_Crp	LINE/L2	(1281)	815	731	3746055
1004	6.7	1.5	2.2	chr7	128455000	128455133	(30890840)	+	FLAM_C	SINE/Alu	1	133	(10)	3747271
12	22.1	0.0	0.0	chr7	129434515	129434546	(29911427)	+	(AACGGC)n	Simple_repeat	1	32	(0)	3749137
293	27.5	5.9	0.1	chr7	129434869	129434979	(29910994)	C	MIRb	SINE/MIR	(55)	207	89	3749138
814	16.5	15.4	0.6	chr7	129644505	129644681	(29701292)	C	MER3	DNA/hAT-Charlie	(0)	209	2	3749593
1058	21.4	9.2	4.8	chr7	131444597	131444718	(27901255)	C	AluJr	SINE/Alu	(52)	260	131	3752814
109	1.9	0.0	0.0	chr7	131444719	131444822	(27901151)	+	(AGT)n	Simple_repeat	1	104	(0)	3752815
1058	21.4	9.2	4.8	chr7	131444823	131444947	(27901026)	C	AluJr	SINE/Alu	(182)	130	1	3752814
1158	22.8	10.6	13.1	chr7	131444958	131445674	(27900299)	C	L1MC5a	LINE/L1	(1557)	1220	524	3752813
2122	8.6	0.0	2.4	chr7	131632671	131632987	(27712986)	C	AluSz	SINE/Alu	(0)	312	1	3753182
729	24.2	10.8	2.6	chr7	134594256	134594484	(24751489)	+	MLT1E1	LTR/ERVL-MaLR	5	254	(400)	3757718
16	0.0	4.3	0.0	chr7	134935238	134935260	(24410713)	+	(CAC)n	Simple_repeat	1	24	(0)	3758264
13	24.7	3.7	1.8	chr7	134935676	134935729	(24410244)	+	A-rich	Low_complexity	1	56	(0)	3758265
14	26.9	3.0	2.9	chr7	135211522	135211587	(24134386)	+	G-rich	Low_complexity	1	68	(0)	3758573
1567	18.1	7.7	0.6	chr7	135240840	135241151	(24104822)	C	MLT1A0	LTR/ERVL-MaLR	(29)	336	1	3758621
205	32.6	8.7	3.3	chr7	138379075	138379344	(20966629)	+	L2	LINE/L2	968	1253	(2166)	3763480
1777	17.2	1.5	1.8	chr7	138379553	138379883	(20966090)	C	MLT1A1	LTR/ERVL-MaLR	(5)	403	74	3763481
2045	11.9	3.6	0.0	chr7	138379884	138380178	(20965795)	+	AluSx1	SINE/Alu	1	306	(6)	3763482
1742	17.2	1.0	1.0	chr7	138886281	138886576	(20459397)	C	AluJr	SINE/Alu	(16)	296	1	3764499
14	17.3	5.1	0.0	chr7	139036105	139036143	(20309830)	+	(GCCTGG)n	Simple_repeat	1	41	(0)	3764778
1246	17.6	5.2	7.3	chr7	139036415	139036455	(20309518)	+	MER33	DNA/hAT-Charlie	17	51	(273)	3764779
1756	17.9	1.9	0.3	chr7	139036456	139036762	(20309211)	C	AluJo	SINE/Alu	(0)	312	1	3764780
2081	12.9	0.0	1.9	chr7	139380312	139380622	(19965351)	+	AluSx1	SINE/Alu	1	305	(7)	3765453
2066	9.7	0.7	3.5	chr7	139445830	139446140	(19899833)	C	AluSq2	SINE/Alu	(11)	302	1	3765619
863	23.5	4.5	6.4	chr7	139446177	139446336	(19899637)	C	MLT1D	LTR/ERVL-MaLR	(31)	474	322	3765620
1767	10.8	3.6	2.5	chr7	139446337	139446640	(19899333)	C	AluSz6	SINE/Alu	(0)	312	1	3765621
747	6.5	0.0	0.0	chr7	139490460	139490552	(19855421)	+	AluSq2	SINE/Alu	210	302	(11)	3765714
359	26.9	17.1	4.0	chr7	140239120	140239270	(19106703)	C	MIRb	SINE/MIR	(66)	202	28	3766964
507	24.6	8.6	10.5	chr7	140239292	140239577	(19106396)	+	LTR16	LTR/ERVL	86	365	(73)	3766965
410	21.1	0.3	0.0	chr7	140239698	140239809	(19106164)	C	LTR33A_	LTR/ERVL	(108)	423	299	3766966
27	0.0	6.1	0.0	chr7	140492877	140492909	(18853064)	+	(AAAT)n	Simple_repeat	1	35	(0)	3767589
12	25.3	2.4	0.0	chr7	140492916	140492957	(18853016)	+	(AATG)n	Simple_repeat	1	43	(0)	3767590
2273	8.1	0.7	0.7	chr7	140493347	140493643	(18852330)	+	AluSp	SINE/Alu	7	303	(10)	3767591
241	41.9	2.5	0.5	chr7	140932752	140932943	(18413030)	+	L2	LINE/L2	2070	2265	(1154)	3768449
1325	19.8	5.4	2.6	chr7	140932953	140933294	(18412679)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	14	3768450
438	33.0	6.6	1.9	chr7	141649580	141649805	(17696168)	+	MIRb	SINE/MIR	1	246	(22)	3769623
12740	14.9	2.4	2.0	chr7	141821824	141825281	(17520692)	C	L1PA7	LINE/L1	(0)	7573	964	3769862
620	25.4	9.7	4.8	chr7	144834627	144835065	(14510908)	+	LTR36	LTR/ERV1	88	611	(0)	3773749
371	28.8	12.0	2.9	chr7	144835294	144835497	(14510476)	C	MIRb	SINE/MIR	(23)	245	21	3773750
19770	13.6	3.5	1.2	chr7	147437455	147441807	(11904166)	C	L1M1	LINE/L1	(1245)	6314	1767	3777252
46	2.3	0.0	0.0	chr7	147441808	147441851	(11904122)	+	(TC)n	Simple_repeat	1	44	(0)	3777253
19770	16.4	3.6	2.4	chr7	147441852	147443630	(11902343)	C	L1M1	LINE/L1	(5799)	1766	9	3777252
480	31.8	7.4	2.0	chr7	148221188	148221431	(11124542)	C	MIR	SINE/MIR	(2)	260	3	3778427
329	20.3	5.5	1.4	chr7	148260482	148260551	(11085422)	C	MER90	LTR/ERV1	(8)	567	495	3778485
300	27.7	14.6	5.5	chr7	148260554	148260730	(11085243)	C	LTR41B	LTR/ERVL	(2)	756	564	3778486
1567	24.0	10.0	7.4	chr7	148260731	148261163	(11084810)	C	MER34	LTR/ERV1	(1)	541	90	3778487
22375	11.6	3.8	6.0	chr7	148674560	148677019	(10668954)	+	L1MA3	LINE/L1	17	2432	(5133)	3779212
1485	20.3	1.1	0.4	chr7	149144319	149144579	(10201394)	C	AluJb	SINE/Alu	(20)	292	30	3780146
2317	11.0	0.0	0.0	chr7	149144588	149144887	(10201086)	C	AluSq2	SINE/Alu	(12)	301	2	3780147
187	29.1	7.2	1.9	chr7	149690746	149690850	(9655123)	+	MER5A	DNA/hAT-Charlie	56	166	(23)	3781035
627	4.1	0.0	0.0	chr7	149691180	149691252	(9654721)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	3781036
226	24.4	9.5	2.3	chr7	149873136	149873223	(9472750)	C	MIRb	SINE/MIR	(44)	224	130	3781257
12	20.0	5.3	5.0	chr7	149873609	149873665	(9472308)	+	(CGGCG)n	Simple_repeat	1	60	(0)	3781258
205	21.7	18.8	6.1	chr7	150400529	150400675	(8945298)	C	MIRc	SINE/MIR	(40)	228	59	3782007
700	26.4	9.6	0.0	chr7	150420746	150421029	(8924944)	C	ORSL-2b	DNA/hAT-Tip100	(194)	314	1	3782040
184	19.4	0.0	0.0	chr7	150421349	150421384	(8924589)	+	L2a	LINE/L2	3391	3426	(0)	3782041
334	36.7	6.3	6.1	chr7	151231708	151232136	(8113837)	+	L2b	LINE/L2	2933	3362	(13)	3783085
29	10.1	3.6	1.8	chr7	151341712	151341766	(8004207)	+	(GCG)n	Simple_repeat	1	57	(0)	3783281
239	16.1	1.8	8.2	chr7	151441051	151441111	(7904862)	C	MIRc	SINE/MIR	(110)	158	102	3783436
1163	17.2	0.9	0.0	chr7	151441317	151441537	(7904436)	C	MER67C	LTR/ERV1	(0)	711	489	3783437
2527	5.7	0.0	0.0	chr7	151932941	151933240	(7412733)	+	AluSc	SINE/Alu	1	300	(9)	3784275
16087	13.5	3.7	0.5	chr7	152048750	152051180	(7294793)	C	L1MA3	LINE/L1	(5042)	2523	13	3784466
85	16.5	3.9	0.5	chr7	152674619	152674797	(6671176)	+	(TA)n	Simple_repeat	1	186	(0)	3785716
844	22.3	11.7	0.0	chr7	152674851	152675047	(6670926)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	3785717
943	12.9	1.4	0.7	chr7	152710727	152710865	(6635108)	+	AluJb	SINE/Alu	2	141	(171)	3785815
2259	9.7	1.6	0.0	chr7	152711058	152711355	(6634618)	C	AluSx1	SINE/Alu	(9)	303	1	3785816
252	12.5	0.0	2.0	chr7	152743478	152743526	(6602447)	+	Alu	SINE/Alu	253	300	(1)	3785906
1680	17.9	4.4	8.7	chr7	152743616	152743879	(6602094)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	155	3785907
2084	13.4	0.0	0.3	chr7	152743880	152744177	(6601796)	C	AluSz	SINE/Alu	(2)	310	14	3785908
571	13.9	5.7	3.4	chr7	152881364	152881482	(6464491)	+	L1P5	LINE/L1	5352	5473	(681)	3786133
1838	18.1	0.7	0.3	chr7	152881483	152881774	(6464199)	C	AluJb	SINE/Alu	(18)	294	2	3786134
7672	11.0	1.1	0.6	chr7	154462888	154463055	(4882918)	C	L1MA3	LINE/L1	(1785)	5780	5613	3788302
7428	14.5	3.2	1.5	chr7	154463055	154463190	(4882783)	C	L1MA3	LINE/L1	(6363)	1202	1074	3788302
2622	1.8	0.0	0.0	chr7	154463191	154463506	(4882467)	C	AluYg6	SINE/Alu	(0)	311	1	3788304
441	13.2	0.0	1.4	chr7	154792267	154792335	(4553638)	+	THE1B	LTR/ERVL-MaLR	128	195	(169)	3788748
308	22.4	19.3	0.0	chr7	154866048	154866181	(4479792)	C	L2b	LINE/L2	(196)	3179	3014	3788840
209	27.4	13.5	1.4	chr7	154867813	154867926	(4478047)	+	MIR	SINE/MIR	90	208	(54)	3788846
2643	7.1	0.0	0.0	chr7	155643152	155643448	(3702525)	C	AluSg	SINE/Alu	(13)	297	1	3789928
271	19.6	1.9	0.0	chr7	155723855	155723905	(3622068)	+	MER8	DNA/TcMar-Tigger	188	239	(0)	3790032
2021	11.6	0.3	0.7	chr7	155724275	155724558	(3621415)	+	AluSx1	SINE/Alu	29	311	(1)	3790033
272	10.5	0.0	8.1	chr7	155760673	155760734	(3585239)	C	L1MC5	LINE/L1	(0)	9304	9248	3790069
184	36.4	1.7	2.5	chr7	155862944	155863064	(3482909)	+	MIRb	SINE/MIR	127	246	(22)	3790180
271	30.8	1.5	2.2	chr7	157979120	157979210	(1366763)	+	L2b	LINE/L2	3303	3425	(1)	3792896
16	0.0	3.9	3.7	chr7	158151565	158151590	(1194383)	+	(GTG)n	Simple_repeat	1	27	(0)	3793030
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
2175	15.8	2.0	1.7	chr7	159283096	159283502	(62471)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3794282
2414	17.0	4.5	0.2	chr8	8275310	8275733	(136862903)	+	MSTB2	LTR/ERVL-MaLR	3	445	(12)	3804444
698	30.1	8.5	6.1	chr8	8275739	8276439	(136862197)	+	L1MEj	LINE/L1	1304	2022	(138)	3804443
19	0.0	0.0	0.0	chr8	8483487	8483507	(136655129)	+	(A)n	Simple_repeat	1	21	(0)	3804796
12	16.6	0.0	0.0	chr8	9338506	9338532	(135800104)	+	(TTCAT)n	Simple_repeat	1	27	(0)	3806330
232	29.4	6.1	0.0	chr8	10735644	10735735	(134402901)	+	MIRc	SINE/MIR	15	112	(156)	3808561
364	23.7	1.3	0.0	chr8	10956863	10956938	(134181698)	+	MER96	DNA/hAT-Tip100	99	175	(0)	3808826
1945	14.8	0.0	0.0	chr8	10956953	10957250	(134181386)	C	AluSx	SINE/Alu	(14)	298	1	3808827
1325	17.7	11.7	9.0	chr8	11807811	11808255	(133330381)	C	MER31B	LTR/ERV1	(0)	661	1	3810189
13	25.3	2.0	2.0	chr8	11808347	11808395	(133330241)	+	G-rich	Low_complexity	1	50	(0)	3810190
1449	12.0	1.1	15.3	chr8	13060020	13060353	(132078283)	+	AluJr	SINE/Alu	1	286	(26)	3812077
12	8.9	4.2	0.0	chr8	15540512	15540535	(129598101)	+	(CTG)n	Simple_repeat	1	25	(0)	3815553
7421	24.8	3.9	2.4	chr8	18128492	18130806	(127007830)	+	L1M1	LINE/L1	326	3354	(4211)	3819223
3362	16.2	2.8	0.3	chr8	19255713	19256390	(125882246)	+	L1MC1	LINE/L1	2670	3314	(3007)	3820914
3729	17.3	0.6	2.8	chr8	19256391	19256735	(125881901)	+	L1MC1	LINE/L1	5834	6171	(337)	3820914
1895	15.7	1.8	11.7	chr8	21557993	21558368	(123580268)	C	MER1B	DNA/hAT-Charlie	(0)	339	2	3824635
500	36.4	5.0	3.8	chr8	21558369	21558550	(123580086)	C	MIR	SINE/MIR	(70)	192	2	3824634
190	25.4	3.1	0.0	chr8	21558591	21558653	(123579983)	C	L2b	LINE/L2	(291)	3096	3032	3824633
193	20.6	2.2	0.3	chr8	22245671	22245722	(122892914)	C	L2a	LINE/L2	(8)	3418	3316	3825833
20	27.2	3.2	3.1	chr8	23074911	23075003	(122063633)	+	(CTCT)n	Simple_repeat	1	96	(0)	3827308
21	19.8	0.0	0.0	chr8	23074963	23075011	(122063625)	+	(CT)n	Simple_repeat	1	49	(0)	3827309
285	33.3	0.0	0.0	chr8	24892284	24892370	(120246266)	+	L2a	LINE/L2	3338	3424	(2)	3830135
4937	8.3	1.5	0.3	chr8	26209900	26210551	(118928085)	+	PABL_A	LTR/ERV1	1	660	(0)	3832305
305	31.3	17.6	4.0	chr8	26210650	26211158	(118927478)	+	L2	LINE/L2	1670	2256	(1163)	3832306
1405	18.9	4.7	0.8	chr8	28523141	28523434	(116615202)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	87	3836329
1576	18.1	4.7	2.4	chr8	28523435	28523722	(116614914)	C	AluJr4	SINE/Alu	(17)	295	1	3836330
496	27.2	11.4	1.0	chr8	28530211	28530407	(116608229)	+	MIR	SINE/MIR	6	225	(37)	3836339
683	7.9	0.0	0.0	chr8	28530411	28530499	(116608137)	+	5S	rRNA	1	89	(32)	3836340
183	19.4	5.3	0.0	chr8	28530504	28530539	(116608097)	+	MIR	SINE/MIR	219	256	(6)	3836339
683	26.7	9.8	0.3	chr8	28530624	28530920	(116607716)	C	L1ME3Cz	LINE/L1	(102)	895	568	3836341
48	0.0	0.0	0.0	chr8	29601124	29601166	(115537470)	+	(ATA)n	Simple_repeat	1	43	(0)	3838188
2887	18.1	2.3	0.4	chr8	30029893	30030412	(115108224)	+	L1MB5	LINE/L1	6028	6557	(115)	3838889
854	19.8	7.1	1.2	chr8	30030459	30030630	(115108006)	+	AluJb	SINE/Alu	130	312	(0)	3838896
132	14.5	4.8	1.9	chr8	30030634	30030683	(115107953)	+	A-rich	Low_complexity	1	56	(304)	3838897
18	12.6	2.8	0.0	chr8	30030684	30030719	(115107917)	+	G-rich	Low_complexity	1	37	(0)	3838898
132	14.5	4.8	1.9	chr8	30030720	30030984	(115107652)	+	A-rich	Low_complexity	57	360	(0)	3838897
1024	15.0	13.8	6.5	chr8	30155847	30155989	(114982647)	C	AluJr	SINE/Alu	(14)	298	137	3839159
31	0.0	0.0	0.0	chr8	30155990	30156018	(114982618)	+	(T)n	Simple_repeat	1	29	(0)	3839160
1024	15.0	13.8	6.5	chr8	30156019	30156121	(114982515)	C	AluJr	SINE/Alu	(177)	135	31	3839159
14	11.6	0.0	3.3	chr8	30156267	30156296	(114982340)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3839161
529	36.2	13.7	1.1	chr8	30647876	30648472	(114490164)	C	L2b	LINE/L2	(0)	3375	2680	3840103
892	29.2	4.2	4.9	chr8	30648475	30648881	(114489755)	+	MLT1I	LTR/ERVL-MaLR	3	406	(5)	3840104
530	32.9	9.3	0.0	chr8	37388888	37389121	(107749515)	+	MIR	SINE/MIR	4	261	(1)	3850239
1890	11.9	4.5	0.0	chr8	37735980	37736256	(107402380)	+	AluJr	SINE/Alu	1	290	(22)	3850886
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
22	8.6	2.6	0.0	chr8	37916540	37916577	(107222059)	+	(CTTTT)n	Simple_repeat	1	39	(0)	3851210
2163	9.5	6.1	0.3	chr8	37916579	37916872	(107221764)	C	AluSx	SINE/Alu	(0)	312	1	3851211
1732	17.6	3.2	3.2	chr8	39307126	39307529	(105831107)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	3	3853713
1887	12.0	0.0	0.8	chr8	41572662	41572927	(103565709)	C	AluSq2	SINE/Alu	(48)	265	2	3857260
20	17.7	4.3	4.2	chr8	47659595	47659663	(97478973)	+	(GCCCCC)n	Simple_repeat	1	72	(0)	3862216
222	28.7	4.4	2.2	chr8	48509893	48509981	(96628655)	C	L2c	LINE/L2	(33)	3354	3264	3863405
20	11.8	2.6	0.0	chr8	48592729	48592766	(96545870)	+	(CTTAAG)n	Simple_repeat	1	39	(0)	3863487
769	28.8	7.3	0.3	chr8	48592926	48593245	(96545391)	C	L2a	LINE/L2	(735)	2684	2341	3863485
16817	15.1	1.2	2.0	chr8	53212064	53215611	(91923025)	C	L1PREC2	LINE/L1	(3237)	3529	13	3869220
18691	12.2	2.5	2.5	chr8	53348448	53352761	(91785875)	C	PABL_A-int	LTR/ERV1	(0)	5015	4	3869385
374	32.7	7.2	6.4	chr8	54014761	54014979	(91123657)	+	MIR	SINE/MIR	15	235	(27)	3870319
24	0.0	0.0	0.0	chr8	54443274	54443299	(90695337)	+	(A)n	Simple_repeat	1	26	(0)	3871095
743	23.0	9.5	1.6	chr8	54443321	54443572	(90695064)	+	MER5C	DNA/hAT-Charlie	40	313	(0)	3871096
1142	29.2	7.1	1.6	chr8	56681640	56682130	(88456506)	C	LTR101_Mam	LTR/ERVL	(287)	542	23	3874285
9899	14.6	1.7	1.5	chr8	57003425	57003499	(88135137)	C	L1PA16	LINE/L1	(1154)	5117	5037	3874718
3493	8.2	2.5	5.5	chr8	57003500	57004027	(88134609)	+	MER9a3	LTR/ERVK	1	512	(0)	3874720
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
3578	1.2	0.2	0.0	chr8	57420194	57420605	(87718031)	+	L1PA2	LINE/L1	5743	6155	(0)	3875285
1646	28.6	8.2	5.9	chr8	57420606	57421066	(87717570)	C	LTR43-int	LTR/ERV1	(4331)	467	1	3875284
3494	14.5	1.8	1.7	chr8	57421067	57421663	(87716973)	C	LTR43	LTR/ERV1	(0)	602	5	3875284
15	13.9	0.0	0.0	chr8	59119453	59119476	(86019160)	+	(G)n	Simple_repeat	1	24	(0)	3877492
14	9.5	8.8	0.0	chr8	59119598	59119631	(86019005)	+	GA-rich	Low_complexity	1	37	(0)	3877493
263	32.4	8.7	3.6	chr8	60315383	60315577	(84823059)	C	L3	LINE/CR1	(603)	3496	3291	3878953
2744	18.4	5.5	0.2	chr8	60315822	60316317	(84822319)	+	LTR45	LTR/ERV1	2	525	(0)	3878956
1594	23.9	3.1	1.1	chr8	60429129	60429504	(84709132)	+	MER88	LTR/ERVL	1	384	(80)	3879133
960	27.1	2.7	7.4	chr8	60429564	60429684	(84708952)	+	L2a	LINE/L2	2711	2819	(600)	3879132
2194	11.4	0.3	0.0	chr8	60429685	60429973	(84708663)	+	AluSz	SINE/Alu	1	290	(22)	3879134
479	30.4	4.2	1.2	chr8	61725397	61725556	(83413080)	C	MIR3	SINE/MIR	(5)	203	39	3881012
634	25.1	3.0	6.3	chr8	61725561	61725647	(83412989)	+	MER106A	DNA/hAT-Charlie	3	94	(142)	3881013
1698	18.6	9.3	1.9	chr8	61725648	61725942	(83412694)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	80	3881014
2188	9.7	0.4	0.4	chr8	61725943	61726252	(83412384)	C	AluSc5	SINE/Alu	(0)	309	1	3881015
232	26.4	10.4	0.8	chr8	65387200	65387321	(79751315)	C	L5	LINE/RTE-X	(736)	1529	1395	3885698
2988	0.3	0.0	0.0	chr8	65765209	65765518	(79373118)	+	AluYa5	SINE/Alu	2	311	(0)	3886368
916	27.6	14.5	1.6	chr8	65947297	65947832	(79190804)	+	LTR16D	LTR/ERVL	1	648	(3)	3886646
432	33.6	0.7	0.7	chr8	65948146	65948289	(79190347)	+	MLT1K	LTR/ERVL-MaLR	156	299	(296)	3886647
2276	11.9	3.0	1.9	chr8	67243240	67243599	(77895037)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3888952
11833	16.5	5.6	5.4	chr8	67243600	67243957	(77894679)	+	L1M1	LINE/L1	1966	2327	(5238)	3888951
381	28.4	9.4	0.4	chr8	69536880	69537116	(75601520)	+	MIR	SINE/MIR	1	262	(6)	3892168
1276	14.2	4.2	9.3	chr8	69994522	69994688	(75143948)	C	MER45R	DNA/hAT-Tip100	(889)	692	521	3893025
700	24.4	3.9	4.3	chr8	69994842	69995026	(75143610)	C	MER45R	DNA/hAT-Tip100	(1308)	273	89	3893025
232	31.8	10.7	3.2	chr8	70162031	70162186	(74976450)	+	MIRb	SINE/MIR	100	268	(0)	3893382
213	32.9	2.6	0.0	chr8	70162190	70162265	(74976371)	+	MIR3	SINE/MIR	43	120	(88)	3893383
12521	19.2	1.9	1.5	chr8	70890205	70895437	(74243199)	C	L1MA5	LINE/L1	(1892)	5670	399	3894476
253	33.1	4.1	1.8	chr8	71997843	71997970	(73140666)	C	MER5B	DNA/hAT-Charlie	(0)	189	55	3895929
1850	15.7	11.0	0.0	chr8	71998012	71998374	(73140262)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3895930
21617	10.9	1.3	0.9	chr8	72404814	72411318	(72727318)	+	L1PA10	LINE/L1	10	6465	(18)	3896407
1126	26.1	11.5	2.3	chr8	73600068	73600373	(71538263)	C	Charlie25	DNA/hAT-Charlie	(2094)	430	69	3898190
23	15.3	0.0	0.0	chr8	75305579	75305616	(69833020)	+	A-rich	Low_complexity	1	38	(0)	3900779
285	27.9	4.2	0.0	chr8	75305748	75305815	(69832821)	+	UCON25	Unknown	91	161	(114)	3900780
1368	25.2	16.1	2.4	chr8	75313342	75314023	(69824613)	C	LTR50	LTR/ERVL	(0)	795	2	3900791
455	32.8	2.5	3.9	chr8	75811091	75811293	(69327343)	C	LFSINE_Vert	SINE/tRNA	(259)	200	1	3901495
277	37.5	5.5	0.0	chr8	76531722	76531825	(68606811)	+	MIRb	SINE/MIR	6	115	(153)	3902350
184	33.0	2.8	7.0	chr8	76531859	76531972	(68606664)	C	L2c	LINE/L2	(0)	3387	3279	3902351
866	25.9	10.5	1.8	chr8	76618406	76618736	(68519900)	+	Charlie29a	DNA/hAT-Charlie	18	380	(339)	3902479
280	28.2	4.3	4.2	chr8	76619149	76619243	(68519393)	C	L2c	LINE/L2	(70)	3356	3239	3902480
209	24.6	3.4	0.0	chr8	80029511	80029567	(65109069)	C	MIR	SINE/MIR	(123)	139	81	3906894
2218	22.8	5.6	1.3	chr8	80737140	80737672	(64400964)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	9	3908306
2632	18.5	6.0	3.2	chr8	80737715	80738345	(64400291)	C	L1MD3	LINE/L1	(33)	7962	7313	3908307
2636	8.8	0.3	0.0	chr8	85248176	85248483	(59890153)	+	AluSp	SINE/Alu	1	309	(4)	3914281
505	20.0	0.0	0.0	chr8	85248488	85248562	(59890074)	+	FLAM_A	SINE/Alu	10	84	(58)	3914282
12	15.6	3.5	0.0	chr8	85248581	85248609	(59890027)	+	GA-rich	Low_complexity	1	30	(0)	3914283
21	4.2	0.0	0.0	chr8	85973678	85973702	(59164934)	+	(T)n	Simple_repeat	1	25	(0)	3915283
33	0.0	0.0	5.0	chr8	85973723	85973762	(59164874)	+	(ATTTT)n	Simple_repeat	1	40	(0)	3915284
2232	14.1	10.5	0.5	chr8	87831666	87832050	(57306586)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3917826
1357	28.2	10.2	4.9	chr8	87832051	87832451	(57306185)	C	LTR41B	LTR/ERVL	(264)	494	61	3917824
1979	21.1	5.1	4.5	chr8	87832452	87832959	(57305677)	+	MER67D	LTR/ERV1	1	490	(24)	3917827
1431	31.2	10.5	3.0	chr8	88052023	88053088	(57085548)	+	L2c	LINE/L2	2244	3386	(1)	3918120
12763	18.8	1.3	1.4	chr8	88437062	88439409	(56699227)	+	L1M1	LINE/L1	12	2356	(5209)	3918634
1571	22.5	2.5	2.7	chr8	89094003	89094367	(56044269)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	2	3919397
2202	19.8	4.4	2.3	chr8	93753916	93754432	(51384204)	C	LTR64	LTR/ERV1	(0)	528	1	3925740
335	13.4	0.0	11.8	chr8	93754619	93754694	(51383942)	+	Tigger5b	DNA/TcMar-Tigger	401	467	(5)	3925741
282	33.0	1.8	5.9	chr8	96235753	96235871	(48902765)	+	MIRb	SINE/MIR	13	126	(142)	3929960
463	27.8	6.5	5.5	chr8	96235847	96235915	(48902721)	C	MIRb	SINE/MIR	(9)	253	177	3929961
3053	14.3	5.7	2.9	chr8	96235916	96236475	(48902161)	+	MER34D	LTR/ERV1	1	577	(2)	3929962
605	27.9	3.8	1.9	chr8	97305342	97305546	(47833090)	C	MIR	SINE/MIR	(26)	236	28	3931532
1816	16.2	10.1	0.6	chr8	97305671	97306000	(47832636)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3931533
2062	13.2	0.0	2.2	chr8	97748577	97748893	(47389743)	+	AluJb	SINE/Alu	3	312	(0)	3932335
1452	16.6	9.3	14.2	chr8	97748894	97749301	(47389335)	C	MSTB1	LTR/ERVL-MaLR	(63)	402	17	3932336
15	11.7	0.0	0.0	chr8	97916932	97916959	(47221677)	+	(TTTCC)n	Simple_repeat	1	28	(0)	3932729
18793	11.4	2.7	1.0	chr8	98225529	98226584	(46912052)	C	L1M1	LINE/L1	(4747)	2818	1769	3933360
35	5.4	0.0	0.0	chr8	98226585	98226623	(46912013)	+	(TC)n	Simple_repeat	1	39	(0)	3933361
25786	5.4	0.4	0.2	chr8	98710157	98716294	(46422342)	+	L1PA4	LINE/L1	2	6152	(3)	3934057
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
3828	21.4	1.8	5.4	chr8	99029842	99030247	(46108389)	C	L1MA5	LINE/L1	(4455)	3111	2748	3934610
3470	19.0	8.0	5.5	chr8	99030248	99030461	(46108175)	+	MER6	DNA/TcMar-Tigger	1	240	(625)	3934617
35	0.0	0.0	0.0	chr8	99030462	99030491	(46108145)	+	(GT)n	Simple_repeat	1	30	(0)	3934618
3470	19.0	8.0	5.5	chr8	99030492	99031118	(46107518)	+	MER6	DNA/TcMar-Tigger	241	864	(1)	3934617
10275	17.3	2.8	1.1	chr8	99070745	99072587	(46066049)	C	L1M1	LINE/L1	(5075)	2490	615	3934672
11376	9.9	3.2	0.1	chr8	100545605	100547185	(44591451)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3936978
516	27.4	10.4	9.3	chr8	100589319	100589749	(44548887)	C	L2c	LINE/L2	(41)	3346	2911	3937044
310	33.7	1.0	0.0	chr8	100589756	100589853	(44548783)	+	MLT1K	LTR/ERVL-MaLR	2	100	(495)	3937046
498	25.6	11.3	3.0	chr8	101116799	101117032	(44021604)	+	MIRc	SINE/MIR	13	268	(0)	3938171
555	28.4	8.7	3.5	chr8	102158407	102158603	(42980033)	+	L2a	LINE/L2	3205	3412	(14)	3939877
605	34.3	7.5	0.4	chr8	102159131	102159364	(42979272)	C	MIRc	SINE/MIR	(6)	262	11	3939878
432	33.3	10.3	4.9	chr8	102592325	102592589	(42546047)	+	L2c	LINE/L2	3084	3364	(23)	3940699
1498	28.6	3.1	7.8	chr8	103208516	103209056	(41929580)	+	MER45C	DNA/hAT-Tip100	1	515	(438)	3941928
231	22.6	17.9	13.5	chr8	103209053	103209089	(41929547)	C	Charlie17a	DNA/hAT-Charlie	(20)	197	171	3941929
2039	14.8	0.0	0.0	chr8	103209090	103209379	(41929257)	+	AluSz	SINE/Alu	1	290	(22)	3941930
11995	21.6	7.0	5.8	chr8	103703535	103708610	(41430026)	C	L1MA4	LINE/L1	(1534)	6028	7	3942655
21063	10.5	1.5	2.0	chr8	105258284	105260622	(39878014)	C	L1PA11	LINE/L1	(498)	7111	4799	3944908
3253	14.7	4.2	2.7	chr8	106059649	106060242	(39078394)	+	LTR26	LTR/ERV1	1	603	(0)	3945969
15	25.1	5.6	0.0	chr8	106060244	106060297	(39078339)	+	GA-rich	Low_complexity	1	57	(0)	3945970
12	20.1	0.0	2.8	chr8	106878152	106878187	(38260449)	+	(TGTATT)n	Simple_repeat	1	36	(0)	3947215
1145	27.3	5.0	12.5	chr8	111252875	111253464	(33885172)	C	LTR41	LTR/ERVL	(225)	543	1	3953269
345	36.3	1.0	5.2	chr8	115435334	115435545	(29703091)	+	MamRep38	DNA/hAT	1	203	(92)	3958701
423	31.5	6.7	0.8	chr8	115435598	115435837	(29702799)	C	MARNA	DNA/TcMar-Mariner	(320)	266	12	3958702
709	24.0	3.4	1.7	chr8	117927718	117927891	(27210745)	+	MER45A	DNA/hAT-Tip100	2	178	(0)	3962381
15	0.0	5.3	0.0	chr8	118074557	118074575	(27064061)	+	(GA)n	Simple_repeat	1	20	(0)	3962662
20	19.2	0.0	2.0	chr8	118743997	118744045	(26394591)	+	A-rich	Low_complexity	1	49	(0)	3963794
259	28.3	0.0	1.6	chr8	118921751	118921811	(26216825)	+	MLT1O	LTR/ERVL-MaLR	151	210	(332)	3964062
208	29.2	15.4	4.5	chr8	119496957	119497157	(25641479)	C	MIR	SINE/MIR	(8)	254	28	3964900
258	32.0	7.8	6.3	chr8	119497109	119497298	(25641338)	+	MIRb	SINE/MIR	23	215	(53)	3964901
185	31.7	11.5	8.2	chr8	119920418	119920685	(25217951)	C	L2c	LINE/L2	(191)	3196	2919	3965651
2176	11.4	0.0	0.0	chr8	120009332	120009612	(25129024)	+	AluSz	SINE/Alu	2	282	(30)	3965869
15745	13.5	4.9	2.2	chr8	124083359	124089521	(21049115)	C	L1MA3	LINE/L1	(1127)	6438	72	3973072
1992	24.2	10.5	4.2	chr8	124353296	124354424	(20784212)	+	L1MC4	LINE/L1	6468	7845	(197)	3973547
1463	30.4	0.8	0.5	chr8	124354460	124354849	(20783787)	+	LTR16A	LTR/ERVL	59	449	(2)	3973548
2382	7.2	1.6	0.0	chr8	124440122	124440428	(20698208)	C	AluSp	SINE/Alu	(1)	312	1	3973723
12	17.1	2.9	2.8	chr8	124440629	124440663	(20697973)	+	(CTTT)n	Simple_repeat	1	36	(0)	3973724
2615	14.2	3.2	2.6	chr8	124440668	124441129	(20697507)	+	MER4C	LTR/ERV1	1	465	(0)	3973725
18	23.0	0.0	5.9	chr8	124475020	124475087	(20663549)	+	(CCCGCC)n	Simple_repeat	1	68	(0)	3973783
15	19.9	2.5	0.0	chr8	124475055	124475094	(20663542)	+	(GCCCT)n	Simple_repeat	1	41	(0)	3973784
591	10.8	0.0	0.0	chr8	124674130	124674212	(20464424)	C	AluSx	SINE/Alu	(11)	301	219	3974110
586	18.5	0.0	0.0	chr8	124674226	124674333	(20464303)	+	L1MB5	LINE/L1	6067	6174	(0)	3974111
1950	14.2	1.8	0.0	chr8	127833462	127833736	(17304900)	C	AluJb	SINE/Alu	(15)	297	18	3980208
536	23.8	11.6	0.0	chr8	127833855	127834014	(17304622)	C	MER5A	DNA/hAT-Charlie	(0)	189	9	3980209
635	26.0	1.6	8.3	chr8	129484627	129484953	(15653683)	C	L1ME1	LINE/L1	(80)	6099	5795	3983241
231	36.3	1.1	0.0	chr8	130408065	130408155	(14730481)	+	L2c	LINE/L2	3114	3205	(182)	3984961
2789	14.7	5.4	4.4	chr8	130408180	130408679	(14729957)	+	MLT2B1	LTR/ERVL	5	510	(10)	3984962
13	7.2	6.5	3.0	chr8	130528374	130528404	(14610232)	+	(CCCAC)n	Simple_repeat	1	33	(0)	3985268
513	36.8	4.0	3.6	chr8	131803826	131804076	(13334560)	+	MIRb	SINE/MIR	9	260	(8)	3987452
15	10.3	0.0	5.7	chr8	131804125	131804163	(13334473)	+	G-rich	Low_complexity	1	36	(0)	3987453
259	25.3	2.5	2.5	chr8	131804171	131804251	(13334385)	+	MIRb	SINE/MIR	178	258	(10)	3987454
29	16.0	4.9	3.5	chr8	132775354	132775435	(12363201)	+	(GGC)n	Simple_repeat	1	86	(0)	3989225
12	11.1	4.3	8.3	chr8	132775498	132775543	(12363093)	+	(CGCTC)n	Simple_repeat	1	48	(0)	3989226
184	31.4	3.7	1.9	chr8	134581412	134581518	(10557118)	C	MIR3	SINE/MIR	(3)	205	97	3992528
1725	15.7	0.4	1.8	chr8	134581610	134581889	(10556747)	C	AluJb	SINE/Alu	(36)	276	1	3992529
288	28.4	6.7	4.8	chr8	135539068	135539270	(9599366)	C	MER20B	DNA/hAT-Charlie	(0)	219	5	3994189
236	33.5	9.4	1.3	chr8	140158774	140158930	(4979706)	C	MIRb	SINE/MIR	(3)	265	95	4001457
209	27.3	6.9	7.6	chr8	140158941	140159071	(4979565)	C	L2a	LINE/L2	(0)	3426	3246	4001458
455	32.8	0.0	0.0	chr8	140159267	140159394	(4979242)	+	L2a	LINE/L2	3297	3424	(2)	4001459
242	26.7	12.7	1.8	chr8	142103131	142103298	(3035338)	C	L2c	LINE/L2	(224)	3163	2972	4004528
1830	21.2	16.5	3.8	chr8	142905294	142906165	(2232471)	+	HERVL74-int	LTR/ERVL	2297	3282	(2403)	4005436
1648	24.9	4.8	3.0	chr8	143174760	143175251	(1963385)	C	LTR43-int	LTR/ERV1	(203)	4595	4095	4005857
329	27.7	1.1	0.0	chr8	143175248	143175341	(1963295)	C	LTR43-int	LTR/ERV1	(1371)	3427	3333	4005857
3275	16.2	7.9	1.6	chr8	143175348	143175435	(1963201)	C	LTR71B	LTR/ERV1	(0)	610	531	4005858
2564	4.0	0.7	0.0	chr8	143175436	143175731	(1962905)	+	AluY	SINE/Alu	1	298	(13)	4005859
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1855	14.0	0.3	2.3	chr8	143760400	143760699	(1377937)	+	AluJb	SINE/Alu	7	300	(12)	4006625
326	4.0	0.0	0.0	chr8	144037048	144037112	(1101524)	C	SVA_F	Retroposon/SVA	(537)	838	737	4007006
5367	3.1	1.5	2.1	chr8	144037108	144037833	(1100803)	+	SVA_D	Retroposon/SVA	665	1386	(0)	4007007
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
293	19.1	0.0	0.0	chr8	144126225	144126287	(1012349)	+	L1MC4	LINE/L1	7955	8017	(25)	4007142
953	15.2	1.8	2.4	chr8	144126289	144126452	(1012184)	C	AluJb	SINE/Alu	(20)	292	130	4007146
1266	11.1	0.0	1.7	chr8	144126887	144127066	(1011570)	+	AluSx3	SINE/Alu	121	297	(14)	4007147
4623	9.6	1.3	0.0	chr8	144691402	144692003	(446633)	C	LTR71B	LTR/ERV1	(0)	610	1	4007929
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
411	15.9	5.8	2.3	chr8	144853539	144853640	(284996)	C	LTR54	LTR/ERV1	(391)	107	1	4008204
399	8.9	8.1	0.0	chr8	144853665	144853743	(284893)	+	L1MB8	LINE/L1	6093	6178	(0)	4008205
7746	18.2	1.7	3.5	chr8	145026350	145027823	(110813)	C	HERVK-int	LTR/ERVK	(6090)	1446	1	4008436
16	23.2	1.9	1.9	chr9	976573	976624	(137418093)	+	G-rich	Low_complexity	1	53	(0)	4010079
13	23.1	3.7	3.6	chr9	2015450	2015503	(136379214)	+	(GCC)n	Simple_repeat	1	56	(0)	4011561
216	21.1	10.3	0.0	chr9	3028727	3028778	(135365939)	C	L2a	LINE/L2	(15)	3411	3354	4013031
30	0.0	3.5	0.0	chr9	3028838	3028866	(135365851)	+	(GA)n	Simple_repeat	1	30	(0)	4013032
17147	15.8	1.1	4.2	chr9	4196802	4201854	(134192863)	+	L1PA16	LINE/L1	633	5360	(1489)	4014650
39	4.6	0.0	0.0	chr9	4537569	4537613	(133857104)	+	(AAAAT)n	Simple_repeat	1	45	(0)	4015214
1610	16.0	4.5	1.2	chr9	4537615	4537937	(133856780)	+	L1MB7	LINE/L1	5835	6168	(16)	4015215
28157	2.6	0.3	0.0	chr9	4605800	4611811	(133782906)	+	L1PA3	LINE/L1	125	6155	(0)	4015329
1636	15.8	2.7	0.3	chr9	5116983	5117267	(133277450)	+	MLT1A1	LTR/ERVL-MaLR	110	401	(7)	4016141
237	30.1	5.7	0.0	chr9	5117314	5117396	(133277321)	C	L2a	LINE/L2	(548)	2871	2784	4016140
1555	16.8	20.1	0.2	chr9	5117404	5117822	(133276895)	+	Charlie1b	DNA/hAT-Charlie	1	523	(0)	4016142
2261	22.1	2.1	0.0	chr9	8221915	8222381	(130172336)	+	LTR53	LTR/ERVL	1	477	(42)	4020815
189	37.9	7.6	7.6	chr9	9790096	9790292	(128604425)	+	MIRc	SINE/MIR	37	233	(35)	4022887
831	21.0	2.9	5.0	chr9	10202784	10203014	(128191703)	+	MLT1A0	LTR/ERVL-MaLR	144	387	(21)	4023434
12	20.0	0.0	2.8	chr9	10203030	10203065	(128191652)	+	(AGATAG)n	Simple_repeat	1	36	(0)	4023435
16	0.0	0.0	0.0	chr9	10203170	10203187	(128191530)	+	(T)n	Simple_repeat	1	18	(0)	4023436
261	34.3	0.0	3.9	chr9	10203195	10203297	(128191420)	+	L2c	LINE/L2	3285	3383	(4)	4023437
309	34.1	5.0	2.1	chr9	13071086	13071319	(125323398)	+	L1MEc	LINE/L1	512	752	(5650)	4027120
205	40.1	7.0	0.0	chr9	14563247	14563378	(123831339)	+	MIRc	SINE/MIR	80	221	(47)	4029174
17	11.7	0.0	7.0	chr9	14805804	14805846	(123588871)	+	(TTTGTT)n	Simple_repeat	1	43	(0)	4029476
2220	11.1	0.7	0.3	chr9	14806254	14806551	(123588166)	C	AluSq2	SINE/Alu	(12)	301	3	4029477
16	22.0	0.0	6.7	chr9	15510372	15510431	(122884286)	+	G-rich	Low_complexity	1	60	(0)	4030657
1645	20.9	6.5	0.5	chr9	16592290	16592693	(121802024)	+	L1MB8	LINE/L1	5748	6177	(1)	4032132
11080	13.4	1.5	1.9	chr9	19269459	19270491	(119124226)	C	L1M1	LINE/L1	(5139)	2426	1400	4036007
11	27.7	0.0	0.0	chr9	20112812	20112850	(118281867)	+	(CCCCCAC)n	Simple_repeat	1	39	(0)	4037408
13	8.9	0.0	3.9	chr9	20398897	20398922	(117995795)	+	(AACA)n	Simple_repeat	1	26	(0)	4037823
622	28.9	8.0	2.4	chr9	21589409	21589678	(116805039)	C	LTR33	LTR/ERVL	(233)	287	1	4039406
483	28.0	2.8	12.9	chr9	21589713	21589913	(116804804)	C	LTR33A_	LTR/ERVL	(312)	219	40	4039407
1049	28.6	6.7	5.3	chr9	21738599	21739086	(116655631)	C	LTR16A2	LTR/ERVL	(0)	495	1	4039630
278	26.0	10.9	5.1	chr9	21739087	21739148	(116655569)	C	ORSL-2a	DNA/hAT-Tip100	(277)	65	1	4039629
16	4.5	0.0	0.0	chr9	23821697	23821719	(114572998)	+	(GGC)n	Simple_repeat	1	23	(0)	4042332
19	6.5	3.1	0.0	chr9	23821748	23821779	(114572938)	+	(CCGCG)n	Simple_repeat	1	33	(0)	4042333
2336	12.3	7.9	4.3	chr9	26786540	26786955	(111607762)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	4046130
740	28.0	7.1	4.3	chr9	26786956	26787500	(111607217)	+	L1MC5a	LINE/L1	2171	2458	(319)	4046129
3054	11.2	0.4	5.0	chr9	27080853	27081333	(111313384)	+	LTR71A	LTR/ERV1	1	459	(0)	4046616
268	24.7	13.1	5.8	chr9	33166120	33166274	(105228443)	C	MIRb	SINE/MIR	(8)	260	93	4054860
2016	9.5	3.5	0.0	chr9	35095732	35096004	(103298713)	+	AluSx1	SINE/Alu	1	283	(29)	4058344
264	21.1	0.0	1.9	chr9	35096008	35096060	(103298657)	+	MER5A	DNA/hAT-Charlie	78	129	(60)	4058345
261	25.0	4.2	0.0	chr9	35340730	35340797	(103053920)	+	MER117	DNA/hAT-Charlie	35	105	(92)	4058760
565	6.6	0.0	2.6	chr9	35488991	35489068	(102905649)	C	MER50B	LTR/ERV1	(621)	76	1	4058935
2059	14.4	7.2	0.0	chr9	35489069	35489415	(102905302)	+	THE1D	LTR/ERVL-MaLR	8	381	(0)	4058937
295	25.4	0.7	7.0	chr9	35882236	35882392	(102512325)	C	L1ME3G	LINE/L1	(2247)	3899	3753	4059558
650	26.1	6.7	1.3	chr9	36023675	36023829	(102370888)	C	MER5A1	DNA/hAT-Charlie	(2)	164	1	4059802
435	30.2	2.3	6.2	chr9	36023955	36024180	(102370537)	C	L1MEd	LINE/L1	(6858)	228	12	4059803
941	17.3	0.6	1.3	chr9	36419684	36419839	(101974878)	+	AluSc8	SINE/Alu	145	299	(12)	4060596
573	19.8	10.9	0.1	chr9	36420084	36420240	(101974477)	+	MIR	SINE/MIR	21	203	(27)	4060597
2643	7.1	0.0	0.0	chr9	36420251	36420547	(101974170)	+	AluY	SINE/Alu	1	297	(14)	4060598
2444	7.6	0.0	0.3	chr9	36573505	36573806	(101820911)	C	AluSq2	SINE/Alu	(12)	301	1	4061007
2146	9.4	0.0	6.4	chr9	36574304	36574631	(101820086)	+	AluSz6	SINE/Alu	2	308	(4)	4061008
1652	25.0	9.7	0.8	chr9	36861287	36861932	(101532785)	C	L2a	LINE/L2	(0)	3426	2713	4061595
260	24.7	3.6	6.9	chr9	37903534	37903620	(100491097)	+	MIR3	SINE/MIR	111	194	(14)	4063616
515	28.9	11.2	1.2	chr9	37957629	37957982	(100436735)	C	L2a	LINE/L2	(24)	3351	2961	4063709
2513	5.7	1.0	0.0	chr9	38226299	38226597	(100168120)	C	AluSx1	SINE/Alu	(10)	302	1	4064194
14	11.8	8.1	0.0	chr9	38226936	38226972	(100167745)	+	G-rich	Low_complexity	1	40	(0)	4064195
2010	20.6	2.4	0.0	chr9	38525827	38526199	(99868518)	+	MLT1A1	LTR/ERVL-MaLR	27	408	(0)	4064759
256	19.6	1.9	0.0	chr9	38657328	38657378	(99737339)	+	MER68C	LTR/ERVL	1	52	(367)	4064962
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
233	16.7	0.0	0.0	chr9	68708266	68708307	(69686410)	+	L2b	LINE/L2	3333	3374	(1)	4080305
584	27.9	10.7	6.1	chr9	69144547	69144840	(69249877)	C	MLT1K	LTR/ERVL-MaLR	(6)	589	281	4081093
4854	11.4	1.0	7.3	chr9	70465531	70466366	(67928351)	C	LTR1	LTR/ERV1	(0)	783	1	4083223
1199	8.5	0.7	0.0	chr9	72038881	72039033	(66355684)	C	AluJo	SINE/Alu	(137)	175	22	4085740
752	28.8	6.5	2.8	chr9	72039590	72039871	(66354846)	+	MLT1G3	LTR/ERVL-MaLR	1	293	(302)	4085741
2274	12.3	0.0	0.0	chr9	72076758	72077065	(66317652)	+	AluSx4	SINE/Alu	2	309	(1)	4085812
21991	6.8	0.6	0.2	chr9	72077066	72078971	(66315746)	+	L1PA7	LINE/L1	4564	6467	(2)	4085811
697	19.7	0.0	2.3	chr9	72139538	72139669	(66255048)	+	FLAM_C	SINE/Alu	1	129	(14)	4085946
38	4.2	4.1	0.0	chr9	72304685	72304733	(66089984)	+	(CT)n	Simple_repeat	1	51	(0)	4086250
474	25.5	8.9	7.3	chr9	72304753	72304972	(66089745)	C	LTR85a	LTR/Gypsy?	(277)	425	202	4086249
529	26.9	3.8	2.9	chr9	72305046	72305252	(66089465)	C	MLT1K	LTR/ERVL-MaLR	(17)	578	370	4086251
574	29.9	9.0	2.1	chr9	72476845	72477124	(65917593)	+	MER102a	DNA/hAT-Charlie	30	330	(0)	4086608
898	23.7	3.4	7.3	chr9	73377114	73377509	(65017208)	C	L1ME1	LINE/L1	(2820)	3326	2947	4087991
986	28.0	7.8	1.1	chr9	73377489	73378032	(65016685)	C	L1M1	LINE/L1	(5445)	2120	1719	4087994
1284	18.6	8.8	2.1	chr9	75087385	75087670	(63307047)	C	MER58B	DNA/hAT-Charlie	(0)	341	35	4090517
625	27.9	9.2	9.2	chr9	78011404	78012233	(60382484)	+	HAL1b	LINE/L1	762	1582	(839)	4095123
195	27.6	13.4	0.0	chr9	79473819	79473876	(58920841)	C	MamRTE1	LINE/RTE-BovB	(2701)	1111	1045	4097289
557	27.1	4.9	2.5	chr9	80062053	80062211	(58332506)	+	LFSINE_Vert	SINE/tRNA	15	177	(282)	4098135
20294	15.2	2.5	2.6	chr9	80338217	80340917	(58053800)	+	L1MA4	LINE/L1	13	2736	(4829)	4098489
12	27.6	2.3	0.0	chr9	83062526	83062569	(55332148)	+	(CGT)n	Simple_repeat	1	45	(0)	4102320
5420	26.2	4.2	7.9	chr9	83543110	83545346	(54849371)	+	L1PA15-16	LINE/L1	284	2144	(4709)	4103075
804	18.7	7.6	1.2	chr9	84163135	84163307	(54231410)	+	MER5A	DNA/hAT-Charlie	2	186	(3)	4104168
331	36.9	2.0	2.5	chr9	85424915	85425081	(52969636)	C	MER5A	DNA/hAT-Charlie	(4)	185	8	4106192
396	34.0	6.9	0.5	chr9	85581244	85581447	(52813270)	+	MIRc	SINE/MIR	2	219	(49)	4106406
584	33.1	15.3	2.1	chr9	87433663	87434142	(50960575)	C	ERVL-E-int	LTR/ERVL	(1805)	3862	3318	4109477
598	32.2	8.6	4.6	chr9	87445707	87446187	(50948530)	+	MLT1J	LTR/ERVL-MaLR	1	502	(10)	4109494
5347	13.0	0.8	0.0	chr9	87949762	87950555	(50444162)	C	L1PA16	LINE/L1	(3)	6163	5364	4110207
9670	17.2	4.9	1.6	chr9	87950551	87952312	(50442405)	C	L1P4d	LINE/L1	(4966)	1969	146	4110208
20	8.0	0.0	0.0	chr9	89180557	89180583	(49214134)	+	(A)n	Simple_repeat	1	27	(0)	4112193
243	21.0	11.0	8.0	chr9	90142375	90142462	(48252255)	C	L1ME4a	LINE/L1	(442)	5682	5592	4113464
1987	18.5	6.3	4.3	chr9	90269925	90270342	(48124375)	+	MSTB1	LTR/ERVL-MaLR	1	427	(5)	4113622
279	32.5	4.4	0.0	chr9	90895258	90895408	(47499309)	C	MER5A1	DNA/hAT-Charlie	(7)	159	2	4114430
266	31.9	6.8	1.6	chr9	92377773	92377966	(46016751)	C	L1MDa	LINE/L1	(5642)	905	701	4116626
684	29.5	0.7	5.4	chr9	92378328	92378624	(46016093)	C	L1MDa	LINE/L1	(6315)	325	43	4116626
2677	19.9	11.5	0.0	chr9	92765601	92766169	(45628548)	+	MER73	LTR/ERVL	2	644	(0)	4117181
259	24.4	18.6	1.0	chr9	92766170	92766325	(45628392)	C	L1MC4	LINE/L1	(252)	7790	7611	4117180
298	27.8	4.4	0.0	chr9	92766340	92766447	(45628270)	C	L1MC4	LINE/L1	(533)	7509	7397	4117180
2392	8.1	2.0	0.0	chr9	93074614	93074911	(45319806)	C	AluSc5	SINE/Alu	(5)	304	1	4117667
286	28.7	9.2	4.8	chr9	93075101	93075265	(45319452)	C	L1M5	LINE/L1	(694)	5430	5258	4117668
1651	18.2	3.6	2.4	chr9	93890034	93890416	(44504301)	+	L1MB4	LINE/L1	5449	5836	(344)	4118701
414	21.0	10.1	0.0	chr9	93890425	93890567	(44504150)	+	Tigger18a	DNA/TcMar-Tigger	655	813	(39)	4118702
1824	16.1	6.0	1.6	chr9	94112656	94113022	(44281695)	+	MLT1A1	LTR/ERVL-MaLR	25	408	(0)	4119031
2450	18.2	1.7	3.1	chr9	94113026	94113501	(44281216)	+	MLT1A1-int	LTR/ERVL-MaLR	4	472	(1263)	4119031
24	16.1	1.7	3.3	chr9	95048431	95048489	(43346228)	+	G-rich	Low_complexity	1	60	(0)	4120664
384	28.2	5.7	2.6	chr9	96416871	96417023	(41977694)	+	MIR3	SINE/MIR	30	187	(21)	4122830
18	29.8	2.5	1.2	chr9	96450417	96450495	(41944222)	+	(GCG)n	Simple_repeat	1	81	(0)	4122913
2673	17.2	1.7	0.0	chr9	97742584	97743047	(40651670)	+	MER70A	LTR/ERVL	1	472	(0)	4125038
351	23.3	15.6	4.2	chr9	97743048	97743236	(40651481)	C	MER113A	DNA/hAT-Charlie	(67)	247	27	4125037
486	34.9	5.5	2.7	chr9	97744513	97744883	(40649834)	C	L4_C_Mam	LINE/RTE-X	(86)	5052	4671	4125042
593	26.6	9.4	2.6	chr9	97744944	97745132	(40649585)	C	MIRc	SINE/MIR	(6)	262	60	4125043
295	30.7	7.3	5.2	chr9	98263561	98263694	(40131023)	+	MIRb	SINE/MIR	95	231	(31)	4126201
17	10.0	0.0	5.6	chr9	105694838	105694873	(32699844)	+	G-rich	Low_complexity	1	36	(0)	4137932
12	25.1	4.3	0.0	chr9	105695159	105695205	(32699512)	+	(CTCG)n	Simple_repeat	1	49	(0)	4137933
1083	23.7	15.4	4.0	chr9	109503837	109504288	(28890429)	C	L2a	LINE/L2	(4)	3422	2910	4144636
504	26.4	4.0	8.2	chr9	109504467	109504648	(28890069)	C	Charlie29a	DNA/hAT-Charlie	(544)	175	2	4144637
2879	27.1	16.8	2.5	chr9	110476361	110477695	(27917022)	+	L2a	LINE/L2	40	1603	(1816)	4146335
17	27.7	1.4	2.9	chr9	111037976	111038044	(27356673)	+	(CACCCG)n	Simple_repeat	1	70	(0)	4147191
17	26.9	0.0	3.2	chr9	111038222	111038283	(27356434)	+	(CCCCGCC)n	Simple_repeat	1	62	(0)	4147192
13	16.9	11.3	0.0	chr9	111038362	111038414	(27356303)	+	(GGCTCCGC)n	Simple_repeat	1	59	(0)	4147193
7556	23.1	9.0	7.1	chr9	111399193	111401186	(26993531)	+	L1MA4	LINE/L1	40	2903	(4662)	4147785
17	6.9	3.0	2.9	chr9	112176128	112176160	(26218557)	+	(TGGGAT)n	Simple_repeat	1	34	(0)	4149312
2109	10.8	0.0	0.0	chr9	112176219	112176495	(26218222)	+	AluSx1	SINE/Alu	1	277	(35)	4149313
286	29.2	5.8	3.4	chr9	112670482	112670598	(25724119)	+	LTR88a	LTR/Gypsy?	687	806	(10)	4150266
3527	19.7	5.7	6.9	chr9	113454638	113455323	(24939394)	C	L1MEc	LINE/L1	(5685)	715	20	4151706
254	29.0	5.3	0.0	chr9	114123750	114123856	(24270861)	+	Charlie4z	DNA/hAT-Charlie	15	127	(40)	4153002
289	27.2	4.6	3.1	chr9	114397685	114397813	(23996904)	+	MIR3	SINE/MIR	61	191	(17)	4153587
19	4.0	3.9	0.0	chr9	116305447	116305472	(22089245)	+	(CT)n	Simple_repeat	1	27	(0)	4157119
24	16.6	0.0	0.0	chr9	116305472	116305512	(22089205)	+	(CA)n	Simple_repeat	1	41	(0)	4157120
277	27.0	18.7	0.0	chr9	120902169	120902268	(17492449)	+	MER5B	DNA/hAT-Charlie	20	142	(36)	4165955
17	15.1	1.7	0.0	chr9	120902496	120902529	(17492188)	+	G-rich	Low_complexity	1	34	(0)	4165956
382	34.0	14.5	1.1	chr9	120902655	120902916	(17491801)	+	L2b	LINE/L2	3070	3372	(3)	4165957
15136	13.7	1.5	2.6	chr9	121421285	121423251	(16971466)	C	L1M1	LINE/L1	(4680)	2885	915	4166953
404	30.2	10.0	2.0	chr9	121695357	121695546	(16699171)	C	MIRb	SINE/MIR	(3)	265	54	4167570
1163	28.8	12.2	2.5	chr9	121957519	121957910	(16436807)	+	MER115	DNA/hAT-Tip100	2	436	(257)	4168017
19	16.8	0.0	5.8	chr9	122228580	122228631	(16166086)	+	(CCCGG)n	Simple_repeat	1	52	(0)	4168588
25	20.1	0.0	3.0	chr9	122228850	122228915	(16165802)	+	(GGCCCC)n	Simple_repeat	1	66	(0)	4168589
2086	13.3	0.3	0.7	chr9	122454236	122454528	(15940189)	+	AluSx3	SINE/Alu	1	292	(19)	4169053
3090	19.3	3.5	1.4	chr9	122454890	122456171	(15938546)	C	L1MB5	LINE/L1	(188)	5986	4676	4169054
534	25.2	2.3	0.0	chr9	123808930	123809056	(14585661)	+	LTR67B	LTR/ERVL	47	176	(444)	4171303
2370	14.9	2.3	3.6	chr9	124655928	124656365	(13738352)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	4172994
489	23.8	9.1	0.6	chr9	127601358	127601539	(10793178)	+	L2a	LINE/L2	3221	3419	(7)	4178607
308	21.8	12.4	2.5	chr9	127601569	127601648	(10793069)	C	MER119	DNA/hAT-Charlie	(0)	583	495	4178608
956	14.3	0.0	0.0	chr9	127601652	127601784	(10792933)	+	FLAM_C	SINE/Alu	1	133	(10)	4178609
1101	15.5	4.4	1.5	chr9	127601816	127602012	(10792705)	+	MSTD	LTR/ERVL-MaLR	194	396	(0)	4178610
533	30.4	6.5	3.6	chr9	127773398	127773622	(10621095)	+	MIRb	SINE/MIR	34	265	(3)	4178984
1844	9.8	9.3	1.4	chr9	128192114	128192399	(10202318)	+	AluJb	SINE/Alu	1	311	(1)	4179939
1455	19.5	4.3	0.0	chr9	129575304	129575595	(8819122)	+	MLT1B	LTR/ERVL-MaLR	86	390	(0)	4183164
548	29.9	0.7	0.0	chr9	129575597	129575740	(8818977)	C	MIR	SINE/MIR	(98)	164	20	4183169
30	3.5	0.0	0.0	chr9	129576015	129576044	(8818673)	+	(AC)n	Simple_repeat	1	30	(0)	4183170
164	19.7	6.9	1.3	chr9	129576051	129576556	(8818161)	+	(ACTC)n	Simple_repeat	1	541	(0)	4183171
2422	8.6	0.3	0.3	chr9	130736487	130736790	(7657927)	C	AluSp	SINE/Alu	(9)	304	1	4185693
813	28.8	1.5	6.0	chr9	130736791	130736863	(7657854)	C	L1MC5	LINE/L1	(2495)	5387	5326	4185689
319	20.5	6.7	0.0	chr9	130737017	130737099	(7657618)	C	MER5B	DNA/hAT-Charlie	(40)	138	50	4185694
542	15.2	1.0	2.9	chr9	130737116	130737217	(7657500)	C	MER92B	LTR/ERV1	(24)	612	513	4185695
238	27.2	6.1	3.2	chr9	131735482	131735576	(6659141)	+	L2b	LINE/L2	3272	3369	(6)	4187581
559	28.4	5.1	10.3	chr9	131735674	131735983	(6658734)	C	MER102b	DNA/hAT-Charlie	(41)	300	8	4187582
2118	10.7	0.7	0.3	chr9	131755248	131755546	(6639171)	+	AluJb	SINE/Alu	1	300	(12)	4187627
205	26.3	3.8	3.8	chr9	132936662	132936740	(5457977)	+	L2a	LINE/L2	3279	3357	(30)	4189738
2264	10.3	0.3	0.0	chr9	132937162	132937451	(5457266)	+	AluSp	SINE/Alu	1	291	(22)	4189750
254	25.8	6.4	10.8	chr9	134130766	134130831	(4263886)	+	MIR	SINE/MIR	203	260	(2)	4191622
182	30.4	1.8	0.0	chr9	134572867	134572922	(3821795)	C	L2b	LINE/L2	(25)	3350	3294	4192193
277	32.6	9.2	5.3	chr9	134982886	134983189	(3411528)	C	L2b	LINE/L2	(29)	3346	3030	4192621
1162	18.0	3.7	0.0	chr9	134983374	134983606	(3411111)	+	MLT1D	LTR/ERVL-MaLR	4	245	(260)	4192622
220	22.6	6.2	6.2	chr9	135797692	135797804	(2596913)	+	L2	LINE/L2	2398	2510	(909)	4193635
199	31.4	2.3	1.1	chr9	136488489	136488575	(1906142)	+	MIR3	SINE/MIR	97	184	(24)	4194426
197	25.0	14.6	4.3	chr9	136488505	136488596	(1906121)	C	MamRTE1	LINE/RTE-BovB	(1695)	2117	2015	4194427
397	28.2	7.1	0.0	chr9	136488609	136488725	(1905992)	+	MIRb	SINE/MIR	50	175	(93)	4194428
841	19.7	0.0	0.0	chr9	136488864	136488995	(1905722)	+	FLAM_C	SINE/Alu	2	133	(10)	4194429
918	18.7	11.3	0.0	chr9	137294334	137294568	(1100149)	+	MLT1J	LTR/ERVL-MaLR	42	306	(206)	4195471
2126	11.5	0.0	1.3	chr9	137688018	137688322	(706395)	C	AluSz	SINE/Alu	(10)	302	2	4196038
653	25.1	10.4	0.0	chr9	137688323	137688433	(706284)	C	L1M4	LINE/L1	(1761)	4385	4274	4196034
1578	19.0	9.5	0.6	chrX	9340560	9340893	(146700002)	+	MLT1B	LTR/ERVL-MaLR	23	389	(1)	4374600
16	5.3	0.0	0.0	chrX	9558543	9558562	(146482333)	+	(TA)n	Simple_repeat	1	20	(0)	4375000
430	33.7	9.3	3.9	chrX	9558798	9559313	(146481582)	+	L4_A_Mam	LINE/RTE-X	4403	4949	(41)	4375001
242	27.5	1.4	0.0	chrX	10756484	10756552	(145284343)	C	MIR3	SINE/MIR	(6)	202	133	4376955
1896	23.6	6.1	5.4	chrX	13445113	13445668	(142595227)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	4381185
1850	16.5	5.1	0.0	chrX	14067495	14067863	(141973032)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2236	4382233
655	18.7	0.0	1.6	chrX	14067867	14067991	(141972904)	C	Charlie5	DNA/hAT-Charlie	(2501)	123	1	4382234
272	23.6	4.4	0.0	chrX	14068181	14068247	(141972648)	C	L2a	LINE/L2	(22)	3404	3272	4382235
1006	26.9	4.9	14.3	chrX	14068306	14068822	(141972073)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	4382236
270	33.9	4.4	8.8	chrX	15816121	15816427	(140224468)	C	L3	LINE/CR1	(23)	4076	3784	4385024
259	17.1	1.4	4.1	chrX	16882502	16882574	(139158321)	+	L1ME4a	LINE/L1	6004	6074	(50)	4386895
857	16.3	8.5	7.1	chrX	16883519	16883666	(139157229)	+	MER3	DNA/hAT-Charlie	1	149	(60)	4386897
1680	16.5	6.2	0.3	chrX	16883667	16883957	(139156938)	C	AluJr	SINE/Alu	(2)	310	2	4386898
857	16.3	8.5	7.1	chrX	16883958	16884006	(139156889)	+	MER3	DNA/hAT-Charlie	150	201	(8)	4386897
967	21.8	15.3	3.2	chrX	21738590	21738936	(134301959)	+	LTR16B2	LTR/ERVL	2	409	(53)	4394849
14	21.4	2.2	2.2	chrX	21739092	21739136	(134301759)	+	(CCCCAC)n	Simple_repeat	1	46	(0)	4394850
2357	9.1	0.3	1.3	chrX	23806891	23807199	(132233696)	+	AluSx1	SINE/Alu	1	306	(6)	4398128
14268	8.8	1.5	4.3	chrX	23918088	23920226	(132120669)	C	L1M1	LINE/L1	(3938)	3627	1550	4398389
446	29.3	5.3	14.5	chrX	24371719	24372117	(131668778)	C	LTR78B	LTR/ERV1	(919)	377	18	4399383
5694	22.1	6.7	7.7	chrX	24416736	24416956	(131623939)	+	MLT-int	LTR/ERVL-MaLR	1384	1578	(157)	4399469
1821	19.4	6.2	1.9	chrX	24416957	24417329	(131623566)	+	MSTD	LTR/ERVL-MaLR	7	396	(0)	4399472
14	19.3	2.3	2.3	chrX	24647187	24647229	(131393666)	+	(TCTCCCC)n	Simple_repeat	1	44	(0)	4399907
12	23.6	8.3	0.0	chrX	24647230	24647245	(131393650)	+	(TTCTCCCC)n	Simple_repeat	2	65	(0)	4399908
17	0.0	0.0	0.0	chrX	24647275	24647293	(131393602)	+	(CT)n	Simple_repeat	1	19	(0)	4399909
2945	16.1	4.5	5.0	chrX	26869785	26870372	(129170523)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1047	4402947
2869	13.6	3.6	4.7	chrX	26870373	26870904	(129169991)	C	LTR22B1	LTR/ERVK	(0)	526	1	4402948
324	35.5	6.2	2.5	chrX	27162424	27162625	(128878270)	+	MIRb	SINE/MIR	27	236	(32)	4403416
836	26.5	9.0	5.8	chrX	39753076	39753559	(116287336)	C	L2a	LINE/L2	(3)	3423	2875	4421114
350	25.2	3.5	0.9	chrX	40465913	40466024	(115574871)	C	MLT1O	LTR/ERVL-MaLR	(24)	518	404	4422510
227	32.5	5.3	0.0	chrX	40466077	40466202	(115574693)	C	MLT1O	LTR/ERVL-MaLR	(146)	396	264	4422510
206	26.4	0.0	0.0	chrX	40466215	40466267	(115574628)	+	L2a	LINE/L2	3339	3391	(35)	4422511
414	24.8	2.2	3.6	chrX	40466268	40466405	(115574490)	C	MLT1O	LTR/ERVL-MaLR	(297)	245	110	4422510
1340	17.8	6.4	4.0	chrX	41089904	41090206	(114950689)	C	AluJb	SINE/Alu	(0)	312	1	4423649
314	32.2	7.3	0.0	chrX	41154419	41154533	(114886362)	C	LTR101_Mam	LTR/ERVL	(414)	415	292	4423762
12	7.7	0.0	9.1	chrX	44872809	44872841	(111168054)	+	(CCTCC)n	Simple_repeat	1	33	(0)	4429938
446	33.2	2.1	2.6	chrX	45231012	45231200	(110809695)	C	Kanga11a	DNA/TcMar-Tc2	(778)	192	5	4430517
1012	31.3	6.9	2.3	chrX	45814684	45815124	(110225771)	+	L2	LINE/L2	1964	2426	(993)	4431232
232	35.3	1.2	0.0	chrX	45815161	45815245	(110225650)	C	MIR3	SINE/MIR	(36)	172	87	4431239
1574	26.9	12.1	2.6	chrX	46507367	46507455	(109533440)	+	HAL1	LINE/L1	2042	2132	(375)	4432252
416	18.0	0.0	0.0	chrX	46507458	46507518	(109533377)	+	MER2B	DNA/TcMar-Tigger	1	61	(275)	4432254
545	24.3	3.0	0.0	chrX	46507510	46507639	(109533256)	+	MER2	DNA/TcMar-Tigger	97	345	(0)	4432255
2245	10.6	0.3	0.0	chrX	46796286	46796586	(109244309)	C	AluSx1	SINE/Alu	(10)	302	1	4432770
2250	10.3	0.3	0.0	chrX	46802872	46803163	(109237732)	C	AluSx3	SINE/Alu	(18)	293	1	4432793
1343	24.4	7.5	4.6	chrX	46803164	46803188	(109237707)	C	L1ME4b	LINE/L1	(0)	892	873	4432794
1989	15.6	9.1	1.9	chrX	46803189	46803566	(109237329)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4432795
1343	24.4	7.5	4.6	chrX	46803567	46803608	(109237287)	C	L1ME4b	LINE/L1	(20)	872	834	4432794
2361	9.8	0.0	0.0	chrX	46803609	46803914	(109236981)	C	AluSq	SINE/Alu	(7)	306	1	4432796
18750	13.4	1.4	1.8	chrX	47113340	47114965	(108925930)	+	L1M1	LINE/L1	830	2453	(5112)	4433400
1801	26.2	8.7	7.2	chrX	53071275	53071735	(102969160)	C	MER20B	DNA/hAT-Charlie	(265)	518	6	4442993
446	31.0	7.8	4.9	chrX	53284503	53284780	(102756115)	+	L2b	LINE/L2	3078	3408	(18)	4443392
774	24.2	13.6	4.6	chrX	53285063	53285408	(102755487)	+	L2c	LINE/L2	3006	3387	(0)	4443393
854	35.3	2.9	4.4	chrX	53832041	53832493	(102208402)	C	L1MA7	LINE/L1	(5695)	1801	1356	4444482
18	4.7	0.0	0.0	chrX	54530146	54530167	(101510728)	+	(C)n	Simple_repeat	1	22	(0)	4446015
19323	19.4	2.2	2.9	chrX	56485382	56488306	(99552589)	C	L1PA10	LINE/L1	(3594)	4547	10	4448229
426	34.3	3.1	3.1	chrX	68916955	68917246	(87123649)	C	L2b	LINE/L2	(503)	2916	2625	4457214
11	29.7	1.6	3.2	chrX	69285842	69285902	(86754993)	+	A-rich	Low_complexity	1	62	(0)	4457939
19	8.1	0.0	0.0	chrX	69286585	69286610	(86754285)	+	(TG)n	Simple_repeat	1	26	(0)	4457940
545	30.2	2.5	3.5	chrX	69286644	69286842	(86754053)	+	MIR3	SINE/MIR	7	203	(5)	4457941
2454	16.7	3.1	0.2	chrX	69467493	69467935	(86572960)	+	MSTB2	LTR/ERVL-MaLR	1	456	(1)	4458239
16	14.9	2.7	0.0	chrX	70433810	70433846	(85607049)	+	G-rich	Low_complexity	1	38	(0)	4459669
20575	13.8	3.7	2.0	chrX	70613123	70616531	(85424364)	+	L1M1	LINE/L1	17	3485	(4080)	4459943
1618	18.1	3.2	0.0	chrX	70913257	70913532	(85127363)	+	AluJb	SINE/Alu	1	285	(27)	4460391
855	27.9	7.3	7.3	chrX	70913533	70914010	(85126885)	+	L1ME4b	LINE/L1	5374	5716	(408)	4460392
2309	10.5	0.3	0.0	chrX	70914022	70914326	(85126569)	+	AluSx1	SINE/Alu	1	306	(6)	4460393
17	5.0	0.0	0.0	chrX	70914378	70914398	(85126497)	+	(A)n	Simple_repeat	1	21	(0)	4460394
377	25.0	0.0	0.0	chrX	70914414	70914485	(85126410)	+	AluJb	SINE/Alu	3	74	(238)	4460395
1251	19.2	6.7	10.2	chrX	74015064	74015421	(82025474)	+	L1MA4	LINE/L1	3628	3974	(3588)	4465091
3677	25.9	8.3	6.3	chrX	74015419	74016323	(82024572)	+	L1MA5	LINE/L1	1727	2579	(4986)	4465094
11	18.8	2.4	4.8	chrX	74241640	74241680	(81799215)	+	(ATTAATA)n	Simple_repeat	1	42	(0)	4465315
500	29.0	1.8	5.1	chrX	74534364	74534541	(81506354)	C	MIR3	SINE/MIR	(5)	203	32	4465785
294	24.3	1.8	0.0	chrX	74534544	74534618	(81506277)	C	MIR3	SINE/MIR	(52)	156	85	4465786
18909	14.2	1.5	0.9	chrX	75219869	75223929	(80816966)	C	L1M1	LINE/L1	(3455)	4110	16	4466569
16101	16.5	2.5	1.0	chrX	77467132	77469851	(78571044)	+	L1M1	LINE/L1	15	2777	(4788)	4468359
317	25.3	1.3	0.0	chrX	81122450	81122524	(74918371)	+	MER96B	DNA/hAT-Tip100	1	76	(341)	4472538
905	16.9	0.0	1.1	chrX	81122571	81122749	(74918146)	C	MER96B	DNA/hAT-Tip100	(237)	180	4	4472539
16	21.3	2.6	0.0	chrX	85243850	85243887	(70797008)	+	(GC)n	Simple_repeat	1	39	(0)	4476826
43	4.3	0.0	0.0	chrX	85244124	85244171	(70796724)	+	(GGC)n	Simple_repeat	1	48	(0)	4476827
10611	20.8	3.4	1.3	chrX	93394027	93396324	(62644571)	C	L1M1	LINE/L1	(5205)	2360	13	4485579
18812	15.6	2.3	0.8	chrX	95238868	95246445	(60794450)	+	L1MA1	LINE/L1	16	7717	(4)	4487739
18	17.6	0.0	0.0	chrX	100348905	100348936	(55691959)	+	(T)n	Simple_repeat	1	32	(0)	4494173
721	18.2	0.0	0.0	chrX	100348964	100349073	(55691822)	C	AluJr	SINE/Alu	(201)	111	2	4494174
7546	14.2	2.1	2.7	chrX	100497517	100498139	(55542756)	+	L1MA5	LINE/L1	3957	4553	(1590)	4494397
1838	16.8	0.0	1.0	chrX	100498140	100498436	(55542459)	+	AluJb	SINE/Alu	12	305	(7)	4494398
2596	7.1	0.3	0.0	chrX	100671442	100671737	(55369158)	C	AluY	SINE/Alu	(14)	297	1	4494640
3645	23.3	3.5	3.2	chrX	100767649	100768807	(55272088)	C	L1M4c	LINE/L1	(4535)	2199	1150	4494791
12	8.9	4.2	0.0	chrX	100868500	100868523	(55172372)	+	(CCCT)n	Simple_repeat	1	25	(0)	4494912
16	22.1	0.0	0.0	chrX	100868692	100868723	(55172172)	+	(T)n	Simple_repeat	1	32	(0)	4494913
187	23.9	17.8	7.4	chrX	103731447	103731541	(52309354)	+	AmnSINE1	SINE/5S-Deu-L2	444	550	(25)	4499069
185	34.7	9.0	2.4	chrX	104136696	104136819	(51904076)	+	L2c	LINE/L2	3136	3268	(119)	4499612
17	0.0	0.0	0.0	chrX	104168879	104168897	(51871998)	+	(T)n	Simple_repeat	1	19	(0)	4499667
486	24.7	8.3	9.7	chrX	104547097	104547365	(51493530)	C	MamTip1	DNA/hAT-Tip100	(2)	265	1	4500370
10318	2.9	0.2	0.1	chrX	104547693	104548954	(51491941)	C	L1PA3	LINE/L1	(1831)	4315	3053	4500371
1573	20.9	8.8	3.0	chrX	107247050	107247479	(48793416)	+	MSTB2	LTR/ERVL-MaLR	1	457	(0)	4503861
3155	14.0	2.2	0.0	chrX	107268778	107269346	(48771549)	+	L1MA9	LINE/L1	5234	5820	(492)	4503905
1649	17.0	3.7	3.5	chrX	107269350	107269726	(48771169)	+	L1MA9	LINE/L1	5935	6312	(0)	4503905
2689	20.2	1.5	1.3	chrX	107933721	107934242	(48106653)	C	LTR75	LTR/ERVL	(39)	523	1	4505068
427	16.2	1.4	0.0	chrX	108447579	108447646	(47593249)	C	L1ME4a	LINE/L1	(538)	5586	5518	4505834
18667	16.3	2.4	2.0	chrX	109293839	109296169	(46744726)	C	L1MA2	LINE/L1	(5173)	2392	16	4506659
10267	21.1	3.5	2.0	chrX	113927677	113930353	(42110542)	C	L1MA4	LINE/L1	(4144)	3421	12	4513397
13105	12.3	6.3	3.1	chrX	115133509	115135110	(40905785)	+	Tigger1	DNA/TcMar-Tigger	69	1737	(681)	4514988
274	38.0	2.5	3.1	chrX	115591770	115591932	(40448963)	C	MIRc	SINE/MIR	(104)	164	3	4515801
12516	17.0	8.3	1.2	chrX	115972585	115975161	(40065734)	+	L1M1	LINE/L1	11	2781	(4784)	4516179
17428	17.5	2.3	4.7	chrX	116521349	116524746	(39516149)	C	L1M1	LINE/L1	(4098)	3467	152	4516784
1946	1.3	0.0	3.0	chrX	119177663	119177898	(36862997)	C	L1PA4	LINE/L1	(1)	6154	5926	4520583
438	27.5	7.4	6.4	chrX	119729736	119729937	(36310958)	C	MIR	SINE/MIR	(2)	260	57	4521683
12	9.7	0.0	0.0	chrX	119730152	119730173	(36310722)	+	(AATA)n	Simple_repeat	1	22	(0)	4521684
2083	10.4	0.3	0.0	chrX	119730175	119730461	(36310434)	+	AluSg	SINE/Alu	1	288	(22)	4521685
2310	6.5	0.4	0.0	chrX	120497803	120498078	(35542817)	C	AluSx	SINE/Alu	(35)	277	1	4523057
2117	12.8	0.7	0.0	chrX	120498453	120498749	(35542146)	+	AluSz6	SINE/Alu	2	300	(12)	4523058
18359	15.7	3.9	1.1	chrX	121569706	121572818	(34468077)	+	L1MA3	LINE/L1	11	3214	(4351)	4524585
21762	9.1	1.1	0.3	chrX	123529008	123533449	(32507446)	C	L1PA11	LINE/L1	(6)	6353	1878	4526888
189	18.2	0.0	0.0	chrX	123815364	123815396	(32225499)	C	L2b	LINE/L2	(8)	3367	3335	4527414
221	29.3	1.2	6.8	chrX	124446915	124447002	(31593893)	C	L3b	LINE/CR1	(197)	5035	4953	4528681
1206	31.2	7.9	3.8	chrX	124447446	124448084	(31592811)	+	L2	LINE/L2	1863	2530	(889)	4528682
6856	26.1	7.0	3.6	chrX	128105035	128107675	(27933220)	C	L1MA4	LINE/L1	(3874)	3691	256	4532969
257	29.0	4.8	2.0	chrX	130329458	130329559	(25711336)	+	L2	LINE/L2	2866	2970	(449)	4536361
475	34.5	3.7	6.6	chrX	130329609	130329676	(25711219)	C	L1M5	LINE/L1	(848)	5298	5234	4536362
2473	16.4	2.8	0.5	chrX	133843183	133843598	(22197297)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	4541662
2422	22.6	1.3	1.5	chrX	133843599	133843750	(22197145)	+	MLT1F	LTR/ERVL-MaLR	400	548	(0)	4541661
575	24.0	3.1	3.1	chrX	134372652	134372810	(21668085)	C	MIRb	SINE/MIR	(14)	254	96	4542539
201	29.1	0.0	0.0	chrX	134372880	134372934	(21667961)	+	MIRc	SINE/MIR	171	225	(43)	4542540
869	17.1	10.1	4.5	chrX	135041737	135041914	(20998981)	+	THE1C	LTR/ERVL-MaLR	193	381	(0)	4543860
2010	14.2	7.0	5.8	chrX	135041915	135042294	(20998601)	+	MSTC	LTR/ERVL-MaLR	44	428	(0)	4543859
8026	11.5	1.2	0.4	chrX	135042364	135044393	(20996502)	C	L1PA15	LINE/L1	(3)	6162	4119	4543862
8720	5.2	0.6	0.5	chrX	135206317	135207322	(20833573)	+	LTR13	LTR/ERVK	1	1007	(0)	4544065
311	38.1	8.4	3.5	chrX	135477492	135477809	(20563086)	+	L2a	LINE/L2	1030	1364	(2055)	4544392
467	18.0	10.5	2.3	chrX	135477810	135477844	(20563051)	C	MLT2D	LTR/ERVL	(9)	551	509	4544393
41	2.6	0.0	0.0	chrX	135477845	135477884	(20563011)	+	(GT)n	Simple_repeat	1	40	(0)	4544394
467	18.0	10.5	2.3	chrX	135477885	135477979	(20562916)	C	MLT2D	LTR/ERVL	(52)	508	409	4544393
1744	15.8	3.3	0.0	chrX	135627770	135628061	(20412834)	+	AluSz6	SINE/Alu	5	306	(6)	4544622
2278	33.4	7.2	8.4	chrX	135628062	135631476	(20409419)	C	HERV4_I-int	LTR/ERV1	(2709)	5047	1634	4544618
13372	9.2	0.4	0.4	chrX	135898319	135900592	(20140303)	C	L1PA10	LINE/L1	(339)	5829	3549	4545057
1040	14.2	3.6	0.6	chrX	136162427	136162588	(19878307)	+	AluJo	SINE/Alu	64	230	(82)	4545534
794	16.6	0.0	3.3	chrX	136162590	136162739	(19878156)	+	MER5A	DNA/hAT-Charlie	43	187	(2)	4545535
239	20.8	0.0	2.0	chrX	136162759	136162807	(19878088)	+	MER5B	DNA/hAT-Charlie	1	48	(130)	4545536
1868	16.7	7.8	1.6	chrX	136162832	136163202	(19877693)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	1	4545537
182	21.3	15.3	0.0	chrX	136163203	136163263	(19877632)	+	MER5B	DNA/hAT-Charlie	107	178	(0)	4545538
1391	12.2	5.1	4.2	chrX	136329672	136329844	(19711051)	C	AluJo	SINE/Alu	(14)	298	135	4545810
1473	33.2	7.5	6.5	chrX	136528400	136528985	(19511910)	+	L2b	LINE/L2	2622	3205	(170)	4546125
748	33.0	8.2	2.0	chrX	136529071	136529259	(19511636)	C	L2a	LINE/L2	(5)	3370	3149	4546128
1490	8.2	6.4	8.0	chrX	136529260	136529306	(19511589)	+	L1PA15	LINE/L1	5929	5966	(199)	4546129
2641	8.7	0.0	0.0	chrX	136529307	136529615	(19511280)	+	AluSx4	SINE/Alu	2	310	(0)	4546130
12	18.3	5.4	0.0	chrX	140764845	140764881	(15276014)	+	(GGCTCCC)n	Simple_repeat	1	39	(0)	4552758
562	23.6	2.4	0.6	chrX	140764940	140765105	(15275790)	+	MER96B	DNA/hAT-Tip100	13	181	(236)	4552759
1766	19.4	11.1	1.9	chrX	149327331	149327697	(6713198)	+	MLT1A1	LTR/ERVL-MaLR	1	405	(3)	4564477
280	18.6	0.0	6.3	chrX	149327872	149327934	(6712961)	C	MER96	DNA/hAT-Tip100	(116)	59	1	4564478
2912	16.5	2.6	0.2	chrX	150482029	150482544	(5558351)	+	L1MB3	LINE/L1	5653	6181	(2)	4565952
305	30.9	8.2	1.6	chrX	150482545	150482566	(5558329)	+	L1MEg	LINE/L1	1945	1967	(4117)	4565951
227	20.9	19.5	0.0	chrX	150947040	150947130	(5093765)	+	MamTip2	DNA/hAT-Tip100	116	228	(77)	4566788
1250	24.4	12.0	3.1	chrX	150947407	150947821	(5093074)	C	MLT1D	LTR/ERVL-MaLR	(9)	496	40	4566789
332	23.7	11.1	1.8	chrX	153214565	153214727	(2826168)	C	MLT1H	LTR/ERVL-MaLR	(370)	185	5	4569978
1819	26.8	6.0	2.4	chrX	153214948	153215456	(2825439)	+	MLT1F2	LTR/ERVL-MaLR	30	558	(2)	4569979
21	16.9	8.6	4.0	chrX	154458289	154458401	(1582494)	+	(GGCGGC)n	Simple_repeat	1	118	(0)	4571897
2084	12.5	2.8	0.0	chrX	155307604	155307884	(733011)	+	AluSx1	SINE/Alu	2	290	(22)	4573193
7483	11.4	3.7	0.2	chrX	155307926	155309124	(731771)	+	L1M1	LINE/L1	1983	3225	(4340)	4573194
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057