3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
49	0.0	0.0	0.0	chr1	61043830	61043871	(187912551)	+	(AC)n	Simple_repeat	1	42	(0)	117576
6369	15.7	4.1	2.7	chr1	68595915	68597069	(180359353)	+	Tigger1	DNA/TcMar-Tigger	1	1172	(1246)	130870
6829	15.2	1.2	0.2	chr1	68597076	68598176	(180358246)	+	Tigger1	DNA/TcMar-Tigger	1306	2417	(1)	130871
1972	13.4	6.4	2.0	chr1	75887099	75887455	(173068967)	+	THE1D	LTR/ERVL-MaLR	8	381	(0)	140597
469	28.6	8.8	0.0	chr1	75887565	75887717	(173068705)	C	MIR	SINE/MIR	(75)	187	23	140598
6344	18.1	2.4	0.7	chr1	77441049	77442758	(171513664)	C	L1M2a	LINE/L1	(4847)	2321	5	142876
808	15.4	8.1	1.6	chr1	92388060	92388259	(156568163)	+	L1MB8	LINE/L1	4259	4472	(1674)	164372
898	13.8	0.8	0.0	chr1	92388260	92388389	(156568033)	+	AluJo	SINE/Alu	1	131	(181)	164373
811	16.8	7.2	3.9	chr1	92388390	92388414	(156568008)	+	L1MB8	LINE/L1	4474	4498	(1648)	164372
23393	8.0	1.5	0.3	chr1	92388403	92394485	(156561937)	+	L1PA7	LINE/L1	9	6152	(2)	164374
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
12	20.4	2.4	2.4	chr1	151071222	151071262	(97885160)	+	G-rich	Low_complexity	1	42	(0)	220420
18912	8.9	1.9	1.9	chr1	156185008	156187410	(92769012)	C	HERVK22-int	LTR/ERVK	(1758)	5079	417	229663
2291	30.5	5.0	3.8	chr1	159527269	159529144	(89427278)	C	L1PB4	LINE/L1	(4514)	3052	1419	234403
326	35.2	3.4	0.7	chr1	159529285	159529427	(89426995)	C	L1PB4	LINE/L1	(6019)	1566	1420	234403
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
1644	16.1	1.5	6.4	chr1	175112340	175112598	(73843824)	C	L1PB3	LINE/L1	(3706)	3458	3211	258229
1988	14.0	0.3	1.8	chr1	175112599	175112921	(73843501)	C	AluSz	SINE/Alu	(0)	312	1	258235
20010	10.4	1.6	0.7	chr1	185581525	185584696	(63371726)	C	HERVK22-int	LTR/ERVK	(0)	6837	2327	274474
1306	14.0	0.0	7.4	chr1	186402405	186402625	(62553797)	C	AluJo	SINE/Alu	(22)	290	86	275540
616	24.0	2.3	0.0	chr1	186402635	186402759	(62553663)	C	AluJo	SINE/Alu	(56)	256	129	275542
568	20.2	11.3	0.8	chr1	186402763	186402881	(62553541)	C	AluJr4	SINE/Alu	(179)	133	1	275543
378	32.5	5.5	0.0	chr1	186402885	186403004	(62553418)	+	MIRb	SINE/MIR	131	257	(11)	275534
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
33589	8.9	1.1	0.2	chr1	225223325	225226602	(23729820)	+	HERVK22-int	LTR/ERVK	2314	5631	(1206)	333685
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
278	32.7	5.2	8.0	chr1	232436184	232436459	(16519963)	C	L2a	LINE/L2	(1)	3425	3158	344951
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
343	36.1	9.5	3.3	chr1	243663066	243663340	(5293082)	C	L2c	LINE/L2	(0)	3387	3094	362887
16	16.5	3.9	3.8	chr1	243663430	243663480	(5292942)	+	GA-rich	Low_complexity	1	53	(0)	362888
200	28.2	3.7	2.8	chr1	243979767	243979872	(4976550)	C	L2a	LINE/L2	(54)	3372	3266	363402
201	33.3	7.4	1.4	chr1	244214224	244214363	(4742059)	C	MamRTE1	LINE/RTE-BovB	(3533)	279	131	363748
2159	23.7	2.9	8.5	chr10	5232121	5232706	(128564716)	+	MLT2B3	LTR/ERVL	1	552	(2)	377440
342	31.7	11.5	3.7	chr10	77672899	77673114	(56124308)	+	MIRb	SINE/MIR	15	249	(19)	486375
288	34.5	13.6	2.5	chr10	78306603	78307089	(55490333)	C	L2	LINE/L2	(617)	2802	2253	487577
803	29.1	2.7	11.8	chr10	96439791	96440164	(37357258)	+	MER102b	DNA/hAT-Charlie	1	339	(2)	515961
353	28.3	2.4	3.2	chr10	96440214	96440337	(37357085)	+	L2a	LINE/L2	3304	3426	(0)	515962
1799	16.4	1.4	2.3	chr10	107047800	107048098	(26749324)	+	AluJb	SINE/Alu	2	297	(15)	534704
14	11.0	0.0	6.1	chr10	118209567	118209599	(15587823)	+	(TTTA)n	Simple_repeat	1	33	(0)	551709
335	35.6	1.9	2.4	chr10	119715545	119715727	(14081695)	C	MIRb	SINE/MIR	(27)	241	52	554448
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
17	0.0	0.0	0.0	chr11	66142623	66142641	(68943981)	+	(A)n	Simple_repeat	1	19	(0)	668918
2141	14.1	0.0	0.0	chr11	66143641	66143939	(68942683)	C	AluSz6	SINE/Alu	(13)	299	1	668919
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
50354	9.2	0.7	0.4	chr11	81033116	81039929	(54046693)	+	HERVK22-int	LTR/ERVK	1	6837	(0)	696796
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
45476	7.8	0.6	0.4	chr11	95934030	95938646	(39147976)	+	HERVK22-int	LTR/ERVK	1	4644	(2193)	719354
40	4.9	0.0	0.0	chr11	102317589	102317631	(32768991)	+	(GT)n	Simple_repeat	1	43	(0)	727750
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
356	32.0	4.9	8.3	chr12	2768157	2768397	(130506912)	+	L2c	LINE/L2	3071	3307	(80)	782615
200	13.2	2.6	2.6	chr12	2768385	2768423	(130506886)	+	L2c	LINE/L2	3269	3307	(80)	782616
189	15.8	2.6	2.6	chr12	2768432	2768470	(130506839)	+	L2c	LINE/L2	3269	3307	(80)	782616
270	25.4	2.6	10.2	chr12	2768479	2768605	(130506704)	+	L2c	LINE/L2	3269	3385	(2)	782617
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
21177	10.2	1.6	1.9	chr12	42443566	42446699	(90828610)	+	HERVK22-int	LTR/ERVK	2403	6833	(4)	836642
22485	9.2	1.2	0.3	chr12	43976748	43979921	(89295388)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2314	838847
22585	9.7	0.4	0.5	chr12	88180078	88183278	(45092031)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2314	905177
1230	16.2	8.9	10.8	chr12	95613443	95613739	(37661570)	+	AluJb	SINE/Alu	3	293	(19)	917576
5799	9.3	1.9	0.8	chr12	100162987	100163231	(33112078)	C	HERVK22-int	LTR/ERVK	(3356)	3481	3242	924999
27	0.0	0.0	0.0	chr12	100163232	100163257	(33112052)	+	(T)n	Simple_repeat	1	26	(0)	925000
5799	9.3	1.9	0.8	chr12	100163258	100163811	(33111498)	C	HERVK22-int	LTR/ERVK	(3596)	3241	2674	924999
2216	29.8	3.5	2.8	chr12	115922350	115923027	(17352282)	+	ERVL-E-int	LTR/ERVL	4969	5661	(6)	957093
2388	19.2	11.2	1.4	chr12	115923036	115923615	(17351694)	+	LTR41	LTR/ERVL	9	652	(116)	957093
397	28.7	1.0	0.5	chr12	124438671	124439853	(8835456)	+	GA-rich	Low_complexity	1	1195	(0)	976059
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
134	1.9	3.0	2.3	chr12	127166172	127166337	(6108972)	+	(CCGAGGCCGA)n	Simple_repeat	1	171	(0)	981019
1361	27.9	5.4	0.5	chr13	61846022	61846389	(52517939)	C	MLT1E1A	LTR/ERVL-MaLR	(9)	671	285	1055270
348	23.7	14.5	1.7	chr13	61846415	61846534	(52517794)	C	MLT1E1A	LTR/ERVL-MaLR	(515)	138	1	1055270
4868	17.1	8.5	1.8	chr13	62099586	62100493	(52263835)	+	LTR1D	LTR/ERV1	1	975	(0)	1055583
2730	21.3	7.0	1.0	chr13	62137461	62138400	(52225928)	+	LTR28C	LTR/ERV1	1	1067	(62)	1055624
17442	17.3	1.9	3.8	chr13	62508644	62513010	(51851318)	C	L1PA16	LINE/L1	(1686)	4797	551	1056092
1853	30.6	6.8	0.2	chr13	63463741	63464359	(50899969)	+	L1M3a	LINE/L1	15	677	(5278)	1057311
2168	28.2	6.0	1.3	chr13	63464363	63465079	(50899249)	+	L1M3a	LINE/L1	1360	2112	(4976)	1057312
347	36.9	0.5	2.5	chr13	63811934	63812133	(50552195)	+	L2	LINE/L2	2143	2338	(1081)	1057759
8308	14.8	2.3	1.3	chr13	64784386	64786560	(49577768)	+	L1PB3	LINE/L1	3825	6026	(128)	1058984
2958	17.1	1.5	5.6	chr13	64786561	64787198	(49577130)	C	LTR9	LTR/ERV1	(1)	611	1	1058985
6689	17.5	9.5	1.6	chr13	64924437	64926085	(49438243)	C	MER52D	LTR/ERV1	(0)	2123	1	1059142
265	21.1	0.0	1.7	chr13	65149612	65149669	(49214659)	+	MLT1B	LTR/ERVL-MaLR	1	57	(333)	1059402
2128	11.5	7.7	0.2	chr13	65149669	65150113	(49214215)	C	LTR12C	LTR/ERV1	(1096)	483	3	1059403
274	34.1	5.7	3.5	chr13	66260014	66260117	(48104211)	C	MIRc	SINE/MIR	(90)	178	77	1060806
4504	15.3	6.6	0.7	chr13	66260118	66260888	(48103440)	C	LTR1B	LTR/ERV1	(0)	824	5	1060807
274	34.1	5.7	3.5	chr13	66260889	66260956	(48103372)	C	MIRc	SINE/MIR	(192)	76	2	1060806
1926	21.6	3.9	1.6	chr13	67912018	67914966	(46449362)	C	SATR2	Satellite	(168)	2609	1	1062863
1516	21.3	8.9	3.6	chr13	67915011	67915889	(46448439)	C	SATR1	Satellite	(65)	911	1	1062864
20937	11.4	1.0	0.3	chr13	71026751	71029904	(43334424)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2333	1066932
448	25.5	6.2	2.2	chr13	75122136	75122295	(39242033)	+	L1ME3A	LINE/L1	1471	1593	(5957)	1072868
1127	26.6	3.3	1.0	chr13	75122354	75122646	(39241682)	+	LTR16B1	LTR/ERVL	181	480	(0)	1072869
5815	23.4	3.6	2.0	chr13	76543487	76544915	(37819413)	+	L1M4b	LINE/L1	308	1760	(5107)	1074881
307	31.2	2.6	8.2	chr13	76857864	76858107	(37506221)	+	L2	LINE/L2	1849	2078	(1341)	1075343
357	29.6	2.6	5.0	chr13	76858225	76858384	(37505944)	+	MLT1L	LTR/ERVL-MaLR	90	245	(365)	1075344
434	19.8	9.7	0.0	chr13	76858535	76858655	(37505673)	+	MLT1L	LTR/ERVL-MaLR	476	609	(1)	1075345
1632	18.3	0.3	5.0	chr13	78718422	78718721	(35645607)	C	AluJb	SINE/Alu	(26)	286	1	1077932
2503	15.9	1.0	14.1	chr13	79558967	79559560	(34804768)	C	MLT2B2	LTR/ERVL	(0)	515	1	1079131
7725	16.8	1.9	1.7	chr13	84927204	84928690	(29435638)	+	L1P3b	LINE/L1	1122	2619	(4362)	1085866
990	15.9	3.6	1.1	chr13	86791888	86792078	(27572250)	C	MSTB	LTR/ERVL-MaLR	(0)	428	233	1088168
6100	12.6	15.2	3.2	chr13	86792082	86793348	(27570980)	+	LTR12C	LTR/ERV1	3	1434	(145)	1088169
3407	26.8	4.5	4.1	chr13	90048163	90049293	(24315035)	C	L1M1	LINE/L1	(5741)	1824	14	1092439
22091	9.8	1.3	0.8	chr13	102668346	102671524	(11692804)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2314	1111106
184	30.6	4.6	0.0	chr14	18668138	18668199	(88375519)	+	L2b	LINE/L2	3309	3373	(2)	1126017
2176	4.0	0.0	0.0	chr14	19668195	19668466	(87375252)	+	L1PA6	LINE/L1	5515	5786	(368)	1127019
16	28.9	0.0	3.2	chr14	19668474	19668535	(87375183)	+	(GCG)n	Simple_repeat	1	62	(0)	1127020
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
625	22.0	3.4	2.1	chr14	69299151	69299294	(37744424)	+	L2	LINE/L2	1853	1998	(1421)	1199255
547	28.1	5.3	0.0	chr14	69299342	69299519	(37744199)	C	LTR16	LTR/ERVL	(2)	436	249	1199256
310	28.5	15.0	3.2	chr14	69299543	69299745	(37743973)	C	MIRb	SINE/MIR	(35)	233	2	1199257
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
14	3.6	6.7	3.1	chr14	101796611	101796650	(5247068)	+	(CAGCC)n	Simple_repeat	1	41	(0)	1253662
18	30.9	2.7	1.3	chr15	20294929	20295001	(81696188)	+	(CG)n	Simple_repeat	1	75	(0)	1263128
22	12.8	0.0	0.0	chr15	20295410	20295443	(81695746)	+	(GT)n	Simple_repeat	1	34	(0)	1263129
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
13029	9.9	0.5	1.4	chr15	39013656	39015215	(62975974)	+	HERVK22-int	LTR/ERVK	2327	3878	(2959)	1289136
36004	9.8	0.6	0.5	chr15	49839371	49844484	(52146705)	+	HERVK22-int	LTR/ERVK	341	5458	(1379)	1306734
230	20.1	1.9	6.1	chr15	67106836	67106907	(34884282)	C	UCON132b	DNA/hAT-Tip100	(1)	147	89	1336085
269	23.4	2.9	3.0	chr15	67107067	67107155	(34884034)	+	L2a	LINE/L2	3290	3425	(1)	1336086
1394	22.0	8.7	3.9	chr15	81118757	81119429	(20871760)	C	MER101-int	LTR/ERV1	(1299)	5032	3925	1360747
242	22.2	3.6	0.0	chr15	89913142	89913195	(12077994)	C	L4_A_Mam	LINE/RTE-X	(929)	4061	4006	1375133
17	24.5	0.0	7.7	chr16	914760	914837	(89423508)	+	(TCCC)n	Simple_repeat	1	78	(0)	1395327
464	31.2	4.2	0.5	chr16	1025755	1025960	(89312385)	C	MER2	DNA/TcMar-Tigger	(130)	215	2	1395420
198	25.0	6.4	7.4	chr16	1092180	1092274	(89246071)	+	L2b	LINE/L2	3263	3356	(19)	1395493
1232	10.0	0.6	1.2	chr16	1871726	1871895	(88466450)	+	AluSx3	SINE/Alu	49	217	(94)	1396539
525	29.7	2.1	4.2	chr16	6145888	6146080	(84192265)	C	MamSINE1	SINE/tRNA-RTE	(47)	243	55	1404740
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
11450	7.3	1.6	0.8	chr16	31763078	31764604	(58573741)	C	HERVK22-int	LTR/ERVK	(2135)	4702	3165	1460768
3610	4.1	0.3	0.1	chr16	31764605	31765126	(58573219)	+	L1P1	LINE/L1	4954	5479	(823)	1460769
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
338	23.5	2.9	0.0	chr16	34063160	34063227	(56275118)	+	AluYh9	SINE/Alu	224	293	(18)	1463560
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
32	8.3	1.1	6.7	chr16	34919417	34919504	(55418841)	+	(GATTCCATTC)n	Simple_repeat	1	89	(0)	1464244
26	6.4	5.6	4.0	chr16	34951478	34951548	(55386797)	+	(GATTCCATTC)n	Simple_repeat	1	75	(0)	1464279
38	0.0	0.0	0.0	chr16	51982398	51982430	(38355915)	+	(AC)n	Simple_repeat	1	33	(0)	1475295
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
14	4.9	0.0	0.0	chr17	21843039	21843059	(61414382)	+	(GCC)n	Simple_repeat	1	21	(0)	1584858
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
377	19.1	1.6	0.0	chr17	26939822	26939884	(56317557)	+	AluYj4	SINE/Alu	224	287	(24)	1585997
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
293	23.4	5.0	2.1	chr17	41987431	41987526	(41269915)	C	L2a	LINE/L2	(0)	3426	3328	1614719
507	30.4	9.2	1.0	chr17	41987528	41987736	(41269705)	+	Plat_L3	LINE/CR1	3331	3558	(28)	1614720
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
2387	18.2	5.9	3.8	chr17	45577514	45577701	(37679740)	+	L1MB7	LINE/L1	5594	5777	(407)	1622320
653	16.3	0.8	6.7	chr17	45577702	45577836	(37679605)	+	FLAM_A	SINE/Alu	2	128	(14)	1622321
2387	18.2	5.9	3.8	chr17	45577837	45578225	(37679216)	+	L1MB7	LINE/L1	5778	6184	(0)	1622320
6706	5.1	1.4	0.9	chr17	46534195	46535048	(36722393)	C	SVA_C	Retroposon/SVA	(0)	1384	527	1624266
290	33.3	4.0	2.4	chr17	49443452	49443574	(33813867)	+	L2b	LINE/L2	3043	3167	(208)	1629956
2763	19.8	0.0	2.6	chr17	52833069	52833567	(30423874)	+	L1M1	LINE/L1	1003	1488	(6077)	1635931
1240	27.2	8.1	2.4	chr17	72704723	72705177	(10552264)	+	MLT1K	LTR/ERVL-MaLR	90	572	(23)	1670858
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
167	14.0	0.3	2.0	chr17	83247136	83247436	(10005)	+	(GTTAGG)n	Simple_repeat	1	302	(0)	1688733
9408	16.6	6.0	1.2	chr18	62721	63620	(80309665)	C	L1MA2	LINE/L1	(5003)	2562	1591	1689112
319	11.7	0.3	4.0	chr18	63621	64200	(80309085)	+	(CCCTAA)n	Simple_repeat	1	582	(0)	1689118
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2040	14.8	2.5	1.7	chr18	29752514	29752871	(50620414)	C	THE1B	LTR/ERVL-MaLR	(0)	364	4	1725437
770	19.5	0.5	13.2	chr18	29752872	29753025	(50620260)	+	MLT2A1	LTR/ERVL	48	186	(258)	1725436
767	18.3	5.4	3.9	chr18	29753184	29753365	(50619920)	+	MLT2A1	LTR/ERVL	224	408	(193)	1725436
232	32.1	6.7	5.9	chr18	34565241	34565359	(45807926)	C	L2c	LINE/L2	(18)	3369	3250	1732114
1078	27.4	5.6	3.0	chr18	34565418	34565820	(45807465)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	54	1732115
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
6379	9.2	2.1	0.6	chr19	90028	91129	(58526487)	+	L1PA14	LINE/L1	5047	6161	(0)	1796392
12536	14.0	0.7	0.6	chr19	27747412	27749130	(30868486)	+	HERVK22-int	LTR/ERVK	2327	4057	(2780)	1847873
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
2577	6.6	0.0	0.0	chr19	47831027	47831330	(10786286)	+	AluSg	SINE/Alu	1	304	(6)	1887187
407	27.1	0.0	9.2	chr19	47831331	47831365	(10786251)	C	LTR37B	LTR/ERV1	(323)	145	112	1887183
1417	15.6	21.7	0.4	chr19	47831366	47831629	(10785987)	+	MER1B	DNA/hAT-Charlie	4	339	(0)	1887188
407	27.1	0.0	9.2	chr19	47831630	47831735	(10785881)	C	LTR37B	LTR/ERV1	(357)	111	17	1887183
14	21.7	0.0	10.3	chr19	48646681	48646758	(9970858)	+	(GGAGCG)n	Simple_repeat	1	78	(0)	1889273
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
6188	4.4	0.3	0.0	chr2	32879704	32880448	(209313081)	+	L1PA5	LINE/L1	5401	6147	(7)	1961118
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
15607	8.9	0.8	0.6	chr2	56982088	56984202	(185209327)	C	HERVK22-int	LTR/ERVK	(2403)	4434	2314	1998050
48501	9.4	2.1	0.3	chr2	71388647	71395356	(170798173)	+	HERVK22-int	LTR/ERVK	3	6837	(0)	2020596
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
36645	7.8	1.2	0.1	chr2	127370373	127375395	(114818134)	+	HERVK22-int	LTR/ERVK	1	5078	(1759)	2097328
390	23.1	12.8	3.4	chr2	158573694	158573841	(83619688)	C	LTR16A	LTR/ERVL	(32)	419	256	2140294
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
53590	7.6	0.9	0.4	chr2	170112491	170119294	(72074235)	+	HERVK22-int	LTR/ERVK	1	6837	(0)	2156169
31719	10.8	0.5	0.2	chr2	172514937	172519268	(69674261)	+	HERVK22-int	LTR/ERVK	2493	6837	(0)	2160279
16	0.0	0.0	0.0	chr2	200954884	200954904	(41238625)	+	(GAAT)n	Simple_repeat	1	21	(0)	2199216
38	0.0	0.0	0.0	chr2	200954905	200954939	(41238590)	+	(AATA)n	Simple_repeat	1	35	(0)	2199217
430	27.9	3.7	4.7	chr2	200954943	200955134	(41238395)	+	Charlie17a	DNA/hAT-Charlie	28	217	(0)	2199218
35	0.0	0.0	0.0	chr2	217858672	217858701	(24334828)	+	(AC)n	Simple_repeat	1	30	(0)	2225056
14	12.7	2.6	5.1	chr2	217858706	217858743	(24334786)	+	(CTCC)n	Simple_repeat	1	39	(0)	2225057
53	20.0	0.7	5.2	chr2	217858927	217858942	(24334587)	+	(CCAGC)n	Simple_repeat	1	16	(0)	2225058
38	2.4	2.3	0.0	chr2	217858943	217858985	(24334544)	+	(CCAGCC)n	Simple_repeat	1	44	(0)	2225059
53	20.0	0.7	5.2	chr2	217858986	217859122	(24334407)	+	(CCAGC)n	Simple_repeat	2	131	(0)	2225060
20	11.0	2.4	2.4	chr2	222174383	222174423	(20019106)	+	(TTG)n	Simple_repeat	1	42	(0)	2232225
20919	7.9	0.9	1.4	chr2	231093121	231096070	(11097459)	C	HERVK22-int	LTR/ERVK	(1587)	5250	2314	2246220
3381	13.1	3.5	0.0	chr2	237930215	237930770	(4262759)	+	LTR27C	LTR/ERV1	9	584	(183)	2257074
701	28.4	4.1	5.2	chr2	237930840	237931110	(4262419)	C	MLT1F2	LTR/ERVL-MaLR	(249)	311	44	2257073
1966	23.1	0.2	0.1	chr20	63841	67292	(64376875)	+	(ATTCC)n	Simple_repeat	2	3456	(0)	2262202
22661	8.4	2.1	0.2	chr20	468331	471446	(63972721)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2332	2263009
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
8063	19.7	6.6	2.5	chr20	28565013	28565466	(35878701)	C	LTR53-int	LTR/ERVL	(1471)	1858	1390	2303595
1942	20.6	9.7	0.9	chr20	28565467	28565898	(35878269)	C	MLT2B1	LTR/ERVL	(46)	474	1	2303597
2077	8.7	0.7	7.7	chr20	29377981	29378290	(35065877)	C	AluSg7	SINE/Alu	(20)	289	2	2304056
1841	16.8	4.5	5.5	chr20	29378291	29378612	(35065555)	C	THE1C	LTR/ERVL-MaLR	(49)	326	1	2304055
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
4070	20.9	7.5	2.8	chr20	29428506	29430401	(35013766)	+	L1MA9	LINE/L1	4249	6312	(0)	2304112
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
693	10.2	2.5	2.5	chr20	30816154	30816274	(33627893)	C	5S	rRNA	(0)	121	1	2305477
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
2711	10.7	8.2	0.0	chr20	64120742	64121134	(323033)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2370519
206	25.8	8.2	2.2	chr20	64121135	64121201	(322966)	C	L2c	LINE/L2	(63)	3324	3250	2370518
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
1247	22.8	0.6	0.2	chr21	8232546	8235312	(38474671)	+	(TCTC)n	Simple_repeat	1	2784	(0)	2373335
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
3424	19.3	3.5	9.5	chr21	9143369	9144153	(37565830)	C	LTR49-int	LTR/ERV1	(1013)	5318	4572	2374278
1738	18.7	0.7	1.0	chr21	9144154	9144447	(37565536)	C	AluJb	SINE/Alu	(18)	294	2	2374279
3424	21.2	4.9	9.9	chr21	9144448	9144867	(37565116)	C	LTR49-int	LTR/ERV1	(1760)	4571	4283	2374278
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
627	27.0	2.1	1.6	chr21	9257721	9257908	(37452075)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2374356
2761	17.5	4.4	0.8	chr21	9317965	9318489	(37391494)	+	MER52A	LTR/ERV1	1211	1755	(0)	2374416
8987	11.4	0.1	1.4	chr21	9318490	9319139	(37390844)	C	L1MA3	LINE/L1	(297)	6008	5360	2374417
6617	21.7	6.3	7.6	chr21	9528249	9530892	(37179091)	+	REP522	Satellite/telo	1	2611	(1251)	2374489
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
41	2.5	0.0	0.0	chr21	9820677	9820716	(36889267)	+	(AC)n	Simple_repeat	1	40	(0)	2374901
1751	29.7	4.9	6.1	chr21	9820724	9822018	(36887965)	C	SST1	Satellite/centr	(1)	1562	284	2374902
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1930	29.2	5.4	6.1	chr21	9823541	9824851	(36885132)	C	SST1	Satellite/centr	(1)	1562	262	2374908
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
471	27.5	6.0	1.2	chr21	10330456	10330628	(36379355)	C	ERVL-E-int	LTR/ERVL	(648)	5019	4838	2375365
5929	13.6	4.5	2.0	chr21	10363290	10364171	(36345812)	C	L1MA2	LINE/L1	(1820)	4326	3409	2375401
1676	16.4	2.0	3.7	chr21	10415954	10416252	(36293731)	+	AluJb	SINE/Alu	1	294	(18)	2375512
398	8.6	0.2	0.0	chr21	10426491	10427038	(36282945)	+	(GTGGTG)n	Simple_repeat	1	549	(0)	2375540
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
2093	14.3	0.0	0.3	chr21	10432014	10432313	(36277670)	C	AluSx	SINE/Alu	(13)	299	1	2375552
1894	12.1	1.5	0.7	chr21	10432387	10432659	(36277324)	C	AluSx1	SINE/Alu	(37)	275	1	2375553
2423	29.9	8.6	4.3	chr21	10439733	10439929	(36270054)	C	L1MDa	LINE/L1	(5195)	1438	1228	2375564
2178	12.2	0.3	0.0	chr21	10439930	10440225	(36269758)	C	AluSz	SINE/Alu	(14)	298	2	2375566
1447	18.1	2.8	1.9	chr21	32429722	32430042	(14279941)	C	MER33	DNA/hAT-Charlie	(0)	324	1	2403183
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
850	26.0	16.6	1.2	chr22	10731601	10732083	(40086385)	+	L2a	LINE/L2	2767	3340	(86)	2424554
1643	18.9	0.4	0.7	chr22	10953348	10953627	(39864841)	+	AluJr	SINE/Alu	18	296	(16)	2424736
15	15.3	0.0	0.0	chr22	11042347	11042375	(39776093)	+	GA-rich	Low_complexity	1	29	(0)	2424821
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
2046	15.2	0.0	0.0	chr22	11877779	11878081	(38940387)	C	AluSx	SINE/Alu	(4)	308	6	2425483
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
3058	20.8	2.7	1.3	chr22	11900876	11902001	(38916467)	C	L1MA5	LINE/L1	(354)	5946	4805	2425510
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
24888	7.0	0.5	0.1	chr22	12031367	12037491	(38780977)	C	L1PA4	LINE/L1	(3)	6325	176	2425613
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
194	23.1	0.0	1.9	chr22	12174483	12174535	(38643933)	+	MER5A	DNA/hAT-Charlie	118	169	(20)	2425783
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2049	19.3	12.2	3.0	chr22	34342355	34342857	(16475611)	+	MLT2B4	LTR/ERVL	1	556	(0)	2460868
15	24.2	1.8	3.5	chr22	39547095	39547151	(11271317)	+	GA-rich	Low_complexity	1	58	(0)	2471870
263	31.3	5.0	2.9	chr22	50514409	50514546	(303922)	C	L2	LINE/L2	(929)	2490	2350	2490799
282	18.9	14.6	13.3	chr3	32166946	32167073	(166128486)	+	MER5A	DNA/hAT-Charlie	9	138	(51)	2543345
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
1004	27.0	2.6	3.5	chr3	75717901	75718215	(122577344)	C	LTR16C	LTR/ERVL	(1)	488	177	2614614
2181	15.4	2.1	0.3	chr3	75718560	75718892	(122576667)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2614615
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2633	17.9	10.1	6.6	chr3	142809002	142809639	(55485920)	C	MLT2F	LTR/ERVL	(0)	663	1	2704734
30940	10.0	1.0	0.1	chr3	164216086	164220323	(34075236)	C	HERVK22-int	LTR/ERVK	(0)	6837	2562	2734648
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
2364	19.6	5.0	4.4	chr4	49493900	49494948	(140719607)	+	L1MB8	LINE/L1	4777	5836	(342)	2865154
2241	13.0	7.3	0.5	chr4	49494958	49495361	(140719194)	+	MER61C	LTR/ERV1	11	428	(0)	2865155
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
277	19.6	1.8	0.0	chr4	49576829	49576884	(140637671)	+	THE1D-int	LTR/ERVL-MaLR	959	1015	(616)	2865280
931	20.6	15.2	2.6	chr4	49576883	49577116	(140637439)	C	THE1D-int	LTR/ERVL-MaLR	(408)	1223	955	2865281
513	28.1	5.1	2.4	chr4	49577139	49577352	(140637203)	+	MSTA	LTR/ERVL-MaLR	98	310	(71)	2865279
285	26.1	0.0	1.8	chr4	49577533	49577634	(140636921)	C	HSAT5	Satellite	(1)	100	1	2865283
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
15849	11.5	0.2	0.9	chr4	71806668	71808953	(118405602)	C	HERVK22-int	LTR/ERVK	(2321)	4516	2248	2892683
21945	9.5	1.9	0.1	chr4	106111052	106114188	(84100367)	+	HERVK22-int	LTR/ERVK	2314	6837	(0)	2940386
2104	19.3	10.6	5.8	chr4	124072346	124072505	(66142050)	+	L1MB2	LINE/L1	2973	3224	(3776)	2964855
22760	11.5	0.6	0.9	chr4	124072505	124078721	(66135834)	+	L1PA8A	LINE/L1	2	6419	(27)	2964858
34553	8.1	0.5	0.2	chr4	158294030	158298524	(31916031)	+	HERVK22-int	LTR/ERVK	2314	6824	(13)	3011191
28639	0.6	0.0	0.0	chr4	166569977	166576007	(23638548)	+	L1HS	LINE/L1	124	6155	(0)	3022531
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
23124	11.8	1.4	0.0	chr4	190108264	190111540	(103015)	C	HERVK-int	LTR/ERVK	(1208)	6328	3007	3054628
261	23.3	0.0	0.0	chr4	190111624	190111683	(102872)	C	HERVK-int	LTR/ERVK	(6716)	718	659	3054629
1729	17.1	1.4	0.3	chr4	190111667	190111959	(102596)	C	HERVK-int	LTR/ERVK	(6840)	696	401	3054629
1218	8.2	0.0	0.0	chr4	190111960	190112106	(102449)	+	AluYh3	SINE/Alu	136	282	(29)	3054630
2323	14.2	5.5	0.5	chr4	190112160	190112541	(102014)	C	HERVK-int	LTR/ERVK	(7134)	402	1	3054629
7805	8.0	0.5	1.3	chr4	190112542	190113546	(101009)	C	LTR5B	LTR/ERVK	(0)	1002	6	3054629
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
949	27.2	5.1	4.2	chr5	3659659	3659988	(177878271)	C	L1MD2	LINE/L1	(7)	6352	6020	3058563
1059	26.2	3.1	1.7	chr5	3660215	3660501	(177877758)	C	L1MD1	LINE/L1	(168)	6074	5784	3058564
273	29.6	8.1	1.6	chr5	78985584	78985710	(102552549)	C	MIRc	SINE/MIR	(25)	243	108	3158886
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
1516	18.5	15.6	6.1	chr5	144743074	144743401	(36794858)	+	L1PA15-16	LINE/L1	1	375	(6478)	3249689
2991	1.6	0.0	0.0	chr5	144743402	144743719	(36794540)	C	AluYb8	SINE/Alu	(0)	318	1	3249690
436	25.0	0.9	1.7	chr5	174327861	174327978	(7210281)	+	MIRb	SINE/MIR	35	151	(117)	3301294
2989	27.2	4.0	1.5	chr5	180924375	180926021	(612238)	+	L1M3b	LINE/L1	2033	3399	(4166)	3313436
49621	8.8	1.0	0.4	chr6	23161418	23168212	(147637767)	+	HERVK22-int	LTR/ERVK	1	6837	(0)	3350184
21358	9.9	0.5	0.3	chr6	49887041	49890249	(120915730)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2294	3395008
50200	8.8	1.6	0.5	chr6	78133560	78140229	(92665750)	+	HERVK22-int	LTR/ERVK	100	6837	(0)	3429612
652	17.4	9.7	0.0	chr6	99746245	99746365	(71059614)	C	FLAM_C	SINE/Alu	(9)	134	1	3458083
37594	7.2	1.4	0.3	chr6	100946014	100950156	(69855823)	+	HERVK22-int	LTR/ERVK	700	4888	(1949)	3459691
1719	17.9	1.6	2.3	chr6	110938114	110938420	(59867559)	C	AluJr4	SINE/Alu	(7)	305	1	3474653
13	9.3	0.0	0.0	chr6	110938488	110938510	(59867469)	+	(TTTA)n	Simple_repeat	1	23	(0)	3474654
281	25.0	0.0	1.5	chr6	110938542	110938606	(59867373)	+	MLT1J	LTR/ERVL-MaLR	104	167	(345)	3474655
2137	11.7	0.7	1.3	chr6	110938630	110938936	(59867043)	C	AluSz	SINE/Alu	(7)	305	1	3474656
192	27.7	4.8	9.2	chr6	111380680	111380810	(59425169)	+	MER5A	DNA/hAT-Charlie	10	134	(55)	3475502
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
3336	14.3	3.4	0.2	chr6	141438868	141439379	(29366600)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3517273
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
14	5.0	0.0	0.0	chr6	147204595	147204615	(23601364)	+	(GCA)n	Simple_repeat	1	21	(0)	3525092
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
1307	30.6	13.4	5.2	chr6	168883498	168884610	(1921369)	+	Arthur1B	DNA/hAT-Tip100	3	1221	(4)	3555912
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
17	10.3	0.0	3.0	chr7	27127924	27127956	(132218017)	+	(CAAA)n	Simple_repeat	1	33	(0)	3598040
7337	11.1	0.8	1.2	chr7	48141269	48142304	(111203669)	+	HERVK22-int	LTR/ERVK	2328	3358	(3479)	3629535
12701	12.2	1.4	0.0	chr7	48142304	48144206	(111201767)	+	HERVK22-int	LTR/ERVK	3181	6828	(9)	3629535
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
33	0.0	0.0	0.0	chr7	87966722	87966752	(71379221)	+	(T)n	Simple_repeat	1	31	(0)	3687884
378	36.8	0.0	6.5	chr7	97797418	97797571	(61548402)	C	MamTip2	DNA/hAT-Tip100	(154)	151	8	3701294
204	30.9	11.3	6.2	chr7	102626677	102626717	(56719256)	+	L2b	LINE/L2	3141	3187	(188)	3711454
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
53334	7.1	0.8	0.1	chr7	118114571	118121364	(41224609)	+	HERVK22-int	LTR/ERVK	1	6837	(0)	3733470
5347	11.5	2.4	2.4	chr7	118394130	118394951	(40951022)	C	LTR1A2	LTR/ERV1	(9)	828	7	3733837
246	27.9	5.5	7.5	chr7	135939075	135939167	(23406806)	+	L2a	LINE/L2	3289	3379	(47)	3759852
265	17.6	10.8	3.9	chr7	135939377	135939453	(23406520)	+	LTR67B	LTR/ERVL	36	118	(502)	3759853
18	19.9	0.0	0.0	chr7	135939571	135939605	(23406368)	+	G-rich	Low_complexity	1	35	(0)	3759854
968	22.2	2.6	7.9	chr7	140420449	140420668	(18925305)	C	LTR16B	LTR/ERVL	(96)	367	154	3767397
301	23.9	0.0	0.0	chr7	140420776	140420842	(18925131)	C	L1ME3B	LINE/L1	(891)	5255	5189	3767393
1771	17.5	0.3	4.6	chr7	140420872	140420882	(18925091)	C	AluJo	SINE/Alu	(1)	311	302	3767399
2440	9.1	0.7	0.0	chr7	140420883	140421190	(18924783)	C	AluSx1	SINE/Alu	(2)	310	1	3767400
8728	18.1	2.7	0.6	chr7	144717027	144718642	(14627331)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	3773573
2429	14.9	4.2	1.7	chr7	148593818	148594166	(10751807)	+	MSTA	LTR/ERVL-MaLR	1	364	(64)	3779046
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
20580	12.6	1.5	0.4	chr8	5798976	5802204	(139336432)	C	HERVK22-int	LTR/ERVK	(1502)	5335	2248	3801113
9904	11.2	0.8	0.3	chr8	5854782	5856206	(139282430)	C	HERVK22-int	LTR/ERVK	(3082)	3755	2325	3801159
14338	9.1	0.8	0.2	chr8	9801086	9802982	(135335654)	+	HERVK22-int	LTR/ERVK	2314	4222	(2615)	3807067
2205	10.3	2.4	0.3	chr8	24708037	24708328	(120430308)	+	AluSq2	SINE/Alu	1	298	(15)	3829855
2145	9.8	6.6	5.1	chr8	24708329	24708626	(120430010)	C	THE1D	LTR/ERVL-MaLR	(60)	321	1	3829854
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
387	21.6	3.4	5.5	chr8	48051944	48052165	(97086471)	C	L1MEg	LINE/L1	(3948)	2589	2351	3862864
5057	12.1	0.5	6.8	chr8	49465210	49465868	(95672768)	+	LTR1A2	LTR/ERV1	233	837	(0)	3864463
13	9.3	0.0	0.0	chr8	49465882	49465904	(95672732)	+	(AACA)n	Simple_repeat	1	23	(0)	3864465
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
298	29.0	3.1	1.6	chr8	85659943	85660068	(59478568)	C	L1ME4b	LINE/L1	(0)	892	765	3914925
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
25392	9.5	1.4	0.3	chr8	88607961	88611671	(56526965)	C	HERVK22-int	LTR/ERVK	(757)	6080	2331	3918839
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
2479	7.5	0.0	0.3	chr9	16934455	16934759	(121459958)	C	AluY	SINE/Alu	(7)	304	1	4032638
2315	9.8	0.7	0.0	chr9	16934882	16935177	(121459540)	C	AluSc	SINE/Alu	(11)	298	1	4032639
1458	21.7	4.5	2.0	chr9	22901433	22901780	(115492937)	+	MLT1D	LTR/ERVL-MaLR	1	357	(148)	4041113
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
287	32.3	9.2	3.4	chr9	42388348	42388552	(96006165)	C	MIRb	SINE/MIR	(23)	245	28	4069999
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
1762	8.0	3.6	0.5	chr9	76571733	76572034	(61822683)	+	LSU-rRNA_Hsa	rRNA	4695	5034	(1)	4092814
1693	10.2	3.2	5.1	chr9	79883953	79884208	(58510509)	+	AluSc	SINE/Alu	52	302	(7)	4097879
19078	8.7	1.1	0.6	chr9	100364869	100367002	(38027715)	C	HERVK22-int	LTR/ERVK	(1769)	5068	2923	4129976
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
1857	22.8	10.4	2.2	chrX	20626744	20627067	(135413828)	C	MLT1H1	LTR/ERVL-MaLR	(193)	362	16	4393472
19	6.5	3.1	0.0	chrX	20627069	20627100	(135413795)	+	(AACAA)n	Simple_repeat	1	33	(0)	4393474
1134	28.8	9.5	1.5	chrX	20627111	20627583	(135413312)	+	L2a	LINE/L2	2910	3424	(2)	4393469
46332	10.4	1.8	0.5	chrX	25896369	25900469	(130140426)	+	HERVK22-int	LTR/ERVK	2496	6613	(224)	4401737
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
1818	16.4	0.0	0.0	chrX	49345995	49346281	(106694614)	C	AluSx	SINE/Alu	(25)	287	1	4437942
3790	13.0	1.8	0.2	chrX	63404074	63404629	(92636266)	C	MER61E	LTR/ERV1	(4)	565	1	4450136
2260	10.8	0.7	2.2	chrX	70122067	70122380	(85918515)	+	AluSq2	SINE/Alu	2	310	(3)	4459147
48	3.5	3.4	0.0	chrX	70122389	70122447	(85918448)	+	(CTCTCC)n	Simple_repeat	1	61	(0)	4459148
10304	4.1	0.7	8.0	chrX	70122448	70123902	(85916993)	+	SVA_B	Retroposon/SVA	35	1383	(0)	4459149
44420	7.7	1.1	1.0	chrX	73662049	73665711	(82375184)	C	HERVK22-int	LTR/ERVK	(3186)	3651	3	4464650
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
7054	23.3	2.5	0.9	chrX	76625018	76626907	(79413988)	+	L1PBa	LINE/L1	3	1640	(5223)	4467595
2364	26.3	9.3	6.4	chrX	104521552	104522247	(51518648)	C	L1MDa	LINE/L1	(4886)	1747	1017	4500330
26	0.0	0.0	0.0	chrX	104522248	104522272	(51518623)	+	(TATT)n	Simple_repeat	1	25	(0)	4500336
2364	26.3	9.3	6.4	chrX	104522273	104522644	(51518251)	C	L1MDa	LINE/L1	(5617)	1016	638	4500330
249	22.9	11.4	1.4	chrX	104522677	104522747	(51518148)	C	L1MDa	LINE/L1	(5909)	724	646	4500337
226	36.6	6.5	5.3	chrX	104522872	104523099	(51517796)	C	L1MDa	LINE/L1	(5909)	724	494	4500337
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
73	12.0	0.0	0.0	chrY	10973565	10973692	(46253723)	+	(TCCAT)n	Simple_repeat	1	128	(0)	4588565
258	28.4	0.0	0.0	chrY	10974044	10974110	(46253305)	C	AluJb	SINE/Alu	(11)	291	225	4588566
306	20.3	3.0	0.0	chrY	10986737	10986800	(46240615)	C	AluYj4	SINE/Alu	(22)	289	224	4588603
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
780	10.9	0.5	0.6	chrY	11181817	11186194	(46041221)	+	CER	Satellite	1	4374	(0)	4588950
741	17.6	1.4	0.7	chrY	11186186	11186322	(46041093)	+	MLT1A0	LTR/ERVL-MaLR	226	363	(2)	4588951
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
249	31.4	10.8	10.1	chrY	11287602	11287738	(45939677)	C	LTR48	LTR/ERV1	(13)	631	502	4589062
27	0.0	3.3	0.0	chrY	11287739	11287768	(45939647)	+	(AAAAC)n	Simple_repeat	1	31	(0)	4589063
307	25.3	11.2	7.7	chrY	11287769	11288013	(45939402)	C	LTR48	LTR/ERV1	(143)	501	189	4589062
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157