183	26.2	0.0	0.0	chr1	16122921	16122962	(232833460)	+	MIR3	SINE/MIR	37	78	(130)	26736
322	31.8	21.4	0.7	chr1	16122967	16123240	(232833182)	+	L2c	LINE/L2	2821	3155	(232)	26737
16	7.1	3.1	3.0	chr1	23554882	23554913	(225401509)	+	(GAGCCA)n	Simple_repeat	1	33	(0)	42730
397	30.2	7.7	8.1	chr1	28104936	28105169	(220851253)	C	MIRb	SINE/MIR	(0)	268	36	53251
48	8.0	0.0	0.0	chr1	43530912	43530977	(205425445)	+	(CGGCTC)n	Simple_repeat	1	66	(0)	84463
190	32.1	8.6	5.4	chr1	47588157	47588268	(201368154)	+	Tigger19b	DNA/TcMar-Tigger	216	331	(219)	91923
676	27.9	5.2	4.9	chr1	63714265	63714644	(185241778)	C	MLT1I	LTR/ERVL-MaLR	(8)	403	25	122554
821	18.5	2.0	0.0	chr1	109104807	109104952	(139851470)	C	AluJb	SINE/Alu	(23)	289	141	187996
404	13.2	2.6	8.4	chr1	202959286	202959368	(45997054)	C	AluJo	SINE/Alu	(12)	300	223	298822
239	22.8	8.1	4.8	chr1	202959372	202959454	(45996968)	C	MER105	DNA	(93)	110	25	298819
657	29.7	5.7	0.0	chr1	202959459	202959690	(45996732)	+	MIR	SINE/MIR	15	260	(2)	298823
13	20.8	0.0	0.0	chr1	211328305	211328337	(37628085)	+	(GTTTTT)n	Simple_repeat	1	33	(0)	312508
2139	14.6	3.2	0.0	chr1	222777897	222778232	(26178190)	+	Tigger3a	DNA/TcMar-Tigger	2	348	(0)	329661
33	12.3	0.0	0.0	chr1	240092724	240092785	(8863637)	+	(GCA)n	Simple_repeat	1	62	(0)	357138
369	27.0	10.3	6.5	chr10	80612360	80612573	(53184849)	C	MLT1H	LTR/ERVL-MaLR	(164)	385	163	491511
240	36.9	4.3	3.7	chr10	91211705	91211867	(42585555)	C	L2	LINE/L2	(337)	3082	2919	506985
610	30.6	3.9	7.0	chr10	91211895	91212162	(42585260)	+	MIR	SINE/MIR	8	260	(2)	506986
13	18.6	2.6	0.0	chr10	129950037	129950070	(3847352)	+	G-rich	Low_complexity	4	38	(0)	568917
28	24.9	5.9	0.9	chr11	46120810	46120911	(88965711)	+	GA-rich	Low_complexity	1	108	(0)	643310
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
1028	15.1	0.7	0.0	chr11	93783854	93783999	(41302623)	C	AluJb	SINE/Alu	(21)	291	145	716166
40	7.7	0.0	0.0	chr12	6778328	6778382	(126496927)	+	(CCGGAG)n	Simple_repeat	1	55	(0)	789363
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
236	35.4	8.8	3.4	chr13	44218549	44218785	(70145543)	C	L3	LINE/CR1	(793)	3306	3056	1029946
861	15.6	0.0	0.0	chr14	23105246	23105367	(83938351)	C	AluJr4	SINE/Alu	(189)	123	2	1132287
872	21.7	2.9	7.8	chr14	29805529	29805783	(77237935)	C	MIR	SINE/MIR	(0)	262	21	1140999
188	24.6	14.7	3.6	chr14	34699826	34699964	(72343754)	+	L2c	LINE/L2	2819	2975	(444)	1148459
231	34.0	9.0	6.4	chr14	34700043	34700246	(72343472)	+	L2c	LINE/L2	3092	3301	(86)	1148459
30	7.5	0.0	0.0	chr14	61188412	61188453	(45855265)	+	(GGCTCC)n	Simple_repeat	1	42	(0)	1186116
3849	28.2	1.6	1.1	chr14	73712619	73713668	(33330050)	C	MamGyp-int	LTR/Gypsy	(3972)	1131	76	1206930
247	22.0	0.0	0.3	chr14	90331510	90331569	(16712149)	C	MIRc	SINE/MIR	(62)	168	110	1233689
856	18.9	2.9	11.0	chr14	91493285	91493511	(15550207)	+	AluJo	SINE/Alu	85	292	(20)	1235786
578	13.5	0.0	0.0	chr14	91493512	91493585	(15550133)	+	AluJr	SINE/Alu	1	74	(238)	1235787
6323	23.3	1.0	1.9	chr15	49225624	49226525	(52764664)	C	L1P4a	LINE/L1	(5596)	907	7	1305992
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
52	21.8	0.8	0.8	chr15	75208198	75208326	(26782863)	+	(CCAGCT)n	Simple_repeat	1	129	(0)	1350402
1984	16.4	0.0	1.0	chr16	22232225	22232529	(68105816)	C	AluJr	SINE/Alu	(10)	302	1	1439603
13	20.1	0.0	6.5	chr16	30395398	30395443	(59942902)	+	(GCCCCC)n	Simple_repeat	1	46	(0)	1457927
36	22.9	3.0	3.7	chr16	66427300	66427430	(23910915)	+	(GCCGGA)n	Simple_repeat	1	135	(0)	1499718
45	30.6	0.0	0.0	chr16	67174779	67174918	(23163427)	+	(GAGCCA)n	Simple_repeat	1	140	(0)	1501217
49	3.9	0.0	0.0	chr16	67416368	67416420	(22921925)	+	(GCTCCG)n	Simple_repeat	1	53	(0)	1501597
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
1777	15.1	2.7	2.7	chr17	32128466	32128764	(51128677)	C	AluJb	SINE/Alu	(11)	301	3	1596130
2256	12.7	0.0	0.0	chr17	59828835	59829142	(23428299)	+	AluSz	SINE/Alu	2	309	(3)	1648042
13	4.5	4.3	0.0	chr17	67671680	67671702	(15585739)	+	(CCAG)n	Simple_repeat	1	24	(0)	1662526
419	28.9	8.3	2.9	chr17	76365453	76365623	(6891818)	+	MER77B	LTR/ERVL	38	218	(482)	1677912
586	12.9	0.0	0.0	chr17	76365645	76365729	(6891712)	+	AluJo	SINE/Alu	214	298	(14)	1677913
1114	18.2	2.6	0.0	chr17	76365732	76365918	(6891523)	+	AluJr	SINE/Alu	120	311	(1)	1677914
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
13	13.5	6.1	0.0	chr19	1280534	1280566	(57337050)	+	(CTCTGT)n	Simple_repeat	1	35	(0)	1798493
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
2116	6.1	4.8	0.4	chr19	16734271	16734548	(41883068)	+	AluY	SINE/Alu	5	295	(16)	1834615
1525	18.6	7.0	0.0	chr19	16734565	16734734	(41882882)	C	AluJr	SINE/Alu	(0)	312	137	1834616
239	40.5	3.0	0.9	chr19	46616967	46617195	(12000421)	C	L2c	LINE/L2	(221)	3166	2933	1884117
16	10.8	0.0	3.1	chr19	56403838	56403869	(2213747)	+	(GAGAAA)n	Simple_repeat	1	32	(0)	1905745
44	3.1	2.7	5.3	chr19	57487527	57487600	(1130016)	+	(ATCTCC)n	Simple_repeat	1	76	(0)	1907880
187	14.4	7.0	0.4	chr19	57499312	57499737	(1117879)	+	(CTCCAT)n	Simple_repeat	1	456	(0)	1907898
25	14.2	1.7	3.4	chr2	212540674	212540731	(29652798)	+	(TTTCT)n	Simple_repeat	1	59	(0)	2217081
1192	29.1	12.5	1.7	chr20	406838	407578	(64036589)	C	L2a	LINE/L2	(0)	3426	2581	2262879
245	32.2	11.9	1.7	chr20	407651	407824	(64036343)	+	MIRb	SINE/MIR	3	196	(72)	2262880
76	16.9	4.0	1.1	chr20	407889	408064	(64036103)	+	(CCGGCC)n	Simple_repeat	1	183	(0)	2262881
22	24.3	0.0	1.6	chr20	25247981	25248041	(39196126)	+	(CCCGC)n	Simple_repeat	1	61	(0)	2301899
19	21.9	3.0	2.9	chr20	34876660	34876726	(29567441)	+	(GGAGCG)n	Simple_repeat	1	69	(0)	2314031
2092	14.6	0.0	0.0	chr21	42830626	42830926	(3879057)	C	AluSx1	SINE/Alu	(9)	303	3	2419404
196	34.7	11.7	1.1	chr21	42830938	42831112	(3878871)	+	MIRb	SINE/MIR	35	230	(38)	2419405
1862	16.6	0.5	3.0	chr22	37592160	37592541	(13225927)	+	L1MB4	LINE/L1	5787	6140	(40)	2467600
719	11.3	1.0	0.0	chr22	37592564	37592660	(13225808)	C	AluSx3	SINE/Alu	(32)	279	182	2467605
848	26.0	10.1	6.3	chr22	40651456	40651837	(10166631)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	197	2474016
27	13.9	3.6	0.0	chr3	56468325	56468380	(141827179)	+	(GGAGCC)n	Simple_repeat	1	58	(0)	2582184
2089	15.1	1.0	0.6	chr3	61664550	61664860	(136630699)	+	AluJb	SINE/Alu	1	312	(0)	2591025
1921	18.1	0.0	0.7	chr3	94024589	94024887	(104270672)	C	AluJb	SINE/Alu	(15)	297	1	2633723
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
714	27.3	14.5	0.9	chr3	171790571	171790903	(26504656)	+	MLT1J	LTR/ERVL-MaLR	127	512	(0)	2745087
343	12.0	0.0	0.0	chr3	192888896	192888945	(5406614)	C	Alu	SINE/Alu	(26)	275	226	2778624
2763	17.9	12.4	5.4	chr4	85796543	85797155	(104417400)	C	LTR41	LTR/ERVL	(1)	767	101	2913002
793	23.2	12.7	0.0	chr4	147526239	147526471	(42688084)	C	MLT1H1	LTR/ERVL-MaLR	(28)	527	261	2995722
294	28.5	14.8	2.0	chr4	147526503	147526649	(42687906)	C	MLT1H1	LTR/ERVL-MaLR	(386)	169	1	2995722
798	29.6	0.9	0.5	chr5	16919444	16919657	(164618602)	+	MIR	SINE/MIR	34	248	(14)	3075775
515	26.5	5.5	4.2	chr5	59222980	59223121	(122315138)	C	7SK	RNA	(178)	153	10	3129232
13	30.8	0.0	3.2	chr5	66144565	66144627	(115393632)	+	G-rich	Low_complexity	1	63	(0)	3139020
27	19.2	4.4	5.9	chr5	77630146	77630258	(103908001)	+	G-rich	Low_complexity	1	118	(0)	3156916
526	24.7	14.8	0.5	chr5	79475087	79475306	(102062953)	C	MIR	SINE/MIR	(4)	258	2	3159801
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
667	22.5	4.7	0.0	chr5	107505884	107506025	(74032234)	C	MIR	SINE/MIR	(112)	150	2	3196429
16	0.0	0.0	0.0	chr5	142325276	142325292	(39212967)	+	(T)n	Simple_repeat	1	17	(0)	3245723
24	26.9	0.0	0.0	chr5	179550600	179550667	(1987592)	+	G-rich	Low_complexity	1	68	(0)	3311066
740	29.4	16.2	1.8	chr6	7390376	7391068	(163414911)	C	L2b	LINE/L2	(7)	3368	2559	3325059
645	24.9	1.2	1.2	chr6	12529467	12529637	(158276342)	C	MER5A	DNA/hAT-Charlie	(0)	189	19	3332827
26	17.1	3.4	0.0	chr6	16761548	16761606	(154044373)	+	(CGCT)n	Simple_repeat	1	61	(0)	3340018
11	24.1	0.0	0.0	chr6	70413295	70413328	(100392651)	+	(AGCTGG)n	Simple_repeat	1	34	(0)	3419174
13	11.2	4.5	6.5	chr6	99520982	99521025	(71284954)	+	(GCCGGAG)n	Simple_repeat	1	46	(0)	3457774
17	13.2	0.0	2.9	chr6	99521007	99521041	(71284938)	+	GA-rich	Low_complexity	1	35	(0)	3457775
422	24.7	7.6	3.1	chr7	2400375	2400537	(156945436)	+	MIRb	SINE/MIR	37	207	(61)	3561326
1982	10.0	0.7	1.1	chr7	99993864	99994132	(59351841)	+	AluSx	SINE/Alu	1	268	(44)	3705619
860	12.4	0.0	0.0	chr7	102464182	102464302	(56881671)	C	AluJo	SINE/Alu	(0)	312	192	3711067
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
11	21.3	4.4	2.1	chr8	47188861	47188905	(97949731)	+	(CCGCCA)n	Simple_repeat	1	47	(0)	3861572
3247	14.5	4.3	1.9	chr8	102871928	102872467	(42266169)	C	MER21A	LTR/ERVL	(0)	931	378	3941267
258	25.9	6.6	2.3	chr8	102872462	102872548	(42266088)	C	MER39B	LTR/ERV1	(292)	361	271	3941268
1614	10.3	8.3	0.0	chr8	102872475	102872716	(42265920)	C	MER21A	LTR/ERVL	(667)	264	1	3941269
16	18.8	1.9	5.5	chr8	143840975	143841028	(1297608)	+	G-rich	Low_complexity	1	55	(0)	4006733
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
17	13.2	0.0	2.9	chr9	68780223	68780257	(69614460)	+	(CGG)n	Simple_repeat	1	35	(0)	4080421
288	19.8	9.0	0.0	chr9	105698127	105698207	(32696510)	+	MLT1N2	LTR/ERVL-MaLR	463	551	(11)	4137940
19	14.9	0.0	0.0	chr9	127424461	127424497	(10970220)	+	(GTTGCCA)n	Simple_repeat	1	37	(0)	4178181
238	27.2	6.1	3.2	chr9	131735482	131735576	(6659141)	+	L2b	LINE/L2	3272	3369	(6)	4187581
21	31.5	2.9	0.9	chr9	136730114	136730216	(1664501)	+	(GCTGGA)n	Simple_repeat	1	106	(0)	4194721
48	5.6	0.0	0.0	chrX	72238944	72239000	(83801895)	+	(GGAGCTT)n	Simple_repeat	1	57	(0)	4462954
2135	26.6	9.4	8.5	chrX	124693037	124694499	(31346396)	C	L1MC4	LINE/L1	(4649)	1566	85	4529046