2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
2159	10.5	1.7	0.0	chr1	9266825	9267119	(239689303)	C	AluSx1	SINE/Alu	(12)	300	1	13270
475	32.8	15.4	0.0	chr1	12327041	12327244	(236629178)	C	MIR	SINE/MIR	(21)	241	1	19628
19	7.2	0.0	0.0	chr1	12327296	12327324	(236629098)	+	(TCCTC)n	Simple_repeat	1	29	(0)	19629
17	22.5	0.0	0.0	chr1	12327461	12327496	(236628926)	+	(C)n	Simple_repeat	1	36	(0)	19630
27645	16.0	2.8	3.2	chr1	12780115	12784947	(236171475)	C	HERVK-int	LTR/ERVK	(2720)	4816	3	20390
7601	8.7	1.6	0.0	chr1	12784950	12785935	(236170487)	C	LTR5B	LTR/ERVK	(0)	1002	1	20390
7746	8.5	1.1	0.0	chr1	13352736	13353726	(235602696)	+	LTR5B	LTR/ERVK	1	1002	(0)	21198
4505	15.1	2.3	0.7	chr1	13353727	13354460	(235601962)	+	HERVK-int	LTR/ERVK	1	746	(6790)	21198
21057	4.7	0.7	0.1	chr1	16105517	16108299	(232848123)	C	HERVK9-int	LTR/ERVK	(3223)	2798	1	26705
4364	5.7	0.0	0.0	chr1	16108300	16108812	(232847610)	C	MER9a2	LTR/ERVK	(0)	513	1	26705
520	31.4	3.1	5.5	chr1	17447942	17448045	(231508377)	C	MIRb	SINE/MIR	(19)	249	151	29406
2316	12.6	2.3	1.3	chr1	17448046	17448430	(231507992)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	1	29407
5268	20.9	1.1	0.5	chr1	19930517	19932159	(229024263)	C	HERVK14C-int	LTR/ERVK	(5653)	1781	1	34784
4063	8.5	1.5	2.0	chr1	19932160	19932710	(229023712)	C	LTR14	LTR/ERVK	(0)	548	1	34784
2210	10.7	1.4	0.0	chr1	27093791	27094081	(221862341)	C	AluSx1	SINE/Alu	(17)	295	1	50911
966	37.4	5.7	3.8	chr1	27094084	27094443	(221861979)	+	ERVL-E-int	LTR/ERVL	4537	4926	(728)	50901
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
6326	13.0	1.1	1.2	chr1	33063516	33064484	(215891938)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	64370
4544	9.3	2.8	0.2	chr1	33064485	33065110	(215891312)	+	HERVK-int	LTR/ERVK	1	643	(6893)	64370
1668	25.1	7.9	4.4	chr1	33457227	33457899	(215498523)	+	L2a	LINE/L2	2529	3215	(211)	65143
2575	12.4	2.5	0.8	chr1	39504134	39504532	(209451890)	C	LTR5B	LTR/ERVK	(0)	1002	597	76828
524	9.1	0.0	0.0	chr1	39504533	39504598	(209451824)	+	tRNA-Lys-AAG	tRNA	11	76	(0)	76829
6163	14.9	2.7	0.6	chr1	39504601	39505581	(209450841)	C	LTR5B	LTR/ERVK	(0)	1002	1	76830
1060	27.3	11.6	4.4	chr1	43494933	43495429	(205460993)	C	L2a	LINE/L2	(0)	3426	2891	84405
767	32.3	3.9	6.0	chr1	43495654	43496071	(205460351)	C	MamGypLTR3a	LTR/Gypsy	(526)	455	47	84406
15	14.6	6.0	3.8	chr1	46770479	46770528	(202185894)	+	(CCTCCTAC)n	Simple_repeat	1	53	(0)	90607
234	12.8	0.0	4.9	chr1	46770845	46770885	(202185537)	+	MER5B	DNA/hAT-Charlie	139	177	(1)	90608
13941	14.2	3.6	1.8	chr1	50872915	50873331	(198083091)	+	Tigger1	DNA/TcMar-Tigger	2001	2405	(13)	97555
1112	21.6	9.6	2.3	chr1	50873507	50873904	(198082518)	+	MER66A	LTR/ERV1	65	520	(34)	97559
1287	24.5	2.9	4.3	chr1	54957466	54957862	(193998560)	+	LTR10C	LTR/ERV1	188	562	(29)	106227
639	6.6	0.0	0.0	chr1	54957866	54957941	(193998481)	C	tRNA-Lys-AAG	tRNA	(0)	76	1	106228
418	7.7	1.5	3.0	chr1	54957972	54958038	(193998384)	+	MER51-int	LTR/ERV1	1185	1250	(6566)	106225
2362	12.1	3.4	1.2	chr1	54958039	54958447	(193997975)	+	MER51-int	LTR/ERV1	802	1219	(6901)	106229
309	13.2	1.9	1.6	chr1	60065051	60065114	(188891308)	+	MLT2A1	LTR/ERVL	494	567	(0)	115916
487	34.1	4.2	5.7	chr1	60065115	60065378	(188891044)	C	LTR105_Mam	LTR/ERVL	(276)	324	65	115920
285	28.6	18.1	4.9	chr1	60065406	60065648	(188890774)	+	L2a	LINE/L2	3097	3378	(9)	115915
194	27.5	7.2	0.8	chr1	63329437	63329565	(185626857)	C	MIR3	SINE/MIR	(9)	199	64	121844
2932	16.9	1.4	1.3	chr1	76229047	76229602	(172726820)	+	MER89	LTR/ERV1	1	557	(2)	141127
1278	20.1	9.4	2.5	chr1	78966119	78966435	(169989987)	+	MER61A	LTR/ERV1	1	341	(0)	145232
2261	14.4	11.3	8.1	chr1	78966438	78966982	(169989440)	+	MER61-int	LTR/ERV1	3	567	(4650)	145232
290	30.7	0.0	7.3	chr1	79786070	79786178	(169170244)	C	L2c	LINE/L2	(37)	3350	3250	146344
356	26.6	4.4	2.7	chr1	79786191	79786302	(169170120)	+	LTR85a	LTR/Gypsy?	4	117	(585)	146345
277	31.5	4.3	2.6	chr1	79786529	79786642	(169169780)	C	MLT1K	LTR/ERVL-MaLR	(44)	551	436	146346
8650	12.5	4.6	9.9	chr1	86110386	86112054	(162844368)	+	LTR12C	LTR/ERV1	3	1579	(0)	155168
11713	8.0	2.1	0.3	chr1	86923864	86925413	(162031009)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	156348
1811	16.0	5.2	3.6	chr1	89479858	89480213	(159476209)	C	THE1B	LTR/ERVL-MaLR	(2)	362	1	159911
11527	8.2	0.9	0.0	chr1	89480214	89481779	(159474643)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	159911
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
2093	16.4	3.2	4.8	chr1	91785088	91785524	(157170898)	+	L1MB7	LINE/L1	5755	6184	(0)	163237
3663	7.2	0.8	0.6	chr1	94444820	94445298	(154511124)	+	MER9a3	LTR/ERVK	33	512	(0)	167807
2802	9.1	5.8	0.2	chr1	94445299	94445706	(154510716)	+	HERVK9-int	LTR/ERVK	1	432	(5589)	167807
12	19.1	5.9	3.7	chr1	99005053	99005103	(149951319)	+	(CGG)n	Simple_repeat	1	54	(0)	174245
1757	17.0	5.3	0.9	chr1	104732541	104732866	(144223556)	+	LTR3B_	LTR/ERVK	159	499	(0)	182011
668	23.2	8.3	2.0	chr1	104732907	104733108	(144223314)	+	HERVK3-int	LTR/ERVK	17	232	(6970)	182011
3711	19.6	2.5	4.7	chr1	105376450	105377273	(143579149)	+	L1MB3	LINE/L1	5752	6556	(18)	182779
2356	19.9	4.4	3.2	chr1	106348510	106349069	(142607353)	C	MER61-int	LTR/ERV1	(4650)	567	1	183928
1620	13.6	7.3	2.8	chr1	106349070	106349394	(142607028)	C	MER61A	LTR/ERV1	(0)	341	1	183928
869	23.1	6.8	0.8	chr1	109619196	109619431	(139336991)	C	MIR	SINE/MIR	(0)	262	12	188862
530	18.4	13.2	0.8	chr1	109619564	109619719	(139336703)	C	MIR	SINE/MIR	(1)	261	87	188863
19	9.2	8.3	1.9	chr1	109619788	109619835	(139336587)	+	(GGCGGA)n	Simple_repeat	1	52	(0)	188864
195	25.9	5.5	1.2	chr1	113072597	113072682	(135883740)	C	L2c	LINE/L2	(11)	3376	3287	194421
1958	18.5	2.5	3.3	chr1	114029275	114029671	(134926751)	+	MER74A	LTR/ERVL	1	394	(164)	195965
1792	13.7	0.4	0.0	chr1	114029672	114029933	(134926489)	+	HERVH-int	LTR/ERV1	3472	3734	(3979)	195966
2458	12.6	18.1	13.6	chr1	114832195	114832576	(134123846)	C	MER61-int	LTR/ERV1	(4441)	453	3	197356
2147	11.8	2.6	1.2	chr1	114832579	114832914	(134123508)	C	MER61A	LTR/ERV1	(0)	341	1	197359
4543	14.2	1.8	0.1	chr1	114832915	114833614	(134122808)	C	MER50-int	LTR/ERV1	(6490)	715	4	197360
2896	12.1	1.6	3.2	chr1	115587187	115587620	(133368802)	+	MER61B	LTR/ERV1	1	427	(0)	198404
1067	16.8	2.6	6.2	chr1	115587621	115587861	(133368561)	+	MER61-int	LTR/ERV1	1	232	(4985)	198404
2624	13.4	1.6	4.2	chr1	115587839	115588360	(133368062)	+	MER61-int	LTR/ERV1	343	850	(4367)	198404
304	37.6	8.1	0.0	chr1	116765882	116766006	(132190416)	C	MIRb	SINE/MIR	(54)	214	79	200230
326	24.1	18.9	3.5	chr1	116766012	116766153	(132190269)	C	MER96	DNA/hAT-Tip100	(6)	169	1	200231
244	32.3	10.1	0.0	chr1	116766427	116766559	(132189863)	+	L2c	LINE/L2	3239	3386	(1)	200232
2209	10.7	0.0	1.0	chr1	118373219	118373507	(130582915)	C	AluYc	SINE/Alu	(13)	286	1	202674
16	15.8	2.2	4.3	chr1	118373755	118373800	(130582622)	+	A-rich	Low_complexity	1	47	(0)	202675
1933	17.9	8.0	1.3	chr1	118373978	118374374	(130582048)	+	MSTA	LTR/ERVL-MaLR	1	426	(2)	202676
1960	15.7	0.7	2.6	chr1	121222352	121222663	(127733759)	+	AluJo	SINE/Alu	6	311	(1)	206761
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
674	0.0	0.0	0.0	chr1	146039401	146039474	(102916948)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	211996
2118	6.1	9.8	0.0	chr1	146039617	146039893	(102916529)	+	AluSp	SINE/Alu	1	307	(6)	211997
437	32.6	8.9	2.1	chr1	147753796	147753976	(101202446)	+	L2a	LINE/L2	3061	3262	(164)	214575
363	15.7	0.0	13.5	chr1	148288674	148288769	(100667653)	+	MER20	DNA/hAT-Charlie	83	165	(54)	215433
15	17.0	0.0	0.0	chr1	148309843	148309875	(100646547)	+	(CCCCT)n	Simple_repeat	1	33	(0)	215474
6641	22.2	4.3	2.4	chr1	148310438	148312602	(100643820)	+	L1MD1	LINE/L1	641	3077	(3460)	215475
1160	24.0	7.5	9.7	chr1	148434583	148434855	(100521567)	C	MER66-int	LTR/ERV1	(1940)	4736	4548	215725
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
8357	9.0	1.5	1.9	chr1	152422957	152424168	(96532254)	C	HERVK9-int	LTR/ERVK	(4815)	1206	1	222776
4261	5.9	0.0	1.4	chr1	152424169	152424687	(96531735)	C	MER9a3	LTR/ERVK	(0)	512	1	222777
724	16.0	11.2	0.0	chr1	153636280	153636429	(95319993)	+	AluJr	SINE/Alu	134	302	(10)	224446
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
1789	16.7	5.3	0.9	chr1	157499145	157499470	(91456952)	+	MER61A	LTR/ERV1	1	341	(0)	231794
2224	18.5	3.6	6.7	chr1	157499477	157499986	(91456436)	+	MER61-int	LTR/ERV1	7	500	(4717)	231795
11777	12.0	5.7	4.0	chr1	160925075	160925457	(88030965)	C	MER57-int	LTR/ERV1	(3782)	2164	1660	236466
1305	14.8	1.7	7.3	chr1	160925467	160925714	(88030708)	+	MER50	LTR/ERV1	7	240	(494)	236479
1510	16.4	3.6	2.2	chr1	160925698	160925971	(88030451)	+	MER50	LTR/ERV1	433	710	(24)	236479
3335	15.9	0.9	0.6	chr1	160925972	160926495	(88029927)	C	MER57-int	LTR/ERV1	(4281)	1665	1140	236466
2351	21.9	6.2	5.0	chr1	162614809	162615427	(86340995)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	1	239481
546	31.2	7.2	3.1	chr1	162615428	162615576	(86340846)	C	L1ME4c	LINE/L1	(542)	288	124	239480
5048	21.1	11.8	6.9	chr1	165686086	165687705	(83268717)	+	L1MEc	LINE/L1	43	1778	(4622)	244088
2151	19.0	22.4	1.7	chr1	171217815	171218457	(77737965)	C	MER61-int	LTR/ERV1	(4440)	777	1	252371
1995	14.2	4.7	1.2	chr1	171218458	171218786	(77737636)	C	MER61A	LTR/ERV1	(0)	341	1	252371
3184	11.8	0.6	2.8	chr1	171250908	171251403	(77705019)	+	LTR22B	LTR/ERVK	5	489	(3)	252412
424	17.4	0.0	7.5	chr1	171251468	171251573	(77704849)	C	HERVK22-int	LTR/ERVK	(6730)	107	10	252413
629	16.4	11.4	0.0	chr1	171251609	171251748	(77704674)	C	LTR22B2	LTR/ERVK	(1)	599	442	252413
1150	9.5	1.6	0.0	chr1	171251742	171251920	(77704502)	+	LTR22B2	LTR/ERVK	419	600	(0)	252414
2198	28.5	14.2	1.0	chr1	172615278	172616178	(76340244)	+	L2	LINE/L2	34	1072	(2347)	254453
1953	17.9	3.2	0.3	chr1	172616179	172616509	(76339913)	+	MER61A	LTR/ERV1	1	341	(0)	254454
20291	11.3	5.3	3.2	chr1	172616513	172619094	(76337328)	+	MER61-int	LTR/ERV1	4	3133	(2084)	254454
1525	25.2	4.7	7.5	chr1	173257353	173258102	(75698320)	C	MER77B	LTR/ERVL	(115)	823	39	255346
4801	8.8	9.2	2.1	chr1	174678613	174679335	(74277087)	C	LTR17	LTR/ERV1	(0)	780	1	257513
1306	14.0	0.0	7.4	chr1	186402405	186402625	(62553797)	C	AluJo	SINE/Alu	(22)	290	86	275540
616	24.0	2.3	0.0	chr1	186402635	186402759	(62553663)	C	AluJo	SINE/Alu	(56)	256	129	275542
568	20.2	11.3	0.8	chr1	186402763	186402881	(62553541)	C	AluJr4	SINE/Alu	(179)	133	1	275543
20	8.0	0.0	0.0	chr1	190475827	190475853	(58480569)	+	(T)n	Simple_repeat	1	27	(0)	280951
16	13.7	0.0	0.0	chr1	190476252	190476276	(58480146)	+	(A)n	Simple_repeat	1	25	(0)	280952
5778	8.1	5.3	0.1	chr1	192895194	192895976	(56060446)	C	LTR12	LTR/ERV1	(0)	826	1	284032
9862	13.5	2.0	0.3	chr1	194935052	194936603	(54019819)	+	THE1B-int	LTR/ERVL-MaLR	1	1578	(2)	286798
341	35.3	11.4	4.7	chr1	197897788	197898364	(51058058)	C	L2c	LINE/L2	(784)	2635	2015	290509
1949	20.5	15.8	7.5	chr1	203983688	203984447	(44971975)	+	MER21B	LTR/ERVL	35	860	(8)	300721
2314	11.0	0.3	0.0	chr1	205243103	205243412	(43713010)	+	AluSx1	SINE/Alu	1	311	(1)	303067
339	34.5	18.5	2.1	chr1	205243413	205245062	(43711360)	C	L2c	LINE/L2	(629)	2790	790	303066
206	20.4	2.2	0.0	chr1	205648379	205648422	(43308000)	C	MIR	SINE/MIR	(158)	104	60	303841
16	21.7	0.0	0.0	chr1	214281540	214281571	(34674851)	+	G-rich	Low_complexity	1	32	(0)	317487
3284	8.6	1.4	0.2	chr1	222916841	222917272	(26039150)	+	LTR3B	LTR/ERVK	1	437	(0)	329899
14	0.0	13.8	0.0	chr1	222917345	222917373	(26039049)	+	(CAGGGA)n	Simple_repeat	1	33	(0)	329900
628	18.4	17.9	1.1	chr1	222917374	222917554	(26038868)	+	HERVK3-int	LTR/ERVK	15	232	(6970)	329899
21	24.0	3.4	5.5	chr1	223081094	223081189	(25875233)	+	(GT)n	Simple_repeat	1	94	(0)	330159
1975	10.3	3.5	3.5	chr1	223839658	223839947	(25116475)	+	AluSz	SINE/Alu	1	290	(22)	331306
9693	7.0	12.2	1.4	chr1	224351657	224353059	(24603363)	C	LTR12C	LTR/ERV1	(2)	1577	3	332405
19992	12.6	1.3	2.3	chr1	227573664	227574941	(21381481)	C	L1PA13	LINE/L1	(0)	6783	5505	337670
314	20.5	0.4	0.0	chr1	227574942	227575018	(21381404)	C	AluY	SINE/Alu	(0)	301	237	337671
19992	12.6	1.3	2.3	chr1	227575019	227579140	(21377282)	C	L1PA13	LINE/L1	(0)	5504	1377	337670
826	7.2	8.3	0.0	chr1	228555793	228555903	(20400519)	+	5S	rRNA	1	121	(0)	338873
2308	8.2	0.0	2.5	chr1	228555908	228556226	(20400196)	C	AluY	SINE/Alu	(0)	311	1	338874
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
248	34.4	0.0	3.1	chr1	228789030	228789125	(20167297)	+	L2c	LINE/L2	3251	3343	(44)	339193
741	18.8	5.1	1.3	chr1	228789133	228789283	(20167139)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(1)	1067	911	339194
1884	27.9	5.9	5.7	chr1	229192799	229193612	(19762810)	+	Charlie7	DNA/hAT-Charlie	346	1161	(1451)	339821
4942	24.4	8.4	10.0	chr1	231979394	231980252	(16976170)	C	L1MC5a	LINE/L1	(1385)	1392	633	344333
2197	12.8	5.5	1.7	chr1	232742800	232743149	(16213273)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	345365
349	33.9	6.8	3.5	chr1	232743154	232743506	(16212916)	+	L2c	LINE/L2	2694	3054	(333)	345363
2395	7.8	0.7	0.0	chr1	232743507	232743802	(16212620)	C	AluSg4	SINE/Alu	(12)	298	1	345366
1344	12.6	0.0	0.0	chr1	233500001	233500175	(15456247)	+	AluSc8	SINE/Alu	137	311	(0)	346498
335	35.3	7.2	6.3	chr1	233500372	233500686	(15455736)	C	MLT1J	LTR/ERVL-MaLR	(95)	417	100	346499
16	0.0	0.0	0.0	chr1	234356656	234356672	(14599750)	+	(T)n	Simple_repeat	1	17	(0)	347726
2009	18.1	5.4	0.8	chr1	234689214	234689603	(14266819)	C	MLT1A1	LTR/ERVL-MaLR	(0)	457	1	348284
185	21.7	4.2	0.0	chr1	235068792	235068837	(13887585)	C	L2a	LINE/L2	(0)	3426	3379	348960
756	14.9	2.5	2.5	chr1	235068868	235068988	(13887434)	+	FLAM_C	SINE/Alu	10	130	(13)	348961
1015	18.1	0.6	0.0	chr1	235068989	235069148	(13887274)	C	AluJb	SINE/Alu	(28)	284	124	348962
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2300	9.1	0.7	0.3	chr1	237155167	237155462	(11800960)	C	AluY	SINE/Alu	(1)	310	14	352845
3134	7.9	4.8	0.0	chr1	237603009	237603464	(11352958)	+	LSU-rRNA_Hsa	rRNA	3637	4115	(920)	353582
24526	4.8	0.6	0.2	chr1	237603459	237607585	(11348837)	+	L1PA5	LINE/L1	2032	6152	(2)	353583
2187	18.9	4.9	6.7	chr1	238929026	238929325	(10027097)	C	MER4B-int	LTR/ERV1	(6457)	1663	1362	355384
259	9.8	6.8	0.0	chr1	238929338	238929378	(10027044)	C	MER4B-int	LTR/ERV1	(6709)	49	6	355387
558	20.9	0.9	0.0	chr1	238929383	238929487	(10026935)	C	MER4D	LTR/ERV1	(0)	903	798	355387
2630	12.6	5.7	3.1	chr1	242211188	242211670	(6744752)	+	LTR22B1	LTR/ERVK	1	496	(0)	360634
5180	10.7	2.8	0.5	chr1	242211672	242212415	(6744007)	+	HERVK22-int	LTR/ERVK	2	762	(6075)	360634
2039	12.2	0.3	2.0	chr1	243755079	243755373	(5201049)	C	AluSz6	SINE/Alu	(22)	290	1	363015
4704	14.4	3.0	15.2	chr1	244578707	244579614	(4376808)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(279)	789	1	364385
881	18.6	6.0	11.9	chr10	4676224	4676492	(129120930)	+	MLT1C-int	LTR/ERVL-MaLR	1119	1370	(1)	376776
1034	25.7	7.5	3.6	chr10	4676523	4676944	(129120478)	+	MLT1C	LTR/ERVL-MaLR	17	467	(0)	376776
19	12.0	0.0	2.6	chr10	5813435	5813472	(127983950)	+	(GGGAG)n	Simple_repeat	1	38	(0)	378339
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
706	23.5	18.0	1.2	chr10	7002617	7002956	(126794466)	+	LTR16A	LTR/ERVL	21	430	(21)	380413
15	9.7	0.0	0.0	chr10	13074703	13074724	(120722698)	+	(CA)n	Simple_repeat	1	22	(0)	390059
270	21.2	5.7	0.0	chr10	13075261	13075326	(120722096)	+	L2a	LINE/L2	3331	3400	(26)	390060
1758	10.6	0.8	0.0	chr10	19087557	19087820	(114709602)	C	L1MA2	LINE/L1	(0)	6304	6039	400085
8632	15.0	2.9	2.2	chr10	19493985	19494978	(114302444)	+	L1PREC2	LINE/L1	2678	3683	(4472)	400671
567	31.2	6.9	1.1	chr10	22039652	22039842	(111757580)	C	MIRb	SINE/MIR	(44)	218	16	404726
1753	17.6	0.4	0.4	chr10	23082167	23082445	(110714977)	+	AluJo	SINE/Alu	2	280	(32)	406243
511	23.0	5.4	0.7	chr10	26504220	26504359	(107293063)	+	Tigger9a	DNA/TcMar-Tigger	577	723	(9)	411789
9363	10.6	10.8	0.4	chr10	36819756	36821167	(96976255)	+	LTR12C	LTR/ERV1	2	1578	(1)	428647
3976	8.5	0.4	0.0	chr10	42486524	42487016	(91310406)	+	MER9B	LTR/ERVK	1	495	(4)	432150
35955	17.0	2.0	1.6	chr10	42487021	42494108	(91303314)	+	HERVK9-int	LTR/ERVK	1	7369	(65)	432150
12	12.1	0.0	11.1	chr10	42639032	42639076	(91158346)	+	A-rich	Low_complexity	1	45	(0)	432329
19	17.2	0.0	0.0	chr10	52315146	52315178	(81482244)	+	G-rich	Low_complexity	1	33	(0)	446107
4579	5.1	0.4	0.0	chr10	63847430	63847940	(69949482)	+	MER9a2	LTR/ERVK	1	513	(0)	462519
23785	4.7	0.4	0.1	chr10	63847945	63850729	(69946693)	+	HERVK9-int	LTR/ERVK	5	2798	(3223)	462520
462	29.0	1.6	0.8	chr10	64041466	64041673	(69755749)	C	L1M3e	LINE/L1	(6676)	813	653	462798
1091	27.6	10.4	2.4	chr10	64041954	64042601	(69754821)	C	L1M3e	LINE/L1	(6588)	901	16	462798
621	23.9	2.2	2.8	chr10	67791960	67792140	(66005282)	+	L1ME4b	LINE/L1	343	522	(370)	467894
1237	11.9	0.0	0.6	chr10	67792159	67792318	(66005104)	+	AluSq2	SINE/Alu	128	286	(27)	467895
30	0.0	0.0	0.0	chr10	67792320	67792348	(66005074)	+	(AAAAG)n	Simple_repeat	1	29	(0)	467896
572	26.3	7.4	0.5	chr10	67792349	67792562	(66004860)	+	L1ME4b	LINE/L1	521	750	(142)	467894
3045	13.9	6.8	5.2	chr10	71955167	71955757	(61841665)	+	LTR14B	LTR/ERVK	8	608	(0)	476256
30563	8.8	1.8	0.9	chr10	71955758	71955958	(61841464)	+	HERVK14-int	LTR/ERVK	1	184	(5912)	476256
6278	11.4	1.2	2.3	chr10	71955959	71956922	(61840500)	+	LTR13_	LTR/ERVK	1	954	(0)	476257
9866	19.4	7.0	2.3	chr10	76470966	76475357	(57322065)	+	L1MB8	LINE/L1	2459	7033	(5)	484541
522	31.7	8.0	0.4	chr10	77360985	77361225	(56436197)	+	MIRb	SINE/MIR	6	266	(2)	485777
20	12.6	0.0	0.0	chr10	77361233	77361267	(56436155)	+	(ATC)n	Simple_repeat	1	35	(0)	485778
645	30.9	4.4	4.2	chr10	77958923	77959160	(55838262)	+	MIRb	SINE/MIR	26	265	(3)	486898
434	24.2	0.8	8.2	chr10	77959522	77959656	(55837766)	+	MLT1N2	LTR/ERVL-MaLR	438	562	(0)	486900
370	22.3	11.2	1.0	chr10	77959789	77959859	(55837563)	+	L1M5	LINE/L1	5356	5437	(687)	486901
1990	15.3	0.3	0.3	chr10	77959860	77960166	(55837256)	+	AluJb	SINE/Alu	1	307	(5)	486902
457	27.1	6.2	3.7	chr10	78505126	78505364	(55292058)	+	MIR3	SINE/MIR	2	257	(11)	487922
434	23.8	2.9	2.9	chr10	78505278	78505381	(55292041)	+	L2a	LINE/L2	3322	3425	(1)	487923
461	22.4	12.0	2.0	chr10	78762322	78762471	(55034951)	+	MLT1J	LTR/ERVL-MaLR	15	181	(331)	488390
563	28.4	7.2	5.8	chr10	85536611	85536954	(48260468)	C	MER34-int	LTR/ERV1	(7826)	381	33	498258
455	22.5	5.6	14.2	chr10	85536980	85537311	(48260111)	C	MER34A1	LTR/ERV1	(0)	587	286	498258
181	35.1	3.4	0.0	chr10	103265812	103265868	(30531554)	+	L3b	LINE/CR1	5162	5220	(12)	528553
22	20.4	1.7	1.7	chr10	103266040	103266098	(30531324)	+	GA-rich	Low_complexity	1	60	(0)	528554
1923	14.3	5.9	0.6	chr10	104608119	104608441	(29188981)	+	MER61A	LTR/ERV1	1	341	(0)	530992
2409	17.0	20.3	5.2	chr10	104608442	104609121	(29188301)	+	MER61-int	LTR/ERV1	1	783	(4434)	530992
255	24.6	5.2	1.4	chr10	111607229	111607302	(22190120)	+	MIRc	SINE/MIR	21	97	(171)	541359
237	23.9	7.0	15.4	chr10	112863970	112864157	(20933265)	+	L1ME4a	LINE/L1	5946	6116	(8)	543340
621	18.5	16.4	1.6	chr10	112864236	112864422	(20933000)	+	MLT1J	LTR/ERVL-MaLR	3	222	(290)	543341
15	7.0	6.7	0.0	chr10	119030612	119030641	(14766781)	+	(CCGC)n	Simple_repeat	1	32	(0)	553074
15	3.3	5.4	7.7	chr10	119030642	119030647	(14766775)	+	(GCC)n	Simple_repeat	2	39	(0)	553075
9195	5.9	16.0	0.1	chr10	120923642	120924967	(12872455)	+	LTR12C	LTR/ERV1	3	1579	(0)	556368
1514	22.1	6.7	3.8	chr10	121467652	121468098	(12329324)	+	MLT1C	LTR/ERVL-MaLR	5	465	(2)	557222
2196	12.5	0.3	0.0	chr10	125888778	125889066	(7908356)	+	AluSx1	SINE/Alu	1	290	(22)	564150
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
29	0.0	0.0	0.0	chr10	129039903	129039934	(4757488)	+	(A)n	Simple_repeat	1	32	(0)	568079
219	31.1	0.7	4.3	chr10	129040225	129040365	(4757057)	+	L2c	LINE/L2	2778	2913	(506)	568080
16	22.7	0.0	4.0	chr10	129958880	129958929	(3838493)	+	(CGC)n	Simple_repeat	1	50	(0)	568921
13	23.7	0.0	4.2	chr10	129959277	129959324	(3838098)	+	G-rich	Low_complexity	1	48	(0)	568922
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
259	12.1	2.8	3.5	chr11	11246866	11247010	(123839612)	C	HERV17-int	LTR/ERV1	(7779)	847	704	588885
84	25.4	0.5	0.9	chr11	11247018	11247230	(123839392)	+	(TC)n	Simple_repeat	1	214	(0)	588886
17437	15.3	0.9	3.3	chr11	13618191	13619448	(121467174)	C	L1PA15	LINE/L1	(0)	2986	1740	592585
2370	10.0	0.3	0.0	chr11	13619449	13619748	(121466874)	+	AluSg	SINE/Alu	1	301	(9)	592587
7845	22.8	4.4	3.8	chr11	13619749	13621146	(121465476)	C	L1PA15	LINE/L1	(5046)	1739	288	592585
857	23.2	4.5	6.0	chr11	27291136	27291245	(107795377)	+	MIRb	SINE/MIR	13	120	(148)	613729
2514	10.3	4.0	0.0	chr11	27291246	27291586	(107795036)	C	LTR18A	LTR/ERVL	(0)	357	3	613730
857	23.2	4.5	6.0	chr11	27291587	27291723	(107794899)	+	MIRb	SINE/MIR	121	256	(12)	613729
406	28.1	7.1	3.0	chr11	32223356	32223626	(102862996)	+	LTR33A	LTR/ERVL	7	289	(231)	621216
883	26.0	1.6	3.5	chr11	32223669	32223927	(102862695)	+	LTR33A	LTR/ERVL	263	516	(4)	621216
1646	25.2	3.3	1.9	chr11	32870516	32870931	(102215691)	C	LTR38-int	LTR/ERV1	(1364)	422	1	622379
744	19.3	0.7	1.5	chr11	32870933	32871069	(102215553)	C	LTR38A1	LTR/ERV1	(0)	543	408	622379
2230	10.9	0.3	3.3	chr11	32871092	32871393	(102215229)	C	AluSx	SINE/Alu	(19)	293	1	622380
939	29.0	14.2	4.3	chr11	34292997	34293626	(100792996)	C	L2a	LINE/L2	(653)	2766	2064	624997
1729	10.1	0.0	0.0	chr11	34293727	34293943	(100792679)	C	AluSx3	SINE/Alu	(14)	297	81	624999
373	27.1	5.1	3.1	chr11	35494747	35494952	(99591670)	+	Charlie7	DNA/hAT-Charlie	6	221	(51)	626843
7295	4.5	0.1	0.0	chr11	43166894	43167754	(91918868)	C	HERVK11D-int	LTR/ERVK	(6890)	862	1	638021
6935	6.9	2.7	0.0	chr11	43167755	43168627	(91917995)	C	MER11D	LTR/ERVK	(0)	897	1	638021
3710	8.2	4.7	0.0	chr11	59923570	59924058	(75162564)	+	MER9a1	LTR/ERVK	1	513	(0)	657661
30156	5.7	1.0	0.2	chr11	59924059	59927980	(75158642)	+	HERVK9-int	LTR/ERVK	1	3953	(2068)	657661
5042	10.1	9.2	3.2	chr11	61201346	61202176	(73884446)	C	LTR12D	LTR/ERV1	(0)	1254	370	659700
353	27.9	7.2	5.5	chr11	61390878	61391040	(73695582)	+	LTR33	LTR/ERVL	45	210	(305)	660080
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
2446	10.0	0.0	0.3	chr11	61634187	61634497	(73452125)	+	AluSx4	SINE/Alu	1	310	(0)	660559
182	29.7	8.6	0.0	chr11	61634802	61634865	(73451757)	+	MIRc	SINE/MIR	73	142	(126)	660560
3166	10.9	0.0	0.5	chr11	62251757	62252189	(72834433)	+	LTR3	LTR/ERVK	1	431	(1)	661741
13534	10.6	3.0	0.2	chr11	62252197	62254111	(72832511)	+	HERVK3-int	LTR/ERVK	1	1970	(5232)	661741
2269	10.4	0.0	4.6	chr11	63472824	63473130	(71613492)	+	AluSz6	SINE/Alu	3	295	(17)	663730
858	18.0	0.0	0.0	chr11	63473152	63473290	(71613332)	+	Tigger1	DNA/TcMar-Tigger	1	139	(2279)	663731
1390	13.6	2.3	0.0	chr11	63473287	63473500	(71613122)	+	Tigger1	DNA/TcMar-Tigger	2200	2418	(0)	663732
361	30.6	8.1	0.7	chr11	66977980	66978004	(68108618)	+	L2b	LINE/L2	3265	3290	(136)	670623
102	23.3	0.8	0.4	chr11	69542630	69542870	(65543752)	+	(CTCCGCA)n	Simple_repeat	1	243	(0)	675260
1674	12.0	10.4	0.0	chr11	70227338	70227604	(64859018)	+	AluSx1	SINE/Alu	1	298	(14)	676476
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
15	18.7	3.9	3.7	chr11	72244013	72244100	(62842522)	+	G-rich	Low_complexity	1	88	(0)	679599
21322	9.7	1.9	0.2	chr11	73943577	73946851	(61139771)	C	HERVK14-int	LTR/ERVK	(2732)	3364	1	683083
3503	12.4	1.0	5.8	chr11	73946852	73947474	(61139148)	C	LTR14B	LTR/ERVK	(0)	608	16	683083
221	23.1	9.3	2.5	chr11	76193206	76193285	(58893337)	C	MIRb	SINE/MIR	(46)	222	137	687492
21	21.1	5.5	1.3	chr11	76193387	76193459	(58893163)	+	(TGGCCG)n	Simple_repeat	1	77	(0)	687493
215	34.6	2.3	0.3	chr11	76193492	76193592	(58893030)	+	MIR3	SINE/MIR	19	122	(108)	687494
224	26.9	0.0	4.3	chr11	76698144	76698213	(58388409)	C	L2a	LINE/L2	(20)	3406	3340	688492
452	34.6	3.0	0.6	chr11	85368600	85368759	(49717863)	+	LTR16	LTR/ERVL	16	179	(259)	703797
1021	13.9	42.2	1.3	chr11	85368772	85369012	(49717610)	+	MER61A	LTR/ERV1	1	341	(0)	703798
3179	18.3	4.2	2.0	chr11	85369013	85369703	(49716919)	+	MER61-int	LTR/ERV1	1	707	(4510)	703798
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
4457	21.2	2.6	5.5	chr11	97520429	97521640	(37564982)	C	MER4B-int	LTR/ERV1	(6226)	1349	13	721317
5249	8.2	2.7	1.5	chr11	97521652	97522407	(37564215)	C	MER4E	LTR/ERV1	(0)	766	1	721320
1510	18.0	7.0	2.8	chr11	98758549	98758874	(36327748)	+	MER61A	LTR/ERV1	1	341	(0)	722927
3114	19.4	9.0	1.7	chr11	98758875	98759593	(36327029)	+	MER61-int	LTR/ERV1	1	777	(4440)	722927
4236	7.2	0.8	0.0	chr11	107254930	107255426	(27831196)	C	LTR2C	LTR/ERV1	(0)	501	1	734638
2035	22.2	6.2	7.7	chr11	107255430	107255573	(27831049)	C	MER41-int	LTR/ERV1	(3556)	2390	2303	734639
4577	28.9	10.1	3.9	chr11	108027008	108027122	(27059500)	+	L2a	LINE/L2	1814	1918	(1501)	736079
1783	11.9	10.7	3.1	chr11	108027123	108027273	(27059349)	C	AluSz6	SINE/Alu	(1)	311	134	736081
2293	12.8	0.7	0.0	chr11	108027274	108027571	(27059051)	C	AluSx1	SINE/Alu	(12)	300	1	736082
8718	7.0	17.0	1.4	chr11	110300143	110301469	(24785153)	C	LTR12C	LTR/ERV1	(0)	1579	3	739591
444	11.1	0.0	0.0	chr11	110301471	110301533	(24785089)	+	AluJb	SINE/Alu	231	293	(19)	739588
358	24.8	6.0	1.6	chr11	110301534	110301660	(24784962)	+	L1M5	LINE/L1	5609	5741	(383)	739586
1816	16.0	3.2	0.7	chr11	110301673	110301972	(24784650)	+	AluJo	SINE/Alu	5	312	(0)	739592
7023	17.1	4.4	9.5	chr11	110598657	110600682	(24485940)	+	MER52D	LTR/ERV1	7	2112	(11)	740059
16	21.8	3.6	1.8	chr11	118790981	118791035	(16295587)	+	(CCCGCC)n	Simple_repeat	1	57	(0)	753566
17	19.5	5.1	6.0	chr11	118791133	118791211	(16295411)	+	(TCGC)n	Simple_repeat	1	83	(0)	753567
240	16.3	0.0	0.0	chr11	118811318	118811360	(16275262)	C	MLT1K	LTR/ERVL-MaLR	(22)	573	531	753608
2006	12.7	0.3	2.0	chr11	118811371	118811473	(16275149)	+	AluSz6	SINE/Alu	1	103	(209)	753609
2268	12.4	6.6	0.0	chr11	118811474	118811829	(16274793)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	753610
1540	24.8	8.4	7.3	chr11	120004463	120005173	(15081449)	C	MER21C	LTR/ERVL	(113)	825	8	755830
688	32.4	6.9	7.1	chr11	120985416	120985807	(14100815)	+	L3	LINE/CR1	3708	4098	(1)	757502
13	23.3	4.4	0.0	chr11	120985966	120986010	(14100612)	+	(CCG)n	Simple_repeat	1	47	(0)	757503
19	9.2	2.9	0.0	chr11	120986286	120986320	(14100302)	+	(GGCGG)n	Simple_repeat	1	36	(0)	757504
1813	15.4	0.0	5.5	chr11	121122556	121122867	(13963755)	+	AluJb	SINE/Alu	3	297	(15)	757676
940	14.8	0.6	3.0	chr11	121122868	121122975	(13963647)	+	MLT1A0-int	LTR/ERVL-MaLR	61	163	(1572)	757675
954	13.6	0.8	0.0	chr11	122575882	122576013	(12510609)	C	FLAM_C	SINE/Alu	(10)	133	1	759791
316	35.0	8.3	6.2	chr11	122576014	122576196	(12510426)	C	L1M5	LINE/L1	(1109)	5037	4850	759790
1014	20.0	0.0	0.0	chr11	122576197	122576361	(12510261)	+	AluJo	SINE/Alu	137	301	(11)	759792
316	35.0	8.3	6.2	chr11	122576362	122576405	(12510217)	C	L1M5	LINE/L1	(1297)	4849	4817	759790
2868	18.4	8.1	6.0	chr11	122576406	122576807	(12509815)	C	LTR8A	LTR/ERV1	(0)	727	324	759793
2227	8.3	0.4	0.0	chr11	126280986	126281262	(8805360)	+	AluSp	SINE/Alu	21	298	(15)	765818
229	25.7	7.1	12.5	chr11	126281340	126281459	(8805163)	+	L2c	LINE/L2	3268	3380	(7)	765819
590	14.7	5.5	0.0	chr11	126281656	126281757	(8804865)	+	U13	snRNA	1	108	(0)	765820
18	23.5	2.2	0.0	chr11	130604467	130604511	(4482111)	+	(TC)n	Simple_repeat	1	46	(0)	772156
418	35.3	8.4	6.2	chr11	133622373	133623077	(1463545)	+	L2c	LINE/L2	2658	3387	(0)	776175
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
323	22.4	9.6	1.2	chr12	608860	608945	(132666364)	+	MIR3	SINE/MIR	74	167	(41)	779064
198	32.8	0.0	4.3	chr12	609344	609413	(132665896)	C	L2c	LINE/L2	(41)	3346	3280	779065
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
1899	24.5	5.9	5.2	chr12	8853375	8853930	(124421379)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	1	793003
599	20.3	10.8	3.9	chr12	8853931	8854055	(124421254)	+	MER5A1	DNA/hAT-Charlie	26	166	(0)	793002
1729	13.7	1.1	0.0	chr12	10188221	10188482	(123086827)	+	AluSx	SINE/Alu	44	308	(4)	794881
53	0.0	0.0	0.0	chr12	10188492	10188539	(123086770)	+	(GGAA)n	Simple_repeat	1	48	(0)	794882
2376	9.7	1.3	0.0	chr12	10674473	10674780	(122600529)	+	AluSx1	SINE/Alu	1	312	(0)	795512
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
2896	15.0	5.0	0.3	chr12	22309085	22309770	(110965539)	+	MER72	LTR/ERV1	5	722	(0)	811937
12	10.0	5.6	5.3	chr12	22544213	22544248	(110731061)	+	G-rich	Low_complexity	1	38	(0)	812278
16	13.3	2.7	5.3	chr12	22544266	22544302	(110731007)	+	(GC)n	Simple_repeat	1	38	(0)	812279
2675	22.9	7.9	3.0	chr12	24156587	24157523	(109117786)	C	Helitron1Na_Mam	RC/Helitron	(2)	1060	74	814498
5210	10.5	5.8	0.1	chr12	30696467	30697255	(102578054)	+	LTR1A2	LTR/ERV1	1	837	(0)	824047
1416	22.1	6.2	1.9	chr12	32043442	32043764	(101231545)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	130	826670
1627	20.6	12.0	2.1	chr12	32043765	32044045	(101231264)	+	MSTA	LTR/ERVL-MaLR	1	323	(105)	826671
1866	16.6	20.5	5.8	chr12	32044046	32044507	(101230802)	C	LTR10B1	LTR/ERV1	(0)	547	1	826672
361	20.6	24.6	0.0	chr12	40315061	40315186	(92960123)	+	MIR3	SINE/MIR	42	208	(0)	833625
1751	14.9	6.6	1.4	chr12	42401851	42402138	(90873171)	C	AluJb	SINE/Alu	(8)	304	1	836574
333	34.9	15.3	1.3	chr12	45660114	45660383	(87614926)	C	L2c	LINE/L2	(238)	3149	2830	841163
1717	24.1	6.5	3.0	chr12	45660384	45660846	(87614463)	+	LTR16B1	LTR/ERVL	1	480	(0)	841164
192	33.3	0.0	1.3	chr12	46841793	46841871	(86433438)	C	MER5B	DNA/hAT-Charlie	(100)	78	1	842773
262	31.6	2.1	4.0	chr12	46842152	46842250	(86433059)	+	MER5A	DNA/hAT-Charlie	64	160	(29)	842774
228	29.6	10.2	0.0	chr12	48296012	48296126	(84979183)	+	MIR3	SINE/MIR	34	161	(47)	845020
50260	4.5	1.4	0.1	chr12	50492385	50498326	(82776983)	C	HERVK9-int	LTR/ERVK	(0)	6021	1	849361
4393	6.0	0.0	1.4	chr12	50498327	50498846	(82776463)	C	MER9a1	LTR/ERVK	(0)	513	1	849361
39	2.6	0.0	0.0	chr12	55743401	55743440	(77531869)	+	(GCG)n	Simple_repeat	1	40	(0)	858163
2252	10.0	0.3	0.0	chr12	64403683	64403981	(68871328)	+	AluSz	SINE/Alu	1	300	(12)	871075
16501	20.7	4.8	1.9	chr12	67620706	67625944	(65649365)	+	ERVL-int	LTR/ERVL	14	5757	(0)	876190
5740	6.4	2.0	0.4	chr12	69139518	69140271	(64135038)	+	MER4E	LTR/ERV1	1	766	(0)	878770
5552	12.7	2.6	1.0	chr12	69140272	69141104	(64134205)	+	MER4B-int	LTR/ERV1	1	847	(5911)	878770
2087	13.8	2.6	0.9	chr12	69199831	69200165	(64075144)	+	LTR3B_	LTR/ERVK	159	499	(0)	878887
54	1.2	10.6	0.0	chr12	69200256	69200340	(64074969)	+	(AGAGATA)n	Simple_repeat	1	94	(0)	878888
5139	13.6	1.0	2.8	chr12	74000345	74001175	(59274134)	+	HSMAR2	DNA/TcMar-Mariner	1	816	(486)	885686
333	32.0	3.1	5.5	chr12	74001185	74001349	(59273960)	+	LTR16A1	LTR/ERVL	206	366	(90)	885687
2683	14.9	3.5	0.6	chr12	74001371	74001844	(59273465)	+	HSMAR2	DNA/TcMar-Mariner	814	1301	(1)	885688
2226	18.1	3.6	6.4	chr12	75019830	75020343	(58254966)	C	MER61-int	LTR/ERV1	(4718)	499	1	886979
1499	16.2	12.9	1.7	chr12	75020344	75020645	(58254664)	C	MER61A	LTR/ERV1	(0)	341	1	886979
663	2.5	0.0	0.0	chr12	75020650	75020729	(58254580)	+	HERVL-int	LTR/ERVL	5575	5654	(0)	886981
8568	6.1	0.2	0.1	chr12	84101099	84102168	(49173141)	+	MER11C	LTR/ERVK	1	1071	(0)	899857
1106	11.5	0.0	0.0	chr12	84102186	84102341	(49172968)	C	HERVK11-int	LTR/ERVK	(844)	7109	6954	899858
32751	7.9	0.4	0.1	chr12	84102326	84106558	(49168751)	C	HERVK11-int	LTR/ERVK	(1188)	6765	2522	899858
4914	22.5	7.5	4.3	chr12	86005226	86006536	(47268773)	+	MER31-int	LTR/ERV1	3563	4915	(21)	902405
1432	19.4	8.2	8.2	chr12	86006537	86007002	(47268307)	+	MER31B	LTR/ERV1	1	466	(0)	902405
3171	12.2	2.0	2.0	chr12	87074890	87075384	(46199925)	+	LTR3B_	LTR/ERVK	1	495	(4)	903746
299	7.5	0.0	2.4	chr12	87075386	87075426	(46199883)	+	LTR3B_	LTR/ERVK	460	499	(0)	903747
15	21.2	9.2	0.0	chr12	87075509	87075573	(46199736)	+	(ATAGAG)n	Simple_repeat	1	71	(0)	903748
277	19.7	0.0	2.9	chr12	87075828	87075895	(46199414)	+	HERVK3-int	LTR/ERVK	28	93	(7109)	903749
418	30.6	5.3	3.0	chr12	88027939	88028135	(45247174)	+	MIRb	SINE/MIR	30	230	(0)	904976
41	2.1	2.0	1.9	chr12	92621439	92621489	(40653820)	+	(TCTGCTAGTC)n	Simple_repeat	1	52	(0)	911847
3293	8.1	0.0	0.9	chr12	92621706	92622155	(40653154)	C	LTR3B_	LTR/ERVK	(53)	446	1	911848
420	23.4	1.0	0.4	chr12	94031261	94031371	(39243938)	+	MER5A1	DNA/hAT-Charlie	14	122	(67)	914532
181	17.8	5.2	11.0	chr12	94031427	94031508	(39243801)	+	MER5A	DNA/hAT-Charlie	113	189	(0)	914533
3879	5.9	4.5	0.0	chr12	94355584	94356073	(38919236)	+	MER9a1	LTR/ERVK	1	513	(0)	915078
20108	5.6	2.9	2.6	chr12	94356074	94356835	(38918474)	+	HERVK9-int	LTR/ERVK	1	781	(5240)	915078
195	27.9	3.4	5.5	chr12	104958963	104959053	(28316256)	C	L2b	LINE/L2	(0)	3426	3338	933577
1366	14.8	19.2	0.4	chr12	104959106	104959342	(28315967)	+	AluJr	SINE/Alu	2	293	(19)	933578
294	35.3	8.8	2.6	chr12	106226082	106226273	(27049036)	+	MIRb	SINE/MIR	3	207	(61)	935849
2404	8.7	0.0	0.0	chr12	106226389	106226686	(27048623)	C	AluSc8	SINE/Alu	(7)	304	7	935850
10344	12.5	4.0	0.5	chr12	107096027	107097597	(26177712)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	937401
1809	10.5	4.8	0.4	chr12	107826196	107826453	(25448856)	C	HERVK-int	LTR/ERVK	(7266)	270	1	938935
5947	15.6	1.1	1.1	chr12	107826454	107827421	(25447888)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	938935
8911	1.3	0.0	0.0	chr12	110570038	110571005	(22704304)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	945025
4609	1.2	0.2	0.0	chr12	110571006	110571520	(22703789)	+	HERVK-int	LTR/ERVK	1	516	(7020)	945025
287	29.6	0.0	6.9	chr12	115379359	115379474	(17895835)	C	L2c	LINE/L2	(34)	3353	3246	955888
382	25.2	1.0	2.8	chr12	115379737	115379842	(17895467)	C	MIRb	SINE/MIR	(132)	136	33	955889
335	32.5	11.2	0.5	chr12	115542373	115542579	(17732730)	+	MIRb	SINE/MIR	23	254	(14)	956244
2234	13.0	0.0	0.0	chr12	115681191	115681491	(17593818)	C	AluSz	SINE/Alu	(11)	301	1	956537
1799	15.9	6.1	1.0	chr12	115681575	115681869	(17593440)	+	AluJb	SINE/Alu	2	312	(0)	956538
2223	11.2	0.0	3.2	chr12	116252980	116253292	(17022017)	+	AluSq2	SINE/Alu	1	303	(10)	957590
6225	24.9	6.0	4.0	chr12	116253293	116253744	(17021565)	+	L1ME1	LINE/L1	3482	3949	(2197)	957589
495	23.9	12.4	4.7	chr12	116910536	116910750	(16364559)	+	L2a	LINE/L2	3192	3425	(1)	959264
14	14.6	0.0	3.1	chr12	116910931	116910962	(16364347)	+	(GCG)n	Simple_repeat	1	32	(0)	959265
15	16.6	0.0	2.8	chr12	116911069	116911104	(16364205)	+	(GGCGCA)n	Simple_repeat	1	36	(0)	959266
12	5.6	0.0	0.0	chr12	117640646	117640664	(15634645)	+	(GCA)n	Simple_repeat	1	19	(0)	960775
283	29.3	4.3	8.7	chr12	117640773	117640944	(15634365)	C	MER135	DNA	(56)	172	9	960776
2129	18.6	3.2	4.6	chr12	117640993	117641088	(15634221)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	379	960777
1959	12.4	0.4	0.7	chr12	117641089	117641363	(15633946)	C	AluSx	SINE/Alu	(3)	309	36	960778
422	23.1	0.0	1.2	chr12	118079041	118079133	(15196176)	+	L2a	LINE/L2	3279	3421	(5)	961780
1723	6.8	0.0	0.0	chr12	121625754	121625960	(11649349)	+	AluSg	SINE/Alu	1	207	(103)	969868
313	25.6	4.3	4.3	chr12	121626044	121626137	(11649172)	+	L2a	LINE/L2	3324	3417	(9)	969865
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
2230	5.4	0.0	0.0	chr12	132681333	132681592	(593717)	C	AluY	SINE/Alu	(1)	310	51	989757
632	17.8	10.6	0.0	chr12	132888328	132888445	(386864)	+	FLAM_C	SINE/Alu	1	132	(11)	990112
23	30.3	0.0	0.0	chr12	132888474	132888538	(386771)	+	(AT)n	Simple_repeat	1	65	(0)	990113
4356	18.2	3.0	3.8	chr12	133093979	133095471	(179838)	C	HERVK-int	LTR/ERVK	(6840)	696	1	990499
8541	6.2	2.5	0.0	chr12	133095472	133096478	(178831)	C	LTR5A	LTR/ERVK	(0)	1033	1	990499
1780	12.2	0.0	5.4	chr13	18212273	18212550	(96151778)	+	AluSc8	SINE/Alu	13	275	(36)	990835
147	14.9	7.9	1.9	chr13	18212560	18212954	(96151374)	+	(TA)n	Simple_repeat	1	418	(0)	990836
16	15.3	2.0	6.0	chr13	20127770	20127818	(94236510)	+	(TGAGG)n	Simple_repeat	1	50	(0)	993808
510	26.7	2.4	1.2	chr13	20128550	20128712	(94235616)	+	MLT1D	LTR/ERVL-MaLR	32	196	(309)	993809
14	23.3	0.0	0.0	chr13	20301776	20301815	(94062513)	+	(CGCCGCT)n	Simple_repeat	1	40	(0)	994058
192	35.1	3.9	2.6	chr13	20993274	20993349	(93370979)	+	L2b	LINE/L2	3274	3350	(25)	995270
181	22.2	1.8	10.0	chr13	20993316	20993375	(93370953)	+	MIRb	SINE/MIR	214	268	(0)	995271
10430	9.2	6.2	0.1	chr13	21919733	21921214	(92443114)	C	LTR12C	LTR/ERV1	(0)	1579	1	996839
291	29.1	8.8	2.4	chr13	24384003	24384335	(89979993)	+	L1ME4c	LINE/L1	5294	5598	(568)	1000190
1311	23.0	3.9	7.0	chr13	24384372	24384768	(89979560)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	7	1000194
879	22.3	2.2	3.5	chr13	26541311	26541542	(87822786)	+	MIR	SINE/MIR	33	261	(1)	1003436
915	13.2	0.0	2.2	chr13	26541647	26541782	(87822546)	C	FLAM_C	SINE/Alu	(10)	133	1	1003437
263	29.4	14.4	0.6	chr13	26707568	26707728	(87656600)	+	MIRb	SINE/MIR	5	191	(77)	1003668
14	13.7	3.1	0.0	chr13	26708057	26708088	(87656240)	+	(CCCCTG)n	Simple_repeat	1	33	(0)	1003669
4014	17.1	4.6	6.1	chr13	27997754	27997900	(86366428)	+	L1MA6	LINE/L1	6185	6300	(0)	1005872
2147	13.6	0.0	0.3	chr13	31250167	31250474	(83113854)	C	AluSz6	SINE/Alu	(5)	307	1	1011096
21444	9.9	1.6	1.1	chr13	31250527	31253309	(83111019)	+	L1PA7	LINE/L1	422	3263	(3068)	1011097
3429	8.9	0.6	7.6	chr13	37558860	37559396	(76804932)	+	LTR3B_	LTR/ERVK	1	499	(0)	1020167
748	21.4	8.8	1.1	chr13	37559690	37559878	(76804450)	+	HERVK3-int	LTR/ERVK	28	232	(6970)	1020167
8235	22.7	9.9	2.7	chr13	38466757	38468240	(75896088)	C	L1MDa	LINE/L1	(4976)	1657	26	1021281
796	34.9	4.2	0.9	chr13	41544789	41545135	(72819193)	+	MER115	DNA/hAT-Tip100	3	361	(332)	1026013
297	31.1	7.5	0.7	chr13	41960604	41960739	(72403589)	C	MIR3	SINE/MIR	(34)	174	29	1026611
181	23.4	0.0	4.1	chr13	42788834	42788882	(71575446)	+	L2c	LINE/L2	3329	3375	(0)	1027891
16	26.2	1.8	1.8	chr13	52847304	52847359	(61516969)	+	(GCG)n	Simple_repeat	1	57	(0)	1043780
2058	13.8	0.0	0.0	chr13	54573154	54573443	(59790885)	+	AluSz	SINE/Alu	2	291	(21)	1046075
8223	20.3	3.9	4.5	chr13	57486184	57487439	(56876889)	+	L1MB1	LINE/L1	5228	6395	(9)	1049622
7686	9.1	18.4	0.2	chr13	58317811	58319099	(56045229)	C	LTR12C	LTR/ERV1	(0)	1579	3	1050613
11367	9.6	0.9	0.2	chr13	61125173	61126741	(53237587)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1054416
5481	15.9	10.7	0.3	chr13	61902819	61903829	(52460499)	+	LTR28C	LTR/ERV1	1	1129	(0)	1055341
7668	23.5	7.1	8.3	chr13	61903830	61905159	(52459169)	C	LOR1-int	LTR/ERV1	(1665)	5523	4200	1055340
2600	10.8	0.5	0.0	chr13	62327525	62327921	(52036407)	+	L1PA13	LINE/L1	5765	6163	(0)	1055866
2328	21.5	3.9	2.0	chr13	62919130	62920006	(51444322)	C	MER52A	LTR/ERV1	(422)	1333	1	1056609
5767	15.6	3.4	0.3	chr13	63517091	63518125	(50846203)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(0)	1068	1	1057390
347	36.9	0.5	2.5	chr13	63811934	63812133	(50552195)	+	L2	LINE/L2	2143	2338	(1081)	1057759
15223	10.0	2.8	1.1	chr13	64119798	64121618	(50242710)	C	L1PA5	LINE/L1	(4320)	1864	4	1058147
241	28.2	1.3	0.0	chr13	64283049	64283126	(50081202)	C	LTR80B	LTR/ERVL	(308)	276	198	1058332
34	28.2	0.0	2.6	chr13	64283135	64283152	(50081176)	+	GA-rich	Low_complexity	1	18	(0)	1058333
2294	12.5	0.3	0.0	chr13	64283153	64283463	(50080865)	+	AluSp	SINE/Alu	2	313	(0)	1058334
19	31.9	0.0	7.0	chr13	64283464	64283573	(50080755)	+	A-rich	Low_complexity	18	119	(0)	1058335
4007	15.4	1.0	6.7	chr13	64462527	64463300	(49901028)	+	LTR1F1	LTR/ERV1	1	729	(0)	1058558
257	27.3	11.5	1.8	chr13	65034257	65034420	(49329908)	C	MER52A	LTR/ERV1	(2)	1753	1572	1059252
265	21.1	0.0	1.7	chr13	65149612	65149669	(49214659)	+	MLT1B	LTR/ERVL-MaLR	1	57	(333)	1059402
2128	11.5	7.7	0.2	chr13	65149669	65150113	(49214215)	C	LTR12C	LTR/ERV1	(1096)	483	3	1059403
292	21.1	0.0	0.0	chr13	65150154	65150205	(49214123)	C	LTR40c	LTR/ERVL	(253)	212	161	1059404
10996	10.4	0.4	3.3	chr13	65387234	65388861	(48975467)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1059742
23822	7.8	1.3	0.4	chr13	65435414	65441515	(48922813)	+	L1PA6	LINE/L1	175	6316	(11)	1059820
1131	28.4	5.6	12.0	chr13	65985151	65985656	(48378672)	C	MLT1F2	LTR/ERVL-MaLR	(34)	526	60	1060480
1623	12.0	12.6	0.8	chr13	65985657	65985915	(48378413)	+	AluSq	SINE/Alu	1	294	(19)	1060481
1131	28.4	5.6	12.0	chr13	65985916	65985968	(48378360)	C	MLT1F2	LTR/ERVL-MaLR	(501)	59	5	1060480
7324	13.3	2.5	0.4	chr13	66684990	66686106	(47678222)	+	THE1C-int	LTR/ERVL-MaLR	491	1631	(0)	1061331
7865	7.0	19.8	0.2	chr13	68170797	68172063	(46192265)	+	LTR12C	LTR/ERV1	3	1579	(0)	1063192
21482	10.7	4.8	2.3	chr13	68257765	68261389	(46102939)	+	MER61-int	LTR/ERV1	1411	5206	(11)	1063312
745	32.3	4.7	1.5	chr13	68261390	68261401	(46102927)	+	L1MEc	LINE/L1	3433	3443	(2876)	1063309
2086	12.9	1.8	1.2	chr13	68261402	68261738	(46102590)	+	MER61A	LTR/ERV1	3	341	(0)	1063313
745	32.3	4.7	1.5	chr13	68261739	68262133	(46102195)	+	L1MEc	LINE/L1	3444	3854	(2465)	1063309
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
293	28.8	2.1	8.9	chr13	70204075	70204191	(44160137)	+	L1ME3D	LINE/L1	6073	6123	(0)	1065828
614	27.8	11.9	1.9	chr13	71696978	71697248	(42667080)	+	L2a	LINE/L2	3120	3421	(5)	1067794
1546	18.9	3.4	9.6	chr13	72308938	72309119	(42055209)	+	MLT1B	LTR/ERVL-MaLR	1	181	(209)	1068615
1732	18.5	0.4	0.0	chr13	72309120	72309395	(42054933)	+	AluJb	SINE/Alu	5	281	(31)	1068616
1546	18.9	3.4	9.6	chr13	72309396	72309627	(42054701)	+	MLT1B	LTR/ERVL-MaLR	182	388	(2)	1068615
2184	9.4	4.7	0.7	chr13	72598209	72598495	(41765833)	+	AluSq2	SINE/Alu	1	299	(14)	1069034
225	28.4	4.3	0.0	chr13	73636322	73636388	(40727940)	+	MIR3	SINE/MIR	89	158	(50)	1070861
20	0.0	0.0	0.0	chr13	73636401	73636422	(40727906)	+	(T)n	Simple_repeat	1	22	(0)	1070862
27273	3.1	3.4	0.1	chr13	74536449	74542369	(39821959)	+	L1PA3	LINE/L1	1	6150	(5)	1072076
7092	17.6	7.9	4.7	chr13	78168291	78169855	(36194473)	C	MER52D	LTR/ERV1	(0)	2123	505	1077162
3228	8.8	1.6	0.2	chr13	80397537	80397967	(33966361)	+	LTR3B	LTR/ERVK	1	437	(0)	1080305
765	21.2	9.2	1.0	chr13	80398079	80398278	(33966050)	+	HERVK3-int	LTR/ERVK	15	232	(6970)	1080305
3216	16.5	5.6	0.3	chr13	82072250	82072827	(32291501)	+	MER50	LTR/ERV1	1	610	(124)	1082303
1366	13.4	0.0	0.0	chr13	84350933	84351118	(30013210)	+	AluSx1	SINE/Alu	1	186	(126)	1085133
1640	27.1	2.8	0.5	chr13	84351152	84351573	(30012755)	C	MER70B	LTR/ERVL	(143)	435	4	1085134
1433	8.8	2.0	0.0	chr13	84869543	84869736	(29494592)	+	LTR14C	LTR/ERVK	390	587	(0)	1085796
17836	5.5	0.4	0.1	chr13	84869737	84871933	(29492395)	+	HERVK14C-int	LTR/ERVK	1	2202	(5232)	1085796
2154	7.2	2.7	0.0	chr13	85362661	85362951	(29001377)	C	L1PA8	LINE/L1	(3)	6169	5871	1086445
5542	11.7	16.8	5.3	chr13	85362955	85364056	(29000272)	+	LTR12D	LTR/ERV1	1	1254	(0)	1086446
16189	16.5	3.7	2.1	chr13	86185536	86188371	(28175957)	+	HUERS-P2-int	LTR/ERV1	208	3088	(0)	1087454
3536	13.8	0.9	0.0	chr13	91242996	91243530	(23120798)	C	MER66C	LTR/ERV1	(14)	541	2	1093978
2302	18.0	14.5	6.0	chr13	100408674	100409319	(13955009)	C	MER61-int	LTR/ERV1	(4517)	700	1	1107911
1490	16.0	9.7	1.3	chr13	100409322	100409632	(13954696)	C	MER61A	LTR/ERV1	(1)	340	1	1107911
518	17.7	0.0	1.0	chr13	100409633	100409729	(13954599)	C	MSTA	LTR/ERVL-MaLR	(330)	96	1	1107910
2159	14.8	11.3	14.3	chr13	112722054	112722691	(1641637)	C	MER4B	LTR/ERV1	(10)	890	1	1123869
21036	17.4	1.4	1.6	chr14	24011391	24015051	(83028667)	C	HERVK-int	LTR/ERVK	(3880)	3656	1	1133650
5820	7.7	0.3	0.1	chr14	24015052	24015776	(83027942)	C	LTR5A	LTR/ERVK	(0)	1033	308	1133650
181	37.4	4.1	9.6	chr14	25761351	25761539	(81282179)	+	L2	LINE/L2	2363	2525	(894)	1135960
892	23.4	8.6	8.6	chr14	25761540	25761913	(81281805)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	1135961
181	37.4	4.1	9.6	chr14	25761914	25762057	(81281661)	+	L2	LINE/L2	2526	2676	(743)	1135960
205	21.9	1.5	9.9	chr14	31208260	31208330	(75835388)	C	MIRb	SINE/MIR	(82)	186	122	1143147
6479	8.8	17.0	9.2	chr14	31711544	31712689	(75331029)	C	LTR12D	LTR/ERV1	(0)	1254	1	1144071
2527	15.1	0.9	6.2	chr14	31712694	31713179	(75330539)	C	LOR1a	LTR/ERV1	(0)	497	38	1144072
5154	11.1	5.0	3.4	chr14	34693173	34693995	(72349723)	+	LTR1A2	LTR/ERV1	1	837	(0)	1148450
227	32.5	0.0	1.3	chr14	34694070	34694147	(72349571)	+	MamSINE1	SINE/tRNA-RTE	196	272	(18)	1148451
14	0.0	0.0	0.0	chr14	36320608	36320625	(70723093)	+	(CCA)n	Simple_repeat	1	18	(0)	1151418
16	21.4	0.0	2.2	chr14	37585141	37585185	(69458533)	+	(CCCTC)n	Simple_repeat	1	45	(0)	1153163
595	26.4	2.2	1.1	chr14	39228516	39228691	(67815027)	+	LTR33	LTR/ERVL	7	184	(331)	1155397
481	21.2	8.7	9.6	chr14	39228726	39228934	(67814784)	+	LTR33	LTR/ERVL	307	513	(2)	1155397
6900	18.1	7.4	3.0	chr14	39440850	39442642	(67601076)	+	LTR2752	LTR/ERV1	1	1343	(412)	1155735
28396	12.4	2.6	2.3	chr14	42313409	42313678	(64730040)	C	HERVK9-int	LTR/ERVK	(2089)	280	1	1159158
3909	7.5	0.6	0.4	chr14	42313679	42314189	(64729529)	C	MER9a3	LTR/ERVK	(0)	512	1	1159161
48	9.1	0.0	0.0	chr14	45715497	45715567	(61328151)	+	(TGCTAGTCTT)n	Simple_repeat	1	71	(0)	1163460
40	6.3	0.0	0.0	chr14	45715630	45715680	(61328038)	+	(TATCTCTATT)n	Simple_repeat	1	51	(0)	1163461
3324	10.3	1.0	3.5	chr14	45715771	45716282	(61327436)	C	LTR3B_	LTR/ERVK	(0)	499	1	1163462
9352	9.8	4.4	0.2	chr14	52180632	52182014	(54861704)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	136	1172553
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
1983	16.0	3.6	2.2	chr14	55565206	55565564	(51478154)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1177938
615	2.7	0.0	0.0	chr14	58239894	58239967	(48803751)	C	tRNA-Lys-AAG	tRNA	(2)	74	1	1181896
3567	18.2	5.8	7.5	chr14	66944231	66945086	(40098632)	C	MER61-int	LTR/ERV1	(4376)	841	1	1195227
1382	18.3	0.6	4.1	chr14	66945098	66945419	(40098299)	C	MER61B	LTR/ERV1	(29)	398	1	1195227
1417	9.0	0.0	2.3	chr14	66945421	66945636	(40098082)	+	L1PB1	LINE/L1	5940	6150	(1)	1195229
1530	24.5	5.1	4.9	chr14	70425417	70426004	(36617714)	C	HERV3-int	LTR/ERV1	(5709)	622	34	1201198
1925	18.2	3.2	1.6	chr14	70426078	70426450	(36617268)	C	MER34D	LTR/ERV1	(52)	527	149	1201199
3266	19.6	3.4	5.0	chr14	72032451	72032965	(35010753)	C	L1MB2	LINE/L1	(0)	6407	5883	1203691
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
245	15.8	13.6	0.0	chr14	77953822	77953878	(29089840)	C	L2c	LINE/L2	(2)	3385	3320	1215342
12	17.7	3.1	0.0	chr14	77953895	77953926	(29089792)	+	G-rich	Low_complexity	1	33	(0)	1215343
228	31.4	0.0	2.8	chr14	77954035	77954106	(29089612)	C	Charlie13b	DNA/hAT-Charlie	(432)	80	11	1215341
1882	8.5	9.7	1.4	chr14	89333495	89333776	(17709942)	+	AluSx	SINE/Alu	2	309	(3)	1231884
5130	14.9	2.2	11.7	chr14	89333777	89333966	(17709752)	+	L1MA9	LINE/L1	5612	5784	(528)	1231882
299	34.9	2.6	6.4	chr14	89625937	89626138	(17417580)	+	MIRb	SINE/MIR	28	221	(47)	1232411
641	19.3	6.5	0.0	chr14	89626278	89626422	(17417296)	+	L1MD3	LINE/L1	7793	7947	(48)	1232412
1903	19.3	2.2	1.6	chr14	89668826	89669188	(17374530)	C	MLT2D	LTR/ERVL	(48)	366	2	1232500
333	24.3	5.9	0.0	chr14	89669200	89669343	(17374375)	C	LTR16C	LTR/ERVL	(25)	464	312	1232501
271	25.6	4.9	1.3	chr14	89669394	89669472	(17374246)	C	LTR16C	LTR/ERVL	(330)	159	78	1232501
5468	7.6	2.2	0.7	chr14	90238596	90239349	(16804369)	+	MER4E	LTR/ERV1	1	766	(0)	1233538
4725	14.7	1.9	5.7	chr14	90239351	90240078	(16803640)	+	MER4B-int	LTR/ERV1	2	719	(6039)	1233538
1138	29.8	9.6	1.3	chr14	95843058	95843601	(11200117)	+	L1MC5	LINE/L1	8707	9300	(4)	1243819
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
2318	8.6	1.3	1.6	chr14	99736139	99736451	(7307267)	+	AluSx1	SINE/Alu	1	312	(0)	1250528
1558	19.9	7.4	0.0	chr14	99736460	99736746	(7306972)	+	AluJb	SINE/Alu	1	310	(2)	1250529
6654	20.2	4.8	2.2	chr14	101638010	101639584	(5404134)	+	Charlie17	DNA/hAT-Charlie	471	2088	(828)	1253436
279	35.3	3.6	1.5	chr14	104245684	104245818	(2797900)	C	MIR	SINE/MIR	(109)	153	16	1258225
30	3.1	0.0	0.0	chr14	104342231	104342263	(2701455)	+	(GGGGC)n	Simple_repeat	1	33	(0)	1258326
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
721	15.2	0.0	0.8	chr15	22223102	22223226	(79767963)	C	AluJo	SINE/Alu	(188)	124	1	1265461
825	20.2	10.8	1.8	chr15	27766773	27766999	(74224190)	+	LTR32	LTR/ERVL	157	406	(51)	1273034
2700	6.9	4.7	0.0	chr15	27767028	27767374	(74223815)	+	HERV9-int	LTR/ERV1	8073	8436	(0)	1273035
3737	13.3	3.7	0.0	chr15	27817211	27817789	(74173400)	+	LTR26	LTR/ERV1	3	603	(0)	1273085
1582	27.2	4.8	0.2	chr15	28868398	28868854	(73122335)	C	LTR33	LTR/ERVL	(0)	515	37	1274661
1884	30.3	4.3	9.5	chr15	28869041	28869391	(73121798)	C	ERVL-E-int	LTR/ERVL	(3212)	2455	2111	1274662
2374	6.8	0.3	0.3	chr15	28869392	28869687	(73121502)	C	AluY	SINE/Alu	(15)	296	1	1274663
2037	21.6	9.4	0.6	chr15	40486323	40486843	(61504346)	+	L1M3f	LINE/L1	1	572	(4756)	1291262
1352	14.8	0.0	2.8	chr15	40486962	40487178	(61504011)	+	AluSz	SINE/Alu	1	211	(101)	1291263
427	9.3	0.0	0.0	chr15	40487185	40487238	(61503951)	+	FLAM_A	SINE/Alu	81	134	(8)	1291264
63138	4.2	0.4	0.2	chr15	45235064	45242440	(56748749)	C	HERVK14C-int	LTR/ERVK	(0)	7434	47	1300294
680	14.4	1.6	4.5	chr15	45242441	45242486	(56748703)	C	AluSx	SINE/Alu	(183)	129	89	1300295
4884	5.5	0.2	0.2	chr15	45242487	45243073	(56748116)	C	LTR14C	LTR/ERVK	(0)	587	1	1300296
687	9.9	1.0	1.9	chr15	55135242	55135344	(46855845)	+	L1P3	LINE/L1	3	104	(6357)	1315016
23585	12.5	2.2	1.5	chr15	55135360	55137703	(46853486)	+	L1PA7	LINE/L1	465	4486	(3655)	1315017
398	31.5	12.4	5.2	chr15	57837806	57838266	(44152923)	+	L1M5	LINE/L1	5307	5808	(315)	1319272
2446	8.8	0.0	0.3	chr15	62216201	62216485	(39774704)	+	AluY	SINE/Alu	1	284	(27)	1326533
38	2.6	0.0	0.0	chr15	62216486	62216525	(39774664)	+	(AAAT)n	Simple_repeat	1	40	(0)	1326534
12050	7.5	0.6	0.7	chr15	62216526	62216710	(39774479)	C	HERVK14-int	LTR/ERVK	(5911)	185	2	1326530
2231	7.9	0.6	17.4	chr15	62216712	62217124	(39774065)	C	LTR14A	LTR/ERVK	(1)	343	1	1326530
203	33.3	8.9	3.1	chr15	67070471	67070597	(34920592)	C	L2a	LINE/L2	(1)	3425	3291	1336019
22	24.8	0.0	5.9	chr15	79560547	79560631	(22430558)	+	(GGCGG)n	Simple_repeat	1	85	(0)	1358032
14	21.5	8.5	0.0	chr15	79560605	79560663	(22430526)	+	(GGCCCG)n	Simple_repeat	1	64	(0)	1358033
4427	16.9	2.7	2.3	chr15	81979660	81980514	(20010675)	C	L1MC3	LINE/L1	(223)	7562	6705	1362135
12	14.1	0.0	8.1	chr15	82647385	82647421	(19343768)	+	(CCCG)n	Simple_repeat	1	37	(0)	1363212
19	17.7	0.0	10.3	chr15	82680391	82680468	(19310721)	+	G-rich	Low_complexity	1	78	(0)	1363260
249	28.9	9.1	0.0	chr15	88452652	88452741	(13538448)	C	MARNA	DNA/TcMar-Mariner	(63)	523	425	1372423
262	26.3	11.6	0.9	chr15	89378368	89378482	(12612707)	+	MIRb	SINE/MIR	134	262	(6)	1374115
13	29.2	6.1	1.1	chr15	90036190	90036271	(11954918)	+	(CTCCCT)n	Simple_repeat	1	87	(0)	1375471
2033	10.0	4.4	0.0	chr15	99948299	99948579	(2042610)	C	AluSg7	SINE/Alu	(15)	294	1	1390841
5375	12.8	5.0	1.0	chr15	99948616	99948938	(2042251)	C	L1MA8	LINE/L1	(20)	6769	6435	1390842
192	24.5	10.2	3.6	chr15	100133208	100133317	(1857872)	+	L2b	LINE/L2	3231	3348	(27)	1391046
215	29.1	13.9	0.8	chr15	100133593	100133772	(1857417)	C	L2c	LINE/L2	(64)	3311	3099	1391042
1648	24.9	11.6	0.2	chr15	100306189	100306706	(1684483)	+	MLT1G	LTR/ERVL-MaLR	7	591	(0)	1391277
24	9.9	8.1	6.2	chr15	101766319	101766392	(224797)	+	(CT)n	Simple_repeat	1	80	(0)	1393237
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
17	17.0	2.5	0.0	chr16	1965349	1965388	(88372957)	+	(CTGACCC)n	Simple_repeat	1	41	(0)	1396722
257	25.2	6.4	7.2	chr16	1981660	1981770	(88356575)	C	MIRb	SINE/MIR	(28)	240	131	1396742
1570	24.2	0.0	0.0	chr16	2927166	2927483	(87410862)	+	HERVK-int	LTR/ERVK	847	1164	(6372)	1398199
1113	14.9	0.0	0.0	chr16	2927480	2927660	(87410685)	+	HERVK-int	LTR/ERVK	1638	1818	(5718)	1398199
572	9.3	0.0	0.0	chr16	2927662	2927736	(87410609)	+	tRNA-Lys-AAG	tRNA	2	76	(0)	1398200
6447	13.8	2.2	0.4	chr16	2927739	2928722	(87409623)	C	LTR5B	LTR/ERVK	(0)	1002	1	1398201
1296	24.7	6.4	5.0	chr16	4649288	4649747	(85688598)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1401608
847	31.7	4.6	4.6	chr16	8783194	8783543	(81554802)	C	L2c	LINE/L2	(0)	3387	3038	1409861
1640	23.4	1.9	3.7	chr16	10100909	10101338	(80237007)	+	ERV3-16A3_LTR	LTR/ERVL	1	422	(0)	1412687
232	34.2	0.0	0.0	chr16	12344620	12344692	(77993653)	+	MIR	SINE/MIR	188	260	(2)	1417736
13	13.7	0.0	0.0	chr16	12344713	12344737	(77993608)	+	(TCC)n	Simple_repeat	1	25	(0)	1417737
358	28.6	0.7	0.7	chr16	12345251	12345380	(77992965)	+	MIR	SINE/MIR	43	176	(92)	1417738
62572	4.7	0.6	0.1	chr16	19394167	19401565	(70936780)	C	HERVK14C-int	LTR/ERVK	(0)	7434	1	1433467
5023	4.9	0.0	0.0	chr16	19401566	19402152	(70936193)	C	LTR14C	LTR/ERVK	(0)	587	1	1433467
2007	15.5	27.4	4.0	chr16	19406960	19407532	(70930813)	C	MER61-int	LTR/ERV1	(4510)	707	1	1433470
1774	18.5	2.6	0.6	chr16	19407533	19407864	(70930481)	C	MER61A	LTR/ERV1	(0)	341	3	1433470
795	18.2	1.3	2.6	chr16	19407866	19408017	(70930328)	C	MIR	SINE/MIR	(106)	156	7	1433471
7670	7.5	7.8	0.2	chr16	21629456	21630507	(68707838)	C	LTR12D	LTR/ERV1	(115)	1139	1	1438291
6546	5.6	0.5	0.4	chr16	21630508	21631301	(68707044)	C	HERV9NC-int	LTR/ERV1	(0)	8436	7642	1438291
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
11	13.0	8.8	0.0	chr16	29613511	29613544	(60724801)	+	(CGCCCT)n	Simple_repeat	1	37	(0)	1456097
3974	7.7	0.8	0.2	chr16	31539720	31540228	(58798117)	+	MER9a3	LTR/ERVK	1	512	(0)	1460535
4430	7.1	2.4	0.3	chr16	31540229	31540796	(58797549)	+	HERVK9-int	LTR/ERVK	1	580	(5441)	1460535
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
4613	16.7	1.9	2.0	chr16	47492020	47492858	(42845487)	C	MER61-int	LTR/ERV1	(4377)	840	3	1467253
1671	19.9	2.6	0.6	chr16	47492860	47493193	(42845152)	C	MER61A	LTR/ERV1	(0)	341	1	1467253
6004	13.7	1.7	3.5	chr16	54904246	54906008	(35432337)	+	L1MC1	LINE/L1	2624	5505	(816)	1480369
1716	16.3	1.4	1.4	chr16	54906009	54906302	(35432043)	+	AluJb	SINE/Alu	11	304	(8)	1480375
6004	15.3	1.4	8.4	chr16	54906303	54906391	(35431954)	+	L1MC1	LINE/L1	5506	5574	(2596)	1480369
2847	11.5	2.0	0.0	chr16	54906365	54906806	(35431539)	+	L1MB1	LINE/L1	4820	5270	(870)	1480376
1098	22.4	8.7	8.4	chr16	58388980	58389431	(31948914)	C	L2a	LINE/L2	(216)	3210	2527	1486990
247	10.9	0.0	2.1	chr16	58389463	58389509	(31948836)	+	Charlie10	DNA/hAT-Charlie	2563	2608	(214)	1486993
268	30.1	2.7	0.0	chr16	58389650	58389722	(31948623)	+	MLT1G	LTR/ERVL-MaLR	130	204	(387)	1486994
1371	27.9	4.8	6.1	chr16	68524771	68525038	(21813307)	+	L1MD2	LINE/L1	5771	6043	(316)	1503698
566	22.7	1.5	0.8	chr16	72651301	72651429	(17686916)	C	L1MEb	LINE/L1	(4626)	1574	1445	1511801
28	2.9	2.9	0.0	chr16	72651439	72651473	(17686872)	+	(ATTT)n	Simple_repeat	1	36	(0)	1511802
1250	10.9	1.2	0.0	chr16	72651474	72651638	(17686707)	C	AluYh3	SINE/Alu	(29)	282	116	1511803
260	37.5	7.0	3.5	chr16	81965867	81966322	(8372023)	+	L1M5	LINE/L1	2272	2744	(3402)	1528412
354	31.4	8.8	3.1	chr16	81966498	81966658	(8371687)	+	L1M5	LINE/L1	2990	3160	(2986)	1528412
278	24.7	13.8	0.0	chr16	84547482	84547562	(5790783)	+	MIRb	SINE/MIR	57	150	(118)	1533041
12	11.5	3.3	3.2	chr16	84548063	84548092	(5790253)	+	(ACCC)n	Simple_repeat	1	31	(0)	1533042
29	34.8	0.0	1.0	chr16	86153626	86153725	(4184620)	+	(AT)n	Simple_repeat	1	100	(0)	1536142
420	27.0	0.0	0.0	chr16	86153749	86153859	(4184486)	C	L1MB8	LINE/L1	(0)	6178	6068	1536143
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
2144	6.3	4.7	5.3	chr16	87387529	87387830	(2950515)	+	AluY	SINE/Alu	1	300	(11)	1538348
300	20.8	5.1	3.0	chr16	88904773	88904876	(1433469)	+	MIR3	SINE/MIR	61	162	(46)	1540576
328	5.7	1.2	3.4	chr17	113094	113583	(83143858)	+	(ACCCTA)n	Simple_repeat	1	496	(0)	1544650
2157	11.3	3.5	0.0	chr17	1144747	1145047	(82112394)	+	AluSx1	SINE/Alu	1	312	(0)	1546434
241	32.1	1.2	2.4	chr17	1145140	1145222	(82112219)	+	L2b	LINE/L2	3288	3369	(6)	1546435
13	14.7	2.3	6.8	chr17	2749432	2749474	(80507967)	+	(GGCCG)n	Simple_repeat	1	44	(0)	1549846
22	25.0	2.2	4.3	chr17	2749665	2749756	(80507685)	+	GA-rich	Low_complexity	1	94	(0)	1549847
790	12.6	3.2	2.7	chr17	6749515	6749702	(76507739)	+	L1MEi	LINE/L1	2002	2190	(4052)	1557639
256	30.1	15.0	2.9	chr17	9546226	9546365	(73711076)	+	MIR3	SINE/MIR	21	180	(28)	1562913
2421	7.9	0.0	0.3	chr17	9546592	9546894	(73710547)	C	AluSc	SINE/Alu	(5)	304	3	1562914
1499	13.2	3.9	4.7	chr17	10616525	10616629	(72640812)	+	AluJb	SINE/Alu	142	255	(57)	1564971
12	12.2	3.7	0.0	chr17	13033144	13033170	(70224271)	+	(ACAA)n	Simple_repeat	1	28	(0)	1569085
326	16.2	26.7	1.3	chr17	14383665	14383820	(68873621)	+	L2a	LINE/L2	3217	3426	(0)	1571338
2161	10.7	0.3	4.7	chr17	14383868	14384185	(68873256)	C	AluSz	SINE/Alu	(8)	304	1	1571339
499	26.9	2.9	0.7	chr17	16428594	16428728	(66828713)	C	MIRc	SINE/MIR	(39)	229	92	1574970
17	21.0	4.5	0.0	chr17	18698261	18698304	(64559137)	+	(GT)n	Simple_repeat	1	46	(0)	1578957
381	28.6	4.5	1.8	chr17	18698564	18698734	(64558707)	+	MIRb	SINE/MIR	91	266	(2)	1578958
13	17.1	5.9	6.9	chr17	19867480	19867547	(63389894)	+	G-rich	Low_complexity	1	72	(0)	1581429
14	21.8	0.0	4.3	chr17	19867617	19867662	(63389779)	+	(GGCCC)n	Simple_repeat	1	46	(0)	1581430
13	17.7	5.3	0.0	chr17	19868095	19868132	(63389309)	+	G-rich	Low_complexity	1	40	(0)	1581431
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1959	15.2	0.7	1.0	chr17	27812710	27813012	(55444429)	C	AluJo	SINE/Alu	(10)	302	1	1587462
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
2343	10.2	1.0	0.0	chr17	38276318	38276622	(44980819)	+	AluSz	SINE/Alu	1	308	(4)	1607525
46	0.0	0.0	0.0	chr17	38276801	38276839	(44980602)	+	(AC)n	Simple_repeat	1	39	(0)	1607526
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
3184	22.7	4.2	1.6	chr17	43332947	43333690	(39923751)	C	HERVK13-int	LTR/ERVK	(7352)	764	1	1617608
6245	12.9	4.2	2.9	chr17	43333691	43334680	(39922761)	C	LTR13	LTR/ERVK	(0)	1007	5	1617608
3068	23.0	2.7	1.5	chr17	43347911	43348633	(39908808)	C	HERVK13-int	LTR/ERVK	(7384)	732	1	1617611
7753	9.0	1.4	0.0	chr17	43348634	43349626	(39907815)	C	LTR13	LTR/ERVK	(0)	1007	1	1617611
6499	18.2	3.2	1.9	chr17	44565321	44566500	(38690941)	C	HUERS-P2-int	LTR/ERV1	(1539)	1549	355	1620218
13	21.7	7.5	0.0	chr17	45584880	45584932	(37672509)	+	(GGCAGC)n	Simple_repeat	1	57	(0)	1622332
2364	9.9	0.6	1.3	chr17	45947374	45947687	(37309754)	C	AluSx1	SINE/Alu	(0)	312	1	1623096
14	17.6	0.0	0.0	chr17	47253758	47253789	(36003652)	+	(CCCTC)n	Simple_repeat	1	32	(0)	1625666
2030	6.7	8.9	0.0	chr17	47492834	47493100	(35764341)	+	AluSx	SINE/Alu	1	293	(19)	1626105
2088	9.5	0.3	0.0	chr17	61339497	61339780	(21917661)	+	AluSx	SINE/Alu	13	297	(15)	1650908
1969	17.9	8.1	9.0	chr17	64637426	64637574	(18619867)	C	L1MB7	LINE/L1	(1100)	5046	4915	1656951
2152	15.2	0.0	0.0	chr17	64637575	64637863	(18619578)	C	AluSz	SINE/Alu	(23)	289	1	1656957
1969	17.9	8.1	9.0	chr17	64637864	64638035	(18619406)	C	L1MB7	LINE/L1	(1232)	4914	4764	1656951
2250	11.8	0.3	0.0	chr17	64842676	64842981	(18414460)	+	AluSx	SINE/Alu	1	307	(5)	1657432
232	28.6	9.0	0.0	chr17	65171184	65171274	(18086167)	C	L2a	LINE/L2	(1)	3425	3326	1658132
506	28.5	7.6	0.0	chr17	65171254	65171411	(18086030)	C	MIR	SINE/MIR	(0)	262	92	1658133
6294	17.7	8.3	1.7	chr17	68879706	68880938	(14376503)	+	MER52A	LTR/ERV1	434	1755	(0)	1664929
2006	14.3	0.0	0.3	chr17	69200726	69201012	(14056429)	C	AluJb	SINE/Alu	(26)	286	1	1665357
13	9.8	0.0	0.0	chr17	70131970	70131991	(13125450)	+	(TGT)n	Simple_repeat	1	22	(0)	1666841
308	28.8	9.7	4.1	chr17	72193630	72193774	(11063667)	C	MIRc	SINE/MIR	(3)	265	112	1669959
2212	7.8	0.3	1.0	chr17	72563316	72563621	(10693820)	C	AluSx4	SINE/Alu	(2)	308	5	1670607
271	18.0	0.0	0.0	chr17	72591350	72591399	(10666042)	C	L2a	LINE/L2	(2)	3424	3375	1670652
1903	31.4	8.5	4.9	chr17	78558837	78560236	(4697205)	+	L2a	LINE/L2	1974	3426	(0)	1682038
2386	10.0	0.0	0.0	chr17	78860755	78861055	(4396386)	+	AluSz	SINE/Alu	2	302	(10)	1682579
293	35.4	3.3	0.7	chr17	78861309	78861456	(4395985)	+	L2c	LINE/L2	3226	3377	(10)	1682580
469	33.1	7.6	4.0	chr17	79711731	79712108	(3545333)	+	L1MC5a	LINE/L1	2109	2501	(276)	1683792
20	7.9	0.0	0.0	chr17	81395099	81395125	(1862316)	+	(TG)n	Simple_repeat	1	27	(0)	1686226
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1390	21.8	7.9	1.4	chr17	83246582	83247135	(10306)	C	L1MC	LINE/L1	(2239)	5546	4952	1688732
167	14.0	0.3	2.0	chr17	83247136	83247436	(10005)	+	(GTTAGG)n	Simple_repeat	1	302	(0)	1688733
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
2635	13.2	8.4	5.7	chr18	9304541	9305069	(71068216)	C	LTR10A	LTR/ERV1	(64)	545	1	1702794
5082	9.8	1.4	0.3	chr18	10224796	10225480	(70147805)	C	HERVK9-int	LTR/ERVK	(5328)	693	1	1704275
3715	7.9	4.1	0.0	chr18	10225481	10225971	(70147314)	C	MER9a3	LTR/ERVK	(0)	512	1	1704275
12913	8.7	1.4	6.2	chr18	21735088	21738525	(58634760)	+	L1P2	LINE/L1	3	3400	(3061)	1713214
516	28.5	11.0	6.4	chr18	25972934	25973297	(54399988)	C	L1ME4a	LINE/L1	(481)	5643	5209	1720103
4702	7.6	0.0	0.0	chr18	25973585	25974138	(54399147)	C	MER41A	LTR/ERV1	(0)	554	1	1720105
240	31.7	15.8	3.8	chr18	25988452	25988661	(54384624)	C	MLT1K	LTR/ERVL-MaLR	(317)	278	39	1720139
12	19.7	0.0	0.0	chr18	25988714	25988742	(54384543)	+	(CCCTC)n	Simple_repeat	1	29	(0)	1720140
2149	19.2	18.3	5.0	chr18	29883683	29884298	(50488987)	C	MER61-int	LTR/ERV1	(4517)	700	3	1725597
1513	16.7	5.3	4.7	chr18	29884301	29884639	(50488646)	C	MER61A	LTR/ERV1	(0)	341	1	1725597
361	27.9	10.1	2.4	chr18	30034602	30034960	(50338325)	C	L1MC5a	LINE/L1	(295)	5828	5617	1725787
6996	10.8	0.4	0.1	chr18	30034962	30035928	(50337357)	+	THE1B-int	LTR/ERVL-MaLR	611	1580	(0)	1725788
643	27.1	6.4	1.8	chr18	30713303	30713524	(49659761)	+	MER34B-int	LTR/ERV1	41	273	(5083)	1726717
247	22.0	2.5	17.5	chr18	31458757	31458899	(48914386)	+	MER91A	DNA/hAT-Tip100	42	162	(34)	1727704
18	15.4	0.0	0.0	chr18	31762066	31762101	(48611184)	+	(TTTGT)n	Simple_repeat	1	36	(0)	1728159
187	35.7	15.7	4.3	chr18	31762242	31762737	(48610548)	+	L2b	LINE/L2	2758	3321	(54)	1728160
2908	10.2	4.7	0.0	chr18	32037642	32038043	(48335242)	+	LTR12F	LTR/ERV1	1	422	(97)	1728696
2241	11.2	0.3	0.3	chr18	32038044	32038348	(48334937)	C	AluSz6	SINE/Alu	(7)	305	1	1728697
806	29.4	11.6	5.1	chr18	33519870	33520461	(46852824)	+	L1MEh	LINE/L1	625	1256	(979)	1730844
1341	24.1	5.2	0.9	chr18	33520462	33520809	(46852476)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	2	1730845
311	22.9	7.9	2.8	chr18	33566234	33566341	(46806944)	C	MER61-int	LTR/ERV1	(6336)	755	642	1730890
730	17.8	4.0	4.6	chr18	33566378	33566530	(46806755)	C	MER61-int	LTR/ERV1	(5064)	153	2	1730890
1864	19.5	6.5	1.7	chr18	33566531	33566942	(46806343)	C	MER61C	LTR/ERV1	(0)	428	7	1730890
336	34.7	13.0	1.4	chr18	34942989	34943280	(45430005)	+	L2	LINE/L2	2659	2989	(430)	1732628
6403	15.6	3.4	3.5	chr18	36047285	36048063	(44325222)	+	L1MDa	LINE/L1	3337	4120	(2417)	1734194
2453	8.0	1.0	0.0	chr18	36048064	36048365	(44324920)	C	AluSp	SINE/Alu	(8)	305	1	1734198
6403	15.6	3.4	3.5	chr18	36048366	36048931	(44324354)	+	L1MDa	LINE/L1	4121	4681	(1856)	1734194
1846	16.9	1.0	0.7	chr18	36577299	36577600	(43795685)	C	AluSz6	SINE/Alu	(9)	303	1	1734962
346	30.0	0.0	0.0	chr18	36577601	36577692	(43795593)	C	MIRb	SINE/MIR	(45)	223	132	1734961
462	38.3	7.8	2.0	chr18	43129080	43129431	(37243854)	C	L3	LINE/CR1	(207)	3892	3519	1743796
8441	18.4	6.0	0.7	chr18	43952347	43953901	(36419384)	+	MSTB-int	LTR/ERVL-MaLR	3	1645	(6)	1744891
6316	13.4	1.8	0.6	chr18	46088310	46089299	(34283986)	+	LTR5B	LTR/ERVK	1	1002	(0)	1747966
579	7.0	0.0	0.0	chr18	46089302	46089372	(34283913)	C	tRNA-Lys-AAG	tRNA	(0)	76	6	1747967
414	3.8	3.6	0.0	chr18	46089373	46089425	(34283860)	+	LTR5B	LTR/ERVK	948	1002	(0)	1747968
3445	14.4	3.3	0.8	chr18	48930755	48931342	(31441943)	+	L1MB3	LINE/L1	5581	6183	(0)	1752691
349	28.9	4.4	6.8	chr18	48931406	48931568	(31441717)	+	Charlie4z	DNA/hAT-Charlie	7	165	(2)	1752692
1917	21.0	15.1	9.5	chr18	51274883	51275629	(29097656)	+	MER21B	LTR/ERVL	13	808	(60)	1756673
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1903	16.6	4.7	0.6	chr18	59202527	59202853	(21170432)	+	MER61A	LTR/ERV1	1	341	(0)	1768605
20974	14.0	3.7	2.6	chr18	59202854	59205664	(21167621)	+	MER61-int	LTR/ERV1	2201	6061	(1144)	1768605
2293	7.2	0.4	0.0	chr18	62503958	62504236	(17869049)	+	AluSq4	SINE/Alu	1	280	(31)	1773565
1409	19.4	4.4	14.4	chr18	62504237	62504411	(17868874)	C	MSTB1	LTR/ERVL-MaLR	(257)	175	47	1773564
2201	6.5	7.1	1.7	chr18	62504412	62504704	(17868581)	C	AluSg	SINE/Alu	(0)	310	1	1773566
11	20.5	5.1	0.0	chr18	63588342	63588380	(16784905)	+	(AGAGAC)n	Simple_repeat	1	41	(0)	1775327
2033	24.1	8.9	3.8	chr18	70353598	70354335	(10018950)	+	L1MEf	LINE/L1	811	1655	(4760)	1784444
2198	12.5	0.0	0.0	chr18	70354336	70354643	(10018642)	C	AluSq2	SINE/Alu	(0)	313	2	1784446
2033	23.9	7.1	3.7	chr18	70354644	70354795	(10018490)	+	L1MEf	LINE/L1	1621	1779	(4636)	1784444
408	31.1	3.3	1.7	chr18	73219196	73219375	(7153910)	+	L1MEg	LINE/L1	37	219	(5865)	1788259
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
1937	15.4	0.3	0.3	chr19	3517109	3517400	(55100216)	+	AluJb	SINE/Alu	2	293	(19)	1803465
282	21.5	0.3	0.0	chr19	5688203	5688268	(52929348)	C	MIRc	SINE/MIR	(74)	156	88	1808590
4085	17.3	4.3	4.6	chr19	6291798	6292476	(52325140)	+	MER52-int	LTR/ERV1	801	1487	(5604)	1809823
16	15.9	0.0	0.0	chr19	6503070	6503095	(52114521)	+	(TATCTA)n	Simple_repeat	1	26	(0)	1810411
2347	8.6	0.0	0.7	chr19	6503096	6503396	(52114220)	C	AluSp	SINE/Alu	(14)	299	1	1810412
2424	9.0	0.0	0.0	chr19	7094419	7094719	(51522897)	C	AluSg	SINE/Alu	(9)	301	1	1811981
3653	9.9	0.0	0.6	chr19	7094818	7095317	(51522299)	+	LOR1a	LTR/ERV1	1	497	(0)	1811982
2351	5.8	0.7	0.0	chr19	7800626	7800934	(50816682)	+	AluY	SINE/Alu	1	311	(0)	1813745
14008	16.0	2.0	6.3	chr19	7800935	7801046	(50816570)	C	HERVKC4-int	LTR/ERVK	(5167)	95	2	1813741
1566	22.1	8.0	2.8	chr19	7801056	7801596	(50816020)	C	LTR14C	LTR/ERVK	(11)	576	5	1813741
2626	16.9	5.3	0.8	chr19	9453904	9454392	(49163224)	+	MER9a3	LTR/ERVK	1	512	(0)	1817462
33559	12.2	1.3	0.8	chr19	9454393	9459482	(49158134)	+	HERVK9-int	LTR/ERVK	1	4889	(1132)	1817462
5939	22.3	9.5	10.3	chr19	11625252	11626526	(46991090)	C	HERVK3-int	LTR/ERVK	(5864)	1338	3	1822816
1574	20.2	4.0	9.9	chr19	11814743	11814993	(46802623)	C	LTR10B1	LTR/ERV1	(0)	547	295	1823182
3239	11.1	6.9	8.0	chr19	12450589	12451187	(46166429)	+	LTR14B	LTR/ERVK	17	608	(0)	1824469
9115	9.8	0.2	0.0	chr19	12451188	12452383	(46165233)	+	HERVK14-int	LTR/ERVK	1	1199	(4897)	1824469
1836	14.3	0.7	2.4	chr19	16184827	16185119	(42432497)	+	AluJo	SINE/Alu	12	299	(13)	1833354
2295	9.5	0.0	0.7	chr19	16538403	16538698	(42078918)	+	AluSc	SINE/Alu	1	294	(15)	1834155
2744	2.0	0.0	0.0	chr19	16539147	16539446	(42078170)	C	AluY	SINE/Alu	(11)	300	1	1834156
2264	10.8	0.0	2.2	chr19	18952904	18953219	(39664397)	+	AluSz	SINE/Alu	1	309	(3)	1839909
266	15.6	5.9	1.5	chr19	19521320	19521384	(39096232)	C	L1MB8	LINE/L1	(755)	5429	5362	1841121
787	16.0	1.6	0.0	chr19	19521385	19521509	(39096107)	C	FLAM_C	SINE/Alu	(8)	135	9	1841123
3061	18.8	5.7	4.5	chr19	19521510	19521590	(39096026)	C	L1MB8	LINE/L1	(756)	5390	5319	1841121
2507	7.7	0.0	0.0	chr19	19521591	19521900	(39095716)	C	AluYj4	SINE/Alu	(0)	311	2	1841124
2238	9.2	0.3	1.9	chr19	19772510	19772824	(38844792)	+	AluSx3	SINE/Alu	1	310	(1)	1841594
3273	20.7	6.7	3.7	chr19	19772825	19772867	(38844749)	+	L1MDa	LINE/L1	3695	3736	(2801)	1841589
1057	20.0	8.6	9.8	chr19	19772868	19773043	(38844573)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	205	1841595
2410	6.8	0.0	0.7	chr19	19773044	19773352	(38844264)	C	AluSg4	SINE/Alu	(2)	308	2	1841596
2773	8.5	2.7	0.0	chr19	19862070	19862459	(38755157)	+	LTR66	LTR/ERVL	1	401	(209)	1841733
2281	10.4	1.3	0.0	chr19	34976186	34976492	(23641124)	+	AluSq2	SINE/Alu	1	311	(2)	1859427
3703	12.0	3.0	3.0	chr19	34976493	34976857	(23640759)	+	LTR26	LTR/ERV1	242	603	(0)	1859426
259	28.9	6.0	10.1	chr19	35130721	35131010	(23486606)	+	L2b	LINE/L2	3106	3378	(9)	1859782
482	32.4	5.3	2.0	chr19	35131119	35131362	(23486254)	C	MIR	SINE/MIR	(10)	252	3	1859783
1406	4.7	0.0	0.0	chr19	35575604	35575773	(23041843)	+	LSU-rRNA_Hsa	rRNA	1911	2080	(2955)	1860678
509	1.7	0.0	0.0	chr19	35575789	35575847	(23041769)	+	LSU-rRNA_Hsa	rRNA	1734	1792	(3243)	1860679
558	10.5	0.0	0.0	chr19	35575848	35575923	(23041693)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	1860680
4594	6.9	0.2	0.0	chr19	35575937	35576532	(23041084)	C	HERVK-int	LTR/ERVK	(4579)	2957	2361	1860677
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
2633	13.6	6.1	3.2	chr19	37335411	37335875	(21281741)	C	LTR3A	LTR/ERVK	(0)	484	6	1864256
4491	9.5	1.0	0.0	chr19	40954173	40954753	(17662863)	+	LTR14C	LTR/ERVK	1	587	(0)	1872319
20069	7.1	1.3	0.1	chr19	40954754	40957267	(17660349)	+	HERVK14C-int	LTR/ERVK	1	2544	(4890)	1872319
540	24.7	12.0	0.0	chr19	44356205	44356358	(14261258)	C	MIR	SINE/MIR	(27)	235	61	1878603
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
272	26.4	8.3	8.7	chr19	51182242	51182482	(7435134)	+	L2a	LINE/L2	3128	3367	(59)	1895133
11661	7.7	0.4	0.7	chr19	51401601	51402323	(7215293)	C	HERVK14-int	LTR/ERVK	(5370)	726	1	1895546
4079	10.6	0.2	4.6	chr19	51402324	51402957	(7214659)	C	LTR14B	LTR/ERVK	(0)	608	3	1895546
6161	14.5	1.9	0.6	chr19	51921151	51922137	(6695479)	+	LTR5B	LTR/ERVK	3	1002	(0)	1896486
594	6.8	0.0	0.0	chr19	51922140	51922212	(6695404)	C	tRNA-Lys-AAG	tRNA	(0)	76	4	1896487
989	24.2	7.8	12.2	chr19	51922213	51922501	(6695115)	+	MLT1G3	LTR/ERVL-MaLR	207	475	(120)	1896485
894	17.9	18.1	10.8	chr19	51931641	51931809	(6685807)	C	L1MB5	LINE/L1	(0)	6174	5954	1896508
2872	14.2	1.2	2.6	chr19	51931810	51932300	(6685316)	C	LTR3A	LTR/ERVK	(0)	484	1	1896509
3191	9.2	5.6	0.2	chr19	51971426	51971880	(6645736)	+	LTR3A	LTR/ERVK	4	484	(0)	1896570
512	26.4	5.5	6.6	chr19	51971881	51971971	(6645645)	+	MLT1F2	LTR/ERVL-MaLR	73	164	(396)	1896569
1171	16.5	0.5	0.5	chr19	51971980	51972180	(6645436)	C	MER31A	LTR/ERV1	(8)	477	277	1896571
961	18.3	5.3	4.3	chr19	52012327	52012495	(6605121)	+	AluJb	SINE/Alu	108	268	(44)	1896638
1841	12.5	1.1	4.6	chr19	52012500	52012657	(6604959)	C	AluSx1	SINE/Alu	(3)	309	156	1896641
3557	8.1	5.0	0.2	chr19	52012658	52013118	(6604498)	C	LTR3A	LTR/ERVK	(0)	484	1	1896642
35219	12.8	1.3	1.2	chr19	52305120	52307502	(6310114)	C	HERVK9-int	LTR/ERVK	(3868)	2153	1	1897211
3823	8.7	0.4	0.0	chr19	52307503	52307999	(6309617)	C	MER9B	LTR/ERVK	(0)	499	1	1897211
2747	11.6	7.8	2.2	chr19	52331491	52331939	(6285677)	+	LTR3A	LTR/ERVK	4	479	(5)	1897252
5559	12.1	3.3	1.2	chr19	52331979	52332825	(6284791)	+	HERVK3-int	LTR/ERVK	1	866	(6336)	1897252
251	35.0	10.1	1.4	chr19	54237629	54238010	(4379606)	C	L1ME3B	LINE/L1	(202)	6040	5610	1901360
2141	11.7	0.3	5.2	chr19	54238011	54238335	(4379281)	C	AluSx3	SINE/Alu	(2)	309	1	1901361
223	33.1	10.8	0.0	chr19	55063369	55063525	(3554091)	+	MIRb	SINE/MIR	36	211	(57)	1902919
603	10.9	0.6	0.8	chr19	55063561	55063743	(3553873)	C	MSR1	Satellite	(0)	182	1	1902920
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
8882	21.5	3.9	4.6	chr19	57463790	57467134	(1150482)	C	L1M1	LINE/L1	(3541)	4021	20	1907852
2369	15.0	6.3	3.7	chr19	57512616	57513045	(1104571)	+	LTR3B_	LTR/ERVK	1	442	(57)	1907925
1927	12.3	10.9	0.3	chr19	57513057	57513374	(1104242)	+	HERVK3-int	LTR/ERVK	28	383	(6819)	1907926
28050	17.2	1.3	0.3	chr19	57513372	57518069	(1099547)	+	HERVK3-int	LTR/ERVK	2456	7199	(3)	1907926
2038	12.2	3.3	0.3	chr19	57709691	57709986	(907630)	C	AluSz6	SINE/Alu	(7)	305	1	1908195
1079	20.2	6.1	9.5	chr19	57830622	57830742	(786874)	C	LTR62	LTR/ERVL	(393)	316	183	1908401
411	25.2	1.2	2.5	chr2	52519	52681	(242140848)	+	Charlie1a	DNA/hAT-Charlie	1295	1455	(0)	1910856
202	22.0	2.0	0.0	chr2	52762	52811	(242140718)	C	L2c	LINE/L2	(0)	3387	3337	1910857
897	30.8	5.3	1.9	chr2	52836	53452	(242140077)	+	L1M5	LINE/L1	3954	4592	(1554)	1910858
5458	7.5	5.4	15.0	chr2	8894647	8895631	(233297898)	C	LTR12D	LTR/ERV1	(0)	1254	370	1922013
494	29.4	6.7	0.6	chr2	10917795	10917962	(231275567)	C	MIRc	SINE/MIR	(45)	223	45	1925729
2503	7.3	0.0	0.3	chr2	15237772	15238074	(226955455)	C	AluSx3	SINE/Alu	(9)	302	1	1932412
17	8.3	3.9	0.0	chr2	16168821	16168846	(226024683)	+	(GA)n	Simple_repeat	1	27	(0)	1934071
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2297	19.6	8.1	0.2	chr2	33884115	33884534	(208308995)	+	LTR32	LTR/ERVL	1	456	(1)	1962699
1782	10.4	8.8	0.0	chr2	38335760	38336053	(203857476)	+	AluY	SINE/Alu	1	311	(0)	1969021
3657	6.5	6.5	0.0	chr2	48384541	48385019	(193808510)	+	MER9a3	LTR/ERVK	1	512	(0)	1985870
4383	5.1	2.9	3.6	chr2	48385020	48385604	(193807925)	+	HERVK9-int	LTR/ERVK	1	581	(5440)	1985870
459	25.0	17.9	0.5	chr2	54615483	54615667	(187577862)	C	MIR	SINE/MIR	(2)	260	37	1994632
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
10448	13.4	3.8	4.4	chr2	58168159	58171615	(184021914)	+	L1P2	LINE/L1	14	3414	(2917)	1999434
2460	8.9	0.3	0.0	chr2	58591919	58592221	(183601308)	C	AluSp	SINE/Alu	(9)	304	1	2000007
189	30.9	11.9	1.2	chr2	58592269	58592350	(183601179)	C	MamGypsy2-LTR	LTR/Gypsy	(2)	181	90	2000006
328	33.6	8.8	9.1	chr2	63059510	63059784	(179133745)	C	L1M4b	LINE/L1	(6375)	492	219	2007382
29	3.2	0.0	0.0	chr2	63059974	63060005	(179133524)	+	(CCACCC)n	Simple_repeat	1	32	(0)	2007383
1182	24.2	9.1	2.1	chr2	64461593	64461972	(177731557)	C	L1ME1	LINE/L1	(19)	6160	5752	2009398
1375	20.4	5.3	9.0	chr2	75466496	75466850	(166726679)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	2027004
358	28.0	0.0	1.1	chr2	75466975	75467068	(166726461)	C	MER5A	DNA/hAT-Charlie	(2)	187	95	2027005
4239	24.8	2.9	1.2	chr2	77610787	77611649	(164581880)	+	L1PREC2	LINE/L1	2171	3059	(5096)	2029890
21638	12.5	1.6	1.2	chr2	77611664	77617734	(164575795)	+	L1PA10	LINE/L1	10	6103	(380)	2029892
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2753	8.2	5.1	1.8	chr2	90287799	90293618	(151899911)	+	(CCAAGCCAG)n	Simple_repeat	1	6115	(0)	2048155
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
632	23.7	12.4	3.7	chr2	96780100	96780285	(145413244)	C	L1M5	LINE/L1	(1584)	4562	4345	2052771
798	29.4	8.2	7.6	chr2	96780304	96780427	(145413102)	C	MER21C	LTR/ERVL	(97)	841	707	2052775
960	12.1	0.8	0.0	chr2	96780428	96780559	(145412970)	C	FLAM_C	SINE/Alu	(10)	133	1	2052776
798	29.4	8.2	7.6	chr2	96780560	96780714	(145412815)	C	MER21C	LTR/ERVL	(232)	706	558	2052775
960	16.5	0.6	2.5	chr2	96780715	96780726	(145412803)	C	AluJo	SINE/Alu	(19)	293	283	2052777
4471	13.1	1.4	1.7	chr2	98039085	98039797	(144153732)	+	MER50	LTR/ERV1	1	711	(23)	2054459
1794	21.1	4.8	3.1	chr2	98040385	98040838	(144152691)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	2054460
922	19.5	0.0	0.0	chr2	98429345	98429508	(143764021)	C	AluJr	SINE/Alu	(12)	300	137	2055008
468	18.8	1.5	6.6	chr2	98429509	98429594	(143763935)	C	L1M4	LINE/L1	(3107)	3537	3456	2055004
1794	14.8	24.1	3.2	chr2	98429595	98429964	(143763565)	+	MER61B	LTR/ERV1	1	502	(113)	2055009
532	16.8	4.5	6.1	chr2	98429965	98430078	(143763451)	+	MER61-int	LTR/ERV1	22	133	(5084)	2055009
25542	11.9	1.3	5.5	chr2	98430143	98431092	(143762437)	+	MER61-int	LTR/ERV1	364	1512	(3705)	2055009
545	34.0	6.5	2.3	chr2	100068483	100068834	(142124695)	+	L3	LINE/CR1	3729	4096	(3)	2057352
7089	6.8	2.6	0.0	chr2	101237832	101238705	(140954824)	+	MER11D	LTR/ERVK	1	897	(0)	2059252
7021	5.7	0.5	0.0	chr2	101238714	101239563	(140953966)	+	HERVK11D-int	LTR/ERVK	9	862	(6890)	2059253
459	31.5	10.5	3.5	chr2	104260622	104261007	(137932522)	+	L1MA9	LINE/L1	1535	1778	(5718)	2063284
61	5.6	3.1	2.0	chr2	104857037	104857132	(137336397)	+	(GCC)n	Simple_repeat	1	99	(0)	2064076
3621	9.3	4.4	0.4	chr2	112044492	112044989	(130148540)	C	LTR17	LTR/ERV1	(6)	774	256	2074462
5185	19.7	5.1	9.4	chr2	112044994	112045021	(130148508)	C	L1MEc	LINE/L1	(4811)	1589	1568	2074460
2107	15.1	0.0	0.0	chr2	112045022	112045319	(130148210)	C	AluSz6	SINE/Alu	(14)	298	1	2074464
10258	9.1	5.2	0.9	chr2	120258809	120260317	(121933212)	C	LTR12C	LTR/ERV1	(1)	1578	2	2086668
1044	32.9	14.1	6.4	chr2	120260318	120260953	(121932576)	C	L2	LINE/L2	(891)	2528	1909	2086667
1860	21.7	4.2	2.4	chr2	128036818	128037258	(114156271)	+	LTR10B1	LTR/ERV1	2	547	(0)	2098536
9215	26.3	5.3	6.9	chr2	128037259	128040545	(114152984)	+	HERVI-int	LTR/ERV1	1	3232	(4553)	2098536
944	11.5	5.7	1.3	chr2	130252637	130252786	(111940743)	C	MER4A1	LTR/ERV1	(315)	157	1	2101569
9360	13.8	9.2	2.5	chr2	132278678	132281663	(109911866)	C	LSU-rRNA_Hsa	rRNA	(67)	4968	1736	2104348
42078	6.3	0.8	0.7	chr2	134805284	134810960	(107382569)	C	HERV9NC-int	LTR/ERV1	(894)	5224	1	2107959
5412	6.5	3.3	0.0	chr2	134810985	134811649	(107381880)	C	LTR12_	LTR/ERV1	(0)	688	1	2107959
16	0.0	0.0	0.0	chr2	144491358	144491374	(97702155)	+	(A)n	Simple_repeat	1	17	(0)	2121474
228	34.2	2.4	5.5	chr2	147122552	147122678	(95070851)	C	L2c	LINE/L2	(36)	3351	3229	2124826
9000	15.2	2.4	2.8	chr2	148236259	148237807	(93955722)	C	Tigger1	DNA/TcMar-Tigger	(875)	1543	2	2126346
1882	11.8	9.6	3.8	chr2	149823260	149823601	(92369928)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2128595
323	33.1	10.7	0.8	chr2	152465984	152466117	(89727412)	+	MIRc	SINE/MIR	2	150	(118)	2132480
14	11.7	0.0	3.3	chr2	152466362	152466391	(89727138)	+	(TTTC)n	Simple_repeat	1	30	(0)	2132481
972	23.9	6.6	7.9	chr2	153959948	153960301	(88233228)	C	MER66-int	LTR/ERV1	(6277)	399	51	2134337
1796	19.8	6.4	4.4	chr2	153960311	153960786	(88232743)	C	MER66B	LTR/ERV1	(0)	486	1	2134337
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
1122	16.2	0.0	9.5	chr2	161306954	161307175	(80886354)	+	AluJb	SINE/Alu	87	287	(25)	2144255
19	3.0	5.6	2.6	chr2	161307182	161307217	(80886312)	+	(AATAA)n	Simple_repeat	1	38	(0)	2144256
16249	7.4	0.7	0.3	chr2	166740771	166743626	(75449903)	C	HERV9N-int	LTR/ERV1	(2421)	2953	1	2151355
5622	8.9	1.6	7.3	chr2	166743651	166744527	(75449002)	C	LTR12	LTR/ERV1	(0)	826	1	2151355
227	32.0	12.1	5.3	chr2	175729394	175729716	(66463813)	+	L2b	LINE/L2	3021	3368	(7)	2165139
12	10.1	9.4	0.0	chr2	177619894	177619925	(64573604)	+	(ATTAA)n	Simple_repeat	1	35	(0)	2167866
5067	13.1	4.5	0.8	chr2	179298472	179299375	(62894154)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(68)	1000	130	2169974
14546	14.2	3.6	2.0	chr2	179611954	179614303	(62579226)	C	L1MA3	LINE/L1	(5158)	2407	17	2170403
1825	14.7	6.2	0.9	chr2	180336418	180336740	(61856789)	+	MER61A	LTR/ERV1	1	341	(0)	2171349
2467	19.8	17.4	3.7	chr2	180336741	180337389	(61856140)	+	MER61-int	LTR/ERV1	1	738	(4479)	2171349
13	16.8	0.0	5.4	chr2	180981202	180981238	(61212291)	+	(GCC)n	Simple_repeat	1	37	(0)	2172151
15	28.4	0.0	1.9	chr2	180981264	180981316	(61212213)	+	(TTTG)n	Simple_repeat	1	53	(0)	2172152
580	24.6	17.2	3.4	chr2	185012334	185012500	(57181029)	+	L1MC5	LINE/L1	9036	9231	(73)	2177237
1531	17.8	5.9	2.7	chr2	185012511	185012840	(57180689)	+	MER61A	LTR/ERV1	1	341	(0)	2177239
2907	20.0	6.6	1.8	chr2	185012841	185013512	(57180017)	+	MER61-int	LTR/ERV1	1	707	(4510)	2177239
265	28.9	14.8	6.9	chr2	189674909	189675036	(52518493)	+	MIRb	SINE/MIR	33	178	(90)	2183194
780	21.9	3.3	0.0	chr2	189675037	189675214	(52518315)	+	MER5A	DNA/hAT-Charlie	5	188	(1)	2183195
1053	26.9	6.7	5.9	chr2	191354948	191355389	(50838140)	+	MLT1H2	LTR/ERVL-MaLR	44	489	(0)	2185733
682	29.1	11.3	3.2	chr2	191355412	191355823	(50837706)	C	LTR79	LTR/ERVL	(37)	490	41	2185734
315	25.4	6.3	8.5	chr2	199955997	199956125	(42237404)	+	L1MDb	LINE/L1	649	774	(5635)	2197597
254	35.6	6.0	1.1	chr2	206921104	206921293	(35272236)	C	L2	LINE/L2	(1903)	1516	1317	2209309
346	32.6	3.8	13.0	chr2	206921297	206921557	(35271972)	+	L2c	LINE/L2	3147	3382	(5)	2209310
3588	6.4	2.1	0.4	chr2	210426524	210426980	(31766549)	C	HERVK11-int	LTR/ERVK	(1184)	6769	6305	2214348
266	2.5	7.0	2.4	chr2	210426979	210427019	(31766510)	C	HERVK11-int	LTR/ERVK	(7910)	43	1	2214349
7041	10.4	12.5	0.2	chr2	210427020	210428103	(31765426)	C	MER11B	LTR/ERVK	(0)	1236	1	2214349
12	26.1	0.0	4.1	chr2	216892579	216892627	(25300902)	+	(ATTT)n	Simple_repeat	1	49	(0)	2223606
356	34.4	12.1	4.5	chr2	216892845	216893475	(25300054)	+	L2b	LINE/L2	2360	3055	(364)	2223607
1665	18.7	2.2	1.6	chr2	224548722	224549031	(17644498)	+	AluJb	SINE/Alu	1	312	(0)	2236106
2041	12.9	1.0	1.9	chr2	224549034	224549344	(17644185)	+	AluSz6	SINE/Alu	2	309	(3)	2236107
2091	8.8	2.7	1.7	chr2	231373617	231373911	(10819618)	+	AluSz6	SINE/Alu	1	298	(14)	2246762
20	31.9	0.6	1.7	chr2	231374541	231374631	(10818898)	+	A-rich	Low_complexity	1	89	(0)	2246763
239	17.8	12.1	1.4	chr2	239759739	239759812	(2433717)	+	Arthur1	DNA/hAT-Tip100	2328	2410	(1537)	2259294
1255	23.5	6.7	2.1	chr2	239759819	239760244	(2433285)	+	Arthur1	DNA/hAT-Tip100	3375	3821	(126)	2259295
342	30.2	14.3	4.3	chr2	240821449	240821704	(1371825)	C	L1M5	LINE/L1	(2515)	3631	3346	2260411
14	24.4	0.0	2.2	chr20	2652173	2652218	(61791949)	+	G-rich	Low_complexity	1	46	(0)	2267366
32	7.4	0.0	0.0	chr20	2652733	2652775	(61791392)	+	(GGGCCT)n	Simple_repeat	1	43	(0)	2267367
293	12.5	4.0	0.0	chr20	5688129	5688176	(58755991)	+	MLT1K	LTR/ERVL-MaLR	546	595	(0)	2273051
822	26.5	4.3	7.5	chr20	5688471	5688858	(58755309)	+	LTR16C	LTR/ERVL	99	473	(16)	2273052
1980	18.0	5.7	5.0	chr20	16635220	16635446	(47808721)	+	MLT1C	LTR/ERVL-MaLR	8	245	(222)	2289676
4352	5.5	0.0	0.0	chr20	23466925	23467437	(40976730)	+	MER9a1	LTR/ERVK	1	513	(0)	2299760
46214	5.8	0.7	0.4	chr20	23467438	23468142	(40976025)	+	HERVK9-int	LTR/ERVK	1	727	(5294)	2299760
679	29.3	16.8	1.5	chr20	24979523	24980204	(39463963)	+	L2a	LINE/L2	2587	3421	(5)	2301549
336	28.8	10.9	1.2	chr20	24980279	24980443	(39463724)	+	L3	LINE/CR1	2263	2445	(1654)	2301550
28296	12.4	1.6	1.3	chr20	25401241	25402113	(39042054)	C	HERVK3-int	LTR/ERVK	(5986)	1216	358	2302106
28296	12.4	1.6	1.3	chr20	25402413	25402759	(39041408)	C	HERVK3-int	LTR/ERVK	(6845)	357	15	2302106
3143	11.4	0.6	3.6	chr20	25402773	25403271	(39040896)	C	LTR3A	LTR/ERVK	(0)	484	1	2302111
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
879	14.3	0.5	9.3	chr20	33708001	33708182	(30735985)	C	L1MC	LINE/L1	(2827)	3319	3138	2311394
2015	11.2	1.0	2.4	chr20	33708183	33708478	(30735689)	C	AluSx	SINE/Alu	(12)	300	9	2311395
879	14.3	0.5	9.3	chr20	33708479	33708541	(30735626)	C	L1MC	LINE/L1	(3009)	3137	3096	2311394
603	14.8	4.7	0.0	chr20	33708560	33708660	(30735507)	C	AluJr	SINE/Alu	(194)	118	13	2311396
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
14	12.5	0.0	0.0	chr20	35558945	35558970	(28885197)	+	(AGC)n	Simple_repeat	1	26	(0)	2315551
18	3.8	0.0	3.5	chr20	40275784	40275812	(24168355)	+	(AAAG)n	Simple_repeat	1	29	(0)	2325482
940	12.9	0.0	0.0	chr20	44832403	44832526	(19611641)	C	FLAM_A	SINE/Alu	(18)	124	1	2334457
516	32.1	8.4	5.0	chr20	46191001	46191321	(18252846)	C	L2b	LINE/L2	(20)	3355	3023	2337136
481	30.2	9.9	0.0	chr20	46191571	46191742	(18252425)	C	MIR	SINE/MIR	(70)	192	2	2337137
876	25.2	9.0	2.2	chr20	47196108	47196427	(17247740)	C	L1ME3	LINE/L1	(0)	6162	5819	2339457
2118	14.3	0.0	0.0	chr20	47314217	47314523	(17129644)	+	AluSz	SINE/Alu	1	307	(5)	2339730
658	16.1	4.1	0.0	chr20	47314524	47314641	(17129526)	+	MER5A	DNA/hAT-Charlie	66	188	(1)	2339731
2193	10.9	2.0	0.0	chr20	47379283	47379576	(17064591)	C	AluSz	SINE/Alu	(9)	303	4	2339874
1608	27.5	9.8	7.3	chr20	47379577	47379591	(17064576)	C	L2a	LINE/L2	(864)	2555	2551	2339870
1416	15.8	1.3	1.8	chr20	47379592	47379819	(17064348)	C	AluJo	SINE/Alu	(53)	259	33	2339875
1608	27.5	9.8	7.3	chr20	47379820	47380172	(17063995)	C	L2a	LINE/L2	(869)	2550	2181	2339870
433	26.5	11.2	1.8	chr20	47905510	47905678	(16538489)	C	MIRb	SINE/MIR	(29)	239	53	2341084
251	20.9	8.7	14.2	chr20	52291588	52291721	(12152446)	C	LTR88b	LTR/Gypsy?	(33)	804	679	2351194
1232	15.9	4.1	1.7	chr20	52291716	52291951	(12152216)	+	MER96B	DNA/hAT-Tip100	12	253	(164)	2351195
27	8.3	0.0	2.4	chr20	52291963	52292003	(12152164)	+	(AT)n	Simple_repeat	1	41	(0)	2351196
183	26.7	0.0	4.8	chr20	53832441	53832503	(10611664)	C	L2a	LINE/L2	(12)	3414	3355	2354460
623	24.3	2.8	3.8	chr20	53832582	53832736	(10611431)	+	MIR	SINE/MIR	8	159	(103)	2354461
2181	11.4	8.3	0.3	chr20	53832737	53833070	(10611097)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	2354462
28	9.6	0.0	0.0	chr20	62143440	62143484	(2300683)	+	(GGCGGCGTCA)n	Simple_repeat	1	45	(0)	2368191
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
3385	21.4	4.8	8.7	chr21	9310014	9310434	(37399549)	+	LTR49-int	LTR/ERV1	4283	4540	(1791)	2374409
1689	19.9	0.3	1.0	chr21	9310435	9310726	(37399257)	+	AluJb	SINE/Alu	2	291	(21)	2374414
4238	21.9	5.2	2.3	chr21	9341202	9342463	(37367520)	C	MER52A	LTR/ERV1	(0)	1755	1	2374438
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1951	29.8	4.7	5.4	chr21	9816509	9817787	(36892196)	C	SST1	Satellite/centr	(11)	1552	284	2374893
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
2875	25.9	2.3	2.8	chr21	10338090	10338991	(36370992)	+	L1MA6	LINE/L1	5394	6291	(9)	2375377
7048	17.6	1.9	1.9	chr21	15521226	15522466	(31187517)	C	MER52A	LTR/ERV1	(0)	1755	515	2379231
2362	9.1	1.3	0.3	chr21	26108605	26108912	(20601071)	+	AluSq	SINE/Alu	1	311	(2)	2393521
235	30.1	5.7	2.4	chr21	26108933	26109017	(20600966)	+	L2	LINE/L2	2848	2935	(484)	2393522
2370	12.9	7.7	1.2	chr21	26109217	26109616	(20600367)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2393523
2850	18.1	9.2	3.5	chr21	34166003	34166667	(12543316)	C	MER61-int	LTR/ERV1	(4510)	707	1	2406208
1679	15.4	8.8	2.2	chr21	34166668	34166985	(12542998)	C	MER61A	LTR/ERV1	(0)	341	1	2406208
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
1349	20.7	0.4	5.9	chr22	10708283	10708552	(40109916)	C	AluJr	SINE/Alu	(56)	256	2	2424540
2131	14.2	0.0	0.7	chr22	10750438	10750747	(40067721)	+	AluSx3	SINE/Alu	1	308	(3)	2424591
310	29.1	17.0	3.4	chr22	10750748	10751167	(40067301)	+	L4_A_Mam	LINE/RTE-X	4482	4977	(13)	2424589
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
24888	7.0	0.5	0.1	chr22	12031367	12037491	(38780977)	C	L1PA4	LINE/L1	(3)	6325	176	2425613
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
7489	15.0	3.0	5.1	chr22	17070324	17071176	(33747292)	C	L1M3f	LINE/L1	(1698)	5864	4995	2428166
2220	13.2	0.0	0.0	chr22	17071177	17071479	(33746989)	C	AluSx1	SINE/Alu	(8)	304	2	2428167
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
1759	12.3	0.4	5.8	chr22	18730463	18730754	(32087714)	+	AluSc8	SINE/Alu	13	288	(23)	2430924
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
4625	8.2	2.7	2.0	chr22	19934860	19935775	(30882693)	+	MER11A	LTR/ERVK	109	1266	(0)	2432709
21899	6.9	0.8	1.5	chr22	19935776	19938863	(30879605)	+	HERVK11-int	LTR/ERVK	1	3067	(4886)	2432709
31	6.0	0.0	6.7	chr22	30968842	30968901	(19849567)	+	(GCC)n	Simple_repeat	1	60	(0)	2453682
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
20137	17.4	2.3	4.0	chr22	39057553	39062558	(11755910)	C	HERVH-int	LTR/ERV1	(1697)	6016	1	2470799
2283	10.8	1.3	0.0	chr22	40701127	40701433	(10117035)	C	AluSx	SINE/Alu	(0)	312	2	2474140
2814	14.6	1.6	4.0	chr22	40701434	40701765	(10116703)	+	MER34D	LTR/ERV1	253	579	(0)	2474137
483	20.5	12.2	10.3	chr22	40701771	40701955	(10116513)	+	MLT1A	LTR/ERVL-MaLR	45	233	(141)	2474136
444	28.7	7.4	0.0	chr22	43541378	43541527	(7276941)	C	L1MC4a	LINE/L1	(0)	7882	7721	2480413
228	26.2	7.7	1.2	chr22	43541572	43541656	(7276812)	+	L3	LINE/CR1	1814	1904	(2195)	2480414
298	28.9	6.9	0.8	chr22	43541806	43541927	(7276541)	+	L2b	LINE/L2	3245	3374	(1)	2480407
13	21.7	0.0	2.6	chr22	47015661	47015699	(3802769)	+	(CAGGAGC)n	Simple_repeat	1	39	(0)	2486342
2481	9.0	0.0	0.0	chr22	47096540	47096851	(3721617)	+	AluSz6	SINE/Alu	1	312	(0)	2486428
579	29.4	6.3	10.3	chr22	47096911	47097333	(3721135)	C	L1M5	LINE/L1	(1164)	4982	4579	2486427
270	25.1	15.8	5.1	chr22	48761030	48761243	(2057225)	+	MLT1H	LTR/ERVL-MaLR	238	478	(71)	2488568
292	22.0	24.2	2.8	chr3	8726035	8726179	(189569380)	C	MIRb	SINE/MIR	(81)	187	2	2505836
991	17.8	17.6	0.0	chr3	8726586	8726815	(189568744)	+	MLT1D	LTR/ERVL-MaLR	227	505	(0)	2505837
887	21.4	6.0	2.6	chr3	24716887	24717112	(173578447)	C	MER96B	DNA/hAT-Tip100	(183)	234	1	2532282
382	28.4	4.7	6.6	chr3	24717163	24717358	(173578201)	C	LTR16A2	LTR/ERVL	(303)	192	1	2532283
828	21.2	3.3	1.9	chr3	27799619	27799829	(170495730)	C	MER20	DNA/hAT-Charlie	(5)	214	1	2536800
339	35.5	10.8	6.9	chr3	30857148	30857582	(167437977)	C	L2c	LINE/L2	(8)	3379	2926	2541154
1260	28.4	8.0	2.9	chr3	30857587	30858230	(167437329)	+	L2a	LINE/L2	2741	3426	(0)	2541155
1854	14.4	6.5	1.9	chr3	31042678	31043002	(167252557)	+	MER61A	LTR/ERV1	1	341	(0)	2541468
236	34.6	12.9	7.3	chr3	31043003	31043041	(167252518)	+	L2b	LINE/L2	3314	3346	(29)	2541466
2232	17.5	2.3	2.1	chr3	31043062	31043546	(167252013)	+	MER61-int	LTR/ERV1	64	549	(4668)	2541469
405	30.0	2.4	1.2	chr3	31810979	31811140	(166484419)	C	MER76	LTR/ERVL	(27)	664	501	2542669
496	27.0	7.8	2.5	chr3	31811175	31811498	(166484061)	C	MER76	LTR/ERVL	(290)	401	11	2542669
653	25.0	0.6	0.6	chr3	33113569	33113725	(165181834)	+	MER5A	DNA/hAT-Charlie	1	157	(32)	2545323
24	19.1	3.2	1.5	chr3	33114003	33114065	(165181494)	+	(CCTT)n	Simple_repeat	1	65	(0)	2545324
31	14.1	0.0	0.0	chr3	36763992	36764040	(161531519)	+	(AC)n	Simple_repeat	1	49	(0)	2550362
21	22.0	0.0	5.6	chr3	36764214	36764284	(161531275)	+	G-rich	Low_complexity	1	71	(0)	2550363
25	21.1	0.0	1.6	chr3	36764397	36764459	(161531100)	+	(CCGCCCG)n	Simple_repeat	1	61	(0)	2550364
3102	26.0	7.7	1.6	chr3	42935374	42936173	(155359386)	+	FordPrefect	DNA/hAT-Tip100	388	1240	(443)	2559909
2181	12.9	0.0	0.0	chr3	45332237	45332539	(152963020)	C	AluSz	SINE/Alu	(9)	303	1	2563657
579	28.5	2.0	7.6	chr3	45332540	45332702	(152962857)	C	MIR	SINE/MIR	(102)	160	6	2563656
186	21.9	0.0	0.0	chr3	45332825	45332865	(152962694)	C	L2c	LINE/L2	(20)	3367	3327	2563658
1036	31.8	3.5	5.8	chr3	46443890	46444407	(151851152)	+	MLT1J	LTR/ERVL-MaLR	1	506	(6)	2565391
24459	6.7	0.8	0.5	chr3	49225481	49228515	(149067044)	C	HERV9N-int	LTR/ERV1	(2209)	3165	31	2570861
5085	8.7	13.2	0.1	chr3	49228539	49229256	(149066303)	C	LTR12	LTR/ERV1	(0)	826	1	2570861
291	21.1	14.8	4.6	chr3	51538360	51538468	(146757091)	C	MIRb	SINE/MIR	(45)	223	102	2574562
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
6368	8.0	1.3	0.2	chr3	51849803	51850619	(146444940)	+	LTR12	LTR/ERV1	1	826	(0)	2575062
34151	6.4	0.7	0.8	chr3	51850620	51855457	(146440102)	+	HERV9N-int	LTR/ERV1	1	4741	(633)	2575062
1637	15.8	7.0	2.2	chr3	60775299	60775622	(137519937)	+	MER61A	LTR/ERV1	1	341	(0)	2589496
1558	17.8	28.2	4.3	chr3	60775623	60776187	(137519372)	+	MER61-int	LTR/ERV1	1	700	(4517)	2589496
252	29.0	4.1	2.1	chr3	73351055	73351149	(124944410)	C	MER5A	DNA/hAT-Charlie	(5)	184	77	2611074
259	34.1	1.7	4.5	chr3	75550948	75551125	(122744434)	+	L2c	LINE/L2	3070	3242	(145)	2614412
241	28.3	8.3	0.0	chr3	75551147	75551245	(122744314)	+	HAL1b	LINE/L1	1548	1655	(766)	2614413
580	4.3	0.0	0.0	chr3	75551314	75551382	(122744177)	+	LTR5A	LTR/ERVK	965	1033	(0)	2614414
37160	14.8	0.6	1.1	chr3	75551383	75558968	(122736591)	+	HERVK-int	LTR/ERVK	1	7536	(0)	2614414
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
2111	15.9	0.3	0.9	chr3	78246303	78246645	(120048914)	+	MER61A	LTR/ERV1	1	341	(0)	2617889
2550	18.9	3.9	3.9	chr3	78246647	78247212	(120048347)	+	MER61-int	LTR/ERV1	2	567	(4650)	2617889
12115	12.4	1.0	0.3	chr3	80430657	80432539	(117863020)	+	L1PREC2	LINE/L1	3183	5078	(1068)	2620734
1854	14.6	5.3	0.9	chr3	87141103	87141428	(111154131)	+	MER61A	LTR/ERV1	1	341	(0)	2629167
1976	18.2	7.6	2.3	chr3	87141429	87141900	(111153659)	+	MER61-int	LTR/ERV1	1	499	(4718)	2629167
2080	11.5	0.0	1.1	chr3	93841450	93841766	(104453793)	C	AluSg	SINE/Alu	(0)	310	1	2633421
4456	13.5	2.9	2.8	chr3	100197011	100197736	(98097823)	C	MER50	LTR/ERV1	(7)	727	1	2641320
6691	19.8	11.9	0.5	chr3	100197741	100198183	(98097376)	+	L1M2	LINE/L1	145	751	(6098)	2641319
382	19.5	0.0	9.9	chr3	100682147	100682288	(97613271)	+	MER52D	LTR/ERV1	361	488	(1635)	2642070
1059	19.7	0.5	0.5	chr3	100682701	100682914	(97612645)	+	MER52D	LTR/ERV1	470	683	(1440)	2642070
4500	16.0	9.9	1.1	chr3	103409725	103410611	(94884948)	+	LTR28B	LTR/ERV1	2	974	(0)	2645760
527	30.3	14.6	2.9	chr3	103410612	103411480	(94884079)	+	L1ME3Cz	LINE/L1	5092	5400	(746)	2645758
1290	29.0	8.6	3.7	chr3	106496323	106496944	(91798615)	C	MLT2F	LTR/ERVL	(8)	655	1	2649606
305	23.2	2.0	14.7	chr3	116266907	116267022	(82028537)	C	MIR	SINE/MIR	(2)	260	160	2663288
341	21.5	14.7	0.0	chr3	122939053	122939145	(75356414)	+	MER81	DNA/hAT-Blackjack	6	114	(0)	2672837
535	24.8	10.9	2.0	chr3	122939600	122939794	(75355765)	C	MIRb	SINE/MIR	(53)	215	1	2672838
6706	2.3	1.0	0.0	chr3	125890459	125891239	(72404320)	+	LTR5_Hs	LTR/ERVK	1	789	(179)	2677847
317	13.0	0.0	0.0	chr3	125891209	125891262	(72404297)	+	LTR5_Hs	LTR/ERVK	915	968	(0)	2677847
63114	2.4	0.1	0.0	chr3	125891263	125898703	(72396856)	+	HERVK-int	LTR/ERVK	1	7447	(89)	2677847
648	24.5	1.4	0.0	chr3	126682422	126682564	(71612995)	+	MIRb	SINE/MIR	11	155	(113)	2678927
3699	14.5	2.1	1.5	chr3	126682631	126683244	(71612315)	C	LTR31	LTR/ERV1	(0)	619	2	2678928
309	24.7	13.1	1.1	chr3	126713667	126713760	(71581799)	+	L2b	LINE/L2	3264	3370	(5)	2678985
46	2.2	2.1	0.0	chr3	127351749	127351795	(70943764)	+	(AC)n	Simple_repeat	1	48	(0)	2679892
2106	8.3	0.0	7.7	chr3	134676954	134677266	(63618293)	+	AluSx3	SINE/Alu	1	289	(22)	2691774
823	30.4	13.7	1.2	chr3	134876360	134876846	(63418713)	C	MLT1K	LTR/ERVL-MaLR	(22)	573	17	2692096
1154	19.8	10.1	0.8	chr3	138205910	138206261	(60089298)	C	Charlie5	DNA/hAT-Charlie	(1)	2623	2236	2697168
375	15.0	13.7	2.7	chr3	138206264	138206373	(60089186)	C	Charlie5	DNA/hAT-Charlie	(2500)	124	1	2697169
929	28.8	4.6	2.7	chr3	138206383	138206682	(60088877)	+	L2a	LINE/L2	2917	3222	(204)	2697163
435	27.2	13.0	0.0	chr3	138876338	138876484	(59419075)	C	MIRb	SINE/MIR	(13)	255	87	2698398
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
305	30.8	4.5	12.0	chr3	143436813	143437196	(54858363)	+	L2c	LINE/L2	3034	3387	(0)	2705673
6008	5.4	0.1	0.0	chr3	148562362	148563554	(49732005)	+	L1PA6	LINE/L1	1528	2705	(3441)	2712271
35394	0.6	0.0	0.0	chr3	148563690	148567609	(49727950)	C	HERVK-int	LTR/ERVK	(3617)	3919	1	2712272
16	0.0	0.0	0.0	chr3	148837481	148837497	(49458062)	+	(A)n	Simple_repeat	1	17	(0)	2712624
5397	21.4	7.4	2.5	chr3	149935119	149937580	(48357979)	C	L1M1	LINE/L1	(3733)	3829	1251	2714459
10947	9.5	1.0	0.5	chr3	157562763	157563835	(40731724)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	497	2725668
15	17.9	0.0	0.0	chr3	160226116	160226147	(38069412)	+	(GGC)n	Simple_repeat	1	32	(0)	2729486
525	23.2	0.8	0.0	chr3	171943217	171943341	(26352218)	C	MER5A1	DNA/hAT-Charlie	(37)	129	4	2745324
869	11.6	0.0	0.0	chr3	171943390	171943510	(26352049)	C	AluSq2	SINE/Alu	(6)	307	187	2745325
2213	11.1	0.3	3.7	chr3	171943536	171943859	(26351700)	C	AluSp	SINE/Alu	(0)	313	1	2745326
11326	9.3	0.2	0.7	chr3	172432368	172433954	(25861605)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2746063
206	34.5	7.3	2.1	chr3	177116220	177116361	(21179198)	+	L2c	LINE/L2	2432	2581	(838)	2752606
373	25.8	9.1	6.6	chr3	177458041	177458073	(20837486)	+	L1MEc	LINE/L1	2143	2176	(576)	2753298
2990	13.2	2.2	1.3	chr3	177458074	177458525	(20837034)	+	MSTB2	LTR/ERVL-MaLR	1	456	(1)	2753299
2123	13.0	5.3	2.4	chr3	180894470	180894800	(17400759)	+	MER61A	LTR/ERV1	1	341	(0)	2758498
2676	16.0	8.8	3.1	chr3	180894802	180895458	(17400101)	+	MER61-int	LTR/ERV1	1	787	(4430)	2758498
50470	0.9	0.1	0.1	chr3	185565226	185570759	(12724800)	C	HERVK-int	LTR/ERVK	(2002)	5534	1	2766655
8884	1.4	0.0	0.0	chr3	185570760	185571727	(12723832)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2766655
2746	5.6	0.3	0.3	chr3	185938494	185938799	(12356760)	+	AluY	SINE/Alu	1	306	(5)	2767402
439	34.4	2.8	8.4	chr3	188850467	188850774	(9444785)	+	L3	LINE/CR1	3266	3555	(544)	2772610
228	23.7	0.0	0.0	chr3	188850777	188850835	(9444724)	+	CR1-3_Croc	LINE/CR1	2571	2629	(976)	2772611
665	29.8	12.8	4.0	chr3	188850843	188851247	(9444312)	+	L3	LINE/CR1	3653	4098	(1)	2772610
419	29.0	0.0	16.0	chr3	190515116	190515348	(7780211)	+	MIRb	SINE/MIR	32	231	(37)	2775224
564	22.1	0.8	0.8	chr3	197494797	197494924	(800635)	+	MLT1N2	LTR/ERVL-MaLR	432	559	(3)	2787013
274	25.6	10.9	2.4	chr4	1468914	1468997	(188745558)	C	MIR	SINE/MIR	(16)	246	155	2790227
613	31.3	2.4	0.0	chr4	8387160	8387360	(181827195)	C	MIR	SINE/MIR	(19)	243	38	2801685
8450	5.7	1.4	0.0	chr4	9657956	9658973	(180555582)	+	LTR5A	LTR/ERVK	1	1033	(0)	2803383
46859	15.6	0.6	0.8	chr4	9658974	9666434	(180548121)	+	HERVK-int	LTR/ERVK	1	7448	(88)	2803383
930	22.5	1.4	5.9	chr4	25006659	25006880	(165207675)	C	MIR	SINE/MIR	(30)	232	21	2828117
816	30.7	8.4	3.1	chr4	25006886	25007402	(165207153)	C	L1ME4a	LINE/L1	(56)	6068	5522	2828118
7417	13.4	4.0	0.0	chr4	37304359	37305504	(152909051)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	438	2845944
2471	12.4	2.2	0.8	chr4	38713862	38714220	(151500335)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2848266
2179	11.7	0.3	8.3	chr4	43468818	43469191	(146745364)	+	LTR14A	LTR/ERVK	1	344	(0)	2857020
4840	8.2	0.1	0.8	chr4	43469192	43469838	(146744717)	+	HERVK14-int	LTR/ERVK	1	643	(5453)	2857020
534	26.6	1.4	7.4	chr4	48752496	48752791	(141461764)	+	L1MC4	LINE/L1	7759	8036	(6)	2864325
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
2894	13.6	13.7	4.2	chr4	59381959	59382568	(130831987)	+	MER50B	LTR/ERV1	1	668	(29)	2876884
4614	22.6	4.2	6.8	chr4	64000553	64002059	(126212496)	C	MER4B-int	LTR/ERV1	(5947)	1628	1	2882654
4846	11.2	1.8	1.6	chr4	64002060	64002823	(126211732)	C	MER4E	LTR/ERV1	(0)	766	1	2882654
1747	18.5	3.2	0.3	chr4	64953366	64953696	(125260859)	+	MER61A	LTR/ERV1	1	341	(0)	2883788
3042	17.7	8.5	3.7	chr4	64953698	64954435	(125260120)	+	MER61-int	LTR/ERV1	1	777	(4440)	2883788
17	0.0	0.0	0.0	chr4	74000605	74000623	(116213932)	+	(TG)n	Simple_repeat	1	19	(0)	2895599
200	34.6	0.0	4.7	chr4	74106649	74106733	(116107822)	C	L2c	LINE/L2	(37)	3350	3270	2895720
420	29.6	1.0	11.6	chr4	74106782	74107014	(116107541)	+	Zaphod	DNA/hAT-Tip100	1	208	(3823)	2895721
836	13.7	0.0	0.5	chr4	75428634	75428782	(114785773)	+	MSTB	LTR/ERVL-MaLR	1	144	(288)	2897432
2280	9.2	0.7	1.0	chr4	75428788	75429081	(114785474)	+	AluSq4	SINE/Alu	1	293	(18)	2897433
2460	17.2	8.0	3.1	chr4	76233738	76234334	(113980221)	C	MER61-int	LTR/ERV1	(4510)	707	1	2898934
1918	15.6	6.2	0.9	chr4	76234335	76234657	(113979898)	C	MER61A	LTR/ERV1	(0)	341	1	2898934
1361	22.3	0.0	4.0	chr4	76234658	76234930	(113979625)	+	AluJr	SINE/Alu	31	292	(20)	2898936
702	14.2	0.0	0.9	chr4	83989319	83989432	(106225123)	+	MER49	LTR/ERV1	2	114	(809)	2910534
1802	17.1	3.8	1.2	chr4	83989433	83989764	(106224791)	+	MER61A	LTR/ERV1	1	341	(0)	2910535
2273	17.2	4.8	2.4	chr4	83989765	83990313	(106224242)	+	MER61-int	LTR/ERV1	1	563	(4654)	2910535
540	16.4	15.5	0.6	chr4	87203097	87203255	(103011300)	+	L1ME1	LINE/L1	4300	4486	(1833)	2915068
2264	9.2	3.3	0.7	chr4	87203256	87203550	(103011005)	+	AluY	SINE/Alu	1	303	(8)	2915077
500	37.4	7.2	2.2	chr4	87383298	87383663	(102830892)	C	L2c	LINE/L2	(598)	2821	2436	2915415
12	15.8	0.0	3.3	chr4	87383696	87383725	(102830830)	+	(TTG)n	Simple_repeat	1	30	(0)	2915416
6140	16.9	10.2	4.8	chr4	88244493	88245683	(101968872)	+	LTR2752	LTR/ERV1	1	1263	(0)	2916816
1002	13.9	10.5	0.0	chr4	88245684	88245870	(101968685)	+	AluJb	SINE/Alu	97	305	(7)	2916814
1414	19.5	0.9	3.1	chr4	99485992	99486247	(90728308)	+	MLT2C1	LTR/ERVL	69	316	(81)	2931735
4109	6.0	1.6	0.2	chr4	99486388	99486892	(90727663)	C	MER9a3	LTR/ERVK	(0)	512	1	2931737
850	32.2	11.4	6.5	chr4	100505351	100505816	(89708739)	+	LTR78	LTR/ERV1	465	963	(341)	2933140
6699	18.5	4.5	3.5	chr4	107746080	107747612	(82466943)	+	L1MC3	LINE/L1	6238	7785	(0)	2942454
13	21.0	2.4	2.4	chr4	121765027	121765067	(68449488)	+	GA-rich	Low_complexity	1	42	(0)	2961532
9595	16.0	2.9	1.4	chr4	122533695	122535423	(67679132)	C	ERVL-B4-int	LTR/ERVL	(3959)	1755	1	2962601
10043	13.8	0.5	0.1	chr4	124581227	124582695	(65631860)	C	MSTA-int	LTR/ERVL-MaLR	(157)	1474	1	2965470
455	36.7	7.5	9.0	chr4	124688823	124689244	(65525311)	+	L2b	LINE/L2	2961	3375	(0)	2965613
10949	12.5	1.2	1.4	chr4	128440465	128441592	(61772963)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	506	2970727
2249	13.4	0.0	0.0	chr4	128441593	128441897	(61772658)	C	AluSz6	SINE/Alu	(7)	305	1	2970728
5557	22.6	8.9	2.6	chr4	130201480	130202533	(60012022)	+	MER52D	LTR/ERV1	11	1230	(893)	2973116
4364	11.8	4.4	1.2	chr4	130202534	130203199	(60011356)	C	LTR12_	LTR/ERV1	(0)	688	1	2973117
860	22.7	5.3	0.5	chr4	134243775	134243973	(55970582)	C	MER58A	DNA/hAT-Charlie	(9)	215	7	2977871
2097	20.6	4.0	4.8	chr4	134244023	134244672	(55969883)	+	MER52D	LTR/ERV1	2	1079	(1044)	2977872
1460	16.2	9.7	2.8	chr4	142656025	142656341	(47558214)	+	MER61A	LTR/ERV1	1	341	(0)	2989233
3167	17.9	5.2	2.5	chr4	142656342	142657013	(47557542)	+	MER61-int	LTR/ERV1	1	691	(4526)	2989233
3649	15.8	1.2	2.2	chr4	144995940	144996586	(45217969)	+	L1M2a1	LINE/L1	5	645	(6471)	2992282
11498	7.0	0.4	1.4	chr4	144996567	144999368	(45215187)	+	L1P2	LINE/L1	982	3735	(2411)	2992283
10555	18.4	4.7	2.3	chr4	145357534	145359944	(44854611)	+	L1MC3	LINE/L1	5319	7764	(21)	2992793
1023	19.2	0.0	0.0	chr4	145454333	145454493	(44760062)	C	AluJo	SINE/Alu	(14)	298	138	2992931
1634	16.4	7.2	1.1	chr4	145454794	145455067	(44759488)	+	AluJr4	SINE/Alu	2	293	(19)	2992932
39	13.2	0.0	1.4	chr4	145455095	145455163	(44759392)	+	(AAGG)n	Simple_repeat	1	69	(0)	2992933
1254	25.7	1.1	0.3	chr4	145455174	145455520	(44759035)	C	L1MC5a	LINE/L1	(1263)	1514	1165	2992934
18	3.5	0.0	6.1	chr4	146175529	146175561	(44038994)	+	(TTTTG)n	Simple_repeat	1	33	(0)	2993935
13	21.9	0.0	2.6	chr4	153344509	153344553	(36870002)	+	(CCCCAG)n	Simple_repeat	1	43	(0)	3004473
11	27.0	3.6	1.8	chr4	153344683	153344737	(36869818)	+	(CCCGCG)n	Simple_repeat	1	57	(0)	3004474
4750	8.1	1.6	0.1	chr4	153693250	153693918	(36520637)	C	HERVK9-int	LTR/ERVK	(5342)	679	1	3005064
3985	6.7	0.8	0.2	chr4	153693919	153694427	(36520128)	C	MER9a3	LTR/ERVK	(0)	512	1	3005064
14	23.6	1.7	4.9	chr4	154361668	154361727	(35852828)	+	A-rich	Low_complexity	1	61	(0)	3005919
26	11.3	0.0	0.0	chr4	163955348	163955385	(26259170)	+	(A)n	Simple_repeat	1	38	(0)	3018772
1224	20.7	2.0	3.6	chr4	163955909	163956214	(26258341)	+	L1MD3	LINE/L1	7685	7985	(10)	3018773
1725	21.2	1.4	0.6	chr4	166381843	166382184	(23832371)	+	MER2	DNA/TcMar-Tigger	1	345	(0)	3022321
1716	27.9	8.4	5.7	chr4	166527039	166527303	(23687252)	+	L1M4a1	LINE/L1	26	286	(2293)	3022483
32	0.0	5.4	0.0	chr4	166527304	166527340	(23687215)	+	(AAAT)n	Simple_repeat	1	39	(0)	3022484
1716	26.3	5.1	3.8	chr4	166527341	166528064	(23686491)	+	L1M4a1	LINE/L1	287	1197	(1459)	3022483
45154	4.5	0.2	0.1	chr4	170128158	170133298	(20081257)	C	HERVK14C-int	LTR/ERVK	(2283)	5151	1	3027388
4694	6.5	0.3	0.0	chr4	170133299	170133883	(20080672)	C	LTR14C	LTR/ERVK	(0)	587	1	3027388
20	8.5	0.0	7.0	chr4	173527236	173527278	(16687277)	+	(CCT)n	Simple_repeat	1	43	(0)	3031754
3876	8.3	1.0	0.0	chr4	176343740	176344246	(13870309)	+	MER9a3	LTR/ERVK	1	512	(0)	3035422
48005	6.1	0.5	0.3	chr4	176344247	176350257	(13864298)	+	HERVK9-int	LTR/ERVK	1	6021	(0)	3035422
2174	13.4	0.0	0.0	chr4	181622394	181622692	(8591863)	+	AluSx1	SINE/Alu	1	299	(13)	3042337
223	37.9	3.9	6.0	chr4	181622952	181623136	(8591419)	C	MamTip2	DNA/hAT-Tip100	(88)	217	37	3042338
572	20.2	2.9	0.0	chr4	184040642	184040740	(6173815)	C	AluJr4	SINE/Alu	(179)	133	32	3045957
5224	9.0	0.3	0.1	chr4	184912028	184912720	(5301835)	C	HERVK14-int	LTR/ERVK	(5402)	694	1	3047371
2025	10.4	10.6	4.3	chr4	184912721	184913092	(5301463)	C	LTR14B	LTR/ERVK	(0)	608	211	3047371
1931	11.0	2.9	0.7	chr4	185126670	185126941	(5087614)	C	AluSx3	SINE/Alu	(33)	278	1	3047732
1934	16.1	2.2	0.3	chr4	185126944	185127298	(5087257)	C	L1PA17	LINE/L1	(2)	6164	5803	3047733
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
7973	10.4	3.5	1.2	chr5	11943	13334	(181524925)	C	TAR1	Satellite/telo	(43)	2068	644	3054967
294	18.5	0.0	0.0	chr5	13334	13385	(181524874)	C	MLT2B3	LTR/ERVL	(341)	213	162	3054968
1032	17.1	5.1	1.1	chr5	13386	13574	(181524685)	C	THE1C	LTR/ERVL-MaLR	(0)	375	179	3054969
25680	5.9	0.7	0.2	chr5	1581574	1584921	(179953338)	C	HERVK9-int	LTR/ERVK	(2684)	3337	72	3056381
1075	8.3	4.5	1.2	chr5	1584921	1585091	(179953168)	C	HERVK9-int	LTR/ERVK	(5844)	177	1	3056381
2152	5.1	11.7	0.0	chr5	1585092	1585387	(179952872)	C	MER9a3	LTR/ERVK	(0)	512	178	3056381
237	24.3	0.0	1.4	chr5	6353596	6353666	(175184593)	+	MLT1B	LTR/ERVL-MaLR	321	390	(0)	3061722
202	20.6	4.5	7.3	chr5	6353704	6353771	(175184488)	+	MER5A	DNA/hAT-Charlie	63	128	(61)	3061723
631	34.9	7.7	0.3	chr5	6353931	6354229	(175184030)	C	L2	LINE/L2	(2047)	1372	1050	3061724
11483	9.2	1.8	0.2	chr5	7911633	7913186	(173625073)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3063730
11640	11.6	2.1	0.9	chr5	19077843	19080995	(162457264)	C	L1P1	LINE/L1	(3182)	3279	129	3078900
11105	9.4	1.5	0.1	chr5	19080991	19082600	(162455659)	+	L1P1	LINE/L1	3302	4933	(1528)	3078900
4910	10.1	2.6	0.4	chr5	25566945	25567689	(155970570)	+	MER4E	LTR/ERV1	1	762	(4)	3087481
1936	13.3	0.7	0.7	chr5	25567694	25567989	(155970270)	+	PABL_A-int	LTR/ERV1	1	296	(6462)	3087481
2660	14.4	13.7	2.1	chr5	25567990	25568982	(155969277)	+	PABL_A-int	LTR/ERV1	752	2485	(4113)	3087481
1355	21.1	2.0	3.7	chr5	26760213	26760561	(154777698)	+	MLT1A0	LTR/ERVL-MaLR	23	365	(0)	3088955
2201	17.4	1.7	1.4	chr5	27472074	27472487	(154065772)	+	MER61C	LTR/ERV1	14	428	(0)	3089960
747	22.1	2.8	7.1	chr5	27472488	27472711	(154065548)	+	MER61-int	LTR/ERV1	2	215	(5002)	3089960
26855	14.1	3.7	2.8	chr5	27472715	27477542	(154060717)	+	MER61-int	LTR/ERV1	343	5213	(4)	3089960
4627	12.6	2.4	3.9	chr5	27815928	27816718	(153721541)	C	LTR17	LTR/ERV1	(0)	780	2	3090401
9730	7.5	10.3	6.3	chr5	31691018	31692528	(149845731)	C	LTR12C	LTR/ERV1	(0)	1579	3	3095373
1581	15.7	4.0	5.7	chr5	34182319	34182469	(147355790)	+	AluJo	SINE/Alu	126	275	(37)	3099474
53	0.0	2.0	0.0	chr5	34182475	34182525	(147355734)	+	(AAAT)n	Simple_repeat	1	52	(0)	3099476
3114	2.2	0.0	0.3	chr5	35722484	35722849	(145815410)	C	L1PA2	LINE/L1	(0)	6155	5791	3101794
3062	16.7	6.7	5.2	chr5	35722850	35722903	(145815356)	C	MER61-int	LTR/ERV1	(5163)	54	1	3101792
1554	11.9	16.4	1.7	chr5	35722904	35723193	(145815066)	C	MER61A	LTR/ERV1	(0)	341	1	3101792
769	20.2	8.5	1.5	chr5	41475163	41475358	(140062901)	C	HERVK3-int	LTR/ERVK	(6977)	225	15	3110451
33	5.1	0.0	0.0	chr5	41475394	41475434	(140062825)	+	(TCTGCTAGTC)n	Simple_repeat	1	41	(0)	3110452
392	15.3	11.1	1.4	chr5	41475665	41475737	(140062522)	C	LTR3B_	LTR/ERVK	(0)	499	419	3110451
2021	12.2	1.3	0.7	chr5	41475747	41476042	(140062217)	C	LTR3B_	LTR/ERVK	(17)	482	185	3110453
4226	6.2	0.0	1.5	chr5	52304484	52305004	(129233255)	+	MER9a2	LTR/ERVK	1	513	(0)	3118824
20683	7.2	1.7	1.2	chr5	52305005	52305764	(129232495)	+	HERVK9-int	LTR/ERVK	1	779	(5242)	3118824
28225	11.4	5.5	3.6	chr5	53200709	53203471	(128334788)	+	HERVH48-int	LTR/ERV1	1	2799	(3855)	3119967
11265	16.3	5.9	6.6	chr5	53209495	53212592	(128325667)	C	MER4B-int	LTR/ERV1	(3685)	3073	1	3119972
5240	8.9	2.0	1.3	chr5	53212593	53213353	(128324906)	C	MER4E	LTR/ERV1	(0)	766	1	3119972
8125	12.2	6.5	1.0	chr5	59289425	59291718	(122246541)	+	L1MA3	LINE/L1	5295	7724	(0)	3129324
10239	10.4	7.5	0.1	chr5	68210207	68211669	(113326590)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3141930
2169	13.4	3.6	3.3	chr5	68211670	68212032	(113326227)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3141930
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
2497	8.8	7.9	5.2	chr5	76396558	76396681	(105141578)	C	LTR23	LTR/ERV1	(299)	138	1	3154956
191	33.0	10.4	3.7	chr5	76396732	76396838	(105141421)	C	L2	LINE/L2	(640)	2779	2665	3154959
541	25.6	2.8	2.1	chr5	76818372	76818511	(104719748)	+	MIRb	SINE/MIR	81	221	(47)	3155687
2696	3.6	0.3	0.3	chr5	82726561	82726863	(98811396)	+	AluYe5	SINE/Alu	1	303	(7)	3165026
30	22.3	0.0	0.0	chr5	92364852	92364914	(89173345)	+	(T)n	Simple_repeat	1	63	(0)	3177370
10023	6.6	8.9	0.3	chr5	92631148	92632588	(88905671)	+	LTR12C	LTR/ERV1	3	1579	(0)	3177692
1702	17.8	1.9	5.1	chr5	92632589	92632788	(88905471)	C	L1MA7	LINE/L1	(186)	6105	5914	3177691
432	25.3	11.0	3.0	chr5	101629071	101629270	(79908989)	+	LTR35B	LTR/ERV1	301	518	(87)	3189132
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
3198	17.3	6.3	2.5	chr5	116347899	116348570	(65189689)	C	MER61-int	LTR/ERV1	(4517)	700	2	3208005
1614	12.9	13.8	2.0	chr5	116348572	116348871	(65189388)	C	MER61A	LTR/ERV1	(0)	341	1	3208005
31	19.6	2.6	1.2	chr5	116348873	116348950	(65189309)	+	GA-rich	Low_complexity	1	80	(0)	3208006
4219	15.0	3.8	0.5	chr5	119664508	119665296	(61872963)	C	MER51-int	LTR/ERV1	(6310)	1506	691	3212617
1036	6.5	7.2	0.0	chr5	119665352	119665505	(61872754)	C	MER51B	LTR/ERV1	(0)	377	212	3212617
9819	11.1	3.2	7.2	chr5	120022580	120024228	(61514031)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3213024
778	28.1	4.2	5.0	chr5	135560576	135560815	(45977444)	C	MIRb	SINE/MIR	(30)	238	1	3234473
181	28.1	1.7	1.7	chr5	136462694	136462751	(45075508)	+	L2c	LINE/L2	3107	3164	(223)	3235709
2506	6.3	0.0	0.3	chr5	136462971	136463270	(45074989)	C	AluY	SINE/Alu	(12)	299	1	3235710
471	17.5	8.7	4.9	chr5	143191554	143191697	(38346562)	+	MER113A	DNA/hAT-Charlie	157	306	(8)	3247294
1866	17.9	0.0	0.0	chr5	147791640	147791929	(33746330)	C	AluJr	SINE/Alu	(11)	301	12	3254852
1851	14.9	5.3	2.4	chr5	148001641	148001971	(33536288)	+	MER61A	LTR/ERV1	1	341	(0)	3255210
3269	17.2	9.7	3.0	chr5	148001972	148002698	(33535561)	+	MER61-int	LTR/ERV1	1	777	(4440)	3255210
501	14.1	7.6	0.0	chr5	150450124	150450208	(31088051)	+	FLAM_A	SINE/Alu	10	101	(41)	3259966
240	29.4	8.7	4.2	chr5	150450261	150450402	(31087857)	C	MIRb	SINE/MIR	(0)	262	114	3259967
4615	14.6	1.9	0.8	chr5	154642910	154643647	(26894612)	C	HERVK-int	LTR/ERVK	(6790)	746	1	3267663
7899	7.6	0.5	1.3	chr5	154643648	154644655	(26893604)	C	LTR5B	LTR/ERVK	(0)	1002	3	3267663
11180	11.1	2.4	0.2	chr5	158034772	158036321	(23501938)	+	THE1D-int	LTR/ERVL-MaLR	2	1586	(45)	3273891
21	11.5	2.6	0.0	chr5	159820507	159820545	(21717714)	+	(TTCT)n	Simple_repeat	1	40	(0)	3276778
1796	11.8	1.0	10.0	chr5	159820547	159820876	(21717383)	C	AluSz	SINE/Alu	(11)	301	2	3276779
535	19.3	9.2	0.0	chr5	159820878	159820986	(21717273)	+	MER96	DNA/hAT-Tip100	43	162	(13)	3276780
630	27.1	1.7	5.7	chr5	173753118	173753376	(7784883)	C	MIRb	SINE/MIR	(1)	267	12	3300214
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2219	12.0	0.3	0.3	chr5	180486567	180486865	(1051394)	C	AluSq2	SINE/Alu	(14)	299	1	3312758
243	30.6	13.6	5.1	chr5	180486866	180487057	(1051202)	+	MLT1K	LTR/ERVL-MaLR	93	313	(282)	3312757
671	1.3	0.0	0.0	chr5	181207755	181207830	(330429)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	3313853
2402	17.8	6.6	8.2	chr5	181208006	181208641	(329618)	C	L1MB3	LINE/L1	(4)	6179	5555	3313854
2041	18.2	12.6	5.0	chr6	4488509	4489010	(166316969)	C	LTR10B1	LTR/ERV1	(1)	546	1	3320522
4689	9.0	1.0	0.1	chr6	6067438	6068104	(164737875)	C	HERVK9-int	LTR/ERVK	(5348)	673	1	3322951
3632	6.7	4.5	0.2	chr6	6068105	6068594	(164737385)	C	MER9a3	LTR/ERVK	(0)	512	1	3322951
9811	9.4	0.7	0.9	chr6	6068595	6068609	(164737370)	C	L1P2	LINE/L1	(2519)	3627	3617	3322952
2760	0.4	0.0	0.0	chr6	6068610	6068946	(164737033)	C	AluYa5	SINE/Alu	(0)	311	1	3322953
276	36.1	5.4	0.0	chr6	7445382	7445503	(163360476)	C	L2c	LINE/L2	(564)	2855	2727	3325158
3446	27.8	8.7	5.6	chr6	7659802	7661464	(163144515)	C	ERV3-16A3_I-int	LTR/ERVL	(3138)	2088	370	3325530
247	25.0	5.2	5.2	chr6	10887637	10887771	(159918208)	C	MER5B	DNA/hAT-Charlie	(30)	148	14	3330390
488	26.3	0.0	5.6	chr6	10887955	10888066	(159917913)	C	MIRb	SINE/MIR	(6)	262	156	3330391
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
2304	9.8	0.3	1.0	chr6	11045133	11045437	(159760542)	+	AluJb	SINE/Alu	4	306	(6)	3330625
578	20.7	5.2	2.0	chr6	12285981	12286170	(158519809)	+	MER113	DNA/hAT-Charlie	362	520	(1)	3332450
2269	9.2	0.3	0.3	chr6	13171774	13172066	(157633913)	C	AluSq2	SINE/Alu	(20)	293	1	3333812
291	32.6	5.2	8.1	chr6	16705784	16706080	(154099899)	+	L2b	LINE/L2	2701	2988	(431)	3339937
322	33.3	4.8	1.0	chr6	16706286	16706385	(154099594)	+	L2b	LINE/L2	3271	3374	(1)	3339937
13	24.0	0.0	0.0	chr6	16706391	16706425	(154099554)	+	GA-rich	Low_complexity	1	35	(0)	3339938
230	29.2	11.1	2.0	chr6	16706426	16706442	(154099537)	C	MIR3	SINE/MIR	(66)	142	124	3339939
2264	12.6	0.3	0.3	chr6	16706443	16706752	(154099227)	+	AluSx3	SINE/Alu	1	310	(1)	3339940
1271	28.1	1.7	10.3	chr6	19211148	19211805	(151594174)	C	L1PA13	LINE/L1	(5901)	884	285	3344123
10027	8.5	10.8	3.6	chr6	20301081	20302540	(150503439)	+	LTR12C	LTR/ERV1	3	1579	(0)	3345774
228	26.4	5.7	2.6	chr6	23858633	23858777	(146947202)	+	L2c	LINE/L2	3006	3153	(222)	3351083
924	25.2	4.5	1.3	chr6	33038753	33038989	(137766990)	C	Arthur1	DNA/hAT-Tip100	(3594)	353	109	3365792
280	32.5	4.5	2.9	chr6	37785569	37785742	(133020237)	+	L2a	LINE/L2	2732	2908	(511)	3375354
334	29.5	10.5	6.0	chr6	37785817	37786103	(133019876)	+	L2a	LINE/L2	3051	3399	(27)	3375354
837	20.8	13.9	2.5	chr6	40187726	40187922	(130618057)	C	MER58A	DNA/hAT-Charlie	(1)	223	1	3379059
366	23.9	10.1	1.0	chr6	40588238	40588372	(130217607)	C	MIRb	SINE/MIR	(35)	233	71	3379734
1905	17.7	1.8	7.8	chr6	40664907	40665316	(130140663)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	6	3379874
352	18.5	0.0	0.0	chr6	42563659	42563723	(128242256)	C	L2a	LINE/L2	(24)	3402	3338	3383531
187	20.6	2.7	6.4	chr6	45626302	45626379	(125179600)	+	L3	LINE/CR1	2016	2090	(2009)	3388905
6442	6.5	0.6	0.0	chr6	49506827	49507681	(121298298)	C	HERVK11D-int	LTR/ERVK	(6892)	860	1	3394448
6826	6.0	2.9	2.0	chr6	49507682	49508054	(121297925)	C	MER11D	LTR/ERVK	(0)	897	514	3394448
2404	23.1	14.7	1.7	chr6	52650524	52651036	(118154943)	+	L1MD2	LINE/L1	4	590	(5957)	3398884
1920	20.3	2.6	2.1	chr6	52651037	52651454	(118154525)	+	LTR52	LTR/ERVL	1	420	(1)	3398885
2404	23.1	14.7	1.7	chr6	52651455	52651591	(118154388)	+	L1MD2	LINE/L1	591	753	(5794)	3398884
8037	8.1	0.7	0.0	chr6	60654987	60656012	(110149967)	+	LTR5A	LTR/ERVK	1	1033	(0)	3407442
3744	16.8	2.5	2.3	chr6	60656013	60656707	(110149272)	+	HERVK-int	LTR/ERVK	1	696	(6840)	3407442
2496	10.9	4.5	2.4	chr6	66330682	66331096	(104474883)	C	L1PREC2	LINE/L1	(0)	6160	5737	3414157
1175	7.8	2.7	1.1	chr6	66331097	66331277	(104474702)	C	HERVK9-int	LTR/ERVK	(5837)	184	1	3414158
3807	5.3	4.3	2.0	chr6	66331278	66331778	(104474201)	C	MER9a1	LTR/ERVK	(0)	513	1	3414158
1922	16.2	6.5	7.2	chr6	66897684	66898042	(103907937)	+	LTR18A	LTR/ERVL	2	357	(0)	3414848
2936	1.6	0.0	0.0	chr6	67061969	67062279	(103743700)	C	AluYa5	SINE/Alu	(0)	311	1	3415059
2403	6.3	0.0	0.7	chr6	67062280	67062593	(103743386)	C	AluY	SINE/Alu	(0)	311	1	3415060
522	34.3	9.6	2.6	chr6	69820050	69820399	(100985580)	+	MamGypLTR3a	LTR/Gypsy	594	970	(11)	3418460
1434	17.3	0.0	0.8	chr6	71470374	71470641	(99335338)	C	L1PB4	LINE/L1	(8)	6148	5883	3420613
1707	13.9	5.0	9.2	chr6	76025941	76026297	(94779682)	+	MER61A	LTR/ERV1	1	341	(0)	3427192
2449	15.8	5.7	3.9	chr6	76026299	76026837	(94779142)	+	MER61-int	LTR/ERV1	1	549	(4668)	3427192
2562	12.1	1.8	0.0	chr6	78682461	78682839	(92123140)	C	MER61-int	LTR/ERV1	(1873)	3344	2959	3430283
1827	14.9	5.3	1.8	chr6	78682872	78683200	(92122779)	C	MER61A	LTR/ERV1	(0)	341	1	3430284
3211	16.6	2.8	0.2	chr6	78683201	78683718	(92122261)	+	MER41E	LTR/ERV1	52	583	(12)	3430285
27	10.8	0.0	0.0	chr6	84371755	84371794	(86434185)	+	(TG)n	Simple_repeat	1	40	(0)	3437770
382	34.7	4.8	8.1	chr6	87765176	87765498	(83040481)	C	L2b	LINE/L2	(0)	3375	3064	3442166
27	3.1	0.0	2.9	chr6	87765499	87765533	(83040446)	+	(AGGTTG)n	Simple_repeat	1	35	(0)	3442167
2068	11.2	0.0	0.0	chr6	87765534	87765800	(83040179)	+	AluSx1	SINE/Alu	14	280	(32)	3442168
1098	16.3	13.4	2.6	chr6	88965588	88965820	(81840159)	C	AluJb	SINE/Alu	(20)	292	31	3443859
1789	16.1	5.3	0.9	chr6	88965821	88966146	(81839833)	+	MER61A	LTR/ERV1	1	341	(0)	3443860
26333	15.4	7.2	1.7	chr6	88966149	88966708	(81839271)	+	MER61-int	LTR/ERV1	1396	1480	(3737)	3443860
8744	9.7	0.2	0.4	chr6	95888055	95889241	(74916738)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	396	3453009
357	25.2	6.3	1.6	chr6	97079082	97079202	(73726777)	C	Chap1_Mam	DNA/hAT-Charlie	(126)	216	90	3454518
1147	24.6	4.1	3.3	chr6	102843987	102844392	(67961587)	+	MLT2C1	LTR/ERVL	1	538	(17)	3462026
1708	20.0	1.0	0.9	chr6	107083934	107084323	(63721656)	+	L1MC1	LINE/L1	1	348	(6160)	3468153
5353	9.1	4.2	4.2	chr6	107084325	107085379	(63720600)	+	LTR12	LTR/ERV1	57	1579	(0)	3468155
14	20.5	2.6	0.0	chr6	107114957	107114995	(63690984)	+	(CCCCCT)n	Simple_repeat	1	40	(0)	3468217
17	15.4	4.4	2.1	chr6	107115023	107115067	(63690912)	+	(GCC)n	Simple_repeat	1	47	(0)	3468218
14	19.5	0.0	2.7	chr6	109441043	109441079	(61364900)	+	(CGC)n	Simple_repeat	1	37	(0)	3472169
1069	16.4	0.0	0.0	chr6	110560906	110561070	(60244909)	+	AluJo	SINE/Alu	137	301	(11)	3473855
493	28.6	12.8	1.9	chr6	110561352	110561608	(60244371)	C	L2a	LINE/L2	(5)	3421	3133	3473856
11363	10.6	0.3	0.1	chr6	112608461	112610036	(58195943)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3477329
4349	8.5	0.7	0.2	chr6	113267407	113267983	(57537996)	C	HERVK9-int	LTR/ERVK	(5441)	580	1	3478186
3989	6.6	0.6	0.2	chr6	113267984	113268482	(57537497)	C	MER9a3	LTR/ERVK	(0)	512	12	3478186
16	0.0	0.0	4.2	chr6	113971649	113971672	(56834307)	+	(TTA)n	Simple_repeat	1	24	(0)	3479423
11	18.8	4.3	4.2	chr6	117482790	117482835	(53323144)	+	(CGGCGG)n	Simple_repeat	1	48	(0)	3483950
23	25.6	3.5	1.1	chr6	117482937	117483021	(53322958)	+	G-rich	Low_complexity	1	88	(0)	3483951
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
959	29.8	1.5	4.0	chr6	119771133	119771478	(51034501)	C	HERVI-int	LTR/ERV1	(7439)	346	10	3486989
3421	11.3	1.8	0.4	chr6	119771487	119771992	(51033987)	C	LTR10D	LTR/ERV1	(0)	513	1	3486989
20140	9.2	0.9	4.2	chr6	121622753	121625850	(49180129)	C	HERVH-int	LTR/ERV1	(4718)	2995	1	3489344
3274	6.5	0.9	0.9	chr6	121625853	121626300	(49179679)	C	LTR7	LTR/ERV1	(2)	448	1	3489344
453	20.8	42.1	3.6	chr6	122628934	122629138	(48176841)	C	LTR16	LTR/ERVL	(153)	285	1	3490647
4267	16.6	5.6	1.2	chr6	122629282	122630122	(48175857)	+	L1MC3	LINE/L1	6885	7764	(21)	3490648
16731	13.0	1.6	0.9	chr6	122955936	122960669	(47845310)	+	L1PBa	LINE/L1	3	5446	(1416)	3491095
1172	21.4	4.2	1.9	chr6	125078414	125078688	(45727291)	C	MSTD	LTR/ERVL-MaLR	(50)	382	65	3493811
37	7.2	1.6	1.6	chr6	131054357	131054417	(39751562)	+	(TCTGCTAGTC)n	Simple_repeat	1	62	(0)	3501759
3467	10.4	1.6	0.6	chr6	131054619	131055112	(39750867)	C	LTR3B_	LTR/ERVK	(0)	499	1	3501760
26214	3.0	0.1	0.1	chr6	133142074	133148104	(37657875)	C	L1PA3	LINE/L1	(1)	6154	127	3504855
13	10.4	2.9	5.6	chr6	136792031	136792065	(34013914)	+	(CCTCGC)n	Simple_repeat	1	36	(0)	3510465
366	25.3	15.6	5.9	chr6	137598948	137599149	(33206830)	C	MamGypLTR3a	LTR/Gypsy	(8)	973	749	3511677
570	34.3	7.8	4.2	chr6	137599161	137599811	(33206168)	C	MamGypLTR3a	LTR/Gypsy	(281)	700	24	3511677
378	30.9	2.5	5.6	chr6	142822880	142823164	(27982815)	C	LTR88b	LTR/Gypsy?	(17)	820	545	3519034
4664	21.2	7.4	2.2	chr6	142823209	142824461	(27981518)	+	Zaphod	DNA/hAT-Tip100	18	1340	(2691)	3519035
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
519	34.1	4.5	5.3	chr6	143591783	143592008	(27213971)	+	MER115	DNA/hAT-Tip100	123	346	(347)	3520139
470	35.1	3.9	6.2	chr6	144112393	144112921	(26693058)	C	HERV16-int	LTR/ERVL	(655)	4571	4056	3520877
1045	19.7	0.6	1.7	chr6	144214749	144214926	(26591053)	C	FAM	SINE/Alu	(9)	176	1	3521043
327	22.0	1.2	3.5	chr6	144214928	144215012	(26590967)	+	MIR	SINE/MIR	179	261	(1)	3521044
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
434	22.7	15.7	0.7	chr6	156029790	156029940	(14776039)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	3538909
35278	7.8	2.6	1.8	chr6	158298564	158302141	(12503838)	C	HERVK11-int	LTR/ERVK	(747)	7206	3550	3542317
15	18.8	6.2	5.8	chr6	159169709	159169789	(11636190)	+	(CGCTCCG)n	Simple_repeat	1	86	(0)	3543747
2045	15.7	2.7	5.0	chr6	161015500	161015915	(9790064)	C	MSTB1	LTR/ERVL-MaLR	(26)	406	1	3546096
516	20.3	1.3	1.3	chr6	161015916	161016043	(9789936)	C	L1MC5a	LINE/L1	(391)	5783	5685	3546097
2827	18.7	8.3	0.6	chr6	161016024	161016805	(9789174)	C	L1MC5a	LINE/L1	(665)	5519	4677	3546097
1455	19.6	7.1	3.0	chr6	162402647	162402942	(8403037)	C	AluJo	SINE/Alu	(3)	309	1	3548099
560	30.0	8.5	4.1	chr6	162402943	162403013	(8402966)	+	Charlie2b	DNA/hAT-Charlie	406	476	(2306)	3548098
314	23.9	10.0	1.7	chr6	162403014	162403132	(8402847)	+	L2a	LINE/L2	2281	2410	(1009)	3548100
862	26.5	13.0	3.9	chr6	162403184	162403642	(8402337)	+	L2a	LINE/L2	2912	3418	(8)	3548100
15	13.2	2.9	2.8	chr6	162727299	162727333	(8078646)	+	(GGC)n	Simple_repeat	1	36	(0)	3548581
1459	16.2	7.2	0.7	chr6	168563511	168563809	(2242170)	+	MLT1A0	LTR/ERVL-MaLR	1	320	(45)	3555593
192	24.5	11.3	4.1	chr6	169005928	169006025	(1799954)	+	MIRb	SINE/MIR	134	239	(29)	3556047
231	25.4	4.1	0.0	chr6	170256900	170256970	(549009)	C	MER5A1	DNA/hAT-Charlie	(0)	166	93	3557260
46	2.3	0.0	0.0	chr7	2945728	2945771	(156400202)	+	(AC)n	Simple_repeat	1	44	(0)	3562338
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
17	0.0	0.0	0.0	chr7	21108337	21108355	(138237618)	+	(GT)n	Simple_repeat	1	19	(0)	3588731
2437	12.5	0.0	0.0	chr7	21534066	21534377	(137811596)	C	AluSz6	SINE/Alu	(0)	312	1	3589413
22676	10.8	2.2	1.8	chr7	21534378	21535656	(137810317)	C	L1PA11	LINE/L1	(3305)	4276	2980	3589412
8819	18.5	9.6	2.3	chr7	23096810	23098433	(136247540)	+	MER52A	LTR/ERV1	1	1755	(0)	3591717
1040	16.5	5.9	1.0	chr7	24587944	24588151	(134757822)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3594132
21	23.8	1.1	6.6	chr7	25180367	25180462	(134165511)	+	(GCCCC)n	Simple_repeat	1	90	(0)	3595066
1993	14.1	3.8	0.6	chr7	30718256	30718583	(128627390)	C	HERVK-int	LTR/ERVK	(7197)	339	1	3603535
8120	6.1	0.9	1.3	chr7	30718584	30719589	(128626384)	C	LTR5B	LTR/ERVK	(0)	1002	1	3603535
1676	14.7	0.7	10.8	chr7	33056357	33056689	(126289284)	+	AluJo	SINE/Alu	3	301	(11)	3607281
239	33.1	1.1	5.4	chr7	34249732	34249916	(125096057)	+	Tigger20a	DNA/TcMar-Tigger	174	350	(623)	3609013
288	26.4	3.1	1.6	chr7	34250237	34250371	(125095602)	C	L1ME3	LINE/L1	(0)	6173	6037	3609014
17	22.8	3.1	3.0	chr7	35254198	35254262	(124091711)	+	G-rich	Low_complexity	1	67	(0)	3610384
437	21.2	5.2	6.4	chr7	36760064	36760219	(122585754)	C	Charlie16a	DNA/hAT-Charlie	(101)	241	88	3612780
37	2.3	2.1	2.1	chr7	36760476	36760522	(122585451)	+	(TTTC)n	Simple_repeat	1	48	(0)	3612781
1218	13.0	7.4	4.3	chr7	36760523	36760730	(122585243)	C	AluJb	SINE/Alu	(8)	304	90	3612782
696	15.8	0.8	1.3	chr7	37847105	37848371	(121497602)	+	GA-rich	Low_complexity	1	1277	(0)	3614322
377	29.8	6.8	0.8	chr7	41855096	41855220	(117490753)	C	MIRc	SINE/MIR	(113)	155	23	3620437
306	28.4	4.9	0.8	chr7	41855423	41855539	(117490434)	+	MER5A1	DNA/hAT-Charlie	1	122	(44)	3620438
569	12.5	0.0	0.0	chr7	43825341	43825420	(115520553)	+	HERVK22-int	LTR/ERVK	3474	3553	(3284)	3623224
908	15.3	0.7	0.0	chr7	43825417	43825596	(115520377)	+	HERVK22-int	LTR/ERVK	2027	2177	(3085)	3623224
321	6.5	2.1	0.0	chr7	43825613	43825658	(115520315)	+	LTR3A	LTR/ERVK	434	480	(4)	3623230
1654	17.8	2.9	2.6	chr7	47053936	47054244	(112291729)	C	AluSx1	SINE/Alu	(1)	311	2	3628044
2177	11.8	6.4	1.4	chr7	55657556	55657909	(103688064)	C	THE1C	LTR/ERVL-MaLR	(2)	373	1	3638940
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1613	15.1	9.3	0.4	chr7	64445535	64445799	(94900174)	C	AluSx1	SINE/Alu	(21)	291	1	3646284
51583	14.8	1.2	1.3	chr7	64990916	64999343	(94346630)	C	HERV3-int	LTR/ERV1	(0)	8426	2	3647034
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
2145	12.3	0.3	1.6	chr7	71256290	71256605	(88089368)	+	AluSz	SINE/Alu	1	312	(0)	3659821
3103	14.1	3.7	5.2	chr7	71256606	71256717	(88089256)	+	MER4B	LTR/ERV1	485	574	(36)	3659820
277	31.2	0.0	0.0	chr7	71256986	71257065	(88088908)	C	L3	LINE/CR1	(56)	4043	3964	3659822
520	31.2	0.6	4.0	chr7	74062361	74062537	(85283436)	+	MIR	SINE/MIR	65	235	(27)	3666089
438	34.7	3.4	3.4	chr7	81242260	81242614	(78103359)	C	LTR84a	LTR/ERVL	(24)	733	379	3679287
1914	27.1	10.8	2.0	chr7	84705011	84705707	(74640266)	C	LTR41	LTR/ERVL	(0)	768	3	3683878
1879	17.0	1.3	1.3	chr7	84705740	84706039	(74639934)	+	AluJr	SINE/Alu	11	310	(2)	3683879
3629	18.9	6.8	2.2	chr7	87870440	87871214	(71474759)	+	LTR1E	LTR/ERV1	1	886	(13)	3687762
1251	23.3	3.1	8.6	chr7	87871236	87871573	(71474400)	+	MLT1F2	LTR/ERVL-MaLR	233	551	(9)	3687761
7606	6.7	12.7	0.4	chr7	97140488	97141570	(62204403)	+	MER11B	LTR/ERVK	1	1236	(0)	3700327
1237	5.3	0.0	2.6	chr7	97141571	97141581	(62204392)	C	AluY	SINE/Alu	(154)	157	150	3700326
441	2.0	0.0	0.0	chr7	97141582	97141630	(62204343)	C	tRNA-Lys-AAG	tRNA	(9)	67	19	3700328
1025	8.6	2.1	0.7	chr7	97141632	97141771	(62204202)	C	AluY	SINE/Alu	(147)	164	23	3700326
2183	7.5	1.4	0.3	chr7	99373621	99373912	(59972061)	C	AluSc8	SINE/Alu	(16)	295	1	3704600
13	24.6	5.1	1.6	chr7	100827218	100827276	(58518697)	+	G-rich	Low_complexity	1	62	(0)	3707461
1656	17.9	1.0	4.5	chr7	101846852	101847163	(57498810)	+	AluJr	SINE/Alu	2	302	(10)	3709798
311	28.2	10.3	7.1	chr7	101847408	101847575	(57498398)	+	MIRb	SINE/MIR	18	191	(77)	3709799
296	31.6	12.7	2.5	chr7	102513092	102513373	(56832600)	+	L2b	LINE/L2	3056	3370	(5)	3711170
8680	1.8	0.1	0.0	chr7	104747922	104748888	(54597085)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3714547
33350	1.4	0.0	0.1	chr7	104748902	104752819	(54593154)	C	HERVK-int	LTR/ERVK	(3617)	3919	4	3714548
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
357	13.2	0.0	0.0	chr7	112621339	112621391	(46724582)	C	AluSq2	SINE/Alu	(10)	303	251	3726093
946	7.3	0.0	0.0	chr7	112621404	112621513	(46724460)	C	AluSq10	SINE/Alu	(203)	110	1	3726094
1796	17.0	0.3	3.9	chr7	122854079	122854384	(36491589)	+	AluJb	SINE/Alu	2	296	(16)	3739639
600	28.8	12.4	0.0	chr7	128101665	128101834	(31244139)	+	MER117	DNA/hAT-Charlie	1	194	(3)	3746605
196	20.7	16.3	4.7	chr7	128101881	128101966	(31244007)	C	L3	LINE/CR1	(64)	4035	3938	3746606
776	17.1	6.2	0.7	chr7	128102313	128102465	(31243508)	C	MER5A1	DNA/hAT-Charlie	(0)	166	5	3746607
668	23.0	7.9	10.7	chr7	128696841	128697074	(30648899)	+	MER20B	DNA/hAT-Charlie	187	413	(370)	3747812
902	4.7	0.0	0.0	chr7	128697452	128697558	(30648415)	+	5S	rRNA	15	121	(0)	3747813
445	3.7	0.0	0.0	chr7	128697691	128697744	(30648229)	+	5S	rRNA	3	56	(65)	3747814
3294	26.4	5.5	5.1	chr7	128705257	128705655	(30640318)	C	L1MC4	LINE/L1	(282)	7600	7157	3747831
1863	13.2	3.9	0.4	chr7	128705656	128705954	(30640019)	C	AluJr	SINE/Alu	(0)	312	1	3747832
3294	23.9	2.7	4.9	chr7	128705955	128706665	(30639308)	C	L1MC4	LINE/L1	(884)	7158	6464	3747831
2070	10.4	3.1	0.0	chr7	129938445	129938723	(29407250)	+	AluSp	SINE/Alu	13	300	(13)	3750146
2354	10.6	0.3	0.0	chr7	129938788	129939098	(29406875)	C	AluSx1	SINE/Alu	(0)	312	1	3750147
13	22.6	2.4	0.0	chr7	131109595	131109635	(28236338)	+	(ACCCCC)n	Simple_repeat	1	42	(0)	3752138
18	25.3	1.7	1.7	chr7	131110039	131110096	(28235877)	+	GA-rich	Low_complexity	1	59	(0)	3752139
2264	11.7	3.7	1.9	chr7	134924720	134925093	(24420880)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3758244
225	20.8	15.9	0.0	chr7	139816941	139816993	(19528980)	+	MER91B	DNA/hAT-Tip100	96	158	(32)	3766241
188	36.8	0.6	0.0	chr7	139817379	139817497	(19528476)	+	L2a	LINE/L2	2872	2992	(427)	3766242
6905	11.0	1.2	2.2	chr7	141751126	141752103	(17593870)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	3769774
25017	7.0	0.9	0.3	chr7	141752118	141755274	(17590699)	C	HERVK-int	LTR/ERVK	(3618)	3918	743	3769775
1364	14.9	6.0	0.4	chr7	145033480	145033714	(14312259)	C	MSTB1	LTR/ERVL-MaLR	(1)	431	183	3774091
8412	10.7	1.9	0.7	chr7	145033719	145035730	(14310243)	C	L1PA16	LINE/L1	(9)	6157	4126	3774092
1079	29.3	3.2	5.0	chr7	145330782	145331162	(14014811)	+	LTR16A1	LTR/ERVL	12	385	(71)	3774494
1697	18.3	16.0	3.0	chr7	148527519	148527817	(10818156)	C	MER66C	LTR/ERV1	(109)	446	76	3778942
270	14.6	2.0	0.0	chr7	148527824	148527871	(10818102)	C	MER66C	LTR/ERV1	(444)	111	63	3778942
1269	12.6	3.5	0.0	chr7	148527883	148528073	(10817900)	+	MER4D1	LTR/ERV1	706	903	(0)	3778941
2249	17.2	1.2	3.4	chr7	149569356	149570100	(9775873)	+	HERVIP10FH-int	LTR/ERV1	28	842	(4260)	3780869
31	25.2	0.0	4.2	chr7	149570328	149570423	(9775550)	+	GA-rich	Low_complexity	1	96	(0)	3780870
1439	11.9	3.1	0.8	chr7	149570437	149570690	(9775283)	+	Harlequin-int	LTR/ERV1	2023	2282	(2820)	3780871
18146	7.4	3.4	1.6	chr7	149650724	149651480	(9694493)	C	HERVK9-int	LTR/ERVK	(3520)	791	1	3780988
3936	6.0	3.1	0.2	chr7	149651481	149651977	(9693996)	C	MER9a3	LTR/ERVK	(0)	512	1	3780990
16087	13.5	3.7	0.5	chr7	152048750	152051180	(7294793)	C	L1MA3	LINE/L1	(5042)	2523	13	3784466
2102	13.9	0.3	0.3	chr7	152938392	152938700	(6407273)	C	AluSz	SINE/Alu	(3)	309	1	3786231
369	24.1	7.9	0.0	chr7	152938736	152938851	(6407122)	+	MER102a	DNA/hAT-Charlie	77	202	(128)	3786232
2135	6.2	2.9	1.1	chr7	156949219	156949490	(2396483)	C	AluSx	SINE/Alu	(35)	277	1	3791613
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
540	23.9	8.5	6.0	chr8	229378	229693	(144908943)	C	TAR1	Satellite/telo	(94)	323	1	3794606
252	27.1	1.0	1.0	chr8	229896	229992	(144908644)	+	L1MD	LINE/L1	4924	5020	(1126)	3794607
32	22.7	0.0	6.8	chr8	688255	688371	(144450265)	+	(CCCCG)n	Simple_repeat	1	117	(0)	3795081
1148	30.1	2.7	2.3	chr8	13986446	13986879	(131151757)	C	LTR16B1	LTR/ERVL	(0)	463	28	3813436
4164	17.2	2.5	4.0	chr8	20054256	20054609	(125084027)	C	MER21B	LTR/ERVL	(147)	721	376	3822182
10066	7.4	10.8	2.9	chr8	20054610	20056058	(125082578)	+	LTR12C	LTR/ERV1	3	1579	(0)	3822184
21269	5.5	1.3	0.2	chr8	30148797	30151388	(114987248)	C	HERVK9-int	LTR/ERVK	(3402)	2619	1	3839148
4257	5.0	1.6	0.0	chr8	30151389	30151892	(114986744)	C	MER9a3	LTR/ERVK	(0)	512	1	3839148
226	34.9	2.7	1.8	chr8	37206888	37206998	(107931638)	+	MamTip2	DNA/hAT-Tip100	140	251	(54)	3849992
333	24.1	3.5	13.2	chr8	38975233	38975361	(106163275)	C	MIRc	SINE/MIR	(133)	135	20	3853308
16	21.7	0.0	0.0	chr8	41490123	41490154	(103648482)	+	(T)n	Simple_repeat	1	32	(0)	3857097
222	11.5	6.9	4.2	chr8	47763673	47764235	(97374401)	+	(GT)n	Simple_repeat	1	602	(0)	3862367
5133	26.0	10.8	2.5	chr8	48749730	48750697	(96387939)	+	MSTD-int	LTR/ERVL-MaLR	637	1735	(0)	3863647
1514	19.9	9.4	3.2	chr8	48750700	48751068	(96387568)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	3863647
846	24.3	5.1	0.4	chr8	50803972	50804215	(94334421)	C	L1MD2	LINE/L1	(1983)	4554	4299	3866010
2104	17.0	0.0	0.6	chr8	50804221	50804563	(94334073)	+	MER61A	LTR/ERV1	1	341	(0)	3866014
24758	12.6	3.1	1.8	chr8	50804564	50809134	(94329502)	+	MER61-int	LTR/ERV1	1	5217	(0)	3866014
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
19	20.0	5.2	5.9	chr8	57258110	57258205	(87880431)	+	(ACCTGC)n	Simple_repeat	1	101	(0)	3875055
3128	10.8	7.4	10.3	chr8	60493462	60494073	(84644563)	+	LTR14B	LTR/ERVK	16	608	(0)	3879250
9378	8.2	0.8	0.1	chr8	60494074	60495276	(84643360)	+	HERVK14-int	LTR/ERVK	1	1211	(4885)	3879250
2322	7.9	0.3	3.1	chr8	63124616	63124932	(82013704)	C	AluSc	SINE/Alu	(1)	308	1	3882761
2369	11.1	7.1	4.3	chr8	63124933	63125251	(82013385)	C	MER48	LTR/ERV1	(69)	338	1	3882760
41249	10.2	3.5	0.7	chr8	65863622	65870079	(79268557)	+	HERVH48-int	LTR/ERV1	1	6647	(7)	3886535
2783	14.3	21.9	2.1	chr8	68513380	68514025	(76624611)	C	MER61-int	LTR/ERV1	(4443)	774	1	3890798
1930	14.2	5.0	0.9	chr8	68514026	68514352	(76624284)	C	MER61A	LTR/ERV1	(0)	341	1	3890798
319	29.7	6.2	6.7	chr8	68514451	68514659	(76623977)	C	L1MEd	LINE/L1	(6875)	228	21	3890793
36386	10.6	4.3	3.4	chr8	68889173	68895123	(76243513)	+	HERVK9-int	LTR/ERVK	18	6021	(0)	3891274
3873	6.6	1.6	0.0	chr8	68895128	68895627	(76243009)	+	MER9a3	LTR/ERVK	5	512	(0)	3891274
13020	8.1	0.2	0.0	chr8	70511770	70513344	(74625292)	+	THE1A-int	LTR/ERVL-MaLR	1	1578	(2)	3893958
2571	13.3	0.8	0.3	chr8	70551681	70552042	(74586594)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3894026
304	27.7	14.3	5.1	chr8	70552207	70552509	(74586127)	+	L2c	LINE/L2	3052	3391	(35)	3894027
870	28.3	5.5	1.4	chr8	76953350	76953629	(68185007)	+	MER115	DNA/hAT-Tip100	368	659	(34)	3902857
186	25.0	5.1	3.5	chr8	78516730	78516787	(66621849)	+	OldhAT1	DNA/hAT-Ac	2483	2541	(307)	3904792
2322	11.1	0.3	0.0	chr8	86482120	86482416	(58656220)	+	AluSx1	SINE/Alu	1	298	(14)	3916156
17	3.6	6.9	0.0	chr8	88327250	88327278	(56811358)	+	(CTCC)n	Simple_repeat	1	31	(0)	3918471
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
14	19.1	0.0	6.4	chr8	97644083	97644129	(47494507)	+	(GCCCC)n	Simple_repeat	1	47	(0)	3932076
271	30.4	8.0	3.4	chr8	100847811	100847929	(44290707)	+	L2c	LINE/L2	3254	3378	(9)	3937648
3409	8.9	2.5	0.0	chr8	111931112	111931583	(33207053)	+	LTR3A	LTR/ERVK	1	484	(0)	3954149
1037	16.2	8.3	0.0	chr8	111931584	111931781	(33206855)	+	HERVK3-int	LTR/ERVK	1	216	(6986)	3954149
2014	10.1	14.6	0.3	chr8	111931774	111932102	(33206534)	+	HERVK3-int	LTR/ERVK	586	969	(6233)	3954149
877	28.8	1.5	1.5	chr8	122683127	122683387	(22455249)	+	LTR78	LTR/ERV1	264	524	(780)	3970317
863	30.0	5.2	4.7	chr8	122683590	122684033	(22454603)	+	LTR78	LTR/ERV1	855	1300	(4)	3970317
1305	12.2	16.5	0.5	chr8	140940245	140940458	(4198178)	+	AluSx1	SINE/Alu	38	292	(20)	4002835
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
11	21.7	7.3	1.7	chr8	143707519	143707573	(1431063)	+	(CAGCTC)n	Simple_repeat	1	59	(0)	4006557
180	31.9	2.8	1.4	chr8	144106370	144106439	(1032197)	+	L3b	LINE/CR1	5123	5193	(39)	4007112
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
983	19.0	4.8	0.0	chr8	144233153	144233368	(905268)	C	L1MB3	LINE/L1	(3)	6180	5954	4007362
1068	22.4	3.6	0.7	chr8	144233505	144233801	(904835)	C	L1MB3	LINE/L1	(183)	6000	5695	4007363
212	26.4	11.0	3.7	chr8	144373200	144373333	(765303)	C	L2a	LINE/L2	(372)	3054	2910	4007536
2712	18.0	3.5	2.0	chr9	6384158	6384696	(132010021)	C	MER61-int	LTR/ERV1	(4668)	549	3	4017927
1975	13.5	6.5	1.9	chr9	6384698	6385022	(132009695)	C	MER61A	LTR/ERV1	(0)	341	1	4017927
8574	10.4	10.3	0.0	chr9	6385023	6385264	(132009453)	+	L1MA3	LINE/L1	3353	3625	(3940)	4017929
16	0.0	0.0	0.0	chr9	6990549	6990565	(131404152)	+	(T)n	Simple_repeat	1	17	(0)	4019089
1932	11.4	1.7	7.0	chr9	17377269	17377583	(121017134)	+	AluSx	SINE/Alu	6	303	(9)	4033251
1627	27.2	6.8	6.9	chr9	17377584	17378180	(121016537)	C	HAL1b	LINE/L1	(764)	1657	1036	4033249
48	7.5	2.1	4.2	chr9	17622926	17622966	(120771751)	+	(CCTTCC)n	Simple_repeat	1	39	(0)	4033587
16	15.9	0.0	0.0	chr9	21696981	21697008	(116697709)	+	(T)n	Simple_repeat	1	28	(0)	4039567
13	18.8	2.6	2.6	chr9	21989989	21990026	(116404691)	+	GA-rich	Low_complexity	1	39	(0)	4039963
2178	13.9	0.6	1.2	chr9	30851131	30851473	(107543244)	+	MER61A	LTR/ERV1	1	341	(0)	4051681
3381	16.7	5.6	2.9	chr9	30851474	30852753	(107541964)	+	MER61-int	LTR/ERV1	1	1917	(3300)	4051681
480	10.3	7.0	3.0	chr9	36763784	36764852	(101629865)	+	(TG)n	Simple_repeat	1	1144	(0)	4061412
29	0.0	0.0	5.4	chr9	36764875	36764911	(101629806)	+	(AGGTGGC)n	Simple_repeat	1	37	(0)	4061413
15	0.0	0.0	0.0	chr9	36798111	36798127	(101596590)	+	(GT)n	Simple_repeat	1	17	(0)	4061483
26	5.8	2.8	0.0	chr9	36798127	36798162	(101596555)	+	(GA)n	Simple_repeat	1	37	(0)	4061484
330	17.9	8.7	2.3	chr9	36798382	36798467	(101596250)	+	MER91B	DNA/hAT-Tip100	49	140	(50)	4061485
1147	26.0	14.9	0.0	chr9	36798480	36798891	(101595826)	+	LTR33	LTR/ERVL	25	508	(7)	4061486
340	22.0	7.8	9.2	chr9	37801620	37801749	(100592968)	+	L2b	LINE/L2	3245	3372	(3)	4063415
471	22.9	8.6	0.0	chr9	38417314	38417457	(99977260)	C	MIRb	SINE/MIR	(50)	218	34	4064565
2575	15.5	10.5	3.3	chr9	38417543	38418063	(99976654)	C	MER68	LTR/ERVL	(0)	563	1	4064566
3278	14.7	3.2	0.5	chr9	41274000	41274606	(97120111)	+	TAR1	Satellite/telo	1445	2068	(43)	4068410
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
18600	10.6	1.7	6.0	chr9	62840284	62843326	(75551391)	C	L1PBa	LINE/L1	(927)	5198	2140	4073706
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
2393	7.7	0.0	2.6	chr9	78235587	78235899	(60158818)	C	AluSq2	SINE/Alu	(8)	305	1	4095457
469	33.9	5.0	4.7	chr9	84848566	84848906	(53545811)	+	MARNA	DNA/TcMar-Mariner	149	490	(96)	4105346
14	20.0	8.8	3.5	chr9	84848961	84849040	(53545677)	+	(ACATATT)n	Simple_repeat	1	87	(0)	4105347
70927	5.1	0.5	0.0	chr9	86148447	86156796	(52237921)	C	HERV9-int	LTR/ERV1	(0)	8436	49	4107408
262	2.9	0.0	0.0	chr9	86156820	86156854	(52237863)	C	LTR12_	LTR/ERV1	(0)	688	654	4107409
1655	10.3	6.5	0.0	chr9	86156857	86157088	(52237629)	+	AluSp	SINE/Alu	54	301	(12)	4107410
28017	2.8	0.2	0.0	chr9	86157089	86163107	(52231610)	+	L1PA2	LINE/L1	125	6153	(2)	4107411
317	30.6	5.5	5.1	chr9	87568123	87568339	(50826378)	C	MER102c	DNA/hAT-Charlie	(50)	281	64	4109704
726	23.1	12.7	1.8	chr9	90639949	90640234	(47754483)	+	MER33	DNA/hAT-Charlie	1	322	(2)	4114121
26744	5.0	0.2	0.2	chr9	90686273	90691756	(47702961)	+	L1PA4	LINE/L1	2	5487	(668)	4114166
5780	15.7	1.5	2.3	chr9	90901445	90902406	(47492311)	+	LTR13_	LTR/ERVK	1	954	(0)	4114436
3418	22.6	2.9	1.8	chr9	90902407	90903227	(47491490)	+	HERVK13-int	LTR/ERVK	1	830	(7286)	4114436
3370	22.0	8.8	2.6	chr9	95683811	95684053	(42710664)	+	L1MA9	LINE/L1	5998	6273	(39)	4121576
278	24.7	6.1	6.1	chr9	95684204	95684302	(42710415)	+	MLT1K	LTR/ERVL-MaLR	469	567	(28)	4121575
898	18.1	9.8	4.5	chr9	96089261	96089549	(42305168)	C	MER33	DNA/hAT-Charlie	(1)	323	18	4122202
191	24.6	8.4	4.4	chr9	96777633	96777700	(41617017)	C	MIRb	SINE/MIR	(186)	82	12	4123477
288	36.3	0.0	0.9	chr9	101487368	101487481	(36907236)	+	MamTip2	DNA/hAT-Tip100	107	219	(86)	4131780
3654	17.3	3.4	6.5	chr9	103131375	103132163	(35262554)	C	MER61-int	LTR/ERV1	(4452)	765	2	4133948
1602	20.1	1.6	1.3	chr9	103132165	103132496	(35262221)	C	MER61B	LTR/ERV1	(0)	427	1	4133948
664	22.7	5.3	1.3	chr9	103132509	103132853	(35261864)	C	L1ME1	LINE/L1	(0)	7785	7606	4133947
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
987	24.9	2.8	0.0	chr9	122858411	122858651	(15536066)	C	MIR	SINE/MIR	(10)	252	5	4169664
1123	24.6	6.2	1.3	chr9	126314789	126315097	(12079620)	C	L2a	LINE/L2	(807)	2612	2288	4176232
7849	6.9	1.2	1.3	chr9	128850236	128851238	(9543479)	+	LTR5B	LTR/ERVK	1	1002	(0)	4181485
16412	19.2	2.9	2.6	chr9	128851239	128856449	(9538268)	+	HERVK-int	LTR/ERVK	1	7534	(2)	4181485
274	31.6	15.2	10.0	chr9	130534550	130534679	(7860038)	+	L2b	LINE/L2	3248	3385	(2)	4185237
343	13.2	1.9	0.0	chr9	130534908	130534970	(7859747)	+	MER57B2	LTR/ERV1	295	374	(58)	4185238
15	20.4	1.5	7.6	chr9	131531183	131531247	(6863470)	+	(CCGCGC)n	Simple_repeat	1	66	(0)	4187226
5215	7.4	5.1	2.9	chr9	132668868	132669498	(5725219)	C	MER4E1	LTR/ERV1	(131)	650	1	4189286
12	18.1	0.0	3.0	chr9	132669623	132669655	(5725062)	+	(CCACT)n	Simple_repeat	1	33	(0)	4189288
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
13	15.8	0.0	7.3	chr9	137551995	137552035	(842682)	+	G-rich	Low_complexity	1	41	(0)	4195770
35	31.4	5.1	2.4	chr9	137668289	137668484	(726233)	+	(TCCA)n	Simple_repeat	1	206	(0)	4195995
2493	14.4	1.2	0.8	chrX	3589505	3589903	(152450992)	C	MER57B1	LTR/ERV1	(0)	401	1	4365142
2304	9.7	0.7	0.0	chrX	13715191	13715480	(142325415)	+	AluSz	SINE/Alu	1	292	(20)	4381647
2468	10.7	3.9	3.1	chrX	18728217	18728573	(137312322)	C	THE1B	LTR/ERVL-MaLR	(0)	364	5	4390068
17097	13.0	1.3	1.7	chrX	24344441	24347020	(131693875)	C	MER57-int	LTR/ERV1	(4968)	2569	1	4399338
1389	20.7	4.4	4.9	chrX	31072234	31072253	(124968642)	C	L1MB4	LINE/L1	(0)	6184	6168	4409241
2308	10.3	0.3	1.3	chrX	31072254	31072553	(124968342)	+	AluSx3	SINE/Alu	1	297	(14)	4409242
4934	17.3	5.8	2.8	chrX	31072554	31074151	(124966744)	C	L1MB4	LINE/L1	(17)	6167	4492	4409241
836	22.1	2.4	4.2	chrX	39238071	39238283	(116802612)	C	L1ME3A	LINE/L1	(0)	6173	5965	4420212
33	5.6	0.0	0.0	chrX	40143213	40143249	(115897646)	+	(TG)n	Simple_repeat	1	37	(0)	4421852
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
2616	22.2	23.3	1.7	chrX	44865278	44865614	(111175281)	C	Cheshire	DNA/hAT-Charlie	(2012)	408	1	4429919
390	33.0	8.5	1.3	chrX	44865830	44866014	(111174881)	+	L2c	LINE/L2	2926	3115	(272)	4429925
2017	7.5	2.9	13.9	chrX	44866015	44866360	(111174535)	C	AluSq2	SINE/Alu	(6)	307	1	4429926
390	33.0	8.5	1.3	chrX	44866361	44866478	(111174417)	+	L2c	LINE/L2	3116	3252	(135)	4429925
212	30.8	6.2	2.1	chrX	49074455	49074547	(106966348)	+	L2b	LINE/L2	3097	3193	(182)	4437423
640	27.2	2.3	2.9	chrX	51563332	51563505	(104477390)	C	MER61-int	LTR/ERV1	(4864)	353	181	4440790
734	10.5	0.9	3.4	chrX	51563535	51563652	(104477243)	C	MER61-int	LTR/ERV1	(5102)	115	1	4440790
1644	17.7	13.6	3.6	chrX	51563661	51564017	(104476878)	C	MER61B	LTR/ERV1	(29)	398	1	4440790
2492	9.9	0.0	1.0	chrX	53863713	53864026	(102176869)	+	AluSq	SINE/Alu	1	311	(2)	4444533
5243	15.8	5.4	3.4	chrX	53864027	53864623	(102176272)	+	L1P4d	LINE/L1	378	964	(5971)	4444532
4444	7.3	1.2	0.2	chrX	57207970	57208543	(98832352)	C	HERVK9-int	LTR/ERVK	(5441)	580	1	4448875
3845	7.5	1.0	0.2	chrX	57208544	57209051	(98831844)	C	MER9a3	LTR/ERVK	(0)	512	1	4448875
12	25.6	2.4	0.0	chrX	71068325	71068366	(84972529)	+	G-rich	Low_complexity	1	43	(0)	4460743
17	5.3	12.5	0.0	chrX	71068423	71068462	(84972433)	+	(GCAC)n	Simple_repeat	1	45	(0)	4460744
3411	21.8	1.8	0.1	chrX	86981219	86981875	(69059020)	C	MSTB-int	LTR/ERVL-MaLR	(576)	1075	408	4478651
9399	11.7	0.3	3.3	chrX	107588554	107589439	(48451456)	C	L1PA8A	LINE/L1	(4500)	1983	1113	4504429
1487	14.1	1.7	0.4	chrX	107589439	107589666	(48451229)	C	L1PA8A	LINE/L1	(5639)	236	6	4504429
4951	26.4	4.4	5.5	chrX	109573835	109575354	(46465541)	+	MSTA1-int	LTR/ERVL-MaLR	1	1497	(154)	4507023
230	37.0	3.8	4.5	chrX	109914884	109915016	(46125879)	C	L2b	LINE/L2	(0)	3375	3244	4507550
2758	4.4	0.0	0.0	chrX	109915401	109915697	(46125198)	+	AluY	SINE/Alu	1	297	(14)	4507551
2488	18.6	4.6	2.3	chrX	119593638	119593686	(36447209)	+	L1MC5a	LINE/L1	1943	1993	(784)	4521378
2554	15.9	6.2	5.5	chrX	119593687	119594052	(36446843)	+	L1MD	LINE/L1	4817	5167	(979)	4521380
15	29.7	3.7	0.0	chrX	120245553	120245606	(35795289)	+	(TA)n	Simple_repeat	1	56	(0)	4522642
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
299	21.6	6.2	3.1	chrX	154323559	154323677	(1717218)	C	LTR67B	LTR/ERVL	(0)	620	429	4571699
397	26.5	1.0	0.0	chrX	154323846	154323943	(1716952)	C	LTR67B	LTR/ERVL	(451)	169	71	4571699
2158	9.0	0.0	5.3	chrX	154491121	154491441	(1549454)	C	AluSg4	SINE/Alu	(5)	305	2	4571928
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
700	29.4	6.1	1.2	chrY	11201649	11201899	(46025516)	+	MLT1H1	LTR/ERVL-MaLR	1	264	(291)	4588973
384	26.6	8.9	2.8	chrY	11201978	11202155	(46025260)	+	MLT1H1	LTR/ERVL-MaLR	401	590	(1)	4588973
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
249	31.4	10.8	10.1	chrY	11287602	11287738	(45939677)	C	LTR48	LTR/ERV1	(13)	631	502	4589062
27	0.0	3.3	0.0	chrY	11287739	11287768	(45939647)	+	(AAAAC)n	Simple_repeat	1	31	(0)	4589063
307	25.3	11.2	7.7	chrY	11287769	11288013	(45939402)	C	LTR48	LTR/ERV1	(143)	501	189	4589062