13	15.9	2.7	2.6	chr1	1033359	1033395	(247923027)	+	(GCACAC)n	Simple_repeat	1	38	(0)	1304
104	20.7	5.1	3.2	chr1	1033499	1033852	(247922570)	+	(CCAGCC)n	Simple_repeat	1	372	(0)	1305
12	31.5	0.0	0.0	chr1	1349764	1349810	(247606612)	+	G-rich	Low_complexity	1	47	(0)	1607
24	23.2	0.0	1.6	chr1	1399243	1399304	(247557118)	+	(CGC)n	Simple_repeat	1	62	(0)	1683
218	16.1	6.7	1.8	chr1	1400943	1400999	(247555423)	+	L3	LINE/CR1	3123	3182	(917)	1684
372	23.5	7.5	0.7	chr1	1422514	1422650	(247533772)	C	LTR75	LTR/ERVL	(294)	268	122	1721
3836	13.6	5.4	0.8	chr1	1422773	1423374	(247533048)	+	MER41B	LTR/ERV1	4	634	(0)	1722
15	20.2	10.0	3.0	chr1	1435466	1435555	(247520867)	+	(GTGC)n	Simple_repeat	1	99	(0)	1739
16	12.8	2.9	0.0	chr1	1435597	1435630	(247520792)	+	G-rich	Low_complexity	1	35	(0)	1740
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
1729	17.7	2.1	0.0	chr1	1849419	1849700	(247106722)	C	AluJb	SINE/Alu	(24)	288	1	2464
827	23.1	7.8	2.6	chr1	1849701	1849962	(247106460)	C	L1MEg	LINE/L1	(4843)	2194	1898	2463
23	19.9	0.0	0.0	chr1	1919184	1919235	(247037187)	+	(GCAGCA)n	Simple_repeat	1	52	(0)	2617
18	17.9	3.7	3.6	chr1	2546378	2546431	(246409991)	+	(CGC)n	Simple_repeat	1	56	(0)	3308
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
212	32.4	7.5	0.9	chr1	6204853	6204964	(242751458)	C	L2b	LINE/L2	(15)	3360	3241	7830
16	12.4	5.7	0.0	chr1	6466068	6466102	(242490320)	+	(CCG)n	Simple_repeat	1	37	(0)	8274
205	29.7	1.3	6.3	chr1	8856957	8857035	(240099387)	C	MIR	SINE/MIR	(108)	154	80	12407
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
2093	14.5	0.7	0.3	chr1	9009454	9009757	(239946665)	C	AluJb	SINE/Alu	(7)	305	1	12743
12	13.6	0.0	7.9	chr1	9910656	9910693	(239045729)	+	(GGCGGA)n	Simple_repeat	1	38	(0)	14608
2270	10.5	0.3	0.0	chr1	11493443	11493736	(237462686)	+	AluSz	SINE/Alu	1	295	(17)	17820
3089	14.5	5.9	2.8	chr1	11493737	11493848	(237462574)	C	MLT2B4	LTR/ERVL	(451)	105	1	17819
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
1794	17.8	22.5	2.1	chr1	14339403	14339839	(234616583)	C	MLT2B4	LTR/ERVL	(4)	552	1	23010
494	28.2	9.8	1.0	chr1	15112095	15112298	(233844124)	+	MIRb	SINE/MIR	26	249	(19)	24565
53	0.0	0.0	0.0	chr1	15112330	15112374	(233844048)	+	(TG)n	Simple_repeat	1	45	(0)	24566
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
12	15.8	2.6	5.0	chr1	16440347	16440385	(232516037)	+	(AGGCAG)n	Simple_repeat	1	40	(0)	27498
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
16	7.0	3.1	3.0	chr1	16613537	16613568	(232342854)	+	(CCTGCG)n	Simple_repeat	1	33	(0)	27820
2358	10.0	0.0	0.0	chr1	16620824	16621124	(232335298)	C	AluSc8	SINE/Alu	(10)	301	1	27833
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
13	23.0	5.0	3.2	chr1	16960884	16960943	(231995479)	+	(CTGGAG)n	Simple_repeat	1	63	(0)	28363
13	22.6	5.0	3.2	chr1	16961028	16961087	(231995335)	+	(GGCCTC)n	Simple_repeat	1	63	(0)	28364
2389	18.8	6.9	6.1	chr1	17665704	17666247	(231290175)	C	MLT2B4	LTR/ERVL	(4)	552	4	29956
32	20.1	6.7	2.4	chr1	19485680	19485798	(229470624)	+	(GCGGC)n	Simple_repeat	1	127	(0)	33725
21	19.6	0.0	0.0	chr1	19485986	19486032	(229470390)	+	(GCCCA)n	Simple_repeat	1	47	(0)	33726
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
180	35.2	3.6	5.3	chr1	22045600	22045713	(226910709)	C	L2b	LINE/L2	(304)	3083	2972	39296
2390	14.8	11.4	3.5	chr1	22045729	22046210	(226910212)	+	MLT2B4	LTR/ERVL	163	687	(31)	39298
325	27.5	14.5	3.9	chr1	22416416	22416593	(226539829)	C	MIRc	SINE/MIR	(45)	223	24	40125
247	28.0	3.9	0.0	chr1	23555538	23555612	(225400810)	C	MIRb	SINE/MIR	(57)	211	134	42732
294	29.5	6.2	11.4	chr1	23555708	23555948	(225400474)	+	MIRb	SINE/MIR	2	232	(36)	42733
228	14.6	2.4	0.0	chr1	23556221	23556261	(225400161)	C	MIR1_Amn	SINE/MIR	(105)	125	84	42734
382	30.4	0.0	0.9	chr1	23556439	23556551	(225399871)	C	MIRb	SINE/MIR	(122)	146	35	42732
195	36.1	0.9	0.0	chr1	23557087	23557194	(225399228)	+	MIR1_Amn	SINE/MIR	57	165	(65)	42736
320	20.0	12.5	0.0	chr1	23693108	23693177	(225263245)	+	AluJr	SINE/Alu	207	286	(26)	43117
371	26.0	17.6	2.0	chr1	23693186	23693338	(225263084)	+	MIR	SINE/MIR	40	221	(41)	43118
1171	17.1	1.0	4.3	chr1	23699410	23699620	(225256802)	C	AluJb	SINE/Alu	(21)	291	88	43128
12	11.3	6.9	0.0	chr1	23778451	23778479	(225177943)	+	(GAGGC)n	Simple_repeat	1	31	(0)	43346
586	24.9	8.6	1.5	chr1	24150941	24151144	(224805278)	C	MER34B	LTR/ERV1	(1)	564	345	44239
24	17.9	1.4	5.6	chr1	24745451	24745520	(224210902)	+	(CAG)n	Simple_repeat	1	71	(0)	45644
241	32.0	10.3	0.0	chr1	26035535	26035656	(222920766)	+	L2c	LINE/L2	3030	3165	(222)	48399
280	28.1	6.3	1.1	chr1	26358818	26358907	(222597515)	C	MIR3	SINE/MIR	(88)	120	26	49145
717	28.7	6.0	0.0	chr1	26358921	26359122	(222597300)	+	MIR	SINE/MIR	18	232	(30)	49146
807	13.6	2.3	0.0	chr1	26470317	26470441	(222485981)	C	AluSx	SINE/Alu	(179)	133	6	49427
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
219	30.0	1.2	3.6	chr1	26787534	26787616	(222168806)	C	L2b	LINE/L2	(19)	3356	3276	50166
24	18.7	5.3	2.5	chr1	26826609	26826684	(222129738)	+	(GGC)n	Simple_repeat	1	80	(0)	50248
13	14.4	3.0	2.9	chr1	26826706	26826738	(222129684)	+	(CGC)n	Simple_repeat	1	34	(0)	50249
18	19.9	0.0	0.0	chr1	26993890	26993930	(221962492)	+	(CCCCGA)n	Simple_repeat	1	41	(0)	50664
660	22.6	6.1	0.1	chr1	27007201	27007388	(221949034)	C	MIR	SINE/MIR	(0)	268	49	50679
2282	9.0	2.0	0.0	chr1	27007393	27007681	(221948741)	C	AluSg4	SINE/Alu	(13)	297	3	50680
12	11.3	6.9	0.0	chr1	27012628	27012656	(221943766)	+	(CCGCT)n	Simple_repeat	1	31	(0)	50691
12	13.2	5.7	2.7	chr1	27102632	27102666	(221853756)	+	(TGCC)n	Simple_repeat	1	37	(0)	50925
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
1954	11.4	4.5	0.0	chr1	28506188	28506484	(220449938)	C	AluSx	SINE/Alu	(1)	311	1	54374
1953	8.2	3.7	4.6	chr1	28507601	28507904	(220448518)	C	AluSg	SINE/Alu	(8)	302	2	54378
284	25.2	2.9	4.7	chr1	28507976	28508082	(220448340)	+	FRAM	SINE/Alu	48	152	(24)	54379
1580	4.5	1.0	0.0	chr1	28508558	28508759	(220447663)	+	U17	snRNA	1	204	(3)	54380
1645	9.9	1.3	0.0	chr1	28509306	28509538	(220446884)	C	AluSx3	SINE/Alu	(75)	236	1	54382
1722	8.1	2.3	3.1	chr1	28511977	28512235	(220444187)	C	AluSx1	SINE/Alu	(10)	302	46	54388
982	21.4	6.0	0.1	chr1	28512481	28512806	(220443616)	C	L1MEc	LINE/L1	(2974)	3345	2996	54389
1811	9.8	6.4	0.0	chr1	28512808	28513072	(220443350)	C	AluYc	SINE/Alu	(16)	283	1	54390
272	12.3	0.0	13.8	chr1	28513166	28513203	(220443219)	C	AluJo	SINE/Alu	(141)	171	135	54392
1693	15.5	4.0	0.7	chr1	28513204	28513494	(220442928)	C	AluSx	SINE/Alu	(11)	301	1	54393
2238	8.8	0.3	0.0	chr1	28514480	28514776	(220441646)	+	AluSp	SINE/Alu	1	298	(15)	54397
1972	8.8	0.0	0.4	chr1	28515900	28516162	(220440260)	+	AluSq2	SINE/Alu	1	262	(51)	54403
544	5.9	0.0	0.0	chr1	28516163	28516230	(220440192)	+	AluSx	SINE/Alu	69	136	(176)	54404
2102	8.4	3.4	0.3	chr1	28516232	28516518	(220439904)	+	AluSg7	SINE/Alu	1	296	(13)	54405
13	8.9	0.0	3.9	chr1	28914599	28914624	(220041798)	+	(TCGC)n	Simple_repeat	1	26	(0)	55498
19	20.8	0.0	6.3	chr1	29181798	29181860	(219774562)	+	(GGC)n	Simple_repeat	1	63	(0)	56088
203	31.5	10.5	0.0	chr1	31155650	31155760	(217800662)	+	MIRc	SINE/MIR	93	216	(52)	59977
2247	11.9	0.0	2.0	chr1	32067122	32067424	(216888998)	+	AluSg	SINE/Alu	1	297	(13)	61984
2024	7.8	0.0	15.4	chr1	32067432	32067569	(216888853)	+	AluSp	SINE/Alu	1	86	(227)	61985
14	19.1	0.0	2.6	chr1	32248485	32248522	(216707900)	+	(GAGCCG)n	Simple_repeat	1	38	(0)	62400
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
24	25.4	3.8	0.0	chr1	32964720	32964798	(215991624)	+	(CGC)n	Simple_repeat	1	82	(0)	64114
1638	27.2	3.2	1.3	chr1	33050501	33050962	(215905460)	C	MLT1J	LTR/ERVL-MaLR	(7)	505	35	64338
889	7.3	0.0	0.9	chr1	35175284	35175393	(213781029)	+	AluSx	SINE/Alu	1	109	(203)	68185
333	16.7	5.6	5.6	chr1	35175395	35175466	(213780956)	+	AluSg4	SINE/Alu	215	286	(24)	68186
12	27.6	0.0	0.0	chr1	35192280	35192318	(213764104)	+	(TGG)n	Simple_repeat	1	39	(0)	68202
39	32.2	0.0	0.0	chr1	35192740	35192869	(213763553)	+	(GCG)n	Simple_repeat	1	130	(0)	68203
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
26	26.9	5.3	0.8	chr1	35808056	35808168	(213148254)	+	(CCCGCG)n	Simple_repeat	1	119	(0)	69521
12	20.1	1.9	7.4	chr1	36178832	36178884	(212777538)	+	(GGCG)n	Simple_repeat	1	54	(0)	70292
4046	16.8	7.4	3.3	chr1	36532071	36532895	(212423527)	+	MER21B	LTR/ERVL	3	864	(4)	71085
2068	16.7	8.8	5.3	chr1	36532896	36533042	(212423380)	C	MLT2B4	LTR/ERVL	(425)	293	163	71082
11	14.9	4.9	4.7	chr1	37764624	37764664	(211191758)	+	(CTCCAC)n	Simple_repeat	1	43	(0)	73397
15	19.9	0.0	0.0	chr1	39901704	39901738	(209054684)	+	G-rich	Low_complexity	1	35	(0)	77652
12	18.0	2.0	7.7	chr1	42456513	42456563	(206499859)	+	(GGCGC)n	Simple_repeat	1	52	(0)	82545
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
12	27.1	2.3	0.0	chr1	43974948	43974991	(204981431)	+	(GGAC)n	Simple_repeat	1	45	(0)	85234
13	13.5	0.0	7.9	chr1	43975003	43975040	(204981382)	+	(CCG)n	Simple_repeat	1	38	(0)	85235
17	24.9	3.5	0.0	chr1	44030752	44030808	(204925614)	+	(GGCA)n	Simple_repeat	1	59	(0)	85305
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
842	11.3	3.6	0.0	chr1	44780775	44780907	(204175515)	C	AluSx	SINE/Alu	(173)	139	2	86695
12	13.7	0.0	0.0	chr1	44800696	44800719	(204155703)	+	(GGT)n	Simple_repeat	1	24	(0)	86741
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
322	17.9	5.6	0.0	chr1	45586168	45586234	(203370188)	C	AluJb	SINE/Alu	(20)	282	212	88347
91	0.0	2.4	0.0	chr1	45586240	45586323	(203370099)	+	(GT)n	Simple_repeat	1	86	(0)	88348
1588	16.3	0.0	1.1	chr1	45586324	45586587	(203369835)	C	AluJb	SINE/Alu	(50)	262	2	88349
15	10.4	0.0	5.7	chr1	46302681	46302715	(202653707)	+	(CCTGG)n	Simple_repeat	1	35	(0)	89753
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
13	15.2	2.5	4.9	chr1	52365969	52366008	(196590414)	+	(CCGCG)n	Simple_repeat	1	41	(0)	100699
859	28.7	10.0	4.4	chr1	52697872	52697999	(196258423)	+	L2a	LINE/L2	3247	3371	(55)	101487
226	20.0	0.0	0.0	chr1	53220412	53220456	(195735966)	+	L1M1	LINE/L1	1015	1059	(6506)	102673
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
2512	5.2	0.0	0.0	chr1	62211684	62211972	(186744450)	+	AluY	SINE/Alu	1	289	(22)	119749
2009	12.8	0.7	0.7	chr1	62212503	62212792	(186743630)	+	AluSc	SINE/Alu	2	291	(18)	119751
2048	12.6	0.3	1.4	chr1	62212938	62213230	(186743192)	+	AluSx1	SINE/Alu	1	290	(22)	119752
1968	12.3	0.7	2.4	chr1	62213719	62214011	(186742411)	C	AluJb	SINE/Alu	(21)	291	4	119754
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
12	22.5	2.7	0.0	chr1	63322195	63322231	(185634191)	+	G-rich	Low_complexity	1	38	(0)	121838
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
2573	18.1	3.1	3.9	chr1	63891498	63892010	(185064412)	+	MLT2B2	LTR/ERVL	1	509	(6)	122897
11	18.1	2.4	4.8	chr1	65067257	65067297	(183889125)	+	(GCCCCCG)n	Simple_repeat	1	42	(0)	125016
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
1588	14.8	7.1	0.8	chr1	70253343	70253605	(178702817)	+	AluJo	SINE/Alu	1	281	(31)	133077
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
283	25.7	6.6	1.7	chr1	75792730	75792844	(173163578)	C	MER58B	DNA/hAT-Charlie	(74)	267	147	140461
2031	9.8	5.4	0.0	chr1	75792848	75793111	(173163311)	C	AluSx4	SINE/Alu	(31)	279	1	140462
1313	22.1	4.8	3.1	chr1	75795702	75795990	(173160432)	C	AluJo	SINE/Alu	(18)	294	1	140466
240	22.7	7.4	0.0	chr1	79381094	79381168	(169575254)	C	HAL1ME	LINE/L1	(351)	2114	2034	145811
2076	23.0	8.3	0.6	chr1	79381180	79381687	(169574735)	+	MLT2B4	LTR/ERVL	2	552	(4)	145812
1812	20.6	4.9	1.5	chr1	80797471	80797864	(168158558)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	147606
2206	22.9	4.2	2.4	chr1	80797865	80797971	(168158451)	C	MLT2B2	LTR/ERVL	(406)	109	3	147605
387	31.0	0.6	8.2	chr1	80797980	80798162	(168158260)	C	L1MCc	LINE/L1	(5607)	816	648	147603
2397	17.5	3.1	11.3	chr1	84097466	84098033	(164858389)	C	MLT2B1	LTR/ERVL	(0)	520	1	152061
2567	23.7	6.9	5.9	chr1	84098034	84098473	(164857949)	C	L1ME3	LINE/L1	(703)	5459	5004	152060
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
16	8.6	7.5	2.3	chr1	98048583	98048622	(150907800)	+	(CCTCCAC)n	Simple_repeat	1	43	(0)	172871
322	32.6	0.0	0.0	chr1	100351338	100351432	(148604990)	+	MamSINE1	SINE/tRNA-RTE	195	289	(1)	176446
34	5.2	0.0	0.0	chr1	108560105	108560144	(140396278)	+	(GGC)n	Simple_repeat	1	40	(0)	186918
2295	11.4	0.0	0.0	chr1	108703239	108703544	(140252878)	+	AluSg	SINE/Alu	1	306	(4)	187174
1874	12.8	0.0	2.1	chr1	108703545	108703699	(140252723)	+	AluSx	SINE/Alu	135	287	(25)	187173
13	18.3	4.3	4.1	chr1	109397924	109397970	(139558452)	+	(CCGC)n	Simple_repeat	1	49	(0)	188516
387	29.1	5.3	4.3	chr1	110338041	110338320	(138618102)	+	Charlie16a	DNA/hAT-Charlie	44	326	(16)	189971
2490	14.6	9.7	8.8	chr1	110515223	110515770	(138440652)	+	MLT2B4	LTR/ERVL	1	554	(2)	190296
15	5.6	0.0	0.0	chr1	112905801	112905819	(136050603)	+	(T)n	Simple_repeat	1	19	(0)	194026
12	26.5	0.0	4.1	chr1	116152164	116152212	(132804210)	+	(GCGCG)n	Simple_repeat	1	49	(0)	199232
14	19.8	2.4	2.3	chr1	119711884	119711925	(129244497)	+	GA-rich	Low_complexity	1	43	(0)	204433
215	26.8	16.4	5.9	chr1	119744495	119744613	(129211809)	C	L2b	LINE/L2	(8)	3367	3234	204475
591	22.0	3.6	3.0	chr1	120354987	120355150	(128601272)	+	U1	snRNA	1	165	(0)	205414
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
631	21.4	3.6	3.0	chr1	144523858	144524021	(104432401)	C	U1	snRNA	(0)	165	1	209540
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1490	0.6	0.0	0.0	chr1	144560666	144560829	(104395593)	C	U1	snRNA	(1)	164	1	209628
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1098	14.1	1.2	0.0	chr1	148402715	148402877	(100553545)	+	U1	snRNA	1	165	(0)	215662
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
20	9.8	0.0	0.0	chr1	149888245	149888277	(99068145)	+	(TTTTG)n	Simple_repeat	1	33	(0)	217934
1012	8.8	0.0	3.6	chr1	150537904	150538040	(98418382)	+	AluSx3	SINE/Alu	174	305	(6)	219293
210	35.4	7.6	6.0	chr1	150570060	150570227	(98386195)	+	L2b	LINE/L2	3101	3271	(104)	219349
1911	18.6	0.0	0.3	chr1	150570238	150570533	(98385889)	C	AluJb	SINE/Alu	(16)	296	2	219350
1875	10.0	9.7	0.0	chr1	150571867	150572127	(98384295)	C	AluSx1	SINE/Alu	(13)	299	11	219354
2039	12.7	0.0	3.7	chr1	150572142	150572440	(98383982)	C	AluSx3	SINE/Alu	(18)	293	6	219355
1476	6.7	0.0	0.0	chr1	150634650	150634829	(98321593)	+	HERVK-int	LTR/ERVK	7262	7441	(95)	219502
225	22.1	2.5	17.2	chr1	150634830	150634922	(98321500)	+	SVA_E	Retroposon/SVA	853	931	(451)	219503
6775	10.1	1.6	0.9	chr1	150634924	150635885	(98320537)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	219504
289	31.7	5.7	7.0	chr1	153797349	153797505	(95158917)	+	CR1_Mam	LINE/CR1	1145	1302	(902)	224781
2289	6.5	0.0	0.0	chr1	153797506	153797796	(95158626)	C	AluSc	SINE/Alu	(18)	291	1	224782
12	17.5	3.1	0.0	chr1	153958498	153958529	(94997893)	+	(CTCC)n	Simple_repeat	1	33	(0)	225133
16	24.8	0.0	3.6	chr1	153958537	153958592	(94997830)	+	(GCCGCC)n	Simple_repeat	1	56	(0)	225134
12	12.6	0.0	3.6	chr1	155250854	155250881	(93705541)	+	(GCCTG)n	Simple_repeat	1	28	(0)	227620
18	26.1	0.0	4.6	chr1	156282735	156282799	(92673623)	+	(CCG)n	Simple_repeat	1	65	(0)	229845
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
252	32.8	5.8	0.9	chr1	156668190	156668303	(92288119)	C	MIR3	SINE/MIR	(27)	181	62	230543
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
23	21.7	2.5	3.7	chr1	160262403	160262482	(88693940)	+	(CCACCG)n	Simple_repeat	1	82	(0)	235489
29	0.0	0.0	0.0	chr1	162069751	162069777	(86886645)	+	(CCGCCA)n	Simple_repeat	1	27	(0)	238552
13	19.8	0.0	2.7	chr1	162561644	162561680	(86394742)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	239384
33	0.0	2.6	2.5	chr1	165698032	165698070	(83258352)	+	(AAAC)n	Simple_repeat	1	40	(0)	244108
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
23	19.6	2.6	5.1	chr1	167221216	167221292	(81735130)	+	(CCG)n	Simple_repeat	1	79	(0)	246373
24	24.0	2.4	3.5	chr1	168136745	168136828	(80819594)	+	(GCC)n	Simple_repeat	1	86	(0)	247859
2705	17.1	4.2	2.1	chr1	168213127	168213611	(80742811)	C	MLT2B4	LTR/ERVL	(60)	496	1	248015
908	23.1	6.3	0.0	chr1	168213612	168213849	(80742573)	+	L1ME1	LINE/L1	5925	6178	(1)	248016
2439	23.1	5.0	4.4	chr1	170265292	170266093	(78690329)	C	THE1C-int	LTR/ERVL-MaLR	(772)	808	2	251088
21390	12.7	1.3	1.2	chr1	171029482	171033743	(77922679)	C	L1PA8A	LINE/L1	(2184)	4277	1	252100
17	29.0	0.0	1.7	chr1	172533154	172533213	(76423209)	+	(GGC)n	Simple_repeat	1	60	(0)	254353
22426	12.9	2.0	0.8	chr1	173627204	173630567	(75325855)	+	L1M1	LINE/L1	17	3398	(4167)	255870
4647	14.5	7.2	3.8	chr1	173859947	173860878	(75095544)	C	Charlie1a	DNA/hAT-Charlie	(197)	1258	297	256227
1837	15.5	0.3	4.1	chr1	173860930	173861219	(75095203)	C	AluJr	SINE/Alu	(22)	290	12	256229
1561	16.6	0.0	2.5	chr1	173861613	173861847	(75094575)	+	AluSz6	SINE/Alu	1	229	(83)	256231
971	10.4	15.0	1.4	chr1	173861848	173861991	(75094431)	C	AluSz6	SINE/Alu	(68)	244	78	256232
2252	11.2	1.7	0.3	chr1	173862266	173862550	(75093872)	C	AluSg	SINE/Alu	(21)	289	1	256233
1757	13.4	2.4	0.4	chr1	173862551	173862796	(75093626)	C	AluSx1	SINE/Alu	(16)	296	46	256234
67	0.0	5.6	0.0	chr1	175030000	175030070	(73926352)	+	(AC)n	Simple_repeat	1	75	(0)	258118
14	27.6	0.0	5.9	chr1	179229448	179229515	(69726907)	+	(CCTGGC)n	Simple_repeat	1	68	(0)	264399
32	3.0	0.0	0.0	chr1	179229633	179229666	(69726756)	+	(CGC)n	Simple_repeat	1	34	(0)	264400
14	9.6	0.0	0.0	chr1	179882205	179882227	(69074195)	+	(TCC)n	Simple_repeat	1	23	(0)	265466
3794	13.7	3.3	2.0	chr1	180512058	180512691	(68443731)	C	LTR9B	LTR/ERV1	(0)	644	3	266484
9322	14.2	1.8	0.5	chr1	181947964	181949471	(67006951)	+	THE1C-int	LTR/ERVL-MaLR	97	1625	(6)	268654
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
310	30.6	0.0	1.2	chr1	182838895	182838980	(66117442)	C	MIRb	SINE/MIR	(19)	249	165	270132
56	30.0	0.0	0.0	chr1	185156495	185156656	(63799766)	+	G-rich	Low_complexity	1	162	(0)	273834
13	18.3	0.0	3.0	chr1	185734404	185734436	(63221986)	+	(GGC)n	Simple_repeat	1	33	(0)	274707
13	16.5	0.0	0.0	chr1	201829212	201829238	(47127184)	+	(GGC)n	Simple_repeat	1	27	(0)	296704
2096	11.2	0.0	1.1	chr1	204077794	204078114	(44878308)	C	AluSz	SINE/Alu	(0)	312	1	300940
550	28.1	2.3	2.3	chr1	204446261	204446435	(44509987)	+	MER5B	DNA/hAT-Charlie	1	175	(3)	301549
2124	7.6	7.1	0.3	chr1	204515678	204515965	(44440457)	C	AluSq2	SINE/Alu	(2)	311	3	301691
380	27.2	6.5	11.4	chr1	204515966	204516016	(44440406)	C	L3	LINE/CR1	(391)	3708	3665	301689
240	23.6	3.3	9.2	chr1	205335929	205336026	(43620396)	+	L2c	LINE/L2	3101	3192	(195)	303244
2254	10.6	0.3	0.0	chr1	205746014	205746306	(43210116)	+	AluSq2	SINE/Alu	1	294	(19)	304031
12	15.8	0.0	3.3	chr1	206507456	206507485	(42448937)	+	(CCGCC)n	Simple_repeat	1	30	(0)	305208
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
1625	16.2	5.6	4.6	chr1	212556745	212557144	(36399278)	+	MLT2B4	LTR/ERVL	1	373	(41)	314752
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
12745	12.3	3.2	2.8	chr1	212891625	212893053	(36063369)	+	Tigger1	DNA/TcMar-Tigger	374	1805	(613)	315394
410	27.5	15.6	0.6	chr1	212909018	212909196	(36047226)	+	MIRb	SINE/MIR	57	267	(1)	315417
2282	8.5	0.7	2.9	chr1	212909296	212909601	(36046821)	C	AluSg	SINE/Alu	(11)	299	1	315418
3404	6.0	0.0	0.7	chr1	212910008	212910445	(36045977)	+	LTR7	LTR/ERV1	1	435	(15)	315419
16898	8.8	2.7	1.6	chr1	212910475	212912921	(36043501)	+	HERVH-int	LTR/ERV1	521	2995	(4718)	315420
1358	13.4	1.8	4.0	chr1	212913597	212913821	(36042601)	+	HERVH-int	LTR/ERV1	5600	5819	(1894)	315420
2550	8.3	4.3	1.3	chr1	212913820	212914199	(36042223)	+	HERVH-int	LTR/ERV1	7322	7713	(0)	315420
196	35.5	4.5	0.0	chr1	218585964	218586070	(30370352)	C	MamRTE1	LINE/RTE-BovB	(170)	3642	3531	323497
2797	16.9	5.6	0.0	chr1	220831188	220831673	(28124749)	C	MLT2B2	LTR/ERVL	(0)	515	1	326806
485	28.1	4.3	7.9	chr1	220831674	220831787	(28124635)	C	MER102b	DNA/hAT-Charlie	(111)	230	120	326805
2012	12.8	0.0	0.7	chr1	223012151	223012439	(25943983)	+	AluSx	SINE/Alu	5	291	(21)	330039
373	35.6	3.3	1.7	chr1	223014645	223014821	(25941601)	+	MLT1N2	LTR/ERVL-MaLR	1	180	(382)	330046
3492	5.6	0.0	1.5	chr1	223029702	223030156	(25926266)	C	LTR7	LTR/ERV1	(2)	448	1	330067
1222	7.7	1.3	0.0	chr1	223030157	223030312	(25926110)	C	MER4A1	LTR/ERV1	(314)	158	1	330066
1413	19.8	9.1	3.5	chr1	223030313	223030906	(25925516)	C	LTR8A	LTR/ERV1	(55)	672	1	330065
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
20	17.0	0.0	6.7	chr1	226870544	226870603	(22085819)	+	G-rich	Low_complexity	1	60	(0)	336618
16	16.4	5.0	4.8	chr1	226870678	226870737	(22085685)	+	(GGCCTGG)n	Simple_repeat	1	63	(0)	336619
926	21.0	6.8	1.4	chr1	227622711	227622932	(21333490)	C	MER21B	LTR/ERVL	(631)	237	3	337716
20	16.4	0.0	0.0	chr1	228103264	228103304	(20853118)	+	(GCAACCC)n	Simple_repeat	1	41	(0)	338293
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
891	11.2	1.6	0.0	chr1	230026253	230026377	(18930045)	+	MLT2B1	LTR/ERVL	1	127	(393)	341304
3942	15.1	5.8	0.5	chr1	230026378	230027050	(18929372)	+	MER50	LTR/ERV1	1	711	(23)	341305
2277	16.7	14.1	0.9	chr1	230592615	230593062	(18363360)	C	MLT2B1	LTR/ERVL	(0)	520	4	342126
851	13.8	1.5	0.0	chr1	231316148	231316277	(17640145)	+	FLAM_C	SINE/Alu	4	135	(8)	343282
2533	20.5	6.4	2.5	chr1	232139247	232139857	(16816565)	C	LTR9B	LTR/ERV1	(0)	644	8	344558
2184	16.6	0.5	7.6	chr1	232140828	232141111	(16815311)	+	L1MB3	LINE/L1	5742	6019	(164)	344559
1894	11.2	0.7	1.8	chr1	232141112	232141389	(16815033)	+	AluSq2	SINE/Alu	39	313	(0)	344560
2277	17.9	11.2	1.8	chr1	232143349	232143839	(16812583)	C	MER67A	LTR/ERV1	(0)	543	1	344563
402	30.3	0.0	0.0	chr1	232145969	232146090	(16810332)	+	UCON17	Unknown	152	273	(165)	344567
21	17.3	0.0	2.4	chr1	233613655	233613696	(15342726)	+	(CA)n	Simple_repeat	1	42	(0)	346666
17	18.1	0.0	7.0	chr1	233904579	233904635	(15051787)	+	G-rich	Low_complexity	1	57	(0)	347067
12	11.6	3.3	3.2	chr1	233904670	233904699	(15051723)	+	(CGACC)n	Simple_repeat	1	31	(0)	347068
2335	9.8	0.0	0.3	chr1	234111286	234111590	(14844832)	C	AluSq2	SINE/Alu	(7)	306	3	347371
2077	10.2	0.0	0.7	chr1	238516575	238516848	(10439574)	+	AluY	SINE/Alu	38	309	(2)	354807
3963	20.2	3.3	2.6	chr1	238516849	238517006	(10439416)	+	LTR8B	LTR/ERV1	649	812	(8)	354806
504	17.4	4.3	1.1	chr1	239034298	239034418	(9922004)	C	MLT2D	LTR/ERVL	(52)	508	433	355525
2583	18.5	4.5	0.2	chr1	239034419	239034883	(9921539)	+	MLT2B1	LTR/ERVL	1	486	(34)	355527
2013	21.8	4.6	4.8	chr1	241450531	241450790	(7505632)	C	MLT2B1	LTR/ERVL	(258)	262	1	359303
23542	16.2	2.0	2.4	chr1	241450793	241455070	(7501352)	C	ERVL-B4-int	LTR/ERVL	(2)	5712	1452	359303
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
3686	19.7	3.3	1.6	chr1	242571734	242572154	(6384268)	C	L1MC2	LINE/L1	(0)	6344	5907	361189
1926	17.4	15.3	6.4	chr1	242572155	242572657	(6383765)	+	MLT2B4	LTR/ERVL	1	556	(0)	361190
3713	13.5	10.8	1.7	chr1	242585627	242586635	(6369787)	+	MER51-int	LTR/ERV1	1	1101	(6715)	361207
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
15	23.9	4.1	0.0	chr1	244048208	244048256	(4908166)	+	(CGC)n	Simple_repeat	1	51	(0)	363518
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
15	21.2	0.0	4.3	chr10	1048784	1048830	(132748592)	+	(GCCCC)n	Simple_repeat	1	47	(0)	372218
2231	10.8	0.0	3.2	chr10	3741065	3741379	(130056043)	C	AluY	SINE/Alu	(5)	306	2	375499
1567	21.6	10.2	5.3	chr10	3741406	3741591	(130055831)	+	MLT2B2	LTR/ERVL	3	179	(336)	375500
4556	12.6	2.5	1.0	chr10	3741592	3742272	(130055150)	C	LTR8	LTR/ERV1	(0)	691	1	375501
192	30.0	1.6	0.0	chr10	3786657	3786716	(130010706)	C	MamSINE1	SINE/tRNA-RTE	(49)	241	181	375559
2158	17.9	13.7	0.0	chr10	3982809	3983288	(129814134)	C	MLT2B4	LTR/ERVL	(0)	556	1	375875
13	11.5	2.2	8.7	chr10	5813816	5813860	(127983562)	+	G-rich	Low_complexity	1	46	(0)	378340
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
2622	18.4	5.6	0.0	chr10	6796043	6796568	(127000854)	+	MER74A	LTR/ERVL	1	557	(1)	380088
2433	16.2	14.3	1.0	chr10	6918842	6919321	(126878101)	C	MLT2B4	LTR/ERVL	(2)	554	1	380268
237	32.8	4.9	8.1	chr10	6919322	6919433	(126877989)	+	L3	LINE/CR1	3986	4097	(2)	380267
2007	19.0	8.2	6.3	chr10	7491419	7491907	(126305515)	+	MLT2B1	LTR/ERVL	2	500	(20)	381113
18	8.5	2.3	6.8	chr10	13347639	13347681	(120449741)	+	(GCC)n	Simple_repeat	1	44	(0)	390593
1155	17.9	5.4	2.2	chr10	14394356	14394612	(119402810)	+	MLT2B3	LTR/ERVL	117	379	(338)	392378
2850	17.9	1.3	0.5	chr10	14699191	14699741	(119097681)	C	MLT2B1	LTR/ERVL	(0)	554	1	392908
1682	22.9	4.4	0.9	chr10	16242247	16242685	(117554737)	C	MLT2B4	LTR/ERVL	(58)	462	1	395443
736	25.2	11.3	3.2	chr10	16429540	16429822	(117367600)	C	MLT1J1	LTR/ERVL-MaLR	(115)	329	21	395801
2753	16.7	5.5	2.0	chr10	16793815	16794303	(117003119)	+	MLT2B2	LTR/ERVL	2	508	(7)	396396
472	25.5	10.1	2.4	chr10	16891767	16891931	(116905491)	+	MER20	DNA/hAT-Charlie	1	179	(40)	396533
21652	11.0	1.6	2.3	chr10	20364454	20370845	(113426577)	C	L1PB1	LINE/L1	(0)	6867	463	401981
3360	7.0	0.5	0.7	chr10	20370846	20371294	(113426128)	C	LTR7	LTR/ERV1	(2)	448	1	401982
9835	12.7	0.4	2.2	chr10	20371295	20371511	(113425911)	C	L1PB1	LINE/L1	(6400)	462	255	401981
46	2.2	0.0	0.0	chr10	21516769	21516814	(112280608)	+	(GGT)n	Simple_repeat	1	46	(0)	403857
41	2.4	0.0	0.0	chr10	21516876	21516917	(112280505)	+	(GCC)n	Simple_repeat	1	42	(0)	403858
2974	15.5	4.4	0.3	chr10	22864341	22864842	(110932580)	C	MLT2B4	LTR/ERVL	(52)	665	123	405927
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
13	13.5	4.3	6.2	chr10	27252856	27252901	(106544521)	+	(GCGCCGG)n	Simple_repeat	1	48	(0)	413156
1262	18.2	11.2	1.8	chr10	28428623	28428896	(105368526)	C	MLT2B4	LTR/ERVL	(253)	465	163	415073
2411	17.7	0.9	0.9	chr10	28428882	28429304	(105368118)	+	Tigger17b	DNA/TcMar-Tigger	651	1073	(0)	415075
41	28.6	2.1	0.7	chr10	28533143	28533283	(105264139)	+	(GCG)n	Simple_repeat	1	144	(0)	415306
19	16.9	0.0	5.8	chr10	28533488	28533539	(105263883)	+	(CCG)n	Simple_repeat	1	52	(0)	415307
2370	15.6	8.2	6.7	chr10	29270571	29271113	(104526309)	C	MLT2B4	LTR/ERVL	(6)	556	3	416598
429	34.8	3.9	2.6	chr10	29271215	29271444	(104525978)	C	MIR	SINE/MIR	(0)	262	30	416599
22	17.9	6.2	1.4	chr10	31928527	31928591	(101868831)	+	(CCG)n	Simple_repeat	1	69	(0)	420990
748	24.3	6.4	2.2	chr10	32003958	32004180	(101793242)	C	LTR41B	LTR/ERVL	(113)	645	413	421154
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
392	31.9	5.3	0.0	chr10	33722619	33722762	(100074660)	+	MIR	SINE/MIR	25	176	(86)	423679
2505	16.3	12.8	1.6	chr10	42849141	42849633	(90947789)	C	MLT2B4	LTR/ERVL	(0)	556	1	432645
2766	14.3	5.8	2.2	chr10	42849639	42849680	(90947742)	+	L1MA5	LINE/L1	5729	5775	(525)	432647
39	2.7	0.0	0.0	chr10	42849681	42849718	(90947704)	+	(GT)n	Simple_repeat	1	38	(0)	432648
2766	14.3	5.8	2.2	chr10	42849719	42850226	(90947196)	+	L1MA5	LINE/L1	5776	6300	(0)	432647
12	22.1	3.9	3.8	chr10	43397129	43397179	(90400243)	+	G-rich	Low_complexity	1	53	(0)	433410
13	19.8	1.6	8.1	chr10	43407227	43407287	(90390135)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	433435
2742	14.5	0.2	0.0	chr10	45154828	45155261	(88642161)	+	MER1A	DNA/hAT-Charlie	59	493	(36)	435742
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
12	24.7	4.4	4.2	chr10	46556178	46556245	(87241177)	+	G-rich	Low_complexity	1	71	(0)	437854
11	24.3	4.0	1.9	chr10	46556353	46556402	(87241020)	+	G-rich	Low_complexity	1	52	(0)	437855
12	16.4	0.0	7.5	chr10	48215727	48215766	(85581656)	+	(GAAGCA)n	Simple_repeat	1	40	(0)	440254
1498	18.8	5.5	5.8	chr10	48215822	48216209	(85581213)	+	MLT2B4	LTR/ERVL	164	524	(52)	440255
11	18.4	6.7	2.1	chr10	48306614	48306658	(85490764)	+	(GCGCGT)n	Simple_repeat	1	48	(0)	440378
29	0.0	0.0	0.0	chr10	51079680	51079704	(82717718)	+	(TG)n	Simple_repeat	1	25	(0)	444315
3815	11.9	4.8	6.1	chr10	52020368	52021072	(81776350)	C	MER50B	LTR/ERV1	(2)	695	1	445722
2243	11.8	0.0	0.0	chr10	52027800	52028088	(81769334)	C	AluSx1	SINE/Alu	(23)	289	1	445737
18	6.0	5.3	2.5	chr10	52028089	52028104	(81769318)	+	(TTA)n	Simple_repeat	1	17	(0)	445738
377	39.8	9.9	0.6	chr10	52030056	52030495	(81766927)	+	L2b	LINE/L2	2833	3324	(51)	445741
13	27.4	0.0	6.2	chr10	59709957	59710020	(74087402)	+	(CCCGG)n	Simple_repeat	1	64	(0)	455973
2937	19.7	8.1	6.3	chr10	60762268	60762688	(73034734)	+	L1MEc	LINE/L1	30	484	(5916)	457573
1917	14.8	21.7	2.7	chr10	60762689	60763098	(73034324)	+	MLT2B4	LTR/ERVL	1	519	(37)	457574
2050	14.3	0.0	0.3	chr10	63162338	63162638	(70634784)	C	AluSz	SINE/Alu	(12)	300	1	461289
27260	3.3	0.4	0.0	chr10	67230666	67236674	(66560748)	+	L1PA3	LINE/L1	128	6155	(0)	467208
3758	16.5	0.4	4.0	chr10	69520677	69521001	(64276421)	C	L1MB4	LINE/L1	(383)	5797	5476	471768
1460	10.8	1.0	0.0	chr10	69521020	69521223	(64276199)	+	MLT2B2	LTR/ERVL	1	206	(309)	471771
2839	16.9	5.2	2.4	chr10	69818451	69818953	(63978469)	C	MLT2B1	LTR/ERVL	(2)	518	1	472319
13	5.2	0.0	0.0	chr10	70145987	70146006	(63651416)	+	(CTC)n	Simple_repeat	1	20	(0)	472841
219	33.0	12.2	7.8	chr10	70903014	70903309	(62894113)	C	L2c	LINE/L2	(68)	3319	3009	474295
647	29.4	4.3	2.6	chr10	73998479	73998705	(59798717)	+	MIRb	SINE/MIR	30	260	(8)	480358
1045	16.0	0.0	0.0	chr10	74003071	74003226	(59794196)	C	AluSx	SINE/Alu	(10)	302	147	480369
11	20.7	5.1	0.0	chr10	77711446	77711484	(56085938)	+	(CTCCCCT)n	Simple_repeat	1	41	(0)	486456
340	21.5	2.2	5.4	chr10	78040915	78041007	(55756415)	+	FRAM	SINE/Alu	4	93	(83)	487045
603	16.0	8.7	3.4	chr10	78041011	78041129	(55756293)	C	FLAM_C	SINE/Alu	(16)	127	2	487046
502	7.3	0.0	0.0	chr10	78812189	78812256	(54985166)	C	MLT2B1	LTR/ERVL	(485)	69	2	488505
20	9.4	3.9	5.7	chr10	79445563	79445613	(54351809)	+	(CCGCTG)n	Simple_repeat	1	53	(0)	489639
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
189	32.4	11.2	1.8	chr10	86966554	86966666	(46830756)	C	MIRb	SINE/MIR	(48)	220	96	500485
723	22.9	9.1	7.9	chr10	87749820	87750123	(46047299)	+	LTR49	LTR/ERV1	5	312	(283)	501771
301	26.5	12.6	0.8	chr10	93496848	93496980	(40300442)	C	MIRb	SINE/MIR	(24)	244	94	511238
185	26.7	6.2	2.2	chr10	96514271	96514362	(37283060)	+	MIR	SINE/MIR	10	105	(157)	516114
22	24.1	1.4	2.7	chr10	96832658	96832729	(36964693)	+	(CCTCCC)n	Simple_repeat	1	73	(0)	516803
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
1739	15.6	3.2	1.1	chr10	97434609	97434883	(36362539)	+	AluJr	SINE/Alu	7	287	(25)	517982
1611	12.3	12.9	5.6	chr10	97434910	97435194	(36362228)	+	AluSx	SINE/Alu	1	309	(3)	517983
1039	14.6	0.6	0.0	chr10	99916866	99917023	(33880399)	+	AluSx4	SINE/Alu	145	303	(7)	522321
1922	13.3	0.4	0.0	chr10	99917076	99917339	(33880083)	+	AluSx	SINE/Alu	1	265	(47)	522322
2027	10.0	1.8	0.0	chr10	100365182	100365450	(33431972)	C	AluSq2	SINE/Alu	(39)	274	1	523213
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
19	4.0	0.0	0.0	chr10	101694598	101694623	(32102799)	+	(CCT)n	Simple_repeat	1	26	(0)	525477
19	14.5	4.2	2.0	chr10	101818126	101818173	(31979249)	+	(CCTCTC)n	Simple_repeat	1	50	(0)	525732
13	31.4	1.4	2.8	chr10	102120569	102120638	(31676784)	+	G-rich	Low_complexity	1	71	(0)	526332
15	13.7	7.5	0.0	chr10	102120787	102120826	(31676596)	+	(GAGCCG)n	Simple_repeat	1	43	(0)	526333
12	23.3	2.0	4.0	chr10	102133208	102133256	(31664166)	+	(GCGGCAG)n	Simple_repeat	1	50	(0)	526366
36	20.6	3.5	3.4	chr10	102743955	102744068	(31053354)	+	GA-rich	Low_complexity	1	118	(0)	527500
283	20.9	8.3	7.6	chr10	104268645	104268763	(29528659)	C	MER5A1	DNA/hAT-Charlie	(6)	160	41	530440
282	21.8	0.0	0.0	chr10	109934877	109934931	(23862491)	C	MIR3	SINE/MIR	(3)	205	151	538628
2909	15.0	1.5	8.2	chr10	112856763	112857320	(20940102)	C	MLT2B1	LTR/ERVL	(0)	520	1	543317
38	0.0	0.0	0.0	chr10	112857328	112857362	(20940060)	+	(TTCC)n	Simple_repeat	1	35	(0)	543318
284	37.1	5.5	6.4	chr10	113169055	113169320	(20628102)	+	L2b	LINE/L2	2990	3250	(125)	543849
1296	15.1	0.9	2.3	chr10	113169321	113169537	(20627885)	C	MER20	DNA/hAT-Charlie	(4)	215	2	543851
37	23.4	1.0	1.9	chr10	119542653	119542755	(14254667)	+	GA-rich	Low_complexity	1	104	(0)	554096
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
1584	17.8	7.0	4.8	chr10	121413793	121414182	(12383240)	C	MLT2B4	LTR/ERVL	(41)	479	1	557122
1727	24.2	14.2	1.9	chr10	121414199	121414791	(12382631)	+	MLT1E1A	LTR/ERVL-MaLR	1	678	(2)	557124
18	10.5	0.0	0.0	chr10	121975069	121975099	(11822323)	+	(GGGAGC)n	Simple_repeat	1	31	(0)	558054
14	15.2	0.0	7.1	chr10	121975098	121975152	(11822270)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	558055
15	13.9	0.0	0.0	chr10	127769902	127769925	(6027497)	+	(A)n	Simple_repeat	1	24	(0)	566605
2888	16.4	4.7	0.0	chr10	127769974	127770497	(6026925)	+	MLT2B4	LTR/ERVL	3	552	(4)	566606
17	23.1	1.5	4.5	chr10	127906985	127907050	(5890372)	+	(CGCCCC)n	Simple_repeat	1	67	(0)	566791
16	21.1	4.1	0.0	chr10	127907052	127907100	(5890322)	+	(CGGAGC)n	Simple_repeat	1	51	(0)	566792
4613	6.2	4.0	0.3	chr10	128174685	128175270	(5622152)	C	LTR14B	LTR/ERVK	(0)	608	1	567121
12	13.8	4.4	6.4	chr10	131900896	131900940	(1896482)	+	(CGCCCGC)n	Simple_repeat	1	47	(0)	571060
69	13.2	2.1	2.8	chr11	555141	555280	(134531342)	+	G-rich	Low_complexity	1	143	(0)	573557
17	13.1	7.1	0.0	chr11	556147	556188	(134530434)	+	(GGCCG)n	Simple_repeat	1	45	(0)	573559
19	23.2	2.4	5.8	chr11	576493	576576	(134510046)	+	(CGG)n	Simple_repeat	1	86	(0)	573583
1529	17.1	6.5	0.7	chr11	813100	813373	(134273249)	+	AluJr4	SINE/Alu	1	291	(21)	573977
22	13.2	10.3	1.3	chr11	925798	925865	(134160757)	+	(CGTG)n	Simple_repeat	1	75	(0)	574110
258	29.6	6.5	1.2	chr11	2888398	2888558	(132198064)	+	MLT1J2	LTR/ERVL-MaLR	34	203	(245)	576280
15	30.3	1.0	6.2	chr11	3092280	3092375	(131994247)	+	G-rich	Low_complexity	1	97	(0)	576572
2568	13.5	14.6	0.2	chr11	7984358	7984833	(127101789)	+	MLT2B4	LTR/ERVL	1	556	(0)	583336
1429	10.3	3.9	0.0	chr11	8687196	8687390	(126399232)	+	AluSp	SINE/Alu	79	281	(32)	584342
381	26.2	9.0	0.0	chr11	8688629	8688769	(126397853)	C	Charlie2a	DNA/hAT-Charlie	(1199)	1662	1508	584345
1598	29.0	8.2	2.6	chr11	10311315	10311951	(124774671)	C	L1ME5	LINE/L1	(25)	6169	5493	587350
2868	16.3	1.4	6.3	chr11	10311952	10312493	(124774129)	+	MLT2B2	LTR/ERVL	1	515	(0)	587351
2070	9.3	2.0	1.7	chr11	10795702	10795992	(124290630)	C	AluSp	SINE/Alu	(21)	292	1	588147
2074	15.3	18.1	2.8	chr11	11730636	11731014	(123355608)	+	MLT2B1	LTR/ERVL	3	464	(56)	589650
11	14.8	4.9	4.7	chr11	13277392	13277432	(121809190)	+	G-rich	Low_complexity	1	43	(0)	592124
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
3169	9.4	8.4	0.4	chr11	24707753	24708222	(110378400)	C	LTR10F	LTR/ERV1	(0)	511	1	610057
1663	21.4	2.6	2.1	chr11	24708223	24708367	(110378255)	C	MLT2B1	LTR/ERVL	(379)	141	3	610056
483	33.9	11.1	2.2	chr11	27611491	27611810	(107474812)	+	L2c	LINE/L2	2910	3261	(126)	614266
288	27.5	5.2	2.7	chr11	27622363	27622474	(107464148)	+	MIR3	SINE/MIR	57	171	(37)	614283
608	28.7	8.8	2.7	chr11	27622651	27623002	(107463620)	C	LTR16C	LTR/ERVL	(1)	537	89	614284
887	23.1	1.9	0.0	chr11	27623161	27623368	(107463254)	+	MIR	SINE/MIR	40	251	(11)	614285
970	19.1	8.4	2.0	chr11	27625893	27626138	(107460484)	+	MER102a	DNA/hAT-Charlie	58	320	(10)	614290
475	26.4	1.1	1.3	chr11	27627288	27627433	(107459189)	C	LTR88b	LTR/Gypsy?	(613)	249	94	614292
21826	12.7	2.6	1.2	chr11	28787393	28793742	(106292880)	C	L1PA8A	LINE/L1	(0)	6446	2	616071
703	24.8	10.2	0.5	chr11	35526507	35526709	(99559913)	C	MIR	SINE/MIR	(33)	229	5	626881
293	34.2	3.3	2.7	chr11	44894121	44894270	(90192352)	C	MIRb	SINE/MIR	(48)	220	70	641070
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
2163	16.6	5.0	3.2	chr11	46958637	46959075	(88127547)	C	MLT2B2	LTR/ERVL	(62)	453	5	644986
12	19.3	0.0	5.1	chr11	47565815	47565853	(87520769)	+	(CCCCGT)n	Simple_repeat	1	39	(0)	646186
12	14.4	0.0	0.0	chr11	47642477	47642500	(87444122)	+	(CGGA)n	Simple_repeat	1	24	(0)	646353
261	31.6	4.9	1.3	chr11	57568015	57568171	(77518451)	C	MamRep1879	DNA/hAT-Tip100?	(49)	167	5	654006
33	0.0	3.1	0.0	chr11	57639225	57639256	(77447366)	+	(TG)n	Simple_repeat	1	33	(0)	654188
12	17.5	0.0	5.6	chr11	57649539	57649574	(77437048)	+	G-rich	Low_complexity	1	36	(0)	654196
35	14.8	2.9	1.4	chr11	57649705	57649773	(77436849)	+	(TC)n	Simple_repeat	1	71	(0)	654197
3213	10.8	1.6	0.0	chr11	57651454	57651896	(77434726)	+	MLT2A2	LTR/ERVL	2	451	(2)	654199
2112	16.2	0.0	1.0	chr11	58000526	58000834	(77085788)	C	AluSz	SINE/Alu	(6)	306	1	654832
1896	18.9	2.2	3.2	chr11	58000835	58000946	(77085676)	C	MLT2B4	LTR/ERVL	(440)	116	1	654831
2031	13.8	4.7	2.2	chr11	58653629	58653999	(76432623)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	655797
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
421	36.7	1.3	3.8	chr11	60333897	60334131	(74752491)	+	L1M3c	LINE/L1	370	598	(5533)	658206
317	25.1	7.0	3.9	chr11	61567148	61567288	(73519334)	+	MIRc	SINE/MIR	44	198	(10)	660427
12	17.5	3.1	0.0	chr11	61827628	61827659	(73258963)	+	(CCCG)n	Simple_repeat	1	33	(0)	660908
1472	12.7	5.6	0.8	chr11	61963770	61964006	(73122616)	+	AluSx3	SINE/Alu	49	297	(14)	661184
11	34.9	1.4	1.4	chr11	62601572	62601641	(72484981)	+	(CCGCCG)n	Simple_repeat	1	71	(0)	662388
13	22.1	2.7	0.0	chr11	62646561	62646597	(72440025)	+	(CCG)n	Simple_repeat	1	38	(0)	662469
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1491	12.8	13.2	0.4	chr11	62666066	62666323	(72420299)	+	AluJo	SINE/Alu	1	296	(16)	662526
1713	16.2	1.9	0.0	chr11	62850390	62850654	(72235968)	+	AluJb	SINE/Alu	19	288	(24)	662955
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
625	29.9	13.6	2.1	chr11	62889212	62889536	(72197086)	C	L2a	LINE/L2	(2)	3424	3057	663048
865	23.3	16.6	1.6	chr11	62889665	62890031	(72196591)	C	MER77B	LTR/ERVL	(23)	677	245	663049
446	22.2	7.5	0.0	chr11	62890123	62890221	(72196401)	C	MER77B	LTR/ERVL	(593)	107	1	663049
359	24.0	20.5	1.2	chr11	62890234	62890406	(72196216)	C	L2a	LINE/L2	(549)	2870	2656	663048
2336	9.8	0.7	0.0	chr11	62890859	62891164	(72195458)	+	AluSq	SINE/Alu	1	308	(5)	663051
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
23	14.9	2.2	0.0	chr11	63763731	63763775	(71322847)	+	(CGG)n	Simple_repeat	1	46	(0)	664333
27	23.1	3.4	2.2	chr11	63764004	63764092	(71322530)	+	(CTC)n	Simple_repeat	1	92	(0)	664334
17	17.2	2.6	0.0	chr11	63764420	63764458	(71322164)	+	(CCT)n	Simple_repeat	1	40	(0)	664335
13	15.9	2.7	2.6	chr11	64234092	64234128	(70852494)	+	(CAGCGG)n	Simple_repeat	1	38	(0)	665230
14	24.3	2.0	2.0	chr11	64246776	64246825	(70839797)	+	(GCGGCG)n	Simple_repeat	1	51	(0)	665248
13	21.8	1.7	6.6	chr11	64246852	64246911	(70839711)	+	(CCGCCC)n	Simple_repeat	1	61	(0)	665249
897	13.5	0.0	0.0	chr11	64539654	64539786	(70546836)	C	FLAM_C	SINE/Alu	(10)	133	1	665819
12	29.7	3.2	1.5	chr11	64713287	64713349	(70373273)	+	(CGCGCGT)n	Simple_repeat	1	65	(0)	666089
2408	8.0	0.7	0.0	chr11	64761904	64762203	(70324419)	+	AluSx	SINE/Alu	1	302	(10)	666174
204	32.1	5.8	5.8	chr11	65354350	65354435	(69732187)	C	MIRb	SINE/MIR	(59)	209	124	667384
13	8.5	4.0	0.0	chr11	65500555	65500579	(69586043)	+	(GAAG)n	Simple_repeat	1	26	(0)	667664
2443	8.5	1.0	0.0	chr11	65507915	65508220	(69578402)	+	AluSp	SINE/Alu	1	309	(4)	667667
183	26.5	8.1	5.6	chr11	65541044	65541115	(69545507)	C	MIRb	SINE/MIR	(95)	173	100	667740
225	29.2	12.3	5.1	chr11	65852127	65852344	(69234278)	+	L2b	LINE/L2	2928	3173	(214)	668309
236	25.0	9.3	4.3	chr11	66268242	66268333	(68818289)	C	MIRc	SINE/MIR	(55)	213	117	669149
319	24.7	2.3	1.2	chr11	66363907	66363992	(68722630)	C	MIR3	SINE/MIR	(15)	193	107	669324
259	23.4	0.0	5.8	chr11	66479165	66479250	(68607372)	C	MIR1_Amn	SINE/MIR	(65)	165	85	669604
15	24.7	5.6	4.3	chr11	66857009	66857097	(68229525)	+	(CCCG)n	Simple_repeat	1	94	(0)	670384
2178	10.9	1.0	0.0	chr11	67103388	67103681	(67982941)	C	AluSz	SINE/Alu	(15)	297	1	670962
200	33.5	14.1	2.3	chr11	67103734	67103907	(67982715)	+	L2b	LINE/L2	2326	2523	(896)	670963
15	21.8	0.0	4.3	chr11	67372841	67372886	(67713736)	+	(CGC)n	Simple_repeat	1	46	(0)	671513
22	18.1	2.0	0.0	chr11	67372944	67372993	(67713629)	+	(CGGCC)n	Simple_repeat	1	51	(0)	671514
17	22.7	3.5	1.7	chr11	67372991	67373048	(67713574)	+	(CCCT)n	Simple_repeat	1	60	(0)	671515
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
268	31.7	1.8	7.5	chr11	68691416	68691589	(66395033)	C	L2a	LINE/L2	(79)	3347	3184	673806
2250	10.5	2.6	0.0	chr11	68691757	68692052	(66394570)	+	AluSz	SINE/Alu	8	311	(1)	673807
14	15.2	2.5	4.9	chr11	69049034	69049073	(66037549)	+	(GGC)n	Simple_repeat	1	41	(0)	674461
337	27.0	9.3	3.1	chr11	69131505	69131634	(65954988)	C	MIRb	SINE/MIR	(31)	237	99	674568
18	17.4	6.7	1.6	chr11	70270768	70270827	(64815795)	+	G-rich	Low_complexity	1	64	(0)	676599
17	23.4	0.0	6.0	chr11	72239933	72239999	(62846623)	+	(GGCCCG)n	Simple_repeat	1	67	(0)	679594
12	23.5	3.3	4.8	chr11	72239979	72240038	(62846584)	+	(GGCGGA)n	Simple_repeat	1	62	(0)	679595
70	0.0	0.0	0.0	chr11	73142812	73142871	(61943751)	+	(GT)n	Simple_repeat	1	60	(0)	681263
15	0.0	0.0	0.0	chr11	73598495	73598511	(61488111)	+	(CA)n	Simple_repeat	1	17	(0)	682199
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
6324	6.7	2.2	4.8	chr11	75409208	75410878	(59675744)	C	SVA_E	Retroposon/SVA	(23)	1359	154	685998
25286	6.3	0.8	0.6	chr11	75974666	75980018	(59106604)	C	L1PA6	LINE/L1	(781)	5365	4	687138
675	1.3	0.0	0.0	chr11	76235513	76235587	(58851035)	+	tRNA-Pro-CCY	tRNA	1	75	(0)	687581
614	2.7	0.0	0.0	chr11	76235824	76235896	(58850726)	C	tRNA-Pro-CCA	tRNA	(2)	73	1	687582
187	22.6	5.4	0.0	chr11	76799162	76799214	(58287408)	+	MIRb	SINE/MIR	97	152	(116)	688698
3061	16.2	7.3	1.4	chr11	88434274	88434850	(46651772)	C	LTR18B	LTR/ERVL	(0)	614	1	708575
11455	15.3	1.2	1.5	chr11	90772712	90775439	(44311183)	C	L1PA10	LINE/L1	(3544)	2917	180	711882
16	9.7	0.0	0.0	chr11	92550765	92550786	(42535836)	+	(T)n	Simple_repeat	1	22	(0)	714330
2187	10.7	3.8	0.0	chr11	93116651	93116978	(41969644)	+	MER61A	LTR/ERV1	1	341	(0)	715152
3040	17.0	13.1	1.5	chr11	93116980	93117654	(41968968)	+	MER4CL34	LTR/ERV1	1	765	(0)	715153
302	21.2	19.5	1.5	chr11	93585861	93585994	(41500628)	C	MIRb	SINE/MIR	(100)	168	5	715813
406	32.8	4.5	2.6	chr11	93727965	93728158	(41358464)	C	L3	LINE/CR1	(63)	4036	3839	716061
640	17.0	7.5	3.6	chr11	93729191	93729330	(41357292)	+	AluJb	SINE/Alu	43	188	(124)	716062
300	21.9	2.1	0.0	chr11	93729331	93729392	(41357230)	+	AluJb	SINE/Alu	220	284	(17)	716062
1296	19.9	8.2	1.5	chr11	93734782	93735053	(41351569)	C	AluJr	SINE/Alu	(20)	292	1	716065
12	21.8	2.7	0.0	chr11	94401299	94401335	(40685287)	+	G-rich	Low_complexity	1	38	(0)	717061
45941	10.3	2.1	2.0	chr11	94650510	94657040	(40429582)	+	HERV4_I-int	LTR/ERV1	1	6539	(0)	717469
492	17.7	4.8	2.8	chr11	94657041	94657173	(40429449)	+	MER51B	LTR/ERV1	1	138	(239)	717469
327	11.1	0.0	1.8	chr11	94657186	94657240	(40429382)	+	MER51B	LTR/ERV1	109	162	(215)	717469
1686	16.3	4.8	1.0	chr11	94657233	94657535	(40429087)	+	MER51B	LTR/ERV1	63	377	(0)	717470
17	6.0	8.6	0.0	chr11	94768325	94768359	(40318263)	+	(GCGGGGA)n	Simple_repeat	1	38	(0)	717651
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
741	25.9	12.0	11.4	chr11	103487062	103487271	(31599351)	C	L1ME3E	LINE/L1	(18)	6224	6000	729515
2687	18.0	2.5	4.4	chr11	103487272	103487725	(31598897)	+	MLT2B2	LTR/ERVL	3	460	(55)	729516
1865	17.3	3.2	13.3	chr11	107991772	107992231	(27094391)	C	MLT2D	LTR/ERVL	(0)	414	3	735995
3717	27.2	6.6	8.5	chr11	107992232	107992662	(27093960)	C	HERV16-int	LTR/ERVL	(3451)	1545	1124	735970
2573	15.8	13.3	1.2	chr11	112594470	112594957	(22491665)	+	MLT2B4	LTR/ERVL	1	556	(0)	743371
1234	18.6	4.1	1.6	chr11	116373933	116374344	(18712278)	C	MLT2B1	LTR/ERVL	(0)	567	1	749180
13	26.6	0.0	5.1	chr11	118126705	118126763	(16959859)	+	(TACCAAG)n	Simple_repeat	1	59	(0)	752372
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
2089	9.5	6.0	0.0	chr11	119416470	119416752	(15669870)	C	AluSz	SINE/Alu	(7)	305	5	754840
202	29.1	12.7	0.0	chr11	120236895	120237004	(14849618)	+	MIR3	SINE/MIR	59	184	(24)	756196
619	14.4	0.0	3.9	chr11	122560038	122560141	(12526481)	+	AluSq2	SINE/Alu	206	305	(8)	759750
674	14.8	0.0	0.0	chr11	122560147	122560247	(12526375)	+	AluSq2	SINE/Alu	208	308	(5)	759751
450	14.3	11.8	0.7	chr11	122560248	122560392	(12526230)	+	L1MA6	LINE/L1	7431	7576	(155)	759733
656	22.8	12.4	1.6	chr11	126481020	126481206	(8605416)	C	L2a	LINE/L2	(15)	3411	3202	766152
362	36.1	14.3	4.6	chr11	126481212	126481967	(8604655)	+	L2c	LINE/L2	2112	2952	(467)	766153
28	27.2	0.7	6.4	chr11	130002074	130002225	(5084397)	+	(GCGCCCG)n	Simple_repeat	1	143	(0)	771150
2723	19.2	2.2	4.1	chr11	130843147	130843657	(4242965)	C	MLT2B2	LTR/ERVL	(14)	501	1	772490
34	8.0	1.8	1.8	chr11	133083111	133083165	(2003457)	+	(CA)n	Simple_repeat	1	56	(0)	775453
1921	15.7	21.1	1.1	chr11	135075695	135076563	(10059)	+	TAR1	Satellite/telo	1	1042	(938)	778016
33	3.1	0.0	0.0	chr12	990935	990967	(132284342)	+	(GT)n	Simple_repeat	1	33	(0)	779867
226	33.8	11.8	2.8	chr12	6538722	6538937	(126736372)	+	MIR	SINE/MIR	15	252	(10)	788908
345	29.8	7.5	6.8	chr12	6539035	6539183	(126736126)	+	MIRb	SINE/MIR	15	176	(92)	788910
1984	12.4	0.3	0.7	chr12	6539184	6539465	(126735844)	+	AluSx	SINE/Alu	15	295	(17)	788911
2166	7.8	0.7	1.0	chr12	6556345	6556640	(126718669)	C	AluSx1	SINE/Alu	(17)	295	1	788937
14	27.8	3.6	0.0	chr12	6689100	6689155	(126586154)	+	(GGC)n	Simple_repeat	1	58	(0)	789180
14	13.2	4.3	6.1	chr12	6689168	6689214	(126586095)	+	GA-rich	Low_complexity	1	49	(0)	789181
15	22.0	2.0	3.9	chr12	6766353	6766403	(126508906)	+	(CGG)n	Simple_repeat	1	52	(0)	789350
34	19.1	1.3	1.2	chr12	6821734	6821812	(126453497)	+	G-rich	Low_complexity	1	80	(0)	789474
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
2120	12.9	0.0	0.7	chr12	6939501	6939803	(126335506)	C	AluJb	SINE/Alu	(11)	301	1	789671
181	38.6	5.0	4.2	chr12	6941178	6941296	(126334013)	+	MIR	SINE/MIR	20	139	(123)	789674
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
717	9.0	5.1	0.0	chr12	7800355	7800465	(125474844)	C	HY1	scRNA	(0)	119	3	791059
1983	14.0	0.0	1.0	chr12	7800474	7800773	(125474536)	C	AluSq2	SINE/Alu	(16)	297	1	791060
1810	23.6	18.8	4.2	chr12	7916935	7917439	(125357870)	+	LTR41B	LTR/ERVL	57	673	(85)	791375
1657	23.8	10.3	1.2	chr12	8475382	8475811	(124799498)	C	MLT2B1	LTR/ERVL	(46)	474	1	792327
12	25.3	2.4	0.0	chr12	8475819	8475860	(124799449)	+	A-rich	Low_complexity	1	43	(0)	792328
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
45242	4.2	0.5	0.2	chr12	8788669	8793938	(124481371)	+	HERV9NC-int	LTR/ERV1	1	5284	(834)	792907
5449	18.5	13.1	5.2	chr12	9065174	9066669	(124208640)	+	MER52D	LTR/ERV1	490	2121	(2)	793384
14	22.7	2.0	3.9	chr12	11500684	11500733	(121774576)	+	(GCC)n	Simple_repeat	1	51	(0)	796566
2436	14.8	11.9	3.6	chr12	13376414	13376888	(119898421)	C	MLT2B1	LTR/ERVL	(0)	520	1	799772
24	25.9	3.3	2.1	chr12	14365688	14365778	(118909531)	+	(GCG)n	Simple_repeat	1	94	(0)	801269
14	28.1	1.9	0.0	chr12	14693947	14693998	(118581311)	+	(CAACAA)n	Simple_repeat	1	53	(0)	801770
486	33.5	2.7	1.2	chr12	14694001	14694254	(118581055)	C	MIR	SINE/MIR	(3)	259	2	801771
878	17.4	0.8	0.0	chr12	14695825	14695956	(118579353)	C	FLAM_C	SINE/Alu	(10)	133	1	801775
7265	5.3	0.4	0.1	chr12	14697082	14698011	(118577298)	C	L1PA7	LINE/L1	(19)	6135	5204	801777
301	25.6	8.1	6.0	chr12	14703085	14703217	(118572092)	+	Tigger13a	DNA/TcMar-Tigger	143	278	(493)	801787
11327	10.4	0.7	0.0	chr12	16536909	16538477	(116736832)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	804412
287	39.0	7.8	2.7	chr12	18752383	18752601	(114522708)	C	L2b	LINE/L2	(0)	3375	3145	807032
442	26.5	11.2	0.6	chr12	18752663	18752829	(114522480)	+	LTR16A	LTR/ERVL	140	326	(112)	807033
1790	20.0	11.1	11.1	chr12	19426548	19426621	(113848688)	+	MLT2B2	LTR/ERVL	1	73	(442)	808171
2216	9.7	2.9	0.0	chr12	19426622	19426919	(113848390)	+	AluSx	SINE/Alu	1	307	(5)	808172
227	36.2	11.7	2.6	chr12	19528840	19529103	(113746206)	C	L2c	LINE/L2	(24)	3363	3073	808376
180	25.0	3.6	4.8	chr12	19529176	19529259	(113746050)	C	L2c	LINE/L2	(460)	2959	2877	808376
19	22.1	5.1	3.6	chr12	25386118	25386196	(107889113)	+	(CGC)n	Simple_repeat	1	83	(0)	816427
15	18.7	2.2	4.3	chr12	26195810	26195855	(107079454)	+	(CTG)n	Simple_repeat	1	47	(0)	817648
784	18.1	16.3	2.9	chr12	32013489	32013808	(101261501)	C	MER34A1	LTR/ERV1	(0)	571	185	826581
9218	14.0	3.0	6.3	chr12	41147544	41149230	(92126079)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	834685
313	25.8	3.8	9.2	chr12	46357773	46357913	(86917396)	+	MER5A	DNA/hAT-Charlie	35	167	(22)	842149
16	29.1	1.4	4.0	chr12	46383333	46383405	(86891904)	+	GA-rich	Low_complexity	1	74	(0)	842183
2447	7.4	0.0	0.3	chr12	49126269	49126566	(84148743)	C	AluY	SINE/Alu	(14)	297	1	846442
1487	8.4	1.9	0.5	chr12	49126570	49126772	(84148537)	C	AluSx	SINE/Alu	(106)	206	1	846441
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
90	2.3	0.0	0.0	chr12	49264788	49264876	(84010433)	+	(CCCTTCCTC)n	Simple_repeat	1	89	(0)	846829
1141	15.4	13.0	2.6	chr12	49273843	49274076	(84001233)	+	AluJb	SINE/Alu	34	295	(17)	846845
254	25.0	3.6	12.9	chr12	49274077	49274127	(84001182)	C	MER5A1	DNA/hAT-Charlie	(54)	112	71	846844
1600	16.3	6.1	0.0	chr12	49274128	49274285	(84001024)	C	AluJo	SINE/Alu	(18)	294	122	846846
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
2171	10.9	0.0	0.3	chr12	53043330	53043612	(80231697)	+	AluSx4	SINE/Alu	1	282	(28)	853983
1859	14.7	3.2	0.4	chr12	53043614	53043886	(80231423)	+	AluJo	SINE/Alu	11	291	(21)	853984
15	21.4	0.0	0.0	chr12	53371585	53371622	(79903687)	+	(TCCCC)n	Simple_repeat	1	38	(0)	854610
2238	10.0	0.7	0.0	chr12	53663763	53664052	(79611257)	C	AluSp	SINE/Alu	(21)	292	1	855204
13	18.9	0.0	0.0	chr12	54282595	54282624	(78992685)	+	(TGG)n	Simple_repeat	1	30	(0)	856173
1586	13.6	7.8	1.5	chr12	54287615	54287879	(78987430)	C	AluSx1	SINE/Alu	(29)	283	1	856176
2161	9.4	0.0	8.5	chr12	54288509	54288641	(78986668)	+	AluSx3	SINE/Alu	1	131	(180)	856177
1756	10.1	8.2	0.8	chr12	54288642	54288899	(78986410)	+	AluSx3	SINE/Alu	1	279	(32)	856178
18	0.0	0.0	0.0	chr12	56117139	56117158	(77158151)	+	(T)n	Simple_repeat	1	20	(0)	858937
17	27.1	4.1	1.3	chr12	57089052	57089124	(76186185)	+	(GCGGAG)n	Simple_repeat	1	76	(0)	860682
9447	10.5	5.0	3.1	chr12	58276765	58278201	(74997108)	+	THE1B-int	LTR/ERVL-MaLR	2	1466	(114)	862549
2041	9.4	0.4	1.1	chr12	59316425	59316691	(73958618)	C	AluSc	SINE/Alu	(44)	265	1	863953
994	27.2	6.7	8.8	chr12	59316861	59317271	(73958038)	C	L1MD2	LINE/L1	(69)	6290	5885	863954
343	24.9	10.3	1.9	chr12	59317631	59317790	(73957519)	C	LTR46	LTR/ERV1	(4)	456	282	863956
468	20.2	2.0	0.0	chr12	59317883	59317981	(73957328)	C	LTR46	LTR/ERV1	(359)	101	1	863956
890	24.6	0.8	5.5	chr12	59317982	59318235	(73957074)	C	L1MD2	LINE/L1	(411)	5831	5590	863954
2300	12.5	0.0	0.0	chr12	59318789	59319093	(73956216)	+	AluSg	SINE/Alu	1	305	(5)	863959
1198	29.4	5.4	3.7	chr12	59319094	59319273	(73956036)	C	L1MEf	LINE/L1	(5648)	552	367	863958
392	32.9	7.4	1.9	chr12	59320218	59320371	(73954938)	C	MIR3	SINE/MIR	(41)	167	9	863962
1338	13.0	1.8	0.9	chr12	59324041	59324258	(73951051)	C	HERVH-int	LTR/ERV1	(1894)	5819	5600	863965
4208	14.9	0.9	0.1	chr12	59324260	59324916	(73950393)	C	HERVH-int	LTR/ERV1	(2564)	5149	4488	863965
2552	15.4	5.4	8.3	chr12	59556452	59556982	(73718327)	C	MLT2B2	LTR/ERVL	(0)	515	1	864234
359	24.7	1.2	0.0	chr12	59557028	59557108	(73718201)	+	MLT1N2	LTR/ERVL-MaLR	2	83	(479)	864235
2297	9.9	0.0	1.3	chr12	65897678	65897980	(67377329)	+	AluSq2	SINE/Alu	1	299	(14)	873515
12	11.5	3.3	3.2	chr12	67648900	67648929	(65626380)	+	GA-rich	Low_complexity	1	31	(0)	876223
2280	13.1	1.6	3.0	chr12	68506432	68506800	(64768509)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	877507
380	29.1	4.4	10.5	chr12	68506937	68507155	(64768154)	C	MamGypLTR3a	LTR/Gypsy	(501)	480	276	877508
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
2106	10.9	0.7	1.3	chr12	71839102	71839403	(61435906)	+	AluSx	SINE/Alu	1	300	(12)	882972
290	32.8	10.1	0.7	chr12	71839404	71839458	(61435851)	C	MIRc	SINE/MIR	(200)	68	6	882971
1954	17.7	6.2	5.4	chr12	92122845	92123305	(41152004)	C	MLT2B1	LTR/ERVL	(50)	470	6	910976
769	28.0	4.3	1.0	chr12	92123378	92123484	(41151825)	C	MIR	SINE/MIR	(2)	260	150	910980
15	27.2	0.0	2.0	chr12	93442319	93442369	(39832940)	+	(CATT)n	Simple_repeat	1	51	(0)	913434
28158	1.3	0.2	0.2	chr12	96315943	96321971	(36953338)	+	L1PA2	LINE/L1	124	6154	(1)	918842
458	24.6	0.8	2.4	chr12	101773969	101774093	(31501216)	+	MLT1I	LTR/ERVL-MaLR	289	411	(0)	927911
958	16.6	0.6	0.0	chr12	102679562	102679736	(30595573)	+	MLT2B1	LTR/ERVL	1	176	(344)	929411
228	30.9	0.0	0.0	chr12	102679739	102679822	(30595487)	C	L1M5	LINE/L1	(363)	5810	5727	929412
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
19	26.1	5.4	0.0	chr12	104064727	104064800	(29210509)	+	(GGC)n	Simple_repeat	1	78	(0)	931798
172	15.9	4.9	4.2	chr12	116737305	116737777	(16537532)	+	GA-rich	Low_complexity	1	496	(0)	958800
19	14.8	3.5	5.0	chr12	116737904	116737961	(16537348)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	958801
30	19.5	2.8	1.4	chr12	117969563	117969652	(15305657)	+	(GT)n	Simple_repeat	1	91	(0)	961516
1949	14.9	15.9	5.4	chr12	119307921	119308121	(13967188)	+	MLT2B4	LTR/ERVL	1	206	(350)	964471
2028	12.7	1.4	0.7	chr12	120195650	120195940	(13079369)	+	AluSg	SINE/Alu	1	293	(17)	966422
1628	12.9	0.0	7.9	chr12	120195941	120196064	(13079245)	+	AluSx1	SINE/Alu	134	257	(55)	966421
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
30	20.6	0.0	0.0	chr12	121804065	121804131	(11471178)	+	(GGCAGC)n	Simple_repeat	1	67	(0)	970354
11	19.6	2.8	9.6	chr12	122774536	122774606	(10500703)	+	G-rich	Low_complexity	1	73	(0)	972649
15	20.2	0.0	8.3	chr12	123762140	123762199	(9513110)	+	G-rich	Low_complexity	1	60	(0)	974872
1215	16.6	4.7	0.5	chr12	124911273	124911477	(8363832)	C	AluSx1	SINE/Alu	(21)	291	78	977136
2806	16.4	10.7	1.2	chr12	125180304	125180896	(8094413)	+	MLT2B5	LTR/ERVL	2	657	(60)	977720
1633	19.0	1.0	1.0	chr12	128824186	128824474	(4450835)	C	AluJr	SINE/Alu	(15)	297	9	983926
252	24.8	23.5	0.7	chr13	21148209	21148346	(93215982)	+	MIR	SINE/MIR	81	259	(3)	995614
13	29.7	0.0	7.8	chr13	24160652	24160741	(90203587)	+	G-rich	Low_complexity	1	90	(0)	999897
14	20.0	0.0	7.5	chr13	26051966	26052018	(88312310)	+	(CCGCC)n	Simple_repeat	1	53	(0)	1002630
1884	13.2	2.4	0.0	chr13	27257626	27257906	(87106422)	+	AluSz	SINE/Alu	4	291	(21)	1004599
2771	21.0	4.1	4.1	chr13	27257907	27258484	(87105844)	C	L1MD1	LINE/L1	(157)	6085	5514	1004598
900	19.3	1.3	0.0	chr13	27258751	27258900	(87105428)	+	FRAM	SINE/Alu	3	154	(22)	1004600
205	26.6	4.5	0.0	chr13	27259023	27259086	(87105242)	C	L2c	LINE/L2	(81)	3306	3240	1004601
844	23.2	11.4	6.0	chr13	28297390	28297885	(86066443)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	9	1006515
2324	28.9	9.7	6.9	chr13	29454880	29455698	(84908630)	+	L1MEf	LINE/L1	38	1227	(1525)	1008185
24	23.2	5.3	2.0	chr13	31199925	31200018	(83164310)	+	(GGC)n	Simple_repeat	1	99	(0)	1011022
28128	1.3	0.0	0.5	chr13	39000818	39006875	(75357453)	C	L1PA2	LINE/L1	(3)	6152	126	1022035
2516	6.8	0.0	0.3	chr13	42861532	42861826	(71502502)	C	AluY	SINE/Alu	(17)	294	1	1028008
191	24.3	6.0	5.4	chr13	42864941	42865021	(71499307)	C	L2a	LINE/L2	(15)	3411	3276	1028016
188	23.0	0.0	9.0	chr13	42865031	42865097	(71499231)	C	MIR3	SINE/MIR	(133)	75	15	1028017
2323	15.5	11.4	5.6	chr13	44321722	44322207	(70042121)	C	MLT2B1	LTR/ERVL	(0)	520	3	1030112
23	20.5	4.4	4.2	chr13	49220073	49220163	(65144165)	+	G-rich	Low_complexity	1	95	(0)	1037997
14	23.7	1.9	3.6	chr13	49220195	49220248	(65144080)	+	(GCGCA)n	Simple_repeat	1	55	(0)	1037998
316	25.1	17.6	1.6	chr13	51179478	51179663	(63184665)	+	MIRb	SINE/MIR	46	267	(1)	1041193
449	25.1	8.1	0.6	chr13	51181895	51182066	(63182262)	+	LTR16E2	LTR/ERVL	362	547	(21)	1041196
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
27	0.0	0.0	0.0	chr13	52600454	52600479	(61763849)	+	(GCCCA)n	Simple_repeat	1	26	(0)	1043341
7326	13.3	0.4	0.6	chr13	54032747	54033841	(60330487)	C	THE1C-int	LTR/ERVL-MaLR	(6)	1574	482	1045432
881	11.4	0.0	1.5	chr13	55000873	55001005	(59363323)	+	MER41C	LTR/ERV1	1	131	(390)	1046610
1239	17.1	4.1	0.0	chr13	55000997	55001207	(59363121)	+	LTR1B1	LTR/ERV1	599	818	(0)	1046611
210	38.1	10.4	5.2	chr13	55567947	55568266	(58796062)	C	L3	LINE/CR1	(185)	3914	3574	1047340
466	24.8	14.8	0.0	chr13	55570523	55570683	(58793645)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1047345
823	24.6	8.7	9.8	chr13	55571389	55571448	(58792880)	C	MER67D	LTR/ERV1	(203)	311	227	1047346
2042	14.1	8.2	0.9	chr13	55571449	55571785	(58792543)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1047347
14	18.1	0.0	0.0	chr13	55573776	55573807	(58790521)	+	(ATACAC)n	Simple_repeat	1	32	(0)	1047349
1820	29.5	6.9	7.9	chr13	55576157	55578219	(58786109)	+	L1M2	LINE/L1	1	1756	(5453)	1047352
1658	16.6	2.8	14.6	chr13	59447911	59448354	(54915974)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1052116
1911	17.3	14.4	2.9	chr13	75745526	75746008	(38618320)	+	MLT2B4	LTR/ERVL	1	548	(8)	1073830
1318	18.8	4.2	0.0	chr13	76946866	76947094	(37417234)	+	MLT2B4	LTR/ERVL	1	239	(317)	1075485
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
1627	22.1	14.0	4.1	chr13	78006616	78007077	(36357251)	C	MLT2B2	LTR/ERVL	(0)	515	1	1076949
21230	8.3	0.8	2.7	chr13	79274494	79277542	(35086786)	+	HERVH-int	LTR/ERV1	1	2992	(4721)	1078707
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
221	23.6	5.2	1.8	chr13	91358692	91358747	(23005581)	+	L2c	LINE/L2	3110	3167	(259)	1094141
2605	17.2	7.0	1.2	chr13	95467640	95468150	(18896178)	C	MLT2B4	LTR/ERVL	(10)	546	4	1100165
33	0.0	0.0	0.0	chr13	95468220	95468250	(18896078)	+	(TTTG)n	Simple_repeat	1	31	(0)	1100166
1454	22.1	10.4	4.5	chr13	95468255	95468454	(18895874)	C	L1MC5a	LINE/L1	(1156)	1621	1408	1100167
26	28.2	1.2	0.0	chr13	97976248	97976327	(16388001)	+	(CCCCGA)n	Simple_repeat	1	81	(0)	1103821
21	24.0	4.0	1.3	chr13	99981545	99981619	(14382709)	+	(GCGCGT)n	Simple_repeat	1	78	(0)	1107135
1688	18.0	1.2	0.3	chr13	100985487	100985802	(13378526)	C	MER89	LTR/ERV1	(0)	559	241	1108801
2603	14.3	4.4	7.2	chr13	100985803	100986291	(13378037)	+	MLT2B2	LTR/ERVL	1	475	(40)	1108802
1719	20.2	16.0	2.0	chr13	101170099	101170542	(13193786)	C	MLT2B1	LTR/ERVL	(0)	520	3	1109022
2352	19.3	5.0	1.1	chr13	102513807	102514341	(11849987)	+	L1MC3	LINE/L1	6899	7455	(330)	1110889
1688	16.4	1.5	1.8	chr13	102514344	102514678	(11849650)	+	MLT2B4	LTR/ERVL	1	334	(222)	1110890
1898	25.3	9.0	3.2	chr13	103317333	103318811	(11045517)	C	L1MEg	LINE/L1	(3112)	3034	1464	1112016
2701	21.1	0.4	0.4	chr13	103318819	103319331	(11044997)	+	MLT2B1	LTR/ERVL	3	515	(5)	1112017
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
759	32.8	11.2	5.0	chr14	21202279	21202952	(85840766)	C	L2b	LINE/L2	(0)	3375	2628	1129268
2507	9.0	0.7	0.0	chr14	21260683	21260981	(85782737)	+	AluSg	SINE/Alu	1	301	(9)	1129370
702	20.6	1.2	6.9	chr14	21260982	21261156	(85782562)	C	AluJo	SINE/Alu	(32)	280	116	1129371
294	26.4	7.8	3.6	chr14	23469077	23469186	(83574532)	C	MIR3	SINE/MIR	(49)	159	45	1132899
18	16.3	0.0	0.0	chr14	30622341	30622376	(76421342)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	1142089
17	11.7	0.0	7.0	chr14	34462042	34462084	(72581634)	+	(CCCGCG)n	Simple_repeat	1	43	(0)	1147842
11	6.3	11.4	2.6	chr14	34462178	34462212	(72581506)	+	(CCAGCG)n	Simple_repeat	1	39	(0)	1147843
35	21.7	3.9	6.2	chr14	34462243	34462398	(72581320)	+	(CCGC)n	Simple_repeat	1	162	(0)	1147844
2123	14.4	9.9	0.3	chr14	37124666	37125048	(69918670)	+	MSTA	LTR/ERVL-MaLR	1	424	(4)	1152512
809	25.4	5.5	2.8	chr14	38198577	38198787	(68844931)	+	MIR	SINE/MIR	2	218	(44)	1153971
449	32.6	6.3	2.9	chr14	38199438	38199680	(68844038)	C	LTR78	LTR/ERV1	(848)	456	205	1153972
615	34.2	15.1	1.4	chr14	38201252	38201735	(68841983)	C	MER115	DNA/hAT-Tip100	(75)	618	57	1153975
2212	11.6	1.6	0.0	chr14	38203283	38203584	(68840134)	+	AluSx1	SINE/Alu	6	312	(0)	1153977
1732	18.2	0.3	1.4	chr14	38205512	38205795	(68837923)	+	AluJr	SINE/Alu	1	284	(28)	1153980
3678	17.1	2.2	3.4	chr14	38205925	38206670	(68837048)	C	L1MB5	LINE/L1	(0)	6174	5438	1153982
16	25.7	1.8	1.7	chr14	38209444	38209500	(68834218)	+	(GGCGGC)n	Simple_repeat	1	58	(0)	1153983
1932	14.8	0.3	0.7	chr14	39177103	39177392	(67866326)	+	AluJb	SINE/Alu	1	289	(23)	1155292
34	29.1	1.4	3.5	chr14	39431953	39431960	(67611758)	+	(CGC)n	Simple_repeat	1	14	(130)	1155722
13	24.6	4.5	2.9	chr14	39431961	39432026	(67611692)	+	(CGCCTGC)n	Simple_repeat	1	69	(0)	1155723
34	29.1	1.4	3.5	chr14	39432027	39432094	(67611624)	+	(CGC)n	Simple_repeat	15	144	(0)	1155722
2533	15.9	11.7	1.2	chr14	39692601	39693097	(67350621)	C	MLT2B4	LTR/ERVL	(0)	556	1	1156047
6846	6.0	0.7	0.7	chr14	39693100	39694181	(67349537)	+	L1PA7	LINE/L1	5070	6150	(4)	1156048
15768	10.4	1.1	2.0	chr14	48257706	48260538	(58783180)	C	HERVH-int	LTR/ERV1	(4721)	2992	1	1166572
244	29.7	4.7	1.0	chr14	49580321	49580422	(57463296)	+	L2	LINE/L2	391	496	(2923)	1168192
820	25.1	7.2	2.2	chr14	49581211	49581310	(57462408)	+	Arthur1B	DNA/hAT-Tip100	132	234	(991)	1168193
540	15.7	13.0	0.7	chr14	49581374	49581508	(57462210)	+	L2	LINE/L2	2412	2565	(854)	1168196
610	22.0	3.3	0.0	chr14	49582152	49582269	(57461449)	+	FLAM_A	SINE/Alu	1	122	(20)	1168201
250	29.6	4.7	0.0	chr14	49582679	49582759	(57460959)	C	MER5A1	DNA/hAT-Charlie	(38)	128	44	1168202
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
23	10.4	0.0	4.4	chr14	50231658	50231702	(56812016)	+	(CGG)n	Simple_repeat	1	45	(0)	1169572
12625	14.5	3.0	5.4	chr14	50569433	50570374	(56473344)	C	L1ME3Cz	LINE/L1	(4395)	1988	1057	1170170
17218	7.8	1.0	0.5	chr14	53117176	53119403	(53924315)	+	L1PA8	LINE/L1	5	2228	(3956)	1174071
9955	12.4	2.4	7.7	chr14	53216383	53218049	(53825669)	C	LTR12C	LTR/ERV1	(0)	1579	3	1174241
4265	18.7	3.9	4.3	chr14	55936676	55936987	(51106731)	C	MER21B	LTR/ERVL	(554)	314	1	1178549
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
13	24.5	4.2	0.0	chr14	63727615	63727662	(43316056)	+	(GCGGC)n	Simple_repeat	1	50	(0)	1189891
185	33.3	2.8	1.9	chr14	64388786	64388892	(42654826)	C	MIR3	SINE/MIR	(35)	173	66	1191200
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
198	34.3	2.9	4.7	chr14	68786803	68786909	(38256809)	C	L3	LINE/CR1	(87)	4012	3908	1198270
356	33.4	7.5	6.9	chr14	68797592	68797824	(38245894)	+	L2b	LINE/L2	3007	3245	(142)	1198277
2221	11.2	1.0	0.0	chr14	69012037	69012330	(38031388)	C	AluSz	SINE/Alu	(13)	299	3	1198686
2275	14.4	3.2	9.9	chr14	69012331	69012661	(38031057)	+	MLT2C2	LTR/ERVL	97	527	(40)	1198685
8247	7.9	15.5	14.6	chr14	70254544	70254943	(36788775)	+	LTR12C	LTR/ERV1	4	445	(1134)	1200924
19	3.9	0.0	0.0	chr14	73714419	73714445	(33329273)	+	(CCGCC)n	Simple_repeat	1	27	(0)	1206931
2305	7.4	4.5	0.3	chr14	75293621	75293946	(31749772)	+	AluSx	SINE/Alu	1	312	(0)	1210139
871	22.2	3.4	0.5	chr14	75660360	75660558	(31383160)	+	MIRb	SINE/MIR	43	247	(21)	1210878
15	16.4	2.9	0.0	chr14	75660791	75660824	(31382894)	+	(CAG)n	Simple_repeat	1	35	(0)	1210879
877	24.9	12.8	4.6	chr14	77970497	77970862	(29072856)	C	L2c	LINE/L2	(498)	2921	2522	1215378
566	8.0	9.3	0.0	chr14	77970871	77970958	(29072760)	C	MLT2B2	LTR/ERVL	(417)	98	2	1215382
16	9.6	2.7	5.3	chr14	81220663	81220699	(25823019)	+	GA-rich	Low_complexity	1	38	(0)	1220300
14	17.1	7.1	3.3	chr14	81220829	81220884	(25822834)	+	(CCGCTG)n	Simple_repeat	1	60	(0)	1220301
18	7.7	0.0	0.0	chr14	81220926	81220953	(25822765)	+	(GCC)n	Simple_repeat	1	28	(0)	1220302
525	6.8	1.4	0.0	chr14	88808415	88808487	(18235231)	+	MLT2B1	LTR/ERVL	1	74	(441)	1230992
411	10.9	0.2	0.0	chr14	88808548	88808611	(18235107)	C	MLT2B2	LTR/ERVL	(489)	65	1	1230993
415	18.4	0.3	0.0	chr14	88808640	88808725	(18234993)	+	MLT2B1	LTR/ERVL	79	165	(436)	1230992
2002	9.7	0.7	0.0	chr14	89147603	89147871	(17895847)	C	MSTA	LTR/ERVL-MaLR	(1)	427	157	1231608
374	2.1	2.0	0.0	chr14	89147879	89147926	(17895792)	+	MADE1	DNA/TcMar-Mariner	31	79	(1)	1231609
2200	15.8	17.5	0.5	chr14	89147934	89148322	(17895396)	+	MLT2B2	LTR/ERVL	1	476	(39)	1231610
20	27.5	0.0	3.0	chr14	92748493	92748559	(14295159)	+	(GGC)n	Simple_repeat	1	67	(0)	1238154
16	20.1	0.0	5.9	chr14	95157310	95157360	(11886358)	+	(GCC)n	Simple_repeat	1	51	(0)	1242512
10070	12.6	6.5	0.5	chr14	95941384	95942914	(11100804)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	1243978
2953	14.2	4.1	9.0	chr14	95988621	95989093	(11054625)	+	MLT2B2	LTR/ERVL	1	469	(46)	1244059
12	18.0	0.0	7.0	chr14	96363020	96363062	(10680656)	+	(CGGCTC)n	Simple_repeat	1	43	(0)	1244738
1377	17.9	21.1	2.2	chr14	98082864	98083223	(8960495)	+	MLT2B1	LTR/ERVL	10	455	(65)	1247773
1668	20.1	2.2	4.6	chr14	99325296	99325730	(7717988)	C	MLT2B4	LTR/ERVL	(7)	407	1	1249867
21	8.9	1.8	8.6	chr14	100306609	100306665	(6737053)	+	G-rich	Low_complexity	1	58	(0)	1251631
13	24.5	1.9	3.8	chr14	101964805	101964856	(5078862)	+	(GCG)n	Simple_repeat	1	53	(0)	1253967
22	22.7	0.0	1.7	chr14	102319768	102319825	(4723893)	+	(GGC)n	Simple_repeat	1	58	(0)	1254667
16	8.5	0.0	0.0	chr14	102319917	102319941	(4723777)	+	(CGC)n	Simple_repeat	1	25	(0)	1254668
1972	15.6	5.2	6.8	chr14	103345006	103345333	(3698385)	+	MER65A	LTR/ERV1	1	320	(125)	1256600
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
1061	14.5	4.6	0.6	chr14	103428036	103428202	(3615516)	C	MER41-int	LTR/ERV1	(0)	5946	5773	1256813
23	27.9	0.0	2.5	chr14	103715302	103715382	(3328336)	+	(CCCGCC)n	Simple_repeat	1	81	(0)	1257364
1323	16.4	5.7	3.0	chr14	104818239	104818580	(2225138)	C	MLT2B2	LTR/ERVL	(98)	464	4	1258858
560	28.2	6.3	1.8	chr14	104818581	104818807	(2224911)	+	MLT1C	LTR/ERVL-MaLR	212	449	(18)	1258859
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
1567	15.8	5.8	6.3	chr15	37233108	37233477	(64757712)	C	MLT2B4	LTR/ERVL	(68)	488	1	1286687
12	20.8	0.0	2.9	chr15	38252257	38252291	(63738898)	+	(GGC)n	Simple_repeat	1	35	(0)	1288014
13029	9.9	0.5	1.4	chr15	39013656	39015215	(62975974)	+	HERVK22-int	LTR/ERVK	2327	3878	(2959)	1289136
18	17.2	4.7	4.5	chr15	40441291	40441354	(61549835)	+	GA-rich	Low_complexity	1	67	(0)	1291195
13	0.0	5.0	0.0	chr15	40441422	40441441	(61549748)	+	(GGAC)n	Simple_repeat	1	21	(0)	1291196
18	25.6	4.9	2.3	chr15	40441570	40441651	(61549538)	+	(CGG)n	Simple_repeat	1	86	(0)	1291197
203	32.3	2.5	1.7	chr15	40859381	40859485	(61131704)	C	L2a	LINE/L2	(56)	3370	3243	1292081
493	29.6	16.6	8.2	chr15	40957969	40958296	(61032893)	C	L2b	LINE/L2	(3)	3384	3024	1292251
14	20.2	0.0	0.0	chr15	41774508	41774541	(60216648)	+	(CTGCCG)n	Simple_repeat	1	34	(0)	1294072
17	17.4	3.0	7.2	chr15	41972413	41972419	(60018770)	+	(GCCC)n	Simple_repeat	1	20	(49)	1294334
14	22.1	4.3	0.0	chr15	41972420	41972466	(60018723)	+	(CGTCCG)n	Simple_repeat	1	49	(0)	1294335
17	17.4	3.0	7.2	chr15	41972467	41972479	(60018710)	+	(GCCC)n	Simple_repeat	21	69	(0)	1294334
270	26.4	3.2	2.1	chr15	43800976	43801068	(58190121)	C	L1ME5	LINE/L1	(16)	6178	6085	1297651
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
15	6.7	2.9	5.6	chr15	50686809	50686843	(51304346)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1308295
12	14.1	3.0	2.9	chr15	56733745	56733777	(45257412)	+	(GCCAGG)n	Simple_repeat	1	34	(0)	1317506
2257	20.3	6.3	3.2	chr15	57557419	57557921	(44433268)	+	MLT2B1	LTR/ERVL	1	520	(0)	1318855
470	25.8	13.5	0.6	chr15	60805426	60805637	(41185552)	+	MIR	SINE/MIR	17	256	(6)	1324345
284	35.2	9.6	1.4	chr15	60805718	60805861	(41185328)	+	MIR3	SINE/MIR	29	185	(23)	1324346
29	26.1	0.0	0.0	chr15	62345014	62345019	(39646170)	+	(CA)n	Simple_repeat	1	13	(75)	1326731
17	36.5	0.0	0.0	chr15	62345020	62345073	(39646116)	+	(GC)n	Simple_repeat	1	54	(0)	1326732
29	26.1	0.0	0.0	chr15	62345074	62345101	(39646088)	+	(CA)n	Simple_repeat	14	88	(0)	1326731
1182	18.9	17.3	2.4	chr15	63045996	63046288	(38944901)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	3	1327873
701	21.5	4.7	0.0	chr15	63046757	63046919	(38944270)	+	MER5B	DNA/hAT-Charlie	2	172	(6)	1327874
2169	12.9	1.0	0.3	chr15	64686527	64686829	(37304360)	+	AluSx1	SINE/Alu	2	306	(6)	1330969
12	24.5	0.0	2.4	chr15	64702915	64702955	(37288234)	+	G-rich	Low_complexity	1	41	(0)	1330987
234	31.2	6.6	3.8	chr15	64842199	64842378	(37148811)	C	MIRb	SINE/MIR	(39)	229	39	1331339
40	6.6	1.4	4.3	chr15	64842391	64842459	(37148730)	+	(TG)n	Simple_repeat	1	70	(0)	1331340
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
638	4.0	0.0	0.0	chr15	65869059	65869133	(36122056)	C	tRNA-Gln-CAG	tRNA	(0)	75	1	1333537
12	3.1	4.8	11.4	chr15	66622314	66622326	(35368863)	+	(GCCGG)n	Simple_repeat	1	13	(0)	1335101
318	22.5	7.0	1.2	chr15	69456365	69456445	(32534744)	+	L1M5	LINE/L1	5626	5711	(532)	1340246
212	9.1	2.9	0.0	chr15	74214545	74214577	(27776612)	+	MIRc	SINE/MIR	115	148	(120)	1348455
234	16.3	2.3	0.0	chr15	74598401	74598443	(27392746)	C	MLT1K	LTR/ERVL-MaLR	(417)	178	135	1349162
261	33.3	9.4	0.7	chr15	74907212	74907356	(27083833)	C	MIRb	SINE/MIR	(88)	180	22	1349733
11	24.5	2.2	2.2	chr15	76335297	76335341	(25655848)	+	(GGCCTC)n	Simple_repeat	1	46	(0)	1352418
14	4.0	7.7	0.0	chr15	77420098	77420123	(24571066)	+	(ACTA)n	Simple_repeat	1	28	(0)	1354018
30	26.2	1.9	1.9	chr15	77420146	77420248	(24570941)	+	(CGCC)n	Simple_repeat	1	105	(0)	1354019
694	12.7	26.2	0.5	chr15	79897436	79897625	(22093564)	C	Tigger3c	DNA/TcMar-Tigger	(2)	600	345	1358559
16	4.5	0.0	0.0	chr15	80989715	80989737	(21001452)	+	(AGC)n	Simple_repeat	1	23	(0)	1360490
1360	21.5	2.1	1.7	chr15	82535779	82536066	(19455123)	C	AluJr	SINE/Alu	(20)	292	4	1363023
208	29.7	8.6	0.0	chr15	82536338	82536401	(19454788)	C	L2b	LINE/L2	(3)	3372	3303	1363024
20	28.8	4.4	2.5	chr15	88639010	88639123	(13352066)	+	(GCAGCG)n	Simple_repeat	1	119	(0)	1372728
15	18.3	0.0	2.6	chr15	88895325	88895363	(13095826)	+	(CCCTGC)n	Simple_repeat	1	39	(0)	1373212
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
199	31.2	1.4	0.5	chr15	90956572	90956660	(11034529)	C	MIRc	SINE/MIR	(92)	170	83	1377409
35	6.8	0.0	0.0	chr15	99733363	99733408	(2257781)	+	(CCGCGAC)n	Simple_repeat	1	46	(0)	1390511
23	7.1	6.5	2.0	chr15	101277420	101277465	(713724)	+	(CCG)n	Simple_repeat	1	49	(0)	1392581
13	29.9	1.9	6.7	chr16	73154	73256	(90265089)	+	(CATGCA)n	Simple_repeat	1	105	(0)	1394139
22	9.0	6.1	1.9	chr16	675675	675723	(89662622)	+	(GCGGA)n	Simple_repeat	1	52	(0)	1395070
226	26.7	16.6	2.0	chr16	886098	886246	(89452099)	C	MIRb	SINE/MIR	(60)	208	34	1395313
1945	10.3	4.0	0.0	chr16	1963336	1963598	(88374747)	+	AluSx3	SINE/Alu	1	274	(37)	1396720
27	13.7	0.0	0.0	chr16	1964480	1964527	(88373818)	+	(CCCCGG)n	Simple_repeat	1	48	(0)	1396721
11	9.5	11.8	0.0	chr16	1992691	1992724	(88345621)	+	(GCGCACG)n	Simple_repeat	1	38	(0)	1396754
17	15.3	2.7	0.0	chr16	2251462	2251498	(88086847)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	1397109
257	32.1	14.2	2.5	chr16	2296673	2296870	(88041475)	+	MLT1J	LTR/ERVL-MaLR	43	267	(245)	1397165
25	15.6	3.5	0.0	chr16	4351130	4351186	(85987159)	+	(GGCGCCC)n	Simple_repeat	1	59	(0)	1400992
14	18.9	4.5	2.2	chr16	4371948	4371991	(85966354)	+	(GCC)n	Simple_repeat	1	46	(0)	1401030
21	15.3	6.7	1.6	chr16	4614800	4614859	(85723486)	+	(CGCCTCC)n	Simple_repeat	1	64	(0)	1401530
12	4.3	8.3	0.0	chr16	11256035	11256058	(79082287)	+	(CCCT)n	Simple_repeat	1	26	(0)	1415250
21	30.8	0.0	0.0	chr16	11742653	11742720	(78595625)	+	(GCC)n	Simple_repeat	1	68	(0)	1416395
194	17.5	19.7	1.7	chr16	11797680	11797737	(78540608)	C	MIRb	SINE/MIR	(80)	188	118	1416502
1261	19.0	5.0	8.9	chr16	12910734	12911105	(77427240)	C	MLT2B4	LTR/ERVL	(6)	408	1	1418942
812	19.8	4.3	0.0	chr16	12911119	12911275	(77427070)	+	MER5A1	DNA/hAT-Charlie	2	165	(1)	1418943
12	16.0	0.0	3.3	chr16	13351530	13351559	(76986786)	+	(TCCCC)n	Simple_repeat	1	30	(0)	1419925
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
187	30.8	1.1	4.2	chr16	15601536	15601630	(74736715)	+	L2c	LINE/L2	3034	3125	(262)	1424796
310	29.2	4.6	8.3	chr16	19153993	19154149	(71184196)	+	MLT1K	LTR/ERVL-MaLR	69	219	(376)	1432839
468	32.6	13.2	2.5	chr16	19154191	19154627	(71183718)	C	LTR84a	LTR/ERVL	(61)	696	206	1432840
15	29.0	0.0	4.4	chr16	23510188	23510255	(66828090)	+	(CCCGGC)n	Simple_repeat	1	68	(0)	1442437
23	30.6	1.2	0.0	chr16	23510378	23510461	(66827884)	+	(CCGCCG)n	Simple_repeat	1	85	(0)	1442438
229	19.6	2.1	0.0	chr16	23557030	23557075	(66781270)	+	MIR1_Amn	SINE/MIR	104	150	(80)	1442574
11	19.2	9.1	1.7	chr16	30400368	30400422	(59937923)	+	(CCCGGACA)n	Simple_repeat	1	60	(0)	1457932
930	23.2	5.3	1.7	chr16	30409813	30410049	(59928296)	+	MIR	SINE/MIR	17	262	(0)	1457961
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
2301	6.9	0.3	0.3	chr16	31117090	31117369	(59220976)	+	AluSc	SINE/Alu	1	280	(29)	1459638
1031	15.8	0.7	0.0	chr16	31199714	31199865	(59138480)	+	FRAM	SINE/Alu	1	153	(23)	1459824
20	8.9	2.8	0.0	chr16	31202044	31202079	(59136266)	+	(TGCCC)n	Simple_repeat	1	37	(0)	1459827
18	22.7	4.8	4.5	chr16	53130468	53130551	(37207794)	+	(GGC)n	Simple_repeat	1	88	(0)	1477320
2392	19.1	5.8	1.7	chr16	54228134	54228592	(36109753)	C	MLT2B1	LTR/ERVL	(40)	480	2	1479109
236	28.1	12.3	2.9	chr16	55035277	55035415	(35302930)	+	MIRb	SINE/MIR	96	249	(19)	1480613
232	27.0	13.0	0.0	chr16	56684650	56684749	(33653596)	C	L2b	LINE/L2	(305)	3070	2956	1483544
230	29.0	0.0	0.0	chr16	56684819	56684880	(33653465)	C	MER5B	DNA/hAT-Charlie	(16)	162	101	1483545
358	19.7	10.2	0.8	chr16	57300190	57300285	(33038060)	+	AluJb	SINE/Alu	209	293	(9)	1484767
387	28.4	16.6	1.0	chr16	57462315	57462527	(32875818)	C	L1ME3G	LINE/L1	(344)	580	317	1485115
471	34.8	2.7	1.1	chr16	65224819	65225001	(25113344)	C	MIRb	SINE/MIR	(56)	212	27	1497624
406	23.3	16.6	0.0	chr16	65225102	65225217	(25113128)	+	L2a	LINE/L2	3288	3426	(0)	1497625
340	33.0	9.7	3.7	chr16	65226054	65226295	(25112050)	+	L2	LINE/L2	2483	2740	(679)	1497627
306	35.3	15.3	1.3	chr16	65226382	65226605	(25111740)	C	MIRb	SINE/MIR	(3)	265	5	1497628
260	25.0	0.0	9.5	chr16	65229350	65229433	(25108912)	+	MIRb	SINE/MIR	1	76	(192)	1497631
33	18.1	0.0	0.0	chr16	65229434	65229497	(25108848)	+	(ATG)n	Simple_repeat	1	64	(0)	1497632
1736	24.0	6.3	2.4	chr16	66253422	66253499	(24084846)	C	LTR33A_	LTR/ERVL	(0)	531	440	1499370
2122	21.7	4.9	1.6	chr16	66253500	66253995	(24084350)	+	MLT2B1	LTR/ERVL	5	517	(3)	1499371
15	18.3	7.5	4.2	chr16	66751661	66751727	(23586618)	+	(GCC)n	Simple_repeat	1	72	(0)	1500336
13	28.9	1.4	5.3	chr16	66751777	66751850	(23586495)	+	(GGC)n	Simple_repeat	1	75	(0)	1500337
15	21.6	3.5	3.4	chr16	67150351	67150407	(23187938)	+	(CGCTCG)n	Simple_repeat	1	59	(0)	1501184
17	8.8	5.3	2.5	chr16	67163444	67163481	(23174864)	+	(CTGGAG)n	Simple_repeat	1	40	(0)	1501203
17	17.4	2.6	8.9	chr16	67248938	67249014	(23089331)	+	(GGCGGCC)n	Simple_repeat	1	79	(0)	1501308
15	17.8	2.6	0.0	chr16	67562793	67562830	(22775515)	+	(CGGCGC)n	Simple_repeat	1	39	(0)	1501892
12	25.5	0.0	0.0	chr16	67563295	67563331	(22775014)	+	(CCTG)n	Simple_repeat	1	37	(0)	1501894
12	8.1	3.6	3.5	chr16	68245583	68245610	(22092735)	+	G-rich	Low_complexity	1	29	(0)	1503223
15	8.7	0.0	0.0	chr16	68704586	68704610	(21633735)	+	(AGGG)n	Simple_repeat	1	25	(0)	1504108
15	27.2	0.0	3.5	chr16	68737345	68737401	(21600944)	+	(CCGGC)n	Simple_repeat	1	57	(0)	1504212
13	0.0	0.0	0.0	chr16	68737445	68737461	(21600884)	+	(GCT)n	Simple_repeat	1	17	(0)	1504213
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
562	22.8	5.0	4.5	chr16	70614314	70614492	(19723853)	+	MER5A	DNA/hAT-Charlie	7	186	(3)	1508385
1700	18.4	0.0	0.7	chr16	70615670	70615962	(19722383)	+	AluJb	SINE/Alu	2	292	(20)	1508389
14	23.1	4.7	3.0	chr16	70680128	70680191	(19658154)	+	(GCGCCCC)n	Simple_repeat	1	67	(0)	1508500
23	21.6	0.0	0.0	chr16	71723696	71723749	(18614596)	+	(CTCG)n	Simple_repeat	1	54	(0)	1510238
11	14.8	4.9	4.7	chr16	74813188	74813228	(15525117)	+	G-rich	Low_complexity	1	43	(0)	1515494
2542	21.4	12.3	0.1	chr16	77223203	77223872	(13114473)	+	LTR41	LTR/ERVL	1	763	(5)	1519477
968	12.6	8.4	0.0	chr16	81729303	81729476	(8608869)	C	L1MA6	LINE/L1	(24)	6276	6087	1527880
20	11.7	2.7	0.0	chr16	81729692	81729728	(8608617)	+	(GGA)n	Simple_repeat	1	38	(0)	1527881
425	25.5	2.9	0.0	chr16	83957073	83957174	(6381171)	C	MIR	SINE/MIR	(50)	212	108	1531925
513	26.9	1.4	4.0	chr16	85420997	85421147	(4917198)	+	MIR	SINE/MIR	111	257	(5)	1534801
441	26.5	3.8	0.5	chr16	85728702	85728872	(4609473)	C	MIRb	SINE/MIR	(22)	208	33	1535317
357	26.7	4.1	1.4	chr16	85728880	85729041	(4609304)	C	MER5A	DNA/hAT-Charlie	(0)	166	4	1535318
15	10.2	9.1	2.1	chr16	85799767	85799810	(4538535)	+	(GGCCG)n	Simple_repeat	1	48	(0)	1535469
26	21.1	1.5	1.5	chr16	87392347	87392413	(2945932)	+	(CGC)n	Simple_repeat	1	68	(0)	1538356
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
2369	6.2	0.0	1.9	chr16	89465701	89466009	(872336)	C	AluY	SINE/Alu	(8)	303	1	1541303
12	8.0	0.0	9.4	chr16	89686931	89686962	(651383)	+	G-rich	Low_complexity	1	32	(0)	1541680
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
16	10.0	4.0	7.7	chr16	89923322	89923398	(414947)	+	(GCCC)n	Simple_repeat	1	74	(0)	1542086
12	14.2	2.2	8.5	chr16	89923510	89923555	(414790)	+	(GCCCCGC)n	Simple_repeat	1	47	(0)	1542087
2298	8.9	1.0	1.0	chr17	879255	879269	(82378172)	C	AluSx1	SINE/Alu	(10)	302	290	1545955
28	3.3	0.0	0.0	chr17	879270	879300	(82378141)	+	(TTTGGTT)n	Simple_repeat	1	31	(0)	1545956
2298	8.9	1.0	1.0	chr17	879301	879586	(82377855)	C	AluSx1	SINE/Alu	(23)	289	1	1545955
2486	7.2	0.0	0.0	chr17	1486512	1486815	(81770626)	C	AluSx	SINE/Alu	(8)	304	1	1547233
13	11.2	3.3	0.0	chr17	1486816	1486828	(81770613)	+	(CCTC)n	Simple_repeat	2	14	(0)	1547234
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
15	28.6	3.2	0.0	chr17	4143605	4143668	(79113773)	+	(GAGCGA)n	Simple_repeat	1	66	(0)	1552424
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
11	30.5	0.0	2.0	chr17	4949901	4949950	(78307491)	+	(CGCCCCC)n	Simple_repeat	1	50	(0)	1554115
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
195	31.5	6.1	1.1	chr17	7015221	7015313	(76242128)	+	L2c	LINE/L2	3290	3387	(0)	1558090
27	0.0	0.0	0.0	chr17	7440907	7440932	(75816509)	+	(GACA)n	Simple_repeat	1	26	(0)	1558828
13	16.7	2.7	2.6	chr17	7441161	7441197	(75816244)	+	(CTCCCTC)n	Simple_repeat	1	38	(0)	1558829
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
31	28.2	2.5	1.6	chr17	7561967	7562077	(75695364)	+	(GGC)n	Simple_repeat	1	145	(0)	1559082
13	20.8	0.0	0.0	chr17	7562078	7562110	(75695331)	+	(GCGGC)n	Simple_repeat	1	33	(0)	1559083
683	17.7	0.0	8.4	chr17	8079196	8079295	(75178146)	+	MER2B	DNA/TcMar-Tigger	243	336	(0)	1560050
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
226	27.4	0.0	0.0	chr17	8221309	8221359	(75036082)	+	MIRc	SINE/MIR	103	153	(115)	1560358
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
2175	8.4	0.0	0.0	chr17	16453009	16453281	(66804160)	+	AluSx4	SINE/Alu	1	273	(37)	1575011
43	10.0	0.0	0.0	chr17	16453298	16453363	(66804078)	+	(ACACAC)n	Simple_repeat	1	66	(0)	1575012
222	32.1	7.7	2.3	chr17	16453476	16453561	(66803880)	+	MIRc	SINE/MIR	119	209	(59)	1575013
17	0.0	0.0	0.0	chr17	17824589	17824607	(65432834)	+	(AC)n	Simple_repeat	1	19	(0)	1577412
14	19.5	0.0	2.7	chr17	17836882	17836918	(65420523)	+	(CGC)n	Simple_repeat	1	37	(0)	1577445
17	22.4	6.6	2.5	chr17	21042840	21042924	(62214517)	+	(CGG)n	Simple_repeat	1	88	(0)	1583516
29	0.0	0.0	0.0	chr17	21284781	21284807	(61972634)	+	(CGC)n	Simple_repeat	1	27	(0)	1584007
13	15.2	0.0	3.2	chr17	28744082	28744112	(54513329)	+	(CCCG)n	Simple_repeat	1	31	(0)	1589232
447	24.4	5.0	1.6	chr17	28744627	28744791	(54512650)	C	MIRb	SINE/MIR	(49)	219	47	1589233
17	28.6	1.7	0.0	chr17	28745190	28745249	(54512192)	+	(CCTC)n	Simple_repeat	1	61	(0)	1589234
12	26.6	4.1	4.0	chr17	29005984	29006056	(54251385)	+	(CAGCGC)n	Simple_repeat	1	76	(0)	1589755
389	22.7	1.1	0.0	chr17	29149231	29149318	(54108123)	+	L2a	LINE/L2	3338	3426	(0)	1589978
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
18	25.5	1.6	3.1	chr17	30600796	30600859	(52656582)	+	(CCG)n	Simple_repeat	1	65	(0)	1592819
262	19.1	20.9	2.0	chr17	32311492	32311627	(50945814)	+	MIR3	SINE/MIR	7	165	(43)	1596527
727	21.1	3.2	3.2	chr17	32382974	32383129	(50874312)	+	FRAM	SINE/Alu	1	156	(20)	1596670
18	19.1	3.7	7.1	chr17	32486611	32486692	(50770749)	+	(GGCG)n	Simple_repeat	1	85	(0)	1596915
19	25.7	4.0	3.9	chr17	35764050	35764148	(47493293)	+	(GGACGA)n	Simple_repeat	1	103	(0)	1602754
284	33.2	18.0	4.3	chr17	35847951	35848526	(47408915)	C	L2	LINE/L2	(341)	3078	2407	1602922
2335	15.5	4.4	15.2	chr17	36072804	36073389	(47184052)	+	MLT2B1	LTR/ERVL	1	520	(0)	1603355
2319	8.4	0.7	0.7	chr17	38846349	38846646	(44410795)	C	AluY	SINE/Alu	(13)	298	1	1608718
986	16.2	5.9	0.0	chr17	38846649	38846808	(44410633)	C	AluJr	SINE/Alu	(14)	298	129	1608719
255	22.2	0.0	1.1	chr17	38846837	38846909	(44410532)	C	7SLRNA	srpRNA	(265)	55	11	1608720
1146	10.0	0.0	0.0	chr17	38847404	38847553	(44409888)	+	AluSq	SINE/Alu	121	270	(43)	1608723
1716	10.7	0.4	0.0	chr17	38847615	38847839	(44409602)	C	AluSx	SINE/Alu	(85)	227	2	1608724
1408	11.0	8.0	4.0	chr17	39205383	39205516	(44051925)	C	AluSx1	SINE/Alu	(27)	285	138	1609541
2699	1.3	0.0	0.7	chr17	39205517	39205843	(44051598)	C	AluYb8	SINE/Alu	(0)	318	1	1609542
1408	11.0	8.0	4.0	chr17	39205844	39205935	(44051506)	C	AluSx1	SINE/Alu	(175)	137	49	1609541
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
24	20.2	2.9	7.4	chr17	40177495	40177599	(43079842)	+	(CGC)n	Simple_repeat	1	108	(0)	1611503
371	23.4	4.1	2.1	chr17	41692484	41692579	(41564862)	+	Tigger3a	DNA/TcMar-Tigger	1	98	(250)	1614057
514	21.3	10.4	4.6	chr17	41693148	41693358	(41564083)	C	MSTD	LTR/ERVL-MaLR	(30)	435	81	1614060
1381	14.8	10.3	4.6	chr17	41693359	41693641	(41563800)	+	AluJb	SINE/Alu	1	301	(11)	1614061
13	15.8	2.7	2.6	chr17	42276584	42276620	(40980821)	+	(GGTGCC)n	Simple_repeat	1	38	(0)	1615286
1631	13.3	2.7	3.0	chr17	42578227	42578526	(40678915)	+	AluJo	SINE/Alu	1	299	(13)	1615918
2145	10.6	2.1	0.0	chr17	43000773	43001054	(40256387)	+	AluSq2	SINE/Alu	1	288	(25)	1616850
815	9.6	0.0	0.0	chr17	43001062	43001165	(40256276)	+	AluY	SINE/Alu	1	104	(207)	1616851
342	8.0	0.0	2.0	chr17	43001167	43001217	(40256224)	C	SVA_D	Retroposon/SVA	(991)	395	346	1616852
21	16.6	2.1	0.0	chr17	43212264	43212310	(40045131)	+	(CCCAG)n	Simple_repeat	1	48	(0)	1617318
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
17	13.4	0.0	2.9	chr17	44066597	44066631	(39190810)	+	(GCG)n	Simple_repeat	1	35	(0)	1619168
12	19.6	2.9	0.0	chr17	44123383	44123417	(39134024)	+	(GGAGCGC)n	Simple_repeat	1	36	(0)	1619259
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
16	21.3	0.0	2.2	chr17	44199432	44199476	(39057965)	+	(CCCCGCC)n	Simple_repeat	1	45	(0)	1619431
22	26.2	1.5	0.0	chr17	44199477	44199487	(39057954)	+	(CCCCGC)n	Simple_repeat	33	69	(0)	1619430
16	8.5	0.0	0.0	chr17	44199548	44199572	(39057869)	+	(CGG)n	Simple_repeat	1	25	(0)	1619432
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
213	29.0	7.4	1.0	chr17	46841784	46841884	(36415557)	+	MIR3	SINE/MIR	78	185	(23)	1624821
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
10691	10.8	3.0	3.5	chr17	47268247	47269835	(35987606)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1625697
229	29.3	0.0	0.0	chr17	48024509	48024566	(35232875)	+	MIRb	SINE/MIR	120	177	(91)	1627148
1815	15.4	4.8	0.7	chr17	50297729	50298027	(32959414)	+	AluJo	SINE/Alu	1	312	(0)	1631493
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
2077	11.9	0.0	0.0	chr17	59842843	59843145	(23414296)	C	AluSx1	SINE/Alu	(0)	312	5	1648069
2164	11.4	5.2	3.4	chr17	60490624	60490978	(22766463)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	1649358
10996	10.3	0.2	1.2	chr17	60491746	60492906	(22764535)	+	THE1B-int	LTR/ERVL-MaLR	423	1580	(0)	1649358
12	29.6	2.0	0.0	chr17	62478404	62478452	(20778989)	+	(CCGGC)n	Simple_repeat	1	50	(0)	1653079
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
12	18.8	2.6	2.6	chr17	64146158	64146195	(19111246)	+	G-rich	Low_complexity	1	39	(0)	1656000
443	28.6	5.2	1.2	chr17	68020281	68020446	(15236995)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1663343
1361	9.0	0.0	5.0	chr17	68047300	68047500	(15209941)	+	AluSx3	SINE/Alu	99	289	(22)	1663402
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
13	19.1	0.0	0.0	chr17	68292140	68292169	(14965272)	+	(GCA)n	Simple_repeat	1	30	(0)	1663905
2039	11.8	0.0	5.4	chr17	68425207	68425520	(14831921)	C	AluJo	SINE/Alu	(15)	297	1	1664180
1830	21.5	4.8	8.4	chr17	71375652	71376175	(11881266)	C	MLT2B2	LTR/ERVL	(11)	504	1	1668690
975	17.9	0.5	1.1	chr17	71376188	71376373	(11881068)	+	MER20	DNA/hAT-Charlie	35	219	(0)	1668691
16	12.8	2.9	0.0	chr17	72592852	72592885	(10664556)	+	G-rich	Low_complexity	1	35	(0)	1670654
272	26.9	5.1	2.1	chr17	72995244	72995338	(10262103)	+	MLT1J1	LTR/ERVL-MaLR	78	175	(269)	1671395
2578	18.6	3.3	0.7	chr17	72995407	72995851	(10261590)	+	MLT2B1	LTR/ERVL	1	457	(63)	1671396
16	13.6	7.3	0.0	chr17	73479320	73479360	(9778081)	+	(GTGCGT)n	Simple_repeat	1	44	(0)	1672401
1971	10.8	6.4	0.0	chr17	74204707	74204984	(9052457)	C	AluSx	SINE/Alu	(15)	297	1	1673686
891	20.9	13.8	3.3	chr17	74204985	74205076	(9052365)	C	Tigger5b	DNA/TcMar-Tigger	(370)	102	13	1673685
295	27.8	8.7	2.5	chr17	74210435	74210552	(9046889)	+	MIRb	SINE/MIR	73	198	(70)	1673696
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
2309	9.0	0.0	0.0	chr17	75775945	75776234	(7481207)	+	AluSc	SINE/Alu	2	291	(18)	1676749
24	20.0	5.3	1.2	chr17	75896642	75896717	(7360724)	+	G-rich	Low_complexity	1	80	(0)	1676984
2013	6.7	1.5	2.2	chr17	75905304	75905571	(7351870)	+	AluSc8	SINE/Alu	1	266	(45)	1676998
20	26.2	4.4	4.2	chr17	78353008	78353058	(4904383)	+	(GCGGCC)n	Simple_repeat	23	118	(0)	1681715
14	14.2	3.2	0.0	chr17	78353182	78353212	(4904229)	+	(CGCC)n	Simple_repeat	1	32	(0)	1681717
1380	23.9	10.8	6.9	chr17	80161042	80161432	(3096009)	C	MER66D	LTR/ERV1	(0)	484	80	1684562
1927	10.0	1.5	0.4	chr17	80261737	80261996	(2995445)	+	AluSx	SINE/Alu	1	263	(49)	1684775
2397	6.7	0.0	1.7	chr17	81243966	81244264	(2013177)	+	AluYm1	SINE/Alu	1	294	(17)	1686028
1987	14.0	0.0	0.0	chr17	81507031	81507302	(1750139)	+	AluSx	SINE/Alu	1	272	(40)	1686344
638	10.5	0.0	0.0	chr17	81507303	81507388	(1750053)	C	Alu	SINE/Alu	(224)	87	2	1686345
1957	15.1	1.0	1.3	chr17	81507391	81507694	(1749747)	C	AluJb	SINE/Alu	(5)	307	5	1686346
885	15.9	7.2	1.2	chr17	81507712	81507965	(1749476)	C	L1M4	LINE/L1	(684)	5496	5232	1686347
1112	16.1	1.4	7.1	chr17	81508764	81508797	(1748644)	C	AluJr	SINE/Alu	(190)	122	89	1686348
359	31.8	4.9	0.0	chr17	81508816	81508991	(1748450)	C	L1M5	LINE/L1	(622)	5572	5388	1686351
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
1203	7.5	0.0	0.0	chr17	81711642	81711827	(1545614)	C	AluSx	SINE/Alu	(0)	312	136	1686674
27	21.1	3.2	4.1	chr17	81712270	81712364	(1545077)	+	G-rich	Low_complexity	1	98	(0)	1686675
15	24.0	5.6	2.6	chr17	81868823	81868894	(1388547)	+	(TCCG)n	Simple_repeat	1	76	(0)	1686844
16	14.5	3.1	9.1	chr17	81917970	81917993	(1339448)	+	(GCGG)n	Simple_repeat	1	42	(24)	1686906
14	8.2	0.0	3.6	chr17	81917994	81918021	(1339420)	+	(GGCCG)n	Simple_repeat	1	28	(0)	1686907
16	14.5	3.1	9.1	chr17	81918022	81918033	(1339408)	+	(GCGG)n	Simple_repeat	43	66	(0)	1686906
1640	26.2	12.8	4.7	chr17	82076255	82076887	(1180554)	C	L1MEc	LINE/L1	(5695)	705	45	1687111
21	21.1	0.0	0.0	chr17	82098063	82098111	(1159330)	+	(CCCCGG)n	Simple_repeat	1	49	(0)	1687135
18	19.8	6.9	0.0	chr17	82098746	82098803	(1158638)	+	(CGCGG)n	Simple_repeat	1	62	(0)	1687137
29	18.7	0.0	4.1	chr17	82648451	82648523	(608918)	+	(CGTG)n	Simple_repeat	1	73	(0)	1688030
15669	18.2	3.9	1.2	chr18	1181179	1181900	(79191385)	+	L1MB1	LINE/L1	5331	6081	(729)	1691049
2256	18.8	2.9	0.5	chr18	1181908	1182314	(79190971)	+	MLT2B1	LTR/ERVL	5	421	(99)	1691051
2736	29.8	2.7	2.8	chr18	3296459	3297771	(77075514)	+	L1PB3	LINE/L1	3	1313	(5550)	1694111
15	20.9	1.6	6.3	chr18	9914178	9914239	(70459046)	+	(GCCGCC)n	Simple_repeat	1	63	(0)	1703864
18	9.4	0.0	5.3	chr18	12883964	12884001	(67489284)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1708293
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
2256	11.6	1.0	0.0	chr18	23412038	23412340	(56960945)	+	AluSz	SINE/Alu	1	306	(6)	1716143
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
2475	20.5	3.6	7.7	chr18	26367120	26367694	(54005591)	C	MLT2B3	LTR/ERVL	(3)	551	1	1720799
389	29.1	13.6	1.6	chr18	26367720	26367977	(54005308)	C	L1ME3G	LINE/L1	(423)	501	208	1720800
26	24.3	0.7	8.7	chr18	31498127	31498195	(48875090)	+	G-rich	Low_complexity	1	105	(33)	1727744
17	9.6	8.3	3.9	chr18	31498196	31498243	(48875042)	+	(CGG)n	Simple_repeat	1	52	(0)	1727745
26	24.3	0.7	8.7	chr18	31498244	31498263	(48875022)	+	G-rich	Low_complexity	106	138	(0)	1727744
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
7429	13.3	9.7	1.0	chr18	33863434	33864707	(46508578)	C	THE1D-int	LTR/ERVL-MaLR	(181)	1399	3	1731219
1207	15.7	0.0	0.0	chr18	34006254	34006438	(46366847)	+	MLT2B1	LTR/ERVL	1	185	(335)	1731399
8351	17.4	2.9	0.3	chr18	34006439	34007899	(46365386)	+	ERVL-int	LTR/ERVL	4258	5757	(0)	1731400
28200	2.6	0.1	0.0	chr18	36235135	36241152	(44132133)	C	L1PA3	LINE/L1	(3)	6152	132	1734530
307	21.8	24.7	0.0	chr18	49487954	49488063	(30885222)	+	Tigger4a	DNA/TcMar-Tigger	1	146	(90)	1753635
891	18.0	21.8	0.9	chr18	49488127	49488354	(30884931)	C	AluJr	SINE/Alu	(23)	289	1	1753636
14	26.0	0.0	0.0	chr18	54269571	54269611	(26103674)	+	(GAC)n	Simple_repeat	1	41	(0)	1761009
2185	9.2	0.4	1.8	chr18	54840864	54841145	(25532140)	+	AluSg	SINE/Alu	2	279	(31)	1761845
12	16.6	0.0	0.0	chr18	57586769	57586795	(22786490)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1765779
17	29.4	3.3	2.1	chr18	58863776	58863865	(21509420)	+	G-rich	Low_complexity	1	93	(0)	1768037
16	9.3	0.0	0.0	chr18	59902472	59902494	(20470791)	+	(TG)n	Simple_repeat	1	23	(0)	1769756
7883	16.6	9.2	9.8	chr18	64321725	64322259	(16051026)	C	L1MC1	LINE/L1	(5593)	915	334	1776317
2472	17.2	5.8	6.2	chr18	64322260	64322810	(16050475)	+	MLT2B4	LTR/ERVL	1	549	(7)	1776323
2112	20.5	9.6	3.6	chr18	67066836	67067311	(13305974)	C	MLT2B2	LTR/ERVL	(7)	508	1	1779963
20	14.9	0.0	6.0	chr18	70288985	70289034	(10084251)	+	GA-rich	Low_complexity	1	50	(0)	1784348
10817	9.5	3.7	4.0	chr18	80218116	80219203	(154082)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	497	1796284
13	14.3	3.0	2.9	chr19	1020920	1020952	(57596664)	+	(CCG)n	Simple_repeat	1	34	(0)	1798079
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
247	32.6	0.0	0.0	chr19	1028116	1028201	(57589415)	C	MIRc	SINE/MIR	(140)	128	43	1798103
24	14.8	1.9	1.8	chr19	1275563	1275616	(57342000)	+	(TGCTGC)n	Simple_repeat	1	55	(0)	1798487
350	27.7	4.7	0.0	chr19	1406997	1407097	(57210519)	+	MIR	SINE/MIR	43	148	(114)	1798746
22	10.7	8.0	0.0	chr19	1407283	1407349	(57210267)	+	(CGCA)n	Simple_repeat	1	72	(0)	1798747
3133	10.7	7.0	0.6	chr19	1442428	1442896	(57174720)	+	LTR2C	LTR/ERV1	1	501	(0)	1798785
2034	10.5	0.0	0.0	chr19	1443080	1443345	(57174271)	C	AluSx	SINE/Alu	(15)	297	32	1798786
29	2.6	5.1	0.0	chr19	1592382	1592420	(57025196)	+	(CACG)n	Simple_repeat	1	41	(0)	1799091
15	21.8	0.0	5.7	chr19	1592422	1592474	(57025142)	+	G-rich	Low_complexity	1	53	(0)	1799092
13	21.2	1.8	7.0	chr19	2269498	2269553	(56348063)	+	(GGC)n	Simple_repeat	1	57	(0)	1800444
13	17.7	3.1	0.0	chr19	2328712	2328743	(56288873)	+	(GGC)n	Simple_repeat	1	33	(0)	1800571
15	24.9	3.1	3.0	chr19	2425247	2425311	(56192305)	+	G-rich	Low_complexity	1	67	(0)	1800779
12	12.4	0.0	6.5	chr19	2425324	2425354	(56192262)	+	(CCCG)n	Simple_repeat	1	31	(0)	1800780
20	2.9	5.4	2.6	chr19	2456939	2456997	(56160619)	+	(GCGCC)n	Simple_repeat	1	60	(0)	1800828
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
842	27.7	15.1	4.2	chr19	2983201	2983942	(55633674)	C	L2a	LINE/L2	(2)	3424	2570	1802087
228	27.0	8.6	0.0	chr19	3505734	3505807	(55111809)	+	L2a	LINE/L2	3346	3426	(0)	1803451
474	24.0	2.4	0.0	chr19	3706306	3706426	(54911190)	C	L2a	LINE/L2	(1)	3425	3302	1803824
2104	13.7	0.3	0.0	chr19	3972648	3972940	(54644676)	+	AluSz	SINE/Alu	1	294	(18)	1804463
1509	14.5	8.5	1.1	chr19	3975092	3975353	(54642263)	+	AluSz6	SINE/Alu	7	289	(23)	1804470
1927	14.3	4.0	0.0	chr19	3975364	3975650	(54641966)	+	AluSc	SINE/Alu	1	299	(10)	1804471
1311	27.2	9.3	1.2	chr19	4233349	4233922	(54383694)	+	L2a	LINE/L2	2573	3186	(240)	1805107
330	27.4	6.4	0.8	chr19	5230872	5230989	(53386627)	+	MER63B	DNA/hAT-Blackjack	312	436	(0)	1807417
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
218	28.5	18.8	0.8	chr19	5309367	5309497	(53308119)	C	MIR3	SINE/MIR	(34)	234	69	1807622
817	26.9	3.9	4.1	chr19	5523006	5523478	(53094138)	+	L2b	LINE/L2	2702	3223	(164)	1808235
11	21.0	2.5	2.4	chr19	5687402	5687441	(52930175)	+	G-rich	Low_complexity	1	41	(0)	1808589
183	25.9	6.5	3.3	chr19	8324027	8324086	(50293530)	+	MIR3	SINE/MIR	75	136	(72)	1815018
896	18.1	0.6	1.2	chr19	8324142	8324301	(50293315)	+	AluJo	SINE/Alu	137	295	(17)	1815019
16	21.6	3.1	4.5	chr19	9835271	9835334	(48782282)	+	(GGCGGC)n	Simple_repeat	1	66	(0)	1818235
14	16.4	4.4	4.3	chr19	10296362	10296406	(48321210)	+	(GGC)n	Simple_repeat	1	47	(0)	1819382
23	21.0	2.5	4.9	chr19	10296503	10296581	(48321035)	+	(GGC)n	Simple_repeat	1	81	(0)	1819383
12	22.4	7.7	0.0	chr19	10416972	10417023	(48200593)	+	(GGCGAGG)n	Simple_repeat	1	56	(0)	1819689
245	31.9	2.1	3.2	chr19	10625191	10625284	(47992332)	+	MIR3	SINE/MIR	54	146	(62)	1820298
2110	6.8	4.5	0.4	chr19	11089873	11090150	(47527466)	C	AluSx1	SINE/Alu	(22)	290	1	1821402
14	19.8	0.0	4.5	chr19	11090388	11090431	(47527185)	+	(GCCCCC)n	Simple_repeat	1	44	(0)	1821403
3239	11.1	6.9	8.0	chr19	12450589	12451187	(46166429)	+	LTR14B	LTR/ERVK	17	608	(0)	1824469
13	23.9	0.0	4.2	chr19	12696486	12696533	(45921083)	+	(GGTCTG)n	Simple_repeat	1	48	(0)	1825025
35	28.5	2.0	3.3	chr19	12833941	12833967	(45783649)	+	(CCG)n	Simple_repeat	105	151	(0)	1825326
15	9.9	5.6	5.3	chr19	12983690	12983725	(45633891)	+	(GC)n	Simple_repeat	1	38	(0)	1825706
284	14.3	0.0	2.0	chr19	12983816	12983865	(45633751)	+	MIR1_Amn	SINE/MIR	109	157	(73)	1825707
275	29.4	4.9	6.2	chr19	13152478	13152622	(45464994)	+	MIR	SINE/MIR	113	255	(7)	1825986
194	19.6	1.8	9.7	chr19	13794921	13794982	(44822634)	C	MIRc	SINE/MIR	(146)	122	66	1827823
15	27.9	4.6	0.0	chr19	13817794	13817858	(44799758)	+	(TGGCGC)n	Simple_repeat	1	68	(0)	1827885
18	11.7	2.6	2.5	chr19	13962827	13962865	(44654751)	+	(CTC)n	Simple_repeat	1	40	(0)	1828222
14	18.2	2.6	2.5	chr19	14518366	14518404	(44099212)	+	(CCG)n	Simple_repeat	1	40	(0)	1829698
16	30.9	1.4	1.4	chr19	15380240	15380308	(43237308)	+	(GGC)n	Simple_repeat	1	70	(0)	1831698
17	14.2	0.0	0.0	chr19	15380373	15380403	(43237213)	+	(CCT)n	Simple_repeat	1	31	(0)	1831699
13	25.8	2.2	0.0	chr19	16076660	16076705	(42540911)	+	(AGCGCG)n	Simple_repeat	1	47	(0)	1833071
296	33.3	11.7	0.5	chr19	16077562	16077751	(42539865)	+	MIR	SINE/MIR	32	245	(17)	1833072
246	24.4	19.5	1.0	chr19	17305318	17305428	(41312188)	C	MIR3	SINE/MIR	(102)	166	31	1835989
2042	12.8	1.4	0.0	chr19	17864844	17865133	(40752483)	C	AluSx3	SINE/Alu	(17)	294	1	1837467
1564	18.1	4.9	0.0	chr19	17865327	17865597	(40752019)	+	AluJr	SINE/Alu	12	296	(16)	1837468
266	26.7	12.2	0.0	chr19	17865635	17865735	(40751881)	+	MLT1J	LTR/ERVL-MaLR	253	367	(145)	1837469
305	26.6	10.9	9.2	chr19	18277989	18278069	(40339547)	+	MIRb	SINE/MIR	89	181	(49)	1838519
212	30.8	8.2	3.3	chr19	18278115	18278265	(40339351)	C	MIR3	SINE/MIR	(35)	173	15	1838521
2119	9.1	1.4	0.7	chr19	18278412	18278698	(40338918)	+	AluSz	SINE/Alu	1	289	(23)	1838522
12	25.0	6.3	1.5	chr19	18280608	18280670	(40336946)	+	(TGCGCT)n	Simple_repeat	1	67	(0)	1838527
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
255	0.0	0.0	0.0	chr19	18288250	18288280	(40329336)	C	MIR	SINE/MIR	(119)	143	113	1838544
196	15.6	0.0	0.0	chr19	18340441	18340472	(40277144)	C	MIR1_Amn	SINE/MIR	(76)	154	123	1838667
13	27.5	2.1	0.0	chr19	18433954	18434001	(40183615)	+	(CCTCTC)n	Simple_repeat	1	49	(0)	1838884
12	19.9	2.3	4.4	chr19	18919177	18919220	(39698396)	+	(CCTCCG)n	Simple_repeat	1	45	(0)	1839829
569	29.8	6.3	0.7	chr19	19116020	19116303	(39501313)	+	LTR16C	LTR/ERVL	179	479	(10)	1840286
2018	9.3	0.4	0.0	chr19	19866502	19866758	(38750858)	C	AluSp	SINE/Alu	(16)	297	40	1841744
960	20.3	4.7	6.6	chr19	19866759	19867018	(38750598)	C	LTR10B1	LTR/ERV1	(138)	409	1	1841743
2073	12.5	1.4	0.0	chr19	20423481	20423768	(38193848)	C	AluSg	SINE/Alu	(18)	292	1	1842623
466	26.3	3.2	2.6	chr19	20423773	20423928	(38193688)	C	LTR10B2	LTR/ERV1	(139)	364	208	1842624
496	27.9	9.7	0.0	chr19	29329842	29329981	(29287635)	C	MIRb	SINE/MIR	(27)	241	87	1850089
1891	10.4	3.7	0.0	chr19	33064062	33064321	(25553295)	+	AluJo	SINE/Alu	1	270	(42)	1856077
12	18.0	10.0	0.0	chr19	33302503	33302552	(25315064)	+	(CGCCCG)n	Simple_repeat	1	55	(0)	1856556
4364	6.8	0.9	0.0	chr19	33566783	33567330	(25050286)	C	MER41A	LTR/ERV1	(1)	553	1	1856957
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
222	31.6	11.4	4.1	chr19	33778034	33778155	(24839461)	C	MIR	SINE/MIR	(117)	145	14	1857292
15	4.0	3.6	3.5	chr19	35030408	35030435	(23587181)	+	(CCCT)n	Simple_repeat	1	29	(0)	1859551
38	6.5	0.0	0.0	chr19	35135680	35135727	(23481889)	+	(ATG)n	Simple_repeat	1	48	(0)	1859792
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
25	34.7	0.0	0.0	chr19	38224430	38224568	(20393048)	+	(AC)n	Simple_repeat	1	139	(0)	1866146
21	19.2	5.1	0.0	chr19	38304894	38304952	(20312664)	+	GA-rich	Low_complexity	1	62	(0)	1866351
18	25.9	4.2	2.7	chr19	38647566	38647637	(19969979)	+	(GC)n	Simple_repeat	1	75	(0)	1867185
268	26.3	49.5	0.0	chr19	38684077	38684209	(19933407)	+	MIR	SINE/MIR	60	259	(3)	1867246
2298	11.2	0.0	0.0	chr19	38835041	38835345	(19782271)	C	AluSq2	SINE/Alu	(8)	305	1	1867555
1392	16.2	8.4	3.7	chr19	38835346	38835474	(19782142)	C	AluJb	SINE/Alu	(178)	134	2	1867554
1047	19.2	2.1	0.0	chr19	38835719	38835900	(19781716)	C	AluJb	SINE/Alu	(42)	270	85	1867556
1323	17.1	9.0	1.9	chr19	38835906	38836174	(19781442)	C	AluJb	SINE/Alu	(19)	293	4	1867557
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
1873	10.4	0.7	3.8	chr19	38949398	38949529	(19668087)	C	AluJr	SINE/Alu	(175)	137	5	1867812
638	20.9	8.7	0.7	chr19	38949535	38949682	(19667934)	C	AluSg4	SINE/Alu	(15)	295	135	1867814
2339	10.4	0.7	0.0	chr19	39431743	39432050	(19185566)	+	AluSq2	SINE/Alu	1	310	(3)	1869054
1341	16.1	0.5	0.5	chr19	39432097	39432307	(19185309)	+	AluSz	SINE/Alu	1	211	(101)	1869055
669	17.7	7.5	0.8	chr19	39432616	39432739	(19184877)	+	AluJr	SINE/Alu	1	133	(179)	1869057
1225	13.7	1.1	0.0	chr19	39432744	39432926	(19184690)	+	AluSx1	SINE/Alu	2	186	(126)	1869058
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
17	18.4	2.3	0.0	chr19	40218254	40218296	(18399320)	+	(CGAGCC)n	Simple_repeat	1	44	(0)	1870515
237	33.3	14.5	0.7	chr19	41872940	41873081	(16744535)	C	MIR	SINE/MIR	(85)	177	13	1874092
181	33.0	13.8	0.0	chr19	41873514	41873613	(16744003)	C	MIRb	SINE/MIR	(34)	234	119	1874093
18	16.8	0.0	5.8	chr19	41999336	41999387	(16618229)	+	(TCCCCC)n	Simple_repeat	1	52	(0)	1874338
279	26.7	14.4	1.0	chr19	42280229	42280330	(16337286)	+	MIRb	SINE/MIR	19	136	(132)	1874951
140	23.4	1.2	1.5	chr19	44582590	44582926	(14034690)	+	GA-rich	Low_complexity	1	341	(0)	1879041
23	25.0	2.9	4.7	chr19	44891431	44891533	(13726083)	+	(GCC)n	Simple_repeat	1	106	(0)	1879900
304	28.4	15.6	3.1	chr19	45177869	45178064	(13439552)	C	MIRb	SINE/MIR	(0)	268	44	1880621
18	14.9	0.0	7.7	chr19	45506823	45506874	(13110742)	+	(CCCAC)n	Simple_repeat	1	52	(0)	1881494
11	13.2	5.7	2.7	chr19	45507667	45507701	(13109915)	+	(GAGCCC)n	Simple_repeat	1	37	(0)	1881495
12	26.9	0.0	0.0	chr19	45529173	45529212	(13088404)	+	(CGCCTG)n	Simple_repeat	1	40	(0)	1881545
204	33.0	1.0	7.2	chr19	45717992	45718102	(12899514)	+	L2a	LINE/L2	2780	2883	(536)	1882073
336	31.2	4.6	5.5	chr19	45718160	45718379	(12899237)	C	MIR	SINE/MIR	(38)	230	5	1882074
18	26.5	1.4	2.8	chr19	45792549	45792619	(12824997)	+	(CGGAGG)n	Simple_repeat	1	72	(0)	1882258
1939	24.9	11.6	9.5	chr19	46132077	46133206	(12484410)	C	HERV35I-int	LTR/ERV1	(5736)	1182	26	1882995
3708	12.6	2.2	1.5	chr19	46133207	46133793	(12483823)	C	LTR10C	LTR/ERV1	(0)	591	1	1882995
1105	9.8	0.0	4.3	chr19	46489128	46489291	(12128325)	+	AluJo	SINE/Alu	94	250	(62)	1883810
180	31.9	1.4	10.0	chr19	46489292	46489451	(12128165)	+	L2a	LINE/L2	3132	3277	(149)	1883811
12	22.4	0.0	6.4	chr19	47130933	47130979	(11486637)	+	GA-rich	Low_complexity	1	47	(0)	1885344
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
439	25.1	5.0	5.0	chr19	47427349	47427570	(11190046)	+	LTR33	LTR/ERVL	280	501	(14)	1886141
284	32.2	12.2	5.3	chr19	47427626	47427907	(11189709)	+	L2	LINE/L2	2658	2961	(458)	1886142
777	28.1	1.8	0.0	chr19	48290859	48291079	(10326537)	C	MIR	SINE/MIR	(31)	231	7	1888385
1979	12.4	1.4	0.0	chr19	48492194	48492476	(10125140)	C	AluJr	SINE/Alu	(15)	297	11	1888866
807	23.4	0.9	5.9	chr19	48513223	48513444	(10104172)	C	MIR	SINE/MIR	(13)	249	39	1888913
48	24.7	2.8	5.5	chr19	48646013	48646225	(9971391)	+	(CTCCTCC)n	Simple_repeat	1	219	(0)	1889272
819	11.0	0.0	0.0	chr19	48882278	48882395	(9735221)	+	MER41B	LTR/ERV1	13	130	(504)	1889855
4069	6.2	0.0	0.0	chr19	48882411	48882938	(9734678)	C	LTR10C	LTR/ERV1	(0)	591	64	1889856
388	23.8	0.0	2.4	chr19	48900397	48900652	(9716964)	C	MSR1	Satellite	(0)	249	1	1889899
2460	9.3	0.0	0.0	chr19	49493401	49493712	(9123904)	+	AluSx1	SINE/Alu	1	312	(0)	1891213
1874	14.4	3.6	0.7	chr19	49632693	49632990	(8984626)	+	AluJr	SINE/Alu	1	307	(5)	1891581
590	30.4	17.9	1.4	chr19	49672293	49672856	(8944760)	C	L2c	LINE/L2	(380)	3039	2363	1891654
276	31.4	8.2	3.4	chr19	49684370	49684636	(8932980)	C	L2	LINE/L2	(386)	3033	2753	1891681
2424	10.0	0.0	0.0	chr19	49934281	49934591	(8683025)	+	AluY	SINE/Alu	1	311	(0)	1892239
801	17.9	0.0	0.0	chr19	49934601	49934723	(8682893)	+	AluJo	SINE/Alu	5	127	(185)	1892240
2378	10.2	0.3	0.0	chr19	49934738	49935041	(8682575)	+	AluSq2	SINE/Alu	1	305	(8)	1892241
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
517	29.3	9.1	1.8	chr19	50258789	50259063	(8358553)	+	L2a	LINE/L2	3121	3417	(9)	1893122
2332	11.5	0.0	0.0	chr19	50329985	50330296	(8287320)	+	AluSx1	SINE/Alu	1	312	(0)	1893283
11	16.3	4.3	6.1	chr19	50330651	50330697	(8286919)	+	(GAGGCAGA)n	Simple_repeat	1	49	(0)	1893285
673	14.1	1.2	2.0	chr19	51704496	51705028	(6912588)	+	MSR1	Satellite	1	528	(2)	1896078
2096	12.8	1.0	0.0	chr19	55118037	55118340	(3499276)	C	AluSc	SINE/Alu	(1)	308	2	1903034
1890	16.9	0.0	1.3	chr19	55383096	55383409	(3234207)	+	AluJb	SINE/Alu	3	312	(0)	1903622
1863	16.8	0.7	0.0	chr19	55398718	55398997	(3218619)	C	AluSz	SINE/Alu	(28)	284	3	1903654
856	20.9	0.7	0.0	chr19	55398998	55399150	(3218466)	C	AluJb	SINE/Alu	(22)	290	137	1903655
2207	10.3	0.0	0.0	chr19	55399157	55399466	(3218150)	C	AluSx	SINE/Alu	(0)	312	1	1903656
15	10.4	3.0	2.9	chr19	55675287	55675319	(2942297)	+	(GGC)n	Simple_repeat	1	34	(0)	1904272
12	25.8	0.0	0.0	chr19	55675311	55675347	(2942269)	+	(GCGT)n	Simple_repeat	1	37	(0)	1904273
20	13.8	2.5	0.0	chr19	58396190	58396229	(221387)	+	GA-rich	Low_complexity	1	41	(0)	1909464
13	21.7	4.7	6.7	chr19	58408437	58408521	(209095)	+	(CAACGCC)n	Simple_repeat	1	89	(0)	1909481
907	29.2	6.4	0.7	chr2	902272	902682	(241290847)	C	L1MC4	LINE/L1	(4601)	1614	1179	1911701
925	24.9	13.2	4.6	chr2	902699	903064	(241290465)	+	MLT2D	LTR/ERVL	3	404	(10)	1911702
13	15.3	4.1	5.9	chr2	950865	950913	(241242616)	+	(GGAGCC)n	Simple_repeat	1	51	(0)	1911760
454	22.2	9.0	2.4	chr2	3581156	3581321	(238612208)	C	L1MB2	LINE/L1	(1)	6170	5993	1914690
14	15.4	5.6	0.0	chr2	11830175	11830210	(230363319)	+	(GTGA)n	Simple_repeat	1	38	(0)	1927316
4775	9.9	1.3	0.2	chr2	12083869	12084495	(230109034)	+	MER41B	LTR/ERV1	1	634	(0)	1927744
593	27.9	5.8	0.0	chr2	12415166	12415326	(229778203)	+	MIR	SINE/MIR	77	247	(15)	1928267
1557	20.5	1.9	1.7	chr2	12415377	12415804	(229777725)	+	MLT2B2	LTR/ERVL	8	503	(52)	1928268
9314	13.6	3.8	4.0	chr2	13176775	13178357	(229015172)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	2	1929475
265	23.6	2.1	11.4	chr2	16202937	16203037	(225990492)	C	Arthur1A	DNA/hAT-Tip100	(13)	164	74	1934137
1754	21.1	7.1	0.1	chr2	16203038	16203435	(225990094)	+	MLT2D	LTR/ERVL	1	539	(20)	1934138
1750	26.0	9.1	12.7	chr2	20757016	20757549	(221435980)	+	L1MEg	LINE/L1	15	603	(5481)	1940819
2823	15.9	6.3	0.8	chr2	20757550	20758074	(221435455)	+	MLT2B4	LTR/ERVL	1	556	(0)	1940820
9256	12.1	6.7	4.9	chr2	22581680	22583221	(219610308)	+	THE1C-int	LTR/ERVL-MaLR	9	1580	(0)	1943248
13	18.4	0.0	0.0	chr2	26179185	26179215	(216014314)	+	(CCCCCG)n	Simple_repeat	1	31	(0)	1949491
12	18.9	7.1	0.0	chr2	26184741	26184782	(216008747)	+	(CGCTGG)n	Simple_repeat	1	45	(0)	1949502
16	22.3	4.0	5.1	chr2	27071773	27071847	(215121682)	+	(GGCTGG)n	Simple_repeat	1	78	(0)	1951130
12	22.0	1.9	5.6	chr2	27380532	27380584	(214812945)	+	(CCGGCCT)n	Simple_repeat	1	54	(0)	1951697
14	9.3	0.0	0.0	chr2	27380692	27380714	(214812815)	+	(GCC)n	Simple_repeat	1	23	(0)	1951698
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
13	24.4	0.0	4.3	chr2	38376977	38377023	(203816506)	+	G-rich	Low_complexity	1	47	(0)	1969097
474	25.6	16.8	0.6	chr2	38742764	38742932	(203450597)	+	L1ME4b	LINE/L1	179	380	(512)	1969882
13	16.1	4.4	4.3	chr2	38742972	38743016	(203450513)	+	(GTACA)n	Simple_repeat	1	47	(0)	1969883
1033	11.0	1.9	2.6	chr2	38743033	38743187	(203450342)	C	AluSx	SINE/Alu	(18)	294	141	1969884
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
961	15.2	0.0	0.0	chr2	42401773	42401910	(199791619)	+	AluSx3	SINE/Alu	171	308	(3)	1975477
2303	17.2	15.3	0.9	chr2	42401934	42402373	(199791156)	+	MLT2B2	LTR/ERVL	1	515	(0)	1975478
306	22.2	2.1	5.5	chr2	47369285	47369484	(194824045)	+	LTR41B	LTR/ERVL	252	444	(314)	1983926
1634	14.3	8.9	2.6	chr2	47654244	47654749	(194538780)	C	LTR18B	LTR/ERVL	(27)	587	1	1984479
14	5.0	0.0	0.0	chr2	55617375	55617395	(186576134)	+	(GGC)n	Simple_repeat	1	21	(0)	1996248
613	15.6	6.8	0.0	chr2	61475822	61475930	(180717599)	C	FLAM_C	SINE/Alu	(22)	121	5	2004406
609	19.1	2.1	4.1	chr2	61475932	61476078	(180717451)	C	AluJo	SINE/Alu	(33)	279	136	2004407
403	20.0	0.0	0.0	chr2	61476079	61476143	(180717386)	C	AluJo	SINE/Alu	(110)	202	138	2004408
282	24.1	0.0	11.7	chr2	61476085	61476178	(180717351)	+	SVA_B	Retroposon/SVA	133	215	(1168)	2004409
2102	12.8	1.7	0.3	chr2	61866717	61867012	(180326517)	+	AluSg	SINE/Alu	1	300	(10)	2005355
750	21.9	5.3	0.6	chr2	61867024	61867183	(180326346)	+	FAM	SINE/Alu	2	169	(16)	2005356
370	27.9	6.6	3.2	chr2	63874473	63874661	(178318868)	C	L2b	LINE/L2	(1212)	2207	2012	2008467
188	20.0	4.2	0.0	chr2	63875112	63875156	(178318373)	+	MIRb	SINE/MIR	190	236	(32)	2008483
2335	9.3	0.7	0.0	chr2	63895174	63895462	(178298067)	+	AluSx	SINE/Alu	1	291	(21)	2008505
1167	14.8	0.6	0.0	chr2	63895473	63895654	(178297875)	+	L1MB5	LINE/L1	5983	6165	(9)	2008506
1479	22.1	12.9	4.6	chr2	67337975	67338435	(174855094)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2013938
2692	15.6	0.7	0.5	chr2	67338625	67339055	(174854474)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2013940
16	28.5	4.3	3.1	chr2	67339503	67339596	(174853933)	+	GA-rich	Low_complexity	1	98	(0)	2013942
299	27.7	8.0	0.0	chr2	67341008	67341156	(174852373)	C	MIR3	SINE/MIR	(6)	256	60	2013943
307	31.1	9.5	4.4	chr2	70085548	70085755	(172107774)	+	MIR	SINE/MIR	38	250	(12)	2018347
207	29.5	10.3	0.0	chr2	70089942	70090019	(172103510)	+	MER5A	DNA/hAT-Charlie	18	104	(85)	2018350
12	28.2	1.9	1.9	chr2	70142416	70142468	(172051061)	+	(CCGC)n	Simple_repeat	1	54	(0)	2018486
14	14.1	0.0	3.0	chr2	70302019	70302051	(171891478)	+	(CCGCG)n	Simple_repeat	1	33	(0)	2018832
14	17.8	0.0	6.8	chr2	73255380	73255423	(168938106)	+	(ATAC)n	Simple_repeat	1	44	(0)	2023404
16	15.4	4.4	2.1	chr2	73269389	73269433	(168924096)	+	G-rich	Low_complexity	1	47	(0)	2023422
27	3.4	0.0	0.0	chr2	73269452	73269481	(168924048)	+	(GCG)n	Simple_repeat	1	30	(0)	2023423
356	27.8	2.2	0.0	chr2	74424024	74424113	(167769416)	+	MIR3	SINE/MIR	33	124	(84)	2025372
12	8.8	4.2	0.0	chr2	74529647	74529670	(167663859)	+	(CGC)n	Simple_repeat	1	25	(0)	2025528
14	8.4	0.0	3.7	chr2	74958682	74958708	(167234821)	+	(GGC)n	Simple_repeat	1	27	(0)	2026250
5028	18.4	5.5	0.8	chr2	77094031	77095495	(165098034)	+	L1M2	LINE/L1	4197	5736	(555)	2029185
2735	19.7	2.4	1.6	chr2	81508017	81508562	(160684967)	C	MLT2B4	LTR/ERVL	(6)	550	1	2035136
2104	13.2	0.0	0.7	chr2	81508613	81508908	(160684621)	+	AluSz	SINE/Alu	2	295	(17)	2035137
14	16.8	3.9	5.6	chr2	84970686	84970737	(157222792)	+	(GGCCCA)n	Simple_repeat	1	54	(0)	2039809
13	25.9	3.2	3.1	chr2	84970747	84970809	(157222720)	+	G-rich	Low_complexity	1	65	(0)	2039810
1612	10.5	11.8	0.4	chr2	85546187	85546425	(156647104)	+	AluY	SINE/Alu	21	290	(21)	2041002
1873	11.4	5.2	0.0	chr2	85546437	85546707	(156646822)	+	AluSx1	SINE/Alu	3	288	(24)	2041003
2065	21.9	7.3	0.9	chr2	86401494	86401976	(155791553)	C	MLT2B3	LTR/ERVL	(45)	507	1	2042603
2194	11.0	0.0	3.2	chr2	86402016	86402324	(155791205)	+	AluSz	SINE/Alu	14	312	(0)	2042607
249	26.2	15.1	3.6	chr2	88015989	88016099	(154177430)	+	AluJb	SINE/Alu	118	243	(59)	2045130
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
26	0.0	0.0	0.0	chr2	88627212	88627236	(153566293)	+	(CAG)n	Simple_repeat	1	25	(0)	2046398
25	28.2	2.0	6.0	chr2	96760837	96760984	(145432545)	+	G-rich	Low_complexity	1	151	(0)	2052732
12	25.3	0.0	5.8	chr2	99489632	99489683	(142703846)	+	(GCCGG)n	Simple_repeat	1	52	(0)	2056541
14	28.6	2.6	3.8	chr2	100417614	100417690	(141775839)	+	(CGCC)n	Simple_repeat	1	79	(0)	2057844
198	30.5	9.5	0.0	chr2	101004441	101004535	(141188994)	C	L2b	LINE/L2	(220)	3155	3051	2058837
340	26.1	15.6	3.7	chr2	101004657	101004847	(141188682)	+	MER20	DNA/hAT-Charlie	2	219	(0)	2058838
2161	11.6	1.4	0.0	chr2	101008533	101008824	(141184705)	+	AluSp	SINE/Alu	1	296	(17)	2058842
30	14.0	2.6	5.0	chr2	104853225	104853302	(137340227)	+	GA-rich	Low_complexity	1	80	(0)	2064063
51	3.8	0.0	0.0	chr2	111120967	111121021	(131072508)	+	(CGC)n	Simple_repeat	1	55	(0)	2073128
2343	16.8	3.8	0.7	chr2	117289301	117289713	(124903816)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	2082108
13281	18.8	2.9	2.5	chr2	117289714	117290024	(124903505)	+	L1MA4	LINE/L1	6288	6599	(963)	2082098
28495	2.2	0.1	0.1	chr2	118137001	118143020	(124050509)	C	L1PA2	LINE/L1	(9)	6146	125	2083250
2522	16.0	2.9	13.3	chr2	122180332	122180908	(120012621)	C	MLT2B2	LTR/ERVL	(0)	515	1	2090011
19	15.3	3.0	7.2	chr2	127050192	127050258	(115143271)	+	G-rich	Low_complexity	1	69	(0)	2096811
14	0.0	7.4	3.5	chr2	128027098	128027124	(114166405)	+	(CCGC)n	Simple_repeat	1	29	(0)	2098506
14	24.6	5.1	1.6	chr2	128027166	128027224	(114166305)	+	(CGG)n	Simple_repeat	1	62	(0)	2098507
1801	20.0	1.6	1.9	chr2	128924340	128924719	(113268810)	C	MLT2B4	LTR/ERVL	(189)	367	1	2099858
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
2203	20.4	3.1	8.6	chr2	146366030	146366575	(95826954)	+	MLT2B2	LTR/ERVL	1	515	(0)	2123824
4104	12.7	4.3	6.7	chr2	146412731	146413533	(95779996)	C	LTR1	LTR/ERV1	(0)	783	1	2123885
2598	17.6	5.8	1.7	chr2	155607588	155608120	(86585409)	C	MLT2B4	LTR/ERVL	(0)	556	1	2136376
13	17.2	3.0	0.0	chr2	155608147	155608179	(86585350)	+	(ATGTTT)n	Simple_repeat	1	34	(0)	2136377
2470	23.7	2.0	1.6	chr2	156126568	156126821	(86066708)	+	MLT2B3	LTR/ERVL	117	370	(300)	2137006
15	0.0	0.0	7.4	chr2	163736336	163736362	(78457167)	+	(GGCC)n	Simple_repeat	1	27	(0)	2147386
935	18.1	9.3	4.3	chr2	164420950	164421203	(77772326)	+	L1MA10	LINE/L1	6067	6334	(0)	2148274
205	28.4	4.0	1.0	chr2	164421246	164421341	(77772188)	+	L2c	LINE/L2	2993	3091	(296)	2148275
3202	15.7	0.0	0.4	chr2	167862106	167862622	(74330907)	C	MLT2B1	LTR/ERVL	(5)	515	1	2152717
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
16	22.6	1.8	3.6	chr2	171160827	171160881	(71032648)	+	(CGG)n	Simple_repeat	1	56	(0)	2157912
2079	19.9	7.1	3.4	chr2	175628395	175628894	(66564635)	+	MLT2B1	LTR/ERVL	1	520	(0)	2165038
15	15.1	2.6	2.5	chr2	177213180	177213218	(64980311)	+	G-rich	Low_complexity	1	40	(0)	2167293
1551	17.4	9.9	0.0	chr2	177222526	177222789	(64970740)	+	AluJb	SINE/Alu	1	293	(19)	2167301
2549	7.0	2.3	0.0	chr2	177226791	177227088	(64966441)	C	AluY	SINE/Alu	(6)	305	1	2167305
2442	14.9	12.8	0.9	chr2	177880911	177881318	(64312211)	+	MLT2B2	LTR/ERVL	1	471	(44)	2168225
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
10109	6.5	8.1	3.6	chr2	193501469	193502973	(48690556)	C	LTR12C	LTR/ERV1	(0)	1579	3	2188537
857	7.7	0.8	13.6	chr2	197435318	197435472	(44758057)	+	FRAM	SINE/Alu	22	156	(20)	2194005
13	20.5	0.0	4.7	chr2	201451406	201451448	(40742081)	+	(GCAGCC)n	Simple_repeat	1	43	(0)	2200073
308	30.2	3.5	2.4	chr2	201972508	201972650	(40220879)	C	MIRb	SINE/MIR	(27)	241	92	2200947
24	24.3	1.8	6.3	chr2	202034104	202034219	(40159310)	+	(GCG)n	Simple_repeat	1	110	(0)	2201080
18	14.3	0.0	2.9	chr2	202634738	202634771	(39558758)	+	(AC)n	Simple_repeat	1	34	(0)	2202410
19	17.4	2.1	2.1	chr2	206443376	206443422	(35750107)	+	(GCA)n	Simple_repeat	1	48	(0)	2208642
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
700	16.9	13.4	0.0	chr2	209305598	209305737	(32887792)	C	MSTA	LTR/ERVL-MaLR	(0)	428	267	2212846
4333	18.1	2.9	1.2	chr2	209305738	209306210	(32887319)	C	MER52A	LTR/ERV1	(0)	1755	1280	2212847
4333	19.1	9.8	2.9	chr2	209306971	209307949	(32885580)	C	MER52A	LTR/ERV1	(476)	1279	204	2212847
49	0.0	0.0	0.0	chr2	209319637	209319678	(32873851)	+	(TG)n	Simple_repeat	1	42	(0)	2212859
40	17.0	2.5	0.0	chr2	209319679	209319757	(32873772)	+	GA-rich	Low_complexity	1	81	(0)	2212860
2135	15.5	7.9	0.8	chr2	209322791	209323187	(32870342)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2212868
584	33.2	6.8	4.6	chr2	209323188	209323536	(32869993)	+	L3	LINE/CR1	3630	3990	(109)	2212867
40	30.8	3.0	2.9	chr2	213151759	213151922	(29041607)	+	(CG)n	Simple_repeat	1	165	(0)	2217871
18	22.2	1.9	1.8	chr2	213151960	213152018	(29041511)	+	(CGCC)n	Simple_repeat	1	59	(0)	2217872
4360	16.6	1.9	3.0	chr2	216114477	216115267	(26078262)	+	MER50C	LTR/ERV1	1	782	(0)	2222208
285	18.6	25.9	0.0	chr2	216503188	216503273	(25690256)	+	MIR	SINE/MIR	14	129	(133)	2222860
1718	14.5	3.4	2.7	chr2	216503403	216503698	(25689831)	C	AluSz6	SINE/Alu	(14)	298	1	2222861
12	0.0	3.9	7.4	chr2	216505585	216505610	(25687919)	+	(GGGT)n	Simple_repeat	1	27	(0)	2222866
1909	17.5	0.0	0.0	chr2	216505814	216506121	(25687408)	C	AluJb	SINE/Alu	(2)	310	3	2222867
671	30.6	2.8	1.4	chr2	216506650	216506858	(25686671)	C	LTR101_Mam	LTR/ERVL	(65)	764	553	2222868
681	30.0	2.3	0.0	chr2	216932037	216932246	(25261283)	C	MIR	SINE/MIR	(23)	239	25	2223670
2274	11.8	1.0	0.0	chr2	222659946	222660241	(19533288)	+	AluSz	SINE/Alu	1	299	(13)	2232938
2102	19.3	8.5	3.5	chr2	222660242	222660348	(19533181)	C	MLT2B1	LTR/ERVL	(409)	111	1	2232937
1870	25.7	6.9	2.3	chr2	222660349	222660388	(19533141)	+	L1ME3D	LINE/L1	6085	6123	(119)	2232936
23745	7.2	0.3	0.7	chr2	227544419	227546619	(14646910)	C	L1PA5	LINE/L1	(3978)	2206	5	2240682
3576	14.3	5.8	1.5	chr2	228299817	228300426	(13893103)	C	LTR9B	LTR/ERV1	(0)	644	7	2241895
2274	13.0	0.0	0.0	chr2	231448898	231449205	(10744324)	C	AluSx	SINE/Alu	(4)	308	1	2246891
1842	15.2	0.7	4.8	chr2	231449206	231449348	(10744181)	C	AluJb	SINE/Alu	(168)	144	1	2246890
352	23.4	6.9	2.1	chr2	231450578	231450673	(10742856)	C	L2a	LINE/L2	(19)	3407	3307	2246896
14	16.9	0.0	2.9	chr2	231666540	231666574	(10526955)	+	G-rich	Low_complexity	1	35	(0)	2247403
283	27.0	1.8	0.4	chr2	231715008	231715117	(10478412)	+	MIRc	SINE/MIR	47	156	(74)	2247484
10503	11.3	5.1	0.3	chr2	234696615	234698118	(7495411)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2252388
306	28.8	6.3	13.6	chr2	237642300	237642830	(4550699)	+	L1M3e	LINE/L1	1147	1636	(5394)	2256646
11	20.6	5.1	0.0	chr2	238096819	238096857	(4096672)	+	(AGTGCCG)n	Simple_repeat	1	41	(0)	2257364
294	22.8	3.8	3.8	chr2	238096983	238097087	(4096442)	C	L2b	LINE/L2	(191)	3184	3080	2257365
13	19.3	9.4	0.0	chr2	238239917	238239969	(3953560)	+	G-rich	Low_complexity	1	58	(0)	2257547
542	28.5	3.8	6.6	chr2	240556748	240556797	(1636732)	C	MLT1A	LTR/ERVL-MaLR	(306)	68	15	2260167
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
19	19.0	0.0	6.6	chr2	241701857	241701917	(491612)	+	(GCCCGCC)n	Simple_repeat	1	61	(0)	2261583
2301	6.4	0.3	7.4	chr20	3160066	3160391	(61283776)	+	AluSx	SINE/Alu	3	305	(7)	2268330
3038	19.3	8.9	14.1	chr20	3226031	3226388	(61217779)	+	MER21B	LTR/ERVL	484	868	(0)	2268470
22	16.7	4.8	1.5	chr20	8132567	8132628	(56311539)	+	(CCCGCGC)n	Simple_repeat	1	65	(0)	2276801
3055	15.4	1.3	2.7	chr20	12059411	12059965	(52384202)	+	MLT2B4	LTR/ERVL	4	550	(6)	2282936
342	35.6	5.8	0.7	chr20	12761924	12762070	(51682097)	C	Charlie15a	DNA/hAT-Charlie	(46)	178	24	2283865
226	37.7	6.2	5.2	chr20	12763476	12763668	(51680499)	+	MIRc	SINE/MIR	29	223	(45)	2283867
18	25.3	1.3	5.1	chr20	25390705	25390781	(39053386)	+	(CCG)n	Simple_repeat	1	78	(0)	2302097
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
14	13.4	6.1	0.0	chr20	31573028	31573060	(32871107)	+	GA-rich	Low_complexity	1	35	(0)	2306294
16	21.1	0.0	0.0	chr20	31723838	31723875	(32720292)	+	(GCCT)n	Simple_repeat	1	38	(0)	2306714
25	29.5	0.0	0.0	chr20	32189867	32189944	(32254223)	+	(CCT)n	Simple_repeat	1	78	(0)	2307868
11	30.3	0.0	2.0	chr20	32583176	32583225	(31860942)	+	(GCCGCCC)n	Simple_repeat	1	50	(0)	2308732
12	23.9	0.0	2.4	chr20	32583266	32583306	(31860861)	+	(CCCGCCT)n	Simple_repeat	1	41	(0)	2308733
228	22.2	0.0	14.3	chr20	32665590	32665673	(31778494)	C	MER33	DNA/hAT-Charlie	(0)	324	253	2308957
12	15.9	5.7	0.0	chr20	32762320	32762354	(31681813)	+	G-rich	Low_complexity	1	37	(0)	2309235
12	24.6	0.0	2.5	chr20	32762485	32762524	(31681643)	+	G-rich	Low_complexity	1	40	(0)	2309236
367	32.1	9.3	4.4	chr20	34516788	34516992	(29927175)	C	MIR	SINE/MIR	(9)	253	38	2313240
26	0.0	0.0	0.0	chr20	35277856	35277880	(29166287)	+	(GGCTGG)n	Simple_repeat	1	25	(0)	2314927
1710	12.8	0.8	4.7	chr20	35701327	35701471	(28742696)	C	AluSx3	SINE/Alu	(48)	263	130	2315849
2313	8.5	0.0	0.3	chr20	35701472	35701766	(28742401)	+	AluSc8	SINE/Alu	1	294	(17)	2315850
1710	12.8	0.8	4.7	chr20	35701767	35701894	(28742273)	C	AluSx3	SINE/Alu	(182)	129	1	2315849
1758	13.3	9.1	0.0	chr20	35702654	35702923	(28741244)	+	AluSz	SINE/Alu	1	297	(15)	2315851
688	15.2	0.9	0.0	chr20	35725232	35725343	(28718824)	C	L1PB2	LINE/L1	(6)	6145	6033	2315890
848	12.4	0.0	0.0	chr20	35725468	35725580	(28718587)	C	AluSx	SINE/Alu	(199)	113	1	2315891
38	21.7	0.0	0.0	chr20	37902225	37902301	(26541866)	+	(CA)n	Simple_repeat	1	77	(0)	2321015
545	30.8	6.7	2.6	chr20	37902481	37902710	(26541457)	C	MIRb	SINE/MIR	(18)	250	11	2321016
18	23.8	0.0	2.0	chr20	38926649	38926699	(25517468)	+	(GCG)n	Simple_repeat	1	51	(0)	2323167
31	38.3	0.6	2.9	chr20	40274953	40275124	(24169043)	+	(TG)n	Simple_repeat	1	173	(0)	2325481
4217	8.0	2.5	1.1	chr20	44735461	44736006	(19708161)	C	MER41A	LTR/ERV1	(0)	554	1	2334218
818	19.4	5.6	0.6	chr20	44736027	44736197	(19707970)	C	Zaphod3	DNA/hAT-Tip100	(2443)	180	1	2334219
12	18.3	7.8	1.8	chr20	45817382	45817432	(18626735)	+	(CAGGTCT)n	Simple_repeat	1	55	(0)	2336276
13	32.3	1.6	0.0	chr20	45935022	45935085	(18509082)	+	(CCTCCG)n	Simple_repeat	1	65	(0)	2336592
657	27.9	8.8	2.9	chr20	47317744	47317987	(17126180)	+	MIRb	SINE/MIR	1	260	(8)	2339737
8110	25.2	5.5	3.3	chr20	49281578	49282133	(15162034)	C	HERVIP10B3-int	LTR/ERV1	(0)	7603	7026	2344009
1402	11.8	20.2	0.0	chr20	49282134	49282370	(15161797)	C	AluSg	SINE/Alu	(13)	297	1	2344010
8110	25.2	5.5	3.3	chr20	49282371	49284126	(15160041)	C	HERVIP10B3-int	LTR/ERV1	(578)	7025	5239	2344009
2500	21.9	4.0	6.8	chr20	49286345	49287070	(15157097)	C	HERVIP10B3-int	LTR/ERV1	(6898)	705	1	2344011
1922	19.0	19.2	0.5	chr20	49287071	49287514	(15156653)	C	LTR10B1	LTR/ERV1	(0)	547	1	2344011
951	20.1	8.6	1.6	chr20	49288411	49288604	(15155563)	C	AluJo	SINE/Alu	(19)	293	85	2344013
1591	9.0	6.8	0.9	chr20	49290187	49290409	(15153758)	C	AluSz	SINE/Alu	(75)	237	1	2344017
234	27.9	19.1	0.0	chr20	49290412	49290551	(15153616)	+	MLT1E1A	LTR/ERVL-MaLR	209	381	(179)	2344015
1418	25.0	14.8	4.4	chr20	49290799	49291486	(15152681)	+	L2a	LINE/L2	2432	3218	(208)	2344018
628	29.0	8.4	0.5	chr20	50186032	50186249	(14257918)	+	L2a	LINE/L2	3189	3425	(1)	2346312
285	22.8	5.6	2.9	chr20	50186482	50186569	(14257598)	C	MIR3	SINE/MIR	(1)	207	117	2346314
18	15.0	4.1	3.9	chr20	50190916	50190964	(14253203)	+	(GCA)n	Simple_repeat	1	51	(0)	2346323
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
2441	5.0	0.0	0.3	chr20	53563127	53563434	(10880733)	C	AluY	SINE/Alu	(0)	311	1	2353775
2081	17.3	5.4	1.5	chr20	54246517	54246927	(10197240)	C	MLT2B1	LTR/ERVL	(92)	428	1	2355335
513	22.7	2.7	0.0	chr20	54246928	54247032	(10197135)	+	MER5A1	DNA/hAT-Charlie	15	122	(44)	2355336
2825	6.8	0.0	0.8	chr20	54462171	54462528	(9981639)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2355735
1645	16.7	17.9	1.3	chr20	54462529	54462615	(9981552)	C	MLT2B4	LTR/ERVL	(470)	86	1	2355734
1018	25.4	4.8	1.2	chr20	54462616	54462934	(9981233)	C	LTR16B1	LTR/ERVL	(93)	387	57	2355733
608	24.2	2.1	4.1	chr20	58619898	58620091	(5824076)	C	MIR	SINE/MIR	(13)	249	60	2363250
12	12.1	7.9	2.4	chr20	58693119	58693156	(5751011)	+	(CCCG)n	Simple_repeat	1	41	(0)	2363348
17	19.2	7.3	1.7	chr20	58981450	58981504	(5462663)	+	(CG)n	Simple_repeat	1	59	(0)	2363762
249	30.0	9.1	0.9	chr20	60589810	60589920	(3854247)	C	LTR89	LTR/ERVL?	(486)	393	273	2366182
334	29.8	3.4	0.0	chr20	61436935	61437048	(3007119)	+	L2b	LINE/L2	3242	3359	(16)	2367375
17	24.5	1.6	3.2	chr20	62122132	62122192	(2321975)	+	(CCGC)n	Simple_repeat	1	62	(0)	2368176
32	3.0	0.0	0.0	chr20	63895148	63895181	(548986)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	2370196
18	13.7	0.0	0.0	chr20	63895184	63895215	(548952)	+	(CCG)n	Simple_repeat	1	32	(0)	2370197
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
504	17.2	0.0	1.1	chr21	17454673	17454759	(29255224)	C	AluSp	SINE/Alu	(13)	300	215	2381627
40	25.2	1.6	1.6	chr21	20998254	20998374	(25711609)	+	(CGC)n	Simple_repeat	1	123	(0)	2386432
36592	15.4	2.4	2.0	chr21	23963718	23969659	(22740324)	C	HERVL18-int	LTR/ERVL	(0)	6047	82	2390441
1390	18.5	17.7	9.1	chr21	28575151	28575590	(18134393)	C	MLT2B1	LTR/ERVL	(34)	486	1	2396945
3124	22.8	6.5	2.2	chr21	28575613	28576707	(18133276)	C	L1ME2	LINE/L1	(0)	6164	5016	2396946
12	15.7	2.6	5.0	chr21	31732235	31732273	(14977710)	+	G-rich	Low_complexity	1	40	(0)	2401954
19	15.1	4.5	0.0	chr21	31732278	31732321	(14977662)	+	(CGG)n	Simple_repeat	1	46	(0)	2401955
2323	16.3	15.1	1.1	chr21	32915812	32916288	(13793695)	C	MLT2B4	LTR/ERVL	(0)	556	1	2403991
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
43	16.6	5.4	5.1	chr21	34073379	34073527	(12636456)	+	(GGCGG)n	Simple_repeat	1	157	(0)	2406106
16	22.1	2.1	0.0	chr21	36385368	36385414	(10324569)	+	(GCGCGGC)n	Simple_repeat	1	48	(0)	2409764
699	28.9	7.8	1.5	chr21	36472161	36472424	(10237559)	C	L2	LINE/L2	(662)	2757	2476	2409955
1360	24.8	10.9	3.7	chr21	36472426	36472616	(10237367)	+	MLT2B4	LTR/ERVL	1	205	(351)	2409956
1457	22.5	7.2	0.9	chr21	36472617	36472966	(10237017)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2409957
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
1814	14.6	4.1	0.0	chr21	39341275	39341555	(7368428)	C	AluSq2	SINE/Alu	(20)	293	1	2414400
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
1805	12.8	1.1	0.0	chr21	39349731	39349988	(7359995)	C	AluJb	SINE/Alu	(22)	290	30	2414412
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
21	5.6	5.4	0.0	chr21	43789349	43789385	(2920598)	+	(CGCAGG)n	Simple_repeat	1	39	(0)	2420812
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
235	22.1	3.4	5.5	chr21	46323663	46323753	(386230)	+	LTR16A	LTR/ERVL	135	223	(228)	2423811
23	14.0	2.8	6.8	chr22	19178623	19178694	(31639774)	+	G-rich	Low_complexity	1	74	(0)	2431573
24	19.6	1.7	1.6	chr22	19962545	19962628	(30855840)	+	(CTG)n	Simple_repeat	1	84	(0)	2432755
15	17.2	2.0	5.8	chr22	21735618	21735668	(29082800)	+	(CGCCCCG)n	Simple_repeat	1	52	(0)	2435785
20	8.8	0.0	5.0	chr22	21736077	21736116	(29082352)	+	(GGGGC)n	Simple_repeat	1	40	(0)	2435787
33	28.0	2.7	3.3	chr22	21867413	21867558	(28950910)	+	(CCG)n	Simple_repeat	1	150	(0)	2436079
269	23.7	0.0	3.8	chr22	26836067	26836145	(23982323)	+	MIRb	SINE/MIR	119	194	(74)	2445284
226	27.1	21.9	0.0	chr22	26836210	26836419	(23982049)	+	L2a	LINE/L2	2977	3245	(181)	2445285
1375	20.0	5.9	5.6	chr22	28031712	28032124	(22786344)	+	MLT2B4	LTR/ERVL	163	664	(53)	2447888
25	27.8	3.2	5.5	chr22	28679779	28679936	(22138532)	+	(CGCGCCC)n	Simple_repeat	1	163	(0)	2448922
409	27.3	0.0	6.0	chr22	31754208	31754324	(19064144)	+	MIR3	SINE/MIR	37	146	(62)	2455539
15	14.5	3.9	5.7	chr22	32801692	32801742	(18016726)	+	(CAGGCGG)n	Simple_repeat	1	53	(0)	2457743
18	17.7	0.0	0.0	chr22	32801742	32801779	(18016689)	+	(CTC)n	Simple_repeat	1	38	(0)	2457744
1911	17.6	6.5	1.9	chr22	33683110	33683519	(17134949)	+	MLT2B4	LTR/ERVL	25	424	(40)	2459559
2148	11.0	0.4	0.0	chr22	33822423	33822739	(16995729)	+	AluSx1	SINE/Alu	7	312	(0)	2459848
2233	18.3	11.0	1.7	chr22	35634879	35635346	(15183122)	C	MLT2B1	LTR/ERVL	(3)	517	1	2463488
646	22.5	2.4	12.9	chr22	35635347	35635580	(15182888)	C	L2a	LINE/L2	(31)	3395	3172	2463486
271	32.4	17.5	0.6	chr22	36327960	36328139	(14490329)	+	MIRb	SINE/MIR	35	251	(17)	2464772
13	26.5	0.0	7.3	chr22	36329918	36329985	(14488483)	+	(CACAAG)n	Simple_repeat	1	68	(0)	2464774
13	15.9	0.0	0.0	chr22	36481469	36481496	(14336972)	+	(CCGC)n	Simple_repeat	1	28	(0)	2465156
423	24.1	10.7	0.0	chr22	37745609	37745752	(13072716)	+	MIRb	SINE/MIR	20	192	(76)	2467967
15	11.7	0.0	0.0	chr22	38505819	38505846	(12312622)	+	(CTCGC)n	Simple_repeat	1	28	(0)	2469636
264	27.1	1.4	0.0	chr22	39098073	39098142	(11720326)	+	MIR	SINE/MIR	77	147	(115)	2470871
734	12.1	6.6	1.7	chr22	39098237	39098352	(11720116)	C	AluYc	SINE/Alu	(6)	293	172	2470872
784	16.7	0.0	2.9	chr22	39098353	39098490	(11719978)	+	AluJr	SINE/Alu	1	134	(178)	2470873
1806	13.5	4.5	1.8	chr22	39310120	39310401	(11508067)	C	AluJb	SINE/Alu	(21)	291	2	2471354
2327	5.4	0.4	0.4	chr22	39311316	39311595	(11506873)	C	AluYc	SINE/Alu	(19)	280	1	2471356
209	24.2	3.2	10.8	chr22	39524504	39524605	(11293863)	C	MIR3	SINE/MIR	(13)	195	102	2471821
316	27.2	13.6	1.5	chr22	39524718	39524973	(11293495)	+	L2a	LINE/L2	2932	3393	(33)	2471822
17	16.6	6.4	0.0	chr22	41926171	41926217	(8892251)	+	(CACCAG)n	Simple_repeat	1	50	(0)	2477065
1486	29.8	3.3	7.4	chr22	42461966	42462814	(8355654)	+	L1MEd	LINE/L1	58	870	(6233)	2478110
297	28.0	12.0	6.0	chr22	42508702	42508834	(8309634)	C	MLT1J1	LTR/ERVL-MaLR	(279)	165	24	2478245
8235	5.6	2.0	0.0	chr22	42551535	42552521	(8265947)	C	LTR13	LTR/ERVK	(0)	1007	1	2478356
1075	22.0	13.7	3.7	chr22	43187850	43188009	(7630459)	C	BLACKJACK	DNA/hAT-Blackjack	(740)	2229	2079	2479780
275	24.2	0.0	1.5	chr22	43822835	43822901	(6995567)	+	Charlie18a	DNA/hAT-Charlie	277	342	(0)	2480837
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
1778	20.1	14.5	0.5	chr22	44101965	44102408	(6716060)	C	MLT2B1	LTR/ERVL	(3)	517	1	2481364
353	28.2	2.2	5.1	chr22	44102409	44102421	(6716047)	C	Charlie26a	DNA/hAT-Charlie	(244)	81	70	2481363
23	5.8	2.8	0.0	chr22	45978685	45978720	(4839748)	+	(GCGGGC)n	Simple_repeat	1	37	(0)	2484825
2628	17.4	2.5	1.0	chr22	48075771	48076276	(2742192)	+	MLT2B2	LTR/ERVL	2	515	(0)	2487773
13	10.7	6.7	0.0	chr22	49918609	49918638	(899830)	+	G-rich	Low_complexity	1	32	(0)	2489963
13	24.9	2.0	2.0	chr22	49918663	49918711	(899757)	+	(GGCG)n	Simple_repeat	1	50	(0)	2489964
14	24.1	3.7	5.9	chr22	49918754	49918792	(899676)	+	(CGCCG)n	Simple_repeat	1	68	(17)	2489965
16	19.5	0.0	0.0	chr22	49918793	49918827	(899641)	+	(GCT)n	Simple_repeat	1	35	(0)	2489966
14	24.1	3.7	5.9	chr22	49918828	49918835	(899633)	+	(CGCCG)n	Simple_repeat	69	85	(0)	2489965
18	15.8	4.8	0.0	chr22	50583193	50583234	(235234)	+	(CGG)n	Simple_repeat	1	44	(0)	2490907
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
1272	22.5	21.8	4.7	chr3	9388322	9388793	(188906766)	C	Charlie1	DNA/hAT-Charlie	(977)	1804	1248	2507122
472	19.4	2.0	0.0	chr3	9792184	9792281	(188503278)	+	MIR	SINE/MIR	131	230	(32)	2507967
424	23.6	0.0	0.0	chr3	9952563	9952651	(188342908)	C	L3	LINE/CR1	(66)	4033	3945	2508333
13	22.4	0.0	4.4	chr3	11719351	11719395	(186576164)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2511932
13	19.6	4.0	3.9	chr3	11719645	11719694	(186575865)	+	(AGGCC)n	Simple_repeat	1	52	(0)	2511933
534	26.1	11.4	1.4	chr3	12831638	12831857	(185463702)	C	MIRb	SINE/MIR	(8)	260	6	2514210
1446	15.8	6.2	1.5	chr3	12835158	12835417	(185460142)	+	AluJb	SINE/Alu	19	291	(21)	2514219
2236	18.5	2.5	7.1	chr3	13425369	13425859	(184869700)	+	MLT2B2	LTR/ERVL	3	522	(38)	2515209
19205	9.1	1.1	2.7	chr3	16744680	16747716	(181547843)	+	HERVH-int	LTR/ERV1	1	2987	(4726)	2520975
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
15	17.5	0.0	0.0	chr3	20040242	20040274	(178255285)	+	(GCCGCC)n	Simple_repeat	1	33	(0)	2525556
21588	11.5	2.2	1.3	chr3	21012260	21017860	(177277699)	C	L1PB1	LINE/L1	(361)	6506	862	2526879
237	24.4	27.2	1.9	chr3	23921216	23921428	(174374131)	+	L2	LINE/L2	2744	3030	(389)	2531004
14	0.0	0.0	0.0	chr3	25664850	25664867	(172630692)	+	(GCC)n	Simple_repeat	1	18	(0)	2533626
2591	7.3	2.1	8.0	chr3	27212871	27213270	(171082289)	+	MER51B	LTR/ERV1	2	377	(0)	2535743
16	14.2	0.0	0.0	chr3	27484180	27484224	(170811335)	+	(CTGCCG)n	Simple_repeat	1	45	(0)	2536145
16	27.1	4.5	3.2	chr3	27484236	27484324	(170811235)	+	(CGTG)n	Simple_repeat	1	93	(0)	2536146
2991	15.5	6.7	1.8	chr3	31259156	31259649	(167035910)	C	MLT2B1	LTR/ERVL	(0)	520	1	2541801
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
9780	8.8	3.9	14.1	chr3	32902612	32904375	(165391184)	+	LTR12C	LTR/ERV1	3	1579	(0)	2544904
1878	15.2	2.7	4.3	chr3	33547117	33547486	(164748073)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	2546053
183	30.0	2.7	5.2	chr3	37967183	37967298	(160328261)	C	MIR3	SINE/MIR	(6)	202	90	2552342
2145	9.9	1.0	0.3	chr3	39408818	39409111	(158886448)	+	AluYc	SINE/Alu	1	296	(3)	2554476
1535	18.6	0.7	2.5	chr3	39413284	39413563	(158881996)	+	AluJo	SINE/Alu	13	287	(25)	2554483
2097	10.9	0.7	0.3	chr3	39415227	39415510	(158880049)	+	AluSx	SINE/Alu	5	289	(23)	2554485
1906	15.5	1.7	0.3	chr3	39415532	39415828	(158879731)	+	AluJr	SINE/Alu	1	301	(11)	2554486
2625	17.6	4.2	0.8	chr3	39541293	39541776	(158753783)	C	MLT2B4	LTR/ERVL	(46)	510	6	2554700
13	25.5	0.0	0.0	chr3	43690981	43691017	(154604542)	+	(GCG)n	Simple_repeat	1	37	(0)	2560995
713	0.0	0.0	0.0	chr3	45688998	45689071	(152606488)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	2564290
664	25.8	1.3	1.9	chr3	46584882	46585039	(151710520)	C	LTR16A	LTR/ERVL	(174)	277	121	2565640
13	21.1	2.6	0.0	chr3	48089099	48089136	(150206423)	+	(TGCGGCC)n	Simple_repeat	1	39	(0)	2568629
12	16.3	2.8	2.7	chr3	48429210	48429245	(149866314)	+	(GAGCCCC)n	Simple_repeat	1	37	(0)	2569299
13	19.2	0.0	0.0	chr3	48898796	48898825	(149396734)	+	(GTCA)n	Simple_repeat	1	30	(0)	2570220
13	9.0	4.9	7.0	chr3	49007806	49007846	(149287713)	+	(GGAGCGC)n	Simple_repeat	1	43	(0)	2570462
13	24.9	3.7	1.8	chr3	49689476	49689529	(148606030)	+	(GCGCGT)n	Simple_repeat	1	56	(0)	2571792
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
2624	17.1	4.8	1.2	chr3	51884665	51885160	(146410399)	C	MLT2B2	LTR/ERVL	(0)	515	1	2575108
6912	22.1	6.8	4.1	chr3	51885161	51886650	(146408909)	C	L1MD	LINE/L1	(848)	5298	3778	2575107
8156	6.7	21.6	1.3	chr3	51990374	51991626	(146303933)	+	LTR12C	LTR/ERV1	2	1579	(0)	2575270
239	27.3	2.2	5.4	chr3	53254693	53254785	(145040774)	C	MIRb	SINE/MIR	(79)	189	100	2577295
809	29.0	10.7	2.0	chr3	54628350	54628655	(143666904)	C	L2	LINE/L2	(426)	2993	2658	2579319
1039	26.1	11.7	9.3	chr3	54628656	54629129	(143666430)	C	LTR33A	LTR/ERVL	(20)	500	14	2579320
2214	9.2	0.0	0.7	chr3	54630920	54631201	(143664358)	+	AluSx1	SINE/Alu	1	280	(32)	2579323
38	0.0	0.0	0.0	chr3	54631204	54631236	(143664323)	+	(AC)n	Simple_repeat	1	33	(0)	2579324
865	22.9	11.6	2.3	chr3	54634218	54634481	(143661078)	+	L2a	LINE/L2	3008	3299	(127)	2579331
1479	18.4	9.7	0.9	chr3	55551560	55551877	(142743682)	C	MLT2D	LTR/ERVL	(65)	349	1	2580630
263	33.1	1.5	5.1	chr3	55551878	55552014	(142743545)	C	L1MC5a	LINE/L1	(67)	2710	2579	2580633
10782	10.1	3.0	1.0	chr3	59229671	59231217	(139064342)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2587209
2272	19.0	10.5	1.6	chr3	60851941	60852443	(137443116)	+	MLT2B4	LTR/ERVL	4	556	(0)	2589624
2446	14.9	12.7	1.6	chr3	61707267	61707757	(136587802)	C	MLT2B4	LTR/ERVL	(3)	553	1	2591099
15	19.9	0.0	2.4	chr3	61707771	61707790	(136587769)	+	(TTTTTAT)n	Simple_repeat	1	20	(0)	2591100
1950	16.2	0.0	0.0	chr3	61707791	61708086	(136587473)	C	AluJb	SINE/Alu	(14)	298	3	2591101
1060	20.6	19.3	9.4	chr3	61820102	61820557	(136475002)	C	MLT2B1	LTR/ERVL	(6)	514	3	2591288
27	0.0	0.0	0.0	chr3	61820604	61820629	(136474930)	+	(T)n	Simple_repeat	1	26	(0)	2591289
739	18.1	3.0	1.2	chr3	65952919	65953080	(132342479)	C	MIR	SINE/MIR	(21)	241	77	2598350
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
2989	16.4	2.5	0.9	chr3	68758838	68759384	(129536175)	C	MLT2B4	LTR/ERVL	(0)	556	1	2602933
18	17.9	3.2	4.7	chr3	71785090	71785151	(126510408)	+	G-rich	Low_complexity	1	64	(0)	2607804
1621	25.3	2.4	1.2	chr3	76930523	76930974	(121364585)	C	MLT2B1	LTR/ERVL	(0)	567	9	2616211
267	27.0	1.6	0.0	chr3	76930995	76931057	(121364502)	+	L2a	LINE/L2	3293	3356	(70)	2616208
9099	13.6	5.3	3.7	chr3	84621127	84622679	(113672880)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2625979
898	22.9	9.9	11.5	chr3	88192521	88192900	(110102659)	C	MLT2B1	LTR/ERVL	(61)	506	6	2630504
211	31.2	1.5	0.0	chr3	88192930	88192993	(110102566)	C	L3	LINE/CR1	(143)	3956	3892	2630503
737	13.5	0.7	4.7	chr3	95408086	95408233	(102887326)	+	MER61-int	LTR/ERV1	2	143	(5074)	2635438
505	8.5	16.1	1.1	chr3	95408310	95408404	(102887155)	+	MER61-int	LTR/ERV1	343	454	(4763)	2635438
13	16.9	3.0	0.0	chr3	98901541	98901573	(99393986)	+	GA-rich	Low_complexity	1	34	(0)	2639606
1888	12.3	24.3	3.7	chr3	100183755	100184191	(98111368)	+	MLT2B4	LTR/ERVL	1	556	(0)	2641300
10681	11.8	4.6	1.1	chr3	100458097	100459619	(97835940)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	3	2641757
1029	18.1	2.8	7.6	chr3	101037552	101037771	(97257788)	+	ERVL-int	LTR/ERVL	5492	5709	(5)	2642481
2618	19.6	2.4	1.6	chr3	101037776	101038311	(97257248)	+	MLT2B1	LTR/ERVL	1	515	(39)	2642481
2048	10.4	2.8	0.0	chr3	101679924	101680202	(96615357)	+	AluSp	SINE/Alu	1	287	(26)	2643427
1676	15.1	2.4	3.8	chr3	101680508	101680799	(96614760)	C	AluJb	SINE/Alu	(19)	293	6	2643428
13	22.6	0.0	2.6	chr3	101849741	101849778	(96445781)	+	(CGC)n	Simple_repeat	1	38	(0)	2643702
2088	12.7	0.7	0.0	chr3	109324107	109324398	(88971161)	C	AluSq2	SINE/Alu	(19)	294	1	2653670
1088	15.3	0.0	0.0	chr3	109324412	109324561	(88970998)	C	AluSx	SINE/Alu	(29)	283	134	2653671
1812	14.5	2.3	1.0	chr3	109325117	109325413	(88970146)	C	AluJb	SINE/Alu	(11)	301	1	2653674
2011	13.5	1.7	0.3	chr3	109327390	109327685	(88967874)	+	AluSx1	SINE/Alu	1	300	(12)	2653678
2523	6.6	0.0	0.0	chr3	109329255	109329555	(88966004)	+	AluY	SINE/Alu	2	302	(9)	2653679
2359	9.8	0.0	0.0	chr3	112415197	112415491	(85880068)	+	AluSc	SINE/Alu	1	295	(14)	2657799
337	40.2	1.6	2.6	chr3	112415521	112415709	(85879850)	+	L2a	LINE/L2	2922	3108	(318)	2657800
3985	11.7	2.1	0.6	chr3	112415712	112416357	(85879202)	C	L1MA2	LINE/L1	(0)	6304	5649	2657801
1235	15.2	7.3	0.8	chr3	112416879	112417123	(85878436)	C	MER21A	LTR/ERVL	(667)	264	3	2657802
4064	14.8	5.6	2.7	chr3	112417512	112418253	(85877306)	+	LTR60B	LTR/ERV1	1	765	(0)	2657803
2792	18.5	2.2	3.4	chr3	117692413	117692973	(80602586)	+	MLT2B3	LTR/ERVL	1	554	(0)	2665243
19	23.1	4.0	2.6	chr3	120285175	120285248	(78010311)	+	(GCGCCGG)n	Simple_repeat	1	77	(0)	2668922
314	24.3	0.0	0.0	chr3	126267901	126267974	(72027585)	C	MIR	SINE/MIR	(93)	169	96	2678320
1098	23.1	7.7	0.0	chr3	127042823	127043134	(71252425)	+	MLT2B4	LTR/ERVL	1	338	(218)	2679417
17	24.5	1.8	1.8	chr3	127629228	127629282	(70666277)	+	(GCT)n	Simple_repeat	1	56	(0)	2680397
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
13	16.6	0.0	0.0	chr3	128726204	128726230	(69569329)	+	(GGC)n	Simple_repeat	1	27	(0)	2682345
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
2837	16.5	6.1	1.1	chr3	134820843	134821370	(63474189)	C	MLT2B4	LTR/ERVL	(0)	556	1	2692010
13	9.8	9.1	0.0	chr3	136752057	136752089	(61543470)	+	(GCTC)n	Simple_repeat	1	36	(0)	2695003
2189	18.9	7.7	1.2	chr3	138424814	138425205	(59870354)	+	MLT2B1	LTR/ERVL	1	429	(91)	2697519
35	15.0	4.2	4.0	chr3	141486916	141487011	(56808548)	+	G-rich	Low_complexity	1	100	(0)	2702372
2161	23.2	2.1	1.8	chr3	142061374	142061886	(56233673)	+	MLT2B3	LTR/ERVL	1	515	(39)	2703463
14	27.2	1.6	3.2	chr3	150408713	150408773	(47886786)	+	(CCGC)n	Simple_repeat	1	62	(0)	2715187
18	23.7	0.0	2.0	chr3	150408885	150408940	(47886619)	+	(CCT)n	Simple_repeat	1	54	(0)	2715188
14	22.2	6.1	2.9	chr3	150408941	150408948	(47886611)	+	(CACCGC)n	Simple_repeat	3	70	(0)	2715189
15	17.7	0.0	0.0	chr3	150546396	150546427	(47749132)	+	(CGC)n	Simple_repeat	1	32	(0)	2715401
18	7.6	0.0	0.0	chr3	157159984	157160011	(41135548)	+	(CGT)n	Simple_repeat	1	28	(0)	2725060
1997	9.3	9.0	10.6	chr3	162598531	162598946	(35696613)	+	LTR14B	LTR/ERVK	1	608	(0)	2732796
2046	25.3	1.1	0.4	chr3	162598948	162599502	(35696057)	+	L1MB7	LINE/L1	5259	5817	(361)	2732795
10914	11.5	0.6	1.4	chr3	164912202	164913790	(33381769)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	2735543
2162	23.4	5.0	4.2	chr3	165297333	165297881	(32997678)	C	MLT2B3	LTR/ERVL	(0)	554	1	2736030
15	19.9	0.0	0.0	chr3	165297889	165297917	(32997642)	+	(T)n	Simple_repeat	1	29	(0)	2736031
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
483	23.1	16.9	0.0	chr3	170862828	170862970	(27432589)	C	MER58A	DNA/hAT-Charlie	(13)	211	40	2743728
483	22.3	9.2	0.0	chr3	170862986	170863124	(27432435)	+	MLT1F	LTR/ERVL-MaLR	388	540	(29)	2743727
1491	24.3	10.6	5.2	chr3	170863170	170863633	(27431926)	+	L2a	LINE/L2	2923	3414	(12)	2743726
2111	13.8	0.3	1.0	chr3	170864268	170864572	(27430987)	+	AluSx1	SINE/Alu	1	303	(9)	2743731
225	38.9	12.5	1.6	chr3	170864756	170865076	(27430483)	+	L2b	LINE/L2	3014	3374	(1)	2743732
2849	18.5	1.0	0.8	chr3	171817610	171818126	(26477433)	C	MLT2B1	LTR/ERVL	(0)	520	3	2745133
1987	25.2	5.5	4.7	chr3	171818127	171818402	(26477157)	C	Charlie7	DNA/hAT-Charlie	(1160)	1452	1182	2745132
1580	17.3	4.3	0.0	chr3	176318449	176318737	(21976822)	C	MLT1B	LTR/ERVL-MaLR	(88)	302	1	2751521
27739	2.4	0.0	0.0	chr3	178859949	178865979	(19429580)	+	L1PA2	LINE/L1	124	6155	(0)	2755285
8470	16.4	8.1	0.8	chr3	185754464	185755993	(12539566)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	2767024
17	19.1	3.5	3.4	chr3	186109117	186109173	(12186386)	+	(CGCGGCC)n	Simple_repeat	1	59	(0)	2767731
2333	9.1	1.3	0.0	chr3	187170364	187170659	(11124900)	C	AluSg	SINE/Alu	(10)	300	1	2769695
4932	26.5	9.3	3.6	chr3	187170660	187170915	(11124644)	C	L1MC5a	LINE/L1	(625)	2152	1885	2769694
2048	13.6	0.3	1.0	chr3	187170916	187171225	(11124334)	C	AluSz	SINE/Alu	(4)	308	1	2769696
4932	26.5	9.3	3.6	chr3	187171226	187172681	(11122878)	C	L1MC5a	LINE/L1	(893)	1884	332	2769694
304	26.9	8.1	6.4	chr3	187174260	187174430	(11121129)	C	MIRb	SINE/MIR	(58)	210	37	2769698
12	31.2	1.6	3.2	chr3	187744737	187744797	(10550762)	+	GA-rich	Low_complexity	1	62	(0)	2770632
16	21.9	1.7	5.1	chr3	187744990	187745047	(10550512)	+	(CTC)n	Simple_repeat	1	59	(0)	2770633
27	22.9	2.6	0.0	chr3	188154039	188154114	(10141445)	+	(GGCGCGG)n	Simple_repeat	1	78	(0)	2771374
29	7.9	0.0	0.0	chr3	188154188	188154228	(10141331)	+	(GCC)n	Simple_repeat	1	41	(0)	2771375
2253	11.0	0.0	1.0	chr3	192880063	192880370	(5415189)	+	AluSx3	SINE/Alu	1	305	(6)	2778606
18041	14.5	17.0	14.5	chr3	195606216	195606743	(2688816)	+	MER4-int	LTR/ERV1	2659	3300	(3298)	2783350
2436	6.9	0.0	0.0	chr3	195606744	195607031	(2688528)	C	AluY	SINE/Alu	(23)	288	1	2783354
1650	14.3	3.4	0.8	chr3	196940828	196941086	(1354473)	+	AluJr	SINE/Alu	28	293	(19)	2786080
2314	6.6	2.1	0.0	chr3	196941104	196941389	(1354170)	C	AluSg4	SINE/Alu	(18)	292	1	2786081
451	25.2	6.6	1.6	chr3	197957319	197957447	(338112)	C	LTR16B	LTR/ERVL	(192)	271	136	2787891
23	35.1	0.8	2.4	chr4	678077	678235	(189536320)	+	(GTGTGT)n	Simple_repeat	1	156	(0)	2789396
1617	17.5	5.1	2.5	chr4	3868047	3868444	(186346111)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	24	2793740
15	21.5	6.1	0.0	chr4	5888483	5888531	(184326024)	+	GA-rich	Low_complexity	1	52	(0)	2797363
20	3.3	0.0	5.7	chr4	6716016	6716050	(183498505)	+	(GCGTGA)n	Simple_repeat	1	35	(0)	2798928
17	29.0	3.7	1.2	chr4	6716119	6716124	(183498431)	+	(GCGTGC)n	Simple_repeat	1	11	(73)	2798929
16	25.2	0.0	0.0	chr4	6716125	6716167	(183498388)	+	(GCGT)n	Simple_repeat	1	43	(0)	2798930
17	29.0	3.7	1.2	chr4	6716168	6716199	(183498356)	+	(GCGTGC)n	Simple_repeat	12	84	(0)	2798929
16	23.0	0.0	5.4	chr4	7192303	7192358	(183022197)	+	GA-rich	Low_complexity	1	56	(0)	2799781
12	12.7	3.9	9.3	chr4	7192437	7192488	(183022067)	+	(GGTGGC)n	Simple_repeat	1	54	(0)	2799782
14	17.6	2.5	2.4	chr4	10116253	10116292	(180098263)	+	(GGCAG)n	Simple_repeat	1	41	(0)	2804232
564	24.1	4.5	3.3	chr4	13654692	13654981	(176559574)	+	LTR41B	LTR/ERVL	434	752	(6)	2809659
20	20.4	0.0	0.0	chr4	15002457	15002501	(175212054)	+	(GCG)n	Simple_repeat	1	45	(0)	2811954
14	29.7	0.0	0.0	chr4	15655282	15655330	(174559225)	+	(CGCCAC)n	Simple_repeat	1	49	(0)	2813008
2131	20.4	6.7	4.2	chr4	16879295	16879800	(173334755)	+	MLT2B1	LTR/ERVL	1	520	(0)	2815130
841	10.8	1.4	3.5	chr4	16911175	16911318	(173303237)	+	MLT2B4	LTR/ERVL	2	142	(414)	2815198
5415	17.0	2.6	2.1	chr4	16911319	16911799	(173302756)	+	ERVL-B4-int	LTR/ERVL	736	1221	(4493)	2815199
2254	20.7	5.4	2.0	chr4	17339390	17339891	(172874664)	C	MLT2B1	LTR/ERVL	(0)	520	1	2815998
225	31.6	16.7	2.3	chr4	17339917	17340130	(172874425)	C	MIR	SINE/MIR	(0)	262	12	2815999
992	16.3	2.0	5.3	chr4	19039868	19040074	(171174481)	C	MLT2B4	LTR/ERVL	(356)	200	1	2818880
31	3.1	0.0	0.0	chr4	24472664	24472696	(165741859)	+	(GCC)n	Simple_repeat	1	33	(0)	2827180
24	15.1	4.9	1.6	chr4	24472751	24472762	(165741793)	+	(GCGTGT)n	Simple_repeat	1	61	(0)	2827181
27	14.7	2.1	0.0	chr4	24472763	24472809	(165741746)	+	(TG)n	Simple_repeat	1	48	(0)	2827182
29	19.6	0.0	0.0	chr4	24472884	24472921	(165741634)	+	(GC)n	Simple_repeat	1	38	(0)	2827183
296	29.4	2.5	2.5	chr4	24488950	24489106	(165725449)	C	MIRb	SINE/MIR	(35)	233	77	2827219
14	15.9	0.0	0.0	chr4	25234217	25234244	(164980311)	+	GA-rich	Low_complexity	1	28	(0)	2828551
2669	19.4	2.5	1.4	chr4	35490844	35491350	(154723205)	C	MLT2B4	LTR/ERVL	(43)	513	2	2843512
12	25.3	3.8	1.8	chr4	38664311	38664363	(151550192)	+	(CGCC)n	Simple_repeat	1	55	(0)	2848198
1215	17.7	1.9	0.0	chr4	39455570	39455778	(150758777)	+	AluJb	SINE/Alu	79	291	(21)	2849672
2199	20.2	9.6	2.7	chr4	42168711	42169193	(148045362)	C	MLT2B1	LTR/ERVL	(0)	520	1	2855182
188	24.2	8.3	4.3	chr4	52713731	52713762	(137500793)	C	MIR	SINE/MIR	(71)	191	155	2866618
1072	21.2	21.4	8.5	chr4	52713763	52714175	(137500380)	+	LTR21A	LTR/ERV1	1	481	(0)	2866619
337	25.9	14.9	4.2	chr4	52715283	52715496	(137499059)	C	L2a	LINE/L2	(213)	3213	2973	2866617
327	19.2	17.0	0.0	chr4	52716591	52716668	(137497887)	C	MER3	DNA/hAT-Charlie	(115)	94	1	2866627
1567	15.2	7.1	0.0	chr4	52718103	52718352	(137496203)	+	AluJr	SINE/Alu	21	289	(23)	2866631
687	29.4	4.5	4.9	chr4	52834495	52834741	(137379814)	C	MIR	SINE/MIR	(0)	262	17	2866850
2422	8.1	14.5	0.5	chr4	52834802	52835186	(137379369)	+	LTR7	LTR/ERV1	1	448	(2)	2866851
442	24.8	9.2	2.0	chr4	52866912	52867063	(137347492)	C	MIR	SINE/MIR	(15)	247	84	2866899
396	25.4	15.5	1.2	chr4	52867462	52867632	(137346923)	C	MIRc	SINE/MIR	(3)	265	66	2866900
710	11.2	1.7	0.8	chr4	54757344	54757460	(135457095)	C	MLT2B4	LTR/ERVL	(438)	118	1	2869841
331	30.1	3.8	9.7	chr4	54757463	54757657	(135456898)	C	MLT1N2	LTR/ERVL-MaLR	(376)	186	4	2869842
18935	14.7	4.7	1.2	chr4	54976488	54980913	(135233642)	+	L1MA2	LINE/L1	17	4601	(2964)	2870189
2345	10.3	0.3	0.0	chr4	56463412	56463711	(133750844)	+	AluSp	SINE/Alu	1	301	(12)	2872644
10818	11.0	1.8	2.7	chr4	57126848	57128439	(133086116)	+	THE1B-int	LTR/ERVL-MaLR	4	1580	(0)	2874012
1869	18.7	3.8	0.8	chr4	57375940	57376380	(132838175)	+	MLT2B4	LTR/ERVL	1	464	(56)	2874418
2076	15.8	1.9	3.2	chr4	61734318	61734697	(128479858)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2879814
1516	13.1	0.0	7.4	chr4	61750928	61751183	(128463372)	+	MER1B	DNA/hAT-Charlie	32	268	(71)	2879833
1833	17.3	0.0	0.7	chr4	61752650	61752938	(128461617)	+	AluJb	SINE/Alu	1	287	(25)	2879839
422	29.6	12.6	5.5	chr4	61752939	61752993	(128461562)	C	MER39	LTR/ERV1	(485)	57	8	2879838
4646	23.0	5.1	5.8	chr4	61753183	61754555	(128460000)	C	MER31-int	LTR/ERV1	(159)	4777	3416	2879840
25079	5.8	0.6	1.1	chr4	61754619	61760805	(128453750)	C	L1PA4	LINE/L1	(0)	6155	1	2879842
4181	9.5	1.9	1.5	chr4	61760818	61761405	(128453150)	C	LTR8	LTR/ERV1	(51)	640	51	2879841
4828	22.1	7.2	4.9	chr4	61761968	61763186	(128451369)	C	MER31-int	LTR/ERV1	(1602)	3334	2067	2879838
1854	11.9	1.5	0.0	chr4	61763187	61763447	(128451108)	C	AluSc8	SINE/Alu	(11)	300	36	2879845
4828	22.1	5.0	4.6	chr4	61763448	61764213	(128450342)	C	MER31-int	LTR/ERV1	(2870)	2066	1136	2879838
10367	10.8	8.0	0.3	chr4	67322601	67324058	(122890497)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2886755
4235	9.7	3.6	2.9	chr4	67721662	67722290	(122492265)	C	MER41B	LTR/ERV1	(0)	634	1	2887372
3975	15.0	1.3	2.5	chr4	67722291	67722558	(122491997)	+	LTR58	LTR/ERV1	410	673	(6)	2887371
2223	13.3	0.3	0.0	chr4	68405499	68405807	(121808748)	C	AluSz	SINE/Alu	(2)	310	1	2888312
2370	11.5	6.7	5.6	chr4	68405808	68405893	(121808662)	+	MER4-int	LTR/ERV1	349	419	(6179)	2888311
2581	8.5	10.9	0.8	chr4	68405894	68406295	(121808260)	+	LTR7	LTR/ERV1	1	448	(2)	2888313
2370	11.5	26.8	0.8	chr4	68406296	68406569	(121807986)	+	MER4-int	LTR/ERV1	345	816	(5782)	2888311
20	12.4	0.0	0.0	chr4	68406572	68406606	(121807949)	+	(ACA)n	Simple_repeat	1	35	(0)	2888314
343	16.4	0.0	0.0	chr4	68406697	68406751	(121807804)	+	MER4-int	LTR/ERV1	838	892	(5706)	2888311
7447	11.6	5.0	3.5	chr4	68406746	68407203	(121807352)	+	MER4-int	LTR/ERV1	994	1484	(5114)	2888311
2555	8.0	11.2	0.5	chr4	68407204	68407603	(121806952)	C	LTR7	LTR/ERV1	(2)	448	1	2888315
7447	11.6	5.0	3.5	chr4	68407604	68408597	(121805958)	+	MER4-int	LTR/ERV1	1485	2473	(4125)	2888311
17	11.6	0.0	0.0	chr4	70705259	70705287	(119509268)	+	(GCG)n	Simple_repeat	1	29	(0)	2891024
14	19.4	2.3	2.3	chr4	75724900	75724942	(114489613)	+	G-rich	Low_complexity	1	44	(0)	2897949
14	0.0	0.0	0.0	chr4	75940890	75940907	(114273648)	+	(CAG)n	Simple_repeat	1	18	(0)	2898439
15	5.5	0.0	0.0	chr4	78776041	78776059	(111438496)	+	(C)n	Simple_repeat	1	19	(0)	2902732
12	19.1	3.8	5.5	chr4	78776078	78776130	(111438425)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	2902733
1598	16.5	5.9	0.4	chr4	82422130	82422401	(107792154)	C	AluJb	SINE/Alu	(24)	288	1	2907600
9110	16.6	3.1	2.7	chr4	82573866	82574372	(107640183)	C	L1MB5	LINE/L1	(913)	5233	4710	2907853
1510	18.0	9.6	2.5	chr4	82574373	82574737	(107639818)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	2907857
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
2654	18.3	3.5	3.5	chr4	87931419	87932165	(102282390)	+	L1M3	LINE/L1	4840	5574	(600)	2916252
6946	16.4	2.0	1.0	chr4	87932168	87932761	(102281794)	C	L1M3	LINE/L1	(1316)	4824	4216	2916253
4438	12.8	0.0	0.2	chr4	87932762	87933395	(102281160)	+	MER41B	LTR/ERV1	2	634	(0)	2916254
23	31.3	5.2	0.7	chr4	88379171	88379305	(101835250)	+	G-rich	Low_complexity	1	142	(0)	2917064
3807	21.8	3.8	0.2	chr4	91629927	91630880	(98583675)	+	L1M2	LINE/L1	1910	2899	(3950)	2921366
13865	9.5	1.5	0.3	chr4	92250040	92252822	(97961733)	C	L1PA10	LINE/L1	(0)	6168	3358	2922044
2068	13.4	5.8	2.0	chr4	92252826	92253175	(97961380)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2922045
7256	11.8	0.3	0.0	chr4	92253176	92254186	(97960369)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	567	2922045
5174	21.5	4.4	2.9	chr4	92254187	92255466	(97959089)	C	L1P3b	LINE/L1	(5141)	1320	8	2922046
351	28.1	6.9	0.8	chr4	92265761	92265882	(97948673)	C	MLT1L	LTR/ERVL-MaLR	(136)	474	345	2922057
13	18.9	2.8	0.0	chr4	92266232	92266267	(97948288)	+	(TTTTATA)n	Simple_repeat	1	37	(0)	2922058
1225	23.8	6.5	4.2	chr4	92266492	92266938	(97947617)	+	LTR37B	LTR/ERV1	11	468	(0)	2922059
12526	17.9	3.5	0.2	chr4	92431650	92433806	(97780749)	C	L1MA3	LINE/L1	(5322)	2243	12	2922271
615	30.0	3.5	3.5	chr4	94416847	94417090	(95797465)	C	MIR	SINE/MIR	(31)	237	1	2924967
2595	15.5	10.4	1.0	chr4	94417151	94417653	(95796902)	+	MLT2B4	LTR/ERVL	1	556	(0)	2924968
12	25.6	0.0	0.0	chr4	98658520	98658556	(91555999)	+	(CGTC)n	Simple_repeat	1	37	(0)	2930459
26	22.0	4.8	5.4	chr4	98658600	98658723	(91555832)	+	(CGCT)n	Simple_repeat	1	130	(0)	2930460
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
2315	10.3	0.0	0.0	chr4	108626958	108627249	(81587306)	+	AluSc8	SINE/Alu	1	292	(19)	2943764
230	21.2	0.0	2.2	chr4	108627504	108627562	(81586993)	C	MIR	SINE/MIR	(160)	108	50	2943766
2231	9.2	2.0	0.3	chr4	108627581	108627872	(81586683)	+	AluSx	SINE/Alu	2	298	(14)	2943767
2385	10.9	0.0	0.0	chr4	112644943	112645244	(77569311)	C	AluSg	SINE/Alu	(8)	302	1	2949526
13	19.9	0.0	0.0	chr4	112645245	112645265	(77569290)	+	(TATAA)n	Simple_repeat	5	25	(0)	2949527
19	14.1	3.9	3.8	chr4	112647197	112647247	(77567308)	+	GA-rich	Low_complexity	1	53	(0)	2949532
2451	6.7	0.3	0.0	chr4	112719447	112719745	(77494810)	+	AluYm1	SINE/Alu	1	300	(11)	2949709
1955	15.9	16.6	6.6	chr4	113388977	113389409	(76825146)	C	MLT2B4	LTR/ERVL	(43)	513	1	2950741
4739	17.4	1.3	3.5	chr4	114399064	114399933	(75814622)	C	LTR1D	LTR/ERV1	(143)	832	1	2952013
512	17.6	4.4	0.0	chr4	115590011	115590118	(74624437)	C	MLT2B2	LTR/ERVL	(402)	113	1	2953452
21	23.0	2.4	4.7	chr4	119627302	119627391	(70587164)	+	(CCGCG)n	Simple_repeat	1	87	(0)	2958740
20	12.0	0.0	2.6	chr4	119628968	119629005	(70585550)	+	(GGC)n	Simple_repeat	1	38	(0)	2958742
6661	18.8	5.8	1.5	chr4	120003749	120005302	(70209253)	+	L1M3f	LINE/L1	1239	2861	(4704)	2959247
1128	11.7	0.0	0.0	chr4	121749162	121749324	(68465231)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	228	2961514
1163	23.1	17.3	0.5	chr4	121749325	121749751	(68464804)	+	MLT2B4	LTR/ERVL	1	514	(42)	2961515
865	19.7	2.1	0.0	chr4	122899676	122899812	(67314743)	+	FRAM	SINE/Alu	1	140	(36)	2963187
2472	12.0	12.0	7.7	chr4	122899822	122900300	(67314255)	C	LTR22C0	LTR/ERVK	(0)	502	1	2963188
490	23.1	11.2	4.2	chr4	122902495	122902684	(67311871)	+	L2a	LINE/L2	3222	3426	(0)	2963193
2047	12.8	27.7	1.1	chr4	123362247	123362626	(66851929)	+	MLT2B1	LTR/ERVL	1	520	(0)	2963844
17	25.9	0.0	1.9	chr4	123505639	123505690	(66708865)	+	(CGC)n	Simple_repeat	1	52	(0)	2964104
3107	14.1	2.1	1.8	chr4	127444214	127444688	(62769867)	+	MLT2B2	LTR/ERVL	1	472	(43)	2969075
12	11.9	0.0	6.5	chr4	128809779	128809809	(61404746)	+	(GCCC)n	Simple_repeat	1	31	(0)	2971405
20	29.9	4.9	0.0	chr4	128809881	128809962	(61404593)	+	(CG)n	Simple_repeat	1	86	(0)	2971406
3524	15.2	1.4	1.5	chr4	134677232	134677934	(55536621)	C	L1PA13	LINE/L1	(717)	6068	5370	2978423
19268	10.4	3.4	0.6	chr4	134680244	134683143	(55531412)	C	HERVH-int	LTR/ERV1	(4728)	2985	1	2978424
2274	11.4	1.8	1.2	chr4	144386358	144386694	(45827861)	C	THE1C	LTR/ERVL-MaLR	(36)	339	1	2991541
415	4.0	0.0	0.0	chr4	144386736	144386785	(45827770)	+	MLT2B4	LTR/ERVL	6	55	(501)	2991542
1547	16.5	0.4	0.0	chr4	144386786	144387040	(45827515)	C	Tigger3c	DNA/TcMar-Tigger	(2)	600	345	2991543
10891	10.3	2.0	0.0	chr4	157677816	157679364	(32535191)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3010385
2385	9.7	0.0	0.6	chr4	166722599	166722909	(23491646)	+	AluY	SINE/Alu	2	310	(1)	3022703
1771	24.9	3.6	2.5	chr4	166735424	166735913	(23478642)	+	MLT1D	LTR/ERVL-MaLR	8	503	(2)	3022722
31	3.3	0.0	0.0	chr4	166738225	166738255	(23476300)	+	(TG)n	Simple_repeat	1	31	(0)	3022725
24629	7.6	0.2	0.1	chr4	166743490	166749649	(23464906)	+	L1PA5	LINE/L1	178	6327	(0)	3022737
10555	9.4	3.7	5.3	chr4	172862727	172863827	(17350728)	+	THE1B-int	LTR/ERVL-MaLR	496	1580	(0)	3030848
453	31.4	7.6	2.2	chr4	179164696	179164912	(11049643)	+	MIR	SINE/MIR	26	250	(12)	3039151
1724	18.4	3.8	1.3	chr4	179165311	179165661	(11048894)	C	L1MB3	LINE/L1	(3)	6598	6236	3039152
5243	8.0	1.8	3.2	chr4	179165662	179166438	(11048117)	+	MER4E	LTR/ERV1	1	766	(0)	3039153
23	23.3	1.7	0.0	chr4	183099190	183099258	(7115297)	+	GA-rich	Low_complexity	1	70	(0)	3044388
21	9.7	4.3	2.1	chr4	183099352	183099397	(7115158)	+	(CCGCGCC)n	Simple_repeat	1	48	(0)	3044389
290	27.2	4.5	17.1	chr4	183557058	183557124	(6657431)	+	MLT1I	LTR/ERVL-MaLR	117	179	(232)	3045158
2418	19.3	3.5	5.5	chr4	183557125	183557626	(6656929)	+	MLT2B1	LTR/ERVL	1	492	(28)	3045159
2221	17.2	11.9	1.1	chr4	185850701	185851158	(4363397)	+	MLT2B2	LTR/ERVL	1	514	(1)	3048826
2265	21.5	3.5	1.3	chr4	185995352	185995883	(4218672)	C	MLT2B3	LTR/ERVL	(0)	554	11	3049054
230	29.2	5.1	7.1	chr4	186241278	186241417	(3973138)	C	MIRc	SINE/MIR	(114)	154	18	3049386
2003	11.9	0.3	1.1	chr5	320038	320322	(181217937)	+	AluSz6	SINE/Alu	6	288	(24)	3055307
17	4.5	0.0	4.0	chr5	5183757	5183799	(176354460)	+	(GT)n	Simple_repeat	1	41	(0)	3060261
1129	25.6	9.2	5.7	chr5	7262805	7263579	(174274680)	+	L1M4b	LINE/L1	3111	3915	(3091)	3062904
3498	6.9	0.0	0.2	chr5	7263580	7264028	(174274231)	+	LTR7	LTR/ERV1	1	448	(2)	3062911
19647	8.9	1.5	0.5	chr5	7264031	7266988	(174271271)	+	HERVH-int	LTR/ERV1	1	2987	(4726)	3062911
778	26.9	9.4	3.9	chr5	7272388	7272777	(174265482)	+	MLT1C	LTR/ERVL-MaLR	1	414	(53)	3062913
11	12.3	2.3	9.1	chr5	7274237	7274279	(174263980)	+	(GCTGCCA)n	Simple_repeat	1	44	(0)	3062917
2838	18.7	3.1	1.8	chr5	9924071	9924615	(171613644)	+	MLT2B4	LTR/ERVL	1	552	(4)	3066121
331	33.8	0.0	1.4	chr5	12650786	12650926	(168887333)	+	L1ME3A	LINE/L1	6033	6171	(2)	3069829
242	31.9	11.4	0.0	chr5	12651016	12651131	(168887128)	+	L1MEc	LINE/L1	182	312	(5923)	3069830
2548	17.6	2.0	0.2	chr5	12653399	12653877	(168884382)	+	L1PB1	LINE/L1	5663	6150	(1)	3069833
3033	10.8	1.3	0.0	chr5	12657916	12658376	(168879883)	C	L1PREC2	LINE/L1	(0)	6160	5694	3069837
6180	5.8	0.5	0.3	chr5	12660382	12661159	(168877100)	C	LTR17	LTR/ERV1	(0)	780	1	3069839
7596	13.4	16.0	0.1	chr5	12661735	12663059	(168875200)	+	LTR12C	LTR/ERV1	3	1577	(2)	3069841
23	20.4	4.3	1.4	chr5	16179074	16179142	(165359117)	+	(GCT)n	Simple_repeat	1	72	(0)	3074628
30	18.2	0.0	0.0	chr5	17217607	17217664	(164320595)	+	(GGC)n	Simple_repeat	1	58	(0)	3076467
16	20.9	2.9	5.7	chr5	17217831	17217898	(164320361)	+	(GCCCC)n	Simple_repeat	1	70	(0)	3076468
562	27.8	11.2	2.4	chr5	17394294	17394503	(164143756)	C	MLT1K	LTR/ERVL-MaLR	(244)	305	75	3076761
1233	18.3	4.7	0.0	chr5	17394508	17394731	(164143528)	+	MLT2B4	LTR/ERVL	3	237	(319)	3076768
18888	15.6	5.0	2.0	chr5	18649018	18653830	(162884429)	C	L1MA3	LINE/L1	(2459)	5106	99	3078348
235	32.5	13.1	0.0	chr5	25411556	25411681	(156126578)	+	L2c	LINE/L2	3022	3166	(221)	3087300
2216	21.1	4.7	4.0	chr5	25416872	25417420	(156120839)	+	MLT2B4	LTR/ERVL	1	553	(3)	3087310
1741	17.0	13.6	0.5	chr5	25418301	25418672	(156119587)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3087311
5940	17.6	3.6	3.6	chr5	25434633	25436820	(156101439)	+	L1MC1	LINE/L1	4127	6316	(17)	3087329
2174	12.4	0.0	3.4	chr5	25438287	25438609	(156099650)	C	AluSq2	SINE/Alu	(1)	312	1	3087331
1090	29.3	8.9	3.4	chr5	25444181	25444795	(156093464)	C	L1MEf	LINE/L1	(999)	1580	613	3087339
12	5.5	0.0	0.0	chr5	32174289	32174307	(149363952)	+	(GGC)n	Simple_repeat	1	19	(0)	3096324
2017	13.2	1.4	1.0	chr5	40825714	40826008	(140712251)	C	AluSx	SINE/Alu	(16)	296	1	3109499
232	25.8	11.4	2.1	chr5	40828670	40828764	(140709495)	+	L2-3_Crp	LINE/L2	844	948	(1148)	3109505
266	26.6	9.6	2.1	chr5	40828794	40828889	(140709370)	+	L2b	LINE/L2	3271	3374	(1)	3109506
12	16.3	5.4	9.0	chr5	41904484	41904557	(139633702)	+	G-rich	Low_complexity	1	78	(0)	3110987
17	18.6	5.3	6.2	chr5	54517730	54517805	(127020454)	+	(CGG)n	Simple_repeat	1	80	(0)	3121856
1923	15.0	16.7	6.3	chr5	58980759	58981220	(122557039)	C	MLT2B1	LTR/ERVL	(0)	520	1	3128884
15043	14.5	6.2	4.1	chr5	58981224	58983927	(122554332)	C	ERVL-int	LTR/ERVL	(2)	5755	2991	3128884
13	17.0	3.0	0.0	chr5	66144345	66144377	(115393882)	+	G-rich	Low_complexity	1	34	(0)	3139018
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
1899	19.2	4.3	1.9	chr5	69459239	69459694	(112078565)	C	MLT2B1	LTR/ERVL	(7)	555	1	3144094
660	16.3	5.4	1.8	chr5	69459703	69459826	(112078433)	C	L1M4	LINE/L1	(1176)	4970	4840	3144093
14	10.4	3.0	2.9	chr5	73120704	73120736	(108417523)	+	(GCGCCG)n	Simple_repeat	1	34	(0)	3150027
1858	19.6	10.8	4.7	chr5	73411748	73412234	(108126025)	C	MLT2B1	LTR/ERVL	(0)	520	1	3150446
2096	18.6	3.0	1.0	chr5	74955787	74956226	(106582033)	+	MLT2B4	LTR/ERVL	4	471	(49)	3152817
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
11	12.8	8.7	4.0	chr5	79991100	79991145	(101547114)	+	(CCTGCGC)n	Simple_repeat	1	50	(0)	3160666
12	9.1	7.7	4.8	chr5	84384811	84384849	(97153410)	+	G-rich	Low_complexity	1	42	(0)	3167185
437	33.1	4.1	2.1	chr5	84480910	84481100	(97057159)	+	MIRb	SINE/MIR	56	250	(18)	3167317
1035	23.2	13.0	4.1	chr5	86622655	86623023	(94915236)	C	MLT2D	LTR/ERVL	(7)	407	1	3170035
2107	17.5	4.8	3.8	chr5	96265219	96265744	(85272515)	C	MLT2B2	LTR/ERVL	(0)	520	5	3182348
2380	15.2	12.6	2.2	chr5	96598624	96599120	(84939139)	+	MLT2B4	LTR/ERVL	1	556	(0)	3182796
2192	18.6	12.2	0.6	chr5	99089902	99090388	(82447871)	C	MLT2B4	LTR/ERVL	(3)	553	3	3186036
668	24.2	0.7	0.0	chr5	101078301	101078449	(80459810)	+	ERVL-B4-int	LTR/ERVL	5515	5664	(3)	3188503
2252	20.1	7.7	2.5	chr5	101078456	101078896	(80459363)	+	MLT2B1	LTR/ERVL	3	466	(54)	3188503
15	16.9	0.0	0.0	chr5	108381811	108381837	(73156422)	+	(CA)n	Simple_repeat	1	27	(0)	3197553
12	9.8	0.0	0.0	chr5	108381945	108381966	(73156293)	+	(GCGA)n	Simple_repeat	1	22	(0)	3197554
8992	13.8	7.8	4.2	chr5	114905004	114906523	(66631736)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	42	3206061
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
1750	14.4	6.0	4.7	chr5	115545130	115545471	(65992788)	C	THE1B	LTR/ERVL-MaLR	(0)	364	18	3206942
38	2.8	0.0	0.0	chr5	116519665	116519701	(65018558)	+	(AC)n	Simple_repeat	1	37	(0)	3208225
811	31.5	12.3	3.3	chr5	116519774	116520470	(65017789)	+	L2c	LINE/L2	2619	3386	(1)	3208221
2412	17.0	7.1	1.7	chr5	123967427	123967905	(57570354)	+	MLT2B2	LTR/ERVL	1	507	(8)	3218057
459	22.4	0.7	10.1	chr5	124898039	124898187	(56640072)	C	Tigger9a	DNA/TcMar-Tigger	(595)	137	3	3219333
20	18.6	0.0	0.0	chr5	124898209	124898245	(56640014)	+	(TG)n	Simple_repeat	1	37	(0)	3219336
36	15.7	10.1	0.0	chr5	124898235	124898333	(56639926)	+	(TA)n	Simple_repeat	1	109	(0)	3219337
1257	11.2	0.0	0.0	chr5	126838629	126838797	(54699462)	C	AluSp	SINE/Alu	(4)	309	141	3222080
233	28.8	9.4	1.6	chr5	126838844	126838970	(54699289)	C	L1MEd	LINE/L1	(5850)	1236	1099	3222081
26789	3.7	0.1	0.0	chr5	130817738	130823763	(50714496)	+	L1PA3	LINE/L1	127	6155	(0)	3227014
35	0.0	0.0	0.0	chr5	134371474	134371505	(47166754)	+	(CGG)n	Simple_repeat	1	32	(0)	3232422
12	18.5	3.6	6.9	chr5	134526881	134526936	(47011323)	+	(CGGCG)n	Simple_repeat	1	58	(0)	3232770
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
12	30.2	2.8	2.7	chr5	134905078	134905149	(46633110)	+	(GGCCGGC)n	Simple_repeat	1	74	(0)	3233621
354	21.9	3.5	1.2	chr5	135082215	135082297	(46455962)	+	MLT1H2	LTR/ERVL-MaLR	75	159	(330)	3233854
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
28	27.2	0.0	4.0	chr5	138465508	138465607	(43072652)	+	(GCC)n	Simple_repeat	1	100	(0)	3238916
1192	18.0	4.5	0.5	chr5	138469469	138469662	(43068597)	C	AluJb	SINE/Alu	(26)	286	85	3238922
237	16.2	0.0	0.0	chr5	138469763	138469799	(43068460)	C	MER77B	LTR/ERVL	(282)	418	382	3238923
2159	9.7	0.3	1.0	chr5	138632818	138633127	(42905132)	C	AluSg7	SINE/Alu	(1)	308	1	3239252
1096	17.9	16.4	0.1	chr5	139285685	139286089	(42252170)	+	L1M3c	LINE/L1	1791	2263	(4526)	3240486
231	23.6	9.2	5.3	chr5	142304859	142304952	(39233307)	C	MIR	SINE/MIR	(162)	100	3	3245692
41149	4.9	1.5	1.0	chr5	143089122	143092154	(38446105)	C	HERVIP10FH-int	LTR/ERV1	(0)	5102	2034	3247156
256	28.9	14.8	0.7	chr5	146049400	146049549	(35488710)	C	MIRc	SINE/MIR	(0)	268	94	3251776
17	24.2	0.0	0.0	chr5	147852813	147852878	(33685381)	+	(TCC)n	Simple_repeat	1	66	(0)	3254955
313	36.0	3.2	6.9	chr5	147853216	147853475	(33684784)	C	MIRc	SINE/MIR	(14)	254	5	3254957
231	31.9	0.0	6.9	chr5	147853740	147853840	(33684419)	+	L2b	LINE/L2	3013	3106	(269)	3254958
2061	15.8	7.6	2.0	chr5	147860286	147860692	(33677567)	+	LTR7	LTR/ERV1	1	432	(0)	3254967
667	27.8	3.1	8.4	chr5	147863043	147863411	(33674848)	+	MER57A-int	LTR/ERV1	5447	5795	(392)	3254968
2527	15.8	0.2	1.4	chr5	147863412	147863848	(33674411)	+	MER57A1	LTR/ERV1	1	432	(0)	3254968
1375	19.2	0.5	16.9	chr5	147869080	147869575	(33668684)	C	MER61-int	LTR/ERV1	(4742)	475	62	3254970
1717	12.5	2.4	1.8	chr5	147874531	147874814	(33663445)	+	LTR8	LTR/ERV1	406	691	(0)	3254971
2397	19.4	7.5	1.0	chr5	147874857	147875377	(33662882)	C	MER74A	LTR/ERVL	(0)	558	1	3254973
240	3.9	0.0	1.0	chr5	149345764	149345798	(32192461)	C	MIR1_Amn	SINE/MIR	(79)	151	117	3257534
208	22.9	0.0	2.0	chr5	150443413	150443461	(31094798)	+	L2	LINE/L2	3026	3073	(346)	3259955
1384	11.7	0.5	0.0	chr5	153935725	153935920	(27602339)	C	MLT2B4	LTR/ERVL	(357)	199	3	3266131
28	34.9	2.2	3.3	chr5	154682789	154682966	(26855293)	+	(CTCCCCC)n	Simple_repeat	1	182	(0)	3267769
499	31.5	8.7	0.0	chr5	154692271	154692448	(26845811)	+	MIRb	SINE/MIR	73	267	(1)	3267798
573	30.8	5.1	2.0	chr5	156914614	156914858	(24623401)	+	MIR	SINE/MIR	3	255	(7)	3271608
15	24.9	5.9	1.4	chr5	160287744	160287811	(21250448)	+	(AGGC)n	Simple_repeat	1	72	(0)	3277852
2512	17.2	4.8	6.4	chr5	163326235	163326762	(18211497)	C	MLT2B1	LTR/ERVL	(0)	520	2	3282353
423	27.8	0.9	0.9	chr5	163326789	163326897	(18211362)	+	L2a	LINE/L2	3303	3411	(15)	3282354
2599	9.1	3.7	0.0	chr5	163525018	163525378	(18012881)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3282686
1242	18.3	4.6	8.3	chr5	163525379	163525516	(18012743)	C	MLT2B4	LTR/ERVL	(409)	147	5	3282685
3018	13.6	4.2	2.5	chr5	163525577	163526133	(18012126)	C	L1MB2	LINE/L1	(7)	6164	5598	3282687
30	25.1	3.1	1.0	chr5	166978909	166978939	(14559320)	+	(CG)n	Simple_repeat	1	33	(0)	3287634
49	2.2	0.0	0.0	chr5	166978940	166978985	(14559274)	+	(TG)n	Simple_repeat	1	46	(0)	3287635
30	25.1	3.1	1.0	chr5	166978986	166979050	(14559209)	+	(CG)n	Simple_repeat	2	66	(0)	3287636
446	18.3	3.5	0.0	chr5	170744798	170744879	(10793380)	+	MER45A	DNA/hAT-Tip100	60	144	(34)	3294228
339	29.9	10.3	3.4	chr5	171388725	171388932	(10149327)	C	MIRb	SINE/MIR	(16)	252	29	3295187
1998	16.5	23.6	1.9	chr5	171413517	171414005	(10124254)	C	Tigger3	DNA/TcMar-Tigger	(1)	3028	2415	3295234
1998	15.2	29.4	0.9	chr5	171414278	171414704	(10123555)	C	Tigger3	DNA/TcMar-Tigger	(615)	2414	2147	3295234
2139	11.7	0.0	1.0	chr5	171414709	171415015	(10123244)	C	AluSx	SINE/Alu	(8)	304	1	3295236
14	9.6	10.4	3.8	chr5	171419420	171419467	(10118792)	+	(AGGC)n	Simple_repeat	1	53	(0)	3295243
346	30.5	10.2	3.9	chr5	171615167	171615395	(9922864)	C	MIRb	SINE/MIR	(21)	247	3	3295684
631	29.5	10.2	1.9	chr5	173314015	173314228	(8224031)	+	MIRb	SINE/MIR	11	244	(24)	3299404
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
2173	10.7	1.0	3.1	chr5	176525091	176525272	(5012987)	+	AluSz	SINE/Alu	134	312	(0)	3305463
314	15.6	9.2	15.6	chr5	176525273	176525314	(5012945)	C	AluYm1	SINE/Alu	(269)	42	1	3305461
2496	17.3	16.5	6.9	chr5	176525315	176525588	(5012671)	C	L1MD	LINE/L1	(1513)	4633	4370	3305456
1729	8.6	1.1	13.1	chr5	176526045	176526202	(5012057)	C	AluSz	SINE/Alu	(18)	294	152	3305467
2376	6.3	0.0	1.1	chr5	176526203	176526489	(5011770)	C	AluY	SINE/Alu	(18)	293	10	3305468
203	30.3	3.3	3.3	chr5	176535700	176535791	(5002468)	C	MIR	SINE/MIR	(102)	160	69	3305482
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
14	24.3	2.0	2.0	chr5	177455933	177455982	(4082277)	+	(GCCCT)n	Simple_repeat	1	51	(0)	3307453
17	13.5	0.0	0.0	chr5	177497383	177497415	(4040844)	+	(GGCGGG)n	Simple_repeat	1	33	(0)	3307530
308	27.6	21.6	1.9	chr5	178210328	178210534	(3327725)	+	MIRb	SINE/MIR	6	264	(4)	3308803
286	11.6	0.0	0.0	chr5	179612705	179612747	(1925512)	+	LTR6A	LTR/ERV1	1	43	(521)	3311198
3308	11.0	4.1	0.7	chr5	179612749	179613289	(1924970)	+	LTR6A	LTR/ERV1	5	564	(0)	3311199
1642	13.8	4.4	1.7	chr5	179613515	179613803	(1924456)	+	AluSx1	SINE/Alu	1	297	(15)	3311200
13	7.5	0.0	8.8	chr5	179733063	179733096	(1805163)	+	(CCGGCC)n	Simple_repeat	1	34	(0)	3311472
12	24.9	5.8	0.0	chr5	179796340	179796391	(1741868)	+	(CGCGCCG)n	Simple_repeat	1	55	(0)	3311605
1391	18.9	9.4	5.1	chr5	180050159	180050585	(1487674)	C	MLT2B4	LTR/ERVL	(182)	374	1	3311985
790	22.6	5.2	1.4	chr5	180050587	180050807	(1487452)	C	L1MEd	LINE/L1	(5414)	1943	1656	3311983
4377	16.9	14.6	3.1	chr5	181069831	181070864	(467395)	C	MER52C	LTR/ERV1	(105)	1173	1	3313602
190	19.4	7.7	11.1	chr6	2952809	2952889	(167853090)	C	MamRTE1	LINE/RTE-BovB	(1252)	2560	2483	3318154
2693	15.1	5.0	2.8	chr6	3147602	3148141	(167657838)	C	MLT2B4	LTR/ERVL	(2)	554	1	3318476
11	13.2	5.7	2.7	chr6	3227708	3227742	(167578237)	+	(CAGCCCC)n	Simple_repeat	1	37	(0)	3318604
4699	12.4	4.4	1.2	chr6	6694476	6695231	(164110748)	C	LTR1	LTR/ERV1	(2)	781	1	3323769
23800	7.5	1.3	0.3	chr6	11298871	11304963	(159501016)	+	L1PA6	LINE/L1	6	6149	(5)	3331028
2650	21.6	0.6	5.1	chr6	14012187	14012550	(156793429)	C	MLT2B3	LTR/ERVL	(200)	354	5	3335297
664	28.1	9.9	7.0	chr6	15211128	15211247	(155594732)	C	L2a	LINE/L2	(593)	2826	2687	3337555
2348	10.1	0.7	0.0	chr6	15211248	15211555	(155594424)	+	AluSc8	SINE/Alu	2	311	(0)	3337558
2160	9.2	1.0	6.8	chr6	15342926	15343250	(155462729)	+	AluSq2	SINE/Alu	1	306	(7)	3337818
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
2593	17.9	3.1	2.0	chr6	19781831	19782333	(151023646)	C	MLT2B2	LTR/ERVL	(6)	509	1	3344911
2097	21.1	8.7	1.7	chr6	20070226	20070708	(150735271)	+	MLT2B1	LTR/ERVL	1	520	(0)	3345354
191	22.5	14.0	1.2	chr6	21601960	21602040	(149203939)	+	MIRb	SINE/MIR	161	253	(15)	3347927
781	18.4	0.0	0.0	chr6	24359617	24359730	(146446249)	+	AluJo	SINE/Alu	3	116	(196)	3351759
16	8.3	0.0	0.0	chr6	24359731	24359756	(146446223)	+	(GGAA)n	Simple_repeat	1	26	(0)	3351760
327	25.9	2.4	10.3	chr6	24521235	24521419	(146284560)	C	MIR3	SINE/MIR	(9)	199	30	3352087
1887	18.0	14.8	0.7	chr6	25060679	25061072	(145744907)	+	MLT2B2	LTR/ERVL	1	462	(53)	3353022
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
940	15.3	3.7	0.0	chr6	26032506	26032662	(144773317)	+	AluJr4	SINE/Alu	134	296	(16)	3354517
1710	10.9	11.9	1.1	chr6	26104525	26104800	(144701179)	+	AluSz	SINE/Alu	2	311	(1)	3354639
491	27.6	10.6	8.2	chr6	26122929	26123343	(144682636)	C	MER101	LTR/ERV1	(36)	438	13	3354667
1789	13.0	1.4	4.2	chr6	26125325	26125609	(144680370)	+	AluSx	SINE/Alu	15	291	(21)	3354668
1555	15.6	1.1	1.8	chr6	26188288	26188562	(144617417)	+	AluSz6	SINE/Alu	1	273	(39)	3354799
2009	12.2	0.7	1.6	chr6	26198329	26198631	(144607348)	C	AluSg	SINE/Alu	(10)	300	1	3354813
951	23.8	2.9	1.2	chr6	26215623	26215862	(144590117)	C	AluJr	SINE/Alu	(47)	265	22	3354841
1477	15.7	7.1	0.0	chr6	26215900	26216148	(144589831)	C	AluSq2	SINE/Alu	(22)	291	24	3354842
2058	10.3	2.1	0.0	chr6	26241116	26241397	(144564582)	C	AluSp	SINE/Alu	(25)	288	1	3354877
306	19.2	0.0	15.2	chr6	26252207	26252305	(144553674)	C	AluJo	SINE/Alu	(185)	127	44	3354892
229	16.2	0.0	0.0	chr6	26270364	26270400	(144535579)	C	MER5A	DNA/hAT-Charlie	(125)	64	28	3354933
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
50	0.0	0.0	0.0	chr6	27145296	27145338	(143660641)	+	(AC)n	Simple_repeat	1	43	(0)	3356366
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
788	0.0	0.0	0.0	chr6	27545689	27545770	(143260209)	+	tRNA-Ser-TCA_	tRNA	1	82	(3)	3357088
2277	12.7	0.0	0.9	chr6	27602220	27602534	(143203445)	C	AluSx1	SINE/Alu	(0)	312	1	3357201
595	0.0	0.0	22.2	chr6	27602568	27602675	(143203304)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357202
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
2117	11.6	0.7	0.0	chr6	27684096	27684397	(143121582)	C	AluSx1	SINE/Alu	(8)	304	1	3357368
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
2957	15.9	7.6	4.3	chr6	27837035	27837666	(142968313)	C	MER51D	LTR/ERV1	(2)	655	1	3357680
1479	18.2	7.1	0.4	chr6	27866035	27866308	(142939671)	+	AluJb	SINE/Alu	2	295	(17)	3357727
1918	7.4	1.9	0.8	chr6	27871264	27871519	(142934460)	C	AluSc8	SINE/Alu	(16)	295	37	3357737
230	2.6	20.8	0.0	chr6	27873483	27873520	(142932459)	+	LTR10B1	LTR/ERV1	210	257	(290)	3357740
2172	8.1	5.0	0.3	chr6	27892066	27892350	(142913629)	C	AluSc	SINE/Alu	(10)	299	1	3357784
1243	15.4	9.0	6.5	chr6	27892351	27892485	(142913494)	C	AluJr4	SINE/Alu	(178)	134	1	3357783
2178	12.1	1.0	0.3	chr6	27894136	27894440	(142911539)	C	AluSg4	SINE/Alu	(3)	307	1	3357785
27	0.0	6.1	0.0	chr6	28720586	28720618	(142085361)	+	(GTTTT)n	Simple_repeat	1	35	(0)	3359089
2325	8.6	0.0	0.4	chr6	28720619	28720896	(142085083)	C	AluSc8	SINE/Alu	(33)	278	2	3359090
2020	12.1	2.0	1.4	chr6	28898431	28898727	(141907252)	C	AluSz	SINE/Alu	(12)	300	2	3359416
266	27.7	14.9	2.4	chr6	28898729	28898898	(141907081)	C	L1ME4a	LINE/L1	(658)	5466	5272	3359414
7587	11.5	2.2	0.4	chr6	29217264	29218361	(141587618)	+	THE1C-int	LTR/ERVL-MaLR	513	1631	(0)	3359886
18	20.3	0.0	0.0	chr6	30614692	30614726	(140191253)	+	(AC)n	Simple_repeat	1	35	(0)	3361894
391	24.4	4.7	0.0	chr6	30725854	30725935	(140080044)	C	AluJb	SINE/Alu	(79)	233	148	3362088
282	21.4	6.7	4.5	chr6	30726051	30726138	(140079841)	+	MER5A	DNA/hAT-Charlie	18	107	(82)	3362089
1172	13.6	4.4	15.2	chr6	30726257	30726552	(140079427)	+	AluJb	SINE/Alu	3	275	(37)	3362090
2019	11.8	1.3	1.0	chr6	30726553	30726857	(140079122)	C	AluSx1	SINE/Alu	(6)	306	1	3362091
2392	10.4	0.7	0.0	chr6	31160876	31161183	(139644796)	+	AluSg	SINE/Alu	1	310	(0)	3362939
47	0.0	0.0	0.0	chr6	31652321	31652360	(139153619)	+	(AC)n	Simple_repeat	1	40	(0)	3363672
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
2064	9.7	2.0	3.7	chr6	31839808	31840106	(138965873)	+	AluSc5	SINE/Alu	1	294	(15)	3363993
24	23.9	3.8	1.2	chr6	31897640	31897719	(138908260)	+	(GCC)n	Simple_repeat	1	83	(0)	3364122
4275	9.9	4.1	0.0	chr6	33117739	33118377	(137687602)	C	LTR9C	LTR/ERV1	(0)	666	1	3365862
12	17.0	9.2	4.2	chr6	33204797	33204861	(137601118)	+	(CTCTGACC)n	Simple_repeat	1	71	(0)	3365972
1584	12.8	14.2	0.0	chr6	33273976	33274217	(137531762)	C	AluSx1	SINE/Alu	(30)	282	1	3366119
1348	14.8	10.5	0.5	chr6	33274235	33274457	(137531522)	C	AluJb	SINE/Alu	(46)	266	19	3366120
39	27.9	2.1	2.0	chr6	34392500	34392642	(136413337)	+	(CCG)n	Simple_repeat	1	146	(0)	3368274
797	15.3	6.1	0.0	chr6	34415546	34415669	(136390310)	C	FLAM_A	SINE/Alu	(10)	132	1	3368335
1587	17.4	4.7	0.8	chr6	34415694	34415838	(136390141)	C	AluJb	SINE/Alu	(36)	276	134	3368336
26	0.0	0.0	0.0	chr6	34415839	34415863	(136390116)	+	(T)n	Simple_repeat	1	25	(0)	3368337
1587	17.4	4.7	0.8	chr6	34415864	34415982	(136389997)	C	AluJb	SINE/Alu	(193)	119	1	3368336
238	25.3	14.1	0.0	chr6	34417687	34417765	(136388214)	+	MIRc	SINE/MIR	61	152	(116)	3368341
400	29.4	12.4	1.3	chr6	34417918	34418101	(136387878)	C	MIR	SINE/MIR	(46)	222	19	3368342
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
659	21.3	12.3	0.0	chr6	35471142	35471291	(135334688)	C	AluSp	SINE/Alu	(16)	297	127	3370448
2110	8.7	2.7	0.7	chr6	35471455	35471741	(135334238)	C	AluY	SINE/Alu	(17)	294	2	3370449
279	21.5	13.1	3.8	chr6	35472387	35472550	(135333429)	+	MIRb	SINE/MIR	4	170	(38)	3370451
181	29.9	1.5	1.5	chr6	35473347	35473414	(135332565)	+	MIRc	SINE/MIR	60	127	(141)	3370454
12	30.3	1.4	4.2	chr6	35921106	35921175	(134884804)	+	(CCCGCC)n	Simple_repeat	1	71	(0)	3371442
2049	10.8	3.7	0.0	chr6	36608167	36608454	(134197525)	+	AluSp	SINE/Alu	1	299	(14)	3372900
2168	14.1	0.0	0.7	chr6	36611627	36611931	(134194048)	+	AluSx1	SINE/Alu	1	303	(9)	3372910
8298	11.2	8.3	1.9	chr6	36611953	36612168	(134193811)	+	Tigger1	DNA/TcMar-Tigger	863	1086	(1332)	3372911
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
590	31.1	5.0	4.0	chr6	40242926	40243124	(130562855)	+	LTR33	LTR/ERVL	235	438	(77)	3379111
2522	16.2	9.9	0.4	chr6	40243125	40243530	(130562449)	+	MLT2B2	LTR/ERVL	1	454	(61)	3379112
414	25.7	13.8	0.0	chr6	41009995	41010138	(129795841)	C	L2c	LINE/L2	(1)	3425	3259	3380471
2257	23.1	2.7	2.9	chr6	41010153	41010662	(129795317)	+	MLT2B3	LTR/ERVL	1	514	(40)	3380472
378	27.9	8.0	0.0	chr6	41966029	41966132	(128839847)	+	MIRb	SINE/MIR	87	199	(69)	3382199
1137	17.1	4.8	0.5	chr6	41966235	41966433	(128839546)	+	AluJr	SINE/Alu	90	297	(15)	3382200
1387	19.2	7.4	6.1	chr6	42541039	42541471	(128264508)	C	MLT2B1	LTR/ERVL	(24)	543	1	3383480
2608	25.4	7.8	4.0	chr6	42541472	42542423	(128263556)	+	HAL1	LINE/L1	974	1980	(527)	3383476
17	11.1	0.0	0.0	chr6	43454843	43454871	(127351108)	+	(GGAC)n	Simple_repeat	1	29	(0)	3385384
13	4.9	0.0	4.3	chr6	43667682	43667704	(127138275)	+	(CCT)n	Simple_repeat	1	23	(0)	3385799
1517	19.1	6.4	0.7	chr6	44249075	44249352	(126556627)	+	AluJb	SINE/Alu	1	295	(17)	3386853
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
1191	23.5	8.7	6.9	chr6	51925361	51925438	(118880541)	+	MLT2B1	LTR/ERVL	1	73	(447)	3397728
44	2.4	0.0	0.0	chr6	51925439	51925480	(118880499)	+	(GT)n	Simple_repeat	1	42	(0)	3397729
1191	23.2	8.1	5.2	chr6	51925481	51925772	(118880207)	+	MLT2B1	LTR/ERVL	74	431	(123)	3397728
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
269	13.7	17.1	0.0	chr6	73511854	73511926	(97294053)	+	MIRc	SINE/MIR	106	193	(75)	3423629
1465	18.6	3.2	3.5	chr6	73511983	73512293	(97293686)	+	AluJo	SINE/Alu	1	310	(2)	3423630
2220	11.0	0.0	0.0	chr6	73512772	73513061	(97292918)	+	AluSc	SINE/Alu	1	290	(19)	3423633
415	28.0	14.1	1.8	chr6	73513209	73513481	(97292498)	+	L2a	LINE/L2	3111	3422	(4)	3423635
845	18.7	17.5	0.0	chr6	73515442	73515639	(97290340)	+	AluJb	SINE/Alu	53	292	(20)	3423642
1713	12.6	10.0	0.0	chr6	73516333	73516594	(97289385)	+	AluSp	SINE/Alu	1	291	(22)	3423643
8808	19.1	1.2	1.7	chr6	78569354	78570925	(92235054)	C	MSTA-int	LTR/ERVL-MaLR	(71)	1580	5	3430144
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
270	22.9	0.0	0.0	chr6	85669982	85670042	(85135937)	+	Charlie13a	DNA/hAT-Charlie	842	902	(612)	3439415
205	28.2	13.1	1.1	chr6	85670044	85670211	(85135768)	+	L2a	LINE/L2	2857	3120	(306)	3439416
432	31.9	7.4	3.0	chr6	85672520	85672602	(85133377)	C	Charlie13a	DNA/hAT-Charlie	(78)	1436	1345	3439425
1594	16.1	6.3	1.1	chr6	85672603	85672887	(85133092)	C	AluJr	SINE/Alu	(11)	301	1	3439426
710	24.1	11.3	1.4	chr6	85674114	85674336	(85131643)	+	L2	LINE/L2	2216	2463	(956)	3439427
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
25767	3.7	0.5	0.0	chr6	87323279	87329278	(83476701)	C	L1PA3	LINE/L1	(0)	6155	125	3441373
13	23.5	0.0	0.0	chr6	89412325	89412359	(81393620)	+	(CGCG)n	Simple_repeat	1	35	(0)	3444715
12	10.1	9.4	0.0	chr6	90284201	90284232	(80521747)	+	A-rich	Low_complexity	1	35	(0)	3446154
332	31.2	12.0	4.6	chr6	93820521	93820878	(76985101)	C	MLT1F	LTR/ERVL-MaLR	(115)	433	49	3450575
773	36.5	8.2	1.3	chr6	93822292	93822746	(76983233)	+	L2	LINE/L2	2561	3049	(370)	3450577
3978	28.0	6.7	6.2	chr6	93822820	93824497	(76981482)	C	L1MEf	LINE/L1	(1199)	5120	3522	3450578
1519	21.0	1.7	3.6	chr6	93824498	93824633	(76981346)	+	MLT1A0	LTR/ERVL-MaLR	5	139	(226)	3450579
2896	1.0	0.0	0.0	chr6	93824634	93824936	(76981043)	C	AluYa5	SINE/Alu	(8)	303	1	3450580
1519	21.0	1.7	3.6	chr6	93824937	93825164	(76980815)	+	MLT1A0	LTR/ERVL-MaLR	140	362	(3)	3450579
2775	15.6	3.4	0.4	chr6	93828179	93828668	(76977311)	+	L1PA17	LINE/L1	5541	6045	(121)	3450583
4957	14.5	4.8	0.5	chr6	93828931	93829631	(76976348)	C	L1P3	LINE/L1	(1739)	4407	3688	3450584
9188	13.5	4.5	4.4	chr6	94690379	94691956	(76114023)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3451640
1230	19.6	11.6	3.2	chr6	95839289	95839602	(74966377)	C	MLT2B4	LTR/ERVL	(112)	444	1	3452949
883	24.0	1.8	1.3	chr6	95839635	95839858	(74966121)	C	LTR55	LTR/ERVL?	(323)	225	1	3452950
20668	9.1	0.9	2.7	chr6	97779950	97782999	(73022980)	+	HERVH-int	LTR/ERV1	1	2995	(4718)	3455484
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
660	16.4	6.0	0.0	chr6	106969162	106969271	(63836708)	+	AluJo	SINE/Alu	1	117	(195)	3467855
13	7.5	7.1	0.0	chr6	106969279	106969306	(63836673)	+	(TAGA)n	Simple_repeat	1	30	(0)	3467856
271	24.6	4.4	2.0	chr6	106969348	106969446	(63836533)	+	L2b	LINE/L2	3029	3130	(245)	3467857
529	17.1	0.0	0.0	chr6	106969447	106969528	(63836451)	+	AluSz6	SINE/Alu	230	311	(1)	3467858
732	13.2	5.6	8.7	chr6	109855549	109855697	(60950282)	+	LTR54B	LTR/ERV1	1	144	(366)	3472772
535	14.7	0.0	0.0	chr6	109855700	109855774	(60950205)	+	AluSq10	SINE/Alu	5	79	(234)	3472773
2740	8.6	8.9	0.5	chr6	109855775	109856184	(60949795)	C	LTR7	LTR/ERV1	(2)	448	1	3472774
18621	5.1	1.0	0.3	chr6	111505513	111507862	(59298117)	C	L1P2	LINE/L1	(3794)	2352	1	3475722
2032	24.4	7.8	2.2	chr6	112755926	112756566	(58049413)	C	L1ME1	LINE/L1	(0)	6352	5673	3477533
3173	16.5	0.8	0.2	chr6	112756569	112757073	(58048906)	+	MLT2B1	LTR/ERVL	5	512	(8)	3477534
209	29.8	0.0	8.1	chr6	114419077	114419138	(56386841)	C	MER91A	DNA/hAT-Tip100	(1)	195	139	3480103
465	32.8	17.0	2.4	chr6	118636220	118636482	(52169497)	+	L4_B_Mam	LINE/RTE-X	3724	4000	(941)	3485421
2088	18.0	16.2	1.9	chr6	118636483	118636957	(52169022)	+	MLT2B4	LTR/ERVL	1	556	(0)	3485426
2074	20.5	10.9	1.3	chr6	120924010	120924474	(49881505)	C	MLT2B2	LTR/ERVL	(0)	515	1	3488349
1686	10.8	11.7	0.0	chr6	121450284	121450532	(49355447)	+	AluSp	SINE/Alu	21	302	(11)	3489005
2623	20.4	4.2	0.9	chr6	126605250	126605783	(44200196)	+	MLT2B4	LTR/ERVL	1	552	(4)	3495827
966	28.6	8.4	6.6	chr6	131301912	131302067	(39503912)	+	L1ME4b	LINE/L1	145	291	(601)	3502134
3237	8.7	1.8	3.8	chr6	131302068	131302452	(39503527)	+	MLT2A1	LTR/ERVL	1	383	(61)	3502136
2099	19.1	16.8	3.9	chr6	131344895	131345503	(39460476)	C	MER39	LTR/ERV1	(0)	707	5	3502179
2212	11.6	0.0	0.0	chr6	131345633	131345917	(39460062)	C	AluSz	SINE/Alu	(27)	285	1	3502180
2902	15.9	4.6	0.4	chr6	131345937	131346459	(39459520)	+	MER34A1	LTR/ERV1	9	554	(33)	3502181
20	0.0	0.0	0.0	chr6	131350266	131350287	(39455692)	+	(A)n	Simple_repeat	1	22	(0)	3502186
2137	15.8	7.4	1.6	chr6	131909434	131909876	(38896103)	+	L1MB2	LINE/L1	5686	6156	(15)	3503091
5448	22.1	7.6	6.8	chr6	131911032	131912762	(38893217)	C	L1MD2	LINE/L1	(0)	6359	4657	3503095
4889	20.0	6.1	0.9	chr6	131918253	131919316	(38886663)	+	L1PA13	LINE/L1	17	1139	(5646)	3503105
6165	10.1	0.9	0.5	chr6	131921045	131921989	(38883990)	+	L1MA1	LINE/L1	5354	6302	(0)	3503104
429	34.2	8.8	1.9	chr6	131947040	131947304	(38858675)	C	MamRTE1	LINE/RTE-BovB	(28)	3784	3500	3503154
14	17.6	2.5	2.4	chr6	131950864	131950903	(38855076)	+	(GCCGCA)n	Simple_repeat	1	41	(0)	3503156
13	16.8	0.0	5.4	chr6	131950933	131950969	(38855010)	+	(GCCCG)n	Simple_repeat	1	37	(0)	3503157
2173	17.3	4.4	0.7	chr6	132664435	132664873	(38141106)	C	MLT2B4	LTR/ERVL	(56)	464	1	3504123
1115	12.3	10.5	0.0	chr6	132664874	132665060	(38140919)	+	MER67C	LTR/ERV1	503	711	(0)	3504122
1759	13.2	5.0	1.1	chr6	132817994	132818265	(37987714)	C	AluSq2	SINE/Alu	(30)	283	1	3504378
1715	11.8	12.9	0.4	chr6	132818862	132819132	(37986847)	C	AluSx	SINE/Alu	(2)	310	1	3504380
16	17.6	0.0	0.0	chr6	132821517	132821545	(37984434)	+	(T)n	Simple_repeat	1	29	(0)	3504384
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
14	11.7	8.1	0.0	chr6	142926996	142927032	(27878947)	+	(GCGGC)n	Simple_repeat	1	40	(0)	3519160
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
2823	17.2	1.2	0.8	chr6	144855865	144856374	(25949605)	C	MLT2B1	LTR/ERVL	(8)	512	1	3521970
1794	17.6	3.0	4.5	chr6	150269234	150269685	(20536294)	+	MLT2B4	LTR/ERVL	1	414	(0)	3529944
15	3.5	3.0	5.9	chr6	151390283	151390315	(19415664)	+	(CCGGGG)n	Simple_repeat	1	34	(0)	3531906
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
415	21.9	22.9	2.1	chr6	152969684	152969921	(17836058)	+	L1ME1	LINE/L1	5874	6175	(177)	3534271
346	22.9	13.5	0.0	chr6	152969925	152970033	(17835946)	C	MLT1F-int	LTR/ERVL-MaLR	(725)	764	639	3534275
11805	9.1	0.9	0.2	chr6	155236921	155238466	(15567513)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	18	3537853
2087	20.0	5.1	9.6	chr6	156739772	156740303	(14065676)	C	MLT2B1	LTR/ERVL	(13)	507	1	3539923
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
14	9.0	5.1	4.9	chr6	158560180	158560218	(12245761)	+	G-rich	Low_complexity	1	41	(0)	3542742
19	25.5	1.1	6.6	chr6	158644770	158644859	(12161120)	+	(GCCCC)n	Simple_repeat	1	91	(0)	3542863
2967	16.3	10.5	1.0	chr6	163122924	163123525	(7682454)	C	LTR9C	LTR/ERV1	(0)	666	1	3549055
36	5.0	0.0	0.0	chr6	163414675	163414716	(7391263)	+	(GAG)n	Simple_repeat	1	42	(0)	3549419
13	14.7	3.3	0.0	chr6	163414729	163414758	(7391221)	+	(GCG)n	Simple_repeat	1	31	(0)	3549420
20	27.9	1.3	1.3	chr6	163414841	163414930	(7391049)	+	(CGCCCGC)n	Simple_repeat	1	90	(0)	3549421
24	24.4	3.3	2.1	chr6	166627080	166627169	(4178810)	+	(GGCGCGG)n	Simple_repeat	1	93	(0)	3553461
2583	15.5	11.3	2.4	chr6	166991408	166991908	(3814071)	+	MLT2B4	LTR/ERVL	6	556	(0)	3553881
27	23.6	5.3	2.5	chr7	149147	149260	(159196713)	+	(GCCTGC)n	Simple_repeat	1	120	(0)	3558013
14	17.6	0.0	0.0	chr7	726723	726754	(158619219)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3558809
1834	14.8	2.3	1.4	chr7	1569486	1569782	(157776191)	+	AluJr	SINE/Alu	1	300	(12)	3560095
12	14.3	4.8	4.5	chr7	1569883	1569924	(157776049)	+	(CCTCGG)n	Simple_repeat	1	44	(0)	3560096
749	11.3	12.0	0.8	chr7	5519786	5519918	(153826055)	+	AluJb	SINE/Alu	2	151	(161)	3567228
2112	13.9	0.3	0.0	chr7	5521038	5521332	(153824641)	C	AluSz	SINE/Alu	(15)	297	2	3567234
1590	19.0	5.0	1.7	chr7	5522271	5522440	(153823533)	+	AluJr	SINE/Alu	119	299	(13)	3567237
2211	12.3	0.0	1.0	chr7	5522443	5522751	(153823222)	+	AluSq2	SINE/Alu	2	307	(6)	3567239
2148	13.0	0.0	0.0	chr7	5522756	5523048	(153822925)	+	AluSx	SINE/Alu	16	308	(4)	3567240
946	20.9	0.0	0.0	chr7	5523359	5523516	(153822457)	+	AluJr	SINE/Alu	137	294	(18)	3567241
944	14.3	0.0	0.0	chr7	5523519	5523651	(153822322)	+	AluJr	SINE/Alu	1	133	(179)	3567242
2076	10.9	0.0	0.4	chr7	5523712	5523985	(153821988)	C	AluSx	SINE/Alu	(12)	300	28	3567243
521	17.7	5.0	0.0	chr7	5523986	5524064	(153821909)	C	AluSx	SINE/Alu	(231)	81	3	3567233
1717	14.2	2.4	0.0	chr7	5524473	5524761	(153821212)	C	MER1A	DNA/hAT-Charlie	(0)	529	234	3567245
255	26.9	0.0	0.0	chr7	5525340	5525406	(153820567)	C	L1MA10	LINE/L1	(64)	6270	6204	3567249
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
27	22.1	0.0	0.0	chr7	5525625	5525687	(153820286)	+	(ATGA)n	Simple_repeat	1	63	(0)	3567251
222	29.2	14.3	0.8	chr7	5532655	5532775	(153813198)	+	L2b	LINE/L2	3014	3153	(234)	3567257
16	28.7	2.5	3.6	chr7	5592618	5592698	(153753275)	+	(GGC)n	Simple_repeat	1	83	(0)	3567435
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
1519	7.5	4.2	0.8	chr7	6590230	6590483	(152755490)	+	Charlie17b	DNA/hAT-Charlie	158	420	(784)	3569753
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
10033	12.2	3.4	0.8	chr7	14775832	14777370	(144568603)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3580403
13	24.9	4.6	2.9	chr7	23474085	23474149	(135871824)	+	(GCCGC)n	Simple_repeat	1	68	(0)	3592403
241	25.4	0.0	3.3	chr7	24405355	24405415	(134940558)	+	L1ME3G	LINE/L1	583	641	(283)	3593818
306	32.4	8.9	1.7	chr7	24408258	24408433	(134937540)	+	L3b	LINE/CR1	4926	5115	(117)	3593823
640	21.0	5.4	1.9	chr7	24409807	24409966	(134936007)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3593824
1679	16.6	4.2	0.4	chr7	26182810	26183086	(133162887)	C	AluJo	SINE/Alu	(24)	288	1	3596574
448	25.0	37.2	6.5	chr7	26183087	26183265	(133162708)	+	L1MEi	LINE/L1	1751	1972	(5131)	3596572
514	23.6	9.8	1.7	chr7	26187605	26187781	(133158192)	+	MER2	DNA/TcMar-Tigger	127	319	(26)	3596578
340	22.8	16.3	3.1	chr7	26189022	26189148	(133156825)	+	MLT1F2	LTR/ERVL-MaLR	406	552	(8)	3596579
16	4.0	0.0	6.7	chr7	26291981	26292010	(133053963)	+	(CGC)n	Simple_repeat	1	30	(0)	3596789
13	22.8	0.0	0.0	chr7	26292040	26292075	(133053898)	+	(GCCCG)n	Simple_repeat	1	36	(0)	3596790
2795	20.7	3.0	1.5	chr7	28891114	28891726	(130454247)	+	L1M2a	LINE/L1	13	635	(6533)	3600726
1806	19.0	6.0	1.9	chr7	29184352	29184822	(130161151)	C	MLT2B4	LTR/ERVL	(41)	676	163	3601188
11	23.9	6.1	0.0	chr7	33062650	33062698	(126283275)	+	(GCGCTC)n	Simple_repeat	1	52	(0)	3607294
2004	20.6	8.2	4.8	chr7	37025373	37025895	(122320078)	+	MLT2B1	LTR/ERVL	6	520	(36)	3613160
433	26.6	15.6	3.0	chr7	37284809	37285109	(122060864)	+	LTR41C	LTR/ERVL	5	335	(433)	3613514
15	0.0	0.0	0.0	chr7	39949858	39949876	(119396097)	+	(GGC)n	Simple_repeat	1	19	(0)	3617484
1089	26.0	8.4	1.9	chr7	42554103	42554467	(116791506)	C	L2a	LINE/L2	(0)	3426	3036	3621396
912	13.7	2.0	0.0	chr7	42554475	42554620	(116791353)	+	MLT2B4	LTR/ERVL	1	149	(407)	3621397
4435	13.5	15.2	2.5	chr7	42554628	42555618	(116790355)	+	MER11B	LTR/ERVK	1	1236	(0)	3621398
12	29.2	0.0	3.7	chr7	42911707	42911760	(116434213)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3621832
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
327	24.0	14.3	0.4	chr7	44122976	44123234	(115222739)	+	Charlie5	DNA/hAT-Charlie	2377	2624	(0)	3623833
44	27.5	3.3	4.1	chr7	44325726	44325936	(115020037)	+	(CACCTG)n	Simple_repeat	1	218	(0)	3624064
2245	9.6	1.4	0.7	chr7	44805447	44805739	(114540234)	+	AluSx	SINE/Alu	1	295	(17)	3624902
2245	11.2	0.0	0.3	chr7	44805753	44806055	(114539918)	+	AluSx	SINE/Alu	7	308	(4)	3624903
31	18.7	4.1	3.9	chr7	44847977	44848074	(114497899)	+	(CGC)n	Simple_repeat	1	102	(0)	3625016
2387	15.5	12.4	7.2	chr7	47585495	47585898	(111760075)	+	MLT2B2	LTR/ERVL	1	458	(57)	3628710
870	18.7	4.5	0.6	chr7	50982928	50983099	(108362874)	+	MLT2B4	LTR/ERVL	20	198	(358)	3633047
409	22.9	7.8	1.5	chr7	51326908	51327040	(108018933)	C	MamGypLTR3	LTR/Gypsy	(53)	841	700	3633497
2097	12.5	0.0	0.3	chr7	56000489	56000776	(103345197)	+	AluJb	SINE/Alu	1	287	(25)	3639676
2263	9.4	0.7	0.0	chr7	56000786	56001072	(103344901)	+	AluSx1	SINE/Alu	1	289	(23)	3639677
1806	14.7	3.7	3.0	chr7	67392669	67393065	(91952908)	+	LTR9A1	LTR/ERV1	256	728	(0)	3652117
2744	16.3	4.3	0.2	chr7	69061779	69062256	(90283717)	C	MLT2B4	LTR/ERVL	(56)	500	2	3655840
437	19.2	2.9	1.0	chr7	69062260	69062359	(90283614)	C	L1MD2	LINE/L1	(433)	5926	5825	3655842
1813	16.8	0.0	1.4	chr7	72284009	72284300	(87061673)	+	AluJr	SINE/Alu	1	288	(24)	3661999
1774	22.3	8.7	3.9	chr7	72284360	72284821	(87061152)	+	MLT2B1	LTR/ERVL	1	488	(32)	3662000
14	25.8	2.1	0.0	chr7	72337022	72337068	(87008905)	+	(CCCGCT)n	Simple_repeat	1	48	(0)	3662110
13	21.1	0.0	6.1	chr7	72925188	72925236	(86420737)	+	(GGCCGG)n	Simple_repeat	1	49	(0)	3663374
343	31.1	10.4	1.1	chr7	73742730	73742911	(85603062)	C	MIRc	SINE/MIR	(58)	210	10	3665357
290	31.6	5.1	3.5	chr7	73833399	73833572	(85512401)	+	L2c	LINE/L2	2980	3156	(231)	3665587
21	18.3	0.0	0.0	chr7	74174225	74174268	(85171705)	+	(GCGT)n	Simple_repeat	1	44	(0)	3666407
12	12.0	3.7	0.0	chr7	75092733	75092759	(84253214)	+	(CGCGG)n	Simple_repeat	1	28	(0)	3668774
20	29.7	2.7	0.0	chr7	75092760	75092806	(84253167)	+	(CCG)n	Simple_repeat	2	77	(0)	3668775
592	16.6	0.0	1.9	chr7	75652978	75653098	(83692875)	+	MLT2B4	LTR/ERVL	1	113	(284)	3670153
1565	27.5	7.0	1.9	chr7	83465447	83465976	(75879997)	+	LTR82B	LTR/ERVL	184	742	(88)	3682297
1820	16.4	0.0	0.7	chr7	83467058	83467331	(75878642)	C	AluJb	SINE/Alu	(5)	307	36	3682299
1894	9.8	4.0	0.4	chr7	83469786	83470051	(75875922)	C	AluSc8	SINE/Alu	(1)	310	35	3682302
2768	15.8	4.8	0.4	chr7	87068688	87069184	(72276789)	C	MLT2B1	LTR/ERVL	(0)	520	1	3686731
389	33.5	4.1	5.6	chr7	87069189	87069384	(72276589)	+	MIRb	SINE/MIR	40	232	(36)	3686732
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
1785	21.7	3.3	0.0	chr7	89959647	89960024	(69385949)	C	MLT2B4	LTR/ERVL	(165)	391	1	3690431
1055	18.2	0.0	0.0	chr7	89960025	89960205	(69385768)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	5534	3690431
1543	12.9	2.4	11.0	chr7	99365305	99365630	(59980343)	+	AluJo	SINE/Alu	2	298	(14)	3704579
2206	11.7	0.0	1.3	chr7	100369568	100369867	(58976106)	+	AluSg	SINE/Alu	1	296	(14)	3706448
2287	10.7	0.0	0.3	chr7	100369883	100370191	(58975782)	+	AluSx1	SINE/Alu	1	308	(4)	3706449
13	29.4	0.0	0.0	chr7	100435798	100435843	(58910130)	+	(GCCCGCC)n	Simple_repeat	1	46	(0)	3706569
1867	10.2	6.8	1.5	chr7	100951031	100951294	(58394679)	C	AluSz	SINE/Alu	(33)	279	1	3707712
2713	20.7	6.9	5.8	chr7	101294039	101294597	(58051376)	C	LTR8A	LTR/ERV1	(150)	577	1	3708440
2736	27.4	8.9	4.8	chr7	101308329	101309221	(58036752)	+	L1M2	LINE/L1	2	1495	(5621)	3708475
416	28.8	9.1	1.8	chr7	104981134	104981296	(54364677)	C	MIR	SINE/MIR	(3)	259	84	3714955
1284	21.0	8.3	5.8	chr7	105601381	105601825	(53744148)	+	MLT1C	LTR/ERVL-MaLR	9	465	(2)	3716218
1295	20.6	8.7	2.4	chr7	106141725	106142086	(53203887)	C	MLT2B4	LTR/ERVL	(40)	357	3	3717162
333	29.1	9.3	8.8	chr7	106142092	106142272	(53203701)	C	MLT1K	LTR/ERVL-MaLR	(399)	196	15	3717163
12	29.0	2.0	0.0	chr7	111562247	111562296	(47783677)	+	(CACGCG)n	Simple_repeat	1	51	(0)	3724507
230	34.6	7.7	0.6	chr7	111771743	111771899	(47574074)	+	L2b	LINE/L2	2970	3138	(237)	3724821
10465	5.3	0.7	4.0	chr7	112696646	112698078	(46647895)	C	SVA_C	Retroposon/SVA	(0)	1384	1	3726180
1589	16.7	18.8	1.7	chr7	114248230	114248444	(45097529)	C	MLT2B4	LTR/ERVL	(326)	230	2	3728167
26387	2.0	0.5	0.0	chr7	116718498	116724489	(42621484)	C	L1PA2	LINE/L1	(6)	6149	130	3731463
1500	17.3	1.1	1.5	chr7	121476269	121476538	(37869435)	C	MLT2B1	LTR/ERVL	(248)	272	4	3737736
459	25.4	3.5	0.0	chr7	121476542	121476679	(37869294)	C	L1MC4a	LINE/L1	(73)	7809	7667	3737738
853	24.8	4.5	0.5	chr7	122072386	122072600	(37273373)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	3738591
13	8.5	0.0	3.7	chr7	122144145	122144171	(37201802)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3738703
20	22.7	0.0	0.0	chr7	123692527	123692577	(35653396)	+	(AGGCGG)n	Simple_repeat	1	51	(0)	3740813
15	16.5	3.2	7.7	chr7	123692602	123692664	(35653309)	+	(AGGTGG)n	Simple_repeat	1	65	(0)	3740814
21	16.1	0.0	5.6	chr7	123692782	123692835	(35653138)	+	GA-rich	Low_complexity	1	54	(0)	3740815
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
282	24.7	5.1	2.1	chr7	139434759	139434853	(19911120)	+	MIRc	SINE/MIR	2	99	(169)	3765587
305	32.7	7.8	4.7	chr7	139434859	139435097	(19910876)	C	MIRb	SINE/MIR	(1)	261	18	3765588
2359	5.5	3.7	0.0	chr7	148884977	148885265	(10460708)	C	AluSp	SINE/Alu	(13)	300	1	3779541
16	22.2	3.3	3.2	chr7	149126047	149126118	(10219855)	+	(CCAGGC)n	Simple_repeat	1	72	(0)	3780094
16	25.2	0.0	3.6	chr7	149147655	149147709	(10198264)	+	(CGG)n	Simple_repeat	1	55	(0)	3780152
613	4.2	0.0	0.0	chr7	149415138	149415209	(9930764)	C	tRNA-Cys-TGY	tRNA	(3)	72	1	3780660
14	22.9	9.0	1.2	chr7	151018766	151018843	(8327130)	+	(GCGCAG)n	Simple_repeat	1	85	(0)	3782791
1158	20.3	25.5	1.9	chr7	155201760	155202181	(4143792)	+	MLT2B4	LTR/ERVL	1	556	(0)	3789344
993	19.0	9.5	1.4	chr7	157310655	157311042	(2034931)	C	LTR54	LTR/ERV1	(5)	505	19	3792253
453	18.5	0.0	16.9	chr7	157311043	157311086	(2034887)	+	LTR62	LTR/ERVL	1	36	(673)	3792254
2060	12.6	1.7	0.0	chr7	157311087	157311371	(2034602)	+	AluSz	SINE/Alu	9	298	(14)	3792255
12	17.6	4.5	4.3	chr7	158705144	158705187	(640786)	+	GA-rich	Low_complexity	1	46	(0)	3793569
18	4.0	0.0	3.6	chr8	544659	544686	(144593950)	+	(GGC)n	Simple_repeat	1	28	(0)	3794932
14	11.5	0.0	3.3	chr8	544866	544895	(144593741)	+	(GGGCG)n	Simple_repeat	1	30	(0)	3794933
1874	19.6	10.2	0.7	chr8	13786862	13787271	(131351365)	C	MLT2B1	LTR/ERVL	(67)	453	1	3813163
9142	13.3	4.1	2.4	chr8	16320481	16321587	(128817049)	+	THE1C-int	LTR/ERVL-MaLR	487	1578	(2)	3816602
16	18.2	2.1	4.2	chr8	18387208	18387279	(126751357)	+	(CCG)n	Simple_repeat	1	70	(0)	3819563
12	16.3	2.8	2.7	chr8	19013517	19013552	(126125084)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	3820499
1945	18.6	8.3	1.7	chr8	23957792	23958207	(121180429)	C	MLT2B1	LTR/ERVL	(74)	446	1	3828783
12	26.3	0.0	5.5	chr8	24956547	24956601	(120182035)	+	GA-rich	Low_complexity	1	55	(0)	3830234
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
527	22.5	7.2	0.0	chr8	38066664	38066793	(107071843)	C	L2a	LINE/L2	(2)	3424	3235	3851576
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
269	27.9	7.6	3.1	chr8	38851048	38851175	(106287461)	C	UCON26	Unknown	(81)	262	66	3853065
2246	16.8	6.0	16.6	chr8	40925894	40926470	(104212166)	+	MLT2B2	LTR/ERVL	1	512	(3)	3856124
1364	14.4	0.4	10.6	chr8	41528480	41528771	(103609865)	+	AluJr	SINE/Alu	35	296	(16)	3857156
15	25.2	1.2	7.3	chr8	42153361	42153441	(102985195)	+	(GCGCCT)n	Simple_repeat	1	82	(0)	3858238
13	13.4	9.8	0.0	chr8	47738002	47738042	(97400594)	+	(CCCGG)n	Simple_repeat	1	45	(0)	3862328
4141	14.4	23.4	1.8	chr8	47765223	47766183	(97372453)	+	MER11B	LTR/ERVK	1	1232	(4)	3862368
843	22.1	7.9	4.0	chr8	47978592	47978741	(97159895)	C	MER47A	DNA/TcMar-Tigger	(56)	310	165	3862696
1883	13.9	1.7	1.1	chr8	47978742	47979028	(97159608)	+	AluSx1	SINE/Alu	1	289	(23)	3862697
25	12.2	0.0	0.0	chr8	49911552	49911588	(95227048)	+	(A)n	Simple_repeat	1	37	(0)	3865001
3502	6.0	6.2	0.2	chr8	53326715	53327195	(91811441)	+	MER9a3	LTR/ERVK	1	512	(0)	3869366
15	22.0	1.7	5.1	chr8	55102738	55102795	(90035841)	+	(GCTGG)n	Simple_repeat	1	59	(0)	3871976
1713	15.8	7.1	0.6	chr8	56069791	56070108	(89068528)	+	MER2	DNA/TcMar-Tigger	6	345	(0)	3873488
280	15.9	11.3	0.0	chr8	56070241	56070303	(89068333)	C	MIR	SINE/MIR	(96)	166	96	3873489
20	13.9	2.0	3.9	chr8	60678498	60678548	(84460088)	+	(GGCCCGC)n	Simple_repeat	1	52	(0)	3879588
41249	10.2	3.5	0.7	chr8	65863622	65870079	(79268557)	+	HERVH48-int	LTR/ERV1	1	6647	(7)	3886535
1901	12.8	6.7	0.0	chr8	66920239	66920519	(78218117)	C	AluSx	SINE/Alu	(10)	302	2	3888368
1131	22.2	7.5	0.0	chr8	66920694	66920963	(78217673)	C	AluJr	SINE/Alu	(19)	293	2	3888369
701	19.3	3.6	0.0	chr8	66921251	66921385	(78217251)	+	L1PB4	LINE/L1	6005	6144	(12)	3888372
290	29.4	16.2	7.6	chr8	67955410	67955748	(77182888)	+	L2c	LINE/L2	2994	3387	(0)	3890064
381	30.6	0.9	16.1	chr8	71684185	71684457	(73454179)	+	L2b	LINE/L2	3057	3287	(88)	3895537
334	30.1	6.2	12.1	chr8	71687216	71687333	(73451303)	+	MIRb	SINE/MIR	160	260	(8)	3895540
400	25.5	0.9	0.0	chr8	71687416	71687521	(73451115)	C	MER5A1	DNA/hAT-Charlie	(58)	108	2	3895542
346	27.0	3.7	4.1	chr8	71706573	71706774	(73431862)	C	MER102b	DNA/hAT-Charlie	(28)	303	108	3895566
2326	10.0	1.3	0.0	chr8	71706777	71707075	(73431561)	+	AluSg	SINE/Alu	1	303	(7)	3895567
217	28.6	1.2	9.7	chr8	71707962	71708054	(73430582)	C	MIR	SINE/MIR	(112)	150	66	3895568
1912	15.2	4.3	0.0	chr8	71708786	71709120	(73429516)	C	MLT1B	LTR/ERVL-MaLR	(11)	379	30	3895569
11183	10.9	3.7	0.8	chr8	72990356	72991890	(72146746)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3897206
28	0.0	0.0	0.0	chr8	73009049	73009074	(72129562)	+	(GAG)n	Simple_repeat	1	26	(0)	3897250
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
2196	19.8	7.7	3.6	chr8	80956390	80956887	(64181749)	C	MLT2B1	LTR/ERVL	(0)	520	1	3908639
1892	22.0	6.1	2.1	chr8	83063931	83064353	(62074283)	+	HERV4_I-int	LTR/ERV1	60	500	(6039)	3911427
2562	7.4	0.0	0.0	chr8	93722985	93723295	(51415341)	C	AluYf1	SINE/Alu	(0)	311	1	3925689
16	18.5	0.0	2.6	chr8	95133990	95134028	(50004608)	+	(CGC)n	Simple_repeat	1	39	(0)	3928265
14	19.1	0.0	6.4	chr8	97644083	97644129	(47494507)	+	(GCCCC)n	Simple_repeat	1	47	(0)	3932076
15	24.2	3.6	1.8	chr8	97775888	97775942	(47362694)	+	(GGC)n	Simple_repeat	1	57	(0)	3932412
12	19.6	0.0	0.0	chr8	100510389	100510417	(44628219)	+	(CAGGA)n	Simple_repeat	1	29	(0)	3936921
2235	13.3	1.8	2.6	chr8	100655339	100655685	(44482951)	+	THE1B	LTR/ERVL-MaLR	1	344	(20)	3937185
21	21.2	3.3	6.3	chr8	100722185	100722276	(44416360)	+	GA-rich	Low_complexity	1	95	(0)	3937327
13	28.1	1.7	3.3	chr8	100722203	100722314	(44416322)	+	G-rich	Low_complexity	1	110	(0)	3937328
16	8.7	0.0	0.0	chr8	100951980	100952004	(44186632)	+	(GGC)n	Simple_repeat	1	25	(0)	3937835
2171	12.4	0.3	0.0	chr8	102249329	102249619	(42889017)	+	AluSx1	SINE/Alu	1	292	(20)	3940025
13	21.2	2.1	4.2	chr8	102655686	102655732	(42482904)	+	(CGC)n	Simple_repeat	1	48	(0)	3940827
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
696	31.7	7.4	4.8	chr8	102717366	102717481	(42421155)	+	LTR16C	LTR/ERVL	111	220	(269)	3940966
2582	16.1	10.5	0.2	chr8	102717482	102717943	(42420693)	+	MLT2B2	LTR/ERVL	1	515	(0)	3940968
11	24.7	4.0	1.9	chr8	109539801	109539850	(35598786)	+	(GCGAGC)n	Simple_repeat	1	52	(0)	3950981
15	20.7	5.1	0.0	chr8	109539836	109539874	(35598762)	+	(GC)n	Simple_repeat	1	41	(0)	3950982
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
386	36.8	3.7	4.3	chr8	114296044	114296344	(30842292)	C	L2a	LINE/L2	(159)	3267	2969	3957182
1846	15.7	25.0	0.5	chr8	122746739	122747154	(22391482)	C	MLT2B4	LTR/ERVL	(4)	552	1	3970455
1699	22.1	6.9	5.0	chr8	122747191	122747685	(22390951)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3970456
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
38	17.2	4.8	2.7	chr8	123160412	123160516	(21978120)	+	GA-rich	Low_complexity	1	110	(0)	3971287
313	30.7	6.5	6.2	chr8	124355688	124355993	(20782643)	+	L1MCb	LINE/L1	66	372	(5673)	3973550
261	11.1	0.0	8.5	chr8	124688157	124688215	(20450421)	+	MER4-int	LTR/ERV1	1112	1165	(5433)	3974135
90	22.5	2.9	0.0	chr8	124688216	124688423	(20450213)	+	(TG)n	Simple_repeat	1	214	(0)	3974136
27744	2.4	0.0	0.0	chr8	126799618	126805646	(18332990)	C	L1PA2	LINE/L1	(2)	6153	124	3978213
13	11.8	2.3	8.9	chr8	128104813	128104856	(17033780)	+	(TCTCC)n	Simple_repeat	1	45	(0)	3980801
415	29.9	1.9	5.4	chr8	128104869	128105034	(17033602)	+	MIRb	SINE/MIR	87	246	(22)	3980802
368	35.4	5.3	3.9	chr8	128105023	128105228	(17033408)	+	MIR	SINE/MIR	20	228	(34)	3980803
231	36.3	1.1	0.0	chr8	130408065	130408155	(14730481)	+	L2c	LINE/L2	3114	3205	(182)	3984961
2789	14.7	5.4	4.4	chr8	130408180	130408679	(14729957)	+	MLT2B1	LTR/ERVL	5	510	(10)	3984962
261	28.1	7.7	1.0	chr8	131316391	131316487	(13822149)	+	MIRb	SINE/MIR	55	158	(110)	3986647
202	18.7	6.2	1.8	chr8	132057786	132057870	(13080766)	C	MIR3	SINE/MIR	(89)	179	89	3987835
307	32.7	15.1	2.0	chr8	132073667	132074121	(13064515)	+	L2	LINE/L2	2443	2967	(452)	3987864
50	21.0	3.0	4.1	chr8	135457318	135457503	(9681133)	+	(GGCGGCG)n	Simple_repeat	1	183	(0)	3994055
13	9.8	9.1	0.0	chr8	135457598	135457630	(9681006)	+	(CGCCCG)n	Simple_repeat	1	36	(0)	3994056
13	21.5	3.4	4.9	chr8	141128648	141128706	(4009930)	+	G-rich	Low_complexity	1	61	(0)	4003237
15	31.1	0.0	1.6	chr8	142727285	142727345	(2411291)	+	(CGCCGC)n	Simple_repeat	1	61	(0)	4005232
21	28.1	4.3	1.0	chr8	143430634	143430725	(1707911)	+	(CCG)n	Simple_repeat	1	96	(0)	4006205
24	18.1	1.5	4.3	chr8	143840756	143840823	(1297813)	+	(CGCTCC)n	Simple_repeat	1	69	(0)	4006731
12	17.6	3.1	0.0	chr8	143840799	143840830	(1297806)	+	(CCGGCG)n	Simple_repeat	1	33	(0)	4006732
892	14.1	1.4	1.4	chr8	144094442	144094583	(1044053)	C	AluJb	SINE/Alu	(24)	288	147	4007099
25	31.3	1.7	2.5	chr8	144478236	144478354	(660282)	+	GA-rich	Low_complexity	1	121	(0)	4007652
15	24.4	0.0	6.2	chr8	144500393	144500457	(638179)	+	G-rich	Low_complexity	1	65	(0)	4007691
20	12.3	1.6	9.2	chr8	144524888	144524951	(613685)	+	(GCAGCG)n	Simple_repeat	1	65	(0)	4007705
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
411	15.9	5.8	2.3	chr8	144853539	144853640	(284996)	C	LTR54	LTR/ERV1	(391)	107	1	4008204
11	22.4	1.9	5.7	chr9	214965	215016	(138179701)	+	(CGCCGCG)n	Simple_repeat	1	53	(0)	4008802
12	4.5	4.0	3.9	chr9	2621364	2621388	(135773329)	+	(CTG)n	Simple_repeat	1	26	(0)	4012375
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
12	12.6	0.0	3.6	chr9	6413413	6413440	(131981277)	+	(GCGGC)n	Simple_repeat	1	28	(0)	4017979
24	9.0	1.9	5.6	chr9	10612946	10612998	(127781719)	+	(CGCT)n	Simple_repeat	1	54	(0)	4024012
6092	12.7	7.6	2.9	chr9	12955572	12956576	(125438141)	C	L1PBa	LINE/L1	(5741)	1122	56	4026968
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
1886	9.6	4.9	0.4	chr9	19375043	19375293	(119019424)	C	AluSx	SINE/Alu	(9)	303	41	4036210
506	27.3	12.4	1.9	chr9	21812819	21813027	(116581690)	+	MIR	SINE/MIR	4	237	(25)	4039746
2658	17.3	5.8	0.6	chr9	27880675	27881162	(110513555)	C	MLT2B2	LTR/ERVL	(0)	515	1	4047795
2468	17.7	4.6	2.7	chr9	32097180	32097667	(106297050)	+	MLT2B4	LTR/ERVL	1	498	(58)	4053237
2472	5.3	1.6	0.3	chr9	33076868	33077171	(105317546)	+	AluSp	SINE/Alu	2	309	(4)	4054715
21	3.7	0.0	0.0	chr9	33817729	33817756	(104576961)	+	(CCG)n	Simple_repeat	1	28	(0)	4056034
20	6.9	0.0	0.0	chr9	35072557	35072587	(103322130)	+	(GGCAGC)n	Simple_repeat	1	31	(0)	4058317
16	14.2	0.0	0.0	chr9	35665364	35665394	(102729323)	+	(GCAGG)n	Simple_repeat	1	31	(0)	4059258
46	31.5	1.2	1.1	chr9	62799504	62799676	(75595041)	+	GA-rich	Low_complexity	1	175	(0)	4073670
14	10.0	6.2	0.0	chr9	69035827	69035858	(69358859)	+	(ACCCAG)n	Simple_repeat	1	34	(0)	4080839
5015	9.7	0.9	0.2	chr9	69306939	69307567	(69087150)	C	MER41B	LTR/ERV1	(0)	634	1	4081410
11	13.8	2.8	5.4	chr9	70258925	70258960	(68135757)	+	(GCGCGA)n	Simple_repeat	1	37	(0)	4082831
5524	10.8	1.8	4.2	chr9	71920843	71921736	(66472981)	+	MER4D0	LTR/ERV1	1	872	(0)	4085517
2338	9.8	0.3	0.0	chr9	74092100	74092394	(64302323)	+	AluSg4	SINE/Alu	1	296	(14)	4088924
4825	13.3	6.7	5.1	chr9	74092395	74092825	(64301892)	+	MER4D	LTR/ERV1	476	895	(8)	4088923
341	19.5	5.4	0.0	chr9	74094043	74094136	(64300581)	+	L1M5	LINE/L1	5743	5841	(338)	4088928
2083	14.0	4.2	1.6	chr9	74094144	74094514	(64300203)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	4088929
394	32.2	0.0	0.0	chr9	74314927	74315041	(64079676)	C	L2c	LINE/L2	(1331)	2088	1974	4089219
2824	16.0	5.6	1.9	chr9	74315046	74315541	(64079176)	+	MLT2B4	LTR/ERVL	1	520	(36)	4089220
570	26.2	9.0	2.5	chr9	78295991	78296229	(60098488)	+	Charlie16a	DNA/hAT-Charlie	87	342	(0)	4095557
238	31.1	1.9	3.6	chr9	78296325	78296434	(60098283)	C	MIR3	SINE/MIR	(6)	202	95	4095558
330	21.0	11.8	9.3	chr9	81689313	81689527	(56705190)	C	MER52D	LTR/ERV1	(1852)	271	51	4100305
180	18.2	0.0	0.0	chr9	83623330	83623362	(54771355)	C	MIR3	SINE/MIR	(60)	148	116	4103206
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
1164	9.5	0.0	0.0	chr9	83965530	83965676	(54429041)	C	AluSq	SINE/Alu	(19)	294	148	4103842
1634	13.5	7.2	0.4	chr9	83966289	83966548	(54428169)	C	AluJb	SINE/Alu	(28)	284	6	4103845
342	20.2	2.7	11.4	chr9	87421747	87421817	(50972900)	C	LTR16A2	LTR/ERVL	(51)	444	382	4109447
343	30.6	7.5	4.2	chr9	87421818	87422295	(50972422)	+	L2c	LINE/L2	2893	3387	(0)	4109449
1833	17.0	15.4	3.3	chr9	88063378	88063832	(50330885)	C	MLT2B1	LTR/ERVL	(0)	520	1	4110419
1322	18.6	3.7	5.8	chr9	88987285	88987695	(49407022)	C	MLT2B4	LTR/ERVL	(0)	414	1	4111963
235	16.7	5.3	3.6	chr9	89318128	89318183	(49076534)	+	L2a	LINE/L2	3113	3169	(257)	4112397
640	28.6	7.0	6.2	chr9	93365230	93365368	(45029349)	C	L2a	LINE/L2	(211)	3215	3072	4118046
209	28.2	16.0	1.8	chr9	93365449	93365560	(45029157)	+	MIR3	SINE/MIR	15	145	(63)	4118049
206	25.2	6.6	2.0	chr9	93366689	93366789	(45027928)	C	L2a	LINE/L2	(978)	2441	2336	4118046
2233	9.7	0.0	0.3	chr9	93367297	93367584	(45027133)	C	AluSx1	SINE/Alu	(25)	287	1	4118050
11089	9.0	1.3	0.7	chr9	97216576	97218235	(41176482)	+	HERVH-int	LTR/ERV1	1318	2987	(4726)	4124162
10856	2.4	0.2	0.0	chr9	99498742	99500000	(38894717)	+	L1HS	LINE/L1	2	1262	(4770)	4128585
922	18.3	4.2	0.0	chr9	100135338	100135517	(38259200)	C	MER5A	DNA/hAT-Charlie	(0)	189	2	4129624
1698	21.8	6.0	8.2	chr9	100608655	100609179	(37785538)	C	MLT2B3	LTR/ERVL	(40)	514	2	4130465
263	29.4	16.3	6.1	chr9	100609207	100609518	(37785199)	C	L2	LINE/L2	(1646)	1773	1424	4130463
16	26.6	0.0	2.0	chr9	111631460	111631510	(26763207)	+	(GCT)n	Simple_repeat	1	51	(0)	4148269
26	6.6	1.9	5.6	chr9	113349586	113349638	(25045079)	+	(GCCGGG)n	Simple_repeat	1	54	(0)	4151480
1996	12.6	4.3	3.5	chr9	114314310	114314694	(24080023)	C	MLT2B4	LTR/ERVL	(52)	362	1	4153390
309	32.0	7.7	2.6	chr9	114314702	114314896	(24079821)	C	L2c	LINE/L2	(261)	3126	2926	4153391
1999	18.8	9.4	4.0	chr9	115479905	115480408	(22914309)	C	MLT2B4	LTR/ERVL	(5)	551	18	4155656
2049	10.6	3.8	1.1	chr9	115480420	115480703	(22914014)	+	AluSq2	SINE/Alu	5	296	(17)	4155657
2128	6.9	0.7	6.7	chr9	115503917	115504141	(22890576)	+	L1PA13	LINE/L1	5856	6078	(85)	4155693
2206	12.3	0.7	0.7	chr9	115504142	115504451	(22890266)	+	AluSx1	SINE/Alu	3	312	(0)	4155694
9686	11.9	5.1	3.5	chr9	115782501	115784053	(22610664)	+	THE1B-int	LTR/ERVL-MaLR	3	1580	(0)	4156174
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
633	8.8	0.0	0.0	chr9	124857180	124857259	(13537458)	+	AluSq10	SINE/Alu	1	80	(233)	4173404
558	21.9	10.3	5.7	chr9	126203319	126203512	(12191205)	+	MLT1H	LTR/ERVL-MaLR	3	206	(343)	4176041
1815	21.0	14.4	1.0	chr9	126203541	126203979	(12190738)	+	MLT2B4	LTR/ERVL	1	519	(37)	4176042
1772	12.2	0.8	0.0	chr9	127445810	127446047	(10948670)	+	AluSg	SINE/Alu	53	292	(18)	4178226
200	30.9	4.7	1.2	chr9	127451080	127451161	(10943556)	C	MIR3	SINE/MIR	(43)	165	81	4178232
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
196	29.7	10.3	1.5	chr9	128684299	128684493	(9710224)	+	L2	LINE/L2	2561	2774	(645)	4181090
15	8.9	0.0	0.0	chr9	128689232	128689255	(9705462)	+	(AGG)n	Simple_repeat	1	24	(0)	4181103
17	9.7	2.9	2.8	chr9	128689312	128689346	(9705371)	+	(GCC)n	Simple_repeat	1	36	(0)	4181104
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
1245	21.5	2.7	3.7	chr9	128697377	128697674	(9697043)	+	AluJo	SINE/Alu	2	296	(16)	4181117
2025	14.6	0.3	0.3	chr9	128697860	128698160	(9696557)	C	AluSx	SINE/Alu	(11)	301	1	4181118
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
15	17.3	5.2	4.9	chr9	128882181	128882238	(9512479)	+	(CGGC)n	Simple_repeat	1	61	(0)	4181567
19	20.2	7.6	4.4	chr9	129697497	129697601	(8697116)	+	(TGGCGCGC)n	Simple_repeat	1	113	(0)	4183423
1739	14.6	0.4	0.8	chr9	130951420	130951672	(7443045)	+	AluJo	SINE/Alu	2	253	(59)	4186078
12	7.3	2.9	8.3	chr9	132240871	132240905	(6153812)	+	(CGTGCC)n	Simple_repeat	1	36	(0)	4188495
8057	6.7	0.6	0.6	chr9	133328826	133329832	(5064885)	C	LTR13	LTR/ERVK	(0)	1007	1	4190424
2328	7.6	0.0	0.3	chr9	134563100	134563401	(3831316)	C	AluY	SINE/Alu	(9)	302	2	4192183
1204	30.1	6.8	6.3	chr9	134563402	134563507	(3831210)	+	L1M5	LINE/L1	4951	5054	(1092)	4192182
1820	20.4	10.4	8.8	chr9	134563508	134564018	(3830699)	+	MLT2B1	LTR/ERVL	1	520	(0)	4192184
27	0.0	6.1	0.0	chr9	136545985	136546017	(1848700)	+	(CGCGCCC)n	Simple_repeat	1	35	(0)	4194481
13	0.0	0.0	0.0	chr9	137241341	137241357	(1153360)	+	(CCG)n	Simple_repeat	1	17	(0)	4195377
13	11.4	7.5	2.3	chr9	137454316	137454355	(940362)	+	(GCAGCAA)n	Simple_repeat	1	43	(0)	4195655
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
1770	10.1	0.8	0.0	chrX	1381151	1381388	(154659507)	+	AluSq2	SINE/Alu	35	274	(39)	4360863
2218	9.6	0.3	2.3	chrX	1381539	1381841	(154659054)	C	AluSq4	SINE/Alu	(14)	297	1	4360864
1756	11.5	11.3	0.0	chrX	1382757	1383016	(154657879)	C	AluSg	SINE/Alu	(17)	293	1	4360867
2098	11.0	0.7	2.0	chrX	1383017	1383315	(154657580)	C	AluSx	SINE/Alu	(17)	295	1	4360868
2359	18.8	4.7	4.7	chrX	2546245	2546730	(153494165)	C	MLT2B2	LTR/ERVL	(28)	487	2	4363099
180	29.3	4.9	0.0	chrX	2546781	2546838	(153494057)	+	MIRc	SINE/MIR	143	203	(65)	4363100
23	20.0	4.2	2.7	chrX	24150334	24150405	(131890490)	+	(GGC)n	Simple_repeat	1	75	(0)	4398944
1911	21.3	10.8	2.7	chrX	40213234	40213710	(115827185)	+	MLT2B1	LTR/ERVL	1	520	(0)	4421979
14	11.7	8.1	0.0	chrX	40647605	40647641	(115393254)	+	(GCGCCT)n	Simple_repeat	1	40	(0)	4422880
188	22.5	4.8	0.0	chrX	47217597	47217636	(108823259)	+	L2a	LINE/L2	3367	3408	(18)	4433618
19	0.0	0.0	0.0	chrX	48911419	48911439	(107129456)	+	(CA)n	Simple_repeat	1	21	(0)	4437078
2137	9.3	18.8	0.3	chrX	87688451	87688815	(68352080)	+	LTR7	LTR/ERV1	1	448	(2)	4479405
9375	13.7	3.1	4.0	chrX	89052511	89054104	(66986791)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	4480990
2170	10.6	0.3	0.7	chrX	92098637	92098946	(63941949)	C	AluSp	SINE/Alu	(0)	313	1	4484171
3575	15.6	11.2	0.7	chrX	97735358	97736181	(58304714)	C	Arthur1	DNA/hAT-Tip100	(117)	3830	2911	4491153
2700	16.8	4.3	7.6	chrX	97736182	97736710	(58304185)	+	MLT2B2	LTR/ERVL	1	511	(4)	4491157
11890	8.9	1.1	0.1	chrX	102817567	102819130	(53221765)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4497672
1070	28.2	10.0	3.6	chrX	114472534	114473762	(41567133)	+	L1MEd	LINE/L1	1218	2513	(3702)	4514130
30	0.0	0.0	0.0	chrX	114583752	114583777	(41457118)	+	(GT)n	Simple_repeat	1	26	(0)	4514270
18	7.6	0.0	0.0	chrX	114584534	114584561	(41456334)	+	(GCGCA)n	Simple_repeat	1	28	(0)	4514272
364	35.7	12.2	2.1	chrX	114588172	114588414	(41452481)	+	MamTip2	DNA/hAT-Tip100	4	274	(31)	4514274
2228	10.9	1.0	0.0	chrX	119784626	119784919	(36255976)	C	AluSx	SINE/Alu	(15)	297	1	4521827
3947	15.9	7.6	3.1	chrX	122246994	122247854	(33793041)	+	MER4D	LTR/ERV1	1	903	(0)	4525290
2593	13.5	2.6	0.7	chrX	125381997	125382407	(30658488)	C	MSTB	LTR/ERVL-MaLR	(0)	426	8	4530050
583	20.4	2.0	2.0	chrX	125383032	125383181	(30657714)	+	L1MB4	LINE/L1	21	170	(6437)	4530051
1763	17.9	5.4	13.5	chrX	125383178	125383681	(30657214)	C	L1MA6	LINE/L1	(365)	5935	5475	4530052
2286	11.5	0.3	0.0	chrX	125383937	125384232	(30656663)	+	AluSq	SINE/Alu	1	297	(16)	4530055
1237	21.2	17.3	2.2	chrX	125384233	125384495	(30656400)	+	L1MB5	LINE/L1	5833	6156	(18)	4530054
2415	13.7	3.5	0.0	chrX	125384930	125385317	(30655578)	+	MER57B2	LTR/ERV1	1	402	(1)	4530057
350	24.4	4.2	0.7	chrX	133105064	133105199	(22935696)	+	L1MEf	LINE/L1	3441	3581	(2565)	4540339
2000	20.8	5.5	1.4	chrX	133105201	133105635	(22935260)	+	MLT2B1	LTR/ERVL	1	454	(66)	4540341
18	20.3	3.9	0.0	chrX	134520799	134520849	(21520046)	+	(ATTT)n	Simple_repeat	1	53	(0)	4542868
774	15.4	2.5	0.0	chrX	134520851	134520967	(21519928)	C	FLAM_A	SINE/Alu	(22)	120	1	4542869
1684	23.9	10.4	4.4	chrX	134520972	134521429	(21519466)	+	MLT1H1	LTR/ERVL-MaLR	19	525	(30)	4542867
2353	11.9	5.4	0.0	chrY	5946723	5947075	(51280340)	C	MER51B	LTR/ERV1	(4)	373	1	4582921